Citrus Sinensis ID: 017868

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Local Sequence Feature Prediction

Residue Number Marker
--------10--------20--------30--------40--------50--------60--------70--------80--------90-------100-------110-------120-------130-------140-------150-------160-------170-------180-------190-------200-------210-------220-------230-------240-------250-------260-------270-------280-------290-------300-------310-------320-------330-------340-------350-------360-----
Protein Sequence
MGKGGMSQGEKEDGEEVNMAAWLLGVNTLKIQPFELPSLGPYDVLVRMKAVGICGSDVHYLKTLRCADFVVKEPMVIGHECAGVIEKVGSEVKTLVPGDRVALEPGISCWRCDHCKGGRYNLCPEMKFFATPPVHGSLANQVVHPADLCFKLPDNVSLEEGAMCEPLSVGLHACRRANIGPETNVLIMGAGPIGLVTMLGAPRAFGAPRIVIVDVDDYRLSVAKEIGADNIVKVSTNLQDIAEEVEKIQKAMGTGIDVSFDCAGLNKTMSTALGATCAGGKVCLVGMGHHEMTVPLTPAAVREVDVVGVFRYKNTWPLCLELLRSGKIDVKPLVTHRFGFSQKEVEEAFETSARGGTAIKVMFNL
Secondary Structure (PSIPRED)
ccccccccccccccccccEEEEEEEcccEEEEEEcccccccccEEEEEEEEEEEccHHHHccccccccccccccEEccccccEEEEEEcccccccccccEEEEcccccccccccccccccccccccEEEEccccccccccEEEEccccEEEcccccccccHHHHHHHHHHHHHHHHcccccccEEEEEcccHHHHHHHHHHHHHccccEEEEEcccHHHHHHHHHccccEEEEcccccccHHHHHHHHHHHccccccEEEEccccHHHHHHHHHHHccccEEEEEccccccccccHHHHHccccEEEEEEcccccHHHHHHHHHcccccccccEEEEEccccHHHHHHHHHHHcccccEEEEEEc
Secondary Structure Prediction (SSPRO)
ccccccccccccccccccEEEEEEEccEEEEEEcccccccccEEEEEEEEEEEcHHHHHHHHHcEccccEccccEEcccEEEEEEEEEcccccccccccEEEEccEEcccccHHHHcccHHHccccEEccEccEccccEcEEEEEHHHEEEccccccHHHHHcHHHHHHHHHHHHHHccccccEEEEEcccHHHHHHHHHHHHHccccEEEEEEccHHHHHHHHHccccEEEEcccccccHHHHHHHHHHHccccccEEEEccccHHHHHHHHHHcccccEEEEcccccccccccHHHHHccccEEEEcccccccHHHHHHHHHccccccHHHEEEEEEHHHHHHHHHHHHHHcccccEEEEEEc
Coil and Loop (DISEMBL)
mgkggmsqgekedgeEVNMAAWLLGVntlkiqpfelpslgpydVLVRMKAVGicgsdvhylktlrcadfvvkepmvigHECAGVIEKVgsevktlvpgdrvalepgiscwrcdhckggrynlcpemkffatppvhgslanqvvhpadlcfklpdnvsleegamceplsvglhacrranigpetnvlimgagPIGLVtmlgaprafgaprivivdvddyRLSVAKEIGADNIVKVSTNLQDIAEEVEKIQKAMGTgidvsfdcaglnktmstalgatcaggkvclvgmghhemtvpltpaavreVDVVGVFRYKNTWPLCLELLRsgkidvkplvthrfgfsQKEVEEAFETSARGGTAIKVMFNL
Flexible Loop (DISEMBL)
mgkggmsqgekedGEEVNMAAWLLGVNTLKIQPFELPSLGPYDVLVRMKAVGICGSDVHYLKTLRCADFVVKEPMVIGHECAGVIEKVgsevktlvpgdrvalepgiscwrcdHCKGGRYNLCPEMKFFATPPVHGSLANQVVHPADLCFKLPDNVSLEEGAMCEPLSVGLHACRRANIGPETNVLIMGAGPIGLVTMLGAPRAFGAPRIVIVDVDDYRLSVAkeigadnivkvSTNLQDIAEEVEKIQKAMGTGIDVSFDCAGLNKTMSTALGATCAGGKVCLVGMGHHEMTVPLTPAAVREVDVVGVFRYKNTWPLCLELLRSGKIDVKPLVTHRFGFSQKEVEEAfetsarggtaiKVMFNL
Low Complexity Region (SEG)
MGKGGMSQGEKEDGEEVNMAAWLLGVNTLKIQPFELPSLGPYDVLVRMKAVGICGSDVHYLKTLRCADFVVKEPMVIGHECAGVIEKVGSEVKTLVPGDRVALEPGISCWRCDHCKGGRYNLCPEMKFFATPPVHGSLANQVVHPADLCFKLPDNVSLEEGAMCEPLSVGLHACRRANIGPETNVLIMGAGPIGLVTMLGAPRAFGAPRIVIVDVDDYRLSVAKEIGADNIVKVSTNLQDIAEEVEKIQKAMGTGIDVSFDCAGLNKTMSTALGATCAGGKVCLVGMGHHEMTVPLTPAAVREVDVVGVFRYKNTWPLCLELLRSGKIDVKPLVTHRFGFSQKEVEEAFETSARGGTAIKVMFNL
Disordered region (IsUnstruct)
*****************NMAAWLLGVNTLKIQPFELPSLGPYDVLVRMKAVGICGSDVHYLKTLRCADFVVKEPMVIGHECAGVIEKVGSEVKTLVPGDRVALEPGISCWRCDHCKGGRYNLCPEMKFFATPPVHGSLANQVVHPADLCFKLPDNVSLEEGAMCEPLSVGLHACRRANIGPETNVLIMGAGPIGLVTMLGAPRAFGAPRIVIVDVDDYRLSVAKEIGADNIVKVSTNLQDIAEEVEKIQKAMGTGIDVSFDCAGLNKTMSTALGATCAGGKVCLVGMGHHEMTVPLTPAAVREVDVVGVFRYKNTWPLCLELLRSGKIDVKPLVTHRFGFSQK**********************
Disordered Region (DISOPRED)
********************AWLLGVNTLKIQPFELPSLGPYDVLVRMKAVGICGSDVHYLKTLRCADFVVKEPMVIGHECAGVIEKVGSEVKTLVPGDRVALEPGISCWRCDHCKGGRYNLCPEMKFFATPPVHGSLANQVVHPADLCFKLPDNVSLEEGAMCEPLSVGLHACRRANIGPETNVLIMGAGPIGLVTMLGAPRAFGAPRIVIVDVDDYRLSVAKEIGADNIVKVSTNLQDIAEEVEKIQKAMGTGIDVSFDCAGLNKTMSTALGATCAGGKVCLVGMGHHEMTVPLTPAAVREVDVVGVFRYKNTWPLCLELLRSGKIDVKPLVTHRFGFSQKEVEEAFETSARGGTAIKVMFNL
Disordered Region (DISEMBL)
**************EEVNMAAWLLGVNTLKIQPFELPSLGPYDVLVRMKAVGICGSDVHYLKTLRCADFVVKEPMVIGHECAGVIEKVGSEVKTLVPGDRVALEPGISCWRCDHCKGGRYNLCPEMKFFATPPVHGSLANQVVHPADLCFKLPDNVSLEEGAMCEPLSVGLHACRRANIGPETNVLIMGAGPIGLVTMLGAPRAFGAPRIVIVDVDDYRLSVAKEIGADNIVKVSTNLQDIAEEVEKIQKAMGTGIDVSFDCAGLNKTMSTALGATCAGGKVCLVGMGHHEMTVPLTPAAVREVDVVGVFRYKNTWPLCLELLRSGKIDVKPLVTHRFGFSQKEVEEAFETSARGGTAIKVMFNL
Disordered Region (DISPRO)
*************GEEVNMAAWLLGVNTLKIQPFELPSLGPYDVLVRMKAVGICGSDVHYLKTLRCADFVVKEPMVIGHECAGVIEKVGSEVKTLVPGDRVALEPGISCWRCDHCKGGRYNLCPEMKFFATPPVHGSLANQVVHPADLCFKLPDNVSLEEGAMCEPLSVGLHACRRANIGPETNVLIMGAGPIGLVTMLGAPRAFGAPRIVIVDVDDYRLSVAKEIGADNIVKVSTNLQDIAEEVEKIQKAMGTGIDVSFDCAGLNKTMSTALGATCAGGKVCLVGMGHHEMTVPLTPAAVREVDVVGVFRYKNTWPLCLELLRSGKIDVKPLVTHRFGFSQKEVEEAFETSARGGTAIKVMFNL
Transmembrane Helix (TMHMM)
ooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooo
Transmembrane Helix (HMMTOP)
ooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooo
Transmembrane Helix (MEMSAT)
oooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooohhhhhhhhhhhhhhhhhhhhiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiii
TM Helix, Signal Peptide (MEMSAT_SVM)
iiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiihhhhhhhhhhhhhhhhhhhooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooo
TM Helix, Signal Peptide (Phobius)
ooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooo
Signal Peptide (SignalP HMM Mode)
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Signal Peptide (SignalP NN Mode)
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Coiled Coils (COILS)
MGKGGMSQGEKEDGEEVNMAAWLLGVNTLKIQPFELPSLGPYDVLVRMKAVGICGSDVHYLKTLRCADFVVKEPMVIGHECAGVIEKVGSEVKTLVPGDRVALEPGISCWRCDHCKGGRYNLCPEMKFFATPPVHGSLANQVVHPADLCFKLPDNVSLEEGAMCEPLSVGLHACRRANIGPETNVLIMGAGPIGLVTMLGAPRAFGAPRIVIVDVDDYRLSVAKEIGADNxxxxxxxxxxxxxxxxxxxxxMGTGIDVSFDCAGLNKTMSTALGATCAGGKVCLVGMGHHEMTVPLTPAAVREVDVVGVFRYKNTWPLCLELLRSGKIDVKPLVTHRFGFSQKEVEEAFETSARGGTAIKVMFNL
Positional Conservation
no confident homologs detected

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Close Homologs for Annotation Transfer

Close Homologs in SWISS-PROT Database Detected by BLAST

Original result of BLAST against SWISS-PROT Database

ID	Length	Definition	RBH(Q2H)	RBH(H2Q)	Q cover	H cover	Identity	E-value
Query	365	2.2.26 [Sep-21-2011]
Q1PSI9	366	L-idonate 5-dehydrogenase	no	no	0.994	0.991	0.790	1e-173
Q58D31	356	Sorbitol dehydrogenase OS	yes	no	0.928	0.952	0.492	2e-88
P27867	357	Sorbitol dehydrogenase OS	yes	no	0.931	0.952	0.494	4e-88
Q64442	357	Sorbitol dehydrogenase OS	yes	no	0.931	0.952	0.488	9e-88
Q00796	357	Sorbitol dehydrogenase OS	yes	no	0.931	0.952	0.488	7e-87
Q5R5F3	357	Sorbitol dehydrogenase OS	yes	no	0.931	0.952	0.485	1e-86
P07846	354	Sorbitol dehydrogenase OS	N/A	no	0.926	0.954	0.487	2e-86
Q4R639	357	Sorbitol dehydrogenase OS	N/A	no	0.931	0.952	0.482	3e-86
A1CFY8	358	Probable D-xylulose reduc	N/A	no	0.923	0.941	0.427	3e-71
Q86ZV0	358	D-xylulose reductase A OS	no	no	0.931	0.949	0.422	3e-71

>sp|Q1PSI9|IDND_VITVI L-idonate 5-dehydrogenase OS=Vitis vinifera GN=VIT_16s0100g00290 PE=1 SV=2

 Score =  607 bits (1565), Expect = e-173,   Method: Compositional matrix adjust.
 Identities = 291/368 (79%), Positives = 328/368 (89%), Gaps = 5/368 (1%)

Query: 1   MGKGGMSQGE---KEDGEEVNMAAWLLGVNTLKIQPFELPSLGPYDVLVRMKAVGICGSD 57
           MGKGG S+     KE GEE NMAAWLLG+ TLKIQP+ LPSLGPYDV VR+KAVGICGSD
Sbjct: 1   MGKGGNSEDAVSGKEHGEE-NMAAWLLGIKTLKIQPYILPSLGPYDVKVRIKAVGICGSD 59

Query: 58  VHYLKTLRCADFVVKEPMVIGHECAGVIEKVGSEVKTLVPGDRVALEPGISCWRCDHCKG 117
           VH+ KT+RCA+F+VK+PMVIGHECAG+IE+VGSEVK LV GDRVALEPGISC RC  C+ 
Sbjct: 60  VHHFKTMRCANFIVKKPMVIGHECAGIIEEVGSEVKNLVAGDRVALEPGISCNRCSLCRN 119

Query: 118 GRYNLCPEMKFFATPPVHGSLANQVVHPADLCFKLPDNVSLEEGAMCEPLSVGLHACRRA 177
           G+YNLC EMKFF +PP +GSLANQVVHP++LCFKLPDNVSLEEGAMCEPLSVG+HACRRA
Sbjct: 120 GQYNLCREMKFFGSPPTNGSLANQVVHPSNLCFKLPDNVSLEEGAMCEPLSVGIHACRRA 179

Query: 178 NIGPETNVLIMGAGPIGLVTMLGAPRAFGAPRIVIVDVDDYRLSVAKEIGADNIVKVSTN 237
           N+GPETNVLIMG+GPIGLVTML A RAFGAPRIV+VDVDD RL++AK++GAD+I++VSTN
Sbjct: 180 NVGPETNVLIMGSGPIGLVTMLAA-RAFGAPRIVLVDVDDQRLAIAKDLGADDIIRVSTN 238

Query: 238 LQDIAEEVEKIQKAMGTGIDVSFDCAGLNKTMSTALGATCAGGKVCLVGMGHHEMTVPLT 297
           +QD+ EEV KIQ  M TG+DVSFDC G NKTMSTAL AT AGGKVCLVG+   EMTVPLT
Sbjct: 239 IQDLDEEVAKIQSTMVTGVDVSFDCVGFNKTMSTALNATRAGGKVCLVGLAQSEMTVPLT 298

Query: 298 PAAVREVDVVGVFRYKNTWPLCLELLRSGKIDVKPLVTHRFGFSQKEVEEAFETSARGGT 357
           PAA REVD+VG+FRY+NTWPLCLE LRSGKIDVKPL+THRF FSQK+VEEAFETSARGG 
Sbjct: 299 PAAAREVDIVGIFRYRNTWPLCLEFLRSGKIDVKPLITHRFTFSQKDVEEAFETSARGGN 358

Query: 358 AIKVMFNL 365
           AIKVMFNL
Sbjct: 359 AIKVMFNL 366

Involved in the catabolism of ascorbate to tartrate. The enzyme has no activity with NADP(+).
Vitis vinifera (taxid: 29760)
EC: 1EC: .EC: 1EC: .EC: 1EC: .EC: nEC: 8

>sp|Q58D31|DHSO_BOVIN Sorbitol dehydrogenase OS=Bos taurus GN=SORD PE=2 SV=3

 Score =  325 bits (834), Expect = 2e-88,   Method: Compositional matrix adjust.
 Identities = 171/347 (49%), Positives = 239/347 (68%), Gaps = 8/347 (2%)

Query: 18  NMAAWLLGVNTLKIQPFELPSLGPYDVLVRMKAVGICGSDVHYLKTLRCADFVVKEPMVI 77
           N++  + G   L+++ + +P  GP +VL++M +VGICGSDVHY +  R  DFVVK+PMV+
Sbjct: 8   NLSLVVHGPGDLRLENYPIPEPGPNEVLLKMHSVGICGSDVHYWQHGRIGDFVVKKPMVL 67

Query: 78  GHECAGVIEKVGSEVKTLVPGDRVALEPGISCWRCDHCKGGRYNLCPEMKFFATPPVHGS 137
           GHE +G + KVGS V+ L PGDRVA+EPG      + CK GRYNL P + F ATPP  G+
Sbjct: 68  GHEASGTVVKVGSLVRHLQPGDRVAIEPGAPRETDEFCKIGRYNLSPTIFFCATPPDDGN 127

Query: 138 LANQVVHPADLCFKLPDNVSLEEGAMCEPLSVGLHACRRANIGPETNVLIMGAGPIGLVT 197
           L     H A+ C+KLPDNV+ EEGA+ EPLSVG+HACRRA +     VL+ GAGPIGLV+
Sbjct: 128 LCRFYKHNANFCYKLPDNVTFEEGALIEPLSVGIHACRRAGVTLGNKVLVCGAGPIGLVS 187

Query: 198 MLGAPRAFGAPRIVIVDVDDYRLSVAKEIGADNIVKVST-NLQDIAEEVEKIQKAMGTGI 256
           +L A +A GA ++V+ D+   RLS AKE+GAD I+++S  + Q+IA++VE +   +G+  
Sbjct: 188 LLAA-KAMGAAQVVVTDLSASRLSKAKEVGADFILQISNESPQEIAKKVEGL---LGSKP 243

Query: 257 DVSFDCAGLNKTMSTALGATCAGGKVCLVGMGHHEMTVPLTPAAVREVDVVGVFRYKNTW 316
           +V+ +C G+  ++   + AT +GG + LVG+G    +VPL  AA REVD+ GVFRY NTW
Sbjct: 244 EVTIECTGVETSIQAGIYATHSGGTLVLVGLGSEMTSVPLVHAATREVDIKGVFRYCNTW 303

Query: 317 PLCLELLRSGKIDVKPLVTHRFGFSQKEVEEAFETSARGGTAIKVMF 363
           P+ + +L S  ++VKPLVTHRF    ++  EAFETS + G  +KVM 
Sbjct: 304 PMAISMLASKSVNVKPLVTHRFPL--EKALEAFETSKK-GLGLKVMI 347

Converts sorbitol to fructose. Part of the polyol pathway that plays an important role in sperm physiology. May play a role in the sperm motility by providing an energetic source for sperm.

Bos taurus (taxid: 9913)

EC: 1

EC: .

EC: 1

EC: .

EC: 1

EC: .

EC: 1

EC: 4

>sp|P27867|DHSO_RAT Sorbitol dehydrogenase OS=Rattus norvegicus GN=Sord PE=1 SV=4

 Score =  325 bits (832), Expect = 4e-88,   Method: Compositional matrix adjust.
 Identities = 172/348 (49%), Positives = 240/348 (68%), Gaps = 8/348 (2%)

Query: 18  NMAAWLLGVNTLKIQPFELPSLGPYDVLVRMKAVGICGSDVHYLKTLRCADFVVKEPMVI 77
           N++  + G   ++++ + +P LGP DVL++M +VGICGSDVHY +  R  DFVVK+PMV+
Sbjct: 9   NLSLVVHGPGDIRLENYPIPELGPNDVLLKMHSVGICGSDVHYWEHGRIGDFVVKKPMVL 68

Query: 78  GHECAGVIEKVGSEVKTLVPGDRVALEPGISCWRCDHCKGGRYNLCPEMKFFATPPVHGS 137
           GHE AG + KVG  VK L PGDRVA+EPG+     + CK GRYNL P + F ATPP  G+
Sbjct: 69  GHEAAGTVTKVGPMVKHLKPGDRVAIEPGVPREIDEFCKIGRYNLTPSIFFCATPPDDGN 128

Query: 138 LANQVVHPADLCFKLPDNVSLEEGAMCEPLSVGLHACRRANIGPETNVLIMGAGPIGLVT 197
           L     H AD C+KLPD+V+ EEGA+ EPLSVG++ACRR ++     VL+ GAGPIG+VT
Sbjct: 129 LCRFYKHSADFCYKLPDSVTFEEGALIEPLSVGIYACRRGSVSLGNKVLVCGAGPIGIVT 188

Query: 198 MLGAPRAFGAPRIVIVDVDDYRLSVAKEIGADNIVKVSTNL-QDIAEEVEKIQKAMGTGI 256
           +L A +A GA ++V++D+   RL+ AKE+GAD  ++V+     DIA++VE +   +G+  
Sbjct: 189 LLVA-KAMGASQVVVIDLSASRLAKAKEVGADFTIQVAKETPHDIAKKVESV---LGSKP 244

Query: 257 DVSFDCAGLNKTMSTALGATCAGGKVCLVGMGHHEMTVPLTPAAVREVDVVGVFRYKNTW 316
           +V+ +C G   ++ T + AT +GG + +VGMG   + +PL  AAVREVD+ GVFRY NTW
Sbjct: 245 EVTIECTGAESSVQTGIYATHSGGTLVVVGMGPEMINLPLVHAAVREVDIKGVFRYCNTW 304

Query: 317 PLCLELLRSGKIDVKPLVTHRFGFSQKEVEEAFETSARGGTAIKVMFN 364
           P+ + +L S  ++VKPLVTHRF   +K V EAFET A+ G  +KVM  
Sbjct: 305 PMAVSMLASKTLNVKPLVTHRFPL-EKAV-EAFET-AKKGLGLKVMIK 349

Converts sorbitol to fructose. Part of the polyol pathway that plays an important role in sperm physiology. May play a role in the sperm motility by providing an energetic source for sperm.

Rattus norvegicus (taxid: 10116)

EC: 1

EC: .

EC: 1

EC: .

EC: 1

EC: .

