Citrus Sinensis ID: 017816

Local Sequence Feature Prediction

Prediction and (Method)Result
Residue Number Marker
Protein Sequence ?
Secondary Structure (PSIPRED) ?
Secondary Structure Prediction (SSPRO) ?
Coil and Loop (DISEMBL) ?
Flexible Loop (DISEMBL) ?
Low Complexity Region (SEG) ?
Disordered region (IsUnstruct) ?
Disordered Region (DISOPRED) ?
Disordered Region (DISEMBL) ?
Disordered Region (DISPRO) ?
Transmembrane Helix (TMHMM) ?
Transmembrane Helix (HMMTOP) ?
Transmembrane Helix (MEMSAT) ?
TM Helix, Signal Peptide (MEMSAT_SVM) ?
TM Helix, Signal Peptide (Phobius) ?
Signal Peptide (SignalP HMM Mode) ?
Signal Peptide (SignalP NN Mode) ?
Coiled Coils (COILS) ?
Positional Conservation ?
 
--------10--------20--------30--------40--------50--------60--------70--------80--------90-------100-------110-------120-------130-------140-------150-------160-------170-------180-------190-------200-------210-------220-------230-------240-------250-------260-------270-------280-------290-------300-------310-------320-------330-------340-------350-------360-----
MAPVPTFPVKVGQIDDVQELRKVEPSTIPERFVRDLTERPSSLATALSPPAGIPIINLSKLMKGNHDEFHNEILNLATACEEWGFFQVIDHGIELNLLENIEKVAKDFFMLPLEEKKKYPMLPGTVQGYGQAFVFSENQKLDWCNMFALGVEPHFIRNPKLWPAKPAEFSETLETYSRDVRKLCQCLLKYVAISLGLKAETFEEMFGVAVQAVRMNYYPPCPRPDLVLGLSPHSDGSALTVLQQGKGSSVGLQILKNNTWVPVQPIPNALVINVGDTIEVLTNGRYKSVEHRAVTHKEKDRLSIVTFYAPSYEVELGPMPELVNENNPCKYRRYNHGEYSKHYVTNKLQGKKTMEFAKIQTQNST
ccccccccccccccccHHHHHHccccccccccccccccccccccccccccccccEEEccccccccHHHHHHHHHHHHHHHHHccEEEEEcccccHHHHHHHHHHHHHHccccHHHHHHcccccccEEEEccccccccccccccEEEEccEEccccccccccccccccHHHHHHHHHHHHHHHHHHHHHHHHHHHccccHHHHHHHHccccEEEEEccccccccccccccccccccccccEEEEEccccccccEEEEccEEEEcccccccEEEEEccEEEEEEcccccccccEEEccccccEEEEEEEEccccccEEEccccccccccccccccccHHHHHHHHHHcccccccccccccccccccc
cccccccccccccccHHHHHHHcccccccHHcEcccccccccccccccccccccEEEHHHcccccHHHHHHHHHHHHHHHHHcccEEEEcccccHHHHHHHHHHHHHHHcccHHHHHHHHccccccEEEEEEEEEEccccccHHHHEEEEEcccHcccccccccccHHHHHHHHHHHHHHHHHHHHHHHHHHHHccccHHHHHHHHcccccEEEEEEEcccccccccccEEEEcccccEEEEEEcccccccEEEEEccEEEEcccccccEEEEEcHHHHHHcccccccccEEEcccccccEEEEEEEEEcccccEEcccHHHcccccccccccccHHHHHHHHHHcccccHHHHHHHHHHHHccc
mapvptfpvkvgqiddvqelrkvepstiperFVRDlterpsslatalsppagipiinlsklmkgnhDEFHNEILNLATACEEWGFFQVIDHGIELNLLENIEKVAKDFFmlpleekkkypmlpgtvqgygQAFVfsenqkldwcnmfalgvephfirnpklwpakpaefsETLETYSRDVRKLCQCLLKYVAISLGLKAETFEEMFGVAVQAVRmnyyppcprpdlvlglsphsdgsaltvlqqgkgssvglqilknntwvpvqpipnalvinvGDTIevltngryksvehravthkekdrlsivtfyapsyevelgpmpelvnennpckyrrynhgeyskhyvtnklqgkkTMEFAKIQTQNST
mapvptfpvkvgqiddvqelrkvepstiperfvrdLTERpsslatalsppagIPIINLSKLMKGNHDEFHNEILNLATACEEWGFFQVIDHGIELNLLENIEKVAKDFFMLPLEEKKKYPMLPGTVQGYGQAFVFSENQKLDWCNMFALGVEPHFIRNPKLWPAKPAEFSETLETYSRDVRKLCQCLLKYVAISLGLKAETFEEMFGVAVQAVRMNYYPPCPRPDLVLGLSPHSDGSALTVLQQGKGSSVGLQILKNNTWVPVQPIPNALVINVGDTIEVLTNgryksvehravthkekdrlsiVTFYAPSYEVELGPMPELVNENNPCKYRRYNHGEYSKHYvtnklqgkktMEFAkiqtqnst
MAPVPTFPVKVGQIDDVQELRKVEPSTIPERFVRDLTERPSSLATALSPPAGIPIINLSKLMKGNHDEFHNEILNLATACEEWGFFQVIDHGIELNLLENIEKVAKDFFMLPLEEKKKYPMLPGTVQGYGQAFVFSENQKLDWCNMFALGVEPHFIRNPKLWPAKPAEFSETLETYSRDVRKLCQCLLKYVAISLGLKAETFEEMFGVAVQAVRMNYYPPCPRPDLVLGLSPHSDGSALTVLQQGKGSSVGLQILKNNTWVPVQPIPNALVINVGDTIEVLTNGRYKSVEHRAVTHKEKDRLSIVTFYAPSYEVELGPMPELVNENNPCKYRRYNHGEYSKHYVTNKLQGKKTMEFAKIQTQNST
**************************************************AGIPIINLSKLMKGNHDEFHNEILNLATACEEWGFFQVIDHGIELNLLENIEKVAKDFFMLPLEEKKKYPMLPGTVQGYGQAFVFSENQKLDWCNMFALGVEPHFIRNPKLWPAKPAEFSETLETYSRDVRKLCQCLLKYVAISLGLKAETFEEMFGVAVQAVRMNYYPPCPRPDLVLGLSPH**GSALTVLQQGKGSSVGLQILKNNTWVPVQPIPNALVINVGDTIEVLTNGRYKSVEHRAVTHKEKDRLSIVTFYAPSYEVELGPMPELVNENNPCKYRRYNHGEYSKHYVTNK******************
*******************LRK**PSTIPERFVRDLTER*********PPAGIPIINLSKLMKGN*DEFHNEILNLATACEEWGFFQVIDHGIELNLLENIEKVAKDFFMLPLEEKKKYPMLPGTVQGYGQAFVFSENQKLDWCNMFALGVEPHFIRNPKLWPAKPAEFSETLETYSRDVRKLCQCLLKYVAISLGLKAETFEEMFGVAVQAVRMNYYPPCPRPDLVLGLSPHSDGSALTVLQQGKGSSVGLQILKNNTWVPVQPIPNALVINVGDTIEVLTNGRYKSVEHRAVTHKEKDRLSIVTFYAPSYEVELGPMPELVNENNPCKYRRYNHGEYSKHYVTNKLQGKKTME***I******
MAPVPTFPVKVGQIDDVQELRKVEPSTIPERFVRDLTERPSSLATALSPPAGIPIINLSKLMKGNHDEFHNEILNLATACEEWGFFQVIDHGIELNLLENIEKVAKDFFMLPLEEKKKYPMLPGTVQGYGQAFVFSENQKLDWCNMFALGVEPHFIRNPKLWPAKPAEFSETLETYSRDVRKLCQCLLKYVAISLGLKAETFEEMFGVAVQAVRMNYYPPCPRPDLVLGLSPHSDGSALTVLQQGKGSSVGLQILKNNTWVPVQPIPNALVINVGDTIEVLTNGRYKSVEHRAVTHKEKDRLSIVTFYAPSYEVELGPMPELVNENNPCKYRRYNHGEYSKHYVTNKLQGKKTMEFA********
***********GQIDDVQELRKVEPSTIPERFVRDLTERPSSLATALSPPAGIPIINLSKLMKGNHDEFHNEILNLATACEEWGFFQVIDHGIELNLLENIEKVAKDFFMLPLEEKKKYPMLPGTVQGYGQAFVFSENQKLDWCNMFALGVEPHFIRNPKLWPAKPAEFSETLETYSRDVRKLCQCLLKYVAISLGLKAETFEEMFGVAVQAVRMNYYPPCPRPDLVLGLSPHSDGSALTVLQQGKGSSVGLQILKNNTWVPVQPIPNALVINVGDTIEVLTNGRYKSVEHRAVTHKEKDRLSIVTFYAPSYEVELGPMPELVNENNPCKYRRYNHGEYSKHYVTNKLQGKKTMEFAKIQT****
ooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooo
ooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooo
oooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooohhhhhhhhhhhhhhhhhhhhiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiii
oooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooohhhhhhhhhhhhhhhhiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiii
ooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooo
xxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxx
xxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxx
MAPVPTFPVKVGQIDDVQELRKVEPSTIPERFVRDLTERPSSLATALSPPAGIPIINLSKLMKGNHDEFHNEILNLATACEEWGFFQVIDHGIELNLLENIEKVAKDFFMLPLEEKKKYPMLPGTVQGYGQAFVFSENQKLDWCNMFALGVEPHFIRNPKLWPAKPAEFSETLETYSRDVRKLCQCLLKYVAISLGLKAETFEEMFGVAVQAVRMNYYPPCPRPDLVLGLSPHSDGSALTVLQQGKGSSVGLQILKNNTWVPVQPIPNALVINVGDTIEVLTNGRYKSVEHRAVTHKEKDRLSIVTFYAPSYEVELGPMPELVNENNPCKYRRYNHGEYSKHYVTNKLQGKKTMEFAKIQTQNST
no confident homologs detected

Close Homologs for Annotation Transfer

Close Homologs in SWISS-PROT Database Detected by BLAST ?

