Citrus Sinensis ID: 017760

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Local Sequence Feature Prediction

Residue Number Marker
--------10--------20--------30--------40--------50--------60--------70--------80--------90-------100-------110-------120-------130-------140-------150-------160-------170-------180-------190-------200-------210-------220-------230-------240-------250-------260-------270-------280-------290-------300-------310-------320-------330-------340-------350-------360------
Protein Sequence
MHLSENEGIEGKTFLVTGGLGHVGSALCLELVRRGAYQVRAFDLRTNSPWSHLLINHGVHCIQGLRKNNRKCLYTCAVRPAAIYGPGEERHLPRIVSLAKLGLVPFKIGEPSVKTDWIYVDNLVLALILASMGLLDDIPGQKGRPIASGQPYFVSDGFPINTFEFIGPLLKTLDYDLPKSWLAVPHALFLGKVFSFFYSVLYPWLNRWWLPQPLILPAEVYKVGVTHYFSLLKAKDELCYVPIVSPREGMAATISYWQDRKRKSLDGPTIYAWLFCLIGLPALFATAYLPDIGPVPILRTIGLFIFKSMWMMRLAFAIAVSAHVSEGVFAWCLAKKVDPANAKGWFWQTLALGVFSLRLLLKRARK
Secondary Structure (PSIPRED)
cccHHHccccccEEEEEccccEEEcccccccccccccccccccccccccccHHHHHHHHHHHHHHHHcccccEEEEEEEccccccccccccHHHHHHHHHcccccEEEcccccEEEcccHHHHHHHHHHHHHcccccccccccccccccccEEEEccccccHHHHHHHHHHHcccccccccccHHHHHHHHHHHHHHHHHHHHHHcccccccccccHHHHHHHcccccccHHHHHHHccccccccHHHHHHHHHHHHHHccccccccccHHHHHHHHHHHHHHHHHHHHcccccHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHccccccHHHHHHHHHHHHHHHHHHHHHHHc
Secondary Structure Prediction (SSPRO)
ccccccccccccEEEEEccccHHHHHHHHHHHcccccccccccccccccccHHHHHHHHHHHHHHHHcccccEEEEEEccccccccccccHHHHHHHHHHcccEEEEEcccccccccEEHHHHHHHHHHHHHHHcccccccccccccccEEEEEEccccccHHHHHHHHHHHcccccccccccccHHHHHHHHHHHHHHHHHHHHcHHcccccccccEEEEEEcccEEEcHHHHHHHHcccccccHHHHHHHHHHHHHHHHHHHccccHHHHHHHHHHHHHHHHHHHHccccccHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHccHHHHHHHHHHHHHHHHHHHHHHHHHHcc
Coil and Loop (DISEMBL)
mhlsenegiegktflvtgglghvGSALCLELVRRGAYqvrafdlrtnspwshlLINHGVHCiqglrknnrkclytcavrpaaiygpgeerhlpRIVSLAklglvpfkigepsvktdwiYVDNLVLALILASMgllddipgqkgrpiasgqpyfvsdgfpintfefIGPLlktldydlpkswlavphalFLGKVFSFFYSVLYpwlnrwwlpqplilpaevyKVGVTHYFSLLKakdelcyvpivspregmAATISYWQDrkrksldgptIYAWLFCLIGlpalfataylpdigpvpiLRTIGLFIFKSMWMMRLAFAIAVSAHVSEGVFAWCLakkvdpanakgWFWQTLALGVFSLRLLLKRARK
Flexible Loop (DISEMBL)
mhlsenegiegKTFLVTGGLGHVGSALCLELVRRGAYQVRAFDLRTNSPWSHLLINHGVHCIQGLRKNNRKCLYTCAVRPAAiygpgeerhLPRIVSLAKLGLVPFKIGEPSVKTDWIYVDNLVLALILASMGLLDDIPGQKGRPIASGQPYFVSDGFPINTFEFIGPLLKTLDYDLPKSWLAVPHALFLGKVFSFFYSVLYPWLNRWWLPQPLILPAEVYKVGVTHYFSLLKAKDELCYVPIVSPREGMAATISYWQDRKRKSLDGPTIYAWLFCLIGLPALFATAYLPDIGPVPILRTIGLFIFKSMWMMRLAFAIAVSAHVSEGVFAWCLAKKVDPANAKGWFWQTLALGVFSLRLLLKRARK
Low Complexity Region (SEG)
MHLSENEGIEGKTFLVTGGLGHVGSALCLELVRRGAYQVRAFDLRTNSPWSHLLINHGVHCIQGLRKNNRKCLYTCAVRPAAIYGPGEERHLPRIVSLAKLGLVPFKIGEPSVKTDWIYVDNLVLALILASMGLLDDIPGQKGRPIASGQPYFVSDGFPINTFEFIGPLLKTLDYDLPKSWLAVPHALFLGKVFSFFYSVLYPWLNRWWLPQPLILPAEVYKVGVTHYFSLLKAKDELCYVPIVSPREGMAATISYWQDRKRKSLDGPTIYAWLFCLIGLPALFATAYLPDIGPVPILRTIGLFIFKSMWMMRLAFAIAVSAHVSEGVFAWCLAKKVDPANAKGWFWQTLALGVFSLRLLLKRARK
Disordered region (IsUnstruct)
**********GKTFLVTGGLGHVGSALCLELVRRGAYQVRAFDLRTNSPWSHLLINHGVHCIQGLRKNNRKCLYTCAVRPAAIYGPGEERHLPRIVSLAKLGLVPFKIGEPSVKTDWIYVDNLVLALILASMGLLDDIPGQKGRPIASGQPYFVSDGFPINTFEFIGPLLKTLDYDLPKSWLAVPHALFLGKVFSFFYSVLYPWLNRWWLPQPLILPAEVYKVGVTHYFSLLKAKDELCYVPIVSPREGMAATISYWQDRKRKSLDGPTIYAWLFCLIGLPALFATAYLPDIGPVPILRTIGLFIFKSMWMMRLAFAIAVSAHVSEGVFAWCLAKKVDPANAKGWFWQTLALGVFSLRLLL*****
Disordered Region (DISOPRED)
*******GIEGKTFLVTGGLGHVGSALCLELVRRGAYQVRAFDLRTNSPWSHLLINHGVHCIQGLRKNNRKCLYTCAVRPAAIYGPGEERHLPRIVSLAKLGLVPFKIGEPSVKTDWIYVDNLVLALILASMGLLDD****KGRPIASGQPYFVSDGFPINTFEFIGPLLKTLDYDLPKSWLAVPHALFLGKVFSFFYSVLYPWLNRWWLPQPLILPAEVYKVGVTHYFSLLKAKDELCYVPIVSPREGMAATISYWQDRKR***DGPTIYAWLFCLIGLPALFATAYLPDIGPVPILRTIGLFIFKSMWMMRLAFAIAVSAHVSEGVFAWCLAKKVDPANAKGWFWQTLALGVFSLRLLLKRA**
Disordered Region (DISEMBL)
********IEGKTFLVTGGLGHVGSALCLELVRRGAYQVRAFDLRTNSPWSHLLINHGVHCIQGLRKNNRKCLYTCAVRPAAIYGPGEERHLPRIVSLAKLGLVPFKIGEPSVKTDWIYVDNLVLALILASMGLLDDIPGQKGRPIASGQPYFVSDGFPINTFEFIGPLLKTLDYDLPKSWLAVPHALFLGKVFSFFYSVLYPWLNRWWLPQPLILPAEVYKVGVTHYFSLLKAKDELCYVPIVSPREGMAATISYWQDRKRKSLDGPTIYAWLFCLIGLPALFATAYLPDIGPVPILRTIGLFIFKSMWMMRLAFAIAVSAHVSEGVFAWCLAKKVDPANAKGWFWQTLALGVFSLRLLLKRARK
Disordered Region (DISPRO)
********IEGKTFLVTGGLGHVGSALCLELVRRGAYQVRAFDLRTNSPWSHLLINHGVHCIQGLRKNNRKCLYTCAVRPAAIYGPGEERHLPRIVSLAKLGLVPFKIGEPSVKTDWIYVDNLVLALILASMGLLDDIPGQKGRPIASGQPYFVSDGFPINTFEFIGPLLKTLDYDLPKSWLAVPHALFLGKVFSFFYSVLYPWLNRWWLPQPLILPAEVYKVGVTHYFSLLKAKDELCYVPIVSPREGMAATISYWQDRKRKSLDGPTIYAWLFCLIGLPALFATAYLPDIGPVPILRTIGLFIFKSMWMMRLAFAIAVSAHVSEGVFAWCLAKKVDPANAKGWFWQTLALGVFSLRLLLKRAR*
Transmembrane Helix (TMHMM)
oooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooHHHHHHHHHHHHHHHHHHHHiiiiiiiiiiiiHHHHHHHHHHHHHHHHHHHHHHHoooooooooooooooooooHHHHHHHHHHHHHHHHHHiiiii
Transmembrane Helix (HMMTOP)
ooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooHHHHHHHHHHHHHHHHHHHiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiHHHHHHHHHHHHHHHHHHHooooooooooooooooooooooooooHHHHHHHHHHHHHHHHHHHHiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiii
Transmembrane Helix (MEMSAT)
ooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooHHHHHHHHHHHHHHHHHHHHiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiHHHHHHHHHHHHHHHHHHHHoooooooooooooooooooHHHHHHHHHHHHHHHHHHHHHHHiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiii
TM Helix, Signal Peptide (MEMSAT_SVM)
ooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooHHHHHHHHHHHHHHHHHHHHHiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiHHHHHHHHHHHHHHHHHHHHHHHHHHHoooHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHiiiiiiiiiiiiiiiHHHHHHHHHHHHHHHHooooo
TM Helix, Signal Peptide (Phobius)
ooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooHHHHHHHHHHHHHHHHHHHiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiHHHHHHHHHHHHHHHHHHHHHHHHHooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooHHHHHHHHHHHHHHHHHHHHiiiiiiiiiiiHHHHHHHHHHHHHHHHHHHHHHHHoooooooooooooooooooHHHHHHHHHHHHHHHHHHiiiii
Signal Peptide (SignalP HMM Mode)
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Signal Peptide (SignalP NN Mode)
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Coiled Coils (COILS)
MHLSENEGIEGKTFLVTGGLGHVGSALCLELVRRGAYQVRAFDLRTNSPWSHLLINHGVHCIQGLRKNNRKCLYTCAVRPAAIYGPGEERHLPRIVSLAKLGLVPFKIGEPSVKTDWIYVDNLVLALILASMGLLDDIPGQKGRPIASGQPYFVSDGFPINTFEFIGPLLKTLDYDLPKSWLAVPHALFLGKVFSFFYSVLYPWLNRWWLPQPLILPAEVYKVGVTHYFSLLKAKDELCYVPIVSPREGMAATISYWQDRKRKSLDGPTIYAWLFCLIGLPALFATAYLPDIGPVPILRTIGLFIFKSMWMMRLAFAIAVSAHVSEGVFAWCLAKKVDPANAKGWFWQTLALGVFSLRLLLKRARK
Positional Conservation
no confident homologs detected

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Close Homologs for Annotation Transfer

Close Homologs in SWISS-PROT Database Detected by BLAST

Original result of BLAST against SWISS-PROT Database

ID	Length	Definition	RBH(Q2H)	RBH(H2Q)	Q cover	H cover	Identity	E-value
Query	366	2.2.26 [Sep-21-2011]
Q8WUS8	393	Short-chain dehydrogenase	yes	no	0.434	0.404	0.523	3e-37
Q4R7R1	393	Short-chain dehydrogenase	N/A	no	0.434	0.404	0.523	4e-37
Q32L94	393	Short-chain dehydrogenase	yes	no	0.434	0.404	0.505	5e-36
A8DZE7	387	Short-chain dehydrogenase	yes	no	0.453	0.428	0.451	2e-35
Q9D665	394	Short-chain dehydrogenase	yes	no	0.456	0.423	0.477	5e-35
Q0IH73	386	Short-chain dehydrogenase	N/A	no	0.442	0.419	0.427	5e-31
A6NKP2	422	Putative short-chain dehy	no	no	0.437	0.379	0.387	3e-24
Q9FX01	439	3beta-hydroxysteroid-dehy	no	no	0.527	0.439	0.32	2e-22
Q67ZE1	564	3beta-hydroxysteroid-dehy	no	no	0.540	0.351	0.302	2e-20
O53454	370	3 beta-hydroxysteroid deh	yes	no	0.480	0.475	0.295	2e-18

>sp|Q8WUS8|D42E1_HUMAN Short-chain dehydrogenase/reductase family 42E member 1 OS=Homo sapiens GN=SDR42E1 PE=2 SV=2

 Score =  156 bits (394), Expect = 3e-37,   Method: Compositional matrix adjust.
 Identities = 88/168 (52%), Positives = 107/168 (63%), Gaps = 9/168 (5%)

Query: 73  LYTCAVRPAAIYGPGEERHLPRIVSLAKLGLVPFKIGEPSVKTDWIYVDNLVLALILASM 132
           L TCA+RPA IYGPGE+RHLPRIVS  + GL  F  G+P    ++++VDNLV A ILAS 
Sbjct: 178 LRTCALRPAGIYGPGEQRHLPRIVSYIEKGLFKFVYGDPRSLVEFVHVDNLVQAHILASE 237

Query: 133 GLLDDIPGQKGRPIASGQPYFVSDGFPINTFEFIGPLLKTLDYDLPKSWLAVPHALFLGK 192
            L  D    KG  IASGQPYF+SDG P+N FEF  PL++ L Y  P + L     L L  
Sbjct: 238 ALRAD----KGH-IASGQPYFISDGRPVNNFEFFRPLVEGLGYTFPSTRL----PLTLVY 288

Query: 193 VFSFFYSVLYPWLNRWWLPQPLILPAEVYKVGVTHYFSLLKAKDELCY 240
            F+F   +++  L R +  QP +   EVYK GVTHYFSL KAK EL Y
Sbjct: 289 CFAFLTEMVHFILGRLYNFQPFLTRTEVYKTGVTHYFSLEKAKKELGY 336

Homo sapiens (taxid: 9606)
EC: 1EC: .EC: 1EC: .EC: 1EC: .EC: -

>sp|Q4R7R1|D42E1_MACFA Short-chain dehydrogenase/reductase family 42E member 1 OS=Macaca fascicularis GN=SDR42E1 PE=2 SV=1

 Score =  155 bits (393), Expect = 4e-37,   Method: Compositional matrix adjust.
 Identities = 88/168 (52%), Positives = 107/168 (63%), Gaps = 9/168 (5%)

Query: 73  LYTCAVRPAAIYGPGEERHLPRIVSLAKLGLVPFKIGEPSVKTDWIYVDNLVLALILASM 132
           L TCA+RPA IYGPGE+RHLPRIVS  + GL  F  G+P    ++++VDNLV A ILAS 
Sbjct: 178 LRTCALRPAGIYGPGEQRHLPRIVSYIEKGLFKFVYGDPRSLVEFVHVDNLVQAHILASE 237

Query: 133 GLLDDIPGQKGRPIASGQPYFVSDGFPINTFEFIGPLLKTLDYDLPKSWLAVPHALFLGK 192
            L  D    KG  IASGQPYF+SDG P+N FEF  PL++ L Y  P + L     L L  
Sbjct: 238 ALRAD----KGH-IASGQPYFISDGRPVNNFEFFRPLVEGLGYTFPSTRL----PLTLVY 288

Query: 193 VFSFFYSVLYPWLNRWWLPQPLILPAEVYKVGVTHYFSLLKAKDELCY 240
            F+F   +++  L R +  QP +   EVYK GVTHYFSL KAK EL Y
Sbjct: 289 CFAFLTEMVHFILGRLYNFQPFLTRTEVYKTGVTHYFSLEKAKKELGY 336

Macaca fascicularis (taxid: 9541)

EC: 1

EC: .

EC: 1

EC: .

EC: 1

EC: .

EC: -

>sp|Q32L94|D42E1_BOVIN Short-chain dehydrogenase/reductase family 42E member 1 OS=Bos taurus GN=SDR42E1 PE=2 SV=2

 Score =  152 bits (383), Expect = 5e-36,   Method: Compositional matrix adjust.
 Identities = 85/168 (50%), Positives = 105/168 (62%), Gaps = 9/168 (5%)

Query: 73  LYTCAVRPAAIYGPGEERHLPRIVSLAKLGLVPFKIGEPSVKTDWIYVDNLVLALILASM 132
           L TCA+RPA IYGPGE+RHLPRIVS  + GL  F  G+P    ++++VDNLV A ILAS 
Sbjct: 178 LSTCALRPAGIYGPGEQRHLPRIVSYIEKGLFRFVYGDPKSLVEFVHVDNLVQAHILASE 237

Query: 133 GLLDDIPGQKGRPIASGQPYFVSDGFPINTFEFIGPLLKTLDYDLPKSWLAVPHALFLGK 192
            L       KG  IA+GQPYF+SDG P+N FEF  PL++ L Y  P + L     L L  
Sbjct: 238 AL----KANKGH-IAAGQPYFISDGRPVNNFEFFRPLVEGLGYKFPSTRL----PLTLIY 288

Query: 193 VFSFFYSVLYPWLNRWWLPQPLILPAEVYKVGVTHYFSLLKAKDELCY 240
            F+F   + +  L R +  QP +   EVYK GVTHYFSL KA+ EL Y
Sbjct: 289 CFAFLTEMTHFILGRLYNFQPFLTRTEVYKTGVTHYFSLEKARKELGY 336

Bos taurus (taxid: 9913)

EC: 1

EC: .

EC: 1

EC: .

EC: 1

EC: .

EC: -

>sp|A8DZE7|D42E1_DANRE Short-chain dehydrogenase/reductase family 42E member 1 OS=Danio rerio GN=sdr42e1 PE=2 SV=1

 Score =  149 bits (377), Expect = 2e-35,   Method: Compositional matrix adjust.
 Identities = 79/175 (45%), Positives = 109/175 (62%), Gaps = 9/175 (5%)

Query: 68  NNRKCLYTCAVRPAAIYGPGEERHLPRIVSLAKLGLVPFKIGEPSVKTDWIYVDNLVLAL 127
           N+   L TCA+RPA IYGPGE+RHLPRIVS  + G+  F  G+P    ++++VDNLV A 
Sbjct: 170 NSTGVLRTCALRPAGIYGPGEQRHLPRIVSYIENGIFRFVYGDPDSLVEFVHVDNLVSAH 229

Query: 128 ILASMGLLDDIPGQKGRPIASGQPYFVSDGFPINTFEFIGPLLKTLDYDLPKSWLAVPHA 187
           +LA+     D   +K +  A+GQ YF+SDG P+N FEF  PL++ L Y  P   L +   
Sbjct: 230 LLAA-----DALTEKQQCRAAGQAYFISDGRPVNNFEFFRPLVEGLGYSFPTLRLPISMI 284

Query: 188 LFLGKVFSFFYSVLYPWLNRWWLPQPLILPAEVYKVGVTHYFSLLKAKDELCYVP 242
            F    F+F   +++  + R +  QPL+   EVYK GVTHYFS+ KA++EL Y P
Sbjct: 285 YF----FAFLTEMVHFVVGRIYNFQPLLTRTEVYKTGVTHYFSMRKAREELGYEP 335

Danio rerio (taxid: 7955)

EC: 1

EC: .

EC: 1

EC: .

EC: 1

EC: .

EC: -

>sp|Q9D665|D42E1_MOUSE Short-chain dehydrogenase/reductase family 42E member 1 OS=Mus musculus GN=Sdr42e1 PE=2 SV=1

 Score =  148 bits (374), Expect = 5e-35,   Method: Compositional matrix adjust.
 Identities = 84/176 (47%), Positives = 105/176 (59%), Gaps = 9/176 (5%)

Query: 67  KNNRKCLYTCAVRPAAIYGPGEERHLPRIVSLAKLGLVPFKIGEPSVKTDWIYVDNLVLA 126
           K     L TCA+RPA IYG GE+RHLPRIVS  + GL  F  G+P    ++++VDNL  A
Sbjct: 173 KQGDGILRTCAIRPAGIYGAGEQRHLPRIVSYIERGLFRFVYGDPQSLVEFVHVDNLAKA 232

Query: 127 LILASMGLLDDIPGQKGRPIASGQPYFVSDGFPINTFEFIGPLLKTLDYDLPKSWLAVPH 186
            ILAS  L  D    KG  +ASGQPYF+SDG P+N FEF  PL++ L Y  P + L    
Sbjct: 233 HILASEALKAD----KGH-VASGQPYFISDGRPVNNFEFFRPLVEGLGYTFPSTRL---- 283

Query: 187 ALFLGKVFSFFYSVLYPWLNRWWLPQPLILPAEVYKVGVTHYFSLLKAKDELCYVP 242
            L L    +F   + +  + R +  QP +   EVYK GVTHYFSL KAK EL + P
Sbjct: 284 PLTLIYCLAFLVEMTHFIVGRLYNFQPFLTRTEVYKTGVTHYFSLEKAKKELGFEP 339

Mus musculus (taxid: 10090)

EC: 1

EC: .

EC: 1

EC: .

EC: 1

EC: .

EC: -

>sp|Q0IH73|D42E1_XENLA Short-chain dehydrogenase/reductase family 42E member 1 OS=Xenopus laevis GN=sdr42e1 PE=2 SV=1

 Score =  135 bits (340), Expect = 5e-31,   Method: Compositional matrix adjust.
 Identities = 77/180 (42%), Positives = 109/180 (60%), Gaps = 18/180 (10%)

Query: 67  KNNRKCLYTCAVRPAAIYGPGEERHLPRIVSLAKLGLVPFKIGEPSVKTDWIYVDNLVLA 126
           KNN   L TC++R A IYGPGE+RHLPRI+S  + G+  F  G+  +   +++VDNL+ A
Sbjct: 170 KNNSGFLRTCSLRAAGIYGPGEQRHLPRIISALEKGMFLFVYGDNPL-VQFVHVDNLISA 228

Query: 127 LILASMGLLDDIPGQKGRPIASGQPYFVSDGFPINTFEFIGPLLKTLDYDLPKSWLAVPH 186
            ILA+  L  +      + IA+GQPYF+SDG P+N FEF  PL++ L Y  P   L  P 
Sbjct: 229 HILAAEALTSE-----KKYIAAGQPYFISDGPPVNNFEFFRPLVEGLGYKFPS--LRFPL 281

Query: 187 ALFLGKVFSFFYSVLYPWLNRWWLP----QPLILPAEVYKVGVTHYFSLLKAKDELCYVP 242
           +L       +F++ L  W++ +  P    QP++  AEV+K GVTHYF + KA  EL + P
Sbjct: 282 SLV------YFFAFLTEWIHFFISPVCDFQPILTRAEVFKTGVTHYFKIEKATRELGFEP 335

Xenopus laevis (taxid: 8355)

EC: 1

EC: .

EC: 1

EC: .

EC: 1

EC: .

EC: -

>sp|A6NKP2|D42E2_HUMAN Putative short-chain dehydrogenase/reductase family 42E member 2 OS=Homo sapiens GN=SDR42E2 PE=3 SV=3

 Score =  113 bits (282), Expect = 3e-24,   Method: Compositional matrix adjust.
 Identities = 67/173 (38%), Positives = 95/173 (54%), Gaps = 13/173 (7%)

Query: 72  CLYTCAVRPAAIYGPGEERHLPRIVSLAKLGLVPFKIGEPSVKTDWIYVDNLVLALILAS 131
            L TC +RP  IYGP E+RHLPR+    K  L  F+ G+   + +W++V NLV A +LA+
Sbjct: 200 TLRTCVLRPPGIYGPEEQRHLPRVAGHIKKRLFMFRFGDHKARMNWVHVHNLVQAHVLAA 259

Query: 132 MGLLDDIPGQKGRPIASGQPYFVSDGFPINTFEFIGPLLKTLDYDLPKSWLAVPHA--LF 189
             L       KG  +ASGQ Y+++DG  +N FE++ PL + L Y  P  W+ VP +    
Sbjct: 260 EALTT----AKGY-VASGQAYYINDGESVNLFEWMAPLFEKLGYSQP--WIQVPTSWVYL 312

Query: 190 LGKVFSFFYSVLYPWLNRWWLPQPLILPAEVYKVGVTHYFSLLKAKDELCYVP 242
              V    +  L P  +   LP PL+  +EV  V VTH F + KA+ +L Y P
Sbjct: 313 TAAVMERLHLALRPICS---LP-PLLTRSEVRSVAVTHTFQIAKARAQLGYAP 361

Homo sapiens (taxid: 9606)

EC: 1

EC: .

EC: 1

EC: .

EC: 1

EC: .

EC: -

>sp|Q9FX01|HSDD1_ARATH 3beta-hydroxysteroid-dehydrogenase/decarboxylase isoform 1 OS=Arabidopsis thaliana GN=3BETAHSD/D1 PE=2 SV=1

 Score =  107 bits (267), Expect = 2e-22,   Method: Compositional matrix adjust.
 Identities = 64/200 (32%), Positives = 108/200 (54%), Gaps = 7/200 (3%)

Query: 65  LRKNNRKCLYTCAVRPAAIYGPGEERHLPRIVSLAKLGLVPFKIGEPSVKTDWIYVDNLV 124
           L+ N R  L TC +RP++I+GPG++  +P +V+ A+ G   F IG+ S   D+ YV+N+V
Sbjct: 173 LKANGRSGLLTCCIRPSSIFGPGDKLMVPSLVTAARAGKSKFIIGDGSNFYDFTYVENVV 232

Query: 125 LALILASMGLLDDIPGQKGRPIASGQPYFVSDGFPINTFEFIGPLLKTLDYDLPKSWLAV 184
            A + A   L     G +    A+GQ YF+++  PI  +EF+  LL+ L Y+ P   + +
Sbjct: 233 HAHVCAERALAS---GGEVCAKAAGQAYFITNMEPIKFWEFMSQLLEGLGYERPS--IKI 287

Query: 185 PHALFLGKVFSFFYSVLYPWLNRWWLPQPLILPAEVYKVGVTHYFSLLKAKDELCYVPIV 244
           P +L +    ++   + Y  L  + +  P++ P+ V  +     F   KAKD L Y P+V
Sbjct: 288 PASLMMP--IAYLVELAYKLLGPYGMKVPVLTPSRVRLLSCNRTFDSSKAKDRLGYSPVV 345

Query: 245 SPREGMAATISYWQDRKRKS 264
             +EG+  TI  +   K ++
Sbjct: 346 PLQEGIKRTIDSFSHLKAQN 365

Arabidopsis thaliana (taxid: 3702)

EC: 1

EC: .

EC: 1

EC: .

EC: 1

EC: .

EC: 1

EC: 7

EC: 0

>sp|Q67ZE1|HSDD2_ARATH 3beta-hydroxysteroid-dehydrogenase/decarboxylase isoform 2 OS=Arabidopsis thaliana GN=3BETAHSD/D2 PE=2 SV=2

 Score =  100 bits (248), Expect = 2e-20,   Method: Compositional matrix adjust.
 Identities = 63/208 (30%), Positives = 105/208 (50%), Gaps = 10/208 (4%)

Query: 65  LRKNNRKCLYTCAVRPAAIYGPGEERHLPRIVSLAKLGLVPFKIGEPSVKTDWIYVDNLV 124
           ++ N R  L TC +RP++I+GPG+   +P +V+ A+ G   F IG+ +   D+ YV+N+ 
Sbjct: 173 MKANGRNGLLTCCIRPSSIFGPGDRLLVPSLVAAARAGKSKFIIGDGNNLYDFTYVENVA 232

Query: 125 LALILASMGLLDDIPGQKGRPIASGQPYFVSDGFPINTFEFIGPLLKTLDYDLPKSWLAV 184
            A + A   L     G      A+GQ YF+++  PI  +EF+  LL  L Y+ P   + +
Sbjct: 233 HAHVCAERALAS---GGDVSTKAAGQAYFITNMEPIKFWEFMSQLLDGLGYERPS--IKI 287

Query: 185 PHALFLGKVFSFFYSVLYPWLNRWWLPQPLILPAEVYKVGVTHYFSLLKAKDELCYVPIV 244
           P   F+    +    + Y  L  + +  P + P+ V  +  +  F   KAKD L Y P+V
Sbjct: 288 P--AFIMMPIAHLVELTYKVLGPYGMTVPQLTPSRVRLLSCSRTFDSTKAKDRLGYAPVV 345

Query: 245 SPREGMAATI---SYWQDRKRKSLDGPT 269
             +EG+  TI   S+     +   +GP+
Sbjct: 346 PLQEGIRRTIDSFSHLTAGSQSKREGPS 373

Arabidopsis thaliana (taxid: 3702)

EC: 1

EC: .

EC: 1

EC: .

EC: 1

EC: .

EC: 1

EC: 7

EC: 0

>sp|O53454|3BHS_MYCTU 3 beta-hydroxysteroid dehydrogenase/Delta 5-->4-isomerase OS=Mycobacterium tuberculosis GN=Rv1106c PE=1 SV=1

 Score = 93.6 bits (231), Expect = 2e-18,   Method: Compositional matrix adjust.
 Identities = 58/196 (29%), Positives = 96/196 (48%), Gaps = 20/196 (10%)

Query: 65  LRKNNRKCLYTCAVRPAAIYGPGEERHLPRIVSLAKLGLVPFKIGEPSVKTDWIYVDNLV 124
           L +N    + TCA+RP+ I+G G++    ++      G V   +G  S + D  YV NL+
Sbjct: 170 LAQNGVDGMLTCAIRPSGIWGNGDQTMFRKLFESVLKGHVKVLVGRKSARLDNSYVHNLI 229

Query: 125 LALILASMGLLDDIPGQKGRPIASGQPYFVSDGFPINTFEFIGPLLKTLDYDLPKSWLAV 184
              ILA+  L+ D         A GQ YF++D  PIN FEF  P+L+      PK  ++ 
Sbjct: 230 HGFILAAAHLVPD-------GTAPGQAYFINDAEPINMFEFARPVLEACGQRWPKMRISG 282

Query: 185 PHALFLGKVFSFFYSVLYPWLN---RWWLPQPLILPAEVYKVGVTHYFSLLKAKDELCYV 241
           P   +          V+  W     R+  P PL+ P  V ++ + +YFS+ KA+ +L Y 
Sbjct: 283 PAVRW----------VMTGWQRLHFRFGFPAPLLEPLAVERLYLDNYFSIAKARRDLGYE 332

Query: 242 PIVSPREGMAATISYW 257
           P+ + ++ +   + Y+
Sbjct: 333 PLFTTQQALTECLPYY 348

3-beta-HSD is a bifunctional enzyme, that catalyzes the oxidation and isomerization of cholesterol, pregnenolone, and dehydroepiandrosterone (DHEA) into cholest-4-en-3-one, progesterone, and androsterone, respectively.

Mycobacterium tuberculosis (taxid: 1773)

EC: 5

EC: .

EC: 3

EC: .

EC: 3

EC: .

EC: 1

Close Homologs in the Non-Redundant Database Detected by BLAST

Original result of BLAST against Nonredundant Database

GI	Length	Definition	Q cover	H cover	Identity	E-value
Query	366
255539320	478	hydroxysteroid dehydrogenase, putative [	0.825	0.631	0.741	1e-135
418729183	478	3-beta-hydroxy-delta5-steroid dehydrogen	0.819	0.627	0.743	1e-133
225457644	478	PREDICTED: short-chain dehydrogenase/red	0.825	0.631	0.701	1e-128
15226138	480	Rossmann-fold NAD(P)-binding domain-cont	0.819	0.625	0.703	1e-124
297745599	479	unnamed protein product [Vitis vinifera]	0.803	0.613	0.697	1e-124
449455641	478	PREDICTED: short-chain dehydrogenase/red	0.825	0.631	0.678	1e-123
356564410	491	PREDICTED: short-chain dehydrogenase/red	0.877	0.653	0.639	1e-121
297826819	480	3-beta hydroxysteroid dehydrogenase/isom	0.816	0.622	0.695	1e-121
388497514	479	unknown [Lotus japonicus]	0.825	0.630	0.669	1e-120
356553309	478	PREDICTED: short-chain dehydrogenase/red	0.871	0.667	0.636	1e-120

>gi|255539320|ref|XP_002510725.1| hydroxysteroid dehydrogenase, putative [Ricinus communis] gi|223551426|gb|EEF52912.1| hydroxysteroid dehydrogenase, putative [Ricinus communis]

 Score =  486 bits (1250), Expect = e-135,   Method: Compositional matrix adjust.
 Identities = 224/302 (74%), Positives = 263/302 (87%)

Query: 65  LRKNNRKCLYTCAVRPAAIYGPGEERHLPRIVSLAKLGLVPFKIGEPSVKTDWIYVDNLV 124
           L+KNN K LYTCA+RPAAIYGPGEERH+PRIVS AKLGL+PF+IG+ +VKTDW+YVDNLV
Sbjct: 177 LKKNNGKRLYTCAIRPAAIYGPGEERHMPRIVSYAKLGLMPFRIGDANVKTDWVYVDNLV 236

Query: 125 LALILASMGLLDDIPGQKGRPIASGQPYFVSDGFPINTFEFIGPLLKTLDYDLPKSWLAV 184
           LALILASMGLLDDIP   G P+A+GQPYF+SDG PIN+FEF+ PLLK+L+YD+PK+ L+V
Sbjct: 237 LALILASMGLLDDIPNSGGHPVAAGQPYFISDGSPINSFEFLQPLLKSLNYDMPKASLSV 296

Query: 185 PHALFLGKVFSFFYSVLYPWLNRWWLPQPLILPAEVYKVGVTHYFSLLKAKDELCYVPIV 244
           PHAL LGK+F   Y++LYPWLNRWWLPQP ILPAEVYKVGVTHYFS LKAK+EL YVP+V
Sbjct: 297 PHALILGKIFGAIYTLLYPWLNRWWLPQPFILPAEVYKVGVTHYFSFLKAKEELGYVPMV 356

Query: 245 SPREGMAATISYWQDRKRKSLDGPTIYAWLFCLIGLPALFATAYLPDIGPVPILRTIGLF 304
           +PREGMAATI+YWQ++KRKSLDGPTIY WLF +IG+  LF  AYLPDIGPVP+ R I LF
Sbjct: 357 TPREGMAATIAYWQEKKRKSLDGPTIYIWLFAVIGMSTLFCAAYLPDIGPVPLFRAISLF 416

Query: 305 IFKSMWMMRLAFAIAVSAHVSEGVFAWCLAKKVDPANAKGWFWQTLALGVFSLRLLLKRA 364
             +SM M R  F +A +AH+ E ++AW LAK+VDPANA+GWFWQTLALG+FSLR LLKRA
Sbjct: 417 FLRSMRMTRTVFLLASAAHIGESIYAWHLAKRVDPANARGWFWQTLALGIFSLRFLLKRA 476

Query: 365 RK 366
           RK
Sbjct: 477 RK 478

Source: Ricinus communis

Species: Ricinus communis

Genus: Ricinus

Family: Euphorbiaceae

Order: Malpighiales

Phylum: Streptophyta

Superkingdom: Eukaryota

>gi|418729183|gb|AFX66971.1| 3-beta-hydroxy-delta5-steroid dehydrogenase [Solanum tuberosum]

 Score =  481 bits (1237), Expect = e-133,   Method: Compositional matrix adjust.
 Identities = 223/300 (74%), Positives = 264/300 (88%)

Query: 67  KNNRKCLYTCAVRPAAIYGPGEERHLPRIVSLAKLGLVPFKIGEPSVKTDWIYVDNLVLA 126
           K N KCLYTCA+RPAAIYGPGEERHLPRI++L KLGL PFKIG P+VK+DW+YVDNLVLA
Sbjct: 179 KKNGKCLYTCAIRPAAIYGPGEERHLPRIITLTKLGLFPFKIGSPNVKSDWVYVDNLVLA 238

Query: 127 LILASMGLLDDIPGQKGRPIASGQPYFVSDGFPINTFEFIGPLLKTLDYDLPKSWLAVPH 186
           L+LASMGLLDDIPG++G PIA+GQPYF+SDG PIN+FEF+ PLLK+LDYDLPK+ LAV H
Sbjct: 239 LLLASMGLLDDIPGREGLPIAAGQPYFISDGSPINSFEFLLPLLKSLDYDLPKTSLAVSH 298

Query: 187 ALFLGKVFSFFYSVLYPWLNRWWLPQPLILPAEVYKVGVTHYFSLLKAKDELCYVPIVSP 246
           AL LGK+F  FYS LYPWLN  WLPQPLILPAEVYKVGVTHYFS LKAK+EL YVP+VS 
Sbjct: 299 ALLLGKIFWAFYSFLYPWLNSRWLPQPLILPAEVYKVGVTHYFSFLKAKEELGYVPMVSS 358

Query: 247 REGMAATISYWQDRKRKSLDGPTIYAWLFCLIGLPALFATAYLPDIGPVPILRTIGLFIF 306
           +EGMAATI+YWQ+RKR+SLDGPTI+AWLFC+IG+ ALFA AYLPD GP+P +R + LF F
Sbjct: 359 KEGMAATIAYWQERKRRSLDGPTIWAWLFCVIGMSALFAAAYLPDYGPIPFIRAVHLFFF 418

Query: 307 KSMWMMRLAFAIAVSAHVSEGVFAWCLAKKVDPANAKGWFWQTLALGVFSLRLLLKRARK 366
           +SM  +++ F +A +AHV E ++AW +AK +DPANA+GWFWQT ALG+FSLRLLLKRA+K
Sbjct: 419 RSMLALKVIFVLAAAAHVGEAIYAWNVAKTIDPANARGWFWQTFALGIFSLRLLLKRAKK 478

Source: Solanum tuberosum

Species: Solanum tuberosum

Genus: Solanum

Family: Solanaceae

Order: Solanales

Phylum: Streptophyta

Superkingdom: Eukaryota

>gi|225457644|ref|XP_002275214.1| PREDICTED: short-chain dehydrogenase/reductase family 42E member 1 [Vitis vinifera]

 Score =  462 bits (1190), Expect = e-128,   Method: Compositional matrix adjust.
 Identities = 212/302 (70%), Positives = 258/302 (85%)

Query: 65  LRKNNRKCLYTCAVRPAAIYGPGEERHLPRIVSLAKLGLVPFKIGEPSVKTDWIYVDNLV 124
            +  + KCLYTCAVRPAAIYGPGE+RH PRI+SLAKLG++PF IGE +VK DWIYVDNLV
Sbjct: 177 FKNKSGKCLYTCAVRPAAIYGPGEDRHFPRIISLAKLGVLPFTIGEANVKGDWIYVDNLV 236

Query: 125 LALILASMGLLDDIPGQKGRPIASGQPYFVSDGFPINTFEFIGPLLKTLDYDLPKSWLAV 184
            A ILASMGLLDDIPG++ RPIA+GQ YF++DG P+N +EF+ PLL++L+YDLPK+ L V
Sbjct: 237 HAQILASMGLLDDIPGREKRPIAAGQSYFINDGSPVNIYEFLRPLLRSLEYDLPKASLPV 296

Query: 185 PHALFLGKVFSFFYSVLYPWLNRWWLPQPLILPAEVYKVGVTHYFSLLKAKDELCYVPIV 244
           P+ALF+ ++    Y++LYPWLNRWWLPQPL+LPAEVYKVGVTHYFS LKAK+EL YVP+V
Sbjct: 297 PYALFMSRINCMIYTLLYPWLNRWWLPQPLMLPAEVYKVGVTHYFSYLKAKEELGYVPLV 356

Query: 245 SPREGMAATISYWQDRKRKSLDGPTIYAWLFCLIGLPALFATAYLPDIGPVPILRTIGLF 304
           SPREGMAATISYWQ+RKR+SL+GPT+  WLFC+IG+  LF  AYLPDIGPVPI R I LF
Sbjct: 357 SPREGMAATISYWQERKRRSLEGPTLQTWLFCIIGMFVLFCAAYLPDIGPVPIFRAISLF 416

Query: 305 IFKSMWMMRLAFAIAVSAHVSEGVFAWCLAKKVDPANAKGWFWQTLALGVFSLRLLLKRA 364
             +SM ++R+ F +A +AH+ E V+AW LAK+VDPANA+GWFWQT ALG+FSLR LLKRA
Sbjct: 417 FLRSMAIIRVVFLLATAAHIGEAVYAWHLAKRVDPANARGWFWQTFALGIFSLRFLLKRA 476

Query: 365 RK 366
           +K
Sbjct: 477 KK 478

Source: Vitis vinifera

Species: Vitis vinifera

Genus: Vitis

Family: Vitaceae

Order: Vitales

Phylum: Streptophyta

Superkingdom: Eukaryota

>gi|15226138|ref|NP_180921.1| Rossmann-fold NAD(P)-binding domain-containing protein [Arabidopsis thaliana] gi|16226673|gb|AAL16229.1|AF428460_1 At2g33630/F4P9.40 [Arabidopsis thaliana] gi|2459443|gb|AAB80678.1| putative steroid dehydrogenase [Arabidopsis thaliana] gi|20260208|gb|AAM13002.1| putative steroid dehydrogenase [Arabidopsis thaliana] gi|330253770|gb|AEC08864.1| Rossmann-fold NAD(P)-binding domain-containing protein [Arabidopsis thaliana]

 Score =  452 bits (1162), Expect = e-124,   Method: Compositional matrix adjust.
 Identities = 211/300 (70%), Positives = 257/300 (85%)

Query: 67  KNNRKCLYTCAVRPAAIYGPGEERHLPRIVSLAKLGLVPFKIGEPSVKTDWIYVDNLVLA 126
           KN  K +YTCA+RPAAIYGPGE+RHLPRIV+L KLGL  FKIGEPSVK+DWIYV+NLVLA
Sbjct: 178 KNGGKRMYTCAIRPAAIYGPGEDRHLPRIVTLTKLGLALFKIGEPSVKSDWIYVENLVLA 237

Query: 127 LILASMGLLDDIPGQKGRPIASGQPYFVSDGFPINTFEFIGPLLKTLDYDLPKSWLAVPH 186
           +ILASMGLLDDIPG++G+P+A+GQPYFVSDG+P+NTFEF+ PLLK+LDYDLPK  ++VP 
Sbjct: 238 IILASMGLLDDIPGREGQPVAAGQPYFVSDGYPVNTFEFLRPLLKSLDYDLPKCTISVPF 297

Query: 187 ALFLGKVFSFFYSVLYPWLNRWWLPQPLILPAEVYKVGVTHYFSLLKAKDELCYVPIVSP 246
           AL LGK+F  FY+VLYPWL++ WLPQPL+LPAEVYKVGVTHYFS LKAK+EL YVP  S 
Sbjct: 298 ALSLGKIFQGFYTVLYPWLSKSWLPQPLVLPAEVYKVGVTHYFSYLKAKEELGYVPFKSS 357

Query: 247 REGMAATISYWQDRKRKSLDGPTIYAWLFCLIGLPALFATAYLPDIGPVPILRTIGLFIF 306
           +EGMAATISYWQ+RKR+SLDGPT++ W+   IG+ ALFA  +LPDIGPVP LR I LF F
Sbjct: 358 KEGMAATISYWQERKRRSLDGPTMFTWIAVTIGMSALFAAGWLPDIGPVPFLRAIHLFFF 417

Query: 307 KSMWMMRLAFAIAVSAHVSEGVFAWCLAKKVDPANAKGWFWQTLALGVFSLRLLLKRARK 366
           +++ +++  F +AV  HV+EG++AW LAK+VDP NA GWF QT ALG FS+R LLKRA++
Sbjct: 418 RTITIVKAVFIVAVVLHVAEGIYAWFLAKRVDPGNAMGWFLQTSALGFFSMRFLLKRAKE 477

Source: Arabidopsis thaliana

Species: Arabidopsis thaliana

Genus: Arabidopsis

Family: Brassicaceae

Order: Brassicales

Phylum: Streptophyta

Superkingdom: Eukaryota

>gi|297745599|emb|CBI40764.3| unnamed protein product [Vitis vinifera]

 Score =  450 bits (1157), Expect = e-124,   Method: Compositional matrix adjust.
 Identities = 205/294 (69%), Positives = 251/294 (85%)

Query: 65  LRKNNRKCLYTCAVRPAAIYGPGEERHLPRIVSLAKLGLVPFKIGEPSVKTDWIYVDNLV 124
            +  + KCLYTCAVRPAAIYGPGE+RH PRI+SLAKLG++PF IGE +VK DWIYVDNLV
Sbjct: 177 FKNKSGKCLYTCAVRPAAIYGPGEDRHFPRIISLAKLGVLPFTIGEANVKGDWIYVDNLV 236

Query: 125 LALILASMGLLDDIPGQKGRPIASGQPYFVSDGFPINTFEFIGPLLKTLDYDLPKSWLAV 184
            A ILASMGLLDDIPG++ RPIA+GQ YF++DG P+N +EF+ PLL++L+YDLPK+ L V
Sbjct: 237 HAQILASMGLLDDIPGREKRPIAAGQSYFINDGSPVNIYEFLRPLLRSLEYDLPKASLPV 296

Query: 185 PHALFLGKVFSFFYSVLYPWLNRWWLPQPLILPAEVYKVGVTHYFSLLKAKDELCYVPIV 244
           P+ALF+ ++    Y++LYPWLNRWWLPQPL+LPAEVYKVGVTHYFS LKAK+EL YVP+V
Sbjct: 297 PYALFMSRINCMIYTLLYPWLNRWWLPQPLMLPAEVYKVGVTHYFSYLKAKEELGYVPLV 356

Query: 245 SPREGMAATISYWQDRKRKSLDGPTIYAWLFCLIGLPALFATAYLPDIGPVPILRTIGLF 304
           SPREGMAATISYWQ+RKR+SL+GPT+  WLFC+IG+  LF  AYLPDIGPVPI R I LF
Sbjct: 357 SPREGMAATISYWQERKRRSLEGPTLQTWLFCIIGMFVLFCAAYLPDIGPVPIFRAISLF 416

Query: 305 IFKSMWMMRLAFAIAVSAHVSEGVFAWCLAKKVDPANAKGWFWQTLALGVFSLR 358
             +SM ++R+ F +A +AH+ E V+AW LAK+VDPANA+GWFWQT ALG+FSL+
Sbjct: 417 FLRSMAIIRVVFLLATAAHIGEAVYAWHLAKRVDPANARGWFWQTFALGIFSLQ 470

Source: Vitis vinifera

Species: Vitis vinifera

Genus: Vitis

Family: Vitaceae

Order: Vitales

Phylum: Streptophyta

Superkingdom: Eukaryota

>gi|449455641|ref|XP_004145560.1| PREDICTED: short-chain dehydrogenase/reductase family 42E member 1-like [Cucumis sativus] gi|449522962|ref|XP_004168494.1| PREDICTED: short-chain dehydrogenase/reductase family 42E member 1-like [Cucumis sativus]

 Score =  449 bits (1155), Expect = e-123,   Method: Compositional matrix adjust.
 Identities = 205/302 (67%), Positives = 252/302 (83%)

Query: 65  LRKNNRKCLYTCAVRPAAIYGPGEERHLPRIVSLAKLGLVPFKIGEPSVKTDWIYVDNLV 124
           L+  N KCL+TCA+R  AIYGPGEERH  R+VSLAKLGL+PF++G+ S KTDWIYVDNLV
Sbjct: 177 LKNRNGKCLHTCAIRSCAIYGPGEERHFTRLVSLAKLGLLPFRVGKQSAKTDWIYVDNLV 236

Query: 125 LALILASMGLLDDIPGQKGRPIASGQPYFVSDGFPINTFEFIGPLLKTLDYDLPKSWLAV 184
           LALILASMGLLDDIPG+   P+A+GQPY+VSDG P+N+FEF+ PLL +L YDLP  +L V
Sbjct: 237 LALILASMGLLDDIPGKGKDPVAAGQPYYVSDGHPVNSFEFVKPLLNSLGYDLPNYYLPV 296

Query: 185 PHALFLGKVFSFFYSVLYPWLNRWWLPQPLILPAEVYKVGVTHYFSLLKAKDELCYVPIV 244
           P AL LGK F+  Y++LYPWL+RWWLP PL+LPAE+YKVGV++YFS LKAK+EL Y PIV
Sbjct: 297 PKALPLGKFFALLYTILYPWLDRWWLPHPLMLPAEIYKVGVSNYFSYLKAKEELGYAPIV 356

Query: 245 SPREGMAATISYWQDRKRKSLDGPTIYAWLFCLIGLPALFATAYLPDIGPVPILRTIGLF 304
           +P+EGMAATISYWQ+R+RKSLDGPTIY WLFCL+G+  LF  A+LPD+GPVP  + I LF
Sbjct: 357 TPKEGMAATISYWQERERKSLDGPTIYVWLFCLVGMSILFCAAFLPDVGPVPFFKAISLF 416

Query: 305 IFKSMWMMRLAFAIAVSAHVSEGVFAWCLAKKVDPANAKGWFWQTLALGVFSLRLLLKRA 364
            F+S+ ++R+ F +A+  HV E ++AW LA+KVDPAN++GWFWQT ALG FSLR LLKRA
Sbjct: 417 FFRSIKVLRMVFLVALLLHVGEAIYAWFLARKVDPANSRGWFWQTFALGFFSLRFLLKRA 476

Query: 365 RK 366
           R 
Sbjct: 477 RN 478

Source: Cucumis sativus

Species: Cucumis sativus

Genus: Cucumis

Family: Cucurbitaceae

Order: Cucurbitales

Phylum: Streptophyta

Superkingdom: Eukaryota

>gi|356564410|ref|XP_003550447.1| PREDICTED: short-chain dehydrogenase/reductase family 42E member 1-like [Glycine max]

 Score =  442 bits (1136), Expect = e-121,   Method: Compositional matrix adjust.
 Identities = 206/322 (63%), Positives = 263/322 (81%), Gaps = 1/322 (0%)

Query: 45  RTNSPWSHLLINHGVHCIQGLRKNNRKCLYTCAVRPAAIYGPGEERHLPRIVSLAKLGLV 104
           R+ S    L++ +    ++     N + LYTCAVRPAAIYGPGE+RHLPRIV++A+LGL+
Sbjct: 171 RSKSIAEQLVLKNNARTLKSDSSGNHR-LYTCAVRPAAIYGPGEDRHLPRIVTMARLGLL 229

Query: 105 PFKIGEPSVKTDWIYVDNLVLALILASMGLLDDIPGQKGRPIASGQPYFVSDGFPINTFE 164
            F+IG+ +VK+DWI+VDNLVLALILASMGLLDD   +  RP+A+GQ YF+SDG P+N+FE
Sbjct: 230 LFRIGDQTVKSDWIFVDNLVLALILASMGLLDDNLSKGKRPVAAGQAYFISDGSPVNSFE 289

Query: 165 FIGPLLKTLDYDLPKSWLAVPHALFLGKVFSFFYSVLYPWLNRWWLPQPLILPAEVYKVG 224
           F+ PLL++L Y+LPK+ L V  AL LG++    Y++LYPWLNRWWLPQP ILP+EV+KVG
Sbjct: 290 FLQPLLRSLGYELPKTSLPVERALVLGRICWAVYTILYPWLNRWWLPQPFILPSEVHKVG 349

Query: 225 VTHYFSLLKAKDELCYVPIVSPREGMAATISYWQDRKRKSLDGPTIYAWLFCLIGLPALF 284
           VTHYFS LKAK+E+ Y P+V+ REGMA TISYWQ+RKR +LDGPTIYAWLFC+IG+ +LF
Sbjct: 350 VTHYFSYLKAKEEIGYAPMVTSREGMALTISYWQERKRTTLDGPTIYAWLFCVIGMISLF 409

Query: 285 ATAYLPDIGPVPILRTIGLFIFKSMWMMRLAFAIAVSAHVSEGVFAWCLAKKVDPANAKG 344
             A+LPDIG + +LRT  LF+F+SMW+ RL F +A +AH++E ++AW LAK+VDPANA+G
Sbjct: 410 CGAFLPDIGIMSLLRTTCLFVFRSMWVTRLVFLLATAAHIAEAIYAWYLAKRVDPANARG 469

Query: 345 WFWQTLALGVFSLRLLLKRARK 366
           WFWQT ALG FSLRLLLKRARK
Sbjct: 470 WFWQTFALGFFSLRLLLKRARK 491

Source: Glycine max

Species: Glycine max

Genus: Glycine

Family: Fabaceae

Order: Fabales

Phylum: Streptophyta

Superkingdom: Eukaryota

>gi|297826819|ref|XP_002881292.1| 3-beta hydroxysteroid dehydrogenase/isomerase family protein [Arabidopsis lyrata subsp. lyrata] gi|297327131|gb|EFH57551.1| 3-beta hydroxysteroid dehydrogenase/isomerase family protein [Arabidopsis lyrata subsp. lyrata]

 Score =  441 bits (1134), Expect = e-121,   Method: Compositional matrix adjust.
 Identities = 208/299 (69%), Positives = 252/299 (84%)

Query: 67  KNNRKCLYTCAVRPAAIYGPGEERHLPRIVSLAKLGLVPFKIGEPSVKTDWIYVDNLVLA 126
           KN  K +YTCA+RPAAIYGPGE+RHLPRIV+LAKLGL  FKIGEPSVKTDWIYV+NLVLA
Sbjct: 178 KNGGKRMYTCAIRPAAIYGPGEDRHLPRIVTLAKLGLALFKIGEPSVKTDWIYVENLVLA 237

Query: 127 LILASMGLLDDIPGQKGRPIASGQPYFVSDGFPINTFEFIGPLLKTLDYDLPKSWLAVPH 186
           +ILASMGLLDDIPG+ G P+A+GQPYFVSDG P+NTFEF+ PLLK+LDYDLPK  ++VP 
Sbjct: 238 IILASMGLLDDIPGRDGHPVAAGQPYFVSDGSPVNTFEFLRPLLKSLDYDLPKFTISVPS 297

Query: 187 ALFLGKVFSFFYSVLYPWLNRWWLPQPLILPAEVYKVGVTHYFSLLKAKDELCYVPIVSP 246
           AL LGK+F   Y++LYPWL++ WLPQPL+LPAEVYKVGVTHYFS LKAK+EL YVP  S 
Sbjct: 298 ALSLGKIFQGVYTLLYPWLSKSWLPQPLVLPAEVYKVGVTHYFSYLKAKEELGYVPFKSS 357

Query: 247 REGMAATISYWQDRKRKSLDGPTIYAWLFCLIGLPALFATAYLPDIGPVPILRTIGLFIF 306
           +EGMAATISYWQ+RKR+SLDGPTI+ W+  ++G+ ALFA  +LPDIGPVP LR + LF F
Sbjct: 358 KEGMAATISYWQERKRRSLDGPTIFTWIAVILGMSALFAAGWLPDIGPVPFLRALHLFFF 417

Query: 307 KSMWMMRLAFAIAVSAHVSEGVFAWCLAKKVDPANAKGWFWQTLALGVFSLRLLLKRAR 365
           +++ +++  F ++V  HV EG++A  LAK+VDP NA GWF QT ALG FS+R LLKRA+
Sbjct: 418 RTITVVKAVFIVSVILHVGEGIYALLLAKRVDPGNAMGWFLQTCALGFFSMRFLLKRAK 476

Source: Arabidopsis lyrata subsp. lyrata

Species: Arabidopsis lyrata

Genus: Arabidopsis

Family: Brassicaceae

Order: Brassicales

Phylum: Streptophyta

Superkingdom: Eukaryota

>gi|388497514|gb|AFK36823.1| unknown [Lotus japonicus]

 Score =  438 bits (1126), Expect = e-120,   Method: Compositional matrix adjust.
 Identities = 203/303 (66%), Positives = 252/303 (83%), Gaps = 1/303 (0%)

Query: 65  LRKNNRKCLYTCAVRPAAIYGPGEERHLPRIVSLAKLGLVPFKIGEPSVKTDWIYVDNLV 124
            + +   CLYTCAVRPAAIYGPGE+RHLPRI++ AKLGL+ F IG+ +VK+DW++V+NLV
Sbjct: 177 FKNDAGNCLYTCAVRPAAIYGPGEDRHLPRIITTAKLGLLLFTIGDQTVKSDWVFVENLV 236

Query: 125 LALILASMGLLDDIPGQ-KGRPIASGQPYFVSDGFPINTFEFIGPLLKTLDYDLPKSWLA 183
           LALILASMGLLDD  G+ K RPIA+GQ YF+SDG P+NTFEF+ PLL++L+Y+LPK+ LA
Sbjct: 237 LALILASMGLLDDSAGKGKQRPIAAGQAYFISDGSPVNTFEFLQPLLRSLEYELPKTSLA 296

Query: 184 VPHALFLGKVFSFFYSVLYPWLNRWWLPQPLILPAEVYKVGVTHYFSLLKAKDELCYVPI 243
           V HAL LG++    Y++LYPWL+RWWLPQP ILP+ V+KVGVTHYFS LKAK+E+ YVP+
Sbjct: 297 VDHALVLGRICQGVYTILYPWLDRWWLPQPFILPSAVHKVGVTHYFSYLKAKEEIGYVPM 356

Query: 244 VSPREGMAATISYWQDRKRKSLDGPTIYAWLFCLIGLPALFATAYLPDIGPVPILRTIGL 303
            S REGMA+TISYWQ RK  +LDGPTIY WLFC+IG+ +LF  A+LPD+G V +LR   L
Sbjct: 357 ASSREGMASTISYWQQRKMITLDGPTIYTWLFCVIGMISLFCAAFLPDVGIVFLLRATSL 416

Query: 304 FIFKSMWMMRLAFAIAVSAHVSEGVFAWCLAKKVDPANAKGWFWQTLALGVFSLRLLLKR 363
           F+F+SMWM+RL F +A +AHV E ++AW LAK+VD ANA+GWFWQT ALG FSLR LLKR
Sbjct: 417 FVFRSMWMIRLVFILATAAHVFEAIYAWYLAKRVDHANARGWFWQTFALGYFSLRFLLKR 476

Query: 364 ARK 366
           ARK
Sbjct: 477 ARK 479

Source: Lotus japonicus

Species: Lotus japonicus

Genus: Lotus

Family: Fabaceae

Order: Fabales

Phylum: Streptophyta

Superkingdom: Eukaryota

>gi|356553309|ref|XP_003544999.1| PREDICTED: short-chain dehydrogenase/reductase family 42E member 1-like [Glycine max]

 Score =  438 bits (1126), Expect = e-120,   Method: Compositional matrix adjust.
 Identities = 205/322 (63%), Positives = 264/322 (81%), Gaps = 3/322 (0%)

Query: 45  RTNSPWSHLLINHGVHCIQGLRKNNRKCLYTCAVRPAAIYGPGEERHLPRIVSLAKLGLV 104
           R+ S    L++ +     + L+ ++   LYTCAVRPAAIYGPGE+RHLPRIV+LAKLGL+
Sbjct: 160 RSKSIAEQLVLKNNA---RTLKNDSGNRLYTCAVRPAAIYGPGEDRHLPRIVTLAKLGLL 216

Query: 105 PFKIGEPSVKTDWIYVDNLVLALILASMGLLDDIPGQKGRPIASGQPYFVSDGFPINTFE 164
            F+IG+ +VK+DW++VDNLVLALILASMGLLDD   +  RP+A+GQ YF+SDG P+N+FE
Sbjct: 217 LFRIGDQTVKSDWLFVDNLVLALILASMGLLDDNLSKGKRPVAAGQAYFISDGSPVNSFE 276

Query: 165 FIGPLLKTLDYDLPKSWLAVPHALFLGKVFSFFYSVLYPWLNRWWLPQPLILPAEVYKVG 224
           F+ PLL++LDY+LPK+ L V  AL L ++    Y++LYPWLNRWWLPQP ILP+EV+KVG
Sbjct: 277 FLHPLLRSLDYELPKTSLPVDRALVLSRICWAVYTILYPWLNRWWLPQPFILPSEVHKVG 336

Query: 225 VTHYFSLLKAKDELCYVPIVSPREGMAATISYWQDRKRKSLDGPTIYAWLFCLIGLPALF 284
           VTHYFS LKAK+E+ Y P+V+ REGMA TISYWQ+RKR +LDGPTIYAWLFC+IG+ +LF
Sbjct: 337 VTHYFSYLKAKEEIGYFPMVTSREGMALTISYWQERKRTTLDGPTIYAWLFCVIGMISLF 396

Query: 285 ATAYLPDIGPVPILRTIGLFIFKSMWMMRLAFAIAVSAHVSEGVFAWCLAKKVDPANAKG 344
             A+LPDIG + +LR   LF+F+SMW+ RL F +A +AH++E ++AW LAK++DPANA+G
Sbjct: 397 CGAFLPDIGIMSLLRATCLFVFRSMWVTRLVFLLATAAHIAEAIYAWYLAKRMDPANARG 456

Query: 345 WFWQTLALGVFSLRLLLKRARK 366
           WFWQT ALG+FSLRLLLKRARK
Sbjct: 457 WFWQTFALGMFSLRLLLKRARK 478

Source: Glycine max

Species: Glycine max

Genus: Glycine

Family: Fabaceae

Order: Fabales

Phylum: Streptophyta

Superkingdom: Eukaryota

---

Prediction of Gene Ontology (GO) Terms

Close Homologs with Gene Ontology terms Detected by BLAST

Original result of BLAST against Gene Ontology (AMIGO)

ID	Length	Definition	Q cover	H cover	Identity	E-value
Query	366
TAIR|locus:2051063	480	AT2G33630 [Arabidopsis thalian	0.819	0.625	0.703	7.8e-144
UNIPROTKB|J9NYA9	393	SDR42E1 "Uncharacterized prote	0.434	0.404	0.523	2.2e-40
UNIPROTKB|I3L900	390	SDR42E1 "Uncharacterized prote	0.434	0.407	0.517	2.8e-40
UNIPROTKB|Q8WUS8	393	SDR42E1 "Short-chain dehydroge	0.568	0.529	0.447	7.4e-40
MGI|MGI:1921282	394	Sdr42e1 "short chain dehydroge	0.439	0.408	0.488	1.2e-37
UNIPROTKB|F1MDX4	398	SDR42E1 "Short-chain dehydroge	0.434	0.399	0.505	2.4e-37
UNIPROTKB|G3X7Y2	393	SDR42E1 "Short-chain dehydroge	0.434	0.404	0.505	2.4e-37
UNIPROTKB|Q32L94	393	SDR42E1 "Short-chain dehydroge	0.434	0.404	0.505	3.1e-37
UNIPROTKB|E1C6D8	391	SDR42E1 "Uncharacterized prote	0.453	0.424	0.462	1.3e-36
ZFIN|ZDB-GENE-051120-63	400	sdr42e1 "short chain dehydroge	0.581	0.532	0.391	2e-33

TAIR|locus:2051063 AT2G33630 [Arabidopsis thaliana (taxid:3702)]

 Score = 1169 (416.6 bits), Expect = 7.8e-144, Sum P(2) = 7.8e-144
 Identities = 211/300 (70%), Positives = 257/300 (85%)

Query:    67 KNNRKCLYTCAVRPAAIYGPGEERHLPRIVSLAKLGLVPFKIGEPSVKTDWIYVDNLVLA 126
             KN  K +YTCA+RPAAIYGPGE+RHLPRIV+L KLGL  FKIGEPSVK+DWIYV+NLVLA
Sbjct:   178 KNGGKRMYTCAIRPAAIYGPGEDRHLPRIVTLTKLGLALFKIGEPSVKSDWIYVENLVLA 237

Query:   127 LILASMGLLDDIPGQKGRPIASGQPYFVSDGFPINTFEFIGPLLKTLDYDLPKSWLAVPH 186
             +ILASMGLLDDIPG++G+P+A+GQPYFVSDG+P+NTFEF+ PLLK+LDYDLPK  ++VP 
Sbjct:   238 IILASMGLLDDIPGREGQPVAAGQPYFVSDGYPVNTFEFLRPLLKSLDYDLPKCTISVPF 297

Query:   187 ALFLGKVFSFFYSVLYPWLNRWWLPQPLILPAEVYKVGVTHYFSLLKAKDELCYVPIVSP 246
             AL LGK+F  FY+VLYPWL++ WLPQPL+LPAEVYKVGVTHYFS LKAK+EL YVP  S 
Sbjct:   298 ALSLGKIFQGFYTVLYPWLSKSWLPQPLVLPAEVYKVGVTHYFSYLKAKEELGYVPFKSS 357

Query:   247 REGMAATISYWQDRKRKSLDGPTIYAWLFCLIGLPALFATAYLPDIGPVPILRTIGLFIF 306
             +EGMAATISYWQ+RKR+SLDGPT++ W+   IG+ ALFA  +LPDIGPVP LR I LF F
Sbjct:   358 KEGMAATISYWQERKRRSLDGPTMFTWIAVTIGMSALFAAGWLPDIGPVPFLRAIHLFFF 417

Query:   307 KSMWMMRLAFAIAVSAHVSEGVFAWCLAKKVDPANAKGWFWQTLALGVFSLRLLLKRARK 366
             +++ +++  F +AV  HV+EG++AW LAK+VDP NA GWF QT ALG FS+R LLKRA++
Sbjct:   418 RTITIVKAVFIVAVVLHVAEGIYAWFLAKRVDPGNAMGWFLQTSALGFFSMRFLLKRAKE 477

GO:0000166 "nucleotide binding" evidence=IEA

GO:0003854 "3-beta-hydroxy-delta5-steroid dehydrogenase activity" evidence=IEA;ISS

GO:0006694 "steroid biosynthetic process" evidence=IEA;ISS

GO:0016616 "oxidoreductase activity, acting on the CH-OH group of donors, NAD or NADP as acceptor" evidence=IEA

GO:0055114 "oxidation-reduction process" evidence=IEA

GO:0005783 "endoplasmic reticulum" evidence=IDA

UNIPROTKB|J9NYA9 SDR42E1 "Uncharacterized protein" [Canis lupus familiaris (taxid:9615)]

 Score = 384 (140.2 bits), Expect = 2.2e-40, Sum P(2) = 2.2e-40
 Identities = 88/168 (52%), Positives = 107/168 (63%)

Query:    73 LYTCAVRPAAIYGPGEERHLPRIVSLAKLGLVPFKIGEPSVKTDWIYVDNLVLALILASM 132
             L TCA+RPA IYGPGE+RHLPRIVS  + GL  F  G+P    ++++VDNLV A ILAS 
Sbjct:   178 LRTCALRPAGIYGPGEQRHLPRIVSYIERGLFKFVYGDPRSLVEFVHVDNLVQAHILASE 237

Query:   133 GLLDDIPGQKGRPIASGQPYFVSDGFPINTFEFIGPLLKTLDYDLPKSWLAVPHALFLGK 192
              L  D    KG  IASGQPYF+SDG P+N FEF  PL++ L Y  P   + VP  L    
Sbjct:   238 ALKAD----KGH-IASGQPYFISDGRPVNNFEFFRPLVEGLGYTFPS--VRVPLTLIY-- 288

Query:   193 VFSFFYSVLYPWLNRWWLPQPLILPAEVYKVGVTHYFSLLKAKDELCY 240
              F+F   +++  L R +  QP +   EVYK GVTHYFSL KAK EL Y
Sbjct:   289 CFAFLTEMVHFILGRLYNFQPFLTRTEVYKTGVTHYFSLDKAKKELGY 336

GO:0006694 "steroid biosynthetic process" evidence=IEA

GO:0003854 "3-beta-hydroxy-delta5-steroid dehydrogenase activity" evidence=IEA

GO:0000166 "nucleotide binding" evidence=IEA

UNIPROTKB|I3L900 SDR42E1 "Uncharacterized protein" [Sus scrofa (taxid:9823)]

 Score = 386 (140.9 bits), Expect = 2.8e-40, Sum P(2) = 2.8e-40
 Identities = 87/168 (51%), Positives = 105/168 (62%)

Query:    73 LYTCAVRPAAIYGPGEERHLPRIVSLAKLGLVPFKIGEPSVKTDWIYVDNLVLALILASM 132
             L TCA+RPA IYGPGE+RHLPRIVS  + GL  F  G+P    ++++VDNLV A ILAS 
Sbjct:   174 LRTCALRPAGIYGPGEQRHLPRIVSYLEKGLFRFVYGDPKSLVEFVHVDNLVQAHILASE 233

Query:   133 GLLDDIPGQKGRPIASGQPYFVSDGFPINTFEFIGPLLKTLDYDLPKSWLAVPHALFLGK 192
              L  D    KG  +ASGQPYF+SDG P+N FEF  PL++ L Y  P   L +P   F   
Sbjct:   234 ALKAD----KGH-VASGQPYFISDGRPVNNFEFFRPLVEGLGYKFPSVRLPLPLIYF--- 285

Query:   193 VFSFFYSVLYPWLNRWWLPQPLILPAEVYKVGVTHYFSLLKAKDELCY 240
              F+F   + Y  L R +  QP +   EVYK  VTHYFSL KAK EL Y
Sbjct:   286 -FAFLTEMAYFLLGRLYNFQPFLTRTEVYKTAVTHYFSLEKAKKELGY 332

GO:0006694 "steroid biosynthetic process" evidence=IEA

GO:0003854 "3-beta-hydroxy-delta5-steroid dehydrogenase activity" evidence=IEA

GO:0000166 "nucleotide binding" evidence=IEA

UNIPROTKB|Q8WUS8 SDR42E1 "Short-chain dehydrogenase/reductase family 42E member 1" [Homo sapiens (taxid:9606)]

 Score = 385 (140.6 bits), Expect = 7.4e-40, Sum P(2) = 7.4e-40
 Identities = 98/219 (44%), Positives = 125/219 (57%)

Query:    73 LYTCAVRPAAIYGPGEERHLPRIVSLAKLGLVPFKIGEPSVKTDWIYVDNLVLALILASM 132
             L TCA+RPA IYGPGE+RHLPRIVS  + GL  F  G+P    ++++VDNLV A ILAS 
Sbjct:   178 LRTCALRPAGIYGPGEQRHLPRIVSYIEKGLFKFVYGDPRSLVEFVHVDNLVQAHILASE 237

Query:   133 GLLDDIPGQKGRPIASGQPYFVSDGFPINTFEFIGPLLKTLDYDLPKSWLAVPHALFLGK 192
              L  D    KG  IASGQPYF+SDG P+N FEF  PL++ L Y  P + L  P  L L  
Sbjct:   238 ALRAD----KGH-IASGQPYFISDGRPVNNFEFFRPLVEGLGYTFPSTRL--P--LTLVY 288

Query:   193 VFSFFYSVLYPWLNRWWLPQPLILPAEVYKVGVTHYFSLLKAKDELCY-VPIVSPREGMA 251
              F+F   +++  L R +  QP +   EVYK GVTHYFSL KAK EL Y       +E + 
Sbjct:   289 CFAFLTEMVHFILGRLYNFQPFLTRTEVYKTGVTHYFSLEKAKKELGYKAQPFDLQEAVE 348

Query:   252 ATISYWQDRKRKSLDGPTIYAWLFCLIGLPALFATAYLP 290
                ++   R   S D    + W   L+ L  +    +LP
Sbjct:   349 WFKAHGHGRSSGSRDSEC-FVWDGLLVFLLIIAVLMWLP 386

GO:0000166 "nucleotide binding" evidence=IEA

GO:0003854 "3-beta-hydroxy-delta5-steroid dehydrogenase activity" evidence=IEA

GO:0006694 "steroid biosynthetic process" evidence=IEA

GO:0016021 "integral to membrane" evidence=IEA

MGI|MGI:1921282 Sdr42e1 "short chain dehydrogenase/reductase family 42E, member 1" [Mus musculus (taxid:10090)]

 Score = 363 (132.8 bits), Expect = 1.2e-37, Sum P(2) = 1.2e-37
 Identities = 83/170 (48%), Positives = 104/170 (61%)

Query:    73 LYTCAVRPAAIYGPGEERHLPRIVSLAKLGLVPFKIGEPSVKTDWIYVDNLVLALILASM 132
             L TCA+RPA IYG GE+RHLPRIVS  + GL  F  G+P    ++++VDNL  A ILAS 
Sbjct:   179 LRTCAIRPAGIYGAGEQRHLPRIVSYIERGLFRFVYGDPQSLVEFVHVDNLAKAHILASE 238

Query:   133 GLLDDIPGQKGRPIASGQPYFVSDGFPINTFEFIGPLLKTLDYDLPKSWLAVPHALFLGK 192
              L  D    KG  +ASGQPYF+SDG P+N FEF  PL++ L Y  P + L  P  L    
Sbjct:   239 ALKAD----KGH-VASGQPYFISDGRPVNNFEFFRPLVEGLGYTFPSTRL--PLTLIY-- 289

Query:   193 VFSFFYSVLYPWLNRWWLPQPLILPAEVYKVGVTHYFSLLKAKDELCYVP 242
               +F   + +  + R +  QP +   EVYK GVTHYFSL KAK EL + P
Sbjct:   290 CLAFLVEMTHFIVGRLYNFQPFLTRTEVYKTGVTHYFSLEKAKKELGFEP 339

GO:0000166 "nucleotide binding" evidence=IEA

GO:0003674 "molecular_function" evidence=ND

GO:0003854 "3-beta-hydroxy-delta5-steroid dehydrogenase activity" evidence=IEA

GO:0005575 "cellular_component" evidence=ND

GO:0006694 "steroid biosynthetic process" evidence=IEA

GO:0008150 "biological_process" evidence=ND

GO:0016020 "membrane" evidence=IEA

GO:0016021 "integral to membrane" evidence=IEA

GO:0016491 "oxidoreductase activity" evidence=IEA

GO:0016616 "oxidoreductase activity, acting on the CH-OH group of donors, NAD or NADP as acceptor" evidence=IEA

GO:0055114 "oxidation-reduction process" evidence=IEA

UNIPROTKB|F1MDX4 SDR42E1 "Short-chain dehydrogenase/reductase family 42E member 1" [Bos taurus (taxid:9913)]

 Score = 372 (136.0 bits), Expect = 2.4e-37, Sum P(2) = 2.4e-37
 Identities = 85/168 (50%), Positives = 105/168 (62%)

Query:    73 LYTCAVRPAAIYGPGEERHLPRIVSLAKLGLVPFKIGEPSVKTDWIYVDNLVLALILASM 132
             L TCA+RPA IYGPGE+RHLPRIVS  + GL  F  G+P    ++++VDNLV A ILAS 
Sbjct:   178 LSTCALRPAGIYGPGEQRHLPRIVSYIEKGLFRFVYGDPKSLVEFVHVDNLVQAHILASE 237

Query:   133 GLLDDIPGQKGRPIASGQPYFVSDGFPINTFEFIGPLLKTLDYDLPKSWLAVPHALFLGK 192
              L       KG  IA+GQPYF+SDG P+N FEF  PL++ L Y  P + L  P  L    
Sbjct:   238 AL----KANKGH-IAAGQPYFISDGRPVNNFEFFRPLVEGLGYKFPSTRL--PLTLIY-- 288

Query:   193 VFSFFYSVLYPWLNRWWLPQPLILPAEVYKVGVTHYFSLLKAKDELCY 240
              F+F   + +  L R +  QP +   EVYK GVTHYFSL KA+ EL Y
Sbjct:   289 CFAFLTEMTHFILGRLYNFQPFLTRTEVYKTGVTHYFSLEKARKELGY 336

GO:0006694 "steroid biosynthetic process" evidence=IEA

GO:0003854 "3-beta-hydroxy-delta5-steroid dehydrogenase activity" evidence=IEA

GO:0000166 "nucleotide binding" evidence=IEA

UNIPROTKB|G3X7Y2 SDR42E1 "Short-chain dehydrogenase/reductase family 42E member 1" [Bos taurus (taxid:9913)]

 Score = 372 (136.0 bits), Expect = 2.4e-37, Sum P(2) = 2.4e-37
 Identities = 85/168 (50%), Positives = 105/168 (62%)

Query:    73 LYTCAVRPAAIYGPGEERHLPRIVSLAKLGLVPFKIGEPSVKTDWIYVDNLVLALILASM 132
             L TCA+RPA IYGPGE+RHLPRIVS  + GL  F  G+P    ++++VDNLV A ILAS 
Sbjct:   178 LSTCALRPAGIYGPGEQRHLPRIVSYIEKGLFRFVYGDPKSLVEFVHVDNLVQAHILASE 237

Query:   133 GLLDDIPGQKGRPIASGQPYFVSDGFPINTFEFIGPLLKTLDYDLPKSWLAVPHALFLGK 192
              L       KG  IA+GQPYF+SDG P+N FEF  PL++ L Y  P + L  P  L    
Sbjct:   238 AL----KANKGH-IAAGQPYFISDGRPVNNFEFFRPLVEGLGYKFPSTRL--PLTLIY-- 288

Query:   193 VFSFFYSVLYPWLNRWWLPQPLILPAEVYKVGVTHYFSLLKAKDELCY 240
              F+F   + +  L R +  QP +   EVYK GVTHYFSL KA+ EL Y
Sbjct:   289 CFAFLTEMTHFILGRLYNFQPFLTRTEVYKTGVTHYFSLEKARKELGY 336

GO:0006694 "steroid biosynthetic process" evidence=IEA

GO:0003854 "3-beta-hydroxy-delta5-steroid dehydrogenase activity" evidence=IEA

GO:0000166 "nucleotide binding" evidence=IEA

UNIPROTKB|Q32L94 SDR42E1 "Short-chain dehydrogenase/reductase family 42E member 1" [Bos taurus (taxid:9913)]

 Score = 372 (136.0 bits), Expect = 3.1e-37, Sum P(2) = 3.1e-37
 Identities = 85/168 (50%), Positives = 105/168 (62%)

Query:    73 LYTCAVRPAAIYGPGEERHLPRIVSLAKLGLVPFKIGEPSVKTDWIYVDNLVLALILASM 132
             L TCA+RPA IYGPGE+RHLPRIVS  + GL  F  G+P    ++++VDNLV A ILAS 
Sbjct:   178 LSTCALRPAGIYGPGEQRHLPRIVSYIEKGLFRFVYGDPKSLVEFVHVDNLVQAHILASE 237

Query:   133 GLLDDIPGQKGRPIASGQPYFVSDGFPINTFEFIGPLLKTLDYDLPKSWLAVPHALFLGK 192
              L       KG  IA+GQPYF+SDG P+N FEF  PL++ L Y  P + L  P  L    
Sbjct:   238 AL----KANKGH-IAAGQPYFISDGRPVNNFEFFRPLVEGLGYKFPSTRL--PLTLIY-- 288

Query:   193 VFSFFYSVLYPWLNRWWLPQPLILPAEVYKVGVTHYFSLLKAKDELCY 240
              F+F   + +  L R +  QP +   EVYK GVTHYFSL KA+ EL Y
Sbjct:   289 CFAFLTEMTHFILGRLYNFQPFLTRTEVYKTGVTHYFSLEKARKELGY 336

GO:0016021 "integral to membrane" evidence=IEA

GO:0006694 "steroid biosynthetic process" evidence=IEA

GO:0003854 "3-beta-hydroxy-delta5-steroid dehydrogenase activity" evidence=IEA

GO:0000166 "nucleotide binding" evidence=IEA

UNIPROTKB|E1C6D8 SDR42E1 "Uncharacterized protein" [Gallus gallus (taxid:9031)]

 Score = 361 (132.1 bits), Expect = 1.3e-36, Sum P(2) = 1.3e-36
 Identities = 81/175 (46%), Positives = 107/175 (61%)

Query:    68 NNRKCLYTCAVRPAAIYGPGEERHLPRIVSLAKLGLVPFKIGEPSVKTDWIYVDNLVLAL 127
             N +  L TCA+RPA IYGPGE+RHLPRIVS  + GL  F  G+P    ++++VDNLV A 
Sbjct:   171 NGKGVLRTCALRPAGIYGPGEQRHLPRIVSYIERGLFKFVYGDPLSLVEFVHVDNLVQAH 230

Query:   128 ILASMGLLDDIPGQKGRPIASGQPYFVSDGFPINTFEFIGPLLKTLDYDLPKSWLAVPHA 187
             ILA     + +   K + IA+GQ YF+SDG P+N FEF  PL++ L Y  P   L +   
Sbjct:   231 ILA----FEALKANK-KHIAAGQAYFISDGRPVNNFEFFRPLVEGLGYKFPTCRLPLSLV 285

Query:   188 LFLGKVFSFFYSVLYPWLNRWWLPQPLILPAEVYKVGVTHYFSLLKAKDELCYVP 242
              F    F+F   V++  +   +  QPL+   EVYK GVTHYFS+ KA+ EL Y P
Sbjct:   286 YF----FAFLTEVVHFLVGHVYNFQPLLTRTEVYKTGVTHYFSMEKARKELGYEP 336

GO:0000166 "nucleotide binding" evidence=IEA

GO:0003854 "3-beta-hydroxy-delta5-steroid dehydrogenase activity" evidence=IEA

GO:0006694 "steroid biosynthetic process" evidence=IEA

ZFIN|ZDB-GENE-051120-63 sdr42e1 "short chain dehydrogenase/reductase family 42E, member 1" [Danio rerio (taxid:7955)]

 Score = 364 (133.2 bits), Expect = 2.0e-33, P = 2.0e-33
 Identities = 90/230 (39%), Positives = 134/230 (58%)

Query:    68 NNRKCLYTCAVRPAAIYGPGEERHLPRIVSLAKLGLVPFKIGEPSVKTDWIYVDNLVLAL 127
             N+   L TCA+RPA IYGPGE+RHLPRIVS  + G+  F  G+P    ++++VDNLV A 
Sbjct:   183 NSTGVLRTCALRPAGIYGPGEQRHLPRIVSYIENGIFRFVYGDPDSLVEFVHVDNLVSAH 242

Query:   128 ILASMGLLDDIPGQKGRPIASGQPYFVSDGFPINTFEFIGPLLKTLDYDLPKSWLAVPHA 187
             +LA+  L +    Q+ R  A+GQ YF+SDG P+N FEF  PL++ L Y  P   L +   
Sbjct:   243 LLAADALTEK---QQCR--AAGQAYFISDGRPVNNFEFFRPLVEGLGYSFPTLRLPISMI 297

Query:   188 LFLGKVFSFFYSVLYPWLNRWWLPQPLILPAEVYKVGVTHYFSLLKAKDELCYVPIVSPR 247
              F    F+F   +++  + R +  QPL+   EVYK GVTHYFS+ KA++EL Y P +   
Sbjct:   298 YF----FAFLTEMVHFVVGRIYNFQPLLTRTEVYKTGVTHYFSMRKAREELGYEPKLYDL 353

Query:   248 EGMAATISYWQDR---KRKSLDG-PTIYAWLFCLIGLPALFATAYLPDIG 293
             E +   + ++Q R   K++S      +   +F ++   A+  +  LP +G
Sbjct:   354 EDV---VQWFQARGHGKKRSRSSIRKLILDVFVVVAFVAVLLSC-LPVVG 399

GO:0016616 "oxidoreductase activity, acting on the CH-OH group of donors, NAD or NADP as acceptor" evidence=IEA

GO:0055114 "oxidation-reduction process" evidence=IEA

GO:0000166 "nucleotide binding" evidence=IEA

GO:0006694 "steroid biosynthetic process" evidence=IEA

GO:0003854 "3-beta-hydroxy-delta5-steroid dehydrogenase activity" evidence=IEA

GO:0016020 "membrane" evidence=IEA

GO:0016491 "oxidoreductase activity" evidence=IEA

GO:0016021 "integral to membrane" evidence=IEA

---

Prediction of Enzyme Commission (EC) Number

EC Number Prediction by Annotation Transfer from SWISS-PROT Entries

Original result of BLAST against SWISS-PROT

No confident hit for EC number transfering in SWISSPROT detected by BLAST

EC Number Prediction by Ezypred Server

Original result from Ezypred Server

Fail to connect to Ezypred Server

EC Number Prediction by EFICAz Software

No EC number assignment, probably not an enzyme!

---

Prediction of Functionally Associated Proteins

Functionally Associated Proteins Detected by STRING

Original result from the STRING server

Your Input: GSVIVG00002931001 SubName- Full=Chromosome chr18 scaffold_137, whole genome shotgun sequence; (478 aa) (Vitis vinifera)

Predicted Functional Partners:

Sorry, there are no predicted associations at the current settings.

---

Conserved Domains and Related Protein Families

Conserved Domains Detected by RPS-BLAST

Original result of RPS-BLAST against CDD database part I

ID	Length	Definition	E-value
Query	366
cd09812	339	cd09812, 3b-HSD_like_1_SDR_e, 3beta-hydroxysteroid	1e-48
cd05241	331	cd05241, 3b-HSD-like_SDR_e, 3beta-hydroxysteroid d	1e-36
pfam01073	280	pfam01073, 3Beta_HSD, 3-beta hydroxysteroid dehydr	1e-32
cd09813	335	cd09813, 3b-HSD-NSDHL-like_SDR_e, human NSDHL (NAD	5e-29
cd09811	354	cd09811, 3b-HSD_HSDB1_like_SDR_e, human 3beta-HSD	2e-13
cd05232	303	cd05232, UDP_G4E_4_SDR_e, UDP-glucose 4 epimerase,	3e-06
pfam01073	280	pfam01073, 3Beta_HSD, 3-beta hydroxysteroid dehydr	4e-06
COG0451	314	COG0451, WcaG, Nucleoside-diphosphate-sugar epimer	6e-06
cd05237	287	cd05237, UDP_invert_4-6DH_SDR_e, UDP-Glcnac (UDP-l	2e-05
cd05228	318	cd05228, AR_FR_like_1_SDR_e, uncharacterized subgr	1e-04
cd08946	200	cd08946, SDR_e, extended (e) SDRs	3e-04
COG0451	314	COG0451, WcaG, Nucleoside-diphosphate-sugar epimer	4e-04
cd05241	331	cd05241, 3b-HSD-like_SDR_e, 3beta-hydroxysteroid d	0.001
pfam01370	233	pfam01370, Epimerase, NAD dependent epimerase/dehy	0.001
smart00822	180	smart00822, PKS_KR, This enzymatic domain is part	0.003
cd05243	203	cd05243, SDR_a5, atypical (a) SDRs, subgroup 5	0.003
TIGR03206	250	TIGR03206, benzo_BadH, 2-hydroxycyclohexanecarboxy	0.004
PRK06171	266	PRK06171, PRK06171, sorbitol-6-phosphate 2-dehydro	0.004
cd05251	242	cd05251, NmrA_like_SDR_a, NmrA (a transcriptional	0.004
COG1086	588	COG1086, COG1086, Predicted nucleoside-diphosphate	0.004

>gnl|CDD|187672 cd09812, 3b-HSD_like_1_SDR_e, 3beta-hydroxysteroid dehydrogenase (3b-HSD)-like, subgroup1, extended (e) SDRs

 Score =  166 bits (422), Expect = 1e-48
 Identities = 86/176 (48%), Positives = 108/176 (61%), Gaps = 9/176 (5%)

Query: 67  KNNRKCLYTCAVRPAAIYGPGEERHLPRIVSLAKLGLVPFKIGEPSVKTDWIYVDNLVLA 126
            NN   L TCA+RPA IYGPGE+RHLPRIVS  + GL  F  G+P    ++++VDNLV A
Sbjct: 161 PNNGGVLRTCALRPAGIYGPGEQRHLPRIVSYIEKGLFMFVYGDPKSLVEFVHVDNLVQA 220

Query: 127 LILASMGLLDDIPGQKGRPIASGQPYFVSDGFPINTFEFIGPLLKTLDYDLPKSWLAVPH 186
            ILA+  L       KG  IASGQ YF+SDG P+N FEF  PL++ L Y  P   L +P 
Sbjct: 221 HILAAEALTTA----KGY-IASGQAYFISDGRPVNNFEFFRPLVEGLGYSFP--SLRLPL 273

Query: 187 ALFLGKVFSFFYSVLYPWLNRWWLPQPLILPAEVYKVGVTHYFSLLKAKDELCYVP 242
           +L     F+F   +++  L      QPL+   EVYK GVTHYFS+ KA+ EL Y P
Sbjct: 274 SLVY--FFAFLTEMVHFALGPICNFQPLLTRTEVYKTGVTHYFSIEKARAELGYEP 327

An uncharacterized subgroup of the 3b-HSD-like extended-SDR family. Proteins in this subgroup have the characteristic active site tetrad and NAD(P)-binding motif of extended-SDRs. 3 beta-HSD catalyzes the oxidative conversion of delta 5-3 beta-hydroxysteroids to the delta 4-3-keto configuration; this activity is essential for the biosynthesis of all classes of hormonal steroids. Extended SDRs are distinct from classical SDRs. In addition to the Rossmann fold (alpha/beta folding pattern with a central beta-sheet) core region typical of all SDRs, extended SDRs have a less conserved C-terminal extension of approximately 100 amino acids. Extended SDRs are a diverse collection of proteins, and include isomerases, epimerases, oxidoreductases, and lyases; they typically have a TGXXGXXG cofactor binding motif. SDRs are a functionally diverse family of oxidoreductases that have a single domain with a structurally conserved Rossmann fold, an NAD(P)(H)-binding region, and a structurally diverse C-terminal region. Sequence identity between different SDR enzymes is typically in the 15-30% range; they catalyze a wide range of activities including the metabolism of steroids, cofactors, carbohydrates, lipids, aromatic compounds, and amino acids, and act in redox sensing. Classical SDRs have an TGXXX[AG]XG cofactor binding motif and a YXXXK active site motif, with the Tyr residue of the active site motif serving as a critical catalytic residue (Tyr-151, human 15-hydroxyprostaglandin dehydrogenase numbering). In addition to the Tyr and Lys, there is often an upstream Ser and/or an Asn, contributing to the active site; while substrate binding is in the C-terminal region, which determines specificity. The standard reaction mechanism is a 4-pro-S hydride transfer and proton relay involving the conserved Tyr and Lys, a water molecule stabilized by Asn, and nicotinamide. Atypical SDRs generally lack the catalytic residues characteristic of the SDRs, and their glycine-rich NAD(P)-binding motif is often different from the forms normally seen in classical or extended SDRs. Complex (multidomain) SDRs such as ketoreductase domains of fatty acid sythase have a GGXGXXG NAD(P)-binding motif and an altered active site motif (YXXXN). Fungal type ketoacyl reductases have a TGXXXGX(1-2)G NAD(P)-binding motif. Length = 339

>gnl|CDD|187552 cd05241, 3b-HSD-like_SDR_e, 3beta-hydroxysteroid dehydrogenases (3b-HSD)-like, extended (e) SDRs

 Score =  135 bits (341), Expect = 1e-36
 Identities = 68/199 (34%), Positives = 96/199 (48%), Gaps = 28/199 (14%)

Query: 65  LRKNNRKCLYTCAVRPAAIYGPGEERHLPRIVSLAKLGLVPFKIGEPSVKTDWIYVDNLV 124
           L  N R  L TCA+RPA I+GPG++  +P +   A+ GLV F  G  +   D+ YV NL 
Sbjct: 153 LEANGRDDLLTCALRPAGIFGPGDQGLVPILFEWAEKGLVKFVFGRGNNLVDFTYVHNLA 212

Query: 125 LALILASMGLLDDIPGQKGRPIASGQPYFVSDGFPINTFEFIGPLLKTLDY-DLPKSWLA 183
            A ILA+  L+            SGQ YF++D  P N FE + P+ K L +   PK  L+
Sbjct: 213 HAHILAAAALVKGKT-------ISGQTYFITDAEPHNMFELLRPVWKALGFGSRPKIRLS 265

Query: 184 VPHAL---FLGKVFSF---FYSVLYPWLNRWWLPQPLILPAEVYKVGVTHYFSLLKAKDE 237
            P A     L ++ SF    Y V  P+  R               +    YFS+ KA+ +
Sbjct: 266 GPLAYCAALLSELVSFMLGPYFVFSPFYVR--------------ALVTPMYFSIAKAQKD 311

Query: 238 LCYVPIVSPREGMAATISY 256
           L Y P  S  EG+  T+++
Sbjct: 312 LGYAPRYSNEEGLIETLNW 330

Extended SDR family domains belonging to this subgroup have the characteristic active site tetrad and a fairly well-conserved NAD(P)-binding motif. 3b-HSD catalyzes the NAD-dependent conversion of various steroids, such as pregnenolone to progesterone, or androstenediol to testosterone. This subgroup includes an unusual bifunctional 3b-HSD/C-4 decarboxylase from Arabidopsis thaliana, and Saccharomyces cerevisiae ERG26, a 3b-HSD/C-4 decarboxylase, involved in the synthesis of ergosterol, the major sterol of yeast. It also includes human 3 beta-HSD/HSD3B1 and C(27) 3beta-HSD/ [3beta-hydroxy-delta(5)-C(27)-steroid oxidoreductase; HSD3B7]. C(27) 3beta-HSD/HSD3B7 is a membrane-bound enzyme of the endoplasmic reticulum, that catalyzes the isomerization and oxidation of 7alpha-hydroxylated sterol intermediates, an early step in bile acid biosynthesis. Mutations in the human NSDHL (NAD(P)H steroid dehydrogenase-like protein) cause CHILD syndrome (congenital hemidysplasia with ichthyosiform nevus and limb defects), an X-linked dominant, male-lethal trait. Mutations in the human gene encoding C(27) 3beta-HSD underlie a rare autosomal recessive form of neonatal cholestasis. Extended SDRs are distinct from classical SDRs. In addition to the Rossmann fold (alpha/beta folding pattern with a central beta-sheet) core region typical of all SDRs, extended SDRs have a less conserved C-terminal extension of approximately 100 amino acids. Extended SDRs are a diverse collection of proteins, and include isomerases, epimerases, oxidoreductases, and lyases; they typically have a TGXXGXXG cofactor binding motif. SDRs are a functionally diverse family of oxidoreductases that have a single domain with a structurally conserved Rossmann fold, an NAD(P)(H)-binding region, and a structurally diverse C-terminal region. Sequence identity between different SDR enzymes is typically in the 15-30% range; they catalyze a wide range of activities including the metabolism of steroids, cofactors, carbohydrates, lipids, aromatic compounds, and amino acids, and act in redox sensing. Classical SDRs have an TGXXX[AG]XG cofactor binding motif and a YXXXK active site motif, with the Tyr residue of the active site motif serving as a critical catalytic residue (Tyr-151, human 15-hydroxyprostaglandin dehydrogenase numbering). In addition to the Tyr and Lys, there is often an upstream Ser and/or an Asn, contributing to the active site; while substrate binding is in the C-terminal region, which determines specificity. The standard reaction mechanism is a 4-pro-S hydride transfer and proton relay involving the conserved Tyr and Lys, a water molecule stabilized by Asn, and nicotinamide. Atypical SDRs generally lack the catalytic residues characteristic of the SDRs, and their glycine-rich NAD(P)-binding motif is often different from the forms normally seen in classical or extended SDRs. Complex (multidomain) SDRs such as ketoreductase domains of fatty acid sythase have a GGXGXXG NAD(P)-binding motif and an altered active site motif (YXXXN). Fungal type ketoacyl reductases have a TGXXXGX(1-2)G NAD(P)-binding motif. Length = 331

>gnl|CDD|216283 pfam01073, 3Beta_HSD, 3-beta hydroxysteroid dehydrogenase/isomerase family

 Score =  122 bits (309), Expect = 1e-32
 Identities = 47/110 (42%), Positives = 61/110 (55%), Gaps = 5/110 (4%)

Query: 73  LYTCAVRPAAIYGPGEERHLPRIVSLAKLGLVPFKIGEPSVKTDWIYVDNLVLALILASM 132
           LYTCA+RPA I+G G+    P +V L K GL  F+ G+ +V +D +YV N+  A ILA+ 
Sbjct: 171 LYTCALRPAGIFGEGDPFLFPFLVRLLKNGLAKFRTGDKNVLSDRVYVGNVAWAHILAAR 230

Query: 133 GLLDDIPGQKGRPIASGQPYFVSDGFPIN-TFEFIGPLLKTLDYDLPKSW 181
            L D     K     +GQ YF+SD  P N   +F   LLK L   LP S 
Sbjct: 231 ALQD----PKKASSIAGQFYFISDDTPHNSYDDFNRTLLKALGLRLPSSI 276

The enzyme 3 beta-hydroxysteroid dehydrogenase/5-ene-4-ene isomerase (3 beta-HSD) catalyzes the oxidation and isomerisation of 5-ene-3 beta-hydroxypregnene and 5-ene-hydroxyandrostene steroid precursors into the corresponding 4-ene-ketosteroids necessary for the formation of all classes of steroid hormones. Length = 280

>gnl|CDD|187673 cd09813, 3b-HSD-NSDHL-like_SDR_e, human NSDHL (NAD(P)H steroid dehydrogenase-like protein)-like, extended (e) SDRs

 Score =  114 bits (287), Expect = 5e-29
 Identities = 62/192 (32%), Positives = 100/192 (52%), Gaps = 14/192 (7%)

Query: 65  LRKNNR-KCLYTCAVRPAAIYGPGEERHLPRIVSLAKLGLVPFKIGEPSVKTDWIYVDNL 123
           L+ N+    L TCA+RPA I+GPG+ + +P ++  AK G   F+IG+ +   D+ YV+N+
Sbjct: 153 LKANDPESGLLTCALRPAGIFGPGDRQLVPGLLKAAKNGKTKFQIGDGNNLFDFTYVENV 212

Query: 124 VLALILASMGLLDDIPGQKGRPIASGQPYFVSDGFPINTFEFIGPLLKTLDYDLPKSW-L 182
             A ILA+  LL            +G+ +F+++  PI  ++F   + + L Y+ P S  L
Sbjct: 213 AHAHILAADALLS----SSHAETVAGEAFFITNDEPIYFWDFARAIWEGLGYERPPSIKL 268

Query: 183 AVPHALFLGKVFSFFYSVLYPWLNRWWLPQPLILPAEVYKVGVTHYFSLLKAKDELCYVP 242
             P AL+L  +  +   VL          +P   P  V  +  T YF++ KAK  L Y P
Sbjct: 269 PRPVALYLASLLEWTCKVLG--------KEPTFTPFRVALLCSTRYFNIEKAKKRLGYTP 320

Query: 243 IVSPREGMAATI 254
           +V+  EG+  T+
Sbjct: 321 VVTLEEGIERTL 332

This subgroup includes human NSDHL and related proteins. These proteins have the characteristic active site tetrad of extended SDRs, and also have a close match to their NAD(P)-binding motif. Human NSDHL is a 3beta-hydroxysteroid dehydrogenase (3 beta-HSD) which functions in the cholesterol biosynthetic pathway. 3 beta-HSD catalyzes the oxidative conversion of delta 5-3 beta-hydroxysteroids to the delta 4-3-keto configuration; this activity is essential for the biosynthesis of all classes of hormonal steroids. Mutations in the gene encoding NSDHL cause CHILD syndrome (congenital hemidysplasia with ichthyosiform nevus and limb defects), an X-linked dominant, male-lethal trait. This subgroup also includes an unusual bifunctional [3beta-hydroxysteroid dehydrogenase (3b-HSD)/C-4 decarboxylase from Arabidopsis thaliana, and Saccharomyces cerevisiae ERG26, a 3b-HSD/C-4 decarboxylase, involved in the synthesis of ergosterol, the major sterol of yeast. Extended SDRs are distinct from classical SDRs. In addition to the Rossmann fold (alpha/beta folding pattern with a central beta-sheet) core region typical of all SDRs, extended SDRs have a less conserved C-terminal extension of approximately 100 amino acids. Extended SDRs are a diverse collection of proteins, and include isomerases, epimerases, oxidoreductases, and lyases; they typically have a TGXXGXXG cofactor binding motif. SDRs are a functionally diverse family of oxidoreductases that have a single domain with a structurally conserved Rossmann fold, an NAD(P)(H)-binding region, and a structurally diverse C-terminal region. Sequence identity between different SDR enzymes is typically in the 15-30% range; they catalyze a wide range of activities including the metabolism of steroids, cofactors, carbohydrates, lipids, aromatic compounds, and amino acids, and act in redox sensing. Classical SDRs have an TGXXX[AG]XG cofactor binding motif and a YXXXK active site motif, with the Tyr residue of the active site motif serving as a critical catalytic residue (Tyr-151, human 15-hydroxyprostaglandin dehydrogenase numbering). In addition to the Tyr and Lys, there is often an upstream Ser and/or an Asn, contributing to the active site; while substrate binding is in the C-terminal region, which determines specificity. The standard reaction mechanism is a 4-pro-S hydride transfer and proton relay involving the conserved Tyr and Lys, a water molecule stabilized by Asn, and nicotinamide. Atypical SDRs generally lack the catalytic residues characteristic of the SDRs, and their glycine-rich NAD(P)-binding motif is often different from the forms normally seen in classical or extended SDRs. Complex (multidomain) SDRs such as ketoreductase domains of fatty acid sythase have a GGXGXXG NAD(P)-binding motif and an altered active site motif (YXXXN). Fungal type ketoacyl reductases have a TGXXXGX(1-2)G NAD(P)-binding motif. Length = 335

>gnl|CDD|187671 cd09811, 3b-HSD_HSDB1_like_SDR_e, human 3beta-HSD (hydroxysteroid dehydrogenase) and HSD3B1(delta 5-delta 4-isomerase)-like, extended (e) SDRs

 Score = 70.6 bits (173), Expect = 2e-13
 Identities = 57/191 (29%), Positives = 78/191 (40%), Gaps = 21/191 (10%)

Query: 73  LYTCAVRPAAIYGPGEERHLPRIVSLAKLGLVPFKIGEPSVKTDWIYVDNLVLALILASM 132
           L TCA+RP  IYG G          L       F   + S     +YV N+  A ILA+ 
Sbjct: 177 LVTCALRPMYIYGEGSHFLTEIFDFLLTNNGWLFPRIKGSGVNPLVYVGNVAWAHILAAK 236

Query: 133 GLLDDIPGQKGRPIASGQPYFVSDGFPINTFE-FIGPLLKTLDYDLPKSWLAVPHALFLG 191
            L      Q       GQ YF+SD  P N++  F   LLK L   L  SW  VP  L   
Sbjct: 237 AL------QVPDKAIRGQFYFISDDTPHNSYSDFNYELLKELGLRLKTSWWYVPLFLL-- 288

Query: 192 KVFSFFYSVLYPWLNRWWLPQPL---ILPAEVYKVGVTH---YFSLLKAKDELCYVPIVS 245
               +F + L   ++  +L +P          + V +T+    FS LKA+    Y+P+ S
Sbjct: 289 ----YFLAFLLEIVS--FLLRPYVKYRPRYNRHAVALTNSMFTFSYLKAQRHFGYMPLFS 342

Query: 246 PREGMAATISY 256
             E    T  +
Sbjct: 343 WEESKERTAKW 353

This extended-SDR subgroup includes human 3 beta-HSD/HSD3B1 and C(27) 3beta-HSD/ [3beta-hydroxy-delta(5)-C(27)-steroid oxidoreductase; HSD3B7], and related proteins. These proteins have the characteristic active site tetrad and NAD(P)-binding motif of extended SDRs. 3 beta-HSD catalyzes the oxidative conversion of delta 5-3 beta-hydroxysteroids to the delta 4-3-keto configuration; this activity is essential for the biosynthesis of all classes of hormonal steroids. C(27) 3beta-HSD is a membrane-bound enzyme of the endoplasmic reticulum, it catalyzes the isomerization and oxidation of 7alpha-hydroxylated sterol intermediates, an early step in bile acid biosynthesis. Mutations in the human gene encoding C(27) 3beta-HSD underlie a rare autosomal recessive form of neonatal cholestasis. Extended SDRs are distinct from classical SDRs. In addition to the Rossmann fold (alpha/beta folding pattern with a central beta-sheet) core region typical of all SDRs, extended SDRs have a less conserved C-terminal extension of approximately 100 amino acids. Extended SDRs are a diverse collection of proteins, and include isomerases, epimerases, oxidoreductases, and lyases; they typically have a TGXXGXXG cofactor binding motif. SDRs are a functionally diverse family of oxidoreductases that have a single domain with a structurally conserved Rossmann fold, an NAD(P)(H)-binding region, and a structurally diverse C-terminal region. Sequence identity between different SDR enzymes is typically in the 15-30% range; they catalyze a wide range of activities including the metabolism of steroids, cofactors, carbohydrates, lipids, aromatic compounds, and amino acids, and act in redox sensing. Classical SDRs have an TGXXX[AG]XG cofactor binding motif and a YXXXK active site motif, with the Tyr residue of the active site motif serving as a critical catalytic residue (Tyr-151, human 15-hydroxyprostaglandin dehydrogenase numbering). In addition to the Tyr and Lys, there is often an upstream Ser and/or an Asn, contributing to the active site; while substrate binding is in the C-terminal region, which determines specificity. The standard reaction mechanism is a 4-pro-S hydride transfer and proton relay involving the conserved Tyr and Lys, a water molecule stabilized by Asn, and nicotinamide. Atypical SDRs generally lack the catalytic residues characteristic of the SDRs, and their glycine-rich NAD(P)-binding motif is often different from the forms normally seen in classical or extended SDRs. Complex (multidomain) SDRs such as ketoreductase domains of fatty acid sythase have a GGXGXXG NAD(P)-binding motif and an altered active site motif (YXXXN). Fungal type ketoacyl reductases have a TGXXXGX(1-2)G NAD(P)-binding motif. Length = 354

>gnl|CDD|187543 cd05232, UDP_G4E_4_SDR_e, UDP-glucose 4 epimerase, subgroup 4, extended (e) SDRs

 Score = 47.7 bits (114), Expect = 3e-06
 Identities = 31/123 (25%), Positives = 49/123 (39%), Gaps = 17/123 (13%)

Query: 75  TCAVRPAAIYGPGEERHLPRIVSLAKLGLVPFKIGEPSVKTDWIYVDNLVLALILASMGL 134
              +RP  +YGPG   +  R++ L   GL P   G    +   + +DNLV A+ L     
Sbjct: 157 VVILRPPMVYGPGVRGNFARLMRLIDRGL-PLPPGAVKNRRSLVSLDNLVDAIYL----C 211

Query: 135 LDDIPGQKGRPIASGQPYFVSDGFPINTFEFIGPL-----LKTLDYDLPKSWLAVPHALF 189
           +         P A+   + VSDG P++T E +  +       T    +P   L     L 
Sbjct: 212 ISL-------PKAANGTFLVSDGPPVSTAELVDEIRRALGKPTRLLPVPAGLLRFAAKLL 264

Query: 190 LGK 192
             +
Sbjct: 265 GKR 267

UDP-glucose 4 epimerase (aka UDP-galactose-4-epimerase), is a homodimeric extended SDR. It catalyzes the NAD-dependent conversion of UDP-galactose to UDP-glucose, the final step in Leloir galactose synthesis. This subgroup is comprised of bacterial proteins, and includes the Staphylococcus aureus capsular polysaccharide Cap5N, which may have a role in the synthesis of UDP-N-acetyl-d-fucosamine. This subgroup has the characteristic active site tetrad and NAD-binding motif of the extended SDRs. Extended SDRs are distinct from classical SDRs. In addition to the Rossmann fold (alpha/beta folding pattern with a central beta-sheet) core region typical of all SDRs, extended SDRs have a less conserved C-terminal extension of approximately 100 amino acids. Extended SDRs are a diverse collection of proteins, and include isomerases, epimerases, oxidoreductases, and lyases; they typically have a TGXXGXXG cofactor binding motif. SDRs are a functionally diverse family of oxidoreductases that have a single domain with a structurally conserved Rossmann fold, an NAD(P)(H)-binding region, and a structurally diverse C-terminal region. Sequence identity between different SDR enzymes is typically in the 15-30% range; they catalyze a wide range of activities including the metabolism of steroids, cofactors, carbohydrates, lipids, aromatic compounds, and amino acids, and act in redox sensing. Classical SDRs have an TGXXX[AG]XG cofactor binding motif and a YXXXK active site motif, with the Tyr residue of the active site motif serving as a critical catalytic residue (Tyr-151, human 15-hydroxyprostaglandin dehydrogenase numbering). In addition to the Tyr and Lys, there is often an upstream Ser and/or an Asn, contributing to the active site; while substrate binding is in the C-terminal region, which determines specificity. The standard reaction mechanism is a 4-pro-S hydride transfer and proton relay involving the conserved Tyr and Lys, a water molecule stabilized by Asn, and nicotinamide. Atypical SDRs generally lack the catalytic residues characteristic of the SDRs, and their glycine-rich NAD(P)-binding motif is often different from the forms normally seen in classical or extended SDRs. Complex (multidomain) SDRs such as ketoreductase domains of fatty acid synthase have a GGXGXXG NAD(P)-binding motif and an altered active site motif (YXXXN). Fungal type ketoacyl reductases have a TGXXXGX(1-2)G NAD(P)-binding motif. Length = 303

>gnl|CDD|216283 pfam01073, 3Beta_HSD, 3-beta hydroxysteroid dehydrogenase/isomerase family

 Score = 47.7 bits (114), Expect = 4e-06
 Identities = 19/52 (36%), Positives = 25/52 (48%), Gaps = 2/52 (3%)

Query: 15 LVTGGLGHVGSALCLELVRRG-AYQVRAFDLRTNSPWSHLLINHGV-HCIQG 64
          LVTGG G +G  +   L+R G   +VR FDLR +           V   I+G
Sbjct: 1  LVTGGGGFLGRHIVRLLLREGELQEVRVFDLRFSPELLEDFSKLQVITYIEG 52

The enzyme 3 beta-hydroxysteroid dehydrogenase/5-ene-4-ene isomerase (3 beta-HSD) catalyzes the oxidation and isomerisation of 5-ene-3 beta-hydroxypregnene and 5-ene-hydroxyandrostene steroid precursors into the corresponding 4-ene-ketosteroids necessary for the formation of all classes of steroid hormones. Length = 280

>gnl|CDD|223528 COG0451, WcaG, Nucleoside-diphosphate-sugar epimerases [Cell envelope biogenesis, outer membrane / Carbohydrate transport and metabolism]

 Score = 47.2 bits (112), Expect = 6e-06
 Identities = 39/196 (19%), Positives = 63/196 (32%), Gaps = 52/196 (26%)

Query: 75  TCAVRPAAIYGPGEERHLPRIVS------LAKLGLVPFKIGEPSVKTDWIYVDNLVLALI 128
              +RP  +YGPG++  L   V       L K   +    G+ S   D++YVD++  AL+
Sbjct: 164 VVILRPFNVYGPGDKPDLSSGVVSAFIRQLLKGEPIIVIGGDGSQTRDFVYVDDVADALL 223

Query: 129 LASMGLLDDIPGQKGRPIASGQPYFVSDG-FPINTFEFIGPLLKTLDYDLPKSWLAVPHA 187
           LA                  G  + +  G   I   E    + + +    P         
Sbjct: 224 LALEN-------------PDGGVFNIGSGTAEITVRELAEAVAEAVGSKAP--------- 261

Query: 188 LFLGKVFSFFYSVLYPWLNRWWLPQPLILPAEVYKVGVTHYFSLLKAKDELCYVPIVSPR 247
                       V  P   R  L +                  + KA+  L + P VS  
Sbjct: 262 ----------LIVYIPLGRRGDLREGK-------------LLDISKARAALGWEPKVSLE 298

Query: 248 EGMAATISYWQDRKRK 263
           EG+A T+ +   +   
Sbjct: 299 EGLADTLEWLLKKLEL 314

Length = 314

>gnl|CDD|187548 cd05237, UDP_invert_4-6DH_SDR_e, UDP-Glcnac (UDP-linked N-acetylglucosamine) inverting 4,6-dehydratase, extended (e) SDRs

 Score = 45.7 bits (109), Expect = 2e-05
 Identities = 15/34 (44%), Positives = 23/34 (67%)

Query: 10 EGKTFLVTGGLGHVGSALCLELVRRGAYQVRAFD 43
          +GKT LVTGG G +GS L  ++++ G  ++  FD
Sbjct: 1  KGKTILVTGGAGSIGSELVRQILKFGPKKLIVFD 34

UDP-Glcnac inverting 4,6-dehydratase was identified in Helicobacter pylori as the hexameric flaA1 gene product (FlaA1). FlaA1 is hexameric, possesses UDP-GlcNAc-inverting 4,6-dehydratase activity, and catalyzes the first step in the creation of a pseudaminic acid derivative in protein glycosylation. Although this subgroup has the NADP-binding motif characteristic of extended SDRs, its members tend to have a Met substituted for the active site Tyr found in most SDR families. Extended SDRs are distinct from classical SDRs. In addition to the Rossmann fold (alpha/beta folding pattern with a central beta-sheet) core region typical of all SDRs, extended SDRs have a less conserved C-terminal extension of approximately 100 amino acids. Extended SDRs are a diverse collection of proteins, and include isomerases, epimerases, oxidoreductases, and lyases; they typically have a TGXXGXXG cofactor binding motif. SDRs are a functionally diverse family of oxidoreductases that have a single domain with a structurally conserved Rossmann fold, an NAD(P)(H)-binding region, and a structurally diverse C-terminal region. Sequence identity between different SDR enzymes is typically in the 15-30% range; they catalyze a wide range of activities including the metabolism of steroids, cofactors, carbohydrates, lipids, aromatic compounds, and amino acids, and act in redox sensing. Classical SDRs have an TGXXX[AG]XG cofactor binding motif and a YXXXK active site motif, with the Tyr residue of the active site motif serving as a critical catalytic residue (Tyr-151, human 15-hydroxyprostaglandin dehydrogenase numbering). In addition to the Tyr and Lys, there is often an upstream Ser and/or an Asn, contributing to the active site; while substrate binding is in the C-terminal region, which determines specificity. The standard reaction mechanism is a 4-pro-S hydride transfer and proton relay involving the conserved Tyr and Lys, a water molecule stabilized by Asn, and nicotinamide. Atypical SDRs generally lack the catalytic residues characteristic of the SDRs, and their glycine-rich NAD(P)-binding motif is often different from the forms normally seen in classical or extended SDRs. Complex (multidomain) SDRs such as ketoreductase domains of fatty acid synthase have a GGXGXXG NAD(P)-binding motif and an altered active site motif (YXXXN). Fungal type ketoacyl reductases have a TGXXXGX(1-2)G NAD(P)-binding motif. Length = 287

>gnl|CDD|187539 cd05228, AR_FR_like_1_SDR_e, uncharacterized subgroup of aldehyde reductase and flavonoid reductase related proteins, extended (e) SDRs

 Score = 42.7 bits (101), Expect = 1e-04
 Identities = 18/50 (36%), Positives = 25/50 (50%), Gaps = 3/50 (6%)

Query: 15 LVTGGLGHVGSALCLELVRRGAYQVRAFDLRTNSPWSHLLINHGVHCIQG 64
          LVTG  G +GS L   L+ +G Y+VRA     +     LL    V  ++G
Sbjct: 2  LVTGATGFLGSNLVRALLAQG-YRVRALVRSGSDAV--LLDGLPVEVVEG 48

This subgroup contains proteins of unknown function related to aldehyde reductase and flavonoid reductase of the extended SDR-type. Aldehyde reductase I (aka carbonyl reductase) is an NADP-binding SDR; it has an NADP-binding motif consensus that is slightly different from the canonical SDR form and lacks the Asn of the extended SDR active site tetrad. Aldehyde reductase I catalyzes the NADP-dependent reduction of ethyl 4-chloro-3-oxobutanoate to ethyl (R)-4-chloro-3-hydroxybutanoate. The related flavonoid reductases act in the NADP-dependent reduction of flavonoids, ketone-containing plant secondary metabolites. Extended SDRs are distinct from classical SDRs. In addition to the Rossmann fold (alpha/beta folding pattern with a central beta-sheet) core region typical of all SDRs, extended SDRs have a less conserved C-terminal extension of approximately 100 amino acids. Extended SDRs are a diverse collection of proteins, and include isomerases, epimerases, oxidoreductases, and lyases; they typically have a TGXXGXXG cofactor binding motif. SDRs are a functionally diverse family of oxidoreductases that have a single domain with a structurally conserved Rossmann fold, an NAD(P)(H)-binding region, and a structurally diverse C-terminal region. Sequence identity between different SDR enzymes is typically in the 15-30% range; they catalyze a wide range of activities including the metabolism of steroids, cofactors, carbohydrates, lipids, aromatic compounds, and amino acids, and act in redox sensing. Classical SDRs have an TGXXX[AG]XG cofactor binding motif and a YXXXK active site motif, with the Tyr residue of the active site motif serving as a critical catalytic residue (Tyr-151, human 15-hydroxyprostaglandin dehydrogenase numbering). In addition to the Tyr and Lys, there is often an upstream Ser and/or an Asn, contributing to the active site; while substrate binding is in the C-terminal region, which determines specificity. The standard reaction mechanism is a 4-pro-S hydride transfer and proton relay involving the conserved Tyr and Lys, a water molecule stabilized by Asn, and nicotinamide. Atypical SDRs generally lack the catalytic residues characteristic of the SDRs, and their glycine-rich NAD(P)-binding motif is often different from the forms normally seen in classical or extended SDRs. Complex (multidomain) SDRs such as ketoreductase domains of fatty acid synthase have a GGXGXXG NAD(P)-binding motif and an altered active site motif (YXXXN). Fungal type ketoacyl reductases have a TGXXXGX(1-2)G NAD(P)-binding motif. Length = 318

>gnl|CDD|212494 cd08946, SDR_e, extended (e) SDRs

 Score = 41.1 bits (97), Expect = 3e-04
 Identities = 26/104 (25%), Positives = 43/104 (41%), Gaps = 21/104 (20%)

Query: 15  LVTGGLGHVGSALCLELVRRGAYQVRAFDLRT---------------NSPWSHLLINHG- 58
           LVTGG G +GS L   L+ RG ++V   D                  ++P      N   
Sbjct: 2   LVTGGAGFIGSHLVRRLLERG-HEVVVIDRLDVVVHLAALVGVPASWDNPDEDFETNVVG 60

Query: 59  -VHCIQGLRKNN-RKCLY--TCAVRPAAIYGPGEERHLPRIVSL 98
            ++ ++  RK   ++ +Y  + +V  +    P EE   PR +S 
Sbjct: 61  TLNLLEAARKAGVKRFVYASSASVYGSPEGLPEEEETPPRPLSP 104

Extended SDRs are distinct from classical SDRs. In addition to the Rossmann fold (alpha/beta folding pattern with a central beta-sheet) core region typical of all SDRs, extended SDRs have a less conserved C-terminal extension of approximately 100 amino acids. Extended SDRs are a diverse collection of proteins, and include isomerases, epimerases, oxidoreductases, and lyases; they typically have a TGXXGXXG cofactor binding motif. SDRs are a functionally diverse family of oxidoreductases that have a single domain with a structurally conserved Rossmann fold, an NAD(P)(H)-binding region, and a structurally diverse C-terminal region. Sequence identity between different SDR enzymes is typically in the 15-30% range; they catalyze a wide range of activities including the metabolism of steroids, cofactors, carbohydrates, lipids, aromatic compounds, and amino acids, and act in redox sensing. Classical SDRs have an TGXXX[AG]XG cofactor binding motif and a YXXXK active site motif, with the Tyr residue of the active site motif serving as a critical catalytic residue (Tyr-151, human 15-hydroxyprostaglandin dehydrogenase numbering). In addition to the Tyr and Lys, there is often an upstream Ser and/or an Asn, contributing to the active site; while substrate binding is in the C-terminal region, which determines specificity. The standard reaction mechanism is a 4-pro-S hydride transfer and proton relay involving the conserved Tyr and Lys, a water molecule stabilized by Asn, and nicotinamide. Atypical SDRs generally lack the catalytic residues characteristic of the SDRs, and their glycine-rich NAD(P)-binding motif is often different from the forms normally seen in classical or extended SDRs. Complex (multidomain) SDRs such as ketoreductase domains of fatty acid synthase have a GGXGXXG NAD(P)-binding motif and an altered active site motif (YXXXN). Fungal type ketoacyl reductases have a TGXXXGX(1-2)G NAD(P)-binding motif. Length = 200

>gnl|CDD|223528 COG0451, WcaG, Nucleoside-diphosphate-sugar epimerases [Cell envelope biogenesis, outer membrane / Carbohydrate transport and metabolism]

 Score = 41.5 bits (97), Expect = 4e-04
 Identities = 17/45 (37%), Positives = 20/45 (44%), Gaps = 2/45 (4%)

Query: 12 KTFLVTGGLGHVGSALCLELVRRGAYQVRAFDLRTNSPWSHLLIN 56
             LVTGG G +GS L   L+  G + VR  D R       LL  
Sbjct: 1  MRILVTGGAGFIGSHLVERLLAAG-HDVRGLD-RLRDGLDPLLSG 43

Length = 314

>gnl|CDD|187552 cd05241, 3b-HSD-like_SDR_e, 3beta-hydroxysteroid dehydrogenases (3b-HSD)-like, extended (e) SDRs

 Score = 40.1 bits (94), Expect = 0.001
 Identities = 24/90 (26%), Positives = 34/90 (37%), Gaps = 11/90 (12%)

Query: 15 LVTGGLGHVGSALCLELVRRGAYQVRAFDLRTNSPWSHLLINH-GVHCIQG-------LR 66
          LVTGG G  G  L  +L+ RG   VR+FD+      +     H  +  ++G       + 
Sbjct: 3  LVTGGSGFFGERLVKQLLERGGTYVRSFDIAP-PGEALSAWQHPNIEFLKGDITDRNDVE 61

Query: 67 KNNRKCLYTCAVRPAAIYGPGEERHLPRIV 96
          +        C    AAI      R L   V
Sbjct: 62 QALSGA--DCVFHTAAIVPLAGPRDLYWEV 89

Extended SDR family domains belonging to this subgroup have the characteristic active site tetrad and a fairly well-conserved NAD(P)-binding motif. 3b-HSD catalyzes the NAD-dependent conversion of various steroids, such as pregnenolone to progesterone, or androstenediol to testosterone. This subgroup includes an unusual bifunctional 3b-HSD/C-4 decarboxylase from Arabidopsis thaliana, and Saccharomyces cerevisiae ERG26, a 3b-HSD/C-4 decarboxylase, involved in the synthesis of ergosterol, the major sterol of yeast. It also includes human 3 beta-HSD/HSD3B1 and C(27) 3beta-HSD/ [3beta-hydroxy-delta(5)-C(27)-steroid oxidoreductase; HSD3B7]. C(27) 3beta-HSD/HSD3B7 is a membrane-bound enzyme of the endoplasmic reticulum, that catalyzes the isomerization and oxidation of 7alpha-hydroxylated sterol intermediates, an early step in bile acid biosynthesis. Mutations in the human NSDHL (NAD(P)H steroid dehydrogenase-like protein) cause CHILD syndrome (congenital hemidysplasia with ichthyosiform nevus and limb defects), an X-linked dominant, male-lethal trait. Mutations in the human gene encoding C(27) 3beta-HSD underlie a rare autosomal recessive form of neonatal cholestasis. Extended SDRs are distinct from classical SDRs. In addition to the Rossmann fold (alpha/beta folding pattern with a central beta-sheet) core region typical of all SDRs, extended SDRs have a less conserved C-terminal extension of approximately 100 amino acids. Extended SDRs are a diverse collection of proteins, and include isomerases, epimerases, oxidoreductases, and lyases; they typically have a TGXXGXXG cofactor binding motif. SDRs are a functionally diverse family of oxidoreductases that have a single domain with a structurally conserved Rossmann fold, an NAD(P)(H)-binding region, and a structurally diverse C-terminal region. Sequence identity between different SDR enzymes is typically in the 15-30% range; they catalyze a wide range of activities including the metabolism of steroids, cofactors, carbohydrates, lipids, aromatic compounds, and amino acids, and act in redox sensing. Classical SDRs have an TGXXX[AG]XG cofactor binding motif and a YXXXK active site motif, with the Tyr residue of the active site motif serving as a critical catalytic residue (Tyr-151, human 15-hydroxyprostaglandin dehydrogenase numbering). In addition to the Tyr and Lys, there is often an upstream Ser and/or an Asn, contributing to the active site; while substrate binding is in the C-terminal region, which determines specificity. The standard reaction mechanism is a 4-pro-S hydride transfer and proton relay involving the conserved Tyr and Lys, a water molecule stabilized by Asn, and nicotinamide. Atypical SDRs generally lack the catalytic residues characteristic of the SDRs, and their glycine-rich NAD(P)-binding motif is often different from the forms normally seen in classical or extended SDRs. Complex (multidomain) SDRs such as ketoreductase domains of fatty acid sythase have a GGXGXXG NAD(P)-binding motif and an altered active site motif (YXXXN). Fungal type ketoacyl reductases have a TGXXXGX(1-2)G NAD(P)-binding motif. Length = 331

>gnl|CDD|216461 pfam01370, Epimerase, NAD dependent epimerase/dehydratase family

 Score = 40.0 bits (94), Expect = 0.001
 Identities = 15/60 (25%), Positives = 30/60 (50%), Gaps = 5/60 (8%)

Query: 76  CAVRPAAIYGPGEERH-----LPRIVSLAKLGLVPFKIGEPSVKTDWIYVDNLVLALILA 130
             +R   +YGPG         +P ++     G     +G+ + + D++YVD++  A++LA
Sbjct: 161 VILRLFNVYGPGNPDPFVTHVIPALIRRILEGKPILLLGDGTQRRDFLYVDDVARAILLA 220

This family of proteins utilise NAD as a cofactor. The proteins in this family use nucleotide-sugar substrates for a variety of chemical reactions. Length = 233

>gnl|CDD|214833 smart00822, PKS_KR, This enzymatic domain is part of bacterial polyketide synthases

 Score = 37.8 bits (89), Expect = 0.003
 Identities = 14/25 (56%), Positives = 17/25 (68%)

Query: 12 KTFLVTGGLGHVGSALCLELVRRGA 36
           T+L+TGGLG +G AL   L  RGA
Sbjct: 1  GTYLITGGLGGLGRALARWLAERGA 25

It catalyses the first step in the reductive modification of the beta-carbonyl centres in the growing polyketide chain. It uses NADPH to reduce the keto group to a hydroxy group. Length = 180

>gnl|CDD|187554 cd05243, SDR_a5, atypical (a) SDRs, subgroup 5

 Score = 38.0 bits (89), Expect = 0.003
 Identities = 18/42 (42%), Positives = 21/42 (50%), Gaps = 2/42 (4%)

Query: 13 TFLVTGGLGHVGSALCLELVRRGAYQVRAFDLRTNSPWSHLL 54
            LV G  G VG  +  EL+ RG YQVRA  +R  S    L 
Sbjct: 1  KVLVVGATGKVGRHVVRELLDRG-YQVRAL-VRDPSQAEKLE 40

This subgroup contains atypical SDRs, some of which are identified as putative NAD(P)-dependent epimerases, one as a putative NAD-dependent epimerase/dehydratase. Atypical SDRs are distinct from classical SDRs. Members of this subgroup have a glycine-rich NAD(P)-binding motif that is very similar to the extended SDRs, GXXGXXG, and binds NADP. Generally, this subgroup has poor conservation of the active site tetrad; however, individual sequences do contain matches to the YXXXK active site motif, the upstream Ser, and there is a highly conserved Asp in place of the usual active site Asn throughout the subgroup. Atypical SDRs generally lack the catalytic residues characteristic of the SDRs, and their glycine-rich NAD(P)-binding motif is often different from the forms normally seen in classical or extended SDRs. Atypical SDRs include biliverdin IX beta reductase (BVR-B,aka flavin reductase), NMRa (a negative transcriptional regulator of various fungi), progesterone 5-beta-reductase like proteins, phenylcoumaran benzylic ether and pinoresinol-lariciresinol reductases, phenylpropene synthases, eugenol synthase, triphenylmethane reductase, isoflavone reductases, and others. SDRs are a functionally diverse family of oxidoreductases that have a single domain with a structurally conserved Rossmann fold, an NAD(P)(H)-binding region, and a structurally diverse C-terminal region. Sequence identity between different SDR enzymes is typically in the 15-30% range; they catalyze a wide range of activities including the metabolism of steroids, cofactors, carbohydrates, lipids, aromatic compounds, and amino acids, and act in redox sensing. Classical SDRs have an TGXXX[AG]XG cofactor binding motif and a YXXXK active site motif, with the Tyr residue of the active site motif serving as a critical catalytic residue (Tyr-151, human 15-hydroxyprostaglandin dehydrogenase numbering). In addition to the Tyr and Lys, there is often an upstream Ser and/or an Asn, contributing to the active site; while substrate binding is in the C-terminal region, which determines specificity. The standard reaction mechanism is a 4-pro-S hydride transfer and proton relay involving the conserved Tyr and Lys, a water molecule stabilized by Asn, and nicotinamide. In addition to the Rossmann fold core region typical of all SDRs, extended SDRs have a less conserved C-terminal extension of approximately 100 amino acids, and typically have a TGXXGXXG cofactor binding motif. Complex (multidomain) SDRs such as ketoreductase domains of fatty acid synthase have a GGXGXXG NAD(P)-binding motif and an altered active site motif (YXXXN). Fungal type ketoacyl reductases have a TGXXXGX(1-2)G NAD(P)-binding motif. Length = 203

>gnl|CDD|132250 TIGR03206, benzo_BadH, 2-hydroxycyclohexanecarboxyl-CoA dehydrogenase

 Score = 38.0 bits (88), Expect = 0.004
 Identities = 16/36 (44%), Positives = 21/36 (58%), Gaps = 1/36 (2%)

Query: 9  IEGKTFLVTGGLGHVGSALCLELVRRGAYQVRAFDL 44
          ++ KT +VTGG G +G A C      GA +V  FDL
Sbjct: 1  LKDKTAIVTGGGGGIGGATCRRFAEEGA-KVAVFDL 35

Members of this protein family are the enzyme 2-hydroxycyclohexanecarboxyl-CoA dehydrogenase. The enzymatic properties were confirmed experimentally in Rhodopseudomonas palustris; the enzyme is homotetrameric, and not sensitive to oxygen. This enzyme is part of proposed pathway for degradation of benzoyl-CoA to 3-hydroxypimeloyl-CoA that differs from the analogous in Thauera aromatica. It also may occur in degradation of the non-aromatic compound cyclohexane-1-carboxylate. Length = 250

>gnl|CDD|180439 PRK06171, PRK06171, sorbitol-6-phosphate 2-dehydrogenase; Provisional

 Score = 38.1 bits (89), Expect = 0.004
 Identities = 14/42 (33%), Positives = 21/42 (50%), Gaps = 1/42 (2%)

Query: 8  GIEGKTFLVTGGLGHVGSALCLELVRRGAYQVRAFDLRTNSP 49
           ++GK  +VTGG   +G A+  EL+  GA  V   D+     
Sbjct: 6  NLQGKIIIVTGGSSGIGLAIVKELLANGAN-VVNADIHGGDG 46

Length = 266

>gnl|CDD|187561 cd05251, NmrA_like_SDR_a, NmrA (a transcriptional regulator) and HSCARG (an NADPH sensor) like proteins, atypical (a) SDRs

 Score = 38.0 bits (89), Expect = 0.004
 Identities = 16/51 (31%), Positives = 25/51 (49%)

Query: 14 FLVTGGLGHVGSALCLELVRRGAYQVRAFDLRTNSPWSHLLINHGVHCIQG 64
           LV G  G  G ++   L++   ++VRA     +SP +  L   GV  +QG
Sbjct: 1  ILVFGATGKQGGSVVRALLKDPGFKVRALTRDPSSPAAKALAAPGVEVVQG 51

NmrA and HSCARG like proteins. NmrA is a negative transcriptional regulator of various fungi, involved in the post-translational modulation of the GATA-type transcription factor AreA. NmrA lacks the canonical GXXGXXG NAD-binding motif and has altered residues at the catalytic triad, including a Met instead of the critical Tyr residue. NmrA may bind nucleotides but appears to lack any dehydrogenase activity. HSCARG has been identified as a putative NADP-sensing molecule, and redistributes and restructures in response to NADPH/NADP ratios. Like NmrA, it lacks most of the active site residues of the SDR family, but has an NAD(P)-binding motif similar to the extended SDR family, GXXGXXG. SDRs are a functionally diverse family of oxidoreductases that have a single domain with a structurally conserved Rossmann fold, an NAD(P)(H)-binding region, and a structurally diverse C-terminal region. Sequence identity between different SDR enzymes is typically in the 15-30% range; they catalyze a wide range of activities including the metabolism of steroids, cofactors, carbohydrates, lipids, aromatic compounds, and amino acids, and act in redox sensing. Atypical SDRs are distinct from classical SDRs. Classical SDRs have an TGXXX[AG]XG cofactor binding motif and a YXXXK active site motif, with the Tyr residue of the active site motif serving as a critical catalytic residue (Tyr-151, human 15-hydroxyprostaglandin dehydrogenase numbering). In addition to the Tyr and Lys, there is often an upstream Ser and/or an Asn, contributing to the active site; while substrate binding is in the C-terminal region, which determines specificity. The standard reaction mechanism is a 4-pro-S hydride transfer and proton relay involving the conserved Tyr and Lys, a water molecule stabilized by Asn, and nicotinamide. In addition to the Rossmann fold core region typical of all SDRs, extended SDRs have a less conserved C-terminal extension of approximately 100 amino acids, and typically have a TGXXGXXG cofactor binding motif. Complex (multidomain) SDRs such as ketoreductase domains of fatty acid synthase have a GGXGXXG NAD(P)-binding motif and an altered active site motif (YXXXN). Fungal type ketoacyl reductases have a TGXXXGX(1-2)G NAD(P)-binding motif. Length = 242

>gnl|CDD|224011 COG1086, COG1086, Predicted nucleoside-diphosphate sugar epimerases [Cell envelope biogenesis, outer membrane / Carbohydrate transport and metabolism]

 Score = 38.8 bits (91), Expect = 0.004
 Identities = 14/35 (40%), Positives = 22/35 (62%)

Query: 9   IEGKTFLVTGGLGHVGSALCLELVRRGAYQVRAFD 43
           + GKT LVTGG G +GS LC ++++    ++  F 
Sbjct: 248 LTGKTVLVTGGGGSIGSELCRQILKFNPKEIILFS 282

Length = 588

Conserved Domains Detected by HHsearch

Original result of HHsearch against CDD database

ID	Length	Definition	Probability
Query	366
KOG1430	361	consensus C-3 sterol dehydrogenase/3-beta-hydroxys	100.0
COG1088	340	RfbB dTDP-D-glucose 4,6-dehydratase [Cell envelope	99.96
PRK15181	348	Vi polysaccharide biosynthesis protein TviC; Provi	99.95
PF14934	91	DUF4499: Domain of unknown function (DUF4499)	99.94
KOG1429	350	consensus dTDP-glucose 4-6-dehydratase/UDP-glucuro	99.94
PLN02206	442	UDP-glucuronate decarboxylase	99.94
PLN02166	436	dTDP-glucose 4,6-dehydratase	99.94
TIGR03466	328	HpnA hopanoid-associated sugar epimerase. The sequ	99.93
PLN00016	378	RNA-binding protein; Provisional	99.93
COG1087	329	GalE UDP-glucose 4-epimerase [Cell envelope biogen	99.93
PRK10217	355	dTDP-glucose 4,6-dehydratase; Provisional	99.93
PRK11908	347	NAD-dependent epimerase/dehydratase family protein	99.93
PF01073	280	3Beta_HSD: 3-beta hydroxysteroid dehydrogenase/iso	99.93
PLN02695	370	GDP-D-mannose-3',5'-epimerase	99.93
PLN02427	386	UDP-apiose/xylose synthase	99.92
TIGR02622	349	CDP_4_6_dhtase CDP-glucose 4,6-dehydratase. Member	99.92
PRK08125	660	bifunctional UDP-glucuronic acid decarboxylase/UDP	99.92
KOG0747	331	consensus Putative NAD+-dependent epimerases [Carb	99.92
TIGR01472	343	gmd GDP-mannose 4,6-dehydratase. Excluded from thi	99.92
PLN02260	668	probable rhamnose biosynthetic enzyme	99.91
PLN02572	442	UDP-sulfoquinovose synthase	99.91
PLN02653	340	GDP-mannose 4,6-dehydratase	99.91
PLN02240	352	UDP-glucose 4-epimerase	99.91
TIGR01181	317	dTDP_gluc_dehyt dTDP-glucose 4,6-dehydratase. This	99.9
PRK10084	352	dTDP-glucose 4,6 dehydratase; Provisional	99.9
CHL00194	317	ycf39 Ycf39; Provisional	99.89
PLN02214	342	cinnamoyl-CoA reductase	99.88
PRK10675	338	UDP-galactose-4-epimerase; Provisional	99.88
TIGR02197	314	heptose_epim ADP-L-glycero-D-manno-heptose-6-epime	99.88
COG0451	314	WcaG Nucleoside-diphosphate-sugar epimerases [Cell	99.87
PLN00198	338	anthocyanidin reductase; Provisional	99.87
PRK05865	854	hypothetical protein; Provisional	99.87
PLN02989	325	cinnamyl-alcohol dehydrogenase family protein	99.87
PRK09987	299	dTDP-4-dehydrorhamnose reductase; Provisional	99.86
PLN02662	322	cinnamyl-alcohol dehydrogenase family protein	99.86
PRK11150	308	rfaD ADP-L-glycero-D-mannoheptose-6-epimerase; Pro	99.86
TIGR01179	328	galE UDP-glucose-4-epimerase. This enzyme intercon	99.86
PLN02896	353	cinnamyl-alcohol dehydrogenase	99.85
PLN02650	351	dihydroflavonol-4-reductase	99.85
PLN02725	306	GDP-4-keto-6-deoxymannose-3,5-epimerase-4-reductas	99.84
TIGR01214	287	rmlD dTDP-4-dehydrorhamnose reductase. This enzyme	99.84
PLN02986	322	cinnamyl-alcohol dehydrogenase family protein	99.84
PRK07201	657	short chain dehydrogenase; Provisional	99.84
KOG1502	327	consensus Flavonol reductase/cinnamoyl-CoA reducta	99.83
COG1090	297	Predicted nucleoside-diphosphate sugar epimerase [	99.83
TIGR03589	324	PseB UDP-N-acetylglucosamine 4,6-dehydratase. This	99.82
TIGR01777	292	yfcH conserved hypothetical protein TIGR01777. Thi	99.81
COG1089	345	Gmd GDP-D-mannose dehydratase [Cell envelope bioge	99.81
PLN02686	367	cinnamoyl-CoA reductase	99.78
PLN02657	390	3,8-divinyl protochlorophyllide a 8-vinyl reductas	99.77
KOG1371	343	consensus UDP-glucose 4-epimerase/UDP-sulfoquinovo	99.77
PF04321	286	RmlD_sub_bind: RmlD substrate binding domain; Inte	99.77
KOG1431	315	consensus GDP-L-fucose synthetase [Carbohydrate tr	99.76
PF01370	236	Epimerase: NAD dependent epimerase/dehydratase fam	99.72
TIGR03649	285	ergot_EASG ergot alkaloid biosynthesis protein, AF	99.68
COG1091	281	RfbD dTDP-4-dehydrorhamnose reductase [Cell envelo	99.68
PRK12320	699	hypothetical protein; Provisional	99.64
TIGR01746	367	Thioester-redct thioester reductase domain. It has	99.62
PLN02583	297	cinnamoyl-CoA reductase	99.62
PLN02996	491	fatty acyl-CoA reductase	99.61
KOG2865	391	consensus NADH:ubiquinone oxidoreductase, NDUFA9/3	99.58
KOG1372	376	consensus GDP-mannose 4,6 dehydratase [Carbohydrat	99.52
PLN02778	298	3,5-epimerase/4-reductase	99.5
PLN02503	605	fatty acyl-CoA reductase 2	99.4
COG1086	588	Predicted nucleoside-diphosphate sugar epimerases	99.36
PF02719	293	Polysacc_synt_2: Polysaccharide biosynthesis prote	99.29
COG0702	275	Predicted nucleoside-diphosphate-sugar epimerases	99.26
TIGR03443	1389	alpha_am_amid L-aminoadipate-semialdehyde dehydrog	99.19
PF13460	183	NAD_binding_10: NADH(P)-binding ; PDB: 3OH8_A 3E8X	99.13
PRK09135	249	pteridine reductase; Provisional	99.12
PF05368	233	NmrA: NmrA-like family; InterPro: IPR008030 NmrA i	99.12
PLN00141	251	Tic62-NAD(P)-related group II protein; Provisional	99.11
PLN02260	668	probable rhamnose biosynthetic enzyme	99.09
KOG3019	315	consensus Predicted nucleoside-diphosphate sugar e	99.03
PRK12825	249	fabG 3-ketoacyl-(acyl-carrier-protein) reductase;	98.98
PRK12429	258	3-hydroxybutyrate dehydrogenase; Provisional	98.97
PRK13394	262	3-hydroxybutyrate dehydrogenase; Provisional	98.96
PRK05653	246	fabG 3-ketoacyl-(acyl-carrier-protein) reductase;	98.95
PF07993	249	NAD_binding_4: Male sterility protein; InterPro: I	98.94
PRK06482	276	short chain dehydrogenase; Provisional	98.94
KOG1221	467	consensus Acyl-CoA reductase [Lipid transport and	98.93
TIGR01963	255	PHB_DH 3-hydroxybutyrate dehydrogenase. This model	98.93
PRK12826	251	3-ketoacyl-(acyl-carrier-protein) reductase; Revie	98.92
PRK07074	257	short chain dehydrogenase; Provisional	98.91
PRK07067	257	sorbitol dehydrogenase; Provisional	98.88
PRK08263	275	short chain dehydrogenase; Provisional	98.83
PRK05875	276	short chain dehydrogenase; Provisional	98.82
KOG2774	366	consensus NAD dependent epimerase [General functio	98.81
PRK12829	264	short chain dehydrogenase; Provisional	98.81
PRK05876	275	short chain dehydrogenase; Provisional	98.76
PRK12828	239	short chain dehydrogenase; Provisional	98.75
PRK12823	260	benD 1,6-dihydroxycyclohexa-2,4-diene-1-carboxylat	98.72
PRK12745	256	3-ketoacyl-(acyl-carrier-protein) reductase; Provi	98.7
PRK06914	280	short chain dehydrogenase; Provisional	98.66
PRK06077	252	fabG 3-ketoacyl-(acyl-carrier-protein) reductase;	98.66
PRK07806	248	short chain dehydrogenase; Provisional	98.63
PRK07523	255	gluconate 5-dehydrogenase; Provisional	98.63
PRK05557	248	fabG 3-ketoacyl-(acyl-carrier-protein) reductase;	98.62
PRK12935	247	acetoacetyl-CoA reductase; Provisional	98.62
PRK12384	259	sorbitol-6-phosphate dehydrogenase; Provisional	98.62
PRK07774	250	short chain dehydrogenase; Provisional	98.6
PRK08324	681	short chain dehydrogenase; Validated	98.59
PLN03209	576	translocon at the inner envelope of chloroplast su	98.59
PRK07890	258	short chain dehydrogenase; Provisional	98.59
PRK07775	274	short chain dehydrogenase; Provisional	98.58
COG3320	382	Putative dehydrogenase domain of multifunctional n	98.58
PRK06138	252	short chain dehydrogenase; Provisional	98.54
PRK07231	251	fabG 3-ketoacyl-(acyl-carrier-protein) reductase;	98.54
PRK06180	277	short chain dehydrogenase; Provisional	98.53
PRK06182	273	short chain dehydrogenase; Validated	98.49
PRK08220	252	2,3-dihydroxybenzoate-2,3-dehydrogenase; Validated	98.46
PRK06123	248	short chain dehydrogenase; Provisional	98.45
PRK08219	227	short chain dehydrogenase; Provisional	98.44
PRK12746	254	short chain dehydrogenase; Provisional	98.44
PRK07060	245	short chain dehydrogenase; Provisional	98.43
PRK06194	287	hypothetical protein; Provisional	98.43
PRK12939	250	short chain dehydrogenase; Provisional	98.42
PRK06701	290	short chain dehydrogenase; Provisional	98.42
PRK08217	253	fabG 3-ketoacyl-(acyl-carrier-protein) reductase;	98.42
PRK09134	258	short chain dehydrogenase; Provisional	98.42
TIGR03206	250	benzo_BadH 2-hydroxycyclohexanecarboxyl-CoA dehydr	98.41
PRK12827	249	short chain dehydrogenase; Provisional	98.4
COG2910	211	Putative NADH-flavin reductase [General function p	98.4
PRK06128	300	oxidoreductase; Provisional	98.39
PRK08063	250	enoyl-(acyl carrier protein) reductase; Provisiona	98.36
PRK06500	249	short chain dehydrogenase; Provisional	98.36
PRK09730	247	putative NAD(P)-binding oxidoreductase; Provisiona	98.33
PRK06523	260	short chain dehydrogenase; Provisional	98.32
PRK08213	259	gluconate 5-dehydrogenase; Provisional	98.3
PRK08628	258	short chain dehydrogenase; Provisional	98.3
PRK05565	247	fabG 3-ketoacyl-(acyl-carrier-protein) reductase;	98.29
PRK12824	245	acetoacetyl-CoA reductase; Provisional	98.26
PRK09186	256	flagellin modification protein A; Provisional	98.26
PRK06841	255	short chain dehydrogenase; Provisional	98.26
PRK12743	256	oxidoreductase; Provisional	98.25
PRK07326	237	short chain dehydrogenase; Provisional	98.25
PRK06057	255	short chain dehydrogenase; Provisional	98.22
PLN02253	280	xanthoxin dehydrogenase	98.21
TIGR01830	239	3oxo_ACP_reduc 3-oxoacyl-(acyl-carrier-protein) re	98.21
PRK12936	245	3-ketoacyl-(acyl-carrier-protein) reductase NodG;	98.2
PRK07825	273	short chain dehydrogenase; Provisional	98.18
PRK12744	257	short chain dehydrogenase; Provisional	98.17
TIGR01832	248	kduD 2-deoxy-D-gluconate 3-dehydrogenase. This mod	98.15
PRK05717	255	oxidoreductase; Validated	98.15
PRK07856	252	short chain dehydrogenase; Provisional	98.14
PRK08017	256	oxidoreductase; Provisional	98.13
PRK06124	256	gluconate 5-dehydrogenase; Provisional	98.11
PRK06550	235	fabG 3-ketoacyl-(acyl-carrier-protein) reductase;	98.11
PRK07577	234	short chain dehydrogenase; Provisional	98.1
PRK07985	294	oxidoreductase; Provisional	98.09
PRK06113	255	7-alpha-hydroxysteroid dehydrogenase; Validated	98.08
PRK12938	246	acetyacetyl-CoA reductase; Provisional	98.07
PRK06198	260	short chain dehydrogenase; Provisional	98.06
PRK05650	270	short chain dehydrogenase; Provisional	98.05
PRK05786	238	fabG 3-ketoacyl-(acyl-carrier-protein) reductase;	98.04
PRK08226	263	short chain dehydrogenase; Provisional	98.03
PRK06114	254	short chain dehydrogenase; Provisional	98.03
PRK06181	263	short chain dehydrogenase; Provisional	98.02
PRK08642	253	fabG 3-ketoacyl-(acyl-carrier-protein) reductase;	98.0
PRK10538	248	malonic semialdehyde reductase; Provisional	98.0
PRK08085	254	gluconate 5-dehydrogenase; Provisional	98.0
PRK12937	245	short chain dehydrogenase; Provisional	97.99
TIGR01829	242	AcAcCoA_reduct acetoacetyl-CoA reductase. (R)-3-hy	97.98
PRK09291	257	short chain dehydrogenase; Provisional	97.98
PRK08643	256	acetoin reductase; Validated	97.98
PRK07666	239	fabG 3-ketoacyl-(acyl-carrier-protein) reductase;	97.97
KOG4288	283	consensus Predicted oxidoreductase [General functi	97.92
TIGR02632	676	RhaD_aldol-ADH rhamnulose-1-phosphate aldolase/alc	97.91
PRK06935	258	2-deoxy-D-gluconate 3-dehydrogenase; Provisional	97.9
PRK08589	272	short chain dehydrogenase; Validated	97.89
PRK07063	260	short chain dehydrogenase; Provisional	97.87
PRK06172	253	short chain dehydrogenase; Provisional	97.84
PRK09242	257	tropinone reductase; Provisional	97.83
PRK07097	265	gluconate 5-dehydrogenase; Provisional	97.82
PRK08339	263	short chain dehydrogenase; Provisional	97.82
PRK06463	255	fabG 3-ketoacyl-(acyl-carrier-protein) reductase;	97.81
PRK08264	238	short chain dehydrogenase; Validated	97.77
PRK06179	270	short chain dehydrogenase; Provisional	97.77
PRK07069	251	short chain dehydrogenase; Validated	97.74
PRK07023	243	short chain dehydrogenase; Provisional	97.74
PF13950	62	Epimerase_Csub: UDP-glucose 4-epimerase C-term sub	97.74
PRK07109	334	short chain dehydrogenase; Provisional	97.72
PRK07831	262	short chain dehydrogenase; Provisional	97.71
PRK07677	252	short chain dehydrogenase; Provisional	97.7
PRK12748	256	3-ketoacyl-(acyl-carrier-protein) reductase; Provi	97.68
PRK07041	230	short chain dehydrogenase; Provisional	97.67
PRK06101	240	short chain dehydrogenase; Provisional	97.64
PRK07102	243	short chain dehydrogenase; Provisional	97.64
PRK05993	277	short chain dehydrogenase; Provisional	97.61
PRK06398	258	aldose dehydrogenase; Validated	97.61
PRK08267	260	short chain dehydrogenase; Provisional	97.61
PRK06139	330	short chain dehydrogenase; Provisional	97.6
KOG1203	411	consensus Predicted dehydrogenase [Carbohydrate tr	97.59
PRK08265	261	short chain dehydrogenase; Provisional	97.56
PRK06924	251	short chain dehydrogenase; Provisional	97.56
PRK09072	263	short chain dehydrogenase; Provisional	97.53
PRK08936	261	glucose-1-dehydrogenase; Provisional	97.51
PRK05693	274	short chain dehydrogenase; Provisional	97.51
PRK08945	247	putative oxoacyl-(acyl carrier protein) reductase;	97.51
PRK06196	315	oxidoreductase; Provisional	97.5
COG0300	265	DltE Short-chain dehydrogenases of various substra	97.49
PRK07814	263	short chain dehydrogenase; Provisional	97.49
TIGR02415	254	23BDH acetoin reductases. One member of this famil	97.47
TIGR03325	262	BphB_TodD cis-2,3-dihydrobiphenyl-2,3-diol dehydro	97.46
PRK12742	237	oxidoreductase; Provisional	97.44
PRK06953	222	short chain dehydrogenase; Provisional	97.42
PRK08177	225	short chain dehydrogenase; Provisional	97.42
PRK07024	257	short chain dehydrogenase; Provisional	97.4
PRK07904	253	short chain dehydrogenase; Provisional	97.4
PRK06484	520	short chain dehydrogenase; Validated	97.39
PRK12367	245	short chain dehydrogenase; Provisional	97.38
PRK06171	266	sorbitol-6-phosphate 2-dehydrogenase; Provisional	97.38
PRK07454	241	short chain dehydrogenase; Provisional	97.37
PRK06200	263	2,3-dihydroxy-2,3-dihydrophenylpropionate dehydrog	97.37
PRK06483	236	dihydromonapterin reductase; Provisional	97.34
PRK08703	239	short chain dehydrogenase; Provisional	97.34
PRK08993	253	2-deoxy-D-gluconate 3-dehydrogenase; Validated	97.32
PRK08278	273	short chain dehydrogenase; Provisional	97.32
PRK07478	254	short chain dehydrogenase; Provisional	97.32
PRK06197	306	short chain dehydrogenase; Provisional	97.3
PRK12481	251	2-deoxy-D-gluconate 3-dehydrogenase; Provisional	97.28
PRK06949	258	short chain dehydrogenase; Provisional	97.27
PRK05866	293	short chain dehydrogenase; Provisional	97.24
PRK08251	248	short chain dehydrogenase; Provisional	97.23
PRK08277	278	D-mannonate oxidoreductase; Provisional	97.22
COG4221	246	Short-chain alcohol dehydrogenase of unknown speci	97.17
PRK07453	322	protochlorophyllide oxidoreductase; Validated	97.14
PRK06947	248	glucose-1-dehydrogenase; Provisional	97.12
PRK07035	252	short chain dehydrogenase; Provisional	97.12
PRK05867	253	short chain dehydrogenase; Provisional	97.1
PRK07576	264	short chain dehydrogenase; Provisional	97.09
PRK05854	313	short chain dehydrogenase; Provisional	97.07
PRK07792	306	fabG 3-ketoacyl-(acyl-carrier-protein) reductase;	97.04
PRK09620	229	hypothetical protein; Provisional	97.02
PRK08416	260	7-alpha-hydroxysteroid dehydrogenase; Provisional	96.97
PRK08261	450	fabG 3-ketoacyl-(acyl-carrier-protein) reductase;	96.93
PRK07424	406	bifunctional sterol desaturase/short chain dehydro	96.92
PRK09009	235	C factor cell-cell signaling protein; Provisional	96.9
PRK08309	177	short chain dehydrogenase; Provisional	96.89
PRK12747	252	short chain dehydrogenase; Provisional	96.89
KOG4039	238	consensus Serine/threonine kinase TIP30/CC3 [Signa	96.82
smart00822	180	PKS_KR This enzymatic domain is part of bacterial	96.81
COG3967	245	DltE Short-chain dehydrogenase involved in D-alani	96.79
PRK07062	265	short chain dehydrogenase; Provisional	96.78
PRK06079	252	enoyl-(acyl carrier protein) reductase; Provisiona	96.71
PRK05872	296	short chain dehydrogenase; Provisional	96.71
PRK06125	259	short chain dehydrogenase; Provisional	96.7
PF00106	167	adh_short: short chain dehydrogenase alcohol dehyd	96.65
PRK05884	223	short chain dehydrogenase; Provisional	96.65
KOG1201	300	consensus Hydroxysteroid 17-beta dehydrogenase 11	96.63
TIGR01831	239	fabG_rel 3-oxoacyl-(acyl-carrier-protein) reductas	96.62
PRK05855	582	short chain dehydrogenase; Validated	96.55
PRK08340	259	glucose-1-dehydrogenase; Provisional	96.52
TIGR02685	267	pter_reduc_Leis pteridine reductase. Pteridine red	96.52
PLN02780	320	ketoreductase/ oxidoreductase	96.51
PRK07832	272	short chain dehydrogenase; Provisional	96.49
PRK06720	169	hypothetical protein; Provisional	96.45
PRK07201	657	short chain dehydrogenase; Provisional	96.36
PRK07791	286	short chain dehydrogenase; Provisional	96.36
PRK07889	256	enoyl-(acyl carrier protein) reductase; Provisiona	96.33
PRK08303	305	short chain dehydrogenase; Provisional	96.24
KOG1205	282	consensus Predicted dehydrogenase [Secondary metab	96.2
KOG1200	256	consensus Mitochondrial/plastidial beta-ketoacyl-A	96.18
PRK14982	340	acyl-ACP reductase; Provisional	96.17
PRK06732	229	phosphopantothenate--cysteine ligase; Validated	96.07
PRK08594	257	enoyl-(acyl carrier protein) reductase; Provisiona	96.05
PRK07984	262	enoyl-(acyl carrier protein) reductase; Provisiona	96.01
PRK08862	227	short chain dehydrogenase; Provisional	95.95
PRK06484	520	short chain dehydrogenase; Validated	95.92
PRK07578	199	short chain dehydrogenase; Provisional	95.85
PRK06505	271	enoyl-(acyl carrier protein) reductase; Provisiona	95.84
PRK07533	258	enoyl-(acyl carrier protein) reductase; Provisiona	95.78
PRK12859	256	3-ketoacyl-(acyl-carrier-protein) reductase; Provi	95.72
PRK08415	274	enoyl-(acyl carrier protein) reductase; Provisiona	95.68
TIGR01289	314	LPOR light-dependent protochlorophyllide reductase	95.66
PRK08690	261	enoyl-(acyl carrier protein) reductase; Provisiona	95.61
PF08659	181	KR: KR domain; InterPro: IPR013968 This domain is	95.59
COG1028	251	FabG Dehydrogenases with different specificities (	95.58
KOG1208	314	consensus Dehydrogenases with different specificit	95.53
COG1748	389	LYS9 Saccharopine dehydrogenase and related protei	95.45
cd01336	325	MDH_cytoplasmic_cytosolic Cytoplasmic and cytosoli	95.4
KOG4169	261	consensus 15-hydroxyprostaglandin dehydrogenase an	95.34
PRK05599	246	hypothetical protein; Provisional	95.33
PRK06603	260	enoyl-(acyl carrier protein) reductase; Provisiona	95.32
PRK05579	399	bifunctional phosphopantothenoylcysteine decarboxy	95.29
cd01078	194	NAD_bind_H4MPT_DH NADP binding domain of methylene	95.26
TIGR01915	219	npdG NADPH-dependent F420 reductase. This model re	95.02
TIGR00715	256	precor6x_red precorrin-6x reductase. This enzyme w	94.91
PRK07370	258	enoyl-(acyl carrier protein) reductase; Validated	94.87
KOG1209	289	consensus 1-Acyl dihydroxyacetone phosphate reduct	94.83
PRK06997	260	enoyl-(acyl carrier protein) reductase; Provisiona	94.82
PRK08159	272	enoyl-(acyl carrier protein) reductase; Provisiona	94.78
PRK06940	275	short chain dehydrogenase; Provisional	94.77
PRK08664	349	aspartate-semialdehyde dehydrogenase; Reviewed	94.59
PF00056	141	Ldh_1_N: lactate/malate dehydrogenase, NAD binding	94.49
PF01118	121	Semialdhyde_dh: Semialdehyde dehydrogenase, NAD bi	94.47
PRK14874	334	aspartate-semialdehyde dehydrogenase; Provisional	94.46
TIGR01500	256	sepiapter_red sepiapterin reductase. This model de	94.17
KOG0725	270	consensus Reductases with broad range of substrate	94.17
PRK05671	336	aspartate-semialdehyde dehydrogenase; Reviewed	93.97
PTZ00325	321	malate dehydrogenase; Provisional	93.69
PRK14106	450	murD UDP-N-acetylmuramoyl-L-alanyl-D-glutamate syn	93.67
PRK11199	374	tyrA bifunctional chorismate mutase/prephenate deh	93.51
PLN02730	303	enoyl-[acyl-carrier-protein] reductase	93.17
KOG1207	245	consensus Diacetyl reductase/L-xylulose reductase	93.03
COG0569	225	TrkA K+ transport systems, NAD-binding component [	93.02
PRK06849	389	hypothetical protein; Provisional	92.93
PRK06129	308	3-hydroxyacyl-CoA dehydrogenase; Validated	92.76
PLN00106	323	malate dehydrogenase	92.74
KOG1610	322	consensus Corticosteroid 11-beta-dehydrogenase and	92.68
PRK02472	447	murD UDP-N-acetylmuramoyl-L-alanyl-D-glutamate syn	92.66
PLN02968	381	Probable N-acetyl-gamma-glutamyl-phosphate reducta	92.52
cd01075	200	NAD_bind_Leu_Phe_Val_DH NAD(P) binding domain of l	92.42
KOG1199	260	consensus Short-chain alcohol dehydrogenase/3-hydr	92.38
KOG1611	249	consensus Predicted short chain-type dehydrogenase	92.23
PRK00436	343	argC N-acetyl-gamma-glutamyl-phosphate reductase;	92.19
KOG1014	312	consensus 17 beta-hydroxysteroid dehydrogenase typ	92.19
PF03721	185	UDPG_MGDP_dh_N: UDP-glucose/GDP-mannose dehydrogen	92.09
PRK09496	453	trkA potassium transporter peripheral membrane com	92.01
PF04127	185	DFP: DNA / pantothenate metabolism flavoprotein; I	91.97
PRK04148	134	hypothetical protein; Provisional	91.8
PRK08655	437	prephenate dehydrogenase; Provisional	91.79
PRK09496	453	trkA potassium transporter peripheral membrane com	91.66
PLN00015	308	protochlorophyllide reductase	91.59
PF01488	135	Shikimate_DH: Shikimate / quinate 5-dehydrogenase;	91.33
TIGR00521	390	coaBC_dfp phosphopantothenoylcysteine decarboxylas	91.27
PRK06300	299	enoyl-(acyl carrier protein) reductase; Provisiona	91.17
cd05294	309	LDH-like_MDH_nadp A lactate dehydrogenases-like st	91.08
PRK08040	336	putative semialdehyde dehydrogenase; Provisional	91.0
PRK11064	415	wecC UDP-N-acetyl-D-mannosamine dehydrogenase; Pro	90.91
COG2085	211	Predicted dinucleotide-binding enzymes [General fu	90.87
PRK12548	289	shikimate 5-dehydrogenase; Provisional	90.76
cd01337	310	MDH_glyoxysomal_mitochondrial Glyoxysomal and mito	90.7
COG0039	313	Mdh Malate/lactate dehydrogenases [Energy producti	90.6
PRK08818	370	prephenate dehydrogenase; Provisional	90.29
cd00704	323	MDH Malate dehydrogenase. Malate dehydrogenase (MD	90.16
cd01065	155	NAD_bind_Shikimate_DH NAD(P) binding domain of Shi	89.81
PF03435	386	Saccharop_dh: Saccharopine dehydrogenase ; InterPr	89.74
PLN02383	344	aspartate semialdehyde dehydrogenase	89.68
PRK05442	326	malate dehydrogenase; Provisional	89.65
PF02737	180	3HCDH_N: 3-hydroxyacyl-CoA dehydrogenase, NAD bind	89.55
PF03446	163	NAD_binding_2: NAD binding domain of 6-phosphogluc	89.5
PRK06444	197	prephenate dehydrogenase; Provisional	89.32
TIGR02114	227	coaB_strep phosphopantothenate--cysteine ligase, s	89.27
cd01485	198	E1-1_like Ubiquitin activating enzyme (E1), repeat	89.1
PRK05086	312	malate dehydrogenase; Provisional	89.03
TIGR01296	339	asd_B aspartate-semialdehyde dehydrogenase (peptid	88.95
PRK14619	308	NAD(P)H-dependent glycerol-3-phosphate dehydrogena	88.86
PLN02256	304	arogenate dehydrogenase	88.82
TIGR00978	341	asd_EA aspartate-semialdehyde dehydrogenase (non-p	88.57
cd01080	168	NAD_bind_m-THF_DH_Cyclohyd NADP binding domain of	88.49
PF02254	116	TrkA_N: TrkA-N domain; InterPro: IPR003148 The reg	88.41
TIGR01758	324	MDH_euk_cyt malate dehydrogenase, NAD-dependent. T	88.39
PLN02602	350	lactate dehydrogenase	88.37
TIGR01850	346	argC N-acetyl-gamma-glutamyl-phosphate reductase,	88.32
cd01338	322	MDH_choloroplast_like Chloroplast-like malate dehy	88.32
PRK07819	286	3-hydroxybutyryl-CoA dehydrogenase; Validated	88.24
PRK08293	287	3-hydroxybutyryl-CoA dehydrogenase; Validated	88.23
PRK06718	202	precorrin-2 dehydrogenase; Reviewed	87.85
TIGR01772	312	MDH_euk_gproteo malate dehydrogenase, NAD-dependen	87.81
PRK00066	315	ldh L-lactate dehydrogenase; Reviewed	87.76
PRK06223	307	malate dehydrogenase; Reviewed	87.75
PRK05808	282	3-hydroxybutyryl-CoA dehydrogenase; Validated	87.74
cd01492	197	Aos1_SUMO Ubiquitin activating enzyme (E1) subunit	87.71
PRK00094	325	gpsA NAD(P)H-dependent glycerol-3-phosphate dehydr	87.6
COG1004	414	Ugd Predicted UDP-glucose 6-dehydrogenase [Cell en	87.38
PRK06728	347	aspartate-semialdehyde dehydrogenase; Provisional	87.19
PRK00258	278	aroE shikimate 5-dehydrogenase; Reviewed	87.03
cd05191	86	NAD_bind_amino_acid_DH NAD(P) binding domain of am	86.98
PRK11863	313	N-acetyl-gamma-glutamyl-phosphate reductase; Provi	86.66
PF00070	80	Pyr_redox: Pyridine nucleotide-disulphide oxidored	86.66
PRK07417	279	arogenate dehydrogenase; Reviewed	86.59
PTZ00082	321	L-lactate dehydrogenase; Provisional	86.49
PRK14192	283	bifunctional 5,10-methylene-tetrahydrofolate dehyd	86.48
PRK08229	341	2-dehydropantoate 2-reductase; Provisional	86.37
PRK12409	410	D-amino acid dehydrogenase small subunit; Provisio	86.37
PF01113	124	DapB_N: Dihydrodipicolinate reductase, N-terminus;	86.19
KOG1210	331	consensus Predicted 3-ketosphinganine reductase [S	86.12
PRK06522	304	2-dehydropantoate 2-reductase; Reviewed	86.02
PRK09260	288	3-hydroxybutyryl-CoA dehydrogenase; Validated	85.88
PRK04308	445	murD UDP-N-acetylmuramoyl-L-alanyl-D-glutamate syn	85.87
PRK14194	301	bifunctional 5,10-methylene-tetrahydrofolate dehyd	85.82
PRK07530	292	3-hydroxybutyryl-CoA dehydrogenase; Validated	85.81
PF10727	127	Rossmann-like: Rossmann-like domain; InterPro: IPR	85.78
PRK13656	398	trans-2-enoyl-CoA reductase; Provisional	85.73
PRK06249	313	2-dehydropantoate 2-reductase; Provisional	85.7
PLN02545	295	3-hydroxybutyryl-CoA dehydrogenase	85.68
PRK12475	338	thiamine/molybdopterin biosynthesis MoeB-like prot	85.61
PF02826	178	2-Hacid_dh_C: D-isomer specific 2-hydroxyacid dehy	85.52
PRK14175	286	bifunctional 5,10-methylene-tetrahydrofolate dehyd	85.47
TIGR02354	200	thiF_fam2 thiamine biosynthesis protein ThiF, fami	85.19
TIGR01759	323	MalateDH-SF1 malate dehydrogenase. This model repr	85.01
KOG4022	236	consensus Dihydropteridine reductase DHPR/QDPR [Am	84.62
PRK07688	339	thiamine/molybdopterin biosynthesis ThiF/MoeB-like	84.52
PRK13553	258	fumarate reductase cytochrome b-556 subunit; Provi	84.51
PRK02006	498	murD UDP-N-acetylmuramoyl-L-alanyl-D-glutamate syn	84.41
PTZ00117	319	malate dehydrogenase; Provisional	84.16
KOG4288	283	consensus Predicted oxidoreductase [General functi	83.9
PRK07502	307	cyclohexadienyl dehydrogenase; Validated	83.86
PRK06035	291	3-hydroxyacyl-CoA dehydrogenase; Validated	83.71
cd08259	332	Zn_ADH5 Alcohol dehydrogenases of the MDR family.	83.58
PRK01438	480	murD UDP-N-acetylmuramoyl-L-alanyl-D-glutamate syn	83.56
TIGR01470	205	cysG_Nterm siroheme synthase, N-terminal domain. T	83.46
PF13241	103	NAD_binding_7: Putative NAD(P)-binding; PDB: 3DFZ_	83.41
TIGR03026	411	NDP-sugDHase nucleotide sugar dehydrogenase. All o	83.27
PRK14618	328	NAD(P)H-dependent glycerol-3-phosphate dehydrogena	82.93
PRK10669	558	putative cation:proton antiport protein; Provision	82.8
cd08295	338	double_bond_reductase_like Arabidopsis alkenal dou	82.38
PRK06598	369	aspartate-semialdehyde dehydrogenase; Reviewed	82.32
TIGR02853	287	spore_dpaA dipicolinic acid synthetase, A subunit.	82.09
cd05292	308	LDH_2 A subgroup of L-lactate dehydrogenases. L-la	82.07
cd05293	312	LDH_1 A subgroup of L-lactate dehydrogenases. L-la	81.97
cd05212	140	NAD_bind_m-THF_DH_Cyclohyd_like NAD(P) binding dom	81.7
PRK14188	296	bifunctional 5,10-methylene-tetrahydrofolate dehyd	81.64
KOG1478	341	consensus 3-keto sterol reductase [Lipid transport	81.48
COG0002	349	ArgC Acetylglutamate semialdehyde dehydrogenase [A	81.3
PF00899	135	ThiF: ThiF family; InterPro: IPR000594 Ubiquitin-a	81.21
COG0287	279	TyrA Prephenate dehydrogenase [Amino acid transpor	81.19
PF02882	160	THF_DHG_CYH_C: Tetrahydrofolate dehydrogenase/cycl	81.01
TIGR00507	270	aroE shikimate 5-dehydrogenase. This model finds p	80.72
PRK06019	372	phosphoribosylaminoimidazole carboxylase ATPase su	80.63
cd01483	143	E1_enzyme_family Superfamily of activating enzymes	80.4
PRK00048	257	dihydrodipicolinate reductase; Provisional	80.36
PF01210	157	NAD_Gly3P_dh_N: NAD-dependent glycerol-3-phosphate	80.3
COG0665	387	DadA Glycine/D-amino acid oxidases (deaminating) [	80.3
PLN02520	529	bifunctional 3-dehydroquinate dehydratase/shikimat	80.26
PF00670	162	AdoHcyase_NAD: S-adenosyl-L-homocysteine hydrolase	80.25
PRK12549	284	shikimate 5-dehydrogenase; Reviewed	80.2

>KOG1430 consensus C-3 sterol dehydrogenase/3-beta-hydroxysteroid dehydrogenase and related dehydrogenases [Lipid transport and metabolism; Amino acid transport and metabolism]

Probab=100.00  E-value=4.8e-36  Score=282.08  Aligned_cols=243  Identities=37%  Similarity=0.593  Sum_probs=218.2

Q ss_pred             ccCCeEEEEcCCChhHHHHHHHHHHcC-CceEEEEecCCCCc-cccccc---CCCeEEEEcc------------------
Q 017760            9 IEGKTFLVTGGLGHVGSALCLELVRRG-AYQVRAFDLRTNSP-WSHLLI---NHGVHCIQGL------------------   65 (366)
Q Consensus         9 ~~~~~VlITGgtGfiG~~L~~~L~~~g-~~~V~~~dr~~~~~-~~~~~~---~~~v~~i~gD------------------   65 (366)
                      +++.+++||||+||+|++|++.|++++ ..+|+++|..+... ......   ...++++++|                  
T Consensus         2 ~~~~~vlVtGG~GflG~hlv~~L~~~~~~~~irv~D~~~~~~~~~~e~~~~~~~~v~~~~~D~~~~~~i~~a~~~~~Vvh   81 (361)
T KOG1430|consen    2 EKKLSVLVTGGSGFLGQHLVQALLENELKLEIRVVDKTPTQSNLPAELTGFRSGRVTVILGDLLDANSISNAFQGAVVVH   81 (361)
T ss_pred             CcCCEEEEECCccHHHHHHHHHHHhcccccEEEEeccCccccccchhhhcccCCceeEEecchhhhhhhhhhccCceEEE
Confidence            567899999999999999999999998 45899999998632 222222   5677888887                  


Q ss_pred             --------------------------------------------------------------------------------
Q 017760           66 --------------------------------------------------------------------------------   65 (366)
Q Consensus        66 --------------------------------------------------------------------------------   65 (366)
                                                                                                      
T Consensus        82 ~aa~~~~~~~~~~~~~~~~vNV~gT~nvi~~c~~~~v~~lIYtSs~~Vvf~g~~~~n~~E~~p~p~~~~d~Y~~sKa~aE  161 (361)
T KOG1430|consen   82 CAASPVPDFVENDRDLAMRVNVNGTLNVIEACKELGVKRLIYTSSAYVVFGGEPIINGDESLPYPLKHIDPYGESKALAE  161 (361)
T ss_pred             eccccCccccccchhhheeecchhHHHHHHHHHHhCCCEEEEecCceEEeCCeecccCCCCCCCccccccccchHHHHHH
Confidence                                                                                            


Q ss_pred             ----ccCCCCCceEEEEeCCccccCCCCCCHHHHHHHHHcCCCCeeecCCCcceeceeHHHHHHHHHHHHhccccCCCCC
Q 017760           66 ----RKNNRKCLYTCAVRPAAIYGPGEERHLPRIVSLAKLGLVPFKIGEPSVKTDWIYVDNLVLALILASMGLLDDIPGQ  141 (366)
Q Consensus        66 ----ks~~~~~l~~~ilRp~~iyGp~~~~~l~~~i~~~~~g~~~~~~g~~~~~~~~v~vdDla~a~~~a~~~l~~~~~~~  141 (366)
                          ++++..++.||+|||+.|||||++.+++.++..+++|..++..|+++.+.|++|++|++.||++|.++|.+.    
T Consensus       162 ~~Vl~an~~~~l~T~aLR~~~IYGpgd~~~~~~i~~~~~~g~~~f~~g~~~~~~~~~~~~Nva~ahilA~~aL~~~----  237 (361)
T KOG1430|consen  162 KLVLEANGSDDLYTCALRPPGIYGPGDKRLLPKIVEALKNGGFLFKIGDGENLNDFTYGENVAWAHILAARALLDK----  237 (361)
T ss_pred             HHHHHhcCCCCeeEEEEccccccCCCCccccHHHHHHHHccCceEEeeccccccceEEechhHHHHHHHHHHHHhc----
Confidence                224467899999999999999999999999999999999999999999999999999999999999999865    


Q ss_pred             CCCCCCCCccEEecCCCCCCHHHHHHHHHHhcCCCCC-ccccCHHHHHHHHHHHHHHHHhhhhccccccCCCCCCcHHhh
Q 017760          142 KGRPIASGQPYFVSDGFPINTFEFIGPLLKTLDYDLP-KSWLAVPHALFLGKVFSFFYSVLYPWLNRWWLPQPLILPAEV  220 (366)
Q Consensus       142 ~~~~~~~g~~y~I~~~~~vs~~e~~~~l~~~lg~~~~-~~~lp~~~~~~~a~~~e~~~~~~~~~~~~~~~~~p~l~~~ev  220 (366)
                        .+..+||.|||+|++|+..++++..+.+.+|+..+ .+.+|.++.+.++.+.|+++.+++|       .+|.+++.++
T Consensus       238 --~~~~~Gq~yfI~d~~p~~~~~~~~~l~~~lg~~~~~~~~~p~~l~~~~~~l~e~~~~~l~p-------~~p~lt~~~v  308 (361)
T KOG1430|consen  238 --SPSVNGQFYFITDDTPVRFFDFLSPLVKALGYCLPSSIKLPLFLSYFLAYLLEIVYFLLRP-------YQPILTRFRV  308 (361)
T ss_pred             --CCccCceEEEEeCCCcchhhHHHHHHHHhcCCCCCceeecchHHHHHHHHHHHHHHHhccC-------CCCCcChhhe
Confidence              78899999999999999999999999999999998 7889999999999999999999976       4799999999


Q ss_pred             hhhcccceecHHHHHHhcCCCCCCChHHHHHHHHHHHHhccccC
Q 017760          221 YKVGVTHYFSLLKAKDELCYVPIVSPREGMAATISYWQDRKRKS  264 (366)
Q Consensus       221 ~~~~~~~~~d~~ka~~~LG~~p~~~~~e~l~~~v~~~~~~~~~~  264 (366)
                      +....+++||++||+++|||+|.++++|++++++.|+.......
T Consensus       309 ~~~~~~~~f~~~kA~~~lgY~P~~~~~e~~~~~~~~~~~~~~~~  352 (361)
T KOG1430|consen  309 ALLGVTRTFSIEKAKRELGYKPLVSLEEAIQRTIHWVASESDSA  352 (361)
T ss_pred             eeeccccccCHHHHHHhhCCCCcCCHHHHHHHHHHHHhhhhhcc
Confidence            99999999999999999999999999999999999886655443

>COG1088 RfbB dTDP-D-glucose 4,6-dehydratase [Cell envelope biogenesis, outer membrane]

Probab=99.96  E-value=6.1e-28  Score=216.69  Aligned_cols=208  Identities=22%  Similarity=0.273  Sum_probs=166.1

Q ss_pred             CeEEEEcCCChhHHHHHHHHHHcCC-ceEEEEecCCCCccccc---c-cCCCeEEEEcc---------------------
Q 017760           12 KTFLVTGGLGHVGSALCLELVRRGA-YQVRAFDLRTNSPWSHL---L-INHGVHCIQGL---------------------   65 (366)
Q Consensus        12 ~~VlITGgtGfiG~~L~~~L~~~g~-~~V~~~dr~~~~~~~~~---~-~~~~v~~i~gD---------------------   65 (366)
                      |++|||||+||||++.+++++++.. .+|+.+|.-.-..+...   + ..+...|+++|                     
T Consensus         1 ~~iLVTGGaGFIGsnfvr~~~~~~~d~~v~~~DkLTYAgn~~~l~~~~~~~~~~fv~~DI~D~~~v~~~~~~~~~D~Vvh   80 (340)
T COG1088           1 MKILVTGGAGFIGSNFVRYILNKHPDDHVVNLDKLTYAGNLENLADVEDSPRYRFVQGDICDRELVDRLFKEYQPDAVVH   80 (340)
T ss_pred             CcEEEecCcchHHHHHHHHHHhcCCCceEEEEecccccCCHHHHHhhhcCCCceEEeccccCHHHHHHHHHhcCCCeEEE
Confidence            5799999999999999999999863 35888887653333222   2 23688999999                     


Q ss_pred             ---------------------------------------------------------------------------cc---
Q 017760           66 ---------------------------------------------------------------------------RK---   67 (366)
Q Consensus        66 ---------------------------------------------------------------------------ks---   67 (366)
                                                                                                 |+   
T Consensus        81 fAAESHVDRSI~~P~~Fi~TNv~GT~~LLEaar~~~~~frf~HISTDEVYG~l~~~~~~FtE~tp~~PsSPYSASKAasD  160 (340)
T COG1088          81 FAAESHVDRSIDGPAPFIQTNVVGTYTLLEAARKYWGKFRFHHISTDEVYGDLGLDDDAFTETTPYNPSSPYSASKAASD  160 (340)
T ss_pred             echhccccccccChhhhhhcchHHHHHHHHHHHHhcccceEEEeccccccccccCCCCCcccCCCCCCCCCcchhhhhHH
Confidence                                                                                       11   


Q ss_pred             ------CCCCCceEEEEeCCccccCCCC--CCHHHHHHHHHcCCCCeeecCCCcceeceeHHHHHHHHHHHHhccccCCC
Q 017760           68 ------NNRKCLYTCAVRPAAIYGPGEE--RHLPRIVSLAKLGLVPFKIGEPSVKTDWIYVDNLVLALILASMGLLDDIP  139 (366)
Q Consensus        68 ------~~~~~l~~~ilRp~~iyGp~~~--~~l~~~i~~~~~g~~~~~~g~~~~~~~~v~vdDla~a~~~a~~~l~~~~~  139 (366)
                            ...++++++|.|+++-|||...  .++|.++..+..|++++++|+|.+.+||+||+|=|+|+...+++      
T Consensus       161 ~lVray~~TYglp~~ItrcSNNYGPyqfpEKlIP~~I~nal~g~~lpvYGdG~~iRDWl~VeDh~~ai~~Vl~k------  234 (340)
T COG1088         161 LLVRAYVRTYGLPATITRCSNNYGPYQFPEKLIPLMIINALLGKPLPVYGDGLQIRDWLYVEDHCRAIDLVLTK------  234 (340)
T ss_pred             HHHHHHHHHcCCceEEecCCCCcCCCcCchhhhHHHHHHHHcCCCCceecCCcceeeeEEeHhHHHHHHHHHhc------
Confidence                  4567999999999999999863  57999999999999999999999999999999999999999963      


Q ss_pred             CCCCCCCCCCccEEecCCCCCCHHHHHHHHHHhcCCCCCccccCHHHHHHHHHHHHHHHHhhhhccccccCCCCCCcHHh
Q 017760          140 GQKGRPIASGQPYFVSDGFPINTFEFIGPLLKTLDYDLPKSWLAVPHALFLGKVFSFFYSVLYPWLNRWWLPQPLILPAE  219 (366)
Q Consensus       140 ~~~~~~~~~g~~y~I~~~~~vs~~e~~~~l~~~lg~~~~~~~lp~~~~~~~a~~~e~~~~~~~~~~~~~~~~~p~l~~~e  219 (366)
                            ...|++|||+++...++-|+++.|++.+|...+..+              .+...+    .    +.|.   ++
T Consensus       235 ------g~~GE~YNIgg~~E~~Nlevv~~i~~~l~~~~~~~~--------------~li~~V----~----DRpG---HD  283 (340)
T COG1088         235 ------GKIGETYNIGGGNERTNLEVVKTICELLGKDKPDYR--------------DLITFV----E----DRPG---HD  283 (340)
T ss_pred             ------CcCCceEEeCCCccchHHHHHHHHHHHhCccccchh--------------hheEec----c----CCCC---Cc
Confidence                  455999999999999999999999999998766300              000000    0    2221   11


Q ss_pred             hhhhcccceecHHHHHHhcCCCCCCChHHHHHHHHHHHHhcc
Q 017760          220 VYKVGVTHYFSLLKAKDELCYVPIVSPREGMAATISYWQDRK  261 (366)
Q Consensus       220 v~~~~~~~~~d~~ka~~~LG~~p~~~~~e~l~~~v~~~~~~~  261 (366)
                      .     ....|.+|++++|||.|+++++++|++|++||.++.
T Consensus       284 ~-----RYaid~~Ki~~eLgW~P~~~fe~GlrkTv~WY~~N~  320 (340)
T COG1088         284 R-----RYAIDASKIKRELGWRPQETFETGLRKTVDWYLDNE  320 (340)
T ss_pred             c-----ceeechHHHhhhcCCCcCCCHHHHHHHHHHHHHhch
Confidence            1     124689999999999999999999999999999876

>PRK15181 Vi polysaccharide biosynthesis protein TviC; Provisional

Probab=99.95  E-value=2.7e-27  Score=227.60  Aligned_cols=214  Identities=20%  Similarity=0.180  Sum_probs=158.2

Q ss_pred             cccCCeEEEEcCCChhHHHHHHHHHHcCCceEEEEecCCCCccc--cc-------ccCCCeEEEEcc-------------
Q 017760            8 GIEGKTFLVTGGLGHVGSALCLELVRRGAYQVRAFDLRTNSPWS--HL-------LINHGVHCIQGL-------------   65 (366)
Q Consensus         8 ~~~~~~VlITGgtGfiG~~L~~~L~~~g~~~V~~~dr~~~~~~~--~~-------~~~~~v~~i~gD-------------   65 (366)
                      .+++++|+|||||||+|++|+++|+++| ++|+++|+.......  ..       .....++++.+|             
T Consensus        12 ~~~~~~vlVtGatGfiG~~lv~~L~~~g-~~V~~~d~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~Di~d~~~l~~~~~~   90 (348)
T PRK15181         12 VLAPKRWLITGVAGFIGSGLLEELLFLN-QTVIGLDNFSTGYQHNLDDVRTSVSEEQWSRFIFIQGDIRKFTDCQKACKN   90 (348)
T ss_pred             cccCCEEEEECCccHHHHHHHHHHHHCC-CEEEEEeCCCCcchhhhhhhhhccccccCCceEEEEccCCCHHHHHHHhhC
Confidence            3567899999999999999999999999 499999986532110  00       001346777777             


Q ss_pred             --------------------------------------------------------------------------------
Q 017760           66 --------------------------------------------------------------------------------   65 (366)
Q Consensus        66 --------------------------------------------------------------------------------   65 (366)
                                                                                                      
T Consensus        91 ~d~ViHlAa~~~~~~~~~~~~~~~~~Nv~gt~nll~~~~~~~~~~~v~~SS~~vyg~~~~~~~~e~~~~~p~~~Y~~sK~  170 (348)
T PRK15181         91 VDYVLHQAALGSVPRSLKDPIATNSANIDGFLNMLTAARDAHVSSFTYAASSSTYGDHPDLPKIEERIGRPLSPYAVTKY  170 (348)
T ss_pred             CCEEEECccccCchhhhhCHHHHHHHHHHHHHHHHHHHHHcCCCeEEEeechHhhCCCCCCCCCCCCCCCCCChhhHHHH
Confidence                                                                                            


Q ss_pred             -------ccCCCCCceEEEEeCCccccCCCC------CCHHHHHHHHHcCCCCeeecCCCcceeceeHHHHHHHHHHHHh
Q 017760           66 -------RKNNRKCLYTCAVRPAAIYGPGEE------RHLPRIVSLAKLGLVPFKIGEPSVKTDWIYVDNLVLALILASM  132 (366)
Q Consensus        66 -------ks~~~~~l~~~ilRp~~iyGp~~~------~~l~~~i~~~~~g~~~~~~g~~~~~~~~v~vdDla~a~~~a~~  132 (366)
                             ......+++.+++||+++|||++.      .+++.++..+..|+.+.+.|++++.++|+||+|+|++++.+++
T Consensus       171 ~~e~~~~~~~~~~~~~~~~lR~~~vyGp~~~~~~~~~~~i~~~~~~~~~~~~i~~~g~g~~~rd~i~v~D~a~a~~~~~~  250 (348)
T PRK15181        171 VNELYADVFARSYEFNAIGLRYFNVFGRRQNPNGAYSAVIPRWILSLLKDEPIYINGDGSTSRDFCYIENVIQANLLSAT  250 (348)
T ss_pred             HHHHHHHHHHHHhCCCEEEEEecceeCcCCCCCCccccCHHHHHHHHHcCCCcEEeCCCCceEeeEEHHHHHHHHHHHHh
Confidence                   002234799999999999999863      3578888888888888888999999999999999999998775


Q ss_pred             ccccCCCCCCCCCCCCCccEEecCCCCCCHHHHHHHHHHhcCCCCCccccCHHHHHHHHHHHHHHHHhhhhccccccCCC
Q 017760          133 GLLDDIPGQKGRPIASGQPYFVSDGFPINTFEFIGPLLKTLDYDLPKSWLAVPHALFLGKVFSFFYSVLYPWLNRWWLPQ  212 (366)
Q Consensus       133 ~l~~~~~~~~~~~~~~g~~y~I~~~~~vs~~e~~~~l~~~lg~~~~~~~lp~~~~~~~a~~~e~~~~~~~~~~~~~~~~~  212 (366)
                      +         ......+++|||++++++|+.|+++.+.+.++.........                        .....
T Consensus       251 ~---------~~~~~~~~~yni~~g~~~s~~e~~~~i~~~~~~~~~~~~~~------------------------~~~~~  297 (348)
T PRK15181        251 T---------NDLASKNKVYNVAVGDRTSLNELYYLIRDGLNLWRNEQSRA------------------------EPIYK  297 (348)
T ss_pred             c---------ccccCCCCEEEecCCCcEeHHHHHHHHHHHhCcccccccCC------------------------CcccC
Confidence            2         01123578999999999999999999999987431100000                        00000


Q ss_pred             CCCcHHhhhhhcccceecHHHHHHhcCCCCCCChHHHHHHHHHHHHhc
Q 017760          213 PLILPAEVYKVGVTHYFSLLKAKDELCYVPIVSPREGMAATISYWQDR  260 (366)
Q Consensus       213 p~l~~~ev~~~~~~~~~d~~ka~~~LG~~p~~~~~e~l~~~v~~~~~~  260 (366)
                      + ..+.+.    ....+|++|+++++||.|+++++|+++++++|++.+
T Consensus       298 ~-~~~~~~----~~~~~d~~k~~~~lGw~P~~sl~egl~~~~~w~~~~  340 (348)
T PRK15181        298 D-FRDGDV----KHSQADITKIKTFLSYEPEFDIKEGLKQTLKWYIDK  340 (348)
T ss_pred             C-CCCCcc----cccccCHHHHHHHhCCCCCCCHHHHHHHHHHHHHHh
Confidence            1 111111    123579999999999999999999999999999765

>PF14934 DUF4499: Domain of unknown function (DUF4499)

Probab=99.94  E-value=3.7e-27  Score=178.67  Aligned_cols=85  Identities=34%  Similarity=0.498  Sum_probs=75.8

Q ss_pred             HHHHHHHHHHHHhhcCC--CCch-HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhhhc--CcCchhHHHHHH
Q 017760          275 FCLIGLPALFATAYLPD--IGPV-PILRTIGLFIFKSMWMMRLAFAIAVSAHVSEGVFAWCLAKKV--DPANAKGWFWQT  349 (366)
Q Consensus       275 ~~~i~l~~~~~~~~lp~--~g~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~h~~e~~~~~~~~~~~--~~~~~~~w~~~~  349 (366)
                      .+.+.+++++++.++|+  +||+ +|++++.   ++++.++|++|++||++|++||+||++||++.  |++|+.+||+||
T Consensus         2 ~~~~~~~~vf~p~~~P~~~lgplg~f~~~~~---~~~~~~~~~~~~~a~~iHv~Ea~yA~~Lc~~~gi~~~~~~~W~~qT   78 (91)
T PF14934_consen    2 GLGYFMWVVFWPASIPYQSLGPLGSFVQYLV---FRSPFLLRLGFWFAWLIHVGEALYAFYLCRKKGISFSNRLLWFLQT   78 (91)
T ss_pred             chHHHHHHHHhcccCCHHHcCcHHHHHHHHH---HhhHHHHHHHHHHHHHHHHHHHHHHHHHHHHcCCCHhHHHHHHHHH
Confidence            35678899999999999  9999 7755554   44555599999999999999999999999996  999999999999


Q ss_pred             HHHhHhhHHHHHh
Q 017760          350 LALGVFSLRLLLK  362 (366)
Q Consensus       350 ~~~g~~s~~~~~~  362 (366)
                      |+|||+||++|+|
T Consensus        79 fl~G~~SL~~LlK   91 (91)
T PF14934_consen   79 FLFGFPSLSLLLK   91 (91)
T ss_pred             HHhHHHHHHHHhC
Confidence            9999999999987

>KOG1429 consensus dTDP-glucose 4-6-dehydratase/UDP-glucuronic acid decarboxylase [Carbohydrate transport and metabolism; Cell wall/membrane/envelope biogenesis]

Probab=99.94  E-value=2e-25  Score=198.86  Aligned_cols=207  Identities=21%  Similarity=0.274  Sum_probs=164.7

Q ss_pred             ccCCeEEEEcCCChhHHHHHHHHHHcCCceEEEEecCCCCccc---ccccCCCeEEEEcc--------------------
Q 017760            9 IEGKTFLVTGGLGHVGSALCLELVRRGAYQVRAFDLRTNSPWS---HLLINHGVHCIQGL--------------------   65 (366)
Q Consensus         9 ~~~~~VlITGgtGfiG~~L~~~L~~~g~~~V~~~dr~~~~~~~---~~~~~~~v~~i~gD--------------------   65 (366)
                      ...++|+||||+||||++||+.|...| |+|+++|........   .....+.++.+..|                    
T Consensus        25 ~~~lrI~itGgaGFIgSHLvdkLm~eg-h~VIa~Dn~ftg~k~n~~~~~~~~~fel~~hdv~~pl~~evD~IyhLAapas  103 (350)
T KOG1429|consen   25 SQNLRILITGGAGFIGSHLVDKLMTEG-HEVIALDNYFTGRKENLEHWIGHPNFELIRHDVVEPLLKEVDQIYHLAAPAS  103 (350)
T ss_pred             CCCcEEEEecCcchHHHHHHHHHHhcC-CeEEEEecccccchhhcchhccCcceeEEEeechhHHHHHhhhhhhhccCCC
Confidence            345899999999999999999999999 899999987654332   22234566666666                    


Q ss_pred             -------------------------------------------------------------------------------c
Q 017760           66 -------------------------------------------------------------------------------R   66 (366)
Q Consensus        66 -------------------------------------------------------------------------------k   66 (366)
                                                                                                     .
T Consensus       104 p~~y~~npvktIktN~igtln~lglakrv~aR~l~aSTseVYgdp~~hpq~e~ywg~vnpigpr~cydegKr~aE~L~~~  183 (350)
T KOG1429|consen  104 PPHYKYNPVKTIKTNVIGTLNMLGLAKRVGARFLLASTSEVYGDPLVHPQVETYWGNVNPIGPRSCYDEGKRVAETLCYA  183 (350)
T ss_pred             CcccccCccceeeecchhhHHHHHHHHHhCceEEEeecccccCCcccCCCccccccccCcCCchhhhhHHHHHHHHHHHH
Confidence                                                                                           2


Q ss_pred             cCCCCCceEEEEeCCccccCCC----CCCHHHHHHHHHcCCCCeeecCCCcceeceeHHHHHHHHHHHHhccccCCCCCC
Q 017760           67 KNNRKCLYTCAVRPAAIYGPGE----ERHLPRIVSLAKLGLVPFKIGEPSVKTDWIYVDNLVLALILASMGLLDDIPGQK  142 (366)
Q Consensus        67 s~~~~~l~~~ilRp~~iyGp~~----~~~l~~~i~~~~~g~~~~~~g~~~~~~~~v~vdDla~a~~~a~~~l~~~~~~~~  142 (366)
                      ..++.++.+.|.|+.++|||+.    .+.+..++.++.++.++.++|+|.+.++|.||+|++++++++++.         
T Consensus       184 y~k~~giE~rIaRifNtyGPrm~~~dgrvvsnf~~q~lr~epltv~g~G~qtRSF~yvsD~Vegll~Lm~s---------  254 (350)
T KOG1429|consen  184 YHKQEGIEVRIARIFNTYGPRMHMDDGRVVSNFIAQALRGEPLTVYGDGKQTRSFQYVSDLVEGLLRLMES---------  254 (350)
T ss_pred             hhcccCcEEEEEeeecccCCccccCCChhhHHHHHHHhcCCCeEEEcCCcceEEEEeHHHHHHHHHHHhcC---------
Confidence            2677899999999999999974    577888999999999999999999999999999999999999972         


Q ss_pred             CCCCCCCccEEecCCCCCCHHHHHHHHHHhcCCCCCccccCHHHHHHHHHHHHHHHHhhhhccccccCCCCCCcHHhhhh
Q 017760          143 GRPIASGQPYFVSDGFPINTFEFIGPLLKTLDYDLPKSWLAVPHALFLGKVFSFFYSVLYPWLNRWWLPQPLILPAEVYK  222 (366)
Q Consensus       143 ~~~~~~g~~y~I~~~~~vs~~e~~~~l~~~lg~~~~~~~lp~~~~~~~a~~~e~~~~~~~~~~~~~~~~~p~l~~~ev~~  222 (366)
                        +  -.+.+||++++.+|+.|+++.+.+..+-...+...+                           ..+    ++.. 
T Consensus       255 --~--~~~pvNiGnp~e~Tm~elAemv~~~~~~~s~i~~~~---------------------------~~~----Ddp~-  298 (350)
T KOG1429|consen  255 --D--YRGPVNIGNPGEFTMLELAEMVKELIGPVSEIEFVE---------------------------NGP----DDPR-  298 (350)
T ss_pred             --C--CcCCcccCCccceeHHHHHHHHHHHcCCCcceeecC---------------------------CCC----CCcc-
Confidence              2  223599999999999999999999996443322111                           111    1111 


Q ss_pred             hcccceecHHHHHHhcCCCCCCChHHHHHHHHHHHHhccccC
Q 017760          223 VGVTHYFSLLKAKDELCYVPIVSPREGMAATISYWQDRKRKS  264 (366)
Q Consensus       223 ~~~~~~~d~~ka~~~LG~~p~~~~~e~l~~~v~~~~~~~~~~  264 (366)
                         ...-|++++++.|||+|+++++|+|+.|+.|++++-.+.
T Consensus       299 ---kR~pDit~ake~LgW~Pkv~L~egL~~t~~~fr~~i~~~  337 (350)
T KOG1429|consen  299 ---KRKPDITKAKEQLGWEPKVSLREGLPLTVTYFRERIARE  337 (350)
T ss_pred             ---ccCccHHHHHHHhCCCCCCcHHHhhHHHHHHHHHHHHHH
Confidence               124699999999999999999999999999998865544

>PLN02206 UDP-glucuronate decarboxylase

Probab=99.94  E-value=1.9e-25  Score=220.38  Aligned_cols=145  Identities=19%  Similarity=0.200  Sum_probs=115.5

Q ss_pred             CCceEEEEeCCccccCCC----CCCHHHHHHHHHcCCCCeeecCCCcceeceeHHHHHHHHHHHHhccccCCCCCCCCCC
Q 017760           71 KCLYTCAVRPAAIYGPGE----ERHLPRIVSLAKLGLVPFKIGEPSVKTDWIYVDNLVLALILASMGLLDDIPGQKGRPI  146 (366)
Q Consensus        71 ~~l~~~ilRp~~iyGp~~----~~~l~~~i~~~~~g~~~~~~g~~~~~~~~v~vdDla~a~~~a~~~l~~~~~~~~~~~~  146 (366)
                      .+++++++||+++|||+.    .+.++.++..+..++.+.++|++++.++|+||+|+|++++.++++           . 
T Consensus       280 ~g~~~~ilR~~~vyGp~~~~~~~~~v~~~i~~~l~~~~i~i~g~G~~~rdfi~V~Dva~ai~~a~e~-----------~-  347 (442)
T PLN02206        280 ANVEVRIARIFNTYGPRMCIDDGRVVSNFVAQALRKEPLTVYGDGKQTRSFQFVSDLVEGLMRLMEG-----------E-  347 (442)
T ss_pred             hCCCeEEEEeccccCCCCCccccchHHHHHHHHHcCCCcEEeCCCCEEEeEEeHHHHHHHHHHHHhc-----------C-
Confidence            468899999999999984    355778888888888878889999999999999999999999862           2 


Q ss_pred             CCCccEEecCCCCCCHHHHHHHHHHhcCCCCCccccCHHHHHHHHHHHHHHHHhhhhccccccCCCCCCcHHhhhhhccc
Q 017760          147 ASGQPYFVSDGFPINTFEFIGPLLKTLDYDLPKSWLAVPHALFLGKVFSFFYSVLYPWLNRWWLPQPLILPAEVYKVGVT  226 (366)
Q Consensus       147 ~~g~~y~I~~~~~vs~~e~~~~l~~~lg~~~~~~~lp~~~~~~~a~~~e~~~~~~~~~~~~~~~~~p~l~~~ev~~~~~~  226 (366)
                       .++.|||++++++|+.|+++.+++.+|.+......|                            ...   .+    ...
T Consensus       348 -~~g~yNIgs~~~~sl~Elae~i~~~~g~~~~i~~~p----------------------------~~~---~~----~~~  391 (442)
T PLN02206        348 -HVGPFNLGNPGEFTMLELAKVVQETIDPNAKIEFRP----------------------------NTE---DD----PHK  391 (442)
T ss_pred             -CCceEEEcCCCceeHHHHHHHHHHHhCCCCceeeCC----------------------------CCC---CC----ccc
Confidence             245899999999999999999999998654322111                            110   01    012


Q ss_pred             ceecHHHHHHhcCCCCCCChHHHHHHHHHHHHhcccc
Q 017760          227 HYFSLLKAKDELCYVPIVSPREGMAATISYWQDRKRK  263 (366)
Q Consensus       227 ~~~d~~ka~~~LG~~p~~~~~e~l~~~v~~~~~~~~~  263 (366)
                      ...|++|+++++||+|+++++|+|+++++||++.-..
T Consensus       392 ~~~d~sKa~~~LGw~P~~~l~egl~~~~~~~~~~~~~  428 (442)
T PLN02206        392 RKPDITKAKELLGWEPKVSLRQGLPLMVKDFRQRVFG  428 (442)
T ss_pred             cccCHHHHHHHcCCCCCCCHHHHHHHHHHHHHHhhhc
Confidence            2579999999999999999999999999999775433

>PLN02166 dTDP-glucose 4,6-dehydratase

Probab=99.94  E-value=2.5e-25  Score=219.21  Aligned_cols=146  Identities=20%  Similarity=0.244  Sum_probs=117.3

Q ss_pred             CCceEEEEeCCccccCCC----CCCHHHHHHHHHcCCCCeeecCCCcceeceeHHHHHHHHHHHHhccccCCCCCCCCCC
Q 017760           71 KCLYTCAVRPAAIYGPGE----ERHLPRIVSLAKLGLVPFKIGEPSVKTDWIYVDNLVLALILASMGLLDDIPGQKGRPI  146 (366)
Q Consensus        71 ~~l~~~ilRp~~iyGp~~----~~~l~~~i~~~~~g~~~~~~g~~~~~~~~v~vdDla~a~~~a~~~l~~~~~~~~~~~~  146 (366)
                      .+++++++||+++|||++    .+.++.++..+.++..+.++|++++.++|+||+|+|+++..+++.           . 
T Consensus       281 ~~l~~~ilR~~~vYGp~~~~~~~~~i~~~i~~~l~~~~i~v~g~g~~~rdfi~V~Dva~ai~~~~~~-----------~-  348 (436)
T PLN02166        281 AGVEVRIARIFNTYGPRMCLDDGRVVSNFVAQTIRKQPMTVYGDGKQTRSFQYVSDLVDGLVALMEG-----------E-  348 (436)
T ss_pred             hCCCeEEEEEccccCCCCCCCccchHHHHHHHHhcCCCcEEeCCCCeEEeeEEHHHHHHHHHHHHhc-----------C-
Confidence            368899999999999985    356778888888888888889999999999999999999998862           1 


Q ss_pred             CCCccEEecCCCCCCHHHHHHHHHHhcCCCCCccccCHHHHHHHHHHHHHHHHhhhhccccccCCCCCCcHHhhhhhccc
Q 017760          147 ASGQPYFVSDGFPINTFEFIGPLLKTLDYDLPKSWLAVPHALFLGKVFSFFYSVLYPWLNRWWLPQPLILPAEVYKVGVT  226 (366)
Q Consensus       147 ~~g~~y~I~~~~~vs~~e~~~~l~~~lg~~~~~~~lp~~~~~~~a~~~e~~~~~~~~~~~~~~~~~p~l~~~ev~~~~~~  226 (366)
                       .+++|||++++++|+.|+++.+.+.+|.+.+....                            +.+   ..+.    ..
T Consensus       349 -~~giyNIgs~~~~Si~ela~~I~~~~g~~~~i~~~----------------------------p~~---~~~~----~~  392 (436)
T PLN02166        349 -HVGPFNLGNPGEFTMLELAEVVKETIDSSATIEFK----------------------------PNT---ADDP----HK  392 (436)
T ss_pred             -CCceEEeCCCCcEeHHHHHHHHHHHhCCCCCeeeC----------------------------CCC---CCCc----cc
Confidence             24599999999999999999999999876432211                            110   1111    12


Q ss_pred             ceecHHHHHHhcCCCCCCChHHHHHHHHHHHHhccccC
Q 017760          227 HYFSLLKAKDELCYVPIVSPREGMAATISYWQDRKRKS  264 (366)
Q Consensus       227 ~~~d~~ka~~~LG~~p~~~~~e~l~~~v~~~~~~~~~~  264 (366)
                      ...|++|++++|||+|+++++++|+++++||+++-.+.
T Consensus       393 ~~~d~~Ka~~~LGw~P~~sl~egl~~~i~~~~~~~~~~  430 (436)
T PLN02166        393 RKPDISKAKELLNWEPKISLREGLPLMVSDFRNRILNE  430 (436)
T ss_pred             cccCHHHHHHHcCCCCCCCHHHHHHHHHHHHHHHhcCc
Confidence            25799999999999999999999999999998765554

>TIGR03466 HpnA hopanoid-associated sugar epimerase

Probab=99.93  E-value=2.1e-24  Score=205.08  Aligned_cols=222  Identities=23%  Similarity=0.242  Sum_probs=168.8

Q ss_pred             CeEEEEcCCChhHHHHHHHHHHcCCceEEEEecCCCCcccccccCCCeEEEEcc--------------------------
Q 017760           12 KTFLVTGGLGHVGSALCLELVRRGAYQVRAFDLRTNSPWSHLLINHGVHCIQGL--------------------------   65 (366)
Q Consensus        12 ~~VlITGgtGfiG~~L~~~L~~~g~~~V~~~dr~~~~~~~~~~~~~~v~~i~gD--------------------------   65 (366)
                      |+|+||||+||+|+++++.|+++| ++|++++|++....  .....+++.+++|                          
T Consensus         1 ~~vlItG~~G~iG~~l~~~L~~~g-~~V~~~~r~~~~~~--~~~~~~~~~~~~D~~~~~~l~~~~~~~d~vi~~a~~~~~   77 (328)
T TIGR03466         1 MKVLVTGATGFVGSAVVRLLLEQG-EEVRVLVRPTSDRR--NLEGLDVEIVEGDLRDPASLRKAVAGCRALFHVAADYRL   77 (328)
T ss_pred             CeEEEECCccchhHHHHHHHHHCC-CEEEEEEecCcccc--ccccCCceEEEeeCCCHHHHHHHHhCCCEEEEeceeccc
Confidence            479999999999999999999999 59999999754321  1122245555555                          


Q ss_pred             ----------------------------------------c--c----------------------------------CC
Q 017760           66 ----------------------------------------R--K----------------------------------NN   69 (366)
Q Consensus        66 ----------------------------------------k--s----------------------------------~~   69 (366)
                                                              .  .                                  ..
T Consensus        78 ~~~~~~~~~~~n~~~~~~l~~~~~~~~~~~~v~~SS~~~~~~~~~~~~~~e~~~~~~~~~~~~Y~~sK~~~e~~~~~~~~  157 (328)
T TIGR03466        78 WAPDPEEMYAANVEGTRNLLRAALEAGVERVVYTSSVATLGVRGDGTPADETTPSSLDDMIGHYKRSKFLAEQAALEMAA  157 (328)
T ss_pred             CCCCHHHHHHHHHHHHHHHHHHHHHhCCCeEEEEechhhcCcCCCCCCcCccCCCCcccccChHHHHHHHHHHHHHHHHH
Confidence                                                    0  0                                  01


Q ss_pred             CCCceEEEEeCCccccCCCCCC--HHHHHHHHHcCCCCeeecCCCcceeceeHHHHHHHHHHHHhccccCCCCCCCCCCC
Q 017760           70 RKCLYTCAVRPAAIYGPGEERH--LPRIVSLAKLGLVPFKIGEPSVKTDWIYVDNLVLALILASMGLLDDIPGQKGRPIA  147 (366)
Q Consensus        70 ~~~l~~~ilRp~~iyGp~~~~~--l~~~i~~~~~g~~~~~~g~~~~~~~~v~vdDla~a~~~a~~~l~~~~~~~~~~~~~  147 (366)
                      ..+++++++||+.+|||++...  ...++.....+......+   ...+|+|++|+|++++.+++           . ..
T Consensus       158 ~~~~~~~ilR~~~~~G~~~~~~~~~~~~~~~~~~~~~~~~~~---~~~~~i~v~D~a~a~~~~~~-----------~-~~  222 (328)
T TIGR03466       158 EKGLPVVIVNPSTPIGPRDIKPTPTGRIIVDFLNGKMPAYVD---TGLNLVHVDDVAEGHLLALE-----------R-GR  222 (328)
T ss_pred             hcCCCEEEEeCCccCCCCCCCCCcHHHHHHHHHcCCCceeeC---CCcceEEHHHHHHHHHHHHh-----------C-CC
Confidence            1367899999999999987532  334444444444333222   34689999999999999996           2 23


Q ss_pred             CCccEEecCCCCCCHHHHHHHHHHhcCCCCCccccCHHHHHHHHHHHHHHHHhhhhccccccCCCCCCcHHhhhhhcccc
Q 017760          148 SGQPYFVSDGFPINTFEFIGPLLKTLDYDLPKSWLAVPHALFLGKVFSFFYSVLYPWLNRWWLPQPLILPAEVYKVGVTH  227 (366)
Q Consensus       148 ~g~~y~I~~~~~vs~~e~~~~l~~~lg~~~~~~~lp~~~~~~~a~~~e~~~~~~~~~~~~~~~~~p~l~~~ev~~~~~~~  227 (366)
                      .++.|+++ ++++|+.|+++.+.+.+|.+.+...+|.+....++.+.+.+..+.+        ..|.++...+.....+.
T Consensus       223 ~~~~~~~~-~~~~s~~e~~~~i~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~--------~~~~~~~~~~~~~~~~~  293 (328)
T TIGR03466       223 IGERYILG-GENLTLKQILDKLAEITGRPAPRVKLPRWLLLPVAWGAEALARLTG--------KEPRVTVDGVRMAKKKM  293 (328)
T ss_pred             CCceEEec-CCCcCHHHHHHHHHHHhCCCCCCCcCCHHHHHHHHHHHHHHHHhcC--------CCCCCCHHHHHHHhccC
Confidence            56778875 6889999999999999999888888999999999998888877654        44555666666666667


Q ss_pred             eecHHHHHHhcCCCCCCChHHHHHHHHHHHHhcc
Q 017760          228 YFSLLKAKDELCYVPIVSPREGMAATISYWQDRK  261 (366)
Q Consensus       228 ~~d~~ka~~~LG~~p~~~~~e~l~~~v~~~~~~~  261 (366)
                      .+|++|++++|||+|. +++++|+++++||++++
T Consensus       294 ~~d~~k~~~~lg~~p~-~~~~~i~~~~~~~~~~~  326 (328)
T TIGR03466       294 FFSSAKAVRELGYRQR-PAREALRDAVEWFRANG  326 (328)
T ss_pred             CCChHHHHHHcCCCCc-CHHHHHHHHHHHHHHhC
Confidence            8999999999999996 99999999999998764

The sequences in this family are members of the pfam01370 superfamily of NAD-dependent epimerases and dehydratases typically acting on nucleotide-sugar substrates. The genes of the family modeled here are generally in the same locus with genes involved in the biosynthesis and elaboration of hopene, the cyclization product of the polyisoprenoid squalene.

>PLN00016 RNA-binding protein; Provisional

Probab=99.93  E-value=4.7e-25  Score=214.41  Aligned_cols=221  Identities=21%  Similarity=0.227  Sum_probs=163.3

Q ss_pred             cCCeEEEE----cCCChhHHHHHHHHHHcCCceEEEEecCCCCccc---------ccccCCCeEEEEcc-----------
Q 017760           10 EGKTFLVT----GGLGHVGSALCLELVRRGAYQVRAFDLRTNSPWS---------HLLINHGVHCIQGL-----------   65 (366)
Q Consensus        10 ~~~~VlIT----GgtGfiG~~L~~~L~~~g~~~V~~~dr~~~~~~~---------~~~~~~~v~~i~gD-----------   65 (366)
                      ++++|+||    |||||+|++|++.|++.| |+|++++|+......         ..+...+++++++|           
T Consensus        51 ~~~~VLVt~~~~GatG~iG~~lv~~L~~~G-~~V~~l~R~~~~~~~~~~~~~~~~~~l~~~~v~~v~~D~~d~~~~~~~~  129 (378)
T PLN00016         51 EKKKVLIVNTNSGGHAFIGFYLAKELVKAG-HEVTLFTRGKEPSQKMKKEPFSRFSELSSAGVKTVWGDPADVKSKVAGA  129 (378)
T ss_pred             ccceEEEEeccCCCceeEhHHHHHHHHHCC-CEEEEEecCCcchhhhccCchhhhhHhhhcCceEEEecHHHHHhhhccC
Confidence            35789999    999999999999999999 699999998643110         01112346666666           


Q ss_pred             -----------------------------------------c----------------c-------CCCCCceEEEEeCC
Q 017760           66 -----------------------------------------R----------------K-------NNRKCLYTCAVRPA   81 (366)
Q Consensus        66 -----------------------------------------k----------------s-------~~~~~l~~~ilRp~   81 (366)
                                                               .                +       ....+++++++||+
T Consensus       130 ~~d~Vi~~~~~~~~~~~~ll~aa~~~gvkr~V~~SS~~vyg~~~~~p~~E~~~~~p~~sK~~~E~~l~~~~l~~~ilRp~  209 (378)
T PLN00016        130 GFDVVYDNNGKDLDEVEPVADWAKSPGLKQFLFCSSAGVYKKSDEPPHVEGDAVKPKAGHLEVEAYLQKLGVNWTSFRPQ  209 (378)
T ss_pred             CccEEEeCCCCCHHHHHHHHHHHHHcCCCEEEEEccHhhcCCCCCCCCCCCCcCCCcchHHHHHHHHHHcCCCeEEEece
Confidence                                                     0                0       11236789999999


Q ss_pred             ccccCCCCC-CHHHHHHHHHcCCCCeeecCCCcceeceeHHHHHHHHHHHHhccccCCCCCCCCCCCCCccEEecCCCCC
Q 017760           82 AIYGPGEER-HLPRIVSLAKLGLVPFKIGEPSVKTDWIYVDNLVLALILASMGLLDDIPGQKGRPIASGQPYFVSDGFPI  160 (366)
Q Consensus        82 ~iyGp~~~~-~l~~~i~~~~~g~~~~~~g~~~~~~~~v~vdDla~a~~~a~~~l~~~~~~~~~~~~~~g~~y~I~~~~~v  160 (366)
                      ++|||+... ....++..+..+..+.++|++++.++|+|++|+|+++..+++           .+...+++||+++++++
T Consensus       210 ~vyG~~~~~~~~~~~~~~~~~~~~i~~~g~g~~~~~~i~v~Dva~ai~~~l~-----------~~~~~~~~yni~~~~~~  278 (378)
T PLN00016        210 YIYGPGNNKDCEEWFFDRLVRGRPVPIPGSGIQLTQLGHVKDLASMFALVVG-----------NPKAAGQIFNIVSDRAV  278 (378)
T ss_pred             eEECCCCCCchHHHHHHHHHcCCceeecCCCCeeeceecHHHHHHHHHHHhc-----------CccccCCEEEecCCCcc
Confidence            999998653 345677778888877777888999999999999999999996           44455789999999999


Q ss_pred             CHHHHHHHHHHhcCCCCCccccCHHHHHHHHHHHHHHHHhhhhccccccCCCCCCcHHhhhhhcccceecHHHHHHhcCC
Q 017760          161 NTFEFIGPLLKTLDYDLPKSWLAVPHALFLGKVFSFFYSVLYPWLNRWWLPQPLILPAEVYKVGVTHYFSLLKAKDELCY  240 (366)
Q Consensus       161 s~~e~~~~l~~~lg~~~~~~~lp~~~~~~~a~~~e~~~~~~~~~~~~~~~~~p~l~~~ev~~~~~~~~~d~~ka~~~LG~  240 (366)
                      |+.|+++.+.+.+|.+.+....+....       +.    .         .... .+.    .....+.|++|++++|||
T Consensus       279 s~~el~~~i~~~~g~~~~i~~~~~~~~-------~~----~---------~~~~-~p~----~~~~~~~d~~ka~~~LGw  333 (378)
T PLN00016        279 TFDGMAKACAKAAGFPEEIVHYDPKAV-------GF----G---------AKKA-FPF----RDQHFFASPRKAKEELGW  333 (378)
T ss_pred             CHHHHHHHHHHHhCCCCceeecCcccc-------Cc----c---------cccc-ccc----cccccccCHHHHHHhcCC
Confidence            999999999999998754332221100       00    0         0000 000    011224699999999999


Q ss_pred             CCCCChHHHHHHHHHHHHhccccCCCC
Q 017760          241 VPIVSPREGMAATISYWQDRKRKSLDG  267 (366)
Q Consensus       241 ~p~~~~~e~l~~~v~~~~~~~~~~~~~  267 (366)
                      +|+++++|+|+++++||+++++.+++.
T Consensus       334 ~p~~~l~egl~~~~~~~~~~~~~~~~~  360 (378)
T PLN00016        334 TPKFDLVEDLKDRYELYFGRGRDRKEA  360 (378)
T ss_pred             CCCCCHHHHHHHHHHHHHhcCCCcccc
Confidence            999999999999999999888776543

>COG1087 GalE UDP-glucose 4-epimerase [Cell envelope biogenesis, outer membrane]

Probab=99.93  E-value=7.1e-25  Score=197.89  Aligned_cols=202  Identities=22%  Similarity=0.228  Sum_probs=157.4

Q ss_pred             CeEEEEcCCChhHHHHHHHHHHcCCceEEEEecCCCCcccccccCCCeEEEEcc--------------------------
Q 017760           12 KTFLVTGGLGHVGSALCLELVRRGAYQVRAFDLRTNSPWSHLLINHGVHCIQGL--------------------------   65 (366)
Q Consensus        12 ~~VlITGgtGfiG~~L~~~L~~~g~~~V~~~dr~~~~~~~~~~~~~~v~~i~gD--------------------------   65 (366)
                      |+||||||+||||++.+.+|++.| ++|+++|.-..... ..+....+++++||                          
T Consensus         1 ~~iLVtGGAGYIGSHtv~~Ll~~G-~~vvV~DNL~~g~~-~~v~~~~~~f~~gDi~D~~~L~~vf~~~~idaViHFAa~~   78 (329)
T COG1087           1 MKVLVTGGAGYIGSHTVRQLLKTG-HEVVVLDNLSNGHK-IALLKLQFKFYEGDLLDRALLTAVFEENKIDAVVHFAASI   78 (329)
T ss_pred             CeEEEecCcchhHHHHHHHHHHCC-CeEEEEecCCCCCH-HHhhhccCceEEeccccHHHHHHHHHhcCCCEEEECcccc
Confidence            589999999999999999999999 59999998765432 22322237899999                          


Q ss_pred             ----------------------------------------------------------------------------ccCC
Q 017760           66 ----------------------------------------------------------------------------RKNN   69 (366)
Q Consensus        66 ----------------------------------------------------------------------------ks~~   69 (366)
                                                                                                  ....
T Consensus        79 ~VgESv~~Pl~Yy~NNv~gTl~Ll~am~~~gv~~~vFSStAavYG~p~~~PI~E~~~~~p~NPYG~sKlm~E~iL~d~~~  158 (329)
T COG1087          79 SVGESVQNPLKYYDNNVVGTLNLIEAMLQTGVKKFIFSSTAAVYGEPTTSPISETSPLAPINPYGRSKLMSEEILRDAAK  158 (329)
T ss_pred             ccchhhhCHHHHHhhchHhHHHHHHHHHHhCCCEEEEecchhhcCCCCCcccCCCCCCCCCCcchhHHHHHHHHHHHHHH
Confidence                                                                                        1145


Q ss_pred             CCCceEEEEeCCccccCCC-----------CCCHHHHHHHHHcCC-CCeeec------CCCcceeceeHHHHHHHHHHHH
Q 017760           70 RKCLYTCAVRPAAIYGPGE-----------ERHLPRIVSLAKLGL-VPFKIG------EPSVKTDWIYVDNLVLALILAS  131 (366)
Q Consensus        70 ~~~l~~~ilRp~~iyGp~~-----------~~~l~~~i~~~~~g~-~~~~~g------~~~~~~~~v~vdDla~a~~~a~  131 (366)
                      ..++++++||..++-|...           .+.+|.+++.+...+ .+.++|      ||+..+|||||.|+|+||++|+
T Consensus       159 a~~~~~v~LRYFN~aGA~~~G~iGe~~~~~thLip~~~q~A~G~r~~l~ifG~DY~T~DGT~iRDYIHV~DLA~aH~~Al  238 (329)
T COG1087         159 ANPFKVVILRYFNVAGACPDGTLGQRYPGATLLIPVAAEAALGKRDKLFIFGDDYDTKDGTCIRDYIHVDDLADAHVLAL  238 (329)
T ss_pred             hCCCcEEEEEecccccCCCCCccCCCCCCcchHHHHHHHHHhcCCceeEEeCCCCCCCCCCeeeeeeehhHHHHHHHHHH
Confidence            5679999999999999753           245677777655433 356676      6789999999999999999999


Q ss_pred             hccccCCCCCCCCCCCCCccEEecCCCCCCHHHHHHHHHHhcCCCCCccccCHHHHHHHHHHHHHHHHhhhhccccccCC
Q 017760          132 MGLLDDIPGQKGRPIASGQPYFVSDGFPINTFEFIGPLLKTLDYDLPKSWLAVPHALFLGKVFSFFYSVLYPWLNRWWLP  211 (366)
Q Consensus       132 ~~l~~~~~~~~~~~~~~g~~y~I~~~~~vs~~e~~~~l~~~lg~~~~~~~lp~~~~~~~a~~~e~~~~~~~~~~~~~~~~  211 (366)
                      +.|.+.         ...++||++.|.-.|+.|+++.+.+..|.+.|....                            +
T Consensus       239 ~~L~~~---------g~~~~~NLG~G~G~SV~evi~a~~~vtg~~ip~~~~----------------------------~  281 (329)
T COG1087         239 KYLKEG---------GSNNIFNLGSGNGFSVLEVIEAAKKVTGRDIPVEIA----------------------------P  281 (329)
T ss_pred             HHHHhC---------CceeEEEccCCCceeHHHHHHHHHHHhCCcCceeeC----------------------------C
Confidence            987543         222699999999999999999999999988764322                            1


Q ss_pred             CCCCcHHhhhhhcccceecHHHHHHhcCCCCCC-ChHHHHHHHHHHHHh
Q 017760          212 QPLILPAEVYKVGVTHYFSLLKAKDELCYVPIV-SPREGMAATISYWQD  259 (366)
Q Consensus       212 ~p~l~~~ev~~~~~~~~~d~~ka~~~LG~~p~~-~~~e~l~~~v~~~~~  259 (366)
                      ++.=.|..       .+-|.+||+++|||+|++ ++++.++++..|.+.
T Consensus       282 RR~GDpa~-------l~Ad~~kA~~~Lgw~p~~~~L~~ii~~aw~W~~~  323 (329)
T COG1087         282 RRAGDPAI-------LVADSSKARQILGWQPTYDDLEDIIKDAWDWHQQ  323 (329)
T ss_pred             CCCCCCce-------eEeCHHHHHHHhCCCcccCCHHHHHHHHHHHhhh
Confidence            11111111       157999999999999999 999999999999973

>PRK10217 dTDP-glucose 4,6-dehydratase; Provisional

Probab=99.93  E-value=6.1e-25  Score=211.62  Aligned_cols=157  Identities=18%  Similarity=0.231  Sum_probs=117.3

Q ss_pred             CCceEEEEeCCccccCCCC--CCHHHHHHHHHcCCCCeeecCCCcceeceeHHHHHHHHHHHHhccccCCCCCCCCCCCC
Q 017760           71 KCLYTCAVRPAAIYGPGEE--RHLPRIVSLAKLGLVPFKIGEPSVKTDWIYVDNLVLALILASMGLLDDIPGQKGRPIAS  148 (366)
Q Consensus        71 ~~l~~~ilRp~~iyGp~~~--~~l~~~i~~~~~g~~~~~~g~~~~~~~~v~vdDla~a~~~a~~~l~~~~~~~~~~~~~~  148 (366)
                      .+++++++||+++|||++.  ..++.++..+.+|..+.++|++++.++|+||+|+|+++..+++           . ...
T Consensus       178 ~~~~~~i~r~~~v~Gp~~~~~~~~~~~~~~~~~~~~~~~~g~g~~~~~~i~v~D~a~a~~~~~~-----------~-~~~  245 (355)
T PRK10217        178 YGLPTLITNCSNNYGPYHFPEKLIPLMILNALAGKPLPVYGNGQQIRDWLYVEDHARALYCVAT-----------T-GKV  245 (355)
T ss_pred             hCCCeEEEeeeeeeCCCCCcccHHHHHHHHHhcCCCceEeCCCCeeeCcCcHHHHHHHHHHHHh-----------c-CCC
Confidence            3567999999999999973  4677787877888777778999999999999999999999986           2 235


Q ss_pred             CccEEecCCCCCCHHHHHHHHHHhcCCCCCccccCHHHHHHHHHHHHHHHHhhhhccccccCCCCCCcHHhhhhhcccce
Q 017760          149 GQPYFVSDGFPINTFEFIGPLLKTLDYDLPKSWLAVPHALFLGKVFSFFYSVLYPWLNRWWLPQPLILPAEVYKVGVTHY  228 (366)
Q Consensus       149 g~~y~I~~~~~vs~~e~~~~l~~~lg~~~~~~~lp~~~~~~~a~~~e~~~~~~~~~~~~~~~~~p~l~~~ev~~~~~~~~  228 (366)
                      +++||+++++++|+.|+++.+++.+|...+...++.  ....+    .        ++    ..+. .+..    .....
T Consensus       246 ~~~yni~~~~~~s~~~~~~~i~~~~~~~~~~~~~~~--~~~~~----~--------~~----~~~~-~~~~----~~~~~  302 (355)
T PRK10217        246 GETYNIGGHNERKNLDVVETICELLEELAPNKPQGV--AHYRD----L--------IT----FVAD-RPGH----DLRYA  302 (355)
T ss_pred             CCeEEeCCCCcccHHHHHHHHHHHhccccccccccc--ccccc----c--------ce----ecCC-CCCC----Ccccc
Confidence            689999999999999999999999986443322211  10000    0        00    0000 0101    01225


Q ss_pred             ecHHHHHHhcCCCCCCChHHHHHHHHHHHHhccc
Q 017760          229 FSLLKAKDELCYVPIVSPREGMAATISYWQDRKR  262 (366)
Q Consensus       229 ~d~~ka~~~LG~~p~~~~~e~l~~~v~~~~~~~~  262 (366)
                      .|++|++++|||+|+++++++++++++||+++..
T Consensus       303 ~d~~k~~~~lg~~p~~~l~e~l~~~~~~~~~~~~  336 (355)
T PRK10217        303 IDASKIARELGWLPQETFESGMRKTVQWYLANES  336 (355)
T ss_pred             cCHHHHHHhcCCCCcCcHHHHHHHHHHHHHhCHH
Confidence            7999999999999999999999999999987644

>PRK11908 NAD-dependent epimerase/dehydratase family protein; Provisional

Probab=99.93  E-value=1.2e-24  Score=209.18  Aligned_cols=162  Identities=15%  Similarity=0.117  Sum_probs=115.4

Q ss_pred             CCceEEEEeCCccccCCCC----------CCHHHHHHHHHcCCCCeeecCCCcceeceeHHHHHHHHHHHHhccccCCCC
Q 017760           71 KCLYTCAVRPAAIYGPGEE----------RHLPRIVSLAKLGLVPFKIGEPSVKTDWIYVDNLVLALILASMGLLDDIPG  140 (366)
Q Consensus        71 ~~l~~~ilRp~~iyGp~~~----------~~l~~~i~~~~~g~~~~~~g~~~~~~~~v~vdDla~a~~~a~~~l~~~~~~  140 (366)
                      .+++++++||+++|||+..          +.++.++..+.+|..+.+.+++++.++|+|++|++++++.++++       
T Consensus       167 ~~~~~~ilR~~~v~Gp~~~~~~~~~~~~~~~i~~~~~~~~~~~~~~~~~~g~~~r~~i~v~D~a~a~~~~~~~-------  239 (347)
T PRK11908        167 EGLNFTLFRPFNWIGPGLDSIYTPKEGSSRVVTQFLGHIVRGEPISLVDGGSQKRAFTDIDDGIDALMKIIEN-------  239 (347)
T ss_pred             cCCCeEEEeeeeeeCCCccCCCccccCCcchHHHHHHHHhCCCceEEecCCceeeccccHHHHHHHHHHHHhC-------
Confidence            4678999999999999742          35678888888888777778889999999999999999999873       


Q ss_pred             CCCCC-CCCCccEEecCC-CCCCHHHHHHHHHHhcCCCCCccccCHHHHHHHHHHHHHHHHhhhhccccccCCCCCCcHH
Q 017760          141 QKGRP-IASGQPYFVSDG-FPINTFEFIGPLLKTLDYDLPKSWLAVPHALFLGKVFSFFYSVLYPWLNRWWLPQPLILPA  218 (366)
Q Consensus       141 ~~~~~-~~~g~~y~I~~~-~~vs~~e~~~~l~~~lg~~~~~~~lp~~~~~~~a~~~e~~~~~~~~~~~~~~~~~p~l~~~  218 (366)
                         .+ ...|++|||+++ ..+|+.|+++.+.+.+|..+.....+..+.     +.+              .+.+.....
T Consensus       240 ---~~~~~~g~~yni~~~~~~~s~~e~~~~i~~~~~~~~~~~~~~~~~~-----~~~--------------~~~~~~~~~  297 (347)
T PRK11908        240 ---KDGVASGKIYNIGNPKNNHSVRELANKMLELAAEYPEYAESAKKVK-----LVE--------------TTSGAYYGK  297 (347)
T ss_pred             ---ccccCCCCeEEeCCCCCCcCHHHHHHHHHHHhcCcccccccccccc-----ccc--------------CCchhccCc
Confidence               11 245789999987 479999999999999985432211000000     000              000000000


Q ss_pred             hhhhhcccceecHHHHHHhcCCCCCCChHHHHHHHHHHHHhccc
Q 017760          219 EVYKVGVTHYFSLLKAKDELCYVPIVSPREGMAATISYWQDRKR  262 (366)
Q Consensus       219 ev~~~~~~~~~d~~ka~~~LG~~p~~~~~e~l~~~v~~~~~~~~  262 (366)
                      . .........|++|++++|||+|+++++++++++++|++++.+
T Consensus       298 ~-~~~~~~~~~d~~k~~~~lGw~p~~~l~~~l~~~~~~~~~~~~  340 (347)
T PRK11908        298 G-YQDVQNRVPKIDNTMQELGWAPKTTMDDALRRIFEAYRGHVA  340 (347)
T ss_pred             C-cchhccccCChHHHHHHcCCCCCCcHHHHHHHHHHHHHHHHH
Confidence            0 000112246899999999999999999999999999987654

>PF01073 3Beta_HSD: 3-beta hydroxysteroid dehydrogenase/isomerase family; InterPro: IPR002225 The enzyme 3 beta-hydroxysteroid dehydrogenase/5-ene-4-ene isomerase (3 beta-HSD) catalyses the oxidation and isomerisation of 5-ene-3 beta-hydroxypregnene and 5-ene-hydroxyandrostene steroid precursors into the corresponding 4-ene-ketosteroids necessary for the formation of all classes of steroid hormones

Probab=99.93  E-value=5.4e-25  Score=204.94  Aligned_cols=165  Identities=41%  Similarity=0.721  Sum_probs=138.6

Q ss_pred             EEEcCCChhHHHHHHHHHHcCC-ceEEEEecCCCCcccccccCCCe-EEEEcc---------------------------
Q 017760           15 LVTGGLGHVGSALCLELVRRGA-YQVRAFDLRTNSPWSHLLINHGV-HCIQGL---------------------------   65 (366)
Q Consensus        15 lITGgtGfiG~~L~~~L~~~g~-~~V~~~dr~~~~~~~~~~~~~~v-~~i~gD---------------------------   65 (366)
                      |||||+||+|++|+++|+++|. ++|+++|+.++..........+. +++++|                           
T Consensus         1 LVTGgsGflG~~iv~~Ll~~g~~~~Vr~~d~~~~~~~~~~~~~~~~~~~~~~Di~d~~~l~~a~~g~d~V~H~Aa~~~~~   80 (280)
T PF01073_consen    1 LVTGGSGFLGSHIVRQLLERGYIYEVRVLDRSPPPKFLKDLQKSGVKEYIQGDITDPESLEEALEGVDVVFHTAAPVPPW   80 (280)
T ss_pred             CEEcCCcHHHHHHHHHHHHCCCceEEEEcccccccccchhhhcccceeEEEeccccHHHHHHHhcCCceEEEeCcccccc
Confidence            6999999999999999999992 48999999876654333333333 488998                           


Q ss_pred             ------------------------------------------------------------------------------cc
Q 017760           66 ------------------------------------------------------------------------------RK   67 (366)
Q Consensus        66 ------------------------------------------------------------------------------ks   67 (366)
                                                                                                    ++
T Consensus        81 ~~~~~~~~~~vNV~GT~nvl~aa~~~~VkrlVytSS~~vv~~~~~~~~~~~~dE~~~~~~~~~~~Y~~SK~~AE~~V~~a  160 (280)
T PF01073_consen   81 GDYPPEEYYKVNVDGTRNVLEAARKAGVKRLVYTSSISVVFDNYKGDPIINGDEDTPYPSSPLDPYAESKALAEKAVLEA  160 (280)
T ss_pred             CcccHHHHHHHHHHHHHHHHHHHHHcCCCEEEEEcCcceeEeccCCCCcccCCcCCcccccccCchHHHHHHHHHHHHhh
Confidence                                                                                          11


Q ss_pred             C-----CCCCceEEEEeCCccccCCCCCCHHHHHHHHHcCCCCeeecCCCcceeceeHHHHHHHHHHHHhccccCCCCCC
Q 017760           68 N-----NRKCLYTCAVRPAAIYGPGEERHLPRIVSLAKLGLVPFKIGEPSVKTDWIYVDNLVLALILASMGLLDDIPGQK  142 (366)
Q Consensus        68 ~-----~~~~l~~~ilRp~~iyGp~~~~~l~~~i~~~~~g~~~~~~g~~~~~~~~v~vdDla~a~~~a~~~l~~~~~~~~  142 (366)
                      .     ....+.+|+|||+.||||++....+.+.+.+++|...+..|+++...+++||+|+|+||++|+++|.+.    .
T Consensus       161 ~~~~~~~g~~l~t~~lRP~~IyGp~d~~~~~~~~~~~~~g~~~~~~g~~~~~~~~vyV~NvA~ahvlA~~~L~~~----~  236 (280)
T PF01073_consen  161 NGSELKNGGRLRTCALRPAGIYGPGDQRLVPRLVKMVRSGLFLFQIGDGNNLFDFVYVENVAHAHVLAAQALLEP----G  236 (280)
T ss_pred             cccccccccceeEEEEeccEEeCcccccccchhhHHHHhcccceeecCCCceECcEeHHHHHHHHHHHHHHhccc----c
Confidence            1     124699999999999999999999999999999977788999999999999999999999999987663    1


Q ss_pred             CCCCCCCccEEecCCCCCC-HHHHHHHHHHhcCCCCCc-cccC
Q 017760          143 GRPIASGQPYFVSDGFPIN-TFEFIGPLLKTLDYDLPK-SWLA  183 (366)
Q Consensus       143 ~~~~~~g~~y~I~~~~~vs-~~e~~~~l~~~lg~~~~~-~~lp  183 (366)
                      +.....||+|+|+|++|++ +.||.+.+.+.+|++.+. +++|
T Consensus       237 ~~~~~~G~~y~itd~~p~~~~~~f~~~~~~~~G~~~~~~~~lp  279 (280)
T PF01073_consen  237 KPERVAGQAYFITDGEPVPSFWDFMRPLWEALGYPPPKSISLP  279 (280)
T ss_pred             ccccCCCcEEEEECCCccCcHHHHHHHHHHHCCCCCCcccCCC
Confidence            1356789999999999999 999999999999999887 7776

3Beta_HSD; GO: 0003854 3-beta-hydroxy-delta5-steroid dehydrogenase activity, 0016616 oxidoreductase activity, acting on the CH-OH group of donors, NAD or NADP as acceptor, 0006694 steroid biosynthetic process, 0055114 oxidation-reduction process

>PLN02695 GDP-D-mannose-3',5'-epimerase

Probab=99.93  E-value=3.2e-24  Score=207.81  Aligned_cols=147  Identities=15%  Similarity=0.123  Sum_probs=114.0

Q ss_pred             CCceEEEEeCCccccCCCC------CCHHHHHHHHHc-CCCCeeecCCCcceeceeHHHHHHHHHHHHhccccCCCCCCC
Q 017760           71 KCLYTCAVRPAAIYGPGEE------RHLPRIVSLAKL-GLVPFKIGEPSVKTDWIYVDNLVLALILASMGLLDDIPGQKG  143 (366)
Q Consensus        71 ~~l~~~ilRp~~iyGp~~~------~~l~~~i~~~~~-g~~~~~~g~~~~~~~~v~vdDla~a~~~a~~~l~~~~~~~~~  143 (366)
                      .+++++++||+++|||++.      ...+.++..+.+ +..+.++|++++.++|+|++|+++++..+++           
T Consensus       185 ~g~~~~ilR~~~vyGp~~~~~~~~~~~~~~~~~~~~~~~~~i~~~g~g~~~r~~i~v~D~a~ai~~~~~-----------  253 (370)
T PLN02695        185 FGIECRIGRFHNIYGPFGTWKGGREKAPAAFCRKALTSTDEFEMWGDGKQTRSFTFIDECVEGVLRLTK-----------  253 (370)
T ss_pred             hCCCEEEEEECCccCCCCCccccccccHHHHHHHHHcCCCCeEEeCCCCeEEeEEeHHHHHHHHHHHHh-----------
Confidence            4677999999999999753      235567666554 4566678999999999999999999998875           


Q ss_pred             CCCCCCccEEecCCCCCCHHHHHHHHHHhcCCCCCccccCHHHHHHHHHHHHHHHHhhhhccccccCCCCCCcHHhhhhh
Q 017760          144 RPIASGQPYFVSDGFPINTFEFIGPLLKTLDYDLPKSWLAVPHALFLGKVFSFFYSVLYPWLNRWWLPQPLILPAEVYKV  223 (366)
Q Consensus       144 ~~~~~g~~y~I~~~~~vs~~e~~~~l~~~lg~~~~~~~lp~~~~~~~a~~~e~~~~~~~~~~~~~~~~~p~l~~~ev~~~  223 (366)
                      ..  .+++||+++++++|+.|+++.+.+..|.+.+....|                            .+.    ..   
T Consensus       254 ~~--~~~~~nv~~~~~~s~~el~~~i~~~~g~~~~i~~~~----------------------------~~~----~~---  296 (370)
T PLN02695        254 SD--FREPVNIGSDEMVSMNEMAEIALSFENKKLPIKHIP----------------------------GPE----GV---  296 (370)
T ss_pred             cc--CCCceEecCCCceeHHHHHHHHHHHhCCCCCceecC----------------------------CCC----Cc---
Confidence            22  357999999999999999999999998755433221                            110    00   


Q ss_pred             cccceecHHHHHHhcCCCCCCChHHHHHHHHHHHHhccccCCC
Q 017760          224 GVTHYFSLLKAKDELCYVPIVSPREGMAATISYWQDRKRKSLD  266 (366)
Q Consensus       224 ~~~~~~d~~ka~~~LG~~p~~~~~e~l~~~v~~~~~~~~~~~~  266 (366)
                       .....|++|++++|||+|+++++++|+++++|++++....+.
T Consensus       297 -~~~~~d~sk~~~~lgw~p~~~l~e~i~~~~~~~~~~~~~~~~  338 (370)
T PLN02695        297 -RGRNSDNTLIKEKLGWAPTMRLKDGLRITYFWIKEQIEKEKA  338 (370)
T ss_pred             -cccccCHHHHHHhcCCCCCCCHHHHHHHHHHHHHHHHHhhhc
Confidence             012479999999999999999999999999999887665543

>PLN02427 UDP-apiose/xylose synthase

Probab=99.92  E-value=3.2e-24  Score=209.14  Aligned_cols=157  Identities=13%  Similarity=0.094  Sum_probs=111.1

Q ss_pred             CCceEEEEeCCccccCCCC-------------CCHHHHHHHHHcCCCCeeecCCCcceeceeHHHHHHHHHHHHhccccC
Q 017760           71 KCLYTCAVRPAAIYGPGEE-------------RHLPRIVSLAKLGLVPFKIGEPSVKTDWIYVDNLVLALILASMGLLDD  137 (366)
Q Consensus        71 ~~l~~~ilRp~~iyGp~~~-------------~~l~~~i~~~~~g~~~~~~g~~~~~~~~v~vdDla~a~~~a~~~l~~~  137 (366)
                      .+++++++||++||||++.             ..++.++..+.+++.+.+.|++++.++|+||+|+|++++.++++    
T Consensus       200 ~g~~~~ilR~~~vyGp~~~~~~~~~~~~~~~~~~i~~~~~~~~~~~~~~~~g~g~~~r~~i~V~Dva~ai~~al~~----  275 (386)
T PLN02427        200 NGLEFTIVRPFNWIGPRMDFIPGIDGPSEGVPRVLACFSNNLLRREPLKLVDGGQSQRTFVYIKDAIEAVLLMIEN----  275 (386)
T ss_pred             cCCceEEecccceeCCCCCccccccccccccchHHHHHHHHHhcCCCeEEECCCCceECcEeHHHHHHHHHHHHhC----
Confidence            3689999999999999753             12344556677788778888889999999999999999999872    


Q ss_pred             CCCCCCCCCCCCccEEecCC-CCCCHHHHHHHHHHhcCCCCC-cc-ccCHHHHHHHHHHHHHHHHhhhhccccccCCCCC
Q 017760          138 IPGQKGRPIASGQPYFVSDG-FPINTFEFIGPLLKTLDYDLP-KS-WLAVPHALFLGKVFSFFYSVLYPWLNRWWLPQPL  214 (366)
Q Consensus       138 ~~~~~~~~~~~g~~y~I~~~-~~vs~~e~~~~l~~~lg~~~~-~~-~lp~~~~~~~a~~~e~~~~~~~~~~~~~~~~~p~  214 (366)
                            .....|++||++++ +++|+.|+++.+.+.+|.... .. ..+.  .                     ..+...
T Consensus       276 ------~~~~~g~~yni~~~~~~~s~~el~~~i~~~~g~~~~~~~~~~~~--~---------------------~~~~~~  326 (386)
T PLN02427        276 ------PARANGHIFNVGNPNNEVTVRQLAEMMTEVYAKVSGEPALEEPT--V---------------------DVSSKE  326 (386)
T ss_pred             ------cccccCceEEeCCCCCCccHHHHHHHHHHHhccccccccccccc--c---------------------ccCccc
Confidence                  11245789999987 589999999999999984211 00 0000  0                     000100


Q ss_pred             CcHHhhhhhcccceecHHHHHHhcCCCCCCChHHHHHHHHHHHHhcc
Q 017760          215 ILPAEVYKVGVTHYFSLLKAKDELCYVPIVSPREGMAATISYWQDRK  261 (366)
Q Consensus       215 l~~~ev~~~~~~~~~d~~ka~~~LG~~p~~~~~e~l~~~v~~~~~~~  261 (366)
                      ..+.. ..-......|++|++++|||+|+++++++|+++++|+++.-
T Consensus       327 ~~~~~-~~~~~~~~~d~~k~~~~lGw~p~~~l~~gl~~~~~~~~~~~  372 (386)
T PLN02427        327 FYGEG-YDDSDKRIPDMTIINKQLGWNPKTSLWDLLESTLTYQHKTY  372 (386)
T ss_pred             ccCcc-ccchhhccCCHHHHHHhcCCCcCccHHHHHHHHHHHHHHHH
Confidence            00000 00011225699999999999999999999999999987643

>TIGR02622 CDP_4_6_dhtase CDP-glucose 4,6-dehydratase

Probab=99.92  E-value=2.6e-24  Score=206.91  Aligned_cols=153  Identities=16%  Similarity=0.161  Sum_probs=114.9

Q ss_pred             CceEEEEeCCccccCCC---CCCHHHHHHHHHcCCCCeeecCCCcceeceeHHHHHHHHHHHHhccccCCCCCCCCCCCC
Q 017760           72 CLYTCAVRPAAIYGPGE---ERHLPRIVSLAKLGLVPFKIGEPSVKTDWIYVDNLVLALILASMGLLDDIPGQKGRPIAS  148 (366)
Q Consensus        72 ~l~~~ilRp~~iyGp~~---~~~l~~~i~~~~~g~~~~~~g~~~~~~~~v~vdDla~a~~~a~~~l~~~~~~~~~~~~~~  148 (366)
                      +++++++||+++|||++   .+.++.++..+.+|..+ .++++++.++|+|++|+|+|++.+++++.+       .+...
T Consensus       178 ~i~~~~lR~~~vyGp~~~~~~~~~~~~~~~~~~g~~~-~~~~g~~~rd~i~v~D~a~a~~~~~~~~~~-------~~~~~  249 (349)
T TIGR02622       178 GIKIASARAGNVIGGGDWAEDRLIPDVIRAFSSNKIV-IIRNPDATRPWQHVLEPLSGYLLLAEKLFT-------GQAEF  249 (349)
T ss_pred             CCcEEEEccCcccCCCcchhhhhhHHHHHHHhcCCCe-EECCCCcccceeeHHHHHHHHHHHHHHHhh-------cCccc
Confidence            78999999999999985   35678888888888764 467889999999999999999998874322       11233


Q ss_pred             CccEEecCC--CCCCHHHHHHHHHHhcCCCCCccccCHHHHHHHHHHHHHHHHhhhhccccccCCCCCCcHHhhhhhccc
Q 017760          149 GQPYFVSDG--FPINTFEFIGPLLKTLDYDLPKSWLAVPHALFLGKVFSFFYSVLYPWLNRWWLPQPLILPAEVYKVGVT  226 (366)
Q Consensus       149 g~~y~I~~~--~~vs~~e~~~~l~~~lg~~~~~~~lp~~~~~~~a~~~e~~~~~~~~~~~~~~~~~p~l~~~ev~~~~~~  226 (366)
                      +++|||+++  ++++..|+++.+.+.++.....+..                            +.....+.+.    ..
T Consensus       250 ~~~yni~s~~~~~~s~~~~~~~i~~~~~~~~~~~~~----------------------------~~~~~~~~~~----~~  297 (349)
T TIGR02622       250 AGAWNFGPRASDNARVVELVVDALEFWWGDDAEWED----------------------------DSDLNHPHEA----RL  297 (349)
T ss_pred             cceeeeCCCcccCcCHHHHHHHHHHHhcCCCCceee----------------------------ccCCCCCccc----ce
Confidence            579999964  7899999999999887632111111                            0001111111    12


Q ss_pred             ceecHHHHHHhcCCCCCCChHHHHHHHHHHHHhccccC
Q 017760          227 HYFSLLKAKDELCYVPIVSPREGMAATISYWQDRKRKS  264 (366)
Q Consensus       227 ~~~d~~ka~~~LG~~p~~~~~e~l~~~v~~~~~~~~~~  264 (366)
                      ...|++|++++|||+|+++++++++++++|+++.-+..
T Consensus       298 ~~~d~~k~~~~lgw~p~~~l~~gi~~~i~w~~~~~~~~  335 (349)
T TIGR02622       298 LKLDSSKARTLLGWHPRWGLEEAVSRTVDWYKAWLRGE  335 (349)
T ss_pred             eecCHHHHHHHhCCCCCCCHHHHHHHHHHHHHHHhcCC
Confidence            35799999999999999999999999999998876554

Members of this protein family are CDP-glucose 4,6-dehydratase from a variety of Gram-negative and Gram-positive bacteria. Members typically are encoded next to a gene that encodes a glucose-1-phosphate cytidylyltransferase, which produces the substrate, CDP-D-glucose, used by this enzyme to produce CDP-4-keto-6-deoxyglucose.

>PRK08125 bifunctional UDP-glucuronic acid decarboxylase/UDP-4-amino-4-deoxy-L-arabinose formyltransferase; Validated

Probab=99.92  E-value=3.5e-24  Score=222.06  Aligned_cols=162  Identities=14%  Similarity=0.085  Sum_probs=118.0

Q ss_pred             CCceEEEEeCCccccCCCC----------CCHHHHHHHHHcCCCCeeecCCCcceeceeHHHHHHHHHHHHhccccCCCC
Q 017760           71 KCLYTCAVRPAAIYGPGEE----------RHLPRIVSLAKLGLVPFKIGEPSVKTDWIYVDNLVLALILASMGLLDDIPG  140 (366)
Q Consensus        71 ~~l~~~ilRp~~iyGp~~~----------~~l~~~i~~~~~g~~~~~~g~~~~~~~~v~vdDla~a~~~a~~~l~~~~~~  140 (366)
                      .+++++++||+++|||++.          +.++.++..+.+|+.+.+.|++++.++|+|++|+|++++.++++       
T Consensus       481 ~g~~~~ilR~~~vyGp~~~~~~~~~~~~~~~i~~~i~~~~~~~~i~~~g~g~~~rd~i~v~Dva~a~~~~l~~-------  553 (660)
T PRK08125        481 EGLRFTLFRPFNWMGPRLDNLNAARIGSSRAITQLILNLVEGSPIKLVDGGKQKRCFTDIRDGIEALFRIIEN-------  553 (660)
T ss_pred             cCCceEEEEEceeeCCCccccccccccccchHHHHHHHhcCCCCeEEeCCCceeeceeeHHHHHHHHHHHHhc-------
Confidence            3688999999999999853          35778888888888877889999999999999999999999873       


Q ss_pred             CCCCC-CCCCccEEecCCC-CCCHHHHHHHHHHhcCCCCCccccCHHHHHHHHHHHHHHHHhhhhccccccCCCCCCcHH
Q 017760          141 QKGRP-IASGQPYFVSDGF-PINTFEFIGPLLKTLDYDLPKSWLAVPHALFLGKVFSFFYSVLYPWLNRWWLPQPLILPA  218 (366)
Q Consensus       141 ~~~~~-~~~g~~y~I~~~~-~vs~~e~~~~l~~~lg~~~~~~~lp~~~~~~~a~~~e~~~~~~~~~~~~~~~~~p~l~~~  218 (366)
                         .+ ...|++|||++++ .+|+.|+++.+.+.+|.+.....+|......             +.      +.....+ 
T Consensus       554 ---~~~~~~g~iyni~~~~~~~s~~el~~~i~~~~g~~~~~~~~~~~~~~~-------------~~------~~~~~~~-  610 (660)
T PRK08125        554 ---KDNRCDGQIINIGNPDNEASIRELAEMLLASFEKHPLRDHFPPFAGFR-------------VV------ESSSYYG-  610 (660)
T ss_pred             ---cccccCCeEEEcCCCCCceeHHHHHHHHHHHhccCcccccCCcccccc-------------cc------ccccccc-
Confidence               11 2357899999985 7999999999999999653333332211000             00      0000000 


Q ss_pred             hhhhhcccceecHHHHHHhcCCCCCCChHHHHHHHHHHHHhccc
Q 017760          219 EVYKVGVTHYFSLLKAKDELCYVPIVSPREGMAATISYWQDRKR  262 (366)
Q Consensus       219 ev~~~~~~~~~d~~ka~~~LG~~p~~~~~e~l~~~v~~~~~~~~  262 (366)
                      ...........|++|++++|||+|+++++++|+++++||+++..
T Consensus       611 ~~~~~~~~~~~d~~ka~~~LGw~P~~~lee~l~~~i~~~~~~~~  654 (660)
T PRK08125        611 KGYQDVEHRKPSIRNARRLLDWEPKIDMQETIDETLDFFLRTVD  654 (660)
T ss_pred             cccccccccCCChHHHHHHhCCCCCCcHHHHHHHHHHHHHhccc
Confidence            00000112247999999999999999999999999999987654

>KOG0747 consensus Putative NAD+-dependent epimerases [Carbohydrate transport and metabolism]

Probab=99.92  E-value=2.2e-24  Score=192.35  Aligned_cols=153  Identities=16%  Similarity=0.220  Sum_probs=123.5

Q ss_pred             CCCCCceEEEEeCCccccCCCC--CCHHHHHHHHHcCCCCeeecCCCcceeceeHHHHHHHHHHHHhccccCCCCCCCCC
Q 017760           68 NNRKCLYTCAVRPAAIYGPGEE--RHLPRIVSLAKLGLVPFKIGEPSVKTDWIYVDNLVLALILASMGLLDDIPGQKGRP  145 (366)
Q Consensus        68 ~~~~~l~~~ilRp~~iyGp~~~--~~l~~~i~~~~~g~~~~~~g~~~~~~~~v~vdDla~a~~~a~~~l~~~~~~~~~~~  145 (366)
                      ..+++++++++|.++||||+.-  ..+|+++..++.+....+.|+|.+.++|+||+|+++|+..+.++            
T Consensus       172 ~~sy~lpvv~~R~nnVYGP~q~~~klipkFi~l~~~~~~~~i~g~g~~~rs~l~veD~~ea~~~v~~K------------  239 (331)
T KOG0747|consen  172 GRSYGLPVVTTRMNNVYGPNQYPEKLIPKFIKLAMRGKEYPIHGDGLQTRSYLYVEDVSEAFKAVLEK------------  239 (331)
T ss_pred             hhccCCcEEEEeccCccCCCcChHHHhHHHHHHHHhCCCcceecCcccceeeEeHHHHHHHHHHHHhc------------
Confidence            5678999999999999999873  57899999998999889999999999999999999999999962            


Q ss_pred             CCCCccEEecCCCCCCHHHHHHHHHHhcCCCCCccccCHHHHHHHHHHHHHHHHhhhhccccccCCCCCCcHHhhhhhcc
Q 017760          146 IASGQPYFVSDGFPINTFEFIGPLLKTLDYDLPKSWLAVPHALFLGKVFSFFYSVLYPWLNRWWLPQPLILPAEVYKVGV  225 (366)
Q Consensus       146 ~~~g~~y~I~~~~~vs~~e~~~~l~~~lg~~~~~~~lp~~~~~~~a~~~e~~~~~~~~~~~~~~~~~p~l~~~ev~~~~~  225 (366)
                      ...|++|||+++.+.++-|+++.+.+..++..+....+.+...                     .+.++.       .+.
T Consensus       240 g~~geIYNIgtd~e~~~~~l~k~i~eli~~~~~~~~~~p~~~~---------------------v~dRp~-------nd~  291 (331)
T KOG0747|consen  240 GELGEIYNIGTDDEMRVIDLAKDICELFEKRLPNIDTEPFIFF---------------------VEDRPY-------NDL  291 (331)
T ss_pred             CCccceeeccCcchhhHHHHHHHHHHHHHHhccCCCCCCccee---------------------cCCCCc-------ccc
Confidence            5579999999999999999999999999876553322211100                     011111       111


Q ss_pred             cceecHHHHHHhcCCCCCCChHHHHHHHHHHHHhcc
Q 017760          226 THYFSLLKAKDELCYVPIVSPREGMAATISYWQDRK  261 (366)
Q Consensus       226 ~~~~d~~ka~~~LG~~p~~~~~e~l~~~v~~~~~~~  261 (366)
                      ....|++|++ .|||+|+++++++|+++++||.++.
T Consensus       292 Ry~~~~eKik-~LGw~~~~p~~eGLrktie~y~~~~  326 (331)
T KOG0747|consen  292 RYFLDDEKIK-KLGWRPTTPWEEGLRKTIEWYTKNF  326 (331)
T ss_pred             cccccHHHHH-hcCCcccCcHHHHHHHHHHHHHhhh
Confidence            1357999999 7999999999999999999998765

>TIGR01472 gmd GDP-mannose 4,6-dehydratase

Probab=99.92  E-value=8e-24  Score=203.06  Aligned_cols=162  Identities=19%  Similarity=0.177  Sum_probs=107.9

Q ss_pred             CCceEEEEeCCccccCCCCC-----CHHHHHHHHHcCCC-CeeecCCCcceeceeHHHHHHHHHHHHhccccCCCCCCCC
Q 017760           71 KCLYTCAVRPAAIYGPGEER-----HLPRIVSLAKLGLV-PFKIGEPSVKTDWIYVDNLVLALILASMGLLDDIPGQKGR  144 (366)
Q Consensus        71 ~~l~~~ilRp~~iyGp~~~~-----~l~~~i~~~~~g~~-~~~~g~~~~~~~~v~vdDla~a~~~a~~~l~~~~~~~~~~  144 (366)
                      .+++++..|+.++|||+...     .+..++..+..|+. ...+|++++.++|+||+|+|++++.++++           
T Consensus       174 ~~~~~~~~~~~~~~gp~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~g~~~rd~i~V~D~a~a~~~~~~~-----------  242 (343)
T TIGR01472       174 YGLFAVNGILFNHESPRRGENFVTRKITRAAAKIKLGLQEKLYLGNLDAKRDWGHAKDYVEAMWLMLQQ-----------  242 (343)
T ss_pred             hCCceEEEeecccCCCCCCccccchHHHHHHHHHHcCCCCceeeCCCccccCceeHHHHHHHHHHHHhc-----------
Confidence            46778889999999997431     23445556666753 45569999999999999999999999862           


Q ss_pred             CCCCCccEEecCCCCCCHHHHHHHHHHhcCCCCCccccCHHHHHHHHHHHHHHHHhhhhccccccCCCCCCcHHhhhhhc
Q 017760          145 PIASGQPYFVSDGFPINTFEFIGPLLKTLDYDLPKSWLAVPHALFLGKVFSFFYSVLYPWLNRWWLPQPLILPAEVYKVG  224 (366)
Q Consensus       145 ~~~~g~~y~I~~~~~vs~~e~~~~l~~~lg~~~~~~~lp~~~~~~~a~~~e~~~~~~~~~~~~~~~~~p~l~~~ev~~~~  224 (366)
                      +  .++.|||++++++|+.|+++.+.+.+|.+.+....|....   ....+.. ...   ..   .......+.++..  
T Consensus       243 ~--~~~~yni~~g~~~s~~e~~~~i~~~~g~~~~~~~~~~~~~---~~~~~~~-~~~---~~---~~~~~~~~~~~~~--  308 (343)
T TIGR01472       243 D--KPDDYVIATGETHSVREFVEVSFEYIGKTLNWKDKGINEV---GRCKETG-KVH---VE---IDPRYFRPTEVDL--  308 (343)
T ss_pred             C--CCccEEecCCCceeHHHHHHHHHHHcCCCccccccccccc---ccccccC-cee---EE---eCccccCCCccch--
Confidence            2  2358999999999999999999999996542111000000   0000000 000   00   0011112222211  


Q ss_pred             ccceecHHHHHHhcCCCCCCChHHHHHHHHHHHHh
Q 017760          225 VTHYFSLLKAKDELCYVPIVSPREGMAATISYWQD  259 (366)
Q Consensus       225 ~~~~~d~~ka~~~LG~~p~~~~~e~l~~~v~~~~~  259 (366)
                        ...|++|++++|||+|+++++|+|++++++|++
T Consensus       309 --~~~d~~k~~~~lgw~p~~~l~egi~~~~~~~~~  341 (343)
T TIGR01472       309 --LLGDATKAKEKLGWKPEVSFEKLVKEMVEEDLE  341 (343)
T ss_pred             --hcCCHHHHHHhhCCCCCCCHHHHHHHHHHHHHh
Confidence              146999999999999999999999999999974

Excluded from this model are members of the clade that score poorly because of highly dervied (phylogenetically long-branch) sequences, e.g. Aneurinibacillus thermoaerophilus Gmd, described as a bifunctional GDP-mannose 4,6-dehydratase/GDP-6-deoxy-D-lyxo-4-hexulose reductase (PUBMED:11096116).

>PLN02260 probable rhamnose biosynthetic enzyme

Probab=99.91  E-value=1.9e-23  Score=217.25  Aligned_cols=146  Identities=18%  Similarity=0.243  Sum_probs=115.9

Q ss_pred             CCceEEEEeCCccccCCCC--CCHHHHHHHHHcCCCCeeecCCCcceeceeHHHHHHHHHHHHhccccCCCCCCCCCCCC
Q 017760           71 KCLYTCAVRPAAIYGPGEE--RHLPRIVSLAKLGLVPFKIGEPSVKTDWIYVDNLVLALILASMGLLDDIPGQKGRPIAS  148 (366)
Q Consensus        71 ~~l~~~ilRp~~iyGp~~~--~~l~~~i~~~~~g~~~~~~g~~~~~~~~v~vdDla~a~~~a~~~l~~~~~~~~~~~~~~  148 (366)
                      .+++++++||++||||++.  ..++.++..+.+|..+.+.|++++.++|+||+|+|+++..++++            ...
T Consensus       177 ~~l~~vilR~~~VyGp~~~~~~~i~~~~~~a~~g~~i~i~g~g~~~r~~ihV~Dva~a~~~~l~~------------~~~  244 (668)
T PLN02260        177 YGLPVITTRGNNVYGPNQFPEKLIPKFILLAMQGKPLPIHGDGSNVRSYLYCEDVAEAFEVVLHK------------GEV  244 (668)
T ss_pred             cCCCEEEECcccccCcCCCcccHHHHHHHHHhCCCCeEEecCCCceEeeEEHHHHHHHHHHHHhc------------CCC
Confidence            4778999999999999873  46788888888888878889999999999999999999998852            234


Q ss_pred             CccEEecCCCCCCHHHHHHHHHHhcCCCCCccccCHHHHHHHHHHHHHHHHhhhhccccccCCCCCCcHHhhhhhcccce
Q 017760          149 GQPYFVSDGFPINTFEFIGPLLKTLDYDLPKSWLAVPHALFLGKVFSFFYSVLYPWLNRWWLPQPLILPAEVYKVGVTHY  228 (366)
Q Consensus       149 g~~y~I~~~~~vs~~e~~~~l~~~lg~~~~~~~lp~~~~~~~a~~~e~~~~~~~~~~~~~~~~~p~l~~~ev~~~~~~~~  228 (366)
                      +++||+++++++|+.|+++.+++.+|.+.+.. +.                         +.+.++..       .....
T Consensus       245 ~~vyni~~~~~~s~~el~~~i~~~~g~~~~~~-i~-------------------------~~~~~p~~-------~~~~~  291 (668)
T PLN02260        245 GHVYNIGTKKERRVIDVAKDICKLFGLDPEKS-IK-------------------------FVENRPFN-------DQRYF  291 (668)
T ss_pred             CCEEEECCCCeeEHHHHHHHHHHHhCCCCcce-ee-------------------------ecCCCCCC-------cceee
Confidence            68999999999999999999999999754311 00                         00111111       11235


Q ss_pred             ecHHHHHHhcCCCCCCChHHHHHHHHHHHHhccc
Q 017760          229 FSLLKAKDELCYVPIVSPREGMAATISYWQDRKR  262 (366)
Q Consensus       229 ~d~~ka~~~LG~~p~~~~~e~l~~~v~~~~~~~~  262 (366)
                      .|++|++ +|||+|+++++|+++++++||+++..
T Consensus       292 ~d~~k~~-~lGw~p~~~~~egl~~~i~w~~~~~~  324 (668)
T PLN02260        292 LDDQKLK-KLGWQERTSWEEGLKKTMEWYTSNPD  324 (668)
T ss_pred             cCHHHHH-HcCCCCCCCHHHHHHHHHHHHHhChh
Confidence            7999997 59999999999999999999987654

>PLN02572 UDP-sulfoquinovose synthase

Probab=99.91  E-value=2e-23  Score=206.42  Aligned_cols=152  Identities=17%  Similarity=0.180  Sum_probs=113.1

Q ss_pred             CceEEEEeCCccccCCCC-------------------CCHHHHHHHHHcCCCCeeecCCCcceeceeHHHHHHHHHHHHh
Q 017760           72 CLYTCAVRPAAIYGPGEE-------------------RHLPRIVSLAKLGLVPFKIGEPSVKTDWIYVDNLVLALILASM  132 (366)
Q Consensus        72 ~l~~~ilRp~~iyGp~~~-------------------~~l~~~i~~~~~g~~~~~~g~~~~~~~~v~vdDla~a~~~a~~  132 (366)
                      +++++++||+++|||++.                   ..++.++..+.+|+.+.++|++++.+||+||+|+|++++.+++
T Consensus       247 gl~~v~lR~~~vyGp~~~~~~~~~~li~~~~~~~~~~~~i~~~~~~~~~g~~i~v~g~G~~~Rdfi~V~Dva~a~~~al~  326 (442)
T PLN02572        247 GIRATDLNQGVVYGVRTDETMMDEELINRLDYDGVFGTALNRFCVQAAVGHPLTVYGKGGQTRGFLDIRDTVRCIEIAIA  326 (442)
T ss_pred             CCCEEEEecccccCCCCcccccccccccccCcccchhhHHHHHHHHHhcCCCceecCCCCEEECeEEHHHHHHHHHHHHh
Confidence            677999999999999853                   2355666777778877788999999999999999999999986


Q ss_pred             ccccCCCCCCCCCCCCC--ccEEecCCCCCCHHHHHHHHHHh---cCCCCCccccCHHHHHHHHHHHHHHHHhhhhcccc
Q 017760          133 GLLDDIPGQKGRPIASG--QPYFVSDGFPINTFEFIGPLLKT---LDYDLPKSWLAVPHALFLGKVFSFFYSVLYPWLNR  207 (366)
Q Consensus       133 ~l~~~~~~~~~~~~~~g--~~y~I~~~~~vs~~e~~~~l~~~---lg~~~~~~~lp~~~~~~~a~~~e~~~~~~~~~~~~  207 (366)
                      .           ....|  ++||+++ +++|+.|+++.+.+.   +|.+.+....|                        
T Consensus       327 ~-----------~~~~g~~~i~Nigs-~~~si~el~~~i~~~~~~~g~~~~~~~~p------------------------  370 (442)
T PLN02572        327 N-----------PAKPGEFRVFNQFT-EQFSVNELAKLVTKAGEKLGLDVEVISVP------------------------  370 (442)
T ss_pred             C-----------hhhcCceeEEEeCC-CceeHHHHHHHHHHHHHhhCCCCCeeeCC------------------------
Confidence            2           22233  5899976 679999999999999   88654432221                        


Q ss_pred             ccCCCCCCcHHhhhhhcccceecHHHHHHhcCCCCCC---ChHHHHHHHHHHHHhccccCCCCCc
Q 017760          208 WWLPQPLILPAEVYKVGVTHYFSLLKAKDELCYVPIV---SPREGMAATISYWQDRKRKSLDGPT  269 (366)
Q Consensus       208 ~~~~~p~l~~~ev~~~~~~~~~d~~ka~~~LG~~p~~---~~~e~l~~~v~~~~~~~~~~~~~~~  269 (366)
                          .+. ...+    ......|.+|+++ |||+|++   ++++++.++++||+++-....-.|.
T Consensus       371 ----~~~-~~~~----~~~~~~d~~k~~~-LGw~p~~~~~~l~~~l~~~~~~~~~~~~~~~~~~~  425 (442)
T PLN02572        371 ----NPR-VEAE----EHYYNAKHTKLCE-LGLEPHLLSDSLLDSLLNFAVKYKDRVDTTLILPA  425 (442)
T ss_pred             ----CCc-cccc----ccccCccHHHHHH-cCCCCCCcHHHHHHHHHHHHHHHHhhcchhhcccc
Confidence                111 0101    1122468999975 9999998   8999999999999876665544443

>PLN02653 GDP-mannose 4,6-dehydratase

Probab=99.91  E-value=6.2e-23  Score=196.63  Aligned_cols=146  Identities=18%  Similarity=0.181  Sum_probs=107.8

Q ss_pred             CCceEEEEeCCccccCCCCC-C----HHHHHHHHHcCCCCe-eecCCCcceeceeHHHHHHHHHHHHhccccCCCCCCCC
Q 017760           71 KCLYTCAVRPAAIYGPGEER-H----LPRIVSLAKLGLVPF-KIGEPSVKTDWIYVDNLVLALILASMGLLDDIPGQKGR  144 (366)
Q Consensus        71 ~~l~~~ilRp~~iyGp~~~~-~----l~~~i~~~~~g~~~~-~~g~~~~~~~~v~vdDla~a~~~a~~~l~~~~~~~~~~  144 (366)
                      .+++++..|+.++|||+... .    +..++..+.+|+... ..|++++.++|+||+|+|+|++.++++           
T Consensus       180 ~~~~~~~~~~~~~~gp~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~g~~~rd~i~v~D~a~a~~~~~~~-----------  248 (340)
T PLN02653        180 YGLFACNGILFNHESPRRGENFVTRKITRAVGRIKVGLQKKLFLGNLDASRDWGFAGDYVEAMWLMLQQ-----------  248 (340)
T ss_pred             cCCeEEEeeeccccCCCCCcccchhHHHHHHHHHHcCCCCceEeCCCcceecceeHHHHHHHHHHHHhc-----------
Confidence            35567888999999996532 2    334455566776544 458999999999999999999999972           


Q ss_pred             CCCCCccEEecCCCCCCHHHHHHHHHHhcCCCCC-ccccCHHHHHHHHHHHHHHHHhhhhccccccCCCCCCcHHhhhhh
Q 017760          145 PIASGQPYFVSDGFPINTFEFIGPLLKTLDYDLP-KSWLAVPHALFLGKVFSFFYSVLYPWLNRWWLPQPLILPAEVYKV  223 (366)
Q Consensus       145 ~~~~g~~y~I~~~~~vs~~e~~~~l~~~lg~~~~-~~~lp~~~~~~~a~~~e~~~~~~~~~~~~~~~~~p~l~~~ev~~~  223 (366)
                      .  .++.||+++++++|+.|+++.+.+.+|.+.+ ...+                            ..+...+.++.  
T Consensus       249 ~--~~~~yni~~g~~~s~~e~~~~i~~~~g~~~~~~~~~----------------------------~~~~~~~~~~~--  296 (340)
T PLN02653        249 E--KPDDYVVATEESHTVEEFLEEAFGYVGLNWKDHVEI----------------------------DPRYFRPAEVD--  296 (340)
T ss_pred             C--CCCcEEecCCCceeHHHHHHHHHHHcCCCCCcceee----------------------------CcccCCccccc--
Confidence            2  2468999999999999999999999996421 1111                            11112222222  


Q ss_pred             cccceecHHHHHHhcCCCCCCChHHHHHHHHHHHHhcc
Q 017760          224 GVTHYFSLLKAKDELCYVPIVSPREGMAATISYWQDRK  261 (366)
Q Consensus       224 ~~~~~~d~~ka~~~LG~~p~~~~~e~l~~~v~~~~~~~  261 (366)
                        ....|++|++++|||+|+++++++|+++++||++.-
T Consensus       297 --~~~~d~~k~~~~lgw~p~~~l~~gi~~~~~~~~~~~  332 (340)
T PLN02653        297 --NLKGDASKAREVLGWKPKVGFEQLVKMMVDEDLELA  332 (340)
T ss_pred             --cccCCHHHHHHHhCCCCCCCHHHHHHHHHHHHHHhc
Confidence              124699999999999999999999999999998643

>PLN02240 UDP-glucose 4-epimerase

Probab=99.91  E-value=1.1e-22  Score=195.66  Aligned_cols=151  Identities=18%  Similarity=0.142  Sum_probs=110.1

Q ss_pred             CCceEEEEeCCccccCCCC-----------CCHHHHHHHHHcCC--CCeeec------CCCcceeceeHHHHHHHHHHHH
Q 017760           71 KCLYTCAVRPAAIYGPGEE-----------RHLPRIVSLAKLGL--VPFKIG------EPSVKTDWIYVDNLVLALILAS  131 (366)
Q Consensus        71 ~~l~~~ilRp~~iyGp~~~-----------~~l~~~i~~~~~g~--~~~~~g------~~~~~~~~v~vdDla~a~~~a~  131 (366)
                      .+++++++|++++||++..           ..+..++..+..++  .+.+.|      ++.+.++|+|++|+|++++.++
T Consensus       175 ~~~~~~~~R~~~v~G~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~g~~~~~~i~v~D~a~a~~~a~  254 (352)
T PLN02240        175 PEWKIILLRYFNPVGAHPSGRIGEDPKGIPNNLMPYVQQVAVGRRPELTVFGNDYPTKDGTGVRDYIHVMDLADGHIAAL  254 (352)
T ss_pred             CCCCEEEEeecCcCCCCccccccCCCCCCcchHHHHHHHHHhCCCCceEEeCCCCCCCCCCEEEeeEEHHHHHHHHHHHH
Confidence            4678999999999997431           11223444455443  233444      6789999999999999999998


Q ss_pred             hccccCCCCCCCCCCCCCccEEecCCCCCCHHHHHHHHHHhcCCCCCccccCHHHHHHHHHHHHHHHHhhhhccccccCC
Q 017760          132 MGLLDDIPGQKGRPIASGQPYFVSDGFPINTFEFIGPLLKTLDYDLPKSWLAVPHALFLGKVFSFFYSVLYPWLNRWWLP  211 (366)
Q Consensus       132 ~~l~~~~~~~~~~~~~~g~~y~I~~~~~vs~~e~~~~l~~~lg~~~~~~~lp~~~~~~~a~~~e~~~~~~~~~~~~~~~~  211 (366)
                      +.+.+       +....+++||+++++++|+.|+++.+.+.+|.+.+....|                           .
T Consensus       255 ~~~~~-------~~~~~~~~yni~~~~~~s~~el~~~i~~~~g~~~~~~~~~---------------------------~  300 (352)
T PLN02240        255 RKLFT-------DPDIGCEAYNLGTGKGTSVLEMVAAFEKASGKKIPLKLAP---------------------------R  300 (352)
T ss_pred             hhhhh-------ccCCCCceEEccCCCcEeHHHHHHHHHHHhCCCCCceeCC---------------------------C
Confidence            75322       1234568999999999999999999999999765533221                           0


Q ss_pred             CCCCcHHhhhhhcccceecHHHHHHhcCCCCCCChHHHHHHHHHHHHhcccc
Q 017760          212 QPLILPAEVYKVGVTHYFSLLKAKDELCYVPIVSPREGMAATISYWQDRKRK  263 (366)
Q Consensus       212 ~p~l~~~ev~~~~~~~~~d~~ka~~~LG~~p~~~~~e~l~~~v~~~~~~~~~  263 (366)
                      .+    .+.    .....|++|++++|||+|+++++++|+++++|+++++..
T Consensus       301 ~~----~~~----~~~~~d~~k~~~~lg~~p~~~l~~~l~~~~~~~~~~~~~  344 (352)
T PLN02240        301 RP----GDA----EEVYASTEKAEKELGWKAKYGIDEMCRDQWNWASKNPYG  344 (352)
T ss_pred             CC----CCh----hhhhcCHHHHHHHhCCCCCCCHHHHHHHHHHHHHhCccc
Confidence            01    011    122468999999999999999999999999999987644

>TIGR01181 dTDP_gluc_dehyt dTDP-glucose 4,6-dehydratase

Probab=99.90  E-value=6e-23  Score=193.86  Aligned_cols=145  Identities=23%  Similarity=0.321  Sum_probs=115.3

Q ss_pred             CCceEEEEeCCccccCCC--CCCHHHHHHHHHcCCCCeeecCCCcceeceeHHHHHHHHHHHHhccccCCCCCCCCCCCC
Q 017760           71 KCLYTCAVRPAAIYGPGE--ERHLPRIVSLAKLGLVPFKIGEPSVKTDWIYVDNLVLALILASMGLLDDIPGQKGRPIAS  148 (366)
Q Consensus        71 ~~l~~~ilRp~~iyGp~~--~~~l~~~i~~~~~g~~~~~~g~~~~~~~~v~vdDla~a~~~a~~~l~~~~~~~~~~~~~~  148 (366)
                      .+++++++||+.+|||+.  ...++.++..+..+..+..++++++.++|+|++|+++++..+++           . ...
T Consensus       168 ~~~~~~i~R~~~i~G~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~i~v~D~a~~~~~~~~-----------~-~~~  235 (317)
T TIGR01181       168 YGLPALITRCSNNYGPYQFPEKLIPLMITNALAGKPLPVYGDGQQVRDWLYVEDHCRAIYLVLE-----------K-GRV  235 (317)
T ss_pred             hCCCeEEEEeccccCCCCCcccHHHHHHHHHhcCCCceEeCCCceEEeeEEHHHHHHHHHHHHc-----------C-CCC
Confidence            467899999999999975  35678888888888877788999999999999999999999986           2 345


Q ss_pred             CccEEecCCCCCCHHHHHHHHHHhcCCCCCccccCHHHHHHHHHHHHHHHHhhhhccccccCCCCCCcHHhhhhhcccce
Q 017760          149 GQPYFVSDGFPINTFEFIGPLLKTLDYDLPKSWLAVPHALFLGKVFSFFYSVLYPWLNRWWLPQPLILPAEVYKVGVTHY  228 (366)
Q Consensus       149 g~~y~I~~~~~vs~~e~~~~l~~~lg~~~~~~~lp~~~~~~~a~~~e~~~~~~~~~~~~~~~~~p~l~~~ev~~~~~~~~  228 (366)
                      +++||+++++++|+.|+++.+.+.+|.+.+....                           ...   .+.+    .....
T Consensus       236 ~~~~~~~~~~~~s~~~~~~~i~~~~~~~~~~~~~---------------------------~~~---~~~~----~~~~~  281 (317)
T TIGR01181       236 GETYNIGGGNERTNLEVVETILELLGKDEDLITH---------------------------VED---RPGH----DRRYA  281 (317)
T ss_pred             CceEEeCCCCceeHHHHHHHHHHHhCCCcccccc---------------------------cCC---Cccc----hhhhc
Confidence            6899999999999999999999999865332110                           000   0001    01124


Q ss_pred             ecHHHHHHhcCCCCCCChHHHHHHHHHHHHhcc
Q 017760          229 FSLLKAKDELCYVPIVSPREGMAATISYWQDRK  261 (366)
Q Consensus       229 ~d~~ka~~~LG~~p~~~~~e~l~~~v~~~~~~~  261 (366)
                      .|++|++++|||+|+++++++++++++||+++.
T Consensus       282 ~~~~k~~~~lG~~p~~~~~~~i~~~~~~~~~~~  314 (317)
T TIGR01181       282 IDASKIKRELGWAPKYTFEEGLRKTVQWYLDNE  314 (317)
T ss_pred             CCHHHHHHHhCCCCCCcHHHHHHHHHHHHHhcc
Confidence            799999999999999999999999999998764

This protein is related to UDP-glucose 4-epimerase (GalE) and likewise has an NAD cofactor.

>PRK10084 dTDP-glucose 4,6 dehydratase; Provisional

Probab=99.90  E-value=7.5e-23  Score=196.85  Aligned_cols=152  Identities=18%  Similarity=0.232  Sum_probs=115.5

Q ss_pred             CCceEEEEeCCccccCCCC--CCHHHHHHHHHcCCCCeeecCCCcceeceeHHHHHHHHHHHHhccccCCCCCCCCCCCC
Q 017760           71 KCLYTCAVRPAAIYGPGEE--RHLPRIVSLAKLGLVPFKIGEPSVKTDWIYVDNLVLALILASMGLLDDIPGQKGRPIAS  148 (366)
Q Consensus        71 ~~l~~~ilRp~~iyGp~~~--~~l~~~i~~~~~g~~~~~~g~~~~~~~~v~vdDla~a~~~a~~~l~~~~~~~~~~~~~~  148 (366)
                      .+++.+++|++.+|||++.  +.++.++..+..+..+.++|++++.++|+||+|+|+++..+++           . ...
T Consensus       185 ~g~~~vilr~~~v~Gp~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~v~v~D~a~a~~~~l~-----------~-~~~  252 (352)
T PRK10084        185 YGLPTIVTNCSNNYGPYHFPEKLIPLVILNALEGKPLPIYGKGDQIRDWLYVEDHARALYKVVT-----------E-GKA  252 (352)
T ss_pred             hCCCEEEEeccceeCCCcCccchHHHHHHHHhcCCCeEEeCCCCeEEeeEEHHHHHHHHHHHHh-----------c-CCC
Confidence            3677999999999999863  5677787878777776778999999999999999999998886           2 235


Q ss_pred             CccEEecCCCCCCHHHHHHHHHHhcCCCCCccccCHHHHHHHHHHHHHHHHhhhhccccccCCCCCCcHHhhhhhcccce
Q 017760          149 GQPYFVSDGFPINTFEFIGPLLKTLDYDLPKSWLAVPHALFLGKVFSFFYSVLYPWLNRWWLPQPLILPAEVYKVGVTHY  228 (366)
Q Consensus       149 g~~y~I~~~~~vs~~e~~~~l~~~lg~~~~~~~lp~~~~~~~a~~~e~~~~~~~~~~~~~~~~~p~l~~~ev~~~~~~~~  228 (366)
                      +++||+++++++|+.|+++.+++.+|...|. ..|...         .+.          +.+..   +..    .....
T Consensus       253 ~~~yni~~~~~~s~~~~~~~i~~~~~~~~p~-~~~~~~---------~~~----------~~~~~---~~~----~~~~~  305 (352)
T PRK10084        253 GETYNIGGHNEKKNLDVVLTICDLLDEIVPK-ATSYRE---------QIT----------YVADR---PGH----DRRYA  305 (352)
T ss_pred             CceEEeCCCCcCcHHHHHHHHHHHhcccccc-ccchhh---------hcc----------ccccC---CCC----Cceee
Confidence            7899999999999999999999999864332 111100         000          00010   001    01225


Q ss_pred             ecHHHHHHhcCCCCCCChHHHHHHHHHHHHhcc
Q 017760          229 FSLLKAKDELCYVPIVSPREGMAATISYWQDRK  261 (366)
Q Consensus       229 ~d~~ka~~~LG~~p~~~~~e~l~~~v~~~~~~~  261 (366)
                      +|++|+++++||+|+++++++|+++++||+++.
T Consensus       306 ~d~~k~~~~lg~~p~~~l~~~l~~~~~~~~~~~  338 (352)
T PRK10084        306 IDASKISRELGWKPQETFESGIRKTVEWYLANT  338 (352)
T ss_pred             eCHHHHHHHcCCCCcCCHHHHHHHHHHHHHhCH
Confidence            799999999999999999999999999998864

>CHL00194 ycf39 Ycf39; Provisional

Probab=99.89  E-value=1.8e-22  Score=191.63  Aligned_cols=221  Identities=14%  Similarity=0.099  Sum_probs=158.8

Q ss_pred             CeEEEEcCCChhHHHHHHHHHHcCCceEEEEecCCCCcccccccCCCeEEEEcc--------------------------
Q 017760           12 KTFLVTGGLGHVGSALCLELVRRGAYQVRAFDLRTNSPWSHLLINHGVHCIQGL--------------------------   65 (366)
Q Consensus        12 ~~VlITGgtGfiG~~L~~~L~~~g~~~V~~~dr~~~~~~~~~~~~~~v~~i~gD--------------------------   65 (366)
                      |+|+|||||||+|++++++|+++| ++|++++|+....  ..+...+++++.+|                          
T Consensus         1 MkIlVtGatG~iG~~lv~~Ll~~g-~~V~~l~R~~~~~--~~l~~~~v~~v~~Dl~d~~~l~~al~g~d~Vi~~~~~~~~   77 (317)
T CHL00194          1 MSLLVIGATGTLGRQIVRQALDEG-YQVRCLVRNLRKA--SFLKEWGAELVYGDLSLPETLPPSFKGVTAIIDASTSRPS   77 (317)
T ss_pred             CEEEEECCCcHHHHHHHHHHHHCC-CeEEEEEcChHHh--hhHhhcCCEEEECCCCCHHHHHHHHCCCCEEEECCCCCCC
Confidence            489999999999999999999999 5999999875322  11122356666666                          


Q ss_pred             ----------------------------------------------------ccCCCCCceEEEEeCCccccCCCCCCHH
Q 017760           66 ----------------------------------------------------RKNNRKCLYTCAVRPAAIYGPGEERHLP   93 (366)
Q Consensus        66 ----------------------------------------------------ks~~~~~l~~~ilRp~~iyGp~~~~~l~   93 (366)
                                                                          +.....+++++++||+.+|+.-    +.
T Consensus        78 ~~~~~~~~~~~~~~~l~~aa~~~gvkr~I~~Ss~~~~~~~~~~~~~~K~~~e~~l~~~~l~~tilRp~~~~~~~----~~  153 (317)
T CHL00194         78 DLYNAKQIDWDGKLALIEAAKAAKIKRFIFFSILNAEQYPYIPLMKLKSDIEQKLKKSGIPYTIFRLAGFFQGL----IS  153 (317)
T ss_pred             CccchhhhhHHHHHHHHHHHHHcCCCEEEEeccccccccCCChHHHHHHHHHHHHHHcCCCeEEEeecHHhhhh----hh
Confidence                                                                0023457899999999998642    22


Q ss_pred             HHHHHHHcCCCCeeecCCCcceeceeHHHHHHHHHHHHhccccCCCCCCCCCCCCCccEEecCCCCCCHHHHHHHHHHhc
Q 017760           94 RIVSLAKLGLVPFKIGEPSVKTDWIYVDNLVLALILASMGLLDDIPGQKGRPIASGQPYFVSDGFPINTFEFIGPLLKTL  173 (366)
Q Consensus        94 ~~i~~~~~g~~~~~~g~~~~~~~~v~vdDla~a~~~a~~~l~~~~~~~~~~~~~~g~~y~I~~~~~vs~~e~~~~l~~~l  173 (366)
                      .....+..+.. ...+++++.++|+|++|+|+++..+++           .+...+++||+++++++|+.|+++.+.+.+
T Consensus       154 ~~~~~~~~~~~-~~~~~~~~~~~~i~v~Dva~~~~~~l~-----------~~~~~~~~~ni~g~~~~s~~el~~~~~~~~  221 (317)
T CHL00194        154 QYAIPILEKQP-IWITNESTPISYIDTQDAAKFCLKSLS-----------LPETKNKTFPLVGPKSWNSSEIISLCEQLS  221 (317)
T ss_pred             hhhhhhccCCc-eEecCCCCccCccCHHHHHHHHHHHhc-----------CccccCcEEEecCCCccCHHHHHHHHHHHh
Confidence            22222233443 334556677899999999999999986           445568999999999999999999999999


Q ss_pred             CCCCCccccCHHHHHHHHHHHHHHHHhhhhccccccCCCCCCcHHhhhhhcccceecHHHHHHhcCCCCC--CChHHHHH
Q 017760          174 DYDLPKSWLAVPHALFLGKVFSFFYSVLYPWLNRWWLPQPLILPAEVYKVGVTHYFSLLKAKDELCYVPI--VSPREGMA  251 (366)
Q Consensus       174 g~~~~~~~lp~~~~~~~a~~~e~~~~~~~~~~~~~~~~~p~l~~~ev~~~~~~~~~d~~ka~~~LG~~p~--~~~~e~l~  251 (366)
                      |.+.+...+|.+...+.+.+.+.+.....        ....+...++...+.+..++.+++++.||+.|.  .+++++++
T Consensus       222 g~~~~~~~vp~~~~~~~~~~~~~~~~~~~--------~~~~l~~~~~~~~~~~~~~~~~~~~~~~g~~p~~~~~~~~~~~  293 (317)
T CHL00194        222 GQKAKISRVPLFLLKLLRQITGFFEWTWN--------ISDRLAFVEILNTSNNFSSSMAELYKIFKIDPNELISLEDYFQ  293 (317)
T ss_pred             CCCCeEEeCCHHHHHHHHHHHhhcccchh--------hHHHHHHHHHHhcCCCcCCCHHHHHHHhCCChhhhhhHHHHHH
Confidence            99888888999998888777664421000        122233334444444456788899999999984  47888888


Q ss_pred             HHHHHHHh
Q 017760          252 ATISYWQD  259 (366)
Q Consensus       252 ~~v~~~~~  259 (366)
                      ++++-.++
T Consensus       294 ~~~~~~~~  301 (317)
T CHL00194        294 EYFERILK  301 (317)
T ss_pred             HHHHHHHH
Confidence            87765443

>PLN02214 cinnamoyl-CoA reductase

Probab=99.88  E-value=8.6e-22  Score=188.95  Aligned_cols=201  Identities=19%  Similarity=0.210  Sum_probs=138.7

Q ss_pred             ccCCeEEEEcCCChhHHHHHHHHHHcCCceEEEEecCCCCccc---cccc--CCCeEEEEcc------------------
Q 017760            9 IEGKTFLVTGGLGHVGSALCLELVRRGAYQVRAFDLRTNSPWS---HLLI--NHGVHCIQGL------------------   65 (366)
Q Consensus         9 ~~~~~VlITGgtGfiG~~L~~~L~~~g~~~V~~~dr~~~~~~~---~~~~--~~~v~~i~gD------------------   65 (366)
                      .++++|+||||+||+|++++++|+++| ++|++++|+......   ..+.  ..+++++.+|                  
T Consensus         8 ~~~~~vlVTGatGfIG~~l~~~L~~~G-~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~Dl~d~~~~~~~~~~~d~Vi   86 (342)
T PLN02214          8 PAGKTVCVTGAGGYIASWIVKILLERG-YTVKGTVRNPDDPKNTHLRELEGGKERLILCKADLQDYEALKAAIDGCDGVF   86 (342)
T ss_pred             CCCCEEEEECCCcHHHHHHHHHHHHCc-CEEEEEeCCchhhhHHHHHHhhCCCCcEEEEecCcCChHHHHHHHhcCCEEE
Confidence            346789999999999999999999999 599999987543110   0111  1346677777                  


Q ss_pred             -----------------------------------------------cc-------------------------------
Q 017760           66 -----------------------------------------------RK-------------------------------   67 (366)
Q Consensus        66 -----------------------------------------------ks-------------------------------   67 (366)
                                                                     ..                               
T Consensus        87 h~A~~~~~~~~~~~~~nv~gt~~ll~aa~~~~v~r~V~~SS~~avyg~~~~~~~~~~~E~~~~~~~~~~~p~~~Y~~sK~  166 (342)
T PLN02214         87 HTASPVTDDPEQMVEPAVNGAKFVINAAAEAKVKRVVITSSIGAVYMDPNRDPEAVVDESCWSDLDFCKNTKNWYCYGKM  166 (342)
T ss_pred             EecCCCCCCHHHHHHHHHHHHHHHHHHHHhcCCCEEEEeccceeeeccCCCCCCcccCcccCCChhhccccccHHHHHHH
Confidence                                                           00                               


Q ss_pred             ---------CCCCCceEEEEeCCccccCCCCCC----HHHHHHHHHcCCCCeeecCCCcceeceeHHHHHHHHHHHHhcc
Q 017760           68 ---------NNRKCLYTCAVRPAAIYGPGEERH----LPRIVSLAKLGLVPFKIGEPSVKTDWIYVDNLVLALILASMGL  134 (366)
Q Consensus        68 ---------~~~~~l~~~ilRp~~iyGp~~~~~----l~~~i~~~~~g~~~~~~g~~~~~~~~v~vdDla~a~~~a~~~l  134 (366)
                               ....+++++++||++||||++...    +..++. +..|.... .+  +..++|+||+|+|++++++++  
T Consensus       167 ~aE~~~~~~~~~~g~~~v~lRp~~vyGp~~~~~~~~~~~~~~~-~~~g~~~~-~~--~~~~~~i~V~Dva~a~~~al~--  240 (342)
T PLN02214        167 VAEQAAWETAKEKGVDLVVLNPVLVLGPPLQPTINASLYHVLK-YLTGSAKT-YA--NLTQAYVDVRDVALAHVLVYE--  240 (342)
T ss_pred             HHHHHHHHHHHHcCCcEEEEeCCceECCCCCCCCCchHHHHHH-HHcCCccc-CC--CCCcCeeEHHHHHHHHHHHHh--
Confidence                     112367899999999999986422    233333 33454432 33  456899999999999999997  


Q ss_pred             ccCCCCCCCCCCCCCccEEecCCCCCCHHHHHHHHHHhcCCCCCccccCHHHHHHHHHHHHHHHHhhhhccccccCCCCC
Q 017760          135 LDDIPGQKGRPIASGQPYFVSDGFPINTFEFIGPLLKTLDYDLPKSWLAVPHALFLGKVFSFFYSVLYPWLNRWWLPQPL  214 (366)
Q Consensus       135 ~~~~~~~~~~~~~~g~~y~I~~~~~vs~~e~~~~l~~~lg~~~~~~~lp~~~~~~~a~~~e~~~~~~~~~~~~~~~~~p~  214 (366)
                               .+. .++.||+++ .+.++.|+++.+.+.++..    .+|...                         .+.
T Consensus       241 ---------~~~-~~g~yn~~~-~~~~~~el~~~i~~~~~~~----~~~~~~-------------------------~~~  280 (342)
T PLN02214        241 ---------APS-ASGRYLLAE-SARHRGEVVEILAKLFPEY----PLPTKC-------------------------KDE  280 (342)
T ss_pred             ---------Ccc-cCCcEEEec-CCCCHHHHHHHHHHHCCCC----CCCCCC-------------------------ccc
Confidence                     322 345899987 4689999999999998621    111100                         000


Q ss_pred             CcHHhhhhhcccceecHHHHHHhcCCCCCCChHHHHHHHHHHHHhcccc
Q 017760          215 ILPAEVYKVGVTHYFSLLKAKDELCYVPIVSPREGMAATISYWQDRKRK  263 (366)
Q Consensus       215 l~~~ev~~~~~~~~~d~~ka~~~LG~~p~~~~~e~l~~~v~~~~~~~~~  263 (366)
                      ..+ .    .....+|++|++ +|||+|. +++|+|+++++|+++.+.-
T Consensus       281 ~~~-~----~~~~~~d~~k~~-~LG~~p~-~lee~i~~~~~~~~~~~~~  322 (342)
T PLN02214        281 KNP-R----AKPYKFTNQKIK-DLGLEFT-STKQSLYDTVKSLQEKGHL  322 (342)
T ss_pred             cCC-C----CCccccCcHHHH-HcCCccc-CHHHHHHHHHHHHHHcCCC
Confidence            000 0    112258999998 5999994 9999999999999887644

>PRK10675 UDP-galactose-4-epimerase; Provisional

Probab=99.88  E-value=2.2e-21  Score=185.47  Aligned_cols=146  Identities=14%  Similarity=0.097  Sum_probs=104.3

Q ss_pred             CceEEEEeCCccccCCC--------CC----CHHHHHHHHHcC-CC-Ceeec------CCCcceeceeHHHHHHHHHHHH
Q 017760           72 CLYTCAVRPAAIYGPGE--------ER----HLPRIVSLAKLG-LV-PFKIG------EPSVKTDWIYVDNLVLALILAS  131 (366)
Q Consensus        72 ~l~~~ilRp~~iyGp~~--------~~----~l~~~i~~~~~g-~~-~~~~g------~~~~~~~~v~vdDla~a~~~a~  131 (366)
                      +++++++|++.+||+..        ..    +++.+ ..+..+ .. +.+.|      ++++.++|+|++|+|++++.++
T Consensus       169 ~~~~~ilR~~~v~g~~~~~~~g~~~~~~~~~~~~~~-~~~~~~~~~~~~~~~~~~~~~~g~~~~~~v~v~D~a~~~~~~~  247 (338)
T PRK10675        169 DWSIALLRYFNPVGAHPSGDMGEDPQGIPNNLMPYI-AQVAVGRRDSLAIFGNDYPTEDGTGVRDYIHVMDLADGHVAAM  247 (338)
T ss_pred             CCcEEEEEeeeecCCCcccccccCCCCChhHHHHHH-HHHHhcCCCceEEeCCcCCCCCCcEEEeeEEHHHHHHHHHHHH
Confidence            67899999999998742        11    22333 333333 22 23333      5678899999999999999998


Q ss_pred             hccccCCCCCCCCCCCCCccEEecCCCCCCHHHHHHHHHHhcCCCCCccccCHHHHHHHHHHHHHHHHhhhhccccccCC
Q 017760          132 MGLLDDIPGQKGRPIASGQPYFVSDGFPINTFEFIGPLLKTLDYDLPKSWLAVPHALFLGKVFSFFYSVLYPWLNRWWLP  211 (366)
Q Consensus       132 ~~l~~~~~~~~~~~~~~g~~y~I~~~~~vs~~e~~~~l~~~lg~~~~~~~lp~~~~~~~a~~~e~~~~~~~~~~~~~~~~  211 (366)
                      +..         .....+++||+++++++|+.|+++.+.+.+|.+.+....|                            
T Consensus       248 ~~~---------~~~~~~~~~ni~~~~~~s~~e~~~~i~~~~g~~~~~~~~~----------------------------  290 (338)
T PRK10675        248 EKL---------ANKPGVHIYNLGAGVGSSVLDVVNAFSKACGKPVNYHFAP----------------------------  290 (338)
T ss_pred             Hhh---------hccCCCceEEecCCCceeHHHHHHHHHHHhCCCCCeeeCC----------------------------
Confidence            631         1123457999999999999999999999999765432211                            


Q ss_pred             CCCCcHHhhhhhcccceecHHHHHHhcCCCCCCChHHHHHHHHHHHHhccc
Q 017760          212 QPLILPAEVYKVGVTHYFSLLKAKDELCYVPIVSPREGMAATISYWQDRKR  262 (366)
Q Consensus       212 ~p~l~~~ev~~~~~~~~~d~~ka~~~LG~~p~~~~~e~l~~~v~~~~~~~~  262 (366)
                        . .+.+.    .....|++|+++++||+|+++++++++++++|++++..
T Consensus       291 --~-~~~~~----~~~~~~~~k~~~~lg~~p~~~~~~~~~~~~~~~~~~~~  334 (338)
T PRK10675        291 --R-REGDL----PAYWADASKADRELNWRVTRTLDEMAQDTWHWQSRHPQ  334 (338)
T ss_pred             --C-CCCch----hhhhcCHHHHHHHhCCCCcCcHHHHHHHHHHHHHhhhh
Confidence              0 00011    11247999999999999999999999999999988643

>TIGR02197 heptose_epim ADP-L-glycero-D-manno-heptose-6-epimerase

Probab=99.88  E-value=1.9e-21  Score=183.82  Aligned_cols=144  Identities=16%  Similarity=0.181  Sum_probs=109.6

Q ss_pred             CCceEEEEeCCccccCCCC------CCHHHHHHHHHcCCCCeee------cCCCcceeceeHHHHHHHHHHHHhccccCC
Q 017760           71 KCLYTCAVRPAAIYGPGEE------RHLPRIVSLAKLGLVPFKI------GEPSVKTDWIYVDNLVLALILASMGLLDDI  138 (366)
Q Consensus        71 ~~l~~~ilRp~~iyGp~~~------~~l~~~i~~~~~g~~~~~~------g~~~~~~~~v~vdDla~a~~~a~~~l~~~~  138 (366)
                      .+++++++||+++|||++.      ..+..++..+.++..+.++      +++++.++|+|++|+++++..+++      
T Consensus       158 ~~~~~~~lR~~~vyG~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~i~v~D~a~~i~~~~~------  231 (314)
T TIGR02197       158 LSAQVVGLRYFNVYGPREYHKGKMASVAFHLFNQIKAGGNVKLFKSSEGFKDGEQLRDFVYVKDVVDVNLWLLE------  231 (314)
T ss_pred             cCCceEEEEEeeccCCCCCCCCCcccHHHHHHHHHhcCCCeEEecCccccCCCCceeeeEEHHHHHHHHHHHHh------
Confidence            3568999999999999863      3456677777777765554      467788999999999999999996      


Q ss_pred             CCCCCCCCCCCccEEecCCCCCCHHHHHHHHHHhcCCCCCccccCHHHHHHHHHHHHHHHHhhhhccccccCCCCCCcHH
Q 017760          139 PGQKGRPIASGQPYFVSDGFPINTFEFIGPLLKTLDYDLPKSWLAVPHALFLGKVFSFFYSVLYPWLNRWWLPQPLILPA  218 (366)
Q Consensus       139 ~~~~~~~~~~g~~y~I~~~~~vs~~e~~~~l~~~lg~~~~~~~lp~~~~~~~a~~~e~~~~~~~~~~~~~~~~~p~l~~~  218 (366)
                           .  ..+++||+++++++|+.|+++.+.+.+|.+.+....|.+                          .....  
T Consensus       232 -----~--~~~~~yni~~~~~~s~~e~~~~i~~~~g~~~~~~~~~~~--------------------------~~~~~--  276 (314)
T TIGR02197       232 -----N--GVSGIFNLGTGRARSFNDLADAVFKALGKDEKIEYIPMP--------------------------EALRG--  276 (314)
T ss_pred             -----c--ccCceEEcCCCCCccHHHHHHHHHHHhCCCCcceeccCc--------------------------ccccc--
Confidence                 3  345699999999999999999999999976432222211                          10000  


Q ss_pred             hhhhhcccceecHHHHHHhcCCCCCCChHHHHHHHHHHHH
Q 017760          219 EVYKVGVTHYFSLLKAKDELCYVPIVSPREGMAATISYWQ  258 (366)
Q Consensus       219 ev~~~~~~~~~d~~ka~~~LG~~p~~~~~e~l~~~v~~~~  258 (366)
                         ........|++|+++++||+|+++++++++++++|++
T Consensus       277 ---~~~~~~~~~~~k~~~~l~~~p~~~l~~~l~~~~~~~~  313 (314)
T TIGR02197       277 ---KYQYFTQADITKLRAAGYYGPFTTLEEGVKDYVQWLL  313 (314)
T ss_pred             ---ccccccccchHHHHHhcCCCCcccHHHHHHHHHHHHh
Confidence               0011124799999999999999999999999999985

This family consists of examples of ADP-L-glycero-D-mannoheptose-6-epimerase, an enzyme involved in biosynthesis of the inner core of lipopolysaccharide (LPS) for Gram-negative bacteria. This enzyme is homologous to UDP-glucose 4-epimerase (TIGR01179) and belongs to the NAD dependent epimerase/dehydratase family (pfam01370).

>COG0451 WcaG Nucleoside-diphosphate-sugar epimerases [Cell envelope biogenesis, outer membrane / Carbohydrate transport and metabolism]

Probab=99.87  E-value=3.6e-21  Score=181.57  Aligned_cols=144  Identities=24%  Similarity=0.387  Sum_probs=112.4

Q ss_pred             CceEEEEeCCccccCCCCC-----CHHHHHHHHHcCCC-CeeecCCCcceeceeHHHHHHHHHHHHhccccCCCCCCCCC
Q 017760           72 CLYTCAVRPAAIYGPGEER-----HLPRIVSLAKLGLV-PFKIGEPSVKTDWIYVDNLVLALILASMGLLDDIPGQKGRP  145 (366)
Q Consensus        72 ~l~~~ilRp~~iyGp~~~~-----~l~~~i~~~~~g~~-~~~~g~~~~~~~~v~vdDla~a~~~a~~~l~~~~~~~~~~~  145 (366)
                      +++++++||+++|||++..     ....++..+..+.. ....++++..++++|++|++++++.++++           +
T Consensus       161 ~~~~~ilR~~~vyGp~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~v~D~a~~~~~~~~~-----------~  229 (314)
T COG0451         161 GLPVVILRPFNVYGPGDKPDLSSGVVSAFIRQLLKGEPIIVIGGDGSQTRDFVYVDDVADALLLALEN-----------P  229 (314)
T ss_pred             CCCeEEEeeeeeeCCCCCCCCCcCcHHHHHHHHHhCCCcceEeCCCceeEeeEeHHHHHHHHHHHHhC-----------C
Confidence            5899999999999999864     34445555677775 55567888889999999999999999973           2


Q ss_pred             CCCCccEEecCCC-CCCHHHHHHHHHHhcCCCCCc-cccCHHHHHHHHHHHHHHHHhhhhccccccCCCCCCcHHhhhhh
Q 017760          146 IASGQPYFVSDGF-PINTFEFIGPLLKTLDYDLPK-SWLAVPHALFLGKVFSFFYSVLYPWLNRWWLPQPLILPAEVYKV  223 (366)
Q Consensus       146 ~~~g~~y~I~~~~-~vs~~e~~~~l~~~lg~~~~~-~~lp~~~~~~~a~~~e~~~~~~~~~~~~~~~~~p~l~~~ev~~~  223 (366)
                      . .+ .||++++. +.++.|+++.+.+.+|.+.+. ...                            +.     ......
T Consensus       230 ~-~~-~~ni~~~~~~~~~~e~~~~~~~~~~~~~~~~~~~----------------------------~~-----~~~~~~  274 (314)
T COG0451         230 D-GG-VFNIGSGTAEITVRELAEAVAEAVGSKAPLIVYI----------------------------PL-----GRRGDL  274 (314)
T ss_pred             C-Cc-EEEeCCCCCcEEHHHHHHHHHHHhCCCCcceeec----------------------------CC-----CCCCcc
Confidence            2 23 99999997 899999999999999987652 111                            10     111222


Q ss_pred             cccceecHHHHHHhcCCCCCCChHHHHHHHHHHHHhcc
Q 017760          224 GVTHYFSLLKAKDELCYVPIVSPREGMAATISYWQDRK  261 (366)
Q Consensus       224 ~~~~~~d~~ka~~~LG~~p~~~~~e~l~~~v~~~~~~~  261 (366)
                      .....+|++|+++++||+|.+++++++.++++|+....
T Consensus       275 ~~~~~~~~~~~~~~lg~~p~~~~~~~i~~~~~~~~~~~  312 (314)
T COG0451         275 REGKLLDISKARAALGWEPKVSLEEGLADTLEWLLKKL  312 (314)
T ss_pred             cccccCCHHHHHHHhCCCCCCCHHHHHHHHHHHHHHhh
Confidence            33446899999999999999999999999999997654

>PLN00198 anthocyanidin reductase; Provisional

Probab=99.87  E-value=2.7e-21  Score=185.07  Aligned_cols=141  Identities=14%  Similarity=0.093  Sum_probs=96.5

Q ss_pred             CCceEEEEeCCccccCCCCCCHHH---HHHHHHcCCCCeeec-CCC----cceeceeHHHHHHHHHHHHhccccCCCCCC
Q 017760           71 KCLYTCAVRPAAIYGPGEERHLPR---IVSLAKLGLVPFKIG-EPS----VKTDWIYVDNLVLALILASMGLLDDIPGQK  142 (366)
Q Consensus        71 ~~l~~~ilRp~~iyGp~~~~~l~~---~i~~~~~g~~~~~~g-~~~----~~~~~v~vdDla~a~~~a~~~l~~~~~~~~  142 (366)
                      .+++++++||++||||++....+.   ++..+.+++...+.| ++.    ..++|+||+|+|++++.+++          
T Consensus       186 ~~~~~~~~R~~~vyGp~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~i~V~D~a~a~~~~~~----------  255 (338)
T PLN00198        186 NNIDLITVIPTLMAGPSLTSDIPSSLSLAMSLITGNEFLINGLKGMQMLSGSISITHVEDVCRAHIFLAE----------  255 (338)
T ss_pred             cCceEEEEeCCceECCCccCCCCCcHHHHHHHHcCCccccccccccccccCCcceeEHHHHHHHHHHHhh----------
Confidence            367899999999999986432222   233455565544444 222    23799999999999999986          


Q ss_pred             CCCCCCCccEEecCCCCCCHHHHHHHHHHhcCCCCCccccCHHHHHHHHHHHHHHHHhhhhccccccCCCCCCcHHhhhh
Q 017760          143 GRPIASGQPYFVSDGFPINTFEFIGPLLKTLDYDLPKSWLAVPHALFLGKVFSFFYSVLYPWLNRWWLPQPLILPAEVYK  222 (366)
Q Consensus       143 ~~~~~~g~~y~I~~~~~vs~~e~~~~l~~~lg~~~~~~~lp~~~~~~~a~~~e~~~~~~~~~~~~~~~~~p~l~~~ev~~  222 (366)
                       ... .++.| ++++.++|+.|+++.+.+.++...    +|....                       ..+.        
T Consensus       256 -~~~-~~~~~-~~~~~~~s~~el~~~i~~~~~~~~----~~~~~~-----------------------~~~~--------  297 (338)
T PLN00198        256 -KES-ASGRY-ICCAANTSVPELAKFLIKRYPQYQ----VPTDFG-----------------------DFPS--------  297 (338)
T ss_pred             -CcC-cCCcE-EEecCCCCHHHHHHHHHHHCCCCC----CCcccc-----------------------ccCC--------
Confidence             222 23467 455677999999999998886321    111000                       1110        


Q ss_pred             hcccceecHHHHHHhcCCCCCCChHHHHHHHHHHHHhcc
Q 017760          223 VGVTHYFSLLKAKDELCYVPIVSPREGMAATISYWQDRK  261 (366)
Q Consensus       223 ~~~~~~~d~~ka~~~LG~~p~~~~~e~l~~~v~~~~~~~  261 (366)
                       ......|++|+++ +||+|+++++++|+++++||++++
T Consensus       298 -~~~~~~~~~k~~~-~G~~p~~~l~~gi~~~~~~~~~~~  334 (338)
T PLN00198        298 -KAKLIISSEKLIS-EGFSFEYGIEEIYDQTVEYFKAKG  334 (338)
T ss_pred             -CCccccChHHHHh-CCceecCcHHHHHHHHHHHHHHcC
Confidence             0122478999988 599999999999999999998754

>PRK05865 hypothetical protein; Provisional

Probab=99.87  E-value=3e-21  Score=200.97  Aligned_cols=197  Identities=17%  Similarity=0.137  Sum_probs=137.0

Q ss_pred             CeEEEEcCCChhHHHHHHHHHHcCCceEEEEecCCCCcccccccCCCeEEEEcc--------------------------
Q 017760           12 KTFLVTGGLGHVGSALCLELVRRGAYQVRAFDLRTNSPWSHLLINHGVHCIQGL--------------------------   65 (366)
Q Consensus        12 ~~VlITGgtGfiG~~L~~~L~~~g~~~V~~~dr~~~~~~~~~~~~~~v~~i~gD--------------------------   65 (366)
                      |+|+||||+||+|+++++.|+++| ++|++++++.+...     ..+++++++|                          
T Consensus         1 MkILVTGATGfIGs~La~~Ll~~G-~~Vv~l~R~~~~~~-----~~~v~~v~gDL~D~~~l~~al~~vD~VVHlAa~~~~   74 (854)
T PRK05865          1 MRIAVTGASGVLGRGLTARLLSQG-HEVVGIARHRPDSW-----PSSADFIAADIRDATAVESAMTGADVVAHCAWVRGR   74 (854)
T ss_pred             CEEEEECCCCHHHHHHHHHHHHCc-CEEEEEECCchhhc-----ccCceEEEeeCCCHHHHHHHHhCCCEEEECCCcccc
Confidence            479999999999999999999999 59999998743211     1234555555                          


Q ss_pred             -----------------c-------------------cCCCCCceEEEEeCCccccCCCCCCHHHHHHHHHcCCCCeeec
Q 017760           66 -----------------R-------------------KNNRKCLYTCAVRPAAIYGPGEERHLPRIVSLAKLGLVPFKIG  109 (366)
Q Consensus        66 -----------------k-------------------s~~~~~l~~~ilRp~~iyGp~~~~~l~~~i~~~~~g~~~~~~g  109 (366)
                                       +                   .....+++++++||+++|||+..    .++..+.. ......|
T Consensus        75 ~~~vNv~GT~nLLeAa~~~gvkr~V~iSS~~K~aaE~ll~~~gl~~vILRp~~VYGP~~~----~~i~~ll~-~~v~~~G  149 (854)
T PRK05865         75 NDHINIDGTANVLKAMAETGTGRIVFTSSGHQPRVEQMLADCGLEWVAVRCALIFGRNVD----NWVQRLFA-LPVLPAG  149 (854)
T ss_pred             hHHHHHHHHHHHHHHHHHcCCCeEEEECCcHHHHHHHHHHHcCCCEEEEEeceEeCCChH----HHHHHHhc-CceeccC
Confidence                             0                   01245899999999999999732    23333322 2223335


Q ss_pred             CCCcceeceeHHHHHHHHHHHHhccccCCCCCCCCCCCCCccEEecCCCCCCHHHHHHHHHHhcCCCCCccccCHHHHHH
Q 017760          110 EPSVKTDWIYVDNLVLALILASMGLLDDIPGQKGRPIASGQPYFVSDGFPINTFEFIGPLLKTLDYDLPKSWLAVPHALF  189 (366)
Q Consensus       110 ~~~~~~~~v~vdDla~a~~~a~~~l~~~~~~~~~~~~~~g~~y~I~~~~~vs~~e~~~~l~~~lg~~~~~~~lp~~~~~~  189 (366)
                      +++..++|+|++|+|+++..+++           .+...+++||+++++++|+.|+++.+.+...      .++.+....
T Consensus       150 ~~~~~~dfIhVdDVA~Ai~~aL~-----------~~~~~ggvyNIgsg~~~Si~EIae~l~~~~~------~v~~~~~~~  212 (854)
T PRK05865        150 YADRVVQVVHSDDAQRLLVRALL-----------DTVIDSGPVNLAAPGELTFRRIAAALGRPMV------PIGSPVLRR  212 (854)
T ss_pred             CCCceEeeeeHHHHHHHHHHHHh-----------CCCcCCCeEEEECCCcccHHHHHHHHhhhhc------cCCchhhhh
Confidence            55667799999999999999986           2333467999999999999999998876431      111111000


Q ss_pred             HHHHHHHHHHhhhhccccccCCCCCCcHHhhhhhcccceecHHHHHHhcCCCCCCChHHHHHHHHHHHHhc
Q 017760          190 LGKVFSFFYSVLYPWLNRWWLPQPLILPAEVYKVGVTHYFSLLKAKDELCYVPIVSPREGMAATISYWQDR  260 (366)
Q Consensus       190 ~a~~~e~~~~~~~~~~~~~~~~~p~l~~~ev~~~~~~~~~d~~ka~~~LG~~p~~~~~e~l~~~v~~~~~~  260 (366)
                                 .         .    ...+..........|++|++++|||+|+++++++|+++++||+.+
T Consensus       213 -----------~---------~----~~~~~~~~~~~~~~D~sKar~~LGw~P~~sLeeGL~dti~~~r~r  259 (854)
T PRK05865        213 -----------V---------T----SFAELELLHSAPLMDVTLLRDRWGFQPAWNAEECLEDFTLAVRGR  259 (854)
T ss_pred             -----------c---------c----chhhhhcccCCccCCHHHHHHHhCCCCCCCHHHHHHHHHHHHHhh
Confidence                       0         0    001111111122579999999999999999999999999999864

>PLN02989 cinnamyl-alcohol dehydrogenase family protein

Probab=99.87  E-value=8.8e-21  Score=180.48  Aligned_cols=137  Identities=16%  Similarity=0.212  Sum_probs=98.3

Q ss_pred             CceEEEEeCCccccCCCCC---CHHHHHHHHHcCCCCeeecCCCcceeceeHHHHHHHHHHHHhccccCCCCCCCCCCCC
Q 017760           72 CLYTCAVRPAAIYGPGEER---HLPRIVSLAKLGLVPFKIGEPSVKTDWIYVDNLVLALILASMGLLDDIPGQKGRPIAS  148 (366)
Q Consensus        72 ~l~~~ilRp~~iyGp~~~~---~l~~~i~~~~~g~~~~~~g~~~~~~~~v~vdDla~a~~~a~~~l~~~~~~~~~~~~~~  148 (366)
                      +++++++||+++|||+...   +...++..+.+|+.+.  +  ...++|+||+|+|++++.+++           .+. .
T Consensus       183 ~~~~~ilR~~~vyGp~~~~~~~~~~~~i~~~~~~~~~~--~--~~~r~~i~v~Dva~a~~~~l~-----------~~~-~  246 (325)
T PLN02989        183 EIDLIVLNPGLVTGPILQPTLNFSVAVIVELMKGKNPF--N--TTHHRFVDVRDVALAHVKALE-----------TPS-A  246 (325)
T ss_pred             CCeEEEEcCCceeCCCCCCCCCchHHHHHHHHcCCCCC--C--CcCcCeeEHHHHHHHHHHHhc-----------Ccc-c
Confidence            6789999999999998643   4445565666665432  2  345799999999999999986           222 2


Q ss_pred             CccEEecCCCCCCHHHHHHHHHHhcCCCCCccccCHHHHHHHHHHHHHHHHhhhhccccccCCCCCCcHHhhhhhc-ccc
Q 017760          149 GQPYFVSDGFPINTFEFIGPLLKTLDYDLPKSWLAVPHALFLGKVFSFFYSVLYPWLNRWWLPQPLILPAEVYKVG-VTH  227 (366)
Q Consensus       149 g~~y~I~~~~~vs~~e~~~~l~~~lg~~~~~~~lp~~~~~~~a~~~e~~~~~~~~~~~~~~~~~p~l~~~ev~~~~-~~~  227 (366)
                      ++.||++ +.++|+.|+++.+.+.++.. .   ++                           ..+    .+..... ...
T Consensus       247 ~~~~ni~-~~~~s~~ei~~~i~~~~~~~-~---~~---------------------------~~~----~~~~~~~~~~~  290 (325)
T PLN02989        247 NGRYIID-GPVVTIKDIENVLREFFPDL-C---IA---------------------------DRN----EDITELNSVTF  290 (325)
T ss_pred             CceEEEe-cCCCCHHHHHHHHHHHCCCC-C---CC---------------------------CCC----CCcccccccCc
Confidence            4589995 55899999999999999732 1   10                           000    0110001 122


Q ss_pred             eecHHHHHHhcCCCCCCChHHHHHHHHHHHHhcc
Q 017760          228 YFSLLKAKDELCYVPIVSPREGMAATISYWQDRK  261 (366)
Q Consensus       228 ~~d~~ka~~~LG~~p~~~~~e~l~~~v~~~~~~~  261 (366)
                      ..|++|+++ |||.|.++++++|+++++|+++.+
T Consensus       291 ~~~~~k~~~-lg~~p~~~l~~gi~~~~~~~~~~~  323 (325)
T PLN02989        291 NVCLDKVKS-LGIIEFTPTETSLRDTVLSLKEKC  323 (325)
T ss_pred             CCCHHHHHH-cCCCCCCCHHHHHHHHHHHHHHhC
Confidence            568999886 999999999999999999997654

>PRK09987 dTDP-4-dehydrorhamnose reductase; Provisional

Probab=99.86  E-value=4.9e-21  Score=180.37  Aligned_cols=143  Identities=13%  Similarity=0.123  Sum_probs=103.7

Q ss_pred             CceEEEEeCCccccCCCCCCHHHHHHHHHcCCCCeeecC--CCcceeceeHHHHHHHHHHHHhccccCCCCCCCCCCCCC
Q 017760           72 CLYTCAVRPAAIYGPGEERHLPRIVSLAKLGLVPFKIGE--PSVKTDWIYVDNLVLALILASMGLLDDIPGQKGRPIASG  149 (366)
Q Consensus        72 ~l~~~ilRp~~iyGp~~~~~l~~~i~~~~~g~~~~~~g~--~~~~~~~v~vdDla~a~~~a~~~l~~~~~~~~~~~~~~g  149 (366)
                      ..+++++||+++|||+.+++++.+++.+.+++.+.++++  +...+++.++||+++++..+++           .+ ..+
T Consensus       143 ~~~~~ilR~~~vyGp~~~~~~~~~~~~~~~~~~~~v~~d~~g~~~~~~~~~d~~~~~~~~~~~-----------~~-~~~  210 (299)
T PRK09987        143 CAKHLIFRTSWVYAGKGNNFAKTMLRLAKEREELSVINDQFGAPTGAELLADCTAHAIRVALN-----------KP-EVA  210 (299)
T ss_pred             CCCEEEEecceecCCCCCCHHHHHHHHHhcCCCeEEeCCCcCCCCCHHHHHHHHHHHHHHhhc-----------cC-CCC
Confidence            345899999999999887788888988888888788887  5666667778888888887774           22 224


Q ss_pred             ccEEecCCCCCCHHHHHHHHHHhc---CCCCC---ccccCHHHHHHHHHHHHHHHHhhhhccccccCCCCCCcHHhhhhh
Q 017760          150 QPYFVSDGFPINTFEFIGPLLKTL---DYDLP---KSWLAVPHALFLGKVFSFFYSVLYPWLNRWWLPQPLILPAEVYKV  223 (366)
Q Consensus       150 ~~y~I~~~~~vs~~e~~~~l~~~l---g~~~~---~~~lp~~~~~~~a~~~e~~~~~~~~~~~~~~~~~p~l~~~ev~~~  223 (366)
                      ++||+++++++|+.|+++.+.+.+   |.+.+   ...+|....                       +.+.-.|      
T Consensus       211 giyni~~~~~~s~~e~~~~i~~~~~~~g~~~~~~~i~~~~~~~~-----------------------~~~~~rp------  261 (299)
T PRK09987        211 GLYHLVASGTTTWHDYAALVFEEARKAGITLALNKLNAVPTSAY-----------------------PTPARRP------  261 (299)
T ss_pred             CeEEeeCCCCccHHHHHHHHHHHHHhcCCCcCcCeeeecchhhc-----------------------CCCCCCC------
Confidence            599999999999999999998864   33321   111111100                       1111111      


Q ss_pred             cccceecHHHHHHhcCCCCCCChHHHHHHHHHHH
Q 017760          224 GVTHYFSLLKAKDELCYVPIVSPREGMAATISYW  257 (366)
Q Consensus       224 ~~~~~~d~~ka~~~LG~~p~~~~~e~l~~~v~~~  257 (366)
                       .+...|++|+++.+||+|. +++++|+++++.+
T Consensus       262 -~~~~ld~~k~~~~lg~~~~-~~~~~l~~~~~~~  293 (299)
T PRK09987        262 -HNSRLNTEKFQQNFALVLP-DWQVGVKRMLTEL  293 (299)
T ss_pred             -CcccCCHHHHHHHhCCCCc-cHHHHHHHHHHHH
Confidence             1226899999999999986 9999999999754

>PLN02662 cinnamyl-alcohol dehydrogenase family protein

Probab=99.86  E-value=1.8e-20  Score=177.93  Aligned_cols=137  Identities=19%  Similarity=0.140  Sum_probs=96.6

Q ss_pred             CceEEEEeCCccccCCCCC---CHHHHHHHHHcCCCCeeecCCCcceeceeHHHHHHHHHHHHhccccCCCCCCCCCCCC
Q 017760           72 CLYTCAVRPAAIYGPGEER---HLPRIVSLAKLGLVPFKIGEPSVKTDWIYVDNLVLALILASMGLLDDIPGQKGRPIAS  148 (366)
Q Consensus        72 ~l~~~ilRp~~iyGp~~~~---~l~~~i~~~~~g~~~~~~g~~~~~~~~v~vdDla~a~~~a~~~l~~~~~~~~~~~~~~  148 (366)
                      +++++++||+++|||+...   .....+..+..|...  .  +++.++|+||+|+|++++.+++           .+.. 
T Consensus       181 ~~~~~~lRp~~v~Gp~~~~~~~~~~~~~~~~~~~~~~--~--~~~~~~~i~v~Dva~a~~~~~~-----------~~~~-  244 (322)
T PLN02662        181 GIDMVTINPAMVIGPLLQPTLNTSAEAILNLINGAQT--F--PNASYRWVDVRDVANAHIQAFE-----------IPSA-  244 (322)
T ss_pred             CCcEEEEeCCcccCCCCCCCCCchHHHHHHHhcCCcc--C--CCCCcCeEEHHHHHHHHHHHhc-----------CcCc-
Confidence            6789999999999998642   334445555555432  2  2467899999999999999996           3222 


Q ss_pred             CccEEecCCCCCCHHHHHHHHHHhcCCCCCccccCHHHHHHHHHHHHHHHHhhhhccccccCCCCCCcHHhhhhhcccce
Q 017760          149 GQPYFVSDGFPINTFEFIGPLLKTLDYDLPKSWLAVPHALFLGKVFSFFYSVLYPWLNRWWLPQPLILPAEVYKVGVTHY  228 (366)
Q Consensus       149 g~~y~I~~~~~vs~~e~~~~l~~~lg~~~~~~~lp~~~~~~~a~~~e~~~~~~~~~~~~~~~~~p~l~~~ev~~~~~~~~  228 (366)
                      ++.||++ ++++|+.|+++.+.+.++..    .+|...                       .+..   + ..    ....
T Consensus       245 ~~~~~~~-g~~~s~~e~~~~i~~~~~~~----~~~~~~-----------------------~~~~---~-~~----~~~~  288 (322)
T PLN02662        245 SGRYCLV-ERVVHYSEVVKILHELYPTL----QLPEKC-----------------------ADDK---P-YV----PTYQ  288 (322)
T ss_pred             CCcEEEe-CCCCCHHHHHHHHHHHCCCC----CCCCCC-----------------------CCcc---c-cc----cccc
Confidence            3478887 57899999999999987632    111100                       0000   0 00    1135


Q ss_pred             ecHHHHHHhcCCCCCCChHHHHHHHHHHHHhccc
Q 017760          229 FSLLKAKDELCYVPIVSPREGMAATISYWQDRKR  262 (366)
Q Consensus       229 ~d~~ka~~~LG~~p~~~~~e~l~~~v~~~~~~~~  262 (366)
                      .|++|+++ |||+| .+++++++++++||++++.
T Consensus       289 ~d~~k~~~-lg~~~-~~~~~~l~~~~~~~~~~~~  320 (322)
T PLN02662        289 VSKEKAKS-LGIEF-IPLEVSLKDTVESLKEKGF  320 (322)
T ss_pred             cChHHHHH-hCCcc-ccHHHHHHHHHHHHHHcCC
Confidence            89999985 99997 5999999999999988764

>PRK11150 rfaD ADP-L-glycero-D-mannoheptose-6-epimerase; Provisional

Probab=99.86  E-value=8.9e-21  Score=179.12  Aligned_cols=143  Identities=15%  Similarity=0.181  Sum_probs=103.8

Q ss_pred             CCCceEEEEeCCccccCCCCC--C----HHHHHHHHHcCCCCeee-cCCCcceeceeHHHHHHHHHHHHhccccCCCCCC
Q 017760           70 RKCLYTCAVRPAAIYGPGEER--H----LPRIVSLAKLGLVPFKI-GEPSVKTDWIYVDNLVLALILASMGLLDDIPGQK  142 (366)
Q Consensus        70 ~~~l~~~ilRp~~iyGp~~~~--~----l~~~i~~~~~g~~~~~~-g~~~~~~~~v~vdDla~a~~~a~~~l~~~~~~~~  142 (366)
                      ..+++++++||+++|||++..  .    ...+...+.+|..+.+. |+++..++|+||+|+|++++.+++.         
T Consensus       157 ~~~~~~~~lR~~~vyG~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~g~~~~~r~~i~v~D~a~a~~~~~~~---------  227 (308)
T PRK11150        157 EANSQICGFRYFNVYGPREGHKGSMASVAFHLNNQLNNGENPKLFEGSENFKRDFVYVGDVAAVNLWFWEN---------  227 (308)
T ss_pred             HcCCCEEEEeeeeecCCCCCCCCccchhHHHHHHHHhcCCCCEEecCCCceeeeeeeHHHHHHHHHHHHhc---------
Confidence            357889999999999998632  2    23444667777755455 5667889999999999999998862         


Q ss_pred             CCCCCCCccEEecCCCCCCHHHHHHHHHHhcCCCCCccccCHHHHHHHHHHHHHHHHhhhhccccccCCCCCCcHHhhhh
Q 017760          143 GRPIASGQPYFVSDGFPINTFEFIGPLLKTLDYDLPKSWLAVPHALFLGKVFSFFYSVLYPWLNRWWLPQPLILPAEVYK  222 (366)
Q Consensus       143 ~~~~~~g~~y~I~~~~~vs~~e~~~~l~~~lg~~~~~~~lp~~~~~~~a~~~e~~~~~~~~~~~~~~~~~p~l~~~ev~~  222 (366)
                        .  .+++||+++++++|+.|+++.+.+.+|.. +....|.                          + +....    .
T Consensus       228 --~--~~~~yni~~~~~~s~~el~~~i~~~~~~~-~~~~~~~--------------------------~-~~~~~----~  271 (308)
T PRK11150        228 --G--VSGIFNCGTGRAESFQAVADAVLAYHKKG-EIEYIPF--------------------------P-DKLKG----R  271 (308)
T ss_pred             --C--CCCeEEcCCCCceeHHHHHHHHHHHhCCC-cceeccC--------------------------c-ccccc----c
Confidence              1  24699999999999999999999999843 1111110                          0 00000    0


Q ss_pred             hcccceecHHHHHHhcCCCCC-CChHHHHHHHHHHHH
Q 017760          223 VGVTHYFSLLKAKDELCYVPI-VSPREGMAATISYWQ  258 (366)
Q Consensus       223 ~~~~~~~d~~ka~~~LG~~p~-~~~~e~l~~~v~~~~  258 (366)
                      .......|++|+++ +||+|+ .+++++|+++++|+.
T Consensus       272 ~~~~~~~d~~k~~~-~g~~p~~~~~~~gl~~~~~~~~  307 (308)
T PRK11150        272 YQAFTQADLTKLRA-AGYDKPFKTVAEGVAEYMAWLN  307 (308)
T ss_pred             cceecccCHHHHHh-cCCCCCCCCHHHHHHHHHHHhh
Confidence            11122479999986 799987 599999999999974

>TIGR01179 galE UDP-glucose-4-epimerase

Probab=99.86  E-value=2.5e-20  Score=176.71  Aligned_cols=146  Identities=17%  Similarity=0.113  Sum_probs=105.3

Q ss_pred             CCceEEEEeCCccccCCCC-----------CCHHHHHHHHH-cCCCCeee------cCCCcceeceeHHHHHHHHHHHHh
Q 017760           71 KCLYTCAVRPAAIYGPGEE-----------RHLPRIVSLAK-LGLVPFKI------GEPSVKTDWIYVDNLVLALILASM  132 (366)
Q Consensus        71 ~~l~~~ilRp~~iyGp~~~-----------~~l~~~i~~~~-~g~~~~~~------g~~~~~~~~v~vdDla~a~~~a~~  132 (366)
                      .+++++++||+.+|||...           ..++.+..... ....+...      +++++.++|+|++|+++++..+++
T Consensus       164 ~~~~~~ilR~~~v~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~v~~~D~a~~~~~~~~  243 (328)
T TIGR01179       164 PGLSYVILRYFNVAGADPEGTIGEDPPGITHLIPYACQVAVGKRDKLTIFGTDYPTPDGTCVRDYIHVMDLADAHLAALE  243 (328)
T ss_pred             cCCCEEEEecCcccCCCCCCccccCCcccchHHHHHHHHHHhCCCCeEEeCCcccCCCCceEEeeeeHHHHHHHHHHHHh
Confidence            6789999999999999642           12334444333 22222222      356788999999999999999986


Q ss_pred             ccccCCCCCCCCCCCCCccEEecCCCCCCHHHHHHHHHHhcCCCCCccccCHHHHHHHHHHHHHHHHhhhhccccccCCC
Q 017760          133 GLLDDIPGQKGRPIASGQPYFVSDGFPINTFEFIGPLLKTLDYDLPKSWLAVPHALFLGKVFSFFYSVLYPWLNRWWLPQ  212 (366)
Q Consensus       133 ~l~~~~~~~~~~~~~~g~~y~I~~~~~vs~~e~~~~l~~~lg~~~~~~~lp~~~~~~~a~~~e~~~~~~~~~~~~~~~~~  212 (366)
                      ...         ....+++||+++++++|+.|+++.+.+.+|.+.+....|                            .
T Consensus       244 ~~~---------~~~~~~~~n~~~~~~~s~~ei~~~~~~~~g~~~~~~~~~----------------------------~  286 (328)
T TIGR01179       244 YLL---------NGGESHVYNLGYGQGFSVLEVIEAFKKVSGVDFPVELAP----------------------------R  286 (328)
T ss_pred             hhh---------cCCCcceEEcCCCCcccHHHHHHHHHHHhCCCcceEeCC----------------------------C
Confidence            311         124568999999999999999999999999765432211                            0


Q ss_pred             CCCcHHhhhhhcccceecHHHHHHhcCCCCCCC-hHHHHHHHHHHHHhc
Q 017760          213 PLILPAEVYKVGVTHYFSLLKAKDELCYVPIVS-PREGMAATISYWQDR  260 (366)
Q Consensus       213 p~l~~~ev~~~~~~~~~d~~ka~~~LG~~p~~~-~~e~l~~~v~~~~~~  260 (366)
                      ..   .+    ......|++|++++|||+|.++ ++++++++++|++++
T Consensus       287 ~~---~~----~~~~~~~~~~~~~~lg~~p~~~~l~~~~~~~~~~~~~~  328 (328)
T TIGR01179       287 RP---GD----PASLVADASKIRRELGWQPKYTDLEIIIKTAWRWESRN  328 (328)
T ss_pred             CC---cc----ccchhcchHHHHHHhCCCCCcchHHHHHHHHHHHHhcC
Confidence            00   00    0122469999999999999997 999999999999764

This enzyme interconverts UDP-glucose and UDP-galactose. A set of related proteins, some of which are tentatively identified as UDP-glucose-4-epimerase in Thermotoga maritima, Bacillus halodurans, and several archaea, but deeply branched from this set and lacking experimental evidence, are excluded from this model and described separately.