EC: 1

EC: 4

>sp|Q64442|DHSO_MOUSE Sorbitol dehydrogenase OS=Mus musculus GN=Sord PE=1 SV=3

 Score =  323 bits (829), Expect = 9e-88,   Method: Compositional matrix adjust.
 Identities = 170/348 (48%), Positives = 239/348 (68%), Gaps = 8/348 (2%)

Query: 18  NMAAWLLGVNTLKIQPFELPSLGPYDVLVRMKAVGICGSDVHYLKTLRCADFVVKEPMVI 77
           N++  + G   ++++ + +P LGP DVL++M +VGICGSDVHY +  R  DFVVK+PMV+
Sbjct: 9   NLSLVVHGPGDIRLENYPIPELGPNDVLLKMHSVGICGSDVHYWEHGRIGDFVVKKPMVL 68

Query: 78  GHECAGVIEKVGSEVKTLVPGDRVALEPGISCWRCDHCKGGRYNLCPEMKFFATPPVHGS 137
           GHE AG + KVG  VK L PGDRVA+EPG+     ++CK GRYNL P + F ATPP  G+
Sbjct: 69  GHEAAGTVTKVGELVKHLKPGDRVAIEPGVPREVDEYCKIGRYNLTPTIFFCATPPDDGN 128

Query: 138 LANQVVHPADLCFKLPDNVSLEEGAMCEPLSVGLHACRRANIGPETNVLIMGAGPIGLVT 197
           L     H AD C+KLPD+V+ EEGA+ EPLSVG++ACRR ++     VL+ GAGP+G+VT
Sbjct: 129 LCRFYKHNADFCYKLPDSVTFEEGALIEPLSVGIYACRRGSVSLGNKVLVCGAGPVGMVT 188

Query: 198 MLGAPRAFGAPRIVIVDVDDYRLSVAKEIGADNIVKVSTNL-QDIAEEVEKIQKAMGTGI 256
           +L A +A GA ++V+ D+   RL+ AKE+GAD  ++V     Q+IA +VE +   +G+  
Sbjct: 189 LLVA-KAMGAAQVVVTDLSASRLTKAKEVGADFTIQVGKETPQEIASKVESL---LGSKP 244

Query: 257 DVSFDCAGLNKTMSTALGATCAGGKVCLVGMGHHEMTVPLTPAAVREVDVVGVFRYKNTW 316
           +V+ +C G   ++ T + AT +GG + +VGMG   + +PL  AA+REVD+ GVFRY NTW
Sbjct: 245 EVTIECTGAESSVQTGIYATHSGGTLVIVGMGAEMVNLPLVHAAIREVDIKGVFRYCNTW 304

Query: 317 PLCLELLRSGKIDVKPLVTHRFGFSQKEVEEAFETSARGGTAIKVMFN 364
           P+ + +L S  ++VKPLVTHRF   +K V EAFET A+ G  +KVM  
Sbjct: 305 PMAISMLASKTLNVKPLVTHRFPL-EKAV-EAFET-AKKGVGLKVMIK 349

Converts sorbitol to fructose. Part of the polyol pathway that plays an important role in sperm physiology. May play a role in the sperm motility by providing an energetic source for sperm.

Mus musculus (taxid: 10090)

EC: 1

EC: .

EC: 1

EC: .

EC: 1

EC: .

EC: 1

EC: 4

>sp|Q00796|DHSO_HUMAN Sorbitol dehydrogenase OS=Homo sapiens GN=SORD PE=1 SV=4

 Score =  320 bits (821), Expect = 7e-87,   Method: Compositional matrix adjust.
 Identities = 170/348 (48%), Positives = 234/348 (67%), Gaps = 8/348 (2%)

Query: 18  NMAAWLLGVNTLKIQPFELPSLGPYDVLVRMKAVGICGSDVHYLKTLRCADFVVKEPMVI 77
           N++  + G   L+++ + +P  GP +VL+RM +VGICGSDVHY +  R  +F+VK+PMV+
Sbjct: 9   NLSLVVHGPGDLRLENYPIPEPGPNEVLLRMHSVGICGSDVHYWEYGRIGNFIVKKPMVL 68

Query: 78  GHECAGVIEKVGSEVKTLVPGDRVALEPGISCWRCDHCKGGRYNLCPEMKFFATPPVHGS 137
           GHE +G +EKVGS VK L PGDRVA+EPG      + CK GRYNL P + F ATPP  G+
Sbjct: 69  GHEASGTVEKVGSSVKHLKPGDRVAIEPGAPRENDEFCKMGRYNLSPSIFFCATPPDDGN 128

Query: 138 LANQVVHPADLCFKLPDNVSLEEGAMCEPLSVGLHACRRANIGPETNVLIMGAGPIGLVT 197
           L     H A  C+KLPDNV+ EEGA+ EPLSVG+HACRR  +     VL+ GAGPIG+VT
Sbjct: 129 LCRFYKHNAAFCYKLPDNVTFEEGALIEPLSVGIHACRRGGVTLGHKVLVCGAGPIGMVT 188

Query: 198 MLGAPRAFGAPRIVIVDVDDYRLSVAKEIGADNIVKVST-NLQDIAEEVEKIQKAMGTGI 256
           +L A +A GA ++V+ D+   RLS AKEIGAD ++++S  + Q+IA +VE     +G   
Sbjct: 189 LLVA-KAMGAAQVVVTDLSATRLSKAKEIGADLVLQISKESPQEIARKVE---GQLGCKP 244

Query: 257 DVSFDCAGLNKTMSTALGATCAGGKVCLVGMGHHEMTVPLTPAAVREVDVVGVFRYKNTW 316
           +V+ +C G   ++   + AT +GG + LVG+G    TVPL  AA+REVD+ GVFRY NTW
Sbjct: 245 EVTIECTGAEASIQAGIYATRSGGNLVLVGLGSEMTTVPLLHAAIREVDIKGVFRYCNTW 304

Query: 317 PLCLELLRSGKIDVKPLVTHRFGFSQKEVEEAFETSARGGTAIKVMFN 364
           P+ + +L S  ++VKPLVTHRF    ++  EAFET  + G  +K+M  
Sbjct: 305 PVAISMLASKSVNVKPLVTHRFPL--EKALEAFETFKK-GLGLKIMLK 349

Converts sorbitol to fructose. Part of the polyol pathway that plays an important role in sperm physiology. May play a role in the sperm motility by providing an energetic source for sperm.

Homo sapiens (taxid: 9606)

EC: 1

EC: .

EC: 1

EC: .

EC: 1

EC: .

EC: 1

EC: 4

>sp|Q5R5F3|DHSO_PONAB Sorbitol dehydrogenase OS=Pongo abelii GN=SORD PE=2 SV=1

 Score =  320 bits (820), Expect = 1e-86,   Method: Compositional matrix adjust.
 Identities = 169/348 (48%), Positives = 235/348 (67%), Gaps = 8/348 (2%)

Query: 18  NMAAWLLGVNTLKIQPFELPSLGPYDVLVRMKAVGICGSDVHYLKTLRCADFVVKEPMVI 77
           N++  + G   L+++ + +P  GP +VL+RM +VGICGSDVHY +  R  +F+VK+PMV+
Sbjct: 9   NLSLVVHGPGDLRLENYPIPEPGPNEVLLRMHSVGICGSDVHYWEDGRIGNFIVKKPMVL 68

Query: 78  GHECAGVIEKVGSEVKTLVPGDRVALEPGISCWRCDHCKGGRYNLCPEMKFFATPPVHGS 137
           GHE +G +EKVGS VK L PGDRVA+EPG      + CK GRYNL P + F ATPP  G+
Sbjct: 69  GHEASGTVEKVGSLVKHLKPGDRVAIEPGAPRENDEFCKIGRYNLSPSIFFCATPPDDGN 128

Query: 138 LANQVVHPADLCFKLPDNVSLEEGAMCEPLSVGLHACRRANIGPETNVLIMGAGPIGLVT 197
           L     H A  C+KLPDNV+ EEGAM EPLSVG+HACRR  +     VL+ GAGPIG+VT
Sbjct: 129 LCRFYKHNAAFCYKLPDNVTFEEGAMIEPLSVGIHACRRGGVTLGHKVLVCGAGPIGMVT 188

Query: 198 MLGAPRAFGAPRIVIVDVDDYRLSVAKEIGADNIVKVST-NLQDIAEEVEKIQKAMGTGI 256
           +L A +A GA ++V+ D+   RLS AKEIGAD ++++S  + Q+IA +VE +   +G   
Sbjct: 189 LLVA-KAMGAAQVVVTDLSATRLSKAKEIGADLVLQISKESPQEIARKVEGL---LGCKP 244

Query: 257 DVSFDCAGLNKTMSTALGATCAGGKVCLVGMGHHEMTVPLTPAAVREVDVVGVFRYKNTW 316
           +V+ +C G   ++   + AT +GG + LVG+G    T+PL  AA+REVD+ GVFRY NTW
Sbjct: 245 EVTIECTGAGASIQAGIYATHSGGTLVLVGLGSEMTTIPLLHAAIREVDIKGVFRYCNTW 304

Query: 317 PLCLELLRSGKIDVKPLVTHRFGFSQKEVEEAFETSARGGTAIKVMFN 364
           P+ + +L S  ++VKPL+THRF    ++  EAFET  + G  +K+M  
Sbjct: 305 PVAISMLASKSVNVKPLITHRFPL--EKALEAFETFKK-GLGLKIMLK 349

Converts sorbitol to fructose. Part of the polyol pathway that plays an important role in sperm physiology. May play a role in the sperm motility by providing an energetic source for sperm.

Pongo abelii (taxid: 9601)

EC: 1

EC: .

EC: 1

EC: .

EC: 1

EC: .

EC: 1

EC: 4

>sp|P07846|DHSO_SHEEP Sorbitol dehydrogenase OS=Ovis aries GN=SORD PE=1 SV=1

 Score =  319 bits (818), Expect = 2e-86,   Method: Compositional matrix adjust.
 Identities = 169/347 (48%), Positives = 238/347 (68%), Gaps = 9/347 (2%)

Query: 18  NMAAWLLGVNTLKIQPFELPSLGPYDVLVRMKAVGICGSDVHYLKTLRCADFVVKEPMVI 77
           N++  + G   L+++ + +P  GP +VL++M +VGICGSDVHY +  R  DFVVK+PMV+
Sbjct: 7   NLSLVVHGPGDLRLENYPIPEPGPNEVLLKMHSVGICGSDVHYWQG-RIGDFVVKKPMVL 65

Query: 78  GHECAGVIEKVGSEVKTLVPGDRVALEPGISCWRCDHCKGGRYNLCPEMKFFATPPVHGS 137
           GHE +G + KVGS V+ L PGDRVA++PG      + CK GRYNL P + F ATPP  G+
Sbjct: 66  GHEASGTVVKVGSLVRHLQPGDRVAIQPGAPRQTDEFCKIGRYNLSPTIFFCATPPDDGN 125

Query: 138 LANQVVHPADLCFKLPDNVSLEEGAMCEPLSVGLHACRRANIGPETNVLIMGAGPIGLVT 197
           L     H A+ C+KLPDNV+ EEGA+ EPLSVG+HACRRA +     VL+ GAGPIGLV 
Sbjct: 126 LCRFYKHNANFCYKLPDNVTFEEGALIEPLSVGIHACRRAGVTLGNKVLVCGAGPIGLVN 185

Query: 198 MLGAPRAFGAPRIVIVDVDDYRLSVAKEIGADNIVKVST-NLQDIAEEVEKIQKAMGTGI 256
           +L A +A GA ++V+ D+   RLS AKE+GAD I+++S  + ++IA++VE +   +G+  
Sbjct: 186 LLAA-KAMGAAQVVVTDLSASRLSKAKEVGADFILEISNESPEEIAKKVEGL---LGSKP 241

Query: 257 DVSFDCAGLNKTMSTALGATCAGGKVCLVGMGHHEMTVPLTPAAVREVDVVGVFRYKNTW 316
           +V+ +C G+  ++   + AT +GG + LVG+G    +VPL  AA REVD+ GVFRY NTW
Sbjct: 242 EVTIECTGVETSIQAGIYATHSGGTLVLVGLGSEMTSVPLVHAATREVDIKGVFRYCNTW 301

Query: 317 PLCLELLRSGKIDVKPLVTHRFGFSQKEVEEAFETSARGGTAIKVMF 363
           P+ + +L S  ++VKPLVTHRF    ++  EAFETS + G  +KVM 
Sbjct: 302 PMAISMLASKSVNVKPLVTHRFPL--EKALEAFETSKK-GLGLKVMI 345

Converts sorbitol to fructose. Part of the polyol pathway that plays an important role in sperm physiology. May play a role in the sperm motility by providing an energetic source for sperm.

Ovis aries (taxid: 9940)

EC: 1

EC: .

EC: 1

EC: .

EC: 1

EC: .

EC: 1

EC: 4

>sp|Q4R639|DHSO_MACFA Sorbitol dehydrogenase OS=Macaca fascicularis GN=SORD PE=2 SV=3

 Score =  318 bits (816), Expect = 3e-86,   Method: Compositional matrix adjust.
 Identities = 168/348 (48%), Positives = 236/348 (67%), Gaps = 8/348 (2%)

Query: 18  NMAAWLLGVNTLKIQPFELPSLGPYDVLVRMKAVGICGSDVHYLKTLRCADFVVKEPMVI 77
           N++  + G   L+++ + +P  GP +VL+RM +VGICGSDVHY +  R  +F+VK+PMV+
Sbjct: 9   NLSLVVHGPGDLRLENYPIPEPGPNEVLLRMHSVGICGSDVHYWEEGRIGNFIVKKPMVL 68

Query: 78  GHECAGVIEKVGSEVKTLVPGDRVALEPGISCWRCDHCKGGRYNLCPEMKFFATPPVHGS 137
           GHE +G +EKVGS VK L PGDRVA+EPG+     + CK GRYNL P + F ATPP  G+
Sbjct: 69  GHEASGTVEKVGSLVKHLKPGDRVAIEPGVPRENDEFCKSGRYNLSPSIFFCATPPDDGN 128

Query: 138 LANQVVHPADLCFKLPDNVSLEEGAMCEPLSVGLHACRRANIGPETNVLIMGAGPIGLVT 197
           L     H A  C+KLPDNV+ EEGA+ EPLSVG+HACRR  +     VL+ GAGPIG+V+
Sbjct: 129 LCRFYKHNAAFCYKLPDNVTFEEGALIEPLSVGIHACRRGGVTLGHRVLVCGAGPIGVVS 188

Query: 198 MLGAPRAFGAPRIVIVDVDDYRLSVAKEIGADNIVKVST-NLQDIAEEVEKIQKAMGTGI 256
           +L A +A GA ++V+ D+   RLS AKEIGAD ++++S  + Q+IA +VE +   +G   
Sbjct: 189 LLVA-KAMGAAQVVVTDLSAPRLSKAKEIGADLVLQISKESPQEIAGKVEGL---LGCKP 244

Query: 257 DVSFDCAGLNKTMSTALGATCAGGKVCLVGMGHHEMTVPLTPAAVREVDVVGVFRYKNTW 316
           +V+ +C G   ++   + AT +GG + LVG+G    T+PL  AAVREVD+ GVFRY NTW
Sbjct: 245 EVTIECTGAEASIQAGIYATRSGGTLVLVGLGSEMTTIPLLHAAVREVDIKGVFRYCNTW 304

Query: 317 PLCLELLRSGKIDVKPLVTHRFGFSQKEVEEAFETSARGGTAIKVMFN 364
           P+ + +L S  +++KPLVTHRF    ++  EAFET  + G  +K+M  
Sbjct: 305 PVAISMLASKSVNIKPLVTHRFPL--EKALEAFETFKK-GLGLKIMLK 349

Converts sorbitol to fructose. Part of the polyol pathway that plays an important role in sperm physiology. May play a role in the sperm motility by providing an energetic source for sperm.

Macaca fascicularis (taxid: 9541)

EC: 1

EC: .

EC: 1

EC: .

EC: 1

EC: .

EC: 1

EC: 4

>sp|A1CFY8|XYL2_ASPCL Probable D-xylulose reductase A OS=Aspergillus clavatus (strain ATCC 1007 / CBS 513.65 / DSM 816 / NCTC 3887 / NRRL 1) GN=xdhA PE=3 SV=2

 Score =  269 bits (687), Expect = 3e-71,   Method: Compositional matrix adjust.
 Identities = 151/353 (42%), Positives = 215/353 (60%), Gaps = 16/353 (4%)

Query: 18  NMAAWLLGVNTLKIQPFELPSL-GPYDVLVRMKAVGICGSDVHYLKTLRCADFVVKEPMV 76
           N++  L G++ +K +   +P L  P+DV+V +K  GICGSDVHY +      FVVK+PMV
Sbjct: 10  NLSFVLEGIHQVKFEDRPIPELRDPHDVIVNVKYTGICGSDVHYWEHGAIGHFVVKDPMV 69

Query: 77  IGHECAGVIEKVGSEVKTLVPGDRVALEPGISCWRCDHCKGGRYNLCPEMKFFATPPVHG 136
           +GHE +GV+ KVGS V +L  GDRVA+EPG+ C RC+ CK G+YNLC +M F ATPP  G
Sbjct: 70  LGHESSGVVAKVGSAVTSLKVGDRVAMEPGVPCRRCEPCKAGKYNLCEKMAFAATPPYDG 129

Query: 137 SLANQVVHPADLCFKLPDNVSLEEGAMCEPLSVGLHACRRANIGPETNVLIMGAGPIGLV 196
           +LA     P D C+KLP+N+SL+EGA+ EPL V +H  R+A+I P  +V++ GAGP+GL+
Sbjct: 130 TLAKYYPLPEDFCYKLPENISLQEGALMEPLGVAVHITRQASIKPGESVVVFGAGPVGLL 189

Query: 197 TMLGAPRAFGAPRIVIVDVDDYRLSVAKEIGADNI---VKVS--TNLQDIAEEVEKIQKA 251
               A RAFGA +I+ VD+   RL  AK+  A  I    KVS   N   + EE +     
Sbjct: 190 CCAVA-RAFGASKIIAVDIQKTRLDFAKKYAATAIFEPAKVSAVANADQMREEND----- 243

Query: 252 MGTGIDVSFDCAGLNKTMSTALGATCAGGKVCLVGMGHHEMTVPLTPAAVREVDVVGVFR 311
           +G G DV  D +G   ++ T +     GG     GMG +E+  P+  A  +E+ + G FR
Sbjct: 244 LGPGADVVIDASGAEPSVHTGIHVLRPGGTYVQGGMGRNEINFPIMAACTKELTIKGSFR 303

Query: 312 Y-KNTWPLCLELLRSGKIDVKPLVTHRFGFSQKEVEEAFETSARGGTAIKVMF 363
           Y    + L ++L+ SGK++VK L+T    F  +E E+AF+   + G  IK + 
Sbjct: 304 YGSGDYKLAVDLVASGKVNVKDLITGVVEF--QEAEQAFK-EVKAGKGIKTLI 353

Xylitol dehydrogenase which catalyzes the conversion of xylitol to D-xylulose. Xylose is a major component of hemicelluloses such as xylan. Most fungi utilize D-xylose via three enzymatic reactions, xylose reductase (XR), xylitol dehydrogenase (XDH), and xylulokinase, to form xylulose 5-phosphate, which enters pentose phosphate pathway.

Aspergillus clavatus (strain ATCC 1007 / CBS 513.65 / DSM 816 / NCTC 3887 / NRRL 1) (taxid: 344612)

EC: 1

EC: .

EC: 1

EC: .

EC: 1

EC: .

EC: 9

>sp|Q86ZV0|XYL2_ASPOR D-xylulose reductase A OS=Aspergillus oryzae (strain ATCC 42149 / RIB 40) GN=xdhA PE=3 SV=2

 Score =  269 bits (687), Expect = 3e-71,   Method: Compositional matrix adjust.
 Identities = 148/350 (42%), Positives = 213/350 (60%), Gaps = 10/350 (2%)

Query: 18  NMAAWLLGVNTLKIQPFELPSL-GPYDVLVRMKAVGICGSDVHYLKTLRCADFVVKEPMV 76
           N++  L G++ +K +   +P L   +DVLV ++  GICGSDVHY +      FVVK+PMV
Sbjct: 10  NLSFVLEGIHKVKFEDRPIPQLRDAHDVLVDVRFTGICGSDVHYWEHGSIGQFVVKDPMV 69

Query: 77  IGHECAGVIEKVGSEVKTLVPGDRVALEPGISCWRCDHCKGGRYNLCPEMKFFATPPVHG 136
           +GHE +GVI KVGS V TL  GD VA+EPGI C RC+ CK G+YNLC +M F ATPP  G
Sbjct: 70  LGHESSGVISKVGSAVTTLKVGDHVAMEPGIPCRRCEPCKEGKYNLCEKMAFAATPPYDG 129

Query: 137 SLANQVVHPADLCFKLPDNVSLEEGAMCEPLSVGLHACRRANIGPETNVLIMGAGPIGLV 196
           +LA   V P D C+KLP+N++L+E A+ EPLSV +H  ++AN+ P  +V++ GAGP+GL+
Sbjct: 130 TLAKYYVLPEDFCYKLPENINLQEAAVMEPLSVAVHIVKQANVAPGQSVVVFGAGPVGLL 189

Query: 197 TMLGAPRAFGAPRIVIVDVDDYRLSVAKEIGADNIVKVSTNLQDIAEEVEKI--QKAMGT 254
               A RAFG+P+++ VD+   RL  AK+  A  I + S       E  E+I  +  +G 
Sbjct: 190 CCAVA-RAFGSPKVIAVDIQKGRLEFAKKYAATAIFEPSK--VSALENAERIVNENDLGR 246

Query: 255 GIDVSFDCAGLNKTMSTALGATCAGGKVCLVGMGHHEMTVPLTPAAVREVDVVGVFRY-K 313
           G D+  D +G   ++ T +     GG     GMG +E+T P+  A  +E++V G FRY  
Sbjct: 247 GADIVIDASGAEPSVHTGIHVLRPGGTYVQGGMGRNEITFPIMAACTKELNVRGSFRYGS 306

Query: 314 NTWPLCLELLRSGKIDVKPLVTHRFGFSQKEVEEAFETSARGGTAIKVMF 363
             + L + L+ SGK+ VK L+T    F  ++ E+AF    + G  IK + 
Sbjct: 307 GDYKLAVNLVASGKVSVKELITGVVSF--EDAEQAFH-EVKAGKGIKTLI 353

Xylitol dehydrogenase which catalyzes the conversion of xylitol to D-xylulose. Xylose is a major component of hemicelluloses such as xylan. Most fungi utilize D-xylose via three enzymatic reactions, xylose reductase (XR), xylitol dehydrogenase (XDH), and xylulokinase, to form xylulose 5-phosphate, which enters pentose phosphate pathway.