Original result of BLAST against SWISS-PROT Database

ID ?Alignment graph ?Length ? Definition ? RBH(Q2H) ? RBH(H2Q) ? Q cover ? H cover ? Identity ? E-value ?
Query365 2.2.26 [Sep-21-2011]
Q39224358 Protein SRG1 OS=Arabidops no no 0.920 0.938 0.424 1e-78
D4N502360 Codeine O-demethylase OS= N/A no 0.958 0.972 0.388 5e-73
D4N501364 Probable 2-oxoglutarate/F N/A no 0.945 0.947 0.390 2e-72
D4N500364 Thebaine 6-O-demethylase N/A no 0.945 0.947 0.385 2e-68
A2A1A0352 S-norcoclaurine synthase N/A no 0.928 0.963 0.390 6e-66
Q9ZWQ9335 Flavonol synthase/flavano N/A no 0.873 0.952 0.371 1e-55
Q41452349 Flavonol synthase/flavano N/A no 0.832 0.871 0.354 1e-53
Q9M547334 Flavonol synthase/flavano N/A no 0.876 0.958 0.353 1e-53
Q07512348 Flavonol synthase/flavano N/A no 0.884 0.928 0.347 3e-53
Q96330336 Flavonol synthase/flavano no no 0.835 0.907 0.364 1e-52
>sp|Q39224|SRG1_ARATH Protein SRG1 OS=Arabidopsis thaliana GN=SRG1 PE=2 SV=1 Back     alignment and function desciption
 Score =  293 bits (750), Expect = 1e-78,   Method: Compositional matrix adjust.
 Identities = 148/349 (42%), Positives = 220/349 (63%), Gaps = 13/349 (3%)

Query: 17  VQELRKVEP-STIPERFVR---DLTERPSSLATALSPPAGIPIINLSKLMKGNHDEFHNE 72
           VQE+ K +  +T+P R+VR   D TE        +     IPII++ +L         +E
Sbjct: 17  VQEMVKEKTITTVPPRYVRSDQDKTEVDDDFDVKIE----IPIIDMKRLCSSTT--MDSE 70

Query: 73  ILNLATACEEWGFFQVIDHGIELNLLENIEKVAKDFFMLPLEEKKKYPMLPGTVQGYGQA 132
           +  L  AC+EWGFFQ+++HGI+ + L+ ++   +DFF LP+EEKKK+   P  ++G+GQA
Sbjct: 71  VEKLDFACKEWGFFQLVNHGIDSSFLDKVKSEIQDFFNLPMEEKKKFWQRPDEIEGFGQA 130

Query: 133 FVFSENQKLDWCNMFALGVEPHFIRNPKLWPAKPAEFSETLETYSRDVRKLCQCLLKYVA 192
           FV SE+QKLDW ++F   V+P  +R P L+P  P  F +TLE YS +V+ + + L+  +A
Sbjct: 131 FVVSEDQKLDWADLFFHTVQPVELRKPHLFPKLPLPFRDTLEMYSSEVQSVAKILIAKMA 190

Query: 193 ISLGLKAETFEEMFG--VAVQAVRMNYYPPCPRPDLVLGLSPHSDGSALTVLQQGKGSSV 250
            +L +K E  E++F    +VQ++RMNYYPPCP+PD V+GL+PHSD   LTVL Q      
Sbjct: 191 RALEIKPEELEKLFDDVDSVQSMRMNYYPPCPQPDQVIGLTPHSDSVGLTVLMQVNDVE- 249

Query: 251 GLQILKNNTWVPVQPIPNALVINVGDTIEVLTNGRYKSVEHRAVTHKEKDRLSIVTFYAP 310
           GLQI K+  WVPV+P+PNA ++N+GD +E++TNG Y+S+EHR V + EK+RLSI TF+  
Sbjct: 250 GLQIKKDGKWVPVKPLPNAFIVNIGDVLEIITNGTYRSIEHRGVVNSEKERLSIATFHNV 309

Query: 311 SYEVELGPMPELVNENNPCKYRRYNHGEYSKHYVTNKLQGKKTMEFAKI 359
               E+GP   LV      +++R    EY+    +  L GK  ++  +I
Sbjct: 310 GMYKEVGPAKSLVERQKVARFKRLTMKEYNDGLFSRTLDGKAYLDALRI 358

Arabidopsis thaliana (taxid: 3702)
>sp|D4N502|DIOX3_PAPSO Codeine O-demethylase OS=Papaver somniferum GN=CODM PE=1 SV=1 Back     alignment and function description
>sp|D4N501|DIOX2_PAPSO Probable 2-oxoglutarate/Fe(II)-dependent dioxygenase OS=Papaver somniferum GN=DIOX2 PE=2 SV=1 Back     alignment and function description
>sp|D4N500|DIOX1_PAPSO Thebaine 6-O-demethylase OS=Papaver somniferum GN=T6ODM PE=1 SV=1 Back     alignment and function description
>sp|A2A1A0|NCS1_COPJA S-norcoclaurine synthase 1 OS=Coptis japonica GN=NCS1 PE=1 SV=1 Back     alignment and function description
>sp|Q9ZWQ9|FLS_CITUN Flavonol synthase/flavanone 3-hydroxylase OS=Citrus unshiu GN=FLS PE=1 SV=1 Back     alignment and function description
>sp|Q41452|FLS_SOLTU Flavonol synthase/flavanone 3-hydroxylase OS=Solanum tuberosum PE=2 SV=1 Back     alignment and function description
>sp|Q9M547|FLS_EUSER Flavonol synthase/flavanone 3-hydroxylase OS=Eustoma exaltatum subsp. russellianum GN=FLS PE=2 SV=1 Back     alignment and function description
>sp|Q07512|FLS_PETHY Flavonol synthase/flavanone 3-hydroxylase OS=Petunia hybrida GN=FL PE=2 SV=1 Back     alignment and function description
>sp|Q96330|FLS1_ARATH Flavonol synthase/flavanone 3-hydroxylase OS=Arabidopsis thaliana GN=FLS1 PE=1 SV=1 Back     alignment and function description

Close Homologs in the Non-Redundant Database Detected by BLAST ?

Original result of BLAST against Nonredundant Database

GI ?Alignment Graph ?Length ? Definition ? Q cover ? H cover ? Identity ? E-value ?
Query365
255551703362 Flavonol synthase/flavanone 3-hydroxylas 0.986 0.994 0.815 1e-177
224110576364 predicted protein [Populus trichocarpa] 0.997 1.0 0.780 1e-176
225432270365 PREDICTED: protein SRG1 [Vitis vinifera] 1.0 1.0 0.750 1e-170
356529759365 PREDICTED: protein SRG1-like [Glycine ma 0.997 0.997 0.758 1e-166
356556124365 PREDICTED: protein SRG1-like [Glycine ma 0.994 0.994 0.749 1e-165
449433391358 PREDICTED: protein SRG1-like [Cucumis sa 0.980 1.0 0.760 1e-163
449495448358 PREDICTED: LOW QUALITY PROTEIN: protein 0.980 1.0 0.757 1e-163
297830846364 oxidoreductase [Arabidopsis lyrata subsp 0.980 0.983 0.721 1e-148
18402992364 oxidoreductase, 2OG-Fe(II) oxygenase fam 0.980 0.983 0.719 1e-146
356563932360 PREDICTED: protein SRG1-like [Glycine ma 0.964 0.977 0.678 1e-145
>gi|255551703|ref|XP_002516897.1| Flavonol synthase/flavanone 3-hydroxylase, putative [Ricinus communis] gi|223543985|gb|EEF45511.1| Flavonol synthase/flavanone 3-hydroxylase, putative [Ricinus communis] Back     alignment and taxonomy information
 Score =  627 bits (1616), Expect = e-177,   Method: Compositional matrix adjust.
 Identities = 296/363 (81%), Positives = 334/363 (92%), Gaps = 3/363 (0%)

Query: 1   MAPVPTFPVKVGQIDDVQELRKVEPSTIPERFVRDLTERPSSLATALSPPAGIPIINLSK 60
           MAPVP+FP+KVGQIDDVQELRK +P+TIP RFVRD+TERP  L TA S P   PII+ S+
Sbjct: 1   MAPVPSFPIKVGQIDDVQELRKAKPTTIPARFVRDMTERPI-LNTAPSSPDDFPIIDFSR 59

Query: 61  LMKGNHDEF-HNEILNLATACEEWGFFQVIDHGIELNLLENIEKVAKDFFMLPLEEKKKY 119
           L+K N DE+  +EIL LA ACE+WGFFQVI+HGI+L+LLE IE+VA DFFMLPLEEK+KY
Sbjct: 60  LVKDNRDEYCGSEILQLARACEQWGFFQVINHGIDLSLLEKIEEVASDFFMLPLEEKQKY 119

Query: 120 PMLPGTVQGYGQAFVFSENQKLDWCNMFALGVEPHFIRNPKLWPAKPAEFSETLETYSRD 179
           PM PGTVQGYGQAFVFSE+QKLDWCNMFALG+EPHFIRNPKLWP KP +FSET+E YSR+
Sbjct: 120 PMAPGTVQGYGQAFVFSEDQKLDWCNMFALGIEPHFIRNPKLWPLKPPKFSETVEEYSRE 179

Query: 180 VRKLCQCLLKYVAISLGLKAETFEEMFGVAVQAVRMNYYPPCPRPDLVLGLSPHSDGSAL 239
           VRKLCQ LLKY+A++LGLKA+ FEEMFGVAVQA+RMNYYPPC RPDLVLGLSPHSDGSAL
Sbjct: 180 VRKLCQNLLKYIAMTLGLKADIFEEMFGVAVQAIRMNYYPPCSRPDLVLGLSPHSDGSAL 239

Query: 240 TVLQQGKG-SSVGLQILKNNTWVPVQPIPNALVINVGDTIEVLTNGRYKSVEHRAVTHKE 298
           TVLQQGKG SSVGLQILK+N WVPVQP+PNALVIN+GDT+EVLTNG+YKSVEHRAVTHKE
Sbjct: 240 TVLQQGKGSSSVGLQILKDNKWVPVQPVPNALVINIGDTLEVLTNGKYKSVEHRAVTHKE 299

Query: 299 KDRLSIVTFYAPSYEVELGPMPELVNENNPCKYRRYNHGEYSKHYVTNKLQGKKTMEFAK 358
           KDRLSIVTFYAPSY++ELGPMPELV+ENNPCKYRRY HGEY+KHYVTNKLQGKKT+EFAK
Sbjct: 300 KDRLSIVTFYAPSYDIELGPMPELVDENNPCKYRRYTHGEYNKHYVTNKLQGKKTLEFAK 359

Query: 359 IQT 361
           I++
Sbjct: 360 IKS 362

Source: Ricinus communis

Species: Ricinus communis

Genus: Ricinus

Family: Euphorbiaceae

Order: Malpighiales

Class:

Phylum: Streptophyta

Superkingdom: Eukaryota
>gi|224110576|ref|XP_002315563.1| predicted protein [Populus trichocarpa] gi|222864603|gb|EEF01734.1| predicted protein [Populus trichocarpa] Back     alignment and taxonomy information
>gi|225432270|ref|XP_002272119.1| PREDICTED: protein SRG1 [Vitis vinifera] gi|297736858|emb|CBI26059.3| unnamed protein product [Vitis vinifera] Back     alignment and taxonomy information
>gi|356529759|ref|XP_003533455.1| PREDICTED: protein SRG1-like [Glycine max] Back     alignment and taxonomy information
>gi|356556124|ref|XP_003546377.1| PREDICTED: protein SRG1-like [Glycine max] Back     alignment and taxonomy information
>gi|449433391|ref|XP_004134481.1| PREDICTED: protein SRG1-like [Cucumis sativus] Back     alignment and taxonomy information
>gi|449495448|ref|XP_004159844.1| PREDICTED: LOW QUALITY PROTEIN: protein SRG1-like [Cucumis sativus] Back     alignment and taxonomy information
>gi|297830846|ref|XP_002883305.1| oxidoreductase [Arabidopsis lyrata subsp. lyrata] gi|297329145|gb|EFH59564.1| oxidoreductase [Arabidopsis lyrata subsp. lyrata] Back     alignment and taxonomy information
>gi|18402992|ref|NP_566685.1| oxidoreductase, 2OG-Fe(II) oxygenase family protein [Arabidopsis thaliana] gi|9294689|dbj|BAB03055.1| unnamed protein product [Arabidopsis thaliana] gi|21537021|gb|AAM61362.1| putative ethylene-forming enzyme [Arabidopsis thaliana] gi|29029088|gb|AAO64923.1| At3g21420 [Arabidopsis thaliana] gi|110743077|dbj|BAE99431.1| hypothetical protein [Arabidopsis thaliana] gi|332642986|gb|AEE76507.1| oxidoreductase, 2OG-Fe(II) oxygenase family protein [Arabidopsis thaliana] Back     alignment and taxonomy information
>gi|356563932|ref|XP_003550211.1| PREDICTED: protein SRG1-like [Glycine max] Back     alignment and taxonomy information

Prediction of Gene Ontology (GO) Terms

Close Homologs with Gene Ontology terms Detected by BLAST ?