>PLN02896 cinnamyl-alcohol dehydrogenase

Probab=99.85  E-value=2.1e-20  Score=180.04  Aligned_cols=143  Identities=15%  Similarity=0.075  Sum_probs=95.5

Q ss_pred             CCceEEEEeCCccccCCCCCCHHHHHHHHH---cCCCC--eeecC---CCcceeceeHHHHHHHHHHHHhccccCCCCCC
Q 017760           71 KCLYTCAVRPAAIYGPGEERHLPRIVSLAK---LGLVP--FKIGE---PSVKTDWIYVDNLVLALILASMGLLDDIPGQK  142 (366)
Q Consensus        71 ~~l~~~ilRp~~iyGp~~~~~l~~~i~~~~---~g~~~--~~~g~---~~~~~~~v~vdDla~a~~~a~~~l~~~~~~~~  142 (366)
                      .+++++++||+++|||+....++.++..+.   .|...  ...+.   ....++|+||+|+|++++.+++          
T Consensus       194 ~~~~~~~lR~~~vyGp~~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~dfi~v~Dva~a~~~~l~----------  263 (353)
T PLN02896        194 NGIDLVSVITTTVAGPFLTPSVPSSIQVLLSPITGDSKLFSILSAVNSRMGSIALVHIEDICDAHIFLME----------  263 (353)
T ss_pred             cCCeEEEEcCCcccCCCcCCCCCchHHHHHHHhcCCccccccccccccccCceeEEeHHHHHHHHHHHHh----------
Confidence            367799999999999987544444443332   34321  11111   1124699999999999999996          


Q ss_pred             CCCCCCCccEEecCCCCCCHHHHHHHHHHhcCCCCCccccCHHHHHHHHHHHHHHHHhhhhccccccCCCCCCcHHhhhh
Q 017760          143 GRPIASGQPYFVSDGFPINTFEFIGPLLKTLDYDLPKSWLAVPHALFLGKVFSFFYSVLYPWLNRWWLPQPLILPAEVYK  222 (366)
Q Consensus       143 ~~~~~~g~~y~I~~~~~vs~~e~~~~l~~~lg~~~~~~~lp~~~~~~~a~~~e~~~~~~~~~~~~~~~~~p~l~~~ev~~  222 (366)
                       .+. .++.|++ +++++++.|+++.+.+.++.....+..                            ..+.       .
T Consensus       264 -~~~-~~~~~~~-~~~~~s~~el~~~i~~~~~~~~~~~~~----------------------------~~~~-------~  305 (353)
T PLN02896        264 -QTK-AEGRYIC-CVDSYDMSELINHLSKEYPCSNIQVRL----------------------------DEEK-------R  305 (353)
T ss_pred             -CCC-cCccEEe-cCCCCCHHHHHHHHHHhCCCCCccccc----------------------------cccc-------c
Confidence             222 2346864 567899999999999998732111110                            0000       0


Q ss_pred             hcccceecHHHHHHhcCCCCCCChHHHHHHHHHHHHhccc
Q 017760          223 VGVTHYFSLLKAKDELCYVPIVSPREGMAATISYWQDRKR  262 (366)
Q Consensus       223 ~~~~~~~d~~ka~~~LG~~p~~~~~e~l~~~v~~~~~~~~  262 (366)
                      .......|++|+++ +||+|+++++++|+++++|+++++-
T Consensus       306 ~~~~~~~~~~~~~~-lGw~p~~~l~~~i~~~~~~~~~~~~  344 (353)
T PLN02896        306 GSIPSEISSKKLRD-LGFEYKYGIEEIIDQTIDCCVDHGF  344 (353)
T ss_pred             CccccccCHHHHHH-cCCCccCCHHHHHHHHHHHHHHCCC
Confidence            01112458888875 9999999999999999999998765

>PLN02650 dihydroflavonol-4-reductase

Probab=99.85  E-value=3.4e-20  Score=178.47  Aligned_cols=141  Identities=14%  Similarity=0.146  Sum_probs=93.9

Q ss_pred             CceEEEEeCCccccCCCCCC-HHHHHHHH--HcCCCCeeecCCCcceeceeHHHHHHHHHHHHhccccCCCCCCCCCCCC
Q 017760           72 CLYTCAVRPAAIYGPGEERH-LPRIVSLA--KLGLVPFKIGEPSVKTDWIYVDNLVLALILASMGLLDDIPGQKGRPIAS  148 (366)
Q Consensus        72 ~l~~~ilRp~~iyGp~~~~~-l~~~i~~~--~~g~~~~~~g~~~~~~~~v~vdDla~a~~~a~~~l~~~~~~~~~~~~~~  148 (366)
                      +++++++||+++|||+.... .+.++..+  ..+... ..+. ...++|+||+|+|++++.+++           .+. .
T Consensus       182 gi~~~ilRp~~v~Gp~~~~~~~~~~~~~~~~~~~~~~-~~~~-~~~r~~v~V~Dva~a~~~~l~-----------~~~-~  247 (351)
T PLN02650        182 GLDFISIIPTLVVGPFISTSMPPSLITALSLITGNEA-HYSI-IKQGQFVHLDDLCNAHIFLFE-----------HPA-A  247 (351)
T ss_pred             CCeEEEECCCceECCCCCCCCCccHHHHHHHhcCCcc-ccCc-CCCcceeeHHHHHHHHHHHhc-----------CcC-c
Confidence            67899999999999986432 22233322  223321 1222 234799999999999999996           222 2


Q ss_pred             CccEEecCCCCCCHHHHHHHHHHhcCCCCCccccCHHHHHHHHHHHHHHHHhhhhccccccCCCCCCcHHhhhhhcccce
Q 017760          149 GQPYFVSDGFPINTFEFIGPLLKTLDYDLPKSWLAVPHALFLGKVFSFFYSVLYPWLNRWWLPQPLILPAEVYKVGVTHY  228 (366)
Q Consensus       149 g~~y~I~~~~~vs~~e~~~~l~~~lg~~~~~~~lp~~~~~~~a~~~e~~~~~~~~~~~~~~~~~p~l~~~ev~~~~~~~~  228 (366)
                      ++.| +++++++|+.|+++.+.+.++..    .+|...                        ...   +.+.    ....
T Consensus       248 ~~~~-i~~~~~~s~~el~~~i~~~~~~~----~~~~~~------------------------~~~---~~~~----~~~~  291 (351)
T PLN02650        248 EGRY-ICSSHDATIHDLAKMLREKYPEY----NIPARF------------------------PGI---DEDL----KSVE  291 (351)
T ss_pred             CceE-EecCCCcCHHHHHHHHHHhCccc----CCCCCC------------------------CCc---Cccc----cccc
Confidence            3478 56667899999999999987621    111000                        000   0011    1124


Q ss_pred             ecHHHHHHhcCCCCCCChHHHHHHHHHHHHhcccc
Q 017760          229 FSLLKAKDELCYVPIVSPREGMAATISYWQDRKRK  263 (366)
Q Consensus       229 ~d~~ka~~~LG~~p~~~~~e~l~~~v~~~~~~~~~  263 (366)
                      .|++|++ +|||+|+++++++|+++++|+++++.-
T Consensus       292 ~d~~k~~-~lG~~p~~~l~egl~~~i~~~~~~~~~  325 (351)
T PLN02650        292 FSSKKLT-DLGFTFKYSLEDMFDGAIETCREKGLI  325 (351)
T ss_pred             CChHHHH-HhCCCCCCCHHHHHHHHHHHHHHcCCC
Confidence            6888875 699999999999999999999876644

>PLN02725 GDP-4-keto-6-deoxymannose-3,5-epimerase-4-reductase

Probab=99.84  E-value=1.6e-20  Score=176.82  Aligned_cols=145  Identities=15%  Similarity=0.235  Sum_probs=107.8

Q ss_pred             CCceEEEEeCCccccCCCC------CCHHHHHHH----HHcCCCCee-ecCCCcceeceeHHHHHHHHHHHHhccccCCC
Q 017760           71 KCLYTCAVRPAAIYGPGEE------RHLPRIVSL----AKLGLVPFK-IGEPSVKTDWIYVDNLVLALILASMGLLDDIP  139 (366)
Q Consensus        71 ~~l~~~ilRp~~iyGp~~~------~~l~~~i~~----~~~g~~~~~-~g~~~~~~~~v~vdDla~a~~~a~~~l~~~~~  139 (366)
                      .+++++++||+.+|||++.      ..++.++..    ...+..... ++++++.++|+|++|+|+++..+++.      
T Consensus       148 ~~~~~~~~R~~~vyG~~~~~~~~~~~~~~~~i~~~~~~~~~~~~~~~~~~~g~~~~~~i~v~Dv~~~~~~~~~~------  221 (306)
T PLN02725        148 YGWDAISGMPTNLYGPHDNFHPENSHVIPALIRRFHEAKANGAPEVVVWGSGSPLREFLHVDDLADAVVFLMRR------  221 (306)
T ss_pred             hCCCEEEEEecceeCCCCCCCCCCCcccHHHHHHHHHHhhcCCCeEEEcCCCCeeeccccHHHHHHHHHHHHhc------
Confidence            3678999999999999853      335555543    345555444 68888999999999999999999862      


Q ss_pred             CCCCCCCCCCccEEecCCCCCCHHHHHHHHHHhcCCCCCccccCHHHHHHHHHHHHHHHHhhhhccccccCCCCCCcHHh
Q 017760          140 GQKGRPIASGQPYFVSDGFPINTFEFIGPLLKTLDYDLPKSWLAVPHALFLGKVFSFFYSVLYPWLNRWWLPQPLILPAE  219 (366)
Q Consensus       140 ~~~~~~~~~g~~y~I~~~~~vs~~e~~~~l~~~lg~~~~~~~lp~~~~~~~a~~~e~~~~~~~~~~~~~~~~~p~l~~~e  219 (366)
                           . ..++.||+++++++|+.|+++.+++.+|.+.+....                            +.+.   .+
T Consensus       222 -----~-~~~~~~ni~~~~~~s~~e~~~~i~~~~~~~~~~~~~----------------------------~~~~---~~  264 (306)
T PLN02725        222 -----Y-SGAEHVNVGSGDEVTIKELAELVKEVVGFEGELVWD----------------------------TSKP---DG  264 (306)
T ss_pred             -----c-ccCcceEeCCCCcccHHHHHHHHHHHhCCCCceeec----------------------------CCCC---Cc
Confidence                 2 234679999999999999999999999865432110                            1100   00


Q ss_pred             hhhhcccceecHHHHHHhcCCCCCCChHHHHHHHHHHHHhcccc
Q 017760          220 VYKVGVTHYFSLLKAKDELCYVPIVSPREGMAATISYWQDRKRK  263 (366)
Q Consensus       220 v~~~~~~~~~d~~ka~~~LG~~p~~~~~e~l~~~v~~~~~~~~~  263 (366)
                      .    ....+|++|++ ++||+|+++++++++++++|++++...
T Consensus       265 ~----~~~~~d~~k~~-~lg~~p~~~~~~~l~~~~~~~~~~~~~  303 (306)
T PLN02725        265 T----PRKLMDSSKLR-SLGWDPKFSLKDGLQETYKWYLENYET  303 (306)
T ss_pred             c----cccccCHHHHH-HhCCCCCCCHHHHHHHHHHHHHhhhhc
Confidence            0    12257999997 599999999999999999999887643

>TIGR01214 rmlD dTDP-4-dehydrorhamnose reductase

Probab=99.84  E-value=2e-20  Score=174.69  Aligned_cols=146  Identities=16%  Similarity=0.104  Sum_probs=105.0

Q ss_pred             CceEEEEeCCccccCCC-CCCHHHHHHHHHcCCCCeeecCCCcceeceeHHHHHHHHHHHHhccccCCCCCCCCCCCCCc
Q 017760           72 CLYTCAVRPAAIYGPGE-ERHLPRIVSLAKLGLVPFKIGEPSVKTDWIYVDNLVLALILASMGLLDDIPGQKGRPIASGQ  150 (366)
Q Consensus        72 ~l~~~ilRp~~iyGp~~-~~~l~~~i~~~~~g~~~~~~g~~~~~~~~v~vdDla~a~~~a~~~l~~~~~~~~~~~~~~g~  150 (366)
                      +++++++||+.+|||++ ..++..++..+.++..+...++  ..++++|++|+|+++..+++           .+...++
T Consensus       139 ~~~~~ilR~~~v~G~~~~~~~~~~~~~~~~~~~~~~~~~~--~~~~~v~v~Dva~a~~~~~~-----------~~~~~~~  205 (287)
T TIGR01214       139 GPNALIVRTSWLYGGGGGRNFVRTMLRLAGRGEELRVVDD--QIGSPTYAKDLARVIAALLQ-----------RLARARG  205 (287)
T ss_pred             CCCeEEEEeeecccCCCCCCHHHHHHHHhhcCCCceEecC--CCcCCcCHHHHHHHHHHHHh-----------hccCCCC
Confidence            67899999999999986 4556777877777766555554  56899999999999999996           3334578


Q ss_pred             cEEecCCCCCCHHHHHHHHHHhcCCCCCccccCHHHHHHHHHHHHHHHHhhhhccccccCCCCCCcHHhhhhhcccceec
Q 017760          151 PYFVSDGFPINTFEFIGPLLKTLDYDLPKSWLAVPHALFLGKVFSFFYSVLYPWLNRWWLPQPLILPAEVYKVGVTHYFS  230 (366)
Q Consensus       151 ~y~I~~~~~vs~~e~~~~l~~~lg~~~~~~~lp~~~~~~~a~~~e~~~~~~~~~~~~~~~~~p~l~~~ev~~~~~~~~~d  230 (366)
                      +||+++++++|+.|+++.+.+.+|.+......|.....  .   .   .        . .+.+...       .....+|
T Consensus       206 ~~ni~~~~~~s~~e~~~~i~~~~~~~~~~~~~~~~~~~--~---~---~--------~-~~~~~~~-------~~~~~~d  261 (287)
T TIGR01214       206 VYHLANSGQCSWYEFAQAIFEEAGADGLLLHPQEVKPI--S---S---K--------E-YPRPARR-------PAYSVLD  261 (287)
T ss_pred             eEEEECCCCcCHHHHHHHHHHHhCcccccccCceeEee--c---H---H--------H-cCCCCCC-------CCccccc
Confidence            99999999999999999999999976543222110000  0   0   0        0 0111100       1123689


Q ss_pred             HHHHHHhcCCCCCCChHHHHHHHHH
Q 017760          231 LLKAKDELCYVPIVSPREGMAATIS  255 (366)
Q Consensus       231 ~~ka~~~LG~~p~~~~~e~l~~~v~  255 (366)
                      ++|+++++||++ .++++++.++++
T Consensus       262 ~~~~~~~lg~~~-~~~~~~l~~~~~  285 (287)
T TIGR01214       262 NTKLVKTLGTPL-PHWREALRAYLQ  285 (287)
T ss_pred             hHHHHHHcCCCC-ccHHHHHHHHHh
Confidence            999999999955 599999998875

This enzyme catalyzes the last of 4 steps in making dTDP-rhamnose, a precursor of LPS core antigen, O-antigen, etc.

>PLN02986 cinnamyl-alcohol dehydrogenase family protein

Probab=99.84  E-value=1.2e-19  Score=172.59  Aligned_cols=137  Identities=17%  Similarity=0.126  Sum_probs=96.6

Q ss_pred             CCceEEEEeCCccccCCCCC---CHHHHHHHHHcCCCCeeecCCCcceeceeHHHHHHHHHHHHhccccCCCCCCCCCCC
Q 017760           71 KCLYTCAVRPAAIYGPGEER---HLPRIVSLAKLGLVPFKIGEPSVKTDWIYVDNLVLALILASMGLLDDIPGQKGRPIA  147 (366)
Q Consensus        71 ~~l~~~ilRp~~iyGp~~~~---~l~~~i~~~~~g~~~~~~g~~~~~~~~v~vdDla~a~~~a~~~l~~~~~~~~~~~~~  147 (366)
                      .+++++++||+++|||+...   ....++..+..|...  .+  ++.++|+||+|+|++++.+++           .+..
T Consensus       181 ~~~~~~~lrp~~v~Gp~~~~~~~~~~~~~~~~~~g~~~--~~--~~~~~~v~v~Dva~a~~~al~-----------~~~~  245 (322)
T PLN02986        181 NGIDMVVLNPGFICGPLLQPTLNFSVELIVDFINGKNL--FN--NRFYRFVDVRDVALAHIKALE-----------TPSA  245 (322)
T ss_pred             hCCeEEEEcccceeCCCCCCCCCccHHHHHHHHcCCCC--CC--CcCcceeEHHHHHHHHHHHhc-----------Cccc
Confidence            36789999999999997542   234555555566642  33  456899999999999999997           3333


Q ss_pred             CCccEEecCCCCCCHHHHHHHHHHhcCCCCCccccCHHHHHHHHHHHHHHHHhhhhccccccCCCCCCcHHhhhhhcccc
Q 017760          148 SGQPYFVSDGFPINTFEFIGPLLKTLDYDLPKSWLAVPHALFLGKVFSFFYSVLYPWLNRWWLPQPLILPAEVYKVGVTH  227 (366)
Q Consensus       148 ~g~~y~I~~~~~vs~~e~~~~l~~~lg~~~~~~~lp~~~~~~~a~~~e~~~~~~~~~~~~~~~~~p~l~~~ev~~~~~~~  227 (366)
                       ++.||++ ++++|+.|+++.+.+.++.. .   +|.                          ..+   +.+..  ....
T Consensus       246 -~~~yni~-~~~~s~~e~~~~i~~~~~~~-~---~~~--------------------------~~~---~~~~~--~~~~  288 (322)
T PLN02986        246 -NGRYIID-GPIMSVNDIIDILRELFPDL-C---IAD--------------------------TNE---ESEMN--EMIC  288 (322)
T ss_pred             -CCcEEEe-cCCCCHHHHHHHHHHHCCCC-C---CCC--------------------------CCc---ccccc--ccCC
Confidence             3489995 56799999999999998621 1   110                          000   01110  0111


Q ss_pred             eecHHHHHHhcCCCCCCChHHHHHHHHHHHHhcc
Q 017760          228 YFSLLKAKDELCYVPIVSPREGMAATISYWQDRK  261 (366)
Q Consensus       228 ~~d~~ka~~~LG~~p~~~~~e~l~~~v~~~~~~~  261 (366)
                      ..|++|+++ |||+|+ +++|+++++++|+++.+
T Consensus       289 ~~d~~~~~~-lg~~~~-~l~e~~~~~~~~~~~~~  320 (322)
T PLN02986        289 KVCVEKVKN-LGVEFT-PMKSSLRDTILSLKEKC  320 (322)
T ss_pred             ccCHHHHHH-cCCccc-CHHHHHHHHHHHHHHcC
Confidence            378899865 999997 99999999999998754

>PRK07201 short chain dehydrogenase; Provisional

Probab=99.84  E-value=1.2e-19  Score=188.51  Aligned_cols=175  Identities=15%  Similarity=0.050  Sum_probs=124.5

Q ss_pred             CCCceEEEEeCCccccCCCCCC---------HHHHHHHHHc-CCCCeeecCCCcceeceeHHHHHHHHHHHHhccccCCC
Q 017760           70 RKCLYTCAVRPAAIYGPGEERH---------LPRIVSLAKL-GLVPFKIGEPSVKTDWIYVDNLVLALILASMGLLDDIP  139 (366)
Q Consensus        70 ~~~l~~~ilRp~~iyGp~~~~~---------l~~~i~~~~~-g~~~~~~g~~~~~~~~v~vdDla~a~~~a~~~l~~~~~  139 (366)
                      ..+++++++||+.|||++....         +..++..+.. .......+++....+++|+||+++++..+++       
T Consensus       165 ~~g~~~~ilRp~~v~G~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~vddva~ai~~~~~-------  237 (657)
T PRK07201        165 ECGLPWRVYRPAVVVGDSRTGEMDKIDGPYYFFKVLAKLAKLPSWLPMVGPDGGRTNIVPVDYVADALDHLMH-------  237 (657)
T ss_pred             cCCCcEEEEcCCeeeecCCCCccccCCcHHHHHHHHHHhccCCcccccccCCCCeeeeeeHHHHHHHHHHHhc-------
Confidence            3578999999999999865321         1122222211 1222344566677899999999999999886       


Q ss_pred             CCCCCCCCCCccEEecCCCCCCHHHHHHHHHHhcCCCC---CccccCHHHHHHHHHHHHHHHHhhhhccccccCCCCCCc
Q 017760          140 GQKGRPIASGQPYFVSDGFPINTFEFIGPLLKTLDYDL---PKSWLAVPHALFLGKVFSFFYSVLYPWLNRWWLPQPLIL  216 (366)
Q Consensus       140 ~~~~~~~~~g~~y~I~~~~~vs~~e~~~~l~~~lg~~~---~~~~lp~~~~~~~a~~~e~~~~~~~~~~~~~~~~~p~l~  216 (366)
                          .+...|++||+++++++|+.|+++.+.+.+|.+.   +...+|.++...++.+.+....+...+     .....+.
T Consensus       238 ----~~~~~g~~~ni~~~~~~s~~el~~~i~~~~g~~~~~~~~~~~p~~~~~~~~~~~~~~~~~~~~~-----~~~~~~~  308 (657)
T PRK07201        238 ----KDGRDGQTFHLTDPKPQRVGDIYNAFARAAGAPPDARLFGFLPGFVAAPLLAALGPVRRLRNAV-----ATQLGIP  308 (657)
T ss_pred             ----CcCCCCCEEEeCCCCCCcHHHHHHHHHHHhCCCccccccccCChHHHHHHhhhcchhhHHHHHH-----HHhcCCC
Confidence                3455688999999999999999999999999887   667789888777666322222111100     0234455


Q ss_pred             HHhhhhhcccceecHHHHHHhc---CCCCCCChHHHHHHHHHHHHhcc
Q 017760          217 PAEVYKVGVTHYFSLLKAKDEL---CYVPIVSPREGMAATISYWQDRK  261 (366)
Q Consensus       217 ~~ev~~~~~~~~~d~~ka~~~L---G~~p~~~~~e~l~~~v~~~~~~~  261 (366)
                      +..+...+.+..||++|++++|   |++.. ++++.+.+.++||.++-
T Consensus       309 ~~~l~~~~~~~~f~~~~~~~~L~~~~~~~p-~~~~~~~~~~~~~~~~~  355 (657)
T PRK07201        309 PEVLDFVNYPTTFDSRETRAALKGSGIEVP-RLASYAPRLWDYWERHL  355 (657)
T ss_pred             HHHHHhccCCCeeccHHHHHHhccCCcCCC-ChHHHHHHHHHHHHhcC
Confidence            6677777777799999999998   55543 67899999999886653

>KOG1502 consensus Flavonol reductase/cinnamoyl-CoA reductase [Defense mechanisms]

Probab=99.83  E-value=1e-19  Score=168.59  Aligned_cols=200  Identities=21%  Similarity=0.208  Sum_probs=141.0

Q ss_pred             cCCeEEEEcCCChhHHHHHHHHHHcCCceEEEEecCCCCcc----ccccc--CCCeEEEEcc------------------
Q 017760           10 EGKTFLVTGGLGHVGSALCLELVRRGAYQVRAFDLRTNSPW----SHLLI--NHGVHCIQGL------------------   65 (366)
Q Consensus        10 ~~~~VlITGgtGfiG~~L~~~L~~~g~~~V~~~dr~~~~~~----~~~~~--~~~v~~i~gD------------------   65 (366)
                      .+++|+|||||||||+++++.|+++| |.|+++.|++..+.    ..++.  .+....+.+|                  
T Consensus         5 ~~~~VcVTGAsGfIgswivk~LL~rG-Y~V~gtVR~~~~~k~~~~L~~l~~a~~~l~l~~aDL~d~~sf~~ai~gcdgVf   83 (327)
T KOG1502|consen    5 EGKKVCVTGASGFIGSWIVKLLLSRG-YTVRGTVRDPEDEKKTEHLRKLEGAKERLKLFKADLLDEGSFDKAIDGCDGVF   83 (327)
T ss_pred             CCcEEEEeCCchHHHHHHHHHHHhCC-CEEEEEEcCcchhhhHHHHHhcccCcccceEEeccccccchHHHHHhCCCEEE
Confidence            56899999999999999999999999 59999999886532    12222  3457788888                  


Q ss_pred             --------------------------------------------------------------------------------
Q 017760           66 --------------------------------------------------------------------------------   65 (366)
Q Consensus        66 --------------------------------------------------------------------------------   65 (366)
                                                                                                      
T Consensus        84 H~Asp~~~~~~~~e~~li~pav~Gt~nVL~ac~~~~sVkrvV~TSS~aAv~~~~~~~~~~~vvdE~~wsd~~~~~~~~~~  163 (327)
T KOG1502|consen   84 HTASPVDFDLEDPEKELIDPAVKGTKNVLEACKKTKSVKRVVYTSSTAAVRYNGPNIGENSVVDEESWSDLDFCRCKKLW  163 (327)
T ss_pred             EeCccCCCCCCCcHHhhhhHHHHHHHHHHHHHhccCCcceEEEeccHHHhccCCcCCCCCcccccccCCcHHHHHhhHHH
Confidence                                                                                            


Q ss_pred             -------------ccCCCCCceEEEEeCCccccCCCCCCH---HHHHHHHHcCCCCeeecCCCcceeceeHHHHHHHHHH
Q 017760           66 -------------RKNNRKCLYTCAVRPAAIYGPGEERHL---PRIVSLAKLGLVPFKIGEPSVKTDWIYVDNLVLALIL  129 (366)
Q Consensus        66 -------------ks~~~~~l~~~ilRp~~iyGp~~~~~l---~~~i~~~~~g~~~~~~g~~~~~~~~v~vdDla~a~~~  129 (366)
                                   +...+++++.+.+.|+.|+||.....+   ........+|..-. +  .+....||||+|+|.||+.
T Consensus       164 Y~~sK~lAEkaAw~fa~e~~~~lv~inP~lV~GP~l~~~l~~s~~~~l~~i~G~~~~-~--~n~~~~~VdVrDVA~AHv~  240 (327)
T KOG1502|consen  164 YALSKTLAEKAAWEFAKENGLDLVTINPGLVFGPGLQPSLNSSLNALLKLIKGLAET-Y--PNFWLAFVDVRDVALAHVL  240 (327)
T ss_pred             HHHHHHHHHHHHHHHHHhCCccEEEecCCceECCCcccccchhHHHHHHHHhccccc-C--CCCceeeEeHHHHHHHHHH
Confidence                         115566999999999999999876532   33444455664322 2  2344559999999999999


Q ss_pred             HHhccccCCCCCCCCCCCCCccEEecCCCCCCHHHHHHHHHHhcCCCCCccccCHHHHHHHHHHHHHHHHhhhhcccccc
Q 017760          130 ASMGLLDDIPGQKGRPIASGQPYFVSDGFPINTFEFIGPLLKTLDYDLPKSWLAVPHALFLGKVFSFFYSVLYPWLNRWW  209 (366)
Q Consensus       130 a~~~l~~~~~~~~~~~~~~g~~y~I~~~~~vs~~e~~~~l~~~lg~~~~~~~lp~~~~~~~a~~~e~~~~~~~~~~~~~~  209 (366)
                      |+|           .+.+. +.|.+.+.. .++.|+++.+.+.+....    +|..                        
T Consensus       241 a~E-----------~~~a~-GRyic~~~~-~~~~ei~~~l~~~~P~~~----ip~~------------------------  279 (327)
T KOG1502|consen  241 ALE-----------KPSAK-GRYICVGEV-VSIKEIADILRELFPDYP----IPKK------------------------  279 (327)
T ss_pred             HHc-----------CcccC-ceEEEecCc-ccHHHHHHHHHHhCCCCC----CCCC------------------------
Confidence            998           45555 467666554 669999999988885322    2211                        


Q ss_pred             CCCCCCcHHhhhhhcccceecHHHHHHhcCCCCCCChHHHHHHHHHHHHhcc
Q 017760          210 LPQPLILPAEVYKVGVTHYFSLLKAKDELCYVPIVSPREGMAATISYWQDRK  261 (366)
Q Consensus       210 ~~~p~l~~~ev~~~~~~~~~d~~ka~~~LG~~p~~~~~e~l~~~v~~~~~~~  261 (366)
                          .-  .+.......+.+|++|+++..|++.. +++|++.++++++++.+
T Consensus       280 ----~~--~~~~~~~~~~~~~~~k~k~lg~~~~~-~l~e~~~dt~~sl~~~~  324 (327)
T KOG1502|consen  280 ----NA--EEHEGFLTSFKVSSEKLKSLGGFKFR-PLEETLSDTVESLREKG  324 (327)
T ss_pred             ----CC--ccccccccccccccHHHHhcccceec-ChHHHHHHHHHHHHHhc
Confidence                00  01011111224799999985557775 99999999999998765

>COG1090 Predicted nucleoside-diphosphate sugar epimerase [General function prediction only]

Probab=99.83  E-value=1.7e-19  Score=161.37  Aligned_cols=200  Identities=22%  Similarity=0.231  Sum_probs=144.3

Q ss_pred             EEEEcCCChhHHHHHHHHHHcCCceEEEEecCCCCcccccccC----CCe-EEE--Ecc---------------------
Q 017760           14 FLVTGGLGHVGSALCLELVRRGAYQVRAFDLRTNSPWSHLLIN----HGV-HCI--QGL---------------------   65 (366)
Q Consensus        14 VlITGgtGfiG~~L~~~L~~~g~~~V~~~dr~~~~~~~~~~~~----~~v-~~i--~gD---------------------   65 (366)
                      |+|||||||||++|+..|.+.| |+|+.+.|+++......-..    +.+ +..  ..|                     
T Consensus         1 IliTGgTGlIG~~L~~~L~~~g-h~v~iltR~~~~~~~~~~~~v~~~~~~~~~~~~~~DavINLAG~~I~~rrWt~~~K~   79 (297)
T COG1090           1 ILITGGTGLIGRALTARLRKGG-HQVTILTRRPPKASQNLHPNVTLWEGLADALTLGIDAVINLAGEPIAERRWTEKQKE   79 (297)
T ss_pred             CeEeccccchhHHHHHHHHhCC-CeEEEEEcCCcchhhhcCccccccchhhhcccCCCCEEEECCCCccccccCCHHHHH
Confidence            6899999999999999999999 89999999986543211100    000 000  133                     


Q ss_pred             ------------------------------------------------------------------ccCCCCCceEEEEe
Q 017760           66 ------------------------------------------------------------------RKNNRKCLYTCAVR   79 (366)
Q Consensus        66 ------------------------------------------------------------------ks~~~~~l~~~ilR   79 (366)
                                                                                        ...+..+.++|.+|
T Consensus        80 ~i~~SRi~~T~~L~e~I~~~~~~P~~~isaSAvGyYG~~~~~~~tE~~~~g~~Fla~lc~~WE~~a~~a~~~gtRvvllR  159 (297)
T COG1090          80 EIRQSRINTTEKLVELIAASETKPKVLISASAVGYYGHSGDRVVTEESPPGDDFLAQLCQDWEEEALQAQQLGTRVVLLR  159 (297)
T ss_pred             HHHHHHhHHHHHHHHHHHhccCCCcEEEecceEEEecCCCceeeecCCCCCCChHHHHHHHHHHHHhhhhhcCceEEEEE
Confidence                                                                              11445688999999


Q ss_pred             CCccccCCCCCCHHHHHHHHHcCCCCeeecCCCcceeceeHHHHHHHHHHHHhccccCCCCCCCCCCCCCccEEecCCCC
Q 017760           80 PAAIYGPGEERHLPRIVSLAKLGLVPFKIGEPSVKTDWIYVDNLVLALILASMGLLDDIPGQKGRPIASGQPYFVSDGFP  159 (366)
Q Consensus        80 p~~iyGp~~~~~l~~~i~~~~~g~~~~~~g~~~~~~~~v~vdDla~a~~~a~~~l~~~~~~~~~~~~~~g~~y~I~~~~~  159 (366)
                      .+.|.|+.. +.++++....+.|.- -.+|+|++.++|||+||+++++..+++           ++..+| +||.+.+.|
T Consensus       160 tGvVLs~~G-GaL~~m~~~fk~glG-G~~GsGrQ~~SWIhieD~v~~I~fll~-----------~~~lsG-p~N~taP~P  225 (297)
T COG1090         160 TGVVLSPDG-GALGKMLPLFKLGLG-GKLGSGRQWFSWIHIEDLVNAILFLLE-----------NEQLSG-PFNLTAPNP  225 (297)
T ss_pred             EEEEecCCC-cchhhhcchhhhccC-CccCCCCceeeeeeHHHHHHHHHHHHh-----------CcCCCC-cccccCCCc
Confidence            999999854 467777766666553 348999999999999999999999997           556665 899999999


Q ss_pred             CCHHHHHHHHHHhcCCCCCccccCHHHHHHHHHHHHHHHHhhhhccccccCCCCCCcHHhhhhhcccceecHHHHHHhcC
Q 017760          160 INTFEFIGPLLKTLDYDLPKSWLAVPHALFLGKVFSFFYSVLYPWLNRWWLPQPLILPAEVYKVGVTHYFSLLKAKDELC  239 (366)
Q Consensus       160 vs~~e~~~~l~~~lg~~~~~~~lp~~~~~~~a~~~e~~~~~~~~~~~~~~~~~p~l~~~ev~~~~~~~~~d~~ka~~~LG  239 (366)
                      |+..||.+.+.+.++++.. ..+|....+++.  .|+...++.         .+              ..=..|+.+ .|
T Consensus       226 V~~~~F~~al~r~l~RP~~-~~vP~~~~rl~L--Ge~a~~lL~---------gQ--------------rvlP~kl~~-aG  278 (297)
T COG1090         226 VRNKEFAHALGRALHRPAI-LPVPSFALRLLL--GEMADLLLG---------GQ--------------RVLPKKLEA-AG  278 (297)
T ss_pred             CcHHHHHHHHHHHhCCCcc-ccCcHHHHHHHh--hhhHHHHhc---------cc--------------hhhHHHHHH-CC
Confidence            9999999999999997643 567777665543  244433332         11              122344443 78


Q ss_pred             CCCCC-ChHHHHHHHHH
Q 017760          240 YVPIV-SPREGMAATIS  255 (366)
Q Consensus       240 ~~p~~-~~~e~l~~~v~  255 (366)
                      |+-++ +++++|.+.+.
T Consensus       279 F~F~y~dl~~AL~~il~  295 (297)
T COG1090         279 FQFQYPDLEEALADILK  295 (297)
T ss_pred             CeeecCCHHHHHHHHHh
Confidence            88776 67888777653

>TIGR03589 PseB UDP-N-acetylglucosamine 4,6-dehydratase

Probab=99.82  E-value=2.1e-19  Score=171.21  Aligned_cols=191  Identities=15%  Similarity=0.184  Sum_probs=138.6

Q ss_pred             ccCCeEEEEcCCChhHHHHHHHHHHcC-CceEEEEecCCCCccc--ccccCCCeEEEEcc--------------------
Q 017760            9 IEGKTFLVTGGLGHVGSALCLELVRRG-AYQVRAFDLRTNSPWS--HLLINHGVHCIQGL--------------------   65 (366)
Q Consensus         9 ~~~~~VlITGgtGfiG~~L~~~L~~~g-~~~V~~~dr~~~~~~~--~~~~~~~v~~i~gD--------------------   65 (366)
                      +++++|+||||+||+|+++++.|+++| .++|++++++......  ......+++++++|                    
T Consensus         2 ~~~k~vLVTGatG~IG~~l~~~L~~~g~~~~V~~~~r~~~~~~~~~~~~~~~~~~~v~~Dl~d~~~l~~~~~~iD~Vih~   81 (324)
T TIGR03589         2 FNNKSILITGGTGSFGKAFISRLLENYNPKKIIIYSRDELKQWEMQQKFPAPCLRFFIGDVRDKERLTRALRGVDYVVHA   81 (324)
T ss_pred             cCCCEEEEeCCCCHHHHHHHHHHHHhCCCcEEEEEcCChhHHHHHHHHhCCCcEEEEEccCCCHHHHHHHHhcCCEEEEC
Confidence            456899999999999999999999986 2489999886543110  11112356777777                    


Q ss_pred             -----------------------------------------------------------------c----cCCCCCceEE
Q 017760           66 -----------------------------------------------------------------R----KNNRKCLYTC   76 (366)
Q Consensus        66 -----------------------------------------------------------------k----s~~~~~l~~~   76 (366)
                                                                                       +    .....+++++
T Consensus        82 Ag~~~~~~~~~~~~~~~~~Nv~g~~~ll~aa~~~~~~~iV~~SS~~~~~p~~~Y~~sK~~~E~l~~~~~~~~~~~gi~~~  161 (324)
T TIGR03589        82 AALKQVPAAEYNPFECIRTNINGAQNVIDAAIDNGVKRVVALSTDKAANPINLYGATKLASDKLFVAANNISGSKGTRFS  161 (324)
T ss_pred             cccCCCchhhcCHHHHHHHHHHHHHHHHHHHHHcCCCEEEEEeCCCCCCCCCHHHHHHHHHHHHHHHHHhhccccCcEEE
Confidence                                                                             0    1235689999


Q ss_pred             EEeCCccccCCCCCCHHHHHHHHHcCCCCeeecCCCcceeceeHHHHHHHHHHHHhccccCCCCCCCCCCCCCccEEecC
Q 017760           77 AVRPAAIYGPGEERHLPRIVSLAKLGLVPFKIGEPSVKTDWIYVDNLVLALILASMGLLDDIPGQKGRPIASGQPYFVSD  156 (366)
Q Consensus        77 ilRp~~iyGp~~~~~l~~~i~~~~~g~~~~~~g~~~~~~~~v~vdDla~a~~~a~~~l~~~~~~~~~~~~~~g~~y~I~~  156 (366)
                      ++||+++|||+. ..++.+...+..|......+++++.++|+|++|+|++++.++++            ...+++| ++.
T Consensus       162 ~lR~g~v~G~~~-~~i~~~~~~~~~~~~~~~i~~~~~~r~~i~v~D~a~a~~~al~~------------~~~~~~~-~~~  227 (324)
T TIGR03589       162 VVRYGNVVGSRG-SVVPFFKSLKEEGVTELPITDPRMTRFWITLEQGVNFVLKSLER------------MLGGEIF-VPK  227 (324)
T ss_pred             EEeecceeCCCC-CcHHHHHHHHHhCCCCeeeCCCCceEeeEEHHHHHHHHHHHHhh------------CCCCCEE-ccC
Confidence            999999999975 47788888777776334456778889999999999999999972            2245677 566


Q ss_pred             CCCCCHHHHHHHHHHhcCCCCCccccCHHHHHHHHHHHHHHHHhhhhccccccCCCCCCcHHhhhhhcccceecHHHHHH
Q 017760          157 GFPINTFEFIGPLLKTLDYDLPKSWLAVPHALFLGKVFSFFYSVLYPWLNRWWLPQPLILPAEVYKVGVTHYFSLLKAKD  236 (366)
Q Consensus       157 ~~~vs~~e~~~~l~~~lg~~~~~~~lp~~~~~~~a~~~e~~~~~~~~~~~~~~~~~p~l~~~ev~~~~~~~~~d~~ka~~  236 (366)
                      ++.+++.|+++.+.+..+....    +                           .++.-.+.+       ...|.+|+++
T Consensus       228 ~~~~sv~el~~~i~~~~~~~~~----~---------------------------~~~g~~~~~-------~~~~~~~~~~  269 (324)
T TIGR03589       228 IPSMKITDLAEAMAPECPHKIV----G---------------------------IRPGEKLHE-------VMITEDDARH  269 (324)
T ss_pred             CCcEEHHHHHHHHHhhCCeeEe----C---------------------------CCCCchhHh-------hhcChhhhhh
Confidence            6779999999999986532210    0                           111100111       1369999999


Q ss_pred             hcCCCCCCChHHHHH
Q 017760          237 ELCYVPIVSPREGMA  251 (366)
Q Consensus       237 ~LG~~p~~~~~e~l~  251 (366)
                      +|||+|++++++++.
T Consensus       270 ~lg~~~~~~l~~~~~  284 (324)
T TIGR03589       270 TYELGDYYAILPSIS  284 (324)
T ss_pred             hcCCCCeEEEccccc
Confidence            999999999988875

This enzyme catalyzes the first step in the biosynthesis of pseudaminic acid, the conversion of UDP-N-acetylglucosamine to UDP-4-keto-6-deoxy-N-acetylglucosamine. These sequences are members of the broader pfam01073 (3-beta hydroxysteroid dehydrogenase/isomerase family) family.

>TIGR01777 yfcH conserved hypothetical protein TIGR01777

Probab=99.81  E-value=6.2e-19  Score=164.67  Aligned_cols=139  Identities=16%  Similarity=0.095  Sum_probs=99.9

Q ss_pred             CCceEEEEeCCccccCCCCCCHHHHHHHHHcCCCCeeecCCCcceeceeHHHHHHHHHHHHhccccCCCCCCCCCCCCCc
Q 017760           71 KCLYTCAVRPAAIYGPGEERHLPRIVSLAKLGLVPFKIGEPSVKTDWIYVDNLVLALILASMGLLDDIPGQKGRPIASGQ  150 (366)
Q Consensus        71 ~~l~~~ilRp~~iyGp~~~~~l~~~i~~~~~g~~~~~~g~~~~~~~~v~vdDla~a~~~a~~~l~~~~~~~~~~~~~~g~  150 (366)
                      .+++++++||+.+|||++. ..+.+......... ..+|++++.++++|++|+|+++..+++           .+. .++
T Consensus       153 ~~~~~~ilR~~~v~G~~~~-~~~~~~~~~~~~~~-~~~g~~~~~~~~i~v~Dva~~i~~~l~-----------~~~-~~g  218 (292)
T TIGR01777       153 LGTRVVLLRTGIVLGPKGG-ALAKMLPPFRLGLG-GPLGSGRQWFSWIHIEDLVQLILFALE-----------NAS-ISG  218 (292)
T ss_pred             cCCceEEEeeeeEECCCcc-hhHHHHHHHhcCcc-cccCCCCcccccEeHHHHHHHHHHHhc-----------Ccc-cCC
Confidence            4688999999999999753 44555444333222 235788899999999999999999996           322 345


Q ss_pred             cEEecCCCCCCHHHHHHHHHHhcCCCCCccccCHHHHHHHHHHHHHHHHhhhhccccccCCCCCCcHHhhhhhcccceec
Q 017760          151 PYFVSDGFPINTFEFIGPLLKTLDYDLPKSWLAVPHALFLGKVFSFFYSVLYPWLNRWWLPQPLILPAEVYKVGVTHYFS  230 (366)
Q Consensus       151 ~y~I~~~~~vs~~e~~~~l~~~lg~~~~~~~lp~~~~~~~a~~~e~~~~~~~~~~~~~~~~~p~l~~~ev~~~~~~~~~d  230 (366)
                      +||+++++++|+.|+++.+.+.+|.+.+ ..+|.+......          +        ..+       .....+...+
T Consensus       219 ~~~~~~~~~~s~~di~~~i~~~~g~~~~-~~~p~~~~~~~~----------~--------~~~-------~~~~~~~~~~  272 (292)
T TIGR01777       219 PVNATAPEPVRNKEFAKALARALHRPAF-FPVPAFVLRALL----------G--------EMA-------DLLLKGQRVL  272 (292)
T ss_pred             ceEecCCCccCHHHHHHHHHHHhCCCCc-CcCCHHHHHHHh----------c--------hhh-------HHHhCCcccc
Confidence            8999999999999999999999997643 558877654321          0        000       0122234578


Q ss_pred             HHHHHHhcCCCCCC-ChHHHH
Q 017760          231 LLKAKDELCYVPIV-SPREGM  250 (366)
Q Consensus       231 ~~ka~~~LG~~p~~-~~~e~l  250 (366)
                      ++|+++ +||+|++ +++|++
T Consensus       273 ~~~~~~-~g~~~~~~~~~~~~  292 (292)
T TIGR01777       273 PEKLLE-AGFQFQYPDLDEAL  292 (292)
T ss_pred             cHHHHh-cCCeeeCcChhhcC
Confidence            899875 9999998 577753

This model represents a clade of proteins of unknown function including the E. coli yfcH protein.

>COG1089 Gmd GDP-D-mannose dehydratase [Cell envelope biogenesis, outer membrane]

Probab=99.81  E-value=1.7e-18  Score=154.92  Aligned_cols=223  Identities=24%  Similarity=0.224  Sum_probs=163.7

Q ss_pred             CCeEEEEcCCChhHHHHHHHHHHcCCceEEEEecCCCCcccc--------cccCCCeEEEEcc-----------------
Q 017760           11 GKTFLVTGGLGHVGSALCLELVRRGAYQVRAFDLRTNSPWSH--------LLINHGVHCIQGL-----------------   65 (366)
Q Consensus        11 ~~~VlITGgtGfiG~~L~~~L~~~g~~~V~~~dr~~~~~~~~--------~~~~~~v~~i~gD-----------------   65 (366)
                      +++.||||-||+-|++|++.|+++|+ +|+++.|+.+..+..        ....+.++++.||                 
T Consensus         2 ~K~ALITGITGQDGsYLa~lLLekGY-~VhGi~Rrss~~n~~ri~L~~~~~~~~~~l~l~~gDLtD~~~l~r~l~~v~Pd   80 (345)
T COG1089           2 GKVALITGITGQDGSYLAELLLEKGY-EVHGIKRRSSSFNTPRIHLYEDPHLNDPRLHLHYGDLTDSSNLLRILEEVQPD   80 (345)
T ss_pred             CceEEEecccCCchHHHHHHHHhcCc-EEEEEeeccccCCcccceeccccccCCceeEEEeccccchHHHHHHHHhcCch
Confidence            47789999999999999999999995 999999986544332        1223458899999                 


Q ss_pred             --------------------------------------------------------------------------------
Q 017760           66 --------------------------------------------------------------------------------   65 (366)
Q Consensus        66 --------------------------------------------------------------------------------   65 (366)
                                                                                                      
T Consensus        81 EIYNLaAQS~V~vSFe~P~~T~~~~~iGtlrlLEaiR~~~~~~~rfYQAStSE~fG~v~~~pq~E~TPFyPrSPYAvAKl  160 (345)
T COG1089          81 EIYNLAAQSHVGVSFEQPEYTADVDAIGTLRLLEAIRILGEKKTRFYQASTSELYGLVQEIPQKETTPFYPRSPYAVAKL  160 (345)
T ss_pred             hheeccccccccccccCcceeeeechhHHHHHHHHHHHhCCcccEEEecccHHhhcCcccCccccCCCCCCCCHHHHHHH
Confidence                                                                                            


Q ss_pred             -------ccCCCCCceEEEEeCCccccCCCC-----CCHHHHHHHHHcCCC-CeeecCCCcceeceeHHHHHHHHHHHHh
Q 017760           66 -------RKNNRKCLYTCAVRPAAIYGPGEE-----RHLPRIVSLAKLGLV-PFKIGEPSVKTDWIYVDNLVLALILASM  132 (366)
Q Consensus        66 -------ks~~~~~l~~~ilRp~~iyGp~~~-----~~l~~~i~~~~~g~~-~~~~g~~~~~~~~v~vdDla~a~~~a~~  132 (366)
                             ...+.+++.+|.=+..+--+|...     +.+.+.+..++.|.. ....|+-++++||-|+.|.|+++.++++
T Consensus       161 Ya~W~tvNYResYgl~AcnGILFNHESP~Rge~FVTRKIt~ava~Ik~G~q~~l~lGNldAkRDWG~A~DYVe~mwlmLQ  240 (345)
T COG1089         161 YAYWITVNYRESYGLFACNGILFNHESPLRGETFVTRKITRAVARIKLGLQDKLYLGNLDAKRDWGHAKDYVEAMWLMLQ  240 (345)
T ss_pred             HHHheeeehHhhcCceeecceeecCCCCCCccceehHHHHHHHHHHHccccceEEeccccccccccchHHHHHHHHHHHc
Confidence                   125667888888777777777542     335566667777753 4567999999999999999999999997


Q ss_pred             ccccCCCCCCCCCCCCCccEEecCCCCCCHHHHHHHHHHhcCCCCCccccCHHHHHHHHHHHHHHHHhhhhccccccCCC
Q 017760          133 GLLDDIPGQKGRPIASGQPYFVSDGFPINTFEFIGPLLKTLDYDLPKSWLAVPHALFLGKVFSFFYSVLYPWLNRWWLPQ  212 (366)
Q Consensus       133 ~l~~~~~~~~~~~~~~g~~y~I~~~~~vs~~e~~~~l~~~lg~~~~~~~lp~~~~~~~a~~~e~~~~~~~~~~~~~~~~~  212 (366)
                      +             ..++.|.|+.|+..|++||++...+..|.+....---....-        ...-.+..+  --+.+
T Consensus       241 q-------------~~PddyViATg~t~sVrefv~~Af~~~g~~l~w~g~g~~e~g--------~da~~G~~~--V~idp  297 (345)
T COG1089         241 Q-------------EEPDDYVIATGETHSVREFVELAFEMVGIDLEWEGTGVDEKG--------VDAKTGKII--VEIDP  297 (345)
T ss_pred             c-------------CCCCceEEecCceeeHHHHHHHHHHHcCceEEEeeccccccc--------cccccCcee--EEECc
Confidence            3             236789999999999999999999999966432100000000        000000000  00256


Q ss_pred             CCCcHHhhhhhcccceecHHHHHHhcCCCCCCChHHHHHHHHHHHHhcc
Q 017760          213 PLILPAEVYKVGVTHYFSLLKAKDELCYVPIVSPREGMAATISYWQDRK  261 (366)
Q Consensus       213 p~l~~~ev~~~~~~~~~d~~ka~~~LG~~p~~~~~e~l~~~v~~~~~~~  261 (366)
                      ..++|.|+..+    .-|.+||+++|||+|.++++|-+++++++..+..
T Consensus       298 ~~fRPaEV~~L----lgdp~KA~~~LGW~~~~~~~elv~~Mv~~dl~~~  342 (345)
T COG1089         298 RYFRPAEVDLL----LGDPTKAKEKLGWRPEVSLEELVREMVEADLEAA  342 (345)
T ss_pred             cccCchhhhhh----cCCHHHHHHHcCCccccCHHHHHHHHHHHHHHHh
Confidence            67789998766    5699999999999999999999999999876643

>PLN02686 cinnamoyl-CoA reductase

Probab=99.78  E-value=1.6e-18  Score=167.94  Aligned_cols=127  Identities=13%  Similarity=-0.004  Sum_probs=87.3

Q ss_pred             CceEEEEeCCccccCCCCCCHHHHHHHHHcCCCCeeecCCCcceeceeHHHHHHHHHHHHhccccCCCCCCCCCCCCCcc
Q 017760           72 CLYTCAVRPAAIYGPGEERHLPRIVSLAKLGLVPFKIGEPSVKTDWIYVDNLVLALILASMGLLDDIPGQKGRPIASGQP  151 (366)
Q Consensus        72 ~l~~~ilRp~~iyGp~~~~~l~~~i~~~~~g~~~~~~g~~~~~~~~v~vdDla~a~~~a~~~l~~~~~~~~~~~~~~g~~  151 (366)
                      +++++++||++||||++....+..+..+.+|. ..++|++.  ++|+||+|+|+|+++++++.         .+...++.
T Consensus       235 gl~~v~lRp~~vyGp~~~~~~~~~~~~~~~g~-~~~~g~g~--~~~v~V~Dva~A~~~al~~~---------~~~~~~~~  302 (367)
T PLN02686        235 GLKLATICPALVTGPGFFRRNSTATIAYLKGA-QEMLADGL--LATADVERLAEAHVCVYEAM---------GNKTAFGR  302 (367)
T ss_pred             CceEEEEcCCceECCCCCCCCChhHHHHhcCC-CccCCCCC--cCeEEHHHHHHHHHHHHhcc---------CCCCCCCc
Confidence            67899999999999986432222222344554 34566654  57999999999999999731         01234667


Q ss_pred             EEecCCCCCCHHHHHHHHHHhcCCCCCccccCHHHHHHHHHHHHHHHHhhhhccccccCCCCCCcHHhhhhhcccceecH
Q 017760          152 YFVSDGFPINTFEFIGPLLKTLDYDLPKSWLAVPHALFLGKVFSFFYSVLYPWLNRWWLPQPLILPAEVYKVGVTHYFSL  231 (366)
Q Consensus       152 y~I~~~~~vs~~e~~~~l~~~lg~~~~~~~lp~~~~~~~a~~~e~~~~~~~~~~~~~~~~~p~l~~~ev~~~~~~~~~d~  231 (366)
                      | +++++++++.|+++.+.+.+|.+.+....|                              .-.+.+.    .....|+
T Consensus       303 y-i~~g~~~s~~e~~~~i~~~~g~~~~~~~~~------------------------------~~~~~d~----~~~~~d~  347 (367)
T PLN02686        303 Y-ICFDHVVSREDEAEELARQIGLPINKIAGN------------------------------SSSDDTP----ARFELSN  347 (367)
T ss_pred             E-EEeCCCccHHHHHHHHHHHcCCCCCcCCCc------------------------------hhhcCCc----ccccccH
Confidence            8 888899999999999999999764432211                              0001111    1225699


Q ss_pred             HHHHHhcCCCCCCC
Q 017760          232 LKAKDELCYVPIVS  245 (366)
Q Consensus       232 ~ka~~~LG~~p~~~  245 (366)
                      +|++++|||+|+-.
T Consensus       348 ~kl~~~l~~~~~~~  361 (367)
T PLN02686        348 KKLSRLMSRTRRCC  361 (367)
T ss_pred             HHHHHHHHHhhhcc
Confidence            99999999999743

>PLN02657 3,8-divinyl protochlorophyllide a 8-vinyl reductase

Probab=99.77  E-value=2.5e-17  Score=160.68  Aligned_cols=176  Identities=19%  Similarity=0.148  Sum_probs=134.7

Q ss_pred             ccCCeEEEEcCCChhHHHHHHHHHHcCCceEEEEecCCCCccc----cc--ccCCCeEEEEcc-----------------
Q 017760            9 IEGKTFLVTGGLGHVGSALCLELVRRGAYQVRAFDLRTNSPWS----HL--LINHGVHCIQGL-----------------   65 (366)
Q Consensus         9 ~~~~~VlITGgtGfiG~~L~~~L~~~g~~~V~~~dr~~~~~~~----~~--~~~~~v~~i~gD-----------------   65 (366)
                      .++++|+|||||||+|+++++.|+++| ++|++++|+......    ..  ...++++++++|                 
T Consensus        58 ~~~~kVLVtGatG~IG~~l~~~Ll~~G-~~V~~l~R~~~~~~~~~~~~~~~~~~~~v~~v~~Dl~d~~~l~~~~~~~~~~  136 (390)
T PLN02657         58 PKDVTVLVVGATGYIGKFVVRELVRRG-YNVVAVAREKSGIRGKNGKEDTKKELPGAEVVFGDVTDADSLRKVLFSEGDP  136 (390)
T ss_pred             CCCCEEEEECCCcHHHHHHHHHHHHCC-CEEEEEEechhhccccchhhHHhhhcCCceEEEeeCCCHHHHHHHHHHhCCC
Confidence            456899999999999999999999999 599999987632110    00  001123333333                 


Q ss_pred             -----------------------------------------------------------cc-------CCCCCceEEEEe
Q 017760           66 -----------------------------------------------------------RK-------NNRKCLYTCAVR   79 (366)
Q Consensus        66 -----------------------------------------------------------ks-------~~~~~l~~~ilR   79 (366)
                                                                                 |.       ....+++++++|
T Consensus       137 ~D~Vi~~aa~~~~~~~~~~~vn~~~~~~ll~aa~~~gv~r~V~iSS~~v~~p~~~~~~sK~~~E~~l~~~~~gl~~tIlR  216 (390)
T PLN02657        137 VDVVVSCLASRTGGVKDSWKIDYQATKNSLDAGREVGAKHFVLLSAICVQKPLLEFQRAKLKFEAELQALDSDFTYSIVR  216 (390)
T ss_pred             CcEEEECCccCCCCCccchhhHHHHHHHHHHHHHHcCCCEEEEEeeccccCcchHHHHHHHHHHHHHHhccCCCCEEEEc
Confidence                                                                       00       124789999999


Q ss_pred             CCccccCCCCCCHHHHHHHHHcCCCCeeecCCCcce-eceeHHHHHHHHHHHHhccccCCCCCCCCCCCCCccEEecCC-
Q 017760           80 PAAIYGPGEERHLPRIVSLAKLGLVPFKIGEPSVKT-DWIYVDNLVLALILASMGLLDDIPGQKGRPIASGQPYFVSDG-  157 (366)
Q Consensus        80 p~~iyGp~~~~~l~~~i~~~~~g~~~~~~g~~~~~~-~~v~vdDla~a~~~a~~~l~~~~~~~~~~~~~~g~~y~I~~~-  157 (366)
                      |+.+||+.     ...+..+.+|....++|+++..+ ++||++|+|+++..+++           .+...+++|||+++ 
T Consensus       217 p~~~~~~~-----~~~~~~~~~g~~~~~~GdG~~~~~~~I~v~DlA~~i~~~~~-----------~~~~~~~~~~Iggp~  280 (390)
T PLN02657        217 PTAFFKSL-----GGQVEIVKDGGPYVMFGDGKLCACKPISEADLASFIADCVL-----------DESKINKVLPIGGPG  280 (390)
T ss_pred             cHHHhccc-----HHHHHhhccCCceEEecCCcccccCceeHHHHHHHHHHHHh-----------CccccCCEEEcCCCC
Confidence            99999852     33556677788777789887654 68999999999999986           44456789999985 


Q ss_pred             CCCCHHHHHHHHHHhcCCCCCccccCHHHHHHHHHHHHHHHHhh
Q 017760          158 FPINTFEFIGPLLKTLDYDLPKSWLAVPHALFLGKVFSFFYSVL  201 (366)
Q Consensus       158 ~~vs~~e~~~~l~~~lg~~~~~~~lp~~~~~~~a~~~e~~~~~~  201 (366)
                      +.+|+.|+++.+.+.+|.+.+...+|.+....++++.+.+..++
T Consensus       281 ~~~S~~Eia~~l~~~lG~~~~~~~vp~~~~~~~~~~~~~~~~~~  324 (390)
T PLN02657        281 KALTPLEQGEMLFRILGKEPKFFKVPIQIMDFAIGVLDFLAKIF  324 (390)
T ss_pred             cccCHHHHHHHHHHHhCCCCceEEcCHHHHHHHHHHHHHhhhhC
Confidence            68999999999999999988888999999988888887776655

>KOG1371 consensus UDP-glucose 4-epimerase/UDP-sulfoquinovose synthase [Cell wall/membrane/envelope biogenesis]

Probab=99.77  E-value=4.1e-18  Score=155.73  Aligned_cols=207  Identities=25%  Similarity=0.282  Sum_probs=151.6

Q ss_pred             CCeEEEEcCCChhHHHHHHHHHHcCCceEEEEecCCCCcc-----cccccC--CCeEEEEcc------------------
Q 017760           11 GKTFLVTGGLGHVGSALCLELVRRGAYQVRAFDLRTNSPW-----SHLLIN--HGVHCIQGL------------------   65 (366)
Q Consensus        11 ~~~VlITGgtGfiG~~L~~~L~~~g~~~V~~~dr~~~~~~-----~~~~~~--~~v~~i~gD------------------   65 (366)
                      .++||||||+||+|+|.+.+|+++|+ .|.++|.-.....     ..++..  ..+.++++|                  
T Consensus         2 ~~~VLVtGgaGyiGsht~l~L~~~gy-~v~~vDNl~n~~~~sl~r~~~l~~~~~~v~f~~~Dl~D~~~L~kvF~~~~fd~   80 (343)
T KOG1371|consen    2 GKHVLVTGGAGYIGSHTVLALLKRGY-GVVIVDNLNNSYLESLKRVRQLLGEGKSVFFVEGDLNDAEALEKLFSEVKFDA   80 (343)
T ss_pred             CcEEEEecCCcceehHHHHHHHhCCC-cEEEEecccccchhHHHHHHHhcCCCCceEEEEeccCCHHHHHHHHhhcCCce
Confidence            46899999999999999999999995 9999987543221     122223  789999999                  


Q ss_pred             ----------------------------------------------------------------------------cc--
Q 017760           66 ----------------------------------------------------------------------------RK--   67 (366)
Q Consensus        66 ----------------------------------------------------------------------------ks--   67 (366)
                                                                                                  |.  
T Consensus        81 V~Hfa~~~~vgeS~~~p~~Y~~nNi~gtlnlLe~~~~~~~~~~V~sssatvYG~p~~ip~te~~~t~~p~~pyg~tK~~i  160 (343)
T KOG1371|consen   81 VMHFAALAAVGESMENPLSYYHNNIAGTLNLLEVMKAHNVKALVFSSSATVYGLPTKVPITEEDPTDQPTNPYGKTKKAI  160 (343)
T ss_pred             EEeehhhhccchhhhCchhheehhhhhHHHHHHHHHHcCCceEEEecceeeecCcceeeccCcCCCCCCCCcchhhhHHH
Confidence                                                                                        00  


Q ss_pred             -------CCCCCceEEEEeCCcccc--CC----CC------CCHHHHHHHH--------HcCCCCeeecCCCcceeceeH
Q 017760           68 -------NNRKCLYTCAVRPAAIYG--PG----EE------RHLPRIVSLA--------KLGLVPFKIGEPSVKTDWIYV  120 (366)
Q Consensus        68 -------~~~~~l~~~ilRp~~iyG--p~----~~------~~l~~~i~~~--------~~g~~~~~~g~~~~~~~~v~v  120 (366)
                             .....+..+.||..+++|  |.    +.      +.+|...+.+        ..|.. +...||+..++++|+
T Consensus       161 E~i~~d~~~~~~~~~~~LRyfn~~ga~p~Gr~ge~p~~~~nnl~p~v~~vaigr~~~l~v~g~d-~~t~dgt~vrdyi~v  239 (343)
T KOG1371|consen  161 EEIIHDYNKAYGWKVTGLRYFNVIGAHPSGRIGEAPLGIPNNLLPYVFQVAIGRRPNLQVVGRD-YTTIDGTIVRDYIHV  239 (343)
T ss_pred             HHHHHhhhccccceEEEEEeccccCccccCccCCCCccCcccccccccchhhcccccceeecCc-ccccCCCeeecceee
Confidence                   333458899999999999  32    21      2233222211        12222 233466899999999


Q ss_pred             HHHHHHHHHHHhccccCCCCCCCCCCCCCccEEecCCCCCCHHHHHHHHHHhcCCCCCccccCHHHHHHHHHHHHHHHHh
Q 017760          121 DNLVLALILASMGLLDDIPGQKGRPIASGQPYFVSDGFPINTFEFIGPLLKTLDYDLPKSWLAVPHALFLGKVFSFFYSV  200 (366)
Q Consensus       121 dDla~a~~~a~~~l~~~~~~~~~~~~~~g~~y~I~~~~~vs~~e~~~~l~~~lg~~~~~~~lp~~~~~~~a~~~e~~~~~  200 (366)
                      -|+|++++.|+.++...         ..-++||++.+...++.|+...+++.+|.+.+...+|                 
T Consensus       240 ~Dla~~h~~al~k~~~~---------~~~~i~Nlgtg~g~~V~~lv~a~~k~~g~~~k~~~v~-----------------  293 (343)
T KOG1371|consen  240 LDLADGHVAALGKLRGA---------AEFGVYNLGTGKGSSVLELVTAFEKALGVKIKKKVVP-----------------  293 (343)
T ss_pred             EehHHHHHHHhhccccc---------hheeeEeecCCCCccHHHHHHHHHHHhcCCCCccccC-----------------
Confidence            99999999999864331         2334999999999999999999999999887654321                 


Q ss_pred             hhhccccccCCCCCCcHHhhhhhcccceecHHHHHHhcCCCCCCChHHHHHHHHHHHHhcccc
Q 017760          201 LYPWLNRWWLPQPLILPAEVYKVGVTHYFSLLKAKDELCYVPIVSPREGMAATISYWQDRKRK  263 (366)
Q Consensus       201 ~~~~~~~~~~~~p~l~~~ev~~~~~~~~~d~~ka~~~LG~~p~~~~~e~l~~~v~~~~~~~~~  263 (366)
                                   . ++.++.    ..+.+.+++++||||+|.++++|++++...|..++..+
T Consensus       294 -------------~-R~gdv~----~~ya~~~~a~~elgwk~~~~iee~c~dlw~W~~~np~g  338 (343)
T KOG1371|consen  294 -------------R-RNGDVA----FVYANPSKAQRELGWKAKYGLQEMLKDLWRWQKQNPSG  338 (343)
T ss_pred             -------------C-CCCCce----eeeeChHHHHHHhCCccccCHHHHHHHHHHHHhcCCCc
Confidence                         1 222221    22678999999999999999999999999999887654

>PF04321 RmlD_sub_bind: RmlD substrate binding domain; InterPro: IPR005913 dTDP-4-dehydrorhamnose reductase (1

Probab=99.77  E-value=2.9e-19  Score=167.18  Aligned_cols=204  Identities=21%  Similarity=0.202  Sum_probs=133.6

Q ss_pred             CeEEEEcCCChhHHHHHHHHHHcCCceEEEEecCCCCccc-ccc------cCCCeEEEEc-----c--------------
Q 017760           12 KTFLVTGGLGHVGSALCLELVRRGAYQVRAFDLRTNSPWS-HLL------INHGVHCIQG-----L--------------   65 (366)
Q Consensus        12 ~~VlITGgtGfiG~~L~~~L~~~g~~~V~~~dr~~~~~~~-~~~------~~~~v~~i~g-----D--------------   65 (366)
                      ||||||||+|++|++|.+.|.++| ++|+++++..-.-.. ..+      ..+++-+..+     |              
T Consensus         1 MriLI~GasG~lG~~l~~~l~~~~-~~v~~~~r~~~dl~d~~~~~~~~~~~~pd~Vin~aa~~~~~~ce~~p~~a~~iN~   79 (286)
T PF04321_consen    1 MRILITGASGFLGSALARALKERG-YEVIATSRSDLDLTDPEAVAKLLEAFKPDVVINCAAYTNVDACEKNPEEAYAINV   79 (286)
T ss_dssp             EEEEEETTTSHHHHHHHHHHTTTS-EEEEEESTTCS-TTSHHHHHHHHHHH--SEEEE------HHHHHHSHHHHHHHHT
T ss_pred             CEEEEECCCCHHHHHHHHHHhhCC-CEEEEeCchhcCCCCHHHHHHHHHHhCCCeEeccceeecHHhhhhChhhhHHHhh
Confidence            689999999999999999999999 589999766321111 000      0133333332     1              


Q ss_pred             -------------------------------------------------cc-----CCCCCceEEEEeCCccccCCCCCC
Q 017760           66 -------------------------------------------------RK-----NNRKCLYTCAVRPAAIYGPGEERH   91 (366)
Q Consensus        66 -------------------------------------------------ks-----~~~~~l~~~ilRp~~iyGp~~~~~   91 (366)
                                                                       |.     ..+...+++|+|++.+||+...++
T Consensus        80 ~~~~~la~~~~~~~~~li~~STd~VFdG~~~~~y~E~d~~~P~~~YG~~K~~~E~~v~~~~~~~~IlR~~~~~g~~~~~~  159 (286)
T PF04321_consen   80 DATKNLAEACKERGARLIHISTDYVFDGDKGGPYTEDDPPNPLNVYGRSKLEGEQAVRAACPNALILRTSWVYGPSGRNF  159 (286)
T ss_dssp             HHHHHHHHHHHHCT-EEEEEEEGGGS-SSTSSSB-TTS----SSHHHHHHHHHHHHHHHH-SSEEEEEE-SEESSSSSSH
T ss_pred             HHHHHHHHHHHHcCCcEEEeeccEEEcCCcccccccCCCCCCCCHHHHHHHHHHHHHHHhcCCEEEEecceecccCCCch
Confidence                                                             00     111233799999999999977788


Q ss_pred             HHHHHHHHHcCCCCeeecCCCcceeceeHHHHHHHHHHHHhccccCCCCCCCCCCCCCccEEecCCCCCCHHHHHHHHHH
Q 017760           92 LPRIVSLAKLGLVPFKIGEPSVKTDWIYVDNLVLALILASMGLLDDIPGQKGRPIASGQPYFVSDGFPINTFEFIGPLLK  171 (366)
Q Consensus        92 l~~~i~~~~~g~~~~~~g~~~~~~~~v~vdDla~a~~~a~~~l~~~~~~~~~~~~~~g~~y~I~~~~~vs~~e~~~~l~~  171 (366)
                      +..+++.+.+++.+..+.|  ..++++|++|+|+++..++++-..+        ....++||+++++.+|.+||++.+++
T Consensus       160 ~~~~~~~~~~~~~i~~~~d--~~~~p~~~~dlA~~i~~l~~~~~~~--------~~~~Giyh~~~~~~~S~~e~~~~i~~  229 (286)
T PF04321_consen  160 LRWLLRRLRQGEPIKLFDD--QYRSPTYVDDLARVILELIEKNLSG--------ASPWGIYHLSGPERVSRYEFAEAIAK  229 (286)
T ss_dssp             HHHHHHHHHCTSEEEEESS--CEE--EEHHHHHHHHHHHHHHHHH---------GGG-EEEE---BS-EEHHHHHHHHHH
T ss_pred             hhhHHHHHhcCCeeEeeCC--ceeCCEEHHHHHHHHHHHHHhcccc--------cccceeEEEecCcccCHHHHHHHHHH
Confidence            8999999999998776654  6789999999999999999852221        12357999999999999999999999


Q ss_pred             hcCCCCCcc-ccCHHHHHHHHHHHHHHHHhhhhccccccCCCCCCcHHhhhhhcccceecHHHHHHhcCCCCCCChHHHH
Q 017760          172 TLDYDLPKS-WLAVPHALFLGKVFSFFYSVLYPWLNRWWLPQPLILPAEVYKVGVTHYFSLLKAKDELCYVPIVSPREGM  250 (366)
Q Consensus       172 ~lg~~~~~~-~lp~~~~~~~a~~~e~~~~~~~~~~~~~~~~~p~l~~~ev~~~~~~~~~d~~ka~~~LG~~p~~~~~e~l  250 (366)
                      .+|.+.+.+ .++                            .......  .....+..+|++|+++.+|.+|. +++++|
T Consensus       230 ~~~~~~~~i~~~~----------------------------~~~~~~~--~~rp~~~~L~~~kl~~~~g~~~~-~~~~~l  278 (286)
T PF04321_consen  230 ILGLDPELIKPVS----------------------------SSEFPRA--APRPRNTSLDCRKLKNLLGIKPP-PWREGL  278 (286)
T ss_dssp             HHTHCTTEEEEES----------------------------STTSTTS--SGS-SBE-B--HHHHHCTTS----BHHHHH
T ss_pred             HhCCCCceEEecc----------------------------cccCCCC--CCCCCcccccHHHHHHccCCCCc-CHHHHH
Confidence            999886332 111                            1111111  11122446899999999999996 899999


Q ss_pred             HHHHHHH
Q 017760          251 AATISYW  257 (366)
Q Consensus       251 ~~~v~~~  257 (366)
                      +++++.|
T Consensus       279 ~~~~~~~  285 (286)
T PF04321_consen  279 EELVKQY  285 (286)
T ss_dssp             HHHHHHH
T ss_pred             HHHHHHh
Confidence            9999765

1.1.133 from EC) catalyzes the last of 4 steps in making dTDP-rhamnose, a precursor of LPS molecules such as core antigen and O-antigen. dTDP-6-deoxy-L-mannose + NADP+ = dTDP-4-dehydro-6-deoxy-L-mannose + NADPH ; GO: 0008831 dTDP-4-dehydrorhamnose reductase activity, 0045226 extracellular polysaccharide biosynthetic process; PDB: 2YDX_D 2YDY_A 3SC6_C 1VL0_B 2GGS_A 1KBZ_A 1KC3_A 1KC1_A 1N2S_A.

>KOG1431 consensus GDP-L-fucose synthetase [Carbohydrate transport and metabolism; Posttranslational modification, protein turnover, chaperones]

Probab=99.76  E-value=1.2e-17  Score=144.57  Aligned_cols=148  Identities=17%  Similarity=0.212  Sum_probs=112.6

Q ss_pred             CCCCCceEEEEeCCccccCCCC------CCHHHHHHHH----HcCC-CCeeecCCCcceeceeHHHHHHHHHHHHhcccc
Q 017760           68 NNRKCLYTCAVRPAAIYGPGEE------RHLPRIVSLA----KLGL-VPFKIGEPSVKTDWIYVDNLVLALILASMGLLD  136 (366)
Q Consensus        68 ~~~~~l~~~ilRp~~iyGp~~~------~~l~~~i~~~----~~g~-~~~~~g~~~~~~~~v~vdDla~a~~~a~~~l~~  136 (366)
                      ..+++..++..-|+++|||.+.      +.+|.++..+    .+|- .+.++|.|...++|+|++|+|++.+..++.   
T Consensus       151 ~~qhg~~~tsviPtNvfGphDNfnpe~sHVlPali~r~h~ak~~gtd~~~VwGsG~PlRqFiys~DLA~l~i~vlr~---  227 (315)
T KOG1431|consen  151 RQQHGRDYTSVIPTNVFGPHDNFNPENSHVLPALIHRFHEAKRNGTDELTVWGSGSPLRQFIYSDDLADLFIWVLRE---  227 (315)
T ss_pred             HHHhCCceeeeccccccCCCCCCCcccccchHHHHHHHHHHHhcCCceEEEecCCChHHHHhhHhHHHHHHHHHHHh---
Confidence            4567888999999999999874      4566665543    4554 567889999999999999999999999962   


Q ss_pred             CCCCCCCCCCCCCccEEecCCC--CCCHHHHHHHHHHhcCCCCCccccCHHHHHHHHHHHHHHHHhhhhccccccCCCCC
Q 017760          137 DIPGQKGRPIASGQPYFVSDGF--PINTFEFIGPLLKTLDYDLPKSWLAVPHALFLGKVFSFFYSVLYPWLNRWWLPQPL  214 (366)
Q Consensus       137 ~~~~~~~~~~~~g~~y~I~~~~--~vs~~e~~~~l~~~lg~~~~~~~lp~~~~~~~a~~~e~~~~~~~~~~~~~~~~~p~  214 (366)
                               -..-+..+++.|+  .+|.+|.++.+.+..+++.+...-                            -..+
T Consensus       228 ---------Y~~vEpiils~ge~~EVtI~e~aeaV~ea~~F~G~l~~D----------------------------ttK~  270 (315)
T KOG1431|consen  228 ---------YEGVEPIILSVGESDEVTIREAAEAVVEAVDFTGKLVWD----------------------------TTKS  270 (315)
T ss_pred             ---------hcCccceEeccCccceeEHHHHHHHHHHHhCCCceEEee----------------------------ccCC
Confidence                     2234678888887  799999999999999988653210                            0000


Q ss_pred             CcHHhhhhhcccceecHHHHHHhcCCCCCCC-hHHHHHHHHHHHHhcccc
Q 017760          215 ILPAEVYKVGVTHYFSLLKAKDELCYVPIVS-PREGMAATISYWQDRKRK  263 (366)
Q Consensus       215 l~~~ev~~~~~~~~~d~~ka~~~LG~~p~~~-~~e~l~~~v~~~~~~~~~  263 (366)
                      -  .+.+     ...|++|++. |+|.|+.+ +++++.++++||.++-..
T Consensus       271 D--Gq~k-----KtasnsKL~s-l~pd~~ft~l~~ai~~t~~Wy~~Ny~q  312 (315)
T KOG1431|consen  271 D--GQFK-----KTASNSKLRS-LLPDFKFTPLEQAISETVQWYLDNYEQ  312 (315)
T ss_pred             C--CCcc-----cccchHHHHH-hCCCcccChHHHHHHHHHHHHHHhHHh
Confidence            0  0111     1479999988 99999986 999999999999886543

>PF01370 Epimerase: NAD dependent epimerase/dehydratase family; InterPro: IPR001509 This family of proteins utilise NAD as a cofactor

Probab=99.72  E-value=2e-17  Score=149.60  Aligned_cols=129  Identities=30%  Similarity=0.428  Sum_probs=105.0

Q ss_pred             EEEEcCCChhHHHHHHHHHHcCCceEEEEecCCCCcccccccCCCeEEEEcc----------------------------
Q 017760           14 FLVTGGLGHVGSALCLELVRRGAYQVRAFDLRTNSPWSHLLINHGVHCIQGL----------------------------   65 (366)
Q Consensus        14 VlITGgtGfiG~~L~~~L~~~g~~~V~~~dr~~~~~~~~~~~~~~v~~i~gD----------------------------   65 (366)
                      |+||||+||+|++++++|+++| ++|+.+.+++........ ..+++++.+|                            
T Consensus         1 IlI~GatG~iG~~l~~~l~~~g-~~v~~~~~~~~~~~~~~~-~~~~~~~~~dl~~~~~~~~~~~~~~~d~vi~~a~~~~~   78 (236)
T PF01370_consen    1 ILITGATGFIGSALVRQLLKKG-HEVIVLSRSSNSESFEEK-KLNVEFVIGDLTDKEQLEKLLEKANIDVVIHLAAFSSN   78 (236)
T ss_dssp             EEEETTTSHHHHHHHHHHHHTT-TEEEEEESCSTGGHHHHH-HTTEEEEESETTSHHHHHHHHHHHTESEEEEEBSSSSH
T ss_pred             EEEEccCCHHHHHHHHHHHHcC-Cccccccccccccccccc-cceEEEEEeeccccccccccccccCceEEEEeeccccc
Confidence            7999999999999999999999 589988888765432111 1156666666                            


Q ss_pred             --------------------------------------------------------------------------ccCCCC
Q 017760           66 --------------------------------------------------------------------------RKNNRK   71 (366)
Q Consensus        66 --------------------------------------------------------------------------ks~~~~   71 (366)
                                                                                                ...+..
T Consensus        79 ~~~~~~~~~~~~~n~~~~~~ll~~~~~~~~~~~i~~sS~~~y~~~~~~~~~e~~~~~~~~~Y~~~K~~~e~~~~~~~~~~  158 (236)
T PF01370_consen   79 PESFEDPEEIIEANVQGTRNLLEAAREAGVKRFIFLSSASVYGDPDGEPIDEDSPINPLSPYGASKRAAEELLRDYAKKY  158 (236)
T ss_dssp             HHHHHSHHHHHHHHHHHHHHHHHHHHHHTTSEEEEEEEGGGGTSSSSSSBETTSGCCHSSHHHHHHHHHHHHHHHHHHHH
T ss_pred             cccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccc
Confidence                                                                                      002234


Q ss_pred             CceEEEEeCCccccCC-----CCCCHHHHHHHHHcCCCCeeecCCCcceeceeHHHHHHHHHHHHhccccCCCCCCCCCC
Q 017760           72 CLYTCAVRPAAIYGPG-----EERHLPRIVSLAKLGLVPFKIGEPSVKTDWIYVDNLVLALILASMGLLDDIPGQKGRPI  146 (366)
Q Consensus        72 ~l~~~ilRp~~iyGp~-----~~~~l~~~i~~~~~g~~~~~~g~~~~~~~~v~vdDla~a~~~a~~~l~~~~~~~~~~~~  146 (366)
                      +++++++||+.+|||+     ..+.++.++..+.+|+.+.+++++++.++++|++|+|++++.++++           +.
T Consensus       159 ~~~~~~~R~~~vyG~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~v~D~a~~~~~~~~~-----------~~  227 (236)
T PF01370_consen  159 GLRVTILRPPNVYGPGNPNNNSSSFLPSLIRQALKGKPIKIPGDGSQVRDFIHVDDLAEAIVAALEN-----------PK  227 (236)
T ss_dssp             TSEEEEEEESEEESTTSSSSSTSSHHHHHHHHHHTTSSEEEESTSSCEEEEEEHHHHHHHHHHHHHH-----------SC
T ss_pred             ccccccccccccccccccccccccccchhhHHhhcCCcccccCCCCCccceEEHHHHHHHHHHHHhC-----------CC
Confidence            8899999999999999     2467889999999999888899999999999999999999999983           34


Q ss_pred             CCCccEEec
Q 017760          147 ASGQPYFVS  155 (366)
Q Consensus       147 ~~g~~y~I~  155 (366)
                      ..+++|||+
T Consensus       228 ~~~~~yNig  236 (236)
T PF01370_consen  228 AAGGIYNIG  236 (236)
T ss_dssp             TTTEEEEES
T ss_pred             CCCCEEEeC
Confidence            678999985

The proteins in this family use nucleotide-sugar substrates for a variety of chemical reactions []. It contains the NAD(P)- binding domain (IPR016040 from INTERPRO) which is a commonly found domain with a core Rossmann-type fold. One of the best studied of these proteins is UDP-galactose 4-epimerase which catalyses the conversion of UDP-galactose to UDP-glucose during galactose metabolism [, ].; GO: 0003824 catalytic activity, 0050662 coenzyme binding, 0044237 cellular metabolic process; PDB: 2NNL_D 3C1T_B 3BXX_C 2IOD_C 2X4G_A 2Q1W_B 3SLG_B 1R66_A 1R6D_A 1KEU_B ....

>TIGR03649 ergot_EASG ergot alkaloid biosynthesis protein, AFUA_2G17970 family

Probab=99.68  E-value=5e-16  Score=145.13  Aligned_cols=159  Identities=14%  Similarity=0.072  Sum_probs=111.7

Q ss_pred             eEEEEcCCChhHHHHHHHHHHcCCceEEEEecCCCCcccc-------cccC--------------CC-eEEEE---cc--
Q 017760           13 TFLVTGGLGHVGSALCLELVRRGAYQVRAFDLRTNSPWSH-------LLIN--------------HG-VHCIQ---GL--   65 (366)
Q Consensus        13 ~VlITGgtGfiG~~L~~~L~~~g~~~V~~~dr~~~~~~~~-------~~~~--------------~~-v~~i~---gD--   65 (366)
                      +|+||||||++|++++++|+++| ++|++++|++......       +...              .+ ++.+.   ++  
T Consensus         1 ~ilVtGatG~iG~~vv~~L~~~g-~~V~~~~R~~~~~~~~~~~~~~~d~~d~~~l~~a~~~~~~~~g~~d~v~~~~~~~~   79 (285)
T TIGR03649         1 TILLTGGTGKTASRIARLLQAAS-VPFLVASRSSSSSAGPNEKHVKFDWLDEDTWDNPFSSDDGMEPEISAVYLVAPPIP   79 (285)
T ss_pred             CEEEEcCCChHHHHHHHHHHhCC-CcEEEEeCCCccccCCCCccccccCCCHHHHHHHHhcccCcCCceeEEEEeCCCCC
Confidence            58999999999999999999999 5999999986432100       0000              12 22221   11  


Q ss_pred             -----------------------cc-----------------CCC-CCceEEEEeCCccccCCCCCCHHHHHHHHHcCCC
Q 017760           66 -----------------------RK-----------------NNR-KCLYTCAVRPAAIYGPGEERHLPRIVSLAKLGLV  104 (366)
Q Consensus        66 -----------------------ks-----------------~~~-~~l~~~ilRp~~iyGp~~~~~l~~~i~~~~~g~~  104 (366)
                                             -|                 .+. .++++|++||+.+|+......   ....+..+..
T Consensus        80 ~~~~~~~~~i~aa~~~gv~~~V~~Ss~~~~~~~~~~~~~~~~l~~~~gi~~tilRp~~f~~~~~~~~---~~~~~~~~~~  156 (285)
T TIGR03649        80 DLAPPMIKFIDFARSKGVRRFVLLSASIIEKGGPAMGQVHAHLDSLGGVEYTVLRPTWFMENFSEEF---HVEAIRKENK  156 (285)
T ss_pred             ChhHHHHHHHHHHHHcCCCEEEEeeccccCCCCchHHHHHHHHHhccCCCEEEEeccHHhhhhcccc---cccccccCCe
Confidence                                   00                 112 489999999999886532111   1122222222


Q ss_pred             CeeecCCCcceeceeHHHHHHHHHHHHhccccCCCCCCCCCCCCCccEEecCCCCCCHHHHHHHHHHhcCCCCCccccCH
Q 017760          105 PFKIGEPSVKTDWIYVDNLVLALILASMGLLDDIPGQKGRPIASGQPYFVSDGFPINTFEFIGPLLKTLDYDLPKSWLAV  184 (366)
Q Consensus       105 ~~~~g~~~~~~~~v~vdDla~a~~~a~~~l~~~~~~~~~~~~~~g~~y~I~~~~~vs~~e~~~~l~~~lg~~~~~~~lp~  184 (366)
                       ...+.++...+|+|++|+++++..+++           .+...++.|++++++.+|+.|+++.+.+.+|++.+...+|.
T Consensus       157 -~~~~~g~~~~~~v~~~Dva~~~~~~l~-----------~~~~~~~~~~l~g~~~~s~~eia~~l~~~~g~~v~~~~~~~  224 (285)
T TIGR03649       157 -IYSATGDGKIPFVSADDIARVAYRALT-----------DKVAPNTDYVVLGPELLTYDDVAEILSRVLGRKITHVKLTE  224 (285)
T ss_pred             -EEecCCCCccCcccHHHHHHHHHHHhc-----------CCCcCCCeEEeeCCccCCHHHHHHHHHHHhCCceEEEeCCH
Confidence             334567788999999999999999986           44455789999999999999999999999999888777777


Q ss_pred             HHH
Q 017760          185 PHA  187 (366)
Q Consensus       185 ~~~  187 (366)
                      ...
T Consensus       225 ~~~  227 (285)
T TIGR03649       225 EEL  227 (285)
T ss_pred             HHH
Confidence            543

This family consists of fungal proteins of unknown function associated with secondary metabolite biosynthesis, such as of the ergot alkaloids such as ergovaline. Nomenclature differs because gene order differs - this is EasG in Neotyphodium lolii but is designated ergot alkaloid biosynthetic protein A in several other fungi.

>COG1091 RfbD dTDP-4-dehydrorhamnose reductase [Cell envelope biogenesis, outer membrane]

Probab=99.68  E-value=4.6e-16  Score=142.27  Aligned_cols=142  Identities=17%  Similarity=0.150  Sum_probs=108.9

Q ss_pred             CCCceEEEEeCCccccCCCCCCHHHHHHHHHcCCCCeeecCCCcceeceeHHHHHHHHHHHHhccccCCCCCCCCCCCCC
Q 017760           70 RKCLYTCAVRPAAIYGPGEERHLPRIVSLAKLGLVPFKIGEPSVKTDWIYVDNLVLALILASMGLLDDIPGQKGRPIASG  149 (366)
Q Consensus        70 ~~~l~~~ilRp~~iyGp~~~~~l~~~i~~~~~g~~~~~~g~~~~~~~~v~vdDla~a~~~a~~~l~~~~~~~~~~~~~~g  149 (366)
                      ..+.++.|+|.+++||....+++..+++..+.|+.+.++.|  +..+++++.|+|+++..+++.            ...+
T Consensus       137 ~~~~~~~I~Rtswv~g~~g~nFv~tml~la~~~~~l~vv~D--q~gsPt~~~dlA~~i~~ll~~------------~~~~  202 (281)
T COG1091         137 AAGPRHLILRTSWVYGEYGNNFVKTMLRLAKEGKELKVVDD--QYGSPTYTEDLADAILELLEK------------EKEG  202 (281)
T ss_pred             HhCCCEEEEEeeeeecCCCCCHHHHHHHHhhcCCceEEECC--eeeCCccHHHHHHHHHHHHhc------------cccC
Confidence            34577999999999999888888899999999998877755  889999999999999998863            3344


Q ss_pred             ccEEecCCCCCCHHHHHHHHHHhcCCCCCccc-cCHHHHHHHHHHHHHHHHhhhhccccccCCCCCCcHHhhhhhcccce
Q 017760          150 QPYFVSDGFPINTFEFIGPLLKTLDYDLPKSW-LAVPHALFLGKVFSFFYSVLYPWLNRWWLPQPLILPAEVYKVGVTHY  228 (366)
Q Consensus       150 ~~y~I~~~~~vs~~e~~~~l~~~lg~~~~~~~-lp~~~~~~~a~~~e~~~~~~~~~~~~~~~~~p~l~~~ev~~~~~~~~  228 (366)
                      .+||+++...+|++||++.+.+.++.+..... .+...                       .+.+.-+|.       +..
T Consensus       203 ~~yH~~~~g~~Swydfa~~I~~~~~~~~~v~~~~~~~~-----------------------~~~~a~RP~-------~S~  252 (281)
T COG1091         203 GVYHLVNSGECSWYEFAKAIFEEAGVDGEVIEPIASAE-----------------------YPTPAKRPA-------NSS  252 (281)
T ss_pred             cEEEEeCCCcccHHHHHHHHHHHhCCCccccccccccc-----------------------cCccCCCCc-------ccc
Confidence            49999999989999999999999997653221 11000                       011111111       124


Q ss_pred             ecHHHHHHhcCCCCCCChHHHHHHHHHH
Q 017760          229 FSLLKAKDELCYVPIVSPREGMAATISY  256 (366)
Q Consensus       229 ~d~~ka~~~LG~~p~~~~~e~l~~~v~~  256 (366)
                      +|+.|+++.+|+.|. +++++++++++.
T Consensus       253 L~~~k~~~~~g~~~~-~w~~~l~~~~~~  279 (281)
T COG1091         253 LDTKKLEKAFGLSLP-EWREALKALLDE  279 (281)
T ss_pred             cchHHHHHHhCCCCc-cHHHHHHHHHhh
Confidence            799999999999886 899999988764

>PRK12320 hypothetical protein; Provisional

Probab=99.64  E-value=4.5e-15  Score=152.08  Aligned_cols=136  Identities=18%  Similarity=0.112  Sum_probs=94.8

Q ss_pred             CeEEEEcCCChhHHHHHHHHHHcCCceEEEEecCCCCcccccccCCCeEEEEcc--------------------------
Q 017760           12 KTFLVTGGLGHVGSALCLELVRRGAYQVRAFDLRTNSPWSHLLINHGVHCIQGL--------------------------   65 (366)
Q Consensus        12 ~~VlITGgtGfiG~~L~~~L~~~g~~~V~~~dr~~~~~~~~~~~~~~v~~i~gD--------------------------   65 (366)
                      |||+||||+||+|++|++.|+++| ++|+++++.+...     ..++++++++|                          
T Consensus         1 MkILVTGAaGFIGs~La~~Ll~~G-~~Vi~ldr~~~~~-----~~~~ve~v~~Dl~d~~l~~al~~~D~VIHLAa~~~~~   74 (699)
T PRK12320          1 MQILVTDATGAVGRSVTRQLIAAG-HTVSGIAQHPHDA-----LDPRVDYVCASLRNPVLQELAGEADAVIHLAPVDTSA   74 (699)
T ss_pred             CEEEEECCCCHHHHHHHHHHHhCC-CEEEEEeCChhhc-----ccCCceEEEccCCCHHHHHHhcCCCEEEEcCccCccc
Confidence            479999999999999999999999 5999999864321     11233344333                          


Q ss_pred             -------------------------cc---------------CCCCCceEEEEeCCccccCCCCCCHHHHHHHHHcCCCC
Q 017760           66 -------------------------RK---------------NNRKCLYTCAVRPAAIYGPGEERHLPRIVSLAKLGLVP  105 (366)
Q Consensus        66 -------------------------ks---------------~~~~~l~~~ilRp~~iyGp~~~~~l~~~i~~~~~g~~~  105 (366)
                                               -|               ...++++++++|++++|||+......+++........ 
T Consensus        75 ~~~vNv~Gt~nLleAA~~~GvRiV~~SS~~G~~~~~~~aE~ll~~~~~p~~ILR~~nVYGp~~~~~~~r~I~~~l~~~~-  153 (699)
T PRK12320         75 PGGVGITGLAHVANAAARAGARLLFVSQAAGRPELYRQAETLVSTGWAPSLVIRIAPPVGRQLDWMVCRTVATLLRSKV-  153 (699)
T ss_pred             hhhHHHHHHHHHHHHHHHcCCeEEEEECCCCCCccccHHHHHHHhcCCCEEEEeCceecCCCCcccHhHHHHHHHHHHH-
Confidence                                     00               1123578999999999999765433333333222110 


Q ss_pred             eeecCCCcceeceeHHHHHHHHHHHHhccccCCCCCCCCCCCCCccEEecCCCCCCHHHHHHHHHHh
Q 017760          106 FKIGEPSVKTDWIYVDNLVLALILASMGLLDDIPGQKGRPIASGQPYFVSDGFPINTFEFIGPLLKT  172 (366)
Q Consensus       106 ~~~g~~~~~~~~v~vdDla~a~~~a~~~l~~~~~~~~~~~~~~g~~y~I~~~~~vs~~e~~~~l~~~  172 (366)
                          . +....++||+|++++++.+++           . . .+++|||++++.+|+.|+++.+...
T Consensus       154 ----~-~~pI~vIyVdDvv~alv~al~-----------~-~-~~GiyNIG~~~~~Si~el~~~i~~~  202 (699)
T PRK12320        154 ----S-ARPIRVLHLDDLVRFLVLALN-----------T-D-RNGVVDLATPDTTNVVTAWRLLRSV  202 (699)
T ss_pred             ----c-CCceEEEEHHHHHHHHHHHHh-----------C-C-CCCEEEEeCCCeeEHHHHHHHHHHh
Confidence                0 122345899999999999986           2 1 2349999999999999988888665

>TIGR01746 Thioester-redct thioester reductase domain

Probab=99.62  E-value=5e-15  Score=142.40  Aligned_cols=104  Identities=23%  Similarity=0.195  Sum_probs=73.9

Q ss_pred             CceEEEEeCCccccCCCCC------CHHHHHHHHHcCCCCeeecCCC-cceeceeHHHHHHHHHHHHhccccCCCCCCCC
Q 017760           72 CLYTCAVRPAAIYGPGEER------HLPRIVSLAKLGLVPFKIGEPS-VKTDWIYVDNLVLALILASMGLLDDIPGQKGR  144 (366)
Q Consensus        72 ~l~~~ilRp~~iyGp~~~~------~l~~~i~~~~~g~~~~~~g~~~-~~~~~v~vdDla~a~~~a~~~l~~~~~~~~~~  144 (366)
                      +++++++||+.+||+...+      .+.+++........   .++.. ...+++|+||++++++.++.           .
T Consensus       183 g~~~~i~Rpg~v~G~~~~g~~~~~~~~~~~~~~~~~~~~---~p~~~~~~~~~~~vddva~ai~~~~~-----------~  248 (367)
T TIGR01746       183 GLPVTIVRPGRILGNSYTGAINSSDILWRMVKGCLALGA---YPDSPELTEDLTPVDYVARAIVALSS-----------Q  248 (367)
T ss_pred             CCCEEEECCCceeecCCCCCCCchhHHHHHHHHHHHhCC---CCCCCccccCcccHHHHHHHHHHHHh-----------C
Confidence            7889999999999984322      23344443322221   22222 36789999999999999886           2


Q ss_pred             CC--CCCccEEecCCCCCCHHHHHHHHHHhcCCCCCccccCHHHHHHH
Q 017760          145 PI--ASGQPYFVSDGFPINTFEFIGPLLKTLDYDLPKSWLAVPHALFL  190 (366)
Q Consensus       145 ~~--~~g~~y~I~~~~~vs~~e~~~~l~~~lg~~~~~~~lp~~~~~~~  190 (366)
                      +.  ..+++||+++++++++.|+++.+.+ +|++.+....+.|...+.
T Consensus       249 ~~~~~~~~~~~v~~~~~~s~~e~~~~i~~-~g~~~~~~~~~~w~~~~~  295 (367)
T TIGR01746       249 PAASAGGPVFHVVNPEPVSLDEFLEWLER-AGYNLKLVSFDEWLQRLE  295 (367)
T ss_pred             CCcccCCceEEecCCCCCCHHHHHHHHHH-cCCCCCcCCHHHHHHHHH
Confidence            22  2378999999999999999999999 898877656666655443

It has been suggested that a NADP-binding motif can be found in the N-terminal portion of this domain that may form a Rossman-type fold.

>PLN02583 cinnamoyl-CoA reductase

Probab=99.62  E-value=8.1e-15  Score=137.96  Aligned_cols=83  Identities=16%  Similarity=0.041  Sum_probs=58.6

Q ss_pred             CceEEEEeCCccccCCCCCCHHHHHHHHHcCCCCeeecCCCcceeceeHHHHHHHHHHHHhccccCCCCCCCCCCCCCcc
Q 017760           72 CLYTCAVRPAAIYGPGEERHLPRIVSLAKLGLVPFKIGEPSVKTDWIYVDNLVLALILASMGLLDDIPGQKGRPIASGQP  151 (366)
Q Consensus        72 ~l~~~ilRp~~iyGp~~~~~l~~~i~~~~~g~~~~~~g~~~~~~~~v~vdDla~a~~~a~~~l~~~~~~~~~~~~~~g~~  151 (366)
                      +++++++||+.||||+.....+     ...+.. ...++  ...+||||+|+|+|+++|++           .+...+ .
T Consensus       182 gi~~v~lrp~~v~Gp~~~~~~~-----~~~~~~-~~~~~--~~~~~v~V~Dva~a~~~al~-----------~~~~~~-r  241 (297)
T PLN02583        182 GVNMVSINAGLLMGPSLTQHNP-----YLKGAA-QMYEN--GVLVTVDVNFLVDAHIRAFE-----------DVSSYG-R  241 (297)
T ss_pred             CCcEEEEcCCcccCCCCCCchh-----hhcCCc-ccCcc--cCcceEEHHHHHHHHHHHhc-----------CcccCC-c
Confidence            6789999999999998753222     222322 22222  34689999999999999997           334444 7


Q ss_pred             EEecCCCCCCHHHHHHHHHHhcC
Q 017760          152 YFVSDGFPINTFEFIGPLLKTLD  174 (366)
Q Consensus       152 y~I~~~~~vs~~e~~~~l~~~lg  174 (366)
                      |+++++......++.+.+.+.++
T Consensus       242 ~~~~~~~~~~~~~~~~~~~~~~p  264 (297)
T PLN02583        242 YLCFNHIVNTEEDAVKLAQMLSP  264 (297)
T ss_pred             EEEecCCCccHHHHHHHHHHhCC
Confidence            88887765556778888888775

>PLN02996 fatty acyl-CoA reductase

Probab=99.61  E-value=6e-15  Score=147.79  Aligned_cols=98  Identities=18%  Similarity=0.162  Sum_probs=77.2

Q ss_pred             CceEEEEeCCccccCCCCCC---------HHHHHHHHHcCCCCeeecCCCcceeceeHHHHHHHHHHHHhccccCCCCCC
Q 017760           72 CLYTCAVRPAAIYGPGEERH---------LPRIVSLAKLGLVPFKIGEPSVKTDWIYVDNLVLALILASMGLLDDIPGQK  142 (366)
Q Consensus        72 ~l~~~ilRp~~iyGp~~~~~---------l~~~i~~~~~g~~~~~~g~~~~~~~~v~vdDla~a~~~a~~~l~~~~~~~~  142 (366)
                      +++++++||++||||+..+.         ...++..+.+|....++|++++.+|++||||+|+|++.++.+-.       
T Consensus       253 ~lpv~i~RP~~V~G~~~~p~~gwi~~~~~~~~i~~~~~~g~~~~~~gdg~~~~D~v~Vddvv~a~l~a~~~~~-------  325 (491)
T PLN02996        253 NLPLVIIRPTMITSTYKEPFPGWIEGLRTIDSVIVGYGKGKLTCFLADPNSVLDVIPADMVVNAMIVAMAAHA-------  325 (491)
T ss_pred             CCCEEEECCCEeccCCcCCCCCcccchhhHHHHHHHhccceEeEEecCCCeecceecccHHHHHHHHHHHHhh-------
Confidence            57799999999999986432         23445555677777788999999999999999999999986300       


Q ss_pred             CCCCCCCccEEecCC--CCCCHHHHHHHHHHhcCCCC
Q 017760          143 GRPIASGQPYFVSDG--FPINTFEFIGPLLKTLDYDL  177 (366)
Q Consensus       143 ~~~~~~g~~y~I~~~--~~vs~~e~~~~l~~~lg~~~  177 (366)
                       .....+++||++++  +++|+.|+++.+.+..+..+
T Consensus       326 -~~~~~~~vYNi~s~~~~~~s~~ei~~~~~~~~~~~p  361 (491)
T PLN02996        326 -GGQGSEIIYHVGSSLKNPVKFSNLHDFAYRYFSKNP  361 (491)
T ss_pred             -ccCCCCcEEEecCCCCCcccHHHHHHHHHHHhhhCC
Confidence             01124679999988  89999999999999887543

>KOG2865 consensus NADH:ubiquinone oxidoreductase, NDUFA9/39kDa subunit [Energy production and conversion]

Probab=99.58  E-value=2.1e-14  Score=128.71  Aligned_cols=222  Identities=17%  Similarity=0.099  Sum_probs=152.5

Q ss_pred             CeEEEEcCCChhHHHHHHHHHHcCCceEEEEecCCCCcccc-cccC--CCeEEEEcc-----------------------
Q 017760           12 KTFLVTGGLGHVGSALCLELVRRGAYQVRAFDLRTNSPWSH-LLIN--HGVHCIQGL-----------------------   65 (366)
Q Consensus        12 ~~VlITGgtGfiG~~L~~~L~~~g~~~V~~~dr~~~~~~~~-~~~~--~~v~~i~gD-----------------------   65 (366)
                      ..+-|.|||||+|+.++.+|.+.| .||++-.|..+....+ .+..  .++-++.-|                       
T Consensus        62 iVaTVFGAtGFlGryvvnklak~G-SQviiPyR~d~~~~r~lkvmGdLGQvl~~~fd~~DedSIr~vvk~sNVVINLIGr  140 (391)
T KOG2865|consen   62 IVATVFGATGFLGRYVVNKLAKMG-SQVIIPYRGDEYDPRHLKVMGDLGQVLFMKFDLRDEDSIRAVVKHSNVVINLIGR  140 (391)
T ss_pred             eEEEEecccccccHHHHHHHhhcC-CeEEEeccCCccchhheeecccccceeeeccCCCCHHHHHHHHHhCcEEEEeecc
Confidence            346789999999999999999999 5999987765443211 0000  233333333                       


Q ss_pred             -------------------------------------------------cc-------CCCCCceEEEEeCCccccCCCC
Q 017760           66 -------------------------------------------------RK-------NNRKCLYTCAVRPAAIYGPGEE   89 (366)
Q Consensus        66 -------------------------------------------------ks-------~~~~~l~~~ilRp~~iyGp~~~   89 (366)
                                                                       ++       ..+.-..++|+||+.|||..|+
T Consensus       141 d~eTknf~f~Dvn~~~aerlAricke~GVerfIhvS~Lganv~s~Sr~LrsK~~gE~aVrdafPeAtIirPa~iyG~eDr  220 (391)
T KOG2865|consen  141 DYETKNFSFEDVNVHIAERLARICKEAGVERFIHVSCLGANVKSPSRMLRSKAAGEEAVRDAFPEATIIRPADIYGTEDR  220 (391)
T ss_pred             ccccCCcccccccchHHHHHHHHHHhhChhheeehhhccccccChHHHHHhhhhhHHHHHhhCCcceeechhhhcccchh
Confidence                                                             11       1122345999999999999654


Q ss_pred             CCHHHHHHHHHcCCCCeeecCC-CcceeceeHHHHHHHHHHHHhccccCCCCCCCCCCCCCccEEecCCCCCCHHHHHHH
Q 017760           90 RHLPRIVSLAKLGLVPFKIGEP-SVKTDWIYVDNLVLALILASMGLLDDIPGQKGRPIASGQPYFVSDGFPINTFEFIGP  168 (366)
Q Consensus        90 ~~l~~~i~~~~~g~~~~~~g~~-~~~~~~v~vdDla~a~~~a~~~l~~~~~~~~~~~~~~g~~y~I~~~~~vs~~e~~~~  168 (366)
                       ++.......++=.++...+.| +...++|||-|++.+++.|.+           ++...|++|...++......|+++.
T Consensus       221 -fln~ya~~~rk~~~~pL~~~GekT~K~PVyV~DVaa~IvnAvk-----------Dp~s~Gktye~vGP~~yql~eLvd~  288 (391)
T KOG2865|consen  221 -FLNYYASFWRKFGFLPLIGKGEKTVKQPVYVVDVAAAIVNAVK-----------DPDSMGKTYEFVGPDRYQLSELVDI  288 (391)
T ss_pred             -HHHHHHHHHHhcCceeeecCCcceeeccEEEehHHHHHHHhcc-----------CccccCceeeecCCchhhHHHHHHH
Confidence             677777666654445556555 467799999999999999997           7788999999999999999999999


Q ss_pred             HHHhcCCCCCccccCHHHHHHHHHHHHHHHHhhhhccccccCCCCCCcHHhhhhhcccc-eecHHHHHHhcCCCCCCChH
Q 017760          169 LLKTLDYDLPKSWLAVPHALFLGKVFSFFYSVLYPWLNRWWLPQPLILPAEVYKVGVTH-YFSLLKAKDELCYVPIVSPR  247 (366)
Q Consensus       169 l~~~lg~~~~~~~lp~~~~~~~a~~~e~~~~~~~~~~~~~~~~~p~l~~~ev~~~~~~~-~~d~~ka~~~LG~~p~~~~~  247 (366)
                      +-+....-......|.+..+.++...+.....+.        +..+++++.+....++. ..+.....++||..+. .++
T Consensus       289 my~~~~~~~ry~r~~mP~f~a~a~~~~f~~~pf~--------~~~pln~d~ie~~~v~~~vlt~~~tleDLgv~~t-~le  359 (391)
T KOG2865|consen  289 MYDMAREWPRYVRLPMPIFKAMAAARDFMIVPFP--------PPSPLNRDQIERLTVTDLVLTGAPTLEDLGVVLT-KLE  359 (391)
T ss_pred             HHHHHhhccccccCCcHHHHHHHhhhheeecCCC--------CCCCCCHHHhhheeehhhhcCCCCcHhhcCceee-ecc
Confidence            9888766444445555555555544444211111        23348888888887766 5667777788998864 555


Q ss_pred             HHHHHHHH
Q 017760          248 EGMAATIS  255 (366)
Q Consensus       248 e~l~~~v~  255 (366)
                      -.--+.+.
T Consensus       360 ~~~~e~l~  367 (391)
T KOG2865|consen  360 LYPVEFLR  367 (391)
T ss_pred             cccHHHHH
Confidence            43333333

>KOG1372 consensus GDP-mannose 4,6 dehydratase [Carbohydrate transport and metabolism]

Probab=99.52  E-value=3.5e-13  Score=118.56  Aligned_cols=135  Identities=20%  Similarity=0.133  Sum_probs=92.8

Q ss_pred             HHHHHHHHHcCC-CCeeecCCCcceeceeHHHHHHHHHHHHhccccCCCCCCCCCCCCCccEEecCCCCCCHHHHHHHHH
Q 017760           92 LPRIVSLAKLGL-VPFKIGEPSVKTDWIYVDNLVLALILASMGLLDDIPGQKGRPIASGQPYFVSDGFPINTFEFIGPLL  170 (366)
Q Consensus        92 l~~~i~~~~~g~-~~~~~g~~~~~~~~v~vdDla~a~~~a~~~l~~~~~~~~~~~~~~g~~y~I~~~~~vs~~e~~~~l~  170 (366)
                      +.+-+..+.-|+ ..+..|+-++.+||-|+.|.++|+.+.+++             ....-|.|+.|+..|++||.+.-.
T Consensus       228 ItRsvakI~~gqqe~~~LGNL~a~RDWGhA~dYVEAMW~mLQ~-------------d~PdDfViATge~hsVrEF~~~aF  294 (376)
T KOG1372|consen  228 ITRSVAKISLGQQEKIELGNLSALRDWGHAGDYVEAMWLMLQQ-------------DSPDDFVIATGEQHSVREFCNLAF  294 (376)
T ss_pred             HHHHHHHhhhcceeeEEecchhhhcccchhHHHHHHHHHHHhc-------------CCCCceEEecCCcccHHHHHHHHH
Confidence            344445555553 345678889999999999999999999972             234569999999999999999888


Q ss_pred             HhcCCCCCcc--ccCHHHHHHHHHHHHHHHHhhhhccccccCCCCCCcHHhhhhhcccceecHHHHHHhcCCCCCCChHH
Q 017760          171 KTLDYDLPKS--WLAVPHALFLGKVFSFFYSVLYPWLNRWWLPQPLILPAEVYKVGVTHYFSLLKAKDELCYVPIVSPRE  248 (366)
Q Consensus       171 ~~lg~~~~~~--~lp~~~~~~~a~~~e~~~~~~~~~~~~~~~~~p~l~~~ev~~~~~~~~~d~~ka~~~LG~~p~~~~~e  248 (366)
                      ...|......  .+.  .         ....-.+-.  +-...+..++|.|+..+    .-|.+|+++.|||+|++.++|
T Consensus       295 ~~ig~~l~Weg~gv~--~---------~~~n~~g~v--~V~v~~kYyRPtEVd~L----qGdasKAk~~LgW~pkv~f~e  357 (376)
T KOG1372|consen  295 AEIGEVLNWEGEGVD--E---------VGKNDDGVV--RVKVDPKYYRPTEVDTL----QGDASKAKKTLGWKPKVTFPE  357 (376)
T ss_pred             HhhCcEEeecccccc--c---------ccccCCceE--EEEecccccCcchhhhh----cCChHHHHHhhCCCCccCHHH
Confidence            7777331100  000  0         000000000  00124566788888765    569999999999999999999


Q ss_pred             HHHHHHHH
Q 017760          249 GMAATISY  256 (366)
Q Consensus       249 ~l~~~v~~  256 (366)
                      -+++++..
T Consensus       358 LVkeMv~~  365 (376)
T KOG1372|consen  358 LVKEMVAS  365 (376)
T ss_pred             HHHHHHHh
Confidence            99998864

>PLN02778 3,5-epimerase/4-reductase

Probab=99.50  E-value=1.3e-12  Score=123.00  Aligned_cols=133  Identities=12%  Similarity=0.013  Sum_probs=84.3

Q ss_pred             EEEEeCCccccCCCCCCHHHHHHHHHcCCCCeeecCCCcceeceeHHHHHHHHHHHHhccccCCCCCCCCCCCCCccEEe
Q 017760           75 TCAVRPAAIYGPGEERHLPRIVSLAKLGLVPFKIGEPSVKTDWIYVDNLVLALILASMGLLDDIPGQKGRPIASGQPYFV  154 (366)
Q Consensus        75 ~~ilRp~~iyGp~~~~~l~~~i~~~~~g~~~~~~g~~~~~~~~v~vdDla~a~~~a~~~l~~~~~~~~~~~~~~g~~y~I  154 (366)
                      ..++|+...+|++.. ....++..+..+..+...+     .+++|++|+++|++.+++           . .. +++||+
T Consensus       158 ~~~lr~~~~~~~~~~-~~~~fi~~~~~~~~~~~~~-----~s~~yv~D~v~al~~~l~-----------~-~~-~g~yNi  218 (298)
T PLN02778        158 VCTLRVRMPISSDLS-NPRNFITKITRYEKVVNIP-----NSMTILDELLPISIEMAK-----------R-NL-TGIYNF  218 (298)
T ss_pred             cEEeeecccCCcccc-cHHHHHHHHHcCCCeeEcC-----CCCEEHHHHHHHHHHHHh-----------C-CC-CCeEEe
Confidence            345666555555322 2344666666665433332     379999999999999985           2 22 359999


Q ss_pred             cCCCCCCHHHHHHHHHHhcCCCCC--ccccCHHHHHHHHHHHHHHHHhhhhccccccCCCCCCcHHhhhhhcc-cceecH
Q 017760          155 SDGFPINTFEFIGPLLKTLDYDLP--KSWLAVPHALFLGKVFSFFYSVLYPWLNRWWLPQPLILPAEVYKVGV-THYFSL  231 (366)
Q Consensus       155 ~~~~~vs~~e~~~~l~~~lg~~~~--~~~lp~~~~~~~a~~~e~~~~~~~~~~~~~~~~~p~l~~~ev~~~~~-~~~~d~  231 (366)
                      ++++++|..|+++.+++.+|.+.+  .+.++ ..                               ....+... +..+|+
T Consensus       219 gs~~~iS~~el~~~i~~~~~~~~~~~~~~i~-~~-------------------------------~~~~~~~~~~~~Ld~  266 (298)
T PLN02778        219 TNPGVVSHNEILEMYRDYIDPSFTWKNFTLE-EQ-------------------------------AKVIVAPRSNNELDT  266 (298)
T ss_pred             CCCCcccHHHHHHHHHHHhCCCceeccccHH-HH-------------------------------HHHHhCCCccccccH
Confidence            999999999999999999996432  11111 00                               00001111 115899


Q ss_pred             HHHHHhcCCCCCCChHHHHHHHHHHHHh
Q 017760          232 LKAKDELCYVPIVSPREGMAATISYWQD  259 (366)
Q Consensus       232 ~ka~~~LG~~p~~~~~e~l~~~v~~~~~  259 (366)
                      +|+++.++-.+. ..+++++...+-.|.
T Consensus       267 ~k~~~~~~~~~~-~~~~~~~~~~~~~~~  293 (298)
T PLN02778        267 TKLKREFPELLP-IKESLIKYVFEPNKK  293 (298)
T ss_pred             HHHHHhcccccc-hHHHHHHHHHHHHHh
Confidence            999998875443 557777777766644

>PLN02503 fatty acyl-CoA reductase 2

Probab=99.40  E-value=2e-12  Score=131.28  Aligned_cols=96  Identities=16%  Similarity=0.136  Sum_probs=74.1

Q ss_pred             CceEEEEeCCcc----------ccCCCCCCHHHHHHHHHcCCCCeeecCCCcceeceeHHHHHHHHHHHHhccccCCCCC
Q 017760           72 CLYTCAVRPAAI----------YGPGEERHLPRIVSLAKLGLVPFKIGEPSVKTDWIYVDNLVLALILASMGLLDDIPGQ  141 (366)
Q Consensus        72 ~l~~~ilRp~~i----------yGp~~~~~l~~~i~~~~~g~~~~~~g~~~~~~~~v~vdDla~a~~~a~~~l~~~~~~~  141 (366)
                      +++++|+||+.|          |++++....+.++.. .+|....++++++...|.|+||++|++++.|+.....     
T Consensus       367 ~LPv~IvRPsiV~st~~eP~pGw~d~~~~~~p~~~~~-g~G~lr~~~~~~~~~~DiVPVD~vvna~i~a~a~~~~-----  440 (605)
T PLN02503        367 DIPVVIIRPSVIESTWKDPFPGWMEGNRMMDPIVLYY-GKGQLTGFLADPNGVLDVVPADMVVNATLAAMAKHGG-----  440 (605)
T ss_pred             CCCEEEEcCCEecccccCCccccccCccccchhhhhe-eccceeEEEeCCCeeEeEEeecHHHHHHHHHHHhhhc-----
Confidence            688999999999          667655445555443 4777767889999999999999999999999532111     


Q ss_pred             CCCCCCCCccEEecCC--CCCCHHHHHHHHHHhcCC
Q 017760          142 KGRPIASGQPYFVSDG--FPINTFEFIGPLLKTLDY  175 (366)
Q Consensus       142 ~~~~~~~g~~y~I~~~--~~vs~~e~~~~l~~~lg~  175 (366)
                        .....+++||++++  +|+++.|+.+.+.+....
T Consensus       441 --~~~~~~~vYn~ts~~~nP~t~~~~~~~~~~~~~~  474 (605)
T PLN02503        441 --AAKPEINVYQIASSVVNPLVFQDLARLLYEHYKS  474 (605)
T ss_pred             --ccCCCCCEEEeCCCCCCCeEHHHHHHHHHHHHhh
Confidence              11235789999988  899999999999886654

>COG1086 Predicted nucleoside-diphosphate sugar epimerases [Cell envelope biogenesis, outer membrane / Carbohydrate transport and metabolism]

Probab=99.36  E-value=1.4e-11  Score=120.82  Aligned_cols=155  Identities=19%  Similarity=0.290  Sum_probs=127.1

Q ss_pred             cccCCeEEEEcCCChhHHHHHHHHHHcCCceEEEEecCCCCccc--ccc----cCCCeEEEEcc----------------
Q 017760            8 GIEGKTFLVTGGLGHVGSALCLELVRRGAYQVRAFDLRTNSPWS--HLL----INHGVHCIQGL----------------   65 (366)
Q Consensus         8 ~~~~~~VlITGgtGfiG~~L~~~L~~~g~~~V~~~dr~~~~~~~--~~~----~~~~v~~i~gD----------------   65 (366)
                      +..+++|+||||+|-+|+.+|+++++.+..+++.+++++.+-..  ..+    ...++.++.||                
T Consensus       247 ~~~gK~vLVTGagGSiGsel~~qil~~~p~~i~l~~~~E~~~~~i~~el~~~~~~~~~~~~igdVrD~~~~~~~~~~~kv  326 (588)
T COG1086         247 MLTGKTVLVTGGGGSIGSELCRQILKFNPKEIILFSRDEYKLYLIDMELREKFPELKLRFYIGDVRDRDRVERAMEGHKV  326 (588)
T ss_pred             HcCCCEEEEeCCCCcHHHHHHHHHHhcCCCEEEEecCchHHHHHHHHHHHhhCCCcceEEEecccccHHHHHHHHhcCCC
Confidence            45689999999999999999999999988899999998754321  111    13677888888                


Q ss_pred             -------------------------------------------------------------------------ccCCCC-
Q 017760           66 -------------------------------------------------------------------------RKNNRK-   71 (366)
Q Consensus        66 -------------------------------------------------------------------------ks~~~~-   71 (366)
                                                                                               .+.+.. 
T Consensus       327 d~VfHAAA~KHVPl~E~nP~Eai~tNV~GT~nv~~aa~~~~V~~~V~iSTDKAV~PtNvmGaTKr~aE~~~~a~~~~~~~  406 (588)
T COG1086         327 DIVFHAAALKHVPLVEYNPEEAIKTNVLGTENVAEAAIKNGVKKFVLISTDKAVNPTNVMGATKRLAEKLFQAANRNVSG  406 (588)
T ss_pred             ceEEEhhhhccCcchhcCHHHHHHHhhHhHHHHHHHHHHhCCCEEEEEecCcccCCchHhhHHHHHHHHHHHHHhhccCC
Confidence                                                                                     011122 


Q ss_pred             -CceEEEEeCCccccCCCCCCHHHHHHHHHcCCCCeeecCCCcceeceeHHHHHHHHHHHHhccccCCCCCCCCCCCCCc
Q 017760           72 -CLYTCAVRPAAIYGPGEERHLPRIVSLAKLGLVPFKIGEPSVKTDWIYVDNLVLALILASMGLLDDIPGQKGRPIASGQ  150 (366)
Q Consensus        72 -~l~~~ilRp~~iyGp~~~~~l~~~i~~~~~g~~~~~~g~~~~~~~~v~vdDla~a~~~a~~~l~~~~~~~~~~~~~~g~  150 (366)
                       +...|++|.|||.|.+. +.+|-+.+++++|.++ .+.+++..+=|..++|.|+.++.|..            ....|+
T Consensus       407 ~~T~f~~VRFGNVlGSrG-SViPlFk~QI~~Ggpl-TvTdp~mtRyfMTI~EAv~LVlqA~a------------~~~gGe  472 (588)
T COG1086         407 TGTRFCVVRFGNVLGSRG-SVIPLFKKQIAEGGPL-TVTDPDMTRFFMTIPEAVQLVLQAGA------------IAKGGE  472 (588)
T ss_pred             CCcEEEEEEecceecCCC-CCHHHHHHHHHcCCCc-cccCCCceeEEEEHHHHHHHHHHHHh------------hcCCCc
Confidence             58899999999999864 4899999999999875 46788999999999999999999984            356788


Q ss_pred             cEEecCCCCCCHHHHHHHHHHhcCCC
Q 017760          151 PYFVSDGFPINTFEFIGPLLKTLDYD  176 (366)
Q Consensus       151 ~y~I~~~~~vs~~e~~~~l~~~lg~~  176 (366)
                      +|-.--|+|++..|+++.+.+..|+.
T Consensus       473 ifvldMGepvkI~dLAk~mi~l~g~~  498 (588)
T COG1086         473 IFVLDMGEPVKIIDLAKAMIELAGQT  498 (588)
T ss_pred             EEEEcCCCCeEHHHHHHHHHHHhCCC
Confidence            88888889999999999999999844

>PF02719 Polysacc_synt_2: Polysaccharide biosynthesis protein; InterPro: IPR003869 This domain is found in diverse bacterial polysaccharide biosynthesis proteins including the CapD protein from Staphylococcus aureus [], the WalL protein, mannosyl-transferase [], and several putative epimerases

Probab=99.29  E-value=8.7e-12  Score=114.95  Aligned_cols=149  Identities=19%  Similarity=0.288  Sum_probs=107.7

Q ss_pred             EEEEcCCChhHHHHHHHHHHcCCceEEEEecCCCCccc--ccc----cCCCeE----EEEcc------------------
Q 017760           14 FLVTGGLGHVGSALCLELVRRGAYQVRAFDLRTNSPWS--HLL----INHGVH----CIQGL------------------   65 (366)
Q Consensus        14 VlITGgtGfiG~~L~~~L~~~g~~~V~~~dr~~~~~~~--~~~----~~~~v~----~i~gD------------------   65 (366)
                      ||||||+|.+|+.||++|++.+..+++++|+++..-..  ..+    ..++++    .+.||                  
T Consensus         1 VLVTGa~GSIGseL~rql~~~~p~~lil~d~~E~~l~~l~~~l~~~~~~~~v~~~~~~vigDvrd~~~l~~~~~~~~pdi   80 (293)
T PF02719_consen    1 VLVTGAGGSIGSELVRQLLRYGPKKLILFDRDENKLYELERELRSRFPDPKVRFEIVPVIGDVRDKERLNRIFEEYKPDI   80 (293)
T ss_dssp             EEEETTTSHHHHHHHHHHHCCB-SEEEEEES-HHHHHHHHHHCHHHC--TTCEEEEE--CTSCCHHHHHHHHTT--T-SE
T ss_pred             CEEEccccHHHHHHHHHHHhcCCCeEEEeCCChhHHHHHHHHHhhcccccCcccccCceeecccCHHHHHHHHhhcCCCE
Confidence            79999999999999999999987789999998643211  111    123343    34777                  


Q ss_pred             -------------------------------------------------------------------------ccCCCCC
Q 017760           66 -------------------------------------------------------------------------RKNNRKC   72 (366)
Q Consensus        66 -------------------------------------------------------------------------ks~~~~~   72 (366)
                                                                                               ......+
T Consensus        81 VfHaAA~KhVpl~E~~p~eav~tNv~GT~nv~~aa~~~~v~~~v~ISTDKAv~PtnvmGatKrlaE~l~~~~~~~~~~~~  160 (293)
T PF02719_consen   81 VFHAAALKHVPLMEDNPFEAVKTNVLGTQNVAEAAIEHGVERFVFISTDKAVNPTNVMGATKRLAEKLVQAANQYSGNSD  160 (293)
T ss_dssp             EEE------HHHHCCCHHHHHHHHCHHHHHHHHHHHHTT-SEEEEEEECGCSS--SHHHHHHHHHHHHHHHHCCTSSSS-
T ss_pred             EEEChhcCCCChHHhCHHHHHHHHHHHHHHHHHHHHHcCCCEEEEccccccCCCCcHHHHHHHHHHHHHHHHhhhCCCCC
Confidence                                                                                     1122346


Q ss_pred             ceEEEEeCCccccCCCCCCHHHHHHHHHcCCCCeeecCCCcceeceeHHHHHHHHHHHHhccccCCCCCCCCCCCCCccE
Q 017760           73 LYTCAVRPAAIYGPGEERHLPRIVSLAKLGLVPFKIGEPSVKTDWIYVDNLVLALILASMGLLDDIPGQKGRPIASGQPY  152 (366)
Q Consensus        73 l~~~ilRp~~iyGp~~~~~l~~~i~~~~~g~~~~~~g~~~~~~~~v~vdDla~a~~~a~~~l~~~~~~~~~~~~~~g~~y  152 (366)
                      ...+++|.|+|.|... +.+|.+.+++++|.++. +.+++..+=|+.+++.++.++.|...            ...|++|
T Consensus       161 t~f~~VRFGNVlgS~G-SVip~F~~Qi~~g~PlT-vT~p~mtRffmti~EAv~Lvl~a~~~------------~~~geif  226 (293)
T PF02719_consen  161 TKFSSVRFGNVLGSRG-SVIPLFKKQIKNGGPLT-VTDPDMTRFFMTIEEAVQLVLQAAAL------------AKGGEIF  226 (293)
T ss_dssp             -EEEEEEE-EETTGTT-SCHHHHHHHHHTTSSEE-ECETT-EEEEE-HHHHHHHHHHHHHH--------------TTEEE
T ss_pred             cEEEEEEecceecCCC-cHHHHHHHHHHcCCcce-eCCCCcEEEEecHHHHHHHHHHHHhh------------CCCCcEE
Confidence            8999999999999854 48999999999998754 66778999999999999999999853            4568888


Q ss_pred             EecCCCCCCHHHHHHHHHHhcCCC
Q 017760          153 FVSDGFPINTFEFIGPLLKTLDYD  176 (366)
Q Consensus       153 ~I~~~~~vs~~e~~~~l~~~lg~~  176 (366)
                      ..--|++++..|+++.+.+..|++
T Consensus       227 vl~mg~~v~I~dlA~~~i~~~g~~  250 (293)
T PF02719_consen  227 VLDMGEPVKILDLAEAMIELSGLE  250 (293)
T ss_dssp             EE---TCEECCCHHHHHHHHTT-E
T ss_pred             EecCCCCcCHHHHHHHHHhhcccc
Confidence            888889999999999999999864

The CapD protein is required for biosynthesis of type 1 capsular polysaccharide.; GO: 0009058 biosynthetic process; PDB: 3PVZ_C 2GN8_B 2GN4_A 2GNA_B 2GN6_A 2GN9_A.

>COG0702 Predicted nucleoside-diphosphate-sugar epimerases [Cell envelope biogenesis, outer membrane / Carbohydrate transport and metabolism]

Probab=99.26  E-value=7e-11  Score=109.13  Aligned_cols=152  Identities=26%  Similarity=0.225  Sum_probs=113.3

Q ss_pred             CeEEEEcCCChhHHHHHHHHHHcCCceEEEEecCCCCcccccccCCCeEEEEcc--------------------------
Q 017760           12 KTFLVTGGLGHVGSALCLELVRRGAYQVRAFDLRTNSPWSHLLINHGVHCIQGL--------------------------   65 (366)
Q Consensus        12 ~~VlITGgtGfiG~~L~~~L~~~g~~~V~~~dr~~~~~~~~~~~~~~v~~i~gD--------------------------   65 (366)
                      ++|+||||||++|++++++|+++| ++|++..|++.......   .+++...+|                          
T Consensus         1 ~~ilV~GatG~~G~~~~~~L~~~~-~~v~~~~r~~~~~~~~~---~~v~~~~~d~~~~~~l~~a~~G~~~~~~i~~~~~~   76 (275)
T COG0702           1 MKILVTGATGFVGGAVVRELLARG-HEVRAAVRNPEAAAALA---GGVEVVLGDLRDPKSLVAGAKGVDGVLLISGLLDG   76 (275)
T ss_pred             CeEEEEecccchHHHHHHHHHhCC-CEEEEEEeCHHHHHhhc---CCcEEEEeccCCHhHHHHHhccccEEEEEeccccc
Confidence            479999999999999999999999 59999999865443222   455555555                          


Q ss_pred             --------------------------------------------------ccCCCCCceEEEEeCCccccCCCCCCHHHH
Q 017760           66 --------------------------------------------------RKNNRKCLYTCAVRPAAIYGPGEERHLPRI   95 (366)
Q Consensus        66 --------------------------------------------------ks~~~~~l~~~ilRp~~iyGp~~~~~l~~~   95 (366)
                                                                        +.....+++++++|++.+|.......   .
T Consensus        77 ~~~~~~~~~~~~~~~a~~a~~~~~~~~~~s~~~~~~~~~~~~~~~~~~~e~~l~~sg~~~t~lr~~~~~~~~~~~~---~  153 (275)
T COG0702          77 SDAFRAVQVTAVVRAAEAAGAGVKHGVSLSVLGADAASPSALARAKAAVEAALRSSGIPYTTLRRAAFYLGAGAAF---I  153 (275)
T ss_pred             ccchhHHHHHHHHHHHHHhcCCceEEEEeccCCCCCCCccHHHHHHHHHHHHHHhcCCCeEEEecCeeeeccchhH---H
Confidence                                                              01344578889999877777654422   2


Q ss_pred             HHHHHcCCCCeeecCCCcceeceeHHHHHHHHHHHHhccccCCCCCCCCCCCCCccEEecCCCCCCHHHHHHHHHHhcCC
Q 017760           96 VSLAKLGLVPFKIGEPSVKTDWIYVDNLVLALILASMGLLDDIPGQKGRPIASGQPYFVSDGFPINTFEFIGPLLKTLDY  175 (366)
Q Consensus        96 i~~~~~g~~~~~~g~~~~~~~~v~vdDla~a~~~a~~~l~~~~~~~~~~~~~~g~~y~I~~~~~vs~~e~~~~l~~~lg~  175 (366)
                      ......+.+....+.+  ..+++.++|++.+...++.           .+...++.|.+++++..+..|..+.+.+..|.
T Consensus       154 ~~~~~~~~~~~~~~~~--~~~~i~~~d~a~~~~~~l~-----------~~~~~~~~~~l~g~~~~~~~~~~~~l~~~~gr  220 (275)
T COG0702         154 EAAEAAGLPVIPRGIG--RLSPIAVDDVAEALAAALD-----------APATAGRTYELAGPEALTLAELASGLDYTIGR  220 (275)
T ss_pred             HHHHhhCCceecCCCC--ceeeeEHHHHHHHHHHHhc-----------CCcccCcEEEccCCceecHHHHHHHHHHHhCC
Confidence            2333344443333443  7899999999999999986           45578899999999999999999999999998


Q ss_pred             CCCccccC
Q 017760          176 DLPKSWLA  183 (366)
Q Consensus       176 ~~~~~~lp  183 (366)
                      +......|
T Consensus       221 ~~~~~~~~  228 (275)
T COG0702         221 PVGLIPEA  228 (275)
T ss_pred             cceeeCCc
Confidence            86654333

>TIGR03443 alpha_am_amid L-aminoadipate-semialdehyde dehydrogenase

Probab=99.19  E-value=3.6e-10  Score=127.09  Aligned_cols=102  Identities=20%  Similarity=0.197  Sum_probs=71.0

Q ss_pred             CceEEEEeCCccccCCCCC------CHHHHHHHHHcCCCCeeecCCCcceeceeHHHHHHHHHHHHhccccCCCCCCCCC
Q 017760           72 CLYTCAVRPAAIYGPGEER------HLPRIVSLAKLGLVPFKIGEPSVKTDWIYVDNLVLALILASMGLLDDIPGQKGRP  145 (366)
Q Consensus        72 ~l~~~ilRp~~iyGp~~~~------~l~~~i~~~~~g~~~~~~g~~~~~~~~v~vdDla~a~~~a~~~l~~~~~~~~~~~  145 (366)
                      +++++++||+.|||++..+      .+..++.....   ....++....++|++|||++++++.++..          ..
T Consensus      1168 g~~~~i~Rpg~v~G~~~~g~~~~~~~~~~~~~~~~~---~~~~p~~~~~~~~~~Vddva~ai~~~~~~----------~~ 1234 (1389)
T TIGR03443      1168 GLRGCIVRPGYVTGDSKTGATNTDDFLLRMLKGCIQ---LGLIPNINNTVNMVPVDHVARVVVAAALN----------PP 1234 (1389)
T ss_pred             CCCEEEECCCccccCCCcCCCCchhHHHHHHHHHHH---hCCcCCCCCccccccHHHHHHHHHHHHhC----------Cc
Confidence            6889999999999997542      23333332221   11233445668999999999999999862          11


Q ss_pred             -CCCCccEEecCCCCCCHHHHHHHHHHhcCCCCCccccCHHHH
Q 017760          146 -IASGQPYFVSDGFPINTFEFIGPLLKTLDYDLPKSWLAVPHA  187 (366)
Q Consensus       146 -~~~g~~y~I~~~~~vs~~e~~~~l~~~lg~~~~~~~lp~~~~  187 (366)
                       ...+.+||++++..+++.++++.+.+ .|++.+....+.|..
T Consensus      1235 ~~~~~~i~~~~~~~~~~~~~~~~~l~~-~g~~~~~~~~~~w~~ 1276 (1389)
T TIGR03443      1235 KESELAVAHVTGHPRIRFNDFLGTLKT-YGYDVEIVDYVHWRK 1276 (1389)
T ss_pred             ccCCCCEEEeCCCCCCcHHHHHHHHHH-hCCCCCccCHHHHHH
Confidence             12456899999999999999999975 477666555444444

Members of this protein family are L-aminoadipate-semialdehyde dehydrogenase (EC 1.2.1.31), product of the LYS2 gene. It is also called alpha-aminoadipate reductase. In fungi, lysine is synthesized via aminoadipate. Currently, all members of this family are fungal.

>PF13460 NAD_binding_10: NADH(P)-binding ; PDB: 3OH8_A 3E8X_A 3GPI_A 3QVO_A 2Q46_B 1YBM_B 1XQ6_B 2Q4B_B 3EW7_A 3IUS_B

Probab=99.13  E-value=1.4e-10  Score=100.97  Aligned_cols=101  Identities=29%  Similarity=0.323  Sum_probs=78.9

Q ss_pred             EEEEcCCChhHHHHHHHHHHcCCceEEEEecCCCCcccccccCCCeEEEEcc----------------------------
Q 017760           14 FLVTGGLGHVGSALCLELVRRGAYQVRAFDLRTNSPWSHLLINHGVHCIQGL----------------------------   65 (366)
Q Consensus        14 VlITGgtGfiG~~L~~~L~~~g~~~V~~~dr~~~~~~~~~~~~~~v~~i~gD----------------------------   65 (366)
                      |+|+||||++|++++++|+++| ++|+++.|++.+...    ..+++.+++|                            
T Consensus         1 I~V~GatG~vG~~l~~~L~~~~-~~V~~~~R~~~~~~~----~~~~~~~~~d~~d~~~~~~al~~~d~vi~~~~~~~~~~   75 (183)
T PF13460_consen    1 ILVFGATGFVGRALAKQLLRRG-HEVTALVRSPSKAED----SPGVEIIQGDLFDPDSVKAALKGADAVIHAAGPPPKDV   75 (183)
T ss_dssp             EEEETTTSHHHHHHHHHHHHTT-SEEEEEESSGGGHHH----CTTEEEEESCTTCHHHHHHHHTTSSEEEECCHSTTTHH
T ss_pred             eEEECCCChHHHHHHHHHHHCC-CEEEEEecCchhccc----ccccccceeeehhhhhhhhhhhhcchhhhhhhhhcccc
Confidence            7999999999999999999999 699999999764322    6789999999                            


Q ss_pred             -----------------------------------------------------ccCCCCCceEEEEeCCccccCCCCCCH
Q 017760           66 -----------------------------------------------------RKNNRKCLYTCAVRPAAIYGPGEERHL   92 (366)
Q Consensus        66 -----------------------------------------------------ks~~~~~l~~~ilRp~~iyGp~~~~~l   92 (366)
                                                                           +..++.+++++++||+.+||+....  
T Consensus        76 ~~~~~~~~a~~~~~~~~~v~~s~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~e~~~~~~~~~~~ivrp~~~~~~~~~~--  153 (183)
T PF13460_consen   76 DAAKNIIEAAKKAGVKRVVYLSSAGVYRDPPGLFSDEDKPIFPEYARDKREAEEALRESGLNWTIVRPGWIYGNPSRS--  153 (183)
T ss_dssp             HHHHHHHHHHHHTTSSEEEEEEETTGTTTCTSEEEGGTCGGGHHHHHHHHHHHHHHHHSTSEEEEEEESEEEBTTSSS--
T ss_pred             cccccccccccccccccceeeeccccCCCCCcccccccccchhhhHHHHHHHHHHHHhcCCCEEEEECcEeEeCCCcc--
Confidence                                                                 0022358899999999999996431  


Q ss_pred             HHHHHHHHcCCCCeeecCCCcceeceeHHHHHHHHHHHHh
Q 017760           93 PRIVSLAKLGLVPFKIGEPSVKTDWIYVDNLVLALILASM  132 (366)
Q Consensus        93 ~~~i~~~~~g~~~~~~g~~~~~~~~v~vdDla~a~~~a~~  132 (366)
                               +.  ....++....++|+++|+|++++.+++
T Consensus       154 ---------~~--~~~~~~~~~~~~i~~~DvA~~~~~~l~  182 (183)
T PF13460_consen  154 ---------YR--LIKEGGPQGVNFISREDVAKAIVEALE  182 (183)
T ss_dssp             ---------EE--EESSTSTTSHCEEEHHHHHHHHHHHHH
T ss_pred             ---------ee--EEeccCCCCcCcCCHHHHHHHHHHHhC
Confidence                     01  111134556799999999999999886

...

>PRK09135 pteridine reductase; Provisional

Probab=99.12  E-value=6.1e-10  Score=101.29  Aligned_cols=37  Identities=30%  Similarity=0.391  Sum_probs=33.2

Q ss_pred             ccCCeEEEEcCCChhHHHHHHHHHHcCCceEEEEecCC
Q 017760            9 IEGKTFLVTGGLGHVGSALCLELVRRGAYQVRAFDLRT   46 (366)
Q Consensus         9 ~~~~~VlITGgtGfiG~~L~~~L~~~g~~~V~~~dr~~   46 (366)
                      +++++|+||||+|++|++++++|.++|+ +|++++|+.
T Consensus         4 ~~~~~vlItGa~g~iG~~l~~~l~~~g~-~v~~~~r~~   40 (249)
T PRK09135          4 DSAKVALITGGARRIGAAIARTLHAAGY-RVAIHYHRS   40 (249)
T ss_pred             CCCCEEEEeCCCchHHHHHHHHHHHCCC-EEEEEcCCC
Confidence            4457899999999999999999999995 899999864

>PF05368 NmrA: NmrA-like family; InterPro: IPR008030 NmrA is a negative transcriptional regulator involved in the post-translational modification of the transcription factor AreA

Probab=99.12  E-value=1.7e-11  Score=111.13  Aligned_cols=149  Identities=20%  Similarity=0.188  Sum_probs=106.6

Q ss_pred             EEEEcCCChhHHHHHHHHHHcCCceEEEEecCCCCcccccccCCCeEEEEcc----------------------------
Q 017760           14 FLVTGGLGHVGSALCLELVRRGAYQVRAFDLRTNSPWSHLLINHGVHCIQGL----------------------------   65 (366)
Q Consensus        14 VlITGgtGfiG~~L~~~L~~~g~~~V~~~dr~~~~~~~~~~~~~~v~~i~gD----------------------------   65 (366)
                      |+||||||.+|+.+++.|++.+ ++|+++.|+.++.....+...+++.+.+|                            
T Consensus         1 I~V~GatG~~G~~v~~~L~~~~-~~V~~l~R~~~~~~~~~l~~~g~~vv~~d~~~~~~l~~al~g~d~v~~~~~~~~~~~   79 (233)
T PF05368_consen    1 ILVTGATGNQGRSVVRALLSAG-FSVRALVRDPSSDRAQQLQALGAEVVEADYDDPESLVAALKGVDAVFSVTPPSHPSE   79 (233)
T ss_dssp             EEEETTTSHHHHHHHHHHHHTT-GCEEEEESSSHHHHHHHHHHTTTEEEES-TT-HHHHHHHHTTCSEEEEESSCSCCCH
T ss_pred             CEEECCccHHHHHHHHHHHhCC-CCcEEEEeccchhhhhhhhcccceEeecccCCHHHHHHHHcCCceEEeecCcchhhh
Confidence            7999999999999999999988 69999999885544455556788888888                            


Q ss_pred             ------------------------------------------------ccCCCCCceEEEEeCCccccCCCCCCHHHHHH
Q 017760           66 ------------------------------------------------RKNNRKCLYTCAVRPAAIYGPGEERHLPRIVS   97 (366)
Q Consensus        66 ------------------------------------------------ks~~~~~l~~~ilRp~~iyGp~~~~~l~~~i~   97 (366)
                                                                      +..++.+++++++||+..+......+.+  ..
T Consensus        80 ~~~~~~li~Aa~~agVk~~v~ss~~~~~~~~~~~~p~~~~~~~k~~ie~~l~~~~i~~t~i~~g~f~e~~~~~~~~--~~  157 (233)
T PF05368_consen   80 LEQQKNLIDAAKAAGVKHFVPSSFGADYDESSGSEPEIPHFDQKAEIEEYLRESGIPYTIIRPGFFMENLLPPFAP--VV  157 (233)
T ss_dssp             HHHHHHHHHHHHHHT-SEEEESEESSGTTTTTTSTTHHHHHHHHHHHHHHHHHCTSEBEEEEE-EEHHHHHTTTHH--TT
T ss_pred             hhhhhhHHHhhhccccceEEEEEecccccccccccccchhhhhhhhhhhhhhhccccceeccccchhhhhhhhhcc--cc
Confidence                                                            1122348889999998765532111111  00


Q ss_pred             HHHcC-CCCeeecCCCcceece-eHHHHHHHHHHHHhccccCCCCCCCCCCC--CCccEEecCCCCCCHHHHHHHHHHhc
Q 017760           98 LAKLG-LVPFKIGEPSVKTDWI-YVDNLVLALILASMGLLDDIPGQKGRPIA--SGQPYFVSDGFPINTFEFIGPLLKTL  173 (366)
Q Consensus        98 ~~~~g-~~~~~~g~~~~~~~~v-~vdDla~a~~~a~~~l~~~~~~~~~~~~~--~g~~y~I~~~~~vs~~e~~~~l~~~l  173 (366)
                      ..... ......++++....++ +.+|++++...++.           ++..  .++.+++++ +.+|..|+++.+.+.+
T Consensus       158 ~~~~~~~~~~~~~~~~~~~~~~~~~~Dvg~~va~il~-----------~p~~~~~~~~~~~~~-~~~t~~eia~~~s~~~  225 (233)
T PF05368_consen  158 DIKKSKDVVTLPGPGNQKAVPVTDTRDVGRAVAAILL-----------DPEKHNNGKTIFLAG-ETLTYNEIAAILSKVL  225 (233)
T ss_dssp             CSCCTSSEEEEETTSTSEEEEEEHHHHHHHHHHHHHH-----------SGGGTTEEEEEEEGG-GEEEHHHHHHHHHHHH
T ss_pred             cccccceEEEEccCCCccccccccHHHHHHHHHHHHc-----------ChHHhcCCEEEEeCC-CCCCHHHHHHHHHHHH
Confidence            11111 1345667777777886 99999999999997           3333  467788765 7799999999999999


Q ss_pred             CCCC
Q 017760          174 DYDL  177 (366)
Q Consensus       174 g~~~  177 (366)
                      |.+.
T Consensus       226 G~~v  229 (233)
T PF05368_consen  226 GKKV  229 (233)
T ss_dssp             TSEE
T ss_pred             CCcc
Confidence            9763

NmrA is part of a system controlling nitrogen metabolite repression in fungi []. This family only contains a few sequences as iteration results in significant matches to other Rossmann fold families.; PDB: 2ZCV_A 2ZCU_A 2R6J_B 3C3X_A 2QZZ_B 2QYS_A 2QX7_A 2QW8_A 2R2G_B 3E5M_B ....

>PLN00141 Tic62-NAD(P)-related group II protein; Provisional

Probab=99.11  E-value=6.8e-10  Score=101.84  Aligned_cols=40  Identities=28%  Similarity=0.495  Sum_probs=34.7

Q ss_pred             ccccCCeEEEEcCCChhHHHHHHHHHHcCCceEEEEecCCC
Q 017760            7 EGIEGKTFLVTGGLGHVGSALCLELVRRGAYQVRAFDLRTN   47 (366)
Q Consensus         7 ~~~~~~~VlITGgtGfiG~~L~~~L~~~g~~~V~~~dr~~~   47 (366)
                      +...+++|+||||+|++|+++++.|+++| ++|+++.|++.
T Consensus        13 ~~~~~~~ilItGasG~iG~~l~~~L~~~g-~~V~~~~R~~~   52 (251)
T PLN00141         13 ENVKTKTVFVAGATGRTGKRIVEQLLAKG-FAVKAGVRDVD   52 (251)
T ss_pred             ccccCCeEEEECCCcHHHHHHHHHHHhCC-CEEEEEecCHH
Confidence            34557899999999999999999999999 58999987653

>PLN02260 probable rhamnose biosynthetic enzyme

Probab=99.09  E-value=5.8e-10  Score=116.43  Aligned_cols=96  Identities=15%  Similarity=0.085  Sum_probs=63.6

Q ss_pred             eceeHHHHHHHHHHHHhccccCCCCCCCCCCCCCccEEecCCCCCCHHHHHHHHHHhcCCCCCccccCHHHHHHHHHHHH
Q 017760          116 DWIYVDNLVLALILASMGLLDDIPGQKGRPIASGQPYFVSDGFPINTFEFIGPLLKTLDYDLPKSWLAVPHALFLGKVFS  195 (366)
Q Consensus       116 ~~v~vdDla~a~~~a~~~l~~~~~~~~~~~~~~g~~y~I~~~~~vs~~e~~~~l~~~lg~~~~~~~lp~~~~~~~a~~~e  195 (366)
                      +..+++|++.+++.+++           .  ..+++||+++++++|++|+++.+++.++.......++.....      +
T Consensus       564 ~~~~~~~~~~~~~~l~~-----------~--~~~giyni~~~~~~s~~e~a~~i~~~~~~~~~~~~~~~~~~~------~  624 (668)
T PLN02260        564 SMTVLDELLPISIEMAK-----------R--NLRGIWNFTNPGVVSHNEILEMYKDYIDPGFKWSNFTLEEQA------K  624 (668)
T ss_pred             CceehhhHHHHHHHHHH-----------h--CCCceEEecCCCcCcHHHHHHHHHHhcCCcccccccCHHHhh------h
Confidence            46788999999888875           2  225799999999999999999999988522111111111000      0


Q ss_pred             HHHHhhhhccccccCCCCCCcHHhhhhhcccceecHHHHHHhcCCCCCCChHHHHHHHHH
Q 017760          196 FFYSVLYPWLNRWWLPQPLILPAEVYKVGVTHYFSLLKAKDELCYVPIVSPREGMAATIS  255 (366)
Q Consensus       196 ~~~~~~~~~~~~~~~~~p~l~~~ev~~~~~~~~~d~~ka~~~LG~~p~~~~~e~l~~~v~  255 (366)
                          ..       ..+.|           .. .+|++|+++.+|. +. +++++|++++.
T Consensus       625 ----~~-------~a~rp-----------~~-~l~~~k~~~~~~~-~~-~~~~~l~~~~~  659 (668)
T PLN02260        625 ----VI-------VAPRS-----------NN-EMDASKLKKEFPE-LL-SIKESLIKYVF  659 (668)
T ss_pred             ----Hh-------hCCCc-----------cc-cccHHHHHHhCcc-cc-chHHHHHHHHh
Confidence                00       00111           11 4899999999998 54 89999998874

>KOG3019 consensus Predicted nucleoside-diphosphate sugar epimerase [Nucleotide transport and metabolism]

Probab=99.03  E-value=2.1e-09  Score=93.90  Aligned_cols=103  Identities=20%  Similarity=0.152  Sum_probs=78.6

Q ss_pred             CCCceEEEEeCCccccCCCCCCHHHHHHHHHcCCCCeeecCCCcceeceeHHHHHHHHHHHHhccccCCCCCCCCCCCCC
Q 017760           70 RKCLYTCAVRPAAIYGPGEERHLPRIVSLAKLGLVPFKIGEPSVKTDWIYVDNLVLALILASMGLLDDIPGQKGRPIASG  149 (366)
Q Consensus        70 ~~~l~~~ilRp~~iyGp~~~~~l~~~i~~~~~g~~~~~~g~~~~~~~~v~vdDla~a~~~a~~~l~~~~~~~~~~~~~~g  149 (366)
                      ....+++++|.+.|.|.+.. .+..++--.+.|.- ...|+|++.+.|||++|++..+..+++           ++...|
T Consensus       169 ~~~~r~~~iR~GvVlG~gGG-a~~~M~lpF~~g~G-GPlGsG~Q~fpWIHv~DL~~li~~ale-----------~~~v~G  235 (315)
T KOG3019|consen  169 NKDVRVALIRIGVVLGKGGG-ALAMMILPFQMGAG-GPLGSGQQWFPWIHVDDLVNLIYEALE-----------NPSVKG  235 (315)
T ss_pred             CcceeEEEEEEeEEEecCCc-chhhhhhhhhhccC-CcCCCCCeeeeeeehHHHHHHHHHHHh-----------cCCCCc
Confidence            34578999999999999865 33333333333332 236899999999999999999999998           444444


Q ss_pred             ccEEecCCCCCCHHHHHHHHHHhcCCCCCccccCHHHH
Q 017760          150 QPYFVSDGFPINTFEFIGPLLKTLDYDLPKSWLAVPHA  187 (366)
Q Consensus       150 ~~y~I~~~~~vs~~e~~~~l~~~lg~~~~~~~lp~~~~  187 (366)
                       +.|-..+++++..||.+.+.+.++.+ ..+.+|..+.
T Consensus       236 -ViNgvAP~~~~n~Ef~q~lg~aL~Rp-~~~pvP~fvv  271 (315)
T KOG3019|consen  236 -VINGVAPNPVRNGEFCQQLGSALSRP-SWLPVPDFVV  271 (315)
T ss_pred             -eecccCCCccchHHHHHHHHHHhCCC-cccCCcHHHH
Confidence             88888999999999999999999966 4455665544

>PRK12825 fabG 3-ketoacyl-(acyl-carrier-protein) reductase; Provisional

Probab=98.98  E-value=3.4e-09  Score=96.15  Aligned_cols=72  Identities=13%  Similarity=0.039  Sum_probs=47.4

Q ss_pred             CCceEEEEeCCccccCCCCCCHHHHHHHHHcCCCCeeecCCCcceeceeHHHHHHHHHHHHhccccCCCCCCCCCCCCCc
Q 017760           71 KCLYTCAVRPAAIYGPGEERHLPRIVSLAKLGLVPFKIGEPSVKTDWIYVDNLVLALILASMGLLDDIPGQKGRPIASGQ  150 (366)
Q Consensus        71 ~~l~~~ilRp~~iyGp~~~~~l~~~i~~~~~g~~~~~~g~~~~~~~~v~vdDla~a~~~a~~~l~~~~~~~~~~~~~~g~  150 (366)
                      .+++++++||+.++|+............   ...      ......+++.+|+++++..+++.         ......|+
T Consensus       177 ~~i~~~~i~pg~~~~~~~~~~~~~~~~~---~~~------~~~~~~~~~~~dva~~~~~~~~~---------~~~~~~g~  238 (249)
T PRK12825        177 YGITVNMVAPGDIDTDMKEATIEEAREA---KDA------ETPLGRSGTPEDIARAVAFLCSD---------ASDYITGQ  238 (249)
T ss_pred             cCeEEEEEEECCccCCccccccchhHHh---hhc------cCCCCCCcCHHHHHHHHHHHhCc---------cccCcCCC
Confidence            5799999999999999754332211111   100      01123389999999999988852         02245689


Q ss_pred             cEEecCCCCC
Q 017760          151 PYFVSDGFPI  160 (366)
Q Consensus       151 ~y~I~~~~~v  160 (366)
                      .|+++++.++
T Consensus       239 ~~~i~~g~~~  248 (249)
T PRK12825        239 VIEVTGGVDV  248 (249)
T ss_pred             EEEeCCCEee
Confidence            9999988654

>PRK12429 3-hydroxybutyrate dehydrogenase; Provisional

Probab=98.97  E-value=7.8e-10  Score=101.25  Aligned_cols=39  Identities=36%  Similarity=0.583  Sum_probs=34.6

Q ss_pred             ccCCeEEEEcCCChhHHHHHHHHHHcCCceEEEEecCCCC
Q 017760            9 IEGKTFLVTGGLGHVGSALCLELVRRGAYQVRAFDLRTNS   48 (366)
Q Consensus         9 ~~~~~VlITGgtGfiG~~L~~~L~~~g~~~V~~~dr~~~~   48 (366)
                      +++++++||||+|++|++++++|+++|+ +|++++|++..
T Consensus         2 ~~~~~vlItG~sg~iG~~la~~l~~~g~-~v~~~~r~~~~   40 (258)
T PRK12429          2 LKGKVALVTGAASGIGLEIALALAKEGA-KVVIADLNDEA   40 (258)
T ss_pred             CCCCEEEEECCCchHHHHHHHHHHHCCC-eEEEEeCCHHH
Confidence            4568999999999999999999999995 89999997643

>PRK13394 3-hydroxybutyrate dehydrogenase; Provisional

Probab=98.96  E-value=1.3e-09  Score=99.99  Aligned_cols=38  Identities=42%  Similarity=0.657  Sum_probs=34.0

Q ss_pred             ccCCeEEEEcCCChhHHHHHHHHHHcCCceEEEEecCCC
Q 017760            9 IEGKTFLVTGGLGHVGSALCLELVRRGAYQVRAFDLRTN   47 (366)
Q Consensus         9 ~~~~~VlITGgtGfiG~~L~~~L~~~g~~~V~~~dr~~~   47 (366)
                      +++++++||||+|++|+++++.|++.|+ +|++++|++.
T Consensus         5 ~~~~~vlItGasg~iG~~la~~l~~~G~-~v~~~~r~~~   42 (262)
T PRK13394          5 LNGKTAVVTGAASGIGKEIALELARAGA-AVAIADLNQD   42 (262)
T ss_pred             CCCCEEEEECCCChHHHHHHHHHHHCCC-eEEEEeCChH
Confidence            4568999999999999999999999995 8999988763

>PRK05653 fabG 3-ketoacyl-(acyl-carrier-protein) reductase; Validated

Probab=98.95  E-value=6.9e-09  Score=93.98  Aligned_cols=39  Identities=38%  Similarity=0.600  Sum_probs=34.2

Q ss_pred             cccCCeEEEEcCCChhHHHHHHHHHHcCCceEEEEecCCC
Q 017760            8 GIEGKTFLVTGGLGHVGSALCLELVRRGAYQVRAFDLRTN   47 (366)
Q Consensus         8 ~~~~~~VlITGgtGfiG~~L~~~L~~~g~~~V~~~dr~~~   47 (366)
                      +|++++|+||||+|++|.++++.|.++|+ +|++++|++.
T Consensus         2 ~~~~~~ilItGasg~iG~~l~~~l~~~g~-~v~~~~r~~~   40 (246)
T PRK05653          2 SLQGKTALVTGASRGIGRAIALRLAADGA-KVVIYDSNEE   40 (246)
T ss_pred             CCCCCEEEEECCCcHHHHHHHHHHHHCCC-EEEEEeCChh
Confidence            34567999999999999999999999995 8999998754

>PF07993 NAD_binding_4: Male sterility protein; InterPro: IPR013120 This family represents the C-terminal NAD-binding region of the male sterility protein from Arabidopsis and Drosophila

Probab=98.94  E-value=6.6e-10  Score=101.91  Aligned_cols=57  Identities=26%  Similarity=0.313  Sum_probs=32.2

Q ss_pred             CCceEEEEeCCccccCCCC------C-CHHHHHHHHHcCCCCeeecCCCcceeceeHHHHHHHH
Q 017760           71 KCLYTCAVRPAAIYGPGEE------R-HLPRIVSLAKLGLVPFKIGEPSVKTDWIYVDNLVLAL  127 (366)
Q Consensus        71 ~~l~~~ilRp~~iyGp~~~------~-~l~~~i~~~~~g~~~~~~g~~~~~~~~v~vdDla~a~  127 (366)
                      .+++++|+||+.|+|....      . ....+...+..|..+...++++...|++.||.+|+++
T Consensus       186 ~g~p~~I~Rp~~i~g~~~~G~~~~~~~~~~~~~~~~~~~~~p~~~~~~~~~~d~vPVD~va~aI  249 (249)
T PF07993_consen  186 HGLPVTIYRPGIIVGDSRTGWWNSDDFFPYLLRSCIALGAFPDLPGDPDARLDLVPVDYVARAI  249 (249)
T ss_dssp             H---EEEEEE-EEE-SSSSS---TTBHHHHHHHHHHHH-EEES-SB---TT--EEEHHHHHHHH
T ss_pred             CCceEEEEecCcccccCCCceeeccchHHHHHHHHHHcCCcccccCCCCceEeEECHHHHHhhC
Confidence            4899999999999994322      2 2234445566677666677777789999999999986

A sequence-related jojoba acyl CoA reductase is also included.; PDB: 4DQV_A.

>PRK06482 short chain dehydrogenase; Provisional

Probab=98.94  E-value=4.1e-09  Score=97.84  Aligned_cols=82  Identities=13%  Similarity=0.088  Sum_probs=55.1

Q ss_pred             CCceEEEEeCCcc---ccCCCCC----------CHHHHHHHHHcCCCCeeecCCCcceeceeHHHHHHHHHHHHhccccC
Q 017760           71 KCLYTCAVRPAAI---YGPGEER----------HLPRIVSLAKLGLVPFKIGEPSVKTDWIYVDNLVLALILASMGLLDD  137 (366)
Q Consensus        71 ~~l~~~ilRp~~i---yGp~~~~----------~l~~~i~~~~~g~~~~~~g~~~~~~~~v~vdDla~a~~~a~~~l~~~  137 (366)
                      .+++++++||+.+   ||++...          ....+...+..+..          .-+.+++|++++++.+++     
T Consensus       169 ~gi~v~~v~pg~~~t~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~----------~~~~d~~~~~~a~~~~~~-----  233 (276)
T PRK06482        169 FGIEFTIVEPGPARTNFGAGLDRGAPLDAYDDTPVGDLRRALADGSF----------AIPGDPQKMVQAMIASAD-----  233 (276)
T ss_pred             cCcEEEEEeCCccccCCcccccccCCCccccchhhHHHHHHHhhccC----------CCCCCHHHHHHHHHHHHc-----
Confidence            5889999999887   7654321          01122222222221          113578999999999985     


Q ss_pred             CCCCCCCCCCCCccEEecCCCCCCHHHHHHHHHHhcC
Q 017760          138 IPGQKGRPIASGQPYFVSDGFPINTFEFIGPLLKTLD  174 (366)
Q Consensus       138 ~~~~~~~~~~~g~~y~I~~~~~vs~~e~~~~l~~~lg  174 (366)
                            . ...+..||+++++..+..|+++.+.+.++
T Consensus       234 ------~-~~~~~~~~~g~~~~~~~~~~~~~~~~~~~  263 (276)
T PRK06482        234 ------Q-TPAPRRLTLGSDAYASIRAALSERLAALE  263 (276)
T ss_pred             ------C-CCCCeEEecChHHHHHHHHHHHHHHHHHH
Confidence                  2 23356799999998999999888888775

>KOG1221 consensus Acyl-CoA reductase [Lipid transport and metabolism]

Probab=98.93  E-value=4.8e-09  Score=102.35  Aligned_cols=101  Identities=19%  Similarity=0.211  Sum_probs=72.9

Q ss_pred             CCCCCceEEEEeCCccccCCCCCCHHH---------HHHHHHcCCCCeeecCCCcceeceeHHHHHHHHHHHHhccccCC
Q 017760           68 NNRKCLYTCAVRPAAIYGPGEERHLPR---------IVSLAKLGLVPFKIGEPSVKTDWIYVDNLVLALILASMGLLDDI  138 (366)
Q Consensus        68 ~~~~~l~~~ilRp~~iyGp~~~~~l~~---------~i~~~~~g~~~~~~g~~~~~~~~v~vdDla~a~~~a~~~l~~~~  138 (366)
                      ...++++.+|+||+.|......++...         ++-...+|.......|++...|.|.||.+|.+.+.++-+-..+ 
T Consensus       221 ~~~~~lPivIiRPsiI~st~~EP~pGWidn~~gp~g~i~g~gkGvlr~~~~d~~~~adiIPvD~vvN~~ia~~~~~~~~-  299 (467)
T KOG1221|consen  221 KEAENLPLVIIRPSIITSTYKEPFPGWIDNLNGPDGVIIGYGKGVLRCFLVDPKAVADIIPVDMVVNAMIASAWQHAGN-  299 (467)
T ss_pred             hhccCCCeEEEcCCceeccccCCCCCccccCCCCceEEEEeccceEEEEEEccccccceeeHHHHHHHHHHHHHHHhcc-
Confidence            566799999999999999865433222         2223345666666789999999999999999999776321111 


Q ss_pred             CCCCCCCCCCCccEEecCC--CCCCHHHHHHHHHHhcC
Q 017760          139 PGQKGRPIASGQPYFVSDG--FPINTFEFIGPLLKTLD  174 (366)
Q Consensus       139 ~~~~~~~~~~g~~y~I~~~--~~vs~~e~~~~l~~~lg  174 (366)
                           .+.....+||++.+  .++|+.++.+...+...
T Consensus       300 -----~~~~~~~IY~~tss~~Np~t~~~~~e~~~~~~~  332 (467)
T KOG1221|consen  300 -----SKEKTPPIYHLTSSNDNPVTWGDFIELALRYFE  332 (467)
T ss_pred             -----CCCCCCcEEEecccccCcccHHHHHHHHHHhcc
Confidence                 11133569999875  57999999999988875

>TIGR01963 PHB_DH 3-hydroxybutyrate dehydrogenase

Probab=98.93  E-value=1.5e-09  Score=99.09  Aligned_cols=36  Identities=44%  Similarity=0.560  Sum_probs=32.4

Q ss_pred             CCeEEEEcCCChhHHHHHHHHHHcCCceEEEEecCCC
Q 017760           11 GKTFLVTGGLGHVGSALCLELVRRGAYQVRAFDLRTN   47 (366)
Q Consensus        11 ~~~VlITGgtGfiG~~L~~~L~~~g~~~V~~~dr~~~   47 (366)
                      +++++||||+|++|+++++.|+++|+ +|++++|++.
T Consensus         1 ~~~vlItGa~g~lG~~l~~~l~~~g~-~v~~~~r~~~   36 (255)
T TIGR01963         1 GKTALVTGAASGIGLAIALALAAAGA-NVVVNDLGEA   36 (255)
T ss_pred             CCEEEEcCCcchHHHHHHHHHHHCCC-EEEEEeCCHH
Confidence            36899999999999999999999995 8999998753

This model represents a subfamily of the short chain dehydrogenases. Characterized members so far as 3-hydroxybutyrate dehydrogenases and are found in species that accumulate ester polmers called polyhydroxyalkanoic acids (PHAs) under certain conditions. Several members of the family are from species not known to accumulate PHAs, including Oceanobacillus iheyensis and Bacillus subtilis. However, polymer formation is not required for there be a role for 3-hydroxybutyrate dehydrogenase; it may be members of this family have the same function in those species.

>PRK12826 3-ketoacyl-(acyl-carrier-protein) reductase; Reviewed

Probab=98.92  E-value=5e-09  Score=95.36  Aligned_cols=37  Identities=35%  Similarity=0.573  Sum_probs=33.5

Q ss_pred             ccCCeEEEEcCCChhHHHHHHHHHHcCCceEEEEecCC
Q 017760            9 IEGKTFLVTGGLGHVGSALCLELVRRGAYQVRAFDLRT   46 (366)
Q Consensus         9 ~~~~~VlITGgtGfiG~~L~~~L~~~g~~~V~~~dr~~   46 (366)
                      +++++|+||||+|++|.++++.|+++|+ +|++++|+.
T Consensus         4 ~~~~~ilItGasg~iG~~l~~~l~~~g~-~V~~~~r~~   40 (251)
T PRK12826          4 LEGRVALVTGAARGIGRAIAVRLAADGA-EVIVVDICG   40 (251)
T ss_pred             CCCCEEEEcCCCCcHHHHHHHHHHHCCC-EEEEEeCCH
Confidence            4567999999999999999999999995 899999874

>PRK07074 short chain dehydrogenase; Provisional

Probab=98.91  E-value=4.2e-09  Score=96.58  Aligned_cols=82  Identities=17%  Similarity=0.137  Sum_probs=54.5

Q ss_pred             CceEEEEeCCccccCCCCCC---HHHHHHHHHcCCCCeeecCCCcceeceeHHHHHHHHHHHHhccccCCCCCCCCCCCC
Q 017760           72 CLYTCAVRPAAIYGPGEERH---LPRIVSLAKLGLVPFKIGEPSVKTDWIYVDNLVLALILASMGLLDDIPGQKGRPIAS  148 (366)
Q Consensus        72 ~l~~~ilRp~~iyGp~~~~~---l~~~i~~~~~g~~~~~~g~~~~~~~~v~vdDla~a~~~a~~~l~~~~~~~~~~~~~~  148 (366)
                      +++++++||+.++++.....   .+.+......         .....++++++|++++++.++..         ......
T Consensus       170 gi~v~~v~pg~v~t~~~~~~~~~~~~~~~~~~~---------~~~~~~~~~~~d~a~~~~~l~~~---------~~~~~~  231 (257)
T PRK07074        170 GIRANAVAPGTVKTQAWEARVAANPQVFEELKK---------WYPLQDFATPDDVANAVLFLASP---------AARAIT  231 (257)
T ss_pred             CeEEEEEEeCcCCcchhhcccccChHHHHHHHh---------cCCCCCCCCHHHHHHHHHHHcCc---------hhcCcC
Confidence            57778888888877743211   1112221111         11236789999999999999851         123456


Q ss_pred             CccEEecCCCCCCHHHHHHHHHH
Q 017760          149 GQPYFVSDGFPINTFEFIGPLLK  171 (366)
Q Consensus       149 g~~y~I~~~~~vs~~e~~~~l~~  171 (366)
                      |+.+++.+|...++.|+.+.+-+
T Consensus       232 g~~~~~~~g~~~~~~~~~~~~~~  254 (257)
T PRK07074        232 GVCLPVDGGLTAGNREMARTLTL  254 (257)
T ss_pred             CcEEEeCCCcCcCChhhhhhhcc
Confidence            88999999999999999887754

>PRK07067 sorbitol dehydrogenase; Provisional

Probab=98.88  E-value=4.1e-09  Score=96.71  Aligned_cols=38  Identities=29%  Similarity=0.508  Sum_probs=33.8

Q ss_pred             ccCCeEEEEcCCChhHHHHHHHHHHcCCceEEEEecCCC
Q 017760            9 IEGKTFLVTGGLGHVGSALCLELVRRGAYQVRAFDLRTN   47 (366)
Q Consensus         9 ~~~~~VlITGgtGfiG~~L~~~L~~~g~~~V~~~dr~~~   47 (366)
                      .++++++||||+|++|.++++.|.++|+ +|++++++..
T Consensus         4 l~~~~vlItGas~~iG~~ia~~l~~~G~-~v~~~~r~~~   41 (257)
T PRK07067          4 LQGKVALLTGAASGIGEAVAERYLAEGA-RVVIADIKPA   41 (257)
T ss_pred             CCCCEEEEeCCCchHHHHHHHHHHHcCC-EEEEEcCCHH
Confidence            4467899999999999999999999995 8999988754

>PRK08263 short chain dehydrogenase; Provisional

Probab=98.83  E-value=2.7e-09  Score=99.09  Aligned_cols=37  Identities=27%  Similarity=0.282  Sum_probs=33.0

Q ss_pred             cCCeEEEEcCCChhHHHHHHHHHHcCCceEEEEecCCC
Q 017760           10 EGKTFLVTGGLGHVGSALCLELVRRGAYQVRAFDLRTN   47 (366)
Q Consensus        10 ~~~~VlITGgtGfiG~~L~~~L~~~g~~~V~~~dr~~~   47 (366)
                      ++++|+||||+|++|+++++.|.++| ++|++++|++.
T Consensus         2 ~~k~vlItGasg~iG~~~a~~l~~~g-~~V~~~~r~~~   38 (275)
T PRK08263          2 MEKVWFITGASRGFGRAWTEAALERG-DRVVATARDTA   38 (275)
T ss_pred             CCCEEEEeCCCChHHHHHHHHHHHCC-CEEEEEECCHH
Confidence            45789999999999999999999999 58999998753

>PRK05875 short chain dehydrogenase; Provisional

Probab=98.82  E-value=3.8e-08  Score=91.29  Aligned_cols=37  Identities=32%  Similarity=0.503  Sum_probs=33.7

Q ss_pred             ccCCeEEEEcCCChhHHHHHHHHHHcCCceEEEEecCC
Q 017760            9 IEGKTFLVTGGLGHVGSALCLELVRRGAYQVRAFDLRT   46 (366)
Q Consensus         9 ~~~~~VlITGgtGfiG~~L~~~L~~~g~~~V~~~dr~~   46 (366)
                      +++++++||||+|++|+++++.|.++|+ +|++++|+.
T Consensus         5 ~~~k~vlItGasg~IG~~la~~l~~~G~-~V~~~~r~~   41 (276)
T PRK05875          5 FQDRTYLVTGGGSGIGKGVAAGLVAAGA-AVMIVGRNP   41 (276)
T ss_pred             CCCCEEEEECCCcHHHHHHHHHHHHCCC-eEEEEeCCH
Confidence            5568999999999999999999999995 899999874

>KOG2774 consensus NAD dependent epimerase [General function prediction only]

Probab=98.81  E-value=1.3e-07  Score=83.21  Aligned_cols=207  Identities=13%  Similarity=0.070  Sum_probs=133.7

Q ss_pred             ccCCeEEEEcCCChhHHHHHHHHHHc-CCceEEEEecCCCCcccccc---------cCCCeEEEEcc-------------
Q 017760            9 IEGKTFLVTGGLGHVGSALCLELVRR-GAYQVRAFDLRTNSPWSHLL---------INHGVHCIQGL-------------   65 (366)
Q Consensus         9 ~~~~~VlITGgtGfiG~~L~~~L~~~-g~~~V~~~dr~~~~~~~~~~---------~~~~v~~i~gD-------------   65 (366)
                      ....+|+||||.|.+|..++..|... |-..|+.-|+.+++...-..         ..++.+-+..|             
T Consensus        42 ~~~PrvLITG~LGQLG~~~A~LLR~~yGs~~VILSDI~KPp~~V~~~GPyIy~DILD~K~L~eIVVn~RIdWL~HfSALL  121 (366)
T KOG2774|consen   42 QKAPRVLITGSLGQLGRGLASLLRYMYGSECVILSDIVKPPANVTDVGPYIYLDILDQKSLEEIVVNKRIDWLVHFSALL  121 (366)
T ss_pred             CCCCeEEEecchHHHhHHHHHHHHHHhCCccEehhhccCCchhhcccCCchhhhhhccccHHHhhcccccceeeeHHHHH
Confidence            34578999999999999999998865 65579998988776432111         11222222222             


Q ss_pred             --------------------------------------------ccCCCCCceEEEEeCCccccCCC-------------
Q 017760           66 --------------------------------------------RKNNRKCLYTCAVRPAAIYGPGE-------------   88 (366)
Q Consensus        66 --------------------------------------------ks~~~~~l~~~ilRp~~iyGp~~-------------   88 (366)
                                                                  .|-+....+.||=||-.|||...             
T Consensus       122 SAvGE~NVpLA~~VNI~GvHNil~vAa~~kL~iFVPSTIGAFGPtSPRNPTPdltIQRPRTIYGVSKVHAEL~GEy~~hr  201 (366)
T KOG2774|consen  122 SAVGETNVPLALQVNIRGVHNILQVAAKHKLKVFVPSTIGAFGPTSPRNPTPDLTIQRPRTIYGVSKVHAELLGEYFNHR  201 (366)
T ss_pred             HHhcccCCceeeeecchhhhHHHHHHHHcCeeEeecccccccCCCCCCCCCCCeeeecCceeechhHHHHHHHHHHHHhh
Confidence                                                        22344456789999999999531             


Q ss_pred             ------------------------CCCHHHHHHHHHcCCCCeeecCCCcceeceeHHHHHHHHHHHHhccccCCCCCCCC
Q 017760           89 ------------------------ERHLPRIVSLAKLGLVPFKIGEPSVKTDWIYVDNLVLALILASMGLLDDIPGQKGR  144 (366)
Q Consensus        89 ------------------------~~~l~~~i~~~~~g~~~~~~g~~~~~~~~v~vdDla~a~~~a~~~l~~~~~~~~~~  144 (366)
                                              +-.+.-+-.+..+|+. .-+-.++....+.|..||-.+++..+.+   +      +
T Consensus       202 Fg~dfr~~rfPg~is~~~pgggttdya~A~f~~Al~~gk~-tCylrpdtrlpmmy~~dc~~~~~~~~~a---~------~  271 (366)
T KOG2774|consen  202 FGVDFRSMRFPGIISATKPGGGTTDYAIAIFYDALQKGKH-TCYLRPDTRLPMMYDTDCMASVIQLLAA---D------S  271 (366)
T ss_pred             cCccceecccCcccccCCCCCCcchhHHHHHHHHHHcCCc-ccccCCCccCceeehHHHHHHHHHHHhC---C------H
Confidence                                    0012234445567764 3344567788999999999999888863   1      4


Q ss_pred             CCCCCccEEecCCCCCCHHHHHHHHHHhcCCCCCccccCHHHHHHHHHHHHHHHHhhhhccccccCCCCCCcHHhhhhhc
Q 017760          145 PIASGQPYFVSDGFPINTFEFIGPLLKTLDYDLPKSWLAVPHALFLGKVFSFFYSVLYPWLNRWWLPQPLILPAEVYKVG  224 (366)
Q Consensus       145 ~~~~g~~y~I~~~~~vs~~e~~~~l~~~lg~~~~~~~lp~~~~~~~a~~~e~~~~~~~~~~~~~~~~~p~l~~~ev~~~~  224 (366)
                      .....++||+++- ..|.+|++..+.+.+..    +.+.+.                           + -++ +.-.-.
T Consensus       272 ~~lkrr~ynvt~~-sftpee~~~~~~~~~p~----~~i~y~---------------------------~-~sr-q~iad~  317 (366)
T KOG2774|consen  272 QSLKRRTYNVTGF-SFTPEEIADAIRRVMPG----FEIDYD---------------------------I-CTR-QSIADS  317 (366)
T ss_pred             HHhhhheeeecee-ccCHHHHHHHHHhhCCC----ceeecc---------------------------c-chh-hhhhhh
Confidence            4556689999754 58999999999887642    111100                           0 001 111223


Q ss_pred             ccceecHHHHHHhcCCCCCCChHHHHHHHHHHHHh
Q 017760          225 VTHYFSLLKAKDELCYVPIVSPREGMAATISYWQD  259 (366)
Q Consensus       225 ~~~~~d~~ka~~~LG~~p~~~~~e~l~~~v~~~~~  259 (366)
                      ++..+|.+.++++.-|+-.+++-.-+.-++.-.+.
T Consensus       318 wp~~~dds~ar~~wh~~h~~~l~~~i~~~i~~~~~  352 (366)
T KOG2774|consen  318 WPMSLDDSEARTEWHEKHSLHLLSIISTVVAVHKS  352 (366)
T ss_pred             cccccCchhHhhHHHHhhhhhHHHHHHHHHHHHHh
Confidence            45578999999999999888777766666655443

>PRK12829 short chain dehydrogenase; Provisional

Probab=98.81  E-value=4.1e-09  Score=96.82  Aligned_cols=38  Identities=32%  Similarity=0.558  Sum_probs=34.1

Q ss_pred             cccCCeEEEEcCCChhHHHHHHHHHHcCCceEEEEecCC
Q 017760            8 GIEGKTFLVTGGLGHVGSALCLELVRRGAYQVRAFDLRT   46 (366)
Q Consensus         8 ~~~~~~VlITGgtGfiG~~L~~~L~~~g~~~V~~~dr~~   46 (366)
                      .+++++++||||+|++|+++++.|+++|+ +|++++|++
T Consensus         8 ~~~~~~vlItGa~g~iG~~~a~~L~~~g~-~V~~~~r~~   45 (264)
T PRK12829          8 PLDGLRVLVTGGASGIGRAIAEAFAEAGA-RVHVCDVSE   45 (264)
T ss_pred             ccCCCEEEEeCCCCcHHHHHHHHHHHCCC-EEEEEeCCH
Confidence            35668999999999999999999999995 899999865

>PRK05876 short chain dehydrogenase; Provisional

Probab=98.76  E-value=3.7e-08  Score=91.64  Aligned_cols=39  Identities=36%  Similarity=0.538  Sum_probs=34.5

Q ss_pred             cccCCeEEEEcCCChhHHHHHHHHHHcCCceEEEEecCCC
Q 017760            8 GIEGKTFLVTGGLGHVGSALCLELVRRGAYQVRAFDLRTN   47 (366)
Q Consensus         8 ~~~~~~VlITGgtGfiG~~L~~~L~~~g~~~V~~~dr~~~   47 (366)
                      .+++++++||||+|+||+++++.|.++|+ +|++.+++.+
T Consensus         3 ~~~~k~vlVTGas~gIG~ala~~La~~G~-~Vv~~~r~~~   41 (275)
T PRK05876          3 GFPGRGAVITGGASGIGLATGTEFARRGA-RVVLGDVDKP   41 (275)
T ss_pred             CcCCCEEEEeCCCchHHHHHHHHHHHCCC-EEEEEeCCHH
Confidence            35678999999999999999999999996 8999988753

>PRK12828 short chain dehydrogenase; Provisional

Probab=98.75  E-value=4.2e-08  Score=88.49  Aligned_cols=38  Identities=34%  Similarity=0.545  Sum_probs=34.0

Q ss_pred             ccCCeEEEEcCCChhHHHHHHHHHHcCCceEEEEecCCC
Q 017760            9 IEGKTFLVTGGLGHVGSALCLELVRRGAYQVRAFDLRTN   47 (366)
Q Consensus         9 ~~~~~VlITGgtGfiG~~L~~~L~~~g~~~V~~~dr~~~   47 (366)
                      +++++++||||+|++|+++++.|+++|+ +|++++|++.
T Consensus         5 ~~~k~vlItGatg~iG~~la~~l~~~G~-~v~~~~r~~~   42 (239)
T PRK12828          5 LQGKVVAITGGFGGLGRATAAWLAARGA-RVALIGRGAA   42 (239)
T ss_pred             CCCCEEEEECCCCcHhHHHHHHHHHCCC-eEEEEeCChH
Confidence            4468999999999999999999999995 8999998653

>PRK12823 benD 1,6-dihydroxycyclohexa-2,4-diene-1-carboxylate dehydrogenase; Provisional

Probab=98.72  E-value=1.1e-07  Score=87.34  Aligned_cols=37  Identities=30%  Similarity=0.456  Sum_probs=33.6

Q ss_pred             ccCCeEEEEcCCChhHHHHHHHHHHcCCceEEEEecCC
Q 017760            9 IEGKTFLVTGGLGHVGSALCLELVRRGAYQVRAFDLRT   46 (366)
Q Consensus         9 ~~~~~VlITGgtGfiG~~L~~~L~~~g~~~V~~~dr~~   46 (366)
                      +++++++||||+|++|+++++.|.++|+ +|++++|++
T Consensus         6 ~~~k~vlVtGas~gIG~~la~~l~~~G~-~v~~~~r~~   42 (260)
T PRK12823          6 FAGKVVVVTGAAQGIGRGVALRAAAEGA-RVVLVDRSE   42 (260)
T ss_pred             cCCCEEEEeCCCchHHHHHHHHHHHCCC-EEEEEeCch
Confidence            5568999999999999999999999995 899999874

>PRK12745 3-ketoacyl-(acyl-carrier-protein) reductase; Provisional

Probab=98.70  E-value=1.4e-07  Score=86.32  Aligned_cols=35  Identities=26%  Similarity=0.325  Sum_probs=31.9

Q ss_pred             CeEEEEcCCChhHHHHHHHHHHcCCceEEEEecCCC
Q 017760           12 KTFLVTGGLGHVGSALCLELVRRGAYQVRAFDLRTN   47 (366)
Q Consensus        12 ~~VlITGgtGfiG~~L~~~L~~~g~~~V~~~dr~~~   47 (366)
                      ++++||||+|++|+++++.|.++|+ +|++++++..
T Consensus         3 k~vlItG~sg~iG~~la~~L~~~g~-~vi~~~r~~~   37 (256)
T PRK12745          3 PVALVTGGRRGIGLGIARALAAAGF-DLAINDRPDD   37 (256)
T ss_pred             cEEEEeCCCchHHHHHHHHHHHCCC-EEEEEecCch
Confidence            6799999999999999999999995 8999998753

>PRK06914 short chain dehydrogenase; Provisional

Probab=98.66  E-value=1.1e-07  Score=88.48  Aligned_cols=37  Identities=30%  Similarity=0.286  Sum_probs=33.0

Q ss_pred             cCCeEEEEcCCChhHHHHHHHHHHcCCceEEEEecCCC
Q 017760           10 EGKTFLVTGGLGHVGSALCLELVRRGAYQVRAFDLRTN   47 (366)
Q Consensus        10 ~~~~VlITGgtGfiG~~L~~~L~~~g~~~V~~~dr~~~   47 (366)
                      ++++++||||+|++|+++++.|+++|+ +|++++|++.
T Consensus         2 ~~k~~lItGasg~iG~~la~~l~~~G~-~V~~~~r~~~   38 (280)
T PRK06914          2 NKKIAIVTGASSGFGLLTTLELAKKGY-LVIATMRNPE   38 (280)
T ss_pred             CCCEEEEECCCchHHHHHHHHHHhCCC-EEEEEeCCHH
Confidence            457899999999999999999999994 8999988753

>PRK06077 fabG 3-ketoacyl-(acyl-carrier-protein) reductase; Provisional

Probab=98.66  E-value=1.1e-07  Score=86.65  Aligned_cols=37  Identities=24%  Similarity=0.402  Sum_probs=31.7

Q ss_pred             ccCCeEEEEcCCChhHHHHHHHHHHcCCceEEEEecCC
Q 017760            9 IEGKTFLVTGGLGHVGSALCLELVRRGAYQVRAFDLRT   46 (366)
Q Consensus         9 ~~~~~VlITGgtGfiG~~L~~~L~~~g~~~V~~~dr~~   46 (366)
                      +++++++||||+|++|++++++|.++|+ +|++..++.
T Consensus         4 ~~~~~vlitGasg~iG~~l~~~l~~~g~-~v~~~~~~~   40 (252)
T PRK06077          4 LKDKVVVVTGSGRGIGRAIAVRLAKEGS-LVVVNAKKR   40 (252)
T ss_pred             CCCcEEEEeCCCChHHHHHHHHHHHCCC-EEEEEeCCC
Confidence            4568999999999999999999999995 888776543

>PRK07806 short chain dehydrogenase; Provisional

Probab=98.63  E-value=1.5e-07  Score=85.76  Aligned_cols=38  Identities=29%  Similarity=0.286  Sum_probs=33.7

Q ss_pred             ccCCeEEEEcCCChhHHHHHHHHHHcCCceEEEEecCCC
Q 017760            9 IEGKTFLVTGGLGHVGSALCLELVRRGAYQVRAFDLRTN   47 (366)
Q Consensus         9 ~~~~~VlITGgtGfiG~~L~~~L~~~g~~~V~~~dr~~~   47 (366)
                      +++++++||||+|++|+++++.|++.| ++|++++|+.+
T Consensus         4 ~~~k~vlItGasggiG~~l~~~l~~~G-~~V~~~~r~~~   41 (248)
T PRK07806          4 LPGKTALVTGSSRGIGADTAKILAGAG-AHVVVNYRQKA   41 (248)
T ss_pred             CCCcEEEEECCCCcHHHHHHHHHHHCC-CEEEEEeCCch
Confidence            456899999999999999999999999 48999988653

>PRK07523 gluconate 5-dehydrogenase; Provisional

Probab=98.63  E-value=1.2e-07  Score=86.76  Aligned_cols=38  Identities=32%  Similarity=0.377  Sum_probs=34.2

Q ss_pred             ccCCeEEEEcCCChhHHHHHHHHHHcCCceEEEEecCCC
Q 017760            9 IEGKTFLVTGGLGHVGSALCLELVRRGAYQVRAFDLRTN   47 (366)
Q Consensus         9 ~~~~~VlITGgtGfiG~~L~~~L~~~g~~~V~~~dr~~~   47 (366)
                      +++++++||||+|++|.+++++|+++|+ +|++++|++.
T Consensus         8 ~~~k~vlItGa~g~iG~~ia~~l~~~G~-~V~~~~r~~~   45 (255)
T PRK07523          8 LTGRRALVTGSSQGIGYALAEGLAQAGA-EVILNGRDPA   45 (255)
T ss_pred             CCCCEEEEECCcchHHHHHHHHHHHcCC-EEEEEeCCHH
Confidence            4578999999999999999999999995 8999998753

>PRK05557 fabG 3-ketoacyl-(acyl-carrier-protein) reductase; Validated

Probab=98.62  E-value=4.1e-07  Score=82.43  Aligned_cols=38  Identities=34%  Similarity=0.436  Sum_probs=33.2

Q ss_pred             ccCCeEEEEcCCChhHHHHHHHHHHcCCceEEEEecCCC
Q 017760            9 IEGKTFLVTGGLGHVGSALCLELVRRGAYQVRAFDLRTN   47 (366)
Q Consensus         9 ~~~~~VlITGgtGfiG~~L~~~L~~~g~~~V~~~dr~~~   47 (366)
                      +++++++||||+|++|+++++.|+++|+ +|+++.++..
T Consensus         3 ~~~~~vlItG~sg~iG~~l~~~l~~~G~-~v~~~~~~~~   40 (248)
T PRK05557          3 LEGKVALVTGASRGIGRAIAERLAAQGA-NVVINYASSE   40 (248)
T ss_pred             CCCCEEEEECCCchHHHHHHHHHHHCCC-EEEEEeCCch
Confidence            4568999999999999999999999995 8988877654

>PRK12935 acetoacetyl-CoA reductase; Provisional

Probab=98.62  E-value=2.7e-07  Score=83.99  Aligned_cols=36  Identities=33%  Similarity=0.498  Sum_probs=31.2

Q ss_pred             ccCCeEEEEcCCChhHHHHHHHHHHcCCceEEEEecC
Q 017760            9 IEGKTFLVTGGLGHVGSALCLELVRRGAYQVRAFDLR   45 (366)
Q Consensus         9 ~~~~~VlITGgtGfiG~~L~~~L~~~g~~~V~~~dr~   45 (366)
                      +++++++||||+|++|++++++|+++|+ +|++.+++
T Consensus         4 ~~~~~~lItG~s~~iG~~la~~l~~~g~-~v~~~~~~   39 (247)
T PRK12935          4 LNGKVAIVTGGAKGIGKAITVALAQEGA-KVVINYNS   39 (247)
T ss_pred             CCCCEEEEECCCCHHHHHHHHHHHHcCC-EEEEEcCC
Confidence            4568999999999999999999999995 88876554

>PRK12384 sorbitol-6-phosphate dehydrogenase; Provisional

Probab=98.62  E-value=5.6e-08  Score=89.21  Aligned_cols=36  Identities=28%  Similarity=0.494  Sum_probs=32.5

Q ss_pred             CCeEEEEcCCChhHHHHHHHHHHcCCceEEEEecCCC
Q 017760           11 GKTFLVTGGLGHVGSALCLELVRRGAYQVRAFDLRTN   47 (366)
Q Consensus        11 ~~~VlITGgtGfiG~~L~~~L~~~g~~~V~~~dr~~~   47 (366)
                      +++|+||||+|++|.++++.|.++|+ +|++++++..
T Consensus         2 ~k~ilItG~~~~IG~~la~~l~~~g~-~vi~~~r~~~   37 (259)
T PRK12384          2 NQVAVVIGGGQTLGAFLCHGLAEEGY-RVAVADINSE   37 (259)
T ss_pred             CCEEEEECCCcHHHHHHHHHHHHCCC-EEEEEECCHH
Confidence            46899999999999999999999995 8999998754

>PRK07774 short chain dehydrogenase; Provisional

Probab=98.60  E-value=4e-07  Score=82.95  Aligned_cols=38  Identities=32%  Similarity=0.499  Sum_probs=33.9

Q ss_pred             ccCCeEEEEcCCChhHHHHHHHHHHcCCceEEEEecCCC
Q 017760            9 IEGKTFLVTGGLGHVGSALCLELVRRGAYQVRAFDLRTN   47 (366)
Q Consensus         9 ~~~~~VlITGgtGfiG~~L~~~L~~~g~~~V~~~dr~~~   47 (366)
                      +++++++||||+|++|.+++++|.++| ++|++++|+..
T Consensus         4 ~~~k~vlItGasg~iG~~la~~l~~~g-~~vi~~~r~~~   41 (250)
T PRK07774          4 FDDKVAIVTGAAGGIGQAYAEALAREG-ASVVVADINAE   41 (250)
T ss_pred             cCCCEEEEECCCchHHHHHHHHHHHCC-CEEEEEeCCHH
Confidence            456899999999999999999999999 48999998753

>PRK08324 short chain dehydrogenase; Validated

Probab=98.59  E-value=1.8e-07  Score=97.87  Aligned_cols=38  Identities=39%  Similarity=0.515  Sum_probs=34.0

Q ss_pred             ccCCeEEEEcCCChhHHHHHHHHHHcCCceEEEEecCCC
Q 017760            9 IEGKTFLVTGGLGHVGSALCLELVRRGAYQVRAFDLRTN   47 (366)
Q Consensus         9 ~~~~~VlITGgtGfiG~~L~~~L~~~g~~~V~~~dr~~~   47 (366)
                      +.+++++||||+|++|.++++.|.+.|+ +|++++|+..
T Consensus       420 l~gk~vLVTGasggIG~~la~~L~~~Ga-~Vvl~~r~~~  457 (681)
T PRK08324        420 LAGKVALVTGAAGGIGKATAKRLAAEGA-CVVLADLDEE  457 (681)
T ss_pred             CCCCEEEEecCCCHHHHHHHHHHHHCcC-EEEEEeCCHH
Confidence            3568999999999999999999999996 8999998753

>PLN03209 translocon at the inner envelope of chloroplast subunit 62; Provisional

Probab=98.59  E-value=2.5e-07  Score=93.09  Aligned_cols=39  Identities=31%  Similarity=0.404  Sum_probs=34.6

Q ss_pred             cccCCeEEEEcCCChhHHHHHHHHHHcCCceEEEEecCCC
Q 017760            8 GIEGKTFLVTGGLGHVGSALCLELVRRGAYQVRAFDLRTN   47 (366)
Q Consensus         8 ~~~~~~VlITGgtGfiG~~L~~~L~~~g~~~V~~~dr~~~   47 (366)
                      .+++++|+||||+|++|++++++|+++| ++|++++|+..
T Consensus        77 ~~~gKvVLVTGATGgIG~aLAr~LLk~G-~~Vval~Rn~e  115 (576)
T PLN03209         77 TKDEDLAFVAGATGKVGSRTVRELLKLG-FRVRAGVRSAQ  115 (576)
T ss_pred             cCCCCEEEEECCCCHHHHHHHHHHHHCC-CeEEEEeCCHH
Confidence            4556889999999999999999999999 59999998754

>PRK07890 short chain dehydrogenase; Provisional

Probab=98.59  E-value=2.2e-07  Score=85.09  Aligned_cols=38  Identities=26%  Similarity=0.366  Sum_probs=34.0

Q ss_pred             ccCCeEEEEcCCChhHHHHHHHHHHcCCceEEEEecCCC
Q 017760            9 IEGKTFLVTGGLGHVGSALCLELVRRGAYQVRAFDLRTN   47 (366)
Q Consensus         9 ~~~~~VlITGgtGfiG~~L~~~L~~~g~~~V~~~dr~~~   47 (366)
                      +++++++||||+|+||+++++.|+++|+ +|++++|++.
T Consensus         3 l~~k~vlItGa~~~IG~~la~~l~~~G~-~V~~~~r~~~   40 (258)
T PRK07890          3 LKGKVVVVSGVGPGLGRTLAVRAARAGA-DVVLAARTAE   40 (258)
T ss_pred             cCCCEEEEECCCCcHHHHHHHHHHHcCC-EEEEEeCCHH
Confidence            4568999999999999999999999995 8999998753

>PRK07775 short chain dehydrogenase; Provisional

Probab=98.58  E-value=2.8e-07  Score=85.54  Aligned_cols=37  Identities=27%  Similarity=0.326  Sum_probs=33.0

Q ss_pred             ccCCeEEEEcCCChhHHHHHHHHHHcCCceEEEEecCC
Q 017760            9 IEGKTFLVTGGLGHVGSALCLELVRRGAYQVRAFDLRT   46 (366)
Q Consensus         9 ~~~~~VlITGgtGfiG~~L~~~L~~~g~~~V~~~dr~~   46 (366)
                      +.+++++||||+|++|+++++.|.++|+ +|++++++.
T Consensus         8 ~~~~~vlVtGa~g~iG~~la~~L~~~G~-~V~~~~r~~   44 (274)
T PRK07775          8 PDRRPALVAGASSGIGAATAIELAAAGF-PVALGARRV   44 (274)
T ss_pred             CCCCEEEEECCCchHHHHHHHHHHHCCC-EEEEEeCCH
Confidence            4567999999999999999999999995 899988764

>COG3320 Putative dehydrogenase domain of multifunctional non-ribosomal peptide synthetases and related enzymes [Secondary metabolites biosynthesis, transport, and catabolism]

Probab=98.58  E-value=5.1e-08  Score=91.98  Aligned_cols=54  Identities=26%  Similarity=0.343  Sum_probs=41.3

Q ss_pred             CeEEEEcCCChhHHHHHHHHHHcCCceEEEEecCCCCccc--------------ccccCCCeEEEEcc
Q 017760           12 KTFLVTGGLGHVGSALCLELVRRGAYQVRAFDLRTNSPWS--------------HLLINHGVHCIQGL   65 (366)
Q Consensus        12 ~~VlITGgtGfiG~~L~~~L~~~g~~~V~~~dr~~~~~~~--------------~~~~~~~v~~i~gD   65 (366)
                      ++|++||||||+|++|+.+|+.+---+|+|+.|..+.+..              .....+.++.+.||
T Consensus         1 ~~vlLTGATGFLG~yLl~eLL~~~~~kv~cLVRA~s~E~a~~RL~~~~~~~~~~~e~~~~ri~vv~gD   68 (382)
T COG3320           1 RNVLLTGATGFLGAYLLLELLDRSDAKVICLVRAQSDEAALARLEKTFDLYRHWDELSADRVEVVAGD   68 (382)
T ss_pred             CeEEEecCchHhHHHHHHHHHhcCCCcEEEEEecCCHHHHHHHHHHHhhhhhhhhhhhcceEEEEecc
Confidence            4799999999999999999998752389999998763311              11223678888888

>PRK06138 short chain dehydrogenase; Provisional

Probab=98.54  E-value=1.6e-07  Score=85.65  Aligned_cols=38  Identities=29%  Similarity=0.413  Sum_probs=33.6

Q ss_pred             ccCCeEEEEcCCChhHHHHHHHHHHcCCceEEEEecCCC
Q 017760            9 IEGKTFLVTGGLGHVGSALCLELVRRGAYQVRAFDLRTN   47 (366)
Q Consensus         9 ~~~~~VlITGgtGfiG~~L~~~L~~~g~~~V~~~dr~~~   47 (366)
                      +++++++||||+|++|+++++.|+++|+ +|++++|+..
T Consensus         3 ~~~k~~lItG~sg~iG~~la~~l~~~G~-~v~~~~r~~~   40 (252)
T PRK06138          3 LAGRVAIVTGAGSGIGRATAKLFAREGA-RVVVADRDAE   40 (252)
T ss_pred             CCCcEEEEeCCCchHHHHHHHHHHHCCC-eEEEecCCHH
Confidence            3567999999999999999999999994 8999988753

>PRK07231 fabG 3-ketoacyl-(acyl-carrier-protein) reductase; Provisional

Probab=98.54  E-value=5.8e-07  Score=81.78  Aligned_cols=38  Identities=29%  Similarity=0.473  Sum_probs=34.2

Q ss_pred             ccCCeEEEEcCCChhHHHHHHHHHHcCCceEEEEecCCC
Q 017760            9 IEGKTFLVTGGLGHVGSALCLELVRRGAYQVRAFDLRTN   47 (366)
Q Consensus         9 ~~~~~VlITGgtGfiG~~L~~~L~~~g~~~V~~~dr~~~   47 (366)
                      +++++++||||+|++|.++++.|+++|+ +|++++|++.
T Consensus         3 ~~~~~vlItGasg~iG~~l~~~l~~~G~-~V~~~~r~~~   40 (251)
T PRK07231          3 LEGKVAIVTGASSGIGEGIARRFAAEGA-RVVVTDRNEE   40 (251)
T ss_pred             cCCcEEEEECCCChHHHHHHHHHHHCCC-EEEEEeCCHH
Confidence            4567999999999999999999999995 8999999864

>PRK06180 short chain dehydrogenase; Provisional

Probab=98.53  E-value=3.1e-07  Score=85.34  Aligned_cols=38  Identities=26%  Similarity=0.234  Sum_probs=33.6

Q ss_pred             ccCCeEEEEcCCChhHHHHHHHHHHcCCceEEEEecCCC
Q 017760            9 IEGKTFLVTGGLGHVGSALCLELVRRGAYQVRAFDLRTN   47 (366)
Q Consensus         9 ~~~~~VlITGgtGfiG~~L~~~L~~~g~~~V~~~dr~~~   47 (366)
                      +.+++++||||+|++|+++++.|+++|. +|++++|++.
T Consensus         2 ~~~~~vlVtGasggiG~~la~~l~~~G~-~V~~~~r~~~   39 (277)
T PRK06180          2 SSMKTWLITGVSSGFGRALAQAALAAGH-RVVGTVRSEA   39 (277)
T ss_pred             CCCCEEEEecCCChHHHHHHHHHHhCcC-EEEEEeCCHH
Confidence            3467899999999999999999999994 8999998753

>PRK06182 short chain dehydrogenase; Validated

Probab=98.49  E-value=2.6e-07  Score=85.55  Aligned_cols=53  Identities=30%  Similarity=0.331  Sum_probs=39.8

Q ss_pred             cCCeEEEEcCCChhHHHHHHHHHHcCCceEEEEecCCCCcccccccCCCeEEEEcc
Q 017760           10 EGKTFLVTGGLGHVGSALCLELVRRGAYQVRAFDLRTNSPWSHLLINHGVHCIQGL   65 (366)
Q Consensus        10 ~~~~VlITGgtGfiG~~L~~~L~~~g~~~V~~~dr~~~~~~~~~~~~~~v~~i~gD   65 (366)
                      ++++++||||+|++|+++++.|.++| ++|++++|+....  ......+++++++|
T Consensus         2 ~~k~vlItGasggiG~~la~~l~~~G-~~V~~~~r~~~~l--~~~~~~~~~~~~~D   54 (273)
T PRK06182          2 QKKVALVTGASSGIGKATARRLAAQG-YTVYGAARRVDKM--EDLASLGVHPLSLD   54 (273)
T ss_pred             CCCEEEEECCCChHHHHHHHHHHHCC-CEEEEEeCCHHHH--HHHHhCCCeEEEee
Confidence            46799999999999999999999999 5899999875321  11222345566666

>PRK08220 2,3-dihydroxybenzoate-2,3-dehydrogenase; Validated

Probab=98.46  E-value=8.7e-07  Score=80.79  Aligned_cols=37  Identities=41%  Similarity=0.571  Sum_probs=33.6

Q ss_pred             ccCCeEEEEcCCChhHHHHHHHHHHcCCceEEEEecCC
Q 017760            9 IEGKTFLVTGGLGHVGSALCLELVRRGAYQVRAFDLRT   46 (366)
Q Consensus         9 ~~~~~VlITGgtGfiG~~L~~~L~~~g~~~V~~~dr~~   46 (366)
                      +++++++||||+|++|+++++.|+++|+ +|++++++.
T Consensus         6 ~~~k~vlItGas~~iG~~la~~l~~~G~-~v~~~~~~~   42 (252)
T PRK08220          6 FSGKTVWVTGAAQGIGYAVALAFVEAGA-KVIGFDQAF   42 (252)
T ss_pred             CCCCEEEEeCCCchHHHHHHHHHHHCCC-EEEEEecch
Confidence            4568999999999999999999999995 899998875

>PRK06123 short chain dehydrogenase; Provisional

Probab=98.45  E-value=1.6e-06  Score=78.83  Aligned_cols=35  Identities=31%  Similarity=0.381  Sum_probs=29.9

Q ss_pred             CCeEEEEcCCChhHHHHHHHHHHcCCceEEEEecCC
Q 017760           11 GKTFLVTGGLGHVGSALCLELVRRGAYQVRAFDLRT   46 (366)
Q Consensus        11 ~~~VlITGgtGfiG~~L~~~L~~~g~~~V~~~dr~~   46 (366)
                      +++++||||+|++|.+++++|.+.|+ +|+..++++
T Consensus         2 ~~~~lVtG~~~~iG~~~a~~l~~~G~-~vv~~~~~~   36 (248)
T PRK06123          2 RKVMIITGASRGIGAATALLAAERGY-AVCLNYLRN   36 (248)
T ss_pred             CCEEEEECCCchHHHHHHHHHHHCCC-eEEEecCCC
Confidence            35799999999999999999999995 787776543

>PRK08219 short chain dehydrogenase; Provisional

Probab=98.44  E-value=5.5e-07  Score=80.64  Aligned_cols=36  Identities=25%  Similarity=0.244  Sum_probs=32.0

Q ss_pred             cCCeEEEEcCCChhHHHHHHHHHHcCCceEEEEecCCC
Q 017760           10 EGKTFLVTGGLGHVGSALCLELVRRGAYQVRAFDLRTN   47 (366)
Q Consensus        10 ~~~~VlITGgtGfiG~~L~~~L~~~g~~~V~~~dr~~~   47 (366)
                      ++++++||||+|++|+++++.|+++ . +|++++|++.
T Consensus         2 ~~~~vlVtG~~g~iG~~l~~~l~~~-~-~V~~~~r~~~   37 (227)
T PRK08219          2 ERPTALITGASRGIGAAIARELAPT-H-TLLLGGRPAE   37 (227)
T ss_pred             CCCEEEEecCCcHHHHHHHHHHHhh-C-CEEEEeCCHH
Confidence            3578999999999999999999998 4 8999998753

>PRK12746 short chain dehydrogenase; Provisional

Probab=98.44  E-value=1.3e-06  Score=79.87  Aligned_cols=34  Identities=35%  Similarity=0.535  Sum_probs=29.7

Q ss_pred             ccCCeEEEEcCCChhHHHHHHHHHHcCCceEEEEe
Q 017760            9 IEGKTFLVTGGLGHVGSALCLELVRRGAYQVRAFD   43 (366)
Q Consensus         9 ~~~~~VlITGgtGfiG~~L~~~L~~~g~~~V~~~d   43 (366)
                      +++++++||||+|++|+++++.|+++|+ +|+++.
T Consensus         4 ~~~~~ilItGasg~iG~~la~~l~~~G~-~v~i~~   37 (254)
T PRK12746          4 LDGKVALVTGASRGIGRAIAMRLANDGA-LVAIHY   37 (254)
T ss_pred             CCCCEEEEeCCCchHHHHHHHHHHHCCC-EEEEEc
Confidence            4568999999999999999999999995 787753

>PRK07060 short chain dehydrogenase; Provisional

Probab=98.43  E-value=1.2e-06  Score=79.39  Aligned_cols=37  Identities=38%  Similarity=0.540  Sum_probs=33.5

Q ss_pred             ccCCeEEEEcCCChhHHHHHHHHHHcCCceEEEEecCC
Q 017760            9 IEGKTFLVTGGLGHVGSALCLELVRRGAYQVRAFDLRT   46 (366)
Q Consensus         9 ~~~~~VlITGgtGfiG~~L~~~L~~~g~~~V~~~dr~~   46 (366)
                      +++++++||||+|++|.++++.|.++|+ +|++++|+.
T Consensus         7 ~~~~~~lItGa~g~iG~~~a~~l~~~g~-~V~~~~r~~   43 (245)
T PRK07060          7 FSGKSVLVTGASSGIGRACAVALAQRGA-RVVAAARNA   43 (245)
T ss_pred             cCCCEEEEeCCcchHHHHHHHHHHHCCC-EEEEEeCCH
Confidence            5568999999999999999999999995 899999865

>PRK06194 hypothetical protein; Provisional

Probab=98.43  E-value=1.3e-06  Score=81.46  Aligned_cols=56  Identities=18%  Similarity=0.130  Sum_probs=41.0

Q ss_pred             ccCCeEEEEcCCChhHHHHHHHHHHcCCceEEEEecCCCCccc--cccc--CCCeEEEEcc
Q 017760            9 IEGKTFLVTGGLGHVGSALCLELVRRGAYQVRAFDLRTNSPWS--HLLI--NHGVHCIQGL   65 (366)
Q Consensus         9 ~~~~~VlITGgtGfiG~~L~~~L~~~g~~~V~~~dr~~~~~~~--~~~~--~~~v~~i~gD   65 (366)
                      +++++++||||+|++|+++++.|+++|+ +|++++++......  ..+.  ..++.++.+|
T Consensus         4 ~~~k~vlVtGasggIG~~la~~l~~~G~-~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~D   63 (287)
T PRK06194          4 FAGKVAVITGAASGFGLAFARIGAALGM-KLVLADVQQDALDRAVAELRAQGAEVLGVRTD   63 (287)
T ss_pred             CCCCEEEEeCCccHHHHHHHHHHHHCCC-EEEEEeCChHHHHHHHHHHHhcCCeEEEEECC
Confidence            4568999999999999999999999995 89999986432111  1111  2346667777

>PRK12939 short chain dehydrogenase; Provisional

Probab=98.42  E-value=2e-06  Score=78.23  Aligned_cols=38  Identities=34%  Similarity=0.385  Sum_probs=33.5

Q ss_pred             ccCCeEEEEcCCChhHHHHHHHHHHcCCceEEEEecCCC
Q 017760            9 IEGKTFLVTGGLGHVGSALCLELVRRGAYQVRAFDLRTN   47 (366)
Q Consensus         9 ~~~~~VlITGgtGfiG~~L~~~L~~~g~~~V~~~dr~~~   47 (366)
                      +++++++||||+|.+|+++++.|.++|+ +|+++++++.
T Consensus         5 ~~~~~vlItGa~g~iG~~la~~l~~~G~-~v~~~~r~~~   42 (250)
T PRK12939          5 LAGKRALVTGAARGLGAAFAEALAEAGA-TVAFNDGLAA   42 (250)
T ss_pred             CCCCEEEEeCCCChHHHHHHHHHHHcCC-EEEEEeCCHH
Confidence            4568999999999999999999999994 8999987653

>PRK06701 short chain dehydrogenase; Provisional

Probab=98.42  E-value=9e-07  Score=83.01  Aligned_cols=39  Identities=28%  Similarity=0.516  Sum_probs=34.2

Q ss_pred             cccCCeEEEEcCCChhHHHHHHHHHHcCCceEEEEecCCC
Q 017760            8 GIEGKTFLVTGGLGHVGSALCLELVRRGAYQVRAFDLRTN   47 (366)
Q Consensus         8 ~~~~~~VlITGgtGfiG~~L~~~L~~~g~~~V~~~dr~~~   47 (366)
                      .+++++++||||+|++|.+++++|+++|+ +|++++++..
T Consensus        43 ~~~~k~iLItGasggIG~~la~~l~~~G~-~V~l~~r~~~   81 (290)
T PRK06701         43 KLKGKVALITGGDSGIGRAVAVLFAKEGA-DIAIVYLDEH   81 (290)
T ss_pred             CCCCCEEEEeCCCcHHHHHHHHHHHHCCC-EEEEEeCCcc
Confidence            34568999999999999999999999995 8999988753

>PRK08217 fabG 3-ketoacyl-(acyl-carrier-protein) reductase; Provisional

Probab=98.42  E-value=1.6e-06  Score=78.94  Aligned_cols=37  Identities=30%  Similarity=0.564  Sum_probs=33.2

Q ss_pred             ccCCeEEEEcCCChhHHHHHHHHHHcCCceEEEEecCC
Q 017760            9 IEGKTFLVTGGLGHVGSALCLELVRRGAYQVRAFDLRT   46 (366)
Q Consensus         9 ~~~~~VlITGgtGfiG~~L~~~L~~~g~~~V~~~dr~~   46 (366)
                      +++++++||||+|++|.++++.|.++|. +|++++++.
T Consensus         3 ~~~~~~lItG~~g~iG~~~a~~l~~~G~-~vi~~~r~~   39 (253)
T PRK08217          3 LKDKVIVITGGAQGLGRAMAEYLAQKGA-KLALIDLNQ   39 (253)
T ss_pred             CCCCEEEEECCCchHHHHHHHHHHHCCC-EEEEEeCCH
Confidence            4568999999999999999999999995 899998875

>PRK09134 short chain dehydrogenase; Provisional

Probab=98.42  E-value=2.6e-06  Score=78.15  Aligned_cols=36  Identities=31%  Similarity=0.457  Sum_probs=31.6

Q ss_pred             cCCeEEEEcCCChhHHHHHHHHHHcCCceEEEEecCC
Q 017760           10 EGKTFLVTGGLGHVGSALCLELVRRGAYQVRAFDLRT   46 (366)
Q Consensus        10 ~~~~VlITGgtGfiG~~L~~~L~~~g~~~V~~~dr~~   46 (366)
                      ++++++||||+|++|+++++.|.++|+ +|++++++.
T Consensus         8 ~~k~vlItGas~giG~~la~~l~~~g~-~v~~~~~~~   43 (258)
T PRK09134          8 APRAALVTGAARRIGRAIALDLAAHGF-DVAVHYNRS   43 (258)
T ss_pred             CCCEEEEeCCCcHHHHHHHHHHHHCCC-EEEEEeCCC
Confidence            457899999999999999999999995 898887654

>TIGR03206 benzo_BadH 2-hydroxycyclohexanecarboxyl-CoA dehydrogenase

Probab=98.41  E-value=1.7e-06  Score=78.71  Aligned_cols=37  Identities=43%  Similarity=0.732  Sum_probs=33.2

Q ss_pred             cCCeEEEEcCCChhHHHHHHHHHHcCCceEEEEecCCC
Q 017760           10 EGKTFLVTGGLGHVGSALCLELVRRGAYQVRAFDLRTN   47 (366)
Q Consensus        10 ~~~~VlITGgtGfiG~~L~~~L~~~g~~~V~~~dr~~~   47 (366)
                      ++++++||||+|++|+++++.|++.|+ +|++++++..
T Consensus         2 ~~~~ilItGas~~iG~~la~~l~~~g~-~v~~~~r~~~   38 (250)
T TIGR03206         2 KDKTAIVTGGGGGIGGATCRRFAEEGA-KVAVFDLNRE   38 (250)
T ss_pred             CCCEEEEeCCCChHHHHHHHHHHHCCC-EEEEecCCHH
Confidence            468999999999999999999999995 8999988753

Members of this protein family are the enzyme 2-hydroxycyclohexanecarboxyl-CoA dehydrogenase. The enzymatic properties were confirmed experimentally in Rhodopseudomonas palustris; the enzyme is homotetrameric, and not sensitive to oxygen. This enzyme is part of proposed pathway for degradation of benzoyl-CoA to 3-hydroxypimeloyl-CoA that differs from the analogous in Thauera aromatica. It also may occur in degradation of the non-aromatic compound cyclohexane-1-carboxylate.

>PRK12827 short chain dehydrogenase; Provisional

Probab=98.40  E-value=3.3e-06  Score=76.63  Aligned_cols=35  Identities=34%  Similarity=0.686  Sum_probs=31.3

Q ss_pred             cCCeEEEEcCCChhHHHHHHHHHHcCCceEEEEecC
Q 017760           10 EGKTFLVTGGLGHVGSALCLELVRRGAYQVRAFDLR   45 (366)
Q Consensus        10 ~~~~VlITGgtGfiG~~L~~~L~~~g~~~V~~~dr~   45 (366)
                      ++++++||||+|++|+++++.|.++|+ +|+++++.
T Consensus         5 ~~~~ilItGasg~iG~~la~~l~~~g~-~v~~~~~~   39 (249)
T PRK12827          5 DSRRVLITGGSGGLGRAIAVRLAADGA-DVIVLDIH   39 (249)
T ss_pred             CCCEEEEECCCChHHHHHHHHHHHCCC-eEEEEcCc
Confidence            457899999999999999999999995 89998764

>COG2910 Putative NADH-flavin reductase [General function prediction only]

Probab=98.40  E-value=1.6e-06  Score=73.79  Aligned_cols=108  Identities=23%  Similarity=0.268  Sum_probs=78.6

Q ss_pred             CeEEEEcCCChhHHHHHHHHHHcCCceEEEEecCCCCcccccccCCCeEEEEcc--------------------------
Q 017760           12 KTFLVTGGLGHVGSALCLELVRRGAYQVRAFDLRTNSPWSHLLINHGVHCIQGL--------------------------   65 (366)
Q Consensus        12 ~~VlITGgtGfiG~~L~~~L~~~g~~~V~~~dr~~~~~~~~~~~~~~v~~i~gD--------------------------   65 (366)
                      |||.|.|+||.+|++++++..++| |+|+++.|++.+-...    +++...+.|                          
T Consensus         1 mKIaiIgAsG~~Gs~i~~EA~~RG-HeVTAivRn~~K~~~~----~~~~i~q~Difd~~~~a~~l~g~DaVIsA~~~~~~   75 (211)
T COG2910           1 MKIAIIGASGKAGSRILKEALKRG-HEVTAIVRNASKLAAR----QGVTILQKDIFDLTSLASDLAGHDAVISAFGAGAS   75 (211)
T ss_pred             CeEEEEecCchhHHHHHHHHHhCC-CeeEEEEeChHhcccc----ccceeecccccChhhhHhhhcCCceEEEeccCCCC
Confidence            689999999999999999999999 8999999997654221    344455555                          


Q ss_pred             ----------------------------------------------------------------ccCCCCCceEEEEeCC
Q 017760           66 ----------------------------------------------------------------RKNNRKCLYTCAVRPA   81 (366)
Q Consensus        66 ----------------------------------------------------------------ks~~~~~l~~~ilRp~   81 (366)
                                                                                      .-..+..+++|.+-|+
T Consensus        76 ~~~~~~~k~~~~li~~l~~agv~RllVVGGAGSL~id~g~rLvD~p~fP~ey~~~A~~~ae~L~~Lr~~~~l~WTfvSPa  155 (211)
T COG2910          76 DNDELHSKSIEALIEALKGAGVPRLLVVGGAGSLEIDEGTRLVDTPDFPAEYKPEALAQAEFLDSLRAEKSLDWTFVSPA  155 (211)
T ss_pred             ChhHHHHHHHHHHHHHHhhcCCeeEEEEcCccceEEcCCceeecCCCCchhHHHHHHHHHHHHHHHhhccCcceEEeCcH
Confidence                                                                            0044556999999999


Q ss_pred             ccccCCCCCCHHHHHHHHHcCCCCeeecCCCcceeceeHHHHHHHHHHHHh
Q 017760           82 AIYGPGEERHLPRIVSLAKLGLVPFKIGEPSVKTDWIYVDNLVLALILASM  132 (366)
Q Consensus        82 ~iyGp~~~~~l~~~i~~~~~g~~~~~~g~~~~~~~~v~vdDla~a~~~a~~  132 (366)
                      ..|-||++.-      ..+.|......+.  .--++|...|.|-|++.-++
T Consensus       156 a~f~PGerTg------~yrlggD~ll~n~--~G~SrIS~aDYAiA~lDe~E  198 (211)
T COG2910         156 AFFEPGERTG------NYRLGGDQLLVNA--KGESRISYADYAIAVLDELE  198 (211)
T ss_pred             HhcCCccccC------ceEeccceEEEcC--CCceeeeHHHHHHHHHHHHh
Confidence            9999987521      1122333333332  22378999999999999998

>PRK06128 oxidoreductase; Provisional

Probab=98.39  E-value=3.5e-06  Score=79.30  Aligned_cols=37  Identities=27%  Similarity=0.476  Sum_probs=32.2

Q ss_pred             ccCCeEEEEcCCChhHHHHHHHHHHcCCceEEEEecCC
Q 017760            9 IEGKTFLVTGGLGHVGSALCLELVRRGAYQVRAFDLRT   46 (366)
Q Consensus         9 ~~~~~VlITGgtGfiG~~L~~~L~~~g~~~V~~~dr~~   46 (366)
                      +++++++||||+|+||+++++.|.+.|+ +|++.+++.
T Consensus        53 l~~k~vlITGas~gIG~~~a~~l~~~G~-~V~i~~~~~   89 (300)
T PRK06128         53 LQGRKALITGADSGIGRATAIAFAREGA-DIALNYLPE   89 (300)
T ss_pred             cCCCEEEEecCCCcHHHHHHHHHHHcCC-EEEEEeCCc
Confidence            4468999999999999999999999995 898877654

>PRK08063 enoyl-(acyl carrier protein) reductase; Provisional

Probab=98.36  E-value=2.3e-06  Score=77.92  Aligned_cols=36  Identities=31%  Similarity=0.446  Sum_probs=30.5

Q ss_pred             ccCCeEEEEcCCChhHHHHHHHHHHcCCceEEEE-ecC
Q 017760            9 IEGKTFLVTGGLGHVGSALCLELVRRGAYQVRAF-DLR   45 (366)
Q Consensus         9 ~~~~~VlITGgtGfiG~~L~~~L~~~g~~~V~~~-dr~   45 (366)
                      |++++++||||+|++|+++++.|.++|+ +|++. +|+
T Consensus         2 ~~~~~vlItGa~g~iG~~~a~~l~~~g~-~v~~~~~r~   38 (250)
T PRK08063          2 FSGKVALVTGSSRGIGKAIALRLAEEGY-DIAVNYARS   38 (250)
T ss_pred             CCCCEEEEeCCCchHHHHHHHHHHHCCC-EEEEEcCCC
Confidence            4567999999999999999999999995 78764 444

>PRK06500 short chain dehydrogenase; Provisional

Probab=98.36  E-value=3.7e-06  Score=76.40  Aligned_cols=37  Identities=30%  Similarity=0.477  Sum_probs=33.2

Q ss_pred             ccCCeEEEEcCCChhHHHHHHHHHHcCCceEEEEecCC
Q 017760            9 IEGKTFLVTGGLGHVGSALCLELVRRGAYQVRAFDLRT   46 (366)
Q Consensus         9 ~~~~~VlITGgtGfiG~~L~~~L~~~g~~~V~~~dr~~   46 (366)
                      +++++++||||+|++|++++++|.++|+ +|++++|+.
T Consensus         4 ~~~k~vlItGasg~iG~~la~~l~~~g~-~v~~~~r~~   40 (249)
T PRK06500          4 LQGKTALITGGTSGIGLETARQFLAEGA-RVAITGRDP   40 (249)
T ss_pred             CCCCEEEEeCCCchHHHHHHHHHHHCCC-EEEEecCCH
Confidence            4567999999999999999999999995 899998864

>PRK09730 putative NAD(P)-binding oxidoreductase; Provisional

Probab=98.33  E-value=3e-06  Score=76.87  Aligned_cols=32  Identities=34%  Similarity=0.330  Sum_probs=28.3

Q ss_pred             CCeEEEEcCCChhHHHHHHHHHHcCCceEEEEe
Q 017760           11 GKTFLVTGGLGHVGSALCLELVRRGAYQVRAFD   43 (366)
Q Consensus        11 ~~~VlITGgtGfiG~~L~~~L~~~g~~~V~~~d   43 (366)
                      |++++||||+|++|+++++.|++.|+ +|++..
T Consensus         1 ~~~~lItGa~g~iG~~l~~~l~~~g~-~v~~~~   32 (247)
T PRK09730          1 MAIALVTGGSRGIGRATALLLAQEGY-TVAVNY   32 (247)
T ss_pred             CCEEEEeCCCchHHHHHHHHHHHCCC-EEEEEe
Confidence            46899999999999999999999995 887753

>PRK06523 short chain dehydrogenase; Provisional

Probab=98.32  E-value=7.4e-06  Score=75.12  Aligned_cols=39  Identities=33%  Similarity=0.444  Sum_probs=34.7

Q ss_pred             cccCCeEEEEcCCChhHHHHHHHHHHcCCceEEEEecCCC
Q 017760            8 GIEGKTFLVTGGLGHVGSALCLELVRRGAYQVRAFDLRTN   47 (366)
Q Consensus         8 ~~~~~~VlITGgtGfiG~~L~~~L~~~g~~~V~~~dr~~~   47 (366)
                      .+++++++||||+|.+|+++++.|.++|+ +|++++|+..
T Consensus         6 ~~~~k~vlItGas~gIG~~ia~~l~~~G~-~v~~~~r~~~   44 (260)
T PRK06523          6 ELAGKRALVTGGTKGIGAATVARLLEAGA-RVVTTARSRP   44 (260)
T ss_pred             CCCCCEEEEECCCCchhHHHHHHHHHCCC-EEEEEeCChh
Confidence            35678999999999999999999999995 8999998753

>PRK08213 gluconate 5-dehydrogenase; Provisional

Probab=98.30  E-value=7.1e-06  Score=75.23  Aligned_cols=39  Identities=33%  Similarity=0.415  Sum_probs=34.5

Q ss_pred             cccCCeEEEEcCCChhHHHHHHHHHHcCCceEEEEecCCC
Q 017760            8 GIEGKTFLVTGGLGHVGSALCLELVRRGAYQVRAFDLRTN   47 (366)
Q Consensus         8 ~~~~~~VlITGgtGfiG~~L~~~L~~~g~~~V~~~dr~~~   47 (366)
                      .+++++++||||+|++|+++++.|.+.|+ +|++++++..
T Consensus         9 ~~~~k~ilItGa~g~IG~~la~~l~~~G~-~V~~~~r~~~   47 (259)
T PRK08213          9 DLSGKTALVTGGSRGLGLQIAEALGEAGA-RVVLSARKAE   47 (259)
T ss_pred             CcCCCEEEEECCCchHHHHHHHHHHHcCC-EEEEEeCCHH
Confidence            35678999999999999999999999995 8999988753

>PRK08628 short chain dehydrogenase; Provisional

Probab=98.30  E-value=1.7e-06  Score=79.28  Aligned_cols=39  Identities=31%  Similarity=0.513  Sum_probs=34.6

Q ss_pred             ccCCeEEEEcCCChhHHHHHHHHHHcCCceEEEEecCCCC
Q 017760            9 IEGKTFLVTGGLGHVGSALCLELVRRGAYQVRAFDLRTNS   48 (366)
Q Consensus         9 ~~~~~VlITGgtGfiG~~L~~~L~~~g~~~V~~~dr~~~~   48 (366)
                      +++++++||||+|.+|++++++|+++|+ +|++++++++.
T Consensus         5 l~~~~ilItGasggiG~~la~~l~~~G~-~v~~~~r~~~~   43 (258)
T PRK08628          5 LKDKVVIVTGGASGIGAAISLRLAEEGA-IPVIFGRSAPD   43 (258)
T ss_pred             cCCCEEEEeCCCChHHHHHHHHHHHcCC-cEEEEcCChhh
Confidence            5568999999999999999999999995 89999887653

>PRK05565 fabG 3-ketoacyl-(acyl-carrier-protein) reductase; Provisional

Probab=98.29  E-value=4.7e-06  Score=75.50  Aligned_cols=37  Identities=35%  Similarity=0.546  Sum_probs=32.5

Q ss_pred             ccCCeEEEEcCCChhHHHHHHHHHHcCCceEEEE-ecCC
Q 017760            9 IEGKTFLVTGGLGHVGSALCLELVRRGAYQVRAF-DLRT   46 (366)
Q Consensus         9 ~~~~~VlITGgtGfiG~~L~~~L~~~g~~~V~~~-dr~~   46 (366)
                      +++++++||||+|++|.++++.|+++|+ +|+++ ++++
T Consensus         3 ~~~~~ilI~Gasg~iG~~la~~l~~~g~-~v~~~~~r~~   40 (247)
T PRK05565          3 LMGKVAIVTGASGGIGRAIAELLAKEGA-KVVIAYDINE   40 (247)
T ss_pred             CCCCEEEEeCCCcHHHHHHHHHHHHCCC-EEEEEcCCCH
Confidence            4567999999999999999999999995 89888 7764

>PRK12824 acetoacetyl-CoA reductase; Provisional

Probab=98.26  E-value=5.7e-06  Score=74.91  Aligned_cols=34  Identities=38%  Similarity=0.419  Sum_probs=31.5

Q ss_pred             CeEEEEcCCChhHHHHHHHHHHcCCceEEEEecCC
Q 017760           12 KTFLVTGGLGHVGSALCLELVRRGAYQVRAFDLRT   46 (366)
Q Consensus        12 ~~VlITGgtGfiG~~L~~~L~~~g~~~V~~~dr~~   46 (366)
                      ++++||||+|++|+++++.|.++|+ +|+++++++
T Consensus         3 k~vlItG~s~~iG~~la~~l~~~g~-~vi~~~r~~   36 (245)
T PRK12824          3 KIALVTGAKRGIGSAIARELLNDGY-RVIATYFSG   36 (245)
T ss_pred             CEEEEeCCCchHHHHHHHHHHHcCC-EEEEEeCCc
Confidence            5899999999999999999999995 899999875

>PRK09186 flagellin modification protein A; Provisional

Probab=98.26  E-value=3.8e-06  Score=76.73  Aligned_cols=38  Identities=39%  Similarity=0.609  Sum_probs=33.9

Q ss_pred             ccCCeEEEEcCCChhHHHHHHHHHHcCCceEEEEecCCC
Q 017760            9 IEGKTFLVTGGLGHVGSALCLELVRRGAYQVRAFDLRTN   47 (366)
Q Consensus         9 ~~~~~VlITGgtGfiG~~L~~~L~~~g~~~V~~~dr~~~   47 (366)
                      +++++++||||+|.+|+++++.|.+.|+ +|++++|++.
T Consensus         2 ~~~k~vlItGas~giG~~~a~~l~~~g~-~v~~~~r~~~   39 (256)
T PRK09186          2 LKGKTILITGAGGLIGSALVKAILEAGG-IVIAADIDKE   39 (256)
T ss_pred             CCCCEEEEECCCchHHHHHHHHHHHCCC-EEEEEecChH
Confidence            4568999999999999999999999995 8999988754

>PRK06841 short chain dehydrogenase; Provisional

Probab=98.26  E-value=6.6e-06  Score=75.17  Aligned_cols=38  Identities=32%  Similarity=0.540  Sum_probs=34.1

Q ss_pred             ccCCeEEEEcCCChhHHHHHHHHHHcCCceEEEEecCCC
Q 017760            9 IEGKTFLVTGGLGHVGSALCLELVRRGAYQVRAFDLRTN   47 (366)
Q Consensus         9 ~~~~~VlITGgtGfiG~~L~~~L~~~g~~~V~~~dr~~~   47 (366)
                      +++++++||||+|.+|+++++.|.++|+ +|++++|+..
T Consensus        13 ~~~k~vlItGas~~IG~~la~~l~~~G~-~Vi~~~r~~~   50 (255)
T PRK06841         13 LSGKVAVVTGGASGIGHAIAELFAAKGA-RVALLDRSED   50 (255)
T ss_pred             CCCCEEEEECCCChHHHHHHHHHHHCCC-EEEEEeCCHH
Confidence            4568999999999999999999999995 8999998754

>PRK12743 oxidoreductase; Provisional

Probab=98.25  E-value=9e-06  Score=74.52  Aligned_cols=35  Identities=20%  Similarity=0.200  Sum_probs=31.0

Q ss_pred             CCeEEEEcCCChhHHHHHHHHHHcCCceEEEEecCC
Q 017760           11 GKTFLVTGGLGHVGSALCLELVRRGAYQVRAFDLRT   46 (366)
Q Consensus        11 ~~~VlITGgtGfiG~~L~~~L~~~g~~~V~~~dr~~   46 (366)
                      +++++||||+|.+|.++++.|++.|+ +|+++++++
T Consensus         2 ~k~vlItGas~giG~~~a~~l~~~G~-~V~~~~~~~   36 (256)
T PRK12743          2 AQVAIVTASDSGIGKACALLLAQQGF-DIGITWHSD   36 (256)
T ss_pred             CCEEEEECCCchHHHHHHHHHHHCCC-EEEEEeCCC
Confidence            46899999999999999999999995 898886654

>PRK07326 short chain dehydrogenase; Provisional

Probab=98.25  E-value=5.3e-06  Score=74.87  Aligned_cols=56  Identities=23%  Similarity=0.232  Sum_probs=41.0

Q ss_pred             ccCCeEEEEcCCChhHHHHHHHHHHcCCceEEEEecCCCCccc--cccc-CCCeEEEEcc
Q 017760            9 IEGKTFLVTGGLGHVGSALCLELVRRGAYQVRAFDLRTNSPWS--HLLI-NHGVHCIQGL   65 (366)
Q Consensus         9 ~~~~~VlITGgtGfiG~~L~~~L~~~g~~~V~~~dr~~~~~~~--~~~~-~~~v~~i~gD   65 (366)
                      +++++++||||+|++|++++++|+++|+ +|++++|++.....  ..+. ..+++.+++|
T Consensus         4 ~~~~~ilItGatg~iG~~la~~l~~~g~-~V~~~~r~~~~~~~~~~~l~~~~~~~~~~~D   62 (237)
T PRK07326          4 LKGKVALITGGSKGIGFAIAEALLAEGY-KVAITARDQKELEEAAAELNNKGNVLGLAAD   62 (237)
T ss_pred             CCCCEEEEECCCCcHHHHHHHHHHHCCC-EEEEeeCCHHHHHHHHHHHhccCcEEEEEcc
Confidence            4468899999999999999999999995 89999987532211  1111 1456677777

>PRK06057 short chain dehydrogenase; Provisional

Probab=98.22  E-value=3.4e-06  Score=77.22  Aligned_cols=38  Identities=29%  Similarity=0.438  Sum_probs=34.3

Q ss_pred             ccCCeEEEEcCCChhHHHHHHHHHHcCCceEEEEecCCC
Q 017760            9 IEGKTFLVTGGLGHVGSALCLELVRRGAYQVRAFDLRTN   47 (366)
Q Consensus         9 ~~~~~VlITGgtGfiG~~L~~~L~~~g~~~V~~~dr~~~   47 (366)
                      +++++|+||||+|++|.+++++|.++|+ +|++++|+..
T Consensus         5 ~~~~~vlItGasggIG~~~a~~l~~~G~-~v~~~~r~~~   42 (255)
T PRK06057          5 LAGRVAVITGGGSGIGLATARRLAAEGA-TVVVGDIDPE   42 (255)
T ss_pred             CCCCEEEEECCCchHHHHHHHHHHHcCC-EEEEEeCCHH
Confidence            5678999999999999999999999994 8999998754

>PLN02253 xanthoxin dehydrogenase

Probab=98.21  E-value=3.8e-06  Score=78.04  Aligned_cols=38  Identities=34%  Similarity=0.520  Sum_probs=33.8

Q ss_pred             cccCCeEEEEcCCChhHHHHHHHHHHcCCceEEEEecCC
Q 017760            8 GIEGKTFLVTGGLGHVGSALCLELVRRGAYQVRAFDLRT   46 (366)
Q Consensus         8 ~~~~~~VlITGgtGfiG~~L~~~L~~~g~~~V~~~dr~~   46 (366)
                      .+++++++||||+|.||++++++|.+.|+ +|++++++.
T Consensus        15 ~l~~k~~lItGas~gIG~~la~~l~~~G~-~v~~~~~~~   52 (280)
T PLN02253         15 RLLGKVALVTGGATGIGESIVRLFHKHGA-KVCIVDLQD   52 (280)
T ss_pred             ccCCCEEEEECCCchHHHHHHHHHHHcCC-EEEEEeCCH
Confidence            34568899999999999999999999995 899998864

>TIGR01830 3oxo_ACP_reduc 3-oxoacyl-(acyl-carrier-protein) reductase

Probab=98.21  E-value=7e-06  Score=73.97  Aligned_cols=32  Identities=34%  Similarity=0.445  Sum_probs=29.5

Q ss_pred             EEEEcCCChhHHHHHHHHHHcCCceEEEEecCC
Q 017760           14 FLVTGGLGHVGSALCLELVRRGAYQVRAFDLRT   46 (366)
Q Consensus        14 VlITGgtGfiG~~L~~~L~~~g~~~V~~~dr~~   46 (366)
                      ++|||++|++|+++++.|.++|+ +|++++++.
T Consensus         1 vlItG~~g~iG~~la~~l~~~G~-~v~~~~r~~   32 (239)
T TIGR01830         1 ALVTGASRGIGRAIALKLAKEGA-KVIITYRSS   32 (239)
T ss_pred             CEEECCCcHHHHHHHHHHHHCCC-EEEEEeCCc
Confidence            58999999999999999999995 899998875

This model represents 3-oxoacyl-[ACP] reductase, also called 3-ketoacyl-acyl carrier protein reductase, an enzyme of fatty acid biosynthesis.

>PRK12936 3-ketoacyl-(acyl-carrier-protein) reductase NodG; Reviewed

Probab=98.20  E-value=1.2e-05  Score=72.78  Aligned_cols=37  Identities=32%  Similarity=0.478  Sum_probs=32.3

Q ss_pred             ccCCeEEEEcCCChhHHHHHHHHHHcCCceEEEEecCC
Q 017760            9 IEGKTFLVTGGLGHVGSALCLELVRRGAYQVRAFDLRT   46 (366)
Q Consensus         9 ~~~~~VlITGgtGfiG~~L~~~L~~~g~~~V~~~dr~~   46 (366)
                      +++++++||||+|++|+++++.|.++|+ .|+..+++.
T Consensus         4 ~~~~~vlItGa~g~iG~~la~~l~~~g~-~v~~~~~~~   40 (245)
T PRK12936          4 LSGRKALVTGASGGIGEEIARLLHAQGA-IVGLHGTRV   40 (245)
T ss_pred             CCCCEEEEECCCChHHHHHHHHHHHCCC-EEEEEcCCH
Confidence            4568999999999999999999999995 788877664

>PRK07825 short chain dehydrogenase; Provisional

Probab=98.18  E-value=5.3e-06  Score=76.79  Aligned_cols=38  Identities=34%  Similarity=0.446  Sum_probs=33.6

Q ss_pred             ccCCeEEEEcCCChhHHHHHHHHHHcCCceEEEEecCCC
Q 017760            9 IEGKTFLVTGGLGHVGSALCLELVRRGAYQVRAFDLRTN   47 (366)
Q Consensus         9 ~~~~~VlITGgtGfiG~~L~~~L~~~g~~~V~~~dr~~~   47 (366)
                      +++++++||||+|.+|+++++.|.++|+ +|++.+|++.
T Consensus         3 ~~~~~ilVtGasggiG~~la~~l~~~G~-~v~~~~r~~~   40 (273)
T PRK07825          3 LRGKVVAITGGARGIGLATARALAALGA-RVAIGDLDEA   40 (273)
T ss_pred             CCCCEEEEeCCCchHHHHHHHHHHHCCC-EEEEEECCHH
Confidence            4567999999999999999999999995 8999988653

>PRK12744 short chain dehydrogenase; Provisional

Probab=98.17  E-value=1.8e-05  Score=72.59  Aligned_cols=37  Identities=27%  Similarity=0.580  Sum_probs=31.7

Q ss_pred             ccCCeEEEEcCCChhHHHHHHHHHHcCCceEEEEecCC
Q 017760            9 IEGKTFLVTGGLGHVGSALCLELVRRGAYQVRAFDLRT   46 (366)
Q Consensus         9 ~~~~~VlITGgtGfiG~~L~~~L~~~g~~~V~~~dr~~   46 (366)
                      +++++++||||+|.+|.++++.|++.|+ +|+.++++.
T Consensus         6 l~~k~vlItGa~~gIG~~~a~~l~~~G~-~vv~i~~~~   42 (257)
T PRK12744          6 LKGKVVLIAGGAKNLGGLIARDLAAQGA-KAVAIHYNS   42 (257)
T ss_pred             CCCcEEEEECCCchHHHHHHHHHHHCCC-cEEEEecCC
Confidence            3457999999999999999999999995 777776654

>TIGR01832 kduD 2-deoxy-D-gluconate 3-dehydrogenase

Probab=98.15  E-value=1.9e-05  Score=71.74  Aligned_cols=37  Identities=30%  Similarity=0.447  Sum_probs=33.5

Q ss_pred             ccCCeEEEEcCCChhHHHHHHHHHHcCCceEEEEecCC
Q 017760            9 IEGKTFLVTGGLGHVGSALCLELVRRGAYQVRAFDLRT   46 (366)
Q Consensus         9 ~~~~~VlITGgtGfiG~~L~~~L~~~g~~~V~~~dr~~   46 (366)
                      +++++++||||+|.+|.+++++|.+.|+ +|++++|+.
T Consensus         3 ~~~k~vlItGas~gIG~~ia~~l~~~G~-~vi~~~r~~   39 (248)
T TIGR01832         3 LEGKVALVTGANTGLGQGIAVGLAEAGA-DIVGAGRSE   39 (248)
T ss_pred             CCCCEEEEECCCchHHHHHHHHHHHCCC-EEEEEcCch
Confidence            4568999999999999999999999995 899999865

This model describes 2-deoxy-D-gluconate 3-dehydrogenase (also called 2-keto-3-deoxygluconate oxidoreductase), a member of the family of short-chain-alcohol dehydrogenases (pfam00106). This protein has been characterized in Erwinia chrysanthemi as an enzyme of pectin degradation.

>PRK05717 oxidoreductase; Validated

Probab=98.15  E-value=2e-05  Score=72.12  Aligned_cols=39  Identities=33%  Similarity=0.439  Sum_probs=34.3

Q ss_pred             cccCCeEEEEcCCChhHHHHHHHHHHcCCceEEEEecCCC
Q 017760            8 GIEGKTFLVTGGLGHVGSALCLELVRRGAYQVRAFDLRTN   47 (366)
Q Consensus         8 ~~~~~~VlITGgtGfiG~~L~~~L~~~g~~~V~~~dr~~~   47 (366)
                      ..++++++||||+|++|+++++.|.++|+ +|++++++..
T Consensus         7 ~~~~k~vlItG~sg~IG~~~a~~l~~~g~-~v~~~~~~~~   45 (255)
T PRK05717          7 GHNGRVALVTGAARGIGLGIAAWLIAEGW-QVVLADLDRE   45 (255)
T ss_pred             ccCCCEEEEeCCcchHHHHHHHHHHHcCC-EEEEEcCCHH
Confidence            35578999999999999999999999995 8999987653

>PRK07856 short chain dehydrogenase; Provisional

Probab=98.14  E-value=2.7e-05  Score=71.09  Aligned_cols=39  Identities=28%  Similarity=0.502  Sum_probs=34.7

Q ss_pred             cccCCeEEEEcCCChhHHHHHHHHHHcCCceEEEEecCCC
Q 017760            8 GIEGKTFLVTGGLGHVGSALCLELVRRGAYQVRAFDLRTN   47 (366)
Q Consensus         8 ~~~~~~VlITGgtGfiG~~L~~~L~~~g~~~V~~~dr~~~   47 (366)
                      .+++++++||||+|.+|+++++.|.++|+ +|++++|+..
T Consensus         3 ~~~~k~~lItGas~gIG~~la~~l~~~g~-~v~~~~r~~~   41 (252)
T PRK07856          3 DLTGRVVLVTGGTRGIGAGIARAFLAAGA-TVVVCGRRAP   41 (252)
T ss_pred             CCCCCEEEEeCCCchHHHHHHHHHHHCCC-EEEEEeCChh
Confidence            35678999999999999999999999995 8999998763

>PRK08017 oxidoreductase; Provisional

Probab=98.13  E-value=5.8e-06  Score=75.52  Aligned_cols=35  Identities=37%  Similarity=0.467  Sum_probs=31.7

Q ss_pred             CeEEEEcCCChhHHHHHHHHHHcCCceEEEEecCCC
Q 017760           12 KTFLVTGGLGHVGSALCLELVRRGAYQVRAFDLRTN   47 (366)
Q Consensus        12 ~~VlITGgtGfiG~~L~~~L~~~g~~~V~~~dr~~~   47 (366)
                      ++++||||+|++|.++++.|.++|+ +|++++|+..
T Consensus         3 k~vlVtGasg~IG~~la~~l~~~g~-~v~~~~r~~~   37 (256)
T PRK08017          3 KSVLITGCSSGIGLEAALELKRRGY-RVLAACRKPD   37 (256)
T ss_pred             CEEEEECCCChHHHHHHHHHHHCCC-EEEEEeCCHH
Confidence            5899999999999999999999995 8999988753

>PRK06124 gluconate 5-dehydrogenase; Provisional

Probab=98.11  E-value=2e-05  Score=72.03  Aligned_cols=39  Identities=26%  Similarity=0.330  Sum_probs=34.9

Q ss_pred             cccCCeEEEEcCCChhHHHHHHHHHHcCCceEEEEecCCC
Q 017760            8 GIEGKTFLVTGGLGHVGSALCLELVRRGAYQVRAFDLRTN   47 (366)
Q Consensus         8 ~~~~~~VlITGgtGfiG~~L~~~L~~~g~~~V~~~dr~~~   47 (366)
                      .+++++++||||+|++|+++++.|.+.|+ +|++++|++.
T Consensus         8 ~~~~k~ilItGas~~IG~~la~~l~~~G~-~v~~~~r~~~   46 (256)
T PRK06124          8 SLAGQVALVTGSARGLGFEIARALAGAGA-HVLVNGRNAA   46 (256)
T ss_pred             CCCCCEEEEECCCchHHHHHHHHHHHcCC-eEEEEeCCHH
Confidence            35678999999999999999999999995 8999998753

>PRK06550 fabG 3-ketoacyl-(acyl-carrier-protein) reductase; Provisional

Probab=98.11  E-value=5.6e-05  Score=68.12  Aligned_cols=38  Identities=32%  Similarity=0.426  Sum_probs=33.7

Q ss_pred             ccCCeEEEEcCCChhHHHHHHHHHHcCCceEEEEecCCC
Q 017760            9 IEGKTFLVTGGLGHVGSALCLELVRRGAYQVRAFDLRTN   47 (366)
Q Consensus         9 ~~~~~VlITGgtGfiG~~L~~~L~~~g~~~V~~~dr~~~   47 (366)
                      +++++++||||+|++|+++++.|.++|+ +|+++++++.
T Consensus         3 l~~k~~lVtGas~~iG~~ia~~l~~~G~-~v~~~~r~~~   40 (235)
T PRK06550          3 FMTKTVLITGAASGIGLAQARAFLAQGA-QVYGVDKQDK   40 (235)
T ss_pred             CCCCEEEEcCCCchHHHHHHHHHHHCCC-EEEEEeCCcc
Confidence            4567999999999999999999999995 8999988753

>PRK07577 short chain dehydrogenase; Provisional

Probab=98.10  E-value=4.8e-05  Score=68.42  Aligned_cols=38  Identities=34%  Similarity=0.396  Sum_probs=33.8

Q ss_pred             cCCeEEEEcCCChhHHHHHHHHHHcCCceEEEEecCCCC
Q 017760           10 EGKTFLVTGGLGHVGSALCLELVRRGAYQVRAFDLRTNS   48 (366)
Q Consensus        10 ~~~~VlITGgtGfiG~~L~~~L~~~g~~~V~~~dr~~~~   48 (366)
                      .+++++||||+|++|+++++.|.++| ++|++++|+...
T Consensus         2 ~~k~vlItG~s~~iG~~ia~~l~~~G-~~v~~~~r~~~~   39 (234)
T PRK07577          2 SSRTVLVTGATKGIGLALSLRLANLG-HQVIGIARSAID   39 (234)
T ss_pred             CCCEEEEECCCCcHHHHHHHHHHHCC-CEEEEEeCCccc
Confidence            45789999999999999999999999 489999987644

>PRK07985 oxidoreductase; Provisional

Probab=98.09  E-value=3.9e-05  Score=72.06  Aligned_cols=37  Identities=32%  Similarity=0.463  Sum_probs=32.4

Q ss_pred             ccCCeEEEEcCCChhHHHHHHHHHHcCCceEEEEecCC
Q 017760            9 IEGKTFLVTGGLGHVGSALCLELVRRGAYQVRAFDLRT   46 (366)
Q Consensus         9 ~~~~~VlITGgtGfiG~~L~~~L~~~g~~~V~~~dr~~   46 (366)
                      +++++++||||+|.||+++++.|.++|+ +|++.+++.
T Consensus        47 ~~~k~vlITGas~gIG~aia~~L~~~G~-~Vi~~~~~~   83 (294)
T PRK07985         47 LKDRKALVTGGDSGIGRAAAIAYAREGA-DVAISYLPV   83 (294)
T ss_pred             cCCCEEEEECCCCcHHHHHHHHHHHCCC-EEEEecCCc
Confidence            4557999999999999999999999995 899887654

>PRK06113 7-alpha-hydroxysteroid dehydrogenase; Validated

Probab=98.08  E-value=3.5e-05  Score=70.52  Aligned_cols=46  Identities=26%  Similarity=0.468  Sum_probs=37.8

Q ss_pred             CCccccccccCCeEEEEcCCChhHHHHHHHHHHcCCceEEEEecCCC
Q 017760            1 MHLSENEGIEGKTFLVTGGLGHVGSALCLELVRRGAYQVRAFDLRTN   47 (366)
Q Consensus         1 m~~~~~~~~~~~~VlITGgtGfiG~~L~~~L~~~g~~~V~~~dr~~~   47 (366)
                      |-.+.+..+++++|+||||+|++|.++++.|.++|+ +|++++++..
T Consensus         1 ~~~~~~~~l~~k~vlVtG~s~gIG~~la~~l~~~G~-~vv~~~r~~~   46 (255)
T PRK06113          1 MFNSDNLRLDGKCAIITGAGAGIGKEIAITFATAGA-SVVVSDINAD   46 (255)
T ss_pred             CCCccccCcCCCEEEEECCCchHHHHHHHHHHHCCC-eEEEEeCCHH
Confidence            344444456679999999999999999999999995 8999987653

>PRK12938 acetyacetyl-CoA reductase; Provisional

Probab=98.07  E-value=4.2e-05  Score=69.44  Aligned_cols=34  Identities=32%  Similarity=0.517  Sum_probs=29.7

Q ss_pred             cCCeEEEEcCCChhHHHHHHHHHHcCCceEEEEec
Q 017760           10 EGKTFLVTGGLGHVGSALCLELVRRGAYQVRAFDL   44 (366)
Q Consensus        10 ~~~~VlITGgtGfiG~~L~~~L~~~g~~~V~~~dr   44 (366)
                      ++++++||||+|++|+++++.|.+.|+ +|++...
T Consensus         2 ~~k~~lVtG~s~giG~~~a~~l~~~G~-~vv~~~~   35 (246)
T PRK12938          2 SQRIAYVTGGMGGIGTSICQRLHKDGF-KVVAGCG   35 (246)
T ss_pred             CCCEEEEECCCChHHHHHHHHHHHcCC-EEEEEcC
Confidence            457899999999999999999999995 7887543

>PRK06198 short chain dehydrogenase; Provisional

Probab=98.06  E-value=3.1e-05  Score=70.94  Aligned_cols=37  Identities=32%  Similarity=0.527  Sum_probs=33.2

Q ss_pred             ccCCeEEEEcCCChhHHHHHHHHHHcCCce-EEEEecCC
Q 017760            9 IEGKTFLVTGGLGHVGSALCLELVRRGAYQ-VRAFDLRT   46 (366)
Q Consensus         9 ~~~~~VlITGgtGfiG~~L~~~L~~~g~~~-V~~~dr~~   46 (366)
                      +++++++||||+|.+|+.+++.|.++|+ + |++++|+.
T Consensus         4 ~~~k~vlItGa~g~iG~~la~~l~~~G~-~~V~~~~r~~   41 (260)
T PRK06198          4 LDGKVALVTGGTQGLGAAIARAFAERGA-AGLVICGRNA   41 (260)
T ss_pred             CCCcEEEEeCCCchHHHHHHHHHHHCCC-CeEEEEcCCH
Confidence            4568999999999999999999999996 6 99998875

>PRK05650 short chain dehydrogenase; Provisional

Probab=98.05  E-value=3.6e-05  Score=71.06  Aligned_cols=35  Identities=23%  Similarity=0.445  Sum_probs=31.6

Q ss_pred             CeEEEEcCCChhHHHHHHHHHHcCCceEEEEecCCC
Q 017760           12 KTFLVTGGLGHVGSALCLELVRRGAYQVRAFDLRTN   47 (366)
Q Consensus        12 ~~VlITGgtGfiG~~L~~~L~~~g~~~V~~~dr~~~   47 (366)
                      ++++||||+|.+|.++++.|.++|+ +|++.+|+..
T Consensus         1 ~~vlVtGasggIG~~la~~l~~~g~-~V~~~~r~~~   35 (270)
T PRK05650          1 NRVMITGAASGLGRAIALRWAREGW-RLALADVNEE   35 (270)
T ss_pred             CEEEEecCCChHHHHHHHHHHHCCC-EEEEEeCCHH
Confidence            4799999999999999999999995 8999988754

>PRK05786 fabG 3-ketoacyl-(acyl-carrier-protein) reductase; Provisional

Probab=98.04  E-value=2.2e-05  Score=70.79  Aligned_cols=38  Identities=26%  Similarity=0.323  Sum_probs=33.8

Q ss_pred             ccCCeEEEEcCCChhHHHHHHHHHHcCCceEEEEecCCC
Q 017760            9 IEGKTFLVTGGLGHVGSALCLELVRRGAYQVRAFDLRTN   47 (366)
Q Consensus         9 ~~~~~VlITGgtGfiG~~L~~~L~~~g~~~V~~~dr~~~   47 (366)
                      +++++|+||||+|++|+++++.|.+.|+ +|++++|++.
T Consensus         3 ~~~~~vlItGa~g~iG~~~a~~l~~~G~-~V~~~~r~~~   40 (238)
T PRK05786          3 LKGKKVAIIGVSEGLGYAVAYFALKEGA-QVCINSRNEN   40 (238)
T ss_pred             cCCcEEEEECCCchHHHHHHHHHHHCCC-EEEEEeCCHH
Confidence            3467999999999999999999999995 8999998753

>PRK08226 short chain dehydrogenase; Provisional

Probab=98.03  E-value=4.4e-05  Score=70.06  Aligned_cols=37  Identities=32%  Similarity=0.589  Sum_probs=33.7

Q ss_pred             ccCCeEEEEcCCChhHHHHHHHHHHcCCceEEEEecCC
Q 017760            9 IEGKTFLVTGGLGHVGSALCLELVRRGAYQVRAFDLRT   46 (366)
Q Consensus         9 ~~~~~VlITGgtGfiG~~L~~~L~~~g~~~V~~~dr~~   46 (366)
                      +++++++||||+|++|+++++.|+++|+ +|++++|+.
T Consensus         4 ~~~~~~lItG~s~giG~~la~~l~~~G~-~Vv~~~r~~   40 (263)
T PRK08226          4 LTGKTALITGALQGIGEGIARVFARHGA-NLILLDISP   40 (263)
T ss_pred             CCCCEEEEeCCCChHHHHHHHHHHHCCC-EEEEecCCH
Confidence            4568999999999999999999999995 899998875

>PRK06114 short chain dehydrogenase; Provisional

Probab=98.03  E-value=6.7e-05  Score=68.61  Aligned_cols=39  Identities=36%  Similarity=0.660  Sum_probs=34.8

Q ss_pred             cccCCeEEEEcCCChhHHHHHHHHHHcCCceEEEEecCCC
Q 017760            8 GIEGKTFLVTGGLGHVGSALCLELVRRGAYQVRAFDLRTN   47 (366)
Q Consensus         8 ~~~~~~VlITGgtGfiG~~L~~~L~~~g~~~V~~~dr~~~   47 (366)
                      .+++++++||||+|.+|+++++.|.+.|+ +|++++++.+
T Consensus         5 ~~~~k~~lVtG~s~gIG~~ia~~l~~~G~-~v~~~~r~~~   43 (254)
T PRK06114          5 DLDGQVAFVTGAGSGIGQRIAIGLAQAGA-DVALFDLRTD   43 (254)
T ss_pred             CCCCCEEEEECCCchHHHHHHHHHHHCCC-EEEEEeCCcc
Confidence            35678999999999999999999999995 8999998754

>PRK06181 short chain dehydrogenase; Provisional

Probab=98.02  E-value=2.1e-05  Score=72.29  Aligned_cols=35  Identities=34%  Similarity=0.511  Sum_probs=31.9

Q ss_pred             CCeEEEEcCCChhHHHHHHHHHHcCCceEEEEecCC
Q 017760           11 GKTFLVTGGLGHVGSALCLELVRRGAYQVRAFDLRT   46 (366)
Q Consensus        11 ~~~VlITGgtGfiG~~L~~~L~~~g~~~V~~~dr~~   46 (366)
                      +++++||||+|++|.++++.|++.|+ +|++++|++
T Consensus         1 ~~~vlVtGasg~iG~~la~~l~~~g~-~Vi~~~r~~   35 (263)
T PRK06181          1 GKVVIITGASEGIGRALAVRLARAGA-QLVLAARNE   35 (263)
T ss_pred             CCEEEEecCCcHHHHHHHHHHHHCCC-EEEEEeCCH
Confidence            36899999999999999999999995 899999875

>PRK08642 fabG 3-ketoacyl-(acyl-carrier-protein) reductase; Provisional

Probab=98.00  E-value=5.7e-05  Score=68.76  Aligned_cols=36  Identities=36%  Similarity=0.482  Sum_probs=31.0

Q ss_pred             ccCCeEEEEcCCChhHHHHHHHHHHcCCceEEEEecC
Q 017760            9 IEGKTFLVTGGLGHVGSALCLELVRRGAYQVRAFDLR   45 (366)
Q Consensus         9 ~~~~~VlITGgtGfiG~~L~~~L~~~g~~~V~~~dr~   45 (366)
                      .++++++||||+|++|+++++.|.+.|+ +|+..+++
T Consensus         3 l~~k~ilItGas~gIG~~la~~l~~~G~-~vv~~~~~   38 (253)
T PRK08642          3 ISEQTVLVTGGSRGLGAAIARAFAREGA-RVVVNYHQ   38 (253)
T ss_pred             CCCCEEEEeCCCCcHHHHHHHHHHHCCC-eEEEEcCC
Confidence            3457899999999999999999999995 88876554

>PRK10538 malonic semialdehyde reductase; Provisional

Probab=98.00  E-value=2.4e-05  Score=71.37  Aligned_cols=35  Identities=26%  Similarity=0.391  Sum_probs=31.8

Q ss_pred             CeEEEEcCCChhHHHHHHHHHHcCCceEEEEecCCC
Q 017760           12 KTFLVTGGLGHVGSALCLELVRRGAYQVRAFDLRTN   47 (366)
Q Consensus        12 ~~VlITGgtGfiG~~L~~~L~~~g~~~V~~~dr~~~   47 (366)
                      |+|+||||+|++|.++++.|.+.|+ +|++++|++.
T Consensus         1 ~~vlItGasg~iG~~la~~l~~~G~-~V~~~~r~~~   35 (248)
T PRK10538          1 MIVLVTGATAGFGECITRRFIQQGH-KVIATGRRQE   35 (248)
T ss_pred             CEEEEECCCchHHHHHHHHHHHCCC-EEEEEECCHH
Confidence            5799999999999999999999995 8999998753

>PRK08085 gluconate 5-dehydrogenase; Provisional

Probab=98.00  E-value=3.6e-05  Score=70.33  Aligned_cols=38  Identities=29%  Similarity=0.476  Sum_probs=34.0

Q ss_pred             ccCCeEEEEcCCChhHHHHHHHHHHcCCceEEEEecCCC
Q 017760            9 IEGKTFLVTGGLGHVGSALCLELVRRGAYQVRAFDLRTN   47 (366)
Q Consensus         9 ~~~~~VlITGgtGfiG~~L~~~L~~~g~~~V~~~dr~~~   47 (366)
                      +.+++++||||+|.+|.+++++|.+.|+ +|++.+|+..
T Consensus         7 l~~k~~lItGas~giG~~ia~~L~~~G~-~vvl~~r~~~   44 (254)
T PRK08085          7 LAGKNILITGSAQGIGFLLATGLAEYGA-EIIINDITAE   44 (254)
T ss_pred             CCCCEEEEECCCChHHHHHHHHHHHcCC-EEEEEcCCHH
Confidence            4578999999999999999999999995 8999998753

>PRK12937 short chain dehydrogenase; Provisional

Probab=97.99  E-value=5.3e-05  Score=68.61  Aligned_cols=37  Identities=24%  Similarity=0.307  Sum_probs=32.0

Q ss_pred             ccCCeEEEEcCCChhHHHHHHHHHHcCCceEEEEecCC
Q 017760            9 IEGKTFLVTGGLGHVGSALCLELVRRGAYQVRAFDLRT   46 (366)
Q Consensus         9 ~~~~~VlITGgtGfiG~~L~~~L~~~g~~~V~~~dr~~   46 (366)
                      .++++++||||+|++|+++++.|.++|+ +|+++.++.
T Consensus         3 ~~~~~vlItG~~~~iG~~la~~l~~~g~-~v~~~~~~~   39 (245)
T PRK12937          3 LSNKVAIVTGASRGIGAAIARRLAADGF-AVAVNYAGS   39 (245)
T ss_pred             CCCCEEEEeCCCchHHHHHHHHHHHCCC-EEEEecCCC
Confidence            3568999999999999999999999995 788876654

>TIGR01829 AcAcCoA_reduct acetoacetyl-CoA reductase

Probab=97.98  E-value=4.8e-05  Score=68.71  Aligned_cols=33  Identities=39%  Similarity=0.643  Sum_probs=29.9

Q ss_pred             CeEEEEcCCChhHHHHHHHHHHcCCceEEEEecC
Q 017760           12 KTFLVTGGLGHVGSALCLELVRRGAYQVRAFDLR   45 (366)
Q Consensus        12 ~~VlITGgtGfiG~~L~~~L~~~g~~~V~~~dr~   45 (366)
                      ++++||||+|++|+++++.|+++|+ +|+++.++
T Consensus         1 k~~lItG~sg~iG~~la~~l~~~G~-~v~~~~r~   33 (242)
T TIGR01829         1 RIALVTGGMGGIGTAICQRLAKDGY-RVAANCGP   33 (242)
T ss_pred             CEEEEECCCChHHHHHHHHHHHCCC-EEEEEeCC
Confidence            4789999999999999999999995 89998873

(R)-3-hydroxyacyl-CoA + NADP+ = 3-oxoacyl-CoA + NADPH. Members of this family may act in the biosynthesis of poly-beta-hydroxybutyrate (e.g. Rhizobium meliloti) and related poly-beta-hydroxyalkanoates. Note that the member of this family from Azospirillum brasilense, designated NodG, appears to lack acetoacetyl-CoA reductase activity and to act instead in the production of nodulation factor. This family is downgraded to subfamily for this NodG. Other proteins designated NodG, as from Rhizobium, belong to related but distinct protein families.

>PRK09291 short chain dehydrogenase; Provisional

Probab=97.98  E-value=1.5e-05  Score=72.75  Aligned_cols=35  Identities=34%  Similarity=0.396  Sum_probs=31.7

Q ss_pred             CCeEEEEcCCChhHHHHHHHHHHcCCceEEEEecCC
Q 017760           11 GKTFLVTGGLGHVGSALCLELVRRGAYQVRAFDLRT   46 (366)
Q Consensus        11 ~~~VlITGgtGfiG~~L~~~L~~~g~~~V~~~dr~~   46 (366)
                      +++++||||+|.+|+++++.|++.|+ +|++++|++
T Consensus         2 ~~~vlVtGasg~iG~~ia~~l~~~G~-~v~~~~r~~   36 (257)
T PRK09291          2 SKTILITGAGSGFGREVALRLARKGH-NVIAGVQIA   36 (257)
T ss_pred             CCEEEEeCCCCHHHHHHHHHHHHCCC-EEEEEeCCH
Confidence            46899999999999999999999995 899998864

>PRK08643 acetoin reductase; Validated

Probab=97.98  E-value=2.6e-05  Score=71.31  Aligned_cols=36  Identities=33%  Similarity=0.405  Sum_probs=32.5

Q ss_pred             CCeEEEEcCCChhHHHHHHHHHHcCCceEEEEecCCC
Q 017760           11 GKTFLVTGGLGHVGSALCLELVRRGAYQVRAFDLRTN   47 (366)
Q Consensus        11 ~~~VlITGgtGfiG~~L~~~L~~~g~~~V~~~dr~~~   47 (366)
                      +++++||||+|++|.++++.|.++|+ +|++++|+..
T Consensus         2 ~k~~lItGas~giG~~la~~l~~~G~-~v~~~~r~~~   37 (256)
T PRK08643          2 SKVALVTGAGQGIGFAIAKRLVEDGF-KVAIVDYNEE   37 (256)
T ss_pred             CCEEEEECCCChHHHHHHHHHHHCCC-EEEEEeCCHH
Confidence            46899999999999999999999995 8999998753

>PRK07666 fabG 3-ketoacyl-(acyl-carrier-protein) reductase; Provisional

Probab=97.97  E-value=3.2e-05  Score=69.96  Aligned_cols=38  Identities=26%  Similarity=0.486  Sum_probs=33.8

Q ss_pred             ccCCeEEEEcCCChhHHHHHHHHHHcCCceEEEEecCCC
Q 017760            9 IEGKTFLVTGGLGHVGSALCLELVRRGAYQVRAFDLRTN   47 (366)
Q Consensus         9 ~~~~~VlITGgtGfiG~~L~~~L~~~g~~~V~~~dr~~~   47 (366)
                      +++++++||||+|++|.+++++|+++|. +|++++|++.
T Consensus         5 ~~~~~vlVtG~sg~iG~~l~~~L~~~G~-~Vi~~~r~~~   42 (239)
T PRK07666          5 LQGKNALITGAGRGIGRAVAIALAKEGV-NVGLLARTEE   42 (239)
T ss_pred             CCCCEEEEEcCCchHHHHHHHHHHHCCC-EEEEEeCCHH
Confidence            4457899999999999999999999995 8999998753

>KOG4288 consensus Predicted oxidoreductase [General function prediction only]

Probab=97.92  E-value=2.5e-05  Score=68.87  Aligned_cols=118  Identities=17%  Similarity=0.056  Sum_probs=78.1

Q ss_pred             CCeEEEEcCCChhHHHHHHHHHHcCCceEEEEecCCCCcccccccCCCeEEEEcc-------------------------
Q 017760           11 GKTFLVTGGLGHVGSALCLELVRRGAYQVRAFDLRTNSPWSHLLINHGVHCIQGL-------------------------   65 (366)
Q Consensus        11 ~~~VlITGgtGfiG~~L~~~L~~~g~~~V~~~dr~~~~~~~~~~~~~~v~~i~gD-------------------------   65 (366)
                      ....++.|+.||.|+++|+...+.+ +.|-.+.++..+.. .+--...+..+++|                         
T Consensus        52 ~e~tlvlggnpfsgs~vlk~A~~vv-~svgilsen~~k~~-l~sw~~~vswh~gnsfssn~~k~~l~g~t~v~e~~ggfg  129 (283)
T KOG4288|consen   52 VEWTLVLGGNPFSGSEVLKNATNVV-HSVGILSENENKQT-LSSWPTYVSWHRGNSFSSNPNKLKLSGPTFVYEMMGGFG  129 (283)
T ss_pred             HHHHhhhcCCCcchHHHHHHHHhhc-eeeeEeecccCcch-hhCCCcccchhhccccccCcchhhhcCCcccHHHhcCcc
Confidence            3568999999999999999999999 68999988754221 11112334445555                         


Q ss_pred             -------------------------------------------------------ccCCCCCceEEEEeCCccccCCCC-
Q 017760           66 -------------------------------------------------------RKNNRKCLYTCAVRPAAIYGPGEE-   89 (366)
Q Consensus        66 -------------------------------------------------------ks~~~~~l~~~ilRp~~iyGp~~~-   89 (366)
                                                                             +-....+.+-+++||+.|||.+.- 
T Consensus       130 n~~~m~~ing~ani~a~kaa~~~gv~~fvyISa~d~~~~~~i~rGY~~gKR~AE~Ell~~~~~rgiilRPGFiyg~R~v~  209 (283)
T KOG4288|consen  130 NIILMDRINGTANINAVKAAAKAGVPRFVYISAHDFGLPPLIPRGYIEGKREAEAELLKKFRFRGIILRPGFIYGTRNVG  209 (283)
T ss_pred             chHHHHHhccHhhHHHHHHHHHcCCceEEEEEhhhcCCCCccchhhhccchHHHHHHHHhcCCCceeeccceeecccccC
Confidence                                                                   002334678999999999999542 


Q ss_pred             ---CC---HHHHHHHHHcCC-----CCeeecCCCcceeceeHHHHHHHHHHHHh
Q 017760           90 ---RH---LPRIVSLAKLGL-----VPFKIGEPSVKTDWIYVDNLVLALILASM  132 (366)
Q Consensus        90 ---~~---l~~~i~~~~~g~-----~~~~~g~~~~~~~~v~vdDla~a~~~a~~  132 (366)
                         ..   +...+.++.++.     .+...|  .....++.++++|.+.+.|++
T Consensus       210 g~~~pL~~vg~pl~~~~~~a~k~~~kLp~lg--~l~~ppvnve~VA~aal~ai~  261 (283)
T KOG4288|consen  210 GIKSPLHTVGEPLEMVLKFALKPLNKLPLLG--PLLAPPVNVESVALAALKAIE  261 (283)
T ss_pred             cccccHHhhhhhHHHHHHhhhchhhcCcccc--cccCCCcCHHHHHHHHHHhcc
Confidence               11   112222222222     123343  366889999999999999997

>TIGR02632 RhaD_aldol-ADH rhamnulose-1-phosphate aldolase/alcohol dehydrogenase

Probab=97.91  E-value=4.9e-05  Score=79.52  Aligned_cols=38  Identities=32%  Similarity=0.482  Sum_probs=34.0

Q ss_pred             ccCCeEEEEcCCChhHHHHHHHHHHcCCceEEEEecCCC
Q 017760            9 IEGKTFLVTGGLGHVGSALCLELVRRGAYQVRAFDLRTN   47 (366)
Q Consensus         9 ~~~~~VlITGgtGfiG~~L~~~L~~~g~~~V~~~dr~~~   47 (366)
                      +++++++||||+|+||+++++.|.++|+ +|++++++..
T Consensus       412 l~gkvvLVTGasggIG~aiA~~La~~Ga-~Vvi~~r~~~  449 (676)
T TIGR02632       412 LARRVAFVTGGAGGIGRETARRLAAEGA-HVVLADLNLE  449 (676)
T ss_pred             CCCCEEEEeCCCcHHHHHHHHHHHhCCC-EEEEEeCCHH
Confidence            4568999999999999999999999995 8999998753

>PRK06935 2-deoxy-D-gluconate 3-dehydrogenase; Provisional

Probab=97.90  E-value=0.00011  Score=67.35  Aligned_cols=56  Identities=25%  Similarity=0.302  Sum_probs=41.2

Q ss_pred             ccCCeEEEEcCCChhHHHHHHHHHHcCCceEEEEecCCCCccccc-c--cCCCeEEEEcc
Q 017760            9 IEGKTFLVTGGLGHVGSALCLELVRRGAYQVRAFDLRTNSPWSHL-L--INHGVHCIQGL   65 (366)
Q Consensus         9 ~~~~~VlITGgtGfiG~~L~~~L~~~g~~~V~~~dr~~~~~~~~~-~--~~~~v~~i~gD   65 (366)
                      +++++++||||+|.+|.++++.|.+.|+ +|++++++........ .  ...++.++++|
T Consensus        13 l~~k~vlItGas~gIG~~ia~~l~~~G~-~v~~~~~~~~~~~~~~~~~~~~~~~~~~~~D   71 (258)
T PRK06935         13 LDGKVAIVTGGNTGLGQGYAVALAKAGA-DIIITTHGTNWDETRRLIEKEGRKVTFVQVD   71 (258)
T ss_pred             CCCCEEEEeCCCchHHHHHHHHHHHCCC-EEEEEeCCcHHHHHHHHHHhcCCceEEEEcC
Confidence            4568999999999999999999999995 8999988732111111 1  12356777777

>PRK08589 short chain dehydrogenase; Validated

Probab=97.89  E-value=4.4e-05  Score=70.68  Aligned_cols=36  Identities=33%  Similarity=0.510  Sum_probs=33.3

Q ss_pred             ccCCeEEEEcCCChhHHHHHHHHHHcCCceEEEEecC
Q 017760            9 IEGKTFLVTGGLGHVGSALCLELVRRGAYQVRAFDLR   45 (366)
Q Consensus         9 ~~~~~VlITGgtGfiG~~L~~~L~~~g~~~V~~~dr~   45 (366)
                      +++++++||||+|.+|.++++.|+++|+ +|++++|+
T Consensus         4 l~~k~vlItGas~gIG~aia~~l~~~G~-~vi~~~r~   39 (272)
T PRK08589          4 LENKVAVITGASTGIGQASAIALAQEGA-YVLAVDIA   39 (272)
T ss_pred             CCCCEEEEECCCchHHHHHHHHHHHCCC-EEEEEeCc
Confidence            5678999999999999999999999995 89999987

>PRK07063 short chain dehydrogenase; Provisional

Probab=97.87  E-value=7.5e-05  Score=68.47  Aligned_cols=38  Identities=37%  Similarity=0.545  Sum_probs=34.1

Q ss_pred             ccCCeEEEEcCCChhHHHHHHHHHHcCCceEEEEecCCC
Q 017760            9 IEGKTFLVTGGLGHVGSALCLELVRRGAYQVRAFDLRTN   47 (366)
Q Consensus         9 ~~~~~VlITGgtGfiG~~L~~~L~~~g~~~V~~~dr~~~   47 (366)
                      +++++++||||+|.+|.++++.|.++|+ +|++++|+++
T Consensus         5 l~~k~vlVtGas~gIG~~~a~~l~~~G~-~vv~~~r~~~   42 (260)
T PRK07063          5 LAGKVALVTGAAQGIGAAIARAFAREGA-AVALADLDAA   42 (260)
T ss_pred             cCCCEEEEECCCchHHHHHHHHHHHCCC-EEEEEeCCHH
Confidence            4568999999999999999999999995 8999998754

>PRK06172 short chain dehydrogenase; Provisional

Probab=97.84  E-value=0.00012  Score=66.65  Aligned_cols=38  Identities=39%  Similarity=0.564  Sum_probs=34.1

Q ss_pred             ccCCeEEEEcCCChhHHHHHHHHHHcCCceEEEEecCCC
Q 017760            9 IEGKTFLVTGGLGHVGSALCLELVRRGAYQVRAFDLRTN   47 (366)
Q Consensus         9 ~~~~~VlITGgtGfiG~~L~~~L~~~g~~~V~~~dr~~~   47 (366)
                      +++++++||||+|.+|+++++.|.+.|+ +|++++|++.
T Consensus         5 l~~k~ilItGas~~iG~~ia~~l~~~G~-~v~~~~r~~~   42 (253)
T PRK06172          5 FSGKVALVTGGAAGIGRATALAFAREGA-KVVVADRDAA   42 (253)
T ss_pred             CCCCEEEEeCCCchHHHHHHHHHHHcCC-EEEEEeCCHH
Confidence            4568999999999999999999999995 8999998753

>PRK09242 tropinone reductase; Provisional

Probab=97.83  E-value=0.00014  Score=66.54  Aligned_cols=37  Identities=30%  Similarity=0.446  Sum_probs=33.7

Q ss_pred             ccCCeEEEEcCCChhHHHHHHHHHHcCCceEEEEecCC
Q 017760            9 IEGKTFLVTGGLGHVGSALCLELVRRGAYQVRAFDLRT   46 (366)
Q Consensus         9 ~~~~~VlITGgtGfiG~~L~~~L~~~g~~~V~~~dr~~   46 (366)
                      +++++++||||+|.+|+++++.|.+.|+ +|++++|+.
T Consensus         7 ~~~k~~lItGa~~gIG~~~a~~l~~~G~-~v~~~~r~~   43 (257)
T PRK09242          7 LDGQTALITGASKGIGLAIAREFLGLGA-DVLIVARDA   43 (257)
T ss_pred             cCCCEEEEeCCCchHHHHHHHHHHHcCC-EEEEEeCCH
Confidence            4678999999999999999999999995 899999875

>PRK07097 gluconate 5-dehydrogenase; Provisional

Probab=97.82  E-value=0.00014  Score=67.02  Aligned_cols=38  Identities=26%  Similarity=0.406  Sum_probs=33.7

Q ss_pred             ccCCeEEEEcCCChhHHHHHHHHHHcCCceEEEEecCCC
Q 017760            9 IEGKTFLVTGGLGHVGSALCLELVRRGAYQVRAFDLRTN   47 (366)
Q Consensus         9 ~~~~~VlITGgtGfiG~~L~~~L~~~g~~~V~~~dr~~~   47 (366)
                      +++++++||||+|.+|.+++++|+++|+ +|+++++++.
T Consensus         8 ~~~k~~lItGa~~~iG~~ia~~l~~~G~-~vv~~~~~~~   45 (265)
T PRK07097          8 LKGKIALITGASYGIGFAIAKAYAKAGA-TIVFNDINQE   45 (265)
T ss_pred             CCCCEEEEeCCCchHHHHHHHHHHHCCC-eEEEEeCCHH
Confidence            4568999999999999999999999995 8999987753

>PRK08339 short chain dehydrogenase; Provisional

Probab=97.82  E-value=6.6e-05  Score=69.22  Aligned_cols=38  Identities=24%  Similarity=0.308  Sum_probs=34.0

Q ss_pred             ccCCeEEEEcCCChhHHHHHHHHHHcCCceEEEEecCCC
Q 017760            9 IEGKTFLVTGGLGHVGSALCLELVRRGAYQVRAFDLRTN   47 (366)
Q Consensus         9 ~~~~~VlITGgtGfiG~~L~~~L~~~g~~~V~~~dr~~~   47 (366)
                      +++++++||||+|.+|.++++.|.+.|+ +|++.+|+..
T Consensus         6 l~~k~~lItGas~gIG~aia~~l~~~G~-~V~~~~r~~~   43 (263)
T PRK08339          6 LSGKLAFTTASSKGIGFGVARVLARAGA-DVILLSRNEE   43 (263)
T ss_pred             CCCCEEEEeCCCCcHHHHHHHHHHHCCC-EEEEEeCCHH
Confidence            4568999999999999999999999995 8999998753

>PRK06463 fabG 3-ketoacyl-(acyl-carrier-protein) reductase; Provisional

Probab=97.81  E-value=0.00022  Score=65.22  Aligned_cols=37  Identities=32%  Similarity=0.542  Sum_probs=32.4

Q ss_pred             ccCCeEEEEcCCChhHHHHHHHHHHcCCceEEEEecCC
Q 017760            9 IEGKTFLVTGGLGHVGSALCLELVRRGAYQVRAFDLRT   46 (366)
Q Consensus         9 ~~~~~VlITGgtGfiG~~L~~~L~~~g~~~V~~~dr~~   46 (366)
                      +++++++||||+|.+|.++++.|.++|+ +|++.+++.
T Consensus         5 l~~k~~lItGas~gIG~~~a~~l~~~G~-~v~~~~~~~   41 (255)
T PRK06463          5 FKGKVALITGGTRGIGRAIAEAFLREGA-KVAVLYNSA   41 (255)
T ss_pred             cCCCEEEEeCCCChHHHHHHHHHHHCCC-EEEEEeCCc
Confidence            4568999999999999999999999995 898876654

>PRK08264 short chain dehydrogenase; Validated

Probab=97.77  E-value=4.8e-05  Score=68.66  Aligned_cols=54  Identities=33%  Similarity=0.319  Sum_probs=43.2

Q ss_pred             ccCCeEEEEcCCChhHHHHHHHHHHcCCceEEEEecCCCCcccccccCCCeEEEEcc
Q 017760            9 IEGKTFLVTGGLGHVGSALCLELVRRGAYQVRAFDLRTNSPWSHLLINHGVHCIQGL   65 (366)
Q Consensus         9 ~~~~~VlITGgtGfiG~~L~~~L~~~g~~~V~~~dr~~~~~~~~~~~~~~v~~i~gD   65 (366)
                      +.+++++||||+|++|+++++.|+++|.++|++++|+......   ...++.++++|
T Consensus         4 ~~~~~vlItGgsg~iG~~la~~l~~~G~~~V~~~~r~~~~~~~---~~~~~~~~~~D   57 (238)
T PRK08264          4 IKGKVVLVTGANRGIGRAFVEQLLARGAAKVYAAARDPESVTD---LGPRVVPLQLD   57 (238)
T ss_pred             CCCCEEEEECCCchHHHHHHHHHHHCCcccEEEEecChhhhhh---cCCceEEEEec
Confidence            4567999999999999999999999994389999987643221   33567888888

>PRK06179 short chain dehydrogenase; Provisional

Probab=97.77  E-value=4.8e-05  Score=70.17  Aligned_cols=52  Identities=25%  Similarity=0.193  Sum_probs=42.2

Q ss_pred             ccCCeEEEEcCCChhHHHHHHHHHHcCCceEEEEecCCCCcccccccCCCeEEEEcc
Q 017760            9 IEGKTFLVTGGLGHVGSALCLELVRRGAYQVRAFDLRTNSPWSHLLINHGVHCIQGL   65 (366)
Q Consensus         9 ~~~~~VlITGgtGfiG~~L~~~L~~~g~~~V~~~dr~~~~~~~~~~~~~~v~~i~gD   65 (366)
                      +++++++||||+|++|++++++|.++|+ +|++++|++....    ...+++++++|
T Consensus         2 ~~~~~vlVtGasg~iG~~~a~~l~~~g~-~V~~~~r~~~~~~----~~~~~~~~~~D   53 (270)
T PRK06179          2 SNSKVALVTGASSGIGRATAEKLARAGY-RVFGTSRNPARAA----PIPGVELLELD   53 (270)
T ss_pred             CCCCEEEEecCCCHHHHHHHHHHHHCCC-EEEEEeCChhhcc----ccCCCeeEEee
Confidence            3457899999999999999999999995 8999998754321    12467888888

>PRK07069 short chain dehydrogenase; Validated

Probab=97.74  E-value=0.00017  Score=65.50  Aligned_cols=32  Identities=28%  Similarity=0.503  Sum_probs=29.9

Q ss_pred             eEEEEcCCChhHHHHHHHHHHcCCceEEEEecC
Q 017760           13 TFLVTGGLGHVGSALCLELVRRGAYQVRAFDLR   45 (366)
Q Consensus        13 ~VlITGgtGfiG~~L~~~L~~~g~~~V~~~dr~   45 (366)
                      +++||||+|++|.++++.|.++|+ +|++++++
T Consensus         1 ~ilVtG~~~~iG~~~a~~l~~~G~-~v~~~~r~   32 (251)
T PRK07069          1 RAFITGAAGGLGRAIARRMAEQGA-KVFLTDIN   32 (251)
T ss_pred             CEEEECCCChHHHHHHHHHHHCCC-EEEEEeCC
Confidence            489999999999999999999995 89999987

>PRK07023 short chain dehydrogenase; Provisional

Probab=97.74  E-value=5.2e-05  Score=68.80  Aligned_cols=53  Identities=17%  Similarity=0.149  Sum_probs=40.9

Q ss_pred             CCeEEEEcCCChhHHHHHHHHHHcCCceEEEEecCCCCcccccccCCCeEEEEcc
Q 017760           11 GKTFLVTGGLGHVGSALCLELVRRGAYQVRAFDLRTNSPWSHLLINHGVHCIQGL   65 (366)
Q Consensus        11 ~~~VlITGgtGfiG~~L~~~L~~~g~~~V~~~dr~~~~~~~~~~~~~~v~~i~gD   65 (366)
                      ||+++||||+|++|+++++.|.++|+ +|++++|+..... ......++.++++|
T Consensus         1 ~~~vlItGasggiG~~ia~~l~~~G~-~v~~~~r~~~~~~-~~~~~~~~~~~~~D   53 (243)
T PRK07023          1 AVRAIVTGHSRGLGAALAEQLLQPGI-AVLGVARSRHPSL-AAAAGERLAEVELD   53 (243)
T ss_pred             CceEEEecCCcchHHHHHHHHHhCCC-EEEEEecCcchhh-hhccCCeEEEEEec
Confidence            46899999999999999999999995 8999998764321 11123457777888

>PF13950 Epimerase_Csub: UDP-glucose 4-epimerase C-term subunit; PDB: 1EK5_A 1I3K_B 1I3M_B 1HZJ_A 1EK6_A 1I3N_A 1I3L_A 2CNB_B 1GY8_D 1NAI_A

Probab=97.74  E-value=3.2e-05  Score=54.76  Aligned_cols=36  Identities=17%  Similarity=0.227  Sum_probs=26.7

Q ss_pred             eecHHHHHHhcCCCCCCChHHHHHHHHHHHHhcccc
Q 017760          228 YFSLLKAKDELCYVPIVSPREGMAATISYWQDRKRK  263 (366)
Q Consensus       228 ~~d~~ka~~~LG~~p~~~~~e~l~~~v~~~~~~~~~  263 (366)
                      +.|++||+++|||+|+++++++++++.+|++++..+
T Consensus        26 ~Ad~~kA~~~LgW~p~~~L~~~i~~~w~W~~~np~G   61 (62)
T PF13950_consen   26 VADISKAREELGWKPKYSLEDMIRDAWNWQKKNPNG   61 (62)
T ss_dssp             -B--HHHHHHC----SSSHHHHHHHHHHHHHHSTTT
T ss_pred             hCCHHHHHHHhCCCcCCCHHHHHHHHHHHHHHCcCC
Confidence            679999999999999999999999999999987653

...

>PRK07109 short chain dehydrogenase; Provisional

Probab=97.72  E-value=0.00018  Score=68.92  Aligned_cols=38  Identities=29%  Similarity=0.405  Sum_probs=33.8

Q ss_pred             ccCCeEEEEcCCChhHHHHHHHHHHcCCceEEEEecCCC
Q 017760            9 IEGKTFLVTGGLGHVGSALCLELVRRGAYQVRAFDLRTN   47 (366)
Q Consensus         9 ~~~~~VlITGgtGfiG~~L~~~L~~~g~~~V~~~dr~~~   47 (366)
                      +++++|+||||+|.+|.++++.|.++|+ +|++++|+..
T Consensus         6 l~~k~vlITGas~gIG~~la~~la~~G~-~Vvl~~R~~~   43 (334)
T PRK07109          6 IGRQVVVITGASAGVGRATARAFARRGA-KVVLLARGEE   43 (334)
T ss_pred             CCCCEEEEECCCCHHHHHHHHHHHHCCC-EEEEEECCHH
Confidence            4568999999999999999999999995 8999998753

>PRK07831 short chain dehydrogenase; Provisional

Probab=97.71  E-value=0.00035  Score=64.09  Aligned_cols=38  Identities=34%  Similarity=0.503  Sum_probs=33.0

Q ss_pred             ccCCeEEEEcCCC-hhHHHHHHHHHHcCCceEEEEecCCC
Q 017760            9 IEGKTFLVTGGLG-HVGSALCLELVRRGAYQVRAFDLRTN   47 (366)
Q Consensus         9 ~~~~~VlITGgtG-fiG~~L~~~L~~~g~~~V~~~dr~~~   47 (366)
                      +++++++||||+| -+|+++++.|.++|+ +|++.+++..
T Consensus        15 ~~~k~vlItG~sg~gIG~~ia~~l~~~G~-~V~~~~~~~~   53 (262)
T PRK07831         15 LAGKVVLVTAAAGTGIGSATARRALEEGA-RVVISDIHER   53 (262)
T ss_pred             cCCCEEEEECCCcccHHHHHHHHHHHcCC-EEEEEeCCHH
Confidence            4568999999998 599999999999995 8999987653

>PRK07677 short chain dehydrogenase; Provisional

Probab=97.70  E-value=0.0004  Score=63.36  Aligned_cols=36  Identities=25%  Similarity=0.399  Sum_probs=32.5

Q ss_pred             CCeEEEEcCCChhHHHHHHHHHHcCCceEEEEecCCC
Q 017760           11 GKTFLVTGGLGHVGSALCLELVRRGAYQVRAFDLRTN   47 (366)
Q Consensus        11 ~~~VlITGgtGfiG~~L~~~L~~~g~~~V~~~dr~~~   47 (366)
                      +++++||||+|.+|+++++.|.++|+ +|++++|+..
T Consensus         1 ~k~~lItG~s~giG~~ia~~l~~~G~-~Vi~~~r~~~   36 (252)
T PRK07677          1 EKVVIITGGSSGMGKAMAKRFAEEGA-NVVITGRTKE   36 (252)
T ss_pred             CCEEEEeCCCChHHHHHHHHHHHCCC-EEEEEeCCHH
Confidence            36899999999999999999999995 8999998753

>PRK12748 3-ketoacyl-(acyl-carrier-protein) reductase; Provisional

Probab=97.68  E-value=0.00042  Score=63.38  Aligned_cols=36  Identities=28%  Similarity=0.388  Sum_probs=32.0

Q ss_pred             ccCCeEEEEcCCC--hhHHHHHHHHHHcCCceEEEEecC
Q 017760            9 IEGKTFLVTGGLG--HVGSALCLELVRRGAYQVRAFDLR   45 (366)
Q Consensus         9 ~~~~~VlITGgtG--fiG~~L~~~L~~~g~~~V~~~dr~   45 (366)
                      +++++|+||||+|  .+|.++++.|.++|+ +|++++|+
T Consensus         3 l~~k~vlItGas~~~giG~~la~~l~~~G~-~vi~~~r~   40 (256)
T PRK12748          3 LMKKIALVTGASRLNGIGAAVCRRLAAKGI-DIFFTYWS   40 (256)
T ss_pred             CCCcEEEEeCCCCCCCHHHHHHHHHHHcCC-cEEEEcCC
Confidence            3567899999996  699999999999995 89999887

>PRK07041 short chain dehydrogenase; Provisional

Probab=97.67  E-value=0.00013  Score=65.57  Aligned_cols=50  Identities=24%  Similarity=0.191  Sum_probs=36.2

Q ss_pred             EEEcCCChhHHHHHHHHHHcCCceEEEEecCCCCccc--ccc-cCCCeEEEEcc
Q 017760           15 LVTGGLGHVGSALCLELVRRGAYQVRAFDLRTNSPWS--HLL-INHGVHCIQGL   65 (366)
Q Consensus        15 lITGgtGfiG~~L~~~L~~~g~~~V~~~dr~~~~~~~--~~~-~~~~v~~i~gD   65 (366)
                      +||||+|++|++++++|+++|+ +|++++|++.....  ... ...+++++.+|
T Consensus         1 lItGas~~iG~~~a~~l~~~G~-~v~~~~r~~~~~~~~~~~~~~~~~~~~~~~D   53 (230)
T PRK07041          1 LVVGGSSGIGLALARAFAAEGA-RVTIASRSRDRLAAAARALGGGAPVRTAALD   53 (230)
T ss_pred             CeecCCChHHHHHHHHHHHCCC-EEEEEeCCHHHHHHHHHHHhcCCceEEEEcc
Confidence            5999999999999999999995 89999987432111  001 02356677777

>PRK06101 short chain dehydrogenase; Provisional

Probab=97.64  E-value=4.5e-05  Score=69.21  Aligned_cols=54  Identities=19%  Similarity=0.158  Sum_probs=40.5

Q ss_pred             CCeEEEEcCCChhHHHHHHHHHHcCCceEEEEecCCCCcccccccCCCeEEEEcc
Q 017760           11 GKTFLVTGGLGHVGSALCLELVRRGAYQVRAFDLRTNSPWSHLLINHGVHCIQGL   65 (366)
Q Consensus        11 ~~~VlITGgtGfiG~~L~~~L~~~g~~~V~~~dr~~~~~~~~~~~~~~v~~i~gD   65 (366)
                      |++++||||+|++|.++++.|.++|+ +|++++|++...........++.++++|
T Consensus         1 ~~~vlItGas~giG~~la~~L~~~G~-~V~~~~r~~~~~~~~~~~~~~~~~~~~D   54 (240)
T PRK06101          1 MTAVLITGATSGIGKQLALDYAKQGW-QVIACGRNQSVLDELHTQSANIFTLAFD   54 (240)
T ss_pred             CcEEEEEcCCcHHHHHHHHHHHhCCC-EEEEEECCHHHHHHHHHhcCCCeEEEee
Confidence            46899999999999999999999995 8999998753221111112357788888

>PRK07102 short chain dehydrogenase; Provisional

Probab=97.64  E-value=4.5e-05  Score=69.19  Aligned_cols=54  Identities=13%  Similarity=-0.024  Sum_probs=41.5

Q ss_pred             CCeEEEEcCCChhHHHHHHHHHHcCCceEEEEecCCCCccc--cc---ccCCCeEEEEcc
Q 017760           11 GKTFLVTGGLGHVGSALCLELVRRGAYQVRAFDLRTNSPWS--HL---LINHGVHCIQGL   65 (366)
Q Consensus        11 ~~~VlITGgtGfiG~~L~~~L~~~g~~~V~~~dr~~~~~~~--~~---~~~~~v~~i~gD   65 (366)
                      |++++||||+|++|.++++.|+++|+ +|++++|+++....  ..   ....+++++++|
T Consensus         1 ~~~vlItGas~giG~~~a~~l~~~G~-~Vi~~~r~~~~~~~~~~~~~~~~~~~~~~~~~D   59 (243)
T PRK07102          1 MKKILIIGATSDIARACARRYAAAGA-RLYLAARDVERLERLADDLRARGAVAVSTHELD   59 (243)
T ss_pred             CcEEEEEcCCcHHHHHHHHHHHhcCC-EEEEEeCCHHHHHHHHHHHHHhcCCeEEEEecC
Confidence            47899999999999999999999995 89999998643211  11   012467888888

>PRK05993 short chain dehydrogenase; Provisional

Probab=97.61  E-value=6.8e-05  Score=69.66  Aligned_cols=52  Identities=21%  Similarity=0.183  Sum_probs=41.6

Q ss_pred             CCeEEEEcCCChhHHHHHHHHHHcCCceEEEEecCCCCcccccccCCCeEEEEcc
Q 017760           11 GKTFLVTGGLGHVGSALCLELVRRGAYQVRAFDLRTNSPWSHLLINHGVHCIQGL   65 (366)
Q Consensus        11 ~~~VlITGgtGfiG~~L~~~L~~~g~~~V~~~dr~~~~~~~~~~~~~~v~~i~gD   65 (366)
                      +++|+||||+|++|+++++.|.++|+ +|++++|++...  ..+...+++++.+|
T Consensus         4 ~k~vlItGasggiG~~la~~l~~~G~-~Vi~~~r~~~~~--~~l~~~~~~~~~~D   55 (277)
T PRK05993          4 KRSILITGCSSGIGAYCARALQSDGW-RVFATCRKEEDV--AALEAEGLEAFQLD   55 (277)
T ss_pred             CCEEEEeCCCcHHHHHHHHHHHHCCC-EEEEEECCHHHH--HHHHHCCceEEEcc
Confidence            46899999999999999999999995 899999875432  22233467788888

>PRK06398 aldose dehydrogenase; Validated

Probab=97.61  E-value=0.00015  Score=66.65  Aligned_cols=49  Identities=29%  Similarity=0.417  Sum_probs=41.4

Q ss_pred             ccCCeEEEEcCCChhHHHHHHHHHHcCCceEEEEecCCCCcccccccCCCeEEEEcc
Q 017760            9 IEGKTFLVTGGLGHVGSALCLELVRRGAYQVRAFDLRTNSPWSHLLINHGVHCIQGL   65 (366)
Q Consensus         9 ~~~~~VlITGgtGfiG~~L~~~L~~~g~~~V~~~dr~~~~~~~~~~~~~~v~~i~gD   65 (366)
                      +++++++||||+|.+|.++++.|.+.|+ +|++++|+....       ..++++++|
T Consensus         4 l~gk~vlItGas~gIG~~ia~~l~~~G~-~Vi~~~r~~~~~-------~~~~~~~~D   52 (258)
T PRK06398          4 LKDKVAIVTGGSQGIGKAVVNRLKEEGS-NVINFDIKEPSY-------NDVDYFKVD   52 (258)
T ss_pred             CCCCEEEEECCCchHHHHHHHHHHHCCC-eEEEEeCCcccc-------CceEEEEcc
Confidence            5668999999999999999999999995 899999876432       257788888

>PRK08267 short chain dehydrogenase; Provisional

Probab=97.61  E-value=6.9e-05  Score=68.71  Aligned_cols=54  Identities=20%  Similarity=0.166  Sum_probs=41.4

Q ss_pred             CCeEEEEcCCChhHHHHHHHHHHcCCceEEEEecCCCCccc--ccccCCCeEEEEcc
Q 017760           11 GKTFLVTGGLGHVGSALCLELVRRGAYQVRAFDLRTNSPWS--HLLINHGVHCIQGL   65 (366)
Q Consensus        11 ~~~VlITGgtGfiG~~L~~~L~~~g~~~V~~~dr~~~~~~~--~~~~~~~v~~i~gD   65 (366)
                      |++++||||+|++|+++++.|+++|+ +|++++|+.+....  .......++++++|
T Consensus         1 mk~vlItGasg~iG~~la~~l~~~G~-~V~~~~r~~~~~~~~~~~~~~~~~~~~~~D   56 (260)
T PRK08267          1 MKSIFITGAASGIGRATALLFAAEGW-RVGAYDINEAGLAALAAELGAGNAWTGALD   56 (260)
T ss_pred             CcEEEEeCCCchHHHHHHHHHHHCCC-eEEEEeCCHHHHHHHHHHhcCCceEEEEec
Confidence            47899999999999999999999995 89999987643211  11112467888888

>PRK06139 short chain dehydrogenase; Provisional

Probab=97.60  E-value=0.00028  Score=67.43  Aligned_cols=38  Identities=24%  Similarity=0.404  Sum_probs=33.9

Q ss_pred             ccCCeEEEEcCCChhHHHHHHHHHHcCCceEEEEecCCC
Q 017760            9 IEGKTFLVTGGLGHVGSALCLELVRRGAYQVRAFDLRTN   47 (366)
Q Consensus         9 ~~~~~VlITGgtGfiG~~L~~~L~~~g~~~V~~~dr~~~   47 (366)
                      +++++++||||+|.+|+++++.|.++|+ +|++++|+..
T Consensus         5 l~~k~vlITGAs~GIG~aia~~la~~G~-~Vvl~~R~~~   42 (330)
T PRK06139          5 LHGAVVVITGASSGIGQATAEAFARRGA-RLVLAARDEE   42 (330)
T ss_pred             CCCCEEEEcCCCCHHHHHHHHHHHHCCC-EEEEEECCHH
Confidence            4568999999999999999999999995 8999998753

>KOG1203 consensus Predicted dehydrogenase [Carbohydrate transport and metabolism]

Probab=97.59  E-value=0.00033  Score=67.82  Aligned_cols=42  Identities=33%  Similarity=0.523  Sum_probs=36.3

Q ss_pred             cccccCCeEEEEcCCChhHHHHHHHHHHcCCceEEEEecCCCC
Q 017760            6 NEGIEGKTFLVTGGLGHVGSALCLELVRRGAYQVRAFDLRTNS   48 (366)
Q Consensus         6 ~~~~~~~~VlITGgtGfiG~~L~~~L~~~g~~~V~~~dr~~~~   48 (366)
                      +.++++.+|+|+||||.+|+.+++.|+++| +.|+++.|+...
T Consensus        74 ~~~~~~~~VlVvGatG~vG~~iv~~llkrg-f~vra~VRd~~~  115 (411)
T KOG1203|consen   74 NNSKKPTTVLVVGATGKVGRRIVKILLKRG-FSVRALVRDEQK  115 (411)
T ss_pred             CCCCCCCeEEEecCCCchhHHHHHHHHHCC-CeeeeeccChhh
Confidence            345667899999999999999999999999 589999887543

>PRK08265 short chain dehydrogenase; Provisional

Probab=97.56  E-value=0.0001  Score=67.81  Aligned_cols=56  Identities=27%  Similarity=0.382  Sum_probs=43.0

Q ss_pred             ccCCeEEEEcCCChhHHHHHHHHHHcCCceEEEEecCCCCccc-ccccCCCeEEEEcc
Q 017760            9 IEGKTFLVTGGLGHVGSALCLELVRRGAYQVRAFDLRTNSPWS-HLLINHGVHCIQGL   65 (366)
Q Consensus         9 ~~~~~VlITGgtGfiG~~L~~~L~~~g~~~V~~~dr~~~~~~~-~~~~~~~v~~i~gD   65 (366)
                      +++++++||||+|.+|+++++.|.+.|+ +|++++|+...... ......++.++++|
T Consensus         4 ~~~k~vlItGas~gIG~~ia~~l~~~G~-~V~~~~r~~~~~~~~~~~~~~~~~~~~~D   60 (261)
T PRK08265          4 LAGKVAIVTGGATLIGAAVARALVAAGA-RVAIVDIDADNGAAVAASLGERARFIATD   60 (261)
T ss_pred             CCCCEEEEECCCChHHHHHHHHHHHCCC-EEEEEeCCHHHHHHHHHHhCCeeEEEEec
Confidence            4568999999999999999999999995 89999997642111 11113457888888

>PRK06924 short chain dehydrogenase; Provisional

Probab=97.56  E-value=0.00012  Score=66.58  Aligned_cols=54  Identities=17%  Similarity=0.192  Sum_probs=40.8

Q ss_pred             CCeEEEEcCCChhHHHHHHHHHHcCCceEEEEecCCCCccc--ccccCCCeEEEEcc
Q 017760           11 GKTFLVTGGLGHVGSALCLELVRRGAYQVRAFDLRTNSPWS--HLLINHGVHCIQGL   65 (366)
Q Consensus        11 ~~~VlITGgtGfiG~~L~~~L~~~g~~~V~~~dr~~~~~~~--~~~~~~~v~~i~gD   65 (366)
                      |++++||||+|++|++++++|.++|+ +|++++|++.....  ......+++++++|
T Consensus         1 ~k~vlItGasggiG~~ia~~l~~~g~-~V~~~~r~~~~~~~~~~~~~~~~~~~~~~D   56 (251)
T PRK06924          1 MRYVIITGTSQGLGEAIANQLLEKGT-HVISISRTENKELTKLAEQYNSNLTFHSLD   56 (251)
T ss_pred             CcEEEEecCCchHHHHHHHHHHhcCC-EEEEEeCCchHHHHHHHhccCCceEEEEec
Confidence            46899999999999999999999995 89999987632111  11113467788888

>PRK09072 short chain dehydrogenase; Provisional

Probab=97.53  E-value=9.5e-05  Score=67.94  Aligned_cols=56  Identities=21%  Similarity=0.232  Sum_probs=42.1

Q ss_pred             ccCCeEEEEcCCChhHHHHHHHHHHcCCceEEEEecCCCCccc--ccc-cCCCeEEEEcc
Q 017760            9 IEGKTFLVTGGLGHVGSALCLELVRRGAYQVRAFDLRTNSPWS--HLL-INHGVHCIQGL   65 (366)
Q Consensus         9 ~~~~~VlITGgtGfiG~~L~~~L~~~g~~~V~~~dr~~~~~~~--~~~-~~~~v~~i~gD   65 (366)
                      +++++++||||+|++|.++++.|+++|+ +|++++|++.....  ..+ .+.++.++.+|
T Consensus         3 ~~~~~vlItG~s~~iG~~ia~~l~~~G~-~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~D   61 (263)
T PRK09072          3 LKDKRVLLTGASGGIGQALAEALAAAGA-RLLLVGRNAEKLEALAARLPYPGRHRWVVAD   61 (263)
T ss_pred             CCCCEEEEECCCchHHHHHHHHHHHCCC-EEEEEECCHHHHHHHHHHHhcCCceEEEEcc
Confidence            4567899999999999999999999995 89999987532211  011 12467788888

>PRK08936 glucose-1-dehydrogenase; Provisional

Probab=97.51  E-value=0.0011  Score=60.86  Aligned_cols=37  Identities=27%  Similarity=0.409  Sum_probs=32.5

Q ss_pred             ccCCeEEEEcCCChhHHHHHHHHHHcCCceEEEEecCC
Q 017760            9 IEGKTFLVTGGLGHVGSALCLELVRRGAYQVRAFDLRT   46 (366)
Q Consensus         9 ~~~~~VlITGgtGfiG~~L~~~L~~~g~~~V~~~dr~~   46 (366)
                      +++++++||||+|.+|.++++.|.++|+ +|++..++.
T Consensus         5 ~~~k~~lItGa~~gIG~~ia~~l~~~G~-~vvi~~~~~   41 (261)
T PRK08936          5 LEGKVVVITGGSTGLGRAMAVRFGKEKA-KVVINYRSD   41 (261)
T ss_pred             CCCCEEEEeCCCChHHHHHHHHHHHCCC-EEEEEeCCC
Confidence            4568999999999999999999999995 788877754

>PRK05693 short chain dehydrogenase; Provisional

Probab=97.51  E-value=8.6e-05  Score=68.70  Aligned_cols=52  Identities=23%  Similarity=0.211  Sum_probs=40.6

Q ss_pred             CCeEEEEcCCChhHHHHHHHHHHcCCceEEEEecCCCCcccccccCCCeEEEEcc
Q 017760           11 GKTFLVTGGLGHVGSALCLELVRRGAYQVRAFDLRTNSPWSHLLINHGVHCIQGL   65 (366)
Q Consensus        11 ~~~VlITGgtGfiG~~L~~~L~~~g~~~V~~~dr~~~~~~~~~~~~~~v~~i~gD   65 (366)
                      |++++||||+|++|+++++.|.++|+ +|++++|+....  ..+...+++++.+|
T Consensus         1 mk~vlItGasggiG~~la~~l~~~G~-~V~~~~r~~~~~--~~~~~~~~~~~~~D   52 (274)
T PRK05693          1 MPVVLITGCSSGIGRALADAFKAAGY-EVWATARKAEDV--EALAAAGFTAVQLD   52 (274)
T ss_pred             CCEEEEecCCChHHHHHHHHHHHCCC-EEEEEeCCHHHH--HHHHHCCCeEEEee
Confidence            47899999999999999999999995 899999875322  22223456777887

>PRK08945 putative oxoacyl-(acyl carrier protein) reductase; Provisional

Probab=97.51  E-value=0.00013  Score=66.26  Aligned_cols=40  Identities=25%  Similarity=0.370  Sum_probs=35.5

Q ss_pred             ccccCCeEEEEcCCChhHHHHHHHHHHcCCceEEEEecCCC
Q 017760            7 EGIEGKTFLVTGGLGHVGSALCLELVRRGAYQVRAFDLRTN   47 (366)
Q Consensus         7 ~~~~~~~VlITGgtGfiG~~L~~~L~~~g~~~V~~~dr~~~   47 (366)
                      ...++++++||||+|++|.+++++|++.|+ +|++++|+..
T Consensus         8 ~~~~~k~vlItG~~g~iG~~la~~l~~~G~-~Vi~~~r~~~   47 (247)
T PRK08945          8 DLLKDRIILVTGAGDGIGREAALTYARHGA-TVILLGRTEE   47 (247)
T ss_pred             cccCCCEEEEeCCCchHHHHHHHHHHHCCC-cEEEEeCCHH
Confidence            345678999999999999999999999995 8999998753

>PRK06196 oxidoreductase; Provisional

Probab=97.50  E-value=8.2e-05  Score=70.51  Aligned_cols=56  Identities=29%  Similarity=0.301  Sum_probs=41.9

Q ss_pred             ccCCeEEEEcCCChhHHHHHHHHHHcCCceEEEEecCCCCcccccccCCCeEEEEcc
Q 017760            9 IEGKTFLVTGGLGHVGSALCLELVRRGAYQVRAFDLRTNSPWSHLLINHGVHCIQGL   65 (366)
Q Consensus         9 ~~~~~VlITGgtGfiG~~L~~~L~~~g~~~V~~~dr~~~~~~~~~~~~~~v~~i~gD   65 (366)
                      +++++|+||||+|++|.++++.|+++|+ +|++++|+..........-.+++++++|
T Consensus        24 l~~k~vlITGasggIG~~~a~~L~~~G~-~Vv~~~R~~~~~~~~~~~l~~v~~~~~D   79 (315)
T PRK06196         24 LSGKTAIVTGGYSGLGLETTRALAQAGA-HVIVPARRPDVAREALAGIDGVEVVMLD   79 (315)
T ss_pred             CCCCEEEEeCCCchHHHHHHHHHHHCCC-EEEEEeCCHHHHHHHHHHhhhCeEEEcc
Confidence            4568999999999999999999999995 8999998754321100001247888888

>COG0300 DltE Short-chain dehydrogenases of various substrate specificities [General function prediction only]

Probab=97.49  E-value=0.00023  Score=65.23  Aligned_cols=58  Identities=29%  Similarity=0.395  Sum_probs=44.2

Q ss_pred             ccccCCeEEEEcCCChhHHHHHHHHHHcCCceEEEEecCCCCccc--ccc---cCCCeEEEEcc
Q 017760            7 EGIEGKTFLVTGGLGHVGSALCLELVRRGAYQVRAFDLRTNSPWS--HLL---INHGVHCIQGL   65 (366)
Q Consensus         7 ~~~~~~~VlITGgtGfiG~~L~~~L~~~g~~~V~~~dr~~~~~~~--~~~---~~~~v~~i~gD   65 (366)
                      ..+++++++|||||+-||..+++.|.++| ++|+++.|+...-..  .++   ..-.++++..|
T Consensus         2 ~~~~~~~~lITGASsGIG~~~A~~lA~~g-~~liLvaR~~~kL~~la~~l~~~~~v~v~vi~~D   64 (265)
T COG0300           2 GPMKGKTALITGASSGIGAELAKQLARRG-YNLILVARREDKLEALAKELEDKTGVEVEVIPAD   64 (265)
T ss_pred             CCCCCcEEEEECCCchHHHHHHHHHHHCC-CEEEEEeCcHHHHHHHHHHHHHhhCceEEEEECc
Confidence            34677899999999999999999999999 589999998643211  111   12356788888

>PRK07814 short chain dehydrogenase; Provisional

Probab=97.49  E-value=0.00012  Score=67.47  Aligned_cols=56  Identities=18%  Similarity=0.235  Sum_probs=42.3

Q ss_pred             ccCCeEEEEcCCChhHHHHHHHHHHcCCceEEEEecCCCCccc--ccc--cCCCeEEEEcc
Q 017760            9 IEGKTFLVTGGLGHVGSALCLELVRRGAYQVRAFDLRTNSPWS--HLL--INHGVHCIQGL   65 (366)
Q Consensus         9 ~~~~~VlITGgtGfiG~~L~~~L~~~g~~~V~~~dr~~~~~~~--~~~--~~~~v~~i~gD   65 (366)
                      +++++++||||+|++|.++++.|+++|+ +|++++|++.....  ..+  ...+++++.+|
T Consensus         8 ~~~~~vlItGasggIG~~~a~~l~~~G~-~Vi~~~r~~~~~~~~~~~l~~~~~~~~~~~~D   67 (263)
T PRK07814          8 LDDQVAVVTGAGRGLGAAIALAFAEAGA-DVLIAARTESQLDEVAEQIRAAGRRAHVVAAD   67 (263)
T ss_pred             CCCCEEEEECCCChHHHHHHHHHHHCCC-EEEEEeCCHHHHHHHHHHHHhcCCcEEEEEcc
Confidence            5678999999999999999999999996 89999987532110  111  12457777888

>TIGR02415 23BDH acetoin reductases

Probab=97.47  E-value=0.00028  Score=64.27  Aligned_cols=34  Identities=35%  Similarity=0.508  Sum_probs=31.0

Q ss_pred             CeEEEEcCCChhHHHHHHHHHHcCCceEEEEecCC
Q 017760           12 KTFLVTGGLGHVGSALCLELVRRGAYQVRAFDLRT   46 (366)
Q Consensus        12 ~~VlITGgtGfiG~~L~~~L~~~g~~~V~~~dr~~   46 (366)
                      ++++||||+|.+|.++++.|++.|. +|+++++++
T Consensus         1 k~~lItG~sg~iG~~la~~l~~~G~-~v~~~~r~~   34 (254)
T TIGR02415         1 KVALVTGGAQGIGKGIAERLAKDGF-AVAVADLNE   34 (254)
T ss_pred             CEEEEeCCCchHHHHHHHHHHHCCC-EEEEEeCCH
Confidence            4799999999999999999999995 899998864

One member of this family, as characterized in Klebsiella terrigena, is described as able to interconvert acetoin + NADH with meso-2,3-butanediol + NAD(+). It is also called capable of irreversible reduction of diacetyl with NADH to acetoin. Blomqvist, et al. decline to specify either EC 1.1.1.4 which is (R,R)-butanediol dehydrogenase, or EC 1.1.1.5, which is acetoin dehydrogenase without a specified stereochemistry, for this enzyme. This enzyme is a homotetramer in the family of short chain dehydrogenases (pfam00106). Another member of this family, from Corynebacterium glutamicum, is called L-2,3-butanediol dehydrogenase (PubMed:11577733).

>TIGR03325 BphB_TodD cis-2,3-dihydrobiphenyl-2,3-diol dehydrogenase

Probab=97.46  E-value=0.00016  Score=66.53  Aligned_cols=56  Identities=27%  Similarity=0.391  Sum_probs=42.0

Q ss_pred             ccCCeEEEEcCCChhHHHHHHHHHHcCCceEEEEecCCCCccc-ccccCCCeEEEEcc
Q 017760            9 IEGKTFLVTGGLGHVGSALCLELVRRGAYQVRAFDLRTNSPWS-HLLINHGVHCIQGL   65 (366)
Q Consensus         9 ~~~~~VlITGgtGfiG~~L~~~L~~~g~~~V~~~dr~~~~~~~-~~~~~~~v~~i~gD   65 (366)
                      +++++++||||+|.||+++++.|++.|+ +|++++|+...... .......+..+++|
T Consensus         3 ~~~k~vlItGas~gIG~~ia~~l~~~G~-~V~~~~r~~~~~~~l~~~~~~~~~~~~~D   59 (262)
T TIGR03325         3 LKGEVVLVTGGASGLGRAIVDRFVAEGA-RVAVLDKSAAGLQELEAAHGDAVVGVEGD   59 (262)
T ss_pred             cCCcEEEEECCCChHHHHHHHHHHHCCC-EEEEEeCCHHHHHHHHhhcCCceEEEEec
Confidence            4568999999999999999999999995 89999987532111 11112357778888

Members of this family occur as the BphD protein of biphenyl catabolism and as the TodD protein of toluene catabolism. Members catalyze the second step in each pathway and proved interchangeable when tested; the first and fourth enzymes in each pathway confer metabolic specificity. In the context of biphenyl degradation, the enzyme acts as cis-2,3-dihydrobiphenyl-2,3-diol dehydrogenase (EC 1.3.1.56), while in toluene degradation it acts as cis-toluene dihydrodiol dehydrogenase.

>PRK12742 oxidoreductase; Provisional

Probab=97.44  E-value=0.00015  Score=65.41  Aligned_cols=37  Identities=35%  Similarity=0.493  Sum_probs=32.2

Q ss_pred             ccCCeEEEEcCCChhHHHHHHHHHHcCCceEEEEecCC
Q 017760            9 IEGKTFLVTGGLGHVGSALCLELVRRGAYQVRAFDLRT   46 (366)
Q Consensus         9 ~~~~~VlITGgtGfiG~~L~~~L~~~g~~~V~~~dr~~   46 (366)
                      +++++|+||||+|.||+++++.|.++|+ +|++.+++.
T Consensus         4 ~~~k~vlItGasggIG~~~a~~l~~~G~-~v~~~~~~~   40 (237)
T PRK12742          4 FTGKKVLVLGGSRGIGAAIVRRFVTDGA-NVRFTYAGS   40 (237)
T ss_pred             CCCCEEEEECCCChHHHHHHHHHHHCCC-EEEEecCCC
Confidence            4568999999999999999999999995 888876643

>PRK06953 short chain dehydrogenase; Provisional

Probab=97.42  E-value=0.00017  Score=64.47  Aligned_cols=52  Identities=19%  Similarity=0.142  Sum_probs=40.8

Q ss_pred             CCeEEEEcCCChhHHHHHHHHHHcCCceEEEEecCCCCcccccccCCCeEEEEcc
Q 017760           11 GKTFLVTGGLGHVGSALCLELVRRGAYQVRAFDLRTNSPWSHLLINHGVHCIQGL   65 (366)
Q Consensus        11 ~~~VlITGgtGfiG~~L~~~L~~~g~~~V~~~dr~~~~~~~~~~~~~~v~~i~gD   65 (366)
                      |++++||||+|.+|++++++|.+.|+ +|++++++....  ..+...+++++.+|
T Consensus         1 ~~~vlvtG~sg~iG~~la~~L~~~G~-~v~~~~r~~~~~--~~~~~~~~~~~~~D   52 (222)
T PRK06953          1 MKTVLIVGASRGIGREFVRQYRADGW-RVIATARDAAAL--AALQALGAEALALD   52 (222)
T ss_pred             CceEEEEcCCCchhHHHHHHHHhCCC-EEEEEECCHHHH--HHHHhccceEEEec
Confidence            46899999999999999999999995 899999875432  22223456778888

>PRK08177 short chain dehydrogenase; Provisional

Probab=97.42  E-value=0.00024  Score=63.65  Aligned_cols=53  Identities=26%  Similarity=0.171  Sum_probs=40.8

Q ss_pred             CCeEEEEcCCChhHHHHHHHHHHcCCceEEEEecCCCCcccccccCCCeEEEEcc
Q 017760           11 GKTFLVTGGLGHVGSALCLELVRRGAYQVRAFDLRTNSPWSHLLINHGVHCIQGL   65 (366)
Q Consensus        11 ~~~VlITGgtGfiG~~L~~~L~~~g~~~V~~~dr~~~~~~~~~~~~~~v~~i~gD   65 (366)
                      |++++||||+|++|+++++.|.++|+ +|++++|++...... ....++.+..+|
T Consensus         1 ~k~vlItG~sg~iG~~la~~l~~~G~-~V~~~~r~~~~~~~~-~~~~~~~~~~~D   53 (225)
T PRK08177          1 KRTALIIGASRGLGLGLVDRLLERGW-QVTATVRGPQQDTAL-QALPGVHIEKLD   53 (225)
T ss_pred             CCEEEEeCCCchHHHHHHHHHHhCCC-EEEEEeCCCcchHHH-HhccccceEEcC
Confidence            46899999999999999999999995 899999986543211 112356677777

>PRK07024 short chain dehydrogenase; Provisional

Probab=97.40  E-value=0.00016  Score=66.26  Aligned_cols=54  Identities=24%  Similarity=0.258  Sum_probs=40.5

Q ss_pred             CCeEEEEcCCChhHHHHHHHHHHcCCceEEEEecCCCCccc--ccccC-CCeEEEEcc
Q 017760           11 GKTFLVTGGLGHVGSALCLELVRRGAYQVRAFDLRTNSPWS--HLLIN-HGVHCIQGL   65 (366)
Q Consensus        11 ~~~VlITGgtGfiG~~L~~~L~~~g~~~V~~~dr~~~~~~~--~~~~~-~~v~~i~gD   65 (366)
                      +++++||||+|.+|+++++.|.++|+ +|+++++++.....  ..... .++.++++|
T Consensus         2 ~~~vlItGas~gIG~~la~~l~~~G~-~v~~~~r~~~~~~~~~~~~~~~~~~~~~~~D   58 (257)
T PRK07024          2 PLKVFITGASSGIGQALAREYARQGA-TLGLVARRTDALQAFAARLPKAARVSVYAAD   58 (257)
T ss_pred             CCEEEEEcCCcHHHHHHHHHHHHCCC-EEEEEeCCHHHHHHHHHhcccCCeeEEEEcC
Confidence            46899999999999999999999995 89999987532211  11111 157788888

>PRK07904 short chain dehydrogenase; Provisional

Probab=97.40  E-value=0.00029  Score=64.61  Aligned_cols=56  Identities=20%  Similarity=0.269  Sum_probs=41.6

Q ss_pred             cCCeEEEEcCCChhHHHHHHHHHHcCCceEEEEecCCCCccc---ccc---cCCCeEEEEcc
Q 017760           10 EGKTFLVTGGLGHVGSALCLELVRRGAYQVRAFDLRTNSPWS---HLL---INHGVHCIQGL   65 (366)
Q Consensus        10 ~~~~VlITGgtGfiG~~L~~~L~~~g~~~V~~~dr~~~~~~~---~~~---~~~~v~~i~gD   65 (366)
                      ..++|+||||+|.+|.+++++|+++|.++|++++|+++....   +.+   ...+++++++|
T Consensus         7 ~~~~vlItGas~giG~~la~~l~~~gg~~V~~~~r~~~~~~~~~~~~l~~~~~~~v~~~~~D   68 (253)
T PRK07904          7 NPQTILLLGGTSEIGLAICERYLKNAPARVVLAALPDDPRRDAAVAQMKAAGASSVEVIDFD   68 (253)
T ss_pred             CCcEEEEEcCCcHHHHHHHHHHHhcCCCeEEEEeCCcchhHHHHHHHHHhcCCCceEEEEec
Confidence            457899999999999999999999852389999988654110   111   12367888888

>PRK06484 short chain dehydrogenase; Validated

Probab=97.39  E-value=0.001  Score=67.48  Aligned_cols=36  Identities=19%  Similarity=0.347  Sum_probs=32.9

Q ss_pred             cCCeEEEEcCCChhHHHHHHHHHHcCCceEEEEecCC
Q 017760           10 EGKTFLVTGGLGHVGSALCLELVRRGAYQVRAFDLRT   46 (366)
Q Consensus        10 ~~~~VlITGgtGfiG~~L~~~L~~~g~~~V~~~dr~~   46 (366)
                      .+++++||||+|.||.++++.|.++|+ +|++++|+.
T Consensus       268 ~~k~~lItGas~gIG~~~a~~l~~~G~-~V~~~~r~~  303 (520)
T PRK06484        268 SPRVVAITGGARGIGRAVADRFAAAGD-RLLIIDRDA  303 (520)
T ss_pred             CCCEEEEECCCcHHHHHHHHHHHHCCC-EEEEEeCCH
Confidence            468899999999999999999999995 899999864

>PRK12367 short chain dehydrogenase; Provisional

Probab=97.38  E-value=0.00029  Score=64.42  Aligned_cols=38  Identities=29%  Similarity=0.420  Sum_probs=34.2

Q ss_pred             cccCCeEEEEcCCChhHHHHHHHHHHcCCceEEEEecCC
Q 017760            8 GIEGKTFLVTGGLGHVGSALCLELVRRGAYQVRAFDLRT   46 (366)
Q Consensus         8 ~~~~~~VlITGgtGfiG~~L~~~L~~~g~~~V~~~dr~~   46 (366)
                      .+++++++||||+|.+|+++++.|.++|+ +|++++|++
T Consensus        11 ~l~~k~~lITGas~gIG~ala~~l~~~G~-~Vi~~~r~~   48 (245)
T PRK12367         11 TWQGKRIGITGASGALGKALTKAFRAKGA-KVIGLTHSK   48 (245)
T ss_pred             hhCCCEEEEEcCCcHHHHHHHHHHHHCCC-EEEEEECCc
Confidence            35568999999999999999999999995 899999876

>PRK06171 sorbitol-6-phosphate 2-dehydrogenase; Provisional

Probab=97.38  E-value=0.00044  Score=63.55  Aligned_cols=51  Identities=27%  Similarity=0.423  Sum_probs=42.1

Q ss_pred             ccCCeEEEEcCCChhHHHHHHHHHHcCCceEEEEecCCCCcccccccCCCeEEEEcc
Q 017760            9 IEGKTFLVTGGLGHVGSALCLELVRRGAYQVRAFDLRTNSPWSHLLINHGVHCIQGL   65 (366)
Q Consensus         9 ~~~~~VlITGgtGfiG~~L~~~L~~~g~~~V~~~dr~~~~~~~~~~~~~~v~~i~gD   65 (366)
                      +++++++||||+|.+|.++++.|.++|. +|++.+++.....     ..++.++++|
T Consensus         7 l~~k~vlItG~s~gIG~~la~~l~~~G~-~v~~~~~~~~~~~-----~~~~~~~~~D   57 (266)
T PRK06171          7 LQGKIIIVTGGSSGIGLAIVKELLANGA-NVVNADIHGGDGQ-----HENYQFVPTD   57 (266)
T ss_pred             CCCCEEEEeCCCChHHHHHHHHHHHCCC-EEEEEeCCccccc-----cCceEEEEcc
Confidence            5568999999999999999999999995 8999998764321     2467788888

>PRK07454 short chain dehydrogenase; Provisional

Probab=97.37  E-value=0.0002  Score=64.85  Aligned_cols=55  Identities=15%  Similarity=0.086  Sum_probs=41.5

Q ss_pred             cCCeEEEEcCCChhHHHHHHHHHHcCCceEEEEecCCCCccc--ccc--cCCCeEEEEcc
Q 017760           10 EGKTFLVTGGLGHVGSALCLELVRRGAYQVRAFDLRTNSPWS--HLL--INHGVHCIQGL   65 (366)
Q Consensus        10 ~~~~VlITGgtGfiG~~L~~~L~~~g~~~V~~~dr~~~~~~~--~~~--~~~~v~~i~gD   65 (366)
                      +|++++||||+|.+|+.+++.|+++|. +|++++|++.....  ...  ...++.++.+|
T Consensus         5 ~~k~vlItG~sg~iG~~la~~l~~~G~-~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~D   63 (241)
T PRK07454          5 SMPRALITGASSGIGKATALAFAKAGW-DLALVARSQDALEALAAELRSTGVKAAAYSID   63 (241)
T ss_pred             CCCEEEEeCCCchHHHHHHHHHHHCCC-EEEEEeCCHHHHHHHHHHHHhCCCcEEEEEcc
Confidence            357899999999999999999999995 89999987543211  001  12457788888

>PRK06200 2,3-dihydroxy-2,3-dihydrophenylpropionate dehydrogenase; Provisional

Probab=97.37  E-value=0.00022  Score=65.51  Aligned_cols=57  Identities=25%  Similarity=0.348  Sum_probs=42.7

Q ss_pred             cccCCeEEEEcCCChhHHHHHHHHHHcCCceEEEEecCCCCccc-ccccCCCeEEEEcc
Q 017760            8 GIEGKTFLVTGGLGHVGSALCLELVRRGAYQVRAFDLRTNSPWS-HLLINHGVHCIQGL   65 (366)
Q Consensus         8 ~~~~~~VlITGgtGfiG~~L~~~L~~~g~~~V~~~dr~~~~~~~-~~~~~~~v~~i~gD   65 (366)
                      .+++++++||||+|.+|+++++.|.+.|+ +|++++|++..... .......+.++++|
T Consensus         3 ~~~~k~vlVtGas~gIG~~ia~~l~~~G~-~V~~~~r~~~~~~~~~~~~~~~~~~~~~D   60 (263)
T PRK06200          3 WLHGQVALITGGGSGIGRALVERFLAEGA-RVAVLERSAEKLASLRQRFGDHVLVVEGD   60 (263)
T ss_pred             CCCCCEEEEeCCCchHHHHHHHHHHHCCC-EEEEEeCCHHHHHHHHHHhCCcceEEEcc
Confidence            35678999999999999999999999995 89999987532211 11112457788888

>PRK06483 dihydromonapterin reductase; Provisional

Probab=97.34  E-value=0.0003  Score=63.45  Aligned_cols=53  Identities=26%  Similarity=0.307  Sum_probs=41.1

Q ss_pred             CCeEEEEcCCChhHHHHHHHHHHcCCceEEEEecCCCCcccccccCCCeEEEEcc
Q 017760           11 GKTFLVTGGLGHVGSALCLELVRRGAYQVRAFDLRTNSPWSHLLINHGVHCIQGL   65 (366)
Q Consensus        11 ~~~VlITGgtGfiG~~L~~~L~~~g~~~V~~~dr~~~~~~~~~~~~~~v~~i~gD   65 (366)
                      +++++||||+|.+|+++++.|.+.|+ +|++++|++... .......+++++.+|
T Consensus         2 ~k~vlItGas~gIG~~ia~~l~~~G~-~V~~~~r~~~~~-~~~~~~~~~~~~~~D   54 (236)
T PRK06483          2 PAPILITGAGQRIGLALAWHLLAQGQ-PVIVSYRTHYPA-IDGLRQAGAQCIQAD   54 (236)
T ss_pred             CceEEEECCCChHHHHHHHHHHHCCC-eEEEEeCCchhH-HHHHHHcCCEEEEcC
Confidence            46899999999999999999999995 899999876432 122222346778888

>PRK08703 short chain dehydrogenase; Provisional

Probab=97.34  E-value=0.00031  Score=63.49  Aligned_cols=39  Identities=26%  Similarity=0.313  Sum_probs=34.9

Q ss_pred             cccCCeEEEEcCCChhHHHHHHHHHHcCCceEEEEecCCC
Q 017760            8 GIEGKTFLVTGGLGHVGSALCLELVRRGAYQVRAFDLRTN   47 (366)
Q Consensus         8 ~~~~~~VlITGgtGfiG~~L~~~L~~~g~~~V~~~dr~~~   47 (366)
                      .+++++++||||+|++|+++++.|.++|+ +|++++|+..
T Consensus         3 ~l~~k~vlItG~sggiG~~la~~l~~~g~-~V~~~~r~~~   41 (239)
T PRK08703          3 TLSDKTILVTGASQGLGEQVAKAYAAAGA-TVILVARHQK   41 (239)
T ss_pred             CCCCCEEEEECCCCcHHHHHHHHHHHcCC-EEEEEeCChH
Confidence            35668999999999999999999999995 8999998864

>PRK08993 2-deoxy-D-gluconate 3-dehydrogenase; Validated

Probab=97.32  E-value=0.00034  Score=63.98  Aligned_cols=63  Identities=19%  Similarity=0.261  Sum_probs=44.9

Q ss_pred             CCccccccccCCeEEEEcCCChhHHHHHHHHHHcCCceEEEEecCCCCccccccc--CCCeEEEEcc
Q 017760            1 MHLSENEGIEGKTFLVTGGLGHVGSALCLELVRRGAYQVRAFDLRTNSPWSHLLI--NHGVHCIQGL   65 (366)
Q Consensus         1 m~~~~~~~~~~~~VlITGgtGfiG~~L~~~L~~~g~~~V~~~dr~~~~~~~~~~~--~~~v~~i~gD   65 (366)
                      |.++.. .+++++++||||+|.||.+++++|.+.|+ +|++++++........+.  ...+..+++|
T Consensus         1 ~~~~~~-~l~~k~~lItG~~~gIG~a~a~~l~~~G~-~vv~~~~~~~~~~~~~~~~~~~~~~~~~~D   65 (253)
T PRK08993          1 MILDAF-SLEGKVAVVTGCDTGLGQGMALGLAEAGC-DIVGINIVEPTETIEQVTALGRRFLSLTAD   65 (253)
T ss_pred             Cccccc-CCCCCEEEEECCCchHHHHHHHHHHHCCC-EEEEecCcchHHHHHHHHhcCCeEEEEECC
Confidence            444443 35678999999999999999999999995 899888764322111211  2356777888

>PRK08278 short chain dehydrogenase; Provisional

Probab=97.32  E-value=0.00037  Score=64.59  Aligned_cols=38  Identities=29%  Similarity=0.484  Sum_probs=34.4

Q ss_pred             ccCCeEEEEcCCChhHHHHHHHHHHcCCceEEEEecCCC
Q 017760            9 IEGKTFLVTGGLGHVGSALCLELVRRGAYQVRAFDLRTN   47 (366)
Q Consensus         9 ~~~~~VlITGgtGfiG~~L~~~L~~~g~~~V~~~dr~~~   47 (366)
                      +++++++||||+|++|.++++.|.++|+ +|++++|+.+
T Consensus         4 ~~~k~vlItGas~gIG~~ia~~l~~~G~-~V~~~~r~~~   41 (273)
T PRK08278          4 LSGKTLFITGASRGIGLAIALRAARDGA-NIVIAAKTAE   41 (273)
T ss_pred             CCCCEEEEECCCchHHHHHHHHHHHCCC-EEEEEecccc
Confidence            5568999999999999999999999995 8999998764

>PRK07478 short chain dehydrogenase; Provisional

Probab=97.32  E-value=0.00029  Score=64.36  Aligned_cols=56  Identities=21%  Similarity=0.225  Sum_probs=41.9

Q ss_pred             ccCCeEEEEcCCChhHHHHHHHHHHcCCceEEEEecCCCCccc--cccc--CCCeEEEEcc
Q 017760            9 IEGKTFLVTGGLGHVGSALCLELVRRGAYQVRAFDLRTNSPWS--HLLI--NHGVHCIQGL   65 (366)
Q Consensus         9 ~~~~~VlITGgtGfiG~~L~~~L~~~g~~~V~~~dr~~~~~~~--~~~~--~~~v~~i~gD   65 (366)
                      +++++++||||+|.+|.++++.|.+.|+ +|++++|++.....  .++.  ..++.++.+|
T Consensus         4 ~~~k~~lItGas~giG~~ia~~l~~~G~-~v~~~~r~~~~~~~~~~~~~~~~~~~~~~~~D   63 (254)
T PRK07478          4 LNGKVAIITGASSGIGRAAAKLFAREGA-KVVVGARRQAELDQLVAEIRAEGGEAVALAGD   63 (254)
T ss_pred             CCCCEEEEeCCCChHHHHHHHHHHHCCC-EEEEEeCCHHHHHHHHHHHHhcCCcEEEEEcC
Confidence            4567999999999999999999999995 89999987543211  1111  2356777888

>PRK06197 short chain dehydrogenase; Provisional

Probab=97.30  E-value=0.00033  Score=66.05  Aligned_cols=56  Identities=18%  Similarity=0.095  Sum_probs=42.3

Q ss_pred             ccCCeEEEEcCCChhHHHHHHHHHHcCCceEEEEecCCCCccc--ccc----cCCCeEEEEcc
Q 017760            9 IEGKTFLVTGGLGHVGSALCLELVRRGAYQVRAFDLRTNSPWS--HLL----INHGVHCIQGL   65 (366)
Q Consensus         9 ~~~~~VlITGgtGfiG~~L~~~L~~~g~~~V~~~dr~~~~~~~--~~~----~~~~v~~i~gD   65 (366)
                      +++++|+||||+|+||+++++.|.++|+ +|++++|+......  ..+    ....++++++|
T Consensus        14 ~~~k~vlItGas~gIG~~~a~~l~~~G~-~vi~~~r~~~~~~~~~~~l~~~~~~~~~~~~~~D   75 (306)
T PRK06197         14 QSGRVAVVTGANTGLGYETAAALAAKGA-HVVLAVRNLDKGKAAAARITAATPGADVTLQELD   75 (306)
T ss_pred             CCCCEEEEcCCCCcHHHHHHHHHHHCCC-EEEEEeCCHHHHHHHHHHHHHhCCCCceEEEECC
Confidence            4568999999999999999999999995 89999887533211  111    12457888888

>PRK12481 2-deoxy-D-gluconate 3-dehydrogenase; Provisional

Probab=97.28  E-value=0.00031  Score=64.19  Aligned_cols=56  Identities=18%  Similarity=0.337  Sum_probs=42.2

Q ss_pred             ccCCeEEEEcCCChhHHHHHHHHHHcCCceEEEEecCCCCcccccc--cCCCeEEEEcc
Q 017760            9 IEGKTFLVTGGLGHVGSALCLELVRRGAYQVRAFDLRTNSPWSHLL--INHGVHCIQGL   65 (366)
Q Consensus         9 ~~~~~VlITGgtGfiG~~L~~~L~~~g~~~V~~~dr~~~~~~~~~~--~~~~v~~i~gD   65 (366)
                      +++++++||||+|.||++++++|.+.|+ +|++++++.........  ...++.++++|
T Consensus         6 l~~k~~lItGas~gIG~aia~~l~~~G~-~vv~~~~~~~~~~~~~~~~~~~~~~~~~~D   63 (251)
T PRK12481          6 LNGKVAIITGCNTGLGQGMAIGLAKAGA-DIVGVGVAEAPETQAQVEALGRKFHFITAD   63 (251)
T ss_pred             cCCCEEEEeCCCchHHHHHHHHHHHCCC-EEEEecCchHHHHHHHHHHcCCeEEEEEeC
Confidence            5678999999999999999999999995 89998876432111111  13457788888

>PRK06949 short chain dehydrogenase; Provisional

Probab=97.27  E-value=0.00031  Score=64.14  Aligned_cols=56  Identities=25%  Similarity=0.265  Sum_probs=42.2

Q ss_pred             ccCCeEEEEcCCChhHHHHHHHHHHcCCceEEEEecCCCCccc--ccc--cCCCeEEEEcc
Q 017760            9 IEGKTFLVTGGLGHVGSALCLELVRRGAYQVRAFDLRTNSPWS--HLL--INHGVHCIQGL   65 (366)
Q Consensus         9 ~~~~~VlITGgtGfiG~~L~~~L~~~g~~~V~~~dr~~~~~~~--~~~--~~~~v~~i~gD   65 (366)
                      +++++|+||||+|++|+++++.|.+.|+ +|++++|++.....  ..+  ...++..+.+|
T Consensus         7 ~~~k~ilItGasg~IG~~~a~~l~~~G~-~Vi~~~r~~~~~~~~~~~l~~~~~~~~~~~~D   66 (258)
T PRK06949          7 LEGKVALVTGASSGLGARFAQVLAQAGA-KVVLASRRVERLKELRAEIEAEGGAAHVVSLD   66 (258)
T ss_pred             CCCCEEEEECCCcHHHHHHHHHHHHCCC-EEEEEeCCHHHHHHHHHHHHhcCCcEEEEEec
Confidence            5578999999999999999999999995 89999987543111  111  12356778888

>PRK05866 short chain dehydrogenase; Provisional

Probab=97.24  E-value=0.00053  Score=64.35  Aligned_cols=56  Identities=25%  Similarity=0.310  Sum_probs=41.7

Q ss_pred             ccCCeEEEEcCCChhHHHHHHHHHHcCCceEEEEecCCCCccc--ccc--cCCCeEEEEcc
Q 017760            9 IEGKTFLVTGGLGHVGSALCLELVRRGAYQVRAFDLRTNSPWS--HLL--INHGVHCIQGL   65 (366)
Q Consensus         9 ~~~~~VlITGgtGfiG~~L~~~L~~~g~~~V~~~dr~~~~~~~--~~~--~~~~v~~i~gD   65 (366)
                      +.+++++||||+|.+|.++++.|.++|+ +|++++|+......  ..+  ...++.++++|
T Consensus        38 ~~~k~vlItGasggIG~~la~~La~~G~-~Vi~~~R~~~~l~~~~~~l~~~~~~~~~~~~D   97 (293)
T PRK05866         38 LTGKRILLTGASSGIGEAAAEQFARRGA-TVVAVARREDLLDAVADRITRAGGDAMAVPCD   97 (293)
T ss_pred             CCCCEEEEeCCCcHHHHHHHHHHHHCCC-EEEEEECCHHHHHHHHHHHHhcCCcEEEEEcc
Confidence            4568899999999999999999999995 89999998532111  111  12346777888

>PRK08251 short chain dehydrogenase; Provisional

Probab=97.23  E-value=0.00033  Score=63.60  Aligned_cols=54  Identities=19%  Similarity=0.179  Sum_probs=40.7

Q ss_pred             CCeEEEEcCCChhHHHHHHHHHHcCCceEEEEecCCCCccc--ccc----cCCCeEEEEcc
Q 017760           11 GKTFLVTGGLGHVGSALCLELVRRGAYQVRAFDLRTNSPWS--HLL----INHGVHCIQGL   65 (366)
Q Consensus        11 ~~~VlITGgtGfiG~~L~~~L~~~g~~~V~~~dr~~~~~~~--~~~----~~~~v~~i~gD   65 (366)
                      +++++||||+|.+|++++++|.+.|. +|++.+|++.....  ..+    ....++++++|
T Consensus         2 ~k~vlItGas~giG~~la~~l~~~g~-~v~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~~D   61 (248)
T PRK08251          2 RQKILITGASSGLGAGMAREFAAKGR-DLALCARRTDRLEELKAELLARYPGIKVAVAALD   61 (248)
T ss_pred             CCEEEEECCCCHHHHHHHHHHHHcCC-EEEEEeCCHHHHHHHHHHHHhhCCCceEEEEEcC
Confidence            46899999999999999999999995 89999987533211  000    12357788888

>PRK08277 D-mannonate oxidoreductase; Provisional

Probab=97.22  E-value=0.00042  Score=64.21  Aligned_cols=57  Identities=26%  Similarity=0.395  Sum_probs=42.7

Q ss_pred             cccCCeEEEEcCCChhHHHHHHHHHHcCCceEEEEecCCCCccc--cccc--CCCeEEEEcc
Q 017760            8 GIEGKTFLVTGGLGHVGSALCLELVRRGAYQVRAFDLRTNSPWS--HLLI--NHGVHCIQGL   65 (366)
Q Consensus         8 ~~~~~~VlITGgtGfiG~~L~~~L~~~g~~~V~~~dr~~~~~~~--~~~~--~~~v~~i~gD   65 (366)
                      .+++++++||||+|.+|+++++.|.+.|+ +|++++|+......  ..+.  ..++.++++|
T Consensus         7 ~~~~k~vlVtGas~giG~~ia~~l~~~G~-~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~D   67 (278)
T PRK08277          7 SLKGKVAVITGGGGVLGGAMAKELARAGA-KVAILDRNQEKAEAVVAEIKAAGGEALAVKAD   67 (278)
T ss_pred             ccCCCEEEEeCCCchHHHHHHHHHHHCCC-EEEEEeCCHHHHHHHHHHHHhcCCeEEEEECC
Confidence            35678999999999999999999999995 89999987532211  1111  2357788888

>COG4221 Short-chain alcohol dehydrogenase of unknown specificity [General function prediction only]

Probab=97.17  E-value=0.0038  Score=56.09  Aligned_cols=38  Identities=32%  Similarity=0.437  Sum_probs=34.1

Q ss_pred             ccCCeEEEEcCCChhHHHHHHHHHHcCCceEEEEecCCC
Q 017760            9 IEGKTFLVTGGLGHVGSALCLELVRRGAYQVRAFDLRTN   47 (366)
Q Consensus         9 ~~~~~VlITGgtGfiG~~L~~~L~~~g~~~V~~~dr~~~   47 (366)
                      .+.+.++|||||+-+|.+.++.|.+.|+ +|++..|+..
T Consensus         4 ~~~kv~lITGASSGiG~A~A~~l~~~G~-~vvl~aRR~d   41 (246)
T COG4221           4 LKGKVALITGASSGIGEATARALAEAGA-KVVLAARREE   41 (246)
T ss_pred             CCCcEEEEecCcchHHHHHHHHHHHCCC-eEEEEeccHH
Confidence            3457899999999999999999999995 8999999864

>PRK07453 protochlorophyllide oxidoreductase; Validated

Probab=97.14  E-value=0.00068  Score=64.40  Aligned_cols=56  Identities=20%  Similarity=0.068  Sum_probs=41.9

Q ss_pred             ccCCeEEEEcCCChhHHHHHHHHHHcCCceEEEEecCCCCccc--ccc--cCCCeEEEEcc
Q 017760            9 IEGKTFLVTGGLGHVGSALCLELVRRGAYQVRAFDLRTNSPWS--HLL--INHGVHCIQGL   65 (366)
Q Consensus         9 ~~~~~VlITGgtGfiG~~L~~~L~~~g~~~V~~~dr~~~~~~~--~~~--~~~~v~~i~gD   65 (366)
                      +++++++||||+|+||.++++.|+++|+ +|++++|+......  ..+  ....+.++++|
T Consensus         4 ~~~k~vlVTGas~gIG~~~a~~L~~~G~-~V~~~~r~~~~~~~~~~~l~~~~~~~~~~~~D   63 (322)
T PRK07453          4 DAKGTVIITGASSGVGLYAAKALAKRGW-HVIMACRNLKKAEAAAQELGIPPDSYTIIHID   63 (322)
T ss_pred             CCCCEEEEEcCCChHHHHHHHHHHHCCC-EEEEEECCHHHHHHHHHHhhccCCceEEEEec
Confidence            3568899999999999999999999994 89999987532211  111  12357788888

>PRK06947 glucose-1-dehydrogenase; Provisional

Probab=97.12  E-value=0.00063  Score=61.73  Aligned_cols=54  Identities=20%  Similarity=0.188  Sum_probs=38.5

Q ss_pred             CCeEEEEcCCChhHHHHHHHHHHcCCceEEEEecCCCCccc---ccc--cCCCeEEEEcc
Q 017760           11 GKTFLVTGGLGHVGSALCLELVRRGAYQVRAFDLRTNSPWS---HLL--INHGVHCIQGL   65 (366)
Q Consensus        11 ~~~VlITGgtGfiG~~L~~~L~~~g~~~V~~~dr~~~~~~~---~~~--~~~~v~~i~gD   65 (366)
                      +++|+||||+|++|+++++.|.++|+ +|++.+++++....   ..+  ...++..+++|
T Consensus         2 ~k~ilItGas~giG~~la~~l~~~g~-~v~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~D   60 (248)
T PRK06947          2 RKVVLITGASRGIGRATAVLAAARGW-SVGINYARDAAAAEETADAVRAAGGRACVVAGD   60 (248)
T ss_pred             CcEEEEeCCCCcHHHHHHHHHHHCCC-EEEEEeCCCHHHHHHHHHHHHhcCCcEEEEEec
Confidence            46899999999999999999999995 78776554322111   111  12357778887

>PRK07035 short chain dehydrogenase; Provisional

Probab=97.12  E-value=0.00072  Score=61.54  Aligned_cols=56  Identities=21%  Similarity=0.268  Sum_probs=41.0

Q ss_pred             ccCCeEEEEcCCChhHHHHHHHHHHcCCceEEEEecCCCCccc--ccc--cCCCeEEEEcc
Q 017760            9 IEGKTFLVTGGLGHVGSALCLELVRRGAYQVRAFDLRTNSPWS--HLL--INHGVHCIQGL   65 (366)
Q Consensus         9 ~~~~~VlITGgtGfiG~~L~~~L~~~g~~~V~~~dr~~~~~~~--~~~--~~~~v~~i~gD   65 (366)
                      +++++++||||+|++|.++++.|.+.|+ +|++++++......  ..+  ....+.++++|
T Consensus         6 l~~k~vlItGas~gIG~~l~~~l~~~G~-~Vi~~~r~~~~~~~~~~~~~~~~~~~~~~~~D   65 (252)
T PRK07035          6 LTGKIALVTGASRGIGEAIAKLLAQQGA-HVIVSSRKLDGCQAVADAIVAAGGKAEALACH   65 (252)
T ss_pred             cCCCEEEEECCCcHHHHHHHHHHHHCCC-EEEEEeCCHHHHHHHHHHHHhcCCeEEEEEcC
Confidence            5568999999999999999999999995 89999987532110  111  12345667777

>PRK05867 short chain dehydrogenase; Provisional

Probab=97.10  E-value=0.00058  Score=62.33  Aligned_cols=56  Identities=23%  Similarity=0.215  Sum_probs=41.8

Q ss_pred             ccCCeEEEEcCCChhHHHHHHHHHHcCCceEEEEecCCCCccc--ccc--cCCCeEEEEcc
Q 017760            9 IEGKTFLVTGGLGHVGSALCLELVRRGAYQVRAFDLRTNSPWS--HLL--INHGVHCIQGL   65 (366)
Q Consensus         9 ~~~~~VlITGgtGfiG~~L~~~L~~~g~~~V~~~dr~~~~~~~--~~~--~~~~v~~i~gD   65 (366)
                      +++++++||||+|.+|.++++.|++.|+ +|++.+|+......  ..+  ...++..+.+|
T Consensus         7 ~~~k~vlVtGas~gIG~~ia~~l~~~G~-~V~~~~r~~~~~~~~~~~l~~~~~~~~~~~~D   66 (253)
T PRK05867          7 LHGKRALITGASTGIGKRVALAYVEAGA-QVAIAARHLDALEKLADEIGTSGGKVVPVCCD   66 (253)
T ss_pred             CCCCEEEEECCCchHHHHHHHHHHHCCC-EEEEEcCCHHHHHHHHHHHHhcCCeEEEEEcc
Confidence            4578999999999999999999999995 89999887532111  111  12356777888

>PRK07576 short chain dehydrogenase; Provisional

Probab=97.09  E-value=0.00086  Score=61.74  Aligned_cols=56  Identities=18%  Similarity=0.190  Sum_probs=41.3

Q ss_pred             ccCCeEEEEcCCChhHHHHHHHHHHcCCceEEEEecCCCCccc--cccc--CCCeEEEEcc
Q 017760            9 IEGKTFLVTGGLGHVGSALCLELVRRGAYQVRAFDLRTNSPWS--HLLI--NHGVHCIQGL   65 (366)
Q Consensus         9 ~~~~~VlITGgtGfiG~~L~~~L~~~g~~~V~~~dr~~~~~~~--~~~~--~~~v~~i~gD   65 (366)
                      +++++++||||+|.+|.+++++|.++|+ +|++++|++.....  ..+.  ..++.++.+|
T Consensus         7 ~~~k~ilItGasggIG~~la~~l~~~G~-~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~D   66 (264)
T PRK07576          7 FAGKNVVVVGGTSGINLGIAQAFARAGA-NVAVASRSQEKVDAAVAQLQQAGPEGLGVSAD   66 (264)
T ss_pred             CCCCEEEEECCCchHHHHHHHHHHHCCC-EEEEEeCCHHHHHHHHHHHHHhCCceEEEECC
Confidence            4568999999999999999999999994 89999987543211  1111  2345677777

>PRK05854 short chain dehydrogenase; Provisional

Probab=97.07  E-value=0.00067  Score=64.30  Aligned_cols=57  Identities=19%  Similarity=0.110  Sum_probs=43.2

Q ss_pred             cccCCeEEEEcCCChhHHHHHHHHHHcCCceEEEEecCCCCccc--ccc----cCCCeEEEEcc
Q 017760            8 GIEGKTFLVTGGLGHVGSALCLELVRRGAYQVRAFDLRTNSPWS--HLL----INHGVHCIQGL   65 (366)
Q Consensus         8 ~~~~~~VlITGgtGfiG~~L~~~L~~~g~~~V~~~dr~~~~~~~--~~~----~~~~v~~i~gD   65 (366)
                      .+++++++||||+|.||.++++.|.+.|+ +|++.+|+......  ..+    ....+.++++|
T Consensus        11 ~l~gk~~lITGas~GIG~~~a~~La~~G~-~Vil~~R~~~~~~~~~~~l~~~~~~~~v~~~~~D   73 (313)
T PRK05854         11 DLSGKRAVVTGASDGLGLGLARRLAAAGA-EVILPVRNRAKGEAAVAAIRTAVPDAKLSLRALD   73 (313)
T ss_pred             ccCCCEEEEeCCCChHHHHHHHHHHHCCC-EEEEEeCCHHHHHHHHHHHHHhCCCCceEEEEec
Confidence            35678999999999999999999999995 89999987543211  111    12357888998

>PRK07792 fabG 3-ketoacyl-(acyl-carrier-protein) reductase; Provisional

Probab=97.04  E-value=0.001  Score=62.84  Aligned_cols=57  Identities=28%  Similarity=0.317  Sum_probs=42.5

Q ss_pred             cccCCeEEEEcCCChhHHHHHHHHHHcCCceEEEEecCCCCccc---ccc--cCCCeEEEEcc
Q 017760            8 GIEGKTFLVTGGLGHVGSALCLELVRRGAYQVRAFDLRTNSPWS---HLL--INHGVHCIQGL   65 (366)
Q Consensus         8 ~~~~~~VlITGgtGfiG~~L~~~L~~~g~~~V~~~dr~~~~~~~---~~~--~~~~v~~i~gD   65 (366)
                      .+++++++||||+|.||.+++++|.++|+ +|++.+++......   ..+  ....+..+++|
T Consensus         9 ~l~~k~~lVTGas~gIG~~ia~~L~~~Ga-~Vv~~~~~~~~~~~~~~~~i~~~g~~~~~~~~D   70 (306)
T PRK07792          9 DLSGKVAVVTGAAAGLGRAEALGLARLGA-TVVVNDVASALDASDVLDEIRAAGAKAVAVAGD   70 (306)
T ss_pred             CCCCCEEEEECCCChHHHHHHHHHHHCCC-EEEEecCCchhHHHHHHHHHHhcCCeEEEEeCC
Confidence            35678999999999999999999999995 89999876432211   111  12457788888

>PRK09620 hypothetical protein; Provisional

Probab=97.02  E-value=0.0018  Score=58.58  Aligned_cols=35  Identities=34%  Similarity=0.546  Sum_probs=31.6

Q ss_pred             cCCeEEEEcCC----------------ChhHHHHHHHHHHcCCceEEEEecC
Q 017760           10 EGKTFLVTGGL----------------GHVGSALCLELVRRGAYQVRAFDLR   45 (366)
Q Consensus        10 ~~~~VlITGgt----------------GfiG~~L~~~L~~~g~~~V~~~dr~   45 (366)
                      .+++|+||+|.                ||+|++++++|+++|+ +|+.++..
T Consensus         2 ~gk~vlITaG~T~E~iD~VR~itN~SSGfiGs~LA~~L~~~Ga-~V~li~g~   52 (229)
T PRK09620          2 KGKKVLITSGGCLEKWDQVRGHTNMAKGTIGRIIAEELISKGA-HVIYLHGY   52 (229)
T ss_pred             CCCEEEEeCCCccCCcCCeeEecCCCcCHHHHHHHHHHHHCCC-eEEEEeCC
Confidence            57899999986                9999999999999995 89999864

>PRK08416 7-alpha-hydroxysteroid dehydrogenase; Provisional

Probab=96.97  E-value=0.001  Score=61.01  Aligned_cols=57  Identities=18%  Similarity=0.233  Sum_probs=41.3

Q ss_pred             cccCCeEEEEcCCChhHHHHHHHHHHcCCceEEEEecCCCCccc---ccc---cCCCeEEEEcc
Q 017760            8 GIEGKTFLVTGGLGHVGSALCLELVRRGAYQVRAFDLRTNSPWS---HLL---INHGVHCIQGL   65 (366)
Q Consensus         8 ~~~~~~VlITGgtGfiG~~L~~~L~~~g~~~V~~~dr~~~~~~~---~~~---~~~~v~~i~gD   65 (366)
                      .+++++++||||++.||.++++.|.+.|+ +|++.+++......   ..+   ...++.++.+|
T Consensus         5 ~l~~k~vlItGas~gIG~~ia~~l~~~G~-~v~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~D   67 (260)
T PRK08416          5 EMKGKTLVISGGTRGIGKAIVYEFAQSGV-NIAFTYNSNVEEANKIAEDLEQKYGIKAKAYPLN   67 (260)
T ss_pred             ccCCCEEEEeCCCchHHHHHHHHHHHCCC-EEEEEcCCCHHHHHHHHHHHHHhcCCceEEEEcC
Confidence            35678999999999999999999999995 89887665322110   111   12357788888

>PRK08261 fabG 3-ketoacyl-(acyl-carrier-protein) reductase; Provisional

Probab=96.93  E-value=0.0036  Score=62.38  Aligned_cols=37  Identities=38%  Similarity=0.580  Sum_probs=32.9

Q ss_pred             ccCCeEEEEcCCChhHHHHHHHHHHcCCceEEEEecCC
Q 017760            9 IEGKTFLVTGGLGHVGSALCLELVRRGAYQVRAFDLRT   46 (366)
Q Consensus         9 ~~~~~VlITGgtGfiG~~L~~~L~~~g~~~V~~~dr~~   46 (366)
                      .++++++||||+|.+|..+++.|.++|+ +|++++++.
T Consensus       208 ~~g~~vlItGasggIG~~la~~l~~~Ga-~vi~~~~~~  244 (450)
T PRK08261        208 LAGKVALVTGAARGIGAAIAEVLARDGA-HVVCLDVPA  244 (450)
T ss_pred             CCCCEEEEecCCCHHHHHHHHHHHHCCC-EEEEEeCCc
Confidence            3468999999999999999999999995 899998854

>PRK07424 bifunctional sterol desaturase/short chain dehydrogenase; Validated

Probab=96.92  E-value=0.0013  Score=64.58  Aligned_cols=38  Identities=42%  Similarity=0.620  Sum_probs=33.9

Q ss_pred             ccCCeEEEEcCCChhHHHHHHHHHHcCCceEEEEecCCC
Q 017760            9 IEGKTFLVTGGLGHVGSALCLELVRRGAYQVRAFDLRTN   47 (366)
Q Consensus         9 ~~~~~VlITGgtGfiG~~L~~~L~~~g~~~V~~~dr~~~   47 (366)
                      +++++++||||+|.+|+++++.|.++|. +|+++++++.
T Consensus       176 l~gK~VLITGASgGIG~aLA~~La~~G~-~Vi~l~r~~~  213 (406)
T PRK07424        176 LKGKTVAVTGASGTLGQALLKELHQQGA-KVVALTSNSD  213 (406)
T ss_pred             CCCCEEEEeCCCCHHHHHHHHHHHHCCC-EEEEEeCCHH
Confidence            4568999999999999999999999995 8999998753

>PRK09009 C factor cell-cell signaling protein; Provisional

Probab=96.90  E-value=0.0023  Score=57.57  Aligned_cols=50  Identities=22%  Similarity=0.255  Sum_probs=37.0

Q ss_pred             CeEEEEcCCChhHHHHHHHHHHcCC-ceEEEEecCCCCcccccccCCCeEEEEcc
Q 017760           12 KTFLVTGGLGHVGSALCLELVRRGA-YQVRAFDLRTNSPWSHLLINHGVHCIQGL   65 (366)
Q Consensus        12 ~~VlITGgtGfiG~~L~~~L~~~g~-~~V~~~dr~~~~~~~~~~~~~~v~~i~gD   65 (366)
                      |+|+||||+|+||++++++|.++|. ..|...+++....    ....++.++++|
T Consensus         1 ~~vlItGas~gIG~~ia~~l~~~~~~~~v~~~~~~~~~~----~~~~~~~~~~~D   51 (235)
T PRK09009          1 MNILIVGGSGGIGKAMVKQLLERYPDATVHATYRHHKPD----FQHDNVQWHALD   51 (235)
T ss_pred             CEEEEECCCChHHHHHHHHHHHhCCCCEEEEEccCCccc----cccCceEEEEec
Confidence            4899999999999999999999852 2566666544321    223567888888

>PRK08309 short chain dehydrogenase; Provisional

Probab=96.89  E-value=0.00099  Score=57.75  Aligned_cols=33  Identities=30%  Similarity=0.416  Sum_probs=29.1

Q ss_pred             CeEEEEcCCChhHHHHHHHHHHcCCceEEEEecCC
Q 017760           12 KTFLVTGGLGHVGSALCLELVRRGAYQVRAFDLRT   46 (366)
Q Consensus        12 ~~VlITGgtGfiG~~L~~~L~~~g~~~V~~~dr~~   46 (366)
                      |+++|||||||+|. +++.|.+.|+ +|++.+|++
T Consensus         1 m~vlVtGGtG~gg~-la~~L~~~G~-~V~v~~R~~   33 (177)
T PRK08309          1 MHALVIGGTGMLKR-VSLWLCEKGF-HVSVIARRE   33 (177)
T ss_pred             CEEEEECcCHHHHH-HHHHHHHCcC-EEEEEECCH
Confidence            47999999998876 9999999995 899998864

>PRK12747 short chain dehydrogenase; Provisional

Probab=96.89  E-value=0.0015  Score=59.51  Aligned_cols=36  Identities=33%  Similarity=0.409  Sum_probs=31.3

Q ss_pred             ccCCeEEEEcCCChhHHHHHHHHHHcCCceEEEEecC
Q 017760            9 IEGKTFLVTGGLGHVGSALCLELVRRGAYQVRAFDLR   45 (366)
Q Consensus         9 ~~~~~VlITGgtGfiG~~L~~~L~~~g~~~V~~~dr~   45 (366)
                      +++++++||||+|++|.++++.|.+.|+ +|++.+++
T Consensus         2 ~~~k~~lItGas~gIG~~ia~~l~~~G~-~v~~~~~~   37 (252)
T PRK12747          2 LKGKVALVTGASRGIGRAIAKRLANDGA-LVAIHYGN   37 (252)
T ss_pred             CCCCEEEEeCCCChHHHHHHHHHHHCCC-eEEEEcCC
Confidence            4568999999999999999999999995 88887543

>KOG4039 consensus Serine/threonine kinase TIP30/CC3 [Signal transduction mechanisms]

Probab=96.82  E-value=0.0031  Score=53.75  Aligned_cols=44  Identities=20%  Similarity=0.130  Sum_probs=37.0

Q ss_pred             ccccccCCeEEEEcCCChhHHHHHHHHHHcC-CceEEEEecCCCC
Q 017760            5 ENEGIEGKTFLVTGGLGHVGSALCLELVRRG-AYQVRAFDLRTNS   48 (366)
Q Consensus         5 ~~~~~~~~~VlITGgtGfiG~~L~~~L~~~g-~~~V~~~dr~~~~   48 (366)
                      |+-.|+++..+|.||||-.|+-+++++++.+ +.+|+++.|+.+.
T Consensus        12 EDf~mq~~s~fvlGAtG~~G~~llk~~~E~~~FSKV~~i~RR~~~   56 (238)
T KOG4039|consen   12 EDFRMQNMSGFVLGATGLCGGGLLKHAQEAPQFSKVYAILRRELP   56 (238)
T ss_pred             HHHhhhccceEEEeccccccHHHHHHHHhcccceeEEEEEeccCC
Confidence            3335778999999999999999999999987 4579999998543

>smart00822 PKS_KR This enzymatic domain is part of bacterial polyketide synthases and catalyses the first step in the reductive modification of the beta-carbonyl centres in the growing polyketide chain

Probab=96.81  E-value=0.0031  Score=53.22  Aligned_cols=36  Identities=36%  Similarity=0.529  Sum_probs=30.7

Q ss_pred             CeEEEEcCCChhHHHHHHHHHHcCCceEEEEecCCC
Q 017760           12 KTFLVTGGLGHVGSALCLELVRRGAYQVRAFDLRTN   47 (366)
Q Consensus        12 ~~VlITGgtGfiG~~L~~~L~~~g~~~V~~~dr~~~   47 (366)
                      ++++||||+|++|.++++.|.++|.+.|+.+++++.
T Consensus         1 ~~~li~Ga~~~iG~~~~~~l~~~g~~~v~~~~r~~~   36 (180)
T smart00822        1 GTYLITGGLGGLGLELARWLAERGARHLVLLSRSGP   36 (180)
T ss_pred             CEEEEEcCCChHHHHHHHHHHHhhCCeEEEEeCCCC
Confidence            478999999999999999999998546888877654

It uses NADPH to reduce the keto group to a hydroxy group.