Aspergillus oryzae (strain ATCC 42149 / RIB 40) (taxid: 510516)

EC: 1

EC: .

EC: 1

EC: .

EC: 1

EC: .

EC: 9

Close Homologs in the Non-Redundant Database Detected by BLAST

Original result of BLAST against Nonredundant Database

GI	Length	Definition	Q cover	H cover	Identity	E-value
Query	365
255539581	364	alcohol dehydrogenase, putative [Ricinus	0.997	1.0	0.868	0.0
224120122	364	predicted protein [Populus trichocarpa]	0.997	1.0	0.863	0.0
358345351	362	L-idonate 5-dehydrogenase [Medicago trun	0.991	1.0	0.852	0.0
358248648	364	uncharacterized protein LOC100791559 [Gl	0.997	1.0	0.854	0.0
217072128	362	unknown [Medicago truncatula] gi|3885198	0.991	1.0	0.846	0.0
356559880	364	PREDICTED: L-idonate 5-dehydrogenase-lik	0.997	1.0	0.849	0.0
350538545	355	sorbitol related enzyme [Solanum lycoper	0.972	1.0	0.849	0.0
225469310	365	PREDICTED: L-idonate 5-dehydrogenase [Vi	0.997	0.997	0.855	1e-180
15242240	364	L-iditol 2-dehydrogenase [Arabidopsis th	0.997	1.0	0.838	1e-179
21553353	364	sorbitol dehydrogenase-like protein [Ara	0.997	1.0	0.835	1e-179

>gi|255539581|ref|XP_002510855.1| alcohol dehydrogenase, putative [Ricinus communis] gi|223549970|gb|EEF51457.1| alcohol dehydrogenase, putative [Ricinus communis]

 Score =  655 bits (1689), Expect = 0.0,   Method: Compositional matrix adjust.
 Identities = 317/365 (86%), Positives = 340/365 (93%), Gaps = 1/365 (0%)

Query: 1   MGKGGMSQGEKEDGEEVNMAAWLLGVNTLKIQPFELPSLGPYDVLVRMKAVGICGSDVHY 60
           MGKGGMS GE +D +E N+AAWLLGVNTLKIQPF+LPSLGP DV VRMKAVGICGSDVHY
Sbjct: 1   MGKGGMSHGENKDVQEENLAAWLLGVNTLKIQPFKLPSLGPNDVRVRMKAVGICGSDVHY 60

Query: 61  LKTLRCADFVVKEPMVIGHECAGVIEKVGSEVKTLVPGDRVALEPGISCWRCDHCKGGRY 120
           LKTLRCA FVV+EPMVIGHECAG+IE VGSEVK LVPGDRVALEPGISCWRCD CK GRY
Sbjct: 61  LKTLRCAHFVVEEPMVIGHECAGIIEGVGSEVKNLVPGDRVALEPGISCWRCDLCKEGRY 120

Query: 121 NLCPEMKFFATPPVHGSLANQVVHPADLCFKLPDNVSLEEGAMCEPLSVGLHACRRANIG 180
           NLCPEMKFFATPPVHGSLANQVVHPADLCF+LP+NVSLEEGAMCEPLSVG+HACRRANIG
Sbjct: 121 NLCPEMKFFATPPVHGSLANQVVHPADLCFRLPENVSLEEGAMCEPLSVGVHACRRANIG 180

Query: 181 PETNVLIMGAGPIGLVTMLGAPRAFGAPRIVIVDVDDYRLSVAKEIGADNIVKVSTNLQD 240
           PETNVL+MGAGPIGLVTML A RAFGAPRIVIVDVDDYRLSVAK++GAD IVKVST++QD
Sbjct: 181 PETNVLVMGAGPIGLVTMLAA-RAFGAPRIVIVDVDDYRLSVAKDLGADAIVKVSTSIQD 239

Query: 241 IAEEVEKIQKAMGTGIDVSFDCAGLNKTMSTALGATCAGGKVCLVGMGHHEMTVPLTPAA 300
           +A+EV  I KAMGTG+DV+ DCAG NKTMS+AL AT +GGKVCLVGMGH+EMTVPLTPAA
Sbjct: 240 VADEVVLIHKAMGTGVDVTLDCAGFNKTMSSALSATRSGGKVCLVGMGHNEMTVPLTPAA 299

Query: 301 VREVDVVGVFRYKNTWPLCLELLRSGKIDVKPLVTHRFGFSQKEVEEAFETSARGGTAIK 360
            REVDV+GVFRYKNTWPLCLE LRSGKIDVKPL+THRFGFSQKEVE AFETSARGG AIK
Sbjct: 300 AREVDVIGVFRYKNTWPLCLEFLRSGKIDVKPLITHRFGFSQKEVEAAFETSARGGDAIK 359

Query: 361 VMFNL 365
           VMFNL
Sbjct: 360 VMFNL 364

Source: Ricinus communis

Species: Ricinus communis

Genus: Ricinus

Family: Euphorbiaceae

Order: Malpighiales

Phylum: Streptophyta

Superkingdom: Eukaryota

>gi|224120122|ref|XP_002318247.1| predicted protein [Populus trichocarpa] gi|222858920|gb|EEE96467.1| predicted protein [Populus trichocarpa]

 Score =  654 bits (1688), Expect = 0.0,   Method: Compositional matrix adjust.
 Identities = 315/365 (86%), Positives = 340/365 (93%), Gaps = 1/365 (0%)

Query: 1   MGKGGMSQGEKEDGEEVNMAAWLLGVNTLKIQPFELPSLGPYDVLVRMKAVGICGSDVHY 60
           MGKGGMS GE +DGEE NMAAWLLGVNTLKIQPF+LP LGP+DV VRMKAVGICGSDVHY
Sbjct: 1   MGKGGMSHGETKDGEEENMAAWLLGVNTLKIQPFKLPCLGPHDVRVRMKAVGICGSDVHY 60

Query: 61  LKTLRCADFVVKEPMVIGHECAGVIEKVGSEVKTLVPGDRVALEPGISCWRCDHCKGGRY 120
           LKT++CA FVVKEPMVIGHECAG+IE+VGSE+K+LVPGDRVALEPGISCWRC  CK GRY
Sbjct: 61  LKTMKCAHFVVKEPMVIGHECAGIIEEVGSEIKSLVPGDRVALEPGISCWRCYLCKEGRY 120

Query: 121 NLCPEMKFFATPPVHGSLANQVVHPADLCFKLPDNVSLEEGAMCEPLSVGLHACRRANIG 180
           NLCP+MKFFATPPVHGSLANQVVHPADLCFKLPDNVSLEEGAMCEPLSVG+HACRRANIG
Sbjct: 121 NLCPDMKFFATPPVHGSLANQVVHPADLCFKLPDNVSLEEGAMCEPLSVGVHACRRANIG 180

Query: 181 PETNVLIMGAGPIGLVTMLGAPRAFGAPRIVIVDVDDYRLSVAKEIGADNIVKVSTNLQD 240
           PETNVL+MGAGPIGLVT+L A RAFGAPRIVIVDVDDYRLSVAK++GAD IVKVSTNLQD
Sbjct: 181 PETNVLVMGAGPIGLVTLLAA-RAFGAPRIVIVDVDDYRLSVAKDLGADEIVKVSTNLQD 239

Query: 241 IAEEVEKIQKAMGTGIDVSFDCAGLNKTMSTALGATCAGGKVCLVGMGHHEMTVPLTPAA 300
           + +EV  I +AMGTG+DV+FDCAG NKTMSTAL AT  GGKVCL+GMGH+EMTVPLTPAA
Sbjct: 240 VDQEVVLIHQAMGTGVDVTFDCAGFNKTMSTALSATRPGGKVCLIGMGHNEMTVPLTPAA 299

Query: 301 VREVDVVGVFRYKNTWPLCLELLRSGKIDVKPLVTHRFGFSQKEVEEAFETSARGGTAIK 360
            REVDV+GVFRYKNTWPLC+E L SGKIDVKPL+THRFGFSQKEVEEAFETSA G TAIK
Sbjct: 300 AREVDVIGVFRYKNTWPLCIEFLSSGKIDVKPLITHRFGFSQKEVEEAFETSASGSTAIK 359

Query: 361 VMFNL 365
           VMFNL
Sbjct: 360 VMFNL 364

Source: Populus trichocarpa

Species: Populus trichocarpa

Genus: Populus

Family: Salicaceae

Order: Malpighiales

Phylum: Streptophyta

Superkingdom: Eukaryota

>gi|358345351|ref|XP_003636744.1| L-idonate 5-dehydrogenase [Medicago truncatula] gi|355502679|gb|AES83882.1| L-idonate 5-dehydrogenase [Medicago truncatula]

 Score =  652 bits (1681), Expect = 0.0,   Method: Compositional matrix adjust.
 Identities = 311/365 (85%), Positives = 341/365 (93%), Gaps = 3/365 (0%)

Query: 1   MGKGGMSQGEKEDGEEVNMAAWLLGVNTLKIQPFELPSLGPYDVLVRMKAVGICGSDVHY 60
           MGKGGMS    +D E+ NMAAWL+G+NTLKIQPF LPSLGP+DV ++MKAVGICGSDVHY
Sbjct: 1   MGKGGMSV--DDDVEQQNMAAWLVGLNTLKIQPFNLPSLGPHDVRIKMKAVGICGSDVHY 58

Query: 61  LKTLRCADFVVKEPMVIGHECAGVIEKVGSEVKTLVPGDRVALEPGISCWRCDHCKGGRY 120
           LKTLRCADF+VKEPMVIGHECAG+IE+VGS+VKTLVPGDRVA+EPGISCWRCDHCK GRY
Sbjct: 59  LKTLRCADFIVKEPMVIGHECAGIIEEVGSQVKTLVPGDRVAIEPGISCWRCDHCKLGRY 118

Query: 121 NLCPEMKFFATPPVHGSLANQVVHPADLCFKLPDNVSLEEGAMCEPLSVGLHACRRANIG 180
           NLCP+MKFFATPPVHGSLANQ+VHPADLCFKLP+NVSLEEGAMCEPLSVG+HACRRANIG
Sbjct: 119 NLCPDMKFFATPPVHGSLANQIVHPADLCFKLPENVSLEEGAMCEPLSVGVHACRRANIG 178

Query: 181 PETNVLIMGAGPIGLVTMLGAPRAFGAPRIVIVDVDDYRLSVAKEIGADNIVKVSTNLQD 240
           PETNVLIMGAGPIGLVTML A RAFGAPRIV+VDVDD+RLSVAK +GAD+IVKVSTN+QD
Sbjct: 179 PETNVLIMGAGPIGLVTMLSA-RAFGAPRIVVVDVDDHRLSVAKSLGADDIVKVSTNIQD 237

Query: 241 IAEEVEKIQKAMGTGIDVSFDCAGLNKTMSTALGATCAGGKVCLVGMGHHEMTVPLTPAA 300
           +AEEV++I   +G G+DV+FDCAG NKTM+TAL AT  GGKVCLVGMGH EMTVPLTPAA
Sbjct: 238 VAEEVKQIHNVLGAGVDVTFDCAGFNKTMTTALTATQPGGKVCLVGMGHSEMTVPLTPAA 297

Query: 301 VREVDVVGVFRYKNTWPLCLELLRSGKIDVKPLVTHRFGFSQKEVEEAFETSARGGTAIK 360
            REVDVVG+FRYKNTWPLCLE LRSGKIDVKPL+THRFGFSQKEVEEAFETSARGG AIK
Sbjct: 298 AREVDVVGIFRYKNTWPLCLEFLRSGKIDVKPLITHRFGFSQKEVEEAFETSARGGNAIK 357

Query: 361 VMFNL 365
           VMFNL
Sbjct: 358 VMFNL 362

Source: Medicago truncatula

Species: Medicago truncatula

Genus: Medicago

Family: Fabaceae

Order: Fabales

Phylum: Streptophyta

Superkingdom: Eukaryota

>gi|358248648|ref|NP_001239661.1| uncharacterized protein LOC100791559 [Glycine max] gi|255638941|gb|ACU19772.1| unknown [Glycine max]

 Score =  650 bits (1677), Expect = 0.0,   Method: Compositional matrix adjust.
 Identities = 312/365 (85%), Positives = 338/365 (92%), Gaps = 1/365 (0%)

Query: 1   MGKGGMSQGEKEDGEEVNMAAWLLGVNTLKIQPFELPSLGPYDVLVRMKAVGICGSDVHY 60
           MGKGGMS  E  +G+E NMAAWL+G+N+LKIQPF+LP+LGP+DV VRMKAVGICGSDVHY
Sbjct: 1   MGKGGMSIDEHGEGKEENMAAWLVGINSLKIQPFKLPTLGPHDVRVRMKAVGICGSDVHY 60

Query: 61  LKTLRCADFVVKEPMVIGHECAGVIEKVGSEVKTLVPGDRVALEPGISCWRCDHCKGGRY 120
           LKTLRCA F+VKEPMVIGHECAG+IE+VGS+VK+LVPGDRVA+EPGISCWRCDHCK GRY
Sbjct: 61  LKTLRCAHFIVKEPMVIGHECAGIIEEVGSQVKSLVPGDRVAIEPGISCWRCDHCKQGRY 120

Query: 121 NLCPEMKFFATPPVHGSLANQVVHPADLCFKLPDNVSLEEGAMCEPLSVGLHACRRANIG 180
           NLC +MKFFATPPVHGSLANQ+VHPADLCFKLPDNVSLEEGAMCEPLSVG+HACRRANIG
Sbjct: 121 NLCDDMKFFATPPVHGSLANQIVHPADLCFKLPDNVSLEEGAMCEPLSVGVHACRRANIG 180

Query: 181 PETNVLIMGAGPIGLVTMLGAPRAFGAPRIVIVDVDDYRLSVAKEIGADNIVKVSTNLQD 240
           PET VLIMGAGPIGLVTML A RAFGAPR VIVDVDDYRLSVAK +GAD+IVKVSTN+QD
Sbjct: 181 PETYVLIMGAGPIGLVTMLAA-RAFGAPRTVIVDVDDYRLSVAKSLGADDIVKVSTNIQD 239

Query: 241 IAEEVEKIQKAMGTGIDVSFDCAGLNKTMSTALGATCAGGKVCLVGMGHHEMTVPLTPAA 300
           +AEEV +IQK MG  IDV+FDCAG +KTMSTAL AT  GGKVCLVGMGH EMTVPLTPAA
Sbjct: 240 VAEEVVQIQKVMGADIDVTFDCAGFDKTMSTALSATQPGGKVCLVGMGHSEMTVPLTPAA 299

Query: 301 VREVDVVGVFRYKNTWPLCLELLRSGKIDVKPLVTHRFGFSQKEVEEAFETSARGGTAIK 360
            REVDV+GVFRY NTWPLCLE LRSGKIDVKPL+THRFGFSQKEVEEAFETSARGG AIK
Sbjct: 300 AREVDVLGVFRYMNTWPLCLEFLRSGKIDVKPLITHRFGFSQKEVEEAFETSARGGNAIK 359

Query: 361 VMFNL 365
           VMFNL
Sbjct: 360 VMFNL 364

Source: Glycine max

Species: Glycine max

Genus: Glycine

Family: Fabaceae

Order: Fabales

Phylum: Streptophyta

Superkingdom: Eukaryota

>gi|217072128|gb|ACJ84424.1| unknown [Medicago truncatula] gi|388519843|gb|AFK47983.1| unknown [Medicago truncatula]

 Score =  647 bits (1669), Expect = 0.0,   Method: Compositional matrix adjust.
 Identities = 309/365 (84%), Positives = 339/365 (92%), Gaps = 3/365 (0%)

Query: 1   MGKGGMSQGEKEDGEEVNMAAWLLGVNTLKIQPFELPSLGPYDVLVRMKAVGICGSDVHY 60
           MGKGGMS    +D E+ NMAAWL+G+NTLKIQPF LPSLGP+DV ++MKAVGICGSDVHY
Sbjct: 1   MGKGGMSV--DDDVEQQNMAAWLVGLNTLKIQPFNLPSLGPHDVRIKMKAVGICGSDVHY 58

Query: 61  LKTLRCADFVVKEPMVIGHECAGVIEKVGSEVKTLVPGDRVALEPGISCWRCDHCKGGRY 120
           LKTLRCADF+VKEPMVIGHECAG+I + GS+VKTLVPGDRVA+EPGISCWRCDHCK GRY
Sbjct: 59  LKTLRCADFIVKEPMVIGHECAGIIGEAGSQVKTLVPGDRVAIEPGISCWRCDHCKLGRY 118

Query: 121 NLCPEMKFFATPPVHGSLANQVVHPADLCFKLPDNVSLEEGAMCEPLSVGLHACRRANIG 180
           NLCP+MKFFATPPVHGSLANQ+VHPADLCFKLP+NVSLEEGAMCEPLSVG+HACRRANIG
Sbjct: 119 NLCPDMKFFATPPVHGSLANQIVHPADLCFKLPENVSLEEGAMCEPLSVGVHACRRANIG 178

Query: 181 PETNVLIMGAGPIGLVTMLGAPRAFGAPRIVIVDVDDYRLSVAKEIGADNIVKVSTNLQD 240
           PETNVLIMGAGPIGLVTML A RAFGAPRIV+VDVDD+RLSVAK +GAD+IVKVSTN+QD
Sbjct: 179 PETNVLIMGAGPIGLVTMLSA-RAFGAPRIVVVDVDDHRLSVAKSLGADDIVKVSTNIQD 237

Query: 241 IAEEVEKIQKAMGTGIDVSFDCAGLNKTMSTALGATCAGGKVCLVGMGHHEMTVPLTPAA 300
           +AEEV++I   +G G+DV+FDCAG NKTM+TAL AT  GGKVCLVGMGH EMTVPLTPAA
Sbjct: 238 VAEEVKQIHNVLGAGVDVTFDCAGFNKTMTTALTATQPGGKVCLVGMGHSEMTVPLTPAA 297

Query: 301 VREVDVVGVFRYKNTWPLCLELLRSGKIDVKPLVTHRFGFSQKEVEEAFETSARGGTAIK 360
            REVDVVG+FRYKNTWPLCLE LRSGKIDVKPL+THRFGFSQKEVEEAFETSARGG AIK
Sbjct: 298 AREVDVVGIFRYKNTWPLCLEFLRSGKIDVKPLITHRFGFSQKEVEEAFETSARGGNAIK 357

Query: 361 VMFNL 365
           VMFNL
Sbjct: 358 VMFNL 362

Source: Medicago truncatula

Species: Medicago truncatula

Genus: Medicago

Family: Fabaceae

Order: Fabales

Phylum: Streptophyta

Superkingdom: Eukaryota

>gi|356559880|ref|XP_003548224.1| PREDICTED: L-idonate 5-dehydrogenase-like [Glycine max]

 Score =  647 bits (1669), Expect = 0.0,   Method: Compositional matrix adjust.
 Identities = 310/365 (84%), Positives = 339/365 (92%), Gaps = 1/365 (0%)

Query: 1   MGKGGMSQGEKEDGEEVNMAAWLLGVNTLKIQPFELPSLGPYDVLVRMKAVGICGSDVHY 60
           MGKGGMS  E  +G+E NMAAWL+G+NTLKIQPF+LP+LGP+DV VRMKAVGICGSDVHY
Sbjct: 1   MGKGGMSIDEHGEGKEENMAAWLVGMNTLKIQPFKLPTLGPHDVRVRMKAVGICGSDVHY 60

Query: 61  LKTLRCADFVVKEPMVIGHECAGVIEKVGSEVKTLVPGDRVALEPGISCWRCDHCKGGRY 120
           LKTLRCA F+VKEPMVIGHECAG+IE+VGS+VK+LVPGDRVA+EPGISCW C+HCK GRY
Sbjct: 61  LKTLRCAHFIVKEPMVIGHECAGIIEEVGSQVKSLVPGDRVAIEPGISCWHCNHCKHGRY 120