Original result of BLAST against Gene Ontology (AMIGO)

ID ? Alignment graph ? Length ? Definition ? Q cover ? H cover ? Identity ? E-value ?
Query365
TAIR|locus:2089428364 LBO1 "LATERAL BRANCHING OXIDOR 0.980 0.983 0.719 8.9e-141
TAIR|locus:2020407358 SRG1 "senescence-related gene 0.936 0.955 0.415 1.4e-73
TAIR|locus:2122679353 AT4G25310 [Arabidopsis thalian 0.926 0.957 0.421 1.4e-71
TAIR|locus:2122669356 AT4G25300 [Arabidopsis thalian 0.936 0.960 0.408 4.8e-71
TAIR|locus:2020422361 AT1G17010 [Arabidopsis thalian 0.942 0.952 0.409 2.4e-69
TAIR|locus:2202980356 AT1G78550 [Arabidopsis thalian 0.904 0.926 0.407 3.8e-69
TAIR|locus:2042942353 AT2G38240 [Arabidopsis thalian 0.873 0.903 0.384 4.2e-63
TAIR|locus:2169697371 AT5G05600 [Arabidopsis thalian 0.915 0.900 0.354 5.5e-61
TAIR|locus:2010242348 AT1G49390 [Arabidopsis thalian 0.895 0.939 0.405 2.7e-59
TAIR|locus:2082058363 JRG21 "jasmonate-regulated gen 0.912 0.917 0.341 2.9e-55
TAIR|locus:2089428 LBO1 "LATERAL BRANCHING OXIDOREDUCTASE 1" [Arabidopsis thaliana (taxid:3702)] Back     alignment and assigned GO terms
 Score = 1377 (489.8 bits), Expect = 8.9e-141, P = 8.9e-141
 Identities = 261/363 (71%), Positives = 313/363 (86%)

Query:     1 MAPVPTFPVKVGQIDDVQELRKVEPSTIPERFVRDLTERP---SSLATALSPPAGIPIIN 57
             MAP+P   ++VG+IDDVQEL K +P+ +PERF+R+  ER    SSL T       IP+I+
Sbjct:     1 MAPLPISSIRVGKIDDVQELIKSKPNKVPERFIREEYERGVVVSSLKTHHLHHQ-IPVID 59

Query:    58 LSKLMKGNHDEFHNEILNLATACEEWGFFQVIDHGIELNLLENIEKVAKDFFMLPLEEKK 117
             LSKL K ++D+F  EIL L+ ACE+WGFFQVI+HGIE+ ++E+IE+VA +FF +PLEEKK
Sbjct:    60 LSKLSKPDNDDFFFEILKLSQACEDWGFFQVINHGIEVEVVEDIEEVASEFFDMPLEEKK 119

Query:   118 KYPMLPGTVQGYGQAFVFSENQKLDWCNMFALGVEPHFIRNPKLWPAKPAEFSETLETYS 177
             KYPM PGTVQGYGQAF+FSE+QKLDWCNMFALGV P  IRNPKLWP+KPA FSE+LE YS
Sbjct:   120 KYPMEPGTVQGYGQAFIFSEDQKLDWCNMFALGVHPPQIRNPKLWPSKPARFSESLEGYS 179

Query:   178 RDVRKLCQCLLKYVAISLGLKAETFEEMFGVAVQAVRMNYYPPCPRPDLVLGLSPHSDGS 237
             +++R+LC+ LLKY+AISLGLK E FEEMFG AVQAVRMNYYPPC  PDLVLGLSPHSDGS
Sbjct:   180 KEIRELCKRLLKYIAISLGLKEERFEEMFGEAVQAVRMNYYPPCSSPDLVLGLSPHSDGS 239

Query:   238 ALTVLQQGKGSSVGLQILKNNTWVPVQPIPNALVINVGDTIEVLTNGRYKSVEHRAVTHK 297
             ALTVLQQ K S VGLQILK+NTWVPV+P+PNALVIN+GDTIEVL+NG+YKSVEHRAVT++
Sbjct:   240 ALTVLQQSKNSCVGLQILKDNTWVPVKPLPNALVINIGDTIEVLSNGKYKSVEHRAVTNR 299

Query:   298 EKDRLSIVTFYAPSYEVELGPMPELVN-ENNPCKYRRYNHGEYSKHYVTNKLQGKKTMEF 356
             EK+RL+IVTFYAP+YEVE+ PM ELV+ E NPCKYR YNHG+YS HYV+NKLQGKK+++F
Sbjct:   300 EKERLTIVTFYAPNYEVEIEPMSELVDDETNPCKYRSYNHGDYSYHYVSNKLQGKKSLDF 359

Query:   357 AKI 359
             AKI
Sbjct:   360 AKI 362
GO:0005737 "cytoplasm" evidence=ISM
GO:0008152 "metabolic process" evidence=ISS
GO:0016491 "oxidoreductase activity" evidence=IEA;ISS
GO:0016706 "oxidoreductase activity, acting on paired donors, with incorporation or reduction of molecular oxygen, 2-oxoglutarate as one donor, and incorporation of one atom each of oxygen into both donors" evidence=IEA
GO:0055114 "oxidation-reduction process" evidence=IEA
TAIR|locus:2020407 SRG1 "senescence-related gene 1" [Arabidopsis thaliana (taxid:3702)] Back     alignment and assigned GO terms
TAIR|locus:2122679 AT4G25310 [Arabidopsis thaliana (taxid:3702)] Back     alignment and assigned GO terms
TAIR|locus:2122669 AT4G25300 [Arabidopsis thaliana (taxid:3702)] Back     alignment and assigned GO terms
TAIR|locus:2020422 AT1G17010 [Arabidopsis thaliana (taxid:3702)] Back     alignment and assigned GO terms
TAIR|locus:2202980 AT1G78550 [Arabidopsis thaliana (taxid:3702)] Back     alignment and assigned GO terms
TAIR|locus:2042942 AT2G38240 [Arabidopsis thaliana (taxid:3702)] Back     alignment and assigned GO terms
TAIR|locus:2169697 AT5G05600 [Arabidopsis thaliana (taxid:3702)] Back     alignment and assigned GO terms
TAIR|locus:2010242 AT1G49390 [Arabidopsis thaliana (taxid:3702)] Back     alignment and assigned GO terms
TAIR|locus:2082058 JRG21 "jasmonate-regulated gene 21" [Arabidopsis thaliana (taxid:3702)] Back     alignment and assigned GO terms

Prediction of Enzyme Commission (EC) Number

EC Number Prediction by Annotation Transfer from SWISS-PROT Entries ?

Original result of BLAST against SWISS-PROT

No confident hit for EC number transfering in SWISSPROT detected by BLAST

EC Number Prediction by Ezypred Server ?

Original result from Ezypred Server

Fail to connect to Ezypred Server

EC Number Prediction by EFICAz Software ?

Prediction LevelEC numberConfidence of Prediction
3rd Layer1.14.110.766
4th Layer1.14.11.11LOW CONFIDENCE prediction!
4th Layer1.14.11.4LOW CONFIDENCE prediction!

Prediction of Functionally Associated Proteins

Functionally Associated Proteins Detected by STRING ?

Original result from the STRING server

Fail to connect to STRING server

Conserved Domains and Related Protein Families

Conserved Domains Detected by RPS-BLAST ?

Original result of RPS-BLAST against CDD database part I

ID ?Alignment Graph ?Length ? Definition ? E-value ?
Query365
PLN02758361 PLN02758, PLN02758, oxidoreductase, 2OG-Fe(II) oxy 0.0
PLN02216357 PLN02216, PLN02216, protein SRG1 1e-109
PLN02393362 PLN02393, PLN02393, leucoanthocyanidin dioxygenase 1e-101
PLN03178360 PLN03178, PLN03178, leucoanthocyanidin dioxygenase 1e-83
PLN00417348 PLN00417, PLN00417, oxidoreductase, 2OG-Fe(II) oxy 1e-77
PLN02639337 PLN02639, PLN02639, oxidoreductase, 2OG-Fe(II) oxy 7e-77
PLN02704335 PLN02704, PLN02704, flavonol synthase 1e-74
PLN02750345 PLN02750, PLN02750, oxidoreductase, 2OG-Fe(II) oxy 2e-74
PLN02254358 PLN02254, PLN02254, gibberellin 3-beta-dioxygenase 8e-73
PLN02912348 PLN02912, PLN02912, oxidoreductase, 2OG-Fe(II) oxy 1e-67
PLN02947374 PLN02947, PLN02947, oxidoreductase 5e-66
PLN02276361 PLN02276, PLN02276, gibberellin 20-oxidase 6e-65
PLN03001262 PLN03001, PLN03001, oxidoreductase, 2OG-Fe(II) oxy 1e-58
PLN02515358 PLN02515, PLN02515, naringenin,2-oxoglutarate 3-di 2e-56
PLN02904357 PLN02904, PLN02904, oxidoreductase 5e-56
PLN02299321 PLN02299, PLN02299, 1-aminocyclopropane-1-carboxyl 1e-55
COG3491322 COG3491, PcbC, Isopenicillin N synthase and relate 7e-55
PLN02997325 PLN02997, PLN02997, flavonol synthase 3e-50
PLN02403303 PLN02403, PLN02403, aminocyclopropanecarboxylate o 3e-43
PLN02156335 PLN02156, PLN02156, gibberellin 2-beta-dioxygenase 3e-39
PTZ00273320 PTZ00273, PTZ00273, oxidase reductase; Provisional 9e-38
PLN02365300 PLN02365, PLN02365, 2-oxoglutarate-dependent dioxy 5e-37
PLN02485329 PLN02485, PLN02485, oxidoreductase 1e-34
PLN02984341 PLN02984, PLN02984, oxidoreductase, 2OG-Fe(II) oxy 6e-33
pfam0317196 pfam03171, 2OG-FeII_Oxy, 2OG-Fe(II) oxygenase supe 2e-32
pfam14226113 pfam14226, DIOX_N, non-haem dioxygenase in morphin 7e-32
PLN03002332 PLN03002, PLN03002, oxidoreductase, 2OG-Fe(II) oxy 5e-25
PLN03176120 PLN03176, PLN03176, flavanone-3-hydroxylase; Provi 1e-16
>gnl|CDD|215404 PLN02758, PLN02758, oxidoreductase, 2OG-Fe(II) oxygenase family protein Back     alignment and domain information 
 Score =  707 bits (1826), Expect = 0.0
 Identities = 289/361 (80%), Positives = 327/361 (90%)

Query: 1   MAPVPTFPVKVGQIDDVQELRKVEPSTIPERFVRDLTERPSSLATALSPPAGIPIINLSK 60
           MAPVP  P+KVGQIDDVQELRK +P+T+PERF+RD+ ERP   +  L  P  IP+I+ S+
Sbjct: 1   MAPVPISPIKVGQIDDVQELRKSKPTTVPERFIRDMDERPDLASDTLHAPDDIPVIDFSR 60

Query: 61  LMKGNHDEFHNEILNLATACEEWGFFQVIDHGIELNLLENIEKVAKDFFMLPLEEKKKYP 120
           L+KG++DE  +EIL L  ACEEWGFFQVI+HGIEL LLE IEKVA++FFMLPLEEK+KYP
Sbjct: 61  LVKGDNDELFSEILKLRLACEEWGFFQVINHGIELELLEEIEKVAREFFMLPLEEKQKYP 120

Query: 121 MLPGTVQGYGQAFVFSENQKLDWCNMFALGVEPHFIRNPKLWPAKPAEFSETLETYSRDV 180
           M PGTVQGYGQAFVFSE+QKLDWCNMFALGVEPHFIRNPKLWP KPA FSETLE YSR++
Sbjct: 121 MAPGTVQGYGQAFVFSEDQKLDWCNMFALGVEPHFIRNPKLWPTKPARFSETLEVYSREI 180

Query: 181 RKLCQCLLKYVAISLGLKAETFEEMFGVAVQAVRMNYYPPCPRPDLVLGLSPHSDGSALT 240
           R+LCQ LLKY+A++LGLK + FEEMFG AVQAVRMNYYPPC RPDLVLGLSPHSDGSALT
Sbjct: 181 RELCQRLLKYIAMTLGLKEDRFEEMFGEAVQAVRMNYYPPCSRPDLVLGLSPHSDGSALT 240