>COG3967 DltE Short-chain dehydrogenase involved in D-alanine esterification of lipoteichoic acid and wall teichoic acid (D-alanine transfer protein) [Cell envelope biogenesis, outer membrane]

Probab=96.79  E-value=0.0012  Score=57.63  Aligned_cols=57  Identities=23%  Similarity=0.217  Sum_probs=43.0

Q ss_pred             cccCCeEEEEcCCChhHHHHHHHHHHcCCceEEEEecCCCCcccccccCCCeEEEEcc
Q 017760            8 GIEGKTFLVTGGLGHVGSALCLELVRRGAYQVRAFDLRTNSPWSHLLINHGVHCIQGL   65 (366)
Q Consensus         8 ~~~~~~VlITGgtGfiG~~L~~~L~~~g~~~V~~~dr~~~~~~~~~~~~~~v~~i~gD   65 (366)
                      .+.+.+||||||+.-||..|++++.+.|. +|++..|+...-.......+++....+|
T Consensus         2 k~tgnTiLITGG~sGIGl~lak~f~elgN-~VIi~gR~e~~L~e~~~~~p~~~t~v~D   58 (245)
T COG3967           2 KTTGNTILITGGASGIGLALAKRFLELGN-TVIICGRNEERLAEAKAENPEIHTEVCD   58 (245)
T ss_pred             cccCcEEEEeCCcchhhHHHHHHHHHhCC-EEEEecCcHHHHHHHHhcCcchheeeec
Confidence            35678999999999999999999999994 9999999864322222223556666666

>PRK07062 short chain dehydrogenase; Provisional

Probab=96.78  E-value=0.0019  Score=59.26  Aligned_cols=56  Identities=25%  Similarity=0.223  Sum_probs=41.7

Q ss_pred             ccCCeEEEEcCCChhHHHHHHHHHHcCCceEEEEecCCCCccc--cccc----CCCeEEEEcc
Q 017760            9 IEGKTFLVTGGLGHVGSALCLELVRRGAYQVRAFDLRTNSPWS--HLLI----NHGVHCIQGL   65 (366)
Q Consensus         9 ~~~~~VlITGgtGfiG~~L~~~L~~~g~~~V~~~dr~~~~~~~--~~~~----~~~v~~i~gD   65 (366)
                      +++++++||||+|.+|.++++.|.++|+ +|++++|++.....  ..+.    ..++..+.+|
T Consensus         6 l~~k~~lItGas~giG~~ia~~l~~~G~-~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~~D   67 (265)
T PRK07062          6 LEGRVAVVTGGSSGIGLATVELLLEAGA-SVAICGRDEERLASAEARLREKFPGARLLAARCD   67 (265)
T ss_pred             cCCCEEEEeCCCchHHHHHHHHHHHCCC-eEEEEeCCHHHHHHHHHHHHhhCCCceEEEEEec
Confidence            4568999999999999999999999995 89999997643211  1111    1256677777

>PRK06079 enoyl-(acyl carrier protein) reductase; Provisional

Probab=96.71  E-value=0.0023  Score=58.46  Aligned_cols=56  Identities=14%  Similarity=0.089  Sum_probs=41.6

Q ss_pred             ccCCeEEEEcCC--ChhHHHHHHHHHHcCCceEEEEecCCCCcc-cccccCCCeEEEEcc
Q 017760            9 IEGKTFLVTGGL--GHVGSALCLELVRRGAYQVRAFDLRTNSPW-SHLLINHGVHCIQGL   65 (366)
Q Consensus         9 ~~~~~VlITGgt--GfiG~~L~~~L~~~g~~~V~~~dr~~~~~~-~~~~~~~~v~~i~gD   65 (366)
                      +++++++||||+  +-||.+++++|.+.|+ +|++.+|+..... ..+.....+..+++|
T Consensus         5 l~~k~~lItGas~~~gIG~a~a~~la~~G~-~Vi~~~r~~~~~~~~~~~~~~~~~~~~~D   63 (252)
T PRK06079          5 LSGKKIVVMGVANKRSIAWGCAQAIKDQGA-TVIYTYQNDRMKKSLQKLVDEEDLLVECD   63 (252)
T ss_pred             cCCCEEEEeCCCCCCchHHHHHHHHHHCCC-EEEEecCchHHHHHHHhhccCceeEEeCC
Confidence            567899999999  7999999999999995 8999988632111 112223457788888

>PRK05872 short chain dehydrogenase; Provisional

Probab=96.71  E-value=0.0029  Score=59.40  Aligned_cols=38  Identities=34%  Similarity=0.552  Sum_probs=34.2

Q ss_pred             ccCCeEEEEcCCChhHHHHHHHHHHcCCceEEEEecCCC
Q 017760            9 IEGKTFLVTGGLGHVGSALCLELVRRGAYQVRAFDLRTN   47 (366)
Q Consensus         9 ~~~~~VlITGgtGfiG~~L~~~L~~~g~~~V~~~dr~~~   47 (366)
                      +++++++||||+|.+|.++++.|.+.|+ +|++++|+..
T Consensus         7 l~gk~vlItGas~gIG~~ia~~l~~~G~-~V~~~~r~~~   44 (296)
T PRK05872          7 LAGKVVVVTGAARGIGAELARRLHARGA-KLALVDLEEA   44 (296)
T ss_pred             CCCCEEEEECCCchHHHHHHHHHHHCCC-EEEEEeCCHH
Confidence            5678999999999999999999999995 8999998754

>PRK06125 short chain dehydrogenase; Provisional

Probab=96.70  E-value=0.0024  Score=58.41  Aligned_cols=56  Identities=18%  Similarity=0.172  Sum_probs=42.0

Q ss_pred             ccCCeEEEEcCCChhHHHHHHHHHHcCCceEEEEecCCCCccc--cccc---CCCeEEEEcc
Q 017760            9 IEGKTFLVTGGLGHVGSALCLELVRRGAYQVRAFDLRTNSPWS--HLLI---NHGVHCIQGL   65 (366)
Q Consensus         9 ~~~~~VlITGgtGfiG~~L~~~L~~~g~~~V~~~dr~~~~~~~--~~~~---~~~v~~i~gD   65 (366)
                      +++++++||||+|.+|.++++.|.+.|+ +|++++|++.....  ..+.   ..++.++.+|
T Consensus         5 ~~~k~vlItG~~~giG~~ia~~l~~~G~-~V~~~~r~~~~~~~~~~~l~~~~~~~~~~~~~D   65 (259)
T PRK06125          5 LAGKRVLITGASKGIGAAAAEAFAAEGC-HLHLVARDADALEALAADLRAAHGVDVAVHALD   65 (259)
T ss_pred             CCCCEEEEeCCCchHHHHHHHHHHHcCC-EEEEEeCCHHHHHHHHHHHHhhcCCceEEEEec
Confidence            4568999999999999999999999996 89999987542211  1111   2356777887

>PF00106 adh_short: short chain dehydrogenase alcohol dehydrogenase superfamily signature glucose/ribitol dehydrogenase family signature; InterPro: IPR002198 The short-chain dehydrogenases/reductases family (SDR) [] is a very large family of enzymes, most of which are known to be NAD- or NADP-dependent oxidoreductases

Probab=96.65  E-value=0.002  Score=54.52  Aligned_cols=73  Identities=25%  Similarity=0.160  Sum_probs=49.4

Q ss_pred             CeEEEEcCCChhHHHHHHHHHHcCCceEEEEecCCCCcccccc------cCCCeEEEEccc------------c-CCCCC
Q 017760           12 KTFLVTGGLGHVGSALCLELVRRGAYQVRAFDLRTNSPWSHLL------INHGVHCIQGLR------------K-NNRKC   72 (366)
Q Consensus        12 ~~VlITGgtGfiG~~L~~~L~~~g~~~V~~~dr~~~~~~~~~~------~~~~v~~i~gDk------------s-~~~~~   72 (366)
                      ++++||||+|-+|..++++|+++|.++|++++|+++.+....+      ...++.++++|-            . .....
T Consensus         1 k~~lItGa~~giG~~~a~~l~~~g~~~v~~~~r~~~~~~~~~l~~~l~~~~~~~~~~~~D~~~~~~~~~~~~~~~~~~~~   80 (167)
T PF00106_consen    1 KTVLITGASSGIGRALARALARRGARVVILTSRSEDSEGAQELIQELKAPGAKITFIECDLSDPESIRALIEEVIKRFGP   80 (167)
T ss_dssp             EEEEEETTTSHHHHHHHHHHHHTTTEEEEEEESSCHHHHHHHHHHHHHHTTSEEEEEESETTSHHHHHHHHHHHHHHHSS
T ss_pred             CEEEEECCCCHHHHHHHHHHHhcCceEEEEeeeccccccccccccccccccccccccccccccccccccccccccccccc
Confidence            4799999999999999999999975678888887111111111      136778888880            0 23345


Q ss_pred             ceEEEEeCCccc
Q 017760           73 LYTCAVRPAAIY   84 (366)
Q Consensus        73 l~~~ilRp~~iy   84 (366)
                      +++.+.-.+...
T Consensus        81 ld~li~~ag~~~   92 (167)
T PF00106_consen   81 LDILINNAGIFS   92 (167)
T ss_dssp             ESEEEEECSCTT
T ss_pred             cccccccccccc
Confidence            666666665544

As the first member of this family to be characterised was Drosophila alcohol dehydrogenase, this family used to be called [, , ] 'insect-type', or 'short-chain' alcohol dehydrogenases. Most member of this family are proteins of about 250 to 300 amino acid residues. Most dehydrogenases possess at least 2 domains [], the first binding the coenzyme, often NAD, and the second binding the substrate. This latter domain determines the substrate specificity and contains amino acids involved in catalysis. Little sequence similarity has been found in the coenzyme binding domain although there is a large degree of structural similarity, and it has therefore been suggested that the structure of dehydrogenases has arisen through gene fusion of a common ancestral coenzyme nucleotide sequence with various substrate specific domains [].; GO: 0016491 oxidoreductase activity, 0008152 metabolic process; PDB: 3QWI_D 3QWF_G 3IS3_A 3QWH_C 3ITD_A 3L77_A 1HDC_C 2HSD_C 3KVO_A 3KZV_A ....

>PRK05884 short chain dehydrogenase; Provisional

Probab=96.65  E-value=0.0027  Score=57.01  Aligned_cols=52  Identities=21%  Similarity=0.185  Sum_probs=38.7

Q ss_pred             CeEEEEcCCChhHHHHHHHHHHcCCceEEEEecCCCCcccccccCCCeEEEEcc
Q 017760           12 KTFLVTGGLGHVGSALCLELVRRGAYQVRAFDLRTNSPWSHLLINHGVHCIQGL   65 (366)
Q Consensus        12 ~~VlITGgtGfiG~~L~~~L~~~g~~~V~~~dr~~~~~~~~~~~~~~v~~i~gD   65 (366)
                      |+++||||+|.+|+++++.|.++|+ +|++++|+...... .....+++.+++|
T Consensus         1 m~vlItGas~giG~~ia~~l~~~g~-~v~~~~r~~~~~~~-~~~~~~~~~~~~D   52 (223)
T PRK05884          1 VEVLVTGGDTDLGRTIAEGFRNDGH-KVTLVGARRDDLEV-AAKELDVDAIVCD   52 (223)
T ss_pred             CeEEEEeCCchHHHHHHHHHHHCCC-EEEEEeCCHHHHHH-HHHhccCcEEecC
Confidence            3799999999999999999999995 89999887532110 0011245677888

>KOG1201 consensus Hydroxysteroid 17-beta dehydrogenase 11 [Secondary metabolites biosynthesis, transport and catabolism]

Probab=96.63  E-value=0.0041  Score=57.48  Aligned_cols=57  Identities=21%  Similarity=0.374  Sum_probs=44.4

Q ss_pred             cccCCeEEEEcCCChhHHHHHHHHHHcCCceEEEEecCCCCccc--ccccC-CCeEEEEcc
Q 017760            8 GIEGKTFLVTGGLGHVGSALCLELVRRGAYQVRAFDLRTNSPWS--HLLIN-HGVHCIQGL   65 (366)
Q Consensus         8 ~~~~~~VlITGgtGfiG~~L~~~L~~~g~~~V~~~dr~~~~~~~--~~~~~-~~v~~i~gD   65 (366)
                      ..+++.||||||++-+|+.++.+++++|. ++.+.|+++.....  +.... ..++...+|
T Consensus        35 ~v~g~~vLITGgg~GlGr~ialefa~rg~-~~vl~Din~~~~~etv~~~~~~g~~~~y~cd   94 (300)
T KOG1201|consen   35 SVSGEIVLITGGGSGLGRLIALEFAKRGA-KLVLWDINKQGNEETVKEIRKIGEAKAYTCD   94 (300)
T ss_pred             hccCCEEEEeCCCchHHHHHHHHHHHhCC-eEEEEeccccchHHHHHHHHhcCceeEEEec
Confidence            46688999999999999999999999996 89999998765432  11111 257788888

>TIGR01831 fabG_rel 3-oxoacyl-(acyl-carrier-protein) reductase, putative

Probab=96.62  E-value=0.0021  Score=57.97  Aligned_cols=51  Identities=20%  Similarity=0.146  Sum_probs=37.9

Q ss_pred             EEEEcCCChhHHHHHHHHHHcCCceEEEEecCCCCccc---ccc--cCCCeEEEEcc
Q 017760           14 FLVTGGLGHVGSALCLELVRRGAYQVRAFDLRTNSPWS---HLL--INHGVHCIQGL   65 (366)
Q Consensus        14 VlITGgtGfiG~~L~~~L~~~g~~~V~~~dr~~~~~~~---~~~--~~~~v~~i~gD   65 (366)
                      |+||||+|++|.++++.|.++|+ +|++++++......   ..+  .+.++.++++|
T Consensus         1 vlItGas~giG~~~a~~l~~~G~-~v~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~D   56 (239)
T TIGR01831         1 VLVTGASRGIGRAIANRLAADGF-EICVHYHSGRSDAESVVSAIQAQGGNARLLQFD   56 (239)
T ss_pred             CEEeCCCchHHHHHHHHHHHCCC-EEEEEeCCCHHHHHHHHHHHHHcCCeEEEEEcc
Confidence            58999999999999999999995 89998876432211   111  13457888888

This model represents a small, very well conserved family of proteins closely related to the FabG family, TIGR01830, and possibly equal in function. In all completed genomes with a member of this family, a FabG in TIGR01830 is also found.

>PRK05855 short chain dehydrogenase; Validated

Probab=96.55  E-value=0.0026  Score=65.03  Aligned_cols=57  Identities=26%  Similarity=0.327  Sum_probs=43.1

Q ss_pred             cccCCeEEEEcCCChhHHHHHHHHHHcCCceEEEEecCCCCccc--ccc--cCCCeEEEEcc
Q 017760            8 GIEGKTFLVTGGLGHVGSALCLELVRRGAYQVRAFDLRTNSPWS--HLL--INHGVHCIQGL   65 (366)
Q Consensus         8 ~~~~~~VlITGgtGfiG~~L~~~L~~~g~~~V~~~dr~~~~~~~--~~~--~~~~v~~i~gD   65 (366)
                      .+..++++||||+|+||++++++|.++|+ +|++++|+......  ...  ...++.++.+|
T Consensus       312 ~~~~~~~lv~G~s~giG~~~a~~l~~~G~-~v~~~~r~~~~~~~~~~~~~~~~~~~~~~~~D  372 (582)
T PRK05855        312 PFSGKLVVVTGAGSGIGRETALAFAREGA-EVVASDIDEAAAERTAELIRAAGAVAHAYRVD  372 (582)
T ss_pred             cCCCCEEEEECCcCHHHHHHHHHHHHCCC-EEEEEeCCHHHHHHHHHHHHhcCCeEEEEEcC
Confidence            35568999999999999999999999995 89999987543211  111  12457888888

>PRK08340 glucose-1-dehydrogenase; Provisional

Probab=96.52  E-value=0.0032  Score=57.64  Aligned_cols=53  Identities=21%  Similarity=0.178  Sum_probs=39.7

Q ss_pred             CeEEEEcCCChhHHHHHHHHHHcCCceEEEEecCCCCccc--cccc-CCCeEEEEcc
Q 017760           12 KTFLVTGGLGHVGSALCLELVRRGAYQVRAFDLRTNSPWS--HLLI-NHGVHCIQGL   65 (366)
Q Consensus        12 ~~VlITGgtGfiG~~L~~~L~~~g~~~V~~~dr~~~~~~~--~~~~-~~~v~~i~gD   65 (366)
                      |+++||||+|.+|+++++.|.++|+ +|++++|++.....  ..+. ..++.++++|
T Consensus         1 m~vlItGas~gIG~aia~~l~~~G~-~V~~~~r~~~~~~~~~~~l~~~~~~~~~~~D   56 (259)
T PRK08340          1 MNVLVTASSRGIGFNVARELLKKGA-RVVISSRNEENLEKALKELKEYGEVYAVKAD   56 (259)
T ss_pred             CeEEEEcCCcHHHHHHHHHHHHcCC-EEEEEeCCHHHHHHHHHHHHhcCCceEEEcC
Confidence            4899999999999999999999995 89999987532111  1111 1356778888

>TIGR02685 pter_reduc_Leis pteridine reductase

Probab=96.52  E-value=0.0039  Score=57.37  Aligned_cols=34  Identities=26%  Similarity=0.396  Sum_probs=30.3

Q ss_pred             CeEEEEcCCChhHHHHHHHHHHcCCceEEEEecCC
Q 017760           12 KTFLVTGGLGHVGSALCLELVRRGAYQVRAFDLRT   46 (366)
Q Consensus        12 ~~VlITGgtGfiG~~L~~~L~~~g~~~V~~~dr~~   46 (366)
                      ++++||||+|.||.++++.|.++|+ +|++++++.
T Consensus         2 ~~~lITGas~gIG~~~a~~l~~~G~-~V~~~~~~~   35 (267)
T TIGR02685         2 PAAVVTGAAKRIGSSIAVALHQEGY-RVVLHYHRS   35 (267)
T ss_pred             CEEEEeCCCCcHHHHHHHHHHhCCC-eEEEEcCCc
Confidence            4789999999999999999999995 899887654

Pteridine reductase is an enzyme used by trypanosomatids (including Trypanosoma cruzi and Leishmania major) to obtain reduced pteridines by salvage rather than biosynthetic pathways. Enzymes in T. cruzi described as pteridine reductase 1 (PTR1) and pteridine reductase 2 (PTR2) have different activity profiles. PTR1 is more active with with fully oxidized biopterin and folate than with reduced forms, while PTR2 reduces dihydrobiopterin and dihydrofolate but not oxidized pteridines. T. cruzi PTR1 and PTR2 are more similar to each other in sequence than either is to the pteridine reductase of Leishmania major, and all are included in this family.

>PLN02780 ketoreductase/ oxidoreductase

Probab=96.51  E-value=0.004  Score=59.24  Aligned_cols=37  Identities=24%  Similarity=0.392  Sum_probs=33.7

Q ss_pred             cCCeEEEEcCCChhHHHHHHHHHHcCCceEEEEecCCC
Q 017760           10 EGKTFLVTGGLGHVGSALCLELVRRGAYQVRAFDLRTN   47 (366)
Q Consensus        10 ~~~~VlITGgtGfiG~~L~~~L~~~g~~~V~~~dr~~~   47 (366)
                      .++.++||||||.||.+++++|.++|+ +|++++|++.
T Consensus        52 ~g~~~lITGAs~GIG~alA~~La~~G~-~Vil~~R~~~   88 (320)
T PLN02780         52 YGSWALVTGPTDGIGKGFAFQLARKGL-NLVLVARNPD   88 (320)
T ss_pred             cCCEEEEeCCCcHHHHHHHHHHHHCCC-CEEEEECCHH
Confidence            468999999999999999999999995 8999999864

>PRK07832 short chain dehydrogenase; Provisional

Probab=96.49  E-value=0.0036  Score=57.82  Aligned_cols=34  Identities=32%  Similarity=0.434  Sum_probs=31.0

Q ss_pred             CeEEEEcCCChhHHHHHHHHHHcCCceEEEEecCC
Q 017760           12 KTFLVTGGLGHVGSALCLELVRRGAYQVRAFDLRT   46 (366)
Q Consensus        12 ~~VlITGgtGfiG~~L~~~L~~~g~~~V~~~dr~~   46 (366)
                      ++++||||+|.+|.++++.|.++|+ +|++++++.
T Consensus         1 k~vlItGas~giG~~la~~la~~G~-~vv~~~r~~   34 (272)
T PRK07832          1 KRCFVTGAASGIGRATALRLAAQGA-ELFLTDRDA   34 (272)
T ss_pred             CEEEEeCCCCHHHHHHHHHHHHCCC-EEEEEeCCH
Confidence            4799999999999999999999995 899998865

>PRK06720 hypothetical protein; Provisional

Probab=96.45  E-value=0.0061  Score=52.41  Aligned_cols=38  Identities=34%  Similarity=0.503  Sum_probs=33.8

Q ss_pred             ccCCeEEEEcCCChhHHHHHHHHHHcCCceEEEEecCCC
Q 017760            9 IEGKTFLVTGGLGHVGSALCLELVRRGAYQVRAFDLRTN   47 (366)
Q Consensus         9 ~~~~~VlITGgtGfiG~~L~~~L~~~g~~~V~~~dr~~~   47 (366)
                      +++++++||||+|.+|.++++.|.+.|+ +|.+.+++.+
T Consensus        14 l~gk~~lVTGa~~GIG~aia~~l~~~G~-~V~l~~r~~~   51 (169)
T PRK06720         14 LAGKVAIVTGGGIGIGRNTALLLAKQGA-KVIVTDIDQE   51 (169)
T ss_pred             cCCCEEEEecCCChHHHHHHHHHHHCCC-EEEEEECCHH
Confidence            4568899999999999999999999995 8999998753

>PRK07201 short chain dehydrogenase; Provisional

Probab=96.36  E-value=0.0033  Score=65.63  Aligned_cols=56  Identities=20%  Similarity=0.214  Sum_probs=42.5

Q ss_pred             ccCCeEEEEcCCChhHHHHHHHHHHcCCceEEEEecCCCCccc--ccc--cCCCeEEEEcc
Q 017760            9 IEGKTFLVTGGLGHVGSALCLELVRRGAYQVRAFDLRTNSPWS--HLL--INHGVHCIQGL   65 (366)
Q Consensus         9 ~~~~~VlITGgtGfiG~~L~~~L~~~g~~~V~~~dr~~~~~~~--~~~--~~~~v~~i~gD   65 (366)
                      +++++++||||+|.+|.++++.|.++|+ +|++++|++.....  ..+  ...++.++++|
T Consensus       369 ~~~k~vlItGas~giG~~la~~l~~~G~-~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~D  428 (657)
T PRK07201        369 LVGKVVLITGASSGIGRATAIKVAEAGA-TVFLVARNGEALDELVAEIRAKGGTAHAYTCD  428 (657)
T ss_pred             CCCCEEEEeCCCCHHHHHHHHHHHHCCC-EEEEEECCHHHHHHHHHHHHhcCCcEEEEEec
Confidence            4568999999999999999999999995 89999987543211  111  12457788888

>PRK07791 short chain dehydrogenase; Provisional

Probab=96.36  E-value=0.0061  Score=56.92  Aligned_cols=37  Identities=32%  Similarity=0.571  Sum_probs=33.3

Q ss_pred             ccCCeEEEEcCCChhHHHHHHHHHHcCCceEEEEecCC
Q 017760            9 IEGKTFLVTGGLGHVGSALCLELVRRGAYQVRAFDLRT   46 (366)
Q Consensus         9 ~~~~~VlITGgtGfiG~~L~~~L~~~g~~~V~~~dr~~   46 (366)
                      +++++++||||++.||.++++.|.+.|+ +|++++++.
T Consensus         4 l~~k~~lITGas~GIG~aia~~la~~G~-~vii~~~~~   40 (286)
T PRK07791          4 LDGRVVIVTGAGGGIGRAHALAFAAEGA-RVVVNDIGV   40 (286)
T ss_pred             cCCCEEEEECCCchHHHHHHHHHHHCCC-EEEEeeCCc
Confidence            4568999999999999999999999995 899998765

>PRK07889 enoyl-(acyl carrier protein) reductase; Provisional

Probab=96.33  E-value=0.0048  Score=56.53  Aligned_cols=56  Identities=18%  Similarity=0.167  Sum_probs=41.1

Q ss_pred             ccCCeEEEEcC--CChhHHHHHHHHHHcCCceEEEEecCCCCcccccc---cCCCeEEEEcc
Q 017760            9 IEGKTFLVTGG--LGHVGSALCLELVRRGAYQVRAFDLRTNSPWSHLL---INHGVHCIQGL   65 (366)
Q Consensus         9 ~~~~~VlITGg--tGfiG~~L~~~L~~~g~~~V~~~dr~~~~~~~~~~---~~~~v~~i~gD   65 (366)
                      +++++++||||  ++-||.++++.|.+.|+ +|++.+|+.........   ....+.++++|
T Consensus         5 ~~~k~~lItGa~~s~GIG~a~a~~la~~G~-~v~l~~r~~~~~~~~~~~~~~~~~~~~~~~D   65 (256)
T PRK07889          5 LEGKRILVTGVITDSSIAFHVARVAQEQGA-EVVLTGFGRALRLTERIAKRLPEPAPVLELD   65 (256)
T ss_pred             ccCCEEEEeCCCCcchHHHHHHHHHHHCCC-EEEEecCccchhHHHHHHHhcCCCCcEEeCC
Confidence            45689999999  89999999999999995 89999876422211111   12356778888

>PRK08303 short chain dehydrogenase; Provisional

Probab=96.24  E-value=0.0078  Score=56.86  Aligned_cols=37  Identities=32%  Similarity=0.416  Sum_probs=33.7

Q ss_pred             ccCCeEEEEcCCChhHHHHHHHHHHcCCceEEEEecCC
Q 017760            9 IEGKTFLVTGGLGHVGSALCLELVRRGAYQVRAFDLRT   46 (366)
Q Consensus         9 ~~~~~VlITGgtGfiG~~L~~~L~~~g~~~V~~~dr~~   46 (366)
                      +++++++||||++-||.++++.|++.|+ +|++.+|+.
T Consensus         6 l~~k~~lITGgs~GIG~aia~~la~~G~-~Vv~~~r~~   42 (305)
T PRK08303          6 LRGKVALVAGATRGAGRGIAVELGAAGA-TVYVTGRST   42 (305)
T ss_pred             CCCCEEEEeCCCchHHHHHHHHHHHCCC-EEEEEeccc
Confidence            4578999999999999999999999996 899999874

>KOG1205 consensus Predicted dehydrogenase [Secondary metabolites biosynthesis, transport and catabolism]

Probab=96.20  E-value=0.0065  Score=56.29  Aligned_cols=78  Identities=23%  Similarity=0.206  Sum_probs=52.9

Q ss_pred             cccccCCeEEEEcCCChhHHHHHHHHHHcCCceEEEEecCCCCccc-----ccccCC-CeEEEEcc----cc--------
Q 017760            6 NEGIEGKTFLVTGGLGHVGSALCLELVRRGAYQVRAFDLRTNSPWS-----HLLINH-GVHCIQGL----RK--------   67 (366)
Q Consensus         6 ~~~~~~~~VlITGgtGfiG~~L~~~L~~~g~~~V~~~dr~~~~~~~-----~~~~~~-~v~~i~gD----ks--------   67 (366)
                      ++.+.++.|+|||||.-||.+++.+|.++|. +++.+.++......     .+..+. ++..+++|    ++        
T Consensus         7 ~e~~~~kvVvITGASsGIG~~lA~~la~~G~-~l~lvar~~rrl~~v~~~l~~~~~~~~v~~~~~Dvs~~~~~~~~~~~~   85 (282)
T KOG1205|consen    7 MERLAGKVVLITGASSGIGEALAYELAKRGA-KLVLVARRARRLERVAEELRKLGSLEKVLVLQLDVSDEESVKKFVEWA   85 (282)
T ss_pred             HHHhCCCEEEEeCCCcHHHHHHHHHHHhCCC-ceEEeehhhhhHHHHHHHHHHhCCcCccEEEeCccCCHHHHHHHHHHH
Confidence            4557789999999999999999999999996 67777666433211     112223 47888888    11        


Q ss_pred             -CCCCCceEEEEeCCccc
Q 017760           68 -NNRKCLYTCAVRPAAIY   84 (366)
Q Consensus        68 -~~~~~l~~~ilRp~~iy   84 (366)
                       ..-+++++.+=.-|...
T Consensus        86 ~~~fg~vDvLVNNAG~~~  103 (282)
T KOG1205|consen   86 IRHFGRVDVLVNNAGISL  103 (282)
T ss_pred             HHhcCCCCEEEecCcccc
Confidence             34456666666655544

>KOG1200 consensus Mitochondrial/plastidial beta-ketoacyl-ACP reductase [Lipid transport and metabolism]

Probab=96.18  E-value=0.018  Score=50.02  Aligned_cols=40  Identities=33%  Similarity=0.495  Sum_probs=34.3

Q ss_pred             ccCCeEEEEcCCChhHHHHHHHHHHcCCceEEEEecCCCCc
Q 017760            9 IEGKTFLVTGGLGHVGSALCLELVRRGAYQVRAFDLRTNSP   49 (366)
Q Consensus         9 ~~~~~VlITGgtGfiG~~L~~~L~~~g~~~V~~~dr~~~~~   49 (366)
                      .+.+..+||||+.-||++++..|.+.|+ +|...|++....
T Consensus        12 ~~sk~~~vtGg~sGIGrAia~~la~~Ga-rv~v~dl~~~~A   51 (256)
T KOG1200|consen   12 LMSKVAAVTGGSSGIGRAIAQLLAKKGA-RVAVADLDSAAA   51 (256)
T ss_pred             HhcceeEEecCCchHHHHHHHHHHhcCc-EEEEeecchhhH
Confidence            3456789999999999999999999996 899999886543

>PRK14982 acyl-ACP reductase; Provisional

Probab=96.17  E-value=0.007  Score=57.75  Aligned_cols=38  Identities=26%  Similarity=0.414  Sum_probs=32.3

Q ss_pred             ccCCeEEEEcCCChhHHHHHHHHHHc-CCceEEEEecCC
Q 017760            9 IEGKTFLVTGGLGHVGSALCLELVRR-GAYQVRAFDLRT   46 (366)
Q Consensus         9 ~~~~~VlITGgtGfiG~~L~~~L~~~-g~~~V~~~dr~~   46 (366)
                      .++++|+||||+|++|+.+++.|.++ |.++++.++|+.
T Consensus       153 l~~k~VLVtGAtG~IGs~lar~L~~~~gv~~lilv~R~~  191 (340)
T PRK14982        153 LSKATVAVVGATGDIGSAVCRWLDAKTGVAELLLVARQQ  191 (340)
T ss_pred             cCCCEEEEEccChHHHHHHHHHHHhhCCCCEEEEEcCCH
Confidence            56789999999999999999999864 555899888764

>PRK06732 phosphopantothenate--cysteine ligase; Validated

Probab=96.07  E-value=0.014  Score=52.67  Aligned_cols=28  Identities=18%  Similarity=0.355  Sum_probs=24.6

Q ss_pred             cCCChhHHHHHHHHHHcCCceEEEEecCC
Q 017760           18 GGLGHVGSALCLELVRRGAYQVRAFDLRT   46 (366)
Q Consensus        18 GgtGfiG~~L~~~L~~~g~~~V~~~dr~~   46 (366)
                      .+||++|+++++.|+++|+ +|++++++.
T Consensus        23 ~SSG~iG~aLA~~L~~~G~-~V~li~r~~   50 (229)
T PRK06732         23 HSTGQLGKIIAETFLAAGH-EVTLVTTKT   50 (229)
T ss_pred             ccchHHHHHHHHHHHhCCC-EEEEEECcc
Confidence            4589999999999999995 999998754

>PRK08594 enoyl-(acyl carrier protein) reductase; Provisional

Probab=96.05  E-value=0.015  Score=53.24  Aligned_cols=56  Identities=18%  Similarity=0.111  Sum_probs=40.5

Q ss_pred             ccCCeEEEEcCC--ChhHHHHHHHHHHcCCceEEEEecCCCCc-ccccc----cCCCeEEEEcc
Q 017760            9 IEGKTFLVTGGL--GHVGSALCLELVRRGAYQVRAFDLRTNSP-WSHLL----INHGVHCIQGL   65 (366)
Q Consensus         9 ~~~~~VlITGgt--GfiG~~L~~~L~~~g~~~V~~~dr~~~~~-~~~~~----~~~~v~~i~gD   65 (366)
                      +++++++||||+  +-||.++++.|.+.|+ +|++.+|+.... ....+    ...++..+++|
T Consensus         5 ~~~k~~lItGa~~s~GIG~aia~~la~~G~-~v~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~D   67 (257)
T PRK08594          5 LEGKTYVVMGVANKRSIAWGIARSLHNAGA-KLVFTYAGERLEKEVRELADTLEGQESLLLPCD   67 (257)
T ss_pred             cCCCEEEEECCCCCCCHHHHHHHHHHHCCC-EEEEecCcccchHHHHHHHHHcCCCceEEEecC
Confidence            456899999997  8999999999999996 899988753211 11111    12456778888

>PRK07984 enoyl-(acyl carrier protein) reductase; Provisional

Probab=96.01  E-value=0.01  Score=54.70  Aligned_cols=56  Identities=16%  Similarity=0.125  Sum_probs=39.8

Q ss_pred             ccCCeEEEEcCCC--hhHHHHHHHHHHcCCceEEEEecCCCCc-cccccc--CCCeEEEEcc
Q 017760            9 IEGKTFLVTGGLG--HVGSALCLELVRRGAYQVRAFDLRTNSP-WSHLLI--NHGVHCIQGL   65 (366)
Q Consensus         9 ~~~~~VlITGgtG--fiG~~L~~~L~~~g~~~V~~~dr~~~~~-~~~~~~--~~~v~~i~gD   65 (366)
                      +++++++||||++  -||.++++.|.+.|+ +|++.+++.... ...++.  .+.+..+.+|
T Consensus         4 l~~k~~lITGas~~~GIG~aia~~la~~G~-~vil~~r~~~~~~~~~~~~~~~~~~~~~~~D   64 (262)
T PRK07984          4 LSGKRILVTGVASKLSIAYGIAQAMHREGA-ELAFTYQNDKLKGRVEEFAAQLGSDIVLPCD   64 (262)
T ss_pred             cCCCEEEEeCCCCCccHHHHHHHHHHHCCC-EEEEEecchhHHHHHHHHHhccCCceEeecC
Confidence            5668999999985  899999999999995 899888763111 111111  1345677888

>PRK08862 short chain dehydrogenase; Provisional

Probab=95.95  E-value=0.011  Score=53.17  Aligned_cols=38  Identities=21%  Similarity=0.316  Sum_probs=34.1

Q ss_pred             ccCCeEEEEcCCChhHHHHHHHHHHcCCceEEEEecCCC
Q 017760            9 IEGKTFLVTGGLGHVGSALCLELVRRGAYQVRAFDLRTN   47 (366)
Q Consensus         9 ~~~~~VlITGgtGfiG~~L~~~L~~~g~~~V~~~dr~~~   47 (366)
                      +++++++||||++-+|.++++.|.++|. +|++.+|+..
T Consensus         3 ~~~k~~lVtGas~GIG~aia~~la~~G~-~V~~~~r~~~   40 (227)
T PRK08862          3 IKSSIILITSAGSVLGRTISCHFARLGA-TLILCDQDQS   40 (227)
T ss_pred             CCCeEEEEECCccHHHHHHHHHHHHCCC-EEEEEcCCHH
Confidence            4568999999999999999999999995 8999988764

>PRK06484 short chain dehydrogenase; Validated

Probab=95.92  E-value=0.0099  Score=60.29  Aligned_cols=55  Identities=25%  Similarity=0.357  Sum_probs=41.5

Q ss_pred             cCCeEEEEcCCChhHHHHHHHHHHcCCceEEEEecCCCCccc-ccccCCCeEEEEcc
Q 017760           10 EGKTFLVTGGLGHVGSALCLELVRRGAYQVRAFDLRTNSPWS-HLLINHGVHCIQGL   65 (366)
Q Consensus        10 ~~~~VlITGgtGfiG~~L~~~L~~~g~~~V~~~dr~~~~~~~-~~~~~~~v~~i~gD   65 (366)
                      ++++++||||++.||.++++.|.++|+ +|++++|+...... ......++.++++|
T Consensus         4 ~~k~~lITGas~gIG~aia~~l~~~G~-~V~~~~r~~~~~~~~~~~~~~~~~~~~~D   59 (520)
T PRK06484          4 QSRVVLVTGAAGGIGRAACQRFARAGD-QVVVADRNVERARERADSLGPDHHALAMD   59 (520)
T ss_pred             CCeEEEEECCCcHHHHHHHHHHHHCCC-EEEEEeCCHHHHHHHHHHhCCceeEEEec
Confidence            468999999999999999999999995 89999987543211 11112456778888

>PRK07578 short chain dehydrogenase; Provisional

Probab=95.85  E-value=0.013  Score=51.40  Aligned_cols=33  Identities=30%  Similarity=0.442  Sum_probs=29.7

Q ss_pred             CeEEEEcCCChhHHHHHHHHHHcCCceEEEEecCC
Q 017760           12 KTFLVTGGLGHVGSALCLELVRRGAYQVRAFDLRT   46 (366)
Q Consensus        12 ~~VlITGgtGfiG~~L~~~L~~~g~~~V~~~dr~~   46 (366)
                      |+++||||+|.+|.++++.|.++ + +|++++|++
T Consensus         1 ~~vlItGas~giG~~la~~l~~~-~-~vi~~~r~~   33 (199)
T PRK07578          1 MKILVIGASGTIGRAVVAELSKR-H-EVITAGRSS   33 (199)
T ss_pred             CeEEEEcCCcHHHHHHHHHHHhc-C-cEEEEecCC
Confidence            47999999999999999999988 5 899998864

>PRK06505 enoyl-(acyl carrier protein) reductase; Provisional

Probab=95.84  E-value=0.013  Score=54.19  Aligned_cols=37  Identities=19%  Similarity=0.254  Sum_probs=32.7

Q ss_pred             ccCCeEEEEcCCC--hhHHHHHHHHHHcCCceEEEEecCC
Q 017760            9 IEGKTFLVTGGLG--HVGSALCLELVRRGAYQVRAFDLRT   46 (366)
Q Consensus         9 ~~~~~VlITGgtG--fiG~~L~~~L~~~g~~~V~~~dr~~   46 (366)
                      +++++++||||++  -||.++++.|.+.|+ +|++.+|+.
T Consensus         5 l~~k~~lVTGas~~~GIG~aiA~~la~~Ga-~V~~~~r~~   43 (271)
T PRK06505          5 MQGKRGLIMGVANDHSIAWGIAKQLAAQGA-ELAFTYQGE   43 (271)
T ss_pred             cCCCEEEEeCCCCCCcHHHHHHHHHHhCCC-EEEEecCch
Confidence            5568899999997  899999999999995 899988764

>PRK07533 enoyl-(acyl carrier protein) reductase; Provisional

Probab=95.78  E-value=0.019  Score=52.64  Aligned_cols=38  Identities=21%  Similarity=0.188  Sum_probs=33.2

Q ss_pred             ccCCeEEEEcCC--ChhHHHHHHHHHHcCCceEEEEecCCC
Q 017760            9 IEGKTFLVTGGL--GHVGSALCLELVRRGAYQVRAFDLRTN   47 (366)
Q Consensus         9 ~~~~~VlITGgt--GfiG~~L~~~L~~~g~~~V~~~dr~~~   47 (366)
                      +++++++||||+  +-||.++++.|++.|+ +|++.+|+..
T Consensus         8 ~~~k~~lItGas~g~GIG~a~a~~la~~G~-~v~l~~r~~~   47 (258)
T PRK07533          8 LAGKRGLVVGIANEQSIAWGCARAFRALGA-ELAVTYLNDK   47 (258)
T ss_pred             cCCCEEEEECCCCCCcHHHHHHHHHHHcCC-EEEEEeCChh
Confidence            567899999998  5899999999999995 8999988753

>PRK12859 3-ketoacyl-(acyl-carrier-protein) reductase; Provisional

Probab=95.72  E-value=0.018  Score=52.67  Aligned_cols=35  Identities=31%  Similarity=0.444  Sum_probs=30.6

Q ss_pred             ccCCeEEEEcCCC--hhHHHHHHHHHHcCCceEEEEec
Q 017760            9 IEGKTFLVTGGLG--HVGSALCLELVRRGAYQVRAFDL   44 (366)
Q Consensus         9 ~~~~~VlITGgtG--fiG~~L~~~L~~~g~~~V~~~dr   44 (366)
                      .++++++||||+|  .+|.+++++|+++|+ +|++.++
T Consensus         4 l~~k~vlVtGas~~~giG~~~a~~l~~~G~-~vi~~~~   40 (256)
T PRK12859          4 LKNKVAVVTGVSRLDGIGAAICKELAEAGA-DIFFTYW   40 (256)
T ss_pred             cCCcEEEEECCCCCCChHHHHHHHHHHCCC-eEEEEec
Confidence            4568999999995  799999999999995 8988764

>PRK08415 enoyl-(acyl carrier protein) reductase; Provisional

Probab=95.68  E-value=0.018  Score=53.38  Aligned_cols=37  Identities=19%  Similarity=0.263  Sum_probs=32.6

Q ss_pred             ccCCeEEEEcCC--ChhHHHHHHHHHHcCCceEEEEecCC
Q 017760            9 IEGKTFLVTGGL--GHVGSALCLELVRRGAYQVRAFDLRT   46 (366)
Q Consensus         9 ~~~~~VlITGgt--GfiG~~L~~~L~~~g~~~V~~~dr~~   46 (366)
                      +++++++||||+  +-||.++++.|.+.|+ +|++.+|+.
T Consensus         3 l~~k~~lItGas~~~GIG~aiA~~la~~G~-~Vil~~r~~   41 (274)
T PRK08415          3 MKGKKGLIVGVANNKSIAYGIAKACFEQGA-ELAFTYLNE   41 (274)
T ss_pred             cCCcEEEEECCCCCCCHHHHHHHHHHHCCC-EEEEEecCH
Confidence            456899999997  7899999999999996 899998874

>TIGR01289 LPOR light-dependent protochlorophyllide reductase

Probab=95.66  E-value=0.018  Score=54.58  Aligned_cols=71  Identities=14%  Similarity=0.011  Sum_probs=48.7

Q ss_pred             CCeEEEEcCCChhHHHHHHHHHHcC-CceEEEEecCCCCccc--ccc--cCCCeEEEEcc------------cc-CCCCC
Q 017760           11 GKTFLVTGGLGHVGSALCLELVRRG-AYQVRAFDLRTNSPWS--HLL--INHGVHCIQGL------------RK-NNRKC   72 (366)
Q Consensus        11 ~~~VlITGgtGfiG~~L~~~L~~~g-~~~V~~~dr~~~~~~~--~~~--~~~~v~~i~gD------------ks-~~~~~   72 (366)
                      +++++||||++.||.++++.|.++| + +|++++|+......  ..+  ....+.++.+|            +. ....+
T Consensus         3 ~k~vlITGas~GIG~aia~~L~~~G~~-~V~l~~r~~~~~~~~~~~l~~~~~~~~~~~~Dl~~~~~v~~~~~~~~~~~~~   81 (314)
T TIGR01289         3 KPTVIITGASSGLGLYAAKALAATGEW-HVIMACRDFLKAEQAAKSLGMPKDSYTIMHLDLGSLDSVRQFVQQFRESGRP   81 (314)
T ss_pred             CCEEEEECCCChHHHHHHHHHHHcCCC-EEEEEeCCHHHHHHHHHHhcCCCCeEEEEEcCCCCHHHHHHHHHHHHHhCCC
Confidence            5689999999999999999999999 6 89999887532210  111  12356778888            00 12345


Q ss_pred             ceEEEEeCCc
Q 017760           73 LYTCAVRPAA   82 (366)
Q Consensus        73 l~~~ilRp~~   82 (366)
                      ++..+...+.
T Consensus        82 iD~lI~nAG~   91 (314)
T TIGR01289        82 LDALVCNAAV   91 (314)
T ss_pred             CCEEEECCCc
Confidence            7777766553

This model represents the light-dependent, NADPH-dependent form of protochlorophyllide reductase. It belongs to the short chain alcohol dehydrogenase family, in contrast to the nitrogenase-related light-independent form.

>PRK08690 enoyl-(acyl carrier protein) reductase; Provisional

Probab=95.61  E-value=0.019  Score=52.66  Aligned_cols=37  Identities=19%  Similarity=0.228  Sum_probs=31.7

Q ss_pred             cccCCeEEEEcC--CChhHHHHHHHHHHcCCceEEEEecC
Q 017760            8 GIEGKTFLVTGG--LGHVGSALCLELVRRGAYQVRAFDLR   45 (366)
Q Consensus         8 ~~~~~~VlITGg--tGfiG~~L~~~L~~~g~~~V~~~dr~   45 (366)
                      .+++++++||||  ++-||.++++.|.+.|+ +|++.+++
T Consensus         3 ~~~~k~~lITGa~~~~GIG~a~a~~l~~~G~-~v~~~~~~   41 (261)
T PRK08690          3 FLQGKKILITGMISERSIAYGIAKACREQGA-ELAFTYVV   41 (261)
T ss_pred             ccCCcEEEEECCCCCCcHHHHHHHHHHHCCC-EEEEEcCc
Confidence            356789999997  67999999999999996 89888765

>PF08659 KR: KR domain; InterPro: IPR013968 This domain is found in bacterial polyketide synthases that catalyse the first step in the reductive modification of the beta-carbonyl centres in the growing polyketide chain

Probab=95.59  E-value=0.025  Score=49.06  Aligned_cols=33  Identities=39%  Similarity=0.638  Sum_probs=30.2

Q ss_pred             eEEEEcCCChhHHHHHHHHHHcCCceEEEEecC
Q 017760           13 TFLVTGGLGHVGSALCLELVRRGAYQVRAFDLR   45 (366)
Q Consensus        13 ~VlITGgtGfiG~~L~~~L~~~g~~~V~~~dr~   45 (366)
                      +++||||+|-+|..+++.|.+++..+|+.+.|+
T Consensus         2 tylitGG~gglg~~la~~La~~~~~~~il~~r~   34 (181)
T PF08659_consen    2 TYLITGGLGGLGQSLARWLAERGARRLILLGRS   34 (181)
T ss_dssp             EEEEETTTSHHHHHHHHHHHHTT-SEEEEEESS
T ss_pred             EEEEECCccHHHHHHHHHHHHcCCCEEEEeccC
Confidence            689999999999999999999986689999988

It uses NADPH to reduce the keto group to a hydroxy group. ; PDB: 3QP9_D 2FR0_A 2FR1_A 2Z5L_A 3SLK_B 3MJE_B 3MJC_A 3MJT_B 3MJV_A 3MJS_B ....

>COG1028 FabG Dehydrogenases with different specificities (related to short-chain alcohol dehydrogenases) [Secondary metabolites biosynthesis, transport, and catabolism / General function prediction only]

Probab=95.58  E-value=0.022  Score=51.62  Aligned_cols=40  Identities=35%  Similarity=0.511  Sum_probs=34.1

Q ss_pred             cccCCeEEEEcCCChhHHHHHHHHHHcCCceEEEEecCCCC
Q 017760            8 GIEGKTFLVTGGLGHVGSALCLELVRRGAYQVRAFDLRTNS   48 (366)
Q Consensus         8 ~~~~~~VlITGgtGfiG~~L~~~L~~~g~~~V~~~dr~~~~   48 (366)
                      .+.+++++||||++-+|.++++.|.+.|. +|++..++...
T Consensus         2 ~~~~~~ilITGas~GiG~aia~~l~~~G~-~v~~~~~~~~~   41 (251)
T COG1028           2 DLSGKVALVTGASSGIGRAIARALAREGA-RVVVAARRSEE   41 (251)
T ss_pred             CCCCCEEEEeCCCCHHHHHHHHHHHHCCC-eEEEEcCCCch
Confidence            35678999999999999999999999995 88888777543

>KOG1208 consensus Dehydrogenases with different specificities (related to short-chain alcohol dehydrogenases) [Secondary metabolites biosynthesis, transport and catabolism]

Probab=95.53  E-value=0.031  Score=52.93  Aligned_cols=77  Identities=23%  Similarity=0.200  Sum_probs=54.8

Q ss_pred             cccCCeEEEEcCCChhHHHHHHHHHHcCCceEEEEecCCCCccc--c----cccCCCeEEEEcc----cc---------C
Q 017760            8 GIEGKTFLVTGGLGHVGSALCLELVRRGAYQVRAFDLRTNSPWS--H----LLINHGVHCIQGL----RK---------N   68 (366)
Q Consensus         8 ~~~~~~VlITGgtGfiG~~L~~~L~~~g~~~V~~~dr~~~~~~~--~----~~~~~~v~~i~gD----ks---------~   68 (366)
                      ...+++++||||+.-||...++.|.++|. +|+...|+......  .    ......+.++++|    ++         .
T Consensus        32 ~~~~~~~vVTGansGIG~eta~~La~~Ga-~Vv~~~R~~~~~~~~~~~i~~~~~~~~i~~~~lDLssl~SV~~fa~~~~~  110 (314)
T KOG1208|consen   32 DLSGKVALVTGATSGIGFETARELALRGA-HVVLACRNEERGEEAKEQIQKGKANQKIRVIQLDLSSLKSVRKFAEEFKK  110 (314)
T ss_pred             cCCCcEEEEECCCCchHHHHHHHHHhCCC-EEEEEeCCHHHHHHHHHHHHhcCCCCceEEEECCCCCHHHHHHHHHHHHh
Confidence            34568999999999999999999999996 89999998632211  1    1224578889999    11         3


Q ss_pred             CCCCceEEEEeCCccccC
Q 017760           69 NRKCLYTCAVRPAAIYGP   86 (366)
Q Consensus        69 ~~~~l~~~ilRp~~iyGp   86 (366)
                      ....++..|... +|+.+
T Consensus       111 ~~~~ldvLInNA-GV~~~  127 (314)
T KOG1208|consen  111 KEGPLDVLINNA-GVMAP  127 (314)
T ss_pred             cCCCccEEEeCc-ccccC
Confidence            455666666654 45444

>COG1748 LYS9 Saccharopine dehydrogenase and related proteins [Amino acid transport and metabolism]

Probab=95.45  E-value=0.016  Score=56.17  Aligned_cols=54  Identities=28%  Similarity=0.252  Sum_probs=42.4

Q ss_pred             CCeEEEEcCCChhHHHHHHHHHHcCCceEEEEecCCCCccc-ccccCCCeEEEEcc
Q 017760           11 GKTFLVTGGLGHVGSALCLELVRRGAYQVRAFDLRTNSPWS-HLLINHGVHCIQGL   65 (366)
Q Consensus        11 ~~~VlITGgtGfiG~~L~~~L~~~g~~~V~~~dr~~~~~~~-~~~~~~~v~~i~gD   65 (366)
                      |++|+|.|+ |++|+.++..|.++|-.+|++.||+..+... .....++++.++.|
T Consensus         1 m~~ilviGa-G~Vg~~va~~la~~~d~~V~iAdRs~~~~~~i~~~~~~~v~~~~vD   55 (389)
T COG1748           1 MMKILVIGA-GGVGSVVAHKLAQNGDGEVTIADRSKEKCARIAELIGGKVEALQVD   55 (389)
T ss_pred             CCcEEEECC-chhHHHHHHHHHhCCCceEEEEeCCHHHHHHHHhhccccceeEEec
Confidence            578999988 9999999999999985599999999654322 22223578888888

>cd01336 MDH_cytoplasmic_cytosolic Cytoplasmic and cytosolic Malate dehydrogenases

Probab=95.40  E-value=0.027  Score=53.65  Aligned_cols=36  Identities=19%  Similarity=0.314  Sum_probs=30.9

Q ss_pred             CeEEEEcCCChhHHHHHHHHHHcCC------ceEEEEecCCC
Q 017760           12 KTFLVTGGLGHVGSALCLELVRRGA------YQVRAFDLRTN   47 (366)
Q Consensus        12 ~~VlITGgtGfiG~~L~~~L~~~g~------~~V~~~dr~~~   47 (366)
                      .||+|||++|++|++++..|...+.      .+|+++|++++
T Consensus         3 ~kV~I~GAaG~VG~~la~~L~~~~~~~~~~~~el~L~D~~~~   44 (325)
T cd01336           3 IRVLVTGAAGQIAYSLLPMIAKGDVFGPDQPVILHLLDIPPA   44 (325)
T ss_pred             eEEEEECCCCHHHHHHHHHHHhCcccCCCCCcEEEEEEcCCc
Confidence            5799999999999999999998552      28999999764

MDH is one of the key enzymes in the citric acid cycle, facilitating both the conversion of malate to oxaloacetate and replenishing levels of oxalacetate by reductive carboxylation of pyruvate. Members of this subfamily are eukaryotic MDHs localized to the cytoplasm and cytosol. MDHs are part of the NAD(P)-binding Rossmann fold superfamily, which includes a wide variety of protein families including the NAD(P)-binding domains of alcohol dehydrogenases, tyrosine-dependent oxidoreductases, glyceraldehyde-3-phosphate dehydrogenases, formate/glycerate dehydrogenases, siroheme synthases, 6-phosphogluconate dehydrogenases, aminoacid dehydrogenases, repressor rex, and NAD-binding potassium channel domains, among others.

>KOG4169 consensus 15-hydroxyprostaglandin dehydrogenase and related dehydrogenases [Lipid transport and metabolism; General function prediction only]

Probab=95.34  E-value=0.027  Score=50.14  Aligned_cols=57  Identities=30%  Similarity=0.292  Sum_probs=40.8

Q ss_pred             ccCCeEEEEcCCChhHHHHHHHHHHcCCceEEEEecCCCCccccccc----CCCeEEEEcc
Q 017760            9 IEGKTFLVTGGLGHVGSALCLELVRRGAYQVRAFDLRTNSPWSHLLI----NHGVHCIQGL   65 (366)
Q Consensus         9 ~~~~~VlITGgtGfiG~~L~~~L~~~g~~~V~~~dr~~~~~~~~~~~----~~~v~~i~gD   65 (366)
                      ..++++++|||.|-||..++++|+++|...+.+.++.+......++.    ...+-|++.|
T Consensus         3 ~tGKna~vtggagGIGl~~sk~Ll~kgik~~~i~~~~En~~a~akL~ai~p~~~v~F~~~D   63 (261)
T KOG4169|consen    3 LTGKNALVTGGAGGIGLATSKALLEKGIKVLVIDDSEENPEAIAKLQAINPSVSVIFIKCD   63 (261)
T ss_pred             ccCceEEEecCCchhhHHHHHHHHHcCchheeehhhhhCHHHHHHHhccCCCceEEEEEec
Confidence            35789999999999999999999999974444444444322222221    3578889999

>PRK05599 hypothetical protein; Provisional

Probab=95.33  E-value=0.021  Score=51.85  Aligned_cols=52  Identities=19%  Similarity=0.212  Sum_probs=38.0

Q ss_pred             CeEEEEcCCChhHHHHHHHHHHcCCceEEEEecCCCCccc--cccc---CCCeEEEEcc
Q 017760           12 KTFLVTGGLGHVGSALCLELVRRGAYQVRAFDLRTNSPWS--HLLI---NHGVHCIQGL   65 (366)
Q Consensus        12 ~~VlITGgtGfiG~~L~~~L~~~g~~~V~~~dr~~~~~~~--~~~~---~~~v~~i~gD   65 (366)
                      |+++||||++-+|.+++++|. +| ++|++.+|+......  .++.   ...+.++++|
T Consensus         1 ~~vlItGas~GIG~aia~~l~-~g-~~Vil~~r~~~~~~~~~~~l~~~~~~~~~~~~~D   57 (246)
T PRK05599          1 MSILILGGTSDIAGEIATLLC-HG-EDVVLAARRPEAAQGLASDLRQRGATSVHVLSFD   57 (246)
T ss_pred             CeEEEEeCccHHHHHHHHHHh-CC-CEEEEEeCCHHHHHHHHHHHHhccCCceEEEEcc
Confidence            579999999999999999999 58 489999987543211  1111   1246788888

>PRK06603 enoyl-(acyl carrier protein) reductase; Provisional

Probab=95.32  E-value=0.03  Score=51.33  Aligned_cols=36  Identities=22%  Similarity=0.220  Sum_probs=31.7

Q ss_pred             ccCCeEEEEcCCC--hhHHHHHHHHHHcCCceEEEEecC
Q 017760            9 IEGKTFLVTGGLG--HVGSALCLELVRRGAYQVRAFDLR   45 (366)
Q Consensus         9 ~~~~~VlITGgtG--fiG~~L~~~L~~~g~~~V~~~dr~   45 (366)
                      +++++++||||++  -||.++++.|.+.|+ +|++.+++
T Consensus         6 ~~~k~~lITGas~~~GIG~a~a~~la~~G~-~v~~~~r~   43 (260)
T PRK06603          6 LQGKKGLITGIANNMSISWAIAQLAKKHGA-ELWFTYQS   43 (260)
T ss_pred             cCCcEEEEECCCCCcchHHHHHHHHHHcCC-EEEEEeCc
Confidence            4568899999997  799999999999995 89988876

>PRK05579 bifunctional phosphopantothenoylcysteine decarboxylase/phosphopantothenate synthase; Validated

Probab=95.29  E-value=0.027  Score=55.21  Aligned_cols=38  Identities=37%  Similarity=0.535  Sum_probs=34.2

Q ss_pred             cccCCeEEEEcC----------------CChhHHHHHHHHHHcCCceEEEEecCC
Q 017760            8 GIEGKTFLVTGG----------------LGHVGSALCLELVRRGAYQVRAFDLRT   46 (366)
Q Consensus         8 ~~~~~~VlITGg----------------tGfiG~~L~~~L~~~g~~~V~~~dr~~   46 (366)
                      .+++++|+||||                ||.+|.+++++|.++|+ +|++++++.
T Consensus       185 ~l~gk~vlITgG~T~E~ID~VR~isN~SSG~~G~aiA~~l~~~Ga-~V~~v~~~~  238 (399)
T PRK05579        185 DLAGKRVLITAGPTREPIDPVRYITNRSSGKMGYALARAAARRGA-DVTLVSGPV  238 (399)
T ss_pred             ccCCCEEEEeCCCccccccceeeeccCCcchHHHHHHHHHHHCCC-EEEEeCCCc
Confidence            357789999999                99999999999999996 899998765

>cd01078 NAD_bind_H4MPT_DH NADP binding domain of methylene tetrahydromethanopterin dehydrogenase

Probab=95.26  E-value=0.032  Score=48.88  Aligned_cols=37  Identities=35%  Similarity=0.495  Sum_probs=33.1

Q ss_pred             ccCCeEEEEcCCChhHHHHHHHHHHcCCceEEEEecCC
Q 017760            9 IEGKTFLVTGGLGHVGSALCLELVRRGAYQVRAFDLRT   46 (366)
Q Consensus         9 ~~~~~VlITGgtGfiG~~L~~~L~~~g~~~V~~~dr~~   46 (366)
                      .++++++|+||+|.+|+.+++.|.+.| ++|++++|+.
T Consensus        26 l~~~~vlVlGgtG~iG~~~a~~l~~~g-~~V~l~~R~~   62 (194)
T cd01078          26 LKGKTAVVLGGTGPVGQRAAVLLAREG-ARVVLVGRDL   62 (194)
T ss_pred             CCCCEEEEECCCCHHHHHHHHHHHHCC-CEEEEEcCCH
Confidence            456899999999999999999999999 5899998774

Methylene Tetrahydromethanopterin Dehydrogenase (H4MPT DH) NADP binding domain. NADP-dependent H4MPT DH catalyzes the dehydrogenation of methylene- H4MPT and methylene-tetrahydrofolate (H4F) with NADP+ as cofactor. H4F and H4MPT are both cofactors that carry the one-carbon units between the formyl and methyl oxidation level. H4F and H4MPT are structurally analogous to each other with respect to the pterin moiety, but each has distinct side chain. H4MPT is present only in anaerobic methanogenic archaea and aerobic methylotrophic proteobacteria. H4MPT seems to have evolved independently from H4F and functions as a distinct carrier in C1 metabolism. Amino acid DH-like NAD(P)-binding domains are members of the Rossmann fold superfamily and include glutamate, leucine, and phenylalanine DHs, methylene tetrahydrofolate DH, methylene-tetrahydromethanopterin DH, methylene-tetrahydropholate DH/cyclo

>TIGR01915 npdG NADPH-dependent F420 reductase

Probab=95.02  E-value=0.036  Score=49.67  Aligned_cols=35  Identities=26%  Similarity=0.376  Sum_probs=31.4

Q ss_pred             CeEEEEcCCChhHHHHHHHHHHcCCceEEEEecCCC
Q 017760           12 KTFLVTGGLGHVGSALCLELVRRGAYQVRAFDLRTN   47 (366)
Q Consensus        12 ~~VlITGgtGfiG~~L~~~L~~~g~~~V~~~dr~~~   47 (366)
                      |+|.|+||+|.+|+.++..|.+.| ++|...+|++.
T Consensus         1 MkI~IIGG~G~mG~ala~~L~~~G-~~V~v~~r~~~   35 (219)
T TIGR01915         1 MKIAVLGGTGDQGKGLALRLAKAG-NKIIIGSRDLE   35 (219)
T ss_pred             CEEEEEcCCCHHHHHHHHHHHhCC-CEEEEEEcCHH
Confidence            479999999999999999999999 69999988653

This model represents a subset of a parent family described by Pfam model pfam03807. Unlike the parent family, members of this family are found only in species with evidence of coenzyme F420. All members of this family are believed to act as NADPH-dependent F420 reductase.

>TIGR00715 precor6x_red precorrin-6x reductase

Probab=94.91  E-value=0.046  Score=50.22  Aligned_cols=35  Identities=20%  Similarity=0.299  Sum_probs=31.2

Q ss_pred             CeEEEEcCCChhHHHHHHHHHHcCCceEEEEecCCCC
Q 017760           12 KTFLVTGGLGHVGSALCLELVRRGAYQVRAFDLRTNS   48 (366)
Q Consensus        12 ~~VlITGgtGfiG~~L~~~L~~~g~~~V~~~dr~~~~   48 (366)
                      |+|+|+||||. |+.|++.|.+.| ++|++..+....
T Consensus         1 m~ILvlGGT~e-gr~la~~L~~~g-~~v~~s~~t~~~   35 (256)
T TIGR00715         1 MTVLLMGGTVD-SRAIAKGLIAQG-IEILVTVTTSEG   35 (256)
T ss_pred             CeEEEEechHH-HHHHHHHHHhCC-CeEEEEEccCCc
Confidence            58999999999 999999999999 599999887653

This enzyme was found to be a monomer by gel filtration.

>PRK07370 enoyl-(acyl carrier protein) reductase; Validated

Probab=94.87  E-value=0.051  Score=49.80  Aligned_cols=37  Identities=27%  Similarity=0.305  Sum_probs=31.5

Q ss_pred             ccCCeEEEEcCC--ChhHHHHHHHHHHcCCceEEEEecCC
Q 017760            9 IEGKTFLVTGGL--GHVGSALCLELVRRGAYQVRAFDLRT   46 (366)
Q Consensus         9 ~~~~~VlITGgt--GfiG~~L~~~L~~~g~~~V~~~dr~~   46 (366)
                      +++++++||||+  +-||.+++++|.+.|+ +|++.+++.
T Consensus         4 l~~k~~lItGas~~~GIG~aia~~la~~G~-~v~~~~~~~   42 (258)
T PRK07370          4 LTGKKALVTGIANNRSIAWGIAQQLHAAGA-ELGITYLPD   42 (258)
T ss_pred             cCCcEEEEeCCCCCCchHHHHHHHHHHCCC-EEEEEecCc
Confidence            456889999986  7999999999999995 898887654

>KOG1209 consensus 1-Acyl dihydroxyacetone phosphate reductase and related dehydrogenases [Secondary metabolites biosynthesis, transport and catabolism]

Probab=94.83  E-value=0.052  Score=47.84  Aligned_cols=53  Identities=30%  Similarity=0.305  Sum_probs=39.3

Q ss_pred             cCCeEEEEcC-CChhHHHHHHHHHHcCCceEEEEecCCCCccccccc-CCCeEEEEcc
Q 017760           10 EGKTFLVTGG-LGHVGSALCLELVRRGAYQVRAFDLRTNSPWSHLLI-NHGVHCIQGL   65 (366)
Q Consensus        10 ~~~~VlITGg-tGfiG~~L~~~L~~~g~~~V~~~dr~~~~~~~~~~~-~~~v~~i~gD   65 (366)
                      ..++|+|||+ +|-||.+|++++.+.|+ +|.+..|+...-  .++. .-++...+.|
T Consensus         6 ~~k~VlItgcs~GGIG~ala~ef~~~G~-~V~AtaR~~e~M--~~L~~~~gl~~~kLD   60 (289)
T KOG1209|consen    6 QPKKVLITGCSSGGIGYALAKEFARNGY-LVYATARRLEPM--AQLAIQFGLKPYKLD   60 (289)
T ss_pred             CCCeEEEeecCCcchhHHHHHHHHhCCe-EEEEEccccchH--hhHHHhhCCeeEEec
Confidence            3478999885 59999999999999995 999998875331  2222 3456666666

>PRK06997 enoyl-(acyl carrier protein) reductase; Provisional

Probab=94.82  E-value=0.047  Score=50.09  Aligned_cols=36  Identities=22%  Similarity=0.295  Sum_probs=30.9

Q ss_pred             ccCCeEEEEcC--CChhHHHHHHHHHHcCCceEEEEecC
Q 017760            9 IEGKTFLVTGG--LGHVGSALCLELVRRGAYQVRAFDLR   45 (366)
Q Consensus         9 ~~~~~VlITGg--tGfiG~~L~~~L~~~g~~~V~~~dr~   45 (366)
                      +++++++||||  ++-||.++++.|.+.|+ +|++.++.
T Consensus         4 l~~k~vlItGas~~~GIG~a~a~~l~~~G~-~v~~~~~~   41 (260)
T PRK06997          4 LAGKRILITGLLSNRSIAYGIAKACKREGA-ELAFTYVG   41 (260)
T ss_pred             cCCcEEEEeCCCCCCcHHHHHHHHHHHCCC-eEEEEccc
Confidence            45689999996  67999999999999995 89888654

>PRK08159 enoyl-(acyl carrier protein) reductase; Provisional

Probab=94.78  E-value=0.046  Score=50.60  Aligned_cols=36  Identities=17%  Similarity=0.122  Sum_probs=31.6

Q ss_pred             ccCCeEEEEcCC--ChhHHHHHHHHHHcCCceEEEEecC
Q 017760            9 IEGKTFLVTGGL--GHVGSALCLELVRRGAYQVRAFDLR   45 (366)
Q Consensus         9 ~~~~~VlITGgt--GfiG~~L~~~L~~~g~~~V~~~dr~   45 (366)
                      +++++++||||+  +-||.++++.|.+.|+ +|++.+|+
T Consensus         8 ~~~k~~lItGas~~~GIG~aia~~la~~G~-~V~l~~r~   45 (272)
T PRK08159          8 MAGKRGLILGVANNRSIAWGIAKACRAAGA-ELAFTYQG   45 (272)
T ss_pred             ccCCEEEEECCCCCCcHHHHHHHHHHHCCC-EEEEEcCc
Confidence            456899999997  7999999999999996 89888765

>PRK06940 short chain dehydrogenase; Provisional

Probab=94.77  E-value=0.044  Score=50.73  Aligned_cols=52  Identities=19%  Similarity=0.206  Sum_probs=36.5

Q ss_pred             CCeEEEEcCCChhHHHHHHHHHHcCCceEEEEecCCCCccc--cccc--CCCeEEEEcc
Q 017760           11 GKTFLVTGGLGHVGSALCLELVRRGAYQVRAFDLRTNSPWS--HLLI--NHGVHCIQGL   65 (366)
Q Consensus        11 ~~~VlITGgtGfiG~~L~~~L~~~g~~~V~~~dr~~~~~~~--~~~~--~~~v~~i~gD   65 (366)
                      +++++|||+ |.||+++++.|. .|. +|++++|+......  ..+.  ...+.++++|
T Consensus         2 ~k~~lItGa-~gIG~~la~~l~-~G~-~Vv~~~r~~~~~~~~~~~l~~~~~~~~~~~~D   57 (275)
T PRK06940          2 KEVVVVIGA-GGIGQAIARRVG-AGK-KVLLADYNEENLEAAAKTLREAGFDVSTQEVD   57 (275)
T ss_pred             CCEEEEECC-ChHHHHHHHHHh-CCC-EEEEEeCCHHHHHHHHHHHHhcCCeEEEEEee
Confidence            357899997 689999999996 794 89999987532211  1111  2356778888

>PRK08664 aspartate-semialdehyde dehydrogenase; Reviewed

Probab=94.59  E-value=0.051  Score=52.39  Aligned_cols=37  Identities=19%  Similarity=0.210  Sum_probs=30.3

Q ss_pred             cCCeEEEEcCCChhHHHHHHHHHHcCCceEEEEecCC
Q 017760           10 EGKTFLVTGGLGHVGSALCLELVRRGAYQVRAFDLRT   46 (366)
Q Consensus        10 ~~~~VlITGgtGfiG~~L~~~L~~~g~~~V~~~dr~~   46 (366)
                      ++++|.|+||||++|+.|++.|.+....+++.+.++.
T Consensus         2 ~~~~V~I~GatG~iG~~l~~~L~~~p~~el~~~~~s~   38 (349)
T PRK08664          2 MKLKVGILGATGMVGQRFVQLLANHPWFEVTALAASE   38 (349)
T ss_pred             CCcEEEEECCCCHHHHHHHHHHHcCCCceEEEEEcCh
Confidence            4589999999999999999999987644788874443

>PF00056 Ldh_1_N: lactate/malate dehydrogenase, NAD binding domain Prosite entry for lactate dehydrogenase Prosite entry for malate dehydrogenase; InterPro: IPR001236 L-lactate dehydrogenases are metabolic enzymes which catalyse the conversion of L-lactate to pyruvate, the last step in anaerobic glycolysis []

Probab=94.49  E-value=0.082  Score=43.95  Aligned_cols=36  Identities=28%  Similarity=0.505  Sum_probs=31.9

Q ss_pred             CeEEEEcCCChhHHHHHHHHHHcCC-ceEEEEecCCC
Q 017760           12 KTFLVTGGLGHVGSALCLELVRRGA-YQVRAFDLRTN   47 (366)
Q Consensus        12 ~~VlITGgtGfiG~~L~~~L~~~g~-~~V~~~dr~~~   47 (366)
                      |||.|+|++|.+|++++..|...+. .+++.+|+++.
T Consensus         1 ~KV~IiGa~G~VG~~~a~~l~~~~l~~ei~L~D~~~~   37 (141)
T PF00056_consen    1 MKVAIIGAAGNVGSTLALLLAQQGLADEIVLIDINED   37 (141)
T ss_dssp             SEEEEESTTSHHHHHHHHHHHHTTTSSEEEEEESSHH
T ss_pred             CEEEEECCCChHHHHHHHHHHhCCCCCceEEeccCcc
Confidence            5899999999999999999999873 58999999854

L-lactate dehydrogenase is also found as a lens crystallin in bird and crocodile eyes. L-2-hydroxyisocaproate dehydrogenases are also members of the family. Malate dehydrogenases catalyse the interconversion of malate to oxaloacetate []. The enzyme participates in the citric acid cycle. This entry represents the N-terminal, and is thought to be a Rossmann NAD-binding fold.; GO: 0016491 oxidoreductase activity, 0055114 oxidation-reduction process; PDB: 1IB6_B 3HHP_C 1IE3_A 2PWZ_A 1EMD_A 2CMD_A 1EZ4_D 9LDT_B 9LDB_B 2D4A_C ....

>PF01118 Semialdhyde_dh: Semialdehyde dehydrogenase, NAD binding domain; InterPro: IPR000534 The semialdehyde dehydrogenase family is found in N-acetyl-glutamine semialdehyde dehydrogenase (AgrC), which is involved in arginine biosynthesis, and aspartate-semialdehyde dehydrogenase [], an enzyme involved in the biosynthesis of various amino acids from aspartate

Probab=94.47  E-value=0.086  Score=42.47  Aligned_cols=34  Identities=21%  Similarity=0.294  Sum_probs=26.3

Q ss_pred             eEEEEcCCChhHHHHHHHHHHcCCceEEEEecCC
Q 017760           13 TFLVTGGLGHVGSALCLELVRRGAYQVRAFDLRT   46 (366)
Q Consensus        13 ~VlITGgtGfiG~~L~~~L~~~g~~~V~~~dr~~   46 (366)
                      ||.|.|+||++|+.|++.|.+.-..++..+..+.
T Consensus         1 rV~IvGAtG~vG~~l~~lL~~hp~~e~~~~~~~~   34 (121)
T PF01118_consen    1 RVAIVGATGYVGRELLRLLAEHPDFELVALVSSS   34 (121)
T ss_dssp             EEEEESTTSHHHHHHHHHHHHTSTEEEEEEEEST
T ss_pred             CEEEECCCCHHHHHHHHHHhcCCCccEEEeeeec
Confidence            6899999999999999999996533555544443

This family is also found in yeast and fungal Arg5,6 protein, which is cleaved into the enzymes N-acety-gamma-glutamyl-phosphate reductase and acetylglutamate kinase. These are also involved in arginine biosynthesis. All proteins in this entry contain a NAD binding region of semialdehyde dehydrogenase.; GO: 0016620 oxidoreductase activity, acting on the aldehyde or oxo group of donors, NAD or NADP as acceptor, 0051287 NAD binding, 0006520 cellular amino acid metabolic process, 0055114 oxidation-reduction process, 0005737 cytoplasm; PDB: 3Q0E_B 1MB4_A 3PZR_A 1MC4_A 3TZ6_A 3VOS_A 2CVO_B 2R00_C 2QZ9_A 2EP5_C ....

>PRK14874 aspartate-semialdehyde dehydrogenase; Provisional

Probab=94.46  E-value=0.088  Score=50.43  Aligned_cols=37  Identities=24%  Similarity=0.301  Sum_probs=29.6

Q ss_pred             CCeEEEEcCCChhHHHHHHHHHHcCC--ceEEEEecCCC
Q 017760           11 GKTFLVTGGLGHVGSALCLELVRRGA--YQVRAFDLRTN   47 (366)
Q Consensus        11 ~~~VlITGgtGfiG~~L~~~L~~~g~--~~V~~~dr~~~   47 (366)
                      |++|+|.||||++|+.|++.|.+++.  .+++.+.+...
T Consensus         1 ~~~V~IvGAtG~vG~~l~~lL~~~~hp~~~l~~l~s~~~   39 (334)
T PRK14874          1 GYNVAVVGATGAVGREMLNILEERNFPVDKLRLLASARS   39 (334)
T ss_pred             CCEEEEECCCCHHHHHHHHHHHhCCCCcceEEEEEcccc
Confidence            46899999999999999999999762  24577766543

>TIGR01500 sepiapter_red sepiapterin reductase

Probab=94.17  E-value=0.071  Score=48.61  Aligned_cols=52  Identities=17%  Similarity=0.112  Sum_probs=38.1

Q ss_pred             eEEEEcCCChhHHHHHHHHHH----cCCceEEEEecCCCCccc--ccc----cCCCeEEEEcc
Q 017760           13 TFLVTGGLGHVGSALCLELVR----RGAYQVRAFDLRTNSPWS--HLL----INHGVHCIQGL   65 (366)
Q Consensus        13 ~VlITGgtGfiG~~L~~~L~~----~g~~~V~~~dr~~~~~~~--~~~----~~~~v~~i~gD   65 (366)
                      .++||||+|.||.+++++|.+    .|+ +|++++|+......  ..+    ....+.++.+|
T Consensus         2 ~vlItGas~GIG~~~a~~la~~~~~~g~-~V~~~~r~~~~~~~~~~~l~~~~~~~~v~~~~~D   63 (256)
T TIGR01500         2 VCLVTGASRGFGRTIAQELAKCLKSPGS-VLVLSARNDEALRQLKAEIGAERSGLRVVRVSLD   63 (256)
T ss_pred             EEEEecCCCchHHHHHHHHHHhhccCCc-EEEEEEcCHHHHHHHHHHHHhcCCCceEEEEEec
Confidence            589999999999999999997    685 89999987543211  111    12357778888

This model describes sepiapterin reductase, a member of the short chain dehydrogenase/reductase family. The enzyme catalyzes the last step in the biosynthesis of tetrahydrobiopterin. A similar enzyme in Bacillus cereus was isolated for its ability to convert benzil to (S)-benzoin, a property sepiapterin reductase also shares. Cutoff scores for this model are set such that benzil reductase scores between trusted and noise cutoffs.

>KOG0725 consensus Reductases with broad range of substrate specificities [General function prediction only]

Probab=94.17  E-value=0.082  Score=49.05  Aligned_cols=78  Identities=23%  Similarity=0.163  Sum_probs=54.9

Q ss_pred             cccCCeEEEEcCCChhHHHHHHHHHHcCCceEEEEecCCCCccc--ccc-----cCCCeEEEEcccc-------------
Q 017760            8 GIEGKTFLVTGGLGHVGSALCLELVRRGAYQVRAFDLRTNSPWS--HLL-----INHGVHCIQGLRK-------------   67 (366)
Q Consensus         8 ~~~~~~VlITGgtGfiG~~L~~~L~~~g~~~V~~~dr~~~~~~~--~~~-----~~~~v~~i~gDks-------------   67 (366)
                      ...++.++||||+.-||+++|++|.+.|. +|++.+|+......  ...     ....+..+.+|-+             
T Consensus         5 ~l~gkvalVTG~s~GIG~aia~~la~~Ga-~v~i~~r~~~~~~~~~~~~~~~~~~~~~~~~~~~Dv~~~~~~~~l~~~~~   83 (270)
T KOG0725|consen    5 RLAGKVALVTGGSSGIGKAIALLLAKAGA-KVVITGRSEERLEETAQELGGLGYTGGKVLAIVCDVSKEVDVEKLVEFAV   83 (270)
T ss_pred             cCCCcEEEEECCCChHHHHHHHHHHHCCC-EEEEEeCCHHHHHHHHHHHHhcCCCCCeeEEEECcCCCHHHHHHHHHHHH
Confidence            35678999999999999999999999995 89999998754221  110     1245777888811             


Q ss_pred             CC-CCCceEEEEeCCccccC
Q 017760           68 NN-RKCLYTCAVRPAAIYGP   86 (366)
Q Consensus        68 ~~-~~~l~~~ilRp~~iyGp   86 (366)
                      .. .+.++..+-..+.....
T Consensus        84 ~~~~GkidiLvnnag~~~~~  103 (270)
T KOG0725|consen   84 EKFFGKIDILVNNAGALGLT  103 (270)
T ss_pred             HHhCCCCCEEEEcCCcCCCC
Confidence            22 45677777666555444

>PRK05671 aspartate-semialdehyde dehydrogenase; Reviewed

Probab=93.97  E-value=0.15  Score=48.72  Aligned_cols=26  Identities=35%  Similarity=0.423  Sum_probs=23.6

Q ss_pred             cCCeEEEEcCCChhHHHHHHHHHHcC
Q 017760           10 EGKTFLVTGGLGHVGSALCLELVRRG   35 (366)
Q Consensus        10 ~~~~VlITGgtGfiG~~L~~~L~~~g   35 (366)
                      +|++|.|+||||++|..|++.|.+++
T Consensus         3 ~~~~IaIvGATG~vG~eLlrlL~~~~   28 (336)
T PRK05671          3 QPLDIAVVGATGTVGEALVQILEERD   28 (336)
T ss_pred             CCCEEEEEccCCHHHHHHHHHHhhCC
Confidence            45799999999999999999999765

>PTZ00325 malate dehydrogenase; Provisional

Probab=93.69  E-value=0.14  Score=48.73  Aligned_cols=37  Identities=22%  Similarity=0.311  Sum_probs=31.0

Q ss_pred             cCCeEEEEcCCChhHHHHHHHHHHcC-CceEEEEecCC
Q 017760           10 EGKTFLVTGGLGHVGSALCLELVRRG-AYQVRAFDLRT   46 (366)
Q Consensus        10 ~~~~VlITGgtGfiG~~L~~~L~~~g-~~~V~~~dr~~   46 (366)
                      +|.||.|||++|.+|+.++..|..++ .++++++|+..
T Consensus         7 ~~~KI~IiGaaG~VGs~~a~~l~~~~~~~elvL~Di~~   44 (321)
T PTZ00325          7 KMFKVAVLGAAGGIGQPLSLLLKQNPHVSELSLYDIVG   44 (321)
T ss_pred             CCCEEEEECCCCHHHHHHHHHHhcCCCCCEEEEEecCC
Confidence            45799999999999999999998655 25899999943

>PRK14106 murD UDP-N-acetylmuramoyl-L-alanyl-D-glutamate synthetase; Provisional

Probab=93.67  E-value=0.089  Score=52.40  Aligned_cols=55  Identities=29%  Similarity=0.312  Sum_probs=39.9

Q ss_pred             ccCCeEEEEcCCChhHHHHHHHHHHcCCceEEEEecCCCCccc---ccccCCCeEEEEcc
Q 017760            9 IEGKTFLVTGGLGHVGSALCLELVRRGAYQVRAFDLRTNSPWS---HLLINHGVHCIQGL   65 (366)
Q Consensus         9 ~~~~~VlITGgtGfiG~~L~~~L~~~g~~~V~~~dr~~~~~~~---~~~~~~~v~~i~gD   65 (366)
                      +++++|+|+|+++ +|..+++.|++.|+ +|++.|++......   ..+...+++++.+|
T Consensus         3 ~~~k~v~iiG~g~-~G~~~A~~l~~~G~-~V~~~d~~~~~~~~~~~~~l~~~~~~~~~~~   60 (450)
T PRK14106          3 LKGKKVLVVGAGV-SGLALAKFLKKLGA-KVILTDEKEEDQLKEALEELGELGIELVLGE   60 (450)
T ss_pred             cCCCEEEEECCCH-HHHHHHHHHHHCCC-EEEEEeCCchHHHHHHHHHHHhcCCEEEeCC
Confidence            4568999999888 99999999999995 99999987532211   12223356666665

>PRK11199 tyrA bifunctional chorismate mutase/prephenate dehydrogenase; Provisional

Probab=93.51  E-value=0.12  Score=50.30  Aligned_cols=36  Identities=28%  Similarity=0.549  Sum_probs=32.6

Q ss_pred             cCCeEEEEcCCChhHHHHHHHHHHcCCceEEEEecCC
Q 017760           10 EGKTFLVTGGLGHVGSALCLELVRRGAYQVRAFDLRT   46 (366)
Q Consensus        10 ~~~~VlITGgtGfiG~~L~~~L~~~g~~~V~~~dr~~   46 (366)
                      .+++|.|.||+|.+|..++..|.+.| ++|++.|+++
T Consensus        97 ~~~~I~IiGG~GlmG~slA~~l~~~G-~~V~~~d~~~  132 (374)
T PRK11199         97 DLRPVVIVGGKGQLGRLFAKMLTLSG-YQVRILEQDD  132 (374)
T ss_pred             ccceEEEEcCCChhhHHHHHHHHHCC-CeEEEeCCCc
Confidence            35789999999999999999999999 5999999864

>PLN02730 enoyl-[acyl-carrier-protein] reductase

Probab=93.17  E-value=0.17  Score=47.81  Aligned_cols=35  Identities=23%  Similarity=0.307  Sum_probs=30.7

Q ss_pred             ccCCeEEEEcC--CChhHHHHHHHHHHcCCceEEEEecC
Q 017760            9 IEGKTFLVTGG--LGHVGSALCLELVRRGAYQVRAFDLR   45 (366)
Q Consensus         9 ~~~~~VlITGg--tGfiG~~L~~~L~~~g~~~V~~~dr~   45 (366)
                      +++++++||||  +.-||.++++.|.+.|. +|++ .++
T Consensus         7 l~gk~alITGa~~s~GIG~a~A~~la~~Ga-~Vv~-~~~   43 (303)
T PLN02730          7 LRGKRAFIAGVADDNGYGWAIAKALAAAGA-EILV-GTW   43 (303)
T ss_pred             CCCCEEEEeCCCCCCcHHHHHHHHHHHCCC-EEEE-EeC
Confidence            66899999999  79999999999999996 7887 443

>KOG1207 consensus Diacetyl reductase/L-xylulose reductase [Secondary metabolites biosynthesis, transport and catabolism]

Probab=93.03  E-value=0.12  Score=44.14  Aligned_cols=55  Identities=29%  Similarity=0.255  Sum_probs=41.9

Q ss_pred             cCCeEEEEcCCChhHHHHHHHHHHcCCceEEEEecCCCCcccc-cccCCCeEEEEcc
Q 017760           10 EGKTFLVTGGLGHVGSALCLELVRRGAYQVRAFDLRTNSPWSH-LLINHGVHCIQGL   65 (366)
Q Consensus        10 ~~~~VlITGgtGfiG~~L~~~L~~~g~~~V~~~dr~~~~~~~~-~~~~~~v~~i~gD   65 (366)
                      .+..|++||+.--||+.+++.|.+.|. +|+++.|++..-..- ...+..++.+++|
T Consensus         6 aG~~vlvTgagaGIG~~~v~~La~aGA-~ViAvaR~~a~L~sLV~e~p~~I~Pi~~D   61 (245)
T KOG1207|consen    6 AGVIVLVTGAGAGIGKEIVLSLAKAGA-QVIAVARNEANLLSLVKETPSLIIPIVGD   61 (245)
T ss_pred             cceEEEeecccccccHHHHHHHHhcCC-EEEEEecCHHHHHHHHhhCCcceeeeEec
Confidence            568899999999999999999999996 999999886322110 1112347888888

>COG0569 TrkA K+ transport systems, NAD-binding component [Inorganic ion transport and metabolism]

Probab=93.02  E-value=0.12  Score=46.66  Aligned_cols=52  Identities=23%  Similarity=0.303  Sum_probs=39.0

Q ss_pred             CeEEEEcCCChhHHHHHHHHHHcCCceEEEEecCCCCcccccccCCCeEEEEcc
Q 017760           12 KTFLVTGGLGHVGSALCLELVRRGAYQVRAFDLRTNSPWSHLLINHGVHCIQGL   65 (366)
Q Consensus        12 ~~VlITGgtGfiG~~L~~~L~~~g~~~V~~~dr~~~~~~~~~~~~~~v~~i~gD   65 (366)
                      |+++|. |.|-+|+.+|+.|.+.| |+|+++|+++...............+.+|
T Consensus         1 m~iiIi-G~G~vG~~va~~L~~~g-~~Vv~Id~d~~~~~~~~~~~~~~~~v~gd   52 (225)
T COG0569           1 MKIIII-GAGRVGRSVARELSEEG-HNVVLIDRDEERVEEFLADELDTHVVIGD   52 (225)
T ss_pred             CEEEEE-CCcHHHHHHHHHHHhCC-CceEEEEcCHHHHHHHhhhhcceEEEEec
Confidence            466766 78999999999999999 69999998875432211123567888888

>PRK06849 hypothetical protein; Provisional

Probab=92.93  E-value=0.17  Score=49.40  Aligned_cols=36  Identities=25%  Similarity=0.174  Sum_probs=32.9

Q ss_pred             cCCeEEEEcCCChhHHHHHHHHHHcCCceEEEEecCC
Q 017760           10 EGKTFLVTGGLGHVGSALCLELVRRGAYQVRAFDLRT   46 (366)
Q Consensus        10 ~~~~VlITGgtGfiG~~L~~~L~~~g~~~V~~~dr~~   46 (366)
                      ++++|||||++..+|..+++.|.+.| ++|+++|..+
T Consensus         3 ~~~~VLI~G~~~~~~l~iar~l~~~G-~~Vi~~d~~~   38 (389)
T PRK06849          3 TKKTVLITGARAPAALELARLFHNAG-HTVILADSLK   38 (389)
T ss_pred             CCCEEEEeCCCcHHHHHHHHHHHHCC-CEEEEEeCCc
Confidence            46899999999999999999999999 5999998875

>PRK06129 3-hydroxyacyl-CoA dehydrogenase; Validated

Probab=92.76  E-value=0.15  Score=48.21  Aligned_cols=35  Identities=26%  Similarity=0.447  Sum_probs=31.0

Q ss_pred             CCeEEEEcCCChhHHHHHHHHHHcCCceEEEEecCCC
Q 017760           11 GKTFLVTGGLGHVGSALCLELVRRGAYQVRAFDLRTN   47 (366)
Q Consensus        11 ~~~VlITGgtGfiG~~L~~~L~~~g~~~V~~~dr~~~   47 (366)
                      +++|.|+| +|.+|..++..|.+.| ++|+++|+++.
T Consensus         2 ~~~V~VIG-~G~mG~~iA~~la~~G-~~V~v~d~~~~   36 (308)
T PRK06129          2 MGSVAIIG-AGLIGRAWAIVFARAG-HEVRLWDADPA   36 (308)
T ss_pred             CcEEEEEC-ccHHHHHHHHHHHHCC-CeeEEEeCCHH
Confidence            35899997 9999999999999999 59999999853

>PLN00106 malate dehydrogenase

Probab=92.74  E-value=0.22  Score=47.40  Aligned_cols=38  Identities=21%  Similarity=0.364  Sum_probs=32.5

Q ss_pred             cCCeEEEEcCCChhHHHHHHHHHHcCC-ceEEEEecCCC
Q 017760           10 EGKTFLVTGGLGHVGSALCLELVRRGA-YQVRAFDLRTN   47 (366)
Q Consensus        10 ~~~~VlITGgtGfiG~~L~~~L~~~g~-~~V~~~dr~~~   47 (366)
                      ...||.|||++|.+|+.++..|..++. ++++++|+++.
T Consensus        17 ~~~KV~IiGaaG~VG~~~a~~l~~~~~~~el~L~Di~~~   55 (323)
T PLN00106         17 PGFKVAVLGAAGGIGQPLSLLMKMNPLVSELHLYDIANT   55 (323)
T ss_pred             CCCEEEEECCCCHHHHHHHHHHHhCCCCCEEEEEecCCC
Confidence            346899999999999999999997652 58999999873

>KOG1610 consensus Corticosteroid 11-beta-dehydrogenase and related short chain-type dehydrogenases [Secondary metabolites biosynthesis, transport and catabolism; General function prediction only]

Probab=92.68  E-value=1.6  Score=40.98  Aligned_cols=120  Identities=20%  Similarity=0.120  Sum_probs=74.6

Q ss_pred             ccCCeEEEEcCCChhHHHHHHHHHHcCCceEEEEecCCCCccc--ccccCCCeEEEEcc---------------ccCCCC
Q 017760            9 IEGKTFLVTGGLGHVGSALCLELVRRGAYQVRAFDLRTNSPWS--HLLINHGVHCIQGL---------------RKNNRK   71 (366)
Q Consensus         9 ~~~~~VlITGgtGfiG~~L~~~L~~~g~~~V~~~dr~~~~~~~--~~~~~~~v~~i~gD---------------ks~~~~   71 (366)
                      ...+-|+|||.-.-+|..||++|.++|+ .|.+-...++....  .....+....++.|               +..++.
T Consensus        27 ~~~k~VlITGCDSGfG~~LA~~L~~~Gf-~V~Agcl~~~gae~L~~~~~s~rl~t~~LDVT~~esi~~a~~~V~~~l~~~  105 (322)
T KOG1610|consen   27 LSDKAVLITGCDSGFGRLLAKKLDKKGF-RVFAGCLTEEGAESLRGETKSPRLRTLQLDVTKPESVKEAAQWVKKHLGED  105 (322)
T ss_pred             cCCcEEEEecCCcHHHHHHHHHHHhcCC-EEEEEeecCchHHHHhhhhcCCcceeEeeccCCHHHHHHHHHHHHHhcccc
Confidence            3456799999999999999999999995 89988866544322  11114667777888               224444


Q ss_pred             CceEEEEeCCc---cccCCCCCCHHHHHHHHHcCCCCeeecCCCcceeceeHHHHHHHHHHHHhccccCCCCCCCCCCCC
Q 017760           72 CLYTCAVRPAA---IYGPGEERHLPRIVSLAKLGLVPFKIGEPSVKTDWIYVDNLVLALILASMGLLDDIPGQKGRPIAS  148 (366)
Q Consensus        72 ~l~~~ilRp~~---iyGp~~~~~l~~~i~~~~~g~~~~~~g~~~~~~~~v~vdDla~a~~~a~~~l~~~~~~~~~~~~~~  148 (366)
                      ++ +-.+.-++   ++||.|--.+..+.+.+.-              |..=+-.+..+++..++             ...
T Consensus       106 gL-wglVNNAGi~~~~g~~ewl~~~d~~~~l~v--------------NllG~irvT~~~lpLlr-------------~ar  157 (322)
T KOG1610|consen  106 GL-WGLVNNAGISGFLGPDEWLTVEDYRKVLNV--------------NLLGTIRVTKAFLPLLR-------------RAR  157 (322)
T ss_pred             cc-eeEEeccccccccCccccccHHHHHHHHhh--------------hhhhHHHHHHHHHHHHH-------------hcc
Confidence            54 44455554   4555554333333333321              22233456677777775             356


Q ss_pred             CccEEecCC
Q 017760          149 GQPYFVSDG  157 (366)
Q Consensus       149 g~~y~I~~~  157 (366)
                      |++.|+++.
T Consensus       158 GRvVnvsS~  166 (322)
T KOG1610|consen  158 GRVVNVSSV  166 (322)
T ss_pred             CeEEEeccc
Confidence            888888753

>PRK02472 murD UDP-N-acetylmuramoyl-L-alanyl-D-glutamate synthetase; Provisional

Probab=92.66  E-value=0.18  Score=50.10  Aligned_cols=72  Identities=24%  Similarity=0.189  Sum_probs=46.0

Q ss_pred             ccCCeEEEEcCCChhHHHHHHHHHHcCCceEEEEecCCCCcc--cccccCCCeEEEEccccC--CCCCceEEEEeCCc
Q 017760            9 IEGKTFLVTGGLGHVGSALCLELVRRGAYQVRAFDLRTNSPW--SHLLINHGVHCIQGLRKN--NRKCLYTCAVRPAA   82 (366)
Q Consensus         9 ~~~~~VlITGgtGfiG~~L~~~L~~~g~~~V~~~dr~~~~~~--~~~~~~~~v~~i~gDks~--~~~~l~~~ilRp~~   82 (366)
                      +.+++|+|||++| +|.+.++.|.+.|+ +|.+.|++.....  ...+...++++..++...  ...+.+.++..|+.
T Consensus         3 ~~~k~v~v~G~g~-~G~s~a~~l~~~G~-~V~~~d~~~~~~~~~~~~l~~~g~~~~~~~~~~~~~~~~~d~vV~s~gi   78 (447)
T PRK02472          3 YQNKKVLVLGLAK-SGYAAAKLLHKLGA-NVTVNDGKPFSENPEAQELLEEGIKVICGSHPLELLDEDFDLMVKNPGI   78 (447)
T ss_pred             cCCCEEEEEeeCH-HHHHHHHHHHHCCC-EEEEEcCCCccchhHHHHHHhcCCEEEeCCCCHHHhcCcCCEEEECCCC
Confidence            3568899999998 99999999999995 8999997653221  122333456665543110  01124555555543

>PLN02968 Probable N-acetyl-gamma-glutamyl-phosphate reductase

Probab=92.52  E-value=0.19  Score=48.93  Aligned_cols=38  Identities=18%  Similarity=0.316  Sum_probs=32.2

Q ss_pred             cCCeEEEEcCCChhHHHHHHHHHHcCCceEEEEecCCC
Q 017760           10 EGKTFLVTGGLGHVGSALCLELVRRGAYQVRAFDLRTN   47 (366)
Q Consensus        10 ~~~~VlITGgtGfiG~~L~~~L~~~g~~~V~~~dr~~~   47 (366)
                      ++++|.|.||||++|..|++.|.++...+|..+.++..
T Consensus        37 ~~~kVaIvGATG~vG~eLlrlL~~hP~~el~~l~s~~s   74 (381)
T PLN02968         37 EKKRIFVLGASGYTGAEVRRLLANHPDFEITVMTADRK   74 (381)
T ss_pred             cccEEEEECCCChHHHHHHHHHHhCCCCeEEEEEChhh
Confidence            45799999999999999999999985458999877543

>cd01075 NAD_bind_Leu_Phe_Val_DH NAD(P) binding domain of leucine dehydrogenase, phenylalanine dehydrogenase, and valine dehydrogenase

Probab=92.42  E-value=0.25  Score=43.58  Aligned_cols=37  Identities=38%  Similarity=0.565  Sum_probs=31.9

Q ss_pred             cccCCeEEEEcCCChhHHHHHHHHHHcCCceEEEEecCC
Q 017760            8 GIEGKTFLVTGGLGHVGSALCLELVRRGAYQVRAFDLRT   46 (366)
Q Consensus         8 ~~~~~~VlITGgtGfiG~~L~~~L~~~g~~~V~~~dr~~   46 (366)
                      .+++++|+|+|. |-+|+++++.|.+.|. +|++.|+++
T Consensus        25 ~l~gk~v~I~G~-G~vG~~~A~~L~~~G~-~Vvv~D~~~   61 (200)
T cd01075          25 SLEGKTVAVQGL-GKVGYKLAEHLLEEGA-KLIVADINE   61 (200)
T ss_pred             CCCCCEEEEECC-CHHHHHHHHHHHHCCC-EEEEEcCCH
Confidence            456789999976 6899999999999995 899998775

Amino acid dehydrogenase (DH) is a widely distributed family of enzymes that catalyzes the oxidative deamination of an amino acid to its keto acid and ammonia with concomitant reduction of NADP+. For example, leucine DH catalyzes the reversible oxidative deamination of L-leucine and several other straight or branched chain amino acids to the corresponding 2-oxoacid derivative. Amino acid DH -like NAD(P)-binding domains are members of the Rossmann fold superfamily and include glutamate, leucine, and phenylalanine DHs, methylene tetrahydrofolate DH, methylene-tetrahydromethanopterin DH, methylene-tetrahydropholate DH/cyclohydrolase, Shikimate DH-like proteins, malate oxidoreductases, and glutamyl tRNA reductase. Amino acid DHs catalyze the deamination of amino acids to keto acids with NAD(P)+ as a cofactor. The NAD(P)-binding Rossmann fold superfamily inc

>KOG1199 consensus Short-chain alcohol dehydrogenase/3-hydroxyacyl-CoA dehydrogenase [Secondary metabolites biosynthesis, transport and catabolism]

Probab=92.38  E-value=2.7  Score=36.01  Aligned_cols=56  Identities=27%  Similarity=0.287  Sum_probs=43.4

Q ss_pred             ccCCeEEEEcCCChhHHHHHHHHHHcCCceEEEEecCCCCccc-ccccCCCeEEEEcc
Q 017760            9 IEGKTFLVTGGLGHVGSALCLELVRRGAYQVRAFDLRTNSPWS-HLLINHGVHCIQGL   65 (366)
Q Consensus         9 ~~~~~VlITGgtGfiG~~L~~~L~~~g~~~V~~~dr~~~~~~~-~~~~~~~v~~i~gD   65 (366)
                      .++..-+||||..-+|.+.++.|.+.|. .|..+|...++... ......++.|...|
T Consensus         7 ~kglvalvtggasglg~ataerlakqga-sv~lldlp~skg~~vakelg~~~vf~pad   63 (260)
T KOG1199|consen    7 TKGLVALVTGGASGLGKATAERLAKQGA-SVALLDLPQSKGADVAKELGGKVVFTPAD   63 (260)
T ss_pred             hcCeeEEeecCcccccHHHHHHHHhcCc-eEEEEeCCcccchHHHHHhCCceEEeccc
Confidence            4456679999999999999999999996 89999998776543 22234566777777

>KOG1611 consensus Predicted short chain-type dehydrogenase [General function prediction only]

Probab=92.23  E-value=0.49  Score=42.25  Aligned_cols=73  Identities=21%  Similarity=0.170  Sum_probs=49.2

Q ss_pred             ccCCeEEEEcCCChhHHHHHHHHHHc-CCceEEEEecCCCCccccc-----ccCCCeEEEEcc---------------cc
Q 017760            9 IEGKTFLVTGGLGHVGSALCLELVRR-GAYQVRAFDLRTNSPWSHL-----LINHGVHCIQGL---------------RK   67 (366)
Q Consensus         9 ~~~~~VlITGgtGfiG~~L~~~L~~~-g~~~V~~~dr~~~~~~~~~-----~~~~~v~~i~gD---------------ks   67 (366)
                      |..+.|+||||+--||-.|+++|++. |. ++++..++.++.....     ...++++.++.|               +.
T Consensus         1 Mspksv~ItGaNRGIGlgLVk~llk~~~i-~~iiat~r~~e~a~~~l~~k~~~d~rvHii~Ldvt~deS~~~~~~~V~~i   79 (249)
T KOG1611|consen    1 MSPKSVFITGANRGIGLGLVKELLKDKGI-EVIIATARDPEKAATELALKSKSDSRVHIIQLDVTCDESIDNFVQEVEKI   79 (249)
T ss_pred             CCCccEEEeccCcchhHHHHHHHhcCCCc-EEEEEecCChHHhhHHHHHhhccCCceEEEEEecccHHHHHHHHHHHHhh
Confidence            44567999999999999999999976 54 5555555533321111     125789999988               22


Q ss_pred             CCCCCceEEEEeCCc
Q 017760           68 NNRKCLYTCAVRPAA   82 (366)
Q Consensus        68 ~~~~~l~~~ilRp~~   82 (366)
                      -...|++.-+...+.
T Consensus        80 Vg~~GlnlLinNaGi   94 (249)
T KOG1611|consen   80 VGSDGLNLLINNAGI   94 (249)
T ss_pred             cccCCceEEEeccce
Confidence            446677766665544

>PRK00436 argC N-acetyl-gamma-glutamyl-phosphate reductase; Validated

Probab=92.19  E-value=0.24  Score=47.60  Aligned_cols=35  Identities=20%  Similarity=0.184  Sum_probs=28.5

Q ss_pred             CCeEEEEcCCChhHHHHHHHHHHcCCceEEEEecC
Q 017760           11 GKTFLVTGGLGHVGSALCLELVRRGAYQVRAFDLR   45 (366)
Q Consensus        11 ~~~VlITGgtGfiG~~L~~~L~~~g~~~V~~~dr~   45 (366)
                      |++|+|.||||++|+.+++.|.+....++.++..+
T Consensus         2 m~kVaIiGAtG~vG~~l~~~L~~~p~~elv~v~~~   36 (343)
T PRK00436          2 MIKVGIVGASGYTGGELLRLLLNHPEVEIVAVTSR   36 (343)
T ss_pred             CeEEEEECCCCHHHHHHHHHHHcCCCceEEEEECc
Confidence            47999999999999999999998743477666543

>KOG1014 consensus 17 beta-hydroxysteroid dehydrogenase type 3, HSD17B3 [Lipid transport and metabolism]

Probab=92.19  E-value=0.14  Score=47.66  Aligned_cols=53  Identities=23%  Similarity=0.146  Sum_probs=40.2

Q ss_pred             CeEEEEcCCChhHHHHHHHHHHcCCceEEEEecCCCCccc-----ccccCCCeEEEEcc
Q 017760           12 KTFLVTGGLGHVGSALCLELVRRGAYQVRAFDLRTNSPWS-----HLLINHGVHCIQGL   65 (366)
Q Consensus        12 ~~VlITGgtGfiG~~L~~~L~~~g~~~V~~~dr~~~~~~~-----~~~~~~~v~~i~gD   65 (366)
                      .=.+|||||.-||.+.+++|.++|. +|+++.|+..+-..     .+...-.++++..|
T Consensus        50 ~WAVVTGaTDGIGKayA~eLAkrG~-nvvLIsRt~~KL~~v~kEI~~~~~vev~~i~~D  107 (312)
T KOG1014|consen   50 SWAVVTGATDGIGKAYARELAKRGF-NVVLISRTQEKLEAVAKEIEEKYKVEVRIIAID  107 (312)
T ss_pred             CEEEEECCCCcchHHHHHHHHHcCC-EEEEEeCCHHHHHHHHHHHHHHhCcEEEEEEEe
Confidence            4478999999999999999999996 89999998754321     11112457777887

>PF03721 UDPG_MGDP_dh_N: UDP-glucose/GDP-mannose dehydrogenase family, NAD binding domain; InterPro: IPR001732 The UDP-glucose/GDP-mannose dehydrogenases are a small group of enzymes which possesses the ability to catalyse the NAD-dependent 2-fold oxidation of an alcohol to an acid without the release of an aldehyde intermediate [, ]

Probab=92.09  E-value=0.22  Score=43.37  Aligned_cols=129  Identities=21%  Similarity=0.208  Sum_probs=67.4

Q ss_pred             CeEEEEcCCChhHHHHHHHHHHcCCceEEEEecCCCCcccccccCCCeEEEEcc------ccCCCCCceEEEEeCCcccc
Q 017760           12 KTFLVTGGLGHVGSALCLELVRRGAYQVRAFDLRTNSPWSHLLINHGVHCIQGL------RKNNRKCLYTCAVRPAAIYG   85 (366)
Q Consensus        12 ~~VlITGgtGfiG~~L~~~L~~~g~~~V~~~dr~~~~~~~~~~~~~~v~~i~gD------ks~~~~~l~~~ilRp~~iyG   85 (366)
                      |+|.|. |.||+|-.++..|.+.| ++|+++|.++..-  ..+......+..-.      +..+.+++..+         
T Consensus         1 M~I~Vi-GlGyvGl~~A~~lA~~G-~~V~g~D~~~~~v--~~l~~g~~p~~E~~l~~ll~~~~~~~~l~~t---------   67 (185)
T PF03721_consen    1 MKIAVI-GLGYVGLPLAAALAEKG-HQVIGVDIDEEKV--EALNNGELPIYEPGLDELLKENVSAGRLRAT---------   67 (185)
T ss_dssp             -EEEEE---STTHHHHHHHHHHTT-SEEEEE-S-HHHH--HHHHTTSSSS-CTTHHHHHHHHHHTTSEEEE---------
T ss_pred             CEEEEE-CCCcchHHHHHHHHhCC-CEEEEEeCChHHH--HHHhhccccccccchhhhhccccccccchhh---------
Confidence            578888 89999999999999999 6999999886321  11111111110000      00111111111         


Q ss_pred             CCCCCCHHHHHHHHHcCCCC----eeecCCCcceeceeHHHHHHHHHHHHhccccCCCCCCCCCCCCCccEEecCCCCCC
Q 017760           86 PGEERHLPRIVSLAKLGLVP----FKIGEPSVKTDWIYVDNLVLALILASMGLLDDIPGQKGRPIASGQPYFVSDGFPIN  161 (366)
Q Consensus        86 p~~~~~l~~~i~~~~~g~~~----~~~g~~~~~~~~v~vdDla~a~~~a~~~l~~~~~~~~~~~~~~g~~y~I~~~~~vs  161 (366)
                             ...-..+......    ..+-+.+...|+.|++.+++.+...++               .+..+-+-+.-++.
T Consensus        68 -------~~~~~ai~~adv~~I~VpTP~~~~~~~Dls~v~~a~~~i~~~l~---------------~~~lvV~~STvppG  125 (185)
T PF03721_consen   68 -------TDIEEAIKDADVVFICVPTPSDEDGSPDLSYVESAIESIAPVLR---------------PGDLVVIESTVPPG  125 (185)
T ss_dssp             -------SEHHHHHHH-SEEEE----EBETTTSBETHHHHHHHHHHHHHHC---------------SCEEEEESSSSSTT
T ss_pred             -------hhhhhhhhccceEEEecCCCccccCCccHHHHHHHHHHHHHHHh---------------hcceEEEccEEEEe
Confidence                   0011112222111    112233455688899999998887774               25666666666655


Q ss_pred             HHH-HHHHHHHhcCC
Q 017760          162 TFE-FIGPLLKTLDY  175 (366)
Q Consensus       162 ~~e-~~~~l~~~lg~  175 (366)
                      .-| +...+.+..+.
T Consensus       126 tt~~~~~~ile~~~~  140 (185)
T PF03721_consen  126 TTEELLKPILEKRSG  140 (185)
T ss_dssp             HHHHHHHHHHHHHCC
T ss_pred             eehHhhhhhhhhhcc
Confidence            444 88888777664

The enzymes have a wide range of functions. In plants UDP-glucose dehydrogenase, 1.1.1.22 from EC, is an important enzyme in the synthesis of hemicellulose and pectin [], which are the components of newly formed cell walls; while in zebrafish UDP-glucose dehydrogenase is required for cardiac valve formation []. In Xanthomonas campestris, a plant pathogen, UDP-glucose dehydrogenase is required for virulence []. GDP-mannose dehydrogenase, 1.1.1.132 from EC, catalyses the formation of GDP-mannuronic acid, which is the monomeric unit from which the exopolysaccharide alginate is formed. Alginate is secreted by a number of bacteria, which include Pseudomonas aeruginosa and Azotobacter vinelandii. In P. aeruginosa, alginate is believed to play an important role in the bacteria's resistance to antibiotics and the host immune response [], while in A. vinelandii it is essential for the encystment process []. This entry represents the N-terminal NAD(+)-binding domain. Structural studies indicate that this domain forms an alpha-beta structure containing the six-stranded parallel beta sheet characteristic of the dinucleotide binding Rossman fold [, ].; GO: 0016616 oxidoreductase activity, acting on the CH-OH group of donors, NAD or NADP as acceptor, 0051287 NAD binding, 0055114 oxidation-reduction process; PDB: 3OJO_A 3OJL_A 1MV8_B 1MUU_A 1MFZ_C 3GG2_D 1DLJ_A 1DLI_A 3G79_B 2Y0E_D ....

>PRK09496 trkA potassium transporter peripheral membrane component; Reviewed

Probab=92.01  E-value=0.16  Score=50.60  Aligned_cols=50  Identities=22%  Similarity=0.331  Sum_probs=38.6

Q ss_pred             CeEEEEcCCChhHHHHHHHHHHcCCceEEEEecCCCCcccccccC-CCeEEEEcc
Q 017760           12 KTFLVTGGLGHVGSALCLELVRRGAYQVRAFDLRTNSPWSHLLIN-HGVHCIQGL   65 (366)
Q Consensus        12 ~~VlITGgtGfiG~~L~~~L~~~g~~~V~~~dr~~~~~~~~~~~~-~~v~~i~gD   65 (366)
                      |+|+|+|+ |.+|+++++.|.+.| ++|+++++++...  ..... .+++.+.||
T Consensus         1 m~viIiG~-G~ig~~~a~~L~~~g-~~v~vid~~~~~~--~~~~~~~~~~~~~gd   51 (453)
T PRK09496          1 MKIIIVGA-GQVGYTLAENLSGEN-NDVTVIDTDEERL--RRLQDRLDVRTVVGN   51 (453)
T ss_pred             CEEEEECC-CHHHHHHHHHHHhCC-CcEEEEECCHHHH--HHHHhhcCEEEEEeC
Confidence            47999976 999999999999999 5899998875432  22222 467888888

>PF04127 DFP: DNA / pantothenate metabolism flavoprotein; InterPro: IPR007085 This entry represents the C-terminal domain found in DNA/pantothenate metabolism flavoproteins, which affects synthesis of DNA and pantothenate metabolism

Probab=91.97  E-value=0.5  Score=41.17  Aligned_cols=50  Identities=38%  Similarity=0.537  Sum_probs=33.6

Q ss_pred             cCCeEEEEcC----------------CChhHHHHHHHHHHcCCceEEEEecCCCCcccccccCCCeEEEEcc
Q 017760           10 EGKTFLVTGG----------------LGHVGSALCLELVRRGAYQVRAFDLRTNSPWSHLLINHGVHCIQGL   65 (366)
Q Consensus        10 ~~~~VlITGg----------------tGfiG~~L~~~L~~~g~~~V~~~dr~~~~~~~~~~~~~~v~~i~gD   65 (366)
                      ++++||||+|                ||-.|.+|++++..+|+ +|+.+....+..     .+++++.+..+
T Consensus         2 ~gk~vlITaG~T~E~iD~VR~ItN~SSG~~G~~lA~~~~~~Ga-~V~li~g~~~~~-----~p~~~~~i~v~   67 (185)
T PF04127_consen    2 KGKKVLITAGPTREPIDPVRFITNRSSGKMGAALAEEAARRGA-EVTLIHGPSSLP-----PPPGVKVIRVE   67 (185)
T ss_dssp             TT-EEEEEESB-EEESSSSEEEEES--SHHHHHHHHHHHHTT--EEEEEE-TTS---------TTEEEEE-S
T ss_pred             CCCEEEEECCCccccCCCceEecCCCcCHHHHHHHHHHHHCCC-EEEEEecCcccc-----ccccceEEEec
Confidence            4577888876                79999999999999995 899997663211     13577777776

These proteins contain ATP, phosphopantothenate, and cysteine binding sites. The structure of this domain has been determined in human phosphopantothenoylcysteine (PPC) synthetase [] and as the PPC synthase domain (CoaB) from the Escherichia coli coenzyme A bifunctional protein CoaBC []. This domain adopts a 3-layer alpha/beta/alpha fold with mixed beta-sheets, which topologically resembles a combination of Rossmann-like and ribokinase-like folds. The structure of these proteins predicts a ping pong mechanism with initial formation of an acyladenylate intermediate, followed by release of pyrophosphate and attack by cysteine to form the final products PPC and AMP. ; PDB: 1U7W_A 1U7U_A 1U80_C 1U7Z_A 1P9O_B 2GK4_A.

>PRK04148 hypothetical protein; Provisional

Probab=91.80  E-value=0.16  Score=41.68  Aligned_cols=50  Identities=16%  Similarity=0.256  Sum_probs=38.5

Q ss_pred             CCeEEEEcCCChhHHHHHHHHHHcCCceEEEEecCCCCcccccccCCCeEEEEcc
Q 017760           11 GKTFLVTGGLGHVGSALCLELVRRGAYQVRAFDLRTNSPWSHLLINHGVHCIQGL   65 (366)
Q Consensus        11 ~~~VlITGgtGfiG~~L~~~L~~~g~~~V~~~dr~~~~~~~~~~~~~~v~~i~gD   65 (366)
                      +++|++.| .| .|.+++..|.+.| ++|+++|.++...  +......++.+.+|
T Consensus        17 ~~kileIG-~G-fG~~vA~~L~~~G-~~ViaIDi~~~aV--~~a~~~~~~~v~dD   66 (134)
T PRK04148         17 NKKIVELG-IG-FYFKVAKKLKESG-FDVIVIDINEKAV--EKAKKLGLNAFVDD   66 (134)
T ss_pred             CCEEEEEE-ec-CCHHHHHHHHHCC-CEEEEEECCHHHH--HHHHHhCCeEEECc
Confidence            46799884 55 8999999999999 5999999997532  22334567888888

>PRK08655 prephenate dehydrogenase; Provisional

Probab=91.79  E-value=0.24  Score=49.26  Aligned_cols=35  Identities=20%  Similarity=0.332  Sum_probs=31.7

Q ss_pred             CeEEEEcCCChhHHHHHHHHHHcCCceEEEEecCCC
Q 017760           12 KTFLVTGGLGHVGSALCLELVRRGAYQVRAFDLRTN   47 (366)
Q Consensus        12 ~~VlITGgtGfiG~~L~~~L~~~g~~~V~~~dr~~~   47 (366)
                      |+|.|.||+|.+|..+++.|.+.| ++|++.++++.
T Consensus         1 MkI~IIGG~G~mG~slA~~L~~~G-~~V~v~~r~~~   35 (437)
T PRK08655          1 MKISIIGGTGGLGKWFARFLKEKG-FEVIVTGRDPK   35 (437)
T ss_pred             CEEEEEecCCHHHHHHHHHHHHCC-CEEEEEECChH
Confidence            479999999999999999999999 58999998754

>PRK09496 trkA potassium transporter peripheral membrane component; Reviewed

Probab=91.66  E-value=0.21  Score=49.67  Aligned_cols=54  Identities=20%  Similarity=0.290  Sum_probs=39.7

Q ss_pred             cCCeEEEEcCCChhHHHHHHHHHHcCCceEEEEecCCCCcccccccCCCeEEEEcc
Q 017760           10 EGKTFLVTGGLGHVGSALCLELVRRGAYQVRAFDLRTNSPWSHLLINHGVHCIQGL   65 (366)
Q Consensus        10 ~~~~VlITGgtGfiG~~L~~~L~~~g~~~V~~~dr~~~~~~~~~~~~~~v~~i~gD   65 (366)
                      .+++|+|.|+ |.+|+.+++.|.+.| ++|+++|.++...........++..+.||
T Consensus       230 ~~~~iiIiG~-G~~g~~l~~~L~~~~-~~v~vid~~~~~~~~~~~~~~~~~~i~gd  283 (453)
T PRK09496        230 PVKRVMIVGG-GNIGYYLAKLLEKEG-YSVKLIERDPERAEELAEELPNTLVLHGD  283 (453)
T ss_pred             CCCEEEEECC-CHHHHHHHHHHHhCC-CeEEEEECCHHHHHHHHHHCCCCeEEECC
Confidence            4688999977 999999999999999 58999987764321111112467788888

>PLN00015 protochlorophyllide reductase

Probab=91.59  E-value=0.2  Score=47.20  Aligned_cols=50  Identities=14%  Similarity=0.005  Sum_probs=36.4

Q ss_pred             EEEcCCChhHHHHHHHHHHcC-CceEEEEecCCCCccc--ccc--cCCCeEEEEcc
Q 017760           15 LVTGGLGHVGSALCLELVRRG-AYQVRAFDLRTNSPWS--HLL--INHGVHCIQGL   65 (366)
Q Consensus        15 lITGgtGfiG~~L~~~L~~~g-~~~V~~~dr~~~~~~~--~~~--~~~~v~~i~gD   65 (366)
                      +||||++.||.++++.|.++| + +|++.+|+......  ..+  ....+.++++|
T Consensus         1 lITGas~GIG~aia~~l~~~G~~-~V~~~~r~~~~~~~~~~~l~~~~~~~~~~~~D   55 (308)
T PLN00015          1 IITGASSGLGLATAKALAETGKW-HVVMACRDFLKAERAAKSAGMPKDSYTVMHLD   55 (308)
T ss_pred             CEeCCCChHHHHHHHHHHHCCCC-EEEEEeCCHHHHHHHHHHhcCCCCeEEEEEec
Confidence            599999999999999999999 6 79999886532210  111  12356777888

>PF01488 Shikimate_DH: Shikimate / quinate 5-dehydrogenase; InterPro: IPR006151 This entry represents a domain found in shikimate and quinate dehydrogenases, as well as glutamyl-tRNA reductases

Probab=91.33  E-value=0.52  Score=38.74  Aligned_cols=57  Identities=19%  Similarity=0.242  Sum_probs=41.0

Q ss_pred             cccCCeEEEEcCCChhHHHHHHHHHHcCCceEEEEecCCCCccc--ccccCCCeEEEEcc
Q 017760            8 GIEGKTFLVTGGLGHVGSALCLELVRRGAYQVRAFDLRTNSPWS--HLLINHGVHCIQGL   65 (366)
Q Consensus         8 ~~~~~~VlITGgtGfiG~~L~~~L~~~g~~~V~~~dr~~~~~~~--~~~~~~~v~~i~gD   65 (366)
                      ..++++++|.|+ |-.|+.++..|.+.|..+|++++|+......  .......++.+..+
T Consensus         9 ~l~~~~vlviGa-Gg~ar~v~~~L~~~g~~~i~i~nRt~~ra~~l~~~~~~~~~~~~~~~   67 (135)
T PF01488_consen    9 DLKGKRVLVIGA-GGAARAVAAALAALGAKEITIVNRTPERAEALAEEFGGVNIEAIPLE   67 (135)
T ss_dssp             TGTTSEEEEESS-SHHHHHHHHHHHHTTSSEEEEEESSHHHHHHHHHHHTGCSEEEEEGG
T ss_pred             CcCCCEEEEECC-HHHHHHHHHHHHHcCCCEEEEEECCHHHHHHHHHHcCccccceeeHH
Confidence            456789999976 7799999999999998779999987543211  12223455666654

Shikimate 5-dehydrogenase (1.1.1.25 from EC) catalyses the conversion of shikimate to 5-dehydroshikimate [, ]. This reaction is part of the shikimate pathway which is involved in the biosynthesis of aromatic amino acids []. Quinate 5-dehydrogenase catalyses the conversion of quinate to 5-dehydroquinate. This reaction is part of the quinate pathway where quinic acid is exploited as a source of carbon in prokaryotes and microbial eukaryotes. Both the shikimate and quinate pathways share two common pathway metabolites, 3-dehydroquinate and dehydroshikimate. Glutamyl-tRNA reductase (1.2.1.70 from EC) catalyzes the first step of tetrapyrrole biosynthesis in plants, archaea and most bacteria. The dimeric enzyme has an unusual V-shaped architecture where each monomer consists of three domains linked by a long 'spinal' alpha-helix. The central catalytic domain specifically recognises the glutamate moiety of the substrate []. ; PDB: 2EV9_B 2CY0_B 1WXD_A 2D5C_A 1NVT_B 2EGG_A 3PWZ_A 3DOO_A 3DON_A 3FBT_C ....

>TIGR00521 coaBC_dfp phosphopantothenoylcysteine decarboxylase/phosphopantothenate--cysteine ligase, prokaryotic

Probab=91.27  E-value=0.32  Score=47.52  Aligned_cols=37  Identities=38%  Similarity=0.548  Sum_probs=32.6

Q ss_pred             ccCCeEEEEcC----------------CChhHHHHHHHHHHcCCceEEEEecCC
Q 017760            9 IEGKTFLVTGG----------------LGHVGSALCLELVRRGAYQVRAFDLRT   46 (366)
Q Consensus         9 ~~~~~VlITGg----------------tGfiG~~L~~~L~~~g~~~V~~~dr~~   46 (366)
                      +++++|+||||                ||.+|.+++++|..+|+ +|+.+..+.
T Consensus       183 ~~~~~vlit~g~t~E~iD~VR~itN~SSG~~g~~~a~~~~~~Ga-~V~~~~g~~  235 (390)
T TIGR00521       183 LEGKRVLITAGPTREPIDPVRFISNLSSGKMGLALAEAAYKRGA-DVTLITGPV  235 (390)
T ss_pred             cCCceEEEecCCccCCCCceeeecCCCcchHHHHHHHHHHHCCC-EEEEeCCCC
Confidence            66799999999                47899999999999996 899987654

This model represents a bifunctional enzyme that catalyzes the second and third steps (cysteine ligation, EC 6.3.2.5, and decarboxylation, EC 4.1.1.36) in the biosynthesis of coenzyme A (CoA) from pantothenate in bacteria. In early descriptions of this flavoprotein, a ts mutation in one region of the protein appeared to cause a defect in DNA metaobolism rather than an increased need for the pantothenate precursor beta-alanine. This protein was then called dfp, for DNA/pantothenate metabolism flavoprotein. The authors responsible for detecting phosphopantothenate--cysteine ligase activity suggest renaming this bifunctional protein coaBC for its role in CoA biosynthesis. This enzyme contains the FMN cofactor, but no FAD or pyruvoyl group. The amino-terminal region contains the phosphopantothenoylcysteine decarboxylase activity.

>PRK06300 enoyl-(acyl carrier protein) reductase; Provisional

Probab=91.17  E-value=0.4  Score=45.13  Aligned_cols=36  Identities=19%  Similarity=0.192  Sum_probs=31.1

Q ss_pred             ccCCeEEEEcCC--ChhHHHHHHHHHHcCCceEEEEecC
Q 017760            9 IEGKTFLVTGGL--GHVGSALCLELVRRGAYQVRAFDLR   45 (366)
Q Consensus         9 ~~~~~VlITGgt--GfiG~~L~~~L~~~g~~~V~~~dr~   45 (366)
                      .++++++||||+  .-||+++++.|.++|+ +|++.++.
T Consensus         6 ~~gk~alITGa~~~~GIG~a~A~~la~~Ga-~Vvv~~~~   43 (299)
T PRK06300          6 LTGKIAFIAGIGDDQGYGWGIAKALAEAGA-TILVGTWV   43 (299)
T ss_pred             CCCCEEEEeCCCCCCCHHHHHHHHHHHCCC-EEEEEecc
Confidence            356899999995  8899999999999996 89887754

>cd05294 LDH-like_MDH_nadp A lactate dehydrogenases-like structure with malate dehydrogenase enzymatic activity

Probab=91.08  E-value=0.38  Score=45.54  Aligned_cols=35  Identities=23%  Similarity=0.326  Sum_probs=30.8

Q ss_pred             CeEEEEcCCChhHHHHHHHHHHcCC-ceEEEEecCC
Q 017760           12 KTFLVTGGLGHVGSALCLELVRRGA-YQVRAFDLRT   46 (366)
Q Consensus        12 ~~VlITGgtGfiG~~L~~~L~~~g~-~~V~~~dr~~   46 (366)
                      |||.|+|++|++|..++..|...|. .+|+++|++.
T Consensus         1 ~kI~IiGatG~vG~~~a~~l~~~g~~~~v~lvd~~~   36 (309)
T cd05294           1 MKVSIIGASGRVGSATALLLAKEDVVKEINLISRPK   36 (309)
T ss_pred             CEEEEECCCChHHHHHHHHHHhCCCCCEEEEEECcc
Confidence            5899999999999999999999983 2599999954

The LDH-like MDH proteins have a lactate dehyhydrogenase-like (LDH-like) structure and malate dehydrogenase (MDH) enzymatic activity. This subgroup is composed of some archaeal LDH-like MDHs that prefer NADP(H) rather than NAD(H) as a cofactor. One member, MJ0490 from Methanococcus jannaschii, has been observed to form dimers and tetramers during crystalization, although it is believed to exist primarilly as a tetramer in solution. In addition to its MDH activity, MJ0490 also possesses fructose-1,6-bisphosphate-activated LDH activity. Members of this subgroup have a higher sequence similarity to LDHs than to other MDHs. LDH catalyzes the last step of glycolysis in which pyruvate is converted to L-lactate. MDH is one of the key enzymes in the citric acid cycle, facilitating both the conversion of malate to oxaloacetate and replenishing levels of oxalacetate by reductive carbox

>PRK08040 putative semialdehyde dehydrogenase; Provisional

Probab=91.00  E-value=0.74  Score=44.07  Aligned_cols=38  Identities=29%  Similarity=0.304  Sum_probs=29.4

Q ss_pred             ccCCeEEEEcCCChhHHHHHHHHHHc--CCceEEEEecCC
Q 017760            9 IEGKTFLVTGGLGHVGSALCLELVRR--GAYQVRAFDLRT   46 (366)
Q Consensus         9 ~~~~~VlITGgtGfiG~~L~~~L~~~--g~~~V~~~dr~~   46 (366)
                      +++++|.|.||||++|..|++.|.++  ...++..+....
T Consensus         2 ~~~~~vaIvGATG~vG~ellrlL~~~~hP~~~l~~laS~~   41 (336)
T PRK08040          2 SEGWNIALLGATGAVGEALLELLAERQFPVGELYALASEE   41 (336)
T ss_pred             CCCCEEEEEccCCHHHHHHHHHHhcCCCCceEEEEEEccC
Confidence            45679999999999999999999984  323666664443

>PRK11064 wecC UDP-N-acetyl-D-mannosamine dehydrogenase; Provisional

Probab=90.91  E-value=0.32  Score=48.02  Aligned_cols=37  Identities=27%  Similarity=0.367  Sum_probs=32.2

Q ss_pred             ccCCeEEEEcCCChhHHHHHHHHHHcCCceEEEEecCCC
Q 017760            9 IEGKTFLVTGGLGHVGSALCLELVRRGAYQVRAFDLRTN   47 (366)
Q Consensus         9 ~~~~~VlITGgtGfiG~~L~~~L~~~g~~~V~~~dr~~~   47 (366)
                      |.+++|.|. |.|++|..++..|.+.| ++|+++|+++.
T Consensus         1 m~~~kI~VI-GlG~~G~~~A~~La~~G-~~V~~~D~~~~   37 (415)
T PRK11064          1 MSFETISVI-GLGYIGLPTAAAFASRQ-KQVIGVDINQH   37 (415)
T ss_pred             CCccEEEEE-CcchhhHHHHHHHHhCC-CEEEEEeCCHH
Confidence            345789998 78999999999999999 69999998764

>COG2085 Predicted dinucleotide-binding enzymes [General function prediction only]

Probab=90.87  E-value=0.34  Score=42.77  Aligned_cols=36  Identities=31%  Similarity=0.316  Sum_probs=29.9

Q ss_pred             CCeEEEEcCCChhHHHHHHHHHHcCCceEEEEecCCCC
Q 017760           11 GKTFLVTGGLGHVGSALCLELVRRGAYQVRAFDLRTNS   48 (366)
Q Consensus        11 ~~~VlITGgtGfiG~~L~~~L~~~g~~~V~~~dr~~~~   48 (366)
                      ||++. .||+|.+|+.|++.|.+.| |+|+.-.++.++
T Consensus         1 m~~~~-i~GtGniG~alA~~~a~ag-~eV~igs~r~~~   36 (211)
T COG2085           1 MMIIA-IIGTGNIGSALALRLAKAG-HEVIIGSSRGPK   36 (211)
T ss_pred             CcEEE-EeccChHHHHHHHHHHhCC-CeEEEecCCChh
Confidence            34555 4799999999999999999 699999777664

>PRK12548 shikimate 5-dehydrogenase; Provisional

Probab=90.76  E-value=0.46  Score=44.51  Aligned_cols=37  Identities=24%  Similarity=0.540  Sum_probs=32.2

Q ss_pred             ccCCeEEEEcCCChhHHHHHHHHHHcCCceEEEEecCC
Q 017760            9 IEGKTFLVTGGLGHVGSALCLELVRRGAYQVRAFDLRT   46 (366)
Q Consensus         9 ~~~~~VlITGgtGfiG~~L~~~L~~~g~~~V~~~dr~~   46 (366)
                      .++++++|||+ |-+|++++..|.+.|..+|++++|+.
T Consensus       124 ~~~k~vlI~GA-GGagrAia~~La~~G~~~V~I~~R~~  160 (289)
T PRK12548        124 VKGKKLTVIGA-GGAATAIQVQCALDGAKEITIFNIKD  160 (289)
T ss_pred             cCCCEEEEECC-cHHHHHHHHHHHHCCCCEEEEEeCCc
Confidence            45678999998 79999999999999975699999875

>cd01337 MDH_glyoxysomal_mitochondrial Glyoxysomal and mitochondrial malate dehydrogenases

Probab=90.70  E-value=0.41  Score=45.29  Aligned_cols=78  Identities=18%  Similarity=0.170  Sum_probs=49.1

Q ss_pred             CeEEEEcCCChhHHHHHHHHHHcCC-ceEEEEecCCCCcccccccCC--CeEEEE--ccc--cCCCCCceEEEEeCCccc
Q 017760           12 KTFLVTGGLGHVGSALCLELVRRGA-YQVRAFDLRTNSPWSHLLINH--GVHCIQ--GLR--KNNRKCLYTCAVRPAAIY   84 (366)
Q Consensus        12 ~~VlITGgtGfiG~~L~~~L~~~g~-~~V~~~dr~~~~~~~~~~~~~--~v~~i~--gDk--s~~~~~l~~~ilRp~~iy   84 (366)
                      +||.|+|++|.+|+.++..|...+. .++.++|++.......++.+.  ......  +|.  ...-.+-+.+++=.+.--
T Consensus         1 ~KI~IIGaaG~VG~~~a~~l~~~~~~~elvLiDi~~a~g~alDL~~~~~~~~i~~~~~~~~~y~~~~daDivvitaG~~~   80 (310)
T cd01337           1 VKVAVLGAAGGIGQPLSLLLKLNPLVSELALYDIVNTPGVAADLSHINTPAKVTGYLGPEELKKALKGADVVVIPAGVPR   80 (310)
T ss_pred             CEEEEECCCCHHHHHHHHHHHhCCCCcEEEEEecCccceeehHhHhCCCcceEEEecCCCchHHhcCCCCEEEEeCCCCC
Confidence            5899999999999999999988873 589999998222222222221  122221  321  233445667777666666


Q ss_pred             cCCCC
Q 017760           85 GPGEE   89 (366)
Q Consensus        85 Gp~~~   89 (366)
                      .|++.
T Consensus        81 k~g~t   85 (310)
T cd01337          81 KPGMT   85 (310)
T ss_pred             CCCCC
Confidence            67664

MDH is one of the key enzymes in the citric acid cycle, facilitating both the conversion of malate to oxaloacetate and replenishing levels of oxalacetate by reductive carboxylation of pyruvate. Members of this subfamily are localized to the glycosome and mitochondria. MDHs are part of the NAD(P)-binding Rossmann fold superfamily, which includes a wide variety of protein families including the NAD(P)-binding domains of alcohol dehydrogenases, tyrosine-dependent oxidoreductases, glyceraldehyde-3-phosphate dehydrogenases, formate/glycerate dehydrogenases, siroheme synthases, 6-phosphogluconate dehydrogenases, aminoacid dehydrogenases, repressor rex, and NAD-binding potassium channel domains, among others.

>COG0039 Mdh Malate/lactate dehydrogenases [Energy production and conversion]

Probab=90.60  E-value=3.7  Score=38.79  Aligned_cols=76  Identities=22%  Similarity=0.245  Sum_probs=48.1

Q ss_pred             CeEEEEcCCChhHHHHHHHHHHcCCc-eEEEEecCCCCccc--ccccC------CCeEEEEcc-ccCCCCCceEEEEeCC
Q 017760           12 KTFLVTGGLGHVGSALCLELVRRGAY-QVRAFDLRTNSPWS--HLLIN------HGVHCIQGL-RKNNRKCLYTCAVRPA   81 (366)
Q Consensus        12 ~~VlITGgtGfiG~~L~~~L~~~g~~-~V~~~dr~~~~~~~--~~~~~------~~v~~i~gD-ks~~~~~l~~~ilRp~   81 (366)
                      +||.|+|+ |.+|+.++..|..++.. +++++|+......-  .++.+      .+. .+.+| ....-.+-+.+++=-+
T Consensus         1 ~KVaviGa-G~VG~s~a~~l~~~~~~~el~LiDi~~~~~~G~a~DL~~~~~~~~~~~-~i~~~~~y~~~~~aDiVvitAG   78 (313)
T COG0039           1 MKVAVIGA-GNVGSSLAFLLLLQGLGSELVLIDINEEKAEGVALDLSHAAAPLGSDV-KITGDGDYEDLKGADIVVITAG   78 (313)
T ss_pred             CeEEEECC-ChHHHHHHHHHhcccccceEEEEEcccccccchhcchhhcchhccCce-EEecCCChhhhcCCCEEEEeCC
Confidence            57999999 99999999999888754 89999999433221  11111      111 22221 1233345667777666


Q ss_pred             ccccCCCC
Q 017760           82 AIYGPGEE   89 (366)
Q Consensus        82 ~iyGp~~~   89 (366)
                      .-=.||..
T Consensus        79 ~prKpGmt   86 (313)
T COG0039          79 VPRKPGMT   86 (313)
T ss_pred             CCCCCCCC
Confidence            66677754

>PRK08818 prephenate dehydrogenase; Provisional

Probab=90.29  E-value=0.52  Score=45.72  Aligned_cols=36  Identities=25%  Similarity=0.217  Sum_probs=31.4

Q ss_pred             ccCCeEEEEcCCChhHHHHHHHHHHc-CCceEEEEecC
Q 017760            9 IEGKTFLVTGGLGHVGSALCLELVRR-GAYQVRAFDLR   45 (366)
Q Consensus         9 ~~~~~VlITGgtGfiG~~L~~~L~~~-g~~~V~~~dr~   45 (366)
                      ...++|.|.|++|.+|..+++.|.+. + ++|+++|+.
T Consensus         2 ~~~~~I~IIGl~GliGgslA~alk~~~~-~~V~g~D~~   38 (370)
T PRK08818          2 IAQPVVGIVGSAGAYGRWLARFLRTRMQ-LEVIGHDPA   38 (370)
T ss_pred             CCCCEEEEECCCCHHHHHHHHHHHhcCC-CEEEEEcCC
Confidence            34579999999999999999999975 6 589999975

>cd00704 MDH Malate dehydrogenase

Probab=90.16  E-value=0.42  Score=45.56  Aligned_cols=34  Identities=21%  Similarity=0.354  Sum_probs=29.5

Q ss_pred             eEEEEcCCChhHHHHHHHHHHcCC-c-----eEEEEecCC
Q 017760           13 TFLVTGGLGHVGSALCLELVRRGA-Y-----QVRAFDLRT   46 (366)
Q Consensus        13 ~VlITGgtGfiG~~L~~~L~~~g~-~-----~V~~~dr~~   46 (366)
                      ||.|||++|.+|+.++..|...|. .     +++.+|+++
T Consensus         2 KV~IiGAaG~VG~~~a~~L~~~~~~~~~~~~~l~L~Di~~   41 (323)
T cd00704           2 HVLITGAAGQIGYNLLFLIASGELFGDDQPVILHLLDIPP   41 (323)
T ss_pred             EEEEECCCcHHHHHHHHHHHhCCccCCCCceEEEEEecCC
Confidence            799999999999999999998663 2     499999986

Malate dehydrogenase (MDH) is one of the key enzymes in the citric acid cycle, facilitating both the conversion of malate to oxaloacetate and replenishing levels of oxalacetate by reductive carboxylation of pyruvate. MDHs belong to the NAD-dependent, lactate dehydrogenase (LDH)-like, 2-hydroxycarboxylate dehydrogenase family, which also includes the GH4 family of glycoside hydrolases. They are part of the NAD(P)-binding Rossmann fold superfamily, which includes a wide variety of protein families including the NAD(P)-binding domains of alcohol dehydrogenases, tyrosine-dependent oxidoreductases, glyceraldehyde-3-phosphate dehydrogenases, formate/glycerate dehydrogenases, siroheme synthases, 6-phosphogluconate dehydrogenases, aminoacid dehydrogenases, repressor rex, and NAD-binding potassium channel domains, among others.

>cd01065 NAD_bind_Shikimate_DH NAD(P) binding domain of Shikimate dehydrogenase

Probab=89.81  E-value=0.6  Score=38.87  Aligned_cols=38  Identities=24%  Similarity=0.419  Sum_probs=31.6

Q ss_pred             ccCCeEEEEcCCChhHHHHHHHHHHcCCceEEEEecCCC
Q 017760            9 IEGKTFLVTGGLGHVGSALCLELVRRGAYQVRAFDLRTN   47 (366)
Q Consensus         9 ~~~~~VlITGgtGfiG~~L~~~L~~~g~~~V~~~dr~~~   47 (366)
                      .+.++|+|+|+ |.+|..+++.|.+.|.++|.+.++++.
T Consensus        17 ~~~~~i~iiG~-G~~g~~~a~~l~~~g~~~v~v~~r~~~   54 (155)
T cd01065          17 LKGKKVLILGA-GGAARAVAYALAELGAAKIVIVNRTLE   54 (155)
T ss_pred             CCCCEEEEECC-cHHHHHHHHHHHHCCCCEEEEEcCCHH
Confidence            34678999987 999999999999986458999988753

Shikimate dehydrogenase (DH) is an amino acid DH family member. Shikimate pathway links metabolism of carbohydrates to de novo biosynthesis of aromatic amino acids, quinones and folate. It is essential in plants, bacteria, and fungi but absent in mammals, thus making enzymes involved in this pathway ideal targets for broad spectrum antibiotics and herbicides. Shikimate DH catalyzes the reduction of 3-hydroshikimate to shikimate using the cofactor NADH. Amino acid DH-like NAD(P)-binding domains are members of the Rossmann fold superfamily and include glutamate, leucine, and phenylalanine DHs, methylene tetrahydrofolate DH, methylene-tetrahydromethanopterin DH, methylene-tetrahydropholate DH/cyclohydrolase, Shikimate DH-like proteins, malate oxidoreductases, and glutamyl tRNA reductase. Amino acid DHs catalyze the deamination of amino acids to keto acids with NAD(P)+ as a cofactor. The NAD(P)-binding Rossmann

>PF03435 Saccharop_dh: Saccharopine dehydrogenase ; InterPro: IPR005097 This entry represents saccharopine dehydrogenase and homospermidine synthase

Probab=89.74  E-value=0.28  Score=47.83  Aligned_cols=51  Identities=33%  Similarity=0.458  Sum_probs=35.9

Q ss_pred             EEEEcCCChhHHHHHHHHHHcCCc-eEEEEecCCCCccc--ccccCCCeEEEEcc
Q 017760           14 FLVTGGLGHVGSALCLELVRRGAY-QVRAFDLRTNSPWS--HLLINHGVHCIQGL   65 (366)
Q Consensus        14 VlITGgtGfiG~~L~~~L~~~g~~-~V~~~dr~~~~~~~--~~~~~~~v~~i~gD   65 (366)
                      |+|.|| |++|+.+++.|.+.+-. +|++.||+......  .......++.++.|
T Consensus         1 IlvlG~-G~vG~~~~~~L~~~~~~~~v~va~r~~~~~~~~~~~~~~~~~~~~~~d   54 (386)
T PF03435_consen    1 ILVLGA-GRVGSAIARLLARRGPFEEVTVADRNPEKAERLAEKLLGDRVEAVQVD   54 (386)
T ss_dssp             EEEE---SHHHHHHHHHHHCTTCE-EEEEEESSHHHHHHHHT--TTTTEEEEE--
T ss_pred             CEEEcC-cHHHHHHHHHHhcCCCCCcEEEEECCHHHHHHHHhhccccceeEEEEe
Confidence            789999 99999999999998744 79999998754321  11145688999988

Saccharopine reductase (SR) 1.5.1.10 from EC) catalyses the condensation of l-alpha-aminoadipate-delta-semialdehyde (AASA) with l-glutamate to give an imine, which is reduced by NADPH to give saccharopine []. In some organisms this enzyme is found as a bifunctional polypeptide with lysine ketoglutarate reductase (PF). Saccharopine dehydrogenase can also function as a saccharopine reductase. Homospermidine synthase proteins (2.5.1.44 from EC). Homospermidine synthase (HSS) catalyses the synthesis of the polyamine homospermidine from 2 mol putrescine in an NAD+-dependent reaction [].; GO: 0016491 oxidoreductase activity, 0055114 oxidation-reduction process; PDB: 2AXQ_A 1E5Q_A 1FF9_A 1E5L_A 2PH5_A 3IC5_A 3ABI_A.

>PLN02383 aspartate semialdehyde dehydrogenase

Probab=89.68  E-value=1.2  Score=42.81  Aligned_cols=25  Identities=28%  Similarity=0.434  Sum_probs=22.9

Q ss_pred             CCeEEEEcCCChhHHHHHHHHHHcC
Q 017760           11 GKTFLVTGGLGHVGSALCLELVRRG   35 (366)
Q Consensus        11 ~~~VlITGgtGfiG~~L~~~L~~~g   35 (366)
                      .++|.|.||||++|..|++.|.+++
T Consensus         7 ~~kVaVvGAtG~vG~eLlrlL~~~~   31 (344)
T PLN02383          7 GPSVAIVGVTGAVGQEFLSVLTDRD   31 (344)
T ss_pred             CCeEEEEcCCChHHHHHHHHHHhCC
Confidence            3689999999999999999999876

>PRK05442 malate dehydrogenase; Provisional

Probab=89.65  E-value=0.69  Score=44.12  Aligned_cols=38  Identities=16%  Similarity=0.287  Sum_probs=32.0

Q ss_pred             cCCeEEEEcCCChhHHHHHHHHHHcCC-c-----eEEEEecCCC
Q 017760           10 EGKTFLVTGGLGHVGSALCLELVRRGA-Y-----QVRAFDLRTN   47 (366)
Q Consensus        10 ~~~~VlITGgtGfiG~~L~~~L~~~g~-~-----~V~~~dr~~~   47 (366)
                      ++.||.|+|++|.+|+.++..|...+. .     ++..+|+++.
T Consensus         3 ~~~KV~IiGaaG~VG~~~a~~l~~~~~~~~~~~~el~LiDi~~~   46 (326)
T PRK05442          3 APVRVAVTGAAGQIGYSLLFRIASGDMLGKDQPVILQLLEIPPA   46 (326)
T ss_pred             CCcEEEEECCCcHHHHHHHHHHHhhhhcCCCCccEEEEEecCCc
Confidence            457999999999999999999988763 3     7999998654

>PF02737 3HCDH_N: 3-hydroxyacyl-CoA dehydrogenase, NAD binding domain; InterPro: IPR006176 3-hydroxyacyl-CoA dehydrogenase (1

Probab=89.55  E-value=0.48  Score=41.07  Aligned_cols=33  Identities=27%  Similarity=0.563  Sum_probs=27.6

Q ss_pred             eEEEEcCCChhHHHHHHHHHHcCCceEEEEecCCC
Q 017760           13 TFLVTGGLGHVGSALCLELVRRGAYQVRAFDLRTN   47 (366)
Q Consensus        13 ~VlITGgtGfiG~~L~~~L~~~g~~~V~~~dr~~~   47 (366)
                      +|.|.|+ |.+|+.++..++..| ++|+..|+++.
T Consensus         1 ~V~ViGa-G~mG~~iA~~~a~~G-~~V~l~d~~~~   33 (180)
T PF02737_consen    1 KVAVIGA-GTMGRGIAALFARAG-YEVTLYDRSPE   33 (180)
T ss_dssp             EEEEES--SHHHHHHHHHHHHTT-SEEEEE-SSHH
T ss_pred             CEEEEcC-CHHHHHHHHHHHhCC-CcEEEEECChH
Confidence            5788866 999999999999999 59999998753

1.1.35 from EC) (HCDH) [] is an enzyme involved in fatty acid metabolism, it catalyzes the reduction of 3-hydroxyacyl-CoA to 3-oxoacyl-CoA. Most eukaryotic cells have 2 fatty-acid beta-oxidation systems, one located in mitochondria and the other in peroxisomes. In peroxisomes 3-hydroxyacyl-CoA dehydrogenase forms, with enoyl-CoA hydratase (ECH) and 3,2-trans-enoyl-CoA isomerase (ECI) a multifunctional enzyme where the N-terminal domain bears the hydratase/isomerase activities and the C-terminal domain the dehydrogenase activity. There are two mitochondrial enzymes: one which is monofunctional and the other which is, like its peroxisomal counterpart, multifunctional. In Escherichia coli (gene fadB) and Pseudomonas fragi (gene faoA) HCDH is part of a multifunctional enzyme which also contains an ECH/ECI domain as well as a 3-hydroxybutyryl-CoA epimerase domain []. There are two major regions of similarity in the sequences of proteins of the HCDH family, the first one located in the N-terminal, corresponds to the NAD-binding site, the second one is located in the centre of the sequence. This represents the C-terminal domain which is also found in lambda crystallin. Some proteins include two copies of this domain.; GO: 0003857 3-hydroxyacyl-CoA dehydrogenase activity, 0016491 oxidoreductase activity, 0006631 fatty acid metabolic process, 0055114 oxidation-reduction process; PDB: 3K6J_A 1ZCJ_A 2X58_A 1ZEJ_A 3HDH_B 2WTB_A 1WDL_B 2D3T_B 1WDK_A 1WDM_B ....

>PF03446 NAD_binding_2: NAD binding domain of 6-phosphogluconate dehydrogenase; InterPro: IPR006115 6-Phosphogluconate dehydrogenase (1

Probab=89.50  E-value=0.61  Score=39.58  Aligned_cols=35  Identities=31%  Similarity=0.558  Sum_probs=29.0

Q ss_pred             CCeEEEEcCCChhHHHHHHHHHHcCCceEEEEecCCC
Q 017760           11 GKTFLVTGGLGHVGSALCLELVRRGAYQVRAFDLRTN   47 (366)
Q Consensus        11 ~~~VlITGgtGfiG~~L~~~L~~~g~~~V~~~dr~~~   47 (366)
                      |++|.+. |.|-+|+.+++.|.+.| ++|.+.||++.
T Consensus         1 m~~Ig~I-GlG~mG~~~a~~L~~~g-~~v~~~d~~~~   35 (163)
T PF03446_consen    1 MMKIGFI-GLGNMGSAMARNLAKAG-YEVTVYDRSPE   35 (163)
T ss_dssp             -BEEEEE---SHHHHHHHHHHHHTT-TEEEEEESSHH
T ss_pred             CCEEEEE-chHHHHHHHHHHHHhcC-CeEEeeccchh
Confidence            5789888 56999999999999999 59999998853

1.1.44 from EC) (6PGD) is an oxidative carboxylase that catalyses the decarboxylating reduction of 6-phosphogluconate into ribulose 5-phosphate in the presence of NADP. This reaction is a component of the hexose mono-phosphate shunt and pentose phosphate pathways (PPP) [, ]. Prokaryotic and eukaryotic 6PGD are proteins of about 470 amino acids whose sequence are highly conserved []. The protein is a homodimer in which the monomers act independently []: each contains a large, mainly alpha-helical domain and a smaller beta-alpha-beta domain, containing a mixed parallel and anti-parallel 6-stranded beta sheet []. NADP is bound in a cleft in the small domain, the substrate binding in an adjacent pocket []. This family represents the NADP binding domain of 6-phosphogluconate dehydrogenase which adopts a Rossman fold. The C-terminal domain is described in IPR006114 from INTERPRO.; GO: 0004616 phosphogluconate dehydrogenase (decarboxylating) activity, 0006098 pentose-phosphate shunt, 0055114 oxidation-reduction process; PDB: 3AX6_D 3PDU_G 3Q3C_A 3OBB_A 4DLL_B 1PGP_A 1PGN_A 2PGD_A 1PGQ_A 1PGO_A ....

>PRK06444 prephenate dehydrogenase; Provisional

Probab=89.32  E-value=0.49  Score=41.67  Aligned_cols=28  Identities=29%  Similarity=0.420  Sum_probs=25.6

Q ss_pred             CeEEEEcCCChhHHHHHHHHHHcCCceEE
Q 017760           12 KTFLVTGGLGHVGSALCLELVRRGAYQVR   40 (366)
Q Consensus        12 ~~VlITGgtGfiG~~L~~~L~~~g~~~V~   40 (366)
                      |+|.|.||+|-+|+.+++.|.+.|+ .|.
T Consensus         1 ~~~~iiG~~G~mG~~~~~~~~~~g~-~v~   28 (197)
T PRK06444          1 MMEIIIGKNGRLGRVLCSILDDNGL-GVY   28 (197)
T ss_pred             CEEEEEecCCcHHHHHHHHHHhCCC-EEE
Confidence            4899999999999999999999994 786

>TIGR02114 coaB_strep phosphopantothenate--cysteine ligase, streptococcal

Probab=89.27  E-value=0.49  Score=42.67  Aligned_cols=27  Identities=19%  Similarity=0.389  Sum_probs=23.4

Q ss_pred             cCCChhHHHHHHHHHHcCCceEEEEecC
Q 017760           18 GGLGHVGSALCLELVRRGAYQVRAFDLR   45 (366)
Q Consensus        18 GgtGfiG~~L~~~L~~~g~~~V~~~dr~   45 (366)
                      .++|.+|.++++.|.++|+ +|+++++.
T Consensus        22 ~SSGgIG~AIA~~la~~Ga-~Vvlv~~~   48 (227)
T TIGR02114        22 HSTGHLGKIITETFLSAGH-EVTLVTTK   48 (227)
T ss_pred             CcccHHHHHHHHHHHHCCC-EEEEEcCh
Confidence            4589999999999999995 89998753

In most bacteria, a single bifunctional protein catalyses phosphopantothenoylcysteine decarboxylase and phosphopantothenate--cysteine ligase activities, sequential steps in coenzyme A biosynthesis (see TIGR00521). These activities reside in separate proteins encoded by tandem genes in some bacterial lineages. This model describes proteins from the genera Streptococcus and Enterococcus homologous to the C-terminal region of TIGR00521, corresponding to phosphopantothenate--cysteine ligase activity.

>cd01485 E1-1_like Ubiquitin activating enzyme (E1), repeat 1-like

Probab=89.10  E-value=0.39  Score=42.32  Aligned_cols=38  Identities=21%  Similarity=0.350  Sum_probs=33.1

Q ss_pred             cccCCeEEEEcCCChhHHHHHHHHHHcCCceEEEEecCC
Q 017760            8 GIEGKTFLVTGGLGHVGSALCLELVRRGAYQVRAFDLRT   46 (366)
Q Consensus         8 ~~~~~~VlITGgtGfiG~~L~~~L~~~g~~~V~~~dr~~   46 (366)
                      ..+..+|+|.|.+| +|+.+++.|...|..+++.+|...
T Consensus        16 ~L~~s~VlviG~gg-lGsevak~L~~~GVg~i~lvD~d~   53 (198)
T cd01485          16 KLRSAKVLIIGAGA-LGAEIAKNLVLAGIDSITIVDHRL   53 (198)
T ss_pred             HHhhCcEEEECCCH-HHHHHHHHHHHcCCCEEEEEECCc
Confidence            34567899998888 999999999999998899998765

E1, a highly conserved small protein present universally in eukaryotic cells, is part of cascade to attach ubiquitin (Ub) covalently to substrate proteins. This cascade consists of activating (E1), conjugating (E2), and/or ligating (E3) enzymes and then targets them for degradation by the 26S proteasome. E1 activates ubiquitin by C-terminal adenylation, and subsequently forms a highly reactive thioester bond between its catalytic cysteine and ubiquitin's C-terminus. The E1 also associates with E2 and promotes ubiquitin transfer to the E2's catalytic cysteine. A set of novel molecules with a structural similarity to Ub, called Ub-like proteins (Ubls), have similar conjugation cascades. In contrast to ubiquitin-E1, which is a single-chain protein with a weakly conserved two-fold repeat, many of the Ubls-E1are a heterodimer where each subunit corresponds to one half of a single-chain E1. This CD represents the family homol

>PRK05086 malate dehydrogenase; Provisional

Probab=89.03  E-value=0.55  Score=44.49  Aligned_cols=36  Identities=25%  Similarity=0.350  Sum_probs=29.1

Q ss_pred             CeEEEEcCCChhHHHHHHHHHH-cC-CceEEEEecCCC
Q 017760           12 KTFLVTGGLGHVGSALCLELVR-RG-AYQVRAFDLRTN   47 (366)
Q Consensus        12 ~~VlITGgtGfiG~~L~~~L~~-~g-~~~V~~~dr~~~   47 (366)
                      |||+|.||+|.+|++++..|.. .+ .++++++|+++.
T Consensus         1 ~KI~IIGAsG~VG~aia~~l~~~~~~~~el~L~d~~~~   38 (312)
T PRK05086          1 MKVAVLGAAGGIGQALALLLKTQLPAGSELSLYDIAPV   38 (312)
T ss_pred             CEEEEECCCCHHHHHHHHHHHcCCCCccEEEEEecCCC
Confidence            5899999999999999998854 22 257899998743

>TIGR01296 asd_B aspartate-semialdehyde dehydrogenase (peptidoglycan organisms)

Probab=88.95  E-value=0.64  Score=44.61  Aligned_cols=27  Identities=22%  Similarity=0.447  Sum_probs=23.1

Q ss_pred             eEEEEcCCChhHHHHHHHHHHcCCceEE
Q 017760           13 TFLVTGGLGHVGSALCLELVRRGAYQVR   40 (366)
Q Consensus        13 ~VlITGgtGfiG~~L~~~L~~~g~~~V~   40 (366)
                      +|.|.||||++|..|++.|.+++ |.+.
T Consensus         1 ~VaIvGAtG~vG~eLi~lL~~~~-hp~~   27 (339)
T TIGR01296         1 NVAIVGATGAVGQEMLKILEERN-FPID   27 (339)
T ss_pred             CEEEEcCCCHHHHHHHHHHHhCC-CChh
Confidence            58999999999999999999977 3433

Two closely related families of aspartate-semialdehyde dehydrogenase are found. They differ by a deep split in phylogenetic and percent identity trees and in gap patterns. This model represents a branch more closely related to the USG-1 protein than to the other aspartate-semialdehyde dehydrogenases represented in model TIGR00978.

>PRK14619 NAD(P)H-dependent glycerol-3-phosphate dehydrogenase; Provisional

Probab=88.86  E-value=0.89  Score=42.90  Aligned_cols=36  Identities=31%  Similarity=0.362  Sum_probs=31.5

Q ss_pred             CCeEEEEcCCChhHHHHHHHHHHcCCceEEEEecCCCC
Q 017760           11 GKTFLVTGGLGHVGSALCLELVRRGAYQVRAFDLRTNS   48 (366)
Q Consensus        11 ~~~VlITGgtGfiG~~L~~~L~~~g~~~V~~~dr~~~~   48 (366)
                      +|+|.|. |+|.+|++++..|.+.| ++|+..+|+...
T Consensus         4 ~m~I~ii-G~G~~G~~lA~~l~~~G-~~V~~~~r~~~~   39 (308)
T PRK14619          4 PKTIAIL-GAGAWGSTLAGLASANG-HRVRVWSRRSGL   39 (308)
T ss_pred             CCEEEEE-CccHHHHHHHHHHHHCC-CEEEEEeCCCCC
Confidence            4689888 78999999999999999 699999987653

>PLN02256 arogenate dehydrogenase

Probab=88.82  E-value=0.7  Score=43.64  Aligned_cols=38  Identities=24%  Similarity=0.304  Sum_probs=32.8

Q ss_pred             ccccCCeEEEEcCCChhHHHHHHHHHHcCCceEEEEecCC
Q 017760            7 EGIEGKTFLVTGGLGHVGSALCLELVRRGAYQVRAFDLRT   46 (366)
Q Consensus         7 ~~~~~~~VlITGgtGfiG~~L~~~L~~~g~~~V~~~dr~~   46 (366)
                      +.+.+++|.|.| .|.+|..+++.|.+.| ++|+++++++
T Consensus        32 ~~~~~~kI~IIG-~G~mG~slA~~L~~~G-~~V~~~d~~~   69 (304)
T PLN02256         32 EKSRKLKIGIVG-FGNFGQFLAKTFVKQG-HTVLATSRSD   69 (304)
T ss_pred             ccCCCCEEEEEe-eCHHHHHHHHHHHhCC-CEEEEEECcc
Confidence            345678999997 7999999999999999 5899999875

>TIGR00978 asd_EA aspartate-semialdehyde dehydrogenase (non-peptidoglycan organisms)

Probab=88.57  E-value=0.66  Score=44.55  Aligned_cols=31  Identities=19%  Similarity=0.304  Sum_probs=26.3

Q ss_pred             CeEEEEcCCChhHHHHHHHHHHcCCceEEEE
Q 017760           12 KTFLVTGGLGHVGSALCLELVRRGAYQVRAF   42 (366)
Q Consensus        12 ~~VlITGgtGfiG~~L~~~L~~~g~~~V~~~   42 (366)
                      ++|.|+|++|++|+.|++.|.+....++..+
T Consensus         1 ~kVaIvGatG~~G~~L~~~l~~~~~~~l~~v   31 (341)
T TIGR00978         1 MRVAVLGATGLVGQKFVKLLAKHPYFELAKV   31 (341)
T ss_pred             CEEEEECCCCHHHHHHHHHHHhCCCceEEEE
Confidence            4799999999999999999988763377777

Two closely related families of aspartate-semialdehyde dehydrogenase are found. They differ by a deep split in phylogenetic and percent identity trees and in gap patterns. Separate models are built for the two types in order to exclude the USG-1 protein, found in several species, which is specifically related to the Bacillus subtilis type of aspartate-semialdehyde dehydrogenase. Members of this type are found primarily in organisms that lack peptidoglycan.

>cd01080 NAD_bind_m-THF_DH_Cyclohyd NADP binding domain of methylene-tetrahydrofolate dehydrogenase/cyclohydrolase

Probab=88.49  E-value=0.93  Score=38.85  Aligned_cols=37  Identities=32%  Similarity=0.453  Sum_probs=32.6

Q ss_pred             ccCCeEEEEcCCChhHHHHHHHHHHcCCceEEEEecCC
Q 017760            9 IEGKTFLVTGGLGHVGSALCLELVRRGAYQVRAFDLRT   46 (366)
Q Consensus         9 ~~~~~VlITGgtGfiG~~L~~~L~~~g~~~V~~~dr~~   46 (366)
                      ..+++|+|.|+++.+|..+++.|.++|. +|...+|+.
T Consensus        42 l~gk~vlViG~G~~~G~~~a~~L~~~g~-~V~v~~r~~   78 (168)
T cd01080          42 LAGKKVVVVGRSNIVGKPLAALLLNRNA-TVTVCHSKT   78 (168)
T ss_pred             CCCCEEEEECCcHHHHHHHHHHHhhCCC-EEEEEECCc
Confidence            5679999999988899999999999996 799998764

NADP binding domain of the Methylene-Tetrahydrofolate Dehydrogenase/cyclohydrolase (m-THF DH/cyclohydrolase) bifunctional enzyme. Tetrahydrofolate is a versatile carrier of activated one-carbon units. The major one-carbon folate donors are N-5 methyltetrahydrofolate, N5,N10-m-THF, and N10-formayltetrahydrofolate. The oxidation of metabolic intermediate m-THF to m-THF requires the enzyme m-THF DH. In addition, most DHs also have an associated cyclohydrolase activity which catalyzes its hydrolysis to N10-formyltetrahydrofolate. m-THF DH is typically found as part of a multifunctional protein in eukaryotes. NADP-dependent m-THF DH in mammals, birds and yeast are components of a trifunctional enzyme with DH, cyclohydrolase, and synthetase activities. Certain eukaryotic cells also contain homodimeric bifunctional DH/cyclodrolase form. In bacteria, monofucntional DH, as well a

>PF02254 TrkA_N: TrkA-N domain; InterPro: IPR003148 The regulator of K+ conductance (RCK) domain is found in many ligand-gated K+ channels, most often attached to the intracellular carboxy terminus

Probab=88.41  E-value=0.43  Score=37.66  Aligned_cols=48  Identities=25%  Similarity=0.376  Sum_probs=33.9

Q ss_pred             EEEEcCCChhHHHHHHHHHHcCCceEEEEecCCCCcccccccCCCeEEEEcc
Q 017760           14 FLVTGGLGHVGSALCLELVRRGAYQVRAFDLRTNSPWSHLLINHGVHCIQGL   65 (366)
Q Consensus        14 VlITGgtGfiG~~L~~~L~~~g~~~V~~~dr~~~~~~~~~~~~~~v~~i~gD   65 (366)
                      |+|.|. |-+|..+++.|.+.+ .+|++++.++...  ......++.++.||
T Consensus         1 vvI~G~-g~~~~~i~~~L~~~~-~~vvvid~d~~~~--~~~~~~~~~~i~gd   48 (116)
T PF02254_consen    1 VVIIGY-GRIGREIAEQLKEGG-IDVVVIDRDPERV--EELREEGVEVIYGD   48 (116)
T ss_dssp             EEEES--SHHHHHHHHHHHHTT-SEEEEEESSHHHH--HHHHHTTSEEEES-
T ss_pred             eEEEcC-CHHHHHHHHHHHhCC-CEEEEEECCcHHH--HHHHhccccccccc
Confidence            567755 789999999999977 4899999876432  33334557777777

The domain is prevalent among prokaryotic K+ channels, and also found in eukaryotic, high-conductance Ca2+-activated K+ channels (BK channels) [, , ]. Largely involved in redox-linked regulation of potassium channels, the N-terminal part of the RCK domain is predicted to be an active dehydrogenase at least in some cases []. Some have a conserved sequence motif (G-x-G-x-x-G-x(n)-[DE]) for NAD+ binding [], but others do not, reflecting the diversity of ligands for RCK domains. The C-terminal part is less conserved, being absent in some channels, such as the kefC antiporter from Escherichia coli. It is predicted to bind unidentified ligands and to regulate sulphate, sodium and other transporters. The X-ray structure of several RCK domains has been solved [, , ]. It reveals an alpha-beta fold similar to dehydrogenase enzymes. The domain forms a homodimer, producing a cleft between two lobes. It has a composite structure, with an N-terminal (RCK-N), and a C-terminal (RCK-C) subdomain. The RCK-N subdomain forms a Rossmann fold with two alpha helices on one side of a six stranded parallel beta sheet and three alpha helices on the other side. The RCK-C subdomain is an all-beta-strand fold. It forms an extention of the dimer interface and further stabilises the RCK homodimer [, , ]. Ca2+ is a ligand that opens the channel in a concentration-dependent manner. Two Ca2+ ions are located at the base of a cleft between two RCK domains, coordinated by the carboxylate groups of two glutamate residues, and by an aspartate residue [, , ]. RCK domains occur in at least five different contexts: As a single domain on the C terminus of some K+ channels (for example, many prokaryotic K+ channels). As two tandem RCK domains on the C terminus of some transporters that form gating rings (for example, eukaryotic BK channels). The gating ring has an arrangement of eight identical RCK domains, one from each of the four pore-forming subunits and four from the intracellular solution. As two domains, one at the N terminus and another at the C terminus of transporter (for example, the prokaryotic trk system potassium uptake protein A). As a soluble protein (not part of a K+ channel) consisting of two tandem RCK domains. As a soluble protein consisting of a single RCK domain. This entry represents the N-terminal subdomain of RCK.; GO: 0006813 potassium ion transport; PDB: 3L4B_E 1LSS_C 3LLV_A 2FY8_D 2AEF_A 1LNQ_E 3RBX_C 3KXD_A 2AEJ_A 3RBZ_A ....

>TIGR01758 MDH_euk_cyt malate dehydrogenase, NAD-dependent

Probab=88.39  E-value=0.76  Score=43.81  Aligned_cols=36  Identities=25%  Similarity=0.380  Sum_probs=30.3

Q ss_pred             eEEEEcCCChhHHHHHHHHHHcCCc------eEEEEecCCCC
Q 017760           13 TFLVTGGLGHVGSALCLELVRRGAY------QVRAFDLRTNS   48 (366)
Q Consensus        13 ~VlITGgtGfiG~~L~~~L~~~g~~------~V~~~dr~~~~   48 (366)
                      +|.|+|++|.+|+.++..|...+..      +++++|+++..
T Consensus         1 ~V~IiGaaG~VG~~~a~~l~~~~~~~~~~e~el~LiD~~~~~   42 (324)
T TIGR01758         1 RVVVTGAAGQIGYALLPMIARGRMLGKDQPIILHLLDIPPAM   42 (324)
T ss_pred             CEEEECCCcHHHHHHHHHHHhccccCCCCccEEEEEecCCcc
Confidence            5899999999999999999986642      59999997654

This model represents the NAD-dependent cytosolic malate dehydrogenase from eukaryotes. The enzyme from pig has been studied by X-ray crystallography

>PLN02602 lactate dehydrogenase

Probab=88.37  E-value=1  Score=43.36  Aligned_cols=36  Identities=19%  Similarity=0.356  Sum_probs=30.7

Q ss_pred             CeEEEEcCCChhHHHHHHHHHHcCC-ceEEEEecCCCC
Q 017760           12 KTFLVTGGLGHVGSALCLELVRRGA-YQVRAFDLRTNS   48 (366)
Q Consensus        12 ~~VlITGgtGfiG~~L~~~L~~~g~-~~V~~~dr~~~~   48 (366)
                      +||.|+|+ |.+|+.++..|...+. .++.++|+++..
T Consensus        38 ~KI~IIGa-G~VG~~~a~~l~~~~l~~el~LiDi~~~~   74 (350)
T PLN02602         38 TKVSVVGV-GNVGMAIAQTILTQDLADELALVDVNPDK   74 (350)
T ss_pred             CEEEEECC-CHHHHHHHHHHHhCCCCCEEEEEeCCCch
Confidence            69999995 9999999999998773 579999997643

>TIGR01850 argC N-acetyl-gamma-glutamyl-phosphate reductase, common form

Probab=88.32  E-value=0.72  Score=44.41  Aligned_cols=35  Identities=17%  Similarity=0.243  Sum_probs=27.8

Q ss_pred             CeEEEEcCCChhHHHHHHHHHHcCCceEEEE-ecCC
Q 017760           12 KTFLVTGGLGHVGSALCLELVRRGAYQVRAF-DLRT   46 (366)
Q Consensus        12 ~~VlITGgtGfiG~~L~~~L~~~g~~~V~~~-dr~~   46 (366)
                      ++|.|.||||++|..+++.|.+....+++.+ +.+.
T Consensus         1 ~kVaIiGATG~vG~ellr~L~~hP~~el~~l~~s~~   36 (346)
T TIGR01850         1 IKVAIVGASGYTGGELLRLLLNHPEVEITYLVSSRE   36 (346)
T ss_pred             CEEEEECCCCHHHHHHHHHHHcCCCceEEEEeccch
Confidence            4799999999999999999998743477744 5443

This model represents the more common of two related families of N-acetyl-gamma-glutamyl-phosphate reductase, an enzyme catalyzing the third step or Arg biosynthesis from Glu. The two families differ by phylogeny, similarity clustering, and the gap architecture in a multiple sequence alignment. Bacterial members of this family tend to be found within Arg biosynthesis operons.

>cd01338 MDH_choloroplast_like Chloroplast-like malate dehydrogenases

Probab=88.32  E-value=0.94  Score=43.14  Aligned_cols=37  Identities=19%  Similarity=0.292  Sum_probs=31.5

Q ss_pred             CeEEEEcCCChhHHHHHHHHHHcCC-c-----eEEEEecCCCC
Q 017760           12 KTFLVTGGLGHVGSALCLELVRRGA-Y-----QVRAFDLRTNS   48 (366)
Q Consensus        12 ~~VlITGgtGfiG~~L~~~L~~~g~-~-----~V~~~dr~~~~   48 (366)
                      .||.|+|++|.+|+.++..|...|. .     +++++|+++..
T Consensus         3 ~KV~IiGa~G~VG~~~a~~l~~~~~~~~~~~~el~L~Di~~~~   45 (322)
T cd01338           3 VRVAVTGAAGQIGYSLLFRIASGEMFGPDQPVILQLLELPQAL   45 (322)
T ss_pred             eEEEEECCCcHHHHHHHHHHHhccccCCCCceEEEEEecCCcc
Confidence            5899999999999999999998774 3     69999996543

MDH is one of the key enzymes in the citric acid cycle, facilitating both the conversion of malate to oxaloacetate and replenishing levels of oxalacetate by reductive carboxylation of pyruvate. Members of this subfamily are bacterial MDHs, and plant MDHs localized to the choloroplasts. MDHs are part of the NAD(P)-binding Rossmann fold superfamily, which includes a wide variety of protein families including the NAD(P)-binding domains of alcohol dehydrogenases, tyrosine-dependent oxidoreductases, glyceraldehyde-3-phosphate dehydrogenases, formate/glycerate dehydrogenases, siroheme synthases, 6-phosphogluconate dehydrogenases, aminoacid dehydrogenases, repressor rex, and NAD-binding potassium channel domains, among others.

>PRK07819 3-hydroxybutyryl-CoA dehydrogenase; Validated

Probab=88.24  E-value=0.76  Score=42.97  Aligned_cols=37  Identities=22%  Similarity=0.315  Sum_probs=31.5

Q ss_pred             cCCeEEEEcCCChhHHHHHHHHHHcCCceEEEEecCCCC
Q 017760           10 EGKTFLVTGGLGHVGSALCLELVRRGAYQVRAFDLRTNS   48 (366)
Q Consensus        10 ~~~~VlITGgtGfiG~~L~~~L~~~g~~~V~~~dr~~~~   48 (366)
                      .+.+|.|.| +|.+|..++..++..| ++|+++|+++..
T Consensus         4 ~~~~V~ViG-aG~mG~~iA~~~a~~G-~~V~l~d~~~~~   40 (286)
T PRK07819          4 AIQRVGVVG-AGQMGAGIAEVCARAG-VDVLVFETTEEL   40 (286)
T ss_pred             CccEEEEEc-ccHHHHHHHHHHHhCC-CEEEEEECCHHH
Confidence            346899995 5999999999999999 599999998753

>PRK08293 3-hydroxybutyryl-CoA dehydrogenase; Validated

Probab=88.23  E-value=0.76  Score=42.89  Aligned_cols=35  Identities=26%  Similarity=0.514  Sum_probs=30.5

Q ss_pred             CCeEEEEcCCChhHHHHHHHHHHcCCceEEEEecCCC
Q 017760           11 GKTFLVTGGLGHVGSALCLELVRRGAYQVRAFDLRTN   47 (366)
Q Consensus        11 ~~~VlITGgtGfiG~~L~~~L~~~g~~~V~~~dr~~~   47 (366)
                      .++|.|.| +|.+|+.++..|.+.| ++|++.|+++.
T Consensus         3 ~~kIaViG-aG~mG~~iA~~la~~G-~~V~l~d~~~~   37 (287)
T PRK08293          3 IKNVTVAG-AGVLGSQIAFQTAFHG-FDVTIYDISDE   37 (287)
T ss_pred             ccEEEEEC-CCHHHHHHHHHHHhcC-CeEEEEeCCHH
Confidence            46899995 6999999999999999 59999998753

>PRK06718 precorrin-2 dehydrogenase; Reviewed

Probab=87.85  E-value=1.1  Score=39.60  Aligned_cols=35  Identities=23%  Similarity=0.517  Sum_probs=30.1

Q ss_pred             ccCCeEEEEcCCChhHHHHHHHHHHcCCceEEEEecC
Q 017760            9 IEGKTFLVTGGLGHVGSALCLELVRRGAYQVRAFDLR   45 (366)
Q Consensus         9 ~~~~~VlITGgtGfiG~~L~~~L~~~g~~~V~~~dr~   45 (366)
                      .++++|+|.|| |-+|...++.|++.|. +|+.++..
T Consensus         8 l~~k~vLVIGg-G~va~~ka~~Ll~~ga-~V~VIs~~   42 (202)
T PRK06718          8 LSNKRVVIVGG-GKVAGRRAITLLKYGA-HIVVISPE   42 (202)
T ss_pred             cCCCEEEEECC-CHHHHHHHHHHHHCCC-eEEEEcCC
Confidence            56789999976 9999999999999994 89988643

>TIGR01772 MDH_euk_gproteo malate dehydrogenase, NAD-dependent

Probab=87.81  E-value=0.8  Score=43.38  Aligned_cols=34  Identities=24%  Similarity=0.360  Sum_probs=30.2

Q ss_pred             eEEEEcCCChhHHHHHHHHHHcCC-ceEEEEecCC
Q 017760           13 TFLVTGGLGHVGSALCLELVRRGA-YQVRAFDLRT   46 (366)
Q Consensus        13 ~VlITGgtGfiG~~L~~~L~~~g~-~~V~~~dr~~   46 (366)
                      ||.|+|++|.+|+.++..|...+. .+++++|+++
T Consensus         1 KV~IiGaaG~VG~~~a~~l~~~~~~~elvL~Di~~   35 (312)
T TIGR01772         1 KVAVLGAAGGIGQPLSLLLKLQPYVSELSLYDIAG   35 (312)
T ss_pred             CEEEECCCCHHHHHHHHHHHhCCCCcEEEEecCCC
Confidence            589999999999999999988873 5799999987

Although malate dehydrogenases have in some cases been mistaken for lactate dehydrogenases due to the similarity of these two substrates and the apparent ease with which evolution can toggle these activities, critical residues have been identified which can discriminate between the two activities. At the time of the creation of this model no hits above the trusted cutoff contained critical residues typical of lactate dehydrogenases.

>PRK00066 ldh L-lactate dehydrogenase; Reviewed

Probab=87.76  E-value=1.1  Score=42.46  Aligned_cols=39  Identities=23%  Similarity=0.445  Sum_probs=32.6

Q ss_pred             ccCCeEEEEcCCChhHHHHHHHHHHcCC-ceEEEEecCCCC
Q 017760            9 IEGKTFLVTGGLGHVGSALCLELVRRGA-YQVRAFDLRTNS   48 (366)
Q Consensus         9 ~~~~~VlITGgtGfiG~~L~~~L~~~g~-~~V~~~dr~~~~   48 (366)
                      ..++||.|+|+ |.+|+.++..|...|. .++..+|++...
T Consensus         4 ~~~~ki~iiGa-G~vG~~~a~~l~~~~~~~el~L~D~~~~~   43 (315)
T PRK00066          4 KQHNKVVLVGD-GAVGSSYAYALVNQGIADELVIIDINKEK   43 (315)
T ss_pred             CCCCEEEEECC-CHHHHHHHHHHHhcCCCCEEEEEeCCCch
Confidence            34579999997 9999999999998884 479999997654

>PRK06223 malate dehydrogenase; Reviewed

Probab=87.75  E-value=1  Score=42.48  Aligned_cols=37  Identities=27%  Similarity=0.376  Sum_probs=31.4

Q ss_pred             CCeEEEEcCCChhHHHHHHHHHHcCCceEEEEecCCCC
Q 017760           11 GKTFLVTGGLGHVGSALCLELVRRGAYQVRAFDLRTNS   48 (366)
Q Consensus        11 ~~~VlITGgtGfiG~~L~~~L~~~g~~~V~~~dr~~~~   48 (366)
                      |+||.|.|+ |.+|+.++..+...|..+|+++|+++..
T Consensus         2 ~~KI~VIGa-G~vG~~ia~~la~~~~~ev~L~D~~~~~   38 (307)
T PRK06223          2 RKKISIIGA-GNVGATLAHLLALKELGDVVLFDIVEGV   38 (307)
T ss_pred             CCEEEEECC-CHHHHHHHHHHHhCCCeEEEEEECCCch
Confidence            479999998 9999999999998872289999996543

>PRK05808 3-hydroxybutyryl-CoA dehydrogenase; Validated

Probab=87.74  E-value=0.74  Score=42.80  Aligned_cols=36  Identities=22%  Similarity=0.334  Sum_probs=30.7

Q ss_pred             cCCeEEEEcCCChhHHHHHHHHHHcCCceEEEEecCCC
Q 017760           10 EGKTFLVTGGLGHVGSALCLELVRRGAYQVRAFDLRTN   47 (366)
Q Consensus        10 ~~~~VlITGgtGfiG~~L~~~L~~~g~~~V~~~dr~~~   47 (366)
                      ++++|.|. |+|.+|..++..+.+.| ++|+++|+++.
T Consensus         2 ~~~kI~VI-G~G~mG~~ia~~la~~g-~~V~~~d~~~~   37 (282)
T PRK05808          2 GIQKIGVI-GAGTMGNGIAQVCAVAG-YDVVMVDISDA   37 (282)
T ss_pred             CccEEEEE-ccCHHHHHHHHHHHHCC-CceEEEeCCHH
Confidence            34689888 55999999999999999 48999998764

>cd01492 Aos1_SUMO Ubiquitin activating enzyme (E1) subunit Aos1

Probab=87.71  E-value=0.55  Score=41.33  Aligned_cols=39  Identities=26%  Similarity=0.389  Sum_probs=33.3

Q ss_pred             ccccCCeEEEEcCCChhHHHHHHHHHHcCCceEEEEecCC
Q 017760            7 EGIEGKTFLVTGGLGHVGSALCLELVRRGAYQVRAFDLRT   46 (366)
Q Consensus         7 ~~~~~~~VlITGgtGfiG~~L~~~L~~~g~~~V~~~dr~~   46 (366)
                      +..+..+|+|.|.+| +|+.+++.|...|..+++.+|-..
T Consensus        17 ~~L~~s~VlIiG~gg-lG~evak~La~~GVg~i~lvD~d~   55 (197)
T cd01492          17 KRLRSARILLIGLKG-LGAEIAKNLVLSGIGSLTILDDRT   55 (197)
T ss_pred             HHHHhCcEEEEcCCH-HHHHHHHHHHHcCCCEEEEEECCc
Confidence            345568999998777 999999999999988899998764

Aos1 is part of the heterodimeric activating enzyme (E1), specific for the SUMO family of ubiquitin-like proteins (Ubls). E1 enzymes are part of a conjugation cascade to attach Ub or Ubls, covalently to substrate proteins consisting of activating (E1), conjugating (E2), and/or ligating (E3) enzymes. E1 activates ubiquitin by C-terminal adenylation, and subsequently forms a highly reactive thioester bond between its catalytic cysteine and Ubls C-terminus. The E1 also associates with E2 and promotes ubiquitin transfer to the E2's catalytic cysteine. Post-translational modification by SUMO family of ubiquitin-like proteins (Ublps) is involved in cell division, nuclear transport, the stress response and signal transduction. Aos1 contains part of the adenylation domain.

>PRK00094 gpsA NAD(P)H-dependent glycerol-3-phosphate dehydrogenase; Validated

Probab=87.60  E-value=0.78  Score=43.35  Aligned_cols=34  Identities=29%  Similarity=0.388  Sum_probs=29.9

Q ss_pred             CCeEEEEcCCChhHHHHHHHHHHcCCceEEEEecCC
Q 017760           11 GKTFLVTGGLGHVGSALCLELVRRGAYQVRAFDLRT   46 (366)
Q Consensus        11 ~~~VlITGgtGfiG~~L~~~L~~~g~~~V~~~dr~~   46 (366)
                      ||+|.|.| +|.+|..++..|.+.| ++|.++++++
T Consensus         1 mmkI~iiG-~G~mG~~~a~~L~~~g-~~V~~~~r~~   34 (325)
T PRK00094          1 MMKIAVLG-AGSWGTALAIVLARNG-HDVTLWARDP   34 (325)
T ss_pred             CCEEEEEC-CCHHHHHHHHHHHhCC-CEEEEEECCH
Confidence            46899995 6999999999999999 5899999875

>COG1004 Ugd Predicted UDP-glucose 6-dehydrogenase [Cell envelope biogenesis, outer membrane]

Probab=87.38  E-value=0.77  Score=44.44  Aligned_cols=35  Identities=26%  Similarity=0.286  Sum_probs=30.8

Q ss_pred             CeEEEEcCCChhHHHHHHHHHHcCCceEEEEecCCCC
Q 017760           12 KTFLVTGGLGHVGSALCLELVRRGAYQVRAFDLRTNS   48 (366)
Q Consensus        12 ~~VlITGgtGfiG~~L~~~L~~~g~~~V~~~dr~~~~   48 (366)
                      |+|.|. |+||+|-..+--|.+.| |+|+++|+.+.+
T Consensus         1 MkI~vi-GtGYVGLv~g~~lA~~G-HeVv~vDid~~K   35 (414)
T COG1004           1 MKITVI-GTGYVGLVTGACLAELG-HEVVCVDIDESK   35 (414)
T ss_pred             CceEEE-CCchHHHHHHHHHHHcC-CeEEEEeCCHHH
Confidence            577777 89999999999999999 899999998643

>PRK06728 aspartate-semialdehyde dehydrogenase; Provisional

Probab=87.19  E-value=2.2  Score=41.04  Aligned_cols=35  Identities=23%  Similarity=0.295  Sum_probs=27.0

Q ss_pred             CCeEEEEcCCChhHHHHHHHHHH-cCCce---EEEEecCC
Q 017760           11 GKTFLVTGGLGHVGSALCLELVR-RGAYQ---VRAFDLRT   46 (366)
Q Consensus        11 ~~~VlITGgtGfiG~~L~~~L~~-~g~~~---V~~~dr~~   46 (366)
                      .++|.|.||||++|+.+++.|.+ ... +   +..+....
T Consensus         5 ~~~VaIvGATG~vG~ell~lL~~h~~f-~v~~l~~~aS~~   43 (347)
T PRK06728          5 GYHVAVVGATGAVGQKIIELLEKETKF-NIAEVTLLSSKR   43 (347)
T ss_pred             CCEEEEEeCCCHHHHHHHHHHHHCCCC-CcccEEEEECcc
Confidence            36899999999999999999996 443 4   55565443

>PRK00258 aroE shikimate 5-dehydrogenase; Reviewed

Probab=87.03  E-value=1.1  Score=41.55  Aligned_cols=38  Identities=24%  Similarity=0.458  Sum_probs=32.7

Q ss_pred             ccCCeEEEEcCCChhHHHHHHHHHHcCCceEEEEecCCC
Q 017760            9 IEGKTFLVTGGLGHVGSALCLELVRRGAYQVRAFDLRTN   47 (366)
Q Consensus         9 ~~~~~VlITGgtGfiG~~L~~~L~~~g~~~V~~~dr~~~   47 (366)
                      ..+++++|+|+ |-+|++++..|.+.|..+|++++|+..
T Consensus       121 ~~~k~vlVlGa-Gg~a~ai~~aL~~~g~~~V~v~~R~~~  158 (278)
T PRK00258        121 LKGKRILILGA-GGAARAVILPLLDLGVAEITIVNRTVE  158 (278)
T ss_pred             CCCCEEEEEcC-cHHHHHHHHHHHHcCCCEEEEEeCCHH
Confidence            45678999986 999999999999999558999998753

>cd05191 NAD_bind_amino_acid_DH NAD(P) binding domain of amino acid dehydrogenase-like proteins

Probab=86.98  E-value=1.8  Score=32.43  Aligned_cols=35  Identities=34%  Similarity=0.534  Sum_probs=30.1

Q ss_pred             ccCCeEEEEcCCChhHHHHHHHHHHcCCceEEEEec
Q 017760            9 IEGKTFLVTGGLGHVGSALCLELVRRGAYQVRAFDL   44 (366)
Q Consensus         9 ~~~~~VlITGgtGfiG~~L~~~L~~~g~~~V~~~dr   44 (366)
                      ...++++|.|. |.+|+.++..|.+.+..+|...|+
T Consensus        21 ~~~~~v~i~G~-G~~g~~~a~~l~~~~~~~v~v~~r   55 (86)
T cd05191          21 LKGKTVVVLGA-GEVGKGIAKLLADEGGKKVVLCDR   55 (86)
T ss_pred             CCCCEEEEECC-CHHHHHHHHHHHHcCCCEEEEEcC
Confidence            55689999988 999999999999985458888877

Amino acid dehydrogenase(DH)-like NAD(P)-binding domains are members of the Rossmann fold superfamily and are found in glutamate, leucine, and phenylalanine DHs (DHs), methylene tetrahydrofolate DH, methylene-tetrahydromethanopterin DH, methylene-tetrahydropholate DH/cyclohydrolase, Shikimate DH-like proteins, malate oxidoreductases, and glutamyl tRNA reductase. Amino acid DHs catalyze the deamination of amino acids to keto acids with NAD(P)+ as a cofactor. The NAD(P)-binding Rossmann fold superfamily includes a wide variety of protein families including NAD(P)- binding domains of alcohol DHs, tyrosine-dependent oxidoreductases, glyceraldehyde-3-phosphate DH, lactate/malate DHs, formate/glycerate DHs, siroheme synthases, 6-phosphogluconate DH, amino acid DHs, repressor rex, NAD-binding potassium channel domain, CoA-binding, and ornithine cyclodeaminase-like domains. These domains have an al

>PRK11863 N-acetyl-gamma-glutamyl-phosphate reductase; Provisional

Probab=86.66  E-value=1.3  Score=41.99  Aligned_cols=33  Identities=15%  Similarity=0.273  Sum_probs=26.5

Q ss_pred             CCeEEEEcCCChhHHHHHHHHHHcCCceEEEEe
Q 017760           11 GKTFLVTGGLGHVGSALCLELVRRGAYQVRAFD   43 (366)
Q Consensus        11 ~~~VlITGgtGfiG~~L~~~L~~~g~~~V~~~d   43 (366)
                      +.+|.|.||||++|..|++.|.+...-++..+.
T Consensus         2 ~~~VaIvGAtGy~G~eLlrlL~~hp~~~l~~~~   34 (313)
T PRK11863          2 KPKVFIDGEAGTTGLQIRERLAGRSDIELLSIP   34 (313)
T ss_pred             CcEEEEECCCCHHHHHHHHHHhcCCCeEEEEEe
Confidence            578999999999999999999998732444443

>PF00070 Pyr_redox: Pyridine nucleotide-disulphide oxidoreductase; InterPro: IPR001327 FAD flavoproteins belonging to the family of pyridine nucleotide-disulphide oxidoreductases (glutathione reductase, trypanothione reductase, lipoamide dehydrogenase, mercuric reductase, thioredoxin reductase, alkyl hydroperoxide reductase) share sequence similarity with a number of other flavoprotein oxidoreductases, in particular with ferredoxin-NAD+ reductases involved in oxidative metabolism of a variety of hydrocarbons (rubredoxin reductase, putidaredoxin reductase, terpredoxin reductase, ferredoxin-NAD+ reductase components of benzene 1,2-dioxygenase, toluene 1,2-dioxygenase, chlorobenzene dioxygenase, biphenyl dioxygenase), NADH oxidase and NADH peroxidase [, , ]

Probab=86.66  E-value=1.9  Score=31.67  Aligned_cols=35  Identities=23%  Similarity=0.292  Sum_probs=29.5

Q ss_pred             eEEEEcCCChhHHHHHHHHHHcCCceEEEEecCCCCc
Q 017760           13 TFLVTGGLGHVGSALCLELVRRGAYQVRAFDLRTNSP   49 (366)
Q Consensus        13 ~VlITGgtGfiG~~L~~~L~~~g~~~V~~~dr~~~~~   49 (366)
                      +|+|. |+|++|-.++..|.+.| .+|+.+.+++...
T Consensus         1 ~vvVi-GgG~ig~E~A~~l~~~g-~~vtli~~~~~~~   35 (80)
T PF00070_consen    1 RVVVI-GGGFIGIELAEALAELG-KEVTLIERSDRLL   35 (80)
T ss_dssp             EEEEE-SSSHHHHHHHHHHHHTT-SEEEEEESSSSSS
T ss_pred             CEEEE-CcCHHHHHHHHHHHHhC-cEEEEEeccchhh
Confidence            45665 78999999999999999 4999999887544

Comparison of the crystal structures of human glutathione reductase and Escherichia coli thioredoxin reductase reveals different locations of their active sites, suggesting that the enzymes diverged from an ancestral FAD/NAD(P)H reductase and acquired their disulphide reductase activities independently []. Despite functional similarities, oxidoreductases of this family show no sequence similarity with adrenodoxin reductases [] and flavoprotein pyridine nucleotide cytochrome reductases (FPNCR) []. Assuming that disulphide reductase activity emerged later, during divergent evolution, the family can be referred to as FAD-dependent pyridine nucleotide reductases, FADPNR. To date, 3D structures of glutathione reductase [], thioredoxin reductase [], mercuric reductase [], lipoamide dehydrogenase [], trypanothione reductase [] and NADH peroxidase [] have been solved. The enzymes share similar tertiary structures based on a doubly-wound alpha/beta fold, but the relative orientations of their FAD- and NAD(P)H-binding domains may vary significantly. By contrast with the FPNCR family, the folds of the FAD- and NAD(P)H-binding domains are similar, suggesting that the domains evolved by gene duplication []. This entry describes a small NADH binding domain within a larger FAD binding domain described by IPR023753 from INTERPRO. It is found in both class I and class II oxidoreductases. ; GO: 0016491 oxidoreductase activity, 0050660 flavin adenine dinucleotide binding, 0055114 oxidation-reduction process; PDB: 1ZKQ_A 3DGZ_A 1ZDL_A 2R9Z_B 2RAB_A 2A87_B 1M6I_A 2YVG_A 2GR1_A 2GQW_A ....

>PRK07417 arogenate dehydrogenase; Reviewed

Probab=86.59  E-value=0.87  Score=42.33  Aligned_cols=34  Identities=29%  Similarity=0.429  Sum_probs=29.6

Q ss_pred             CeEEEEcCCChhHHHHHHHHHHcCCceEEEEecCCC
Q 017760           12 KTFLVTGGLGHVGSALCLELVRRGAYQVRAFDLRTN   47 (366)
Q Consensus        12 ~~VlITGgtGfiG~~L~~~L~~~g~~~V~~~dr~~~   47 (366)
                      |+|.|.| .|.+|..++..|.+.| ++|.+.|+++.
T Consensus         1 m~I~IIG-~G~mG~sla~~L~~~g-~~V~~~d~~~~   34 (279)
T PRK07417          1 MKIGIVG-LGLIGGSLGLDLRSLG-HTVYGVSRRES   34 (279)
T ss_pred             CeEEEEe-ecHHHHHHHHHHHHCC-CEEEEEECCHH
Confidence            3788885 8999999999999999 59999998753

>PTZ00082 L-lactate dehydrogenase; Provisional

Probab=86.49  E-value=1.5  Score=41.80  Aligned_cols=40  Identities=23%  Similarity=0.370  Sum_probs=33.6

Q ss_pred             cccCCeEEEEcCCChhHHHHHHHHHHcCCceEEEEecCCCC
Q 017760            8 GIEGKTFLVTGGLGHVGSALCLELVRRGAYQVRAFDLRTNS   48 (366)
Q Consensus         8 ~~~~~~VlITGgtGfiG~~L~~~L~~~g~~~V~~~dr~~~~   48 (366)
                      +.+.+||.|.| +|.+|+.++..+...|..+|+.+|+++..
T Consensus         3 ~~~~~KI~IIG-aG~vG~~ia~~la~~gl~~i~LvDi~~~~   42 (321)
T PTZ00082          3 MIKRRKISLIG-SGNIGGVMAYLIVLKNLGDVVLFDIVKNI   42 (321)
T ss_pred             CCCCCEEEEEC-CCHHHHHHHHHHHhCCCCeEEEEeCCCch
Confidence            44567999998 69999999999998885479999998764

>PRK14192 bifunctional 5,10-methylene-tetrahydrofolate dehydrogenase/ 5,10-methylene-tetrahydrofolate cyclohydrolase; Provisional

Probab=86.48  E-value=1.3  Score=41.39  Aligned_cols=37  Identities=24%  Similarity=0.380  Sum_probs=33.1

Q ss_pred             cccCCeEEEEcCCChhHHHHHHHHHHcCCceEEEEecC
Q 017760            8 GIEGKTFLVTGGLGHVGSALCLELVRRGAYQVRAFDLR   45 (366)
Q Consensus         8 ~~~~~~VlITGgtGfiG~~L~~~L~~~g~~~V~~~dr~   45 (366)
                      ..++++|+|.|.+|.+|+.++..|.++|. +|+...++
T Consensus       156 ~l~Gk~vvViG~gg~vGkpia~~L~~~ga-tVtv~~~~  192 (283)
T PRK14192        156 ELAGKHAVVVGRSAILGKPMAMMLLNANA-TVTICHSR  192 (283)
T ss_pred             CCCCCEEEEECCcHHHHHHHHHHHHhCCC-EEEEEeCC
Confidence            35678999999999999999999999997 89999774

>PRK08229 2-dehydropantoate 2-reductase; Provisional

Probab=86.37  E-value=0.96  Score=43.18  Aligned_cols=34  Identities=24%  Similarity=0.229  Sum_probs=30.2

Q ss_pred             CCeEEEEcCCChhHHHHHHHHHHcCCceEEEEecCC
Q 017760           11 GKTFLVTGGLGHVGSALCLELVRRGAYQVRAFDLRT   46 (366)
Q Consensus        11 ~~~VlITGgtGfiG~~L~~~L~~~g~~~V~~~dr~~   46 (366)
                      ||+|.|. |+|.+|..++..|.+.| ++|++++|++
T Consensus         2 ~mkI~Ii-G~G~mG~~~A~~L~~~G-~~V~~~~r~~   35 (341)
T PRK08229          2 MARICVL-GAGSIGCYLGGRLAAAG-ADVTLIGRAR   35 (341)
T ss_pred             CceEEEE-CCCHHHHHHHHHHHhcC-CcEEEEecHH
Confidence            3679988 79999999999999999 6999999864

>PRK12409 D-amino acid dehydrogenase small subunit; Provisional

Probab=86.37  E-value=1.1  Score=43.79  Aligned_cols=33  Identities=36%  Similarity=0.588  Sum_probs=29.6

Q ss_pred             CeEEEEcCCChhHHHHHHHHHHcCCceEEEEecCC
Q 017760           12 KTFLVTGGLGHVGSALCLELVRRGAYQVRAFDLRT   46 (366)
Q Consensus        12 ~~VlITGgtGfiG~~L~~~L~~~g~~~V~~~dr~~   46 (366)
                      .+|+|. |+|++|...+.+|.++| ++|.++++..
T Consensus         2 ~~vvII-GaG~~G~~~A~~La~~g-~~V~vle~~~   34 (410)
T PRK12409          2 SHIAVI-GAGITGVTTAYALAQRG-YQVTVFDRHR   34 (410)
T ss_pred             CEEEEE-CCCHHHHHHHHHHHHCC-CeEEEEeCCC
Confidence            578888 67999999999999999 5999999975

>PF01113 DapB_N: Dihydrodipicolinate reductase, N-terminus; InterPro: IPR000846 Dihydrodipicolinate reductase catalyzes the second step in the biosynthesis of diaminopimelic acid and lysine, the NAD or NADP-dependent reduction of 2,3-dihydrodipicolinate into 2,3,4,5-tetrahydrodipicolinate [, , ]

Probab=86.19  E-value=1.6  Score=35.32  Aligned_cols=34  Identities=18%  Similarity=0.404  Sum_probs=27.2

Q ss_pred             CeEEEEcCCChhHHHHHHHHHH-cCCceEEEE-ecCC
Q 017760           12 KTFLVTGGLGHVGSALCLELVR-RGAYQVRAF-DLRT   46 (366)
Q Consensus        12 ~~VlITGgtGfiG~~L~~~L~~-~g~~~V~~~-dr~~   46 (366)
                      ++|.|.|.+|-+|+.+++.+.+ .+ .++.+. ++++
T Consensus         1 mrV~i~G~~GrMG~~i~~~i~~~~~-~~lv~~v~~~~   36 (124)
T PF01113_consen    1 MRVGIVGASGRMGRAIAEAILESPG-FELVGAVDRKP   36 (124)
T ss_dssp             EEEEEETTTSHHHHHHHHHHHHSTT-EEEEEEEETTT
T ss_pred             CEEEEECCCCHHHHHHHHHHHhcCC-cEEEEEEecCC
Confidence            4899999999999999999999 56 465555 4444

In Escherichia coli and Mycobacterium tuberculosis, dihydrodipicolinate reductase has equal specificity for NADH and NADPH, however in Thermotoga maritima there it has a greater affinity for NADPH []. In addition, the enzyme is inhibited by high concentrations of its substrate, which consequently acts as a feedback control on the lysine biosynthesis pathway. In T. maritima, the enzyme also lacks N-terminal and C-terminal loops which are present in enzyme of the former two organisms. This entry represents the N-terminal domain of dihydrodipicolinate reductase which binds the dinucleotide NAD(P)H.; GO: 0008839 dihydrodipicolinate reductase activity, 0009089 lysine biosynthetic process via diaminopimelate, 0055114 oxidation-reduction process; PDB: 3QY9_D 1VM6_C 1ARZ_A 1DIH_A 1DRW_A 1DRV_A 1DRU_A 2DAP_A 1DAP_B 3DAP_A ....

>KOG1210 consensus Predicted 3-ketosphinganine reductase [Secondary metabolites biosynthesis, transport and catabolism]

Probab=86.12  E-value=6.8  Score=36.85  Aligned_cols=107  Identities=21%  Similarity=0.128  Sum_probs=66.1

Q ss_pred             CeEEEEcCCChhHHHHHHHHHHcCCceEEEEecCCCCccc--ccc----cCCCeEEEEcc------------ccCCCCCc
Q 017760           12 KTFLVTGGLGHVGSALCLELVRRGAYQVRAFDLRTNSPWS--HLL----INHGVHCIQGL------------RKNNRKCL   73 (366)
Q Consensus        12 ~~VlITGgtGfiG~~L~~~L~~~g~~~V~~~dr~~~~~~~--~~~----~~~~v~~i~gD------------ks~~~~~l   73 (366)
                      .+|+||||+--+|.+++.++...|. +|+++.|+..+-..  ..+    ..++|.+..+|            +.....+.
T Consensus        34 ~hi~itggS~glgl~la~e~~~~ga-~Vti~ar~~~kl~~a~~~l~l~~~~~~v~~~S~d~~~Y~~v~~~~~~l~~~~~~  112 (331)
T KOG1210|consen   34 RHILITGGSSGLGLALALECKREGA-DVTITARSGKKLLEAKAELELLTQVEDVSYKSVDVIDYDSVSKVIEELRDLEGP  112 (331)
T ss_pred             ceEEEecCcchhhHHHHHHHHHccC-ceEEEeccHHHHHHHHhhhhhhhccceeeEeccccccHHHHHHHHhhhhhccCC
Confidence            5899999999999999999999994 89999887643211  000    12346677777            11223355


Q ss_pred             eEEEEeCCccccCCCC-CCHHHHHHHHHcCCCCeeecCCCcceeceeHHHHHHHHHHHHh
Q 017760           74 YTCAVRPAAIYGPGEE-RHLPRIVSLAKLGLVPFKIGEPSVKTDWIYVDNLVLALILASM  132 (366)
Q Consensus        74 ~~~ilRp~~iyGp~~~-~~l~~~i~~~~~g~~~~~~g~~~~~~~~v~vdDla~a~~~a~~  132 (366)
                      ....++-+++.=|+.- ..-+..++...+             .++.--=+++.+.+.++.
T Consensus       113 ~d~l~~cAG~~v~g~f~~~s~~~v~~~m~-------------vNylgt~~v~~~~~~~mk  159 (331)
T KOG1210|consen  113 IDNLFCCAGVAVPGLFEDLSPEVVEKLMD-------------VNYLGTVNVAKAAARAMK  159 (331)
T ss_pred             cceEEEecCcccccccccCCHHHHHHHHH-------------hhhhhhHHHHHHHHHHhh
Confidence            5666666665555431 112222322211             344445578888888886

>PRK06522 2-dehydropantoate 2-reductase; Reviewed

Probab=86.02  E-value=1.1  Score=41.95  Aligned_cols=33  Identities=21%  Similarity=0.349  Sum_probs=29.0

Q ss_pred             CeEEEEcCCChhHHHHHHHHHHcCCceEEEEecCC
Q 017760           12 KTFLVTGGLGHVGSALCLELVRRGAYQVRAFDLRT   46 (366)
Q Consensus        12 ~~VlITGgtGfiG~~L~~~L~~~g~~~V~~~dr~~   46 (366)
                      |+|.|.|+ |-+|..++..|.+.| ++|+.++|++
T Consensus         1 m~I~IiG~-G~~G~~~a~~L~~~g-~~V~~~~r~~   33 (304)
T PRK06522          1 MKIAILGA-GAIGGLFGAALAQAG-HDVTLVARRG   33 (304)
T ss_pred             CEEEEECC-CHHHHHHHHHHHhCC-CeEEEEECCh
Confidence            47899965 999999999999999 6999999864

>PRK09260 3-hydroxybutyryl-CoA dehydrogenase; Validated

Probab=85.88  E-value=1  Score=42.03  Aligned_cols=34  Identities=21%  Similarity=0.532  Sum_probs=29.8

Q ss_pred             CeEEEEcCCChhHHHHHHHHHHcCCceEEEEecCCC
Q 017760           12 KTFLVTGGLGHVGSALCLELVRRGAYQVRAFDLRTN   47 (366)
Q Consensus        12 ~~VlITGgtGfiG~~L~~~L~~~g~~~V~~~dr~~~   47 (366)
                      ++|.|.|+ |.+|..++..|.+.| ++|++.|+++.
T Consensus         2 ~~V~VIG~-G~mG~~iA~~la~~G-~~V~~~d~~~~   35 (288)
T PRK09260          2 EKLVVVGA-GVMGRGIAYVFAVSG-FQTTLVDIKQE   35 (288)
T ss_pred             cEEEEECc-cHHHHHHHHHHHhCC-CcEEEEeCCHH
Confidence            57888855 999999999999999 59999998864

>PRK04308 murD UDP-N-acetylmuramoyl-L-alanyl-D-glutamate synthetase; Provisional

Probab=85.87  E-value=1.7  Score=43.20  Aligned_cols=55  Identities=24%  Similarity=0.296  Sum_probs=38.6

Q ss_pred             ccCCeEEEEcCCChhHHHHHHHHHHcCCceEEEEecCCCCcccccccC--CCeEEEEcc
Q 017760            9 IEGKTFLVTGGLGHVGSALCLELVRRGAYQVRAFDLRTNSPWSHLLIN--HGVHCIQGL   65 (366)
Q Consensus         9 ~~~~~VlITGgtGfiG~~L~~~L~~~g~~~V~~~dr~~~~~~~~~~~~--~~v~~i~gD   65 (366)
                      +.+++|+|+|++ -.|..+++.|.++|+ +|.+.|..+.......+..  .++.+..++
T Consensus         3 ~~~~~~~v~G~g-~~G~~~a~~l~~~g~-~v~~~d~~~~~~~~~~l~~~~~gi~~~~g~   59 (445)
T PRK04308          3 FQNKKILVAGLG-GTGISMIAYLRKNGA-EVAAYDAELKPERVAQIGKMFDGLVFYTGR   59 (445)
T ss_pred             CCCCEEEEECCC-HHHHHHHHHHHHCCC-EEEEEeCCCCchhHHHHhhccCCcEEEeCC
Confidence            345789999874 799999999999995 8999998765432222221  356665553

>PRK14194 bifunctional 5,10-methylene-tetrahydrofolate dehydrogenase/ 5,10-methylene-tetrahydrofolate cyclohydrolase; Provisional

Probab=85.82  E-value=1.7  Score=40.78  Aligned_cols=39  Identities=23%  Similarity=0.347  Sum_probs=34.4

Q ss_pred             cccCCeEEEEcCCChhHHHHHHHHHHcCCceEEEEecCCC
Q 017760            8 GIEGKTFLVTGGLGHVGSALCLELVRRGAYQVRAFDLRTN   47 (366)
Q Consensus         8 ~~~~~~VlITGgtGfiG~~L~~~L~~~g~~~V~~~dr~~~   47 (366)
                      ...+++|.|.|.+|.+|..++..|.++|+ +|+..+++..
T Consensus       156 ~l~Gk~V~vIG~s~ivG~PmA~~L~~~ga-tVtv~~~~t~  194 (301)
T PRK14194        156 DLTGKHAVVIGRSNIVGKPMAALLLQAHC-SVTVVHSRST  194 (301)
T ss_pred             CCCCCEEEEECCCCccHHHHHHHHHHCCC-EEEEECCCCC
Confidence            35689999999999999999999999995 8999977654

>PRK07530 3-hydroxybutyryl-CoA dehydrogenase; Validated

Probab=85.81  E-value=1.2  Score=41.51  Aligned_cols=37  Identities=24%  Similarity=0.354  Sum_probs=31.6

Q ss_pred             ccCCeEEEEcCCChhHHHHHHHHHHcCCceEEEEecCCC
Q 017760            9 IEGKTFLVTGGLGHVGSALCLELVRRGAYQVRAFDLRTN   47 (366)
Q Consensus         9 ~~~~~VlITGgtGfiG~~L~~~L~~~g~~~V~~~dr~~~   47 (366)
                      |+.++|.|. |+|.+|..++..|.+.| ++|++.|+++.
T Consensus         2 ~~~~kI~vI-GaG~mG~~iA~~la~~G-~~V~l~d~~~~   38 (292)
T PRK07530          2 MAIKKVGVI-GAGQMGNGIAHVCALAG-YDVLLNDVSAD   38 (292)
T ss_pred             CCCCEEEEE-CCcHHHHHHHHHHHHCC-CeEEEEeCCHH
Confidence            445789998 56999999999999999 59999998754

>PF10727 Rossmann-like: Rossmann-like domain; InterPro: IPR019665 This entry represents an NAD/NADP-binding domain with a core Rossmann-type fold, found in an uncharacterised protein family thought to be putative NADP oxidoreductase coenzyme F420-dependent proteins and/or NAD-dependent glycerol-3-phosphate dehydrogenase-like proteins

Probab=85.78  E-value=0.83  Score=37.21  Aligned_cols=42  Identities=29%  Similarity=0.366  Sum_probs=26.8

Q ss_pred             CCccccccccCCeEEEEcCCChhHHHHHHHHHHcCCceEEEEecC
Q 017760            1 MHLSENEGIEGKTFLVTGGLGHVGSALCLELVRRGAYQVRAFDLR   45 (366)
Q Consensus         1 m~~~~~~~~~~~~VlITGgtGfiG~~L~~~L~~~g~~~V~~~dr~   45 (366)
                      |+.+.. ....++|-|.|+ |-+|++|++.|.+.| ++|..+..+
T Consensus         1 ~~~~~~-~~~~l~I~iIGa-GrVG~~La~aL~~ag-~~v~~v~sr   42 (127)
T PF10727_consen    1 MNTPAT-QAARLKIGIIGA-GRVGTALARALARAG-HEVVGVYSR   42 (127)
T ss_dssp             ------------EEEEECT-SCCCCHHHHHHHHTT-SEEEEESSC
T ss_pred             CCcccc-CCCccEEEEECC-CHHHHHHHHHHHHCC-CeEEEEEeC
Confidence            444433 234578999965 999999999999999 589887543

This Rossmann-fold domain consists of 3-layers alpha/beta/alpha, where the six beta strands are parallel in the order 321456.; PDB: 3DFU_A 3C24_A.

>PRK13656 trans-2-enoyl-CoA reductase; Provisional

Probab=85.73  E-value=1.3  Score=43.14  Aligned_cols=33  Identities=24%  Similarity=0.275  Sum_probs=29.1

Q ss_pred             CCeEEEEcCCChhHHH--HHHHHHHcCCceEEEEecC
Q 017760           11 GKTFLVTGGLGHVGSA--LCLELVRRGAYQVRAFDLR   45 (366)
Q Consensus        11 ~~~VlITGgtGfiG~~--L~~~L~~~g~~~V~~~dr~   45 (366)
                      ++++||||+++-+|.+  +++.| +.|+ +|.++++.
T Consensus        41 gK~aLVTGaSsGIGlA~~IA~al-~~GA-~Vi~v~~~   75 (398)
T PRK13656         41 PKKVLVIGASSGYGLASRIAAAF-GAGA-DTLGVFFE   75 (398)
T ss_pred             CCEEEEECCCchHhHHHHHHHHH-HcCC-eEEEEecC
Confidence            5799999999999999  89999 9996 78888754

>PRK06249 2-dehydropantoate 2-reductase; Provisional

Probab=85.70  E-value=1.5  Score=41.44  Aligned_cols=36  Identities=22%  Similarity=0.287  Sum_probs=31.5

Q ss_pred             ccCCeEEEEcCCChhHHHHHHHHHHcCCceEEEEecCC
Q 017760            9 IEGKTFLVTGGLGHVGSALCLELVRRGAYQVRAFDLRT   46 (366)
Q Consensus         9 ~~~~~VlITGgtGfiG~~L~~~L~~~g~~~V~~~dr~~   46 (366)
                      ++.|+|+|. |+|-+|..++..|.+.| ++|+.++|++
T Consensus         3 ~~~m~I~Ii-G~GaiG~~lA~~L~~~g-~~V~~~~r~~   38 (313)
T PRK06249          3 SETPRIGII-GTGAIGGFYGAMLARAG-FDVHFLLRSD   38 (313)
T ss_pred             CcCcEEEEE-CCCHHHHHHHHHHHHCC-CeEEEEEeCC
Confidence            345789999 78999999999999999 6999999875

>PLN02545 3-hydroxybutyryl-CoA dehydrogenase

Probab=85.68  E-value=1.3  Score=41.54  Aligned_cols=37  Identities=27%  Similarity=0.302  Sum_probs=31.6

Q ss_pred             ccCCeEEEEcCCChhHHHHHHHHHHcCCceEEEEecCCC
Q 017760            9 IEGKTFLVTGGLGHVGSALCLELVRRGAYQVRAFDLRTN   47 (366)
Q Consensus         9 ~~~~~VlITGgtGfiG~~L~~~L~~~g~~~V~~~dr~~~   47 (366)
                      +..++|.|. |.|.+|..++..|++.| ++|+++|+++.
T Consensus         2 ~~~~~V~vI-G~G~mG~~iA~~l~~~G-~~V~~~d~~~~   38 (295)
T PLN02545          2 AEIKKVGVV-GAGQMGSGIAQLAAAAG-MDVWLLDSDPA   38 (295)
T ss_pred             CCcCEEEEE-CCCHHHHHHHHHHHhcC-CeEEEEeCCHH
Confidence            345789988 56999999999999999 59999998764

>PRK12475 thiamine/molybdopterin biosynthesis MoeB-like protein; Provisional

Probab=85.61  E-value=0.98  Score=43.32  Aligned_cols=38  Identities=32%  Similarity=0.402  Sum_probs=32.0

Q ss_pred             cccCCeEEEEcCCChhHHHHHHHHHHcCCceEEEEecCC
Q 017760            8 GIEGKTFLVTGGLGHVGSALCLELVRRGAYQVRAFDLRT   46 (366)
Q Consensus         8 ~~~~~~VlITGgtGfiG~~L~~~L~~~g~~~V~~~dr~~   46 (366)
                      ..+..+|+|.|+ |-+|+++++.|.+.|..+++++|.+.
T Consensus        21 ~L~~~~VlIiG~-GglGs~va~~La~aGvg~i~lvD~D~   58 (338)
T PRK12475         21 KIREKHVLIVGA-GALGAANAEALVRAGIGKLTIADRDY   58 (338)
T ss_pred             hhcCCcEEEECC-CHHHHHHHHHHHHcCCCEEEEEcCCc
Confidence            455678999976 55999999999999976899998875

>PF02826 2-Hacid_dh_C: D-isomer specific 2-hydroxyacid dehydrogenase, NAD binding domain; InterPro: IPR006140 A number of NAD-dependent 2-hydroxyacid dehydrogenases which seem to be specific for the D-isomer of their substrate have been shown to be functionally and structurally related

Probab=85.52  E-value=2.2  Score=36.76  Aligned_cols=38  Identities=29%  Similarity=0.492  Sum_probs=33.1

Q ss_pred             ccCCeEEEEcCCChhHHHHHHHHHHcCCceEEEEecCCCC
Q 017760            9 IEGKTFLVTGGLGHVGSALCLELVRRGAYQVRAFDLRTNS   48 (366)
Q Consensus         9 ~~~~~VlITGgtGfiG~~L~~~L~~~g~~~V~~~dr~~~~   48 (366)
                      ..+++|.|. |.|-||+++++.|..-|. +|+++|+....
T Consensus        34 l~g~tvgIi-G~G~IG~~vA~~l~~fG~-~V~~~d~~~~~   71 (178)
T PF02826_consen   34 LRGKTVGII-GYGRIGRAVARRLKAFGM-RVIGYDRSPKP   71 (178)
T ss_dssp             STTSEEEEE-STSHHHHHHHHHHHHTT--EEEEEESSCHH
T ss_pred             cCCCEEEEE-EEcCCcCeEeeeeecCCc-eeEEecccCCh
Confidence            457899999 679999999999999996 99999998754

All contain a glycine-rich region located in the central section of these enzymes, this region corresponds to the NAD-binding domain. The catalytic domain is described in IPR006139 from INTERPRO ; GO: 0016616 oxidoreductase activity, acting on the CH-OH group of donors, NAD or NADP as acceptor, 0048037 cofactor binding, 0055114 oxidation-reduction process; PDB: 3JTM_A 3NAQ_B 3N7U_J 3KB6_B 3GG9_A 1QP8_B 2CUK_C 2W2L_D 2W2K_A 1WWK_A ....

>PRK14175 bifunctional 5,10-methylene-tetrahydrofolate dehydrogenase/ 5,10-methylene-tetrahydrofolate cyclohydrolase; Provisional

Probab=85.47  E-value=1.7  Score=40.48  Aligned_cols=37  Identities=30%  Similarity=0.436  Sum_probs=33.3

Q ss_pred             ccCCeEEEEcCCChhHHHHHHHHHHcCCceEEEEecCC
Q 017760            9 IEGKTFLVTGGLGHVGSALCLELVRRGAYQVRAFDLRT   46 (366)
Q Consensus         9 ~~~~~VlITGgtGfiG~~L~~~L~~~g~~~V~~~dr~~   46 (366)
                      ..+++|+|+|.++.+|+-++..|.++|. +|+.+.++.
T Consensus       156 l~Gk~vvVIGrs~~VG~pla~lL~~~ga-tVtv~~s~t  192 (286)
T PRK14175        156 LEGKNAVVIGRSHIVGQPVSKLLLQKNA-SVTILHSRS  192 (286)
T ss_pred             CCCCEEEEECCCchhHHHHHHHHHHCCC-eEEEEeCCc
Confidence            5689999999999999999999999996 899998754

>TIGR02354 thiF_fam2 thiamine biosynthesis protein ThiF, family 2

Probab=85.19  E-value=1  Score=39.74  Aligned_cols=38  Identities=26%  Similarity=0.420  Sum_probs=31.7

Q ss_pred             cccCCeEEEEcCCChhHHHHHHHHHHcCCceEEEEecCC
Q 017760            8 GIEGKTFLVTGGLGHVGSALCLELVRRGAYQVRAFDLRT   46 (366)
Q Consensus         8 ~~~~~~VlITGgtGfiG~~L~~~L~~~g~~~V~~~dr~~   46 (366)
                      ..+..+|+|.|+ |-+|+.++..|.+.|..+++.+|.+.
T Consensus        18 ~L~~~~V~IvG~-GglGs~ia~~La~~Gvg~i~lvD~D~   55 (200)
T TIGR02354        18 KLEQATVAICGL-GGLGSNVAINLARAGIGKLILVDFDV   55 (200)
T ss_pred             HHhCCcEEEECc-CHHHHHHHHHHHHcCCCEEEEECCCE
Confidence            345678999966 66999999999999976799998773

Members of the HesA/MoeB/ThiF family of proteins (pfam00899) include a number of members encoded in the midst of thiamine biosynthetic operons. This mix of known and putative ThiF proteins shows a deep split in phylogenetic trees, with one the E. coli ThiF and the E. coli MoeB proteins seemingly more closely related than E. coli ThiF and Campylobacter (for example) ThiF. This model represents the divergent clade of putative ThiF proteins such found in Campylobacter.

>TIGR01759 MalateDH-SF1 malate dehydrogenase

Probab=85.01  E-value=1.7  Score=41.36  Aligned_cols=36  Identities=19%  Similarity=0.306  Sum_probs=31.1

Q ss_pred             CCeEEEEcCCChhHHHHHHHHHHcCC-c-----eEEEEecCC
Q 017760           11 GKTFLVTGGLGHVGSALCLELVRRGA-Y-----QVRAFDLRT   46 (366)
Q Consensus        11 ~~~VlITGgtGfiG~~L~~~L~~~g~-~-----~V~~~dr~~   46 (366)
                      ..||.|+|++|++|++++..|...+. .     +++.+|+++
T Consensus         3 p~KV~IIGa~G~VG~~~a~~l~~~~~~~~~~~~el~L~Di~~   44 (323)
T TIGR01759         3 PVRVAVTGAAGQIGYSLLFRIASGELFGKDQPVVLHLLDIPP   44 (323)
T ss_pred             CeEEEEECCCcHHHHHHHHHHHhCCcccCCCccEEEEEecCC
Confidence            35899999999999999999998873 4     799999965

This model represents a family of malate dehydrogenases in bacteria and eukaryotes which utilize either NAD or NADP depending on the species and context. MDH interconverts malate and oxaloacetate and is a part of the citric acid cycle as well as the C4 cycle in certain photosynthetic organisms.

>KOG4022 consensus Dihydropteridine reductase DHPR/QDPR [Amino acid transport and metabolism]

Probab=84.62  E-value=5.6  Score=33.81  Aligned_cols=71  Identities=18%  Similarity=0.142  Sum_probs=49.1

Q ss_pred             cCCeEEEEcCCChhHHHHHHHHHHcCCceEEEEecCCCCcccccccCCCeEEEEcc---------------ccCCCCCce
Q 017760           10 EGKTFLVTGGLGHVGSALCLELVRRGAYQVRAFDLRTNSPWSHLLINHGVHCIQGL---------------RKNNRKCLY   74 (366)
Q Consensus        10 ~~~~VlITGgtGfiG~~L~~~L~~~g~~~V~~~dr~~~~~~~~~~~~~~v~~i~gD---------------ks~~~~~l~   74 (366)
                      +..+|+|-||-|-+|++.++.+..+++ -|-.+|........      .-..+.+|               ++.+...++
T Consensus         2 sagrVivYGGkGALGSacv~~Fkanny-wV~siDl~eNe~Ad------~sI~V~~~~swtEQe~~v~~~vg~sL~gekvD   74 (236)
T KOG4022|consen    2 SAGRVIVYGGKGALGSACVEFFKANNY-WVLSIDLSENEQAD------SSILVDGNKSWTEQEQSVLEQVGSSLQGEKVD   74 (236)
T ss_pred             CCceEEEEcCcchHhHHHHHHHHhcCe-EEEEEeeccccccc------ceEEecCCcchhHHHHHHHHHHHHhhcccccc
Confidence            446899999999999999999999995 89999998764321      22344455               335555666


Q ss_pred             EEEEeCCccccCC
Q 017760           75 TCAVRPAAIYGPG   87 (366)
Q Consensus        75 ~~ilRp~~iyGp~   87 (366)
                      .++--.++--|-.
T Consensus        75 av~CVAGGWAGGn   87 (236)
T KOG4022|consen   75 AVFCVAGGWAGGN   87 (236)
T ss_pred             eEEEeeccccCCC
Confidence            6555455544443

>PRK07688 thiamine/molybdopterin biosynthesis ThiF/MoeB-like protein; Validated

Probab=84.52  E-value=1.2  Score=42.85  Aligned_cols=38  Identities=32%  Similarity=0.415  Sum_probs=32.3

Q ss_pred             cccCCeEEEEcCCChhHHHHHHHHHHcCCceEEEEecCC
Q 017760            8 GIEGKTFLVTGGLGHVGSALCLELVRRGAYQVRAFDLRT   46 (366)
Q Consensus         8 ~~~~~~VlITGgtGfiG~~L~~~L~~~g~~~V~~~dr~~   46 (366)
                      .....+|+|.|+ |.+|+.++..|.+.|..+++++|...
T Consensus        21 ~L~~~~VlVvG~-GglGs~va~~La~aGvg~i~lvD~D~   58 (339)
T PRK07688         21 KLREKHVLIIGA-GALGTANAEMLVRAGVGKVTIVDRDY   58 (339)
T ss_pred             HhcCCcEEEECC-CHHHHHHHHHHHHcCCCeEEEEeCCc
Confidence            345678999965 89999999999999977899999864

>PRK13553 fumarate reductase cytochrome b-556 subunit; Provisional

Probab=84.51  E-value=4.6  Score=36.90  Aligned_cols=74  Identities=23%  Similarity=0.445  Sum_probs=54.5

Q ss_pred             HHHHhccccCCCCCchHHHHHHHHHHHHHHHHhhc-------CC-CCch-HHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
Q 017760          255 SYWQDRKRKSLDGPTIYAWLFCLIGLPALFATAYL-------PD-IGPV-PILRTIGLFIFKSMWMMRLAFAIAVSAHVS  325 (366)
Q Consensus       255 ~~~~~~~~~~~~~~~~~~w~~~~i~l~~~~~~~~l-------p~-~g~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~h~~  325 (366)
                      ..++++.+.-....|.+||...+.++..++..++.       |+ +||- +.-    ...+..+|.+.++.+++...|++
T Consensus       107 ~~~r~h~~~m~H~DT~lW~~Q~iTG~ilf~~~~~Hl~~i~~~~~~Ig~~~Sa~----rv~~~~~w~fYlvlL~~v~lH~~  182 (258)
T PRK13553        107 QIFRTHKHLMKHGDTSLWFIQAFTGFAMFFLASVHLYVMLTNPDKIGPYGSSD----RVVSQNMWLLYIVLLFAVELHGS  182 (258)
T ss_pred             HHHHHHHhhccCCccchHHHHHHHHHHHHHHHHHHHHhhhcCccccCchhhHH----HHhCCcHHHHHHHHHHHHHHHHH
Confidence            44555555445667789999999888777666654       55 9996 444    23344589999999999999999


Q ss_pred             HHHHHHH
Q 017760          326 EGVFAWC  332 (366)
Q Consensus       326 e~~~~~~  332 (366)
                      =++|.+.
T Consensus       183 iGLyR~~  189 (258)
T PRK13553        183 IGLYRLA  189 (258)
T ss_pred             Hhhhhee
Confidence            9999743

>PRK02006 murD UDP-N-acetylmuramoyl-L-alanyl-D-glutamate synthetase; Provisional

Probab=84.41  E-value=18  Score=36.50  Aligned_cols=140  Identities=21%  Similarity=0.164  Sum_probs=73.8

Q ss_pred             cCCeEEEEcCCChhHHHHHHHHHHcCCceEEEEecCCCCcccccccC--CCeEEEEcccc-CCCCCceEEEEeCCccccC
Q 017760           10 EGKTFLVTGGLGHVGSALCLELVRRGAYQVRAFDLRTNSPWSHLLIN--HGVHCIQGLRK-NNRKCLYTCAVRPAAIYGP   86 (366)
Q Consensus        10 ~~~~VlITGgtGfiG~~L~~~L~~~g~~~V~~~dr~~~~~~~~~~~~--~~v~~i~gDks-~~~~~l~~~ilRp~~iyGp   86 (366)
                      .+++|+|.| -|-.|..+++.|.+.|+ +|.+.|.+...+....+..  .++++..++.. ..-.+.+.+++-|+.-  +
T Consensus         6 ~~~~i~v~G-~G~sG~s~a~~L~~~G~-~v~~~D~~~~~~~~~~L~~~~~~~~~~~g~~~~~~~~~~d~vv~sp~I~--~   81 (498)
T PRK02006          6 QGPMVLVLG-LGESGLAMARWCARHGA-RLRVADTREAPPNLAALRAELPDAEFVGGPFDPALLDGVDLVALSPGLS--P   81 (498)
T ss_pred             CCCEEEEEe-ecHhHHHHHHHHHHCCC-EEEEEcCCCCchhHHHHHhhcCCcEEEeCCCchhHhcCCCEEEECCCCC--C
Confidence            457899996 55699999999999995 8999997654322222322  25566665411 1112445666655421  2


Q ss_pred             CCCCCHHHHHHHHHcCCCCeeecCCCcceeceeHHHHHHHHHHHHhccccCCCCCCCCCCCCCccEEecCCC-CCCHHHH
Q 017760           87 GEERHLPRIVSLAKLGLVPFKIGEPSVKTDWIYVDNLVLALILASMGLLDDIPGQKGRPIASGQPYFVSDGF-PINTFEF  165 (366)
Q Consensus        87 ~~~~~l~~~i~~~~~g~~~~~~g~~~~~~~~v~vdDla~a~~~a~~~l~~~~~~~~~~~~~~g~~y~I~~~~-~vs~~e~  165 (366)
                      ......+ .+..+++... .+.         ..++.+.+.+ ..+.           .+.....+..|++.. ..|..++
T Consensus        82 ~~~~~~~-~~~~a~~~~i-~v~---------~~~e~~~~~~-~~l~-----------~~~~~~~~I~VTGTnGKTTTt~m  138 (498)
T PRK02006         82 LEAALAP-LVAAARERGI-PVW---------GEIELFAQAL-AALG-----------ASGYAPKVLAITGTNGKTTTTAL  138 (498)
T ss_pred             cccccCH-HHHHHHHCCC-cEE---------EHHHHHHHHH-hhhc-----------cccCCCCEEEEECCCcHHHHHHH
Confidence            1100113 3333333221 222         1334443332 2211           111122567776632 3777888


Q ss_pred             HHHHHHhcCCC
Q 017760          166 IGPLLKTLDYD  176 (366)
Q Consensus       166 ~~~l~~~lg~~  176 (366)
                      +..+.+..|++
T Consensus       139 l~~iL~~~g~~  149 (498)
T PRK02006        139 TGLLCERAGKK  149 (498)
T ss_pred             HHHHHHHcCCC
Confidence            88888888765

>PTZ00117 malate dehydrogenase; Provisional

Probab=84.16  E-value=2  Score=40.77  Aligned_cols=38  Identities=21%  Similarity=0.423  Sum_probs=32.2

Q ss_pred             cCCeEEEEcCCChhHHHHHHHHHHcCCceEEEEecCCCC
Q 017760           10 EGKTFLVTGGLGHVGSALCLELVRRGAYQVRAFDLRTNS   48 (366)
Q Consensus        10 ~~~~VlITGgtGfiG~~L~~~L~~~g~~~V~~~dr~~~~   48 (366)
                      +.+||.|+|+ |.+|+.++..+...|..+++.+|+++..
T Consensus         4 ~~~KI~IIGa-G~vG~~ia~~l~~~~~~~l~L~Di~~~~   41 (319)
T PTZ00117          4 KRKKISMIGA-GQIGSTVALLILQKNLGDVVLYDVIKGV   41 (319)
T ss_pred             CCcEEEEECC-CHHHHHHHHHHHHCCCCeEEEEECCCcc
Confidence            4578999996 9999999999998885589999998654

>KOG4288 consensus Predicted oxidoreductase [General function prediction only]

Probab=83.90  E-value=1.4  Score=39.45  Aligned_cols=39  Identities=36%  Similarity=0.563  Sum_probs=32.9

Q ss_pred             CeEEEEcCCChhHHHHHHHHHHcCCceEEEEecCCCCccc
Q 017760           12 KTFLVTGGLGHVGSALCLELVRRGAYQVRAFDLRTNSPWS   51 (366)
Q Consensus        12 ~~VlITGgtGfiG~~L~~~L~~~g~~~V~~~dr~~~~~~~   51 (366)
                      ++..+.||+||+|.++|..+...|+ +|....|+....+.
T Consensus         3 ~k~~vfgg~gflg~~ic~~a~~sgy-~vvsvsrsgas~~s   41 (283)
T KOG4288|consen    3 PKLIVFGGNGFLGKRICQEAVTSGY-QVVSVSRSGASPHS   41 (283)
T ss_pred             ccceeecccccchhhhhHHHHhcCc-eEEEeccccCCCcC
Confidence            4678899999999999999999995 89999888655443

>PRK07502 cyclohexadienyl dehydrogenase; Validated

Probab=83.86  E-value=1.6  Score=41.04  Aligned_cols=37  Identities=22%  Similarity=0.284  Sum_probs=30.9

Q ss_pred             cCCeEEEEcCCChhHHHHHHHHHHcCC-ceEEEEecCCC
Q 017760           10 EGKTFLVTGGLGHVGSALCLELVRRGA-YQVRAFDLRTN   47 (366)
Q Consensus        10 ~~~~VlITGgtGfiG~~L~~~L~~~g~-~~V~~~dr~~~   47 (366)
                      ..++|.|.| +|-+|..++..|.+.|. ++|+++|+++.
T Consensus         5 ~~~~I~IIG-~G~mG~sla~~l~~~g~~~~V~~~dr~~~   42 (307)
T PRK07502          5 LFDRVALIG-IGLIGSSLARAIRRLGLAGEIVGADRSAE   42 (307)
T ss_pred             CCcEEEEEe-eCHHHHHHHHHHHhcCCCcEEEEEECCHH
Confidence            346899996 99999999999999884 47999998753

>PRK06035 3-hydroxyacyl-CoA dehydrogenase; Validated

Probab=83.71  E-value=1.7  Score=40.61  Aligned_cols=35  Identities=29%  Similarity=0.458  Sum_probs=30.5

Q ss_pred             CCeEEEEcCCChhHHHHHHHHHHcCCceEEEEecCCC
Q 017760           11 GKTFLVTGGLGHVGSALCLELVRRGAYQVRAFDLRTN   47 (366)
Q Consensus        11 ~~~VlITGgtGfiG~~L~~~L~~~g~~~V~~~dr~~~   47 (366)
                      .++|.|. |+|.+|..++..|.+.| ++|++.|+++.
T Consensus         3 i~~I~Vi-GaG~mG~~iA~~la~~G-~~V~l~d~~~~   37 (291)
T PRK06035          3 IKVIGVV-GSGVMGQGIAQVFARTG-YDVTIVDVSEE   37 (291)
T ss_pred             CcEEEEE-CccHHHHHHHHHHHhcC-CeEEEEeCCHH
Confidence            3689998 56999999999999999 49999998764

>cd08259 Zn_ADH5 Alcohol dehydrogenases of the MDR family

Probab=83.58  E-value=1.8  Score=40.47  Aligned_cols=36  Identities=36%  Similarity=0.329  Sum_probs=31.4

Q ss_pred             cCCeEEEEcCCChhHHHHHHHHHHcCCceEEEEecCC
Q 017760           10 EGKTFLVTGGLGHVGSALCLELVRRGAYQVRAFDLRT   46 (366)
Q Consensus        10 ~~~~VlITGgtGfiG~~L~~~L~~~g~~~V~~~dr~~   46 (366)
                      .+.+++|+||+|.+|..+++.+...|. +|+++++++
T Consensus       162 ~~~~vlI~ga~g~vG~~~~~~a~~~g~-~v~~~~~~~  197 (332)
T cd08259         162 KGDTVLVTGAGGGVGIHAIQLAKALGA-RVIAVTRSP  197 (332)
T ss_pred             CCCEEEEECCCCHHHHHHHHHHHHcCC-eEEEEeCCH
Confidence            357899999999999999999999995 898887654

NAD(P)(H)-dependent oxidoreductases are the major enzymes in the interconversion of alcohols and aldehydes, or ketones. This group contains proteins that share the characteristic catalytic and structural zinc-binding sites of the zinc-dependent alcohol dehydrogenase family. Alcohol dehydrogenase in the liver converts ethanol and NAD+ to acetaldehyde and NADH, while in yeast and some other microorganisms ADH catalyzes the conversion acetaldehyde to ethanol in alcoholic fermentation. ADH is a member of the medium chain alcohol dehydrogenase family (MDR), which have a NAD(P)(H)-binding domain in a Rossmann fold of a beta-alpha form. The NAD(H)-binding region is comprised of 2 structurally similar halves, each of which contacts a mononucleotide. A GxGxxG motif after the first mononucleotide contact half allows the close contact of the coenzyme with the ADH backbone. The N-terminal catalytic domain has a distant homology to GroES.

>PRK01438 murD UDP-N-acetylmuramoyl-L-alanyl-D-glutamate synthetase; Provisional

Probab=83.56  E-value=3.3  Score=41.61  Aligned_cols=55  Identities=25%  Similarity=0.272  Sum_probs=39.6

Q ss_pred             ccCCeEEEEcCCChhHHHHHHHHHHcCCceEEEEecCCCCcc---cccccCCCeEEEEcc
Q 017760            9 IEGKTFLVTGGLGHVGSALCLELVRRGAYQVRAFDLRTNSPW---SHLLINHGVHCIQGL   65 (366)
Q Consensus         9 ~~~~~VlITGgtGfiG~~L~~~L~~~g~~~V~~~dr~~~~~~---~~~~~~~~v~~i~gD   65 (366)
                      ..+++|+|.|+ |.+|..+++.|.++|. +|+++|.++....   ...+...++++..++
T Consensus        14 ~~~~~v~viG~-G~~G~~~A~~L~~~G~-~V~~~d~~~~~~~~~~~~~l~~~gv~~~~~~   71 (480)
T PRK01438         14 WQGLRVVVAGL-GVSGFAAADALLELGA-RVTVVDDGDDERHRALAAILEALGATVRLGP   71 (480)
T ss_pred             cCCCEEEEECC-CHHHHHHHHHHHHCCC-EEEEEeCCchhhhHHHHHHHHHcCCEEEECC
Confidence            34678999975 8899999999999995 8999997653221   122334577777664

>TIGR01470 cysG_Nterm siroheme synthase, N-terminal domain

Probab=83.46  E-value=2.5  Score=37.45  Aligned_cols=54  Identities=30%  Similarity=0.405  Sum_probs=38.1

Q ss_pred             ccCCeEEEEcCCChhHHHHHHHHHHcCCceEEEEecCCCCcccccc-cCCCeEEEEcc
Q 017760            9 IEGKTFLVTGGLGHVGSALCLELVRRGAYQVRAFDLRTNSPWSHLL-INHGVHCIQGL   65 (366)
Q Consensus         9 ~~~~~VlITGgtGfiG~~L~~~L~~~g~~~V~~~dr~~~~~~~~~~-~~~~v~~i~gD   65 (366)
                      .++++|+|. |+|-+|.+-++.|++.|. +|++++....+.. ..+ ...+++.+.++
T Consensus         7 l~gk~vlVv-GgG~va~rk~~~Ll~~ga-~VtVvsp~~~~~l-~~l~~~~~i~~~~~~   61 (205)
T TIGR01470         7 LEGRAVLVV-GGGDVALRKARLLLKAGA-QLRVIAEELESEL-TLLAEQGGITWLARC   61 (205)
T ss_pred             cCCCeEEEE-CcCHHHHHHHHHHHHCCC-EEEEEcCCCCHHH-HHHHHcCCEEEEeCC
Confidence            456899998 579999999999999996 8999875543221 122 22357777664

This model represents a subfamily of CysG N-terminal region-related sequences. All sequences in the seed alignment for this model are N-terminal regions of known or predicted siroheme synthases. The C-terminal region of each is uroporphyrin-III C-methyltransferase (EC 2.1.1.107), which catalyzes the first step committed to the biosynthesis of either siroheme or cobalamin (vitamin B12) rather than protoheme (heme). The region represented by this model completes the process of oxidation and iron insertion to yield siroheme. Siroheme is a cofactor for nitrite and sulfite reductases, so siroheme synthase is CysG of cysteine biosynthesis in some organisms.

>PF13241 NAD_binding_7: Putative NAD(P)-binding; PDB: 3DFZ_B 1PJT_A 1PJS_A 1PJQ_A 1KYQ_B

Probab=83.41  E-value=1.5  Score=34.19  Aligned_cols=36  Identities=33%  Similarity=0.519  Sum_probs=29.7

Q ss_pred             ccCCeEEEEcCCChhHHHHHHHHHHcCCceEEEEecCC
Q 017760            9 IEGKTFLVTGGLGHVGSALCLELVRRGAYQVRAFDLRT   46 (366)
Q Consensus         9 ~~~~~VlITGgtGfiG~~L~~~L~~~g~~~V~~~dr~~   46 (366)
                      .++++|+|.|| |-+|.+=++.|++.|. +|+.++...
T Consensus         5 l~~~~vlVvGg-G~va~~k~~~Ll~~gA-~v~vis~~~   40 (103)
T PF13241_consen    5 LKGKRVLVVGG-GPVAARKARLLLEAGA-KVTVISPEI   40 (103)
T ss_dssp             -TT-EEEEEEE-SHHHHHHHHHHCCCTB-EEEEEESSE
T ss_pred             cCCCEEEEECC-CHHHHHHHHHHHhCCC-EEEEECCch
Confidence            46789999977 9999999999999996 899997653

>TIGR03026 NDP-sugDHase nucleotide sugar dehydrogenase

Probab=83.27  E-value=1.6  Score=43.05  Aligned_cols=34  Identities=32%  Similarity=0.438  Sum_probs=29.9

Q ss_pred             CeEEEEcCCChhHHHHHHHHHHcCCceEEEEecCCC
Q 017760           12 KTFLVTGGLGHVGSALCLELVRRGAYQVRAFDLRTN   47 (366)
Q Consensus        12 ~~VlITGgtGfiG~~L~~~L~~~g~~~V~~~dr~~~   47 (366)
                      |+|.|. |.|++|..++..|.+.| ++|+++|+++.
T Consensus         1 mkI~vI-GlG~~G~~lA~~La~~G-~~V~~~d~~~~   34 (411)
T TIGR03026         1 MKIAVI-GLGYVGLPLAALLADLG-HEVTGVDIDQE   34 (411)
T ss_pred             CEEEEE-CCCchhHHHHHHHHhcC-CeEEEEECCHH
Confidence            368888 78999999999999999 59999998764

All of these enzymes contain three Pfam domains, pfam03721, pfam00984, and pfam03720 for the N-terminal, central, and C-terminal regions respectively.

>PRK14618 NAD(P)H-dependent glycerol-3-phosphate dehydrogenase; Provisional

Probab=82.93  E-value=1.9  Score=40.98  Aligned_cols=35  Identities=31%  Similarity=0.468  Sum_probs=30.6

Q ss_pred             CCeEEEEcCCChhHHHHHHHHHHcCCceEEEEecCCC
Q 017760           11 GKTFLVTGGLGHVGSALCLELVRRGAYQVRAFDLRTN   47 (366)
Q Consensus        11 ~~~VlITGgtGfiG~~L~~~L~~~g~~~V~~~dr~~~   47 (366)
                      +|+|.|. |+|-+|..++..|.+.| ++|++.+|++.
T Consensus         4 ~m~I~iI-G~G~mG~~ia~~L~~~G-~~V~~~~r~~~   38 (328)
T PRK14618          4 GMRVAVL-GAGAWGTALAVLAASKG-VPVRLWARRPE   38 (328)
T ss_pred             CCeEEEE-CcCHHHHHHHHHHHHCC-CeEEEEeCCHH
Confidence            4689998 78999999999999999 69999998643

>PRK10669 putative cation:proton antiport protein; Provisional

Probab=82.80  E-value=1.2  Score=45.89  Aligned_cols=50  Identities=24%  Similarity=0.383  Sum_probs=38.6

Q ss_pred             CeEEEEcCCChhHHHHHHHHHHcCCceEEEEecCCCCcccccccCCCeEEEEcc
Q 017760           12 KTFLVTGGLGHVGSALCLELVRRGAYQVRAFDLRTNSPWSHLLINHGVHCIQGL   65 (366)
Q Consensus        12 ~~VlITGgtGfiG~~L~~~L~~~g~~~V~~~dr~~~~~~~~~~~~~~v~~i~gD   65 (366)
                      .+|+|. |.|-+|+++++.|.++| ++|+++|.++..  .+.....+...+.||
T Consensus       418 ~hiiI~-G~G~~G~~la~~L~~~g-~~vvvId~d~~~--~~~~~~~g~~~i~GD  467 (558)
T PRK10669        418 NHALLV-GYGRVGSLLGEKLLAAG-IPLVVIETSRTR--VDELRERGIRAVLGN  467 (558)
T ss_pred             CCEEEE-CCChHHHHHHHHHHHCC-CCEEEEECCHHH--HHHHHHCCCeEEEcC
Confidence            567877 78999999999999999 589999987643  233334567777777

>cd08295 double_bond_reductase_like Arabidopsis alkenal double bond reductase and leukotriene B4 12-hydroxydehydrogenase

Probab=82.38  E-value=2.1  Score=40.58  Aligned_cols=36  Identities=22%  Similarity=0.231  Sum_probs=31.4

Q ss_pred             cCCeEEEEcCCChhHHHHHHHHHHcCCceEEEEecCC
Q 017760           10 EGKTFLVTGGLGHVGSALCLELVRRGAYQVRAFDLRT   46 (366)
Q Consensus        10 ~~~~VlITGgtGfiG~~L~~~L~~~g~~~V~~~dr~~   46 (366)
                      .+.+|+|+||+|-+|..+++.+...|. +|+++++++
T Consensus       151 ~g~~VlI~Ga~G~vG~~aiqlAk~~G~-~Vi~~~~~~  186 (338)
T cd08295         151 KGETVFVSAASGAVGQLVGQLAKLKGC-YVVGSAGSD  186 (338)
T ss_pred             CCCEEEEecCccHHHHHHHHHHHHcCC-EEEEEeCCH
Confidence            467999999999999999999999997 788887664

This group includes proteins identified as the Arabidopsis alkenal double bond reductase and leukotriene B4 12-hydroxydehydrogenase. The Arabidopsis enzyme, a member of the medium chain dehydrogenase/reductase family, catalyzes the reduction of 7-8-double bond of phenylpropanal substrates as a plant defense mechanism. Prostaglandins and related eicosanoids (lipid mediators involved in host defense and inflamation) are metabolized by the oxidation of the 15(S)-hydroxyl group of the NAD+-dependent (type I 15-PGDH) 15-prostaglandin dehydrogenase (15-PGDH) followed by reduction by NADPH/NADH-dependent (type II 15-PGDH) delta-13 15-prostaglandin reductase (13-PGR) to 15-keto-13,14,-dihydroprostaglandins. 13-PGR is a bifunctional enzyme, since it also has leukotriene B(4) 12-hydroxydehydrogenase activity. Leukotriene B4 (LTB4) can be metabolized by LTB4 20-hydroxylase in

>PRK06598 aspartate-semialdehyde dehydrogenase; Reviewed

Probab=82.32  E-value=2.7  Score=40.67  Aligned_cols=35  Identities=26%  Similarity=0.203  Sum_probs=25.3

Q ss_pred             CCeEEEEcCCChhHHHHHHHHHH-cCC--ceEEEEecC
Q 017760           11 GKTFLVTGGLGHVGSALCLELVR-RGA--YQVRAFDLR   45 (366)
Q Consensus        11 ~~~VlITGgtGfiG~~L~~~L~~-~g~--~~V~~~dr~   45 (366)
                      |++|.|.||||++|+.+.+.+++ +..  .+++.+...
T Consensus         1 m~~VAIVGATG~vG~ell~llL~~~~f~~~~l~~~ss~   38 (369)
T PRK06598          1 MKKVGFVGWRGMVGSVLMQRMVEENDFDLIEPVFFSTS   38 (369)
T ss_pred             CeEEEEEeCCCHHHHHHHHHHHhCCCCCcCcEEEecch
Confidence            36899999999999999995555 443  126665543

>TIGR02853 spore_dpaA dipicolinic acid synthetase, A subunit

Probab=82.09  E-value=2.4  Score=39.69  Aligned_cols=37  Identities=24%  Similarity=0.310  Sum_probs=31.8

Q ss_pred             ccCCeEEEEcCCChhHHHHHHHHHHcCCceEEEEecCCC
Q 017760            9 IEGKTFLVTGGLGHVGSALCLELVRRGAYQVRAFDLRTN   47 (366)
Q Consensus         9 ~~~~~VlITGgtGfiG~~L~~~L~~~g~~~V~~~dr~~~   47 (366)
                      ..+++++|+|. |.+|+.+++.|...|. +|+..+|++.
T Consensus       149 l~gk~v~IiG~-G~iG~avA~~L~~~G~-~V~v~~R~~~  185 (287)
T TIGR02853       149 IHGSNVMVLGF-GRTGMTIARTFSALGA-RVFVGARSSA  185 (287)
T ss_pred             CCCCEEEEEcC-hHHHHHHHHHHHHCCC-EEEEEeCCHH
Confidence            45789999966 7799999999999996 8999988753

This predicted Rossman fold-containing protein is the A subunit of dipicolinic acid synthetase as found in most, though not all, endospore-forming low-GC Gram-positive bacteria; it is absent in Clostridium. The B subunit is represented by TIGR02852. This protein is also known as SpoVFA.

>cd05292 LDH_2 A subgroup of L-lactate dehydrogenases

Probab=82.07  E-value=2.4  Score=40.05  Aligned_cols=35  Identities=26%  Similarity=0.452  Sum_probs=30.3

Q ss_pred             CeEEEEcCCChhHHHHHHHHHHcCC-ceEEEEecCCC
Q 017760           12 KTFLVTGGLGHVGSALCLELVRRGA-YQVRAFDLRTN   47 (366)
Q Consensus        12 ~~VlITGgtGfiG~~L~~~L~~~g~-~~V~~~dr~~~   47 (366)
                      |+|.|.|+ |.+|..++..|..+|. ++|.++|++..
T Consensus         1 mkI~IIGa-G~VG~~~a~~l~~~g~~~ev~l~D~~~~   36 (308)
T cd05292           1 MKVAIVGA-GFVGSTTAYALLLRGLASEIVLVDINKA   36 (308)
T ss_pred             CEEEEECC-CHHHHHHHHHHHHcCCCCEEEEEECCch
Confidence            47999987 9999999999999983 58999999864

L-lactate dehydrogenases (LDH) are tetrameric enzymes catalyzing the last step of glycolysis in which pyruvate is converted to L-lactate. This subgroup is composed predominantly of bacterial LDHs and a few fungal LDHs. Bacterial LDHs may be non-allosteric or may be activated by an allosteric effector such as fructose-1,6-bisphosphate. LDHs are part of the NAD(P)-binding Rossmann fold superfamily, which includes a wide variety of protein families including the NAD(P)-binding domains of alcohol dehydrogenases, tyrosine-dependent oxidoreductases, glyceraldehyde-3-phosphate dehydrogenases, formate/glycerate dehydrogenases, siroheme synthases, 6-phosphogluconate dehydrogenases, aminoacid dehydrogenases, repressor rex, and NAD-binding potassium channel domains, among others.

>cd05293 LDH_1 A subgroup of L-lactate dehydrogenases

Probab=81.97  E-value=2.8  Score=39.70  Aligned_cols=36  Identities=22%  Similarity=0.395  Sum_probs=30.5

Q ss_pred             CCeEEEEcCCChhHHHHHHHHHHcCC-ceEEEEecCCC
Q 017760           11 GKTFLVTGGLGHVGSALCLELVRRGA-YQVRAFDLRTN   47 (366)
Q Consensus        11 ~~~VlITGgtGfiG~~L~~~L~~~g~-~~V~~~dr~~~   47 (366)
                      .+||.|+|+ |.+|+.++..|...|. .++.++|++..
T Consensus         3 ~~Ki~IiGa-G~VG~~~a~~l~~~~~~~el~LiD~~~~   39 (312)
T cd05293           3 RNKVTVVGV-GQVGMACAISILAKGLADELVLVDVVED   39 (312)
T ss_pred             CCEEEEECC-CHHHHHHHHHHHhcCCCCEEEEEeCCcc
Confidence            468999995 9999999999988773 57999998764

L-lactate dehydrogenases (LDH) are tetrameric enzymes catalyzing the last step of glycolysis in which pyruvate is converted to L-lactate. This subgroup is composed of eukaryotic LDHs. Vertebrate LDHs are non-allosteric. This is in contrast to some bacterial LDHs that are activated by an allosteric effector such as fructose-1,6-bisphosphate. LDHs are part of the NAD(P)-binding Rossmann fold superfamily, which includes a wide variety of protein families including the NAD(P)-binding domains of alcohol dehydrogenases, tyrosine-dependent oxidoreductases, glyceraldehyde-3-phosphate dehydrogenases, formate/glycerate dehydrogenases, siroheme synthases, 6-phosphogluconate dehydrogenases, aminoacid dehydrogenases, repressor rex, and NAD-binding potassium channel domains, among others.

>cd05212 NAD_bind_m-THF_DH_Cyclohyd_like NAD(P) binding domain of methylene-tetrahydrofolate dehydrogenase and methylene-tetrahydrofolate dehydrogenase/cyclohydrolase

Probab=81.70  E-value=3.9  Score=33.89  Aligned_cols=38  Identities=42%  Similarity=0.575  Sum_probs=33.8

Q ss_pred             cccCCeEEEEcCCChhHHHHHHHHHHcCCceEEEEecCC
Q 017760            8 GIEGKTFLVTGGLGHVGSALCLELVRRGAYQVRAFDLRT   46 (366)
Q Consensus         8 ~~~~~~VlITGgtGfiG~~L~~~L~~~g~~~V~~~dr~~   46 (366)
                      ..++++|+|.|.+.-+|..++..|.++|. +|...+.+.
T Consensus        25 ~~~gk~v~VvGrs~~vG~pla~lL~~~ga-tV~~~~~~t   62 (140)
T cd05212          25 RLDGKKVLVVGRSGIVGAPLQCLLQRDGA-TVYSCDWKT   62 (140)
T ss_pred             CCCCCEEEEECCCchHHHHHHHHHHHCCC-EEEEeCCCC
Confidence            35689999999999999999999999996 899997654

NAD(P) binding domains of methylene-tetrahydrofolate dehydrogenase (m-THF DH) and m-THF DH/cyclohydrolase bifunctional enzymes (m-THF DH/cyclohydrolase). M-THF is a versatile carrier of activated one-carbon units. The major one-carbon folate donors are N-5 methyltetrahydrofolate, N5,N10-m-THF, and N10-formayltetrahydrofolate. The oxidation of metabolic intermediate m-THF to m-THF requires the enzyme m-THF DH. In addition, most DHs also have an associated cyclohydrolase activity which catalyzes its hydrolysis to N10-formyltetrahydrofolate. m-THF DH is typically found as part of a multifunctional protein in eukaryotes. NADP-dependent m-THF DH in mammals, birds and yeast are components of a trifunctional enzyme with DH, cyclohydrolase, and synthetase activities. Certain eukaryotic cells also contain homodimeric bifunctional

>PRK14188 bifunctional 5,10-methylene-tetrahydrofolate dehydrogenase/ 5,10-methylene-tetrahydrofolate cyclohydrolase; Provisional

Probab=81.64  E-value=2.9  Score=39.21  Aligned_cols=34  Identities=24%  Similarity=0.291  Sum_probs=31.5

Q ss_pred             ccCCeEEEEcCCChhHHHHHHHHHHcCCceEEEEe
Q 017760            9 IEGKTFLVTGGLGHVGSALCLELVRRGAYQVRAFD   43 (366)
Q Consensus         9 ~~~~~VlITGgtGfiG~~L~~~L~~~g~~~V~~~d   43 (366)
                      ..+++|+|.|.+|.+|..++..|+++|+ +|+..+
T Consensus       156 ~~Gk~V~viGrs~~mG~PmA~~L~~~g~-tVtv~~  189 (296)
T PRK14188        156 LSGLNAVVIGRSNLVGKPMAQLLLAANA-TVTIAH  189 (296)
T ss_pred             CCCCEEEEEcCCcchHHHHHHHHHhCCC-EEEEEC
Confidence            5689999999999999999999999995 899995

>KOG1478 consensus 3-keto sterol reductase [Lipid transport and metabolism]

Probab=81.48  E-value=2.2  Score=38.89  Aligned_cols=78  Identities=17%  Similarity=0.107  Sum_probs=48.3

Q ss_pred             cCCeEEEEcCCChhHHHHHHHHHHcCCc----eEEEEecCCCCccc--ccc---c---CCCeEEEEcccc----------
Q 017760           10 EGKTFLVTGGLGHVGSALCLELVRRGAY----QVRAFDLRTNSPWS--HLL---I---NHGVHCIQGLRK----------   67 (366)
Q Consensus        10 ~~~~VlITGgtGfiG~~L~~~L~~~g~~----~V~~~dr~~~~~~~--~~~---~---~~~v~~i~gDks----------   67 (366)
                      ..+-++|||++.-+|-++|.+|++..-.    ++....|+.++...  .++   .   .-++++++.|-+          
T Consensus         2 ~RKvalITGanSglGl~i~~RLl~~~De~~~ltl~ltcR~~~kae~vc~~lk~f~p~~~i~~~yvlvD~sNm~Sv~~A~~   81 (341)
T KOG1478|consen    2 MRKVALITGANSGLGLAICKRLLAEDDENVRLTLCLTCRNMSKAEAVCAALKAFHPKSTIEVTYVLVDVSNMQSVFRASK   81 (341)
T ss_pred             CceEEEEecCCCcccHHHHHHHHhccCCceeEEEEEEeCChhHHHHHHHHHHHhCCCceeEEEEEEEehhhHHHHHHHHH
Confidence            3456899999999999999999986411    25555666554322  111   1   236788888811          


Q ss_pred             ---CCCCCceEEEEeCCccccCC
Q 017760           68 ---NNRKCLYTCAVRPAAIYGPG   87 (366)
Q Consensus        68 ---~~~~~l~~~ilRp~~iyGp~   87 (366)
                         .+-..++.+-+..+..--|+
T Consensus        82 di~~rf~~ld~iylNAg~~~~~g  104 (341)
T KOG1478|consen   82 DIKQRFQRLDYIYLNAGIMPNPG  104 (341)
T ss_pred             HHHHHhhhccEEEEccccCCCCc
Confidence               22235667777665544444

>COG0002 ArgC Acetylglutamate semialdehyde dehydrogenase [Amino acid transport and metabolism]

Probab=81.30  E-value=2.2  Score=40.56  Aligned_cols=36  Identities=17%  Similarity=0.088  Sum_probs=28.9

Q ss_pred             CCeEEEEcCCChhHHHHHHHHHHcCCceEEEEecCC
Q 017760           11 GKTFLVTGGLGHVGSALCLELVRRGAYQVRAFDLRT   46 (366)
Q Consensus        11 ~~~VlITGgtGfiG~~L~~~L~~~g~~~V~~~dr~~   46 (366)
                      |+||.|.||+||-|..|.+.|.+...-++.....+.
T Consensus         2 ~~kV~IvGasGYtG~EL~rlL~~Hp~ve~~~~ss~~   37 (349)
T COG0002           2 MIKVGIVGASGYTGLELLRLLAGHPDVELILISSRE   37 (349)
T ss_pred             CceEEEEcCCCCcHHHHHHHHhcCCCeEEEEeechh
Confidence            579999999999999999999998633555554443

>PF00899 ThiF: ThiF family; InterPro: IPR000594 Ubiquitin-activating enzyme (E1 enzyme) [, ] activates ubiquitin by first adenylating with ATP its C-terminal glycine residue and thereafter linking this residue to the side chain of a cysteine residue in E1, yielding an ubiquitin-E1 thiolester and free AMP

Probab=81.21  E-value=3  Score=34.02  Aligned_cols=35  Identities=31%  Similarity=0.461  Sum_probs=29.2

Q ss_pred             CCeEEEEcCCChhHHHHHHHHHHcCCceEEEEecCC
Q 017760           11 GKTFLVTGGLGHVGSALCLELVRRGAYQVRAFDLRT   46 (366)
Q Consensus        11 ~~~VlITGgtGfiG~~L~~~L~~~g~~~V~~~dr~~   46 (366)
                      ..+|+|. |.|-+|+.+++.|.+.|..+++.+|...
T Consensus         2 ~~~v~ii-G~G~vGs~va~~L~~~Gv~~i~lvD~d~   36 (135)
T PF00899_consen    2 NKRVLII-GAGGVGSEVAKNLARSGVGKITLVDDDI   36 (135)
T ss_dssp             T-EEEEE-STSHHHHHHHHHHHHHTTSEEEEEESSB
T ss_pred             CCEEEEE-CcCHHHHHHHHHHHHhCCCceeecCCcc
Confidence            3578888 6788999999999999987899998664

Later the ubiquitin moiety is transferred to a cysteine residue on one of the many forms of ubiquitin- conjugating enzymes (E2). The family of ubiquitin-activating enzymes shares in its catalytic domain significant similarity with a large family of NAD/FAD-binding proteins. This domain is based on the common NAD/FAD-binding fold and finds members of several families, including UBA ubiquitin activating enzymes; the hesA/moeB/thiF family; NADH peroxidases; the LDH family; sarcosin oxidase; phytoene dehydrogenases; alanine dehydrogenases; hydroxyacyl-CoA dehydrogenases and many other NAD/FAD dependent dehydrogenases and oxidases.; GO: 0003824 catalytic activity; PDB: 1ZKM_D 1ZUD_3 1ZFN_D 1R4M_G 2NVU_A 1R4N_C 3DBR_A 3DBH_C 3DBL_G 1YOV_A ....

>COG0287 TyrA Prephenate dehydrogenase [Amino acid transport and metabolism]

Probab=81.19  E-value=2.9  Score=38.97  Aligned_cols=37  Identities=24%  Similarity=0.355  Sum_probs=29.1

Q ss_pred             CCeEEEEcCCChhHHHHHHHHHHcCCceEEEEecCCCCc
Q 017760           11 GKTFLVTGGLGHVGSALCLELVRRGAYQVRAFDLRTNSP   49 (366)
Q Consensus        11 ~~~VlITGgtGfiG~~L~~~L~~~g~~~V~~~dr~~~~~   49 (366)
                      +++|+|. |.|.+|..+++.|.++|+ .|.+++++....
T Consensus         3 ~~~v~Iv-G~GliG~s~a~~l~~~g~-~v~i~g~d~~~~   39 (279)
T COG0287           3 SMKVGIV-GLGLMGGSLARALKEAGL-VVRIIGRDRSAA   39 (279)
T ss_pred             CcEEEEE-CCchHHHHHHHHHHHcCC-eEEEEeecCcHH
Confidence            3566665 699999999999999994 787887776543

>PF02882 THF_DHG_CYH_C: Tetrahydrofolate dehydrogenase/cyclohydrolase, NAD(P)-binding domain; InterPro: IPR020631 Enzymes that participate in the transfer of one-carbon units require the coenzyme tetrahydrofolate (THF)

Probab=81.01  E-value=3.7  Score=34.83  Aligned_cols=37  Identities=35%  Similarity=0.551  Sum_probs=30.0

Q ss_pred             ccCCeEEEEcCCChhHHHHHHHHHHcCCceEEEEecCC
Q 017760            9 IEGKTFLVTGGLGHVGSALCLELVRRGAYQVRAFDLRT   46 (366)
Q Consensus         9 ~~~~~VlITGgtGfiG~~L~~~L~~~g~~~V~~~dr~~   46 (366)
                      .++++++|.|.++.+|.-|+..|.++|+ .|+......
T Consensus        34 l~Gk~v~VvGrs~~VG~Pla~lL~~~~a-tVt~~h~~T   70 (160)
T PF02882_consen   34 LEGKKVVVVGRSNIVGKPLAMLLLNKGA-TVTICHSKT   70 (160)
T ss_dssp             TTT-EEEEE-TTTTTHHHHHHHHHHTT--EEEEE-TTS
T ss_pred             CCCCEEEEECCcCCCChHHHHHHHhCCC-eEEeccCCC
Confidence            5689999999999999999999999996 899987664

Various reactions generate one-carbon derivatives of THF, which can be interconverted between different oxidation states by methylene-THF dehydrogenase (1.5.1.5 from EC), methenyl-THF cyclohydrolase (3.5.4.9 from EC) and formyl-THF synthetase (6.3.4.3 from EC) [, ]. The dehydrogenase and cyclohydrolase activities are expressed by a variety of multifunctional enzymes, including the tri-functional eukaryotic C1-tetrahydrofolate synthase []; a bifunctional eukaryotic mitochondrial protein; and the bifunctional Escherichia coli folD protein [, ]. Methylene-tetrahydrofolate dehydrogenase and methenyltetrahydrofolate cyclo-hydrolase share an overlapping active site [], and as such are usually located together in proteins, acting in tandem on the carbon-nitrogen bonds of substrates other than peptide bonds. This entry represents the NAD(P)-binding domain found in these enzymes.; GO: 0003824 catalytic activity, 0004488 methylenetetrahydrofolate dehydrogenase (NADP+) activity, 0009396 folic acid-containing compound biosynthetic process, 0055114 oxidation-reduction process; PDB: 1B0A_A 2C2X_B 2C2Y_A 3NGL_C 3NGX_A 4A26_B 1EDZ_A 1EE9_A 3P2O_B 1DIA_A ....

>TIGR00507 aroE shikimate 5-dehydrogenase

Probab=80.72  E-value=2.9  Score=38.64  Aligned_cols=36  Identities=19%  Similarity=0.339  Sum_probs=31.0

Q ss_pred             cCCeEEEEcCCChhHHHHHHHHHHcCCceEEEEecCCC
Q 017760           10 EGKTFLVTGGLGHVGSALCLELVRRGAYQVRAFDLRTN   47 (366)
Q Consensus        10 ~~~~VlITGgtGfiG~~L~~~L~~~g~~~V~~~dr~~~   47 (366)
                      .+++++|+|+ |-+|++++..|.+.|. +|.+++|+..
T Consensus       116 ~~k~vliiGa-Gg~g~aia~~L~~~g~-~v~v~~R~~~  151 (270)
T TIGR00507       116 PNQRVLIIGA-GGAARAVALPLLKADC-NVIIANRTVS  151 (270)
T ss_pred             cCCEEEEEcC-cHHHHHHHHHHHHCCC-EEEEEeCCHH
Confidence            3578999987 7899999999999995 8999988753

This model finds proteins from prokaryotes and functionally equivalent domains from larger, multifunctional proteins of fungi and plants. Below the trusted cutoff of 180, but above the noise cutoff of 20, are the putative shikimate dehydrogenases of Thermotoga maritima and Mycobacterium tuberculosis, and uncharacterized paralogs of shikimate dehydrogenase from E. coli and H. influenzae. The related enzyme quinate 5-dehydrogenase scores below the noise cutoff. A neighbor-joining tree, constructed with quinate 5-dehydrogenases as the outgroup, shows the Clamydial homolog as clustering among the shikimate dehydrogenases, although the sequence is unusual in the degree of sequence divergence and the presence of an additional N-terminal domain.

>PRK06019 phosphoribosylaminoimidazole carboxylase ATPase subunit; Reviewed

Probab=80.63  E-value=3.2  Score=40.31  Aligned_cols=36  Identities=33%  Similarity=0.461  Sum_probs=30.9

Q ss_pred             CCeEEEEcCCChhHHHHHHHHHHcCCceEEEEecCCCC
Q 017760           11 GKTFLVTGGLGHVGSALCLELVRRGAYQVRAFDLRTNS   48 (366)
Q Consensus        11 ~~~VlITGgtGfiG~~L~~~L~~~g~~~V~~~dr~~~~   48 (366)
                      |++|+|.|| |.+|.-++..+.+.|+ +|+++|.++..
T Consensus         2 ~~~igilG~-Gql~~ml~~aa~~lG~-~v~~~d~~~~~   37 (372)
T PRK06019          2 MKTIGIIGG-GQLGRMLALAAAPLGY-KVIVLDPDPDS   37 (372)
T ss_pred             CCEEEEECC-CHHHHHHHHHHHHcCC-EEEEEeCCCCC
Confidence            578999977 7999999999999995 89999976543

>cd01483 E1_enzyme_family Superfamily of activating enzymes (E1) of the ubiquitin-like proteins

Probab=80.40  E-value=3.1  Score=34.27  Aligned_cols=34  Identities=32%  Similarity=0.531  Sum_probs=28.8

Q ss_pred             eEEEEcCCChhHHHHHHHHHHcCCceEEEEecCCC
Q 017760           13 TFLVTGGLGHVGSALCLELVRRGAYQVRAFDLRTN   47 (366)
Q Consensus        13 ~VlITGgtGfiG~~L~~~L~~~g~~~V~~~dr~~~   47 (366)
                      +|+|.|. |-+|+.+++.|.+.|..+++++|...-
T Consensus         1 ~VliiG~-GglGs~ia~~L~~~Gv~~i~ivD~d~v   34 (143)
T cd01483           1 RVLLVGL-GGLGSEIALNLARSGVGKITLIDFDTV   34 (143)
T ss_pred             CEEEECC-CHHHHHHHHHHHHCCCCEEEEEcCCCc
Confidence            5788865 899999999999999878999987643

This family includes classical ubiquitin-activating enzymes E1, ubiquitin-like (ubl) activating enzymes and other mechanistic homologes, like MoeB, Thif1 and others. The common reaction mechanism catalyzed by MoeB, ThiF and the E1 enzymes begins with a nucleophilic attack of the C-terminal carboxylate of MoaD, ThiS and ubiquitin, respectively, on the alpha-phosphate of an ATP molecule bound at the active site of the activating enzymes, leading to the formation of a high-energy acyladenylate intermediate and subsequently to the formation of a thiocarboxylate at the C termini of MoaD and ThiS.

>PRK00048 dihydrodipicolinate reductase; Provisional

Probab=80.36  E-value=3.6  Score=37.76  Aligned_cols=35  Identities=20%  Similarity=0.191  Sum_probs=27.2

Q ss_pred             CCeEEEEcCCChhHHHHHHHHHHc-CCceEEE-EecCC
Q 017760           11 GKTFLVTGGLGHVGSALCLELVRR-GAYQVRA-FDLRT   46 (366)
Q Consensus        11 ~~~VlITGgtGfiG~~L~~~L~~~-g~~~V~~-~dr~~   46 (366)
                      +++|.|+|++|.+|+.+++.+.+. +. ++.+ +|+++
T Consensus         1 ~mkV~IiG~~G~mG~~i~~~l~~~~~~-elvav~d~~~   37 (257)
T PRK00048          1 MIKVAVAGASGRMGRELIEAVEAAEDL-ELVAAVDRPG   37 (257)
T ss_pred             CcEEEEECCCCHHHHHHHHHHHhCCCC-EEEEEEecCC
Confidence            368999999999999999998875 54 6665 45443

>PF01210 NAD_Gly3P_dh_N: NAD-dependent glycerol-3-phosphate dehydrogenase N-terminus; InterPro: IPR011128 NAD-dependent glycerol-3-phosphate dehydrogenase (GPDH) catalyses the interconversion of dihydroxyacetone phosphate and L-glycerol-3-phosphate

Probab=80.30  E-value=2.9  Score=35.23  Aligned_cols=32  Identities=28%  Similarity=0.393  Sum_probs=28.5

Q ss_pred             eEEEEcCCChhHHHHHHHHHHcCCceEEEEecCC
Q 017760           13 TFLVTGGLGHVGSALCLELVRRGAYQVRAFDLRT   46 (366)
Q Consensus        13 ~VlITGgtGfiG~~L~~~L~~~g~~~V~~~dr~~   46 (366)
                      ||.|. |+|-.|.+++..|.++| ++|...++++
T Consensus         1 KI~Vi-GaG~~G~AlA~~la~~g-~~V~l~~~~~   32 (157)
T PF01210_consen    1 KIAVI-GAGNWGTALAALLADNG-HEVTLWGRDE   32 (157)
T ss_dssp             EEEEE-SSSHHHHHHHHHHHHCT-EEEEEETSCH
T ss_pred             CEEEE-CcCHHHHHHHHHHHHcC-CEEEEEeccH
Confidence            57788 77999999999999999 7999998875

This family represents the N-terminal NAD-binding domain [].; GO: 0016616 oxidoreductase activity, acting on the CH-OH group of donors, NAD or NADP as acceptor, 0051287 NAD binding, 0046168 glycerol-3-phosphate catabolic process, 0055114 oxidation-reduction process, 0005737 cytoplasm; PDB: 1YJ8_B 2PLA_A 1WPQ_B 1X0V_A 1X0X_A 1BG6_A 1TXG_B 1N1G_A 1M67_A 1JDJ_A ....

>COG0665 DadA Glycine/D-amino acid oxidases (deaminating) [Amino acid transport and metabolism]

Probab=80.30  E-value=3.2  Score=39.98  Aligned_cols=37  Identities=24%  Similarity=0.335  Sum_probs=31.9

Q ss_pred             cCCeEEEEcCCChhHHHHHHHHHHcCCceEEEEecCCCC
Q 017760           10 EGKTFLVTGGLGHVGSALCLELVRRGAYQVRAFDLRTNS   48 (366)
Q Consensus        10 ~~~~VlITGgtGfiG~~L~~~L~~~g~~~V~~~dr~~~~   48 (366)
                      ++++|+|.| .|.+|...+.+|.++|. +|+.++.....
T Consensus         3 ~~~~vvVIG-gGi~Gls~A~~La~~G~-~V~vie~~~~~   39 (387)
T COG0665           3 MKMDVVIIG-GGIVGLSAAYYLAERGA-DVTVLEAGEAG   39 (387)
T ss_pred             CcceEEEEC-CcHHHHHHHHHHHHcCC-EEEEEecCccC
Confidence            456789997 99999999999999995 89999887643

>PLN02520 bifunctional 3-dehydroquinate dehydratase/shikimate dehydrogenase

Probab=80.26  E-value=3  Score=42.60  Aligned_cols=36  Identities=33%  Similarity=0.510  Sum_probs=31.5

Q ss_pred             ccCCeEEEEcCCChhHHHHHHHHHHcCCceEEEEecCC
Q 017760            9 IEGKTFLVTGGLGHVGSALCLELVRRGAYQVRAFDLRT   46 (366)
Q Consensus         9 ~~~~~VlITGgtGfiG~~L~~~L~~~g~~~V~~~dr~~   46 (366)
                      +++++++|+|+ |-+|++++..|.+.|. +|.+++|+.
T Consensus       377 ~~~k~vlIlGa-GGagrAia~~L~~~G~-~V~i~nR~~  412 (529)
T PLN02520        377 LAGKLFVVIGA-GGAGKALAYGAKEKGA-RVVIANRTY  412 (529)
T ss_pred             CCCCEEEEECC-cHHHHHHHHHHHHCCC-EEEEEcCCH
Confidence            45688999988 7999999999999997 899998764

>PF00670 AdoHcyase_NAD: S-adenosyl-L-homocysteine hydrolase, NAD binding domain; InterPro: IPR015878 S-adenosyl-L-homocysteine hydrolase (3

Probab=80.25  E-value=2.9  Score=35.48  Aligned_cols=91  Identities=19%  Similarity=0.210  Sum_probs=49.7

Q ss_pred             ccccCCeEEEEcCCChhHHHHHHHHHHcCCceEEEEecCCCCcccccccCCCeEEEEccccCCCCCceEEEEeCCccccC
Q 017760            7 EGIEGKTFLVTGGLGHVGSALCLELVRRGAYQVRAFDLRTNSPWSHLLINHGVHCIQGLRKNNRKCLYTCAVRPAAIYGP   86 (366)
Q Consensus         7 ~~~~~~~VlITGgtGfiG~~L~~~L~~~g~~~V~~~dr~~~~~~~~~~~~~~v~~i~gDks~~~~~l~~~ilRp~~iyGp   86 (366)
                      .++.+++++|+ |-|.+|+.+++.|...|. +|+..+++|-..  -+...++.+....++......+-.|+        -
T Consensus        19 ~~l~Gk~vvV~-GYG~vG~g~A~~lr~~Ga-~V~V~e~DPi~a--lqA~~dGf~v~~~~~a~~~adi~vta--------T   86 (162)
T PF00670_consen   19 LMLAGKRVVVI-GYGKVGKGIARALRGLGA-RVTVTEIDPIRA--LQAAMDGFEVMTLEEALRDADIFVTA--------T   86 (162)
T ss_dssp             S--TTSEEEEE---SHHHHHHHHHHHHTT--EEEEE-SSHHHH--HHHHHTT-EEE-HHHHTTT-SEEEE---------S
T ss_pred             eeeCCCEEEEe-CCCcccHHHHHHHhhCCC-EEEEEECChHHH--HHhhhcCcEecCHHHHHhhCCEEEEC--------C
Confidence            35668889988 789999999999999996 899998876322  12223566666554444444442222        2


Q ss_pred             CCCCC-HHHHHHHHHcCCCCeeec
Q 017760           87 GEERH-LPRIVSLAKLGLVPFKIG  109 (366)
Q Consensus        87 ~~~~~-l~~~i~~~~~g~~~~~~g  109 (366)
                      |.... ....+..+++|-.+.-.|
T Consensus        87 G~~~vi~~e~~~~mkdgail~n~G  110 (162)
T PF00670_consen   87 GNKDVITGEHFRQMKDGAILANAG  110 (162)
T ss_dssp             SSSSSB-HHHHHHS-TTEEEEESS
T ss_pred             CCccccCHHHHHHhcCCeEEeccC
Confidence            22232 245666677776544334

3.1.1 from EC) (AdoHcyase) is an enzyme of the activated methyl cycle, responsible for the reversible hydration of S-adenosyl-L-homocysteine into adenosine and homocysteine. AdoHcyase is an ubiquitous enzyme which binds and requires NAD+ as a cofactor. AdoHcyase is a highly conserved protein [] of about 430 to 470 amino acids. This entry represents the glycine-rich region in the central part of AdoHcyase, which is thought to be involved in NAD-binding.; GO: 0004013 adenosylhomocysteinase activity; PDB: 2ZJ1_C 3DHY_B 2ZIZ_C 2ZJ0_D 3CE6_B 3GLQ_B 3D64_A 3G1U_C 1A7A_A 3NJ4_C ....