Query: 121 NLCPEMKFFATPPVHGSLANQVVHPADLCFKLPDNVSLEEGAMCEPLSVGLHACRRANIG 180
           NLC +MKFFATPPVHGSLANQ+VHPADLCFKLPDNVSLEEGAMCEPLSVG+HACRRANIG
Sbjct: 121 NLCDDMKFFATPPVHGSLANQIVHPADLCFKLPDNVSLEEGAMCEPLSVGVHACRRANIG 180

Query: 181 PETNVLIMGAGPIGLVTMLGAPRAFGAPRIVIVDVDDYRLSVAKEIGADNIVKVSTNLQD 240
           PETNVLIMGAGPIGLVTML A RAFGAP+ VIVDVDD+RLSVAK +GAD+I+KVSTN++D
Sbjct: 181 PETNVLIMGAGPIGLVTMLAA-RAFGAPKTVIVDVDDHRLSVAKSLGADDIIKVSTNIKD 239

Query: 241 IAEEVEKIQKAMGTGIDVSFDCAGLNKTMSTALGATCAGGKVCLVGMGHHEMTVPLTPAA 300
           +AEEV +IQK MG GIDV+FDCAG +KTMSTAL AT  GGKVCLVGMGH EMTVPLTPAA
Sbjct: 240 VAEEVVQIQKVMGAGIDVTFDCAGFDKTMSTALSATQPGGKVCLVGMGHSEMTVPLTPAA 299

Query: 301 VREVDVVGVFRYKNTWPLCLELLRSGKIDVKPLVTHRFGFSQKEVEEAFETSARGGTAIK 360
            REVDVVGVFRY NTWPLCLE LRSGKIDVKPL+THRFGFSQKEVEEAFETSARGG AIK
Sbjct: 300 AREVDVVGVFRYMNTWPLCLEFLRSGKIDVKPLITHRFGFSQKEVEEAFETSARGGNAIK 359

Query: 361 VMFNL 365
           VMFNL
Sbjct: 360 VMFNL 364

Source: Glycine max

Species: Glycine max

Genus: Glycine

Family: Fabaceae

Order: Fabales

Phylum: Streptophyta

Superkingdom: Eukaryota

>gi|350538545|ref|NP_001234092.1| sorbitol related enzyme [Solanum lycopersicum] gi|78183416|dbj|BAE47038.1| sorbitol related enzyme [Solanum lycopersicum]

 Score =  644 bits (1660), Expect = 0.0,   Method: Compositional matrix adjust.
 Identities = 310/365 (84%), Positives = 336/365 (92%), Gaps = 10/365 (2%)

Query: 1   MGKGGMSQGEKEDGEEVNMAAWLLGVNTLKIQPFELPSLGPYDVLVRMKAVGICGSDVHY 60
           MGKGG  +         NMAAWLLGVNTLKIQPF LP+LGP+DV VRMKAVGICGSDVHY
Sbjct: 1   MGKGGSDE---------NMAAWLLGVNTLKIQPFNLPALGPHDVRVRMKAVGICGSDVHY 51

Query: 61  LKTLRCADFVVKEPMVIGHECAGVIEKVGSEVKTLVPGDRVALEPGISCWRCDHCKGGRY 120
           LKT+RCADFVVKEPMVIGHECAG+IE+VG EVKTLVPGDRVALEPGISCWRC+ CK GRY
Sbjct: 52  LKTMRCADFVVKEPMVIGHECAGIIEEVGGEVKTLVPGDRVALEPGISCWRCNLCKEGRY 111

Query: 121 NLCPEMKFFATPPVHGSLANQVVHPADLCFKLPDNVSLEEGAMCEPLSVGLHACRRANIG 180
           NLCPEMKFFATPPVHGSLANQVVHPADLCFKLPD++SLEEGAMCEPLSVG+HACRRAN+G
Sbjct: 112 NLCPEMKFFATPPVHGSLANQVVHPADLCFKLPDDISLEEGAMCEPLSVGVHACRRANVG 171

Query: 181 PETNVLIMGAGPIGLVTMLGAPRAFGAPRIVIVDVDDYRLSVAKEIGADNIVKVSTNLQD 240
           PETN+L++GAGPIGLVT+L A RAFGAPRIVIVDVDDYRLSVAK++GAD+IVKVS N+QD
Sbjct: 172 PETNILVLGAGPIGLVTLLAA-RAFGAPRIVIVDVDDYRLSVAKKLGADDIVKVSINIQD 230

Query: 241 IAEEVEKIQKAMGTGIDVSFDCAGLNKTMSTALGATCAGGKVCLVGMGHHEMTVPLTPAA 300
           +A ++E IQKAMG GID SFDCAG NKTMSTALGAT  GGKVCLVGMGHHEMTVPLTPAA
Sbjct: 231 VATDIENIQKAMGGGIDASFDCAGFNKTMSTALGATRPGGKVCLVGMGHHEMTVPLTPAA 290

Query: 301 VREVDVVGVFRYKNTWPLCLELLRSGKIDVKPLVTHRFGFSQKEVEEAFETSARGGTAIK 360
            REVDV+G+FRYKNTWPLCLE LRSGKIDVKPL+THRFGFSQ+EVEEAFETSARGG AIK
Sbjct: 291 AREVDVIGIFRYKNTWPLCLEFLRSGKIDVKPLITHRFGFSQEEVEEAFETSARGGDAIK 350

Query: 361 VMFNL 365
           VMFNL
Sbjct: 351 VMFNL 355

Source: Solanum lycopersicum

Species: Solanum lycopersicum

Genus: Solanum

Family: Solanaceae

Order: Solanales

Phylum: Streptophyta

Superkingdom: Eukaryota

>gi|225469310|ref|XP_002269895.1| PREDICTED: L-idonate 5-dehydrogenase [Vitis vinifera] gi|297741125|emb|CBI31856.3| unnamed protein product [Vitis vinifera]

 Score =  637 bits (1643), Expect = e-180,   Method: Compositional matrix adjust.
 Identities = 313/366 (85%), Positives = 336/366 (91%), Gaps = 2/366 (0%)

Query: 1   MGKGGMSQGEKEDGEEV-NMAAWLLGVNTLKIQPFELPSLGPYDVLVRMKAVGICGSDVH 59
           MGKGGMSQG    GE   NMAAWLLGVN LKIQPF LP LGP+DV VRMKAVGICGSDVH
Sbjct: 1   MGKGGMSQGGDGRGEGEENMAAWLLGVNNLKIQPFILPPLGPHDVRVRMKAVGICGSDVH 60

Query: 60  YLKTLRCADFVVKEPMVIGHECAGVIEKVGSEVKTLVPGDRVALEPGISCWRCDHCKGGR 119
           YLK LRCADF+VKEPMVIGHECAG+I++VG +VK+LVPGDRVALEPGISCWRC  CK GR
Sbjct: 61  YLKKLRCADFIVKEPMVIGHECAGIIDEVGPQVKSLVPGDRVALEPGISCWRCQLCKEGR 120

Query: 120 YNLCPEMKFFATPPVHGSLANQVVHPADLCFKLPDNVSLEEGAMCEPLSVGLHACRRANI 179
           YNLCPEMKFFATPPVHGSLANQVVHPADLCFKLPDNVSLEEGAMCEPLSVG+HACRRA+I
Sbjct: 121 YNLCPEMKFFATPPVHGSLANQVVHPADLCFKLPDNVSLEEGAMCEPLSVGVHACRRADI 180

Query: 180 GPETNVLIMGAGPIGLVTMLGAPRAFGAPRIVIVDVDDYRLSVAKEIGADNIVKVSTNLQ 239
           GPE+NVL+MGAGPIGLVTML A RAFGAPRIVIVDVDDYRLSVAK++GAD IVKVSTN+Q
Sbjct: 181 GPESNVLVMGAGPIGLVTMLAA-RAFGAPRIVIVDVDDYRLSVAKDLGADEIVKVSTNIQ 239

Query: 240 DIAEEVEKIQKAMGTGIDVSFDCAGLNKTMSTALGATCAGGKVCLVGMGHHEMTVPLTPA 299
           D+AEEV +I KAMG  +DVSFDCAG +KTMSTAL AT  GGKVCLVGMGH+EMTVPLTPA
Sbjct: 240 DVAEEVVQIHKAMGARVDVSFDCAGFDKTMSTALSATSTGGKVCLVGMGHNEMTVPLTPA 299

Query: 300 AVREVDVVGVFRYKNTWPLCLELLRSGKIDVKPLVTHRFGFSQKEVEEAFETSARGGTAI 359
           A REVDVVGVFRYKNTWP+C+E LRS KIDVKPL+THRFGFSQ+EVEEAFETSARGGTAI
Sbjct: 300 AAREVDVVGVFRYKNTWPICIEFLRSVKIDVKPLITHRFGFSQREVEEAFETSARGGTAI 359

Query: 360 KVMFNL 365
           KVMFNL
Sbjct: 360 KVMFNL 365

Source: Vitis vinifera

Species: Vitis vinifera

Genus: Vitis

Family: Vitaceae

Order: Vitales

Phylum: Streptophyta

Superkingdom: Eukaryota

>gi|15242240|ref|NP_200010.1| L-iditol 2-dehydrogenase [Arabidopsis thaliana] gi|42573658|ref|NP_974925.1| L-iditol 2-dehydrogenase [Arabidopsis thaliana] gi|13877797|gb|AAK43976.1|AF370161_1 putative sorbitol dehydrogenase [Arabidopsis thaliana] gi|10177732|dbj|BAB11045.1| sorbitol dehydrogenase-like protein [Arabidopsis thaliana] gi|22136876|gb|AAM91782.1| putative sorbitol dehydrogenase [Arabidopsis thaliana] gi|110741231|dbj|BAF02166.1| sorbitol dehydrogenase-like protein [Arabidopsis thaliana] gi|332008769|gb|AED96152.1| L-iditol 2-dehydrogenase [Arabidopsis thaliana] gi|332008770|gb|AED96153.1| L-iditol 2-dehydrogenase [Arabidopsis thaliana]

 Score =  633 bits (1632), Expect = e-179,   Method: Compositional matrix adjust.
 Identities = 306/365 (83%), Positives = 332/365 (90%), Gaps = 1/365 (0%)

Query: 1   MGKGGMSQGEKEDGEEVNMAAWLLGVNTLKIQPFELPSLGPYDVLVRMKAVGICGSDVHY 60
           MGKGGMSQGE    EE NMAAWL+G+NTLKIQPF LPS+GP+DV VRMKAVGICGSDVHY
Sbjct: 1   MGKGGMSQGEGSKVEEENMAAWLVGINTLKIQPFLLPSVGPHDVRVRMKAVGICGSDVHY 60

Query: 61  LKTLRCADFVVKEPMVIGHECAGVIEKVGSEVKTLVPGDRVALEPGISCWRCDHCKGGRY 120
           LKT+RCADFVVKEPMVIGHECAG+IE+VG EVK LV GDRVALEPGISCWRC+ C+ GRY
Sbjct: 61  LKTMRCADFVVKEPMVIGHECAGIIEEVGEEVKHLVVGDRVALEPGISCWRCNLCREGRY 120

Query: 121 NLCPEMKFFATPPVHGSLANQVVHPADLCFKLPDNVSLEEGAMCEPLSVGLHACRRANIG 180
           NLCPEMKFFATPPVHGSLANQVVHPADLCFKLP+NVSLEEGAMCEPLSVG+HACRRA +G
Sbjct: 121 NLCPEMKFFATPPVHGSLANQVVHPADLCFKLPENVSLEEGAMCEPLSVGVHACRRAEVG 180

Query: 181 PETNVLIMGAGPIGLVTMLGAPRAFGAPRIVIVDVDDYRLSVAKEIGADNIVKVSTNLQD 240
           PETNVL+MGAGPIGLVTML A RAF  PRIVIVDVD+ RL+VAK++GAD IV+V+TNL+D
Sbjct: 181 PETNVLVMGAGPIGLVTMLAA-RAFSVPRIVIVDVDENRLAVAKQLGADEIVQVTTNLED 239

Query: 241 IAEEVEKIQKAMGTGIDVSFDCAGLNKTMSTALGATCAGGKVCLVGMGHHEMTVPLTPAA 300
           +  EVE+IQKAMG+ IDV+FDCAG NKTMSTAL AT  GGKVCLVGMGH  MTVPLTPAA
Sbjct: 240 VGSEVEQIQKAMGSNIDVTFDCAGFNKTMSTALAATRCGGKVCLVGMGHGIMTVPLTPAA 299

Query: 301 VREVDVVGVFRYKNTWPLCLELLRSGKIDVKPLVTHRFGFSQKEVEEAFETSARGGTAIK 360
            REVDVVGVFRYKNTWPLCLE L SGKIDVKPL+THRFGFSQKEVE+AFETSARG  AIK
Sbjct: 300 AREVDVVGVFRYKNTWPLCLEFLTSGKIDVKPLITHRFGFSQKEVEDAFETSARGSNAIK 359

Query: 361 VMFNL 365
           VMFNL
Sbjct: 360 VMFNL 364

Source: Arabidopsis thaliana

Species: Arabidopsis thaliana

Genus: Arabidopsis

Family: Brassicaceae

Order: Brassicales

Phylum: Streptophyta

Superkingdom: Eukaryota

>gi|21553353|gb|AAM62446.1| sorbitol dehydrogenase-like protein [Arabidopsis thaliana]

 Score =  632 bits (1630), Expect = e-179,   Method: Compositional matrix adjust.
 Identities = 305/365 (83%), Positives = 332/365 (90%), Gaps = 1/365 (0%)

Query: 1   MGKGGMSQGEKEDGEEVNMAAWLLGVNTLKIQPFELPSLGPYDVLVRMKAVGICGSDVHY 60
           MGKGGMSQGE    EE NMAAWL+G+NTLKIQPF LPS+GP+DV VRMKAVGICGSDVHY
Sbjct: 1   MGKGGMSQGEGSKVEEENMAAWLVGINTLKIQPFLLPSVGPHDVRVRMKAVGICGSDVHY 60

Query: 61  LKTLRCADFVVKEPMVIGHECAGVIEKVGSEVKTLVPGDRVALEPGISCWRCDHCKGGRY 120
           LKT+RCADFVVKEPMVIGHECAG+IE+VG EVK LV GDRVALEPGISCWRC+ C+ GRY
Sbjct: 61  LKTMRCADFVVKEPMVIGHECAGIIEEVGEEVKHLVVGDRVALEPGISCWRCNLCREGRY 120

Query: 121 NLCPEMKFFATPPVHGSLANQVVHPADLCFKLPDNVSLEEGAMCEPLSVGLHACRRANIG 180
           NLCPEMKFFATPPVHGSLANQVVHPADLCFKLP+NVSLEEGAMCEPLSVG+HACRRA +G
Sbjct: 121 NLCPEMKFFATPPVHGSLANQVVHPADLCFKLPENVSLEEGAMCEPLSVGVHACRRAEVG 180

Query: 181 PETNVLIMGAGPIGLVTMLGAPRAFGAPRIVIVDVDDYRLSVAKEIGADNIVKVSTNLQD 240
           PETNVL+MGAGPIGLVTML A +AF  PRIVIVDVD+ RL+VAK++GAD IV+V+TNL+D
Sbjct: 181 PETNVLVMGAGPIGLVTMLAA-QAFSVPRIVIVDVDENRLAVAKQLGADEIVQVTTNLED 239

Query: 241 IAEEVEKIQKAMGTGIDVSFDCAGLNKTMSTALGATCAGGKVCLVGMGHHEMTVPLTPAA 300
           +  EVE+IQKAMG+ IDV+FDCAG NKTMSTAL AT  GGKVCLVGMGH  MTVPLTPAA
Sbjct: 240 VGSEVEQIQKAMGSNIDVTFDCAGFNKTMSTALAATRCGGKVCLVGMGHGIMTVPLTPAA 299

Query: 301 VREVDVVGVFRYKNTWPLCLELLRSGKIDVKPLVTHRFGFSQKEVEEAFETSARGGTAIK 360
            REVDVVGVFRYKNTWPLCLE L SGKIDVKPL+THRFGFSQKEVE+AFETSARG  AIK
Sbjct: 300 AREVDVVGVFRYKNTWPLCLEFLTSGKIDVKPLITHRFGFSQKEVEDAFETSARGSNAIK 359

Query: 361 VMFNL 365
           VMFNL
Sbjct: 360 VMFNL 364

Source: Arabidopsis thaliana

Species: Arabidopsis thaliana

Genus: Arabidopsis

Family: Brassicaceae

Order: Brassicales

Phylum: Streptophyta

Superkingdom: Eukaryota

---

Prediction of Gene Ontology (GO) Terms

Close Homologs with Gene Ontology terms Detected by BLAST

Original result of BLAST against Gene Ontology (AMIGO)

ID	Length	Definition	Q cover	H cover	Identity	E-value
Query	365
TAIR|locus:2173093	364	AT5G51970 [Arabidopsis thalian	0.997	1.0	0.838	6e-167
FB|FBgn0022359	360	Sodh-2 "Sorbitol dehydrogenase	0.942	0.955	0.515	3.2e-88
FB|FBgn0024289	360	Sodh-1 "Sorbitol dehydrogenase	0.942	0.955	0.510	1.8e-87
WB|WBGene00011003	347	R04B5.5 [Caenorhabditis elegan	0.926	0.974	0.478	2.4e-85
RGD|3734	357	Sord "sorbitol dehydrogenase"	0.926	0.946	0.497	6.2e-85
MGI|MGI:98266	357	Sord "sorbitol dehydrogenase"	0.926	0.946	0.491	1.3e-84
UNIPROTKB|Q58D31	356	SORD "Sorbitol dehydrogenase"	0.926	0.949	0.497	5.6e-84
UNIPROTKB|F1PXG0	356	SORD "Uncharacterized protein"	0.926	0.949	0.5	1.2e-83
UNIPROTKB|Q00796	357	SORD "Sorbitol dehydrogenase"	0.926	0.946	0.494	3.1e-83
UNIPROTKB|Q5R5F3	357	SORD "Sorbitol dehydrogenase"	0.926	0.946	0.491	3.1e-83

TAIR|locus:2173093 AT5G51970 [Arabidopsis thaliana (taxid:3702)]

 Score = 1624 (576.7 bits), Expect = 6.0e-167, P = 6.0e-167
 Identities = 306/365 (83%), Positives = 332/365 (90%)

Query:     1 MGKGGMSQGEKEDGEEVNMAAWLLGVNTLKIQPFELPSLGPYDVLVRMKAVGICGSDVHY 60
             MGKGGMSQGE    EE NMAAWL+G+NTLKIQPF LPS+GP+DV VRMKAVGICGSDVHY
Sbjct:     1 MGKGGMSQGEGSKVEEENMAAWLVGINTLKIQPFLLPSVGPHDVRVRMKAVGICGSDVHY 60

Query:    61 LKTLRCADFVVKEPMVIGHECAGVIEKVGSEVKTLVPGDRVALEPGISCWRCDHCKGGRY 120
             LKT+RCADFVVKEPMVIGHECAG+IE+VG EVK LV GDRVALEPGISCWRC+ C+ GRY
Sbjct:    61 LKTMRCADFVVKEPMVIGHECAGIIEEVGEEVKHLVVGDRVALEPGISCWRCNLCREGRY 120

Query:   121 NLCPEMKFFATPPVHGSLANQVVHPADLCFKLPDNVSLEEGAMCEPLSVGLHACRRANIG 180
             NLCPEMKFFATPPVHGSLANQVVHPADLCFKLP+NVSLEEGAMCEPLSVG+HACRRA +G
Sbjct:   121 NLCPEMKFFATPPVHGSLANQVVHPADLCFKLPENVSLEEGAMCEPLSVGVHACRRAEVG 180

Query:   181 PETNVLIMGAGPIGLVTMLGAPRAFGAPRIVIVDVDDYRLSVAKEIGADNIVKVSTNLQD 240
             PETNVL+MGAGPIGLVTML A RAF  PRIVIVDVD+ RL+VAK++GAD IV+V+TNL+D
Sbjct:   181 PETNVLVMGAGPIGLVTMLAA-RAFSVPRIVIVDVDENRLAVAKQLGADEIVQVTTNLED 239

Query:   241 IAEEVEKIQKAMGTGIDVSFDCAGLNKTMSTALGATCAGGKVCLVGMGHHEMTVPLTPAA 300
             +  EVE+IQKAMG+ IDV+FDCAG NKTMSTAL AT  GGKVCLVGMGH  MTVPLTPAA
Sbjct:   240 VGSEVEQIQKAMGSNIDVTFDCAGFNKTMSTALAATRCGGKVCLVGMGHGIMTVPLTPAA 299

Query:   301 VREVDVVGVFRYKNTWPLCLELLRSGKIDVKPLVTHRFGFSQKEVEEAFETSARGGTAIK 360
              REVDVVGVFRYKNTWPLCLE L SGKIDVKPL+THRFGFSQKEVE+AFETSARG  AIK
Sbjct:   300 AREVDVVGVFRYKNTWPLCLEFLTSGKIDVKPLITHRFGFSQKEVEDAFETSARGSNAIK 359