Query: 241 VLQQGKGSSVGLQILKNNTWVPVQPIPNALVINVGDTIEVLTNGRYKSVEHRAVTHKEKD 300
           VLQQGKGS VGLQILK+NTWVPV P+PNALVIN+GDT+EVLTNG+YKSVEHRAVT+KEKD
Sbjct: 241 VLQQGKGSCVGLQILKDNTWVPVHPVPNALVINIGDTLEVLTNGKYKSVEHRAVTNKEKD 300

Query: 301 RLSIVTFYAPSYEVELGPMPELVNENNPCKYRRYNHGEYSKHYVTNKLQGKKTMEFAKIQ 360
           RLSIVTFYAPSYEVELGPMPELV++ NPCKYRRYNHGEYS+HYVT+KLQGKKT+EFAKI 
Sbjct: 301 RLSIVTFYAPSYEVELGPMPELVDDENPCKYRRYNHGEYSRHYVTSKLQGKKTLEFAKIL 360

Query: 361 T 361
           +
Sbjct: 361 S 361

Length = 361
>gnl|CDD|215129 PLN02216, PLN02216, protein SRG1 Back     alignment and domain information
>gnl|CDD|215220 PLN02393, PLN02393, leucoanthocyanidin dioxygenase like protein Back     alignment and domain information
>gnl|CDD|215614 PLN03178, PLN03178, leucoanthocyanidin dioxygenase; Provisional Back     alignment and domain information
>gnl|CDD|177810 PLN00417, PLN00417, oxidoreductase, 2OG-Fe(II) oxygenase family protein Back     alignment and domain information
>gnl|CDD|178245 PLN02639, PLN02639, oxidoreductase, 2OG-Fe(II) oxygenase family protein Back     alignment and domain information
>gnl|CDD|166345 PLN02704, PLN02704, flavonol synthase Back     alignment and domain information
>gnl|CDD|178351 PLN02750, PLN02750, oxidoreductase, 2OG-Fe(II) oxygenase family protein Back     alignment and domain information
>gnl|CDD|215142 PLN02254, PLN02254, gibberellin 3-beta-dioxygenase Back     alignment and domain information
>gnl|CDD|178500 PLN02912, PLN02912, oxidoreductase, 2OG-Fe(II) oxygenase family protein Back     alignment and domain information
>gnl|CDD|215510 PLN02947, PLN02947, oxidoreductase Back     alignment and domain information
>gnl|CDD|215156 PLN02276, PLN02276, gibberellin 20-oxidase Back     alignment and domain information
>gnl|CDD|166642 PLN03001, PLN03001, oxidoreductase, 2OG-Fe(II) oxygenase family protein Back     alignment and domain information
>gnl|CDD|178130 PLN02515, PLN02515, naringenin,2-oxoglutarate 3-dioxygenase Back     alignment and domain information
>gnl|CDD|178492 PLN02904, PLN02904, oxidoreductase Back     alignment and domain information
>gnl|CDD|215168 PLN02299, PLN02299, 1-aminocyclopropane-1-carboxylate oxidase Back     alignment and domain information
>gnl|CDD|226022 COG3491, PcbC, Isopenicillin N synthase and related dioxygenases [General function prediction only] Back     alignment and domain information
>gnl|CDD|178576 PLN02997, PLN02997, flavonol synthase Back     alignment and domain information
>gnl|CDD|178025 PLN02403, PLN02403, aminocyclopropanecarboxylate oxidase Back     alignment and domain information
>gnl|CDD|177816 PLN02156, PLN02156, gibberellin 2-beta-dioxygenase Back     alignment and domain information
>gnl|CDD|140299 PTZ00273, PTZ00273, oxidase reductase; Provisional Back     alignment and domain information
>gnl|CDD|177993 PLN02365, PLN02365, 2-oxoglutarate-dependent dioxygenase Back     alignment and domain information
>gnl|CDD|215267 PLN02485, PLN02485, oxidoreductase Back     alignment and domain information
>gnl|CDD|215534 PLN02984, PLN02984, oxidoreductase, 2OG-Fe(II) oxygenase family protein Back     alignment and domain information
>gnl|CDD|217403 pfam03171, 2OG-FeII_Oxy, 2OG-Fe(II) oxygenase superfamily Back     alignment and domain information
>gnl|CDD|222608 pfam14226, DIOX_N, non-haem dioxygenase in morphine synthesis N-terminal Back     alignment and domain information
>gnl|CDD|178579 PLN03002, PLN03002, oxidoreductase, 2OG-Fe(II) oxygenase family protein Back     alignment and domain information
>gnl|CDD|178720 PLN03176, PLN03176, flavanone-3-hydroxylase; Provisional Back     alignment and domain information

Conserved Domains Detected by HHsearch ?

Original result of HHsearch against CDD database

ID ?Alignment Graph ?Length ? Definition ? Probability ?
Query 365
PLN02758361 oxidoreductase, 2OG-Fe(II) oxygenase family protei 100.0
PLN02216357 protein SRG1 100.0
PLN02947374 oxidoreductase 100.0
PLN02393362 leucoanthocyanidin dioxygenase like protein 100.0
PLN02904357 oxidoreductase 100.0
PLN03178360 leucoanthocyanidin dioxygenase; Provisional 100.0
PLN02254358 gibberellin 3-beta-dioxygenase 100.0
PLN02912348 oxidoreductase, 2OG-Fe(II) oxygenase family protei 100.0
PLN02276361 gibberellin 20-oxidase 100.0
PLN02639337 oxidoreductase, 2OG-Fe(II) oxygenase family protei 100.0
PLN00417348 oxidoreductase, 2OG-Fe(II) oxygenase family protei 100.0
PLN02515358 naringenin,2-oxoglutarate 3-dioxygenase 100.0
PLN02704335 flavonol synthase 100.0
KOG0143322 consensus Iron/ascorbate family oxidoreductases [S 100.0
PLN02750345 oxidoreductase, 2OG-Fe(II) oxygenase family protei 100.0
PLN02997325 flavonol synthase 100.0
PLN02299321 1-aminocyclopropane-1-carboxylate oxidase 100.0
PTZ00273320 oxidase reductase; Provisional 100.0
PLN02485329 oxidoreductase 100.0
PLN02156335 gibberellin 2-beta-dioxygenase 100.0
PLN03002332 oxidoreductase, 2OG-Fe(II) oxygenase family protei 100.0
PLN02365300 2-oxoglutarate-dependent dioxygenase 100.0
PLN02403303 aminocyclopropanecarboxylate oxidase 100.0
PLN02984341 oxidoreductase, 2OG-Fe(II) oxygenase family protei 100.0
COG3491322 PcbC Isopenicillin N synthase and related dioxygen 100.0
PLN03001262 oxidoreductase, 2OG-Fe(II) oxygenase family protei 100.0
PF0317198 2OG-FeII_Oxy: 2OG-Fe(II) oxygenase superfamily Ent 99.92
PF14226116 DIOX_N: non-haem dioxygenase in morphine synthesis 99.91
PLN03176120 flavanone-3-hydroxylase; Provisional 99.89
PF13640100 2OG-FeII_Oxy_3: 2OG-Fe(II) oxygenase superfamily; 96.44
smart00702178 P4Hc Prolyl 4-hydroxylase alpha subunit homologues 95.16
PRK05467226 Fe(II)-dependent oxygenase superfamily protein; Pr 94.3
PF12851171 Tet_JBP: Oxygenase domain of the 2OGFeDO superfami 92.69
PF13532194 2OG-FeII_Oxy_2: 2OG-Fe(II) oxygenase superfamily; 89.38
PRK15401213 alpha-ketoglutarate-dependent dioxygenase AlkB; Pr 88.69
TIGR02466201 conserved hypothetical protein. This family consis 85.06
>PLN02758 oxidoreductase, 2OG-Fe(II) oxygenase family protein Back     alignment and domain information 
Probab=100.00  E-value=9.1e-88  Score=657.00  Aligned_cols=354  Identities=77%  Similarity=1.331  Sum_probs=316.9

Q ss_pred             CCCCCCCCC---cccChHHHHhcCCCCCCCCCCCccCCCCCCCCcccC-CCCCCCCCceEEcCCCCCCChhhHHHHHHHH
Q 017816            1 MAPVPTFPV---KVGQIDDVQELRKVEPSTIPERFVRDLTERPSSLAT-ALSPPAGIPIINLSKLMKGNHDEFHNEILNL   76 (365)
Q Consensus         1 ~~~~~~~~~---~~~~v~~l~~~~~~~~~~vp~~y~~~~~~~~~~~~~-~~~~~~~iPvIDl~~l~~~~~~~r~~~~~~l   76 (365)
                      |+.++-+.+   +++.||+|++++.   ++||++|++|++++|.. .. ......+||||||+.+.+++.+++.+++++|
T Consensus         1 ~~~~~~~~~~~~~~~~~~~l~~~~~---~~vp~~~v~~~~~~p~~-~~~~~~~~~~IPvIDl~~l~~~~~~~~~~~~~~l   76 (361)
T PLN02758          1 MAPVPISPIKVGQIDDVQELRKSKP---TTVPERFIRDMDERPDL-ASDTLHAPDDIPVIDFSRLVKGDNDELFSEILKL   76 (361)
T ss_pred             CCCCCcCccccCccccHHHHHhcCC---CCCCHHHcCCchhcccc-ccccccCCCCCCeEEchhhcCCChHHHHHHHHHH
Confidence            677665543   4556999999887   89999999999998854 21 1112357999999998776666566789999


Q ss_pred             HHHHHhcceEEEecCCCCHHHHHHHHHHhhhhcCCCHHHHhcCCCCCCCcccccccccccCccccCccccccccccCCCC
Q 017816           77 ATACEEWGFFQVIDHGIELNLLENIEKVAKDFFMLPLEEKKKYPMLPGTVQGYGQAFVFSENQKLDWCNMFALGVEPHFI  156 (365)
Q Consensus        77 ~~A~~~~GFF~l~nhGv~~~l~~~~~~~~~~FF~lP~eeK~~~~~~~~~~~Gy~~~~~~~~~~~~d~~e~~~~~~~p~~~  156 (365)
                      .+||++||||||+||||+.++++++++++++||+||.|+|+++...++..+||+.......+++.||+|.|.++..|...
T Consensus        77 ~~Ac~~~GFF~v~nHGi~~~l~~~~~~~~~~FF~LP~eeK~k~~~~~~~~~GY~~~~~~~~~~~~d~~e~~~~~~~p~~~  156 (361)
T PLN02758         77 RLACEEWGFFQVINHGIELELLEEIEKVAREFFMLPLEEKQKYPMAPGTVQGYGQAFVFSEDQKLDWCNMFALGVEPHFI  156 (361)
T ss_pred             HHHHHhCeEEEEecCCCCHHHHHHHHHHHHHHhcCCHHHHHHhcccCCCccccCcccccccccccCeeEEEEeeccCccc
Confidence            99999999999999999999999999999999999999999998765667899875544456678999999888777555


Q ss_pred             CCCCCCCCCchhHHHHHHHHHHHHHHHHHHHHHHHHHHCCCChhHHHHHhcCcccceeeeccCCCCCCCCccccccccCC
Q 017816          157 RNPKLWPAKPAEFSETLETYSRDVRKLCQCLLKYVAISLGLKAETFEEMFGVAVQAVRMNYYPPCPRPDLVLGLSPHSDG  236 (365)
Q Consensus       157 ~~~~~wP~~~~~fr~~~~~y~~~~~~la~~ll~~la~~Lgl~~~~~~~~~~~~~~~lr~~~YPp~~~~~~~~g~~~HtD~  236 (365)
                      ..++.||+.++.||+.+++|+++|.+|+.+||++|+++||+++++|.+.+....+.||+||||+|++++..+|+++|||+
T Consensus       157 ~~~~~WP~~~~~fr~~~~~y~~~~~~l~~~ll~~la~~Lgl~~~~f~~~~~~~~~~lR~~~YP~~~~~~~~~g~~~HtD~  236 (361)
T PLN02758        157 RNPKLWPTKPARFSETLEVYSREIRELCQRLLKYIAMTLGLKEDRFEEMFGEAVQAVRMNYYPPCSRPDLVLGLSPHSDG  236 (361)
T ss_pred             cccccCccccHHHHHHHHHHHHHHHHHHHHHHHHHHHHcCCChhhhHHHhcCccceeeeecCCCCCCcccccCccCccCC
Confidence            56899999999999999999999999999999999999999999999998888889999999999999999999999999