>PRK12549 shikimate 5-dehydrogenase; Reviewed

Probab=80.20  E-value=3  Score=38.96  Aligned_cols=38  Identities=21%  Similarity=0.358  Sum_probs=31.7

Q ss_pred             ccCCeEEEEcCCChhHHHHHHHHHHcCCceEEEEecCCC
Q 017760            9 IEGKTFLVTGGLGHVGSALCLELVRRGAYQVRAFDLRTN   47 (366)
Q Consensus         9 ~~~~~VlITGgtGfiG~~L~~~L~~~g~~~V~~~dr~~~   47 (366)
                      ...++|+|.|+ |-.|++++..|.+.|..+|++++|+..
T Consensus       125 ~~~k~vlIlGa-GGaaraia~aL~~~G~~~I~I~nR~~~  162 (284)
T PRK12549        125 ASLERVVQLGA-GGAGAAVAHALLTLGVERLTIFDVDPA  162 (284)
T ss_pred             ccCCEEEEECC-cHHHHHHHHHHHHcCCCEEEEECCCHH
Confidence            44578999966 559999999999999768999998754

---

Homologous Structure Templates

Structure Templates Detected by BLAST

Original result of BLAST against Protein Data Bank

No homologous structure with e-value below 0.005

Structure Templates Detected by RPS-BLAST

Original result of RPS-BLAST against PDB70 database

ID	Length	Definition	E-value
Query	366
2x4g_A	342	Nucleoside-diphosphate-sugar epimerase; isomerase;	9e-20
2x4g_A	342	Nucleoside-diphosphate-sugar epimerase; isomerase;	2e-06
2x6t_A	357	ADP-L-glycero-D-manno-heptose-6-epimerase; isomera	2e-07
2c5a_A	379	GDP-mannose-3', 5'-epimerase; short chain dehydrat	4e-06
3slg_A	372	PBGP3 protein; structural genomics, seattle struct	5e-06
2q1s_A	377	Putative nucleotide sugar epimerase/ dehydratase;	3e-05
3sxp_A	362	ADP-L-glycero-D-mannoheptose-6-epimerase; rossman	5e-05
2wm3_A	299	NMRA-like family domain containing protein 1; unkn	7e-05
3st7_A	369	Capsular polysaccharide synthesis enzyme CAP5F; ro	8e-05
3rft_A	267	Uronate dehydrogenase; apoenzyme, rossmann fold, N	1e-04
3ruf_A	351	WBGU; rossmann fold, UDP-hexose 4-epimerase, isome	2e-04
2hrz_A	342	AGR_C_4963P, nucleoside-diphosphate-sugar epimeras	2e-04
2bll_A	345	Protein YFBG; decarboxylase, short chain dehydroge	2e-04
1eq2_A	310	ADP-L-glycero-D-mannoheptose 6-epimerase; N-termin	2e-04
1z45_A	699	GAL10 bifunctional protein; epimerase, mutarotase,	2e-04
3dhn_A	227	NAD-dependent epimerase/dehydratase; reductase, PF	2e-04
3ay3_A	267	NAD-dependent epimerase/dehydratase; glucuronic ac	3e-04
3nzo_A	399	UDP-N-acetylglucosamine 4,6-dehydratase; structura	3e-04
2p5y_A	311	UDP-glucose 4-epimerase; TTHA0591, structural geno	3e-04
3vps_A	321	TUNA, NAD-dependent epimerase/dehydratase; tunicam	3e-04
2c20_A	330	UDP-glucose 4-epimerase; carbohydrate metabolism,	4e-04
3h2s_A	224	Putative NADH-flavin reductase; Q03B84, NESG, LCR1	6e-04
1i24_A	404	Sulfolipid biosynthesis protein SQD1; SDR, short-c	7e-04
1sb8_A	352	WBPP; epimerase, 4-epimerase, UDP-galnac, UDP-GLCN	8e-04

>2x4g_A Nucleoside-diphosphate-sugar epimerase; isomerase; 2.65A {Pseudomonas aeruginosa} Length = 342

 Score = 88.1 bits (219), Expect = 9e-20
 Identities = 25/187 (13%), Positives = 62/187 (33%), Gaps = 26/187 (13%)

Query: 75  TCAVRPAAIYGPGEERHLP-RIVSLAKLGLVPFKIGEPSVKTDWIYVDNLVLALILASMG 133
                P  + G  +      R+++    G +   +     + + I        L++A   
Sbjct: 176 VVIGIPGMVLGELDIGPTTGRVITAIGNGEMTHYVA---GQRNVIDAAEAGRGLLMA--- 229

Query: 134 LLDDIPGQKGRPIASGQPYFVSDGFPINTFEFIGPLLKTLDYDLPKSWLAVPHALFLGKV 193
                  ++GR    G+ Y ++ G  +   +    + + L    P+    +  A+     
Sbjct: 230 ------LERGRI---GERYLLT-GHNLEMADLTRRIAELLGQPAPQP---MSMAMA---- 272

Query: 194 FSFFYSVLYPWLNRWWLPQPLILPAEVYKVGVTHYFSLLKAKDELCYVPIVSPREGMAAT 253
                + L     R     PL+    +  +    +    KA++EL +    +  + +   
Sbjct: 273 --RALATLGRLRYRVSGQLPLLDETAIEVMAGGQFLDGRKAREELGFFSTTALDDTLLRA 330

Query: 254 ISYWQDR 260
           I +++D 
Sbjct: 331 IDWFRDN 337

>2x4g_A Nucleoside-diphosphate-sugar epimerase; isomerase; 2.65A {Pseudomonas aeruginosa} Length = 342

 Score = 47.7 bits (114), Expect = 2e-06
 Identities = 9/50 (18%), Positives = 14/50 (28%), Gaps = 3/50 (6%)

Query: 15 LVTGGLGHVGSALCLELVRRGAYQVRAFDLRTNSPWSHLLINHGVHCIQG 64
           V G  G +G      +   G + +     R +S     L      C   
Sbjct: 17 AVLGATGLLGHHAARAIRAAG-HDLVLIH-RPSSQIQR-LAYLEPECRVA 63

>2x6t_A ADP-L-glycero-D-manno-heptose-6-epimerase; isomerase, carbohydrate metabolism, stress response; HET: NAP ADP BMA; 2.36A {Escherichia coli} PDB: 2x86_A* Length = 357

 Score = 51.1 bits (123), Expect = 2e-07
 Identities = 16/54 (29%), Positives = 27/54 (50%), Gaps = 1/54 (1%)

Query: 1  MHLSENEGIEGKTFLVTGGLGHVGSALCLELVRRGAYQVRAFD-LRTNSPWSHL 53
          +      GIEG+  +VTGG G +GS +   L  +G   +   D L+  + + +L
Sbjct: 36 LGTGGGSGIEGRMIIVTGGAGFIGSNIVKALNDKGITDILVVDNLKDGTKFVNL 89

>2c5a_A GDP-mannose-3', 5'-epimerase; short chain dehydratase/reductase, GDP-gulose, GDP-galactose, keto intermediate, vitamin C, SDR; HET: GDC NAD BTB; 1.4A {Arabidopsis thaliana} SCOP: c.2.1.2 PDB: 2c59_A* 2c54_A* 2c5e_A* Length = 379

 Score = 47.3 bits (113), Expect = 4e-06
 Identities = 11/48 (22%), Positives = 18/48 (37%), Gaps = 1/48 (2%)

Query: 10 EGKTFLVTGGLGHVGSALCLELVRRGAYQVRAFDLRTNSPWSHLLINH 57
          E     +TG  G + S +   L   G + V A D + N   +  +   
Sbjct: 28 ENLKISITGAGGFIASHIARRLKHEG-HYVIASDWKKNEHMTEDMFCD 74

>3slg_A PBGP3 protein; structural genomics, seattle structural genomics center for infectious disease, ssgcid, melioidosis, glanders; 2.10A {Burkholderia pseudomallei} Length = 372

 Score = 47.1 bits (112), Expect = 5e-06
 Identities = 12/57 (21%), Positives = 27/57 (47%), Gaps = 1/57 (1%)

Query: 8  GIEGKTFLVTGGLGHVGSALCLELVRRGAYQVRAFDLRTNSPWSHLLINHGVHCIQG 64
           ++ K  L+ G  G +G  L   ++    ++V   D++T+     L+ +  +H  +G
Sbjct: 21 SMKAKKVLILGVNGFIGHHLSKRILETTDWEVFGMDMQTDRL-GDLVKHERMHFFEG 76

>2q1s_A Putative nucleotide sugar epimerase/ dehydratase; rossman fold, protein-NADH complex, sugar binding protein; HET: NAI; 1.50A {Bordetella bronchiseptica} PDB: 2pzj_A* 2q1t_A* 2q1u_A* Length = 377

 Score = 44.6 bits (106), Expect = 3e-05
 Identities = 13/35 (37%), Positives = 16/35 (45%)

Query: 9  IEGKTFLVTGGLGHVGSALCLELVRRGAYQVRAFD 43
          +     +V GG G VGS L   L+  G  QV   D
Sbjct: 30 LANTNVMVVGGAGFVGSNLVKRLLELGVNQVHVVD 64

>3sxp_A ADP-L-glycero-D-mannoheptose-6-epimerase; rossman fold, NAD binding, isomerase; HET: NAD; 2.55A {Helicobacter pylori} Length = 362

 Score = 43.8 bits (104), Expect = 5e-05
 Identities = 16/50 (32%), Positives = 26/50 (52%), Gaps = 2/50 (4%)

Query: 6  NEGIEGKTFLVTGGLGHVGSALCLELVRRGA-YQVRAFD-LRTNSPWSHL 53
          ++ +E +T L+TGG G VGS L           +V   D  R+N+ +S+ 
Sbjct: 5  DDELENQTILITGGAGFVGSNLAFHFQENHPKAKVVVLDKFRSNTLFSNN 54

>2wm3_A NMRA-like family domain containing protein 1; unknown function; HET: NAP NFL; 1.85A {Homo sapiens} PDB: 2wmd_A* 2exx_A* 3dxf_A 3e5m_A Length = 299

 Score = 43.1 bits (102), Expect = 7e-05
 Identities = 14/53 (26%), Positives = 22/53 (41%)

Query: 12 KTFLVTGGLGHVGSALCLELVRRGAYQVRAFDLRTNSPWSHLLINHGVHCIQG 64
          K  +V GG G  G ++   L+  G ++VR          +  L   G   +QG
Sbjct: 6  KLVVVFGGTGAQGGSVARTLLEDGTFKVRVVTRNPRKKAAKELRLQGAEVVQG 58

>3st7_A Capsular polysaccharide synthesis enzyme CAP5F; rossmann fold, cupid domain, short-chain dehydrogenase/reduc NADPH; 2.45A {Staphylococcus aureus} PDB: 2zkl_A 3vhr_A Length = 369

 Score = 43.0 bits (101), Expect = 8e-05
 Identities = 25/206 (12%), Positives = 50/206 (24%), Gaps = 70/206 (33%)

Query: 15  LVTGGLGHVGSALCLELVRRGAYQVRAFDLRTN------------------------SPW 50
           ++TG  G VG  L  +L     + +     +T                            
Sbjct: 4   VITGAKGFVGKNLKADLTSTTDHHIFEVHRQTKEEELESALLKADFIVHLAGVNRPEHDK 63

Query: 51  SHLLINHG--VHCIQGLRKNNRKCLYTCA------------------------------- 77
              L N     H +  L +N +K     +                               
Sbjct: 64  EFSLGNVSYLDHVLDILTRNTKKPAILLSSSIQATQDNPYGESKLQGEQLLREYAEEYGN 123

Query: 78  ----VRPAAIYGPGEE----RHLPRIVSLAKLGLVPFKIGEPSVKTDWIYVDNLVLALIL 129
                R   ++G   +      +              ++ + +V+    YVD++V  +  
Sbjct: 124 TVYIYRWPNLFGKWCKPNYNSVIATFCYKIARNE-EIQVNDRNVELTLNYVDDIVAEIKR 182

Query: 130 ASMGLLDDIPGQKGRPIASGQPYFVS 155
           A  G     P  +         + V+
Sbjct: 183 AIEGT----PTIENGVPTVPNVFKVT 204

>3rft_A Uronate dehydrogenase; apoenzyme, rossmann fold, NAD binding, oxidoreductase; 1.90A {Agrobacterium tumefaciens} PDB: 3rfv_A* 3rfx_A* Length = 267

 Score = 42.0 bits (99), Expect = 1e-04
 Identities = 14/53 (26%), Positives = 18/53 (33%), Gaps = 6/53 (11%)

Query: 12 KTFLVTGGLGHVGSALCLELVRRGAYQVRAFDLRTNSPWSHLLINHGVHCIQG 64
          K  LVTG  G +G  +   L       +R  DL    P           C+Q 
Sbjct: 4  KRLLVTGAAGQLGRVMRERLAPMA-EILRLADLSPLDPA-----GPNEECVQC 50

>3ruf_A WBGU; rossmann fold, UDP-hexose 4-epimerase, isomerase; HET: NAD UDP; 2.00A {Plesiomonas shigelloides} PDB: 3ru9_A* 3rud_A* 3rue_A* 3rua_A* 3ruh_A* 3ruc_A* 3ru7_A* 3lu1_A* Length = 351

 Score = 42.2 bits (100), Expect = 2e-04
 Identities = 12/42 (28%), Positives = 21/42 (50%), Gaps = 1/42 (2%)

Query: 2  HLSENEGIEGKTFLVTGGLGHVGSALCLELVRRGAYQVRAFD 43
           +++      KT+L+TG  G +GS L  +L++     V   D
Sbjct: 16 EITQQLIFSPKTWLITGVAGFIGSNLLEKLLKLN-QVVIGLD 56

>2hrz_A AGR_C_4963P, nucleoside-diphosphate-sugar epimerase; agrobacterium tumefa structural genomics, PSI-2, protein structure initiative; 1.85A {Agrobacterium tumefaciens} Length = 342

 Score = 42.0 bits (99), Expect = 2e-04
 Identities = 13/66 (19%), Positives = 21/66 (31%), Gaps = 8/66 (12%)

Query: 5  ENEGIEGKTFLVTGGLGHVGSALCLELVRRGAY------QVRAFDLRTNSPWSHLLINHG 58
          EN   +G    + G  G VG  L   LV+ G+       +    D+      +    +  
Sbjct: 8  ENLYFQGMHIAIIGAAGMVGRKLTQRLVKDGSLGGKPVEKFTLIDVFQPEAPAGF--SGA 65

Query: 59 VHCIQG 64
          V     
Sbjct: 66 VDARAA 71

>2bll_A Protein YFBG; decarboxylase, short chain dehydrogenase, L-ARA4N biosynthes methyltransferase, transferase; 2.3A {Escherichia coli} SCOP: c.2.1.2 PDB: 1u9j_A 1z73_A 1z75_A 1z7b_A 1z74_A Length = 345

 Score = 42.0 bits (99), Expect = 2e-04
 Identities = 14/51 (27%), Positives = 22/51 (43%), Gaps = 3/51 (5%)

Query: 15 LVTGGLGHVGSALCLELVRRGAYQVRAFD-LRTNSPWSHLLINHGVHCIQG 64
          L+ G  G +G+ L   L+R   Y+V   D        S  L +   H ++G
Sbjct: 4  LILGVNGFIGNHLTERLLREDHYEVYGLDIGSDAI--SRFLNHPHFHFVEG 52

>1eq2_A ADP-L-glycero-D-mannoheptose 6-epimerase; N-terminal domain rossmann fold, C-terminal mixed alpha/beta domain; HET: NAP ADQ; 2.00A {Escherichia coli} SCOP: c.2.1.2 Length = 310

 Score = 41.8 bits (99), Expect = 2e-04
 Identities = 12/40 (30%), Positives = 21/40 (52%), Gaps = 1/40 (2%)

Query: 15 LVTGGLGHVGSALCLELVRRGAYQVRAFD-LRTNSPWSHL 53
          +VTGG G +GS +   L  +G   +   D L+  + + +L
Sbjct: 3  IVTGGAGFIGSNIVKALNDKGITDILVVDNLKDGTKFVNL 42

>1z45_A GAL10 bifunctional protein; epimerase, mutarotase, metabolism, isomerase; HET: GAL NAD GUD; 1.85A {Saccharomyces cerevisiae} SCOP: b.30.5.4 c.2.1.2 Length = 699

 Score = 42.4 bits (100), Expect = 2e-04
 Identities = 17/48 (35%), Positives = 22/48 (45%), Gaps = 1/48 (2%)

Query: 1  MHLSENEGIEGKTFLVTGGLGHVGSALCLELVRRGAYQVRAFDLRTNS 48
          M          K  LVTGG G++GS   +EL+  G Y     D  +NS
Sbjct: 1  MTAQLQSESTSKIVLVTGGAGYIGSHTVVELIENG-YDCVVADNLSNS 47

>3dhn_A NAD-dependent epimerase/dehydratase; reductase, PF01370, Q89Z24_bactn, NESG, BTR310, structural genomics, PSI-2; 2.00A {Bacteroides thetaiotaomicron} Length = 227

 Score = 41.2 bits (97), Expect = 2e-04
 Identities = 13/31 (41%), Positives = 18/31 (58%), Gaps = 1/31 (3%)

Query: 12 KTFLVTGGLGHVGSALCLELVRRGAYQVRAF 42
          K  ++ G  G VGSAL  E + RG ++V A 
Sbjct: 5  KKIVLIGASGFVGSALLNEALNRG-FEVTAV 34

>3ay3_A NAD-dependent epimerase/dehydratase; glucuronic acid dehydrogeanse, oxidoreductase; 2.10A {Chromohalobacter salexigens} Length = 267

 Score = 41.1 bits (97), Expect = 3e-04
 Identities = 13/32 (40%), Positives = 16/32 (50%), Gaps = 1/32 (3%)

Query: 12 KTFLVTGGLGHVGSALCLELVRRGAYQVRAFD 43
             LVTG  G VGSA+   L     ++VR  D
Sbjct: 3  NRLLVTGAAGGVGSAIRPHLGTLA-HEVRLSD 33

>2p5y_A UDP-glucose 4-epimerase; TTHA0591, structural genomics, PSI; HET: NAD; 1.92A {Thermus thermophilus HB8} PDB: 2p5u_A* Length = 311

 Score = 41.0 bits (97), Expect = 3e-04
 Identities = 17/53 (32%), Positives = 25/53 (47%), Gaps = 5/53 (9%)

Query: 13 TFLVTGGLGHVGSALCLELVRRGAYQVRAFD-LRTNSPWSHLLINHGVHCIQG 64
            LVTGG G +GS +  +L+ RG  +V   D L T    +   +  GV   + 
Sbjct: 2  RVLVTGGAGFIGSHIVEDLLARG-LEVAVLDNLATGKREN---VPKGVPFFRV 50

>3vps_A TUNA, NAD-dependent epimerase/dehydratase; tunicamycins, biosynthesis, EXO-glycal, rossman transferase; HET: UD1 NAD; 1.90A {Streptomyces chartreusis} Length = 321

 Score = 41.0 bits (97), Expect = 3e-04
 Identities = 12/32 (37%), Positives = 15/32 (46%), Gaps = 1/32 (3%)

Query: 12 KTFLVTGGLGHVGSALCLELVRRGAYQVRAFD 43
             L+TGG G +G  L   LV  G  +V   D
Sbjct: 8  HRILITGGAGFIGGHLARALVASG-EEVTVLD 38

>2c20_A UDP-glucose 4-epimerase; carbohydrate metabolism, galactose metabolism, isomerase, NAD, spine; HET: NAD; 2.7A {Bacillus anthracis} Length = 330

 Score = 40.9 bits (97), Expect = 4e-04
 Identities = 16/54 (29%), Positives = 23/54 (42%), Gaps = 5/54 (9%)

Query: 12 KTFLVTGGLGHVGSALCLELVRRGAYQVRAFD-LRTNSPWSHLLINHGVHCIQG 64
           + L+ GG G++GS    +LV  G   V   D L+T    +   I  G     G
Sbjct: 2  NSILICGGAGYIGSHAVKKLVDEG-LSVVVVDNLQTGHEDA---ITEGAKFYNG 51

>3h2s_A Putative NADH-flavin reductase; Q03B84, NESG, LCR19, structural genomics, PSI-2, protein structure initiative; HET: NDP; 1.78A {Lactobacillus casei atcc 334} Length = 224

 Score = 40.0 bits (93), Expect = 6e-04
 Identities = 12/28 (42%), Positives = 15/28 (53%), Gaps = 1/28 (3%)

Query: 15 LVTGGLGHVGSALCLELVRRGAYQVRAF 42
           V G  G  GSA+  E  RRG ++V A 
Sbjct: 4  AVLGATGRAGSAIVAEARRRG-HEVLAV 30

>1i24_A Sulfolipid biosynthesis protein SQD1; SDR, short-chain dehydrogenase/reductase, rossmann fold, BIO protein; HET: NAD UPG; 1.20A {Arabidopsis thaliana} SCOP: c.2.1.2 PDB: 1i2c_A* 1i2b_A* 1qrr_A* Length = 404

 Score = 40.1 bits (94), Expect = 7e-04
 Identities = 13/40 (32%), Positives = 19/40 (47%), Gaps = 1/40 (2%)

Query: 4  SENEGIEGKTFLVTGGLGHVGSALCLELVRRGAYQVRAFD 43
          S +    G   +V GG G+ G A  L L ++  Y+V   D
Sbjct: 4  SHHHHHHGSRVMVIGGDGYCGWATALHLSKKN-YEVCIVD 42

>1sb8_A WBPP; epimerase, 4-epimerase, UDP-galnac, UDP-GLCNAC, SDR, G SYK, UDP, N-acetylglucosamine, N- acetylgalactosamine, UDP-GLC, isomerase; HET: NAD UD2; 2.10A {Pseudomonas aeruginosa} SCOP: c.2.1.2 PDB: 1sb9_A* Length = 352

 Score = 39.9 bits (94), Expect = 8e-04
 Identities = 12/41 (29%), Positives = 20/41 (48%), Gaps = 1/41 (2%)

Query: 3  LSENEGIEGKTFLVTGGLGHVGSALCLELVRRGAYQVRAFD 43
          L +    + K +L+TG  G +GS L   L++    +V   D
Sbjct: 19 LRKELPAQPKVWLITGVAGFIGSNLLETLLKLD-QKVVGLD 58

Structure Templates Detected by HHsearch

Original result of HHsearch against PDB70 database

ID	Length	Definition	Probability
Query	366
3ruf_A	351	WBGU; rossmann fold, UDP-hexose 4-epimerase, isome	99.96
4egb_A	346	DTDP-glucose 4,6-dehydratase; rhamnose pathway, ce	99.95
3m2p_A	311	UDP-N-acetylglucosamine 4-epimerase; SGXNY, 11155J	99.95
3slg_A	372	PBGP3 protein; structural genomics, seattle struct	99.95
2x4g_A	342	Nucleoside-diphosphate-sugar epimerase; isomerase;	99.95
4id9_A	347	Short-chain dehydrogenase/reductase; putative dehy	99.95
3enk_A	341	UDP-glucose 4-epimerase; seattle structural genomi	99.95
3ko8_A	312	NAD-dependent epimerase/dehydratase; isomerase, UD	99.94
3sxp_A	362	ADP-L-glycero-D-mannoheptose-6-epimerase; rossman	99.94
3ehe_A	313	UDP-glucose 4-epimerase (GALE-1); PSI-II, NYSGXRC,	99.94
3vps_A	321	TUNA, NAD-dependent epimerase/dehydratase; tunicam	99.94
4b4o_A	298	Epimerase family protein SDR39U1; isomerase; HET:	99.94
1sb8_A	352	WBPP; epimerase, 4-epimerase, UDP-galnac, UDP-GLCN	99.94
2b69_A	343	UDP-glucuronate decarboxylase 1; UDP-glucoronic ac	99.93
2hun_A	336	336AA long hypothetical DTDP-glucose 4,6-dehydrat;	99.93
2c20_A	330	UDP-glucose 4-epimerase; carbohydrate metabolism,	99.93
1rpn_A	335	GDP-mannose 4,6-dehydratase; short-chain dehydroge	99.93
2c5a_A	379	GDP-mannose-3', 5'-epimerase; short chain dehydrat	99.93
2bll_A	345	Protein YFBG; decarboxylase, short chain dehydroge	99.93
4b8w_A	319	GDP-L-fucose synthase; oxidoreductase; HET: NAP GD	99.93
2v6g_A	364	Progesterone 5-beta-reductase; tyrosine-dependent	99.93
2pk3_A	321	GDP-6-deoxy-D-LYXO-4-hexulose reductase; SDR, shor	99.93
2q1s_A	377	Putative nucleotide sugar epimerase/ dehydratase;	99.92
1rkx_A	357	CDP-glucose-4,6-dehydratase; SDR, lyase; HET: NAD;	99.92
2p5y_A	311	UDP-glucose 4-epimerase; TTHA0591, structural geno	99.92
1ek6_A	348	UDP-galactose 4-epimerase; short-chain dehydrogena	99.92
1oc2_A	348	DTDP-glucose 4,6-dehydratase; lyase, NADH, rhamnos	99.92
1r6d_A	337	TDP-glucose-4,6-dehydratase; rossmann fold, short-	99.92
3ius_A	286	Uncharacterized conserved protein; APC63810, silic	99.92
3gpi_A	286	NAD-dependent epimerase/dehydratase; structural ge	99.92
1e6u_A	321	GDP-fucose synthetase; epimerase/reductase, SDR, R	99.91
1i24_A	404	Sulfolipid biosynthesis protein SQD1; SDR, short-c	99.91
1orr_A	347	CDP-tyvelose-2-epimerase; rossmann fold, short-cha	99.91
3sc6_A	287	DTDP-4-dehydrorhamnose reductase; RFBD, structural	99.91
1udb_A	338	Epimerase, UDP-galactose-4-epimerase; isomerase; H	99.91
1t2a_A	375	GDP-mannose 4,6 dehydratase; structural genomics c	99.91
1db3_A	372	GDP-mannose 4,6-dehydratase; NADP, GDP-fucose, lya	99.9
2yy7_A	312	L-threonine dehydrogenase; thermolabIle, flavobact	99.9
1gy8_A	397	UDP-galactose 4-epimerase; oxidoreductase; HET: NA	99.9
2x6t_A	357	ADP-L-glycero-D-manno-heptose-6-epimerase; isomera	99.9
1eq2_A	310	ADP-L-glycero-D-mannoheptose 6-epimerase; N-termin	99.9
1n7h_A	381	GDP-D-mannose-4,6-dehydratase; rossmann fold, SDR,	99.9
2z1m_A	345	GDP-D-mannose dehydratase; short-chain dehydrogena	99.9
1z7e_A	660	Protein aRNA; rossmann fold, OB-like fold, hydrola	99.9
2pzm_A	330	Putative nucleotide sugar epimerase/ dehydratase;	99.89
2q1w_A	333	Putative nucleotide sugar epimerase/ dehydratase;	99.89
1z45_A	699	GAL10 bifunctional protein; epimerase, mutarotase,	99.89
1kew_A	361	RMLB;, DTDP-D-glucose 4,6-dehydratase; rossmann fo	99.89
1n2s_A	299	DTDP-4-, DTDP-glucose oxidoreductase; rossman-fold	99.88
3ajr_A	317	NDP-sugar epimerase; L-threonine dehydrogenase, L-	99.88
1vl0_A	292	DTDP-4-dehydrorhamnose reductase, RFBD ortholog; s	99.88
2ydy_A	315	Methionine adenosyltransferase 2 subunit beta; oxi	99.88
2hrz_A	342	AGR_C_4963P, nucleoside-diphosphate-sugar epimeras	99.86
3oh8_A	516	Nucleoside-diphosphate sugar epimerase (SULA FAMI;	99.86
2zcu_A	286	Uncharacterized oxidoreductase YTFG; alpha-beta sa	99.84
2rh8_A	338	Anthocyanidin reductase; flavonoids, rossmann fold	99.84
2jl1_A	287	Triphenylmethane reductase; oxidoreductase, biorem	99.84
1y1p_A	342	ARII, aldehyde reductase II; rossmann fold, short	99.83
2p4h_X	322	Vestitone reductase; NADPH-dependent reductase, is	99.82
2c29_D	337	Dihydroflavonol 4-reductase; flavonoids, short deh	99.82
4f6c_A	427	AUSA reductase domain protein; thioester reductase	99.8
3e48_A	289	Putative nucleoside-diphosphate-sugar epimerase; a	99.79
3i6i_A	346	Putative leucoanthocyanidin reductase 1; rossmann	99.78
4f6l_B	508	AUSA reductase domain protein; thioester reductase	99.78
2ggs_A	273	273AA long hypothetical DTDP-4-dehydrorhamnose red	99.76
3st7_A	369	Capsular polysaccharide synthesis enzyme CAP5F; ro	99.74
4dqv_A	478	Probable peptide synthetase NRP (peptide synthase;	99.72
2gn4_A	344	FLAA1 protein, UDP-GLCNAC C6 dehydratase; rossmann	99.7
3dhn_A	227	NAD-dependent epimerase/dehydratase; reductase, PF	99.7
2wm3_A	299	NMRA-like family domain containing protein 1; unkn	99.68
3nzo_A	399	UDP-N-acetylglucosamine 4,6-dehydratase; structura	99.67
1xgk_A	352	Nitrogen metabolite repression regulator NMRA; ros	99.65
2r6j_A	318	Eugenol synthase 1; phenylpropene, PIP reductase,	99.61
3e8x_A	236	Putative NAD-dependent epimerase/dehydratase; stru	99.59
3c1o_A	321	Eugenol synthase; phenylpropene, PIP reductase, sh	99.59
1qyd_A	313	Pinoresinol-lariciresinol reductase; NADPH-depende	99.58
1qyc_A	308	Phenylcoumaran benzylic ether reductase PT1; NADPH	99.58
3ew7_A	221	LMO0794 protein; Q8Y8U8_lismo, putative NAD-depend	99.56
2gas_A	307	Isoflavone reductase; NADPH-dependent reductase, o	99.56
3dqp_A	219	Oxidoreductase YLBE; alpha-beta protein., structur	99.55
3h2s_A	224	Putative NADH-flavin reductase; Q03B84, NESG, LCR1	99.51
3ay3_A	267	NAD-dependent epimerase/dehydratase; glucuronic ac	99.48
2a35_A	215	Hypothetical protein PA4017; alpha-beta-alpha sand	99.46
1xq6_A	253	Unknown protein; structural genomics, protein stru	99.44
3rft_A	267	Uronate dehydrogenase; apoenzyme, rossmann fold, N	99.42
3qvo_A	236	NMRA family protein; structural genomics, PSI-biol	99.37
1hdo_A	206	Biliverdin IX beta reductase; foetal metabolism, H	99.36
2bka_A	242	CC3, TAT-interacting protein TIP30; NADPH, PEG600,	99.29
2bgk_A	278	Rhizome secoisolariciresinol dehydrogenase; oxidor	99.19
1fmc_A	255	7 alpha-hydroxysteroid dehydrogenase; short-chain	99.16
3m1a_A	281	Putative dehydrogenase; short, PSI, MCSG, structur	99.12
3un1_A	260	Probable oxidoreductase; structural genomics, PSI-	99.06
1cyd_A	244	Carbonyl reductase; short-chain dehydrogenase, oxi	99.06
1w6u_A	302	2,4-dienoyl-COA reductase, mitochondrial precursor	99.03
3r6d_A	221	NAD-dependent epimerase/dehydratase; structural ge	99.01
4e6p_A	259	Probable sorbitol dehydrogenase (L-iditol 2-dehyd;	99.0
2pd6_A	264	Estradiol 17-beta-dehydrogenase 8; short-chain deh	98.96
2dkn_A	255	3-alpha-hydroxysteroid dehydrogenase; oxidoreducta	98.95
3d7l_A	202	LIN1944 protein; APC89317, structural genomics, PS	98.94
1uay_A	242	Type II 3-hydroxyacyl-COA dehydrogenase; beta oxid	98.93
3d3w_A	244	L-xylulose reductase; uronate cycle, short-chain d	98.92
2pnf_A	248	3-oxoacyl-[acyl-carrier-protein] reductase; short	98.91
1h5q_A	265	NADP-dependent mannitol dehydrogenase; oxidoreduct	98.91
2wsb_A	254	Galactitol dehydrogenase; oxidoreductase, SDR, ros	98.9
3lyl_A	247	3-oxoacyl-(acyl-carrier-protein) reductase; alpha	98.89
3awd_A	260	GOX2181, putative polyol dehydrogenase; oxidoreduc	98.89
3afn_B	258	Carbonyl reductase; alpha/beta/alpha, rossmann-fol	98.89
3svt_A	281	Short-chain type dehydrogenase/reductase; ssgcid,	98.88
3osu_A	246	3-oxoacyl-[acyl-carrier-protein] reductase; struct	98.88
3ai3_A	263	NADPH-sorbose reductase; rossmann-fold, NADPH-depe	98.88
3tpc_A	257	Short chain alcohol dehydrogenase-related dehydro;	98.87
2hq1_A	247	Glucose/ribitol dehydrogenase; CTH-1438, structura	98.85
1spx_A	278	Short-chain reductase family member (5L265); paral	98.85
3s55_A	281	Putative short-chain dehydrogenase/reductase; stru	98.84
3ak4_A	263	NADH-dependent quinuclidinone reductase; SDR, (R)-	98.84
1ja9_A	274	4HNR, 1,3,6,8-tetrahydroxynaphthalene reductase; p	98.84
3f9i_A	249	3-oxoacyl-[acyl-carrier-protein] reductase; 3-keto	98.84
3qiv_A	253	Short-chain dehydrogenase or 3-oxoacyl-[acyl-CARR	98.83
2c07_A	285	3-oxoacyl-(acyl-carrier protein) reductase; oxidor	98.83
3gem_A	260	Short chain dehydrogenase; structural genomics, AP	98.83
3v2h_A	281	D-beta-hydroxybutyrate dehydrogenase; structural g	98.82
2d1y_A	256	Hypothetical protein TT0321; strucrtural genomics,	98.8
3sx2_A	278	Putative 3-ketoacyl-(acyl-carrier-protein) reduct;	98.78
3tzq_B	271	Short-chain type dehydrogenase/reductase; ssgcid,	98.78
3gaf_A	256	7-alpha-hydroxysteroid dehydrogenase; seattle stru	98.78
2ph3_A	245	3-oxoacyl-[acyl carrier protein] reductase; TTHA04	98.77
2q2v_A	255	Beta-D-hydroxybutyrate dehydrogenase; SDR, oxidore	98.77
2cfc_A	250	2-(R)-hydroxypropyl-COM dehydrogenase; NAD, oxidor	98.77
1xq1_A	266	Putative tropinone reducatse; structural genomics,	98.76
3rih_A	293	Short chain dehydrogenase or reductase; structural	98.76
3i4f_A	264	3-oxoacyl-[acyl-carrier protein] reductase; struct	98.76
3pk0_A	262	Short-chain dehydrogenase/reductase SDR; ssgcid, s	98.75
1o5i_A	249	3-oxoacyl-(acyl carrier protein) reductase; TM1169	98.74
3n74_A	261	3-ketoacyl-(acyl-carrier-protein) reductase; seatt	98.73
1edo_A	244	Beta-keto acyl carrier protein reductase; nucleoti	98.72
3op4_A	248	3-oxoacyl-[acyl-carrier protein] reductase; 3-keto	98.72
1yxm_A	303	Pecra, peroxisomal trans 2-enoyl COA reductase; pe	98.71
3gk3_A	269	Acetoacetyl-COA reductase; acetoacetyl-CO reductas	98.71
3tl3_A	257	Short-chain type dehydrogenase/reductase; ssgcid,	98.7
3ppi_A	281	3-hydroxyacyl-COA dehydrogenase type-2; ssgcid, de	98.7
3grp_A	266	3-oxoacyl-(acyl carrierprotein) reductase; structu	98.7
3ijr_A	291	Oxidoreductase, short chain dehydrogenase/reducta;	98.69
3ezl_A	256	Acetoacetyl-COA reductase; ssgcid, acetyacetyl-COA	98.69
4da9_A	280	Short-chain dehydrogenase/reductase; structural ge	98.69
1gee_A	261	Glucose 1-dehydrogenase; short-chain dehydrogenase	98.69
3uxy_A	266	Short-chain dehydrogenase/reductase SDR; structura	98.69
1zk4_A	251	R-specific alcohol dehydrogenase; short chain redu	98.68
2ag5_A	246	DHRS6, dehydrogenase/reductase (SDR family) member	98.68
3imf_A	257	Short chain dehydrogenase; structural genomics, in	98.68
4eso_A	255	Putative oxidoreductase; NADP, structural genomics	98.68
3o38_A	266	Short chain dehydrogenase; tuberculosis, ortholog	98.68
2a4k_A	263	3-oxoacyl-[acyl carrier protein] reductase; reduct	98.68
2o23_A	265	HADH2 protein; HSD17B10, schad, ERAB, type II HADH	98.67
4dmm_A	269	3-oxoacyl-[acyl-carrier-protein] reductase; rossma	98.67
3ftp_A	270	3-oxoacyl-[acyl-carrier protein] reductase; ssgcid	98.67
2fwm_X	250	2,3-dihydro-2,3-dihydroxybenzoate dehydrogenase; e	98.67
4iin_A	271	3-ketoacyl-acyl carrier protein reductase (FABG);	98.66
2zat_A	260	Dehydrogenase/reductase SDR family member 4; alpha	98.66
3pgx_A	280	Carveol dehydrogenase; structural genomics, seattl	98.65
1yde_A	270	Retinal dehydrogenase/reductase 3; oxidoreductase,	98.65
2dtx_A	264	Glucose 1-dehydrogenase related protein; rossmann	98.65
2nm0_A	253	Probable 3-oxacyl-(acyl-carrier-protein) reductas;	98.65
1x1t_A	260	D(-)-3-hydroxybutyrate dehydrogenase; NAD, NADH, S	98.65
3ucx_A	264	Short chain dehydrogenase; ssgcid, seattle structu	98.64
2uvd_A	246	3-oxoacyl-(acyl-carrier-protein) reductase; beta-k	98.64
3uf0_A	273	Short-chain dehydrogenase/reductase SDR; gluconate	98.63
2z1n_A	260	Dehydrogenase; reductase, SDR, oxidoreductase; 1.8	98.63
2ae2_A	260	Protein (tropinone reductase-II); oxidoreductase,	98.62
4dqx_A	277	Probable oxidoreductase protein; structural genomi	98.62
4ibo_A	271	Gluconate dehydrogenase; enzyme function initiativ	98.61
1nff_A	260	Putative oxidoreductase RV2002; directed evolution	98.61
2gdz_A	267	NAD+-dependent 15-hydroxyprostaglandin dehydrogen;	98.61
4e3z_A	272	Putative oxidoreductase protein; PSI-biology, stru	98.6
3dii_A	247	Short-chain dehydrogenase/reductase SDR; SCOR, ros	98.6
4iiu_A	267	3-oxoacyl-[acyl-carrier protein] reductase; struct	98.6
2wyu_A	261	Enoyl-[acyl carrier protein] reductase; oxidoreduc	98.6
3vtz_A	269	Glucose 1-dehydrogenase; rossmann fold, oxidoreduc	98.59
1uls_A	245	Putative 3-oxoacyl-acyl carrier protein reductase;	98.59
2yut_A	207	Putative short-chain oxidoreductase; alpha and bet	98.59
3ksu_A	262	3-oxoacyl-acyl carrier protein reductase; structur	98.59
2rhc_B	277	Actinorhodin polyketide ketoreductase; oxidoreduct	98.58
1iy8_A	267	Levodione reductase; oxidoreductase; HET: NAD; 1.6	98.58
1uzm_A	247	3-oxoacyl-[acyl-carrier protein] reductase; beta-k	98.58
3sju_A	279	Keto reductase; short-chain dehydrogenase, oxidore	98.57
3oid_A	258	Enoyl-[acyl-carrier-protein] reductase [NADPH]; fa	98.57
2ew8_A	249	(S)-1-phenylethanol dehydrogenase; transferase; 2.	98.57
1ae1_A	273	Tropinone reductase-I; oxidoreductase, tropane alk	98.56
3r1i_A	276	Short-chain type dehydrogenase/reductase; structur	98.56
3qlj_A	322	Short chain dehydrogenase; structural genomics, se	98.56
3pxx_A	287	Carveol dehydrogenase; structural genomics, seattl	98.55
4egf_A	266	L-xylulose reductase; structural genomics, ssgcid,	98.54
3tox_A	280	Short chain dehydrogenase; structural genomics, PS	98.54
3uce_A	223	Dehydrogenase; rossmann fold, oxidoreductase; HET:	98.54
1hdc_A	254	3-alpha, 20 beta-hydroxysteroid dehydrogenase; oxi	98.54
1mxh_A	276	Pteridine reductase 2; SDR topology, protein-subst	98.54
3r3s_A	294	Oxidoreductase; structural genomics, csgid, center	98.54
3e9n_A	245	Putative short-chain dehydrogenase/reductase; stru	98.53
3u9l_A	324	3-oxoacyl-[acyl-carrier-protein] reductase; struct	98.53
3gvc_A	277	Oxidoreductase, probable short-chain type dehydrog	98.51
1vl8_A	267	Gluconate 5-dehydrogenase; TM0441, structural geno	98.5
3ctm_A	279	Carbonyl reductase; alcohol dehydrogenase, short-c	98.5
1hxh_A	253	3BETA/17BETA-hydroxysteroid dehydrogenase; alpha-b	98.5
3orf_A	251	Dihydropteridine reductase; alpha-beta-alpha sandw	98.5
4e4y_A	244	Short chain dehydrogenase family protein; structur	98.49
3edm_A	259	Short chain dehydrogenase; structural genomics, ox	98.49
3cxt_A	291	Dehydrogenase with different specificities; rossma	98.49
3oig_A	266	Enoyl-[acyl-carrier-protein] reductase [NADH]; fat	98.49
4fc7_A	277	Peroxisomal 2,4-dienoyl-COA reductase; SDR/rossman	98.49
3t4x_A	267	Oxidoreductase, short chain dehydrogenase/reducta;	98.49
3u5t_A	267	3-oxoacyl-[acyl-carrier-protein] reductase; struct	98.47
1sby_A	254	Alcohol dehydrogenase; ternary complex, NAD, trifl	98.46
2bd0_A	244	Sepiapterin reductase; oxidoreductase; HET: NAP BI	98.45
3rd5_A	291	Mypaa.01249.C; ssgcid, structural genomics, seattl	98.45
3v8b_A	283	Putative dehydrogenase, possibly 3-oxoacyl-[acyl-	98.44
3nrc_A	280	Enoyl-[acyl-carrier-protein] reductase (NADH); ros	98.44
2b4q_A	276	Rhamnolipids biosynthesis 3-oxoacyl-[acyl- carrier	98.43
3oec_A	317	Carveol dehydrogenase (mytha.01326.C, A0R518 HOMO;	98.43
3v2g_A	271	3-oxoacyl-[acyl-carrier-protein] reductase; struct	98.43
1xhl_A	297	Short-chain dehydrogenase/reductase family member	98.42
1qsg_A	265	Enoyl-[acyl-carrier-protein] reductase; enoyl redu	98.42
1geg_A	256	Acetoin reductase; SDR family, oxidoreductase; HET	98.41
3tjr_A	301	Short chain dehydrogenase; structural genomics, se	98.41
3ek2_A	271	Enoyl-(acyl-carrier-protein) reductase (NADH); ssg	98.41
3rwb_A	247	TPLDH, pyridoxal 4-dehydrogenase; short chain dehy	98.4
2ekp_A	239	2-deoxy-D-gluconate 3-dehydrogenase; structural ge	98.4
3uve_A	286	Carveol dehydrogenase ((+)-trans-carveol dehydrog;	98.38
3k31_A	296	Enoyl-(acyl-carrier-protein) reductase; ssgcid, NI	98.37
2ehd_A	234	Oxidoreductase, oxidoreductase, short-chain dehydr	98.37
3p19_A	266	BFPVVD8, putative blue fluorescent protein; rossma	98.36
3tsc_A	277	Putative oxidoreductase; structural genomics, seat	98.36
2p91_A	285	Enoyl-[acyl-carrier-protein] reductase [NADH]; NAD	98.36
3icc_A	255	Putative 3-oxoacyl-(acyl carrier protein) reducta;	98.35
1yb1_A	272	17-beta-hydroxysteroid dehydrogenase type XI; shor	98.34
3a28_C	258	L-2.3-butanediol dehydrogenase; chiral substrate r	98.33
3ioy_A	319	Short-chain dehydrogenase/reductase SDR; structura	98.33
3t7c_A	299	Carveol dehydrogenase; structural genomics, seattl	98.33
3f1l_A	252	Uncharacterized oxidoreductase YCIK; E. coli, NADP	98.33
3is3_A	270	17BETA-hydroxysteroid dehydrogenase; short chain d	98.33
1xkq_A	280	Short-chain reductase family member (5D234); parra	98.3
1g0o_A	283	Trihydroxynaphthalene reductase; protein-NADPH-act	98.29
4imr_A	275	3-oxoacyl-(acyl-carrier-protein) reductase; oxidor	98.28
3grk_A	293	Enoyl-(acyl-carrier-protein) reductase (NADH); ssg	98.28
2pd4_A	275	Enoyl-[acyl-carrier-protein] reductase [NADH]; ant	98.26
3lf2_A	265	Short chain oxidoreductase Q9HYA2; SDR, SCOR, ross	98.26
3l77_A	235	Short-chain alcohol dehydrogenase; oxidoreductase;	98.25
4dyv_A	272	Short-chain dehydrogenase/reductase SDR; structura	98.24
3h7a_A	252	Short chain dehydrogenase; oxidoreductase, PSI-2,	98.21
1zmt_A	254	Haloalcohol dehalogenase HHEC; halohydrin dehaloge	98.2
3ged_A	247	Short-chain dehydrogenase/reductase SDR; SCOR, ros	98.2
3l6e_A	235	Oxidoreductase, short-chain dehydrogenase/reducta;	98.19
3rkr_A	262	Short chain oxidoreductase; rossmann fold; HET: NA	98.19
3gdg_A	267	Probable NADP-dependent mannitol dehydrogenase; ro	98.16
3guy_A	230	Short-chain dehydrogenase/reductase SDR; structura	98.16
3rku_A	287	Oxidoreductase YMR226C; substrate fingerprint, sho	98.14
3tfo_A	264	Putative 3-oxoacyl-(acyl-carrier-protein) reducta;	98.12
3zv4_A	281	CIS-2,3-dihydrobiphenyl-2,3-DIOL dehydrogenase; ox	98.12
3kzv_A	254	Uncharacterized oxidoreductase YIR035C; cytoplasmi	98.11
3sc4_A	285	Short chain dehydrogenase (A0QTM2 homolog); ssgcid	98.1
4b79_A	242	PA4098, probable short-chain dehydrogenase; oxidor	98.0
4fs3_A	256	Enoyl-[acyl-carrier-protein] reductase [NADPH] FA;	97.96
3asu_A	248	Short-chain dehydrogenase/reductase SDR; SDR famil	97.96
2nwq_A	272	Probable short-chain dehydrogenase; oxidoreductase	97.94
1yo6_A	250	Putative carbonyl reductase sniffer; tyrosine-depe	97.88
4fgs_A	273	Probable dehydrogenase protein; PSI-biology, nysgr	97.85
3u0b_A	454	Oxidoreductase, short chain dehydrogenase/reducta	97.8
1sny_A	267	Sniffer CG10964-PA; alpha and beta protein, rossma	97.78
1xg5_A	279	ARPG836; short chain dehydrogenase, human, SGC, st	97.71
1wma_A	276	Carbonyl reductase [NADPH] 1; oxidoreductase; HET:	97.68
4gkb_A	258	3-oxoacyl-[acyl-carrier protein] reductase; putati	97.67
2fr1_A	486	Erythromycin synthase, eryai; short chain dehydrog	97.67
1ooe_A	236	Dihydropteridine reductase; structural genomics, P	97.66
1dhr_A	241	Dihydropteridine reductase; oxidoreductase(acting	97.65
3o26_A	311	Salutaridine reductase; short chain dehydrogenase/	97.6
1fjh_A	257	3alpha-hydroxysteroid dehydrogenase/carbonyl reduc	97.59
2jah_A	247	Clavulanic acid dehydrogenase; short-chain dehydro	97.57
4h15_A	261	Short chain alcohol dehydrogenase-related dehydro;	97.56
1zem_A	262	Xylitol dehydrogenase; rossmann fold, dinucleotide	97.53
3e03_A	274	Short chain dehydrogenase; structural genomics, PS	97.53
4fn4_A	254	Short chain dehydrogenase; NADH-binding, rossmann	97.52
2qq5_A	260	DHRS1, dehydrogenase/reductase SDR family member 1	97.51
4hp8_A	247	2-deoxy-D-gluconate 3-dehydrogenase; enzyme functi	97.5
3i1j_A	247	Oxidoreductase, short chain dehydrogenase/reducta;	97.49
3ic5_A	118	Putative saccharopine dehydrogenase; structural ge	97.49
4g81_D	255	Putative hexonate dehydrogenase; enzyme function i	97.49
3nyw_A	250	Putative oxidoreductase; fatty acid synthesis,3-ox	97.47
1xu9_A	286	Corticosteroid 11-beta-dehydrogenase, isozyme 1; h	97.46
1e7w_A	291	Pteridine reductase; dihydrofolate reductase, shor	97.43
2h7i_A	269	Enoyl-[acyl-carrier-protein] reductase [NADH]; oxi	97.43
3kvo_A	346	Hydroxysteroid dehydrogenase-like protein 2; HSDL2	97.4
2x9g_A	288	PTR1, pteridine reductase; short chain dehydrogena	97.32
1y7t_A	327	Malate dehydrogenase; NAD-dependent-MDH-NADPH comp	97.3
4dry_A	281	3-oxoacyl-[acyl-carrier-protein] reductase; struct	97.29
3llv_A	141	Exopolyphosphatase-related protein; NAD(P)-binding	97.28
1oaa_A	259	Sepiapterin reductase; tetrahydrobiopterin, oxidor	97.27
2qhx_A	328	Pteridine reductase 1; oxidoreductase, short-chain	97.26
1gz6_A	319	Estradiol 17 beta-dehydrogenase 4; 17BETA-HSD4, MF	97.02
1zmo_A	244	Halohydrin dehalogenase; haloalcohol dehalogenase,	96.95
2hmt_A	144	YUAA protein; RCK, KTN, KTR, KTRA, ktrab, membrane	96.92
2z5l_A	511	Tylkr1, tylactone synthase starter module and modu	96.87
1jtv_A	327	17 beta-hydroxysteroid dehydrogenase type 1; stero	96.86
1id1_A	153	Putative potassium channel protein; RCK domain, E.	96.79
2g1u_A	155	Hypothetical protein TM1088A; structural genomics,	96.78
1d7o_A	297	Enoyl-[acyl-carrier protein] reductase (NADH) PRE;	96.74
2gk4_A	232	Conserved hypothetical protein; alpha-beta-alpha s	96.73
3mje_A	496	AMPHB; rossmann fold, oxidoreductase; HET: NDP; 1.	96.54
1lss_A	140	TRK system potassium uptake protein TRKA homolog;	96.51
1u7z_A	226	Coenzyme A biosynthesis bifunctional protein coabc	96.49
2o2s_A	315	Enoyl-acyl carrier reductase; enoyl reductase, tri	96.43
2ptg_A	319	Enoyl-acyl carrier reductase; apicomplexa, enoyl (	96.42
1lu9_A	287	Methylene tetrahydromethanopterin dehydrogenase; a	96.39
1ff9_A	450	Saccharopine reductase; lysine biosynthesis, alpha	96.07
1smk_A	326	Malate dehydrogenase, glyoxysomal; tricarboxylic c	96.06
1b8p_A	329	Protein (malate dehydrogenase); oxidoreductase; 1.	96.06
3qp9_A	525	Type I polyketide synthase pikaii; rossmann fold,	96.04
1jay_A	212	Coenzyme F420H2:NADP+ oxidoreductase (FNO); rossma	95.91
3fwz_A	140	Inner membrane protein YBAL; TRKA-N domain, E.coli	95.9
3oml_A	613	GH14720P, peroxisomal multifunctional enzyme type	95.78
1hye_A	313	L-lactate/malate dehydrogenase; nucleotide binding	95.36
3lt0_A	329	Enoyl-ACP reductase; triclosan, triclosan variant,	95.29
2pff_A	1688	Fatty acid synthase subunit alpha, 3-oxoacyl-[acyl	95.28
3s8m_A	422	Enoyl-ACP reductase; rossmann fold, oxidoreductase	95.27
3c85_A	183	Putative glutathione-regulated potassium-efflux S	95.12
3fi9_A	343	Malate dehydrogenase; structural genomics, oxidore	95.07
3zu3_A	405	Putative reductase YPO4104/Y4119/YP_4011; oxidored	95.05
1pqw_A	198	Polyketide synthase; rossmann fold, dimer, structu	94.91
1o6z_A	303	MDH, malate dehydrogenase; halophilic, ION-binding	94.88
3c24_A	286	Putative oxidoreductase; YP_511008.1, structural g	94.88
2uv9_A	1878	Fatty acid synthase alpha subunits; fungal, dehydr	94.87
3l4b_C	218	TRKA K+ channel protien TM1088B; potassium channel	94.77
2raf_A	209	Putative dinucleotide-binding oxidoreductase; NP_7	94.73
2nqt_A	352	N-acetyl-gamma-glutamyl-phosphate reductase; apopr	94.64
4eue_A	418	Putative reductase CA_C0462; TER, biofuel, synthet	94.53
2pv7_A	298	T-protein [includes: chorismate mutase (EC 5.4.99	94.42
2uv8_A	1887	Fatty acid synthase subunit alpha (FAS2); fatty ac	94.33
3abi_A	365	Putative uncharacterized protein PH1688; L-lysine	94.3
1mld_A	314	Malate dehydrogenase; oxidoreductase(NAD(A)-CHOH(D	94.26
2et6_A	604	(3R)-hydroxyacyl-COA dehydrogenase; MFE-2, beta-ox	94.02
2et6_A	604	(3R)-hydroxyacyl-COA dehydrogenase; MFE-2, beta-ox	94.01
4huj_A	220	Uncharacterized protein; PSI-biology, nysgrc, stru	93.84
1xyg_A	359	Putative N-acetyl-gamma-glutamyl-phosphate reduct;	93.83
2ozp_A	345	N-acetyl-gamma-glutamyl-phosphate reductase; amino	93.72
3slk_A	795	Polyketide synthase extender module 2; rossmann fo	93.67
2vns_A	215	Metalloreductase steap3; metal-binding, transmembr	93.57
2aef_A	234	Calcium-gated potassium channel MTHK; rossmann fol	93.54
4e21_A	358	6-phosphogluconate dehydrogenase (decarboxylating;	93.35
1ys4_A	354	Aspartate-semialdehyde dehydrogenase; oxidoreducta	93.3
2axq_A	467	Saccharopine dehydrogenase; rossmann fold variant,	93.21
2ew2_A	316	2-dehydropantoate 2-reductase, putative; alpha-str	93.11
1v3u_A	333	Leukotriene B4 12- hydroxydehydrogenase/prostaglan	93.09
4ina_A	405	Saccharopine dehydrogenase; structural genomics, P	93.08
1bg6_A	359	N-(1-D-carboxylethyl)-L-norvaline dehydrogenase; L	93.07
1evy_A	366	Glycerol-3-phosphate dehydrogenase; rossmann fold,	93.04
2hcy_A	347	Alcohol dehydrogenase 1; tetramer of asymmetric di	92.82
2hjs_A	340	USG-1 protein homolog; aspartate-semialdehyde dehy	92.77
5mdh_A	333	Malate dehydrogenase; oxidoreductase, (NAD(A)-CHOH	92.74
4e12_A	283	Diketoreductase; oxidoreductase, NADH; HET: 1PE; 1	92.73
2r00_A	336	Aspartate-semialdehyde dehydrogenase; conformation	92.58
3qha_A	296	Putative oxidoreductase; seattle structural genomi	92.45
1wly_A	333	CAAR, 2-haloacrylate reductase; NADPH-dependent ox	92.29
2uyy_A	316	N-PAC protein; long-chain dehydrogenase, cytokine;	92.27
1qor_A	327	Quinone oxidoreductase; HET: NAP; 2.20A {Escherich	92.24
3tl2_A	315	Malate dehydrogenase; center for structural genomi	92.22
1f0y_A	302	HCDH, L-3-hydroxyacyl-COA dehydrogenase; abortive	92.21
3gvi_A	324	Malate dehydrogenase; NAD, oxidoreductase, tricarb	92.0
4f3y_A	272	DHPR, dihydrodipicolinate reductase; structural ge	91.99
3l9w_A	413	Glutathione-regulated potassium-efflux system Pro	91.88
1yb5_A	351	Quinone oxidoreductase; medium-chain dehydrogenase	91.82
4b7c_A	336	Probable oxidoreductase; NADP cofactor, rossmann f	91.77
2j3h_A	345	NADP-dependent oxidoreductase P1; double bond redu	91.74
2rcy_A	262	Pyrroline carboxylate reductase; malaria, structur	91.67
3qy9_A	243	DHPR, dihydrodipicolinate reductase; rossmann fold	91.65
3dtt_A	245	NADP oxidoreductase; structural genomics, joint ce	91.57
2j8z_A	354	Quinone oxidoreductase; medium-chain dehydrogenase	91.46
1pzg_A	331	LDH, lactate dehydrogenase; apicomplexa, APAD, tet	91.44
3d0o_A	317	L-LDH 1, L-lactate dehydrogenase 1; cytoplasm, gly	91.41
1ks9_A	291	KPA reductase;, 2-dehydropantoate 2-reductase; PAN	91.34
3doj_A	310	AT3G25530, dehydrogenase-like protein; gamma-hydro	91.32
1nyt_A	271	Shikimate 5-dehydrogenase; alpha/beta domains, WID	91.23
1t2d_A	322	LDH-P, L-lactate dehydrogenase; ternary complex, o	91.14
2eez_A	369	Alanine dehydrogenase; TTHA0216, structural genomi	91.14
2ewd_A	317	Lactate dehydrogenase,; protein-substrate_cofactor	90.95
2ep5_A	350	350AA long hypothetical aspartate-semialdehyde deh	90.95
1iz0_A	302	Quinone oxidoreductase; APO-enzyme, riken structur	90.9
3dr3_A	337	N-acetyl-gamma-glutamyl-phosphate reductase; csgid	90.89
2eih_A	343	Alcohol dehydrogenase; zinc ION binding protein, s	90.85
1lld_A	319	L-lactate dehydrogenase; oxidoreductase(CHOH (D)-N	90.71
3pdu_A	287	3-hydroxyisobutyrate dehydrogenase family protein;	90.6
3k96_A	356	Glycerol-3-phosphate dehydrogenase [NAD(P)+]; GPSA	90.54
1ur5_A	309	Malate dehydrogenase; oxidoreductase, tricarboxyli	90.41
4eye_A	342	Probable oxidoreductase; structural genomics, niai	90.41
4dup_A	353	Quinone oxidoreductase; PSI-biology, structural ge	90.31
3ggo_A	314	Prephenate dehydrogenase; TYRA, HPP, NADH, alpha-b	90.28
3hhp_A	312	Malate dehydrogenase; MDH, citric acid cycle, TCA	90.18
2vz8_A	2512	Fatty acid synthase; transferase, phosphopantethei	90.0
2c0c_A	362	Zinc binding alcohol dehydrogenase, domain contain	90.0
1y6j_A	318	L-lactate dehydrogenase; southeast collaboratory f	89.96
3qwb_A	334	Probable quinone oxidoreductase; rossmann fold, qu	89.86
2q3e_A	467	UDP-glucose 6-dehydrogenase; hexamer, structural g	89.83
3pwk_A	366	Aspartate-semialdehyde dehydrogenase; NADP binding	89.78
3gms_A	340	Putative NADPH:quinone reductase; structural genom	89.76
2zb4_A	357	Prostaglandin reductase 2; rossmann fold, alternat	89.74
3jyn_A	325	Quinone oxidoreductase; rossmann fold, protein-NAD	89.69
2hjr_A	328	Malate dehydrogenase; malaria, structural genomics	89.56
4g65_A	461	TRK system potassium uptake protein TRKA; structur	89.49
2izz_A	322	Pyrroline-5-carboxylate reductase 1; amino-acid bi	89.48
3cky_A	301	2-hydroxymethyl glutarate dehydrogenase; rossmann	89.47
3pqe_A	326	L-LDH, L-lactate dehydrogenase; FBP, oxidoreductas	89.45
3g79_A	478	NDP-N-acetyl-D-galactosaminuronic acid dehydrogen;	89.41
1hyh_A	309	L-hicdh, L-2-hydroxyisocaproate dehydrogenase; L-2	89.35
3l6d_A	306	Putative oxidoreductase; structural genomics, prot	89.33
4dpk_A	359	Malonyl-COA/succinyl-COA reductase; dinucleotide b	89.25
4dpl_A	359	Malonyl-COA/succinyl-COA reductase; dinucleotide b	89.25
1dih_A	273	Dihydrodipicolinate reductase; oxidoreductase; HET	89.23
2h78_A	302	Hibadh, 3-hydroxyisobutyrate dehydrogenase; APC601	89.13
1guz_A	310	Malate dehydrogenase; oxidoreductase, tricarboxyli	89.12
3hsk_A	381	Aspartate-semialdehyde dehydrogenase; candida albi	89.08
1mv8_A	436	GMD, GDP-mannose 6-dehydrogenase; rossman fold, do	89.03
2v6b_A	304	L-LDH, L-lactate dehydrogenase; oxidoreductase, ra	89.02
4aj2_A	331	L-lactate dehydrogenase A chain; oxidoreductase-in	89.0
3vtf_A	444	UDP-glucose 6-dehydrogenase; two discrete alpha/be	88.93
1lnq_A	336	MTHK channels, potassium channel related protein;	88.92
3ldh_A	330	Lactate dehydrogenase; oxidoreductase, CHOH donor,	88.88
3p7m_A	321	Malate dehydrogenase; putative dehydrogenase, enzy	88.83
3tnl_A	315	Shikimate dehydrogenase; structural genomics, cent	88.81
1ldn_A	316	L-lactate dehydrogenase; oxidoreductase(CHOH(D)-NA	88.77
3zen_D	3089	Fatty acid synthase; transferase, mycolic acid bio	88.72
3pid_A	432	UDP-glucose 6-dehydrogenase; rossmann fold, oxidor	88.71
3tri_A	280	Pyrroline-5-carboxylate reductase; amino acid bios	88.71
1jvb_A	347	NAD(H)-dependent alcohol dehydrogenase; archaeon,	88.67
3lk7_A	451	UDP-N-acetylmuramoylalanine--D-glutamate ligase; a	88.67
3jyo_A	283	Quinate/shikimate dehydrogenase; enzyme-cofactor c	88.67
3qsg_A	312	NAD-binding phosphogluconate dehydrogenase-like P;	88.65
3oj0_A	144	Glutr, glutamyl-tRNA reductase; structural genomic	88.56
3b1f_A	290	Putative prephenate dehydrogenase; enzyme, 4-hydro	88.56
1p77_A	272	Shikimate 5-dehydrogenase; NADPH, oxidoreductase;	88.5
2ahr_A	259	Putative pyrroline carboxylate reductase; pyrrolin	88.25
3ghy_A	335	Ketopantoate reductase protein; oxidoreductase, NA	88.19
2dpo_A	319	L-gulonate 3-dehydrogenase; structural genomics, N	88.13
2g5c_A	281	Prephenate dehydrogenase; TYRA, oxidoreductase; HE	88.05
3fbg_A	346	Putative arginate lyase; structural genomics, unkn	88.01
3gg2_A	450	Sugar dehydrogenase, UDP-glucose/GDP-mannose dehyd	88.0
3g0o_A	303	3-hydroxyisobutyrate dehydrogenase; NAD(P), valine	87.96
2f1k_A	279	Prephenate dehydrogenase; tyrosine synthesis, X-RA	87.89
1vpd_A	299	Tartronate semialdehyde reductase; structural geno	87.88
3eag_A	326	UDP-N-acetylmuramate:L-alanyl-gamma-D-glutamyl-ME	87.8
2vhw_A	377	Alanine dehydrogenase; NAD, secreted, oxidoreducta	87.72
1yb4_A	295	Tartronic semialdehyde reductase; structural genom	87.67
2cdc_A	366	Glucose dehydrogenase glucose 1-dehydrogenase, DHG	87.66
4ffl_A	363	PYLC; amino acid, biosynthesis of pyrrolysine, iso	87.59
3o8q_A	281	Shikimate 5-dehydrogenase I alpha; structural geno	87.57
3k5i_A	403	Phosphoribosyl-aminoimidazole carboxylase; purine	87.53
4dll_A	320	2-hydroxy-3-oxopropionate reductase; structural ge	87.27
4h7p_A	345	Malate dehydrogenase; ssgcid, structural G seattle	87.24
3pef_A	287	6-phosphogluconate dehydrogenase, NAD-binding; gam	87.14
1a5z_A	319	L-lactate dehydrogenase; oxidoreductase, glycolysi	87.1
1oju_A	294	MDH, malate dehydrogenase; hyperthermophilic, oxid	86.99
2cvz_A	289	Dehydrogenase, 3-hydroxyisobutyrate dehydrogenase;	86.9
3q2o_A	389	Phosphoribosylaminoimidazole carboxylase, ATPase;	86.89
2egg_A	297	AROE, shikimate 5-dehydrogenase; dimer, X-RAY diff	86.85
1vkn_A	351	N-acetyl-gamma-glutamyl-phosphate reductase; TM178	86.84
2o3j_A	481	UDP-glucose 6-dehydrogenase; structural genomics,	86.84
3p2o_A	285	Bifunctional protein fold; structural genomics, ce	86.72
1nvt_A	287	Shikimate 5'-dehydrogenase; structural genomics, P	86.21
4gbj_A	297	6-phosphogluconate dehydrogenase NAD-binding; stru	86.12
3hn7_A	524	UDP-N-acetylmuramate-L-alanine ligase; ATP-binding	86.09
3pwz_A	272	Shikimate dehydrogenase 3; alpha-beta, oxidoreduct	86.09
3i83_A	320	2-dehydropantoate 2-reductase; structural genomics	86.06
2gcg_A	330	Glyoxylate reductase/hydroxypyruvate reductase; NA	86.05
1txg_A	335	Glycerol-3-phosphate dehydrogenase [NAD(P)+]; oxid	86.02
4a26_A	300	Putative C-1-tetrahydrofolate synthase, cytoplasm;	85.98
4ezb_A	317	Uncharacterized conserved protein; structural geno	85.95
3dfu_A	232	Uncharacterized protein from 6-phosphogluconate de	85.85
3vku_A	326	L-LDH, L-lactate dehydrogenase; rossmann fold, NAD	85.81
3tz6_A	344	Aspartate-semialdehyde dehydrogenase; asadh, ASD,	85.81
3obb_A	300	Probable 3-hydroxyisobutyrate dehydrogenase; struc	85.81
3ond_A	488	Adenosylhomocysteinase; plant protein, enzyme-subs	85.78
2x0j_A	294	Malate dehydrogenase; oxidoreductase, hyperthermop	85.76
1tt7_A	330	YHFP; alcohol dehydrogenase, Zn-dependent, NAD, st	85.76
4ggo_A	401	Trans-2-enoyl-COA reductase; rossmann fold, oxidor	85.75
3ngx_A	276	Bifunctional protein fold; methylenetetrahydrofola	85.67
3mog_A	483	Probable 3-hydroxybutyryl-COA dehydrogenase; struc	85.66
1pjc_A	361	Protein (L-alanine dehydrogenase); oxidoreductase,	85.65
2y0c_A	478	BCEC, UDP-glucose dehydrogenase; oxidoreductase, c	85.57
3d1l_A	266	Putative NADP oxidoreductase BF3122; structural ge	85.49
4a0s_A	447	Octenoyl-COA reductase/carboxylase; oxidoreductase	85.47
3pi7_A	349	NADH oxidoreductase; groes-like fold, NAD(P)-bindi	85.43
3orq_A	377	N5-carboxyaminoimidazole ribonucleotide synthetas;	85.38
3t4e_A	312	Quinate/shikimate dehydrogenase; structural genomi	85.38
1xa0_A	328	Putative NADPH dependent oxidoreductases; structur	85.37
1dlj_A	402	UDP-glucose dehydrogenase; rossmann fold, ternary	85.19
3nep_X	314	Malate dehydrogenase; halophIle, molecular adpatat	85.15
3gt0_A	247	Pyrroline-5-carboxylate reductase; structural geno	85.14
1zud_1	251	Adenylyltransferase THIF; thiamin, thiazole, prote	85.02
2gf2_A	296	Hibadh, 3-hydroxyisobutyrate dehydrogenase; struct	84.91
4gwg_A	484	6-phosphogluconate dehydrogenase, decarboxylating;	84.78
2o7s_A	523	DHQ-SDH PR, bifunctional 3-dehydroquinate dehydrat	84.76
1leh_A	364	Leucine dehydrogenase; oxidoreductase; 2.20A {Lysi	84.72
1p9o_A	313	Phosphopantothenoylcysteine synthetase; ligase; 2.	84.59
1kjq_A	391	GART 2, phosphoribosylglycinamide formyltransferas	84.56
4a5o_A	286	Bifunctional protein fold; oxidoreductase, hydrola	84.48

>3ruf_A WBGU; rossmann fold, UDP-hexose 4-epimerase, isomerase; HET: NAD UDP; 2.00A {Plesiomonas shigelloides} SCOP: c.2.1.2 PDB: 3ru9_A* 3rud_A* 3rue_A* 3rua_A* 3ruh_A* 3ruc_A* 3ru7_A* 3lu1_A*

Probab=99.96  E-value=3.9e-29  Score=238.34  Aligned_cols=213  Identities=20%  Similarity=0.237  Sum_probs=164.8

Q ss_pred             cccCCeEEEEcCCChhHHHHHHHHHHcCCceEEEEecCCCCccc--ccccC-------CCeEEEEcc-------------
Q 017760            8 GIEGKTFLVTGGLGHVGSALCLELVRRGAYQVRAFDLRTNSPWS--HLLIN-------HGVHCIQGL-------------   65 (366)
Q Consensus         8 ~~~~~~VlITGgtGfiG~~L~~~L~~~g~~~V~~~dr~~~~~~~--~~~~~-------~~v~~i~gD-------------   65 (366)
                      .+++++|+|||||||+|++|++.|+++| ++|++++|+......  ..+..       .+++++++|             
T Consensus        22 ~~~~~~vlVtGatG~iG~~l~~~L~~~g-~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~~~~~Dl~d~~~~~~~~~~  100 (351)
T 3ruf_A           22 IFSPKTWLITGVAGFIGSNLLEKLLKLN-QVVIGLDNFSTGHQYNLDEVKTLVSTEQWSRFCFIEGDIRDLTTCEQVMKG  100 (351)
T ss_dssp             HHSCCEEEEETTTSHHHHHHHHHHHHTT-CEEEEEECCSSCCHHHHHHHHHTSCHHHHTTEEEEECCTTCHHHHHHHTTT
T ss_pred             CCCCCeEEEECCCcHHHHHHHHHHHHCC-CEEEEEeCCCCCchhhhhhhhhccccccCCceEEEEccCCCHHHHHHHhcC
Confidence            3557899999999999999999999999 599999997654321  11110       567788887             


Q ss_pred             ------------------------------------------------------------------------------c-
Q 017760           66 ------------------------------------------------------------------------------R-   66 (366)
Q Consensus        66 ------------------------------------------------------------------------------k-   66 (366)
                                                                                                    | 
T Consensus       101 ~d~Vih~A~~~~~~~~~~~~~~~~~~nv~~~~~ll~a~~~~~~~~~v~~SS~~vyg~~~~~~~~E~~~~~p~~~Y~~sK~  180 (351)
T 3ruf_A          101 VDHVLHQAALGSVPRSIVDPITTNATNITGFLNILHAAKNAQVQSFTYAASSSTYGDHPALPKVEENIGNPLSPYAVTKY  180 (351)
T ss_dssp             CSEEEECCCCCCHHHHHHCHHHHHHHHTHHHHHHHHHHHHTTCSEEEEEEEGGGGTTCCCSSBCTTCCCCCCSHHHHHHH
T ss_pred             CCEEEECCccCCcchhhhCHHHHHHHHHHHHHHHHHHHHHcCCCEEEEEecHHhcCCCCCCCCccCCCCCCCChhHHHHH
Confidence                                                                                          0 


Q ss_pred             --------cCCCCCceEEEEeCCccccCCCC------CCHHHHHHHHHcCCCCeeecCCCcceeceeHHHHHHHHHHHHh
Q 017760           67 --------KNNRKCLYTCAVRPAAIYGPGEE------RHLPRIVSLAKLGLVPFKIGEPSVKTDWIYVDNLVLALILASM  132 (366)
Q Consensus        67 --------s~~~~~l~~~ilRp~~iyGp~~~------~~l~~~i~~~~~g~~~~~~g~~~~~~~~v~vdDla~a~~~a~~  132 (366)
                              .....+++++++||+++|||++.      ..++.++..+.+|..+.++|++++.++|+|++|+|++++.+++
T Consensus       181 ~~E~~~~~~~~~~g~~~~ilRp~~v~G~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~g~~~~~~i~v~Dva~a~~~~~~  260 (351)
T 3ruf_A          181 VNEIYAQVYARTYGFKTIGLRYFNVFGRRQDPNGAYAAVIPKWTAAMLKGDDVYINGDGETSRDFCYIDNVIQMNILSAL  260 (351)
T ss_dssp             HHHHHHHHHHHHHCCCCEEEEECSEESTTCCCCSTTCCHHHHHHHHHHHTCCCEEESSSCCEECCEEHHHHHHHHHHHHT
T ss_pred             HHHHHHHHHHHHhCCCEEEEeeCceeCcCCCCCcchhhHHHHHHHHHHcCCCcEEeCCCCeEEeeEEHHHHHHHHHHHHh
Confidence                    01123788999999999999874      4578888889999888888999999999999999999999997


Q ss_pred             ccccCCCCCCCCCCCCCccEEecCCCCCCHHHHHHHHHHhcCCCCCccccCHHHHHHHHHHHHHHHHhhhhccccccCCC
Q 017760          133 GLLDDIPGQKGRPIASGQPYFVSDGFPINTFEFIGPLLKTLDYDLPKSWLAVPHALFLGKVFSFFYSVLYPWLNRWWLPQ  212 (366)
Q Consensus       133 ~l~~~~~~~~~~~~~~g~~y~I~~~~~vs~~e~~~~l~~~lg~~~~~~~lp~~~~~~~a~~~e~~~~~~~~~~~~~~~~~  212 (366)
                      .          .+...+++||+++++++|+.|+++.+.+.+|.+......+..                         ..
T Consensus       261 ~----------~~~~~~~~~ni~~~~~~s~~e~~~~i~~~~g~~~~~~~~~~~-------------------------~~  305 (351)
T 3ruf_A          261 A----------KDSAKDNIYNVAVGDRTTLNELSGYIYDELNLIHHIDKLSIK-------------------------YR  305 (351)
T ss_dssp             C----------CGGGCSEEEEESCSCCEEHHHHHHHHHHHHHTTCCC-----E-------------------------EE
T ss_pred             h----------ccccCCCEEEeCCCCcccHHHHHHHHHHHhCccccccccccc-------------------------cc
Confidence            2          245678999999999999999999999999985332211100                         00


Q ss_pred             CCCcHHhhhhhcccceecHHHHHHhcCCCCCCChHHHHHHHHHHHHhcc
Q 017760          213 PLILPAEVYKVGVTHYFSLLKAKDELCYVPIVSPREGMAATISYWQDRK  261 (366)
Q Consensus       213 p~l~~~ev~~~~~~~~~d~~ka~~~LG~~p~~~~~e~l~~~v~~~~~~~  261 (366)
                       ...+.+    ..+..+|++|++++|||+|+++++++|+++++||+++.
T Consensus       306 -~~~~~~----~~~~~~d~~k~~~~lG~~p~~~~~~~l~~~~~~~~~~~  349 (351)
T 3ruf_A          306 -EFRSGD----VRHSQADVTKAIDLLKYRPNIKIREGLRLSMPWYVRFL  349 (351)
T ss_dssp             -CCCTTC----CSBCCBCCHHHHHHHCCCCCCCHHHHHHHHHHHHHHHH
T ss_pred             -CCCCCc----cceeeeCHHHHHHHhCCCCCCCHHHHHHHHHHHHHHhh
Confidence             001111    12346899999999999999999999999999998764

>4egb_A DTDP-glucose 4,6-dehydratase; rhamnose pathway, center for structural genomics of infectio diseases, csgid, niaid; HET: NAD SUC; 3.00A {Bacillus anthracis}

Probab=99.95  E-value=7.2e-28  Score=229.16  Aligned_cols=208  Identities=19%  Similarity=0.224  Sum_probs=162.3

Q ss_pred             ccCCeEEEEcCCChhHHHHHHHHHHcCC-ceEEEEecCCCCccccccc----CCCeEEEEcc------------------
Q 017760            9 IEGKTFLVTGGLGHVGSALCLELVRRGA-YQVRAFDLRTNSPWSHLLI----NHGVHCIQGL------------------   65 (366)
Q Consensus         9 ~~~~~VlITGgtGfiG~~L~~~L~~~g~-~~V~~~dr~~~~~~~~~~~----~~~v~~i~gD------------------   65 (366)
                      +++|+|+|||||||+|++|++.|+++|. ++|+++++.........+.    .++++++++|                  
T Consensus        22 ~~~~~vlVtGatG~iG~~l~~~L~~~g~~~~v~~~~~~~~~~~~~~l~~~~~~~~~~~~~~Dl~d~~~~~~~~~~~~~d~  101 (346)
T 4egb_A           22 SNAMNILVTGGAGFIGSNFVHYMLQSYETYKIINFDALTYSGNLNNVKSIQDHPNYYFVKGEIQNGELLEHVIKERDVQV  101 (346)
T ss_dssp             --CEEEEEETTTSHHHHHHHHHHHHHCTTEEEEEEECCCTTCCGGGGTTTTTCTTEEEEECCTTCHHHHHHHHHHHTCCE
T ss_pred             cCCCeEEEECCccHHHHHHHHHHHhhCCCcEEEEEeccccccchhhhhhhccCCCeEEEEcCCCCHHHHHHHHhhcCCCE
Confidence            4568999999999999999999999982 3788888875333222221    2577888887                  


Q ss_pred             ------------------------------------------------------c---------------c---------
Q 017760           66 ------------------------------------------------------R---------------K---------   67 (366)
Q Consensus        66 ------------------------------------------------------k---------------s---------   67 (366)
                                                                            .               +         
T Consensus       102 Vih~A~~~~~~~~~~~~~~~~~~nv~~~~~ll~a~~~~~~~~~v~~SS~~vy~~~~~~~~~~E~~~~~p~~~Y~~sK~~~  181 (346)
T 4egb_A          102 IVNFAAESHVDRSIENPIPFYDTNVIGTVTLLELVKKYPHIKLVQVSTDEVYGSLGKTGRFTEETPLAPNSPYSSSKASA  181 (346)
T ss_dssp             EEECCCCC---------CHHHHHHTHHHHHHHHHHHHSTTSEEEEEEEGGGGCCCCSSCCBCTTSCCCCCSHHHHHHHHH
T ss_pred             EEECCcccchhhhhhCHHHHHHHHHHHHHHHHHHHHhcCCCEEEEeCchHHhCCCCcCCCcCCCCCCCCCChhHHHHHHH
Confidence                                                                  0               0         


Q ss_pred             -------CCCCCceEEEEeCCccccCCCC--CCHHHHHHHHHcCCCCeeecCCCcceeceeHHHHHHHHHHHHhccccCC
Q 017760           68 -------NNRKCLYTCAVRPAAIYGPGEE--RHLPRIVSLAKLGLVPFKIGEPSVKTDWIYVDNLVLALILASMGLLDDI  138 (366)
Q Consensus        68 -------~~~~~l~~~ilRp~~iyGp~~~--~~l~~~i~~~~~g~~~~~~g~~~~~~~~v~vdDla~a~~~a~~~l~~~~  138 (366)
                             ....+++++++||+.+|||++.  ..++.++..+..|..+.++|+++..++|+|++|+|++++.+++.     
T Consensus       182 E~~~~~~~~~~g~~~~ilRp~~v~G~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~v~Dva~a~~~~~~~-----  256 (346)
T 4egb_A          182 DMIALAYYKTYQLPVIVTRCSNNYGPYQYPEKLIPLMVTNALEGKKLPLYGDGLNVRDWLHVTDHCSAIDVVLHK-----  256 (346)
T ss_dssp             HHHHHHHHHHHCCCEEEEEECEEESTTCCTTSHHHHHHHHHHTTCCCEEETTSCCEECEEEHHHHHHHHHHHHHH-----
T ss_pred             HHHHHHHHHHhCCCEEEEeecceeCcCCCccchHHHHHHHHHcCCCceeeCCCCeEEeeEEHHHHHHHHHHHHhc-----
Confidence                   1123788999999999999873  56788899999999888889999999999999999999999973     


Q ss_pred             CCCCCCCCCCCccEEecCCCCCCHHHHHHHHHHhcCCCCCccccCHHHHHHHHHHHHHHHHhhhhccccccCCCCCCcHH
Q 017760          139 PGQKGRPIASGQPYFVSDGFPINTFEFIGPLLKTLDYDLPKSWLAVPHALFLGKVFSFFYSVLYPWLNRWWLPQPLILPA  218 (366)
Q Consensus       139 ~~~~~~~~~~g~~y~I~~~~~vs~~e~~~~l~~~lg~~~~~~~lp~~~~~~~a~~~e~~~~~~~~~~~~~~~~~p~l~~~  218 (366)
                            +. .|++||+++++++|+.|+++.+.+.+|.+.+.+...                           +...   .
T Consensus       257 ------~~-~g~~~~i~~~~~~s~~e~~~~i~~~~g~~~~~~~~~---------------------------~~~~---~  299 (346)
T 4egb_A          257 ------GR-VGEVYNIGGNNEKTNVEVVEQIITLLGKTKKDIEYV---------------------------TDRL---G  299 (346)
T ss_dssp             ------CC-TTCEEEECCSCCEEHHHHHHHHHHHHTCCGGGCEEE---------------------------CC-----C
T ss_pred             ------CC-CCCEEEECCCCceeHHHHHHHHHHHhCCCccccccc---------------------------CCCC---C
Confidence                  22 788999999999999999999999999875422110                           1100   0


Q ss_pred             hhhhhcccceecHHHHHHhcCCCCCCChHHHHHHHHHHHHhccc
Q 017760          219 EVYKVGVTHYFSLLKAKDELCYVPIVSPREGMAATISYWQDRKR  262 (366)
Q Consensus       219 ev~~~~~~~~~d~~ka~~~LG~~p~~~~~e~l~~~v~~~~~~~~  262 (366)
                          ......+|++|++++|||+|+++++++|+++++||+++..
T Consensus       300 ----~~~~~~~d~~k~~~~lG~~p~~~~~e~l~~~~~~~~~~~~  339 (346)
T 4egb_A          300 ----HDRRYAINAEKMKNEFDWEPKYTFEQGLQETVQWYEKNEE  339 (346)
T ss_dssp             ----CCSCCCBCCHHHHHHHCCCCCCCHHHHHHHHHHHHHHCHH
T ss_pred             ----CcceeeccHHHHHHHcCCCCCCCHHHHHHHHHHHHHhhhh
Confidence                0122358999999999999999999999999999988653

>3m2p_A UDP-N-acetylglucosamine 4-epimerase; SGXNY, 11155J, isomerase, structural genomics, PSI-2, protein structure initiative; HET: UDP; 2.95A {Bacillus cereus}

Probab=99.95  E-value=2.1e-27  Score=222.88  Aligned_cols=200  Identities=14%  Similarity=0.112  Sum_probs=157.3

Q ss_pred             CCeEEEEcCCChhHHHHHHHHHHcCCceEEEEecCCCCcccccccCCCeEEEEcc-------------------------
Q 017760           11 GKTFLVTGGLGHVGSALCLELVRRGAYQVRAFDLRTNSPWSHLLINHGVHCIQGL-------------------------   65 (366)
Q Consensus        11 ~~~VlITGgtGfiG~~L~~~L~~~g~~~V~~~dr~~~~~~~~~~~~~~v~~i~gD-------------------------   65 (366)
                      +|+|+|||||||+|++|++.|+++| ++|++++|++....   +  ++++++.+|                         
T Consensus         2 ~~~vlVtGatG~iG~~l~~~L~~~g-~~V~~~~r~~~~~~---~--~~~~~~~~Dl~~~~~~~~~~~~d~Vih~a~~~~~   75 (311)
T 3m2p_A            2 SLKIAVTGGTGFLGQYVVESIKNDG-NTPIILTRSIGNKA---I--NDYEYRVSDYTLEDLINQLNDVDAVVHLAATRGS   75 (311)
T ss_dssp             CCEEEEETTTSHHHHHHHHHHHHTT-CEEEEEESCCC----------CCEEEECCCCHHHHHHHTTTCSEEEECCCCCCS
T ss_pred             CCEEEEECCCcHHHHHHHHHHHhCC-CEEEEEeCCCCccc---C--CceEEEEccccHHHHHHhhcCCCEEEEccccCCC
Confidence            4799999999999999999999999 59999999833211   1  133333333                         


Q ss_pred             ----------------------------------------------------------------------ccCCCCCceE
Q 017760           66 ----------------------------------------------------------------------RKNNRKCLYT   75 (366)
Q Consensus        66 ----------------------------------------------------------------------ks~~~~~l~~   75 (366)
                                                                                            ......++++
T Consensus        76 ~~~~~~~~~n~~~~~~ll~a~~~~~~~r~v~~SS~~vyg~~~~~~~~E~~~~~p~~~Y~~sK~~~E~~~~~~~~~~g~~~  155 (311)
T 3m2p_A           76 QGKISEFHDNEILTQNLYDACYENNISNIVYASTISAYSDETSLPWNEKELPLPDLMYGVSKLACEHIGNIYSRKKGLCI  155 (311)
T ss_dssp             SSCGGGTHHHHHHHHHHHHHHHHTTCCEEEEEEEGGGCCCGGGCSBCTTSCCCCSSHHHHHHHHHHHHHHHHHHHSCCEE
T ss_pred             CChHHHHHHHHHHHHHHHHHHHHcCCCEEEEEccHHHhCCCCCCCCCCCCCCCCCchhHHHHHHHHHHHHHHHHHcCCCE
Confidence                                                                                  0012258899


Q ss_pred             EEEeCCccccCCCC--CCHHHHHHHHHcCCCCeeecCCCcceeceeHHHHHHHHHHHHhccccCCCCCCCCCCCCCccEE
Q 017760           76 CAVRPAAIYGPGEE--RHLPRIVSLAKLGLVPFKIGEPSVKTDWIYVDNLVLALILASMGLLDDIPGQKGRPIASGQPYF  153 (366)
Q Consensus        76 ~ilRp~~iyGp~~~--~~l~~~i~~~~~g~~~~~~g~~~~~~~~v~vdDla~a~~~a~~~l~~~~~~~~~~~~~~g~~y~  153 (366)
                      +++||+.+|||+..  ..++.++..+..|..+.++|++++.++|+|++|+|++++.+++           .+. .+++||
T Consensus       156 ~ilRp~~v~G~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~v~v~Dva~a~~~~~~-----------~~~-~~~~~~  223 (311)
T 3m2p_A          156 KNLRFAHLYGFNEKNNYMINRFFRQAFHGEQLTLHANSVAKREFLYAKDAAKSVIYALK-----------QEK-VSGTFN  223 (311)
T ss_dssp             EEEEECEEECSCC--CCHHHHHHHHHHTCCCEEESSBCCCCEEEEEHHHHHHHHHHHTT-----------CTT-CCEEEE
T ss_pred             EEEeeCceeCcCCCCCCHHHHHHHHHHcCCCeEEecCCCeEEceEEHHHHHHHHHHHHh-----------cCC-CCCeEE
Confidence            99999999999986  6788999999999988878999999999999999999999986           333 788999


Q ss_pred             ecCCCCCCHHHHHHHHHHhcCCCCCccccCHHHHHHHHHHHHHHHHhhhhccccccCCCCCCcHHhhhhhcccceecHHH
Q 017760          154 VSDGFPINTFEFIGPLLKTLDYDLPKSWLAVPHALFLGKVFSFFYSVLYPWLNRWWLPQPLILPAEVYKVGVTHYFSLLK  233 (366)
Q Consensus       154 I~~~~~vs~~e~~~~l~~~lg~~~~~~~lp~~~~~~~a~~~e~~~~~~~~~~~~~~~~~p~l~~~ev~~~~~~~~~d~~k  233 (366)
                      +++++++|+.|+++.+.+.+|.+.+....|.+                           .       .....+..+|++|
T Consensus       224 i~~~~~~s~~e~~~~i~~~~g~~~~~~~~~~~---------------------------~-------~~~~~~~~~d~~k  269 (311)
T 3m2p_A          224 IGSGDALTNYEVANTINNAFGNKDNLLVKNPN---------------------------A-------NEGIHSSYMDSSK  269 (311)
T ss_dssp             ECCSCEECHHHHHHHHHHHTTCTTCEEECSSS---------------------------B-------CCSCCCBCBCCHH
T ss_pred             eCCCCcccHHHHHHHHHHHhCCCCcceecCCC---------------------------C-------CCCcCceecCHHH
Confidence            99999999999999999999987665433210                           0       0111234689999


Q ss_pred             HHHhcCCCCCCChHHHHHHHHHHHHhccc
Q 017760          234 AKDELCYVPIVSPREGMAATISYWQDRKR  262 (366)
Q Consensus       234 a~~~LG~~p~~~~~e~l~~~v~~~~~~~~  262 (366)
                      ++++|||+|+++++++|+++++|+++++.
T Consensus       270 ~~~~lG~~p~~~~~~~l~~~~~~~~~~~~  298 (311)
T 3m2p_A          270 AKELLDFSTDYNFATAVEEIHLLMRGLDD  298 (311)
T ss_dssp             HHHHSCCCCSCCHHHHHHHHHHHHCC---
T ss_pred             HHHHhCCCcccCHHHHHHHHHHHHHhccc
Confidence            99999999999999999999999987654

>3slg_A PBGP3 protein; structural genomics, seattle structural genomics center for infectious disease, ssgcid, melioidosis, glanders; 2.10A {Burkholderia pseudomallei}

Probab=99.95  E-value=1.4e-27  Score=229.53  Aligned_cols=221  Identities=17%  Similarity=0.185  Sum_probs=162.9

Q ss_pred             cccCCeEEEEcCCChhHHHHHHHHHHc-CCceEEEEecCCCCcccccccCCCeEEEEcc---------------------
Q 017760            8 GIEGKTFLVTGGLGHVGSALCLELVRR-GAYQVRAFDLRTNSPWSHLLINHGVHCIQGL---------------------   65 (366)
Q Consensus         8 ~~~~~~VlITGgtGfiG~~L~~~L~~~-g~~~V~~~dr~~~~~~~~~~~~~~v~~i~gD---------------------   65 (366)
                      .|+||+|+|||||||+|++|++.|+++ | ++|++++|++.... .....++++++++|                     
T Consensus        21 ~m~~~~vlVtGatG~iG~~l~~~L~~~~g-~~V~~~~r~~~~~~-~~~~~~~v~~~~~Dl~~d~~~~~~~~~~~d~Vih~   98 (372)
T 3slg_A           21 SMKAKKVLILGVNGFIGHHLSKRILETTD-WEVFGMDMQTDRLG-DLVKHERMHFFEGDITINKEWVEYHVKKCDVILPL   98 (372)
T ss_dssp             --CCCEEEEESCSSHHHHHHHHHHHHHSS-CEEEEEESCCTTTG-GGGGSTTEEEEECCTTTCHHHHHHHHHHCSEEEEC
T ss_pred             ccCCCEEEEECCCChHHHHHHHHHHhCCC-CEEEEEeCChhhhh-hhccCCCeEEEeCccCCCHHHHHHHhccCCEEEEc
Confidence            356789999999999999999999998 8 59999999865422 11223567777776                     


Q ss_pred             ------------------------------------------------c-------------------c-----------
Q 017760           66 ------------------------------------------------R-------------------K-----------   67 (366)
Q Consensus        66 ------------------------------------------------k-------------------s-----------   67 (366)
                                                                      .                   .           
T Consensus        99 A~~~~~~~~~~~~~~~~~~nv~~~~~ll~a~~~~~~~~v~~SS~~vyg~~~~~~~~e~~~~~~~~p~~~p~~~Y~~sK~~  178 (372)
T 3slg_A           99 VAIATPATYVKQPLRVFELDFEANLPIVRSAVKYGKHLVFPSTSEVYGMCADEQFDPDASALTYGPINKPRWIYACSKQL  178 (372)
T ss_dssp             BCCCCHHHHHHCHHHHHHHHTTTTHHHHHHHHHHTCEEEEECCGGGGBSCCCSSBCTTTCCEEECCTTCTTHHHHHHHHH
T ss_pred             CccccHHHHhhCHHHHHHHHHHHHHHHHHHHHHhCCcEEEeCcHHHhCCCCCCCCCccccccccCCCCCCCCcHHHHHHH
Confidence                                                            0                   0           


Q ss_pred             --------CCCCCceEEEEeCCccccCCCCC----------CHHHHHHHHHcCCCCeeecCCCcceeceeHHHHHHHHHH
Q 017760           68 --------NNRKCLYTCAVRPAAIYGPGEER----------HLPRIVSLAKLGLVPFKIGEPSVKTDWIYVDNLVLALIL  129 (366)
Q Consensus        68 --------~~~~~l~~~ilRp~~iyGp~~~~----------~l~~~i~~~~~g~~~~~~g~~~~~~~~v~vdDla~a~~~  129 (366)
                              ... +++++++||+++|||++..          .++.++..+.+|..+.+++++++.++|+|++|+|++++.
T Consensus       179 ~E~~~~~~~~~-g~~~~ilRp~~v~G~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~i~v~Dva~a~~~  257 (372)
T 3slg_A          179 MDRVIWGYGME-GLNFTLFRPFNWIGPGLDSIYTPKEGSSRVVTQFLGHIVRGENISLVDGGSQKRAFTYVDDGISALMK  257 (372)
T ss_dssp             HHHHHHHHHTT-TCEEEEEEECSEECSSCCCTTCSBSCSCHHHHHHHHHHHHTCCEEEGGGGCCEEECEEHHHHHHHHHH
T ss_pred             HHHHHHHHHHC-CCCEEEEccccccCCCcccccccccccchHHHHHHHHHHcCCCcEEeCCCceEEEEEEHHHHHHHHHH
Confidence                    111 7899999999999998643          577888888899888888999999999999999999999


Q ss_pred             HHhccccCCCCCCCCCC--CCCccEEecC-CCCCCHHHHHHHHHHhcCCCCCccccCHHHHHHHHHHHHHHHHhhhhccc
Q 017760          130 ASMGLLDDIPGQKGRPI--ASGQPYFVSD-GFPINTFEFIGPLLKTLDYDLPKSWLAVPHALFLGKVFSFFYSVLYPWLN  206 (366)
Q Consensus       130 a~~~l~~~~~~~~~~~~--~~g~~y~I~~-~~~vs~~e~~~~l~~~lg~~~~~~~lp~~~~~~~a~~~e~~~~~~~~~~~  206 (366)
                      +++           .+.  ..+++||+++ ++++|+.|+++.+.+.+|.+.+....|....                +..
T Consensus       258 ~~~-----------~~~~~~~~~~~ni~~~~~~~s~~e~~~~i~~~~g~~~~~~~~~~~~~----------------~~~  310 (372)
T 3slg_A          258 IIE-----------NSNGVATGKIYNIGNPNNNFSVRELANKMLELAAEFPEYADSAKRVK----------------LVE  310 (372)
T ss_dssp             HHH-----------CGGGTTTTEEEEECCTTCEEEHHHHHHHHHHHHHHCTTTHHHHHTCC----------------EEE
T ss_pred             HHh-----------cccCcCCCceEEeCCCCCCccHHHHHHHHHHHhCCCcccccccccce----------------eee
Confidence            997           333  5789999999 4899999999999999997755432221000                000


Q ss_pred             cccCCCCCCcHHhhhhhcccceecHHHHHHhcCCCCCCChHHHHHHHHHHHHhccc
Q 017760          207 RWWLPQPLILPAEVYKVGVTHYFSLLKAKDELCYVPIVSPREGMAATISYWQDRKR  262 (366)
Q Consensus       207 ~~~~~~p~l~~~ev~~~~~~~~~d~~ka~~~LG~~p~~~~~e~l~~~v~~~~~~~~  262 (366)
                      .  ........  .........+|++|++++|||+|+++++++|+++++||+++..
T Consensus       311 ~--~~~~~~~~--~~~~~~~~~~d~~k~~~~lG~~p~~~l~e~l~~~~~~~~~~~~  362 (372)
T 3slg_A          311 T--TSGAYYGN--GYQDVQNRVPKIENTMQELGWAPQFTFDDALRQIFEAYRGHVA  362 (372)
T ss_dssp             C-----------------CCCCBCCHHHHHHHTCCCCCCHHHHHHHHHHHHTTCHH
T ss_pred             c--cccccccC--CccccceeecCHHHHHHHcCCCCCCCHHHHHHHHHHHHHHHHH
Confidence            0  00000000  0011123468999999999999999999999999999987654

>2x4g_A Nucleoside-diphosphate-sugar epimerase; isomerase; 2.65A {Pseudomonas aeruginosa}

Probab=99.95  E-value=5.5e-27  Score=222.42  Aligned_cols=223  Identities=14%  Similarity=0.168  Sum_probs=167.2

Q ss_pred             cCCeEEEEcCCChhHHHHHHHHHHcCCceEEEEecCCCCcccccccCCCeEEEEcc------------------------
Q 017760           10 EGKTFLVTGGLGHVGSALCLELVRRGAYQVRAFDLRTNSPWSHLLINHGVHCIQGL------------------------   65 (366)
Q Consensus        10 ~~~~VlITGgtGfiG~~L~~~L~~~g~~~V~~~dr~~~~~~~~~~~~~~v~~i~gD------------------------   65 (366)
                      .+|+|+||||+||+|+++++.|+++| ++|++++|++...  ..+...+++++.+|                        
T Consensus        12 ~~M~ilVtGatG~iG~~l~~~L~~~g-~~V~~~~r~~~~~--~~l~~~~~~~~~~Dl~d~~~~~~~~~~~d~vih~a~~~   88 (342)
T 2x4g_A           12 AHVKYAVLGATGLLGHHAARAIRAAG-HDLVLIHRPSSQI--QRLAYLEPECRVAEMLDHAGLERALRGLDGVIFSAGYY   88 (342)
T ss_dssp             CCCEEEEESTTSHHHHHHHHHHHHTT-CEEEEEECTTSCG--GGGGGGCCEEEECCTTCHHHHHHHTTTCSEEEEC----
T ss_pred             cCCEEEEECCCcHHHHHHHHHHHHCC-CEEEEEecChHhh--hhhccCCeEEEEecCCCHHHHHHHHcCCCEEEECCccC
Confidence            44699999999999999999999999 5999999986542  12222356677777                        


Q ss_pred             ----------------------------------------------c----------------c----------------
Q 017760           66 ----------------------------------------------R----------------K----------------   67 (366)
Q Consensus        66 ----------------------------------------------k----------------s----------------   67 (366)
                                                                    .                .                
T Consensus        89 ~~~~~~~~~~~~~n~~~~~~l~~a~~~~~~~~~v~~SS~~~~~~~~~~~~~~E~~~~~p~~~~~~~Y~~sK~~~e~~~~~  168 (342)
T 2x4g_A           89 PSRPRRWQEEVASALGQTNPFYAACLQARVPRILYVGSAYAMPRHPQGLPGHEGLFYDSLPSGKSSYVLCKWALDEQARE  168 (342)
T ss_dssp             --------CHHHHHHHHHHHHHHHHHHHTCSCEEEECCGGGSCCCTTSSCBCTTCCCSSCCTTSCHHHHHHHHHHHHHHH
T ss_pred             cCCCCCHHHHHHHHHHHHHHHHHHHHHcCCCeEEEECCHHhhCcCCCCCCCCCCCCCCccccccChHHHHHHHHHHHHHH
Confidence                                                          1                1                


Q ss_pred             -CCCCCceEEEEeCCccccCCC-CCCHHHHHHHHHcCCCCeeecCCCcceeceeHHHHHHHHHHHHhccccCCCCCCCCC
Q 017760           68 -NNRKCLYTCAVRPAAIYGPGE-ERHLPRIVSLAKLGLVPFKIGEPSVKTDWIYVDNLVLALILASMGLLDDIPGQKGRP  145 (366)
Q Consensus        68 -~~~~~l~~~ilRp~~iyGp~~-~~~l~~~i~~~~~g~~~~~~g~~~~~~~~v~vdDla~a~~~a~~~l~~~~~~~~~~~  145 (366)
                       ... +++++++||+.+|||+. ...++.++..+.+|....+   ++..++++|++|+|++++.+++.           +
T Consensus       169 ~~~~-g~~~~ilrp~~v~g~~~~~~~~~~~~~~~~~~~~~~~---~~~~~~~i~v~Dva~~~~~~~~~-----------~  233 (342)
T 2x4g_A          169 QARN-GLPVVIGIPGMVLGELDIGPTTGRVITAIGNGEMTHY---VAGQRNVIDAAEAGRGLLMALER-----------G  233 (342)
T ss_dssp             HHHT-TCCEEEEEECEEECSCCSSCSTTHHHHHHHTTCCCEE---ECCEEEEEEHHHHHHHHHHHHHH-----------S
T ss_pred             Hhhc-CCcEEEEeCCceECCCCccccHHHHHHHHHcCCCccc---cCCCcceeeHHHHHHHHHHHHhC-----------C
Confidence             001 68899999999999987 4116777888888876544   45789999999999999999973           2


Q ss_pred             CCCCccEEecCCCCCCHHHHHHHHHHhcCCCCCccccCHHHHHHHHHHHHHHHHhhhhccccccCCCCCCcHHhhhhhcc
Q 017760          146 IASGQPYFVSDGFPINTFEFIGPLLKTLDYDLPKSWLAVPHALFLGKVFSFFYSVLYPWLNRWWLPQPLILPAEVYKVGV  225 (366)
Q Consensus       146 ~~~g~~y~I~~~~~vs~~e~~~~l~~~lg~~~~~~~lp~~~~~~~a~~~e~~~~~~~~~~~~~~~~~p~l~~~ev~~~~~  225 (366)
                      .. |++||+++++ +|+.|+++.+.+.+|.+.+. .+|.+.....+.+.+.+....+        ..|.+++..+.....
T Consensus       234 ~~-g~~~~v~~~~-~s~~e~~~~i~~~~g~~~~~-~~p~~~~~~~~~~~~~~~~~~~--------~~~~~~~~~~~~~~~  302 (342)
T 2x4g_A          234 RI-GERYLLTGHN-LEMADLTRRIAELLGQPAPQ-PMSMAMARALATLGRLRYRVSG--------QLPLLDETAIEVMAG  302 (342)
T ss_dssp             CT-TCEEEECCEE-EEHHHHHHHHHHHHTCCCCE-EECHHHHHHHHHHHHC------------------------CCTTC
T ss_pred             CC-CceEEEcCCc-ccHHHHHHHHHHHhCCCCCC-cCCHHHHHHHHHHHHHHHHhhC--------CCCCCCHHHHHHHhc
Confidence            23 8899999999 99999999999999998877 8999888877776666554332        234444443433445


Q ss_pred             cceecHHHHHHhcCC-CCCCChHHHHHHHHHHHHhccc
Q 017760          226 THYFSLLKAKDELCY-VPIVSPREGMAATISYWQDRKR  262 (366)
Q Consensus       226 ~~~~d~~ka~~~LG~-~p~~~~~e~l~~~v~~~~~~~~  262 (366)
                      +..+|++|++++||| +| ++++++++++++||++++.
T Consensus       303 ~~~~d~~k~~~~lG~~~p-~~~~~~l~~~~~~~~~~g~  339 (342)
T 2x4g_A          303 GQFLDGRKAREELGFFST-TALDDTLLRAIDWFRDNGY  339 (342)
T ss_dssp             CCCBCCHHHHHHHCCCCC-SCHHHHHHHHHHHHHHTTC
T ss_pred             CcccChHHHHHhCCCCCC-CCHHHHHHHHHHHHHHcCC
Confidence            567899999999999 99 8999999999999988753

>4id9_A Short-chain dehydrogenase/reductase; putative dehydrogenase, enzyme function initiative, EFI, STR genomics, oxidoreductase; HET: NAD; 1.60A {Agrobacterium fabrum} PDB: 4idg_A*

Probab=99.95  E-value=1.4e-27  Score=227.14  Aligned_cols=199  Identities=17%  Similarity=0.215  Sum_probs=157.5

Q ss_pred             cccCCeEEEEcCCChhHHHHHHHHHHcCCceEEEEecCCCCcccccccCCCeEEEEcc----------------------
Q 017760            8 GIEGKTFLVTGGLGHVGSALCLELVRRGAYQVRAFDLRTNSPWSHLLINHGVHCIQGL----------------------   65 (366)
Q Consensus         8 ~~~~~~VlITGgtGfiG~~L~~~L~~~g~~~V~~~dr~~~~~~~~~~~~~~v~~i~gD----------------------   65 (366)
                      ..++|+||||||+||+|++|++.|+++| ++|++++|++..        .+++++.+|                      
T Consensus        16 ~~~~~~vlVtGatG~iG~~l~~~L~~~G-~~V~~~~r~~~~--------~~~~~~~~Dl~d~~~~~~~~~~~d~vih~A~   86 (347)
T 4id9_A           16 PRGSHMILVTGSAGRVGRAVVAALRTQG-RTVRGFDLRPSG--------TGGEEVVGSLEDGQALSDAIMGVSAVLHLGA   86 (347)
T ss_dssp             -----CEEEETTTSHHHHHHHHHHHHTT-CCEEEEESSCCS--------SCCSEEESCTTCHHHHHHHHTTCSEEEECCC
T ss_pred             ccCCCEEEEECCCChHHHHHHHHHHhCC-CEEEEEeCCCCC--------CCccEEecCcCCHHHHHHHHhCCCEEEECCc
Confidence            3457899999999999999999999999 599999998653        223333333                      


Q ss_pred             ---------------------------------------------c---------------------------------c
Q 017760           66 ---------------------------------------------R---------------------------------K   67 (366)
Q Consensus        66 ---------------------------------------------k---------------------------------s   67 (366)
                                                                   .                                 .
T Consensus        87 ~~~~~~~~~~~~~~~nv~~~~~ll~a~~~~~~~~~V~~SS~~vyg~~~~~~~~~~E~~~~~~~~~Y~~sK~~~E~~~~~~  166 (347)
T 4id9_A           87 FMSWAPADRDRMFAVNVEGTRRLLDAASAAGVRRFVFASSGEVYPENRPEFLPVTEDHPLCPNSPYGLTKLLGEELVRFH  166 (347)
T ss_dssp             CCCSSGGGHHHHHHHHTHHHHHHHHHHHHTTCSEEEEEEEGGGTTTTSCSSSSBCTTSCCCCCSHHHHHHHHHHHHHHHH
T ss_pred             ccCcchhhHHHHHHHHHHHHHHHHHHHHHcCCCeEEEECCHHHhCCCCCCCCCcCCCCCCCCCChHHHHHHHHHHHHHHH
Confidence                                                         0                                 0


Q ss_pred             CCCCCceEEEEeCCccc-------------cCCC-------------CCCHHHHHHHHHcCCCCeeecCCCcceec----
Q 017760           68 NNRKCLYTCAVRPAAIY-------------GPGE-------------ERHLPRIVSLAKLGLVPFKIGEPSVKTDW----  117 (366)
Q Consensus        68 ~~~~~l~~~ilRp~~iy-------------Gp~~-------------~~~l~~~i~~~~~g~~~~~~g~~~~~~~~----  117 (366)
                      ....+++++++||+.+|             ||+.             ...++.++..+..|..+.++|+++..++|    
T Consensus       167 ~~~~~~~~~ilRp~~v~~~~~~~~~~~~~~Gp~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~  246 (347)
T 4id9_A          167 QRSGAMETVILRFSHTQDATELLDEDSFFSGPRFFLRPRIHQQQNFGNAAIAELLQSRDIGEPSHILARNENGRPFRMHI  246 (347)
T ss_dssp             HHHSSSEEEEEEECEEECGGGTTCTTSSSHHHHHBHHHHHHHHHHHTCHHHHHHHHHHCCSSCCEEEEECTTCCBCEECE
T ss_pred             HHhcCCceEEEccceEeecccccccccccCCCCcccccccccccccchhHHHHHHHHHHcCCCeEEeCCCCcccCCccCc
Confidence            12347899999999999             8873             45677788888889888888999999999    


Q ss_pred             eeHHHHHHHHHHHHhccccCCCCCCCCCCCCCccEEecCCCCCCHHHHHHHHHHhcCCCCCccccCHHHHHHHHHHHHHH
Q 017760          118 IYVDNLVLALILASMGLLDDIPGQKGRPIASGQPYFVSDGFPINTFEFIGPLLKTLDYDLPKSWLAVPHALFLGKVFSFF  197 (366)
Q Consensus       118 v~vdDla~a~~~a~~~l~~~~~~~~~~~~~~g~~y~I~~~~~vs~~e~~~~l~~~lg~~~~~~~lp~~~~~~~a~~~e~~  197 (366)
                      +|++|+|++++.+++           .+...+++||+++++++|+.|+++.+.+.+|.+.+...+|              
T Consensus       247 i~v~Dva~ai~~~~~-----------~~~~~~~~~ni~~~~~~s~~e~~~~i~~~~g~~~~~~~~p--------------  301 (347)
T 4id9_A          247 TDTRDMVAGILLALD-----------HPEAAGGTFNLGADEPADFAALLPKIAALTGLPIVTVDFP--------------  301 (347)
T ss_dssp             EEHHHHHHHHHHHHH-----------CGGGTTEEEEESCSSCEEHHHHHHHHHHHHCCCEEEEECS--------------
T ss_pred             EeHHHHHHHHHHHhc-----------CcccCCCeEEECCCCcccHHHHHHHHHHHhCCCCceeeCC--------------
Confidence            999999999999997           4445688999999999999999999999999876544332              


Q ss_pred             HHhhhhccccccCCCCCCcHHhhhhhcccceecHHHHHHhcCCCCCCChHHHHHHHHHHHHhccccC
Q 017760          198 YSVLYPWLNRWWLPQPLILPAEVYKVGVTHYFSLLKAKDELCYVPIVSPREGMAATISYWQDRKRKS  264 (366)
Q Consensus       198 ~~~~~~~~~~~~~~~p~l~~~ev~~~~~~~~~d~~ka~~~LG~~p~~~~~e~l~~~v~~~~~~~~~~  264 (366)
                                   ..+.           ...+|++|++++|||+|+++++++|+++++||+++..++
T Consensus       302 -------------~~~~-----------~~~~d~~k~~~~lG~~p~~~~~~~l~~~~~~~~~~~~~~  344 (347)
T 4id9_A          302 -------------GDGV-----------YYHTSNERIRNTLGFEAEWTMDRMLEEAATARRQRLAKE  344 (347)
T ss_dssp             -------------SCCC-----------BCCBCCHHHHHHHCCCCCCCHHHHHHHHHHHHHHHCC--
T ss_pred             -------------Cccc-----------ccccCHHHHHHHhCCCCCCCHHHHHHHHHHHHHhhhhcc
Confidence                         1111           346899999999999999999999999999998866543

>3enk_A UDP-glucose 4-epimerase; seattle structural genomics center for infectious disease, ssgcid, isomerase, NAD; HET: NAD GUD; 1.90A {Burkholderia pseudomallei 1710B} SCOP: c.2.1.0

Probab=99.95  E-value=5.2e-27  Score=222.64  Aligned_cols=209  Identities=19%  Similarity=0.172  Sum_probs=155.3

Q ss_pred             ccCCeEEEEcCCChhHHHHHHHHHHcCCceEEEEecCCCCcccc--c---ccCCCeEEEEcc------------------
Q 017760            9 IEGKTFLVTGGLGHVGSALCLELVRRGAYQVRAFDLRTNSPWSH--L---LINHGVHCIQGL------------------   65 (366)
Q Consensus         9 ~~~~~VlITGgtGfiG~~L~~~L~~~g~~~V~~~dr~~~~~~~~--~---~~~~~v~~i~gD------------------   65 (366)
                      +++|+|+||||+||||+++++.|+++| ++|++++|+.......  .   ....+++++++|                  
T Consensus         3 ~~~~~vlVTGatG~iG~~l~~~L~~~G-~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~Dl~d~~~~~~~~~~~~~d~   81 (341)
T 3enk_A            3 STKGTILVTGGAGYIGSHTAVELLAHG-YDVVIADNLVNSKREAIARIEKITGKTPAFHETDVSDERALARIFDAHPITA   81 (341)
T ss_dssp             CSSCEEEEETTTSHHHHHHHHHHHHTT-CEEEEECCCSSSCTHHHHHHHHHHSCCCEEECCCTTCHHHHHHHHHHSCCCE
T ss_pred             CCCcEEEEecCCcHHHHHHHHHHHHCC-CcEEEEecCCcchHHHHHHHHhhcCCCceEEEeecCCHHHHHHHHhccCCcE
Confidence            356799999999999999999999999 5999999876543210  0   012456666666                  


Q ss_pred             ---------------------------------------------------------------------------cc---
Q 017760           66 ---------------------------------------------------------------------------RK---   67 (366)
Q Consensus        66 ---------------------------------------------------------------------------ks---   67 (366)
                                                                                                 |.   
T Consensus        82 vih~A~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~~~iv~~SS~~~~g~~~~~~~~e~~~~~~~~~Y~~sK~~~e  161 (341)
T 3enk_A           82 AIHFAALKAVGESVAKPIEYYRNNLDSLLSLLRVMRERAVKRIVFSSSATVYGVPERSPIDETFPLSATNPYGQTKLMAE  161 (341)
T ss_dssp             EEECCCCCCHHHHHHCHHHHHHHHHHHHHHHHHHHHHTTCCEEEEEEEGGGBCSCSSSSBCTTSCCBCSSHHHHHHHHHH
T ss_pred             EEECccccccCccccChHHHHHHHHHHHHHHHHHHHhCCCCEEEEEecceEecCCCCCCCCCCCCCCCCChhHHHHHHHH
Confidence                                                                                       00   


Q ss_pred             -------CCCCCceEEEEeCCccccCCC------------CCCHHHHHHHHHcC-CCCeeec------CCCcceeceeHH
Q 017760           68 -------NNRKCLYTCAVRPAAIYGPGE------------ERHLPRIVSLAKLG-LVPFKIG------EPSVKTDWIYVD  121 (366)
Q Consensus        68 -------~~~~~l~~~ilRp~~iyGp~~------------~~~l~~~i~~~~~g-~~~~~~g------~~~~~~~~v~vd  121 (366)
                             ....+++++++||+++|||+.            ...++.+....... ..+.++|      ++++.++|+|++
T Consensus       162 ~~~~~~~~~~~~~~~~~lRp~~v~G~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~g~~~~~~i~v~  241 (341)
T 3enk_A          162 QILRDVEAADPSWRVATLRYFNPVGAHESGLIGEDPAGIPNNLMPYVAQVAVGKLEKLRVFGSDYPTPDGTGVRDYIHVV  241 (341)
T ss_dssp             HHHHHHHHHCTTCEEEEEEECEEECCCTTSSCCCCCSSSCSSHHHHHHHHHHTSSSCEEEECSCSSSTTSSCEECEEEHH
T ss_pred             HHHHHHhhcCCCceEEEEeeccccCCccccccCCCcccCccchHHHHHHHHhcCCCceEEeCCccCCCCCCeeEeeEEHH
Confidence                   112358999999999999964            23344444444332 3445566      788999999999


Q ss_pred             HHHHHHHHHHhccccCCCCCCCCCCCCCccEEecCCCCCCHHHHHHHHHHhcCCCCCccccCHHHHHHHHHHHHHHHHhh
Q 017760          122 NLVLALILASMGLLDDIPGQKGRPIASGQPYFVSDGFPINTFEFIGPLLKTLDYDLPKSWLAVPHALFLGKVFSFFYSVL  201 (366)
Q Consensus       122 Dla~a~~~a~~~l~~~~~~~~~~~~~~g~~y~I~~~~~vs~~e~~~~l~~~lg~~~~~~~lp~~~~~~~a~~~e~~~~~~  201 (366)
                      |+|++++.+++...         +...+++||+++++++|+.|+++.+.+.+|.+.+....|                  
T Consensus       242 Dva~a~~~~~~~~~---------~~~~~~~~ni~~~~~~s~~e~~~~i~~~~g~~~~~~~~~------------------  294 (341)
T 3enk_A          242 DLARGHIAALDALE---------RRDASLTVNLGTGRGYSVLEVVRAFEKASGRAVPYELVA------------------  294 (341)
T ss_dssp             HHHHHHHHHHHHHH---------HHTSCEEEEESCSCCEEHHHHHHHHHHHHCSCCCEEEEC------------------
T ss_pred             HHHHHHHHHHHhhh---------cCCcceEEEeCCCCceeHHHHHHHHHHHhCCCcceeeCC------------------
Confidence            99999999997311         235688999999999999999999999999876654332                  


Q ss_pred             hhccccccCCCCCCcHHhhhhhcccceecHHHHHHhcCCCCCCChHHHHHHHHHHHHhccc
Q 017760          202 YPWLNRWWLPQPLILPAEVYKVGVTHYFSLLKAKDELCYVPIVSPREGMAATISYWQDRKR  262 (366)
Q Consensus       202 ~~~~~~~~~~~p~l~~~ev~~~~~~~~~d~~ka~~~LG~~p~~~~~e~l~~~v~~~~~~~~  262 (366)
                                .+   +.+    .....+|++|++++|||+|+++++++|+++++||+++..
T Consensus       295 ----------~~---~~~----~~~~~~d~~k~~~~lG~~p~~~l~~~l~~~~~~~~~~~~  338 (341)
T 3enk_A          295 ----------RR---PGD----VAECYANPAAAAETIGWKAERDLERMCADHWRWQENNPR  338 (341)
T ss_dssp             ----------CC---TTC----CSEECBCCHHHHHHHCCCCCCCHHHHHHHHHHHHHHSTT
T ss_pred             ----------CC---CCC----ccccccCHHHHHHHcCCCCCCCHHHHHHHHHHHHHhcCc
Confidence                      11   001    113368999999999999999999999999999988754

>3ko8_A NAD-dependent epimerase/dehydratase; isomerase, UDP-galactose 4-epimerase; HET: NAD; 1.80A {Pyrobaculum calidifontis} SCOP: c.2.1.0 PDB: 3icp_A* 3aw9_A*

Probab=99.94  E-value=4.5e-27  Score=220.33  Aligned_cols=154  Identities=14%  Similarity=0.073  Sum_probs=114.5

Q ss_pred             CCceEEEEeCCccccCCCC-CCHHHHHHHHHcC-CCCeeecCCCcceeceeHHHHHHHHHHHHhccccCCCCCCCCCCCC
Q 017760           71 KCLYTCAVRPAAIYGPGEE-RHLPRIVSLAKLG-LVPFKIGEPSVKTDWIYVDNLVLALILASMGLLDDIPGQKGRPIAS  148 (366)
Q Consensus        71 ~~l~~~ilRp~~iyGp~~~-~~l~~~i~~~~~g-~~~~~~g~~~~~~~~v~vdDla~a~~~a~~~l~~~~~~~~~~~~~~  148 (366)
                      .+++++++||+++|||+.. ..++.++..+..+ ..+..++++++.++|+|++|+|++++.++++..+        +...
T Consensus       155 ~g~~~~~lrp~~v~g~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~i~v~Dva~a~~~~~~~~~~--------~~~~  226 (312)
T 3ko8_A          155 FGVRCLAVRYANVVGPRLRHGVIYDFIMKLRRNPNVLEVLGDGTQRKSYLYVRDAVEATLAAWKKFEE--------MDAP  226 (312)
T ss_dssp             HCCEEEEEEECEEECTTCCSSHHHHHHHHHHHCTTEEEEC----CEECEEEHHHHHHHHHHHHHHHHH--------SCCS
T ss_pred             hCCCEEEEeeccccCcCCCCChHHHHHHHHHhCCCCeEEcCCCCeEEeeEEHHHHHHHHHHHHHhccc--------cCCC
Confidence            3789999999999999865 4566777777666 4455788999999999999999999999973111        3456


Q ss_pred             CccEEecCCCCCCHHHHHHHHHHhcCCCCCccccCHHHHHHHHHHHHHHHHhhhhccccccCCCCCCcHHhhhhhcccce
Q 017760          149 GQPYFVSDGFPINTFEFIGPLLKTLDYDLPKSWLAVPHALFLGKVFSFFYSVLYPWLNRWWLPQPLILPAEVYKVGVTHY  228 (366)
Q Consensus       149 g~~y~I~~~~~vs~~e~~~~l~~~lg~~~~~~~lp~~~~~~~a~~~e~~~~~~~~~~~~~~~~~p~l~~~ev~~~~~~~~  228 (366)
                      +++||+++++++|+.|+++.+.+.+|.+.+...+|....                         ....+.+    .....
T Consensus       227 ~~~~ni~~~~~~s~~e~~~~i~~~~g~~~~~~~~~~~~~-------------------------~~~~~~~----~~~~~  277 (312)
T 3ko8_A          227 FLALNVGNVDAVRVLDIAQIVAEVLGLRPEIRLVPSTPD-------------------------GRGWPGD----VKYMT  277 (312)
T ss_dssp             EEEEEESCSSCEEHHHHHHHHHHHHTCCCEEEEC-----------------------------------CC----CSEEC
T ss_pred             CcEEEEcCCCceeHHHHHHHHHHHhCCCCceeecCcccc-------------------------ccCCCCC----ccccc
Confidence            789999999999999999999999998866554443210                         0000000    11236


Q ss_pred             ecHHHHHHhcCCCCCCChHHHHHHHHHHHHhcc
Q 017760          229 FSLLKAKDELCYVPIVSPREGMAATISYWQDRK  261 (366)
Q Consensus       229 ~d~~ka~~~LG~~p~~~~~e~l~~~v~~~~~~~  261 (366)
                      +|++|++++|||+|+++++++|+++++|+++++
T Consensus       278 ~d~~k~~~~lG~~p~~~~~~~l~~~~~~~~~~~  310 (312)
T 3ko8_A          278 LAVTKLMKLTGWRPTMTSAEAVKKTAEDLAKEL  310 (312)
T ss_dssp             BCCHHHHHHHCCCCSSCHHHHHHHHHHHHHHHH
T ss_pred             cCHHHHHHHhCCCCCCCHHHHHHHHHHHHHhhh
Confidence            899999999999999999999999999998865

>3sxp_A ADP-L-glycero-D-mannoheptose-6-epimerase; rossman fold, NAD binding, isomerase; HET: NAD; 2.55A {Helicobacter pylori}

Probab=99.94  E-value=2.1e-26  Score=220.74  Aligned_cols=207  Identities=19%  Similarity=0.180  Sum_probs=160.1

Q ss_pred             cccCCeEEEEcCCChhHHHHHHHHHH--cCCceEEEEecCCCC-----------cccccccCCCeEEEEcc---------
Q 017760            8 GIEGKTFLVTGGLGHVGSALCLELVR--RGAYQVRAFDLRTNS-----------PWSHLLINHGVHCIQGL---------   65 (366)
Q Consensus         8 ~~~~~~VlITGgtGfiG~~L~~~L~~--~g~~~V~~~dr~~~~-----------~~~~~~~~~~v~~i~gD---------   65 (366)
                      .+++++|+||||+||||+++++.|++  .| ++|++++|+...           .........+++++.+|         
T Consensus         7 ~~~~~~vlVTGatG~IG~~l~~~L~~~~~g-~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~Dl~d~~~~~~   85 (362)
T 3sxp_A            7 ELENQTILITGGAGFVGSNLAFHFQENHPK-AKVVVLDKFRSNTLFSNNRPSSLGHFKNLIGFKGEVIAADINNPLDLRR   85 (362)
T ss_dssp             CCTTCEEEEETTTSHHHHHHHHHHHHHCTT-SEEEEEECCCCC-------CCCCCCGGGGTTCCSEEEECCTTCHHHHHH
T ss_pred             hcCCCEEEEECCCCHHHHHHHHHHHhhCCC-CeEEEEECCCccccccccchhhhhhhhhccccCceEEECCCCCHHHHHH
Confidence            45678999999999999999999999  89 599999997651           11122233456777777         


Q ss_pred             --------------------------------------------------------------------------------
Q 017760           66 --------------------------------------------------------------------------------   65 (366)
Q Consensus        66 --------------------------------------------------------------------------------   65 (366)
                                                                                                      
T Consensus        86 ~~~~~~D~vih~A~~~~~~~~~~~~~~~~Nv~gt~~ll~aa~~~~~~~V~~SS~~vyg~~~~~~~E~~~~~p~~~Y~~sK  165 (362)
T 3sxp_A           86 LEKLHFDYLFHQAAVSDTTMLNQELVMKTNYQAFLNLLEIARSKKAKVIYASSAGVYGNTKAPNVVGKNESPENVYGFSK  165 (362)
T ss_dssp             HTTSCCSEEEECCCCCGGGCCCHHHHHHHHTHHHHHHHHHHHHTTCEEEEEEEGGGGCSCCSSBCTTSCCCCSSHHHHHH
T ss_pred             hhccCCCEEEECCccCCccccCHHHHHHHHHHHHHHHHHHHHHcCCcEEEeCcHHHhCCCCCCCCCCCCCCCCChhHHHH
Confidence                                                                                            


Q ss_pred             -------ccCCCCCceEEEEeCCccccCCCC------CCHHHHHHHHHcCCCCeeecCCCcceeceeHHHHHHHHHHHHh
Q 017760           66 -------RKNNRKCLYTCAVRPAAIYGPGEE------RHLPRIVSLAKLGLVPFKIGEPSVKTDWIYVDNLVLALILASM  132 (366)
Q Consensus        66 -------ks~~~~~l~~~ilRp~~iyGp~~~------~~l~~~i~~~~~g~~~~~~g~~~~~~~~v~vdDla~a~~~a~~  132 (366)
                             +.... .++++++||+++|||+..      ..++.++..+..|..+..++++++.++|+|++|+|++++.+++
T Consensus       166 ~~~E~~~~~~~~-~~~~~~lR~~~v~Gp~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~i~v~Dva~ai~~~~~  244 (362)
T 3sxp_A          166 LCMDEFVLSHSN-DNVQVGLRYFNVYGPREFYKEKTASMVLQLALGAMAFKEVKLFEFGEQLRDFVYIEDVIQANVKAMK  244 (362)
T ss_dssp             HHHHHHHHHTTT-TSCEEEEEECSEESTTCGGGGGGSCHHHHHHHHHHTTSEEECSGGGCCEEECEEHHHHHHHHHHHTT
T ss_pred             HHHHHHHHHHhc-cCCEEEEEeCceeCcCCCCCCcchhHHHHHHHHHHhCCCeEEECCCCeEEccEEHHHHHHHHHHHHh
Confidence                   00111 188999999999999874      5678888889999887777899999999999999999999986


Q ss_pred             ccccCCCCCCCCCCCCCccEEecCCCCCCHHHHHHHHHHhcCCCCCccccCHHHHHHHHHHHHHHHHhhhhccccccCCC
Q 017760          133 GLLDDIPGQKGRPIASGQPYFVSDGFPINTFEFIGPLLKTLDYDLPKSWLAVPHALFLGKVFSFFYSVLYPWLNRWWLPQ  212 (366)
Q Consensus       133 ~l~~~~~~~~~~~~~~g~~y~I~~~~~vs~~e~~~~l~~~lg~~~~~~~lp~~~~~~~a~~~e~~~~~~~~~~~~~~~~~  212 (366)
                                 .+ ..| +||+++++++|+.|+++.+.+.+| +.+....|.+.                          
T Consensus       245 -----------~~-~~g-~~~i~~~~~~s~~e~~~~i~~~~g-~~~~~~~~~~~--------------------------  284 (362)
T 3sxp_A          245 -----------AQ-KSG-VYNVGYSQARSYNEIVSILKEHLG-DFKVTYIKNPY--------------------------  284 (362)
T ss_dssp             -----------CS-SCE-EEEESCSCEEEHHHHHHHHHHHHC-CCEEECCC-----------------------------
T ss_pred             -----------cC-CCC-EEEeCCCCCccHHHHHHHHHHHcC-CCceEECCCCC--------------------------
Confidence                       22 346 999999999999999999999999 65544443220                          


Q ss_pred             CCCcHHhhhhhcccceecHHHHHHhcCCCCCCChHHHHHHHHHHHHhccccC
Q 017760          213 PLILPAEVYKVGVTHYFSLLKAKDELCYVPIVSPREGMAATISYWQDRKRKS  264 (366)
Q Consensus       213 p~l~~~ev~~~~~~~~~d~~ka~~~LG~~p~~~~~e~l~~~v~~~~~~~~~~  264 (366)
                              ........+|++|++++|||+|.++++++|+++++||+++...+
T Consensus       285 --------~~~~~~~~~d~~k~~~~lG~~p~~~l~e~l~~~~~~~~~~~~~~  328 (362)
T 3sxp_A          285 --------AFFQKHTQAHIEPTILDLDYTPLYDLESGIKDYLPHIHAIFKGQ  328 (362)
T ss_dssp             ------------CCCCBCCHHHHHHHCCCCCCCHHHHHHHHHHHHTCC----
T ss_pred             --------cCcccceecCHHHHHHHhCCCCCCCHHHHHHHHHHHHHHHhhcc
Confidence                    01122346899999999999999999999999999998765443

>3ehe_A UDP-glucose 4-epimerase (GALE-1); PSI-II, NYSGXRC, ST genomics, protein structure initiative, NEW YORK SGX resear for structural genomics; HET: NAD; 1.87A {Archaeoglobus fulgidus} SCOP: c.2.1.0

Probab=99.94  E-value=1.6e-26  Score=216.93  Aligned_cols=150  Identities=12%  Similarity=0.061  Sum_probs=114.9

Q ss_pred             CCceEEEEeCCccccCCCC-CCHHHHHHHHHcC-CCCeeecCCCcceeceeHHHHHHHHHHHHhccccCCCCCCCCCCCC
Q 017760           71 KCLYTCAVRPAAIYGPGEE-RHLPRIVSLAKLG-LVPFKIGEPSVKTDWIYVDNLVLALILASMGLLDDIPGQKGRPIAS  148 (366)
Q Consensus        71 ~~l~~~ilRp~~iyGp~~~-~~l~~~i~~~~~g-~~~~~~g~~~~~~~~v~vdDla~a~~~a~~~l~~~~~~~~~~~~~~  148 (366)
                      .+++++++||+++|||++. ..++.++..+..+ ..+..+|++++.++|+|++|+|++++.+++            +...
T Consensus       156 ~g~~~~ilRp~~v~G~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~i~v~Dva~a~~~~~~------------~~~~  223 (313)
T 3ehe_A          156 FDMQAWIYRFANVIGRRSTHGVIYDFIMKLKRNPEELEILGNGEQNKSYIYISDCVDAMLFGLR------------GDER  223 (313)
T ss_dssp             TTCEEEEEECSCEESTTCCCSHHHHHHHHHHHCTTEEEESTTSCCEECCEEHHHHHHHHHHHTT------------CCSS
T ss_pred             cCCCEEEEeeccccCcCCCcChHHHHHHHHHcCCCceEEeCCCCeEEeEEEHHHHHHHHHHHhc------------cCCC
Confidence            4889999999999999875 4566777777666 455578999999999999999999999985            2356


Q ss_pred             CccEEecCCCCCCHHHHHHHHHHhcCCCCCccccCHHHHHHHHHHHHHHHHhhhhccccccCCCCCCcHHhhhhhcccce
Q 017760          149 GQPYFVSDGFPINTFEFIGPLLKTLDYDLPKSWLAVPHALFLGKVFSFFYSVLYPWLNRWWLPQPLILPAEVYKVGVTHY  228 (366)
Q Consensus       149 g~~y~I~~~~~vs~~e~~~~l~~~lg~~~~~~~lp~~~~~~~a~~~e~~~~~~~~~~~~~~~~~p~l~~~ev~~~~~~~~  228 (366)
                      +++||+++++++|+.|+++.+.+.+|.+.+....|...                            ..+.+.    ....
T Consensus       224 ~~~~ni~~~~~~s~~e~~~~i~~~~g~~~~~~~~~~~~----------------------------~~~~~~----~~~~  271 (313)
T 3ehe_A          224 VNIFNIGSEDQIKVKRIAEIVCEELGLSPRFRFTGGDR----------------------------GWKGDV----PVML  271 (313)
T ss_dssp             EEEEECCCSCCEEHHHHHHHHHHHTTCCCEEEEC--------------------------------------------CC
T ss_pred             CceEEECCCCCeeHHHHHHHHHHHhCCCCceEECCCcc----------------------------CCcccc----ceec
Confidence            78999999999999999999999999875433222100                            000111    1235


Q ss_pred             ecHHHHHHhcCCCCCCChHHHHHHHHHHHHhccccCC
Q 017760          229 FSLLKAKDELCYVPIVSPREGMAATISYWQDRKRKSL  265 (366)
Q Consensus       229 ~d~~ka~~~LG~~p~~~~~e~l~~~v~~~~~~~~~~~  265 (366)
                      +|++|++ +|||+|+++++++|+++++||++++....
T Consensus       272 ~d~~k~~-~lG~~p~~~~~e~l~~~~~~~~~~~~~~~  307 (313)
T 3ehe_A          272 LSIEKLK-RLGWKPRYNSEEAVRMAVRDLVEDLDEEG  307 (313)
T ss_dssp             BCCHHHH-HHTCCCSCCHHHHHHHHHHHHHHHHHC--
T ss_pred             cCHHHHH-HcCCCCCCCHHHHHHHHHHHHHhCccccc
Confidence            8999995 59999999999999999999998766543

>3vps_A TUNA, NAD-dependent epimerase/dehydratase; tunicamycins, biosynthesis, EXO-glycal, rossman transferase; HET: UD1 NAD; 1.90A {Streptomyces chartreusis}

Probab=99.94  E-value=9.2e-27  Score=218.63  Aligned_cols=147  Identities=17%  Similarity=0.201  Sum_probs=121.0

Q ss_pred             CCCc-eEEEEeCCccccCCCC--CCHHHHHHHHHcCCCCeeecCCCcceeceeHHHHHHHHHHHHhccccCCCCCCCCCC
Q 017760           70 RKCL-YTCAVRPAAIYGPGEE--RHLPRIVSLAKLGLVPFKIGEPSVKTDWIYVDNLVLALILASMGLLDDIPGQKGRPI  146 (366)
Q Consensus        70 ~~~l-~~~ilRp~~iyGp~~~--~~l~~~i~~~~~g~~~~~~g~~~~~~~~v~vdDla~a~~~a~~~l~~~~~~~~~~~~  146 (366)
                      ..++ +++++||+.+|||++.  ..++.++..+..+..+.++++++..++|+|++|+|++++.+++           .+.
T Consensus       160 ~~~~~~~~ilRp~~v~G~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~v~Dva~~~~~~~~-----------~~~  228 (321)
T 3vps_A          160 ASVAPEVGIVRFFNVYGPGERPDALVPRLCANLLTRNELPVEGDGEQRRDFTYITDVVDKLVALAN-----------RPL  228 (321)
T ss_dssp             SSSSCEEEEEEECEEECTTCCTTSHHHHHHHHHHHHSEEEEETTSCCEECEEEHHHHHHHHHHGGG-----------SCC
T ss_pred             HcCCCceEEEEeccccCcCCCCCChHHHHHHHHHcCCCeEEeCCCCceEceEEHHHHHHHHHHHHh-----------cCC
Confidence            3577 9999999999999875  4578888888888887888999999999999999999999997           222


Q ss_pred             CCCccEEecCCCCCCHHHHHHHHHHhcCCCCCccccCHHHHHHHHHHHHHHHHhhhhccccccCCCCCCcHHhhhhhccc
Q 017760          147 ASGQPYFVSDGFPINTFEFIGPLLKTLDYDLPKSWLAVPHALFLGKVFSFFYSVLYPWLNRWWLPQPLILPAEVYKVGVT  226 (366)
Q Consensus       147 ~~g~~y~I~~~~~vs~~e~~~~l~~~lg~~~~~~~lp~~~~~~~a~~~e~~~~~~~~~~~~~~~~~p~l~~~ev~~~~~~  226 (366)
                       .| +||+++++++|+.|+++.+. .+|.+.+....|.                            +.       ....+
T Consensus       229 -~g-~~~i~~~~~~s~~e~~~~i~-~~g~~~~~~~~~~----------------------------~~-------~~~~~  270 (321)
T 3vps_A          229 -PS-VVNFGSGQSLSVNDVIRILQ-ATSPAAEVARKQP----------------------------RP-------NEITE  270 (321)
T ss_dssp             -CS-EEEESCSCCEEHHHHHHHHH-TTCTTCEEEEECC----------------------------CT-------TCCSB
T ss_pred             -CC-eEEecCCCcccHHHHHHHHH-HhCCCCccccCCC----------------------------CC-------CCcce
Confidence             36 99999999999999999999 9998765443321                            10       01123


Q ss_pred             ceecHHHHHHhcCCCC-CCChHHHHHHHHHHHHhccccCC
Q 017760          227 HYFSLLKAKDELCYVP-IVSPREGMAATISYWQDRKRKSL  265 (366)
Q Consensus       227 ~~~d~~ka~~~LG~~p-~~~~~e~l~~~v~~~~~~~~~~~  265 (366)
                      ..+|++|++++|||+| .++++++|+++++||++++....
T Consensus       271 ~~~d~~k~~~~lG~~p~~~~~~~~l~~~~~~~~~~~~~~~  310 (321)
T 3vps_A          271 FRADTALQTRQIGERSGGIGIEEGIRLTLEWWQSRDLDDI  310 (321)
T ss_dssp             CCBCCHHHHHHHCCCSCCCCHHHHHHHHHHHHHTSCTTC-
T ss_pred             eeccHHHHHHHhCCCCCcCCHHHHHHHHHHHHHhCCCchh
Confidence            4689999999999999 88999999999999998776543

>4b4o_A Epimerase family protein SDR39U1; isomerase; HET: NDP PE4; 2.70A {Homo sapiens}

Probab=99.94  E-value=2.3e-25  Score=207.80  Aligned_cols=203  Identities=16%  Similarity=0.049  Sum_probs=150.1

Q ss_pred             CeEEEEcCCChhHHHHHHHHHHcCCceEEEEecCCCCccc-------ccccCCCeEEEE-c----c--------------
Q 017760           12 KTFLVTGGLGHVGSALCLELVRRGAYQVRAFDLRTNSPWS-------HLLINHGVHCIQ-G----L--------------   65 (366)
Q Consensus        12 ~~VlITGgtGfiG~~L~~~L~~~g~~~V~~~dr~~~~~~~-------~~~~~~~v~~i~-g----D--------------   65 (366)
                      |||||||||||||++|+++|+++| |+|++++|++.....       ..+...+..+.. +    +              
T Consensus         1 MkILVTGatGfIG~~L~~~L~~~G-~~V~~l~R~~~~~~~~~~~~~~~~l~~~d~vihla~~~i~~~~~~~~~~~~~~~~   79 (298)
T 4b4o_A            1 MRVLVGGGTGFIGTALTQLLNARG-HEVTLVSRKPGPGRITWDELAASGLPSCDAAVNLAGENILNPLRRWNETFQKEVL   79 (298)
T ss_dssp             CEEEEETTTSHHHHHHHHHHHHTT-CEEEEEESSCCTTEEEHHHHHHHCCCSCSEEEECCCCCSSCTTSCCCHHHHHHHH
T ss_pred             CEEEEECCCCHHHHHHHHHHHHCC-CEEEEEECCCCcCeeecchhhHhhccCCCEEEEeccCcccchhhhhhhhhhhhhh
Confidence            689999999999999999999999 699999997654321       111111111111 0    0              


Q ss_pred             ---------------------------------------------------------------ccCCCCCceEEEEeCCc
Q 017760           66 ---------------------------------------------------------------RKNNRKCLYTCAVRPAA   82 (366)
Q Consensus        66 ---------------------------------------------------------------ks~~~~~l~~~ilRp~~   82 (366)
                                                                                     ......+++++++||+.
T Consensus        80 ~~~v~~t~~l~~~~~~~~~~~~~~i~~Ss~~vyg~~~~~~~~E~~p~~~~~~~~~~~~~~e~~~~~~~~~~~~~~~r~~~  159 (298)
T 4b4o_A           80 GSRLETTQLLAKAITKAPQPPKAWVLVTGVAYYQPSLTAEYDEDSPGGDFDFFSNLVTKWEAAARLPGDSTRQVVVRSGV  159 (298)
T ss_dssp             HHHHHHHHHHHHHHHHCSSCCSEEEEEEEGGGSCCCSSCCBCTTCCCSCSSHHHHHHHHHHHHHCCSSSSSEEEEEEECE
T ss_pred             hHHHHHHHHHHHHHHHhCCCceEEEEEeeeeeecCCCCCcccccCCccccchhHHHHHHHHHHHHhhccCCceeeeeeee
Confidence                                                                           11445688999999999


Q ss_pred             cccCCCCCCHHHHHHHHHcCCCCeeecCCCcceeceeHHHHHHHHHHHHhccccCCCCCCCCCCCCCccEEecCCCCCCH
Q 017760           83 IYGPGEERHLPRIVSLAKLGLVPFKIGEPSVKTDWIYVDNLVLALILASMGLLDDIPGQKGRPIASGQPYFVSDGFPINT  162 (366)
Q Consensus        83 iyGp~~~~~l~~~i~~~~~g~~~~~~g~~~~~~~~v~vdDla~a~~~a~~~l~~~~~~~~~~~~~~g~~y~I~~~~~vs~  162 (366)
                      ||||++ ..+..+......|.. ..+|++++.++||||+|+|+++..+++           ++. .+++||+++++++|+
T Consensus       160 v~g~~~-~~~~~~~~~~~~~~~-~~~g~g~~~~~~ihv~Dva~a~~~~~~-----------~~~-~~g~yn~~~~~~~t~  225 (298)
T 4b4o_A          160 VLGRGG-GAMGHMLLPFRLGLG-GPIGSGHQFFPWIHIGDLAGILTHALE-----------ANH-VHGVLNGVAPSSATN  225 (298)
T ss_dssp             EECTTS-HHHHHHHHHHHTTCC-CCBTTSCSBCCEEEHHHHHHHHHHHHH-----------CTT-CCEEEEESCSCCCBH
T ss_pred             EEcCCC-CchhHHHHHHhcCCc-ceecccCceeecCcHHHHHHHHHHHHh-----------CCC-CCCeEEEECCCccCH
Confidence            999985 356777777777765 457999999999999999999999997           333 345999999999999


Q ss_pred             HHHHHHHHHhcCCCCCccccCHHHHHHHHHHHHHHHHhhhhccccccCCCCCCcHHhhhhhcccceecHHHHHHhcCCCC
Q 017760          163 FEFIGPLLKTLDYDLPKSWLAVPHALFLGKVFSFFYSVLYPWLNRWWLPQPLILPAEVYKVGVTHYFSLLKAKDELCYVP  242 (366)
Q Consensus       163 ~e~~~~l~~~lg~~~~~~~lp~~~~~~~a~~~e~~~~~~~~~~~~~~~~~p~l~~~ev~~~~~~~~~d~~ka~~~LG~~p  242 (366)
                      .|+++.+++.+|.+. .+.+|.++..++.  .++...+                      +..+...+++|+++ +||++
T Consensus       226 ~e~~~~ia~~lgrp~-~~pvP~~~~~~~~--g~~~~~~----------------------~l~~~rv~~~kl~~-~Gf~f  279 (298)
T 4b4o_A          226 AEFAQTFGAALGRRA-FIPLPSAVVQAVF--GRQRAIM----------------------LLEGQKVIPRRTLA-TGYQY  279 (298)
T ss_dssp             HHHHHHHHHHHTCCC-CCCBCHHHHHHHH--CHHHHHH----------------------HHCCCCBCCHHHHH-TTCCC
T ss_pred             HHHHHHHHHHhCcCC-cccCCHHHHHHHh--cchhHHH----------------------hhCCCEEcHHHHHH-CCCCC
Confidence            999999999999764 4678887765431  1111111                      11122357788865 99999


Q ss_pred             CC-ChHHHHHHHHH
Q 017760          243 IV-SPREGMAATIS  255 (366)
Q Consensus       243 ~~-~~~e~l~~~v~  255 (366)
                      ++ +++++|++.++
T Consensus       280 ~yp~l~~al~~l~~  293 (298)
T 4b4o_A          280 SFPELGAALKEIAE  293 (298)
T ss_dssp             SCCSHHHHHHHHHH
T ss_pred             CCCCHHHHHHHHHH
Confidence            98 69999999887

>1sb8_A WBPP; epimerase, 4-epimerase, UDP-galnac, UDP-GLCNAC, SDR, G SYK, UDP, N-acetylglucosamine, N- acetylgalactosamine, UDP-GLC, isomerase; HET: NAD UD2; 2.10A {Pseudomonas aeruginosa} SCOP: c.2.1.2 PDB: 1sb9_A*

Probab=99.94  E-value=2.5e-26  Score=219.22  Aligned_cols=208  Identities=20%  Similarity=0.201  Sum_probs=159.7

Q ss_pred             ccCCeEEEEcCCChhHHHHHHHHHHcCCceEEEEecCCCCcc--cccc-------cCCCeEEEEcc--------------
Q 017760            9 IEGKTFLVTGGLGHVGSALCLELVRRGAYQVRAFDLRTNSPW--SHLL-------INHGVHCIQGL--------------   65 (366)
Q Consensus         9 ~~~~~VlITGgtGfiG~~L~~~L~~~g~~~V~~~dr~~~~~~--~~~~-------~~~~v~~i~gD--------------   65 (366)
                      +++++|+||||+||+|+++++.|+++| ++|++++|++....  ...+       ...+++++++|              
T Consensus        25 ~~~~~vlVtGatG~iG~~l~~~L~~~g-~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~~~~~Dl~d~~~~~~~~~~~  103 (352)
T 1sb8_A           25 AQPKVWLITGVAGFIGSNLLETLLKLD-QKVVGLDNFATGHQRNLDEVRSLVSEKQWSNFKFIQGDIRNLDDCNNACAGV  103 (352)
T ss_dssp             HSCCEEEEETTTSHHHHHHHHHHHHTT-CEEEEEECCSSCCHHHHHHHHHHSCHHHHTTEEEEECCTTSHHHHHHHHTTC
T ss_pred             ccCCeEEEECCCcHHHHHHHHHHHHCC-CEEEEEeCCCccchhhHHHHhhhcccccCCceEEEECCCCCHHHHHHHhcCC
Confidence            557899999999999999999999999 59999999764321  0100       02467777777              


Q ss_pred             --------------------------------------------------------c---------------------c-
Q 017760           66 --------------------------------------------------------R---------------------K-   67 (366)
Q Consensus        66 --------------------------------------------------------k---------------------s-   67 (366)
                                                                              .                     . 
T Consensus       104 d~vih~A~~~~~~~~~~~~~~~~~~n~~~~~~l~~a~~~~~~~~~v~~SS~~~~~~~~~~~~~E~~~~~~~~~Y~~sK~~  183 (352)
T 1sb8_A          104 DYVLHQAALGSVPRSINDPITSNATNIDGFLNMLIAARDAKVQSFTYAASSSTYGDHPGLPKVEDTIGKPLSPYAVTKYV  183 (352)
T ss_dssp             SEEEECCSCCCHHHHHHCHHHHHHHHTHHHHHHHHHHHHTTCSEEEEEEEGGGGTTCCCSSBCTTCCCCCCSHHHHHHHH
T ss_pred             CEEEECCcccCchhhhhCHHHHHHHHHHHHHHHHHHHHHcCCCEEEEeccHHhcCCCCCCCCCCCCCCCCCChhHHHHHH
Confidence                                                                    0                     0 


Q ss_pred             --------CCCCCceEEEEeCCccccCCCC------CCHHHHHHHHHcCCCCeeecCCCcceeceeHHHHHHHHHHHHhc
Q 017760           68 --------NNRKCLYTCAVRPAAIYGPGEE------RHLPRIVSLAKLGLVPFKIGEPSVKTDWIYVDNLVLALILASMG  133 (366)
Q Consensus        68 --------~~~~~l~~~ilRp~~iyGp~~~------~~l~~~i~~~~~g~~~~~~g~~~~~~~~v~vdDla~a~~~a~~~  133 (366)
                              ..+.+++++++||+.+|||+..      ..++.++..+.+|..+.++|++++.++|+|++|+|++++.+++.
T Consensus       184 ~e~~~~~~~~~~g~~~~ilRp~~v~G~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~g~~~~~~i~v~Dva~a~~~~~~~  263 (352)
T 1sb8_A          184 NELYADVFSRCYGFSTIGLRYFNVFGRRQDPNGAYAAVIPKWTSSMIQGDDVYINGDGETSRDFCYIENTVQANLLAATA  263 (352)
T ss_dssp             HHHHHHHHHHHHCCCCEEEEECCEECTTCCCCSTTCCHHHHHHHHHHHTCCCEEESSSCCEECCEEHHHHHHHHHHHHTC
T ss_pred             HHHHHHHHHHHcCCCEEEEEECceeCcCCCCCcchhhHHHHHHHHHHCCCCcEEeCCCCceEeeEEHHHHHHHHHHHHhc
Confidence                    1123688999999999999864      34677888888888877889999999999999999999999862


Q ss_pred             cccCCCCCCCCCCCCCccEEecCCCCCCHHHHHHHHHHhc---CCCCCccccCHHHHHHHHHHHHHHHHhhhhccccccC
Q 017760          134 LLDDIPGQKGRPIASGQPYFVSDGFPINTFEFIGPLLKTL---DYDLPKSWLAVPHALFLGKVFSFFYSVLYPWLNRWWL  210 (366)
Q Consensus       134 l~~~~~~~~~~~~~~g~~y~I~~~~~vs~~e~~~~l~~~l---g~~~~~~~lp~~~~~~~a~~~e~~~~~~~~~~~~~~~  210 (366)
                                .+...+++||+++++++|+.|+++.+.+.+   |.+.+....                          +.
T Consensus       264 ----------~~~~~~~~~ni~~~~~~s~~e~~~~i~~~~~~~g~~~~~~~~--------------------------~~  307 (352)
T 1sb8_A          264 ----------GLDARNQVYNIAVGGRTSLNQLFFALRDGLAENGVSYHREPV--------------------------YR  307 (352)
T ss_dssp             ----------CGGGCSEEEEESCSCCEEHHHHHHHHHHHHHHTTCCCCCCCE--------------------------EE
T ss_pred             ----------cccCCCceEEeCCCCCccHHHHHHHHHHHHHhcCCCCCCCce--------------------------ec
Confidence                      234568899999999999999999999999   876542100                          00


Q ss_pred             CCCCCcHHhhhhhcccceecHHHHHHhcCCCCCCChHHHHHHHHHHHHhc
Q 017760          211 PQPLILPAEVYKVGVTHYFSLLKAKDELCYVPIVSPREGMAATISYWQDR  260 (366)
Q Consensus       211 ~~p~l~~~ev~~~~~~~~~d~~ka~~~LG~~p~~~~~e~l~~~v~~~~~~  260 (366)
                      +.   .+.+    .....+|++|++++|||+|+++++++|+++++||+++
T Consensus       308 ~~---~~~~----~~~~~~d~~k~~~~lG~~p~~~~~e~l~~~~~~~~~~  350 (352)
T 1sb8_A          308 DF---REGD----VRHSLADISKAAKLLGYAPKYDVSAGVALAMPWYIMF  350 (352)
T ss_dssp             CC---CTTC----CSBCCBCCHHHHHHTCCCCCCCHHHHHHHHHHHHHHH
T ss_pred             CC---Cccc----hhhccCCHHHHHHHhCCCCCCCHHHHHHHHHHHHHHh
Confidence            00   0111    1233689999999999999999999999999999764

>2b69_A UDP-glucuronate decarboxylase 1; UDP-glucoronic acid decarboxylase, structural genomics, STRU genomics consortium, SGC, lyase; HET: MSE NAD UDP; 1.21A {Homo sapiens} SCOP: c.2.1.2 PDB: 4ef7_A*

Probab=99.93  E-value=2.2e-25  Score=211.92  Aligned_cols=204  Identities=21%  Similarity=0.214  Sum_probs=156.7

Q ss_pred             ccCCeEEEEcCCChhHHHHHHHHHHcCCceEEEEecCCCCccc--ccc-cCCCeEEEEcc--------------------
Q 017760            9 IEGKTFLVTGGLGHVGSALCLELVRRGAYQVRAFDLRTNSPWS--HLL-INHGVHCIQGL--------------------   65 (366)
Q Consensus         9 ~~~~~VlITGgtGfiG~~L~~~L~~~g~~~V~~~dr~~~~~~~--~~~-~~~~v~~i~gD--------------------   65 (366)
                      +++++|+||||+||+|++|++.|+++| ++|++++|+......  ... ...+++++.+|                    
T Consensus        25 ~~~~~vlVtGatG~iG~~l~~~L~~~g-~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~D~~~~~~~~~d~vih~A~~~~  103 (343)
T 2b69_A           25 KDRKRILITGGAGFVGSHLTDKLMMDG-HEVTVVDNFFTGRKRNVEHWIGHENFELINHDVVEPLYIEVDQIYHLASPAS  103 (343)
T ss_dssp             --CCEEEEETTTSHHHHHHHHHHHHTT-CEEEEEECCSSCCGGGTGGGTTCTTEEEEECCTTSCCCCCCSEEEECCSCCS
T ss_pred             cCCCEEEEEcCccHHHHHHHHHHHHCC-CEEEEEeCCCccchhhhhhhccCCceEEEeCccCChhhcCCCEEEECccccC
Confidence            457899999999999999999999999 599999987543211  111 12345666555                    


Q ss_pred             -------------------------------------------c--------------c---------------------
Q 017760           66 -------------------------------------------R--------------K---------------------   67 (366)
Q Consensus        66 -------------------------------------------k--------------s---------------------   67 (366)
                                                                 .              .                     
T Consensus       104 ~~~~~~~~~~~~~~n~~~~~~l~~a~~~~~~~~v~~SS~~v~g~~~~~~~~E~~~~~~~~~~~~~~Y~~sK~~~E~~~~~  183 (343)
T 2b69_A          104 PPNYMYNPIKTLKTNTIGTLNMLGLAKRVGARLLLASTSEVYGDPEVHPQSEDYWGHVNPIGPRACYDEGKRVAETMCYA  183 (343)
T ss_dssp             HHHHTTCHHHHHHHHHHHHHHHHHHHHHHTCEEEEEEEGGGGBSCSSSSBCTTCCCBCCSSSTTHHHHHHHHHHHHHHHH
T ss_pred             chhhhhCHHHHHHHHHHHHHHHHHHHHHhCCcEEEECcHHHhCCCCCCCCcccccccCCCCCCCCchHHHHHHHHHHHHH
Confidence                                                       0              0                     


Q ss_pred             -CCCCCceEEEEeCCccccCCCC----CCHHHHHHHHHcCCCCeeecCCCcceeceeHHHHHHHHHHHHhccccCCCCCC
Q 017760           68 -NNRKCLYTCAVRPAAIYGPGEE----RHLPRIVSLAKLGLVPFKIGEPSVKTDWIYVDNLVLALILASMGLLDDIPGQK  142 (366)
Q Consensus        68 -~~~~~l~~~ilRp~~iyGp~~~----~~l~~~i~~~~~g~~~~~~g~~~~~~~~v~vdDla~a~~~a~~~l~~~~~~~~  142 (366)
                       ....+++++++||+.+|||+..    ..++.++..+.+|..+.++++++..++|+|++|+|++++.+++          
T Consensus       184 ~~~~~~~~~~ilrp~~v~G~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~v~Dva~a~~~~~~----------  253 (343)
T 2b69_A          184 YMKQEGVEVRVARIFNTFGPRMHMNDGRVVSNFILQALQGEPLTVYGSGSQTRAFQYVSDLVNGLVALMN----------  253 (343)
T ss_dssp             HHHHHCCCEEEEEECCEECTTCCTTCCCHHHHHHHHHHHTCCEEEESSSCCEEECEEHHHHHHHHHHHHT----------
T ss_pred             HHHHhCCcEEEEEEcceeCcCCCCCcccHHHHHHHHHHcCCCceEcCCCCeEEeeEeHHHHHHHHHHHHh----------
Confidence             0112578999999999999753    4567788888888877778999999999999999999999885          


Q ss_pred             CCCCCCCccEEecCCCCCCHHHHHHHHHHhcCCCCCccccCHHHHHHHHHHHHHHHHhhhhccccccCCCCCCcHHhhhh
Q 017760          143 GRPIASGQPYFVSDGFPINTFEFIGPLLKTLDYDLPKSWLAVPHALFLGKVFSFFYSVLYPWLNRWWLPQPLILPAEVYK  222 (366)
Q Consensus       143 ~~~~~~g~~y~I~~~~~vs~~e~~~~l~~~lg~~~~~~~lp~~~~~~~a~~~e~~~~~~~~~~~~~~~~~p~l~~~ev~~  222 (366)
                       .+  .+++||+++++++|+.|+++.+.+.+|.+.+...+|..                            ..   +   
T Consensus       254 -~~--~~~~~~i~~~~~~s~~e~~~~i~~~~g~~~~~~~~p~~----------------------------~~---~---  296 (343)
T 2b69_A          254 -SN--VSSPVNLGNPEEHTILEFAQLIKNLVGSGSEIQFLSEA----------------------------QD---D---  296 (343)
T ss_dssp             -SS--CCSCEEESCCCEEEHHHHHHHHHHHHTCCCCEEEECCC----------------------------TT---C---
T ss_pred             -cC--CCCeEEecCCCCCcHHHHHHHHHHHhCCCCCceeCCCC----------------------------CC---C---
Confidence             22  36799999999999999999999999987664433310                            00   0   


Q ss_pred             hcccceecHHHHHHhcCCCCCCChHHHHHHHHHHHHhcc
Q 017760          223 VGVTHYFSLLKAKDELCYVPIVSPREGMAATISYWQDRK  261 (366)
Q Consensus       223 ~~~~~~~d~~ka~~~LG~~p~~~~~e~l~~~v~~~~~~~  261 (366)
                       .....+|++|++++|||+|.++++++|+++++||+++.
T Consensus       297 -~~~~~~d~~k~~~~lG~~p~~~l~e~l~~~~~~~~~~~  334 (343)
T 2b69_A          297 -PQKRKPDIKKAKLMLGWEPVVPLEEGLNKAIHYFRKEL  334 (343)
T ss_dssp             -CCCCCBCCHHHHHHHCCCCCSCHHHHHHHHHHHHHHHH
T ss_pred             -CceecCCHHHHHHHcCCCCCCCHHHHHHHHHHHHHHHH
Confidence             11235799999999999999999999999999998754

>2hun_A 336AA long hypothetical DTDP-glucose 4,6-dehydrat; rossmann fold, structural genomics, NPPSFA; HET: NAD; 2.07A {Pyrococcus horikoshii}

Probab=99.93  E-value=2.3e-25  Score=210.86  Aligned_cols=206  Identities=21%  Similarity=0.287  Sum_probs=155.6

Q ss_pred             cCCeEEEEcCCChhHHHHHHHHHHcC-CceEEEEecCCCCcccccc----cCCCeEEEEcc-------------------
Q 017760           10 EGKTFLVTGGLGHVGSALCLELVRRG-AYQVRAFDLRTNSPWSHLL----INHGVHCIQGL-------------------   65 (366)
Q Consensus        10 ~~~~VlITGgtGfiG~~L~~~L~~~g-~~~V~~~dr~~~~~~~~~~----~~~~v~~i~gD-------------------   65 (366)
                      ++|+|+||||+||+|+++++.|+++| -++|++++|.........+    ...+++++.+|                   
T Consensus         2 ~~m~vlVTGatG~iG~~l~~~L~~~g~~~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~Dl~d~~~~~~~~~~~d~vih   81 (336)
T 2hun_A            2 HSMKLLVTGGMGFIGSNFIRYILEKHPDWEVINIDKLGYGSNPANLKDLEDDPRYTFVKGDVADYELVKELVRKVDGVVH   81 (336)
T ss_dssp             -CCEEEEETTTSHHHHHHHHHHHHHCTTCEEEEEECCCTTCCGGGGTTTTTCTTEEEEECCTTCHHHHHHHHHTCSEEEE
T ss_pred             CCCeEEEECCCchHHHHHHHHHHHhCCCCEEEEEecCcccCchhHHhhhccCCceEEEEcCCCCHHHHHHHhhCCCEEEE
Confidence            45789999999999999999999996 1489999987532211111    13467778887                   


Q ss_pred             -------------------------------------------------------------------------c------
Q 017760           66 -------------------------------------------------------------------------R------   66 (366)
Q Consensus        66 -------------------------------------------------------------------------k------   66 (366)
                                                                                               |      
T Consensus        82 ~A~~~~~~~~~~~~~~~~~~Nv~g~~~l~~a~~~~~~~~~iv~~SS~~vyg~~~~~~~~E~~~~~~~~~Y~~sK~~~e~~  161 (336)
T 2hun_A           82 LAAESHVDRSISSPEIFLHSNVIGTYTLLESIRRENPEVRFVHVSTDEVYGDILKGSFTENDRLMPSSPYSATKAASDML  161 (336)
T ss_dssp             CCCCCCHHHHHHCTHHHHHHHHHHHHHHHHHHHHHCTTSEEEEEEEGGGGCCCSSSCBCTTBCCCCCSHHHHHHHHHHHH
T ss_pred             CCCCcChhhhhhCHHHHHHHHHHHHHHHHHHHHHhCCCcEEEEeccHHHHCCCCCCCcCCCCCCCCCCccHHHHHHHHHH
Confidence                                                                                     0      


Q ss_pred             ---cCCCCCceEEEEeCCccccCCCC--CCHHHHHHHHHcCCCCeeecCCCcceeceeHHHHHHHHHHHHhccccCCCCC
Q 017760           67 ---KNNRKCLYTCAVRPAAIYGPGEE--RHLPRIVSLAKLGLVPFKIGEPSVKTDWIYVDNLVLALILASMGLLDDIPGQ  141 (366)
Q Consensus        67 ---s~~~~~l~~~ilRp~~iyGp~~~--~~l~~~i~~~~~g~~~~~~g~~~~~~~~v~vdDla~a~~~a~~~l~~~~~~~  141 (366)
                         ...+.+++++++||+.+|||+..  ..++.++..+.+|..+.+++++++.++|+|++|+|++++.+++.        
T Consensus       162 ~~~~~~~~~~~~~ilrp~~v~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~v~Dva~~~~~~~~~--------  233 (336)
T 2hun_A          162 VLGWTRTYNLNASITRCTNNYGPYQFPEKLIPKTIIRASLGLKIPIYGTGKNVRDWLYVEDHVRAIELVLLK--------  233 (336)
T ss_dssp             HHHHHHHTTCEEEEEEECEEESTTCCTTSHHHHHHHHHHTTCCEEEETC---CEEEEEHHHHHHHHHHHHHH--------
T ss_pred             HHHHHHHhCCCEEEEeeeeeeCcCCCcCchHHHHHHHHHcCCCceEeCCCCceeeeEEHHHHHHHHHHHHhC--------
Confidence               01124788999999999999874  45677888888888777789988999999999999999999862        


Q ss_pred             CCCCCCCCccEEecCCCCCCHHHHHHHHHHhcCCCCCccccCHHHHHHHHHHHHHHHHhhhhccccccCCCCCCcHHhhh
Q 017760          142 KGRPIASGQPYFVSDGFPINTFEFIGPLLKTLDYDLPKSWLAVPHALFLGKVFSFFYSVLYPWLNRWWLPQPLILPAEVY  221 (366)
Q Consensus       142 ~~~~~~~g~~y~I~~~~~vs~~e~~~~l~~~lg~~~~~~~lp~~~~~~~a~~~e~~~~~~~~~~~~~~~~~p~l~~~ev~  221 (366)
                          ...|++||+++++++|+.|+++.+.+.+|.+.+.+..                           .+...   .+  
T Consensus       234 ----~~~g~~~~v~~~~~~s~~e~~~~i~~~~g~~~~~~~~---------------------------~~~~~---~~--  277 (336)
T 2hun_A          234 ----GESREIYNISAGEEKTNLEVVKIILRLMGKGEELIEL---------------------------VEDRP---GH--  277 (336)
T ss_dssp             ----CCTTCEEEECCSCEECHHHHHHHHHHHTTCCSTTEEE---------------------------ECCCT---TC--
T ss_pred             ----CCCCCEEEeCCCCcccHHHHHHHHHHHhCCCcccccc---------------------------cCCCC---Cc--
Confidence                2367899999999999999999999999976542210                           01100   00  


Q ss_pred             hhcccceecHHHHHHhcCCCCCCChHHHHHHHHHHHHhcc
Q 017760          222 KVGVTHYFSLLKAKDELCYVPIVSPREGMAATISYWQDRK  261 (366)
Q Consensus       222 ~~~~~~~~d~~ka~~~LG~~p~~~~~e~l~~~v~~~~~~~  261 (366)
                        .....+|++|++++|||+|.++++++|+++++||+++.
T Consensus       278 --~~~~~~d~~k~~~~lG~~p~~~~~~~l~~~~~~~~~~~  315 (336)
T 2hun_A          278 --DLRYSLDSWKITRDLKWRPKYTFDEGIKKTIDWYLKNE  315 (336)
T ss_dssp             --CCCCCBCCHHHHHHHCCCCSSCHHHHHHHHHHHHHHTH
T ss_pred             --hhhhcCCHHHHHHHhCCCCCCCHHHHHHHHHHHHHhCc
Confidence              11235899999999999999999999999999998753

>2c20_A UDP-glucose 4-epimerase; carbohydrate metabolism, galactose metabolism, isomerase, NAD, spine; HET: NAD; 2.7A {Bacillus anthracis}

Probab=99.93  E-value=4.2e-25  Score=208.48  Aligned_cols=205  Identities=19%  Similarity=0.213  Sum_probs=150.5

Q ss_pred             CCeEEEEcCCChhHHHHHHHHHHcCCceEEEEecCCCCcccccccCCCeEEEEcc-------------------------
Q 017760           11 GKTFLVTGGLGHVGSALCLELVRRGAYQVRAFDLRTNSPWSHLLINHGVHCIQGL-------------------------   65 (366)
Q Consensus        11 ~~~VlITGgtGfiG~~L~~~L~~~g~~~V~~~dr~~~~~~~~~~~~~~v~~i~gD-------------------------   65 (366)
                      ||+|+||||+||+|+++++.|+++| ++|++++|+..... ..+ ..+++++.+|                         
T Consensus         1 M~~ilVtGatG~iG~~l~~~L~~~g-~~V~~~~r~~~~~~-~~~-~~~~~~~~~D~~~~~~~~~~~~~~~~d~vih~a~~   77 (330)
T 2c20_A            1 MNSILICGGAGYIGSHAVKKLVDEG-LSVVVVDNLQTGHE-DAI-TEGAKFYNGDLRDKAFLRDVFTQENIEAVMHFAAD   77 (330)
T ss_dssp             -CEEEEETTTSHHHHHHHHHHHHTT-CEEEEEECCSSCCG-GGS-CTTSEEEECCTTCHHHHHHHHHHSCEEEEEECCCC
T ss_pred             CCEEEEECCCcHHHHHHHHHHHhCC-CEEEEEeCCCcCch-hhc-CCCcEEEECCCCCHHHHHHHHhhcCCCEEEECCcc
Confidence            4789999999999999999999999 59999998754321 111 1245555555                         


Q ss_pred             -----------------------------------------------------------------------------ccC
Q 017760           66 -----------------------------------------------------------------------------RKN   68 (366)
Q Consensus        66 -----------------------------------------------------------------------------ks~   68 (366)
                                                                                                   ...
T Consensus        78 ~~~~~~~~~~~~~~~~n~~~~~~l~~a~~~~~~~~~v~~Ss~~~~~~~~~~~~~E~~~~~~~~~Y~~sK~~~e~~~~~~~  157 (330)
T 2c20_A           78 SLVGVSMEKPLQYYNNNVYGALCLLEVMDEFKVDKFIFSSTAATYGEVDVDLITEETMTNPTNTYGETKLAIEKMLHWYS  157 (330)
T ss_dssp             CCHHHHHHSHHHHHHHHHHHHHHHHHHHHHTTCCEEEEECCGGGGCSCSSSSBCTTSCCCCSSHHHHHHHHHHHHHHHHH
T ss_pred             cCccccccCHHHHHHHHhHHHHHHHHHHHHcCCCEEEEeCCceeeCCCCCCCCCcCCCCCCCChHHHHHHHHHHHHHHHH
Confidence                                                                                         001


Q ss_pred             CCCCceEEEEeCCccccCCC-----------CCCHHHHHHHHHc-CCCCeeec------CCCcceeceeHHHHHHHHHHH
Q 017760           69 NRKCLYTCAVRPAAIYGPGE-----------ERHLPRIVSLAKL-GLVPFKIG------EPSVKTDWIYVDNLVLALILA  130 (366)
Q Consensus        69 ~~~~l~~~ilRp~~iyGp~~-----------~~~l~~~i~~~~~-g~~~~~~g------~~~~~~~~v~vdDla~a~~~a  130 (366)
                      .+.+++++++||+.+|||+.           ..+++.++..+.. +..+.++|      ++++.++|+|++|+|++++.+
T Consensus       158 ~~~~~~~~ilrp~~v~G~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~g~~~~~~v~v~Dva~a~~~~  237 (330)
T 2c20_A          158 QASNLRYKIFRYFNVAGATPNGIIGEDHRPETHLIPLVLQVALGQREKIMMFGDDYNTPDGTCIRDYIHVEDLVAAHFLG  237 (330)
T ss_dssp             HTSSCEEEEEECSEEECCCTTCSSCCCCSSCCSHHHHHHHHHTTSSSCEEEECSCCSSSSSSCEECEEEHHHHHHHHHHH
T ss_pred             HHhCCcEEEEecCcccCCCCcCccccccccccchHHHHHHHHhhcCCCeEEeCCccccCCCceeEeeEeHHHHHHHHHHH
Confidence            22478999999999999963           2334555554443 33445555      678899999999999999999


Q ss_pred             HhccccCCCCCCCCCCCCCccEEecCCCCCCHHHHHHHHHHhcCCCCCccccCHHHHHHHHHHHHHHHHhhhhccccccC
Q 017760          131 SMGLLDDIPGQKGRPIASGQPYFVSDGFPINTFEFIGPLLKTLDYDLPKSWLAVPHALFLGKVFSFFYSVLYPWLNRWWL  210 (366)
Q Consensus       131 ~~~l~~~~~~~~~~~~~~g~~y~I~~~~~vs~~e~~~~l~~~lg~~~~~~~lp~~~~~~~a~~~e~~~~~~~~~~~~~~~  210 (366)
                      ++..         .....+++||+++++++|+.|+++.+.+.+|.+.+....|                           
T Consensus       238 ~~~~---------~~~~~~~~~ni~~~~~~s~~e~~~~i~~~~g~~~~~~~~~---------------------------  281 (330)
T 2c20_A          238 LKDL---------QNGGESDFYNLGNGNGFSVKEIVDAVREVTNHEIPAEVAP---------------------------  281 (330)
T ss_dssp             HHHH---------HTTCCCEEEECCCTTCBCHHHHHHHHHHHTTSCCCEEEEC---------------------------
T ss_pred             Hhcc---------ccCCCCCeEEeCCCCCccHHHHHHHHHHHhCCCCceeeCC---------------------------
Confidence            9731         0112468999999999999999999999999876543322                           


Q ss_pred             CCCCCcHHhhhhhcccceecHHHHHHhcCCCCCC-ChHHHHHHHHHHHHhccc
Q 017760          211 PQPLILPAEVYKVGVTHYFSLLKAKDELCYVPIV-SPREGMAATISYWQDRKR  262 (366)
Q Consensus       211 ~~p~l~~~ev~~~~~~~~~d~~ka~~~LG~~p~~-~~~e~l~~~v~~~~~~~~  262 (366)
                       ...-   +    .....+|++|++++|||+|++ +++++|+++++||+++..
T Consensus       282 -~~~~---~----~~~~~~d~~k~~~~lG~~p~~~~l~~~l~~~~~~~~~~~~  326 (330)
T 2c20_A          282 -RRAG---D----PARLVASSQKAKEKLGWDPRYVNVKTIIEHAWNWHQKQPN  326 (330)
T ss_dssp             -CCSS---C----CSEECBCCHHHHHHHCCCCSCCCHHHHHHHHHHHHHHCSS
T ss_pred             -CCCC---c----ccccccCHHHHHHHhCCCCccCCHHHHHHHHHHHHHHhhh
Confidence             1000   0    012468999999999999998 999999999999987654

>1rpn_A GDP-mannose 4,6-dehydratase; short-chain dehydrogenase/reductase, rossmann fold, lyase; HET: NDP GDP; 2.15A {Pseudomonas aeruginosa} SCOP: c.2.1.2

Probab=99.93  E-value=2e-25  Score=211.16  Aligned_cols=209  Identities=21%  Similarity=0.204  Sum_probs=153.0

Q ss_pred             ccCCeEEEEcCCChhHHHHHHHHHHcCCceEEEEecCCCCccc---ccc-cCCCeEEEEcc-------------------
Q 017760            9 IEGKTFLVTGGLGHVGSALCLELVRRGAYQVRAFDLRTNSPWS---HLL-INHGVHCIQGL-------------------   65 (366)
Q Consensus         9 ~~~~~VlITGgtGfiG~~L~~~L~~~g~~~V~~~dr~~~~~~~---~~~-~~~~v~~i~gD-------------------   65 (366)
                      .++++||||||+||+|+++++.|+++| ++|++++|++.....   ..+ ...+++++.+|                   
T Consensus        12 ~~~~~vlVTGatG~iG~~l~~~L~~~g-~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~Dl~d~~~~~~~~~~~~~d~V   90 (335)
T 1rpn_A           12 SMTRSALVTGITGQDGAYLAKLLLEKG-YRVHGLVARRSSDTRWRLRELGIEGDIQYEDGDMADACSVQRAVIKAQPQEV   90 (335)
T ss_dssp             ---CEEEEETTTSHHHHHHHHHHHHTT-CEEEEEECCCSSCCCHHHHHTTCGGGEEEEECCTTCHHHHHHHHHHHCCSEE
T ss_pred             ccCCeEEEECCCChHHHHHHHHHHHCC-CeEEEEeCCCccccccchhhccccCceEEEECCCCCHHHHHHHHHHcCCCEE
Confidence            456899999999999999999999999 599999998654211   111 12345666666                   


Q ss_pred             -------------------------------------c------------------------------------------
Q 017760           66 -------------------------------------R------------------------------------------   66 (366)
Q Consensus        66 -------------------------------------k------------------------------------------   66 (366)
                                                           .                                          
T Consensus        91 ih~A~~~~~~~~~~~~~~~~~~n~~~~~~l~~a~~~~~~~~~~v~~SS~~v~g~~~~~~~~E~~~~~p~~~Y~~sK~~~e  170 (335)
T 1rpn_A           91 YNLAAQSFVGASWNQPVTTGVVDGLGVTHLLEAIRQFSPETRFYQASTSEMFGLIQAERQDENTPFYPRSPYGVAKLYGH  170 (335)
T ss_dssp             EECCSCCCHHHHTTSHHHHHHHHTHHHHHHHHHHHHHCTTSEEEEEEEGGGGCSCSSSSBCTTSCCCCCSHHHHHHHHHH
T ss_pred             EECccccchhhhhhChHHHHHHHHHHHHHHHHHHHHhCCCCeEEEEeCHHHhCCCCCCCCCcccCCCCCChhHHHHHHHH
Confidence                                                 0                                          


Q ss_pred             -----cCCCCCceEEEEeCCccccCCCCC-C----HHHHHHHHHcCCC-CeeecCCCcceeceeHHHHHHHHHHHHhccc
Q 017760           67 -----KNNRKCLYTCAVRPAAIYGPGEER-H----LPRIVSLAKLGLV-PFKIGEPSVKTDWIYVDNLVLALILASMGLL  135 (366)
Q Consensus        67 -----s~~~~~l~~~ilRp~~iyGp~~~~-~----l~~~i~~~~~g~~-~~~~g~~~~~~~~v~vdDla~a~~~a~~~l~  135 (366)
                           .....+++++++||+++|||+... .    +..++..+.+|.. ...+|++++.++|+|++|+|++++.+++   
T Consensus       171 ~~~~~~~~~~~~~~~i~r~~~v~Gp~~~~~~~~~~~~~~~~~~~~g~~~~~~~g~g~~~~~~i~v~Dva~a~~~~~~---  247 (335)
T 1rpn_A          171 WITVNYRESFGLHASSGILFNHESPLRGIEFVTRKVTDAVARIKLGKQQELRLGNVDAKRDWGFAGDYVEAMWLMLQ---  247 (335)
T ss_dssp             HHHHHHHHHHCCCEEEEEECCEECTTSCTTSHHHHHHHHHHHHHTTSCSCEEESCTTCEEECEEHHHHHHHHHHHHH---
T ss_pred             HHHHHHHHHcCCcEEEEeeCcccCCCCCCCcchHHHHHHHHHHHcCCCceEEeCCCcceeceEEHHHHHHHHHHHHh---
Confidence                 011126789999999999998643 3    4556666667764 3457888999999999999999999997   


Q ss_pred             cCCCCCCCCCCCCCccEEecCCCCCCHHHHHHHHHHhcCCCCCc-cccCHHHHHHHHHHHHHHHHhhhhccccccCCCCC
Q 017760          136 DDIPGQKGRPIASGQPYFVSDGFPINTFEFIGPLLKTLDYDLPK-SWLAVPHALFLGKVFSFFYSVLYPWLNRWWLPQPL  214 (366)
Q Consensus       136 ~~~~~~~~~~~~~g~~y~I~~~~~vs~~e~~~~l~~~lg~~~~~-~~lp~~~~~~~a~~~e~~~~~~~~~~~~~~~~~p~  214 (366)
                              .+.  +++||+++++++|+.|+++.+.+.+|.+.+. ..+                            ..+.
T Consensus       248 --------~~~--~~~~ni~~~~~~s~~e~~~~i~~~~g~~~~~~~~~----------------------------~~~~  289 (335)
T 1rpn_A          248 --------QDK--ADDYVVATGVTTTVRDMCQIAFEHVGLDYRDFLKI----------------------------DPAF  289 (335)
T ss_dssp             --------SSS--CCCEEECCSCEEEHHHHHHHHHHTTTCCGGGTEEE----------------------------CGGG
T ss_pred             --------cCC--CCEEEEeCCCCccHHHHHHHHHHHhCCCccccccc----------------------------cccc
Confidence                    222  4799999999999999999999999975321 111                            0111


Q ss_pred             CcHHhhhhhcccceecHHHHHHhcCCCCCCChHHHHHHHHHHHHhcccc
Q 017760          215 ILPAEVYKVGVTHYFSLLKAKDELCYVPIVSPREGMAATISYWQDRKRK  263 (366)
Q Consensus       215 l~~~ev~~~~~~~~~d~~ka~~~LG~~p~~~~~e~l~~~v~~~~~~~~~  263 (366)
                      ..+.+    .....+|++|++++|||+|.++++++|+++++||+++.++
T Consensus       290 ~~~~~----~~~~~~d~~k~~~~lG~~p~~~l~e~l~~~~~~~~~~~~~  334 (335)
T 1rpn_A          290 FRPAE----VDVLLGNPAKAQRVLGWKPRTSLDELIRMMVEADLRRVSR  334 (335)
T ss_dssp             CCSSC----CCBCCBCTHHHHHHHCCCCCSCHHHHHHHHHHHHHHHHHH
T ss_pred             cCCCc----chhhcCCHHHHHHhcCCCcCCCHHHHHHHHHHHHHHhhcc
Confidence            11111    1223679999999999999999999999999999886543

>2c5a_A GDP-mannose-3', 5'-epimerase; short chain dehydratase/reductase, GDP-gulose, GDP-galactose, keto intermediate, vitamin C, SDR; HET: GDC NAD BTB; 1.4A {Arabidopsis thaliana} SCOP: c.2.1.2 PDB: 2c59_A* 2c54_A* 2c5e_A*

Probab=99.93  E-value=5.2e-25  Score=212.48  Aligned_cols=203  Identities=17%  Similarity=0.105  Sum_probs=159.5

Q ss_pred             ccCCeEEEEcCCChhHHHHHHHHHHcCCceEEEEecCCCCcccccccCCCeEEEEcc-----------------------
Q 017760            9 IEGKTFLVTGGLGHVGSALCLELVRRGAYQVRAFDLRTNSPWSHLLINHGVHCIQGL-----------------------   65 (366)
Q Consensus         9 ~~~~~VlITGgtGfiG~~L~~~L~~~g~~~V~~~dr~~~~~~~~~~~~~~v~~i~gD-----------------------   65 (366)
                      .+||+|+||||+||+|+++++.|+++| ++|++++|++....  .....+++++.+|                       
T Consensus        27 ~~~~~vlVtGatG~iG~~l~~~L~~~g-~~V~~~~r~~~~~~--~~~~~~v~~~~~Dl~d~~~~~~~~~~~d~Vih~A~~  103 (379)
T 2c5a_A           27 SENLKISITGAGGFIASHIARRLKHEG-HYVIASDWKKNEHM--TEDMFCDEFHLVDLRVMENCLKVTEGVDHVFNLAAD  103 (379)
T ss_dssp             TSCCEEEEETTTSHHHHHHHHHHHHTT-CEEEEEESSCCSSS--CGGGTCSEEEECCTTSHHHHHHHHTTCSEEEECCCC
T ss_pred             ccCCeEEEECCccHHHHHHHHHHHHCC-CeEEEEECCCccch--hhccCCceEEECCCCCHHHHHHHhCCCCEEEECcee
Confidence            356899999999999999999999999 59999999865432  1112355666666                       


Q ss_pred             -----------------------------------------------c-----------------c--------------
Q 017760           66 -----------------------------------------------R-----------------K--------------   67 (366)
Q Consensus        66 -----------------------------------------------k-----------------s--------------   67 (366)
                                                                     .                 .              
T Consensus       104 ~~~~~~~~~~~~~~~~~Nv~g~~~ll~a~~~~~~~~~V~~SS~~v~~~~~~~~~~~~~~~E~~~~~~~~~~~Y~~sK~~~  183 (379)
T 2c5a_A          104 MGGMGFIQSNHSVIMYNNTMISFNMIEAARINGIKRFFYASSACIYPEFKQLETTNVSLKESDAWPAEPQDAFGLEKLAT  183 (379)
T ss_dssp             CCCHHHHTTCHHHHHHHHHHHHHHHHHHHHHTTCSEEEEEEEGGGSCGGGSSSSSSCEECGGGGSSBCCSSHHHHHHHHH
T ss_pred             cCcccccccCHHHHHHHHHHHHHHHHHHHHHcCCCEEEEEeehheeCCCCCCCccCCCcCcccCCCCCCCChhHHHHHHH
Confidence                                                           0                 0              


Q ss_pred             -------CCCCCceEEEEeCCccccCCCCC------CHHHHHHHHHcCCC-CeeecCCCcceeceeHHHHHHHHHHHHhc
Q 017760           68 -------NNRKCLYTCAVRPAAIYGPGEER------HLPRIVSLAKLGLV-PFKIGEPSVKTDWIYVDNLVLALILASMG  133 (366)
Q Consensus        68 -------~~~~~l~~~ilRp~~iyGp~~~~------~l~~~i~~~~~g~~-~~~~g~~~~~~~~v~vdDla~a~~~a~~~  133 (366)
                             ....+++++++||+.+|||++..      .++.++..+.++.. +.+++++++.++|+|++|+|++++.+++ 
T Consensus       184 E~~~~~~~~~~gi~~~ilrp~~v~G~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~g~~~~~~i~v~Dva~ai~~~l~-  262 (379)
T 2c5a_A          184 EELCKHYNKDFGIECRIGRFHNIYGPFGTWKGGREKAPAAFCRKAQTSTDRFEMWGDGLQTRSFTFIDECVEGVLRLTK-  262 (379)
T ss_dssp             HHHHHHHHHHHCCEEEEEEECCEECTTSCCSSSCCCHHHHHHHHHHHCSSCEEEESCSCCEECCEEHHHHHHHHHHHHH-
T ss_pred             HHHHHHHHHHHCCCEEEEEeCceeCcCCCcccccccHHHHHHHHHHhCCCceEEeCCCCeeEEEEEHHHHHHHHHHHhh-
Confidence                   00125789999999999998643      56778888777765 5678898999999999999999999997 


Q ss_pred             cccCCCCCCCCCCCCCccEEecCCCCCCHHHHHHHHHHhcCCCCCccccCHHHHHHHHHHHHHHHHhhhhccccccCCCC
Q 017760          134 LLDDIPGQKGRPIASGQPYFVSDGFPINTFEFIGPLLKTLDYDLPKSWLAVPHALFLGKVFSFFYSVLYPWLNRWWLPQP  213 (366)
Q Consensus       134 l~~~~~~~~~~~~~~g~~y~I~~~~~vs~~e~~~~l~~~lg~~~~~~~lp~~~~~~~a~~~e~~~~~~~~~~~~~~~~~p  213 (366)
                                .+  .+++||+++++++|+.|+++.+.+.+|.+.+...+|                            .+
T Consensus       263 ----------~~--~~~~~ni~~~~~~s~~e~~~~i~~~~g~~~~~~~~p----------------------------~~  302 (379)
T 2c5a_A          263 ----------SD--FREPVNIGSDEMVSMNEMAEMVLSFEEKKLPIHHIP----------------------------GP  302 (379)
T ss_dssp             ----------SS--CCSCEEECCCCCEEHHHHHHHHHHTTTCCCCEEEEC----------------------------CC
T ss_pred             ----------cc--CCCeEEeCCCCccCHHHHHHHHHHHhCCCCceeeCC----------------------------CC
Confidence                      22  467999999999999999999999999876654433                            11


Q ss_pred             CCcHHhhhhhcccceecHHHHHHhcCCCCCCChHHHHHHHHHHHHhcccc
Q 017760          214 LILPAEVYKVGVTHYFSLLKAKDELCYVPIVSPREGMAATISYWQDRKRK  263 (366)
Q Consensus       214 ~l~~~ev~~~~~~~~~d~~ka~~~LG~~p~~~~~e~l~~~v~~~~~~~~~  263 (366)
                      .    .    .....+|++|++++|||+|+++++++|+++++||+++..+
T Consensus       303 ~----~----~~~~~~d~~k~~~~lG~~p~~~l~e~l~~~~~~~~~~~~~  344 (379)
T 2c5a_A          303 E----G----VRGRNSDNNLIKEKLGWAPNMRLKEGLRITYFWIKEQIEK  344 (379)
T ss_dssp             C----C----CSBCEECCHHHHHHHSCCCCCCHHHHHHHHHHHHHHHHHH
T ss_pred             C----C----cccccCCHHHHHHHhCCCCCCCHHHHHHHHHHHHHHhHhh
Confidence            1    0    1123689999999999999999999999999999876554

>2bll_A Protein YFBG; decarboxylase, short chain dehydrogenase, L-ARA4N biosynthes methyltransferase, transferase; 2.3A {Escherichia coli} SCOP: c.2.1.2 PDB: 1u9j_A 1z73_A 1z75_A 1z7b_A 1z74_A

Probab=99.93  E-value=2.8e-25  Score=210.68  Aligned_cols=160  Identities=13%  Similarity=0.051  Sum_probs=118.3

Q ss_pred             CceEEEEeCCccccCCCCC----------CHHHHHHHHHcCCCCeeecCCCcceeceeHHHHHHHHHHHHhccccCCCCC
Q 017760           72 CLYTCAVRPAAIYGPGEER----------HLPRIVSLAKLGLVPFKIGEPSVKTDWIYVDNLVLALILASMGLLDDIPGQ  141 (366)
Q Consensus        72 ~l~~~ilRp~~iyGp~~~~----------~l~~~i~~~~~g~~~~~~g~~~~~~~~v~vdDla~a~~~a~~~l~~~~~~~  141 (366)
                      +++++++||+.+|||+...          .++.++..+.+|..+.+++++++.++|+|++|+|++++.+++.        
T Consensus       167 ~~~~~ilrp~~v~G~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~i~v~Dva~a~~~~~~~--------  238 (345)
T 2bll_A          167 GLQFTLFRPFNWMGPRLDNLNAARIGSSRAITQLILNLVEGSPIKLIDGGKQKRCFTDIRDGIEALYRIIEN--------  238 (345)
T ss_dssp             CCCEEEEEECSEECSSCCCTTCSBSCBCHHHHHHHHHHHHTCCEEEGGGSCCEEECEEHHHHHHHHHHHHHC--------
T ss_pred             CCCEEEEcCCcccCCCcccccccccccccHHHHHHHHHHcCCCcEEECCCCEEEEEEEHHHHHHHHHHHHhh--------
Confidence            5789999999999998642          4677888888888777788888999999999999999999972        


Q ss_pred             CCCCC--CCCccEEecCCC-CCCHHHHHHHHHHhcCCCCCccccCHHHHHHHHHHHHHHHHhhhhccccccCCCCCCcHH
Q 017760          142 KGRPI--ASGQPYFVSDGF-PINTFEFIGPLLKTLDYDLPKSWLAVPHALFLGKVFSFFYSVLYPWLNRWWLPQPLILPA  218 (366)
Q Consensus       142 ~~~~~--~~g~~y~I~~~~-~vs~~e~~~~l~~~lg~~~~~~~lp~~~~~~~a~~~e~~~~~~~~~~~~~~~~~p~l~~~  218 (366)
                         +.  ..|++||+++++ ++|+.|+++.+.+.+|.+.+...+|.+......                  ...+.... 
T Consensus       239 ---~~~~~~g~~~~i~~~~~~~s~~e~~~~i~~~~g~~~~~~~~~~~~~~~~~------------------~~~~~~~~-  296 (345)
T 2bll_A          239 ---AGNRCDGEIINIGNPENEASIEELGEMLLASFEKHPLRHHFPPFAGFRVV------------------ESSSYYGK-  296 (345)
T ss_dssp             ---GGGTTTTEEEEECCTTSEEEHHHHHHHHHHHHHTCTTGGGSCCCCCEEEC---------------------------
T ss_pred             ---ccccCCCceEEeCCCCCCCCHHHHHHHHHHHhCCCcccccCccccccccc------------------cchhhccc-
Confidence               22  467899999986 899999999999999987654444321100000                  00000000 


Q ss_pred             hhhhhcccceecHHHHHHhcCCCCCCChHHHHHHHHHHHHhccc
Q 017760          219 EVYKVGVTHYFSLLKAKDELCYVPIVSPREGMAATISYWQDRKR  262 (366)
Q Consensus       219 ev~~~~~~~~~d~~ka~~~LG~~p~~~~~e~l~~~v~~~~~~~~  262 (366)
                      . .....+..+|++|++++|||+|+++++++|+++++||+++..
T Consensus       297 ~-~~~~~~~~~d~~k~~~~lG~~p~~~l~~~l~~~~~~~~~~~~  339 (345)
T 2bll_A          297 G-YQDVEHRKPSIRNAHRCLDWEPKIDMQETIDETLDFFLRTVD  339 (345)
T ss_dssp             -----CCCCCBCCHHHHHHHCCCCCCCHHHHHHHHHHHHHHHSC
T ss_pred             c-ccchhhhcccHHHHHHhcCCCccccHHHHHHHHHHHHHHcCC
Confidence            0 001123468999999999999999999999999999987643

>4b8w_A GDP-L-fucose synthase; oxidoreductase; HET: NAP GDP; 2.75A {Homo sapiens}

Probab=99.93  E-value=7.7e-26  Score=211.41  Aligned_cols=148  Identities=14%  Similarity=0.134  Sum_probs=120.0

Q ss_pred             CCceEEEEeCCccccCCCC------CCHHHHHHH----HHcCCCCeeecCCCcceeceeHHHHHHHHHHHHhccccCCCC
Q 017760           71 KCLYTCAVRPAAIYGPGEE------RHLPRIVSL----AKLGLVPFKIGEPSVKTDWIYVDNLVLALILASMGLLDDIPG  140 (366)
Q Consensus        71 ~~l~~~ilRp~~iyGp~~~------~~l~~~i~~----~~~g~~~~~~g~~~~~~~~v~vdDla~a~~~a~~~l~~~~~~  140 (366)
                      .+++++++||+++|||++.      ..++.++..    +..|..+.++|++++.++|+|++|+|++++.+++.       
T Consensus       160 ~~~~~~ilRp~~v~Gp~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~i~v~Dva~a~~~~~~~-------  232 (319)
T 4b8w_A          160 YGCTFTAVIPTNVFGPHDNFNIEDGHVLPGLIHKVHLAKSSGSALTVWGTGNPRRQFIYSLDLAQLFIWVLRE-------  232 (319)
T ss_dssp             HCCEEEEEEECEEECTTCCCCTTTSCHHHHHHHHHHHHHHHTCCEEEESCSCCEECEEEHHHHHHHHHHHHHH-------
T ss_pred             hCCCEEEEeeccccCCCCCCCCccccccHHHHHHHHHHhccCCceEEeCCCCeeEEEEeHHHHHHHHHHHHhc-------
Confidence            4788999999999999874      345666666    78888888889999999999999999999999974       


Q ss_pred             CCCCCCCCCccEEecCCCCCCHHHHHHHHHHhcCCCCCccccCHHHHHHHHHHHHHHHHhhhhccccccCCCCCCcHHhh
Q 017760          141 QKGRPIASGQPYFVSDGFPINTFEFIGPLLKTLDYDLPKSWLAVPHALFLGKVFSFFYSVLYPWLNRWWLPQPLILPAEV  220 (366)
Q Consensus       141 ~~~~~~~~g~~y~I~~~~~vs~~e~~~~l~~~lg~~~~~~~lp~~~~~~~a~~~e~~~~~~~~~~~~~~~~~p~l~~~ev  220 (366)
                         .+...+++||+++++++|+.|+++.+.+.+|.+.+....|                            .+..   + 
T Consensus       233 ---~~~~~~~~~ni~~~~~~s~~e~~~~i~~~~g~~~~~~~~~----------------------------~~~~---~-  277 (319)
T 4b8w_A          233 ---YNEVEPIILSVGEEDEVSIKEAAEAVVEAMDFHGEVTFDT----------------------------TKSD---G-  277 (319)
T ss_dssp             ---CCCSSCEEECCCGGGCEEHHHHHHHHHHHTTCCSCEEEET----------------------------TSCC---C-
T ss_pred             ---cccCCceEEEecCCCceeHHHHHHHHHHHhCCCCcEEeCC----------------------------CCCc---C-
Confidence               2345578999999999999999999999999876543221                            1100   0 


Q ss_pred             hhhcccceecHHHHHHhcCCCCCCChHHHHHHHHHHHHhcccc
Q 017760          221 YKVGVTHYFSLLKAKDELCYVPIVSPREGMAATISYWQDRKRK  263 (366)
Q Consensus       221 ~~~~~~~~~d~~ka~~~LG~~p~~~~~e~l~~~v~~~~~~~~~  263 (366)
                         .....+|++|++++|||+|.++++++|+++++||+++..+
T Consensus       278 ---~~~~~~d~~k~~~~lg~~p~~~~~~~l~~~~~~~~~~~~~  317 (319)
T 4b8w_A          278 ---QFKKTASNSKLRTYLPDFRFTPFKQAVKETCAWFTDNYEQ  317 (319)
T ss_dssp             ---CSCCCBCCHHHHHHCTTCCCCCHHHHHHHHHHHHHHSCSS
T ss_pred             ---cccccCCHHHHHHhcCCCCCCCHHHHHHHHHHHHHHHHhh
Confidence               1123689999999999999999999999999999886543

>2v6g_A Progesterone 5-beta-reductase; tyrosine-dependent oxidoreductase, oxidoreductase, SDR, cardenolides, cardiac glycosides; HET: NAP; 2.3A {Digitalis lanata} PDB: 2v6f_A*

Probab=99.93  E-value=2.6e-25  Score=212.65  Aligned_cols=171  Identities=16%  Similarity=0.098  Sum_probs=122.7

Q ss_pred             ceEEEEeCCccccCCCCCC----HHH-HHHHH--HcCCCCeeecCC---CcceeceeHHHHHHHHHHHHhccccCCCCCC
Q 017760           73 LYTCAVRPAAIYGPGEERH----LPR-IVSLA--KLGLVPFKIGEP---SVKTDWIYVDNLVLALILASMGLLDDIPGQK  142 (366)
Q Consensus        73 l~~~ilRp~~iyGp~~~~~----l~~-~i~~~--~~g~~~~~~g~~---~~~~~~v~vdDla~a~~~a~~~l~~~~~~~~  142 (366)
                      ++++++||+.+|||++...    .+. +...+  .+|..+.++|++   ....+++|++|+|++++.+++          
T Consensus       171 ~~~~ilRp~~v~G~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~g~~~~~~~~~~~~~v~Dva~a~~~~~~----------  240 (364)
T 2v6g_A          171 LTWSVHRPGNIFGFSPYSMMNLVGTLCVYAAICKHEGKVLRFTGCKAAWDGYSDCSDADLIAEHHIWAAV----------  240 (364)
T ss_dssp             CEEEEEEESSEECCCTTCSSCHHHHHHHHHHHHHHHTCCBCCCSCHHHHHSCBCCEEHHHHHHHHHHHHH----------
T ss_pred             ceEEEECCCceeCCCCCcccchHHHHHHHHHHHHhcCCceecCCCcccccccCCCCcHHHHHHHHHHHHh----------
Confidence            8999999999999987532    233 34444  467766667777   345788899999999999997          


Q ss_pred             CCCCCCCccEEecCCCCCCHHHHHHHHHHhcCCCCCcc--ccCHHHHHHHHHHHHHHHHhhhhccccccCCCCCCcHHhh
Q 017760          143 GRPIASGQPYFVSDGFPINTFEFIGPLLKTLDYDLPKS--WLAVPHALFLGKVFSFFYSVLYPWLNRWWLPQPLILPAEV  220 (366)
Q Consensus       143 ~~~~~~g~~y~I~~~~~vs~~e~~~~l~~~lg~~~~~~--~lp~~~~~~~a~~~e~~~~~~~~~~~~~~~~~p~l~~~ev  220 (366)
                       .+...|++||+++++++|+.|+++.+++.+|.+.+..  .+|.++...++...+.+..+.... +    ..+. ...+.
T Consensus       241 -~~~~~g~~~ni~~~~~~s~~e~~~~i~~~~g~~~~~~~~~~p~~~~~~~~~~~~~~~~~~~~~-~----~~~~-~~~~~  313 (364)
T 2v6g_A          241 -DPYAKNEAFNVSNGDVFKWKHFWKVLAEQFGVECGEYEEGVDLKLQDLMKGKEPVWEEIVREN-G----LTPT-KLKDV  313 (364)
T ss_dssp             -CGGGTTEEEEECCSCCBCHHHHHHHHHHHHTCCBCCCCTTCCCCHHHHTTTCHHHHHHHHHHT-T----CCCC-CHHHH
T ss_pred             -CCCCCCceEEecCCCcCCHHHHHHHHHHHhCCCCCCCCCCCCccHHHHHhhhHHHHHHHHHHh-C----CCcc-ccccc
Confidence             3344688999999999999999999999999887665  788777776665333322222100 0    0110 00011


Q ss_pred             -------hhhccc-ceecHHHHHHhcCCCCCCChHHHHHHHHHHHHhcc
Q 017760          221 -------YKVGVT-HYFSLLKAKDELCYVPIVSPREGMAATISYWQDRK  261 (366)
Q Consensus       221 -------~~~~~~-~~~d~~ka~~~LG~~p~~~~~e~l~~~v~~~~~~~  261 (366)
                             ...+.+ ..+|++|+++ |||+|.++++++++++++||++++
T Consensus       314 ~~~~~~~~~~~~~~~~~d~~k~~~-lG~~p~~~~~e~l~~~~~~~~~~g  361 (364)
T 2v6g_A          314 GIWWFGDVILGNECFLDSMNKSKE-HGFLGFRNSKNAFISWIDKAKAYK  361 (364)
T ss_dssp             CCHHHHHHHHTSCCCCBCCHHHHH-TTCCCCCCHHHHHHHHHHHHHHTT
T ss_pred             cccchhhhccccchhhcchHHHHh-cCCCCCCCHHHHHHHHHHHHHHcC
Confidence                   011244 4789999988 999999999999999999998765

>2pk3_A GDP-6-deoxy-D-LYXO-4-hexulose reductase; SDR, short-chain dehydrogenase/reductase, rossmann fold, oxidoreductase; HET: A2R GDD; 1.82A {Aneurinibacillus thermoaerophilus}

Probab=99.93  E-value=6.1e-25  Score=206.60  Aligned_cols=200  Identities=18%  Similarity=0.159  Sum_probs=153.2

Q ss_pred             ccCCeEEEEcCCChhHHHHHHHHHHcCCceEEEEecCCCCcccccccCCCeEEEEcc-----------------------
Q 017760            9 IEGKTFLVTGGLGHVGSALCLELVRRGAYQVRAFDLRTNSPWSHLLINHGVHCIQGL-----------------------   65 (366)
Q Consensus         9 ~~~~~VlITGgtGfiG~~L~~~L~~~g~~~V~~~dr~~~~~~~~~~~~~~v~~i~gD-----------------------   65 (366)
                      .++++|+||||+||+|+++++.|+++| ++|++++|++....   +   +++++.+|                       
T Consensus        10 ~~~~~vlVTGatG~iG~~l~~~L~~~G-~~V~~~~r~~~~~~---l---~~~~~~~Dl~d~~~~~~~~~~~~~d~vih~A   82 (321)
T 2pk3_A           10 HGSMRALITGVAGFVGKYLANHLTEQN-VEVFGTSRNNEAKL---P---NVEMISLDIMDSQRVKKVISDIKPDYIFHLA   82 (321)
T ss_dssp             ---CEEEEETTTSHHHHHHHHHHHHTT-CEEEEEESCTTCCC---T---TEEEEECCTTCHHHHHHHHHHHCCSEEEECC
T ss_pred             cCcceEEEECCCChHHHHHHHHHHHCC-CEEEEEecCCcccc---c---eeeEEECCCCCHHHHHHHHHhcCCCEEEEcC
Confidence            456899999999999999999999999 59999998865311   1   34455554                       


Q ss_pred             --------------------------------------------------c-------------c---------------
Q 017760           66 --------------------------------------------------R-------------K---------------   67 (366)
Q Consensus        66 --------------------------------------------------k-------------s---------------   67 (366)
                                                                        .             .               
T Consensus        83 ~~~~~~~~~~~~~~~~~~Nv~g~~~l~~a~~~~~~~~~iv~~SS~~v~g~~~~~~~~~~E~~~~~~~~~Y~~sK~~~E~~  162 (321)
T 2pk3_A           83 AKSSVKDSWLNKKGTFSTNVFGTLHVLDAVRDSNLDCRILTIGSSEEYGMILPEESPVSEENQLRPMSPYGVSKASVGML  162 (321)
T ss_dssp             SCCCHHHHTTCHHHHHHHHHHHHHHHHHHHHHHTCCCEEEEEEEGGGTBSCCGGGCSBCTTSCCBCCSHHHHHHHHHHHH
T ss_pred             cccchhhhhhcHHHHHHHHHHHHHHHHHHHHHhCCCCeEEEEccHHhcCCCCCCCCCCCCCCCCCCCCccHHHHHHHHHH
Confidence                                                              0             0               


Q ss_pred             ----CCCCCceEEEEeCCccccCCCCC--CHHHHHHHHHc---C--CCCeeecCCCcceeceeHHHHHHHHHHHHhcccc
Q 017760           68 ----NNRKCLYTCAVRPAAIYGPGEER--HLPRIVSLAKL---G--LVPFKIGEPSVKTDWIYVDNLVLALILASMGLLD  136 (366)
Q Consensus        68 ----~~~~~l~~~ilRp~~iyGp~~~~--~l~~~i~~~~~---g--~~~~~~g~~~~~~~~v~vdDla~a~~~a~~~l~~  136 (366)
                          ..+.+++++++||+++|||+...  .++.++..+.+   |  ..+..+++++..++++|++|+|++++.+++.   
T Consensus       163 ~~~~~~~~gi~~~ilrp~~v~g~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~v~v~Dva~a~~~~~~~---  239 (321)
T 2pk3_A          163 ARQYVKAYGMDIIHTRTFNHIGPGQSLGFVTQDFAKQIVDIEMEKQEPIIKVGNLEAVRDFTDVRDIVQAYWLLSQY---  239 (321)
T ss_dssp             HHHHHHHHCCEEEEEEECEEECTTCCTTSHHHHHHHHHHHHHTTSSCSEEEESCSSCEEEEEEHHHHHHHHHHHHHH---
T ss_pred             HHHHHHHcCCCEEEEEeCcccCcCCCCCchHHHHHHHHHHHhcCCCCCeEEeCCCCcEEeeEEHHHHHHHHHHHHhC---
Confidence                11126789999999999998753  46677776666   7  4566788888999999999999999999973   


Q ss_pred             CCCCCCCCCCCCCccEEecCCCCCCHHHHHHHHHHhcCCCCCccccCHHHHHHHHHHHHHHHHhhhhccccccCCCCCCc
Q 017760          137 DIPGQKGRPIASGQPYFVSDGFPINTFEFIGPLLKTLDYDLPKSWLAVPHALFLGKVFSFFYSVLYPWLNRWWLPQPLIL  216 (366)
Q Consensus       137 ~~~~~~~~~~~~g~~y~I~~~~~vs~~e~~~~l~~~lg~~~~~~~lp~~~~~~~a~~~e~~~~~~~~~~~~~~~~~p~l~  216 (366)
                              + ..|++||+++++++|+.|+++.+.+.+|.+.+....|..                             ..
T Consensus       240 --------~-~~g~~~~i~~~~~~s~~e~~~~i~~~~g~~~~~~~~p~~-----------------------------~~  281 (321)
T 2pk3_A          240 --------G-KTGDVYNVCSGIGTRIQDVLDLLLAMANVKIDTELNPLQ-----------------------------LR  281 (321)
T ss_dssp             --------C-CTTCEEEESCSCEEEHHHHHHHHHHHSSSCCEEEECGGG-----------------------------CC
T ss_pred             --------C-CCCCeEEeCCCCCeeHHHHHHHHHHHhCCCCceeecccc-----------------------------CC
Confidence                    2 457899999999999999999999999987554333210                             01


Q ss_pred             HHhhhhhcccceecHHHHHHhcCCCCCCChHHHHHHHHHHHHhc
Q 017760          217 PAEVYKVGVTHYFSLLKAKDELCYVPIVSPREGMAATISYWQDR  260 (366)
Q Consensus       217 ~~ev~~~~~~~~~d~~ka~~~LG~~p~~~~~e~l~~~v~~~~~~  260 (366)
                      +.+    .....+|++|++++|||+|+++++++|+++++||+++
T Consensus       282 ~~~----~~~~~~d~~k~~~~lG~~p~~~~~e~l~~~~~~~~~~  321 (321)
T 2pk3_A          282 PSE----VPTLIGSNKRLKDSTGWKPRIPLEKSLFEILQSYRQA  321 (321)
T ss_dssp             SSC----CSBCCBCCHHHHHHHCCCCCSCHHHHHHHHHHHHHTC
T ss_pred             Ccc----cchhccCHHHHHHHcCCCcCCCHHHHHHHHHHHHhcC
Confidence            111    1234689999999999999999999999999999753

>2q1s_A Putative nucleotide sugar epimerase/ dehydratase; rossman fold, protein-NADH complex, sugar binding protein; HET: NAI; 1.50A {Bordetella bronchiseptica} PDB: 2pzj_A* 2q1t_A* 2q1u_A*

Probab=99.92  E-value=1.1e-24  Score=210.07  Aligned_cols=204  Identities=22%  Similarity=0.256  Sum_probs=159.3

Q ss_pred             ccCCeEEEEcCCChhHHHHHHHHHHcC-CceEEEEecCCCCccccccc-CCCeEEEEcc---------------------
Q 017760            9 IEGKTFLVTGGLGHVGSALCLELVRRG-AYQVRAFDLRTNSPWSHLLI-NHGVHCIQGL---------------------   65 (366)
Q Consensus         9 ~~~~~VlITGgtGfiG~~L~~~L~~~g-~~~V~~~dr~~~~~~~~~~~-~~~v~~i~gD---------------------   65 (366)
                      +++|+|+||||+||+|+++++.|+++| + +|++++|+..... ..+. .++++++.+|                     
T Consensus        30 ~~~~~ilVtGatG~iG~~l~~~L~~~g~~-~V~~~~r~~~~~~-~~l~~~~~v~~~~~Dl~d~~~l~~~~~~~d~Vih~A  107 (377)
T 2q1s_A           30 LANTNVMVVGGAGFVGSNLVKRLLELGVN-QVHVVDNLLSAEK-INVPDHPAVRFSETSITDDALLASLQDEYDYVFHLA  107 (377)
T ss_dssp             GTTCEEEEETTTSHHHHHHHHHHHHTTCS-EEEEECCCTTCCG-GGSCCCTTEEEECSCTTCHHHHHHCCSCCSEEEECC
T ss_pred             hCCCEEEEECCccHHHHHHHHHHHHcCCc-eEEEEECCCCCch-hhccCCCceEEEECCCCCHHHHHHHhhCCCEEEECC
Confidence            456899999999999999999999999 7 8999998765421 1111 3456666666                     


Q ss_pred             --------------------------------c-c---------------------C--CC-------------------
Q 017760           66 --------------------------------R-K---------------------N--NR-------------------   70 (366)
Q Consensus        66 --------------------------------k-s---------------------~--~~-------------------   70 (366)
                                                      . .                     .  +.                   
T Consensus       108 ~~~~~~~~~~~~~~~~~~nv~~~~~ll~a~~~~~~~~~~V~~SS~~vyg~~~~~~~~~~E~~~~~~~~~~~~~Y~~sK~~  187 (377)
T 2q1s_A          108 TYHGNQSSIHDPLADHENNTLTTLKLYERLKHFKRLKKVVYSAAGCSIAEKTFDDAKATEETDIVSLHNNDSPYSMSKIF  187 (377)
T ss_dssp             CCSCHHHHHHCHHHHHHHHTHHHHHHHHHHTTCSSCCEEEEEEEC--------------CCCCCCCSSCCCSHHHHHHHH
T ss_pred             CccCchhhhhCHHHHHHHHHHHHHHHHHHHHHhCCCCeEEEeCCHHHcCCCCCCCcCcccccccccccCCCCchHHHHHH
Confidence                                            0 0                     0  11                   


Q ss_pred             -----------CCceEEEEeCCccccCCC---------------CCCHHHHHHHHHcCCCCeeecCCCcceeceeHHHHH
Q 017760           71 -----------KCLYTCAVRPAAIYGPGE---------------ERHLPRIVSLAKLGLVPFKIGEPSVKTDWIYVDNLV  124 (366)
Q Consensus        71 -----------~~l~~~ilRp~~iyGp~~---------------~~~l~~~i~~~~~g~~~~~~g~~~~~~~~v~vdDla  124 (366)
                                 .+++++++||+.+|||+.               ...++.++..+.+|..+.+++++++.++|+|++|+|
T Consensus       188 ~E~~~~~~~~~~gi~~~ilRp~~v~G~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~g~g~~~~~~i~v~Dva  267 (377)
T 2q1s_A          188 GEFYSVYYHKQHQLPTVRARFQNVYGPGEILGAGRWRGTPATVWRNVTPTFIYKALKGMPLPLENGGVATRDFIFVEDVA  267 (377)
T ss_dssp             HHHHHHHHHHHHCCCEEEEEECCEECTTCCTTCSSCCSSGGGTSCSHHHHHHHHHHTTCCCCCSGGGCCEECCEEHHHHH
T ss_pred             HHHHHHHHHHHhCCCEEEEeeccEECCCCcccccccccCcccccccHHHHHHHHHHcCCCeEEeCCCCeEEeeEEHHHHH
Confidence                       145799999999999987               345788888888888777788889999999999999


Q ss_pred             HH-HHHHHhccccCCCCCCCCCCCCCccEEecCCCCCCHHHHHHHHHHhcCCCCCccccCHHHHHHHHHHHHHHHHhhhh
Q 017760          125 LA-LILASMGLLDDIPGQKGRPIASGQPYFVSDGFPINTFEFIGPLLKTLDYDLPKSWLAVPHALFLGKVFSFFYSVLYP  203 (366)
Q Consensus       125 ~a-~~~a~~~l~~~~~~~~~~~~~~g~~y~I~~~~~vs~~e~~~~l~~~lg~~~~~~~lp~~~~~~~a~~~e~~~~~~~~  203 (366)
                      ++ ++.+++           .+. .| +||+++++++|+.|+++.+.+.+|.+.+....|                    
T Consensus       268 ~a~i~~~~~-----------~~~-~g-~~~i~~~~~~s~~e~~~~i~~~~g~~~~~~~~p--------------------  314 (377)
T 2q1s_A          268 NGLIACAAD-----------GTP-GG-VYNIASGKETSIADLATKINEITGNNTELDRLP--------------------  314 (377)
T ss_dssp             HHHHHHHHH-----------CCT-TE-EEECCCCCCEEHHHHHHHHHHHHTCCSCCCCCC--------------------
T ss_pred             HHHHHHHHh-----------cCC-CC-eEEecCCCceeHHHHHHHHHHHhCCCCCceeCC--------------------
Confidence            99 999987           322 56 999999999999999999999999875543322                    


Q ss_pred             ccccccCCCCCCcHHhhhhhcccceecHHHHHHhcCCCCCCChHHHHHHHHHHHHhcc
Q 017760          204 WLNRWWLPQPLILPAEVYKVGVTHYFSLLKAKDELCYVPIVSPREGMAATISYWQDRK  261 (366)
Q Consensus       204 ~~~~~~~~~p~l~~~ev~~~~~~~~~d~~ka~~~LG~~p~~~~~e~l~~~v~~~~~~~  261 (366)
                              .   .+.+..   ....+|++|++++|||+|.++++++|+++++||+++.
T Consensus       315 --------~---~~~~~~---~~~~~d~~k~~~~lG~~p~~~l~e~l~~~~~~~~~~~  358 (377)
T 2q1s_A          315 --------K---RPWDNS---GKRFGSPEKARRELGFSADVSIDDGLRKTIEWTKANL  358 (377)
T ss_dssp             --------C---CGGGCC----CCCCCCHHHHHHHCCCCCCCHHHHHHHHHHHHHHTH
T ss_pred             --------C---Cccccc---cccccCHHHHHHHcCCCCCCCHHHHHHHHHHHHHHhh
Confidence                    0   111110   1346899999999999999999999999999998753

>1rkx_A CDP-glucose-4,6-dehydratase; SDR, lyase; HET: NAD; 1.80A {Yersinia pseudotuberculosis} SCOP: c.2.1.2 PDB: 1wvg_A*

Probab=99.92  E-value=4.7e-25  Score=210.67  Aligned_cols=213  Identities=18%  Similarity=0.191  Sum_probs=157.8

Q ss_pred             cccCCeEEEEcCCChhHHHHHHHHHHcCCceEEEEecCCCCcccc--cc-cCCCeEEEEcc-------------------
Q 017760            8 GIEGKTFLVTGGLGHVGSALCLELVRRGAYQVRAFDLRTNSPWSH--LL-INHGVHCIQGL-------------------   65 (366)
Q Consensus         8 ~~~~~~VlITGgtGfiG~~L~~~L~~~g~~~V~~~dr~~~~~~~~--~~-~~~~v~~i~gD-------------------   65 (366)
                      .+++|+|+||||+||+|+++++.|+++| ++|++++|++......  .. ...+++++++|                   
T Consensus         6 ~~~~~~vlVtGatG~iG~~l~~~L~~~g-~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~Dl~d~~~~~~~~~~~~~d~v   84 (357)
T 1rkx_A            6 FWQGKRVFVTGHTGFKGGWLSLWLQTMG-ATVKGYSLTAPTVPSLFETARVADGMQSEIGDIRDQNKLLESIREFQPEIV   84 (357)
T ss_dssp             HHTTCEEEEETTTSHHHHHHHHHHHHTT-CEEEEEESSCSSSSCHHHHTTTTTTSEEEECCTTCHHHHHHHHHHHCCSEE
T ss_pred             hhCCCEEEEECCCchHHHHHHHHHHhCC-CeEEEEeCCCcccchhhHhhccCCceEEEEccccCHHHHHHHHHhcCCCEE
Confidence            4567899999999999999999999999 5999999976432110  00 12355666666                   


Q ss_pred             ----------------------------------------------------------------------------cc--
Q 017760           66 ----------------------------------------------------------------------------RK--   67 (366)
Q Consensus        66 ----------------------------------------------------------------------------ks--   67 (366)
                                                                                                  |.  
T Consensus        85 ih~A~~~~~~~~~~~~~~~~~~n~~~~~~l~~a~~~~~~~~~~v~~SS~~vyg~~~~~~~~~E~~~~~~~~~Y~~sK~~~  164 (357)
T 1rkx_A           85 FHMAAQPLVRLSYSEPVETYSTNVMGTVYLLEAIRHVGGVKAVVNITSDKCYDNKEWIWGYRENEAMGGYDPYSNSKGCA  164 (357)
T ss_dssp             EECCSCCCHHHHHHCHHHHHHHHTHHHHHHHHHHHHHCCCCEEEEECCGGGBCCCCSSSCBCTTSCBCCSSHHHHHHHHH
T ss_pred             EECCCCcccccchhCHHHHHHHHHHHHHHHHHHHHHhCCCCeEEEecCHHHhCCCCcCCCCCCCCCCCCCCccHHHHHHH
Confidence                                                                                        00  


Q ss_pred             -------CC---------CCCceEEEEeCCccccCCCC---CCHHHHHHHHHcCCCCeeecCCCcceeceeHHHHHHHHH
Q 017760           68 -------NN---------RKCLYTCAVRPAAIYGPGEE---RHLPRIVSLAKLGLVPFKIGEPSVKTDWIYVDNLVLALI  128 (366)
Q Consensus        68 -------~~---------~~~l~~~ilRp~~iyGp~~~---~~l~~~i~~~~~g~~~~~~g~~~~~~~~v~vdDla~a~~  128 (366)
                             ..         ..+++++++||+.+|||++.   ..++.++..+.+|..+. +++++..++|+|++|+|++++
T Consensus       165 e~~~~~~~~~~~~~~~~~~~gi~~~~lrp~~v~G~~~~~~~~~~~~~~~~~~~g~~~~-~~~~~~~~~~v~v~Dva~a~~  243 (357)
T 1rkx_A          165 ELVTSSYRNSFFNPANYGQHGTAVATVRAGNVIGGGDWALDRIVPDILRAFEQSQPVI-IRNPHAIRPWQHVLEPLSGYL  243 (357)
T ss_dssp             HHHHHHHHHHHSCGGGHHHHCCEEEEEECCCEECTTCCCSSCHHHHHHHHHHTTCCEE-CSCTTCEECCEETHHHHHHHH
T ss_pred             HHHHHHHHHHHhhhhccccCCceEEEEeeceeeCCCCCccccHHHHHHHHHhcCCCEE-ECCCCCeeccEeHHHHHHHHH
Confidence                   00         12788999999999999873   56788888888888644 556778899999999999999


Q ss_pred             HHHhccccCCCCCCCCCCCCCccEEecCC--CCCCHHHHHHHHHHhcCCCCCccccCHHHHHHHHHHHHHHHHhhhhccc
Q 017760          129 LASMGLLDDIPGQKGRPIASGQPYFVSDG--FPINTFEFIGPLLKTLDYDLPKSWLAVPHALFLGKVFSFFYSVLYPWLN  206 (366)
Q Consensus       129 ~a~~~l~~~~~~~~~~~~~~g~~y~I~~~--~~vs~~e~~~~l~~~lg~~~~~~~lp~~~~~~~a~~~e~~~~~~~~~~~  206 (366)
                      .+++...+       .+...+++||++++  +++|+.|+++.+.+.+|.+.+.. .+.                      
T Consensus       244 ~~~~~~~~-------~~~~~~~~~ni~~~~~~~~s~~e~~~~i~~~~g~~~~~~-~~~----------------------  293 (357)
T 1rkx_A          244 LLAQKLYT-------DGAEYAEGWNFGPNDADATPVKNIVEQMVKYWGEGASWQ-LDG----------------------  293 (357)
T ss_dssp             HHHHHHHH-------TCGGGCSEEECCCCGGGCEEHHHHHHHHHHHHCTTCCEE-C------------------------
T ss_pred             HHHHhhhh-------cCCCCCceEEECCCCCCcccHHHHHHHHHHHhCCCCccc-cCC----------------------
Confidence            99863111       11245789999974  68999999999999999775432 110                      


Q ss_pred             cccCCCCCCcHHhhhhhcccceecHHHHHHhcCCCCCCChHHHHHHHHHHHHhcccc
Q 017760          207 RWWLPQPLILPAEVYKVGVTHYFSLLKAKDELCYVPIVSPREGMAATISYWQDRKRK  263 (366)
Q Consensus       207 ~~~~~~p~l~~~ev~~~~~~~~~d~~ka~~~LG~~p~~~~~e~l~~~v~~~~~~~~~  263 (366)
                           .+  .+.+    .....+|++|++++|||+|.++++++|+++++||+++...
T Consensus       294 -----~~--~~~~----~~~~~~d~~k~~~~lG~~p~~~l~e~l~~~~~~~~~~~~~  339 (357)
T 1rkx_A          294 -----NA--HPHE----AHYLKLDCSKAKMQLGWHPRWNLNTTLEYIVGWHKNWLSG  339 (357)
T ss_dssp             ------------C----CCCCCBCCHHHHHHHCCCCCCCHHHHHHHHHHHHHHHHTT
T ss_pred             -----CC--CCcC----cccccCCHHHHHHHhCCCcCCcHHHHHHHHHHHHHHHhcC
Confidence                 00  0111    1234689999999999999999999999999999876543

>2p5y_A UDP-glucose 4-epimerase; TTHA0591, structural genomics, PSI; HET: NAD; 1.92A {Thermus thermophilus HB8} PDB: 2p5u_A*

Probab=99.92  E-value=5.9e-25  Score=206.06  Aligned_cols=139  Identities=20%  Similarity=0.222  Sum_probs=113.2

Q ss_pred             CceEEEEeCCccccCCCCC-----CHHHHHHHHHcCCCCeee-----cCCCcceeceeHHHHHHHHHHHHhccccCCCCC
Q 017760           72 CLYTCAVRPAAIYGPGEER-----HLPRIVSLAKLGLVPFKI-----GEPSVKTDWIYVDNLVLALILASMGLLDDIPGQ  141 (366)
Q Consensus        72 ~l~~~ilRp~~iyGp~~~~-----~l~~~i~~~~~g~~~~~~-----g~~~~~~~~v~vdDla~a~~~a~~~l~~~~~~~  141 (366)
                      +++++++||+++|||++..     .++.++..+.+|..+.++     |++++.++|+|++|+|++++.+++         
T Consensus       162 ~~~~~~lrp~~v~Gp~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~i~v~Dva~a~~~~~~---------  232 (311)
T 2p5y_A          162 GLKWVSLRYGNVYGPRQDPHGEAGVVAIFAERVLKGLPVTLYARKTPGDEGCVRDYVYVGDVAEAHALALF---------  232 (311)
T ss_dssp             CCCEEEEEECEEECTTCCSSSTTHHHHHHHHHHHHTCCEEEECSSSTTSCCCEECEEEHHHHHHHHHHHHH---------
T ss_pred             CCCEEEEeeccccCcCCCCCCcCcHHHHHHHHHHcCCCcEEEecccCCCCCeEEeeEEHHHHHHHHHHHHh---------
Confidence            5789999999999998642     366777777788876667     888899999999999999999996         


Q ss_pred             CCCCCCCCccEEecCCCCCCHHHHHHHHHHhcCCCCCccccCHHHHHHHHHHHHHHHHhhhhccccccCCCCCCcHHhhh
Q 017760          142 KGRPIASGQPYFVSDGFPINTFEFIGPLLKTLDYDLPKSWLAVPHALFLGKVFSFFYSVLYPWLNRWWLPQPLILPAEVY  221 (366)
Q Consensus       142 ~~~~~~~g~~y~I~~~~~vs~~e~~~~l~~~lg~~~~~~~lp~~~~~~~a~~~e~~~~~~~~~~~~~~~~~p~l~~~ev~  221 (366)
                        .+   +++||+++++++|+.|+++.+.+.+|.+.+....|                            .+   +.+. 
T Consensus       233 --~~---~~~~~i~~~~~~s~~e~~~~i~~~~g~~~~~~~~~----------------------------~~---~~~~-  275 (311)
T 2p5y_A          233 --SL---EGIYNVGTGEGHTTREVLMAVAEAAGKAPEVQPAP----------------------------PR---PGDL-  275 (311)
T ss_dssp             --HC---CEEEEESCSCCEEHHHHHHHHHHHHTCCCCEEEEC----------------------------CC---TTCC-
T ss_pred             --CC---CCEEEeCCCCCccHHHHHHHHHHHhCCCCCceeCC----------------------------CC---ccch-
Confidence              22   78999999999999999999999999876543322                            11   0011 


Q ss_pred             hhcccceecHHHHHHhcCCCCCCChHHHHHHHHHHHHhc
Q 017760          222 KVGVTHYFSLLKAKDELCYVPIVSPREGMAATISYWQDR  260 (366)
Q Consensus       222 ~~~~~~~~d~~ka~~~LG~~p~~~~~e~l~~~v~~~~~~  260 (366)
                         ....+|++|+++ |||+|.++++++|+++++||+++
T Consensus       276 ---~~~~~d~~k~~~-lg~~p~~~~~~~l~~~~~~~~~~  310 (311)
T 2p5y_A          276 ---ERSVLSPLKLMA-HGWRPKVGFQEGIRLTVDHFRGA  310 (311)
T ss_dssp             ---SBCCBCCHHHHT-TTCCCSSCHHHHHHHHHHHHHTC
T ss_pred             ---hhccCCHHHHHH-CCCCCCCCHHHHHHHHHHHHHhh
Confidence               124689999999 99999999999999999999763

>1ek6_A UDP-galactose 4-epimerase; short-chain dehydrogenase, galactosemia, isomerase; HET: NAI UPG; 1.50A {Homo sapiens} SCOP: c.2.1.2 PDB: 1ek5_A* 1hzj_A* 1i3k_A* 1i3l_A* 1i3m_A* 1i3n_A*

Probab=99.92  E-value=2.2e-24  Score=205.05  Aligned_cols=146  Identities=14%  Similarity=0.123  Sum_probs=112.7

Q ss_pred             CceEEEEeCCccccCCC------------CCCHHHHHHHHH-cCCCCeeec------CCCcceeceeHHHHHHHHHHHHh
Q 017760           72 CLYTCAVRPAAIYGPGE------------ERHLPRIVSLAK-LGLVPFKIG------EPSVKTDWIYVDNLVLALILASM  132 (366)
Q Consensus        72 ~l~~~ilRp~~iyGp~~------------~~~l~~~i~~~~-~g~~~~~~g------~~~~~~~~v~vdDla~a~~~a~~  132 (366)
                      +++++++||+++|||+.            ..+++.++..+. ++..+.++|      ++++.++|+|++|+|++++.+++
T Consensus       177 ~~~~~~lR~~~v~G~~~~g~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~g~~~~~~i~v~Dva~a~~~~~~  256 (348)
T 1ek6_A          177 TWNAVLLRYFNPTGAHASGCIGEDPQGIPNNLMPYVSQVAIGRREALNVFGNDYDTEDGTGVRDYIHVVDLAKGHIAALR  256 (348)
T ss_dssp             TCEEEEEEECEEECCCTTSSCCCCCSSSCCSHHHHHHHHHHTSSSCEEEECSCSSSSSSSCEECEEEHHHHHHHHHHHHH
T ss_pred             CcceEEEeeccccCCCcccccCcCcccchhhHHHHHHHHHHhcCCCeEEeCCcccCCCCceEEeeEEHHHHHHHHHHHHh
Confidence            38999999999999952            234566666666 566556666      67889999999999999999997


Q ss_pred             ccccCCCCCCCCCCCCC-ccEEecCCCCCCHHHHHHHHHHhcCCCCCccccCHHHHHHHHHHHHHHHHhhhhccccccCC
Q 017760          133 GLLDDIPGQKGRPIASG-QPYFVSDGFPINTFEFIGPLLKTLDYDLPKSWLAVPHALFLGKVFSFFYSVLYPWLNRWWLP  211 (366)
Q Consensus       133 ~l~~~~~~~~~~~~~~g-~~y~I~~~~~vs~~e~~~~l~~~lg~~~~~~~lp~~~~~~~a~~~e~~~~~~~~~~~~~~~~  211 (366)
                      .          .....+ ++||+++++++|+.|+++.+.+.+|.+.+....|                            
T Consensus       257 ~----------~~~~~g~~~~ni~~~~~~s~~e~~~~i~~~~g~~~~~~~~~----------------------------  298 (348)
T 1ek6_A          257 K----------LKEQCGCRIYNLGTGTGYSVLQMVQAMEKASGKKIPYKVVA----------------------------  298 (348)
T ss_dssp             H----------HTTTCCEEEEEECCSCCEEHHHHHHHHHHHHCSCCCEEEEC----------------------------
T ss_pred             c----------ccccCCceEEEeCCCCCccHHHHHHHHHHHhCCCCceeeCC----------------------------
Confidence            3          111334 8999999999999999999999999876543322                            


Q ss_pred             CCCCcHHhhhhhcccceecHHHHHHhcCCCCCCChHHHHHHHHHHHHhccc
Q 017760          212 QPLILPAEVYKVGVTHYFSLLKAKDELCYVPIVSPREGMAATISYWQDRKR  262 (366)
Q Consensus       212 ~p~l~~~ev~~~~~~~~~d~~ka~~~LG~~p~~~~~e~l~~~v~~~~~~~~  262 (366)
                      ...   .+    .....+|++|++++|||+|+++++++++++++||+++..
T Consensus       299 ~~~---~~----~~~~~~d~~k~~~~lG~~p~~~l~~~l~~~~~w~~~~~~  342 (348)
T 1ek6_A          299 RRE---GD----VAACYANPSLAQEELGWTAALGLDRMCEDLWRWQKQNPS  342 (348)
T ss_dssp             CCT---TC----CSEECBCCHHHHHTTCCCCCCCHHHHHHHHHHHHHHCTT
T ss_pred             CCC---cc----chhhccCHHHHHHhcCCCCCCCHHHHHHHHHHHHHhccc
Confidence            100   01    113468999999999999999999999999999987643

>1oc2_A DTDP-glucose 4,6-dehydratase; lyase, NADH, rhamnose; HET: TDX NAD; 1.5A {Streptococcus suis} SCOP: c.2.1.2 PDB: 1ker_A* 1ket_A* 1kep_A*

Probab=99.92  E-value=1.1e-24  Score=207.03  Aligned_cols=204  Identities=20%  Similarity=0.261  Sum_probs=158.3

Q ss_pred             CCeEEEEcCCChhHHHHHHHHHHc--CCceEEEEecCCCCcc---cccccCCCeEEEEcc--------------------
Q 017760           11 GKTFLVTGGLGHVGSALCLELVRR--GAYQVRAFDLRTNSPW---SHLLINHGVHCIQGL--------------------   65 (366)
Q Consensus        11 ~~~VlITGgtGfiG~~L~~~L~~~--g~~~V~~~dr~~~~~~---~~~~~~~~v~~i~gD--------------------   65 (366)
                      ||+|+||||+||+|+++++.|+++  | ++|++++|+.....   ...+..++++++.+|                    
T Consensus         4 m~~vlVTGatG~iG~~l~~~L~~~~~g-~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~Dl~d~~~~~~~~~~~d~vih~   82 (348)
T 1oc2_A            4 FKNIIVTGGAGFIGSNFVHYVYNNHPD-VHVTVLDKLTYAGNKANLEAILGDRVELVVGDIADAELVDKLAAKADAIVHY   82 (348)
T ss_dssp             CSEEEEETTTSHHHHHHHHHHHHHCTT-CEEEEEECCCTTCCGGGTGGGCSSSEEEEECCTTCHHHHHHHHTTCSEEEEC
T ss_pred             CcEEEEeCCccHHHHHHHHHHHHhCCC-CEEEEEeCCCCCCChhHHhhhccCCeEEEECCCCCHHHHHHHhhcCCEEEEC
Confidence            579999999999999999999999  7 59999999753221   112223567788887                    


Q ss_pred             -----------------------------------------cc------C------------------------------
Q 017760           66 -----------------------------------------RK------N------------------------------   68 (366)
Q Consensus        66 -----------------------------------------ks------~------------------------------   68 (366)
                                                               -+      .                              
T Consensus        83 A~~~~~~~~~~~~~~~~~~Nv~g~~~l~~a~~~~~~~~v~~SS~~vyg~~~~~~~~~~~~~~~~~~~~E~~~~~~~~~Y~  162 (348)
T 1oc2_A           83 AAESHNDNSLNDPSPFIHTNFIGTYTLLEAARKYDIRFHHVSTDEVYGDLPLREDLPGHGEGPGEKFTAETNYNPSSPYS  162 (348)
T ss_dssp             CSCCCHHHHHHCCHHHHHHHTHHHHHHHHHHHHHTCEEEEEEEGGGGCCBCCGGGSTTTTCSTTSSBCTTSCCCCCSHHH
T ss_pred             CcccCccchhhCHHHHHHHHHHHHHHHHHHHHHhCCeEEEecccceeCCCcccccccccccccCCCcCCCCCCCCCCccH
Confidence                                                     00      0                              


Q ss_pred             --------------CCCCceEEEEeCCccccCCCC--CCHHHHHHHHHcCCCCeeecCCCcceeceeHHHHHHHHHHHHh
Q 017760           69 --------------NRKCLYTCAVRPAAIYGPGEE--RHLPRIVSLAKLGLVPFKIGEPSVKTDWIYVDNLVLALILASM  132 (366)
Q Consensus        69 --------------~~~~l~~~ilRp~~iyGp~~~--~~l~~~i~~~~~g~~~~~~g~~~~~~~~v~vdDla~a~~~a~~  132 (366)
                                    .+.+++++++||+.+|||+..  ..++.++..+.+|..+.++++++..++|+|++|+|++++.+++
T Consensus       163 ~sK~~~e~~~~~~~~~~gi~~~ilrp~~v~G~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~v~Dva~~~~~~~~  242 (348)
T 1oc2_A          163 STKAASDLIVKAWVRSFGVKATISNCSNNYGPYQHIEKFIPRQITNILAGIKPKLYGEGKNVRDWIHTNDHSTGVWAILT  242 (348)
T ss_dssp             HHHHHHHHHHHHHHHHHCCEEEEEEECCEESTTCCTTSHHHHHHHHHHHTCCCEEETTSCCEEECEEHHHHHHHHHHHHH
T ss_pred             HHHHHHHHHHHHHHHHhCCCEEEEeeceeeCCCCCccchHHHHHHHHHcCCCceEecCCCceEeeEEHHHHHHHHHHHhh
Confidence                          001577999999999999874  4567788888888877778999999999999999999999986


Q ss_pred             ccccCCCCCCCCCCCCCccEEecCCCCCCHHHHHHHHHHhcCCCCCccccCHHHHHHHHHHHHHHHHhhhhccccccCCC
Q 017760          133 GLLDDIPGQKGRPIASGQPYFVSDGFPINTFEFIGPLLKTLDYDLPKSWLAVPHALFLGKVFSFFYSVLYPWLNRWWLPQ  212 (366)
Q Consensus       133 ~l~~~~~~~~~~~~~~g~~y~I~~~~~vs~~e~~~~l~~~lg~~~~~~~lp~~~~~~~a~~~e~~~~~~~~~~~~~~~~~  212 (366)
                      .            ...|++||+++++++|+.|+++.+.+.+|.+.+.+..                           .+.
T Consensus       243 ~------------~~~g~~~~i~~~~~~s~~e~~~~i~~~~g~~~~~~~~---------------------------~~~  283 (348)
T 1oc2_A          243 K------------GRMGETYLIGADGEKNNKEVLELILEKMGQPKDAYDH---------------------------VTD  283 (348)
T ss_dssp             H------------CCTTCEEEECCSCEEEHHHHHHHHHHHTTCCTTCSEE---------------------------ECC
T ss_pred             C------------CCCCCeEEeCCCCCCCHHHHHHHHHHHhCCCcccccc---------------------------CCC
Confidence            3            2367899999999999999999999999977542210                           011


Q ss_pred             CCCcHHhhhhhcccceecHHHHHHhcCCCCCCC-hHHHHHHHHHHHHhcc
Q 017760          213 PLILPAEVYKVGVTHYFSLLKAKDELCYVPIVS-PREGMAATISYWQDRK  261 (366)
Q Consensus       213 p~l~~~ev~~~~~~~~~d~~ka~~~LG~~p~~~-~~e~l~~~v~~~~~~~  261 (366)
                      ..   .+    .....+|++|++++|||+|+++ ++++|+++++||+++.
T Consensus       284 ~~---~~----~~~~~~d~~k~~~~lG~~p~~~~~~~~l~~~~~~~~~~~  326 (348)
T 1oc2_A          284 RA---GH----DLRYAIDASKLRDELGWTPQFTDFSEGLEETIQWYTDNQ  326 (348)
T ss_dssp             CT---TC----CCBCCBCCHHHHHHHCCCCSCCCHHHHHHHHHHHHHHTH
T ss_pred             CC---Cc----ccccccCHHHHHHHcCCCCCCCcHHHHHHHHHHHHHHhh
Confidence            10   00    1223589999999999999988 9999999999998754

>1r6d_A TDP-glucose-4,6-dehydratase; rossmann fold, short-chain dehydrogenase/reductase, lyase; HET: NAD DAU; 1.35A {Streptomyces venezuelae} SCOP: c.2.1.2 PDB: 1r66_A*

Probab=99.92  E-value=1.1e-24  Score=206.38  Aligned_cols=203  Identities=22%  Similarity=0.314  Sum_probs=156.0

Q ss_pred             CeEEEEcCCChhHHHHHHHHHHc---C---CceEEEEecCCCCcccc---cc-cCCCeEEEEcc----------------
Q 017760           12 KTFLVTGGLGHVGSALCLELVRR---G---AYQVRAFDLRTNSPWSH---LL-INHGVHCIQGL----------------   65 (366)
Q Consensus        12 ~~VlITGgtGfiG~~L~~~L~~~---g---~~~V~~~dr~~~~~~~~---~~-~~~~v~~i~gD----------------   65 (366)
                      |+|+||||+||+|++++++|+++   |   + +|++++|+.......   .+ ...+++++++|                
T Consensus         1 M~vlVTGatG~iG~~l~~~L~~~~~~g~~~~-~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~Dl~d~~~~~~~~~~~d~   79 (337)
T 1r6d_A            1 MRLLVTGGAGFIGSHFVRQLLAGAYPDVPAD-EVIVLDSLTYAGNRANLAPVDADPRLRFVHGDIRDAGLLARELRGVDA   79 (337)
T ss_dssp             CEEEEETTTSHHHHHHHHHHHHTSCTTSCCS-EEEEEECCCTTCCGGGGGGGTTCTTEEEEECCTTCHHHHHHHTTTCCE
T ss_pred             CeEEEECCccHHHHHHHHHHHhhhcCCCCce-EEEEEECCCccCchhhhhhcccCCCeEEEEcCCCCHHHHHHHhcCCCE
Confidence            47999999999999999999996   6   5 899999875322111   11 12467778877                


Q ss_pred             ------------------------------------------------------c---------------------c---
Q 017760           66 ------------------------------------------------------R---------------------K---   67 (366)
Q Consensus        66 ------------------------------------------------------k---------------------s---   67 (366)
                                                                            .                     .   
T Consensus        80 Vih~A~~~~~~~~~~~~~~~~~~Nv~~~~~l~~a~~~~~~~~~v~~SS~~vyg~~~~~~~~E~~~~~~~~~Y~~sK~~~e  159 (337)
T 1r6d_A           80 IVHFAAESHVDRSIAGASVFTETNVQGTQTLLQCAVDAGVGRVVHVSTNQVYGSIDSGSWTESSPLEPNSPYAASKAGSD  159 (337)
T ss_dssp             EEECCSCCCHHHHHHCCHHHHHHHTHHHHHHHHHHHHTTCCEEEEEEEGGGGCCCSSSCBCTTSCCCCCSHHHHHHHHHH
T ss_pred             EEECCCccCchhhhhCHHHHHHHHHHHHHHHHHHHHHcCCCEEEEecchHHhCCCCCCCCCCCCCCCCCCchHHHHHHHH
Confidence                                                                  0                     0   


Q ss_pred             ------CCCCCceEEEEeCCccccCCCC--CCHHHHHHHHHcCCCCeeecCCCcceeceeHHHHHHHHHHHHhccccCCC
Q 017760           68 ------NNRKCLYTCAVRPAAIYGPGEE--RHLPRIVSLAKLGLVPFKIGEPSVKTDWIYVDNLVLALILASMGLLDDIP  139 (366)
Q Consensus        68 ------~~~~~l~~~ilRp~~iyGp~~~--~~l~~~i~~~~~g~~~~~~g~~~~~~~~v~vdDla~a~~~a~~~l~~~~~  139 (366)
                            ..+.+++++++||+.+|||+..  ..++.++..+..|....+++++++.++|+|++|+|++++.+++.      
T Consensus       160 ~~~~~~~~~~g~~~~ilrp~~v~G~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~v~Dva~a~~~~~~~------  233 (337)
T 1r6d_A          160 LVARAYHRTYGLDVRITRCCNNYGPYQHPEKLIPLFVTNLLDGGTLPLYGDGANVREWVHTDDHCRGIALVLAG------  233 (337)
T ss_dssp             HHHHHHHHHHCCCEEEEEECEEECTTCCTTSHHHHHHHHHHTTCCEEEETTSCCEEEEEEHHHHHHHHHHHHHH------
T ss_pred             HHHHHHHHHHCCCEEEEEeeeeECCCCCCCChHHHHHHHHhcCCCcEEeCCCCeeEeeEeHHHHHHHHHHHHhC------
Confidence                  1113678999999999999874  45777888888888777789999999999999999999999863      


Q ss_pred             CCCCCCCCCCccEEecCCCCCCHHHHHHHHHHhcCCCCCccccCHHHHHHHHHHHHHHHHhhhhccccccCCCCCCcHHh
Q 017760          140 GQKGRPIASGQPYFVSDGFPINTFEFIGPLLKTLDYDLPKSWLAVPHALFLGKVFSFFYSVLYPWLNRWWLPQPLILPAE  219 (366)
Q Consensus       140 ~~~~~~~~~g~~y~I~~~~~vs~~e~~~~l~~~lg~~~~~~~lp~~~~~~~a~~~e~~~~~~~~~~~~~~~~~p~l~~~e  219 (366)
                            ...|++||+++++++|+.|+++.+.+.+|.+.+....                      .     +...   .+
T Consensus       234 ------~~~g~~~~v~~~~~~s~~e~~~~i~~~~g~~~~~~~~----------------------~-----~~~~---~~  277 (337)
T 1r6d_A          234 ------GRAGEIYHIGGGLELTNRELTGILLDSLGADWSSVRK----------------------V-----ADRK---GH  277 (337)
T ss_dssp             ------CCTTCEEEECCCCEEEHHHHHHHHHHHHTCCGGGEEE----------------------E-----CCCT---TC
T ss_pred             ------CCCCCEEEeCCCCCccHHHHHHHHHHHhCCCccccee----------------------c-----CCCC---CC
Confidence                  2357899999999999999999999999976432110                      0     1110   00


Q ss_pred             hhhhcccceecHHHHHHhcCCCCCCChHHHHHHHHHHHHhcc
Q 017760          220 VYKVGVTHYFSLLKAKDELCYVPIVSPREGMAATISYWQDRK  261 (366)
Q Consensus       220 v~~~~~~~~~d~~ka~~~LG~~p~~~~~e~l~~~v~~~~~~~  261 (366)
                          .....+|++|++++|||+|.++++++|+++++||+++.
T Consensus       278 ----~~~~~~d~~k~~~~lG~~p~~~~~e~l~~~~~~~~~~~  315 (337)
T 1r6d_A          278 ----DLRYSLDGGKIERELGYRPQVSFADGLARTVRWYRENR  315 (337)
T ss_dssp             ----CCBCCBCCHHHHHHHCCCCCSCHHHHHHHHHHHHHHCH
T ss_pred             ----cceeecCHHHHHHHcCCCCCCCHHHHHHHHHHHHHhch
Confidence                11235899999999999999999999999999998754

>3ius_A Uncharacterized conserved protein; APC63810, silicibacter pomeroyi DSS, structural genomics, PSI-2, protein structure initiative; HET: MSE; 1.66A {Ruegeria pomeroyi dss-3}

Probab=99.92  E-value=1.7e-24  Score=200.39  Aligned_cols=197  Identities=20%  Similarity=0.183  Sum_probs=144.9

Q ss_pred             CCeEEEEcCCChhHHHHHHHHHHcCCceEEEEecCCCCcccccccCCCeEEEEcc-------------------------
Q 017760           11 GKTFLVTGGLGHVGSALCLELVRRGAYQVRAFDLRTNSPWSHLLINHGVHCIQGL-------------------------   65 (366)
Q Consensus        11 ~~~VlITGgtGfiG~~L~~~L~~~g~~~V~~~dr~~~~~~~~~~~~~~v~~i~gD-------------------------   65 (366)
                      ||+|+|||+ ||+|++|++.|+++| ++|++++|++...  ..+...+++++.+|                         
T Consensus         5 ~~~ilVtGa-G~iG~~l~~~L~~~g-~~V~~~~r~~~~~--~~~~~~~~~~~~~D~~d~~~~~~d~vi~~a~~~~~~~~~   80 (286)
T 3ius_A            5 TGTLLSFGH-GYTARVLSRALAPQG-WRIIGTSRNPDQM--EAIRASGAEPLLWPGEEPSLDGVTHLLISTAPDSGGDPV   80 (286)
T ss_dssp             CCEEEEETC-CHHHHHHHHHHGGGT-CEEEEEESCGGGH--HHHHHTTEEEEESSSSCCCCTTCCEEEECCCCBTTBCHH
T ss_pred             cCcEEEECC-cHHHHHHHHHHHHCC-CEEEEEEcChhhh--hhHhhCCCeEEEecccccccCCCCEEEECCCccccccHH
Confidence            479999998 999999999999999 5999999976432  11112233333333                         


Q ss_pred             --------------------------------------------------cc-----CCC-CCceEEEEeCCccccCCCC
Q 017760           66 --------------------------------------------------RK-----NNR-KCLYTCAVRPAAIYGPGEE   89 (366)
Q Consensus        66 --------------------------------------------------ks-----~~~-~~l~~~ilRp~~iyGp~~~   89 (366)
                                                                        |.     ... .+++++++||+++|||++.
T Consensus        81 ~~~l~~a~~~~~~~~~~~v~~Ss~~vyg~~~~~~~~E~~~~~p~~~Y~~sK~~~E~~~~~~~~~~~~ilRp~~v~G~~~~  160 (286)
T 3ius_A           81 LAALGDQIAARAAQFRWVGYLSTTAVYGDHDGAWVDETTPLTPTAARGRWRVMAEQQWQAVPNLPLHVFRLAGIYGPGRG  160 (286)
T ss_dssp             HHHHHHHHHHTGGGCSEEEEEEEGGGGCCCTTCEECTTSCCCCCSHHHHHHHHHHHHHHHSTTCCEEEEEECEEEBTTBS
T ss_pred             HHHHHHHHHhhcCCceEEEEeecceecCCCCCCCcCCCCCCCCCCHHHHHHHHHHHHHHhhcCCCEEEEeccceECCCch
Confidence                                                              00     011 4889999999999999865


Q ss_pred             CCHHHHHHHHHcCCCCeeecCCCcceeceeHHHHHHHHHHHHhccccCCCCCCCCCCCCCccEEecCCCCCCHHHHHHHH
Q 017760           90 RHLPRIVSLAKLGLVPFKIGEPSVKTDWIYVDNLVLALILASMGLLDDIPGQKGRPIASGQPYFVSDGFPINTFEFIGPL  169 (366)
Q Consensus        90 ~~l~~~i~~~~~g~~~~~~g~~~~~~~~v~vdDla~a~~~a~~~l~~~~~~~~~~~~~~g~~y~I~~~~~vs~~e~~~~l  169 (366)
                      .     +..+.+|....+.++ ++.++|+|++|+|++++.+++           .+. .|++||+++++++|+.|+++.+
T Consensus       161 ~-----~~~~~~~~~~~~~~~-~~~~~~i~v~Dva~a~~~~~~-----------~~~-~g~~~~i~~~~~~s~~e~~~~i  222 (286)
T 3ius_A          161 P-----FSKLGKGGIRRIIKP-GQVFSRIHVEDIAQVLAASMA-----------RPD-PGAVYNVCDDEPVPPQDVIAYA  222 (286)
T ss_dssp             S-----STTSSSSCCCEEECT-TCCBCEEEHHHHHHHHHHHHH-----------SCC-TTCEEEECCSCCBCHHHHHHHH
T ss_pred             H-----HHHHhcCCccccCCC-CcccceEEHHHHHHHHHHHHh-----------CCC-CCCEEEEeCCCCccHHHHHHHH
Confidence            4     233456666555555 578999999999999999997           333 6789999999999999999999


Q ss_pred             HHhcCCCCCccccCHHHHHHHHHHHHHHHHhhhhccccccCCCCCCcHHhhhhhcccceecHHHHHHhcCCCCCC-ChHH
Q 017760          170 LKTLDYDLPKSWLAVPHALFLGKVFSFFYSVLYPWLNRWWLPQPLILPAEVYKVGVTHYFSLLKAKDELCYVPIV-SPRE  248 (366)
Q Consensus       170 ~~~lg~~~~~~~lp~~~~~~~a~~~e~~~~~~~~~~~~~~~~~p~l~~~ev~~~~~~~~~d~~ka~~~LG~~p~~-~~~e  248 (366)
                      .+.+|.+.+.. +|.                          ......+........+..+|++|++++|||+|++ ++++
T Consensus       223 ~~~~g~~~~~~-~~~--------------------------~~~~~~~~~~~~~~~~~~~d~~k~~~~lG~~p~~p~~~e  275 (286)
T 3ius_A          223 AELQGLPLPPA-VDF--------------------------DKADLTPMARSFYSENKRVRNDRIKEELGVRLKYPNYRV  275 (286)
T ss_dssp             HHHHTCCCCCE-EEG--------------------------GGSCCCHHHHHTTSCCCEECCHHHHHTTCCCCSCSSHHH
T ss_pred             HHHcCCCCCcc-cch--------------------------hhhccChhHHHhhcCCceeehHHHHHHhCCCCCcCCHHH
Confidence            99999875532 211                          1111222222333455679999999999999998 7999


Q ss_pred             HHHHHHHH
Q 017760          249 GMAATISY  256 (366)
Q Consensus       249 ~l~~~v~~  256 (366)
                      +|+++++.
T Consensus       276 ~l~~~~~~  283 (286)
T 3ius_A          276 GLEALQAD  283 (286)
T ss_dssp             HHHHHHHT
T ss_pred             HHHHHHHh
Confidence            99999863

>3gpi_A NAD-dependent epimerase/dehydratase; structural genomics, unknown function, PSI-2, protein structure initiative; 1.44A {Methylobacillus flagellatus KT}

Probab=99.92  E-value=3.3e-24  Score=198.69  Aligned_cols=189  Identities=18%  Similarity=0.201  Sum_probs=142.0

Q ss_pred             ccCCeEEEEcCCChhHHHHHHHHHHcCCceEEEEecCCCCcccccccCCCeEEEEcc-----------------------
Q 017760            9 IEGKTFLVTGGLGHVGSALCLELVRRGAYQVRAFDLRTNSPWSHLLINHGVHCIQGL-----------------------   65 (366)
Q Consensus         9 ~~~~~VlITGgtGfiG~~L~~~L~~~g~~~V~~~dr~~~~~~~~~~~~~~v~~i~gD-----------------------   65 (366)
                      |++|+|+||| +||+|++|++.|+++| ++|++++|+.+..      +++++++++|                       
T Consensus         1 M~~~~ilVtG-aG~iG~~l~~~L~~~g-~~V~~~~r~~~~~------~~~~~~~~~Dl~d~~~~~~~~~~~~d~vih~a~   72 (286)
T 3gpi_A            1 MSLSKILIAG-CGDLGLELARRLTAQG-HEVTGLRRSAQPM------PAGVQTLIADVTRPDTLASIVHLRPEILVYCVA   72 (286)
T ss_dssp             -CCCCEEEEC-CSHHHHHHHHHHHHTT-CCEEEEECTTSCC------CTTCCEEECCTTCGGGCTTGGGGCCSEEEECHH
T ss_pred             CCCCcEEEEC-CCHHHHHHHHHHHHCC-CEEEEEeCCcccc------ccCCceEEccCCChHHHHHhhcCCCCEEEEeCC
Confidence            4568999999 6999999999999999 5999999986431      1334444444                       


Q ss_pred             -------------------------cc-------------------------------------------CCCCCceEEE
Q 017760           66 -------------------------RK-------------------------------------------NNRKCLYTCA   77 (366)
Q Consensus        66 -------------------------ks-------------------------------------------~~~~~l~~~i   77 (366)
                                               +.                                           .... +++++
T Consensus        73 ~~~~~~~~~~~~n~~~~~~ll~a~~~~~~~~~v~~SS~~vyg~~~~~~~~E~~~~~p~~~Y~~sK~~~E~~~~~-~~~~i  151 (286)
T 3gpi_A           73 ASEYSDEHYRLSYVEGLRNTLSALEGAPLQHVFFVSSTGVYGQEVEEWLDEDTPPIAKDFSGKRMLEAEALLAA-YSSTI  151 (286)
T ss_dssp             HHHHC-----CCSHHHHHHHHHHTTTSCCCEEEEEEEGGGCCCCCSSEECTTSCCCCCSHHHHHHHHHHHHGGG-SSEEE
T ss_pred             CCCCCHHHHHHHHHHHHHHHHHHHhhCCCCEEEEEcccEEEcCCCCCCCCCCCCCCCCChhhHHHHHHHHHHhc-CCeEE
Confidence                                     00                                           0111 78999


Q ss_pred             EeCCccccCCCCCCHHHHHHHHHcCCCCeeecCCCcceeceeHHHHHHHHHHHHhccccCCCCCCCCCCCCCccEEecCC
Q 017760           78 VRPAAIYGPGEERHLPRIVSLAKLGLVPFKIGEPSVKTDWIYVDNLVLALILASMGLLDDIPGQKGRPIASGQPYFVSDG  157 (366)
Q Consensus        78 lRp~~iyGp~~~~~l~~~i~~~~~g~~~~~~g~~~~~~~~v~vdDla~a~~~a~~~l~~~~~~~~~~~~~~g~~y~I~~~  157 (366)
                      +||+.+|||+...    ++..+.+ .  ...++++..++|+|++|+|++++.+++.-         .....+++||++++
T Consensus       152 lR~~~v~G~~~~~----~~~~~~~-~--~~~~~~~~~~~~i~v~Dva~~~~~~~~~~---------~~~~~~~~~~~~~~  215 (286)
T 3gpi_A          152 LRFSGIYGPGRLR----MIRQAQT-P--EQWPARNAWTNRIHRDDGAAFIAYLIQQR---------SHAVPERLYIVTDN  215 (286)
T ss_dssp             EEECEEEBTTBCH----HHHHTTC-G--GGSCSSBCEECEEEHHHHHHHHHHHHHHH---------TTSCCCSEEEECCS
T ss_pred             EecccccCCCchh----HHHHHHh-c--ccCCCcCceeEEEEHHHHHHHHHHHHhhh---------ccCCCCceEEEeCC
Confidence            9999999998763    3444444 2  23477889999999999999999999731         01456889999999


Q ss_pred             CCCCHHHHHHHHHHhcCCCCCccccCHHHHHHHHHHHHHHHHhhhhccccccCCCCCCcHHhhhhhcccceecHHHHHHh
Q 017760          158 FPINTFEFIGPLLKTLDYDLPKSWLAVPHALFLGKVFSFFYSVLYPWLNRWWLPQPLILPAEVYKVGVTHYFSLLKAKDE  237 (366)
Q Consensus       158 ~~vs~~e~~~~l~~~lg~~~~~~~lp~~~~~~~a~~~e~~~~~~~~~~~~~~~~~p~l~~~ev~~~~~~~~~d~~ka~~~  237 (366)
                      +++|+.|+++.+.+.+|.+.+...                              .+        ....+..+|++|++ +
T Consensus       216 ~~~s~~e~~~~i~~~~g~~~~~~~------------------------------~~--------~~~~~~~~d~~k~~-~  256 (286)
T 3gpi_A          216 QPLPVHDLLRWLADRQGIAYPAGA------------------------------TP--------PVQGNKKLSNARLL-A  256 (286)
T ss_dssp             CCEEHHHHHHHHHHHTTCCCCCSC------------------------------CC--------CBCSSCEECCHHHH-H
T ss_pred             CCCCHHHHHHHHHHHcCCCCCCCC------------------------------Cc--------ccCCCeEeeHHHHH-H
Confidence            999999999999999998765321                              11        11223468999998 8


Q ss_pred             cCCCCCC-ChHHHHHHHHHHHHhcc
Q 017760          238 LCYVPIV-SPREGMAATISYWQDRK  261 (366)
Q Consensus       238 LG~~p~~-~~~e~l~~~v~~~~~~~  261 (366)
                      |||+|++ +++++|+++++|++.+.
T Consensus       257 lG~~p~~~~l~e~l~~~~~~~~~~~  281 (286)
T 3gpi_A          257 SGYQLIYPDYVSGYGALLAAMREGH  281 (286)
T ss_dssp             TTCCCSSCSHHHHHHHHHHHHTC--
T ss_pred             cCCCCcCCcHHHHHHHHHHHHhccc
Confidence            9999998 69999999999997644

>1e6u_A GDP-fucose synthetase; epimerase/reductase, SDR, RED; HET: NAP; 1.45A {Escherichia coli} SCOP: c.2.1.2 PDB: 1e7q_A* 1bsv_A* 1fxs_A* 1gfs_A 1e7s_A* 1bws_A* 1e7r_A*

Probab=99.91  E-value=1.7e-24  Score=203.57  Aligned_cols=144  Identities=16%  Similarity=0.186  Sum_probs=114.0

Q ss_pred             CceEEEEeCCccccCCCC------CCHHHHHHHHHc----C-CCCeeecCCCcceeceeHHHHHHHHHHHHhccccCCCC
Q 017760           72 CLYTCAVRPAAIYGPGEE------RHLPRIVSLAKL----G-LVPFKIGEPSVKTDWIYVDNLVLALILASMGLLDDIPG  140 (366)
Q Consensus        72 ~l~~~ilRp~~iyGp~~~------~~l~~~i~~~~~----g-~~~~~~g~~~~~~~~v~vdDla~a~~~a~~~l~~~~~~  140 (366)
                      +++++++||+.+|||++.      .+++.++..+..    | ..+.++++++..++|+|++|+|++++.++++       
T Consensus       155 ~~~~~ilrp~~v~G~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~~g~~~~~~i~v~Dva~~~~~~~~~-------  227 (321)
T 1e6u_A          155 GRDYRSVMPTNLYGPHDNFHPSNSHVIPALLRRFHEATAQKAPDVVVWGSGTPMREFLHVDDMAAASIHVMEL-------  227 (321)
T ss_dssp             CCEEEEEEECEEESTTCCCCTTCSSHHHHHHHHHHHHHHHTCSEEEEESCSCCEECEEEHHHHHHHHHHHHHS-------
T ss_pred             CCCEEEEEeCCcCCcCCCCCCCCCccHHHHHHHHHHhhhcCCCceEEcCCCCEEEEeEEHHHHHHHHHHHHhC-------
Confidence            688999999999999875      456777777654    4 4556678899999999999999999999973       


Q ss_pred             CCCCCCC--------CCccEEecCCCCCCHHHHHHHHHHhcCCCCCccccCHHHHHHHHHHHHHHHHhhhhccccccCCC
Q 017760          141 QKGRPIA--------SGQPYFVSDGFPINTFEFIGPLLKTLDYDLPKSWLAVPHALFLGKVFSFFYSVLYPWLNRWWLPQ  212 (366)
Q Consensus       141 ~~~~~~~--------~g~~y~I~~~~~vs~~e~~~~l~~~lg~~~~~~~lp~~~~~~~a~~~e~~~~~~~~~~~~~~~~~  212 (366)
                          +..        .+++||+++++++|+.|+++.+.+.+|.+.+....|                           ..
T Consensus       228 ----~~~~~~~~~~~~~~~~ni~~~~~~s~~e~~~~i~~~~g~~~~~~~~~---------------------------~~  276 (321)
T 1e6u_A          228 ----AHEVWLENTQPMLSHINVGTGVDCTIRELAQTIAKVVGYKGRVVFDA---------------------------SK  276 (321)
T ss_dssp             ----CHHHHHHTSBTTBCCEEESCSCCEEHHHHHHHHHHHHTCCSEEEEET---------------------------TS
T ss_pred             ----cccccccccccCCceEEeCCCCCccHHHHHHHHHHHhCCCCceEeCC---------------------------CC
Confidence                222        368999999999999999999999999775433221                           11


Q ss_pred             CCCcHHhhhhhcccceecHHHHHHhcCCCCCCChHHHHHHHHHHHHhccc
Q 017760          213 PLILPAEVYKVGVTHYFSLLKAKDELCYVPIVSPREGMAATISYWQDRKR  262 (366)
Q Consensus       213 p~l~~~ev~~~~~~~~~d~~ka~~~LG~~p~~~~~e~l~~~v~~~~~~~~  262 (366)
                      +.        ......+|++|+++ |||+|+++++++|+++++||+++..
T Consensus       277 ~~--------~~~~~~~d~~k~~~-lG~~p~~~~~~~l~~~~~~~~~~~~  317 (321)
T 1e6u_A          277 PD--------GTPRKLLDVTRLHQ-LGWYHEISLEAGLASTYQWFLENQD  317 (321)
T ss_dssp             CC--------CCSBCCBCCHHHHH-TTCCCCCCHHHHHHHHHHHHHHTC-
T ss_pred             CC--------CcccccCCHHHHHh-cCCccCCcHHHHHHHHHHHHHHHHH
Confidence            11        01234689999999 9999999999999999999987654

>1i24_A Sulfolipid biosynthesis protein SQD1; SDR, short-chain dehydrogenase/reductase, rossmann fold, BIO protein; HET: NAD UPG; 1.20A {Arabidopsis thaliana} SCOP: c.2.1.2 PDB: 1i2c_A* 1i2b_A* 1qrr_A*

Probab=99.91  E-value=1.9e-24  Score=209.61  Aligned_cols=146  Identities=16%  Similarity=0.162  Sum_probs=115.3

Q ss_pred             CceEEEEeCCccccCCCC-------------------CCHHHHHHHHHcCCCCeeecCCCcceeceeHHHHHHHHHHHHh
Q 017760           72 CLYTCAVRPAAIYGPGEE-------------------RHLPRIVSLAKLGLVPFKIGEPSVKTDWIYVDNLVLALILASM  132 (366)
Q Consensus        72 ~l~~~ilRp~~iyGp~~~-------------------~~l~~~i~~~~~g~~~~~~g~~~~~~~~v~vdDla~a~~~a~~  132 (366)
                      +++++++||+.||||++.                   ..++.++..+.+|..+.++|++++.++|+||+|+|++++.+++
T Consensus       211 gi~~~ivrp~~v~Gp~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~g~g~~~~~~i~v~Dva~a~~~~l~  290 (404)
T 1i24_A          211 GIRATDLNQGVVYGVKTDETEMHEELRNRLDYDAVFGTALNRFCVQAAVGHPLTVYGKGGQTRGYLDIRDTVQCVEIAIA  290 (404)
T ss_dssp             CCEEEEEEECEEECSCCTTGGGSGGGCCCCCCSTTTCCHHHHHHHHHHHTCCEEEETTSCCEEEEEEHHHHHHHHHHHHH
T ss_pred             CCeEEEEecceeeCCCCCccccccccccccccccchhhHHHHHHHHHHcCCeeEEeCCCCceECcEEHHHHHHHHHHHHh
Confidence            578999999999999862                   4578888888889877778999999999999999999999997


Q ss_pred             ccccCCCCCCCCCCCCC--ccEEecCCCCCCHHHHHHHHHHh---cCCCCCccccCHHHHHHHHHHHHHHHHhhhhcccc
Q 017760          133 GLLDDIPGQKGRPIASG--QPYFVSDGFPINTFEFIGPLLKT---LDYDLPKSWLAVPHALFLGKVFSFFYSVLYPWLNR  207 (366)
Q Consensus       133 ~l~~~~~~~~~~~~~~g--~~y~I~~~~~vs~~e~~~~l~~~---lg~~~~~~~lp~~~~~~~a~~~e~~~~~~~~~~~~  207 (366)
                                 .+...|  ++||+++ +++|+.|+++.+.+.   +|.+.+...+|.                       
T Consensus       291 -----------~~~~~g~~~~yni~~-~~~s~~e~~~~i~~~~~~~g~~~~~~~~p~-----------------------  335 (404)
T 1i24_A          291 -----------NPAKAGEFRVFNQFT-EQFSVNELASLVTKAGSKLGLDVKKMTVPN-----------------------  335 (404)
T ss_dssp             -----------SCCCTTCEEEEEECS-EEEEHHHHHHHHHHHHHTTTCCCCEEEECC-----------------------
T ss_pred             -----------CcccCCCceEEEECC-CCCcHHHHHHHHHHHHHhhCCCccccccCc-----------------------
Confidence                       333345  7999998 889999999999998   787655433321                       


Q ss_pred             ccCCCCCCcHHhhhhhcccceecHHHHHHhcCCCCCCChHHHHHHHHHHHHhcccc
Q 017760          208 WWLPQPLILPAEVYKVGVTHYFSLLKAKDELCYVPIVSPREGMAATISYWQDRKRK  263 (366)
Q Consensus       208 ~~~~~p~l~~~ev~~~~~~~~~d~~ka~~~LG~~p~~~~~e~l~~~v~~~~~~~~~  263 (366)
                           +..   +  .......+|++|++ +|||+|+++++++++++++|++...+.
T Consensus       336 -----~~~---~--~~~~~~~~d~~k~~-~LG~~p~~~~~~~l~~~~~~~~~~~~~  380 (404)
T 1i24_A          336 -----PRV---E--AEEHYYNAKHTKLM-ELGLEPHYLSDSLLDSLLNFAVQFKDR  380 (404)
T ss_dssp             -----SSC---S--CSSCCCCBCCCHHH-HTTCCCCCCCHHHHHHHHHHHHHTGGG
T ss_pred             -----ccC---c--cccceEecCHHHHH-HcCCCcCcCHHHHHHHHHHHHHhhhhc
Confidence                 110   0  01112357999998 699999999999999999999766544

>1orr_A CDP-tyvelose-2-epimerase; rossmann fold, short-chain dehydrogenase/reductase, isomeras; HET: NAD CDP; 1.50A {Salmonella typhi} SCOP: c.2.1.2

Probab=99.91  E-value=3.5e-24  Score=203.27  Aligned_cols=146  Identities=14%  Similarity=0.144  Sum_probs=113.8

Q ss_pred             CceEEEEeCCccccCCCC-----CCHHHHHHHHHcCC-----CCeeecCCCcceeceeHHHHHHHHHHHHhccccCCCCC
Q 017760           72 CLYTCAVRPAAIYGPGEE-----RHLPRIVSLAKLGL-----VPFKIGEPSVKTDWIYVDNLVLALILASMGLLDDIPGQ  141 (366)
Q Consensus        72 ~l~~~ilRp~~iyGp~~~-----~~l~~~i~~~~~g~-----~~~~~g~~~~~~~~v~vdDla~a~~~a~~~l~~~~~~~  141 (366)
                      +++++++||+.+|||+..     ..++.++..+..+.     .+..+|++++.++|+|++|+|++++.+++.        
T Consensus       184 gi~~~ilrp~~v~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~g~~~~~~i~v~Dva~a~~~~~~~--------  255 (347)
T 1orr_A          184 GLNTVVFRHSSMYGGRQFATYDQGWVGWFCQKAVEIKNGINKPFTISGNGKQVRDVLHAEDMISLYFTALAN--------  255 (347)
T ss_dssp             CCEEEEEEECCEECTTCCCBTTBCHHHHHHHHHHHHHTTCCCCEEEESSSCCEEECEEHHHHHHHHHHHHHT--------
T ss_pred             CCcEEEEccCceeCcCCCCCCcCcHHHHHHHHHHhCcccCCCCeEEecCCcceEeeEEHHHHHHHHHHHHhc--------
Confidence            578999999999999863     24666776665554     556789999999999999999999999862        


Q ss_pred             CCCCCCCCccEEecCCC--CCCHHHHHHHHHHhcCCCCCccccCHHHHHHHHHHHHHHHHhhhhccccccCCCCCCcHHh
Q 017760          142 KGRPIASGQPYFVSDGF--PINTFEFIGPLLKTLDYDLPKSWLAVPHALFLGKVFSFFYSVLYPWLNRWWLPQPLILPAE  219 (366)
Q Consensus       142 ~~~~~~~g~~y~I~~~~--~vs~~e~~~~l~~~lg~~~~~~~lp~~~~~~~a~~~e~~~~~~~~~~~~~~~~~p~l~~~e  219 (366)
                        .+...|++||+++++  ++|+.|+++.+.+.+|.+.+....|.                           .+    .+
T Consensus       256 --~~~~~g~~~~v~~~~~~~~s~~e~~~~i~~~~g~~~~~~~~~~---------------------------~~----~~  302 (347)
T 1orr_A          256 --VSKIRGNAFNIGGTIVNSLSLLELFKLLEDYCNIDMRFTNLPV---------------------------RE----SD  302 (347)
T ss_dssp             --HHHHTTCEEEESSCGGGEEEHHHHHHHHHHHHTCCCCEEEECC---------------------------CS----SC
T ss_pred             --cccCCCCEEEeCCCCCCCccHHHHHHHHHHHhCCCCCceeCCC---------------------------CC----CC
Confidence              123468899999987  49999999999999998765443320                           00    00


Q ss_pred             hhhhcccceecHHHHHHhcCCCCCCChHHHHHHHHHHHHhccc
Q 017760          220 VYKVGVTHYFSLLKAKDELCYVPIVSPREGMAATISYWQDRKR  262 (366)
Q Consensus       220 v~~~~~~~~~d~~ka~~~LG~~p~~~~~e~l~~~v~~~~~~~~  262 (366)
                          .....+|++|++++|||+|+++++++|+++++|++++..
T Consensus       303 ----~~~~~~d~~k~~~~lG~~p~~~~~e~l~~~~~~~~~~~~  341 (347)
T 1orr_A          303 ----QRVFVADIKKITNAIDWSPKVSAKDGVQKMYDWTSSILE  341 (347)
T ss_dssp             ----CSEECBCCHHHHHHHCCCCCSCHHHHHHHHHHHHHHC--
T ss_pred             ----cceeecCHHHHHHHHCCCccCCHHHHHHHHHHHHHHHHH
Confidence                112358999999999999999999999999999988654

>3sc6_A DTDP-4-dehydrorhamnose reductase; RFBD, structural genomics, infectious diseases, bacillus anthracis STR. AMES, rhamnose biosynthetic pathway; HET: NAP; 2.65A {Bacillus anthracis} SCOP: c.2.1.0

Probab=99.91  E-value=7.6e-25  Score=202.85  Aligned_cols=201  Identities=14%  Similarity=0.099  Sum_probs=150.2

Q ss_pred             CeEEEEcCCChhHHHHHHHHHHcCCceEEEEecCCCCccc-c----ccc--CCCeEEEEc----------c---------
Q 017760           12 KTFLVTGGLGHVGSALCLELVRRGAYQVRAFDLRTNSPWS-H----LLI--NHGVHCIQG----------L---------   65 (366)
Q Consensus        12 ~~VlITGgtGfiG~~L~~~L~~~g~~~V~~~dr~~~~~~~-~----~~~--~~~v~~i~g----------D---------   65 (366)
                      |+|+||||+||+|+++++.|+++| ++|++++|....-.. .    .+.  ..++-++.+          |         
T Consensus         6 m~ilVtGatG~iG~~l~~~L~~~g-~~V~~~~r~~~D~~d~~~~~~~~~~~~~d~vi~~a~~~~~~~~~~~~~~~~~~n~   84 (287)
T 3sc6_A            6 ERVIITGANGQLGKQLQEELNPEE-YDIYPFDKKLLDITNISQVQQVVQEIRPHIIIHCAAYTKVDQAEKERDLAYVINA   84 (287)
T ss_dssp             EEEEEESTTSHHHHHHHHHSCTTT-EEEEEECTTTSCTTCHHHHHHHHHHHCCSEEEECCCCCCHHHHTTCHHHHHHHHT
T ss_pred             eEEEEECCCCHHHHHHHHHHHhCC-CEEEEecccccCCCCHHHHHHHHHhcCCCEEEECCcccChHHHhcCHHHHHHHHH
Confidence            389999999999999999999999 699999885422111 0    111  122222211          0         


Q ss_pred             -------------------------------------------------cc-----CCCCCceEEEEeCCccccCCCCCC
Q 017760           66 -------------------------------------------------RK-----NNRKCLYTCAVRPAAIYGPGEERH   91 (366)
Q Consensus        66 -------------------------------------------------ks-----~~~~~l~~~ilRp~~iyGp~~~~~   91 (366)
                                                                       |.     ......+++++||+.+|||++..+
T Consensus        85 ~~~~~l~~~~~~~~~~~v~~SS~~vy~~~~~~~~~E~~~~~p~~~Y~~sK~~~E~~~~~~~~~~~ilR~~~v~G~~~~~~  164 (287)
T 3sc6_A           85 IGARNVAVASQLVGAKLVYISTDYVFQGDRPEGYDEFHNPAPINIYGASKYAGEQFVKELHNKYFIVRTSWLYGKYGNNF  164 (287)
T ss_dssp             HHHHHHHHHHHHHTCEEEEEEEGGGSCCCCSSCBCTTSCCCCCSHHHHHHHHHHHHHHHHCSSEEEEEECSEECSSSCCH
T ss_pred             HHHHHHHHHHHHcCCeEEEEchhhhcCCCCCCCCCCCCCCCCCCHHHHHHHHHHHHHHHhCCCcEEEeeeeecCCCCCcH
Confidence                                                             00     001133689999999999998888


Q ss_pred             HHHHHHHHHcCCCCeeecCCCcceeceeHHHHHHHHHHHHhccccCCCCCCCCCCCCCccEEecCCCCCCHHHHHHHHHH
Q 017760           92 LPRIVSLAKLGLVPFKIGEPSVKTDWIYVDNLVLALILASMGLLDDIPGQKGRPIASGQPYFVSDGFPINTFEFIGPLLK  171 (366)
Q Consensus        92 l~~~i~~~~~g~~~~~~g~~~~~~~~v~vdDla~a~~~a~~~l~~~~~~~~~~~~~~g~~y~I~~~~~vs~~e~~~~l~~  171 (366)
                      ++.++..+..+..+...|+  +.++|+|++|+|++++.+++           .+.  +++||+++++++|+.|+++.+.+
T Consensus       165 ~~~~~~~~~~~~~~~~~~~--~~~~~i~v~Dva~~~~~~~~-----------~~~--~~~~~i~~~~~~s~~e~~~~i~~  229 (287)
T 3sc6_A          165 VKTMIRLGKEREEISVVAD--QIGSPTYVADLNVMINKLIH-----------TSL--YGTYHVSNTGSCSWFEFAKKIFS  229 (287)
T ss_dssp             HHHHHHHHTTCSEEEEECS--CEECCEEHHHHHHHHHHHHT-----------SCC--CEEEECCCBSCEEHHHHHHHHHH
T ss_pred             HHHHHHHHHcCCCeEeecC--cccCceEHHHHHHHHHHHHh-----------CCC--CCeEEEcCCCcccHHHHHHHHHH
Confidence            8999988888887666665  78999999999999999996           322  77999999999999999999999


Q ss_pred             hcCCCCCccccCHHHHHHHHHHHHHHHHhhhhccccccCCCCCCcHHhhhhhcccceecHHHHHHhcCCCCCCChHHHHH
Q 017760          172 TLDYDLPKSWLAVPHALFLGKVFSFFYSVLYPWLNRWWLPQPLILPAEVYKVGVTHYFSLLKAKDELCYVPIVSPREGMA  251 (366)
Q Consensus       172 ~lg~~~~~~~lp~~~~~~~a~~~e~~~~~~~~~~~~~~~~~p~l~~~ev~~~~~~~~~d~~ka~~~LG~~p~~~~~e~l~  251 (366)
                      .+|.+.+...+|....                       +.+...       .....+|++|++ ++||+|.++++++|+
T Consensus       230 ~~g~~~~~~~~~~~~~-----------------------~~~~~~-------~~~~~~d~~k~~-~lg~~p~~~~~~~l~  278 (287)
T 3sc6_A          230 YANMKVNVLPVSTEEF-----------------------GAAAAR-------PKYSIFQHNMLR-LNGFLQMPSWEEGLE  278 (287)
T ss_dssp             HHTCCCEEEEECHHHH-----------------------CCSSCC-------CSBCCBCCHHHH-HTTCCCCCBHHHHHH
T ss_pred             HcCCCcceeeeehhhc-----------------------CcccCC-------CCcccccHHHHH-hhCCCCCccHHHHHH
Confidence            9998876655654432                       111111       112358999999 899999999999999


Q ss_pred             HHHHHHHh
Q 017760          252 ATISYWQD  259 (366)
Q Consensus       252 ~~v~~~~~  259 (366)
                      ++++|+++
T Consensus       279 ~~~~~~~~  286 (287)
T 3sc6_A          279 RFFIETKS  286 (287)
T ss_dssp             HHHHHTC-
T ss_pred             HHHHHHhc
Confidence            99999865

>1udb_A Epimerase, UDP-galactose-4-epimerase; isomerase; HET: NAD UFG; 1.65A {Escherichia coli} SCOP: c.2.1.2 PDB: 1lrj_A* 1nai_A* 1uda_A* 1nah_A* 1xel_A* 1kvq_A* 1kvs_A* 1udc_A* 2udp_A* 1a9z_A* 1kvt_A* 1kvr_A* 1lrk_A* 1lrl_A* 1kvu_A* 1a9y_A*

Probab=99.91  E-value=2.1e-23  Score=197.60  Aligned_cols=147  Identities=14%  Similarity=0.096  Sum_probs=107.8

Q ss_pred             CceEEEEeCCccccCCC------------CCCHHHHHHHHH-cCCCCeeec------CCCcceeceeHHHHHHHHHHHHh
Q 017760           72 CLYTCAVRPAAIYGPGE------------ERHLPRIVSLAK-LGLVPFKIG------EPSVKTDWIYVDNLVLALILASM  132 (366)
Q Consensus        72 ~l~~~ilRp~~iyGp~~------------~~~l~~~i~~~~-~g~~~~~~g------~~~~~~~~v~vdDla~a~~~a~~  132 (366)
                      +++++++||+++|||+.            ...++.+...+. .+..+.++|      ++++.++|+|++|+|++++.+++
T Consensus       169 ~~~~~ilR~~~v~G~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~g~~~~~~i~v~Dva~a~~~~l~  248 (338)
T 1udb_A          169 DWSIALLRYFNPVGAHPSGDMGEDPQGIPNNLMPYIAQVAVGRRDSLAIFGNDYPTEDGTGVRDYIHVMDLADGHVVAME  248 (338)
T ss_dssp             TCEEEEEEECEEECCCTTSSSCCCCCSSCCSHHHHHHHHHHTSSSCEEEECSCSSSSSSSCEECEEEHHHHHHHHHHHHH
T ss_pred             CCceEEEeeceecCCCcccccccccccchhhHHHHHHHHHHhcCCCcEEecCcccCCCCceeeeeEEHHHHHHHHHHHHh
Confidence            68999999999999842            123455555444 334344444      56788999999999999999987


Q ss_pred             ccccCCCCCCCCCCCCCccEEecCCCCCCHHHHHHHHHHhcCCCCCccccCHHHHHHHHHHHHHHHHhhhhccccccCCC
Q 017760          133 GLLDDIPGQKGRPIASGQPYFVSDGFPINTFEFIGPLLKTLDYDLPKSWLAVPHALFLGKVFSFFYSVLYPWLNRWWLPQ  212 (366)
Q Consensus       133 ~l~~~~~~~~~~~~~~g~~y~I~~~~~vs~~e~~~~l~~~lg~~~~~~~lp~~~~~~~a~~~e~~~~~~~~~~~~~~~~~  212 (366)
                      ..         .....+++||+++++++|+.|+++.+.+.+|.+.+....|                            .
T Consensus       249 ~~---------~~~~~~~~yni~~~~~~s~~e~~~~i~~~~g~~~~~~~~~----------------------------~  291 (338)
T 1udb_A          249 KL---------ANKPGVHIYNLGAGVGNSVLDVVNAFSKACGKPVNYHFAP----------------------------R  291 (338)
T ss_dssp             HH---------TTCCEEEEEEESCSCCEEHHHHHHHHHHHHTSCCCEEEEC----------------------------C
T ss_pred             hh---------hccCCCcEEEecCCCceeHHHHHHHHHHHhCCCCcceeCC----------------------------C
Confidence            31         0012247999999999999999999999999775543222                            1


Q ss_pred             CCCcHHhhhhhcccceecHHHHHHhcCCCCCCChHHHHHHHHHHHHhccc
Q 017760          213 PLILPAEVYKVGVTHYFSLLKAKDELCYVPIVSPREGMAATISYWQDRKR  262 (366)
Q Consensus       213 p~l~~~ev~~~~~~~~~d~~ka~~~LG~~p~~~~~e~l~~~v~~~~~~~~  262 (366)
                      +   +.+.    ....+|++|++++|||+|+++++++++++++|++++..
T Consensus       292 ~---~~~~----~~~~~d~~k~~~~lG~~p~~~l~~~l~~~~~w~~~~~~  334 (338)
T 1udb_A          292 R---EGDL----PAYWADASKADRELNWRVTRTLDEMAQDTWHWQSRHPQ  334 (338)
T ss_dssp             C---TTCC----SBCCBCCHHHHHHHCCCCCCCHHHHHHHHHHHHHHCTT
T ss_pred             C---CCch----hhhhcCHHHHHHHcCCCcCCCHHHHHHHHHHHHHhccc
Confidence            0   0000    12357999999999999999999999999999987643

>1t2a_A GDP-mannose 4,6 dehydratase; structural genomics consortium, rossman-fold, short-chain dehydrogenase/reductase, SDR, structural genomics,lyase; HET: NDP GDP; 1.84A {Homo sapiens} SCOP: c.2.1.2

Probab=99.91  E-value=1.8e-23  Score=201.02  Aligned_cols=223  Identities=20%  Similarity=0.131  Sum_probs=153.8

Q ss_pred             CeEEEEcCCChhHHHHHHHHHHcCCceEEEEecCCCCcc---cccc-------cCCCeEEEEcc----------------
Q 017760           12 KTFLVTGGLGHVGSALCLELVRRGAYQVRAFDLRTNSPW---SHLL-------INHGVHCIQGL----------------   65 (366)
Q Consensus        12 ~~VlITGgtGfiG~~L~~~L~~~g~~~V~~~dr~~~~~~---~~~~-------~~~~v~~i~gD----------------   65 (366)
                      ++|+||||+||+|+++++.|+++| ++|++++|++....   ...+       ...+++++++|                
T Consensus        25 ~~vlVtGatG~iG~~l~~~L~~~g-~~V~~~~r~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~Dl~d~~~~~~~~~~~~~  103 (375)
T 1t2a_A           25 NVALITGITGQDGSYLAEFLLEKG-YEVHGIVRRSSSFNTGRIEHLYKNPQAHIEGNMKLHYGDLTDSTCLVKIINEVKP  103 (375)
T ss_dssp             CEEEEETTTSHHHHHHHHHHHHTT-CEEEEEECCCSSCCCTTTGGGC---------CEEEEECCTTCHHHHHHHHHHHCC
T ss_pred             cEEEEECCCchHHHHHHHHHHHCC-CEEEEEECCccccchhhHHHHhhhhccccCCCceEEEccCCCHHHHHHHHHhcCC
Confidence            689999999999999999999999 59999999865311   1111       12456677777                


Q ss_pred             -----------------------------------------c---c----------------------------------
Q 017760           66 -----------------------------------------R---K----------------------------------   67 (366)
Q Consensus        66 -----------------------------------------k---s----------------------------------   67 (366)
                                                               .   .                                  
T Consensus       104 d~vih~A~~~~~~~~~~~~~~~~~~N~~g~~~l~~a~~~~~~~~~~~iv~~SS~~~~~~~~~~~~~E~~~~~~~~~Y~~s  183 (375)
T 1t2a_A          104 TEIYNLGAQSHVKISFDLAEYTADVDGVGTLRLLDAVKTCGLINSVKFYQASTSELYGKVQEIPQKETTPFYPRSPYGAA  183 (375)
T ss_dssp             SEEEECCSCCCHHHHHHSHHHHHHHHTHHHHHHHHHHHHTTCTTTCEEEEEEEGGGTCSCSSSSBCTTSCCCCCSHHHHH
T ss_pred             CEEEECCCcccccccccCHHHHHHHHHHHHHHHHHHHHHhCCCccceEEEecchhhhCCCCCCCCCccCCCCCCChhHHH
Confidence                                                     0   0                                  


Q ss_pred             -----------CCCCCceEEEEeCCccccCCCC-CC----HHHHHHHHHcCCC-CeeecCCCcceeceeHHHHHHHHHHH
Q 017760           68 -----------NNRKCLYTCAVRPAAIYGPGEE-RH----LPRIVSLAKLGLV-PFKIGEPSVKTDWIYVDNLVLALILA  130 (366)
Q Consensus        68 -----------~~~~~l~~~ilRp~~iyGp~~~-~~----l~~~i~~~~~g~~-~~~~g~~~~~~~~v~vdDla~a~~~a  130 (366)
                                 ....+++++++||+++|||+.. .+    +..++..+.+|.. ...+|++++.++|+|++|+|++++.+
T Consensus       184 K~~~e~~~~~~~~~~~~~~~i~r~~~~~gp~~~~~~~~~~~~~~~~~~~~g~~~~~~~g~~~~~~~~i~v~Dva~a~~~~  263 (375)
T 1t2a_A          184 KLYAYWIVVNFREAYNLFAVNGILFNHESPRRGANFVTRKISRSVAKIYLGQLECFSLGNLDAKRDWGHAKDYVEAMWLM  263 (375)
T ss_dssp             HHHHHHHHHHHHHHHCCEEEEEEECCEECTTSCTTSHHHHHHHHHHHHHHTSCSCEEESCTTCEECCEEHHHHHHHHHHH
T ss_pred             HHHHHHHHHHHHHHhCCCEEEEecccccCCCCCCCcchHHHHHHHHHHHcCCCceeEeCCCCceeeeEEHHHHHHHHHHH
Confidence                       0112678999999999999764 23    3445555666653 35678889999999999999999999


Q ss_pred             HhccccCCCCCCCCCCCCCccEEecCCCCCCHHHHHHHHHHhcCCCCCcc--ccCHHHHHHHHHHHHHHHHhhhhccccc
Q 017760          131 SMGLLDDIPGQKGRPIASGQPYFVSDGFPINTFEFIGPLLKTLDYDLPKS--WLAVPHALFLGKVFSFFYSVLYPWLNRW  208 (366)
Q Consensus       131 ~~~l~~~~~~~~~~~~~~g~~y~I~~~~~vs~~e~~~~l~~~lg~~~~~~--~lp~~~~~~~a~~~e~~~~~~~~~~~~~  208 (366)
                      ++           .+.  +++||+++++++|+.|+++.+.+.+|.+.+..  .+|.+.+.  +        .++.... .
T Consensus       264 ~~-----------~~~--~~~~ni~~~~~~s~~e~~~~i~~~~g~~~~~~~~~~p~~~~~--~--------~~~~~~~-~  319 (375)
T 1t2a_A          264 LQ-----------NDE--PEDFVIATGEVHSVREFVEKSFLHIGKTIVWEGKNENEVGRC--K--------ETGKVHV-T  319 (375)
T ss_dssp             HH-----------SSS--CCCEEECCSCCEEHHHHHHHHHHHTTCCEEEESCGGGCEEEE--T--------TTCCEEE-E
T ss_pred             Hh-----------cCC--CceEEEeCCCcccHHHHHHHHHHHhCCCcccccccccccccc--c--------cccccee-e
Confidence            97           222  47999999999999999999999999764321  12211110  0        0000000 0


Q ss_pred             cCCCCCCcHHhhhhhcccceecHHHHHHhcCCCCCCChHHHHHHHHHHHHhccccC
Q 017760          209 WLPQPLILPAEVYKVGVTHYFSLLKAKDELCYVPIVSPREGMAATISYWQDRKRKS  264 (366)
Q Consensus       209 ~~~~p~l~~~ev~~~~~~~~~d~~ka~~~LG~~p~~~~~e~l~~~v~~~~~~~~~~  264 (366)
                       ..++...+.+.    ....+|++|++++|||+|+++++++|+++++||++.....
T Consensus       320 -~~~~~~~~~~~----~~~~~d~~k~~~~lG~~p~~~l~e~l~~~~~~~~~~~~~~  370 (375)
T 1t2a_A          320 -VDLKYYRPTEV----DFLQGDCTKAKQKLNWKPRVAFDELVREMVHADVELMRTN  370 (375)
T ss_dssp             -ECGGGSCSSCC----CBCCBCCHHHHHHHCCCCCSCHHHHHHHHHHHHHHHHHHC
T ss_pred             -cCcccCCcccc----hhhcCCHHHHHHhcCCCccCCHHHHHHHHHHHHHHhhccC
Confidence             00001111111    1236799999999999999999999999999998866543

>1db3_A GDP-mannose 4,6-dehydratase; NADP, GDP-fucose, lyase; 2.30A {Escherichia coli} SCOP: c.2.1.2

Probab=99.90  E-value=7.6e-24  Score=203.16  Aligned_cols=171  Identities=15%  Similarity=0.133  Sum_probs=113.0

Q ss_pred             CceEEEEeCCccccCCCCC-C----HHHHHHHHHcCCC-CeeecCCCcceeceeHHHHHHHHHHHHhccccCCCCCCCCC
Q 017760           72 CLYTCAVRPAAIYGPGEER-H----LPRIVSLAKLGLV-PFKIGEPSVKTDWIYVDNLVLALILASMGLLDDIPGQKGRP  145 (366)
Q Consensus        72 ~l~~~ilRp~~iyGp~~~~-~----l~~~i~~~~~g~~-~~~~g~~~~~~~~v~vdDla~a~~~a~~~l~~~~~~~~~~~  145 (366)
                      +++++++|++++|||+... +    +..++..+.+|.. ...+|++++.++|+|++|+|++++.+++           .+
T Consensus       175 ~~~~~~~r~~~~~gp~~~~~~~~~~~~~~~~~~~~g~~~~~~~g~~~~~~~~i~v~Dva~a~~~~~~-----------~~  243 (372)
T 1db3_A          175 GMYACNGILFNHESPRRGETFVTRKITRAIANIAQGLESCLYLGNMDSLRDWGHAKDYVKMQWMMLQ-----------QE  243 (372)
T ss_dssp             CCCEEEEEECCEECTTSCTTSHHHHHHHHHHHHHTTSCCCEEESCTTCEECCEEHHHHHHHHHHTTS-----------SS
T ss_pred             CCCeEEEEECCccCCCCCCcchhhHHHHHHHHHHcCCCCceeecCCCceeeeeEHHHHHHHHHHHHh-----------cC
Confidence            5778999999999998642 2    3455666677763 4567888999999999999999999886           22


Q ss_pred             CCCCccEEecCCCCCCHHHHHHHHHHhcCCCCCccc--cCHH-HHHHHHHHHHHHHHhhhhccccc-cCCCC-CCcHHhh
Q 017760          146 IASGQPYFVSDGFPINTFEFIGPLLKTLDYDLPKSW--LAVP-HALFLGKVFSFFYSVLYPWLNRW-WLPQP-LILPAEV  220 (366)
Q Consensus       146 ~~~g~~y~I~~~~~vs~~e~~~~l~~~lg~~~~~~~--lp~~-~~~~~a~~~e~~~~~~~~~~~~~-~~~~p-~l~~~ev  220 (366)
                        .+++||+++++++|+.|+++.+.+.+|.+.+...  +|.+ .+..+. ..+..    ..++.+. ....| ..++.+ 
T Consensus       244 --~~~~~ni~~~~~~s~~e~~~~i~~~~g~~~~~~~~~~p~~~~~~~~~-~~~~~----~~~~~~~~~~~~~~~~~~~~-  315 (372)
T 1db3_A          244 --QPEDFVIATGVQYSVRQFVEMAAAQLGIKLRFEGTGVEEKGIVVSVT-GHDAP----GVKPGDVIIAVDPRYFRPAE-  315 (372)
T ss_dssp             --SCCCEEECCCCCEEHHHHHHHHHHTTTEEEEEESCGGGCEEEEEEEC-SSSCT----TCCTTCEEEEECGGGCCCCC-
T ss_pred             --CCceEEEcCCCceeHHHHHHHHHHHhCCCcccccccccccccccccc-ccccc----ccccccceeeccccccCCCc-
Confidence              2479999999999999999999999997543211  1100 000000 00000    0000000 00000 011111 


Q ss_pred             hhhcccceecHHHHHHhcCCCCCCChHHHHHHHHHHHHhccccC
Q 017760          221 YKVGVTHYFSLLKAKDELCYVPIVSPREGMAATISYWQDRKRKS  264 (366)
Q Consensus       221 ~~~~~~~~~d~~ka~~~LG~~p~~~~~e~l~~~v~~~~~~~~~~  264 (366)
                         .....+|++|++++|||+|.++++++|+++++||+++...+
T Consensus       316 ---~~~~~~d~~k~~~~lG~~p~~~l~e~l~~~~~~~~~~~~~~  356 (372)
T 1db3_A          316 ---VETLLGDPTKAHEKLGWKPEITLREMVSEMVANDLEAAKKH  356 (372)
T ss_dssp             ----CCCCBCCHHHHHHHCCCCCSCHHHHHHHHHHHHHHHHHTT
T ss_pred             ---hhhhccCHHHHHHHhCCccccCHHHHHHHHHHHHHHhhhcc
Confidence               11235799999999999999999999999999998876554

>2yy7_A L-threonine dehydrogenase; thermolabIle, flavobacterium FRIG KUC-1, oxidoreductase; HET: PE8 NAD MES; 2.06A {Flavobacterium frigidimaris}

Probab=99.90  E-value=9.8e-24  Score=197.42  Aligned_cols=141  Identities=9%  Similarity=0.039  Sum_probs=103.5

Q ss_pred             CceEEEEeCCccccCCCC------C-CHHHHHHHHHcCCCCeeecCCCcceeceeHHHHHHHHHHHHhccccCCCCCCCC
Q 017760           72 CLYTCAVRPAAIYGPGEE------R-HLPRIVSLAKLGLVPFKIGEPSVKTDWIYVDNLVLALILASMGLLDDIPGQKGR  144 (366)
Q Consensus        72 ~l~~~ilRp~~iyGp~~~------~-~l~~~i~~~~~g~~~~~~g~~~~~~~~v~vdDla~a~~~a~~~l~~~~~~~~~~  144 (366)
                      +++++++||+.+|||+..      . ..+.+...+..+. ...++++++.++|+|++|+|++++.++++           
T Consensus       162 ~~~~~~lrp~~v~g~~~~~~~~~~~~~~~~~~~~~~~~~-~~~~~~~~~~~~~i~v~Dva~a~~~~~~~-----------  229 (312)
T 2yy7_A          162 GVDVRSIRYPGLISWSTPPGGGTTDYAVDIFYKAIADKK-YECFLSSETKMPMMYMDDAIDATINIMKA-----------  229 (312)
T ss_dssp             CCEEECEEECEEECSSSCCCSCTTTHHHHHHHHHHHTSE-EEESSCTTCCEEEEEHHHHHHHHHHHHHS-----------
T ss_pred             CCcEEEEeCCeEecCCCCCCCchhhhHHHHHHHHHcCCC-eEEecCCCceeeeeeHHHHHHHHHHHHhC-----------
Confidence            678999999999997532      1 2344445555554 45678888899999999999999999973           


Q ss_pred             CCC---CCccEEecCCCCCCHHHHHHHHHHhcCCCCCccccCHHHHHHHHHHHHHHHHhhhhccccccCCCCCCcHHhhh
Q 017760          145 PIA---SGQPYFVSDGFPINTFEFIGPLLKTLDYDLPKSWLAVPHALFLGKVFSFFYSVLYPWLNRWWLPQPLILPAEVY  221 (366)
Q Consensus       145 ~~~---~g~~y~I~~~~~vs~~e~~~~l~~~lg~~~~~~~lp~~~~~~~a~~~e~~~~~~~~~~~~~~~~~p~l~~~ev~  221 (366)
                      +..   .+++||+++ +++|+.|+++.+.+.+|. .+....                              |. .+.+..
T Consensus       230 ~~~~~~~~~~~ni~~-~~~s~~e~~~~i~~~~~~-~~i~~~------------------------------~~-~~~~~~  276 (312)
T 2yy7_A          230 PVEKIKIHSSYNLAA-MSFTPTEIANEIKKHIPE-FTITYE------------------------------PD-FRQKIA  276 (312)
T ss_dssp             CGGGCCCSSCEECCS-EEECHHHHHHHHHTTCTT-CEEEEC------------------------------CC-THHHHH
T ss_pred             cccccccCceEEeCC-CccCHHHHHHHHHHHCCC-CceEec------------------------------cC-cccccc
Confidence            222   258999996 789999999999999982 111111                              11 111111


Q ss_pred             hhcccceecHHHHHHhcCCCCCCChHHHHHHHHHHHH
Q 017760          222 KVGVTHYFSLLKAKDELCYVPIVSPREGMAATISYWQ  258 (366)
Q Consensus       222 ~~~~~~~~d~~ka~~~LG~~p~~~~~e~l~~~v~~~~  258 (366)
                       ...+..+|++|++++|||+|+++++++|+++++||+
T Consensus       277 -~~~~~~~d~~k~~~~lG~~p~~~l~~~l~~~~~~~k  312 (312)
T 2yy7_A          277 -DSWPASIDDSQAREDWDWKHTFDLESMTKDMIEHLS  312 (312)
T ss_dssp             -TTSCSSBCCHHHHHHHCCCCCCCHHHHHHHHHHHHC
T ss_pred             -ccccccCCHHHHHHHcCCCCCCCHHHHHHHHHHHhC
Confidence             112236899999999999999999999999999985

>1gy8_A UDP-galactose 4-epimerase; oxidoreductase; HET: NAD UDP; 2.0A {Trypanosoma brucei} SCOP: c.2.1.2 PDB: 2cnb_A*

Probab=99.90  E-value=1.2e-23  Score=203.53  Aligned_cols=150  Identities=17%  Similarity=0.086  Sum_probs=109.1

Q ss_pred             CceEEEEeCCccccCCC-----------CCCHHHHH----HHHHcCC------------CCeeec------CCCcceece
Q 017760           72 CLYTCAVRPAAIYGPGE-----------ERHLPRIV----SLAKLGL------------VPFKIG------EPSVKTDWI  118 (366)
Q Consensus        72 ~l~~~ilRp~~iyGp~~-----------~~~l~~~i----~~~~~g~------------~~~~~g------~~~~~~~~v  118 (366)
                      +++++++||+++|||+.           ..+++.++    ..+..+.            .+.++|      ++++.++|+
T Consensus       194 gi~~~ilRp~~v~G~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~g~~~~~~v  273 (397)
T 1gy8_A          194 GIKGICLRYFNACGAHEDGDIGEHYQGSTHLIPIILGRVMSDIAPDQRLTIHEDASTDKRMPIFGTDYPTPDGTCVRDYV  273 (397)
T ss_dssp             CCEEEEEEECEEECCCTTSSCSCCSTTCCSHHHHHHHHHHHHHSCC-----------CCCEEEECSCSSSTTSSCEECEE
T ss_pred             CCcEEEEeccceeCCCccccccccccchhHHHHHHHHHHHHHHHhcCccccccccccCCCceeecCcccCCCCCeeEeeE
Confidence            67899999999999973           23445444    2344443            345566      678899999


Q ss_pred             eHHHHHHHHHHHHhccccCCCCCCCCCCCCC---ccEEecCCCCCCHHHHHHHHHHhcCCCCCccccCHHHHHHHHHHHH
Q 017760          119 YVDNLVLALILASMGLLDDIPGQKGRPIASG---QPYFVSDGFPINTFEFIGPLLKTLDYDLPKSWLAVPHALFLGKVFS  195 (366)
Q Consensus       119 ~vdDla~a~~~a~~~l~~~~~~~~~~~~~~g---~~y~I~~~~~vs~~e~~~~l~~~lg~~~~~~~lp~~~~~~~a~~~e  195 (366)
                      ||+|+|++++.+++.....      .+...+   ++||+++++++|+.|+++.+.+.+|.+.+....|            
T Consensus       274 ~v~Dva~a~~~~l~~~~~~------~~~~~~~~~~~~ni~~~~~~s~~e~~~~i~~~~g~~~~~~~~~------------  335 (397)
T 1gy8_A          274 HVCDLASAHILALDYVEKL------GPNDKSKYFSVFNLGTSRGYSVREVIEVARKTTGHPIPVRECG------------  335 (397)
T ss_dssp             EHHHHHHHHHHHHHHHHTC------CTTTGGGSEEEEEESCSCCEEHHHHHHHHHHHHCCCCCEEEEC------------
T ss_pred             eHHHHHHHHHHHHhccccc------ccccccCCCcEEEeCCCCcccHHHHHHHHHHHhCCCCCeeeCC------------
Confidence            9999999999998731000      000013   7999999999999999999999999876543322            


Q ss_pred             HHHHhhhhccccccCCCCCCcHHhhhhhcccceecHHHHHHhcCCCCCC-ChHHHHHHHHHHHHhccc
Q 017760          196 FFYSVLYPWLNRWWLPQPLILPAEVYKVGVTHYFSLLKAKDELCYVPIV-SPREGMAATISYWQDRKR  262 (366)
Q Consensus       196 ~~~~~~~~~~~~~~~~~p~l~~~ev~~~~~~~~~d~~ka~~~LG~~p~~-~~~e~l~~~v~~~~~~~~  262 (366)
                                      ..   +.+    .....+|++|++++|||+|++ +++++|+++++||+++..
T Consensus       336 ----------------~~---~~~----~~~~~~d~~k~~~~lG~~p~~~~l~e~l~~~~~~~~~~~~  380 (397)
T 1gy8_A          336 ----------------RR---EGD----PAYLVAASDKAREVLGWKPKYDTLEAIMETSWKFQRTHPN  380 (397)
T ss_dssp             ----------------CC---TTC----CSEECBCCHHHHHHTCCCCSCCSHHHHHHHHHHHHHTCTT
T ss_pred             ----------------CC---CCc----ccccccCHHHHHHHhCCCCCcCCHHHHHHHHHHHHHhccc
Confidence                            10   000    113468999999999999999 999999999999988744

>2x6t_A ADP-L-glycero-D-manno-heptose-6-epimerase; isomerase, carbohydrate metabolism, stress response; HET: NAP ADP BMA; 2.36A {Escherichia coli} PDB: 2x86_A*

Probab=99.90  E-value=2.3e-23  Score=199.10  Aligned_cols=145  Identities=13%  Similarity=0.128  Sum_probs=113.3

Q ss_pred             CCCceEEEEeCCccccCCCC------CCHHHHHHHHHcCCCCeeecCCCc-ceeceeHHHHHHHHHHHHhccccCCCCCC
Q 017760           70 RKCLYTCAVRPAAIYGPGEE------RHLPRIVSLAKLGLVPFKIGEPSV-KTDWIYVDNLVLALILASMGLLDDIPGQK  142 (366)
Q Consensus        70 ~~~l~~~ilRp~~iyGp~~~------~~l~~~i~~~~~g~~~~~~g~~~~-~~~~v~vdDla~a~~~a~~~l~~~~~~~~  142 (366)
                      +.+++++++||+.+|||++.      ..++.++..+.++..+..+++++. .++|+|++|+|++++.+++.         
T Consensus       204 ~~g~~~~ilRp~~v~Gp~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~v~Dva~ai~~~~~~---------  274 (357)
T 2x6t_A          204 EANSQIVGFRYFNVYGPREGHKGSMASVAFHLNTQLNNGESPKLFEGSENFKRDFVYVGDVADVNLWFLEN---------  274 (357)
T ss_dssp             GCSSCEEEEEECEEESSSCTTCGGGSCHHHHHHHHHHTTCCCEEETTGGGCEECEEEHHHHHHHHHHHHHH---------
T ss_pred             HcCCCEEEEecCeEECCCCCCCcccchHHHHHHHHHHcCCCcEEeCCCCcceEccEEHHHHHHHHHHHHhc---------
Confidence            34789999999999999864      467788888888887777888888 89999999999999999973         


Q ss_pred             CCCCCCCccEEecCCCCCCHHHHHHHHHHhcCCCCCccccCHHHHHHHHHHHHHHHHhhhhccccccCCCCCCcHHhhhh
Q 017760          143 GRPIASGQPYFVSDGFPINTFEFIGPLLKTLDYDLPKSWLAVPHALFLGKVFSFFYSVLYPWLNRWWLPQPLILPAEVYK  222 (366)
Q Consensus       143 ~~~~~~g~~y~I~~~~~vs~~e~~~~l~~~lg~~~~~~~lp~~~~~~~a~~~e~~~~~~~~~~~~~~~~~p~l~~~ev~~  222 (366)
                        +.  +++||+++++++|+.|+++.+.+.+|.+ +...+|.                            |.   .....
T Consensus       275 --~~--~~~~~i~~~~~~s~~e~~~~i~~~~g~~-~~~~~~~----------------------------~~---~~~~~  318 (357)
T 2x6t_A          275 --GV--SGIFNLGTGRAESFQAVADATLAYHKKG-QIEYIPF----------------------------PD---KLKGR  318 (357)
T ss_dssp             --CC--CEEEEESCSCCEEHHHHHHHHHHHHTCC-CCEEECC----------------------------CG---GGTTS
T ss_pred             --CC--CCeEEecCCCcccHHHHHHHHHHHcCCC-CceecCC----------------------------Cc---ccccc
Confidence              22  7899999999999999999999999977 2222211                            10   00001


Q ss_pred             hcccceecHHHHHHhcCC-CCCCChHHHHHHHHHHHHhc
Q 017760          223 VGVTHYFSLLKAKDELCY-VPIVSPREGMAATISYWQDR  260 (366)
Q Consensus       223 ~~~~~~~d~~ka~~~LG~-~p~~~~~e~l~~~v~~~~~~  260 (366)
                      ......+|++|+++ ||| .|.++++++|+++++||+++
T Consensus       319 ~~~~~~~~~~k~~~-lG~~~~~~~l~e~l~~~~~~~~~~  356 (357)
T 2x6t_A          319 YQAFTQADLTNLRA-AGYDKPFKTVAEGVTEYMAWLNRD  356 (357)
T ss_dssp             CCSBCCCCCHHHHH-TTCCCCCCCHHHHHHHHHHHHC--
T ss_pred             cccccccCHHHHHH-cCCCCCCCCHHHHHHHHHHHHhhc
Confidence            11233678999987 999 78889999999999999753

>1eq2_A ADP-L-glycero-D-mannoheptose 6-epimerase; N-terminal domain rossmann fold, C-terminal mixed alpha/beta domain; HET: NAP ADQ; 2.00A {Escherichia coli} SCOP: c.2.1.2

Probab=99.90  E-value=1.2e-23  Score=196.47  Aligned_cols=145  Identities=13%  Similarity=0.147  Sum_probs=95.0

Q ss_pred             CCCceEEEEeCCccccCCCC------CCHHHHHHHHHcCCCCeeecCCCc-ceeceeHHHHHHHHHHHHhccccCCCCCC
Q 017760           70 RKCLYTCAVRPAAIYGPGEE------RHLPRIVSLAKLGLVPFKIGEPSV-KTDWIYVDNLVLALILASMGLLDDIPGQK  142 (366)
Q Consensus        70 ~~~l~~~ilRp~~iyGp~~~------~~l~~~i~~~~~g~~~~~~g~~~~-~~~~v~vdDla~a~~~a~~~l~~~~~~~~  142 (366)
                      ..+++++++||+.+|||++.      ..++.++..+.+|..+..+++++. .++|+|++|+|++++.+++.         
T Consensus       157 ~~g~~~~~lrp~~v~G~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~i~v~Dva~~~~~~~~~---------  227 (310)
T 1eq2_A          157 EANSQIVGFRYFNVYGPREGHKGSMASVAFHLNTQLNNGESPKLFEGSENFKRDFVYVGDVADVNLWFLEN---------  227 (310)
T ss_dssp             GCSSCEEEEEECEEESSSCGGGGGGSCHHHHHHHHHHC-------------CBCEEEHHHHHHHHHHHHHH---------
T ss_pred             HcCCCEEEEeCCcEECcCCCCCCccchHHHHHHHHHHcCCCcEEecCCCcceEccEEHHHHHHHHHHHHhc---------
Confidence            34789999999999999874      567888888888887777888888 99999999999999999973         


Q ss_pred             CCCCCCCccEEecCCCCCCHHHHHHHHHHhcCCCCCccccCHHHHHHHHHHHHHHHHhhhhccccccCCCCCCcHHhhhh
Q 017760          143 GRPIASGQPYFVSDGFPINTFEFIGPLLKTLDYDLPKSWLAVPHALFLGKVFSFFYSVLYPWLNRWWLPQPLILPAEVYK  222 (366)
Q Consensus       143 ~~~~~~g~~y~I~~~~~vs~~e~~~~l~~~lg~~~~~~~lp~~~~~~~a~~~e~~~~~~~~~~~~~~~~~p~l~~~ev~~  222 (366)
                        +.  +++||+++++++|+.|+++.+.+.+|.+ +...+|.+.                           ..    ...
T Consensus       228 --~~--~~~~~i~~~~~~s~~e~~~~i~~~~g~~-~~~~~~~~~---------------------------~~----~~~  271 (310)
T 1eq2_A          228 --GV--SGIFNLGTGRAESFQAVADATLAYHKKG-QIEYIPFPD---------------------------KL----KGR  271 (310)
T ss_dssp             --CC--CEEEEESCSCCBCHHHHHHHC-----------------------------------------------------
T ss_pred             --CC--CCeEEEeCCCccCHHHHHHHHHHHcCCC-CceeCCCCh---------------------------hh----hcc
Confidence              22  7899999999999999999999999976 222222110                           00    000


Q ss_pred             hcccceecHHHHHHhcCC-CCCCChHHHHHHHHHHHHhc
Q 017760          223 VGVTHYFSLLKAKDELCY-VPIVSPREGMAATISYWQDR  260 (366)
Q Consensus       223 ~~~~~~~d~~ka~~~LG~-~p~~~~~e~l~~~v~~~~~~  260 (366)
                      ......+|++|+++ +|| +|.++++++|+++++||+++
T Consensus       272 ~~~~~~~~~~~~~~-lG~~~~~~~l~~~l~~~~~~~~~~  309 (310)
T 1eq2_A          272 YQAFTQADLTNLRA-AGYDKPFKTVAEGVTEYMAWLNRD  309 (310)
T ss_dssp             CCCSCCBCCHHHHH-TTCCCCCCCHHHHHHHHHHHTC--
T ss_pred             cccccccchHHHHh-cCCCCCCCCHHHHHHHHHHHHHhc
Confidence            11223578999986 999 78889999999999999753

>1n7h_A GDP-D-mannose-4,6-dehydratase; rossmann fold, SDR, short-chain dehydrogenase/reductase, LYA; HET: NDP GDP; 1.80A {Arabidopsis thaliana} SCOP: c.2.1.2 PDB: 1n7g_A*

Probab=99.90  E-value=7.9e-23  Score=197.00  Aligned_cols=147  Identities=20%  Similarity=0.215  Sum_probs=109.7

Q ss_pred             CceEEEEeCCccccCCCCC-C----HHHHHHHHHcCCC-CeeecCCCcceeceeHHHHHHHHHHHHhccccCCCCCCCCC
Q 017760           72 CLYTCAVRPAAIYGPGEER-H----LPRIVSLAKLGLV-PFKIGEPSVKTDWIYVDNLVLALILASMGLLDDIPGQKGRP  145 (366)
Q Consensus        72 ~l~~~ilRp~~iyGp~~~~-~----l~~~i~~~~~g~~-~~~~g~~~~~~~~v~vdDla~a~~~a~~~l~~~~~~~~~~~  145 (366)
                      +++++++|++++|||+... .    +..++..+.+|.. ...+|+++..++|+|++|+|++++.+++           .+
T Consensus       204 ~~~~~~~r~~~~~gp~~~~~~~~~~~~~~~~~~~~g~~~~~~~g~~~~~~~~v~v~Dva~a~~~~~~-----------~~  272 (381)
T 1n7h_A          204 GLFACNGILFNHESPRRGENFVTRKITRALGRIKVGLQTKLFLGNLQASRDWGFAGDYVEAMWLMLQ-----------QE  272 (381)
T ss_dssp             CCEEEEEEECCEECTTSCTTSHHHHHHHHHHHHHHTSCCCEEESCTTCEEECEEHHHHHHHHHHHHT-----------SS
T ss_pred             CCcEEEEEeCceeCCCCCCcchhHHHHHHHHHHHcCCCCeEEeCCCCceeeeEEHHHHHHHHHHHHh-----------CC
Confidence            5678899999999998642 3    3444555566653 3457888899999999999999999996           22


Q ss_pred             CCCCccEEecCCCCCCHHHHHHHHHHhcCCCCCc-cccCHHHHHHHHHHHHHHHHhhhhccccccCCCCCCcHHhhhhhc
Q 017760          146 IASGQPYFVSDGFPINTFEFIGPLLKTLDYDLPK-SWLAVPHALFLGKVFSFFYSVLYPWLNRWWLPQPLILPAEVYKVG  224 (366)
Q Consensus       146 ~~~g~~y~I~~~~~vs~~e~~~~l~~~lg~~~~~-~~lp~~~~~~~a~~~e~~~~~~~~~~~~~~~~~p~l~~~ev~~~~  224 (366)
                        .+++||+++++++|+.|+++.+.+.+|.+.+. ..+                            ......+.+.    
T Consensus       273 --~~~~~~i~~~~~~s~~e~~~~i~~~~g~~~~~~~~~----------------------------~~~~~~~~~~----  318 (381)
T 1n7h_A          273 --KPDDYVVATEEGHTVEEFLDVSFGYLGLNWKDYVEI----------------------------DQRYFRPAEV----  318 (381)
T ss_dssp             --SCCEEEECCSCEEEHHHHHHHHHHHTTCCGGGTEEE----------------------------CGGGSCSSCC----
T ss_pred             --CCCeEEeeCCCCCcHHHHHHHHHHHcCCCccccccc----------------------------CcccCCcccc----
Confidence              24799999999999999999999999975321 111                            0000111111    


Q ss_pred             ccceecHHHHHHhcCCCCCCChHHHHHHHHHHHHhcccc
Q 017760          225 VTHYFSLLKAKDELCYVPIVSPREGMAATISYWQDRKRK  263 (366)
Q Consensus       225 ~~~~~d~~ka~~~LG~~p~~~~~e~l~~~v~~~~~~~~~  263 (366)
                      ....+|++|++++|||+|+++++++|+++++||+++...
T Consensus       319 ~~~~~d~~k~~~~lG~~p~~~l~e~l~~~~~~~~~~~~~  357 (381)
T 1n7h_A          319 DNLQGDASKAKEVLGWKPQVGFEKLVKMMVDEDLELAKR  357 (381)
T ss_dssp             CBCCBCCHHHHHHHCCCCCSCHHHHHHHHHHHHHHHHHH
T ss_pred             ccccCCHHHHHHhcCCcccCCHHHHHHHHHHHHHhhccc
Confidence            123579999999999999999999999999999886543

>2z1m_A GDP-D-mannose dehydratase; short-chain dehydrogenase/reductase, lyase, structural genom NPPSFA; HET: NDP GDP; 2.00A {Aquifex aeolicus} PDB: 2z95_A*

Probab=99.90  E-value=3.5e-23  Score=196.10  Aligned_cols=225  Identities=22%  Similarity=0.216  Sum_probs=151.1

Q ss_pred             cCCeEEEEcCCChhHHHHHHHHHHcCCceEEEEecCCCCccccc---c-cCCCeEEEEcc--------------------
Q 017760           10 EGKTFLVTGGLGHVGSALCLELVRRGAYQVRAFDLRTNSPWSHL---L-INHGVHCIQGL--------------------   65 (366)
Q Consensus        10 ~~~~VlITGgtGfiG~~L~~~L~~~g~~~V~~~dr~~~~~~~~~---~-~~~~v~~i~gD--------------------   65 (366)
                      ++|+|+||||+||+|+++++.|+++| ++|++++|++.......   . ...+++++.+|                    
T Consensus         2 ~~~~vlVtGatG~iG~~l~~~L~~~G-~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~Dl~d~~~~~~~~~~~~~d~vi   80 (345)
T 2z1m_A            2 SGKRALITGIRGQDGAYLAKLLLEKG-YEVYGADRRSGEFASWRLKELGIENDVKIIHMDLLEFSNIIRTIEKVQPDEVY   80 (345)
T ss_dssp             -CCEEEEETTTSHHHHHHHHHHHHTT-CEEEEECSCCSTTTTHHHHHTTCTTTEEECCCCTTCHHHHHHHHHHHCCSEEE
T ss_pred             CCCEEEEECCCChHHHHHHHHHHHCC-CEEEEEECCCcccccccHhhccccCceeEEECCCCCHHHHHHHHHhcCCCEEE
Confidence            46799999999999999999999999 59999999865321100   0 01245555555                    


Q ss_pred             --------------------------------------------------------------------------c-----
Q 017760           66 --------------------------------------------------------------------------R-----   66 (366)
Q Consensus        66 --------------------------------------------------------------------------k-----   66 (366)
                                                                                                |     
T Consensus        81 h~A~~~~~~~~~~~~~~~~~~Nv~g~~~l~~a~~~~~~~~~iv~~SS~~vyg~~~~~~~~e~~~~~~~~~Y~~sK~~~e~  160 (345)
T 2z1m_A           81 NLAAQSFVGVSFEQPILTAEVDAIGVLRILEALRTVKPDTKFYQASTSEMFGKVQEIPQTEKTPFYPRSPYAVAKLFGHW  160 (345)
T ss_dssp             ECCCCCCHHHHTTSHHHHHHHHTHHHHHHHHHHHHHCTTCEEEEEEEGGGGCSCSSSSBCTTSCCCCCSHHHHHHHHHHH
T ss_pred             ECCCCcchhhhhhCHHHHHHHHHHHHHHHHHHHHHhCCCceEEEEechhhcCCCCCCCCCccCCCCCCChhHHHHHHHHH
Confidence                                                                                      0     


Q ss_pred             ----cCCCCCceEEEEeCCccccCCCCC-CH----HHHHHHHHcCCC-CeeecCCCcceeceeHHHHHHHHHHHHhcccc
Q 017760           67 ----KNNRKCLYTCAVRPAAIYGPGEER-HL----PRIVSLAKLGLV-PFKIGEPSVKTDWIYVDNLVLALILASMGLLD  136 (366)
Q Consensus        67 ----s~~~~~l~~~ilRp~~iyGp~~~~-~l----~~~i~~~~~g~~-~~~~g~~~~~~~~v~vdDla~a~~~a~~~l~~  136 (366)
                          ...+.+++++++|+.++|||+... .+    ..++..+..|.. ....++++..++|+|++|+|++++.+++    
T Consensus       161 ~~~~~~~~~~~~~~~~r~~~~~gpg~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~Dva~a~~~~~~----  236 (345)
T 2z1m_A          161 ITVNYREAYNMFACSGILFNHESPLRGIEFVTRKITYSLARIKYGLQDKLVLGNLNAKRDWGYAPEYVEAMWLMMQ----  236 (345)
T ss_dssp             HHHHHHHHHCCCEEEEEECCEECTTSCTTSHHHHHHHHHHHHHTTSCSCEEESCTTCEECCEEHHHHHHHHHHHHT----
T ss_pred             HHHHHHHHhCCceEeeeeeeecCCCCCCcchhHHHHHHHHHHHcCCCCeeeeCCCCceeeeEEHHHHHHHHHHHHh----
Confidence                011125667999999999998642 22    334445556653 3457888889999999999999999996    


Q ss_pred             CCCCCCCCCCCCCccEEecCCCCCCHHHHHHHHHHhcCCCCCcc--ccCHHHHHHHHHHHHHHHHhhhhccccccCCCCC
Q 017760          137 DIPGQKGRPIASGQPYFVSDGFPINTFEFIGPLLKTLDYDLPKS--WLAVPHALFLGKVFSFFYSVLYPWLNRWWLPQPL  214 (366)
Q Consensus       137 ~~~~~~~~~~~~g~~y~I~~~~~vs~~e~~~~l~~~lg~~~~~~--~lp~~~~~~~a~~~e~~~~~~~~~~~~~~~~~p~  214 (366)
                             .+  .+++||+++++++|+.|+++.+.+.+|.+.+..  .+|.+.+.  +       .+......  . ..+.
T Consensus       237 -------~~--~~~~~~i~~~~~~s~~e~~~~i~~~~g~~~~~~~~~~p~~~~~--~-------~~~~~~~~--~-~~~~  295 (345)
T 2z1m_A          237 -------QP--EPDDYVIATGETHTVREFVEKAAKIAGFDIEWVGEGINEKGID--R-------NTGKVIVE--V-SEEF  295 (345)
T ss_dssp             -------SS--SCCCEEECCSCCEEHHHHHHHHHHHTTCCEEEESCGGGCEEEE--T-------TTCCEEEE--E-CGGG
T ss_pred             -------CC--CCceEEEeCCCCccHHHHHHHHHHHhCCCcccccccccccccc--c-------cccccccc--c-Cccc
Confidence                   22  247999999999999999999999999764321  12211100  0       00000000  0 0000


Q ss_pred             CcHHhhhhhcccceecHHHHHHhcCCCCCCChHHHHHHHHHHHHhccccC
Q 017760          215 ILPAEVYKVGVTHYFSLLKAKDELCYVPIVSPREGMAATISYWQDRKRKS  264 (366)
Q Consensus       215 l~~~ev~~~~~~~~~d~~ka~~~LG~~p~~~~~e~l~~~v~~~~~~~~~~  264 (366)
                      ..+.+    .....+|++|++++|||+|+++++++++++++||+++.+.+
T Consensus       296 ~~~~~----~~~~~~d~~k~~~~lG~~p~~~~~~~l~~~~~~~~~~~~~~  341 (345)
T 2z1m_A          296 FRPAE----VDILVGNPEKAMKKLGWKPRTTFDELVEIMMEADLKRVRDR  341 (345)
T ss_dssp             SCSSC----CCBCCBCCHHHHHHHCCCCCSCHHHHHHHHHHHHHHHHHC-
T ss_pred             CCCCC----cceeecCHHHHHHHcCCcccCCHHHHHHHHHHHHHHHhccc
Confidence            11111    12235799999999999999999999999999998876544

>1z7e_A Protein aRNA; rossmann fold, OB-like fold, hydrolase; HET: ATP UGA; 3.00A {Escherichia coli} SCOP: b.46.1.1 c.2.1.2 c.65.1.1

Probab=99.90  E-value=3.4e-23  Score=213.74  Aligned_cols=221  Identities=16%  Similarity=0.146  Sum_probs=160.2

Q ss_pred             ccCCeEEEEcCCChhHHHHHHHHHHc-CCceEEEEecCCCCcccccccCCCeEEEEcc----------------------
Q 017760            9 IEGKTFLVTGGLGHVGSALCLELVRR-GAYQVRAFDLRTNSPWSHLLINHGVHCIQGL----------------------   65 (366)
Q Consensus         9 ~~~~~VlITGgtGfiG~~L~~~L~~~-g~~~V~~~dr~~~~~~~~~~~~~~v~~i~gD----------------------   65 (366)
                      +++++|+||||+||+|++++++|+++ | ++|++++|+..... ......+++++.+|                      
T Consensus       313 ~~~~~VLVTGatG~IG~~l~~~Ll~~~g-~~V~~~~r~~~~~~-~~~~~~~v~~v~~Dl~d~~~~~~~~~~~~D~Vih~A  390 (660)
T 1z7e_A          313 RRRTRVLILGVNGFIGNHLTERLLREDH-YEVYGLDIGSDAIS-RFLNHPHFHFVEGDISIHSEWIEYHVKKCDVVLPLV  390 (660)
T ss_dssp             -CCEEEEEETTTSHHHHHHHHHHHHSSS-EEEEEEESCCTTTG-GGTTCTTEEEEECCTTTCHHHHHHHHHHCSEEEECC
T ss_pred             ccCceEEEEcCCcHHHHHHHHHHHhcCC-CEEEEEEcCchhhh-hhccCCceEEEECCCCCcHHHHHHhhcCCCEEEECc
Confidence            45689999999999999999999998 8 59999999764321 11123456666666                      


Q ss_pred             -------------------------------c---------c--------------------------------------
Q 017760           66 -------------------------------R---------K--------------------------------------   67 (366)
Q Consensus        66 -------------------------------k---------s--------------------------------------   67 (366)
                                                     +         +                                      
T Consensus       391 a~~~~~~~~~~~~~~~~~Nv~gt~~ll~aa~~~~~r~V~~SS~~vyg~~~~~~~~E~~~~~~~~p~~~p~~~Y~~sK~~~  470 (660)
T 1z7e_A          391 AIATPIEYTRNPLRVFELDFEENLRIIRYCVKYRKRIIFPSTSEVYGMCSDKYFDEDHSNLIVGPVNKPRWIYSVSKQLL  470 (660)
T ss_dssp             CCCCTHHHHHSHHHHHHHHTHHHHHHHHHHHHTTCEEEEECCGGGGBTCCSSSBCTTTCCEEECCTTCTTHHHHHHHHHH
T ss_pred             eecCccccccCHHHHHHhhhHHHHHHHHHHHHhCCEEEEEecHHHcCCCCCcccCCCccccccCcccCCCCCcHHHHHHH
Confidence                                           0         0                                      


Q ss_pred             -------CCCCCceEEEEeCCccccCCCC----------CCHHHHHHHHHcCCCCeeecCCCcceeceeHHHHHHHHHHH
Q 017760           68 -------NNRKCLYTCAVRPAAIYGPGEE----------RHLPRIVSLAKLGLVPFKIGEPSVKTDWIYVDNLVLALILA  130 (366)
Q Consensus        68 -------~~~~~l~~~ilRp~~iyGp~~~----------~~l~~~i~~~~~g~~~~~~g~~~~~~~~v~vdDla~a~~~a  130 (366)
                             ....+++++++||+++|||+..          ..++.++..+.+|..+.+++++++.++|+|++|+|++++.+
T Consensus       471 E~~~~~~~~~~gi~~~ilRpg~v~Gp~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~g~g~~~~~~i~v~Dva~ai~~~  550 (660)
T 1z7e_A          471 DRVIWAYGEKEGLQFTLFRPFNWMGPRLDNLNAARIGSSRAITQLILNLVEGSPIKLIDGGKQKRCFTDIRDGIEALYRI  550 (660)
T ss_dssp             HHHHHHHHHHHCCCEEEEEECSEESTTSSCHHHHTTTCSCHHHHHHHHHHHTCCEEEEGGGCCEEECEEHHHHHHHHHHH
T ss_pred             HHHHHHHHHHcCCCEEEECCCcccCCCccccccccccccchHHHHHHHHHcCCCcEEeCCCCeEEEEEEHHHHHHHHHHH
Confidence                   0112577999999999999863          35678888888888777788888999999999999999999


Q ss_pred             HhccccCCCCCCCCCC--CCCccEEecCCC-CCCHHHHHHHHHHhcCCCCCccccCHHHHHHHHHHHHHHHHhhhhcccc
Q 017760          131 SMGLLDDIPGQKGRPI--ASGQPYFVSDGF-PINTFEFIGPLLKTLDYDLPKSWLAVPHALFLGKVFSFFYSVLYPWLNR  207 (366)
Q Consensus       131 ~~~l~~~~~~~~~~~~--~~g~~y~I~~~~-~vs~~e~~~~l~~~lg~~~~~~~lp~~~~~~~a~~~e~~~~~~~~~~~~  207 (366)
                      ++           .+.  ..|++||+++++ ++|+.|+++.+.+.+|.+.+...+|.+....                  
T Consensus       551 l~-----------~~~~~~~g~~~ni~~~~~~~s~~el~~~i~~~~g~~~~~~~~p~~~~~~------------------  601 (660)
T 1z7e_A          551 IE-----------NAGNRCDGEIINIGNPENEASIEELGEMLLASFEKHPLRHHFPPFAGFR------------------  601 (660)
T ss_dssp             HH-----------CGGGTTTTEEEEECCGGGEEEHHHHHHHHHHHHHHCTTGGGSCCCCCEE------------------
T ss_pred             Hh-----------CccccCCCeEEEECCCCCCcCHHHHHHHHHHHhcCCCcccccCcccccc------------------
Confidence            97           222  467899999986 8999999999999998765443333210000                  


Q ss_pred             ccCCCCCCcHHhhhhhcccceecHHHHHHhcCCCCCCChHHHHHHHHHHHHhccc
Q 017760          208 WWLPQPLILPAEVYKVGVTHYFSLLKAKDELCYVPIVSPREGMAATISYWQDRKR  262 (366)
Q Consensus       208 ~~~~~p~l~~~ev~~~~~~~~~d~~ka~~~LG~~p~~~~~e~l~~~v~~~~~~~~  262 (366)
                      .....+...  +.........+|++|++++|||+|+++++++|+++++||+++..
T Consensus       602 ~~~~~~~~~--~~~~~~~~~~~d~~ka~~~LG~~p~~~l~egl~~~i~~~~~~~~  654 (660)
T 1z7e_A          602 VVESSSYYG--KGYQDVEHRKPSIRNAHRCLDWEPKIDMQETIDETLDFFLRTVD  654 (660)
T ss_dssp             EECTHHHHC--TTCCCCSCCCBCCHHHHHHHCCCCCCCHHHHHHHHHHHHHTTSC
T ss_pred             chhcccccc--ccccchhhcccCHHHHHHhcCCCccCcHHHHHHHHHHHHHhhcc
Confidence            000000000  00001123468999999999999999999999999999987654

>2pzm_A Putative nucleotide sugar epimerase/ dehydratase; rossman fold, protein-NAD complex, protein-nucleotide comple binding protein; HET: NAD UDP; 2.00A {Bordetella bronchiseptica} PDB: 2pzl_A* 2pzk_A*

Probab=99.89  E-value=1.4e-22  Score=191.69  Aligned_cols=201  Identities=15%  Similarity=0.152  Sum_probs=149.6

Q ss_pred             cccccCCeEEEEcCCChhHHHHHHHHHHcCCceEEEEecCCCCccc--ccccCCCeEEEEcc------------------
Q 017760            6 NEGIEGKTFLVTGGLGHVGSALCLELVRRGAYQVRAFDLRTNSPWS--HLLINHGVHCIQGL------------------   65 (366)
Q Consensus         6 ~~~~~~~~VlITGgtGfiG~~L~~~L~~~g~~~V~~~dr~~~~~~~--~~~~~~~v~~i~gD------------------   65 (366)
                      .+.+++|+|+||||+||+|+++++.|+++| ++|++++|+......  ..+  .+++++.+|                  
T Consensus        15 ~~~~~~~~vlVTGasG~iG~~l~~~L~~~g-~~V~~~~r~~~~~~~~~~~l--~~v~~~~~Dl~d~~~~~~~~~~~~~D~   91 (330)
T 2pzm_A           15 VPRGSHMRILITGGAGCLGSNLIEHWLPQG-HEILVIDNFATGKREVLPPV--AGLSVIEGSVTDAGLLERAFDSFKPTH   91 (330)
T ss_dssp             CSTTTCCEEEEETTTSHHHHHHHHHHGGGT-CEEEEEECCSSSCGGGSCSC--TTEEEEECCTTCHHHHHHHHHHHCCSE
T ss_pred             cccCCCCEEEEECCCCHHHHHHHHHHHHCC-CEEEEEECCCccchhhhhcc--CCceEEEeeCCCHHHHHHHHhhcCCCE
Confidence            345667899999999999999999999999 599999996543210  000  233333333                  


Q ss_pred             ---------------------------------------------------c------------c--------------C
Q 017760           66 ---------------------------------------------------R------------K--------------N   68 (366)
Q Consensus        66 ---------------------------------------------------k------------s--------------~   68 (366)
                                                                         .            .              .
T Consensus        92 vih~A~~~~~~~~~~~~~~~N~~~~~~l~~a~~~~~~~~iV~~SS~~~~~~~~~~~~~~~E~~~~~~~Y~~sK~~~e~~~  171 (330)
T 2pzm_A           92 VVHSAAAYKDPDDWAEDAATNVQGSINVAKAASKAGVKRLLNFQTALCYGRPATVPIPIDSPTAPFTSYGISKTAGEAFL  171 (330)
T ss_dssp             EEECCCCCSCTTCHHHHHHHHTHHHHHHHHHHHHHTCSEEEEEEEGGGGCSCSSSSBCTTCCCCCCSHHHHHHHHHHHHH
T ss_pred             EEECCccCCCccccChhHHHHHHHHHHHHHHHHHcCCCEEEEecCHHHhCCCccCCCCcCCCCCCCChHHHHHHHHHHHH
Confidence                                                               0            0              0


Q ss_pred             CCCCceEEEEeCCccccCCCC-CCHHHHHHHHHcCCCCeeecCCCcceeceeHHHHHH-HHHHHHhccccCCCCCCCCCC
Q 017760           69 NRKCLYTCAVRPAAIYGPGEE-RHLPRIVSLAKLGLVPFKIGEPSVKTDWIYVDNLVL-ALILASMGLLDDIPGQKGRPI  146 (366)
Q Consensus        69 ~~~~l~~~ilRp~~iyGp~~~-~~l~~~i~~~~~g~~~~~~g~~~~~~~~v~vdDla~-a~~~a~~~l~~~~~~~~~~~~  146 (366)
                      ...+++.+++||+++|||+.. ..++.++..+..|.  ..++++. .++++|++|+|+ +++.+++           .+.
T Consensus       172 ~~~~~~~~~iR~~~v~gp~~~~~~~~~~~~~~~~~~--~~~~~~~-~~~~i~~~Dva~~a~~~~~~-----------~~~  237 (330)
T 2pzm_A          172 MMSDVPVVSLRLANVTGPRLAIGPIPTFYKRLKAGQ--KCFCSDT-VRDFLDMSDFLAIADLSLQE-----------GRP  237 (330)
T ss_dssp             HTCSSCEEEEEECEEECTTCCSSHHHHHHHHHHTTC--CCCEESC-EECEEEHHHHHHHHHHHTST-----------TCC
T ss_pred             HHcCCCEEEEeeeeeECcCCCCCHHHHHHHHHHcCC--EEeCCCC-EecceeHHHHHHHHHHHHhh-----------cCC
Confidence            001577999999999999873 45667777777776  4456666 899999999999 9999886           322


Q ss_pred             CCCccEEecCCCCCCHHHHHHHHHHhcCCCCCccccCHHHHHHHHHHHHHHHHhhhhccccccCCCCCCcHHhhhhhccc
Q 017760          147 ASGQPYFVSDGFPINTFEFIGPLLKTLDYDLPKSWLAVPHALFLGKVFSFFYSVLYPWLNRWWLPQPLILPAEVYKVGVT  226 (366)
Q Consensus       147 ~~g~~y~I~~~~~vs~~e~~~~l~~~lg~~~~~~~lp~~~~~~~a~~~e~~~~~~~~~~~~~~~~~p~l~~~ev~~~~~~  226 (366)
                        +++||+++++++|+.|+++.+.+.+|.+ +....|                            .+.    +    ...
T Consensus       238 --g~~~~v~~~~~~s~~e~~~~i~~~~g~~-~~~~~~----------------------------~~~----~----~~~  278 (330)
T 2pzm_A          238 --TGVFNVSTGEGHSIKEVFDVVLDYVGAT-LAEPVP----------------------------VVA----P----GAD  278 (330)
T ss_dssp             --CEEEEESCSCCEEHHHHHHHHHHHHTCC-CSSCCC----------------------------EEC----C----CTT
T ss_pred             --CCEEEeCCCCCCCHHHHHHHHHHHhCCC-CceeCC----------------------------CCc----c----hhh
Confidence              8899999999999999999999999987 433222                            110    1    122


Q ss_pred             ceecHHHH-----HHhcCCCCCCChHHHHHHHHHHHHhcccc
Q 017760          227 HYFSLLKA-----KDELCYVPIVSPREGMAATISYWQDRKRK  263 (366)
Q Consensus       227 ~~~d~~ka-----~~~LG~~p~~~~~e~l~~~v~~~~~~~~~  263 (366)
                      ..+|++|+     ++ |||+|.++++++|+++++||++++.-
T Consensus       279 ~~~d~~k~~~~~l~~-lG~~p~~~~~~~l~~~~~~~~~~~~~  319 (330)
T 2pzm_A          279 DVPSVVLDPSKTETE-FGWKAKVDFKDTITGQLAWYDKYGVT  319 (330)
T ss_dssp             SCSEECBCCHHHHHH-HCCCCCCCHHHHHHHHHHHHHHHCSC
T ss_pred             ccCCHHHHhhchHHH-cCCcccCCHHHHHHHHHHHHHhhCcc
Confidence            35788888     77 99999999999999999999886543

>2q1w_A Putative nucleotide sugar epimerase/ dehydratase; rossman fold, protein-NAD complex, sugar binding protein; HET: NAD; 2.19A {Bordetella bronchiseptica}

Probab=99.89  E-value=1.8e-22  Score=191.17  Aligned_cols=203  Identities=17%  Similarity=0.183  Sum_probs=148.9

Q ss_pred             cccCCeEEEEcCCChhHHHHHHHHHHcCCceEEEEecCCCCcccccccC-CCeEEEEcc---------------------
Q 017760            8 GIEGKTFLVTGGLGHVGSALCLELVRRGAYQVRAFDLRTNSPWSHLLIN-HGVHCIQGL---------------------   65 (366)
Q Consensus         8 ~~~~~~VlITGgtGfiG~~L~~~L~~~g~~~V~~~dr~~~~~~~~~~~~-~~v~~i~gD---------------------   65 (366)
                      ..+||+|+||||+||+|+++++.|+++| ++|++++|+..... ..+.. .+++++.+|                     
T Consensus        18 ~~~~~~vlVTGatG~iG~~l~~~L~~~g-~~V~~~~r~~~~~~-~~l~~~~~~~~~~~Dl~d~~~~~~~~~~~~~D~vih   95 (333)
T 2q1w_A           18 GSHMKKVFITGICGQIGSHIAELLLERG-DKVVGIDNFATGRR-EHLKDHPNLTFVEGSIADHALVNQLIGDLQPDAVVH   95 (333)
T ss_dssp             ---CCEEEEETTTSHHHHHHHHHHHHTT-CEEEEEECCSSCCG-GGSCCCTTEEEEECCTTCHHHHHHHHHHHCCSEEEE
T ss_pred             cCCCCEEEEeCCccHHHHHHHHHHHHCC-CEEEEEECCCccch-hhHhhcCCceEEEEeCCCHHHHHHHHhccCCcEEEE
Confidence            4567899999999999999999999999 59999999754321 11111 244455554                     


Q ss_pred             --------------------------------------------ccC----C---------CCC----------------
Q 017760           66 --------------------------------------------RKN----N---------RKC----------------   72 (366)
Q Consensus        66 --------------------------------------------ks~----~---------~~~----------------   72 (366)
                                                                  -..    .         ...                
T Consensus        96 ~A~~~~~~~~~~~~~~~N~~~~~~l~~a~~~~~~~~iV~~SS~~~~g~~~~~~~~~~~E~~~p~~~~Y~~sK~~~E~~~~  175 (333)
T 2q1w_A           96 TAASYKDPDDWYNDTLTNCVGGSNVVQAAKKNNVGRFVYFQTALCYGVKPIQQPVRLDHPRNPANSSYAISKSANEDYLE  175 (333)
T ss_dssp             CCCCCSCTTCHHHHHHHHTHHHHHHHHHHHHTTCSEEEEEEEGGGGCSCCCSSSBCTTSCCCCTTCHHHHHHHHHHHHHH
T ss_pred             CceecCCCccCChHHHHHHHHHHHHHHHHHHhCCCEEEEECcHHHhCCCcccCCCCcCCCCCCCCCchHHHHHHHHHHHH
Confidence                                                        001    1         001                


Q ss_pred             --c-eEEEEeCCccccCCCC-CCHHHHHHHHHcCCCCeeecCCCcceeceeHHHHHHHHHHHHhccccCCCCCCCCCCCC
Q 017760           73 --L-YTCAVRPAAIYGPGEE-RHLPRIVSLAKLGLVPFKIGEPSVKTDWIYVDNLVLALILASMGLLDDIPGQKGRPIAS  148 (366)
Q Consensus        73 --l-~~~ilRp~~iyGp~~~-~~l~~~i~~~~~g~~~~~~g~~~~~~~~v~vdDla~a~~~a~~~l~~~~~~~~~~~~~~  148 (366)
                        + +++++||+++|||+.. ..++.++..+..+.  ..++ ++..++++|++|+|++++.+++           .+.  
T Consensus       176 ~s~~~~~ilR~~~v~gp~~~~~~~~~~~~~~~~~~--~~~~-~~~~~~~i~v~Dva~ai~~~~~-----------~~~--  239 (333)
T 2q1w_A          176 YSGLDFVTFRLANVVGPRNVSGPLPIFFQRLSEGK--KCFV-TKARRDFVFVKDLARATVRAVD-----------GVG--  239 (333)
T ss_dssp             HHTCCEEEEEESEEESTTCCSSHHHHHHHHHHTTC--CCEE-EECEECEEEHHHHHHHHHHHHT-----------TCC--
T ss_pred             hhhCCeEEEeeceEECcCCcCcHHHHHHHHHHcCC--eeeC-CCceEeeEEHHHHHHHHHHHHh-----------cCC--
Confidence              2 6799999999999852 46777887777776  3455 6678999999999999999996           222  


Q ss_pred             CccEEecCCCCCCHHHHHHHHHHhcCCCCCccccCHHHHHHHHHHHHHHHHhhhhccccccCCCCCCcHHhhhhhcccce
Q 017760          149 GQPYFVSDGFPINTFEFIGPLLKTLDYDLPKSWLAVPHALFLGKVFSFFYSVLYPWLNRWWLPQPLILPAEVYKVGVTHY  228 (366)
Q Consensus       149 g~~y~I~~~~~vs~~e~~~~l~~~lg~~~~~~~lp~~~~~~~a~~~e~~~~~~~~~~~~~~~~~p~l~~~ev~~~~~~~~  228 (366)
                      +++||+++++++|+.|+++.+.+.+|.+ +...+|.+                           +    ........+..
T Consensus       240 g~~~~v~~~~~~s~~e~~~~i~~~~g~~-~~~~~~~~---------------------------~----~~~~~~~~~~~  287 (333)
T 2q1w_A          240 HGAYHFSSGTDVAIKELYDAVVEAMALP-SYPEPEIR---------------------------E----LGPDDAPSILL  287 (333)
T ss_dssp             CEEEECSCSCCEEHHHHHHHHHHHTTCS-SCCCCEEE---------------------------E----CCTTSCCCCCB
T ss_pred             CCEEEeCCCCCccHHHHHHHHHHHhCCC-CceeCCCC---------------------------C----ccccccccccc
Confidence            8899999999999999999999999987 43322210                           0    00111223457


Q ss_pred             ecHHHHHHhcCCCCCCChHHHHHHHHHHHHhcc
Q 017760          229 FSLLKAKDELCYVPIVSPREGMAATISYWQDRK  261 (366)
Q Consensus       229 ~d~~ka~~~LG~~p~~~~~e~l~~~v~~~~~~~  261 (366)
                      +|++|++++ ||+|.++++++|+++++||++++
T Consensus       288 ~d~~k~~~~-G~~p~~~~~~~l~~~~~~~~~~~  319 (333)
T 2q1w_A          288 DPSRTIQDF-GKIEFTPLKETVAAAVAYFREYG  319 (333)
T ss_dssp             CCHHHHHHH-CCCCCCCHHHHHHHHHHHHHHHC
T ss_pred             CCHHHHHhc-CCCcCCCHHHHHHHHHHHHHHHC
Confidence            899999998 99999999999999999998775

>1z45_A GAL10 bifunctional protein; epimerase, mutarotase, metabolism, isomerase; HET: GAL NAD GUD; 1.85A {Saccharomyces cerevisiae} SCOP: b.30.5.4 c.2.1.2

Probab=99.89  E-value=9e-23  Score=211.94  Aligned_cols=222  Identities=20%  Similarity=0.189  Sum_probs=147.9

Q ss_pred             CCccccccccCCeEEEEcCCChhHHHHHHHHHHcCCceEEEEecCCCCccc-----ccccCCCeEEEEcc----------
Q 017760            1 MHLSENEGIEGKTFLVTGGLGHVGSALCLELVRRGAYQVRAFDLRTNSPWS-----HLLINHGVHCIQGL----------   65 (366)
Q Consensus         1 m~~~~~~~~~~~~VlITGgtGfiG~~L~~~L~~~g~~~V~~~dr~~~~~~~-----~~~~~~~v~~i~gD----------   65 (366)
                      |..+..+.+++++|+||||+||||+++++.|+++| ++|++++|+......     ......+++++++|          
T Consensus         1 m~~~~~~~~~~~~ilVTGatG~IG~~l~~~L~~~G-~~V~~~~r~~~~~~~~~~~l~~~~~~~v~~v~~Dl~d~~~l~~~   79 (699)
T 1z45_A            1 MTAQLQSESTSKIVLVTGGAGYIGSHTVVELIENG-YDCVVADNLSNSTYDSVARLEVLTKHHIPFYEVDLCDRKGLEKV   79 (699)
T ss_dssp             ----------CCEEEEETTTSHHHHHHHHHHHHTT-CEEEEEECCSSCCTHHHHHHHHHHTSCCCEEECCTTCHHHHHHH
T ss_pred             CCcccccccCCCEEEEECCCCHHHHHHHHHHHHCc-CEEEEEECCCcchHHHHHHHhhccCCceEEEEcCCCCHHHHHHH
Confidence            44444445667899999999999999999999999 599999987543210     00112344455555          


Q ss_pred             -------------------------------------------------------------c------------------
Q 017760           66 -------------------------------------------------------------R------------------   66 (366)
Q Consensus        66 -------------------------------------------------------------k------------------   66 (366)
                                                                                   .                  
T Consensus        80 ~~~~~~D~Vih~A~~~~~~~~~~~~~~~~~~Nv~gt~~ll~a~~~~~~~~iV~~SS~~vyg~~~~~~~~~~~~E~~~~~p  159 (699)
T 1z45_A           80 FKEYKIDSVIHFAGLKAVGESTQIPLRYYHNNILGTVVLLELMQQYNVSKFVFSSSATVYGDATRFPNMIPIPEECPLGP  159 (699)
T ss_dssp             HHHSCCCEEEECCSCCCHHHHHHSHHHHHHHHHHHHHHHHHHHHHHTCCEEEEEEEGGGGCCGGGSTTCCSBCTTSCCCC
T ss_pred             HHhCCCCEEEECCcccCcCccccCHHHHHHHHHHHHHHHHHHHHHcCCCEEEEECcHHHhCCCccccccCCccccCCCCC
Confidence                                                                         0                  


Q ss_pred             -c----------------CC--CCCceEEEEeCCccccCCCC------------CCHHHHHHHHHc-CCCCeeec-----
Q 017760           67 -K----------------NN--RKCLYTCAVRPAAIYGPGEE------------RHLPRIVSLAKL-GLVPFKIG-----  109 (366)
Q Consensus        67 -s----------------~~--~~~l~~~ilRp~~iyGp~~~------------~~l~~~i~~~~~-g~~~~~~g-----  109 (366)
                       +                ..  ..+++++++||+++|||+..            .+++.+...+.. +..+.++|     
T Consensus       160 ~~~Y~~sK~~~E~~~~~~~~~~~~g~~~~ilR~~~vyG~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~  239 (699)
T 1z45_A          160 TNPYGHTKYAIENILNDLYNSDKKSWKFAILRYFNPIGAHPSGLIGEDPLGIPNNLLPYMAQVAVGRREKLYIFGDDYDS  239 (699)
T ss_dssp             CSHHHHHHHHHHHHHHHHHHHSTTSCEEEEEEECEEECCCTTSSCCCCCSSSCCSHHHHHHHHHTTSSSCCCCC------
T ss_pred             CChHHHHHHHHHHHHHHHHHhccCCCcEEEEEeccccCCCcccccccccccchhHHHHHHHHHHhcCCCceEEeCCcccC
Confidence             0                00  15789999999999998631            234444443332 23445555     


Q ss_pred             -CCCcceeceeHHHHHHHHHHHHhccccCCCCCCCCCCCCCccEEecCCCCCCHHHHHHHHHHhcCCCCCccccCHHHHH
Q 017760          110 -EPSVKTDWIYVDNLVLALILASMGLLDDIPGQKGRPIASGQPYFVSDGFPINTFEFIGPLLKTLDYDLPKSWLAVPHAL  188 (366)
Q Consensus       110 -~~~~~~~~v~vdDla~a~~~a~~~l~~~~~~~~~~~~~~g~~y~I~~~~~vs~~e~~~~l~~~lg~~~~~~~lp~~~~~  188 (366)
                       ++++.++|+||+|+|++++.+++.....     ......+++||+++++++|+.|+++.+++.+|.+.+....|.    
T Consensus       240 ~~g~~~~~~i~v~Dva~a~~~a~~~~~~~-----~~~~~~~~~yni~~~~~~s~~el~~~i~~~~g~~~~~~~~~~----  310 (699)
T 1z45_A          240 RDGTPIRDYIHVVDLAKGHIAALQYLEAY-----NENEGLCREWNLGSGKGSTVFEVYHAFCKASGIDLPYKVTGR----  310 (699)
T ss_dssp             CCSSCEECEEEHHHHHHHHHHHHHHHHHS-----CTTCCEEEEEEESCSCCEEHHHHHHHHHHHHTCCCCC---------
T ss_pred             CCCCeeEeeEEHHHHHHHHHHHHhhhhcc-----ccccCCceEEEECCCCCCcHHHHHHHHHHHhCCCCCceecCC----
Confidence             6788999999999999999998632110     001223579999999999999999999999998755322110    


Q ss_pred             HHHHHHHHHHHhhhhccccccCCCCCCcHHhhhhhcccceecHHHHHHhcCCCCCCChHHHHHHHHHHHHhcccc
Q 017760          189 FLGKVFSFFYSVLYPWLNRWWLPQPLILPAEVYKVGVTHYFSLLKAKDELCYVPIVSPREGMAATISYWQDRKRK  263 (366)
Q Consensus       189 ~~a~~~e~~~~~~~~~~~~~~~~~p~l~~~ev~~~~~~~~~d~~ka~~~LG~~p~~~~~e~l~~~v~~~~~~~~~  263 (366)
                                              .   ..+    .....+|++|++++|||+|+++++++|+++++||+++...
T Consensus       311 ------------------------~---~~~----~~~~~~d~~ka~~~LG~~p~~~l~egl~~~~~w~~~~~~~  354 (699)
T 1z45_A          311 ------------------------R---AGD----VLNLTAKPDRAKRELKWQTELQVEDSCKDLWKWTTENPFG  354 (699)
T ss_dssp             -----------------------------------CCCCCBCCHHHHHHTCCCCCCCHHHHHHHHHHHHHHCTTC
T ss_pred             ------------------------C---CCc----cccccCCHHHHHHhcCCCCCCCHHHHHHHHHHHHHhCCcc
Confidence                                    0   001    1134689999999999999999999999999999876543

>1kew_A RMLB;, DTDP-D-glucose 4,6-dehydratase; rossmann fold, lyase; HET: TYD NAD; 1.80A {Salmonella enterica subsp} SCOP: c.2.1.2 PDB: 1g1a_A* 1keu_A* 1bxk_A*

Probab=99.89  E-value=1.4e-22  Score=193.47  Aligned_cols=151  Identities=19%  Similarity=0.249  Sum_probs=116.1

Q ss_pred             CceEEEEeCCccccCCCC--CCHHHHHHHHHcCCCCeeecCCCcceeceeHHHHHHHHHHHHhccccCCCCCCCCCCCCC
Q 017760           72 CLYTCAVRPAAIYGPGEE--RHLPRIVSLAKLGLVPFKIGEPSVKTDWIYVDNLVLALILASMGLLDDIPGQKGRPIASG  149 (366)
Q Consensus        72 ~l~~~ilRp~~iyGp~~~--~~l~~~i~~~~~g~~~~~~g~~~~~~~~v~vdDla~a~~~a~~~l~~~~~~~~~~~~~~g  149 (366)
                      +++++++||+.||||+..  ..++.++..+.+|..+.++++++..++++|++|+|++++.+++.            ...|
T Consensus       186 gi~~~~vrp~~v~G~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~v~Dva~a~~~~~~~------------~~~g  253 (361)
T 1kew_A          186 GLPTIVTNCSNNYGPYHFPEKLIPLVILNALEGKPLPIYGKGDQIRDWLYVEDHARALHMVVTE------------GKAG  253 (361)
T ss_dssp             CCCEEEEEECEEESTTCCTTSHHHHHHHHHHHTCCEEEETTSCCEEEEEEHHHHHHHHHHHHHH------------CCTT
T ss_pred             CCcEEEEeeceeECCCCCcccHHHHHHHHHHcCCCceEcCCCceeEeeEEHHHHHHHHHHHHhC------------CCCC
Confidence            456899999999999874  45677888888888777789999999999999999999999863            2467


Q ss_pred             ccEEecCCCCCCHHHHHHHHHHhcCCCCCccccCHHHHHHHHHHHHHHHHhhhhccccccCCCCCCcHHhhhhhccccee
Q 017760          150 QPYFVSDGFPINTFEFIGPLLKTLDYDLPKSWLAVPHALFLGKVFSFFYSVLYPWLNRWWLPQPLILPAEVYKVGVTHYF  229 (366)
Q Consensus       150 ~~y~I~~~~~vs~~e~~~~l~~~lg~~~~~~~lp~~~~~~~a~~~e~~~~~~~~~~~~~~~~~p~l~~~ev~~~~~~~~~  229 (366)
                      ++||+++++++|+.|+++.+.+.+|.+.+... |..             ...      .+.+..   +.    ......+
T Consensus       254 ~~~~v~~~~~~s~~e~~~~i~~~~g~~~~~~~-p~~-------------~~~------~~~~~~---~~----~~~~~~~  306 (361)
T 1kew_A          254 ETYNIGGHNEKKNLDVVFTICDLLDEIVPKAT-SYR-------------EQI------TYVADR---PG----HDRRYAI  306 (361)
T ss_dssp             CEEEECCCCEEEHHHHHHHHHHHHHHHSCCSS-CGG-------------GGE------EEECCC---TT----CCCBCCB
T ss_pred             CEEEecCCCeeeHHHHHHHHHHHhCCcCcccc-ccc-------------cce------eecCCC---Cc----ccceeec
Confidence            89999999999999999999999986544321 210             000      000110   00    0123368


Q ss_pred             cHHHHHHhcCCCCCCChHHHHHHHHHHHHhcc
Q 017760          230 SLLKAKDELCYVPIVSPREGMAATISYWQDRK  261 (366)
Q Consensus       230 d~~ka~~~LG~~p~~~~~e~l~~~v~~~~~~~  261 (366)
                      |++|++++|||+|.++++++|+++++||+++.
T Consensus       307 d~~k~~~~lG~~p~~~~~e~l~~~~~~~~~~~  338 (361)
T 1kew_A          307 DAGKISRELGWKPLETFESGIRKTVEWYLANT  338 (361)
T ss_dssp             CCHHHHHHHCCCCSCCHHHHHHHHHHHHHHCH
T ss_pred             CHHHHHHHhCCCCccCHHHHHHHHHHHHHhcc
Confidence            99999999999999999999999999998753

>1n2s_A DTDP-4-, DTDP-glucose oxidoreductase; rossman-fold, sugar-nucleotide-binding domain; HET: NAD; 2.00A {Salmonella enterica subsp} SCOP: c.2.1.2 PDB: 1kc1_A* 1kc3_A* 1kbz_A*

Probab=99.88  E-value=1.3e-23  Score=195.46  Aligned_cols=151  Identities=9%  Similarity=-0.077  Sum_probs=112.0

Q ss_pred             eEEEEeCCccccCCCCCCHHHHHHHHHcCCCCeeecCCCcceeceeHHHHHHHHHHHHhccccCCCCCCCCC-CC-CCcc
Q 017760           74 YTCAVRPAAIYGPGEERHLPRIVSLAKLGLVPFKIGEPSVKTDWIYVDNLVLALILASMGLLDDIPGQKGRP-IA-SGQP  151 (366)
Q Consensus        74 ~~~ilRp~~iyGp~~~~~l~~~i~~~~~g~~~~~~g~~~~~~~~v~vdDla~a~~~a~~~l~~~~~~~~~~~-~~-~g~~  151 (366)
                      +++++||+.+|||++..+++.++..+..|..+...|+  +.++|+|++|+|++++.+++.          .. .. .+++
T Consensus       145 ~~~ilRp~~v~G~~~~~~~~~~~~~~~~~~~~~~~~~--~~~~~i~v~Dva~~~~~~~~~----------~~~~~~~~~~  212 (299)
T 1n2s_A          145 KHLIFRTSWVYAGKGNNFAKTMLRLAKERQTLSVIND--QYGAPTGAELLADCTAHAIRV----------ALNKPEVAGL  212 (299)
T ss_dssp             SEEEEEECSEECSSSCCHHHHHHHHHHHCSEEEEECS--CEECCEEHHHHHHHHHHHHHH----------HHHCGGGCEE
T ss_pred             CeEEEeeeeecCCCcCcHHHHHHHHHhcCCCEEeecC--cccCCeeHHHHHHHHHHHHHH----------hccccccCce
Confidence            7999999999999887778888888888876666664  789999999999999999973          11 12 4789


Q ss_pred             EEecCCCCCCHHHHHHHHHHhcCCCCCccccCHHHHHHHHHHHHHHHHhhhhccccccCCCCCCcHHhhhhhcccceecH
Q 017760          152 YFVSDGFPINTFEFIGPLLKTLDYDLPKSWLAVPHALFLGKVFSFFYSVLYPWLNRWWLPQPLILPAEVYKVGVTHYFSL  231 (366)
Q Consensus       152 y~I~~~~~vs~~e~~~~l~~~lg~~~~~~~lp~~~~~~~a~~~e~~~~~~~~~~~~~~~~~p~l~~~ev~~~~~~~~~d~  231 (366)
                      ||+++++++|+.|+++.+.+.+|.+.+...+|..                      ...+...+..  .........+|+
T Consensus       213 ~~i~~~~~~s~~e~~~~i~~~~g~~~~~~~~~~~----------------------~~~~~~~~~~--~~~~~~~~~~d~  268 (299)
T 1n2s_A          213 YHLVAGGTTTWHDYAALVFDEARKAGITLALTEL----------------------NAVPTSAYPT--PASRPGNSRLNT  268 (299)
T ss_dssp             EECCCBSCEEHHHHHHHHHHHHHHHTCCCCCCEE----------------------EEECSTTSCC--SSCCCSBCCBCC
T ss_pred             EEEeCCCCCCHHHHHHHHHHHhCCCccccccccc----------------------cccccccccC--cCCCCCceeeeH
Confidence            9999999999999999999999876432111100                      0000000000  000112347899


Q ss_pred             HHHHHhcCCCCCCChHHHHHHHHHHHHhcc
Q 017760          232 LKAKDELCYVPIVSPREGMAATISYWQDRK  261 (366)
Q Consensus       232 ~ka~~~LG~~p~~~~~e~l~~~v~~~~~~~  261 (366)
                      +|++++|||+|+ +++++|+++++||+++.
T Consensus       269 ~k~~~~lG~~p~-~~~~~l~~~~~~~~~~~  297 (299)
T 1n2s_A          269 EKFQRNFDLILP-QWELGVKRMLTEMFTTT  297 (299)
T ss_dssp             HHHHHHHTCCCC-BHHHHHHHHHHHHHSCC
T ss_pred             HHHHHhcCCCCC-CHHHHHHHHHHHHHhcC
Confidence            999999999998 89999999999998653

>3ajr_A NDP-sugar epimerase; L-threonine dehydrogenase, L-3- hydroxynorvaline, oxidoreductase; HET: NAD; 1.77A {Thermoplasma volcanium} PDB: 3a9w_A* 3a4v_A* 3a1n_A*

Probab=99.88  E-value=5.2e-22  Score=186.22  Aligned_cols=148  Identities=10%  Similarity=0.020  Sum_probs=105.5

Q ss_pred             CceEEEEeCCccccCCCC------C-CHHHHHHHHHcCCCCeeecCCCcceeceeHHHHHHHHHHHHhccccCCCCCCCC
Q 017760           72 CLYTCAVRPAAIYGPGEE------R-HLPRIVSLAKLGLVPFKIGEPSVKTDWIYVDNLVLALILASMGLLDDIPGQKGR  144 (366)
Q Consensus        72 ~l~~~ilRp~~iyGp~~~------~-~l~~~i~~~~~g~~~~~~g~~~~~~~~v~vdDla~a~~~a~~~l~~~~~~~~~~  144 (366)
                      +++++++||+++||++..      . ..+.+...+..+. ...+++++..++|+|++|+|++++.+++.          .
T Consensus       156 ~~~~~~lR~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~-~~~~~~~~~~~~~i~v~Dva~a~~~~l~~----------~  224 (317)
T 3ajr_A          156 GLDVRSLRYPGIISYKAEPTAGTTDYAVEIFYYAVKREK-YKCYLAPNRALPMMYMPDALKALVDLYEA----------D  224 (317)
T ss_dssp             CCEEEEEEECEEECSSSCCCSCSSTHHHHHHHHHHTTCC-EEECSCTTCCEEEEEHHHHHHHHHHHHHC----------C
T ss_pred             CCeEEEEecCcEeccCCCCCCcchhHHHHHHHHHHhCCC-ceeecCccceeeeeEHHHHHHHHHHHHhC----------C
Confidence            688999999999997531      1 2233444444444 45667788899999999999999999973          1


Q ss_pred             CC--CCCccEEecCCCCCCHHHHHHHHHHhcCCCCCccccCHHHHHHHHHHHHHHHHhhhhccccccCCCCCCcHHhhhh
Q 017760          145 PI--ASGQPYFVSDGFPINTFEFIGPLLKTLDYDLPKSWLAVPHALFLGKVFSFFYSVLYPWLNRWWLPQPLILPAEVYK  222 (366)
Q Consensus       145 ~~--~~g~~y~I~~~~~vs~~e~~~~l~~~lg~~~~~~~lp~~~~~~~a~~~e~~~~~~~~~~~~~~~~~p~l~~~ev~~  222 (366)
                      ..  ..+++||+++ +++|+.|+++.+.+.+|. .+....|                              . .+.... 
T Consensus       225 ~~~~~~g~~~~i~~-~~~s~~e~~~~i~~~~~~-~~i~~~~------------------------------~-~~~~~~-  270 (317)
T 3ajr_A          225 RDKLVLRNGYNVTA-YTFTPSELYSKIKERIPE-FEIEYKE------------------------------D-FRDKIA-  270 (317)
T ss_dssp             GGGCSSCSCEECCS-EEECHHHHHHHHHTTCCS-CCEEECC------------------------------C-HHHHHH-
T ss_pred             ccccccCceEecCC-ccccHHHHHHHHHHHCCc-ccccccc------------------------------c-cchhhc-
Confidence            11  1358999986 579999999999999882 2211111                              0 011110 


Q ss_pred             hcccceecHHHHHHhcCCCCCCChHHHHHHHHHHHHhccccC
Q 017760          223 VGVTHYFSLLKAKDELCYVPIVSPREGMAATISYWQDRKRKS  264 (366)
Q Consensus       223 ~~~~~~~d~~ka~~~LG~~p~~~~~e~l~~~v~~~~~~~~~~  264 (366)
                      ...+..+|++|++++|||+|+++++++++++++||+++...+
T Consensus       271 ~~~~~~~d~~k~~~~lG~~p~~~~~~~l~~~~~~~~~~~~~~  312 (317)
T 3ajr_A          271 ATWPESLDSSEASNEWGFSIEYDLDRTIDDMIDHISEKLGIE  312 (317)
T ss_dssp             TTSCSCBCCHHHHHHHCCCCCCCHHHHHHHHHHHHHHHTTSS
T ss_pred             cccccccCHHHHHHHcCCCCCCCHHHHHHHHHHHHHhhhccc
Confidence            112236899999999999999999999999999998865544

>1vl0_A DTDP-4-dehydrorhamnose reductase, RFBD ortholog; structural joint center for structural genomics, JCSG, protein structu initiative; HET: NAI UNL; 2.05A {Clostridium acetobutylicum} SCOP: c.2.1.2

Probab=99.88  E-value=2e-23  Score=193.77  Aligned_cols=201  Identities=12%  Similarity=0.036  Sum_probs=145.6

Q ss_pred             CCeEEEEcCCChhHHHHHHHHHHcCCceEEEEecCCCCccc-c----ccc--CCCeEEEEc----------c--------
Q 017760           11 GKTFLVTGGLGHVGSALCLELVRRGAYQVRAFDLRTNSPWS-H----LLI--NHGVHCIQG----------L--------   65 (366)
Q Consensus        11 ~~~VlITGgtGfiG~~L~~~L~~~g~~~V~~~dr~~~~~~~-~----~~~--~~~v~~i~g----------D--------   65 (366)
                      .++|+|||||||+|+++++.|+++| ++|++++|+...-.. .    .+.  ..++-+..+          |        
T Consensus        12 ~~~vlVtGatG~iG~~l~~~L~~~g-~~V~~~~r~~~Dl~d~~~~~~~~~~~~~d~vih~A~~~~~~~~~~~~~~~~~~n   90 (292)
T 1vl0_A           12 HMKILITGANGQLGREIQKQLKGKN-VEVIPTDVQDLDITNVLAVNKFFNEKKPNVVINCAAHTAVDKCEEQYDLAYKIN   90 (292)
T ss_dssp             CEEEEEESTTSHHHHHHHHHHTTSS-EEEEEECTTTCCTTCHHHHHHHHHHHCCSEEEECCCCCCHHHHHHCHHHHHHHH
T ss_pred             cceEEEECCCChHHHHHHHHHHhCC-CeEEeccCccCCCCCHHHHHHHHHhcCCCEEEECCccCCHHHHhcCHHHHHHHH
Confidence            4789999999999999999999999 699999886421110 0    011  112111111          0        


Q ss_pred             ------------------------------c--------------------c-----CCCCCceEEEEeCCccccCCCCC
Q 017760           66 ------------------------------R--------------------K-----NNRKCLYTCAVRPAAIYGPGEER   90 (366)
Q Consensus        66 ------------------------------k--------------------s-----~~~~~l~~~ilRp~~iyGp~~~~   90 (366)
                                                    .                    .     ......+++++||+.+||| +..
T Consensus        91 v~~~~~l~~a~~~~~~~iv~~SS~~v~~~~~~~~~~E~~~~~~~~~Y~~sK~~~E~~~~~~~~~~~~lR~~~v~G~-~~~  169 (292)
T 1vl0_A           91 AIGPKNLAAAAYSVGAEIVQISTDYVFDGEAKEPITEFDEVNPQSAYGKTKLEGENFVKALNPKYYIVRTAWLYGD-GNN  169 (292)
T ss_dssp             THHHHHHHHHHHHHTCEEEEEEEGGGSCSCCSSCBCTTSCCCCCSHHHHHHHHHHHHHHHHCSSEEEEEECSEESS-SSC
T ss_pred             HHHHHHHHHHHHHcCCeEEEechHHeECCCCCCCCCCCCCCCCccHHHHHHHHHHHHHHhhCCCeEEEeeeeeeCC-CcC
Confidence                                          0                    0     0001235899999999999 556


Q ss_pred             CHHHHHHHHHcCCCCeeecCCCcceeceeHHHHHHHHHHHHhccccCCCCCCCCCCCCCccEEecCCCCCCHHHHHHHHH
Q 017760           91 HLPRIVSLAKLGLVPFKIGEPSVKTDWIYVDNLVLALILASMGLLDDIPGQKGRPIASGQPYFVSDGFPINTFEFIGPLL  170 (366)
Q Consensus        91 ~l~~~i~~~~~g~~~~~~g~~~~~~~~v~vdDla~a~~~a~~~l~~~~~~~~~~~~~~g~~y~I~~~~~vs~~e~~~~l~  170 (366)
                      +++.++..+..+..+...|+  ..++++|++|+|++++.+++.           +  .+++||+++++++|+.|+++.+.
T Consensus       170 ~~~~~~~~~~~~~~~~~~~~--~~~~~i~v~Dva~~~~~~~~~-----------~--~~~~~~i~~~~~~s~~e~~~~i~  234 (292)
T 1vl0_A          170 FVKTMINLGKTHDELKVVHD--QVGTPTSTVDLARVVLKVIDE-----------K--NYGTFHCTCKGICSWYDFAVEIF  234 (292)
T ss_dssp             HHHHHHHHHHHCSEEEEESS--CEECCEEHHHHHHHHHHHHHH-----------T--CCEEEECCCBSCEEHHHHHHHHH
T ss_pred             hHHHHHHHHhcCCcEEeecC--eeeCCccHHHHHHHHHHHHhc-----------C--CCcEEEecCCCCccHHHHHHHHH
Confidence            77788887777876555654  779999999999999999973           2  67899999999999999999999


Q ss_pred             HhcCCCCCccccCHHHHHHHHHHHHHHHHhhhhccccccCCCCCCcHHhhhhhcccceecHHHHHHhcCCCCCCChHHHH
Q 017760          171 KTLDYDLPKSWLAVPHALFLGKVFSFFYSVLYPWLNRWWLPQPLILPAEVYKVGVTHYFSLLKAKDELCYVPIVSPREGM  250 (366)
Q Consensus       171 ~~lg~~~~~~~lp~~~~~~~a~~~e~~~~~~~~~~~~~~~~~p~l~~~ev~~~~~~~~~d~~ka~~~LG~~p~~~~~e~l  250 (366)
                      +.+|.+.+...+|.+..                       +.+..       ......+|++|++++|||+|+ +++++|
T Consensus       235 ~~~g~~~~~~~~~~~~~-----------------------~~~~~-------~~~~~~~d~~k~~~~lG~~p~-~~~~~l  283 (292)
T 1vl0_A          235 RLTGIDVKVTPCTTEEF-----------------------PRPAK-------RPKYSVLRNYMLELTTGDITR-EWKESL  283 (292)
T ss_dssp             HHHCCCCEEEEECSTTS-----------------------CCSSC-------CCSBCCBCCHHHHHTTCCCCC-BHHHHH
T ss_pred             HHhCCCCceeecccccc-----------------------CcccC-------CCccccccHHHHHHHcCCCCC-CHHHHH
Confidence            99998755444432110                       00000       012346899999999999998 999999


Q ss_pred             HHHHHHHHh
Q 017760          251 AATISYWQD  259 (366)
Q Consensus       251 ~~~v~~~~~  259 (366)
                      +++++||++
T Consensus       284 ~~~~~~~~~  292 (292)
T 1vl0_A          284 KEYIDLLQM  292 (292)
T ss_dssp             HHHHHHHTC
T ss_pred             HHHHHHhcC
Confidence            999999963

>2ydy_A Methionine adenosyltransferase 2 subunit beta; oxidoreductase; 2.25A {Homo sapiens} PDB: 2ydx_A

Probab=99.88  E-value=9.5e-23  Score=191.20  Aligned_cols=148  Identities=9%  Similarity=-0.015  Sum_probs=109.8

Q ss_pred             CceEEEEeCCccccCCCC---CCHHHHHHHHH-cCCCCeeecCCCcceeceeHHHHHHHHHHHHhccccCCCCCCCCCCC
Q 017760           72 CLYTCAVRPAAIYGPGEE---RHLPRIVSLAK-LGLVPFKIGEPSVKTDWIYVDNLVLALILASMGLLDDIPGQKGRPIA  147 (366)
Q Consensus        72 ~l~~~ilRp~~iyGp~~~---~~l~~~i~~~~-~g~~~~~~g~~~~~~~~v~vdDla~a~~~a~~~l~~~~~~~~~~~~~  147 (366)
                      +++++++||+.||||++.   .+++.++..+. .|..+...  ++..++++|++|+|++++.+++.-.        ....
T Consensus       148 ~~~~~~lR~~~v~G~~~~~~~~~~~~~~~~~~~~~~~~~~~--~~~~~~~i~v~Dva~a~~~~~~~~~--------~~~~  217 (315)
T 2ydy_A          148 NLGAAVLRIPILYGEVEKLEESAVTVMFDKVQFSNKSANMD--HWQQRFPTHVKDVATVCRQLAEKRM--------LDPS  217 (315)
T ss_dssp             CTTCEEEEECSEECSCSSGGGSTTGGGHHHHHCCSSCEEEE--CSSBBCCEEHHHHHHHHHHHHHHHH--------TCTT
T ss_pred             CCCeEEEeeeeeeCCCCcccccHHHHHHHHHHhcCCCeeec--cCceECcEEHHHHHHHHHHHHHhhc--------cccC
Confidence            456899999999999876   56677777777 77654444  3577899999999999999886310        0124


Q ss_pred             CCccEEecCCCCCCHHHHHHHHHHhcCCCCC-ccccCHHHHHHHHHHHHHHHHhhhhccccccCCCCCCcHHhhhhhccc
Q 017760          148 SGQPYFVSDGFPINTFEFIGPLLKTLDYDLP-KSWLAVPHALFLGKVFSFFYSVLYPWLNRWWLPQPLILPAEVYKVGVT  226 (366)
Q Consensus       148 ~g~~y~I~~~~~vs~~e~~~~l~~~lg~~~~-~~~lp~~~~~~~a~~~e~~~~~~~~~~~~~~~~~p~l~~~ev~~~~~~  226 (366)
                      .+++||+++++++|+.|+++.+.+.+|.+.+ ...+|.                           .+....    ....+
T Consensus       218 ~~~~~~i~~~~~~s~~e~~~~i~~~~g~~~~~~~~~~~---------------------------~~~~~~----~~~~~  266 (315)
T 2ydy_A          218 IKGTFHWSGNEQMTKYEMACAIADAFNLPSSHLRPITD---------------------------SPVLGA----QRPRN  266 (315)
T ss_dssp             CCEEEECCCSCCBCHHHHHHHHHHHTTCCCTTEEEECS---------------------------CCCSSS----CCCSB
T ss_pred             CCCeEEEcCCCcccHHHHHHHHHHHhCCChhheecccc---------------------------cccccc----CCCcc
Confidence            6789999999999999999999999998755 222221                           000000    00123