Query:   361 VMFNL 365
             VMFNL
Sbjct:   360 VMFNL 364

GO:0000166 "nucleotide binding" evidence=IEA

GO:0005737 "cytoplasm" evidence=ISM

GO:0008270 "zinc ion binding" evidence=IEA

GO:0016491 "oxidoreductase activity" evidence=IEA

GO:0055114 "oxidation-reduction process" evidence=IEA

GO:0005829 "cytosol" evidence=IDA

GO:0009506 "plasmodesma" evidence=IDA

FB|FBgn0022359 Sodh-2 "Sorbitol dehydrogenase-2" [Drosophila melanogaster (taxid:7227)]

 Score = 881 (315.2 bits), Expect = 3.2e-88, P = 3.2e-88
 Identities = 180/349 (51%), Positives = 235/349 (67%)

Query:    18 NMAAWLLGVNTLKIQPFELPSLGPYDVLVRMKAVGICGSDVHYLKTLRCADFVVKEPMVI 77
             N+ A L G+  L+++   +P +   +VL+ M +VGICGSDVHYL   R  DFV+ +PM+I
Sbjct:     5 NLTAVLHGIEDLRLEQRPIPEIADDEVLLAMDSVGICGSDVHYLAHGRIGDFVLTKPMII 64

Query:    78 GHECAGVIEKVGSEVKTLVPGDRVALEPGISCWRCDHCKGGRYNLCPEMKFFATPPVHGS 137
             GHE AGV+ K+G +V TL  GDRVA+EPG+ C  CDHCK GRYNLC +M F ATPP  G+
Sbjct:    65 GHEAAGVVAKLGKKVTTLKVGDRVAIEPGVPCRYCDHCKQGRYNLCADMVFCATPPYDGN 124

Query:   138 LANQVVHPADLCFKLPDNVSLEEGAMCEPLSVGLHACRRANIGPETNVLIMGAGPIGLVT 197
             L     H AD CFKLPD+VS+EEGA+ EPLSVG+HACRRA +G  + VLI+GAGPIGLVT
Sbjct:   125 LTRYYKHAADFCFKLPDHVSMEEGALLEPLSVGVHACRRAGVGLGSKVLILGAGPIGLVT 184

Query:   198 MLGAPRAFGAPRIVIVDVDDYRLSVAKEIGADNIVKVSTNLQDIAEEVEKIQKAMGTGID 257
             +L A +A GA  I+I D+   RL VAKE+GA + + +  + Q   E V+ + + M    D
Sbjct:   185 LLAA-QAMGASEILITDLVQQRLDVAKELGATHTLLLQRD-QSAEETVKVVHQTMSEVPD 242

Query:   258 VSFDCAGLNKTMSTALGATCAGGKVCLVGMGHHEMTVPLTPAAVREVDVVGVFRYKNTWP 317
              S DC G   +   A+ AT +GG V +VGMG  E+ +PL  A  RE+D+ GVFRY N + 
Sbjct:   243 KSIDCCGAESSARLAIFATRSGGVVVVVGMGAPEVKLPLINALAREIDIRGVFRYCNDYS 302

Query:   318 LCLELLRSGKIDVKPLVTHRFGFSQKEVEEAFETSARG-GTAIKVMFNL 365
               L L+ SGK++VK LVTH +  +  E  EAFETS RG G AIKVM ++
Sbjct:   303 AALALVASGKVNVKRLVTHHYDIT--ETAEAFETSRRGTGGAIKVMIHV 349

GO:0003939 "L-iditol 2-dehydrogenase activity" evidence=ISS;TAS

GO:0055114 "oxidation-reduction process" evidence=IEA

GO:0000166 "nucleotide binding" evidence=IEA

GO:0008270 "zinc ion binding" evidence=IEA

FB|FBgn0024289 Sodh-1 "Sorbitol dehydrogenase 1" [Drosophila melanogaster (taxid:7227)]

 Score = 874 (312.7 bits), Expect = 1.8e-87, P = 1.8e-87
 Identities = 178/349 (51%), Positives = 235/349 (67%)

Query:    18 NMAAWLLGVNTLKIQPFELPSLGPYDVLVRMKAVGICGSDVHYLKTLRCADFVVKEPMVI 77
             N+ A L G+  ++++   +P +   +VL+ M +VGICGSDVHYL   R  DFV+ +PM+I
Sbjct:     5 NLTAVLHGIEDMRLEQRPIPEIADDEVLLAMDSVGICGSDVHYLAHGRIGDFVLTKPMII 64

Query:    78 GHECAGVIEKVGSEVKTLVPGDRVALEPGISCWRCDHCKGGRYNLCPEMKFFATPPVHGS 137
             GHE AGV+ K+G +V TL  GDRVA+EPG+ C +CDHCK G+YNLCP M F ATPP  G+
Sbjct:    65 GHESAGVVAKLGKKVTTLKVGDRVAIEPGVPCRKCDHCKQGKYNLCPGMVFCATPPYDGN 124

Query:   138 LANQVVHPADLCFKLPDNVSLEEGAMCEPLSVGLHACRRANIGPETNVLIMGAGPIGLVT 197
             L     H AD CFKLPD+V++EEGA+ EPLSVG+HAC+RA +   + VLI+GAGPIGLVT
Sbjct:   125 LTRYYKHAADFCFKLPDHVTMEEGALLEPLSVGVHACKRAEVTLGSKVLILGAGPIGLVT 184

Query:   198 MLGAPRAFGAPRIVIVDVDDYRLSVAKEIGADNIVKVSTNLQDIAEEVEKIQKAMGTGID 257
             ++ A +A GA  I+I D+   RL VAKE+GA + + +  + Q   E    +QK MG   D
Sbjct:   185 LMAA-QAMGASEILITDLVQQRLDVAKELGATHTLLLKRD-QTAEETAVLVQKTMGGQPD 242

Query:   258 VSFDCAGLNKTMSTALGATCAGGKVCLVGMGHHEMTVPLTPAAVREVDVVGVFRYKNTWP 317
              S DC G   +   A+ AT +GG V +VGMG  E+ +PL  A  REVD+ GVFRY N + 
Sbjct:   243 KSIDCCGAESSARLAIFATRSGGIVVVVGMGAAEIKLPLINALAREVDIRGVFRYCNDYA 302

Query:   318 LCLELLRSGKIDVKPLVTHRFGFSQKEVEEAFETSARG-GTAIKVMFNL 365
               L L+ SGK++VK LVTH F    KE  +AFETS +G G AIKVM ++
Sbjct:   303 AALALVASGKVNVKRLVTHHFDI--KETAKAFETSRKGLGGAIKVMIHV 349

GO:0003939 "L-iditol 2-dehydrogenase activity" evidence=NAS

GO:0000166 "nucleotide binding" evidence=IEA

GO:0055114 "oxidation-reduction process" evidence=IEA

GO:0008270 "zinc ion binding" evidence=IEA

GO:0016491 "oxidoreductase activity" evidence=IEA

WB|WBGene00011003 R04B5.5 [Caenorhabditis elegans (taxid:6239)]

 Score = 854 (305.7 bits), Expect = 2.4e-85, P = 2.4e-85
 Identities = 165/345 (47%), Positives = 236/345 (68%)

Query:    18 NMAAWLLGVNTLKIQPFELPSLGPYDVLVRMKAVGICGSDVHYLKTLRCADFVVKEPMVI 77
             N++A L GV+ L+++   +P  GP  VLV++  VGICGSDVHY        FVVKEPM++
Sbjct:     5 NLSAVLYGVDDLRLEQVPIPKPGPNQVLVKVHTVGICGSDVHYWTHGAIGPFVVKEPMIV 64

Query:    78 GHECAGVIEKVGSEVKTLVPGDRVALEPGISCWRCDHCKGGRYNLCPEMKFFATPPVHGS 137
             GHE +G++ +VG+EVK L  GDR+A+EPG+ C  C+HCK GRYNLCPEM+FFATPPVHG+
Sbjct:    65 GHETSGIVSEVGNEVKHLKVGDRIAMEPGLPCKLCEHCKTGRYNLCPEMRFFATPPVHGT 124

Query:   138 LANQVVHPADLCFKLPDNVSLEEGAMCEPLSVGLHACRRANIGPETNVLIMGAGPIGLVT 197
             L+  VVH AD CFKLPDN+S E+GA+ EPLSV +HACRR N+     VL++GAGPIG++ 
Sbjct:   125 LSRFVVHDADFCFKLPDNLSFEDGALIEPLSVAIHACRRGNVQMGHRVLVLGAGPIGVLN 184

Query:   198 MLGAPRAFGAPRIVIVDVDDYRLSVAKEIGADNIVKVSTNLQDIAEEVEKIQKAMGTGI- 256
             ++ A +A GA ++VI D+DD RL++AK++GAD  + V     D  +   +I  A+G    
Sbjct:   185 LITA-KAVGAGKVVITDLDDGRLALAKKLGADATINVKGKSLDAVKS--EIITALGDQQP 241

Query:   257 DVSFDCAGLNKTMSTALGATCAGGKVCLVGMGHHEMTVPLTPAAVREVDVVGVFRYKNTW 316
             DV  +C G   ++ TA+  T +GG + LVG+G   + +P+  +A REVD+ G+FRY N +
Sbjct:   242 DVCIECTGAQPSIETAITTTKSGGVIVLVGLGADRVEIPIIESATREVDMRGIFRYVNCY 301

Query:   317 PLCLELLRSGKIDVKPLVTHRFGFSQKEVEEAFETSARGGTAIKV 361
             P  +EL+ SGK+++  L   R  +  +E +EAF+ + +    IKV
Sbjct:   302 PTAIELISSGKLNLSGLT--RAHYKLEETQEAFKRTQKADV-IKV 343

GO:0008270 "zinc ion binding" evidence=IEA

GO:0016491 "oxidoreductase activity" evidence=IEA

GO:0055114 "oxidation-reduction process" evidence=IEA

GO:0016747 "transferase activity, transferring acyl groups other than amino-acyl groups" evidence=IEA

RGD|3734 Sord "sorbitol dehydrogenase" [Rattus norvegicus (taxid:10116)]

 Score = 850 (304.3 bits), Expect = 6.2e-85, P = 6.2e-85
 Identities = 172/346 (49%), Positives = 240/346 (69%)

Query:    18 NMAAWLLGVNTLKIQPFELPSLGPYDVLVRMKAVGICGSDVHYLKTLRCADFVVKEPMVI 77
             N++  + G   ++++ + +P LGP DVL++M +VGICGSDVHY +  R  DFVVK+PMV+
Sbjct:     9 NLSLVVHGPGDIRLENYPIPELGPNDVLLKMHSVGICGSDVHYWEHGRIGDFVVKKPMVL 68

Query:    78 GHECAGVIEKVGSEVKTLVPGDRVALEPGISCWRCDHCKGGRYNLCPEMKFFATPPVHGS 137
             GHE AG + KVG  VK L PGDRVA+EPG+     + CK GRYNL P + F ATPP  G+
Sbjct:    69 GHEAAGTVTKVGPMVKHLKPGDRVAIEPGVPREIDEFCKIGRYNLTPSIFFCATPPDDGN 128

Query:   138 LANQVVHPADLCFKLPDNVSLEEGAMCEPLSVGLHACRRANIGPETNVLIMGAGPIGLVT 197
             L     H AD C+KLPD+V+ EEGA+ EPLSVG++ACRR ++     VL+ GAGPIG+VT
Sbjct:   129 LCRFYKHSADFCYKLPDSVTFEEGALIEPLSVGIYACRRGSVSLGNKVLVCGAGPIGIVT 188

Query:   198 MLGAPRAFGAPRIVIVDVDDYRLSVAKEIGADNIVKVSTNL-QDIAEEVEKIQKAMGTGI 256
             +L A +A GA ++V++D+   RL+ AKE+GAD  ++V+     DIA++VE +   +G+  
Sbjct:   189 LLVA-KAMGASQVVVIDLSASRLAKAKEVGADFTIQVAKETPHDIAKKVESV---LGSKP 244

Query:   257 DVSFDCAGLNKTMSTALGATCAGGKVCLVGMGHHEMTVPLTPAAVREVDVVGVFRYKNTW 316
             +V+ +C G   ++ T + AT +GG + +VGMG   + +PL  AAVREVD+ GVFRY NTW
Sbjct:   245 EVTIECTGAESSVQTGIYATHSGGTLVVVGMGPEMINLPLVHAAVREVDIKGVFRYCNTW 304

Query:   317 PLCLELLRSGKIDVKPLVTHRFGFSQKEVEEAFETSARGGTAIKVM 362
             P+ + +L S  ++VKPLVTHRF   +K VE AFET A+ G  +KVM
Sbjct:   305 PMAVSMLASKTLNVKPLVTHRFPL-EKAVE-AFET-AKKGLGLKVM 347

GO:0000166 "nucleotide binding" evidence=IEA

GO:0003939 "L-iditol 2-dehydrogenase activity" evidence=IEA;ISO

GO:0005575 "cellular_component" evidence=ND

GO:0005739 "mitochondrion" evidence=ISO

GO:0006060 "sorbitol metabolic process" evidence=ISO

GO:0006062 "sorbitol catabolic process" evidence=ISO

GO:0006970 "response to osmotic stress" evidence=IEP

GO:0008270 "zinc ion binding" evidence=ISO;IDA

GO:0009725 "response to hormone stimulus" evidence=IDA

GO:0016020 "membrane" evidence=ISO

GO:0030317 "sperm motility" evidence=ISO;ISS

GO:0031514 "motile cilium" evidence=ISS

GO:0031667 "response to nutrient levels" evidence=IEP

GO:0031966 "mitochondrial membrane" evidence=IEA

GO:0042493 "response to drug" evidence=IEP

GO:0042802 "identical protein binding" evidence=IDA

GO:0046370 "fructose biosynthetic process" evidence=ISO

GO:0046686 "response to cadmium ion" evidence=IDA

GO:0046688 "response to copper ion" evidence=IDA

GO:0051160 "L-xylitol catabolic process" evidence=ISO

GO:0051164 "L-xylitol metabolic process" evidence=ISO

GO:0051287 "NAD binding" evidence=ISO

GO:0055114 "oxidation-reduction process" evidence=ISO

MGI|MGI:98266 Sord "sorbitol dehydrogenase" [Mus musculus (taxid:10090)]

 Score = 847 (303.2 bits), Expect = 1.3e-84, P = 1.3e-84
 Identities = 170/346 (49%), Positives = 239/346 (69%)

Query:    18 NMAAWLLGVNTLKIQPFELPSLGPYDVLVRMKAVGICGSDVHYLKTLRCADFVVKEPMVI 77
             N++  + G   ++++ + +P LGP DVL++M +VGICGSDVHY +  R  DFVVK+PMV+
Sbjct:     9 NLSLVVHGPGDIRLENYPIPELGPNDVLLKMHSVGICGSDVHYWEHGRIGDFVVKKPMVL 68

Query:    78 GHECAGVIEKVGSEVKTLVPGDRVALEPGISCWRCDHCKGGRYNLCPEMKFFATPPVHGS 137
             GHE AG + KVG  VK L PGDRVA+EPG+     ++CK GRYNL P + F ATPP  G+
Sbjct:    69 GHEAAGTVTKVGELVKHLKPGDRVAIEPGVPREVDEYCKIGRYNLTPTIFFCATPPDDGN 128

Query:   138 LANQVVHPADLCFKLPDNVSLEEGAMCEPLSVGLHACRRANIGPETNVLIMGAGPIGLVT 197
             L     H AD C+KLPD+V+ EEGA+ EPLSVG++ACRR ++     VL+ GAGP+G+VT
Sbjct:   129 LCRFYKHNADFCYKLPDSVTFEEGALIEPLSVGIYACRRGSVSLGNKVLVCGAGPVGMVT 188

Query:   198 MLGAPRAFGAPRIVIVDVDDYRLSVAKEIGADNIVKVSTNL-QDIAEEVEKIQKAMGTGI 256
             +L A +A GA ++V+ D+   RL+ AKE+GAD  ++V     Q+IA +VE +   +G+  
Sbjct:   189 LLVA-KAMGAAQVVVTDLSASRLTKAKEVGADFTIQVGKETPQEIASKVESL---LGSKP 244

Query:   257 DVSFDCAGLNKTMSTALGATCAGGKVCLVGMGHHEMTVPLTPAAVREVDVVGVFRYKNTW 316
             +V+ +C G   ++ T + AT +GG + +VGMG   + +PL  AA+REVD+ GVFRY NTW
Sbjct:   245 EVTIECTGAESSVQTGIYATHSGGTLVIVGMGAEMVNLPLVHAAIREVDIKGVFRYCNTW 304

Query:   317 PLCLELLRSGKIDVKPLVTHRFGFSQKEVEEAFETSARGGTAIKVM 362
             P+ + +L S  ++VKPLVTHRF   +K VE AFET A+ G  +KVM
Sbjct:   305 PMAISMLASKTLNVKPLVTHRFPL-EKAVE-AFET-AKKGVGLKVM 347

GO:0000166 "nucleotide binding" evidence=IEA

GO:0003939 "L-iditol 2-dehydrogenase activity" evidence=ISO;IDA

GO:0005739 "mitochondrion" evidence=IDA

GO:0005929 "cilium" evidence=IEA

GO:0006060 "sorbitol metabolic process" evidence=IDA

GO:0006062 "sorbitol catabolic process" evidence=ISO

GO:0008270 "zinc ion binding" evidence=ISO

GO:0009725 "response to hormone stimulus" evidence=ISO

GO:0016020 "membrane" evidence=ISO

GO:0016491 "oxidoreductase activity" evidence=IEA

GO:0030317 "sperm motility" evidence=IDA

GO:0042802 "identical protein binding" evidence=ISO

GO:0042995 "cell projection" evidence=IEA

GO:0046370 "fructose biosynthetic process" evidence=ISO

GO:0046686 "response to cadmium ion" evidence=ISO

GO:0046688 "response to copper ion" evidence=ISO

GO:0046872 "metal ion binding" evidence=IEA

GO:0051160 "L-xylitol catabolic process" evidence=ISO

GO:0051164 "L-xylitol metabolic process" evidence=ISO

GO:0051287 "NAD binding" evidence=ISO

GO:0055114 "oxidation-reduction process" evidence=ISO;IDA

UNIPROTKB|Q58D31 SORD "Sorbitol dehydrogenase" [Bos taurus (taxid:9913)]

 Score = 841 (301.1 bits), Expect = 5.6e-84, P = 5.6e-84
 Identities = 172/346 (49%), Positives = 239/346 (69%)

Query:    18 NMAAWLLGVNTLKIQPFELPSLGPYDVLVRMKAVGICGSDVHYLKTLRCADFVVKEPMVI 77
             N++  + G   L+++ + +P  GP +VL++M +VGICGSDVHY +  R  DFVVK+PMV+
Sbjct:     8 NLSLVVHGPGDLRLENYPIPEPGPNEVLLKMHSVGICGSDVHYWQHGRIGDFVVKKPMVL 67

Query:    78 GHECAGVIEKVGSEVKTLVPGDRVALEPGISCWRCDHCKGGRYNLCPEMKFFATPPVHGS 137
             GHE +G + KVGS V+ L PGDRVA+EPG      + CK GRYNL P + F ATPP  G+
Sbjct:    68 GHEASGTVVKVGSLVRHLQPGDRVAIEPGAPRETDEFCKIGRYNLSPTIFFCATPPDDGN 127

Query:   138 LANQVVHPADLCFKLPDNVSLEEGAMCEPLSVGLHACRRANIGPETNVLIMGAGPIGLVT 197
             L     H A+ C+KLPDNV+ EEGA+ EPLSVG+HACRRA +     VL+ GAGPIGLV+
Sbjct:   128 LCRFYKHNANFCYKLPDNVTFEEGALIEPLSVGIHACRRAGVTLGNKVLVCGAGPIGLVS 187

Query:   198 MLGAPRAFGAPRIVIVDVDDYRLSVAKEIGADNIVKVSTNL-QDIAEEVEKIQKAMGTGI 256
             +L A +A GA ++V+ D+   RLS AKE+GAD I+++S    Q+IA++VE +   +G+  
Sbjct:   188 LLAA-KAMGAAQVVVTDLSASRLSKAKEVGADFILQISNESPQEIAKKVEGL---LGSKP 243

Query:   257 DVSFDCAGLNKTMSTALGATCAGGKVCLVGMGHHEMTVPLTPAAVREVDVVGVFRYKNTW 316
             +V+ +C G+  ++   + AT +GG + LVG+G    +VPL  AA REVD+ GVFRY NTW
Sbjct:   244 EVTIECTGVETSIQAGIYATHSGGTLVLVGLGSEMTSVPLVHAATREVDIKGVFRYCNTW 303

Query:   317 PLCLELLRSGKIDVKPLVTHRFGFSQKEVEEAFETSARGGTAIKVM 362
             P+ + +L S  ++VKPLVTHRF   +K +E AFETS +G   +KVM
Sbjct:   304 PMAISMLASKSVNVKPLVTHRFPL-EKALE-AFETSKKG-LGLKVM 346