Q ss_pred             CceeEEEeCC-CCcCCeeeeeCCeEEEecCCCCeEEEEecchhhhhcCCccccccccccCCCCCCeEEEEEeecCCCCcE
Q 017816          237 SALTVLQQGK-GSSVGLQILKNNTWVPVQPIPNALVINVGDTIEVLTNGRYKSVEHRAVTHKEKDRLSIVTFYAPSYEVE  315 (365)
Q Consensus       237 ~~lTlL~q~d-~~v~GLQV~~~g~W~~V~p~pg~lvVNvGD~L~~~SnG~~kS~~HRVv~~~~~~R~Si~~F~~P~~d~~  315 (365)
                      |+||||+|++ + ++||||+++|+|++|+|+||+||||+||+||+||||+|||++|||++++.++|||++||++|+.|++
T Consensus       237 g~lTlL~qd~~~-v~GLQV~~~g~Wi~V~p~pgalVVNiGD~L~~~SNG~~kS~~HRVv~~~~~~R~Sia~F~~P~~d~~  315 (361)
T PLN02758        237 SALTVLQQGKGS-CVGLQILKDNTWVPVHPVPNALVINIGDTLEVLTNGKYKSVEHRAVTNKEKDRLSIVTFYAPSYEVE  315 (361)
T ss_pred             ceeEEEEeCCCC-CCCeeeeeCCEEEeCCCCCCeEEEEccchhhhhcCCeeecccceeecCCCCCEEEEEEEecCCCCCe
Confidence            9999999933 5 8999999999999999999999999999999999999999999999988889999999999999999


Q ss_pred             eeCCCcccCCCCCCCCCCccHHHHHHHHHHccCCCCcccccccc
Q 017816          316 LGPMPELVNENNPCKYRRYNHGEYSKHYVTNKLQGKKTMEFAKI  359 (365)
Q Consensus       316 i~Pl~~lv~~~~p~~y~~~~~~ey~~~~~~~~~~~~~~~~~~~~  359 (365)
                      |.|+++|+++++|++|++++|+||+..++++...++..++.+|+
T Consensus       316 i~pl~elv~~~~p~~Y~~~~~~ey~~~~~~~~~~~~~~~~~~~~  359 (361)
T PLN02758        316 LGPMPELVDDENPCKYRRYNHGEYSRHYVTSKLQGKKTLEFAKI  359 (361)
T ss_pred             EeCCHHHcCCCCCCcCCCccHHHHHHHHHhcccCchhhhhhhcc
Confidence            99999999999999999999999999999999888888888775

>PLN02216 protein SRG1 Back     alignment and domain information
>PLN02947 oxidoreductase Back     alignment and domain information
>PLN02393 leucoanthocyanidin dioxygenase like protein Back     alignment and domain information
>PLN02904 oxidoreductase Back     alignment and domain information
>PLN03178 leucoanthocyanidin dioxygenase; Provisional Back     alignment and domain information
>PLN02254 gibberellin 3-beta-dioxygenase Back     alignment and domain information
>PLN02912 oxidoreductase, 2OG-Fe(II) oxygenase family protein Back     alignment and domain information
>PLN02276 gibberellin 20-oxidase Back     alignment and domain information
>PLN02639 oxidoreductase, 2OG-Fe(II) oxygenase family protein Back     alignment and domain information
>PLN00417 oxidoreductase, 2OG-Fe(II) oxygenase family protein Back     alignment and domain information
>PLN02515 naringenin,2-oxoglutarate 3-dioxygenase Back     alignment and domain information
>PLN02704 flavonol synthase Back     alignment and domain information
>KOG0143 consensus Iron/ascorbate family oxidoreductases [Secondary metabolites biosynthesis, transport and catabolism; General function prediction only] Back     alignment and domain information
>PLN02750 oxidoreductase, 2OG-Fe(II) oxygenase family protein Back     alignment and domain information
>PLN02997 flavonol synthase Back     alignment and domain information
>PLN02299 1-aminocyclopropane-1-carboxylate oxidase Back     alignment and domain information
>PTZ00273 oxidase reductase; Provisional Back     alignment and domain information
>PLN02485 oxidoreductase Back     alignment and domain information
>PLN02156 gibberellin 2-beta-dioxygenase Back     alignment and domain information
>PLN03002 oxidoreductase, 2OG-Fe(II) oxygenase family protein Back     alignment and domain information
>PLN02365 2-oxoglutarate-dependent dioxygenase Back     alignment and domain information
>PLN02403 aminocyclopropanecarboxylate oxidase Back     alignment and domain information
>PLN02984 oxidoreductase, 2OG-Fe(II) oxygenase family protein Back     alignment and domain information
>COG3491 PcbC Isopenicillin N synthase and related dioxygenases [General function prediction only] Back     alignment and domain information
>PLN03001 oxidoreductase, 2OG-Fe(II) oxygenase family protein Back     alignment and domain information
>PF03171 2OG-FeII_Oxy: 2OG-Fe(II) oxygenase superfamily Entry for Lysyl hydrolases This Prosite entry is a sub-family of the Pfam entry; InterPro: IPR005123 This domain is found in members of the 2-oxoglutarate (2OG) and Fe(II)-dependent oxygenase superfamily [], as well as the C-terminal of prolyl 4-hydroxylase alpha subunit Back     alignment and domain information
>PF14226 DIOX_N: non-haem dioxygenase in morphine synthesis N-terminal; PDB: 3OOX_A 1BK0_A 1IPS_B 1QIQ_A 1OC1_A 2Y86_A 2Y60_A 1W03_A 2VE1_A 1QJF_A Back     alignment and domain information
>PLN03176 flavanone-3-hydroxylase; Provisional Back     alignment and domain information
>PF13640 2OG-FeII_Oxy_3: 2OG-Fe(II) oxygenase superfamily; PDB: 3DKQ_B 3GZE_D 3HQR_A 2Y34_A 2G1M_A 2G19_A 3OUI_A 3OUJ_A 2HBU_A 2Y33_A Back     alignment and domain information
>smart00702 P4Hc Prolyl 4-hydroxylase alpha subunit homologues Back     alignment and domain information
>PRK05467 Fe(II)-dependent oxygenase superfamily protein; Provisional Back     alignment and domain information
>PF12851 Tet_JBP: Oxygenase domain of the 2OGFeDO superfamily ; InterPro: IPR024779 TETs are 2OG- and Fe(II)-dependent oxygenases that catalyse the conversion of 5 methyl-Cytosine (5-MC) to 5-hydroxymethyl-cytosine (hmC) in cultured cells and in vitro [] Back     alignment and domain information
>PF13532 2OG-FeII_Oxy_2: 2OG-Fe(II) oxygenase superfamily; PDB: 2IUW_A 3BTZ_A 3RZL_A 3RZH_A 3S5A_A 3RZG_A 3RZJ_A 3BUC_A 3H8X_A 3H8R_A Back     alignment and domain information
>PRK15401 alpha-ketoglutarate-dependent dioxygenase AlkB; Provisional Back     alignment and domain information
>TIGR02466 conserved hypothetical protein Back     alignment and domain information

Homologous Structure Templates

Structure Templates Detected by BLAST ?

Original result of BLAST against Protein Data Bank

ID ?Alignment Graph ?Length ? Definition ? E-value ?
Query365
1gp5_A356 Anthocyanidin Synthase From Arabidopsis Thaliana Co 5e-49
2brt_A355 Anthocyanidin Synthase From Arabidopsis Thaliana Co 5e-49
1gp4_A356 Anthocyanidin Synthase From Arabidopsis Thaliana (S 9e-48
1w9y_A319 The Structure Of Acc Oxidase Length = 319 3e-40
3oox_A312 Crystal Structure Of A Putative 2og-Fe(Ii) Oxygenas 9e-18
2bjs_A325 Isopenicillin N Synthase C-Terminal Truncation Muta 5e-07
1ips_A331 Isopenicillin N Synthase From Aspergillus Nidulans 5e-07
1e5i_A306 Delta-R306 Deacetoxycephalosporin C Synthase Comple 3e-05
1e5h_A308 Delta-R307a Deacetoxycephalosporin C Synthase Compl 3e-05
1hjf_A311 Alteration Of The Co-Substrate Selectivity Of Deace 3e-05
1unb_A311 Deacetoxycephalosporin C Synthase Complexed With 2- 5e-05
1w28_A331 Conformational Flexibility Of The C-Terminus With I 6e-05
3on7_A280 Crystal Structure Of A Putative Oxygenase (So_2589) 6e-05
>pdb|1GP5|A Chain A, Anthocyanidin Synthase From Arabidopsis Thaliana Complexed With Trans-Dihydroquercetin Length = 356 Back     alignment and structure 
Iteration: 1

 Score =  191 bits (486), Expect = 5e-49,   Method: Compositional matrix adjust.
 Identities = 108/346 (31%), Positives = 188/346 (54%), Gaps = 12/346 (3%)
Query: 14  IDDVQELRKVEPSTIPERFVRDLTERPSS----LATALSPPAGIPIINLSKLMKGNHDEF 69
           ++ V+ L K    +IP+ ++R   E  S     L         +P I+L  +   +    
Sbjct: 4   VERVESLAKSGIISIPKEYIRPKEELESINDVFLEEKKEDGPQVPTIDLKNIESDDEKIR 63
Query: 70  HNEILNLATACEEWGFFQVIDHGIELNLLENIEKVAKDFFMLPLEEKKKYP--MLPGTVQ 127
            N I  L  A  +WG   +I+HGI  +L+E ++K  ++FF L +EEK+KY      G +Q
Sbjct: 64  ENCIEELKKASLDWGVMHLINHGIPADLMERVKKAGEEFFSLSVEEKEKYANDQATGKIQ 123
Query: 128 GYGQAFVFSENQKLDWCNMFALGVEPHFIRNPKLWPAKPAEFSETLETYSRDVRKLCQCL 187
           GYG     + + +L+W + F     P   R+  +WP  P+++ E    Y++ +R L   +
Sbjct: 124 GYGSKLANNASGQLEWEDYFFHLAYPEEKRDLSIWPKTPSDYIEATSEYAKCLRLLATKV 183
Query: 188 LKYVAISLGLKAETFEEMFGVAVQ---AVRMNYYPPCPRPDLVLGLSPHSDGSALTVLQQ 244
            K +++ LGL+ +  E+  G   +    +++NYYP CP+P+L LG+  H+D SALT +  
Sbjct: 184 FKALSVGLGLEPDRLEKEVGGLEELLLQMKINYYPKCPQPELALGVEAHTDVSALTFILH 243
Query: 245 GKGSSVGLQILKNNTWVPVQPIPNALVINVGDTIEVLTNGRYKSVEHRAVTHKEKDRLSI 304
                 GLQ+     WV  + +P+++V+++GDT+E+L+NG+YKS+ HR + +KEK R+S 
Sbjct: 244 N--MVPGLQLFYEGKWVTAKCVPDSIVMHIGDTLEILSNGKYKSILHRGLVNKEKVRISW 301
Query: 305 VTFYAPSYE-VELGPMPELVNENNPCKYRRYNHGEYSKHYVTNKLQ 349
             F  P  + + L P+PE+V+  +P K+      ++ +H +  K Q
Sbjct: 302 AVFCEPPKDKIVLKPLPEMVSVESPAKFPPRTFAQHIEHKLFGKEQ 347
>pdb|2BRT|A Chain A, Anthocyanidin Synthase From Arabidopsis Thaliana Complexed With Naringenin Length = 355 Back     alignment and structure
>pdb|1GP4|A Chain A, Anthocyanidin Synthase From Arabidopsis Thaliana (Selenomethionine Substituted) Length = 356 Back     alignment and structure
>pdb|1W9Y|A Chain A, The Structure Of Acc Oxidase Length = 319 Back     alignment and structure
>pdb|3OOX|A Chain A, Crystal Structure Of A Putative 2og-Fe(Ii) Oxygenase Family Protein (Cc_0200) From Caulobacter Crescentus At 1.44 A Resolution Length = 312 Back     alignment and structure
>pdb|2BJS|A Chain A, Isopenicillin N Synthase C-Terminal Truncation Mutant Length = 325 Back     alignment and structure
>pdb|1IPS|A Chain A, Isopenicillin N Synthase From Aspergillus Nidulans (Manganese Complex) Length = 331 Back     alignment and structure
>pdb|1E5I|A Chain A, Delta-R306 Deacetoxycephalosporin C Synthase Complexed With Iron And 2-Oxoglutarate Length = 306 Back     alignment and structure
>pdb|1E5H|A Chain A, Delta-R307a Deacetoxycephalosporin C Synthase Complexed With Succinate And Carbon Dioxide Length = 308 Back     alignment and structure
>pdb|1HJF|A Chain A, Alteration Of The Co-Substrate Selectivity Of Deacetoxycephalosporin C Synthase: The Role Of Arginine-258 Length = 311 Back     alignment and structure
>pdb|1UNB|A Chain A, Deacetoxycephalosporin C Synthase Complexed With 2-Oxoglutarate And Ampicillin Length = 311 Back     alignment and structure
>pdb|1W28|A Chain A, Conformational Flexibility Of The C-Terminus With Implications For Substrate Binding And Catalysis In A New Crystal Form Of Deacetoxycephalosporin C Synthase Length = 331 Back     alignment and structure
>pdb|3ON7|A Chain A, Crystal Structure Of A Putative Oxygenase (So_2589) From Shewanella Oneidensis At 2.20 A Resolution Length = 280 Back     alignment and structure