Q ss_pred             ceecHHHHHHhcCCCCCCChHHHHHHHHHHHHhcc
Q 017760          227 HYFSLLKAKDELCYVPIVSPREGMAATISYWQDRK  261 (366)
Q Consensus       227 ~~~d~~ka~~~LG~~p~~~~~e~l~~~v~~~~~~~  261 (366)
                      ..+|++|++++ ||+|.++++++|+++++||++++
T Consensus       267 ~~~d~~k~~~~-G~~p~~~~~~~l~~~~~~~~~~~  300 (315)
T 2ydy_A          267 AQLDCSKLETL-GIGQRTPFRIGIKESLWPFLIDK  300 (315)
T ss_dssp             CCBCCHHHHHT-TCCCCCCHHHHHHHHHGGGCC--
T ss_pred             cccchHHHHhc-CCCCCCCHHHHHHHHHHHHccch
Confidence            46899999998 99999999999999999998764

>2hrz_A AGR_C_4963P, nucleoside-diphosphate-sugar epimerase; agrobacterium tumefa structural genomics, PSI-2, protein structure initiative; 1.85A {Agrobacterium tumefaciens}

Probab=99.86  E-value=2.7e-21  Score=183.33  Aligned_cols=144  Identities=16%  Similarity=0.057  Sum_probs=105.9

Q ss_pred             CCceEEEEeCCcccc-CCCC-----CCHHHHHHHHHcCCCCeeecCCCcceeceeHHHHHHHHHHHHhccccCCCCCCCC
Q 017760           71 KCLYTCAVRPAAIYG-PGEE-----RHLPRIVSLAKLGLVPFKIGEPSVKTDWIYVDNLVLALILASMGLLDDIPGQKGR  144 (366)
Q Consensus        71 ~~l~~~ilRp~~iyG-p~~~-----~~l~~~i~~~~~g~~~~~~g~~~~~~~~v~vdDla~a~~~a~~~l~~~~~~~~~~  144 (366)
                      .+++.+++|++.+|| |+..     .+++.++..+.+|....++++++...+++|++|+|++++.+++.           
T Consensus       183 ~~~~~~~ir~~~v~g~pg~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~Dva~~~~~~~~~-----------  251 (342)
T 2hrz_A          183 GFFDGIGIRLPTICIRPGKPNAAASGFFSNILREPLVGQEAVLPVPESIRHWHASPRSAVGFLIHGAMI-----------  251 (342)
T ss_dssp             TSCEEEEEEECEETTCCSSCCCSGGGHHHHHHHHHHTTCCEEECSCTTCEEEEECHHHHHHHHHHHHHS-----------
T ss_pred             cCCCceeEEeeeEEecCCCCcchhHHHHHHHHHHHhcCCCeeccCCCccceeeEehHHHHHHHHHHHhc-----------
Confidence            357789999999999 7652     24567777777887655566667778899999999999999972           


Q ss_pred             CC---CCCccEEecCCCCCCHHHHHHHHHHhcCCCCC--ccccCHHHHHHHHHHHHHHHHhhhhccccccCCCCCCcHHh
Q 017760          145 PI---ASGQPYFVSDGFPINTFEFIGPLLKTLDYDLP--KSWLAVPHALFLGKVFSFFYSVLYPWLNRWWLPQPLILPAE  219 (366)
Q Consensus       145 ~~---~~g~~y~I~~~~~vs~~e~~~~l~~~lg~~~~--~~~lp~~~~~~~a~~~e~~~~~~~~~~~~~~~~~p~l~~~e  219 (366)
                      +.   ..+++||++ ++++|+.|+++.+.+.+|.+.+  ....|...                              ..+
T Consensus       252 ~~~~~~~~~~~ni~-g~~~s~~e~~~~i~~~~g~~~~~~~~~~~~~~------------------------------~~~  300 (342)
T 2hrz_A          252 DVEKVGPRRNLSMP-GLSATVGEQIEALRKVAGEKAVALIRREPNEM------------------------------IMR  300 (342)
T ss_dssp             CHHHHCSCCEEECC-CEEEEHHHHHHHHHHHHCHHHHTTEEECCCHH------------------------------HHH
T ss_pred             cccccCCccEEEcC-CCCCCHHHHHHHHHHHcCcccccceeeccCcc------------------------------hhh
Confidence            22   246799996 5779999999999999986531  11111110                              001


Q ss_pred             hhhhcccceecHHHHHHhcCCCCCCChHHHHHHHHHHHH
Q 017760          220 VYKVGVTHYFSLLKAKDELCYVPIVSPREGMAATISYWQ  258 (366)
Q Consensus       220 v~~~~~~~~~d~~ka~~~LG~~p~~~~~e~l~~~v~~~~  258 (366)
                      .. ......+|++|+++ |||+|+++++++|+++++||+
T Consensus       301 ~~-~~~~~~~d~~k~~~-lG~~p~~~l~e~l~~~~~~~~  337 (342)
T 2hrz_A          301 MC-EGWAPGFEAKRARE-LGFTAESSFEEIIQVHIEDEL  337 (342)
T ss_dssp             HH-TTSCCCBCCHHHHH-TTCCCCSSHHHHHHHHHHHHS
T ss_pred             hh-cccccccChHHHHH-cCCCCCCCHHHHHHHHHHHhc
Confidence            10 01112589999999 999999999999999999997

>3oh8_A Nucleoside-diphosphate sugar epimerase (SULA FAMI; DUF1731_C, northeast structural genomics consortium, NESG, C PSI-biology; 2.00A {Corynebacterium glutamicum}

Probab=99.86  E-value=2.1e-21  Score=194.87  Aligned_cols=206  Identities=17%  Similarity=0.116  Sum_probs=136.8

Q ss_pred             CCeEEEEcCCChhHHHHHHHHHHcCCceEEEEecCCCCccc----------ccccCCCeEEEEc----------c-----
Q 017760           11 GKTFLVTGGLGHVGSALCLELVRRGAYQVRAFDLRTNSPWS----------HLLINHGVHCIQG----------L-----   65 (366)
Q Consensus        11 ~~~VlITGgtGfiG~~L~~~L~~~g~~~V~~~dr~~~~~~~----------~~~~~~~v~~i~g----------D-----   65 (366)
                      +|+|+|||||||+|++|++.|+++| ++|++++|++.....          ..+...++-+..+          +     
T Consensus       147 ~m~VLVTGatG~IG~~l~~~L~~~G-~~V~~l~R~~~~~~~v~~d~~~~~~~~l~~~D~Vih~A~~~~~~~~~~~~~~~~  225 (516)
T 3oh8_A          147 PLTVAITGSRGLVGRALTAQLQTGG-HEVIQLVRKEPKPGKRFWDPLNPASDLLDGADVLVHLAGEPIFGRFNDSHKEAI  225 (516)
T ss_dssp             CCEEEEESTTSHHHHHHHHHHHHTT-CEEEEEESSSCCTTCEECCTTSCCTTTTTTCSEEEECCCC-----CCGGGHHHH
T ss_pred             CCEEEEECCCCHHHHHHHHHHHHCC-CEEEEEECCCCCccceeecccchhHHhcCCCCEEEECCCCccccccchhHHHHH
Confidence            6899999999999999999999999 599999998643210          0111111111100          0     


Q ss_pred             ---------------------------------c----------c---------------------CCCCCceEEEEeCC
Q 017760           66 ---------------------------------R----------K---------------------NNRKCLYTCAVRPA   81 (366)
Q Consensus        66 ---------------------------------k----------s---------------------~~~~~l~~~ilRp~   81 (366)
                                                       .          .                     ....+++++++||+
T Consensus       226 ~~~Nv~gt~~ll~a~a~~~~~~r~V~~SS~~vyg~~~~~~~~~E~~~~~~~~y~~~~~~~E~~~~~~~~~gi~~~ilRp~  305 (516)
T 3oh8_A          226 RESRVLPTKFLAELVAESTQCTTMISASAVGFYGHDRGDEILTEESESGDDFLAEVCRDWEHATAPASDAGKRVAFIRTG  305 (516)
T ss_dssp             HHHTHHHHHHHHHHHHHCSSCCEEEEEEEGGGGCSEEEEEEECTTSCCCSSHHHHHHHHHHHTTHHHHHTTCEEEEEEEC
T ss_pred             HHHHHHHHHHHHHHHHhcCCCCEEEEeCcceEecCCCCCCccCCCCCCCcChHHHHHHHHHHHHHHHHhCCCCEEEEEee
Confidence                                             0          0                     11357899999999


Q ss_pred             ccccCCCCCCHHHHHHHHHcCCCCeeecCCCcceeceeHHHHHHHHHHHHhccccCCCCCCCCCCCCCccEEecCCCCCC
Q 017760           82 AIYGPGEERHLPRIVSLAKLGLVPFKIGEPSVKTDWIYVDNLVLALILASMGLLDDIPGQKGRPIASGQPYFVSDGFPIN  161 (366)
Q Consensus        82 ~iyGp~~~~~l~~~i~~~~~g~~~~~~g~~~~~~~~v~vdDla~a~~~a~~~l~~~~~~~~~~~~~~g~~y~I~~~~~vs  161 (366)
                      ++|||+. +.++.+...+..|.. ..+|++++.++|+|++|+|++++.+++           .+. .++.||+++++++|
T Consensus       306 ~v~Gp~~-~~~~~~~~~~~~g~~-~~~g~g~~~~~~i~v~Dva~ai~~~l~-----------~~~-~~g~~ni~~~~~~s  371 (516)
T 3oh8_A          306 VALSGRG-GMLPLLKTLFSTGLG-GKFGDGTSWFSWIAIDDLTDIYYRAIV-----------DAQ-ISGPINAVAPNPVS  371 (516)
T ss_dssp             EEEBTTB-SHHHHHHHTTC---C-CCCTTSCCEECEEEHHHHHHHHHHHHH-----------CTT-CCEEEEESCSCCEE
T ss_pred             EEECCCC-ChHHHHHHHHHhCCC-cccCCCCceEceEeHHHHHHHHHHHHh-----------Ccc-cCCcEEEECCCCCC
Confidence            9999985 467777776666665 467899999999999999999999997           333 35689999999999


Q ss_pred             HHHHHHHHHHhcCCCCCccccCHHHHHHHHHHHHHHHHhhhhccccccCCCCCCcHH-hhhhhcccceecHHHHHHhcCC
Q 017760          162 TFEFIGPLLKTLDYDLPKSWLAVPHALFLGKVFSFFYSVLYPWLNRWWLPQPLILPA-EVYKVGVTHYFSLLKAKDELCY  240 (366)
Q Consensus       162 ~~e~~~~l~~~lg~~~~~~~lp~~~~~~~a~~~e~~~~~~~~~~~~~~~~~p~l~~~-ev~~~~~~~~~d~~ka~~~LG~  240 (366)
                      +.|+++.+++.+|.+. .+.+|.+.....                        +... .......+...+++|++ ++||
T Consensus       372 ~~el~~~i~~~~g~~~-~~~~p~~~~~~~------------------------~g~~~~~~~~~~~~~~~~~kl~-~lG~  425 (516)
T 3oh8_A          372 NADMTKILATSMHRPA-FIQIPSLGPKIL------------------------LGSQGAEELALASQRTAPAALE-NLSH  425 (516)
T ss_dssp             HHHHHHHTTC----------------------------------------------CCGGGGGGCEEEECCHHHH-HTTC
T ss_pred             HHHHHHHHHHHhCCCC-CCCCCHHHHHHH------------------------hCCchhHHHhhcCCeechHHHH-HCCC
Confidence            9999999999999764 344554433210                        0000 01122334467889998 5999


Q ss_pred             CCCCC-hHHHHHHHHHHH
Q 017760          241 VPIVS-PREGMAATISYW  257 (366)
Q Consensus       241 ~p~~~-~~e~l~~~v~~~  257 (366)
                      +|+++ ++++|+++++..
T Consensus       426 ~~~~~~l~e~l~~~l~~~  443 (516)
T 3oh8_A          426 TFRYTDIGAAIAHELGYE  443 (516)
T ss_dssp             CCSCSSHHHHHHHHHTCC
T ss_pred             CCCCCCHHHHHHHHhCcc
Confidence            99987 999999998754

>2zcu_A Uncharacterized oxidoreductase YTFG; alpha-beta sandwich; 1.80A {Escherichia coli} PDB: 2zcv_A*

Probab=99.84  E-value=7.5e-21  Score=175.54  Aligned_cols=210  Identities=11%  Similarity=-0.002  Sum_probs=143.6

Q ss_pred             eEEEEcCCChhHHHHHHHHHHc--CCceEEEEecCCCCcccccccCCCeEEEEcc-------------------------
Q 017760           13 TFLVTGGLGHVGSALCLELVRR--GAYQVRAFDLRTNSPWSHLLINHGVHCIQGL-------------------------   65 (366)
Q Consensus        13 ~VlITGgtGfiG~~L~~~L~~~--g~~~V~~~dr~~~~~~~~~~~~~~v~~i~gD-------------------------   65 (366)
                      +|+||||+||+|+++++.|+++  | ++|++++|++...  ..+...+++++.+|                         
T Consensus         1 ~ilVtGatG~iG~~l~~~L~~~~~g-~~V~~~~r~~~~~--~~~~~~~~~~~~~D~~d~~~~~~~~~~~d~vi~~a~~~~   77 (286)
T 2zcu_A            1 MIAITGATGQLGHYVIESLMKTVPA-SQIVAIVRNPAKA--QALAAQGITVRQADYGDEAALTSALQGVEKLLLISSSEV   77 (286)
T ss_dssp             CEEEESTTSHHHHHHHHHHTTTSCG-GGEEEEESCTTTC--HHHHHTTCEEEECCTTCHHHHHHHTTTCSEEEECC----
T ss_pred             CEEEEcCCchHHHHHHHHHHhhCCC-ceEEEEEcChHhh--hhhhcCCCeEEEcCCCCHHHHHHHHhCCCEEEEeCCCCc
Confidence            5899999999999999999998  8 5899999976532  11222456666666                         


Q ss_pred             ----------------------------------------c-----cCCCCCceEEEEeCCccccCCCCCCHHHHHHHHH
Q 017760           66 ----------------------------------------R-----KNNRKCLYTCAVRPAAIYGPGEERHLPRIVSLAK  100 (366)
Q Consensus        66 ----------------------------------------k-----s~~~~~l~~~ilRp~~iyGp~~~~~l~~~i~~~~  100 (366)
                                                              |     .....+++++++||+.++|+.. ..+   .....
T Consensus        78 ~~~~~~~~~l~~a~~~~~~~~~v~~Ss~~~~~~~~~y~~sK~~~e~~~~~~~~~~~ilrp~~~~~~~~-~~~---~~~~~  153 (286)
T 2zcu_A           78 GQRAPQHRNVINAAKAAGVKFIAYTSLLHADTSPLGLADEHIETEKMLADSGIVYTLLRNGWYSENYL-ASA---PAALE  153 (286)
T ss_dssp             ----CHHHHHHHHHHHHTCCEEEEEEETTTTTCCSTTHHHHHHHHHHHHHHCSEEEEEEECCBHHHHH-TTH---HHHHH
T ss_pred             hHHHHHHHHHHHHHHHcCCCEEEEECCCCCCCCcchhHHHHHHHHHHHHHcCCCeEEEeChHHhhhhH-HHh---HHhhc
Confidence                                                    0     0112478999999987666532 222   22333


Q ss_pred             cCCCCeeecCCCcceeceeHHHHHHHHHHHHhccccCCCCCCCCCCCCCccEEecCCCCCCHHHHHHHHHHhcCCCCCcc
Q 017760          101 LGLVPFKIGEPSVKTDWIYVDNLVLALILASMGLLDDIPGQKGRPIASGQPYFVSDGFPINTFEFIGPLLKTLDYDLPKS  180 (366)
Q Consensus       101 ~g~~~~~~g~~~~~~~~v~vdDla~a~~~a~~~l~~~~~~~~~~~~~~g~~y~I~~~~~vs~~e~~~~l~~~lg~~~~~~  180 (366)
                      .+..  ..++++..++++|++|+|++++.+++           .+...|++||+++++++|+.|+++.+.+.+|.+.+..
T Consensus       154 ~~~~--~~~~~~~~~~~i~~~Dva~~~~~~~~-----------~~~~~g~~~~i~~~~~~s~~e~~~~i~~~~g~~~~~~  220 (286)
T 2zcu_A          154 HGVF--IGAAGDGKIASATRADYAAAAARVIS-----------EAGHEGKVYELAGDSAWTLTQLAAELTKQSGKQVTYQ  220 (286)
T ss_dssp             HTEE--EESCTTCCBCCBCHHHHHHHHHHHHH-----------SSSCTTCEEEECCSSCBCHHHHHHHHHHHHSSCCEEE
T ss_pred             CCce--eccCCCCccccccHHHHHHHHHHHhc-----------CCCCCCceEEEeCCCcCCHHHHHHHHHHHHCCCCcee
Confidence            4432  35667788999999999999999997           3345688999999999999999999999999887777


Q ss_pred             ccCHHHHHHHHH---HHHHHHHhhhhccccccCCCCCCcHHhhhhhcc-cceecHHHHHHhcCCCCCCChHHHHHHHHHH
Q 017760          181 WLAVPHALFLGK---VFSFFYSVLYPWLNRWWLPQPLILPAEVYKVGV-THYFSLLKAKDELCYVPIVSPREGMAATISY  256 (366)
Q Consensus       181 ~lp~~~~~~~a~---~~e~~~~~~~~~~~~~~~~~p~l~~~ev~~~~~-~~~~d~~ka~~~LG~~p~~~~~e~l~~~v~~  256 (366)
                      .+|.+.....+.   ..+.....+               ......... ...+|++|++++||+ |..+++++++++++|
T Consensus       221 ~~~~~~~~~~~~~~~~~~~~~~~~---------------~~~~~~~~~~~~~~~~~~~~~~lg~-~~~~~~e~l~~~~~~  284 (286)
T 2zcu_A          221 NLSEADFAAALKSVGLPDGLADML---------------ADSDVGASKGGLFDDSKTLSKLIGH-PTTTLAESVSHLFNV  284 (286)
T ss_dssp             ECCHHHHHHHHTTSSCCHHHHHHH---------------HHHHHHHHTTTTCCCCCHHHHHHTS-CCCCHHHHHHGGGC-
T ss_pred             eCCHHHHHHHHHHcCCCHHHHHHH---------------HHHHHHHhCCCCccCchHHHHHhCc-CCCCHHHHHHHHHhh
Confidence            788765433220   000000000               000111111 235688999999997 446999999999988


Q ss_pred             HH
Q 017760          257 WQ  258 (366)
Q Consensus       257 ~~  258 (366)
                      |+
T Consensus       285 ~~  286 (286)
T 2zcu_A          285 NN  286 (286)
T ss_dssp             --
T ss_pred             cC
Confidence            74

>2rh8_A Anthocyanidin reductase; flavonoids, rossmann fold, short chain dehydrogenase/reductase, oxidoreductase; 2.22A {Vitis vinifera} PDB: 3hfs_A

Probab=99.84  E-value=1.1e-20  Score=178.78  Aligned_cols=138  Identities=15%  Similarity=0.109  Sum_probs=93.5

Q ss_pred             CceEEEEeCCccccCCCCCCHHHHHHH---HHcCCCCeeecCC------CcceeceeHHHHHHHHHHHHhccccCCCCCC
Q 017760           72 CLYTCAVRPAAIYGPGEERHLPRIVSL---AKLGLVPFKIGEP------SVKTDWIYVDNLVLALILASMGLLDDIPGQK  142 (366)
Q Consensus        72 ~l~~~ilRp~~iyGp~~~~~l~~~i~~---~~~g~~~~~~g~~------~~~~~~v~vdDla~a~~~a~~~l~~~~~~~~  142 (366)
                      +++++++||++||||+....++..+..   ...|... .+++.      ....+|+|++|+|++++.+++          
T Consensus       187 gi~~~~lrp~~v~Gp~~~~~~~~~~~~~~~~~~g~~~-~~~~~~~~~~~~~~~~~i~v~Dva~a~~~~~~----------  255 (338)
T 2rh8_A          187 NIDLITVIPTLMAGSSLTSDVPSSIGLAMSLITGNEF-LINGMKGMQMLSGSVSIAHVEDVCRAHIFVAE----------  255 (338)
T ss_dssp             TCCEEEEEECEEESCCSSSSCCHHHHHHHHHHHTCHH-HHHHHHHHHHHHSSEEEEEHHHHHHHHHHHHH----------
T ss_pred             CCcEEEEeCCceECCCCCCCCCchHHHHHHHHcCCcc-ccccccccccccCcccEEEHHHHHHHHHHHHc----------
Confidence            678999999999999875433332222   2344321 12211      122489999999999999986          


Q ss_pred             CCCCCCCccEEecCCCCCCHHHHHHHHHHhcCC-CCCccccCHHHHHHHHHHHHHHHHhhhhccccccCCCCCCcHHhhh
Q 017760          143 GRPIASGQPYFVSDGFPINTFEFIGPLLKTLDY-DLPKSWLAVPHALFLGKVFSFFYSVLYPWLNRWWLPQPLILPAEVY  221 (366)
Q Consensus       143 ~~~~~~g~~y~I~~~~~vs~~e~~~~l~~~lg~-~~~~~~lp~~~~~~~a~~~e~~~~~~~~~~~~~~~~~p~l~~~ev~  221 (366)
                       .+. .++.|+++++ .+|+.|+++.+.+.++. +.|.. .                           ...+.       
T Consensus       256 -~~~-~~~~~~~~~~-~~s~~e~~~~l~~~~~~~~~~~~-~---------------------------~~~~~-------  297 (338)
T 2rh8_A          256 -KES-ASGRYICCAA-NTSVPELAKFLSKRYPQYKVPTD-F---------------------------GDFPP-------  297 (338)
T ss_dssp             -CTT-CCEEEEECSE-EECHHHHHHHHHHHCTTSCCCCC-C---------------------------TTSCS-------
T ss_pred             -CCC-cCCcEEEecC-CCCHHHHHHHHHHhCCCCCCCCC-C---------------------------CCCCc-------
Confidence             222 2457888765 58999999999988752 21110 0                           00000       


Q ss_pred             hhcccceecHHHHHHhcCCCCCCChHHHHHHHHHHHHhcc
Q 017760          222 KVGVTHYFSLLKAKDELCYVPIVSPREGMAATISYWQDRK  261 (366)
Q Consensus       222 ~~~~~~~~d~~ka~~~LG~~p~~~~~e~l~~~v~~~~~~~  261 (366)
                        .....+|++|+ ++|||+|+++++++|+++++||++++
T Consensus       298 --~~~~~~d~~k~-~~lG~~p~~~l~~gl~~~~~~~~~~~  334 (338)
T 2rh8_A          298 --KSKLIISSEKL-VKEGFSFKYGIEEIYDESVEYFKAKG  334 (338)
T ss_dssp             --SCSCCCCCHHH-HHHTCCCSCCHHHHHHHHHHHHHHTT
T ss_pred             --CcceeechHHH-HHhCCCCCCCHHHHHHHHHHHHHHcC
Confidence              01146899999 66999999999999999999998764

>2jl1_A Triphenylmethane reductase; oxidoreductase, bioremediation; HET: NAP GOL; 1.96A {Citrobacter SP} PDB: 2vrb_A* 2vrc_A 2vrc_D

Probab=99.84  E-value=1.6e-20  Score=173.58  Aligned_cols=208  Identities=13%  Similarity=0.050  Sum_probs=145.2

Q ss_pred             CeEEEEcCCChhHHHHHHHHHHc--CCceEEEEecCCCCcccccccCCCeEEEEcc------------------------
Q 017760           12 KTFLVTGGLGHVGSALCLELVRR--GAYQVRAFDLRTNSPWSHLLINHGVHCIQGL------------------------   65 (366)
Q Consensus        12 ~~VlITGgtGfiG~~L~~~L~~~--g~~~V~~~dr~~~~~~~~~~~~~~v~~i~gD------------------------   65 (366)
                      |+|+|||||||+|+++++.|+++  | ++|++++|++...  ..+...+++++.+|                        
T Consensus         1 ~~ilVtGatG~iG~~l~~~L~~~~~g-~~V~~~~r~~~~~--~~l~~~~~~~~~~D~~d~~~l~~~~~~~d~vi~~a~~~   77 (287)
T 2jl1_A            1 FSIAVTGATGQLGGLVIQHLLKKVPA-SQIIAIVRNVEKA--STLADQGVEVRHGDYNQPESLQKAFAGVSKLLFISGPH   77 (287)
T ss_dssp             CCEEETTTTSHHHHHHHHHHTTTSCG-GGEEEEESCTTTT--HHHHHTTCEEEECCTTCHHHHHHHTTTCSEEEECCCCC
T ss_pred             CeEEEEcCCchHHHHHHHHHHHhCCC-CeEEEEEcCHHHH--hHHhhcCCeEEEeccCCHHHHHHHHhcCCEEEEcCCCC
Confidence            47999999999999999999998  8 5899999976432  11222355666666                        


Q ss_pred             -------------------------------------------c-----cCCCCCceEEEEeCCccccCCCCCCHHHHHH
Q 017760           66 -------------------------------------------R-----KNNRKCLYTCAVRPAAIYGPGEERHLPRIVS   97 (366)
Q Consensus        66 -------------------------------------------k-----s~~~~~l~~~ilRp~~iyGp~~~~~l~~~i~   97 (366)
                                                                 |     ..+..+++++++||+.++|+.....+.   .
T Consensus        78 ~~~~~n~~~~~~l~~a~~~~~~~~~v~~Ss~~~~~~~~~y~~~K~~~E~~~~~~~~~~~ilrp~~~~~~~~~~~~~---~  154 (287)
T 2jl1_A           78 YDNTLLIVQHANVVKAARDAGVKHIAYTGYAFAEESIIPLAHVHLATEYAIRTTNIPYTFLRNALYTDFFVNEGLR---A  154 (287)
T ss_dssp             SCHHHHHHHHHHHHHHHHHTTCSEEEEEEETTGGGCCSTHHHHHHHHHHHHHHTTCCEEEEEECCBHHHHSSGGGH---H
T ss_pred             cCchHHHHHHHHHHHHHHHcCCCEEEEECCCCCCCCCCchHHHHHHHHHHHHHcCCCeEEEECCEeccccchhhHH---H
Confidence                                                       0     012357899999999998875232332   2


Q ss_pred             HHHcCCCCeeecCCCcceeceeHHHHHHHHHHHHhccccCCCCCCCCCCCCCccEEecCCCCCCHHHHHHHHHHhcCCCC
Q 017760           98 LAKLGLVPFKIGEPSVKTDWIYVDNLVLALILASMGLLDDIPGQKGRPIASGQPYFVSDGFPINTFEFIGPLLKTLDYDL  177 (366)
Q Consensus        98 ~~~~g~~~~~~g~~~~~~~~v~vdDla~a~~~a~~~l~~~~~~~~~~~~~~g~~y~I~~~~~vs~~e~~~~l~~~lg~~~  177 (366)
                      .+..+..  ..+.++..++|+|++|+|++++.+++           .+...|++||+++++++|+.|+++.+.+.+|.+.
T Consensus       155 ~~~~~~~--~~~~~~~~~~~i~~~Dva~~~~~~~~-----------~~~~~g~~~~i~~~~~~s~~e~~~~i~~~~g~~~  221 (287)
T 2jl1_A          155 STESGAI--VTNAGSGIVNSVTRNELALAAATVLT-----------EEGHENKTYNLVSNQPWTFDELAQILSEVSGKKV  221 (287)
T ss_dssp             HHHHTEE--EESCTTCCBCCBCHHHHHHHHHHHHT-----------SSSCTTEEEEECCSSCBCHHHHHHHHHHHHSSCC
T ss_pred             HhhCCce--eccCCCCccCccCHHHHHHHHHHHhc-----------CCCCCCcEEEecCCCcCCHHHHHHHHHHHHCCcc
Confidence            3334543  24556778999999999999999996           3345688999999999999999999999999987


Q ss_pred             CccccCHHHHHHHHHH---HHHHHHhhhhccccccCCCCCCcHHhhhhh-cccceecHHHHHHhcCCCCCCChHHHHHHH
Q 017760          178 PKSWLAVPHALFLGKV---FSFFYSVLYPWLNRWWLPQPLILPAEVYKV-GVTHYFSLLKAKDELCYVPIVSPREGMAAT  253 (366)
Q Consensus       178 ~~~~lp~~~~~~~a~~---~e~~~~~~~~~~~~~~~~~p~l~~~ev~~~-~~~~~~d~~ka~~~LG~~p~~~~~e~l~~~  253 (366)
                      +...+|..........   .+.....+               ....... .....+|++|++++||  |.++++|+++++
T Consensus       222 ~~~~~~~~~~~~~~~~~~~~~~~~~~~---------------~~~~~~~~~~~~~~~~~~~~~~lG--~~~~l~e~l~~~  284 (287)
T 2jl1_A          222 VHQPVSFEEEKNFLVNAGVPEPFTEIT---------------AAIYDAISKGEASKTSDDLQKLIG--SLTPLKETVKQA  284 (287)
T ss_dssp             EEEECCHHHHHHHHHHTTCCHHHHHHH---------------HHHHHHHHTTTTCCCCSHHHHHHS--SCCCHHHHHHHH
T ss_pred             eEEeCCHHHHHHHHHhCCCCHHHHHHH---------------HHHHHHHhCCCCcCCchHHHHHhC--CCCCHHHHHHHH
Confidence            7777887654332210   00000000               0000001 1223578999999999  667999999998


Q ss_pred             HH
Q 017760          254 IS  255 (366)
Q Consensus       254 v~  255 (366)
                      ++
T Consensus       285 ~~  286 (287)
T 2jl1_A          285 LK  286 (287)
T ss_dssp             HT
T ss_pred             hc
Confidence            75

>1y1p_A ARII, aldehyde reductase II; rossmann fold, short chain dehydrogenase reductase, oxidoreductase; HET: NMN AMP; 1.60A {Sporidiobolus salmonicolor} SCOP: c.2.1.2 PDB: 1ujm_A* 1zze_A

Probab=99.83  E-value=3.3e-20  Score=175.38  Aligned_cols=137  Identities=10%  Similarity=-0.091  Sum_probs=102.6

Q ss_pred             CceEEEEeCCccccCCCCC-----CHHHHHHHHHcCCCCeeecCCCcceeceeHHHHHHHHHHHHhccccCCCCCCCCCC
Q 017760           72 CLYTCAVRPAAIYGPGEER-----HLPRIVSLAKLGLVPFKIGEPSVKTDWIYVDNLVLALILASMGLLDDIPGQKGRPI  146 (366)
Q Consensus        72 ~l~~~ilRp~~iyGp~~~~-----~l~~~i~~~~~g~~~~~~g~~~~~~~~v~vdDla~a~~~a~~~l~~~~~~~~~~~~  146 (366)
                      +++++++||+.+|||+...     .++.++..+.+|....+.+++ ..++|+|++|+|++++.+++           .+.
T Consensus       197 ~~~~~~~rp~~v~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~~~~~v~v~Dva~a~~~~~~-----------~~~  264 (342)
T 1y1p_A          197 HFTLNAVLPNYTIGTIFDPETQSGSTSGWMMSLFNGEVSPALALM-PPQYYVSAVDIGLLHLGCLV-----------LPQ  264 (342)
T ss_dssp             SSEEEEEEESEEECCCSCTTTCCCHHHHHHHHHHTTCCCHHHHTC-CSEEEEEHHHHHHHHHHHHH-----------CTT
T ss_pred             CceEEEEcCCceECCCCCCCCCCccHHHHHHHHHcCCCccccccC-CcCCEeEHHHHHHHHHHHHc-----------Ccc
Confidence            4668999999999997642     577888888888876656665 67899999999999999987           333


Q ss_pred             CCCccEEecCCCCCCHHHHHHHHHHhcCCCCCccccCHHHHHHHHHHHHHHHHhhhhccccccCCCCCCcHHhhhhhccc
Q 017760          147 ASGQPYFVSDGFPINTFEFIGPLLKTLDYDLPKSWLAVPHALFLGKVFSFFYSVLYPWLNRWWLPQPLILPAEVYKVGVT  226 (366)
Q Consensus       147 ~~g~~y~I~~~~~vs~~e~~~~l~~~lg~~~~~~~lp~~~~~~~a~~~e~~~~~~~~~~~~~~~~~p~l~~~ev~~~~~~  226 (366)
                      ..|+.+ ++++.++|+.|+++.+.+.+|.+ + +..                            ..+..       ....
T Consensus       265 ~~g~~~-~~~g~~~s~~e~~~~i~~~~~~~-~-~~~----------------------------~~~~~-------~~~~  306 (342)
T 1y1p_A          265 IERRRV-YGTAGTFDWNTVLATFRKLYPSK-T-FPA----------------------------DFPDQ-------GQDL  306 (342)
T ss_dssp             CCSCEE-EECCEEECHHHHHHHHHHHCTTS-C-CCC----------------------------CCCCC-------CCCC
T ss_pred             cCCceE-EEeCCCCCHHHHHHHHHHHCCCc-c-CCC----------------------------CCCcc-------cccc
Confidence            445555 45567799999999999999864 1 111                            00100       0112


Q ss_pred             ceecHHHHHHhcCC---CCCCChHHHHHHHHHHHH
Q 017760          227 HYFSLLKAKDELCY---VPIVSPREGMAATISYWQ  258 (366)
Q Consensus       227 ~~~d~~ka~~~LG~---~p~~~~~e~l~~~v~~~~  258 (366)
                      ..+|++|++++|||   .+..+++++|+++++||+
T Consensus       307 ~~~d~~k~~~~lg~~~~~~~~~l~~~l~~~~~~~~  341 (342)
T 1y1p_A          307 SKFDTAPSLEILKSLGRPGWRSIEESIKDLVGSET  341 (342)
T ss_dssp             CEECCHHHHHHHHHTTCCSCCCHHHHHHHHHCCSC
T ss_pred             ccCChHHHHHHHhhcccCCcCCHHHHHHHHHHHhh
Confidence            46799999999987   566799999999999885

>2p4h_X Vestitone reductase; NADPH-dependent reductase, isoflavonoid, plant protein; 1.40A {Medicago sativa}

Probab=99.82  E-value=6.2e-20  Score=172.26  Aligned_cols=140  Identities=14%  Similarity=0.066  Sum_probs=94.1

Q ss_pred             CCceEEEEeCCccccCCCCCCHHHHHHH---HHcCCCCeeecCCCcceeceeHHHHHHHHHHHHhccccCCCCCCCCCCC
Q 017760           71 KCLYTCAVRPAAIYGPGEERHLPRIVSL---AKLGLVPFKIGEPSVKTDWIYVDNLVLALILASMGLLDDIPGQKGRPIA  147 (366)
Q Consensus        71 ~~l~~~ilRp~~iyGp~~~~~l~~~i~~---~~~g~~~~~~g~~~~~~~~v~vdDla~a~~~a~~~l~~~~~~~~~~~~~  147 (366)
                      .+++++++||+++|||+....++..+..   ...|.... +++  ...+|+|++|+|++++.+++           .+..
T Consensus       178 ~gi~~~~lrp~~v~g~~~~~~~~~~~~~~~~~~~g~~~~-~~~--~~~~~i~v~Dva~a~~~~~~-----------~~~~  243 (322)
T 2p4h_X          178 NGIDVVTLILPFIVGRFVCPKLPDSIEKALVLVLGKKEQ-IGV--TRFHMVHVDDVARAHIYLLE-----------NSVP  243 (322)
T ss_dssp             TTCCEEEEEECEEESCCCSSSCCHHHHHHTHHHHSCGGG-CCE--EEEEEEEHHHHHHHHHHHHH-----------SCCC
T ss_pred             cCCcEEEEcCCceECCCCCCCCCchHHHHHHHHhCCCcc-CcC--CCcCEEEHHHHHHHHHHHhh-----------CcCC
Confidence            3678999999999999865333222221   23444322 332  33489999999999999986           3333


Q ss_pred             CCccEEecCCCCCCHHHHHHHHHHhcCCCCCccccCHHHHHHHHHHHHHHHHhhhhccccccCCCCCCcHHhhhhhcccc
Q 017760          148 SGQPYFVSDGFPINTFEFIGPLLKTLDYDLPKSWLAVPHALFLGKVFSFFYSVLYPWLNRWWLPQPLILPAEVYKVGVTH  227 (366)
Q Consensus       148 ~g~~y~I~~~~~vs~~e~~~~l~~~lg~~~~~~~lp~~~~~~~a~~~e~~~~~~~~~~~~~~~~~p~l~~~ev~~~~~~~  227 (366)
                      .|+ || ++++++|+.|+++.+.+..+..    .+|...             .          ..+ ...      ....
T Consensus       244 ~g~-~~-~~~~~~s~~e~~~~i~~~~~~~----~~~~~~-------------~----------~~~-~~~------~~~~  287 (322)
T 2p4h_X          244 GGR-YN-CSPFIVPIEEMSQLLSAKYPEY----QILTVD-------------E----------LKE-IKG------ARLP  287 (322)
T ss_dssp             CEE-EE-CCCEEEEHHHHHHHHHHHCTTS----CCCCTT-------------T----------TTT-CCC------EECC
T ss_pred             CCC-EE-EcCCCCCHHHHHHHHHHhCCCC----CCCCCc-------------c----------ccC-CCC------Ccce
Confidence            454 88 5667899999999999877421    111100             0          000 000      0234


Q ss_pred             eecHHHHHHhcCCCCCCChHHHHHHHHHHHHhcc
Q 017760          228 YFSLLKAKDELCYVPIVSPREGMAATISYWQDRK  261 (366)
Q Consensus       228 ~~d~~ka~~~LG~~p~~~~~e~l~~~v~~~~~~~  261 (366)
                      .+|++|+ ++|||+|+++++++|+++++|+++++
T Consensus       288 ~~d~~k~-~~lG~~p~~~~~~~l~~~~~~~~~~~  320 (322)
T 2p4h_X          288 DLNTKKL-VDAGFDFKYTIEDMFDDAIQCCKEKG  320 (322)
T ss_dssp             EECCHHH-HHTTCCCCCCHHHHHHHHHHHHHHHT
T ss_pred             ecccHHH-HHhCCccCCCHHHHHHHHHHHHHhcC
Confidence            6899999 66999999999999999999998754

>2c29_D Dihydroflavonol 4-reductase; flavonoids, short dehydrogenase reductase, NADPH, dihydroquercetin, rossmann fold, oxidoreductase; HET: NAP DQH; 1.81A {Vitis vinifera} PDB: 2iod_A* 2nnl_D* 3bxx_A* 3c1t_A*

Probab=99.82  E-value=2.9e-20  Score=175.97  Aligned_cols=139  Identities=14%  Similarity=0.089  Sum_probs=93.2

Q ss_pred             CceEEEEeCCccccCCCCCCHHHHHHHH---HcCCCCeeecCCCcceeceeHHHHHHHHHHHHhccccCCCCCCCCCCCC
Q 017760           72 CLYTCAVRPAAIYGPGEERHLPRIVSLA---KLGLVPFKIGEPSVKTDWIYVDNLVLALILASMGLLDDIPGQKGRPIAS  148 (366)
Q Consensus        72 ~l~~~ilRp~~iyGp~~~~~l~~~i~~~---~~g~~~~~~g~~~~~~~~v~vdDla~a~~~a~~~l~~~~~~~~~~~~~~  148 (366)
                      +++++++||++||||+....++..+...   ..|... .+++. ...+|+|++|+|++++.+++           .+.. 
T Consensus       182 gi~~~~lrp~~v~Gp~~~~~~~~~~~~~~~~~~g~~~-~~~~~-~~~~~i~v~Dva~a~~~~~~-----------~~~~-  247 (337)
T 2c29_D          182 NIDFITIIPTLVVGPFIMSSMPPSLITALSPITGNEA-HYSII-RQGQFVHLDDLCNAHIYLFE-----------NPKA-  247 (337)
T ss_dssp             TCCEEEEEECEEESCCSCSSCCHHHHHHTHHHHTCGG-GHHHH-TEEEEEEHHHHHHHHHHHHH-----------CTTC-
T ss_pred             CCcEEEEeCCceECCCCCCCCCchHHHHHHHHcCCCc-ccccc-CCCCEEEHHHHHHHHHHHhc-----------Cccc-
Confidence            6789999999999998654333332222   334322 22222 23459999999999999986           3222 


Q ss_pred             CccEEecCCCCCCHHHHHHHHHHhcCCCCCccccCHHHHHHHHHHHHHHHHhhhhccccccCCCCCCcHHhhhhhcccce
Q 017760          149 GQPYFVSDGFPINTFEFIGPLLKTLDYDLPKSWLAVPHALFLGKVFSFFYSVLYPWLNRWWLPQPLILPAEVYKVGVTHY  228 (366)
Q Consensus       149 g~~y~I~~~~~vs~~e~~~~l~~~lg~~~~~~~lp~~~~~~~a~~~e~~~~~~~~~~~~~~~~~p~l~~~ev~~~~~~~~  228 (366)
                      ++.|+++++ .+|+.|+++.+.+.++..    .+|..                       +...+        .......
T Consensus       248 ~~~~~~~~~-~~s~~e~~~~i~~~~~~~----~~~~~-----------------------~~~~~--------~~~~~~~  291 (337)
T 2c29_D          248 EGRYICSSH-DCIILDLAKMLREKYPEY----NIPTE-----------------------FKGVD--------ENLKSVC  291 (337)
T ss_dssp             CEEEEECCE-EEEHHHHHHHHHHHCTTS----CCCSC-----------------------CTTCC--------TTCCCCE
T ss_pred             CceEEEeCC-CCCHHHHHHHHHHHCCCc----cCCCC-----------------------CCccc--------CCCcccc
Confidence            446876654 589999999999987421    11100                       00000        0112336


Q ss_pred             ecHHHHHHhcCCCCCCChHHHHHHHHHHHHhcc
Q 017760          229 FSLLKAKDELCYVPIVSPREGMAATISYWQDRK  261 (366)
Q Consensus       229 ~d~~ka~~~LG~~p~~~~~e~l~~~v~~~~~~~  261 (366)
                      +|++|+ ++|||+|+++++++++++++|+++++
T Consensus       292 ~d~~k~-~~lG~~p~~~l~e~l~~~~~~~~~~~  323 (337)
T 2c29_D          292 FSSKKL-TDLGFEFKYSLEDMFTGAVDTCRAKG  323 (337)
T ss_dssp             ECCHHH-HHHTCCCCCCHHHHHHHHHHHHHHTT
T ss_pred             ccHHHH-HHcCCCcCCCHHHHHHHHHHHHHHcC
Confidence            899999 78999999999999999999998764

>4f6c_A AUSA reductase domain protein; thioester reductase, oxidoreductase; 2.81A {Staphylococcus aureus}

Probab=99.80  E-value=1.2e-19  Score=177.52  Aligned_cols=159  Identities=8%  Similarity=-0.049  Sum_probs=110.1

Q ss_pred             CCceEEEEeCCccccCCCCCC---------HHHHHHHHHcCCCCeeecCCCcceeceeHHHHHHHHHHHHhccccCCCCC
Q 017760           71 KCLYTCAVRPAAIYGPGEERH---------LPRIVSLAKLGLVPFKIGEPSVKTDWIYVDNLVLALILASMGLLDDIPGQ  141 (366)
Q Consensus        71 ~~l~~~ilRp~~iyGp~~~~~---------l~~~i~~~~~g~~~~~~g~~~~~~~~v~vdDla~a~~~a~~~l~~~~~~~  141 (366)
                      .+++++++||++|||++....         +..++..+..+..+. .++++..++|+|++|+|++++.+++         
T Consensus       245 ~g~~~~ivRpg~v~G~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~~~~~~~~~~v~v~DvA~ai~~~~~---------  314 (427)
T 4f6c_A          245 NGLDGRIVRVGNLTSPYNGRWHMRNIKTNRFSMVMNDLLQLDCIG-VSMAEMPVDFSFVDTTARQIVALAQ---------  314 (427)
T ss_dssp             TTCCEEEEEECCEESCSSSCCCCTTGGGCHHHHHHHHHHHSSEEE-HHHHTCEECCEEHHHHHHHHHHHTT---------
T ss_pred             cCCCEEEEeCCeeecCCCCCccccCcchHHHHHHHHHHHhcCCCC-CccccceEEEeeHHHHHHHHHHHHc---------
Confidence            478999999999999987543         677777777666433 3456788999999999999999986         


Q ss_pred             CCCCCCCCccEEecCCCCCCHHHHHHHHHHhcCCCCCccccCHHHHHHHHHHHHHHHHhhhhccccccCCCCCCcHHhhh
Q 017760          142 KGRPIASGQPYFVSDGFPINTFEFIGPLLKTLDYDLPKSWLAVPHALFLGKVFSFFYSVLYPWLNRWWLPQPLILPAEVY  221 (366)
Q Consensus       142 ~~~~~~~g~~y~I~~~~~vs~~e~~~~l~~~lg~~~~~~~lp~~~~~~~a~~~e~~~~~~~~~~~~~~~~~p~l~~~ev~  221 (366)
                        .+. .+++||+++++++++.|+++.+.+ +|  .+.+..+.|...+...-...+..+.                 ...
T Consensus       315 --~~~-~g~~~~l~~~~~~s~~el~~~i~~-~g--~~~~~~~~~~~~l~~~~~~~~~~~~-----------------~~~  371 (427)
T 4f6c_A          315 --VNT-PQIIYHVLSPNKMPVKSLLECVKR-KE--IELVSDESFNEILQKQDMYETIGLT-----------------SVD  371 (427)
T ss_dssp             --SCC-CCSEEEESCSCCEEHHHHHHHHHS-SC--CEEECHHHHHHHHHHTTCHHHHHHH-----------------HHH
T ss_pred             --CCC-CCCEEEecCCCCCcHHHHHHHHHH-cC--CcccCHHHHHHHHHhcCchhhhhhh-----------------hcc
Confidence              333 789999999999999999999998 66  3334444443333221000010100                 001


Q ss_pred             hhcccceecHHHHH---HhcCCCCCCChHHHHHHHHHHHHhccc
Q 017760          222 KVGVTHYFSLLKAK---DELCYVPIVSPREGMAATISYWQDRKR  262 (366)
Q Consensus       222 ~~~~~~~~d~~ka~---~~LG~~p~~~~~e~l~~~v~~~~~~~~  262 (366)
                      .......+|+++..   +++|+.+...-++.+++.++++++...
T Consensus       372 ~~~~~~~~d~~~~~~~l~~~G~~~~~~~~~~l~~~~~~l~~~~~  415 (427)
T 4f6c_A          372 REQQLAMIDTTLTLKIMNHISEKWPTITNNWLYHWAQYIKTIFN  415 (427)
T ss_dssp             HTSEECEECCHHHHHHHHHTTCCCCCCCHHHHHHHHHHHHHHHC
T ss_pred             ccCCceeccHHHHHHHHHhcCCCCCCCCHHHHHHHHHHHHHHHh
Confidence            12224467877776   557998875556789999999887643

>3e48_A Putative nucleoside-diphosphate-sugar epimerase; alpha-beta protein., structural genomics, PSI-2, protein STR initiative; 1.60A {Staphylococcus aureus subsp}

Probab=99.79  E-value=6.7e-19  Score=163.00  Aligned_cols=155  Identities=15%  Similarity=0.123  Sum_probs=120.6

Q ss_pred             CeEEEEcCCChhHHHHHHHHHHc-CCceEEEEecCCCCcccccccCCCeEEEEcc-------------------------
Q 017760           12 KTFLVTGGLGHVGSALCLELVRR-GAYQVRAFDLRTNSPWSHLLINHGVHCIQGL-------------------------   65 (366)
Q Consensus        12 ~~VlITGgtGfiG~~L~~~L~~~-g~~~V~~~dr~~~~~~~~~~~~~~v~~i~gD-------------------------   65 (366)
                      |+|+||||||++|+++++.|.+. | ++|++++|++...  ..+...+++++++|                         
T Consensus         1 M~ilVtGatG~iG~~l~~~L~~~~g-~~V~~~~R~~~~~--~~~~~~~v~~~~~D~~d~~~l~~~~~~~d~vi~~a~~~~   77 (289)
T 3e48_A            1 MNIMLTGATGHLGTHITNQAIANHI-DHFHIGVRNVEKV--PDDWRGKVSVRQLDYFNQESMVEAFKGMDTVVFIPSIIH   77 (289)
T ss_dssp             CCEEEETTTSHHHHHHHHHHHHTTC-TTEEEEESSGGGS--CGGGBTTBEEEECCTTCHHHHHHHTTTCSEEEECCCCCC
T ss_pred             CEEEEEcCCchHHHHHHHHHhhCCC-CcEEEEECCHHHH--HHhhhCCCEEEEcCCCCHHHHHHHHhCCCEEEEeCCCCc
Confidence            57999999999999999999998 8 5899999986532  33345688888888                         


Q ss_pred             ------------------------------------------------ccCCCCCceEEEEeCCccccCCCCCCHHHHHH
Q 017760           66 ------------------------------------------------RKNNRKCLYTCAVRPAAIYGPGEERHLPRIVS   97 (366)
Q Consensus        66 ------------------------------------------------ks~~~~~l~~~ilRp~~iyGp~~~~~l~~~i~   97 (366)
                                                                      +.....+++++++||+.+||+.    ...+..
T Consensus        78 ~~~~~~~~~~~l~~aa~~~gv~~iv~~Ss~~~~~~~~~~~~~~~~~~e~~~~~~g~~~~ilrp~~~~~~~----~~~~~~  153 (289)
T 3e48_A           78 PSFKRIPEVENLVYAAKQSGVAHIIFIGYYADQHNNPFHMSPYFGYASRLLSTSGIDYTYVRMAMYMDPL----KPYLPE  153 (289)
T ss_dssp             SHHHHHHHHHHHHHHHHHTTCCEEEEEEESCCSTTCCSTTHHHHHHHHHHHHHHCCEEEEEEECEESTTH----HHHHHH
T ss_pred             cchhhHHHHHHHHHHHHHcCCCEEEEEcccCCCCCCCCccchhHHHHHHHHHHcCCCEEEEecccccccc----HHHHHH
Confidence                                                            0012347889999999999973    233333


Q ss_pred             HHHcCCCCeeecCCCcceeceeHHHHHHHHHHHHhccccCCCCCCCCCCCCCccEEecCCCCCCHHHHHHHHHHhcCCCC
Q 017760           98 LAKLGLVPFKIGEPSVKTDWIYVDNLVLALILASMGLLDDIPGQKGRPIASGQPYFVSDGFPINTFEFIGPLLKTLDYDL  177 (366)
Q Consensus        98 ~~~~g~~~~~~g~~~~~~~~v~vdDla~a~~~a~~~l~~~~~~~~~~~~~~g~~y~I~~~~~vs~~e~~~~l~~~lg~~~  177 (366)
                      ....+.  ...+.++..++|+|++|+|++++.+++           .+...|++||++ ++++|+.|+++.+.+.+|.+.
T Consensus       154 ~~~~~~--~~~~~g~~~~~~i~~~Dva~~~~~~l~-----------~~~~~g~~~~~~-~~~~s~~e~~~~~~~~~g~~~  219 (289)
T 3e48_A          154 LMNMHK--LIYPAGDGRINYITRNDIARGVIAIIK-----------NPDTWGKRYLLS-GYSYDMKELAAILSEASGTEI  219 (289)
T ss_dssp             HHHHTE--ECCCCTTCEEEEECHHHHHHHHHHHHH-----------CGGGTTCEEEEC-CEEEEHHHHHHHHHHHHTSCC
T ss_pred             HHHCCC--EecCCCCceeeeEEHHHHHHHHHHHHc-----------CCCcCCceEEeC-CCcCCHHHHHHHHHHHHCCce
Confidence            333443  335667888999999999999999997           444448899999 999999999999999999987


Q ss_pred             CccccCHHHH
Q 017760          178 PKSWLAVPHA  187 (366)
Q Consensus       178 ~~~~lp~~~~  187 (366)
                      +...+|....
T Consensus       220 ~~~~~~~~~~  229 (289)
T 3e48_A          220 KYEPVSLETF  229 (289)
T ss_dssp             EECCCCHHHH
T ss_pred             eEEeCCHHHH
Confidence            7667776543

>3i6i_A Putative leucoanthocyanidin reductase 1; rossmann fold, short chain dehydrogenase reductase, flavonoi oxidoreductase; HET: NDP; 1.75A {Vitis vinifera} PDB: 3i5m_A 3i52_A* 3i6q_A*

Probab=99.78  E-value=2e-19  Score=171.08  Aligned_cols=166  Identities=11%  Similarity=0.000  Sum_probs=124.6

Q ss_pred             ccCCeEEEEcCCChhHHHHHHHHHHcCCceEEEEecCCCCccc--c---cccCCCeEEEEcc------------------
Q 017760            9 IEGKTFLVTGGLGHVGSALCLELVRRGAYQVRAFDLRTNSPWS--H---LLINHGVHCIQGL------------------   65 (366)
Q Consensus         9 ~~~~~VlITGgtGfiG~~L~~~L~~~g~~~V~~~dr~~~~~~~--~---~~~~~~v~~i~gD------------------   65 (366)
                      |.+++|+|||||||+|+++++.|++.| ++|++++|+++....  .   .+...+++++.+|                  
T Consensus         8 M~~~~IlVtGatG~iG~~l~~~L~~~g-~~V~~l~R~~~~~~~~~~~~~~l~~~~v~~~~~Dl~d~~~l~~~~~~~~~d~   86 (346)
T 3i6i_A            8 SPKGRVLIAGATGFIGQFVATASLDAH-RPTYILARPGPRSPSKAKIFKALEDKGAIIVYGLINEQEAMEKILKEHEIDI   86 (346)
T ss_dssp             ---CCEEEECTTSHHHHHHHHHHHHTT-CCEEEEECSSCCCHHHHHHHHHHHHTTCEEEECCTTCHHHHHHHHHHTTCCE
T ss_pred             CCCCeEEEECCCcHHHHHHHHHHHHCC-CCEEEEECCCCCChhHHHHHHHHHhCCcEEEEeecCCHHHHHHHHhhCCCCE
Confidence            456799999999999999999999999 599999998733211  1   1223577788777                  


Q ss_pred             -----------------------c-----------------------------------cCCCCCceEEEEeCCccccCC
Q 017760           66 -----------------------R-----------------------------------KNNRKCLYTCAVRPAAIYGPG   87 (366)
Q Consensus        66 -----------------------k-----------------------------------s~~~~~l~~~ilRp~~iyGp~   87 (366)
                                             .                                   ..+..+++++++||+.+||..
T Consensus        87 Vi~~a~~~n~~~~~~l~~aa~~~g~v~~~v~S~~g~~~~e~~~~~p~~~y~~sK~~~e~~l~~~g~~~tivrpg~~~g~~  166 (346)
T 3i6i_A           87 VVSTVGGESILDQIALVKAMKAVGTIKRFLPSEFGHDVNRADPVEPGLNMYREKRRVRQLVEESGIPFTYICCNSIASWP  166 (346)
T ss_dssp             EEECCCGGGGGGHHHHHHHHHHHCCCSEEECSCCSSCTTTCCCCTTHHHHHHHHHHHHHHHHHTTCCBEEEECCEESSCC
T ss_pred             EEECCchhhHHHHHHHHHHHHHcCCceEEeecccCCCCCccCcCCCcchHHHHHHHHHHHHHHcCCCEEEEEeccccccc
Confidence                                   0                                   011247889999999999986


Q ss_pred             CCCCHHHHHHHHHcCCCCeeecCCCcceeceeHHHHHHHHHHHHhccccCCCCCCCCCCCCCccEEecC-CCCCCHHHHH
Q 017760           88 EERHLPRIVSLAKLGLVPFKIGEPSVKTDWIYVDNLVLALILASMGLLDDIPGQKGRPIASGQPYFVSD-GFPINTFEFI  166 (366)
Q Consensus        88 ~~~~l~~~i~~~~~g~~~~~~g~~~~~~~~v~vdDla~a~~~a~~~l~~~~~~~~~~~~~~g~~y~I~~-~~~vs~~e~~  166 (366)
                      ......... ....+....++|+++..++|+|++|+|++++.+++           .+...++.|++++ ++++|+.|++
T Consensus       167 ~~~~~~~~~-~~~~~~~~~~~g~g~~~~~~i~~~Dva~~~~~~l~-----------~~~~~~~~~~i~g~~~~~s~~e~~  234 (346)
T 3i6i_A          167 YYNNIHPSE-VLPPTDFFQIYGDGNVKAYFVAGTDIGKFTMKTVD-----------DVRTLNKSVHFRPSCNCLNINELA  234 (346)
T ss_dssp             CSCC------CCCCSSCEEEETTSCCCEEEECHHHHHHHHHHHTT-----------CGGGTTEEEECCCGGGEECHHHHH
T ss_pred             Ccccccccc-ccCCCceEEEccCCCceEEecCHHHHHHHHHHHHh-----------CccccCeEEEEeCCCCCCCHHHHH
Confidence            543322111 12244456778999999999999999999999997           4455688999985 5889999999


Q ss_pred             HHHHHhcCCCCCccccCHHHH
Q 017760          167 GPLLKTLDYDLPKSWLAVPHA  187 (366)
Q Consensus       167 ~~l~~~lg~~~~~~~lp~~~~  187 (366)
                      +.+.+.+|.+.+...+|....
T Consensus       235 ~~~~~~~g~~~~~~~~~~~~~  255 (346)
T 3i6i_A          235 SVWEKKIGRTLPRVTVTEDDL  255 (346)
T ss_dssp             HHHHHHHTSCCCEEEECHHHH
T ss_pred             HHHHHHHCCCCceEecCHHHH
Confidence            999999999988878887654

>4f6l_B AUSA reductase domain protein; thioester reductase, oxidoreductase; 3.86A {Staphylococcus aureus}

Probab=99.78  E-value=4.8e-19  Score=177.29  Aligned_cols=158  Identities=8%  Similarity=-0.057  Sum_probs=108.7

Q ss_pred             CCceEEEEeCCccccCCCCCC---------HHHHHHHHHcCCCCeeecCCCcceeceeHHHHHHHHHHHHhccccCCCCC
Q 017760           71 KCLYTCAVRPAAIYGPGEERH---------LPRIVSLAKLGLVPFKIGEPSVKTDWIYVDNLVLALILASMGLLDDIPGQ  141 (366)
Q Consensus        71 ~~l~~~ilRp~~iyGp~~~~~---------l~~~i~~~~~g~~~~~~g~~~~~~~~v~vdDla~a~~~a~~~l~~~~~~~  141 (366)
                      .+++++++||+.|||++....         +..++..+..+.... .++++..++|+|++|+|++++.+++         
T Consensus       326 ~gi~~~ilRp~~v~G~~~~~~~~~~~~~~~~~~~i~~~~~~~~~~-~~~g~~~~~~v~v~DvA~ai~~~~~---------  395 (508)
T 4f6l_B          326 NGLDGRIVRVGNLTSPYNGRWHMRNIKTNRFSMVMNDLLQLDCIG-VSMAEMPVDFSFVDTTARQIVALAQ---------  395 (508)
T ss_dssp             TTCEEEEEEECCEESCSSSCCCCTTCTTCHHHHHHHHHTTCSEEE-TTGGGSEEECEEHHHHHHHHHHHTT---------
T ss_pred             cCCCEEEEecceeccCCCCCcccCCcchHHHHHHHHHHHHcCCCC-CCccCceEEEEcHHHHHHHHHHHHh---------
Confidence            478899999999999987543         667777776655432 3456789999999999999999986         


Q ss_pred             CCCCCCCCccEEecCCCCCCHHHHHHHHHHhcCCCCCccccCHHHHHHHHHHHHHHHHhhhhccccccCCCCCCcHHhhh
Q 017760          142 KGRPIASGQPYFVSDGFPINTFEFIGPLLKTLDYDLPKSWLAVPHALFLGKVFSFFYSVLYPWLNRWWLPQPLILPAEVY  221 (366)
Q Consensus       142 ~~~~~~~g~~y~I~~~~~vs~~e~~~~l~~~lg~~~~~~~lp~~~~~~~a~~~e~~~~~~~~~~~~~~~~~p~l~~~ev~  221 (366)
                        .+. .+++||+++++++|+.|+++.+.+..   .+....+.|...+...-...+..+.                 ...
T Consensus       396 --~~~-~~~~~nl~~~~~~s~~el~~~i~~~~---~~~~~~~~w~~~l~~~~~~~~~~~~-----------------~~~  452 (508)
T 4f6l_B          396 --VNT-PQIIYHVLSPNKMPVKSLLECVKRKE---IELVSDESFNEILQKQDMYETIGLT-----------------SVD  452 (508)
T ss_dssp             --BCC-SCSEEEESCSCEEEHHHHHHHHHSSC---CEEECHHHHHHHHHTTCCHHHHHHH-----------------HTG
T ss_pred             --CCC-CCCEEEeCCCCCCCHHHHHHHHHHcC---CcccCHHHHHHHHHhcCCccchhcc-----------------ccc
Confidence              333 78899999999999999999999865   3334444444332221000000000                 001


Q ss_pred             hhcccceecHHHHH---HhcCCCCCCChHHHHHHHHHHHHhcc
Q 017760          222 KVGVTHYFSLLKAK---DELCYVPIVSPREGMAATISYWQDRK  261 (366)
Q Consensus       222 ~~~~~~~~d~~ka~---~~LG~~p~~~~~e~l~~~v~~~~~~~  261 (366)
                      .......+|+++..   +++|+.+....++.+++.++|+++.-
T Consensus       453 ~~~~~~~~d~~~~~~~l~~~G~~~~~~~~~~l~~~~~~~~~~~  495 (508)
T 4f6l_B          453 REQQLAMIDTTLTLKIMNHISEKWPTITNNWLYHWAQYIKTIF  495 (508)
T ss_dssp             GGSEECEECCHHHHHHHHHHSCCCCCCCHHHHHHHHHHHHHHH
T ss_pred             ccCcceecchHHHHHHHHHcCCCCCCCCHHHHHHHHHHHHHHH
Confidence            12234467777666   55799887666888999999887754

>2ggs_A 273AA long hypothetical DTDP-4-dehydrorhamnose reductase; alpha, beta, oxidoreductase; HET: NDP; 1.70A {Sulfolobus tokodaii}

Probab=99.76  E-value=3.4e-18  Score=156.59  Aligned_cols=128  Identities=12%  Similarity=-0.024  Sum_probs=94.5

Q ss_pred             ceEEEEeCCccccCCCCCCHHHHHHHHHcCCCCeeecCCCcceeceeHHHHHHHHHHHHhccccCCCCCCCCCCCCCccE
Q 017760           73 LYTCAVRPAAIYGPGEERHLPRIVSLAKLGLVPFKIGEPSVKTDWIYVDNLVLALILASMGLLDDIPGQKGRPIASGQPY  152 (366)
Q Consensus        73 l~~~ilRp~~iyGp~~~~~l~~~i~~~~~g~~~~~~g~~~~~~~~v~vdDla~a~~~a~~~l~~~~~~~~~~~~~~g~~y  152 (366)
                      ++++++||+.+||  +..+...++..+..+......++   .++++|++|+|++++.+++.           +  .+++|
T Consensus       144 ~~~~~iR~~~v~G--~~~~~~~~~~~~~~~~~~~~~~~---~~~~~~~~dva~~i~~~~~~-----------~--~~g~~  205 (273)
T 2ggs_A          144 DDSLIIRTSGIFR--NKGFPIYVYKTLKEGKTVFAFKG---YYSPISARKLASAILELLEL-----------R--KTGII  205 (273)
T ss_dssp             TTCEEEEECCCBS--SSSHHHHHHHHHHTTCCEEEESC---EECCCBHHHHHHHHHHHHHH-----------T--CCEEE
T ss_pred             CCeEEEecccccc--ccHHHHHHHHHHHcCCCEEeecC---CCCceEHHHHHHHHHHHHhc-----------C--cCCeE
Confidence            6789999999998  34456666677777776655554   78999999999999999973           2  24599


Q ss_pred             EecCCCCCCHHHHHHHHHHhcCCCCCccccCHHHHHHHHHHHHHHHHhhhhccccccCCCCCCcHHhhhhhcccceecHH
Q 017760          153 FVSDGFPINTFEFIGPLLKTLDYDLPKSWLAVPHALFLGKVFSFFYSVLYPWLNRWWLPQPLILPAEVYKVGVTHYFSLL  232 (366)
Q Consensus       153 ~I~~~~~vs~~e~~~~l~~~lg~~~~~~~lp~~~~~~~a~~~e~~~~~~~~~~~~~~~~~p~l~~~ev~~~~~~~~~d~~  232 (366)
                      |+++ +++|+.|+++.+.+.+|.+.+... |.+.                        . . ..+    ....+..+|++
T Consensus       206 ~i~~-~~~s~~e~~~~~~~~~g~~~~~~~-~~~~------------------------~-~-~~~----~~~~~~~~d~~  253 (273)
T 2ggs_A          206 HVAG-ERISRFELALKIKEKFNLPGEVKE-VDEV------------------------R-G-WIA----KRPYDSSLDSS  253 (273)
T ss_dssp             ECCC-CCEEHHHHHHHHHHHTTCCSCEEE-ESSC------------------------T-T-CCS----CCCSBCCBCCH
T ss_pred             EECC-CcccHHHHHHHHHHHhCCChhhcc-cccc------------------------c-c-ccc----CCCcccccCHH
Confidence            9999 999999999999999998765321 1000                        0 0 000    01123468999


Q ss_pred             HHHHhcCCCC-CCChHHHH
Q 017760          233 KAKDELCYVP-IVSPREGM  250 (366)
Q Consensus       233 ka~~~LG~~p-~~~~~e~l  250 (366)
                      |++++|||+| .+++++++
T Consensus       254 k~~~~lG~~p~~~~l~~~~  272 (273)
T 2ggs_A          254 RARKILSTDFYTLDLDGMV  272 (273)
T ss_dssp             HHHHHCSSCCCSCCGGGCC
T ss_pred             HHHHHhCCCCCCccccccc
Confidence            9999999999 57888764

>3st7_A Capsular polysaccharide synthesis enzyme CAP5F; rossmann fold, cupid domain, short-chain dehydrogenase/reduc NADPH; 2.45A {Staphylococcus aureus} PDB: 2zkl_A 3vhr_A

Probab=99.74  E-value=3.2e-19  Score=171.10  Aligned_cols=153  Identities=14%  Similarity=0.098  Sum_probs=115.7

Q ss_pred             CeEEEEcCCChhHHHHHHHHHHcCCceEEEEec-CCCCcccccccCCCe-------------------------------
Q 017760           12 KTFLVTGGLGHVGSALCLELVRRGAYQVRAFDL-RTNSPWSHLLINHGV-------------------------------   59 (366)
Q Consensus        12 ~~VlITGgtGfiG~~L~~~L~~~g~~~V~~~dr-~~~~~~~~~~~~~~v-------------------------------   59 (366)
                      |+|+|||||||+|++|+++|+++|..+|+++|+ ..+......+...++                               
T Consensus         1 M~VlVtGatG~iG~~l~~~L~~~g~~~v~~~d~~~d~~~l~~~~~~~d~Vih~a~~~~~~~~~~~~~~n~~~~~~l~~a~   80 (369)
T 3st7_A            1 MNIVITGAKGFVGKNLKADLTSTTDHHIFEVHRQTKEEELESALLKADFIVHLAGVNRPEHDKEFSLGNVSYLDHVLDIL   80 (369)
T ss_dssp             CEEEEETTTSHHHHHHHHHHHHHCCCEEEECCTTCCHHHHHHHHHHCSEEEECCCSBCTTCSTTCSSSCCBHHHHHHHHH
T ss_pred             CEEEEECCCCHHHHHHHHHHHhCCCCEEEEECCCCCHHHHHHHhccCCEEEECCcCCCCCCHHHHHHHHHHHHHHHHHHH
Confidence            589999999999999999999999328999999 332111011111111                               


Q ss_pred             -------EEEEcc-------------c---------cCCCCCceEEEEeCCccccCCCC----CCHHHHHHHHHcCCCCe
Q 017760           60 -------HCIQGL-------------R---------KNNRKCLYTCAVRPAAIYGPGEE----RHLPRIVSLAKLGLVPF  106 (366)
Q Consensus        60 -------~~i~gD-------------k---------s~~~~~l~~~ilRp~~iyGp~~~----~~l~~~i~~~~~g~~~~  106 (366)
                             .++...             |         ..++.+++++++||+++|||+..    +.++.++..+.+|..+.
T Consensus        81 ~~~~~~~~~v~~Ss~~~~~~~~Y~~sK~~~E~~~~~~~~~~g~~~~i~R~~~v~G~~~~~~~~~~~~~~~~~~~~~~~~~  160 (369)
T 3st7_A           81 TRNTKKPAILLSSSIQATQDNPYGESKLQGEQLLREYAEEYGNTVYIYRWPNLFGKWCKPNYNSVIATFCYKIARNEEIQ  160 (369)
T ss_dssp             TTCSSCCEEEEEEEGGGGSCSHHHHHHHHHHHHHHHHHHHHCCCEEEEEECEEECTTCCTTSSCHHHHHHHHHHTTCCCC
T ss_pred             HHhCCCCeEEEeCchhhcCCCCchHHHHHHHHHHHHHHHHhCCCEEEEECCceeCCCCCCCcchHHHHHHHHHHcCCCeE
Confidence                   122111             0         02235789999999999999874    46788888888888754


Q ss_pred             eecCCCcceeceeHHHHHHHHHHHHhccccCCCCCCCCCCCC-CccEEecCCCCCCHHHHHHHHHHhcCCC
Q 017760          107 KIGEPSVKTDWIYVDNLVLALILASMGLLDDIPGQKGRPIAS-GQPYFVSDGFPINTFEFIGPLLKTLDYD  176 (366)
Q Consensus       107 ~~g~~~~~~~~v~vdDla~a~~~a~~~l~~~~~~~~~~~~~~-g~~y~I~~~~~vs~~e~~~~l~~~lg~~  176 (366)
                       +++++..++++|++|+|++++.+++           .+... +++||+++++++|+.|+++.+.+.+|.+
T Consensus       161 -~~~~~~~~~~i~v~Dva~~~~~~l~-----------~~~~~~~~~~~i~~~~~~s~~e~~~~~~~~~g~~  219 (369)
T 3st7_A          161 -VNDRNVELTLNYVDDIVAEIKRAIE-----------GTPTIENGVPTVPNVFKVTLGEIVDLLYKFKQSR  219 (369)
T ss_dssp             -CSCTTCEEEEEEHHHHHHHHHHHHH-----------TCCCEETTEECCSCCEEEEHHHHHHHHHHHHHHH
T ss_pred             -ecCCCeEEEEEEHHHHHHHHHHHHh-----------CCcccCCceEEeCCCCceeHHHHHHHHHHHhCCC
Confidence             4678899999999999999999997           33332 7899999999999999999999999865

>4dqv_A Probable peptide synthetase NRP (peptide synthase; GXXGXXG motif, rossmann fold, short chain dehydrogenase/REDU family, reductase; 2.30A {Mycobacterium tuberculosis}

Probab=99.72  E-value=5.3e-17  Score=161.29  Aligned_cols=179  Identities=16%  Similarity=0.059  Sum_probs=106.6

Q ss_pred             CceEEEEeCCccccCCC-------CCCHHHHHHHHH-cCCCCe-eec---C---CCcceeceeHHHHHHHHHHHHhcccc
Q 017760           72 CLYTCAVRPAAIYGPGE-------ERHLPRIVSLAK-LGLVPF-KIG---E---PSVKTDWIYVDNLVLALILASMGLLD  136 (366)
Q Consensus        72 ~l~~~ilRp~~iyGp~~-------~~~l~~~i~~~~-~g~~~~-~~g---~---~~~~~~~v~vdDla~a~~~a~~~l~~  136 (366)
                      +++++++||++|||++.       ...+.+++.... .|..+. ..+   +   ++..++++||+|+|++++.++.....
T Consensus       268 gi~~~ivRpg~v~G~~~~~g~~~~~~~~~~l~~~~~~~g~~P~~~~~~~~~G~~~~~~~~~v~vdDvA~ai~~~~~~~~~  347 (478)
T 4dqv_A          268 ALPVAVFRCGMILADTSYAGQLNMSDWVTRMVLSLMATGIAPRSFYEPDSEGNRQRAHFDGLPVTFVAEAIAVLGARVAG  347 (478)
T ss_dssp             CCCEEEEEECEEECCSSSSSCCCTTBHHHHHHHHHHHHCEEESCSBCCCTTSCCCCCCCCEEEHHHHHHHHHHHHHTTC-
T ss_pred             CCCeEEEECceeeCCCccCCcCCHHHHHHHHHHHHHHcCcccccccccccccccccceeeeeeHHHHHHHHHHHHhhccc
Confidence            78899999999999854       123555555433 343221 111   1   26788999999999999999873211


Q ss_pred             CCCCCCCCCCCCCccEEecCCCC--CCHHHHHHHHHHhcCCCCCcc-ccCHHHHHHHHHHH---HH--HHHhhhhccccc
Q 017760          137 DIPGQKGRPIASGQPYFVSDGFP--INTFEFIGPLLKTLDYDLPKS-WLAVPHALFLGKVF---SF--FYSVLYPWLNRW  208 (366)
Q Consensus       137 ~~~~~~~~~~~~g~~y~I~~~~~--vs~~e~~~~l~~~lg~~~~~~-~lp~~~~~~~a~~~---e~--~~~~~~~~~~~~  208 (366)
                             .+...+++||++++++  +|+.|+++.+.+. |++.+.+ .+|.|+..+.+.+.   +.  ...++ |.+...
T Consensus       348 -------~~~~~~~~ynv~~~~~~~~s~~el~~~l~~~-g~~~~~i~~~~~w~~~l~~~~~~~~~~~~~~~ll-pll~~~  418 (478)
T 4dqv_A          348 -------SSLAGFATYHVMNPHDDGIGLDEYVDWLIEA-GYPIRRIDDFAEWLQRFEASLGALPDRQRRHSVL-PMLLAS  418 (478)
T ss_dssp             -------CCCCSEEEEEESCCCCSSCSHHHHHHHHHHT-TCSCEEESSHHHHHHHHHHHHHTSCHHHHHTSSS-TTCC--
T ss_pred             -------CCCCCCceEEecCCCCCCcCHHHHHHHHHHc-CCCcccCCCHHHHHHHHHHHhccCccccccCcch-hHHHHh
Confidence                   1456688999999988  9999999999995 8776655 56777777666543   11  11111 111100


Q ss_pred             cCCCCCCcHHhhhhhcccceecHHHHHHhcCCCC---CC--ChHHHHHHHHHHHHh
Q 017760          209 WLPQPLILPAEVYKVGVTHYFSLLKAKDELCYVP---IV--SPREGMAATISYWQD  259 (366)
Q Consensus       209 ~~~~p~l~~~ev~~~~~~~~~d~~ka~~~LG~~p---~~--~~~e~l~~~v~~~~~  259 (366)
                      ....+.-..........+..|.....+...|...   .+  ..++.|.++++.++.
T Consensus       419 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~  474 (478)
T 4dqv_A          419 NSQRLQPLKPTRGCSAPTDRFRAAVRAAKVGSDKDNPDIPHVSAPTIINYVTNLQL  474 (478)
T ss_dssp             CCCBCC------CCSSCCHHHHHHHHHTTCSSCSSSCCCCCCCHHHHHHHHHHHHH
T ss_pred             hccCCCCCcccccCcchHHHHHHHHHHhccCCCcCcccCCCCCHHHHHHHHHHHHh
Confidence            0000000000111122233566666677777653   22  356777877776654

>2gn4_A FLAA1 protein, UDP-GLCNAC C6 dehydratase; rossmann fold, TYK triad, SDR, enzyme, NADP, NADPH, lyase; HET: NDP UD1 MES; 1.90A {Helicobacter pylori} PDB: 2gn6_A* 2gn8_A* 2gn9_A* 2gna_A*

Probab=99.70  E-value=5.9e-17  Score=154.20  Aligned_cols=152  Identities=14%  Similarity=0.160  Sum_probs=118.2

Q ss_pred             cccCCeEEEEcCCChhHHHHHHHHHHc-CCceEEEEecCCCCccc--ccccCCCeEEEEcc-------------------
Q 017760            8 GIEGKTFLVTGGLGHVGSALCLELVRR-GAYQVRAFDLRTNSPWS--HLLINHGVHCIQGL-------------------   65 (366)
Q Consensus         8 ~~~~~~VlITGgtGfiG~~L~~~L~~~-g~~~V~~~dr~~~~~~~--~~~~~~~v~~i~gD-------------------   65 (366)
                      ++++++|+||||||++|+++++.|++. |.++|++++|++.....  ..+...+++++.+|                   
T Consensus        18 ~~~~k~vlVTGatG~iG~~l~~~L~~~~g~~~V~~~~r~~~~~~~~~~~~~~~~v~~~~~Dl~d~~~l~~~~~~~D~Vih   97 (344)
T 2gn4_A           18 MLDNQTILITGGTGSFGKCFVRKVLDTTNAKKIIVYSRDELKQSEMAMEFNDPRMRFFIGDVRDLERLNYALEGVDICIH   97 (344)
T ss_dssp             TTTTCEEEEETTTSHHHHHHHHHHHHHCCCSEEEEEESCHHHHHHHHHHHCCTTEEEEECCTTCHHHHHHHTTTCSEEEE
T ss_pred             hhCCCEEEEECCCcHHHHHHHHHHHhhCCCCEEEEEECChhhHHHHHHHhcCCCEEEEECCCCCHHHHHHHHhcCCEEEE
Confidence            356789999999999999999999999 94489999987532110  11123467777777                   


Q ss_pred             ------------------------------------------------------------------cc----CCCCCceE
Q 017760           66 ------------------------------------------------------------------RK----NNRKCLYT   75 (366)
Q Consensus        66 ------------------------------------------------------------------ks----~~~~~l~~   75 (366)
                                                                                        ++    ....++++
T Consensus        98 ~Aa~~~~~~~~~~~~~~~~~Nv~gt~~l~~aa~~~~v~~~V~~SS~~~~~p~~~Y~~sK~~~E~~~~~~~~~~~~~g~~~  177 (344)
T 2gn4_A           98 AAALKHVPIAEYNPLECIKTNIMGASNVINACLKNAISQVIALSTDKAANPINLYGATKLCSDKLFVSANNFKGSSQTQF  177 (344)
T ss_dssp             CCCCCCHHHHHHSHHHHHHHHHHHHHHHHHHHHHTTCSEEEEECCGGGSSCCSHHHHHHHHHHHHHHHGGGCCCSSCCEE
T ss_pred             CCCCCCCCchhcCHHHHHHHHHHHHHHHHHHHHhCCCCEEEEecCCccCCCccHHHHHHHHHHHHHHHHHHHhCCCCcEE
Confidence                                                                              00    12367999


Q ss_pred             EEEeCCccccCCCCCCHHHHHHHHHcCC-CCeeecCCCcceeceeHHHHHHHHHHHHhccccCCCCCCCCCCCCCccEEe
Q 017760           76 CAVRPAAIYGPGEERHLPRIVSLAKLGL-VPFKIGEPSVKTDWIYVDNLVLALILASMGLLDDIPGQKGRPIASGQPYFV  154 (366)
Q Consensus        76 ~ilRp~~iyGp~~~~~l~~~i~~~~~g~-~~~~~g~~~~~~~~v~vdDla~a~~~a~~~l~~~~~~~~~~~~~~g~~y~I  154 (366)
                      +++||+++||++. +.++.++..+..|. .+. +.+++..++|+|++|+|++++.+++.            ...|++|++
T Consensus       178 ~~vRpg~v~g~~~-~~i~~~~~~~~~g~~~~~-i~~~~~~r~~i~v~D~a~~v~~~l~~------------~~~g~~~~~  243 (344)
T 2gn4_A          178 SVVRYGNVVGSRG-SVVPFFKKLVQNKASEIP-ITDIRMTRFWITLDEGVSFVLKSLKR------------MHGGEIFVP  243 (344)
T ss_dssp             EEECCCEETTCTT-SHHHHHHHHHHHTCCCEE-ESCTTCEEEEECHHHHHHHHHHHHHH------------CCSSCEEEE
T ss_pred             EEEEeccEECCCC-CHHHHHHHHHHcCCCceE-EeCCCeEEeeEEHHHHHHHHHHHHhh------------ccCCCEEec
Confidence            9999999999975 47788888888887 544 45778889999999999999999973            235789998


Q ss_pred             cCCCCCCHHHHHHHHHHhcC
Q 017760          155 SDGFPINTFEFIGPLLKTLD  174 (366)
Q Consensus       155 ~~~~~vs~~e~~~~l~~~lg  174 (366)
                      +++ ++|+.|+++.+.+.++
T Consensus       244 ~~~-~~s~~el~~~i~~~~~  262 (344)
T 2gn4_A          244 KIP-SMKMTDLAKALAPNTP  262 (344)
T ss_dssp             CCC-EEEHHHHHHHHCTTCC
T ss_pred             CCC-cEEHHHHHHHHHHhCC
Confidence            776 5999999999987654

>3dhn_A NAD-dependent epimerase/dehydratase; reductase, PF01370, Q89Z24_bactn, NESG, BTR310, structural genomics, PSI-2; 2.00A {Bacteroides thetaiotaomicron}

Probab=99.70  E-value=5.6e-17  Score=144.58  Aligned_cols=131  Identities=21%  Similarity=0.172  Sum_probs=97.7

Q ss_pred             cCCeEEEEcCCChhHHHHHHHHHHcCCceEEEEecCCCCcccccccCCCeEEEEcc------------------------
Q 017760           10 EGKTFLVTGGLGHVGSALCLELVRRGAYQVRAFDLRTNSPWSHLLINHGVHCIQGL------------------------   65 (366)
Q Consensus        10 ~~~~VlITGgtGfiG~~L~~~L~~~g~~~V~~~dr~~~~~~~~~~~~~~v~~i~gD------------------------   65 (366)
                      +||+|+||||+||+|+++++.|+++| ++|++++|++....  .. ..+++++++|                        
T Consensus         3 ~m~~ilItGatG~iG~~l~~~L~~~g-~~V~~~~r~~~~~~--~~-~~~~~~~~~Dl~d~~~~~~~~~~~d~vi~~a~~~   78 (227)
T 3dhn_A            3 KVKKIVLIGASGFVGSALLNEALNRG-FEVTAVVRHPEKIK--IE-NEHLKVKKADVSSLDEVCEVCKGADAVISAFNPG   78 (227)
T ss_dssp             CCCEEEEETCCHHHHHHHHHHHHTTT-CEEEEECSCGGGCC--CC-CTTEEEECCCTTCHHHHHHHHTTCSEEEECCCC-
T ss_pred             CCCEEEEEcCCchHHHHHHHHHHHCC-CEEEEEEcCcccch--hc-cCceEEEEecCCCHHHHHHHhcCCCEEEEeCcCC
Confidence            35899999999999999999999999 59999999864321  11 2567777777                        


Q ss_pred             --------------------------------------------------------------------cc-CCCCCceEE
Q 017760           66 --------------------------------------------------------------------RK-NNRKCLYTC   76 (366)
Q Consensus        66 --------------------------------------------------------------------ks-~~~~~l~~~   76 (366)
                                                                                          +. .+..+++++
T Consensus        79 ~~~~~~~~~n~~~~~~l~~~~~~~~~~~~v~~Ss~~~~~~~~~~~~~~~~~~p~~~Y~~sK~~~e~~~~~~~~~~~~~~~  158 (227)
T 3dhn_A           79 WNNPDIYDETIKVYLTIIDGVKKAGVNRFLMVGGAGSLFIAPGLRLMDSGEVPENILPGVKALGEFYLNFLMKEKEIDWV  158 (227)
T ss_dssp             -----CCSHHHHHHHHHHHHHHHTTCSEEEEECCSTTSEEETTEEGGGTTCSCGGGHHHHHHHHHHHHHTGGGCCSSEEE
T ss_pred             CCChhHHHHHHHHHHHHHHHHHHhCCCEEEEeCChhhccCCCCCccccCCcchHHHHHHHHHHHHHHHHHHhhccCccEE
Confidence                                                                                01 236689999


Q ss_pred             EEeCCccccCCCCCCHHHHHHHHHcCCCCeeecCCCcceeceeHHHHHHHHHHHHhccccCCCCCCCCCCCCCccEEecC
Q 017760           77 AVRPAAIYGPGEERHLPRIVSLAKLGLVPFKIGEPSVKTDWIYVDNLVLALILASMGLLDDIPGQKGRPIASGQPYFVSD  156 (366)
Q Consensus        77 ilRp~~iyGp~~~~~l~~~i~~~~~g~~~~~~g~~~~~~~~v~vdDla~a~~~a~~~l~~~~~~~~~~~~~~g~~y~I~~  156 (366)
                      ++||+.+|||++....      ...+....... ++. ++|+|++|+|++++.+++           .+...|+.|++++
T Consensus       159 ilrp~~v~g~~~~~~~------~~~~~~~~~~~-~~~-~~~i~~~Dva~ai~~~l~-----------~~~~~g~~~~~~~  219 (227)
T 3dhn_A          159 FFSPAADMRPGVRTGR------YRLGKDDMIVD-IVG-NSHISVEDYAAAMIDELE-----------HPKHHQERFTIGY  219 (227)
T ss_dssp             EEECCSEEESCCCCCC------CEEESSBCCCC-TTS-CCEEEHHHHHHHHHHHHH-----------SCCCCSEEEEEEC
T ss_pred             EEeCCcccCCCccccc------eeecCCCcccC-CCC-CcEEeHHHHHHHHHHHHh-----------CccccCcEEEEEe
Confidence            9999999999864211      11222222221 222 899999999999999998           6677899999999


Q ss_pred             CCCCCHH
Q 017760          157 GFPINTF  163 (366)
Q Consensus       157 ~~~vs~~  163 (366)
                      +++.++.
T Consensus       220 ~~~~~~~  226 (227)
T 3dhn_A          220 LEHHHHH  226 (227)
T ss_dssp             CSCCC--
T ss_pred             ehhcccC
Confidence            9998765

>2wm3_A NMRA-like family domain containing protein 1; unknown function; HET: NAP NFL; 1.85A {Homo sapiens} PDB: 2wmd_A* 2exx_A* 3dxf_A 3e5m_A

Probab=99.68  E-value=2e-17  Score=153.91  Aligned_cols=163  Identities=18%  Similarity=0.120  Sum_probs=117.8

Q ss_pred             CCeEEEEcCCChhHHHHHHHHHHcC-CceEEEEecCCCCcccccccCCCeEEEEcc------------------------
Q 017760           11 GKTFLVTGGLGHVGSALCLELVRRG-AYQVRAFDLRTNSPWSHLLINHGVHCIQGL------------------------   65 (366)
Q Consensus        11 ~~~VlITGgtGfiG~~L~~~L~~~g-~~~V~~~dr~~~~~~~~~~~~~~v~~i~gD------------------------   65 (366)
                      +++|+||||||++|+++++.|+++| + +|++++|++.......+...+++++++|                        
T Consensus         5 ~~~ilVtGatG~iG~~l~~~L~~~g~~-~V~~~~R~~~~~~~~~l~~~~~~~~~~D~~d~~~l~~~~~~~d~vi~~a~~~   83 (299)
T 2wm3_A            5 KKLVVVFGGTGAQGGSVARTLLEDGTF-KVRVVTRNPRKKAAKELRLQGAEVVQGDQDDQVIMELALNGAYATFIVTNYW   83 (299)
T ss_dssp             CCEEEEETTTSHHHHHHHHHHHHHCSS-EEEEEESCTTSHHHHHHHHTTCEEEECCTTCHHHHHHHHTTCSEEEECCCHH
T ss_pred             CCEEEEECCCchHHHHHHHHHHhcCCc-eEEEEEcCCCCHHHHHHHHCCCEEEEecCCCHHHHHHHHhcCCEEEEeCCCC
Confidence            5789999999999999999999988 5 8999999865432222233567777777                        


Q ss_pred             -----------------------------cc--------------------------CCCCCceEEEEeCCccccCCCCC
Q 017760           66 -----------------------------RK--------------------------NNRKCLYTCAVRPAAIYGPGEER   90 (366)
Q Consensus        66 -----------------------------ks--------------------------~~~~~l~~~ilRp~~iyGp~~~~   90 (366)
                                                   -|                          .+..+++++++||+.+||+....
T Consensus        84 ~~~~~~~~~~~~~~~~~aa~~~gv~~iv~~S~~~~~~~~~~~~~~~y~~sK~~~e~~~~~~gi~~~ilrp~~~~~~~~~~  163 (299)
T 2wm3_A           84 ESCSQEQEVKQGKLLADLARRLGLHYVVYSGLENIKKLTAGRLAAAHFDGKGEVEEYFRDIGVPMTSVRLPCYFENLLSH  163 (299)
T ss_dssp             HHTCHHHHHHHHHHHHHHHHHHTCSEEEECCCCCHHHHTTTSCCCHHHHHHHHHHHHHHHHTCCEEEEECCEEGGGGGTT
T ss_pred             ccccchHHHHHHHHHHHHHHHcCCCEEEEEcCccccccCCCcccCchhhHHHHHHHHHHHCCCCEEEEeecHHhhhchhh
Confidence                                         00                          01136889999999999975332


Q ss_pred             CHHHHHHHHHcCCC-CeeecCCCcceeceeHHHHHHHHHHHHhccccCCCCCCCCCCCCCccEEecCCCCCCHHHHHHHH
Q 017760           91 HLPRIVSLAKLGLV-PFKIGEPSVKTDWIYVDNLVLALILASMGLLDDIPGQKGRPIASGQPYFVSDGFPINTFEFIGPL  169 (366)
Q Consensus        91 ~l~~~i~~~~~g~~-~~~~g~~~~~~~~v~vdDla~a~~~a~~~l~~~~~~~~~~~~~~g~~y~I~~~~~vs~~e~~~~l  169 (366)
                      +.+.   ....|+. ....+.++...+|+|++|+|+++..+++.          .+...|+.|++++ +++|+.|+++.+
T Consensus       164 ~~~~---~~~~g~~~~~~~~~~~~~~~~i~~~Dva~~~~~~l~~----------~~~~~g~~~~~~g-~~~s~~e~~~~~  229 (299)
T 2wm3_A          164 FLPQ---KAPDGKSYLLSLPTGDVPMDGMSVSDLGPVVLSLLKM----------PEKYVGQNIGLST-CRHTAEEYAALL  229 (299)
T ss_dssp             TCCE---ECTTSSSEEECCCCTTSCEEEECGGGHHHHHHHHHHS----------HHHHTTCEEECCS-EEECHHHHHHHH
T ss_pred             cCCc---ccCCCCEEEEEecCCCCccceecHHHHHHHHHHHHcC----------hhhhCCeEEEeee-ccCCHHHHHHHH
Confidence            1111   1123422 12233467789999999999999999862          1123578999986 679999999999


Q ss_pred             HHhcCCCCCccccCHHHHH
Q 017760          170 LKTLDYDLPKSWLAVPHAL  188 (366)
Q Consensus       170 ~~~lg~~~~~~~lp~~~~~  188 (366)
                      .+.+|.+.+...+|.+...
T Consensus       230 ~~~~g~~~~~~~~~~~~~~  248 (299)
T 2wm3_A          230 TKHTRKVVHDAKMTPEDYE  248 (299)
T ss_dssp             HHHHSSCEEECCCCTHHHH
T ss_pred             HHHHCCCceeEecCHHHHH
Confidence            9999988776777766553

>1xgk_A Nitrogen metabolite repression regulator NMRA; rossmann fold, transcriptional regulation, short chain dehyd reductase, NADP binding; 1.40A {Emericella nidulans} SCOP: c.2.1.2 PDB: 1k6x_A* 1k6j_A 1k6i_A* 1ti7_A* 2vus_A 2vut_A* 2vuu_A*

Probab=99.65  E-value=1.4e-17  Score=158.97  Aligned_cols=165  Identities=16%  Similarity=0.127  Sum_probs=113.7

Q ss_pred             cCCeEEEEcCCChhHHHHHHHHHHcCCceEEEEecCCCCccccccc-CCCeEEEEcc-----------------------
Q 017760           10 EGKTFLVTGGLGHVGSALCLELVRRGAYQVRAFDLRTNSPWSHLLI-NHGVHCIQGL-----------------------   65 (366)
Q Consensus        10 ~~~~VlITGgtGfiG~~L~~~L~~~g~~~V~~~dr~~~~~~~~~~~-~~~v~~i~gD-----------------------   65 (366)
                      .+++|+|||||||+|+++++.|+++| ++|++++|++.......+. ..+++++.+|                       
T Consensus         4 ~~~~ilVtGatG~iG~~l~~~L~~~g-~~V~~~~R~~~~~~~~~l~~~~~v~~v~~D~l~d~~~l~~~~~~~d~Vi~~a~   82 (352)
T 1xgk_A            4 QKKTIAVVGATGRQGASLIRVAAAVG-HHVRAQVHSLKGLIAEELQAIPNVTLFQGPLLNNVPLMDTLFEGAHLAFINTT   82 (352)
T ss_dssp             CCCCEEEESTTSHHHHHHHHHHHHTT-CCEEEEESCSCSHHHHHHHTSTTEEEEESCCTTCHHHHHHHHTTCSEEEECCC
T ss_pred             CCCEEEEECCCCHHHHHHHHHHHhCC-CEEEEEECCCChhhHHHHhhcCCcEEEECCccCCHHHHHHHHhcCCEEEEcCC
Confidence            35789999999999999999999999 5899999876542100010 1123333333                       


Q ss_pred             --------------------c-c--------------------------------CCCCCceEEEEeCCccccCCCCCCH
Q 017760           66 --------------------R-K--------------------------------NNRKCLYTCAVRPAAIYGPGEERHL   92 (366)
Q Consensus        66 --------------------k-s--------------------------------~~~~~l~~~ilRp~~iyGp~~~~~l   92 (366)
                                          . .                                ....+++++++||+ +||++.....
T Consensus        83 ~~~~~~~~~~~~l~~aa~~~g~v~~~V~~SS~~~~~~~~~~~~~y~~sK~~~E~~~~~~gi~~~ivrpg-~~g~~~~~~~  161 (352)
T 1xgk_A           83 SQAGDEIAIGKDLADAAKRAGTIQHYIYSSMPDHSLYGPWPAVPMWAPKFTVENYVRQLGLPSTFVYAG-IYNNNFTSLP  161 (352)
T ss_dssp             STTSCHHHHHHHHHHHHHHHSCCSEEEEEECCCGGGTSSCCCCTTTHHHHHHHHHHHTSSSCEEEEEEC-EEGGGCBSSS
T ss_pred             CCCcHHHHHHHHHHHHHHHcCCccEEEEeCCccccccCCCCCccHHHHHHHHHHHHHHcCCCEEEEecc-eecCCchhcc
Confidence                                0 0                                11236889999975 7998764322


Q ss_pred             HHHHHH--HHcCCCC-eeecCCCcceeceeH-HHHHHHHHHHHhccccCCCCCCCCC-CCCCccEEecCCCCCCHHHHHH
Q 017760           93 PRIVSL--AKLGLVP-FKIGEPSVKTDWIYV-DNLVLALILASMGLLDDIPGQKGRP-IASGQPYFVSDGFPINTFEFIG  167 (366)
Q Consensus        93 ~~~i~~--~~~g~~~-~~~g~~~~~~~~v~v-dDla~a~~~a~~~l~~~~~~~~~~~-~~~g~~y~I~~~~~vs~~e~~~  167 (366)
                      ..++..  ...|... ..++++++..+++|+ +|+|++++.+++.          .+ ...|++||+++ +++|+.|+++
T Consensus       162 ~~~~~~~~~~~g~~~~~~~~~~~~~~~~i~v~~Dva~ai~~~l~~----------~~~~~~g~~~~l~~-~~~s~~e~~~  230 (352)
T 1xgk_A          162 YPLFQMELMPDGTFEWHAPFDPDIPLPWLDAEHDVGPALLQIFKD----------GPQKWNGHRIALTF-ETLSPVQVCA  230 (352)
T ss_dssp             CSSCBEEECTTSCEEEEESSCTTSCEEEECHHHHHHHHHHHHHHH----------CHHHHTTCEEEECS-EEECHHHHHH
T ss_pred             cccccccccCCCceEEeeccCCCCceeeEecHHHHHHHHHHHHhC----------CchhhCCeEEEEec-CCCCHHHHHH
Confidence            111111  1234432 235677888999999 9999999999972          11 23588999996 5699999999


Q ss_pred             HHHHhcCCCCCccccCHHHH
Q 017760          168 PLLKTLDYDLPKSWLAVPHA  187 (366)
Q Consensus       168 ~l~~~lg~~~~~~~lp~~~~  187 (366)
                      .+.+.+|.+.+...+|.+..
T Consensus       231 ~i~~~~G~~~~~~~vp~~~~  250 (352)
T 1xgk_A          231 AFSRALNRRVTYVQVPKVEI  250 (352)
T ss_dssp             HHHHHHTSCEEEEECSSCCC
T ss_pred             HHHHHHCCCCceEECCHHHH
Confidence            99999999877777775443

>2r6j_A Eugenol synthase 1; phenylpropene, PIP reductase, short-chain dehydrogenase/reductase, plant protein; HET: NDP; 1.50A {Ocimum basilicum} PDB: 2qys_A 2qx7_A* 2qzz_A* 2r2g_A* 3c3x_A* 2qw8_A*

Probab=99.61  E-value=5.1e-16  Score=145.61  Aligned_cols=161  Identities=14%  Similarity=0.106  Sum_probs=117.6

Q ss_pred             CCeEEEEcCCChhHHHHHHHHHHcCCceEEEEecCCCCccc--ccccCCCeEEEEcc-----------------------
Q 017760           11 GKTFLVTGGLGHVGSALCLELVRRGAYQVRAFDLRTNSPWS--HLLINHGVHCIQGL-----------------------   65 (366)
Q Consensus        11 ~~~VlITGgtGfiG~~L~~~L~~~g~~~V~~~dr~~~~~~~--~~~~~~~v~~i~gD-----------------------   65 (366)
                      +++|+||||||++|+++++.|+++| ++|++++|+++....  ..+...+++++++|                       
T Consensus        11 ~~~ilVtGatG~iG~~l~~~L~~~g-~~V~~l~R~~~~~~~~~~~l~~~~v~~v~~Dl~d~~~l~~a~~~~d~vi~~a~~   89 (318)
T 2r6j_A           11 KSKILIFGGTGYIGNHMVKGSLKLG-HPTYVFTRPNSSKTTLLDEFQSLGAIIVKGELDEHEKLVELMKKVDVVISALAF   89 (318)
T ss_dssp             CCCEEEETTTSTTHHHHHHHHHHTT-CCEEEEECTTCSCHHHHHHHHHTTCEEEECCTTCHHHHHHHHTTCSEEEECCCG
T ss_pred             CCeEEEECCCchHHHHHHHHHHHCC-CcEEEEECCCCchhhHHHHhhcCCCEEEEecCCCHHHHHHHHcCCCEEEECCch
Confidence            3589999999999999999999999 589999998752110  11223578888888                       


Q ss_pred             ----------------c-c--------C--------------------------CCCCceEEEEeCCccccCCCCCCHHH
Q 017760           66 ----------------R-K--------N--------------------------NRKCLYTCAVRPAAIYGPGEERHLPR   94 (366)
Q Consensus        66 ----------------k-s--------~--------------------------~~~~l~~~ilRp~~iyGp~~~~~l~~   94 (366)
                                      . .        .                          +..+++++++||+.+++.    .++.
T Consensus        90 ~~~~~~~~l~~aa~~~g~v~~~v~S~~g~~~~~~~~~~p~~~~y~sK~~~e~~~~~~~~~~~~lr~~~~~~~----~~~~  165 (318)
T 2r6j_A           90 PQILDQFKILEAIKVAGNIKRFLPSDFGVEEDRINALPPFEALIERKRMIRRAIEEANIPYTYVSANCFASY----FINY  165 (318)
T ss_dssp             GGSTTHHHHHHHHHHHCCCCEEECSCCSSCTTTCCCCHHHHHHHHHHHHHHHHHHHTTCCBEEEECCEEHHH----HHHH
T ss_pred             hhhHHHHHHHHHHHhcCCCCEEEeeccccCcccccCCCCcchhHHHHHHHHHHHHhcCCCeEEEEcceehhh----hhhh
Confidence                            0 0        0                          012467788888766653    2233


Q ss_pred             HHHHHHcCCCCeeecCCCcceeceeHHHHHHHHHHHHhccccCCCCCCCCCCCCCccEEecC-CCCCCHHHHHHHHHHhc
Q 017760           95 IVSLAKLGLVPFKIGEPSVKTDWIYVDNLVLALILASMGLLDDIPGQKGRPIASGQPYFVSD-GFPINTFEFIGPLLKTL  173 (366)
Q Consensus        95 ~i~~~~~g~~~~~~g~~~~~~~~v~vdDla~a~~~a~~~l~~~~~~~~~~~~~~g~~y~I~~-~~~vs~~e~~~~l~~~l  173 (366)
                      +......+.....+++++..++++|++|++++++.+++           .+...++.|++++ ++.+|+.|+++.+.+.+
T Consensus       166 ~~~~~~~~~~~~~~~~~~~~~~~i~~~Dva~~~~~~l~-----------~~~~~~~~~~~~g~~~~~s~~e~~~~~~~~~  234 (318)
T 2r6j_A          166 LLRPYDPKDEITVYGTGEAKFAMNYEQDIGLYTIKVAT-----------DPRALNRVVIYRPSTNIITQLELISRWEKKI  234 (318)
T ss_dssp             HHCTTCCCSEEEEETTSCCEEEEECHHHHHHHHHHHTT-----------CGGGTTEEEECCCGGGEEEHHHHHHHHHHHH
T ss_pred             hccccCCCCceEEecCCCceeeEeeHHHHHHHHHHHhc-----------CccccCeEEEecCCCCccCHHHHHHHHHHHh
Confidence            33222233444567888899999999999999999986           3334577888875 47899999999999999


Q ss_pred             CCCCCccccCHHHH
Q 017760          174 DYDLPKSWLAVPHA  187 (366)
Q Consensus       174 g~~~~~~~lp~~~~  187 (366)
                      |.+.+...+|....
T Consensus       235 g~~~~~~~~~~~~~  248 (318)
T 2r6j_A          235 GKKFKKIHVPEEEI  248 (318)
T ss_dssp             TCCCEEEEECHHHH
T ss_pred             CCCCceeecCHHHH
Confidence            99888778887654

>3e8x_A Putative NAD-dependent epimerase/dehydratase; structural genomics, APC7755, NADP, P protein structure initiative; HET: MSE NAP; 2.10A {Bacillus halodurans}

Probab=99.59  E-value=1.3e-15  Score=136.84  Aligned_cols=135  Identities=19%  Similarity=0.119  Sum_probs=100.8

Q ss_pred             cccCCeEEEEcCCChhHHHHHHHHHHcCCceEEEEecCCCCcccccccCCCe-EEEEcc---------------------
Q 017760            8 GIEGKTFLVTGGLGHVGSALCLELVRRGAYQVRAFDLRTNSPWSHLLINHGV-HCIQGL---------------------   65 (366)
Q Consensus         8 ~~~~~~VlITGgtGfiG~~L~~~L~~~g~~~V~~~dr~~~~~~~~~~~~~~v-~~i~gD---------------------   65 (366)
                      .+++|+|+||||||++|++++++|+++| ++|++++|++...  ..+...++ +++++|                     
T Consensus        18 ~l~~~~ilVtGatG~iG~~l~~~L~~~G-~~V~~~~R~~~~~--~~~~~~~~~~~~~~Dl~~~~~~~~~~~D~vi~~ag~   94 (236)
T 3e8x_A           18 YFQGMRVLVVGANGKVARYLLSELKNKG-HEPVAMVRNEEQG--PELRERGASDIVVANLEEDFSHAFASIDAVVFAAGS   94 (236)
T ss_dssp             ---CCEEEEETTTSHHHHHHHHHHHHTT-CEEEEEESSGGGH--HHHHHTTCSEEEECCTTSCCGGGGTTCSEEEECCCC
T ss_pred             CcCCCeEEEECCCChHHHHHHHHHHhCC-CeEEEEECChHHH--HHHHhCCCceEEEcccHHHHHHHHcCCCEEEECCCC
Confidence            4667899999999999999999999999 5999999986432  22222355 666665                     


Q ss_pred             -------------------------------------------c---c---------------CCCCCceEEEEeCCccc
Q 017760           66 -------------------------------------------R---K---------------NNRKCLYTCAVRPAAIY   84 (366)
Q Consensus        66 -------------------------------------------k---s---------------~~~~~l~~~ilRp~~iy   84 (366)
                                                                 .   .               .+..+++++++||+.+|
T Consensus        95 ~~~~~~~~~~~~n~~~~~~l~~a~~~~~~~~iv~~SS~~~~~~~~~~~~~~~Y~~sK~~~e~~~~~~gi~~~~lrpg~v~  174 (236)
T 3e8x_A           95 GPHTGADKTILIDLWGAIKTIQEAEKRGIKRFIMVSSVGTVDPDQGPMNMRHYLVAKRLADDELKRSSLDYTIVRPGPLS  174 (236)
T ss_dssp             CTTSCHHHHHHTTTHHHHHHHHHHHHHTCCEEEEECCTTCSCGGGSCGGGHHHHHHHHHHHHHHHHSSSEEEEEEECSEE
T ss_pred             CCCCCccccchhhHHHHHHHHHHHHHcCCCEEEEEecCCCCCCCCChhhhhhHHHHHHHHHHHHHHCCCCEEEEeCCccc
Confidence                                                       0   0               12457899999999999


Q ss_pred             cCCCCCCHHHHHHHHHcCCCCeeecCCCcceeceeHHHHHHHHHHHHhccccCCCCCCCCCCCCCccEEecCCCCCCHHH
Q 017760           85 GPGEERHLPRIVSLAKLGLVPFKIGEPSVKTDWIYVDNLVLALILASMGLLDDIPGQKGRPIASGQPYFVSDGFPINTFE  164 (366)
Q Consensus        85 Gp~~~~~l~~~i~~~~~g~~~~~~g~~~~~~~~v~vdDla~a~~~a~~~l~~~~~~~~~~~~~~g~~y~I~~~~~vs~~e  164 (366)
                      |+....            . ....+++....+++|++|+|++++.+++           .+...|+.|+++++ ++++.|
T Consensus       175 ~~~~~~------------~-~~~~~~~~~~~~~i~~~Dva~~~~~~~~-----------~~~~~g~~~~v~~~-~~~~~e  229 (236)
T 3e8x_A          175 NEESTG------------K-VTVSPHFSEITRSITRHDVAKVIAELVD-----------QQHTIGKTFEVLNG-DTPIAK  229 (236)
T ss_dssp             CSCCCS------------E-EEEESSCSCCCCCEEHHHHHHHHHHHTT-----------CGGGTTEEEEEEEC-SEEHHH
T ss_pred             CCCCCC------------e-EEeccCCCcccCcEeHHHHHHHHHHHhc-----------CccccCCeEEEeCC-CcCHHH
Confidence            996532            1 1233455567899999999999999997           44467899999888 599999


Q ss_pred             HHHHHH
Q 017760          165 FIGPLL  170 (366)
Q Consensus       165 ~~~~l~  170 (366)
                      +++.+.
T Consensus       230 ~~~~i~  235 (236)
T 3e8x_A          230 VVEQLG  235 (236)
T ss_dssp             HHHTC-
T ss_pred             HHHHhc
Confidence            988764

>3c1o_A Eugenol synthase; phenylpropene, PIP reductase, short-chain dehydrogenase/reductase, oxidoreductase; HET: NAP; 1.80A {Clarkia breweri}

Probab=99.59  E-value=7.3e-16  Score=144.63  Aligned_cols=162  Identities=12%  Similarity=0.042  Sum_probs=118.5

Q ss_pred             cCCeEEEEcCCChhHHHHHHHHHHcCCceEEEEecCC-CCc---ccc---cccCCCeEEEEcc-----------------
Q 017760           10 EGKTFLVTGGLGHVGSALCLELVRRGAYQVRAFDLRT-NSP---WSH---LLINHGVHCIQGL-----------------   65 (366)
Q Consensus        10 ~~~~VlITGgtGfiG~~L~~~L~~~g~~~V~~~dr~~-~~~---~~~---~~~~~~v~~i~gD-----------------   65 (366)
                      +|++|+||||||++|+++++.|+++| ++|++++|++ +..   ...   .+...+++++++|                 
T Consensus         3 ~~~~ilVtGatG~iG~~l~~~L~~~g-~~V~~~~R~~~~~~~~~~~~~l~~~~~~~v~~v~~D~~d~~~l~~a~~~~d~v   81 (321)
T 3c1o_A            3 HMEKIIIYGGTGYIGKFMVRASLSFS-HPTFIYARPLTPDSTPSSVQLREEFRSMGVTIIEGEMEEHEKMVSVLKQVDIV   81 (321)
T ss_dssp             -CCCEEEETTTSTTHHHHHHHHHHTT-CCEEEEECCCCTTCCHHHHHHHHHHHHTTCEEEECCTTCHHHHHHHHTTCSEE
T ss_pred             cccEEEEEcCCchhHHHHHHHHHhCC-CcEEEEECCcccccChHHHHHHHHhhcCCcEEEEecCCCHHHHHHHHcCCCEE
Confidence            45789999999999999999999999 5899999986 211   111   1123578888888                 


Q ss_pred             --------------------ccC----------C---------------------------CCCceEEEEeCCccccCCC
Q 017760           66 --------------------RKN----------N---------------------------RKCLYTCAVRPAAIYGPGE   88 (366)
Q Consensus        66 --------------------ks~----------~---------------------------~~~l~~~ilRp~~iyGp~~   88 (366)
                                          +..          .                           ..+++++++||+.++|+. 
T Consensus        82 i~~a~~~~~~~~~~l~~aa~~~g~v~~~v~S~~g~~~~~~~~~~p~~~~y~sK~~~e~~~~~~~~~~~~lrp~~~~~~~-  160 (321)
T 3c1o_A           82 ISALPFPMISSQIHIINAIKAAGNIKRFLPSDFGCEEDRIKPLPPFESVLEKKRIIRRAIEAAALPYTYVSANCFGAYF-  160 (321)
T ss_dssp             EECCCGGGSGGGHHHHHHHHHHCCCCEEECSCCSSCGGGCCCCHHHHHHHHHHHHHHHHHHHHTCCBEEEECCEEHHHH-
T ss_pred             EECCCccchhhHHHHHHHHHHhCCccEEeccccccCccccccCCCcchHHHHHHHHHHHHHHcCCCeEEEEeceecccc-
Confidence                                000          0                           114678888888777752 


Q ss_pred             CCCHHHHHHH---HHcCCCCeeecCCCcceeceeHHHHHHHHHHHHhccccCCCCCCCCCCCCCccEEecC-CCCCCHHH
Q 017760           89 ERHLPRIVSL---AKLGLVPFKIGEPSVKTDWIYVDNLVLALILASMGLLDDIPGQKGRPIASGQPYFVSD-GFPINTFE  164 (366)
Q Consensus        89 ~~~l~~~i~~---~~~g~~~~~~g~~~~~~~~v~vdDla~a~~~a~~~l~~~~~~~~~~~~~~g~~y~I~~-~~~vs~~e  164 (366)
                         ++.+...   ...+.....+++++..++++|++|+++++..+++           .+...|+.|++++ ++++|+.|
T Consensus       161 ---~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~Dva~~~~~~l~-----------~~~~~g~~~~~~g~~~~~t~~e  226 (321)
T 3c1o_A          161 ---VNYLLHPSPHPNRNDDIVIYGTGETKFVLNYEEDIAKYTIKVAC-----------DPRCCNRIVIYRPPKNIISQNE  226 (321)
T ss_dssp             ---HHHHHCCCSSCCTTSCEEEETTSCCEEEEECHHHHHHHHHHHHH-----------CGGGTTEEEECCCGGGEEEHHH
T ss_pred             ---ccccccccccccccCceEEecCCCcceeEeeHHHHHHHHHHHHh-----------CccccCeEEEEeCCCCcccHHH
Confidence               2222211   1123344567888899999999999999999997           4444578889886 47899999


Q ss_pred             HHHHHHHhcCCCCCccccCHHHH
Q 017760          165 FIGPLLKTLDYDLPKSWLAVPHA  187 (366)
Q Consensus       165 ~~~~l~~~lg~~~~~~~lp~~~~  187 (366)
                      +++.+.+.+|.+.+...+|....
T Consensus       227 ~~~~~~~~~g~~~~~~~~~~~~~  249 (321)
T 3c1o_A          227 LISLWEAKSGLSFKKVHMPDEQL  249 (321)
T ss_dssp             HHHHHHHHHTSCCCEEEECHHHH
T ss_pred             HHHHHHHHcCCcceeeeCCHHHH
Confidence            99999999999888888886554

>1qyd_A Pinoresinol-lariciresinol reductase; NADPH-dependent aromatic alcohol reductases, pcber, PLR, IFR, lignans, isoflavonoids, plant protein; 2.50A {Thuja plicata} SCOP: c.2.1.2

Probab=99.58  E-value=5.2e-16  Score=144.93  Aligned_cols=164  Identities=13%  Similarity=0.090  Sum_probs=113.8

Q ss_pred             CCeEEEEcCCChhHHHHHHHHHHcCCceEEEEecCCCCc---ccc---cccCCCeEEEEcc-------------------
Q 017760           11 GKTFLVTGGLGHVGSALCLELVRRGAYQVRAFDLRTNSP---WSH---LLINHGVHCIQGL-------------------   65 (366)
Q Consensus        11 ~~~VlITGgtGfiG~~L~~~L~~~g~~~V~~~dr~~~~~---~~~---~~~~~~v~~i~gD-------------------   65 (366)
                      +++|+||||||++|+++++.|+++| ++|++++|+++..   ...   .+...+++++++|                   
T Consensus         4 ~~~ilVtGatG~iG~~l~~~L~~~g-~~V~~~~R~~~~~~~~~~~~~~~~~~~~~~~~~~D~~d~~~l~~~~~~~d~vi~   82 (313)
T 1qyd_A            4 KSRVLIVGGTGYIGKRIVNASISLG-HPTYVLFRPEVVSNIDKVQMLLYFKQLGAKLIEASLDDHQRLVDALKQVDVVIS   82 (313)
T ss_dssp             CCCEEEESTTSTTHHHHHHHHHHTT-CCEEEECCSCCSSCHHHHHHHHHHHTTTCEEECCCSSCHHHHHHHHTTCSEEEE
T ss_pred             CCEEEEEcCCcHHHHHHHHHHHhCC-CcEEEEECCCcccchhHHHHHHHHHhCCeEEEeCCCCCHHHHHHHHhCCCEEEE
Confidence            5789999999999999999999999 5899999986432   111   1224577888888                   


Q ss_pred             ----------------------ccC--------------------------------------CCCCceEEEEeCCcccc
Q 017760           66 ----------------------RKN--------------------------------------NRKCLYTCAVRPAAIYG   85 (366)
Q Consensus        66 ----------------------ks~--------------------------------------~~~~l~~~ilRp~~iyG   85 (366)
                                            ++.                                      +..+++++++||+.++|
T Consensus        83 ~a~~~~~~~~~~~~~~l~~aa~~~g~v~~~v~S~~g~~~~~~~~~~~p~~~~y~sK~~~e~~~~~~g~~~~ilrp~~~~~  162 (313)
T 1qyd_A           83 ALAGGVLSHHILEQLKLVEAIKEAGNIKRFLPSEFGMDPDIMEHALQPGSITFIDKRKVRRAIEAASIPYTYVSSNMFAG  162 (313)
T ss_dssp             CCCCSSSSTTTTTHHHHHHHHHHSCCCSEEECSCCSSCTTSCCCCCSSTTHHHHHHHHHHHHHHHTTCCBCEEECCEEHH
T ss_pred             CCccccchhhHHHHHHHHHHHHhcCCCceEEecCCcCCccccccCCCCCcchHHHHHHHHHHHHhcCCCeEEEEeceecc
Confidence                                  000                                      00145677777776666


Q ss_pred             CCCCCCHHHHHHHHHcCCCCeeecCCCcceeceeHHHHHHHHHHHHhccccCCCCCCCCCCCCCccEEecCC-CCCCHHH
Q 017760           86 PGEERHLPRIVSLAKLGLVPFKIGEPSVKTDWIYVDNLVLALILASMGLLDDIPGQKGRPIASGQPYFVSDG-FPINTFE  164 (366)
Q Consensus        86 p~~~~~l~~~i~~~~~g~~~~~~g~~~~~~~~v~vdDla~a~~~a~~~l~~~~~~~~~~~~~~g~~y~I~~~-~~vs~~e  164 (366)
                      +...............+.....+++++..++++|++|+++++..+++           .+...++.|+++++ +++|+.|
T Consensus       163 ~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~i~~~Dva~~~~~~l~-----------~~~~~~~~~~~~g~~~~~s~~e  231 (313)
T 1qyd_A          163 YFAGSLAQLDGHMMPPRDKVLIYGDGNVKGIWVDEDDVGTYTIKSID-----------DPQTLNKTMYIRPPMNILSQKE  231 (313)
T ss_dssp             HHTTTSSCTTCCSSCCSSEECCBTTSCSEEEEECHHHHHHHHHHHTT-----------CGGGSSSEEECCCGGGEEEHHH
T ss_pred             ccccccccccccccCCCCeEEEeCCCCceEEEEEHHHHHHHHHHHHh-----------CcccCCceEEEeCCCCccCHHH
Confidence            42211100000000122233456788889999999999999999986           34445778888764 7899999


Q ss_pred             HHHHHHHhcCCCCCccccCHHH
Q 017760          165 FIGPLLKTLDYDLPKSWLAVPH  186 (366)
Q Consensus       165 ~~~~l~~~lg~~~~~~~lp~~~  186 (366)
                      +++.+.+.+|.+.+...+|...
T Consensus       232 ~~~~~~~~~g~~~~~~~~~~~~  253 (313)
T 1qyd_A          232 VIQIWERLSEQNLDKIYISSQD  253 (313)
T ss_dssp             HHHHHHHHHTCCCEECCBCSHH
T ss_pred             HHHHHHHhcCCCCceEECCHHH
Confidence            9999999999987777777544

>1qyc_A Phenylcoumaran benzylic ether reductase PT1; NADPH-dependent aromatic alcohol reductases, pcber, PLR, IFR, lignans, isoflavonoids, plant protein; 2.20A {Pinus taeda} SCOP: c.2.1.2

Probab=99.58  E-value=5.5e-16  Score=144.43  Aligned_cols=164  Identities=12%  Similarity=0.089  Sum_probs=117.8

Q ss_pred             CCeEEEEcCCChhHHHHHHHHHHcCCceEEEEecCCCCc----cc---ccccCCCeEEEEcc------------------
Q 017760           11 GKTFLVTGGLGHVGSALCLELVRRGAYQVRAFDLRTNSP----WS---HLLINHGVHCIQGL------------------   65 (366)
Q Consensus        11 ~~~VlITGgtGfiG~~L~~~L~~~g~~~V~~~dr~~~~~----~~---~~~~~~~v~~i~gD------------------   65 (366)
                      |++|+||||||++|+++++.|+++| ++|++++|+.+..    ..   ..+...+++++++|                  
T Consensus         4 ~~~ilVtGatG~iG~~l~~~L~~~g-~~V~~l~R~~~~~~~~~~~~~~~~l~~~~v~~v~~D~~d~~~l~~~~~~~d~vi   82 (308)
T 1qyc_A            4 RSRILLIGATGYIGRHVAKASLDLG-HPTFLLVRESTASSNSEKAQLLESFKASGANIVHGSIDDHASLVEAVKNVDVVI   82 (308)
T ss_dssp             CCCEEEESTTSTTHHHHHHHHHHTT-CCEEEECCCCCTTTTHHHHHHHHHHHTTTCEEECCCTTCHHHHHHHHHTCSEEE
T ss_pred             CCEEEEEcCCcHHHHHHHHHHHhCC-CCEEEEECCcccccCHHHHHHHHHHHhCCCEEEEeccCCHHHHHHHHcCCCEEE
Confidence            5789999999999999999999999 5899999986432    10   11234678888888                  


Q ss_pred             -------------------ccC-------------------------------------CCCCceEEEEeCCccccCCCC
Q 017760           66 -------------------RKN-------------------------------------NRKCLYTCAVRPAAIYGPGEE   89 (366)
Q Consensus        66 -------------------ks~-------------------------------------~~~~l~~~ilRp~~iyGp~~~   89 (366)
                                         +..                                     +..+++++++||+.++|+...
T Consensus        83 ~~a~~~~~~~~~~l~~aa~~~g~v~~~v~S~~g~~~~~~~~~~p~~~~y~sK~~~e~~~~~~~~~~~~~r~~~~~~~~~~  162 (308)
T 1qyc_A           83 STVGSLQIESQVNIIKAIKEVGTVKRFFPSEFGNDVDNVHAVEPAKSVFEVKAKVRRAIEAEGIPYTYVSSNCFAGYFLR  162 (308)
T ss_dssp             ECCCGGGSGGGHHHHHHHHHHCCCSEEECSCCSSCTTSCCCCTTHHHHHHHHHHHHHHHHHHTCCBEEEECCEEHHHHTT
T ss_pred             ECCcchhhhhHHHHHHHHHhcCCCceEeecccccCccccccCCcchhHHHHHHHHHHHHHhcCCCeEEEEeceecccccc
Confidence                               000                                     001467888888888775322


Q ss_pred             CCHHHHHHHHHcCCCCeeecCCCcceeceeHHHHHHHHHHHHhccccCCCCCCCCCCCCCccEEecCC-CCCCHHHHHHH
Q 017760           90 RHLPRIVSLAKLGLVPFKIGEPSVKTDWIYVDNLVLALILASMGLLDDIPGQKGRPIASGQPYFVSDG-FPINTFEFIGP  168 (366)
Q Consensus        90 ~~l~~~i~~~~~g~~~~~~g~~~~~~~~v~vdDla~a~~~a~~~l~~~~~~~~~~~~~~g~~y~I~~~-~~vs~~e~~~~  168 (366)
                      ...... .....+.....+++++..++++|++|+++++..+++           .+...++.|+++++ +.+|+.|+++.
T Consensus       163 ~~~~~~-~~~~~~~~~~~~~~~~~~~~~i~~~Dva~~~~~~l~-----------~~~~~~~~~~~~g~~~~~s~~e~~~~  230 (308)
T 1qyc_A          163 SLAQAG-LTAPPRDKVVILGDGNARVVFVKEEDIGTFTIKAVD-----------DPRTLNKTLYLRLPANTLSLNELVAL  230 (308)
T ss_dssp             TTTCTT-CSSCCSSEEEEETTSCCEEEEECHHHHHHHHHTTSS-----------CGGGTTEEEECCCGGGEEEHHHHHHH
T ss_pred             cccccc-ccCCCCCceEEecCCCceEEEecHHHHHHHHHHHHh-----------CccccCeEEEEeCCCCccCHHHHHHH
Confidence            111000 001123334567888899999999999999998886           33445788888764 78999999999


Q ss_pred             HHHhcCCCCCccccCHHHH
Q 017760          169 LLKTLDYDLPKSWLAVPHA  187 (366)
Q Consensus       169 l~~~lg~~~~~~~lp~~~~  187 (366)
                      +.+.+|.+.+...+|....
T Consensus       231 ~~~~~g~~~~~~~~~~~~~  249 (308)
T 1qyc_A          231 WEKKIDKTLEKAYVPEEEV  249 (308)
T ss_dssp             HHHHTTSCCEEEEECHHHH
T ss_pred             HHHHhCCCCceEeCCHHHH
Confidence            9999999887777886543

>3ew7_A LMO0794 protein; Q8Y8U8_lismo, putative NAD-dependent epimerase/dehydratase, LMR162, NESG, structural genomics, PSI-2; 2.73A {Listeria monocytogenes}

Probab=99.56  E-value=7e-15  Score=130.01  Aligned_cols=130  Identities=16%  Similarity=0.183  Sum_probs=82.3

Q ss_pred             CeEEEEcCCChhHHHHHHHHHHcCCceEEEEecCCCCcccccccCCCeEEEEcc--------------------------
Q 017760           12 KTFLVTGGLGHVGSALCLELVRRGAYQVRAFDLRTNSPWSHLLINHGVHCIQGL--------------------------   65 (366)
Q Consensus        12 ~~VlITGgtGfiG~~L~~~L~~~g~~~V~~~dr~~~~~~~~~~~~~~v~~i~gD--------------------------   65 (366)
                      |+|+||||||++|+++++.|+++| ++|++++|++...  ..+. ++++++++|                          
T Consensus         1 MkvlVtGatG~iG~~l~~~L~~~g-~~V~~~~R~~~~~--~~~~-~~~~~~~~D~~d~~~~~~~~~d~vi~~ag~~~~~~   76 (221)
T 3ew7_A            1 MKIGIIGATGRAGSRILEEAKNRG-HEVTAIVRNAGKI--TQTH-KDINILQKDIFDLTLSDLSDQNVVVDAYGISPDEA   76 (221)
T ss_dssp             CEEEEETTTSHHHHHHHHHHHHTT-CEEEEEESCSHHH--HHHC-SSSEEEECCGGGCCHHHHTTCSEEEECCCSSTTTT
T ss_pred             CeEEEEcCCchhHHHHHHHHHhCC-CEEEEEEcCchhh--hhcc-CCCeEEeccccChhhhhhcCCCEEEECCcCCcccc
Confidence            579999999999999999999999 5999999985322  1111 455566655                          


Q ss_pred             -------------------------------------------------------c--------cCC-CCCceEEEEeCC
Q 017760           66 -------------------------------------------------------R--------KNN-RKCLYTCAVRPA   81 (366)
Q Consensus        66 -------------------------------------------------------k--------s~~-~~~l~~~ilRp~   81 (366)
                                                                             |        ... ..+++++++||+
T Consensus        77 ~~~~~~~~~l~~a~~~~~~~~~v~~SS~~~~~~~~~~~~~~~~~~~~~~~~y~~~k~~~e~~~~~~~~~~gi~~~ivrp~  156 (221)
T 3ew7_A           77 EKHVTSLDHLISVLNGTVSPRLLVVGGAASLQIDEDGNTLLESKGLREAPYYPTARAQAKQLEHLKSHQAEFSWTYISPS  156 (221)
T ss_dssp             TSHHHHHHHHHHHHCSCCSSEEEEECCCC-------------------CCCSCCHHHHHHHHHHHHTTTTTSCEEEEECS
T ss_pred             chHHHHHHHHHHHHHhcCCceEEEEecceEEEcCCCCccccccCCCCCHHHHHHHHHHHHHHHHHHhhccCccEEEEeCc
Confidence                                                                   0        012 678999999999


Q ss_pred             ccccCCCCCCHHHHHHHHHcCCCCeeecCCCcceeceeHHHHHHHHHHHHhccccCCCCCCCCCCCCCccEEecCCCCCC
Q 017760           82 AIYGPGEERHLPRIVSLAKLGLVPFKIGEPSVKTDWIYVDNLVLALILASMGLLDDIPGQKGRPIASGQPYFVSDGFPIN  161 (366)
Q Consensus        82 ~iyGp~~~~~l~~~i~~~~~g~~~~~~g~~~~~~~~v~vdDla~a~~~a~~~l~~~~~~~~~~~~~~g~~y~I~~~~~vs  161 (366)
                      .+|||+...  ..+   ...+......+++   .+++|++|+|++++.+++           .+...|+.||++++.+.+
T Consensus       157 ~v~g~~~~~--~~~---~~~~~~~~~~~~~---~~~i~~~Dva~~~~~~l~-----------~~~~~g~~~~~~~~~~~~  217 (221)
T 3ew7_A          157 AMFEPGERT--GDY---QIGKDHLLFGSDG---NSFISMEDYAIAVLDEIE-----------RPNHLNEHFTVAGKLEHH  217 (221)
T ss_dssp             SCCCCC-----------------------------CCCHHHHHHHHHHHHH-----------SCSCTTSEEECCC-----
T ss_pred             ceecCCCcc--Cce---EeccccceecCCC---CceEeHHHHHHHHHHHHh-----------CccccCCEEEECCCCccc
Confidence            999995421  111   1112222333333   379999999999999998           566789999999988777


Q ss_pred             HHH
Q 017760          162 TFE  164 (366)
Q Consensus       162 ~~e  164 (366)
                      ..|
T Consensus       218 ~~~  220 (221)
T 3ew7_A          218 HHH  220 (221)
T ss_dssp             ---
T ss_pred             ccc
Confidence            554

>2gas_A Isoflavone reductase; NADPH-dependent reductase, oxidoreductase; 1.60A {Medicago sativa}

Probab=99.56  E-value=2.5e-15  Score=139.87  Aligned_cols=164  Identities=14%  Similarity=0.083  Sum_probs=116.9

Q ss_pred             CCeEEEEcCCChhHHHHHHHHHHcCCceEEEEecCCCCc-----ccc---cccCCCeEEEEcc-----------------
Q 017760           11 GKTFLVTGGLGHVGSALCLELVRRGAYQVRAFDLRTNSP-----WSH---LLINHGVHCIQGL-----------------   65 (366)
Q Consensus        11 ~~~VlITGgtGfiG~~L~~~L~~~g~~~V~~~dr~~~~~-----~~~---~~~~~~v~~i~gD-----------------   65 (366)
                      |++|+||||||++|+++++.|+++| ++|++++|+++..     ...   .+...+++++++|                 
T Consensus         2 ~~~vlVtGatG~iG~~l~~~L~~~g-~~V~~~~R~~~~~~~~~~~~~~~~~l~~~~v~~v~~D~~d~~~l~~~~~~~d~v   80 (307)
T 2gas_A            2 ENKILILGPTGAIGRHIVWASIKAG-NPTYALVRKTITAANPETKEELIDNYQSLGVILLEGDINDHETLVKAIKQVDIV   80 (307)
T ss_dssp             CCCEEEESTTSTTHHHHHHHHHHHT-CCEEEEECCSCCSSCHHHHHHHHHHHHHTTCEEEECCTTCHHHHHHHHTTCSEE
T ss_pred             CcEEEEECCCchHHHHHHHHHHhCC-CcEEEEECCCcccCChHHHHHHHHHHHhCCCEEEEeCCCCHHHHHHHHhCCCEE
Confidence            5789999999999999999999999 5899999986211     000   1123567888888                 


Q ss_pred             ----------------------c-c--------C------C--------------------CCCceEEEEeCCccccCCC
Q 017760           66 ----------------------R-K--------N------N--------------------RKCLYTCAVRPAAIYGPGE   88 (366)
Q Consensus        66 ----------------------k-s--------~------~--------------------~~~l~~~ilRp~~iyGp~~   88 (366)
                                            . .        .      .                    ..+++++++||+.++|+..
T Consensus        81 i~~a~~~~~~~~~~l~~aa~~~g~v~~~v~S~~g~~~~~~~~~~p~~~~y~sK~~~e~~~~~~~i~~~~lrp~~~~~~~~  160 (307)
T 2gas_A           81 ICAAGRLLIEDQVKIIKAIKEAGNVKKFFPSEFGLDVDRHDAVEPVRQVFEEKASIRRVIEAEGVPYTYLCCHAFTGYFL  160 (307)
T ss_dssp             EECSSSSCGGGHHHHHHHHHHHCCCSEEECSCCSSCTTSCCCCTTHHHHHHHHHHHHHHHHHHTCCBEEEECCEETTTTG
T ss_pred             EECCcccccccHHHHHHHHHhcCCceEEeecccccCcccccCCCcchhHHHHHHHHHHHHHHcCCCeEEEEcceeecccc
Confidence                                  0 0        0      0                    0157789999988887632


Q ss_pred             CCCHHHHHHHHHcCCCCeeecCCCcceeceeHHHHHHHHHHHHhccccCCCCCCCCCCCCCccEEecCC-CCCCHHHHHH
Q 017760           89 ERHLPRIVSLAKLGLVPFKIGEPSVKTDWIYVDNLVLALILASMGLLDDIPGQKGRPIASGQPYFVSDG-FPINTFEFIG  167 (366)
Q Consensus        89 ~~~l~~~i~~~~~g~~~~~~g~~~~~~~~v~vdDla~a~~~a~~~l~~~~~~~~~~~~~~g~~y~I~~~-~~vs~~e~~~  167 (366)
                      ..+... ......+.....+++++..++++|++|+|++++.+++           .+...++.|++.++ +.+|+.|+++
T Consensus       161 ~~~~~~-~~~~~~~~~~~~~~~~~~~~~~i~~~Dva~~~~~~l~-----------~~~~~~~~~~~~~~~~~~s~~e~~~  228 (307)
T 2gas_A          161 RNLAQL-DATDPPRDKVVILGDGNVKGAYVTEADVGTFTIRAAN-----------DPNTLNKAVHIRLPKNYLTQNEVIA  228 (307)
T ss_dssp             GGTTCT-TCSSCCSSEEEEETTSCSEEEEECHHHHHHHHHHHHT-----------CGGGTTEEEECCCGGGEEEHHHHHH
T ss_pred             cccccc-ccccCCCCeEEEecCCCcceEEeeHHHHHHHHHHHHc-----------CccccCceEEEeCCCCcCCHHHHHH
Confidence            211100 0001122334567888889999999999999999996           33445788888764 6899999999


Q ss_pred             HHHHhcCCCCCccccCHHHH
Q 017760          168 PLLKTLDYDLPKSWLAVPHA  187 (366)
Q Consensus       168 ~l~~~lg~~~~~~~lp~~~~  187 (366)
                      .+.+.+|.+.+...+|....
T Consensus       229 ~~~~~~g~~~~~~~~~~~~~  248 (307)
T 2gas_A          229 LWEKKIGKTLEKTYVSEEQV  248 (307)
T ss_dssp             HHHHHHTSCCEEEEECHHHH
T ss_pred             HHHHHhCCCCceeecCHHHH
Confidence            99999999887777886543

>3dqp_A Oxidoreductase YLBE; alpha-beta protein., structural genomics, PSI-2, protein structure initiative; 1.40A {Lactococcus lactis subsp}

Probab=99.55  E-value=8.6e-15  Score=129.81  Aligned_cols=125  Identities=15%  Similarity=0.130  Sum_probs=95.9

Q ss_pred             CeEEEEcCCChhHHHHHHHHHHcCCceEEEEecCCCCcccccccCCCeEEEEcc--------------------------
Q 017760           12 KTFLVTGGLGHVGSALCLELVRRGAYQVRAFDLRTNSPWSHLLINHGVHCIQGL--------------------------   65 (366)
Q Consensus        12 ~~VlITGgtGfiG~~L~~~L~~~g~~~V~~~dr~~~~~~~~~~~~~~v~~i~gD--------------------------   65 (366)
                      |+|+||||+|++|+++++.|+++| ++|++++|++.....    ..+++++++|                          
T Consensus         1 M~ilItGatG~iG~~l~~~L~~~g-~~V~~~~R~~~~~~~----~~~~~~~~~D~~d~~~~~~~~~~~~d~vi~~ag~~~   75 (219)
T 3dqp_A            1 MKIFIVGSTGRVGKSLLKSLSTTD-YQIYAGARKVEQVPQ----YNNVKAVHFDVDWTPEEMAKQLHGMDAIINVSGSGG   75 (219)
T ss_dssp             CEEEEESTTSHHHHHHHHHHTTSS-CEEEEEESSGGGSCC----CTTEEEEECCTTSCHHHHHTTTTTCSEEEECCCCTT
T ss_pred             CeEEEECCCCHHHHHHHHHHHHCC-CEEEEEECCccchhh----cCCceEEEecccCCHHHHHHHHcCCCEEEECCcCCC
Confidence            489999999999999999999999 599999998643211    1455555555                          


Q ss_pred             ---------------------------------------c--------------------cC-CCCCceEEEEeCCcccc
Q 017760           66 ---------------------------------------R--------------------KN-NRKCLYTCAVRPAAIYG   85 (366)
Q Consensus        66 ---------------------------------------k--------------------s~-~~~~l~~~ilRp~~iyG   85 (366)
                                                             .                    .. +..+++++++||+.+||
T Consensus        76 ~~~~~~n~~~~~~l~~a~~~~~~~~iv~~SS~~~~~~~~~~e~~~~~~~~Y~~sK~~~e~~~~~~~~i~~~ilrp~~v~g  155 (219)
T 3dqp_A           76 KSLLKVDLYGAVKLMQAAEKAEVKRFILLSTIFSLQPEKWIGAGFDALKDYYIAKHFADLYLTKETNLDYTIIQPGALTE  155 (219)
T ss_dssp             SSCCCCCCHHHHHHHHHHHHTTCCEEEEECCTTTTCGGGCCSHHHHHTHHHHHHHHHHHHHHHHSCCCEEEEEEECSEEC
T ss_pred             CCcEeEeHHHHHHHHHHHHHhCCCEEEEECcccccCCCcccccccccccHHHHHHHHHHHHHHhccCCcEEEEeCceEec
Confidence                                                   0                    01 46689999999999999


Q ss_pred             CCCCCCHHHHHHHHHcCCCCeeecCCCcceeceeHHHHHHHHHHHHhccccCCCCCCCCCCCCCccEEecCCCCCCHHHH
Q 017760           86 PGEERHLPRIVSLAKLGLVPFKIGEPSVKTDWIYVDNLVLALILASMGLLDDIPGQKGRPIASGQPYFVSDGFPINTFEF  165 (366)
Q Consensus        86 p~~~~~l~~~i~~~~~g~~~~~~g~~~~~~~~v~vdDla~a~~~a~~~l~~~~~~~~~~~~~~g~~y~I~~~~~vs~~e~  165 (366)
                      +.....+              ..+  +...++++++|+|++++.+++           .+...|++||+++++ .++.|+
T Consensus       156 ~~~~~~~--------------~~~--~~~~~~i~~~Dva~~i~~~l~-----------~~~~~g~~~~i~~g~-~~~~e~  207 (219)
T 3dqp_A          156 EEATGLI--------------DIN--DEVSASNTIGDVADTIKELVM-----------TDHSIGKVISMHNGK-TAIKEA  207 (219)
T ss_dssp             SCCCSEE--------------EES--SSCCCCEEHHHHHHHHHHHHT-----------CGGGTTEEEEEEECS-EEHHHH
T ss_pred             CCCCCcc--------------ccC--CCcCCcccHHHHHHHHHHHHh-----------CccccCcEEEeCCCC-ccHHHH
Confidence            8654221              122  567899999999999999997           445568999998885 888887


Q ss_pred             HHHH
Q 017760          166 IGPL  169 (366)
Q Consensus       166 ~~~l  169 (366)
                      .+.-
T Consensus       208 ~~~~  211 (219)
T 3dqp_A          208 LESL  211 (219)
T ss_dssp             HHTT
T ss_pred             HHHH
Confidence            7643

>3h2s_A Putative NADH-flavin reductase; Q03B84, NESG, LCR19, structural genomics, PSI-2, protein structure initiative; HET: NDP; 1.78A {Lactobacillus casei atcc 334}

Probab=99.51  E-value=3.1e-14  Score=126.28  Aligned_cols=129  Identities=19%  Similarity=0.155  Sum_probs=90.5

Q ss_pred             CeEEEEcCCChhHHHHHHHHHHcCCceEEEEecCCCCcccccccCCCeEEEEcc--------------------------
Q 017760           12 KTFLVTGGLGHVGSALCLELVRRGAYQVRAFDLRTNSPWSHLLINHGVHCIQGL--------------------------   65 (366)
Q Consensus        12 ~~VlITGgtGfiG~~L~~~L~~~g~~~V~~~dr~~~~~~~~~~~~~~v~~i~gD--------------------------   65 (366)
                      |+|+||||||++|+++++.|+++| ++|++++|++...  ..+..++++++++|                          
T Consensus         1 MkilVtGatG~iG~~l~~~L~~~g-~~V~~~~R~~~~~--~~~~~~~~~~~~~D~~d~~~~~~~~~d~vi~~ag~~~~~~   77 (224)
T 3h2s_A            1 MKIAVLGATGRAGSAIVAEARRRG-HEVLAVVRDPQKA--ADRLGATVATLVKEPLVLTEADLDSVDAVVDALSVPWGSG   77 (224)
T ss_dssp             CEEEEETTTSHHHHHHHHHHHHTT-CEEEEEESCHHHH--HHHTCTTSEEEECCGGGCCHHHHTTCSEEEECCCCCTTSS
T ss_pred             CEEEEEcCCCHHHHHHHHHHHHCC-CEEEEEEeccccc--ccccCCCceEEecccccccHhhcccCCEEEECCccCCCcc
Confidence            479999999999999999999999 5999999975321  12223455556555                          


Q ss_pred             ------------------------------------c------------------------------cCCCCCceEEEEe
Q 017760           66 ------------------------------------R------------------------------KNNRKCLYTCAVR   79 (366)
Q Consensus        66 ------------------------------------k------------------------------s~~~~~l~~~ilR   79 (366)
                                                          .                              ..+..+++++++|
T Consensus        78 ~~~~n~~~~~~l~~a~~~~~~~~v~~SS~~~~~~~~~~~~~~~~~~~~~~~~~~y~~sK~~~e~~~~~~~~~~i~~~ivr  157 (224)
T 3h2s_A           78 RGYLHLDFATHLVSLLRNSDTLAVFILGSASLAMPGADHPMILDFPESAASQPWYDGALYQYYEYQFLQMNANVNWIGIS  157 (224)
T ss_dssp             CTHHHHHHHHHHHHTCTTCCCEEEEECCGGGSBCTTCSSCGGGGCCGGGGGSTTHHHHHHHHHHHHHHTTCTTSCEEEEE
T ss_pred             hhhHHHHHHHHHHHHHHHcCCcEEEEecceeeccCCCCccccccCCCCCccchhhHHHHHHHHHHHHHHhcCCCcEEEEc
Confidence                                                0                              0235689999999


Q ss_pred             CCccccCCCCCCHHHHHHHHHcCCCCeeecCCCcceeceeHHHHHHHHHHHHhccccCCCCCCCCCCCCCccEEecCCCC
Q 017760           80 PAAIYGPGEERHLPRIVSLAKLGLVPFKIGEPSVKTDWIYVDNLVLALILASMGLLDDIPGQKGRPIASGQPYFVSDGFP  159 (366)
Q Consensus        80 p~~iyGp~~~~~l~~~i~~~~~g~~~~~~g~~~~~~~~v~vdDla~a~~~a~~~l~~~~~~~~~~~~~~g~~y~I~~~~~  159 (366)
                      |+.+||+++...       ...+......  +....+++|++|+|++++.+++           .+...|++|++++.++
T Consensus       158 p~~v~g~~~~~~-------~~~~~~~~~~--~~~~~~~i~~~DvA~~~~~~l~-----------~~~~~g~~~~~~~~~~  217 (224)
T 3h2s_A          158 PSEAFPSGPATS-------YVAGKDTLLV--GEDGQSHITTGNMALAILDQLE-----------HPTAIRDRIVVRDADL  217 (224)
T ss_dssp             ECSBCCCCCCCC-------EEEESSBCCC--CTTSCCBCCHHHHHHHHHHHHH-----------SCCCTTSEEEEEECC-
T ss_pred             CccccCCCcccC-------ceeccccccc--CCCCCceEeHHHHHHHHHHHhc-----------CccccCCEEEEecCcc
Confidence            999999965421       0111111111  2345789999999999999998           5667899999998876


Q ss_pred             CCHH
Q 017760          160 INTF  163 (366)
Q Consensus       160 vs~~  163 (366)
                      .+..
T Consensus       218 ~~~~  221 (224)
T 3h2s_A          218 EHHH  221 (224)
T ss_dssp             ----
T ss_pred             hhcc
Confidence            5544

>3ay3_A NAD-dependent epimerase/dehydratase; glucuronic acid dehydrogeanse, oxidoreductase; 2.10A {Chromohalobacter salexigens}

Probab=99.48  E-value=3.4e-14  Score=129.85  Aligned_cols=49  Identities=27%  Similarity=0.189  Sum_probs=38.8

Q ss_pred             CCeEEEEcCCChhHHHHHHHHHHcCCceEEEEecCCCCcccccccCCCeEEEEcc
Q 017760           11 GKTFLVTGGLGHVGSALCLELVRRGAYQVRAFDLRTNSPWSHLLINHGVHCIQGL   65 (366)
Q Consensus        11 ~~~VlITGgtGfiG~~L~~~L~~~g~~~V~~~dr~~~~~~~~~~~~~~v~~i~gD   65 (366)
                      |++|+||||+|++|+++++.|+++| ++|++++|++....     ..+++++.+|
T Consensus         2 ~~~ilVtGatG~iG~~l~~~L~~~g-~~V~~~~r~~~~~~-----~~~~~~~~~D   50 (267)
T 3ay3_A            2 LNRLLVTGAAGGVGSAIRPHLGTLA-HEVRLSDIVDLGAA-----EAHEEIVACD   50 (267)
T ss_dssp             EEEEEEESTTSHHHHHHGGGGGGTE-EEEEECCSSCCCCC-----CTTEEECCCC
T ss_pred             CceEEEECCCCHHHHHHHHHHHhCC-CEEEEEeCCCcccc-----CCCccEEEcc
Confidence            4689999999999999999999999 69999999865321     1345555665

>2a35_A Hypothetical protein PA4017; alpha-beta-alpha sandwich, structura genomics, PSI, protein structure initiative; 1.50A {Pseudomonas aeruginosa} SCOP: c.2.1.2

Probab=99.46  E-value=2.8e-14  Score=125.63  Aligned_cols=127  Identities=18%  Similarity=0.150  Sum_probs=86.0

Q ss_pred             cCCeEEEEcCCChhHHHHHHHHHHcCC-ceEEEEecCCCCcccccccCCCeEEEEcc-----------------------
Q 017760           10 EGKTFLVTGGLGHVGSALCLELVRRGA-YQVRAFDLRTNSPWSHLLINHGVHCIQGL-----------------------   65 (366)
Q Consensus        10 ~~~~VlITGgtGfiG~~L~~~L~~~g~-~~V~~~dr~~~~~~~~~~~~~~v~~i~gD-----------------------   65 (366)
                      ++|+|+||||+|++|+++++.|+++|. ++|++++|++...      .++++++.+|                       
T Consensus         4 ~~~~vlVtGatG~iG~~l~~~l~~~g~~~~V~~~~r~~~~~------~~~~~~~~~D~~~~~~~~~~~~d~vi~~a~~~~   77 (215)
T 2a35_A            4 TPKRVLLAGATGLTGEHLLDRILSEPTLAKVIAPARKALAE------HPRLDNPVGPLAELLPQLDGSIDTAFCCLGTTI   77 (215)
T ss_dssp             CCCEEEEECTTSHHHHHHHHHHHHCTTCCEEECCBSSCCCC------CTTEECCBSCHHHHGGGCCSCCSEEEECCCCCH
T ss_pred             CCceEEEECCCcHHHHHHHHHHHhCCCCCeEEEEeCCCccc------CCCceEEeccccCHHHHHHhhhcEEEECeeecc
Confidence            357899999999999999999999993 2899999986531      0111222222                       


Q ss_pred             --------------------------------------------------------ccCCCCCce-EEEEeCCccccCCC
Q 017760           66 --------------------------------------------------------RKNNRKCLY-TCAVRPAAIYGPGE   88 (366)
Q Consensus        66 --------------------------------------------------------ks~~~~~l~-~~ilRp~~iyGp~~   88 (366)
                                                                              +.....+++ ++++||+.+|||+.
T Consensus        78 ~~~~~~~~~~~~n~~~~~~l~~~~~~~~~~~~v~~Ss~~~~~~~~~~y~~sK~~~e~~~~~~~~~~~~~vrp~~v~g~~~  157 (215)
T 2a35_A           78 KEAGSEEAFRAVDFDLPLAVGKRALEMGARHYLVVSALGADAKSSIFYNRVKGELEQALQEQGWPQLTIARPSLLFGPRE  157 (215)
T ss_dssp             HHHSSHHHHHHHHTHHHHHHHHHHHHTTCCEEEEECCTTCCTTCSSHHHHHHHHHHHHHTTSCCSEEEEEECCSEESTTS
T ss_pred             ccCCCHHHHHHhhHHHHHHHHHHHHHcCCCEEEEECCcccCCCCccHHHHHHHHHHHHHHHcCCCeEEEEeCceeeCCCC
Confidence                                                                    002334788 99999999999986


Q ss_pred             CCCHHHHHHHHHcCCCCeeecCCCcceeceeHHHHHHHHHHHHhccccCCCCCCCCCCCCCccEEecCCCCCCH
Q 017760           89 ERHLPRIVSLAKLGLVPFKIGEPSVKTDWIYVDNLVLALILASMGLLDDIPGQKGRPIASGQPYFVSDGFPINT  162 (366)
Q Consensus        89 ~~~l~~~i~~~~~g~~~~~~g~~~~~~~~v~vdDla~a~~~a~~~l~~~~~~~~~~~~~~g~~y~I~~~~~vs~  162 (366)
                      ...   +...+.. .. ...++  ...+++|++|+|++++.+++           .+  .++.||+++++++++
T Consensus       158 ~~~---~~~~~~~-~~-~~~~~--~~~~~i~~~Dva~~~~~~~~-----------~~--~~~~~~i~~~~~~~~  211 (215)
T 2a35_A          158 EFR---LAEILAA-PI-ARILP--GKYHGIEACDLARALWRLAL-----------EE--GKGVRFVESDELRKL  211 (215)
T ss_dssp             CEE---GGGGTTC-CC-C------CHHHHHHHHHHHHHHHHHHT-----------CC--CSEEEEEEHHHHHHH
T ss_pred             cch---HHHHHHH-hh-hhccC--CCcCcEeHHHHHHHHHHHHh-----------cC--CCCceEEcHHHHHHh
Confidence            521   1111111 11 12233  26799999999999999996           22  278999998776544

>1xq6_A Unknown protein; structural genomics, protein structure initiative, CESG, AT5G02240, NADP, center for eukaryotic structural genomics; HET: NAP; 1.80A {Arabidopsis thaliana} SCOP: c.2.1.2 PDB: 1ybm_A* 2q46_A* 2q4b_A*

Probab=99.44  E-value=4.9e-14  Score=126.91  Aligned_cols=86  Identities=9%  Similarity=-0.014  Sum_probs=62.2

Q ss_pred             CCCceEEEEeCCccccCCCCCCHHHHHHHHHcCCCCeeecCCCcceeceeHHHHHHHHHHHHhccccCCCCCCCCCCCCC
Q 017760           70 RKCLYTCAVRPAAIYGPGEERHLPRIVSLAKLGLVPFKIGEPSVKTDWIYVDNLVLALILASMGLLDDIPGQKGRPIASG  149 (366)
Q Consensus        70 ~~~l~~~ilRp~~iyGp~~~~~l~~~i~~~~~g~~~~~~g~~~~~~~~v~vdDla~a~~~a~~~l~~~~~~~~~~~~~~g  149 (366)
                      ..+++++++||+.+||+.....  .    ...+....+.++   ..+++|++|+|++++.+++           .+...+
T Consensus       164 ~~~i~~~~vrpg~v~~~~~~~~--~----~~~~~~~~~~~~---~~~~~~~~Dva~~~~~~~~-----------~~~~~g  223 (253)
T 1xq6_A          164 DSGTPYTIIRAGGLLDKEGGVR--E----LLVGKDDELLQT---DTKTVPRADVAEVCIQALL-----------FEEAKN  223 (253)
T ss_dssp             TSSSCEEEEEECEEECSCSSSS--C----EEEESTTGGGGS---SCCEEEHHHHHHHHHHHTT-----------CGGGTT
T ss_pred             hCCCceEEEecceeecCCcchh--h----hhccCCcCCcCC---CCcEEcHHHHHHHHHHHHc-----------CccccC
Confidence            3578999999999999975310  0    001111111221   3569999999999999986           344568


Q ss_pred             ccEEecCCC---CCCHHHHHHHHHHhcCC
Q 017760          150 QPYFVSDGF---PINTFEFIGPLLKTLDY  175 (366)
Q Consensus       150 ~~y~I~~~~---~vs~~e~~~~l~~~lg~  175 (366)
                      ++||+++++   ++|+.|+++.+.+.+|.
T Consensus       224 ~~~~i~~~~~~~~~s~~e~~~~~~~~~g~  252 (253)
T 1xq6_A          224 KAFDLGSKPEGTSTPTKDFKALFSQVTSR  252 (253)
T ss_dssp             EEEEEEECCTTTSCCCCCHHHHHHTCCCC
T ss_pred             CEEEecCCCcCCCCCHHHHHHHHHHHhCC
Confidence            899999864   69999999999999885

>3rft_A Uronate dehydrogenase; apoenzyme, rossmann fold, NAD binding, oxidoreductase; 1.90A {Agrobacterium tumefaciens} PDB: 3rfv_A* 3rfx_A*

Probab=99.42  E-value=1.7e-13  Score=125.49  Aligned_cols=151  Identities=15%  Similarity=0.133  Sum_probs=93.9

Q ss_pred             ccCCeEEEEcCCChhHHHHHHHHHHcCCceEEEEecCCCCcccccccCCCeEEEEcc-----------------------
Q 017760            9 IEGKTFLVTGGLGHVGSALCLELVRRGAYQVRAFDLRTNSPWSHLLINHGVHCIQGL-----------------------   65 (366)
Q Consensus         9 ~~~~~VlITGgtGfiG~~L~~~L~~~g~~~V~~~dr~~~~~~~~~~~~~~v~~i~gD-----------------------   65 (366)
                      |+|++|+||||+|+||+++++.|+++| ++|++++|++....     ..+++++.+|                       
T Consensus         1 m~~k~vlVTGasg~IG~~la~~L~~~G-~~V~~~~r~~~~~~-----~~~~~~~~~Dl~d~~~~~~~~~~~D~vi~~Ag~   74 (267)
T 3rft_A            1 MAMKRLLVTGAAGQLGRVMRERLAPMA-EILRLADLSPLDPA-----GPNEECVQCDLADANAVNAMVAGCDGIVHLGGI   74 (267)
T ss_dssp             CCEEEEEEESTTSHHHHHHHHHTGGGE-EEEEEEESSCCCCC-----CTTEEEEECCTTCHHHHHHHHTTCSEEEECCSC
T ss_pred             CCCCEEEEECCCCHHHHHHHHHHHhcC-CEEEEEecCCcccc-----CCCCEEEEcCCCCHHHHHHHHcCCCEEEECCCC
Confidence            346789999999999999999999999 59999999875432     4567788887                       


Q ss_pred             ---------------------ccCCCCCc-eEEEEeCCccccCCC-----------CC-C--------HHHHHHHH--Hc
Q 017760           66 ---------------------RKNNRKCL-YTCAVRPAAIYGPGE-----------ER-H--------LPRIVSLA--KL  101 (366)
Q Consensus        66 ---------------------ks~~~~~l-~~~ilRp~~iyGp~~-----------~~-~--------l~~~i~~~--~~  101 (366)
                                           +.....+. +.+.+=-..+||...           .. .        ...+.+..  +.
T Consensus        75 ~~~~~~~~~~~~N~~g~~~l~~a~~~~~~~~iv~~SS~~~~g~~~~~~~~~e~~~~~~~~~Y~~sK~~~e~~~~~~a~~~  154 (267)
T 3rft_A           75 SVEKPFEQILQGNIIGLYNLYEAARAHGQPRIVFASSNHTIGYYPQTERLGPDVPARPDGLYGVSKCFGENLARMYFDKF  154 (267)
T ss_dssp             CSCCCHHHHHHHHTHHHHHHHHHHHHTTCCEEEEEEEGGGGTTSBTTSCBCTTSCCCCCSHHHHHHHHHHHHHHHHHHHH
T ss_pred             cCcCCHHHHHHHHHHHHHHHHHHHHHcCCCEEEEEcchHHhCCCCCCCCCCCCCCCCCCChHHHHHHHHHHHHHHHHHHh
Confidence                                 00111111 222222223443210           00 0        11122111  12


Q ss_pred             CCCC--e-------eecCCCcceeceeHHHHHHHHHHHHhccccCCCCCCCCCCCCCccEEecCCCCCCHHHHHHHHHHh
Q 017760          102 GLVP--F-------KIGEPSVKTDWIYVDNLVLALILASMGLLDDIPGQKGRPIASGQPYFVSDGFPINTFEFIGPLLKT  172 (366)
Q Consensus       102 g~~~--~-------~~g~~~~~~~~v~vdDla~a~~~a~~~l~~~~~~~~~~~~~~g~~y~I~~~~~vs~~e~~~~l~~~  172 (366)
                      |...  .       .+++++...+|+|++|+++++..+++           .+...+.++++.++++.++.+....  +.
T Consensus       155 g~~~~~vr~~~v~~~~~~~~~~~~~~~~~d~a~~~~~~~~-----------~~~~~~~~~~~~s~~~~~~~~~~~~--~~  221 (267)
T 3rft_A          155 GQETALVRIGSCTPEPNNYRMLSTWFSHDDFVSLIEAVFR-----------APVLGCPVVWGASANDAGWWDNSHL--GF  221 (267)
T ss_dssp             CCCEEEEEECBCSSSCCSTTHHHHBCCHHHHHHHHHHHHH-----------CSCCCSCEEEECCCCTTCCBCCGGG--GG
T ss_pred             CCeEEEEEeecccCCCCCCCceeeEEcHHHHHHHHHHHHh-----------CCCCCceEEEEeCCCCCCcccChhH--HH
Confidence            3221  0       12345667889999999999999997           4445556788888888887776433  67


Q ss_pred             cCCCCC
Q 017760          173 LDYDLP  178 (366)
Q Consensus       173 lg~~~~  178 (366)
                      +|+.++
T Consensus       222 ~g~~p~  227 (267)
T 3rft_A          222 LGWKPK  227 (267)
T ss_dssp             GCCCCC
T ss_pred             CCCCCC
Confidence            787654

>3qvo_A NMRA family protein; structural genomics, PSI-biology, midwest center for structu genomics, MCSG, unknown function; HET: MNB; 2.30A {Shigella flexneri 2A}

Probab=99.37  E-value=2.3e-12  Score=115.53  Aligned_cols=127  Identities=12%  Similarity=0.027  Sum_probs=90.6

Q ss_pred             cccCCeEEEEcCCChhHHHHHHHHHHcCCceEEEEecCCCCcccccccCCCeEEEEcc----------------------
Q 017760            8 GIEGKTFLVTGGLGHVGSALCLELVRRGAYQVRAFDLRTNSPWSHLLINHGVHCIQGL----------------------   65 (366)
Q Consensus         8 ~~~~~~VlITGgtGfiG~~L~~~L~~~g~~~V~~~dr~~~~~~~~~~~~~~v~~i~gD----------------------   65 (366)
                      .|+|++|+||||+|++|+++++.|+++|.++|++++|++...  ......+++++++|                      
T Consensus        20 ~~~mk~vlVtGatG~iG~~l~~~L~~~G~~~V~~~~R~~~~~--~~~~~~~~~~~~~Dl~d~~~~~~~~~~~D~vv~~a~   97 (236)
T 3qvo_A           20 QGHMKNVLILGAGGQIARHVINQLADKQTIKQTLFARQPAKI--HKPYPTNSQIIMGDVLNHAALKQAMQGQDIVYANLT   97 (236)
T ss_dssp             --CCEEEEEETTTSHHHHHHHHHHTTCTTEEEEEEESSGGGS--CSSCCTTEEEEECCTTCHHHHHHHHTTCSEEEEECC
T ss_pred             cCcccEEEEEeCCcHHHHHHHHHHHhCCCceEEEEEcChhhh--cccccCCcEEEEecCCCHHHHHHHhcCCCEEEEcCC
Confidence            455788999999999999999999999933899999986432  23334678888888                      


Q ss_pred             ----------------------------------------------------------ccCCCCCceEEEEeCCccccCC
Q 017760           66 ----------------------------------------------------------RKNNRKCLYTCAVRPAAIYGPG   87 (366)
Q Consensus        66 ----------------------------------------------------------ks~~~~~l~~~ilRp~~iyGp~   87 (366)
                                                                                +.....+++++++||+.++++.
T Consensus        98 ~~~~~~~~~~~~~~~~~~~~~~iV~iSS~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~gi~~~~vrPg~i~~~~  177 (236)
T 3qvo_A           98 GEDLDIQANSVIAAMKACDVKRLIFVLSLGIYDEVPGKFVEWNNAVIGEPLKPFRRAADAIEASGLEYTILRPAWLTDED  177 (236)
T ss_dssp             STTHHHHHHHHHHHHHHTTCCEEEEECCCCC----------------CGGGHHHHHHHHHHHTSCSEEEEEEECEEECCS
T ss_pred             CCchhHHHHHHHHHHHHcCCCEEEEEecceecCCCCcccccchhhcccchHHHHHHHHHHHHHCCCCEEEEeCCcccCCC
Confidence                                                                      0012457899999999999875


Q ss_pred             CCCCHHHHHHHHHcCCCCeeecCCCcceeceeHHHHHHHHHHHHhccccCCCCCCCCCCCCCccEEecCCCC
Q 017760           88 EERHLPRIVSLAKLGLVPFKIGEPSVKTDWIYVDNLVLALILASMGLLDDIPGQKGRPIASGQPYFVSDGFP  159 (366)
Q Consensus        88 ~~~~l~~~i~~~~~g~~~~~~g~~~~~~~~v~vdDla~a~~~a~~~l~~~~~~~~~~~~~~g~~y~I~~~~~  159 (366)
                      ....             .....+......+++.+|+|++++.+++.          .....++.|+++++..
T Consensus       178 ~~~~-------------~~~~~~~~~~~~~i~~~DvA~~i~~ll~~----------~~~~~g~~~~i~~~~~  226 (236)
T 3qvo_A          178 IIDY-------------ELTSRNEPFKGTIVSRKSVAALITDIIDK----------PEKHIGENIGINQPGT  226 (236)
T ss_dssp             CCCC-------------EEECTTSCCSCSEEEHHHHHHHHHHHHHS----------TTTTTTEEEEEECSSC
T ss_pred             Ccce-------------EEeccCCCCCCcEECHHHHHHHHHHHHcC----------cccccCeeEEecCCCC
Confidence            4321             01111111224689999999999999972          2335689999998764

>1hdo_A Biliverdin IX beta reductase; foetal metabolism, HAEM degradation, flavin reductase, diaphorase, green HAEM binding protein; HET: NAP; 1.15A {Homo sapiens} SCOP: c.2.1.2 PDB: 1he2_A* 1he3_A* 1he4_A* 1he5_A*

Probab=99.36  E-value=3.7e-12  Score=111.02  Aligned_cols=52  Identities=19%  Similarity=0.195  Sum_probs=41.1

Q ss_pred             CCeEEEEcCCChhHHHHHHHHHHcCCceEEEEecCCCCcccccccCCCeEEEEcc
Q 017760           11 GKTFLVTGGLGHVGSALCLELVRRGAYQVRAFDLRTNSPWSHLLINHGVHCIQGL   65 (366)
Q Consensus        11 ~~~VlITGgtGfiG~~L~~~L~~~g~~~V~~~dr~~~~~~~~~~~~~~v~~i~gD   65 (366)
                      +|+|+||||+|++|++++++|+++| ++|++++|++....  .....+++++.+|
T Consensus         3 ~~~ilVtGatG~iG~~l~~~l~~~g-~~V~~~~r~~~~~~--~~~~~~~~~~~~D   54 (206)
T 1hdo_A            3 VKKIAIFGATGQTGLTTLAQAVQAG-YEVTVLVRDSSRLP--SEGPRPAHVVVGD   54 (206)
T ss_dssp             CCEEEEESTTSHHHHHHHHHHHHTT-CEEEEEESCGGGSC--SSSCCCSEEEESC
T ss_pred             CCEEEEEcCCcHHHHHHHHHHHHCC-CeEEEEEeChhhcc--cccCCceEEEEec
Confidence            3789999999999999999999999 59999999764321  1123567777777

>2bka_A CC3, TAT-interacting protein TIP30; NADPH, PEG600, transcription; HET: NDP PE8; 1.7A {Homo sapiens} SCOP: c.2.1.2 PDB: 2fmu_A

Probab=99.29  E-value=1e-11  Score=111.37  Aligned_cols=116  Identities=16%  Similarity=0.107  Sum_probs=79.8

Q ss_pred             ccCCeEEEEcCCChhHHHHHHHHHHcCCc--eEEEEecCCCCcccccccCCCeEEEEcc---------------------
Q 017760            9 IEGKTFLVTGGLGHVGSALCLELVRRGAY--QVRAFDLRTNSPWSHLLINHGVHCIQGL---------------------   65 (366)
Q Consensus         9 ~~~~~VlITGgtGfiG~~L~~~L~~~g~~--~V~~~dr~~~~~~~~~~~~~~v~~i~gD---------------------   65 (366)
                      |++++|+||||+|++|+++++.|+++| +  +|++++|++.....  ...++++++.+|                     
T Consensus        16 m~~~~vlVtGasg~iG~~l~~~L~~~G-~~~~V~~~~r~~~~~~~--~~~~~~~~~~~D~~d~~~~~~~~~~~d~vi~~a   92 (242)
T 2bka_A           16 MQNKSVFILGASGETGRVLLKEILEQG-LFSKVTLIGRRKLTFDE--EAYKNVNQEVVDFEKLDDYASAFQGHDVGFCCL   92 (242)
T ss_dssp             HTCCEEEEECTTSHHHHHHHHHHHHHT-CCSEEEEEESSCCCCCS--GGGGGCEEEECCGGGGGGGGGGGSSCSEEEECC
T ss_pred             hcCCeEEEECCCcHHHHHHHHHHHcCC-CCCEEEEEEcCCCCccc--cccCCceEEecCcCCHHHHHHHhcCCCEEEECC
Confidence            456899999999999999999999999 6  89999998654321  112345666666                     


Q ss_pred             ------------------------------------------------------cc-----CCCCCc-eEEEEeCCcccc
Q 017760           66 ------------------------------------------------------RK-----NNRKCL-YTCAVRPAAIYG   85 (366)
Q Consensus        66 ------------------------------------------------------ks-----~~~~~l-~~~ilRp~~iyG   85 (366)
                                                                            |.     .+..++ +++++||+.+||
T Consensus        93 g~~~~~~~~~~~~~~n~~~~~~~~~~~~~~~~~~iv~~SS~~~~~~~~~~Y~~sK~~~e~~~~~~~~~~~~~vrpg~v~~  172 (242)
T 2bka_A           93 GTTRGKAGAEGFVRVDRDYVLKSAELAKAGGCKHFNLLSSKGADKSSNFLYLQVKGEVEAKVEELKFDRYSVFRPGVLLC  172 (242)
T ss_dssp             CCCHHHHHHHHHHHHHTHHHHHHHHHHHHTTCCEEEEECCTTCCTTCSSHHHHHHHHHHHHHHTTCCSEEEEEECCEEEC
T ss_pred             CcccccCCcccceeeeHHHHHHHHHHHHHCCCCEEEEEccCcCCCCCcchHHHHHHHHHHHHHhcCCCCeEEEcCceecC
Confidence                                                                  00     122356 699999999999


Q ss_pred             CCCCCCH-HHHHHHHHcCCCCeeecCCCcceeceeHHHHHHHHHHHHh
Q 017760           86 PGEERHL-PRIVSLAKLGLVPFKIGEPSVKTDWIYVDNLVLALILASM  132 (366)
Q Consensus        86 p~~~~~l-~~~i~~~~~g~~~~~~g~~~~~~~~v~vdDla~a~~~a~~  132 (366)
                      |+..... ..+........+ ...+    ...+++++|+|++++.+++
T Consensus       173 ~~~~~~~~~~~~~~~~~~~~-~~~~----~~~~~~~~dva~~~~~~~~  215 (242)
T 2bka_A          173 DRQESRPGEWLVRKFFGSLP-DSWA----SGHSVPVVTVVRAMLNNVV  215 (242)
T ss_dssp             TTGGGSHHHHHHHHHHCSCC-TTGG----GGTEEEHHHHHHHHHHHHT
T ss_pred             CCCCCcHHHHHHHHhhcccC-cccc----CCcccCHHHHHHHHHHHHh
Confidence            9754322 233333332221 1112    2358999999999999996

>2bgk_A Rhizome secoisolariciresinol dehydrogenase; oxidoreductase; 1.6A {Podophyllum peltatum} SCOP: c.2.1.2 PDB: 2bgl_A* 2bgm_A*

Probab=99.19  E-value=2.3e-11  Score=111.40  Aligned_cols=87  Identities=14%  Similarity=0.091  Sum_probs=61.1

Q ss_pred             CCceEEEEeCCccccCCCCCC---HHHHHHHHHcCCCCeeecCCCcceeceeHHHHHHHHHHHHhccccCCCCCCCCCCC
Q 017760           71 KCLYTCAVRPAAIYGPGEERH---LPRIVSLAKLGLVPFKIGEPSVKTDWIYVDNLVLALILASMGLLDDIPGQKGRPIA  147 (366)
Q Consensus        71 ~~l~~~ilRp~~iyGp~~~~~---l~~~i~~~~~g~~~~~~g~~~~~~~~v~vdDla~a~~~a~~~l~~~~~~~~~~~~~  147 (366)
                      .+++++++||+.++++.....   .+.....+.....       .....+++++|+|++++.++..         .....
T Consensus       188 ~gi~v~~v~Pg~v~t~~~~~~~~~~~~~~~~~~~~~~-------~~~~~~~~~~dva~~~~~l~~~---------~~~~~  251 (278)
T 2bgk_A          188 YGIRVNCVSPYIVASPLLTDVFGVDSSRVEELAHQAA-------NLKGTLLRAEDVADAVAYLAGD---------ESKYV  251 (278)
T ss_dssp             GTEEEEEEEESCCSCCCCTTSSSCCHHHHHHHHHHTC-------SSCSCCCCHHHHHHHHHHHHSG---------GGTTC
T ss_pred             cCcEEEEEEeceecchhhhhhcccchhHHHHhhhccc-------ccccccCCHHHHHHHHHHHcCc---------ccccC
Confidence            478999999999999965432   1233333222111       1224688999999999988852         02345


Q ss_pred             CCccEEecCCCCCCHHHHHHHHHHhc
Q 017760          148 SGQPYFVSDGFPINTFEFIGPLLKTL  173 (366)
Q Consensus       148 ~g~~y~I~~~~~vs~~e~~~~l~~~l  173 (366)
                      .|+.|++.+|..+++.|+++.+.+.+
T Consensus       252 ~G~~~~v~gg~~~~~~e~~~~i~~~~  277 (278)
T 2bgk_A          252 SGLNLVIDGGYTRTNPAFPTALKHGL  277 (278)
T ss_dssp             CSCEEEESTTGGGCCTHHHHHSCSCC
T ss_pred             CCCEEEECCcccccCCccchhhhhhc
Confidence            68999999999999999999886654

>1fmc_A 7 alpha-hydroxysteroid dehydrogenase; short-chain dehydrogenase/reductase, bIle acid catabolism, oxidoreductase; HET: CHO NAD; 1.80A {Escherichia coli} SCOP: c.2.1.2 PDB: 1ahi_A* 1ahh_A*

Probab=99.16  E-value=3.4e-11  Score=108.72  Aligned_cols=143  Identities=17%  Similarity=0.168  Sum_probs=97.0

Q ss_pred             CCccccccccCCeEEEEcCCChhHHHHHHHHHHcCCceEEEEecCCCCccc--ccc--cCCCeEEEEcc-----------
Q 017760            1 MHLSENEGIEGKTFLVTGGLGHVGSALCLELVRRGAYQVRAFDLRTNSPWS--HLL--INHGVHCIQGL-----------   65 (366)
Q Consensus         1 m~~~~~~~~~~~~VlITGgtGfiG~~L~~~L~~~g~~~V~~~dr~~~~~~~--~~~--~~~~v~~i~gD-----------   65 (366)
                      |..++...+++++|+||||+|++|+++++.|+++|+ +|++++|+......  ..+  ...++.++.+|           
T Consensus         1 m~~~~~~~~~~~~vlVtGasggiG~~la~~l~~~G~-~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~D~~~~~~~~~~~   79 (255)
T 1fmc_A            1 MFNSDNLRLDGKCAIITGAGAGIGKEIAITFATAGA-SVVVSDINADAANHVVDEIQQLGGQAFACRCDITSEQELSALA   79 (255)
T ss_dssp             CCCGGGGCCTTCEEEETTTTSHHHHHHHHHHHTTTC-EEEEEESCHHHHHHHHHHHHHTTCCEEEEECCTTCHHHHHHHH
T ss_pred             CCCccCCCCCCCEEEEECCccHHHHHHHHHHHHCCC-EEEEEcCCHHHHHHHHHHHHHhCCceEEEEcCCCCHHHHHHHH
Confidence            555666667789999999999999999999999995 89999987532110  000  12344555555           


Q ss_pred             --------------------------------------------------------------------------------
Q 017760           66 --------------------------------------------------------------------------------   65 (366)
Q Consensus        66 --------------------------------------------------------------------------------   65 (366)
                                                                                                      
T Consensus        80 ~~~~~~~~~~d~vi~~Ag~~~~~~~~~~~~~~~~~~~~N~~~~~~l~~~~~~~~~~~~~~~iv~~sS~~~~~~~~~~~~Y  159 (255)
T 1fmc_A           80 DFAISKLGKVDILVNNAGGGGPKPFDMPMADFRRAYELNVFSFFHLSQLVAPEMEKNGGGVILTITSMAAENKNINMTSY  159 (255)
T ss_dssp             HHHHHHHSSCCEEEECCCCCCCCCTTCCHHHHHHHHHHHTHHHHHHHHHHHHHHHHHTCEEEEEECCGGGTCCCTTCHHH
T ss_pred             HHHHHhcCCCCEEEECCCCCCCCCCCCCHHHHHHHHHHhhHHHHHHHHHHHHHHHhcCCcEEEEEcchhhcCCCCCCccc
Confidence                                                                                            


Q ss_pred             ---c--------c----CCCCCceEEEEeCCccccCCCCC-CHHHHHHHHHcCCCCeeecCCCcceeceeHHHHHHHHHH
Q 017760           66 ---R--------K----NNRKCLYTCAVRPAAIYGPGEER-HLPRIVSLAKLGLVPFKIGEPSVKTDWIYVDNLVLALIL  129 (366)
Q Consensus        66 ---k--------s----~~~~~l~~~ilRp~~iyGp~~~~-~l~~~i~~~~~g~~~~~~g~~~~~~~~v~vdDla~a~~~  129 (366)
                         |        +    ....+++++++||+.++++.... ..+.+......+.+         ...+.+++|+|++++.
T Consensus       160 ~~sK~a~~~~~~~~~~~~~~~~i~v~~v~Pg~v~t~~~~~~~~~~~~~~~~~~~~---------~~~~~~~~dva~~~~~  230 (255)
T 1fmc_A          160 ASSKAAASHLVRNMAFDLGEKNIRVNGIAPGAILTDALKSVITPEIEQKMLQHTP---------IRRLGQPQDIANAALF  230 (255)
T ss_dssp             HHHHHHHHHHHHHHHHHHHTTTEEEEEEEECSBCSHHHHTTCCHHHHHHHHHTCS---------SCSCBCHHHHHHHHHH
T ss_pred             HHHHHHHHHHHHHHHHHhhhcCcEEEEEecccCcchhhhhccChHHHHHHHhcCC---------cccCCCHHHHHHHHHH
Confidence               0        0    12347899999999999885322 23444444444332         1347899999999998


Q ss_pred             HHhccccCCCCCCCCCCCCCccEEecCCCCCCH
Q 017760          130 ASMGLLDDIPGQKGRPIASGQPYFVSDGFPINT  162 (366)
Q Consensus       130 a~~~l~~~~~~~~~~~~~~g~~y~I~~~~~vs~  162 (366)
                      ++..   +      .....|+.|++++|...|+
T Consensus       231 l~~~---~------~~~~~G~~~~v~gg~~~s~  254 (255)
T 1fmc_A          231 LCSP---A------ASWVSGQILTVSGGGVQEL  254 (255)
T ss_dssp             HHSG---G------GTTCCSCEEEESTTSCCCC
T ss_pred             HhCC---c------cccCCCcEEEECCceeccC
Confidence            8852   0      1234688999999987764

>3m1a_A Putative dehydrogenase; short, PSI, MCSG, structural genomics, midwest center for structural genomics, protein structure initiative; 2.00A {Streptomyces avermitilis}

Probab=99.12  E-value=2.4e-11  Score=111.73  Aligned_cols=150  Identities=15%  Similarity=-0.028  Sum_probs=97.6

Q ss_pred             ccCCeEEEEcCCChhHHHHHHHHHHcCCceEEEEecCCCCccc-ccccCCCeEEEEcc----------------------
Q 017760            9 IEGKTFLVTGGLGHVGSALCLELVRRGAYQVRAFDLRTNSPWS-HLLINHGVHCIQGL----------------------   65 (366)
Q Consensus         9 ~~~~~VlITGgtGfiG~~L~~~L~~~g~~~V~~~dr~~~~~~~-~~~~~~~v~~i~gD----------------------   65 (366)
                      +++++++||||+|+||++++++|+++|+ +|++++|+...... ......+++++++|                      
T Consensus         3 ~~~k~vlVTGas~gIG~~~a~~l~~~G~-~V~~~~r~~~~~~~~~~~~~~~~~~~~~Dv~~~~~~~~~~~~~~~~~g~id   81 (281)
T 3m1a_A            3 ESAKVWLVTGASSGFGRAIAEAAVAAGD-TVIGTARRTEALDDLVAAYPDRAEAISLDVTDGERIDVVAADVLARYGRVD   81 (281)
T ss_dssp             -CCCEEEETTTTSHHHHHHHHHHHHTTC-EEEEEESSGGGGHHHHHHCTTTEEEEECCTTCHHHHHHHHHHHHHHHSCCS
T ss_pred             CCCcEEEEECCCChHHHHHHHHHHHCCC-EEEEEeCCHHHHHHHHHhccCCceEEEeeCCCHHHHHHHHHHHHHhCCCCC
Confidence            3568999999999999999999999995 89999997643211 11123467778877                      


Q ss_pred             -------------------------------------------------------------------------c------
Q 017760           66 -------------------------------------------------------------------------R------   66 (366)
Q Consensus        66 -------------------------------------------------------------------------k------   66 (366)
                                                                                               |      
T Consensus        82 ~lv~~Ag~~~~~~~~~~~~~~~~~~~~~N~~g~~~~~~~~~~~~~~~~~~~iv~~sS~~~~~~~~~~~~Y~~sK~a~~~~  161 (281)
T 3m1a_A           82 VLVNNAGRTQVGAFEETTERELRDLFELHVFGPARLTRALLPQMRERGSGSVVNISSFGGQLSFAGFSAYSATKAALEQL  161 (281)
T ss_dssp             EEEECCCCEEECCTTTCCHHHHHHHHHHHTHHHHHHHHHHHHHHHHHTCEEEEEECCGGGTCCCTTCHHHHHHHHHHHHH
T ss_pred             EEEECCCcCCCCChhhCCHHHHHHHHHHHHHHHHHHHHHHHHHHHhcCCCEEEEEcCccccCCCCCchHHHHHHHHHHHH
Confidence                                                                                     0      


Q ss_pred             --c----CCCCCceEEEEeCCccccCCCC-------CCHHHHHHHHHcCCCCeeecCCCcceeceeHHHHHHHHHHHHhc
Q 017760           67 --K----NNRKCLYTCAVRPAAIYGPGEE-------RHLPRIVSLAKLGLVPFKIGEPSVKTDWIYVDNLVLALILASMG  133 (366)
Q Consensus        67 --s----~~~~~l~~~ilRp~~iyGp~~~-------~~l~~~i~~~~~g~~~~~~g~~~~~~~~v~vdDla~a~~~a~~~  133 (366)
                        +    ....+++++++||+.++++...       ...+.+.........   ........++.+++|+|++++.+++ 
T Consensus       162 ~~~la~e~~~~gi~v~~v~Pg~v~t~~~~~~~~~~~~~~~~~~~~~~~~~~---~~~~~~~~~~~~~~dva~a~~~~~~-  237 (281)
T 3m1a_A          162 SEGLADEVAPFGIKVLIVEPGAFRTNLFGKGAAYFSEENPAYAEKVGPTRQ---LVQGSDGSQPGDPAKAAAAIRLALD-  237 (281)
T ss_dssp             HHHHHHHHGGGTEEEEEEEECCBCCTTTCCCCEEECCBCTTTHHHHHHHHH---HHHC-----CBCHHHHHHHHHHHHH-
T ss_pred             HHHHHHHhhccCcEEEEEecCccccccccccccccCCcchhhHHHhHHHHH---HHhhccCCCCCCHHHHHHHHHHHHh-
Confidence              0    2235899999999999877421       111222221111111   1111233568899999999999997 


Q ss_pred             cccCCCCCCCCCCCCCccEEecCCCCCCHHHHHHHHHHhcC
Q 017760          134 LLDDIPGQKGRPIASGQPYFVSDGFPINTFEFIGPLLKTLD  174 (366)
Q Consensus       134 l~~~~~~~~~~~~~~g~~y~I~~~~~vs~~e~~~~l~~~lg  174 (366)
                                . ...+..|+++++......+....+.+.++
T Consensus       238 ----------~-~~~~~~~~l~s~~~~~i~g~~~~i~~~~~  267 (281)
T 3m1a_A          238 ----------T-EKTPLRLALGGDAVDFLTGHLDSVRAELT  267 (281)
T ss_dssp             ----------S-SSCCSEEEESHHHHHHHHHHHHHHHHHHH
T ss_pred             ----------C-CCCCeEEecCchHHHHHHHHHHHHHHHHH
Confidence                      3 23567899998876777777777766654

>3un1_A Probable oxidoreductase; structural genomics, PSI-biology, NEW YORK structural genomi research consortium, nysgrc; 2.45A {Sinorhizobium meliloti}

Probab=99.06  E-value=6.4e-10  Score=101.23  Aligned_cols=124  Identities=18%  Similarity=0.138  Sum_probs=90.5

Q ss_pred             ccCCeEEEEcCCChhHHHHHHHHHHcCCceEEEEecCCCCcccccccCCCeEEEEcc-----------------------
Q 017760            9 IEGKTFLVTGGLGHVGSALCLELVRRGAYQVRAFDLRTNSPWSHLLINHGVHCIQGL-----------------------   65 (366)
Q Consensus         9 ~~~~~VlITGgtGfiG~~L~~~L~~~g~~~V~~~dr~~~~~~~~~~~~~~v~~i~gD-----------------------   65 (366)
                      .++++++||||+|+||+++++.|+++|+ +|++++|+.....     ..++.++++|                       
T Consensus        26 ~~~k~vlVTGas~gIG~aia~~l~~~G~-~V~~~~r~~~~~~-----~~~~~~~~~Dv~d~~~v~~~~~~~~~~~g~iD~   99 (260)
T 3un1_A           26 NQQKVVVITGASQGIGAGLVRAYRDRNY-RVVATSRSIKPSA-----DPDIHTVAGDISKPETADRIVREGIERFGRIDS   99 (260)
T ss_dssp             TTCCEEEESSCSSHHHHHHHHHHHHTTC-EEEEEESSCCCCS-----STTEEEEESCTTSHHHHHHHHHHHHHHHSCCCE
T ss_pred             cCCCEEEEeCCCCHHHHHHHHHHHHCCC-EEEEEeCChhhcc-----cCceEEEEccCCCHHHHHHHHHHHHHHCCCCCE
Confidence            4568899999999999999999999995 8999999864321     2356777777                       


Q ss_pred             --------------------------------------------------------------------------------
Q 017760           66 --------------------------------------------------------------------------------   65 (366)
Q Consensus        66 --------------------------------------------------------------------------------   65 (366)
                                                                                                      
T Consensus       100 lv~nAg~~~~~~~~~~~~~~~~~~~~vN~~g~~~l~~~~~~~m~~~~~g~iv~isS~~~~~~~~~~~~~~Y~~sKaa~~~  179 (260)
T 3un1_A          100 LVNNAGVFLAKPFVEMTQEDYDHNLGVNVAGFFHITQRAAAEMLKQGSGHIVSITTSLVDQPMVGMPSALASLTKGGLNA  179 (260)
T ss_dssp             EEECCCCCCCCCGGGCCHHHHHHHHHHHTHHHHHHHHHHHHHHHHTTCEEEEEECCTTTTSCBTTCCCHHHHHHHHHHHH
T ss_pred             EEECCCCCCCCChhhCCHHHHHHHHHHhhHHHHHHHHHHHHHHHHcCCcEEEEEechhhccCCCCCccHHHHHHHHHHHH
Confidence                                                                                            


Q ss_pred             ------ccCCCCCceEEEEeCCccccCCCCCCHHHHHHHHHcCCCCeeecCCCcceeceeHHHHHHHHHHHHhccccCCC
Q 017760           66 ------RKNNRKCLYTCAVRPAAIYGPGEERHLPRIVSLAKLGLVPFKIGEPSVKTDWIYVDNLVLALILASMGLLDDIP  139 (366)
Q Consensus        66 ------ks~~~~~l~~~ilRp~~iyGp~~~~~l~~~i~~~~~g~~~~~~g~~~~~~~~v~vdDla~a~~~a~~~l~~~~~  139 (366)
                            +.....++++.+++|+.|++|......   ........         ....+.+++|+|++++.+.+       
T Consensus       180 l~~~la~e~~~~gI~vn~v~PG~v~t~~~~~~~---~~~~~~~~---------p~~r~~~~~dva~av~~L~~-------  240 (260)
T 3un1_A          180 VTRSLAMEFSRSGVRVNAVSPGVIKTPMHPAET---HSTLAGLH---------PVGRMGEIRDVVDAVLYLEH-------  240 (260)
T ss_dssp             HHHHHHHHTTTTTEEEEEEEECCBCCTTSCGGG---HHHHHTTS---------TTSSCBCHHHHHHHHHHHHH-------
T ss_pred             HHHHHHHHhCcCCeEEEEEeecCCCCCCCCHHH---HHHHhccC---------CCCCCcCHHHHHHHHHHhcc-------
Confidence                  013445899999999999998654211   11222211         23456789999999998854       


Q ss_pred             CCCCCCCCCCccEEecCCCCCC
Q 017760          140 GQKGRPIASGQPYFVSDGFPIN  161 (366)
Q Consensus       140 ~~~~~~~~~g~~y~I~~~~~vs  161 (366)
                          .....|+.+++.+|...+
T Consensus       241 ----~~~itG~~i~vdGG~~~~  258 (260)
T 3un1_A          241 ----AGFITGEILHVDGGQNAG  258 (260)
T ss_dssp             ----CTTCCSCEEEESTTGGGC
T ss_pred             ----cCCCCCcEEEECCCeecc
Confidence                556789999999886544

>1cyd_A Carbonyl reductase; short-chain dehydrogenase, oxidoreductase; HET: NAP; 1.80A {Mus musculus} SCOP: c.2.1.2

Probab=99.06  E-value=1.5e-10  Score=103.89  Aligned_cols=37  Identities=30%  Similarity=0.297  Sum_probs=33.8

Q ss_pred             ccCCeEEEEcCCChhHHHHHHHHHHcCCceEEEEecCC
Q 017760            9 IEGKTFLVTGGLGHVGSALCLELVRRGAYQVRAFDLRT   46 (366)
Q Consensus         9 ~~~~~VlITGgtGfiG~~L~~~L~~~g~~~V~~~dr~~   46 (366)
                      +++++++||||+|++|++++++|+++|+ +|++++|++
T Consensus         5 ~~~~~vlVTGasggiG~~~a~~l~~~G~-~V~~~~r~~   41 (244)
T 1cyd_A            5 FSGLRALVTGAGKGIGRDTVKALHASGA-KVVAVTRTN   41 (244)
T ss_dssp             CTTCEEEEESTTSHHHHHHHHHHHHTTC-EEEEEESCH
T ss_pred             CCCCEEEEeCCCchHHHHHHHHHHHCCC-EEEEEeCCH
Confidence            5668999999999999999999999995 899999874

>1w6u_A 2,4-dienoyl-COA reductase, mitochondrial precursor; short chain dehydrogenase, beta- oxidation, NADP, oxidoreductase; HET: HXC NAP; 1.75A {Homo sapiens} SCOP: c.2.1.2 PDB: 1w73_A* 1w8d_A*

Probab=99.03  E-value=1.2e-10  Score=108.17  Aligned_cols=148  Identities=17%  Similarity=0.109  Sum_probs=98.1

Q ss_pred             cccCCeEEEEcCCChhHHHHHHHHHHcCCceEEEEecCCCCccc--ccc---cCCCeEEEEcc-----------------
Q 017760            8 GIEGKTFLVTGGLGHVGSALCLELVRRGAYQVRAFDLRTNSPWS--HLL---INHGVHCIQGL-----------------   65 (366)
Q Consensus         8 ~~~~~~VlITGgtGfiG~~L~~~L~~~g~~~V~~~dr~~~~~~~--~~~---~~~~v~~i~gD-----------------   65 (366)
                      .+++++++||||+|++|+++++.|+++|+ +|++++|+......  ..+   ...++.++++|                 
T Consensus        23 ~l~~k~vlITGasggiG~~la~~L~~~G~-~V~~~~r~~~~~~~~~~~l~~~~~~~~~~~~~Dl~~~~~~~~~~~~~~~~  101 (302)
T 1w6u_A           23 SFQGKVAFITGGGTGLGKGMTTLLSSLGA-QCVIASRKMDVLKATAEQISSQTGNKVHAIQCDVRDPDMVQNTVSELIKV  101 (302)
T ss_dssp             TTTTCEEEEETTTSHHHHHHHHHHHHTTC-EEEEEESCHHHHHHHHHHHHHHHSSCEEEEECCTTCHHHHHHHHHHHHHH
T ss_pred             cCCCCEEEEECCCchHHHHHHHHHHHCCC-EEEEEeCCHHHHHHHHHHHHHhcCCceEEEEeCCCCHHHHHHHHHHHHHH
Confidence            35678999999999999999999999995 89999987532110  000   03456677776                 


Q ss_pred             --------------------------------------------------------------------------------
Q 017760           66 --------------------------------------------------------------------------------   65 (366)
Q Consensus        66 --------------------------------------------------------------------------------   65 (366)
                                                                                                      
T Consensus       102 ~g~id~li~~Ag~~~~~~~~~~~~~~~~~~~~~N~~~~~~l~~~~~~~~~~~~~~~~iv~isS~~~~~~~~~~~~Y~~sK  181 (302)
T 1w6u_A          102 AGHPNIVINNAAGNFISPTERLSPNAWKTITDIVLNGTAFVTLEIGKQLIKAQKGAAFLSITTIYAETGSGFVVPSASAK  181 (302)
T ss_dssp             TCSCSEEEECCCCCCCSCGGGCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHTTCCEEEEEECCTHHHHCCTTCHHHHHHH
T ss_pred             cCCCCEEEECCCCCCCCccccCCHHHHHHHHHHHhHHHHHHHHHHHHHHHHhcCCCEEEEEcccccccCCCCcchhHHHH
Confidence                                                                                            


Q ss_pred             -------cc----CCCCCceEEEEeCCccccCCC-CCCHH--HHHHHHHcCCCCeeecCCCcceeceeHHHHHHHHHHHH
Q 017760           66 -------RK----NNRKCLYTCAVRPAAIYGPGE-ERHLP--RIVSLAKLGLVPFKIGEPSVKTDWIYVDNLVLALILAS  131 (366)
Q Consensus        66 -------ks----~~~~~l~~~ilRp~~iyGp~~-~~~l~--~~i~~~~~g~~~~~~g~~~~~~~~v~vdDla~a~~~a~  131 (366)
                             ++    ....+++++++||+.+++++. ....+  .....+..+.+         ...+.+++|+|++++.++
T Consensus       182 ~a~~~~~~~la~~~~~~gi~v~~v~Pg~v~t~~~~~~~~~~~~~~~~~~~~~p---------~~~~~~~~dva~~~~~l~  252 (302)
T 1w6u_A          182 AGVEAMSKSLAAEWGKYGMRFNVIQPGPIKTKGAFSRLDPTGTFEKEMIGRIP---------CGRLGTVEELANLAAFLC  252 (302)
T ss_dssp             HHHHHHHHHHHHHHGGGTEEEEEEEECCBCC------CCTTSHHHHHHHTTCT---------TSSCBCHHHHHHHHHHHT
T ss_pred             HHHHHHHHHHHHHhhhcCcEEEEEeeccCCCcchhhhcccchhhHHHHHhcCC---------cCCCCCHHHHHHHHHHHc
Confidence                   00    123578999999999998842 11111  11122222221         134789999999999887


Q ss_pred             hccccCCCCCCCCCCCCCccEEecCCCCCCHHHHHHHHHHhcC
Q 017760          132 MGLLDDIPGQKGRPIASGQPYFVSDGFPINTFEFIGPLLKTLD  174 (366)
Q Consensus       132 ~~l~~~~~~~~~~~~~~g~~y~I~~~~~vs~~e~~~~l~~~lg  174 (366)
                      ..   +      .....|+.|++.+|..++..|+++.+.+..|
T Consensus       253 ~~---~------~~~~~G~~~~v~gg~~~~~~~~~~~~~~~~g  286 (302)
T 1w6u_A          253 SD---Y------ASWINGAVIKFDGGEEVLISGEFNDLRKVTK  286 (302)
T ss_dssp             SG---G------GTTCCSCEEEESTTHHHHHHSTTGGGGGCCH
T ss_pred             CC---c------ccccCCCEEEECCCeeeccCCccccchhhcc
Confidence            52   0      2234689999999988888888777766655

>3r6d_A NAD-dependent epimerase/dehydratase; structural genomics, PSI-biology, midwest center for structu genomics, MCSG, veillo parvula; HET: MLZ; 1.25A {Veillonella parvula dsm 2008} PDB: 4hng_A 4hnh_A* 3r14_A*

Probab=99.01  E-value=1.2e-09  Score=96.61  Aligned_cols=52  Identities=13%  Similarity=0.164  Sum_probs=40.7

Q ss_pred             CCeEEEEcCCChhHHHHHHHHH-HcCCceEEEEecCCC-Ccccccc--cCCCeEEEEcc
Q 017760           11 GKTFLVTGGLGHVGSALCLELV-RRGAYQVRAFDLRTN-SPWSHLL--INHGVHCIQGL   65 (366)
Q Consensus        11 ~~~VlITGgtGfiG~~L~~~L~-~~g~~~V~~~dr~~~-~~~~~~~--~~~~v~~i~gD   65 (366)
                      |++|+||||+|++|+++++.|+ +.|+ +|++++|++. ..  ..+  ...+++++++|
T Consensus         5 mk~vlVtGasg~iG~~~~~~l~~~~g~-~V~~~~r~~~~~~--~~~~~~~~~~~~~~~D   60 (221)
T 3r6d_A            5 YXYITILGAAGQIAQXLTATLLTYTDM-HITLYGRQLKTRI--PPEIIDHERVTVIEGS   60 (221)
T ss_dssp             CSEEEEESTTSHHHHHHHHHHHHHCCC-EEEEEESSHHHHS--CHHHHTSTTEEEEECC
T ss_pred             EEEEEEEeCCcHHHHHHHHHHHhcCCc-eEEEEecCccccc--hhhccCCCceEEEECC
Confidence            4569999999999999999999 8994 9999999854 22  222  34567777777

>4e6p_A Probable sorbitol dehydrogenase (L-iditol 2-dehyd; NAD(P)-binding, structural genomics, PSI-biology; HET: MSE; 2.10A {Sinorhizobium meliloti} PDB: 1k2w_A

Probab=99.00  E-value=1.3e-10  Score=105.76  Aligned_cols=143  Identities=19%  Similarity=0.166  Sum_probs=93.7

Q ss_pred             cccCCeEEEEcCCChhHHHHHHHHHHcCCceEEEEecCCCCccc-ccccCCCeEEEEcc---------------------
Q 017760            8 GIEGKTFLVTGGLGHVGSALCLELVRRGAYQVRAFDLRTNSPWS-HLLINHGVHCIQGL---------------------   65 (366)
Q Consensus         8 ~~~~~~VlITGgtGfiG~~L~~~L~~~g~~~V~~~dr~~~~~~~-~~~~~~~v~~i~gD---------------------   65 (366)
                      .+++++++||||+|+||+++++.|+++|+ +|++++|+...... .......+.++++|                     
T Consensus         5 ~l~~k~vlVTGas~gIG~~ia~~l~~~G~-~V~~~~r~~~~~~~~~~~~~~~~~~~~~D~~~~~~v~~~~~~~~~~~g~i   83 (259)
T 4e6p_A            5 RLEGKSALITGSARGIGRAFAEAYVREGA-TVAIADIDIERARQAAAEIGPAAYAVQMDVTRQDSIDAAIAATVEHAGGL   83 (259)
T ss_dssp             TTTTCEEEEETCSSHHHHHHHHHHHHTTC-EEEEEESCHHHHHHHHHHHCTTEEEEECCTTCHHHHHHHHHHHHHHSSSC
T ss_pred             cCCCCEEEEECCCcHHHHHHHHHHHHCCC-EEEEEeCCHHHHHHHHHHhCCCceEEEeeCCCHHHHHHHHHHHHHHcCCC
Confidence            35678999999999999999999999995 89999987532211 11113456777777                     


Q ss_pred             ---------------------------------------------------------------------------c----
Q 017760           66 ---------------------------------------------------------------------------R----   66 (366)
Q Consensus        66 ---------------------------------------------------------------------------k----   66 (366)
                                                                                                 |    
T Consensus        84 d~lv~~Ag~~~~~~~~~~~~~~~~~~~~~N~~g~~~~~~~~~~~~~~~~~~g~iv~isS~~~~~~~~~~~~Y~asK~a~~  163 (259)
T 4e6p_A           84 DILVNNAALFDLAPIVEITRESYEKLFAINVAGTLFTLQAAARQMIAQGRGGKIINMASQAGRRGEALVAIYCATKAAVI  163 (259)
T ss_dssp             CEEEECCCCCCCBCGGGCCHHHHHHHHHHHTHHHHHHHHHHHHHHHHHTSCEEEEEECCGGGTSCCTTBHHHHHHHHHHH
T ss_pred             CEEEECCCcCCCCCcccCCHHHHHHHHHHHhHHHHHHHHHHHHHHHhcCCCeEEEEECChhhccCCCCChHHHHHHHHHH
Confidence                                                                                       0    


Q ss_pred             ----c----CCCCCceEEEEeCCccccCCCCCCHHHHHHHHHcC---CCCeeecCCCcceeceeHHHHHHHHHHHHhccc
Q 017760           67 ----K----NNRKCLYTCAVRPAAIYGPGEERHLPRIVSLAKLG---LVPFKIGEPSVKTDWIYVDNLVLALILASMGLL  135 (366)
Q Consensus        67 ----s----~~~~~l~~~ilRp~~iyGp~~~~~l~~~i~~~~~g---~~~~~~g~~~~~~~~v~vdDla~a~~~a~~~l~  135 (366)
                          +    ....++++.+++|+.+++|..... ..........   ......++......+.+++|+|++++.++..  
T Consensus       164 ~~~~~la~e~~~~gi~vn~v~PG~v~t~~~~~~-~~~~~~~~~~~~~~~~~~~~~~~p~~r~~~~~dva~~v~~L~s~--  240 (259)
T 4e6p_A          164 SLTQSAGLDLIKHRINVNAIAPGVVDGEHWDGV-DALFARYENRPRGEKKRLVGEAVPFGRMGTAEDLTGMAIFLASA--  240 (259)
T ss_dssp             HHHHHHHHHHGGGTEEEEEEEECCBCSTTHHHH-HHHHHHHHTCCTTHHHHHHHHHSTTSSCBCTHHHHHHHHHTTSG--
T ss_pred             HHHHHHHHHhhhcCCEEEEEEECCCccchhhhh-hhhhhhhccCChHHHHHHHhccCCCCCCcCHHHHHHHHHHHhCC--
Confidence                0    234579999999999999854321 1112222111   1111122333456789999999998877641  


Q ss_pred             cCCCCCCCCCCCCCccEEecCCCCCC
Q 017760          136 DDIPGQKGRPIASGQPYFVSDGFPIN  161 (366)
Q Consensus       136 ~~~~~~~~~~~~~g~~y~I~~~~~vs  161 (366)
                             ......|+.|++.+|..+|
T Consensus       241 -------~~~~itG~~i~vdgG~~~s  259 (259)
T 4e6p_A          241 -------ESDYIVSQTYNVDGGNWMS  259 (259)
T ss_dssp             -------GGTTCCSCEEEESTTSSCC
T ss_pred             -------ccCCCCCCEEEECcChhcC
Confidence                   1334568999999987654

>2pd6_A Estradiol 17-beta-dehydrogenase 8; short-chain dehydrogenase/reductase, steroid metabolism, LIP metabolism, structural genomics; HET: NAD; 2.00A {Homo sapiens}

Probab=98.96  E-value=1e-09  Score=99.57  Aligned_cols=37  Identities=35%  Similarity=0.472  Sum_probs=33.7

Q ss_pred             ccCCeEEEEcCCChhHHHHHHHHHHcCCceEEEEecCC
Q 017760            9 IEGKTFLVTGGLGHVGSALCLELVRRGAYQVRAFDLRT   46 (366)
Q Consensus         9 ~~~~~VlITGgtGfiG~~L~~~L~~~g~~~V~~~dr~~   46 (366)
                      +++++|+||||+|++|+++++.|+++|+ +|++++|+.
T Consensus         5 ~~~k~vlITGasggiG~~la~~l~~~G~-~V~~~~r~~   41 (264)
T 2pd6_A            5 LRSALALVTGAGSGIGRAVSVRLAGEGA-TVAACDLDR   41 (264)
T ss_dssp             CTTCEEEEETTTSHHHHHHHHHHHHTTC-EEEEEESSH
T ss_pred             cCCCEEEEECCCChHHHHHHHHHHHCCC-EEEEEeCCh
Confidence            4568999999999999999999999995 899999875

>2dkn_A 3-alpha-hydroxysteroid dehydrogenase; oxidoreductase, rossmann fold; HET: NAI; 1.80A {Pseudomonas SP}

Probab=98.95  E-value=1.4e-10  Score=104.36  Aligned_cols=36  Identities=28%  Similarity=0.297  Sum_probs=32.4

Q ss_pred             CCeEEEEcCCChhHHHHHHHHHHcCCceEEEEecCCC
Q 017760           11 GKTFLVTGGLGHVGSALCLELVRRGAYQVRAFDLRTN   47 (366)
Q Consensus        11 ~~~VlITGgtGfiG~~L~~~L~~~g~~~V~~~dr~~~   47 (366)
                      |++|+||||+|++|+++++.|+++| ++|++++|++.
T Consensus         1 Mk~vlVtGasg~iG~~l~~~L~~~g-~~V~~~~r~~~   36 (255)
T 2dkn_A            1 MSVIAITGSASGIGAALKELLARAG-HTVIGIDRGQA   36 (255)
T ss_dssp             -CEEEEETTTSHHHHHHHHHHHHTT-CEEEEEESSSS
T ss_pred             CcEEEEeCCCcHHHHHHHHHHHhCC-CEEEEEeCChh
Confidence            4689999999999999999999999 48999999764

>3d7l_A LIN1944 protein; APC89317, structural genomics, PS protein structure initiative, midwest center for structural genomics, MCSG; 2.06A {Listeria innocua}

Probab=98.94  E-value=1.8e-09  Score=93.87  Aligned_cols=33  Identities=24%  Similarity=0.287  Sum_probs=30.5

Q ss_pred             CeEEEEcCCChhHHHHHHHHHHcCCceEEEEecCC
Q 017760           12 KTFLVTGGLGHVGSALCLELVRRGAYQVRAFDLRT   46 (366)
Q Consensus        12 ~~VlITGgtGfiG~~L~~~L~~~g~~~V~~~dr~~   46 (366)
                      |+++||||+|++|++++++|+ +| ++|++++|++
T Consensus         4 M~vlVtGasg~iG~~~~~~l~-~g-~~V~~~~r~~   36 (202)
T 3d7l_A            4 MKILLIGASGTLGSAVKERLE-KK-AEVITAGRHS   36 (202)
T ss_dssp             CEEEEETTTSHHHHHHHHHHT-TT-SEEEEEESSS
T ss_pred             cEEEEEcCCcHHHHHHHHHHH-CC-CeEEEEecCc
Confidence            589999999999999999999 99 5899999874

>1uay_A Type II 3-hydroxyacyl-COA dehydrogenase; beta oxidation, fatty acid, structural genomi structural genomics/proteomics initiative, RSGI; HET: ADN; 1.40A {Thermus thermophilus} SCOP: c.2.1.2

Probab=98.93  E-value=4.4e-09  Score=93.91  Aligned_cols=72  Identities=7%  Similarity=-0.003  Sum_probs=49.8

Q ss_pred             CCceEEEEeCCccccCCCCCCHHHHHHHHHcCCCCeeecCCCcceeceeHHHHHHHHHHHHhccccCCCCCCCCCCCCCc
Q 017760           71 KCLYTCAVRPAAIYGPGEERHLPRIVSLAKLGLVPFKIGEPSVKTDWIYVDNLVLALILASMGLLDDIPGQKGRPIASGQ  150 (366)
Q Consensus        71 ~~l~~~ilRp~~iyGp~~~~~l~~~i~~~~~g~~~~~~g~~~~~~~~v~vdDla~a~~~a~~~l~~~~~~~~~~~~~~g~  150 (366)
                      .+++++++||+.++++......+.+...+..+.+.        ...+++++|+|++++.++.           .+...|+
T Consensus       169 ~gi~v~~v~Pg~v~t~~~~~~~~~~~~~~~~~~~~--------~~~~~~~~dva~~~~~l~~-----------~~~~~G~  229 (242)
T 1uay_A          169 WGIRVVTVAPGLFDTPLLQGLPEKAKASLAAQVPF--------PPRLGRPEEYAALVLHILE-----------NPMLNGE  229 (242)
T ss_dssp             GTEEEEEEEECSCSSHHHHTSCHHHHHHHHTTCCS--------SCSCCCHHHHHHHHHHHHH-----------CTTCCSC
T ss_pred             cCcEEEEEEeccCcchhhhccchhHHHHHHhhCCC--------cccCCCHHHHHHHHHHHhc-----------CCCCCCc
Confidence            47889999999999885433334444444433221        0347899999999999986           3456789


Q ss_pred             cEEecCCCCCC
Q 017760          151 PYFVSDGFPIN  161 (366)
Q Consensus       151 ~y~I~~~~~vs  161 (366)
                      .|++.+|..++
T Consensus       230 ~~~v~gG~~~~  240 (242)
T 1uay_A          230 VVRLDGALRMA  240 (242)
T ss_dssp             EEEESTTCCCC
T ss_pred             EEEEcCCeecC
Confidence            99999886554

>3d3w_A L-xylulose reductase; uronate cycle, short-chain dehydrogenase/reductase(SDR) superfamily, glucose metabolism, acetylation, carbohydrate metabolism; HET: NAP; 1.87A {Homo sapiens} PDB: 1wnt_A* 1pr9_A*

Probab=98.92  E-value=1.1e-09  Score=98.18  Aligned_cols=37  Identities=30%  Similarity=0.388  Sum_probs=33.7

Q ss_pred             ccCCeEEEEcCCChhHHHHHHHHHHcCCceEEEEecCC
Q 017760            9 IEGKTFLVTGGLGHVGSALCLELVRRGAYQVRAFDLRT   46 (366)
Q Consensus         9 ~~~~~VlITGgtGfiG~~L~~~L~~~g~~~V~~~dr~~   46 (366)
                      +++++|+||||+|++|+++++.|+++|+ +|++++|+.
T Consensus         5 l~~k~vlITGasggiG~~~a~~l~~~G~-~V~~~~r~~   41 (244)
T 3d3w_A            5 LAGRRVLVTGAGKGIGRGTVQALHATGA-RVVAVSRTQ   41 (244)
T ss_dssp             CTTCEEEEESTTSHHHHHHHHHHHHTTC-EEEEEESCH
T ss_pred             cCCcEEEEECCCcHHHHHHHHHHHHCCC-EEEEEeCCH
Confidence            4568999999999999999999999995 899999874

>2pnf_A 3-oxoacyl-[acyl-carrier-protein] reductase; short chain oxidoreductase, rossmann fold, oxidoreductase; HET: 1PE MES; 1.80A {Aquifex aeolicus} PDB: 2p68_A*

Probab=98.91  E-value=2e-09  Score=96.60  Aligned_cols=37  Identities=30%  Similarity=0.405  Sum_probs=33.7

Q ss_pred             ccCCeEEEEcCCChhHHHHHHHHHHcCCceEEEEecCC
Q 017760            9 IEGKTFLVTGGLGHVGSALCLELVRRGAYQVRAFDLRT   46 (366)
Q Consensus         9 ~~~~~VlITGgtGfiG~~L~~~L~~~g~~~V~~~dr~~   46 (366)
                      +++++++||||+|++|++++++|+++|+ +|++++|++
T Consensus         5 ~~~~~vlVtGasggiG~~la~~l~~~G~-~V~~~~r~~   41 (248)
T 2pnf_A            5 LQGKVSLVTGSTRGIGRAIAEKLASAGS-TVIITGTSG   41 (248)
T ss_dssp             CTTCEEEETTCSSHHHHHHHHHHHHTTC-EEEEEESSH
T ss_pred             cCCCEEEEECCCchHHHHHHHHHHHCCC-EEEEEeCCh
Confidence            4568999999999999999999999995 899999875

>1h5q_A NADP-dependent mannitol dehydrogenase; oxidoreductase, mannitol metabolism; HET: NAP; 1.50A {Agaricus bisporus} SCOP: c.2.1.2

Probab=98.91  E-value=2.3e-09  Score=97.18  Aligned_cols=57  Identities=19%  Similarity=0.184  Sum_probs=42.3

Q ss_pred             cccCCeEEEEcCCChhHHHHHHHHHHcCCceEEEEecCCCCccc--ccc---cCCCeEEEEcc
Q 017760            8 GIEGKTFLVTGGLGHVGSALCLELVRRGAYQVRAFDLRTNSPWS--HLL---INHGVHCIQGL   65 (366)
Q Consensus         8 ~~~~~~VlITGgtGfiG~~L~~~L~~~g~~~V~~~dr~~~~~~~--~~~---~~~~v~~i~gD   65 (366)
                      .+++++++||||+|++|++++++|+++| ++|++++|+......  ..+   ...++.++++|
T Consensus        11 ~~~~k~vlITGasggiG~~~a~~l~~~G-~~V~~~~r~~~~~~~~~~~l~~~~~~~~~~~~~D   72 (265)
T 1h5q_A           11 SFVNKTIIVTGGNRGIGLAFTRAVAAAG-ANVAVIYRSAADAVEVTEKVGKEFGVKTKAYQCD   72 (265)
T ss_dssp             CCTTEEEEEETTTSHHHHHHHHHHHHTT-EEEEEEESSCTTHHHHHHHHHHHHTCCEEEEECC
T ss_pred             ccCCCEEEEECCCchHHHHHHHHHHHCC-CeEEEEeCcchhhHHHHHHHHHhcCCeeEEEEee
Confidence            4567899999999999999999999999 589999997543211  011   13456667777

>2wsb_A Galactitol dehydrogenase; oxidoreductase, SDR, rossmann fold, tagatose; HET: NAD; 1.25A {Rhodobacter sphaeroides} PDB: 2wdz_A* 3lqf_A*

Probab=98.90  E-value=1.4e-09  Score=98.09  Aligned_cols=45  Identities=22%  Similarity=0.348  Sum_probs=38.3

Q ss_pred             CCccccccccCCeEEEEcCCChhHHHHHHHHHHcCCceEEEEecCC
Q 017760            1 MHLSENEGIEGKTFLVTGGLGHVGSALCLELVRRGAYQVRAFDLRT   46 (366)
Q Consensus         1 m~~~~~~~~~~~~VlITGgtGfiG~~L~~~L~~~g~~~V~~~dr~~   46 (366)
                      |.....+.+++++++||||+|++|++++++|+++|+ +|++++|++
T Consensus         1 m~~~~~~~~~~k~vlITGasggiG~~la~~l~~~G~-~V~~~~r~~   45 (254)
T 2wsb_A            1 MDYRTVFRLDGACAAVTGAGSGIGLEICRAFAASGA-RLILIDREA   45 (254)
T ss_dssp             CCTTTTTCCTTCEEEEETTTSHHHHHHHHHHHHTTC-EEEEEESCH
T ss_pred             CCcccccCCCCCEEEEECCCcHHHHHHHHHHHHCCC-EEEEEeCCH
Confidence            455544456778999999999999999999999995 899999875

>3lyl_A 3-oxoacyl-(acyl-carrier-protein) reductase; alpha and beta protein, NAD(P)-binding rossmann fold, csgid, oxidoreductase; 1.95A {Francisella tularensis subsp} SCOP: c.2.1.2

Probab=98.89  E-value=6.1e-09  Score=93.62  Aligned_cols=133  Identities=15%  Similarity=0.122  Sum_probs=93.8

Q ss_pred             ccCCeEEEEcCCChhHHHHHHHHHHcCCceEEEEecCCCCccc--ccc--cCCCeEEEEcc-------------------
Q 017760            9 IEGKTFLVTGGLGHVGSALCLELVRRGAYQVRAFDLRTNSPWS--HLL--INHGVHCIQGL-------------------   65 (366)
Q Consensus         9 ~~~~~VlITGgtGfiG~~L~~~L~~~g~~~V~~~dr~~~~~~~--~~~--~~~~v~~i~gD-------------------   65 (366)
                      +++++++||||+|++|++++++|+++|+ +|++++|+......  ..+  ...++.++++|                   
T Consensus         3 l~~k~vlITGas~gIG~~~a~~l~~~G~-~v~~~~r~~~~~~~~~~~~~~~~~~~~~~~~D~~~~~~~~~~~~~~~~~~~   81 (247)
T 3lyl_A            3 LNEKVALVTGASRGIGFEVAHALASKGA-TVVGTATSQASAEKFENSMKEKGFKARGLVLNISDIESIQNFFAEIKAENL   81 (247)
T ss_dssp             TTTCEEEESSCSSHHHHHHHHHHHHTTC-EEEEEESSHHHHHHHHHHHHHTTCCEEEEECCTTCHHHHHHHHHHHHHTTC
T ss_pred             CCCCEEEEECCCChHHHHHHHHHHHCCC-EEEEEeCCHHHHHHHHHHHHhcCCceEEEEecCCCHHHHHHHHHHHHHHcC
Confidence            4578999999999999999999999995 89999987532211  011  13467777777                   


Q ss_pred             ----------------------------------------------------------------------------c---
Q 017760           66 ----------------------------------------------------------------------------R---   66 (366)
Q Consensus        66 ----------------------------------------------------------------------------k---   66 (366)
                                                                                                  |   
T Consensus        82 ~id~li~~Ag~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~~~~~g~iv~isS~~~~~~~~~~~~Y~~sK~a~  161 (247)
T 3lyl_A           82 AIDILVNNAGITRDNLMMRMSEDEWQSVINTNLSSIFRMSKECVRGMMKKRWGRIISIGSVVGSAGNPGQTNYCAAKAGV  161 (247)
T ss_dssp             CCSEEEECCCCCCCCCGGGCCHHHHHHHHHHHTHHHHHHHHHHHHHHHHHTCEEEEEECCTHHHHCCTTCHHHHHHHHHH
T ss_pred             CCCEEEECCCCCCCCchhhCCHHHHHHHHHHHhHHHHHHHHHHHHHHHHcCCeEEEEEcchhhccCCCCcHHHHHHHHHH
Confidence                                                                                        0   


Q ss_pred             -----c----CCCCCceEEEEeCCccccCCCCCCHHHHHHHHHcCCCCeeecCCCcceeceeHHHHHHHHHHHHhccccC
Q 017760           67 -----K----NNRKCLYTCAVRPAAIYGPGEERHLPRIVSLAKLGLVPFKIGEPSVKTDWIYVDNLVLALILASMGLLDD  137 (366)
Q Consensus        67 -----s----~~~~~l~~~ilRp~~iyGp~~~~~l~~~i~~~~~g~~~~~~g~~~~~~~~v~vdDla~a~~~a~~~l~~~  137 (366)
                           +    ....++++.+++|+.+..+......+........+.         ....+.+.+|+|+++..++..    
T Consensus       162 ~~~~~~la~e~~~~gi~v~~v~PG~v~t~~~~~~~~~~~~~~~~~~---------~~~~~~~~~dva~~i~~l~s~----  228 (247)
T 3lyl_A          162 IGFSKSLAYEVASRNITVNVVAPGFIATDMTDKLTDEQKSFIATKI---------PSGQIGEPKDIAAAVAFLASE----  228 (247)
T ss_dssp             HHHHHHHHHHHGGGTEEEEEEEECSBCCTTTTTSCHHHHHHHHTTS---------TTCCCBCHHHHHHHHHHHHSG----
T ss_pred             HHHHHHHHHHHHHcCeEEEEEeeCcEecccchhccHHHHHHHhhcC---------CCCCCcCHHHHHHHHHHHhCC----
Confidence                 0    234579999999999998866554444444333322         224678999999999888742    


Q ss_pred             CCCCCCCCCCCCccEEecCCCCC
Q 017760          138 IPGQKGRPIASGQPYFVSDGFPI  160 (366)
Q Consensus       138 ~~~~~~~~~~~g~~y~I~~~~~v  160 (366)
                           ......|+.+++.+|..+
T Consensus       229 -----~~~~~tG~~i~vdgG~~~  246 (247)
T 3lyl_A          229 -----EAKYITGQTLHVNGGMYM  246 (247)
T ss_dssp             -----GGTTCCSCEEEESTTSSC
T ss_pred             -----CcCCccCCEEEECCCEec
Confidence                 133457999999888654

>3awd_A GOX2181, putative polyol dehydrogenase; oxidoreductase; 1.80A {Gluconobacter oxydans}

Probab=98.89  E-value=4e-09  Score=95.37  Aligned_cols=37  Identities=32%  Similarity=0.496  Sum_probs=33.8

Q ss_pred             ccCCeEEEEcCCChhHHHHHHHHHHcCCceEEEEecCC
Q 017760            9 IEGKTFLVTGGLGHVGSALCLELVRRGAYQVRAFDLRT   46 (366)
Q Consensus         9 ~~~~~VlITGgtGfiG~~L~~~L~~~g~~~V~~~dr~~   46 (366)
                      +++++|+||||+|++|++++++|+++|+ +|++++|+.
T Consensus        11 l~~k~vlItGasggiG~~la~~l~~~G~-~V~~~~r~~   47 (260)
T 3awd_A           11 LDNRVAIVTGGAQNIGLACVTALAEAGA-RVIIADLDE   47 (260)
T ss_dssp             CTTCEEEEETTTSHHHHHHHHHHHHTTC-EEEEEESCH
T ss_pred             CCCCEEEEeCCCchHHHHHHHHHHHCCC-EEEEEeCCH
Confidence            4578999999999999999999999995 899999875

>3afn_B Carbonyl reductase; alpha/beta/alpha, rossmann-fold, oxidoreductase; HET: NAP; 1.63A {Sphingomonas SP} PDB: 3afm_A*

Probab=98.89  E-value=3.4e-09  Score=95.59  Aligned_cols=36  Identities=31%  Similarity=0.449  Sum_probs=33.4

Q ss_pred             ccCCeEEEEcCCChhHHHHHHHHHHcCCceEEEEecC
Q 017760            9 IEGKTFLVTGGLGHVGSALCLELVRRGAYQVRAFDLR   45 (366)
Q Consensus         9 ~~~~~VlITGgtGfiG~~L~~~L~~~g~~~V~~~dr~   45 (366)
                      +++++++||||+|++|++++++|+++|+ +|++++|+
T Consensus         5 l~~k~vlVTGasggiG~~~a~~l~~~G~-~V~~~~r~   40 (258)
T 3afn_B            5 LKGKRVLITGSSQGIGLATARLFARAGA-KVGLHGRK   40 (258)
T ss_dssp             GTTCEEEETTCSSHHHHHHHHHHHHTTC-EEEEEESS
T ss_pred             CCCCEEEEeCCCChHHHHHHHHHHHCCC-EEEEECCC
Confidence            4668999999999999999999999995 89999998

>3svt_A Short-chain type dehydrogenase/reductase; ssgcid, seattle structural genomics center for infectious DI oxidoreductase; 2.00A {Mycobacterium ulcerans}

Probab=98.88  E-value=9.2e-10  Score=101.21  Aligned_cols=150  Identities=17%  Similarity=0.131  Sum_probs=103.3

Q ss_pred             cccCCeEEEEcCCChhHHHHHHHHHHcCCceEEEEecCCCCccc--cccc-----CCCeEEEEcc---------------
Q 017760            8 GIEGKTFLVTGGLGHVGSALCLELVRRGAYQVRAFDLRTNSPWS--HLLI-----NHGVHCIQGL---------------   65 (366)
Q Consensus         8 ~~~~~~VlITGgtGfiG~~L~~~L~~~g~~~V~~~dr~~~~~~~--~~~~-----~~~v~~i~gD---------------   65 (366)
                      .+++++++||||+|+||+++++.|++.|+ +|++++|+......  ..+.     ...+.++++|               
T Consensus         8 ~l~~k~vlVTGas~gIG~aia~~l~~~G~-~V~~~~r~~~~~~~~~~~l~~~~~~~~~~~~~~~Dv~~~~~v~~~~~~~~   86 (281)
T 3svt_A            8 SFQDRTYLVTGGGSGIGKGVAAGLVAAGA-SVMIVGRNPDKLAGAVQELEALGANGGAIRYEPTDITNEDETARAVDAVT   86 (281)
T ss_dssp             CCTTCEEEEETTTSHHHHHHHHHHHHTTC-EEEEEESCHHHHHHHHHHHHTTCCSSCEEEEEECCTTSHHHHHHHHHHHH
T ss_pred             CcCCCEEEEeCCCcHHHHHHHHHHHHCCC-EEEEEeCCHHHHHHHHHHHHHhCCCCceEEEEeCCCCCHHHHHHHHHHHH
Confidence            35678999999999999999999999995 89999987532111  1111     1257777888               


Q ss_pred             --------------------------------------------------------------------------------
Q 017760           66 --------------------------------------------------------------------------------   65 (366)
Q Consensus        66 --------------------------------------------------------------------------------   65 (366)
                                                                                                      
T Consensus        87 ~~~g~id~lv~nAg~~~~~~~~~~~~~~~~~~~~~vN~~g~~~~~~~~~~~~~~~~~g~iv~isS~~~~~~~~~~~~Y~a  166 (281)
T 3svt_A           87 AWHGRLHGVVHCAGGSENIGPITQVDSEAWRRTVDLNVNGTMYVLKHAAREMVRGGGGSFVGISSIAASNTHRWFGAYGV  166 (281)
T ss_dssp             HHHSCCCEEEECCCCCCCCCCGGGCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHTTCEEEEEECCHHHHSCCTTCTHHHH
T ss_pred             HHcCCCCEEEECCCcCCCCCCcccCCHHHHHHHHHHhhHHHHHHHHHHHHHHHhcCCcEEEEEeCHHHcCCCCCChhHHH
Confidence                                                                                            


Q ss_pred             -c--------c----CCCCCceEEEEeCCccccCCCCCC--HHHHHHHHHcCCCCeeecCCCcceeceeHHHHHHHHHHH
Q 017760           66 -R--------K----NNRKCLYTCAVRPAAIYGPGEERH--LPRIVSLAKLGLVPFKIGEPSVKTDWIYVDNLVLALILA  130 (366)
Q Consensus        66 -k--------s----~~~~~l~~~ilRp~~iyGp~~~~~--l~~~i~~~~~g~~~~~~g~~~~~~~~v~vdDla~a~~~a  130 (366)
                       |        +    ....++++.+++|+.|+++.....  .+........+.+         ...+.+++|+|++++.+
T Consensus       167 sK~a~~~l~~~la~e~~~~gi~vn~v~PG~v~t~~~~~~~~~~~~~~~~~~~~p---------~~r~~~~~dva~~~~~l  237 (281)
T 3svt_A          167 TKSAVDHLMQLAADELGASWVRVNSIRPGLIRTDLVAAITESAELSSDYAMCTP---------LPRQGEVEDVANMAMFL  237 (281)
T ss_dssp             HHHHHHHHHHHHHHHHGGGTEEEEEEEECSBCSGGGHHHHTCHHHHHHHHHHCS---------SSSCBCHHHHHHHHHHH
T ss_pred             HHHHHHHHHHHHHHHhhhcCeEEEEEEeCcCcCcchhhcccCHHHHHHHHhcCC---------CCCCCCHHHHHHHHHHH
Confidence             0        0    234568999999999988753211  1122222222221         23466899999999888


Q ss_pred             HhccccCCCCCCCCCCCCCccEEecCCCCCC-HHHHHHHHHHhcCCC
Q 017760          131 SMGLLDDIPGQKGRPIASGQPYFVSDGFPIN-TFEFIGPLLKTLDYD  176 (366)
Q Consensus       131 ~~~l~~~~~~~~~~~~~~g~~y~I~~~~~vs-~~e~~~~l~~~lg~~  176 (366)
                      +..         ......|+.+++.+|...+ ..|+.+.+.+.+|.+
T Consensus       238 ~s~---------~~~~itG~~~~vdgG~~~~~~~~~~~~~~~~~~~~  275 (281)
T 3svt_A          238 LSD---------AASFVTGQVINVDGGQMLRRGPDFSAMLEPVFGRD  275 (281)
T ss_dssp             HSG---------GGTTCCSCEEEESTTGGGSCCCCCHHHHHHHHCTT
T ss_pred             hCc---------ccCCCCCCEEEeCCChhcccCCcchhccccccCCc
Confidence            752         0234579999999998776 778888888888865

>3osu_A 3-oxoacyl-[acyl-carrier-protein] reductase; structural genomics, csgid, center for structural genomics O infectious diseases; 1.90A {Staphylococcus aureus subsp} SCOP: c.2.1.0 PDB: 3sj7_A*

Probab=98.88  E-value=6.5e-09  Score=93.61  Aligned_cols=131  Identities=15%  Similarity=0.132  Sum_probs=93.6

Q ss_pred             ccCCeEEEEcCCChhHHHHHHHHHHcCCceEEEEecCCCCccc---ccc--cCCCeEEEEcc------------------
Q 017760            9 IEGKTFLVTGGLGHVGSALCLELVRRGAYQVRAFDLRTNSPWS---HLL--INHGVHCIQGL------------------   65 (366)
Q Consensus         9 ~~~~~VlITGgtGfiG~~L~~~L~~~g~~~V~~~dr~~~~~~~---~~~--~~~~v~~i~gD------------------   65 (366)
                      +++++++||||+|+||+++++.|+++|+ +|++.+++......   ..+  ...++.++++|                  
T Consensus         2 l~~k~~lVTGas~gIG~~ia~~l~~~G~-~V~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~Dv~d~~~v~~~~~~~~~~~   80 (246)
T 3osu_A            2 KMTKSALVTGASRGIGRSIALQLAEEGY-NVAVNYAGSKEKAEAVVEEIKAKGVDSFAIQANVADADEVKAMIKEVVSQF   80 (246)
T ss_dssp             CCSCEEEETTCSSHHHHHHHHHHHHTTC-EEEEEESSCHHHHHHHHHHHHHTTSCEEEEECCTTCHHHHHHHHHHHHHHH
T ss_pred             CCCCEEEEECCCChHHHHHHHHHHHCCC-EEEEEeCCCHHHHHHHHHHHHhcCCcEEEEEccCCCHHHHHHHHHHHHHHc
Confidence            4568899999999999999999999995 89998886532111   011  13456777777                  


Q ss_pred             -----------------------------------------------------------------------------c--
Q 017760           66 -----------------------------------------------------------------------------R--   66 (366)
Q Consensus        66 -----------------------------------------------------------------------------k--   66 (366)
                                                                                                   |  
T Consensus        81 g~id~lv~nAg~~~~~~~~~~~~~~~~~~~~vN~~g~~~~~~~~~~~~~~~~~g~iv~isS~~~~~~~~~~~~Y~~sK~a  160 (246)
T 3osu_A           81 GSLDVLVNNAGITRDNLLMRMKEQEWDDVIDTNLKGVFNCIQKATPQMLRQRSGAIINLSSVVGAVGNPGQANYVATKAG  160 (246)
T ss_dssp             SCCCEEEECCCCCCCCCTTTCCHHHHHHHHHHHTHHHHHHHHHHHHHHHHHTCEEEEEECCHHHHHCCTTCHHHHHHHHH
T ss_pred             CCCCEEEECCCCCCCCCcccCCHHHHHHHHHHhhHHHHHHHHHHHHHHHHcCCCEEEEEcchhhcCCCCCChHHHHHHHH
Confidence                                                                                         1  


Q ss_pred             ------c----CCCCCceEEEEeCCccccCCCCCCHHHHHHHHHcCCCCeeecCCCcceeceeHHHHHHHHHHHHhcccc
Q 017760           67 ------K----NNRKCLYTCAVRPAAIYGPGEERHLPRIVSLAKLGLVPFKIGEPSVKTDWIYVDNLVLALILASMGLLD  136 (366)
Q Consensus        67 ------s----~~~~~l~~~ilRp~~iyGp~~~~~l~~~i~~~~~g~~~~~~g~~~~~~~~v~vdDla~a~~~a~~~l~~  136 (366)
                            +    ....++++.+++|+.++++......+.....+..+.+.         ..+.+.+|+++++..++..   
T Consensus       161 ~~~~~~~la~e~~~~gi~vn~v~PG~v~t~~~~~~~~~~~~~~~~~~p~---------~r~~~~~dva~~v~~l~s~---  228 (246)
T 3osu_A          161 VIGLTKSAARELASRGITVNAVAPGFIVSDMTDALSDELKEQMLTQIPL---------ARFGQDTDIANTVAFLASD---  228 (246)
T ss_dssp             HHHHHHHHHHHHGGGTEEEEEEEECSBGGGCCSCSCHHHHHHHHTTCTT---------CSCBCHHHHHHHHHHHTSG---
T ss_pred             HHHHHHHHHHHhcccCeEEEEEEECCCcCCcccccCHHHHHHHHhcCCC---------CCCcCHHHHHHHHHHHhCc---
Confidence                  0    22458999999999999997766666666655554432         3466789999999888742   


Q ss_pred             CCCCCCCCCCCCCccEEecCCC
Q 017760          137 DIPGQKGRPIASGQPYFVSDGF  158 (366)
Q Consensus       137 ~~~~~~~~~~~~g~~y~I~~~~  158 (366)
                            ......|+.+++.+|.
T Consensus       229 ------~~~~itG~~i~vdgG~  244 (246)
T 3osu_A          229 ------KAKYITGQTIHVNGGM  244 (246)
T ss_dssp             ------GGTTCCSCEEEESTTS
T ss_pred             ------cccCCCCCEEEeCCCc
Confidence                  1234568999998875

>3ai3_A NADPH-sorbose reductase; rossmann-fold, NADPH-dependent reductase, short chain dehydrogenase/reductase, oxidoreductase; HET: NAP SOL SOE; 1.80A {Gluconobacter frateurii} PDB: 3ai2_A* 3ai1_A*

Probab=98.88  E-value=1.7e-09  Score=98.30  Aligned_cols=56  Identities=20%  Similarity=0.229  Sum_probs=41.4

Q ss_pred             ccCCeEEEEcCCChhHHHHHHHHHHcCCceEEEEecCCCCccc--cccc---CCCeEEEEcc
Q 017760            9 IEGKTFLVTGGLGHVGSALCLELVRRGAYQVRAFDLRTNSPWS--HLLI---NHGVHCIQGL   65 (366)
Q Consensus         9 ~~~~~VlITGgtGfiG~~L~~~L~~~g~~~V~~~dr~~~~~~~--~~~~---~~~v~~i~gD   65 (366)
                      +++++++||||+|++|+++++.|+++|+ +|++++|+......  ..+.   ..++.++++|
T Consensus         5 l~~k~vlVTGas~gIG~~ia~~l~~~G~-~V~~~~r~~~~~~~~~~~l~~~~~~~~~~~~~D   65 (263)
T 3ai3_A            5 ISGKVAVITGSSSGIGLAIAEGFAKEGA-HIVLVARQVDRLHEAARSLKEKFGVRVLEVAVD   65 (263)
T ss_dssp             CTTCEEEEESCSSHHHHHHHHHHHHTTC-EEEEEESCHHHHHHHHHHHHHHHCCCEEEEECC
T ss_pred             CCCCEEEEECCCchHHHHHHHHHHHCCC-EEEEEcCCHHHHHHHHHHHHHhcCCceEEEEcC
Confidence            4568999999999999999999999995 89999987532110  0010   3456677777

>3tpc_A Short chain alcohol dehydrogenase-related dehydro; structural genomics, PSI-biology, NEW YORK structural genomi research consortium; 2.34A {Sinorhizobium meliloti}

Probab=98.87  E-value=1.6e-08  Score=91.51  Aligned_cols=56  Identities=23%  Similarity=0.338  Sum_probs=39.7

Q ss_pred             ccCCeEEEEcCCChhHHHHHHHHHHcCCceEEEEecCCCCccc-ccccCCCeEEEEcc
Q 017760            9 IEGKTFLVTGGLGHVGSALCLELVRRGAYQVRAFDLRTNSPWS-HLLINHGVHCIQGL   65 (366)
Q Consensus         9 ~~~~~VlITGgtGfiG~~L~~~L~~~g~~~V~~~dr~~~~~~~-~~~~~~~v~~i~gD   65 (366)
                      +++++++||||+|.||+++++.|.+.|+ +|++++|+...... .......+.++++|
T Consensus         5 l~~k~~lVTGas~gIG~aia~~l~~~G~-~V~~~~r~~~~~~~~~~~~~~~~~~~~~D   61 (257)
T 3tpc_A            5 LKSRVFIVTGASSGLGAAVTRMLAQEGA-TVLGLDLKPPAGEEPAAELGAAVRFRNAD   61 (257)
T ss_dssp             CTTCEEEEESTTSHHHHHHHHHHHHTTC-EEEEEESSCC------------CEEEECC
T ss_pred             cCCCEEEEeCCCCHHHHHHHHHHHHCCC-EEEEEeCChHHHHHHHHHhCCceEEEEcc
Confidence            4568999999999999999999999995 89999998754321 11112456677777

>2hq1_A Glucose/ribitol dehydrogenase; CTH-1438, structural genomics, southeast collaboratory for structural genomics, secsg, PSI; 1.90A {Clostridium thermocellum}

Probab=98.85  E-value=6.5e-09  Score=93.25  Aligned_cols=36  Identities=31%  Similarity=0.398  Sum_probs=31.9

Q ss_pred             ccCCeEEEEcCCChhHHHHHHHHHHcCCceEEEEecC
Q 017760            9 IEGKTFLVTGGLGHVGSALCLELVRRGAYQVRAFDLR   45 (366)
Q Consensus         9 ~~~~~VlITGgtGfiG~~L~~~L~~~g~~~V~~~dr~   45 (366)
                      +++++++||||+|++|++++++|+++|+ +|++++++
T Consensus         3 l~~~~vlItGasggiG~~~a~~l~~~G~-~V~~~~~r   38 (247)
T 2hq1_A            3 LKGKTAIVTGSSRGLGKAIAWKLGNMGA-NIVLNGSP   38 (247)
T ss_dssp             TTTCEEEESSCSSHHHHHHHHHHHHTTC-EEEEEECT
T ss_pred             CCCcEEEEECCCchHHHHHHHHHHHCCC-EEEEEcCc
Confidence            4568999999999999999999999995 89999544

>1spx_A Short-chain reductase family member (5L265); parallel beta-sheet of seven strands in the order 3214567; 2.10A {Caenorhabditis elegans} SCOP: c.2.1.2

Probab=98.85  E-value=2.7e-09  Score=97.76  Aligned_cols=85  Identities=8%  Similarity=-0.042  Sum_probs=44.4

Q ss_pred             CCceEEEEeCCccccCCCCCCH---HHH------HHHHHcCCCCeeecCCCcceeceeHHHHHHHHHHHHhccccCCCCC
Q 017760           71 KCLYTCAVRPAAIYGPGEERHL---PRI------VSLAKLGLVPFKIGEPSVKTDWIYVDNLVLALILASMGLLDDIPGQ  141 (366)
Q Consensus        71 ~~l~~~ilRp~~iyGp~~~~~l---~~~------i~~~~~g~~~~~~g~~~~~~~~v~vdDla~a~~~a~~~l~~~~~~~  141 (366)
                      .++++++++|+.++++......   +..      ...+....         ....+.+.+|+|++++.++..   +    
T Consensus       183 ~gi~v~~v~Pg~v~t~~~~~~~~~~~~~~~~~~~~~~~~~~~---------p~~~~~~~~dvA~~v~~l~s~---~----  246 (278)
T 1spx_A          183 HGIRVNSISPGLVATGFGSAMGMPEETSKKFYSTMATMKECV---------PAGVMGQPQDIAEVIAFLADR---K----  246 (278)
T ss_dssp             GTCEEEEEEECCBCCCC--------------HHHHHHHHHHC---------TTSSCBCHHHHHHHHHHHHCH---H----
T ss_pred             cCcEEEEEecCcccCccccccccCchhhhhhhHHHHHHHhcC---------CCcCCCCHHHHHHHHHHHcCc---c----
Confidence            4678888888888887532110   011      11111111         113478999999999888741   0    


Q ss_pred             CCCCC-CCCccEEecCCCCCCHHHHHHHHHHhc
Q 017760          142 KGRPI-ASGQPYFVSDGFPINTFEFIGPLLKTL  173 (366)
Q Consensus       142 ~~~~~-~~g~~y~I~~~~~vs~~e~~~~l~~~l  173 (366)
                        ... ..|+.|++.+|...+..|+++.+.+.+
T Consensus       247 --~~~~~tG~~~~vdgG~~~~~~~~~~~~~~~~  277 (278)
T 1spx_A          247 --TSSYIIGHQLVVDGGSSLIMGLHCQDFAKLL  277 (278)
T ss_dssp             --HHTTCCSCEEEESTTGGGC------------
T ss_pred             --ccCcccCcEEEECCCcccccCcccccHHHHh
Confidence              112 568999999999999999998887654

>3s55_A Putative short-chain dehydrogenase/reductase; structural genomics, seattle structural genomics center for infectious disease, ssgcid; HET: NAD; 2.10A {Mycobacterium abscessus} SCOP: c.2.1.0

Probab=98.84  E-value=3.3e-09  Score=97.48  Aligned_cols=40  Identities=35%  Similarity=0.518  Sum_probs=35.4

Q ss_pred             ccccCCeEEEEcCCChhHHHHHHHHHHcCCceEEEEecCCC
Q 017760            7 EGIEGKTFLVTGGLGHVGSALCLELVRRGAYQVRAFDLRTN   47 (366)
Q Consensus         7 ~~~~~~~VlITGgtGfiG~~L~~~L~~~g~~~V~~~dr~~~   47 (366)
                      ..+++++++||||+|.||+++++.|+++|+ +|++++|++.
T Consensus         6 ~~l~~k~~lVTGas~gIG~a~a~~l~~~G~-~V~~~~r~~~   45 (281)
T 3s55_A            6 ADFEGKTALITGGARGMGRSHAVALAEAGA-DIAICDRCEN   45 (281)
T ss_dssp             CTTTTCEEEEETTTSHHHHHHHHHHHHTTC-EEEEEECCSC
T ss_pred             cccCCCEEEEeCCCchHHHHHHHHHHHCCC-eEEEEeCCcc
Confidence            345678999999999999999999999995 8999999743

>3ak4_A NADH-dependent quinuclidinone reductase; SDR, (R)-3-quinuclidinol, chiral alcohol, oxidoreductase; HET: NAD; 2.00A {Agrobacterium tumefaciens}

Probab=98.84  E-value=4.3e-09  Score=95.67  Aligned_cols=38  Identities=34%  Similarity=0.545  Sum_probs=34.3

Q ss_pred             cccCCeEEEEcCCChhHHHHHHHHHHcCCceEEEEecCC
Q 017760            8 GIEGKTFLVTGGLGHVGSALCLELVRRGAYQVRAFDLRT   46 (366)
Q Consensus         8 ~~~~~~VlITGgtGfiG~~L~~~L~~~g~~~V~~~dr~~   46 (366)
                      .+++++++||||+|++|+++++.|+++|+ +|++++|++
T Consensus         9 ~l~~k~vlVTGas~gIG~~ia~~l~~~G~-~V~~~~r~~   46 (263)
T 3ak4_A            9 DLSGRKAIVTGGSKGIGAAIARALDKAGA-TVAIADLDV   46 (263)
T ss_dssp             CCTTCEEEEETTTSHHHHHHHHHHHHTTC-EEEEEESCH
T ss_pred             CCCCCEEEEeCCCChHHHHHHHHHHHCCC-EEEEEeCCH
Confidence            35678999999999999999999999995 899999875

>1ja9_A 4HNR, 1,3,6,8-tetrahydroxynaphthalene reductase; protein-NADPH-active site inhibitor complex, oxidoreductase, chain dehydrogenase; HET: NDP PYQ; 1.50A {Magnaporthe grisea} SCOP: c.2.1.2

Probab=98.84  E-value=3.7e-09  Score=96.30  Aligned_cols=37  Identities=35%  Similarity=0.411  Sum_probs=33.3

Q ss_pred             cccCCeEEEEcCCChhHHHHHHHHHHcCCceEEEEecC
Q 017760            8 GIEGKTFLVTGGLGHVGSALCLELVRRGAYQVRAFDLR   45 (366)
Q Consensus         8 ~~~~~~VlITGgtGfiG~~L~~~L~~~g~~~V~~~dr~   45 (366)
                      .+++++|+||||+|++|++++++|+++|+ +|++++|+
T Consensus        18 ~~~~k~vlItGasggiG~~la~~l~~~G~-~v~~~~r~   54 (274)
T 1ja9_A           18 PLAGKVALTTGAGRGIGRGIAIELGRRGA-SVVVNYGS   54 (274)
T ss_dssp             TTTTCEEEETTTTSHHHHHHHHHHHHTTC-EEEEEESS
T ss_pred             CCCCCEEEEeCCCchHHHHHHHHHHHCCC-EEEEEcCC
Confidence            35678999999999999999999999995 89999984

>3f9i_A 3-oxoacyl-[acyl-carrier-protein] reductase; 3-ketoacyl-(acyl-carrier-protein) reductase, FAT biosynthesis, lipid synthesis, NADP; 2.25A {Rickettsia prowazekii} SCOP: c.2.1.0

Probab=98.84  E-value=6.9e-09  Score=93.40  Aligned_cols=135  Identities=16%  Similarity=0.132  Sum_probs=87.5

Q ss_pred             cccccCCeEEEEcCCChhHHHHHHHHHHcCCceEEEEecCCCCccc-ccccCCCeEEEEcc-------------------
Q 017760            6 NEGIEGKTFLVTGGLGHVGSALCLELVRRGAYQVRAFDLRTNSPWS-HLLINHGVHCIQGL-------------------   65 (366)
Q Consensus         6 ~~~~~~~~VlITGgtGfiG~~L~~~L~~~g~~~V~~~dr~~~~~~~-~~~~~~~v~~i~gD-------------------   65 (366)
                      ....++++|+||||+|++|+++++.|+++|+ +|++++|+...... .......+.++.+|                   
T Consensus         9 ~~~~~~k~vlVTGas~gIG~~~a~~l~~~G~-~V~~~~r~~~~~~~~~~~~~~~~~~~~~D~~~~~~~~~~~~~~~~id~   87 (249)
T 3f9i_A            9 MIDLTGKTSLITGASSGIGSAIARLLHKLGS-KVIISGSNEEKLKSLGNALKDNYTIEVCNLANKEECSNLISKTSNLDI   87 (249)
T ss_dssp             CCCCTTCEEEETTTTSHHHHHHHHHHHHTTC-EEEEEESCHHHHHHHHHHHCSSEEEEECCTTSHHHHHHHHHTCSCCSE
T ss_pred             cccCCCCEEEEECCCChHHHHHHHHHHHCCC-EEEEEcCCHHHHHHHHHHhccCccEEEcCCCCHHHHHHHHHhcCCCCE
Confidence            3446679999999999999999999999995 89999987532110 01112345555555                   


Q ss_pred             ------------------------------------------------------------------------c-------
Q 017760           66 ------------------------------------------------------------------------R-------   66 (366)
Q Consensus        66 ------------------------------------------------------------------------k-------   66 (366)
                                                                                              |       
T Consensus        88 li~~Ag~~~~~~~~~~~~~~~~~~~~~N~~~~~~l~~~~~~~~~~~~~g~iv~isS~~~~~~~~~~~~Y~~sK~a~~~~~  167 (249)
T 3f9i_A           88 LVCNAGITSDTLAIRMKDQDFDKVIDINLKANFILNREAIKKMIQKRYGRIINISSIVGIAGNPGQANYCASKAGLIGMT  167 (249)
T ss_dssp             EEECCC-------------CHHHHHHHHTHHHHHHHHHHHHHHHHHTCEEEEEECCCCC--CCSCSHHHHHHHHHHHHHH
T ss_pred             EEECCCCCCCCccccCCHHHHHHHHHHHHHHHHHHHHHHHHHHHhCCCcEEEEEccHHhccCCCCCchhHHHHHHHHHHH
Confidence                                                                                    0       


Q ss_pred             -c----CCCCCceEEEEeCCccccCCCCCCHHHHHHHHHcCCCCeeecCCCcceeceeHHHHHHHHHHHHhccccCCCCC
Q 017760           67 -K----NNRKCLYTCAVRPAAIYGPGEERHLPRIVSLAKLGLVPFKIGEPSVKTDWIYVDNLVLALILASMGLLDDIPGQ  141 (366)
Q Consensus        67 -s----~~~~~l~~~ilRp~~iyGp~~~~~l~~~i~~~~~g~~~~~~g~~~~~~~~v~vdDla~a~~~a~~~l~~~~~~~  141 (366)
                       +    ....++++.+++|+.+.++......+........+.         ....+.+.+|+|+++..++..        
T Consensus       168 ~~la~e~~~~gi~v~~v~PG~v~t~~~~~~~~~~~~~~~~~~---------~~~~~~~~~dva~~~~~l~s~--------  230 (249)
T 3f9i_A          168 KSLSYEVATRGITVNAVAPGFIKSDMTDKLNEKQREAIVQKI---------PLGTYGIPEDVAYAVAFLASN--------  230 (249)
T ss_dssp             HHHHHHHGGGTEEEEEEEECCBC------CCHHHHHHHHHHC---------TTCSCBCHHHHHHHHHHHHSG--------
T ss_pred             HHHHHHHHHcCcEEEEEecCccccCcccccCHHHHHHHHhcC---------CCCCCcCHHHHHHHHHHHcCC--------
Confidence             0    223578899999999988865444444433333222         224578899999999988852        


Q ss_pred             CCCCCCCCccEEecCCCC
Q 017760          142 KGRPIASGQPYFVSDGFP  159 (366)
Q Consensus       142 ~~~~~~~g~~y~I~~~~~  159 (366)
                       ......|+.+++.+|..
T Consensus       231 -~~~~~tG~~~~vdgG~~  247 (249)
T 3f9i_A          231 -NASYITGQTLHVNGGML  247 (249)
T ss_dssp             -GGTTCCSCEEEESTTSS
T ss_pred             -ccCCccCcEEEECCCEe
Confidence             02345799999988754

>3qiv_A Short-chain dehydrogenase or 3-oxoacyl-[acyl-CARR protein] reductase; structural genomics; 2.25A {Mycobacterium avium subsp}

Probab=98.83  E-value=5.1e-09  Score=94.48  Aligned_cols=58  Identities=24%  Similarity=0.236  Sum_probs=42.8

Q ss_pred             ccccCCeEEEEcCCChhHHHHHHHHHHcCCceEEEEecCCCCccc--ccc--cCCCeEEEEcc
Q 017760            7 EGIEGKTFLVTGGLGHVGSALCLELVRRGAYQVRAFDLRTNSPWS--HLL--INHGVHCIQGL   65 (366)
Q Consensus         7 ~~~~~~~VlITGgtGfiG~~L~~~L~~~g~~~V~~~dr~~~~~~~--~~~--~~~~v~~i~gD   65 (366)
                      +.+++++++||||+|.+|++++++|+++|+ +|++++|+......  ..+  ....+.++.+|
T Consensus         5 ~~~~~k~vlITGas~giG~~~a~~l~~~G~-~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~D   66 (253)
T 3qiv_A            5 MRFENKVGIVTGSGGGIGQAYAEALAREGA-AVVVADINAEAAEAVAKQIVADGGTAISVAVD   66 (253)
T ss_dssp             CTTTTCEEEEETTTSHHHHHHHHHHHHTTC-EEEEEESCHHHHHHHHHHHHHTTCEEEEEECC
T ss_pred             cccCCCEEEEECCCChHHHHHHHHHHHCCC-EEEEEcCCHHHHHHHHHHHHhcCCcEEEEEcc
Confidence            345678999999999999999999999995 89999987532211  011  12456677777

>2c07_A 3-oxoacyl-(acyl-carrier protein) reductase; oxidoreductase, FABG, short-chain alcohol reductase, fatty acid biosynthesis, apicoplast; 1.5A {Plasmodium falciparum} SCOP: c.2.1.2

Probab=98.83  E-value=1e-08  Score=94.36  Aligned_cols=37  Identities=24%  Similarity=0.231  Sum_probs=33.0

Q ss_pred             ccCCeEEEEcCCChhHHHHHHHHHHcCCceEEEEecCC
Q 017760            9 IEGKTFLVTGGLGHVGSALCLELVRRGAYQVRAFDLRT   46 (366)
Q Consensus         9 ~~~~~VlITGgtGfiG~~L~~~L~~~g~~~V~~~dr~~   46 (366)
                      +++++|+||||+|++|+++++.|+++|+ +|++++|++
T Consensus        42 l~~k~vlITGasggIG~~la~~L~~~G~-~V~~~~r~~   78 (285)
T 2c07_A           42 GENKVALVTGAGRGIGREIAKMLAKSVS-HVICISRTQ   78 (285)
T ss_dssp             CSSCEEEEESTTSHHHHHHHHHHTTTSS-EEEEEESSH
T ss_pred             CCCCEEEEECCCcHHHHHHHHHHHHcCC-EEEEEcCCH
Confidence            4568999999999999999999999995 899988764

>3gem_A Short chain dehydrogenase; structural genomics, APC65077, oxidoreductase, PSI-2, protein structure initiative; 1.83A {Pseudomonas syringae PV}

Probab=98.83  E-value=8.2e-09  Score=93.88  Aligned_cols=55  Identities=22%  Similarity=0.268  Sum_probs=41.0

Q ss_pred             ccCCeEEEEcCCChhHHHHHHHHHHcCCceEEEEecCCCCcccccccCCCeEEEEcc
Q 017760            9 IEGKTFLVTGGLGHVGSALCLELVRRGAYQVRAFDLRTNSPWSHLLINHGVHCIQGL   65 (366)
Q Consensus         9 ~~~~~VlITGgtGfiG~~L~~~L~~~g~~~V~~~dr~~~~~~~~~~~~~~v~~i~gD   65 (366)
                      +++++++||||+|+||+++++.|++.|+ +|++++|+.... ...+...++.++.+|
T Consensus        25 l~~k~vlVTGas~gIG~aia~~l~~~G~-~V~~~~r~~~~~-~~~~~~~~~~~~~~D   79 (260)
T 3gem_A           25 LSSAPILITGASQRVGLHCALRLLEHGH-RVIISYRTEHAS-VTELRQAGAVALYGD   79 (260)
T ss_dssp             --CCCEEESSTTSHHHHHHHHHHHHTTC-CEEEEESSCCHH-HHHHHHHTCEEEECC
T ss_pred             CCCCEEEEECCCCHHHHHHHHHHHHCCC-EEEEEeCChHHH-HHHHHhcCCeEEECC
Confidence            4568899999999999999999999995 899999986432 111222346677777

>3v2h_A D-beta-hydroxybutyrate dehydrogenase; structural genomics, PSI-biology, NEW YORK structural genomi research consortium, nysgrc; 3.00A {Sinorhizobium meliloti}

Probab=98.82  E-value=7.7e-09  Score=95.13  Aligned_cols=56  Identities=20%  Similarity=0.170  Sum_probs=41.3

Q ss_pred             ccCCeEEEEcCCChhHHHHHHHHHHcCCceEEEEecCCCCccc---c---cccCCCeEEEEcc
Q 017760            9 IEGKTFLVTGGLGHVGSALCLELVRRGAYQVRAFDLRTNSPWS---H---LLINHGVHCIQGL   65 (366)
Q Consensus         9 ~~~~~VlITGgtGfiG~~L~~~L~~~g~~~V~~~dr~~~~~~~---~---~~~~~~v~~i~gD   65 (366)
                      +++++++||||+|+||+++++.|+++|+ +|++.+|+......   .   ......+.++++|
T Consensus        23 l~~k~~lVTGas~GIG~~ia~~la~~G~-~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~~D   84 (281)
T 3v2h_A           23 MMTKTAVITGSTSGIGLAIARTLAKAGA-NIVLNGFGAPDEIRTVTDEVAGLSSGTVLHHPAD   84 (281)
T ss_dssp             CTTCEEEEETCSSHHHHHHHHHHHHTTC-EEEEECCCCHHHHHHHHHHHHTTCSSCEEEECCC
T ss_pred             cCCCEEEEeCCCcHHHHHHHHHHHHCCC-EEEEEeCCChHHHHHHHHHHhhccCCcEEEEeCC
Confidence            4467899999999999999999999995 89999985422110   0   1113467777777

>2d1y_A Hypothetical protein TT0321; strucrtural genomics, thermus thermophilus HB8, structural genomics, NPPSFA; HET: NAD; 1.65A {Thermus thermophilus} SCOP: c.2.1.2

Probab=98.80  E-value=6e-09  Score=94.38  Aligned_cols=39  Identities=41%  Similarity=0.625  Sum_probs=34.9

Q ss_pred             ccCCeEEEEcCCChhHHHHHHHHHHcCCceEEEEecCCCC
Q 017760            9 IEGKTFLVTGGLGHVGSALCLELVRRGAYQVRAFDLRTNS   48 (366)
Q Consensus         9 ~~~~~VlITGgtGfiG~~L~~~L~~~g~~~V~~~dr~~~~   48 (366)
                      +++++++||||+|++|+++++.|+++|+ +|++++|++..
T Consensus         4 l~~k~vlVTGas~gIG~~ia~~l~~~G~-~V~~~~r~~~~   42 (256)
T 2d1y_A            4 FAGKGVLVTGGARGIGRAIAQAFAREGA-LVALCDLRPEG   42 (256)
T ss_dssp             TTTCEEEEETTTSHHHHHHHHHHHHTTC-EEEEEESSTTH
T ss_pred             CCCCEEEEeCCCCHHHHHHHHHHHHCCC-EEEEEeCChhH
Confidence            5678999999999999999999999995 89999998653

>3sx2_A Putative 3-ketoacyl-(acyl-carrier-protein) reduct; ssgcid, 3-ketoacyl-(acyl-carrier-protein) reductase, mycobac paratuberculosis; HET: NAD; 1.50A {Mycobacterium avium subsp}

Probab=98.78  E-value=1.8e-08  Score=92.19  Aligned_cols=45  Identities=31%  Similarity=0.402  Sum_probs=35.3

Q ss_pred             CCccccccccCCeEEEEcCCChhHHHHHHHHHHcCCceEEEEecCC
Q 017760            1 MHLSENEGIEGKTFLVTGGLGHVGSALCLELVRRGAYQVRAFDLRT   46 (366)
Q Consensus         1 m~~~~~~~~~~~~VlITGgtGfiG~~L~~~L~~~g~~~V~~~dr~~   46 (366)
                      |..+....+++++++||||+|.||+++++.|+++|+ +|++++++.
T Consensus         3 m~~~~~~~l~gk~vlVTGas~gIG~~ia~~l~~~G~-~V~~~~r~~   47 (278)
T 3sx2_A            3 MPRSSEGPLTGKVAFITGAARGQGRAHAVRLAADGA-DIIAVDLCD   47 (278)
T ss_dssp             ------CTTTTCEEEEESTTSHHHHHHHHHHHHTTC-EEEEEECCS
T ss_pred             CCCCCCCCCCCCEEEEECCCChHHHHHHHHHHHCCC-eEEEEeccc
Confidence            333444456789999999999999999999999995 899999874

>3tzq_B Short-chain type dehydrogenase/reductase; ssgcid, structural genomics, seattle structural genomics CEN infectious disease, oxidoreductase; 2.50A {Mycobacterium marinum} SCOP: c.2.1.0

Probab=98.78  E-value=4.3e-08  Score=89.57  Aligned_cols=57  Identities=25%  Similarity=0.239  Sum_probs=42.7

Q ss_pred             cccCCeEEEEcCCChhHHHHHHHHHHcCCceEEEEecCCCCccc-ccccCCCeEEEEcc
Q 017760            8 GIEGKTFLVTGGLGHVGSALCLELVRRGAYQVRAFDLRTNSPWS-HLLINHGVHCIQGL   65 (366)
Q Consensus         8 ~~~~~~VlITGgtGfiG~~L~~~L~~~g~~~V~~~dr~~~~~~~-~~~~~~~v~~i~gD   65 (366)
                      .+++++++||||+|.||+++++.|+++|+ +|++++|+...... ......++.++.+|
T Consensus         8 ~l~~k~vlVTGas~gIG~aia~~l~~~G~-~V~~~~r~~~~~~~~~~~~~~~~~~~~~D   65 (271)
T 3tzq_B            8 ELENKVAIITGACGGIGLETSRVLARAGA-RVVLADLPETDLAGAAASVGRGAVHHVVD   65 (271)
T ss_dssp             TTTTCEEEEETTTSHHHHHHHHHHHHTTC-EEEEEECTTSCHHHHHHHHCTTCEEEECC
T ss_pred             CCCCCEEEEECCCcHHHHHHHHHHHHCCC-EEEEEcCCHHHHHHHHHHhCCCeEEEECC
Confidence            45678999999999999999999999995 89999998654211 01113456666666

>3gaf_A 7-alpha-hydroxysteroid dehydrogenase; seattle structural genomics center for infectious disease, ssgcid, oxidoreductase, structural genomics; 2.20A {Brucella melitensis}

Probab=98.78  E-value=4.6e-09  Score=95.23  Aligned_cols=64  Identities=17%  Similarity=0.216  Sum_probs=44.8

Q ss_pred             CCccccccccCCeEEEEcCCChhHHHHHHHHHHcCCceEEEEecCCCCccc--ccc--cCCCeEEEEcc
Q 017760            1 MHLSENEGIEGKTFLVTGGLGHVGSALCLELVRRGAYQVRAFDLRTNSPWS--HLL--INHGVHCIQGL   65 (366)
Q Consensus         1 m~~~~~~~~~~~~VlITGgtGfiG~~L~~~L~~~g~~~V~~~dr~~~~~~~--~~~--~~~~v~~i~gD   65 (366)
                      |....+..+++++++||||+|.||+++++.|.++|+ +|++++|+......  ..+  ...++.++++|
T Consensus         2 m~~~~~~~l~~k~vlVTGas~gIG~~ia~~l~~~G~-~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~D   69 (256)
T 3gaf_A            2 MSYESPFHLNDAVAIVTGAAAGIGRAIAGTFAKAGA-SVVVTDLKSEGAEAVAAAIRQAGGKAIGLECN   69 (256)
T ss_dssp             ----CTTCCTTCEEEECSCSSHHHHHHHHHHHHHTC-EEEEEESSHHHHHHHHHHHHHTTCCEEEEECC
T ss_pred             CCCcCCCCCCCCEEEEECCCCHHHHHHHHHHHHCCC-EEEEEeCCHHHHHHHHHHHHhcCCcEEEEECC
Confidence            333444556788999999999999999999999995 89999987532211  011  13467777777

>2ph3_A 3-oxoacyl-[acyl carrier protein] reductase; TTHA0415, structural genomics, southea collaboratory for structural genomics, secsg; 1.91A {Thermus thermophilus HB8}

Probab=98.77  E-value=4.6e-09  Score=94.03  Aligned_cols=70  Identities=16%  Similarity=0.107  Sum_probs=46.4

Q ss_pred             CCceEEEEeCCccccCCCCCCHHHHHHHHHcCCCCeeecCCCcceeceeHHHHHHHHHHHHhccccCCCCCCCCCCCCCc
Q 017760           71 KCLYTCAVRPAAIYGPGEERHLPRIVSLAKLGLVPFKIGEPSVKTDWIYVDNLVLALILASMGLLDDIPGQKGRPIASGQ  150 (366)
Q Consensus        71 ~~l~~~ilRp~~iyGp~~~~~l~~~i~~~~~g~~~~~~g~~~~~~~~v~vdDla~a~~~a~~~l~~~~~~~~~~~~~~g~  150 (366)
                      .+++++++||+.++++......+........+.+         ...+++++|+|+++..++..   +      .....|+
T Consensus       173 ~gi~v~~v~Pg~v~t~~~~~~~~~~~~~~~~~~~---------~~~~~~~~dva~~~~~l~~~---~------~~~~~G~  234 (245)
T 2ph3_A          173 RGITVNAVAPGFIETEMTERLPQEVKEAYLKQIP---------AGRFGRPEEVAEAVAFLVSE---K------AGYITGQ  234 (245)
T ss_dssp             GTEEEEEEEECSBCCHHHHTSCHHHHHHHHHTCT---------TCSCBCHHHHHHHHHHHTSG---G------GTTCCSC
T ss_pred             cCeEEEEEEEEeecCcchhhcCHHHHHHHHhcCC---------CCCCcCHHHHHHHHHHHhCc---c------cccccCC
Confidence            4789999999999987533222333333333221         23578999999999988752   0      2234688


Q ss_pred             cEEecCCC
Q 017760          151 PYFVSDGF  158 (366)
Q Consensus       151 ~y~I~~~~  158 (366)
                      .|++.+|.
T Consensus       235 ~~~v~gg~  242 (245)
T 2ph3_A          235 TLCVDGGL  242 (245)
T ss_dssp             EEEESTTC
T ss_pred             EEEECCCC
Confidence            99998774

>2q2v_A Beta-D-hydroxybutyrate dehydrogenase; SDR, oxidoreductase; HET: NAD; 1.90A {Pseudomonas putida} PDB: 2q2q_A* 2q2w_A

Probab=98.77  E-value=1.9e-08  Score=90.92  Aligned_cols=56  Identities=23%  Similarity=0.246  Sum_probs=41.4

Q ss_pred             ccCCeEEEEcCCChhHHHHHHHHHHcCCceEEEEecCCCCccccccc--CCCeEEEEcc
Q 017760            9 IEGKTFLVTGGLGHVGSALCLELVRRGAYQVRAFDLRTNSPWSHLLI--NHGVHCIQGL   65 (366)
Q Consensus         9 ~~~~~VlITGgtGfiG~~L~~~L~~~g~~~V~~~dr~~~~~~~~~~~--~~~v~~i~gD   65 (366)
                      +++++++||||+|++|+++++.|+++|+ +|++++|+........+.  ..++.++.+|
T Consensus         2 l~~k~vlVTGas~giG~~ia~~l~~~G~-~V~~~~r~~~~~~~~~l~~~~~~~~~~~~D   59 (255)
T 2q2v_A            2 LKGKTALVTGSTSGIGLGIAQVLARAGA-NIVLNGFGDPAPALAEIARHGVKAVHHPAD   59 (255)
T ss_dssp             CTTCEEEESSCSSHHHHHHHHHHHHTTC-EEEEECSSCCHHHHHHHHTTSCCEEEECCC
T ss_pred             CCCCEEEEeCCCcHHHHHHHHHHHHCCC-EEEEEeCCchHHHHHHHHhcCCceEEEeCC
Confidence            4568999999999999999999999995 899999876511111111  2346666777

>2cfc_A 2-(R)-hydroxypropyl-COM dehydrogenase; NAD, oxidoreductase; HET: NAD KPC; 1.8A {Xanthobacter autotrophicus}

Probab=98.77  E-value=1.8e-08  Score=90.42  Aligned_cols=35  Identities=31%  Similarity=0.502  Sum_probs=32.2

Q ss_pred             CCeEEEEcCCChhHHHHHHHHHHcCCceEEEEecCC
Q 017760           11 GKTFLVTGGLGHVGSALCLELVRRGAYQVRAFDLRT   46 (366)
Q Consensus        11 ~~~VlITGgtGfiG~~L~~~L~~~g~~~V~~~dr~~   46 (366)
                      +++++||||+|++|++++++|+++|+ +|++++|+.
T Consensus         2 ~k~vlItGasggiG~~~a~~l~~~G~-~V~~~~r~~   36 (250)
T 2cfc_A            2 SRVAIVTGASSGNGLAIATRFLARGD-RVAALDLSA   36 (250)
T ss_dssp             CCEEEEETTTSHHHHHHHHHHHHTTC-EEEEEESCH
T ss_pred             CCEEEEeCCCchHHHHHHHHHHHCCC-EEEEEeCCH
Confidence            47899999999999999999999995 899999875

>1xq1_A Putative tropinone reducatse; structural genomics, protein structure initiative, CESG, AT1 reductively methylated protein; 2.10A {Arabidopsis thaliana} SCOP: c.2.1.2 PDB: 2q45_A

Probab=98.76  E-value=6.6e-09  Score=94.40  Aligned_cols=38  Identities=32%  Similarity=0.458  Sum_probs=34.1

Q ss_pred             cccCCeEEEEcCCChhHHHHHHHHHHcCCceEEEEecCC
Q 017760            8 GIEGKTFLVTGGLGHVGSALCLELVRRGAYQVRAFDLRT   46 (366)
Q Consensus         8 ~~~~~~VlITGgtGfiG~~L~~~L~~~g~~~V~~~dr~~   46 (366)
                      .+++++|+||||+|++|+++++.|+++|+ +|++++|+.
T Consensus        11 ~l~~k~vlITGasggiG~~la~~l~~~G~-~V~~~~r~~   48 (266)
T 1xq1_A           11 SLKAKTVLVTGGTKGIGHAIVEEFAGFGA-VIHTCARNE   48 (266)
T ss_dssp             CCTTCEEEETTTTSHHHHHHHHHHHHTTC-EEEEEESCH
T ss_pred             CCCCCEEEEECCCCHHHHHHHHHHHHCCC-EEEEEeCCH
Confidence            35678999999999999999999999995 899999874

>3rih_A Short chain dehydrogenase or reductase; structural genomics, seattle structural genomics center for infectious disease, ssgcid; HET: PG5; 2.15A {Mycobacterium abscessus}

Probab=98.76  E-value=1.7e-08  Score=93.47  Aligned_cols=56  Identities=23%  Similarity=0.229  Sum_probs=43.2

Q ss_pred             ccCCeEEEEcCCChhHHHHHHHHHHcCCceEEEEecCCCCccc--cccc---CCCeEEEEcc
Q 017760            9 IEGKTFLVTGGLGHVGSALCLELVRRGAYQVRAFDLRTNSPWS--HLLI---NHGVHCIQGL   65 (366)
Q Consensus         9 ~~~~~VlITGgtGfiG~~L~~~L~~~g~~~V~~~dr~~~~~~~--~~~~---~~~v~~i~gD   65 (366)
                      +++++++||||+|+||+++++.|++.|+ +|++++|+......  ..+.   ..++.++++|
T Consensus        39 l~~k~vlVTGas~GIG~aia~~la~~G~-~V~~~~r~~~~~~~~~~~l~~~~~~~~~~~~~D   99 (293)
T 3rih_A           39 LSARSVLVTGGTKGIGRGIATVFARAGA-NVAVAARSPRELSSVTAELGELGAGNVIGVRLD   99 (293)
T ss_dssp             CTTCEEEETTTTSHHHHHHHHHHHHTTC-EEEEEESSGGGGHHHHHHHTTSSSSCEEEEECC
T ss_pred             CCCCEEEEeCCCcHHHHHHHHHHHHCCC-EEEEEECCHHHHHHHHHHHHhhCCCcEEEEEEe
Confidence            4568999999999999999999999995 89999988643211  1111   1467888888

>3i4f_A 3-oxoacyl-[acyl-carrier protein] reductase; structural genomics, 3-oxoacyl-reductase, PSI-2; 2.39A {Bacillus thuringiensis serovar kurstakorganism_taxid} SCOP: c.2.1.0

Probab=98.76  E-value=1.6e-08  Score=91.82  Aligned_cols=135  Identities=12%  Similarity=0.102  Sum_probs=90.3

Q ss_pred             cCCeEEEEcCCChhHHHHHHHHHHcCCceEEEEecCCCCccc--c---cccCCCeEEEEcc-------------------
Q 017760           10 EGKTFLVTGGLGHVGSALCLELVRRGAYQVRAFDLRTNSPWS--H---LLINHGVHCIQGL-------------------   65 (366)
Q Consensus        10 ~~~~VlITGgtGfiG~~L~~~L~~~g~~~V~~~dr~~~~~~~--~---~~~~~~v~~i~gD-------------------   65 (366)
                      ++++++||||+|+||++++++|+++|+ +|++++++......  .   .....++.++++|                   
T Consensus         6 ~~k~vlVTGas~gIG~~~a~~l~~~G~-~v~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~Dl~~~~~v~~~~~~~~~~~g   84 (264)
T 3i4f_A            6 FVRHALITAGTKGLGKQVTEKLLAKGY-SVTVTYHSDTTAMETMKETYKDVEERLQFVQADVTKKEDLHKIVEEAMSHFG   84 (264)
T ss_dssp             CCCEEEETTTTSHHHHHHHHHHHHTTC-EEEEEESSCHHHHHHHHHHTGGGGGGEEEEECCTTSHHHHHHHHHHHHHHHS
T ss_pred             ccCEEEEeCCCchhHHHHHHHHHHCCC-EEEEEcCCChHHHHHHHHHHHhcCCceEEEEecCCCHHHHHHHHHHHHHHhC
Confidence            457899999999999999999999995 89999887533211  0   0112457777777                   


Q ss_pred             --------------------------------------------------------------------------------
Q 017760           66 --------------------------------------------------------------------------------   65 (366)
Q Consensus        66 --------------------------------------------------------------------------------   65 (366)
                                                                                                      
T Consensus        85 ~id~lv~~Ag~~~~~~~~~~~~~~~~~~~~~~~N~~g~~~l~~~~~~~~~~~~~g~iv~iss~~~~~~~~~~~~~~Y~as  164 (264)
T 3i4f_A           85 KIDFLINNAGPYVFERKKLVDYEEDEWNEMIQGNLTAVFHLLKLVVPVMRKQNFGRIINYGFQGADSAPGWIYRSAFAAA  164 (264)
T ss_dssp             CCCEEECCCCCCCCSCCCGGGCCHHHHHHHHHHHTHHHHHHHHHHHHHHHHHTCEEEEEECCTTGGGCCCCTTCHHHHHH
T ss_pred             CCCEEEECCcccccCCCccccCCHHHHHHHHHhccHHHHHHHHHHHHHHHhcCCCeEEEEeechhcccCCCCCCchhHHH
Confidence                                                                                            


Q ss_pred             c--------c----CCCCCceEEEEeCCccccCCCCCCHHHHHHHHHcCCCCeeecCCCcceeceeHHHHHHHHHHHHhc
Q 017760           66 R--------K----NNRKCLYTCAVRPAAIYGPGEERHLPRIVSLAKLGLVPFKIGEPSVKTDWIYVDNLVLALILASMG  133 (366)
Q Consensus        66 k--------s----~~~~~l~~~ilRp~~iyGp~~~~~l~~~i~~~~~g~~~~~~g~~~~~~~~v~vdDla~a~~~a~~~  133 (366)
                      |        +    ....++++.+++|+.++++......+.........         .....+.+.+|+|+++..++..
T Consensus       165 Kaa~~~~~~~la~e~~~~gi~v~~v~PG~v~t~~~~~~~~~~~~~~~~~---------~p~~r~~~~~dva~~v~~l~s~  235 (264)
T 3i4f_A          165 KVGLVSLTKTVAYEEAEYGITANMVCPGDIIGEMKEATIQEARQLKEHN---------TPIGRSGTGEDIARTISFLCED  235 (264)
T ss_dssp             HHHHHHHHHHHHHHHGGGTEEEEEEEECCCCGGGGSCCHHHHHHC-----------------CCCCHHHHHHHHHHHHSG
T ss_pred             HHHHHHHHHHHHHHhhhcCcEEEEEccCCccCccchhccHHHHHHHhhc---------CCCCCCcCHHHHHHHHHHHcCc
Confidence            0        0    12357889999999999887655554433322211         1223467899999999988852


Q ss_pred             cccCCCCCCCCCCCCCccEEecCCCCCCHH
Q 017760          134 LLDDIPGQKGRPIASGQPYFVSDGFPINTF  163 (366)
Q Consensus       134 l~~~~~~~~~~~~~~g~~y~I~~~~~vs~~  163 (366)
                               ......|+.+++.+|-.....
T Consensus       236 ---------~~~~itG~~i~vdGG~~~~~~  256 (264)
T 3i4f_A          236 ---------DSDMITGTIIEVTGAVDVIHR  256 (264)
T ss_dssp             ---------GGTTCCSCEEEESCSCCCCC-
T ss_pred             ---------ccCCCCCcEEEEcCceeeccC
Confidence                     123467999999988765543

>3pk0_A Short-chain dehydrogenase/reductase SDR; ssgcid, structural genomics, seattle structural genomics CEN infectious disease; 1.75A {Mycobacterium smegmatis} SCOP: c.2.1.0

Probab=98.75  E-value=1.6e-08  Score=92.05  Aligned_cols=57  Identities=25%  Similarity=0.270  Sum_probs=43.4

Q ss_pred             cccCCeEEEEcCCChhHHHHHHHHHHcCCceEEEEecCCCCccc--ccc---cCCCeEEEEcc
Q 017760            8 GIEGKTFLVTGGLGHVGSALCLELVRRGAYQVRAFDLRTNSPWS--HLL---INHGVHCIQGL   65 (366)
Q Consensus         8 ~~~~~~VlITGgtGfiG~~L~~~L~~~g~~~V~~~dr~~~~~~~--~~~---~~~~v~~i~gD   65 (366)
                      .+++++++||||+|.||+++++.|.++|+ +|++++|+......  ..+   ...++.++++|
T Consensus         7 ~l~~k~vlVTGas~gIG~aia~~l~~~G~-~V~~~~r~~~~~~~~~~~l~~~~~~~~~~~~~D   68 (262)
T 3pk0_A            7 DLQGRSVVVTGGTKGIGRGIATVFARAGA-NVAVAGRSTADIDACVADLDQLGSGKVIGVQTD   68 (262)
T ss_dssp             CCTTCEEEETTCSSHHHHHHHHHHHHTTC-EEEEEESCHHHHHHHHHHHHTTSSSCEEEEECC
T ss_pred             CCCCCEEEEECCCcHHHHHHHHHHHHCCC-EEEEEeCCHHHHHHHHHHHHhhCCCcEEEEEcC
Confidence            45678999999999999999999999995 89999987543211  111   11467888888

>1o5i_A 3-oxoacyl-(acyl carrier protein) reductase; TM1169, structur genomics, JCSG, PSI, protein structure initiative, joint CE structural genomics; HET: NAD; 2.50A {Thermotoga maritima} SCOP: c.2.1.2

Probab=98.74  E-value=2.1e-08  Score=90.45  Aligned_cols=39  Identities=28%  Similarity=0.312  Sum_probs=34.5

Q ss_pred             ccccCCeEEEEcCCChhHHHHHHHHHHcCCceEEEEecCC
Q 017760            7 EGIEGKTFLVTGGLGHVGSALCLELVRRGAYQVRAFDLRT   46 (366)
Q Consensus         7 ~~~~~~~VlITGgtGfiG~~L~~~L~~~g~~~V~~~dr~~   46 (366)
                      ...++++++||||+|++|+++++.|+++|+ +|++++|++
T Consensus        15 ~~~~~k~vlVTGas~gIG~~~a~~l~~~G~-~V~~~~r~~   53 (249)
T 1o5i_A           15 LGIRDKGVLVLAASRGIGRAVADVLSQEGA-EVTICARNE   53 (249)
T ss_dssp             -CCTTCEEEEESCSSHHHHHHHHHHHHTTC-EEEEEESCH
T ss_pred             hccCCCEEEEECCCCHHHHHHHHHHHHCCC-EEEEEcCCH
Confidence            346678999999999999999999999995 899999874

>3n74_A 3-ketoacyl-(acyl-carrier-protein) reductase; seattle structural genomics center for infectious disease, S brucellosis; 2.20A {Brucella melitensis biovar abortus}

Probab=98.73  E-value=1.7e-08  Score=91.38  Aligned_cols=58  Identities=21%  Similarity=0.239  Sum_probs=43.3

Q ss_pred             ccccCCeEEEEcCCChhHHHHHHHHHHcCCceEEEEecCCCCccc-ccccCCCeEEEEcc
Q 017760            7 EGIEGKTFLVTGGLGHVGSALCLELVRRGAYQVRAFDLRTNSPWS-HLLINHGVHCIQGL   65 (366)
Q Consensus         7 ~~~~~~~VlITGgtGfiG~~L~~~L~~~g~~~V~~~dr~~~~~~~-~~~~~~~v~~i~gD   65 (366)
                      +.+++++++||||+|.+|++++++|+++|+ +|++++|+...... .......+.++.+|
T Consensus         5 m~l~~k~vlITGas~gIG~~~a~~l~~~G~-~V~~~~r~~~~~~~~~~~~~~~~~~~~~D   63 (261)
T 3n74_A            5 MSLEGKVALITGAGSGFGEGMAKRFAKGGA-KVVIVDRDKAGAERVAGEIGDAALAVAAD   63 (261)
T ss_dssp             CTTTTCEEEEETTTSHHHHHHHHHHHHTTC-EEEEEESCHHHHHHHHHHHCTTEEEEECC
T ss_pred             ccCCCCEEEEECCCchHHHHHHHHHHHCCC-EEEEEcCCHHHHHHHHHHhCCceEEEEec
Confidence            345678999999999999999999999995 89999987532211 11113456777777

>1edo_A Beta-keto acyl carrier protein reductase; nucleotide fold, rossmann fold, oxidoreductase; HET: NAP; 2.30A {Brassica napus} SCOP: c.2.1.2 PDB: 2cdh_G

Probab=98.72  E-value=1.7e-08  Score=90.37  Aligned_cols=72  Identities=10%  Similarity=0.037  Sum_probs=46.4

Q ss_pred             CCCceEEEEeCCccccCCCCCCHHHHHHHHHcCCCCeeecCCCcceeceeHHHHHHHHHHHHhccccCCCCCCCCCCCCC
Q 017760           70 RKCLYTCAVRPAAIYGPGEERHLPRIVSLAKLGLVPFKIGEPSVKTDWIYVDNLVLALILASMGLLDDIPGQKGRPIASG  149 (366)
Q Consensus        70 ~~~l~~~ilRp~~iyGp~~~~~l~~~i~~~~~g~~~~~~g~~~~~~~~v~vdDla~a~~~a~~~l~~~~~~~~~~~~~~g  149 (366)
                      ..+++++++||+.++++......+..........+         ...+++.+|+|+++..++..  +      ......|
T Consensus       171 ~~gi~v~~v~Pg~v~t~~~~~~~~~~~~~~~~~~~---------~~~~~~~~dva~~~~~l~~~--~------~~~~~~G  233 (244)
T 1edo_A          171 SRNINVNVVCPGFIASDMTAKLGEDMEKKILGTIP---------LGRTGQPENVAGLVEFLALS--P------AASYITG  233 (244)
T ss_dssp             TTTEEEEEEEECSBCSHHHHTTCHHHHHHHHTSCT---------TCSCBCHHHHHHHHHHHHHC--S------GGGGCCS
T ss_pred             hcCCEEEEEeeCccccchhhhcChHHHHHHhhcCC---------CCCCCCHHHHHHHHHHHhCC--C------ccCCcCC
Confidence            35799999999999987533322333333322211         13578999999999988741  0      0223568


Q ss_pred             ccEEecCCC
Q 017760          150 QPYFVSDGF  158 (366)
Q Consensus       150 ~~y~I~~~~  158 (366)
                      +.|++.+|.
T Consensus       234 ~~~~v~gG~  242 (244)
T 1edo_A          234 QAFTIDGGI  242 (244)
T ss_dssp             CEEEESTTT
T ss_pred             CEEEeCCCc
Confidence            899998874

>3op4_A 3-oxoacyl-[acyl-carrier protein] reductase; 3-ketoacyl-(acyl-carrier-protein) reductase; HET: MSE NAP; 1.60A {Vibrio cholerae o1 biovar el tor} SCOP: c.2.1.2 PDB: 3rsh_A* 3rro_A* 4i08_A* 3tzk_A 3tzc_A* 3u09_A 3tzh_A 1q7b_A* 1i01_A* 1q7c_A* 2cf2_E

Probab=98.72  E-value=3.8e-08  Score=88.72  Aligned_cols=133  Identities=16%  Similarity=0.117  Sum_probs=90.6

Q ss_pred             ccccCCeEEEEcCCChhHHHHHHHHHHcCCceEEEEecCCCCccc-ccccCCCeEEEEcc--------------------
Q 017760            7 EGIEGKTFLVTGGLGHVGSALCLELVRRGAYQVRAFDLRTNSPWS-HLLINHGVHCIQGL--------------------   65 (366)
Q Consensus         7 ~~~~~~~VlITGgtGfiG~~L~~~L~~~g~~~V~~~dr~~~~~~~-~~~~~~~v~~i~gD--------------------   65 (366)
                      +.+++++++||||+|.||+++++.|.++|+ +|++.+|+...... ..........+++|                    
T Consensus         5 ~~l~gk~~lVTGas~gIG~a~a~~l~~~G~-~V~~~~r~~~~~~~~~~~~~~~~~~~~~Dv~d~~~v~~~~~~~~~~~g~   83 (248)
T 3op4_A            5 MNLEGKVALVTGASRGIGKAIAELLAERGA-KVIGTATSESGAQAISDYLGDNGKGMALNVTNPESIEAVLKAITDEFGG   83 (248)
T ss_dssp             TCCTTCEEEESSCSSHHHHHHHHHHHHTTC-EEEEEESSHHHHHHHHHHHGGGEEEEECCTTCHHHHHHHHHHHHHHHCC
T ss_pred             cCCCCCEEEEeCCCCHHHHHHHHHHHHCCC-EEEEEeCCHHHHHHHHHHhcccceEEEEeCCCHHHHHHHHHHHHHHcCC
Confidence            345678999999999999999999999995 89999987532211 01112345666777                    


Q ss_pred             ---------------------------------------------------------------------------c----
Q 017760           66 ---------------------------------------------------------------------------R----   66 (366)
Q Consensus        66 ---------------------------------------------------------------------------k----   66 (366)
                                                                                                 |    
T Consensus        84 iD~lv~nAg~~~~~~~~~~~~~~~~~~~~vN~~g~~~~~~~~~~~m~~~~~g~iv~isS~~~~~~~~~~~~Y~asK~a~~  163 (248)
T 3op4_A           84 VDILVNNAGITRDNLLMRMKEEEWSDIMETNLTSIFRLSKAVLRGMMKKRQGRIINVGSVVGTMGNAGQANYAAAKAGVI  163 (248)
T ss_dssp             CSEEEECCCCCCCCCGGGCCHHHHHHHHHHHTHHHHHHHHHHHHHHHHHTCEEEEEECCHHHHHCCTTCHHHHHHHHHHH
T ss_pred             CCEEEECCCCCCCCChhhCCHHHHHHHHHHhhHHHHHHHHHHHHHHHHcCCCEEEEEcchhhcCCCCCChHHHHHHHHHH
Confidence                                                                                       0    


Q ss_pred             ----c----CCCCCceEEEEeCCccccCCCCCCHHHHHHHHHcCCCCeeecCCCcceeceeHHHHHHHHHHHHhccccCC
Q 017760           67 ----K----NNRKCLYTCAVRPAAIYGPGEERHLPRIVSLAKLGLVPFKIGEPSVKTDWIYVDNLVLALILASMGLLDDI  138 (366)
Q Consensus        67 ----s----~~~~~l~~~ilRp~~iyGp~~~~~l~~~i~~~~~g~~~~~~g~~~~~~~~v~vdDla~a~~~a~~~l~~~~  138 (366)
                          +    ....++++.+++|+.+..+......+..........         ....+.+.+|+++++..++..     
T Consensus       164 ~l~~~la~e~~~~gi~vn~v~PG~v~T~~~~~~~~~~~~~~~~~~---------p~~r~~~p~dva~~v~~L~s~-----  229 (248)
T 3op4_A          164 GFTKSMAREVASRGVTVNTVAPGFIETDMTKALNDEQRTATLAQV---------PAGRLGDPREIASAVAFLASP-----  229 (248)
T ss_dssp             HHHHHHHHHHGGGTEEEEEEEECSBSSTTTTTSCHHHHHHHHHTC---------TTCSCBCHHHHHHHHHHHHSG-----
T ss_pred             HHHHHHHHHHHHhCeEEEEEeeCCCCCchhhhcCHHHHHHHHhcC---------CCCCCcCHHHHHHHHHHHcCC-----
Confidence                0    234579999999999988765443333333333222         123577999999999887742     


Q ss_pred             CCCCCCCCCCCccEEecCCC
Q 017760          139 PGQKGRPIASGQPYFVSDGF  158 (366)
Q Consensus       139 ~~~~~~~~~~g~~y~I~~~~  158 (366)
                          ......|+.+++.+|.
T Consensus       230 ----~~~~itG~~i~vdgG~  245 (248)
T 3op4_A          230 ----EAAYITGETLHVNGGM  245 (248)
T ss_dssp             ----GGTTCCSCEEEESTTS
T ss_pred             ----ccCCccCcEEEECCCe
Confidence                1334569999998875

>1yxm_A Pecra, peroxisomal trans 2-enoyl COA reductase; perioxisomes, fatty acid synthesis, short-chain dehydrogenases/reductases, structural genomics; HET: ADE; 1.90A {Homo sapiens} SCOP: c.2.1.2

Probab=98.71  E-value=1.5e-08  Score=93.86  Aligned_cols=38  Identities=29%  Similarity=0.448  Sum_probs=34.3

Q ss_pred             cccCCeEEEEcCCChhHHHHHHHHHHcCCceEEEEecCC
Q 017760            8 GIEGKTFLVTGGLGHVGSALCLELVRRGAYQVRAFDLRT   46 (366)
Q Consensus         8 ~~~~~~VlITGgtGfiG~~L~~~L~~~g~~~V~~~dr~~   46 (366)
                      .+++++|+||||+|++|+++++.|+++|+ +|++++|+.
T Consensus        15 ~l~~k~vlVTGasggIG~~la~~l~~~G~-~V~~~~r~~   52 (303)
T 1yxm_A           15 LLQGQVAIVTGGATGIGKAIVKELLELGS-NVVIASRKL   52 (303)
T ss_dssp             TTTTCEEEEETTTSHHHHHHHHHHHHTTC-EEEEEESCH
T ss_pred             CCCCCEEEEECCCcHHHHHHHHHHHHCCC-EEEEEeCCH
Confidence            35678999999999999999999999995 899999875

>3gk3_A Acetoacetyl-COA reductase; acetoacetyl-CO reductase, oxidoreductase, structural genomics; 2.10A {Burkholderia pseudomallei 1710B}

Probab=98.71  E-value=3e-08  Score=90.41  Aligned_cols=57  Identities=21%  Similarity=0.183  Sum_probs=41.3

Q ss_pred             cccCCeEEEEcCCChhHHHHHHHHHHcCCceEEEEecCCCCcccc-----cccCCCeEEEEcc
Q 017760            8 GIEGKTFLVTGGLGHVGSALCLELVRRGAYQVRAFDLRTNSPWSH-----LLINHGVHCIQGL   65 (366)
Q Consensus         8 ~~~~~~VlITGgtGfiG~~L~~~L~~~g~~~V~~~dr~~~~~~~~-----~~~~~~v~~i~gD   65 (366)
                      ++++++++||||+|.||+++++.|+++|+ +|++.+++.......     .....++.++.+|
T Consensus        22 ~~~~k~vlITGas~gIG~~~a~~l~~~G~-~v~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~D   83 (269)
T 3gk3_A           22 MQAKRVAFVTGGMGGLGAAISRRLHDAGM-AVAVSHSERNDHVSTWLMHERDAGRDFKAYAVD   83 (269)
T ss_dssp             --CCCEEEETTTTSHHHHHHHHHHHTTTC-EEEEEECSCHHHHHHHHHHHHTTTCCCEEEECC
T ss_pred             hhcCCEEEEECCCchHHHHHHHHHHHCCC-EEEEEcCCchHHHHHHHHHHHhcCCceEEEEec
Confidence            34567899999999999999999999995 899998654322110     1113567888888

>3tl3_A Short-chain type dehydrogenase/reductase; ssgcid, seattle structural genomics center for infectious DI oxidoreductase; 1.85A {Mycobacterium ulcerans}

Probab=98.70  E-value=9.7e-08  Score=86.36  Aligned_cols=55  Identities=25%  Similarity=0.283  Sum_probs=38.8

Q ss_pred             cccCCeEEEEcCCChhHHHHHHHHHHcCCceEEEEecCCCCcccccccCCCeEEEEcc
Q 017760            8 GIEGKTFLVTGGLGHVGSALCLELVRRGAYQVRAFDLRTNSPWSHLLINHGVHCIQGL   65 (366)
Q Consensus         8 ~~~~~~VlITGgtGfiG~~L~~~L~~~g~~~V~~~dr~~~~~~~~~~~~~~v~~i~gD   65 (366)
                      .+++++++||||+|.||++++++|.++|+ +|++++++....  .......+.++++|
T Consensus         6 ~l~~k~vlVTGas~gIG~aia~~l~~~G~-~V~~~~r~~~~~--~~~~~~~~~~~~~D   60 (257)
T 3tl3_A            6 EIRDAVAVVTGGASGLGLATTKRLLDAGA-QVVVLDIRGEDV--VADLGDRARFAAAD   60 (257)
T ss_dssp             ----CEEEEETTTSHHHHHHHHHHHHHTC-EEEEEESSCHHH--HHHTCTTEEEEECC
T ss_pred             eecCCEEEEeCCCCHHHHHHHHHHHHCCC-EEEEEeCchHHH--HHhcCCceEEEECC
Confidence            45678999999999999999999999995 899999854211  11123456666666

>3ppi_A 3-hydroxyacyl-COA dehydrogenase type-2; ssgcid, dehydrogenas mycobacterium avium, structural genomics; 2.00A {Mycobacterium avium}

Probab=98.70  E-value=2.4e-08  Score=91.54  Aligned_cols=56  Identities=23%  Similarity=0.281  Sum_probs=40.6

Q ss_pred             ccCCeEEEEcCCChhHHHHHHHHHHcCCceEEEEecCCCCccc-ccccCCCeEEEEcc
Q 017760            9 IEGKTFLVTGGLGHVGSALCLELVRRGAYQVRAFDLRTNSPWS-HLLINHGVHCIQGL   65 (366)
Q Consensus         9 ~~~~~VlITGgtGfiG~~L~~~L~~~g~~~V~~~dr~~~~~~~-~~~~~~~v~~i~gD   65 (366)
                      +++++++||||+|.||+++++.|+++|+ +|++++|+...... .......+.++++|
T Consensus        28 l~~k~vlVTGas~GIG~aia~~l~~~G~-~Vi~~~r~~~~~~~~~~~~~~~~~~~~~D   84 (281)
T 3ppi_A           28 FEGASAIVSGGAGGLGEATVRRLHADGL-GVVIADLAAEKGKALADELGNRAEFVSTN   84 (281)
T ss_dssp             GTTEEEEEETTTSHHHHHHHHHHHHTTC-EEEEEESCHHHHHHHHHHHCTTEEEEECC
T ss_pred             cCCCEEEEECCCChHHHHHHHHHHHCCC-EEEEEeCChHHHHHHHHHhCCceEEEEcC
Confidence            4567899999999999999999999995 89999987532111 01112345666666

>3grp_A 3-oxoacyl-(acyl carrierprotein) reductase; structural genomics, oxidoreductase, S structural genomics center for infectious disease, ssgcid; 2.09A {Bartonella henselae} PDB: 3enn_A 3emk_A

Probab=98.70  E-value=2.1e-08  Score=91.53  Aligned_cols=56  Identities=23%  Similarity=0.300  Sum_probs=42.0

Q ss_pred             ccCCeEEEEcCCChhHHHHHHHHHHcCCceEEEEecCCCCccc-ccccCCCeEEEEcc
Q 017760            9 IEGKTFLVTGGLGHVGSALCLELVRRGAYQVRAFDLRTNSPWS-HLLINHGVHCIQGL   65 (366)
Q Consensus         9 ~~~~~VlITGgtGfiG~~L~~~L~~~g~~~V~~~dr~~~~~~~-~~~~~~~v~~i~gD   65 (366)
                      +++++++||||+|+||+++++.|+++|+ +|++.+++...... ......++.++++|
T Consensus        25 l~gk~vlVTGas~gIG~aia~~la~~G~-~V~~~~r~~~~~~~~~~~~~~~~~~~~~D   81 (266)
T 3grp_A           25 LTGRKALVTGATGGIGEAIARCFHAQGA-IVGLHGTREDKLKEIAADLGKDVFVFSAN   81 (266)
T ss_dssp             CTTCEEEESSTTSHHHHHHHHHHHHTTC-EEEEEESCHHHHHHHHHHHCSSEEEEECC
T ss_pred             cCCCEEEEeCCCcHHHHHHHHHHHHCCC-EEEEEeCCHHHHHHHHHHhCCceEEEEee
Confidence            4568999999999999999999999995 89999987532111 01113467777777

>3ijr_A Oxidoreductase, short chain dehydrogenase/reducta; structural genomics, infectious D center for structural genomics of infectious diseases; HET: NAD; 2.05A {Bacillus anthracis str} PDB: 3i3o_A*

Probab=98.69  E-value=2.1e-08  Score=92.69  Aligned_cols=56  Identities=21%  Similarity=0.322  Sum_probs=42.4

Q ss_pred             ccCCeEEEEcCCChhHHHHHHHHHHcCCceEEEEecCCCCccc--c---cccCCCeEEEEcc
Q 017760            9 IEGKTFLVTGGLGHVGSALCLELVRRGAYQVRAFDLRTNSPWS--H---LLINHGVHCIQGL   65 (366)
Q Consensus         9 ~~~~~VlITGgtGfiG~~L~~~L~~~g~~~V~~~dr~~~~~~~--~---~~~~~~v~~i~gD   65 (366)
                      +++++++||||+|.||+++++.|+++|+ +|++++++......  .   .....++.++++|
T Consensus        45 l~gk~vlVTGas~GIG~aia~~la~~G~-~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~D  105 (291)
T 3ijr_A           45 LKGKNVLITGGDSGIGRAVSIAFAKEGA-NIAIAYLDEEGDANETKQYVEKEGVKCVLLPGD  105 (291)
T ss_dssp             TTTCEEEEETTTSHHHHHHHHHHHHTTC-EEEEEESSCHHHHHHHHHHHHTTTCCEEEEESC
T ss_pred             CCCCEEEEeCCCcHHHHHHHHHHHHCCC-EEEEEeCCchHHHHHHHHHHHhcCCcEEEEECC
Confidence            4578999999999999999999999995 89999988642111  0   1113467777777

>3ezl_A Acetoacetyl-COA reductase; ssgcid, acetyacetyl-COA reductase, oxidoreductase, structural genomics; HET: P4C; 2.25A {Burkholderia pseudomallei 1710B} SCOP: c.2.1.0

Probab=98.69  E-value=2.6e-08  Score=89.94  Aligned_cols=135  Identities=15%  Similarity=0.161  Sum_probs=89.3

Q ss_pred             ccccCCeEEEEcCCChhHHHHHHHHHHcCCceEEEEecCCCCcccc---c--ccCCCeEEEEcc----------------
Q 017760            7 EGIEGKTFLVTGGLGHVGSALCLELVRRGAYQVRAFDLRTNSPWSH---L--LINHGVHCIQGL----------------   65 (366)
Q Consensus         7 ~~~~~~~VlITGgtGfiG~~L~~~L~~~g~~~V~~~dr~~~~~~~~---~--~~~~~v~~i~gD----------------   65 (366)
                      ...++++|+||||+|.+|++++++|+++|+ +|++.+++.......   .  ....++.++++|                
T Consensus         9 ~~~~~k~vlITGas~giG~~ia~~l~~~G~-~v~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~Dv~~~~~v~~~~~~~~~   87 (256)
T 3ezl_A            9 MVMSQRIAYVTGGMGGIGTSICQRLHKDGF-RVVAGCGPNSPRRVKWLEDQKALGFDFYASEGNVGDWDSTKQAFDKVKA   87 (256)
T ss_dssp             ----CEEEEETTTTSHHHHHHHHHHHHTTE-EEEEEECTTCSSHHHHHHHHHHTTCCCEEEECCTTCHHHHHHHHHHHHH
T ss_pred             CCCCCCEEEEECCCChHHHHHHHHHHHCCC-EEEEEeCCCHHHHHHHHHHHHhcCCeeEEEecCCCCHHHHHHHHHHHHH
Confidence            345678999999999999999999999994 899988554332111   1  113457777777                


Q ss_pred             -------------------------------------------------------------------------------c
Q 017760           66 -------------------------------------------------------------------------------R   66 (366)
Q Consensus        66 -------------------------------------------------------------------------------k   66 (366)
                                                                                                     |
T Consensus        88 ~~g~id~lv~~Ag~~~~~~~~~~~~~~~~~~~~vN~~g~~~l~~~~~~~~~~~~~g~iv~isS~~~~~~~~~~~~Y~asK  167 (256)
T 3ezl_A           88 EVGEIDVLVNNAGITRDVVFRKMTREDWQAVIDTNLTSLFNVTKQVIDGMVERGWGRIINISSVNGQKGQFGQTNYSTAK  167 (256)
T ss_dssp             HTCCEEEEEECCCCCCCCCTTTCCHHHHHHHHHHHTHHHHHHHHHHHHHHHHHTCEEEEEECCCCGGGSCSCCHHHHHHH
T ss_pred             hcCCCCEEEECCCCCCCCchhhCCHHHHHHHHHHHhHHHHHHHHHHHHHHHhcCCCEEEEEcchhhccCCCCCcccHHHH
Confidence                                                                                           0


Q ss_pred             ------------cCCCCCceEEEEeCCccccCCCCCCHHHHHHHHHcCCCCeeecCCCcceeceeHHHHHHHHHHHHhcc
Q 017760           67 ------------KNNRKCLYTCAVRPAAIYGPGEERHLPRIVSLAKLGLVPFKIGEPSVKTDWIYVDNLVLALILASMGL  134 (366)
Q Consensus        67 ------------s~~~~~l~~~ilRp~~iyGp~~~~~l~~~i~~~~~g~~~~~~g~~~~~~~~v~vdDla~a~~~a~~~l  134 (366)
                                  .....++++.+++|+.+..+......+.....+....+         ...+.+.+|+++++..++.. 
T Consensus       168 ~a~~~~~~~la~e~~~~gi~v~~v~PG~v~t~~~~~~~~~~~~~~~~~~~---------~~~~~~~~dva~~~~~l~s~-  237 (256)
T 3ezl_A          168 AGIHGFTMSLAQEVATKGVTVNTVSPGYIGTDMVKAIRPDVLEKIVATIP---------VRRLGSPDEIGSIVAWLASE-  237 (256)
T ss_dssp             HHHHHHHHHHHHHHGGGTEEEEEEEECSBCCHHHHTSCHHHHHHHHHHST---------TSSCBCHHHHHHHHHHHHSG-
T ss_pred             HHHHHHHHHHHHHHHHhCCEEEEEEECcccCccccccCHHHHHHHHhcCC---------CCCCcCHHHHHHHHHHHhCC-
Confidence                        02235788999999888776443333444444433322         13466899999999887742 


Q ss_pred             ccCCCCCCCCCCCCCccEEecCCCCC
Q 017760          135 LDDIPGQKGRPIASGQPYFVSDGFPI  160 (366)
Q Consensus       135 ~~~~~~~~~~~~~~g~~y~I~~~~~v  160 (366)
                              ......|+.+++.+|..+
T Consensus       238 --------~~~~~tG~~i~vdgG~~~  255 (256)
T 3ezl_A          238 --------ESGFSTGADFSLNGGLHM  255 (256)
T ss_dssp             --------GGTTCCSCEEEESTTSCC
T ss_pred             --------cccCCcCcEEEECCCEeC
Confidence                    134567999999888654

>4da9_A Short-chain dehydrogenase/reductase; structural genomics, protein structure initiative, PSI-biology; 2.50A {Sinorhizobium meliloti}

Probab=98.69  E-value=6.6e-08  Score=88.82  Aligned_cols=55  Identities=16%  Similarity=0.198  Sum_probs=40.4

Q ss_pred             cCCeEEEEcCCChhHHHHHHHHHHcCCceEEEEecCCCCccc---ccc--cCCCeEEEEcc
Q 017760           10 EGKTFLVTGGLGHVGSALCLELVRRGAYQVRAFDLRTNSPWS---HLL--INHGVHCIQGL   65 (366)
Q Consensus        10 ~~~~VlITGgtGfiG~~L~~~L~~~g~~~V~~~dr~~~~~~~---~~~--~~~~v~~i~gD   65 (366)
                      ++++++||||+|.||+++++.|+++|+ +|++++++......   ..+  ...++.++++|
T Consensus        28 ~~k~~lVTGas~GIG~aia~~la~~G~-~V~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~D   87 (280)
T 4da9_A           28 ARPVAIVTGGRRGIGLGIARALAASGF-DIAITGIGDAEGVAPVIAELSGLGARVIFLRAD   87 (280)
T ss_dssp             CCCEEEEETTTSHHHHHHHHHHHHTTC-EEEEEESCCHHHHHHHHHHHHHTTCCEEEEECC
T ss_pred             CCCEEEEecCCCHHHHHHHHHHHHCCC-eEEEEeCCCHHHHHHHHHHHHhcCCcEEEEEec
Confidence            457899999999999999999999995 89999975432110   011  12456777777

>1gee_A Glucose 1-dehydrogenase; short-chain dehydrogenase/reductase, oxidoreductase; HET: NAD; 1.60A {Bacillus megaterium} SCOP: c.2.1.2 PDB: 1rwb_A* 1gco_A* 1g6k_A* 3aus_A 3aut_A* 3auu_A*

Probab=98.69  E-value=1.9e-08  Score=91.07  Aligned_cols=35  Identities=23%  Similarity=0.389  Sum_probs=32.5

Q ss_pred             ccCCeEEEEcCCChhHHHHHHHHHHcCCceEEEEec
Q 017760            9 IEGKTFLVTGGLGHVGSALCLELVRRGAYQVRAFDL   44 (366)
Q Consensus         9 ~~~~~VlITGgtGfiG~~L~~~L~~~g~~~V~~~dr   44 (366)
                      +++++|+||||+|++|++++++|+++|+ +|++++|
T Consensus         5 l~~k~vlITGasggiG~~~a~~l~~~G~-~V~~~~r   39 (261)
T 1gee_A            5 LEGKVVVITGSSTGLGKSMAIRFATEKA-KVVVNYR   39 (261)
T ss_dssp             GTTCEEEETTCSSHHHHHHHHHHHHTTC-EEEEEES
T ss_pred             CCCCEEEEeCCCChHHHHHHHHHHHCCC-EEEEEcC
Confidence            5578999999999999999999999995 8999998

>3uxy_A Short-chain dehydrogenase/reductase SDR; structural genomics, PSI-biology, NEW YORK structural genomi research consortium, nysgrc; HET: NAD; 2.10A {Rhodobacter sphaeroides}

Probab=98.69  E-value=4.1e-08  Score=89.55  Aligned_cols=40  Identities=40%  Similarity=0.556  Sum_probs=34.8

Q ss_pred             cccCCeEEEEcCCChhHHHHHHHHHHcCCceEEEEecCCCC
Q 017760            8 GIEGKTFLVTGGLGHVGSALCLELVRRGAYQVRAFDLRTNS   48 (366)
Q Consensus         8 ~~~~~~VlITGgtGfiG~~L~~~L~~~g~~~V~~~dr~~~~   48 (366)
                      .+++++++||||+|.||+++++.|+++|+ +|++.+|+...
T Consensus        25 ~l~gk~vlVTGas~gIG~aia~~la~~G~-~V~~~~r~~~~   64 (266)
T 3uxy_A           25 GFEGKVALVTGAAGGIGGAVVTALRAAGA-RVAVADRAVAG   64 (266)
T ss_dssp             -CTTCEEEESSTTSHHHHHHHHHHHHTTC-EEEECSSCCTT
T ss_pred             CCCCCEEEEeCCCcHHHHHHHHHHHHCCC-EEEEEeCCHHH
Confidence            34578999999999999999999999995 89999987643

>1zk4_A R-specific alcohol dehydrogenase; short chain reductases/dehydrogenases, magnesium dependence, oxidoreductase; HET: NAP; 1.00A {Lactobacillus brevis} SCOP: c.2.1.2 PDB: 1nxq_A* 1zjy_A* 1zjz_A* 1zk0_A* 1zk1_A* 1zk2_A 1zk3_A

Probab=98.68  E-value=1.1e-08  Score=91.89  Aligned_cols=38  Identities=29%  Similarity=0.484  Sum_probs=34.3

Q ss_pred             cccCCeEEEEcCCChhHHHHHHHHHHcCCceEEEEecCC
Q 017760            8 GIEGKTFLVTGGLGHVGSALCLELVRRGAYQVRAFDLRT   46 (366)
Q Consensus         8 ~~~~~~VlITGgtGfiG~~L~~~L~~~g~~~V~~~dr~~   46 (366)
                      .+++++++||||+|++|+++++.|+++|+ +|++++|++
T Consensus         3 ~~~~k~vlVtGasggiG~~~a~~l~~~G~-~V~~~~r~~   40 (251)
T 1zk4_A            3 RLDGKVAIITGGTLGIGLAIATKFVEEGA-KVMITGRHS   40 (251)
T ss_dssp             TTTTCEEEETTTTSHHHHHHHHHHHHTTC-EEEEEESCH
T ss_pred             CCCCcEEEEeCCCChHHHHHHHHHHHCCC-EEEEEeCCH
Confidence            35678999999999999999999999995 899999875

>2ag5_A DHRS6, dehydrogenase/reductase (SDR family) member 6; protein-CO-factor complex, structural genomics, structural G consortium, SGC, oxidoreductase; HET: NAD; 1.84A {Homo sapiens} SCOP: c.2.1.2

Probab=98.68  E-value=2.7e-08  Score=89.42  Aligned_cols=55  Identities=24%  Similarity=0.292  Sum_probs=40.6

Q ss_pred             ccCCeEEEEcCCChhHHHHHHHHHHcCCceEEEEecCCCCcccccccCCCeEEEEcc
Q 017760            9 IEGKTFLVTGGLGHVGSALCLELVRRGAYQVRAFDLRTNSPWSHLLINHGVHCIQGL   65 (366)
Q Consensus         9 ~~~~~VlITGgtGfiG~~L~~~L~~~g~~~V~~~dr~~~~~~~~~~~~~~v~~i~gD   65 (366)
                      +++++++||||+|++|+++++.|+++|+ +|++++|++....... ...++.++++|
T Consensus         4 l~~k~vlVTGas~gIG~~ia~~l~~~G~-~V~~~~r~~~~~~~~~-~~~~~~~~~~D   58 (246)
T 2ag5_A            4 LDGKVIILTAAAQGIGQAAALAFAREGA-KVIATDINESKLQELE-KYPGIQTRVLD   58 (246)
T ss_dssp             TTTCEEEESSTTSHHHHHHHHHHHHTTC-EEEEEESCHHHHGGGG-GSTTEEEEECC
T ss_pred             CCCCEEEEeCCCcHHHHHHHHHHHHCCC-EEEEEECCHHHHHHHH-hccCceEEEee
Confidence            4678999999999999999999999995 8999998753211111 11245666666

>3imf_A Short chain dehydrogenase; structural genomics, infectious D center for structural genomics of infectious diseases, oxidoreductase, csgid; HET: MSE; 1.99A {Bacillus anthracis str}

Probab=98.68  E-value=1.4e-08  Score=91.98  Aligned_cols=57  Identities=16%  Similarity=0.222  Sum_probs=43.4

Q ss_pred             cccCCeEEEEcCCChhHHHHHHHHHHcCCceEEEEecCCCCccc--ccc--cCCCeEEEEcc
Q 017760            8 GIEGKTFLVTGGLGHVGSALCLELVRRGAYQVRAFDLRTNSPWS--HLL--INHGVHCIQGL   65 (366)
Q Consensus         8 ~~~~~~VlITGgtGfiG~~L~~~L~~~g~~~V~~~dr~~~~~~~--~~~--~~~~v~~i~gD   65 (366)
                      .+++++++||||+|.||.++++.|.++|+ +|++++|+......  ..+  ...++.++++|
T Consensus         3 ~l~~k~vlVTGas~gIG~aia~~l~~~G~-~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~D   63 (257)
T 3imf_A            3 AMKEKVVIITGGSSGMGKGMATRFAKEGA-RVVITGRTKEKLEEAKLEIEQFPGQILTVQMD   63 (257)
T ss_dssp             TTTTCEEEETTTTSHHHHHHHHHHHHTTC-EEEEEESCHHHHHHHHHHHCCSTTCEEEEECC
T ss_pred             CCCCCEEEEECCCCHHHHHHHHHHHHCCC-EEEEEeCCHHHHHHHHHHHHhcCCcEEEEEcc
Confidence            46678999999999999999999999995 89999987532211  111  13467778888

>4eso_A Putative oxidoreductase; NADP, structural genomics, PSI-biology, NEW structural genomics research consortium, nysgrc; HET: MSE NAP; 1.91A {Sinorhizobium meliloti} PDB: 3vc7_A

Probab=98.68  E-value=4.2e-08  Score=88.80  Aligned_cols=56  Identities=25%  Similarity=0.254  Sum_probs=41.8

Q ss_pred             ccCCeEEEEcCCChhHHHHHHHHHHcCCceEEEEecCCCCccc-ccccCCCeEEEEcc
Q 017760            9 IEGKTFLVTGGLGHVGSALCLELVRRGAYQVRAFDLRTNSPWS-HLLINHGVHCIQGL   65 (366)
Q Consensus         9 ~~~~~VlITGgtGfiG~~L~~~L~~~g~~~V~~~dr~~~~~~~-~~~~~~~v~~i~gD   65 (366)
                      +++++++||||+|.||+++++.|.++|+ +|++.+|+...... ......++.++++|
T Consensus         6 l~gk~~lVTGas~gIG~a~a~~l~~~G~-~V~~~~r~~~~~~~~~~~~~~~~~~~~~D   62 (255)
T 4eso_A            6 YQGKKAIVIGGTHGMGLATVRRLVEGGA-EVLLTGRNESNIARIREEFGPRVHALRSD   62 (255)
T ss_dssp             TTTCEEEEETCSSHHHHHHHHHHHHTTC-EEEEEESCHHHHHHHHHHHGGGEEEEECC
T ss_pred             CCCCEEEEECCCCHHHHHHHHHHHHCCC-EEEEEeCCHHHHHHHHHHhCCcceEEEcc
Confidence            4568999999999999999999999995 89999987532111 00112456777777

>3o38_A Short chain dehydrogenase; tuberculosis, ortholog from A non-pathogenic dehydrogenase, structural genomics; 1.95A {Mycobacterium smegmatis}

Probab=98.68  E-value=4.5e-08  Score=88.92  Aligned_cols=56  Identities=25%  Similarity=0.216  Sum_probs=42.7

Q ss_pred             ccCCeEEEEcCCCh-hHHHHHHHHHHcCCceEEEEecCCCCccc--c---cccCCCeEEEEcc
Q 017760            9 IEGKTFLVTGGLGH-VGSALCLELVRRGAYQVRAFDLRTNSPWS--H---LLINHGVHCIQGL   65 (366)
Q Consensus         9 ~~~~~VlITGgtGf-iG~~L~~~L~~~g~~~V~~~dr~~~~~~~--~---~~~~~~v~~i~gD   65 (366)
                      +++++++||||+|+ ||++++++|+++|+ +|++++|+......  .   .....++.++++|
T Consensus        20 l~~k~vlITGasg~GIG~~~a~~l~~~G~-~V~~~~r~~~~~~~~~~~l~~~~~~~~~~~~~D   81 (266)
T 3o38_A           20 LKGKVVLVTAAAGTGIGSTTARRALLEGA-DVVISDYHERRLGETRDQLADLGLGRVEAVVCD   81 (266)
T ss_dssp             TTTCEEEESSCSSSSHHHHHHHHHHHTTC-EEEEEESCHHHHHHHHHHHHTTCSSCEEEEECC
T ss_pred             CCCCEEEEECCCCCchHHHHHHHHHHCCC-EEEEecCCHHHHHHHHHHHHhcCCCceEEEEeC
Confidence            56789999999985 99999999999995 89999987543211  1   1112568888888

>2a4k_A 3-oxoacyl-[acyl carrier protein] reductase; reductase,hyperthermophIle, structural genomics, PSI, protei structure initiative; 2.30A {Thermus thermophilus} SCOP: c.2.1.2

Probab=98.68  E-value=1e-07  Score=86.71  Aligned_cols=56  Identities=25%  Similarity=0.250  Sum_probs=41.0

Q ss_pred             ccCCeEEEEcCCChhHHHHHHHHHHcCCceEEEEecCCCCccc-ccccCCCeEEEEcc
Q 017760            9 IEGKTFLVTGGLGHVGSALCLELVRRGAYQVRAFDLRTNSPWS-HLLINHGVHCIQGL   65 (366)
Q Consensus         9 ~~~~~VlITGgtGfiG~~L~~~L~~~g~~~V~~~dr~~~~~~~-~~~~~~~v~~i~gD   65 (366)
                      +++++++||||+|.+|+++++.|.++|+ +|++++|+...... ......++.++++|
T Consensus         4 l~~k~vlITGas~gIG~aia~~l~~~G~-~V~~~~r~~~~~~~~~~~~~~~~~~~~~D   60 (263)
T 2a4k_A            4 LSGKTILVTGAASGIGRAALDLFAREGA-SLVAVDREERLLAEAVAALEAEAIAVVAD   60 (263)
T ss_dssp             TTTCEEEEESTTSHHHHHHHHHHHHTTC-EEEEEESCHHHHHHHHHTCCSSEEEEECC
T ss_pred             CCCCEEEEECCCCHHHHHHHHHHHHCCC-EEEEEeCCHHHHHHHHHHhcCceEEEEcC
Confidence            5668999999999999999999999995 89999987532110 00011356666666

>2o23_A HADH2 protein; HSD17B10, schad, ERAB, type II HADH, 2-methyl-3-hydroxybuTyr dehydrogenase, MHBD, structural genomics, structural genomi consortium; HET: NAD GOL; 1.20A {Homo sapiens} SCOP: c.2.1.2 PDB: 1so8_A 1u7t_A* 1e3s_A* 1e3w_B* 1e3w_A* 1e6w_A*

Probab=98.67  E-value=1.1e-07  Score=85.94  Aligned_cols=39  Identities=31%  Similarity=0.480  Sum_probs=35.1

Q ss_pred             cccCCeEEEEcCCChhHHHHHHHHHHcCCceEEEEecCCC
Q 017760            8 GIEGKTFLVTGGLGHVGSALCLELVRRGAYQVRAFDLRTN   47 (366)
Q Consensus         8 ~~~~~~VlITGgtGfiG~~L~~~L~~~g~~~V~~~dr~~~   47 (366)
                      .+++++++||||+|++|+++++.|+++|+ +|++++|+..
T Consensus         9 ~~~~k~vlVTGasggiG~~~a~~l~~~G~-~V~~~~r~~~   47 (265)
T 2o23_A            9 SVKGLVAVITGGASGLGLATAERLVGQGA-SAVLLDLPNS   47 (265)
T ss_dssp             CCTTCEEEEETTTSHHHHHHHHHHHHTTC-EEEEEECTTS
T ss_pred             CCCCCEEEEECCCChHHHHHHHHHHHCCC-EEEEEeCCcH
Confidence            35678999999999999999999999995 8999999864

>4dmm_A 3-oxoacyl-[acyl-carrier-protein] reductase; rossmann fold, oxoacyl-ACP reductase, NADP binding, fatty AC biosynthsis, oxidoreductase; HET: NAP; 2.38A {Synechococcus elongatus} PDB: 4dml_A*

Probab=98.67  E-value=2.7e-08  Score=90.83  Aligned_cols=56  Identities=21%  Similarity=0.272  Sum_probs=41.6

Q ss_pred             ccCCeEEEEcCCChhHHHHHHHHHHcCCceEEEEecCCCCccc---ccc--cCCCeEEEEcc
Q 017760            9 IEGKTFLVTGGLGHVGSALCLELVRRGAYQVRAFDLRTNSPWS---HLL--INHGVHCIQGL   65 (366)
Q Consensus         9 ~~~~~VlITGgtGfiG~~L~~~L~~~g~~~V~~~dr~~~~~~~---~~~--~~~~v~~i~gD   65 (366)
                      +++++++||||+|.||+++++.|+++|+ +|++.+++......   ..+  ....+.++++|
T Consensus        26 l~~k~vlVTGas~gIG~aia~~la~~G~-~V~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~D   86 (269)
T 4dmm_A           26 LTDRIALVTGASRGIGRAIALELAAAGA-KVAVNYASSAGAADEVVAAIAAAGGEAFAVKAD   86 (269)
T ss_dssp             TTTCEEEETTCSSHHHHHHHHHHHHTTC-EEEEEESSCHHHHHHHHHHHHHTTCCEEEEECC
T ss_pred             CCCCEEEEECCCCHHHHHHHHHHHHCCC-EEEEEeCCChHHHHHHHHHHHhcCCcEEEEECC
Confidence            3468899999999999999999999995 89999885432111   011  13467778888

>3ftp_A 3-oxoacyl-[acyl-carrier protein] reductase; ssgcid, 3-ketoacyl-(acyl-carrier- protein) reductase, oxidoreductase, structural genomics; 2.05A {Burkholderia pseudomallei}

Probab=98.67  E-value=2.5e-08  Score=91.15  Aligned_cols=56  Identities=23%  Similarity=0.214  Sum_probs=41.2

Q ss_pred             ccCCeEEEEcCCChhHHHHHHHHHHcCCceEEEEecCCCCccc--ccc--cCCCeEEEEcc
Q 017760            9 IEGKTFLVTGGLGHVGSALCLELVRRGAYQVRAFDLRTNSPWS--HLL--INHGVHCIQGL   65 (366)
Q Consensus         9 ~~~~~VlITGgtGfiG~~L~~~L~~~g~~~V~~~dr~~~~~~~--~~~--~~~~v~~i~gD   65 (366)
                      +++++++||||+|.||+++++.|+++|+ +|++++|+......  ..+  ...++..+.+|
T Consensus        26 l~~k~~lVTGas~GIG~aia~~la~~G~-~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~D   85 (270)
T 3ftp_A           26 LDKQVAIVTGASRGIGRAIALELARRGA-MVIGTATTEAGAEGIGAAFKQAGLEGRGAVLN   85 (270)
T ss_dssp             TTTCEEEETTCSSHHHHHHHHHHHHTTC-EEEEEESSHHHHHHHHHHHHHHTCCCEEEECC
T ss_pred             CCCCEEEEECCCCHHHHHHHHHHHHCCC-EEEEEeCCHHHHHHHHHHHHhcCCcEEEEEEe
Confidence            4568899999999999999999999995 89999987532111  000  12356667777

>2fwm_X 2,3-dihydro-2,3-dihydroxybenzoate dehydrogenase; enterobactin, rossman fold, chorismate metabolism, short-CHA oxidoreductase, tetramer; 2.00A {Escherichia coli}

Probab=98.67  E-value=1.3e-07  Score=85.28  Aligned_cols=38  Identities=37%  Similarity=0.506  Sum_probs=34.5

Q ss_pred             ccCCeEEEEcCCChhHHHHHHHHHHcCCceEEEEecCCC
Q 017760            9 IEGKTFLVTGGLGHVGSALCLELVRRGAYQVRAFDLRTN   47 (366)
Q Consensus         9 ~~~~~VlITGgtGfiG~~L~~~L~~~g~~~V~~~dr~~~   47 (366)
                      +++++++||||+|.+|+++++.|+++|+ +|++++|+..
T Consensus         5 l~~k~vlVTGas~giG~~ia~~l~~~G~-~V~~~~r~~~   42 (250)
T 2fwm_X            5 FSGKNVWVTGAGKGIGYATALAFVEAGA-KVTGFDQAFT   42 (250)
T ss_dssp             CTTCEEEEESTTSHHHHHHHHHHHHTTC-EEEEEESCCC
T ss_pred             CCCCEEEEeCCCcHHHHHHHHHHHHCCC-EEEEEeCchh
Confidence            5668999999999999999999999995 8999999764

>4iin_A 3-ketoacyl-acyl carrier protein reductase (FABG); structural genomics, center for structural genomics of infec diseases, csgid; HET: NAD; 2.40A {Helicobacter pylori} PDB: 4ijk_A

Probab=98.66  E-value=4.7e-08  Score=89.19  Aligned_cols=57  Identities=18%  Similarity=0.106  Sum_probs=42.6

Q ss_pred             cccCCeEEEEcCCChhHHHHHHHHHHcCCceEEEEecCCCCccc---cc--ccCCCeEEEEcc
Q 017760            8 GIEGKTFLVTGGLGHVGSALCLELVRRGAYQVRAFDLRTNSPWS---HL--LINHGVHCIQGL   65 (366)
Q Consensus         8 ~~~~~~VlITGgtGfiG~~L~~~L~~~g~~~V~~~dr~~~~~~~---~~--~~~~~v~~i~gD   65 (366)
                      .+++++|+||||+|.||++++++|+++|+ +|++++|+......   ..  ....++.++++|
T Consensus        26 ~l~~k~vlITGas~gIG~~la~~l~~~G~-~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~D   87 (271)
T 4iin_A           26 QFTGKNVLITGASKGIGAEIAKTLASMGL-KVWINYRSNAEVADALKNELEEKGYKAAVIKFD   87 (271)
T ss_dssp             CCSCCEEEETTCSSHHHHHHHHHHHHTTC-EEEEEESSCHHHHHHHHHHHHHTTCCEEEEECC
T ss_pred             ccCCCEEEEECCCcHHHHHHHHHHHHCCC-EEEEEeCCCHHHHHHHHHHHHhcCCceEEEECC
Confidence            35678999999999999999999999996 89999986432211   00  113467778877

>2zat_A Dehydrogenase/reductase SDR family member 4; alpha/beta, oxidoreductase; HET: NAP; 1.50A {Sus scrofa} PDB: 3o4r_A*

Probab=98.66  E-value=1.5e-08  Score=91.84  Aligned_cols=38  Identities=29%  Similarity=0.361  Sum_probs=34.3

Q ss_pred             cccCCeEEEEcCCChhHHHHHHHHHHcCCceEEEEecCC
Q 017760            8 GIEGKTFLVTGGLGHVGSALCLELVRRGAYQVRAFDLRT   46 (366)
Q Consensus         8 ~~~~~~VlITGgtGfiG~~L~~~L~~~g~~~V~~~dr~~   46 (366)
                      .+++++++||||+|++|+++++.|+++|+ +|++++|+.
T Consensus        11 ~l~~k~vlVTGas~gIG~~ia~~l~~~G~-~V~~~~r~~   48 (260)
T 2zat_A           11 PLENKVALVTASTDGIGLAIARRLAQDGA-HVVVSSRKQ   48 (260)
T ss_dssp             TTTTCEEEESSCSSHHHHHHHHHHHHTTC-EEEEEESCH
T ss_pred             CCCCCEEEEECCCcHHHHHHHHHHHHCCC-EEEEEeCCH
Confidence            35678999999999999999999999995 899999875

>3pgx_A Carveol dehydrogenase; structural genomics, seattle structural genomics center for infectious disease, ssgcid; HET: NAD; 1.85A {Mycobacterium avium} SCOP: c.2.1.0

Probab=98.65  E-value=1.7e-07  Score=85.95  Aligned_cols=38  Identities=24%  Similarity=0.455  Sum_probs=34.0

Q ss_pred             cccCCeEEEEcCCChhHHHHHHHHHHcCCceEEEEecCC
Q 017760            8 GIEGKTFLVTGGLGHVGSALCLELVRRGAYQVRAFDLRT   46 (366)
Q Consensus         8 ~~~~~~VlITGgtGfiG~~L~~~L~~~g~~~V~~~dr~~   46 (366)
                      .+++++++||||+|.||+++++.|+++|+ +|++++|+.
T Consensus        12 ~l~gk~~lVTGas~gIG~a~a~~la~~G~-~V~~~~r~~   49 (280)
T 3pgx_A           12 SLQGRVAFITGAARGQGRSHAVRLAAEGA-DIIACDICA   49 (280)
T ss_dssp             TTTTCEEEEESTTSHHHHHHHHHHHHTTC-EEEEEECCS
T ss_pred             ccCCCEEEEECCCcHHHHHHHHHHHHCCC-EEEEEeccc
Confidence            35678999999999999999999999995 899999853

>1yde_A Retinal dehydrogenase/reductase 3; oxidoreductase, structural genomics, structural genomics CON SGC; 2.40A {Homo sapiens} SCOP: c.2.1.2

Probab=98.65  E-value=1e-07  Score=86.96  Aligned_cols=38  Identities=32%  Similarity=0.459  Sum_probs=34.4

Q ss_pred             cccCCeEEEEcCCChhHHHHHHHHHHcCCceEEEEecCC
Q 017760            8 GIEGKTFLVTGGLGHVGSALCLELVRRGAYQVRAFDLRT   46 (366)
Q Consensus         8 ~~~~~~VlITGgtGfiG~~L~~~L~~~g~~~V~~~dr~~   46 (366)
                      .+++++++||||+|++|+++++.|+++|+ +|++++|++
T Consensus         6 ~l~~k~vlVTGas~gIG~~ia~~l~~~G~-~V~~~~r~~   43 (270)
T 1yde_A            6 RYAGKVVVVTGGGRGIGAGIVRAFVNSGA-RVVICDKDE   43 (270)
T ss_dssp             TTTTCEEEEETCSSHHHHHHHHHHHHTTC-EEEEEESCH
T ss_pred             CCCCCEEEEECCCcHHHHHHHHHHHHCCC-EEEEEeCCH
Confidence            35678999999999999999999999995 899999875

>2dtx_A Glucose 1-dehydrogenase related protein; rossmann fold, oxidoreductase; HET: BMA; 1.60A {Thermoplasma acidophilum} PDB: 2dtd_A* 2dte_A* 2zk7_A

Probab=98.65  E-value=8.7e-08  Score=87.20  Aligned_cols=39  Identities=23%  Similarity=0.420  Sum_probs=34.8

Q ss_pred             ccCCeEEEEcCCChhHHHHHHHHHHcCCceEEEEecCCCC
Q 017760            9 IEGKTFLVTGGLGHVGSALCLELVRRGAYQVRAFDLRTNS   48 (366)
Q Consensus         9 ~~~~~VlITGgtGfiG~~L~~~L~~~g~~~V~~~dr~~~~   48 (366)
                      +++++++||||+|+||+++++.|+++|+ +|++++|++..
T Consensus         6 l~~k~vlVTGas~gIG~~ia~~l~~~G~-~V~~~~r~~~~   44 (264)
T 2dtx_A            6 LRDKVVIVTGASMGIGRAIAERFVDEGS-KVIDLSIHDPG   44 (264)
T ss_dssp             GTTCEEEEESCSSHHHHHHHHHHHHTTC-EEEEEESSCCC
T ss_pred             cCCCEEEEeCCCCHHHHHHHHHHHHCCC-EEEEEecCccc
Confidence            4568999999999999999999999995 89999998643

>2nm0_A Probable 3-oxacyl-(acyl-carrier-protein) reductas; oxidoreductase; 1.99A {Streptomyces coelicolor}

Probab=98.65  E-value=2.7e-07  Score=83.40  Aligned_cols=38  Identities=24%  Similarity=0.288  Sum_probs=33.7

Q ss_pred             ccCCeEEEEcCCChhHHHHHHHHHHcCCceEEEEecCCC
Q 017760            9 IEGKTFLVTGGLGHVGSALCLELVRRGAYQVRAFDLRTN   47 (366)
Q Consensus         9 ~~~~~VlITGgtGfiG~~L~~~L~~~g~~~V~~~dr~~~   47 (366)
                      +++++++||||+|.+|+++++.|+++|+ +|++++|++.
T Consensus        19 l~~k~vlVTGas~gIG~aia~~l~~~G~-~V~~~~r~~~   56 (253)
T 2nm0_A           19 HMSRSVLVTGGNRGIGLAIARAFADAGD-KVAITYRSGE   56 (253)
T ss_dssp             -CCCEEEEETTTSHHHHHHHHHHHHTTC-EEEEEESSSC
T ss_pred             CCCCEEEEeCCCCHHHHHHHHHHHHCCC-EEEEEeCChH
Confidence            4568999999999999999999999995 8999998754

>1x1t_A D(-)-3-hydroxybutyrate dehydrogenase; NAD, NADH, SDR, short chain dehydrogenase, ketone BODY, beta hydroxybutyrate, oxidoreductase; HET: NAD; 1.52A {Pseudomonas fragi} SCOP: c.2.1.2 PDB: 1wmb_A* 2ztl_A* 2ztv_A* 2ztm_A* 2ztu_A* 2yz7_A 2zea_A* 3eew_A* 3vdq_A* 3vdr_A*

Probab=98.65  E-value=3.5e-08  Score=89.48  Aligned_cols=38  Identities=24%  Similarity=0.409  Sum_probs=34.2

Q ss_pred             ccCCeEEEEcCCChhHHHHHHHHHHcCCceEEEEecCCC
Q 017760            9 IEGKTFLVTGGLGHVGSALCLELVRRGAYQVRAFDLRTN   47 (366)
Q Consensus         9 ~~~~~VlITGgtGfiG~~L~~~L~~~g~~~V~~~dr~~~   47 (366)
                      +++++++||||+|+||+++++.|+++|+ +|++++|++.
T Consensus         2 l~~k~vlVTGas~gIG~~ia~~l~~~G~-~V~~~~r~~~   39 (260)
T 1x1t_A            2 LKGKVAVVTGSTSGIGLGIATALAAQGA-DIVLNGFGDA   39 (260)
T ss_dssp             CTTCEEEETTCSSHHHHHHHHHHHHTTC-EEEEECCSCH
T ss_pred             CCCCEEEEeCCCcHHHHHHHHHHHHcCC-EEEEEeCCcc
Confidence            4568999999999999999999999995 8999998764

>3ucx_A Short chain dehydrogenase; ssgcid, seattle structural genomics center for infectious DI dehydrogenase, oxidoreductase; HET: 1PE; 1.85A {Mycobacterium smegmatis} SCOP: c.2.1.0

Probab=98.64  E-value=4.7e-08  Score=88.88  Aligned_cols=57  Identities=11%  Similarity=0.072  Sum_probs=42.8

Q ss_pred             cccCCeEEEEcCCChhHHHHHHHHHHcCCceEEEEecCCCCccc--ccc--cCCCeEEEEcc
Q 017760            8 GIEGKTFLVTGGLGHVGSALCLELVRRGAYQVRAFDLRTNSPWS--HLL--INHGVHCIQGL   65 (366)
Q Consensus         8 ~~~~~~VlITGgtGfiG~~L~~~L~~~g~~~V~~~dr~~~~~~~--~~~--~~~~v~~i~gD   65 (366)
                      .+++++++||||+|.||+++++.|.++|+ +|++.+|+......  ..+  ...++.++++|
T Consensus         8 ~l~~k~vlVTGas~gIG~aia~~l~~~G~-~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~D   68 (264)
T 3ucx_A            8 LLTDKVVVISGVGPALGTTLARRCAEQGA-DLVLAARTVERLEDVAKQVTDTGRRALSVGTD   68 (264)
T ss_dssp             TTTTCEEEEESCCTTHHHHHHHHHHHTTC-EEEEEESCHHHHHHHHHHHHHTTCCEEEEECC
T ss_pred             CcCCcEEEEECCCcHHHHHHHHHHHHCcC-EEEEEeCCHHHHHHHHHHHHhcCCcEEEEEcC
Confidence            35678999999999999999999999995 89999987532111  111  13467777777

>2uvd_A 3-oxoacyl-(acyl-carrier-protein) reductase; beta-ketoacyl- (acyl carrier protein) reductase, short-chain dehydrogenase/reductase (SDR); 2.4A {Bacillus anthracis}

Probab=98.64  E-value=8.3e-08  Score=86.23  Aligned_cols=36  Identities=33%  Similarity=0.520  Sum_probs=32.7

Q ss_pred             ccCCeEEEEcCCChhHHHHHHHHHHcCCceEEEEecC
Q 017760            9 IEGKTFLVTGGLGHVGSALCLELVRRGAYQVRAFDLR   45 (366)
Q Consensus         9 ~~~~~VlITGgtGfiG~~L~~~L~~~g~~~V~~~dr~   45 (366)
                      +++++++||||+|++|+++++.|+++|+ +|++++|+
T Consensus         2 l~~k~vlVTGas~giG~~ia~~l~~~G~-~V~~~~r~   37 (246)
T 2uvd_A            2 LKGKVALVTGASRGIGRAIAIDLAKQGA-NVVVNYAG   37 (246)
T ss_dssp             CTTCEEEETTCSSHHHHHHHHHHHHTTC-EEEEEESS
T ss_pred             CCCCEEEEECCCcHHHHHHHHHHHHCCC-EEEEEeCC
Confidence            4568999999999999999999999995 89999984

>3uf0_A Short-chain dehydrogenase/reductase SDR; gluconate, gluconate 5-dehydratase, NAD(P) dependent, enzyme initiative, EFI, oxidoreductase; HET: NAP; 2.00A {Beutenbergia cavernae} SCOP: c.2.1.0

Probab=98.63  E-value=2.8e-08  Score=90.98  Aligned_cols=56  Identities=21%  Similarity=0.248  Sum_probs=40.8

Q ss_pred             ccCCeEEEEcCCChhHHHHHHHHHHcCCceEEEEecCCCCccc-ccc--cCCCeEEEEcc
Q 017760            9 IEGKTFLVTGGLGHVGSALCLELVRRGAYQVRAFDLRTNSPWS-HLL--INHGVHCIQGL   65 (366)
Q Consensus         9 ~~~~~VlITGgtGfiG~~L~~~L~~~g~~~V~~~dr~~~~~~~-~~~--~~~~v~~i~gD   65 (366)
                      +++++++||||+|.||+++++.|++.|+ +|+++++....... ..+  ....+.++++|
T Consensus        29 l~gk~~lVTGas~GIG~aia~~la~~G~-~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~D   87 (273)
T 3uf0_A           29 LAGRTAVVTGAGSGIGRAIAHGYARAGA-HVLAWGRTDGVKEVADEIADGGGSAEAVVAD   87 (273)
T ss_dssp             CTTCEEEEETTTSHHHHHHHHHHHHTTC-EEEEEESSTHHHHHHHHHHTTTCEEEEEECC
T ss_pred             CCCCEEEEeCCCcHHHHHHHHHHHHCCC-EEEEEcCHHHHHHHHHHHHhcCCcEEEEEec
Confidence            4578999999999999999999999996 89999965321111 111  12456777777

>2z1n_A Dehydrogenase; reductase, SDR, oxidoreductase; 1.80A {Aeropyrum pernix}

Probab=98.63  E-value=6.1e-08  Score=87.85  Aligned_cols=37  Identities=41%  Similarity=0.550  Sum_probs=33.8