GO:0030317 "sperm motility" evidence=ISS

GO:0031514 "motile cilium" evidence=ISS

GO:0031966 "mitochondrial membrane" evidence=IEA

GO:0051287 "NAD binding" evidence=IEA

GO:0051160 "L-xylitol catabolic process" evidence=IEA

GO:0046370 "fructose biosynthetic process" evidence=IEA

GO:0006062 "sorbitol catabolic process" evidence=IEA

GO:0003939 "L-iditol 2-dehydrogenase activity" evidence=IEA

GO:0008270 "zinc ion binding" evidence=IEA

UNIPROTKB|F1PXG0 SORD "Uncharacterized protein" [Canis lupus familiaris (taxid:9615)]

 Score = 838 (300.0 bits), Expect = 1.2e-83, P = 1.2e-83
 Identities = 173/346 (50%), Positives = 236/346 (68%)

Query:    18 NMAAWLLGVNTLKIQPFELPSLGPYDVLVRMKAVGICGSDVHYLKTLRCADFVVKEPMVI 77
             N+   + G   L+++ + +P  GP +VL++M +VGICGSDVHY +  R  DF+VK+PMV+
Sbjct:     8 NLTLVVHGPGDLRLENYPIPEPGPNEVLLKMHSVGICGSDVHYWQHGRIGDFIVKKPMVL 67

Query:    78 GHECAGVIEKVGSEVKTLVPGDRVALEPGISCWRCDHCKGGRYNLCPEMKFFATPPVHGS 137
             GHE +G + KVGS VK L  GDRVA+EPG      + CK GRYNL P + F ATPP  G+
Sbjct:    68 GHEASGTVVKVGSLVKHLKSGDRVAIEPGALREMDEFCKIGRYNLSPSIFFCATPPDDGN 127

Query:   138 LANQVVHPADLCFKLPDNVSLEEGAMCEPLSVGLHACRRANIGPETNVLIMGAGPIGLVT 197
             L     H AD C+KLPDNV+ EEGA+ EPLSVG+HACRRA I     VL+ GAGPIGLVT
Sbjct:   128 LCQFYKHNADFCYKLPDNVTYEEGALIEPLSVGIHACRRAGITLGNKVLVCGAGPIGLVT 187

Query:   198 MLGAPRAFGAPRIVIVDVDDYRLSVAKEIGADNIVKVSTNL-QDIAEEVEKIQKAMGTGI 256
             ++ A +A GA ++++ D+   RLS AKE+GAD ++++S    ++IA +VE +   +G   
Sbjct:   188 LIVA-KAMGAGQVLVTDLSASRLSKAKEVGADIVLQISKESPKEIASKVEDM---LGCKP 243

Query:   257 DVSFDCAGLNKTMSTALGATCAGGKVCLVGMGHHEMTVPLTPAAVREVDVVGVFRYKNTW 316
             + + +C G+   + + + AT AGG + LVG+G    TVPLT A+ REVD+ GVFRY NTW
Sbjct:   244 EATIECTGVESAIQSGIYATRAGGTLVLVGLGSEMTTVPLTHASTREVDIKGVFRYCNTW 303

Query:   317 PLCLELLRSGKIDVKPLVTHRFGFSQKEVEEAFETSARGGTAIKVM 362
             P+ + +L S  ++VKPLVTHRF   +K +E AFET AR GT +KVM
Sbjct:   304 PMAISMLASKAVNVKPLVTHRFPL-EKALE-AFET-ARKGTGLKVM 346

GO:0051287 "NAD binding" evidence=IEA

GO:0051160 "L-xylitol catabolic process" evidence=IEA

GO:0046370 "fructose biosynthetic process" evidence=IEA

GO:0030317 "sperm motility" evidence=IEA

GO:0016020 "membrane" evidence=IEA

GO:0006062 "sorbitol catabolic process" evidence=IEA

GO:0005739 "mitochondrion" evidence=IEA

GO:0003939 "L-iditol 2-dehydrogenase activity" evidence=IEA

GO:0008270 "zinc ion binding" evidence=IEA

UNIPROTKB|Q00796 SORD "Sorbitol dehydrogenase" [Homo sapiens (taxid:9606)]

 Score = 834 (298.6 bits), Expect = 3.1e-83, P = 3.1e-83
 Identities = 171/346 (49%), Positives = 234/346 (67%)

Query:    18 NMAAWLLGVNTLKIQPFELPSLGPYDVLVRMKAVGICGSDVHYLKTLRCADFVVKEPMVI 77
             N++  + G   L+++ + +P  GP +VL+RM +VGICGSDVHY +  R  +F+VK+PMV+
Sbjct:     9 NLSLVVHGPGDLRLENYPIPEPGPNEVLLRMHSVGICGSDVHYWEYGRIGNFIVKKPMVL 68

Query:    78 GHECAGVIEKVGSEVKTLVPGDRVALEPGISCWRCDHCKGGRYNLCPEMKFFATPPVHGS 137
             GHE +G +EKVGS VK L PGDRVA+EPG      + CK GRYNL P + F ATPP  G+
Sbjct:    69 GHEASGTVEKVGSSVKHLKPGDRVAIEPGAPRENDEFCKMGRYNLSPSIFFCATPPDDGN 128

Query:   138 LANQVVHPADLCFKLPDNVSLEEGAMCEPLSVGLHACRRANIGPETNVLIMGAGPIGLVT 197
             L     H A  C+KLPDNV+ EEGA+ EPLSVG+HACRR  +     VL+ GAGPIG+VT
Sbjct:   129 LCRFYKHNAAFCYKLPDNVTFEEGALIEPLSVGIHACRRGGVTLGHKVLVCGAGPIGMVT 188

Query:   198 MLGAPRAFGAPRIVIVDVDDYRLSVAKEIGADNIVKVSTNL-QDIAEEVEKIQKAMGTGI 256
             +L A +A GA ++V+ D+   RLS AKEIGAD ++++S    Q+IA +VE     +G   
Sbjct:   189 LLVA-KAMGAAQVVVTDLSATRLSKAKEIGADLVLQISKESPQEIARKVEG---QLGCKP 244

Query:   257 DVSFDCAGLNKTMSTALGATCAGGKVCLVGMGHHEMTVPLTPAAVREVDVVGVFRYKNTW 316
             +V+ +C G   ++   + AT +GG + LVG+G    TVPL  AA+REVD+ GVFRY NTW
Sbjct:   245 EVTIECTGAEASIQAGIYATRSGGNLVLVGLGSEMTTVPLLHAAIREVDIKGVFRYCNTW 304

Query:   317 PLCLELLRSGKIDVKPLVTHRFGFSQKEVEEAFETSARGGTAIKVM 362
             P+ + +L S  ++VKPLVTHRF   +K +E AFET  +G   +K+M
Sbjct:   305 PVAISMLASKSVNVKPLVTHRFPL-EKALE-AFETFKKG-LGLKIM 347

GO:0031966 "mitochondrial membrane" evidence=IEA

GO:0003939 "L-iditol 2-dehydrogenase activity" evidence=ISS;IDA

GO:0008270 "zinc ion binding" evidence=ISS;IDA

GO:0006006 "glucose metabolic process" evidence=TAS

GO:0006062 "sorbitol catabolic process" evidence=IDA

GO:0051287 "NAD binding" evidence=IDA

GO:0030246 "carbohydrate binding" evidence=NAS

GO:0016020 "membrane" evidence=IDA

GO:0046370 "fructose biosynthetic process" evidence=IDA

GO:0051160 "L-xylitol catabolic process" evidence=IDA

GO:0051164 "L-xylitol metabolic process" evidence=IDA

GO:0005615 "extracellular space" evidence=TAS

GO:0030317 "sperm motility" evidence=ISS;NAS

GO:0031514 "motile cilium" evidence=ISS

UNIPROTKB|Q5R5F3 SORD "Sorbitol dehydrogenase" [Pongo abelii (taxid:9601)]

 Score = 834 (298.6 bits), Expect = 3.1e-83, P = 3.1e-83
 Identities = 170/346 (49%), Positives = 235/346 (67%)

Query:    18 NMAAWLLGVNTLKIQPFELPSLGPYDVLVRMKAVGICGSDVHYLKTLRCADFVVKEPMVI 77
             N++  + G   L+++ + +P  GP +VL+RM +VGICGSDVHY +  R  +F+VK+PMV+
Sbjct:     9 NLSLVVHGPGDLRLENYPIPEPGPNEVLLRMHSVGICGSDVHYWEDGRIGNFIVKKPMVL 68

Query:    78 GHECAGVIEKVGSEVKTLVPGDRVALEPGISCWRCDHCKGGRYNLCPEMKFFATPPVHGS 137
             GHE +G +EKVGS VK L PGDRVA+EPG      + CK GRYNL P + F ATPP  G+
Sbjct:    69 GHEASGTVEKVGSLVKHLKPGDRVAIEPGAPRENDEFCKIGRYNLSPSIFFCATPPDDGN 128

Query:   138 LANQVVHPADLCFKLPDNVSLEEGAMCEPLSVGLHACRRANIGPETNVLIMGAGPIGLVT 197
             L     H A  C+KLPDNV+ EEGAM EPLSVG+HACRR  +     VL+ GAGPIG+VT
Sbjct:   129 LCRFYKHNAAFCYKLPDNVTFEEGAMIEPLSVGIHACRRGGVTLGHKVLVCGAGPIGMVT 188

Query:   198 MLGAPRAFGAPRIVIVDVDDYRLSVAKEIGADNIVKVSTNL-QDIAEEVEKIQKAMGTGI 256
             +L A +A GA ++V+ D+   RLS AKEIGAD ++++S    Q+IA +VE +   +G   
Sbjct:   189 LLVA-KAMGAAQVVVTDLSATRLSKAKEIGADLVLQISKESPQEIARKVEGL---LGCKP 244

Query:   257 DVSFDCAGLNKTMSTALGATCAGGKVCLVGMGHHEMTVPLTPAAVREVDVVGVFRYKNTW 316
             +V+ +C G   ++   + AT +GG + LVG+G    T+PL  AA+REVD+ GVFRY NTW
Sbjct:   245 EVTIECTGAGASIQAGIYATHSGGTLVLVGLGSEMTTIPLLHAAIREVDIKGVFRYCNTW 304

Query:   317 PLCLELLRSGKIDVKPLVTHRFGFSQKEVEEAFETSARGGTAIKVM 362
             P+ + +L S  ++VKPL+THRF   +K +E AFET  +G   +K+M
Sbjct:   305 PVAISMLASKSVNVKPLITHRFPL-EKALE-AFETFKKG-LGLKIM 347

GO:0030317 "sperm motility" evidence=ISS

GO:0031514 "motile cilium" evidence=ISS

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Prediction of Enzyme Commission (EC) Number

EC Number Prediction by Annotation Transfer from SWISS-PROT Entries

Original result of BLAST against SWISS-PROT

ID	Name	Annotated EC number	Identity	Query coverage	Hit coverage	RBH(Q2H)	RBH(H2Q)
A8GLC6	TDH_SERP5	1, ., 1, ., 1, ., 1, 0, 3	0.3232	0.8657	0.9266	yes	no
Q64442	DHSO_MOUSE	1, ., 1, ., 1, ., 1, 4	0.4885	0.9315	0.9523	yes	no
A2QY54	XYL2_ASPNC	1, ., 1, ., 1, ., 9	0.4107	0.9232	0.9413	yes	no
Q5ARL6	XYL2_EMENI	1, ., 1, ., 1, ., 9	0.4080	0.9369	0.9526	yes	no
P27867	DHSO_RAT	1, ., 1, ., 1, ., 1, 4	0.4942	0.9315	0.9523	yes	no
A1JHX8	TDH_YERE8	1, ., 1, ., 1, ., 1, 0, 3	0.3253	0.8630	0.9237	yes	no
Q92MT4	XYLD_RHIME	1, ., 1, ., 1, ., 9	0.4117	0.8191	0.8641	yes	no
Q58D31	DHSO_BOVIN	1, ., 1, ., 1, ., 1, 4	0.4927	0.9287	0.9522	yes	no
B2JYP4	TDH_YERPB	1, ., 1, ., 1, ., 1, 0, 3	0.3222	0.8630	0.9237	yes	no
Q1CD13	TDH_YERPN	1, ., 1, ., 1, ., 1, 0, 3	0.3222	0.8630	0.9237	yes	no
Q07786	DHSO2_YEAST	1, ., 1, ., 1, ., 1, 4	0.3909	0.9452	0.9663	yes	no
Q48AM4	TDH_COLP3	1, ., 1, ., 1, ., 1, 0, 3	0.3183	0.8712	0.9325	yes	no
Q00796	DHSO_HUMAN	1, ., 1, ., 1, ., 1, 4	0.4885	0.9315	0.9523	yes	no
A4TSC6	TDH_YERPP	1, ., 1, ., 1, ., 1, 0, 3	0.3222	0.8630	0.9237	yes	no
B1JQW2	TDH_YERPY	1, ., 1, ., 1, ., 1, 0, 3	0.3222	0.8630	0.9237	yes	no
Q5GN51	XYL2_ASPNG	1, ., 1, ., 1, ., 9	0.4107	0.9232	0.9413	yes	no
P36624	DHSO_SCHPO	1, ., 1, ., 1, ., 1, 4	0.4156	0.8520	0.8638	yes	no
Q98D10	XYLD_RHILO	1, ., 1, ., 1, ., 9	0.3841	0.8767	0.9195	yes	no
Q1PSI9	IDND_VITVI	1, ., 1, ., 1, ., n, 8	0.7907	0.9945	0.9918	no	no
A7HEI5	TDH_ANADF	1, ., 1, ., 1, ., 1, 0, 3	0.3233	0.8630	0.9183	yes	no
B0TYR8	TDH_FRAP2	1, ., 1, ., 1, ., 1, 0, 3	0.3220	0.8602	0.8945	yes	no
P35497	DHSO1_YEAST	1, ., 1, ., 1, ., 1, 4	0.3937	0.9452	0.9663	yes	no
A7FCU5	TDH_YERP3	1, ., 1, ., 1, ., 1, 0, 3	0.3222	0.8630	0.9237	yes	no
Q66GC5	TDH_YERPS	1, ., 1, ., 1, ., 1, 0, 3	0.3222	0.8630	0.9237	yes	no
P22144	XYL2_PICST	1, ., 1, ., 1, ., 9	0.3506	0.9287	0.9338	yes	no
Q4WAU7	XYL2_ASPFU	1, ., 1, ., 1, ., 9	0.4252	0.9315	0.9497	yes	no
Q06004	DHSO_BACSU	1, ., 1, ., 1, ., 1, 4	0.4018	0.8767	0.9065	yes	no
Q5R5F3	DHSO_PONAB	1, ., 1, ., 1, ., 1, 4	0.4856	0.9315	0.9523	yes	no
Q8U7Y1	XYLD_AGRT5	1, ., 1, ., 1, ., 9	0.3831	0.8493	0.8857	yes	no

EC Number Prediction by Ezypred Server

Original result from Ezypred Server

Fail to connect to Ezypred Server

EC Number Prediction by EFICAz Software

Prediction Level	EC number	Confidence of Prediction
3rd Layer	1.1.1	0.983
4th Layer	1.1.1.14	LOW CONFIDENCE prediction!
4th Layer	1.1.1.n8	0.979

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Prediction of Functionally Associated Proteins

Functionally Associated Proteins Detected by STRING

Original result from the STRING server

Fail to connect to STRING server

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Conserved Domains and Related Protein Families

Conserved Domains Detected by RPS-BLAST

Original result of RPS-BLAST against CDD database part I

ID	Length	Definition	E-value
Query	365
PLN02702	364	PLN02702, PLN02702, L-idonate 5-dehydrogenase	0.0
cd05285	343	cd05285, sorbitol_DH, Sorbitol dehydrogenase	0.0
cd08232	339	cd08232, idonate-5-DH, L-idonate 5-dehydrogenase	7e-99
cd08236	343	cd08236, sugar_DH, NAD(P)-dependent sugar dehydrog	1e-89
COG1063	350	COG1063, Tdh, Threonine dehydrogenase and related	3e-89
cd08234	334	cd08234, threonine_DH_like, L-threonine dehydrogen	6e-88
cd08235	343	cd08235, iditol_2_DH_like, L-iditol 2-dehydrogenas	4e-82
cd08233	351	cd08233, butanediol_DH_like, (2R,3R)-2,3-butanedio	2e-80
cd08261	337	cd08261, Zn_ADH7, Alcohol dehydrogenases of the MD	9e-75
cd05188	271	cd05188, MDR, Medium chain reductase/dehydrogenase	2e-65
cd08258	306	cd08258, Zn_ADH4, Alcohol dehydrogenases of the MD	2e-62
PRK05396	341	PRK05396, tdh, L-threonine 3-dehydrogenase; Valida	2e-61
cd05281	341	cd05281, TDH, Threonine dehydrogenase	5e-61
TIGR00692	340	TIGR00692, tdh, L-threonine 3-dehydrogenase	5e-60
cd08239	339	cd08239, THR_DH_like, L-threonine dehydrogenase (T	9e-60
cd05278	347	cd05278, FDH_like, Formaldehyde dehydrogenases	9e-60
cd08254	338	cd08254, hydroxyacyl_CoA_DH, 6-hydroxycyclohex-1-e	3e-57
PRK09880	343	PRK09880, PRK09880, L-idonate 5-dehydrogenase; Pro	6e-57
cd08279	363	cd08279, Zn_ADH_class_III, Class III alcohol dehyd	3e-55
COG1064	339	COG1064, AdhP, Zn-dependent alcohol dehydrogenases	2e-54
COG1062	366	COG1062, AdhC, Zn-dependent alcohol dehydrogenases	5e-53
cd08285	351	cd08285, NADP_ADH, NADP(H)-dependent alcohol dehyd	1e-52
cd05284	340	cd05284, arabinose_DH_like, D-arabinose dehydrogen	9e-52
cd08231	361	cd08231, MDR_TM0436_like, Hypothetical enzyme TM04	1e-50
cd08256	350	cd08256, Zn_ADH2, Alcohol dehydrogenases of the MD	2e-50
cd08286	345	cd08286, FDH_like_ADH2, formaldehyde dehydrogenase	8e-50
cd08284	344	cd08284, FDH_like_2, Glutathione-dependent formald	4e-49
cd08278	365	cd08278, benzyl_alcohol_DH, Benzyl alcohol dehydro	9e-47
cd08262	341	cd08262, Zn_ADH8, Alcohol dehydrogenases of the MD	5e-46
cd08259	332	cd08259, Zn_ADH5, Alcohol dehydrogenases of the MD	2e-44
cd08283	386	cd08283, FDH_like_1, Glutathione-dependent formald	6e-44
PRK10083	339	PRK10083, PRK10083, putative oxidoreductase; Provi	5e-43
PRK10309	347	PRK10309, PRK10309, galactitol-1-phosphate dehydro	6e-43
cd08265	384	cd08265, Zn_ADH3, Alcohol dehydrogenases of the MD	7e-43
cd05279	365	cd05279, Zn_ADH1, Liver alcohol dehydrogenase and	1e-42
cd08263	367	cd08263, Zn_ADH10, Alcohol dehydrogenases of the M	3e-42
cd08260	345	cd08260, Zn_ADH6, Alcohol dehydrogenases of the MD	1e-41
cd08269	312	cd08269, Zn_ADH9, Alcohol dehydrogenases of the MD	8e-40
cd08240	350	cd08240, 6_hydroxyhexanoate_dh_like, 6-hydroxyhexa	1e-39
cd08281	371	cd08281, liver_ADH_like1, Zinc-dependent alcohol d	1e-39
cd08242	319	cd08242, MDR_like, Medium chain dehydrogenases/red	4e-39
cd08245	330	cd08245, CAD, Cinnamyl alcohol dehydrogenases (CAD	1e-38
pfam08240	108	pfam08240, ADH_N, Alcohol dehydrogenase GroES-like	9e-38
cd08297	341	cd08297, CAD3, Cinnamyl alcohol dehydrogenases (CA	5e-37
COG0604	326	COG0604, Qor, NADPH:quinone reductase and related	2e-36
cd05283	337	cd05283, CAD1, Cinnamyl alcohol dehydrogenases (CA	9e-36
cd08287	345	cd08287, FDH_like_ADH3, formaldehyde dehydrogenase	6e-35
cd08266	342	cd08266, Zn_ADH_like1, Alcohol dehydrogenases of t	1e-34
cd08277	365	cd08277, liver_alcohol_DH_like, Liver alcohol dehy	3e-33
cd08255	277	cd08255, 2-desacetyl-2-hydroxyethyl_bacteriochloro	9e-32
cd08282	375	cd08282, PFDH_like, Pseudomonas putida aldehyde-di	4e-31
TIGR03451	358	TIGR03451, mycoS_dep_FDH, S-(hydroxymethyl)mycothi	5e-30
PRK13771	334	PRK13771, PRK13771, putative alcohol dehydrogenase	5e-30
cd08301	369	cd08301, alcohol_DH_plants, Plant alcohol dehydrog	1e-27
cd05289	309	cd05289, MDR_like_2, alcohol dehydrogenase and qui	7e-27
cd08299	373	cd08299, alcohol_DH_class_I_II_IV, class I, II, IV	2e-26
TIGR03989	369	TIGR03989, Rxyl_3153, oxidoreductase, Rxyl_3153 fa	3e-26
PRK09422	338	PRK09422, PRK09422, ethanol-active dehydrogenase/a	7e-26
cd08298	329	cd08298, CAD2, Cinnamyl alcohol dehydrogenases (CA	1e-25
cd08241	323	cd08241, QOR1, Quinone oxidoreductase (QOR)	6e-25
cd05286	320	cd05286, QOR2, Quinone oxidoreductase (QOR)	3e-24
cd08249	339	cd08249, enoyl_reductase_like, enoyl_reductase_lik	6e-24
TIGR02818	368	TIGR02818, adh_III_F_hyde, S-(hydroxymethyl)glutat	2e-23
cd08300	368	cd08300, alcohol_DH_class_III, class III alcohol d	4e-23
cd08276	336	cd08276, MDR7, Medium chain dehydrogenases/reducta	6e-23
cd08264	325	cd08264, Zn_ADH_like2, Alcohol dehydrogenases of t	1e-22
pfam00107	131	pfam00107, ADH_zinc_N, Zinc-binding dehydrogenase	1e-22
cd08272	326	cd08272, MDR6, Medium chain dehydrogenases/reducta	3e-22
cd08253	325	cd08253, zeta_crystallin, Zeta-crystallin with NAD	3e-22
PLN02740	381	PLN02740, PLN02740, Alcohol dehydrogenase-like	3e-22
TIGR03201	349	TIGR03201, dearomat_had, 6-hydroxycyclohex-1-ene-1	4e-22
cd08268	328	cd08268, MDR2, Medium chain dehydrogenases/reducta	1e-21
cd05282	323	cd05282, ETR_like, 2-enoyl thioester reductase-lik	1e-19
cd08230	355	cd08230, glucose_DH, Glucose dehydrogenase	1e-19
cd08267	319	cd08267, MDR1, Medium chain dehydrogenases/reducta	3e-19
PLN02586	360	PLN02586, PLN02586, probable cinnamyl alcohol dehy	6e-18
cd08296	333	cd08296, CAD_like, Cinnamyl alcohol dehydrogenases	8e-18
PLN02827	378	PLN02827, PLN02827, Alcohol dehydrogenase-like	1e-17
cd05276	323	cd05276, p53_inducible_oxidoreductase, PIG3 p53-in	5e-17
TIGR02819	393	TIGR02819, fdhA_non_GSH, formaldehyde dehydrogenas	6e-17
cd08238	410	cd08238, sorbose_phosphate_red, L-sorbose-1-phosph	1e-16
cd08275	337	cd08275, MDR3, Medium chain dehydrogenases/reducta	2e-16
cd05195	293	cd05195, enoyl_red, enoyl reductase of polyketide	5e-16
TIGR03366	280	TIGR03366, HpnZ_proposed, putative phosphonate cat	1e-14
TIGR02824	325	TIGR02824, quinone_pig3, putative NAD(P)H quinone	2e-14
cd08248	350	cd08248, RTN4I1, Human Reticulon 4 Interacting Pro	7e-14
cd08271	325	cd08271, MDR5, Medium chain dehydrogenases/reducta	2e-13
smart00829	287	smart00829, PKS_ER, Enoylreductase	1e-12
cd08291	324	cd08291, ETR_like_1, 2-enoyl thioester reductase (	5e-12
TIGR02822	329	TIGR02822, adh_fam_2, zinc-binding alcohol dehydro	5e-12
PLN02178	375	PLN02178, PLN02178, cinnamyl-alcohol dehydrogenase	3e-11
cd08237	341	cd08237, ribitol-5-phosphate_DH, ribitol-5-phospha	5e-11
PTZ00354	334	PTZ00354, PTZ00354, alcohol dehydrogenase; Provisi	1e-10
PLN02514	357	PLN02514, PLN02514, cinnamyl-alcohol dehydrogenase	3e-10
cd08246	393	cd08246, crotonyl_coA_red, crotonyl-CoA reductase	5e-10
cd08252	336	cd08252, AL_MDR, Arginate lyase and other MDR fami	8e-09
cd08292	324	cd08292, ETR_like_2, 2-enoyl thioester reductase (	2e-08
cd08273	331	cd08273, MDR8, Medium chain dehydrogenases/reducta	5e-08
TIGR01751	398	TIGR01751, crot-CoA-red, crotonyl-CoA reductase	7e-08
cd08243	320	cd08243, quinone_oxidoreductase_like_1, Quinone ox	8e-08
cd08244	324	cd08244, MDR_enoyl_red, Possible enoyl reductase	2e-07
cd08290	341	cd08290, ETR, 2-enoyl thioester reductase (ETR)	3e-07
cd08251	303	cd08251, polyketide_synthase, polyketide synthase	8e-07
PRK10754	327	PRK10754, PRK10754, quinone oxidoreductase, NADPH-	2e-06
pfam13602	129	pfam13602, ADH_zinc_N_2, Zinc-binding dehydrogenas	6e-06
cd08247	352	cd08247, AST1_like, AST1 is a cytoplasmic protein	8e-06
cd08250	329	cd08250, Mgc45594_like, Mgc45594 gene product and	2e-05
TIGR01202	308	TIGR01202, bchC, 2-desacetyl-2-hydroxyethyl bacter	6e-05
cd08274	350	cd08274, MDR9, Medium chain dehydrogenases/reducta	4e-04
TIGR02817	336	TIGR02817, adh_fam_1, zinc-binding alcohol dehydro	9e-04