Structure Templates Detected by RPS-BLAST ?

Original result of RPS-BLAST against PDB70 database

ID ?Alignment Graph ?Length ? Definition ? E-value ?
Query365
1gp6_A356 Leucoanthocyanidin dioxygenase; 2-oxoglutarate dep 1e-161
1w9y_A319 1-aminocyclopropane-1-carboxylate oxidase 1; oxyge 1e-147
1dcs_A311 Deacetoxycephalosporin C synthase; ferrous oxygena 1e-105
1odm_A331 Isopenicillin N synthase; antibiotic biosynthesis, 4e-90
3oox_A312 Putative 2OG-Fe(II) oxygenase family protein; stru 2e-82
3on7_A280 Oxidoreductase, iron/ascorbate family; structural 1e-76
1vt4_I 1221 APAF-1 related killer DARK; drosophila apoptosome, 1e-07
1vt4_I 1221 APAF-1 related killer DARK; drosophila apoptosome, 7e-04
>1gp6_A Leucoanthocyanidin dioxygenase; 2-oxoglutarate dependent dioxygenase, flavonoid biosynthesis; HET: MES QUE DH2; 1.75A {Arabidopsis thaliana} SCOP: b.82.2.1 PDB: 1gp5_A* 1gp4_A* 2brt_A* Length = 356 Back     alignment and structure
 Score =  455 bits (1172), Expect = e-161
 Identities = 111/357 (31%), Positives = 192/357 (53%), Gaps = 16/357 (4%)

Query: 14  IDDVQELRKVEPSTIPERFVRDLTERPSSLATALSPPAG----IPIINLSKLMKGNHDEF 69
           ++ V+ L K    +IP+ ++R   E  S     L         +P I+L  +   +    
Sbjct: 4   VERVESLAKSGIISIPKEYIRPKEELESINDVFLEEKKEDGPQVPTIDLKNIESDDEKIR 63

Query: 70  HNEILNLATACEEWGFFQVIDHGIELNLLENIEKVAKDFFMLPLEEKKKY--PMLPGTVQ 127
            N I  L  A  +WG   +I+HGI  +L+E ++K  ++FF L +EEK+KY      G +Q
Sbjct: 64  ENCIEELKKASLDWGVMHLINHGIPADLMERVKKAGEEFFSLSVEEKEKYANDQATGKIQ 123

Query: 128 GYGQAFVFSENQKLDWCNMFALGVEPHFIRNPKLWPAKPAEFSETLETYSRDVRKLCQCL 187
           GYG     + + +L+W + F     P   R+  +WP  P+++ E    Y++ +R L   +
Sbjct: 124 GYGSKLANNASGQLEWEDYFFHLAYPEEKRDLSIWPKTPSDYIEATSEYAKCLRLLATKV 183

Query: 188 LKYVAISLGLKAETFEEMFGV---AVQAVRMNYYPPCPRPDLVLGLSPHSDGSALTVLQQ 244
            K +++ LGL+ +  E+  G     +  +++NYYP CP+P+L LG+  H+D SALT +  
Sbjct: 184 FKALSVGLGLEPDRLEKEVGGLEELLLQMKINYYPKCPQPELALGVEAHTDVSALTFILH 243

Query: 245 GKGSSVGLQILKNNTWVPVQPIPNALVINVGDTIEVLTNGRYKSVEHRAVTHKEKDRLSI 304
                 GLQ+     WV  + +P+++V+++GDT+E+L+NG+YKS+ HR + +KEK R+S 
Sbjct: 244 NMVP--GLQLFYEGKWVTAKCVPDSIVMHIGDTLEILSNGKYKSILHRGLVNKEKVRISW 301

Query: 305 VTFYAPSYE-VELGPMPELVNENNPCKYRRYNHGEYSKHYVTNKLQGKKTMEFAKIQ 360
             F  P  + + L P+PE+V+  +P K+      ++ +H    KL GK+  E    +
Sbjct: 302 AVFCEPPKDKIVLKPLPEMVSVESPAKFPPRTFAQHIEH----KLFGKEQEELVSEK 354
>1w9y_A 1-aminocyclopropane-1-carboxylate oxidase 1; oxygenase, 2OG oxygenase, ACCO, ACC oxidase; 2.1A {Petunia hybrida} SCOP: b.82.2.1 PDB: 1wa6_X Length = 319 Back     alignment and structure
>1dcs_A Deacetoxycephalosporin C synthase; ferrous oxygenase, 2-oxoglutarate, oxidoreduc antibiotics, merohedral twinning; 1.30A {Streptomyces clavuligerus} SCOP: b.82.2.1 PDB: 1rxf_A 1rxg_A* 1unb_A* 1uo9_A 1uob_A* 1uof_A* 1uog_A* 2jb8_A 1w28_A 1w2a_X 1w2n_A* 1w2o_A* 1hjg_A 1hjf_A 1e5h_A 1e5i_A* Length = 311 Back     alignment and structure
>1odm_A Isopenicillin N synthase; antibiotic biosynthesis, B-lactam antibiotic, oxygenase, penicillin biosynthesis, oxidoreductase, iron; HET: ASV; 1.15A {Emericella nidulans} SCOP: b.82.2.1 PDB: 1blz_A* 1hb1_A* 1hb2_A* 1hb3_A* 1hb4_A* 1ips_A 1obn_A* 1oc1_A* 1bk0_A* 1odn_A* 1qiq_A* 1qje_A* 1qjf_A* 1uzw_A* 1w03_A* 1w04_A* 1w05_A* 1w06_A* 1w3v_A* 1w3x_A* ... Length = 331 Back     alignment and structure
>3oox_A Putative 2OG-Fe(II) oxygenase family protein; structural genomics, joint center for structural genomics; HET: MSE; 1.44A {Caulobacter crescentus CB15} Length = 312 Back     alignment and structure
>3on7_A Oxidoreductase, iron/ascorbate family; structural genomics, joint center for structural genomics, J protein structure initiative; 2.20A {Shewanella oneidensis} Length = 280 Back     alignment and structure
>1vt4_I APAF-1 related killer DARK; drosophila apoptosome, apoptosis, programmed cell death; HET: DTP; 6.90A {Drosophila melanogaster} PDB: 3iz8_A* Length = 1221 Back     alignment and structure
>1vt4_I APAF-1 related killer DARK; drosophila apoptosome, apoptosis, programmed cell death; HET: DTP; 6.90A {Drosophila melanogaster} PDB: 3iz8_A* Length = 1221 Back     alignment and structure

Structure Templates Detected by HHsearch ?

Original result of HHsearch against PDB70 database

ID ?Alignment Graph ?Length ? Definition ? Probability ?
Query365
1gp6_A356 Leucoanthocyanidin dioxygenase; 2-oxoglutarate dep 100.0
1w9y_A319 1-aminocyclopropane-1-carboxylate oxidase 1; oxyge 100.0
3oox_A312 Putative 2OG-Fe(II) oxygenase family protein; stru 100.0
1odm_A331 Isopenicillin N synthase; antibiotic biosynthesis, 100.0
1dcs_A311 Deacetoxycephalosporin C synthase; ferrous oxygena 100.0
3on7_A280 Oxidoreductase, iron/ascorbate family; structural 100.0
3dkq_A243 PKHD-type hydroxylase SBAL_3634; putative oxygenas 94.48
2rg4_A216 Uncharacterized protein; rhodobacterales, oceanico 93.23
2hbt_A247 EGL nine homolog 1; prolyl hydroxylase, hypoxia in 90.61
2iuw_A238 Alkylated repair protein ALKB homolog 3; oxidoredu 81.31
3itq_A216 Prolyl 4-hydroxylase, alpha subunit domain protei; 80.44
>1gp6_A Leucoanthocyanidin dioxygenase; 2-oxoglutarate dependent dioxygenase, flavonoid biosynthesis; HET: MES QUE DH2; 1.75A {Arabidopsis thaliana} SCOP: b.82.2.1 PDB: 1gp5_A* 1gp4_A* 2brt_A* Back     alignment and structure
Probab=100.00  E-value=3.4e-86  Score=645.35  Aligned_cols=337  Identities=31%  Similarity=0.611  Sum_probs=304.5

Q ss_pred             cccChHHHHhcCCCCCCCCCCCccCCCCCCCCcccCC--CC---CCCCCceEEcCCCCCCChhhHHHHHHHHHHHHHhcc
Q 017816           10 KVGQIDDVQELRKVEPSTIPERFVRDLTERPSSLATA--LS---PPAGIPIINLSKLMKGNHDEFHNEILNLATACEEWG   84 (365)
Q Consensus        10 ~~~~v~~l~~~~~~~~~~vp~~y~~~~~~~~~~~~~~--~~---~~~~iPvIDl~~l~~~~~~~r~~~~~~l~~A~~~~G   84 (365)
                      ++++||+|+++++   ++||++|++|++++|.. ...  ..   ...+||||||+.|.++++++|.+++++|.+||++||
T Consensus         3 ~~~~v~~l~~~~~---~~vP~~~~~p~~~~~~~-~~~~~~~~~~~~~~iPvIDls~l~~~~~~~~~~~~~~l~~A~~~~G   78 (356)
T 1gp6_A            3 AVERVESLAKSGI---ISIPKEYIRPKEELESI-NDVFLEEKKEDGPQVPTIDLKNIESDDEKIRENCIEELKKASLDWG   78 (356)
T ss_dssp             CCCCHHHHHHTTC---SSCCGGGSCCHHHHTTC-CCHHHHHHCCCSCCCCEEECTTTTCSCHHHHHHHHHHHHHHHHHTS
T ss_pred             CcccHHHHHhcCC---CCCCHHhcCCchhcccc-cccccccccccCCCCCEEEchhccCCChHHHHHHHHHHHHHHHhCC
Confidence            4677999999987   89999999998887753 210  00   013699999999977676667778999999999999