Q ss_pred             ccCCeEEEEcCCChhHHHHHHHHHHcCCceEEEEecCC
Q 017760            9 IEGKTFLVTGGLGHVGSALCLELVRRGAYQVRAFDLRT   46 (366)
Q Consensus         9 ~~~~~VlITGgtGfiG~~L~~~L~~~g~~~V~~~dr~~   46 (366)
                      +++++++||||+|++|+++++.|+++|+ +|++++|++
T Consensus         5 l~~k~vlVTGas~gIG~~ia~~l~~~G~-~V~~~~r~~   41 (260)
T 2z1n_A            5 IQGKLAVVTAGSSGLGFASALELARNGA-RLLLFSRNR   41 (260)
T ss_dssp             CTTCEEEEETTTSHHHHHHHHHHHHTTC-EEEEEESCH
T ss_pred             CCCCEEEEECCCchHHHHHHHHHHHCCC-EEEEEeCCH
Confidence            5668999999999999999999999995 899999875

>2ae2_A Protein (tropinone reductase-II); oxidoreductase, tropane alkaloid biosynthesis, reduction of tropinone to pseudotropine; HET: NAP PTO; 1.90A {Datura stramonium} SCOP: c.2.1.2 PDB: 2ae1_A* 1ipe_A* 1ipf_A*

Probab=98.62  E-value=1.4e-08  Score=92.14  Aligned_cols=38  Identities=37%  Similarity=0.459  Sum_probs=34.4

Q ss_pred             cccCCeEEEEcCCChhHHHHHHHHHHcCCceEEEEecCC
Q 017760            8 GIEGKTFLVTGGLGHVGSALCLELVRRGAYQVRAFDLRT   46 (366)
Q Consensus         8 ~~~~~~VlITGgtGfiG~~L~~~L~~~g~~~V~~~dr~~   46 (366)
                      .+++++++||||+|++|+++++.|+++|+ +|++++|++
T Consensus         6 ~l~~k~vlVTGas~giG~~ia~~l~~~G~-~V~~~~r~~   43 (260)
T 2ae2_A            6 NLEGCTALVTGGSRGIGYGIVEELASLGA-SVYTCSRNQ   43 (260)
T ss_dssp             CCTTCEEEEESCSSHHHHHHHHHHHHTTC-EEEEEESCH
T ss_pred             CCCCCEEEEECCCcHHHHHHHHHHHHCCC-EEEEEeCCH
Confidence            35678999999999999999999999995 899999875

>4dqx_A Probable oxidoreductase protein; structural genomics, PSI-biology, NEW YORK structural genomi research consortium, nysgrc; 2.00A {Rhizobium etli}

Probab=98.62  E-value=1.1e-07  Score=87.09  Aligned_cols=57  Identities=19%  Similarity=0.222  Sum_probs=42.6

Q ss_pred             cccCCeEEEEcCCChhHHHHHHHHHHcCCceEEEEecCCCCccc-ccccCCCeEEEEcc
Q 017760            8 GIEGKTFLVTGGLGHVGSALCLELVRRGAYQVRAFDLRTNSPWS-HLLINHGVHCIQGL   65 (366)
Q Consensus         8 ~~~~~~VlITGgtGfiG~~L~~~L~~~g~~~V~~~dr~~~~~~~-~~~~~~~v~~i~gD   65 (366)
                      .+++++++||||+|.||+++++.|+++|+ +|++++|+...... .......+.++++|
T Consensus        24 ~l~~k~vlVTGas~GIG~aia~~l~~~G~-~V~~~~r~~~~~~~~~~~~~~~~~~~~~D   81 (277)
T 4dqx_A           24 DLNQRVCIVTGGGSGIGRATAELFAKNGA-YVVVADVNEDAAVRVANEIGSKAFGVRVD   81 (277)
T ss_dssp             TTTTCEEEEETTTSHHHHHHHHHHHHTTC-EEEEEESSHHHHHHHHHHHCTTEEEEECC
T ss_pred             CCCCCEEEEECCCcHHHHHHHHHHHHCCC-EEEEEeCCHHHHHHHHHHhCCceEEEEec
Confidence            35578999999999999999999999995 89999987532111 11123456777777

>4ibo_A Gluconate dehydrogenase; enzyme function initiative structural genomics, oxidoreductase; 2.10A {Agrobacterium fabrum}

Probab=98.61  E-value=1.4e-08  Score=92.97  Aligned_cols=57  Identities=21%  Similarity=0.248  Sum_probs=41.7

Q ss_pred             cccCCeEEEEcCCChhHHHHHHHHHHcCCceEEEEecCCCCccc--ccc--cCCCeEEEEcc
Q 017760            8 GIEGKTFLVTGGLGHVGSALCLELVRRGAYQVRAFDLRTNSPWS--HLL--INHGVHCIQGL   65 (366)
Q Consensus         8 ~~~~~~VlITGgtGfiG~~L~~~L~~~g~~~V~~~dr~~~~~~~--~~~--~~~~v~~i~gD   65 (366)
                      .+++++++||||+|.||+++++.|++.|+ +|++.+|+......  ..+  ...++.++++|
T Consensus        23 ~l~gk~~lVTGas~gIG~aia~~la~~G~-~V~~~~r~~~~~~~~~~~l~~~~~~~~~~~~D   83 (271)
T 4ibo_A           23 DLGGRTALVTGSSRGLGRAMAEGLAVAGA-RILINGTDPSRVAQTVQEFRNVGHDAEAVAFD   83 (271)
T ss_dssp             CCTTCEEEETTCSSHHHHHHHHHHHHTTC-EEEECCSCHHHHHHHHHHHHHTTCCEEECCCC
T ss_pred             CCCCCEEEEeCCCcHHHHHHHHHHHHCCC-EEEEEeCCHHHHHHHHHHHHhcCCceEEEEcC
Confidence            35578999999999999999999999995 89999887532111  011  12456667777

>1nff_A Putative oxidoreductase RV2002; directed evolution, GFP, SDR, hydroxysteroid dehydrogenase, structural genomics, PSI; HET: NAD; 1.80A {Mycobacterium tuberculosis} SCOP: c.2.1.2 PDB: 1nfq_A* 1nfr_A*

Probab=98.61  E-value=7.4e-08  Score=87.41  Aligned_cols=37  Identities=32%  Similarity=0.458  Sum_probs=33.8

Q ss_pred             ccCCeEEEEcCCChhHHHHHHHHHHcCCceEEEEecCC
Q 017760            9 IEGKTFLVTGGLGHVGSALCLELVRRGAYQVRAFDLRT   46 (366)
Q Consensus         9 ~~~~~VlITGgtGfiG~~L~~~L~~~g~~~V~~~dr~~   46 (366)
                      +++++++||||+|++|+++++.|+++|+ +|++++|++
T Consensus         5 l~~k~vlVTGas~gIG~~ia~~l~~~G~-~V~~~~r~~   41 (260)
T 1nff_A            5 LTGKVALVSGGARGMGASHVRAMVAEGA-KVVFGDILD   41 (260)
T ss_dssp             TTTCEEEEETTTSHHHHHHHHHHHHTTC-EEEEEESCH
T ss_pred             CCCCEEEEeCCCCHHHHHHHHHHHHCCC-EEEEEeCCH
Confidence            5568999999999999999999999995 899999875

>2gdz_A NAD+-dependent 15-hydroxyprostaglandin dehydrogen; dehydrogenase, structural genomics, SH dehydrogenase/reductase, inflammation; HET: NAD; 1.65A {Homo sapiens} SCOP: c.2.1.2

Probab=98.61  E-value=1.4e-08  Score=92.40  Aligned_cols=39  Identities=33%  Similarity=0.474  Sum_probs=34.5

Q ss_pred             cccCCeEEEEcCCChhHHHHHHHHHHcCCceEEEEecCCC
Q 017760            8 GIEGKTFLVTGGLGHVGSALCLELVRRGAYQVRAFDLRTN   47 (366)
Q Consensus         8 ~~~~~~VlITGgtGfiG~~L~~~L~~~g~~~V~~~dr~~~   47 (366)
                      ++++++++||||+|++|+++++.|+++|+ +|++++|+..
T Consensus         4 m~~~k~vlVTGas~gIG~~ia~~l~~~G~-~V~~~~r~~~   42 (267)
T 2gdz_A            4 MVNGKVALVTGAAQGIGRAFAEALLLKGA-KVALVDWNLE   42 (267)
T ss_dssp             CCTTCEEEEETTTSHHHHHHHHHHHHTTC-EEEEEESCHH
T ss_pred             ccCCCEEEEECCCCcHHHHHHHHHHHCCC-EEEEEECCHH
Confidence            35568999999999999999999999995 8999998753

>4e3z_A Putative oxidoreductase protein; PSI-biology, structural genomics, protein structure initiati nysgrc,oxidoreductase; 2.00A {Rhizobium etli}

Probab=98.60  E-value=7.4e-08  Score=87.89  Aligned_cols=56  Identities=23%  Similarity=0.265  Sum_probs=39.1

Q ss_pred             ccCCeEEEEcCCChhHHHHHHHHHHcCCceEEEEecCCCCccc---ccc--cCCCeEEEEcc
Q 017760            9 IEGKTFLVTGGLGHVGSALCLELVRRGAYQVRAFDLRTNSPWS---HLL--INHGVHCIQGL   65 (366)
Q Consensus         9 ~~~~~VlITGgtGfiG~~L~~~L~~~g~~~V~~~dr~~~~~~~---~~~--~~~~v~~i~gD   65 (366)
                      .++++++||||+|+||++++++|+++|+ +|++.+.+......   ..+  ...++.++.+|
T Consensus        24 ~~~k~vlITGas~gIG~a~a~~l~~~G~-~V~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~D   84 (272)
T 4e3z_A           24 SDTPVVLVTGGSRGIGAAVCRLAARQGW-RVGVNYAANREAADAVVAAITESGGEAVAIPGD   84 (272)
T ss_dssp             CCSCEEEETTTTSHHHHHHHHHHHHTTC-EEEEEESSCHHHHHHHHHHHHHTTCEEEEEECC
T ss_pred             cCCCEEEEECCCchHHHHHHHHHHHCCC-EEEEEcCCChhHHHHHHHHHHhcCCcEEEEEcC
Confidence            3467899999999999999999999995 88887444322110   000  12456777777

>4iiu_A 3-oxoacyl-[acyl-carrier protein] reductase; structural genomics, center for structural genomics of infec diseases, csgid; HET: NAP; 2.10A {Escherichia coli} PDB: 4iiv_A*

Probab=98.60  E-value=1.4e-07  Score=85.86  Aligned_cols=69  Identities=9%  Similarity=-0.066  Sum_probs=47.1

Q ss_pred             CCCceEEEEeCCccccCCCCCCHHHHHHHHHcCCCCeeecCCCcceeceeHHHHHHHHHHHHhccccCCCCCCCCCCCCC
Q 017760           70 RKCLYTCAVRPAAIYGPGEERHLPRIVSLAKLGLVPFKIGEPSVKTDWIYVDNLVLALILASMGLLDDIPGQKGRPIASG  149 (366)
Q Consensus        70 ~~~l~~~ilRp~~iyGp~~~~~l~~~i~~~~~g~~~~~~g~~~~~~~~v~vdDla~a~~~a~~~l~~~~~~~~~~~~~~g  149 (366)
                      ..++++.+++|+.+..+..... +..........+         ...+.+.+|+|+++..++..         ......|
T Consensus       197 ~~gi~v~~v~PG~v~t~~~~~~-~~~~~~~~~~~p---------~~~~~~~edva~~~~~L~s~---------~~~~itG  257 (267)
T 4iiu_A          197 KRKITVNCIAPGLIDTGMIEME-ESALKEAMSMIP---------MKRMGQAEEVAGLASYLMSD---------IAGYVTR  257 (267)
T ss_dssp             GGTEEEEEEEECSBCSTTCCCC-HHHHHHHHHTCT---------TCSCBCHHHHHHHHHHHHSG---------GGTTCCS
T ss_pred             hcCeEEEEEEEeeecCCccccc-HHHHHHHHhcCC---------CCCCcCHHHHHHHHHHHhCC---------cccCccC
Confidence            3478999999999998865543 333333333322         13467899999999888752         1345678


Q ss_pred             ccEEecCC
Q 017760          150 QPYFVSDG  157 (366)
Q Consensus       150 ~~y~I~~~  157 (366)
                      +.+++.+|
T Consensus       258 ~~i~vdGG  265 (267)
T 4iiu_A          258 QVISINGG  265 (267)
T ss_dssp             CEEEESTT
T ss_pred             CEEEeCCC
Confidence            99999876

>2wyu_A Enoyl-[acyl carrier protein] reductase; oxidoreductase, fatty acid biosynthesis, oxidation reduction; 1.50A {Thermus thermophilus} PDB: 1ulu_A 2wyv_A* 2wyw_A* 2yw9_A*

Probab=98.60  E-value=8.4e-08  Score=87.03  Aligned_cols=37  Identities=30%  Similarity=0.326  Sum_probs=33.7

Q ss_pred             ccCCeEEEEcCC--ChhHHHHHHHHHHcCCceEEEEecCC
Q 017760            9 IEGKTFLVTGGL--GHVGSALCLELVRRGAYQVRAFDLRT   46 (366)
Q Consensus         9 ~~~~~VlITGgt--GfiG~~L~~~L~~~g~~~V~~~dr~~   46 (366)
                      +++++++||||+  |+||+++++.|+++|+ +|++++|+.
T Consensus         6 l~~k~vlVTGas~~~gIG~~ia~~l~~~G~-~V~~~~r~~   44 (261)
T 2wyu_A            6 LSGKKALVMGVTNQRSLGFAIAAKLKEAGA-EVALSYQAE   44 (261)
T ss_dssp             CTTCEEEEESCCSSSSHHHHHHHHHHHHTC-EEEEEESCG
T ss_pred             CCCCEEEEECCCCCCcHHHHHHHHHHHCCC-EEEEEcCCH
Confidence            556899999999  9999999999999995 899999875

>3vtz_A Glucose 1-dehydrogenase; rossmann fold, oxidoreductase, NAD binding; 2.30A {Thermoplasma volcanium}

Probab=98.59  E-value=3.2e-07  Score=83.64  Aligned_cols=52  Identities=31%  Similarity=0.312  Sum_probs=40.6

Q ss_pred             ccccCCeEEEEcCCChhHHHHHHHHHHcCCceEEEEecCCCCcccccccCCCeEEEEcc
Q 017760            7 EGIEGKTFLVTGGLGHVGSALCLELVRRGAYQVRAFDLRTNSPWSHLLINHGVHCIQGL   65 (366)
Q Consensus         7 ~~~~~~~VlITGgtGfiG~~L~~~L~~~g~~~V~~~dr~~~~~~~~~~~~~~v~~i~gD   65 (366)
                      ...++++|+||||+|.||+++++.|++.|+ +|++++|+.....      ..+..+++|
T Consensus        10 ~~~~~k~vlVTGas~GIG~aia~~l~~~G~-~V~~~~r~~~~~~------~~~~~~~~D   61 (269)
T 3vtz_A           10 EEFTDKVAIVTGGSSGIGLAVVDALVRYGA-KVVSVSLDEKSDV------NVSDHFKID   61 (269)
T ss_dssp             CTTTTCEEEESSTTSHHHHHHHHHHHHTTC-EEEEEESCC--CT------TSSEEEECC
T ss_pred             cCCCCCEEEEeCCCCHHHHHHHHHHHHCCC-EEEEEeCCchhcc------CceeEEEec
Confidence            345679999999999999999999999995 8999998864321      244566666

>1uls_A Putative 3-oxoacyl-acyl carrier protein reductase; structural genomics, riken structural genomics/proteomics initiative, RSGI; 2.40A {Thermus thermophilus} SCOP: c.2.1.2

Probab=98.59  E-value=2.1e-07  Score=83.63  Aligned_cols=37  Identities=27%  Similarity=0.443  Sum_probs=33.6

Q ss_pred             ccCCeEEEEcCCChhHHHHHHHHHHcCCceEEEEecCC
Q 017760            9 IEGKTFLVTGGLGHVGSALCLELVRRGAYQVRAFDLRT   46 (366)
Q Consensus         9 ~~~~~VlITGgtGfiG~~L~~~L~~~g~~~V~~~dr~~   46 (366)
                      +++++++||||+|.+|+++++.|+++|+ +|++++|+.
T Consensus         3 l~~k~vlVTGas~giG~~ia~~l~~~G~-~V~~~~r~~   39 (245)
T 1uls_A            3 LKDKAVLITGAAHGIGRATLELFAKEGA-RLVACDIEE   39 (245)
T ss_dssp             TTTCEEEEESTTSHHHHHHHHHHHHTTC-EEEEEESCH
T ss_pred             CCCCEEEEECCCCHHHHHHHHHHHHCCC-EEEEEeCCH
Confidence            4568999999999999999999999995 899999875

>2yut_A Putative short-chain oxidoreductase; alpha and beta proteins (A/B), NAD(P)-binding rossmann-fold structural genomics, NPPSFA; HET: NAP; 2.20A {Thermus thermophilus}

Probab=98.59  E-value=1.7e-08  Score=87.94  Aligned_cols=32  Identities=25%  Similarity=0.337  Sum_probs=29.1

Q ss_pred             CeEEEEcCCChhHHHHHHHHHHcCCceEEEEecCC
Q 017760           12 KTFLVTGGLGHVGSALCLELVRRGAYQVRAFDLRT   46 (366)
Q Consensus        12 ~~VlITGgtGfiG~~L~~~L~~~g~~~V~~~dr~~   46 (366)
                      |+++||||+|++|++++++|+++   +|++++|++
T Consensus         1 k~vlVtGasg~iG~~la~~l~~~---~V~~~~r~~   32 (207)
T 2yut_A            1 MRVLITGATGGLGGAFARALKGH---DLLLSGRRA   32 (207)
T ss_dssp             CEEEEETTTSHHHHHHHHHTTTS---EEEEECSCH
T ss_pred             CEEEEEcCCcHHHHHHHHHHHhC---CEEEEECCH
Confidence            57999999999999999999988   699998864

>3ksu_A 3-oxoacyl-acyl carrier protein reductase; structural genomics, PSI-2, dehydrogenase, protein structure initiative; 2.30A {Oenococcus oeni psu-1}

Probab=98.59  E-value=1e-07  Score=86.56  Aligned_cols=64  Identities=14%  Similarity=0.205  Sum_probs=45.3

Q ss_pred             CCccccccccCCeEEEEcCCChhHHHHHHHHHHcCCceEEEEecCCCCcc-cc----cc--cCCCeEEEEcc
Q 017760            1 MHLSENEGIEGKTFLVTGGLGHVGSALCLELVRRGAYQVRAFDLRTNSPW-SH----LL--INHGVHCIQGL   65 (366)
Q Consensus         1 m~~~~~~~~~~~~VlITGgtGfiG~~L~~~L~~~g~~~V~~~dr~~~~~~-~~----~~--~~~~v~~i~gD   65 (366)
                      |..+....+++++++||||+|.||+++++.|.+.|+ +|+++++...... ..    .+  ...++.++++|
T Consensus         1 m~~~~~~~l~~k~vlVTGas~GIG~aia~~la~~G~-~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~~~D   71 (262)
T 3ksu_A            1 MSLTKYHDLKNKVIVIAGGIKNLGALTAKTFALESV-NLVLHYHQAKDSDTANKLKDELEDQGAKVALYQSD   71 (262)
T ss_dssp             ---CCCSCCTTCEEEEETCSSHHHHHHHHHHTTSSC-EEEEEESCGGGHHHHHHHHHHHHTTTCEEEEEECC
T ss_pred             CCCccccCCCCCEEEEECCCchHHHHHHHHHHHCCC-EEEEEecCccCHHHHHHHHHHHHhcCCcEEEEECC
Confidence            555565667789999999999999999999999995 8999987542211 11    11  13457778888

>2rhc_B Actinorhodin polyketide ketoreductase; oxidoreductase, combinatorial biosynthesis, short chain dehydrogenase/reductase; HET: NAP EMO; 2.10A {Streptomyces coelicolor} SCOP: c.2.1.2 PDB: 2rh4_A* 1w4z_A* 3csd_B* 3qrw_A* 3ri3_B* 2rhr_B* 1x7g_A* 1x7h_A* 1xr3_A*

Probab=98.58  E-value=3.3e-08  Score=90.58  Aligned_cols=37  Identities=22%  Similarity=0.276  Sum_probs=33.6

Q ss_pred             ccCCeEEEEcCCChhHHHHHHHHHHcCCceEEEEecCC
Q 017760            9 IEGKTFLVTGGLGHVGSALCLELVRRGAYQVRAFDLRT   46 (366)
Q Consensus         9 ~~~~~VlITGgtGfiG~~L~~~L~~~g~~~V~~~dr~~   46 (366)
                      +++++++||||+|+||+++++.|+++|+ +|++++|++
T Consensus        20 l~~k~vlVTGas~gIG~~ia~~l~~~G~-~V~~~~r~~   56 (277)
T 2rhc_B           20 QDSEVALVTGATSGIGLEIARRLGKEGL-RVFVCARGE   56 (277)
T ss_dssp             TTSCEEEEETCSSHHHHHHHHHHHHTTC-EEEEEESCH
T ss_pred             CCCCEEEEECCCCHHHHHHHHHHHHCCC-EEEEEeCCH
Confidence            4568999999999999999999999995 899999875

>1iy8_A Levodione reductase; oxidoreductase; HET: NAD; 1.60A {Leifsonia aquatica} SCOP: c.2.1.2

Probab=98.58  E-value=1.3e-07  Score=85.98  Aligned_cols=38  Identities=26%  Similarity=0.482  Sum_probs=34.5

Q ss_pred             cccCCeEEEEcCCChhHHHHHHHHHHcCCceEEEEecCC
Q 017760            8 GIEGKTFLVTGGLGHVGSALCLELVRRGAYQVRAFDLRT   46 (366)
Q Consensus         8 ~~~~~~VlITGgtGfiG~~L~~~L~~~g~~~V~~~dr~~   46 (366)
                      .+++++++||||+|.||+++++.|+++|+ +|++++|+.
T Consensus        10 ~l~~k~vlVTGas~gIG~~ia~~l~~~G~-~V~~~~r~~   47 (267)
T 1iy8_A           10 RFTDRVVLITGGGSGLGRATAVRLAAEGA-KLSLVDVSS   47 (267)
T ss_dssp             CCTTCEEEEETTTSHHHHHHHHHHHHTTC-EEEEEESCH
T ss_pred             cCCCCEEEEECCCCHHHHHHHHHHHHCCC-EEEEEeCCH
Confidence            35678999999999999999999999995 899999875

>1uzm_A 3-oxoacyl-[acyl-carrier protein] reductase; beta-ketoacyl reductase, oxidoreductase; 1.49A {Mycobacterium tuberculosis} SCOP: c.2.1.2 PDB: 1uzn_A* 2ntn_A 1uzl_A

Probab=98.58  E-value=1.7e-07  Score=84.25  Aligned_cols=39  Identities=26%  Similarity=0.363  Sum_probs=34.8

Q ss_pred             cccCCeEEEEcCCChhHHHHHHHHHHcCCceEEEEecCCC
Q 017760            8 GIEGKTFLVTGGLGHVGSALCLELVRRGAYQVRAFDLRTN   47 (366)
Q Consensus         8 ~~~~~~VlITGgtGfiG~~L~~~L~~~g~~~V~~~dr~~~   47 (366)
                      .+++++++||||+|++|+++++.|.++|+ +|++++|++.
T Consensus        12 ~l~~k~vlVTGas~gIG~~ia~~l~~~G~-~V~~~~r~~~   50 (247)
T 1uzm_A           12 PFVSRSVLVTGGNRGIGLAIAQRLAADGH-KVAVTHRGSG   50 (247)
T ss_dssp             CCCCCEEEETTTTSHHHHHHHHHHHHTTC-EEEEEESSSC
T ss_pred             cCCCCEEEEeCCCCHHHHHHHHHHHHCCC-EEEEEeCChH
Confidence            35678999999999999999999999995 8999999764

>3sju_A Keto reductase; short-chain dehydrogenase, oxidoreductase; HET: NDP; 2.40A {Streptomyces griseoruber}

Probab=98.57  E-value=6.9e-08  Score=88.61  Aligned_cols=57  Identities=23%  Similarity=0.141  Sum_probs=40.6

Q ss_pred             cccCCeEEEEcCCChhHHHHHHHHHHcCCceEEEEecCCCCccc--ccc--cCCCeEEEEcc
Q 017760            8 GIEGKTFLVTGGLGHVGSALCLELVRRGAYQVRAFDLRTNSPWS--HLL--INHGVHCIQGL   65 (366)
Q Consensus         8 ~~~~~~VlITGgtGfiG~~L~~~L~~~g~~~V~~~dr~~~~~~~--~~~--~~~~v~~i~gD   65 (366)
                      ++++++++||||+|.||+++++.|+++|+ +|++++|+......  ..+  ...++.++.+|
T Consensus        21 m~~~k~~lVTGas~GIG~aia~~la~~G~-~V~~~~r~~~~~~~~~~~l~~~~~~~~~~~~D   81 (279)
T 3sju_A           21 MSRPQTAFVTGVSSGIGLAVARTLAARGI-AVYGCARDAKNVSAAVDGLRAAGHDVDGSSCD   81 (279)
T ss_dssp             ----CEEEEESTTSHHHHHHHHHHHHTTC-EEEEEESCHHHHHHHHHHHHTTTCCEEEEECC
T ss_pred             ccCCCEEEEeCCCCHHHHHHHHHHHHCCC-EEEEEeCCHHHHHHHHHHHHhcCCcEEEEECC
Confidence            45678999999999999999999999995 89999987532111  111  13467778888

>3oid_A Enoyl-[acyl-carrier-protein] reductase [NADPH]; fatty acid synthesis, enoyl-ACP reductases, FABL, rossmann-L NADPH binding, oxidoreductase; HET: TCL NDP; 1.80A {Bacillus subtilis} PDB: 3oic_A*

Probab=98.57  E-value=9.1e-08  Score=86.75  Aligned_cols=56  Identities=20%  Similarity=0.225  Sum_probs=39.8

Q ss_pred             ccCCeEEEEcCCChhHHHHHHHHHHcCCceEEEE-ecCCCCccc--ccc--cCCCeEEEEcc
Q 017760            9 IEGKTFLVTGGLGHVGSALCLELVRRGAYQVRAF-DLRTNSPWS--HLL--INHGVHCIQGL   65 (366)
Q Consensus         9 ~~~~~VlITGgtGfiG~~L~~~L~~~g~~~V~~~-dr~~~~~~~--~~~--~~~~v~~i~gD   65 (366)
                      +++++++||||+|+||+++++.|+++|+ +|++. +|+......  ..+  ...++.++++|
T Consensus         2 ~~~k~vlVTGas~gIG~aia~~l~~~G~-~vv~~~~r~~~~~~~~~~~~~~~~~~~~~~~~D   62 (258)
T 3oid_A            2 EQNKCALVTGSSRGVGKAAAIRLAENGY-NIVINYARSKKAALETAEEIEKLGVKVLVVKAN   62 (258)
T ss_dssp             -CCCEEEESSCSSHHHHHHHHHHHHTTC-EEEEEESSCHHHHHHHHHHHHTTTCCEEEEECC
T ss_pred             CCCCEEEEecCCchHHHHHHHHHHHCCC-EEEEEcCCCHHHHHHHHHHHHhcCCcEEEEEcC
Confidence            4568999999999999999999999995 88887 554321110  111  13467788888

>2ew8_A (S)-1-phenylethanol dehydrogenase; transferase; 2.10A {Azoarcus SP} SCOP: c.2.1.2 PDB: 2ewm_A*

Probab=98.57  E-value=1.9e-07  Score=84.05  Aligned_cols=56  Identities=20%  Similarity=0.305  Sum_probs=41.8

Q ss_pred             ccCCeEEEEcCCChhHHHHHHHHHHcCCceEEEEecCCCCcccccc--cCCCeEEEEcc
Q 017760            9 IEGKTFLVTGGLGHVGSALCLELVRRGAYQVRAFDLRTNSPWSHLL--INHGVHCIQGL   65 (366)
Q Consensus         9 ~~~~~VlITGgtGfiG~~L~~~L~~~g~~~V~~~dr~~~~~~~~~~--~~~~v~~i~gD   65 (366)
                      +++++++||||+|.+|+++++.|+++|+ +|++++|++.......+  ...++.++++|
T Consensus         5 l~~k~vlVTGas~gIG~~ia~~l~~~G~-~V~~~~r~~~~~~~~~~~~~~~~~~~~~~D   62 (249)
T 2ew8_A            5 LKDKLAVITGGANGIGRAIAERFAVEGA-DIAIADLVPAPEAEAAIRNLGRRVLTVKCD   62 (249)
T ss_dssp             TTTCEEEEETTTSHHHHHHHHHHHHTTC-EEEEEESSCCHHHHHHHHHTTCCEEEEECC
T ss_pred             CCCCEEEEeCCCcHHHHHHHHHHHHCCC-EEEEEcCCchhHHHHHHHhcCCcEEEEEee
Confidence            5668999999999999999999999995 89999998621111111  12456777777

>1ae1_A Tropinone reductase-I; oxidoreductase, tropane alkaloid biosynthesis, reduction of tropinone to tropine, short-chain dehydrogenase; HET: NAP; 2.40A {Datura stramonium} SCOP: c.2.1.2

Probab=98.56  E-value=1.5e-07  Score=85.98  Aligned_cols=37  Identities=38%  Similarity=0.492  Sum_probs=33.8

Q ss_pred             ccCCeEEEEcCCChhHHHHHHHHHHcCCceEEEEecCC
Q 017760            9 IEGKTFLVTGGLGHVGSALCLELVRRGAYQVRAFDLRT   46 (366)
Q Consensus         9 ~~~~~VlITGgtGfiG~~L~~~L~~~g~~~V~~~dr~~   46 (366)
                      +++++++||||+|.+|+++++.|++.|+ +|++++|+.
T Consensus        19 l~~k~vlVTGas~gIG~aia~~l~~~G~-~V~~~~r~~   55 (273)
T 1ae1_A           19 LKGTTALVTGGSKGIGYAIVEELAGLGA-RVYTCSRNE   55 (273)
T ss_dssp             CTTCEEEEESCSSHHHHHHHHHHHHTTC-EEEEEESCH
T ss_pred             CCCCEEEEECCcchHHHHHHHHHHHCCC-EEEEEeCCH
Confidence            4568999999999999999999999995 899999875

>3r1i_A Short-chain type dehydrogenase/reductase; structural genomics, seattle structural genomics center for infectious disease, ssgcid; 1.95A {Mycobacterium marinum}

Probab=98.56  E-value=1.6e-07  Score=85.98  Aligned_cols=57  Identities=21%  Similarity=0.255  Sum_probs=43.6

Q ss_pred             cccCCeEEEEcCCChhHHHHHHHHHHcCCceEEEEecCCCCccc--ccc--cCCCeEEEEcc
Q 017760            8 GIEGKTFLVTGGLGHVGSALCLELVRRGAYQVRAFDLRTNSPWS--HLL--INHGVHCIQGL   65 (366)
Q Consensus         8 ~~~~~~VlITGgtGfiG~~L~~~L~~~g~~~V~~~dr~~~~~~~--~~~--~~~~v~~i~gD   65 (366)
                      .+++++++||||+|.||+++++.|+++|+ +|++++|+......  ..+  ...++.++++|
T Consensus        29 ~l~gk~~lVTGas~GIG~aia~~la~~G~-~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~D   89 (276)
T 3r1i_A           29 DLSGKRALITGASTGIGKKVALAYAEAGA-QVAVAARHSDALQVVADEIAGVGGKALPIRCD   89 (276)
T ss_dssp             CCTTCEEEEESTTSHHHHHHHHHHHHTTC-EEEEEESSGGGGHHHHHHHHHTTCCCEEEECC
T ss_pred             CCCCCEEEEeCCCCHHHHHHHHHHHHCCC-EEEEEeCCHHHHHHHHHHHHhcCCeEEEEEcC
Confidence            45678999999999999999999999995 89999997543211  111  13467788888

>3qlj_A Short chain dehydrogenase; structural genomics, seattle structural genomics center for infectious disease, ssgcid, tuberculosis; 1.80A {Mycobacterium avium}

Probab=98.56  E-value=2.4e-08  Score=93.60  Aligned_cols=36  Identities=33%  Similarity=0.589  Sum_probs=32.8

Q ss_pred             ccCCeEEEEcCCChhHHHHHHHHHHcCCceEEEEecC
Q 017760            9 IEGKTFLVTGGLGHVGSALCLELVRRGAYQVRAFDLR   45 (366)
Q Consensus         9 ~~~~~VlITGgtGfiG~~L~~~L~~~g~~~V~~~dr~   45 (366)
                      +++++++||||+|.||+++++.|++.|+ +|++++++
T Consensus        25 l~gk~vlVTGas~GIG~aia~~la~~G~-~Vv~~~r~   60 (322)
T 3qlj_A           25 VDGRVVIVTGAGGGIGRAHALAFAAEGA-RVVVNDIG   60 (322)
T ss_dssp             TTTCEEEETTTTSHHHHHHHHHHHHTTC-EEEEECCC
T ss_pred             cCCCEEEEECCCcHHHHHHHHHHHHCCC-EEEEEeCc
Confidence            3467899999999999999999999995 89999986

>3pxx_A Carveol dehydrogenase; structural genomics, seattle structural genomics center for infectious disease, ssgcid, NAD, tuberculosis; HET: NAD; 2.00A {Mycobacterium avium} SCOP: c.2.1.0

Probab=98.55  E-value=7.8e-07  Score=81.48  Aligned_cols=40  Identities=30%  Similarity=0.481  Sum_probs=35.4

Q ss_pred             cccccCCeEEEEcCCChhHHHHHHHHHHcCCceEEEEecCC
Q 017760            6 NEGIEGKTFLVTGGLGHVGSALCLELVRRGAYQVRAFDLRT   46 (366)
Q Consensus         6 ~~~~~~~~VlITGgtGfiG~~L~~~L~~~g~~~V~~~dr~~   46 (366)
                      +..+++++++||||+|.||+++++.|+++|+ +|+++|++.
T Consensus         5 m~~l~gk~vlVTGas~gIG~~ia~~l~~~G~-~V~~~~~~~   44 (287)
T 3pxx_A            5 MGRVQDKVVLVTGGARGQGRSHAVKLAEEGA-DIILFDICH   44 (287)
T ss_dssp             CCTTTTCEEEEETTTSHHHHHHHHHHHHTTC-EEEEEECCS
T ss_pred             ccccCCCEEEEeCCCChHHHHHHHHHHHCCC-eEEEEcccc
Confidence            3346678999999999999999999999995 899999874

>4egf_A L-xylulose reductase; structural genomics, ssgcid, seattle structural genomics CEN infectious disease, oxidoreductase; 2.30A {Mycobacterium smegmatis}

Probab=98.54  E-value=7.4e-08  Score=87.74  Aligned_cols=57  Identities=19%  Similarity=0.257  Sum_probs=43.3

Q ss_pred             cccCCeEEEEcCCChhHHHHHHHHHHcCCceEEEEecCCCCccc--ccc---cCCCeEEEEcc
Q 017760            8 GIEGKTFLVTGGLGHVGSALCLELVRRGAYQVRAFDLRTNSPWS--HLL---INHGVHCIQGL   65 (366)
Q Consensus         8 ~~~~~~VlITGgtGfiG~~L~~~L~~~g~~~V~~~dr~~~~~~~--~~~---~~~~v~~i~gD   65 (366)
                      .+++++++||||+|.||+++++.|.+.|+ +|++.+|+......  ..+   ...++.++++|
T Consensus        17 ~l~~k~vlVTGas~gIG~aia~~l~~~G~-~V~~~~r~~~~~~~~~~~l~~~~~~~~~~~~~D   78 (266)
T 4egf_A           17 RLDGKRALITGATKGIGADIARAFAAAGA-RLVLSGRDVSELDAARRALGEQFGTDVHTVAID   78 (266)
T ss_dssp             CCTTCEEEETTTTSHHHHHHHHHHHHTTC-EEEEEESCHHHHHHHHHHHHHHHCCCEEEEECC
T ss_pred             CCCCCEEEEeCCCcHHHHHHHHHHHHCCC-EEEEEeCCHHHHHHHHHHHHHhcCCcEEEEEec
Confidence            35578999999999999999999999995 89999987532211  111   23567888888

>3tox_A Short chain dehydrogenase; structural genomics, PSI-biology, NEW YORK structural genomi research consortium, nysgrc, oxidoreductase; HET: NAP; 1.93A {Sinorhizobium meliloti}

Probab=98.54  E-value=9.8e-08  Score=87.68  Aligned_cols=38  Identities=37%  Similarity=0.491  Sum_probs=34.1

Q ss_pred             ccCCeEEEEcCCChhHHHHHHHHHHcCCceEEEEecCCC
Q 017760            9 IEGKTFLVTGGLGHVGSALCLELVRRGAYQVRAFDLRTN   47 (366)
Q Consensus         9 ~~~~~VlITGgtGfiG~~L~~~L~~~g~~~V~~~dr~~~   47 (366)
                      +++++++||||+|.||+++++.|++.|+ +|++++|+..
T Consensus         6 l~gk~vlVTGas~GIG~aia~~la~~G~-~V~~~~r~~~   43 (280)
T 3tox_A            6 LEGKIAIVTGASSGIGRAAALLFAREGA-KVVVTARNGN   43 (280)
T ss_dssp             TTTCEEEESSTTSHHHHHHHHHHHHTTC-EEEECCSCHH
T ss_pred             CCCCEEEEECCCcHHHHHHHHHHHHCCC-EEEEEECCHH
Confidence            4568999999999999999999999995 8999998753

>3uce_A Dehydrogenase; rossmann fold, oxidoreductase; HET: NDP; 1.80A {Vibrio vulnificus}

Probab=98.54  E-value=1.4e-07  Score=83.32  Aligned_cols=38  Identities=21%  Similarity=0.320  Sum_probs=33.3

Q ss_pred             ccCCeEEEEcCCChhHHHHHHHHHHcCCceEEEEecCCC
Q 017760            9 IEGKTFLVTGGLGHVGSALCLELVRRGAYQVRAFDLRTN   47 (366)
Q Consensus         9 ~~~~~VlITGgtGfiG~~L~~~L~~~g~~~V~~~dr~~~   47 (366)
                      +++++++||||+|.||++++++|.+.| ++|++.+|+..
T Consensus         4 ~~~k~vlVTGas~gIG~~~a~~l~~~G-~~V~~~~r~~~   41 (223)
T 3uce_A            4 SDKTVYVVLGGTSGIGAELAKQLESEH-TIVHVASRQTG   41 (223)
T ss_dssp             -CCEEEEEETTTSHHHHHHHHHHCSTT-EEEEEESGGGT
T ss_pred             CCCCEEEEECCCCHHHHHHHHHHHHCC-CEEEEecCCcc
Confidence            456789999999999999999999999 48999988753

>1hdc_A 3-alpha, 20 beta-hydroxysteroid dehydrogenase; oxidoreductase; HET: CBO; 2.20A {Streptomyces exfoliatus} SCOP: c.2.1.2 PDB: 2hsd_A*

Probab=98.54  E-value=2e-07  Score=84.23  Aligned_cols=37  Identities=32%  Similarity=0.500  Sum_probs=33.8

Q ss_pred             ccCCeEEEEcCCChhHHHHHHHHHHcCCceEEEEecCC
Q 017760            9 IEGKTFLVTGGLGHVGSALCLELVRRGAYQVRAFDLRT   46 (366)
Q Consensus         9 ~~~~~VlITGgtGfiG~~L~~~L~~~g~~~V~~~dr~~   46 (366)
                      +++++++||||+|++|+++++.|+++|+ +|++++|++
T Consensus         3 l~~k~vlVTGas~gIG~~ia~~l~~~G~-~V~~~~r~~   39 (254)
T 1hdc_A            3 LSGKTVIITGGARGLGAEAARQAVAAGA-RVVLADVLD   39 (254)
T ss_dssp             CCCSEEEEETTTSHHHHHHHHHHHHTTC-EEEEEESCH
T ss_pred             CCCCEEEEECCCcHHHHHHHHHHHHCCC-EEEEEeCCH
Confidence            4678999999999999999999999995 899999875

>1mxh_A Pteridine reductase 2; SDR topology, protein-substrate complex, oxidoreductase; HET: NAP DHF; 2.20A {Trypanosoma cruzi} SCOP: c.2.1.2 PDB: 1mxf_A*

Probab=98.54  E-value=1.9e-07  Score=85.18  Aligned_cols=43  Identities=23%  Similarity=0.385  Sum_probs=31.6

Q ss_pred             CCccccccccCCeEEEEcCCChhHHHHHHHHHHcCCceEEEEec
Q 017760            1 MHLSENEGIEGKTFLVTGGLGHVGSALCLELVRRGAYQVRAFDL   44 (366)
Q Consensus         1 m~~~~~~~~~~~~VlITGgtGfiG~~L~~~L~~~g~~~V~~~dr   44 (366)
                      |..+....|++++++||||+|+||+++++.|+++|+ +|++++|
T Consensus         1 m~~~~~~~~~~k~~lVTGas~gIG~~ia~~l~~~G~-~V~~~~r   43 (276)
T 1mxh_A            1 MNETSHEASECPAAVITGGARRIGHSIAVRLHQQGF-RVVVHYR   43 (276)
T ss_dssp             ----------CCEEEETTCSSHHHHHHHHHHHHTTC-EEEEEES
T ss_pred             CcchhhhccCCCEEEEeCCCcHHHHHHHHHHHHCCC-EEEEEeC
Confidence            444444556778999999999999999999999995 8999998

>3r3s_A Oxidoreductase; structural genomics, csgid, center for structural genomics O infectious diseases, 3-layer(ABA) sandwich, rossmann fold; HET: NAD; 1.25A {Salmonella enterica subsp}

Probab=98.54  E-value=8.5e-08  Score=88.70  Aligned_cols=37  Identities=32%  Similarity=0.466  Sum_probs=33.3

Q ss_pred             ccCCeEEEEcCCChhHHHHHHHHHHcCCceEEEEecCC
Q 017760            9 IEGKTFLVTGGLGHVGSALCLELVRRGAYQVRAFDLRT   46 (366)
Q Consensus         9 ~~~~~VlITGgtGfiG~~L~~~L~~~g~~~V~~~dr~~   46 (366)
                      +++++++||||+|.||+++++.|+++|+ +|++.+++.
T Consensus        47 l~~k~vlVTGas~GIG~aia~~la~~G~-~V~~~~~~~   83 (294)
T 3r3s_A           47 LKDRKALVTGGDSGIGRAAAIAYAREGA-DVAINYLPA   83 (294)
T ss_dssp             TTTCEEEEETTTSHHHHHHHHHHHHTTC-EEEEECCGG
T ss_pred             CCCCEEEEeCCCcHHHHHHHHHHHHCCC-EEEEEeCCc
Confidence            4568999999999999999999999995 899998874

>3e9n_A Putative short-chain dehydrogenase/reductase; structural genomics, unknown function, oxidoreductase, PSI- 2; 2.40A {Corynebacterium glutamicum}

Probab=98.53  E-value=9.6e-08  Score=85.69  Aligned_cols=36  Identities=28%  Similarity=0.382  Sum_probs=30.2

Q ss_pred             ccCCeEEEEcCCChhHHHHHHHHHHcCCceEEEEecCC
Q 017760            9 IEGKTFLVTGGLGHVGSALCLELVRRGAYQVRAFDLRT   46 (366)
Q Consensus         9 ~~~~~VlITGgtGfiG~~L~~~L~~~g~~~V~~~dr~~   46 (366)
                      +++++++||||+|++|+++++.|.+ |. +|++++|++
T Consensus         3 l~~k~vlITGas~gIG~~~a~~l~~-g~-~v~~~~r~~   38 (245)
T 3e9n_A            3 LKKKIAVVTGATGGMGIEIVKDLSR-DH-IVYALGRNP   38 (245)
T ss_dssp             ---CEEEEESTTSHHHHHHHHHHTT-TS-EEEEEESCH
T ss_pred             CCCCEEEEEcCCCHHHHHHHHHHhC-CC-eEEEEeCCH
Confidence            4568999999999999999999988 84 899999875

>3u9l_A 3-oxoacyl-[acyl-carrier-protein] reductase; structural genomics, PSI-biology, NEW YORK structural genomi research consortium, nysgrc; 2.10A {Sinorhizobium meliloti}

Probab=98.53  E-value=2.5e-07  Score=86.79  Aligned_cols=56  Identities=16%  Similarity=0.104  Sum_probs=41.2

Q ss_pred             ccCCeEEEEcCCChhHHHHHHHHHHcCCceEEEEecCCCCcccc---cc------cCCCeEEEEcc
Q 017760            9 IEGKTFLVTGGLGHVGSALCLELVRRGAYQVRAFDLRTNSPWSH---LL------INHGVHCIQGL   65 (366)
Q Consensus         9 ~~~~~VlITGgtGfiG~~L~~~L~~~g~~~V~~~dr~~~~~~~~---~~------~~~~v~~i~gD   65 (366)
                      |++++++||||+|+||+++++.|+++|+ +|++.+|+.......   .+      ...++.++++|
T Consensus         3 m~~k~vlVTGas~GIG~aia~~L~~~G~-~V~~~~r~~~~r~~~~~~~l~~~~~~~~~~~~~~~~D   67 (324)
T 3u9l_A            3 MSKKIILITGASSGFGRLTAEALAGAGH-RVYASMRDIVGRNASNVEAIAGFARDNDVDLRTLELD   67 (324)
T ss_dssp             --CCEEEESSCSSHHHHHHHHHHHHTTC-EEEEEESCTTTTTHHHHHHHHHHHHHHTCCEEEEECC
T ss_pred             CCCCEEEEECCCcHHHHHHHHHHHHCCC-EEEEecCcccccCHHHHHHHHHHHHhcCCcEEEEEee
Confidence            4568999999999999999999999995 899998874322111   11      13467788888

>3gvc_A Oxidoreductase, probable short-chain type dehydrogenase/reductase; ssgcid, decode, niaid, UWPPG, SBRI, structural genomics; 2.45A {Mycobacterium tuberculosis}

Probab=98.51  E-value=1.3e-07  Score=86.62  Aligned_cols=56  Identities=23%  Similarity=0.283  Sum_probs=41.8

Q ss_pred             ccCCeEEEEcCCChhHHHHHHHHHHcCCceEEEEecCCCCccc-ccccCCCeEEEEcc
Q 017760            9 IEGKTFLVTGGLGHVGSALCLELVRRGAYQVRAFDLRTNSPWS-HLLINHGVHCIQGL   65 (366)
Q Consensus         9 ~~~~~VlITGgtGfiG~~L~~~L~~~g~~~V~~~dr~~~~~~~-~~~~~~~v~~i~gD   65 (366)
                      +++++++||||+|.||+++++.|++.|+ +|++++|+...... ......++.++++|
T Consensus        27 l~gk~vlVTGas~gIG~aia~~la~~G~-~V~~~~r~~~~~~~~~~~~~~~~~~~~~D   83 (277)
T 3gvc_A           27 LAGKVAIVTGAGAGIGLAVARRLADEGC-HVLCADIDGDAADAAATKIGCGAAACRVD   83 (277)
T ss_dssp             CTTCEEEETTTTSTHHHHHHHHHHHTTC-EEEEEESSHHHHHHHHHHHCSSCEEEECC
T ss_pred             CCCCEEEEECCCcHHHHHHHHHHHHCCC-EEEEEeCCHHHHHHHHHHcCCcceEEEec
Confidence            4568899999999999999999999995 89999987532211 01113456777777

>1vl8_A Gluconate 5-dehydrogenase; TM0441, structural genomics, JCSG structure initiative, PSI, joint center for structural GENO oxidoreductase; HET: NAP; 2.07A {Thermotoga maritima} SCOP: c.2.1.2

Probab=98.50  E-value=1.8e-07  Score=85.25  Aligned_cols=39  Identities=26%  Similarity=0.341  Sum_probs=34.8

Q ss_pred             ccccCCeEEEEcCCChhHHHHHHHHHHcCCceEEEEecCC
Q 017760            7 EGIEGKTFLVTGGLGHVGSALCLELVRRGAYQVRAFDLRT   46 (366)
Q Consensus         7 ~~~~~~~VlITGgtGfiG~~L~~~L~~~g~~~V~~~dr~~   46 (366)
                      ..+++++++||||+|+||+++++.|+++|+ +|++++|+.
T Consensus        17 ~~l~~k~~lVTGas~gIG~~ia~~l~~~G~-~V~~~~r~~   55 (267)
T 1vl8_A           17 FDLRGRVALVTGGSRGLGFGIAQGLAEAGC-SVVVASRNL   55 (267)
T ss_dssp             CCCTTCEEEEETTTSHHHHHHHHHHHHTTC-EEEEEESCH
T ss_pred             cCCCCCEEEEECCCCHHHHHHHHHHHHCCC-EEEEEeCCH
Confidence            345678999999999999999999999995 899999875

>3ctm_A Carbonyl reductase; alcohol dehydrogenase, short-chain dehydrogenases/reductases (SDR), X-RAY crystallography, oxidoreductase; 2.69A {Candida parapsilosis}

Probab=98.50  E-value=6.2e-07  Score=81.86  Aligned_cols=39  Identities=28%  Similarity=0.378  Sum_probs=35.0

Q ss_pred             ccCCeEEEEcCCChhHHHHHHHHHHcCCceEEEEecCCCC
Q 017760            9 IEGKTFLVTGGLGHVGSALCLELVRRGAYQVRAFDLRTNS   48 (366)
Q Consensus         9 ~~~~~VlITGgtGfiG~~L~~~L~~~g~~~V~~~dr~~~~   48 (366)
                      +++++++||||+|++|++++++|+++|+ +|++++|+...
T Consensus        32 l~~k~vlITGasggIG~~la~~L~~~G~-~V~~~~r~~~~   70 (279)
T 3ctm_A           32 LKGKVASVTGSSGGIGWAVAEAYAQAGA-DVAIWYNSHPA   70 (279)
T ss_dssp             CTTCEEEETTTTSSHHHHHHHHHHHHTC-EEEEEESSSCC
T ss_pred             CCCCEEEEECCCcHHHHHHHHHHHHCCC-EEEEEeCCHHH
Confidence            5678999999999999999999999995 89999998653

>1hxh_A 3BETA/17BETA-hydroxysteroid dehydrogenase; alpha-beta, rossmann fold, short-chain dehydrogenase, oxidoreductase; 1.22A {Comamonas testosteroni} SCOP: c.2.1.2

Probab=98.50  E-value=9.9e-08  Score=86.12  Aligned_cols=38  Identities=37%  Similarity=0.508  Sum_probs=34.2

Q ss_pred             cccCCeEEEEcCCChhHHHHHHHHHHcCCceEEEEecCC
Q 017760            8 GIEGKTFLVTGGLGHVGSALCLELVRRGAYQVRAFDLRT   46 (366)
Q Consensus         8 ~~~~~~VlITGgtGfiG~~L~~~L~~~g~~~V~~~dr~~   46 (366)
                      .+++++++||||+|++|+++++.|.++|+ +|++++|+.
T Consensus         3 ~l~~k~vlVTGas~giG~~ia~~l~~~G~-~V~~~~r~~   40 (253)
T 1hxh_A            3 RLQGKVALVTGGASGVGLEVVKLLLGEGA-KVAFSDINE   40 (253)
T ss_dssp             TTTTCEEEETTTTSHHHHHHHHHHHHTTC-EEEEECSCH
T ss_pred             CCCCCEEEEeCCCcHHHHHHHHHHHHCCC-EEEEEeCCH
Confidence            35678999999999999999999999995 899999875

>3orf_A Dihydropteridine reductase; alpha-beta-alpha sandwich, rossmann fold, oxidoreductase (AC NADH), NADH binding, oxidoreductase; HET: NAD; 2.16A {Dictyostelium discoideum}

Probab=98.50  E-value=3.7e-07  Score=82.24  Aligned_cols=37  Identities=27%  Similarity=0.442  Sum_probs=33.9

Q ss_pred             CCeEEEEcCCChhHHHHHHHHHHcCCceEEEEecCCCC
Q 017760           11 GKTFLVTGGLGHVGSALCLELVRRGAYQVRAFDLRTNS   48 (366)
Q Consensus        11 ~~~VlITGgtGfiG~~L~~~L~~~g~~~V~~~dr~~~~   48 (366)
                      +++|+||||+|++|+++++.|+++|+ +|++++|+...
T Consensus        22 ~k~vlITGas~gIG~~la~~l~~~G~-~V~~~~r~~~~   58 (251)
T 3orf_A           22 SKNILVLGGSGALGAEVVKFFKSKSW-NTISIDFRENP   58 (251)
T ss_dssp             CCEEEEETTTSHHHHHHHHHHHHTTC-EEEEEESSCCT
T ss_pred             CCEEEEECCCCHHHHHHHHHHHHCCC-EEEEEeCCccc
Confidence            57899999999999999999999995 89999998754

>4e4y_A Short chain dehydrogenase family protein; structural genomics, the center for structural genomics of I diseases, csgid, niaid; 1.80A {Francisella tularensis subsp}

Probab=98.49  E-value=3.1e-07  Score=82.35  Aligned_cols=37  Identities=27%  Similarity=0.437  Sum_probs=32.7

Q ss_pred             cCCeEEEEcCCChhHHHHHHHHHH-cCCceEEEEecCCC
Q 017760           10 EGKTFLVTGGLGHVGSALCLELVR-RGAYQVRAFDLRTN   47 (366)
Q Consensus        10 ~~~~VlITGgtGfiG~~L~~~L~~-~g~~~V~~~dr~~~   47 (366)
                      ++++++||||+|.||+++++.|.+ .| ++|++.+++..
T Consensus         3 ~~k~vlITGas~gIG~~~a~~l~~~~g-~~v~~~~~~~~   40 (244)
T 4e4y_A            3 AMANYLVTGGSKGIGKAVVELLLQNKN-HTVINIDIQQS   40 (244)
T ss_dssp             CCEEEEEETTTSHHHHHHHHHHTTSTT-EEEEEEESSCC
T ss_pred             CCCeEEEeCCCChHHHHHHHHHHhcCC-cEEEEeccccc
Confidence            457899999999999999999999 67 58999988765

>3edm_A Short chain dehydrogenase; structural genomics, oxidoreductase, PSI-2, P structure initiative; 2.30A {Agrobacterium tumefaciens str}

Probab=98.49  E-value=5.3e-07  Score=81.64  Aligned_cols=57  Identities=16%  Similarity=0.200  Sum_probs=41.5

Q ss_pred             cccCCeEEEEcCCChhHHHHHHHHHHcCCceEEEEecCCCCccc---ccc--cCCCeEEEEcc
Q 017760            8 GIEGKTFLVTGGLGHVGSALCLELVRRGAYQVRAFDLRTNSPWS---HLL--INHGVHCIQGL   65 (366)
Q Consensus         8 ~~~~~~VlITGgtGfiG~~L~~~L~~~g~~~V~~~dr~~~~~~~---~~~--~~~~v~~i~gD   65 (366)
                      .+++++++||||+|.||+++++.|.++|+ +|++.+++......   ..+  ....+.++++|
T Consensus         5 ~l~~k~vlVTGas~GIG~aia~~la~~G~-~V~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~D   66 (259)
T 3edm_A            5 RFTNRTIVVAGAGRDIGRACAIRFAQEGA-NVVLTYNGAAEGAATAVAEIEKLGRSALAIKAD   66 (259)
T ss_dssp             TTTTCEEEEETTTSHHHHHHHHHHHHTTC-EEEEEECSSCHHHHHHHHHHHTTTSCCEEEECC
T ss_pred             CCCCCEEEEECCCchHHHHHHHHHHHCCC-EEEEEcCCCHHHHHHHHHHHHhcCCceEEEEcC
Confidence            35678999999999999999999999995 89998555432211   111  13457777888

>3oig_A Enoyl-[acyl-carrier-protein] reductase [NADH]; fatty acid synthesis, rossmann-like fold, enoyl-ACP reductas binding; HET: NAD IMJ; 1.25A {Bacillus subtilis} SCOP: c.2.1.2 PDB: 3oif_A* 2qio_A* 3oje_A 3ojf_A*

Probab=98.49  E-value=4.8e-07  Score=82.08  Aligned_cols=56  Identities=18%  Similarity=0.147  Sum_probs=42.0

Q ss_pred             ccCCeEEEEcCCCh--hHHHHHHHHHHcCCceEEEEecCCCCccc-c----cccCCCeEEEEcc
Q 017760            9 IEGKTFLVTGGLGH--VGSALCLELVRRGAYQVRAFDLRTNSPWS-H----LLINHGVHCIQGL   65 (366)
Q Consensus         9 ~~~~~VlITGgtGf--iG~~L~~~L~~~g~~~V~~~dr~~~~~~~-~----~~~~~~v~~i~gD   65 (366)
                      +++++++||||+|+  ||+++++.|+++|+ +|++++|+...... .    .....++.++++|
T Consensus         5 l~~k~vlVTGasg~~GIG~~ia~~l~~~G~-~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~D   67 (266)
T 3oig_A            5 LEGRNIVVMGVANKRSIAWGIARSLHEAGA-RLIFTYAGERLEKSVHELAGTLDRNDSIILPCD   67 (266)
T ss_dssp             CTTCEEEEECCCSTTSHHHHHHHHHHHTTC-EEEEEESSGGGHHHHHHHHHTSSSCCCEEEECC
T ss_pred             cCCCEEEEEcCCCCCcHHHHHHHHHHHCCC-EEEEecCchHHHHHHHHHHHhcCCCCceEEeCC
Confidence            56789999999999  99999999999995 89999887432111 1    1112367788888

>4fc7_A Peroxisomal 2,4-dienoyl-COA reductase; SDR/rossmann fold, peroxisomal beta-oxidation, oxidoreductas; HET: NAP COA; 1.84A {Homo sapiens} PDB: 4fc6_A*

Probab=98.49  E-value=7.5e-08  Score=88.23  Aligned_cols=56  Identities=14%  Similarity=0.138  Sum_probs=42.7

Q ss_pred             ccCCeEEEEcCCChhHHHHHHHHHHcCCceEEEEecCCCCccc--ccc---cCCCeEEEEcc
Q 017760            9 IEGKTFLVTGGLGHVGSALCLELVRRGAYQVRAFDLRTNSPWS--HLL---INHGVHCIQGL   65 (366)
Q Consensus         9 ~~~~~VlITGgtGfiG~~L~~~L~~~g~~~V~~~dr~~~~~~~--~~~---~~~~v~~i~gD   65 (366)
                      +++++++||||+|.||+++++.|++.|+ +|++.+|+......  ..+   ...++.++++|
T Consensus        25 l~~k~~lVTGas~GIG~aia~~l~~~G~-~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~D   85 (277)
T 4fc7_A           25 LRDKVAFITGGGSGIGFRIAEIFMRHGC-HTVIASRSLPRVLTAARKLAGATGRRCLPLSMD   85 (277)
T ss_dssp             TTTCEEEEETTTSHHHHHHHHHHHTTTC-EEEEEESCHHHHHHHHHHHHHHHSSCEEEEECC
T ss_pred             cCCCEEEEeCCCchHHHHHHHHHHHCCC-EEEEEeCCHHHHHHHHHHHHHhcCCcEEEEEcC
Confidence            5678999999999999999999999995 89999987532111  111   13467778888

>3t4x_A Oxidoreductase, short chain dehydrogenase/reducta; structural genomics, center for structural genomics of infec diseases, csgid; 2.80A {Bacillus anthracis}

Probab=98.49  E-value=2.5e-07  Score=84.21  Aligned_cols=38  Identities=39%  Similarity=0.533  Sum_probs=34.3

Q ss_pred             ccCCeEEEEcCCChhHHHHHHHHHHcCCceEEEEecCCC
Q 017760            9 IEGKTFLVTGGLGHVGSALCLELVRRGAYQVRAFDLRTN   47 (366)
Q Consensus         9 ~~~~~VlITGgtGfiG~~L~~~L~~~g~~~V~~~dr~~~   47 (366)
                      +++++++||||+|.||++++++|.+.|+ +|++.+|+..
T Consensus         8 l~~k~~lVTGas~gIG~aia~~l~~~G~-~V~~~~r~~~   45 (267)
T 3t4x_A            8 LKGKTALVTGSTAGIGKAIATSLVAEGA-NVLINGRREE   45 (267)
T ss_dssp             CTTCEEEETTCSSHHHHHHHHHHHHTTC-EEEEEESSHH
T ss_pred             cCCCEEEEeCCCcHHHHHHHHHHHHCCC-EEEEEeCCHH
Confidence            4568999999999999999999999995 8999998753

>3u5t_A 3-oxoacyl-[acyl-carrier-protein] reductase; structural genomics, PSI-biology, NEW YORK structural genomi research consortium, nysgrc; 2.40A {Sinorhizobium meliloti}

Probab=98.47  E-value=5e-07  Score=82.32  Aligned_cols=56  Identities=18%  Similarity=0.075  Sum_probs=39.9

Q ss_pred             ccCCeEEEEcCCChhHHHHHHHHHHcCCceEEEEecCCCCccc---cc--ccCCCeEEEEcc
Q 017760            9 IEGKTFLVTGGLGHVGSALCLELVRRGAYQVRAFDLRTNSPWS---HL--LINHGVHCIQGL   65 (366)
Q Consensus         9 ~~~~~VlITGgtGfiG~~L~~~L~~~g~~~V~~~dr~~~~~~~---~~--~~~~~v~~i~gD   65 (366)
                      .++++++||||+|.||+++++.|.+.|+ +|++.+++......   ..  .....+.++++|
T Consensus        25 ~~~k~~lVTGas~GIG~aia~~la~~G~-~Vv~~~~~~~~~~~~~~~~~~~~~~~~~~~~~D   85 (267)
T 3u5t_A           25 ETNKVAIVTGASRGIGAAIAARLASDGF-TVVINYAGKAAAAEEVAGKIEAAGGKALTAQAD   85 (267)
T ss_dssp             --CCEEEEESCSSHHHHHHHHHHHHHTC-EEEEEESSCSHHHHHHHHHHHHTTCCEEEEECC
T ss_pred             cCCCEEEEeCCCCHHHHHHHHHHHHCCC-EEEEEcCCCHHHHHHHHHHHHhcCCeEEEEEcC
Confidence            3467899999999999999999999995 89988665432211   00  113467778888

>1sby_A Alcohol dehydrogenase; ternary complex, NAD, trifluoroethanol, oxidoreductase; HET: NAD; 1.10A {Scaptodrosophila lebanonensis} SCOP: c.2.1.2 PDB: 1b14_A* 1b15_A* 1a4u_A* 1b2l_A* 1b16_A* 3rj5_A* 3rj9_A* 1mg5_A*

Probab=98.46  E-value=9.1e-08  Score=86.27  Aligned_cols=39  Identities=26%  Similarity=0.374  Sum_probs=34.0

Q ss_pred             ccCCeEEEEcCCChhHHHHHHHHHHcCCceEEEEecCCC
Q 017760            9 IEGKTFLVTGGLGHVGSALCLELVRRGAYQVRAFDLRTN   47 (366)
Q Consensus         9 ~~~~~VlITGgtGfiG~~L~~~L~~~g~~~V~~~dr~~~   47 (366)
                      +++++++||||+|+||++++++|+++|++.|++++|+..
T Consensus         3 l~~k~vlVtGas~gIG~~~a~~l~~~G~~~v~~~~r~~~   41 (254)
T 1sby_A            3 LTNKNVIFVAALGGIGLDTSRELVKRNLKNFVILDRVEN   41 (254)
T ss_dssp             CTTCEEEEETTTSHHHHHHHHHHHHTCCSEEEEEESSCC
T ss_pred             CCCcEEEEECCCChHHHHHHHHHHHCCCcEEEEEecCch
Confidence            467899999999999999999999999523999998763

>2bd0_A Sepiapterin reductase; oxidoreductase; HET: NAP BIO; 1.70A {Chlorobium tepidum} SCOP: c.2.1.2

Probab=98.45  E-value=2.8e-07  Score=82.32  Aligned_cols=36  Identities=22%  Similarity=0.283  Sum_probs=31.9

Q ss_pred             CCeEEEEcCCChhHHHHHHHHHHcCCc------eEEEEecCC
Q 017760           11 GKTFLVTGGLGHVGSALCLELVRRGAY------QVRAFDLRT   46 (366)
Q Consensus        11 ~~~VlITGgtGfiG~~L~~~L~~~g~~------~V~~~dr~~   46 (366)
                      +++|+||||+|++|+++++.|+++|+.      +|++++|++
T Consensus         2 ~k~vlITGasggiG~~la~~l~~~G~~~~~~~~~V~~~~r~~   43 (244)
T 2bd0_A            2 KHILLITGAGKGIGRAIALEFARAARHHPDFEPVLVLSSRTA   43 (244)
T ss_dssp             CEEEEEETTTSHHHHHHHHHHHHHTTTCTTCCEEEEEEESCH
T ss_pred             CCEEEEECCCChHHHHHHHHHHHhcCcccccceEEEEEeCCH
Confidence            468999999999999999999999942      799999874

>3rd5_A Mypaa.01249.C; ssgcid, structural genomics, seattle structural genomics CEN infectious disease, oxidoreductase; HET: EPE; 1.50A {Mycobacterium paratuberculosis}

Probab=98.45  E-value=4.5e-07  Score=83.54  Aligned_cols=58  Identities=22%  Similarity=0.170  Sum_probs=43.3

Q ss_pred             ccccCCeEEEEcCCChhHHHHHHHHHHcCCceEEEEecCCCCccc-ccccCCCeEEEEcc
Q 017760            7 EGIEGKTFLVTGGLGHVGSALCLELVRRGAYQVRAFDLRTNSPWS-HLLINHGVHCIQGL   65 (366)
Q Consensus         7 ~~~~~~~VlITGgtGfiG~~L~~~L~~~g~~~V~~~dr~~~~~~~-~~~~~~~v~~i~gD   65 (366)
                      ..+++++++||||+|+||+++++.|+++|+ +|++++|+...... ......+++++++|
T Consensus        12 ~~l~gk~vlVTGas~gIG~~~a~~L~~~G~-~V~~~~r~~~~~~~~~~~~~~~~~~~~~D   70 (291)
T 3rd5_A           12 PSFAQRTVVITGANSGLGAVTARELARRGA-TVIMAVRDTRKGEAAARTMAGQVEVRELD   70 (291)
T ss_dssp             CCCTTCEEEEECCSSHHHHHHHHHHHHTTC-EEEEEESCHHHHHHHHTTSSSEEEEEECC
T ss_pred             cCCCCCEEEEeCCCChHHHHHHHHHHHCCC-EEEEEECCHHHHHHHHHHhcCCeeEEEcC
Confidence            345678999999999999999999999995 89999988543211 11113456777777

>3v8b_A Putative dehydrogenase, possibly 3-oxoacyl-[acyl- protein] reductase; PSI-biology, structural genomics, protein structure initiati nysgrc; 2.70A {Sinorhizobium meliloti}

Probab=98.44  E-value=3.9e-07  Score=83.73  Aligned_cols=56  Identities=18%  Similarity=0.166  Sum_probs=41.5

Q ss_pred             ccCCeEEEEcCCChhHHHHHHHHHHcCCceEEEEecCCCCccc--ccc--cCCCeEEEEcc
Q 017760            9 IEGKTFLVTGGLGHVGSALCLELVRRGAYQVRAFDLRTNSPWS--HLL--INHGVHCIQGL   65 (366)
Q Consensus         9 ~~~~~VlITGgtGfiG~~L~~~L~~~g~~~V~~~dr~~~~~~~--~~~--~~~~v~~i~gD   65 (366)
                      +++++++||||+|.||+++++.|.+.|+ +|++++|+......  ..+  ...++.++++|
T Consensus        26 ~~~k~~lVTGas~GIG~aia~~la~~G~-~V~~~~r~~~~~~~~~~~l~~~~~~~~~~~~D   85 (283)
T 3v8b_A           26 QPSPVALITGAGSGIGRATALALAADGV-TVGALGRTRTEVEEVADEIVGAGGQAIALEAD   85 (283)
T ss_dssp             -CCCEEEEESCSSHHHHHHHHHHHHTTC-EEEEEESSHHHHHHHHHHHTTTTCCEEEEECC
T ss_pred             CCCCEEEEECCCCHHHHHHHHHHHHCCC-EEEEEeCCHHHHHHHHHHHHhcCCcEEEEEcc
Confidence            3467899999999999999999999996 89999987532111  111  12457777777

>3nrc_A Enoyl-[acyl-carrier-protein] reductase (NADH); rossmann fold, NADH BI oxidoreductase; HET: NAD TCL; 2.10A {Francisella tularensis subsp} PDB: 3uic_A* 2jjy_A*

Probab=98.44  E-value=3.7e-07  Score=83.67  Aligned_cols=57  Identities=18%  Similarity=0.156  Sum_probs=42.1

Q ss_pred             cccCCeEEEEcCCCh--hHHHHHHHHHHcCCceEEEEecCCCCcccccc--cCCCeEEEEcc
Q 017760            8 GIEGKTFLVTGGLGH--VGSALCLELVRRGAYQVRAFDLRTNSPWSHLL--INHGVHCIQGL   65 (366)
Q Consensus         8 ~~~~~~VlITGgtGf--iG~~L~~~L~~~g~~~V~~~dr~~~~~~~~~~--~~~~v~~i~gD   65 (366)
                      .+++++++||||+|+  ||.++++.|+++|+ +|++++|+........+  ...++.++.+|
T Consensus        23 ~l~~k~vlVTGasg~~GIG~~ia~~l~~~G~-~V~~~~r~~~~~~~~~l~~~~~~~~~~~~D   83 (280)
T 3nrc_A           23 FLAGKKILITGLLSNKSIAYGIAKAMHREGA-ELAFTYVGQFKDRVEKLCAEFNPAAVLPCD   83 (280)
T ss_dssp             TTTTCEEEECCCCSTTCHHHHHHHHHHHTTC-EEEEEECTTCHHHHHHHHGGGCCSEEEECC
T ss_pred             ccCCCEEEEECCCCCCCHHHHHHHHHHHcCC-EEEEeeCchHHHHHHHHHHhcCCceEEEee
Confidence            355689999999988  99999999999995 89999998721111111  12346777777

>2b4q_A Rhamnolipids biosynthesis 3-oxoacyl-[acyl- carrier-protein] reductase; RHLG-NADP complex, oxidoreductase; HET: NAP; 2.30A {Pseudomonas aeruginosa}

Probab=98.43  E-value=2.4e-07  Score=84.85  Aligned_cols=37  Identities=30%  Similarity=0.455  Sum_probs=33.6

Q ss_pred             ccCCeEEEEcCCChhHHHHHHHHHHcCCceEEEEecCC
Q 017760            9 IEGKTFLVTGGLGHVGSALCLELVRRGAYQVRAFDLRT   46 (366)
Q Consensus         9 ~~~~~VlITGgtGfiG~~L~~~L~~~g~~~V~~~dr~~   46 (366)
                      +++++++||||+|+||+++++.|+++|+ +|++++|+.
T Consensus        27 l~~k~vlVTGas~gIG~aia~~L~~~G~-~V~~~~r~~   63 (276)
T 2b4q_A           27 LAGRIALVTGGSRGIGQMIAQGLLEAGA-RVFICARDA   63 (276)
T ss_dssp             CTTCEEEEETTTSHHHHHHHHHHHHTTC-EEEEECSCH
T ss_pred             CCCCEEEEeCCCChHHHHHHHHHHHCCC-EEEEEeCCH
Confidence            4568999999999999999999999995 899999875

>3oec_A Carveol dehydrogenase (mytha.01326.C, A0R518 HOMO; ssgcid, structural genomics; 1.95A {Mycobacterium thermoresistibile}

Probab=98.43  E-value=1.3e-06  Score=81.51  Aligned_cols=37  Identities=30%  Similarity=0.500  Sum_probs=33.6

Q ss_pred             ccCCeEEEEcCCChhHHHHHHHHHHcCCceEEEEecCC
Q 017760            9 IEGKTFLVTGGLGHVGSALCLELVRRGAYQVRAFDLRT   46 (366)
Q Consensus         9 ~~~~~VlITGgtGfiG~~L~~~L~~~g~~~V~~~dr~~   46 (366)
                      +++++++||||+|.||+++++.|++.|+ +|+++|++.
T Consensus        44 l~gk~~lVTGas~GIG~aia~~la~~G~-~Vv~~~~~~   80 (317)
T 3oec_A           44 LQGKVAFITGAARGQGRTHAVRLAQDGA-DIVAIDLCR   80 (317)
T ss_dssp             TTTCEEEESSCSSHHHHHHHHHHHHTTC-EEEEEECCC
T ss_pred             cCCCEEEEeCCCcHHHHHHHHHHHHCCC-eEEEEeccc
Confidence            4568999999999999999999999995 899999874

>3v2g_A 3-oxoacyl-[acyl-carrier-protein] reductase; structural genomics, PSI-biology, protein structure initiati nysgrc; 2.30A {Sinorhizobium meliloti}

Probab=98.43  E-value=5.1e-07  Score=82.45  Aligned_cols=56  Identities=25%  Similarity=0.286  Sum_probs=41.5

Q ss_pred             ccCCeEEEEcCCChhHHHHHHHHHHcCCceEEEEecCCCCccc---ccc--cCCCeEEEEcc
Q 017760            9 IEGKTFLVTGGLGHVGSALCLELVRRGAYQVRAFDLRTNSPWS---HLL--INHGVHCIQGL   65 (366)
Q Consensus         9 ~~~~~VlITGgtGfiG~~L~~~L~~~g~~~V~~~dr~~~~~~~---~~~--~~~~v~~i~gD   65 (366)
                      +++++++||||+|.||+++++.|++.|+ +|++.+++......   ..+  ....+.++++|
T Consensus        29 l~gk~~lVTGas~GIG~aia~~la~~G~-~V~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~D   89 (271)
T 3v2g_A           29 LAGKTAFVTGGSRGIGAAIAKRLALEGA-AVALTYVNAAERAQAVVSEIEQAGGRAVAIRAD   89 (271)
T ss_dssp             CTTCEEEEETTTSHHHHHHHHHHHHTTC-EEEEEESSCHHHHHHHHHHHHHTTCCEEEEECC
T ss_pred             CCCCEEEEeCCCcHHHHHHHHHHHHCCC-EEEEEeCCCHHHHHHHHHHHHhcCCcEEEEECC
Confidence            3568899999999999999999999995 89999776532111   111  13467778888

>1xhl_A Short-chain dehydrogenase/reductase family member putative tropinone reductase-II...; parallel beta-sheet of seven strands in the order 3214567; HET: NDP TNE; 2.40A {Caenorhabditis elegans} SCOP: c.2.1.2

Probab=98.42  E-value=8.4e-08  Score=88.89  Aligned_cols=37  Identities=24%  Similarity=0.443  Sum_probs=33.6

Q ss_pred             ccCCeEEEEcCCChhHHHHHHHHHHcCCceEEEEecCC
Q 017760            9 IEGKTFLVTGGLGHVGSALCLELVRRGAYQVRAFDLRT   46 (366)
Q Consensus         9 ~~~~~VlITGgtGfiG~~L~~~L~~~g~~~V~~~dr~~   46 (366)
                      +++++++||||+|+||+++++.|+++|+ +|++++|+.
T Consensus        24 l~~k~vlVTGas~gIG~aia~~L~~~G~-~V~~~~r~~   60 (297)
T 1xhl_A           24 FSGKSVIITGSSNGIGRSAAVIFAKEGA-QVTITGRNE   60 (297)
T ss_dssp             CTTCEEEETTCSSHHHHHHHHHHHHTTC-EEEEEESCH
T ss_pred             CCCCEEEEeCCCcHHHHHHHHHHHHCCC-EEEEEeCCH
Confidence            4568899999999999999999999995 899999875

>1qsg_A Enoyl-[acyl-carrier-protein] reductase; enoyl reductase, oxidoreductase; HET: GLC NAD TCL; 1.75A {Escherichia coli} SCOP: c.2.1.2 PDB: 1c14_A* 1i2z_A* 1i30_A* 1lx6_A* 1lxc_A* 1mfp_A* 2fhs_A 1qg6_A* 1dfg_A* 1dfh_A* 1d8a_A* 1dfi_A* 3pje_A* 3pjd_A* 3pjf_A*

Probab=98.42  E-value=5.8e-07  Score=81.54  Aligned_cols=37  Identities=24%  Similarity=0.309  Sum_probs=33.6

Q ss_pred             ccCCeEEEEcCC--ChhHHHHHHHHHHcCCceEEEEecCC
Q 017760            9 IEGKTFLVTGGL--GHVGSALCLELVRRGAYQVRAFDLRT   46 (366)
Q Consensus         9 ~~~~~VlITGgt--GfiG~~L~~~L~~~g~~~V~~~dr~~   46 (366)
                      +++++++||||+  |+||+++++.|.++|+ +|++++|+.
T Consensus         7 l~~k~vlVTGas~~~gIG~~ia~~l~~~G~-~V~~~~r~~   45 (265)
T 1qsg_A            7 LSGKRILVTGVASKLSIAYGIAQAMHREGA-ELAFTYQND   45 (265)
T ss_dssp             TTTCEEEECCCCSTTSHHHHHHHHHHHTTC-EEEEEESST
T ss_pred             cCCCEEEEECCCCCCCHHHHHHHHHHHCCC-EEEEEcCcH
Confidence            456889999999  9999999999999995 899999875

>1geg_A Acetoin reductase; SDR family, oxidoreductase; HET: GLC NAD; 1.70A {Klebsiella pneumoniae} SCOP: c.2.1.2

Probab=98.41  E-value=2.4e-07  Score=83.63  Aligned_cols=35  Identities=37%  Similarity=0.463  Sum_probs=32.2

Q ss_pred             CCeEEEEcCCChhHHHHHHHHHHcCCceEEEEecCC
Q 017760           11 GKTFLVTGGLGHVGSALCLELVRRGAYQVRAFDLRT   46 (366)
Q Consensus        11 ~~~VlITGgtGfiG~~L~~~L~~~g~~~V~~~dr~~   46 (366)
                      +++++||||+|++|+++++.|+++|+ +|++++|++
T Consensus         2 ~k~vlVTGas~gIG~~ia~~l~~~G~-~V~~~~r~~   36 (256)
T 1geg_A            2 KKVALVTGAGQGIGKAIALRLVKDGF-AVAIADYND   36 (256)
T ss_dssp             CCEEEEETTTSHHHHHHHHHHHHTTC-EEEEEESCH
T ss_pred             CCEEEEECCCChHHHHHHHHHHHCCC-EEEEEeCCH
Confidence            46899999999999999999999995 899999875

>3tjr_A Short chain dehydrogenase; structural genomics, seattle structural genomics center for infectious disease, ssgcid, SCD, NAD; HET: UNL; 1.60A {Mycobacterium avium subsp}

Probab=98.41  E-value=1.5e-07  Score=87.29  Aligned_cols=56  Identities=27%  Similarity=0.348  Sum_probs=42.1

Q ss_pred             ccCCeEEEEcCCChhHHHHHHHHHHcCCceEEEEecCCCCccc--ccc--cCCCeEEEEcc
Q 017760            9 IEGKTFLVTGGLGHVGSALCLELVRRGAYQVRAFDLRTNSPWS--HLL--INHGVHCIQGL   65 (366)
Q Consensus         9 ~~~~~VlITGgtGfiG~~L~~~L~~~g~~~V~~~dr~~~~~~~--~~~--~~~~v~~i~gD   65 (366)
                      +++++++||||+|.||+++++.|+++|+ +|++++|+......  ..+  ...++.++++|
T Consensus        29 l~gk~vlVTGas~gIG~~la~~l~~~G~-~V~~~~r~~~~~~~~~~~l~~~~~~~~~~~~D   88 (301)
T 3tjr_A           29 FDGRAAVVTGGASGIGLATATEFARRGA-RLVLSDVDQPALEQAVNGLRGQGFDAHGVVCD   88 (301)
T ss_dssp             STTCEEEEETTTSHHHHHHHHHHHHTTC-EEEEEESCHHHHHHHHHHHHHTTCCEEEEECC
T ss_pred             cCCCEEEEeCCCCHHHHHHHHHHHHCCC-EEEEEECCHHHHHHHHHHHHhcCCceEEEEcc
Confidence            3467899999999999999999999995 89999987543211  011  13467777887

>3ek2_A Enoyl-(acyl-carrier-protein) reductase (NADH); ssgcid, oxidoreductase, structural genomics; 1.90A {Burkholderia pseudomallei 1710B} SCOP: c.2.1.2

Probab=98.41  E-value=4e-07  Score=82.61  Aligned_cols=39  Identities=23%  Similarity=0.293  Sum_probs=34.8

Q ss_pred             ccccCCeEEEEcCC--ChhHHHHHHHHHHcCCceEEEEecCC
Q 017760            7 EGIEGKTFLVTGGL--GHVGSALCLELVRRGAYQVRAFDLRT   46 (366)
Q Consensus         7 ~~~~~~~VlITGgt--GfiG~~L~~~L~~~g~~~V~~~dr~~   46 (366)
                      ...++++|+||||+  |.||+++++.|+++|+ +|++++|+.
T Consensus        10 ~~~~~k~vlITGa~~~~giG~~ia~~l~~~G~-~V~~~~r~~   50 (271)
T 3ek2_A           10 GFLDGKRILLTGLLSNRSIAYGIAKACKREGA-ELAFTYVGD   50 (271)
T ss_dssp             CTTTTCEEEECCCCSTTSHHHHHHHHHHHTTC-EEEEEESSG
T ss_pred             cccCCCEEEEeCCCCCCcHHHHHHHHHHHcCC-CEEEEecch
Confidence            34567999999999  9999999999999995 899999874

>3rwb_A TPLDH, pyridoxal 4-dehydrogenase; short chain dehydrogenase/reductase, 4-pyridoxola NAD+, oxidoreductase; HET: NAD 4PL; 1.70A {Mesorhizobium loti} PDB: 3ndr_A* 3nug_A*

Probab=98.40  E-value=1.2e-07  Score=85.39  Aligned_cols=58  Identities=29%  Similarity=0.363  Sum_probs=42.6

Q ss_pred             ccccCCeEEEEcCCChhHHHHHHHHHHcCCceEEEEecCCCCccc-ccccCCCeEEEEcc
Q 017760            7 EGIEGKTFLVTGGLGHVGSALCLELVRRGAYQVRAFDLRTNSPWS-HLLINHGVHCIQGL   65 (366)
Q Consensus         7 ~~~~~~~VlITGgtGfiG~~L~~~L~~~g~~~V~~~dr~~~~~~~-~~~~~~~v~~i~gD   65 (366)
                      +.+++++++||||+|.||+++++.|.+.|+ +|++++|+...... ......++.++++|
T Consensus         2 ~~l~gk~vlVTGas~gIG~a~a~~l~~~G~-~V~~~~r~~~~~~~~~~~~~~~~~~~~~D   60 (247)
T 3rwb_A            2 ERLAGKTALVTGAAQGIGKAIAARLAADGA-TVIVSDINAEGAKAAAASIGKKARAIAAD   60 (247)
T ss_dssp             CTTTTCEEEEETTTSHHHHHHHHHHHHTTC-EEEEECSCHHHHHHHHHHHCTTEEECCCC
T ss_pred             CCcCCCEEEEECCCCHHHHHHHHHHHHCCC-EEEEEeCCHHHHHHHHHHhCCceEEEEcC
Confidence            346778999999999999999999999995 89999987532111 00113456666666

>2ekp_A 2-deoxy-D-gluconate 3-dehydrogenase; structural genomics, NPPSFA, nation project on protein structural and functional analyses; HET: NAD; 1.15A {Thermus thermophilus} PDB: 1x1e_A* 2ekq_A

Probab=98.40  E-value=5.7e-07  Score=80.31  Aligned_cols=36  Identities=33%  Similarity=0.440  Sum_probs=32.7

Q ss_pred             CCeEEEEcCCChhHHHHHHHHHHcCCceEEEEecCCC
Q 017760           11 GKTFLVTGGLGHVGSALCLELVRRGAYQVRAFDLRTN   47 (366)
Q Consensus        11 ~~~VlITGgtGfiG~~L~~~L~~~g~~~V~~~dr~~~   47 (366)
                      +++++||||+|++|+++++.|.++|+ +|++++|++.
T Consensus         2 ~k~vlVTGas~giG~~~a~~l~~~G~-~V~~~~r~~~   37 (239)
T 2ekp_A            2 ERKALVTGGSRGIGRAIAEALVARGY-RVAIASRNPE   37 (239)
T ss_dssp             CCEEEEETTTSHHHHHHHHHHHHTTC-EEEEEESSCH
T ss_pred             CCEEEEeCCCcHHHHHHHHHHHHCCC-EEEEEeCCHH
Confidence            47899999999999999999999995 8999998753

>3uve_A Carveol dehydrogenase ((+)-trans-carveol dehydrog; ssgcid, structural genomics, seattle structural genomics CEN infectious disease; HET: NAD PG4; 1.55A {Mycobacterium avium} SCOP: c.2.1.0 PDB: 3uwr_A*

Probab=98.38  E-value=4e-06  Score=76.85  Aligned_cols=38  Identities=32%  Similarity=0.491  Sum_probs=34.4

Q ss_pred             cccCCeEEEEcCCChhHHHHHHHHHHcCCceEEEEecCC
Q 017760            8 GIEGKTFLVTGGLGHVGSALCLELVRRGAYQVRAFDLRT   46 (366)
Q Consensus         8 ~~~~~~VlITGgtGfiG~~L~~~L~~~g~~~V~~~dr~~   46 (366)
                      .+++++++||||+|.||+++++.|.+.|+ +|+++|+++
T Consensus         8 ~l~~k~~lVTGas~gIG~aia~~la~~G~-~V~~~~~~~   45 (286)
T 3uve_A            8 RVEGKVAFVTGAARGQGRSHAVRLAQEGA-DIIAVDICK   45 (286)
T ss_dssp             TTTTCEEEEESTTSHHHHHHHHHHHHTTC-EEEEEECCS
T ss_pred             ccCCCEEEEeCCCchHHHHHHHHHHHCCC-eEEEEeccc
Confidence            35678999999999999999999999995 899999874

>3k31_A Enoyl-(acyl-carrier-protein) reductase; ssgcid, NIH, niaid, SBRI, UW, decode, eonyl-(acyl-carrier-PR reductase, NAD, oxidoreductase; HET: NAD; 1.80A {Anaplasma phagocytophilum} PDB: 3k2e_A*

Probab=98.37  E-value=1.3e-06  Score=80.71  Aligned_cols=56  Identities=16%  Similarity=0.065  Sum_probs=40.7

Q ss_pred             ccCCeEEEEcCCC--hhHHHHHHHHHHcCCceEEEEecCCCCccc-ccc--cCCCeEEEEcc
Q 017760            9 IEGKTFLVTGGLG--HVGSALCLELVRRGAYQVRAFDLRTNSPWS-HLL--INHGVHCIQGL   65 (366)
Q Consensus         9 ~~~~~VlITGgtG--fiG~~L~~~L~~~g~~~V~~~dr~~~~~~~-~~~--~~~~v~~i~gD   65 (366)
                      +++++++||||+|  .||+++++.|++.|+ +|++.+|+...... ...  ....+.++++|
T Consensus        28 l~~k~vlVTGasg~~GIG~~ia~~la~~G~-~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~D   88 (296)
T 3k31_A           28 MEGKKGVIIGVANDKSLAWGIAKAVCAQGA-EVALTYLSETFKKRVDPLAESLGVKLTVPCD   88 (296)
T ss_dssp             TTTCEEEEECCCSTTSHHHHHHHHHHHTTC-EEEEEESSGGGHHHHHHHHHHHTCCEEEECC
T ss_pred             cCCCEEEEEeCCCCCCHHHHHHHHHHHCCC-EEEEEeCChHHHHHHHHHHHhcCCeEEEEcC
Confidence            4568999999998  999999999999995 89999988532111 000  11345677777

>2ehd_A Oxidoreductase, oxidoreductase, short-chain dehydrogenase/reducta; rossman fold, structural genomics, NPPSFA; 2.40A {Thermus thermophilus}

Probab=98.37  E-value=4.8e-07  Score=80.31  Aligned_cols=35  Identities=23%  Similarity=0.260  Sum_probs=32.1

Q ss_pred             CCeEEEEcCCChhHHHHHHHHHHcCCceEEEEecCC
Q 017760           11 GKTFLVTGGLGHVGSALCLELVRRGAYQVRAFDLRT   46 (366)
Q Consensus        11 ~~~VlITGgtGfiG~~L~~~L~~~g~~~V~~~dr~~   46 (366)
                      +++|+||||+|++|+++++.|+++|+ +|++++|++
T Consensus         5 ~k~vlVtGasggiG~~~a~~l~~~G~-~V~~~~r~~   39 (234)
T 2ehd_A            5 KGAVLITGASRGIGEATARLLHAKGY-RVGLMARDE   39 (234)
T ss_dssp             CCEEEESSTTSHHHHHHHHHHHHTTC-EEEEEESCH
T ss_pred             CCEEEEECCCcHHHHHHHHHHHHCCC-EEEEEECCH
Confidence            46899999999999999999999995 899999874

>3p19_A BFPVVD8, putative blue fluorescent protein; rossmann-fold, oxidoreductase; HET: NAP; 2.05A {Vibrio vulnificus}

Probab=98.36  E-value=2.5e-07  Score=84.30  Aligned_cols=54  Identities=19%  Similarity=0.199  Sum_probs=41.5

Q ss_pred             ccCCeEEEEcCCChhHHHHHHHHHHcCCceEEEEecCCCCcccccccCCCeEEEEcc
Q 017760            9 IEGKTFLVTGGLGHVGSALCLELVRRGAYQVRAFDLRTNSPWSHLLINHGVHCIQGL   65 (366)
Q Consensus         9 ~~~~~VlITGgtGfiG~~L~~~L~~~g~~~V~~~dr~~~~~~~~~~~~~~v~~i~gD   65 (366)
                      +++++++||||+|+||+++++.|.+.|+ +|++++|+...  .......++.++++|
T Consensus        14 ~~~k~vlVTGas~gIG~aia~~l~~~G~-~V~~~~r~~~~--~~~~~~~~~~~~~~D   67 (266)
T 3p19_A           14 SMKKLVVITGASSGIGEAIARRFSEEGH-PLLLLARRVER--LKALNLPNTLCAQVD   67 (266)
T ss_dssp             -CCCEEEEESTTSHHHHHHHHHHHHTTC-CEEEEESCHHH--HHTTCCTTEEEEECC
T ss_pred             CCCCEEEEECCCCHHHHHHHHHHHHCCC-EEEEEECCHHH--HHHhhcCCceEEEec
Confidence            4467899999999999999999999995 89999987532  122233466777777

>3tsc_A Putative oxidoreductase; structural genomics, seattle structural genomics center for infectious disease, ssgcid, nucleotide; HET: NAD; 2.05A {Mycobacterium avium subsp} SCOP: c.2.1.0

Probab=98.36  E-value=2.2e-06  Score=78.31  Aligned_cols=37  Identities=27%  Similarity=0.489  Sum_probs=33.6

Q ss_pred             cccCCeEEEEcCCChhHHHHHHHHHHcCCceEEEEecC
Q 017760            8 GIEGKTFLVTGGLGHVGSALCLELVRRGAYQVRAFDLR   45 (366)
Q Consensus         8 ~~~~~~VlITGgtGfiG~~L~~~L~~~g~~~V~~~dr~   45 (366)
                      .+++++++||||+|.||.++++.|+++|+ +|+++||+
T Consensus         8 ~l~~k~~lVTGas~GIG~a~a~~la~~G~-~V~~~~r~   44 (277)
T 3tsc_A            8 KLEGRVAFITGAARGQGRAHAVRMAAEGA-DIIAVDIA   44 (277)
T ss_dssp             TTTTCEEEEESTTSHHHHHHHHHHHHTTC-EEEEEECC
T ss_pred             ccCCCEEEEECCccHHHHHHHHHHHHcCC-EEEEEecc
Confidence            35678999999999999999999999995 89999985

>2p91_A Enoyl-[acyl-carrier-protein] reductase [NADH]; NADH-dependent enoyl-ACP reductase, FABI, aquifex A VF5, structural genomics, PSI; 2.00A {Aquifex aeolicus}

Probab=98.36  E-value=1.1e-06  Score=80.75  Aligned_cols=37  Identities=27%  Similarity=0.336  Sum_probs=33.4

Q ss_pred             ccCCeEEEEcCC--ChhHHHHHHHHHHcCCceEEEEecCC
Q 017760            9 IEGKTFLVTGGL--GHVGSALCLELVRRGAYQVRAFDLRT   46 (366)
Q Consensus         9 ~~~~~VlITGgt--GfiG~~L~~~L~~~g~~~V~~~dr~~   46 (366)
                      +++++++||||+  |+||+++++.|+++|+ +|++++|+.
T Consensus        19 l~~k~vlVTGas~~~gIG~~ia~~l~~~G~-~V~~~~r~~   57 (285)
T 2p91_A           19 LEGKRALITGVANERSIAYGIAKSFHREGA-QLAFTYATP   57 (285)
T ss_dssp             TTTCEEEECCCSSTTSHHHHHHHHHHHTTC-EEEEEESSG
T ss_pred             cCCCEEEEECCCCCCcHHHHHHHHHHHcCC-EEEEEeCCH
Confidence            456789999999  9999999999999995 899999875

>3icc_A Putative 3-oxoacyl-(acyl carrier protein) reducta; structural genomics, putative 3-oxoacyl-(acyl carrier protei reductase, oxidoreductase; HET: NAP MES; 1.87A {Bacillus anthracis str}

Probab=98.35  E-value=1.5e-06  Score=78.00  Aligned_cols=39  Identities=31%  Similarity=0.348  Sum_probs=33.6

Q ss_pred             ccccCCeEEEEcCCChhHHHHHHHHHHcCCceEEEEecCC
Q 017760            7 EGIEGKTFLVTGGLGHVGSALCLELVRRGAYQVRAFDLRT   46 (366)
Q Consensus         7 ~~~~~~~VlITGgtGfiG~~L~~~L~~~g~~~V~~~dr~~   46 (366)
                      .++++++++||||+|.+|+++++.|+++|+ +|++++.+.
T Consensus         3 ~~l~~k~vlITGas~gIG~~~a~~l~~~G~-~v~~~~~~~   41 (255)
T 3icc_A            3 SMLKGKVALVTGASRGIGRAIAKRLANDGA-LVAIHYGNR   41 (255)
T ss_dssp             CTTTTCEEEETTCSSHHHHHHHHHHHHTTC-EEEEEESSC
T ss_pred             CccCCCEEEEECCCChHHHHHHHHHHHCCC-eEEEEeCCc
Confidence            356778999999999999999999999995 898875544

>1yb1_A 17-beta-hydroxysteroid dehydrogenase type XI; short chain dehydrogenase, HUM structural genomics, structural genomics consortium, SGC; HET: AE2; 1.95A {Homo sapiens} SCOP: c.2.1.2

Probab=98.34  E-value=5.9e-07  Score=81.86  Aligned_cols=57  Identities=16%  Similarity=0.228  Sum_probs=42.3

Q ss_pred             cccCCeEEEEcCCChhHHHHHHHHHHcCCceEEEEecCCCCccc--ccc--cCCCeEEEEcc
Q 017760            8 GIEGKTFLVTGGLGHVGSALCLELVRRGAYQVRAFDLRTNSPWS--HLL--INHGVHCIQGL   65 (366)
Q Consensus         8 ~~~~~~VlITGgtGfiG~~L~~~L~~~g~~~V~~~dr~~~~~~~--~~~--~~~~v~~i~gD   65 (366)
                      .+++++++||||+|++|+++++.|+++|+ +|++++|++.....  ..+  ...++.++.+|
T Consensus        28 ~l~~k~vlITGasggIG~~la~~L~~~G~-~V~~~~r~~~~~~~~~~~l~~~~~~~~~~~~D   88 (272)
T 1yb1_A           28 SVTGEIVLITGAGHGIGRLTAYEFAKLKS-KLVLWDINKHGLEETAAKCKGLGAKVHTFVVD   88 (272)
T ss_dssp             CCTTCEEEEETTTSHHHHHHHHHHHHTTC-EEEEEESCHHHHHHHHHHHHHTTCCEEEEECC
T ss_pred             ccCCCEEEEECCCchHHHHHHHHHHHCCC-EEEEEEcCHHHHHHHHHHHHhcCCeEEEEEee
Confidence            35678999999999999999999999995 89999987532110  001  12456777777

>3a28_C L-2.3-butanediol dehydrogenase; chiral substrate recognition, oxidoreductase; HET: NAD; 2.00A {Brevibacterium saccharolyticum}

Probab=98.33  E-value=2.8e-07  Score=83.38  Aligned_cols=54  Identities=20%  Similarity=0.280  Sum_probs=40.6

Q ss_pred             CCeEEEEcCCChhHHHHHHHHHHcCCceEEEEecCCCC--ccc--ccc--cCCCeEEEEcc
Q 017760           11 GKTFLVTGGLGHVGSALCLELVRRGAYQVRAFDLRTNS--PWS--HLL--INHGVHCIQGL   65 (366)
Q Consensus        11 ~~~VlITGgtGfiG~~L~~~L~~~g~~~V~~~dr~~~~--~~~--~~~--~~~~v~~i~gD   65 (366)
                      +++++||||+|+||+++++.|+++|+ +|++++|+...  ...  ..+  ...++.++++|
T Consensus         2 ~k~vlVTGas~gIG~~ia~~l~~~G~-~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~~D   61 (258)
T 3a28_C            2 SKVAMVTGGAQGIGRGISEKLAADGF-DIAVADLPQQEEQAAETIKLIEAADQKAVFVGLD   61 (258)
T ss_dssp             CCEEEEETTTSHHHHHHHHHHHHHTC-EEEEEECGGGHHHHHHHHHHHHTTTCCEEEEECC
T ss_pred             CCEEEEeCCCcHHHHHHHHHHHHCCC-EEEEEeCCcchHHHHHHHHHHHhcCCcEEEEEcc
Confidence            47899999999999999999999995 89999987643  110  111  13457777777

>3ioy_A Short-chain dehydrogenase/reductase SDR; structural genomics, oxidoreductase, PSI-2, protein structure initiative; 1.90A {Novosphingobium aromaticivorans DSM12444}

Probab=98.33  E-value=6.9e-07  Score=83.57  Aligned_cols=38  Identities=37%  Similarity=0.631  Sum_probs=34.4

Q ss_pred             ccCCeEEEEcCCChhHHHHHHHHHHcCCceEEEEecCCC
Q 017760            9 IEGKTFLVTGGLGHVGSALCLELVRRGAYQVRAFDLRTN   47 (366)
Q Consensus         9 ~~~~~VlITGgtGfiG~~L~~~L~~~g~~~V~~~dr~~~   47 (366)
                      +++++|+||||+|+||.++++.|+++|+ +|++++|+..
T Consensus         6 l~~k~vlVTGas~gIG~~la~~l~~~G~-~Vv~~~r~~~   43 (319)
T 3ioy_A            6 FAGRTAFVTGGANGVGIGLVRQLLNQGC-KVAIADIRQD   43 (319)
T ss_dssp             CTTCEEEEETTTSTHHHHHHHHHHHTTC-EEEEEESCHH
T ss_pred             CCCCEEEEcCCchHHHHHHHHHHHHCCC-EEEEEECCHH
Confidence            4568999999999999999999999995 8999999864

>3t7c_A Carveol dehydrogenase; structural genomics, seattle structural genomics center for infectious disease, ssgcid; HET: NAD; 1.95A {Mycobacterium avium}

Probab=98.33  E-value=5.8e-06  Score=76.42  Aligned_cols=37  Identities=32%  Similarity=0.543  Sum_probs=33.7

Q ss_pred             ccCCeEEEEcCCChhHHHHHHHHHHcCCceEEEEecCC
Q 017760            9 IEGKTFLVTGGLGHVGSALCLELVRRGAYQVRAFDLRT   46 (366)
Q Consensus         9 ~~~~~VlITGgtGfiG~~L~~~L~~~g~~~V~~~dr~~   46 (366)
                      +++++++||||+|.||.++++.|++.|+ +|+++|+++
T Consensus        26 l~gk~~lVTGas~GIG~aia~~la~~G~-~V~~~~~~~   62 (299)
T 3t7c_A           26 VEGKVAFITGAARGQGRSHAITLAREGA-DIIAIDVCK   62 (299)
T ss_dssp             TTTCEEEEESTTSHHHHHHHHHHHHTTC-EEEEEECCS
T ss_pred             cCCCEEEEECCCCHHHHHHHHHHHHCCC-EEEEEeccc
Confidence            4568999999999999999999999995 899999874

>3f1l_A Uncharacterized oxidoreductase YCIK; E. coli, NADP+,; 0.95A {Escherichia coli K12} SCOP: c.2.1.0 PDB: 3f1k_A 3e9q_A* 3f5q_A 3gz4_A* 3f5s_A 3gy0_A* 3iah_A* 3g1t_A

Probab=98.33  E-value=1.6e-06  Score=78.09  Aligned_cols=45  Identities=24%  Similarity=0.393  Sum_probs=38.3

Q ss_pred             CCccc-cccccCCeEEEEcCCChhHHHHHHHHHHcCCceEEEEecCC
Q 017760            1 MHLSE-NEGIEGKTFLVTGGLGHVGSALCLELVRRGAYQVRAFDLRT   46 (366)
Q Consensus         1 m~~~~-~~~~~~~~VlITGgtGfiG~~L~~~L~~~g~~~V~~~dr~~   46 (366)
                      |+.+. ...+++++++||||+|.||+++++.|++.|+ +|++++|+.
T Consensus         1 M~~~~~~~~l~~k~vlVTGas~gIG~aia~~l~~~G~-~V~~~~r~~   46 (252)
T 3f1l_A            1 MHYQPKQDLLNDRIILVTGASDGIGREAAMTYARYGA-TVILLGRNE   46 (252)
T ss_dssp             CCCCCCTTTTTTCEEEEESTTSHHHHHHHHHHHHTTC-EEEEEESCH
T ss_pred             CCcCCcccccCCCEEEEeCCCChHHHHHHHHHHHCCC-EEEEEeCCH
Confidence            56543 3456789999999999999999999999995 899999875

>3is3_A 17BETA-hydroxysteroid dehydrogenase; short chain dehydrogenase/REDU SDR, fungi, oxidoreductase; HET: GOL; 1.48A {Cochliobolus lunatus} PDB: 3qwf_A* 3qwh_A* 3qwi_A* 3itd_A

Probab=98.33  E-value=1.5e-06  Score=79.20  Aligned_cols=56  Identities=25%  Similarity=0.302  Sum_probs=42.2

Q ss_pred             ccCCeEEEEcCCChhHHHHHHHHHHcCCceEEEEecCCCCccc---ccc--cCCCeEEEEcc
Q 017760            9 IEGKTFLVTGGLGHVGSALCLELVRRGAYQVRAFDLRTNSPWS---HLL--INHGVHCIQGL   65 (366)
Q Consensus         9 ~~~~~VlITGgtGfiG~~L~~~L~~~g~~~V~~~dr~~~~~~~---~~~--~~~~v~~i~gD   65 (366)
                      +++++++||||+|.||++++++|+++|+ +|++.+++......   ..+  ...++.++++|
T Consensus        16 l~~k~~lVTGas~gIG~aia~~l~~~G~-~V~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~D   76 (270)
T 3is3_A           16 LDGKVALVTGSGRGIGAAVAVHLGRLGA-KVVVNYANSTKDAEKVVSEIKALGSDAIAIKAD   76 (270)
T ss_dssp             CTTCEEEESCTTSHHHHHHHHHHHHTTC-EEEEEESSCHHHHHHHHHHHHHTTCCEEEEECC
T ss_pred             cCCCEEEEECCCchHHHHHHHHHHHCCC-EEEEEcCCCHHHHHHHHHHHHhcCCcEEEEEcC
Confidence            4578999999999999999999999995 89998876532211   111  13567788888

>1xkq_A Short-chain reductase family member (5D234); parrallel beta-sheet of seven strands in the order 3214567; HET: NDP; 2.10A {Caenorhabditis elegans} SCOP: c.2.1.2

Probab=98.30  E-value=4.6e-07  Score=82.95  Aligned_cols=37  Identities=22%  Similarity=0.381  Sum_probs=33.9

Q ss_pred             ccCCeEEEEcCCChhHHHHHHHHHHcCCceEEEEecCC
Q 017760            9 IEGKTFLVTGGLGHVGSALCLELVRRGAYQVRAFDLRT   46 (366)
Q Consensus         9 ~~~~~VlITGgtGfiG~~L~~~L~~~g~~~V~~~dr~~   46 (366)
                      +++++++||||+|++|+++++.|+++|+ +|++++|+.
T Consensus         4 l~~k~vlVTGas~gIG~~ia~~l~~~G~-~V~~~~r~~   40 (280)
T 1xkq_A            4 FSNKTVIITGSSNGIGRTTAILFAQEGA-NVTITGRSS   40 (280)
T ss_dssp             TTTCEEEETTCSSHHHHHHHHHHHHTTC-EEEEEESCH
T ss_pred             CCCCEEEEECCCChHHHHHHHHHHHCCC-EEEEEeCCH
Confidence            5678999999999999999999999995 899999875

>1g0o_A Trihydroxynaphthalene reductase; protein-NADPH-active site inhibitor complex, dinucleotide binding fold, oxidoreductase; HET: NDP PYQ; 1.70A {Magnaporthe grisea} SCOP: c.2.1.2 PDB: 1doh_A* 1g0n_A* 1ybv_A*

Probab=98.29  E-value=9.9e-07  Score=80.87  Aligned_cols=38  Identities=37%  Similarity=0.512  Sum_probs=34.2

Q ss_pred             ccCCeEEEEcCCChhHHHHHHHHHHcCCceEEEEecCCC
Q 017760            9 IEGKTFLVTGGLGHVGSALCLELVRRGAYQVRAFDLRTN   47 (366)
Q Consensus         9 ~~~~~VlITGgtGfiG~~L~~~L~~~g~~~V~~~dr~~~   47 (366)
                      +++++++||||+|+||+++++.|+++|+ +|++++|+..
T Consensus        27 ~~~k~vlVTGas~gIG~~ia~~l~~~G~-~V~~~~r~~~   64 (283)
T 1g0o_A           27 LEGKVALVTGAGRGIGREMAMELGRRGC-KVIVNYANST   64 (283)
T ss_dssp             CTTCEEEETTTTSHHHHHHHHHHHHTTC-EEEEEESSCH
T ss_pred             CCCCEEEEeCCCcHHHHHHHHHHHHCCC-EEEEEeCCch
Confidence            4568999999999999999999999995 8999998753

>4imr_A 3-oxoacyl-(acyl-carrier-protein) reductase; oxidoreductase, nicotinamide adenine dinucleotide phosphate, structural genomics; HET: NAP; 1.96A {Agrobacterium fabrum}

Probab=98.28  E-value=5e-07  Score=82.66  Aligned_cols=56  Identities=25%  Similarity=0.339  Sum_probs=42.9

Q ss_pred             ccCCeEEEEcCCChhHHHHHHHHHHcCCceEEEEecCCCCccc--ccc--cCCCeEEEEcc
Q 017760            9 IEGKTFLVTGGLGHVGSALCLELVRRGAYQVRAFDLRTNSPWS--HLL--INHGVHCIQGL   65 (366)
Q Consensus         9 ~~~~~VlITGgtGfiG~~L~~~L~~~g~~~V~~~dr~~~~~~~--~~~--~~~~v~~i~gD   65 (366)
                      +++++++||||+|.||+++++.|+++|+ +|++.+|+......  ..+  ....+.++++|
T Consensus        31 l~gk~~lVTGas~GIG~aia~~la~~G~-~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~D   90 (275)
T 4imr_A           31 LRGRTALVTGSSRGIGAAIAEGLAGAGA-HVILHGVKPGSTAAVQQRIIASGGTAQELAGD   90 (275)
T ss_dssp             CTTCEEEETTCSSHHHHHHHHHHHHTTC-EEEEEESSTTTTHHHHHHHHHTTCCEEEEECC
T ss_pred             CCCCEEEEECCCCHHHHHHHHHHHHCCC-EEEEEcCCHHHHHHHHHHHHhcCCeEEEEEec
Confidence            5578999999999999999999999995 89999998654321  111  13456777777

>3grk_A Enoyl-(acyl-carrier-protein) reductase (NADH); ssgcid, niaid, structural genomics, seattle structural genomics center for infectious disease; 2.35A {Brucella melitensis} PDB: 4eit_A*

Probab=98.28  E-value=1.4e-06  Score=80.52  Aligned_cols=37  Identities=16%  Similarity=0.173  Sum_probs=33.4

Q ss_pred             ccCCeEEEEcCCCh--hHHHHHHHHHHcCCceEEEEecCC
Q 017760            9 IEGKTFLVTGGLGH--VGSALCLELVRRGAYQVRAFDLRT   46 (366)
Q Consensus         9 ~~~~~VlITGgtGf--iG~~L~~~L~~~g~~~V~~~dr~~   46 (366)
                      +++++++||||+|+  ||+++++.|.+.|+ +|++.+|+.
T Consensus        29 l~gk~~lVTGasg~~GIG~aia~~la~~G~-~V~~~~r~~   67 (293)
T 3grk_A           29 LQGKRGLILGVANNRSIAWGIAKAAREAGA-ELAFTYQGD   67 (293)
T ss_dssp             TTTCEEEEECCCSSSSHHHHHHHHHHHTTC-EEEEEECSH
T ss_pred             CCCCEEEEEcCCCCCcHHHHHHHHHHHCCC-EEEEEcCCH
Confidence            45689999999999  99999999999995 899998874

>2pd4_A Enoyl-[acyl-carrier-protein] reductase [NADH]; antibacterial target, type II fatty acid biosynthesis, enoyl-ACP-reductase, FABI; HET: NAD DCN; 2.30A {Helicobacter pylori} SCOP: c.2.1.2 PDB: 2pd3_A*

Probab=98.26  E-value=2.8e-06  Score=77.45  Aligned_cols=38  Identities=18%  Similarity=0.257  Sum_probs=34.3

Q ss_pred             ccCCeEEEEcCC--ChhHHHHHHHHHHcCCceEEEEecCCC
Q 017760            9 IEGKTFLVTGGL--GHVGSALCLELVRRGAYQVRAFDLRTN   47 (366)
Q Consensus         9 ~~~~~VlITGgt--GfiG~~L~~~L~~~g~~~V~~~dr~~~   47 (366)
                      +++++++||||+  |+||+++++.|.++|+ +|++++|+..
T Consensus         4 l~~k~vlVTGas~~~gIG~~~a~~l~~~G~-~V~~~~r~~~   43 (275)
T 2pd4_A            4 LKGKKGLIVGVANNKSIAYGIAQSCFNQGA-TLAFTYLNES   43 (275)
T ss_dssp             TTTCEEEEECCCSTTSHHHHHHHHHHTTTC-EEEEEESSTT
T ss_pred             CCCCEEEEECCCCCCcHHHHHHHHHHHCCC-EEEEEeCCHH
Confidence            556899999999  9999999999999995 8999999864

>3lf2_A Short chain oxidoreductase Q9HYA2; SDR, SCOR, rossmann fold; HET: NAP; 2.30A {Pseudomonas aeruginosa} PDB: 3lf1_A*

Probab=98.26  E-value=1.5e-06  Score=78.97  Aligned_cols=57  Identities=18%  Similarity=0.108  Sum_probs=42.5

Q ss_pred             cccCCeEEEEcCCChhHHHHHHHHHHcCCceEEEEecCCCCccc--cc----ccCCCeEEEEcc
Q 017760            8 GIEGKTFLVTGGLGHVGSALCLELVRRGAYQVRAFDLRTNSPWS--HL----LINHGVHCIQGL   65 (366)
Q Consensus         8 ~~~~~~VlITGgtGfiG~~L~~~L~~~g~~~V~~~dr~~~~~~~--~~----~~~~~v~~i~gD   65 (366)
                      .+++++++||||+|.||+++++.|.+.|+ +|++.+|+......  ..    .....+.++++|
T Consensus         5 ~l~~k~~lVTGas~GIG~aia~~l~~~G~-~V~~~~r~~~~~~~~~~~l~~~~~~~~~~~~~~D   67 (265)
T 3lf2_A            5 DLSEAVAVVTGGSSGIGLATVELLLEAGA-AVAFCARDGERLRAAESALRQRFPGARLFASVCD   67 (265)
T ss_dssp             CCTTCEEEEETCSSHHHHHHHHHHHHTTC-EEEEEESCHHHHHHHHHHHHHHSTTCCEEEEECC
T ss_pred             CcCCCEEEEeCCCChHHHHHHHHHHHCCC-EEEEEeCCHHHHHHHHHHHHHhcCCceEEEEeCC
Confidence            35678999999999999999999999995 89999987532111  01    112247788888

>3l77_A Short-chain alcohol dehydrogenase; oxidoreductase; HET: NJP PG4; 1.60A {Thermococcus sibiricus} SCOP: c.2.1.0 PDB: 3tn7_A*

Probab=98.25  E-value=4.1e-06  Score=74.31  Aligned_cols=54  Identities=19%  Similarity=0.068  Sum_probs=41.4

Q ss_pred             CCeEEEEcCCChhHHHHHHHHHHcCCceEEEEecCCCCccc--cc---ccCCCeEEEEcc
Q 017760           11 GKTFLVTGGLGHVGSALCLELVRRGAYQVRAFDLRTNSPWS--HL---LINHGVHCIQGL   65 (366)
Q Consensus        11 ~~~VlITGgtGfiG~~L~~~L~~~g~~~V~~~dr~~~~~~~--~~---~~~~~v~~i~gD   65 (366)
                      |++++||||+|.+|++++++|.++|+ +|++.+|+......  ..   .....+.++++|
T Consensus         2 ~k~vlITGas~gIG~~ia~~l~~~G~-~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~D   60 (235)
T 3l77_A            2 MKVAVITGASRGIGEAIARALARDGY-ALALGARSVDRLEKIAHELMQEQGVEVFYHHLD   60 (235)
T ss_dssp             CCEEEEESCSSHHHHHHHHHHHHTTC-EEEEEESCHHHHHHHHHHHHHHHCCCEEEEECC
T ss_pred             CCEEEEECCCcHHHHHHHHHHHHCCC-EEEEEeCCHHHHHHHHHHHHhhcCCeEEEEEec
Confidence            57899999999999999999999995 89999987532111  01   123567788888

>4dyv_A Short-chain dehydrogenase/reductase SDR; structural genomics, PSI-biology, NEW YORK structural genomi research consortium, nysgrc; 1.80A {Xanthobacter autotrophicus}

Probab=98.24  E-value=8.4e-07  Score=81.07  Aligned_cols=56  Identities=23%  Similarity=0.223  Sum_probs=40.4

Q ss_pred             ccCCeEEEEcCCChhHHHHHHHHHHcCCceEEEEecCCCCccc-ccccCCCeEEEEcc
Q 017760            9 IEGKTFLVTGGLGHVGSALCLELVRRGAYQVRAFDLRTNSPWS-HLLINHGVHCIQGL   65 (366)
Q Consensus         9 ~~~~~VlITGgtGfiG~~L~~~L~~~g~~~V~~~dr~~~~~~~-~~~~~~~v~~i~gD   65 (366)
                      +++++++||||+|.||+++++.|.++|+ +|++++|+...... ......++.++++|
T Consensus        26 ~~~k~~lVTGas~GIG~aia~~la~~G~-~V~~~~r~~~~~~~~~~~~~~~~~~~~~D   82 (272)
T 4dyv_A           26 TGKKIAIVTGAGSGVGRAVAVALAGAGY-GVALAGRRLDALQETAAEIGDDALCVPTD   82 (272)
T ss_dssp             --CCEEEETTTTSHHHHHHHHHHHHTTC-EEEEEESCHHHHHHHHHHHTSCCEEEECC
T ss_pred             CCCCEEEEeCCCcHHHHHHHHHHHHCCC-EEEEEECCHHHHHHHHHHhCCCeEEEEec
Confidence            4567899999999999999999999995 89999987532111 01112456777777

>3h7a_A Short chain dehydrogenase; oxidoreductase, PSI-2, NYSGXRC, structural genomics, protein structure initiative; 1.87A {Rhodopseudomonas palustris}

Probab=98.21  E-value=2.3e-06  Score=77.08  Aligned_cols=56  Identities=13%  Similarity=-0.003  Sum_probs=42.3

Q ss_pred             ccCCeEEEEcCCChhHHHHHHHHHHcCCceEEEEecCCCCccc--ccc--cCCCeEEEEcc
Q 017760            9 IEGKTFLVTGGLGHVGSALCLELVRRGAYQVRAFDLRTNSPWS--HLL--INHGVHCIQGL   65 (366)
Q Consensus         9 ~~~~~VlITGgtGfiG~~L~~~L~~~g~~~V~~~dr~~~~~~~--~~~--~~~~v~~i~gD   65 (366)
                      +++++++||||+|.||+++++.|.++|+ +|++++|+......  ..+  ...++.++++|
T Consensus         5 ~~~k~vlVTGas~GIG~aia~~l~~~G~-~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~D   64 (252)
T 3h7a_A            5 PRNATVAVIGAGDYIGAEIAKKFAAEGF-TVFAGRRNGEKLAPLVAEIEAAGGRIVARSLD   64 (252)
T ss_dssp             CCSCEEEEECCSSHHHHHHHHHHHHTTC-EEEEEESSGGGGHHHHHHHHHTTCEEEEEECC
T ss_pred             CCCCEEEEECCCchHHHHHHHHHHHCCC-EEEEEeCCHHHHHHHHHHHHhcCCeEEEEECc
Confidence            4568999999999999999999999995 89999997643211  011  13456777777

>1zmt_A Haloalcohol dehalogenase HHEC; halohydrin dehalogenase, epoxide catalysis, enantioselectivity, lyase; HET: RNO; 1.70A {Agrobacterium tumefaciens} SCOP: c.2.1.2 PDB: 1pwz_A 1px0_A* 1pwx_A* 1zo8_A*

Probab=98.20  E-value=2.6e-06  Score=76.79  Aligned_cols=36  Identities=25%  Similarity=0.153  Sum_probs=32.2

Q ss_pred             CCeEEEEcCCChhHHHHHHHHHHcCCceEEEEecCCC
Q 017760           11 GKTFLVTGGLGHVGSALCLELVRRGAYQVRAFDLRTN   47 (366)
Q Consensus        11 ~~~VlITGgtGfiG~~L~~~L~~~g~~~V~~~dr~~~   47 (366)
                      |++++||||+|.||+++++.|+++|+ +|++++|+..
T Consensus         1 Mk~vlVTGas~gIG~~ia~~l~~~G~-~V~~~~r~~~   36 (254)
T 1zmt_A            1 MSTAIVTNVKHFGGMGSALRLSEAGH-TVACHDESFK   36 (254)
T ss_dssp             -CEEEESSTTSTTHHHHHHHHHHTTC-EEEECCGGGG
T ss_pred             CeEEEEeCCCchHHHHHHHHHHHCCC-EEEEEeCCHH
Confidence            46899999999999999999999995 8999998754

>3ged_A Short-chain dehydrogenase/reductase SDR; SCOR, rossmann fold, oxidoreductase; 1.70A {Clostridium thermocellum atcc 27405} PDB: 3geg_A*

Probab=98.20  E-value=5.6e-06  Score=74.46  Aligned_cols=53  Identities=21%  Similarity=0.396  Sum_probs=42.1

Q ss_pred             CeEEEEcCCChhHHHHHHHHHHcCCceEEEEecCCCCcccccccCCCeEEEEcc
Q 017760           12 KTFLVTGGLGHVGSALCLELVRRGAYQVRAFDLRTNSPWSHLLINHGVHCIQGL   65 (366)
Q Consensus        12 ~~VlITGgtGfiG~~L~~~L~~~g~~~V~~~dr~~~~~~~~~~~~~~v~~i~gD   65 (366)
                      ++|+||||++-||+++++.|.+.|+ +|.+.|++............++..+++|
T Consensus         3 K~vlVTGas~GIG~aia~~la~~Ga-~V~~~~~~~~~~~~~~~~~~~~~~~~~D   55 (247)
T 3ged_A            3 RGVIVTGGGHGIGKQICLDFLEAGD-KVCFIDIDEKRSADFAKERPNLFYFHGD   55 (247)
T ss_dssp             CEEEEESTTSHHHHHHHHHHHHTTC-EEEEEESCHHHHHHHHTTCTTEEEEECC
T ss_pred             CEEEEecCCCHHHHHHHHHHHHCCC-EEEEEeCCHHHHHHHHHhcCCEEEEEec
Confidence            7899999999999999999999996 8999999754322112223567888999

>3l6e_A Oxidoreductase, short-chain dehydrogenase/reducta; structural genomics, PSI-2, protein structure initiative; 2.30A {Aeromonas hydrophila subsp} SCOP: c.2.1.0

Probab=98.19  E-value=1.7e-06  Score=77.12  Aligned_cols=56  Identities=30%  Similarity=0.343  Sum_probs=40.8

Q ss_pred             ccCCeEEEEcCCChhHHHHHHHHHHcCCceEEEEecCCCCccc-ccccCCCeEEEEcc
Q 017760            9 IEGKTFLVTGGLGHVGSALCLELVRRGAYQVRAFDLRTNSPWS-HLLINHGVHCIQGL   65 (366)
Q Consensus         9 ~~~~~VlITGgtGfiG~~L~~~L~~~g~~~V~~~dr~~~~~~~-~~~~~~~v~~i~gD   65 (366)
                      |++++++||||+|.||+++++.|.++|+ +|++++|+...... ......++.++.+|
T Consensus         1 Ms~k~vlVTGas~GIG~a~a~~l~~~G~-~V~~~~r~~~~~~~~~~~~~~~~~~~~~D   57 (235)
T 3l6e_A            1 MSLGHIIVTGAGSGLGRALTIGLVERGH-QVSMMGRRYQRLQQQELLLGNAVIGIVAD   57 (235)
T ss_dssp             --CCEEEEESTTSHHHHHHHHHHHHTTC-EEEEEESCHHHHHHHHHHHGGGEEEEECC
T ss_pred             CCCCEEEEECCCCHHHHHHHHHHHHCCC-EEEEEECCHHHHHHHHHHhcCCceEEECC
Confidence            4568999999999999999999999995 89999997532211 00012257777777

>3rkr_A Short chain oxidoreductase; rossmann fold; HET: NAP; 2.42A {Uncultured bacterium BIO5}

Probab=98.19  E-value=1.9e-06  Score=77.97  Aligned_cols=56  Identities=18%  Similarity=0.163  Sum_probs=42.4

Q ss_pred             ccCCeEEEEcCCChhHHHHHHHHHHcCCceEEEEecCCCCccc--ccc--cCCCeEEEEcc
Q 017760            9 IEGKTFLVTGGLGHVGSALCLELVRRGAYQVRAFDLRTNSPWS--HLL--INHGVHCIQGL   65 (366)
Q Consensus         9 ~~~~~VlITGgtGfiG~~L~~~L~~~g~~~V~~~dr~~~~~~~--~~~--~~~~v~~i~gD   65 (366)
                      +++++++||||+|+||+++++.|+++|+ +|++++|+......  ..+  ....+.++.+|
T Consensus        27 l~~k~vlITGas~gIG~~la~~l~~~G~-~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~D   86 (262)
T 3rkr_A           27 LSGQVAVVTGASRGIGAAIARKLGSLGA-RVVLTARDVEKLRAVEREIVAAGGEAESHACD   86 (262)
T ss_dssp             TTTCEEEESSTTSHHHHHHHHHHHHTTC-EEEEEESCHHHHHHHHHHHHHTTCEEEEEECC
T ss_pred             cCCCEEEEECCCChHHHHHHHHHHHCCC-EEEEEECCHHHHHHHHHHHHHhCCceeEEEec
Confidence            5568999999999999999999999995 89999987533211  011  13457777777

>3gdg_A Probable NADP-dependent mannitol dehydrogenase; rossmann fold, beta-alpha-beta motifs, open twisted sheet, A NADP, oxidoreductase; 2.30A {Cladosporium herbarum} SCOP: c.2.1.0 PDB: 3gdf_A

Probab=98.16  E-value=7.2e-06  Score=74.17  Aligned_cols=56  Identities=18%  Similarity=0.120  Sum_probs=42.7

Q ss_pred             ccCCeEEEEcCC--ChhHHHHHHHHHHcCCceEEEEecCCCCccc---ccc---cCCCeEEEEcc
Q 017760            9 IEGKTFLVTGGL--GHVGSALCLELVRRGAYQVRAFDLRTNSPWS---HLL---INHGVHCIQGL   65 (366)
Q Consensus         9 ~~~~~VlITGgt--GfiG~~L~~~L~~~g~~~V~~~dr~~~~~~~---~~~---~~~~v~~i~gD   65 (366)
                      +++++++||||+  |.+|.+++++|++.|+ +|++++++......   ..+   ...++.++++|
T Consensus        18 l~~k~vlITGas~~~giG~~~a~~l~~~G~-~v~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~D   81 (267)
T 3gdg_A           18 LKGKVVVVTGASGPKGMGIEAARGCAEMGA-AVAITYASRAQGAEENVKELEKTYGIKAKAYKCQ   81 (267)
T ss_dssp             CTTCEEEETTCCSSSSHHHHHHHHHHHTSC-EEEECBSSSSSHHHHHHHHHHHHHCCCEECCBCC
T ss_pred             cCCCEEEEECCCCCCChHHHHHHHHHHCCC-eEEEEeCCcchhHHHHHHHHHHhcCCceeEEecC
Confidence            457899999999  8999999999999995 89999888654311   111   13467777777

>3guy_A Short-chain dehydrogenase/reductase SDR; structural genomics, oxidoreductase, PSI-2, protein structur initiative; 1.90A {Vibrio parahaemolyticus}

Probab=98.16  E-value=2.2e-06  Score=75.95  Aligned_cols=54  Identities=11%  Similarity=0.023  Sum_probs=38.5

Q ss_pred             CCeEEEEcCCChhHHHHHHHHHHcCCceEEEEecCCCCccc-ccccCCCeEEEEcc
Q 017760           11 GKTFLVTGGLGHVGSALCLELVRRGAYQVRAFDLRTNSPWS-HLLINHGVHCIQGL   65 (366)
Q Consensus        11 ~~~VlITGgtGfiG~~L~~~L~~~g~~~V~~~dr~~~~~~~-~~~~~~~v~~i~gD   65 (366)
                      |++++||||+|.+|+++++.|+++|+ +|++++|+...... ......++.++.+|
T Consensus         1 Mk~vlVTGas~gIG~~~a~~l~~~G~-~V~~~~r~~~~~~~~~~~~~~~~~~~~~D   55 (230)
T 3guy_A            1 MSLIVITGASSGLGAELAKLYDAEGK-ATYLTGRSESKLSTVTNCLSNNVGYRARD   55 (230)
T ss_dssp             --CEEEESTTSHHHHHHHHHHHHTTC-CEEEEESCHHHHHHHHHTCSSCCCEEECC
T ss_pred             CCEEEEecCCchHHHHHHHHHHHCCC-EEEEEeCCHHHHHHHHHHHhhccCeEeec
Confidence            46899999999999999999999995 89999987532111 01112455666666

>3rku_A Oxidoreductase YMR226C; substrate fingerprint, short chain oxidoreductase, rossmann oxidoreductase; HET: NAP; 2.60A {Saccharomyces cerevisiae}

Probab=98.14  E-value=3.4e-06  Score=77.63  Aligned_cols=39  Identities=26%  Similarity=0.351  Sum_probs=33.6

Q ss_pred             ccCCeEEEEcCCChhHHHHHHHHHHcCC--ceEEEEecCCC
Q 017760            9 IEGKTFLVTGGLGHVGSALCLELVRRGA--YQVRAFDLRTN   47 (366)
Q Consensus         9 ~~~~~VlITGgtGfiG~~L~~~L~~~g~--~~V~~~dr~~~   47 (366)
                      +++++++||||+|.||+++++.|++.|.  .+|++.+|+..
T Consensus        31 l~~k~~lVTGas~GIG~aia~~l~~~G~~~~~V~~~~r~~~   71 (287)
T 3rku_A           31 LAKKTVLITGASAGIGKATALEYLEASNGDMKLILAARRLE   71 (287)
T ss_dssp             HTTCEEEEESTTSHHHHHHHHHHHHHHTTCSEEEEEESCHH
T ss_pred             cCCCEEEEecCCChHHHHHHHHHHHcCCCCceEEEEECCHH
Confidence            4578999999999999999999999983  27999988753

>3tfo_A Putative 3-oxoacyl-(acyl-carrier-protein) reducta; structural genomics, PSI-biology, NEW YORK structural genomi research consortium; 2.08A {Sinorhizobium meliloti}

Probab=98.12  E-value=3.4e-06  Score=76.68  Aligned_cols=56  Identities=20%  Similarity=0.139  Sum_probs=41.7

Q ss_pred             ccCCeEEEEcCCChhHHHHHHHHHHcCCceEEEEecCCCCccc--ccc--cCCCeEEEEcc
Q 017760            9 IEGKTFLVTGGLGHVGSALCLELVRRGAYQVRAFDLRTNSPWS--HLL--INHGVHCIQGL   65 (366)
Q Consensus         9 ~~~~~VlITGgtGfiG~~L~~~L~~~g~~~V~~~dr~~~~~~~--~~~--~~~~v~~i~gD   65 (366)
                      +++++++||||+|.||+++++.|.+.|+ +|++++|+......  ..+  ....+.++.+|
T Consensus         2 l~~k~~lVTGas~GIG~aia~~la~~G~-~V~~~~r~~~~~~~~~~~l~~~~~~~~~~~~D   61 (264)
T 3tfo_A            2 VMDKVILITGASGGIGEGIARELGVAGA-KILLGARRQARIEAIATEIRDAGGTALAQVLD   61 (264)
T ss_dssp             CTTCEEEESSTTSHHHHHHHHHHHHTTC-EEEEEESSHHHHHHHHHHHHHTTCEEEEEECC
T ss_pred             CCCCEEEEeCCccHHHHHHHHHHHHCCC-EEEEEECCHHHHHHHHHHHHhcCCcEEEEEcC
Confidence            4568999999999999999999999995 89999987532111  011  12456677777

>3zv4_A CIS-2,3-dihydrobiphenyl-2,3-DIOL dehydrogenase; oxidoreductase, short chain dehydrogenase/oxidoreductase, SD comamonas testosteroni; 1.80A {Pandoraea pnomenusa} SCOP: c.2.1.2 PDB: 2y99_A* 3zv3_A 2y93_A 3zv5_A* 3zv6_A* 1bdb_A*

Probab=98.12  E-value=2e-06  Score=78.81  Aligned_cols=56  Identities=25%  Similarity=0.352  Sum_probs=42.1

Q ss_pred             ccCCeEEEEcCCChhHHHHHHHHHHcCCceEEEEecCCCCccc-ccccCCCeEEEEcc
Q 017760            9 IEGKTFLVTGGLGHVGSALCLELVRRGAYQVRAFDLRTNSPWS-HLLINHGVHCIQGL   65 (366)
Q Consensus         9 ~~~~~VlITGgtGfiG~~L~~~L~~~g~~~V~~~dr~~~~~~~-~~~~~~~v~~i~gD   65 (366)
                      +++++++||||+|.||+++++.|.++|+ +|++++|+...... ......++.++++|
T Consensus         3 l~gk~~lVTGas~GIG~aia~~la~~G~-~V~~~~r~~~~~~~~~~~~~~~~~~~~~D   59 (281)
T 3zv4_A            3 LTGEVALITGGASGLGRALVDRFVAEGA-RVAVLDKSAERLRELEVAHGGNAVGVVGD   59 (281)
T ss_dssp             TTTCEEEEETCSSHHHHHHHHHHHHTTC-EEEEEESCHHHHHHHHHHTBTTEEEEECC
T ss_pred             cCCCEEEEECCCcHHHHHHHHHHHHCcC-EEEEEeCCHHHHHHHHHHcCCcEEEEEcC
Confidence            5678999999999999999999999995 89999987532111 11113456777777

>3kzv_A Uncharacterized oxidoreductase YIR035C; cytoplasmic protein, unknown function, structural genomics, MCSG, protein structure initiative; 2.00A {Saccharomyces cerevisiae}

Probab=98.11  E-value=4.3e-06  Score=75.32  Aligned_cols=55  Identities=18%  Similarity=0.109  Sum_probs=38.7

Q ss_pred             CCeEEEEcCCChhHHHHHHHHHHcCC-ceEEEEecCCCCccc-ccccCCCeEEEEcc
Q 017760           11 GKTFLVTGGLGHVGSALCLELVRRGA-YQVRAFDLRTNSPWS-HLLINHGVHCIQGL   65 (366)
Q Consensus        11 ~~~VlITGgtGfiG~~L~~~L~~~g~-~~V~~~dr~~~~~~~-~~~~~~~v~~i~gD   65 (366)
                      +++++||||+|.||+++++.|.+.|. ..|++.+|+...... ......++.++++|
T Consensus         2 gk~~lVTGas~GIG~aia~~l~~~g~~~~v~~~~r~~~~~~~~~~~~~~~~~~~~~D   58 (254)
T 3kzv_A            2 GKVILVTGVSRGIGKSIVDVLFSLDKDTVVYGVARSEAPLKKLKEKYGDRFFYVVGD   58 (254)
T ss_dssp             CCEEEECSTTSHHHHHHHHHHHHHCSSCEEEEEESCHHHHHHHHHHHGGGEEEEESC
T ss_pred             CCEEEEECCCchHHHHHHHHHHhcCCCeEEEEecCCHHHHHHHHHHhCCceEEEECC
Confidence            47899999999999999999999852 478888876432110 01112456777777

>3sc4_A Short chain dehydrogenase (A0QTM2 homolog); ssgcid, NIH, niaid, SBRI, UW, emerald biostructures, structu genomics; 2.50A {Mycobacterium thermoresistibile}

Probab=98.10  E-value=1.1e-05  Score=74.11  Aligned_cols=57  Identities=21%  Similarity=0.250  Sum_probs=44.2

Q ss_pred             cccCCeEEEEcCCChhHHHHHHHHHHcCCceEEEEecCCCCccc---------c--cccCCCeEEEEcc
Q 017760            8 GIEGKTFLVTGGLGHVGSALCLELVRRGAYQVRAFDLRTNSPWS---------H--LLINHGVHCIQGL   65 (366)
Q Consensus         8 ~~~~~~VlITGgtGfiG~~L~~~L~~~g~~~V~~~dr~~~~~~~---------~--~~~~~~v~~i~gD   65 (366)
                      .+++++++||||+|.||++++++|.++|+ +|++++|+......         .  .....++.++++|
T Consensus         6 ~l~~k~vlVTGas~GIG~aia~~l~~~G~-~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~D   73 (285)
T 3sc4_A            6 SLRGKTMFISGGSRGIGLAIAKRVAADGA-NVALVAKSAEPHPKLPGTIYTAAKEIEEAGGQALPIVGD   73 (285)
T ss_dssp             CCTTCEEEEESCSSHHHHHHHHHHHTTTC-EEEEEESCCSCCSSSCCCHHHHHHHHHHHTSEEEEEECC
T ss_pred             CCCCCEEEEECCCCHHHHHHHHHHHHCCC-EEEEEECChhhhhhhhHHHHHHHHHHHhcCCcEEEEECC
Confidence            45678999999999999999999999995 89999998753211         0  0113467888888

>4b79_A PA4098, probable short-chain dehydrogenase; oxidoreductase, infectious disease, structure-based inhibito; HET: NAD; 1.98A {Pseudomonas aeruginosa PAO1}

Probab=98.00  E-value=4.8e-05  Score=68.04  Aligned_cols=54  Identities=26%  Similarity=0.383  Sum_probs=45.5

Q ss_pred             ccCCeEEEEcCCChhHHHHHHHHHHcCCceEEEEecCCCCcccccccCCCeEEEEcc
Q 017760            9 IEGKTFLVTGGLGHVGSALCLELVRRGAYQVRAFDLRTNSPWSHLLINHGVHCIQGL   65 (366)
Q Consensus         9 ~~~~~VlITGgtGfiG~~L~~~L~~~g~~~V~~~dr~~~~~~~~~~~~~~v~~i~gD   65 (366)
                      .++++++||||++-||+++++.|.+.|+ +|++.||+....  .......+..+++|
T Consensus         9 f~GK~alVTGas~GIG~aia~~la~~Ga-~Vv~~~~~~~~~--~~~~~~~~~~~~~D   62 (242)
T 4b79_A            9 YAGQQVLVTGGSSGIGAAIAMQFAELGA-EVVALGLDADGV--HAPRHPRIRREELD   62 (242)
T ss_dssp             TTTCEEEEETTTSHHHHHHHHHHHHTTC-EEEEEESSTTST--TSCCCTTEEEEECC
T ss_pred             CCCCEEEEeCCCCHHHHHHHHHHHHCCC-EEEEEeCCHHHH--hhhhcCCeEEEEec
Confidence            4789999999999999999999999996 899999986543  23345678888888

>4fs3_A Enoyl-[acyl-carrier-protein] reductase [NADPH] FA; rossmann fold, short chain dehydrogenase, NADPH binding, oxidoreductase; HET: 0WD 0WE; 1.80A {Staphylococcus aureus subsp} PDB: 3gr6_A* 3gns_A* 4all_A* 3gnt_A 4alk_A* 4alj_A* 4ali_A* 4alm_A 4aln_A

Probab=97.96  E-value=4.3e-05  Score=68.93  Aligned_cols=57  Identities=19%  Similarity=0.131  Sum_probs=44.1

Q ss_pred             cccCCeEEEEcCCC--hhHHHHHHHHHHcCCceEEEEecCCCCccc-----ccccCCCeEEEEcc
Q 017760            8 GIEGKTFLVTGGLG--HVGSALCLELVRRGAYQVRAFDLRTNSPWS-----HLLINHGVHCIQGL   65 (366)
Q Consensus         8 ~~~~~~VlITGgtG--fiG~~L~~~L~~~g~~~V~~~dr~~~~~~~-----~~~~~~~v~~i~gD   65 (366)
                      ..++++++||||+|  -||.++++.|.+.|+ +|++.+|+......     .+....++.++++|
T Consensus         3 ~l~gK~alVTGaa~~~GIG~aiA~~la~~Ga-~Vvi~~r~~~~~~~~~~~~~~~~~~~~~~~~~D   66 (256)
T 4fs3_A            3 NLENKTYVIMGIANKRSIAFGVAKVLDQLGA-KLVFTYRKERSRKELEKLLEQLNQPEAHLYQID   66 (256)
T ss_dssp             CCTTCEEEEECCCSTTCHHHHHHHHHHHTTC-EEEEEESSGGGHHHHHHHHGGGTCSSCEEEECC
T ss_pred             CCCCCEEEEECCCCCchHHHHHHHHHHHCCC-EEEEEECCHHHHHHHHHHHHhcCCCcEEEEEcc
Confidence            45789999999987  799999999999996 89999998543211     12223568888888

>3asu_A Short-chain dehydrogenase/reductase SDR; SDR family, rossmann-fold, short-chain dehydrogenase/reducta ALLO-threonine dehydrogenase; 1.90A {Escherichia coli} PDB: 3asv_A*

Probab=97.96  E-value=2.5e-05  Score=70.11  Aligned_cols=34  Identities=26%  Similarity=0.393  Sum_probs=31.3

Q ss_pred             CeEEEEcCCChhHHHHHHHHHHcCCceEEEEecCC
Q 017760           12 KTFLVTGGLGHVGSALCLELVRRGAYQVRAFDLRT   46 (366)
Q Consensus        12 ~~VlITGgtGfiG~~L~~~L~~~g~~~V~~~dr~~   46 (366)
                      ++++||||+|.||+++++.|.++|+ +|++++|+.
T Consensus         1 k~vlVTGas~gIG~aia~~l~~~G~-~V~~~~r~~   34 (248)
T 3asu_A            1 MIVLVTGATAGFGECITRRFIQQGH-KVIATGRRQ   34 (248)
T ss_dssp             CEEEETTTTSTTHHHHHHHHHHTTC-EEEEEESCH
T ss_pred             CEEEEECCCChHHHHHHHHHHHCCC-EEEEEeCCH
Confidence            4799999999999999999999995 899999875

>2nwq_A Probable short-chain dehydrogenase; oxidoreductase; 2.30A {Pseudomonas aeruginosa}

Probab=97.94  E-value=1.2e-05  Score=73.22  Aligned_cols=34  Identities=21%  Similarity=0.271  Sum_probs=31.9

Q ss_pred             CeEEEEcCCChhHHHHHHHHHHcCCceEEEEecCC
Q 017760           12 KTFLVTGGLGHVGSALCLELVRRGAYQVRAFDLRT   46 (366)
Q Consensus        12 ~~VlITGgtGfiG~~L~~~L~~~g~~~V~~~dr~~   46 (366)
                      ++++||||+|.||+++++.|+++|+ +|++++|+.
T Consensus        22 k~vlVTGas~gIG~aia~~La~~G~-~V~~~~r~~   55 (272)
T 2nwq_A           22 STLFITGATSGFGEACARRFAEAGW-SLVLTGRRE   55 (272)
T ss_dssp             CEEEESSTTTSSHHHHHHHHHHTTC-EEEEEESCH
T ss_pred             cEEEEeCCCCHHHHHHHHHHHHCCC-EEEEEECCH
Confidence            7899999999999999999999995 899999875

>1yo6_A Putative carbonyl reductase sniffer; tyrosine-dependent oxidoreductase (SDR family), structural genomics, PSI; 2.60A {Caenorhabditis elegans} SCOP: c.2.1.2

Probab=97.88  E-value=1.2e-05  Score=71.57  Aligned_cols=56  Identities=18%  Similarity=0.211  Sum_probs=43.0

Q ss_pred             ccCCeEEEEcCCChhHHHHHHHHHHcC--CceEEEEecCCCCccc-ccccCCCeEEEEcc
Q 017760            9 IEGKTFLVTGGLGHVGSALCLELVRRG--AYQVRAFDLRTNSPWS-HLLINHGVHCIQGL   65 (366)
Q Consensus         9 ~~~~~VlITGgtGfiG~~L~~~L~~~g--~~~V~~~dr~~~~~~~-~~~~~~~v~~i~gD   65 (366)
                      |++++|+||||+|++|+++++.|+++|  + +|++++|+...... ......++.++.+|
T Consensus         1 m~~k~vlItGasggiG~~la~~l~~~g~~~-~V~~~~r~~~~~~~l~~~~~~~~~~~~~D   59 (250)
T 1yo6_A            1 MSPGSVVVTGANRGIGLGLVQQLVKDKNIR-HIIATARDVEKATELKSIKDSRVHVLPLT   59 (250)
T ss_dssp             CCCSEEEESSCSSHHHHHHHHHHHTCTTCC-EEEEEESSGGGCHHHHTCCCTTEEEEECC
T ss_pred             CCCCEEEEecCCchHHHHHHHHHHhcCCCc-EEEEEecCHHHHHHHHhccCCceEEEEee
Confidence            356799999999999999999999999  6 89999997543211 11113467888888

>4fgs_A Probable dehydrogenase protein; PSI-biology, nysgrc, structural genomics, NEW YORK structura genomics research consortium, three layer; 1.76A {Rhizobium etli}

Probab=97.85  E-value=5.7e-05  Score=68.84  Aligned_cols=56  Identities=25%  Similarity=0.224  Sum_probs=42.8

Q ss_pred             ccCCeEEEEcCCChhHHHHHHHHHHcCCceEEEEecCCCCccc-ccccCCCeEEEEcc
Q 017760            9 IEGKTFLVTGGLGHVGSALCLELVRRGAYQVRAFDLRTNSPWS-HLLINHGVHCIQGL   65 (366)
Q Consensus         9 ~~~~~VlITGgtGfiG~~L~~~L~~~g~~~V~~~dr~~~~~~~-~~~~~~~v~~i~gD   65 (366)
                      .++++++||||++-||+++++.|.+.|+ +|++.+|+...... ......++..+++|
T Consensus        27 L~gKvalVTGas~GIG~aiA~~la~~Ga-~V~i~~r~~~~l~~~~~~~g~~~~~~~~D   83 (273)
T 4fgs_A           27 LNAKIAVITGATSGIGLAAAKRFVAEGA-RVFITGRRKDVLDAAIAEIGGGAVGIQAD   83 (273)
T ss_dssp             TTTCEEEEESCSSHHHHHHHHHHHHTTC-EEEEEESCHHHHHHHHHHHCTTCEEEECC
T ss_pred             hCCCEEEEeCcCCHHHHHHHHHHHHCCC-EEEEEECCHHHHHHHHHHcCCCeEEEEec
Confidence            4568899999999999999999999996 89999987532211 11113567788888

>3u0b_A Oxidoreductase, short chain dehydrogenase/reducta protein; structural genomics, ssgcid; 1.70A {Mycobacterium smegmatis} PDB: 3lls_A 3v1t_C 3v1u_A* 4fw8_A* 3q6i_A* 3m1l_A

Probab=97.80  E-value=3.1e-05  Score=75.87  Aligned_cols=37  Identities=32%  Similarity=0.538  Sum_probs=33.5

Q ss_pred             ccCCeEEEEcCCChhHHHHHHHHHHcCCceEEEEecCC
Q 017760            9 IEGKTFLVTGGLGHVGSALCLELVRRGAYQVRAFDLRT   46 (366)
Q Consensus         9 ~~~~~VlITGgtGfiG~~L~~~L~~~g~~~V~~~dr~~   46 (366)
                      .++++++||||+|.||.++++.|.++|+ +|++++++.
T Consensus       211 l~gk~~LVTGgsgGIG~aiA~~La~~Ga-~Vvl~~r~~  247 (454)
T 3u0b_A          211 LDGKVAVVTGAARGIGATIAEVFARDGA-TVVAIDVDG  247 (454)
T ss_dssp             TTTCEEEESSCSSHHHHHHHHHHHHTTC-EEEEEECGG
T ss_pred             CCCCEEEEeCCchHHHHHHHHHHHHCCC-EEEEEeCCc
Confidence            3578999999999999999999999996 899998864

>1sny_A Sniffer CG10964-PA; alpha and beta protein, rossmann fold, dinucleotide binding oxidoreductase; HET: NAP; 1.75A {Drosophila melanogaster} SCOP: c.2.1.2

Probab=97.78  E-value=2.4e-05  Score=70.61  Aligned_cols=57  Identities=16%  Similarity=0.111  Sum_probs=43.1

Q ss_pred             cccCCeEEEEcCCChhHHHHHHHHHHcC---CceEEEEecCCCCccc-ccc--cCCCeEEEEcc
Q 017760            8 GIEGKTFLVTGGLGHVGSALCLELVRRG---AYQVRAFDLRTNSPWS-HLL--INHGVHCIQGL   65 (366)
Q Consensus         8 ~~~~~~VlITGgtGfiG~~L~~~L~~~g---~~~V~~~dr~~~~~~~-~~~--~~~~v~~i~gD   65 (366)
                      ..++++|+||||+|++|++++++|++.|   + +|++++|+...... ..+  ...++.++.+|
T Consensus        18 ~~~~k~vlITGasggIG~~la~~L~~~G~~~~-~V~~~~r~~~~~~~~~~l~~~~~~~~~~~~D   80 (267)
T 1sny_A           18 GSHMNSILITGCNRGLGLGLVKALLNLPQPPQ-HLFTTCRNREQAKELEDLAKNHSNIHILEID   80 (267)
T ss_dssp             --CCSEEEESCCSSHHHHHHHHHHHTSSSCCS-EEEEEESCTTSCHHHHHHHHHCTTEEEEECC
T ss_pred             CCCCCEEEEECCCCcHHHHHHHHHHhcCCCCc-EEEEEecChhhhHHHHHhhccCCceEEEEec
Confidence            3567899999999999999999999999   6 89999998654321 111  13467888888

>1xg5_A ARPG836; short chain dehydrogenase, human, SGC, structural genomics, structural genomics consortium, oxidoreductase; HET: NAP; 1.53A {Homo sapiens} SCOP: c.2.1.2

Probab=97.71  E-value=4.1e-05  Score=69.73  Aligned_cols=56  Identities=20%  Similarity=0.143  Sum_probs=41.6

Q ss_pred             ccCCeEEEEcCCChhHHHHHHHHHHcCCceEEEEecCCCCccc--ccc----cCCCeEEEEcc
Q 017760            9 IEGKTFLVTGGLGHVGSALCLELVRRGAYQVRAFDLRTNSPWS--HLL----INHGVHCIQGL   65 (366)
Q Consensus         9 ~~~~~VlITGgtGfiG~~L~~~L~~~g~~~V~~~dr~~~~~~~--~~~----~~~~v~~i~gD   65 (366)
                      +++++++||||+|++|+++++.|+++|+ +|++++|+......  ..+    ....+.++.+|
T Consensus        30 l~~k~vlVTGasggIG~~la~~l~~~G~-~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~~D   91 (279)
T 1xg5_A           30 WRDRLALVTGASGGIGAAVARALVQQGL-KVVGCARTVGNIEELAAECKSAGYPGTLIPYRCD   91 (279)
T ss_dssp             GTTCEEEEESTTSHHHHHHHHHHHHTTC-EEEEEESCHHHHHHHHHHHHHTTCSSEEEEEECC
T ss_pred             cCCCEEEEECCCchHHHHHHHHHHHCCC-EEEEEECChHHHHHHHHHHHhcCCCceEEEEEec
Confidence            5678999999999999999999999995 89999987532110  011    01346777888

>1wma_A Carbonyl reductase [NADPH] 1; oxidoreductase; HET: AB3 NDP PE5 P33; 1.24A {Homo sapiens} SCOP: c.2.1.2 PDB: 3bhi_A* 3bhj_A* 3bhm_A* 2pfg_A* 1n5d_A* 2hrb_A*

Probab=97.68  E-value=1.9e-05  Score=71.16  Aligned_cols=56  Identities=21%  Similarity=0.071  Sum_probs=42.2

Q ss_pred             ccCCeEEEEcCCChhHHHHHHHHHH-cCCceEEEEecCCCCccc--ccc--cCCCeEEEEcc
Q 017760            9 IEGKTFLVTGGLGHVGSALCLELVR-RGAYQVRAFDLRTNSPWS--HLL--INHGVHCIQGL   65 (366)
Q Consensus         9 ~~~~~VlITGgtGfiG~~L~~~L~~-~g~~~V~~~dr~~~~~~~--~~~--~~~~v~~i~gD   65 (366)
                      +++++|+||||+|+||+++++.|++ .|+ +|++++|+......  ..+  ...++.++.+|
T Consensus         2 ~~~k~vlITGasggIG~~~a~~L~~~~g~-~V~~~~r~~~~~~~~~~~l~~~~~~~~~~~~D   62 (276)
T 1wma_A            2 SGIHVALVTGGNKGIGLAIVRDLCRLFSG-DVVLTARDVTRGQAAVQQLQAEGLSPRFHQLD   62 (276)
T ss_dssp             CCCCEEEESSCSSHHHHHHHHHHHHHSSS-EEEEEESSHHHHHHHHHHHHHTTCCCEEEECC
T ss_pred             CCCCEEEEeCCCcHHHHHHHHHHHHhcCC-eEEEEeCChHHHHHHHHHHHhcCCeeEEEECC
Confidence            3568999999999999999999999 895 89999987532111  111  12467888888

>4gkb_A 3-oxoacyl-[acyl-carrier protein] reductase; putative sugar dehydrogenase, enzyme function initiative, EF structural genomics; 1.50A {Burkholderia multivorans} PDB: 4glo_A*

Probab=97.67  E-value=0.00031  Score=63.48  Aligned_cols=57  Identities=18%  Similarity=0.202  Sum_probs=45.4

Q ss_pred             cccCCeEEEEcCCChhHHHHHHHHHHcCCceEEEEecCCCCccc-c--cccCCCeEEEEcc
Q 017760            8 GIEGKTFLVTGGLGHVGSALCLELVRRGAYQVRAFDLRTNSPWS-H--LLINHGVHCIQGL   65 (366)
Q Consensus         8 ~~~~~~VlITGgtGfiG~~L~~~L~~~g~~~V~~~dr~~~~~~~-~--~~~~~~v~~i~gD   65 (366)
                      ..++++++||||++-||+++++.|.+.|+ +|++.+|+...... .  .....++.++++|
T Consensus         4 ~L~gKvalVTGas~GIG~aia~~la~~Ga-~Vv~~~r~~~~~~~~~~~~~~~~~~~~~~~D   63 (258)
T 4gkb_A            4 NLQDKVVIVTGGASGIGGAISMRLAEERA-IPVVFARHAPDGAFLDALAQRQPRATYLPVE   63 (258)
T ss_dssp             CCTTCEEEEETTTSHHHHHHHHHHHHTTC-EEEEEESSCCCHHHHHHHHHHCTTCEEEECC
T ss_pred             CCCCCEEEEeCCCCHHHHHHHHHHHHcCC-EEEEEECCcccHHHHHHHHhcCCCEEEEEee
Confidence            45679999999999999999999999996 89999998764321 1  1124578888998

>2fr1_A Erythromycin synthase, eryai; short chain dehydrogenase/reductase, oxidoreductase; HET: NDP; 1.79A {Saccharopolyspora erythraea} SCOP: c.2.1.2 c.2.1.2 PDB: 2fr0_A*

Probab=97.67  E-value=6.3e-05  Score=74.35  Aligned_cols=56  Identities=27%  Similarity=0.242  Sum_probs=41.5

Q ss_pred             cCCeEEEEcCCChhHHHHHHHHHHcCCceEEEEecCCCCcc-c----ccc--cCCCeEEEEcc
Q 017760           10 EGKTFLVTGGLGHVGSALCLELVRRGAYQVRAFDLRTNSPW-S----HLL--INHGVHCIQGL   65 (366)
Q Consensus        10 ~~~~VlITGgtGfiG~~L~~~L~~~g~~~V~~~dr~~~~~~-~----~~~--~~~~v~~i~gD   65 (366)
                      ++++++||||+|+||.+++++|.++|..+|++++|+.+... .    ..+  ...++.++.+|
T Consensus       225 ~~~~vLITGgtGgIG~~la~~La~~G~~~vvl~~R~~~~~~~~~~l~~~l~~~g~~v~~~~~D  287 (486)
T 2fr1_A          225 PTGTVLVTGGTGGVGGQIARWLARRGAPHLLLVSRSGPDADGAGELVAELEALGARTTVAACD  287 (486)
T ss_dssp             CCSEEEEETTTSHHHHHHHHHHHHHTCSEEEEEESSGGGSTTHHHHHHHHHHTTCEEEEEECC
T ss_pred             CCCEEEEECCCCHHHHHHHHHHHHcCCCEEEEEcCCCCCcHHHHHHHHHHHhcCCEEEEEEeC
Confidence            46889999999999999999999999645999998864211 0    111  12456777777

>1ooe_A Dihydropteridine reductase; structural genomics, PSI, protein structure initiative, southeast collaboratory for structural genomics; HET: MES; 1.65A {Caenorhabditis elegans} SCOP: c.2.1.2

Probab=97.66  E-value=4.2e-05  Score=67.84  Aligned_cols=49  Identities=29%  Similarity=0.411  Sum_probs=39.3

Q ss_pred             cCCeEEEEcCCChhHHHHHHHHHHcCCceEEEEecCCCCcccccccCCCeEEEEcc
Q 017760           10 EGKTFLVTGGLGHVGSALCLELVRRGAYQVRAFDLRTNSPWSHLLINHGVHCIQGL   65 (366)
Q Consensus        10 ~~~~VlITGgtGfiG~~L~~~L~~~g~~~V~~~dr~~~~~~~~~~~~~~v~~i~gD   65 (366)
                      ++++++||||+|++|+++++.|.++| ++|++++|++....      ....++.+|
T Consensus         2 ~~k~vlITGas~gIG~~~a~~l~~~G-~~V~~~~r~~~~~~------~~~~~~~~D   50 (236)
T 1ooe_A            2 SSGKVIVYGGKGALGSAILEFFKKNG-YTVLNIDLSANDQA------DSNILVDGN   50 (236)
T ss_dssp             CCEEEEEETTTSHHHHHHHHHHHHTT-EEEEEEESSCCTTS------SEEEECCTT
T ss_pred             CCCEEEEECCCcHHHHHHHHHHHHCC-CEEEEEecCccccc------cccEEEeCC
Confidence            45789999999999999999999999 58999999865321      134556666

>1dhr_A Dihydropteridine reductase; oxidoreductase(acting on NADH or NADPH); HET: NAD; 2.30A {Rattus norvegicus} SCOP: c.2.1.2 PDB: 1dir_A* 1hdr_A*

Probab=97.65  E-value=5.7e-05  Score=67.22  Aligned_cols=50  Identities=24%  Similarity=0.234  Sum_probs=39.4

Q ss_pred             ccCCeEEEEcCCChhHHHHHHHHHHcCCceEEEEecCCCCcccccccCCCeEEEEcc
Q 017760            9 IEGKTFLVTGGLGHVGSALCLELVRRGAYQVRAFDLRTNSPWSHLLINHGVHCIQGL   65 (366)
Q Consensus         9 ~~~~~VlITGgtGfiG~~L~~~L~~~g~~~V~~~dr~~~~~~~~~~~~~~v~~i~gD   65 (366)
                      .++++++||||+|+||+++++.|.++|+ +|++++|++....      ....++.+|
T Consensus         5 ~~~k~vlVTGas~gIG~~ia~~l~~~G~-~V~~~~r~~~~~~------~~~~~~~~D   54 (241)
T 1dhr_A            5 GEARRVLVYGGRGALGSRCVQAFRARNW-WVASIDVVENEEA------SASVIVKMT   54 (241)
T ss_dssp             -CCCEEEEETTTSHHHHHHHHHHHTTTC-EEEEEESSCCTTS------SEEEECCCC
T ss_pred             CCCCEEEEECCCcHHHHHHHHHHHhCCC-EEEEEeCChhhcc------CCcEEEEcC
Confidence            3467899999999999999999999995 8999999865321      134556666

>3o26_A Salutaridine reductase; short chain dehydrogenase/reductases, oxidoreductase; HET: NDP; 1.91A {Papaver somniferum} SCOP: c.2.1.0

Probab=97.60  E-value=3.7e-05  Score=70.67  Aligned_cols=57  Identities=19%  Similarity=0.114  Sum_probs=42.4

Q ss_pred             cccCCeEEEEcCCChhHHHHHHHHHHcCCceEEEEecCCCCccc--cc---ccCCCeEEEEcc
Q 017760            8 GIEGKTFLVTGGLGHVGSALCLELVRRGAYQVRAFDLRTNSPWS--HL---LINHGVHCIQGL   65 (366)
Q Consensus         8 ~~~~~~VlITGgtGfiG~~L~~~L~~~g~~~V~~~dr~~~~~~~--~~---~~~~~v~~i~gD   65 (366)
                      +.++++++||||+|.||.++++.|+++|+ +|++++|+......  ..   .....+.++.+|
T Consensus         9 ~~~~k~vlITGas~GIG~~~a~~L~~~G~-~V~~~~r~~~~~~~~~~~l~~~~~~~~~~~~~D   70 (311)
T 3o26_A            9 VTKRRCAVVTGGNKGIGFEICKQLSSNGI-MVVLTCRDVTKGHEAVEKLKNSNHENVVFHQLD   70 (311)
T ss_dssp             ---CCEEEESSCSSHHHHHHHHHHHHTTC-EEEEEESCHHHHHHHHHHHHTTTCCSEEEEECC
T ss_pred             cCCCcEEEEecCCchHHHHHHHHHHHCCC-EEEEEeCCHHHHHHHHHHHHhcCCCceEEEEcc
Confidence            45678999999999999999999999995 89999998643211  11   112468888988

>1fjh_A 3alpha-hydroxysteroid dehydrogenase/carbonyl reductase; short chain dehydrogenase, SDR, xenobiotic, metyrapone, oligomerisation; 1.68A {Comamonas testosteroni} SCOP: c.2.1.2 PDB: 1fk8_A*

Probab=97.59  E-value=6.6e-05  Score=67.22  Aligned_cols=36  Identities=22%  Similarity=0.315  Sum_probs=32.9

Q ss_pred             CCeEEEEcCCChhHHHHHHHHHHcCCceEEEEecCCC
Q 017760           11 GKTFLVTGGLGHVGSALCLELVRRGAYQVRAFDLRTN   47 (366)
Q Consensus        11 ~~~VlITGgtGfiG~~L~~~L~~~g~~~V~~~dr~~~   47 (366)
                      |++++||||+|+||+++++.|+++|+ +|++++|+..
T Consensus         1 mk~vlVTGas~gIG~~~a~~l~~~G~-~V~~~~r~~~   36 (257)
T 1fjh_A            1 MSIIVISGCATGIGAATRKVLEAAGH-QIVGIDIRDA   36 (257)
T ss_dssp             CCEEEEETTTSHHHHHHHHHHHHTTC-EEEEEESSSS
T ss_pred             CCEEEEeCCCCHHHHHHHHHHHHCCC-EEEEEeCCch
Confidence            46899999999999999999999995 8999999864

>2jah_A Clavulanic acid dehydrogenase; short-chain dehydrogenase/reductase, lactamase inhibitor, AN biosynthesis, NADPH, oxidoreductase; HET: MSE NDP; 1.80A {Streptomyces clavuligerus} PDB: 2jap_A*

Probab=97.57  E-value=4.7e-05  Score=68.12  Aligned_cols=56  Identities=27%  Similarity=0.314  Sum_probs=42.5

Q ss_pred             ccCCeEEEEcCCChhHHHHHHHHHHcCCceEEEEecCCCCccc--ccc--cCCCeEEEEcc
Q 017760            9 IEGKTFLVTGGLGHVGSALCLELVRRGAYQVRAFDLRTNSPWS--HLL--INHGVHCIQGL   65 (366)
Q Consensus         9 ~~~~~VlITGgtGfiG~~L~~~L~~~g~~~V~~~dr~~~~~~~--~~~--~~~~v~~i~gD   65 (366)
                      +++++++||||+|.+|+++++.|.++|+ +|++++|+......  ..+  ...++.++++|
T Consensus         5 l~~k~~lVTGas~gIG~aia~~l~~~G~-~V~~~~r~~~~~~~~~~~l~~~~~~~~~~~~D   64 (247)
T 2jah_A            5 LQGKVALITGASSGIGEATARALAAEGA-AVAIAARRVEKLRALGDELTAAGAKVHVLELD   64 (247)
T ss_dssp             TTTCEEEEESCSSHHHHHHHHHHHHTTC-EEEEEESCHHHHHHHHHHHHHTTCCEEEEECC
T ss_pred             CCCCEEEEECCCCHHHHHHHHHHHHCCC-EEEEEECCHHHHHHHHHHHHhcCCcEEEEECC
Confidence            5568999999999999999999999995 89999987532110  111  13467888888

>4h15_A Short chain alcohol dehydrogenase-related dehydro; structural genomics, PSI-biology, nysgrc; HET: MSE; 1.45A {Sinorhizobium meliloti} PDB: 4h16_A*

Probab=97.56  E-value=0.00051  Score=62.12  Aligned_cols=39  Identities=28%  Similarity=0.315  Sum_probs=35.2

Q ss_pred             ccCCeEEEEcCCChhHHHHHHHHHHcCCceEEEEecCCCC
Q 017760            9 IEGKTFLVTGGLGHVGSALCLELVRRGAYQVRAFDLRTNS   48 (366)
Q Consensus         9 ~~~~~VlITGgtGfiG~~L~~~L~~~g~~~V~~~dr~~~~   48 (366)
                      .++++++||||++-||.++++.|.+.|+ +|++.+|+...
T Consensus         9 L~GK~alVTGas~GIG~aia~~la~~Ga-~V~~~~r~~~~   47 (261)
T 4h15_A            9 LRGKRALITAGTKGAGAATVSLFLELGA-QVLTTARARPE   47 (261)
T ss_dssp             CTTCEEEESCCSSHHHHHHHHHHHHTTC-EEEEEESSCCT
T ss_pred             CCCCEEEEeccCcHHHHHHHHHHHHcCC-EEEEEECCchh
Confidence            4679999999999999999999999996 89999997653

>1zem_A Xylitol dehydrogenase; rossmann fold, dinucleotide-binding domain, oxidoreductase; HET: NAD; 1.90A {Gluconobacter oxydans} SCOP: c.2.1.2

Probab=97.53  E-value=5.6e-05  Score=68.23  Aligned_cols=56  Identities=23%  Similarity=0.300  Sum_probs=42.2

Q ss_pred             ccCCeEEEEcCCChhHHHHHHHHHHcCCceEEEEecCCCCccc--ccc--cCCCeEEEEcc
Q 017760            9 IEGKTFLVTGGLGHVGSALCLELVRRGAYQVRAFDLRTNSPWS--HLL--INHGVHCIQGL   65 (366)
Q Consensus         9 ~~~~~VlITGgtGfiG~~L~~~L~~~g~~~V~~~dr~~~~~~~--~~~--~~~~v~~i~gD   65 (366)
                      +++++++||||+|.+|+++++.|+++|+ +|++++|+......  ..+  ...++.++++|
T Consensus         5 l~~k~vlVTGas~gIG~~ia~~l~~~G~-~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~D   64 (262)
T 1zem_A            5 FNGKVCLVTGAGGNIGLATALRLAEEGT-AIALLDMNREALEKAEASVREKGVEARSYVCD   64 (262)
T ss_dssp             TTTCEEEEETTTSHHHHHHHHHHHHTTC-EEEEEESCHHHHHHHHHHHHTTTSCEEEEECC
T ss_pred             cCCCEEEEeCCCcHHHHHHHHHHHHCCC-EEEEEeCCHHHHHHHHHHHHhcCCcEEEEEec
Confidence            5678999999999999999999999995 89999987532110  111  12357778888

>3e03_A Short chain dehydrogenase; structural genomics, PSI-2, protein structure initiative, NEW YORK structural genomix research consortium; 1.69A {Xanthomonas campestris PV}

Probab=97.53  E-value=0.0002  Score=65.02  Aligned_cols=57  Identities=23%  Similarity=0.244  Sum_probs=44.0

Q ss_pred             cccCCeEEEEcCCChhHHHHHHHHHHcCCceEEEEecCCCCccc-----cc------ccCCCeEEEEcc
Q 017760            8 GIEGKTFLVTGGLGHVGSALCLELVRRGAYQVRAFDLRTNSPWS-----HL------LINHGVHCIQGL   65 (366)
Q Consensus         8 ~~~~~~VlITGgtGfiG~~L~~~L~~~g~~~V~~~dr~~~~~~~-----~~------~~~~~v~~i~gD   65 (366)
                      .+++++++||||+|.||+++++.|.++|+ +|++++|+......     ..      ....++.++++|
T Consensus         3 ~l~~k~~lVTGas~GIG~aia~~la~~G~-~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~D   70 (274)
T 3e03_A            3 TLSGKTLFITGASRGIGLAIALRAARDGA-NVAIAAKSAVANPKLPGTIHSAAAAVNAAGGQGLALKCD   70 (274)
T ss_dssp             CCTTCEEEEETTTSHHHHHHHHHHHHTTC-EEEEEESCCSCCTTSCCCHHHHHHHHHHHTSEEEEEECC
T ss_pred             CCCCcEEEEECCCChHHHHHHHHHHHCCC-EEEEEeccchhhhhhHHHHHHHHHHHHhcCCeEEEEeCC
Confidence            35678999999999999999999999995 89999998754211     00      013467788888

>4fn4_A Short chain dehydrogenase; NADH-binding, rossmann fold, oxidoreductase; HET: NAD; 1.75A {Sulfolobus acidocaldarius}

Probab=97.52  E-value=0.00029  Score=63.48  Aligned_cols=57  Identities=19%  Similarity=0.251  Sum_probs=44.2

Q ss_pred             cccCCeEEEEcCCChhHHHHHHHHHHcCCceEEEEecCCCCccc--ccc--cCCCeEEEEcc
Q 017760            8 GIEGKTFLVTGGLGHVGSALCLELVRRGAYQVRAFDLRTNSPWS--HLL--INHGVHCIQGL   65 (366)
Q Consensus         8 ~~~~~~VlITGgtGfiG~~L~~~L~~~g~~~V~~~dr~~~~~~~--~~~--~~~~v~~i~gD   65 (366)
                      ..++++++||||++-||+++++.|.+.|+ +|++.||+......  ..+  ...++.++++|
T Consensus         4 sL~gKvalVTGas~GIG~aiA~~la~~Ga-~Vv~~~~~~~~~~~~~~~i~~~g~~~~~~~~D   64 (254)
T 4fn4_A            4 SLKNKVVIVTGAGSGIGRAIAKKFALNDS-IVVAVELLEDRLNQIVQELRGMGKEVLGVKAD   64 (254)
T ss_dssp             GGTTCEEEEETTTSHHHHHHHHHHHHTTC-EEEEEESCHHHHHHHHHHHHHTTCCEEEEECC
T ss_pred             CCCCCEEEEeCCCCHHHHHHHHHHHHcCC-EEEEEECCHHHHHHHHHHHHhcCCcEEEEEcc
Confidence            35679999999999999999999999996 89999997532211  111  23567888999

>2qq5_A DHRS1, dehydrogenase/reductase SDR family member 1; short-chain, structura genomics consortium, SGC, oxidoreductase; 1.80A {Homo sapiens}

Probab=97.51  E-value=4.8e-05  Score=68.56  Aligned_cols=56  Identities=18%  Similarity=0.229  Sum_probs=42.5

Q ss_pred             ccCCeEEEEcCCChhHHHHHHHHHHcCCceEEEEecCCCCccc--ccc--cCCCeEEEEcc
Q 017760            9 IEGKTFLVTGGLGHVGSALCLELVRRGAYQVRAFDLRTNSPWS--HLL--INHGVHCIQGL   65 (366)
Q Consensus         9 ~~~~~VlITGgtGfiG~~L~~~L~~~g~~~V~~~dr~~~~~~~--~~~--~~~~v~~i~gD   65 (366)
                      +++++++||||+|+||+++++.|+++|+ +|++++|+......  ..+  ...++.++++|
T Consensus         3 l~~k~vlVTGas~gIG~~ia~~l~~~G~-~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~D   62 (260)
T 2qq5_A            3 MNGQVCVVTGASRGIGRGIALQLCKAGA-TVYITGRHLDTLRVVAQEAQSLGGQCVPVVCD   62 (260)
T ss_dssp             TTTCEEEESSTTSHHHHHHHHHHHHTTC-EEEEEESCHHHHHHHHHHHHHHSSEEEEEECC
T ss_pred             CCCCEEEEeCCCchHHHHHHHHHHHCCC-EEEEEeCCHHHHHHHHHHHHHcCCceEEEECC
Confidence            4568999999999999999999999995 89999987532110  111  13467888888

>4hp8_A 2-deoxy-D-gluconate 3-dehydrogenase; enzyme function initiative, EFI, structural genomics, oxidor; HET: NAP; 1.35A {Agrobacterium tumefaciens}

Probab=97.50  E-value=0.00026  Score=63.40  Aligned_cols=56  Identities=23%  Similarity=0.267  Sum_probs=43.5

Q ss_pred             ccCCeEEEEcCCChhHHHHHHHHHHcCCceEEEEecCCCCcccccc--cCCCeEEEEcc
Q 017760            9 IEGKTFLVTGGLGHVGSALCLELVRRGAYQVRAFDLRTNSPWSHLL--INHGVHCIQGL   65 (366)
Q Consensus         9 ~~~~~VlITGgtGfiG~~L~~~L~~~g~~~V~~~dr~~~~~~~~~~--~~~~v~~i~gD   65 (366)
                      .++++++||||++-||.++++.|.+.|+ +|.+.||+.........  ...++..+++|
T Consensus         7 L~GKvalVTGas~GIG~aiA~~la~~Ga-~Vvi~~r~~~~~~~~~~~~~g~~~~~~~~D   64 (247)
T 4hp8_A            7 LEGRKALVTGANTGLGQAIAVGLAAAGA-EVVCAARRAPDETLDIIAKDGGNASALLID   64 (247)
T ss_dssp             CTTCEEEETTTTSHHHHHHHHHHHHTTC-EEEEEESSCCHHHHHHHHHTTCCEEEEECC
T ss_pred             CCCCEEEEeCcCCHHHHHHHHHHHHcCC-EEEEEeCCcHHHHHHHHHHhCCcEEEEEcc
Confidence            5679999999999999999999999996 89999998643211111  23467777887

>3i1j_A Oxidoreductase, short chain dehydrogenase/reducta; dimer, MIXE beta, structural genomics, PSI-2; 1.90A {Pseudomonas syringae PV} SCOP: c.2.1.0

Probab=97.49  E-value=0.00011  Score=65.34  Aligned_cols=40  Identities=28%  Similarity=0.385  Sum_probs=35.7

Q ss_pred             ccccCCeEEEEcCCChhHHHHHHHHHHcCCceEEEEecCCC
Q 017760            7 EGIEGKTFLVTGGLGHVGSALCLELVRRGAYQVRAFDLRTN   47 (366)
Q Consensus         7 ~~~~~~~VlITGgtGfiG~~L~~~L~~~g~~~V~~~dr~~~   47 (366)
                      +.+++++++||||+|.+|+++++.|+++|+ +|++++|+..
T Consensus        10 ~~l~~k~vlITGas~gIG~~ia~~l~~~G~-~V~~~~r~~~   49 (247)
T 3i1j_A           10 ELLKGRVILVTGAARGIGAAAARAYAAHGA-SVVLLGRTEA   49 (247)
T ss_dssp             TTTTTCEEEESSTTSHHHHHHHHHHHHTTC-EEEEEESCHH
T ss_pred             ccCCCCEEEEeCCCChHHHHHHHHHHHCCC-EEEEEecCHH
Confidence            446788999999999999999999999995 8999998753

>3ic5_A Putative saccharopine dehydrogenase; structural genomics, APC63807.2, N-terminal domain, saccharo dehydrogenase, PSI-2; HET: MSE; 2.08A {Ruegeria pomeroyi}

Probab=97.49  E-value=7.2e-05  Score=58.26  Aligned_cols=52  Identities=23%  Similarity=0.230  Sum_probs=38.9

Q ss_pred             CCeEEEEcCCChhHHHHHHHHHHcCCceEEEEecCCCCcccccccCCCeEEEEcc
Q 017760           11 GKTFLVTGGLGHVGSALCLELVRRGAYQVRAFDLRTNSPWSHLLINHGVHCIQGL   65 (366)
Q Consensus        11 ~~~VlITGgtGfiG~~L~~~L~~~g~~~V~~~dr~~~~~~~~~~~~~~v~~i~gD   65 (366)
                      +++|+|+|+ |++|+++++.|.+.|.++|+++++++...  ......+++.+.+|
T Consensus         5 ~~~v~I~G~-G~iG~~~~~~l~~~g~~~v~~~~r~~~~~--~~~~~~~~~~~~~d   56 (118)
T 3ic5_A            5 RWNICVVGA-GKIGQMIAALLKTSSNYSVTVADHDLAAL--AVLNRMGVATKQVD   56 (118)
T ss_dssp             CEEEEEECC-SHHHHHHHHHHHHCSSEEEEEEESCHHHH--HHHHTTTCEEEECC
T ss_pred             cCeEEEECC-CHHHHHHHHHHHhCCCceEEEEeCCHHHH--HHHHhCCCcEEEec
Confidence            478999999 99999999999999944899999875322  22223455666665

>4g81_D Putative hexonate dehydrogenase; enzyme function initiative, EFI, structural genomics, dehydr oxidoreductase; 1.90A {Salmonella enterica subsp}

Probab=97.49  E-value=5.5e-05  Score=68.27  Aligned_cols=56  Identities=30%  Similarity=0.261  Sum_probs=43.0

Q ss_pred             ccCCeEEEEcCCChhHHHHHHHHHHcCCceEEEEecCCCCccc--ccc--cCCCeEEEEcc
Q 017760            9 IEGKTFLVTGGLGHVGSALCLELVRRGAYQVRAFDLRTNSPWS--HLL--INHGVHCIQGL   65 (366)
Q Consensus         9 ~~~~~VlITGgtGfiG~~L~~~L~~~g~~~V~~~dr~~~~~~~--~~~--~~~~v~~i~gD   65 (366)
                      .++++++||||++-||+++++.|.+.|+ +|.+.||+......  ..+  ...++..+++|
T Consensus         7 L~gKvalVTGas~GIG~aia~~la~~Ga-~Vvi~~~~~~~~~~~~~~l~~~g~~~~~~~~D   66 (255)
T 4g81_D            7 LTGKTALVTGSARGLGFAYAEGLAAAGA-RVILNDIRATLLAESVDTLTRKGYDAHGVAFD   66 (255)
T ss_dssp             CTTCEEEETTCSSHHHHHHHHHHHHTTC-EEEECCSCHHHHHHHHHHHHHTTCCEEECCCC
T ss_pred             CCCCEEEEeCCCcHHHHHHHHHHHHCCC-EEEEEECCHHHHHHHHHHHHhcCCcEEEEEee
Confidence            4679999999999999999999999996 89999987532111  111  13467778888

>3nyw_A Putative oxidoreductase; fatty acid synthesis,3-oxoacyl-[ACP] reductase, NADP+ bindin rossman fold, PSI-II, nysgxrc; 2.16A {Bacteroides thetaiotaomicron}

Probab=97.47  E-value=7.5e-05  Score=66.99  Aligned_cols=56  Identities=11%  Similarity=0.043  Sum_probs=43.0

Q ss_pred             ccCCeEEEEcCCChhHHHHHHHHHHcCCceEEEEecCCCCccc--ccc-----cCCCeEEEEcc
Q 017760            9 IEGKTFLVTGGLGHVGSALCLELVRRGAYQVRAFDLRTNSPWS--HLL-----INHGVHCIQGL   65 (366)
Q Consensus         9 ~~~~~VlITGgtGfiG~~L~~~L~~~g~~~V~~~dr~~~~~~~--~~~-----~~~~v~~i~gD   65 (366)
                      +++++++||||+|.||.++++.|.+.|+ +|++++|+......  ..+     ...++.++.+|
T Consensus         5 ~~~k~~lVTGas~GIG~aia~~l~~~G~-~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~~~D   67 (250)
T 3nyw_A            5 KQKGLAIITGASQGIGAVIAAGLATDGY-RVVLIARSKQNLEKVHDEIMRSNKHVQEPIVLPLD   67 (250)
T ss_dssp             CCCCEEEEESTTSHHHHHHHHHHHHHTC-EEEEEESCHHHHHHHHHHHHHHCTTSCCCEEEECC
T ss_pred             CCCCEEEEECCCcHHHHHHHHHHHHCCC-EEEEEECCHHHHHHHHHHHHHhccccCcceEEecc
Confidence            4568999999999999999999999995 89999987543211  111     11567888998

>1xu9_A Corticosteroid 11-beta-dehydrogenase, isozyme 1; hydroxysteroid, SDR, oxidoreductase; HET: NDP CPS MES; 1.55A {Homo sapiens} SCOP: c.2.1.2 PDB: 1xu7_A* 3bzu_A* 3czr_A* 3d3e_A* 3d4n_A* 3fco_A* 3frj_A* 3h6k_A* 3hfg_A* 3oq1_A* 3qqp_A* 3pdj_A* 3d5q_A* 2rbe_A* 3byz_A* 3ey4_A* 3tfq_A* 3ch6_A* 2irw_A* 2ilt_A* ...

Probab=97.46  E-value=0.0001  Score=67.33  Aligned_cols=57  Identities=23%  Similarity=0.299  Sum_probs=42.7

Q ss_pred             cccCCeEEEEcCCChhHHHHHHHHHHcCCceEEEEecCCCCccc--ccc---cCCCeEEEEcc
Q 017760            8 GIEGKTFLVTGGLGHVGSALCLELVRRGAYQVRAFDLRTNSPWS--HLL---INHGVHCIQGL   65 (366)
Q Consensus         8 ~~~~~~VlITGgtGfiG~~L~~~L~~~g~~~V~~~dr~~~~~~~--~~~---~~~~v~~i~gD   65 (366)
                      .+++++|+||||+|++|+++++.|+++|+ +|++++|+......  ..+   ...++.++.+|
T Consensus        25 ~~~~k~vlITGasggIG~~la~~l~~~G~-~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~D   86 (286)
T 1xu9_A           25 MLQGKKVIVTGASKGIGREMAYHLAKMGA-HVVVTARSKETLQKVVSHCLELGAASAHYIAGT   86 (286)
T ss_dssp             GGTTCEEEESSCSSHHHHHHHHHHHHTTC-EEEEEESCHHHHHHHHHHHHHHTCSEEEEEECC
T ss_pred             hcCCCEEEEeCCCcHHHHHHHHHHHHCCC-EEEEEECCHHHHHHHHHHHHHhCCCceEEEeCC
Confidence            35678999999999999999999999995 89999987532211  000   11357788888

>1e7w_A Pteridine reductase; dihydrofolate reductase, shortchain dehydrogenase, methotrexate resistance, oxidoreductase; HET: NDP MTX; 1.75A {Leishmania major} SCOP: c.2.1.2 PDB: 1w0c_A* 1e92_A* 2bf7_A* 2bfa_A* 2bfm_A* 2bfo_A* 2bfp_A* 2p8k_A* 3h4v_A* 2xox_A 1p33_A*

Probab=97.43  E-value=7.2e-05  Score=68.70  Aligned_cols=58  Identities=17%  Similarity=0.087  Sum_probs=42.1

Q ss_pred             ccccCCeEEEEcCCChhHHHHHHHHHHcCCceEEEEe-cCCCCccc--ccc---cCCCeEEEEcc
Q 017760            7 EGIEGKTFLVTGGLGHVGSALCLELVRRGAYQVRAFD-LRTNSPWS--HLL---INHGVHCIQGL   65 (366)
Q Consensus         7 ~~~~~~~VlITGgtGfiG~~L~~~L~~~g~~~V~~~d-r~~~~~~~--~~~---~~~~v~~i~gD   65 (366)
                      ..+++++++||||+|.||+++++.|+++|+ +|++++ |+......  ..+   ...++.++++|
T Consensus         5 ~~l~~k~~lVTGas~GIG~aia~~la~~G~-~V~~~~~r~~~~~~~~~~~l~~~~~~~~~~~~~D   68 (291)
T 1e7w_A            5 TAPTVPVALVTGAAKRLGRSIAEGLHAEGY-AVCLHYHRSAAEANALSATLNARRPNSAITVQAD   68 (291)
T ss_dssp             ---CCCEEEETTCSSHHHHHHHHHHHHTTC-EEEEEESSCHHHHHHHHHHHHHHSTTCEEEEECC
T ss_pred             cCCCCCEEEEECCCchHHHHHHHHHHHCCC-eEEEEcCCCHHHHHHHHHHHhhhcCCeeEEEEee
Confidence            345678999999999999999999999995 899999 76432110  111   13467888888

>2h7i_A Enoyl-[acyl-carrier-protein] reductase [NADH]; oxidoreductase, INHA, enoyl acyl carrier reductase, pyrrolid carboxamide; HET: NAD 566; 1.62A {Mycobacterium tuberculosis} SCOP: c.2.1.2 PDB: 1p44_A* 1p45_A* 2b35_A* 2b36_A* 2b37_A* 2aq8_A* 2h7l_A* 2h7m_A* 2h7n_A* 2h7p_A* 2nsd_A* 2pr2_A* 2x22_A* 2x23_A* 3fne_A* 3fnf_A* 3fng_A* 3fnh_A* 3oew_A* 2aqh_A* ...

Probab=97.43  E-value=0.00011  Score=66.44  Aligned_cols=56  Identities=14%  Similarity=0.060  Sum_probs=42.2

Q ss_pred             ccCCeEEEEcC--CChhHHHHHHHHHHcCCceEEEEecCCCCc--ccccccCCCeEEEEcc
Q 017760            9 IEGKTFLVTGG--LGHVGSALCLELVRRGAYQVRAFDLRTNSP--WSHLLINHGVHCIQGL   65 (366)
Q Consensus         9 ~~~~~VlITGg--tGfiG~~L~~~L~~~g~~~V~~~dr~~~~~--~~~~~~~~~v~~i~gD   65 (366)
                      +++++++||||  +|.||+++++.|.+.|+ +|++++|+....  ........++.++++|
T Consensus         5 l~~k~vlVTGa~~s~gIG~aia~~l~~~G~-~V~~~~r~~~~~~~~~~~~~~~~~~~~~~D   64 (269)
T 2h7i_A            5 LDGKRILVSGIITDSSIAFHIARVAQEQGA-QLVLTGFDRLRLIQRITDRLPAKAPLLELD   64 (269)
T ss_dssp             TTTCEEEECCCSSTTSHHHHHHHHHHHTTC-EEEEEECSCHHHHHHHHTTSSSCCCEEECC
T ss_pred             cCCCEEEEECCCCCCchHHHHHHHHHHCCC-EEEEEecChHHHHHHHHHhcCCCceEEEcc
Confidence            45689999999  99999999999999995 899999876321  1111113457778888

>3kvo_A Hydroxysteroid dehydrogenase-like protein 2; HSDL2, human hydroxysteroid dehydrogenase like 2, SDHL2, STR genomics, structural genomics consortium; HET: NAP; 2.25A {Homo sapiens}

Probab=97.40  E-value=0.00022  Score=67.29  Aligned_cols=56  Identities=16%  Similarity=0.147  Sum_probs=43.7

Q ss_pred             ccCCeEEEEcCCChhHHHHHHHHHHcCCceEEEEecCCCCccc---------c--cccCCCeEEEEcc
Q 017760            9 IEGKTFLVTGGLGHVGSALCLELVRRGAYQVRAFDLRTNSPWS---------H--LLINHGVHCIQGL   65 (366)
Q Consensus         9 ~~~~~VlITGgtGfiG~~L~~~L~~~g~~~V~~~dr~~~~~~~---------~--~~~~~~v~~i~gD   65 (366)
                      +++++++||||+|.||.++++.|+++|+ +|++++|+......         .  .....++.++++|
T Consensus        43 l~gk~vlVTGas~GIG~aia~~La~~Ga-~Vvl~~r~~~~~~~l~~~l~~~~~~~~~~g~~~~~~~~D  109 (346)
T 3kvo_A           43 LAGCTVFITGASRGIGKAIALKAAKDGA-NIVIAAKTAQPHPKLLGTIYTAAEEIEAVGGKALPCIVD  109 (346)
T ss_dssp             TTTCEEEEETTTSHHHHHHHHHHHTTTC-EEEEEESCCSCCSSSCCCHHHHHHHHHHTTCEEEEEECC
T ss_pred             CCCCEEEEeCCChHHHHHHHHHHHHCCC-EEEEEECChhhhhhhHHHHHHHHHHHHhcCCeEEEEEcc
Confidence            4568999999999999999999999995 89999998754211         0  0113467888899

>2x9g_A PTR1, pteridine reductase; short chain dehydrogenase, oxidoreductase; HET: NAP LYA; 1.10A {Trypanosoma brucei brucei} PDB: 2x9n_A* 2x9v_A* 3bmc_A* 3bmd_A* 3bme_A* 3bmf_A* 3bmg_A* 3bmh_A* 3bmi_A* 3bmj_A* 3bmk_A* 3bml_A* 3bmm_A* 3bmn_A* 3bmo_A* 3bmq_A* 3bmr_A* 3gn1_A* 3gn2_A* 3jq6_A* ...

Probab=97.32  E-value=0.00017  Score=65.98  Aligned_cols=56  Identities=20%  Similarity=0.204  Sum_probs=41.4

Q ss_pred             ccCCeEEEEcCCChhHHHHHHHHHHcCCceEEEEecCC-CCccc--cc---ccCCCeEEEEcc
Q 017760            9 IEGKTFLVTGGLGHVGSALCLELVRRGAYQVRAFDLRT-NSPWS--HL---LINHGVHCIQGL   65 (366)
Q Consensus         9 ~~~~~VlITGgtGfiG~~L~~~L~~~g~~~V~~~dr~~-~~~~~--~~---~~~~~v~~i~gD   65 (366)
                      +++++++||||+|.||+++++.|+++|+ +|++++|+. .....  ..   .....+.++++|
T Consensus        21 l~~k~~lVTGas~gIG~aia~~L~~~G~-~V~~~~r~~~~~~~~~~~~l~~~~~~~~~~~~~D   82 (288)
T 2x9g_A           21 MEAPAAVVTGAAKRIGRAIAVKLHQTGY-RVVIHYHNSAEAAVSLADELNKERSNTAVVCQAD   82 (288)
T ss_dssp             -CCCEEEETTCSSHHHHHHHHHHHHHTC-EEEEEESSCHHHHHHHHHHHHHHSTTCEEEEECC
T ss_pred             CCCCEEEEeCCCCHHHHHHHHHHHHCCC-eEEEEeCCchHHHHHHHHHHHhhcCCceEEEEee
Confidence            5678999999999999999999999995 899999986 22110  11   113456777777

>1y7t_A Malate dehydrogenase; NAD-dependent-MDH-NADPH complex, oxidoreductase; HET: NDP; 1.65A {Thermus thermophilus} SCOP: c.2.1.5 d.162.1.1 PDB: 1iz9_A* 2cvq_A* 1bmd_A* 1bdm_A* 1wze_A* 1wzi_A*

Probab=97.30  E-value=0.00013  Score=68.16  Aligned_cols=36  Identities=17%  Similarity=0.319  Sum_probs=31.7

Q ss_pred             CCeEEEEcCCChhHHHHHHHHHHcCC------ceEEEEecCC
Q 017760           11 GKTFLVTGGLGHVGSALCLELVRRGA------YQVRAFDLRT   46 (366)
Q Consensus        11 ~~~VlITGgtGfiG~~L~~~L~~~g~------~~V~~~dr~~   46 (366)
                      .|||+||||+||+|++++..|+++|.      ++|+++|+.+
T Consensus         4 ~mkVlVtGaaGfIG~~l~~~L~~~g~~~~~~~~ev~l~D~~~   45 (327)
T 1y7t_A            4 PVRVAVTGAAGQIGYSLLFRIAAGEMLGKDQPVILQLLEIPQ   45 (327)
T ss_dssp             CEEEEESSTTSHHHHHHHHHHHTTTTTCTTCCEEEEEECCGG
T ss_pred             CCEEEEECCCCHHHHHHHHHHHhCCCCCCCCCCEEEEEeCCC
Confidence            36899999999999999999999884      2899999864

>4dry_A 3-oxoacyl-[acyl-carrier-protein] reductase; structural genomics, PSI-biology, NEW YORK structural genomi research consortium, nysgrc; 2.50A {Sinorhizobium meliloti}

Probab=97.29  E-value=0.00018  Score=65.64  Aligned_cols=56  Identities=25%  Similarity=0.194  Sum_probs=40.1

Q ss_pred             ccCCeEEEEcCCChhHHHHHHHHHHcCCceEEEEecCCCCccc--ccc---cCCCeEEEEcc
Q 017760            9 IEGKTFLVTGGLGHVGSALCLELVRRGAYQVRAFDLRTNSPWS--HLL---INHGVHCIQGL   65 (366)
Q Consensus         9 ~~~~~VlITGgtGfiG~~L~~~L~~~g~~~V~~~dr~~~~~~~--~~~---~~~~v~~i~gD   65 (366)
                      +++++++||||+|.||.++++.|.+.|+ +|++++|+......  ..+   ....+.++++|
T Consensus        31 l~gk~~lVTGas~GIG~aia~~la~~G~-~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~D   91 (281)
T 4dry_A           31 GEGRIALVTGGGTGVGRGIAQALSAEGY-SVVITGRRPDVLDAAAGEIGGRTGNIVRAVVCD   91 (281)
T ss_dssp             ---CEEEETTTTSHHHHHHHHHHHHTTC-EEEEEESCHHHHHHHHHHHHHHHSSCEEEEECC
T ss_pred             CCCCEEEEeCCCCHHHHHHHHHHHHCCC-EEEEEECCHHHHHHHHHHHHhcCCCeEEEEEcC
Confidence            3568999999999999999999999995 89999987542211  011   11235788888

>3llv_A Exopolyphosphatase-related protein; NAD(P)-binding, rossmann, PSI, M structural genomics; 1.70A {Archaeoglobus fulgidus}

Probab=97.28  E-value=0.00012  Score=59.42  Aligned_cols=52  Identities=25%  Similarity=0.326  Sum_probs=37.7

Q ss_pred             cCCeEEEEcCCChhHHHHHHHHHHcCCceEEEEecCCCCcccccccCCCeEEEEcc
Q 017760           10 EGKTFLVTGGLGHVGSALCLELVRRGAYQVRAFDLRTNSPWSHLLINHGVHCIQGL   65 (366)
Q Consensus        10 ~~~~VlITGgtGfiG~~L~~~L~~~g~~~V~~~dr~~~~~~~~~~~~~~v~~i~gD   65 (366)
                      +|++|+|+|+ |.+|+++++.|.+.| ++|+++|+++...  ......++.++.+|
T Consensus         5 ~~~~v~I~G~-G~iG~~la~~L~~~g-~~V~~id~~~~~~--~~~~~~~~~~~~gd   56 (141)
T 3llv_A            5 GRYEYIVIGS-EAAGVGLVRELTAAG-KKVLAVDKSKEKI--ELLEDEGFDAVIAD   56 (141)
T ss_dssp             -CCSEEEECC-SHHHHHHHHHHHHTT-CCEEEEESCHHHH--HHHHHTTCEEEECC
T ss_pred             CCCEEEEECC-CHHHHHHHHHHHHCC-CeEEEEECCHHHH--HHHHHCCCcEEECC
Confidence            4578999987 999999999999999 4899999875321  22222345556665

>1oaa_A Sepiapterin reductase; tetrahydrobiopterin, oxidoreductase; HET: NAP; 1.25A {Mus musculus} SCOP: c.2.1.2 PDB: 1nas_A* 1sep_A* 1z6z_A*

Probab=97.27  E-value=0.0001  Score=66.22  Aligned_cols=56  Identities=18%  Similarity=0.096  Sum_probs=42.2

Q ss_pred             ccCCeEEEEcCCChhHHHHHHHHHH---cCCceEEEEecCCCCccc--cccc----CCCeEEEEcc
Q 017760            9 IEGKTFLVTGGLGHVGSALCLELVR---RGAYQVRAFDLRTNSPWS--HLLI----NHGVHCIQGL   65 (366)
Q Consensus         9 ~~~~~VlITGgtGfiG~~L~~~L~~---~g~~~V~~~dr~~~~~~~--~~~~----~~~v~~i~gD   65 (366)
                      +++++++||||+|.||+++++.|.+   .|+ +|++++|+......  ..+.    ..++.++++|
T Consensus         4 l~~k~~lVTGas~gIG~~ia~~l~~~~~~G~-~V~~~~r~~~~~~~~~~~l~~~~~~~~~~~~~~D   68 (259)
T 1oaa_A            4 LGCAVCVLTGASRGFGRALAPQLARLLSPGS-VMLVSARSESMLRQLKEELGAQQPDLKVVLAAAD   68 (259)
T ss_dssp             CBSEEEEESSCSSHHHHHHHHHHHTTBCTTC-EEEEEESCHHHHHHHHHHHHHHCTTSEEEEEECC
T ss_pred             CCCcEEEEeCCCChHHHHHHHHHHHhhcCCC-eEEEEeCCHHHHHHHHHHHHhhCCCCeEEEEecC
Confidence            4568899999999999999999999   895 89999987532111  1110    3457888888

>2qhx_A Pteridine reductase 1; oxidoreductase, short-chain dehydrogenase/reductase, trypanosomatid, pterin salvage, drug resistance; HET: NAP FE1; 2.61A {Leishmania major} SCOP: c.2.1.2

Probab=97.26  E-value=0.00013  Score=68.19  Aligned_cols=56  Identities=18%  Similarity=0.087  Sum_probs=41.6

Q ss_pred             ccCCeEEEEcCCChhHHHHHHHHHHcCCceEEEEe-cCCCCccc--ccc---cCCCeEEEEcc
Q 017760            9 IEGKTFLVTGGLGHVGSALCLELVRRGAYQVRAFD-LRTNSPWS--HLL---INHGVHCIQGL   65 (366)
Q Consensus         9 ~~~~~VlITGgtGfiG~~L~~~L~~~g~~~V~~~d-r~~~~~~~--~~~---~~~~v~~i~gD   65 (366)
                      +++++++||||+|.||+++++.|+++|+ +|++++ |+......  ..+   ...++.++++|
T Consensus        44 l~~k~~lVTGas~GIG~aia~~La~~G~-~Vv~~~~r~~~~~~~~~~~l~~~~~~~~~~~~~D  105 (328)
T 2qhx_A           44 PTVPVALVTGAAKRLGRSIAEGLHAEGY-AVCLHYHRSAAEANALSATLNARRPNSAITVQAD  105 (328)
T ss_dssp             -CCCEEEETTCSSHHHHHHHHHHHHTTC-EEEEEESSCHHHHHHHHHHHHHHSTTCEEEEECC
T ss_pred             cCCCEEEEECCCCHHHHHHHHHHHHCCC-EEEEEcCCCHHHHHHHHHHHHhhcCCeEEEEEee
Confidence            4568999999999999999999999995 899999 76422110  111   13467888888

>1gz6_A Estradiol 17 beta-dehydrogenase 4; 17BETA-HSD4, MFE-2, beta-oxidation, peroxisome, SDR, steroid biosynthesis, oxidoreductase, NADP; HET: NAI; 2.38A {Rattus norvegicus} SCOP: c.2.1.2 PDB: 1zbq_A*

Probab=97.02  E-value=0.00053  Score=63.85  Aligned_cols=37  Identities=41%  Similarity=0.592  Sum_probs=33.2

Q ss_pred             cccCCeEEEEcCCChhHHHHHHHHHHcCCceEEEEecC
Q 017760            8 GIEGKTFLVTGGLGHVGSALCLELVRRGAYQVRAFDLR   45 (366)
Q Consensus         8 ~~~~~~VlITGgtGfiG~~L~~~L~~~g~~~V~~~dr~   45 (366)
                      .+++++++||||+|.||+++++.|.++|+ +|++.|+.
T Consensus         6 ~l~gk~~lVTGas~GIG~~~a~~La~~Ga-~Vv~~~~~   42 (319)
T 1gz6_A            6 RFDGRVVLVTGAGGGLGRAYALAFAERGA-LVVVNDLG   42 (319)
T ss_dssp             CCTTCEEEETTTTSHHHHHHHHHHHHTTC-EEEEECCC
T ss_pred             CCCCCEEEEeCCCcHHHHHHHHHHHHCCC-EEEEEcCC
Confidence            35678999999999999999999999995 89998764

>1zmo_A Halohydrin dehalogenase; haloalcohol dehalogenase, short- chain dehydrogenase/reductase family, lyase; 2.00A {Arthrobacter SP}

Probab=96.95  E-value=0.0005  Score=61.16  Aligned_cols=35  Identities=23%  Similarity=0.125  Sum_probs=31.1

Q ss_pred             CCeEEEEcCCChhHHHHHHHHHHcCCceEEEE-e--cCC
Q 017760           11 GKTFLVTGGLGHVGSALCLELVRRGAYQVRAF-D--LRT   46 (366)
Q Consensus        11 ~~~VlITGgtGfiG~~L~~~L~~~g~~~V~~~-d--r~~   46 (366)
                      +++++||||+|.||+++++.|.++|+ +|+++ +  |+.
T Consensus         1 ~k~vlVTGas~gIG~~ia~~l~~~G~-~V~~~~~~~r~~   38 (244)
T 1zmo_A            1 MVIALVTHARHFAGPAAVEALTQDGY-TVVCHDASFADA   38 (244)
T ss_dssp             -CEEEESSTTSTTHHHHHHHHHHTTC-EEEECCGGGGSH
T ss_pred             CCEEEEECCCChHHHHHHHHHHHCCC-EEEEecCCcCCH
Confidence            46899999999999999999999995 89999 5  764

>2hmt_A YUAA protein; RCK, KTN, KTR, KTRA, ktrab, membrane protein, ION transporter, symporter, transport protein; HET: NAI; 2.20A {Bacillus subtilis} SCOP: c.2.1.9 PDB: 2hms_A* 2hmu_A* 2hmv_A* 2hmw_A* 1lsu_A*

Probab=96.92  E-value=0.00055  Score=55.06  Aligned_cols=36  Identities=39%  Similarity=0.586  Sum_probs=30.6

Q ss_pred             ccCCeEEEEcCCChhHHHHHHHHHHcCCceEEEEecCC
Q 017760            9 IEGKTFLVTGGLGHVGSALCLELVRRGAYQVRAFDLRT   46 (366)
Q Consensus         9 ~~~~~VlITGgtGfiG~~L~~~L~~~g~~~V~~~dr~~   46 (366)
                      +++++|+|+|+ |.+|+.+++.|.+.|. +|+++|+++
T Consensus         4 ~~~~~v~I~G~-G~iG~~~a~~l~~~g~-~v~~~d~~~   39 (144)
T 2hmt_A            4 IKNKQFAVIGL-GRFGGSIVKELHRMGH-EVLAVDINE   39 (144)
T ss_dssp             --CCSEEEECC-SHHHHHHHHHHHHTTC-CCEEEESCH
T ss_pred             CcCCcEEEECC-CHHHHHHHHHHHHCCC-EEEEEeCCH
Confidence            34678999998 9999999999999994 899998864

>2z5l_A Tylkr1, tylactone synthase starter module and modules 1 & 2; short-chain dehydrogenase/reductase, rossman fold; 1.95A {Streptomyces fradiae}

Probab=96.87  E-value=0.0011  Score=65.89  Aligned_cols=56  Identities=25%  Similarity=0.244  Sum_probs=41.3

Q ss_pred             cCCeEEEEcCCChhHHHHHHHHHHcCCceEEEEecCCCCcc-c----cccc--CCCeEEEEcc
Q 017760           10 EGKTFLVTGGLGHVGSALCLELVRRGAYQVRAFDLRTNSPW-S----HLLI--NHGVHCIQGL   65 (366)
Q Consensus        10 ~~~~VlITGgtGfiG~~L~~~L~~~g~~~V~~~dr~~~~~~-~----~~~~--~~~v~~i~gD   65 (366)
                      ++++|+||||+|+||.+++++|.++|+.+|++++|+.+... .    ..+.  ..++.++.+|
T Consensus       258 ~~~~vLITGgtGgIG~~lA~~La~~G~~~vvl~~R~~~~~~~~~~l~~~l~~~g~~v~~~~~D  320 (511)
T 2z5l_A          258 PSGTVLITGGMGAIGRRLARRLAAEGAERLVLTSRRGPEAPGAAELAEELRGHGCEVVHAACD  320 (511)
T ss_dssp             CCSEEEEETTTSHHHHHHHHHHHHTTCSEEEEEESSGGGSTTHHHHHHHHHTTTCEEEEEECC
T ss_pred             CCCEEEEECCCCHHHHHHHHHHHhCCCcEEEEEecCCcccHHHHHHHHHHHhcCCEEEEEEeC
Confidence            46789999999999999999999999646899988764211 1    1111  2357777887

>1jtv_A 17 beta-hydroxysteroid dehydrogenase type 1; steroid hormones, alternative binding mode, oxidoreductase; HET: TES; 1.54A {Homo sapiens} SCOP: c.2.1.2 PDB: 1dht_A* 1equ_A* 1bhs_A* 1i5r_A* 1qyv_A* 1qyw_A* 1qyx_A* 3dey_X* 3dhe_A* 3hb4_X* 3hb5_X* 3klp_X* 3km0_A* 1iol_A* 1fds_A* 1fdt_A* 3klm_X* 1fdw_A* 1fdu_A* 1fdv_A* ...

Probab=96.86  E-value=0.00054  Score=63.94  Aligned_cols=54  Identities=15%  Similarity=0.040  Sum_probs=40.4

Q ss_pred             CCeEEEEcCCChhHHHHHHHHHHcCCceEEEEecCCCCccc-cc-c--------cCCCeEEEEcc
Q 017760           11 GKTFLVTGGLGHVGSALCLELVRRGAYQVRAFDLRTNSPWS-HL-L--------INHGVHCIQGL   65 (366)
Q Consensus        11 ~~~VlITGgtGfiG~~L~~~L~~~g~~~V~~~dr~~~~~~~-~~-~--------~~~~v~~i~gD   65 (366)
                      +++|+||||+|+||+++++.|.++|+ +|+.++++...... .. .        ...++.++.+|
T Consensus         2 ~k~vlVTGas~GIG~ala~~L~~~G~-~v~~v~r~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~D   65 (327)
T 1jtv_A            2 RTVVLITGCSSGIGLHLAVRLASDPS-QSFKVYATLRDLKTQGRLWEAARALACPPGSLETLQLD   65 (327)
T ss_dssp             CEEEEESCCSSHHHHHHHHHHHTCTT-CCEEEEEEESCGGGTHHHHHHHHHTTCCTTSEEEEECC
T ss_pred             CCEEEEECCCCHHHHHHHHHHHHCCC-ceEEEEeecCcHHHHHHHHHHhhhccCCCCceEEEEec
Confidence            46899999999999999999999995 78888776433211 10 0        12468888999

>1id1_A Putative potassium channel protein; RCK domain, E.coli potassium channel, BK channel, rossmann fold, membrane protein; 2.40A {Escherichia coli} SCOP: c.2.1.9

Probab=96.79  E-value=0.00074  Score=55.52  Aligned_cols=36  Identities=22%  Similarity=0.281  Sum_probs=31.1

Q ss_pred             ccCCeEEEEcCCChhHHHHHHHHHHcCCceEEEEecCC
Q 017760            9 IEGKTFLVTGGLGHVGSALCLELVRRGAYQVRAFDLRT   46 (366)
Q Consensus         9 ~~~~~VlITGgtGfiG~~L~~~L~~~g~~~V~~~dr~~   46 (366)
                      |..++|+|+|+ |.+|+++++.|.+.| ++|+++|+++
T Consensus         1 ~~~~~vlI~G~-G~vG~~la~~L~~~g-~~V~vid~~~   36 (153)
T 1id1_A            1 HRKDHFIVCGH-SILAINTILQLNQRG-QNVTVISNLP   36 (153)
T ss_dssp             CCCSCEEEECC-SHHHHHHHHHHHHTT-CCEEEEECCC
T ss_pred             CCCCcEEEECC-CHHHHHHHHHHHHCC-CCEEEEECCC
Confidence            34568999985 999999999999999 5899999864

>2g1u_A Hypothetical protein TM1088A; structural genomics, joint center for structural genomics, J protein structure initiative, PSI-2; HET: AMP; 1.50A {Thermotoga maritima} PDB: 3l4b_A*

Probab=96.78  E-value=0.0027  Score=52.25  Aligned_cols=38  Identities=21%  Similarity=0.254  Sum_probs=32.2

Q ss_pred             cccCCeEEEEcCCChhHHHHHHHHHHcCCceEEEEecCCC
Q 017760            8 GIEGKTFLVTGGLGHVGSALCLELVRRGAYQVRAFDLRTN   47 (366)
Q Consensus         8 ~~~~~~VlITGgtGfiG~~L~~~L~~~g~~~V~~~dr~~~   47 (366)
                      ...+++|+|+|+ |.+|..+++.|.+.|. +|+++|+++.
T Consensus        16 ~~~~~~v~IiG~-G~iG~~la~~L~~~g~-~V~vid~~~~   53 (155)
T 2g1u_A           16 KQKSKYIVIFGC-GRLGSLIANLASSSGH-SVVVVDKNEY   53 (155)
T ss_dssp             -CCCCEEEEECC-SHHHHHHHHHHHHTTC-EEEEEESCGG
T ss_pred             ccCCCcEEEECC-CHHHHHHHHHHHhCCC-eEEEEECCHH
Confidence            345689999975 9999999999999995 8999998753

>1d7o_A Enoyl-[acyl-carrier protein] reductase (NADH) PRE; triclosan, enoyl reductase, oxidoreductase; HET: NAD TCL; 1.90A {Brassica napus} SCOP: c.2.1.2 PDB: 1eno_A* 1enp_A* 1cwu_A*

Probab=96.74  E-value=0.0016  Score=59.52  Aligned_cols=36  Identities=22%  Similarity=0.259  Sum_probs=32.5

Q ss_pred             ccCCeEEEEcCC--ChhHHHHHHHHHHcCCceEEEEecC
Q 017760            9 IEGKTFLVTGGL--GHVGSALCLELVRRGAYQVRAFDLR   45 (366)
Q Consensus         9 ~~~~~VlITGgt--GfiG~~L~~~L~~~g~~~V~~~dr~   45 (366)
                      +++++++||||+  |.||+++++.|.+.|+ +|++++|+
T Consensus         6 l~~k~~lVTGas~~~GIG~aia~~la~~G~-~V~~~~r~   43 (297)
T 1d7o_A            6 LRGKRAFIAGIADDNGYGWAVAKSLAAAGA-EILVGTWV   43 (297)
T ss_dssp             CTTCEEEEECCSSSSSHHHHHHHHHHHTTC-EEEEEEEH
T ss_pred             cCCCEEEEECCCCCCChHHHHHHHHHHCCC-eEEEeecc
Confidence            566899999999  9999999999999995 89999864

>2gk4_A Conserved hypothetical protein; alpha-beta-alpha sandwich, flavoprotein, structural genomics protein structure initiative; 1.83A {Streptococcus pneumoniae}

Probab=96.73  E-value=0.0018  Score=57.17  Aligned_cols=52  Identities=19%  Similarity=0.199  Sum_probs=39.0

Q ss_pred             cCCeEEEEcC----------------CChhHHHHHHHHHHcCCceEEEEecCCCCcccccccCCCeEEEEcc
Q 017760           10 EGKTFLVTGG----------------LGHVGSALCLELVRRGAYQVRAFDLRTNSPWSHLLINHGVHCIQGL   65 (366)
Q Consensus        10 ~~~~VlITGg----------------tGfiG~~L~~~L~~~g~~~V~~~dr~~~~~~~~~~~~~~v~~i~gD   65 (366)
                      .+++|+||||                ||.+|.++++.+.++|+ +|+.++++.....   ..+.+++.+..+
T Consensus         2 ~gk~vlVTgG~T~E~IDpVR~ItN~SSG~mG~aiA~~~~~~Ga-~V~lv~~~~~~~~---~~~~~~~~~~v~   69 (232)
T 2gk4_A            2 NAMKILVTSGGTSEAIDSVRSITNHSTGHLGKIITETLLSAGY-EVCLITTKRALKP---EPHPNLSIREIT   69 (232)
T ss_dssp             -CCEEEEECSBCEEESSSSEEEEECCCCHHHHHHHHHHHHTTC-EEEEEECTTSCCC---CCCTTEEEEECC
T ss_pred             CCCEEEEeCCCcccccCceeeccCCCCCHHHHHHHHHHHHCCC-EEEEEeCCccccc---cCCCCeEEEEHh
Confidence            4689999999                99999999999999996 8999988753211   112355665554

>3mje_A AMPHB; rossmann fold, oxidoreductase; HET: NDP; 1.36A {Streptomyces nodosus} PDB: 3mjc_A* 3mjs_A* 3mjv_A* 3mjt_A*

Probab=96.54  E-value=0.0026  Score=62.80  Aligned_cols=54  Identities=24%  Similarity=0.261  Sum_probs=41.3

Q ss_pred             CeEEEEcCCChhHHHHHHHHHHcCCceEEEEecCCCCcc-ccc----c--cCCCeEEEEcc
Q 017760           12 KTFLVTGGLGHVGSALCLELVRRGAYQVRAFDLRTNSPW-SHL----L--INHGVHCIQGL   65 (366)
Q Consensus        12 ~~VlITGgtGfiG~~L~~~L~~~g~~~V~~~dr~~~~~~-~~~----~--~~~~v~~i~gD   65 (366)
                      ++++||||+|.||.++++.|.++|..+|++++|+..... ...    +  ...++.++.+|
T Consensus       240 ~~vLITGgsgGIG~alA~~La~~Ga~~vvl~~R~~~~~~~~~~l~~~l~~~g~~v~~~~~D  300 (496)
T 3mje_A          240 GSVLVTGGTGGIGGRVARRLAEQGAAHLVLTSRRGADAPGAAELRAELEQLGVRVTIAACD  300 (496)
T ss_dssp             SEEEEETCSSHHHHHHHHHHHHTTCSEEEEEESSGGGSTTHHHHHHHHHHTTCEEEEEECC
T ss_pred             CEEEEECCCCchHHHHHHHHHHCCCcEEEEEeCCCCChHHHHHHHHHHHhcCCeEEEEEcc
Confidence            789999999999999999999999657888888743221 111    1  13568899999

>1lss_A TRK system potassium uptake protein TRKA homolog; KTN domain, NAD, RCK domain, potassium transport, potassium channel, KTRA; HET: NAD; 2.30A {Methanocaldococcus jannaschii} SCOP: c.2.1.9

Probab=96.51  E-value=0.003  Score=50.36  Aligned_cols=35  Identities=26%  Similarity=0.490  Sum_probs=29.8

Q ss_pred             cCCeEEEEcCCChhHHHHHHHHHHcCCceEEEEecCC
Q 017760           10 EGKTFLVTGGLGHVGSALCLELVRRGAYQVRAFDLRT   46 (366)
Q Consensus        10 ~~~~VlITGgtGfiG~~L~~~L~~~g~~~V~~~dr~~   46 (366)
                      .+|+|+|+|+ |++|+.+++.|.+.| ++|+++|+++
T Consensus         3 ~~m~i~IiG~-G~iG~~~a~~L~~~g-~~v~~~d~~~   37 (140)
T 1lss_A            3 HGMYIIIAGI-GRVGYTLAKSLSEKG-HDIVLIDIDK   37 (140)
T ss_dssp             --CEEEEECC-SHHHHHHHHHHHHTT-CEEEEEESCH
T ss_pred             CCCEEEEECC-CHHHHHHHHHHHhCC-CeEEEEECCH
Confidence            3478999976 999999999999999 5899999864

>1u7z_A Coenzyme A biosynthesis bifunctional protein coabc; ligase; HET: PMT; 2.30A {Escherichia coli} SCOP: c.72.3.1 PDB: 1u7w_A* 1u7u_A* 1u80_A*

Probab=96.49  E-value=0.0036  Score=55.09  Aligned_cols=37  Identities=27%  Similarity=0.432  Sum_probs=33.5

Q ss_pred             ccCCeEEEEcC----------------CChhHHHHHHHHHHcCCceEEEEecCC
Q 017760            9 IEGKTFLVTGG----------------LGHVGSALCLELVRRGAYQVRAFDLRT   46 (366)
Q Consensus         9 ~~~~~VlITGg----------------tGfiG~~L~~~L~~~g~~~V~~~dr~~   46 (366)
                      +.+++|+||||                ||.+|.++++.|.++|+ +|+.++++.
T Consensus         6 l~gk~vlVTgG~T~E~iDpVR~itN~SSg~iG~aiA~~~~~~Ga-~V~l~~~~~   58 (226)
T 1u7z_A            6 LKHLNIMITAGPTREPLDPVRYISDHSSGKMGFAIAAAAARRGA-NVTLVSGPV   58 (226)
T ss_dssp             TTTCEEEEEESBCEEESSSSEEEEECCCSHHHHHHHHHHHHTTC-EEEEEECSC
T ss_pred             CCCCEEEEECCCCCcccCceeeccCCCccHHHHHHHHHHHHCCC-EEEEEECCc
Confidence            57899999999                79999999999999996 899988765

>2o2s_A Enoyl-acyl carrier reductase; enoyl reductase, triclosan, rossmann fold, oxidoreductase; HET: NAD TCL; 2.60A {Toxoplasma gondii} PDB: 2o50_A 3nj8_A*

Probab=96.43  E-value=0.0033  Score=58.12  Aligned_cols=36  Identities=28%  Similarity=0.286  Sum_probs=32.4

Q ss_pred             ccCCeEEEEcC--CChhHHHHHHHHHHcCCceEEEEecC
Q 017760            9 IEGKTFLVTGG--LGHVGSALCLELVRRGAYQVRAFDLR   45 (366)
Q Consensus         9 ~~~~~VlITGg--tGfiG~~L~~~L~~~g~~~V~~~dr~   45 (366)
                      +++++++||||  +|.||.++++.|.+.|+ +|++++|+
T Consensus         7 l~gk~~lVTGa~~s~GIG~aia~~la~~G~-~Vv~~~r~   44 (315)
T 2o2s_A            7 LRGQTAFVAGVADSHGYGWAIAKHLASAGA-RVALGTWP   44 (315)
T ss_dssp             CTTCEEEEECCSSSSSHHHHHHHHHHTTTC-EEEEEECH
T ss_pred             CCCCEEEEeCCCCCCChHHHHHHHHHHCCC-EEEEEecc
Confidence            45689999999  89999999999999995 89999864

>2ptg_A Enoyl-acyl carrier reductase; apicomplexa, enoyl (acyl-carrier-P reductase, oxidoreductase; 2.60A {Eimeria tenella}

Probab=96.42  E-value=0.003  Score=58.42  Aligned_cols=36  Identities=33%  Similarity=0.364  Sum_probs=32.3

Q ss_pred             ccCCeEEEEcC--CChhHHHHHHHHHHcCCceEEEEecC
Q 017760            9 IEGKTFLVTGG--LGHVGSALCLELVRRGAYQVRAFDLR   45 (366)
Q Consensus         9 ~~~~~VlITGg--tGfiG~~L~~~L~~~g~~~V~~~dr~   45 (366)
                      +++++++||||  +|.||+++++.|++.|+ +|++++|+
T Consensus         7 l~~k~~lVTGa~~s~GIG~aia~~la~~G~-~Vv~~~r~   44 (319)
T 2ptg_A            7 LRGKTAFVAGVADSNGYGWAICKLLRAAGA-RVLVGTWP   44 (319)
T ss_dssp             CTTCEEEEECCCCTTSHHHHHHHHHHHTTC-EEEEEECH
T ss_pred             cCCCEEEEeCCCCCCcHHHHHHHHHHHCCC-EEEEEecc
Confidence            45688999999  89999999999999995 89999864

>1lu9_A Methylene tetrahydromethanopterin dehydrogenase; alpha/beta twisted open sheet structure, oxidoreductase; 1.90A {Methylobacterium extorquens} SCOP: c.2.1.7 c.58.1.4 PDB: 1lua_A*

Probab=96.39  E-value=0.0038  Score=57.00  Aligned_cols=37  Identities=30%  Similarity=0.383  Sum_probs=33.6

Q ss_pred             ccCCeEEEEcCCChhHHHHHHHHHHcCCceEEEEecCC
Q 017760            9 IEGKTFLVTGGLGHVGSALCLELVRRGAYQVRAFDLRT   46 (366)
Q Consensus         9 ~~~~~VlITGgtGfiG~~L~~~L~~~g~~~V~~~dr~~   46 (366)
                      +++++++||||+|.+|++++..|.+.|. +|++++|+.
T Consensus       117 l~gk~vlVtGaaGGiG~aia~~L~~~G~-~V~i~~R~~  153 (287)
T 1lu9_A          117 VKGKKAVVLAGTGPVGMRSAALLAGEGA-EVVLCGRKL  153 (287)
T ss_dssp             CTTCEEEEETCSSHHHHHHHHHHHHTTC-EEEEEESSH
T ss_pred             CCCCEEEEECCCcHHHHHHHHHHHHCcC-EEEEEECCH
Confidence            4578999999999999999999999996 799999874

>1ff9_A Saccharopine reductase; lysine biosynthesis, alpha-aminoadipate pathway, dehydrogenase, oxidoreductase; 2.00A {Magnaporthe grisea} SCOP: c.2.1.3 d.81.1.2 PDB: 1e5l_A* 1e5q_A

Probab=96.07  E-value=0.0045  Score=60.39  Aligned_cols=53  Identities=21%  Similarity=0.086  Sum_probs=38.6

Q ss_pred             ccCCeEEEEcCCChhHHHHHHHHHHcCCceEEEEecCCCCccccccc--CCCeEEEEcc
Q 017760            9 IEGKTFLVTGGLGHVGSALCLELVRRGAYQVRAFDLRTNSPWSHLLI--NHGVHCIQGL   65 (366)
Q Consensus         9 ~~~~~VlITGgtGfiG~~L~~~L~~~g~~~V~~~dr~~~~~~~~~~~--~~~v~~i~gD   65 (366)
                      |++++|+||| +|++|+++++.|.+.| ++|++.+|+....  ..+.  ..++..+++|
T Consensus         1 M~~k~VlViG-aG~iG~~ia~~L~~~G-~~V~v~~R~~~~a--~~la~~~~~~~~~~~D   55 (450)
T 1ff9_A            1 MATKSVLMLG-SGFVTRPTLDVLTDSG-IKVTVACRTLESA--KKLSAGVQHSTPISLD   55 (450)
T ss_dssp             -CCCEEEEEC-CSTTHHHHHHHHHTTT-CEEEEEESSHHHH--HHTTTTCTTEEEEECC
T ss_pred             CCCCEEEEEC-CCHHHHHHHHHHHhCc-CEEEEEECCHHHH--HHHHHhcCCceEEEee
Confidence            3568999997 8999999999999999 4899999875322  1111  1246677777

>1smk_A Malate dehydrogenase, glyoxysomal; tricarboxylic cycle, glyoxysome, NAD, glyoxylate bypass, oxidoreductase; HET: CIT; 2.50A {Citrullus lanatus} PDB: 1sev_A

Probab=96.06  E-value=0.0047  Score=57.56  Aligned_cols=37  Identities=16%  Similarity=0.311  Sum_probs=32.0

Q ss_pred             CCeEEEEcCCChhHHHHHHHHHHcCC-ceEEEEecCCC
Q 017760           11 GKTFLVTGGLGHVGSALCLELVRRGA-YQVRAFDLRTN   47 (366)
Q Consensus        11 ~~~VlITGgtGfiG~~L~~~L~~~g~-~~V~~~dr~~~   47 (366)
                      ++||+||||+|++|+.++..|.+.|. ++|+++|+++.
T Consensus         8 ~mKI~ViGAaG~VG~~la~~L~~~g~~~ev~l~Di~~~   45 (326)
T 1smk_A            8 GFKVAILGAAGGIGQPLAMLMKMNPLVSVLHLYDVVNA   45 (326)
T ss_dssp             CEEEEEETTTSTTHHHHHHHHHHCTTEEEEEEEESSSH
T ss_pred             CCEEEEECCCChHHHHHHHHHHhCCCCCEEEEEeCCCc
Confidence            46899999999999999999998872 48999998764

>1b8p_A Protein (malate dehydrogenase); oxidoreductase; 1.90A {Aquaspirillum arcticum} SCOP: c.2.1.5 d.162.1.1 PDB: 1b8u_A* 1b8v_A* 3d5t_A

Probab=96.06  E-value=0.0041  Score=58.06  Aligned_cols=35  Identities=14%  Similarity=0.266  Sum_probs=31.0

Q ss_pred             CCeEEEEcCCChhHHHHHHHHHHcCC------ceEEEEecC
Q 017760           11 GKTFLVTGGLGHVGSALCLELVRRGA------YQVRAFDLR   45 (366)
Q Consensus        11 ~~~VlITGgtGfiG~~L~~~L~~~g~------~~V~~~dr~   45 (366)
                      .+||+||||+||+|++++..|...|.      ++|+++|++
T Consensus         5 ~~KI~ViGaaG~VG~~l~~~L~~~~~~~~~~~~ev~l~Di~   45 (329)
T 1b8p_A            5 PMRVAVTGAAGQICYSLLFRIANGDMLGKDQPVILQLLEIP   45 (329)
T ss_dssp             CEEEEESSTTSHHHHHHHHHHHTTTTTCTTCCEEEEEECCS
T ss_pred             CCEEEEECCCChHHHHHHHHHHhCCCcCCCCCCEEEEEcCC
Confidence            46899999999999999999998874      379999987

>3qp9_A Type I polyketide synthase pikaii; rossmann fold, ketoreductase, epimerization, oxidoreductase; 1.88A {Streptomyces venezuelae}

Probab=96.04  E-value=0.012  Score=58.63  Aligned_cols=38  Identities=24%  Similarity=0.207  Sum_probs=31.6

Q ss_pred             cCCeEEEEcCCChhHHHHHHHHHHcCCceEEEE-ecCCC
Q 017760           10 EGKTFLVTGGLGHVGSALCLELVRRGAYQVRAF-DLRTN   47 (366)
Q Consensus        10 ~~~~VlITGgtGfiG~~L~~~L~~~g~~~V~~~-dr~~~   47 (366)
                      ++++++||||+|.||.++++.|.++|...|+++ +|+..
T Consensus       250 ~~~~vLITGgsgGIG~~lA~~La~~G~~~vvl~~~R~~~  288 (525)
T 3qp9_A          250 ADGTVLVTGAEEPAAAEAARRLARDGAGHLLLHTTPSGS  288 (525)
T ss_dssp             TTSEEEESSTTSHHHHHHHHHHHHHTCCEEEEEECCCC-
T ss_pred             CCCEEEEECCCCcHHHHHHHHHHHcCCCEEEEEeCCCCC
Confidence            467899999999999999999999996446666 77753

>1jay_A Coenzyme F420H2:NADP+ oxidoreductase (FNO); rossman fold, structural genomics; HET: NAP F42; 1.65A {Archaeoglobus fulgidus} SCOP: c.2.1.6 PDB: 1jax_A*

Probab=95.91  E-value=0.0081  Score=51.86  Aligned_cols=34  Identities=26%  Similarity=0.414  Sum_probs=31.0

Q ss_pred             CeEEEEcCCChhHHHHHHHHHHcCCceEEEEecCC
Q 017760           12 KTFLVTGGLGHVGSALCLELVRRGAYQVRAFDLRT   46 (366)
Q Consensus        12 ~~VlITGgtGfiG~~L~~~L~~~g~~~V~~~dr~~   46 (366)
                      |+|+|+||+|.+|+++++.|.+.| ++|++++|++
T Consensus         1 m~i~iiGa~G~~G~~ia~~l~~~g-~~V~~~~r~~   34 (212)
T 1jay_A            1 MRVALLGGTGNLGKGLALRLATLG-HEIVVGSRRE   34 (212)
T ss_dssp             CEEEEETTTSHHHHHHHHHHHTTT-CEEEEEESSH
T ss_pred             CeEEEEcCCCHHHHHHHHHHHHCC-CEEEEEeCCH
Confidence            479999999999999999999999 5999999874

>3fwz_A Inner membrane protein YBAL; TRKA-N domain, E.coli, structural genomics, PSI-2, Pro structure initiative; HET: MSE AMP; 1.79A {Escherichia coli k-12}

Probab=95.90  E-value=0.0051  Score=49.65  Aligned_cols=50  Identities=24%  Similarity=0.313  Sum_probs=36.4

Q ss_pred             CeEEEEcCCChhHHHHHHHHHHcCCceEEEEecCCCCcccccccCCCeEEEEcc
Q 017760           12 KTFLVTGGLGHVGSALCLELVRRGAYQVRAFDLRTNSPWSHLLINHGVHCIQGL   65 (366)
Q Consensus        12 ~~VlITGgtGfiG~~L~~~L~~~g~~~V~~~dr~~~~~~~~~~~~~~v~~i~gD   65 (366)
                      ++|+|.|+ |.+|+.+++.|.+.| ++|+++|+++...  ..+...++..+.||
T Consensus         8 ~~viIiG~-G~~G~~la~~L~~~g-~~v~vid~~~~~~--~~~~~~g~~~i~gd   57 (140)
T 3fwz_A            8 NHALLVGY-GRVGSLLGEKLLASD-IPLVVIETSRTRV--DELRERGVRAVLGN   57 (140)
T ss_dssp             SCEEEECC-SHHHHHHHHHHHHTT-CCEEEEESCHHHH--HHHHHTTCEEEESC
T ss_pred             CCEEEECc-CHHHHHHHHHHHHCC-CCEEEEECCHHHH--HHHHHcCCCEEECC
Confidence            57999975 999999999999999 5999999876321  22222455555555

>3oml_A GH14720P, peroxisomal multifunctional enzyme type 2, CG3415; rossmann fold, hot-DOG fold, hydratase 2 motif, peroxisomes, oxidoreductase; 2.15A {Drosophila melanogaster}

Probab=95.78  E-value=0.0062  Score=61.80  Aligned_cols=36  Identities=33%  Similarity=0.484  Sum_probs=31.4

Q ss_pred             cccCCeEEEEcCCChhHHHHHHHHHHcCCceEEEEec
Q 017760            8 GIEGKTFLVTGGLGHVGSALCLELVRRGAYQVRAFDL   44 (366)
Q Consensus         8 ~~~~~~VlITGgtGfiG~~L~~~L~~~g~~~V~~~dr   44 (366)
                      .+++++++||||+|.||+++++.|.++|+ +|++.|+
T Consensus        16 ~l~gk~~lVTGas~GIG~aiA~~La~~Ga-~Vv~~~r   51 (613)
T 3oml_A           16 RYDGRVAVVTGAGAGLGREYALLFAERGA-KVVVNDL   51 (613)
T ss_dssp             CCTTCEEEETTTTSHHHHHHHHHHHHTTC-EEEEC--
T ss_pred             CCCCCEEEEeCCCcHHHHHHHHHHHHCCC-EEEEEeC
Confidence            45678999999999999999999999995 8999988

>1hye_A L-lactate/malate dehydrogenase; nucleotide binding domain, oxidoreductase; HET: NAP; 1.90A {Methanocaldococcus jannaschii} SCOP: c.2.1.5 d.162.1.1 PDB: 1hyg_A*

Probab=95.36  E-value=0.016  Score=53.68  Aligned_cols=33  Identities=24%  Similarity=0.272  Sum_probs=29.1

Q ss_pred             CeEEEEcCCChhHHHHHHHHHHcCC-ceEEEEec
Q 017760           12 KTFLVTGGLGHVGSALCLELVRRGA-YQVRAFDL   44 (366)
Q Consensus        12 ~~VlITGgtGfiG~~L~~~L~~~g~-~~V~~~dr   44 (366)
                      |||+||||+|++|++++..|+..|. .++.++|+
T Consensus         1 mKI~V~GaaG~vG~~l~~~L~~~~~~~el~L~Di   34 (313)
T 1hye_A            1 MKVTIIGASGRVGSATALLLAKEPFMKDLVLIGR   34 (313)
T ss_dssp             CEEEEETTTSHHHHHHHHHHHTCTTCCEEEEEEC
T ss_pred             CEEEEECCCChhHHHHHHHHHhCCCCCEEEEEcC
Confidence            4899999999999999999998873 36888998

>3lt0_A Enoyl-ACP reductase; triclosan, triclosan variant, oxidoredu P.falciparum; HET: NAD FT1; 1.96A {Plasmodium falciparum} SCOP: c.2.1.2 PDB: 1v35_A* 3lsy_A* 1uh5_A* 3lt1_A* 3lt2_A* 3lt4_A* 3am4_A* 3am3_A* 3am5_A* 2o2y_A* 2oos_A* 2ol4_A* 2op0_A* 2op1_A* 1vrw_A* 1zsn_A* 1zw1_A* 1zxb_A* 1zxl_A* 2foi_A* ...

Probab=95.29  E-value=0.029  Score=51.99  Aligned_cols=35  Identities=14%  Similarity=0.080  Sum_probs=30.0

Q ss_pred             CCeEEEEcCCC--hhHHHHHHHHHHcCCceEEEEecCC
Q 017760           11 GKTFLVTGGLG--HVGSALCLELVRRGAYQVRAFDLRT   46 (366)
Q Consensus        11 ~~~VlITGgtG--fiG~~L~~~L~~~g~~~V~~~dr~~   46 (366)
                      +++++||||++  -||.++++.|.++|+ +|++.++++
T Consensus         2 ~k~~lITGas~~~GIG~aiA~~la~~G~-~Vv~~~~~~   38 (329)
T 3lt0_A            2 EDICFIAGIGDTNGYGWGIAKELSKRNV-KIIFGIWPP   38 (329)
T ss_dssp             CCEEEEECCSSSSSHHHHHHHHHHHTTC-EEEEEECHH
T ss_pred             CcEEEEECCCCCCchHHHHHHHHHHCCC-EEEEEecCc
Confidence            47899999875  899999999999995 899776553

>2pff_A Fatty acid synthase subunit alpha, 3-oxoacyl-[acyl-carrier-PR; fatty acid synthase, acyl-carrier-protein, beta-ketoacyl RED beta-ketoacyl synthase, dehydratase; 4.00A {Saccharomyces cerevisiae}

Probab=95.28  E-value=0.023  Score=62.29  Aligned_cols=56  Identities=16%  Similarity=0.129  Sum_probs=40.8

Q ss_pred             ccCCeEEEEcCCCh-hHHHHHHHHHHcCCceEEEEe-cCCCCccc--ccc----c--CCCeEEEEcc
Q 017760            9 IEGKTFLVTGGLGH-VGSALCLELVRRGAYQVRAFD-LRTNSPWS--HLL----I--NHGVHCIQGL   65 (366)
Q Consensus         9 ~~~~~VlITGgtGf-iG~~L~~~L~~~g~~~V~~~d-r~~~~~~~--~~~----~--~~~v~~i~gD   65 (366)
                      +++++++||||+|. ||.++++.|++.|+ +|++++ ++......  ..+    .  ...+.++.+|
T Consensus       474 L~GKvALVTGASgGGIGrAIAr~LA~~GA-~VVL~~~R~~e~lee~a~eL~ael~a~Ga~V~vV~~D  539 (1688)
T 2pff_A          474 FKDKYVLITGAGKGSIGAEVLQGLLQGGA-KVVVTTSRFSKQVTDYYQSIYAKYGAKGSTLIVVPFN  539 (1688)
T ss_dssp             CCSCCEEECSCSSSSTHHHHHHHHHHHTC-EEEEEESSCSTTTTTHHHHTTTTTCCTTCEEEEEECC
T ss_pred             cCCCEEEEECCChHHHHHHHHHHHHHCcC-EEEEEeCCCHHHHHHHHHHHHHHhhcCCCeEEEEEeC
Confidence            55688999999998 99999999999996 899985 44322111  111    0  2357888999

>3s8m_A Enoyl-ACP reductase; rossmann fold, oxidoreductase, NADH binding, fatty acid SYNT enoyl-ACP; 1.60A {Xanthomonas oryzae PV}

Probab=95.27  E-value=0.036  Score=53.26  Aligned_cols=37  Identities=22%  Similarity=0.138  Sum_probs=33.6

Q ss_pred             CCeEEEEcCCChhHHHHHHHHHH-cCCceEEEEecCCCC
Q 017760           11 GKTFLVTGGLGHVGSALCLELVR-RGAYQVRAFDLRTNS   48 (366)
Q Consensus        11 ~~~VlITGgtGfiG~~L~~~L~~-~g~~~V~~~dr~~~~   48 (366)
                      ++++|||||++-||.++++.|.+ .|+ +|++.+++...
T Consensus        61 gKvaLVTGASsGIG~AiA~~LA~~~GA-~Vv~~~r~~~~   98 (422)
T 3s8m_A           61 PKKVLVIGASSGYGLASRITAAFGFGA-DTLGVFFEKPG   98 (422)
T ss_dssp             CSEEEEESCSSHHHHHHHHHHHHHHCC-EEEEEECCCCC
T ss_pred             CCEEEEECCChHHHHHHHHHHHHhCCC-EEEEEeCCchh
Confidence            67899999999999999999999 996 89999987654

>3c85_A Putative glutathione-regulated potassium-efflux S protein KEFB; TRKA domain; HET: AMP; 1.90A {Vibrio parahaemolyticus rimd 2210633}

Probab=95.12  E-value=0.01  Score=49.99  Aligned_cols=53  Identities=23%  Similarity=0.350  Sum_probs=37.7

Q ss_pred             ccCCeEEEEcCCChhHHHHHHHHHHc-CCceEEEEecCCCCcccccccCCCeEEEEcc
Q 017760            9 IEGKTFLVTGGLGHVGSALCLELVRR-GAYQVRAFDLRTNSPWSHLLINHGVHCIQGL   65 (366)
Q Consensus         9 ~~~~~VlITGgtGfiG~~L~~~L~~~-g~~~V~~~dr~~~~~~~~~~~~~~v~~i~gD   65 (366)
                      ..+++|+|+| .|.+|..+++.|.+. | ++|+++|+++...  ..+...+++.+.+|
T Consensus        37 ~~~~~v~IiG-~G~~G~~~a~~L~~~~g-~~V~vid~~~~~~--~~~~~~g~~~~~gd   90 (183)
T 3c85_A           37 PGHAQVLILG-MGRIGTGAYDELRARYG-KISLGIEIREEAA--QQHRSEGRNVISGD   90 (183)
T ss_dssp             CTTCSEEEEC-CSHHHHHHHHHHHHHHC-SCEEEEESCHHHH--HHHHHTTCCEEECC
T ss_pred             CCCCcEEEEC-CCHHHHHHHHHHHhccC-CeEEEEECCHHHH--HHHHHCCCCEEEcC
Confidence            3456899997 699999999999999 9 5899999875321  22222345555554

>3fi9_A Malate dehydrogenase; structural genomics, oxidoreductase, PSI-2, protein structur initiative; 1.90A {Porphyromonas gingivalis}

Probab=95.07  E-value=0.024  Score=53.14  Aligned_cols=40  Identities=13%  Similarity=0.184  Sum_probs=34.6

Q ss_pred             ccccCCeEEEEcCCChhHHHHHHHHHHcCC-ceEEEEecCC
Q 017760            7 EGIEGKTFLVTGGLGHVGSALCLELVRRGA-YQVRAFDLRT   46 (366)
Q Consensus         7 ~~~~~~~VlITGgtGfiG~~L~~~L~~~g~-~~V~~~dr~~   46 (366)
                      +.|+++||.|+|++|++|+.++..++..|. ++|+++|++.
T Consensus         4 ~~~~~~KV~ViGaaG~VG~~~a~~l~~~g~~~evvLiDi~~   44 (343)
T 3fi9_A            4 SYLTEEKLTIVGAAGMIGSNMAQTAAMMRLTPNLCLYDPFA   44 (343)
T ss_dssp             CCSCSSEEEEETTTSHHHHHHHHHHHHTTCCSCEEEECSCH
T ss_pred             cccCCCEEEEECCCChHHHHHHHHHHhcCCCCEEEEEeCCc
Confidence            456678999999999999999999998883 5899999864

>3zu3_A Putative reductase YPO4104/Y4119/YP_4011; oxidoreductase, fatty acid biosynthesis II, short-chain dehydrogenase reductase superfamily; HET: NAI; 1.80A {Yersinia pestis} PDB: 3zu4_A* 3zu5_A* 3zu2_A*

Probab=95.05  E-value=0.04  Score=52.56  Aligned_cols=38  Identities=21%  Similarity=0.126  Sum_probs=33.7

Q ss_pred             cCCeEEEEcCCChhHHHHHHHHHH-cCCceEEEEecCCCC
Q 017760           10 EGKTFLVTGGLGHVGSALCLELVR-RGAYQVRAFDLRTNS   48 (366)
Q Consensus        10 ~~~~VlITGgtGfiG~~L~~~L~~-~g~~~V~~~dr~~~~   48 (366)
                      .+++++||||++-+|.++++.|.+ .|+ +|++++++...
T Consensus        46 ~gKvaLVTGas~GIG~AiA~~LA~g~GA-~Vv~~~~~~~~   84 (405)
T 3zu3_A           46 GPKRVLVIGASTGYGLAARITAAFGCGA-DTLGVFFERPG   84 (405)
T ss_dssp             CCSEEEEESCSSHHHHHHHHHHHHHHCC-EEEEEECCCCC
T ss_pred             CCCEEEEeCcchHHHHHHHHHHHHhcCC-EEEEEeCCchh
Confidence            367899999999999999999999 996 89999887654

>1pqw_A Polyketide synthase; rossmann fold, dimer, structural genomics, PSI, protein STRU initiative; 2.66A {Mycobacterium tuberculosis} SCOP: c.2.1.1

Probab=94.91  E-value=0.024  Score=48.23  Aligned_cols=36  Identities=22%  Similarity=0.206  Sum_probs=32.4

Q ss_pred             cCCeEEEEcCCChhHHHHHHHHHHcCCceEEEEecCC
Q 017760           10 EGKTFLVTGGLGHVGSALCLELVRRGAYQVRAFDLRT   46 (366)
Q Consensus        10 ~~~~VlITGgtGfiG~~L~~~L~~~g~~~V~~~dr~~   46 (366)
                      ++++|+||||+|-+|..+++.+...|. +|+++++++
T Consensus        38 ~g~~vlV~Ga~ggiG~~~~~~~~~~G~-~V~~~~~~~   73 (198)
T 1pqw_A           38 PGERVLIHSATGGVGMAAVSIAKMIGA-RIYTTAGSD   73 (198)
T ss_dssp             TTCEEEETTTTSHHHHHHHHHHHHHTC-EEEEEESSH
T ss_pred             CCCEEEEeeCCChHHHHHHHHHHHcCC-EEEEEeCCH
Confidence            468999999999999999999999996 899998764

>1o6z_A MDH, malate dehydrogenase; halophilic, ION-binding, protein-solvent interaction, oxidoreductase; HET: NAD; 1.95A {Haloarcula marismortui} SCOP: c.2.1.5 d.162.1.1 PDB: 1gt2_A* 2x0r_A* 2j5k_A 2j5q_A 2j5r_A 1d3a_A 1hlp_A* 2hlp_A

Probab=94.88  E-value=0.025  Score=52.06  Aligned_cols=33  Identities=27%  Similarity=0.358  Sum_probs=28.9

Q ss_pred             CeEEEEcCCChhHHHHHHHHHHcCC-ceEEEEec
Q 017760           12 KTFLVTGGLGHVGSALCLELVRRGA-YQVRAFDL   44 (366)
Q Consensus        12 ~~VlITGgtGfiG~~L~~~L~~~g~-~~V~~~dr   44 (366)
                      |||+||||+|++|+.++..|+..|. .++.++|+
T Consensus         1 mKI~IiGAaG~vG~~l~~~L~~~~~~~el~L~Di   34 (303)
T 1o6z_A            1 TKVSVVGAAGTVGAAAGYNIALRDIADEVVFVDI   34 (303)
T ss_dssp             CEEEEETTTSHHHHHHHHHHHHTTCCSEEEEECC
T ss_pred             CEEEEECCCChHHHHHHHHHHhCCCCCEEEEEcC
Confidence            5899999999999999999998773 36888988

>3c24_A Putative oxidoreductase; YP_511008.1, structural genomics, center for structural genomics, JCSG, protein structure INI PSI-2; HET: MSE; 1.62A {Jannaschia SP}

Probab=94.88  E-value=0.032  Score=50.64  Aligned_cols=35  Identities=17%  Similarity=0.326  Sum_probs=31.8

Q ss_pred             CCeEEEEcCCChhHHHHHHHHHHcCCceEEEEecCC
Q 017760           11 GKTFLVTGGLGHVGSALCLELVRRGAYQVRAFDLRT   46 (366)
Q Consensus        11 ~~~VlITGgtGfiG~~L~~~L~~~g~~~V~~~dr~~   46 (366)
                      |++|.|.|++|.+|+.+++.|.+.| ++|++.|+++
T Consensus        11 mm~I~iIG~tG~mG~~la~~l~~~g-~~V~~~~r~~   45 (286)
T 3c24_A           11 PKTVAILGAGGKMGARITRKIHDSA-HHLAAIEIAP   45 (286)
T ss_dssp             CCEEEEETTTSHHHHHHHHHHHHSS-SEEEEECCSH
T ss_pred             CCEEEEECCCCHHHHHHHHHHHhCC-CEEEEEECCH
Confidence            4799999999999999999999999 5999998874

>2uv9_A Fatty acid synthase alpha subunits; fungal, dehydratase, enoyl reductase, ketoacyl synthase, ketoacyl reductase; 3.1A {Thermomyces lanuginosus} PDB: 2uvb_A*

Probab=94.87  E-value=0.023  Score=63.67  Aligned_cols=56  Identities=20%  Similarity=0.163  Sum_probs=41.7

Q ss_pred             ccCCeEEEEcCCCh-hHHHHHHHHHHcCCceEEEEecCCCCccc-------cccc--CCCeEEEEcc
Q 017760            9 IEGKTFLVTGGLGH-VGSALCLELVRRGAYQVRAFDLRTNSPWS-------HLLI--NHGVHCIQGL   65 (366)
Q Consensus         9 ~~~~~VlITGgtGf-iG~~L~~~L~~~g~~~V~~~dr~~~~~~~-------~~~~--~~~v~~i~gD   65 (366)
                      +++++++||||+|. ||.++++.|++.|+ +|++++++......       ..+.  ...+.++.+|
T Consensus       650 L~gKvaLVTGASgGgIG~aIAr~LA~~GA-~VVl~~~R~~~~l~~~a~eL~~el~~~G~~v~~v~~D  715 (1878)
T 2uv9_A          650 FQGKHALMTGAGAGSIGAEVLQGLLSGGA-KVIVTTSRFSRQVTEYYQGIYARCGARGSQLVVVPFN  715 (1878)
T ss_dssp             CTTCEEEEESCCTTSHHHHHHHHHHHTTC-EEEEEESSCCHHHHHHHHHHHHHHCCTTCEEEEEECC
T ss_pred             CCCCEEEEECCCCcHHHHHHHHHHHHCCC-EEEEEecCChHHHHHHHHHHHHHhhccCCeEEEEEcC
Confidence            55689999999999 99999999999996 89998755432210       0111  3467888999

>3l4b_C TRKA K+ channel protien TM1088B; potassium channel, ring-gating complex, structural GEN PSI-2-2, protein structure initiative; HET: AMP; 3.45A {Thermotoga maritima}

Probab=94.77  E-value=0.019  Score=49.88  Aligned_cols=50  Identities=16%  Similarity=0.201  Sum_probs=37.6

Q ss_pred             CeEEEEcCCChhHHHHHHHHHHcCCceEEEEecCCCCccccccc-CCCeEEEEcc
Q 017760           12 KTFLVTGGLGHVGSALCLELVRRGAYQVRAFDLRTNSPWSHLLI-NHGVHCIQGL   65 (366)
Q Consensus        12 ~~VlITGgtGfiG~~L~~~L~~~g~~~V~~~dr~~~~~~~~~~~-~~~v~~i~gD   65 (366)
                      |+|+|+|+ |.+|+++++.|.+.| ++|+++|+++...  ..+. ..++.++.||
T Consensus         1 M~iiIiG~-G~~G~~la~~L~~~g-~~v~vid~~~~~~--~~l~~~~~~~~i~gd   51 (218)
T 3l4b_C            1 MKVIIIGG-ETTAYYLARSMLSRK-YGVVIINKDRELC--EEFAKKLKATIIHGD   51 (218)
T ss_dssp             CCEEEECC-HHHHHHHHHHHHHTT-CCEEEEESCHHHH--HHHHHHSSSEEEESC
T ss_pred             CEEEEECC-CHHHHHHHHHHHhCC-CeEEEEECCHHHH--HHHHHHcCCeEEEcC
Confidence            57999985 999999999999999 5899999875322  1111 2356777777

>2raf_A Putative dinucleotide-binding oxidoreductase; NP_786167.1, NADP oxidoreductase coenzyme F420-dependent, structural genomics; HET: MSE NAP; 1.60A {Lactobacillus plantarum WCFS1}

Probab=94.73  E-value=0.035  Score=48.00  Aligned_cols=43  Identities=21%  Similarity=0.315  Sum_probs=30.8

Q ss_pred             ccccccccCCeEEEEcCCChhHHHHHHHHHHcCCceEEEEecCCC
Q 017760            3 LSENEGIEGKTFLVTGGLGHVGSALCLELVRRGAYQVRAFDLRTN   47 (366)
Q Consensus         3 ~~~~~~~~~~~VlITGgtGfiG~~L~~~L~~~g~~~V~~~dr~~~   47 (366)
                      +-++....+++|.|.| +|.+|+.++..|.+.| ++|++.|+++.
T Consensus        11 ~~~~~~~~~~~I~iiG-~G~mG~~la~~l~~~g-~~V~~~~~~~~   53 (209)
T 2raf_A           11 HHENLYFQGMEITIFG-KGNMGQAIGHNFEIAG-HEVTYYGSKDQ   53 (209)
T ss_dssp             ---------CEEEEEC-CSHHHHHHHHHHHHTT-CEEEEECTTCC
T ss_pred             cccccccCCCEEEEEC-CCHHHHHHHHHHHHCC-CEEEEEcCCHH
Confidence            3455556778999997 8999999999999999 59999988754

>2nqt_A N-acetyl-gamma-glutamyl-phosphate reductase; apoprotein, dimer, rossmann fold, structural genomics, PSI, protein structure initiative; 1.58A {Mycobacterium tuberculosis} PDB: 2i3a_A* 2i3g_A

Probab=94.64  E-value=0.028  Score=52.79  Aligned_cols=37  Identities=16%  Similarity=0.235  Sum_probs=30.8

Q ss_pred             ccCCeEEEEcCCChhHHHHHHHHHHcC-----CceEEEEecC
Q 017760            9 IEGKTFLVTGGLGHVGSALCLELVRRG-----AYQVRAFDLR   45 (366)
Q Consensus         9 ~~~~~VlITGgtGfiG~~L~~~L~~~g-----~~~V~~~dr~   45 (366)
                      |+|++|.|.||||++|+.|++.|.+++     ..+|+.+..+
T Consensus         7 M~m~kVaIvGATG~vG~~llr~L~~~~~~~~~~~ei~~l~s~   48 (352)
T 2nqt_A            7 ANATKVAVAGASGYAGGEILRLLLGHPAYADGRLRIGALTAA   48 (352)
T ss_dssp             CSCEEEEEETTTSHHHHHHHHHHHTCHHHHTTSEEEEEEEES
T ss_pred             ccCCEEEEECCCCHHHHHHHHHHHcCCCCCCccEEEEEEECC
Confidence            345799999999999999999999877     4578887543

>4eue_A Putative reductase CA_C0462; TER, biofuel, synthetic biology, catalytic mechan substrate specificity, oxidoreductase; HET: NAI; 2.00A {Clostridium acetobutylicum} PDB: 4euf_A* 4euh_A*

Probab=94.53  E-value=0.054  Score=52.11  Aligned_cols=39  Identities=18%  Similarity=0.208  Sum_probs=34.0

Q ss_pred             ccCCeEEEEcCCChhHHH--HHHHHHHcCCceEEEEecCCCC
Q 017760            9 IEGKTFLVTGGLGHVGSA--LCLELVRRGAYQVRAFDLRTNS   48 (366)
Q Consensus         9 ~~~~~VlITGgtGfiG~~--L~~~L~~~g~~~V~~~dr~~~~   48 (366)
                      ..+++++||||++-||.+  +++.|.+.|+ +|++++++...
T Consensus        58 ~~gK~aLVTGassGIG~A~aia~ala~~Ga-~Vi~~~r~~~~   98 (418)
T 4eue_A           58 RGPKKVLIVGASSGFGLATRISVAFGGPEA-HTIGVSYETGA   98 (418)
T ss_dssp             CCCSEEEEESCSSHHHHHHHHHHHHSSSCC-EEEEEECCCCC
T ss_pred             CCCCEEEEECCCcHHHHHHHHHHHHHhCCC-EEEEEecCcch
Confidence            346889999999999999  9999999996 89999987654

>2pv7_A T-protein [includes: chorismate mutase (EC 5.4.99 and prephenate dehydrogenase (EC...; 1574749, chorismate mutase type II; HET: MSE TYR NAD; 2.00A {Haemophilus influenzae} SCOP: a.100.1.12 c.2.1.6

Probab=94.42  E-value=0.042  Score=50.24  Aligned_cols=36  Identities=22%  Similarity=0.432  Sum_probs=32.1

Q ss_pred             CCeEEEEcCCChhHHHHHHHHHHcCCceEEEEecCCC
Q 017760           11 GKTFLVTGGLGHVGSALCLELVRRGAYQVRAFDLRTN   47 (366)
Q Consensus        11 ~~~VlITGgtGfiG~~L~~~L~~~g~~~V~~~dr~~~   47 (366)
                      +++|.|.||+|.+|..++..|.+.| ++|++.|+++.
T Consensus        21 ~~~I~iIGg~G~mG~~la~~l~~~G-~~V~~~~~~~~   56 (298)
T 2pv7_A           21 IHKIVIVGGYGKLGGLFARYLRASG-YPISILDREDW   56 (298)
T ss_dssp             CCCEEEETTTSHHHHHHHHHHHTTT-CCEEEECTTCG
T ss_pred             CCEEEEEcCCCHHHHHHHHHHHhCC-CeEEEEECCcc
Confidence            4689999999999999999999999 58999987753

>2uv8_A Fatty acid synthase subunit alpha (FAS2); fatty acid biosynthesis, malonyl/palmitoyl transferase, phosphopantetheine, transferase; HET: GVL FMN; 3.10A {Saccharomyces cerevisiae} PDB: 2vkz_A* 3hmj_A*

Probab=94.33  E-value=0.039  Score=61.98  Aligned_cols=56  Identities=18%  Similarity=0.190  Sum_probs=41.3

Q ss_pred             ccCCeEEEEcCCCh-hHHHHHHHHHHcCCceEEEEecCCCCccc---ccc------cCCCeEEEEcc
Q 017760            9 IEGKTFLVTGGLGH-VGSALCLELVRRGAYQVRAFDLRTNSPWS---HLL------INHGVHCIQGL   65 (366)
Q Consensus         9 ~~~~~VlITGgtGf-iG~~L~~~L~~~g~~~V~~~dr~~~~~~~---~~~------~~~~v~~i~gD   65 (366)
                      +++++++||||+|. ||.++++.|++.|+ +|++++.+......   ..+      ....+.++.+|
T Consensus       673 l~gKvaLVTGASsGgIG~aIA~~La~~GA-~Vvl~~~R~~~~l~~~~~eL~~~~~~~g~~v~~v~~D  738 (1887)
T 2uv8_A          673 FKDKYVLITGAGKGSIGAEVLQGLLQGGA-KVVVTTSRFSKQVTDYYQSIYAKYGAKGSTLIVVPFN  738 (1887)
T ss_dssp             CTTCEEEEESCCSSSHHHHHHHHHHHTTC-EEEEEESSCCHHHHHHHHHHHHHHCCTTCEEEEEECC
T ss_pred             CCCCEEEEECCCCcHHHHHHHHHHHHCCC-EEEEEecCCHHHHHHHHHHHHHHhhcCCCeEEEEEec
Confidence            56789999999998 99999999999996 89998544322110   111      13467888999

>3abi_A Putative uncharacterized protein PH1688; L-lysine dehydrogenase, oxidoreductase; HET: NAD; 2.44A {Pyrococcus horikoshii}

Probab=94.30  E-value=0.037  Score=52.21  Aligned_cols=54  Identities=15%  Similarity=0.192  Sum_probs=35.4

Q ss_pred             cccccCCeEEEEcCCChhHHHHHHHHHHcCCceEEEEecCCCCcccccccCCCeEEEEcc
Q 017760            6 NEGIEGKTFLVTGGLGHVGSALCLELVRRGAYQVRAFDLRTNSPWSHLLINHGVHCIQGL   65 (366)
Q Consensus         6 ~~~~~~~~VlITGgtGfiG~~L~~~L~~~g~~~V~~~dr~~~~~~~~~~~~~~v~~i~gD   65 (366)
                      ++..+.|||+|.|+ |++|+.+++.|.+.  ++|.+.|++....  .. ..+.+..++.|
T Consensus        11 ~~~g~~mkilvlGa-G~vG~~~~~~L~~~--~~v~~~~~~~~~~--~~-~~~~~~~~~~d   64 (365)
T 3abi_A           11 HIEGRHMKVLILGA-GNIGRAIAWDLKDE--FDVYIGDVNNENL--EK-VKEFATPLKVD   64 (365)
T ss_dssp             -----CCEEEEECC-SHHHHHHHHHHTTT--SEEEEEESCHHHH--HH-HTTTSEEEECC
T ss_pred             cccCCccEEEEECC-CHHHHHHHHHHhcC--CCeEEEEcCHHHH--HH-HhccCCcEEEe
Confidence            33345578999988 99999999999764  4899998875321  11 12445666666

>1mld_A Malate dehydrogenase; oxidoreductase(NAD(A)-CHOH(D)); HET: CIT; 1.83A {Sus scrofa} SCOP: c.2.1.5 d.162.1.1 PDB: 2dfd_A*

Probab=94.26  E-value=0.046  Score=50.49  Aligned_cols=35  Identities=23%  Similarity=0.360  Sum_probs=31.3

Q ss_pred             CeEEEEcCCChhHHHHHHHHHHcCC-ceEEEEecCC
Q 017760           12 KTFLVTGGLGHVGSALCLELVRRGA-YQVRAFDLRT   46 (366)
Q Consensus        12 ~~VlITGgtGfiG~~L~~~L~~~g~-~~V~~~dr~~   46 (366)
                      |||.|+||+|++|+.++..|.+.|. ++|+++|+++
T Consensus         1 mKI~IiGa~G~VG~~la~~L~~~~~~~ev~L~Di~~   36 (314)
T 1mld_A            1 AKVAVLGASGGIGQPLSLLLKNSPLVSRLTLYDIAH   36 (314)
T ss_dssp             CEEEEETTTSTTHHHHHHHHHTCTTCSEEEEEESSS
T ss_pred             CEEEEECCCChHHHHHHHHHHhCCCCcEEEEEeCCc
Confidence            4899999999999999999998872 5899999986

>2et6_A (3R)-hydroxyacyl-COA dehydrogenase; MFE-2, beta-oxidation, peroxisome, SDR, oxido; 2.22A {Candida tropicalis}

Probab=94.02  E-value=0.04  Score=55.71  Aligned_cols=37  Identities=24%  Similarity=0.386  Sum_probs=32.8

Q ss_pred             ccCCeEEEEcCCChhHHHHHHHHHHcCCceEEEEecCC
Q 017760            9 IEGKTFLVTGGLGHVGSALCLELVRRGAYQVRAFDLRT   46 (366)
Q Consensus         9 ~~~~~VlITGgtGfiG~~L~~~L~~~g~~~V~~~dr~~   46 (366)
                      +++++++||||++-||.++++.|.++|+ +|++.|++.
T Consensus       320 l~gkvalVTGas~GIG~a~A~~la~~Ga-~Vv~~~~~~  356 (604)
T 2et6_A          320 LKDKVVLITGAGAGLGKEYAKWFAKYGA-KVVVNDFKD  356 (604)
T ss_dssp             CTTCEEEESSCSSHHHHHHHHHHHHTTC-EEEEECSSC
T ss_pred             cCCCeEEEECcchHHHHHHHHHHHHCCC-EEEEEeCcc
Confidence            4568899999999999999999999996 899998743

>2et6_A (3R)-hydroxyacyl-COA dehydrogenase; MFE-2, beta-oxidation, peroxisome, SDR, oxido; 2.22A {Candida tropicalis}

Probab=94.01  E-value=0.045  Score=55.33  Aligned_cols=37  Identities=32%  Similarity=0.487  Sum_probs=32.3

Q ss_pred             ccCCeEEEEcCCChhHHHHHHHHHHcCCceEEEEecCC
Q 017760            9 IEGKTFLVTGGLGHVGSALCLELVRRGAYQVRAFDLRT   46 (366)
Q Consensus         9 ~~~~~VlITGgtGfiG~~L~~~L~~~g~~~V~~~dr~~   46 (366)
                      +++++++||||++-||+++++.|.++|+ +|++.|++.
T Consensus         6 l~gkvalVTGas~GIG~a~A~~la~~Ga-~Vv~~~~~~   42 (604)
T 2et6_A            6 FKDKVVIITGAGGGLGKYYSLEFAKLGA-KVVVNDLGG   42 (604)
T ss_dssp             CTTCEEEETTTTSHHHHHHHHHHHHTTC-EEEEECC--
T ss_pred             CCCCEEEEeCCCcHHHHHHHHHHHHcCC-EEEEEeCCc
Confidence            5678999999999999999999999996 899998764

>4huj_A Uncharacterized protein; PSI-biology, nysgrc, structural genomics, NEW YORK structura genomics research consortium, dinucleotide-binding; 1.77A {Sinorhizobium meliloti}

Probab=93.84  E-value=0.036  Score=48.28  Aligned_cols=38  Identities=18%  Similarity=0.142  Sum_probs=32.2

Q ss_pred             cccCCeEEEEcCCChhHHHHHHHHHHcCCceEEE-EecCCC
Q 017760            8 GIEGKTFLVTGGLGHVGSALCLELVRRGAYQVRA-FDLRTN   47 (366)
Q Consensus         8 ~~~~~~VlITGgtGfiG~~L~~~L~~~g~~~V~~-~dr~~~   47 (366)
                      .|+|++|.|.| +|.+|++++..|.+.| ++|++ .+|++.
T Consensus        20 ~m~mmkI~IIG-~G~mG~~la~~l~~~g-~~V~~v~~r~~~   58 (220)
T 4huj_A           20 FQSMTTYAIIG-AGAIGSALAERFTAAQ-IPAIIANSRGPA   58 (220)
T ss_dssp             GGGSCCEEEEE-CHHHHHHHHHHHHHTT-CCEEEECTTCGG
T ss_pred             hhcCCEEEEEC-CCHHHHHHHHHHHhCC-CEEEEEECCCHH
Confidence            35678999997 8999999999999999 48998 777643

>1xyg_A Putative N-acetyl-gamma-glutamyl-phosphate reduct; structural genomics, protein structure initiative, CENT eukaryotic structural genomics; 2.19A {Arabidopsis thaliana} SCOP: c.2.1.3 d.81.1.1 PDB: 2q49_A 2cvo_A

Probab=93.83  E-value=0.06  Score=50.74  Aligned_cols=37  Identities=16%  Similarity=0.189  Sum_probs=29.8

Q ss_pred             ccCCeEEEEcCCChhHHHHHHHHHHcCCceEEEEecC
Q 017760            9 IEGKTFLVTGGLGHVGSALCLELVRRGAYQVRAFDLR   45 (366)
Q Consensus         9 ~~~~~VlITGgtGfiG~~L~~~L~~~g~~~V~~~dr~   45 (366)
                      |++++|.|.||+|++|+.+++.|.+....+++++..+
T Consensus        14 M~~~kV~IiGAtG~iG~~llr~L~~~p~~elvai~~~   50 (359)
T 1xyg_A           14 EKDIRIGLLGASGYTGAEIVRLLANHPHFQVTLMTAD   50 (359)
T ss_dssp             -CCEEEEEECCSSHHHHHHHHHHHTCSSEEEEEEBCS
T ss_pred             ccCcEEEEECcCCHHHHHHHHHHHcCCCcEEEEEeCc
Confidence            4557899999999999999999998764477777544

>2ozp_A N-acetyl-gamma-glutamyl-phosphate reductase; amino acid biosynthesis, structural genomics, riken structur genomics/proteomics initiative; 2.01A {Thermus thermophilus}

Probab=93.72  E-value=0.063  Score=50.27  Aligned_cols=37  Identities=19%  Similarity=0.233  Sum_probs=29.0

Q ss_pred             ccCCeEEEEcCCChhHHHHHHHHHHcCCceEEEEecC
Q 017760            9 IEGKTFLVTGGLGHVGSALCLELVRRGAYQVRAFDLR   45 (366)
Q Consensus         9 ~~~~~VlITGgtGfiG~~L~~~L~~~g~~~V~~~dr~   45 (366)
                      |+|++|.|.|++|++|+.+++.|.+....+++.+..+
T Consensus         2 ~~~~kV~IiGAtG~iG~~llr~L~~~p~~elv~v~s~   38 (345)
T 2ozp_A            2 TGKKTLSIVGASGYAGGEFLRLALSHPYLEVKQVTSR   38 (345)
T ss_dssp             --CEEEEEETTTSHHHHHHHHHHHTCTTEEEEEEBCS
T ss_pred             CCCCEEEEECCCCHHHHHHHHHHHcCCCcEEEEEECc
Confidence            3457999999999999999999998763477776554

>3slk_A Polyketide synthase extender module 2; rossmann fold, NADPH, oxidoreductase; HET: NDP; 3.00A {Saccharopolyspora spinosa}

Probab=93.67  E-value=0.069  Score=55.74  Aligned_cols=56  Identities=27%  Similarity=0.294  Sum_probs=42.4

Q ss_pred             cCCeEEEEcCCChhHHHHHHHHH-HcCCceEEEEecCCCCccc-----ccc--cCCCeEEEEcc
Q 017760           10 EGKTFLVTGGLGHVGSALCLELV-RRGAYQVRAFDLRTNSPWS-----HLL--INHGVHCIQGL   65 (366)
Q Consensus        10 ~~~~VlITGgtGfiG~~L~~~L~-~~g~~~V~~~dr~~~~~~~-----~~~--~~~~v~~i~gD   65 (366)
                      ++++++||||+|-+|.++++.|. ++|+.+|+.++|+.+....     ..+  ...++.++++|
T Consensus       529 ~~~~~lItGg~~GlG~aiA~~la~~~Ga~~vvl~~R~~~~~~~~~~~~~~l~~~G~~v~~~~~D  592 (795)
T 3slk_A          529 AAGTVLVTGGTGALGAEVARHLVIERGVRNLVLVSRRGPAASGAAELVAQLTAYGAEVSLQACD  592 (795)
T ss_dssp             TTSEEEEETTTSHHHHHHHHHHHHTSSCCEEEEEESSGGGSTTHHHHHHHHHHTTCEEEEEECC
T ss_pred             cccceeeccCCCCcHHHHHHHHHHHcCCcEEEEeccCccchHHHHHHHHHHHhcCCcEEEEEee
Confidence            46789999999999999999999 7897569999988432211     111  13568889999

>2vns_A Metalloreductase steap3; metal-binding, transmembrane, rossmann fold, transport, cell cycle, transferrin, flavoprotein, alternative splicing; HET: CIT; 2.0A {Homo sapiens} PDB: 2vq3_A*

Probab=93.57  E-value=0.069  Score=46.28  Aligned_cols=36  Identities=22%  Similarity=0.306  Sum_probs=30.4

Q ss_pred             cCCeEEEEcCCChhHHHHHHHHHHcCCceEEEEecCCC
Q 017760           10 EGKTFLVTGGLGHVGSALCLELVRRGAYQVRAFDLRTN   47 (366)
Q Consensus        10 ~~~~VlITGgtGfiG~~L~~~L~~~g~~~V~~~dr~~~   47 (366)
                      .+++|.|+| +|.+|+.+++.|.+.| ++|++.+|++.
T Consensus        27 ~~~~I~iiG-~G~~G~~la~~l~~~g-~~V~~~~r~~~   62 (215)
T 2vns_A           27 EAPKVGILG-SGDFARSLATRLVGSG-FKVVVGSRNPK   62 (215)
T ss_dssp             --CCEEEEC-CSHHHHHHHHHHHHTT-CCEEEEESSHH
T ss_pred             CCCEEEEEc-cCHHHHHHHHHHHHCC-CEEEEEeCCHH
Confidence            457899997 8999999999999999 58999998753

>2aef_A Calcium-gated potassium channel MTHK; rossmann fold, helix-turn-helix, Ca2+ binding, flexible interface; 1.70A {Methanothermobacterthermautotrophicus} PDB: 2aej_A 2aem_A 3rbx_A 2ogu_A 2fy8_A 3kxd_A

Probab=93.54  E-value=0.028  Score=49.31  Aligned_cols=49  Identities=12%  Similarity=0.089  Sum_probs=37.9

Q ss_pred             CCeEEEEcCCChhHHHHHHHHHHcCCceEEEEecCCCCcccccccCCCeEEEEcc
Q 017760           11 GKTFLVTGGLGHVGSALCLELVRRGAYQVRAFDLRTNSPWSHLLINHGVHCIQGL   65 (366)
Q Consensus        11 ~~~VlITGgtGfiG~~L~~~L~~~g~~~V~~~dr~~~~~~~~~~~~~~v~~i~gD   65 (366)
                      .++|+|+|+ |.+|+.+++.|.+.| + |+++|+++...  .... .++.++.||
T Consensus         9 ~~~viI~G~-G~~G~~la~~L~~~g-~-v~vid~~~~~~--~~~~-~~~~~i~gd   57 (234)
T 2aef_A            9 SRHVVICGW-SESTLECLRELRGSE-V-FVLAEDENVRK--KVLR-SGANFVHGD   57 (234)
T ss_dssp             -CEEEEESC-CHHHHHHHHHSTTSE-E-EEEESCGGGHH--HHHH-TTCEEEESC
T ss_pred             CCEEEEECC-ChHHHHHHHHHHhCC-e-EEEEECCHHHH--HHHh-cCCeEEEcC
Confidence            468999986 999999999999999 6 99998775321  2223 568888888

>4e21_A 6-phosphogluconate dehydrogenase (decarboxylating; structural genomics, PSI-biology, NEW YORK structural genomi research consortium; 2.30A {Geobacter metallireducens}

Probab=93.35  E-value=0.079  Score=49.86  Aligned_cols=40  Identities=25%  Similarity=0.417  Sum_probs=31.5

Q ss_pred             cccccCCeEEEEcCCChhHHHHHHHHHHcCCceEEEEecCCC
Q 017760            6 NEGIEGKTFLVTGGLGHVGSALCLELVRRGAYQVRAFDLRTN   47 (366)
Q Consensus         6 ~~~~~~~~VlITGgtGfiG~~L~~~L~~~g~~~V~~~dr~~~   47 (366)
                      +.++++|+|.|.| .|.+|..++..|.+.| ++|++.||++.
T Consensus        17 ~~Mm~~mkIgiIG-lG~mG~~~A~~L~~~G-~~V~v~dr~~~   56 (358)
T 4e21_A           17 NLYFQSMQIGMIG-LGRMGADMVRRLRKGG-HECVVYDLNVN   56 (358)
T ss_dssp             -----CCEEEEEC-CSHHHHHHHHHHHHTT-CEEEEECSCHH
T ss_pred             hhhhcCCEEEEEC-chHHHHHHHHHHHhCC-CEEEEEeCCHH
Confidence            3355678999995 8999999999999999 59999998753

>1ys4_A Aspartate-semialdehyde dehydrogenase; oxidoreductase, asadh; HET: NAP; 2.29A {Methanocaldococcus jannaschii}

Probab=93.30  E-value=0.075  Score=49.93  Aligned_cols=34  Identities=21%  Similarity=0.271  Sum_probs=28.7

Q ss_pred             CCeEEEEcCCChhHHHHHHHHHHcCCceEEEEec
Q 017760           11 GKTFLVTGGLGHVGSALCLELVRRGAYQVRAFDL   44 (366)
Q Consensus        11 ~~~VlITGgtGfiG~~L~~~L~~~g~~~V~~~dr   44 (366)
                      +++|.|.||+|++|+.+++.|.+....+|+++.+
T Consensus         8 ~~kV~IiGAtG~iG~~llr~L~~~p~~ev~~i~~   41 (354)
T 1ys4_A            8 KIKVGVLGATGSVGQRFVQLLADHPMFELTALAA   41 (354)
T ss_dssp             CEEEEEETTTSHHHHHHHHHHTTCSSEEEEEEEE
T ss_pred             cceEEEECcCCHHHHHHHHHHhcCCCCEEEEEEc
Confidence            4689999999999999999998876447887754

>2axq_A Saccharopine dehydrogenase; rossmann fold variant, saccharopine reductase fold (domain II), alpha/beta protein; 1.70A {Saccharomyces cerevisiae}

Probab=93.21  E-value=0.044  Score=53.55  Aligned_cols=38  Identities=21%  Similarity=0.194  Sum_probs=31.0

Q ss_pred             cccCCeEEEEcCCChhHHHHHHHHHHc-CCceEEEEecCCC
Q 017760            8 GIEGKTFLVTGGLGHVGSALCLELVRR-GAYQVRAFDLRTN   47 (366)
Q Consensus         8 ~~~~~~VlITGgtGfiG~~L~~~L~~~-g~~~V~~~dr~~~   47 (366)
                      ..++++|+|+|+ |.+|+++++.|.+. | .+|++.+|+..
T Consensus        20 ~l~~k~VlIiGA-GgiG~aia~~L~~~~g-~~V~v~~R~~~   58 (467)
T 2axq_A           20 RHMGKNVLLLGS-GFVAQPVIDTLAANDD-INVTVACRTLA   58 (467)
T ss_dssp             ---CEEEEEECC-STTHHHHHHHHHTSTT-EEEEEEESSHH
T ss_pred             CCCCCEEEEECC-hHHHHHHHHHHHhCCC-CeEEEEECCHH
Confidence            345678999997 99999999999998 6 58999998753

>2ew2_A 2-dehydropantoate 2-reductase, putative; alpha-structure, alpha-beta structure, structural genomics, protein structure initiative; HET: MSE; 2.00A {Enterococcus faecalis}

Probab=93.11  E-value=0.089  Score=47.89  Aligned_cols=34  Identities=26%  Similarity=0.391  Sum_probs=29.8

Q ss_pred             CCeEEEEcCCChhHHHHHHHHHHcCCceEEEEecCC
Q 017760           11 GKTFLVTGGLGHVGSALCLELVRRGAYQVRAFDLRT   46 (366)
Q Consensus        11 ~~~VlITGgtGfiG~~L~~~L~~~g~~~V~~~dr~~   46 (366)
                      ||+|.|.| +|.+|+.++..|.+.| ++|+++||++
T Consensus         3 ~m~i~iiG-~G~~G~~~a~~l~~~g-~~V~~~~r~~   36 (316)
T 2ew2_A            3 AMKIAIAG-AGAMGSRLGIMLHQGG-NDVTLIDQWP   36 (316)
T ss_dssp             -CEEEEEC-CSHHHHHHHHHHHHTT-CEEEEECSCH
T ss_pred             CCeEEEEC-cCHHHHHHHHHHHhCC-CcEEEEECCH
Confidence            46899997 5999999999999999 5999999875

>1v3u_A Leukotriene B4 12- hydroxydehydrogenase/prostaglandin 15-keto reductase; rossmann fold, riken structural genomics/proteomics initiative, RSGI; 2.00A {Cavia porcellus} SCOP: b.35.1.2 c.2.1.1 PDB: 1v3t_A 1v3v_A* 2dm6_A* 1zsv_A 2y05_A*

Probab=93.09  E-value=0.11  Score=47.98  Aligned_cols=36  Identities=28%  Similarity=0.305  Sum_probs=32.6

Q ss_pred             cCCeEEEEcCCChhHHHHHHHHHHcCCceEEEEecCC
Q 017760           10 EGKTFLVTGGLGHVGSALCLELVRRGAYQVRAFDLRT   46 (366)
Q Consensus        10 ~~~~VlITGgtGfiG~~L~~~L~~~g~~~V~~~dr~~   46 (366)
                      .+++|+||||+|-+|..+++.+...|. +|+++++++
T Consensus       145 ~g~~vlV~Ga~ggiG~~~~~~~~~~G~-~V~~~~~~~  180 (333)
T 1v3u_A          145 GGETVLVSAAAGAVGSVVGQIAKLKGC-KVVGAAGSD  180 (333)
T ss_dssp             SSCEEEEESTTBHHHHHHHHHHHHTTC-EEEEEESSH
T ss_pred             CCCEEEEecCCCcHHHHHHHHHHHCCC-EEEEEeCCH
Confidence            468999999999999999999999996 899998764

>4ina_A Saccharopine dehydrogenase; structural genomics, PSI-biology, northeast structural genom consortium, NESG, oxidoreductas; 2.49A {Wolinella succinogenes}

Probab=93.08  E-value=0.087  Score=50.42  Aligned_cols=54  Identities=9%  Similarity=0.031  Sum_probs=38.2

Q ss_pred             CCeEEEEcCCChhHHHHHHHHHHcCC--ceEEEEecCCCCccc--cccc---CCCeEEEEcc
Q 017760           11 GKTFLVTGGLGHVGSALCLELVRRGA--YQVRAFDLRTNSPWS--HLLI---NHGVHCIQGL   65 (366)
Q Consensus        11 ~~~VlITGgtGfiG~~L~~~L~~~g~--~~V~~~dr~~~~~~~--~~~~---~~~v~~i~gD   65 (366)
                      |++|+|+|+ |++|+.+++.|.+.|.  .+|.+.+|+......  ..+.   ..++..+.+|
T Consensus         1 M~kVlIiGa-GgiG~~ia~~L~~~g~~~~~V~v~~r~~~~~~~la~~l~~~~~~~~~~~~~D   61 (405)
T 4ina_A            1 MAKVLQIGA-GGVGGVVAHKMAMNREVFSHITLASRTLSKCQEIAQSIKAKGYGEIDITTVD   61 (405)
T ss_dssp             -CEEEEECC-SHHHHHHHHHHHTCTTTCCEEEEEESCHHHHHHHHHHHHHTTCCCCEEEECC
T ss_pred             CCEEEEECC-CHHHHHHHHHHHhCCCCceEEEEEECCHHHHHHHHHHhhhhcCCceEEEEec
Confidence            468999998 9999999999999882  379999987543211  1111   1257777777

>1bg6_A N-(1-D-carboxylethyl)-L-norvaline dehydrogenase; L) stereospecific opine dehydrogenase, oxidoreductase; 1.80A {Arthrobacter SP} SCOP: a.100.1.5 c.2.1.6

Probab=93.07  E-value=0.092  Score=48.88  Aligned_cols=36  Identities=42%  Similarity=0.620  Sum_probs=30.2

Q ss_pred             ccCCeEEEEcCCChhHHHHHHHHHHcCCceEEEEecCC
Q 017760            9 IEGKTFLVTGGLGHVGSALCLELVRRGAYQVRAFDLRT   46 (366)
Q Consensus         9 ~~~~~VlITGgtGfiG~~L~~~L~~~g~~~V~~~dr~~   46 (366)
                      |++|+|.|.| +|.+|..++..|.+.| ++|+++|+++
T Consensus         2 m~~mki~iiG-~G~~G~~~a~~L~~~g-~~V~~~~r~~   37 (359)
T 1bg6_A            2 IESKTYAVLG-LGNGGHAFAAYLALKG-QSVLAWDIDA   37 (359)
T ss_dssp             --CCEEEEEC-CSHHHHHHHHHHHHTT-CEEEEECSCH
T ss_pred             CCcCeEEEEC-CCHHHHHHHHHHHhCC-CEEEEEeCCH
Confidence            4457999996 5999999999999999 5899998874

>1evy_A Glycerol-3-phosphate dehydrogenase; rossmann fold, oxidoreductase; HET: MYS; 1.75A {Leishmania mexicana} SCOP: a.100.1.6 c.2.1.6 PDB: 1evz_A* 1jdj_A* 1m66_A* 1m67_A* 1n1e_A* 1n1g_A*

Probab=93.04  E-value=0.057  Score=50.73  Aligned_cols=36  Identities=22%  Similarity=0.355  Sum_probs=30.6

Q ss_pred             ccCCeEEEEcCCChhHHHHHHHHHHcCCceEEEEecCC
Q 017760            9 IEGKTFLVTGGLGHVGSALCLELVRRGAYQVRAFDLRT   46 (366)
Q Consensus         9 ~~~~~VlITGgtGfiG~~L~~~L~~~g~~~V~~~dr~~   46 (366)
                      |+|++|.|.| +|.+|..++..|.+.| ++|++.+|++
T Consensus        13 m~M~kI~iIG-~G~mG~~la~~L~~~G-~~V~~~~r~~   48 (366)
T 1evy_A           13 LYLNKAVVFG-SGAFGTALAMVLSKKC-REVCVWHMNE   48 (366)
T ss_dssp             CCEEEEEEEC-CSHHHHHHHHHHTTTE-EEEEEECSCH
T ss_pred             hccCeEEEEC-CCHHHHHHHHHHHhCC-CEEEEEECCH
Confidence            4444899996 5999999999999999 6999998874

>2hcy_A Alcohol dehydrogenase 1; tetramer of asymmetric dimers, zinc coordination, intramolec disulfide bonds, oxidoreductase; HET: 8ID; 2.44A {Saccharomyces cerevisiae}

Probab=92.82  E-value=0.14  Score=47.69  Aligned_cols=37  Identities=22%  Similarity=0.229  Sum_probs=33.1

Q ss_pred             cCCeEEEEcCCChhHHHHHHHHHHcCCceEEEEecCCC
Q 017760           10 EGKTFLVTGGLGHVGSALCLELVRRGAYQVRAFDLRTN   47 (366)
Q Consensus        10 ~~~~VlITGgtGfiG~~L~~~L~~~g~~~V~~~dr~~~   47 (366)
                      .+++|+|+|++|-+|..+++.+...|. +|+++++++.
T Consensus       169 ~g~~vlV~Ga~ggiG~~~~~~a~~~Ga-~V~~~~~~~~  205 (347)
T 2hcy_A          169 AGHWVAISGAAGGLGSLAVQYAKAMGY-RVLGIDGGEG  205 (347)
T ss_dssp             TTCEEEEETTTSHHHHHHHHHHHHTTC-EEEEEECSTT
T ss_pred             CCCEEEEECCCchHHHHHHHHHHHCCC-cEEEEcCCHH
Confidence            468999999999999999999999996 8999998754

>2hjs_A USG-1 protein homolog; aspartate-semialdehyde dehydrogenase, probable hydrolase, PS aeruginosa, structurual genomics; 2.20A {Pseudomonas aeruginosa} SCOP: c.2.1.3 d.81.1.1

Probab=92.77  E-value=0.14  Score=47.85  Aligned_cols=33  Identities=27%  Similarity=0.284  Sum_probs=26.1

Q ss_pred             CCeEEEEcCCChhHHHHHHHHHHcC--CceEEEEe
Q 017760           11 GKTFLVTGGLGHVGSALCLELVRRG--AYQVRAFD   43 (366)
Q Consensus        11 ~~~VlITGgtGfiG~~L~~~L~~~g--~~~V~~~d   43 (366)
                      +++|.|.||+|++|+.+++.|.+++  ..+++.+.
T Consensus         6 ~~kV~IiGAtG~iG~~llr~L~~~~~~~~elv~i~   40 (340)
T 2hjs_A            6 PLNVAVVGATGSVGEALVGLLDERDFPLHRLHLLA   40 (340)
T ss_dssp             CCCEEEETTTSHHHHHHHHHHHHTTCCCSCEEEEE
T ss_pred             CcEEEEECCCCHHHHHHHHHHHhCCCCcEEEEEEe
Confidence            4689999999999999999999664  12455553

>5mdh_A Malate dehydrogenase; oxidoreductase, (NAD(A)-CHOH(D)); HET: NAD; 2.40A {Sus scrofa} SCOP: c.2.1.5 d.162.1.1 PDB: 4mdh_A*

Probab=92.74  E-value=0.045  Score=51.03  Aligned_cols=35  Identities=20%  Similarity=0.303  Sum_probs=30.0

Q ss_pred             CeEEEEcCCChhHHHHHHHHHHcCC-ce-----EEEEecCC
Q 017760           12 KTFLVTGGLGHVGSALCLELVRRGA-YQ-----VRAFDLRT   46 (366)
Q Consensus        12 ~~VlITGgtGfiG~~L~~~L~~~g~-~~-----V~~~dr~~   46 (366)
                      +||+||||+|++|++++..|...|. .+     ++++|+++
T Consensus         4 ~kV~V~GaaG~VG~~la~~L~~~~~~~e~~~~~l~L~Di~~   44 (333)
T 5mdh_A            4 IRVLVTGAAGQIAYSLLYSIGNGSVFGKDQPIILVLLDITP   44 (333)
T ss_dssp             EEEEESSTTSHHHHTTHHHHHTTTTTCTTCCEEEEEECCGG
T ss_pred             eEEEEECCCCHHHHHHHHHHHhCCCccccCCCEEEEEeCCC
Confidence            6899999999999999999998763 24     99999864

>4e12_A Diketoreductase; oxidoreductase, NADH; HET: 1PE; 1.93A {Acinetobacter baylyi} PDB: 4dyd_A* 4e13_A*

Probab=92.73  E-value=0.13  Score=46.52  Aligned_cols=37  Identities=27%  Similarity=0.486  Sum_probs=31.8

Q ss_pred             ccCCeEEEEcCCChhHHHHHHHHHHcCCceEEEEecCCC
Q 017760            9 IEGKTFLVTGGLGHVGSALCLELVRRGAYQVRAFDLRTN   47 (366)
Q Consensus         9 ~~~~~VlITGgtGfiG~~L~~~L~~~g~~~V~~~dr~~~   47 (366)
                      |++++|.|.| +|.+|+.++..|.+.| ++|++.|+++.
T Consensus         2 m~~~kV~VIG-aG~mG~~iA~~la~~G-~~V~l~d~~~~   38 (283)
T 4e12_A            2 TGITNVTVLG-TGVLGSQIAFQTAFHG-FAVTAYDINTD   38 (283)
T ss_dssp             CSCCEEEEEC-CSHHHHHHHHHHHHTT-CEEEEECSSHH
T ss_pred             CCCCEEEEEC-CCHHHHHHHHHHHhCC-CeEEEEeCCHH
Confidence            4567899995 6999999999999999 59999998753

>2r00_A Aspartate-semialdehyde dehydrogenase; conformational change, half-OF-sites-reactivity, protein evolution, sequence homology; HET: HTI; 2.03A {Vibrio cholerae} PDB: 2qz9_A* 2r00_C*

Probab=92.58  E-value=0.16  Score=47.32  Aligned_cols=34  Identities=18%  Similarity=0.206  Sum_probs=27.7

Q ss_pred             cCCeEEEEcCCChhHHHHHHHHHHc--CCceEEEEe
Q 017760           10 EGKTFLVTGGLGHVGSALCLELVRR--GAYQVRAFD   43 (366)
Q Consensus        10 ~~~~VlITGgtGfiG~~L~~~L~~~--g~~~V~~~d   43 (366)
                      +|++|.|.||+|++|+.+++.|.++  ...+++++.
T Consensus         2 ~~~kV~I~GAtG~iG~~llr~L~~~~~p~~elv~i~   37 (336)
T 2r00_A            2 QQFNVAIFGATGAVGETMLEVLQEREFPVDELFLLA   37 (336)
T ss_dssp             CCEEEEEETTTSHHHHHHHHHHHHTTCCEEEEEEEE
T ss_pred             CccEEEEECCCCHHHHHHHHHHhcCCCCCEEEEEEE
Confidence            3578999999999999999999987  323677665

>3qha_A Putative oxidoreductase; seattle structural genomics center for infectious disease, S mycobacterium avium 104, rossmann fold; 2.25A {Mycobacterium avium}

Probab=92.45  E-value=0.11  Score=47.42  Aligned_cols=36  Identities=19%  Similarity=0.374  Sum_probs=31.7

Q ss_pred             CCeEEEEcCCChhHHHHHHHHHHcCCceEEEEecCCCC
Q 017760           11 GKTFLVTGGLGHVGSALCLELVRRGAYQVRAFDLRTNS   48 (366)
Q Consensus        11 ~~~VlITGgtGfiG~~L~~~L~~~g~~~V~~~dr~~~~   48 (366)
                      +++|.|. |.|.+|..++..|.+.| ++|++.|+++..
T Consensus        15 ~~~I~vI-G~G~mG~~~A~~l~~~G-~~V~~~dr~~~~   50 (296)
T 3qha_A           15 QLKLGYI-GLGNMGAPMATRMTEWP-GGVTVYDIRIEA   50 (296)
T ss_dssp             CCCEEEE-CCSTTHHHHHHHHTTST-TCEEEECSSTTT
T ss_pred             CCeEEEE-CcCHHHHHHHHHHHHCC-CeEEEEeCCHHH
Confidence            4689999 58999999999999999 599999998754

>1wly_A CAAR, 2-haloacrylate reductase; NADPH-dependent oxidoreductase, oxidoreductase; 1.30A {Burkholderia SP}

Probab=92.29  E-value=0.13  Score=47.56  Aligned_cols=36  Identities=19%  Similarity=0.171  Sum_probs=32.7

Q ss_pred             cCCeEEEEcCCChhHHHHHHHHHHcCCceEEEEecCC
Q 017760           10 EGKTFLVTGGLGHVGSALCLELVRRGAYQVRAFDLRT   46 (366)
Q Consensus        10 ~~~~VlITGgtGfiG~~L~~~L~~~g~~~V~~~dr~~   46 (366)
                      .+++|+||||+|-+|..+++.+...|. +|+++++++
T Consensus       145 ~g~~vlV~Ga~ggiG~~~~~~a~~~G~-~Vi~~~~~~  180 (333)
T 1wly_A          145 PGDYVLIHAAAGGMGHIMVPWARHLGA-TVIGTVSTE  180 (333)
T ss_dssp             TTCEEEETTTTSTTHHHHHHHHHHTTC-EEEEEESSH
T ss_pred             CCCEEEEECCccHHHHHHHHHHHHCCC-EEEEEeCCH
Confidence            468999999999999999999999996 899998875

>2uyy_A N-PAC protein; long-chain dehydrogenase, cytokine; HET: NA7; 2.5A {Homo sapiens}

Probab=92.27  E-value=0.13  Score=47.12  Aligned_cols=37  Identities=24%  Similarity=0.391  Sum_probs=31.4

Q ss_pred             ccCCeEEEEcCCChhHHHHHHHHHHcCCceEEEEecCCC
Q 017760            9 IEGKTFLVTGGLGHVGSALCLELVRRGAYQVRAFDLRTN   47 (366)
Q Consensus         9 ~~~~~VlITGgtGfiG~~L~~~L~~~g~~~V~~~dr~~~   47 (366)
                      +.+++|.|.| .|.+|+.++..|.+.| ++|.+.|+++.
T Consensus        28 ~~~~~I~iIG-~G~mG~~~a~~l~~~g-~~V~~~~~~~~   64 (316)
T 2uyy_A           28 PTDKKIGFLG-LGLMGSGIVSNLLKMG-HTVTVWNRTAE   64 (316)
T ss_dssp             CCSSCEEEEC-CSHHHHHHHHHHHHTT-CCEEEECSSGG
T ss_pred             CCCCeEEEEc-ccHHHHHHHHHHHhCC-CEEEEEeCCHH
Confidence            3457899996 6999999999999999 58999988754

>1qor_A Quinone oxidoreductase; HET: NAP; 2.20A {Escherichia coli} SCOP: b.35.1.2 c.2.1.1

Probab=92.24  E-value=0.13  Score=47.47  Aligned_cols=36  Identities=22%  Similarity=0.221  Sum_probs=32.6

Q ss_pred             cCCeEEEEcCCChhHHHHHHHHHHcCCceEEEEecCC
Q 017760           10 EGKTFLVTGGLGHVGSALCLELVRRGAYQVRAFDLRT   46 (366)
Q Consensus        10 ~~~~VlITGgtGfiG~~L~~~L~~~g~~~V~~~dr~~   46 (366)
                      .+++|+||||+|-+|..+++.+...|. +|+++++++
T Consensus       140 ~g~~vlV~Ga~ggiG~~~~~~a~~~G~-~V~~~~~~~  175 (327)
T 1qor_A          140 PDEQFLFHAAAGGVGLIACQWAKALGA-KLIGTVGTA  175 (327)
T ss_dssp             TTCEEEESSTTBHHHHHHHHHHHHHTC-EEEEEESSH
T ss_pred             CCCEEEEECCCCHHHHHHHHHHHHcCC-EEEEEeCCH
Confidence            468999999999999999999999996 899998864

>3tl2_A Malate dehydrogenase; center for structural genomics of infectious diseases, csgid dehydrogenase, oxidoreductase, citric acid cycle; 1.70A {Bacillus anthracis}

Probab=92.22  E-value=0.16  Score=46.94  Aligned_cols=39  Identities=23%  Similarity=0.321  Sum_probs=32.7

Q ss_pred             ccccCCeEEEEcCCChhHHHHHHHHHHcCCceEEEEecCC
Q 017760            7 EGIEGKTFLVTGGLGHVGSALCLELVRRGAYQVRAFDLRT   46 (366)
Q Consensus         7 ~~~~~~~VlITGgtGfiG~~L~~~L~~~g~~~V~~~dr~~   46 (366)
                      |+|+.++|.|+|+ |.+|+.++..|...|..+|+++|+++
T Consensus         4 m~~~~~kv~ViGa-G~vG~~ia~~l~~~g~~~v~l~D~~~   42 (315)
T 3tl2_A            4 MTIKRKKVSVIGA-GFTGATTAFLLAQKELADVVLVDIPQ   42 (315)
T ss_dssp             CCCCCCEEEEECC-SHHHHHHHHHHHHTTCCEEEEECCGG
T ss_pred             cccCCCEEEEECC-CHHHHHHHHHHHhCCCCeEEEEeccc
Confidence            3455679999996 99999999999999832899999983

>1f0y_A HCDH, L-3-hydroxyacyl-COA dehydrogenase; abortive ternary complex, oxidoreductase; HET: CAA NAD; 1.80A {Homo sapiens} SCOP: a.100.1.3 c.2.1.6 PDB: 3rqs_A 1lsj_A* 1il0_A* 1lso_A* 1m76_A* 1m75_A* 1f14_A 1f12_A 1f17_A* 3had_A* 2hdh_A* 3hdh_A*

Probab=92.21  E-value=0.16  Score=46.27  Aligned_cols=37  Identities=27%  Similarity=0.342  Sum_probs=31.7

Q ss_pred             ccCCeEEEEcCCChhHHHHHHHHHHcCCceEEEEecCCC
Q 017760            9 IEGKTFLVTGGLGHVGSALCLELVRRGAYQVRAFDLRTN   47 (366)
Q Consensus         9 ~~~~~VlITGgtGfiG~~L~~~L~~~g~~~V~~~dr~~~   47 (366)
                      .++++|.|.|+ |.+|..++..|.+.| ++|++.|+++.
T Consensus        13 ~~~~~I~VIG~-G~mG~~iA~~la~~G-~~V~~~d~~~~   49 (302)
T 1f0y_A           13 IIVKHVTVIGG-GLMGAGIAQVAAATG-HTVVLVDQTED   49 (302)
T ss_dssp             CCCCEEEEECC-SHHHHHHHHHHHHTT-CEEEEECSCHH
T ss_pred             ccCCEEEEECC-CHHHHHHHHHHHhCC-CeEEEEECCHH
Confidence            34678999966 999999999999999 59999998753

>3gvi_A Malate dehydrogenase; NAD, oxidoreductase, tricarboxylic acid cycle, structural genomics; HET: ADP; 2.25A {Brucella melitensis biovar ABORTUS2308} PDB: 3gvh_A*

Probab=92.00  E-value=0.18  Score=46.76  Aligned_cols=40  Identities=18%  Similarity=0.280  Sum_probs=32.7

Q ss_pred             cccCCeEEEEcCCChhHHHHHHHHHHcCCceEEEEecCCCC
Q 017760            8 GIEGKTFLVTGGLGHVGSALCLELVRRGAYQVRAFDLRTNS   48 (366)
Q Consensus         8 ~~~~~~VlITGgtGfiG~~L~~~L~~~g~~~V~~~dr~~~~   48 (366)
                      .|+++||.|+|+ |.+|+.++..|...|..+|+++|+++..
T Consensus         4 ~m~~~kI~viGa-G~vG~~~a~~l~~~~~~~v~L~Di~~~~   43 (324)
T 3gvi_A            4 SMARNKIALIGS-GMIGGTLAHLAGLKELGDVVLFDIAEGT   43 (324)
T ss_dssp             --CCCEEEEECC-SHHHHHHHHHHHHTTCCEEEEECSSSSH
T ss_pred             CCcCCEEEEECC-CHHHHHHHHHHHhCCCCeEEEEeCCchh
Confidence            356789999997 9999999999999982289999998743

>4f3y_A DHPR, dihydrodipicolinate reductase; structural genomics, niaid, national institute of allergy AN infectious diseases; 2.10A {Burkholderia thailandensis}

Probab=91.99  E-value=0.12  Score=46.61  Aligned_cols=38  Identities=13%  Similarity=0.236  Sum_probs=29.6

Q ss_pred             ccCCeEEEEcCCChhHHHHHHHHHHcCCceEEE-EecCC
Q 017760            9 IEGKTFLVTGGLGHVGSALCLELVRRGAYQVRA-FDLRT   46 (366)
Q Consensus         9 ~~~~~VlITGgtGfiG~~L~~~L~~~g~~~V~~-~dr~~   46 (366)
                      |+|+||.|+|++|.+|+.+++.+.+..-.++.+ +|++.
T Consensus         5 M~mikV~V~Ga~G~MG~~i~~~l~~~~~~eLv~~~d~~~   43 (272)
T 4f3y_A            5 MSSMKIAIAGASGRMGRMLIEAVLAAPDATLVGALDRTG   43 (272)
T ss_dssp             -CCEEEEESSTTSHHHHHHHHHHHHCTTEEEEEEBCCTT
T ss_pred             ccccEEEEECCCCHHHHHHHHHHHhCCCCEEEEEEEecC
Confidence            556899999999999999999998764246666 46554

>3l9w_A Glutathione-regulated potassium-efflux system Pro linker, ancillary protein KEFF; potassium channel regulation, domains, antiport; HET: FMN AMP GSH; 1.75A {Escherichia coli} PDB: 3eyw_A* 3l9x_A*

Probab=91.88  E-value=0.057  Score=51.87  Aligned_cols=51  Identities=20%  Similarity=0.303  Sum_probs=39.8

Q ss_pred             CCeEEEEcCCChhHHHHHHHHHHcCCceEEEEecCCCCcccccccCCCeEEEEcc
Q 017760           11 GKTFLVTGGLGHVGSALCLELVRRGAYQVRAFDLRTNSPWSHLLINHGVHCIQGL   65 (366)
Q Consensus        11 ~~~VlITGgtGfiG~~L~~~L~~~g~~~V~~~dr~~~~~~~~~~~~~~v~~i~gD   65 (366)
                      .++|+|+|. |-+|+.+++.|.+.| ++|+++|+++..-  ..+...++..+.||
T Consensus         4 ~~~viIiG~-Gr~G~~va~~L~~~g-~~vvvId~d~~~v--~~~~~~g~~vi~GD   54 (413)
T 3l9w_A            4 GMRVIIAGF-GRFGQITGRLLLSSG-VKMVVLDHDPDHI--ETLRKFGMKVFYGD   54 (413)
T ss_dssp             CCSEEEECC-SHHHHHHHHHHHHTT-CCEEEEECCHHHH--HHHHHTTCCCEESC
T ss_pred             CCeEEEECC-CHHHHHHHHHHHHCC-CCEEEEECCHHHH--HHHHhCCCeEEEcC
Confidence            467999975 999999999999999 5899999886422  22334567788888

>1yb5_A Quinone oxidoreductase; medium-chain dehydrogenase/reductase, quinon reduction, structural genomics, structural genomics consort; HET: NAP; 1.85A {Homo sapiens} SCOP: b.35.1.2 c.2.1.1

Probab=91.82  E-value=0.2  Score=46.77  Aligned_cols=36  Identities=28%  Similarity=0.358  Sum_probs=32.6

Q ss_pred             cCCeEEEEcCCChhHHHHHHHHHHcCCceEEEEecCC
Q 017760           10 EGKTFLVTGGLGHVGSALCLELVRRGAYQVRAFDLRT   46 (366)
Q Consensus        10 ~~~~VlITGgtGfiG~~L~~~L~~~g~~~V~~~dr~~   46 (366)
                      .+++|+|+||+|-+|..+++.+...|+ +|+++++++
T Consensus       170 ~g~~vlV~GasggiG~~~~~~a~~~Ga-~Vi~~~~~~  205 (351)
T 1yb5_A          170 AGESVLVHGASGGVGLAACQIARAYGL-KILGTAGTE  205 (351)
T ss_dssp             TTCEEEEETCSSHHHHHHHHHHHHTTC-EEEEEESSH
T ss_pred             CcCEEEEECCCChHHHHHHHHHHHCCC-EEEEEeCCh
Confidence            468999999999999999999999996 899998775

>4b7c_A Probable oxidoreductase; NADP cofactor, rossmann fold; HET: MES; 2.10A {Pseudomonas aeruginosa PA01} PDB: 4b7x_A*

Probab=91.77  E-value=0.17  Score=46.75  Aligned_cols=36  Identities=25%  Similarity=0.352  Sum_probs=32.7

Q ss_pred             cCCeEEEEcCCChhHHHHHHHHHHcCCceEEEEecCC
Q 017760           10 EGKTFLVTGGLGHVGSALCLELVRRGAYQVRAFDLRT   46 (366)
Q Consensus        10 ~~~~VlITGgtGfiG~~L~~~L~~~g~~~V~~~dr~~   46 (366)
                      ++++|+|+|++|-+|..+++.+...|. +|+++++++
T Consensus       149 ~g~~vlI~Ga~g~iG~~~~~~a~~~Ga-~Vi~~~~~~  184 (336)
T 4b7c_A          149 NGETVVISGAAGAVGSVAGQIARLKGC-RVVGIAGGA  184 (336)
T ss_dssp             TTCEEEESSTTSHHHHHHHHHHHHTTC-EEEEEESSH
T ss_pred             CCCEEEEECCCCHHHHHHHHHHHHCCC-EEEEEeCCH
Confidence            468999999999999999999999996 899998775

>2j3h_A NADP-dependent oxidoreductase P1; double bond reductase (AT5G16970), APO form; 2.5A {Arabidopsis thaliana} PDB: 2j3i_A* 2j3j_A* 2j3k_A*

Probab=91.74  E-value=0.17  Score=46.88  Aligned_cols=36  Identities=25%  Similarity=0.200  Sum_probs=32.5

Q ss_pred             cCCeEEEEcCCChhHHHHHHHHHHcCCceEEEEecCC
Q 017760           10 EGKTFLVTGGLGHVGSALCLELVRRGAYQVRAFDLRT   46 (366)
Q Consensus        10 ~~~~VlITGgtGfiG~~L~~~L~~~g~~~V~~~dr~~   46 (366)
                      .+++|+|+||+|-+|..+++.+...|. +|+++++++
T Consensus       155 ~g~~vlI~Ga~g~iG~~~~~~a~~~G~-~V~~~~~~~  190 (345)
T 2j3h_A          155 EGETVYVSAASGAVGQLVGQLAKMMGC-YVVGSAGSK  190 (345)
T ss_dssp             TTCEEEESSTTSHHHHHHHHHHHHTTC-EEEEEESSH
T ss_pred             CCCEEEEECCCcHHHHHHHHHHHHCCC-EEEEEeCCH
Confidence            468999999999999999999999996 899998764

>2rcy_A Pyrroline carboxylate reductase; malaria, structural genomics, pyrroline reductase, oxidoredu structural genomics consortium, SGC; HET: NAP; 2.30A {Plasmodium falciparum}

Probab=91.67  E-value=0.18  Score=44.68  Aligned_cols=38  Identities=18%  Similarity=0.233  Sum_probs=31.9

Q ss_pred             ccCCeEEEEcCCChhHHHHHHHHHHcCC---ceEEEEecCCC
Q 017760            9 IEGKTFLVTGGLGHVGSALCLELVRRGA---YQVRAFDLRTN   47 (366)
Q Consensus         9 ~~~~~VlITGgtGfiG~~L~~~L~~~g~---~~V~~~dr~~~   47 (366)
                      |++|+|.|.|+ |-+|+.++..|.+.|.   ++|.+.|+++.
T Consensus         2 m~~m~i~iiG~-G~mG~~~a~~l~~~g~~~~~~v~~~~~~~~   42 (262)
T 2rcy_A            2 MENIKLGFMGL-GQMGSALAHGIANANIIKKENLFYYGPSKK   42 (262)
T ss_dssp             CSSSCEEEECC-SHHHHHHHHHHHHHTSSCGGGEEEECSSCC
T ss_pred             CCCCEEEEECc-CHHHHHHHHHHHHCCCCCCCeEEEEeCCcc
Confidence            45578999965 9999999999999983   48999988764

>3qy9_A DHPR, dihydrodipicolinate reductase; rossmann fold, NADH, NADPH, oxidoreductase; 1.80A {Staphylococcus aureus}

Probab=91.65  E-value=0.23  Score=44.02  Aligned_cols=36  Identities=11%  Similarity=0.231  Sum_probs=28.6

Q ss_pred             ccCCeEEEEcCCChhHHHHHHHHHHcCCceEEE-EecCC
Q 017760            9 IEGKTFLVTGGLGHVGSALCLELVRRGAYQVRA-FDLRT   46 (366)
Q Consensus         9 ~~~~~VlITGgtGfiG~~L~~~L~~~g~~~V~~-~dr~~   46 (366)
                      |+|+||.|+|+ |.+|+.+++.+.+.+. ++.+ +|+++
T Consensus         1 M~MmkI~ViGa-GrMG~~i~~~l~~~~~-eLva~~d~~~   37 (243)
T 3qy9_A            1 MASMKILLIGY-GAMNQRVARLAEEKGH-EIVGVIENTP   37 (243)
T ss_dssp             --CCEEEEECC-SHHHHHHHHHHHHTTC-EEEEEECSSC
T ss_pred             CCceEEEEECc-CHHHHHHHHHHHhCCC-EEEEEEecCc
Confidence            34689999999 9999999999999884 7766 56554

>3dtt_A NADP oxidoreductase; structural genomics, joint center for structural genomics, J protein structure initiative, PSI-2; HET: NAP; 1.70A {Arthrobacter SP}

Probab=91.57  E-value=0.22  Score=43.97  Aligned_cols=38  Identities=24%  Similarity=0.266  Sum_probs=31.7

Q ss_pred             cccCCeEEEEcCCChhHHHHHHHHHHcCCceEEEEecCCC
Q 017760            8 GIEGKTFLVTGGLGHVGSALCLELVRRGAYQVRAFDLRTN   47 (366)
Q Consensus         8 ~~~~~~VlITGgtGfiG~~L~~~L~~~g~~~V~~~dr~~~   47 (366)
                      .+.+++|.|. |+|.+|+++++.|.+.| ++|++.||++.
T Consensus        16 ~~~~~kIgiI-G~G~mG~alA~~L~~~G-~~V~~~~r~~~   53 (245)
T 3dtt_A           16 YFQGMKIAVL-GTGTVGRTMAGALADLG-HEVTIGTRDPK   53 (245)
T ss_dssp             ---CCEEEEE-CCSHHHHHHHHHHHHTT-CEEEEEESCHH
T ss_pred             ccCCCeEEEE-CCCHHHHHHHHHHHHCC-CEEEEEeCChh
Confidence            3557899999 69999999999999999 59999998754

>2j8z_A Quinone oxidoreductase; medium-chain dehydrogenase- reductases, QUIN oxidoreductase, oxidative stress response; HET: NAP; 2.50A {Homo sapiens} PDB: 2oby_A*

Probab=91.46  E-value=0.19  Score=46.94  Aligned_cols=36  Identities=25%  Similarity=0.186  Sum_probs=32.6

Q ss_pred             cCCeEEEEcCCChhHHHHHHHHHHcCCceEEEEecCC
Q 017760           10 EGKTFLVTGGLGHVGSALCLELVRRGAYQVRAFDLRT   46 (366)
Q Consensus        10 ~~~~VlITGgtGfiG~~L~~~L~~~g~~~V~~~dr~~   46 (366)
                      .+++|+|+||+|-+|..+++.+...|. +|+++++++
T Consensus       162 ~g~~vlV~Ga~ggiG~~~~~~a~~~Ga-~Vi~~~~~~  197 (354)
T 2j8z_A          162 AGDYVLIHAGLSGVGTAAIQLTRMAGA-IPLVTAGSQ  197 (354)
T ss_dssp             TTCEEEESSTTSHHHHHHHHHHHHTTC-EEEEEESCH
T ss_pred             CCCEEEEECCccHHHHHHHHHHHHcCC-EEEEEeCCH
Confidence            468999999999999999999999996 899998864

>1pzg_A LDH, lactate dehydrogenase; apicomplexa, APAD, tetramer, rossmann fold, oxidoreductase; HET: CME A3D; 1.60A {Toxoplasma gondii} SCOP: c.2.1.5 d.162.1.1 PDB: 1pzf_A* 1pze_A* 1pzh_A* 3om9_A* 1sov_A 1sow_A* 3czm_A*

Probab=91.44  E-value=0.23  Score=46.08  Aligned_cols=36  Identities=19%  Similarity=0.291  Sum_probs=31.0

Q ss_pred             CCeEEEEcCCChhHHHHHHHHHHcCCceEEEEecCCC
Q 017760           11 GKTFLVTGGLGHVGSALCLELVRRGAYQVRAFDLRTN   47 (366)
Q Consensus        11 ~~~VlITGgtGfiG~~L~~~L~~~g~~~V~~~dr~~~   47 (366)
                      ++||.|+|+ |.+|+.++..|.+.|..+|++.|+++.
T Consensus         9 ~~kI~VIGa-G~vG~~lA~~la~~g~~~V~L~D~~~~   44 (331)
T 1pzg_A            9 RKKVAMIGS-GMIGGTMGYLCALRELADVVLYDVVKG   44 (331)
T ss_dssp             CCEEEEECC-SHHHHHHHHHHHHHTCCEEEEECSSSS
T ss_pred             CCEEEEECC-CHHHHHHHHHHHhCCCCeEEEEECChh
Confidence            468999987 999999999999999327999999863

>3d0o_A L-LDH 1, L-lactate dehydrogenase 1; cytoplasm, glycolysis, NAD, oxidoreductase, phosphoprotein; 1.80A {Staphylococcus aureus} PDB: 3d4p_A* 3h3j_A*

Probab=91.41  E-value=0.2  Score=46.15  Aligned_cols=37  Identities=30%  Similarity=0.543  Sum_probs=31.6

Q ss_pred             ccCCeEEEEcCCChhHHHHHHHHHHcCC-ceEEEEecCC
Q 017760            9 IEGKTFLVTGGLGHVGSALCLELVRRGA-YQVRAFDLRT   46 (366)
Q Consensus         9 ~~~~~VlITGgtGfiG~~L~~~L~~~g~-~~V~~~dr~~   46 (366)
                      |+++||.|+|+ |.+|+.++..|...|. .+|.++|+++
T Consensus         4 m~~~KI~IIGa-G~vG~~la~~l~~~~~~~ei~L~Di~~   41 (317)
T 3d0o_A            4 FKGNKVVLIGN-GAVGSSYAFSLVNQSIVDELVIIDLDT   41 (317)
T ss_dssp             CCCCEEEEECC-SHHHHHHHHHHHHHCSCSEEEEECSCH
T ss_pred             CCCCEEEEECC-CHHHHHHHHHHHhCCCCCEEEEEeCCh
Confidence            45679999998 9999999999998873 5899999874

>1ks9_A KPA reductase;, 2-dehydropantoate 2-reductase; PANE, APBA, ketopantoate reductase, rossman fold, monomer, APO, oxidoreductase; 1.70A {Escherichia coli} SCOP: a.100.1.7 c.2.1.6 PDB: 1yon_A* 1yjq_A* 2ofp_A*

Probab=91.34  E-value=0.23  Score=44.50  Aligned_cols=34  Identities=21%  Similarity=0.303  Sum_probs=30.1

Q ss_pred             CeEEEEcCCChhHHHHHHHHHHcCCceEEEEecCCC
Q 017760           12 KTFLVTGGLGHVGSALCLELVRRGAYQVRAFDLRTN   47 (366)
Q Consensus        12 ~~VlITGgtGfiG~~L~~~L~~~g~~~V~~~dr~~~   47 (366)
                      |+|.|.|+ |.+|+.++..|.+.| ++|++++|++.
T Consensus         1 m~i~iiG~-G~~G~~~a~~l~~~g-~~V~~~~r~~~   34 (291)
T 1ks9_A            1 MKITVLGC-GALGQLWLTALCKQG-HEVQGWLRVPQ   34 (291)
T ss_dssp             CEEEEECC-SHHHHHHHHHHHHTT-CEEEEECSSCC
T ss_pred             CeEEEECc-CHHHHHHHHHHHhCC-CCEEEEEcCcc
Confidence            47999976 999999999999999 59999998764

>3doj_A AT3G25530, dehydrogenase-like protein; gamma-hydroxybutyrate dehydrogenase, 4-hydroxybutyrate dehydrogenase; 2.10A {Arabidopsis thaliana}

Probab=91.32  E-value=0.22  Score=45.57  Aligned_cols=38  Identities=24%  Similarity=0.486  Sum_probs=33.0

Q ss_pred             cccCCeEEEEcCCChhHHHHHHHHHHcCCceEEEEecCCC
Q 017760            8 GIEGKTFLVTGGLGHVGSALCLELVRRGAYQVRAFDLRTN   47 (366)
Q Consensus         8 ~~~~~~VlITGgtGfiG~~L~~~L~~~g~~~V~~~dr~~~   47 (366)
                      ...|++|.|. |.|.+|..++..|.+.| ++|++.||++.
T Consensus        18 ~~~m~~I~iI-G~G~mG~~~A~~l~~~G-~~V~~~dr~~~   55 (310)
T 3doj_A           18 GSHMMEVGFL-GLGIMGKAMSMNLLKNG-FKVTVWNRTLS   55 (310)
T ss_dssp             CCCSCEEEEE-CCSHHHHHHHHHHHHTT-CEEEEECSSGG
T ss_pred             cccCCEEEEE-CccHHHHHHHHHHHHCC-CeEEEEeCCHH
Confidence            3456899999 58999999999999999 59999998864

>1nyt_A Shikimate 5-dehydrogenase; alpha/beta domains, WIDE cleft separation, oxidoreductase; HET: NAP; 1.50A {Escherichia coli} SCOP: c.2.1.7 c.58.1.5

Probab=91.23  E-value=0.25  Score=44.42  Aligned_cols=37  Identities=19%  Similarity=0.256  Sum_probs=32.0

Q ss_pred             ccCCeEEEEcCCChhHHHHHHHHHHcCCceEEEEecCCC
Q 017760            9 IEGKTFLVTGGLGHVGSALCLELVRRGAYQVRAFDLRTN   47 (366)
Q Consensus         9 ~~~~~VlITGgtGfiG~~L~~~L~~~g~~~V~~~dr~~~   47 (366)
                      .++++++|+|+ |-+|++++..|.+.| .+|++.+|+..
T Consensus       117 l~~k~vlViGa-Gg~g~a~a~~L~~~G-~~V~v~~R~~~  153 (271)
T 1nyt_A          117 RPGLRILLIGA-GGASRGVLLPLLSLD-CAVTITNRTVS  153 (271)
T ss_dssp             CTTCEEEEECC-SHHHHHHHHHHHHTT-CEEEEECSSHH
T ss_pred             cCCCEEEEECC-cHHHHHHHHHHHHcC-CEEEEEECCHH
Confidence            45689999998 669999999999999 58999988753

>1t2d_A LDH-P, L-lactate dehydrogenase; ternary complex, oxidoreductase; HET: NAD; 1.10A {Plasmodium falciparum} SCOP: c.2.1.5 d.162.1.1 PDB: 1t25_A* 1t26_A* 1t2c_A* 1t24_A* 2x8l_A 2ydn_A* 2a94_A* 1u4s_A* 1u5a_A* 1u5c_A* 1u4o_A* 1t2e_A* 1xiv_A* 1ceq_A 1ldg_A* 1cet_A* 1oc4_A* 2a92_A* 2aa3_A*

Probab=91.14  E-value=0.25  Score=45.62  Aligned_cols=37  Identities=22%  Similarity=0.429  Sum_probs=31.6

Q ss_pred             cCCeEEEEcCCChhHHHHHHHHHHcCCceEEEEecCCC
Q 017760           10 EGKTFLVTGGLGHVGSALCLELVRRGAYQVRAFDLRTN   47 (366)
Q Consensus        10 ~~~~VlITGgtGfiG~~L~~~L~~~g~~~V~~~dr~~~   47 (366)
                      .++||.|+|+ |.+|+.++..|...|..+|+++|+++.
T Consensus         3 ~~~kI~VIGa-G~vG~~ia~~la~~g~~~v~L~Di~~~   39 (322)
T 1t2d_A            3 PKAKIVLVGS-GMIGGVMATLIVQKNLGDVVLFDIVKN   39 (322)
T ss_dssp             CCCEEEEECC-SHHHHHHHHHHHHTTCCEEEEECSSSS
T ss_pred             CCCEEEEECC-CHHHHHHHHHHHhCCCCeEEEEeCCHH
Confidence            4579999997 999999999999999426999998863

>2eez_A Alanine dehydrogenase; TTHA0216, structural genomic NPPSFA, national project on protein structural and function analyses; 2.71A {Thermus thermophilus}

Probab=91.14  E-value=0.33  Score=45.73  Aligned_cols=37  Identities=27%  Similarity=0.477  Sum_probs=33.1

Q ss_pred             ccCCeEEEEcCCChhHHHHHHHHHHcCCceEEEEecCCC
Q 017760            9 IEGKTFLVTGGLGHVGSALCLELVRRGAYQVRAFDLRTN   47 (366)
Q Consensus         9 ~~~~~VlITGgtGfiG~~L~~~L~~~g~~~V~~~dr~~~   47 (366)
                      ..+++|+|+|+ |-+|..+++.+...|. +|+++|+++.
T Consensus       164 l~~~~V~ViGa-G~iG~~~a~~l~~~Ga-~V~~~d~~~~  200 (369)
T 2eez_A          164 VAPASVVILGG-GTVGTNAAKIALGMGA-QVTILDVNHK  200 (369)
T ss_dssp             BCCCEEEEECC-SHHHHHHHHHHHHTTC-EEEEEESCHH
T ss_pred             CCCCEEEEECC-CHHHHHHHHHHHhCCC-EEEEEECCHH
Confidence            45689999999 9999999999999996 8999998753

>2ewd_A Lactate dehydrogenase,; protein-substrate_cofactor analog complex, oxidoreductase; HET: A3D; 2.00A {Cryptosporidium parvum} PDB: 2frm_A 2fn7_A* 2fnz_A* 2fm3_A

Probab=90.95  E-value=0.25  Score=45.47  Aligned_cols=36  Identities=19%  Similarity=0.398  Sum_probs=31.2

Q ss_pred             CCeEEEEcCCChhHHHHHHHHHHcCCceEEEEecCCC
Q 017760           11 GKTFLVTGGLGHVGSALCLELVRRGAYQVRAFDLRTN   47 (366)
Q Consensus        11 ~~~VlITGgtGfiG~~L~~~L~~~g~~~V~~~dr~~~   47 (366)
                      +++|.|.|+ |.+|+.++..|.+.|..+|+++|+++.
T Consensus         4 ~~kI~VIGa-G~~G~~ia~~la~~g~~~V~l~D~~~~   39 (317)
T 2ewd_A            4 RRKIAVIGS-GQIGGNIAYIVGKDNLADVVLFDIAEG   39 (317)
T ss_dssp             CCEEEEECC-SHHHHHHHHHHHHHTCCEEEEECSSSS
T ss_pred             CCEEEEECC-CHHHHHHHHHHHhCCCceEEEEeCCch
Confidence            478999987 999999999999999327999999863

>2ep5_A 350AA long hypothetical aspartate-semialdehyde dehydrogenase; oxidoreductase, structural genomics, NPPSFA; 2.40A {Sulfolobus tokodaii}

Probab=90.95  E-value=0.17  Score=47.35  Aligned_cols=35  Identities=14%  Similarity=0.212  Sum_probs=28.8

Q ss_pred             ccCCeEEEEcCCChhHHHHHHHHHHcCCceEEEEe
Q 017760            9 IEGKTFLVTGGLGHVGSALCLELVRRGAYQVRAFD   43 (366)
Q Consensus         9 ~~~~~VlITGgtGfiG~~L~~~L~~~g~~~V~~~d   43 (366)
                      +++++|.|.||+|++|+.+++.|.+....+++++.
T Consensus         2 ~~~~kV~IiGAtG~iG~~llr~L~~~p~~elvai~   36 (350)
T 2ep5_A            2 ADKIKVSLLGSTGMVGQKMVKMLAKHPYLELVKVS   36 (350)
T ss_dssp             CCCEEEEEESCSSHHHHHHHHHHTTCSSEEEEEEE
T ss_pred             CCCcEEEEECcCCHHHHHHHHHHHhCCCcEEEEEe
Confidence            34578999999999999999999887534777774

>1iz0_A Quinone oxidoreductase; APO-enzyme, riken structural genomics/proteomics initiative, RSGI, structural genomics; 2.30A {Thermus thermophilus} SCOP: b.35.1.2 c.2.1.1 PDB: 1iyz_A 2cf2_D

Probab=90.90  E-value=0.22  Score=45.24  Aligned_cols=37  Identities=27%  Similarity=0.309  Sum_probs=33.0

Q ss_pred             cCCeEEEEcCCChhHHHHHHHHHHcCCceEEEEecCCC
Q 017760           10 EGKTFLVTGGLGHVGSALCLELVRRGAYQVRAFDLRTN   47 (366)
Q Consensus        10 ~~~~VlITGgtGfiG~~L~~~L~~~g~~~V~~~dr~~~   47 (366)
                      .+.+|+|+|++|-+|...++.+...|. +|+++++++.
T Consensus       125 ~g~~vlV~Ga~G~vG~~~~~~a~~~Ga-~Vi~~~~~~~  161 (302)
T 1iz0_A          125 PGEKVLVQAAAGALGTAAVQVARAMGL-RVLAAASRPE  161 (302)
T ss_dssp             TTCEEEESSTTBHHHHHHHHHHHHTTC-EEEEEESSGG
T ss_pred             CCCEEEEECCCcHHHHHHHHHHHHCCC-EEEEEeCCHH
Confidence            468999999999999999999999996 8999998653

>3dr3_A N-acetyl-gamma-glutamyl-phosphate reductase; csgid target, ARGC, essential gene, amino-acid biosynthesis, arginine biosynthesis, cytoplasm; HET: MLT; 2.00A {Shigella flexneri} PDB: 2g17_A

Probab=90.89  E-value=0.21  Score=46.46  Aligned_cols=36  Identities=19%  Similarity=0.275  Sum_probs=29.7

Q ss_pred             CCeEEEEcCCChhHHHHHHHHHHcCCceEEEEecCC
Q 017760           11 GKTFLVTGGLGHVGSALCLELVRRGAYQVRAFDLRT   46 (366)
Q Consensus        11 ~~~VlITGgtGfiG~~L~~~L~~~g~~~V~~~dr~~   46 (366)
                      |++|.|.|+||++|..+++.|.+....++..+..+.
T Consensus         4 M~kv~IvGatG~vG~~l~~~L~~~p~~el~~l~s~~   39 (337)
T 3dr3_A            4 MLNTLIVGASGYAGAELVTYVNRHPHMNITALTVSA   39 (337)
T ss_dssp             CEEEEEETTTSHHHHHHHHHHHHCTTEEEEEEEEET
T ss_pred             ceEEEEECCCChHHHHHHHHHHhCCCCcEEEEEecC
Confidence            478999999999999999999985434788776554

>2eih_A Alcohol dehydrogenase; zinc ION binding protein, structural genomics, NPPSFA, natio project on protein structural and functional analyses; 2.30A {Thermus thermophilus}

Probab=90.85  E-value=0.25  Score=45.83  Aligned_cols=36  Identities=25%  Similarity=0.059  Sum_probs=32.6

Q ss_pred             cCCeEEEEcCCChhHHHHHHHHHHcCCceEEEEecCC
Q 017760           10 EGKTFLVTGGLGHVGSALCLELVRRGAYQVRAFDLRT   46 (366)
Q Consensus        10 ~~~~VlITGgtGfiG~~L~~~L~~~g~~~V~~~dr~~   46 (366)
                      .+++|+|+|++|-+|..+++.+...|. +|+++++++
T Consensus       166 ~g~~vlV~Gasg~iG~~~~~~a~~~G~-~Vi~~~~~~  201 (343)
T 2eih_A          166 PGDDVLVMAAGSGVSVAAIQIAKLFGA-RVIATAGSE  201 (343)
T ss_dssp             TTCEEEECSTTSTTHHHHHHHHHHTTC-EEEEEESSH
T ss_pred             CCCEEEEECCCchHHHHHHHHHHHCCC-EEEEEeCCH
Confidence            468999999999999999999999996 899998864

>1lld_A L-lactate dehydrogenase; oxidoreductase(CHOH (D)-NAD (A)); HET: NAD; 2.00A {Bifidobacterium longum subsp} SCOP: c.2.1.5 d.162.1.1 PDB: 1lth_T*

Probab=90.71  E-value=0.26  Score=45.18  Aligned_cols=34  Identities=29%  Similarity=0.492  Sum_probs=30.6

Q ss_pred             CCeEEEEcCCChhHHHHHHHHHHcCCc--eEEEEecCC
Q 017760           11 GKTFLVTGGLGHVGSALCLELVRRGAY--QVRAFDLRT   46 (366)
Q Consensus        11 ~~~VlITGgtGfiG~~L~~~L~~~g~~--~V~~~dr~~   46 (366)
                      +|+|.|.|+ |.+|..++..|.+.| +  +|+++|+++
T Consensus         7 ~mkI~IiGa-G~vG~~~a~~l~~~g-~~~~V~l~d~~~   42 (319)
T 1lld_A            7 PTKLAVIGA-GAVGSTLAFAAAQRG-IAREIVLEDIAK   42 (319)
T ss_dssp             CCEEEEECC-SHHHHHHHHHHHHTT-CCSEEEEECSSH
T ss_pred             CCEEEEECC-CHHHHHHHHHHHhCC-CCCEEEEEeCCh
Confidence            468999987 999999999999998 5  899999875

>3pdu_A 3-hydroxyisobutyrate dehydrogenase family protein; gamma-hydroxybutyrate dehydrogenase, succinic semialdehyde R glyoxylate metabolism; HET: NAP; 1.89A {Geobacter sulfurreducens}

Probab=90.60  E-value=0.2  Score=45.30  Aligned_cols=36  Identities=28%  Similarity=0.526  Sum_probs=31.2

Q ss_pred             CCeEEEEcCCChhHHHHHHHHHHcCCceEEEEecCCCC
Q 017760           11 GKTFLVTGGLGHVGSALCLELVRRGAYQVRAFDLRTNS   48 (366)
Q Consensus        11 ~~~VlITGgtGfiG~~L~~~L~~~g~~~V~~~dr~~~~   48 (366)
                      |++|.|. |.|.+|..++..|.+.| ++|++.||++..
T Consensus         1 M~~I~ii-G~G~mG~~~a~~l~~~G-~~V~~~dr~~~~   36 (287)
T 3pdu_A            1 MTTYGFL-GLGIMGGPMAANLVRAG-FDVTVWNRNPAK   36 (287)
T ss_dssp             CCCEEEE-CCSTTHHHHHHHHHHHT-CCEEEECSSGGG
T ss_pred             CCeEEEE-ccCHHHHHHHHHHHHCC-CeEEEEcCCHHH
Confidence            4689998 58999999999999999 599999988643

>3k96_A Glycerol-3-phosphate dehydrogenase [NAD(P)+]; GPSA, IDP01976, oxidoreductase, phospholipid biosynthesis; HET: EPE; 2.10A {Coxiella burnetii}

Probab=90.54  E-value=0.22  Score=46.74  Aligned_cols=36  Identities=31%  Similarity=0.481  Sum_probs=31.0

Q ss_pred             ccCCeEEEEcCCChhHHHHHHHHHHcCCceEEEEecCC
Q 017760            9 IEGKTFLVTGGLGHVGSALCLELVRRGAYQVRAFDLRT   46 (366)
Q Consensus         9 ~~~~~VlITGgtGfiG~~L~~~L~~~g~~~V~~~dr~~   46 (366)
                      +.+|+|.|.| +|.+|.+++..|.+.| ++|++.+|++
T Consensus        27 ~~~mkI~VIG-aG~mG~alA~~La~~G-~~V~l~~r~~   62 (356)
T 3k96_A           27 PFKHPIAILG-AGSWGTALALVLARKG-QKVRLWSYES   62 (356)
T ss_dssp             CCCSCEEEEC-CSHHHHHHHHHHHTTT-CCEEEECSCH
T ss_pred             ccCCeEEEEC-ccHHHHHHHHHHHHCC-CeEEEEeCCH
Confidence            3357899995 5999999999999999 5999999874

>1ur5_A Malate dehydrogenase; oxidoreductase, tricarboxylic acid cycle; HET: NAD; 1.75A {Chloroflexus aurantiacus} SCOP: c.2.1.5 d.162.1.1 PDB: 1uxg_A* 1guy_A* 1uxk_A* 1uxh_A* 1uxj_A* 1uxi_A*

Probab=90.41  E-value=0.3  Score=44.85  Aligned_cols=34  Identities=24%  Similarity=0.320  Sum_probs=30.1

Q ss_pred             CeEEEEcCCChhHHHHHHHHHHcCCceEEEEecCC
Q 017760           12 KTFLVTGGLGHVGSALCLELVRRGAYQVRAFDLRT   46 (366)
Q Consensus        12 ~~VlITGgtGfiG~~L~~~L~~~g~~~V~~~dr~~   46 (366)
                      +||.|+|+ |.+|+.++..|...|..+|+++|+++
T Consensus         3 ~kI~VIGa-G~vG~~~a~~la~~g~~~v~L~Di~~   36 (309)
T 1ur5_A            3 KKISIIGA-GFVGSTTAHWLAAKELGDIVLLDIVE   36 (309)
T ss_dssp             CEEEEECC-SHHHHHHHHHHHHTTCSEEEEECSSS
T ss_pred             CEEEEECC-CHHHHHHHHHHHHCCCCeEEEEeCCc
Confidence            68999998 99999999999999942699999875

>4eye_A Probable oxidoreductase; structural genomics, niaid, national institute of allergy AN infectious diseases; 2.10A {Mycobacterium abscessus}

Probab=90.41  E-value=0.26  Score=45.74  Aligned_cols=37  Identities=38%  Similarity=0.398  Sum_probs=33.1

Q ss_pred             cCCeEEEEcCCChhHHHHHHHHHHcCCceEEEEecCCC
Q 017760           10 EGKTFLVTGGLGHVGSALCLELVRRGAYQVRAFDLRTN   47 (366)
Q Consensus        10 ~~~~VlITGgtGfiG~~L~~~L~~~g~~~V~~~dr~~~   47 (366)
                      .+.+|+|+||+|-+|...++.+...|+ +|+++++++.
T Consensus       159 ~g~~VlV~Gasg~iG~~~~~~a~~~Ga-~Vi~~~~~~~  195 (342)
T 4eye_A          159 AGETVLVLGAAGGIGTAAIQIAKGMGA-KVIAVVNRTA  195 (342)
T ss_dssp             TTCEEEESSTTSHHHHHHHHHHHHTTC-EEEEEESSGG
T ss_pred             CCCEEEEECCCCHHHHHHHHHHHHcCC-EEEEEeCCHH
Confidence            468999999999999999999999996 8999988653

>4dup_A Quinone oxidoreductase; PSI-biology, structural genomics, protein structure initiati structural genomics research consortium, nysgrc; 2.45A {Rhizobium etli}

Probab=90.31  E-value=0.28  Score=45.71  Aligned_cols=37  Identities=30%  Similarity=0.355  Sum_probs=33.1

Q ss_pred             cCCeEEEEcCCChhHHHHHHHHHHcCCceEEEEecCCC
Q 017760           10 EGKTFLVTGGLGHVGSALCLELVRRGAYQVRAFDLRTN   47 (366)
Q Consensus        10 ~~~~VlITGgtGfiG~~L~~~L~~~g~~~V~~~dr~~~   47 (366)
                      .+.+|+|+||+|-+|...++.+...|. +|+++++++.
T Consensus       167 ~g~~VlV~Gg~g~iG~~~~~~a~~~Ga-~Vi~~~~~~~  203 (353)
T 4dup_A          167 EGESVLIHGGTSGIGTTAIQLARAFGA-EVYATAGSTG  203 (353)
T ss_dssp             TTCEEEESSTTSHHHHHHHHHHHHTTC-EEEEEESSHH
T ss_pred             CCCEEEEEcCCCHHHHHHHHHHHHcCC-EEEEEeCCHH
Confidence            468999999999999999999999996 8999987753

>3ggo_A Prephenate dehydrogenase; TYRA, HPP, NADH, alpha-beta, oxidoreductase; HET: NAI ENO; 2.15A {Aquifex aeolicus} PDB: 3ggg_D* 3ggp_A*

Probab=90.28  E-value=0.33  Score=44.62  Aligned_cols=36  Identities=22%  Similarity=0.616  Sum_probs=31.4

Q ss_pred             cCCeEEEEcCCChhHHHHHHHHHHcCCc--eEEEEecCCC
Q 017760           10 EGKTFLVTGGLGHVGSALCLELVRRGAY--QVRAFDLRTN   47 (366)
Q Consensus        10 ~~~~VlITGgtGfiG~~L~~~L~~~g~~--~V~~~dr~~~   47 (366)
                      ..++|.|.| .|.+|..+++.|.+.| +  +|++.|+++.
T Consensus        32 ~~~kI~IIG-~G~mG~slA~~l~~~G-~~~~V~~~dr~~~   69 (314)
T 3ggo_A           32 SMQNVLIVG-VGFMGGSFAKSLRRSG-FKGKIYGYDINPE   69 (314)
T ss_dssp             SCSEEEEES-CSHHHHHHHHHHHHTT-CCSEEEEECSCHH
T ss_pred             CCCEEEEEe-eCHHHHHHHHHHHhCC-CCCEEEEEECCHH
Confidence            347899997 8999999999999999 5  8999998753

>3hhp_A Malate dehydrogenase; MDH, citric acid cycle, TCA cycle, NAD, oxidoreductase, tricarboxylic acid cycle; 1.45A {Escherichia coli k-12} PDB: 2pwz_A 2cmd_A* 1emd_A* 1ib6_A* 1ie3_A* 4e0b_A*

Probab=90.18  E-value=0.3  Score=44.99  Aligned_cols=35  Identities=26%  Similarity=0.416  Sum_probs=30.4

Q ss_pred             CeEEEEcCCChhHHHHHHHHHHc-C-CceEEEEecCC
Q 017760           12 KTFLVTGGLGHVGSALCLELVRR-G-AYQVRAFDLRT   46 (366)
Q Consensus        12 ~~VlITGgtGfiG~~L~~~L~~~-g-~~~V~~~dr~~   46 (366)
                      |||.|+||+|.+|+.++..|.+. + ..+++++|+++
T Consensus         1 mKV~IiGAaG~VG~~~a~~L~~~~~~~~el~L~Di~~   37 (312)
T 3hhp_A            1 MKVAVLGAAGGIGQALALLLKTQLPSGSELSLYDIAP   37 (312)
T ss_dssp             CEEEEETTTSHHHHHHHHHHHHHSCTTEEEEEECSST
T ss_pred             CEEEEECCCCHHHHHHHHHHHhCCCCCceEEEEecCC
Confidence            58999999999999999999875 4 25899999986

>2vz8_A Fatty acid synthase; transferase, phosphopantetheine, multienzyme, megasynthase, fatty acid synthesis; 3.2A {Sus scrofa} PDB: 2vz9_A*

Probab=90.00  E-value=0.39  Score=56.29  Aligned_cols=56  Identities=23%  Similarity=0.170  Sum_probs=42.1

Q ss_pred             cCCeEEEEcCCChhHHHHHHHHHHcCCceEEEEecCCCCccc-----ccc--cCCCeEEEEcc
Q 017760           10 EGKTFLVTGGLGHVGSALCLELVRRGAYQVRAFDLRTNSPWS-----HLL--INHGVHCIQGL   65 (366)
Q Consensus        10 ~~~~VlITGgtGfiG~~L~~~L~~~g~~~V~~~dr~~~~~~~-----~~~--~~~~v~~i~gD   65 (366)
                      .+++++||||+|-||.++++.|.++|++.|++.+|+......     ..+  ....+.++.+|
T Consensus      1883 ~~k~~lITGgs~GIG~aia~~la~~Ga~~vvl~~R~~~~~~~~~~~~~~l~~~g~~v~~~~~D 1945 (2512)
T 2vz8_A         1883 PHKSYVITGGLGGFGLQLAQWLRLRGAQKLVLTSRSGIRTGYQARQVREWRRQGVQVLVSTSN 1945 (2512)
T ss_dssp             TTCEEEEESTTSHHHHHHHHHHHHTTCCEEEEECSSCCCSHHHHHHHHHHHHTTCEEEEECCC
T ss_pred             CCCEEEEECCCCCHHHHHHHHHHHCCCCEEEEEeCCCcchHHHHHHHHHHHhCCCEEEEEecC
Confidence            467899999999999999999999997458888887654311     111  13457788888

>2c0c_A Zinc binding alcohol dehydrogenase, domain containing 2; oxidoreductase, quinone oxidoreductase, medium-chain dehydrogenase/reductase; HET: NAP; 1.45A {Homo sapiens} PDB: 2x1h_A* 2x7h_A* 2wek_A*

Probab=90.00  E-value=0.28  Score=45.89  Aligned_cols=36  Identities=25%  Similarity=0.180  Sum_probs=32.4

Q ss_pred             cCCeEEEEcCCChhHHHHHHHHHHcCCceEEEEecCC
Q 017760           10 EGKTFLVTGGLGHVGSALCLELVRRGAYQVRAFDLRT   46 (366)
Q Consensus        10 ~~~~VlITGgtGfiG~~L~~~L~~~g~~~V~~~dr~~   46 (366)
                      .+.+|+|+||+|-+|..+++.+...|+ +|+++++++
T Consensus       163 ~g~~VlV~Ga~G~iG~~~~q~a~~~Ga-~Vi~~~~~~  198 (362)
T 2c0c_A          163 EGKKVLVTAAAGGTGQFAMQLSKKAKC-HVIGTCSSD  198 (362)
T ss_dssp             TTCEEEETTTTBTTHHHHHHHHHHTTC-EEEEEESSH
T ss_pred             CCCEEEEeCCCcHHHHHHHHHHHhCCC-EEEEEECCH
Confidence            468999999999999999999999996 899998764

>1y6j_A L-lactate dehydrogenase; southeast collaboratory for structural genomics, secsg, protein struc initiative, PSI, oxidoreductase; 3.01A {Clostridium thermocellum} SCOP: c.2.1.5 d.162.1.1

Probab=89.96  E-value=0.32  Score=44.84  Aligned_cols=36  Identities=17%  Similarity=0.342  Sum_probs=30.0

Q ss_pred             CCeEEEEcCCChhHHHHHHHHHHcCC-ceEEEEecCCC
Q 017760           11 GKTFLVTGGLGHVGSALCLELVRRGA-YQVRAFDLRTN   47 (366)
Q Consensus        11 ~~~VlITGgtGfiG~~L~~~L~~~g~-~~V~~~dr~~~   47 (366)
                      ++||.|+|+ |++|..++..|...|. .+|+++|+++.
T Consensus         7 ~~KI~IiGa-G~vG~~~a~~l~~~~~~~ev~L~Di~~~   43 (318)
T 1y6j_A            7 RSKVAIIGA-GFVGASAAFTMALRQTANELVLIDVFKE   43 (318)
T ss_dssp             CCCEEEECC-SHHHHHHHHHHHHTTCSSEEEEECCC--
T ss_pred             CCEEEEECC-CHHHHHHHHHHHhCCCCCEEEEEeCChH
Confidence            478999997 9999999999999872 38999999864

>3qwb_A Probable quinone oxidoreductase; rossmann fold, quinone oxidoreductases, NADPH, cytoplasm and oxidoreductase; HET: NDP; 1.59A {Saccharomyces cerevisiae} PDB: 3qwa_A*

Probab=89.86  E-value=0.32  Score=44.85  Aligned_cols=36  Identities=28%  Similarity=0.289  Sum_probs=32.5

Q ss_pred             cCCeEEEEcCCChhHHHHHHHHHHcCCceEEEEecCC
Q 017760           10 EGKTFLVTGGLGHVGSALCLELVRRGAYQVRAFDLRT   46 (366)
Q Consensus        10 ~~~~VlITGgtGfiG~~L~~~L~~~g~~~V~~~dr~~   46 (366)
                      ++.+|+|+||+|-+|...++.+...|. +|+++++++
T Consensus       148 ~g~~vlV~Ga~g~iG~~~~~~a~~~Ga-~Vi~~~~~~  183 (334)
T 3qwb_A          148 KGDYVLLFAAAGGVGLILNQLLKMKGA-HTIAVASTD  183 (334)
T ss_dssp             TTCEEEESSTTBHHHHHHHHHHHHTTC-EEEEEESSH
T ss_pred             CCCEEEEECCCCHHHHHHHHHHHHCCC-EEEEEeCCH
Confidence            468999999999999999999999996 899998864

>2q3e_A UDP-glucose 6-dehydrogenase; hexamer, structural genomics, S genomics consortium, SGC, oxidoreductase; HET: NAD UPG; 2.00A {Homo sapiens} PDB: 2qg4_A* 3khu_A* 3itk_A* 3tdk_A* 3ptz_A* 3prj_A* 3tf5_A

Probab=89.83  E-value=0.31  Score=47.44  Aligned_cols=35  Identities=26%  Similarity=0.381  Sum_probs=30.6

Q ss_pred             cCCeEEEEcCCChhHHHHHHHHHHc--CCceEEEEecCC
Q 017760           10 EGKTFLVTGGLGHVGSALCLELVRR--GAYQVRAFDLRT   46 (366)
Q Consensus        10 ~~~~VlITGgtGfiG~~L~~~L~~~--g~~~V~~~dr~~   46 (366)
                      ++|+|.|.| +|++|..++..|.+.  | ++|+++|+++
T Consensus         4 ~~mkI~VIG-~G~mG~~lA~~La~~g~G-~~V~~~d~~~   40 (467)
T 2q3e_A            4 EIKKICCIG-AGYVGGPTCSVIAHMCPE-IRVTVVDVNE   40 (467)
T ss_dssp             CCCEEEEEC-CSTTHHHHHHHHHHHCTT-SEEEEECSCH
T ss_pred             CccEEEEEC-CCHHHHHHHHHHHhcCCC-CEEEEEECCH
Confidence            357899995 799999999999999  7 5999999875

>3pwk_A Aspartate-semialdehyde dehydrogenase; NADP binding, oxidoreductase-oxidoreductase I complex; HET: 25A L14; 1.50A {Streptococcus pneumoniae} PDB: 2gyy_A* 2gz2_A* 2gz3_A* 2gz1_A* 3pws_A* 3pyl_A 3pyx_A* 3pzb_A* 3q11_A* 3q1l_A

Probab=89.78  E-value=0.42  Score=45.00  Aligned_cols=33  Identities=27%  Similarity=0.359  Sum_probs=26.0

Q ss_pred             CCeEEEEcCCChhHHHHHHHHHHcCC--ceEEEEe
Q 017760           11 GKTFLVTGGLGHVGSALCLELVRRGA--YQVRAFD   43 (366)
Q Consensus        11 ~~~VlITGgtGfiG~~L~~~L~~~g~--~~V~~~d   43 (366)
                      +++|.|.||||++|..|++.|.+.+.  .++..+.
T Consensus         2 ~~kVaIvGATG~vG~eLlrlL~~~~~p~~el~~~a   36 (366)
T 3pwk_A            2 GYTVAVVGATGAVGAQMIKMLEESTLPIDKIRYLA   36 (366)
T ss_dssp             CEEEEEETTTSHHHHHHHHHHHTCCCCEEEEEEEE
T ss_pred             CcEEEEECCCChHHHHHHHHHhcCCCCcEEEEEEE
Confidence            36899999999999999999998752  2445554

>3gms_A Putative NADPH:quinone reductase; structural genomics, putative quinone oxidoreductase, unknown function, PSI-2; 1.76A {Bacillus thuringiensis}

Probab=89.76  E-value=0.34  Score=44.79  Aligned_cols=37  Identities=11%  Similarity=0.038  Sum_probs=33.2

Q ss_pred             cCCeEEEEcCCChhHHHHHHHHHHcCCceEEEEecCCC
Q 017760           10 EGKTFLVTGGLGHVGSALCLELVRRGAYQVRAFDLRTN   47 (366)
Q Consensus        10 ~~~~VlITGgtGfiG~~L~~~L~~~g~~~V~~~dr~~~   47 (366)
                      .+.+|+|+|++|-+|...++.+...|. +|+++++++.
T Consensus       144 ~g~~VlV~Ga~g~iG~~~~~~a~~~Ga-~Vi~~~~~~~  180 (340)
T 3gms_A          144 RNDVLLVNACGSAIGHLFAQLSQILNF-RLIAVTRNNK  180 (340)
T ss_dssp             TTCEEEESSTTSHHHHHHHHHHHHHTC-EEEEEESSST
T ss_pred             CCCEEEEeCCccHHHHHHHHHHHHcCC-EEEEEeCCHH
Confidence            468999999999999999999999996 8999998764

>2zb4_A Prostaglandin reductase 2; rossmann fold, alternative splicing, cytoplasm, NADP, oxidoreductase; HET: NAP 5OP; 1.63A {Homo sapiens} PDB: 2zb7_A* 2zb8_A* 2w98_A* 2vna_A* 2w4q_A* 1vj1_A 2zb3_A*

Probab=89.74  E-value=0.32  Score=45.35  Aligned_cols=35  Identities=26%  Similarity=0.162  Sum_probs=31.5

Q ss_pred             CeEEEEcCCChhHHHHHHHHHHcCCceEEEEecCC
Q 017760           12 KTFLVTGGLGHVGSALCLELVRRGAYQVRAFDLRT   46 (366)
Q Consensus        12 ~~VlITGgtGfiG~~L~~~L~~~g~~~V~~~dr~~   46 (366)
                      ++|+||||+|-+|..+++.+...|..+|+++++++
T Consensus       162 ~~vlI~GasggiG~~~~~~a~~~Ga~~Vi~~~~~~  196 (357)
T 2zb4_A          162 KTMVVSGAAGACGSVAGQIGHFLGCSRVVGICGTH  196 (357)
T ss_dssp             CEEEESSTTBHHHHHHHHHHHHTTCSEEEEEESCH
T ss_pred             cEEEEECCCcHHHHHHHHHHHHCCCCeEEEEeCCH
Confidence            89999999999999999999999943899998764

>3jyn_A Quinone oxidoreductase; rossmann fold, protein-NADPH complex; HET: NDP; 2.01A {Pseudomonas syringae PV} PDB: 3jyl_A*

Probab=89.69  E-value=0.32  Score=44.74  Aligned_cols=36  Identities=25%  Similarity=0.273  Sum_probs=32.5

Q ss_pred             cCCeEEEEcCCChhHHHHHHHHHHcCCceEEEEecCC
Q 017760           10 EGKTFLVTGGLGHVGSALCLELVRRGAYQVRAFDLRT   46 (366)
Q Consensus        10 ~~~~VlITGgtGfiG~~L~~~L~~~g~~~V~~~dr~~   46 (366)
                      ++.+|+|+||+|-+|...++.+...|. +|+++++++
T Consensus       140 ~g~~VlV~Ga~g~iG~~~~~~a~~~Ga-~Vi~~~~~~  175 (325)
T 3jyn_A          140 PGEIILFHAAAGGVGSLACQWAKALGA-KLIGTVSSP  175 (325)
T ss_dssp             TTCEEEESSTTSHHHHHHHHHHHHHTC-EEEEEESSH
T ss_pred             CCCEEEEEcCCcHHHHHHHHHHHHCCC-EEEEEeCCH
Confidence            468999999999999999999999996 899998764

>2hjr_A Malate dehydrogenase; malaria, structural genomics, structural genomics consortium, SGC, oxidoreductase; HET: CIT APR; 2.20A {Cryptosporidium parvum}

Probab=89.56  E-value=0.41  Score=44.31  Aligned_cols=36  Identities=28%  Similarity=0.460  Sum_probs=31.0

Q ss_pred             CCeEEEEcCCChhHHHHHHHHHHcCCceEEEEecCCC
Q 017760           11 GKTFLVTGGLGHVGSALCLELVRRGAYQVRAFDLRTN   47 (366)
Q Consensus        11 ~~~VlITGgtGfiG~~L~~~L~~~g~~~V~~~dr~~~   47 (366)
                      +++|.|+|+ |.+|+.++..|...|..+|++.|+++.
T Consensus        14 ~~kI~ViGa-G~vG~~iA~~la~~g~~~V~L~Di~~~   49 (328)
T 2hjr_A           14 RKKISIIGA-GQIGSTIALLLGQKDLGDVYMFDIIEG   49 (328)
T ss_dssp             CCEEEEECC-SHHHHHHHHHHHHTTCCEEEEECSSTT
T ss_pred             CCEEEEECC-CHHHHHHHHHHHhCCCCeEEEEECCHH
Confidence            468999987 999999999999999427999999864

>4g65_A TRK system potassium uptake protein TRKA; structural genomics, center for structural genomics of infec diseases, csgid, niaid; HET: MSE; 2.09A {Vibrio vulnificus}

Probab=89.49  E-value=0.11  Score=50.66  Aligned_cols=51  Identities=20%  Similarity=0.334  Sum_probs=39.4

Q ss_pred             CCeEEEEcCCChhHHHHHHHHHHcCCceEEEEecCCCCccccccc-CCCeEEEEcc
Q 017760           11 GKTFLVTGGLGHVGSALCLELVRRGAYQVRAFDLRTNSPWSHLLI-NHGVHCIQGL   65 (366)
Q Consensus        11 ~~~VlITGgtGfiG~~L~~~L~~~g~~~V~~~dr~~~~~~~~~~~-~~~v~~i~gD   65 (366)
                      .|+|+|.| .|-+|++|++.|.+.| |+|+++|.++..-  ..+. .-++..+.||
T Consensus         3 ~M~iiI~G-~G~vG~~la~~L~~~~-~~v~vId~d~~~~--~~~~~~~~~~~i~Gd   54 (461)
T 4g65_A            3 AMKIIILG-AGQVGGTLAENLVGEN-NDITIVDKDGDRL--RELQDKYDLRVVNGH   54 (461)
T ss_dssp             CEEEEEEC-CSHHHHHHHHHTCSTT-EEEEEEESCHHHH--HHHHHHSSCEEEESC
T ss_pred             cCEEEEEC-CCHHHHHHHHHHHHCC-CCEEEEECCHHHH--HHHHHhcCcEEEEEc
Confidence            47899984 5999999999999999 7999999875322  2222 2378889999

>2izz_A Pyrroline-5-carboxylate reductase 1; amino-acid biosynthesis, NADP, oxidoreductase, proline biosy; HET: NAD; 1.95A {Homo sapiens} PDB: 2ger_A 2gr9_A* 2gra_A*

Probab=89.48  E-value=0.32  Score=44.80  Aligned_cols=40  Identities=15%  Similarity=0.132  Sum_probs=31.0

Q ss_pred             ccccCCeEEEEcCCChhHHHHHHHHHHcCC---ceEEEEecCCC
Q 017760            7 EGIEGKTFLVTGGLGHVGSALCLELVRRGA---YQVRAFDLRTN   47 (366)
Q Consensus         7 ~~~~~~~VlITGgtGfiG~~L~~~L~~~g~---~~V~~~dr~~~   47 (366)
                      .+|++|+|.|.| .|.+|..++..|.+.|.   ++|++.+|++.
T Consensus        18 ~~~~~mkI~iIG-~G~mG~ala~~L~~~G~~~~~~V~v~~r~~~   60 (322)
T 2izz_A           18 LYFQSMSVGFIG-AGQLAFALAKGFTAAGVLAAHKIMASSPDMD   60 (322)
T ss_dssp             ----CCCEEEES-CSHHHHHHHHHHHHTTSSCGGGEEEECSCTT
T ss_pred             hccCCCEEEEEC-CCHHHHHHHHHHHHCCCCCcceEEEECCCcc
Confidence            345567899996 59999999999999983   58999988764

>3cky_A 2-hydroxymethyl glutarate dehydrogenase; rossmann fold, two domain enzyme, oxidoreductase; 2.30A {Eubacterium barkeri}

Probab=89.47  E-value=0.37  Score=43.56  Aligned_cols=35  Identities=31%  Similarity=0.572  Sum_probs=30.0

Q ss_pred             cCCeEEEEcCCChhHHHHHHHHHHcCCceEEEEecCC
Q 017760           10 EGKTFLVTGGLGHVGSALCLELVRRGAYQVRAFDLRT   46 (366)
Q Consensus        10 ~~~~VlITGgtGfiG~~L~~~L~~~g~~~V~~~dr~~   46 (366)
                      ++++|.|.| .|.+|+.++..|.+.| ++|++.|+++
T Consensus         3 ~~~~i~iiG-~G~~G~~~a~~l~~~g-~~V~~~~~~~   37 (301)
T 3cky_A            3 KSIKIGFIG-LGAMGKPMAINLLKEG-VTVYAFDLME   37 (301)
T ss_dssp             -CCEEEEEC-CCTTHHHHHHHHHHTT-CEEEEECSSH
T ss_pred             CCCEEEEEC-ccHHHHHHHHHHHHCC-CeEEEEeCCH
Confidence            347899996 7999999999999999 5899998875

>3pqe_A L-LDH, L-lactate dehydrogenase; FBP, oxidoreductase; 2.20A {Bacillus subtilis} PDB: 3pqf_A* 3pqd_A*

Probab=89.45  E-value=0.38  Score=44.53  Aligned_cols=78  Identities=19%  Similarity=0.281  Sum_probs=47.7

Q ss_pred             cCCeEEEEcCCChhHHHHHHHHHHcCC-ceEEEEecCCCCccc-----cc---ccCCCeEEEEccccCCCCCceEEEEeC
Q 017760           10 EGKTFLVTGGLGHVGSALCLELVRRGA-YQVRAFDLRTNSPWS-----HL---LINHGVHCIQGLRKNNRKCLYTCAVRP   80 (366)
Q Consensus        10 ~~~~VlITGgtGfiG~~L~~~L~~~g~-~~V~~~dr~~~~~~~-----~~---~~~~~v~~i~gDks~~~~~l~~~ilRp   80 (366)
                      .++||.|+|+ |.+|+.++..|...|. .+|+++|+++.....     .+   ..+.+++...+|. ..-.+-+.+++=.
T Consensus         4 ~~~kI~ViGa-G~vG~~~a~~l~~~~~~~~l~l~D~~~~k~~g~a~DL~~~~~~~~~~v~i~~~~~-~a~~~aDvVvi~a   81 (326)
T 3pqe_A            4 HVNKVALIGA-GFVGSSYAFALINQGITDELVVIDVNKEKAMGDVMDLNHGKAFAPQPVKTSYGTY-EDCKDADIVCICA   81 (326)
T ss_dssp             SCCEEEEECC-SHHHHHHHHHHHHHTCCSEEEEECSCHHHHHHHHHHHHHTGGGSSSCCEEEEECG-GGGTTCSEEEECC
T ss_pred             CCCEEEEECC-CHHHHHHHHHHHhCCCCceEEEEecchHHHHHHHHHHHhccccccCCeEEEeCcH-HHhCCCCEEEEec
Confidence            4579999995 9999999999999883 489999986532110     00   1113445544442 2223455666655


Q ss_pred             CccccCCCC
Q 017760           81 AAIYGPGEE   89 (366)
Q Consensus        81 ~~iyGp~~~   89 (366)
                      +.-..|++.
T Consensus        82 g~p~kpG~~   90 (326)
T 3pqe_A           82 GANQKPGET   90 (326)
T ss_dssp             SCCCCTTCC
T ss_pred             ccCCCCCcc
Confidence            544555543

>3g79_A NDP-N-acetyl-D-galactosaminuronic acid dehydrogen; structural genomics, protein structure initiative; 2.40A {Methanosarcina mazei GO1}

Probab=89.41  E-value=0.33  Score=47.40  Aligned_cols=38  Identities=21%  Similarity=0.246  Sum_probs=33.9

Q ss_pred             cccCCeEEEEcCCChhHHHHHHHHHHc-CCc-eEEEEecCCC
Q 017760            8 GIEGKTFLVTGGLGHVGSALCLELVRR-GAY-QVRAFDLRTN   47 (366)
Q Consensus         8 ~~~~~~VlITGgtGfiG~~L~~~L~~~-g~~-~V~~~dr~~~   47 (366)
                      ++++|+|.|. |+|++|..++..|.+. | + +|+++|+++.
T Consensus        15 ~~~~mkIaVI-GlG~mG~~lA~~la~~~G-~~~V~~~D~~~~   54 (478)
T 3g79_A           15 RGPIKKIGVL-GMGYVGIPAAVLFADAPC-FEKVLGFQRNSK   54 (478)
T ss_dssp             HCSCCEEEEE-CCSTTHHHHHHHHHHSTT-CCEEEEECCCCT
T ss_pred             cCCCCEEEEE-CcCHHHHHHHHHHHHhCC-CCeEEEEECChh
Confidence            3566899998 7899999999999999 9 8 8999999876

>1hyh_A L-hicdh, L-2-hydroxyisocaproate dehydrogenase; L-2-hydroxycarboxylate dehydrogenase, L-lactate dehydrogenas oxidoreductase (CHOH(D)-NAD+(A)); HET: NAD; 2.20A {Weissella confusa} SCOP: c.2.1.5 d.162.1.1

Probab=89.35  E-value=0.37  Score=44.05  Aligned_cols=35  Identities=26%  Similarity=0.439  Sum_probs=30.7

Q ss_pred             CCeEEEEcCCChhHHHHHHHHHHcCC-ceEEEEecCC
Q 017760           11 GKTFLVTGGLGHVGSALCLELVRRGA-YQVRAFDLRT   46 (366)
Q Consensus        11 ~~~VlITGgtGfiG~~L~~~L~~~g~-~~V~~~dr~~   46 (366)
                      |++|.|.| +|.+|+.++..|.+.|. ++|+++|+++
T Consensus         1 m~kI~VIG-aG~~G~~la~~L~~~g~~~~V~l~d~~~   36 (309)
T 1hyh_A            1 ARKIGIIG-LGNVGAAVAHGLIAQGVADDYVFIDANE   36 (309)
T ss_dssp             CCEEEEEC-CSHHHHHHHHHHHHHTCCSEEEEECSSH
T ss_pred             CCEEEEEC-CCHHHHHHHHHHHhCCCCCEEEEEcCCH
Confidence            36899998 89999999999999883 5899999875

>3l6d_A Putative oxidoreductase; structural genomics, protein structure initiative, oxidoredu PSI-2; HET: MSE; 1.90A {Pseudomonas putida}

Probab=89.33  E-value=0.41  Score=43.70  Aligned_cols=37  Identities=22%  Similarity=0.344  Sum_probs=31.8

Q ss_pred             ccCCeEEEEcCCChhHHHHHHHHHHcCCceEEEEecCCC
Q 017760            9 IEGKTFLVTGGLGHVGSALCLELVRRGAYQVRAFDLRTN   47 (366)
Q Consensus         9 ~~~~~VlITGgtGfiG~~L~~~L~~~g~~~V~~~dr~~~   47 (366)
                      ..+++|.|. |.|.+|..+++.|.+.| ++|++.||++.
T Consensus         7 ~~~~~IgiI-G~G~mG~~~A~~l~~~G-~~V~~~dr~~~   43 (306)
T 3l6d_A            7 SFEFDVSVI-GLGAMGTIMAQVLLKQG-KRVAIWNRSPG   43 (306)
T ss_dssp             CCSCSEEEE-CCSHHHHHHHHHHHHTT-CCEEEECSSHH
T ss_pred             cCCCeEEEE-CCCHHHHHHHHHHHHCC-CEEEEEeCCHH
Confidence            345789998 58999999999999999 58999998764

>4dpk_A Malonyl-COA/succinyl-COA reductase; dinucleotide binding, dimerization domain, NADP, oxidoreductase; 2.05A {Sulfolobus tokodaii} PDB: 4dpm_A*

Probab=89.25  E-value=0.3  Score=45.89  Aligned_cols=37  Identities=14%  Similarity=0.050  Sum_probs=29.1

Q ss_pred             cCCeEEEEcCCChhHHHHHHHHHHcCCceEEEEecCC
Q 017760           10 EGKTFLVTGGLGHVGSALCLELVRRGAYQVRAFDLRT   46 (366)
Q Consensus        10 ~~~~VlITGgtGfiG~~L~~~L~~~g~~~V~~~dr~~   46 (366)
                      ++.+|.|.||||++|..|.+.|.+....++..+..+.
T Consensus         6 ~~~kVaIvGATGyvG~eLlrlL~~hP~~el~~l~S~~   42 (359)
T 4dpk_A            6 RTLKAAILGATGLVGIEYVRMLSNHPYIKPAYLAGKG   42 (359)
T ss_dssp             CCEEEEETTTTSTTHHHHHHHHTTCSSEEEEEEEEST
T ss_pred             CCCeEEEECCCCHHHHHHHHHHHhCCCceEEEEECch
Confidence            3568999999999999999988876544677665443

>4dpl_A Malonyl-COA/succinyl-COA reductase; dinucleotide binding, dimerization domain, NADP, oxidoreductase; HET: NAP; 1.90A {Sulfolobus tokodaii} PDB: 4dpk_A* 4dpm_A*

Probab=89.25  E-value=0.3  Score=45.89  Aligned_cols=37  Identities=14%  Similarity=0.050  Sum_probs=29.1

Q ss_pred             cCCeEEEEcCCChhHHHHHHHHHHcCCceEEEEecCC
Q 017760           10 EGKTFLVTGGLGHVGSALCLELVRRGAYQVRAFDLRT   46 (366)
Q Consensus        10 ~~~~VlITGgtGfiG~~L~~~L~~~g~~~V~~~dr~~   46 (366)
                      ++.+|.|.||||++|..|.+.|.+....++..+..+.
T Consensus         6 ~~~kVaIvGATGyvG~eLlrlL~~hP~~el~~l~S~~   42 (359)
T 4dpl_A            6 RTLKAAILGATGLVGIEYVRMLSNHPYIKPAYLAGKG   42 (359)
T ss_dssp             CCEEEEETTTTSTTHHHHHHHHTTCSSEEEEEEEEST
T ss_pred             CCCeEEEECCCCHHHHHHHHHHHhCCCceEEEEECch
Confidence            3568999999999999999988876544677665443

>1dih_A Dihydrodipicolinate reductase; oxidoreductase; HET: NDP; 2.20A {Escherichia coli} SCOP: c.2.1.3 d.81.1.3 PDB: 1arz_A* 1dru_A* 1drv_A* 1drw_A*

Probab=89.23  E-value=0.2  Score=45.21  Aligned_cols=37  Identities=19%  Similarity=0.244  Sum_probs=28.5

Q ss_pred             ccCCeEEEEcCCChhHHHHHHHHHHc-CCceEE-EEecCC
Q 017760            9 IEGKTFLVTGGLGHVGSALCLELVRR-GAYQVR-AFDLRT   46 (366)
Q Consensus         9 ~~~~~VlITGgtGfiG~~L~~~L~~~-g~~~V~-~~dr~~   46 (366)
                      +++++|.|+|++|.+|+.+++.+.+. + ++++ ++|+++
T Consensus         3 ~~~mkV~V~Ga~G~mG~~~~~~~~~~~~-~elva~~d~~~   41 (273)
T 1dih_A            3 DANIRVAIAGAGGRMGRQLIQAALALEG-VQLGAALEREG   41 (273)
T ss_dssp             CCBEEEEETTTTSHHHHHHHHHHHHSTT-EECCCEECCTT
T ss_pred             CCCcEEEEECCCCHHHHHHHHHHHhCCC-CEEEEEEecCc
Confidence            34579999999999999999998854 5 5777 445543

>1guz_A Malate dehydrogenase; oxidoreductase, tricarboxylic acid cycle, NAD; HET: NAD; 2.0A {Chlorobium vibrioforme} SCOP: c.2.1.5 d.162.1.1 PDB: 1gv1_A 1gv0_A*

Probab=89.12  E-value=0.43  Score=43.74  Aligned_cols=34  Identities=21%  Similarity=0.417  Sum_probs=29.9

Q ss_pred             CeEEEEcCCChhHHHHHHHHHHc--CCceEEEEecCCC
Q 017760           12 KTFLVTGGLGHVGSALCLELVRR--GAYQVRAFDLRTN   47 (366)
Q Consensus        12 ~~VlITGgtGfiG~~L~~~L~~~--g~~~V~~~dr~~~   47 (366)
                      |||.|+|+ |.+|..++..|.+.  | ++|+++|+++.
T Consensus         1 mkI~VIGa-G~vG~~la~~la~~~~g-~~V~l~D~~~~   36 (310)
T 1guz_A            1 MKITVIGA-GNVGATTAFRLAEKQLA-RELVLLDVVEG   36 (310)
T ss_dssp             CEEEEECC-SHHHHHHHHHHHHTTCC-SEEEEECSSSS
T ss_pred             CEEEEECC-CHHHHHHHHHHHhCCCC-CEEEEEeCChh
Confidence            48999988 99999999999985  6 69999999864

>3hsk_A Aspartate-semialdehyde dehydrogenase; candida albicans NADP complex, amino-acid biosynthesis; HET: NAP; 2.20A {Candida albicans}

Probab=89.08  E-value=0.37  Score=45.58  Aligned_cols=34  Identities=26%  Similarity=0.409  Sum_probs=27.6

Q ss_pred             ccCCeEEEEcCCChhHHHHHHHHHHcCCceEEEE
Q 017760            9 IEGKTFLVTGGLGHVGSALCLELVRRGAYQVRAF   42 (366)
Q Consensus         9 ~~~~~VlITGgtGfiG~~L~~~L~~~g~~~V~~~   42 (366)
                      |++.+|.|.||||++|..+++.|.+...-++..+
T Consensus        17 M~~~kVaIvGAtG~vG~ell~lL~~hp~~el~~l   50 (381)
T 3hsk_A           17 MSVKKAGVLGATGSVGQRFILLLSKHPEFEIHAL   50 (381)
T ss_dssp             -CCEEEEEETTTSHHHHHHHHHHTTCSSEEEEEE
T ss_pred             CCccEEEEECCCChHHHHHHHHHHcCCCceEEEe
Confidence            5567899999999999999999988764467554

>1mv8_A GMD, GDP-mannose 6-dehydrogenase; rossman fold, domain-swapped dimer, enzyme complex with COFA product, oxidoreductase; HET: SUC NAD GDX; 1.55A {Pseudomonas aeruginosa} SCOP: a.100.1.4 c.2.1.6 c.26.3.1 PDB: 1mfz_A* 1muu_A*

Probab=89.03  E-value=0.37  Score=46.40  Aligned_cols=33  Identities=30%  Similarity=0.391  Sum_probs=29.5

Q ss_pred             CeEEEEcCCChhHHHHHHHHHHcCCceEEEEecCC
Q 017760           12 KTFLVTGGLGHVGSALCLELVRRGAYQVRAFDLRT   46 (366)
Q Consensus        12 ~~VlITGgtGfiG~~L~~~L~~~g~~~V~~~dr~~   46 (366)
                      |+|.|.| +|++|..++..|.+.| ++|+++|+++
T Consensus         1 mkI~VIG-~G~vG~~~A~~la~~G-~~V~~~d~~~   33 (436)
T 1mv8_A            1 MRISIFG-LGYVGAVCAGCLSARG-HEVIGVDVSS   33 (436)
T ss_dssp             CEEEEEC-CSTTHHHHHHHHHHTT-CEEEEECSCH
T ss_pred             CEEEEEC-CCHHHHHHHHHHHHCC-CEEEEEECCH
Confidence            4789995 8999999999999999 5999999875

>2v6b_A L-LDH, L-lactate dehydrogenase; oxidoreductase, radioresistance, NAD, cytoplasm, mesophilic, glycolysis; 2.50A {Deinococcus radiodurans}

Probab=89.02  E-value=0.41  Score=43.76  Aligned_cols=33  Identities=33%  Similarity=0.415  Sum_probs=29.8

Q ss_pred             CeEEEEcCCChhHHHHHHHHHHcCCc--eEEEEecCC
Q 017760           12 KTFLVTGGLGHVGSALCLELVRRGAY--QVRAFDLRT   46 (366)
Q Consensus        12 ~~VlITGgtGfiG~~L~~~L~~~g~~--~V~~~dr~~   46 (366)
                      |||.|+|+ |.+|+.++..|...| +  +|+++|+++
T Consensus         1 mkI~VIGa-G~vG~~la~~la~~g-~~~eV~L~D~~~   35 (304)
T 2v6b_A            1 MKVGVVGT-GFVGSTAAFALVLRG-SCSELVLVDRDE   35 (304)
T ss_dssp             CEEEEECC-SHHHHHHHHHHHHTT-CCSEEEEECSSH
T ss_pred             CEEEEECC-CHHHHHHHHHHHhCC-CCCEEEEEeCCH
Confidence            48999987 999999999999998 5  899999875

>4aj2_A L-lactate dehydrogenase A chain; oxidoreductase-inhibitor complex, fragment-based LEAD genera inhibitors; HET: 52C; 1.75A {Rattus norvegicus} PDB: 4aj1_A* 4aje_A* 4ajh_A* 4aji_A* 4ajj_A* 4ajk_A* 4ajl_A* 4ajn_A* 4ajo_A* 4al4_A* 4aj4_A* 4ajp_A* 1i10_A* 3h3f_A* 9ldt_A* 9ldb_A* 1t2f_A* 1i0z_A* 5ldh_A* 1ldm_A* ...