>gnl|CDD|215378 PLN02702, PLN02702, L-idonate 5-dehydrogenase

 Score =  735 bits (1899), Expect = 0.0
 Identities = 319/365 (87%), Positives = 338/365 (92%), Gaps = 1/365 (0%)

Query: 1   MGKGGMSQGEKEDGEEVNMAAWLLGVNTLKIQPFELPSLGPYDVLVRMKAVGICGSDVHY 60
           MGKGGMS GE    EE NMAAWL+GVNTLKIQPF+LP LGP+DV VRMKAVGICGSDVHY
Sbjct: 1   MGKGGMSSGEGSGVEEENMAAWLVGVNTLKIQPFKLPPLGPHDVRVRMKAVGICGSDVHY 60

Query: 61  LKTLRCADFVVKEPMVIGHECAGVIEKVGSEVKTLVPGDRVALEPGISCWRCDHCKGGRY 120
           LKT+RCADFVVKEPMVIGHECAG+IE+VGSEVK LV GDRVALEPGISCWRC+ CK GRY
Sbjct: 61  LKTMRCADFVVKEPMVIGHECAGIIEEVGSEVKHLVVGDRVALEPGISCWRCNLCKEGRY 120

Query: 121 NLCPEMKFFATPPVHGSLANQVVHPADLCFKLPDNVSLEEGAMCEPLSVGLHACRRANIG 180
           NLCPEMKFFATPPVHGSLANQVVHPADLCFKLP+NVSLEEGAMCEPLSVG+HACRRANIG
Sbjct: 121 NLCPEMKFFATPPVHGSLANQVVHPADLCFKLPENVSLEEGAMCEPLSVGVHACRRANIG 180

Query: 181 PETNVLIMGAGPIGLVTMLGAPRAFGAPRIVIVDVDDYRLSVAKEIGADNIVKVSTNLQD 240
           PETNVL+MGAGPIGLVTML A RAFGAPRIVIVDVDD RLSVAK++GAD IV VSTN++D
Sbjct: 181 PETNVLVMGAGPIGLVTMLAA-RAFGAPRIVIVDVDDERLSVAKQLGADEIVLVSTNIED 239

Query: 241 IAEEVEKIQKAMGTGIDVSFDCAGLNKTMSTALGATCAGGKVCLVGMGHHEMTVPLTPAA 300
           +  EVE+IQKAMG GIDVSFDC G NKTMSTAL AT AGGKVCLVGMGH+EMTVPLTPAA
Sbjct: 240 VESEVEEIQKAMGGGIDVSFDCVGFNKTMSTALEATRAGGKVCLVGMGHNEMTVPLTPAA 299

Query: 301 VREVDVVGVFRYKNTWPLCLELLRSGKIDVKPLVTHRFGFSQKEVEEAFETSARGGTAIK 360
            REVDVVGVFRY+NTWPLCLE LRSGKIDVKPL+THRFGFSQKEVEEAFETSARGG AIK
Sbjct: 300 AREVDVVGVFRYRNTWPLCLEFLRSGKIDVKPLITHRFGFSQKEVEEAFETSARGGNAIK 359

Query: 361 VMFNL 365
           VMFNL
Sbjct: 360 VMFNL 364

Length = 364

>gnl|CDD|176188 cd05285, sorbitol_DH, Sorbitol dehydrogenase

 Score =  520 bits (1343), Expect = 0.0
 Identities = 195/347 (56%), Positives = 244/347 (70%), Gaps = 7/347 (2%)

Query: 20  AAWLLGVNTLKIQPFELPSLGPYDVLVRMKAVGICGSDVHYLKTLRCADFVVKEPMVIGH 79
           AA L G   L+++   +P  GP +VLVR++AVGICGSDVHY K  R  DFVVKEPMV+GH
Sbjct: 1   AAVLHGPGDLRLEERPIPEPGPGEVLVRVRAVGICGSDVHYYKHGRIGDFVVKEPMVLGH 60

Query: 80  ECAGVIEKVGSEVKTLVPGDRVALEPGISCWRCDHCKGGRYNLCPEMKFFATPPVHGSLA 139
           E AG +  VGS V  L  GDRVA+EPG+ C  C+ CK GRYNLCP+M+F ATPPV G+L 
Sbjct: 61  ESAGTVVAVGSGVTHLKVGDRVAIEPGVPCRTCEFCKSGRYNLCPDMRFAATPPVDGTLC 120

Query: 140 NQVVHPADLCFKLPDNVSLEEGAMCEPLSVGLHACRRANIGPETNVLIMGAGPIGLVTML 199
             V HPAD C KLPDNVSLEEGA+ EPLSVG+HACRRA + P   VL+ GAGPIGL+T  
Sbjct: 121 RYVNHPADFCHKLPDNVSLEEGALVEPLSVGVHACRRAGVRPGDTVLVFGAGPIGLLTAA 180

Query: 200 GAPRAFGAPRIVIVDVDDYRLSVAKEIGADNIVKVSTNLQDIAEEVEKIQKAMGT-GIDV 258
            A +AFGA ++V+ D+D  RL  AKE+GA + V V T  +D  E  EKI + +G  G DV
Sbjct: 181 VA-KAFGATKVVVTDIDPSRLEFAKELGATHTVNVRT--EDTPESAEKIAELLGGKGPDV 237

Query: 259 SFDCAGLNKTMSTALGATCAGGKVCLVGMGHHEMTVPLTPAAVREVDVVGVFRYKNTWPL 318
             +C G    + TA+ AT  GG V LVGMG  E+T+PL+ A++RE+D+ GVFRY NT+P 
Sbjct: 238 VIECTGAESCIQTAIYATRPGGTVVLVGMGKPEVTLPLSAASLREIDIRGVFRYANTYPT 297

Query: 319 CLELLRSGKIDVKPLVTHRFGFSQKEVEEAFETSARG-GTAIKVMFN 364
            +ELL SGK+DVKPL+THRF    ++  EAFET+A+G    IKV+  
Sbjct: 298 AIELLASGKVDVKPLITHRFPL--EDAVEAFETAAKGKKGVIKVVIE 342

Sorbitol and aldose reductase are NAD(+) binding proteins of the polyol pathway, which interconverts glucose and fructose. Sorbitol dehydrogenase is tetrameric and has a single catalytic zinc per subunit. Aldose reductase catalyzes the NADP(H)-dependent conversion of glucose to sorbital, and SDH uses NAD(H) in the conversion of sorbitol to fructose. NAD(P)(H)-dependent oxidoreductases are the major enzymes in the interconversion of alcohols and aldehydes, or ketones. The medium chain alcohol dehydrogenase family (MDR) have a NAD(P)(H)-binding domain in a Rossmann fold of a beta-alpha form. The N-terminal region typically has an all-beta catalytic domain. These proteins typically form dimers (typically higher plants, mammals) or tetramers (yeast, bacteria), and have 2 tightly bound zinc atoms per subunit. Length = 343

>gnl|CDD|176194 cd08232, idonate-5-DH, L-idonate 5-dehydrogenase

 Score =  296 bits (759), Expect = 7e-99
 Identities = 130/342 (38%), Positives = 181/342 (52%), Gaps = 14/342 (4%)

Query: 25  GVNTLKIQPFELPSLGPYDVLVRMKAVGICGSDVHYLKTLRCADFVVKEPMVIGHECAGV 84
               L+++    P  GP +V VR+ A GICGSD+HY +        ++EPMV+GHE +GV
Sbjct: 5   AAGDLRVEERPAPEPGPGEVRVRVAAGGICGSDLHYYQHGGFGTVRLREPMVLGHEVSGV 64

Query: 85  IEKVGSEVKTLVPGDRVALEPGISCWRCDHCKGGRYNLCPEMKFFA----TPPVHGSLAN 140
           +E VG  V  L PG RVA+ P   C  CD+C+ GR NLC  M+F       P V G    
Sbjct: 65  VEAVGPGVTGLAPGQRVAVNPSRPCGTCDYCRAGRPNLCLNMRFLGSAMRFPHVQGGFRE 124

Query: 141 QVVHPADLCFKLPDNVSLEEGAMCEPLSVGLHACRRANIGPETNVLIMGAGPIGLVTMLG 200
            +V  A  C  LPD +SL   A+ EPL+V LHA  RA       VL+ GAGPIG + +  
Sbjct: 125 YLVVDASQCVPLPDGLSLRRAALAEPLAVALHAVNRAGDLAGKRVLVTGAGPIGALVVAA 184

Query: 201 APRAFGAPRIVIVDVDDYRLSVAKEIGADNIVKVSTNLQDIAEEVEKIQKAMGTGIDVSF 260
           A RA GA  IV  D+ D  L+VA+ +GAD  V       ++A +      A     DV F
Sbjct: 185 ARRA-GAAEIVATDLADAPLAVARAMGADETV-------NLARDPLAAYAADKGDFDVVF 236

Query: 261 DCAGLNKTMSTALGATCAGGKVCLVGMGHHEMTVPLTPAAVREVDVVGVFRYKNTWPLCL 320
           + +G    +++AL     GG V  VGM    + +PL     +E+D+ G FR+ + +   +
Sbjct: 237 EASGAPAALASALRVVRPGGTVVQVGMLGGPVPLPLNALVAKELDLRGSFRFDDEFAEAV 296

Query: 321 ELLRSGKIDVKPLVTHRFGFSQKEVEEAFETSARGGTAIKVM 362
            LL +G+IDV+PL+T  F     E  EAF  +A    ++KV 
Sbjct: 297 RLLAAGRIDVRPLITAVFPLE--EAAEAFALAADRTRSVKVQ 336

L-idonate 5-dehydrogenase (L-ido 5-DH ) catalyzes the conversion of L-lodonate to 5-ketogluconate in the metabolism of L-Idonate to 6-P-gluconate. In E. coli, this GntII pathway is a subsidiary pathway to the canonical GntI system, which also phosphorylates and transports gluconate. L-ido 5-DH is found in an operon with a regulator indR, transporter idnT, 5-keto-D-gluconate 5-reductase, and Gnt kinase. L-ido 5-DH is a zinc-dependent alcohol dehydrogenase-like protein. The alcohol dehydrogenase ADH-like family of proteins is a diverse group of proteins related to the first identified member, class I mammalian ADH. This group is also called the medium chain dehydrogenases/reductase family (MDR) which displays a broad range of activities and are distinguished from the smaller short chain dehydrogenases(~ 250 amino acids vs. the ~ 350 amino acids of the MDR). The MDR proteins have 2 domains: a C-terminal NAD(P) binding-Rossmann fold domain of a beta-alpha form and an N-terminal GroES-like catalytic domain. The MDR group contains a host of activities, including the founding alcohol dehydrogenase (ADH), quinone reductase, sorbitol dehydrogenase, formaldehyde dehydrogenase, butanediol DH, ketose reductase, cinnamyl reductase, and numerous others. The zinc-dependent alcohol dehydrogenases (ADHs) catalyze the NAD(P)(H)-dependent interconversion of alcohols to aldehydes or ketones. ADH-like proteins typically form dimers (typically higher plants, mammals) or tetramers (yeast, bacteria), and generally have 2 tightly bound zinc atoms per subunit. The active site zinc is coordinated by a histidine, two cysteines, and a water molecule. The second zinc seems to play a structural role, affects subunit interactions, and is typically coordinated by 4 cysteines. Length = 339

>gnl|CDD|176198 cd08236, sugar_DH, NAD(P)-dependent sugar dehydrogenases

 Score =  272 bits (698), Expect = 1e-89
 Identities = 135/360 (37%), Positives = 196/360 (54%), Gaps = 32/360 (8%)

Query: 19  MAAWLL-GVNTLKIQPFELPSLGPYDVLVRMKAVGICGSDVH-YLKTLRCADFVVKEPMV 76
           M A +L G   L+ +    P  GP +VLV++KA GICGSD+  YL T          P+V
Sbjct: 1   MKALVLTGPGDLRYEDIPKPEPGPGEVLVKVKACGICGSDIPRYLGT-----GAYHPPLV 55

Query: 77  IGHECAGVIEKVGSEVKTLVPGDRVALEPGISCWRCDHCKGGRYNLCPEMKFFATPPVHG 136
           +GHE +G +E+VGS V  L  GDRVA+ P + C +C++CK G Y+LC    +  +    G
Sbjct: 56  LGHEFSGTVEEVGSGVDDLAVGDRVAVNPLLPCGKCEYCKKGEYSLCSNYDYIGSR-RDG 114

Query: 137 SLANQVVHPADLCFKLPDNVSLEEGAMCEPLSVGLHACRRANIGPETNVLIMGAGPIGLV 196
           + A  V  PA    K+PD+V  EE AM EP +V LHA R A I     V+++GAG IGL+
Sbjct: 115 AFAEYVSVPARNLIKIPDHVDYEEAAMIEPAAVALHAVRLAGITLGDTVVVIGAGTIGLL 174

Query: 197 TMLGAPRAFGAPRIVIVDVDDYRLSVAKEIGADNIVKVSTNLQDIAEEVEKIQKAM-GTG 255
            +    +  GA R++ VD+DD +L+VA+E+GAD+ +          E+VEK+++   G G
Sbjct: 175 AIQWL-KILGAKRVIAVDIDDEKLAVARELGADDTINPKE------EDVEKVRELTEGRG 227

Query: 256 IDVSFDCAGLNKTMSTALGATCAGGKVCLVGMGHHEMTVPLTPAAV-----REVDVVGVF 310
            D+  + AG   T+  AL     GGKV LVG+ + ++T  L+  A      +E+ + G +
Sbjct: 228 ADLVIEAAGSPATIEQALALARPGGKVVLVGIPYGDVT--LSEEAFEKILRKELTIQGSW 285

Query: 311 RYKNT------WPLCLELLRSGKIDVKPLVTHRFGFSQKEVEEAFETSARGGTA-IKVMF 363
              +       W   L+LL SGKI V+PL+THR      +   AFE  A       KV+ 
Sbjct: 286 NSYSAPFPGDEWRTALDLLASGKIKVEPLITHRLPLE--DGPAAFERLADREEFSGKVLL 343

This group contains proteins identified as sorbitol dehydrogenases and other sugar dehydrogenases of the medium-chain dehydrogenase/reductase family (MDR), which includes zinc-dependent alcohol dehydrogenase and related proteins. Sorbitol and aldose reductase are NAD(+) binding proteins of the polyol pathway, which interconverts glucose and fructose. Sorbitol dehydrogenase is tetrameric and has a single catalytic zinc per subunit. NAD(P)(H)-dependent oxidoreductases are the major enzymes in the interconversion of alcohols and aldehydes, or ketones. Related proteins include threonine dehydrogenase, formaldehyde dehydrogenase, and butanediol dehydrogenase. The medium chain alcohol dehydrogenase family (MDR) has a NAD(P)(H)-binding domain in a Rossmann fold of a beta-alpha form. The N-terminal region typically has an all-beta catalytic domain. These proteins typically form dimers (typically higher plants, mammals) or tetramers (yeast, bacteria), and have 2 tightly bound zinc atoms per subunit. Horse liver alcohol dehydrogenase is a dimeric enzyme and each subunit has two domains. The NAD binding domain is in a Rossmann fold and the catalytic domain contains a zinc ion to which substrates bind. There is a cleft between the domains that closes upon formation of the ternary complex. Length = 343

>gnl|CDD|223991 COG1063, Tdh, Threonine dehydrogenase and related Zn-dependent dehydrogenases [Amino acid transport and metabolism / General function prediction only]

 Score =  272 bits (697), Expect = 3e-89
 Identities = 121/355 (34%), Positives = 176/355 (49%), Gaps = 19/355 (5%)

Query: 20  AAWLLGVNTLKIQPFELPSLGPYDVLVRMKAVGICGSDVHYLKTLRCADFVVKEPMVIGH 79
           A   +G   ++++    P  GP DVL+R+ A GICGSD+H  +      FV    +++GH
Sbjct: 4   AVVYVGGGDVRLEEPPPPIPGPGDVLIRVTATGICGSDLHIYRGGE--PFVPPGDIILGH 61

Query: 80  ECAGVIEKVGSEVKTLVPGDRVALEPGISCWRCDHCKGGRYNLCPEMKFFAT----PPVH 135
           E  G + +VG  V+    GDRV +EP I C  C +C+ G YNLC    F+        + 
Sbjct: 62  EFVGEVVEVG-VVRGFKVGDRVVVEPNIPCGHCRYCRAGEYNLCENPGFYGYAGLGGGID 120