Q ss_pred             eEEEecCCCCHHHHHHHHHHhhhhcCCCHHHHhcCCCCC--CCcccccccccccCccccCccccccccccCCCCCCCCCC
Q 017816           85 FFQVIDHGIELNLLENIEKVAKDFFMLPLEEKKKYPMLP--GTVQGYGQAFVFSENQKLDWCNMFALGVEPHFIRNPKLW  162 (365)
Q Consensus        85 FF~l~nhGv~~~l~~~~~~~~~~FF~lP~eeK~~~~~~~--~~~~Gy~~~~~~~~~~~~d~~e~~~~~~~p~~~~~~~~w  162 (365)
                      ||||+||||+.++++++++.+++||+||.|+|+++....  ..++||+........++.||+|.|++...|.....+|.|
T Consensus        79 FF~v~nHGi~~~l~~~~~~~~~~FF~lP~eeK~~~~~~~~~~~~~Gy~~~~~~~~~~~~d~kE~~~~~~~p~~~~~~~~w  158 (356)
T 1gp6_A           79 VMHLINHGIPADLMERVKKAGEEFFSLSVEEKEKYANDQATGKIQGYGSKLANNASGQLEWEDYFFHLAYPEEKRDLSIW  158 (356)
T ss_dssp             EEEEESCSCCHHHHHHHHHHHHHHHTSCHHHHGGGBCBGGGTBCSEEECCCCCSTTCCCCSCEEEEEEEESGGGCCGGGS
T ss_pred             EEEEeCCCCCHHHHHHHHHHHHHHHCCCHHHHHhhcccccccCccccCcCcccCCCCCCChhheeeeecCCccccccccC
Confidence            999999999999999999999999999999999998754  368999876655556788999999998766544567899


Q ss_pred             CCCchhHHHHHHHHHHHHHHHHHHHHHHHHHHCCCChhHHHHHhc---CcccceeeeccCCCCCCCCccccccccCCCce
Q 017816          163 PAKPAEFSETLETYSRDVRKLCQCLLKYVAISLGLKAETFEEMFG---VAVQAVRMNYYPPCPRPDLVLGLSPHSDGSAL  239 (365)
Q Consensus       163 P~~~~~fr~~~~~y~~~~~~la~~ll~~la~~Lgl~~~~~~~~~~---~~~~~lr~~~YPp~~~~~~~~g~~~HtD~~~l  239 (365)
                      |+.++.||+.+++|+++|.+|+.+||++|+++||+++++|.+.+.   ...+.||+||||||++++..+|+++|||+|+|
T Consensus       159 P~~~~~fr~~~~~y~~~~~~l~~~ll~~la~~Lgl~~~~f~~~~~~~~~~~~~lrl~~YPp~~~~~~~~g~~~HtD~g~l  238 (356)
T 1gp6_A          159 PKTPSDYIEATSEYAKCLRLLATKVFKALSVGLGLEPDRLEKEVGGLEELLLQMKINYYPKCPQPELALGVEAHTDVSAL  238 (356)
T ss_dssp             CCSSTTHHHHHHHHHHHHHHHHHHHHHHHHHHTTSCTTHHHHHTTHHHHCEEEEEEEEECCCSSTTTCCSEEEECCCSSE
T ss_pred             CCcchhhhHHHHHHHHHHHHHHHHHHHHHHHHcCCCHHHHHHHhcccCCccceeeeeecCCCCCcccccCcCCccCCCeE
Confidence            999999999999999999999999999999999999999999987   46788999999999999999999999999999


Q ss_pred             eEEEeCCCCcCCeeeeeCCeEEEecCCCCeEEEEecchhhhhcCCccccccccccCCCCCCeEEEEEeecCCCCc-EeeC
Q 017816          240 TVLQQGKGSSVGLQILKNNTWVPVQPIPNALVINVGDTIEVLTNGRYKSVEHRAVTHKEKDRLSIVTFYAPSYEV-ELGP  318 (365)
Q Consensus       240 TlL~q~d~~v~GLQV~~~g~W~~V~p~pg~lvVNvGD~L~~~SnG~~kS~~HRVv~~~~~~R~Si~~F~~P~~d~-~i~P  318 (365)
                      |||+| |+ ++||||+++|+|++|+|+||+|||||||+||+||||+|||++|||+++++++|||++||++|+.|+ +|.|
T Consensus       239 TlL~q-d~-v~GLQV~~~g~Wi~V~p~pgalvVNiGD~l~~~TnG~~kS~~HRVv~~~~~~R~Sia~F~~P~~d~~~i~p  316 (356)
T 1gp6_A          239 TFILH-NM-VPGLQLFYEGKWVTAKCVPDSIVMHIGDTLEILSNGKYKSILHRGLVNKEKVRISWAVFCEPPKDKIVLKP  316 (356)
T ss_dssp             EEEEE-CS-CCCEEEEETTEEEECCCCTTCEEEEECHHHHHHTTTSSCCCCEEECCCSSCCEEEEEEEEECCTTTCEECC
T ss_pred             EEEEE-cC-CCCeEEecCCcEEECcCCCCeEEEEeccHHHHhcCCEeeccCceecCCCCCCEEEEEEeecCCCCCcEEeC
Confidence            99999 87 999999999999999999999999999999999999999999999999889999999999999999 9999


Q ss_pred             CCcccCCCCCCCCCCccHHHHHHHHHHccCCCCc
Q 017816          319 MPELVNENNPCKYRRYNHGEYSKHYVTNKLQGKK  352 (365)
Q Consensus       319 l~~lv~~~~p~~y~~~~~~ey~~~~~~~~~~~~~  352 (365)
                      +++|+++++|++|+++||+||+..+++++++|+.
T Consensus       317 l~~~~~~~~p~~y~~~t~~eyl~~~~~~~~d~~~  350 (356)
T 1gp6_A          317 LPEMVSVESPAKFPPRTFAQHIEHKLFGKEQEEL  350 (356)
T ss_dssp             CGGGCCSSSCCSSCCEEHHHHHHHHHHHHHHHHC
T ss_pred             ChhhcCCCCCccCCCccHHHHHHHHHHhccCcch
Confidence            9999999999999999999999999988876653
>1w9y_A 1-aminocyclopropane-1-carboxylate oxidase 1; oxygenase, 2OG oxygenase, ACCO, ACC oxidase; 2.1A {Petunia hybrida} SCOP: b.82.2.1 PDB: 1wa6_X Back     alignment and structure
>3oox_A Putative 2OG-Fe(II) oxygenase family protein; structural genomics, joint center for structural genomics; HET: MSE; 1.44A {Caulobacter crescentus CB15} Back     alignment and structure
>1odm_A Isopenicillin N synthase; antibiotic biosynthesis, B-lactam antibiotic, oxygenase, penicillin biosynthesis, oxidoreductase, iron; HET: ASV; 1.15A {Emericella nidulans} SCOP: b.82.2.1 PDB: 1blz_A* 1hb1_A* 1hb2_A* 1hb3_A* 1hb4_A* 1ips_A 1obn_A* 1oc1_A* 1bk0_A* 1odn_A* 1qiq_A* 1qje_A* 1qjf_A* 1uzw_A* 1w03_A* 1w04_A* 1w05_A* 1w06_A* 1w3v_A* 1w3x_A* ... Back     alignment and structure
>1dcs_A Deacetoxycephalosporin C synthase; ferrous oxygenase, 2-oxoglutarate, oxidoreduc antibiotics, merohedral twinning; 1.30A {Streptomyces clavuligerus} SCOP: b.82.2.1 PDB: 1rxf_A 1rxg_A* 1unb_A* 1uo9_A 1uob_A* 1uof_A* 1uog_A* 2jb8_A 1w28_A 1w2a_X 1w2n_A* 1w2o_A* 1hjg_A 1hjf_A 1e5h_A 1e5i_A* Back     alignment and structure
>3on7_A Oxidoreductase, iron/ascorbate family; structural genomics, joint center for structural genomics, J protein structure initiative; 2.20A {Shewanella oneidensis} Back     alignment and structure
>3dkq_A PKHD-type hydroxylase SBAL_3634; putative oxygenase, structural genomics, JOI for structural genomics, JCSG; 2.26A {Shewanella baltica OS155} Back     alignment and structure
>2rg4_A Uncharacterized protein; rhodobacterales, oceanicola granulosus HTCC2516, Q2CBJ1_9RHO structural genomics, PSI-2; 1.90A {Oceanicola granulosus} PDB: 3bvc_A Back     alignment and structure
>2hbt_A EGL nine homolog 1; prolyl hydroxylase, hypoxia inducible factor, HIF, 2- oxoglutarate, oxygenase, oxidoreductase; HET: UN9; 1.60A {Homo sapiens} PDB: 2hbu_A* 2g1m_A* 3hqu_A* 3hqr_A* 2y33_A* 2y34_A* 2g19_A* 3ouj_A* 3ouh_A* 3oui_A* Back     alignment and structure
>2iuw_A Alkylated repair protein ALKB homolog 3; oxidoreductase, DNA/RNA repair, demethylase, beta jellyroll; HET: AKG; 1.50A {Homo sapiens} SCOP: b.82.2.10 Back     alignment and structure
>3itq_A Prolyl 4-hydroxylase, alpha subunit domain protei; double-stranded beta helix, alpha-keto dependent non-heme iron oxygenase; 1.40A {Bacillus anthracis str} Back     alignment and structure

Homologous Structure Domains

Structure Domains Detected by RPS-BLAST ?

Original result of RPS-BLAST against SCOP70(version1.75) database

ID ?Alignment Graph ?Length ? Definition ? E-value ?
Query 365
d1gp6a_349 b.82.2.1 (A:) Anthocyanidin synthase {Mouse-ear cr 3e-79
d1w9ya1307 b.82.2.1 (A:2-308) 1-aminocyclopropane-1-carboxyla 3e-71
d1dcsa_311 b.82.2.1 (A:) Deacetoxycephalosporin C synthase {S 2e-62
d1odma_329 b.82.2.1 (A:) Isopenicillin N synthase {Emericella 3e-49
>d1gp6a_ b.82.2.1 (A:) Anthocyanidin synthase {Mouse-ear cress (Arabidopsis thaliana) [TaxId: 3702]} Length = 349 Back     information, alignment and structure

class: All beta proteins
fold: Double-stranded beta-helix
superfamily: Clavaminate synthase-like
family: Penicillin synthase-like
domain: Anthocyanidin synthase
species: Mouse-ear cress (Arabidopsis thaliana) [TaxId: 3702]

 Score =  244 bits (624), Expect = 3e-79
 Identities = 107/346 (30%), Positives = 187/346 (54%), Gaps = 12/346 (3%)

Query: 14  IDDVQELRKVEPSTIPERFVRDLTERPSSLATALSPPAG----IPIINLSKLMKGNHDEF 69
           ++ V+ L K    +IP+ ++R   E  S     L         +P I+L  +   +    
Sbjct: 3   VERVESLAKSGIISIPKEYIRPKEELESINDVFLEEKKEDGPQVPTIDLKNIESDDEKIR 62

Query: 70  HNEILNLATACEEWGFFQVIDHGIELNLLENIEKVAKDFFMLPLEEKKKYPMLP--GTVQ 127
            N I  L  A  +WG   +I+HGI  +L+E ++K  ++FF L +EEK+KY      G +Q
Sbjct: 63  ENCIEELKKASLDWGVMHLINHGIPADLMERVKKAGEEFFSLSVEEKEKYANDQATGKIQ 122