Probab=89.00  E-value=0.46  Score=44.06  Aligned_cols=42  Identities=19%  Similarity=0.302  Sum_probs=33.1

Q ss_pred             cccccccCCeEEEEcCCChhHHHHHHHHHHcCC-ceEEEEecCC
Q 017760            4 SENEGIEGKTFLVTGGLGHVGSALCLELVRRGA-YQVRAFDLRT   46 (366)
Q Consensus         4 ~~~~~~~~~~VlITGgtGfiG~~L~~~L~~~g~-~~V~~~dr~~   46 (366)
                      ++......+||.|+|+ |.+|+.++..|+.+|. .+|+++|++.
T Consensus        12 ~~~~~~~~~kV~ViGa-G~vG~~~a~~l~~~~~~~el~L~Di~~   54 (331)
T 4aj2_A           12 LKEEQVPQNKITVVGV-GAVGMACAISILMKDLADELALVDVIE   54 (331)
T ss_dssp             CC---CCSSEEEEECC-SHHHHHHHHHHHHTTCCSEEEEECSCH
T ss_pred             cccccCCCCEEEEECC-CHHHHHHHHHHHhCCCCceEEEEeCCh
Confidence            3444566789999997 9999999999999883 4899999875

>3vtf_A UDP-glucose 6-dehydrogenase; two discrete alpha/beta domains, oxidoreducta; HET: UPG; 2.00A {Pyrobaculum islandicum}

Probab=88.93  E-value=0.45  Score=45.97  Aligned_cols=37  Identities=27%  Similarity=0.415  Sum_probs=32.7

Q ss_pred             cccCCeEEEEcCCChhHHHHHHHHHHcCCceEEEEecCC
Q 017760            8 GIEGKTFLVTGGLGHVGSALCLELVRRGAYQVRAFDLRT   46 (366)
Q Consensus         8 ~~~~~~VlITGgtGfiG~~L~~~L~~~g~~~V~~~dr~~   46 (366)
                      +..|.+|.|. |.||+|--++..|.+.| ++|+++|+++
T Consensus        18 ~~~m~~IaVi-GlGYVGLp~A~~~A~~G-~~V~g~Did~   54 (444)
T 3vtf_A           18 GSHMASLSVL-GLGYVGVVHAVGFALLG-HRVVGYDVNP   54 (444)
T ss_dssp             TCCCCEEEEE-CCSHHHHHHHHHHHHHT-CEEEEECSCH
T ss_pred             CCCCCEEEEE-ccCHHHHHHHHHHHhCC-CcEEEEECCH
Confidence            3457899998 89999999999999999 6999999885

>1lnq_A MTHK channels, potassium channel related protein; rossman fold, helix bundle, membrane protein; 3.30A {Methanothermobacter thermautotrophicusorganism_taxid} SCOP: c.2.1.9 d.286.1.1 f.14.1.1 PDB: 3rbz_A

Probab=88.92  E-value=0.15  Score=47.32  Aligned_cols=49  Identities=10%  Similarity=0.099  Sum_probs=38.9

Q ss_pred             CCeEEEEcCCChhHHHHHHHHHHcCCceEEEEecCCCCcccccccCCCeEEEEcc
Q 017760           11 GKTFLVTGGLGHVGSALCLELVRRGAYQVRAFDLRTNSPWSHLLINHGVHCIQGL   65 (366)
Q Consensus        11 ~~~VlITGgtGfiG~~L~~~L~~~g~~~V~~~dr~~~~~~~~~~~~~~v~~i~gD   65 (366)
                      .++++|+|+ |.+|+.+++.|.+.| + |+++|+++...  + ....++.++.||
T Consensus       115 ~~~viI~G~-G~~g~~l~~~L~~~g-~-v~vid~~~~~~--~-~~~~~~~~i~gd  163 (336)
T 1lnq_A          115 SRHVVICGW-SESTLECLRELRGSE-V-FVLAEDENVRK--K-VLRSGANFVHGD  163 (336)
T ss_dssp             -CEEEEESC-CHHHHHHHTTGGGSC-E-EEEESCGGGHH--H-HHHTTCEEEESC
T ss_pred             cCCEEEECC-cHHHHHHHHHHHhCC-c-EEEEeCChhhh--h-HHhCCcEEEEeC
Confidence            357999985 999999999999999 6 99998775432  2 334678999999

>3ldh_A Lactate dehydrogenase; oxidoreductase, CHOH donor, NAD acceptor; HET: NAD; 3.00A {Squalus acanthias} SCOP: i.12.1.1

Probab=88.88  E-value=0.56  Score=43.47  Aligned_cols=80  Identities=18%  Similarity=0.140  Sum_probs=49.5

Q ss_pred             cCCeEEEEcCCChhHHHHHHHHHHcCC-ceEEEEecCCCCccc--ccc-----cCCCeEEEEccccCCCCCceEEEEeCC
Q 017760           10 EGKTFLVTGGLGHVGSALCLELVRRGA-YQVRAFDLRTNSPWS--HLL-----INHGVHCIQGLRKNNRKCLYTCAVRPA   81 (366)
Q Consensus        10 ~~~~VlITGgtGfiG~~L~~~L~~~g~-~~V~~~dr~~~~~~~--~~~-----~~~~v~~i~gDks~~~~~l~~~ilRp~   81 (366)
                      ..+||.|+|+ |.+|+.++..|...|. ++|+++|+++.....  .++     .....+....+....-.+-+.+++=.+
T Consensus        20 ~~~kV~ViGa-G~vG~~~a~~la~~g~~~ev~L~Di~~~~~~g~a~DL~~~~~~~~~~~i~~t~d~~~~~daDiVIitaG   98 (330)
T 3ldh_A           20 SYNKITVVGC-DAVGMADAISVLMKDLADEVALVDVMEDKLKGEMMDLEHGSLFLHTAKIVSGKDYSVSAGSKLVVITAG   98 (330)
T ss_dssp             CCCEEEEEST-THHHHHHHHHHHHHCCCSEEEEECSCHHHHHHHHHHHHHHGGGSCCSEEEEESSSCSCSSCSEEEECCS
T ss_pred             CCCEEEEECC-CHHHHHHHHHHHhCCCCCeEEEEECCHHHHHHHHHHhhhhhhcccCCeEEEcCCHHHhCCCCEEEEeCC
Confidence            5689999998 9999999999999883 489999986532111  000     011223332222223445567777666


Q ss_pred             ccccCCCCC
Q 017760           82 AIYGPGEER   90 (366)
Q Consensus        82 ~iyGp~~~~   90 (366)
                      .-..||+.+
T Consensus        99 ~p~kpG~tR  107 (330)
T 3ldh_A           99 ARQQEGESR  107 (330)
T ss_dssp             CCCCSSCCT
T ss_pred             CCCCCCCCH
Confidence            666666543

>3p7m_A Malate dehydrogenase; putative dehydrogenase, enzyme, structural genomics, center structural genomics of infectious diseases, csgid; 2.20A {Francisella tularensis}

Probab=88.83  E-value=0.51  Score=43.55  Aligned_cols=39  Identities=21%  Similarity=0.332  Sum_probs=32.6

Q ss_pred             ccCCeEEEEcCCChhHHHHHHHHHHcCCceEEEEecCCCC
Q 017760            9 IEGKTFLVTGGLGHVGSALCLELVRRGAYQVRAFDLRTNS   48 (366)
Q Consensus         9 ~~~~~VlITGgtGfiG~~L~~~L~~~g~~~V~~~dr~~~~   48 (366)
                      |+++||.|+| +|.+|+.++..|...|..+|+++|+++..
T Consensus         3 m~~~kI~iiG-aG~vG~~~a~~l~~~~~~~v~l~Di~~~~   41 (321)
T 3p7m_A            3 MARKKITLVG-AGNIGGTLAHLALIKQLGDVVLFDIAQGM   41 (321)
T ss_dssp             CCCCEEEEEC-CSHHHHHHHHHHHHTTCCEEEEECSSSSH
T ss_pred             CCCCEEEEEC-CCHHHHHHHHHHHhCCCceEEEEeCChHH
Confidence            4568999998 59999999999999883289999998743

>3tnl_A Shikimate dehydrogenase; structural genomics, center for structural genomics of infec diseases, csgid; HET: NAD SKM; 1.45A {Listeria monocytogenes} PDB: 3toz_A*

Probab=88.81  E-value=0.55  Score=43.24  Aligned_cols=37  Identities=24%  Similarity=0.579  Sum_probs=32.4

Q ss_pred             ccCCeEEEEcCCChhHHHHHHHHHHcCCceEEEEecCC
Q 017760            9 IEGKTFLVTGGLGHVGSALCLELVRRGAYQVRAFDLRT   46 (366)
Q Consensus         9 ~~~~~VlITGgtGfiG~~L~~~L~~~g~~~V~~~dr~~   46 (366)
                      .++++++|+|+ |-+|++++..|.+.|..+|++.+|++
T Consensus       152 l~gk~~lVlGa-GG~g~aia~~L~~~Ga~~V~i~nR~~  188 (315)
T 3tnl_A          152 IIGKKMTICGA-GGAATAICIQAALDGVKEISIFNRKD  188 (315)
T ss_dssp             CTTSEEEEECC-SHHHHHHHHHHHHTTCSEEEEEECSS
T ss_pred             ccCCEEEEECC-ChHHHHHHHHHHHCCCCEEEEEECCC
Confidence            45789999987 78999999999999976899999884

>1ldn_A L-lactate dehydrogenase; oxidoreductase(CHOH(D)-NAD(A)); HET: FBP NAD; 2.50A {Geobacillus stearothermophilus} SCOP: c.2.1.5 d.162.1.1 PDB: 1ldb_A 2ldb_A*

Probab=88.77  E-value=0.51  Score=43.42  Aligned_cols=36  Identities=28%  Similarity=0.534  Sum_probs=30.9

Q ss_pred             cCCeEEEEcCCChhHHHHHHHHHHcC-CceEEEEecCC
Q 017760           10 EGKTFLVTGGLGHVGSALCLELVRRG-AYQVRAFDLRT   46 (366)
Q Consensus        10 ~~~~VlITGgtGfiG~~L~~~L~~~g-~~~V~~~dr~~   46 (366)
                      +++||.|+|+ |.+|+.++..|...| ..+|+++|+++
T Consensus         5 ~~~kI~IIGa-G~vG~sla~~l~~~~~~~ev~l~Di~~   41 (316)
T 1ldn_A            5 GGARVVVIGA-GFVGASYVFALMNQGIADEIVLIDANE   41 (316)
T ss_dssp             TSCEEEEECC-SHHHHHHHHHHHHHTCCSEEEEECSSH
T ss_pred             CCCEEEEECc-CHHHHHHHHHHHhCCCCCEEEEEeCCc
Confidence            4579999998 999999999998876 35899999975

>3zen_D Fatty acid synthase; transferase, mycolic acid biosynthesis, multifunctional ENZY substrate channeling; HET: FMN; 7.50A {Mycobacterium smegmatis} PDB: 4b3y_A*

Probab=88.72  E-value=0.45  Score=56.37  Aligned_cols=39  Identities=23%  Similarity=0.276  Sum_probs=35.1

Q ss_pred             ccCCeEEEEcCCCh-hHHHHHHHHHHcCCceEEEEecCCCC
Q 017760            9 IEGKTFLVTGGLGH-VGSALCLELVRRGAYQVRAFDLRTNS   48 (366)
Q Consensus         9 ~~~~~VlITGgtGf-iG~~L~~~L~~~g~~~V~~~dr~~~~   48 (366)
                      .++++++||||++- ||.++++.|++.|+ +|++.+++...
T Consensus      2134 l~gKvaLVTGAs~GsIG~AiA~~La~~GA-~Vvi~~r~~~~ 2173 (3089)
T 3zen_D         2134 XXDEVAVVTGASKGSIAASVVGQLLDGGA-TVIATTSRLDD 2173 (3089)
T ss_dssp             CCCCEEEEESCCTTSHHHHHHHHHHHTTC-EEEEEESCCSH
T ss_pred             CCCCEEEEeCCChhHHHHHHHHHHHHCCC-EEEEEeCChhh
Confidence            56789999999999 99999999999996 89999988654

>3pid_A UDP-glucose 6-dehydrogenase; rossmann fold, oxidoreductase; 1.40A {Klebsiella pneumoniae} PDB: 3pln_A* 3pjg_A* 3phl_A* 3plr_A*

Probab=88.71  E-value=0.42  Score=46.05  Aligned_cols=36  Identities=22%  Similarity=0.257  Sum_probs=30.3

Q ss_pred             ccCCeEEEEcCCChhHHHHHHHHHHcCCceEEEEecCCC
Q 017760            9 IEGKTFLVTGGLGHVGSALCLELVRRGAYQVRAFDLRTN   47 (366)
Q Consensus         9 ~~~~~VlITGgtGfiG~~L~~~L~~~g~~~V~~~dr~~~   47 (366)
                      +.+|+|.|. |+|++|..++..|.+ | ++|+++|+++.
T Consensus        34 ~~~mkIaVI-GlG~mG~~lA~~La~-G-~~V~~~D~~~~   69 (432)
T 3pid_A           34 SEFMKITIS-GTGYVGLSNGVLIAQ-N-HEVVALDIVQA   69 (432)
T ss_dssp             -CCCEEEEE-CCSHHHHHHHHHHHT-T-SEEEEECSCHH
T ss_pred             cCCCEEEEE-CcCHHHHHHHHHHHc-C-CeEEEEecCHH
Confidence            456799998 579999999999988 9 69999998753

>3tri_A Pyrroline-5-carboxylate reductase; amino acid biosynthesis, oxidoreductase; HET: NAP; 2.50A {Coxiella burnetii}

Probab=88.71  E-value=0.39  Score=43.29  Aligned_cols=36  Identities=17%  Similarity=0.447  Sum_probs=30.7

Q ss_pred             cCCeEEEEcCCChhHHHHHHHHHHcCCc---eEEEEecCCC
Q 017760           10 EGKTFLVTGGLGHVGSALCLELVRRGAY---QVRAFDLRTN   47 (366)
Q Consensus        10 ~~~~VlITGgtGfiG~~L~~~L~~~g~~---~V~~~dr~~~   47 (366)
                      ++++|.|.|+ |.+|++++..|.+.| +   +|++.|+++.
T Consensus         2 ~~~~I~iIG~-G~mG~aia~~l~~~g-~~~~~V~v~dr~~~   40 (280)
T 3tri_A            2 NTSNITFIGG-GNMARNIVVGLIANG-YDPNRICVTNRSLD   40 (280)
T ss_dssp             CCSCEEEESC-SHHHHHHHHHHHHTT-CCGGGEEEECSSSH
T ss_pred             CCCEEEEEcc-cHHHHHHHHHHHHCC-CCCCeEEEEeCCHH
Confidence            4578999955 999999999999999 5   7999998764

>1jvb_A NAD(H)-dependent alcohol dehydrogenase; archaeon, zinc, oxidoreductase; HET: MSE; 1.85A {Sulfolobus solfataricus} SCOP: b.35.1.2 c.2.1.1 PDB: 1r37_A* 1nto_A 1nvg_A 3i4c_A 2eer_A*

Probab=88.67  E-value=0.49  Score=43.83  Aligned_cols=36  Identities=31%  Similarity=0.381  Sum_probs=32.3

Q ss_pred             cCCeEEEEcCCChhHHHHHHHHHHc-CCceEEEEecCC
Q 017760           10 EGKTFLVTGGLGHVGSALCLELVRR-GAYQVRAFDLRT   46 (366)
Q Consensus        10 ~~~~VlITGgtGfiG~~L~~~L~~~-g~~~V~~~dr~~   46 (366)
                      .+++|+|||++|-+|..+++.+... |. +|+++++++
T Consensus       170 ~g~~vlV~Gagg~iG~~~~~~a~~~~Ga-~Vi~~~~~~  206 (347)
T 1jvb_A          170 PTKTLLVVGAGGGLGTMAVQIAKAVSGA-TIIGVDVRE  206 (347)
T ss_dssp             TTCEEEEETTTSHHHHHHHHHHHHHTCC-EEEEEESSH
T ss_pred             CCCEEEEECCCccHHHHHHHHHHHcCCC-eEEEEcCCH
Confidence            4689999999999999999999999 96 899998764

>3lk7_A UDP-N-acetylmuramoylalanine--D-glutamate ligase; agalacitae, PSI, MCSG, structural genomics, midwest center for structural genomics; HET: MSE; 1.50A {Streptococcus agalactiae}

Probab=88.67  E-value=0.48  Score=45.83  Aligned_cols=55  Identities=27%  Similarity=0.341  Sum_probs=41.9

Q ss_pred             ccCCeEEEEcCCChhHHHHHHHHHHcCCceEEEEecCCCC--cccccccCCCeEEEEcc
Q 017760            9 IEGKTFLVTGGLGHVGSALCLELVRRGAYQVRAFDLRTNS--PWSHLLINHGVHCIQGL   65 (366)
Q Consensus         9 ~~~~~VlITGgtGfiG~~L~~~L~~~g~~~V~~~dr~~~~--~~~~~~~~~~v~~i~gD   65 (366)
                      .++++|+|.|. |-.|..+++.|.++| ++|.+.|.+...  +....+...++++..|.
T Consensus         7 ~~~k~v~viG~-G~sG~s~A~~l~~~G-~~V~~~D~~~~~~~~~~~~L~~~gi~~~~g~   63 (451)
T 3lk7_A            7 FENKKVLVLGL-ARSGEAAARLLAKLG-AIVTVNDGKPFDENPTAQSLLEEGIKVVCGS   63 (451)
T ss_dssp             TTTCEEEEECC-TTTHHHHHHHHHHTT-CEEEEEESSCGGGCHHHHHHHHTTCEEEESC
T ss_pred             cCCCEEEEEee-CHHHHHHHHHHHhCC-CEEEEEeCCcccCChHHHHHHhCCCEEEECC
Confidence            46789999988 779999999999999 599999997531  22234445678887774

>3jyo_A Quinate/shikimate dehydrogenase; enzyme-cofactor complex, amino-acid biosynthesis, aromatic A biosynthesis, NAD, oxidoreductase; HET: NAD; 1.00A {Corynebacterium glutamicum} PDB: 3jyp_A* 3jyq_A* 2nlo_A

Probab=88.67  E-value=0.53  Score=42.60  Aligned_cols=38  Identities=29%  Similarity=0.470  Sum_probs=32.7

Q ss_pred             ccCCeEEEEcCCChhHHHHHHHHHHcCCceEEEEecCCC
Q 017760            9 IEGKTFLVTGGLGHVGSALCLELVRRGAYQVRAFDLRTN   47 (366)
Q Consensus         9 ~~~~~VlITGgtGfiG~~L~~~L~~~g~~~V~~~dr~~~   47 (366)
                      .++++++|+|+ |-+|++++..|.+.|..+|++.+|+..
T Consensus       125 l~~k~vlVlGa-GG~g~aia~~L~~~G~~~v~i~~R~~~  162 (283)
T 3jyo_A          125 AKLDSVVQVGA-GGVGNAVAYALVTHGVQKLQVADLDTS  162 (283)
T ss_dssp             CCCSEEEEECC-SHHHHHHHHHHHHTTCSEEEEECSSHH
T ss_pred             cCCCEEEEECC-cHHHHHHHHHHHHCCCCEEEEEECCHH
Confidence            45689999987 889999999999999757999988754

>3qsg_A NAD-binding phosphogluconate dehydrogenase-like P; structural genomics, PSI-biology, midwest center for structu genomics; 1.90A {Alicyclobacillus acidocaldarius subsp}

Probab=88.65  E-value=0.41  Score=43.84  Aligned_cols=36  Identities=22%  Similarity=0.350  Sum_probs=29.8

Q ss_pred             ccCCeEEEEcCCChhHHHHHHHHHHcCCc-eEEEEecCC
Q 017760            9 IEGKTFLVTGGLGHVGSALCLELVRRGAY-QVRAFDLRT   46 (366)
Q Consensus         9 ~~~~~VlITGgtGfiG~~L~~~L~~~g~~-~V~~~dr~~   46 (366)
                      +.+++|.|. |.|.+|..++..|.+.| + +|++.|+++
T Consensus        22 ~~~~~I~iI-G~G~mG~~~A~~L~~~G-~~~V~~~dr~~   58 (312)
T 3qsg_A           22 SNAMKLGFI-GFGEAASAIASGLRQAG-AIDMAAYDAAS   58 (312)
T ss_dssp             ---CEEEEE-CCSHHHHHHHHHHHHHS-CCEEEEECSSC
T ss_pred             CCCCEEEEE-CccHHHHHHHHHHHHCC-CCeEEEEcCCC
Confidence            346899999 56999999999999999 6 899999873

>3oj0_A Glutr, glutamyl-tRNA reductase; structural genomics, PSI-2, protein structure initiative, MI center for structural genomics, MCSG; HET: MSE SO4; 1.65A {Thermoplasma volcanium}

Probab=88.56  E-value=0.23  Score=39.73  Aligned_cols=35  Identities=17%  Similarity=0.257  Sum_probs=30.7

Q ss_pred             CCeEEEEcCCChhHHHHHHHHHHcCCceEEEEecCCC
Q 017760           11 GKTFLVTGGLGHVGSALCLELVRRGAYQVRAFDLRTN   47 (366)
Q Consensus        11 ~~~VlITGgtGfiG~~L~~~L~~~g~~~V~~~dr~~~   47 (366)
                      +++|+|.|+ |.+|+.+++.|.+.|. +|++.+|++.
T Consensus        21 ~~~v~iiG~-G~iG~~~a~~l~~~g~-~v~v~~r~~~   55 (144)
T 3oj0_A           21 GNKILLVGN-GMLASEIAPYFSYPQY-KVTVAGRNID   55 (144)
T ss_dssp             CCEEEEECC-SHHHHHHGGGCCTTTC-EEEEEESCHH
T ss_pred             CCEEEEECC-CHHHHHHHHHHHhCCC-EEEEEcCCHH
Confidence            689999985 9999999999999996 6999998754

>3b1f_A Putative prephenate dehydrogenase; enzyme, 4-hydroxyphenylpyruvate, oxidative decarboxylation pathway, tyrosine biosynthesis, oxidoreduct; HET: NAD; 2.10A {Streptococcus mutans} PDB: 3dzb_A

Probab=88.56  E-value=0.46  Score=42.74  Aligned_cols=37  Identities=30%  Similarity=0.628  Sum_probs=30.8

Q ss_pred             ccCCeEEEEcCCChhHHHHHHHHHHcC-CceEEEEecCC
Q 017760            9 IEGKTFLVTGGLGHVGSALCLELVRRG-AYQVRAFDLRT   46 (366)
Q Consensus         9 ~~~~~VlITGgtGfiG~~L~~~L~~~g-~~~V~~~dr~~   46 (366)
                      |++++|.|.| +|.+|+.++..|.+.| -++|++.|+++
T Consensus         4 M~~~~I~iIG-~G~mG~~~a~~l~~~g~~~~V~~~d~~~   41 (290)
T 3b1f_A            4 MEEKTIYIAG-LGLIGASLALGIKRDHPHYKIVGYNRSD   41 (290)
T ss_dssp             GCCCEEEEEC-CSHHHHHHHHHHHHHCTTSEEEEECSSH
T ss_pred             cccceEEEEe-eCHHHHHHHHHHHhCCCCcEEEEEcCCH
Confidence            4467999996 9999999999999883 15899998875

>1p77_A Shikimate 5-dehydrogenase; NADPH, oxidoreductase; HET: ATR; 1.95A {Haemophilus influenzae} SCOP: c.2.1.7 c.58.1.5 PDB: 1p74_A*

Probab=88.50  E-value=0.42  Score=42.88  Aligned_cols=37  Identities=14%  Similarity=0.192  Sum_probs=32.2

Q ss_pred             ccCCeEEEEcCCChhHHHHHHHHHHcCCceEEEEecCCC
Q 017760            9 IEGKTFLVTGGLGHVGSALCLELVRRGAYQVRAFDLRTN   47 (366)
Q Consensus         9 ~~~~~VlITGgtGfiG~~L~~~L~~~g~~~V~~~dr~~~   47 (366)
                      .++++++|+|+ |-+|++++..|.+.| .+|++.+|+..
T Consensus       117 ~~~~~vlvlGa-Gg~g~a~a~~L~~~G-~~v~v~~R~~~  153 (272)
T 1p77_A          117 RPNQHVLILGA-GGATKGVLLPLLQAQ-QNIVLANRTFS  153 (272)
T ss_dssp             CTTCEEEEECC-SHHHHTTHHHHHHTT-CEEEEEESSHH
T ss_pred             cCCCEEEEECC-cHHHHHHHHHHHHCC-CEEEEEECCHH
Confidence            45689999998 679999999999999 59999998853

>2ahr_A Putative pyrroline carboxylate reductase; pyrroline reductase, proline biosynthesis, NAD(P protein, rossmann fold, doain swapping; HET: NAP; 2.15A {Streptococcus pyogenes} SCOP: a.100.1.10 c.2.1.6 PDB: 2amf_A

Probab=88.25  E-value=0.44  Score=42.10  Aligned_cols=34  Identities=15%  Similarity=0.131  Sum_probs=30.1

Q ss_pred             CCeEEEEcCCChhHHHHHHHHHHcCCceEEEEecCC
Q 017760           11 GKTFLVTGGLGHVGSALCLELVRRGAYQVRAFDLRT   46 (366)
Q Consensus        11 ~~~VlITGgtGfiG~~L~~~L~~~g~~~V~~~dr~~   46 (366)
                      ||+|.|.| +|.+|+.++..|.+.| ++|.+.|+++
T Consensus         3 ~m~i~iiG-~G~mG~~~a~~l~~~g-~~v~~~~~~~   36 (259)
T 2ahr_A            3 AMKIGIIG-VGKMASAIIKGLKQTP-HELIISGSSL   36 (259)
T ss_dssp             CCEEEEEC-CSHHHHHHHHHHTTSS-CEEEEECSSH
T ss_pred             ccEEEEEC-CCHHHHHHHHHHHhCC-CeEEEECCCH
Confidence            46899997 8999999999999999 5899998875

>3ghy_A Ketopantoate reductase protein; oxidoreductase, NAD-binding domain, PSI-2, NYSGXRC, structur genomics, protein structure initiative; 2.00A {Ralstonia solanacearum}

Probab=88.19  E-value=0.43  Score=44.16  Aligned_cols=34  Identities=21%  Similarity=0.256  Sum_probs=29.8

Q ss_pred             cCCeEEEEcCCChhHHHHHHHHHHcCCceEEEEecC
Q 017760           10 EGKTFLVTGGLGHVGSALCLELVRRGAYQVRAFDLR   45 (366)
Q Consensus        10 ~~~~VlITGgtGfiG~~L~~~L~~~g~~~V~~~dr~   45 (366)
                      ++|+|.|. |+|.+|..++..|.+.| ++|++++|+
T Consensus         2 ~~mkI~Ii-GaG~~G~~~a~~L~~~g-~~V~~~~r~   35 (335)
T 3ghy_A            2 SLTRICIV-GAGAVGGYLGARLALAG-EAINVLARG   35 (335)
T ss_dssp             CCCCEEEE-SCCHHHHHHHHHHHHTT-CCEEEECCH
T ss_pred             CCCEEEEE-CcCHHHHHHHHHHHHCC-CEEEEEECh
Confidence            35789999 56999999999999999 589999985

>2g5c_A Prephenate dehydrogenase; TYRA, oxidoreductase; HET: NAD; 1.90A {Aquifex aeolicus} SCOP: a.100.1.12 c.2.1.6

Probab=88.05  E-value=0.55  Score=42.04  Aligned_cols=34  Identities=24%  Similarity=0.641  Sum_probs=29.7

Q ss_pred             CCeEEEEcCCChhHHHHHHHHHHcCCc--eEEEEecCC
Q 017760           11 GKTFLVTGGLGHVGSALCLELVRRGAY--QVRAFDLRT   46 (366)
Q Consensus        11 ~~~VlITGgtGfiG~~L~~~L~~~g~~--~V~~~dr~~   46 (366)
                      |++|.|.| .|.+|..++..|.+.| +  +|++.|+++
T Consensus         1 m~~I~iIG-~G~mG~~~a~~l~~~g-~~~~V~~~d~~~   36 (281)
T 2g5c_A            1 MQNVLIVG-VGFMGGSFAKSLRRSG-FKGKIYGYDINP   36 (281)
T ss_dssp             CCEEEEES-CSHHHHHHHHHHHHTT-CCSEEEEECSCH
T ss_pred             CcEEEEEe-cCHHHHHHHHHHHhcC-CCcEEEEEeCCH
Confidence            46899996 8999999999999999 5  799998875

>3fbg_A Putative arginate lyase; structural genomics, unknown function, PSI-2, protein structure initiative; 1.60A {Staphylococcus haemolyticus}

Probab=88.01  E-value=0.58  Score=43.36  Aligned_cols=36  Identities=36%  Similarity=0.414  Sum_probs=32.4

Q ss_pred             cCCeEEEEcCCChhHHHHHHHHHHcCCceEEEEecCC
Q 017760           10 EGKTFLVTGGLGHVGSALCLELVRRGAYQVRAFDLRT   46 (366)
Q Consensus        10 ~~~~VlITGgtGfiG~~L~~~L~~~g~~~V~~~dr~~   46 (366)
                      .+.+|+|+||+|-+|...++.+...|. +|+++++++
T Consensus       150 ~g~~VlV~gg~G~vG~~a~qla~~~Ga-~Vi~~~~~~  185 (346)
T 3fbg_A          150 EGKTLLIINGAGGVGSIATQIAKAYGL-RVITTASRN  185 (346)
T ss_dssp             TTCEEEEESTTSHHHHHHHHHHHHTTC-EEEEECCSH
T ss_pred             CCCEEEEEcCCCHHHHHHHHHHHHcCC-EEEEEeCCH
Confidence            568999999999999999999999997 899998754

>3gg2_A Sugar dehydrogenase, UDP-glucose/GDP-mannose dehydrogenase family; structural genomics, oxidoreductase, PSI-2; HET: UGA; 1.70A {Porphyromonas gingivalis}

Probab=88.00  E-value=0.51  Score=45.71  Aligned_cols=33  Identities=27%  Similarity=0.354  Sum_probs=29.9

Q ss_pred             CeEEEEcCCChhHHHHHHHHHHcCCceEEEEecCC
Q 017760           12 KTFLVTGGLGHVGSALCLELVRRGAYQVRAFDLRT   46 (366)
Q Consensus        12 ~~VlITGgtGfiG~~L~~~L~~~g~~~V~~~dr~~   46 (366)
                      |+|.|. |+|++|..++..|.+.| ++|+++|+++
T Consensus         3 mkI~VI-G~G~vG~~lA~~La~~G-~~V~~~D~~~   35 (450)
T 3gg2_A            3 LDIAVV-GIGYVGLVSATCFAELG-ANVRCIDTDR   35 (450)
T ss_dssp             CEEEEE-CCSHHHHHHHHHHHHTT-CEEEEECSCH
T ss_pred             CEEEEE-CcCHHHHHHHHHHHhcC-CEEEEEECCH
Confidence            689998 56999999999999999 5999999985

>3g0o_A 3-hydroxyisobutyrate dehydrogenase; NAD(P), valine catabolism, tartaric acid, target 11128H, NYSGXRC, PSI-2, structural genomics; HET: TLA; 1.80A {Salmonella typhimurium}

Probab=87.96  E-value=0.56  Score=42.65  Aligned_cols=35  Identities=23%  Similarity=0.330  Sum_probs=30.8

Q ss_pred             CCeEEEEcCCChhHHHHHHHHHHcCCceEEEEecCCC
Q 017760           11 GKTFLVTGGLGHVGSALCLELVRRGAYQVRAFDLRTN   47 (366)
Q Consensus        11 ~~~VlITGgtGfiG~~L~~~L~~~g~~~V~~~dr~~~   47 (366)
                      +++|.|. |.|.+|..++..|.+.| ++|++.||++.
T Consensus         7 ~~~I~iI-G~G~mG~~~a~~l~~~G-~~V~~~dr~~~   41 (303)
T 3g0o_A            7 DFHVGIV-GLGSMGMGAARSCLRAG-LSTWGADLNPQ   41 (303)
T ss_dssp             CCEEEEE-CCSHHHHHHHHHHHHTT-CEEEEECSCHH
T ss_pred             CCeEEEE-CCCHHHHHHHHHHHHCC-CeEEEEECCHH
Confidence            4689998 68999999999999999 59999998753

>2f1k_A Prephenate dehydrogenase; tyrosine synthesis, X-RA crystallography structure, oxidoreductase; HET: OMT NAP; 1.55A {Synechocystis SP} SCOP: a.100.1.12 c.2.1.6

Probab=87.89  E-value=0.54  Score=41.96  Aligned_cols=34  Identities=29%  Similarity=0.427  Sum_probs=29.6

Q ss_pred             CeEEEEcCCChhHHHHHHHHHHcCCceEEEEecCCC
Q 017760           12 KTFLVTGGLGHVGSALCLELVRRGAYQVRAFDLRTN   47 (366)
Q Consensus        12 ~~VlITGgtGfiG~~L~~~L~~~g~~~V~~~dr~~~   47 (366)
                      |+|.|.| +|.+|+.++..|.+.| ++|++.|+++.
T Consensus         1 m~i~iiG-~G~~G~~~a~~l~~~g-~~V~~~~~~~~   34 (279)
T 2f1k_A            1 MKIGVVG-LGLIGASLAGDLRRRG-HYLIGVSRQQS   34 (279)
T ss_dssp             CEEEEEC-CSHHHHHHHHHHHHTT-CEEEEECSCHH
T ss_pred             CEEEEEc-CcHHHHHHHHHHHHCC-CEEEEEECCHH
Confidence            4789997 7999999999999999 58999988753

>1vpd_A Tartronate semialdehyde reductase; structural genomics, MCSG, protein structure initiative, PSI, midwest center for structural genomics; HET: MSE TLA; 1.65A {Salmonella typhimurium} SCOP: a.100.1.1 c.2.1.6

Probab=87.88  E-value=0.53  Score=42.46  Aligned_cols=34  Identities=24%  Similarity=0.419  Sum_probs=30.0

Q ss_pred             CeEEEEcCCChhHHHHHHHHHHcCCceEEEEecCCC
Q 017760           12 KTFLVTGGLGHVGSALCLELVRRGAYQVRAFDLRTN   47 (366)
Q Consensus        12 ~~VlITGgtGfiG~~L~~~L~~~g~~~V~~~dr~~~   47 (366)
                      |+|.|.| +|.+|..++..|.+.| ++|.+.|+++.
T Consensus         6 m~i~iiG-~G~~G~~~a~~l~~~g-~~V~~~~~~~~   39 (299)
T 1vpd_A            6 MKVGFIG-LGIMGKPMSKNLLKAG-YSLVVSDRNPE   39 (299)
T ss_dssp             CEEEEEC-CSTTHHHHHHHHHHTT-CEEEEECSCHH
T ss_pred             ceEEEEC-chHHHHHHHHHHHhCC-CEEEEEeCCHH
Confidence            5899997 7999999999999999 58999988753

>3eag_A UDP-N-acetylmuramate:L-alanyl-gamma-D-glutamyl-ME diaminopimelate ligase; UDP-N-acetylmuramate:L-alanyl-G glutamyl-MESO-diaminopimelate ligase; 2.55A {Neisseria meningitidis MC58}

Probab=87.80  E-value=1.2  Score=41.10  Aligned_cols=69  Identities=17%  Similarity=0.119  Sum_probs=45.9

Q ss_pred             CCeEEEEcCCChhHH-HHHHHHHHcCCceEEEEecCCCCcccccccCCCeEEEEccccCCC--CCceEEEEeCC
Q 017760           11 GKTFLVTGGLGHVGS-ALCLELVRRGAYQVRAFDLRTNSPWSHLLINHGVHCIQGLRKNNR--KCLYTCAVRPA   81 (366)
Q Consensus        11 ~~~VlITGgtGfiG~-~L~~~L~~~g~~~V~~~dr~~~~~~~~~~~~~~v~~i~gDks~~~--~~l~~~ilRp~   81 (366)
                      +++|.+.|..| .|. .+++.|.++|+ +|.+.|.+...+....+...++++..|.....-  .+.+.+++=|+
T Consensus         4 ~~~i~~iGiGg-~Gms~~A~~L~~~G~-~V~~~D~~~~~~~~~~L~~~gi~v~~g~~~~~l~~~~~d~vV~Spg   75 (326)
T 3eag_A            4 MKHIHIIGIGG-TFMGGLAAIAKEAGF-EVSGCDAKMYPPMSTQLEALGIDVYEGFDAAQLDEFKADVYVIGNV   75 (326)
T ss_dssp             CCEEEEESCCS-HHHHHHHHHHHHTTC-EEEEEESSCCTTHHHHHHHTTCEEEESCCGGGGGSCCCSEEEECTT
T ss_pred             CcEEEEEEECH-HHHHHHHHHHHhCCC-EEEEEcCCCCcHHHHHHHhCCCEEECCCCHHHcCCCCCCEEEECCC
Confidence            57899996655 565 69999999995 999999987544334455568888877422111  23455555443

>2vhw_A Alanine dehydrogenase; NAD, secreted, oxidoreductase; HET: NAI; 2.0A {Mycobacterium tuberculosis} PDB: 2vhx_A* 2vhy_A 2vhz_A* 2vhv_A* 2voe_A 2voj_A*

Probab=87.72  E-value=0.68  Score=43.69  Aligned_cols=37  Identities=24%  Similarity=0.355  Sum_probs=33.1

Q ss_pred             ccCCeEEEEcCCChhHHHHHHHHHHcCCceEEEEecCCC
Q 017760            9 IEGKTFLVTGGLGHVGSALCLELVRRGAYQVRAFDLRTN   47 (366)
Q Consensus         9 ~~~~~VlITGgtGfiG~~L~~~L~~~g~~~V~~~dr~~~   47 (366)
                      ..+++|+|+|+ |-+|..+++.+...|. +|+++|+++.
T Consensus       166 l~g~~V~ViG~-G~iG~~~a~~a~~~Ga-~V~~~d~~~~  202 (377)
T 2vhw_A          166 VEPADVVVIGA-GTAGYNAARIANGMGA-TVTVLDINID  202 (377)
T ss_dssp             BCCCEEEEECC-SHHHHHHHHHHHHTTC-EEEEEESCHH
T ss_pred             CCCCEEEEECC-CHHHHHHHHHHHhCCC-EEEEEeCCHH
Confidence            56789999998 9999999999999996 8999998753

>1yb4_A Tartronic semialdehyde reductase; structural genomics, oxidoreductase, salmonella typhimurium LT2, PSI, protein ST initiative; 2.40A {Salmonella typhimurium}

Probab=87.67  E-value=0.47  Score=42.69  Aligned_cols=34  Identities=26%  Similarity=0.395  Sum_probs=28.7

Q ss_pred             CCeEEEEcCCChhHHHHHHHHHHcCCceEEEEecCCC
Q 017760           11 GKTFLVTGGLGHVGSALCLELVRRGAYQVRAFDLRTN   47 (366)
Q Consensus        11 ~~~VlITGgtGfiG~~L~~~L~~~g~~~V~~~dr~~~   47 (366)
                      ||+|.|.| .|.+|+.++..|.+.| ++|++.| ++.
T Consensus         3 ~m~i~iiG-~G~~G~~~a~~l~~~g-~~V~~~~-~~~   36 (295)
T 1yb4_A            3 AMKLGFIG-LGIMGSPMAINLARAG-HQLHVTT-IGP   36 (295)
T ss_dssp             -CEEEECC-CSTTHHHHHHHHHHTT-CEEEECC-SSC
T ss_pred             CCEEEEEc-cCHHHHHHHHHHHhCC-CEEEEEc-CHH
Confidence            46899995 7999999999999999 5999888 543

>2cdc_A Glucose dehydrogenase glucose 1-dehydrogenase, DHG-1; reductase, oxidoreductase, MDR family; HET: XYS XYP NAP; 1.50A {Sulfolobus solfataricus} PDB: 2cdb_A* 2cd9_A 2cda_A*

Probab=87.66  E-value=0.57  Score=43.77  Aligned_cols=34  Identities=26%  Similarity=0.374  Sum_probs=31.5

Q ss_pred             CCeEEEEcCCChhHHHHHHHHHHcCCceEEEEecCC
Q 017760           11 GKTFLVTGGLGHVGSALCLELVRRGAYQVRAFDLRT   46 (366)
Q Consensus        11 ~~~VlITGgtGfiG~~L~~~L~~~g~~~V~~~dr~~   46 (366)
                      +.+|+|+|+ |-+|..+++.+...|. +|+++++++
T Consensus       181 g~~VlV~Ga-G~vG~~~~q~a~~~Ga-~Vi~~~~~~  214 (366)
T 2cdc_A          181 CRKVLVVGT-GPIGVLFTLLFRTYGL-EVWMANRRE  214 (366)
T ss_dssp             TCEEEEESC-HHHHHHHHHHHHHHTC-EEEEEESSC
T ss_pred             CCEEEEECC-CHHHHHHHHHHHhCCC-EEEEEeCCc
Confidence            789999999 9999999999999997 899999875

>4ffl_A PYLC; amino acid, biosynthesis of pyrrolysine, isopeptide bond for ATP-grAsp fold, ligase, ATP-binding, L-lysine and 3R-methyl ornithine; HET: LYS ADP ATP; 1.50A {Methanosarcina barkeri} PDB: 4ffm_A* 4ffn_A* 4ffo_A* 4ffp_A* 4ffr_A*

Probab=87.59  E-value=0.75  Score=42.81  Aligned_cols=36  Identities=19%  Similarity=0.116  Sum_probs=31.1

Q ss_pred             CCeEEEEcCCChhHHHHHHHHHHcCCceEEEEecCCCC
Q 017760           11 GKTFLVTGGLGHVGSALCLELVRRGAYQVRAFDLRTNS   48 (366)
Q Consensus        11 ~~~VlITGgtGfiG~~L~~~L~~~g~~~V~~~dr~~~~   48 (366)
                      |+||+|+| +|..|..++..+.+.|+ +|+++|.++..
T Consensus         1 MK~I~ilG-gg~~g~~~~~~Ak~~G~-~vv~vd~~~~~   36 (363)
T 4ffl_A            1 MKTICLVG-GKLQGFEAAYLSKKAGM-KVVLVDKNPQA   36 (363)
T ss_dssp             CCEEEEEC-CSHHHHHHHHHHHHTTC-EEEEEESCTTC
T ss_pred             CCEEEEEC-CCHHHHHHHHHHHHCCC-EEEEEeCCCCC
Confidence            68999997 68999999999999995 89999877643

>3o8q_A Shikimate 5-dehydrogenase I alpha; structural genomics, center for structural genomics of infec diseases, csgid; HET: EPE; 1.45A {Vibrio cholerae biovar el tor} PDB: 3sef_A* 3pgj_A* 3o8q_B*

Probab=87.57  E-value=0.71  Score=41.71  Aligned_cols=38  Identities=16%  Similarity=0.284  Sum_probs=32.5

Q ss_pred             ccCCeEEEEcCCChhHHHHHHHHHHcCCceEEEEecCCC
Q 017760            9 IEGKTFLVTGGLGHVGSALCLELVRRGAYQVRAFDLRTN   47 (366)
Q Consensus         9 ~~~~~VlITGgtGfiG~~L~~~L~~~g~~~V~~~dr~~~   47 (366)
                      ..+++++|+|+ |-+|++++..|.+.|..+|++.+|+..
T Consensus       124 l~~k~vlvlGa-Gg~g~aia~~L~~~G~~~v~v~~R~~~  161 (281)
T 3o8q_A          124 LKGATILLIGA-GGAARGVLKPLLDQQPASITVTNRTFA  161 (281)
T ss_dssp             CTTCEEEEECC-SHHHHHHHHHHHTTCCSEEEEEESSHH
T ss_pred             ccCCEEEEECc-hHHHHHHHHHHHhcCCCeEEEEECCHH
Confidence            45789999987 679999999999999658999998753

>3k5i_A Phosphoribosyl-aminoimidazole carboxylase; purine biosynthesis, ATP-grAsp, lyase; HET: NHE ADP AIR; 2.00A {Aspergillus clavatus} PDB: 3k5h_A*

Probab=87.53  E-value=0.74  Score=43.76  Aligned_cols=37  Identities=30%  Similarity=0.376  Sum_probs=31.1

Q ss_pred             cccCCeEEEEcCCChhHHHHHHHHHHcCCceEEEEecCCC
Q 017760            8 GIEGKTFLVTGGLGHVGSALCLELVRRGAYQVRAFDLRTN   47 (366)
Q Consensus         8 ~~~~~~VlITGgtGfiG~~L~~~L~~~g~~~V~~~dr~~~   47 (366)
                      ||++++|+|.|| |.+|..+++.+.+.|+ +|+++| .+.
T Consensus        21 mm~~~~I~ilGg-G~lg~~l~~aa~~lG~-~v~~~d-~~~   57 (403)
T 3k5i_A           21 MWNSRKVGVLGG-GQLGRMLVESANRLNI-QVNVLD-ADN   57 (403)
T ss_dssp             CCSCCEEEEECC-SHHHHHHHHHHHHHTC-EEEEEE-STT
T ss_pred             CCCCCEEEEECC-CHHHHHHHHHHHHCCC-EEEEEE-CCC
Confidence            345689999965 7999999999999995 899999 543

>4dll_A 2-hydroxy-3-oxopropionate reductase; structural genomics, PSI-biology, NEW YORK structural genomi research consortium, nysgrc, oxidoreductase; 2.11A {Polaromonas SP}

Probab=87.27  E-value=0.66  Score=42.58  Aligned_cols=36  Identities=17%  Similarity=0.402  Sum_probs=31.4

Q ss_pred             cCCeEEEEcCCChhHHHHHHHHHHcCCceEEEEecCCC
Q 017760           10 EGKTFLVTGGLGHVGSALCLELVRRGAYQVRAFDLRTN   47 (366)
Q Consensus        10 ~~~~VlITGgtGfiG~~L~~~L~~~g~~~V~~~dr~~~   47 (366)
                      .+++|.|. |.|.+|..+++.|.+.| ++|++.||++.
T Consensus        30 ~~~~I~iI-G~G~mG~~~a~~l~~~G-~~V~~~dr~~~   65 (320)
T 4dll_A           30 YARKITFL-GTGSMGLPMARRLCEAG-YALQVWNRTPA   65 (320)
T ss_dssp             CCSEEEEE-CCTTTHHHHHHHHHHTT-CEEEEECSCHH
T ss_pred             CCCEEEEE-CccHHHHHHHHHHHhCC-CeEEEEcCCHH
Confidence            45789999 67999999999999999 59999998754

>4h7p_A Malate dehydrogenase; ssgcid, structural G seattle structural genomics center for infectious disease, oxidoreductase; 1.30A {Leishmania major}

Probab=87.24  E-value=0.55  Score=43.83  Aligned_cols=39  Identities=26%  Similarity=0.434  Sum_probs=31.1

Q ss_pred             ccCCeEEEEcCCChhHHHHHHHHHHcCC------ceEEEEecCCC
Q 017760            9 IEGKTFLVTGGLGHVGSALCLELVRRGA------YQVRAFDLRTN   47 (366)
Q Consensus         9 ~~~~~VlITGgtGfiG~~L~~~L~~~g~------~~V~~~dr~~~   47 (366)
                      |+..||.||||+|.||+.|+..|.+...      .++.++|+.+.
T Consensus        22 ~~~vKVaViGAaG~IG~~la~~la~~~l~~~~~~~eL~L~Di~~~   66 (345)
T 4h7p_A           22 MSAVKVAVTGAAGQIGYALVPLIARGALLGPTTPVELRLLDIEPA   66 (345)
T ss_dssp             CCCEEEEEESTTSHHHHHHHHHHHHTTTTCTTCCEEEEEECCGGG
T ss_pred             CCCCEEEEECcCcHHHHHHHHHHHhccccCCCCccEEEEECCCCc
Confidence            4446999999999999999998887542      26899998753

>3pef_A 6-phosphogluconate dehydrogenase, NAD-binding; gamma-hydroxybutyrate dehydrogenase, succinic semialdehyde R geobacter metallireducens; HET: NAP; 2.07A {Geobacter metallireducens}

Probab=87.14  E-value=0.64  Score=41.83  Aligned_cols=35  Identities=31%  Similarity=0.537  Sum_probs=30.6

Q ss_pred             CeEEEEcCCChhHHHHHHHHHHcCCceEEEEecCCCC
Q 017760           12 KTFLVTGGLGHVGSALCLELVRRGAYQVRAFDLRTNS   48 (366)
Q Consensus        12 ~~VlITGgtGfiG~~L~~~L~~~g~~~V~~~dr~~~~   48 (366)
                      |+|.|.| .|.+|..++..|.+.| ++|++.||++..
T Consensus         2 ~~i~iIG-~G~mG~~~a~~l~~~G-~~V~~~dr~~~~   36 (287)
T 3pef_A            2 QKFGFIG-LGIMGSAMAKNLVKAG-CSVTIWNRSPEK   36 (287)
T ss_dssp             CEEEEEC-CSHHHHHHHHHHHHTT-CEEEEECSSGGG
T ss_pred             CEEEEEe-ecHHHHHHHHHHHHCC-CeEEEEcCCHHH
Confidence            6899985 7999999999999999 599999988643

>1a5z_A L-lactate dehydrogenase; oxidoreductase, glycolysis, hyperthermophiles, thermotoga MA protein stability; HET: FBP NAD; 2.10A {Thermotoga maritima} SCOP: c.2.1.5 d.162.1.1

Probab=87.10  E-value=0.58  Score=43.06  Aligned_cols=33  Identities=24%  Similarity=0.488  Sum_probs=29.7

Q ss_pred             CeEEEEcCCChhHHHHHHHHHHcCCc--eEEEEecCC
Q 017760           12 KTFLVTGGLGHVGSALCLELVRRGAY--QVRAFDLRT   46 (366)
Q Consensus        12 ~~VlITGgtGfiG~~L~~~L~~~g~~--~V~~~dr~~   46 (366)
                      |+|.|.|+ |.+|+.++..|.+.| +  +|+++|+++
T Consensus         1 mkI~VIGa-G~~G~~la~~l~~~g-~~~~V~l~D~~~   35 (319)
T 1a5z_A            1 MKIGIVGL-GRVGSSTAFALLMKG-FAREMVLIDVDK   35 (319)
T ss_dssp             CEEEEECC-SHHHHHHHHHHHHHT-CCSEEEEECSSH
T ss_pred             CEEEEECC-CHHHHHHHHHHHhCC-CCCeEEEEeCCh
Confidence            47999987 999999999999998 5  899999875

>1oju_A MDH, malate dehydrogenase; hyperthermophilic, oxidoreductase; HET: ENA; 2.79A {Archaeoglobus fulgidus} PDB: 1ojs_A* 2x0i_A* 2x0j_A*

Probab=86.99  E-value=0.6  Score=42.52  Aligned_cols=35  Identities=17%  Similarity=0.257  Sum_probs=30.3

Q ss_pred             CeEEEEcCCChhHHHHHHHHHHcCC-ceEEEEecCCC
Q 017760           12 KTFLVTGGLGHVGSALCLELVRRGA-YQVRAFDLRTN   47 (366)
Q Consensus        12 ~~VlITGgtGfiG~~L~~~L~~~g~-~~V~~~dr~~~   47 (366)
                      |||.|+|+ |.+|+.++..|.+.|. .+|.++|+++.
T Consensus         1 MkI~ViGa-G~vG~~la~~l~~~~~~~~v~L~D~~~~   36 (294)
T 1oju_A            1 MKLGFVGA-GRVGSTSAFTCLLNLDVDEIALVDIAED   36 (294)
T ss_dssp             CEEEEECC-SHHHHHHHHHHHHHSCCSEEEEECSSHH
T ss_pred             CEEEEECC-CHHHHHHHHHHHhCCCCCeEEEEECChH
Confidence            58999998 9999999999999882 28999999764

>2cvz_A Dehydrogenase, 3-hydroxyisobutyrate dehydrogenase; valine catabolism, NADP+, structural GEN riken structural genomics/proteomics initiative; HET: NDP; 1.80A {Thermus thermophilus} SCOP: a.100.1.1 c.2.1.6 PDB: 1wp4_A*

Probab=86.90  E-value=0.53  Score=42.14  Aligned_cols=34  Identities=18%  Similarity=0.307  Sum_probs=28.6

Q ss_pred             CCeEEEEcCCChhHHHHHHHHHHcCCceEEEEecCCC
Q 017760           11 GKTFLVTGGLGHVGSALCLELVRRGAYQVRAFDLRTN   47 (366)
Q Consensus        11 ~~~VlITGgtGfiG~~L~~~L~~~g~~~V~~~dr~~~   47 (366)
                      |++|.|.| .|.+|+.++..|.+ | ++|++.|+++.
T Consensus         1 M~~i~iiG-~G~~G~~~a~~l~~-g-~~V~~~~~~~~   34 (289)
T 2cvz_A            1 MEKVAFIG-LGAMGYPMAGHLAR-R-FPTLVWNRTFE   34 (289)
T ss_dssp             -CCEEEEC-CSTTHHHHHHHHHT-T-SCEEEECSSTH
T ss_pred             CCeEEEEc-ccHHHHHHHHHHhC-C-CeEEEEeCCHH
Confidence            36799995 69999999999999 9 58999988753

>3q2o_A Phosphoribosylaminoimidazole carboxylase, ATPase; carboxylates, ATP binding, lyase; 1.96A {Bacillus anthracis} PDB: 3qff_A* 3r5h_A*

Probab=86.89  E-value=1.1  Score=42.30  Aligned_cols=38  Identities=26%  Similarity=0.408  Sum_probs=31.9

Q ss_pred             cccCCeEEEEcCCChhHHHHHHHHHHcCCceEEEEecCCC
Q 017760            8 GIEGKTFLVTGGLGHVGSALCLELVRRGAYQVRAFDLRTN   47 (366)
Q Consensus         8 ~~~~~~VlITGgtGfiG~~L~~~L~~~g~~~V~~~dr~~~   47 (366)
                      .+.+++|+|.| +|.+|..+++.+.+.|+ +|+++|.++.
T Consensus        11 ~~~~k~IlIlG-~G~~g~~la~aa~~~G~-~vi~~d~~~~   48 (389)
T 3q2o_A           11 ILPGKTIGIIG-GGQLGRMMALAAKEMGY-KIAVLDPTKN   48 (389)
T ss_dssp             CCTTSEEEEEC-CSHHHHHHHHHHHHTTC-EEEEEESSTT
T ss_pred             CCCCCEEEEEC-CCHHHHHHHHHHHHcCC-EEEEEeCCCC
Confidence            35678999995 67899999999999995 8999987654

>2egg_A AROE, shikimate 5-dehydrogenase; dimer, X-RAY diffraction, structural genomics, NPPSFA; 2.25A {Geobacillus kaustophilus}

Probab=86.85  E-value=0.74  Score=41.91  Aligned_cols=38  Identities=21%  Similarity=0.394  Sum_probs=32.3

Q ss_pred             ccCCeEEEEcCCChhHHHHHHHHHHcCCceEEEEecCCC
Q 017760            9 IEGKTFLVTGGLGHVGSALCLELVRRGAYQVRAFDLRTN   47 (366)
Q Consensus         9 ~~~~~VlITGgtGfiG~~L~~~L~~~g~~~V~~~dr~~~   47 (366)
                      ..+++++|+|+ |-+|+.++..|.+.|..+|++.+|+..
T Consensus       139 l~~~~vlVlGa-Gg~g~aia~~L~~~G~~~V~v~nR~~~  176 (297)
T 2egg_A          139 LDGKRILVIGA-GGGARGIYFSLLSTAAERIDMANRTVE  176 (297)
T ss_dssp             CTTCEEEEECC-SHHHHHHHHHHHTTTCSEEEEECSSHH
T ss_pred             CCCCEEEEECc-HHHHHHHHHHHHHCCCCEEEEEeCCHH
Confidence            45689999987 679999999999999658999988753

>1vkn_A N-acetyl-gamma-glutamyl-phosphate reductase; TM1782, structu genomics, JCSG, PSI, protein structure initiative, joint CE structural genomics; 1.80A {Thermotoga maritima} SCOP: c.2.1.3 d.81.1.1

Probab=86.84  E-value=0.83  Score=42.66  Aligned_cols=36  Identities=17%  Similarity=0.102  Sum_probs=29.8

Q ss_pred             cCCeEEEEcCCChhHHHHHHHHHHcCCceEEEEecC
Q 017760           10 EGKTFLVTGGLGHVGSALCLELVRRGAYQVRAFDLR   45 (366)
Q Consensus        10 ~~~~VlITGgtGfiG~~L~~~L~~~g~~~V~~~dr~   45 (366)
                      .|.+|.|.||||++|..|++.|.+...-++..+.-+
T Consensus        12 ~~~~V~IvGAtG~vG~ellrlL~~hP~~el~~l~S~   47 (351)
T 1vkn_A           12 HMIRAGIIGATGYTGLELVRLLKNHPEAKITYLSSR   47 (351)
T ss_dssp             CCEEEEEESTTSHHHHHHHHHHHHCTTEEEEEEECS
T ss_pred             ceeEEEEECCCCHHHHHHHHHHHcCCCcEEEEEeCc
Confidence            357899999999999999999999865577776543

>2o3j_A UDP-glucose 6-dehydrogenase; structural genomics, PSI-2, prote structure initiative, NEW YORK SGX research center for STRU genomics; 1.88A {Caenorhabditis elegans}

Probab=86.84  E-value=0.7  Score=45.12  Aligned_cols=35  Identities=23%  Similarity=0.433  Sum_probs=30.5

Q ss_pred             cCCeEEEEcCCChhHHHHHHHHHHc--CCceEEEEecCC
Q 017760           10 EGKTFLVTGGLGHVGSALCLELVRR--GAYQVRAFDLRT   46 (366)
Q Consensus        10 ~~~~VlITGgtGfiG~~L~~~L~~~--g~~~V~~~dr~~   46 (366)
                      ++|+|.|. |+|++|..++..|.+.  | ++|+++|+++
T Consensus         8 ~~mkI~VI-G~G~vG~~~A~~La~~g~g-~~V~~~D~~~   44 (481)
T 2o3j_A            8 KVSKVVCV-GAGYVGGPTCAMIAHKCPH-ITVTVVDMNT   44 (481)
T ss_dssp             CCCEEEEE-CCSTTHHHHHHHHHHHCTT-SEEEEECSCH
T ss_pred             CCCEEEEE-CCCHHHHHHHHHHHhcCCC-CEEEEEECCH
Confidence            35789999 6799999999999998  6 5999999875

>3p2o_A Bifunctional protein fold; structural genomics, center for structural genomics of infec diseases, csgid, alpha-beta-alpha sandwich; HET: NAD; 2.23A {Campylobacter jejuni subsp}

Probab=86.72  E-value=1  Score=40.67  Aligned_cols=37  Identities=30%  Similarity=0.513  Sum_probs=33.4

Q ss_pred             ccCCeEEEEcCCChhHHHHHHHHHHcCCceEEEEecCC
Q 017760            9 IEGKTFLVTGGLGHVGSALCLELVRRGAYQVRAFDLRT   46 (366)
Q Consensus         9 ~~~~~VlITGgtGfiG~~L~~~L~~~g~~~V~~~dr~~   46 (366)
                      ..+++++|.|++|.+|+.++..|.+.|. +|+...++.
T Consensus       158 l~Gk~vvVvGrs~iVG~p~A~lL~~~gA-tVtv~h~~t  194 (285)
T 3p2o_A          158 LEGKDAVIIGASNIVGRPMATMLLNAGA-TVSVCHIKT  194 (285)
T ss_dssp             CTTCEEEEECCCTTTHHHHHHHHHHTTC-EEEEECTTC
T ss_pred             CCCCEEEEECCCchHHHHHHHHHHHCCC-eEEEEeCCc
Confidence            5689999999999999999999999997 899997654

>1nvt_A Shikimate 5'-dehydrogenase; structural genomics, PSI, protein structure initiative; HET: NAP; 2.35A {Methanocaldococcus jannaschii} SCOP: c.2.1.7 c.58.1.5

Probab=86.21  E-value=0.66  Score=41.91  Aligned_cols=35  Identities=14%  Similarity=0.279  Sum_probs=30.8

Q ss_pred             ccCCeEEEEcCCChhHHHHHHHHHHcCCceEEEEecCC
Q 017760            9 IEGKTFLVTGGLGHVGSALCLELVRRGAYQVRAFDLRT   46 (366)
Q Consensus         9 ~~~~~VlITGgtGfiG~~L~~~L~~~g~~~V~~~dr~~   46 (366)
                      .++++++|||++ -+|++++..|.+.|  +|++.+|+.
T Consensus       126 l~~k~vlV~GaG-giG~aia~~L~~~G--~V~v~~r~~  160 (287)
T 1nvt_A          126 VKDKNIVIYGAG-GAARAVAFELAKDN--NIIIANRTV  160 (287)
T ss_dssp             CCSCEEEEECCS-HHHHHHHHHHTSSS--EEEEECSSH
T ss_pred             cCCCEEEEECch-HHHHHHHHHHHHCC--CEEEEECCH
Confidence            456899999985 99999999999999  799998875

>4gbj_A 6-phosphogluconate dehydrogenase NAD-binding; structural genomics, PSI-biology, midwest center for structu genomics, MCSG; 2.05A {Dyadobacter fermentans}

Probab=86.12  E-value=0.7  Score=42.06  Aligned_cols=36  Identities=19%  Similarity=0.493  Sum_probs=26.7

Q ss_pred             CeEEEEcCCChhHHHHHHHHHHcCCceEEEEecCCCCc
Q 017760           12 KTFLVTGGLGHVGSALCLELVRRGAYQVRAFDLRTNSP   49 (366)
Q Consensus        12 ~~VlITGgtGfiG~~L~~~L~~~g~~~V~~~dr~~~~~   49 (366)
                      +||-+. |.|.+|..+++.|++.| |+|+++||++...
T Consensus         6 ~kIgfI-GLG~MG~~mA~~L~~~G-~~V~v~dr~~~~~   41 (297)
T 4gbj_A            6 EKIAFL-GLGNLGTPIAEILLEAG-YELVVWNRTASKA   41 (297)
T ss_dssp             CEEEEE-CCSTTHHHHHHHHHHTT-CEEEEC-------
T ss_pred             CcEEEE-ecHHHHHHHHHHHHHCC-CeEEEEeCCHHHH
Confidence            579888 78999999999999999 5999999987543

>3hn7_A UDP-N-acetylmuramate-L-alanine ligase; ATP-binding, nucleotide-binding, structural genomics, joint for structural genomics, JCSG; HET: MSE; 1.65A {Psychrobacter arcticus 273-4}

Probab=86.09  E-value=1.4  Score=43.55  Aligned_cols=77  Identities=23%  Similarity=0.177  Sum_probs=48.0

Q ss_pred             cccccccCCeEEEEcCCChhHHHHHHHHHHcCCceEEEEecCCCCcccccccCCCeEEEEccccCC-CCCceEEEEeCC
Q 017760            4 SENEGIEGKTFLVTGGLGHVGSALCLELVRRGAYQVRAFDLRTNSPWSHLLINHGVHCIQGLRKNN-RKCLYTCAVRPA   81 (366)
Q Consensus         4 ~~~~~~~~~~VlITGgtGfiG~~L~~~L~~~g~~~V~~~dr~~~~~~~~~~~~~~v~~i~gDks~~-~~~l~~~ilRp~   81 (366)
                      -++-..+.++|.+.|..|-=-+.+++.|.++|+ +|.+.|.+..++....+...++++..|..... ..+.+.+++=|+
T Consensus        12 ~~~~~~~~~~i~~iGiGg~Gms~lA~~l~~~G~-~V~~sD~~~~~~~~~~L~~~gi~~~~G~~~~~~~~~~d~vV~Spg   89 (524)
T 3hn7_A           12 HENLYFQGMHIHILGICGTFMGSLALLARALGH-TVTGSDANIYPPMSTQLEQAGVTIEEGYLIAHLQPAPDLVVVGNA   89 (524)
T ss_dssp             -------CCEEEEETTTSHHHHHHHHHHHHTTC-EEEEEESCCCTTHHHHHHHTTCEEEESCCGGGGCSCCSEEEECTT
T ss_pred             ccceeecCCEEEEEEecHhhHHHHHHHHHhCCC-EEEEECCCCCcHHHHHHHHCCCEEECCCCHHHcCCCCCEEEECCC
Confidence            345556778999998877666679999999995 99999998654433445556888887742211 123445554443

>3pwz_A Shikimate dehydrogenase 3; alpha-beta, oxidoreductase; 1.71A {Pseudomonas putida}

Probab=86.09  E-value=0.93  Score=40.73  Aligned_cols=38  Identities=13%  Similarity=0.246  Sum_probs=32.3

Q ss_pred             ccCCeEEEEcCCChhHHHHHHHHHHcCCceEEEEecCCC
Q 017760            9 IEGKTFLVTGGLGHVGSALCLELVRRGAYQVRAFDLRTN   47 (366)
Q Consensus         9 ~~~~~VlITGgtGfiG~~L~~~L~~~g~~~V~~~dr~~~   47 (366)
                      ..+++++|+|+ |-.|++++..|.+.|..+|++.+|+..
T Consensus       118 l~~k~~lvlGa-Gg~~~aia~~L~~~G~~~v~i~~R~~~  155 (272)
T 3pwz_A          118 LRNRRVLLLGA-GGAVRGALLPFLQAGPSELVIANRDMA  155 (272)
T ss_dssp             CTTSEEEEECC-SHHHHHHHHHHHHTCCSEEEEECSCHH
T ss_pred             ccCCEEEEECc-cHHHHHHHHHHHHcCCCEEEEEeCCHH
Confidence            45789999987 779999999999999658999988753

>3i83_A 2-dehydropantoate 2-reductase; structural genomics, oxidoreductase, NADP, pantothenate BIOS PSI-2, protein structure initiative; 1.90A {Methylococcus capsulatus}

Probab=86.06  E-value=0.8  Score=41.99  Aligned_cols=33  Identities=27%  Similarity=0.315  Sum_probs=29.9

Q ss_pred             CeEEEEcCCChhHHHHHHHHHHcCCceEEEEecCC
Q 017760           12 KTFLVTGGLGHVGSALCLELVRRGAYQVRAFDLRT   46 (366)
Q Consensus        12 ~~VlITGgtGfiG~~L~~~L~~~g~~~V~~~dr~~   46 (366)
                      |+|.|. |+|-+|..++..|.+.| ++|+.++|++
T Consensus         3 mkI~Ii-GaGaiG~~~a~~L~~~g-~~V~~~~r~~   35 (320)
T 3i83_A            3 LNILVI-GTGAIGSFYGALLAKTG-HCVSVVSRSD   35 (320)
T ss_dssp             CEEEEE-SCCHHHHHHHHHHHHTT-CEEEEECSTT
T ss_pred             CEEEEE-CcCHHHHHHHHHHHhCC-CeEEEEeCCh
Confidence            689999 67999999999999999 5999999875

>2gcg_A Glyoxylate reductase/hydroxypyruvate reductase; NAD(P) rossmann fold, formate/glycerate dehydrogenase substr binding domain, oxidoreductase; HET: NDP; 2.20A {Homo sapiens} PDB: 2wwr_A 2h1s_A 2q50_A

Probab=86.05  E-value=0.94  Score=41.87  Aligned_cols=37  Identities=27%  Similarity=0.360  Sum_probs=32.2

Q ss_pred             ccCCeEEEEcCCChhHHHHHHHHHHcCCceEEEEecCCC
Q 017760            9 IEGKTFLVTGGLGHVGSALCLELVRRGAYQVRAFDLRTN   47 (366)
Q Consensus         9 ~~~~~VlITGgtGfiG~~L~~~L~~~g~~~V~~~dr~~~   47 (366)
                      ..+++|.|.| .|.+|+.+++.|...|. +|++.|++..
T Consensus       153 l~g~~vgIIG-~G~iG~~iA~~l~~~G~-~V~~~d~~~~  189 (330)
T 2gcg_A          153 LTQSTVGIIG-LGRIGQAIARRLKPFGV-QRFLYTGRQP  189 (330)
T ss_dssp             CTTCEEEEEC-CSHHHHHHHHHHGGGTC-CEEEEESSSC
T ss_pred             CCCCEEEEEC-cCHHHHHHHHHHHHCCC-EEEEECCCCc
Confidence            5578999996 59999999999999995 8999998764

>1txg_A Glycerol-3-phosphate dehydrogenase [NAD(P)+]; oxidoreductase; 1.70A {Archaeoglobus fulgidus} SCOP: a.100.1.6 c.2.1.6

Probab=86.02  E-value=0.66  Score=42.51  Aligned_cols=31  Identities=35%  Similarity=0.551  Sum_probs=27.9

Q ss_pred             CeEEEEcCCChhHHHHHHHHHHcCCceEEEEec
Q 017760           12 KTFLVTGGLGHVGSALCLELVRRGAYQVRAFDL   44 (366)
Q Consensus        12 ~~VlITGgtGfiG~~L~~~L~~~g~~~V~~~dr   44 (366)
                      |+|.|.| .|.+|+.++..|.+.| ++|+++++
T Consensus         1 m~I~iiG-~G~mG~~~a~~L~~~g-~~V~~~~r   31 (335)
T 1txg_A            1 MIVSILG-AGAMGSALSVPLVDNG-NEVRIWGT   31 (335)
T ss_dssp             CEEEEES-CCHHHHHHHHHHHHHC-CEEEEECC
T ss_pred             CEEEEEC-cCHHHHHHHHHHHhCC-CeEEEEEc
Confidence            4789996 5999999999999999 59999998

>4a26_A Putative C-1-tetrahydrofolate synthase, cytoplasm; oxidoreductase, hydrolase, leishmaniasis; 2.70A {Leishmania major}

Probab=85.98  E-value=1.1  Score=40.77  Aligned_cols=37  Identities=27%  Similarity=0.352  Sum_probs=33.4

Q ss_pred             ccCCeEEEEcCCChhHHHHHHHHHHcCCceEEEEecCC
Q 017760            9 IEGKTFLVTGGLGHVGSALCLELVRRGAYQVRAFDLRT   46 (366)
Q Consensus         9 ~~~~~VlITGgtGfiG~~L~~~L~~~g~~~V~~~dr~~   46 (366)
                      ..+++++|.|.+|-+|+.++..|.+.|. +|+.++++.
T Consensus       163 l~Gk~vvVIG~s~iVG~p~A~lL~~~gA-tVtv~~~~T  199 (300)
T 4a26_A          163 MAGKRAVVLGRSNIVGAPVAALLMKENA-TVTIVHSGT  199 (300)
T ss_dssp             CTTCEEEEECCCTTTHHHHHHHHHHTTC-EEEEECTTS
T ss_pred             CCCCEEEEECCCchHHHHHHHHHHHCCC-eEEEEeCCC
Confidence            5689999999999999999999999996 899998754

>4ezb_A Uncharacterized conserved protein; structural genomics, protein structure initiative, NEW YORK structural genomix research consortium; 2.10A {Sinorhizobium meliloti}

Probab=85.95  E-value=0.71  Score=42.39  Aligned_cols=34  Identities=29%  Similarity=0.419  Sum_probs=30.6

Q ss_pred             CCeEEEEcCCChhHHHHHHHHHHcC-CceEEEEecCC
Q 017760           11 GKTFLVTGGLGHVGSALCLELVRRG-AYQVRAFDLRT   46 (366)
Q Consensus        11 ~~~VlITGgtGfiG~~L~~~L~~~g-~~~V~~~dr~~   46 (366)
                      +++|.|.| +|.+|..++..|.+.| . +|++.|+++
T Consensus        24 ~m~IgvIG-~G~mG~~lA~~L~~~G~~-~V~~~dr~~   58 (317)
T 4ezb_A           24 MTTIAFIG-FGEAAQSIAGGLGGRNAA-RLAAYDLRF   58 (317)
T ss_dssp             CCEEEEEC-CSHHHHHHHHHHHTTTCS-EEEEECGGG
T ss_pred             CCeEEEEC-ccHHHHHHHHHHHHcCCC-eEEEEeCCC
Confidence            46899995 8999999999999999 6 899999986

>3dfu_A Uncharacterized protein from 6-phosphogluconate dehydrogenase-like family; putative rossmann-like dehydrogenase, structural genomics; HET: MSE; 2.07A {Corynebacterium glutamicum}

Probab=85.85  E-value=0.37  Score=42.33  Aligned_cols=34  Identities=12%  Similarity=-0.009  Sum_probs=29.7

Q ss_pred             cCCeEEEEcCCChhHHHHHHHHHHcCCceEEEEecC
Q 017760           10 EGKTFLVTGGLGHVGSALCLELVRRGAYQVRAFDLR   45 (366)
Q Consensus        10 ~~~~VlITGgtGfiG~~L~~~L~~~g~~~V~~~dr~   45 (366)
                      ..|+|.|.| .|.+|..++..|.+.| ++|++.++.
T Consensus         5 ~~mkI~IIG-~G~~G~sLA~~L~~~G-~~V~~~~~~   38 (232)
T 3dfu_A            5 PRLRVGIFD-DGSSTVNMAEKLDSVG-HYVTVLHAP   38 (232)
T ss_dssp             CCCEEEEEC-CSCCCSCHHHHHHHTT-CEEEECSSG
T ss_pred             CCcEEEEEe-eCHHHHHHHHHHHHCC-CEEEEecCH
Confidence            457899995 6999999999999999 599999874

>3vku_A L-LDH, L-lactate dehydrogenase; rossmann fold, NADH binding, oxidoreductase; 1.96A {Lactobacillus casei} PDB: 2zqz_A 2zqy_A 3vkv_A* 1llc_A*

Probab=85.81  E-value=0.83  Score=42.24  Aligned_cols=37  Identities=22%  Similarity=0.442  Sum_probs=31.4

Q ss_pred             ccCCeEEEEcCCChhHHHHHHHHHHcCC-ceEEEEecCC
Q 017760            9 IEGKTFLVTGGLGHVGSALCLELVRRGA-YQVRAFDLRT   46 (366)
Q Consensus         9 ~~~~~VlITGgtGfiG~~L~~~L~~~g~-~~V~~~dr~~   46 (366)
                      ..++||.|+|+ |.+|+.++..|...|. .+++++|+++
T Consensus         7 ~~~~kV~ViGa-G~vG~~~a~~l~~~~~~~el~l~D~~~   44 (326)
T 3vku_A            7 KDHQKVILVGD-GAVGSSYAYAMVLQGIAQEIGIVDIFK   44 (326)
T ss_dssp             CCCCEEEEECC-SHHHHHHHHHHHHHTCCSEEEEECSCH
T ss_pred             CCCCEEEEECC-CHHHHHHHHHHHhCCCCCeEEEEeCCh
Confidence            34579999995 9999999999999874 4899999864

>3tz6_A Aspartate-semialdehyde dehydrogenase; asadh, ASD, ASA, amino-acid biosynthesis, diaminopimelate biosynthesis, lysine biosynthesis; HET: SO4; 1.95A {Mycobacterium tuberculosis} PDB: 3vos_A* 3kub_A 3llg_A

Probab=85.81  E-value=1.1  Score=41.72  Aligned_cols=33  Identities=30%  Similarity=0.370  Sum_probs=26.1

Q ss_pred             CeEEEEcCCChhHHHHHHHHHHcC--CceEEEEec
Q 017760           12 KTFLVTGGLGHVGSALCLELVRRG--AYQVRAFDL   44 (366)
Q Consensus        12 ~~VlITGgtGfiG~~L~~~L~~~g--~~~V~~~dr   44 (366)
                      ++|.|.|+||++|..|++.|.++.  .-++..+.-
T Consensus         2 ~~VaIvGatG~vG~el~~lL~~h~fp~~el~~~~s   36 (344)
T 3tz6_A            2 LSIGIVGATGQVGQVMRTLLDERDFPASAVRFFAS   36 (344)
T ss_dssp             EEEEEETTTSHHHHHHHHHHHHTTCCEEEEEEEEC
T ss_pred             CEEEEECCCChHHHHHHHHHHhCCCCceEEEEEEC
Confidence            589999999999999999998873  124666643

>3obb_A Probable 3-hydroxyisobutyrate dehydrogenase; structural genomics, PSI-2, protein structure initiative, MI center for structural genomics; HET: EPE; 2.20A {Pseudomonas aeruginosa} PDB: 3q3c_A*

Probab=85.81  E-value=0.72  Score=42.09  Aligned_cols=36  Identities=33%  Similarity=0.672  Sum_probs=31.4

Q ss_pred             cCCeEEEEcCCChhHHHHHHHHHHcCCceEEEEecCCC
Q 017760           10 EGKTFLVTGGLGHVGSALCLELVRRGAYQVRAFDLRTN   47 (366)
Q Consensus        10 ~~~~VlITGgtGfiG~~L~~~L~~~g~~~V~~~dr~~~   47 (366)
                      .|+||-+. |.|.+|..+++.|++.| |+|++.||++.
T Consensus         2 ~M~kIgfI-GlG~MG~~mA~~L~~~G-~~v~v~dr~~~   37 (300)
T 3obb_A            2 HMKQIAFI-GLGHMGAPMATNLLKAG-YLLNVFDLVQS   37 (300)
T ss_dssp             -CCEEEEE-CCSTTHHHHHHHHHHTT-CEEEEECSSHH
T ss_pred             CcCEEEEe-eehHHHHHHHHHHHhCC-CeEEEEcCCHH
Confidence            36789888 79999999999999999 59999999864

>3ond_A Adenosylhomocysteinase; plant protein, enzyme-substrate complex, NAD cofactor, regul SAM-dependent methylation reactions; HET: NAD ADN; 1.17A {Lupinus luteus} PDB: 3one_A* 3onf_A*

Probab=85.78  E-value=0.75  Score=44.87  Aligned_cols=37  Identities=30%  Similarity=0.350  Sum_probs=32.3

Q ss_pred             cccCCeEEEEcCCChhHHHHHHHHHHcCCceEEEEecCC
Q 017760            8 GIEGKTFLVTGGLGHVGSALCLELVRRGAYQVRAFDLRT   46 (366)
Q Consensus         8 ~~~~~~VlITGgtGfiG~~L~~~L~~~g~~~V~~~dr~~   46 (366)
                      ...+++++|||++ -+|..+++.|...|. +|++.|+++
T Consensus       262 ~L~GKtVvVtGaG-gIG~aiA~~Laa~GA-~Viv~D~~~  298 (488)
T 3ond_A          262 MIAGKVAVVAGYG-DVGKGCAAALKQAGA-RVIVTEIDP  298 (488)
T ss_dssp             CCTTCEEEEECCS-HHHHHHHHHHHHTTC-EEEEECSCH
T ss_pred             cccCCEEEEECCC-HHHHHHHHHHHHCCC-EEEEEcCCH
Confidence            3568999999875 999999999999997 899998865

>2x0j_A Malate dehydrogenase; oxidoreductase, hyperthermophilic, tricarboxylic acid cycle; HET: ENA; 2.79A {Archaeoglobus fulgidus dsm 4304} PDB: 2x0i_A*

Probab=85.76  E-value=0.81  Score=41.66  Aligned_cols=34  Identities=18%  Similarity=0.230  Sum_probs=29.5

Q ss_pred             CeEEEEcCCChhHHHHHHHHHHcC-CceEEEEecCC
Q 017760           12 KTFLVTGGLGHVGSALCLELVRRG-AYQVRAFDLRT   46 (366)
Q Consensus        12 ~~VlITGgtGfiG~~L~~~L~~~g-~~~V~~~dr~~   46 (366)
                      |||.|+| +|.+|+.++..|..++ ..++.++|+++
T Consensus         1 MKV~IiG-aG~VG~~~a~~l~~~~~~~el~L~Di~~   35 (294)
T 2x0j_A            1 MKLGFVG-AGRVGSTSAFTCLLNLDVDEIALVDIAE   35 (294)
T ss_dssp             CEEEEEC-CSHHHHHHHHHHHHHSCCSEEEEECSSH
T ss_pred             CEEEEEC-cCHHHHHHHHHHHhCCCCCEEEEEeCCC
Confidence            6899999 5999999999998876 36899999875

>1tt7_A YHFP; alcohol dehydrogenase, Zn-dependent, NAD, structural genomics, protein structure initiative, PSI; 2.70A {Bacillus subtilis} SCOP: b.35.1.2 c.2.1.1 PDB: 1y9e_A*

Probab=85.76  E-value=0.81  Score=41.95  Aligned_cols=34  Identities=35%  Similarity=0.383  Sum_probs=30.8

Q ss_pred             eEEEEcCCChhHHHHHHHHHHcCCceEEEEecCCC
Q 017760           13 TFLVTGGLGHVGSALCLELVRRGAYQVRAFDLRTN   47 (366)
Q Consensus        13 ~VlITGgtGfiG~~L~~~L~~~g~~~V~~~dr~~~   47 (366)
                      +|+|+||+|-+|...++.+...|. +|+++++++.
T Consensus       153 ~VlV~Ga~G~vG~~~~q~a~~~Ga-~vi~~~~~~~  186 (330)
T 1tt7_A          153 SVLVTGATGGVGGIAVSMLNKRGY-DVVASTGNRE  186 (330)
T ss_dssp             CEEEESTTSHHHHHHHHHHHHHTC-CEEEEESSSS
T ss_pred             eEEEECCCCHHHHHHHHHHHHCCC-EEEEEeCCHH
Confidence            799999999999999999999996 7999998754

>4ggo_A Trans-2-enoyl-COA reductase; rossmann fold, oxidoreductase; 2.00A {Treponema denticola atcc 35405} PDB: 4ggp_A

Probab=85.75  E-value=1.5  Score=41.54  Aligned_cols=55  Identities=18%  Similarity=0.062  Sum_probs=40.2

Q ss_pred             cCCeEEEEcCCChhHHHHHHHHH-HcCCceEEEEecCCCCcccc----------------cccCCCeEEEEcc
Q 017760           10 EGKTFLVTGGLGHVGSALCLELV-RRGAYQVRAFDLRTNSPWSH----------------LLINHGVHCIQGL   65 (366)
Q Consensus        10 ~~~~VlITGgtGfiG~~L~~~L~-~~g~~~V~~~dr~~~~~~~~----------------~~~~~~v~~i~gD   65 (366)
                      ..+++||||||.-+|.+.+..|. +.|. .|+++.+........                .........+.+|
T Consensus        49 ~pK~vLVtGaSsGiGlA~AialAf~~GA-~vi~v~~~~~~~~~~~atag~~~~~a~~~~i~~~G~~a~~i~~D  120 (401)
T 4ggo_A           49 APKNVLVLGCSNGYGLASRITAAFGYGA-ATIGVSFEKAGSETKYGTPGWYNNLAFDEAAKREGLYSVTIDGD  120 (401)
T ss_dssp             CCCEEEEESCSSHHHHHHHHHHHHHHCC-EEEEEECCCCCCSSSCCCHHHHHHHHHHHHHHHHTCCEEEEESC
T ss_pred             CCCEEEEECCCCcHHHHHHHHHHhhCCC-CEEEEecCCcccccccccccchhHHHHHHHHHHcCCCceeEeCC
Confidence            35899999999999999999988 5685 788887765433211                1113567888999

>3ngx_A Bifunctional protein fold; methylenetetrahydrofolate dehydrogenase/cyclohydrolase; 2.30A {Thermoplasma acidophilum} PDB: 3ngl_A

Probab=85.67  E-value=1.2  Score=39.93  Aligned_cols=37  Identities=22%  Similarity=0.252  Sum_probs=33.4

Q ss_pred             ccCCeEEEEcCCChhHHHHHHHHHHcCCceEEEEecCC
Q 017760            9 IEGKTFLVTGGLGHVGSALCLELVRRGAYQVRAFDLRT   46 (366)
Q Consensus         9 ~~~~~VlITGgtGfiG~~L~~~L~~~g~~~V~~~dr~~   46 (366)
                      ..+++++|.|+++-+|+.++..|.+.|. +|+...++.
T Consensus       148 l~Gk~vvVvG~s~iVG~plA~lL~~~gA-tVtv~~~~t  184 (276)
T 3ngx_A          148 YHENTVTIVNRSPVVGRPLSMMLLNRNY-TVSVCHSKT  184 (276)
T ss_dssp             CCSCEEEEECCCTTTHHHHHHHHHHTTC-EEEEECTTC
T ss_pred             cCCCEEEEEcCChHHHHHHHHHHHHCCC-eEEEEeCCc
Confidence            6789999999999999999999999996 899997654

>3mog_A Probable 3-hydroxybutyryl-COA dehydrogenase; structural genomics, PSI, protein structure initiative, NYSG oxidoreductase; 2.20A {Escherichia coli}

Probab=85.66  E-value=0.7  Score=45.17  Aligned_cols=35  Identities=26%  Similarity=0.400  Sum_probs=30.5

Q ss_pred             cCCeEEEEcCCChhHHHHHHHHHHcCCceEEEEecCC
Q 017760           10 EGKTFLVTGGLGHVGSALCLELVRRGAYQVRAFDLRT   46 (366)
Q Consensus        10 ~~~~VlITGgtGfiG~~L~~~L~~~g~~~V~~~dr~~   46 (366)
                      +.++|.|. |+|.+|..++..|.+.| ++|++.|+++
T Consensus         4 ~~~kVgVI-GaG~MG~~IA~~la~aG-~~V~l~D~~~   38 (483)
T 3mog_A            4 NVQTVAVI-GSGTMGAGIAEVAASHG-HQVLLYDISA   38 (483)
T ss_dssp             CCCCEEEE-CCSHHHHHHHHHHHHTT-CCEEEECSCH
T ss_pred             CCCEEEEE-CcCHHHHHHHHHHHHCC-CeEEEEECCH
Confidence            45689998 55999999999999999 5899999875

>1pjc_A Protein (L-alanine dehydrogenase); oxidoreductase, NAD; HET: NAD; 2.00A {Phormidium lapideum} SCOP: c.2.1.4 c.23.12.2 PDB: 1pjb_A* 1say_A

Probab=85.65  E-value=1  Score=42.12  Aligned_cols=37  Identities=32%  Similarity=0.545  Sum_probs=32.7

Q ss_pred             ccCCeEEEEcCCChhHHHHHHHHHHcCCceEEEEecCCC
Q 017760            9 IEGKTFLVTGGLGHVGSALCLELVRRGAYQVRAFDLRTN   47 (366)
Q Consensus         9 ~~~~~VlITGgtGfiG~~L~~~L~~~g~~~V~~~dr~~~   47 (366)
                      ...++|+|+|+ |-+|..+++.+...|. +|+++|+++.
T Consensus       165 l~~~~VlViGa-GgvG~~aa~~a~~~Ga-~V~v~dr~~~  201 (361)
T 1pjc_A          165 VKPGKVVILGG-GVVGTEAAKMAVGLGA-QVQIFDINVE  201 (361)
T ss_dssp             BCCCEEEEECC-SHHHHHHHHHHHHTTC-EEEEEESCHH
T ss_pred             CCCCEEEEECC-CHHHHHHHHHHHhCCC-EEEEEeCCHH
Confidence            44589999998 9999999999999997 8999998753

>2y0c_A BCEC, UDP-glucose dehydrogenase; oxidoreductase, carbohydrate synthesis, exopolysaccharide, C fibrosis; HET: UGA; 1.75A {Burkholderia cepacia} PDB: 2y0d_A* 2y0e_A*

Probab=85.57  E-value=0.83  Score=44.60  Aligned_cols=34  Identities=24%  Similarity=0.293  Sum_probs=30.5

Q ss_pred             CCeEEEEcCCChhHHHHHHHHHHcCCceEEEEecCC
Q 017760           11 GKTFLVTGGLGHVGSALCLELVRRGAYQVRAFDLRT   46 (366)
Q Consensus        11 ~~~VlITGgtGfiG~~L~~~L~~~g~~~V~~~dr~~   46 (366)
                      .|+|.|. |+|++|..++..|.+.| ++|+++|+++
T Consensus         8 ~~~I~VI-G~G~vG~~lA~~la~~G-~~V~~~d~~~   41 (478)
T 2y0c_A            8 SMNLTII-GSGSVGLVTGACLADIG-HDVFCLDVDQ   41 (478)
T ss_dssp             CCEEEEE-CCSHHHHHHHHHHHHTT-CEEEEECSCH
T ss_pred             CceEEEE-CcCHHHHHHHHHHHhCC-CEEEEEECCH
Confidence            3689888 78999999999999999 5999999875

>3d1l_A Putative NADP oxidoreductase BF3122; structural genomics, PSI-2, protein structure initiative, M center for structural genomics, MCSG; 2.19A {Bacteroides fragilis}

Probab=85.49  E-value=0.71  Score=40.90  Aligned_cols=34  Identities=21%  Similarity=0.484  Sum_probs=29.3

Q ss_pred             CCeEEEEcCCChhHHHHHHHHHHcCCce-EEEEecCC
Q 017760           11 GKTFLVTGGLGHVGSALCLELVRRGAYQ-VRAFDLRT   46 (366)
Q Consensus        11 ~~~VlITGgtGfiG~~L~~~L~~~g~~~-V~~~dr~~   46 (366)
                      +++|.|.|+ |.+|+.++..|.+.|. + |.+.|+++
T Consensus        10 ~m~i~iiG~-G~mG~~~a~~l~~~g~-~~v~~~~~~~   44 (266)
T 3d1l_A           10 DTPIVLIGA-GNLATNLAKALYRKGF-RIVQVYSRTE   44 (266)
T ss_dssp             GCCEEEECC-SHHHHHHHHHHHHHTC-CEEEEECSSH
T ss_pred             CCeEEEEcC-CHHHHHHHHHHHHCCC-eEEEEEeCCH
Confidence            468999975 9999999999999994 7 88888765

>4a0s_A Octenoyl-COA reductase/carboxylase; oxidoreductase, transferase, cinnabaramide PKS biosynthesis; HET: CO8 NAP; 1.90A {Streptomyces SP} PDB: 4a10_A

Probab=85.47  E-value=0.78  Score=44.12  Aligned_cols=37  Identities=22%  Similarity=0.176  Sum_probs=32.2

Q ss_pred             ccCCeEEEEcCCChhHHHHHHHHHHcCCceEEEEecCC
Q 017760            9 IEGKTFLVTGGLGHVGSALCLELVRRGAYQVRAFDLRT   46 (366)
Q Consensus         9 ~~~~~VlITGgtGfiG~~L~~~L~~~g~~~V~~~dr~~   46 (366)
                      ..+.+|+|+||+|-+|...++.+...|. +|+++++++
T Consensus       219 ~~g~~VlV~GasG~iG~~a~qla~~~Ga-~vi~~~~~~  255 (447)
T 4a0s_A          219 KQGDIVLIWGASGGLGSYAIQFVKNGGG-IPVAVVSSA  255 (447)
T ss_dssp             CTTCEEEETTTTSHHHHHHHHHHHHTTC-EEEEEESSH
T ss_pred             CCCCEEEEECCCCHHHHHHHHHHHHcCC-EEEEEeCCH
Confidence            3568999999999999999999999996 899888643

>3pi7_A NADH oxidoreductase; groes-like fold, NAD(P)-binding rossmann fold, structural GE joint center for structural genomics, JCSG; HET: MSE; 1.71A {Mesorhizobium loti}

Probab=85.43  E-value=0.71  Score=42.79  Aligned_cols=35  Identities=17%  Similarity=0.148  Sum_probs=31.5

Q ss_pred             CeEEEEcCCChhHHHHHHHHHHcCCceEEEEecCCC
Q 017760           12 KTFLVTGGLGHVGSALCLELVRRGAYQVRAFDLRTN   47 (366)
Q Consensus        12 ~~VlITGgtGfiG~~L~~~L~~~g~~~V~~~dr~~~   47 (366)
                      ++|+|+||+|-+|...++.+...|. +|+++++++.
T Consensus       166 ~~vli~gg~g~vG~~a~qla~~~Ga-~Vi~~~~~~~  200 (349)
T 3pi7_A          166 KAFVMTAGASQLCKLIIGLAKEEGF-RPIVTVRRDE  200 (349)
T ss_dssp             SEEEESSTTSHHHHHHHHHHHHHTC-EEEEEESCGG
T ss_pred             CEEEEeCCCcHHHHHHHHHHHHCCC-EEEEEeCCHH
Confidence            6899999999999999999999997 8999987653

>3orq_A N5-carboxyaminoimidazole ribonucleotide synthetas; ATP-grAsp superfamily, ligase,biosynthetic protein; HET: MSE ADP; 2.23A {Staphylococcus aureus subsp} PDB: 3orr_A

Probab=85.38  E-value=1.5  Score=41.19  Aligned_cols=38  Identities=21%  Similarity=0.296  Sum_probs=32.0

Q ss_pred             ccCCeEEEEcCCChhHHHHHHHHHHcCCceEEEEecCCCC
Q 017760            9 IEGKTFLVTGGLGHVGSALCLELVRRGAYQVRAFDLRTNS   48 (366)
Q Consensus         9 ~~~~~VlITGgtGfiG~~L~~~L~~~g~~~V~~~dr~~~~   48 (366)
                      +++++|+|.| +|.+|+.+++.+.+.|+ +|+++|..+..
T Consensus        10 ~~~~~IlIlG-~G~lg~~la~aa~~lG~-~viv~d~~~~~   47 (377)
T 3orq_A           10 KFGATIGIIG-GGQLGKMMAQSAQKMGY-KVVVLDPSEDC   47 (377)
T ss_dssp             CTTCEEEEEC-CSHHHHHHHHHHHHTTC-EEEEEESCTTC
T ss_pred             CCCCEEEEEC-CCHHHHHHHHHHHHCCC-EEEEEECCCCC
Confidence            4578999995 67899999999999995 89999876543

>3t4e_A Quinate/shikimate dehydrogenase; structural genomics, center for structural genomics of infec diseases, csgid; HET: NAD; 1.95A {Salmonella enterica subsp} PDB: 1npd_A* 1o9b_A* 1vi2_A*

Probab=85.38  E-value=1.1  Score=41.02  Aligned_cols=37  Identities=22%  Similarity=0.486  Sum_probs=32.2

Q ss_pred             ccCCeEEEEcCCChhHHHHHHHHHHcCCceEEEEecCC
Q 017760            9 IEGKTFLVTGGLGHVGSALCLELVRRGAYQVRAFDLRT   46 (366)
Q Consensus         9 ~~~~~VlITGgtGfiG~~L~~~L~~~g~~~V~~~dr~~   46 (366)
                      ..+++++|+|+ |-.|++++..|.+.|..+|++.+|++
T Consensus       146 l~gk~~lVlGA-GGaaraia~~L~~~G~~~v~v~nRt~  182 (312)
T 3t4e_A          146 MRGKTMVLLGA-GGAATAIGAQAAIEGIKEIKLFNRKD  182 (312)
T ss_dssp             CTTCEEEEECC-SHHHHHHHHHHHHTTCSEEEEEECSS
T ss_pred             cCCCEEEEECc-CHHHHHHHHHHHHcCCCEEEEEECCC
Confidence            45689999987 78899999999999976899998884

>1xa0_A Putative NADPH dependent oxidoreductases; structural genomics, protein structure initiative, MCSG; HET: DTY; 2.80A {Geobacillus stearothermophilus} SCOP: b.35.1.2 c.2.1.1

Probab=85.37  E-value=0.71  Score=42.31  Aligned_cols=34  Identities=38%  Similarity=0.439  Sum_probs=30.8

Q ss_pred             eEEEEcCCChhHHHHHHHHHHcCCceEEEEecCCC
Q 017760           13 TFLVTGGLGHVGSALCLELVRRGAYQVRAFDLRTN   47 (366)
Q Consensus        13 ~VlITGgtGfiG~~L~~~L~~~g~~~V~~~dr~~~   47 (366)
                      +|+|+|++|-+|...++.+...|. +|+++++++.
T Consensus       152 ~VlV~Ga~G~vG~~~~q~a~~~Ga-~vi~~~~~~~  185 (328)
T 1xa0_A          152 PVLVTGATGGVGSLAVSMLAKRGY-TVEASTGKAA  185 (328)
T ss_dssp             CEEESSTTSHHHHHHHHHHHHTTC-CEEEEESCTT
T ss_pred             eEEEecCCCHHHHHHHHHHHHCCC-EEEEEECCHH
Confidence            799999999999999999999996 7999988754

>1dlj_A UDP-glucose dehydrogenase; rossmann fold, ternary complex, crystallographic dimer, oxidoreductase; HET: NAI UGA; 1.80A {Streptococcus pyogenes} SCOP: a.100.1.4 c.2.1.6 c.26.3.1 PDB: 1dli_A*

Probab=85.19  E-value=0.7  Score=43.98  Aligned_cols=32  Identities=28%  Similarity=0.308  Sum_probs=28.2

Q ss_pred             CeEEEEcCCChhHHHHHHHHHHcCCceEEEEecCC
Q 017760           12 KTFLVTGGLGHVGSALCLELVRRGAYQVRAFDLRT   46 (366)
Q Consensus        12 ~~VlITGgtGfiG~~L~~~L~~~g~~~V~~~dr~~   46 (366)
                      |+|.|.| +|++|..++..|.+ | ++|+++|+++
T Consensus         1 MkI~VIG-~G~vG~~~A~~La~-G-~~V~~~d~~~   32 (402)
T 1dlj_A            1 MKIAVAG-SGYVGLSLGVLLSL-Q-NEVTIVDILP   32 (402)
T ss_dssp             CEEEEEC-CSHHHHHHHHHHTT-T-SEEEEECSCH
T ss_pred             CEEEEEC-CCHHHHHHHHHHhC-C-CEEEEEECCH
Confidence            4788885 59999999999999 9 6999999875

>3nep_X Malate dehydrogenase; halophIle, molecular adpatation, NAD, oxidoreductase, tricarboxylic acid cycle; 1.55A {Salinibacter ruber}

Probab=85.15  E-value=0.88  Score=41.82  Aligned_cols=77  Identities=16%  Similarity=0.210  Sum_probs=43.4

Q ss_pred             CeEEEEcCCChhHHHHHHHHHHcCC-ceEEEEecCCCCccc--cccc------CCCeEEEEccccCCCCCceEEEEeCCc
Q 017760           12 KTFLVTGGLGHVGSALCLELVRRGA-YQVRAFDLRTNSPWS--HLLI------NHGVHCIQGLRKNNRKCLYTCAVRPAA   82 (366)
Q Consensus        12 ~~VlITGgtGfiG~~L~~~L~~~g~-~~V~~~dr~~~~~~~--~~~~------~~~v~~i~gDks~~~~~l~~~ilRp~~   82 (366)
                      |||.|+|+ |.+|+.++..|...|. .+|+++|+++.....  .++.      ..+.+..-.|....-.+-+.+++=.+.
T Consensus         1 Mkv~ViGa-G~vG~~~a~~l~~~~~~~el~l~D~~~~k~~g~a~DL~~~~~~~~~~~~v~~~~~~~a~~~aDvVii~ag~   79 (314)
T 3nep_X            1 MKVTVIGA-GNVGATVAECVARQDVAKEVVMVDIKDGMPQGKALDMRESSPIHGFDTRVTGTNDYGPTEDSDVCIITAGL   79 (314)
T ss_dssp             CEEEEECC-SHHHHHHHHHHHHHTCSSEEEEECSSTTHHHHHHHHHHHHHHHHTCCCEEEEESSSGGGTTCSEEEECCCC
T ss_pred             CEEEEECC-CHHHHHHHHHHHhCCCCCEEEEEeCchHHHHHHHHHHhccccccCCCcEEEECCCHHHhCCCCEEEECCCC
Confidence            58999996 9999999999998873 489999998743211  0111      123333322322233345667765555


Q ss_pred             cccCCCC
Q 017760           83 IYGPGEE   89 (366)
Q Consensus        83 iyGp~~~   89 (366)
                      -+.||..
T Consensus        80 ~~kpG~~   86 (314)
T 3nep_X           80 PRSPGMS   86 (314)
T ss_dssp             -------
T ss_pred             CCCCCCC
Confidence            5566654

>3gt0_A Pyrroline-5-carboxylate reductase; structural genomics, PSI-2, protein structure initiative, no structural genomics consortium, NESG; 2.00A {Bacillus cereus atcc 14579}

Probab=85.14  E-value=0.82  Score=40.12  Aligned_cols=35  Identities=26%  Similarity=0.357  Sum_probs=29.8

Q ss_pred             CeEEEEcCCChhHHHHHHHHHHcCC---ceEEEEecCCC
Q 017760           12 KTFLVTGGLGHVGSALCLELVRRGA---YQVRAFDLRTN   47 (366)
Q Consensus        12 ~~VlITGgtGfiG~~L~~~L~~~g~---~~V~~~dr~~~   47 (366)
                      ++|.|.| .|.+|+.+++.|.+.|.   ++|++.||++.
T Consensus         3 ~~i~iIG-~G~mG~~~a~~l~~~g~~~~~~V~~~~r~~~   40 (247)
T 3gt0_A            3 KQIGFIG-CGNMGMAMIGGMINKNIVSSNQIICSDLNTA   40 (247)
T ss_dssp             CCEEEEC-CSHHHHHHHHHHHHTTSSCGGGEEEECSCHH
T ss_pred             CeEEEEC-ccHHHHHHHHHHHhCCCCCCCeEEEEeCCHH
Confidence            6899985 99999999999999993   18999988753

>1zud_1 Adenylyltransferase THIF; thiamin, thiazole, protein-protein complex, THIF, TRAN biosynthetic protein complex; 1.98A {Escherichia coli} PDB: 1zfn_A* 1zkm_A

Probab=85.02  E-value=0.69  Score=41.01  Aligned_cols=37  Identities=22%  Similarity=0.217  Sum_probs=31.5

Q ss_pred             ccCCeEEEEcCCChhHHHHHHHHHHcCCceEEEEecCC
Q 017760            9 IEGKTFLVTGGLGHVGSALCLELVRRGAYQVRAFDLRT   46 (366)
Q Consensus         9 ~~~~~VlITGgtGfiG~~L~~~L~~~g~~~V~~~dr~~   46 (366)
                      ....+|+|.|++| +|+.+++.|...|..+++++|...
T Consensus        26 l~~~~VlvvG~Gg-lG~~va~~La~~Gvg~i~lvD~d~   62 (251)
T 1zud_1           26 LLDSQVLIIGLGG-LGTPAALYLAGAGVGTLVLADDDD   62 (251)
T ss_dssp             HHTCEEEEECCST-THHHHHHHHHHTTCSEEEEECCCB
T ss_pred             HhcCcEEEEccCH-HHHHHHHHHHHcCCCeEEEEeCCC
Confidence            4568999998755 999999999999987899998764

>2gf2_A Hibadh, 3-hydroxyisobutyrate dehydrogenase; structural genomics, structural genomics consortium, SGC, oxidoreductase; 2.38A {Homo sapiens} PDB: 2i9p_A*

Probab=84.91  E-value=0.84  Score=41.04  Aligned_cols=34  Identities=24%  Similarity=0.552  Sum_probs=29.3

Q ss_pred             CeEEEEcCCChhHHHHHHHHHHcCCceEEEEecCCC
Q 017760           12 KTFLVTGGLGHVGSALCLELVRRGAYQVRAFDLRTN   47 (366)
Q Consensus        12 ~~VlITGgtGfiG~~L~~~L~~~g~~~V~~~dr~~~   47 (366)
                      |+|.|.| .|.+|+.++..|.+.| ++|++.|+++.
T Consensus         1 m~i~iiG-~G~mG~~~a~~l~~~g-~~V~~~~~~~~   34 (296)
T 2gf2_A            1 MPVGFIG-LGNMGNPMAKNLMKHG-YPLIIYDVFPD   34 (296)
T ss_dssp             CCEEEEC-CSTTHHHHHHHHHHTT-CCEEEECSSTH
T ss_pred             CeEEEEe-ccHHHHHHHHHHHHCC-CEEEEEeCCHH
Confidence            4688885 7999999999999999 58999988753

>4gwg_A 6-phosphogluconate dehydrogenase, decarboxylating; 6-phosphoglyconate dehydrogenase, NADP, oxido; HET: MES; 1.39A {Homo sapiens} PDB: 4gwk_A* 2jkv_A* 2pgd_A 1pgo_A* 1pgp_A* 1pgq_A* 1pgn_A

Probab=84.78  E-value=0.79  Score=44.80  Aligned_cols=36  Identities=25%  Similarity=0.436  Sum_probs=31.7

Q ss_pred             cCCeEEEEcCCChhHHHHHHHHHHcCCceEEEEecCCC
Q 017760           10 EGKTFLVTGGLGHVGSALCLELVRRGAYQVRAFDLRTN   47 (366)
Q Consensus        10 ~~~~VlITGgtGfiG~~L~~~L~~~g~~~V~~~dr~~~   47 (366)
                      .+++|.|.| .|.+|.+++..|.+.| ++|++.||++.
T Consensus         3 ~~~kIgiIG-lG~MG~~lA~~L~~~G-~~V~v~dr~~~   38 (484)
T 4gwg_A            3 AQADIALIG-LAVMGQNLILNMNDHG-FVVCAFNRTVS   38 (484)
T ss_dssp             CCBSEEEEC-CSHHHHHHHHHHHHTT-CCEEEECSSTH
T ss_pred             CCCEEEEEC-hhHHHHHHHHHHHHCC-CEEEEEeCCHH
Confidence            457899995 7999999999999999 59999998864

>2o7s_A DHQ-SDH PR, bifunctional 3-dehydroquinate dehydratase/shikima dehydrogenase; shikimate, NADPH, dehydroshikimate, bifunctional enzyme; HET: DHK TLA NAP; 1.78A {Arabidopsis thaliana} PDB: 2o7q_A* 2gpt_A*

Probab=84.76  E-value=0.63  Score=45.96  Aligned_cols=36  Identities=31%  Similarity=0.424  Sum_probs=28.5

Q ss_pred             ccCCeEEEEcCCChhHHHHHHHHHHcCCceEEEEecCC
Q 017760            9 IEGKTFLVTGGLGHVGSALCLELVRRGAYQVRAFDLRT   46 (366)
Q Consensus         9 ~~~~~VlITGgtGfiG~~L~~~L~~~g~~~V~~~dr~~   46 (366)
                      +++++++|||| |-+|++++..|.+.|. +|++.+|+.
T Consensus       362 l~~k~vlV~Ga-GGig~aia~~L~~~G~-~V~i~~R~~  397 (523)
T 2o7s_A          362 LASKTVVVIGA-GGAGKALAYGAKEKGA-KVVIANRTY  397 (523)
T ss_dssp             ----CEEEECC-SHHHHHHHHHHHHHCC--CEEEESSH
T ss_pred             cCCCEEEEECC-cHHHHHHHHHHHHCCC-EEEEEECCH
Confidence            45678999999 6999999999999996 899998874

>1leh_A Leucine dehydrogenase; oxidoreductase; 2.20A {Lysinibacillus sphaericus} SCOP: c.2.1.7 c.58.1.1

Probab=84.72  E-value=1.2  Score=41.88  Aligned_cols=37  Identities=38%  Similarity=0.629  Sum_probs=31.5

Q ss_pred             cccCCeEEEEcCCChhHHHHHHHHHHcCCceEEEEecCC
Q 017760            8 GIEGKTFLVTGGLGHVGSALCLELVRRGAYQVRAFDLRT   46 (366)
Q Consensus         8 ~~~~~~VlITGgtGfiG~~L~~~L~~~g~~~V~~~dr~~   46 (366)
                      ...+++|+|.| .|-+|+++++.|.+.|. +|++.|++.
T Consensus       170 ~L~GktV~V~G-~G~VG~~~A~~L~~~Ga-kVvv~D~~~  206 (364)
T 1leh_A          170 SLEGLAVSVQG-LGNVAKALCKKLNTEGA-KLVVTDVNK  206 (364)
T ss_dssp             CCTTCEEEEEC-CSHHHHHHHHHHHHTTC-EEEEECSCH
T ss_pred             CCCcCEEEEEC-chHHHHHHHHHHHHCCC-EEEEEcCCH
Confidence            35678999996 59999999999999996 899888654

>1p9o_A Phosphopantothenoylcysteine synthetase; ligase; 2.30A {Homo sapiens} SCOP: c.72.3.1

Probab=84.59  E-value=1.1  Score=41.20  Aligned_cols=37  Identities=24%  Similarity=0.340  Sum_probs=30.8

Q ss_pred             cCCe-EEEEcC-C-----------------ChhHHHHHHHHHHcCCceEEEEecCCC
Q 017760           10 EGKT-FLVTGG-L-----------------GHVGSALCLELVRRGAYQVRAFDLRTN   47 (366)
Q Consensus        10 ~~~~-VlITGg-t-----------------GfiG~~L~~~L~~~g~~~V~~~dr~~~   47 (366)
                      .+++ |+||+| |                 |-.|.+++++++++|+ +|+.+.+..+
T Consensus        35 ~gk~~VLITaGgT~EpID~DpVRfItN~SSGkmG~aiAe~~~~~Ga-~V~lv~g~~s   90 (313)
T 1p9o_A           35 QGRRVVLVTSGGTKVPLEARPVRFLDNFSSGRRGATSAEAFLAAGY-GVLFLYRARS   90 (313)
T ss_dssp             TTCCEEEEEESBCEEESSSSCSEEEEECCCCHHHHHHHHHHHHTTC-EEEEEEETTS
T ss_pred             cCCeEEEEeCCCcccccCCCceeEecCCCCcHHHHHHHHHHHHCCC-EEEEEecCCC
Confidence            4566 999855 4                 8999999999999996 8999987643

>1kjq_A GART 2, phosphoribosylglycinamide formyltransferase 2, 5'-; ATP-grAsp, purine biosynthesis, nucleotide; HET: ADP MPO; 1.05A {Escherichia coli} SCOP: b.84.2.1 c.30.1.1 d.142.1.2 PDB: 1kj9_A* 1kji_A* 1kjj_A* 1kj8_A* 1eyz_A* 1ez1_A*

Probab=84.56  E-value=1.5  Score=41.15  Aligned_cols=39  Identities=23%  Similarity=0.406  Sum_probs=32.3

Q ss_pred             cccCCeEEEEcCCChhHHHHHHHHHHcCCceEEEEecCCCC
Q 017760            8 GIEGKTFLVTGGLGHVGSALCLELVRRGAYQVRAFDLRTNS   48 (366)
Q Consensus         8 ~~~~~~VlITGgtGfiG~~L~~~L~~~g~~~V~~~dr~~~~   48 (366)
                      ..++++|+|+|+ |..|..+++.+.+.|+ +|+.+|..+..
T Consensus         8 ~~~~~~ili~g~-g~~~~~~~~a~~~~G~-~v~~~~~~~~~   46 (391)
T 1kjq_A            8 RPAATRVMLLGS-GELGKEVAIECQRLGV-EVIAVDRYADA   46 (391)
T ss_dssp             STTCCEEEEESC-SHHHHHHHHHHHTTTC-EEEEEESSTTC
T ss_pred             CCCCCEEEEECC-CHHHHHHHHHHHHcCC-EEEEEECCCCC
Confidence            345689999976 7899999999999995 89999877543

>4a5o_A Bifunctional protein fold; oxidoreductase, hydrolase; 2.20A {Pseudomonas aeruginosa PAO1}

Probab=84.48  E-value=1.5  Score=39.55  Aligned_cols=37  Identities=30%  Similarity=0.368  Sum_probs=33.1

Q ss_pred             ccCCeEEEEcCCChhHHHHHHHHHHcCCceEEEEecCC
Q 017760            9 IEGKTFLVTGGLGHVGSALCLELVRRGAYQVRAFDLRT   46 (366)
Q Consensus         9 ~~~~~VlITGgtGfiG~~L~~~L~~~g~~~V~~~dr~~   46 (366)
                      ..+++++|.|.+|.+|+.++..|.+.|. +|+...++.
T Consensus       159 l~Gk~vvVvGrs~iVG~plA~lL~~~gA-tVtv~hs~T  195 (286)
T 4a5o_A          159 LYGMDAVVVGASNIVGRPMALELLLGGC-TVTVTHRFT  195 (286)
T ss_dssp             CTTCEEEEECTTSTTHHHHHHHHHHTTC-EEEEECTTC
T ss_pred             CCCCEEEEECCCchhHHHHHHHHHHCCC-eEEEEeCCC
Confidence            5689999999999999999999999996 899987654

---

Homologous Structure Domains

Structure Domains Detected by RPS-BLAST

Original result of RPS-BLAST against SCOP70(version1.75) database

ID	Length	Definition	E-value
Query	366
d1kewa_	361	c.2.1.2 (A:) dTDP-glucose 4,6-dehydratase (RmlB) {	1e-07
d1kewa_	361	c.2.1.2 (A:) dTDP-glucose 4,6-dehydratase (RmlB) {	4e-05
d1r6da_	322	c.2.1.2 (A:) dTDP-glucose 4,6-dehydratase (RmlB) {	2e-07
d1r6da_	322	c.2.1.2 (A:) dTDP-glucose 4,6-dehydratase (RmlB) {	0.004
d1db3a_	357	c.2.1.2 (A:) GDP-mannose 4,6-dehydratase {Escheric	1e-06
d1db3a_	357	c.2.1.2 (A:) GDP-mannose 4,6-dehydratase {Escheric	2e-05
d1y1pa1	342	c.2.1.2 (A:2-343) Aldehyde reductase II {Sporobolo	1e-06
d2blla1	342	c.2.1.2 (A:316-657) Polymyxin resistance protein A	2e-06
d1rpna_	321	c.2.1.2 (A:) GDP-mannose 4,6-dehydratase {Pseudomo	3e-06
d1rpna_	321	c.2.1.2 (A:) GDP-mannose 4,6-dehydratase {Pseudomo	0.002
d1rkxa_	356	c.2.1.2 (A:) CDP-glucose-4,6-dehydratase {Yersinia	3e-06
d1sb8a_	341	c.2.1.2 (A:) UDP-N-acetylglucosamine 4-epimerase W	8e-06
d1z45a2	347	c.2.1.2 (A:11-357) Uridine diphosphogalactose-4-ep	2e-05
d2c5aa1	363	c.2.1.2 (A:13-375) GDP-mannose-3', 5'-epimerase {T	2e-05
d1t2aa_	347	c.2.1.2 (A:) GDP-mannose 4,6-dehydratase {Human (H	2e-05
d1xgka_	350	c.2.1.2 (A:) Negative transcriptional regulator Nm	2e-05
d1i24a_	393	c.2.1.2 (A:) Sulfolipid biosynthesis protein SQD1	4e-05
d1hdoa_	205	c.2.1.2 (A:) Biliverdin IX beta reductase {Human (	4e-05
d1ek6a_	346	c.2.1.2 (A:) Uridine diphosphogalactose-4-epimeras	4e-05
d1eq2a_	307	c.2.1.2 (A:) ADP-L-glycero-D-mannoheptose 6-epimer	5e-05
d2b69a1	312	c.2.1.2 (A:4-315) UDP-glucuronate decarboxylase 1	6e-05
d2b69a1	312	c.2.1.2 (A:4-315) UDP-glucuronate decarboxylase 1	1e-04
d1n7ha_	339	c.2.1.2 (A:) GDP-mannose 4,6-dehydratase {Thale-cr	8e-05
d2q46a1	252	c.2.1.2 (A:2-253) Hypothetical protein At5g02240 (	8e-05
d1udca_	338	c.2.1.2 (A:) Uridine diphosphogalactose-4-epimeras	2e-04
d1gy8a_	383	c.2.1.2 (A:) Uridine diphosphogalactose-4-epimeras	2e-04
d1oc2a_	346	c.2.1.2 (A:) dTDP-glucose 4,6-dehydratase (RmlB) {	6e-04
d1qyca_	307	c.2.1.2 (A:) Phenylcoumaran benzylic ether reducta	6e-04
d1orra_	338	c.2.1.2 (A:) CDP-tyvelose-2-epimerase {Salmonella	6e-04
d2bkaa1	232	c.2.1.2 (A:5-236) TAT-interacting protein TIP30 {H	7e-04
d1e6ua_	315	c.2.1.2 (A:) GDP-4-keto-6-deoxy-d-mannose epimeras	8e-04
d1qyda_	312	c.2.1.2 (A:) Pinoresinol-lariciresinol reductase {	0.001
d2a35a1	212	c.2.1.2 (A:4-215) Hypothetical protein PA4017 {Pse	0.002
d1o5ia_	234	c.2.1.2 (A:) beta-keto acyl carrier protein reduct	0.002
d1dhra_	236	c.2.1.2 (A:) Dihydropteridin reductase (pteridine	0.003
d1fmca_	255	c.2.1.2 (A:) 7-alpha-hydroxysteroid dehydrogenase	0.003

>d1kewa_ c.2.1.2 (A:) dTDP-glucose 4,6-dehydratase (RmlB) {Streptococcus suis, serotype 2 [TaxId: 1307]} Length = 361

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Tyrosine-dependent oxidoreductases
domain: dTDP-glucose 4,6-dehydratase (RmlB)
species: Streptococcus suis, serotype 2 [TaxId: 1307]

 Score = 50.5 bits (120), Expect = 1e-07
 Identities = 29/192 (15%), Positives = 55/192 (28%), Gaps = 43/192 (22%)

Query: 73  LYTCAVRPAAIYGPGE--ERHLPRIVSLAKLGLVPFKIGEPSVKTDWIYVDNLVLALILA 130
           L T     +  YGP    E+ +P ++  A  G      G+     DW+YV++   AL + 
Sbjct: 187 LPTIVTNCSNNYGPYHFPEKLIPLVILNALEGKPLPIYGKGDQIRDWLYVEDHARALHMV 246

Query: 131 SMGLLDDIPGQKGRPIASGQPYFVSDGFPINTFEFIGPLLKTLDYDLPKSWLAVPHALFL 190
                      +G+    G+ Y +         +                          
Sbjct: 247 V---------TEGKA---GETYNIGGHNEKKNLD-------------------------- 268

Query: 191 GKVFSFFYSVLYPWLNRWWLPQPLILPAEVYKVGVTHYF-SLLKAKDELCYVPIVSPREG 249
             V      +L   + +    +  I            Y     K   EL + P+ +   G
Sbjct: 269 --VVFTICDLLDEIVPKATSYREQITYVADRPGHDRRYAIDAGKISRELGWKPLETFESG 326

Query: 250 MAATISYWQDRK 261
           +  T+ ++    
Sbjct: 327 IRKTVEWYLANT 338

>d1kewa_ c.2.1.2 (A:) dTDP-glucose 4,6-dehydratase (RmlB) {Streptococcus suis, serotype 2 [TaxId: 1307]} Length = 361

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Tyrosine-dependent oxidoreductases
domain: dTDP-glucose 4,6-dehydratase (RmlB)
species: Streptococcus suis, serotype 2 [TaxId: 1307]

 Score = 42.8 bits (100), Expect = 4e-05
 Identities = 12/54 (22%), Positives = 23/54 (42%), Gaps = 4/54 (7%)

Query: 15 LVTGGLGHVGSALCLELVRRGAYQVRAFDLRTNSPW----SHLLINHGVHCIQG 64
          L+TGG G +GSA+   +++     V   D  T +      S +  ++  +    
Sbjct: 4  LITGGAGFIGSAVVRHIIKNTQDTVVNIDKLTYAGNLESLSDISESNRYNFEHA 57

>d1r6da_ c.2.1.2 (A:) dTDP-glucose 4,6-dehydratase (RmlB) {Streptomyces venezuelae [TaxId: 54571]} Length = 322

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Tyrosine-dependent oxidoreductases
domain: dTDP-glucose 4,6-dehydratase (RmlB)
species: Streptomyces venezuelae [TaxId: 54571]

 Score = 50.2 bits (119), Expect = 2e-07
 Identities = 34/191 (17%), Positives = 60/191 (31%), Gaps = 48/191 (25%)

Query: 73  LYTCAVRPAAIYGPGE--ERHLPRIVSLAKLGLVPFKIGEPSVKTDWIYVDNLVLALILA 130
           L     R    YGP +  E+ +P  V+    G      G+ +   +W++ D+    + L 
Sbjct: 171 LDVRITRCCNNYGPYQHPEKLIPLFVTNLLDGGTLPLYGDGANVREWVHTDDHCRGIALV 230

Query: 131 SMGLLDDIPGQKGRPIASGQPYFVSDGFPINTFEFIGPLLKTLDYDLPKSWLAVPHALFL 190
                       GR    G+ Y +  G  +   E  G LL +L  D              
Sbjct: 231 ---------LAGGRA---GEIYHIGGGLELTNRELTGILLDSLGADWSSVRKVADR---- 274

Query: 191 GKVFSFFYSVLYPWLNRWWLPQPLILPAEVYKVGVTHYFSLLKAKDELCYVPIVSPREGM 250
                                          +    +     K + EL Y P VS  +G+
Sbjct: 275 --------------------------KGHDLR----YSLDGGKIERELGYRPQVSFADGL 304

Query: 251 AATISYWQDRK 261
           A T+ ++++ +
Sbjct: 305 ARTVRWYRENR 315

>d1r6da_ c.2.1.2 (A:) dTDP-glucose 4,6-dehydratase (RmlB) {Streptomyces venezuelae [TaxId: 54571]} Length = 322

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Tyrosine-dependent oxidoreductases
domain: dTDP-glucose 4,6-dehydratase (RmlB)
species: Streptomyces venezuelae [TaxId: 54571]

 Score = 36.3 bits (83), Expect = 0.004
 Identities = 14/71 (19%), Positives = 26/71 (36%), Gaps = 9/71 (12%)

Query: 15 LVTGGLGHVGSALCLELVRRG-----AYQVRAFDLRTNSPW----SHLLINHGVHCIQGL 65
          LVTGG G +GS    +L+        A +V   D  T +      + +  +  +  + G 
Sbjct: 4  LVTGGAGFIGSHFVRQLLAGAYPDVPADEVIVLDSLTYAGNRANLAPVDADPRLRFVHGD 63

Query: 66 RKNNRKCLYTC 76
           ++        
Sbjct: 64 IRDAGLLAREL 74

>d1db3a_ c.2.1.2 (A:) GDP-mannose 4,6-dehydratase {Escherichia coli [TaxId: 562]} Length = 357

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Tyrosine-dependent oxidoreductases
domain: GDP-mannose 4,6-dehydratase
species: Escherichia coli [TaxId: 562]

 Score = 47.1 bits (111), Expect = 1e-06
 Identities = 30/197 (15%), Positives = 59/197 (29%), Gaps = 23/197 (11%)

Query: 73  LYTCAVRPAAIYGP-----GEERHLPRIVSLAKLGL-VPFKIGEPSVKTDWIYVDNLVLA 126
           +Y C         P        R + R ++    GL     +G      DW +  + V  
Sbjct: 176 MYACNGILFNHESPRRGETFVTRKITRAIANIAQGLESCLYLGNMDSLRDWGHAKDYVKM 235

Query: 127 LILASMGLLDDIPGQKGRPIASGQPYFVSDGFPINTFEFIGPLLKTLDYDLPKSWLAVPH 186
             +                    + + ++ G   +  +F+      L   L      V  
Sbjct: 236 QWMMLQQ-------------EQPEDFVIATGVQYSVRQFVEMAAAQLGIKLRFEGTGVEE 282

Query: 187 ALFLGKVFSFFYSVLYPWLNRWWLPQPLILPAEVYKVGVTHYFSLLKAKDELCYVPIVSP 246
              +  V       + P      +      PAEV     T      KA ++L + P ++ 
Sbjct: 283 KGIVVSVTGHDAPGVKPGDVIIAVDPRYFRPAEVE----TLLGDPTKAHEKLGWKPEITL 338

Query: 247 REGMAATISYWQDRKRK 263
           RE ++  ++   +  +K
Sbjct: 339 REMVSEMVANDLEAAKK 355

>d1db3a_ c.2.1.2 (A:) GDP-mannose 4,6-dehydratase {Escherichia coli [TaxId: 562]} Length = 357

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Tyrosine-dependent oxidoreductases
domain: GDP-mannose 4,6-dehydratase
species: Escherichia coli [TaxId: 562]

 Score = 44.0 bits (103), Expect = 2e-05
 Identities = 14/37 (37%), Positives = 19/37 (51%), Gaps = 1/37 (2%)

Query: 12 KTFLVTGGLGHVGSALCLELVRRGAYQVRAFDLRTNS 48
          K  L+TG  G  GS L   L+ +G Y+V     R +S
Sbjct: 2  KVALITGVTGQDGSYLAEFLLEKG-YEVHGIKRRASS 37

>d1y1pa1 c.2.1.2 (A:2-343) Aldehyde reductase II {Sporobolomyces salmonicolor [TaxId: 5005]} Length = 342

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Tyrosine-dependent oxidoreductases
domain: Aldehyde reductase II
species: Sporobolomyces salmonicolor [TaxId: 5005]

 Score = 47.1 bits (110), Expect = 1e-06
 Identities = 17/44 (38%), Positives = 24/44 (54%), Gaps = 2/44 (4%)

Query: 10 EGKTFLVTGGLGHVGSALCLELVRRGAYQVRAFDLRTNSPWSHL 53
          EG   LVTG  G V S +  +L+  G Y+VR    R+ S  ++L
Sbjct: 10 EGSLVLVTGANGFVASHVVEQLLEHG-YKVRGTA-RSASKLANL 51

>d2blla1 c.2.1.2 (A:316-657) Polymyxin resistance protein ArnA (PrmI) {Escherichia coli [TaxId: 562]} Length = 342

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Tyrosine-dependent oxidoreductases
domain: Polymyxin resistance protein ArnA (PrmI)
species: Escherichia coli [TaxId: 562]

 Score = 46.9 bits (109), Expect = 2e-06
 Identities = 14/50 (28%), Positives = 26/50 (52%), Gaps = 1/50 (2%)

Query: 15 LVTGGLGHVGSALCLELVRRGAYQVRAFDLRTNSPWSHLLINHGVHCIQG 64
          L+ G  G +G+ L   L+R   Y+V   D+ +++  S  L +   H ++G
Sbjct: 4  LILGVNGFIGNHLTERLLREDHYEVYGLDIGSDA-ISRFLNHPHFHFVEG 52

>d1rpna_ c.2.1.2 (A:) GDP-mannose 4,6-dehydratase {Pseudomonas aeruginosa [TaxId: 287]} Length = 321

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Tyrosine-dependent oxidoreductases
domain: GDP-mannose 4,6-dehydratase
species: Pseudomonas aeruginosa [TaxId: 287]

 Score = 46.2 bits (108), Expect = 3e-06
 Identities = 16/57 (28%), Positives = 24/57 (42%), Gaps = 5/57 (8%)

Query: 12 KTFLVTGGLGHVGSALCLELVRRGAYQVRAFDLRTNSP----WSHLLINHGVHCIQG 64
          ++ LVTG  G  G+ L   L+ +G Y+V     R +S        L I   +    G
Sbjct: 1  RSALVTGITGQDGAYLAKLLLEKG-YRVHGLVARRSSDTRWRLRELGIEGDIQYEDG 56

>d1rpna_ c.2.1.2 (A:) GDP-mannose 4,6-dehydratase {Pseudomonas aeruginosa [TaxId: 287]} Length = 321

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Tyrosine-dependent oxidoreductases
domain: GDP-mannose 4,6-dehydratase
species: Pseudomonas aeruginosa [TaxId: 287]

 Score = 36.9 bits (84), Expect = 0.002
 Identities = 14/71 (19%), Positives = 23/71 (32%), Gaps = 6/71 (8%)

Query: 68  NNRKCLYTCAVRPAAIYGP-----GEERHLPRIVSLAKLGL-VPFKIGEPSVKTDWIYVD 121
                L+  +        P        R +   V+  KLG     ++G    K DW +  
Sbjct: 163 RESFGLHASSGILFNHESPLRGIEFVTRKVTDAVARIKLGKQQELRLGNVDAKRDWGFAG 222

Query: 122 NLVLALILASM 132
           + V A+ L   
Sbjct: 223 DYVEAMWLMLQ 233

>d1rkxa_ c.2.1.2 (A:) CDP-glucose-4,6-dehydratase {Yersinia pseudotuberculosis [TaxId: 633]} Length = 356

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Tyrosine-dependent oxidoreductases
domain: CDP-glucose-4,6-dehydratase
species: Yersinia pseudotuberculosis [TaxId: 633]

 Score = 46.0 bits (107), Expect = 3e-06
 Identities = 16/59 (27%), Positives = 22/59 (37%), Gaps = 4/59 (6%)

Query: 9  IEGKTFLVTGGLGHVGSALCLELVRRGAYQVRAFDLRTNSPWSHL---LINHGVHCIQG 64
           +GK   VTG  G  G  L L L   G   V+ + L   +  S      +  G+    G
Sbjct: 6  WQGKRVFVTGHTGFKGGWLSLWLQTMG-ATVKGYSLTAPTVPSLFETARVADGMQSEIG 63

>d1sb8a_ c.2.1.2 (A:) UDP-N-acetylglucosamine 4-epimerase WbpP {Pseudomonas aeruginosa [TaxId: 287]} Length = 341

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Tyrosine-dependent oxidoreductases
domain: UDP-N-acetylglucosamine 4-epimerase WbpP
species: Pseudomonas aeruginosa [TaxId: 287]

 Score = 45.0 bits (105), Expect = 8e-06
 Identities = 12/42 (28%), Positives = 19/42 (45%), Gaps = 1/42 (2%)

Query: 12 KTFLVTGGLGHVGSALCLELVRRGAYQVRAFDLRTNSPWSHL 53
          K +L+TG  G +GS L   L++    +V   D        +L
Sbjct: 17 KVWLITGVAGFIGSNLLETLLKLD-QKVVGLDNFATGHQRNL 57

>d1z45a2 c.2.1.2 (A:11-357) Uridine diphosphogalactose-4-epimerase (UDP-galactose 4-epimerase) {Baker's yeast (Saccharomyces cerevisiae) [TaxId: 4932]} Length = 347

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Tyrosine-dependent oxidoreductases
domain: Uridine diphosphogalactose-4-epimerase (UDP-galactose 4-epimerase)
species: Baker's yeast (Saccharomyces cerevisiae) [TaxId: 4932]

 Score = 43.9 bits (102), Expect = 2e-05
 Identities = 24/94 (25%), Positives = 38/94 (40%), Gaps = 13/94 (13%)

Query: 12 KTFLVTGGLGHVGSALCLELVRRGAYQVRAFDLRTNSPWSHL-----LINHGVHCIQG-- 64
          K  LVTGG G++GS   +EL+  G Y     D  +NS +  +     L  H +   +   
Sbjct: 2  KIVLVTGGAGYIGSHTVVELIENG-YDCVVADNLSNSTYDSVARLEVLTKHHIPFYEVDL 60

Query: 65 -----LRKNNRKCLYTCAVRPAAIYGPGEERHLP 93
               L K  ++      +  A +   GE   +P
Sbjct: 61 CDRKGLEKVFKEYKIDSVIHFAGLKAVGESTQIP 94

>d2c5aa1 c.2.1.2 (A:13-375) GDP-mannose-3', 5'-epimerase {Thale cress (Arabidopsis thaliana) [TaxId: 3702]} Length = 363

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Tyrosine-dependent oxidoreductases
domain: GDP-mannose-3', 5'-epimerase
species: Thale cress (Arabidopsis thaliana) [TaxId: 3702]

 Score = 43.8 bits (102), Expect = 2e-05
 Identities = 11/48 (22%), Positives = 19/48 (39%), Gaps = 1/48 (2%)

Query: 15 LVTGGLGHVGSALCLELVRRGAYQVRAFDLRTNSPWSHLLINHGVHCI 62
           +TG  G + S +   L   G + V A D + N   +  +     H +
Sbjct: 19 SITGAGGFIASHIARRLKHEG-HYVIASDWKKNEHMTEDMFCDEFHLV 65

>d1t2aa_ c.2.1.2 (A:) GDP-mannose 4,6-dehydratase {Human (Homo sapiens) [TaxId: 9606]} Length = 347

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Tyrosine-dependent oxidoreductases
domain: GDP-mannose 4,6-dehydratase
species: Human (Homo sapiens) [TaxId: 9606]

 Score = 43.8 bits (102), Expect = 2e-05
 Identities = 14/57 (24%), Positives = 25/57 (43%), Gaps = 1/57 (1%)

Query: 12 KTFLVTGGLGHVGSALCLELVRRGAYQVRAFDLRTNSPWSHLLINHGVHCIQGLRKN 68
             L+TG  G  GS L   L+ +G Y+V     R++S  +  + +   +    +  N
Sbjct: 2  NVALITGITGQDGSYLAEFLLEKG-YEVHGIVRRSSSFNTGRIEHLYKNPQAHIEGN 57

>d1xgka_ c.2.1.2 (A:) Negative transcriptional regulator NmrA {Aspergillus nidulans [TaxId: 162425]} Length = 350

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Tyrosine-dependent oxidoreductases
domain: Negative transcriptional regulator NmrA
species: Aspergillus nidulans [TaxId: 162425]

 Score = 43.9 bits (102), Expect = 2e-05
 Identities = 15/56 (26%), Positives = 20/56 (35%), Gaps = 2/56 (3%)

Query: 10 EGKTFLVTGGLGHVGSALCLELVRRGAYQVRAFDLRTNSPWS-HLLINHGVHCIQG 64
          + KT  V G  G  G++L       G + VRA         +  L     V   QG
Sbjct: 2  QKKTIAVVGATGRQGASLIRVAAAVG-HHVRAQVHSLKGLIAEELQAIPNVTLFQG 56

>d1i24a_ c.2.1.2 (A:) Sulfolipid biosynthesis protein SQD1 {Thale cress (Arabidopsis thaliana) [TaxId: 3702]} Length = 393

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Tyrosine-dependent oxidoreductases
domain: Sulfolipid biosynthesis protein SQD1
species: Thale cress (Arabidopsis thaliana) [TaxId: 3702]

 Score = 43.0 bits (99), Expect = 4e-05
 Identities = 15/61 (24%), Positives = 24/61 (39%), Gaps = 1/61 (1%)

Query: 11 GKTFLVTGGLGHVGSALCLELVRRGAYQVRAFDLRTNSPWSHLLINHGVHCIQGLRKNNR 70
          G   +V GG G+ G A  L L ++  Y+V   D      + H L    +  I  +     
Sbjct: 1  GSRVMVIGGDGYCGWATALHLSKKN-YEVCIVDNLVRRLFDHQLGLESLTPIASIHDRIS 59

Query: 71 K 71
          +
Sbjct: 60 R 60

>d1hdoa_ c.2.1.2 (A:) Biliverdin IX beta reductase {Human (Homo sapiens) [TaxId: 9606]} Length = 205

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Tyrosine-dependent oxidoreductases
domain: Biliverdin IX beta reductase
species: Human (Homo sapiens) [TaxId: 9606]

 Score = 41.9 bits (97), Expect = 4e-05
 Identities = 10/52 (19%), Positives = 16/52 (30%), Gaps = 1/52 (1%)

Query: 12 KTFLVTGGLGHVGSALCLELVRRGAYQVRAFDLRTNSPWSHLLINHGVHCIQ 63
          K   + G  G  G     + V+ G Y+V      ++   S       V    
Sbjct: 4  KKIAIFGATGQTGLTTLAQAVQAG-YEVTVLVRDSSRLPSEGPRPAHVVVGD 54

>d1ek6a_ c.2.1.2 (A:) Uridine diphosphogalactose-4-epimerase (UDP-galactose 4-epimerase) {Human (Homo sapiens) [TaxId: 9606]} Length = 346

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Tyrosine-dependent oxidoreductases
domain: Uridine diphosphogalactose-4-epimerase (UDP-galactose 4-epimerase)
species: Human (Homo sapiens) [TaxId: 9606]

 Score = 42.8 bits (99), Expect = 4e-05
 Identities = 22/100 (22%), Positives = 40/100 (40%), Gaps = 1/100 (1%)

Query: 12  KTFLVTGGLGHVGSALCLELVRRGAYQVRAFDLRTNSPWSHLLINHGVHCIQGLRKNNRK 71
           +  LVTGG G++GS   LEL+  G Y     D   N+      +   +  +Q L   + +
Sbjct: 3   EKVLVTGGAGYIGSHTVLELLEAG-YLPVVIDNFHNAFRGGGSLPESLRRVQELTGRSVE 61

Query: 72  CLYTCAVRPAAIYGPGEERHLPRIVSLAKLGLVPFKIGEP 111
                 +   A+    ++     ++  A L  V   + +P
Sbjct: 62  FEEMDILDQGALQRLFKKYSFMAVIHFAGLKAVGESVQKP 101

>d1eq2a_ c.2.1.2 (A:) ADP-L-glycero-D-mannoheptose 6-epimerase {Escherichia coli [TaxId: 562]} Length = 307

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Tyrosine-dependent oxidoreductases
domain: ADP-L-glycero-D-mannoheptose 6-epimerase
species: Escherichia coli [TaxId: 562]

 Score = 42.3 bits (97), Expect = 5e-05
 Identities = 15/78 (19%), Positives = 29/78 (37%), Gaps = 1/78 (1%)

Query: 15 LVTGGLGHVGSALCLELVRRGAYQVRAFD-LRTNSPWSHLLINHGVHCIQGLRKNNRKCL 73
          +VTGG G +GS +   L  +G   +   D L+  + + +L+  +    +       +   
Sbjct: 3  IVTGGAGFIGSNIVKALNDKGITDILVVDNLKDGTKFVNLVDLNIADYMDKEDFLIQIMA 62

Query: 74 YTCAVRPAAIYGPGEERH 91
                  AI+  G    
Sbjct: 63 GEEFGDVEAIFHEGACSS 80

>d2b69a1 c.2.1.2 (A:4-315) UDP-glucuronate decarboxylase 1 {Human (Homo sapiens) [TaxId: 9606]} Length = 312

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Tyrosine-dependent oxidoreductases
domain: UDP-glucuronate decarboxylase 1
species: Human (Homo sapiens) [TaxId: 9606]

 Score = 42.0 bits (98), Expect = 6e-05
 Identities = 28/193 (14%), Positives = 49/193 (25%), Gaps = 52/193 (26%)

Query: 73  LYTCAVRPAAIYGPG----EERHLPRIVSLAKLGLVPFKIGEPSVKTDWIYVDNLVLALI 128
           +     R    +GP     + R +   +  A  G      G  S    + YV +LV  L+
Sbjct: 164 VEVRVARIFNTFGPRMHMNDGRVVSNFILQALQGEPLTVYGSGSQTRAFQYVSDLVNGLV 223

Query: 129 LASMGLLDDIPGQKGRPIASGQPYFVSDGFPINTFEFIGPLLKTLDYDLPKSWLAVPHAL 188
                                 P  + +       EF   +   +       +L+     
Sbjct: 224 ALMN-------------SNVSSPVNLGNPEEHTILEFAQLIKNLVGSGSEIQFLSEA--- 267

Query: 189 FLGKVFSFFYSVLYPWLNRWWLPQPLILPAEVYKVGVTHYFSLLKAKDELCYVPIVSPRE 248
                                         +  K        + KAK  L + P+V   E
Sbjct: 268 ----------------------------QDDPQKR----KPDIKKAKLMLGWEPVVPLEE 295

Query: 249 GMAATISYWQDRK 261
           G+   I Y++   
Sbjct: 296 GLNKAIHYFRKEL 308

>d2b69a1 c.2.1.2 (A:4-315) UDP-glucuronate decarboxylase 1 {Human (Homo sapiens) [TaxId: 9606]} Length = 312

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Tyrosine-dependent oxidoreductases
domain: UDP-glucuronate decarboxylase 1
species: Human (Homo sapiens) [TaxId: 9606]

 Score = 41.2 bits (96), Expect = 1e-04
 Identities = 14/42 (33%), Positives = 21/42 (50%), Gaps = 1/42 (2%)

Query: 12 KTFLVTGGLGHVGSALCLELVRRGAYQVRAFDLRTNSPWSHL 53
          K  L+TGG G VGS L  +L+  G ++V   D        ++
Sbjct: 2  KRILITGGAGFVGSHLTDKLMMDG-HEVTVVDNFFTGRKRNV 42

>d1n7ha_ c.2.1.2 (A:) GDP-mannose 4,6-dehydratase {Thale-cress (Arabidopsis thaliana) [TaxId: 3702]} Length = 339

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Tyrosine-dependent oxidoreductases
domain: GDP-mannose 4,6-dehydratase
species: Thale-cress (Arabidopsis thaliana) [TaxId: 3702]

 Score = 42.0 bits (97), Expect = 8e-05
 Identities = 20/63 (31%), Positives = 28/63 (44%), Gaps = 2/63 (3%)

Query: 12 KTFLVTGGLGHVGSALCLELVRRGAYQVRAFDLRTNSPWSHLLINHGVHCIQGLRKNNRK 71
          K  L+TG  G  GS L   L+ +G Y+V     R +S ++   INH       + K   K
Sbjct: 2  KIALITGITGQDGSYLTEFLLGKG-YEVHGLI-RRSSNFNTQRINHIYIDPHNVNKALMK 59

Query: 72 CLY 74
            Y
Sbjct: 60 LHY 62

>d2q46a1 c.2.1.2 (A:2-253) Hypothetical protein At5g02240 (T7H20_290) {Thale cress (Arabidopsis thaliana) [TaxId: 3702]} Length = 252

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Tyrosine-dependent oxidoreductases
domain: Hypothetical protein At5g02240 (T7H20 290)
species: Thale cress (Arabidopsis thaliana) [TaxId: 3702]

 Score = 41.4 bits (95), Expect = 8e-05
 Identities = 14/73 (19%), Positives = 19/73 (26%), Gaps = 2/73 (2%)

Query: 12 KTFLVTGGLGHVGSALCLELVRRGAYQVRAFDLRTNSPWSHLLINHGVHCIQGLRKNNRK 71
           T LVTG  G  G  +  +L      +  A  L   S      I        G   +   
Sbjct: 4  PTVLVTGASGRTGQIVYKKLKEGS-DKFVAKGL-VRSAQGKEKIGGEADVFIGDITDADS 61

Query: 72 CLYTCAVRPAAIY 84
                   A + 
Sbjct: 62 INPAFQGIDALVI 74

>d1udca_ c.2.1.2 (A:) Uridine diphosphogalactose-4-epimerase (UDP-galactose 4-epimerase) {Escherichia coli [TaxId: 562]} Length = 338

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Tyrosine-dependent oxidoreductases
domain: Uridine diphosphogalactose-4-epimerase (UDP-galactose 4-epimerase)
species: Escherichia coli [TaxId: 562]

 Score = 40.7 bits (94), Expect = 2e-04
 Identities = 19/76 (25%), Positives = 30/76 (39%), Gaps = 7/76 (9%)

Query: 15 LVTGGLGHVGSALCLELVRRGAYQVRAFDLRTNS-----PWSHLLINHGVHCIQG-LRKN 68
          LVTGG G++GS  C++L++ G + V   D   NS     P    L       ++G +R  
Sbjct: 4  LVTGGSGYIGSHTCVQLLQNG-HDVIILDNLCNSKRSVLPVIERLGGKHPTFVEGDIRNE 62

Query: 69 NRKCLYTCAVRPAAIY 84
                        + 
Sbjct: 63 ALMTEILHDHAIDTVI 78

>d1gy8a_ c.2.1.2 (A:) Uridine diphosphogalactose-4-epimerase (UDP-galactose 4-epimerase) {Trypanosoma brucei [TaxId: 5691]} Length = 383

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Tyrosine-dependent oxidoreductases
domain: Uridine diphosphogalactose-4-epimerase (UDP-galactose 4-epimerase)
species: Trypanosoma brucei [TaxId: 5691]

 Score = 40.5 bits (93), Expect = 2e-04
 Identities = 12/57 (21%), Positives = 24/57 (42%)

Query: 15 LVTGGLGHVGSALCLELVRRGAYQVRAFDLRTNSPWSHLLINHGVHCIQGLRKNNRK 71
          LV GG G++GS     L+R   + V   D    +      +    +  + L++++  
Sbjct: 6  LVCGGAGYIGSHFVRALLRDTNHSVVIVDSLVGTHGKSDHVETRENVARKLQQSDGP 62

>d1oc2a_ c.2.1.2 (A:) dTDP-glucose 4,6-dehydratase (RmlB) {Streptococcus suis, serotype 2 [TaxId: 1307]} Length = 346

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Tyrosine-dependent oxidoreductases
domain: dTDP-glucose 4,6-dehydratase (RmlB)
species: Streptococcus suis, serotype 2 [TaxId: 1307]

 Score = 38.8 bits (89), Expect = 6e-04
 Identities = 13/57 (22%), Positives = 20/57 (35%), Gaps = 4/57 (7%)

Query: 12 KTFLVTGGLGHVGSALCLELVRRGA-YQVRAFDLRTNSPWS---HLLINHGVHCIQG 64
          K  +VTGG G +GS     +        V   D  T +        ++   V  + G
Sbjct: 3  KNIIVTGGAGFIGSNFVHYVYNNHPDVHVTVLDKLTYAGNKANLEAILGDRVELVVG 59

>d1qyca_ c.2.1.2 (A:) Phenylcoumaran benzylic ether reductase {Loblolly pine (Pinus taeda) [TaxId: 3352]} Length = 307

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Tyrosine-dependent oxidoreductases
domain: Phenylcoumaran benzylic ether reductase
species: Loblolly pine (Pinus taeda) [TaxId: 3352]

 Score = 39.0 bits (89), Expect = 6e-04
 Identities = 9/87 (10%), Positives = 24/87 (27%), Gaps = 8/87 (9%)

Query: 12 KTFLVTGGLGHVGSALCLELVRRGAYQVRAFDLRTNSPWSHL-------LINHGVHCIQG 64
             L+ G  G++G  +    +  G +        + +  +             G + + G
Sbjct: 4  SRILLIGATGYIGRHVAKASLDLG-HPTFLLVRESTASSNSEKAQLLESFKASGANIVHG 62

Query: 65 LRKNNRKCLYTCAVRPAAIYGPGEERH 91
             ++   +         I   G  + 
Sbjct: 63 SIDDHASLVEAVKNVDVVISTVGSLQI 89

>d1orra_ c.2.1.2 (A:) CDP-tyvelose-2-epimerase {Salmonella typhi [TaxId: 90370]} Length = 338

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Tyrosine-dependent oxidoreductases
domain: CDP-tyvelose-2-epimerase
species: Salmonella typhi [TaxId: 90370]

 Score = 38.9 bits (89), Expect = 6e-04
 Identities = 13/54 (24%), Positives = 21/54 (38%), Gaps = 5/54 (9%)

Query: 15 LVTGGLGHVGSALCLELVRRGAYQVRAFDLRTNSPWS----HLLINHGVHCIQG 64
          L+TGG G +GS L    + +G   +  FD  +    +     L        + G
Sbjct: 4  LITGGCGFLGSNLASFALSQG-IDLIVFDNLSRKGATDNLHWLSSLGNFEFVHG 56

>d2bkaa1 c.2.1.2 (A:5-236) TAT-interacting protein TIP30 {Human (Homo sapiens) [TaxId: 9606]} Length = 232

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Tyrosine-dependent oxidoreductases
domain: TAT-interacting protein TIP30
species: Human (Homo sapiens) [TaxId: 9606]

 Score = 38.6 bits (88), Expect = 7e-04
 Identities = 13/86 (15%), Positives = 29/86 (33%), Gaps = 1/86 (1%)

Query: 2  HLSENEGIEGKTFLVTGGLGHVGSALCLELVRRGAY-QVRAFDLRTNSPWSHLLINHGVH 60
           L E+  ++ K+  + G  G  G  L  E++ +G + +V     R  +       N    
Sbjct: 5  KLREDFRMQNKSVFILGASGETGRVLLKEILEQGLFSKVTLIGRRKLTFDEEAYKNVNQE 64

Query: 61 CIQGLRKNNRKCLYTCAVRPAAIYGP 86
           +   + ++    +          G 
Sbjct: 65 VVDFEKLDDYASAFQGHDVGFCCLGT 90

>d1e6ua_ c.2.1.2 (A:) GDP-4-keto-6-deoxy-d-mannose epimerase/reductase (GDP-fucose synthetase) {Escherichia coli [TaxId: 562]} Length = 315

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Tyrosine-dependent oxidoreductases
domain: GDP-4-keto-6-deoxy-d-mannose epimerase/reductase (GDP-fucose synthetase)
species: Escherichia coli [TaxId: 562]

 Score = 38.3 bits (88), Expect = 8e-04
 Identities = 10/36 (27%), Positives = 15/36 (41%), Gaps = 1/36 (2%)

Query: 12 KTFLVTGGLGHVGSALCLELVRRGAYQVRAFDLRTN 47
          +   + G  G VGSA+  +L +RG         R  
Sbjct: 3  QRVFIAGHRGMVGSAIRRQLEQRG-DVELVLRTRDE 37

>d1qyda_ c.2.1.2 (A:) Pinoresinol-lariciresinol reductase {Giant arborvitae (Thuja plicata) [TaxId: 3316]} Length = 312

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Tyrosine-dependent oxidoreductases
domain: Pinoresinol-lariciresinol reductase
species: Giant arborvitae (Thuja plicata) [TaxId: 3316]

 Score = 37.8 bits (86), Expect = 0.001
 Identities = 8/56 (14%), Positives = 15/56 (26%), Gaps = 7/56 (12%)

Query: 15 LVTGGLGHVGSALCLELVRRGAYQVRAFDLRTNS------PWSHLLINHGVHCIQG 64
          L+ GG G++G  +    +  G +                          G   I+ 
Sbjct: 7  LIVGGTGYIGKRIVNASISLG-HPTYVLFRPEVVSNIDKVQMLLYFKQLGAKLIEA 61

>d2a35a1 c.2.1.2 (A:4-215) Hypothetical protein PA4017 {Pseudomonas aeruginosa [TaxId: 287]} Length = 212

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Tyrosine-dependent oxidoreductases
domain: Hypothetical protein PA4017
species: Pseudomonas aeruginosa [TaxId: 287]

 Score = 37.1 bits (84), Expect = 0.002
 Identities = 10/65 (15%), Positives = 20/65 (30%), Gaps = 1/65 (1%)

Query: 12 KTFLVTGGLGHVGSALCLELVRRGAYQVRAFDLRTNSPWSHLLINHGVHCIQGLRKNNRK 71
          K  L+ G  G  G  L   ++       +       +   H  +++ V  +  L      
Sbjct: 3  KRVLLAGATGLTGEHLLDRILSEP-TLAKVIAPARKALAEHPRLDNPVGPLAELLPQLDG 61

Query: 72 CLYTC 76
           + T 
Sbjct: 62 SIDTA 66

>d1o5ia_ c.2.1.2 (A:) beta-keto acyl carrier protein reductase {Thermotoga maritima [TaxId: 2336]} Length = 234

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Tyrosine-dependent oxidoreductases
domain: beta-keto acyl carrier protein reductase
species: Thermotoga maritima [TaxId: 2336]

 Score = 36.6 bits (84), Expect = 0.002
 Identities = 10/29 (34%), Positives = 13/29 (44%)

Query: 8  GIEGKTFLVTGGLGHVGSALCLELVRRGA 36
          GI  K  LV      +G A+   L + GA
Sbjct: 1  GIRDKGVLVLAASRGIGRAVADVLSQEGA 29

>d1dhra_ c.2.1.2 (A:) Dihydropteridin reductase (pteridine reductase) {Rat (Rattus norvegicus) [TaxId: 10116]} Length = 236

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Tyrosine-dependent oxidoreductases
domain: Dihydropteridin reductase (pteridine reductase)
species: Rat (Rattus norvegicus) [TaxId: 10116]

 Score = 36.7 bits (84), Expect = 0.003
 Identities = 14/52 (26%), Positives = 19/52 (36%), Gaps = 1/52 (1%)

Query: 10 EGKTFLVTGGLGHVGSALCLELVRRGAYQVRAFDLRTNSPWSHLLINHGVHC 61
          E +  LV GG G +GS        R    V + D+  N   S  +I      
Sbjct: 1  EARRVLVYGGRGALGSRCVQAFRARNW-WVASIDVVENEEASASVIVKMTDS 51

>d1fmca_ c.2.1.2 (A:) 7-alpha-hydroxysteroid dehydrogenase {Escherichia coli [TaxId: 562]} Length = 255

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Tyrosine-dependent oxidoreductases
domain: 7-alpha-hydroxysteroid dehydrogenase
species: Escherichia coli [TaxId: 562]

 Score = 36.6 bits (84), Expect = 0.003
 Identities = 10/36 (27%), Positives = 18/36 (50%)

Query: 1  MHLSENEGIEGKTFLVTGGLGHVGSALCLELVRRGA 36
          M  S+N  ++GK  ++TG    +G  + +     GA
Sbjct: 1  MFNSDNLRLDGKCAIITGAGAGIGKEIAITFATAGA 36

Homologous Domains Detected by HHsearch

Original result of HHsearch against SCOP70(version1.75) database

ID	Length	Definition	Probability
Query	366
d1r6da_	322	dTDP-glucose 4,6-dehydratase (RmlB) {Streptomyces	99.97
d2b69a1	312	UDP-glucuronate decarboxylase 1 {Human (Homo sapie	99.96
d1kewa_	361	dTDP-glucose 4,6-dehydratase (RmlB) {Streptococcus	99.96
d2blla1	342	Polymyxin resistance protein ArnA (PrmI) {Escheric	99.96
d1sb8a_	341	UDP-N-acetylglucosamine 4-epimerase WbpP {Pseudomo	99.96
d1oc2a_	346	dTDP-glucose 4,6-dehydratase (RmlB) {Streptococcus	99.96
d1rpna_	321	GDP-mannose 4,6-dehydratase {Pseudomonas aeruginos	99.96
d2c5aa1	363	GDP-mannose-3', 5'-epimerase {Thale cress (Arabido	99.96
d1udca_	338	Uridine diphosphogalactose-4-epimerase (UDP-galact	99.94
d1db3a_	357	GDP-mannose 4,6-dehydratase {Escherichia coli [Tax	99.94
d1n7ha_	339	GDP-mannose 4,6-dehydratase {Thale-cress (Arabidop	99.94
d1ek6a_	346	Uridine diphosphogalactose-4-epimerase (UDP-galact	99.94
d1gy8a_	383	Uridine diphosphogalactose-4-epimerase (UDP-galact	99.93
d1rkxa_	356	CDP-glucose-4,6-dehydratase {Yersinia pseudotuberc	99.93
d1t2aa_	347	GDP-mannose 4,6-dehydratase {Human (Homo sapiens)	99.92
d1orra_	338	CDP-tyvelose-2-epimerase {Salmonella typhi [TaxId:	99.92
d1z45a2	347	Uridine diphosphogalactose-4-epimerase (UDP-galact	99.92
d1i24a_	393	Sulfolipid biosynthesis protein SQD1 {Thale cress	99.92
d1vl0a_	281	DTDP-4-dehydrorhamnose reductase RfbD {Clostridium	99.91
d1eq2a_	307	ADP-L-glycero-D-mannoheptose 6-epimerase {Escheric	99.91
d1e6ua_	315	GDP-4-keto-6-deoxy-d-mannose epimerase/reductase (	99.89
d1qyca_	307	Phenylcoumaran benzylic ether reductase {Loblolly	99.83
d1y1pa1	342	Aldehyde reductase II {Sporobolomyces salmonicolor	99.82
d1qyda_	312	Pinoresinol-lariciresinol reductase {Giant arborvi	99.81
d1n2sa_	298	dTDP-6-deoxy-L-lyxo-4-hexulose reductase (RmlD) {S	99.71
d2q46a1	252	Hypothetical protein At5g02240 (T7H20_290) {Thale	99.64
d1hdoa_	205	Biliverdin IX beta reductase {Human (Homo sapiens)	99.55
d1xgka_	350	Negative transcriptional regulator NmrA {Aspergill	99.53
d2bkaa1	232	TAT-interacting protein TIP30 {Human (Homo sapiens	99.51
d2a35a1	212	Hypothetical protein PA4017 {Pseudomonas aeruginos	99.31
d1ulsa_	242	beta-keto acyl carrier protein reductase {Thermus	98.33
d1h5qa_	260	Mannitol dehydrogenase {Mushroom (Agaricus bisporu	98.22
d2a4ka1	241	beta-keto acyl carrier protein reductase {Thermus	98.2
d1fmca_	255	7-alpha-hydroxysteroid dehydrogenase {Escherichia	98.17
d1uzma1	237	beta-keto acyl carrier protein reductase {Mycobact	98.15
d1uaya_	241	Type II 3-hydroxyacyl-CoA dehydrogenase {Thermus t	98.15
d1pr9a_	244	Carbonyl reductase {Human (Homo sapiens) [TaxId: 9	98.14
d2c07a1	251	beta-keto acyl carrier protein reductase {Malaria	98.1
d1o5ia_	234	beta-keto acyl carrier protein reductase {Thermoto	98.08
d2o23a1	248	Type II 3-hydroxyacyl-CoA dehydrogenase {Human (Ho	98.08
d1q7ba_	243	beta-keto acyl carrier protein reductase {Escheric	98.08
d1ydea1	250	Retinal dehydrogenase/reductase 3 {Human (Homo sap	98.06
d2ew8a1	247	(s)-1-phenylethanol dehydrogenase {Azoarcus sp. eb	98.04
d1ae1a_	258	Tropinone reductase {Jimsonweed (Datura stramonium	98.02
d1cyda_	242	Carbonyl reductase {Mouse (Mus musculus) [TaxId: 1	98.01
d1w6ua_	294	2,4-dienoyl-CoA reductase, mitochondrial (DECR) {H	98.0
d2gdza1	254	15-hydroxyprostaglandin dehydrogenase, PGDH {Human	97.97
d2bgka1	268	Rhizome secoisolariciresinol dehydrogenase {Mayapp	97.97
d1nffa_	244	Putative oxidoreductase Rv2002 {Mycobacterium tube	97.96
d1k2wa_	256	Sorbitol dehydrogenase {Rhodobacter sphaeroides [T	97.94
d1x1ta1	260	D(-)-3-hydroxybutyrate dehydrogenase {Pseudomonas	97.94
d2d1ya1	248	Hypothetical protein TTHA0369 {Thermus thermophilu	97.93
d2ag5a1	245	Dehydrogenase/reductase SDR family member 6, DHRS6	97.91
d1vl8a_	251	Gluconate 5-dehydrogenase {Thermotoga maritima [Ta	97.91
d1g0oa_	272	1,3,8-trihydroxynaphtalene reductase (THNR, naphto	97.91
d1hdca_	254	3-alpha,20-beta-hydroxysteroid dehydrogenase {Stre	97.88
d1ja9a_	259	1,3,6,8-tetrahydroxynaphthalene reductase {Rice bl	97.88
d1qsga_	258	Enoyl-ACP reductase {Escherichia coli [TaxId: 562]	97.87
d1ulua_	256	Enoyl-ACP reductase {Thermus thermophilus [TaxId:	97.84
d1zk4a1	251	R-specific alcohol dehydrogenase {Lactobacillus br	97.83
d1zema1	260	Xylitol dehydrogenase {Gluconobacter oxydans [TaxI	97.83
d1geea_	261	Glucose dehydrogenase {Bacillus megaterium [TaxId:	97.82
d1yxma1	297	Peroxisomal trans 2-enoyl CoA reductase {Human (Ho	97.77
d2pd4a1	274	Enoyl-ACP reductase {Helicobacter pylori [TaxId: 2	97.77
d2rhca1	257	beta-keto acyl carrier protein reductase {Streptom	97.76
d1xq1a_	259	Tropinone reductase {Thale cress (Arabidopsis thal	97.73
d1iy8a_	258	Levodione reductase {Corynebacterium aquaticum [Ta	97.72
d2ae2a_	259	Tropinone reductase {Jimsonweed (Datura stramonium	97.72
d1spxa_	264	Glucose dehydrogenase (5l265) {Nematode (Caenorhab	97.7
d1gega_	255	meso-2,3-butanediol dehydrogenase {Klebsiella pneu	97.66
d1gz6a_	302	(3R)-hydroxyacyl-CoA dehydrogenase domain of estra	97.65
d2h7ma1	268	Enoyl-ACP reductase {Mycobacterium tuberculosis, T	97.64
d1edoa_	244	beta-keto acyl carrier protein reductase {Oil seed	97.64
d1hxha_	253	3beta/17beta hydroxysteroid dehydrogenase {Comamon	97.57
d1xhla_	274	Hypothetical protein F25D1.5 {Caenorhabditis elega	97.52
d2fr1a1	259	Erythromycin synthase, eryAI, 1st ketoreductase mo	97.37
d1mxha_	266	Dihydropteridin reductase (pteridine reductase) {T	97.35
d1yo6a1	250	Putative carbonyl reductase sniffer {Caenorhabditi	97.35
d1luaa1	191	Methylene-tetrahydromethanopterin dehydrogenase {M	97.34
d1dhra_	236	Dihydropteridin reductase (pteridine reductase) {R	97.21
d1bdba_	276	Cis-biphenyl-2,3-dihydrodiol-2,3-dehydrogenase {Ps	97.21
d1fjha_	257	3-alpha-hydroxysteroid dehydrogenase {Comamonas te	97.19
d1jaya_	212	Coenzyme F420H2:NADP+ oxidoreductase (FNO) {Archae	97.17
d2pv7a2	152	Prephenate dehydrogenase TyrA {Haemophilus influen	97.16
d1yb1a_	244	17-beta-hydroxysteroid dehydrogenase type XI {Huma	97.14
d1xu9a_	269	11-beta-hydroxysteroid dehydrogenase 1 {Human (Hom	97.13
d1zmta1	252	Halohydrin dehalogenase HheC {Agrobacterium tumefa	97.1
d1snya_	248	Carbonyl reductase sniffer {Fruit fly (Drosophila	97.08
d1sbya1	254	Drosophila alcohol dehydrogenase {Fly (Drosophila	97.07
d1ooea_	235	Dihydropteridin reductase (pteridine reductase) {N	97.01
d1xg5a_	257	Putative dehydrogenase ARPG836 (MGC4172) {Human (H	96.99
d1lssa_	132	Ktn Mja218 {Archaeon Methanococcus jannaschii [Tax	96.99
d1e5qa1	182	Saccharopine reductase {Rice blast fungus (Magnapo	96.68
d2bd0a1	240	Bacterial sepiapterin reductase {Chlorobium tepidu	96.64
d1xkqa_	272	Hypothetical protein R05D8.7 {Caenorhabditis elega	96.51
d1d7oa_	297	Enoyl-ACP reductase {Oil seed rape (Brassica napus	96.11
d1wmaa1	275	Carbonyl reductase/20beta-hydroxysteroid dehydroge	96.09
d1ks9a2	167	Ketopantoate reductase PanE {Escherichia coli [Tax	96.08
d1t4ba1	146	Aspartate beta-semialdehyde dehydrogenase {Escheri	95.98
d2hmva1	134	Ktn bsu222 {Bacillus subtilis [TaxId: 1423]}	95.78
d1oaaa_	259	Sepiapterin reductase {Mouse (Mus musculus) [TaxId	95.77
d1o8ca2	77	Hypothetical protein YhdH {Escherichia coli [TaxId	95.44
d1hyea1	145	MJ0490, lactate/malate dehydrogenase {Archaeon Met	95.17
d2g17a1	179	N-acetyl-gamma-glutamyl-phosphate reductase ArgC {	95.15
d1vkna1	176	N-acetyl-gamma-glutamyl-phosphate reductase ArgC {	95.06
d2f1ka2	165	Prephenate dehydrogenase TyrA {Synechocystis sp. p	95.04
d1e7wa_	284	Dihydropteridin reductase (pteridine reductase) {L	94.97
d1n1ea2	189	Glycerol-3- phosphate dehydrogenase {Trypanosome (	94.97
d2jfga1	93	UDP-N-acetylmuramoyl-L-alanine:D-glutamate ligase	94.96
d2hjsa1	144	Usg-1 protein homolog PA3116 {Pseudomonas aerugino	94.95
d1jtva_	285	Human estrogenic 17beta-hydroxysteroid dehydrogena	94.8
d1ez4a1	146	Lactate dehydrogenase {Lactobacillus pentosus [Tax	94.79
d2cvoa1	183	Putative semialdehyde dehydrogenase {Rice (Oryza s	94.66
d1pzga1	154	Lactate dehydrogenase {Toxoplasma gondii [TaxId: 5	94.59
d1mlda1	144	Malate dehydrogenase {Pig (Sus scrofa) [TaxId: 982	94.46
d1mb4a1	147	Aspartate beta-semialdehyde dehydrogenase {Vibrio	94.36
d1mv8a2	202	GDP-mannose 6-dehydrogenase {Pseudomonas aeruginos	94.13
d1f0ya2	192	Short chain L-3-hydroxyacyl CoA dehydrogenase {Hum	94.13
d1pjqa1	113	Siroheme synthase CysG, domain 1 {Salmonella typhi	94.02
d1guza1	142	Malate dehydrogenase {Chlorobium vibrioforme [TaxI	94.0
d1bg6a2	184	N-(1-D-carboxylethyl)-L-norvaline dehydrogenase {A	93.99
d3cuma2	162	Hydroxyisobutyrate dehydrogenase {Pseudomonas aeru	93.94
d2cmda1	145	Malate dehydrogenase {Escherichia coli [TaxId: 562	93.83
d2g5ca2	171	Prephenate dehydrogenase TyrA {Aquifex aeolicus [T	93.6
d2ldxa1	159	Lactate dehydrogenase {Mouse (Mus musculus) [TaxId	93.49
d1id1a_	153	Rck domain from putative potassium channel Kch {Es	93.48
d1ldna1	148	Lactate dehydrogenase {Bacillus stearothermophilus	93.32
d2gz1a1	154	Aspartate beta-semialdehyde dehydrogenase {Strepto	93.16
d1p3da1	96	UDP-N-acetylmuramate-alanine ligase MurC {Haemophi	92.92
d1tt7a2	167	Hypothetical protein YhfP {Bacillus subtilis [TaxI	92.83
d1yb5a2	174	Quinone oxidoreductase {Human (Homo sapiens) [TaxI	92.65
d1xa0a2	176	B. subtilis YhfP homologue {Bacillus stearothermop	92.65
d1o6za1	142	Malate dehydrogenase {Archaeon Haloarcula marismor	92.65
d1vpda2	161	Hydroxyisobutyrate dehydrogenase {Salmonella typhi	92.58
d1uxja1	142	Malate dehydrogenase {Chloroflexus aurantiacus [Ta	92.55
d1y7ta1	154	Malate dehydrogenase {Thermus thermophilus [TaxId:	92.5
d1j6ua1	89	UDP-N-acetylmuramate-alanine ligase MurC {Thermoto	92.27
d1y6ja1	142	Lactate dehydrogenase {Clostridium thermocellum [T	92.25
d1ojua1	142	Malate dehydrogenase {Archaeon Archaeoglobus fulgi	92.08
d1v3va2	182	Leukotriene b4 12-hydroxydehydrogenase/prostagland	92.03
d1iz0a2	171	Quinone oxidoreductase {Thermus thermophilus [TaxI	91.97
d1t2da1	150	Lactate dehydrogenase {Malaria parasite (Plasmodiu	91.94
d1c0pa1	268	D-aminoacid oxidase, N-terminal domain {Rhodotorul	91.9
d1yqga2	152	Pyrroline-5-carboxylate reductase ProC {Neisseria	91.74
d1kyqa1	150	Bifunctional dehydrogenase/ferrochelatase Met8p, N	91.65
d1qora2	179	Quinone oxidoreductase {Escherichia coli [TaxId: 5	91.61
d1o89a2	177	Hypothetical protein YhdH {Escherichia coli [TaxId	91.44
d1dlja2	196	UDP-glucose dehydrogenase (UDPGDH) {Streptococcus	91.4
d7mdha1	175	Malate dehydrogenase {Sorghum (Sorghum vulgare), c	91.33
d1wdka3	186	Fatty oxidation complex alpha subunit, middle doma	91.18
d5mdha1	154	Malate dehydrogenase {Pig (Sus scrofa) [TaxId: 982	91.1
d1d7ya2	121	NADH-dependent ferredoxin reductase, BphA4 {Pseudo	91.09
d1i36a2	152	Conserved hypothetical protein MTH1747 {Archaeon M	91.0
d1pgja2	178	6-phosphogluconate dehydrogenase {Trypanosoma bruc	90.92
d1i0za1	160	Lactate dehydrogenase {Human (Homo sapiens), heart	90.85
d1hyha1	146	L-2-hydroxyisocapronate dehydrogenase, L-HICDH {La	90.73
d1u7za_	223	Coenzyme A biosynthesis bifunctional protein CoaBC	90.72
d1a5za1	140	Lactate dehydrogenase {Thermotoga maritima [TaxId:	90.32
d1pqwa_	183	Putative enoyl reductase domain of polyketide synt	90.27
d1kjqa2	111	Glycinamide ribonucleotide transformylase PurT, N-	90.1
d1gpja2	159	Glutamyl tRNA-reductase middle domain {Archaeon Me	89.98
d1vm6a3	128	Dihydrodipicolinate reductase {Thermotoga maritima	89.79
d2pgda2	176	6-phosphogluconate dehydrogenase {Sheep (Ovis orie	89.61
d1nhpa2	123	NADH peroxidase {Enterococcus faecalis [TaxId: 135	89.54
d1llda1	143	Lactate dehydrogenase {Bifidobacterium longum, str	89.31
d1piwa2	168	Cinnamyl alcohol dehydrogenase, ADH6 {Baker's yeas	89.28
d1ebda2	117	Dihydrolipoamide dehydrogenase {Bacillus stearothe	88.97
d1vj0a2	182	Hypothetical protein TM0436 {Thermotoga maritima [	88.95
d1jvba2	170	Alcohol dehydrogenase {Archaeon Sulfolobus solfata	88.27
d1gesa2	116	Glutathione reductase {Escherichia coli [TaxId: 56	88.26
d1v59a2	122	Dihydrolipoamide dehydrogenase {Baker's yeast (Sac	88.03
d3etja2	78	N5-carboxyaminoimidazole ribonucleotide synthetase	87.98
d1gtea4	196	Dihydropyrimidine dehydrogenase, domain 2 {Pig (Su	87.87
d1onfa2	117	Glutathione reductase {Plasmodium falciparum [TaxI	87.71
d2ivda1	347	Protoporphyrinogen oxidase {Myxococcus xanthus [Ta	87.53
d2ahra2	152	Pyrroline-5-carboxylate reductase ProC {Streptococ	87.44
d1txga2	180	Glycerol-3- phosphate dehydrogenase {Archaeoglobus	87.21
d1lvla2	115	Dihydrolipoamide dehydrogenase {Pseudomonas putida	87.14
d1q1ra2	133	Putidaredoxin reductase {Pseudomonas putida [TaxId	87.13
d3lada2	119	Dihydrolipoamide dehydrogenase {Azotobacter vinela	86.63
d2bi7a1	314	UDP-galactopyranose mutase, N-terminal domain {Kle	86.6
d1xhca2	122	NADH oxidase /nitrite reductase {Pyrococcus furios	86.26
d1uh5a_	329	Enoyl-ACP reductase {Malaria parasite (Plasmodium	86.17
d1ps9a3	179	2,4-dienoyl-CoA reductase, middle domain {Escheric	85.77
d3grsa2	125	Glutathione reductase {Human (Homo sapiens) [TaxId	85.68
d1ryia1	276	Glycine oxidase ThiO {Bacillus sp. [TaxId: 1409]}	85.67
d1mo9a2	121	NADH-dependent 2-ketopropyl coenzyme M oxidoreduct	85.17
d1li4a1	163	S-adenosylhomocystein hydrolase {Human (Homo sapie	85.16
d1h6va2	122	Mammalian thioredoxin reductase {Rat (Rattus norve	85.13
d1npya1	167	Shikimate 5-dehydrogenase-like protein HI0607 {Hae	85.09
d1vj1a2	187	Putative zinc-binding alcohol dehydrogenase {Mouse	85.03
d2jhfa2	176	Alcohol dehydrogenase {Horse (Equus caballus) [Tax	84.91
d1q0qa2	151	1-deoxy-D-xylulose-5-phosphate reductoisomerase {E	84.71
d1vi2a1	182	Putative shikimate dehydrogenase YdiB {Escherichia	84.6
d1e3ja2	170	Ketose reductase (sorbitol dehydrogenase) {Silverl	84.14
d1pl8a2	171	Ketose reductase (sorbitol dehydrogenase) {Human (	84.12
d1llua2	166	Alcohol dehydrogenase {Pseudomonas aeruginosa [Tax	84.07
d2fy8a1	129	Potassium channel-related protein MthK {Archaeon M	83.92
d1c1da1	201	Phenylalanine dehydrogenase {Rhodococcus sp., M4 [	83.87
d2voua1	265	Dihydroxypyridine hydroxylase DhpH {Arthrobacter n	83.81
d1seza1	373	Protoporphyrinogen oxidase {Tobacco (Nicotiana tab	83.46
d1qp8a1	181	Putative formate dehydrogenase {Archaeon Pyrobacul	83.14
d1r0ka2	150	1-deoxy-D-xylulose-5-phosphate reductoisomerase {Z	82.92
d1ojta2	125	Dihydrolipoamide dehydrogenase {Neisseria meningit	82.78
d1pj5a2	305	N,N-dimethylglycine oxidase {Arthrobacter globifor	82.08
d1uufa2	168	Hypothetical protein YahK {Escherichia coli [TaxId	81.96
d1dxla2	123	Dihydrolipoamide dehydrogenase {Garden pea (Pisum	81.95
d1fcda1	186	Flavocytochrome c sulfide dehydrogenase, FCSD, fla	81.88
d1jw9b_	247	Molybdenum cofactor biosynthesis protein MoeB {Esc	81.79
d1ne2a_	197	Hypothetical protein Ta1320 {Archaeon Thermoplasma	81.47
d1dxya1	199	D-2-hydroxyisocaproate dehydrogenase {Lactobacillu	80.91
d1b5qa1	347	Polyamine oxidase {Maize (Zea mays) [TaxId: 4577]}	80.85
d2iida1	370	L-aminoacid oxidase {Malayan pit viper (Calloselas	80.83
d1gu7a2	189	2,4-dienoyl-CoA reductase {Yeast (Candida tropical	80.52
d2gv8a1	335	Flavin-dependent monoxygenase SPBP16F5.08c {Schizo	80.42
d1j4aa1	197	D-lactate dehydrogenase {Lactobacillus helveticus	80.34

>d1r6da_ c.2.1.2 (A:) dTDP-glucose 4,6-dehydratase (RmlB) {Streptomyces venezuelae [TaxId: 54571]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Tyrosine-dependent oxidoreductases
domain: dTDP-glucose 4,6-dehydratase (RmlB)
species: Streptomyces venezuelae [TaxId: 54571]

Probab=99.97  E-value=4.3e-30  Score=240.38  Aligned_cols=205  Identities=22%  Similarity=0.299  Sum_probs=162.3

Q ss_pred             CeEEEEcCCChhHHHHHHHHHHcCC-----ceEEEEecCCCCcccc----cccCCCeEEEEcc-----------------
Q 017760           12 KTFLVTGGLGHVGSALCLELVRRGA-----YQVRAFDLRTNSPWSH----LLINHGVHCIQGL-----------------   65 (366)
Q Consensus        12 ~~VlITGgtGfiG~~L~~~L~~~g~-----~~V~~~dr~~~~~~~~----~~~~~~v~~i~gD-----------------   65 (366)
                      |||+|||||||||++|++.|+++|+     .+|+.+|.........    .....+++++++|                 
T Consensus         1 MkIlItG~tGfIG~~l~~~L~~~g~~v~~~~~i~~~d~~~~~~~~~~~~~~~~~~~~~~~~~d~~~~~~~~~~~~~~d~v   80 (322)
T d1r6da_           1 MRLLVTGGAGFIGSHFVRQLLAGAYPDVPADEVIVLDSLTYAGNRANLAPVDADPRLRFVHGDIRDAGLLARELRGVDAI   80 (322)
T ss_dssp             CEEEEETTTSHHHHHHHHHHHHTSCTTSCCSEEEEEECCCTTCCGGGGGGGTTCTTEEEEECCTTCHHHHHHHTTTCCEE
T ss_pred             CEEEEECCCCHHHHHHHHHHHHCCCCccCCceEEEEeCCCccccHhHhhhhhcCCCeEEEEeccccchhhhccccccceE
Confidence            6899999999999999999999983     2456666544332221    1124678889888                 


Q ss_pred             --------------------------------------------------------------------------------
Q 017760           66 --------------------------------------------------------------------------------   65 (366)
Q Consensus        66 --------------------------------------------------------------------------------   65 (366)
                                                                                                      
T Consensus        81 i~~a~~~~~~~~~~~~~~~~~~N~~gt~~ll~~~~~~~~~~~I~~Ss~~~yg~~~~~~~~E~~~~~p~~~Y~~sK~~~E~  160 (322)
T d1r6da_          81 VHFAAESHVDRSIAGASVFTETNVQGTQTLLQCAVDAGVGRVVHVSTNQVYGSIDSGSWTESSPLEPNSPYAASKAGSDL  160 (322)
T ss_dssp             EECCSCCCHHHHHHCCHHHHHHHTHHHHHHHHHHHHTTCCEEEEEEEGGGGCCCSSSCBCTTSCCCCCSHHHHHHHHHHH
T ss_pred             EeecccccccccccchHHHhhhhHHHHHHHHHHHHHcCCceEEEeecceeecCCCCCCCCCCCCCCCCCHHHHHHHHHHH
Confidence                                                                                            


Q ss_pred             ---ccCCCCCceEEEEeCCccccCCCC--CCHHHHHHHHHcCCCCeeecCCCcceeceeHHHHHHHHHHHHhccccCCCC
Q 017760           66 ---RKNNRKCLYTCAVRPAAIYGPGEE--RHLPRIVSLAKLGLVPFKIGEPSVKTDWIYVDNLVLALILASMGLLDDIPG  140 (366)
Q Consensus        66 ---ks~~~~~l~~~ilRp~~iyGp~~~--~~l~~~i~~~~~g~~~~~~g~~~~~~~~v~vdDla~a~~~a~~~l~~~~~~  140 (366)
                         ...+..+++++++||++||||++.  +.++.++..+.+|+.+.++|+|++.++|+|++|+|+++..++++       
T Consensus       161 ~~~~~~~~~~~~~~~lR~~~vyGp~~~~~~~i~~~i~~~~~~~~i~v~~~g~~~r~~i~v~D~a~ai~~~~~~-------  233 (322)
T d1r6da_         161 VARAYHRTYGLDVRITRCCNNYGPYQHPEKLIPLFVTNLLDGGTLPLYGDGANVREWVHTDDHCRGIALVLAG-------  233 (322)
T ss_dssp             HHHHHHHHHCCCEEEEEECEEECTTCCTTSHHHHHHHHHHTTCCEEEETTSCCEEEEEEHHHHHHHHHHHHHH-------
T ss_pred             HHHHHHHHhCCCEEEEEeeeEECcCCCcCcHHHHHHHHHHcCCCcEEecCCCeEEccEEHHHHHHHHHHHHhC-------
Confidence               013455899999999999999874  56899999999999888899999999999999999999999973       


Q ss_pred             CCCCCCCCCccEEecCCCCCCHHHHHHHHHHhcCCCCCccccCHHHHHHHHHHHHHHHHhhhhccccccCCCCCCcHHhh
Q 017760          141 QKGRPIASGQPYFVSDGFPINTFEFIGPLLKTLDYDLPKSWLAVPHALFLGKVFSFFYSVLYPWLNRWWLPQPLILPAEV  220 (366)
Q Consensus       141 ~~~~~~~~g~~y~I~~~~~vs~~e~~~~l~~~lg~~~~~~~lp~~~~~~~a~~~e~~~~~~~~~~~~~~~~~p~l~~~ev  220 (366)
                           ...+++||++++++++..|+++.+.+.+|.+.+.+...                           ..+   +.+ 
T Consensus       234 -----~~~~~~~ni~~~~~~s~~e~~~~i~~~~~~~~~~~~~~---------------------------~~~---~~~-  277 (322)
T d1r6da_         234 -----GRAGEIYHIGGGLELTNRELTGILLDSLGADWSSVRKV---------------------------ADR---KGH-  277 (322)
T ss_dssp             -----CCTTCEEEECCCCEEEHHHHHHHHHHHHTCCGGGEEEE---------------------------CCC---TTC-
T ss_pred             -----CCCCCeeEEeecccchhHHHHHHHHHHhCCCccceeec---------------------------CCC---CCC-
Confidence                 33578999999999999999999999999775432110                           111   111 


Q ss_pred             hhhcccceecHHHHHHhcCCCCCCChHHHHHHHHHHHHhccc
Q 017760          221 YKVGVTHYFSLLKAKDELCYVPIVSPREGMAATISYWQDRKR  262 (366)
Q Consensus       221 ~~~~~~~~~d~~ka~~~LG~~p~~~~~e~l~~~v~~~~~~~~  262 (366)
                         .....+|++|++++|||+|+++++|+|+++++||++++.
T Consensus       278 ---~~~~~~d~~k~~~~lg~~p~~~~eegI~~~i~w~~~n~~  316 (322)
T d1r6da_         278 ---DLRYSLDGGKIERELGYRPQVSFADGLARTVRWYRENRG  316 (322)
T ss_dssp             ---CCBCCBCCHHHHHHHCCCCCSCHHHHHHHHHHHHHHCHH
T ss_pred             ---CceeeeCHHHHHHHHCCCCCCCHHHHHHHHHHHHHHhHH
Confidence               122358999999999999999999999999999998663

>d2b69a1 c.2.1.2 (A:4-315) UDP-glucuronate decarboxylase 1 {Human (Homo sapiens) [TaxId: 9606]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Tyrosine-dependent oxidoreductases
domain: UDP-glucuronate decarboxylase 1
species: Human (Homo sapiens) [TaxId: 9606]

Probab=99.96  E-value=5.6e-29  Score=232.01  Aligned_cols=145  Identities=19%  Similarity=0.223  Sum_probs=120.1

Q ss_pred             CCCCceEEEEeCCccccCCCC----CCHHHHHHHHHcCCCCeeecCCCcceeceeHHHHHHHHHHHHhccccCCCCCCCC
Q 017760           69 NRKCLYTCAVRPAAIYGPGEE----RHLPRIVSLAKLGLVPFKIGEPSVKTDWIYVDNLVLALILASMGLLDDIPGQKGR  144 (366)
Q Consensus        69 ~~~~l~~~ilRp~~iyGp~~~----~~l~~~i~~~~~g~~~~~~g~~~~~~~~v~vdDla~a~~~a~~~l~~~~~~~~~~  144 (366)
                      +.++++++++||++||||++.    +.++.++..+.+|+.+.++|++++.++|+|++|++++++.+++.           
T Consensus       160 ~~~~~~~~~lR~~~vyGp~~~~~~~~~i~~~i~~~~~g~~i~i~~~g~~~r~~i~v~D~~~~~~~~~~~-----------  228 (312)
T d2b69a1         160 KQEGVEVRVARIFNTFGPRMHMNDGRVVSNFILQALQGEPLTVYGSGSQTRAFQYVSDLVNGLVALMNS-----------  228 (312)
T ss_dssp             HHHCCCEEEEEECCEECTTCCTTCCCHHHHHHHHHHHTCCEEEESSSCCEEECEEHHHHHHHHHHHHTS-----------
T ss_pred             HHhCCcEEEEEeeeEECCCCCCCCccHHHHHHHHHHcCCCeEEeCCCCeeEccEEHHHHHHHHHHHHhh-----------
Confidence            345789999999999999863    46789999999999988899999999999999999999998862           


Q ss_pred             CCCCCccEEecCCCCCCHHHHHHHHHHhcCCCCCccccCHHHHHHHHHHHHHHHHhhhhccccccCCCCCCcHHhhhhhc
Q 017760          145 PIASGQPYFVSDGFPINTFEFIGPLLKTLDYDLPKSWLAVPHALFLGKVFSFFYSVLYPWLNRWWLPQPLILPAEVYKVG  224 (366)
Q Consensus       145 ~~~~g~~y~I~~~~~vs~~e~~~~l~~~lg~~~~~~~lp~~~~~~~a~~~e~~~~~~~~~~~~~~~~~p~l~~~ev~~~~  224 (366)
                        ..++.||+++++++++.|+++.+++.+|.+.+....|                            .+.   .+.    
T Consensus       229 --~~~~~~n~~~~~~~~~~~~~~~i~~~~~~~~~~~~~~----------------------------~~~---~~~----  271 (312)
T d2b69a1         229 --NVSSPVNLGNPEEHTILEFAQLIKNLVGSGSEIQFLS----------------------------EAQ---DDP----  271 (312)
T ss_dssp             --SCCSCEEESCCCEEEHHHHHHHHHHHHTCCCCEEEEC----------------------------CCT---TCC----
T ss_pred             --ccCCceEecCCcccchhhHHHHHHHHhCCCCceEECC----------------------------CCC---CCC----
Confidence              2456899999999999999999999999876543221                            111   111    


Q ss_pred             ccceecHHHHHHhcCCCCCCChHHHHHHHHHHHHhcc
Q 017760          225 VTHYFSLLKAKDELCYVPIVSPREGMAATISYWQDRK  261 (366)
Q Consensus       225 ~~~~~d~~ka~~~LG~~p~~~~~e~l~~~v~~~~~~~  261 (366)
                      .....|++|++++|||+|.++++++|+++++||+++.
T Consensus       272 ~~~~~d~~k~~~~lgw~p~~~l~~~I~~~i~w~~~~~  308 (312)
T d2b69a1         272 QKRKPDIKKAKLMLGWEPVVPLEEGLNKAIHYFRKEL  308 (312)
T ss_dssp             CCCCBCCHHHHHHHCCCCCSCHHHHHHHHHHHHHHHH
T ss_pred             CeeeECHHHHHHHHCCCCCCCHHHHHHHHHHHHHHHH
Confidence            1235799999999999999999999999999998754

>d1kewa_ c.2.1.2 (A:) dTDP-glucose 4,6-dehydratase (RmlB) {Streptococcus suis, serotype 2 [TaxId: 1307]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Tyrosine-dependent oxidoreductases
domain: dTDP-glucose 4,6-dehydratase (RmlB)
species: Streptococcus suis, serotype 2 [TaxId: 1307]

Probab=99.96  E-value=1.8e-29  Score=240.18  Aligned_cols=153  Identities=18%  Similarity=0.205  Sum_probs=119.4

Q ss_pred             CCceEEEEeCCccccCCCC--CCHHHHHHHHHcCCCCeeecCCCcceeceeHHHHHHHHHHHHhccccCCCCCCCCCCCC
Q 017760           71 KCLYTCAVRPAAIYGPGEE--RHLPRIVSLAKLGLVPFKIGEPSVKTDWIYVDNLVLALILASMGLLDDIPGQKGRPIAS  148 (366)
Q Consensus        71 ~~l~~~ilRp~~iyGp~~~--~~l~~~i~~~~~g~~~~~~g~~~~~~~~v~vdDla~a~~~a~~~l~~~~~~~~~~~~~~  148 (366)
                      .+++++++||++||||++.  ++++.++..+.+|+.+.++|+|++.++|+||+|+|+|+..+++.            ...
T Consensus       185 ~~i~~~~lR~~~vyGp~~~~~~~i~~~i~~~~~g~~~~v~g~g~~~r~~i~v~D~a~ai~~~~~~------------~~~  252 (361)
T d1kewa_         185 YGLPTIVTNCSNNYGPYHFPEKLIPLVILNALEGKPLPIYGKGDQIRDWLYVEDHARALHMVVTE------------GKA  252 (361)
T ss_dssp             HCCCEEEEEECEEESTTCCTTSHHHHHHHHHHHTCCEEEETTSCCEEEEEEHHHHHHHHHHHHHH------------CCT
T ss_pred             hCCCEEEEecCceECcCCCcCcHHHHHHHHHHcCCCcEEeCCCCeEEeCEEHHHHHHHHHHHHhc------------CCC
Confidence            4788999999999999874  56899999999999888889999999999999999999999973            245


Q ss_pred             CccEEecCCCCCCHHHHHHHHHHhcCCCCCccccCHHHHHHHHHHHHHHHHhhhhccccccCCCCCCcHHhhhhhcccce
Q 017760          149 GQPYFVSDGFPINTFEFIGPLLKTLDYDLPKSWLAVPHALFLGKVFSFFYSVLYPWLNRWWLPQPLILPAEVYKVGVTHY  228 (366)
Q Consensus       149 g~~y~I~~~~~vs~~e~~~~l~~~lg~~~~~~~lp~~~~~~~a~~~e~~~~~~~~~~~~~~~~~p~l~~~ev~~~~~~~~  228 (366)
                      +++|||+++++++..|+++.+.+.++...+...-...                       ........+.+    .....
T Consensus       253 ~~~~Ni~s~~~~s~~~~~~~i~~~~~~~~~~~~~~~~-----------------------~~~~~~~~~~~----~~~~~  305 (361)
T d1kewa_         253 GETYNIGGHNEKKNLDVVFTICDLLDEIVPKATSYRE-----------------------QITYVADRPGH----DRRYA  305 (361)
T ss_dssp             TCEEEECCCCEEEHHHHHHHHHHHHHHHSCCSSCGGG-----------------------GEEEECCCTTC----CCBCC
T ss_pred             CCeEEECCCCCcchHHHHhHhhhhcccccccccCccc-----------------------ceeecCCCCCC----Cceee
Confidence            7799999999999999999999887654332110000                       00000001111    11235


Q ss_pred             ecHHHHHHhcCCCCCCChHHHHHHHHHHHHhccc
Q 017760          229 FSLLKAKDELCYVPIVSPREGMAATISYWQDRKR  262 (366)
Q Consensus       229 ~d~~ka~~~LG~~p~~~~~e~l~~~v~~~~~~~~  262 (366)
                      .|++|++++|||+|.++++|+|++|++||++++.
T Consensus       306 ~d~~k~~~~lgw~P~~~l~e~i~~ti~w~~~n~~  339 (361)
T d1kewa_         306 IDAGKISRELGWKPLETFESGIRKTVEWYLANTQ  339 (361)
T ss_dssp             BCCHHHHHHHCCCCSCCHHHHHHHHHHHHHHCHH
T ss_pred             eCHHHHHHHHCCCCCCCHHHHHHHHHHHHHHhHH
Confidence            7999999999999999999999999999988754

>d2blla1 c.2.1.2 (A:316-657) Polymyxin resistance protein ArnA (PrmI) {Escherichia coli [TaxId: 562]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Tyrosine-dependent oxidoreductases
domain: Polymyxin resistance protein ArnA (PrmI)
species: Escherichia coli [TaxId: 562]

Probab=99.96  E-value=7e-29  Score=233.65  Aligned_cols=220  Identities=16%  Similarity=0.155  Sum_probs=163.1

Q ss_pred             CeEEEEcCCChhHHHHHHHHHHcCCceEEEEecCCCCcccccccCCCeEEEEcc--------------------------
Q 017760           12 KTFLVTGGLGHVGSALCLELVRRGAYQVRAFDLRTNSPWSHLLINHGVHCIQGL--------------------------   65 (366)
Q Consensus        12 ~~VlITGgtGfiG~~L~~~L~~~g~~~V~~~dr~~~~~~~~~~~~~~v~~i~gD--------------------------   65 (366)
                      |||||||||||+|++|+++|+++|.++|+++|+..+.. ......++++++++|                          
T Consensus         1 MKILITG~tGfiG~~l~~~Ll~~g~~~V~~ld~~~~~~-~~~~~~~~~~~i~~Di~~~~~~~~~~~~~~d~Vih~a~~~~   79 (342)
T d2blla1           1 MRVLILGVNGFIGNHLTERLLREDHYEVYGLDIGSDAI-SRFLNHPHFHFVEGDISIHSEWIEYHVKKCDVVLPLVAIAT   79 (342)
T ss_dssp             CEEEEETCSSHHHHHHHHHHHHSTTCEEEEEESCCGGG-GGGTTCTTEEEEECCTTTCSHHHHHHHHHCSEEEECBCCCC
T ss_pred             CEEEEECCCcHHHHHHHHHHHHCCCCEEEEEeCCCcch-hhhccCCCeEEEECccCChHHHHHHHHhCCCcccccccccc
Confidence            58999999999999999999999944899999865422 233345789999998                          


Q ss_pred             --------------------------------------------------------------------------------
Q 017760           66 --------------------------------------------------------------------------------   65 (366)
Q Consensus        66 --------------------------------------------------------------------------------   65 (366)
                                                                                                      
T Consensus        80 ~~~~~~~~~~~~~~nv~gt~~ll~~~~~~~~~~~~~ss~~~~~~~~~~~~~~~~~~~~~~~~~~p~~~Y~~sK~~~E~~~  159 (342)
T d2blla1          80 PIEYTRNPLRVFELDFEENLRIIRYCVKYRKRIIFPSTSEVYGMCSDKYFDEDHSNLIVGPVNKPRWIYSVSKQLLDRVI  159 (342)
T ss_dssp             HHHHHHSHHHHHHHHTHHHHHHHHHHHHTTCEEEEECCGGGGBTCCCSSBCTTTCCCBCCCTTCGGGHHHHHHHHHHHHH
T ss_pred             ccccccCCccccccccccccccccccccccccccccccccccccccccccccccccccccccCCCcchhhhcccchhhhh
Confidence                                                                                            


Q ss_pred             -ccCCCCCceEEEEeCCccccCCCCC----------CHHHHHHHHHcCCCCeeecCCCcceeceeHHHHHHHHHHHHhcc
Q 017760           66 -RKNNRKCLYTCAVRPAAIYGPGEER----------HLPRIVSLAKLGLVPFKIGEPSVKTDWIYVDNLVLALILASMGL  134 (366)
Q Consensus        66 -ks~~~~~l~~~ilRp~~iyGp~~~~----------~l~~~i~~~~~g~~~~~~g~~~~~~~~v~vdDla~a~~~a~~~l  134 (366)
                       +..+..+++++++||+.+|||+...          .++.++..+.+|+.+.++|+|++.++|+|++|+|+|+..+++.-
T Consensus       160 ~~~~~~~~~~~~i~r~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~g~~~r~~i~v~D~~~a~~~~~~~~  239 (342)
T d2blla1         160 WAYGEKEGLQFTLFRPFNWMGPRLDNLNAARIGSSRAITQLILNLVEGSPIKLIDGGKQKRCFTDIRDGIEALYRIIENA  239 (342)
T ss_dssp             HHHHHHHCCCEEEEEECSEECSSCCCTTCSBSCBCHHHHHHHHHHHHTCCEEEGGGSCCEEECEEHHHHHHHHHHHHHCG
T ss_pred             hhhhcccCceeEEeeccccccccccccccccccccccchHHHHHHHhCCCccccCCCCeeeeecccccccceeeeehhhc
Confidence             0012236889999999999996532          36788888999999888999999999999999999999999731


Q ss_pred             ccCCCCCCCCCCCCCccEEecCCC-CCCHHHHHHHHHHhcCCCCCccccCHHHHHHHHHHHHHHHHhhhhccccccCCCC
Q 017760          135 LDDIPGQKGRPIASGQPYFVSDGF-PINTFEFIGPLLKTLDYDLPKSWLAVPHALFLGKVFSFFYSVLYPWLNRWWLPQP  213 (366)
Q Consensus       135 ~~~~~~~~~~~~~~g~~y~I~~~~-~vs~~e~~~~l~~~lg~~~~~~~lp~~~~~~~a~~~e~~~~~~~~~~~~~~~~~p  213 (366)
                               .....|++|||++++ ++|+.|+++.+.+.+|.......+|.....                   ......
T Consensus       240 ---------~~~~~g~~~Nig~~~~~~t~~~l~~~i~~~~~~~~~~~~~~~~~~~-------------------~~~~~~  291 (342)
T d2blla1         240 ---------GNRCDGEIINIGNPENEASIEELGEMLLASFEKHPLRHHFPPFAGF-------------------RVVESS  291 (342)
T ss_dssp             ---------GGTTTTEEEEECCTTSEEEHHHHHHHHHHHHHTCTTGGGSCCCCCE-------------------EEC---
T ss_pred             ---------cccCCCeEEEEecccchhHHHHHHHHHHHHhCCCccccccCccccc-------------------ceeccc
Confidence                     234568899998765 589999999999999987665544311100                   000000


Q ss_pred             CCcHHhhhhhcccc-eecHHHHHHhcCCCCCCChHHHHHHHHHHHHhccc
Q 017760          214 LILPAEVYKVGVTH-YFSLLKAKDELCYVPIVSPREGMAATISYWQDRKR  262 (366)
Q Consensus       214 ~l~~~ev~~~~~~~-~~d~~ka~~~LG~~p~~~~~e~l~~~v~~~~~~~~  262 (366)
                      ....  .......+ ..|++|++++|||+|+++++|+|+++++||+++..
T Consensus       292 ~~~~--~~~~~~~~~~~d~~k~~~~lgw~P~~sleegl~~ti~~y~~~~~  339 (342)
T d2blla1         292 SYYG--KGYQDVEHRKPSIRNAHRCLDWEPKIDMQETIDETLDFFLRTVD  339 (342)
T ss_dssp             -----------CCCCCBCCHHHHHHHCCCCCCCHHHHHHHHHHHHHHHSC
T ss_pred             cccc--cccccccccccCHHHHHHHHCCCcCCCHHHHHHHHHHHHHhCcC
Confidence            0000  00001112 46999999999999999999999999999988764

>d1sb8a_ c.2.1.2 (A:) UDP-N-acetylglucosamine 4-epimerase WbpP {Pseudomonas aeruginosa [TaxId: 287]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Tyrosine-dependent oxidoreductases
domain: UDP-N-acetylglucosamine 4-epimerase WbpP
species: Pseudomonas aeruginosa [TaxId: 287]

Probab=99.96  E-value=3.8e-29  Score=235.63  Aligned_cols=211  Identities=20%  Similarity=0.171  Sum_probs=162.2

Q ss_pred             ccCCeEEEEcCCChhHHHHHHHHHHcCCceEEEEecCCCCccc---------ccccCCCeEEEEcc--------------
Q 017760            9 IEGKTFLVTGGLGHVGSALCLELVRRGAYQVRAFDLRTNSPWS---------HLLINHGVHCIQGL--------------   65 (366)
Q Consensus         9 ~~~~~VlITGgtGfiG~~L~~~L~~~g~~~V~~~dr~~~~~~~---------~~~~~~~v~~i~gD--------------   65 (366)
                      +++++|||||||||+|++|+++|+++| ++|+++|+.......         .....++++++.+|              
T Consensus        14 ~~~k~iLVTG~tGfIGs~lv~~L~~~g-~~V~~~d~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~d~~d~~~~~~~~~~~   92 (341)
T d1sb8a_          14 AQPKVWLITGVAGFIGSNLLETLLKLD-QKVVGLDNFATGHQRNLDEVRSLVSEKQWSNFKFIQGDIRNLDDCNNACAGV   92 (341)
T ss_dssp             HSCCEEEEETTTSHHHHHHHHHHHHTT-CEEEEEECCSSCCHHHHHHHHHHSCHHHHTTEEEEECCTTSHHHHHHHHTTC
T ss_pred             CCCCEEEEecCCCHHHHHHHHHHHHCc-CEEEEEECCCCcchhhHHHHHHhhhhcccCCeeEEeeccccccccccccccc
Confidence            456799999999999999999999999 599999985543211         11122567888888              


Q ss_pred             --------------------------------------------------------------------------------
Q 017760           66 --------------------------------------------------------------------------------   65 (366)
Q Consensus        66 --------------------------------------------------------------------------------   65 (366)
                                                                                                      
T Consensus        93 ~~v~~~~a~~~~~~~~~~~~~~~~~Nv~gt~~ll~~~~~~~~~~~i~~SS~~vyg~~~~~~~~E~~~~~p~~~Y~~sK~~  172 (341)
T d1sb8a_          93 DYVLHQAALGSVPRSINDPITSNATNIDGFLNMLIAARDAKVQSFTYAASSSTYGDHPGLPKVEDTIGKPLSPYAVTKYV  172 (341)
T ss_dssp             SEEEECCSCCCHHHHHHCHHHHHHHHTHHHHHHHHHHHHTTCSEEEEEEEGGGGTTCCCSSBCTTCCCCCCSHHHHHHHH
T ss_pred             cccccccccccccccccCccchhheeehhHHHHHHHHHhcCCceEEEcccceeeCCCCCCCccCCCCCCCCCcchHHHHH
Confidence                                                                                            


Q ss_pred             ------ccCCCCCceEEEEeCCccccCCCC------CCHHHHHHHHHcCCCCeeecCCCcceeceeHHHHHHHHHHHHhc
Q 017760           66 ------RKNNRKCLYTCAVRPAAIYGPGEE------RHLPRIVSLAKLGLVPFKIGEPSVKTDWIYVDNLVLALILASMG  133 (366)
Q Consensus        66 ------ks~~~~~l~~~ilRp~~iyGp~~~------~~l~~~i~~~~~g~~~~~~g~~~~~~~~v~vdDla~a~~~a~~~  133 (366)
                            ...+..+++++++||++||||++.      ..++.++..+.+|+.+.+.|+|.+.++|+||+|+|.|+..+++.
T Consensus       173 ~E~~~~~~~~~~~i~~~ilR~~~v~G~~~~~~~~~~~~i~~~~~~~~~g~~i~~~g~g~~~r~~i~v~D~~~a~~~~~~~  252 (341)
T d1sb8a_         173 NELYADVFSRCYGFSTIGLRYFNVFGRRQDPNGAYAAVIPKWTSSMIQGDDVYINGDGETSRDFCYIENTVQANLLAATA  252 (341)
T ss_dssp             HHHHHHHHHHHHCCCCEEEEECCEECTTCCCCSTTCCHHHHHHHHHHHTCCCEEESSSCCEECCEEHHHHHHHHHHHHTC
T ss_pred             HHHHHHHHHHHhCCCeEEEEeceeeccCcCCCCchhhhHHHHHHHHHcCCceEEcCCCCEEEEEEEEeccchhhhhhhhc
Confidence                  013445789999999999999763      35678888999999999999999999999999999999999863


Q ss_pred             cccCCCCCCCCCCCCCccEEecCCCCCCHHHHHHHHHHhcCCCCCccccCHHHHHHHHHHHHHHHHhhhhccccccCCCC
Q 017760          134 LLDDIPGQKGRPIASGQPYFVSDGFPINTFEFIGPLLKTLDYDLPKSWLAVPHALFLGKVFSFFYSVLYPWLNRWWLPQP  213 (366)
Q Consensus       134 l~~~~~~~~~~~~~~g~~y~I~~~~~vs~~e~~~~l~~~lg~~~~~~~lp~~~~~~~a~~~e~~~~~~~~~~~~~~~~~p  213 (366)
                                .....++.||++.++++|+.|+++.+.+.++.+........                          ...
T Consensus       253 ----------~~~~~~~~~~~~~~~~~si~~i~~~i~~~~~~~~~~~~~~~--------------------------~~~  296 (341)
T d1sb8a_         253 ----------GLDARNQVYNIAVGGRTSLNQLFFALRDGLAENGVSYHREP--------------------------VYR  296 (341)
T ss_dssp             ----------CGGGCSEEEEESCSCCEEHHHHHHHHHHHHHHTTCCCCCCC--------------------------EEE
T ss_pred             ----------cccccceeeeecccccchHHHHHHHHHHHhccccccccccc--------------------------ccc
Confidence                      33456889999999999999999999999985532211000                          000


Q ss_pred             CCcHHhhhhhcccceecHHHHHHhcCCCCCCChHHHHHHHHHHHHhc
Q 017760          214 LILPAEVYKVGVTHYFSLLKAKDELCYVPIVSPREGMAATISYWQDR  260 (366)
Q Consensus       214 ~l~~~ev~~~~~~~~~d~~ka~~~LG~~p~~~~~e~l~~~v~~~~~~  260 (366)
                      ...+.+.    .....|++|++++|||+|+++++++|+++++||++.
T Consensus       297 ~~~~~~~----~~~~~d~~k~~~~LGw~p~~sl~~gi~~ti~wy~~~  339 (341)
T d1sb8a_         297 DFREGDV----RHSLADISKAAKLLGYAPKYDVSAGVALAMPWYIMF  339 (341)
T ss_dssp             CCCTTCC----SBCCBCCHHHHHHTCCCCCCCHHHHHHHHHHHHHHH
T ss_pred             CCCCCCc----CeeeeCHHHHHHHHCCCcCCCHHHHHHHHHHHHHHh
Confidence            0011111    112469999999999999999999999999999863

>d1oc2a_ c.2.1.2 (A:) dTDP-glucose 4,6-dehydratase (RmlB) {Streptococcus suis, serotype 2 [TaxId: 1307]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Tyrosine-dependent oxidoreductases
domain: dTDP-glucose 4,6-dehydratase (RmlB)
species: Streptococcus suis, serotype 2 [TaxId: 1307]

Probab=99.96  E-value=4.1e-29  Score=235.97  Aligned_cols=147  Identities=19%  Similarity=0.260  Sum_probs=118.8

Q ss_pred             CCCceEEEEeCCccccCCC--CCCHHHHHHHHHcCCCCeeecCCCcceeceeHHHHHHHHHHHHhccccCCCCCCCCCCC
Q 017760           70 RKCLYTCAVRPAAIYGPGE--ERHLPRIVSLAKLGLVPFKIGEPSVKTDWIYVDNLVLALILASMGLLDDIPGQKGRPIA  147 (366)
Q Consensus        70 ~~~l~~~ilRp~~iyGp~~--~~~l~~~i~~~~~g~~~~~~g~~~~~~~~v~vdDla~a~~~a~~~l~~~~~~~~~~~~~  147 (366)
                      ..+++++++||++||||++  ...+..++..+..|..+.++|++++.++|+|++|+|++++.+++.            ..
T Consensus       176 ~~~i~~~ilR~~~vyGp~~~~~~~~~~~i~~~~~~~~~~i~~~g~~~r~~i~v~D~a~a~~~~~~~------------~~  243 (346)
T d1oc2a_         176 SFGVKATISNCSNNYGPYQHIEKFIPRQITNILAGIKPKLYGEGKNVRDWIHTNDHSTGVWAILTK------------GR  243 (346)
T ss_dssp             HHCCEEEEEEECCEESTTCCTTSHHHHHHHHHHHTCCCEEETTSCCEEECEEHHHHHHHHHHHHHH------------CC
T ss_pred             HcCCCEEEEeecceeCCCCCccchhHHHHHHHHcCCceeEeCCCCccccccchhhHHHHHHHHHhh------------cc
Confidence            3578999999999999976  356777888888888888999999999999999999999998863            45


Q ss_pred             CCccEEecCCCCCCHHHHHHHHHHhcCCCCCccccCHHHHHHHHHHHHHHHHhhhhccccccCCCCCCcHHhhhhhcccc
Q 017760          148 SGQPYFVSDGFPINTFEFIGPLLKTLDYDLPKSWLAVPHALFLGKVFSFFYSVLYPWLNRWWLPQPLILPAEVYKVGVTH  227 (366)
Q Consensus       148 ~g~~y~I~~~~~vs~~e~~~~l~~~lg~~~~~~~lp~~~~~~~a~~~e~~~~~~~~~~~~~~~~~p~l~~~ev~~~~~~~  227 (366)
                      .++.||++++++.+..|+++.+.+.++.+.+.+...                           +.+   +.+    ....
T Consensus       244 ~~~~~~~~~~~~~~~~~~~~~i~~~~~~~~~~~~~~---------------------------~~~---~~~----~~~~  289 (346)
T d1oc2a_         244 MGETYLIGADGEKNNKEVLELILEKMGQPKDAYDHV---------------------------TDR---AGH----DLRY  289 (346)
T ss_dssp             TTCEEEECCSCEEEHHHHHHHHHHHTTCCTTCSEEE---------------------------CCC---TTC----CCBC
T ss_pred             cCccccccccccccchHHHHHHHHHhCCCCcceEEC---------------------------CCC---CCC----Ccee
Confidence            577999999999999999999999999765433210                           111   111    1122


Q ss_pred             eecHHHHHHhcCCCCCC-ChHHHHHHHHHHHHhccc
Q 017760          228 YFSLLKAKDELCYVPIV-SPREGMAATISYWQDRKR  262 (366)
Q Consensus       228 ~~d~~ka~~~LG~~p~~-~~~e~l~~~v~~~~~~~~  262 (366)
                      ..|++|++++|||+|++ +++|+|+++++||+++..
T Consensus       290 ~~d~~k~~~~LGw~P~~t~l~e~i~~ti~w~~~n~~  325 (346)
T d1oc2a_         290 AIDASKLRDELGWTPQFTDFSEGLEETIQWYTDNQD  325 (346)
T ss_dssp             CBCCHHHHHHHCCCCSCCCHHHHHHHHHHHHHHTHH
T ss_pred             eeCHHHHHHHHCCCCcCCCHHHHHHHHHHHHHHHHH
Confidence            47999999999999987 699999999999998753

>d1rpna_ c.2.1.2 (A:) GDP-mannose 4,6-dehydratase {Pseudomonas aeruginosa [TaxId: 287]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Tyrosine-dependent oxidoreductases
domain: GDP-mannose 4,6-dehydratase
species: Pseudomonas aeruginosa [TaxId: 287]

Probab=99.96  E-value=1.3e-28  Score=229.51  Aligned_cols=205  Identities=21%  Similarity=0.220  Sum_probs=155.0

Q ss_pred             CeEEEEcCCChhHHHHHHHHHHcCCceEEEEecCCCCcccccc----cCCCeEEEEcc----------------------
Q 017760           12 KTFLVTGGLGHVGSALCLELVRRGAYQVRAFDLRTNSPWSHLL----INHGVHCIQGL----------------------   65 (366)
Q Consensus        12 ~~VlITGgtGfiG~~L~~~L~~~g~~~V~~~dr~~~~~~~~~~----~~~~v~~i~gD----------------------   65 (366)
                      ++|||||||||+|++|+++|+++| ++|++++|..+......+    ..++++++++|                      
T Consensus         1 k~vLItG~tGfiG~~l~~~Ll~~g-~~V~~~~r~~~~~~~~~l~~~~~~~~~~~~~~Dl~d~~~~~~~~~~~~~~~~~~~   79 (321)
T d1rpna_           1 RSALVTGITGQDGAYLAKLLLEKG-YRVHGLVARRSSDTRWRLRELGIEGDIQYEDGDMADACSVQRAVIKAQPQEVYNL   79 (321)
T ss_dssp             CEEEEETTTSHHHHHHHHHHHHTT-CEEEEEECCCSSCCCHHHHHTTCGGGEEEEECCTTCHHHHHHHHHHHCCSEEEEC
T ss_pred             CEEEEECCCCHHHHHHHHHHHHCc-CEEEEEECCCCcccHHHHHHhcccCCcEEEEccccChHHhhhhhccccccccccc
Confidence            589999999999999999999999 599999998765433221    23678999998                      


Q ss_pred             --------------------------------------------------------------------------------
Q 017760           66 --------------------------------------------------------------------------------   65 (366)
Q Consensus        66 --------------------------------------------------------------------------------   65 (366)
                                                                                                      
T Consensus        80 a~~~~~~~~~~~~~~~~~~n~~g~~~~l~~~~~~~~~~~~i~~Ss~~~~~~~~~~~~~E~~~~~p~~~Y~~sK~~~E~~~  159 (321)
T d1rpna_          80 AAQSFVGASWNQPVTTGVVDGLGVTHLLEAIRQFSPETRFYQASTSEMFGLIQAERQDENTPFYPRSPYGVAKLYGHWIT  159 (321)
T ss_dssp             CSCCCHHHHTTSHHHHHHHHTHHHHHHHHHHHHHCTTSEEEEEEEGGGGCSCSSSSBCTTSCCCCCSHHHHHHHHHHHHH
T ss_pred             cccccccccccchHHHHhhhhhchHHHHHHHHHhCCCcccccccchhhcCcccCCCCCCCCCccccChhHHHHHHHHHHH
Confidence                                                                                            


Q ss_pred             -ccCCCCCceEEEEeCCccccCCCC-CC----HHHHHHHHHcCC-CCeeecCCCcceeceeHHHHHHHHHHHHhccccCC
Q 017760           66 -RKNNRKCLYTCAVRPAAIYGPGEE-RH----LPRIVSLAKLGL-VPFKIGEPSVKTDWIYVDNLVLALILASMGLLDDI  138 (366)
Q Consensus        66 -ks~~~~~l~~~ilRp~~iyGp~~~-~~----l~~~i~~~~~g~-~~~~~g~~~~~~~~v~vdDla~a~~~a~~~l~~~~  138 (366)
                       ......+++++++||+++|||... ..    +..++..+..|. .....|++++.++|+|++|+|++++.+++.     
T Consensus       160 ~~~~~~~~~~~~~lr~~~vyGp~~~~~~~~~~i~~~~~~~~~~~~~~i~~g~g~~~r~~i~v~D~~~~~~~~~~~-----  234 (321)
T d1rpna_         160 VNYRESFGLHASSGILFNHESPLRGIEFVTRKVTDAVARIKLGKQQELRLGNVDAKRDWGFAGDYVEAMWLMLQQ-----  234 (321)
T ss_dssp             HHHHHHHCCCEEEEEECCEECTTSCTTSHHHHHHHHHHHHHTTSCSCEEESCTTCEEECEEHHHHHHHHHHHHHS-----
T ss_pred             HHHHhhcCCcEEEEEEecccCCCccccccHHHHHHHHHHHHhCCCCcEEECCCCeEEccEEeHHHHHHHHHHHhc-----
Confidence             013345789999999999999642 22    333444455544 445679999999999999999999999972     


Q ss_pred             CCCCCCCCCCCccEEecCCCCCCHHHHHHHHHHhcCCCCCccccCHHHHHHHHHHHHHHHHhhhhccccccCCCCCCcHH
Q 017760          139 PGQKGRPIASGQPYFVSDGFPINTFEFIGPLLKTLDYDLPKSWLAVPHALFLGKVFSFFYSVLYPWLNRWWLPQPLILPA  218 (366)
Q Consensus       139 ~~~~~~~~~~g~~y~I~~~~~vs~~e~~~~l~~~lg~~~~~~~lp~~~~~~~a~~~e~~~~~~~~~~~~~~~~~p~l~~~  218 (366)
                            +  .++.||++++++.|+.++++.+.+.+|.+.+...-+                           .+....+.
T Consensus       235 ------~--~~~~~ni~~~~~~s~~~~~~~~~~~~~~~~~~~~~~---------------------------~~~~~rp~  279 (321)
T d1rpna_         235 ------D--KADDYVVATGVTTTVRDMCQIAFEHVGLDYRDFLKI---------------------------DPAFFRPA  279 (321)
T ss_dssp             ------S--SCCCEEECCSCEEEHHHHHHHHHHTTTCCGGGTEEE---------------------------CGGGCCSS
T ss_pred             ------C--CcCCceecccccceehhhhHHHHHHhCCCccceeec---------------------------CCCCCCCC
Confidence                  2  356799999999999999999999999764422100                           11111122


Q ss_pred             hhhhhcccceecHHHHHHhcCCCCCCChHHHHHHHHHHHHhcc
Q 017760          219 EVYKVGVTHYFSLLKAKDELCYVPIVSPREGMAATISYWQDRK  261 (366)
Q Consensus       219 ev~~~~~~~~~d~~ka~~~LG~~p~~~~~e~l~~~v~~~~~~~  261 (366)
                      +.    .....|++|++++|||+|+++++|+|++|++|+.++.
T Consensus       280 ~~----~~~~~d~~k~~k~lG~~P~~~l~e~i~~tv~~~l~~~  318 (321)
T d1rpna_         280 EV----DVLLGNPAKAQRVLGWKPRTSLDELIRMMVEADLRRV  318 (321)
T ss_dssp             CC----CBCCBCTHHHHHHHCCCCCSCHHHHHHHHHHHHHHHH
T ss_pred             cc----CCccCCHHHHHHHHCCCcCCCHHHHHHHHHHHHHHHh
Confidence            21    1125699999999999999999999999999987753

>d2c5aa1 c.2.1.2 (A:13-375) GDP-mannose-3', 5'-epimerase {Thale cress (Arabidopsis thaliana) [TaxId: 3702]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Tyrosine-dependent oxidoreductases
domain: GDP-mannose-3', 5'-epimerase
species: Thale cress (Arabidopsis thaliana) [TaxId: 3702]

Probab=99.96  E-value=5.3e-28  Score=229.51  Aligned_cols=203  Identities=16%  Similarity=0.087  Sum_probs=156.2

Q ss_pred             cccCCeEEEEcCCChhHHHHHHHHHHcCCceEEEEecCCCCcccccccCCCeEEEEcc----------------------
Q 017760            8 GIEGKTFLVTGGLGHVGSALCLELVRRGAYQVRAFDLRTNSPWSHLLINHGVHCIQGL----------------------   65 (366)
Q Consensus         8 ~~~~~~VlITGgtGfiG~~L~~~L~~~g~~~V~~~dr~~~~~~~~~~~~~~v~~i~gD----------------------   65 (366)
                      +.+.|||||||||||||++|++.|+++| |+|+++|+.........  ....++..+|                      
T Consensus        12 ~~~nMKILVTGgsGfIGs~lv~~L~~~g-~~V~~~d~~~~~~~~~~--~~~~~~~~~D~~~~~~~~~~~~~~d~Vih~a~   88 (363)
T d2c5aa1          12 PSENLKISITGAGGFIASHIARRLKHEG-HYVIASDWKKNEHMTED--MFCDEFHLVDLRVMENCLKVTEGVDHVFNLAA   88 (363)
T ss_dssp             TTSCCEEEEETTTSHHHHHHHHHHHHTT-CEEEEEESSCCSSSCGG--GTCSEEEECCTTSHHHHHHHHTTCSEEEECCC
T ss_pred             CCCCCEEEEECCCCHHHHHHHHHHHHCc-CEEEEEeCCCccchhhh--cccCcEEEeechhHHHHHHHhhcCCeEeeccc
Confidence            3456899999999999999999999999 69999998765543222  2334555555                      


Q ss_pred             --------------------------------------------------------------------------------
Q 017760           66 --------------------------------------------------------------------------------   65 (366)
Q Consensus        66 --------------------------------------------------------------------------------   65 (366)
                                                                                                      
T Consensus        89 ~~~~~~~~~~~~~~~~~~n~~gt~~ll~~~~~~~vk~~i~~SS~~~~~~~~~~~~~~~~~~~~e~~~~~p~~~Yg~sK~~  168 (363)
T d2c5aa1          89 DMGGMGFIQSNHSVIMYNNTMISFNMIEAARINGIKRFFYASSACIYPEFKQLETTNVSLKESDAWPAEPQDAFGLEKLA  168 (363)
T ss_dssp             CCCCHHHHTTCHHHHHHHHHHHHHHHHHHHHHTTCSEEEEEEEGGGSCGGGSSSSSSCEECGGGGSSBCCSSHHHHHHHH
T ss_pred             ccccccccccccccccccccchhhHHHHhHHhhCccccccccccccccccccccccccccccccCCcCCCCCHHHHHHHH
Confidence                                                                                            


Q ss_pred             ------ccCCCCCceEEEEeCCccccCCCCC-----C--HHHHHHHHHcCCCCeeecCCCcceeceeHHHHHHHHHHHHh
Q 017760           66 ------RKNNRKCLYTCAVRPAAIYGPGEER-----H--LPRIVSLAKLGLVPFKIGEPSVKTDWIYVDNLVLALILASM  132 (366)
Q Consensus        66 ------ks~~~~~l~~~ilRp~~iyGp~~~~-----~--l~~~i~~~~~g~~~~~~g~~~~~~~~v~vdDla~a~~~a~~  132 (366)
                            ...+..+++++++||+++|||++..     .  ................+|+|++.++|+|++|+++++..+++
T Consensus       169 ~E~~~~~~~~~~gl~~~ilR~~~vyG~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~g~~~rd~i~v~D~~~~~~~~~~  248 (363)
T d2c5aa1         169 TEELCKHYNKDFGIECRIGRFHNIYGPFGTWKGGREKAPAAFCRKAQTSTDRFEMWGDGLQTRSFTFIDECVEGVLRLTK  248 (363)
T ss_dssp             HHHHHHHHHHHHCCEEEEEEECCEECTTSCCSSSCCCHHHHHHHHHHHCSSCEEEESCSCCEECCEEHHHHHHHHHHHHH
T ss_pred             HHHHHHHHHHHhCCCEEEEEeeeEeccCCcccccccccccccccccccccccccccCCCCeEEEEeehhHHHHHHHHHHh
Confidence                  0012347899999999999998631     1  12333344555666778999999999999999999999886


Q ss_pred             ccccCCCCCCCCCCCCCccEEecCCCCCCHHHHHHHHHHhcCCCCCccccCHHHHHHHHHHHHHHHHhhhhccccccCCC
Q 017760          133 GLLDDIPGQKGRPIASGQPYFVSDGFPINTFEFIGPLLKTLDYDLPKSWLAVPHALFLGKVFSFFYSVLYPWLNRWWLPQ  212 (366)
Q Consensus       133 ~l~~~~~~~~~~~~~~g~~y~I~~~~~vs~~e~~~~l~~~lg~~~~~~~lp~~~~~~~a~~~e~~~~~~~~~~~~~~~~~  212 (366)
                                 .  ..+++||++++.++|+.|+++.+.+.+|.+.+....|                            .
T Consensus       249 -----------~--~~~~~~ni~~~~~~s~~~l~~~i~~~~g~~~~i~~~~----------------------------~  287 (363)
T d2c5aa1         249 -----------S--DFREPVNIGSDEMVSMNEMAEMVLSFEEKKLPIHHIP----------------------------G  287 (363)
T ss_dssp             -----------S--SCCSCEEECCCCCEEHHHHHHHHHHTTTCCCCEEEEC----------------------------C
T ss_pred             -----------C--CCCCeEEEecCCcccHHHHHHHHHHHhCCCCceEeCC----------------------------C
Confidence                       2  3567999999999999999999999999887654332                            2


Q ss_pred             CCCcHHhhhhhcccceecHHHHHHhcCCCCCCChHHHHHHHHHHHHhccc
Q 017760          213 PLILPAEVYKVGVTHYFSLLKAKDELCYVPIVSPREGMAATISYWQDRKR  262 (366)
Q Consensus       213 p~l~~~ev~~~~~~~~~d~~ka~~~LG~~p~~~~~e~l~~~v~~~~~~~~  262 (366)
                      |.    +    ......|++|++++|||+|.++++++|++|++||+++..
T Consensus       288 ~~----~----~~~~~~d~ska~~~LGw~p~~sleegi~~ti~w~~~~~~  329 (363)
T d2c5aa1         288 PE----G----VRGRNSDNNLIKEKLGWAPNMRLKEGLRITYFWIKEQIE  329 (363)
T ss_dssp             CC----C----CSBCEECCHHHHHHHSCCCCCCHHHHHHHHHHHHHHHHH
T ss_pred             CC----C----ccccccCHHHHHHHhCCCCCCCHHHHHHHHHHHHHHHHH
Confidence            11    0    112357999999999999999999999999999987644

>d1udca_ c.2.1.2 (A:) Uridine diphosphogalactose-4-epimerase (UDP-galactose 4-epimerase) {Escherichia coli [TaxId: 562]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Tyrosine-dependent oxidoreductases
domain: Uridine diphosphogalactose-4-epimerase (UDP-galactose 4-epimerase)
species: Escherichia coli [TaxId: 562]

Probab=99.94  E-value=5.3e-27  Score=220.67  Aligned_cols=207  Identities=19%  Similarity=0.179  Sum_probs=157.0

Q ss_pred             CeEEEEcCCChhHHHHHHHHHHcCCceEEEEecCCCCccc-----ccccCCCeEEEEcc---------------------
Q 017760           12 KTFLVTGGLGHVGSALCLELVRRGAYQVRAFDLRTNSPWS-----HLLINHGVHCIQGL---------------------   65 (366)
Q Consensus        12 ~~VlITGgtGfiG~~L~~~L~~~g~~~V~~~dr~~~~~~~-----~~~~~~~v~~i~gD---------------------   65 (366)
                      |||||||||||+|++|++.|+++| ++|+++|+.......     .....++++++++|                     
T Consensus         1 MKiLItG~tGfIG~~l~~~L~~~g-~~V~~~d~~~~~~~~~~~~~~~~~~~~~~~~~~Dl~d~~~l~~~~~~~~~d~ViH   79 (338)
T d1udca_           1 MRVLVTGGSGYIGSHTCVQLLQNG-HDVIILDNLCNSKRSVLPVIERLGGKHPTFVEGDIRNEALMTEILHDHAIDTVIH   79 (338)
T ss_dssp             CEEEEETTTSHHHHHHHHHHHHTT-CEEEEEECCSSCCTTHHHHHHHHHTSCCEEEECCTTCHHHHHHHHHHTTCSEEEE
T ss_pred             CEEEEECCCCHHHHHHHHHHHHCc-CEEEEEECCCCcchhhHHHHHhhcCCCCEEEEeecCCHHHHHHHHhccCCCEEEE
Confidence            679999999999999999999999 599999975433221     22334678999999                     


Q ss_pred             --------------------------------------------------------------------------------
Q 017760           66 --------------------------------------------------------------------------------   65 (366)
Q Consensus        66 --------------------------------------------------------------------------------   65 (366)
                                                                                                      
T Consensus        80 lAa~~~~~~~~~~~~~~~~~Nv~gt~nlL~~~~~~~v~~~i~~Ss~~vy~~~~~~~~~e~~~~~~p~~~Y~~sK~~~e~~  159 (338)
T d1udca_          80 FAGLKAVGESVQKPLEYYDNNVNGTLRLISAMRAANVKNFIFSSSATVYGDQPKIPYVESFPTGTPQSPYGKSKLMVEQI  159 (338)
T ss_dssp             CCSCCCHHHHHHCHHHHHHHHHHHHHHHHHHHHHHTCCEEEEEEEGGGGCSCCSSSBCTTSCCCCCSSHHHHHHHHHHHH
T ss_pred             CCCccchhhHHhCHHHHHHhHHHHHHHHHHHHHHhCCCEEEecCcceEEccccccccccccccCCCcchHHHHHhhhhHH
Confidence                                                                                            


Q ss_pred             ---ccCCCCCceEEEEeCCccccCCCC------------CCHHHHHHHHHcC-CCCeeec------CCCcceeceeHHHH
Q 017760           66 ---RKNNRKCLYTCAVRPAAIYGPGEE------------RHLPRIVSLAKLG-LVPFKIG------EPSVKTDWIYVDNL  123 (366)
Q Consensus        66 ---ks~~~~~l~~~ilRp~~iyGp~~~------------~~l~~~i~~~~~g-~~~~~~g------~~~~~~~~v~vdDl  123 (366)
                         ......+++++++||+++|||++.            ..++.++..+..+ ..+.+.|      ++++.+||+|++|+
T Consensus       160 ~~~~~~~~~~~~~~ilR~~~v~G~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~i~i~g~~~~~~~g~~~rd~i~v~D~  239 (338)
T d1udca_         160 LTDLQKAQPDWSIALLRYFNPVGAHPSGDMGEDPQGIPNNLMPYIAQVAVGRRDSLAIFGNDYPTEDGTGVRDYIHVMDL  239 (338)
T ss_dssp             HHHHHHHSTTCEEEEEEECEEECCCTTSSSCCCCCSSCCSHHHHHHHHHTTSSSCEEEECSCSSSTTSSCEECEEEHHHH
T ss_pred             HHHHHhhccCCeEEEEeeccEEeccCCCCCCCCccccHHHHHHHHHHHHhcCCCCEEEeCCCcccCCCCceeeEEEEeeh
Confidence               013346889999999999999652            2345566655444 3444445      47788999999999


Q ss_pred             HHHHHHHHhccccCCCCCCCCCCCCCccEEecCCCCCCHHHHHHHHHHhcCCCCCccccCHHHHHHHHHHHHHHHHhhhh
Q 017760          124 VLALILASMGLLDDIPGQKGRPIASGQPYFVSDGFPINTFEFIGPLLKTLDYDLPKSWLAVPHALFLGKVFSFFYSVLYP  203 (366)
Q Consensus       124 a~a~~~a~~~l~~~~~~~~~~~~~~g~~y~I~~~~~vs~~e~~~~l~~~lg~~~~~~~lp~~~~~~~a~~~e~~~~~~~~  203 (366)
                      ++++..+.+.+..         ...+++||+++++++|+.|+++.+.+.+|.+.+....|                    
T Consensus       240 ~~~~~~~~~~~~~---------~~~~~i~Ni~~~~~~si~e~~~~i~~~~g~~~~~~~~~--------------------  290 (338)
T d1udca_         240 ADGHVVAMEKLAN---------KPGVHIYNLGAGVGNSVLDVVNAFSKACGKPVNYHFAP--------------------  290 (338)
T ss_dssp             HHHHHHHHHHHTT---------CCEEEEEEESCSSCEEHHHHHHHHHHHHTSCCCEEEEC--------------------
T ss_pred             hhhcccccccccc---------ccCcceeeecCCCCCcHHHHHHHHHHHHCCCCceEECC--------------------
Confidence            9999888864322         34568999999999999999999999999776643221                    


Q ss_pred             ccccccCCCCCCcHHhhhhhcccceecHHHHHHhcCCCCCCChHHHHHHHHHHHHhcccc
Q 017760          204 WLNRWWLPQPLILPAEVYKVGVTHYFSLLKAKDELCYVPIVSPREGMAATISYWQDRKRK  263 (366)
Q Consensus       204 ~~~~~~~~~p~l~~~ev~~~~~~~~~d~~ka~~~LG~~p~~~~~e~l~~~v~~~~~~~~~  263 (366)
                              .   .+.+.    .....|++|++++|||+|.++++++|+++++||+++.+.
T Consensus       291 --------~---~~~~~----~~~~~d~~k~~~~lgwkp~~~l~egi~~ti~w~~~~~~~  335 (338)
T d1udca_         291 --------R---REGDL----PAYWADASKADRELNWRVTRTLDEMAQDTWHWQSRHPQG  335 (338)
T ss_dssp             --------C---CTTCC----SBCCBCCHHHHHHHCCCCCCCHHHHHHHHHHHHHHCTTC
T ss_pred             --------C---CCCCC----CEeeECHHHHHHHHCCCcCCCHHHHHHHHHHHHHhchhh
Confidence                    1   11111    112579999999999999999999999999999998653

>d1db3a_ c.2.1.2 (A:) GDP-mannose 4,6-dehydratase {Escherichia coli [TaxId: 562]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Tyrosine-dependent oxidoreductases
domain: GDP-mannose 4,6-dehydratase
species: Escherichia coli [TaxId: 562]

Probab=99.94  E-value=8e-28  Score=228.25  Aligned_cols=220  Identities=19%  Similarity=0.199  Sum_probs=147.1

Q ss_pred             CeEEEEcCCChhHHHHHHHHHHcCCceEEEEecCCCCccc---------ccccCCCeEEEEcc-----------------
Q 017760           12 KTFLVTGGLGHVGSALCLELVRRGAYQVRAFDLRTNSPWS---------HLLINHGVHCIQGL-----------------   65 (366)
Q Consensus        12 ~~VlITGgtGfiG~~L~~~L~~~g~~~V~~~dr~~~~~~~---------~~~~~~~v~~i~gD-----------------   65 (366)
                      ++|||||||||+|++|+++|+++| ++|+++||..+....         .....++++++++|                 
T Consensus         2 K~vLITGatGfiGs~lv~~Ll~~g-~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~~~~~Dl~d~~~~~~~~~~~~~d   80 (357)
T d1db3a_           2 KVALITGVTGQDGSYLAEFLLEKG-YEVHGIKRRASSFNTERVDHIYQDPHTCNPKFHLHYGDLSDTSNLTRILREVQPD   80 (357)
T ss_dssp             CEEEEETTTSHHHHHHHHHHHHTT-CEEEEECC---------------------CCEEECCCCSSCHHHHHHHHHHHCCS
T ss_pred             CEEEEeCCCcHHHHHHHHHHHHCc-CEEEEEECCCcccchhhHHHHHhhhhhcCCCeEEEEeecCCHHHHHHHHhccCCC
Confidence            678999999999999999999999 599999996542211         11223577888887                 


Q ss_pred             --------------------------------------------------------------------------------
Q 017760           66 --------------------------------------------------------------------------------   65 (366)
Q Consensus        66 --------------------------------------------------------------------------------   65 (366)
                                                                                                      
T Consensus        81 ~v~h~aa~~~~~~~~~~~~~~~~~Nv~gt~nllea~~~~~~~~~~r~i~~SS~~vYG~~~~~~~~E~~~~~P~~~Y~~sK  160 (357)
T d1db3a_          81 EVYNLGAMSHVAVSFESPEYTADVDAMGTLRLLEAIRFLGLEKKTRFYQASTSELYGLVQEIPQKETTPFYPRSPYAVAK  160 (357)
T ss_dssp             EEEECCCCCTTTTTTSCHHHHHHHHTHHHHHHHHHHHHTTCTTTCEEEEEEEGGGGTTCCSSSBCTTSCCCCCSHHHHHH
T ss_pred             EEEEeecccccchhhhCHHHHHHHHHHHHHHHHHHHHHhCCCCCcEEEEEEchhhhCCCCCCCcCCCCCCCCCChHHHHH
Confidence                                                                                            


Q ss_pred             --------ccCCCCCceEEEEeCCccccCCCC-C----CHHHHHHHHHcCC-CCeeecCCCcceeceeHHHHHHHHHHHH
Q 017760           66 --------RKNNRKCLYTCAVRPAAIYGPGEE-R----HLPRIVSLAKLGL-VPFKIGEPSVKTDWIYVDNLVLALILAS  131 (366)
Q Consensus        66 --------ks~~~~~l~~~ilRp~~iyGp~~~-~----~l~~~i~~~~~g~-~~~~~g~~~~~~~~v~vdDla~a~~~a~  131 (366)
                              ...+..+++++++||+++|||+.. .    .+...+..+..+. .....|++++.++|+||+|+|+++.+++
T Consensus       161 ~~~E~~~~~~~~~~~l~~~ilR~~~vyGp~~~~~~~~~~i~~~~~~~~~~~~~~~~~g~~~~~r~~~~v~D~~~a~~~~~  240 (357)
T d1db3a_         161 LYAYWITVNYRESYGMYACNGILFNHESPRRGETFVTRKITRAIANIAQGLESCLYLGNMDSLRDWGHAKDYVKMQWMML  240 (357)
T ss_dssp             HHHHHHHHHHHHHHCCCEEEEEECCEECTTSCTTSHHHHHHHHHHHHHTTSCCCEEESCTTCEECCEEHHHHHHHHHHTT
T ss_pred             HHHHHHHHHHHHHhCCCEEEEEeccccCCCCCcCCCchHHHHHHHHHHhCCCceEEECCCCeeecceeechHHHHHHHHH
Confidence                    002334789999999999999753 2    2334444445554 4566799999999999999999999988


Q ss_pred             hccccCCCCCCCCCCCCCccEEecCCCCCCHHHHHHHHHHhcCCCCCccccCHHHHHHHHHHHHHHHHhhhhccccccCC
Q 017760          132 MGLLDDIPGQKGRPIASGQPYFVSDGFPINTFEFIGPLLKTLDYDLPKSWLAVPHALFLGKVFSFFYSVLYPWLNRWWLP  211 (366)
Q Consensus       132 ~~l~~~~~~~~~~~~~~g~~y~I~~~~~vs~~e~~~~l~~~lg~~~~~~~lp~~~~~~~a~~~e~~~~~~~~~~~~~~~~  211 (366)
                      +           .  ..++.|||++++++|+.|+++.+.+.+|...+....+....              ..........
T Consensus       241 ~-----------~--~~~~~yni~sg~~~s~~~~~~~~~~~~g~~~~~~~~~~~~~--------------~~~~~~~~~~  293 (357)
T d1db3a_         241 Q-----------Q--EQPEDFVIATGVQYSVRQFVEMAAAQLGIKLRFEGTGVEEK--------------GIVVSVTGHD  293 (357)
T ss_dssp             S-----------S--SSCCCEEECCCCCEEHHHHHHHHHHTTTEEEEEESCGGGCE--------------EEEEEECSSS
T ss_pred             h-----------C--CCCCeEEECCCCceehHHHHHHHHHHhCCcccccccccccc--------------chhhhhhccc
Confidence            6           2  35689999999999999999999999985433211110000              0000000001


Q ss_pred             CCCCcHHhh---------hhhcccc-eecHHHHHHhcCCCCCCChHHHHHHHHHHHHh
Q 017760          212 QPLILPAEV---------YKVGVTH-YFSLLKAKDELCYVPIVSPREGMAATISYWQD  259 (366)
Q Consensus       212 ~p~l~~~ev---------~~~~~~~-~~d~~ka~~~LG~~p~~~~~e~l~~~v~~~~~  259 (366)
                      .+...+...         +...... .+|++|++++|||+|+++++|+|+++++++.+
T Consensus       294 ~~~~~~~~~~~~~~~~~~r~~~~~~~~~d~skakk~LGw~P~~sl~egI~~~I~~~l~  351 (357)
T d1db3a_         294 APGVKPGDVIIAVDPRYFRPAEVETLLGDPTKAHEKLGWKPEITLREMVSEMVANDLE  351 (357)
T ss_dssp             CTTCCTTCEEEEECGGGCCCCC-CCCCBCCHHHHHHHCCCCCSCHHHHHHHHHHHHHH
T ss_pred             ccccccCceeEeeccccCCCccccccccCHHHHHHHHCCCcCCCHHHHHHHHHHHHHH
Confidence            111111100         0011112 46999999999999999999999999987654

>d1n7ha_ c.2.1.2 (A:) GDP-mannose 4,6-dehydratase {Thale-cress (Arabidopsis thaliana) [TaxId: 3702]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Tyrosine-dependent oxidoreductases
domain: GDP-mannose 4,6-dehydratase
species: Thale-cress (Arabidopsis thaliana) [TaxId: 3702]

Probab=99.94  E-value=9.2e-27  Score=218.34  Aligned_cols=206  Identities=19%  Similarity=0.149  Sum_probs=148.2

Q ss_pred             CCeEEEEcCCChhHHHHHHHHHHcCCceEEEEecCCCCccc----------ccccCCCeEEEEcc---------------
Q 017760           11 GKTFLVTGGLGHVGSALCLELVRRGAYQVRAFDLRTNSPWS----------HLLINHGVHCIQGL---------------   65 (366)
Q Consensus        11 ~~~VlITGgtGfiG~~L~~~L~~~g~~~V~~~dr~~~~~~~----------~~~~~~~v~~i~gD---------------   65 (366)
                      ++++||||||||+|++|++.|+++| |+|+++||..+....          .......++++.+|               
T Consensus         1 ~k~~LVTGatGfiG~~lv~~Ll~~g-~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~Di~~~~~~~~~~~~~~   79 (339)
T d1n7ha_           1 RKIALITGITGQDGSYLTEFLLGKG-YEVHGLIRRSSNFNTQRINHIYIDPHNVNKALMKLHYADLTDASSLRRWIDVIK   79 (339)
T ss_dssp             CCEEEEETTTSHHHHHHHHHHHHTT-CEEEEEECCCSSCCCTTTTTTC--------CCEEEEECCTTCHHHHHHHHHHHC
T ss_pred             CCEEEEeCCccHHHHHHHHHHHHCc-CEEEEEECCCcccchhhhhhhhhhhhhccccceEEEEccccCHHHHHHHHhhhc
Confidence            3789999999999999999999999 599999997542111          11123456777887               


Q ss_pred             --------------------------------------------------------------------------------
Q 017760           66 --------------------------------------------------------------------------------   65 (366)
Q Consensus        66 --------------------------------------------------------------------------------   65 (366)
                                                                                                      
T Consensus        80 ~D~Vih~Aa~~~~~~~~~~p~~~~~~n~~~~~~~~~~~~~~~~~~~~~~~~~~~ss~~~~~~~~~~~~E~~~~~p~~~Y~  159 (339)
T d1n7ha_          80 PDEVYNLAAQSHVAVSFEIPDYTADVVATGALRLLEAVRSHTIDSGRTVKYYQAGSSEMFGSTPPPQSETTPFHPRSPYA  159 (339)
T ss_dssp             CSEEEECCSCCCHHHHHHSHHHHHHHHTHHHHHHHHHHHHHHHHHCCCCEEEEEEEGGGGTTSCSSBCTTSCCCCCSHHH
T ss_pred             cchhhhccccccccccccCccccccccccccchhhhhhhhcccccccceeeeecccceecccCCCCCCCCCCCCCcchhh
Confidence                                                                                            


Q ss_pred             -----------ccCCCCCceEEEEeCCccccCCCCC-CHH----HHHHHH-HcCCCCeeecCCCcceeceeHHHHHHHHH
Q 017760           66 -----------RKNNRKCLYTCAVRPAAIYGPGEER-HLP----RIVSLA-KLGLVPFKIGEPSVKTDWIYVDNLVLALI  128 (366)
Q Consensus        66 -----------ks~~~~~l~~~ilRp~~iyGp~~~~-~l~----~~i~~~-~~g~~~~~~g~~~~~~~~v~vdDla~a~~  128 (366)
                                 ...+..+++++++||++||||+... ...    ..+... .........|++.+.++|+|++|+++++.
T Consensus       160 ~sK~~~E~~~~~~~~~~~~~~~ilR~~~vyGp~~~~~~~~~~i~~~~~~~~~~~~~~~~~g~~~~~rd~~~v~D~a~~~~  239 (339)
T d1n7ha_         160 ASKCAAHWYTVNYREAYGLFACNGILFNHESPRRGENFVTRKITRALGRIKVGLQTKLFLGNLQASRDWGFAGDYVEAMW  239 (339)
T ss_dssp             HHHHHHHHHHHHHHHHHCCEEEEEEECCEECTTSCTTSHHHHHHHHHHHHHHTSCCCEEESCTTCEEECEEHHHHHHHHH
T ss_pred             HHHHHHHHHHHHHHHHhCCCEEEEEEccccCCCCCCCCCcchhhHHHHHHhcCCCCeEEeCCCCccccceeeehHHHHHH
Confidence                       1134458999999999999997542 222    222233 33445566789999999999999999999


Q ss_pred             HHHhccccCCCCCCCCCCCCCccEEecCCCCCCHHHHHHHHHHhcCCCCCccccCHHHHHHHHHHHHHHHHhhhhccccc
Q 017760          129 LASMGLLDDIPGQKGRPIASGQPYFVSDGFPINTFEFIGPLLKTLDYDLPKSWLAVPHALFLGKVFSFFYSVLYPWLNRW  208 (366)
Q Consensus       129 ~a~~~l~~~~~~~~~~~~~~g~~y~I~~~~~vs~~e~~~~l~~~lg~~~~~~~lp~~~~~~~a~~~e~~~~~~~~~~~~~  208 (366)
                      ++++           .+  .+..+++..+.+.+..|+++.+.+.+|...+....                      .   
T Consensus       240 ~~~~-----------~~--~~~~~~~~~~~~~s~~~~~~~~~~~~~~~~~~~~~----------------------~---  281 (339)
T d1n7ha_         240 LMLQ-----------QE--KPDDYVVATEEGHTVEEFLDVSFGYLGLNWKDYVE----------------------I---  281 (339)
T ss_dssp             HHHT-----------SS--SCCEEEECCSCEEEHHHHHHHHHHHTTCCGGGTEE----------------------E---
T ss_pred             HHHh-----------cC--CCCccccccccccccchhhhhhhhhhhcccCceee----------------------e---
Confidence            9997           22  23456777888899999999999999976432210                      0   


Q ss_pred             cCCCCCCcHHhhhhhcccceecHHHHHHhcCCCCCCChHHHHHHHHHHHHhcc
Q 017760          209 WLPQPLILPAEVYKVGVTHYFSLLKAKDELCYVPIVSPREGMAATISYWQDRK  261 (366)
Q Consensus       209 ~~~~p~l~~~ev~~~~~~~~~d~~ka~~~LG~~p~~~~~e~l~~~v~~~~~~~  261 (366)
                        .+....+.++    .....|++|++++|||+|+++++++|++|++||.+..
T Consensus       282 --~~~~~r~~~~----~~~~~d~~Kak~~LGw~P~~~le~gi~~ti~~~~~~~  328 (339)
T d1n7ha_         282 --DQRYFRPAEV----DNLQGDASKAKEVLGWKPQVGFEKLVKMMVDEDLELA  328 (339)
T ss_dssp             --CGGGSCSSCC----CBCCBCCHHHHHHHCCCCCSCHHHHHHHHHHHHHHHH
T ss_pred             --ccCCCCCCCC----CeeeECHHHHHHHHCCCcCCCHHHHHHHHHHHHHHHH
Confidence              1111122221    1124599999999999999999999999999997753

>d1ek6a_ c.2.1.2 (A:) Uridine diphosphogalactose-4-epimerase (UDP-galactose 4-epimerase) {Human (Homo sapiens) [TaxId: 9606]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Tyrosine-dependent oxidoreductases
domain: Uridine diphosphogalactose-4-epimerase (UDP-galactose 4-epimerase)
species: Human (Homo sapiens) [TaxId: 9606]

Probab=99.94  E-value=3.5e-26  Score=215.41  Aligned_cols=207  Identities=19%  Similarity=0.194  Sum_probs=154.7

Q ss_pred             CeEEEEcCCChhHHHHHHHHHHcCCceEEEEecCCCCccc-----------ccccCCCeEEEEcc---------------
Q 017760           12 KTFLVTGGLGHVGSALCLELVRRGAYQVRAFDLRTNSPWS-----------HLLINHGVHCIQGL---------------   65 (366)
Q Consensus        12 ~~VlITGgtGfiG~~L~~~L~~~g~~~V~~~dr~~~~~~~-----------~~~~~~~v~~i~gD---------------   65 (366)
                      +||||||||||+|++|+++|+++| ++|+++|+.......           .....+.++++++|               
T Consensus         3 kKILITG~tGfIGs~lv~~Ll~~g-~~V~~ld~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~Dl~d~~~l~~~~~~~~   81 (346)
T d1ek6a_           3 EKVLVTGGAGYIGSHTVLELLEAG-YLPVVIDNFHNAFRGGGSLPESLRRVQELTGRSVEFEEMDILDQGALQRLFKKYS   81 (346)
T ss_dssp             SEEEEETTTSHHHHHHHHHHHHTT-CCEEEEECSSSSCBCSSSSBHHHHHHHHHHTCCCEEEECCTTCHHHHHHHHHHCC
T ss_pred             CeEEEECCCcHHHHHHHHHHHHCc-CEEEEEECCCccccccccchHHHHHHHHhcCCCcEEEEeeccccccccccccccc
Confidence            689999999999999999999999 599999864322111           11234678888888               


Q ss_pred             --------------------------------------------------------------------------------
Q 017760           66 --------------------------------------------------------------------------------   65 (366)
Q Consensus        66 --------------------------------------------------------------------------------   65 (366)
                                                                                                      
T Consensus        82 ~~~i~h~Aa~~~~~~~~~~p~~~~~~Nv~gt~~l~~~~~~~~v~~~i~~ss~~~~~~~~~~~~~~~~~~~~~~~~Y~~~k  161 (346)
T d1ek6a_          82 FMAVIHFAGLKAVGESVQKPLDYYRVNLTGTIQLLEIMKAHGVKNLVFSSSATVYGNPQYLPLDEAHPTGGCTNPYGKSK  161 (346)
T ss_dssp             EEEEEECCSCCCHHHHHHCHHHHHHHHHHHHHHHHHHHHHTTCCEEEEEEEGGGGCSCSSSSBCTTSCCCCCSSHHHHHH
T ss_pred             cccccccccccCcHhhHhCHHHHHHhhhcccccccchhhhcCcccccccccceeeeccccccccccccccccCChHHHHH
Confidence                                                                                            


Q ss_pred             --------c-cCCCCCceEEEEeCCccccCCCC------------CCHHHHHHHHH-cCCCCeeec------CCCcceec
Q 017760           66 --------R-KNNRKCLYTCAVRPAAIYGPGEE------------RHLPRIVSLAK-LGLVPFKIG------EPSVKTDW  117 (366)
Q Consensus        66 --------k-s~~~~~l~~~ilRp~~iyGp~~~------------~~l~~~i~~~~-~g~~~~~~g------~~~~~~~~  117 (366)
                              + .....+++.+++||+.+|||+..            ..++.+...+. ++..+.++|      ++.+.+||
T Consensus       162 ~~~e~~~~~~~~~~~~~~~~~lR~~~v~G~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~i~g~~~~~~~g~~~Rdf  241 (346)
T d1ek6a_         162 FFIEEMIRDLCQADKTWNAVLLRYFNPTGAHASGCIGEDPQGIPNNLMPYVSQVAIGRREALNVFGNDYDTEDGTGVRDY  241 (346)
T ss_dssp             HHHHHHHHHHHHHCTTCEEEEEEECEEECCCTTSSCCCCCSSSCCSHHHHHHHHHHTSSSCEEEECSCSSSSSSSCEECE
T ss_pred             HHHHHHHHHHHHhccCCceEEEeecceeccCCCCCcCccccccHHHHHHHHHHHHHcCCCcEEEcCCcccCCCCCeeEeE
Confidence                    0 02346899999999999998642            23454554443 344444443      56778999


Q ss_pred             eeHHHHHHHHHHHHhccccCCCCCCCCCCCCCccEEecCCCCCCHHHHHHHHHHhcCCCCCccccCHHHHHHHHHHHHHH
Q 017760          118 IYVDNLVLALILASMGLLDDIPGQKGRPIASGQPYFVSDGFPINTFEFIGPLLKTLDYDLPKSWLAVPHALFLGKVFSFF  197 (366)
Q Consensus       118 v~vdDla~a~~~a~~~l~~~~~~~~~~~~~~g~~y~I~~~~~vs~~e~~~~l~~~lg~~~~~~~lp~~~~~~~a~~~e~~  197 (366)
                      +|++|+|.++..+++..         .....+++|||++++++|+.|+++.+.+.+|.+.+....|              
T Consensus       242 i~v~D~a~~~~~~~~~~---------~~~~~~~i~Ni~~~~~~s~~dl~~~i~~~~~~~~~~~~~~--------------  298 (346)
T d1ek6a_         242 IHVVDLAKGHIAALRKL---------KEQCGCRIYNLGTGTGYSVLQMVQAMEKASGKKIPYKVVA--------------  298 (346)
T ss_dssp             EEHHHHHHHHHHHHHHH---------TTTCCEEEEEECCSCCEEHHHHHHHHHHHHCSCCCEEEEC--------------
T ss_pred             EEEEeccchhhhhcccc---------ccccCceEEEeCCCCcccHHHHHHHHHHHhCCCCCeEECC--------------
Confidence            99999999998887532         2345678999999999999999999999999876644322              


Q ss_pred             HHhhhhccccccCCCCCCcHHhhhhhcccceecHHHHHHhcCCCCCCChHHHHHHHHHHHHhcccc
Q 017760          198 YSVLYPWLNRWWLPQPLILPAEVYKVGVTHYFSLLKAKDELCYVPIVSPREGMAATISYWQDRKRK  263 (366)
Q Consensus       198 ~~~~~~~~~~~~~~~p~l~~~ev~~~~~~~~~d~~ka~~~LG~~p~~~~~e~l~~~v~~~~~~~~~  263 (366)
                                    .+   +.+.    .....|++|++++|||+|+++++|+|+++++||+++...
T Consensus       299 --------------~~---~~e~----~~~~~d~~k~~~~lgw~p~~slee~I~~~i~w~~~n~~~  343 (346)
T d1ek6a_         299 --------------RR---EGDV----AACYANPSLAQEELGWTAALGLDRMCEDLWRWQKQNPSG  343 (346)
T ss_dssp             --------------CC---TTCC----SEECBCCHHHHHTTCCCCCCCHHHHHHHHHHHHHHCTTC
T ss_pred             --------------CC---CCCC----CEeeECHHHHHHHHCCCcCCCHHHHHHHHHHHHHhCHhh
Confidence                          11   1121    122569999999999999999999999999999988754

>d1gy8a_ c.2.1.2 (A:) Uridine diphosphogalactose-4-epimerase (UDP-galactose 4-epimerase) {Trypanosoma brucei [TaxId: 5691]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Tyrosine-dependent oxidoreductases
domain: Uridine diphosphogalactose-4-epimerase (UDP-galactose 4-epimerase)
species: Trypanosoma brucei [TaxId: 5691]

Probab=99.93  E-value=5e-26  Score=217.48  Aligned_cols=155  Identities=15%  Similarity=0.034  Sum_probs=111.4

Q ss_pred             CCCceEEEEeCCccccCCCCC-----------CHHHHHHHHH----------------cCCCCeee------cCCCccee
Q 017760           70 RKCLYTCAVRPAAIYGPGEER-----------HLPRIVSLAK----------------LGLVPFKI------GEPSVKTD  116 (366)
Q Consensus        70 ~~~l~~~ilRp~~iyGp~~~~-----------~l~~~i~~~~----------------~g~~~~~~------g~~~~~~~  116 (366)
                      ..+++++++||+++|||++..           .++.++..+.                .+..+.+.      +||.+.+|
T Consensus       192 ~~gl~~~~lR~~~vyG~~~~~~~~~~~~~~~~~ip~ii~~~~~~~~~~~~~~~~~~~~~~~~~~i~g~~~~~~dg~~~Rd  271 (383)
T d1gy8a_         192 AYGIKGICLRYFNACGAHEDGDIGEHYQGSTHLIPIILGRVMSDIAPDQRLTIHEDASTDKRMPIFGTDYPTPDGTCVRD  271 (383)
T ss_dssp             HHCCEEEEEEECEEECCCTTSSCSCCSTTCCSHHHHHHHHHHHHHSCC-----------CCCEEEECSCSSSTTSSCEEC
T ss_pred             HhCCCEEEEecceeeccCccccccccccccchhHHHHHHHHHhhccccccchhhhhhhcCCceEEeCCccccCCCCeEEe
Confidence            358999999999999998742           2444444332                22333333      35788899


Q ss_pred             ceeHHHHHHHHHHHHhccccCCCCCCCCCCCCCccEEecCCCCCCHHHHHHHHHHhcCCCCCccccCHHHHHHHHHHHHH
Q 017760          117 WIYVDNLVLALILASMGLLDDIPGQKGRPIASGQPYFVSDGFPINTFEFIGPLLKTLDYDLPKSWLAVPHALFLGKVFSF  196 (366)
Q Consensus       117 ~v~vdDla~a~~~a~~~l~~~~~~~~~~~~~~g~~y~I~~~~~vs~~e~~~~l~~~lg~~~~~~~lp~~~~~~~a~~~e~  196 (366)
                      |+||+|+|+|+..+++.....+   .......+++||++.++++|+.|+++.+.+.+|.+.+....+             
T Consensus       272 fi~v~D~~~a~~~~~~~~~~~~---~~~~~~~~~i~Ni~s~~~~s~~el~~~i~~~~~~~~~~~~~~-------------  335 (383)
T d1gy8a_         272 YVHVCDLASAHILALDYVEKLG---PNDKSKYFSVFNLGTSRGYSVREVIEVARKTTGHPIPVRECG-------------  335 (383)
T ss_dssp             EEEHHHHHHHHHHHHHHHHTCC---TTTGGGSEEEEEESCSCCEEHHHHHHHHHHHHCCCCCEEEEC-------------
T ss_pred             eEEHHHHHHHHHHHHhhhcccc---ccccccCccEEEeCCCCceeHHHHHHHHHHHhCCCCceEECC-------------
Confidence            9999999999999997543321   012344568999999999999999999999999886654321             


Q ss_pred             HHHhhhhccccccCCCCCCcHHhhhhhcccceecHHHHHHhcCCCCCCChHHHHHHH-HHHHHhccc
Q 017760          197 FYSVLYPWLNRWWLPQPLILPAEVYKVGVTHYFSLLKAKDELCYVPIVSPREGMAAT-ISYWQDRKR  262 (366)
Q Consensus       197 ~~~~~~~~~~~~~~~~p~l~~~ev~~~~~~~~~d~~ka~~~LG~~p~~~~~e~l~~~-v~~~~~~~~  262 (366)
                                     .+   +.++    .....|++|++++|||+|+++++|+|.++ +.|++.+..
T Consensus       336 ---------------~~---~~d~----~~~~~d~~k~~k~LGw~P~~~l~e~i~~t~~~w~~~~~~  380 (383)
T d1gy8a_         336 ---------------RR---EGDP----AYLVAASDKAREVLGWKPKYDTLEAIMETSWKFQRTHPN  380 (383)
T ss_dssp             ---------------CC---TTCC----SEECBCCHHHHHHTCCCCSCCSHHHHHHHHHHHHHTCTT
T ss_pred             ---------------CC---CCCc----CEeeeCHHHHHHHHCCccCCCHHHHHHHHHHHHHHhCcc
Confidence                           11   1111    11246999999999999999999999997 478887653

>d1rkxa_ c.2.1.2 (A:) CDP-glucose-4,6-dehydratase {Yersinia pseudotuberculosis [TaxId: 633]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Tyrosine-dependent oxidoreductases
domain: CDP-glucose-4,6-dehydratase
species: Yersinia pseudotuberculosis [TaxId: 633]

Probab=99.93  E-value=1.1e-25  Score=212.22  Aligned_cols=213  Identities=20%  Similarity=0.203  Sum_probs=153.8

Q ss_pred             ccCCeEEEEcCCChhHHHHHHHHHHcCCceEEEEecCCCCcccc---cccCCCeEEEEcc--------------------
Q 017760            9 IEGKTFLVTGGLGHVGSALCLELVRRGAYQVRAFDLRTNSPWSH---LLINHGVHCIQGL--------------------   65 (366)
Q Consensus         9 ~~~~~VlITGgtGfiG~~L~~~L~~~g~~~V~~~dr~~~~~~~~---~~~~~~v~~i~gD--------------------   65 (366)
                      .+++||||||||||||++|++.|+++| ++|++++|+.+.....   ....++++++++|                    
T Consensus         6 ~~~KkILVTG~tGfIGs~lv~~Ll~~g-~~V~~~~r~~~~~~~~~~~~~~~~~i~~~~~Dl~d~~~l~~~~~~~~~~~v~   84 (356)
T d1rkxa_           6 WQGKRVFVTGHTGFKGGWLSLWLQTMG-ATVKGYSLTAPTVPSLFETARVADGMQSEIGDIRDQNKLLESIREFQPEIVF   84 (356)
T ss_dssp             HTTCEEEEETTTSHHHHHHHHHHHHTT-CEEEEEESSCSSSSCHHHHTTTTTTSEEEECCTTCHHHHHHHHHHHCCSEEE
T ss_pred             hCCCEEEEECCCCHHHHHHHHHHHHCC-CEEEEEECCCCccHHHHhhhhcccCCeEEEeeccChHhhhhhhhhchhhhhh
Confidence            457999999999999999999999999 5999999987654321   1123578999998                    


Q ss_pred             --------------------------------------------------------------------------------
Q 017760           66 --------------------------------------------------------------------------------   65 (366)
Q Consensus        66 --------------------------------------------------------------------------------   65 (366)
                                                                                                      
T Consensus        85 ~~aa~~~~~~~~~~~~~~~~~Nv~g~~n~l~~~~~~~~~~~~~~~s~~~~~~~~~~~~~~~~~~~~~p~~~y~~~k~~~e  164 (356)
T d1rkxa_          85 HMAAQPLVRLSYSEPVETYSTNVMGTVYLLEAIRHVGGVKAVVNITSDKCYDNKEWIWGYRENEAMGGYDPYSNSKGCAE  164 (356)
T ss_dssp             ECCSCCCHHHHHHCHHHHHHHHTHHHHHHHHHHHHHCCCCEEEEECCGGGBCCCCSSSCBCTTSCBCCSSHHHHHHHHHH
T ss_pred             hhhccccccccccCCccccccccccchhhhhhhhccccccccccccccccccccccccccccccccCCCCccccccccch
Confidence                                                                                            


Q ss_pred             -------------ccCCCCCceEEEEeCCccccCCCC---CCHHHHHHHHHcCCCCeeecCCCcceeceeHHHHHHHHHH
Q 017760           66 -------------RKNNRKCLYTCAVRPAAIYGPGEE---RHLPRIVSLAKLGLVPFKIGEPSVKTDWIYVDNLVLALIL  129 (366)
Q Consensus        66 -------------ks~~~~~l~~~ilRp~~iyGp~~~---~~l~~~i~~~~~g~~~~~~g~~~~~~~~v~vdDla~a~~~  129 (366)
                                   ......++.++++||+++|||++.   ++++.++..+..+.. ...+++.+.++++|++|+++|+..
T Consensus       165 ~~~~~~~~~~~~~~~~~~~~~~~~~~r~~~vyGp~~~~~~~~i~~~~~~~~~~~~-~~~~~~~~~~~~~~v~D~~~a~~~  243 (356)
T d1rkxa_         165 LVTSSYRNSFFNPANYGQHGTAVATVRAGNVIGGGDWALDRIVPDILRAFEQSQP-VIIRNPHAIRPWQHVLEPLSGYLL  243 (356)
T ss_dssp             HHHHHHHHHHSCGGGHHHHCCEEEEEECCCEECTTCCCSSCHHHHHHHHHHTTCC-EECSCTTCEECCEETHHHHHHHHH
T ss_pred             hhhhHHhhhcccchhccccCceEEeccCCCeeCCCcchhhHHHHHHHHHHhCCCc-eEEeeccccccccccccccchhhh
Confidence                         001134578999999999999863   455667777665554 678899999999999999999999


Q ss_pred             HHhccccCCCCCCCCCCCCCccEEecCCCCCCHHHHHHHHHHhcCCCCCccccCHHHHHHHHHHHHHHHHhhhhcccccc
Q 017760          130 ASMGLLDDIPGQKGRPIASGQPYFVSDGFPINTFEFIGPLLKTLDYDLPKSWLAVPHALFLGKVFSFFYSVLYPWLNRWW  209 (366)
Q Consensus       130 a~~~l~~~~~~~~~~~~~~g~~y~I~~~~~vs~~e~~~~l~~~lg~~~~~~~lp~~~~~~~a~~~e~~~~~~~~~~~~~~  209 (366)
                      +++.....     ......+..++...+..++..++++.+.+.++...+....                           
T Consensus       244 ~~~~~~~~-----~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~~~~~~~~~~~---------------------------  291 (356)
T d1rkxa_         244 LAQKLYTD-----GAEYAEGWNFGPNDADATPVKNIVEQMVKYWGEGASWQLD---------------------------  291 (356)
T ss_dssp             HHHHHHHT-----CGGGCSEEECCCCGGGCEEHHHHHHHHHHHHCTTCCEEC----------------------------
T ss_pred             hhhhhccc-----ccccccccccccccccccccchhhhhhHHHhCCCccEEEc---------------------------
Confidence            98742221     0011112233334456789999999999999976543211                           


Q ss_pred             CCCCCCcHHhhhhhcccceecHHHHHHhcCCCCCCChHHHHHHHHHHHHhccc
Q 017760          210 LPQPLILPAEVYKVGVTHYFSLLKAKDELCYVPIVSPREGMAATISYWQDRKR  262 (366)
Q Consensus       210 ~~~p~l~~~ev~~~~~~~~~d~~ka~~~LG~~p~~~~~e~l~~~v~~~~~~~~  262 (366)
                         +...+.+.    .....|++|++++|||+|+++++++|++|++||++...
T Consensus       292 ---~~~~~~~~----~~~~~d~skak~~LGw~P~~~l~egi~~ti~wyk~~~~  337 (356)
T d1rkxa_         292 ---GNAHPHEA----HYLKLDCSKAKMQLGWHPRWNLNTTLEYIVGWHKNWLS  337 (356)
T ss_dssp             ---------CC----CCCCBCCHHHHHHHCCCCCCCHHHHHHHHHHHHHHHHT
T ss_pred             ---CCCCCCCc----CeeeEcHHHHHHHHCCCcCCCHHHHHHHHHHHHHHHHc
Confidence               11112221    11246999999999999999999999999999987543

>d1t2aa_ c.2.1.2 (A:) GDP-mannose 4,6-dehydratase {Human (Homo sapiens) [TaxId: 9606]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Tyrosine-dependent oxidoreductases
domain: GDP-mannose 4,6-dehydratase
species: Human (Homo sapiens) [TaxId: 9606]

Probab=99.92  E-value=3.1e-25  Score=208.58  Aligned_cols=219  Identities=17%  Similarity=0.088  Sum_probs=149.5

Q ss_pred             CeE-EEEcCCChhHHHHHHHHHHcCCceEEEEecCCCCcccc----------cccCCCeEEEEcc---------------
Q 017760           12 KTF-LVTGGLGHVGSALCLELVRRGAYQVRAFDLRTNSPWSH----------LLINHGVHCIQGL---------------   65 (366)
Q Consensus        12 ~~V-lITGgtGfiG~~L~~~L~~~g~~~V~~~dr~~~~~~~~----------~~~~~~v~~i~gD---------------   65 (366)
                      +|| ||||||||||++|+++|+++| ++|+++||.++.....          .....+++++++|               
T Consensus         1 kKI~LVTG~tGfIG~~l~~~Ll~~g-~~V~~i~r~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~Dl~d~~~~~~~~~~~~   79 (347)
T d1t2aa_           1 RNVALITGITGQDGSYLAEFLLEKG-YEVHGIVRRSSSFNTGRIEHLYKNPQAHIEGNMKLHYGDLTDSTCLVKIINEVK   79 (347)
T ss_dssp             CCEEEEETTTSHHHHHHHHHHHHTT-CEEEEEECCCSSCCCTTTGGGC---------CEEEEECCTTCHHHHHHHHHHHC
T ss_pred             CCEEEEecCCcHHHHHHHHHHHHCc-CEEEEEECCCcccchhhHHHHhhchhhhccCCcEEEEeecCCchhhHHHHhhcc
Confidence            578 999999999999999999999 5999999976432111          1112467899988               


Q ss_pred             --------------------------------------------------------------------------------
Q 017760           66 --------------------------------------------------------------------------------   65 (366)
Q Consensus        66 --------------------------------------------------------------------------------   65 (366)
                                                                                                      
T Consensus        80 ~~~v~~~~a~~~~~~~~~~~~~~~~~Nv~gt~~ll~~~~~~~~~~~~~~i~~SS~~vyg~~~~~~~~E~~~~~P~~~Yg~  159 (347)
T d1t2aa_          80 PTEIYNLGAQSHVKISFDLAEYTADVDGVGTLRLLDAVKTCGLINSVKFYQASTSELYGKVQEIPQKETTPFYPRSPYGA  159 (347)
T ss_dssp             CSEEEECCSCCCHHHHHHSHHHHHHHHTHHHHHHHHHHHHTTCTTTCEEEEEEEGGGTCSCSSSSBCTTSCCCCCSHHHH
T ss_pred             cceeeeeeeccccchhhccchhhhhhHHHHHHHHHHHHHHcCCCCCcEEEEecchheecCCCCCCCCCCCCCCCCCHHHH
Confidence                                                                                            


Q ss_pred             ----------ccCCCCCceEEEEeCCccccCCCCC-C-----HHHHHHHHHcCCCCeeecCCCcceeceeHHHHHHHHHH
Q 017760           66 ----------RKNNRKCLYTCAVRPAAIYGPGEER-H-----LPRIVSLAKLGLVPFKIGEPSVKTDWIYVDNLVLALIL  129 (366)
Q Consensus        66 ----------ks~~~~~l~~~ilRp~~iyGp~~~~-~-----l~~~i~~~~~g~~~~~~g~~~~~~~~v~vdDla~a~~~  129 (366)
                                ...+..+++++++||+++|||+... .     ...+......+......|++++.++|+|++|+++|+..
T Consensus       160 sK~~aE~~~~~~~~~~~~~~~ilr~~~vyGp~~~~~~~~~~~~~~i~~~~~~~~~~~~~g~g~~~r~~i~v~D~~~a~~~  239 (347)
T d1t2aa_         160 AKLYAYWIVVNFREAYNLFAVNGILFNHESPRRGANFVTRKISRSVAKIYLGQLECFSLGNLDAKRDWGHAKDYVEAMWL  239 (347)
T ss_dssp             HHHHHHHHHHHHHHHHCCEEEEEEECCEECTTSCTTSHHHHHHHHHHHHHHTSCSCEEESCTTCEECCEEHHHHHHHHHH
T ss_pred             HHHHHHHHHHHHHHHhCCCEEEEEecceeCCCCCCCccccccceeeehhhcCCcceeecCCCcceeeeeEecHHHHHHHH
Confidence                      0023457899999999999997532 1     22344445556667888999999999999999999999


Q ss_pred             HHhccccCCCCCCCCCCCCCccEEecCCCCCCHHHHHHHHHHhcCCCCCccccCHHHHHHHHHHHHHHHHhhhhcccccc
Q 017760          130 ASMGLLDDIPGQKGRPIASGQPYFVSDGFPINTFEFIGPLLKTLDYDLPKSWLAVPHALFLGKVFSFFYSVLYPWLNRWW  209 (366)
Q Consensus       130 a~~~l~~~~~~~~~~~~~~g~~y~I~~~~~vs~~e~~~~l~~~lg~~~~~~~lp~~~~~~~a~~~e~~~~~~~~~~~~~~  209 (366)
                      ++++           .  ..+.|+++.+...+..+....+...++........+....              . ......
T Consensus       240 ~~~~-----------~--~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~--------------~-~~~~~~  291 (347)
T d1t2aa_         240 MLQN-----------D--EPEDFVIATGEVHSVREFVEKSFLHIGKTIVWEGKNENEV--------------G-RCKETG  291 (347)
T ss_dssp             HHHS-----------S--SCCCEEECCSCCEEHHHHHHHHHHHTTCCEEEESCGGGCE--------------E-EETTTC
T ss_pred             Hhhc-----------C--CCccceeccccccccchhhhhhhhhhcceeeecccchhhh--------------h-hhhhcC
Confidence            9973           2  2457999999999999999999999987643221110000              0 000000


Q ss_pred             CCCCCCcHHhhhhhcc-cceecHHHHHHhcCCCCCCChHHHHHHHHHHHHh
Q 017760          210 LPQPLILPAEVYKVGV-THYFSLLKAKDELCYVPIVSPREGMAATISYWQD  259 (366)
Q Consensus       210 ~~~p~l~~~ev~~~~~-~~~~d~~ka~~~LG~~p~~~~~e~l~~~v~~~~~  259 (366)
                      ...........+.... ....|++|++++|||+|+++++|+|++++++..+
T Consensus       292 ~~~~~~~~~~~rp~~~~~~~~d~skak~~Lgw~P~~sl~e~i~~~I~~~~~  342 (347)
T d1t2aa_         292 KVHVTVDLKYYRPTEVDFLQGDCTKAKQKLNWKPRVAFDELVREMVHADVE  342 (347)
T ss_dssp             CEEEEECGGGSCSSCCCBCCBCCHHHHHHHCCCCCSCHHHHHHHHHHHHHH
T ss_pred             CceeeecccCCCCCCcCEeeECHHHHHHHHCCCcCCCHHHHHHHHHHHHHH
Confidence            0000000000011111 2256999999999999999999999999976544

>d1orra_ c.2.1.2 (A:) CDP-tyvelose-2-epimerase {Salmonella typhi [TaxId: 90370]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Tyrosine-dependent oxidoreductases
domain: CDP-tyvelose-2-epimerase
species: Salmonella typhi [TaxId: 90370]

Probab=99.92  E-value=3.1e-25  Score=207.09  Aligned_cols=144  Identities=13%  Similarity=0.149  Sum_probs=110.3

Q ss_pred             CCceEEEEeCCccccCCCC-----CCHHHHHHHHH-----cCCCCeeecCCCcceeceeHHHHHHHHHHHHhccccCCCC
Q 017760           71 KCLYTCAVRPAAIYGPGEE-----RHLPRIVSLAK-----LGLVPFKIGEPSVKTDWIYVDNLVLALILASMGLLDDIPG  140 (366)
Q Consensus        71 ~~l~~~ilRp~~iyGp~~~-----~~l~~~i~~~~-----~g~~~~~~g~~~~~~~~v~vdDla~a~~~a~~~l~~~~~~  140 (366)
                      .+...+++|++.+||+...     ..++.++..+.     .++.+.+.|+|++.++|+|++|+|++++.+++.       
T Consensus       182 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~g~~~r~~~~v~D~~~~~~~~l~~-------  254 (338)
T d1orra_         182 FGLNTVVFRHSSMYGGRQFATYDQGWVGWFCQKAVEIKNGINKPFTISGNGKQVRDVLHAEDMISLYFTALAN-------  254 (338)
T ss_dssp             HCCEEEEEEECCEECTTCCCBTTBCHHHHHHHHHHHHHTTCCCCEEEESSSCCEEECEEHHHHHHHHHHHHHT-------
T ss_pred             cCcccccccccceeeccccccccccccchhhHHHHHHHhccCCceEEeCCCceeEeeecccchhhHHHHHHhc-------
Confidence            4667999999999987542     34556655543     366778889999999999999999999999973       


Q ss_pred             CCCCCCCCCccEEecCC--CCCCHHHHHHHHHHhcCCCCCccccCHHHHHHHHHHHHHHHHhhhhccccccCCCCCCcHH
Q 017760          141 QKGRPIASGQPYFVSDG--FPINTFEFIGPLLKTLDYDLPKSWLAVPHALFLGKVFSFFYSVLYPWLNRWWLPQPLILPA  218 (366)
Q Consensus       141 ~~~~~~~~g~~y~I~~~--~~vs~~e~~~~l~~~lg~~~~~~~lp~~~~~~~a~~~e~~~~~~~~~~~~~~~~~p~l~~~  218 (366)
                         .....|++|++..+  +++++.|+++.+.+..|.+.+....|                           ..+    .
T Consensus       255 ---~~~~~~~~~~i~~~~~~~~s~~e~~~~i~~~~~~~~~~~~~~---------------------------~~~----~  300 (338)
T d1orra_         255 ---VSKIRGNAFNIGGTIVNSLSLLELFKLLEDYCNIDMRFTNLP---------------------------VRE----S  300 (338)
T ss_dssp             ---HHHHTTCEEEESSCGGGEEEHHHHHHHHHHHHTCCCCEEEEC---------------------------CCS----S
T ss_pred             ---cccccCccccccccccccccHHHHHHHHHHHHCCCceeEeCC---------------------------CCC----C
Confidence               23456889999654  56899999999999999876644322                           111    1


Q ss_pred             hhhhhcccceecHHHHHHhcCCCCCCChHHHHHHHHHHHHh
Q 017760          219 EVYKVGVTHYFSLLKAKDELCYVPIVSPREGMAATISYWQD  259 (366)
Q Consensus       219 ev~~~~~~~~~d~~ka~~~LG~~p~~~~~e~l~~~v~~~~~  259 (366)
                      +.    .....|++|++++|||+|+++++|+|+++++|||.
T Consensus       301 ~~----~~~~~d~~k~~~~Lg~~p~~sl~e~i~~ti~W~k~  337 (338)
T d1orra_         301 DQ----RVFVADIKKITNAIDWSPKVSAKDGVQKMYDWTSS  337 (338)
T ss_dssp             CC----SEECBCCHHHHHHHCCCCCSCHHHHHHHHHHHHHH
T ss_pred             Cc----CeeeECHHHHHHHHCCCcCCCHHHHHHHHHHHHHc
Confidence            11    11235999999999999999999999999999985

>d1z45a2 c.2.1.2 (A:11-357) Uridine diphosphogalactose-4-epimerase (UDP-galactose 4-epimerase) {Baker's yeast (Saccharomyces cerevisiae) [TaxId: 4932]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Tyrosine-dependent oxidoreductases
domain: Uridine diphosphogalactose-4-epimerase (UDP-galactose 4-epimerase)
species: Baker's yeast (Saccharomyces cerevisiae) [TaxId: 4932]

Probab=99.92  E-value=1.1e-24  Score=205.32  Aligned_cols=209  Identities=21%  Similarity=0.234  Sum_probs=151.5

Q ss_pred             CeEEEEcCCChhHHHHHHHHHHcCCceEEEEecCCCCccc-----ccccCCCeEEEEcc---------------------
Q 017760           12 KTFLVTGGLGHVGSALCLELVRRGAYQVRAFDLRTNSPWS-----HLLINHGVHCIQGL---------------------   65 (366)
Q Consensus        12 ~~VlITGgtGfiG~~L~~~L~~~g~~~V~~~dr~~~~~~~-----~~~~~~~v~~i~gD---------------------   65 (366)
                      |.|||||||||||++|+++|+++| ++|+++|+.......     ......+++++++|                     
T Consensus         2 K~ILVTGatGfIG~~lv~~Ll~~g-~~V~~~d~~~~~~~~~~~~~~~~~~~~v~~~~~Dl~d~~~l~~~~~~~~~d~Vih   80 (347)
T d1z45a2           2 KIVLVTGGAGYIGSHTVVELIENG-YDCVVADNLSNSTYDSVARLEVLTKHHIPFYEVDLCDRKGLEKVFKEYKIDSVIH   80 (347)
T ss_dssp             CEEEEETTTSHHHHHHHHHHHHTT-CEEEEEECCSSCCTHHHHHHHHHHTSCCCEEECCTTCHHHHHHHHHHSCCCEEEE
T ss_pred             CEEEEeCCCcHHHHHHHHHHHHCc-CeEEEEECCCCcchhHHHhHHhhcccCCeEEEeecCCHHHHHHHHhccCCCEEEE
Confidence            469999999999999999999999 599999875433211     22234678888888                     


Q ss_pred             ----------------------------------------------------------------------------c---
Q 017760           66 ----------------------------------------------------------------------------R---   66 (366)
Q Consensus        66 ----------------------------------------------------------------------------k---   66 (366)
                                                                                                  |   
T Consensus        81 lAa~~~~~~~~~~~~~~~~~N~~~t~~ll~~~~~~~i~~~i~~SS~~vyg~~~~~~~~~~~~e~~~~~p~~~Y~~sK~~~  160 (347)
T d1z45a2          81 FAGLKAVGESTQIPLRYYHNNILGTVVLLELMQQYNVSKFVFSSSATVYGDATRFPNMIPIPEECPLGPTNPYGHTKYAI  160 (347)
T ss_dssp             CCSCCCHHHHHHSHHHHHHHHHHHHHHHHHHHHHHTCCEEEEEEEGGGGCCGGGSTTCCSBCTTSCCCCCSHHHHHHHHH
T ss_pred             ccccccccccccCcccccccchhhhHHHHHHHHhcccceEEeecceeeecCcccCCCCCccccccCCCCCChhHhHHHHH
Confidence                                                                                        0   


Q ss_pred             --------cCCCCCceEEEEeCCccccCCCC------------CCHHHHHHHHH-cCCCCeeecCC------Ccceecee
Q 017760           67 --------KNNRKCLYTCAVRPAAIYGPGEE------------RHLPRIVSLAK-LGLVPFKIGEP------SVKTDWIY  119 (366)
Q Consensus        67 --------s~~~~~l~~~ilRp~~iyGp~~~------------~~l~~~i~~~~-~g~~~~~~g~~------~~~~~~v~  119 (366)
                              .....+++++++||+++||+...            ..++.++..+. ++..+.++|++      ...+|+++
T Consensus       161 E~~~~~~~~~~~~~~~~~~lR~~~v~g~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~i~i~g~~~~~~~~~~~~d~~~  240 (347)
T d1z45a2         161 ENILNDLYNSDKKSWKFAILRYFNPIGAHPSGLIGEDPLGIPNNLLPYMAQVAVGRREKLYIFGDDYDSRDGTPIRDYIH  240 (347)
T ss_dssp             HHHHHHHHHHSTTSCEEEEEEECEEECCCTTSSCCCCCSSSCCSHHHHHHHHHTTSSSCCCCC------CCSSCEECEEE
T ss_pred             HHHHHHHHHhhccCCcEEEEeecceEeecCCCccCCCccccHHHHHHHHHHHHhcCCCCeEEeCCCccccCCceeeeeee
Confidence                    02456889999999999998542            23445555443 34455566654      45677888


Q ss_pred             HHHHHHHHHHHHhccccCCCCCCCCCCCCCccEEecCCCCCCHHHHHHHHHHhcCCCCCccccCHHHHHHHHHHHHHHHH
Q 017760          120 VDNLVLALILASMGLLDDIPGQKGRPIASGQPYFVSDGFPINTFEFIGPLLKTLDYDLPKSWLAVPHALFLGKVFSFFYS  199 (366)
Q Consensus       120 vdDla~a~~~a~~~l~~~~~~~~~~~~~~g~~y~I~~~~~vs~~e~~~~l~~~lg~~~~~~~lp~~~~~~~a~~~e~~~~  199 (366)
                      +.|++.+++.+++.+...     ......+++||+++++++|+.|+++.+.+.+|.+.+....+                
T Consensus       241 ~~~~~~~~~~~~~~~~~~-----~~~~~~~~~~Ni~~~~~~s~~e~~~~i~~~~~~~~~~~~~~----------------  299 (347)
T d1z45a2         241 VVDLAKGHIAALQYLEAY-----NENEGLCREWNLGSGKGSTVFEVYHAFCKASGIDLPYKVTG----------------  299 (347)
T ss_dssp             HHHHHHHHHHHHHHHHHS-----CTTCCEEEEEEESCSCCEEHHHHHHHHHHHHTCCCCC--------------------
T ss_pred             eecccccccccccccccc-----cccccccccceecCCCcccHHHHHHHHHHHHCCCCceEeCC----------------
Confidence            999999999988765443     13345578999999999999999999999999876643211                


Q ss_pred             hhhhccccccCCCCCCcHHhhhhhcccceecHHHHHHhcCCCCCCChHHHHHHHHHHHHhcc
Q 017760          200 VLYPWLNRWWLPQPLILPAEVYKVGVTHYFSLLKAKDELCYVPIVSPREGMAATISYWQDRK  261 (366)
Q Consensus       200 ~~~~~~~~~~~~~p~l~~~ev~~~~~~~~~d~~ka~~~LG~~p~~~~~e~l~~~v~~~~~~~  261 (366)
                                  .   .+.+.    .....|++|++++|||+|.++++|+|+++++||+++.
T Consensus       300 ------------~---~~~~~----~~~~~d~sk~~~~lGw~p~~~lee~i~~ti~w~~~np  342 (347)
T d1z45a2         300 ------------R---RAGDV----LNLTAKPDRAKRELKWQTELQVEDSCKDLWKWTTENP  342 (347)
T ss_dssp             --------------------C----CCCCBCCHHHHHHTCCCCCCCHHHHHHHHHHHHHHCT
T ss_pred             ------------C---CCCCC----CEeeECHHHHHHHHCCCCCCCHHHHHHHHHHHHHhCh
Confidence                        1   01111    1225799999999999999999999999999999984

>d1i24a_ c.2.1.2 (A:) Sulfolipid biosynthesis protein SQD1 {Thale cress (Arabidopsis thaliana) [TaxId: 3702]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Tyrosine-dependent oxidoreductases
domain: Sulfolipid biosynthesis protein SQD1
species: Thale cress (Arabidopsis thaliana) [TaxId: 3702]

Probab=99.92  E-value=7e-25  Score=210.05  Aligned_cols=148  Identities=16%  Similarity=0.140  Sum_probs=108.8

Q ss_pred             CCCceEEEEeCCccccCCCC-------------------CCHHHHHHHHHcCCCCeeecCCCcceeceeHHHHHHHHHHH
Q 017760           70 RKCLYTCAVRPAAIYGPGEE-------------------RHLPRIVSLAKLGLVPFKIGEPSVKTDWIYVDNLVLALILA  130 (366)
Q Consensus        70 ~~~l~~~ilRp~~iyGp~~~-------------------~~l~~~i~~~~~g~~~~~~g~~~~~~~~v~vdDla~a~~~a  130 (366)
                      ..+++++++||+++|||++.                   .++..++..+..|+.+.+.|++.+.+||+||+|+|+|+..+
T Consensus       199 ~~~l~~~~lR~~~v~G~~~~~~~~~~~~~~~~~~~~~~~~~i~~~~~~~~~~~~~~i~g~~~~~rd~v~v~D~~~a~~~~  278 (393)
T d1i24a_         199 AWGIRATDLNQGVVYGVKTDETEMHEELRNRLDYDAVFGTALNRFCVQAAVGHPLTVYGKGGQTRGYLDIRDTVQCVEIA  278 (393)
T ss_dssp             HHCCEEEEEEECEEECSCCTTGGGSGGGCCCCCCSTTTCCHHHHHHHHHHHTCCEEEETTSCCEEEEEEHHHHHHHHHHH
T ss_pred             ccceeeeecccccccCCCccccccccccccccccccccccchhhhhHHhhcCCeeEEeeecccccccccccchHHHHHHH
Confidence            34789999999999999753                   23678888888999989899999999999999999999999


Q ss_pred             HhccccCCCCCCCCCCCCCccEEe-cCCCCCCHHHHHHHHHHhcC---CCCCccccCHHHHHHHHHHHHHHHHhhhhccc
Q 017760          131 SMGLLDDIPGQKGRPIASGQPYFV-SDGFPINTFEFIGPLLKTLD---YDLPKSWLAVPHALFLGKVFSFFYSVLYPWLN  206 (366)
Q Consensus       131 ~~~l~~~~~~~~~~~~~~g~~y~I-~~~~~vs~~e~~~~l~~~lg---~~~~~~~lp~~~~~~~a~~~e~~~~~~~~~~~  206 (366)
                      ++           .....|+.+.+ .+++.+|+.|+++.+.+..+   .+.+....                        
T Consensus       279 ~~-----------~~~~~g~~~~~~~~~~~~si~el~~~i~~~~~~~~~~~~~~~~------------------------  323 (393)
T d1i24a_         279 IA-----------NPAKAGEFRVFNQFTEQFSVNELASLVTKAGSKLGLDVKKMTV------------------------  323 (393)
T ss_dssp             HH-----------SCCCTTCEEEEEECSEEEEHHHHHHHHHHHHHTTTCCCCEEEE------------------------
T ss_pred             HH-----------hhcccceeeeecCCCCeeEHHHHHHHHHHHHHhhCCCcceeec------------------------
Confidence            97           44445544333 34567899999888877653   33332211                        


Q ss_pred             cccCCCCCCcHHhhhhhcccceecHHHHHHhcCCCCCCChHHHHHHHHHHHHhccc
Q 017760          207 RWWLPQPLILPAEVYKVGVTHYFSLLKAKDELCYVPIVSPREGMAATISYWQDRKR  262 (366)
Q Consensus       207 ~~~~~~p~l~~~ev~~~~~~~~~d~~ka~~~LG~~p~~~~~e~l~~~v~~~~~~~~  262 (366)
                          +.|.. +.+.    .....|++|+++ |||+|+++++++++++++|+++.+.
T Consensus       324 ----~~~~~-~~~~----~~~~~d~~k~~~-LGw~P~~~~~~~i~~~~~~~~~~k~  369 (393)
T d1i24a_         324 ----PNPRV-EAEE----HYYNAKHTKLME-LGLEPHYLSDSLLDSLLNFAVQFKD  369 (393)
T ss_dssp             ----CCSSC-SCSS----CCCCBCCCHHHH-TTCCCCCCCHHHHHHHHHHHHHTGG
T ss_pred             ----cCCCC-CCCc----cEecCCHHHHHH-cCCccccCHHHHHHHHHHHHHHHHH
Confidence                12211 1111    111457899975 9999999999999999999877654

>d1vl0a_ c.2.1.2 (A:) DTDP-4-dehydrorhamnose reductase RfbD {Clostridium acetobutylicum [TaxId: 1488]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Tyrosine-dependent oxidoreductases
domain: DTDP-4-dehydrorhamnose reductase RfbD
species: Clostridium acetobutylicum [TaxId: 1488]

Probab=99.91  E-value=2.2e-25  Score=203.10  Aligned_cols=199  Identities=13%  Similarity=0.073  Sum_probs=147.6

Q ss_pred             CeEEEEcCCChhHHHHHHHHHHcCCceEEEEecCCCCcc-c----cccc--CCCeEEEEcc-------------------
Q 017760           12 KTFLVTGGLGHVGSALCLELVRRGAYQVRAFDLRTNSPW-S----HLLI--NHGVHCIQGL-------------------   65 (366)
Q Consensus        12 ~~VlITGgtGfiG~~L~~~L~~~g~~~V~~~dr~~~~~~-~----~~~~--~~~v~~i~gD-------------------   65 (366)
                      |||||||||||+|++|+++|.++| ++|+++||++..-. .    ..+.  .+++-+..+-                   
T Consensus         2 MKIlItGasGfiG~~l~~~L~~~g-~~Vi~~~r~~~D~~d~~~~~~~l~~~~~d~vih~a~~~~~~~~~~~~~~~~~~n~   80 (281)
T d1vl0a_           2 MKILITGANGQLGREIQKQLKGKN-VEVIPTDVQDLDITNVLAVNKFFNEKKPNVVINCAAHTAVDKCEEQYDLAYKINA   80 (281)
T ss_dssp             EEEEEESTTSHHHHHHHHHHTTSS-EEEEEECTTTCCTTCHHHHHHHHHHHCCSEEEECCCCCCHHHHHHCHHHHHHHHT
T ss_pred             CEEEEECCCCHHHHHHHHHHHhCC-CEEEEeechhccCCCHHHHHHHHHHcCCCEEEeeccccccccccccchhhccccc
Confidence            579999999999999999999999 69999998753211 0    1111  1233222221                   


Q ss_pred             ------------------------------------------------------ccCCCCCceEEEEeCCccccCCCCCC
Q 017760           66 ------------------------------------------------------RKNNRKCLYTCAVRPAAIYGPGEERH   91 (366)
Q Consensus        66 ------------------------------------------------------ks~~~~~l~~~ilRp~~iyGp~~~~~   91 (366)
                                                                            +..+..+.+.+++||+++|||+.+ +
T Consensus        81 ~~~~~~~~~~~~~~~~~~~~ss~~v~~~~~~~~~~e~~~~~~~~~~~~~k~~~e~~~~~~~~~~~i~R~~~vyG~~~~-~  159 (281)
T d1vl0a_          81 IGPKNLAAAAYSVGAEIVQISTDYVFDGEAKEPITEFDEVNPQSAYGKTKLEGENFVKALNPKYYIVRTAWLYGDGNN-F  159 (281)
T ss_dssp             HHHHHHHHHHHHHTCEEEEEEEGGGSCSCCSSCBCTTSCCCCCSHHHHHHHHHHHHHHHHCSSEEEEEECSEESSSSC-H
T ss_pred             ccccccccccccccccccccccceeeeccccccccccccccchhhhhhhhhHHHHHHHHhCCCccccceeEEeCCCcc-c
Confidence                                                                  012334678999999999999865 6


Q ss_pred             HHHHHHHHHcCCCCeeecCCCcceeceeHHHHHHHHHHHHhccccCCCCCCCCCCCCCccEEecCCCCCCHHHHHHHHHH
Q 017760           92 LPRIVSLAKLGLVPFKIGEPSVKTDWIYVDNLVLALILASMGLLDDIPGQKGRPIASGQPYFVSDGFPINTFEFIGPLLK  171 (366)
Q Consensus        92 l~~~i~~~~~g~~~~~~g~~~~~~~~v~vdDla~a~~~a~~~l~~~~~~~~~~~~~~g~~y~I~~~~~vs~~e~~~~l~~  171 (366)
                      ...++..+.++....+.++  +.++++|++|+++++..+++.             ...++||+++++++|..|+++.+++
T Consensus       160 ~~~~~~~~~~~~~~~~~~~--~~~~~i~v~D~~~~~~~~~~~-------------~~~g~~~~~~~~~~s~~e~~~~i~~  224 (281)
T d1vl0a_         160 VKTMINLGKTHDELKVVHD--QVGTPTSTVDLARVVLKVIDE-------------KNYGTFHCTCKGICSWYDFAVEIFR  224 (281)
T ss_dssp             HHHHHHHHHHCSEEEEESS--CEECCEEHHHHHHHHHHHHHH-------------TCCEEEECCCBSCEEHHHHHHHHHH
T ss_pred             ccchhhhhccCCceeecCC--ceeccchhhhhhhhhhhhhhh-------------cccCceeEeCCCccchHHHHHHHHH
Confidence            7778888888877666654  789999999999999999973             1235899999999999999999999


Q ss_pred             hcCCCCCccccCHHHHHHHHHHHHHHHHhhhhccccccCCCCCCcHHhhhhhcccceecHHHHHHhcCCCCCCChHHHHH
Q 017760          172 TLDYDLPKSWLAVPHALFLGKVFSFFYSVLYPWLNRWWLPQPLILPAEVYKVGVTHYFSLLKAKDELCYVPIVSPREGMA  251 (366)
Q Consensus       172 ~lg~~~~~~~lp~~~~~~~a~~~e~~~~~~~~~~~~~~~~~p~l~~~ev~~~~~~~~~d~~ka~~~LG~~p~~~~~e~l~  251 (366)
                      .+|.+.+...+|..                       ..+.+..+|       .....|++|+++++||+|+ +++++|+
T Consensus       225 ~~g~~~~i~~i~~~-----------------------~~~~~a~rp-------~~~~ld~~k~~~~~g~~~~-~~~~~l~  273 (281)
T d1vl0a_         225 LTGIDVKVTPCTTE-----------------------EFPRPAKRP-------KYSVLRNYMLELTTGDITR-EWKESLK  273 (281)
T ss_dssp             HHCCCCEEEEECST-----------------------TSCCSSCCC-------SBCCBCCHHHHHTTCCCCC-BHHHHHH
T ss_pred             HhCCCceEEeccHH-----------------------HcCCcCCCc-------cccccCHHHHHHHhCCCCC-CHHHHHH
Confidence            99988665444311                       001111111       1123699999999999998 9999999


Q ss_pred             HHHHHHH
Q 017760          252 ATISYWQ  258 (366)
Q Consensus       252 ~~v~~~~  258 (366)
                      ++++++|
T Consensus       274 ~~l~~l~  280 (281)
T d1vl0a_         274 EYIDLLQ  280 (281)
T ss_dssp             HHHHHHT
T ss_pred             HHHHHhc
Confidence            9999985

>d1eq2a_ c.2.1.2 (A:) ADP-L-glycero-D-mannoheptose 6-epimerase {Escherichia coli [TaxId: 562]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Tyrosine-dependent oxidoreductases
domain: ADP-L-glycero-D-mannoheptose 6-epimerase
species: Escherichia coli [TaxId: 562]

Probab=99.91  E-value=3.2e-24  Score=197.08  Aligned_cols=145  Identities=14%  Similarity=0.121  Sum_probs=94.6

Q ss_pred             CCCCCceEEEEeCCccccCCCC------CCHHHHHHHHHcCCCCee-ecCCCcceeceeHHHHHHHHHHHHhccccCCCC
Q 017760           68 NNRKCLYTCAVRPAAIYGPGEE------RHLPRIVSLAKLGLVPFK-IGEPSVKTDWIYVDNLVLALILASMGLLDDIPG  140 (366)
Q Consensus        68 ~~~~~l~~~ilRp~~iyGp~~~------~~l~~~i~~~~~g~~~~~-~g~~~~~~~~v~vdDla~a~~~a~~~l~~~~~~  140 (366)
                      ....+++++++||+++|||+..      .....+.+.+..|+...+ .|++...++|+|++|+++++..+++.       
T Consensus       155 ~~~~~~~~~~~r~~~vyGp~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~r~~~~v~d~~~~~~~~~~~-------  227 (307)
T d1eq2a_         155 LPEANSQIVGFRYFNVYGPREGHKGSMASVAFHLNTQLNNGESPKLFEGSENFKRDFVYVGDVADVNLWFLEN-------  227 (307)
T ss_dssp             GGGCSSCEEEEEECEEESSSCGGGGGGSCHHHHHHHHHHC-------------CBCEEEHHHHHHHHHHHHHH-------
T ss_pred             ccccccccccccceeEeeccccccccccccccccccccccccceeeecCccceeeeeeecccHHHHHHHHhhh-------
Confidence            4567899999999999999763      345677778888765444 47888899999999999999999873       


Q ss_pred             CCCCCCCCCccEEecCCCCCCHHHHHHHHHHhcCCCCCccccCHHHHHHHHHHHHHHHHhhhhccccccCCCCCCcHHhh
Q 017760          141 QKGRPIASGQPYFVSDGFPINTFEFIGPLLKTLDYDLPKSWLAVPHALFLGKVFSFFYSVLYPWLNRWWLPQPLILPAEV  220 (366)
Q Consensus       141 ~~~~~~~~g~~y~I~~~~~vs~~e~~~~l~~~lg~~~~~~~lp~~~~~~~a~~~e~~~~~~~~~~~~~~~~~p~l~~~ev  220 (366)
                            ...+.||++++++.|+.|+++.+.+..+.. ....+|.+                            ...+.. 
T Consensus       228 ------~~~~~~~~~~~~~~si~~i~~~i~~~~~~~-~i~~~~~~----------------------------~~~~~~-  271 (307)
T d1eq2a_         228 ------GVSGIFNLGTGRAESFQAVADATLAYHKKG-QIEYIPFP----------------------------DKLKGR-  271 (307)
T ss_dssp             ------CCCEEEEESCSCCBCHHHHHHHC---------------------------------------------------
T ss_pred             ------ccccccccccccchhHHHHHHHHHHhcCCC-CeeEeeCC----------------------------ccCCCC-
Confidence                  235689999999999999999998765532 11111110                            000000 


Q ss_pred             hhhcccceecHHHHHHhcCCCCCCChHHHHHHHHHHH
Q 017760          221 YKVGVTHYFSLLKAKDELCYVPIVSPREGMAATISYW  257 (366)
Q Consensus       221 ~~~~~~~~~d~~ka~~~LG~~p~~~~~e~l~~~v~~~  257 (366)
                        .......|++|+++.+||+|.++++|+|+++++|+
T Consensus       272 --~~~~~~~d~~k~~~~~~~~p~~sl~egi~~~i~w~  306 (307)
T d1eq2a_         272 --YQAFTQADLTNLRAAGYDKPFKTVAEGVTEYMAWL  306 (307)
T ss_dssp             --CCCSCCBCCHHHHHTTCCCCCCCHHHHHHHHHHHT
T ss_pred             --CceeeecCHHHHHHHHCCCCCCCHHHHHHHHHHhC
Confidence              01111358999999999999999999999999996

>d1e6ua_ c.2.1.2 (A:) GDP-4-keto-6-deoxy-d-mannose epimerase/reductase (GDP-fucose synthetase) {Escherichia coli [TaxId: 562]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Tyrosine-dependent oxidoreductases
domain: GDP-4-keto-6-deoxy-d-mannose epimerase/reductase (GDP-fucose synthetase)
species: Escherichia coli [TaxId: 562]

Probab=99.89  E-value=5.5e-23  Score=190.59  Aligned_cols=153  Identities=16%  Similarity=0.183  Sum_probs=111.5

Q ss_pred             CCCceEEEEeCCccccCCCCC-----C-HH-----HHHHHHHcCCCCeeecCCCcceeceeHHHHHHHHHHHHhccccCC
Q 017760           70 RKCLYTCAVRPAAIYGPGEER-----H-LP-----RIVSLAKLGLVPFKIGEPSVKTDWIYVDNLVLALILASMGLLDDI  138 (366)
Q Consensus        70 ~~~l~~~ilRp~~iyGp~~~~-----~-l~-----~~i~~~~~g~~~~~~g~~~~~~~~v~vdDla~a~~~a~~~l~~~~  138 (366)
                      ..+++++++||++||||++..     . ..     .......++..+.+.|++.+.++++|++|+++++..++++.....
T Consensus       152 ~~gl~~~ilR~~~vyGp~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~g~~~~~~~~v~d~~~~~~~~~~~~~~~~  231 (315)
T d1e6ua_         152 QYGRDYRSVMPTNLYGPHDNFHPSNSHVIPALLRRFHEATAQKAPDVVVWGSGTPMREFLHVDDMAAASIHVMELAHEVW  231 (315)
T ss_dssp             HHCCEEEEEEECEEESTTCCCCTTCSSHHHHHHHHHHHHHHHTCSEEEEESCSCCEECEEEHHHHHHHHHHHHHSCHHHH
T ss_pred             HhCCCEEEEeeccEECCCCCCCccccccceeeeccchhhhhccCCceEEcCCCceEEEEEEeehhHHHHHHhhhhccccc
Confidence            347899999999999998642     1 11     223445567777888999999999999999999999986421100


Q ss_pred             CCCCCCCCCCCccEEecCCCCCCHHHHHHHHHHhcCCCCCccccCHHHHHHHHHHHHHHHHhhhhccccccCCCCCCcHH
Q 017760          139 PGQKGRPIASGQPYFVSDGFPINTFEFIGPLLKTLDYDLPKSWLAVPHALFLGKVFSFFYSVLYPWLNRWWLPQPLILPA  218 (366)
Q Consensus       139 ~~~~~~~~~~g~~y~I~~~~~vs~~e~~~~l~~~lg~~~~~~~lp~~~~~~~a~~~e~~~~~~~~~~~~~~~~~p~l~~~  218 (366)
                         ..........++++.+.+.+..++++.+.+.+|.+......|                           ..|    .
T Consensus       232 ---~~~~~~~~~~~~~~~~~~~~i~~~~~~i~~~~~~~~~i~~~~---------------------------~~~----~  277 (315)
T d1e6ua_         232 ---LENTQPMLSHINVGTGVDCTIRELAQTIAKVVGYKGRVVFDA---------------------------SKP----D  277 (315)
T ss_dssp             ---HHTSBTTBCCEEESCSCCEEHHHHHHHHHHHHTCCSEEEEET---------------------------TSC----C
T ss_pred             ---cccccccccccccCCCcchHHHHHHHHHHHHhCCCcceEECC---------------------------CCC----C
Confidence               001133456799999999999999999999999875432211                           111    1


Q ss_pred             hhhhhcccceecHHHHHHhcCCCCCCChHHHHHHHHHHHHhcc
Q 017760          219 EVYKVGVTHYFSLLKAKDELCYVPIVSPREGMAATISYWQDRK  261 (366)
Q Consensus       219 ev~~~~~~~~~d~~ka~~~LG~~p~~~~~e~l~~~v~~~~~~~  261 (366)
                      +.    .....|++|++ +|||+|+++++|+|+++++||++++
T Consensus       278 ~~----~~~~~d~sk~k-~Lg~~p~~~l~e~i~~ti~w~~~N~  315 (315)
T d1e6ua_         278 GT----PRKLLDVTRLH-QLGWYHEISLEAGLASTYQWFLENQ  315 (315)
T ss_dssp             CC----SBCCBCCHHHH-HTTCCCCCCHHHHHHHHHHHHHHTC
T ss_pred             CC----ceeccCHHHHH-HcCCCCCCCHHHHHHHHHHHHHHcC
Confidence            11    11257999997 5999999999999999999999764

>d1qyca_ c.2.1.2 (A:) Phenylcoumaran benzylic ether reductase {Loblolly pine (Pinus taeda) [TaxId: 3352]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Tyrosine-dependent oxidoreductases
domain: Phenylcoumaran benzylic ether reductase
species: Loblolly pine (Pinus taeda) [TaxId: 3352]

Probab=99.83  E-value=6.8e-22  Score=180.54  Aligned_cols=165  Identities=13%  Similarity=0.123  Sum_probs=128.2

Q ss_pred             cCCeEEEEcCCChhHHHHHHHHHHcCCceEEEEecCCCCccc-------ccccCCCeEEEEcc-----------------
Q 017760           10 EGKTFLVTGGLGHVGSALCLELVRRGAYQVRAFDLRTNSPWS-------HLLINHGVHCIQGL-----------------   65 (366)
Q Consensus        10 ~~~~VlITGgtGfiG~~L~~~L~~~g~~~V~~~dr~~~~~~~-------~~~~~~~v~~i~gD-----------------   65 (366)
                      +++||||||||||+|++++++|+++| ++|++++|++.....       ......+++++.+|                 
T Consensus         2 ~kkKILVtGatG~iG~~l~~~L~~~G-~~V~~l~R~~~~~~~~~~~~~~~~~~~~~~~~~~~d~~~~~~~~~~~~~~~~v   80 (307)
T d1qyca_           2 SRSRILLIGATGYIGRHVAKASLDLG-HPTFLLVRESTASSNSEKAQLLESFKASGANIVHGSIDDHASLVEAVKNVDVV   80 (307)
T ss_dssp             CCCCEEEESTTSTTHHHHHHHHHHTT-CCEEEECCCCCTTTTHHHHHHHHHHHTTTCEEECCCTTCHHHHHHHHHTCSEE
T ss_pred             CCCEEEEECCCcHHHHHHHHHHHHCC-CeEEEEECCCccccchhHHHHHHhhccCCcEEEEeecccchhhhhhhhhceee
Confidence            46789999999999999999999999 599999998655422       12224678889888                 


Q ss_pred             ---------------------------------------------------------ccCCCCCceEEEEeCCccccCCC
Q 017760           66 ---------------------------------------------------------RKNNRKCLYTCAVRPAAIYGPGE   88 (366)
Q Consensus        66 ---------------------------------------------------------ks~~~~~l~~~ilRp~~iyGp~~   88 (366)
                                                                               +.....+++++++||+.+||++.
T Consensus        81 i~~~~~~~~~~~~~~~~a~~~~~~~~~~~~s~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~r~~~v~g~~~  160 (307)
T d1qyca_          81 ISTVGSLQIESQVNIIKAIKEVGTVKRFFPSEFGNDVDNVHAVEPAKSVFEVKAKVRRAIEAEGIPYTYVSSNCFAGYFL  160 (307)
T ss_dssp             EECCCGGGSGGGHHHHHHHHHHCCCSEEECSCCSSCTTSCCCCTTHHHHHHHHHHHHHHHHHHTCCBEEEECCEEHHHHT
T ss_pred             eecccccccchhhHHHHHHHHhccccceeeeccccccccccccccccccccccccccchhhccCCCceecccceecCCCc
Confidence                                                                     01234577899999999999876


Q ss_pred             CCCHHHHHHHHHcCCCCeeecCCCcceeceeHHHHHHHHHHHHhccccCCCCCCCCCCCCCcc-EEecCCCCCCHHHHHH
Q 017760           89 ERHLPRIVSLAKLGLVPFKIGEPSVKTDWIYVDNLVLALILASMGLLDDIPGQKGRPIASGQP-YFVSDGFPINTFEFIG  167 (366)
Q Consensus        89 ~~~l~~~i~~~~~g~~~~~~g~~~~~~~~v~vdDla~a~~~a~~~l~~~~~~~~~~~~~~g~~-y~I~~~~~vs~~e~~~  167 (366)
                      .. +..+.....++.....++++++.++|+|++|+|++++.+++           .+...++. |++++++.+|+.|+++
T Consensus       161 ~~-~~~~~~~~~~~~~~~~~~~~~~~~~~i~v~Dva~~~~~~l~-----------~~~~~~~~~~~~~~~~~~s~~ei~~  228 (307)
T d1qyca_         161 RS-LAQAGLTAPPRDKVVILGDGNARVVFVKEEDIGTFTIKAVD-----------DPRTLNKTLYLRLPANTLSLNELVA  228 (307)
T ss_dssp             TT-TTCTTCSSCCSSEEEEETTSCCEEEEECHHHHHHHHHTTSS-----------CGGGTTEEEECCCGGGEEEHHHHHH
T ss_pred             cc-hhhhhhhhhhcccceeeecccccccCCcHHHHHHHHHHHhc-----------ChhhcCceeEEeCCCCccCHHHHHH
Confidence            53 22233334455556778899999999999999999999986           44445554 5667788999999999


Q ss_pred             HHHHhcCCCCCccccCHHHH
Q 017760          168 PLLKTLDYDLPKSWLAVPHA  187 (366)
Q Consensus       168 ~l~~~lg~~~~~~~lp~~~~  187 (366)
                      .+.+.+|.+.+...+|....
T Consensus       229 ~~~~~~G~~~~~~~~~~~~~  248 (307)
T d1qyca_         229 LWEKKIDKTLEKAYVPEEEV  248 (307)
T ss_dssp             HHHHHTTSCCEEEEECHHHH
T ss_pred             HHHHHHCCCCcEEECCHHHH
Confidence            99999999988788887643

>d1y1pa1 c.2.1.2 (A:2-343) Aldehyde reductase II {Sporobolomyces salmonicolor [TaxId: 5005]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Tyrosine-dependent oxidoreductases
domain: Aldehyde reductase II
species: Sporobolomyces salmonicolor [TaxId: 5005]

Probab=99.82  E-value=2.3e-20  Score=175.14  Aligned_cols=139  Identities=11%  Similarity=-0.067  Sum_probs=95.4

Q ss_pred             CceEEEEeCCccccCCC-----CCCHHHHHHHHHcCCCCeeecCCCcceeceeHHHHHHHHHHHHhccccCCCCCCCCCC
Q 017760           72 CLYTCAVRPAAIYGPGE-----ERHLPRIVSLAKLGLVPFKIGEPSVKTDWIYVDNLVLALILASMGLLDDIPGQKGRPI  146 (366)
Q Consensus        72 ~l~~~ilRp~~iyGp~~-----~~~l~~~i~~~~~g~~~~~~g~~~~~~~~v~vdDla~a~~~a~~~l~~~~~~~~~~~~  146 (366)
                      +++.+++||+.+|||..     ...+..++..+.+|...... .+...++|+||+|+|++++.+++           .+.
T Consensus       197 ~~~~~~i~p~~v~Gp~~~~~~~~~~~~~~~~~l~~g~~~~~~-~~~~~~~~v~v~Dva~~~i~~l~-----------~~~  264 (342)
T d1y1pa1         197 HFTLNAVLPNYTIGTIFDPETQSGSTSGWMMSLFNGEVSPAL-ALMPPQYYVSAVDIGLLHLGCLV-----------LPQ  264 (342)
T ss_dssp             SSEEEEEEESEEECCCSCTTTCCCHHHHHHHHHHTTCCCHHH-HTCCSEEEEEHHHHHHHHHHHHH-----------CTT
T ss_pred             ccccceecccceeCCCCCccccccchHHHHHHHHcCCcCccc-CCccceeeeeHHHHHHHHHHhhc-----------Ccc
Confidence            56789999999999953     23467778888888765433 34566899999999999999997           444


Q ss_pred             CCCccEEecCCCCCCHHHHHHHHHHhcCCCCCccccCHHHHHHHHHHHHHHHHhhhhccccccCCCCCCcHHhhhhhccc
Q 017760          147 ASGQPYFVSDGFPINTFEFIGPLLKTLDYDLPKSWLAVPHALFLGKVFSFFYSVLYPWLNRWWLPQPLILPAEVYKVGVT  226 (366)
Q Consensus       147 ~~g~~y~I~~~~~vs~~e~~~~l~~~lg~~~~~~~lp~~~~~~~a~~~e~~~~~~~~~~~~~~~~~p~l~~~ev~~~~~~  226 (366)
                      ..| .||++.++++|+.|+++.+.+.++...-...+|                           ..+.    .....  +
T Consensus       265 ~~g-~~~~~~~~~~t~~eia~~i~k~~p~~~~~~~~~---------------------------~~~~----~~~~~--~  310 (342)
T d1y1pa1         265 IER-RRVYGTAGTFDWNTVLATFRKLYPSKTFPADFP---------------------------DQGQ----DLSKF--D  310 (342)
T ss_dssp             CCS-CEEEECCEEECHHHHHHHHHHHCTTSCCCCCCC---------------------------CCCC----CCCEE--C
T ss_pred             ccc-eEEEEcCCceEHHHHHHHHHHHcCCCcCCccCC---------------------------ccCc----ccccc--c
Confidence            444 566888889999999999999874321111111                           0000    00000  1


Q ss_pred             ceecHHHHHHhcCCCCCCChHHHHHHHHHHH
Q 017760          227 HYFSLLKAKDELCYVPIVSPREGMAATISYW  257 (366)
Q Consensus       227 ~~~d~~ka~~~LG~~p~~~~~e~l~~~v~~~  257 (366)
                       .-.+.+..+.+||.|.++++++|+++++.+
T Consensus       311 -~~~s~~~~k~lg~~~~~~lee~i~d~I~s~  340 (342)
T d1y1pa1         311 -TAPSLEILKSLGRPGWRSIEESIKDLVGSE  340 (342)
T ss_dssp             -CHHHHHHHHHTTCCSCCCHHHHHHHHHCCS
T ss_pred             -chHHHHHHHHcCCCCCcCHHHHHHHHHHhC
Confidence             112334445699999999999999999765

>d1qyda_ c.2.1.2 (A:) Pinoresinol-lariciresinol reductase {Giant arborvitae (Thuja plicata) [TaxId: 3316]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Tyrosine-dependent oxidoreductases
domain: Pinoresinol-lariciresinol reductase
species: Giant arborvitae (Thuja plicata) [TaxId: 3316]

Probab=99.81  E-value=2e-21  Score=178.60  Aligned_cols=164  Identities=14%  Similarity=0.081  Sum_probs=126.9

Q ss_pred             cCCeEEEEcCCChhHHHHHHHHHHcCCceEEEEecCCCCccc------ccccCCCeEEEEcc------------------
Q 017760           10 EGKTFLVTGGLGHVGSALCLELVRRGAYQVRAFDLRTNSPWS------HLLINHGVHCIQGL------------------   65 (366)
Q Consensus        10 ~~~~VlITGgtGfiG~~L~~~L~~~g~~~V~~~dr~~~~~~~------~~~~~~~v~~i~gD------------------   65 (366)
                      +++||||||||||+|++|+++|+++| |+|++++|++.....      ......+++++++|                  
T Consensus         2 ~k~KILVtGatG~iG~~l~~~L~~~G-~~V~~~~R~~~~~~~~~~~~~~~~~~~~v~~v~~d~~d~~~~~~~~~~~~~~~   80 (312)
T d1qyda_           2 KKSRVLIVGGTGYIGKRIVNASISLG-HPTYVLFRPEVVSNIDKVQMLLYFKQLGAKLIEASLDDHQRLVDALKQVDVVI   80 (312)
T ss_dssp             CCCCEEEESTTSTTHHHHHHHHHHTT-CCEEEECCSCCSSCHHHHHHHHHHHTTTCEEECCCSSCHHHHHHHHTTCSEEE
T ss_pred             CCCEEEEECCCCHHHHHHHHHHHhCC-CEEEEEECCCcccchhHHHHHhhhccCCcEEEEeecccchhhhhhccCcchhh
Confidence            35789999999999999999999999 699999987654322      12234678899888                  


Q ss_pred             -------------------------------------------------------------ccCCCCCceEEEEeCCccc
Q 017760           66 -------------------------------------------------------------RKNNRKCLYTCAVRPAAIY   84 (366)
Q Consensus        66 -------------------------------------------------------------ks~~~~~l~~~ilRp~~iy   84 (366)
                                                                                   +.....+++++++||+.+|
T Consensus        81 ~~~~~~~~~~~~~~~~~~l~~a~~~~~~~~v~~Ss~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~r~~~~~  160 (312)
T d1qyda_          81 SALAGGVLSHHILEQLKLVEAIKEAGNIKRFLPSEFGMDPDIMEHALQPGSITFIDKRKVRRAIEAASIPYTYVSSNMFA  160 (312)
T ss_dssp             ECCCCSSSSTTTTTHHHHHHHHHHSCCCSEEECSCCSSCTTSCCCCCSSTTHHHHHHHHHHHHHHHTTCCBCEEECCEEH
T ss_pred             hhhhhcccccchhhhhHHHHHHHHhcCCcEEEEeeccccCCCcccccchhhhhhHHHHHHHHhhcccccceEEeccceee
Confidence                                                                         0123457889999999999


Q ss_pred             cCCCCCCHHHHHHHHHcCCCCeeecCCCcceeceeHHHHHHHHHHHHhccccCCCCCCCCCCCCCcc-EEecCCCCCCHH
Q 017760           85 GPGEERHLPRIVSLAKLGLVPFKIGEPSVKTDWIYVDNLVLALILASMGLLDDIPGQKGRPIASGQP-YFVSDGFPINTF  163 (366)
Q Consensus        85 Gp~~~~~l~~~i~~~~~g~~~~~~g~~~~~~~~v~vdDla~a~~~a~~~l~~~~~~~~~~~~~~g~~-y~I~~~~~vs~~  163 (366)
                      |+...............+....+++++++.++|+|++|+|++++.+++           .+...++. |++++++.+|+.
T Consensus       161 g~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~i~v~Dva~a~~~~l~-----------~~~~~~~~~~~~~~~~~~s~~  229 (312)
T d1qyda_         161 GYFAGSLAQLDGHMMPPRDKVLIYGDGNVKGIWVDEDDVGTYTIKSID-----------DPQTLNKTMYIRPPMNILSQK  229 (312)
T ss_dssp             HHHTTTSSCTTCCSSCCSSEECCBTTSCSEEEEECHHHHHHHHHHHTT-----------CGGGSSSEEECCCGGGEEEHH
T ss_pred             cCCccchhhHHHHhhhcccccccccccccccceeeHHHHHHHHHHHhc-----------CccccCceEEEeCCCcCCCHH
Confidence            986543332222223344555678999999999999999999999997           44555665 566667789999


Q ss_pred             HHHHHHHHhcCCCCCccccCHH
Q 017760          164 EFIGPLLKTLDYDLPKSWLAVP  185 (366)
Q Consensus       164 e~~~~l~~~lg~~~~~~~lp~~  185 (366)
                      |+++.+.+.+|.+.+...+|..
T Consensus       230 e~~~~~~~~~g~~~~~~~i~~~  251 (312)
T d1qyda_         230 EVIQIWERLSEQNLDKIYISSQ  251 (312)
T ss_dssp             HHHHHHHHHHTCCCEECCBCSH
T ss_pred             HHHHHHHHHHCCCCeEEECCHH
Confidence            9999999999999888888865

>d1n2sa_ c.2.1.2 (A:) dTDP-6-deoxy-L-lyxo-4-hexulose reductase (RmlD) {Salmonella enterica serovar typhimurium [TaxId: 90371]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Tyrosine-dependent oxidoreductases
domain: dTDP-6-deoxy-L-lyxo-4-hexulose reductase (RmlD)
species: Salmonella enterica serovar typhimurium [TaxId: 90371]

Probab=99.71  E-value=1.4e-17  Score=151.50  Aligned_cols=151  Identities=12%  Similarity=-0.002  Sum_probs=96.7

Q ss_pred             EEEEeCCccccCCCCCCHHHHHHHHHcCCCCeeecCCCcceeceeHHHHHHHHHHHHhccccCCCCCCCCCCCCCccEEe
Q 017760           75 TCAVRPAAIYGPGEERHLPRIVSLAKLGLVPFKIGEPSVKTDWIYVDNLVLALILASMGLLDDIPGQKGRPIASGQPYFV  154 (366)
Q Consensus        75 ~~ilRp~~iyGp~~~~~l~~~i~~~~~g~~~~~~g~~~~~~~~v~vdDla~a~~~a~~~l~~~~~~~~~~~~~~g~~y~I  154 (366)
                      .+++|++..|+.........+...+..+..+...+  ....+++|++|+++++..+++.+..        ....+++||+
T Consensus       146 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~--~~~~~~~~~~d~~~~~~~~i~~~~~--------~~~~~~~~n~  215 (298)
T d1n2sa_         146 HLIFRTSWVYAGKGNNFAKTMLRLAKERQTLSVIN--DQYGAPTGAELLADCTAHAIRVALN--------KPEVAGLYHL  215 (298)
T ss_dssp             EEEEEECSEECSSSCCHHHHHHHHHHHCSEEEEEC--SCEECCEEHHHHHHHHHHHHHHHHH--------CGGGCEEEEC
T ss_pred             cccccccceeeccCCccchhhhhhhcccceeeccc--ceeecccccchHHHHHHHHHhhhhc--------cccccccccc
Confidence            55666666665544445566666666666544443  4678999999999999888764322        2345789999


Q ss_pred             cCCCCCCHHHHHHHHHHhcCCCCCccccCHHHHHHHHHHHHHHHHhhhhccccccCCCCCCcHHhhhhhcccceecHHHH
Q 017760          155 SDGFPINTFEFIGPLLKTLDYDLPKSWLAVPHALFLGKVFSFFYSVLYPWLNRWWLPQPLILPAEVYKVGVTHYFSLLKA  234 (366)
Q Consensus       155 ~~~~~vs~~e~~~~l~~~lg~~~~~~~lp~~~~~~~a~~~e~~~~~~~~~~~~~~~~~p~l~~~ev~~~~~~~~~d~~ka  234 (366)
                      ++++.++..|+++.+.+..+.......++.                ..+.....+ +.+.-+|       ....+|++|+
T Consensus       216 ~~~~~~~~~~~~~~i~~~~~~~~~~~~~~~----------------~~~i~~~~~-~~~a~RP-------~~~~ld~~K~  271 (298)
T d1n2sa_         216 VAGGTTTWHDYAALVFDEARKAGITLALTE----------------LNAVPTSAY-PTPASRP-------GNSRLNTEKF  271 (298)
T ss_dssp             CCBSCEEHHHHHHHHHHHHHHHTCCCCCCE----------------EEEECSTTS-CCSSCCC-------SBCCBCCHHH
T ss_pred             cCCCceecHHHHHHHHhhhhccCccccccc----------------eeeeehhhc-CccCCCc-------cccccCHHHH
Confidence            999999999999998876643221111100                000000000 0000000       1124799999


Q ss_pred             HHhcCCCCCCChHHHHHHHHHHHHhc
Q 017760          235 KDELCYVPIVSPREGMAATISYWQDR  260 (366)
Q Consensus       235 ~~~LG~~p~~~~~e~l~~~v~~~~~~  260 (366)
                      ++++||+|+ +++++|+++++.+...
T Consensus       272 ~~~~~~~~~-~~~~gl~~~i~~~~~~  296 (298)
T d1n2sa_         272 QRNFDLILP-QWELGVKRMLTEMFTT  296 (298)
T ss_dssp             HHHHTCCCC-BHHHHHHHHHHHHHSC
T ss_pred             HHHHCCCCC-cHHHHHHHHHHHHHhh
Confidence            999999997 9999999999988653

>d2q46a1 c.2.1.2 (A:2-253) Hypothetical protein At5g02240 (T7H20_290) {Thale cress (Arabidopsis thaliana) [TaxId: 3702]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Tyrosine-dependent oxidoreductases
domain: Hypothetical protein At5g02240 (T7H20 290)
species: Thale cress (Arabidopsis thaliana) [TaxId: 3702]

Probab=99.64  E-value=1.9e-17  Score=145.66  Aligned_cols=85  Identities=11%  Similarity=0.018  Sum_probs=57.8

Q ss_pred             CCCceEEEEeCCccccCCCCCCHHHHHHHHHcCCCCeeecCCCcceeceeHHHHHHHHHHHHhccccCCCCCCCCCCCCC
Q 017760           70 RKCLYTCAVRPAAIYGPGEERHLPRIVSLAKLGLVPFKIGEPSVKTDWIYVDNLVLALILASMGLLDDIPGQKGRPIASG  149 (366)
Q Consensus        70 ~~~l~~~ilRp~~iyGp~~~~~l~~~i~~~~~g~~~~~~g~~~~~~~~v~vdDla~a~~~a~~~l~~~~~~~~~~~~~~g  149 (366)
                      ..+++++++||+++||+..... .    .. .+.... .  .....+++|++|+|++++.+++           ++...|
T Consensus       163 ~~~~~~~ilRp~~v~g~~~~~~-~----~~-~~~~~~-~--~~~~~~~i~~~Dva~a~~~~l~-----------~~~~~g  222 (252)
T d2q46a1         163 DSGTPYTIIRAGGLLDKEGGVR-E----LL-VGKDDE-L--LQTDTKTVPRADVAEVCIQALL-----------FEEAKN  222 (252)
T ss_dssp             HSSSCEEEEEECEEECSCTTSS-C----EE-EESTTG-G--GGSSCCEEEHHHHHHHHHHHTT-----------CGGGTT
T ss_pred             cccccceeecceEEECCCcchh-h----hh-hccCcc-c--ccCCCCeEEHHHHHHHHHHHhC-----------CccccC
Confidence            4588999999999999975421 0    00 111101 1  1234679999999999999997           566788


Q ss_pred             ccEEecCCC---CCCHHHHHHHHHHhcC
Q 017760          150 QPYFVSDGF---PINTFEFIGPLLKTLD  174 (366)
Q Consensus       150 ~~y~I~~~~---~vs~~e~~~~l~~~lg  174 (366)
                      ++|||+++.   ..+..|+.+.+.+..+
T Consensus       223 ~~~~i~~~~~~~~~~~~~~~~lf~~i~~  250 (252)
T d2q46a1         223 KAFDLGSKPEGTSTPTKDFKALFSQVTS  250 (252)
T ss_dssp             EEEEEEECCTTTSCCCCCHHHHHTTCCC
T ss_pred             cEEEEeeCCCCCChhHHHHHHHHHHHHh
Confidence            999998643   4567777766655443

>d1hdoa_ c.2.1.2 (A:) Biliverdin IX beta reductase {Human (Homo sapiens) [TaxId: 9606]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Tyrosine-dependent oxidoreductases
domain: Biliverdin IX beta reductase
species: Human (Homo sapiens) [TaxId: 9606]

Probab=99.55  E-value=8.7e-15  Score=126.72  Aligned_cols=121  Identities=17%  Similarity=0.103  Sum_probs=94.7

Q ss_pred             ccCCeEEEEcCCChhHHHHHHHHHHcCCceEEEEecCCCCcccccccCCCeEEEEcc-----------------------
Q 017760            9 IEGKTFLVTGGLGHVGSALCLELVRRGAYQVRAFDLRTNSPWSHLLINHGVHCIQGL-----------------------   65 (366)
Q Consensus         9 ~~~~~VlITGgtGfiG~~L~~~L~~~g~~~V~~~dr~~~~~~~~~~~~~~v~~i~gD-----------------------   65 (366)
                      |.|+||+||||||++|++++++|+++| ++|++++|++.+.  .....++++++++|                       
T Consensus         1 m~~kkIlV~GatG~iG~~v~~~Ll~~g-~~V~~~~R~~~~~--~~~~~~~~~~~~gD~~d~~~l~~al~~~d~vi~~~g~   77 (205)
T d1hdoa_           1 MAVKKIAIFGATGQTGLTTLAQAVQAG-YEVTVLVRDSSRL--PSEGPRPAHVVVGDVLQAADVDKTVAGQDAVIVLLGT   77 (205)
T ss_dssp             CCCCEEEEESTTSHHHHHHHHHHHHTT-CEEEEEESCGGGS--CSSSCCCSEEEESCTTSHHHHHHHHTTCSEEEECCCC
T ss_pred             CCCCEEEEECCCCHHHHHHHHHHHHCc-CEEEEEEcChhhc--ccccccccccccccccchhhHHHHhcCCCEEEEEecc
Confidence            678999999999999999999999999 5999999986542  23345778999999                       


Q ss_pred             -----------------------------------------------------------ccCCCCCceEEEEeCCccccC
Q 017760           66 -----------------------------------------------------------RKNNRKCLYTCAVRPAAIYGP   86 (366)
Q Consensus        66 -----------------------------------------------------------ks~~~~~l~~~ilRp~~iyGp   86 (366)
                                                                                 +..++.++++|++||+.+++.
T Consensus        78 ~~~~~~~~~~~~~~~~l~~aa~~~~v~r~i~~ss~~~~~~~~~~~~~~~~~~~~~~~~e~~l~~~~~~~tiirp~~~~~~  157 (205)
T d1hdoa_          78 RNDLSPTTVMSEGARNIVAAMKAHGVDKVVACTSAFLLWDPTKVPPRLQAVTDDHIRMHKVLRESGLKYVAVMPPHIGDQ  157 (205)
T ss_dssp             TTCCSCCCHHHHHHHHHHHHHHHHTCCEEEEECCGGGTSCTTCSCGGGHHHHHHHHHHHHHHHHTCSEEEEECCSEEECC
T ss_pred             CCchhhhhhhHHHHHHHHHHHHhcCCCeEEEEeeeeccCCCccccccccccchHHHHHHHHHHhcCCceEEEecceecCC
Confidence                                                                       113346789999999999875


Q ss_pred             CCCCCHHHHHHHHHcCCCCeeecCCCcceeceeHHHHHHHHHHHHhccccCCCCCCCCCCCCCccEEecC
Q 017760           87 GEERHLPRIVSLAKLGLVPFKIGEPSVKTDWIYVDNLVLALILASMGLLDDIPGQKGRPIASGQPYFVSD  156 (366)
Q Consensus        87 ~~~~~l~~~i~~~~~g~~~~~~g~~~~~~~~v~vdDla~a~~~a~~~l~~~~~~~~~~~~~~g~~y~I~~  156 (366)
                      ...            +. .....+++....+++++|+|++++.+++           ++...|+.+.++.
T Consensus       158 ~~~------------~~-~~~~~~~~~~~~~i~~~DvA~~~~~~l~-----------~~~~~g~~~~~s~  203 (205)
T d1hdoa_         158 PLT------------GA-YTVTLDGRGPSRVISKHDLGHFMLRCLT-----------TDEYDGHSTYPSH  203 (205)
T ss_dssp             CCC------------SC-CEEESSSCSSCSEEEHHHHHHHHHHTTS-----------CSTTTTCEEEEEC
T ss_pred             CCc------------cc-EEEeeCCCCCCCcCCHHHHHHHHHHHhC-----------CCCCCCEEEecCC
Confidence            322            22 2445567778899999999999999997           5566788887764

>d1xgka_ c.2.1.2 (A:) Negative transcriptional regulator NmrA {Aspergillus nidulans [TaxId: 162425]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Tyrosine-dependent oxidoreductases
domain: Negative transcriptional regulator NmrA
species: Aspergillus nidulans [TaxId: 162425]

Probab=99.53  E-value=1.8e-15  Score=141.54  Aligned_cols=163  Identities=16%  Similarity=0.091  Sum_probs=115.7

Q ss_pred             cCCeEEEEcCCChhHHHHHHHHHHcCCceEEEEecCCCCcccccc-cCCCeEEEEcc-----------------------
Q 017760           10 EGKTFLVTGGLGHVGSALCLELVRRGAYQVRAFDLRTNSPWSHLL-INHGVHCIQGL-----------------------   65 (366)
Q Consensus        10 ~~~~VlITGgtGfiG~~L~~~L~~~g~~~V~~~dr~~~~~~~~~~-~~~~v~~i~gD-----------------------   65 (366)
                      ++++|+|||||||+|+++++.|+++| ++|+++.|++++.....+ ..++++++++|                       
T Consensus         2 ~kktIlVtGatG~iG~~lv~~Ll~~G-~~V~~l~R~~~~~~~~~~~~~~~v~~~~gD~~d~~~~~~~a~~~~~~~~~~~~   80 (350)
T d1xgka_           2 QKKTIAVVGATGRQGASLIRVAAAVG-HHVRAQVHSLKGLIAEELQAIPNVTLFQGPLLNNVPLMDTLFEGAHLAFINTT   80 (350)
T ss_dssp             CCCCEEEESTTSHHHHHHHHHHHHTT-CCEEEEESCSCSHHHHHHHTSTTEEEEESCCTTCHHHHHHHHTTCSEEEECCC
T ss_pred             CCCEEEEECCChHHHHHHHHHHHhCC-CeEEEEECCcchhhhhhhcccCCCEEEEeeCCCcHHHHHHHhcCCceEEeecc
Confidence            35899999999999999999999999 599999998765543332 34689999999                       


Q ss_pred             -----------------------------------------------------ccCCCCCceEEEEeCCccccCCCCCCH
Q 017760           66 -----------------------------------------------------RKNNRKCLYTCAVRPAAIYGPGEERHL   92 (366)
Q Consensus        66 -----------------------------------------------------ks~~~~~l~~~ilRp~~iyGp~~~~~l   92 (366)
                                                                           +.......+++++||+..++.......
T Consensus        81 ~~~~~~~~~~~~~~~aa~~agv~~~v~~Ss~~~~~~~~~~~~~~~~~~k~~~~~~~~~~~~~~~~vr~~~~~~~~~~~~~  160 (350)
T d1xgka_          81 SQAGDEIAIGKDLADAAKRAGTIQHYIYSSMPDHSLYGPWPAVPMWAPKFTVENYVRQLGLPSTFVYAGIYNNNFTSLPY  160 (350)
T ss_dssp             STTSCHHHHHHHHHHHHHHHSCCSEEEEEECCCGGGTSSCCCCTTTHHHHHHHHHHHTSSSCEEEEEECEEGGGCBSSSC
T ss_pred             cccchhhhhhhHHHHHHHHhCCCceEEEeeccccccCCcccchhhhhhHHHHHHHHHhhccCceeeeeceeecccccccc
Confidence                                                                 002344678999999998875322111


Q ss_pred             HHHH-HHHHcCCC-CeeecCCCcceeceeH-HHHHHHHHHHHhccccCCCCCCCCCCCCCccEEecCCCCCCHHHHHHHH
Q 017760           93 PRIV-SLAKLGLV-PFKIGEPSVKTDWIYV-DNLVLALILASMGLLDDIPGQKGRPIASGQPYFVSDGFPINTFEFIGPL  169 (366)
Q Consensus        93 ~~~i-~~~~~g~~-~~~~g~~~~~~~~v~v-dDla~a~~~a~~~l~~~~~~~~~~~~~~g~~y~I~~~~~vs~~e~~~~l  169 (366)
                      +.+. .....|.. ...+.+++...+++++ +|+++++..+++.-         .....|+.|++++ +.+|+.|+++.+
T Consensus       161 ~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~~Dva~~v~~~l~~~---------~~~~~G~~~~~~g-~~~T~~eia~~l  230 (350)
T d1xgka_         161 PLFQMELMPDGTFEWHAPFDPDIPLPWLDAEHDVGPALLQIFKDG---------PQKWNGHRIALTF-ETLSPVQVCAAF  230 (350)
T ss_dssp             SSCBEEECTTSCEEEEESSCTTSCEEEECHHHHHHHHHHHHHHHC---------HHHHTTCEEEECS-EEECHHHHHHHH
T ss_pred             ccccccccccccceeeecccCCCcceEEEeHHHHHHHHHHHHhCC---------hhhcCCeEEEEeC-CcCCHHHHHHHH
Confidence            1000 01122222 1233566778888976 89999999888620         1234688999986 569999999999


Q ss_pred             HHhcCCCCCccccC
Q 017760          170 LKTLDYDLPKSWLA  183 (366)
Q Consensus       170 ~~~lg~~~~~~~lp  183 (366)
                      .+.+|.+.+...+|
T Consensus       231 ~~~~G~~v~~~~vp  244 (350)
T d1xgka_         231 SRALNRRVTYVQVP  244 (350)
T ss_dssp             HHHHTSCEEEEECS
T ss_pred             HHHHCCcceEEECC
Confidence            99999886555555

>d2bkaa1 c.2.1.2 (A:5-236) TAT-interacting protein TIP30 {Human (Homo sapiens) [TaxId: 9606]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Tyrosine-dependent oxidoreductases
domain: TAT-interacting protein TIP30
species: Human (Homo sapiens) [TaxId: 9606]

Probab=99.51  E-value=3.2e-14  Score=125.52  Aligned_cols=117  Identities=16%  Similarity=0.116  Sum_probs=81.8

Q ss_pred             ccCCeEEEEcCCChhHHHHHHHHHHcCC-ceEEEEecCCCCcccccccCCCeEEEEcc----------------------
Q 017760            9 IEGKTFLVTGGLGHVGSALCLELVRRGA-YQVRAFDLRTNSPWSHLLINHGVHCIQGL----------------------   65 (366)
Q Consensus         9 ~~~~~VlITGgtGfiG~~L~~~L~~~g~-~~V~~~dr~~~~~~~~~~~~~~v~~i~gD----------------------   65 (366)
                      |++++|+|||||||+|++|+++|+++|. ++|++++|++.....  .....++...+|                      
T Consensus        12 m~~k~IlItGaTG~iG~~l~~~Ll~~g~~~~v~~~~R~~~~~~~--~~~~~i~~~~~D~~~~~~~~~~~~~~d~vi~~~~   89 (232)
T d2bkaa1          12 MQNKSVFILGASGETGRVLLKEILEQGLFSKVTLIGRRKLTFDE--EAYKNVNQEVVDFEKLDDYASAFQGHDVGFCCLG   89 (232)
T ss_dssp             HTCCEEEEECTTSHHHHHHHHHHHHHTCCSEEEEEESSCCCCCS--GGGGGCEEEECCGGGGGGGGGGGSSCSEEEECCC
T ss_pred             CCCCEEEEECCCcHHHHHHHHHHHhCCCCCEEEEEecChhhhcc--cccceeeeeeeccccccccccccccccccccccc
Confidence            5678999999999999999999999984 589999998754332  223455666666                      


Q ss_pred             ----------------------------------------------------------ccCCCCCc-eEEEEeCCccccC
Q 017760           66 ----------------------------------------------------------RKNNRKCL-YTCAVRPAAIYGP   86 (366)
Q Consensus        66 ----------------------------------------------------------ks~~~~~l-~~~ilRp~~iyGp   86 (366)
                                                                                +...+.++ .++|+||+.+||+
T Consensus        90 ~~~~~~~~~~~~~~~~~~~~~~~~~a~~~~v~~fi~~Ss~~~~~~~~~~Y~~~K~~~E~~l~~~~~~~~~IlRP~~i~G~  169 (232)
T d2bkaa1          90 TTRGKAGAEGFVRVDRDYVLKSAELAKAGGCKHFNLLSSKGADKSSNFLYLQVKGEVEAKVEELKFDRYSVFRPGVLLCD  169 (232)
T ss_dssp             CCHHHHHHHHHHHHHTHHHHHHHHHHHHTTCCEEEEECCTTCCTTCSSHHHHHHHHHHHHHHTTCCSEEEEEECCEEECT
T ss_pred             ccccccchhhhhhhcccccceeeecccccCccccccCCccccccCccchhHHHHHHhhhccccccccceEEecCceeecC
Confidence                                                                      00112244 5899999999999


Q ss_pred             CCCCCH-HHHHHHHHcCCCCeeecCCCcceeceeHHHHHHHHHHHHh
Q 017760           87 GEERHL-PRIVSLAKLGLVPFKIGEPSVKTDWIYVDNLVLALILASM  132 (366)
Q Consensus        87 ~~~~~l-~~~i~~~~~g~~~~~~g~~~~~~~~v~vdDla~a~~~a~~  132 (366)
                      ++.... ..+........     .++......||++|+|+|++.++.
T Consensus       170 ~~~~~~~~~~~~~~~~~~-----~~~~~~~~~I~~~dvA~a~i~~~~  211 (232)
T d2bkaa1         170 RQESRPGEWLVRKFFGSL-----PDSWASGHSVPVVTVVRAMLNNVV  211 (232)
T ss_dssp             TGGGSHHHHHHHHHHCSC-----CTTGGGGTEEEHHHHHHHHHHHHT
T ss_pred             CCcCcHHHHHHHHHhhcc-----CCcccCCCeEEHHHHHHHHHHHHh
Confidence            875433 33333333322     223344567999999999999885

>d2a35a1 c.2.1.2 (A:4-215) Hypothetical protein PA4017 {Pseudomonas aeruginosa [TaxId: 287]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Tyrosine-dependent oxidoreductases
domain: Hypothetical protein PA4017
species: Pseudomonas aeruginosa [TaxId: 287]

Probab=99.31  E-value=7.9e-13  Score=114.47  Aligned_cols=38  Identities=21%  Similarity=0.239  Sum_probs=31.7

Q ss_pred             CCeEEEEcCCChhHHHHHHHHHHcCCc-eEEEEecCCCC
Q 017760           11 GKTFLVTGGLGHVGSALCLELVRRGAY-QVRAFDLRTNS   48 (366)
Q Consensus        11 ~~~VlITGgtGfiG~~L~~~L~~~g~~-~V~~~dr~~~~   48 (366)
                      .+||+|||||||+|++++++|+++|.. +|+++.|++..
T Consensus         2 ~KkIlItGatG~iG~~lv~~L~~~~~~~~v~~~~r~~~~   40 (212)
T d2a35a1           2 PKRVLLAGATGLTGEHLLDRILSEPTLAKVIAPARKALA   40 (212)
T ss_dssp             CCEEEEECTTSHHHHHHHHHHHHCTTCCEEECCBSSCCC
T ss_pred             CCEEEEECCCcHHHHHHHHHHHhCCCeEEEEEEeCCchh
Confidence            379999999999999999999999942 67777776543

>d1ulsa_ c.2.1.2 (A:) beta-keto acyl carrier protein reductase {Thermus thermophilus [TaxId: 274]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Tyrosine-dependent oxidoreductases
domain: beta-keto acyl carrier protein reductase
species: Thermus thermophilus [TaxId: 274]

Probab=98.33  E-value=1.3e-06  Score=76.26  Aligned_cols=56  Identities=21%  Similarity=0.250  Sum_probs=43.8

Q ss_pred             cccCCeEEEEcCCChhHHHHHHHHHHcCCceEEEEecCCCCcccccccCCCeEEEEcc
Q 017760            8 GIEGKTFLVTGGLGHVGSALCLELVRRGAYQVRAFDLRTNSPWSHLLINHGVHCIQGL   65 (366)
Q Consensus         8 ~~~~~~VlITGgtGfiG~~L~~~L~~~g~~~V~~~dr~~~~~~~~~~~~~~v~~i~gD   65 (366)
                      ..++++++||||++-||.++++.|.+.|+ +|++.+|+..... ......+++++++|
T Consensus         2 ~L~gK~~lITGas~GIG~aia~~l~~~G~-~V~~~~r~~~~l~-~~~~~~~~~~~~~D   57 (242)
T d1ulsa_           2 RLKDKAVLITGAAHGIGRATLELFAKEGA-RLVACDIEEGPLR-EAAEAVGAHPVVMD   57 (242)
T ss_dssp             TTTTCEEEEESTTSHHHHHHHHHHHHTTC-EEEEEESCHHHHH-HHHHTTTCEEEECC
T ss_pred             CCCCCEEEEeCCCCHHHHHHHHHHHHCCC-EEEEEECCHHHHH-HHHHHcCCeEEEEe
Confidence            35678999999999999999999999996 8999999753221 11223467788888

>d1h5qa_ c.2.1.2 (A:) Mannitol dehydrogenase {Mushroom (Agaricus bisporus) [TaxId: 5341]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Tyrosine-dependent oxidoreductases
domain: Mannitol dehydrogenase
species: Mushroom (Agaricus bisporus) [TaxId: 5341]

Probab=98.22  E-value=1.4e-06  Score=76.86  Aligned_cols=57  Identities=21%  Similarity=0.184  Sum_probs=45.4

Q ss_pred             cccCCeEEEEcCCChhHHHHHHHHHHcCCceEEEEecCCCCccc--c---cccCCCeEEEEcc
Q 017760            8 GIEGKTFLVTGGLGHVGSALCLELVRRGAYQVRAFDLRTNSPWS--H---LLINHGVHCIQGL   65 (366)
Q Consensus         8 ~~~~~~VlITGgtGfiG~~L~~~L~~~g~~~V~~~dr~~~~~~~--~---~~~~~~v~~i~gD   65 (366)
                      ..++++++||||++-||.++++.|++.|+ +|++.+|+......  .   .....++..+++|
T Consensus         6 ~l~gK~alITGas~GIG~aia~~la~~Ga-~V~i~~r~~~~~~~~~~~~~~~~g~~~~~~~~D   67 (260)
T d1h5qa_           6 SFVNKTIIVTGGNRGIGLAFTRAVAAAGA-NVAVIYRSAADAVEVTEKVGKEFGVKTKAYQCD   67 (260)
T ss_dssp             CCTTEEEEEETTTSHHHHHHHHHHHHTTE-EEEEEESSCTTHHHHHHHHHHHHTCCEEEEECC
T ss_pred             cCCCCEEEEeCCCCHHHHHHHHHHHHCCC-EEEEEECCHHHHHHHHHHHHHHhCCceEEEEcc
Confidence            45678999999999999999999999995 89999998754321  1   1124578889999

>d2a4ka1 c.2.1.2 (A:2-242) beta-keto acyl carrier protein reductase {Thermus thermophilus, TTHB020 [TaxId: 274]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Tyrosine-dependent oxidoreductases
domain: beta-keto acyl carrier protein reductase
species: Thermus thermophilus, TTHB020 [TaxId: 274]

Probab=98.20  E-value=3.8e-06  Score=73.16  Aligned_cols=56  Identities=25%  Similarity=0.250  Sum_probs=43.7

Q ss_pred             ccCCeEEEEcCCChhHHHHHHHHHHcCCceEEEEecCCCCccc-ccccCCCeEEEEcc
Q 017760            9 IEGKTFLVTGGLGHVGSALCLELVRRGAYQVRAFDLRTNSPWS-HLLINHGVHCIQGL   65 (366)
Q Consensus         9 ~~~~~VlITGgtGfiG~~L~~~L~~~g~~~V~~~dr~~~~~~~-~~~~~~~v~~i~gD   65 (366)
                      .++++++||||++-+|.++++.|.++|+ +|++.+|+...... ......++.++++|
T Consensus         3 l~gK~alItGas~GIG~aia~~l~~~G~-~V~~~~r~~~~~~~~~~~~~~~~~~~~~D   59 (241)
T d2a4ka1           3 LSGKTILVTGAASGIGRAALDLFAREGA-SLVAVDREERLLAEAVAALEAEAIAVVAD   59 (241)
T ss_dssp             TTTCEEEEESTTSHHHHHHHHHHHHTTC-EEEEEESCHHHHHHHHHTCCSSEEEEECC
T ss_pred             CCCCEEEEeCCCCHHHHHHHHHHHHCCC-EEEEEECCHHHHHHHHHHcCCceEEEEec
Confidence            3578999999999999999999999995 89999988643211 11123567888999

>d1fmca_ c.2.1.2 (A:) 7-alpha-hydroxysteroid dehydrogenase {Escherichia coli [TaxId: 562]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Tyrosine-dependent oxidoreductases
domain: 7-alpha-hydroxysteroid dehydrogenase
species: Escherichia coli [TaxId: 562]

Probab=98.17  E-value=1.6e-06  Score=76.34  Aligned_cols=64  Identities=19%  Similarity=0.304  Sum_probs=48.4

Q ss_pred             CCccccccccCCeEEEEcCCChhHHHHHHHHHHcCCceEEEEecCCCCccc--ccc--cCCCeEEEEcc
Q 017760            1 MHLSENEGIEGKTFLVTGGLGHVGSALCLELVRRGAYQVRAFDLRTNSPWS--HLL--INHGVHCIQGL   65 (366)
Q Consensus         1 m~~~~~~~~~~~~VlITGgtGfiG~~L~~~L~~~g~~~V~~~dr~~~~~~~--~~~--~~~~v~~i~gD   65 (366)
                      |--++++..++++++||||++-||+++++.|.+.|+ +|++.+|+......  .++  ...++.++++|
T Consensus         1 m~~~d~m~L~gK~alITGas~GIG~aia~~la~~Ga-~V~~~~r~~~~~~~~~~~l~~~g~~~~~~~~D   68 (255)
T d1fmca_           1 MFNSDNLRLDGKCAIITGAGAGIGKEIAITFATAGA-SVVVSDINADAANHVVDEIQQLGGQAFACRCD   68 (255)
T ss_dssp             CCCGGGGCCTTCEEEETTTTSHHHHHHHHHHHTTTC-EEEEEESCHHHHHHHHHHHHHTTCCEEEEECC
T ss_pred             CCCCCCCCCCCCEEEEeCCCcHHHHHHHHHHHHCCC-EEEEEECCHHHHHHHHHHHHHcCCcEEEEEcc
Confidence            444555567889999999999999999999999996 89999987532211  111  13567888999

>d1uzma1 c.2.1.2 (A:9-245) beta-keto acyl carrier protein reductase {Mycobacterium tuberculosis [TaxId: 1773]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Tyrosine-dependent oxidoreductases
domain: beta-keto acyl carrier protein reductase
species: Mycobacterium tuberculosis [TaxId: 1773]

Probab=98.15  E-value=3.4e-06  Score=73.28  Aligned_cols=49  Identities=24%  Similarity=0.389  Sum_probs=41.1

Q ss_pred             ccCCeEEEEcCCChhHHHHHHHHHHcCCceEEEEecCCCCcccccccCCCeEEEEcc
Q 017760            9 IEGKTFLVTGGLGHVGSALCLELVRRGAYQVRAFDLRTNSPWSHLLINHGVHCIQGL   65 (366)
Q Consensus         9 ~~~~~VlITGgtGfiG~~L~~~L~~~g~~~V~~~dr~~~~~~~~~~~~~~v~~i~gD   65 (366)
                      .++++++||||++-||+++++.|.+.|+ +|.+.+|+....       +++..+++|
T Consensus         5 l~gK~~lITGas~GIG~aia~~la~~Ga-~V~~~~r~~~~~-------~~~~~~~~D   53 (237)
T d1uzma1           5 FVSRSVLVTGGNRGIGLAIAQRLAADGH-KVAVTHRGSGAP-------KGLFGVEVD   53 (237)
T ss_dssp             CCCCEEEETTTTSHHHHHHHHHHHHTTC-EEEEEESSSCCC-------TTSEEEECC
T ss_pred             CCCCEEEEeCCCCHHHHHHHHHHHHCCC-EEEEEECCcchh-------cCceEEEEe
Confidence            4678999999999999999999999995 899999986543       345666777

>d1uaya_ c.2.1.2 (A:) Type II 3-hydroxyacyl-CoA dehydrogenase {Thermus thermophilus [TaxId: 274]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Tyrosine-dependent oxidoreductases
domain: Type II 3-hydroxyacyl-CoA dehydrogenase
species: Thermus thermophilus [TaxId: 274]

Probab=98.15  E-value=4.8e-06  Score=71.92  Aligned_cols=36  Identities=42%  Similarity=0.621  Sum_probs=33.2

Q ss_pred             CeEEEEcCCChhHHHHHHHHHHcCCceEEEEecCCCC
Q 017760           12 KTFLVTGGLGHVGSALCLELVRRGAYQVRAFDLRTNS   48 (366)
Q Consensus        12 ~~VlITGgtGfiG~~L~~~L~~~g~~~V~~~dr~~~~   48 (366)
                      |+++||||++-||+++++.|.+.|+ +|++.||++..
T Consensus         2 K~alITGas~GIG~aiA~~la~~Ga-~V~i~~~~~~~   37 (241)
T d1uaya_           2 RSALVTGGASGLGRAAALALKARGY-RVVVLDLRREG   37 (241)
T ss_dssp             CEEEEETTTSHHHHHHHHHHHHHTC-EEEEEESSCCS
T ss_pred             CEEEEeCCCCHHHHHHHHHHHHCCC-EEEEEECCccc
Confidence            6899999999999999999999995 89999998654

>d1pr9a_ c.2.1.2 (A:) Carbonyl reductase {Human (Homo sapiens) [TaxId: 9606]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Tyrosine-dependent oxidoreductases
domain: Carbonyl reductase
species: Human (Homo sapiens) [TaxId: 9606]

Probab=98.14  E-value=3.4e-06  Score=73.63  Aligned_cols=56  Identities=23%  Similarity=0.182  Sum_probs=43.3

Q ss_pred             ccCCeEEEEcCCChhHHHHHHHHHHcCCceEEEEecCCCCcccccccCCCeEEEEcc
Q 017760            9 IEGKTFLVTGGLGHVGSALCLELVRRGAYQVRAFDLRTNSPWSHLLINHGVHCIQGL   65 (366)
Q Consensus         9 ~~~~~VlITGgtGfiG~~L~~~L~~~g~~~V~~~dr~~~~~~~~~~~~~~v~~i~gD   65 (366)
                      .++++++||||++-||.++++.|.+.|+ +|++.||+...........+++..+.+|
T Consensus         5 L~GK~~lITGas~GIG~aia~~la~~G~-~V~~~~r~~~~l~~~~~~~~~~~~~~~D   60 (244)
T d1pr9a_           5 LAGRRVLVTGAGKGIGRGTVQALHATGA-RVVAVSRTQADLDSLVRECPGIEPVCVD   60 (244)
T ss_dssp             CTTCEEEEESTTSHHHHHHHHHHHHTTC-EEEEEESCHHHHHHHHHHSTTCEEEECC
T ss_pred             CCCCEEEEeCCCCHHHHHHHHHHHHcCC-EEEEEECCHHHHHHHHHhcCCCeEEEEe
Confidence            5789999999999999999999999995 8999998753321111122467778888

>d2c07a1 c.2.1.2 (A:54-304) beta-keto acyl carrier protein reductase {Malaria parasite (Plasmodium falciparum) [TaxId: 5833]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Tyrosine-dependent oxidoreductases
domain: beta-keto acyl carrier protein reductase
species: Malaria parasite (Plasmodium falciparum) [TaxId: 5833]

Probab=98.10  E-value=5.4e-06  Score=72.58  Aligned_cols=130  Identities=15%  Similarity=0.091  Sum_probs=88.4

Q ss_pred             ccCCeEEEEcCCChhHHHHHHHHHHcCCceEEEEecCCCCccc--ccc--cCCCeEEEEcc-------------------
Q 017760            9 IEGKTFLVTGGLGHVGSALCLELVRRGAYQVRAFDLRTNSPWS--HLL--INHGVHCIQGL-------------------   65 (366)
Q Consensus         9 ~~~~~VlITGgtGfiG~~L~~~L~~~g~~~V~~~dr~~~~~~~--~~~--~~~~v~~i~gD-------------------   65 (366)
                      .+++.++||||++-||+++++.|.+.|+ +|++.+|+......  ..+  ...++..+++|                   
T Consensus         8 lenKvalITGas~GIG~a~a~~la~~Ga-~V~~~~r~~~~l~~~~~~l~~~g~~~~~~~~Dvt~~~~v~~~~~~~~~~~g   86 (251)
T d2c07a1           8 GENKVALVTGAGRGIGREIAKMLAKSVS-HVICISRTQKSCDSVVDEIKSFGYESSGYAGDVSKKEEISEVINKILTEHK   86 (251)
T ss_dssp             CSSCEEEEESTTSHHHHHHHHHHTTTSS-EEEEEESSHHHHHHHHHHHHTTTCCEEEEECCTTCHHHHHHHHHHHHHHCS
T ss_pred             CCCCEEEEeCCCCHHHHHHHHHHHHcCC-EEEEEECCHHHHHHHHHHHHhcCCcEEEEEccCCCHHHHHHHHHHHHHhcC
Confidence            4578999999999999999999999995 89999987532211  111  13467888888                   


Q ss_pred             --------------------------------------------------------------------------------
Q 017760           66 --------------------------------------------------------------------------------   65 (366)
Q Consensus        66 --------------------------------------------------------------------------------   65 (366)
                                                                                                      
T Consensus        87 ~iDilvnnag~~~~~~~~~~~~~~~~~~~~vNl~~~~~~~~~~~~~m~~~~~G~IVnisS~~~~~~~~~~~~Y~asKaal  166 (251)
T d2c07a1          87 NVDILVNNAGITRDNLFLRMKNDEWEDVLRTNLNSLFYITQPISKRMINNRYGRIINISSIVGLTGNVGQANYSSSKAGV  166 (251)
T ss_dssp             CCCEEEECCCCCCCCCTTTCCHHHHHHHHHHHTTHHHHHHHHHHHHHHHHTCEEEEEECCTHHHHCCTTCHHHHHHHHHH
T ss_pred             CceeeeeccccccccccccccHHHHhhhheeeehhhhhhhhhcCcccccCCCeEEEEECCHHhcCCCCCCHHHHHHHHHH
Confidence                                                                                            


Q ss_pred             ----cc----CCCCCceEEEEeCCccccCCCCCCHHHHHHHHHcCCCCeeecCCCcceeceeHHHHHHHHHHHHhccccC
Q 017760           66 ----RK----NNRKCLYTCAVRPAAIYGPGEERHLPRIVSLAKLGLVPFKIGEPSVKTDWIYVDNLVLALILASMGLLDD  137 (366)
Q Consensus        66 ----ks----~~~~~l~~~ilRp~~iyGp~~~~~l~~~i~~~~~g~~~~~~g~~~~~~~~v~vdDla~a~~~a~~~l~~~  137 (366)
                          ++    ....++++..+.|+.|-.+......+...+.+.+..+.         .-+...+|+++++..++..    
T Consensus       167 ~~ltr~lA~el~~~gIrVN~V~PG~v~T~~~~~~~~~~~~~~~~~~pl---------~R~~~pedvA~~v~fL~S~----  233 (251)
T d2c07a1         167 IGFTKSLAKELASRNITVNAIAPGFISSDMTDKISEQIKKNIISNIPA---------GRMGTPEEVANLACFLSSD----  233 (251)
T ss_dssp             HHHHHHHHHHHGGGTEEEEEEEECSBCC-----CCHHHHHHHHTTCTT---------SSCBCHHHHHHHHHHHHSG----
T ss_pred             HHHHHHHHHHhhhhCeEEEEEccCCEecccccccCHHHHHHHHhcCCC---------CCCcCHHHHHHHHHHHhCc----
Confidence                11    34568999999999997775544445555555544332         1255788999988776631    


Q ss_pred             CCCCCCCCCCCCccEEecCC
Q 017760          138 IPGQKGRPIASGQPYFVSDG  157 (366)
Q Consensus       138 ~~~~~~~~~~~g~~y~I~~~  157 (366)
                           ...-..|+.+.+.+|
T Consensus       234 -----~s~~itG~~i~vDGG  248 (251)
T d2c07a1         234 -----KSGYINGRVFVIDGG  248 (251)
T ss_dssp             -----GGTTCCSCEEEESTT
T ss_pred             -----hhCCCcCcEEEECCC
Confidence                 134567899988776

>d1o5ia_ c.2.1.2 (A:) beta-keto acyl carrier protein reductase {Thermotoga maritima [TaxId: 2336]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Tyrosine-dependent oxidoreductases
domain: beta-keto acyl carrier protein reductase
species: Thermotoga maritima [TaxId: 2336]

Probab=98.08  E-value=3e-06  Score=73.47  Aligned_cols=38  Identities=29%  Similarity=0.344  Sum_probs=34.7

Q ss_pred             cccCCeEEEEcCCChhHHHHHHHHHHcCCceEEEEecCC
Q 017760            8 GIEGKTFLVTGGLGHVGSALCLELVRRGAYQVRAFDLRT   46 (366)
Q Consensus         8 ~~~~~~VlITGgtGfiG~~L~~~L~~~g~~~V~~~dr~~   46 (366)
                      ++++++++||||++-||+++++.|.+.|+ +|.+.+|++
T Consensus         1 gLkgK~~lVTGas~GIG~aia~~l~~~Ga-~V~~~~r~~   38 (234)
T d1o5ia_           1 GIRDKGVLVLAASRGIGRAVADVLSQEGA-EVTICARNE   38 (234)
T ss_dssp             CCTTCEEEEESCSSHHHHHHHHHHHHTTC-EEEEEESCH
T ss_pred             CCCCCEEEEeCCCcHHHHHHHHHHHHCCC-EEEEEECCH
Confidence            35789999999999999999999999995 899999874

>d2o23a1 c.2.1.2 (A:6-253) Type II 3-hydroxyacyl-CoA dehydrogenase {Human (Homo sapiens) [TaxId: 9606]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Tyrosine-dependent oxidoreductases
domain: Type II 3-hydroxyacyl-CoA dehydrogenase
species: Human (Homo sapiens) [TaxId: 9606]

Probab=98.08  E-value=8.2e-06  Score=71.04  Aligned_cols=39  Identities=31%  Similarity=0.480  Sum_probs=35.5

Q ss_pred             ccCCeEEEEcCCChhHHHHHHHHHHcCCceEEEEecCCCC
Q 017760            9 IEGKTFLVTGGLGHVGSALCLELVRRGAYQVRAFDLRTNS   48 (366)
Q Consensus         9 ~~~~~VlITGgtGfiG~~L~~~L~~~g~~~V~~~dr~~~~   48 (366)
                      .++++++||||++-||.+++++|.+.|+ +|++.+|+...
T Consensus         3 lkGKvalITGas~GIG~aia~~la~~G~-~V~~~~r~~~~   41 (248)
T d2o23a1           3 VKGLVAVITGGASGLGLATAERLVGQGA-SAVLLDLPNSG   41 (248)
T ss_dssp             CTTCEEEEETTTSHHHHHHHHHHHHTTC-EEEEEECTTSS
T ss_pred             CCCCEEEEeCCCCHHHHHHHHHHHHCCC-EEEEEeCChHH
Confidence            5689999999999999999999999996 89999998654

>d1q7ba_ c.2.1.2 (A:) beta-keto acyl carrier protein reductase {Escherichia coli [TaxId: 562]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Tyrosine-dependent oxidoreductases
domain: beta-keto acyl carrier protein reductase
species: Escherichia coli [TaxId: 562]

Probab=98.08  E-value=2.2e-06  Score=74.83  Aligned_cols=56  Identities=27%  Similarity=0.261  Sum_probs=43.0

Q ss_pred             ccCCeEEEEcCCChhHHHHHHHHHHcCCceEEEEecCCCCccc-ccccCCCeEEEEcc
Q 017760            9 IEGKTFLVTGGLGHVGSALCLELVRRGAYQVRAFDLRTNSPWS-HLLINHGVHCIQGL   65 (366)
Q Consensus         9 ~~~~~VlITGgtGfiG~~L~~~L~~~g~~~V~~~dr~~~~~~~-~~~~~~~v~~i~gD   65 (366)
                      .++++++||||++-||+++++.|.+.|+ +|++.+|++..... .+....+...+++|
T Consensus         2 l~gK~alITGas~GIG~a~a~~l~~~G~-~Vv~~~r~~~~l~~~~~~~~~~~~~~~~D   58 (243)
T d1q7ba_           2 FEGKIALVTGASRGIGRAIAETLAARGA-KVIGTATSENGAQAISDYLGANGKGLMLN   58 (243)
T ss_dssp             CTTCEEEESSCSSHHHHHHHHHHHHTTC-EEEEEESSHHHHHHHHHHHGGGEEEEECC
T ss_pred             CCCCEEEEeCCCCHHHHHHHHHHHHcCC-EEEEEeCCHHHHHHHHHHhCCCCcEEEEE
Confidence            3578999999999999999999999996 89999987532211 11113467788888

>d1ydea1 c.2.1.2 (A:4-253) Retinal dehydrogenase/reductase 3 {Human (Homo sapiens) [TaxId: 9606]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Tyrosine-dependent oxidoreductases
domain: Retinal dehydrogenase/reductase 3
species: Human (Homo sapiens) [TaxId: 9606]

Probab=98.06  E-value=9.5e-06  Score=70.97  Aligned_cols=56  Identities=25%  Similarity=0.238  Sum_probs=43.9

Q ss_pred             ccCCeEEEEcCCChhHHHHHHHHHHcCCceEEEEecCCCCcccccccCCCeEEEEcc
Q 017760            9 IEGKTFLVTGGLGHVGSALCLELVRRGAYQVRAFDLRTNSPWSHLLINHGVHCIQGL   65 (366)
Q Consensus         9 ~~~~~VlITGgtGfiG~~L~~~L~~~g~~~V~~~dr~~~~~~~~~~~~~~v~~i~gD   65 (366)
                      .++++++||||++-||+++++.|++.|+ +|++.||+...........+++.++++|
T Consensus         4 l~GK~alITGas~GIG~aia~~la~~Ga-~V~i~~r~~~~~~~~~~~~~~~~~~~~D   59 (250)
T d1ydea1           4 YAGKVVVVTGGGRGIGAGIVRAFVNSGA-RVVICDKDESGGRALEQELPGAVFILCD   59 (250)
T ss_dssp             TTTCEEEEETCSSHHHHHHHHHHHHTTC-EEEEEESCHHHHHHHHHHCTTEEEEECC
T ss_pred             CCCCEEEEeCCCCHHHHHHHHHHHHCCC-EEEEEECCHHHHHHHHHhcCCCeEEEcc
Confidence            4679999999999999999999999996 8999998753322111123567888888

>d2ew8a1 c.2.1.2 (A:3-249) (s)-1-phenylethanol dehydrogenase {Azoarcus sp. ebn1 [TaxId: 76114]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Tyrosine-dependent oxidoreductases
domain: (s)-1-phenylethanol dehydrogenase
species: Azoarcus sp. ebn1 [TaxId: 76114]

Probab=98.04  E-value=6.8e-06  Score=71.78  Aligned_cols=57  Identities=19%  Similarity=0.254  Sum_probs=45.1

Q ss_pred             cccCCeEEEEcCCChhHHHHHHHHHHcCCceEEEEecCCCCcccc--cccCCCeEEEEcc
Q 017760            8 GIEGKTFLVTGGLGHVGSALCLELVRRGAYQVRAFDLRTNSPWSH--LLINHGVHCIQGL   65 (366)
Q Consensus         8 ~~~~~~VlITGgtGfiG~~L~~~L~~~g~~~V~~~dr~~~~~~~~--~~~~~~v~~i~gD   65 (366)
                      ..++++++||||++-||+++++.|.+.|+ +|++.||++......  .....++..+++|
T Consensus         2 rL~gKvalVTGas~GIG~aia~~la~~Ga-~V~~~~~~~~~~~~~~~~~~g~~~~~~~~D   60 (247)
T d2ew8a1           2 RLKDKLAVITGGANGIGRAIAERFAVEGA-DIAIADLVPAPEAEAAIRNLGRRVLTVKCD   60 (247)
T ss_dssp             TTTTCEEEEETTTSHHHHHHHHHHHHTTC-EEEEEESSCCHHHHHHHHHTTCCEEEEECC
T ss_pred             CCCCCEEEEeCCCCHHHHHHHHHHHHCCC-EEEEEECCchHHHHHHHHHcCCcEEEEEee
Confidence            35679999999999999999999999996 899999986432211  1124578889999

>d1ae1a_ c.2.1.2 (A:) Tropinone reductase {Jimsonweed (Datura stramonium), I [TaxId: 4076]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Tyrosine-dependent oxidoreductases
domain: Tropinone reductase
species: Jimsonweed (Datura stramonium), I [TaxId: 4076]

Probab=98.02  E-value=7.5e-06  Score=71.97  Aligned_cols=56  Identities=27%  Similarity=0.240  Sum_probs=43.1

Q ss_pred             ccCCeEEEEcCCChhHHHHHHHHHHcCCceEEEEecCCCCccc--ccc--cCCCeEEEEcc
Q 017760            9 IEGKTFLVTGGLGHVGSALCLELVRRGAYQVRAFDLRTNSPWS--HLL--INHGVHCIQGL   65 (366)
Q Consensus         9 ~~~~~VlITGgtGfiG~~L~~~L~~~g~~~V~~~dr~~~~~~~--~~~--~~~~v~~i~gD   65 (366)
                      .++++++||||++-||+++++.|++.|+ +|++.+|++.....  +.+  ....+.++.+|
T Consensus         4 L~gK~alITGas~GIG~aia~~la~~G~-~V~i~~r~~~~l~~~~~~~~~~~~~~~~~~~D   63 (258)
T d1ae1a_           4 LKGTTALVTGGSKGIGYAIVEELAGLGA-RVYTCSRNEKELDECLEIWREKGLNVEGSVCD   63 (258)
T ss_dssp             CTTCEEEEESCSSHHHHHHHHHHHHTTC-EEEEEESCHHHHHHHHHHHHHTTCCEEEEECC
T ss_pred             CCCCEEEEeCCCCHHHHHHHHHHHHCCC-EEEEEECCHHHHHHHHHHHHhcCCCceEEEee
Confidence            4679999999999999999999999996 89999998532111  111  23556778888

>d1cyda_ c.2.1.2 (A:) Carbonyl reductase {Mouse (Mus musculus) [TaxId: 10090]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Tyrosine-dependent oxidoreductases
domain: Carbonyl reductase
species: Mouse (Mus musculus) [TaxId: 10090]

Probab=98.01  E-value=2.3e-06  Score=74.60  Aligned_cols=56  Identities=23%  Similarity=0.128  Sum_probs=43.2

Q ss_pred             ccCCeEEEEcCCChhHHHHHHHHHHcCCceEEEEecCCCCcccccccCCCeEEEEcc
Q 017760            9 IEGKTFLVTGGLGHVGSALCLELVRRGAYQVRAFDLRTNSPWSHLLINHGVHCIQGL   65 (366)
Q Consensus         9 ~~~~~VlITGgtGfiG~~L~~~L~~~g~~~V~~~dr~~~~~~~~~~~~~~v~~i~gD   65 (366)
                      .++++++||||++-||+++++.|.+.|+ +|++.+|++..........+++..+.+|
T Consensus         3 l~GK~alITGas~GIG~aia~~la~~Ga-~V~~~~r~~~~l~~~~~~~~~~~~~~~D   58 (242)
T d1cyda_           3 FSGLRALVTGAGKGIGRDTVKALHASGA-KVVAVTRTNSDLVSLAKECPGIEPVCVD   58 (242)
T ss_dssp             CTTCEEEEESTTSHHHHHHHHHHHHTTC-EEEEEESCHHHHHHHHHHSTTCEEEECC
T ss_pred             CCCCEEEEeCCCcHHHHHHHHHHHHCCC-EEEEEECCHHHHHHHHHhcCCCeEEEEe
Confidence            4679999999999999999999999995 8999998753321111123567788888

>d1w6ua_ c.2.1.2 (A:) 2,4-dienoyl-CoA reductase, mitochondrial (DECR) {Human (Homo sapiens), [TaxId: 9606]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Tyrosine-dependent oxidoreductases
domain: 2,4-dienoyl-CoA reductase, mitochondrial (DECR)
species: Human (Homo sapiens), [TaxId: 9606]

Probab=98.00  E-value=7.9e-06  Score=73.03  Aligned_cols=56  Identities=25%  Similarity=0.258  Sum_probs=43.3

Q ss_pred             ccCCeEEEEcCCChhHHHHHHHHHHcCCceEEEEecCCCCccc--cc---ccCCCeEEEEcc
Q 017760            9 IEGKTFLVTGGLGHVGSALCLELVRRGAYQVRAFDLRTNSPWS--HL---LINHGVHCIQGL   65 (366)
Q Consensus         9 ~~~~~VlITGgtGfiG~~L~~~L~~~g~~~V~~~dr~~~~~~~--~~---~~~~~v~~i~gD   65 (366)
                      .++++++||||+|-||++++++|.+.|+ +|++.+|+......  .+   ..+..+..+++|
T Consensus        23 l~gK~alITGas~GIG~aiA~~la~~Ga-~Vii~~r~~~~l~~~~~~l~~~~g~~~~~~~~D   83 (294)
T d1w6ua_          23 FQGKVAFITGGGTGLGKGMTTLLSSLGA-QCVIASRKMDVLKATAEQISSQTGNKVHAIQCD   83 (294)
T ss_dssp             TTTCEEEEETTTSHHHHHHHHHHHHTTC-EEEEEESCHHHHHHHHHHHHHHHSSCEEEEECC
T ss_pred             CCCCEEEEeCCCCHHHHHHHHHHHHcCC-EEEEEECCHHHHHHHHHHHHHhcCCceEEEEec
Confidence            3468999999999999999999999995 89999998643211  11   123567788888

>d2gdza1 c.2.1.2 (A:3-256) 15-hydroxyprostaglandin dehydrogenase, PGDH {Human (Homo sapiens) [TaxId: 9606]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Tyrosine-dependent oxidoreductases
domain: 15-hydroxyprostaglandin dehydrogenase, PGDH
species: Human (Homo sapiens) [TaxId: 9606]

Probab=97.97  E-value=3e-06  Score=74.43  Aligned_cols=55  Identities=27%  Similarity=0.286  Sum_probs=43.1

Q ss_pred             cCCeEEEEcCCChhHHHHHHHHHHcCCceEEEEecCCCCccc--c----cccCCCeEEEEcc
Q 017760           10 EGKTFLVTGGLGHVGSALCLELVRRGAYQVRAFDLRTNSPWS--H----LLINHGVHCIQGL   65 (366)
Q Consensus        10 ~~~~VlITGgtGfiG~~L~~~L~~~g~~~V~~~dr~~~~~~~--~----~~~~~~v~~i~gD   65 (366)
                      ++++++||||++-||.++++.|.+.|+ +|++.+|+......  .    .....++.++++|
T Consensus         2 ~GKvalITGas~GIG~aia~~la~~Ga-~V~i~~r~~~~~~~~~~~l~~~~~~~~~~~~~~D   62 (254)
T d2gdza1           2 NGKVALVTGAAQGIGRAFAEALLLKGA-KVALVDWNLEAGVQCKAALHEQFEPQKTLFIQCD   62 (254)
T ss_dssp             TTCEEEEETTTSHHHHHHHHHHHHTTC-EEEEEESCHHHHHHHHHHHTTTSCGGGEEEEECC
T ss_pred             CCCEEEEeCCCCHHHHHHHHHHHHCCC-EEEEEECCHHHHHHHHHHHHHhcCCCcEEEEEee
Confidence            578999999999999999999999996 89999998543211  1    1123467888999

>d2bgka1 c.2.1.2 (A:11-278) Rhizome secoisolariciresinol dehydrogenase {Mayapple (Podophyllum peltatum) [TaxId: 35933]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Tyrosine-dependent oxidoreductases
domain: Rhizome secoisolariciresinol dehydrogenase
species: Mayapple (Podophyllum peltatum) [TaxId: 35933]

Probab=97.97  E-value=1.2e-05  Score=71.08  Aligned_cols=57  Identities=21%  Similarity=0.309  Sum_probs=44.0

Q ss_pred             cccCCeEEEEcCCChhHHHHHHHHHHcCCceEEEEecCCCCccc--ccc-cCCCeEEEEcc
Q 017760            8 GIEGKTFLVTGGLGHVGSALCLELVRRGAYQVRAFDLRTNSPWS--HLL-INHGVHCIQGL   65 (366)
Q Consensus         8 ~~~~~~VlITGgtGfiG~~L~~~L~~~g~~~V~~~dr~~~~~~~--~~~-~~~~v~~i~gD   65 (366)
                      ..++++++||||++-||.++++.|++.|+ +|++.||+......  ..+ ....+.++.+|
T Consensus         3 rL~gKvalITGas~GIG~aia~~la~~Ga-~V~i~~r~~~~~~~~~~~l~~~~~~~~~~~D   62 (268)
T d2bgka1           3 RLQDKVAIITGGAGGIGETTAKLFVRYGA-KVVIADIADDHGQKVCNNIGSPDVISFVHCD   62 (268)
T ss_dssp             TTTTCEEEEESTTSHHHHHHHHHHHHTTC-EEEEEESCHHHHHHHHHHHCCTTTEEEEECC
T ss_pred             CCCCCEEEEeCCCcHHHHHHHHHHHHCCC-EEEEEECCHHHHHHHHHHhcCCCceEEEEcc
Confidence            46789999999999999999999999996 89999987532211  111 13457788888

>d1nffa_ c.2.1.2 (A:) Putative oxidoreductase Rv2002 {Mycobacterium tuberculosis [TaxId: 1773]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Tyrosine-dependent oxidoreductases
domain: Putative oxidoreductase Rv2002
species: Mycobacterium tuberculosis [TaxId: 1773]

Probab=97.96  E-value=6.2e-06  Score=71.92  Aligned_cols=56  Identities=21%  Similarity=0.255  Sum_probs=43.5

Q ss_pred             ccCCeEEEEcCCChhHHHHHHHHHHcCCceEEEEecCCCCccc-ccccCCCeEEEEcc
Q 017760            9 IEGKTFLVTGGLGHVGSALCLELVRRGAYQVRAFDLRTNSPWS-HLLINHGVHCIQGL   65 (366)
Q Consensus         9 ~~~~~VlITGgtGfiG~~L~~~L~~~g~~~V~~~dr~~~~~~~-~~~~~~~v~~i~gD   65 (366)
                      .++++++||||++-||+++++.|++.|+ +|++.+|++..... .+.....+.++++|
T Consensus         4 L~gK~alITGas~GIG~aia~~la~~G~-~V~~~~r~~~~~~~~~~~~~~~~~~~~~D   60 (244)
T d1nffa_           4 LTGKVALVSGGARGMGASHVRAMVAEGA-KVVFGDILDEEGKAMAAELADAARYVHLD   60 (244)
T ss_dssp             TTTCEEEEETTTSHHHHHHHHHHHHTTC-EEEEEESCHHHHHHHHHHTGGGEEEEECC
T ss_pred             cCCCEEEEeCCCCHHHHHHHHHHHHCCC-EEEEEECCHHHHHHHHHHhhCcceEEEee
Confidence            4678999999999999999999999996 89999997633211 11123567888888

>d1k2wa_ c.2.1.2 (A:) Sorbitol dehydrogenase {Rhodobacter sphaeroides [TaxId: 1063]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Tyrosine-dependent oxidoreductases
domain: Sorbitol dehydrogenase
species: Rhodobacter sphaeroides [TaxId: 1063]

Probab=97.94  E-value=2.7e-06  Score=74.80  Aligned_cols=56  Identities=29%  Similarity=0.363  Sum_probs=43.4

Q ss_pred             ccCCeEEEEcCCChhHHHHHHHHHHcCCceEEEEecCCCCccc-ccccCCCeEEEEcc
Q 017760            9 IEGKTFLVTGGLGHVGSALCLELVRRGAYQVRAFDLRTNSPWS-HLLINHGVHCIQGL   65 (366)
Q Consensus         9 ~~~~~VlITGgtGfiG~~L~~~L~~~g~~~V~~~dr~~~~~~~-~~~~~~~v~~i~gD   65 (366)
                      .++++++||||++-||+++++.|++.|+ +|++.||+...... ......++..+++|
T Consensus         3 L~gK~alVTGas~GIG~aia~~la~~Ga-~V~~~~r~~~~l~~~~~~~~~~~~~~~~D   59 (256)
T d1k2wa_           3 LDGKTALITGSARGIGRAFAEAYVREGA-RVAIADINLEAARATAAEIGPAACAIALD   59 (256)
T ss_dssp             TTTEEEEEETCSSHHHHHHHHHHHHTTE-EEEEEESCHHHHHHHHHHHCTTEEEEECC
T ss_pred             CCCCEEEEeCCCCHHHHHHHHHHHHCCC-EEEEEECCHHHHHHHHHHhCCceEEEEee
Confidence            4678999999999999999999999995 89999987532211 11114567888888

>d1x1ta1 c.2.1.2 (A:1-260) D(-)-3-hydroxybutyrate dehydrogenase {Pseudomonas fragi [TaxId: 296]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Tyrosine-dependent oxidoreductases
domain: D(-)-3-hydroxybutyrate dehydrogenase
species: Pseudomonas fragi [TaxId: 296]

Probab=97.94  E-value=6.1e-06  Score=72.63  Aligned_cols=56  Identities=18%  Similarity=0.179  Sum_probs=43.7

Q ss_pred             ccCCeEEEEcCCChhHHHHHHHHHHcCCceEEEEecCCCCccc---c---cccCCCeEEEEcc
Q 017760            9 IEGKTFLVTGGLGHVGSALCLELVRRGAYQVRAFDLRTNSPWS---H---LLINHGVHCIQGL   65 (366)
Q Consensus         9 ~~~~~VlITGgtGfiG~~L~~~L~~~g~~~V~~~dr~~~~~~~---~---~~~~~~v~~i~gD   65 (366)
                      +++++++||||++-||.++++.|++.|+ +|++.+|++.....   .   .....++.++++|
T Consensus         2 L~gK~alITGas~GIG~aiA~~la~~Ga-~V~~~~r~~~~~~~~~~~~~~~~~g~~~~~~~~D   63 (260)
T d1x1ta1           2 LKGKVAVVTGSTSGIGLGIATALAAQGA-DIVLNGFGDAAEIEKVRAGLAAQHGVKVLYDGAD   63 (260)
T ss_dssp             CTTCEEEETTCSSHHHHHHHHHHHHTTC-EEEEECCSCHHHHHHHHHHHHHHHTSCEEEECCC
T ss_pred             CCcCEEEEeCCCCHHHHHHHHHHHHCCC-EEEEEeCCcHHHHHHHHHHHHHhcCCcEEEEECC
Confidence            5678999999999999999999999996 89999998532211   1   1123567888899

>d2d1ya1 c.2.1.2 (A:2-249) Hypothetical protein TTHA0369 {Thermus thermophilus [TaxId: 274]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Tyrosine-dependent oxidoreductases
domain: Hypothetical protein TTHA0369
species: Thermus thermophilus [TaxId: 274]

Probab=97.93  E-value=4.8e-06  Score=72.83  Aligned_cols=54  Identities=33%  Similarity=0.411  Sum_probs=42.8

Q ss_pred             ccCCeEEEEcCCChhHHHHHHHHHHcCCceEEEEecCCCCcccccccCCCeEEEEcc
Q 017760            9 IEGKTFLVTGGLGHVGSALCLELVRRGAYQVRAFDLRTNSPWSHLLINHGVHCIQGL   65 (366)
Q Consensus         9 ~~~~~VlITGgtGfiG~~L~~~L~~~g~~~V~~~dr~~~~~~~~~~~~~~v~~i~gD   65 (366)
                      .++++++||||++-||.++++.|.+.|+ +|.+.+|++...  +.....+..++++|
T Consensus         3 l~GK~alITGas~GIG~aia~~la~~G~-~V~~~~~~~~~~--~~~~~~~~~~~~~D   56 (248)
T d2d1ya1           3 FAGKGVLVTGGARGIGRAIAQAFAREGA-LVALCDLRPEGK--EVAEAIGGAFFQVD   56 (248)
T ss_dssp             TTTCEEEEETTTSHHHHHHHHHHHHTTC-EEEEEESSTTHH--HHHHHHTCEEEECC
T ss_pred             cCCCEEEEeCCCCHHHHHHHHHHHHCCC-EEEEEECCHHHH--HHHHHcCCeEEEEe
Confidence            4679999999999999999999999995 899999986432  11222355778888

>d2ag5a1 c.2.1.2 (A:1-245) Dehydrogenase/reductase SDR family member 6, DHRS6 {Human (Homo sapiens) [TaxId: 9606]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Tyrosine-dependent oxidoreductases
domain: Dehydrogenase/reductase SDR family member 6, DHRS6
species: Human (Homo sapiens) [TaxId: 9606]

Probab=97.91  E-value=1.4e-05  Score=69.50  Aligned_cols=55  Identities=25%  Similarity=0.329  Sum_probs=42.8

Q ss_pred             ccCCeEEEEcCCChhHHHHHHHHHHcCCceEEEEecCCCCcccccccCCCeEEEEcc
Q 017760            9 IEGKTFLVTGGLGHVGSALCLELVRRGAYQVRAFDLRTNSPWSHLLINHGVHCIQGL   65 (366)
Q Consensus         9 ~~~~~VlITGgtGfiG~~L~~~L~~~g~~~V~~~dr~~~~~~~~~~~~~~v~~i~gD   65 (366)
                      .++++++||||++-||+++++.|++.|+ +|++.+|++.... +.....+++....|
T Consensus         4 l~gK~alITGas~GIG~aia~~la~~G~-~Vi~~~r~~~~l~-~~~~~~~~~~~~~d   58 (245)
T d2ag5a1           4 LDGKVIILTAAAQGIGQAAALAFAREGA-KVIATDINESKLQ-ELEKYPGIQTRVLD   58 (245)
T ss_dssp             TTTCEEEESSTTSHHHHHHHHHHHHTTC-EEEEEESCHHHHG-GGGGSTTEEEEECC
T ss_pred             CCCCEEEEeCCCCHHHHHHHHHHHHcCC-EEEEEeCCHHHHH-HHHhccCCceeeee
Confidence            5679999999999999999999999995 8999999853221 12223566666666

>d1vl8a_ c.2.1.2 (A:) Gluconate 5-dehydrogenase {Thermotoga maritima [TaxId: 2336]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Tyrosine-dependent oxidoreductases
domain: Gluconate 5-dehydrogenase
species: Thermotoga maritima [TaxId: 2336]

Probab=97.91  E-value=8.1e-06  Score=71.45  Aligned_cols=56  Identities=18%  Similarity=0.185  Sum_probs=43.7

Q ss_pred             ccCCeEEEEcCCChhHHHHHHHHHHcCCceEEEEecCCCCccc--c---cccCCCeEEEEcc
Q 017760            9 IEGKTFLVTGGLGHVGSALCLELVRRGAYQVRAFDLRTNSPWS--H---LLINHGVHCIQGL   65 (366)
Q Consensus         9 ~~~~~VlITGgtGfiG~~L~~~L~~~g~~~V~~~dr~~~~~~~--~---~~~~~~v~~i~gD   65 (366)
                      .++++++||||++-||+++++.|++.|+ +|.+.+|+......  .   .....++..+++|
T Consensus         3 l~gK~~lITGas~GIG~aia~~la~~Ga-~V~i~~r~~~~~~~~~~~l~~~~g~~~~~~~~D   63 (251)
T d1vl8a_           3 LRGRVALVTGGSRGLGFGIAQGLAEAGC-SVVVASRNLEEASEAAQKLTEKYGVETMAFRCD   63 (251)
T ss_dssp             CTTCEEEEETTTSHHHHHHHHHHHHTTC-EEEEEESCHHHHHHHHHHHHHHHCCCEEEEECC
T ss_pred             CCCCEEEEeCCCCHHHHHHHHHHHHCCC-EEEEEECCHHHHHHHHHHHHHHhCCcEEEEEcc
Confidence            4678999999999999999999999996 89999987543211  1   1113567888898

>d1g0oa_ c.2.1.2 (A:) 1,3,8-trihydroxynaphtalene reductase (THNR, naphtol reductase) {Rice blast fungus (Magnaporthe grisea) [TaxId: 148305]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Tyrosine-dependent oxidoreductases
domain: 1,3,8-trihydroxynaphtalene reductase (THNR, naphtol reductase)
species: Rice blast fungus (Magnaporthe grisea) [TaxId: 148305]

Probab=97.91  E-value=2.6e-05  Score=68.83  Aligned_cols=58  Identities=26%  Similarity=0.354  Sum_probs=44.9

Q ss_pred             ccccCCeEEEEcCCChhHHHHHHHHHHcCCceEEEEecCCCCccc---c--cccCCCeEEEEcc
Q 017760            7 EGIEGKTFLVTGGLGHVGSALCLELVRRGAYQVRAFDLRTNSPWS---H--LLINHGVHCIQGL   65 (366)
Q Consensus         7 ~~~~~~~VlITGgtGfiG~~L~~~L~~~g~~~V~~~dr~~~~~~~---~--~~~~~~v~~i~gD   65 (366)
                      ...++++++||||++-||+++++.|++.|+ +|++.+++......   .  .....++.++++|
T Consensus        14 ~sL~gK~~lITGas~GIG~aia~~la~~Ga-~Vvi~~~~~~~~~~~~~~~~~~~g~~~~~~~~D   76 (272)
T d1g0oa_          14 ASLEGKVALVTGAGRGIGREMAMELGRRGC-KVIVNYANSTESAEEVVAAIKKNGSDAACVKAN   76 (272)
T ss_dssp             GCCTTCEEEETTTTSHHHHHHHHHHHHTTC-EEEEEESSCHHHHHHHHHHHHHTTCCEEEEECC
T ss_pred             cCCCCCEEEEeCCCCHHHHHHHHHHHHcCC-EEEEEeCCchHHHHHHHHHHHhhCCceeeEeCC
Confidence            346789999999999999999999999995 89999987543211   1  1123568888888

>d1hdca_ c.2.1.2 (A:) 3-alpha,20-beta-hydroxysteroid dehydrogenase {Streptomyces hydrogenans [TaxId: 1905]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Tyrosine-dependent oxidoreductases
domain: 3-alpha,20-beta-hydroxysteroid dehydrogenase
species: Streptomyces hydrogenans [TaxId: 1905]

Probab=97.88  E-value=1.9e-05  Score=69.17  Aligned_cols=56  Identities=21%  Similarity=0.251  Sum_probs=43.7

Q ss_pred             ccCCeEEEEcCCChhHHHHHHHHHHcCCceEEEEecCCCCccc-ccccCCCeEEEEcc
Q 017760            9 IEGKTFLVTGGLGHVGSALCLELVRRGAYQVRAFDLRTNSPWS-HLLINHGVHCIQGL   65 (366)
Q Consensus         9 ~~~~~VlITGgtGfiG~~L~~~L~~~g~~~V~~~dr~~~~~~~-~~~~~~~v~~i~gD   65 (366)
                      .++++++||||++-||.++++.|++.|+ +|++.||+...... .+.....+.++++|
T Consensus         3 L~gK~alVTGas~GIG~aia~~la~~Ga-~V~~~~r~~~~~~~~~~~~~~~~~~~~~D   59 (254)
T d1hdca_           3 LSGKTVIITGGARGLGAEAARQAVAAGA-RVVLADVLDEEGAATARELGDAARYQHLD   59 (254)
T ss_dssp             CCCSEEEEETTTSHHHHHHHHHHHHTTC-EEEEEESCHHHHHHHHHTTGGGEEEEECC
T ss_pred             CCCCEEEEeCcCCHHHHHHHHHHHHCCC-EEEEEECCHHHHHHHHHHhCCceEEEEcc
Confidence            4679999999999999999999999996 89999987532211 11123567888898

>d1ja9a_ c.2.1.2 (A:) 1,3,6,8-tetrahydroxynaphthalene reductase {Rice blast fungus (Magnaporthe grisea) [TaxId: 148305]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Tyrosine-dependent oxidoreductases
domain: 1,3,6,8-tetrahydroxynaphthalene reductase
species: Rice blast fungus (Magnaporthe grisea) [TaxId: 148305]

Probab=97.88  E-value=1.9e-05  Score=69.19  Aligned_cols=56  Identities=29%  Similarity=0.280  Sum_probs=42.5

Q ss_pred             ccCCeEEEEcCCChhHHHHHHHHHHcCCceEEEEecCCCCccc---ccc--cCCCeEEEEcc
Q 017760            9 IEGKTFLVTGGLGHVGSALCLELVRRGAYQVRAFDLRTNSPWS---HLL--INHGVHCIQGL   65 (366)
Q Consensus         9 ~~~~~VlITGgtGfiG~~L~~~L~~~g~~~V~~~dr~~~~~~~---~~~--~~~~v~~i~gD   65 (366)
                      ..+++++||||++-||.++++.|++.|+ +|++.+++......   ..+  ...++..+.+|
T Consensus         4 L~GK~alITGas~GIG~aia~~la~~G~-~Vvi~~~~~~~~~~~~~~~~~~~g~~~~~~~~D   64 (259)
T d1ja9a_           4 LAGKVALTTGAGRGIGRGIAIELGRRGA-SVVVNYGSSSKAAEEVVAELKKLGAQGVAIQAD   64 (259)
T ss_dssp             TTTCEEEETTTTSHHHHHHHHHHHHTTC-EEEEEESSCHHHHHHHHHHHHHTTCCEEEEECC
T ss_pred             CCCCEEEEeCCCCHHHHHHHHHHHHcCC-EEEEEcCCChHHHHHHHHHHHHcCCCceEecCC
Confidence            4679999999999999999999999995 89887766533211   111  23467888998

>d1qsga_ c.2.1.2 (A:) Enoyl-ACP reductase {Escherichia coli [TaxId: 562]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Tyrosine-dependent oxidoreductases
domain: Enoyl-ACP reductase
species: Escherichia coli [TaxId: 562]

Probab=97.87  E-value=3e-05  Score=67.58  Aligned_cols=38  Identities=24%  Similarity=0.350  Sum_probs=33.8

Q ss_pred             ccCCeEEEEcCCC--hhHHHHHHHHHHcCCceEEEEecCCC
Q 017760            9 IEGKTFLVTGGLG--HVGSALCLELVRRGAYQVRAFDLRTN   47 (366)
Q Consensus         9 ~~~~~VlITGgtG--fiG~~L~~~L~~~g~~~V~~~dr~~~   47 (366)
                      .++++++||||+|  -+|+++++.|++.|+ +|++.+|++.
T Consensus         3 L~gK~~lITGass~~GIG~aiA~~l~~~G~-~V~i~~~~~~   42 (258)
T d1qsga_           3 LSGKRILVTGVASKLSIAYGIAQAMHREGA-ELAFTYQNDK   42 (258)
T ss_dssp             TTTCEEEECCCCSTTSHHHHHHHHHHHTTC-EEEEEESSTT
T ss_pred             CCCCEEEEECCCCchhHHHHHHHHHHHcCC-EEEEEeCCHH
Confidence            4679999999999  688999999999995 8999999854

>d1ulua_ c.2.1.2 (A:) Enoyl-ACP reductase {Thermus thermophilus [TaxId: 274]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Tyrosine-dependent oxidoreductases
domain: Enoyl-ACP reductase
species: Thermus thermophilus [TaxId: 274]

Probab=97.84  E-value=2.4e-05  Score=68.34  Aligned_cols=56  Identities=21%  Similarity=0.141  Sum_probs=41.0

Q ss_pred             ccCCeEEEEcCCC--hhHHHHHHHHHHcCCceEEEEecCCCCccc-c--cccCCCeEEEEcc
Q 017760            9 IEGKTFLVTGGLG--HVGSALCLELVRRGAYQVRAFDLRTNSPWS-H--LLINHGVHCIQGL   65 (366)
Q Consensus         9 ~~~~~VlITGgtG--fiG~~L~~~L~~~g~~~V~~~dr~~~~~~~-~--~~~~~~v~~i~gD   65 (366)
                      .++++++||||+|  -||++++++|++.|+ +|++.++++..... .  .........+++|
T Consensus         6 L~gK~alITGas~~~GIG~aiA~~la~~Ga-~V~i~~~~~~~~~~~~~~~~~~~~~~~~~~D   66 (256)
T d1ulua_           6 LSGKKALVMGVTNQRSLGFAIAAKLKEAGA-EVALSYQAERLRPEAEKLAEALGGALLFRAD   66 (256)
T ss_dssp             CTTCEEEEESCCCSSSHHHHHHHHHHHTTC-EEEEEESSGGGHHHHHHHHHHTTCCEEEECC
T ss_pred             CCCCEEEEECCCCCchHHHHHHHHHHHCCC-EEEEEeCcHHHHHHHHHhhhccCcccccccc
Confidence            5679999999998  599999999999996 89988887432211 0  1112456677888

>d1zk4a1 c.2.1.2 (A:1-251) R-specific alcohol dehydrogenase {Lactobacillus brevis [TaxId: 1580]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Tyrosine-dependent oxidoreductases
domain: R-specific alcohol dehydrogenase
species: Lactobacillus brevis [TaxId: 1580]

Probab=97.83  E-value=8.6e-06  Score=71.28  Aligned_cols=56  Identities=21%  Similarity=0.308  Sum_probs=44.2

Q ss_pred             ccCCeEEEEcCCChhHHHHHHHHHHcCCceEEEEecCCCCccc--ccc-cCCCeEEEEcc
Q 017760            9 IEGKTFLVTGGLGHVGSALCLELVRRGAYQVRAFDLRTNSPWS--HLL-INHGVHCIQGL   65 (366)
Q Consensus         9 ~~~~~VlITGgtGfiG~~L~~~L~~~g~~~V~~~dr~~~~~~~--~~~-~~~~v~~i~gD   65 (366)
                      .++++++||||++-||+++++.|.+.|+ +|++.+|+......  ..+ .+.++.++++|
T Consensus         4 L~gK~alVTGas~GIG~aia~~la~~Ga-~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~D   62 (251)
T d1zk4a1           4 LDGKVAIITGGTLGIGLAIATKFVEEGA-KVMITGRHSDVGEKAAKSVGTPDQIQFFQHD   62 (251)
T ss_dssp             TTTCEEEETTTTSHHHHHHHHHHHHTTC-EEEEEESCHHHHHHHHHHHCCTTTEEEEECC
T ss_pred             CCCCEEEEeCCCCHHHHHHHHHHHHCCC-EEEEEECCHHHHHHHHHHhCCCCcEEEEEcc
Confidence            5789999999999999999999999996 89999987532211  111 23578899999

>d1zema1 c.2.1.2 (A:3-262) Xylitol dehydrogenase {Gluconobacter oxydans [TaxId: 442]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Tyrosine-dependent oxidoreductases
domain: Xylitol dehydrogenase
species: Gluconobacter oxydans [TaxId: 442]

Probab=97.83  E-value=2.7e-05  Score=68.32  Aligned_cols=56  Identities=23%  Similarity=0.300  Sum_probs=43.4

Q ss_pred             ccCCeEEEEcCCChhHHHHHHHHHHcCCceEEEEecCCCCccc--ccc--cCCCeEEEEcc
Q 017760            9 IEGKTFLVTGGLGHVGSALCLELVRRGAYQVRAFDLRTNSPWS--HLL--INHGVHCIQGL   65 (366)
Q Consensus         9 ~~~~~VlITGgtGfiG~~L~~~L~~~g~~~V~~~dr~~~~~~~--~~~--~~~~v~~i~gD   65 (366)
                      .++++++||||++-||.++++.|.+.|+ +|++.||++.....  ..+  ...++..+.+|
T Consensus         3 L~gK~alITGas~GIG~aia~~la~~Ga-~V~~~~r~~~~l~~~~~~~~~~g~~~~~~~~D   62 (260)
T d1zema1           3 FNGKVCLVTGAGGNIGLATALRLAEEGT-AIALLDMNREALEKAEASVREKGVEARSYVCD   62 (260)
T ss_dssp             TTTCEEEEETTTSHHHHHHHHHHHHTTC-EEEEEESCHHHHHHHHHHHHTTTSCEEEEECC
T ss_pred             CCCCEEEEeCCCCHHHHHHHHHHHHCCC-EEEEEECCHHHHHHHHHHHHhcCCcEEEEEcc
Confidence            4679999999999999999999999996 89999987532211  111  13467888888

>d1geea_ c.2.1.2 (A:) Glucose dehydrogenase {Bacillus megaterium [TaxId: 1404]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Tyrosine-dependent oxidoreductases
domain: Glucose dehydrogenase
species: Bacillus megaterium [TaxId: 1404]

Probab=97.82  E-value=1.5e-05  Score=70.20  Aligned_cols=56  Identities=16%  Similarity=0.276  Sum_probs=43.5

Q ss_pred             ccCCeEEEEcCCChhHHHHHHHHHHcCCceEEEEecCCCCccc---ccc--cCCCeEEEEcc
Q 017760            9 IEGKTFLVTGGLGHVGSALCLELVRRGAYQVRAFDLRTNSPWS---HLL--INHGVHCIQGL   65 (366)
Q Consensus         9 ~~~~~VlITGgtGfiG~~L~~~L~~~g~~~V~~~dr~~~~~~~---~~~--~~~~v~~i~gD   65 (366)
                      .++++++||||++-||.++++.|.+.|+ +|++.+|+......   +.+  ...++..+++|
T Consensus         5 L~gK~alITGas~GIG~aia~~la~~G~-~Vv~~~r~~~~~~~~~~~~~~~~g~~~~~~~~D   65 (261)
T d1geea_           5 LEGKVVVITGSSTGLGKSMAIRFATEKA-KVVVNYRSKEDEANSVLEEIKKVGGEAIAVKGD   65 (261)
T ss_dssp             GTTCEEEETTCSSHHHHHHHHHHHHTTC-EEEEEESSCHHHHHHHHHHHHHTTCEEEEEECC
T ss_pred             CCCCEEEEeCCCcHHHHHHHHHHHHCCC-EEEEEeCCcHHHHHHHHHHHHhcCCcEEEEEcc
Confidence            5679999999999999999999999995 89999998532110   111  23467888899

>d1yxma1 c.2.1.2 (A:7-303) Peroxisomal trans 2-enoyl CoA reductase {Human (Homo sapiens) [TaxId: 9606]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Tyrosine-dependent oxidoreductases
domain: Peroxisomal trans 2-enoyl CoA reductase
species: Human (Homo sapiens) [TaxId: 9606]

Probab=97.77  E-value=1.9e-05  Score=70.83  Aligned_cols=57  Identities=26%  Similarity=0.242  Sum_probs=44.1

Q ss_pred             cccCCeEEEEcCCChhHHHHHHHHHHcCCceEEEEecCCCCccc--cc-------ccCCCeEEEEcc
Q 017760            8 GIEGKTFLVTGGLGHVGSALCLELVRRGAYQVRAFDLRTNSPWS--HL-------LINHGVHCIQGL   65 (366)
Q Consensus         8 ~~~~~~VlITGgtGfiG~~L~~~L~~~g~~~V~~~dr~~~~~~~--~~-------~~~~~v~~i~gD   65 (366)
                      ..++++++||||++-||.++++.|++.|+ +|++.+|+......  .+       ....++..+++|
T Consensus         9 ~L~gKvalITGas~GIG~aia~~la~~Ga-~Vvi~~r~~~~l~~~~~el~~~~~~~~~~~~~~~~~D   74 (297)
T d1yxma1           9 LLQGQVAIVTGGATGIGKAIVKELLELGS-NVVIASRKLERLKSAADELQANLPPTKQARVIPIQCN   74 (297)
T ss_dssp             TTTTCEEEEETTTSHHHHHHHHHHHHTTC-EEEEEESCHHHHHHHHHHHHHTSCTTCCCCEEEEECC
T ss_pred             CCCCCEEEEeCCCCHHHHHHHHHHHHCCC-EEEEEECCHHHHHHHHHHHHhhhccccCceEEEEecc
Confidence            35789999999999999999999999996 89999997532111  11       123467888998

>d2pd4a1 c.2.1.2 (A:2-275) Enoyl-ACP reductase {Helicobacter pylori [TaxId: 210]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Tyrosine-dependent oxidoreductases
domain: Enoyl-ACP reductase
species: Helicobacter pylori [TaxId: 210]

Probab=97.77  E-value=5.1e-05  Score=66.70  Aligned_cols=38  Identities=18%  Similarity=0.270  Sum_probs=34.1

Q ss_pred             ccCCeEEEEcCCC--hhHHHHHHHHHHcCCceEEEEecCCC
Q 017760            9 IEGKTFLVTGGLG--HVGSALCLELVRRGAYQVRAFDLRTN   47 (366)
Q Consensus         9 ~~~~~VlITGgtG--fiG~~L~~~L~~~g~~~V~~~dr~~~   47 (366)
                      .+++++|||||+|  -||.++++.|++.|+ +|++.+|++.
T Consensus         3 L~gK~alITGaag~~GIG~AiA~~la~~Ga-~V~i~~r~~~   42 (274)
T d2pd4a1           3 LKGKKGLIVGVANNKSIAYGIAQSCFNQGA-TLAFTYLNES   42 (274)
T ss_dssp             TTTCEEEEECCCSTTSHHHHHHHHHHTTTC-EEEEEESSTT
T ss_pred             CCCCEEEEECCCCCcHHHHHHHHHHHHCCC-EEEEEeCCHH
Confidence            5689999999988  699999999999996 8999999854

>d2rhca1 c.2.1.2 (A:5-261) beta-keto acyl carrier protein reductase {Streptomyces coelicolor [TaxId: 1902]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Tyrosine-dependent oxidoreductases
domain: beta-keto acyl carrier protein reductase
species: Streptomyces coelicolor [TaxId: 1902]

Probab=97.76  E-value=5.2e-05  Score=66.30  Aligned_cols=54  Identities=17%  Similarity=0.109  Sum_probs=41.3

Q ss_pred             CCeEEEEcCCChhHHHHHHHHHHcCCceEEEEecCCCCccc--ccc--cCCCeEEEEcc
Q 017760           11 GKTFLVTGGLGHVGSALCLELVRRGAYQVRAFDLRTNSPWS--HLL--INHGVHCIQGL   65 (366)
Q Consensus        11 ~~~VlITGgtGfiG~~L~~~L~~~g~~~V~~~dr~~~~~~~--~~~--~~~~v~~i~gD   65 (366)
                      +|.++||||++-||.++++.|.+.|+ +|++.+|++.....  ..+  ...++.++++|
T Consensus         2 gKValITGas~GIG~aia~~la~~Ga-~V~i~~r~~~~l~~~~~~l~~~g~~~~~~~~D   59 (257)
T d2rhca1           2 SEVALVTGATSGIGLEIARRLGKEGL-RVFVCARGEEGLRTTLKELREAGVEADGRTCD   59 (257)
T ss_dssp             CCEEEEESCSSHHHHHHHHHHHHTTC-EEEEEESCHHHHHHHHHHHHHTTCCEEEEECC
T ss_pred             CCEEEEeCCCCHHHHHHHHHHHHCCC-EEEEEECCHHHHHHHHHHHHhcCCcEEEEEee
Confidence            46779999999999999999999996 89999987532111  111  13467888999

>d1xq1a_ c.2.1.2 (A:) Tropinone reductase {Thale cress (Arabidopsis thaliana) [TaxId: 3702]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Tyrosine-dependent oxidoreductases
domain: Tropinone reductase
species: Thale cress (Arabidopsis thaliana) [TaxId: 3702]

Probab=97.73  E-value=1.7e-05  Score=69.59  Aligned_cols=56  Identities=23%  Similarity=0.185  Sum_probs=42.9

Q ss_pred             ccCCeEEEEcCCChhHHHHHHHHHHcCCceEEEEecCCCCccc--ccc--cCCCeEEEEcc
Q 017760            9 IEGKTFLVTGGLGHVGSALCLELVRRGAYQVRAFDLRTNSPWS--HLL--INHGVHCIQGL   65 (366)
Q Consensus         9 ~~~~~VlITGgtGfiG~~L~~~L~~~g~~~V~~~dr~~~~~~~--~~~--~~~~v~~i~gD   65 (366)
                      .++++++||||++-||.++++.|++.|+ +|++.+|++.....  ..+  ...++..+.+|
T Consensus         6 LkgK~alVTGas~GIG~aiA~~la~~Ga-~V~~~~r~~~~l~~~~~~~~~~~~~~~~~~~D   65 (259)
T d1xq1a_           6 LKAKTVLVTGGTKGIGHAIVEEFAGFGA-VIHTCARNEYELNECLSKWQKKGFQVTGSVCD   65 (259)
T ss_dssp             CTTCEEEETTTTSHHHHHHHHHHHHTTC-EEEEEESCHHHHHHHHHHHHHTTCCEEEEECC
T ss_pred             CCCCEEEEeCCCCHHHHHHHHHHHHCCC-EEEEEECCHHHHHHHHHHHHhcCCceEEEecc
Confidence            5689999999999999999999999996 89999987532211  111  12457778888

>d1iy8a_ c.2.1.2 (A:) Levodione reductase {Corynebacterium aquaticum [TaxId: 144185]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Tyrosine-dependent oxidoreductases
domain: Levodione reductase
species: Corynebacterium aquaticum [TaxId: 144185]

Probab=97.72  E-value=5.2e-05  Score=66.36  Aligned_cols=56  Identities=20%  Similarity=0.251  Sum_probs=42.8

Q ss_pred             ccCCeEEEEcCCChhHHHHHHHHHHcCCceEEEEecCCCCccc--c----cccCCCeEEEEcc
Q 017760            9 IEGKTFLVTGGLGHVGSALCLELVRRGAYQVRAFDLRTNSPWS--H----LLINHGVHCIQGL   65 (366)
Q Consensus         9 ~~~~~VlITGgtGfiG~~L~~~L~~~g~~~V~~~dr~~~~~~~--~----~~~~~~v~~i~gD   65 (366)
                      .++++++||||++-||+++++.|.+.|+ +|.+.+|+......  .    .....++..+++|
T Consensus         2 l~gK~alITGas~GIG~aia~~la~~Ga-~V~i~~r~~~~l~~~~~~~~~~~~~~~~~~~~~D   63 (258)
T d1iy8a_           2 FTDRVVLITGGGSGLGRATAVRLAAEGA-KLSLVDVSSEGLEASKAAVLETAPDAEVLTTVAD   63 (258)
T ss_dssp             CTTCEEEEETTTSHHHHHHHHHHHHTTC-EEEEEESCHHHHHHHHHHHHHHCTTCCEEEEECC
T ss_pred             CCCCEEEEeCCCCHHHHHHHHHHHHCCC-EEEEEECCHHHHHHHHHHHHhhCCCCeEEEEecc
Confidence            3578999999999999999999999996 89999997532111  0    1112467788888

>d2ae2a_ c.2.1.2 (A:) Tropinone reductase {Jimsonweed (Datura stramonium), II [TaxId: 4076]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Tyrosine-dependent oxidoreductases
domain: Tropinone reductase
species: Jimsonweed (Datura stramonium), II [TaxId: 4076]

Probab=97.72  E-value=5.3e-05  Score=66.38  Aligned_cols=56  Identities=27%  Similarity=0.221  Sum_probs=42.5

Q ss_pred             ccCCeEEEEcCCChhHHHHHHHHHHcCCceEEEEecCCCCccc--ccc--cCCCeEEEEcc
Q 017760            9 IEGKTFLVTGGLGHVGSALCLELVRRGAYQVRAFDLRTNSPWS--HLL--INHGVHCIQGL   65 (366)
Q Consensus         9 ~~~~~VlITGgtGfiG~~L~~~L~~~g~~~V~~~dr~~~~~~~--~~~--~~~~v~~i~gD   65 (366)
                      .++++++||||++-||+++++.|.+.|+ +|++.+|+......  .++  ....+.++++|
T Consensus         6 L~GK~alITGas~GIG~aia~~la~~Ga-~V~~~~r~~~~l~~~~~~~~~~g~~~~~~~~D   65 (259)
T d2ae2a_           6 LEGCTALVTGGSRGIGYGIVEELASLGA-SVYTCSRNQKELNDCLTQWRSKGFKVEASVCD   65 (259)
T ss_dssp             CTTCEEEEESCSSHHHHHHHHHHHHTTC-EEEEEESCHHHHHHHHHHHHHTTCEEEEEECC
T ss_pred             CCCCEEEEeCCCCHHHHHHHHHHHHCCC-EEEEEECCHHHHHHHHHHHHhcCCCceEEEee
Confidence            4689999999999999999999999996 89999987532211  111  13456777888

>d1spxa_ c.2.1.2 (A:) Glucose dehydrogenase (5l265) {Nematode (Caenorhabditis elegans) [TaxId: 6239]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Tyrosine-dependent oxidoreductases
domain: Glucose dehydrogenase (5l265)
species: Nematode (Caenorhabditis elegans) [TaxId: 6239]

Probab=97.70  E-value=2.5e-05  Score=68.67  Aligned_cols=56  Identities=18%  Similarity=0.244  Sum_probs=43.0

Q ss_pred             ccCCeEEEEcCCChhHHHHHHHHHHcCCceEEEEecCCCCccc--ccc-----cCCCeEEEEcc
Q 017760            9 IEGKTFLVTGGLGHVGSALCLELVRRGAYQVRAFDLRTNSPWS--HLL-----INHGVHCIQGL   65 (366)
Q Consensus         9 ~~~~~VlITGgtGfiG~~L~~~L~~~g~~~V~~~dr~~~~~~~--~~~-----~~~~v~~i~gD   65 (366)
                      .+++.++||||++-||++++++|++.|+ +|++.+|+......  .++     ...++.++++|
T Consensus         3 l~gKvalVTGas~GIG~aia~~la~~Ga-~V~~~~r~~~~l~~~~~~l~~~~~~~~~~~~~~~D   65 (264)
T d1spxa_           3 FAEKVAIITGSSNGIGRATAVLFAREGA-KVTITGRHAERLEETRQQILAAGVSEQNVNSVVAD   65 (264)
T ss_dssp             TTTCEEEETTTTSHHHHHHHHHHHHTTC-EEEEEESCHHHHHHHHHHHHHTTCCGGGEEEEECC
T ss_pred             CCCCEEEEeCcCCHHHHHHHHHHHHCCC-EEEEEECCHHHHHHHHHHHHhcCCCcCceEEEEcc
Confidence            4678999999999999999999999996 89999997532211  111     12357888888

>d1gega_ c.2.1.2 (A:) meso-2,3-butanediol dehydrogenase {Klebsiella pneumoniae [TaxId: 573]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Tyrosine-dependent oxidoreductases
domain: meso-2,3-butanediol dehydrogenase
species: Klebsiella pneumoniae [TaxId: 573]

Probab=97.66  E-value=4.9e-05  Score=66.39  Aligned_cols=53  Identities=25%  Similarity=0.261  Sum_probs=40.3

Q ss_pred             CeEEEEcCCChhHHHHHHHHHHcCCceEEEEecCCCCccc--ccc--cCCCeEEEEcc
Q 017760           12 KTFLVTGGLGHVGSALCLELVRRGAYQVRAFDLRTNSPWS--HLL--INHGVHCIQGL   65 (366)
Q Consensus        12 ~~VlITGgtGfiG~~L~~~L~~~g~~~V~~~dr~~~~~~~--~~~--~~~~v~~i~gD   65 (366)
                      +.++||||++-||+++++.|.+.|+ +|.+.+|++.....  ..+  ...++..+++|
T Consensus         2 KValITGas~GIG~aia~~la~~Ga-~V~~~~r~~~~l~~~~~~i~~~g~~~~~~~~D   58 (255)
T d1gega_           2 KVALVTGAGQGIGKAIALRLVKDGF-AVAIADYNDATAKAVASEINQAGGHAVAVKVD   58 (255)
T ss_dssp             CEEEEETTTSHHHHHHHHHHHHTTC-EEEEEESCHHHHHHHHHHHHHTTCCEEEEECC
T ss_pred             CEEEEcCCccHHHHHHHHHHHHCCC-EEEEEECCHHHHHHHHHHHHhcCCcEEEEEee
Confidence            4469999999999999999999996 89999997532211  111  13467888999

>d1gz6a_ c.2.1.2 (A:) (3R)-hydroxyacyl-CoA dehydrogenase domain of estradiol 17 beta-Dehydrogenase 4 {Rat (Rattus norvegicus) [TaxId: 10116]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Tyrosine-dependent oxidoreductases
domain: (3R)-hydroxyacyl-CoA dehydrogenase domain of estradiol 17 beta-Dehydrogenase 4
species: Rat (Rattus norvegicus) [TaxId: 10116]

Probab=97.65  E-value=0.00012  Score=65.60  Aligned_cols=40  Identities=38%  Similarity=0.534  Sum_probs=35.6

Q ss_pred             ccccCCeEEEEcCCChhHHHHHHHHHHcCCceEEEEecCCC
Q 017760            7 EGIEGKTFLVTGGLGHVGSALCLELVRRGAYQVRAFDLRTN   47 (366)
Q Consensus         7 ~~~~~~~VlITGgtGfiG~~L~~~L~~~g~~~V~~~dr~~~   47 (366)
                      +..++++++||||++-||+++++.|.+.|+ +|++.|++..
T Consensus         3 m~l~gKvalITGas~GIG~aiA~~la~~Ga-~Vvi~d~~~~   42 (302)
T d1gz6a_           3 LRFDGRVVLVTGAGGGLGRAYALAFAERGA-LVVVNDLGGD   42 (302)
T ss_dssp             CCCTTCEEEETTTTSHHHHHHHHHHHHTTC-EEEEECCCBC
T ss_pred             cCcCCCEEEEeCCCCHHHHHHHHHHHHcCC-EEEEEeCCch
Confidence            346789999999999999999999999996 8999988754

>d2h7ma1 c.2.1.2 (A:2-269) Enoyl-ACP reductase {Mycobacterium tuberculosis, TB, gene InhA [TaxId: 1773]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Tyrosine-dependent oxidoreductases
domain: Enoyl-ACP reductase
species: Mycobacterium tuberculosis, TB, gene InhA [TaxId: 1773]

Probab=97.64  E-value=2.5e-05  Score=68.49  Aligned_cols=57  Identities=14%  Similarity=0.066  Sum_probs=41.1

Q ss_pred             cccCCeEEEEcCCCh--hHHHHHHHHHHcCCceEEEEecCCCCcc--cccccCCCeEEEEcc
Q 017760            8 GIEGKTFLVTGGLGH--VGSALCLELVRRGAYQVRAFDLRTNSPW--SHLLINHGVHCIQGL   65 (366)
Q Consensus         8 ~~~~~~VlITGgtGf--iG~~L~~~L~~~g~~~V~~~dr~~~~~~--~~~~~~~~v~~i~gD   65 (366)
                      ++++++++||||+|-  ||.+++++|.+.|+ +|++.+++.....  ..+....+...+++|
T Consensus         3 ~l~gK~~lItGaag~~GIG~aiA~~la~~Ga-~Vil~~~~~~~~~~~~~~~~~~~~~~~~~d   63 (268)
T d2h7ma1           3 LLDGKRILVSGIITDSSIAFHIARVAQEQGA-QLVLTGFDRLRLIQRITDRLPAKAPLLELD   63 (268)
T ss_dssp             TTTTCEEEECCCSSTTCHHHHHHHHHHHTTC-EEEEEECSCHHHHHHHHTTSSSCCCEEECC
T ss_pred             CCCCCEEEEECCCCCCHHHHHHHHHHHHcCC-EEEEEeCChHHHHHHHHHHcCCceeeEeee
Confidence            367899999998764  99999999999996 8999988753221  112223455666776

>d1edoa_ c.2.1.2 (A:) beta-keto acyl carrier protein reductase {Oil seed rape (Brassica napus) [TaxId: 3708]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Tyrosine-dependent oxidoreductases
domain: beta-keto acyl carrier protein reductase
species: Oil seed rape (Brassica napus) [TaxId: 3708]

Probab=97.64  E-value=5.2e-05  Score=65.83  Aligned_cols=53  Identities=21%  Similarity=0.210  Sum_probs=39.7

Q ss_pred             CeEEEEcCCChhHHHHHHHHHHcCCceEEEEecCCCCccc---cc--ccCCCeEEEEcc
Q 017760           12 KTFLVTGGLGHVGSALCLELVRRGAYQVRAFDLRTNSPWS---HL--LINHGVHCIQGL   65 (366)
Q Consensus        12 ~~VlITGgtGfiG~~L~~~L~~~g~~~V~~~dr~~~~~~~---~~--~~~~~v~~i~gD   65 (366)
                      +.|+||||++-+|+++++.|++.|+ +|++.+++......   +.  ..+.++.++++|
T Consensus         2 pV~lITGas~GIG~a~a~~la~~Ga-~V~i~~~~~~~~~~~~~~~~~~~g~~~~~~~~D   59 (244)
T d1edoa_           2 PVVVVTGASRGIGKAIALSLGKAGC-KVLVNYARSAKAAEEVSKQIEAYGGQAITFGGD   59 (244)
T ss_dssp             CEEEETTCSSHHHHHHHHHHHHTTC-EEEEEESSCHHHHHHHHHHHHHHTCEEEEEECC
T ss_pred             CEEEEeCCCcHHHHHHHHHHHHCCC-EEEEEeCCCHHHHHHHHHHHHHcCCcEEEEeCC
Confidence            4689999999999999999999996 89888776532211   11  123567888888

>d1hxha_ c.2.1.2 (A:) 3beta/17beta hydroxysteroid dehydrogenase {Comamonas testosteroni [TaxId: 285]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Tyrosine-dependent oxidoreductases
domain: 3beta/17beta hydroxysteroid dehydrogenase
species: Comamonas testosteroni [TaxId: 285]

Probab=97.57  E-value=1.3e-05  Score=70.24  Aligned_cols=57  Identities=25%  Similarity=0.285  Sum_probs=43.7

Q ss_pred             cccCCeEEEEcCCChhHHHHHHHHHHcCCceEEEEecCCCCccc-ccccCCCeEEEEcc
Q 017760            8 GIEGKTFLVTGGLGHVGSALCLELVRRGAYQVRAFDLRTNSPWS-HLLINHGVHCIQGL   65 (366)
Q Consensus         8 ~~~~~~VlITGgtGfiG~~L~~~L~~~g~~~V~~~dr~~~~~~~-~~~~~~~v~~i~gD   65 (366)
                      ..++++++||||++-||.++++.|++.|+ +|++.||+...... .........++++|
T Consensus         3 rL~gK~alITGas~GIG~aia~~la~~Ga-~V~~~~~~~~~~~~~~~~~~~~~~~~~~D   60 (253)
T d1hxha_           3 RLQGKVALVTGGASGVGLEVVKLLLGEGA-KVAFSDINEAAGQQLAAELGERSMFVRHD   60 (253)
T ss_dssp             TTTTCEEEETTTTSHHHHHHHHHHHHTTC-EEEEECSCHHHHHHHHHHHCTTEEEECCC
T ss_pred             CCCCCEEEEeCCCCHHHHHHHHHHHHCCC-EEEEEECCHHHHHHHHHHhCCCeEEEEee
Confidence            46789999999999999999999999996 89999987532211 11123567778888

>d1xhla_ c.2.1.2 (A:) Hypothetical protein F25D1.5 {Caenorhabditis elegans [TaxId: 6239]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Tyrosine-dependent oxidoreductases
domain: Hypothetical protein F25D1.5
species: Caenorhabditis elegans [TaxId: 6239]

Probab=97.52  E-value=8.9e-05  Score=65.42  Aligned_cols=56  Identities=16%  Similarity=0.278  Sum_probs=42.9

Q ss_pred             ccCCeEEEEcCCChhHHHHHHHHHHcCCceEEEEecCCCCccc--ccc-----cCCCeEEEEcc
Q 017760            9 IEGKTFLVTGGLGHVGSALCLELVRRGAYQVRAFDLRTNSPWS--HLL-----INHGVHCIQGL   65 (366)
Q Consensus         9 ~~~~~VlITGgtGfiG~~L~~~L~~~g~~~V~~~dr~~~~~~~--~~~-----~~~~v~~i~gD   65 (366)
                      .++++++||||++-||+++++.|++.|+ +|++.||+......  .++     ...++..+.+|
T Consensus         2 L~gK~alITGas~GIG~aia~~la~~Ga-~V~~~~r~~~~l~~~~~~i~~~~~~~~~~~~~~~D   64 (274)
T d1xhla_           2 FSGKSVIITGSSNGIGRSAAVIFAKEGA-QVTITGRNEDRLEETKQQILKAGVPAEKINAVVAD   64 (274)
T ss_dssp             CTTCEEEETTCSSHHHHHHHHHHHHTTC-EEEEEESCHHHHHHHHHHHHHTTCCGGGEEEEECC
T ss_pred             CCCCEEEEeCCCcHHHHHHHHHHHHCCC-EEEEEECCHHHHHHHHHHHHHcCCCCcceEEEEee
Confidence            3678999999999999999999999996 89999987532111  111     12457888888

>d2fr1a1 c.2.1.2 (A:1657-1915) Erythromycin synthase, eryAI, 1st ketoreductase module {Saccharopolyspora erythraea [TaxId: 1836]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Tyrosine-dependent oxidoreductases
domain: Erythromycin synthase, eryAI, 1st ketoreductase module
species: Saccharopolyspora erythraea [TaxId: 1836]

Probab=97.37  E-value=8.5e-05  Score=64.73  Aligned_cols=61  Identities=26%  Similarity=0.232  Sum_probs=43.9

Q ss_pred             ccccccCCeEEEEcCCChhHHHHHHHHHHcCCceEEEEecCCCCcc-cc----cc--cCCCeEEEEcc
Q 017760            5 ENEGIEGKTFLVTGGLGHVGSALCLELVRRGAYQVRAFDLRTNSPW-SH----LL--INHGVHCIQGL   65 (366)
Q Consensus         5 ~~~~~~~~~VlITGgtGfiG~~L~~~L~~~g~~~V~~~dr~~~~~~-~~----~~--~~~~v~~i~gD   65 (366)
                      ++...+..+++||||+|-||.++++.|.++|+.+|+.+.|+..... ..    .+  ....+.++.+|
T Consensus         3 ~~~~~p~gt~lVTGgs~GIG~a~a~~la~~Ga~~vvl~~R~~~~~~~~~~~~~~l~~~g~~v~~~~~D   70 (259)
T d2fr1a1           3 DDEWKPTGTVLVTGGTGGVGGQIARWLARRGAPHLLLVSRSGPDADGAGELVAELEALGARTTVAACD   70 (259)
T ss_dssp             SCCCCCCSEEEEETTTSHHHHHHHHHHHHHTCSEEEEEESSGGGSTTHHHHHHHHHHTTCEEEEEECC
T ss_pred             ccccCCcCEEEEECCCcHHHHHHHHHHHHCCCCEEEEEeCCccCHHHHHHHHHHHHhccccccccccc
Confidence            3444556799999999999999999999999645888877643221 11    11  23568888888

>d1mxha_ c.2.1.2 (A:) Dihydropteridin reductase (pteridine reductase) {Trypanosoma cruzi [TaxId: 5693]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Tyrosine-dependent oxidoreductases
domain: Dihydropteridin reductase (pteridine reductase)
species: Trypanosoma cruzi [TaxId: 5693]

Probab=97.35  E-value=0.00038  Score=60.36  Aligned_cols=35  Identities=20%  Similarity=0.411  Sum_probs=31.7

Q ss_pred             CeEEEEcCCChhHHHHHHHHHHcCCceEEEEecCCC
Q 017760           12 KTFLVTGGLGHVGSALCLELVRRGAYQVRAFDLRTN   47 (366)
Q Consensus        12 ~~VlITGgtGfiG~~L~~~L~~~g~~~V~~~dr~~~   47 (366)
                      .+.|||||++-||.+++++|++.|+ +|++.+|+..
T Consensus         2 ~vAlVTGas~GIG~aia~~la~~G~-~Vvi~~r~~~   36 (266)
T d1mxha_           2 PAAVITGGARRIGHSIAVRLHQQGF-RVVVHYRHSE   36 (266)
T ss_dssp             CEEEETTCSSHHHHHHHHHHHHTTC-EEEEEESSCH
T ss_pred             CEEEEeCCCCHHHHHHHHHHHHCCC-EEEEEECCch
Confidence            3579999999999999999999995 9999998854

>d1yo6a1 c.2.1.2 (A:1-250) Putative carbonyl reductase sniffer {Caenorhabditis elegans [TaxId: 6239]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Tyrosine-dependent oxidoreductases
domain: Putative carbonyl reductase sniffer
species: Caenorhabditis elegans [TaxId: 6239]

Probab=97.35  E-value=0.0001  Score=64.04  Aligned_cols=57  Identities=18%  Similarity=0.185  Sum_probs=43.7

Q ss_pred             ccCCeEEEEcCCChhHHHHHHHHHHcCC-ceEEEEecCCCCcc-cccccCCCeEEEEcc
Q 017760            9 IEGKTFLVTGGLGHVGSALCLELVRRGA-YQVRAFDLRTNSPW-SHLLINHGVHCIQGL   65 (366)
Q Consensus         9 ~~~~~VlITGgtGfiG~~L~~~L~~~g~-~~V~~~dr~~~~~~-~~~~~~~~v~~i~gD   65 (366)
                      |+.++|+||||++-||.+++++|++.|. .+|++.+|+..... ..+....++.++++|
T Consensus         1 M~~KtilITGassGIG~a~a~~la~~G~~~~Vi~~~R~~~~~~~l~~~~~~~~~~~~~D   59 (250)
T d1yo6a1           1 MSPGSVVVTGANRGIGLGLVQQLVKDKNIRHIIATARDVEKATELKSIKDSRVHVLPLT   59 (250)
T ss_dssp             CCCSEEEESSCSSHHHHHHHHHHHTCTTCCEEEEEESSGGGCHHHHTCCCTTEEEEECC
T ss_pred             CcCCEEEEeCCCCHHHHHHHHHHHHCCCCCEEEEEeCCHHHHHHHHHhhCCceEEEEEe
Confidence            4568999999999999999999999994 26888887754322 122334678999999

>d1luaa1 c.2.1.7 (A:98-288) Methylene-tetrahydromethanopterin dehydrogenase {Methylobacterium extorquens [TaxId: 408]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Aminoacid dehydrogenase-like, C-terminal domain
domain: Methylene-tetrahydromethanopterin dehydrogenase
species: Methylobacterium extorquens [TaxId: 408]

Probab=97.34  E-value=0.00012  Score=60.95  Aligned_cols=40  Identities=28%  Similarity=0.377  Sum_probs=35.9

Q ss_pred             cccCCeEEEEcCCChhHHHHHHHHHHcCCceEEEEecCCCC
Q 017760            8 GIEGKTFLVTGGLGHVGSALCLELVRRGAYQVRAFDLRTNS   48 (366)
Q Consensus         8 ~~~~~~VlITGgtGfiG~~L~~~L~~~g~~~V~~~dr~~~~   48 (366)
                      ..++++|+||||+|.+|+.+++.|.+.|. +|++++|+...
T Consensus        20 ~l~gK~vlItGasgGIG~~ia~~la~~G~-~V~~~~r~~~~   59 (191)
T d1luaa1          20 SVKGKKAVVLAGTGPVGMRSAALLAGEGA-EVVLCGRKLDK   59 (191)
T ss_dssp             CCTTCEEEEETTTSHHHHHHHHHHHHTTC-EEEEEESSHHH
T ss_pred             CCCCCEEEEECCCHHHHHHHHHHHHhhcc-chhhcccchHH
Confidence            35789999999999999999999999996 89999998643

>d1dhra_ c.2.1.2 (A:) Dihydropteridin reductase (pteridine reductase) {Rat (Rattus norvegicus) [TaxId: 10116]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Tyrosine-dependent oxidoreductases
domain: Dihydropteridin reductase (pteridine reductase)
species: Rat (Rattus norvegicus) [TaxId: 10116]

Probab=97.21  E-value=0.0002  Score=61.59  Aligned_cols=39  Identities=31%  Similarity=0.402  Sum_probs=34.8

Q ss_pred             cCCeEEEEcCCChhHHHHHHHHHHcCCceEEEEecCCCCc
Q 017760           10 EGKTFLVTGGLGHVGSALCLELVRRGAYQVRAFDLRTNSP   49 (366)
Q Consensus        10 ~~~~VlITGgtGfiG~~L~~~L~~~g~~~V~~~dr~~~~~   49 (366)
                      ++++|+||||+|-||.++++.|.++|+ +|.++|++....
T Consensus         1 egK~vlITGas~GIG~a~a~~l~~~G~-~V~~~~~~~~~~   39 (236)
T d1dhra_           1 EARRVLVYGGRGALGSRCVQAFRARNW-WVASIDVVENEE   39 (236)
T ss_dssp             CCCEEEEETTTSHHHHHHHHHHHTTTC-EEEEEESSCCTT
T ss_pred             CCCEEEEECCCCHHHHHHHHHHHHCCC-EEEEEeCCcccc
Confidence            368999999999999999999999996 899999876543

>d1bdba_ c.2.1.2 (A:) Cis-biphenyl-2,3-dihydrodiol-2,3-dehydrogenase {Pseudomonas sp., lb400 [TaxId: 306]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Tyrosine-dependent oxidoreductases
domain: Cis-biphenyl-2,3-dihydrodiol-2,3-dehydrogenase
species: Pseudomonas sp., lb400 [TaxId: 306]

Probab=97.21  E-value=8.8e-05  Score=65.52  Aligned_cols=56  Identities=29%  Similarity=0.367  Sum_probs=43.5

Q ss_pred             ccCCeEEEEcCCChhHHHHHHHHHHcCCceEEEEecCCCCccc-ccccCCCeEEEEcc
Q 017760            9 IEGKTFLVTGGLGHVGSALCLELVRRGAYQVRAFDLRTNSPWS-HLLINHGVHCIQGL   65 (366)
Q Consensus         9 ~~~~~VlITGgtGfiG~~L~~~L~~~g~~~V~~~dr~~~~~~~-~~~~~~~v~~i~gD   65 (366)
                      .++++++||||++-||+++++.|.+.|+ +|++.+|+...-.. ......++..+.+|
T Consensus         3 L~gK~alITGas~GIG~aia~~la~~Ga-~V~i~~r~~~~l~~~~~~~~~~~~~~~~D   59 (276)
T d1bdba_           3 LKGEAVLITGGASGLGRALVDRFVAEGA-KVAVLDKSAERLAELETDHGDNVLGIVGD   59 (276)
T ss_dssp             TTTCEEEEETTTSHHHHHHHHHHHHTTC-EEEEEESCHHHHHHHHHHHGGGEEEEECC
T ss_pred             CCCCEEEEeCCCCHHHHHHHHHHHHCCC-EEEEEECCHHHHHHHHHHcCCCeeEEecc
Confidence            5679999999999999999999999996 89999987532111 11123567888888

>d1fjha_ c.2.1.2 (A:) 3-alpha-hydroxysteroid dehydrogenase {Comamonas testosteroni [TaxId: 285]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Tyrosine-dependent oxidoreductases
domain: 3-alpha-hydroxysteroid dehydrogenase
species: Comamonas testosteroni [TaxId: 285]

Probab=97.19  E-value=0.00019  Score=62.05  Aligned_cols=36  Identities=22%  Similarity=0.315  Sum_probs=32.9

Q ss_pred             CCeEEEEcCCChhHHHHHHHHHHcCCceEEEEecCCC
Q 017760           11 GKTFLVTGGLGHVGSALCLELVRRGAYQVRAFDLRTN   47 (366)
Q Consensus        11 ~~~VlITGgtGfiG~~L~~~L~~~g~~~V~~~dr~~~   47 (366)
                      |+.|+||||++-||.++++.|.+.|+ +|++.|+++.
T Consensus         1 mkVvlITGas~GIG~aiA~~la~~Ga-~V~~~~~~~~   36 (257)
T d1fjha_           1 MSIIVISGCATGIGAATRKVLEAAGH-QIVGIDIRDA   36 (257)
T ss_dssp             CCEEEEETTTSHHHHHHHHHHHHTTC-EEEEEESSSS
T ss_pred             CCEEEEeCCCCHHHHHHHHHHHHCCC-EEEEEECChH
Confidence            57789999999999999999999996 8999999864

>d1jaya_ c.2.1.6 (A:) Coenzyme F420H2:NADP+ oxidoreductase (FNO) {Archaeon Archaeoglobus fulgidus [TaxId: 2234]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: 6-phosphogluconate dehydrogenase-like, N-terminal domain
domain: Coenzyme F420H2:NADP+ oxidoreductase (FNO)
species: Archaeon Archaeoglobus fulgidus [TaxId: 2234]

Probab=97.17  E-value=0.00014  Score=59.56  Aligned_cols=35  Identities=26%  Similarity=0.411  Sum_probs=32.1

Q ss_pred             CeEEEEcCCChhHHHHHHHHHHcCCceEEEEecCCC
Q 017760           12 KTFLVTGGLGHVGSALCLELVRRGAYQVRAFDLRTN   47 (366)
Q Consensus        12 ~~VlITGgtGfiG~~L~~~L~~~g~~~V~~~dr~~~   47 (366)
                      |||.|+||+|-+|+++++.|.+.| |+|.+.+|++.
T Consensus         1 Mki~vigGaG~iG~alA~~la~~G-~~V~l~~R~~e   35 (212)
T d1jaya_           1 MRVALLGGTGNLGKGLALRLATLG-HEIVVGSRREE   35 (212)
T ss_dssp             CEEEEETTTSHHHHHHHHHHHTTT-CEEEEEESSHH
T ss_pred             CEEEEEeCCcHHHHHHHHHHHHCC-CEEEEEECCHH
Confidence            689999999999999999999999 69999999753

>d2pv7a2 c.2.1.6 (A:92-243) Prephenate dehydrogenase TyrA {Haemophilus influenzae [TaxId: 727]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: 6-phosphogluconate dehydrogenase-like, N-terminal domain
domain: Prephenate dehydrogenase TyrA
species: Haemophilus influenzae [TaxId: 727]

Probab=97.16  E-value=0.00022  Score=56.81  Aligned_cols=41  Identities=20%  Similarity=0.384  Sum_probs=35.9

Q ss_pred             cccCCeEEEEcCCChhHHHHHHHHHHcCCceEEEEecCCCCc
Q 017760            8 GIEGKTFLVTGGLGHVGSALCLELVRRGAYQVRAFDLRTNSP   49 (366)
Q Consensus         8 ~~~~~~VlITGgtGfiG~~L~~~L~~~g~~~V~~~dr~~~~~   49 (366)
                      ...+++|.|.||.|.+|+.+++.|.+.| ++|.+.|++....
T Consensus         6 ~~~~~kI~iIGg~G~mG~~la~~L~~~G-~~V~~~d~~~~~~   46 (152)
T d2pv7a2           6 NSDIHKIVIVGGYGKLGGLFARYLRASG-YPISILDREDWAV   46 (152)
T ss_dssp             CTTCCCEEEETTTSHHHHHHHHHHHTTT-CCEEEECTTCGGG
T ss_pred             CCCCCeEEEEcCCCHHHHHHHHHHHHcC-CCcEecccccccc
Confidence            3557899999999999999999999999 5999999986543

>d1yb1a_ c.2.1.2 (A:) 17-beta-hydroxysteroid dehydrogenase type XI {Human (Homo sapiens) [TaxId: 9606]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Tyrosine-dependent oxidoreductases
domain: 17-beta-hydroxysteroid dehydrogenase type XI
species: Human (Homo sapiens) [TaxId: 9606]

Probab=97.14  E-value=0.00016  Score=62.58  Aligned_cols=124  Identities=11%  Similarity=0.040  Sum_probs=76.7

Q ss_pred             cccCCeEEEEcCCChhHHHHHHHHHHcCCceEEEEecCCCCccc--cc--ccCCCeEEEEcc------------cc-CCC
Q 017760            8 GIEGKTFLVTGGLGHVGSALCLELVRRGAYQVRAFDLRTNSPWS--HL--LINHGVHCIQGL------------RK-NNR   70 (366)
Q Consensus         8 ~~~~~~VlITGgtGfiG~~L~~~L~~~g~~~V~~~dr~~~~~~~--~~--~~~~~v~~i~gD------------ks-~~~   70 (366)
                      ...+++++||||++-||++++++|.+.|+ +|++.||+...-..  .+  ..+.++..+.+|            +. ...
T Consensus         4 ~l~Gkv~lITGas~GIG~~ia~~la~~G~-~V~l~~r~~~~l~~~~~~~~~~~~~~~~~~~Dvs~~~~v~~~~~~i~~~~   82 (244)
T d1yb1a_           4 SVTGEIVLITGAGHGIGRLTAYEFAKLKS-KLVLWDINKHGLEETAAKCKGLGAKVHTFVVDCSNREDIYSSAKKVKAEI   82 (244)
T ss_dssp             CCTTCEEEEETTTSHHHHHHHHHHHHTTC-EEEEEESCHHHHHHHHHHHHHTTCCEEEEECCTTCHHHHHHHHHHHHHHT
T ss_pred             CCCCCEEEEeCCCcHHHHHHHHHHHHCCC-EEEEEECCHHHHHHHHHHHHhcCCcEEEEEeeCCCHHHHHHHHHHHHHHc
Confidence            46789999999999999999999999996 89999997643211  11  123568889999            11 233


Q ss_pred             CCceEEEEeCCccccCCCCC-CHHHHHHHHHcCCCCeeecCCCcceeceeHHHHHHHHHHHHhccccCCCCCCCCCCCCC
Q 017760           71 KCLYTCAVRPAAIYGPGEER-HLPRIVSLAKLGLVPFKIGEPSVKTDWIYVDNLVLALILASMGLLDDIPGQKGRPIASG  149 (366)
Q Consensus        71 ~~l~~~ilRp~~iyGp~~~~-~l~~~i~~~~~g~~~~~~g~~~~~~~~v~vdDla~a~~~a~~~l~~~~~~~~~~~~~~g  149 (366)
                      +.++..+- -+++..++... ......+..             ...++...-.++++.+..+.+            ...|
T Consensus        83 g~idilin-nag~~~~~~~~~~~~~~~~~~-------------~~vN~~g~~~l~~~~lp~m~~------------~~~G  136 (244)
T d1yb1a_          83 GDVSILVN-NAGVVYTSDLFATQDPQIEKT-------------FEVNVLAHFWTTKAFLPAMTK------------NNHG  136 (244)
T ss_dssp             CCCSEEEE-CCCCCCCCCCGGGHHHHHHHH-------------HHHHTHHHHHHHHHHHHHHHH------------TTCE
T ss_pred             CCCceeEe-eccccccccccccchhHHHhh-------------cceeeeccHHHHHHHhhhHHh------------cCCc
Confidence            45666554 44444333221 111111111             113455555777777777752            2357


Q ss_pred             ccEEecCCC
Q 017760          150 QPYFVSDGF  158 (366)
Q Consensus       150 ~~y~I~~~~  158 (366)
                      .+.|+++..
T Consensus       137 ~Iv~isS~~  145 (244)
T d1yb1a_         137 HIVTVASAA  145 (244)
T ss_dssp             EEEEECCCC
T ss_pred             eEEEeecch
Confidence            788887654

>d1xu9a_ c.2.1.2 (A:) 11-beta-hydroxysteroid dehydrogenase 1 {Human (Homo sapiens) [TaxId: 9606]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Tyrosine-dependent oxidoreductases
domain: 11-beta-hydroxysteroid dehydrogenase 1
species: Human (Homo sapiens) [TaxId: 9606]

Probab=97.13  E-value=0.0002  Score=62.87  Aligned_cols=57  Identities=25%  Similarity=0.316  Sum_probs=43.0

Q ss_pred             cccCCeEEEEcCCChhHHHHHHHHHHcCCceEEEEecCCCCccc-----ccccCCCeEEEEcc
Q 017760            8 GIEGKTFLVTGGLGHVGSALCLELVRRGAYQVRAFDLRTNSPWS-----HLLINHGVHCIQGL   65 (366)
Q Consensus         8 ~~~~~~VlITGgtGfiG~~L~~~L~~~g~~~V~~~dr~~~~~~~-----~~~~~~~v~~i~gD   65 (366)
                      +.++++++|||||+-||.++++.|++.|+ +|++.+|+......     .......+..+..|
T Consensus        11 ~L~GK~alITGassGIG~aiA~~la~~G~-~Vil~~r~~~~l~~~~~~~~~~~~~~~~~~~~d   72 (269)
T d1xu9a_          11 MLQGKKVIVTGASKGIGREMAYHLAKMGA-HVVVTARSKETLQKVVSHCLELGAASAHYIAGT   72 (269)
T ss_dssp             GGTTCEEEESSCSSHHHHHHHHHHHHTTC-EEEEEESCHHHHHHHHHHHHHHTCSEEEEEECC
T ss_pred             ccCCCEEEEeCCCcHHHHHHHHHHHHCCC-EEEEEECCHHHHHHHHHHHhhhhcccchhhhhh
Confidence            46789999999999999999999999996 89999998532211     11123456666666

>d1zmta1 c.2.1.2 (A:2-253) Halohydrin dehalogenase HheC {Agrobacterium tumefaciens [TaxId: 358]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Tyrosine-dependent oxidoreductases
domain: Halohydrin dehalogenase HheC
species: Agrobacterium tumefaciens [TaxId: 358]

Probab=97.10  E-value=0.00013  Score=63.42  Aligned_cols=34  Identities=26%  Similarity=0.195  Sum_probs=31.2

Q ss_pred             eEEEEcCCChhHHHHHHHHHHcCCceEEEEecCCC
Q 017760           13 TFLVTGGLGHVGSALCLELVRRGAYQVRAFDLRTN   47 (366)
Q Consensus        13 ~VlITGgtGfiG~~L~~~L~~~g~~~V~~~dr~~~   47 (366)
                      |++||||++-+|.++++.|.+.|+ +|.+.||+..
T Consensus         2 TAlVTGas~GiG~aiA~~la~~Ga-~V~i~~r~~~   35 (252)
T d1zmta1           2 TAIVTNVKHFGGMGSALRLSEAGH-TVACHDESFK   35 (252)
T ss_dssp             EEEESSTTSTTHHHHHHHHHHTTC-EEEECCGGGG
T ss_pred             EEEEECCCCHHHHHHHHHHHHCCC-EEEEEECCHH
Confidence            789999999999999999999995 8999998753

>d1snya_ c.2.1.2 (A:) Carbonyl reductase sniffer {Fruit fly (Drosophila melanogaster) [TaxId: 7227]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Tyrosine-dependent oxidoreductases
domain: Carbonyl reductase sniffer
species: Fruit fly (Drosophila melanogaster) [TaxId: 7227]

Probab=97.08  E-value=0.00026  Score=61.19  Aligned_cols=54  Identities=13%  Similarity=0.055  Sum_probs=42.3

Q ss_pred             CCeEEEEcCCChhHHHHHHHHHH---cCCceEEEEecCCCCccc-cc--ccCCCeEEEEcc
Q 017760           11 GKTFLVTGGLGHVGSALCLELVR---RGAYQVRAFDLRTNSPWS-HL--LINHGVHCIQGL   65 (366)
Q Consensus        11 ~~~VlITGgtGfiG~~L~~~L~~---~g~~~V~~~dr~~~~~~~-~~--~~~~~v~~i~gD   65 (366)
                      |++|+||||++-||.++++.|++   .|+ +|++.+|+...... .+  ....++.++.+|
T Consensus         2 MKtilITGas~GIG~a~a~~l~~~a~~g~-~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~D   61 (248)
T d1snya_           2 MNSILITGCNRGLGLGLVKALLNLPQPPQ-HLFTTCRNREQAKELEDLAKNHSNIHILEID   61 (248)
T ss_dssp             CSEEEESCCSSHHHHHHHHHHHTSSSCCS-EEEEEESCTTSCHHHHHHHHHCTTEEEEECC
T ss_pred             cCEEEEeCCCCHHHHHHHHHHHHHHhCCC-EEEEEECCHHHHHHHHHHHhcCCcEEEEEEE
Confidence            68999999999999999999974   674 89999998755422 11  124678889998

>d1sbya1 c.2.1.2 (A:1-254) Drosophila alcohol dehydrogenase {Fly (Drosophila lebanonensis) [TaxId: 7225]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Tyrosine-dependent oxidoreductases
domain: Drosophila alcohol dehydrogenase
species: Fly (Drosophila lebanonensis) [TaxId: 7225]

Probab=97.07  E-value=0.00036  Score=60.64  Aligned_cols=56  Identities=18%  Similarity=0.146  Sum_probs=42.4

Q ss_pred             ccCCeEEEEcCCChhHHHHHHHHHHcCCceEEEEecCCCCccc-cc----ccCCCeEEEEcc
Q 017760            9 IEGKTFLVTGGLGHVGSALCLELVRRGAYQVRAFDLRTNSPWS-HL----LINHGVHCIQGL   65 (366)
Q Consensus         9 ~~~~~VlITGgtGfiG~~L~~~L~~~g~~~V~~~dr~~~~~~~-~~----~~~~~v~~i~gD   65 (366)
                      .++++|+||||++-||..++++|+++|. +|++++++...... .+    ....++.++..|
T Consensus         3 l~gK~vlITGgs~GIG~~~A~~la~~G~-~vii~~r~~~~~~~~~~~~~~~~~~~~~~~~~d   63 (254)
T d1sbya1           3 LTNKNVIFVAALGGIGLDTSRELVKRNL-KNFVILDRVENPTALAELKAINPKVNITFHTYD   63 (254)
T ss_dssp             CTTCEEEEETTTSHHHHHHHHHHHHTCC-SEEEEEESSCCHHHHHHHHHHCTTSEEEEEECC
T ss_pred             CCCCEEEEecCCCHHHHHHHHHHHHCCC-EEEEEECCcccHHHHHHHHhhCCCCCEEEEEee
Confidence            5689999999999999999999999996 78888877654321 11    112467777777

>d1ooea_ c.2.1.2 (A:) Dihydropteridin reductase (pteridine reductase) {Nematode (Caenorhabditis elegans) [TaxId: 6239]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Tyrosine-dependent oxidoreductases
domain: Dihydropteridin reductase (pteridine reductase)
species: Nematode (Caenorhabditis elegans) [TaxId: 6239]

Probab=97.01  E-value=0.00032  Score=60.05  Aligned_cols=36  Identities=33%  Similarity=0.472  Sum_probs=32.9

Q ss_pred             CeEEEEcCCChhHHHHHHHHHHcCCceEEEEecCCCC
Q 017760           12 KTFLVTGGLGHVGSALCLELVRRGAYQVRAFDLRTNS   48 (366)
Q Consensus        12 ~~VlITGgtGfiG~~L~~~L~~~g~~~V~~~dr~~~~   48 (366)
                      .||+||||+|-||+++++.|.++|+ +|+++||++..
T Consensus         3 gkVlITGas~GIG~aia~~l~~~G~-~V~~~~~~~~~   38 (235)
T d1ooea_           3 GKVIVYGGKGALGSAILEFFKKNGY-TVLNIDLSAND   38 (235)
T ss_dssp             EEEEEETTTSHHHHHHHHHHHHTTE-EEEEEESSCCT
T ss_pred             CEEEEECCCCHHHHHHHHHHHHCCC-EEEEEECCchh
Confidence            5799999999999999999999995 89999998754

>d1xg5a_ c.2.1.2 (A:) Putative dehydrogenase ARPG836 (MGC4172) {Human (Homo sapiens) [TaxId: 9606]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Tyrosine-dependent oxidoreductases
domain: Putative dehydrogenase ARPG836 (MGC4172)
species: Human (Homo sapiens) [TaxId: 9606]

Probab=96.99  E-value=0.0004  Score=60.42  Aligned_cols=59  Identities=20%  Similarity=0.130  Sum_probs=44.5

Q ss_pred             cccccCCeEEEEcCCChhHHHHHHHHHHcCCceEEEEecCCCCccc--cccc----CCCeEEEEcc
Q 017760            6 NEGIEGKTFLVTGGLGHVGSALCLELVRRGAYQVRAFDLRTNSPWS--HLLI----NHGVHCIQGL   65 (366)
Q Consensus         6 ~~~~~~~~VlITGgtGfiG~~L~~~L~~~g~~~V~~~dr~~~~~~~--~~~~----~~~v~~i~gD   65 (366)
                      ++..++++++||||++-||.++++.|.+.|+ +|++.+|+...-..  .++.    +..+..+++|
T Consensus         5 M~~lk~Kv~lITGas~GIG~aiA~~la~~G~-~Vv~~~r~~~~l~~~~~~l~~~~~~~~~~~~~~D   69 (257)
T d1xg5a_           5 MERWRDRLALVTGASGGIGAAVARALVQQGL-KVVGCARTVGNIEELAAECKSAGYPGTLIPYRCD   69 (257)
T ss_dssp             CGGGTTCEEEEESTTSHHHHHHHHHHHHTTC-EEEEEESCHHHHHHHHHHHHHTTCSSEEEEEECC
T ss_pred             CCCCCCCEEEEeCCCCHHHHHHHHHHHHCCC-EEEEEECCHHHHHHHHHHHHhcCCCceEEEEEcc
Confidence            3446689999999999999999999999996 89999987532111  1111    2367788999

>d1lssa_ c.2.1.9 (A:) Ktn Mja218 {Archaeon Methanococcus jannaschii [TaxId: 2190]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Potassium channel NAD-binding domain
domain: Ktn Mja218
species: Archaeon Methanococcus jannaschii [TaxId: 2190]

Probab=96.99  E-value=0.0002  Score=55.67  Aligned_cols=34  Identities=24%  Similarity=0.458  Sum_probs=30.6

Q ss_pred             CeEEEEcCCChhHHHHHHHHHHcCCceEEEEecCCC
Q 017760           12 KTFLVTGGLGHVGSALCLELVRRGAYQVRAFDLRTN   47 (366)
Q Consensus        12 ~~VlITGgtGfiG~~L~~~L~~~g~~~V~~~dr~~~   47 (366)
                      |+|+|+|+ |.+|+++++.|.+.| ++|+++|.++.
T Consensus         1 M~IvI~G~-G~~G~~la~~L~~~g-~~v~vid~d~~   34 (132)
T d1lssa_           1 MYIIIAGI-GRVGYTLAKSLSEKG-HDIVLIDIDKD   34 (132)
T ss_dssp             CEEEEECC-SHHHHHHHHHHHHTT-CEEEEEESCHH
T ss_pred             CEEEEECC-CHHHHHHHHHHHHCC-CCcceecCChh
Confidence            68999987 999999999999999 59999998753

>d1e5qa1 c.2.1.3 (A:2-124,A:392-450) Saccharopine reductase {Rice blast fungus (Magnaporthe grisea) [TaxId: 148305]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Glyceraldehyde-3-phosphate dehydrogenase-like, N-terminal domain
domain: Saccharopine reductase
species: Rice blast fungus (Magnaporthe grisea) [TaxId: 148305]

Probab=96.68  E-value=0.00086  Score=54.08  Aligned_cols=36  Identities=25%  Similarity=0.217  Sum_probs=31.9

Q ss_pred             CCeEEEEcCCChhHHHHHHHHHHcCCceEEEEecCCCC
Q 017760           11 GKTFLVTGGLGHVGSALCLELVRRGAYQVRAFDLRTNS   48 (366)
Q Consensus        11 ~~~VlITGgtGfiG~~L~~~L~~~g~~~V~~~dr~~~~   48 (366)
                      .++|+|.|+ |++|+.+++.|.+.| ++|+++||+...
T Consensus         2 ~K~IliiGa-G~~G~~~a~~L~~~g-~~V~v~dr~~~~   37 (182)
T d1e5qa1           2 TKSVLMLGS-GFVTRPTLDVLTDSG-IKVTVACRTLES   37 (182)
T ss_dssp             CCEEEEECC-STTHHHHHHHHHTTT-CEEEEEESCHHH
T ss_pred             CCEEEEECC-CHHHHHHHHHHHhCC-CEEEEEECChHH
Confidence            478999865 999999999999999 599999998753

>d2bd0a1 c.2.1.2 (A:2-241) Bacterial sepiapterin reductase {Chlorobium tepidum [TaxId: 1097]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Tyrosine-dependent oxidoreductases
domain: Bacterial sepiapterin reductase
species: Chlorobium tepidum [TaxId: 1097]

Probab=96.64  E-value=0.0019  Score=55.37  Aligned_cols=53  Identities=17%  Similarity=0.073  Sum_probs=38.3

Q ss_pred             eEEEEcCCChhHHHHHHHHHHcCCc------eEEEEecCCCCccc--ccc--cCCCeEEEEcc
Q 017760           13 TFLVTGGLGHVGSALCLELVRRGAY------QVRAFDLRTNSPWS--HLL--INHGVHCIQGL   65 (366)
Q Consensus        13 ~VlITGgtGfiG~~L~~~L~~~g~~------~V~~~dr~~~~~~~--~~~--~~~~v~~i~gD   65 (366)
                      -|+||||++-||+++++.|.+.|++      .|...+|+......  ..+  ....+.++.+|
T Consensus         3 VvlITGas~GIG~aia~~la~~G~~~~~~~~~v~~~~r~~~~l~~~~~~~~~~g~~~~~~~~D   65 (240)
T d2bd0a1           3 ILLITGAGKGIGRAIALEFARAARHHPDFEPVLVLSSRTAADLEKISLECRAEGALTDTITAD   65 (240)
T ss_dssp             EEEEETTTSHHHHHHHHHHHHHTTTCTTCCEEEEEEESCHHHHHHHHHHHHTTTCEEEEEECC
T ss_pred             EEEEccCCCHHHHHHHHHHHHhCccccccCcEEEEEeCCHHHHHHHHHHHHhcCCcEEEEEec
Confidence            3789999999999999999999962      28888887532111  111  23467788889

>d1xkqa_ c.2.1.2 (A:) Hypothetical protein R05D8.7 {Caenorhabditis elegans [TaxId: 6239]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Tyrosine-dependent oxidoreductases
domain: Hypothetical protein R05D8.7
species: Caenorhabditis elegans [TaxId: 6239]

Probab=96.51  E-value=0.0011  Score=58.00  Aligned_cols=56  Identities=16%  Similarity=0.268  Sum_probs=43.2

Q ss_pred             ccCCeEEEEcCCChhHHHHHHHHHHcCCceEEEEecCCCCccc--ccc-----cCCCeEEEEcc
Q 017760            9 IEGKTFLVTGGLGHVGSALCLELVRRGAYQVRAFDLRTNSPWS--HLL-----INHGVHCIQGL   65 (366)
Q Consensus         9 ~~~~~VlITGgtGfiG~~L~~~L~~~g~~~V~~~dr~~~~~~~--~~~-----~~~~v~~i~gD   65 (366)
                      .++++++||||++-||.++++.|.+.|+ +|++.+|+......  ..+     ...++..+++|
T Consensus         3 L~gK~alVTGas~GIG~aia~~la~~Ga-~V~l~~r~~~~l~~~~~~l~~~~~~~~~~~~~~~D   65 (272)
T d1xkqa_           3 FSNKTVIITGSSNGIGRTTAILFAQEGA-NVTITGRSSERLEETRQIILKSGVSEKQVNSVVAD   65 (272)
T ss_dssp             TTTCEEEETTCSSHHHHHHHHHHHHTTC-EEEEEESCHHHHHHHHHHHHTTTCCGGGEEEEECC
T ss_pred             CCCCEEEEeCcCcHHHHHHHHHHHHCCC-EEEEEECCHHHHHHHHHHHHhcCCCCCceEEEEcc
Confidence            4678999999999999999999999996 89999987532111  111     12357888998

>d1d7oa_ c.2.1.2 (A:) Enoyl-ACP reductase {Oil seed rape (Brassica napus) [TaxId: 3708]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Tyrosine-dependent oxidoreductases
domain: Enoyl-ACP reductase
species: Oil seed rape (Brassica napus) [TaxId: 3708]

Probab=96.11  E-value=0.003  Score=55.39  Aligned_cols=38  Identities=21%  Similarity=0.245  Sum_probs=33.6

Q ss_pred             cccCCeEEEEcCCC--hhHHHHHHHHHHcCCceEEEEecCC
Q 017760            8 GIEGKTFLVTGGLG--HVGSALCLELVRRGAYQVRAFDLRT   46 (366)
Q Consensus         8 ~~~~~~VlITGgtG--fiG~~L~~~L~~~g~~~V~~~dr~~   46 (366)
                      .+++++++||||+|  -||.++++.|.+.|+ +|++.++++
T Consensus         5 ~L~gK~alVTGass~~GIG~aiA~~la~~Ga-~Vvi~~~~~   44 (297)
T d1d7oa_           5 DLRGKRAFIAGIADDNGYGWAVAKSLAAAGA-EILVGTWVP   44 (297)
T ss_dssp             CCTTCEEEEECCSSSSSHHHHHHHHHHHTTC-EEEEEEEHH
T ss_pred             CCCCCEEEEECCCCCchHHHHHHHHHHHCCC-EEEEEeCch
Confidence            46789999999988  799999999999996 899998753

>d1wmaa1 c.2.1.2 (A:2-276) Carbonyl reductase/20beta-hydroxysteroid dehydrogenase {Human (Homo sapiens) [TaxId: 9606]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Tyrosine-dependent oxidoreductases
domain: Carbonyl reductase/20beta-hydroxysteroid dehydrogenase
species: Human (Homo sapiens) [TaxId: 9606]

Probab=96.09  E-value=0.0014  Score=57.25  Aligned_cols=54  Identities=24%  Similarity=0.161  Sum_probs=41.3

Q ss_pred             CCeE-EEEcCCChhHHHHHHHHHHc-CCceEEEEecCCCCccc--ccc--cCCCeEEEEcc
Q 017760           11 GKTF-LVTGGLGHVGSALCLELVRR-GAYQVRAFDLRTNSPWS--HLL--INHGVHCIQGL   65 (366)
Q Consensus        11 ~~~V-lITGgtGfiG~~L~~~L~~~-g~~~V~~~dr~~~~~~~--~~~--~~~~v~~i~gD   65 (366)
                      +++| +||||++-||.++++.|.+. |. +|++.+|+......  .++  ...+++++++|
T Consensus         2 g~rVAlVTGas~GIG~a~A~~la~~~g~-~Vi~~~r~~~~~~~~~~~l~~~~~~~~~~~~D   61 (275)
T d1wmaa1           2 GIHVALVTGGNKGIGLAIVRDLCRLFSG-DVVLTARDVTRGQAAVQQLQAEGLSPRFHQLD   61 (275)
T ss_dssp             CCCEEEESSCSSHHHHHHHHHHHHHSSS-EEEEEESSHHHHHHHHHHHHHTTCCCEEEECC
T ss_pred             CCeEEEECCCCCHHHHHHHHHHHHhCCC-EEEEEECCHHHHHHHHHHHHhcCCcEEEEEEe
Confidence            5667 89999999999999999986 74 89999998643221  111  23578899999

>d1ks9a2 c.2.1.6 (A:1-167) Ketopantoate reductase PanE {Escherichia coli [TaxId: 562]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: 6-phosphogluconate dehydrogenase-like, N-terminal domain
domain: Ketopantoate reductase PanE
species: Escherichia coli [TaxId: 562]

Probab=96.08  E-value=0.0033  Score=49.94  Aligned_cols=35  Identities=20%  Similarity=0.298  Sum_probs=31.5

Q ss_pred             CeEEEEcCCChhHHHHHHHHHHcCCceEEEEecCCCC
Q 017760           12 KTFLVTGGLGHVGSALCLELVRRGAYQVRAFDLRTNS   48 (366)
Q Consensus        12 ~~VlITGgtGfiG~~L~~~L~~~g~~~V~~~dr~~~~   48 (366)
                      |||+|.|+ |.+|+.++..|.+.| ++|..++|++..
T Consensus         1 MkI~IiGa-G~iG~~~a~~L~~~G-~~V~~~~r~~~~   35 (167)
T d1ks9a2           1 MKITVLGC-GALGQLWLTALCKQG-HEVQGWLRVPQP   35 (167)
T ss_dssp             CEEEEECC-SHHHHHHHHHHHHTT-CEEEEECSSCCS
T ss_pred             CEEEEECc-CHHHHHHHHHHHHCC-CceEEEEcCHHH
Confidence            68999977 999999999999999 699999988653

>d1t4ba1 c.2.1.3 (A:1-133,A:355-367) Aspartate beta-semialdehyde dehydrogenase {Escherichia coli [TaxId: 562]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Glyceraldehyde-3-phosphate dehydrogenase-like, N-terminal domain
domain: Aspartate beta-semialdehyde dehydrogenase
species: Escherichia coli [TaxId: 562]

Probab=95.98  E-value=0.0061  Score=47.89  Aligned_cols=37  Identities=24%  Similarity=0.179  Sum_probs=28.5

Q ss_pred             CCeEEEEcCCChhHHHHHHHHHHcC---CceEEEEecCCC
Q 017760           11 GKTFLVTGGLGHVGSALCLELVRRG---AYQVRAFDLRTN   47 (366)
Q Consensus        11 ~~~VlITGgtGfiG~~L~~~L~~~g---~~~V~~~dr~~~   47 (366)
                      |++|.|.||||++|+.+++.|++..   ..+++.+..+..
T Consensus         1 MkkVaIvGATG~VGqeli~~Ll~~~~~p~~~l~~~~ss~s   40 (146)
T d1t4ba1           1 MQNVGFIGWRGMVGSVLMQRMVEERDFDAIRPVFFSTSQL   40 (146)
T ss_dssp             CCEEEEESTTSHHHHHHHHHHHHTTGGGGSEEEEEESSST
T ss_pred             CcEEEEECCccHHHHHHHHHHHhCCCCCeeEEEEeecccc
Confidence            5789999999999999999888653   235666655543

>d2hmva1 c.2.1.9 (A:7-140) Ktn bsu222 {Bacillus subtilis [TaxId: 1423]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Potassium channel NAD-binding domain
domain: Ktn bsu222
species: Bacillus subtilis [TaxId: 1423]

Probab=95.78  E-value=0.0028  Score=48.81  Aligned_cols=34  Identities=41%  Similarity=0.643  Sum_probs=29.2

Q ss_pred             CeEEEEcCCChhHHHHHHHHHHcCCceEEEEecCCC
Q 017760           12 KTFLVTGGLGHVGSALCLELVRRGAYQVRAFDLRTN   47 (366)
Q Consensus        12 ~~VlITGgtGfiG~~L~~~L~~~g~~~V~~~dr~~~   47 (366)
                      ++++|.| .|.+|+++++.|.+.| ++|+++|.++.
T Consensus         1 k~~iIiG-~G~~G~~la~~L~~~g-~~vvvid~d~~   34 (134)
T d2hmva1           1 KQFAVIG-LGRFGGSIVKELHRMG-HEVLAVDINEE   34 (134)
T ss_dssp             CCEEEEC-CSHHHHHHHHHHHHTT-CCCEEEESCHH
T ss_pred             CEEEEEC-CCHHHHHHHHHHHHCC-CeEEEecCcHH
Confidence            4688885 5999999999999999 59999998753

>d1oaaa_ c.2.1.2 (A:) Sepiapterin reductase {Mouse (Mus musculus) [TaxId: 10090]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Tyrosine-dependent oxidoreductases
domain: Sepiapterin reductase
species: Mouse (Mus musculus) [TaxId: 10090]

Probab=95.77  E-value=0.0037  Score=53.92  Aligned_cols=58  Identities=19%  Similarity=0.157  Sum_probs=43.3

Q ss_pred             ccccCCeEEEEcCCChhHHHHHHHHHH---cCCceEEEEecCCCCccc--ccc----cCCCeEEEEcc
Q 017760            7 EGIEGKTFLVTGGLGHVGSALCLELVR---RGAYQVRAFDLRTNSPWS--HLL----INHGVHCIQGL   65 (366)
Q Consensus         7 ~~~~~~~VlITGgtGfiG~~L~~~L~~---~g~~~V~~~dr~~~~~~~--~~~----~~~~v~~i~gD   65 (366)
                      +.++++.++||||++-||.+++++|.+   +|+ +|++.+|+......  ..+    ...++.++++|
T Consensus         2 ~~L~gKvalITGas~GIG~aiA~~lA~~~~~G~-~Vv~~~r~~~~l~~~~~~l~~~~~~~~~~~~~~D   68 (259)
T d1oaaa_           2 DGLGCAVCVLTGASRGFGRALAPQLARLLSPGS-VMLVSARSESMLRQLKEELGAQQPDLKVVLAAAD   68 (259)
T ss_dssp             CCCBSEEEEESSCSSHHHHHHHHHHHTTBCTTC-EEEEEESCHHHHHHHHHHHHHHCTTSEEEEEECC
T ss_pred             CCCCCCEEEEeCCCCHHHHHHHHHHHhcccCCC-EEEEEECCHHHHHHHHHHHHhhcCCceEEEEEcc
Confidence            356788999999999999999999986   685 89999987643211  111    12367888999

>d1o8ca2 c.2.1.1 (A:116-192) Hypothetical protein YhdH {Escherichia coli [TaxId: 562]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Alcohol dehydrogenase-like, C-terminal domain
domain: Hypothetical protein YhdH
species: Escherichia coli [TaxId: 562]

Probab=95.44  E-value=0.0065  Score=42.16  Aligned_cols=38  Identities=34%  Similarity=0.349  Sum_probs=33.2

Q ss_pred             ccCCeEEEEcCCChhHHHHHHHHHHcCCceEEEEecCCC
Q 017760            9 IEGKTFLVTGGLGHVGSALCLELVRRGAYQVRAFDLRTN   47 (366)
Q Consensus         9 ~~~~~VlITGgtGfiG~~L~~~L~~~g~~~V~~~dr~~~   47 (366)
                      .++++|+|+||+|-+|...++.+...|. +|+++.+++.
T Consensus        30 ~~~~~vlI~gasGgVG~~aiQlak~~G~-~Vi~~t~s~~   67 (77)
T d1o8ca2          30 PQDGEIVVTGASGGVGSTAVALLHKLGY-QVVAVSGRES   67 (77)
T ss_dssp             GGGCEEEESSTTSHHHHHHHHHHHHTTC-CEEEEESCGG
T ss_pred             cCCCcEEEEeCCCcHHHHHHHHHHHcCC-eEEEEECCHH
Confidence            3567899999999999999999899996 8999987754

>d1hyea1 c.2.1.5 (A:1-145) MJ0490, lactate/malate dehydrogenase {Archaeon Methanococcus jannaschii [TaxId: 2190]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: LDH N-terminal domain-like
domain: MJ0490, lactate/malate dehydrogenase
species: Archaeon Methanococcus jannaschii [TaxId: 2190]

Probab=95.17  E-value=0.01  Score=46.42  Aligned_cols=36  Identities=22%  Similarity=0.274  Sum_probs=31.9

Q ss_pred             CeEEEEcCCChhHHHHHHHHHHcC-CceEEEEecCCC
Q 017760           12 KTFLVTGGLGHVGSALCLELVRRG-AYQVRAFDLRTN   47 (366)
Q Consensus        12 ~~VlITGgtGfiG~~L~~~L~~~g-~~~V~~~dr~~~   47 (366)
                      |||.|+||+|.+|+.++..|..++ ..++..+|+++.
T Consensus         1 MKV~IiGA~G~VG~~~a~~l~~~~l~~el~L~D~~~~   37 (145)
T d1hyea1           1 MKVTIIGASGRVGSATALLLAKEPFMKDLVLIGREHS   37 (145)
T ss_dssp             CEEEEETTTSHHHHHHHHHHHTCTTCCEEEEEECGGG
T ss_pred             CEEEEECCCChHHHHHHHHHHhCCcccccccccchhh
Confidence            589999999999999999999888 358999998853

>d2g17a1 c.2.1.3 (A:1-153,A:309-334) N-acetyl-gamma-glutamyl-phosphate reductase ArgC {Salmonella typhimurium [TaxId: 90371]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Glyceraldehyde-3-phosphate dehydrogenase-like, N-terminal domain
domain: N-acetyl-gamma-glutamyl-phosphate reductase ArgC
species: Salmonella typhimurium [TaxId: 90371]

Probab=95.15  E-value=0.011  Score=47.90  Aligned_cols=33  Identities=21%  Similarity=0.262  Sum_probs=27.4

Q ss_pred             CCeEEEEcCCChhHHHHHHHHHHcCCceEEEEe
Q 017760           11 GKTFLVTGGLGHVGSALCLELVRRGAYQVRAFD   43 (366)
Q Consensus        11 ~~~VlITGgtGfiG~~L~~~L~~~g~~~V~~~d   43 (366)
                      |++|.|.|||||+|..|++.|.+....++..+.
T Consensus         1 MikVaIiGATGyvG~eLlrlL~~HP~~ei~~l~   33 (179)
T d2g17a1           1 MLNTLIVGASGYAGAELVSYVNRHPHMTITALT   33 (179)
T ss_dssp             CEEEEEETTTSHHHHHHHHHHHHCTTEEEEEEE
T ss_pred             CcEEEEECcccHHHHHHHHHHHhCCCCceEeeE
Confidence            679999999999999999999997534665553

>d1vkna1 c.2.1.3 (A:1-144,A:308-339) N-acetyl-gamma-glutamyl-phosphate reductase ArgC {Thermotoga maritima [TaxId: 2336]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Glyceraldehyde-3-phosphate dehydrogenase-like, N-terminal domain
domain: N-acetyl-gamma-glutamyl-phosphate reductase ArgC
species: Thermotoga maritima [TaxId: 2336]

Probab=95.06  E-value=0.015  Score=47.08  Aligned_cols=35  Identities=17%  Similarity=0.101  Sum_probs=28.1

Q ss_pred             CCeEEEEcCCChhHHHHHHHHHHcCCceEEEEecC
Q 017760           11 GKTFLVTGGLGHVGSALCLELVRRGAYQVRAFDLR   45 (366)
Q Consensus        11 ~~~VlITGgtGfiG~~L~~~L~~~g~~~V~~~dr~   45 (366)
                      |+||.|.||||++|..|++.|.+...-++..+.-+
T Consensus         1 MikVaIvGATGyvG~eLirlL~~HP~~ei~~l~s~   35 (176)
T d1vkna1           1 MIRAGIIGATGYTGLELVRLLKNHPEAKITYLSSR   35 (176)
T ss_dssp             CEEEEEESTTSHHHHHHHHHHHHCTTEEEEEEECS
T ss_pred             CeEEEEECCCcHHHHHHHHHHHhCCCceEEEeecc
Confidence            57999999999999999999998653466666433

>d2f1ka2 c.2.1.6 (A:1-165) Prephenate dehydrogenase TyrA {Synechocystis sp. pcc 6803 [TaxId: 1148]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: 6-phosphogluconate dehydrogenase-like, N-terminal domain
domain: Prephenate dehydrogenase TyrA
species: Synechocystis sp. pcc 6803 [TaxId: 1148]

Probab=95.04  E-value=0.012  Score=46.84  Aligned_cols=33  Identities=30%  Similarity=0.431  Sum_probs=29.5

Q ss_pred             CeEEEEcCCChhHHHHHHHHHHcCCceEEEEecCC
Q 017760           12 KTFLVTGGLGHVGSALCLELVRRGAYQVRAFDLRT   46 (366)
Q Consensus        12 ~~VlITGgtGfiG~~L~~~L~~~g~~~V~~~dr~~   46 (366)
                      |||.|. |.|.+|+.+++.|.+.| ++|.++||++
T Consensus         1 MkI~iI-G~G~mG~~lA~~l~~~g-~~V~~~d~~~   33 (165)
T d2f1ka2           1 MKIGVV-GLGLIGASLAGDLRRRG-HYLIGVSRQQ   33 (165)
T ss_dssp             CEEEEE-CCSHHHHHHHHHHHHTT-CEEEEECSCH
T ss_pred             CEEEEE-eecHHHHHHHHHHHHCC-CEEEEEECCc
Confidence            579998 56999999999999999 5999999875

>d1e7wa_ c.2.1.2 (A:) Dihydropteridin reductase (pteridine reductase) {Leishmania major [TaxId: 5664]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Tyrosine-dependent oxidoreductases
domain: Dihydropteridin reductase (pteridine reductase)
species: Leishmania major [TaxId: 5664]

Probab=94.97  E-value=0.011  Score=51.13  Aligned_cols=54  Identities=19%  Similarity=0.119  Sum_probs=38.9

Q ss_pred             CCeEEEEcCCChhHHHHHHHHHHcCCceEEEEecCCCCccc------ccccCCCeEEEEcc
Q 017760           11 GKTFLVTGGLGHVGSALCLELVRRGAYQVRAFDLRTNSPWS------HLLINHGVHCIQGL   65 (366)
Q Consensus        11 ~~~VlITGgtGfiG~~L~~~L~~~g~~~V~~~dr~~~~~~~------~~~~~~~v~~i~gD   65 (366)
                      +..++||||++-||+++++.|.+.|+ +|++.++++.....      ....+.....+++|
T Consensus         2 ~pVAlITGas~GIG~aiA~~la~~Ga-~V~i~~~~~~~~~~~~~~~l~~~~~~~~~~~~~d   61 (284)
T d1e7wa_           2 VPVALVTGAAKRLGRSIAEGLHAEGY-AVCLHYHRSAAEANALSATLNARRPNSAITVQAD   61 (284)
T ss_dssp             CCEEEETTCSSHHHHHHHHHHHHTTC-EEEEEESSCHHHHHHHHHHHHHHSTTCEEEEECC
T ss_pred             CCEEEEeCCCCHHHHHHHHHHHHcCC-EEEEEeCCCHHHHHHHHHHHHhhcCCceEEEEee
Confidence            35679999999999999999999996 89998877532211      11123455666666

>d1n1ea2 c.2.1.6 (A:9-197) Glycerol-3- phosphate dehydrogenase {Trypanosome (Leishmania mexicana) [TaxId: 5665]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: 6-phosphogluconate dehydrogenase-like, N-terminal domain
domain: Glycerol-3- phosphate dehydrogenase
species: Trypanosome (Leishmania mexicana) [TaxId: 5665]

Probab=94.97  E-value=0.0085  Score=49.14  Aligned_cols=39  Identities=23%  Similarity=0.340  Sum_probs=33.9

Q ss_pred             cccccCCeEEEEcCCChhHHHHHHHHHHcCCceEEEEecCC
Q 017760            6 NEGIEGKTFLVTGGLGHVGSALCLELVRRGAYQVRAFDLRT   46 (366)
Q Consensus         6 ~~~~~~~~VlITGgtGfiG~~L~~~L~~~g~~~V~~~dr~~   46 (366)
                      +++|.|+||.|. |+|-.|++++..|.+.| |+|++.+|++
T Consensus         2 ~~~~~m~KI~Vi-GaG~wGtAlA~~La~~g-~~V~l~~r~~   40 (189)
T d1n1ea2           2 DELLYLNKAVVF-GSGAFGTALAMVLSKKC-REVCVWHMNE   40 (189)
T ss_dssp             CCCCCEEEEEEE-CCSHHHHHHHHHHHTTE-EEEEEECSCH
T ss_pred             CccceeceEEEE-CCCHHHHHHHHHHHHcC-CeEEEEEecH
Confidence            456778899999 77999999999999999 7999998764

>d2jfga1 c.5.1.1 (A:1-93) UDP-N-acetylmuramoyl-L-alanine:D-glutamate ligase MurD {Escherichia coli [TaxId: 562]}

class: Alpha and beta proteins (a/b)
fold: MurCD N-terminal domain
superfamily: MurCD N-terminal domain
family: MurCD N-terminal domain
domain: UDP-N-acetylmuramoyl-L-alanine:D-glutamate ligase MurD
species: Escherichia coli [TaxId: 562]

Probab=94.96  E-value=0.015  Score=41.68  Aligned_cols=71  Identities=21%  Similarity=0.229  Sum_probs=48.4

Q ss_pred             ccCCeEEEEcCCChhHHHHHHHHHHcCCceEEEEecCCCCcccccccCCCeEEEEcc-ccCCCCCceEEEEeCCc
Q 017760            9 IEGKTFLVTGGLGHVGSALCLELVRRGAYQVRAFDLRTNSPWSHLLINHGVHCIQGL-RKNNRKCLYTCAVRPAA   82 (366)
Q Consensus         9 ~~~~~VlITGgtGfiG~~L~~~L~~~g~~~V~~~dr~~~~~~~~~~~~~~v~~i~gD-ks~~~~~l~~~ilRp~~   82 (366)
                      .++++|+|.|. |--|..+++.|.+.|. +|++.|.+........+. ..+.+..++ ....-.+++.+++=|+.
T Consensus         3 ~~~K~v~ViGl-G~sG~s~a~~L~~~g~-~v~~~D~~~~~~~~~~~~-~~~~~~~~~~~~~~~~~~d~vi~SPGi   74 (93)
T d2jfga1           3 YQGKNVVIIGL-GLTGLSCVDFFLARGV-TPRVMDTRMTPPGLDKLP-EAVERHTGSLNDEWLMAADLIVASPGI   74 (93)
T ss_dssp             CTTCCEEEECC-SHHHHHHHHHHHHTTC-CCEEEESSSSCTTGGGSC-TTSCEEESBCCHHHHHHCSEEEECTTS
T ss_pred             cCCCEEEEEeE-CHHHHHHHHHHHHCCC-EEEEeeCCcCchhHHHHh-hccceeecccchhhhccCCEEEECCCC
Confidence            35689999965 7789999999999995 899999887655443333 344555543 11112355677777754

>d2hjsa1 c.2.1.3 (A:3-129,A:320-336) Usg-1 protein homolog PA3116 {Pseudomonas aeruginosa [TaxId: 287]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Glyceraldehyde-3-phosphate dehydrogenase-like, N-terminal domain
domain: Usg-1 protein homolog PA3116
species: Pseudomonas aeruginosa [TaxId: 287]

Probab=94.95  E-value=0.02  Score=44.70  Aligned_cols=37  Identities=24%  Similarity=0.237  Sum_probs=28.4

Q ss_pred             CCeEEEEcCCChhHHHHHHHHHHcC--CceEEEEecCCC
Q 017760           11 GKTFLVTGGLGHVGSALCLELVRRG--AYQVRAFDLRTN   47 (366)
Q Consensus        11 ~~~VlITGgtGfiG~~L~~~L~~~g--~~~V~~~dr~~~   47 (366)
                      .++|.|.||||++|+.+++.|.+++  ..++..+..+..
T Consensus         2 ~mnVaIvGATGyvG~eli~lL~~~~hP~~~l~~~~s~~~   40 (144)
T d2hjsa1           2 PLNVAVVGATGSVGEALVGLLDERDFPLHRLHLLASAES   40 (144)
T ss_dssp             CCCEEEETTTSHHHHHHHHHHHHTTCCCSCEEEEECTTT
T ss_pred             CCEEEEECCCCHHHHHHHHHHHhcCCCceEEEEEeeccc
Confidence            4789999999999999999997654  236766654443

>d1jtva_ c.2.1.2 (A:) Human estrogenic 17beta-hydroxysteroid dehydrogenase {Human (Homo sapiens) [TaxId: 9606]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Tyrosine-dependent oxidoreductases
domain: Human estrogenic 17beta-hydroxysteroid dehydrogenase
species: Human (Homo sapiens) [TaxId: 9606]

Probab=94.80  E-value=0.012  Score=51.49  Aligned_cols=53  Identities=15%  Similarity=0.040  Sum_probs=36.5

Q ss_pred             CeEEEEcCCChhHHHHHHHHHHcCCceEEEEecCCCCcc-cc---------cccCCCeEEEEcc
Q 017760           12 KTFLVTGGLGHVGSALCLELVRRGAYQVRAFDLRTNSPW-SH---------LLINHGVHCIQGL   65 (366)
Q Consensus        12 ~~VlITGgtGfiG~~L~~~L~~~g~~~V~~~dr~~~~~~-~~---------~~~~~~v~~i~gD   65 (366)
                      +-|+||||++-||.++++.|.+.|. +|+.+++...... ..         .....++..+.+|
T Consensus         3 kVvlITGassGIG~a~A~~la~~Ga-~v~~v~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~D   65 (285)
T d1jtva_           3 TVVLITGCSSGIGLHLAVRLASDPS-QSFKVYATLRDLKTQGRLWEAARALACPPGSLETLQLD   65 (285)
T ss_dssp             EEEEESCCSSHHHHHHHHHHHTCTT-CCEEEEEEESCGGGTHHHHHHHHHTTCCTTSEEEEECC
T ss_pred             CEEEEccCCCHHHHHHHHHHHHCCC-CeEEEEEecCChhhhHHHHHHHHHHhccCCceEEEecc
Confidence            4468999999999999999999995 6655544321111 00         1124578899999

>d1ez4a1 c.2.1.5 (A:16-162) Lactate dehydrogenase {Lactobacillus pentosus [TaxId: 1589]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: LDH N-terminal domain-like
domain: Lactate dehydrogenase
species: Lactobacillus pentosus [TaxId: 1589]

Probab=94.79  E-value=0.017  Score=45.20  Aligned_cols=37  Identities=22%  Similarity=0.419  Sum_probs=31.8

Q ss_pred             ccCCeEEEEcCCChhHHHHHHHHHHcC-CceEEEEecCC
Q 017760            9 IEGKTFLVTGGLGHVGSALCLELVRRG-AYQVRAFDLRT   46 (366)
Q Consensus         9 ~~~~~VlITGgtGfiG~~L~~~L~~~g-~~~V~~~dr~~   46 (366)
                      .+.+||.|.|+ |++|+.++..|..+| ..+|+++|+++
T Consensus         3 ~~~~KI~IIGa-G~VG~~~A~~l~~~~~~~elvL~D~~~   40 (146)
T d1ez4a1           3 PNHQKVVLVGD-GAVGSSYAFAMAQQGIAEEFVIVDVVK   40 (146)
T ss_dssp             TTBCEEEEECC-SHHHHHHHHHHHHHTCCSEEEEECSSH
T ss_pred             CCCCEEEEECC-CHHHHHHHHHHHhcCCCcEEEEeeccc
Confidence            45679999985 999999999999987 35899999876

>d2cvoa1 c.2.1.3 (A:68-218,A:384-415) Putative semialdehyde dehydrogenase {Rice (Oryza sativa) [TaxId: 4530]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Glyceraldehyde-3-phosphate dehydrogenase-like, N-terminal domain
domain: Putative semialdehyde dehydrogenase
species: Rice (Oryza sativa) [TaxId: 4530]

Probab=94.66  E-value=0.019  Score=46.61  Aligned_cols=36  Identities=17%  Similarity=0.273  Sum_probs=29.0

Q ss_pred             ccCCeEEEEcCCChhHHHHHHHHHHcCCceEEEEec
Q 017760            9 IEGKTFLVTGGLGHVGSALCLELVRRGAYQVRAFDL   44 (366)
Q Consensus         9 ~~~~~VlITGgtGfiG~~L~~~L~~~g~~~V~~~dr   44 (366)
                      .++.||.|.||||++|+.|++.|.+.-.-++..+.-
T Consensus         3 ~~kikVaIlGATGyvG~elirLL~~HP~~ei~~l~S   38 (183)
T d2cvoa1           3 GEEVRIAVLGASGYTGAEIVRLLANHPQFRIKVMTA   38 (183)
T ss_dssp             SSCEEEEEESCSSHHHHHHHHHHTTCSSEEEEEEEC
T ss_pred             CCccEEEEECcccHHHHHHHHHHHhCCCceEEEEec
Confidence            356789999999999999999999976446665543

>d1pzga1 c.2.1.5 (A:14-163) Lactate dehydrogenase {Toxoplasma gondii [TaxId: 5811]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: LDH N-terminal domain-like
domain: Lactate dehydrogenase
species: Toxoplasma gondii [TaxId: 5811]

Probab=94.59  E-value=0.025  Score=44.64  Aligned_cols=38  Identities=18%  Similarity=0.263  Sum_probs=32.5

Q ss_pred             ccCCeEEEEcCCChhHHHHHHHHHHcCCceEEEEecCCC
Q 017760            9 IEGKTFLVTGGLGHVGSALCLELVRRGAYQVRAFDLRTN   47 (366)
Q Consensus         9 ~~~~~VlITGgtGfiG~~L~~~L~~~g~~~V~~~dr~~~   47 (366)
                      .+.+||.|.|+ |.+|+.++..|...+..++.++|+++.
T Consensus         5 ~k~~KI~IIGa-G~VG~~lA~~l~~~~~~el~L~D~~~~   42 (154)
T d1pzga1           5 QRRKKVAMIGS-GMIGGTMGYLCALRELADVVLYDVVKG   42 (154)
T ss_dssp             SCCCEEEEECC-SHHHHHHHHHHHHHTCCEEEEECSSSS
T ss_pred             cCCCcEEEECC-CHHHHHHHHHHHhCCCceEEEEEeccc
Confidence            45689999986 999999999888888668999998864

>d1mlda1 c.2.1.5 (A:1-144) Malate dehydrogenase {Pig (Sus scrofa) [TaxId: 9823]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: LDH N-terminal domain-like
domain: Malate dehydrogenase
species: Pig (Sus scrofa) [TaxId: 9823]

Probab=94.46  E-value=0.023  Score=44.30  Aligned_cols=35  Identities=23%  Similarity=0.369  Sum_probs=31.0

Q ss_pred             eEEEEcCCChhHHHHHHHHHHcCC-ceEEEEecCCC
Q 017760           13 TFLVTGGLGHVGSALCLELVRRGA-YQVRAFDLRTN   47 (366)
Q Consensus        13 ~VlITGgtGfiG~~L~~~L~~~g~-~~V~~~dr~~~   47 (366)
                      ||.|+||+|.+|++++..|..+|. .+++.+|.++.
T Consensus         2 Kv~IiGA~G~VG~~~A~~l~~~~~~~elvLiDi~~~   37 (144)
T d1mlda1           2 KVAVLGASGGIGQPLSLLLKNSPLVSRLTLYDIAHT   37 (144)
T ss_dssp             EEEEETTTSTTHHHHHHHHHTCTTCSEEEEEESSSH
T ss_pred             eEEEECCCChHHHHHHHHHHhCCccceEEEEecccc
Confidence            799999999999999999998874 68999998653

>d1mb4a1 c.2.1.3 (A:1-132,A:355-369) Aspartate beta-semialdehyde dehydrogenase {Vibrio cholerae [TaxId: 666]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Glyceraldehyde-3-phosphate dehydrogenase-like, N-terminal domain
domain: Aspartate beta-semialdehyde dehydrogenase
species: Vibrio cholerae [TaxId: 666]

Probab=94.36  E-value=0.049  Score=42.47  Aligned_cols=34  Identities=24%  Similarity=0.212  Sum_probs=25.5

Q ss_pred             CeEEEEcCCChhHHHHHHHHHHcC---CceEEEEecC
Q 017760           12 KTFLVTGGLGHVGSALCLELVRRG---AYQVRAFDLR   45 (366)
Q Consensus        12 ~~VlITGgtGfiG~~L~~~L~~~g---~~~V~~~dr~   45 (366)
                      |||.|.||||++|+.|++.|++..   .-++..+.-+
T Consensus         1 mKVaIiGATGyvG~eLi~lLl~~~~~p~~~i~~~ss~   37 (147)
T d1mb4a1           1 MRVGLVGWRGMVGSVLMQRMVEERDFDLIEPVFFSTS   37 (147)
T ss_dssp             CEEEEESCSSHHHHHHHHHHHHTTGGGGSEEEEEESS
T ss_pred             CEEEEECCccHHHHHHHHHHHhcCCCCceEEEEeccc
Confidence            589999999999999999888643   1245555433

>d1mv8a2 c.2.1.6 (A:1-202) GDP-mannose 6-dehydrogenase {Pseudomonas aeruginosa [TaxId: 287]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: 6-phosphogluconate dehydrogenase-like, N-terminal domain
domain: GDP-mannose 6-dehydrogenase
species: Pseudomonas aeruginosa [TaxId: 287]

Probab=94.13  E-value=0.025  Score=46.61  Aligned_cols=33  Identities=30%  Similarity=0.391  Sum_probs=30.0

Q ss_pred             CeEEEEcCCChhHHHHHHHHHHcCCceEEEEecCC
Q 017760           12 KTFLVTGGLGHVGSALCLELVRRGAYQVRAFDLRT   46 (366)
Q Consensus        12 ~~VlITGgtGfiG~~L~~~L~~~g~~~V~~~dr~~   46 (366)
                      |+|.|. |.||+|..++..|.++| ++|+++|.++
T Consensus         1 MkI~Vi-GlG~vGl~~a~~la~~g-~~V~g~D~n~   33 (202)
T d1mv8a2           1 MRISIF-GLGYVGAVCAGCLSARG-HEVIGVDVSS   33 (202)
T ss_dssp             CEEEEE-CCSTTHHHHHHHHHHTT-CEEEEECSCH
T ss_pred             CEEEEE-CCCHhHHHHHHHHHhCC-CcEEEEeCCH
Confidence            578888 89999999999999999 5999999764

>d1f0ya2 c.2.1.6 (A:12-203) Short chain L-3-hydroxyacyl CoA dehydrogenase {Human (Homo sapiens) [TaxId: 9606]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: 6-phosphogluconate dehydrogenase-like, N-terminal domain
domain: Short chain L-3-hydroxyacyl CoA dehydrogenase
species: Human (Homo sapiens) [TaxId: 9606]

Probab=94.13  E-value=0.024  Score=46.46  Aligned_cols=37  Identities=27%  Similarity=0.342  Sum_probs=32.1

Q ss_pred             ccCCeEEEEcCCChhHHHHHHHHHHcCCceEEEEecCCC
Q 017760            9 IEGKTFLVTGGLGHVGSALCLELVRRGAYQVRAFDLRTN   47 (366)
Q Consensus         9 ~~~~~VlITGgtGfiG~~L~~~L~~~g~~~V~~~dr~~~   47 (366)
                      |.-++|.|.|+ |.+|+.++..++..| ++|+++|+++.
T Consensus         2 ~~IkkvaViGa-G~mG~~iA~~~a~~G-~~V~l~D~~~~   38 (192)
T d1f0ya2           2 IIVKHVTVIGG-GLMGAGIAQVAAATG-HTVVLVDQTED   38 (192)
T ss_dssp             CCCCEEEEECC-SHHHHHHHHHHHHTT-CEEEEECSCHH
T ss_pred             ceeEEEEEECc-CHHHHHHHHHHHhCC-CcEEEEECChH
Confidence            34579999966 999999999999999 59999998863

>d1pjqa1 c.2.1.11 (A:1-113) Siroheme synthase CysG, domain 1 {Salmonella typhimurium [TaxId: 90371]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Siroheme synthase N-terminal domain-like
domain: Siroheme synthase CysG, domain 1
species: Salmonella typhimurium [TaxId: 90371]

Probab=94.02  E-value=0.043  Score=40.57  Aligned_cols=56  Identities=16%  Similarity=0.202  Sum_probs=40.5

Q ss_pred             ccccCCeEEEEcCCChhHHHHHHHHHHcCCceEEEEecCCCCcccccccCCCeEEEEc
Q 017760            7 EGIEGKTFLVTGGLGHVGSALCLELVRRGAYQVRAFDLRTNSPWSHLLINHGVHCIQG   64 (366)
Q Consensus         7 ~~~~~~~VlITGgtGfiG~~L~~~L~~~g~~~V~~~dr~~~~~~~~~~~~~~v~~i~g   64 (366)
                      -..++++|+|. |+|-+|.+-++.|++.|. +|+.++....++........+++.++.
T Consensus         8 l~l~~k~vlVv-G~G~va~~ka~~ll~~ga-~v~v~~~~~~~~~~~~~~~~~i~~~~~   63 (113)
T d1pjqa1           8 CQLRDRDCLIV-GGGDVAERKARLLLEAGA-RLTVNALTFIPQFTVWANEGMLTLVEG   63 (113)
T ss_dssp             ECCBTCEEEEE-CCSHHHHHHHHHHHHTTB-EEEEEESSCCHHHHHHHTTTSCEEEES
T ss_pred             EEeCCCEEEEE-CCCHHHHHHHHHHHHCCC-eEEEEeccCChHHHHHHhcCCceeecc
Confidence            34678999999 678899999999999996 899998665543322223345666654

>d1guza1 c.2.1.5 (A:1-142) Malate dehydrogenase {Chlorobium vibrioforme [TaxId: 1098]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: LDH N-terminal domain-like
domain: Malate dehydrogenase
species: Chlorobium vibrioforme [TaxId: 1098]

Probab=94.00  E-value=0.034  Score=43.04  Aligned_cols=37  Identities=24%  Similarity=0.443  Sum_probs=31.5

Q ss_pred             CeEEEEcCCChhHHHHHHHHHHcC-CceEEEEecCCCCc
Q 017760           12 KTFLVTGGLGHVGSALCLELVRRG-AYQVRAFDLRTNSP   49 (366)
Q Consensus        12 ~~VlITGgtGfiG~~L~~~L~~~g-~~~V~~~dr~~~~~   49 (366)
                      |||.|+|+ |.+|+.++..|...+ ..++.++|+++...
T Consensus         1 mKI~IIGa-G~VG~~la~~l~~~~l~~el~L~Di~~~~~   38 (142)
T d1guza1           1 MKITVIGA-GNVGATTAFRLAEKQLARELVLLDVVEGIP   38 (142)
T ss_dssp             CEEEEECC-SHHHHHHHHHHHHTTCCSEEEEECSSSSHH
T ss_pred             CEEEEECc-CHHHHHHHHHHHhCCCCceEEEeccccccc
Confidence            58999985 999999999999987 36899999987543

>d1bg6a2 c.2.1.6 (A:4-187) N-(1-D-carboxylethyl)-L-norvaline dehydrogenase {Arthrobacter, strain 1c [TaxId: 1663]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: 6-phosphogluconate dehydrogenase-like, N-terminal domain
domain: N-(1-D-carboxylethyl)-L-norvaline dehydrogenase
species: Arthrobacter, strain 1c [TaxId: 1663]

Probab=93.99  E-value=0.024  Score=45.44  Aligned_cols=33  Identities=36%  Similarity=0.511  Sum_probs=30.0

Q ss_pred             CeEEEEcCCChhHHHHHHHHHHcCCceEEEEecCC
Q 017760           12 KTFLVTGGLGHVGSALCLELVRRGAYQVRAFDLRT   46 (366)
Q Consensus        12 ~~VlITGgtGfiG~~L~~~L~~~g~~~V~~~dr~~   46 (366)
                      +||.|.|+ |.+|..++..|.++| |+|.+++|++
T Consensus         2 k~iaIiGa-G~~G~~~A~~l~~~G-~~V~~~~r~~   34 (184)
T d1bg6a2           2 KTYAVLGL-GNGGHAFAAYLALKG-QSVLAWDIDA   34 (184)
T ss_dssp             CEEEEECC-SHHHHHHHHHHHHTT-CEEEEECSCH
T ss_pred             CEEEEECc-cHHHHHHHHHHHHCC-CEEEEEECCH
Confidence            78999965 999999999999999 6999999875

>d3cuma2 c.2.1.6 (A:1-162) Hydroxyisobutyrate dehydrogenase {Pseudomonas aeruginosa [TaxId: 287]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: 6-phosphogluconate dehydrogenase-like, N-terminal domain
domain: Hydroxyisobutyrate dehydrogenase
species: Pseudomonas aeruginosa [TaxId: 287]

Probab=93.94  E-value=0.032  Score=44.17  Aligned_cols=35  Identities=34%  Similarity=0.688  Sum_probs=31.2

Q ss_pred             CCeEEEEcCCChhHHHHHHHHHHcCCceEEEEecCCC
Q 017760           11 GKTFLVTGGLGHVGSALCLELVRRGAYQVRAFDLRTN   47 (366)
Q Consensus        11 ~~~VlITGgtGfiG~~L~~~L~~~g~~~V~~~dr~~~   47 (366)
                      |++|.+. |.|.+|+++++.|+++| ++|.+.||++.
T Consensus         1 M~kIg~I-GlG~MG~~iA~~L~~~g-~~v~~~d~~~~   35 (162)
T d3cuma2           1 MKQIAFI-GLGHMGAPMATNLLKAG-YLLNVFDLVQS   35 (162)
T ss_dssp             CCEEEEE-CCSTTHHHHHHHHHHTT-CEEEEECSSHH
T ss_pred             CCEEEEE-EEHHHHHHHHHHHHHCC-CeEEEEECchh
Confidence            5789888 88999999999999999 59999998754

>d2cmda1 c.2.1.5 (A:1-145) Malate dehydrogenase {Escherichia coli [TaxId: 562]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: LDH N-terminal domain-like
domain: Malate dehydrogenase
species: Escherichia coli [TaxId: 562]

Probab=93.83  E-value=0.035  Score=43.22  Aligned_cols=35  Identities=26%  Similarity=0.416  Sum_probs=28.8

Q ss_pred             CeEEEEcCCChhHHHHHHHHHHc-C-CceEEEEecCC
Q 017760           12 KTFLVTGGLGHVGSALCLELVRR-G-AYQVRAFDLRT   46 (366)
Q Consensus        12 ~~VlITGgtGfiG~~L~~~L~~~-g-~~~V~~~dr~~   46 (366)
                      |||.|+|++|.+|++++..|..+ + ..++..+|..+
T Consensus         1 MKV~IiGaaG~VG~~~a~~l~~~~~~~~el~L~D~~~   37 (145)
T d2cmda1           1 MKVAVLGAAGGIGQALALLLKTQLPSGSELSLYDIAP   37 (145)
T ss_dssp             CEEEEETTTSHHHHHHHHHHHHHSCTTCEEEEECSST
T ss_pred             CEEEEEcCCChHHHHHHHHHHhCCCCCcEEEEecccc
Confidence            68999999999999999887643 3 36899999754

>d2g5ca2 c.2.1.6 (A:30-200) Prephenate dehydrogenase TyrA {Aquifex aeolicus [TaxId: 63363]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: 6-phosphogluconate dehydrogenase-like, N-terminal domain
domain: Prephenate dehydrogenase TyrA
species: Aquifex aeolicus [TaxId: 63363]

Probab=93.60  E-value=0.041  Score=43.64  Aligned_cols=36  Identities=22%  Similarity=0.509  Sum_probs=30.2

Q ss_pred             CCeEEEEcCCChhHHHHHHHHHHcCC-ceEEEEecCCC
Q 017760           11 GKTFLVTGGLGHVGSALCLELVRRGA-YQVRAFDLRTN   47 (366)
Q Consensus        11 ~~~VlITGgtGfiG~~L~~~L~~~g~-~~V~~~dr~~~   47 (366)
                      |++|+|.| .|.+|..+++.|.+.|+ .+|+++|+++.
T Consensus         1 Mk~I~IIG-~G~mG~sla~~L~~~g~~~~I~~~D~~~~   37 (171)
T d2g5ca2           1 MQNVLIVG-VGFMGGSFAKSLRRSGFKGKIYGYDINPE   37 (171)
T ss_dssp             CCEEEEES-CSHHHHHHHHHHHHTTCCSEEEEECSCHH
T ss_pred             CCEEEEEc-cCHHHHHHHHHHHhcCCCeEEEEEECChH
Confidence            56899995 79999999999999984 37888988753

>d2ldxa1 c.2.1.5 (A:1-159) Lactate dehydrogenase {Mouse (Mus musculus) [TaxId: 10090]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: LDH N-terminal domain-like
domain: Lactate dehydrogenase
species: Mouse (Mus musculus) [TaxId: 10090]

Probab=93.49  E-value=0.052  Score=42.94  Aligned_cols=40  Identities=23%  Similarity=0.374  Sum_probs=33.1

Q ss_pred             ccccCCeEEEEcCCChhHHHHHHHHHHcCC-ceEEEEecCCC
Q 017760            7 EGIEGKTFLVTGGLGHVGSALCLELVRRGA-YQVRAFDLRTN   47 (366)
Q Consensus         7 ~~~~~~~VlITGgtGfiG~~L~~~L~~~g~-~~V~~~dr~~~   47 (366)
                      ..++..||.|+|+ |.+|+.++..|..+|. .++..+|+++.
T Consensus        15 ~~~~~~KI~IIGa-G~VG~~~A~~l~~~~l~~elvL~D~~~~   55 (159)
T d2ldxa1          15 DKLSRCKITVVGV-GDVGMACAISILLKGLADELALVDADTD   55 (159)
T ss_dssp             CCCCCCEEEEECC-SHHHHHHHHHHHTTTSCSEEEEECSCHH
T ss_pred             ccCCCCeEEEECC-CHHHHHHHHHHHhcCCCCEEEEEeCCch
Confidence            3456678999985 9999999999999873 58999998753

>d1id1a_ c.2.1.9 (A:) Rck domain from putative potassium channel Kch {Escherichia coli [TaxId: 562]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Potassium channel NAD-binding domain
domain: Rck domain from putative potassium channel Kch
species: Escherichia coli [TaxId: 562]

Probab=93.48  E-value=0.029  Score=43.83  Aligned_cols=52  Identities=19%  Similarity=0.251  Sum_probs=37.6

Q ss_pred             CeEEEEcCCChhHHHHHHHHHHcCCceEEEEecCCCCcc--cccccCCCeEEEEcc
Q 017760           12 KTFLVTGGLGHVGSALCLELVRRGAYQVRAFDLRTNSPW--SHLLINHGVHCIQGL   65 (366)
Q Consensus        12 ~~VlITGgtGfiG~~L~~~L~~~g~~~V~~~dr~~~~~~--~~~~~~~~v~~i~gD   65 (366)
                      .+|+|+|. |-+|..+++.|.+.|. +|++++.++....  .......++.++.||
T Consensus         4 nHiII~G~-g~~g~~l~~~L~~~~~-~v~vId~d~~~~~~~~~~~~~~~~~vi~Gd   57 (153)
T d1id1a_           4 DHFIVCGH-SILAINTILQLNQRGQ-NVTVISNLPEDDIKQLEQRLGDNADVIPGD   57 (153)
T ss_dssp             SCEEEECC-SHHHHHHHHHHHHTTC-CEEEEECCCHHHHHHHHHHHCTTCEEEESC
T ss_pred             CEEEEECC-CHHHHHHHHHHHHcCC-CEEEEeccchhHHHHHHHhhcCCcEEEEcc
Confidence            46888865 8999999999999994 8999987653211  122334567777776

>d1ldna1 c.2.1.5 (A:15-162) Lactate dehydrogenase {Bacillus stearothermophilus [TaxId: 1422]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: LDH N-terminal domain-like
domain: Lactate dehydrogenase
species: Bacillus stearothermophilus [TaxId: 1422]

Probab=93.32  E-value=0.044  Score=42.76  Aligned_cols=37  Identities=24%  Similarity=0.499  Sum_probs=31.5

Q ss_pred             cCCeEEEEcCCChhHHHHHHHHHHcCC-ceEEEEecCCC
Q 017760           10 EGKTFLVTGGLGHVGSALCLELVRRGA-YQVRAFDLRTN   47 (366)
Q Consensus        10 ~~~~VlITGgtGfiG~~L~~~L~~~g~-~~V~~~dr~~~   47 (366)
                      .+.||.|+|+ |++|+.++..|..+|. .++..+|+++.
T Consensus         5 ~~~KI~IiGa-G~vG~~~a~~l~~~~l~~el~L~Di~~~   42 (148)
T d1ldna1           5 GGARVVVIGA-GFVGASYVFALMNQGIADEIVLIDANES   42 (148)
T ss_dssp             TSCEEEEECC-SHHHHHHHHHHHHHTCCSEEEEECSSHH
T ss_pred             CCCeEEEECc-CHHHHHHHHHHHhcCCCceEEEEeeccc
Confidence            4578999986 9999999999999873 58999998764

>d2gz1a1 c.2.1.3 (A:2-127,A:330-357) Aspartate beta-semialdehyde dehydrogenase {Streptococcus pneumoniae [TaxId: 1313]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Glyceraldehyde-3-phosphate dehydrogenase-like, N-terminal domain
domain: Aspartate beta-semialdehyde dehydrogenase
species: Streptococcus pneumoniae [TaxId: 1313]

Probab=93.16  E-value=0.053  Score=42.54  Aligned_cols=32  Identities=25%  Similarity=0.302  Sum_probs=24.8

Q ss_pred             CeEEEEcCCChhHHHHHHHHHHcCC--ceEEEEe
Q 017760           12 KTFLVTGGLGHVGSALCLELVRRGA--YQVRAFD   43 (366)
Q Consensus        12 ~~VlITGgtGfiG~~L~~~L~~~g~--~~V~~~d   43 (366)
                      -+|.|.|||||+|..|++.|.+..+  .++..+.
T Consensus         2 ~kVaIvGATGyvG~eLirlL~~H~fp~~~l~~~~   35 (154)
T d2gz1a1           2 YTVAVVGATGAVGAQMIKMLEESTLPIDKIRYLA   35 (154)
T ss_dssp             EEEEEETTTSHHHHHHHHHHHTCCSCEEEEEEEE
T ss_pred             CEEEEECCCcHHHHHHHHHHHcCCCCceEEEEec
Confidence            3799999999999999999988742  2444443

>d1p3da1 c.5.1.1 (A:11-106) UDP-N-acetylmuramate-alanine ligase MurC {Haemophilus influenzae [TaxId: 727]}

class: Alpha and beta proteins (a/b)
fold: MurCD N-terminal domain
superfamily: MurCD N-terminal domain
family: MurCD N-terminal domain
domain: UDP-N-acetylmuramate-alanine ligase MurC
species: Haemophilus influenzae [TaxId: 727]

Probab=92.92  E-value=0.21  Score=35.66  Aligned_cols=89  Identities=13%  Similarity=0.100  Sum_probs=55.8

Q ss_pred             cccCCeEEEEcCCChhHHHHHHHHHHcCCceEEEEecCCCCcccccccCCCeEEEEccccCCCCCceEEEEeCCccccCC
Q 017760            8 GIEGKTFLVTGGLGHVGSALCLELVRRGAYQVRAFDLRTNSPWSHLLINHGVHCIQGLRKNNRKCLYTCAVRPAAIYGPG   87 (366)
Q Consensus         8 ~~~~~~VlITGgtGfiG~~L~~~L~~~g~~~V~~~dr~~~~~~~~~~~~~~v~~i~gDks~~~~~l~~~ilRp~~iyGp~   87 (366)
                      +...++|.+.|-.|--=++||+.|.++|+ +|.+.|+..++ ....+...++++..++....-.+.+.+      ||++.
T Consensus         5 ~~~~~~ihfiGigG~GMs~LA~~L~~~G~-~VsGSD~~~~~-~~~~L~~~Gi~v~~g~~~~~i~~~d~v------V~S~A   76 (96)
T d1p3da1           5 MRRVQQIHFIGIGGAGMSGIAEILLNEGY-QISGSDIADGV-VTQRLAQAGAKIYIGHAEEHIEGASVV------VVSSA   76 (96)
T ss_dssp             CTTCCEEEEETTTSTTHHHHHHHHHHHTC-EEEEEESCCSH-HHHHHHHTTCEEEESCCGGGGTTCSEE------EECTT
T ss_pred             chhCCEEEEEEECHHHHHHHHHHHHhCCC-EEEEEeCCCCh-hhhHHHHCCCeEEECCccccCCCCCEE------EECCC
Confidence            34567898887766555889999999995 99999988543 334555678888887633222333332      34443


Q ss_pred             CCCCHHHHHHHHHcCCC
Q 017760           88 EERHLPRIVSLAKLGLV  104 (366)
Q Consensus        88 ~~~~l~~~i~~~~~g~~  104 (366)
                      -...-+.+..+.++|.+
T Consensus        77 I~~~npel~~A~~~gip   93 (96)
T d1p3da1          77 IKDDNPELVTSKQKRIP   93 (96)
T ss_dssp             SCTTCHHHHHHHHTTCC
T ss_pred             cCCCCHHHHHHHHcCCC
Confidence            22223555555566654

>d1tt7a2 c.2.1.1 (A:128-294) Hypothetical protein YhfP {Bacillus subtilis [TaxId: 1423]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Alcohol dehydrogenase-like, C-terminal domain
domain: Hypothetical protein YhfP
species: Bacillus subtilis [TaxId: 1423]

Probab=92.83  E-value=0.057  Score=42.98  Aligned_cols=38  Identities=34%  Similarity=0.365  Sum_probs=33.3

Q ss_pred             cCCeEEEEcCCChhHHHHHHHHHHcCCceEEEEecCCCC
Q 017760           10 EGKTFLVTGGLGHVGSALCLELVRRGAYQVRAFDLRTNS   48 (366)
Q Consensus        10 ~~~~VlITGgtGfiG~~L~~~L~~~g~~~V~~~dr~~~~   48 (366)
                      ++.+|||+||+|-+|...++.....|. +|+++.+++.+
T Consensus        23 ~~~~VLV~gaaGgVG~~avQlAk~~Ga-~Viat~~s~~k   60 (167)
T d1tt7a2          23 EKGSVLVTGATGGVGGIAVSMLNKRGY-DVVASTGNREA   60 (167)
T ss_dssp             GGCCEEEESTTSHHHHHHHHHHHHHTC-CEEEEESSSST
T ss_pred             CCCEEEEeCCcchHHHHHHHHHHHcCC-ceEEEecCHHH
Confidence            356799999999999999999999996 89999887654

>d1yb5a2 c.2.1.1 (A:121-294) Quinone oxidoreductase {Human (Homo sapiens) [TaxId: 9606]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Alcohol dehydrogenase-like, C-terminal domain
domain: Quinone oxidoreductase
species: Human (Homo sapiens) [TaxId: 9606]

Probab=92.65  E-value=0.063  Score=42.70  Aligned_cols=36  Identities=28%  Similarity=0.358  Sum_probs=32.1

Q ss_pred             cCCeEEEEcCCChhHHHHHHHHHHcCCceEEEEecCC
Q 017760           10 EGKTFLVTGGLGHVGSALCLELVRRGAYQVRAFDLRT   46 (366)
Q Consensus        10 ~~~~VlITGgtGfiG~~L~~~L~~~g~~~V~~~dr~~   46 (366)
                      ++.+|+|+||+|-+|...++.+...|. +|+++++++
T Consensus        28 ~g~~VlV~Ga~G~vG~~aiq~a~~~G~-~vi~~~~~~   63 (174)
T d1yb5a2          28 AGESVLVHGASGGVGLAACQIARAYGL-KILGTAGTE   63 (174)
T ss_dssp             TTCEEEEETCSSHHHHHHHHHHHHTTC-EEEEEESSH
T ss_pred             CCCEEEEEeccccccccccccccccCc-ccccccccc
Confidence            568999999999999999999999996 899998654

>d1xa0a2 c.2.1.1 (A:119-294) B. subtilis YhfP homologue {Bacillus stearothermophilus [TaxId: 1422]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Alcohol dehydrogenase-like, C-terminal domain
domain: B. subtilis YhfP homologue
species: Bacillus stearothermophilus [TaxId: 1422]

Probab=92.65  E-value=0.056  Score=43.44  Aligned_cols=38  Identities=37%  Similarity=0.408  Sum_probs=33.5

Q ss_pred             cCCeEEEEcCCChhHHHHHHHHHHcCCceEEEEecCCCC
Q 017760           10 EGKTFLVTGGLGHVGSALCLELVRRGAYQVRAFDLRTNS   48 (366)
Q Consensus        10 ~~~~VlITGgtGfiG~~L~~~L~~~g~~~V~~~dr~~~~   48 (366)
                      ++.+|||+||+|-+|+..++-....|. +|++..+++.+
T Consensus        31 ~g~~VLI~gaaGGVG~~aiQlak~~Ga-~Viat~~s~~k   68 (176)
T d1xa0a2          31 ERGPVLVTGATGGVGSLAVSMLAKRGY-TVEASTGKAAE   68 (176)
T ss_dssp             GGCCEEESSTTSHHHHHHHHHHHHTTC-CEEEEESCTTC
T ss_pred             CCCEEEEEeccchHHHHHHHHHHHcCC-ceEEecCchHH
Confidence            467899999999999999999999996 89999877654

>d1o6za1 c.2.1.5 (A:22-162) Malate dehydrogenase {Archaeon Haloarcula marismortui [TaxId: 2238]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: LDH N-terminal domain-like
domain: Malate dehydrogenase
species: Archaeon Haloarcula marismortui [TaxId: 2238]

Probab=92.65  E-value=0.065  Score=41.49  Aligned_cols=34  Identities=26%  Similarity=0.338  Sum_probs=29.8

Q ss_pred             eEEEEcCCChhHHHHHHHHHHcCC-ceEEEEecCC
Q 017760           13 TFLVTGGLGHVGSALCLELVRRGA-YQVRAFDLRT   46 (366)
Q Consensus        13 ~VlITGgtGfiG~~L~~~L~~~g~-~~V~~~dr~~   46 (366)
                      ||.|+|++|.+|+.++..|..++. .++..+|+..
T Consensus         2 KV~IiGaaG~VG~~~A~~l~~~~l~~el~L~Di~~   36 (142)
T d1o6za1           2 KVSVVGAAGTVGAAAGYNIALRDIADEVVFVDIPD   36 (142)
T ss_dssp             EEEEETTTSHHHHHHHHHHHHTTCCSEEEEECCGG
T ss_pred             eEEEECCCCcHHHHHHHHHHhCCCCCEEEEEecCC
Confidence            799999999999999999999873 5799998753

>d1vpda2 c.2.1.6 (A:3-163) Hydroxyisobutyrate dehydrogenase {Salmonella typhimurium [TaxId: 90371]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: 6-phosphogluconate dehydrogenase-like, N-terminal domain
domain: Hydroxyisobutyrate dehydrogenase
species: Salmonella typhimurium [TaxId: 90371]

Probab=92.58  E-value=0.053  Score=42.70  Aligned_cols=34  Identities=24%  Similarity=0.419  Sum_probs=30.1

Q ss_pred             CeEEEEcCCChhHHHHHHHHHHcCCceEEEEecCCC
Q 017760           12 KTFLVTGGLGHVGSALCLELVRRGAYQVRAFDLRTN   47 (366)
Q Consensus        12 ~~VlITGgtGfiG~~L~~~L~~~g~~~V~~~dr~~~   47 (366)
                      |||-|. |.|.+|+.+++.|+++| ++|++.||++.
T Consensus         1 MkIgiI-GlG~MG~~~A~~L~~~G-~~V~~~d~~~~   34 (161)
T d1vpda2           1 MKVGFI-GLGIMGKPMSKNLLKAG-YSLVVSDRNPE   34 (161)
T ss_dssp             CEEEEE-CCSTTHHHHHHHHHHTT-CEEEEECSCHH
T ss_pred             CEEEEE-ehhHHHHHHHHHHHHCC-CeEEEEeCCcc
Confidence            578888 78999999999999999 59999998764

>d1uxja1 c.2.1.5 (A:2-143) Malate dehydrogenase {Chloroflexus aurantiacus [TaxId: 1108]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: LDH N-terminal domain-like
domain: Malate dehydrogenase
species: Chloroflexus aurantiacus [TaxId: 1108]

Probab=92.55  E-value=0.075  Score=41.04  Aligned_cols=36  Identities=22%  Similarity=0.297  Sum_probs=31.0

Q ss_pred             CeEEEEcCCChhHHHHHHHHHHcCCceEEEEecCCCC
Q 017760           12 KTFLVTGGLGHVGSALCLELVRRGAYQVRAFDLRTNS   48 (366)
Q Consensus        12 ~~VlITGgtGfiG~~L~~~L~~~g~~~V~~~dr~~~~   48 (366)
                      +||.|+|+ |.+|+.++..|..++..++.++|+++..
T Consensus         2 ~KI~IIGa-G~VG~~~A~~l~~~~l~dl~l~D~~~~~   37 (142)
T d1uxja1           2 KKISIIGA-GFVGSTTAHWLAAKELGDIVLLDIVEGV   37 (142)
T ss_dssp             CEEEEECC-SHHHHHHHHHHHHHTCSEEEEECSSSSH
T ss_pred             CeEEEECC-CHHHHHHHHHHHhCCcceEEEEeecccc
Confidence            68999985 9999999999998886689999987654

>d1y7ta1 c.2.1.5 (A:0-153) Malate dehydrogenase {Thermus thermophilus [TaxId: 274]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: LDH N-terminal domain-like
domain: Malate dehydrogenase
species: Thermus thermophilus [TaxId: 274]

Probab=92.50  E-value=0.031  Score=43.94  Aligned_cols=25  Identities=24%  Similarity=0.392  Sum_probs=22.7

Q ss_pred             CCeEEEEcCCChhHHHHHHHHHHcC
Q 017760           11 GKTFLVTGGLGHVGSALCLELVRRG   35 (366)
Q Consensus        11 ~~~VlITGgtGfiG~~L~~~L~~~g   35 (366)
                      .+||.|+||+|++|++++..|...+
T Consensus         4 p~KV~IiGA~G~VG~~~a~~l~~~~   28 (154)
T d1y7ta1           4 PVRVAVTGAAGQIGYSLLFRIAAGE   28 (154)
T ss_dssp             CEEEEESSTTSHHHHHHHHHHHTTT
T ss_pred             CCEEEEECCCCHHHHHHHHHHHhcc
Confidence            4699999999999999999999875

>d1j6ua1 c.5.1.1 (A:0-88) UDP-N-acetylmuramate-alanine ligase MurC {Thermotoga maritima [TaxId: 2336]}

class: Alpha and beta proteins (a/b)
fold: MurCD N-terminal domain
superfamily: MurCD N-terminal domain
family: MurCD N-terminal domain
domain: UDP-N-acetylmuramate-alanine ligase MurC
species: Thermotoga maritima [TaxId: 2336]

Probab=92.27  E-value=0.31  Score=34.19  Aligned_cols=85  Identities=18%  Similarity=0.087  Sum_probs=54.2

Q ss_pred             CeEEEEcCCChhHHHHHHHHHHcCCceEEEEecCCCCcccccccCCCeEEEEccccCCCCCceEEEEeCCccccCCCCCC
Q 017760           12 KTFLVTGGLGHVGSALCLELVRRGAYQVRAFDLRTNSPWSHLLINHGVHCIQGLRKNNRKCLYTCAVRPAAIYGPGEERH   91 (366)
Q Consensus        12 ~~VlITGgtGfiG~~L~~~L~~~g~~~V~~~dr~~~~~~~~~~~~~~v~~i~gDks~~~~~l~~~ilRp~~iyGp~~~~~   91 (366)
                      |+|-++|-+|-==+.|++.|.++|+ +|.+.|+..+ +....+...++++..+.....-.+.+. +     ||++.-...
T Consensus         2 ~~ihfiGIgG~GMs~LA~~L~~~G~-~VsGSD~~~~-~~t~~L~~~Gi~i~~gh~~~~i~~~d~-v-----V~SsAI~~~   73 (89)
T d1j6ua1           2 MKIHFVGIGGIGMSAVALHEFSNGN-DVYGSNIEET-ERTAYLRKLGIPIFVPHSADNWYDPDL-V-----IKTPAVRDD   73 (89)
T ss_dssp             CEEEEETTTSHHHHHHHHHHHHTTC-EEEEECSSCC-HHHHHHHHTTCCEESSCCTTSCCCCSE-E-----EECTTCCTT
T ss_pred             cEEEEEeECHHHHHHHHHHHHhCCC-eEEEEeCCCC-hhHHHHHHCCCeEEeeecccccCCCCE-E-----EEecCcCCC
Confidence            6788888777666789999999995 9999998854 444567778888877642222223333 3     344432323


Q ss_pred             HHHHHHHHHcCCC
Q 017760           92 LPRIVSLAKLGLV  104 (366)
Q Consensus        92 l~~~i~~~~~g~~  104 (366)
                      -+.+..+-++|.+
T Consensus        74 npel~~A~~~gIp   86 (89)
T d1j6ua1          74 NPEIVRARMERVP   86 (89)
T ss_dssp             CHHHHHHHHTTCC
T ss_pred             CHHHHHHHHcCCC
Confidence            3556665566654

>d1y6ja1 c.2.1.5 (A:7-148) Lactate dehydrogenase {Clostridium thermocellum [TaxId: 1515]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: LDH N-terminal domain-like
domain: Lactate dehydrogenase
species: Clostridium thermocellum [TaxId: 1515]

Probab=92.25  E-value=0.086  Score=40.71  Aligned_cols=37  Identities=16%  Similarity=0.346  Sum_probs=29.6

Q ss_pred             CeEEEEcCCChhHHHHHHHHHHcCC-ceEEEEecCCCCc
Q 017760           12 KTFLVTGGLGHVGSALCLELVRRGA-YQVRAFDLRTNSP   49 (366)
Q Consensus        12 ~~VlITGgtGfiG~~L~~~L~~~g~-~~V~~~dr~~~~~   49 (366)
                      +||.|.|+ |.+|+.++..|..++. .++.++|+++...
T Consensus         2 ~KI~IIGa-G~VG~~~a~~l~~~~l~~el~L~D~~~~~~   39 (142)
T d1y6ja1           2 SKVAIIGA-GFVGASAAFTMALRQTANELVLIDVFKEKA   39 (142)
T ss_dssp             CCEEEECC-SHHHHHHHHHHHHTTCSSEEEEECCC---C
T ss_pred             CeEEEECC-CHHHHHHHHHHHhcCCCCEEEEEeccCCcc
Confidence            58999986 9999999999999873 5899999887543

>d1ojua1 c.2.1.5 (A:22-163) Malate dehydrogenase {Archaeon Archaeoglobus fulgidus [TaxId: 2234]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: LDH N-terminal domain-like
domain: Malate dehydrogenase
species: Archaeon Archaeoglobus fulgidus [TaxId: 2234]

Probab=92.08  E-value=0.082  Score=40.83  Aligned_cols=36  Identities=17%  Similarity=0.234  Sum_probs=30.3

Q ss_pred             CeEEEEcCCChhHHHHHHHHHHcC-CceEEEEecCCCC
Q 017760           12 KTFLVTGGLGHVGSALCLELVRRG-AYQVRAFDLRTNS   48 (366)
Q Consensus        12 ~~VlITGgtGfiG~~L~~~L~~~g-~~~V~~~dr~~~~   48 (366)
                      |||.|.|+ |.+|+.++..|..+| ..++.++|+++..
T Consensus         1 MKI~IIGa-G~VG~~~a~~l~~~~~~~elvL~Di~~~~   37 (142)
T d1ojua1           1 MKLGFVGA-GRVGSTSAFTCLLNLDVDEIALVDIAEDL   37 (142)
T ss_dssp             CEEEEECC-SHHHHHHHHHHHHHSCCSEEEEECSSHHH
T ss_pred             CEEEEECc-CHHHHHHHHHHHhcCcCceEEEEecccch
Confidence            68999985 999999999999877 3689999987643

>d1v3va2 c.2.1.1 (A:113-294) Leukotriene b4 12-hydroxydehydrogenase/prostaglandin 15-keto reductase {Guinea pig (Cavia porcellus) [TaxId: 10141]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Alcohol dehydrogenase-like, C-terminal domain
domain: Leukotriene b4 12-hydroxydehydrogenase/prostaglandin 15-keto reductase
species: Guinea pig (Cavia porcellus) [TaxId: 10141]

Probab=92.03  E-value=0.085  Score=42.27  Aligned_cols=37  Identities=27%  Similarity=0.278  Sum_probs=33.2

Q ss_pred             ccCCeEEEEcCCChhHHHHHHHHHHcCCceEEEEecCC
Q 017760            9 IEGKTFLVTGGLGHVGSALCLELVRRGAYQVRAFDLRT   46 (366)
Q Consensus         9 ~~~~~VlITGgtGfiG~~L~~~L~~~g~~~V~~~dr~~   46 (366)
                      .++.+|+|+||+|-+|...++.....|. +|+++++++
T Consensus        28 ~~G~~VlV~ga~ggvG~~aiqlak~~Ga-~vi~~~~~~   64 (182)
T d1v3va2          28 KGGETVLVSAAAGAVGSVVGQIAKLKGC-KVVGAAGSD   64 (182)
T ss_dssp             CSSCEEEESSTTSHHHHHHHHHHHHTTC-EEEEEESSH
T ss_pred             CCCCEEEEEeCCCchhHHHHHHHHccCC-EEEEeCCCH
Confidence            3578999999999999999999999996 899998765

>d1iz0a2 c.2.1.1 (A:99-269) Quinone oxidoreductase {Thermus thermophilus [TaxId: 274]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Alcohol dehydrogenase-like, C-terminal domain
domain: Quinone oxidoreductase
species: Thermus thermophilus [TaxId: 274]

Probab=91.97  E-value=0.08  Score=42.09  Aligned_cols=38  Identities=26%  Similarity=0.280  Sum_probs=33.1

Q ss_pred             ccCCeEEEEcCCChhHHHHHHHHHHcCCceEEEEecCCC
Q 017760            9 IEGKTFLVTGGLGHVGSALCLELVRRGAYQVRAFDLRTN   47 (366)
Q Consensus         9 ~~~~~VlITGgtGfiG~~L~~~L~~~g~~~V~~~dr~~~   47 (366)
                      .++.+|+|+||+|-+|...++.+...|. +|+++++++.
T Consensus        26 ~~g~~VlI~ga~G~vG~~aiqlak~~G~-~vi~~~~~~~   63 (171)
T d1iz0a2          26 RPGEKVLVQAAAGALGTAAVQVARAMGL-RVLAAASRPE   63 (171)
T ss_dssp             CTTCEEEESSTTBHHHHHHHHHHHHTTC-EEEEEESSGG
T ss_pred             CCCCEEEEEeccccchhhhhhhhccccc-cccccccccc
Confidence            3568999999999999999999999996 8999987653

>d1t2da1 c.2.1.5 (A:1-150) Lactate dehydrogenase {Malaria parasite (Plasmodium falciparum) [TaxId: 5833]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: LDH N-terminal domain-like
domain: Lactate dehydrogenase
species: Malaria parasite (Plasmodium falciparum) [TaxId: 5833]

Probab=91.94  E-value=0.11  Score=40.42  Aligned_cols=37  Identities=22%  Similarity=0.421  Sum_probs=31.7

Q ss_pred             CCeEEEEcCCChhHHHHHHHHHHcCCceEEEEecCCCC
Q 017760           11 GKTFLVTGGLGHVGSALCLELVRRGAYQVRAFDLRTNS   48 (366)
Q Consensus        11 ~~~VlITGgtGfiG~~L~~~L~~~g~~~V~~~dr~~~~   48 (366)
                      +.||.|.|+ |.+|+.++..|...+..++.++|+++..
T Consensus         3 ~~KI~IIGa-G~VG~~~a~~l~~~~l~el~L~Di~~~~   39 (150)
T d1t2da1           3 KAKIVLVGS-GMIGGVMATLIVQKNLGDVVLFDIVKNM   39 (150)
T ss_dssp             CCEEEEECC-SHHHHHHHHHHHHTTCCEEEEECSSSSH
T ss_pred             CCeEEEECC-CHHHHHHHHHHHhCCCCeEEEEeccCCc
Confidence            468999985 9999999998888887799999987643

>d1c0pa1 c.4.1.2 (A:999-1193,A:1289-1361) D-aminoacid oxidase, N-terminal domain {Rhodotorula gracilis [TaxId: 5286]}

class: Alpha and beta proteins (a/b)
fold: Nucleotide-binding domain
superfamily: Nucleotide-binding domain
family: D-aminoacid oxidase, N-terminal domain
domain: D-aminoacid oxidase, N-terminal domain
species: Rhodotorula gracilis [TaxId: 5286]

Probab=91.90  E-value=0.13  Score=42.60  Aligned_cols=36  Identities=31%  Similarity=0.464  Sum_probs=31.2

Q ss_pred             cCCeEEEEcCCChhHHHHHHHHHHcCCceEEEEecCCC
Q 017760           10 EGKTFLVTGGLGHVGSALCLELVRRGAYQVRAFDLRTN   47 (366)
Q Consensus        10 ~~~~VlITGgtGfiG~~L~~~L~~~g~~~V~~~dr~~~   47 (366)
                      +.++|+|. |+|..|-..+..|.++| ++|.++++...
T Consensus         5 ~~~kVvVI-GaGiaGl~~A~~L~~~G-~~V~vier~~~   40 (268)
T d1c0pa1           5 SQKRVVVL-GSGVIGLSSALILARKG-YSVHILARDLP   40 (268)
T ss_dssp             CSCEEEEE-CCSHHHHHHHHHHHHTT-CEEEEEESSCT
T ss_pred             CCCcEEEE-CccHHHHHHHHHHHHCC-CCEEEEeCCCC
Confidence            35689988 78999999999999999 59999998753

>d1yqga2 c.2.1.6 (A:1-152) Pyrroline-5-carboxylate reductase ProC {Neisseria meningitidis, serogroup B [TaxId: 487]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: 6-phosphogluconate dehydrogenase-like, N-terminal domain
domain: Pyrroline-5-carboxylate reductase ProC
species: Neisseria meningitidis, serogroup B [TaxId: 487]

Probab=91.74  E-value=0.092  Score=40.80  Aligned_cols=35  Identities=20%  Similarity=0.357  Sum_probs=30.0

Q ss_pred             CeEEEEcCCChhHHHHHHHHHHcCCceEEEEecCCC
Q 017760           12 KTFLVTGGLGHVGSALCLELVRRGAYQVRAFDLRTN   47 (366)
Q Consensus        12 ~~VlITGgtGfiG~~L~~~L~~~g~~~V~~~dr~~~   47 (366)
                      |+|.+. |+|.+|+++++.|++.|.++|.+.||++.
T Consensus         1 MkI~fI-G~G~MG~ai~~~l~~~~~~~i~v~~r~~~   35 (152)
T d1yqga2           1 MNVYFL-GGGNMAAAVAGGLVKQGGYRIYIANRGAE   35 (152)
T ss_dssp             CEEEEE-CCSHHHHHHHHHHHHHCSCEEEEECSSHH
T ss_pred             CEEEEE-cCcHHHHHHHHHHHHCCCCcEEEEeCChh
Confidence            578888 55999999999999988669999988864

>d1kyqa1 c.2.1.11 (A:1-150) Bifunctional dehydrogenase/ferrochelatase Met8p, N-terminal domain {Baker's yeast (Saccharomyces cerevisiae) [TaxId: 4932]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Siroheme synthase N-terminal domain-like
domain: Bifunctional dehydrogenase/ferrochelatase Met8p, N-terminal domain
species: Baker's yeast (Saccharomyces cerevisiae) [TaxId: 4932]

Probab=91.65  E-value=0.088  Score=40.80  Aligned_cols=36  Identities=25%  Similarity=0.464  Sum_probs=31.3

Q ss_pred             cccCCeEEEEcCCChhHHHHHHHHHHcCCceEEEEecC
Q 017760            8 GIEGKTFLVTGGLGHVGSALCLELVRRGAYQVRAFDLR   45 (366)
Q Consensus         8 ~~~~~~VlITGgtGfiG~~L~~~L~~~g~~~V~~~dr~   45 (366)
                      ..++++|||.|| |.+|..-++.|++.|. +|+.++..
T Consensus        10 ~l~gkrvLViGg-G~va~~ka~~Ll~~GA-~VtVvap~   45 (150)
T d1kyqa1          10 QLKDKRILLIGG-GEVGLTRLYKLMPTGC-KLTLVSPD   45 (150)
T ss_dssp             CCTTCEEEEEEE-SHHHHHHHHHHGGGTC-EEEEEEEE
T ss_pred             eeCCCEEEEECC-CHHHHHHHHHHHHCCC-EEEEEeCC
Confidence            467899999977 8899999999999997 89999644

>d1qora2 c.2.1.1 (A:113-291) Quinone oxidoreductase {Escherichia coli [TaxId: 562]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Alcohol dehydrogenase-like, C-terminal domain
domain: Quinone oxidoreductase
species: Escherichia coli [TaxId: 562]

Probab=91.61  E-value=0.088  Score=41.86  Aligned_cols=38  Identities=21%  Similarity=0.198  Sum_probs=33.9

Q ss_pred             ccCCeEEEEcCCChhHHHHHHHHHHcCCceEEEEecCCC
Q 017760            9 IEGKTFLVTGGLGHVGSALCLELVRRGAYQVRAFDLRTN   47 (366)
Q Consensus         9 ~~~~~VlITGgtGfiG~~L~~~L~~~g~~~V~~~dr~~~   47 (366)
                      .++.+|+|+||+|-+|..+++.....|. +|+++++++.
T Consensus        27 ~~g~~Vlv~ga~g~vG~~~iqlak~~Ga-~Vi~~~~s~~   64 (179)
T d1qora2          27 KPDEQFLFHAAAGGVGLIACQWAKALGA-KLIGTVGTAQ   64 (179)
T ss_dssp             CTTCEEEESSTTBHHHHHHHHHHHHHTC-EEEEEESSHH
T ss_pred             CCCCEEEEEccccccchHHHHHHHHhCC-eEeecccchH
Confidence            3468999999999999999999999996 8999988864

>d1o89a2 c.2.1.1 (A:116-292) Hypothetical protein YhdH {Escherichia coli [TaxId: 562]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Alcohol dehydrogenase-like, C-terminal domain
domain: Hypothetical protein YhdH
species: Escherichia coli [TaxId: 562]

Probab=91.44  E-value=0.078  Score=42.58  Aligned_cols=37  Identities=35%  Similarity=0.380  Sum_probs=32.5

Q ss_pred             CCeEEEEcCCChhHHHHHHHHHHcCCceEEEEecCCCC
Q 017760           11 GKTFLVTGGLGHVGSALCLELVRRGAYQVRAFDLRTNS   48 (366)
Q Consensus        11 ~~~VlITGgtGfiG~~L~~~L~~~g~~~V~~~dr~~~~   48 (366)
                      +.+|+|+||+|-+|...++.....|+ +|+++++++.+
T Consensus        32 ~~~vlV~gasGGVG~~aiQlAk~~Ga-~Via~~~~~~k   68 (177)
T d1o89a2          32 DGEIVVTGASGGVGSTAVALLHKLGY-QVVAVSGREST   68 (177)
T ss_dssp             GCEEEESSTTSHHHHHHHHHHHHTTC-CEEEEESCGGG
T ss_pred             CCcEEEEEccccchHHHHHHHHHcCC-CeEEEecchhH
Confidence            45899999999999999999999996 89999887543

>d1dlja2 c.2.1.6 (A:1-196) UDP-glucose dehydrogenase (UDPGDH) {Streptococcus pyogenes [TaxId: 1314]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: 6-phosphogluconate dehydrogenase-like, N-terminal domain
domain: UDP-glucose dehydrogenase (UDPGDH)
species: Streptococcus pyogenes [TaxId: 1314]

Probab=91.40  E-value=0.082  Score=42.90  Aligned_cols=33  Identities=27%  Similarity=0.316  Sum_probs=27.5

Q ss_pred             CeEEEEcCCChhHHHHHHHHHHcCCceEEEEecCCC
Q 017760           12 KTFLVTGGLGHVGSALCLELVRRGAYQVRAFDLRTN   47 (366)
Q Consensus        12 ~~VlITGgtGfiG~~L~~~L~~~g~~~V~~~dr~~~   47 (366)
                      |||.|. |.||+|..++..| ++| ++|+++|.++.
T Consensus         1 MkI~Vi-GlG~vGl~~a~~~-a~g-~~V~g~Din~~   33 (196)
T d1dlja2           1 MKIAVA-GSGYVGLSLGVLL-SLQ-NEVTIVDILPS   33 (196)
T ss_dssp             CEEEEE-CCSHHHHHHHHHH-TTT-SEEEEECSCHH
T ss_pred             CEEEEE-CCChhHHHHHHHH-HCC-CcEEEEECCHH
Confidence            679998 5999999999766 469 59999998853

>d7mdha1 c.2.1.5 (A:23-197) Malate dehydrogenase {Sorghum (Sorghum vulgare), chloroplast [TaxId: 4558]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: LDH N-terminal domain-like
domain: Malate dehydrogenase
species: Sorghum (Sorghum vulgare), chloroplast [TaxId: 4558]

Probab=91.33  E-value=0.1  Score=41.87  Aligned_cols=36  Identities=14%  Similarity=0.228  Sum_probs=26.9

Q ss_pred             CCeEEEEcCCChhHHHHHHHHHHcCC------ceEEEEecCC
Q 017760           11 GKTFLVTGGLGHVGSALCLELVRRGA------YQVRAFDLRT   46 (366)
Q Consensus        11 ~~~VlITGgtGfiG~~L~~~L~~~g~------~~V~~~dr~~   46 (366)
                      ..||.||||+|.+|++++..|.+.+.      -.++.+|...
T Consensus        24 ~~kV~I~GA~G~Ig~~l~~~La~g~v~g~~~~i~L~L~di~~   65 (175)
T d7mdha1          24 LVNIAVSGAAGMISNHLLFKLASGEVFGQDQPIALKLLGSER   65 (175)
T ss_dssp             CEEEEEETTTSHHHHHHHHHHHHTTTTCTTCCEEEEEECCGG
T ss_pred             CcEEEEECCCcHHHHHHHHHHHcCcccCCCceEEEEEecCcc
Confidence            34799999999999999999987531      1455555554

>d1wdka3 c.2.1.6 (A:311-496) Fatty oxidation complex alpha subunit, middle domain {Pseudomonas fragi [TaxId: 296]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: 6-phosphogluconate dehydrogenase-like, N-terminal domain
domain: Fatty oxidation complex alpha subunit, middle domain
species: Pseudomonas fragi [TaxId: 296]

Probab=91.18  E-value=0.076  Score=42.97  Aligned_cols=34  Identities=21%  Similarity=0.332  Sum_probs=30.2

Q ss_pred             CCeEEEEcCCChhHHHHHHHHHHcCCceEEEEecCC
Q 017760           11 GKTFLVTGGLGHVGSALCLELVRRGAYQVRAFDLRT   46 (366)
Q Consensus        11 ~~~VlITGgtGfiG~~L~~~L~~~g~~~V~~~dr~~   46 (366)
                      -++|.|.|+ |.+|+.++..++..| ++|+++|+++
T Consensus         4 I~~vaViGa-G~mG~~iA~~~a~~G-~~V~l~D~~~   37 (186)
T d1wdka3           4 VKQAAVLGA-GIMGGGIAYQSASKG-TPILMKDINE   37 (186)
T ss_dssp             CSSEEEECC-HHHHHHHHHHHHHTT-CCEEEECSSH
T ss_pred             CCEEEEECc-CHHHHHHHHHHHhCC-CeEEEEECCH
Confidence            367999976 999999999999999 4999999875

>d5mdha1 c.2.1.5 (A:1-154) Malate dehydrogenase {Pig (Sus scrofa) [TaxId: 9823]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: LDH N-terminal domain-like
domain: Malate dehydrogenase
species: Pig (Sus scrofa) [TaxId: 9823]

Probab=91.10  E-value=0.054  Score=42.45  Aligned_cols=37  Identities=19%  Similarity=0.252  Sum_probs=27.9

Q ss_pred             CCeEEEEcCCChhHHHHHHHHHHcCC------ceEEEEecCCC
Q 017760           11 GKTFLVTGGLGHVGSALCLELVRRGA------YQVRAFDLRTN   47 (366)
Q Consensus        11 ~~~VlITGgtGfiG~~L~~~L~~~g~------~~V~~~dr~~~   47 (366)
                      .+||.|+||+|.+|++++..|.+.+.      -+++.+|.+..
T Consensus         3 p~KV~IiGA~G~VG~~la~~l~~~~~~~~~~~~~L~l~d~~~~   45 (154)
T d5mdha1           3 PIRVLVTGAAGQIAYSLLYSIGNGSVFGKDQPIILVLLDITPM   45 (154)
T ss_dssp             CEEEEESSTTSHHHHTTHHHHHTTTTTCTTCCEEEEEECCGGG
T ss_pred             ceEEEEECCCCHHHHHHHHHHHHHHhcCCCCccEEEEecCccc
Confidence            36899999999999999999986542      14566665543

>d1d7ya2 c.3.1.5 (A:116-236) NADH-dependent ferredoxin reductase, BphA4 {Pseudomonas sp., KKS102 [TaxId: 306]}

class: Alpha and beta proteins (a/b)
fold: FAD/NAD(P)-binding domain
superfamily: FAD/NAD(P)-binding domain
family: FAD/NAD-linked reductases, N-terminal and central domains
domain: NADH-dependent ferredoxin reductase, BphA4
species: Pseudomonas sp., KKS102 [TaxId: 306]

Probab=91.09  E-value=0.17  Score=37.67  Aligned_cols=35  Identities=20%  Similarity=0.322  Sum_probs=30.5

Q ss_pred             CCeEEEEcCCChhHHHHHHHHHHcCCceEEEEecCCC
Q 017760           11 GKTFLVTGGLGHVGSALCLELVRRGAYQVRAFDLRTN   47 (366)
Q Consensus        11 ~~~VlITGgtGfiG~~L~~~L~~~g~~~V~~~dr~~~   47 (366)
                      .++++|. |+|++|-.++..|.++| .+|+.+++.+.
T Consensus        30 ~~~vvII-GgG~iG~E~A~~l~~~g-~~Vtli~~~~~   64 (121)
T d1d7ya2          30 QSRLLIV-GGGVIGLELAATARTAG-VHVSLVETQPR   64 (121)
T ss_dssp             TCEEEEE-CCSHHHHHHHHHHHHTT-CEEEEEESSSS
T ss_pred             CCeEEEE-CcchhHHHHHHHhhccc-ceEEEEeeccc
Confidence            4688877 78999999999999999 59999998764

>d1i36a2 c.2.1.6 (A:1-152) Conserved hypothetical protein MTH1747 {Archaeon Methanobacterium thermoautotrophicum [TaxId: 145262]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: 6-phosphogluconate dehydrogenase-like, N-terminal domain
domain: Conserved hypothetical protein MTH1747
species: Archaeon Methanobacterium thermoautotrophicum [TaxId: 145262]

Probab=91.00  E-value=0.12  Score=40.04  Aligned_cols=35  Identities=23%  Similarity=0.213  Sum_probs=30.0

Q ss_pred             CeEEEEcCCChhHHHHHHHHHHcCCceEEEEecCCCC
Q 017760           12 KTFLVTGGLGHVGSALCLELVRRGAYQVRAFDLRTNS   48 (366)
Q Consensus        12 ~~VlITGgtGfiG~~L~~~L~~~g~~~V~~~dr~~~~   48 (366)
                      |||.|. |.|.+|+.+++.|.+.| ++|...+++++.
T Consensus         1 MkIgiI-G~G~mG~~ia~~l~~~g-~~v~~~~~~~~~   35 (152)
T d1i36a2           1 LRVGFI-GFGEVAQTLASRLRSRG-VEVVTSLEGRSP   35 (152)
T ss_dssp             CEEEEE-SCSHHHHHHHHHHHHTT-CEEEECCTTCCH
T ss_pred             CEEEEE-cHHHHHHHHHHHHHHCC-CeEEEEcCchhH
Confidence            578888 77999999999999999 589998876643

>d1pgja2 c.2.1.6 (A:1-178) 6-phosphogluconate dehydrogenase {Trypanosoma brucei [TaxId: 5691]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: 6-phosphogluconate dehydrogenase-like, N-terminal domain
domain: 6-phosphogluconate dehydrogenase
species: Trypanosoma brucei [TaxId: 5691]

Probab=90.92  E-value=0.094  Score=41.79  Aligned_cols=34  Identities=29%  Similarity=0.581  Sum_probs=30.0

Q ss_pred             CeEEEEcCCChhHHHHHHHHHHcCCceEEEEecCCC
Q 017760           12 KTFLVTGGLGHVGSALCLELVRRGAYQVRAFDLRTN   47 (366)
Q Consensus        12 ~~VlITGgtGfiG~~L~~~L~~~g~~~V~~~dr~~~   47 (366)
                      |||-|. |.|.+|..+++.|+++| ++|.+.||++.
T Consensus         2 MkIGvI-GlG~MG~~ma~~L~~~G-~~V~~~dr~~~   35 (178)
T d1pgja2           2 MDVGVV-GLGVMGANLALNIAEKG-FKVAVFNRTYS   35 (178)
T ss_dssp             BSEEEE-CCSHHHHHHHHHHHHTT-CCEEEECSSHH
T ss_pred             CEEEEE-eehHHHHHHHHHHHHCC-CeEEEEECCHH
Confidence            468777 89999999999999999 59999998754

>d1i0za1 c.2.1.5 (A:1-160) Lactate dehydrogenase {Human (Homo sapiens), heart isoform (H chain) [TaxId: 9606]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: LDH N-terminal domain-like
domain: Lactate dehydrogenase
species: Human (Homo sapiens), heart isoform (H chain) [TaxId: 9606]

Probab=90.85  E-value=0.19  Score=39.56  Aligned_cols=38  Identities=18%  Similarity=0.370  Sum_probs=32.2

Q ss_pred             ccCCeEEEEcCCChhHHHHHHHHHHcCC-ceEEEEecCCC
Q 017760            9 IEGKTFLVTGGLGHVGSALCLELVRRGA-YQVRAFDLRTN   47 (366)
Q Consensus         9 ~~~~~VlITGgtGfiG~~L~~~L~~~g~-~~V~~~dr~~~   47 (366)
                      .+..||.|.|+ |.+|+.++..|..+|. .++..+|+++.
T Consensus        18 ~~~~KV~IIGa-G~VG~~~A~~l~~~~l~~ElvLiD~~~~   56 (160)
T d1i0za1          18 VPNNKITVVGV-GQVGMACAISILGKSLADELALVDVLED   56 (160)
T ss_dssp             CCSSEEEEECC-SHHHHHHHHHHHHTTCCSEEEEECSCHH
T ss_pred             CCCCeEEEECC-CHHHHHHHHHHHhcCCCcEEEEEEeccc
Confidence            44679999985 9999999999999983 68999998753

>d1hyha1 c.2.1.5 (A:21-166) L-2-hydroxyisocapronate dehydrogenase, L-HICDH {Lactobacillus confusus [TaxId: 1583]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: LDH N-terminal domain-like
domain: L-2-hydroxyisocapronate dehydrogenase, L-HICDH
species: Lactobacillus confusus [TaxId: 1583]

Probab=90.73  E-value=0.14  Score=39.70  Aligned_cols=35  Identities=29%  Similarity=0.453  Sum_probs=30.0

Q ss_pred             CeEEEEcCCChhHHHHHHHHHHcC-CceEEEEecCCC
Q 017760           12 KTFLVTGGLGHVGSALCLELVRRG-AYQVRAFDLRTN   47 (366)
Q Consensus        12 ~~VlITGgtGfiG~~L~~~L~~~g-~~~V~~~dr~~~   47 (366)
                      +||.|+| +|.+|+.++..|..+| ..++..+|+++.
T Consensus         2 kKI~IIG-aG~VG~~~a~~l~~~~~~~elvL~Di~~~   37 (146)
T d1hyha1           2 RKIGIIG-LGNVGAAVAHGLIAQGVADDYVFIDANEA   37 (146)
T ss_dssp             CEEEEEC-CSHHHHHHHHHHHHHTCCSEEEEECSSHH
T ss_pred             CeEEEEC-cCHHHHHHHHHHHhcCCCceEEEEecccc
Confidence            6899998 5999999999999887 358999998764

>d1u7za_ c.72.3.1 (A:) Coenzyme A biosynthesis bifunctional protein CoaBC, phosphopantothenoylcysteine synthase domain (CoaB) {Escherichia coli [TaxId: 562]}

class: Alpha and beta proteins (a/b)
fold: Ribokinase-like
superfamily: CoaB-like
family: CoaB-like
domain: Coenzyme A biosynthesis bifunctional protein CoaBC, phosphopantothenoylcysteine synthase domain (CoaB)
species: Escherichia coli [TaxId: 562]

Probab=90.72  E-value=0.22  Score=41.39  Aligned_cols=38  Identities=26%  Similarity=0.421  Sum_probs=32.0

Q ss_pred             cccCCeEEEEcC----------------CChhHHHHHHHHHHcCCceEEEEecCC
Q 017760            8 GIEGKTFLVTGG----------------LGHVGSALCLELVRRGAYQVRAFDLRT   46 (366)
Q Consensus         8 ~~~~~~VlITGg----------------tGfiG~~L~~~L~~~g~~~V~~~dr~~   46 (366)
                      ..++++||||+|                ||..|.+|++++.++|+ +|+.+.-..
T Consensus         3 dl~g~~vlITaG~T~E~ID~VR~ItN~SSGk~G~aiA~~~~~~Ga-~V~li~g~~   56 (223)
T d1u7za_           3 DLKHLNIMITAGPTREPLDPVRYISDHSSGKMGFAIAAAAARRGA-NVTLVSGPV   56 (223)
T ss_dssp             TTTTCEEEEEESBCEEESSSSEEEEECCCSHHHHHHHHHHHHTTC-EEEEEECSC
T ss_pred             ccCCCEEEEECCCCcccCCCcceeccCCcHHHHHHHHHHHHHcCC-chhhhhccc
Confidence            356788999987                79999999999999995 899986544

>d1a5za1 c.2.1.5 (A:22-163) Lactate dehydrogenase {Thermotoga maritima [TaxId: 2336]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: LDH N-terminal domain-like
domain: Lactate dehydrogenase
species: Thermotoga maritima [TaxId: 2336]

Probab=90.32  E-value=0.16  Score=38.98  Aligned_cols=35  Identities=23%  Similarity=0.380  Sum_probs=29.7

Q ss_pred             CeEEEEcCCChhHHHHHHHHHHcCC-ceEEEEecCCC
Q 017760           12 KTFLVTGGLGHVGSALCLELVRRGA-YQVRAFDLRTN   47 (366)
Q Consensus        12 ~~VlITGgtGfiG~~L~~~L~~~g~-~~V~~~dr~~~   47 (366)
                      |||.|.|+ |.+|+.++..|..++. .++..+|+++.
T Consensus         1 mKI~IIGa-G~VG~~~a~~l~~~~l~~el~L~Di~~~   36 (140)
T d1a5za1           1 MKIGIVGL-GRVGSSTAFALLMKGFAREMVLIDVDKK   36 (140)
T ss_dssp             CEEEEECC-SHHHHHHHHHHHHHTCCSEEEEECSSHH
T ss_pred             CEEEEECc-CHHHHHHHHHHHhCCCCCEEEEEecccc
Confidence            58999986 9999999999988873 58999998863

>d1pqwa_ c.2.1.1 (A:) Putative enoyl reductase domain of polyketide synthase {Mycobacterium tuberculosis [TaxId: 1773]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Alcohol dehydrogenase-like, C-terminal domain
domain: Putative enoyl reductase domain of polyketide synthase
species: Mycobacterium tuberculosis [TaxId: 1773]

Probab=90.27  E-value=0.14  Score=40.82  Aligned_cols=36  Identities=22%  Similarity=0.206  Sum_probs=31.8

Q ss_pred             cCCeEEEEcCCChhHHHHHHHHHHcCCceEEEEecCC
Q 017760           10 EGKTFLVTGGLGHVGSALCLELVRRGAYQVRAFDLRT   46 (366)
Q Consensus        10 ~~~~VlITGgtGfiG~~L~~~L~~~g~~~V~~~dr~~   46 (366)
                      ++.+|+|+||+|-+|...++.+...|. +|+++++++
T Consensus        25 ~g~~VlI~ga~g~vG~~~iqla~~~g~-~vi~~~~~~   60 (183)
T d1pqwa_          25 PGERVLIHSATGGVGMAAVSIAKMIGA-RIYTTAGSD   60 (183)
T ss_dssp             TTCEEEETTTTSHHHHHHHHHHHHHTC-EEEEEESSH
T ss_pred             CCCEEEEECCCCCcccccchhhccccc-cceeeeccc
Confidence            467999999999999999999999996 899988664

>d1kjqa2 c.30.1.1 (A:2-112) Glycinamide ribonucleotide transformylase PurT, N-domain {Escherichia coli [TaxId: 562]}

class: Alpha and beta proteins (a/b)
fold: PreATP-grasp domain
superfamily: PreATP-grasp domain
family: BC N-terminal domain-like
domain: Glycinamide ribonucleotide transformylase PurT, N-domain
species: Escherichia coli [TaxId: 562]

Probab=90.10  E-value=0.33  Score=35.51  Aligned_cols=39  Identities=26%  Similarity=0.458  Sum_probs=32.8

Q ss_pred             ccCCeEEEEcCCChhHHHHHHHHHHcCCceEEEEecCCCCc
Q 017760            9 IEGKTFLVTGGLGHVGSALCLELVRRGAYQVRAFDLRTNSP   49 (366)
Q Consensus         9 ~~~~~VlITGgtGfiG~~L~~~L~~~g~~~V~~~dr~~~~~   49 (366)
                      ....||.|.| +|.+|+-++....+.|+ +|+++|.++..+
T Consensus         9 ~~~~kigIlG-gGQL~rMla~aA~~lG~-~v~v~d~~~~~P   47 (111)
T d1kjqa2           9 PAATRVMLLG-SGELGKEVAIECQRLGV-EVIAVDRYADAP   47 (111)
T ss_dssp             TTCCEEEEES-CSHHHHHHHHHHHTTTC-EEEEEESSTTCG
T ss_pred             CCCCEEEEEe-CCHHHHHHHHHHHHCCC-EEEEEcCCCCCc
Confidence            3456899995 89999999999999995 899999876543

>d1gpja2 c.2.1.7 (A:144-302) Glutamyl tRNA-reductase middle domain {Archaeon Methanopyrus kandleri [TaxId: 2320]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Aminoacid dehydrogenase-like, C-terminal domain
domain: Glutamyl tRNA-reductase middle domain
species: Archaeon Methanopyrus kandleri [TaxId: 2320]

Probab=89.98  E-value=0.2  Score=39.30  Aligned_cols=38  Identities=32%  Similarity=0.476  Sum_probs=32.8

Q ss_pred             ccCCeEEEEcCCChhHHHHHHHHHHcCCceEEEEecCCC
Q 017760            9 IEGKTFLVTGGLGHVGSALCLELVRRGAYQVRAFDLRTN   47 (366)
Q Consensus         9 ~~~~~VlITGgtGfiG~~L~~~L~~~g~~~V~~~dr~~~   47 (366)
                      .++++|+|.|+ |-+|+.+++.|.+.|..+|....|+..
T Consensus        22 l~~~~ilviGa-G~~g~~v~~~L~~~g~~~i~v~nRt~~   59 (159)
T d1gpja2          22 LHDKTVLVVGA-GEMGKTVAKSLVDRGVRAVLVANRTYE   59 (159)
T ss_dssp             CTTCEEEEESC-CHHHHHHHHHHHHHCCSEEEEECSSHH
T ss_pred             cccCeEEEECC-CHHHHHHHHHHHhcCCcEEEEEcCcHH
Confidence            56789999987 999999999999999767888887743

>d1vm6a3 c.2.1.3 (A:1-96,A:183-214) Dihydrodipicolinate reductase {Thermotoga maritima [TaxId: 2336]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Glyceraldehyde-3-phosphate dehydrogenase-like, N-terminal domain
domain: Dihydrodipicolinate reductase
species: Thermotoga maritima [TaxId: 2336]

Probab=89.79  E-value=0.23  Score=37.40  Aligned_cols=30  Identities=13%  Similarity=0.229  Sum_probs=25.5

Q ss_pred             CeEEEEcCCChhHHHHHHHHHHcCCceEEEE
Q 017760           12 KTFLVTGGLGHVGSALCLELVRRGAYQVRAF   42 (366)
Q Consensus        12 ~~VlITGgtGfiG~~L~~~L~~~g~~~V~~~   42 (366)
                      |||.|.|++|-+|+.+.+.+.+++ +++.+-
T Consensus         1 mki~i~G~~GrMG~~i~~~~~~~~-~~l~~~   30 (128)
T d1vm6a3           1 MKYGIVGYSGRMGQEIQKVFSEKG-HELVLK   30 (128)
T ss_dssp             CEEEEETTTSHHHHHHHHHHHHTT-CEEEEE
T ss_pred             CEEEEECCCCHHHHHHHHHHhcCC-CeEEEE
Confidence            589999999999999999988888 466543

>d2pgda2 c.2.1.6 (A:1-176) 6-phosphogluconate dehydrogenase {Sheep (Ovis orientalis aries) [TaxId: 9940]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: 6-phosphogluconate dehydrogenase-like, N-terminal domain
domain: 6-phosphogluconate dehydrogenase
species: Sheep (Ovis orientalis aries) [TaxId: 9940]

Probab=89.61  E-value=0.16  Score=40.35  Aligned_cols=34  Identities=26%  Similarity=0.471  Sum_probs=30.0

Q ss_pred             CeEEEEcCCChhHHHHHHHHHHcCCceEEEEecCCC
Q 017760           12 KTFLVTGGLGHVGSALCLELVRRGAYQVRAFDLRTN   47 (366)
Q Consensus        12 ~~VlITGgtGfiG~~L~~~L~~~g~~~V~~~dr~~~   47 (366)
                      .+|-|. |.|.+|+.+++.|+++| ++|+++||++.
T Consensus         3 ~nIg~I-GlG~MG~~mA~~L~~~G-~~V~v~dr~~~   36 (176)
T d2pgda2           3 ADIALI-GLAVMGQNLILNMNDHG-FVVCAFNRTVS   36 (176)
T ss_dssp             BSEEEE-CCSHHHHHHHHHHHHTT-CCEEEECSSTH
T ss_pred             CcEEEE-eEhHHHHHHHHHHHHCC-CeEEEEcCCHH
Confidence            568787 67999999999999999 59999999874

>d1nhpa2 c.3.1.5 (A:120-242) NADH peroxidase {Enterococcus faecalis [TaxId: 1351]}

class: Alpha and beta proteins (a/b)
fold: FAD/NAD(P)-binding domain
superfamily: FAD/NAD(P)-binding domain
family: FAD/NAD-linked reductases, N-terminal and central domains
domain: NADH peroxidase
species: Enterococcus faecalis [TaxId: 1351]

Probab=89.54  E-value=0.32  Score=36.13  Aligned_cols=36  Identities=22%  Similarity=0.385  Sum_probs=30.8

Q ss_pred             cCCeEEEEcCCChhHHHHHHHHHHcCCceEEEEecCCC
Q 017760           10 EGKTFLVTGGLGHVGSALCLELVRRGAYQVRAFDLRTN   47 (366)
Q Consensus        10 ~~~~VlITGgtGfiG~~L~~~L~~~g~~~V~~~dr~~~   47 (366)
                      ..++|+|. |+|++|-.++..|.+.|. +|+.+.+.+.
T Consensus        29 ~~k~vvVi-GgG~iG~E~A~~l~~~g~-~Vtlie~~~~   64 (123)
T d1nhpa2          29 EVNNVVVI-GSGYIGIEAAEAFAKAGK-KVTVIDILDR   64 (123)
T ss_dssp             TCCEEEEE-CCSHHHHHHHHHHHHTTC-EEEEEESSSS
T ss_pred             CCCEEEEE-CChHHHHHHHHHhhccce-EEEEEEecCc
Confidence            35688887 789999999999999994 8999988753

>d1llda1 c.2.1.5 (A:7-149) Lactate dehydrogenase {Bifidobacterium longum, strain am101-2 [TaxId: 216816]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: LDH N-terminal domain-like
domain: Lactate dehydrogenase
species: Bifidobacterium longum, strain am101-2 [TaxId: 216816]

Probab=89.31  E-value=0.24  Score=38.14  Aligned_cols=35  Identities=29%  Similarity=0.484  Sum_probs=30.1

Q ss_pred             CeEEEEcCCChhHHHHHHHHHHcCC-ceEEEEecCCC
Q 017760           12 KTFLVTGGLGHVGSALCLELVRRGA-YQVRAFDLRTN   47 (366)
Q Consensus        12 ~~VlITGgtGfiG~~L~~~L~~~g~-~~V~~~dr~~~   47 (366)
                      .||.|+|+ |.+|++++..|..+|. .++.++|+++.
T Consensus         2 ~Ki~IIGa-G~VG~~~a~~l~~~~l~~ElvL~D~~~~   37 (143)
T d1llda1           2 TKLAVIGA-GAVGSTLAFAAAQRGIAREIVLEDIAKE   37 (143)
T ss_dssp             CEEEEECC-SHHHHHHHHHHHHTTCCSEEEEECSSHH
T ss_pred             CEEEEECC-CHHHHHHHHHHHhcCCCcEEEEEEeccc
Confidence            47999986 9999999999998873 58999998864

>d1piwa2 c.2.1.1 (A:153-320) Cinnamyl alcohol dehydrogenase, ADH6 {Baker's yeast (Saccharomyces cerevisiae) [TaxId: 4932]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Alcohol dehydrogenase-like, C-terminal domain
domain: Cinnamyl alcohol dehydrogenase, ADH6
species: Baker's yeast (Saccharomyces cerevisiae) [TaxId: 4932]

Probab=89.28  E-value=0.26  Score=38.63  Aligned_cols=38  Identities=24%  Similarity=0.200  Sum_probs=31.9

Q ss_pred             ccCCeEEEEcCCChhHHHHHHHHHHcCCceEEEEecCCCC
Q 017760            9 IEGKTFLVTGGLGHVGSALCLELVRRGAYQVRAFDLRTNS   48 (366)
Q Consensus         9 ~~~~~VlITGgtGfiG~~L~~~L~~~g~~~V~~~dr~~~~   48 (366)
                      .++.+|+|.|+ |-+|...++.+...|. +|+++|+++..
T Consensus        26 ~~g~~vlI~Ga-G~vG~~a~q~ak~~G~-~vi~~~~~~~k   63 (168)
T d1piwa2          26 GPGKKVGIVGL-GGIGSMGTLISKAMGA-ETYVISRSSRK   63 (168)
T ss_dssp             STTCEEEEECC-SHHHHHHHHHHHHHTC-EEEEEESSSTT
T ss_pred             CCCCEEEEECC-CCcchhHHHHhhhccc-cccccccchhH
Confidence            35689999976 8999999998888896 89999987653

>d1ebda2 c.3.1.5 (A:155-271) Dihydrolipoamide dehydrogenase {Bacillus stearothermophilus [TaxId: 1422]}

class: Alpha and beta proteins (a/b)
fold: FAD/NAD(P)-binding domain
superfamily: FAD/NAD(P)-binding domain
family: FAD/NAD-linked reductases, N-terminal and central domains
domain: Dihydrolipoamide dehydrogenase
species: Bacillus stearothermophilus [TaxId: 1422]

Probab=88.97  E-value=0.31  Score=35.74  Aligned_cols=34  Identities=24%  Similarity=0.313  Sum_probs=30.0

Q ss_pred             CeEEEEcCCChhHHHHHHHHHHcCCceEEEEecCCC
Q 017760           12 KTFLVTGGLGHVGSALCLELVRRGAYQVRAFDLRTN   47 (366)
Q Consensus        12 ~~VlITGgtGfiG~~L~~~L~~~g~~~V~~~dr~~~   47 (366)
                      ++++|. |+|++|-.++..|.+.| .+|+++.+.+.
T Consensus        23 ~~v~Ii-GgG~ig~E~A~~l~~~G-~~Vtlve~~~~   56 (117)
T d1ebda2          23 KSLVVI-GGGYIGIELGTAYANFG-TKVTILEGAGE   56 (117)
T ss_dssp             SEEEEE-CCSHHHHHHHHHHHHTT-CEEEEEESSSS
T ss_pred             CeEEEE-CCCccceeeeeeecccc-cEEEEEEecce
Confidence            678887 77999999999999999 59999988764

>d1vj0a2 c.2.1.1 (A:156-337) Hypothetical protein TM0436 {Thermotoga maritima [TaxId: 2336]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Alcohol dehydrogenase-like, C-terminal domain
domain: Hypothetical protein TM0436
species: Thermotoga maritima [TaxId: 2336]

Probab=88.95  E-value=0.21  Score=39.73  Aligned_cols=38  Identities=26%  Similarity=0.283  Sum_probs=32.3

Q ss_pred             ccCCeEEEEcCCChhHHHHHHHHHHcCCceEEEEecCCC
Q 017760            9 IEGKTFLVTGGLGHVGSALCLELVRRGAYQVRAFDLRTN   47 (366)
Q Consensus         9 ~~~~~VlITGgtGfiG~~L~~~L~~~g~~~V~~~dr~~~   47 (366)
                      .++.+|+|+|+ |-+|...++.+...|..+|+++|+++.
T Consensus        27 ~~G~~VlV~Ga-G~iG~~~~~~ak~~Ga~~Vi~~~~~~~   64 (182)
T d1vj0a2          27 FAGKTVVIQGA-GPLGLFGVVIARSLGAENVIVIAGSPN   64 (182)
T ss_dssp             CBTCEEEEECC-SHHHHHHHHHHHHTTBSEEEEEESCHH
T ss_pred             CCCCEEEEECC-Cccchhheecccccccccccccccccc
Confidence            45789999986 889999999999999657999988754

>d1jvba2 c.2.1.1 (A:144-313) Alcohol dehydrogenase {Archaeon Sulfolobus solfataricus [TaxId: 2287]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Alcohol dehydrogenase-like, C-terminal domain
domain: Alcohol dehydrogenase
species: Archaeon Sulfolobus solfataricus [TaxId: 2287]

Probab=88.27  E-value=0.32  Score=38.09  Aligned_cols=38  Identities=24%  Similarity=0.238  Sum_probs=32.8

Q ss_pred             ccCCeEEEEcCCChhHHHHHHHHHHcCCceEEEEecCC
Q 017760            9 IEGKTFLVTGGLGHVGSALCLELVRRGAYQVRAFDLRT   46 (366)
Q Consensus         9 ~~~~~VlITGgtGfiG~~L~~~L~~~g~~~V~~~dr~~   46 (366)
                      .++.+|+|+|++|-+|...+..+...|..+|++.++++
T Consensus        26 ~~g~~vlV~G~~G~vG~~~~~~~~~~g~~~V~~~~~~~   63 (170)
T d1jvba2          26 DPTKTLLVVGAGGGLGTMAVQIAKAVSGATIIGVDVRE   63 (170)
T ss_dssp             CTTCEEEEETTTSHHHHHHHHHHHHHTCCEEEEEESSH
T ss_pred             CCCCEEEEEeccccceeeeeecccccccccccccccch
Confidence            34678999999999999999999988866899998775

>d1gesa2 c.3.1.5 (A:147-262) Glutathione reductase {Escherichia coli [TaxId: 562]}

class: Alpha and beta proteins (a/b)
fold: FAD/NAD(P)-binding domain
superfamily: FAD/NAD(P)-binding domain
family: FAD/NAD-linked reductases, N-terminal and central domains
domain: Glutathione reductase
species: Escherichia coli [TaxId: 562]

Probab=88.26  E-value=0.32  Score=35.68  Aligned_cols=34  Identities=24%  Similarity=0.333  Sum_probs=29.7

Q ss_pred             CeEEEEcCCChhHHHHHHHHHHcCCceEEEEecCCC
Q 017760           12 KTFLVTGGLGHVGSALCLELVRRGAYQVRAFDLRTN   47 (366)
Q Consensus        12 ~~VlITGgtGfiG~~L~~~L~~~g~~~V~~~dr~~~   47 (366)
                      ++|+|. |+|++|-.++..|.+.|. +|+.+.+.+.
T Consensus        22 ~~vvIi-GgG~ig~E~A~~l~~~G~-~Vtlve~~~~   55 (116)
T d1gesa2          22 ERVAVV-GAGYIGVELGGVINGLGA-KTHLFEMFDA   55 (116)
T ss_dssp             SEEEEE-CCSHHHHHHHHHHHHTTC-EEEEECSSSS
T ss_pred             CEEEEE-CCChhhHHHHHHhhcccc-EEEEEeecch
Confidence            578877 789999999999999994 9999988763

>d1v59a2 c.3.1.5 (A:161-282) Dihydrolipoamide dehydrogenase {Baker's yeast (Saccharomyces cerevisiae) [TaxId: 4932]}

class: Alpha and beta proteins (a/b)
fold: FAD/NAD(P)-binding domain
superfamily: FAD/NAD(P)-binding domain
family: FAD/NAD-linked reductases, N-terminal and central domains
domain: Dihydrolipoamide dehydrogenase
species: Baker's yeast (Saccharomyces cerevisiae) [TaxId: 4932]

Probab=88.03  E-value=0.34  Score=35.90  Aligned_cols=35  Identities=20%  Similarity=0.322  Sum_probs=30.3

Q ss_pred             CCeEEEEcCCChhHHHHHHHHHHcCCceEEEEecCCC
Q 017760           11 GKTFLVTGGLGHVGSALCLELVRRGAYQVRAFDLRTN   47 (366)
Q Consensus        11 ~~~VlITGgtGfiG~~L~~~L~~~g~~~V~~~dr~~~   47 (366)
                      .++++|. |+|++|-.++..|.+.| .+|+.+.+++.
T Consensus        23 p~~~vIi-G~G~ig~E~A~~l~~lG-~~Vtii~~~~~   57 (122)
T d1v59a2          23 PKRLTII-GGGIIGLEMGSVYSRLG-SKVTVVEFQPQ   57 (122)
T ss_dssp             CSEEEEE-CCSHHHHHHHHHHHHTT-CEEEEECSSSS
T ss_pred             CCeEEEE-CCCchHHHHHHHHHhhC-cceeEEEeccc
Confidence            3678888 78999999999999999 49999988763

>d3etja2 c.30.1.1 (A:1-78) N5-carboxyaminoimidazole ribonucleotide synthetase PurK (AIRC), N-domain {Escherichia coli [TaxId: 562]}

class: Alpha and beta proteins (a/b)
fold: PreATP-grasp domain
superfamily: PreATP-grasp domain
family: BC N-terminal domain-like
domain: N5-carboxyaminoimidazole ribonucleotide synthetase PurK (AIRC), N-domain
species: Escherichia coli [TaxId: 562]

Probab=87.98  E-value=0.24  Score=33.86  Aligned_cols=36  Identities=25%  Similarity=0.220  Sum_probs=30.7

Q ss_pred             CCeEEEEcCCChhHHHHHHHHHHcCCceEEEEecCCCC
Q 017760           11 GKTFLVTGGLGHVGSALCLELVRRGAYQVRAFDLRTNS   48 (366)
Q Consensus        11 ~~~VlITGgtGfiG~~L~~~L~~~g~~~V~~~dr~~~~   48 (366)
                      +++|.|. |+|.+|+=++.+-.+.|+ +|+.+|-.+..
T Consensus         1 ~k~vgIl-G~GQLgrMl~~Aa~~LG~-~v~vldp~~~~   36 (78)
T d3etja2           1 MKQVCVL-GNGQLGRMLRQAGEPLGI-AVWPVGLDAEP   36 (78)
T ss_dssp             CEEEEEE-BCSHHHHHHHHHHGGGTE-EEEEECTTSCG
T ss_pred             CCEEEEE-cCCHHHHHHHHHHHHcCC-EEEEEcCCCCC
Confidence            4789998 679999999999999995 89999876543

>d1gtea4 c.4.1.1 (A:184-287,A:441-532) Dihydropyrimidine dehydrogenase, domain 2 {Pig (Sus scrofa) [TaxId: 9823]}

class: Alpha and beta proteins (a/b)
fold: Nucleotide-binding domain
superfamily: Nucleotide-binding domain
family: N-terminal domain of adrenodoxin reductase-like
domain: Dihydropyrimidine dehydrogenase, domain 2
species: Pig (Sus scrofa) [TaxId: 9823]

Probab=87.87  E-value=0.29  Score=38.83  Aligned_cols=37  Identities=16%  Similarity=0.192  Sum_probs=31.3

Q ss_pred             cCCeEEEEcCCChhHHHHHHHHHHcCCceEEEEecCCC
Q 017760           10 EGKTFLVTGGLGHVGSALCLELVRRGAYQVRAFDLRTN   47 (366)
Q Consensus        10 ~~~~VlITGgtGfiG~~L~~~L~~~g~~~V~~~dr~~~   47 (366)
                      .++||+|. |+|..|-..+..|.+.|.++|+++++++.
T Consensus         3 ~~~kVaII-GaGpaGl~aA~~l~~~G~~~V~v~E~~~~   39 (196)
T d1gtea4           3 YSAKIALL-GAGPASISCASFLARLGYSDITIFEKQEY   39 (196)
T ss_dssp             GGCCEEEE-CCSHHHHHHHHHHHHTTCCCEEEEESSSS
T ss_pred             CCCEEEEE-CChHHHHHHHHHHHHCCCCeEEEEEecCc
Confidence            35789998 78999999999999999646999988753

>d1onfa2 c.3.1.5 (A:154-270) Glutathione reductase {Plasmodium falciparum [TaxId: 5833]}

class: Alpha and beta proteins (a/b)
fold: FAD/NAD(P)-binding domain
superfamily: FAD/NAD(P)-binding domain
family: FAD/NAD-linked reductases, N-terminal and central domains
domain: Glutathione reductase
species: Plasmodium falciparum [TaxId: 5833]

Probab=87.71  E-value=0.33  Score=35.74  Aligned_cols=35  Identities=20%  Similarity=0.229  Sum_probs=30.2

Q ss_pred             CCeEEEEcCCChhHHHHHHHHHHcCCceEEEEecCCC
Q 017760           11 GKTFLVTGGLGHVGSALCLELVRRGAYQVRAFDLRTN   47 (366)
Q Consensus        11 ~~~VlITGgtGfiG~~L~~~L~~~g~~~V~~~dr~~~   47 (366)
                      .++|+|. |+|++|-.++..|.+.|. +|+.+.+.+.
T Consensus        22 p~~v~Ii-GgG~iG~E~A~~l~~~g~-~Vtlv~~~~~   56 (117)
T d1onfa2          22 SKKIGIV-GSGYIAVELINVIKRLGI-DSYIFARGNR   56 (117)
T ss_dssp             CSEEEEE-CCSHHHHHHHHHHHTTTC-EEEEECSSSS
T ss_pred             CCEEEEE-CCchHHHHHHHHHHhccc-cceeeehhcc
Confidence            4678887 779999999999999994 9999988753

>d2ivda1 c.3.1.2 (A:10-306,A:415-464) Protoporphyrinogen oxidase {Myxococcus xanthus [TaxId: 34]}

class: Alpha and beta proteins (a/b)
fold: FAD/NAD(P)-binding domain
superfamily: FAD/NAD(P)-binding domain
family: FAD-linked reductases, N-terminal domain
domain: Protoporphyrinogen oxidase
species: Myxococcus xanthus [TaxId: 34]

Probab=87.53  E-value=0.22  Score=41.71  Aligned_cols=34  Identities=26%  Similarity=0.374  Sum_probs=29.3

Q ss_pred             CeEEEEcCCChhHHHHHHHHHHcCCceEEEEecCCC
Q 017760           12 KTFLVTGGLGHVGSALCLELVRRGAYQVRAFDLRTN   47 (366)
Q Consensus        12 ~~VlITGgtGfiG~~L~~~L~~~g~~~V~~~dr~~~   47 (366)
                      |+|+|.|| |.-|-..+..|.++| ++|.++.+++.
T Consensus         1 m~V~IIGa-G~aGL~aA~~L~~~G-~~V~vlE~~~~   34 (347)
T d2ivda1           1 MNVAVVGG-GISGLAVAHHLRSRG-TDAVLLESSAR   34 (347)
T ss_dssp             CCEEEECC-BHHHHHHHHHHHTTT-CCEEEECSSSS
T ss_pred             CeEEEECC-CHHHHHHHHHHHhCC-CCEEEEecCCC
Confidence            57899954 999999999999999 58999987653

>d2ahra2 c.2.1.6 (A:1-152) Pyrroline-5-carboxylate reductase ProC {Streptococcus pyogenes [TaxId: 1314]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: 6-phosphogluconate dehydrogenase-like, N-terminal domain
domain: Pyrroline-5-carboxylate reductase ProC
species: Streptococcus pyogenes [TaxId: 1314]

Probab=87.44  E-value=0.28  Score=37.94  Aligned_cols=33  Identities=15%  Similarity=0.130  Sum_probs=29.1

Q ss_pred             CeEEEEcCCChhHHHHHHHHHHcCCceEEEEecCC
Q 017760           12 KTFLVTGGLGHVGSALCLELVRRGAYQVRAFDLRT   46 (366)
Q Consensus        12 ~~VlITGgtGfiG~~L~~~L~~~g~~~V~~~dr~~   46 (366)
                      |||.+. |+|.+|+++++.|.+.| ++|++.+|++
T Consensus         1 MkIg~I-G~G~mG~al~~~l~~~~-~~i~v~~r~~   33 (152)
T d2ahra2           1 MKIGII-GVGKMASAIIKGLKQTP-HELIISGSSL   33 (152)
T ss_dssp             CEEEEE-CCSHHHHHHHHHHTTSS-CEEEEECSSH
T ss_pred             CEEEEE-eccHHHHHHHHHHHhCC-CeEEEEcChH
Confidence            578887 89999999999999999 5999998774

>d1txga2 c.2.1.6 (A:1-180) Glycerol-3- phosphate dehydrogenase {Archaeoglobus fulgidus [TaxId: 2234]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: 6-phosphogluconate dehydrogenase-like, N-terminal domain
domain: Glycerol-3- phosphate dehydrogenase
species: Archaeoglobus fulgidus [TaxId: 2234]

Probab=87.21  E-value=0.28  Score=39.06  Aligned_cols=33  Identities=33%  Similarity=0.500  Sum_probs=28.9

Q ss_pred             CeEEEEcCCChhHHHHHHHHHHcCCceEEEEecCC
Q 017760           12 KTFLVTGGLGHVGSALCLELVRRGAYQVRAFDLRT   46 (366)
Q Consensus        12 ~~VlITGgtGfiG~~L~~~L~~~g~~~V~~~dr~~   46 (366)
                      |+|.|. |+|-.|++++..|.+.| ++|+...|..
T Consensus         1 MkI~Vi-GaG~~GtalA~~la~~g-~~V~l~~r~~   33 (180)
T d1txga2           1 MIVSIL-GAGAMGSALSVPLVDNG-NEVRIWGTEF   33 (180)
T ss_dssp             CEEEEE-SCCHHHHHHHHHHHHHC-CEEEEECCGG
T ss_pred             CEEEEE-CCCHHHHHHHHHHHHCC-CEEEEEEecc
Confidence            689998 56999999999999999 6999997754

>d1lvla2 c.3.1.5 (A:151-265) Dihydrolipoamide dehydrogenase {Pseudomonas putida [TaxId: 303]}

class: Alpha and beta proteins (a/b)
fold: FAD/NAD(P)-binding domain
superfamily: FAD/NAD(P)-binding domain
family: FAD/NAD-linked reductases, N-terminal and central domains
domain: Dihydrolipoamide dehydrogenase
species: Pseudomonas putida [TaxId: 303]

Probab=87.14  E-value=0.38  Score=35.09  Aligned_cols=34  Identities=26%  Similarity=0.421  Sum_probs=29.4

Q ss_pred             CeEEEEcCCChhHHHHHHHHHHcCCceEEEEecCCC
Q 017760           12 KTFLVTGGLGHVGSALCLELVRRGAYQVRAFDLRTN   47 (366)
Q Consensus        12 ~~VlITGgtGfiG~~L~~~L~~~g~~~V~~~dr~~~   47 (366)
                      ++++|. |+|++|-.++..|.+.| ++|+.+.+.+.
T Consensus        22 ~~vvIi-GgG~~G~E~A~~l~~~g-~~Vtlve~~~~   55 (115)
T d1lvla2          22 QHLVVV-GGGYIGLELGIAYRKLG-AQVSVVEARER   55 (115)
T ss_dssp             SEEEEE-CCSHHHHHHHHHHHHHT-CEEEEECSSSS
T ss_pred             CeEEEE-CCCHHHHHHHHHHhhcc-cceEEEeeecc
Confidence            677777 78999999999999999 49999987653

>d1q1ra2 c.3.1.5 (A:115-247) Putidaredoxin reductase {Pseudomonas putida [TaxId: 303]}

class: Alpha and beta proteins (a/b)
fold: FAD/NAD(P)-binding domain
superfamily: FAD/NAD(P)-binding domain
family: FAD/NAD-linked reductases, N-terminal and central domains
domain: Putidaredoxin reductase
species: Pseudomonas putida [TaxId: 303]

Probab=87.13  E-value=0.43  Score=35.90  Aligned_cols=36  Identities=17%  Similarity=0.326  Sum_probs=31.3

Q ss_pred             cCCeEEEEcCCChhHHHHHHHHHHcCCceEEEEecCCC
Q 017760           10 EGKTFLVTGGLGHVGSALCLELVRRGAYQVRAFDLRTN   47 (366)
Q Consensus        10 ~~~~VlITGgtGfiG~~L~~~L~~~g~~~V~~~dr~~~   47 (366)
                      ..++|+|. |+|++|-.++..|.+.|. +|+.+++.+.
T Consensus        34 ~~k~v~VI-GgG~iG~E~A~~l~~~g~-~Vtvie~~~~   69 (133)
T d1q1ra2          34 ADNRLVVI-GGGYIGLEVAATAIKANM-HVTLLDTAAR   69 (133)
T ss_dssp             TTCEEEEE-CCSHHHHHHHHHHHHTTC-EEEEECSSSS
T ss_pred             cCCEEEEE-CCchHHHHHHHHHHhhCc-ceeeeeeccc
Confidence            35788888 789999999999999995 9999988764

>d3lada2 c.3.1.5 (A:159-277) Dihydrolipoamide dehydrogenase {Azotobacter vinelandii [TaxId: 354]}

class: Alpha and beta proteins (a/b)
fold: FAD/NAD(P)-binding domain
superfamily: FAD/NAD(P)-binding domain
family: FAD/NAD-linked reductases, N-terminal and central domains
domain: Dihydrolipoamide dehydrogenase
species: Azotobacter vinelandii [TaxId: 354]

Probab=86.63  E-value=0.65  Score=34.05  Aligned_cols=35  Identities=23%  Similarity=0.262  Sum_probs=30.4

Q ss_pred             CCeEEEEcCCChhHHHHHHHHHHcCCceEEEEecCCC
Q 017760           11 GKTFLVTGGLGHVGSALCLELVRRGAYQVRAFDLRTN   47 (366)
Q Consensus        11 ~~~VlITGgtGfiG~~L~~~L~~~g~~~V~~~dr~~~   47 (366)
                      .++++|. |+|++|-.++..|.+.| .+|+.+.+.+.
T Consensus        22 p~~i~Ii-G~G~ig~E~A~~l~~~G-~~Vtiv~~~~~   56 (119)
T d3lada2          22 PGKLGVI-GAGVIGLELGSVWARLG-AEVTVLEAMDK   56 (119)
T ss_dssp             CSEEEEE-CCSHHHHHHHHHHHHTT-CEEEEEESSSS
T ss_pred             CCeEEEE-CCChHHHHHHHHHHHcC-CceEEEEeecc
Confidence            3678888 78999999999999999 59999987764

>d2bi7a1 c.4.1.3 (A:2-247,A:317-384) UDP-galactopyranose mutase, N-terminal domain {Klebsiella pneumoniae [TaxId: 573]}

class: Alpha and beta proteins (a/b)
fold: Nucleotide-binding domain
superfamily: Nucleotide-binding domain
family: UDP-galactopyranose mutase, N-terminal domain
domain: UDP-galactopyranose mutase, N-terminal domain
species: Klebsiella pneumoniae [TaxId: 573]

Probab=86.60  E-value=0.39  Score=41.81  Aligned_cols=36  Identities=31%  Similarity=0.524  Sum_probs=31.5

Q ss_pred             CCeEEEEcCCChhHHHHHHHHHHcCCceEEEEecCCCC
Q 017760           11 GKTFLVTGGLGHVGSALCLELVRRGAYQVRAFDLRTNS   48 (366)
Q Consensus        11 ~~~VlITGgtGfiG~~L~~~L~~~g~~~V~~~dr~~~~   48 (366)
                      +++|+|. |+|.-|-..|..|.++| ++|.+++.++..
T Consensus         2 ~KKI~II-GaG~sGL~aA~~L~k~G-~~V~viEk~~~i   37 (314)
T d2bi7a1           2 SKKILIV-GAGFSGAVIGRQLAEKG-HQVHIIDQRDHI   37 (314)
T ss_dssp             CCEEEEE-CCSHHHHHHHHHHHTTT-CEEEEEESSSSS
T ss_pred             CCEEEEE-CCcHHHHHHHHHHHhCC-CCEEEEECCCCC
Confidence            5789888 78999999999999999 599999888654

>d1xhca2 c.3.1.5 (A:104-225) NADH oxidase /nitrite reductase {Pyrococcus furiosus [TaxId: 2261]}

class: Alpha and beta proteins (a/b)
fold: FAD/NAD(P)-binding domain
superfamily: FAD/NAD(P)-binding domain
family: FAD/NAD-linked reductases, N-terminal and central domains
domain: NADH oxidase /nitrite reductase
species: Pyrococcus furiosus [TaxId: 2261]

Probab=86.26  E-value=0.39  Score=35.49  Aligned_cols=34  Identities=24%  Similarity=0.394  Sum_probs=29.4

Q ss_pred             CeEEEEcCCChhHHHHHHHHHHcCCceEEEEecCCC
Q 017760           12 KTFLVTGGLGHVGSALCLELVRRGAYQVRAFDLRTN   47 (366)
Q Consensus        12 ~~VlITGgtGfiG~~L~~~L~~~g~~~V~~~dr~~~   47 (366)
                      ++++|. |+|++|-.++..|.+.| ++|+.+.+.+.
T Consensus        33 ~~vvIi-GgG~iG~E~A~~l~~~g-~~Vtlv~~~~~   66 (122)
T d1xhca2          33 GEAIII-GGGFIGLELAGNLAEAG-YHVKLIHRGAM   66 (122)
T ss_dssp             SEEEEE-ECSHHHHHHHHHHHHTT-CEEEEECSSSC
T ss_pred             CcEEEE-CCcHHHHHHHHHhhccc-ceEEEEecccc
Confidence            577776 78999999999999999 49999987754

>d1uh5a_ c.2.1.2 (A:) Enoyl-ACP reductase {Malaria parasite (Plasmodium falciparum) [TaxId: 5833]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Tyrosine-dependent oxidoreductases
domain: Enoyl-ACP reductase
species: Malaria parasite (Plasmodium falciparum) [TaxId: 5833]

Probab=86.17  E-value=0.38  Score=42.20  Aligned_cols=35  Identities=14%  Similarity=0.156  Sum_probs=29.3

Q ss_pred             CCeEEEEc--CCChhHHHHHHHHHHcCCceEEEEecCC
Q 017760           11 GKTFLVTG--GLGHVGSALCLELVRRGAYQVRAFDLRT   46 (366)
Q Consensus        11 ~~~VlITG--gtGfiG~~L~~~L~~~g~~~V~~~dr~~   46 (366)
                      .+..||||  ++.-||.++++.|.+.|+ +|.+.++..
T Consensus         2 ~kVAlITGaa~s~GIG~aiA~~la~~GA-~V~i~~~~~   38 (329)
T d1uh5a_           2 EDICFIAGIGDTNGYGWGIAKELSKRNV-KIIFGIWPP   38 (329)
T ss_dssp             CCEEEEECCSSSSSHHHHHHHHHHHTTC-EEEEEECGG
T ss_pred             CcEEEEeCCCCCChHHHHHHHHHHHcCC-EEEEEeCch
Confidence            36789999  446899999999999997 899887654

>d1ps9a3 c.4.1.1 (A:331-465,A:628-671) 2,4-dienoyl-CoA reductase, middle domain {Escherichia coli [TaxId: 562]}

class: Alpha and beta proteins (a/b)
fold: Nucleotide-binding domain
superfamily: Nucleotide-binding domain
family: N-terminal domain of adrenodoxin reductase-like
domain: 2,4-dienoyl-CoA reductase, middle domain
species: Escherichia coli [TaxId: 562]

Probab=85.77  E-value=0.69  Score=36.77  Aligned_cols=37  Identities=32%  Similarity=0.553  Sum_probs=32.1

Q ss_pred             ccCCeEEEEcCCChhHHHHHHHHHHcCCceEEEEecCCC
Q 017760            9 IEGKTFLVTGGLGHVGSALCLELVRRGAYQVRAFDLRTN   47 (366)
Q Consensus         9 ~~~~~VlITGgtGfiG~~L~~~L~~~g~~~V~~~dr~~~   47 (366)
                      ...++|+|. |+|..|-..+..|.++| |+|+++++.+.
T Consensus        41 ~~~k~V~II-GaGPAGL~AA~~la~~G-~~Vtl~E~~~~   77 (179)
T d1ps9a3          41 VQKKNLAVV-GAGPAGLAFAINAAARG-HQVTLFDAHSE   77 (179)
T ss_dssp             SSCCEEEEE-CCSHHHHHHHHHHHTTT-CEEEEEESSSS
T ss_pred             CCCcEEEEE-CccHHHHHHHHHHHhhc-cceEEEeccCc
Confidence            346889999 78999999999999999 69999988753

>d3grsa2 c.3.1.5 (A:166-290) Glutathione reductase {Human (Homo sapiens) [TaxId: 9606]}

class: Alpha and beta proteins (a/b)
fold: FAD/NAD(P)-binding domain
superfamily: FAD/NAD(P)-binding domain
family: FAD/NAD-linked reductases, N-terminal and central domains
domain: Glutathione reductase
species: Human (Homo sapiens) [TaxId: 9606]

Probab=85.68  E-value=0.55  Score=34.82  Aligned_cols=34  Identities=12%  Similarity=0.143  Sum_probs=29.9

Q ss_pred             CeEEEEcCCChhHHHHHHHHHHcCCceEEEEecCCC
Q 017760           12 KTFLVTGGLGHVGSALCLELVRRGAYQVRAFDLRTN   47 (366)
Q Consensus        12 ~~VlITGgtGfiG~~L~~~L~~~g~~~V~~~dr~~~   47 (366)
                      ++++|. |+|++|-.++..|.+.|. +|+.+.+.+.
T Consensus        23 k~vvIv-GgG~iG~E~A~~l~~~G~-~Vtlv~~~~~   56 (125)
T d3grsa2          23 GRSVIV-GAGYIAVEMAGILSALGS-KTSLMIRHDK   56 (125)
T ss_dssp             SEEEEE-CCSHHHHHHHHHHHHTTC-EEEEECSSSS
T ss_pred             CEEEEE-cCCccHHHHHHHHhcCCc-EEEEEeeccc
Confidence            678888 679999999999999995 9999998753

>d1ryia1 c.3.1.2 (A:1-218,A:307-364) Glycine oxidase ThiO {Bacillus sp. [TaxId: 1409]}

class: Alpha and beta proteins (a/b)
fold: FAD/NAD(P)-binding domain
superfamily: FAD/NAD(P)-binding domain
family: FAD-linked reductases, N-terminal domain
domain: Glycine oxidase ThiO
species: Bacillus sp. [TaxId: 1409]

Probab=85.67  E-value=0.41  Score=40.09  Aligned_cols=32  Identities=28%  Similarity=0.385  Sum_probs=28.3

Q ss_pred             EEEEcCCChhHHHHHHHHHHcCCceEEEEecCCC
Q 017760           14 FLVTGGLGHVGSALCLELVRRGAYQVRAFDLRTN   47 (366)
Q Consensus        14 VlITGgtGfiG~~L~~~L~~~g~~~V~~~dr~~~   47 (366)
                      |+|. |+|..|..++.+|.++|. +|.++++...
T Consensus         7 vvII-GaGi~Gls~A~~La~~G~-~V~vlE~~~~   38 (276)
T d1ryia1           7 AVVI-GGGIIGSAIAYYLAKENK-NTALFESGTM   38 (276)
T ss_dssp             EEEE-CCSHHHHHHHHHHHHTTC-CEEEECSSST
T ss_pred             EEEE-CcCHHHHHHHHHHHHCCC-cEEEEeCCCC
Confidence            7777 789999999999999994 8999998753

>d1mo9a2 c.3.1.5 (A:193-313) NADH-dependent 2-ketopropyl coenzyme M oxidoreductase/carboxylase {Xanthobacter sp., py2 [TaxId: 35809]}

class: Alpha and beta proteins (a/b)
fold: FAD/NAD(P)-binding domain
superfamily: FAD/NAD(P)-binding domain
family: FAD/NAD-linked reductases, N-terminal and central domains
domain: NADH-dependent 2-ketopropyl coenzyme M oxidoreductase/carboxylase
species: Xanthobacter sp., py2 [TaxId: 35809]

Probab=85.17  E-value=0.68  Score=33.80  Aligned_cols=36  Identities=14%  Similarity=0.073  Sum_probs=30.7

Q ss_pred             cCCeEEEEcCCChhHHHHHHHHHHcCCceEEEEecCCC
Q 017760           10 EGKTFLVTGGLGHVGSALCLELVRRGAYQVRAFDLRTN   47 (366)
Q Consensus        10 ~~~~VlITGgtGfiG~~L~~~L~~~g~~~V~~~dr~~~   47 (366)
                      +.++|+|. |+|++|-.++..|.+.| .+|..+.+.+.
T Consensus        21 ~~~~vvVv-GgG~ig~E~A~~l~~~g-~~vt~i~~~~~   56 (121)
T d1mo9a2          21 PGSTVVVV-GGSKTAVEYGCFFNATG-RRTVMLVRTEP   56 (121)
T ss_dssp             CCSEEEEE-CCSHHHHHHHHHHHHTT-CEEEEECSSCT
T ss_pred             CCCEEEEE-CCCHHHHHHHHHHHhcc-hhheEeeccch
Confidence            35788877 78999999999999999 48999988764

>d1li4a1 c.2.1.4 (A:190-352) S-adenosylhomocystein hydrolase {Human (Homo sapiens) [TaxId: 9606]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Formate/glycerate dehydrogenases, NAD-domain
domain: S-adenosylhomocystein hydrolase
species: Human (Homo sapiens) [TaxId: 9606]

Probab=85.16  E-value=0.56  Score=36.74  Aligned_cols=38  Identities=32%  Similarity=0.389  Sum_probs=33.6

Q ss_pred             cccCCeEEEEcCCChhHHHHHHHHHHcCCceEEEEecCCC
Q 017760            8 GIEGKTFLVTGGLGHVGSALCLELVRRGAYQVRAFDLRTN   47 (366)
Q Consensus         8 ~~~~~~VlITGgtGfiG~~L~~~L~~~g~~~V~~~dr~~~   47 (366)
                      ...+++++|. |.|.+|+.+++.+...|. +|.+.++.+.
T Consensus        21 ~l~Gk~v~V~-GyG~iG~g~A~~~rg~G~-~V~v~e~dp~   58 (163)
T d1li4a1          21 MIAGKVAVVA-GYGDVGKGCAQALRGFGA-RVIITEIDPI   58 (163)
T ss_dssp             CCTTCEEEEE-CCSHHHHHHHHHHHHTTC-EEEEECSCHH
T ss_pred             eecCCEEEEe-ccccccHHHHHHHHhCCC-eeEeeecccc
Confidence            4678899988 899999999999999996 8999998763

>d1h6va2 c.3.1.5 (A:171-292) Mammalian thioredoxin reductase {Rat (Rattus norvegicus) [TaxId: 10116]}

class: Alpha and beta proteins (a/b)
fold: FAD/NAD(P)-binding domain
superfamily: FAD/NAD(P)-binding domain
family: FAD/NAD-linked reductases, N-terminal and central domains
domain: Mammalian thioredoxin reductase
species: Rat (Rattus norvegicus) [TaxId: 10116]

Probab=85.13  E-value=0.53  Score=34.82  Aligned_cols=33  Identities=21%  Similarity=0.066  Sum_probs=28.5

Q ss_pred             CeEEEEcCCChhHHHHHHHHHHcCCceEEEEecCC
Q 017760           12 KTFLVTGGLGHVGSALCLELVRRGAYQVRAFDLRT   46 (366)
Q Consensus        12 ~~VlITGgtGfiG~~L~~~L~~~g~~~V~~~dr~~   46 (366)
                      ++++|. |+|++|-.++..|.+.|. +|+.+.+++
T Consensus        21 ~~vvII-GgG~iG~E~A~~l~~lG~-~Vtii~~~~   53 (122)
T d1h6va2          21 GKTLVV-GASYVALECAGFLAGIGL-DVTVMVRSI   53 (122)
T ss_dssp             CSEEEE-CCSHHHHHHHHHHHHTTC-CEEEEESSS
T ss_pred             CeEEEE-CCCccHHHHHHHHhhcCC-eEEEEEech
Confidence            567777 789999999999999995 899998653

>d1npya1 c.2.1.7 (A:103-269) Shikimate 5-dehydrogenase-like protein HI0607 {Haemophilus influenzae [TaxId: 727]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Aminoacid dehydrogenase-like, C-terminal domain
domain: Shikimate 5-dehydrogenase-like protein HI0607
species: Haemophilus influenzae [TaxId: 727]

Probab=85.09  E-value=0.41  Score=37.55  Aligned_cols=37  Identities=14%  Similarity=0.322  Sum_probs=31.1

Q ss_pred             cCCeEEEEcCCChhHHHHHHHHHHcCCceEEEEecCCC
Q 017760           10 EGKTFLVTGGLGHVGSALCLELVRRGAYQVRAFDLRTN   47 (366)
Q Consensus        10 ~~~~VlITGgtGfiG~~L~~~L~~~g~~~V~~~dr~~~   47 (366)
                      +.++|+|.|+ |-.|++++..|.+.|..+|.+++|+..
T Consensus        16 ~~~~vlIlGa-GGaarai~~aL~~~g~~~I~I~nR~~~   52 (167)
T d1npya1          16 KNAKVIVHGS-GGMAKAVVAAFKNSGFEKLKIYARNVK   52 (167)
T ss_dssp             TTSCEEEECS-STTHHHHHHHHHHTTCCCEEEECSCHH
T ss_pred             CCCeEEEECC-CHHHHHHHHHHHHCCCCEEEEecccHH
Confidence            4578999965 778999999999999768999988754

>d1vj1a2 c.2.1.1 (A:125-311) Putative zinc-binding alcohol dehydrogenase {Mouse (Mus musculus) [TaxId: 10090]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Alcohol dehydrogenase-like, C-terminal domain
domain: Putative zinc-binding alcohol dehydrogenase
species: Mouse (Mus musculus) [TaxId: 10090]

Probab=85.03  E-value=0.37  Score=38.52  Aligned_cols=35  Identities=23%  Similarity=0.150  Sum_probs=28.7

Q ss_pred             CCeEEEEcCCChhHHHHHHHHHHcCCceEEEEecC
Q 017760           11 GKTFLVTGGLGHVGSALCLELVRRGAYQVRAFDLR   45 (366)
Q Consensus        11 ~~~VlITGgtGfiG~~L~~~L~~~g~~~V~~~dr~   45 (366)
                      ..+|||+||+|-+|+..++.....|.+.|+..+.+
T Consensus        31 ~etVLI~gaaGgVG~~aiQlak~~Ga~~vi~~~~~   65 (187)
T d1vj1a2          31 NQTMVVSGAAGACGSLAGQIGHLLGCSRVVGICGT   65 (187)
T ss_dssp             CCEEEESSTTSTTGGGHHHHHHHTTCSEEEEEESS
T ss_pred             CCEEEEECCCchhhHHHHHHHHHcCCcceecccch
Confidence            37899999999999999999988997555555544

>d2jhfa2 c.2.1.1 (A:164-339) Alcohol dehydrogenase {Horse (Equus caballus) [TaxId: 9796]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Alcohol dehydrogenase-like, C-terminal domain
domain: Alcohol dehydrogenase
species: Horse (Equus caballus) [TaxId: 9796]

Probab=84.91  E-value=0.41  Score=37.64  Aligned_cols=39  Identities=26%  Similarity=0.352  Sum_probs=31.7

Q ss_pred             ccCCeEEEEcCCChhHHHHHHHHHHcCCceEEEEecCCCC
Q 017760            9 IEGKTFLVTGGLGHVGSALCLELVRRGAYQVRAFDLRTNS   48 (366)
Q Consensus         9 ~~~~~VlITGgtGfiG~~L~~~L~~~g~~~V~~~dr~~~~   48 (366)
                      .++.+|+|.|++| +|...+..+...|..+|++.++++..
T Consensus        27 k~GdtVlV~GaGG-~G~~~~~~~~~~g~~~Vi~~~~~~~k   65 (176)
T d2jhfa2          27 TQGSTCAVFGLGG-VGLSVIMGCKAAGAARIIGVDINKDK   65 (176)
T ss_dssp             CTTCEEEEECCSH-HHHHHHHHHHHTTCSEEEEECSCGGG
T ss_pred             CCCCEEEEECCCC-cHHHHHHHHHHcCCceEEeecCcHHH
Confidence            3568999999955 89888888888886689999887653

>d1q0qa2 c.2.1.3 (A:1-125,A:275-300) 1-deoxy-D-xylulose-5-phosphate reductoisomerase {Escherichia coli [TaxId: 562]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Glyceraldehyde-3-phosphate dehydrogenase-like, N-terminal domain
domain: 1-deoxy-D-xylulose-5-phosphate reductoisomerase
species: Escherichia coli [TaxId: 562]

Probab=84.71  E-value=0.61  Score=36.03  Aligned_cols=38  Identities=18%  Similarity=0.221  Sum_probs=30.5

Q ss_pred             CCeEEEEcCCChhHHHHHHHHHHcC-CceEEEEecCCCC
Q 017760           11 GKTFLVTGGLGHVGSALCLELVRRG-AYQVRAFDLRTNS   48 (366)
Q Consensus        11 ~~~VlITGgtGfiG~~L~~~L~~~g-~~~V~~~dr~~~~   48 (366)
                      |++|.|.|+||-||.....-+.+.. ..+|.++.-....
T Consensus         1 MK~I~IlGsTGSIG~~tL~Vi~~~~d~f~v~~Lsa~~N~   39 (151)
T d1q0qa2           1 MKQLTILGSTGSIGCSTLDVVRHNPEHFRVVALVAGKNV   39 (151)
T ss_dssp             CEEEEEETTTSHHHHHHHHHHHHCTTTEEEEEEEESSCH
T ss_pred             CCeEEEEcCCcHHHHHHHHHHHhCCCCcEEEEEEecCcH
Confidence            5789999999999999999887752 2489888766543

>d1vi2a1 c.2.1.7 (A:107-288) Putative shikimate dehydrogenase YdiB {Escherichia coli [TaxId: 562]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Aminoacid dehydrogenase-like, C-terminal domain
domain: Putative shikimate dehydrogenase YdiB
species: Escherichia coli [TaxId: 562]

Probab=84.60  E-value=0.77  Score=36.37  Aligned_cols=39  Identities=26%  Similarity=0.450  Sum_probs=32.8

Q ss_pred             ccCCeEEEEcCCChhHHHHHHHHHHcCCceEEEEecCCCC
Q 017760            9 IEGKTFLVTGGLGHVGSALCLELVRRGAYQVRAFDLRTNS   48 (366)
Q Consensus         9 ~~~~~VlITGgtGfiG~~L~~~L~~~g~~~V~~~dr~~~~   48 (366)
                      .++++|+|.|+ |-.|++++..|.+.|..++++++|++..
T Consensus        16 l~~k~vlIlGa-GGaarai~~al~~~g~~~i~i~nR~~~~   54 (182)
T d1vi2a1          16 IKGKTMVLLGA-GGASTAIGAQGAIEGLKEIKLFNRRDEF   54 (182)
T ss_dssp             CTTCEEEEECC-SHHHHHHHHHHHHTTCSEEEEEECSSTT
T ss_pred             cCCCEEEEECC-cHHHHHHHHHHhhcCCceEeeeccchHH
Confidence            45689999966 6778999999999998789999988654

>d1e3ja2 c.2.1.1 (A:143-312) Ketose reductase (sorbitol dehydrogenase) {Silverleaf whitefly (Bemisia argentifolii) [TaxId: 77855]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Alcohol dehydrogenase-like, C-terminal domain
domain: Ketose reductase (sorbitol dehydrogenase)
species: Silverleaf whitefly (Bemisia argentifolii) [TaxId: 77855]

Probab=84.14  E-value=0.72  Score=35.81  Aligned_cols=36  Identities=31%  Similarity=0.301  Sum_probs=30.8

Q ss_pred             cCCeEEEEcCCChhHHHHHHHHHHcCCceEEEEecCCC
Q 017760           10 EGKTFLVTGGLGHVGSALCLELVRRGAYQVRAFDLRTN   47 (366)
Q Consensus        10 ~~~~VlITGgtGfiG~~L~~~L~~~g~~~V~~~dr~~~   47 (366)
                      .+.+|+|+| +|-+|...+..+...|. +|+++|+++.
T Consensus        26 ~g~~vlV~G-~G~vG~~~~~~ak~~Ga-~vi~v~~~~~   61 (170)
T d1e3ja2          26 LGTTVLVIG-AGPIGLVSVLAAKAYGA-FVVCTARSPR   61 (170)
T ss_dssp             TTCEEEEEC-CSHHHHHHHHHHHHTTC-EEEEEESCHH
T ss_pred             CCCEEEEEc-ccccchhhHhhHhhhcc-cccccchHHH
Confidence            467899996 78999999999999996 8999987754

>d1pl8a2 c.2.1.1 (A:146-316) Ketose reductase (sorbitol dehydrogenase) {Human (Homo sapiens) [TaxId: 9606]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Alcohol dehydrogenase-like, C-terminal domain
domain: Ketose reductase (sorbitol dehydrogenase)
species: Human (Homo sapiens) [TaxId: 9606]

Probab=84.12  E-value=0.6  Score=36.47  Aligned_cols=37  Identities=35%  Similarity=0.407  Sum_probs=31.3

Q ss_pred             cCCeEEEEcCCChhHHHHHHHHHHcCCceEEEEecCCC
Q 017760           10 EGKTFLVTGGLGHVGSALCLELVRRGAYQVRAFDLRTN   47 (366)
Q Consensus        10 ~~~~VlITGgtGfiG~~L~~~L~~~g~~~V~~~dr~~~   47 (366)
                      ++.+|+|.|+ |-+|...+..+...|..+|++.|+++.
T Consensus        26 ~gd~VlI~G~-G~iG~~~~~~a~~~G~~~Vi~~d~~~~   62 (171)
T d1pl8a2          26 LGHKVLVCGA-GPIGMVTLLVAKAMGAAQVVVTDLSAT   62 (171)
T ss_dssp             TTCEEEEECC-SHHHHHHHHHHHHTTCSEEEEEESCHH
T ss_pred             CCCEEEEECC-CccHHHHHHHHHHcCCceEEeccCCHH
Confidence            4678999975 999999999999999767999987753

>d1llua2 c.2.1.1 (A:144-309) Alcohol dehydrogenase {Pseudomonas aeruginosa [TaxId: 287]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Alcohol dehydrogenase-like, C-terminal domain
domain: Alcohol dehydrogenase
species: Pseudomonas aeruginosa [TaxId: 287]

Probab=84.07  E-value=0.59  Score=36.22  Aligned_cols=37  Identities=22%  Similarity=0.267  Sum_probs=30.8

Q ss_pred             ccCCeEEEEcCCChhHHHHHHHHHHcCCceEEEEecCCC
Q 017760            9 IEGKTFLVTGGLGHVGSALCLELVRRGAYQVRAFDLRTN   47 (366)
Q Consensus         9 ~~~~~VlITGgtGfiG~~L~~~L~~~g~~~V~~~dr~~~   47 (366)
                      .++.+|+|.|+ |-+|...+..+...|. +|+++|+++.
T Consensus        26 ~~g~~VlV~Ga-G~vG~~~~~~ak~~G~-~Vi~~~~~~~   62 (166)
T d1llua2          26 RPGQWVAISGI-GGLGHVAVQYARAMGL-HVAAIDIDDA   62 (166)
T ss_dssp             CTTCEEEEECC-SHHHHHHHHHHHHTTC-EEEEEESCHH
T ss_pred             CCCCEEEEeec-cccHHHHHHHHHHcCC-ccceecchhh
Confidence            34688999875 8899999998888995 8999988753

>d2fy8a1 c.2.1.9 (A:116-244) Potassium channel-related protein MthK {Archaeon Methanothermobacter thermautotrophicus [TaxId: 145262]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Potassium channel NAD-binding domain
domain: Potassium channel-related protein MthK
species: Archaeon Methanothermobacter thermautotrophicus [TaxId: 145262]

Probab=83.92  E-value=0.24  Score=36.99  Aligned_cols=48  Identities=17%  Similarity=0.239  Sum_probs=32.5

Q ss_pred             CeEEEEcCCChhHHHHHHHHHHcCCceEEEEecCCCCcccccccCCCeEEEEcc
Q 017760           12 KTFLVTGGLGHVGSALCLELVRRGAYQVRAFDLRTNSPWSHLLINHGVHCIQGL   65 (366)
Q Consensus        12 ~~VlITGgtGfiG~~L~~~L~~~g~~~V~~~dr~~~~~~~~~~~~~~v~~i~gD   65 (366)
                      ++|+|+| -|-+|+.+++.|.  | ++|.+++.++...  ......++.++.||
T Consensus         1 kHivI~G-~g~~g~~l~~~L~--~-~~i~vi~~d~~~~--~~~~~~~~~~i~Gd   48 (129)
T d2fy8a1           1 RHVVICG-WSESTLECLRELR--G-SEVFVLAEDENVR--KKVLRSGANFVHGD   48 (129)
T ss_dssp             CCEEEES-CCHHHHHHHHTSC--G-GGEEEEESCTTHH--HHHHHTTCEEEESC
T ss_pred             CEEEEEC-CCHHHHHHHHHHc--C-CCCEEEEcchHHH--HHHHhcCccccccc
Confidence            4688886 5888999999985  4 3577777665422  23334566777776

>d1c1da1 c.2.1.7 (A:149-349) Phenylalanine dehydrogenase {Rhodococcus sp., M4 [TaxId: 1831]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Aminoacid dehydrogenase-like, C-terminal domain
domain: Phenylalanine dehydrogenase
species: Rhodococcus sp., M4 [TaxId: 1831]

Probab=83.87  E-value=0.76  Score=37.29  Aligned_cols=37  Identities=41%  Similarity=0.553  Sum_probs=31.7

Q ss_pred             cccCCeEEEEcCCChhHHHHHHHHHHcCCceEEEEecCC
Q 017760            8 GIEGKTFLVTGGLGHVGSALCLELVRRGAYQVRAFDLRT   46 (366)
Q Consensus         8 ~~~~~~VlITGgtGfiG~~L~~~L~~~g~~~V~~~dr~~   46 (366)
                      ..++++|+|- |.|-+|+++++.|.+.|. +|++.|.++
T Consensus        24 ~L~gk~v~Iq-G~G~VG~~~A~~L~~~Ga-kvvv~d~d~   60 (201)
T d1c1da1          24 SLDGLTVLVQ-GLGAVGGSLASLAAEAGA-QLLVADTDT   60 (201)
T ss_dssp             CSTTCEEEEE-CCSHHHHHHHHHHHHTTC-EEEEECSCH
T ss_pred             CCCCCEEEEE-CCCHHHHHHHHHHHHCCC-EEEEecchH
Confidence            3567899998 599999999999999996 899887653

>d2voua1 c.3.1.2 (A:2-163,A:292-394) Dihydroxypyridine hydroxylase DhpH {Arthrobacter nicotinovorans [TaxId: 29320]}

class: Alpha and beta proteins (a/b)
fold: FAD/NAD(P)-binding domain
superfamily: FAD/NAD(P)-binding domain
family: FAD-linked reductases, N-terminal domain
domain: Dihydroxypyridine hydroxylase DhpH
species: Arthrobacter nicotinovorans [TaxId: 29320]

Probab=83.81  E-value=0.69  Score=38.14  Aligned_cols=35  Identities=20%  Similarity=0.252  Sum_probs=30.6

Q ss_pred             CCeEEEEcCCChhHHHHHHHHHHcCCceEEEEecCCC
Q 017760           11 GKTFLVTGGLGHVGSALCLELVRRGAYQVRAFDLRTN   47 (366)
Q Consensus        11 ~~~VlITGgtGfiG~~L~~~L~~~g~~~V~~~dr~~~   47 (366)
                      .+||+|. |+|..|..++..|.++|. +|+++++++.
T Consensus         4 ~~kV~Ii-GaG~aGl~~A~~L~~~G~-~v~v~Er~~~   38 (265)
T d2voua1           4 TDRIAVV-GGSISGLTAALMLRDAGV-DVDVYERSPQ   38 (265)
T ss_dssp             CSEEEEE-CCSHHHHHHHHHHHHTTC-EEEEECSSSS
T ss_pred             CCcEEEE-CcCHHHHHHHHHHHHCCC-CEEEEeCCCC
Confidence            4689998 779999999999999995 9999998653

>d1seza1 c.3.1.2 (A:13-329,A:442-497) Protoporphyrinogen oxidase {Tobacco (Nicotiana tabacum) [TaxId: 4097]}

class: Alpha and beta proteins (a/b)
fold: FAD/NAD(P)-binding domain
superfamily: FAD/NAD(P)-binding domain
family: FAD-linked reductases, N-terminal domain
domain: Protoporphyrinogen oxidase
species: Tobacco (Nicotiana tabacum) [TaxId: 4097]

Probab=83.46  E-value=0.58  Score=38.91  Aligned_cols=35  Identities=29%  Similarity=0.383  Sum_probs=30.4

Q ss_pred             CCeEEEEcCCChhHHHHHHHHHHcCCceEEEEecCCC
Q 017760           11 GKTFLVTGGLGHVGSALCLELVRRGAYQVRAFDLRTN   47 (366)
Q Consensus        11 ~~~VlITGgtGfiG~~L~~~L~~~g~~~V~~~dr~~~   47 (366)
                      +|||+|. |+|.-|-..+..|.+.|+ +|.+++.++.
T Consensus         1 ~KkV~II-GaG~aGL~aA~~La~~G~-~V~vlE~~~~   35 (373)
T d1seza1           1 AKRVAVI-GAGVSGLAAAYKLKIHGL-NVTVFEAEGK   35 (373)
T ss_dssp             CCEEEEE-CCSHHHHHHHHHHHTTSC-EEEEECSSSS
T ss_pred             CCEEEEE-CcCHHHHHHHHHHHhCCC-CEEEEeCCCC
Confidence            4789998 789999999999999995 9999987653

>d1qp8a1 c.2.1.4 (A:83-263) Putative formate dehydrogenase {Archaeon Pyrobaculum aerophilum [TaxId: 13773]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Formate/glycerate dehydrogenases, NAD-domain
domain: Putative formate dehydrogenase
species: Archaeon Pyrobaculum aerophilum [TaxId: 13773]

Probab=83.14  E-value=1  Score=35.76  Aligned_cols=38  Identities=37%  Similarity=0.576  Sum_probs=32.9

Q ss_pred             ccCCeEEEEcCCChhHHHHHHHHHHcCCceEEEEecCCCC
Q 017760            9 IEGKTFLVTGGLGHVGSALCLELVRRGAYQVRAFDLRTNS   48 (366)
Q Consensus         9 ~~~~~VlITGgtGfiG~~L~~~L~~~g~~~V~~~dr~~~~   48 (366)
                      ..+++|.|. |.|-+|+.+++.+..-|. +|+++|+.+..
T Consensus        40 l~gk~vgIi-G~G~IG~~va~~l~~~g~-~v~~~d~~~~~   77 (181)
T d1qp8a1          40 IQGEKVAVL-GLGEIGTRVGKILAALGA-QVRGFSRTPKE   77 (181)
T ss_dssp             CTTCEEEEE-SCSTHHHHHHHHHHHTTC-EEEEECSSCCC
T ss_pred             ccCceEEEe-ccccccccceeeeecccc-ccccccccccc
Confidence            567899999 778899999999999996 89999987643

>d1r0ka2 c.2.1.3 (A:3-126,A:265-290) 1-deoxy-D-xylulose-5-phosphate reductoisomerase {Zymomonas mobilis [TaxId: 542]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Glyceraldehyde-3-phosphate dehydrogenase-like, N-terminal domain
domain: 1-deoxy-D-xylulose-5-phosphate reductoisomerase
species: Zymomonas mobilis [TaxId: 542]

Probab=82.92  E-value=0.62  Score=35.96  Aligned_cols=38  Identities=29%  Similarity=0.319  Sum_probs=30.6

Q ss_pred             CCeEEEEcCCChhHHHHHHHHHHcC-CceEEEEecCCCC
Q 017760           11 GKTFLVTGGLGHVGSALCLELVRRG-AYQVRAFDLRTNS   48 (366)
Q Consensus        11 ~~~VlITGgtGfiG~~L~~~L~~~g-~~~V~~~dr~~~~   48 (366)
                      +++|.|.|+||-||....+-+.+.. ..+|.++.-....
T Consensus         2 pK~I~IlGsTGSIG~~tL~Vi~~~~d~f~v~~lsa~~N~   40 (150)
T d1r0ka2           2 PRTVTVLGATGSIGHSTLDLIERNLDRYQVIALTANRNV   40 (150)
T ss_dssp             CEEEEEETTTSHHHHHHHHHHHHTGGGEEEEEEEESSCH
T ss_pred             CcEEEEECCCcHHHHHHHHHHHcCCCCcEEEEEEeCCCH
Confidence            4789999999999999999887752 2489998776543

>d1ojta2 c.3.1.5 (A:276-400) Dihydrolipoamide dehydrogenase {Neisseria meningitidis [TaxId: 487]}

class: Alpha and beta proteins (a/b)
fold: FAD/NAD(P)-binding domain
superfamily: FAD/NAD(P)-binding domain
family: FAD/NAD-linked reductases, N-terminal and central domains
domain: Dihydrolipoamide dehydrogenase
species: Neisseria meningitidis [TaxId: 487]

Probab=82.78  E-value=0.79  Score=33.99  Aligned_cols=35  Identities=14%  Similarity=0.282  Sum_probs=30.2

Q ss_pred             CCeEEEEcCCChhHHHHHHHHHHcCCceEEEEecCCC
Q 017760           11 GKTFLVTGGLGHVGSALCLELVRRGAYQVRAFDLRTN   47 (366)
Q Consensus        11 ~~~VlITGgtGfiG~~L~~~L~~~g~~~V~~~dr~~~   47 (366)
                      .++++|. |+|++|-.++..|.+.|. +|+.+.+.+.
T Consensus        26 p~~vvIi-GgG~IG~E~A~~~~~~G~-~Vtive~~~~   60 (125)
T d1ojta2          26 PGKLLII-GGGIIGLEMGTVYSTLGS-RLDVVEMMDG   60 (125)
T ss_dssp             CSEEEEE-SCSHHHHHHHHHHHHHTC-EEEEECSSSS
T ss_pred             CCeEEEE-CCCHHHHHHHHHhhcCCC-EEEEEEeecc
Confidence            3678888 789999999999999995 9999988753

>d1pj5a2 c.3.1.2 (A:4-219,A:339-427) N,N-dimethylglycine oxidase {Arthrobacter globiformis [TaxId: 1665]}

class: Alpha and beta proteins (a/b)
fold: FAD/NAD(P)-binding domain
superfamily: FAD/NAD(P)-binding domain
family: FAD-linked reductases, N-terminal domain
domain: N,N-dimethylglycine oxidase
species: Arthrobacter globiformis [TaxId: 1665]

Probab=82.08  E-value=0.66  Score=39.47  Aligned_cols=33  Identities=33%  Similarity=0.522  Sum_probs=28.9

Q ss_pred             eEEEEcCCChhHHHHHHHHHHcCCceEEEEecCC
Q 017760           13 TFLVTGGLGHVGSALCLELVRRGAYQVRAFDLRT   46 (366)
Q Consensus        13 ~VlITGgtGfiG~~L~~~L~~~g~~~V~~~dr~~   46 (366)
                      +|+|. |+|.+|...+.+|.++|.++|.+++++.
T Consensus         3 dViII-GaGi~G~s~A~~La~~G~~~V~liE~~~   35 (305)
T d1pj5a2           3 RIVII-GAGIVGTNLADELVTRGWNNITVLDQGP   35 (305)
T ss_dssp             CEEEE-CCSHHHHHHHHHHHHTTCCCEEEECSSC
T ss_pred             CEEEE-CcCHHHHHHHHHHHHcCCCcEEEEeCCC
Confidence            57887 7799999999999999965799999875

>d1uufa2 c.2.1.1 (A:145-312) Hypothetical protein YahK {Escherichia coli [TaxId: 562]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Alcohol dehydrogenase-like, C-terminal domain
domain: Hypothetical protein YahK
species: Escherichia coli [TaxId: 562]

Probab=81.96  E-value=0.81  Score=35.54  Aligned_cols=37  Identities=30%  Similarity=0.200  Sum_probs=30.6

Q ss_pred             ccCCeEEEEcCCChhHHHHHHHHHHcCCceEEEEecCCC
Q 017760            9 IEGKTFLVTGGLGHVGSALCLELVRRGAYQVRAFDLRTN   47 (366)
Q Consensus         9 ~~~~~VlITGgtGfiG~~L~~~L~~~g~~~V~~~dr~~~   47 (366)
                      .++.+|+|.|+ |-+|...++.+...|. +|++++.++.
T Consensus        29 ~~G~~VlI~Ga-G~vG~~a~qlak~~Ga-~~i~~~~~~~   65 (168)
T d1uufa2          29 GPGKKVGVVGI-GGLGHMGIKLAHAMGA-HVVAFTTSEA   65 (168)
T ss_dssp             CTTCEEEEECC-SHHHHHHHHHHHHTTC-EEEEEESSGG
T ss_pred             CCCCEEEEecc-chHHHHHHHHhhcccc-cchhhccchh
Confidence            35689999986 8899999999998996 7888887654

>d1dxla2 c.3.1.5 (A:153-275) Dihydrolipoamide dehydrogenase {Garden pea (Pisum sativum) [TaxId: 3888]}

class: Alpha and beta proteins (a/b)
fold: FAD/NAD(P)-binding domain
superfamily: FAD/NAD(P)-binding domain
family: FAD/NAD-linked reductases, N-terminal and central domains
domain: Dihydrolipoamide dehydrogenase
species: Garden pea (Pisum sativum) [TaxId: 3888]

Probab=81.95  E-value=0.7  Score=34.10  Aligned_cols=34  Identities=24%  Similarity=0.410  Sum_probs=29.6

Q ss_pred             CeEEEEcCCChhHHHHHHHHHHcCCceEEEEecCCC
Q 017760           12 KTFLVTGGLGHVGSALCLELVRRGAYQVRAFDLRTN   47 (366)
Q Consensus        12 ~~VlITGgtGfiG~~L~~~L~~~g~~~V~~~dr~~~   47 (366)
                      ++++|. |+|++|-.++..|.+.|. +|+.+.+.+.
T Consensus        26 ~~~vii-G~G~iglE~A~~~~~~G~-~Vtvi~~~~~   59 (123)
T d1dxla2          26 KKLVVI-GAGYIGLEMGSVWGRIGS-EVTVVEFASE   59 (123)
T ss_dssp             SEEEES-CCSHHHHHHHHHHHHHTC-EEEEECSSSS
T ss_pred             CeEEEE-ccchHHHHHHHHHHhcCC-eEEEEEEccc
Confidence            577777 789999999999999995 9999988764

>d1fcda1 c.3.1.5 (A:1-114,A:256-327) Flavocytochrome c sulfide dehydrogenase, FCSD, flavin-binding subunit {Purple phototrophic bacterium (Chromatium vinosum) [TaxId: 1049]}

class: Alpha and beta proteins (a/b)
fold: FAD/NAD(P)-binding domain
superfamily: FAD/NAD(P)-binding domain
family: FAD/NAD-linked reductases, N-terminal and central domains
domain: Flavocytochrome c sulfide dehydrogenase, FCSD, flavin-binding subunit
species: Purple phototrophic bacterium (Chromatium vinosum) [TaxId: 1049]

Probab=81.88  E-value=0.89  Score=34.87  Aligned_cols=35  Identities=20%  Similarity=0.274  Sum_probs=28.8

Q ss_pred             CCeEEEEcCCChhHHHHHHHHHHcCC-ceEEEEecCC
Q 017760           11 GKTFLVTGGLGHVGSALCLELVRRGA-YQVRAFDLRT   46 (366)
Q Consensus        11 ~~~VlITGgtGfiG~~L~~~L~~~g~-~~V~~~dr~~   46 (366)
                      ++||+|. |+|+.|-.++..|.+.+. .+|+++++++
T Consensus         2 gkrivIv-GgG~~G~e~A~~l~~~~~~~~Vtlie~~~   37 (186)
T d1fcda1           2 GRKVVVV-GGGTGGATAAKYIKLADPSIEVTLIEPNT   37 (186)
T ss_dssp             CCEEEEE-CCSHHHHHHHHHHHHHCTTSEEEEECSCS
T ss_pred             CCcEEEE-CccHHHHHHHHHHHHcCCCCcEEEEECCC
Confidence            6899999 779999999999999872 2688887664

>d1jw9b_ c.111.1.1 (B:) Molybdenum cofactor biosynthesis protein MoeB {Escherichia coli [TaxId: 562]}

class: Alpha and beta proteins (a/b)
fold: Activating enzymes of the ubiquitin-like proteins
superfamily: Activating enzymes of the ubiquitin-like proteins
family: Molybdenum cofactor biosynthesis protein MoeB
domain: Molybdenum cofactor biosynthesis protein MoeB
species: Escherichia coli [TaxId: 562]

Probab=81.79  E-value=0.58  Score=39.00  Aligned_cols=37  Identities=27%  Similarity=0.456  Sum_probs=31.2

Q ss_pred             ccCCeEEEEcCCChhHHHHHHHHHHcCCceEEEEecCC
Q 017760            9 IEGKTFLVTGGLGHVGSALCLELVRRGAYQVRAFDLRT   46 (366)
Q Consensus         9 ~~~~~VlITGgtGfiG~~L~~~L~~~g~~~V~~~dr~~   46 (366)
                      .+..+|+|.| .|-+|++++..|.+.|..+++++|-..
T Consensus        28 L~~~~VliiG-~GglGs~va~~La~~Gvg~i~lvD~D~   64 (247)
T d1jw9b_          28 LKDSRVLIVG-LGGLGCAASQYLASAGVGNLTLLDFDT   64 (247)
T ss_dssp             HHHCEEEEEC-CSHHHHHHHHHHHHHTCSEEEEECCCB
T ss_pred             HhCCCEEEEC-CCHHHHHHHHHHHHcCCCeEEEECCcc
Confidence            4467999996 566999999999999988899998653

>d1ne2a_ c.66.1.32 (A:) Hypothetical protein Ta1320 {Archaeon Thermoplasma acidophilum [TaxId: 2303]}

class: Alpha and beta proteins (a/b)
fold: S-adenosyl-L-methionine-dependent methyltransferases
superfamily: S-adenosyl-L-methionine-dependent methyltransferases
family: Ta1320-like
domain: Hypothetical protein Ta1320
species: Archaeon Thermoplasma acidophilum [TaxId: 2303]

Probab=81.47  E-value=1.3  Score=35.68  Aligned_cols=75  Identities=21%  Similarity=0.223  Sum_probs=47.3

Q ss_pred             cccCCeEEEEc-CCChhHHHHHHHHHHcCCceEEEEecCCCCcccccccCCCeEEEEccccCCCCCceEEEEeCCccccC
Q 017760            8 GIEGKTFLVTG-GLGHVGSALCLELVRRGAYQVRAFDLRTNSPWSHLLINHGVHCIQGLRKNNRKCLYTCAVRPAAIYGP   86 (366)
Q Consensus         8 ~~~~~~VlITG-gtGfiG~~L~~~L~~~g~~~V~~~dr~~~~~~~~~~~~~~v~~i~gDks~~~~~l~~~ilRp~~iyGp   86 (366)
                      ...+++|+=.| |||.+|    ..+...|..+|+++|.++..-.......++++++.+|-..-...+++++..|+  ||.
T Consensus        46 dl~Gk~VLDlGcGtG~l~----i~a~~~ga~~V~~vDid~~a~~~ar~N~~~~~~~~~D~~~l~~~fD~Vi~NPP--fg~  119 (197)
T d1ne2a_          46 NIGGRSVIDAGTGNGILA----CGSYLLGAESVTAFDIDPDAIETAKRNCGGVNFMVADVSEISGKYDTWIMNPP--FGS  119 (197)
T ss_dssp             SSBTSEEEEETCTTCHHH----HHHHHTTBSEEEEEESCHHHHHHHHHHCTTSEEEECCGGGCCCCEEEEEECCC--C--
T ss_pred             CCCCCEEEEeCCCCcHHH----HHHHHcCCCcccccccCHHHHHHHHHccccccEEEEehhhcCCcceEEEeCcc--cch
Confidence            35678888655 566554    33555665579999987643322222346789999994444567899999997  665


Q ss_pred             CC
Q 017760           87 GE   88 (366)
Q Consensus        87 ~~   88 (366)
                      ..
T Consensus       120 ~~  121 (197)
T d1ne2a_         120 VV  121 (197)
T ss_dssp             --
T ss_pred             hh
Confidence            43

>d1dxya1 c.2.1.4 (A:101-299) D-2-hydroxyisocaproate dehydrogenase {Lactobacillus casei [TaxId: 1582]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Formate/glycerate dehydrogenases, NAD-domain
domain: D-2-hydroxyisocaproate dehydrogenase
species: Lactobacillus casei [TaxId: 1582]

Probab=80.91  E-value=1.2  Score=35.80  Aligned_cols=38  Identities=29%  Similarity=0.334  Sum_probs=32.4

Q ss_pred             ccCCeEEEEcCCChhHHHHHHHHHHcCCceEEEEecCCCC
Q 017760            9 IEGKTFLVTGGLGHVGSALCLELVRRGAYQVRAFDLRTNS   48 (366)
Q Consensus         9 ~~~~~VlITGgtGfiG~~L~~~L~~~g~~~V~~~dr~~~~   48 (366)
                      ..+++|.|. |.|-||+.+++.|..-|. +|++.|+....
T Consensus        43 l~~ktvgIi-G~G~IG~~va~~l~~fg~-~v~~~d~~~~~   80 (199)
T d1dxya1          43 LGQQTVGVM-GTGHIGQVAIKLFKGFGA-KVIAYDPYPMK   80 (199)
T ss_dssp             GGGSEEEEE-CCSHHHHHHHHHHHHTTC-EEEEECSSCCS
T ss_pred             ccceeeeee-ecccccccccccccccce-eeeccCCccch
Confidence            456889988 899999999999999996 89999986543

>d1b5qa1 c.3.1.2 (A:5-293,A:406-463) Polyamine oxidase {Maize (Zea mays) [TaxId: 4577]}

class: Alpha and beta proteins (a/b)
fold: FAD/NAD(P)-binding domain
superfamily: FAD/NAD(P)-binding domain
family: FAD-linked reductases, N-terminal domain
domain: Polyamine oxidase
species: Maize (Zea mays) [TaxId: 4577]

Probab=80.85  E-value=0.78  Score=37.02  Aligned_cols=34  Identities=18%  Similarity=0.298  Sum_probs=29.3

Q ss_pred             eEEEEcCCChhHHHHHHHHHHcCCceEEEEecCCC
Q 017760           13 TFLVTGGLGHVGSALCLELVRRGAYQVRAFDLRTN   47 (366)
Q Consensus        13 ~VlITGgtGfiG~~L~~~L~~~g~~~V~~~dr~~~   47 (366)
                      +|+|. |+|.-|-..+..|.++|+++|+++++++.
T Consensus         2 ~V~II-GaG~aGL~aA~~L~~~G~~~V~vlE~~~~   35 (347)
T d1b5qa1           2 RVIVV-GAGMSGISAAKRLSEAGITDLLILEATDH   35 (347)
T ss_dssp             CEEEE-CCBHHHHHHHHHHHHTTCCCEEEECSSSS
T ss_pred             CEEEE-CCcHHHHHHHHHHHhCCCCcEEEEECCCC
Confidence            68888 78999999999999999657999988653

>d2iida1 c.3.1.2 (A:4-319,A:433-486) L-aminoacid oxidase {Malayan pit viper (Calloselasma rhodostoma) [TaxId: 8717]}

class: Alpha and beta proteins (a/b)
fold: FAD/NAD(P)-binding domain
superfamily: FAD/NAD(P)-binding domain
family: FAD-linked reductases, N-terminal domain
domain: L-aminoacid oxidase
species: Malayan pit viper (Calloselasma rhodostoma) [TaxId: 8717]

Probab=80.83  E-value=0.85  Score=38.59  Aligned_cols=36  Identities=22%  Similarity=0.348  Sum_probs=31.0

Q ss_pred             cCCeEEEEcCCChhHHHHHHHHHHcCCceEEEEecCCC
Q 017760           10 EGKTFLVTGGLGHVGSALCLELVRRGAYQVRAFDLRTN   47 (366)
Q Consensus        10 ~~~~VlITGgtGfiG~~L~~~L~~~g~~~V~~~dr~~~   47 (366)
                      +.++|+|. |+|..|-..+..|.++| ++|.+++.++.
T Consensus        29 ~pkkV~II-GaG~aGLsaA~~L~~~G-~~V~vlE~~~~   64 (370)
T d2iida1          29 NPKHVVIV-GAGMAGLSAAYVLAGAG-HQVTVLEASER   64 (370)
T ss_dssp             SCCEEEEE-CCBHHHHHHHHHHHHHT-CEEEEECSSSS
T ss_pred             CCCeEEEE-CCCHHHHHHHHHHHHCC-CCEEEEeCCCC
Confidence            34689998 78999999999999999 59999987653

>d1gu7a2 c.2.1.1 (A:161-349) 2,4-dienoyl-CoA reductase {Yeast (Candida tropicalis) [TaxId: 5482]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Alcohol dehydrogenase-like, C-terminal domain
domain: 2,4-dienoyl-CoA reductase
species: Yeast (Candida tropicalis) [TaxId: 5482]

Probab=80.52  E-value=0.93  Score=36.00  Aligned_cols=38  Identities=16%  Similarity=0.108  Sum_probs=31.1

Q ss_pred             cCCeEEE-EcCCChhHHHHHHHHHHcCCceEEEEecCCCC
Q 017760           10 EGKTFLV-TGGLGHVGSALCLELVRRGAYQVRAFDLRTNS   48 (366)
Q Consensus        10 ~~~~VlI-TGgtGfiG~~L~~~L~~~g~~~V~~~dr~~~~   48 (366)
                      ++.+++| +||+|-+|...++.....|. +|+++.++++.
T Consensus        28 ~g~~vli~~ga~g~vG~~aiqlAk~~Ga-~vI~~v~~~~~   66 (189)
T d1gu7a2          28 PGKDWFIQNGGTSAVGKYASQIGKLLNF-NSISVIRDRPN   66 (189)
T ss_dssp             TTTCEEEESCTTSHHHHHHHHHHHHHTC-EEEEEECCCTT
T ss_pred             CCCEEEEEeCCCchHHHHHHHHHhhcCC-eEEEEEecccc
Confidence            3566777 69999999999999999996 89998876543

>d2gv8a1 c.3.1.5 (A:3-180,A:288-444) Flavin-dependent monoxygenase SPBP16F5.08c {Schizosaccharomyces pombe [TaxId: 4896]}

class: Alpha and beta proteins (a/b)
fold: FAD/NAD(P)-binding domain
superfamily: FAD/NAD(P)-binding domain
family: FAD/NAD-linked reductases, N-terminal and central domains
domain: Flavin-dependent monoxygenase SPBP16F5.08c
species: Schizosaccharomyces pombe [TaxId: 4896]

Probab=80.42  E-value=1  Score=38.99  Aligned_cols=39  Identities=23%  Similarity=0.264  Sum_probs=32.0

Q ss_pred             ccCCeEEEEcCCChhHHHHHHHHHHcCC-ceEEEEecCCCC
Q 017760            9 IEGKTFLVTGGLGHVGSALCLELVRRGA-YQVRAFDLRTNS   48 (366)
Q Consensus         9 ~~~~~VlITGgtGfiG~~L~~~L~~~g~-~~V~~~dr~~~~   48 (366)
                      ..+++|+|. |+|.-|-..+..|++.|. ++|+++.++...
T Consensus         2 ~~~KrVaII-GaG~sGl~~A~~L~~~~~~~~v~vfEk~~~i   41 (335)
T d2gv8a1           2 PTIRKIAII-GAGPSGLVTAKALLAEKAFDQVTLFERRGSP   41 (335)
T ss_dssp             CSCCEEEEE-CCSHHHHHHHHHHHTTTCCSEEEEECSSSSS
T ss_pred             CCCCeEEEE-CcCHHHHHHHHHHHHhCCCCCEEEEECCCCC
Confidence            456889999 789999999999988762 589999988643

>d1j4aa1 c.2.1.4 (A:104-300) D-lactate dehydrogenase {Lactobacillus helveticus [TaxId: 1587]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Formate/glycerate dehydrogenases, NAD-domain
domain: D-lactate dehydrogenase
species: Lactobacillus helveticus [TaxId: 1587]

Probab=80.34  E-value=1.2  Score=35.86  Aligned_cols=37  Identities=27%  Similarity=0.458  Sum_probs=32.2

Q ss_pred             ccCCeEEEEcCCChhHHHHHHHHHHcCCceEEEEecCCC
Q 017760            9 IEGKTFLVTGGLGHVGSALCLELVRRGAYQVRAFDLRTN   47 (366)
Q Consensus         9 ~~~~~VlITGgtGfiG~~L~~~L~~~g~~~V~~~dr~~~   47 (366)
                      ..+++|.|. |.|-||+.+++.|..-|. +|++.|+...
T Consensus        41 l~gk~vgIi-G~G~IG~~va~~l~~fg~-~V~~~d~~~~   77 (197)
T d1j4aa1          41 VRDQVVGVV-GTGHIGQVFMQIMEGFGA-KVITYDIFRN   77 (197)
T ss_dssp             GGGSEEEEE-CCSHHHHHHHHHHHHTTC-EEEEECSSCC
T ss_pred             ccCCeEEEe-cccccchhHHHhHhhhcc-cccccCcccc
Confidence            457899998 899999999999999996 8999987653