Query: 128 GYGQAFVFSENQKLDWCNMFALGVEPHFIRNPKLWPAKPAEFSETLETYSRDVRKLCQCL 187
           GYG     + + +L+W + F     P   R+  +WP  P+++ E    Y++ +R L   +
Sbjct: 123 GYGSKLANNASGQLEWEDYFFHLAYPEEKRDLSIWPKTPSDYIEATSEYAKCLRLLATKV 182

Query: 188 LKYVAISLGLKAETFEEMFG---VAVQAVRMNYYPPCPRPDLVLGLSPHSDGSALTVLQQ 244
            K +++ LGL+ +  E+  G     +  +++NYYP CP+P+L LG+  H+D SALT +  
Sbjct: 183 FKALSVGLGLEPDRLEKEVGGLEELLLQMKINYYPKCPQPELALGVEAHTDVSALTFILH 242

Query: 245 GKGSSVGLQILKNNTWVPVQPIPNALVINVGDTIEVLTNGRYKSVEHRAVTHKEKDRLSI 304
                  LQ+     WV  + +P+++V+++GDT+E+L+NG+YKS+ HR + +KEK R+S 
Sbjct: 243 NMVPG--LQLFYEGKWVTAKCVPDSIVMHIGDTLEILSNGKYKSILHRGLVNKEKVRISW 300

Query: 305 VTFYAPSYE-VELGPMPELVNENNPCKYRRYNHGEYSKHYVTNKLQ 349
             F  P  + + L P+PE+V+  +P K+      ++ +H +  K Q
Sbjct: 301 AVFCEPPKDKIVLKPLPEMVSVESPAKFPPRTFAQHIEHKLFGKEQ 346
>d1w9ya1 b.82.2.1 (A:2-308) 1-aminocyclopropane-1-carboxylate oxidase 1 {Petunia hybrida [TaxId: 4102]} Length = 307 Back     information, alignment and structure
>d1dcsa_ b.82.2.1 (A:) Deacetoxycephalosporin C synthase {Streptomyces clavuligerus [TaxId: 1901]} Length = 311 Back     information, alignment and structure
>d1odma_ b.82.2.1 (A:) Isopenicillin N synthase {Emericella nidulans [TaxId: 162425]} Length = 329 Back     information, alignment and structure

Homologous Domains Detected by HHsearch ?

Original result of HHsearch against SCOP70(version1.75) database

ID ?Alignment Graph ?Length ? Definition ? Probability ?
Query365
d1gp6a_349 Anthocyanidin synthase {Mouse-ear cress (Arabidops 100.0
d1w9ya1307 1-aminocyclopropane-1-carboxylate oxidase 1 {Petun 100.0
d1odma_329 Isopenicillin N synthase {Emericella nidulans [Tax 100.0
d1dcsa_311 Deacetoxycephalosporin C synthase {Streptomyces cl 100.0
d2iuwa1210 AlkB homolog 3 {Human (Homo sapiens) [TaxId: 9606] 90.24
d2fdia1200 Alkylated DNA repair protein AlkB {Escherichia col 88.17
>d1gp6a_ b.82.2.1 (A:) Anthocyanidin synthase {Mouse-ear cress (Arabidopsis thaliana) [TaxId: 3702]} Back     information, alignment and structure
class: All beta proteins
fold: Double-stranded beta-helix
superfamily: Clavaminate synthase-like
family: Penicillin synthase-like
domain: Anthocyanidin synthase
species: Mouse-ear cress (Arabidopsis thaliana) [TaxId: 3702]

Probab=100.00  E-value=1.5e-81  Score=608.71  Aligned_cols=332  Identities=31%  Similarity=0.612  Sum_probs=294.5

Q ss_pred             cccChHHHHhcCCCCCCCCCCCccCCCCCCCCcc----cCCCCCCCCCceEEcCCCCCCChhhHHHHHHHHHHHHHhcce
Q 017816           10 KVGQIDDVQELRKVEPSTIPERFVRDLTERPSSL----ATALSPPAGIPIINLSKLMKGNHDEFHNEILNLATACEEWGF   85 (365)
Q Consensus        10 ~~~~v~~l~~~~~~~~~~vp~~y~~~~~~~~~~~----~~~~~~~~~iPvIDl~~l~~~~~~~r~~~~~~l~~A~~~~GF   85 (365)
                      .+..||+|+++|+   ++||++||+|++++|.++    ........+||||||+.|.+++++.|.+++++|.+||++|||
T Consensus         2 ~~~~~~~~~~~~~---~~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~IPvIDls~l~~~d~~~r~~~~~~l~~A~~~~GF   78 (349)
T d1gp6a_           2 AVERVESLAKSGI---ISIPKEYIRPKEELESINDVFLEEKKEDGPQVPTIDLKNIESDDEKIRENCIEELKKASLDWGV   78 (349)
T ss_dssp             CCCCHHHHHHTTC---SSCCGGGSCCHHHHTTCCCHHHHHHCCCSCCCCEEECTTTTCSCHHHHHHHHHHHHHHHHHTSE
T ss_pred             CCcchHHHHhCCC---ccCCHhhcCChhhcCCCCccccccccCCCCCcCeEEChhcCCCCHHHHHHHHHHHHHHHHhCCE
Confidence            4678999999999   999999999999988651    011123457999999999888888888899999999999999


Q ss_pred             EEEecCCCCHHHHHHHHHHhhhhcCCCHHHHhcCCCCC--CCcccccccccccCccccCccccccccccCCCCCCCCCCC
Q 017816           86 FQVIDHGIELNLLENIEKVAKDFFMLPLEEKKKYPMLP--GTVQGYGQAFVFSENQKLDWCNMFALGVEPHFIRNPKLWP  163 (365)
Q Consensus        86 F~l~nhGv~~~l~~~~~~~~~~FF~lP~eeK~~~~~~~--~~~~Gy~~~~~~~~~~~~d~~e~~~~~~~p~~~~~~~~wP  163 (365)
                      |||+||||+.++++++++++++||+||.|+|+++....  +.+.||+...........+|.+.+.....+.....++.||
T Consensus        79 f~l~nHGI~~~li~~~~~~~~~FF~lP~eeK~k~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~n~wp  158 (349)
T d1gp6a_          79 MHLINHGIPADLMERVKKAGEEFFSLSVEEKEKYANDQATGKIQGYGSKLANNASGQLEWEDYFFHLAYPEEKRDLSIWP  158 (349)
T ss_dssp             EEEESCSCCHHHHHHHHHHHHHHHTSCHHHHGGGBCBGGGTBCSEEECCCCCSTTCCCCSCEEEEEEEESGGGCCGGGSC
T ss_pred             EEEEccCCCHHHHHHHHHHHHHHHcCCHHHHhhhhcccccCCccccccccccccccccchhhhhcccccccccccccccc
Confidence            99999999999999999999999999999999998643  3455666555445556677877655544454556678999


Q ss_pred             CCchhHHHHHHHHHHHHHHHHHHHHHHHHHHCCCChhHHHHHhcC---cccceeeeccCCCCCCCCccccccccCCCcee
Q 017816          164 AKPAEFSETLETYSRDVRKLCQCLLKYVAISLGLKAETFEEMFGV---AVQAVRMNYYPPCPRPDLVLGLSPHSDGSALT  240 (365)
Q Consensus       164 ~~~~~fr~~~~~y~~~~~~la~~ll~~la~~Lgl~~~~~~~~~~~---~~~~lr~~~YPp~~~~~~~~g~~~HtD~~~lT  240 (365)
                      ..++.|++.+++|+++|.+|+.+|+++++++||+++++|.+.+..   ..+.||++|||||+.++..+|+++|||+|+||
T Consensus       159 ~~~~~f~e~~~~~~~~~~~la~~ll~~la~~Lgl~~~~~~~~~~~~~~~~~~lrl~~Yp~~~~~~~~~g~~~HtD~g~lT  238 (349)
T d1gp6a_         159 KTPSDYIEATSEYAKCLRLLATKVFKALSVGLGLEPDRLEKEVGGLEELLLQMKINYYPKCPQPELALGVEAHTDVSALT  238 (349)
T ss_dssp             CSSTTHHHHHHHHHHHHHHHHHHHHHHHHHHTTSCTTHHHHHTTHHHHCEEEEEEEEECCCSSTTTCCSEEEECCCSSEE
T ss_pred             cccchHHHHHHHHHHHHHHHHHhhhHHHHHHcCCCHHHHHHHhccccccceeeeecccccccchhhccccccCCCCcceE
Confidence            999999999999999999999999999999999999999988743   45789999999999999999999999999999


Q ss_pred             EEEeCCCCcCCeeeeeCCeEEEecCCCCeEEEEecchhhhhcCCccccccccccCCCCCCeEEEEEeecCCCCcEe-eCC
Q 017816          241 VLQQGKGSSVGLQILKNNTWVPVQPIPNALVINVGDTIEVLTNGRYKSVEHRAVTHKEKDRLSIVTFYAPSYEVEL-GPM  319 (365)
Q Consensus       241 lL~q~d~~v~GLQV~~~g~W~~V~p~pg~lvVNvGD~L~~~SnG~~kS~~HRVv~~~~~~R~Si~~F~~P~~d~~i-~Pl  319 (365)
                      ||+| +. ++||||+++|+|++|+|.+|++|||+||+||+||||+|||++|||+.|++++|||++||++|+.|++| .|+
T Consensus       239 lL~q-~~-~~GLqv~~~g~W~~V~p~~~a~vVNvGD~l~~~TnG~~~St~HRVv~~~~~~R~Si~~F~~p~~d~~i~~pl  316 (349)
T d1gp6a_         239 FILH-NM-VPGLQLFYEGKWVTAKCVPDSIVMHIGDTLEILSNGKYKSILHRGLVNKEKVRISWAVFCEPPKDKIVLKPL  316 (349)
T ss_dssp             EEEE-CS-CCCEEEEETTEEEECCCCTTCEEEEECHHHHHHTTTSSCCCCEEECCCSSCCEEEEEEEEECCTTTCEECCC
T ss_pred             EEec-cC-CcceeeecCCceEEccCCCCCeeeeHHhHHHHHhCCCccCcCccccCCCCCCeEEEEEEecCCCcceeecCC
Confidence            9999 87 99999999999999999999999999999999999999999999999999999999999999999865 899


Q ss_pred             CcccCCCCCCCCCCccHHHHHHHHHHc
Q 017816          320 PELVNENNPCKYRRYNHGEYSKHYVTN  346 (365)
Q Consensus       320 ~~lv~~~~p~~y~~~~~~ey~~~~~~~  346 (365)
                      |+|+++++|++|+++||+||++.++..
T Consensus       317 ~~~v~~~~p~~y~~~t~~e~~~~rl~~  343 (349)
T d1gp6a_         317 PEMVSVESPAKFPPRTFAQHIEHKLFG  343 (349)
T ss_dssp             GGGCCSSSCCSSCCEEHHHHHHHHHHH
T ss_pred             HHHcCCCCCCCCCCccHHHHHHHHHhc
Confidence            999999999999999999999987743
>d1w9ya1 b.82.2.1 (A:2-308) 1-aminocyclopropane-1-carboxylate oxidase 1 {Petunia hybrida [TaxId: 4102]} Back     information, alignment and structure
>d1odma_ b.82.2.1 (A:) Isopenicillin N synthase {Emericella nidulans [TaxId: 162425]} Back     information, alignment and structure
>d1dcsa_ b.82.2.1 (A:) Deacetoxycephalosporin C synthase {Streptomyces clavuligerus [TaxId: 1901]} Back     information, alignment and structure
>d2iuwa1 b.82.2.10 (A:70-279) AlkB homolog 3 {Human (Homo sapiens) [TaxId: 9606]} Back     information, alignment and structure
>d2fdia1 b.82.2.10 (A:15-214) Alkylated DNA repair protein AlkB {Escherichia coli [TaxId: 562]} Back     information, alignment and structure