Query: 136 GSLANQVVHPAD-LCFKLPDNVSLEEGAMCEPLSVGLHAC-RRANIGPETNVLIMGAGPI 193
           G  A  V  PAD    KLPD +  E  A+ EPL+   H    RA + P   V+++GAGPI
Sbjct: 121 GGFAEYVRVPADFNLAKLPDGIDEEAAALTEPLATAYHGHAERAAVRPGGTVVVVGAGPI 180

Query: 194 GLVTMLGAPRAFGAPRIVIVDVDDYRLSVAKEIGADNIVKVSTNLQDIAEEVEKIQKAMG 253
           GL+ +  A +  GA  +++VD    RL +AKE G  ++V    N  +     E ++   G
Sbjct: 181 GLLAIALA-KLLGASVVIVVDRSPERLELAKEAGGADVV---VNPSEDDAGAEILELTGG 236

Query: 254 TGIDVSFDCAGLNKTMSTALGATCAGGKVCLVGMGHHEMTVPLTPAAV-REVDVVGVFR- 311
            G DV  +  G    +  AL A   GG V +VG+   E         V +E+ + G  R 
Sbjct: 237 RGADVVIEAVGSPPALDQALEALRPGGTVVVVGVYGGEDIPLPAGLVVSKELTLRGSLRP 296

Query: 312 -YKNTWPLCLELLRSGKIDVKPLVTHRFGFSQKEVEEAFET-SARGGTAIKVMFN 364
             +  +   L+LL SGKID + L+THR      +  EA+E  + R   AIKV+  
Sbjct: 297 SGREDFERALDLLASGKIDPEKLITHRLPLD--DAAEAYELFADRKEEAIKVVLK 349

Length = 350

>gnl|CDD|176196 cd08234, threonine_DH_like, L-threonine dehydrogenase

 Score =  267 bits (686), Expect = 6e-88
 Identities = 125/347 (36%), Positives = 187/347 (53%), Gaps = 17/347 (4%)

Query: 20  AAWLLGVNTLKIQPFELPSLGPYDVLVRMKAVGICGSDVHYLKTLRCADFVVKEPMVIGH 79
           A    G   L+++   +P  GP +VL+++ A GICG+D+H  +     +F    P+V GH
Sbjct: 3   ALVYEGPGELEVEEVPVPEPGPDEVLIKVAACGICGTDLHIYE----GEFGAAPPLVPGH 58

Query: 80  ECAGVIEKVGSEVKTLVPGDRVALEPGISCWRCDHCKGGRYNLCPEMKFFATPPVHGSLA 139
           E AGV+  VGS+V     GDRVA++P I C  C +C+ GR NLC  +        +G  A
Sbjct: 59  EFAGVVVAVGSKVTGFKVGDRVAVDPNIYCGECFYCRRGRPNLCENLTAVGV-TRNGGFA 117

Query: 140 NQVVHPADLCFKLPDNVSLEEGAMCEPLSVGLHACRRANIGPETNVLIMGAGPIGLVTML 199
             VV PA   +K+PDN+S EE A+ EPLS  +H      I P  +VL+ GAGPIGL+ + 
Sbjct: 118 EYVVVPAKQVYKIPDNLSFEEAALAEPLSCAVHGLDLLGIKPGDSVLVFGAGPIGLL-LA 176

Query: 200 GAPRAFGAPRIVIVDVDDYRLSVAKEIGADNIVKVSTNLQDIAEEVEKIQKAMGTGIDVS 259
              +  GA R+ + + ++ +L +AK++GA   V          E+ E  ++    G DV 
Sbjct: 177 QLLKLNGASRVTVAEPNEEKLELAKKLGATETV------DPSREDPEAQKEDNPYGFDVV 230

Query: 260 FDCAGLNKTMSTALGATCAGGKVCLVGMGHHEMTVPLTPAAV--REVDVVGVFRYKNTWP 317
            +  G+ KT+  A+     GG V + G+   +  V ++P  +  +E+ ++G F    T+P
Sbjct: 231 IEATGVPKTLEQAIEYARRGGTVLVFGVYAPDARVSISPFEIFQKELTIIGSFINPYTFP 290

Query: 318 LCLELLRSGKIDVKPLVTHRFGFSQKEVEEAFETSARGGTAIKVMFN 364
             + LL SGKIDVK LV+HR      EV EA E   R G A+KV+  
Sbjct: 291 RAIALLESGKIDVKGLVSHRLPLE--EVPEALE-GMRSGGALKVVVV 334

L-threonine dehydrogenase (TDH) catalyzes the zinc-dependent formation of 2-amino-3-ketobutyrate from L-threonine, via NAD(H)-dependent oxidation. THD is a member of the zinc-requiring, medium chain NAD(H)-dependent alcohol dehydrogenase family (MDR). MDRs have a NAD(P)(H)-binding domain in a Rossmann fold of a beta-alpha form. NAD(P)(H)-dependent oxidoreductases are the major enzymes in the interconversion of alcohols and aldehydes, or ketones. The N-terminal region typically has an all-beta catalytic domain. These proteins typically form dimers (typically higher plants, mammals) or tetramers (yeast, bacteria), and have 2 tightly bound zinc atoms per subunit. Sorbitol and aldose reductase are NAD(+) binding proteins of the polyol pathway, which interconverts glucose and fructose. Length = 334

>gnl|CDD|176197 cd08235, iditol_2_DH_like, L-iditol 2-dehydrogenase

 Score =  253 bits (648), Expect = 4e-82
 Identities = 132/357 (36%), Positives = 196/357 (54%), Gaps = 32/357 (8%)

Query: 20  AAWLLGVNTLKIQPFELPSLGPYDVLVRMKAVGICGSDVHYLKTLRCADFVVKEPMVIGH 79
           AA L G N ++++   +P  GP +VLV+++A GICG+DV   K +R     +K P ++GH
Sbjct: 3   AAVLHGPNDVRLEEVPVPEPGPGEVLVKVRACGICGTDV---KKIRGGHTDLKPPRILGH 59

Query: 80  ECAGVIEKVGSEVKTLVPGDRVALEPGISCWRCDHCKGGRYNLCPEMK--FFATPPVHGS 137
           E AG I +VG  V     GDRV + P + C  C +C  G  N+CP  K          G 
Sbjct: 60  EIAGEIVEVGDGVTGFKVGDRVFVAPHVPCGECHYCLRGNENMCPNYKKFGNLYD---GG 116

Query: 138 LANQVVHPA-----DLCFKLPDNVSLEEGAMCEPLSVGLHACRRANIGPETNVLIMGAGP 192
            A  V  PA         KLPDNVS EE A+ EPL+  ++A R+A I P   VL++GAGP
Sbjct: 117 FAEYVRVPAWAVKRGGVLKLPDNVSFEEAALVEPLACCINAQRKAGIKPGDTVLVIGAGP 176

Query: 193 IGLVTMLGAPRAFGAPRIVIVDVDDYRLSVAKEIGADNIVKVSTNLQDIAEEVEKIQKAM 252
           IGL+  + A +A GA ++++ D++++RL  AK++GAD  +  +   +D+ E+V ++    
Sbjct: 177 IGLLHAMLA-KASGARKVIVSDLNEFRLEFAKKLGADYTIDAAE--EDLVEKVRELTD-- 231

Query: 253 GTGIDVSFDCAGLNKTMSTALGATCAGGKVCLVGMGHHEMTVPLTPAAV--REVDVVGVF 310
           G G DV     G  +  + AL     GG++   G      TV + P  +  RE+ + G +
Sbjct: 232 GRGADVVIVATGSPEAQAQALELVRKGGRILFFGGLPKGSTVNIDPNLIHYREITITGSY 291

Query: 311 R-----YKNTWPLCLELLRSGKIDVKPLVTHRFGFSQKEVEEAFETSARGGTAIKVM 362
                 YK      LEL+ SGKIDVK L+THRF    +++EEAFE  A  G ++K++
Sbjct: 292 AASPEDYKEA----LELIASGKIDVKDLITHRFPL--EDIEEAFEL-AADGKSLKIV 341

Putative L-iditol 2-dehydrogenase based on annotation of some members in this subgroup. L-iditol 2-dehydrogenase catalyzes the NAD+-dependent conversion of L-iditol to L-sorbose in fructose and mannose metabolism. This enzyme is related to sorbitol dehydrogenase, alcohol dehydrogenase, and other medium chain dehydrogenase/reductases. The zinc-dependent alcohol dehydrogenase (ADH-Zn)-like family of proteins is a diverse group of proteins related to the first identified member, class I mammalian ADH. This group is also called the medium chain dehydrogenases/reductase family (MDR) to highlight its broad range of activities and to distinguish from the smaller short chain dehydrogenases (~ 250 amino acids vs. the ~ 350 amino acids of the MDR). The MDR proteins have 2 domains: a C-terminal NAD(P) binding-Rossmann fold domain of a beta-alpha form and an N-terminal GroES-like catalytic domain. The MDR group contains a host of activities, including the founding alcohol dehydrogenase (ADH), quinone reductase, sorbitol dehydrogenase, formaldehyde dehydrogenase, butanediol DH, ketose reductase, cinnamyl reductase, and numerous others. The zinc-dependent alcohol dehydrogenases (ADHs) catalyze the NAD(P)(H)-dependent interconversion of alcohols to aldehydes or ketones. Active site zinc has a catalytic role, while structural zinc aids in stability. ADH-like proteins typically form dimers (typically higher plants, mammals) or tetramers (yeast, bacteria), and generally have 2 tightly bound zinc atoms per subunit. The active site zinc is coordinated by a histidine, two cysteines, and a water molecule. The second zinc seems to play a structural role, affects subunit interactions, and is typically coordinated by 4 cysteines. Length = 343

>gnl|CDD|176195 cd08233, butanediol_DH_like, (2R,3R)-2,3-butanediol dehydrogenase

 Score =  248 bits (637), Expect = 2e-80
 Identities = 128/358 (35%), Positives = 186/358 (51%), Gaps = 28/358 (7%)

Query: 20  AAWLLGVNTLKIQPFELPSLGPYDVLVRMKAVGICGSDVH-YLKTLRCAD---FVVKE-- 73
           AA   G   ++++    P + P +V +++   GICGSD+H YL      D   F+  E  
Sbjct: 3   AARYHGRKDIRVEEVPEPPVKPGEVKIKVAWCGICGSDLHEYL------DGPIFIPTEGH 56

Query: 74  --------PMVIGHECAGVIEKVGSEVKTLVPGDRVALEPGISCWRCDHCKGGRYNLCPE 125
                   P+ +GHE +GV+ +VGS V     GDRV +EP I C  C  CK G YNLC  
Sbjct: 57  PHLTGETAPVTLGHEFSGVVVEVGSGVTGFKVGDRVVVEPTIKCGTCGACKRGLYNLCDS 116

Query: 126 MKFFATPPVHGSLANQVVHPADLCFKLPDNVSLEEGAMCEPLSVGLHACRRANIGPETNV 185
           + F       G  A  VV PA    KLPDNV LEE A+ EPL+V  HA RR+   P    
Sbjct: 117 LGFIGLGGGGGGFAEYVVVPAYHVHKLPDNVPLEEAALVEPLAVAWHAVRRSGFKPGDTA 176

Query: 186 LIMGAGPIGLVTMLGAPRAFGAPRIVIVDVDDYRLSVAKEIGADNIVKVSTNLQDIAEEV 245
           L++GAGPIGL+T+L   +A GA +I++ +  + R  +A+E+GA  ++  +    D+  EV
Sbjct: 177 LVLGAGPIGLLTILAL-KAAGASKIIVSEPSEARRELAEELGATIVLDPTE--VDVVAEV 233

Query: 246 EKIQKAMGTGIDVSFDCAGLNKTMSTALGATCAGGKVCLVGMGHHEMTVPLTPAAVREVD 305
            K+    G G+DVSFDCAG+  T+ TA+ A    G    V +    ++       ++E  
Sbjct: 234 RKLTG--GGGVDVSFDCAGVQATLDTAIDALRPRGTAVNVAIWEKPISFNPNDLVLKEKT 291

Query: 306 VVGVFRY-KNTWPLCLELLRSGKIDVKPLVTHRFGFSQKEVEEAFETSARG-GTAIKV 361
           + G   Y +  +   ++LL SGKID +PL+T R       VE+ FE         +K+
Sbjct: 292 LTGSICYTREDFEEVIDLLASGKIDAEPLITSRIPLEDI-VEKGFEELINDKEQHVKI 348

(2R,3R)-2,3-butanediol dehydrogenase, a zinc-dependent medium chain alcohol dehydrogenase, catalyzes the NAD(+)-dependent oxidation of (2R,3R)-2,3-butanediol and meso-butanediol to acetoin. BDH functions as a homodimer. NAD(P)(H)-dependent oxidoreductases are the major enzymes in the interconversion of alcohols and aldehydes, or ketones. The medium chain alcohol dehydrogenase family (MDR) have a NAD(P)(H)-binding domain in a Rossmann fold of a beta-alpha form. The N-terminal region typically has an all-beta catalytic domain. These proteins typically form dimers (typically higher plants, mammals) or tetramers (yeast, bacteria), and have 2 tightly bound zinc atoms per subunit. Sorbitol and aldose reductase are NAD(+) binding proteins of the polyol pathway, which interconverts glucose and fructose. Sorbitol dehydrogenase is tetrameric and has a single catalytic zinc per subunit. Length = 351

>gnl|CDD|176222 cd08261, Zn_ADH7, Alcohol dehydrogenases of the MDR family

 Score =  234 bits (599), Expect = 9e-75
 Identities = 128/341 (37%), Positives = 189/341 (55%), Gaps = 19/341 (5%)

Query: 26  VNTLKIQPFELPSLGPYDVLVRMKAVGICGSDVHYLKTLRCADFVVKEPMVIGHECAGVI 85
              L++     P  G  +VLVR+K VGICGSD+H        +     P ++GHE +G +
Sbjct: 9   PGRLEVVDIPEPVPGAGEVLVRVKRVGICGSDLH---IYHGRNPFASYPRILGHELSGEV 65

Query: 86  EKVGSEVKTLVPGDRVALEPGISCWRCDHCKGGRYNLCPEMKFFATPPVH--GSLANQVV 143
            +VG  V  L  GDRV ++P ISC  C  C+ GR N C  ++      VH  G  A  +V
Sbjct: 66  VEVGEGVAGLKVGDRVVVDPYISCGECYACRKGRPNCCENLQVLG---VHRDGGFAEYIV 122

Query: 144 HPADLCFKLPDNVSLEEGAMCEPLSVGLHACRRANIGPETNVLIMGAGPIGLVTMLGAPR 203
            PAD    +P+ +SL++ A+ EPL++G HA RRA +     VL++GAGPIGL  +  A +
Sbjct: 123 VPAD-ALLVPEGLSLDQAALVEPLAIGAHAVRRAGVTAGDTVLVVGAGPIGLGVIQVA-K 180

Query: 204 AFGAPRIVIVDVDDYRLSVAKEIGADNIVKVSTNLQDIAEEVEKIQKAMGTGIDVSFDCA 263
           A GA R+++VD+DD RL  A+E+GAD+ + V    +D+A  + ++    G G DV  D  
Sbjct: 181 ARGA-RVIVVDIDDERLEFARELGADDTINVGD--EDVAARLREL--TDGEGADVVIDAT 235

Query: 264 GLNKTMSTALGATCAGGKVCLVGMGHHEMTVPLTPAAVREVDVVGVFRYKNT-WPLCLEL 322
           G   +M  A+     GG+V LVG+    +T P      +E+ ++G        +P  ++L
Sbjct: 236 GNPASMEEAVELVAHGGRVVLVGLSKGPVTFPDPEFHKKELTILGSRNATREDFPDVIDL 295

Query: 323 LRSGKIDVKPLVTHRFGFSQKEVEEAFET-SARGGTAIKVM 362
           L SGK+D + L+THRF F   +V EAF+   A  G  IKV+
Sbjct: 296 LESGKVDPEALITHRFPFE--DVPEAFDLWEAPPGGVIKVL 334

This group contains members identified as related to zinc-dependent alcohol dehydrogenase and other members of the MDR family. The medium chain dehydrogenases/reductase (MDR)/zinc-dependent alcohol dehydrogenase-like family, which contains the zinc-dependent alcohol dehydrogenase (ADH-Zn) and related proteins, is a diverse group of proteins related to the first identified member, class I mammalian ADH. MDRs display a broad range of activities and are distinguished from the smaller short chain dehydrogenases (~ 250 amino acids vs. the ~ 350 amino acids of the MDR). The MDR proteins have 2 domains: a C-terminal NAD(P)-binding Rossmann fold domain of a beta-alpha form and an N-terminal catalytic domain with distant homology to GroES. The MDR group includes various activities, including the founding alcohol dehydrogenase (ADH), quinone reductase, sorbitol dehydrogenase, formaldehyde dehydrogenase, butanediol DH, ketose reductase, cinnamyl reductase, and numerous others. The zinc-dependent alcohol dehydrogenases (ADHs) catalyze the NAD(P)(H)-dependent interconversion of alcohols to aldehydes or ketones. Active site zinc has a catalytic role, while structural zinc aids in stability. ADH-like proteins typically form dimers (typically higher plants, mammals) or tetramers (yeast, bacteria), and generally have 2 tightly bound zinc atoms per subunit. The active site zinc is coordinated by a histidine, two cysteines, and a water molecule. The second zinc seems to play a structural role, affects subunit interactions, and is typically coordinated by 4 cysteines. Length = 337

>gnl|CDD|176178 cd05188, MDR, Medium chain reductase/dehydrogenase (MDR)/zinc-dependent alcohol dehydrogenase-like family

 Score =  208 bits (531), Expect = 2e-65
 Identities = 94/285 (32%), Positives = 146/285 (51%), Gaps = 18/285 (6%)

Query: 43  DVLVRMKAVGICGSDVHYLKTLRCADFVVKEPMVIGHECAGVIEKVGSEVKTLVPGDRVA 102
           +VLVR++A G+CG+D+H  +         K P+++GHE AGV+ +VG  V  +  GDRV 
Sbjct: 1   EVLVRVEAAGLCGTDLHIRRGGY--PPPPKLPLILGHEGAGVVVEVGPGVTGVKVGDRVV 58

Query: 103 LEPGISCWRCDHCKGGRYNLCPEMKFFATPPVHGSLANQVVHPADLCFKLPDNVSLEEGA 162
           + P + C  C+ C+                 + G  A  VV PAD    LPD +SLEE A
Sbjct: 59  VLPNLGCGTCELCRE-----LCPGGGILGEGLDGGFAEYVVVPADNLVPLPDGLSLEEAA 113

Query: 163 M-CEPLSVGLHACRRAN-IGPETNVLIMGAGPIGLVTMLGAPRAFGAPRIVIVDVDDYRL 220
           +  EPL+   HA RRA  + P   VL++GAG +GL+    A +A GA R+++ D  D +L
Sbjct: 114 LLPEPLATAYHALRRAGVLKPGDTVLVLGAGGVGLLAAQLA-KAAGA-RVIVTDRSDEKL 171

Query: 221 SVAKEIGADNIVKVSTNLQDIAEEVEKIQKAMGTGIDVSFDCAGLNKTMSTALGATCAGG 280
            +AKE+GAD+++             E+++   G G DV  D  G  +T++ AL     GG
Sbjct: 172 ELAKELGADHVIDYKEED-----LEEELRLTGGGGADVVIDAVGGPETLAQALRLLRPGG 226

Query: 281 KVCLVG-MGHHEMTVPLTPAAVREVDVVGVFRY-KNTWPLCLELL 323
           ++ +VG          L     +E+ ++G     +  +   L+LL
Sbjct: 227 RIVVVGGTSGGPPLDDLRRLLFKELTIIGSTGGTREDFEEALDLL 271

The medium chain reductase/dehydrogenases (MDR)/zinc-dependent alcohol dehydrogenase-like family, which contains the zinc-dependent alcohol dehydrogenase (ADH-Zn) and related proteins, is a diverse group of proteins related to the first identified member, class I mammalian ADH. MDRs display a broad range of activities and are distinguished from the smaller short chain dehydrogenases (~ 250 amino acids vs. the ~ 350 amino acids of the MDR). The MDR proteins have 2 domains: a C-terminal NAD(P) binding-Rossmann fold domain of a beta-alpha form and an N-terminal catalytic domain with distant homology to GroES. The MDR group contains a host of activities, including the founding alcohol dehydrogenase (ADH) , quinone reductase, sorbitol dehydrogenase, formaldehyde dehydrogenase, butanediol DH, ketose reductase, cinnamyl reductase, and numerous others. The zinc-dependent alcohol dehydrogenases (ADHs) catalyze the NAD(P)(H)-dependent interconversion of alcohols to aldehydes or ketones. ADH-like proteins typically form dimers (typically higher plants, mammals) or tetramers (yeast, bacteria), and generally have 2 tightly bound zinc atoms per subunit, a catalytic zinc at the active site and a structural zinc in a lobe of the catalytic domain. The active site zinc is coordinated by a histidine, two cysteines, and a water molecule. The second zinc seems to play a structural role, affects subunit interactions, and is typically coordinated by 4 cysteines. Other MDR members have only a catalytic zinc, and some contain no coordinated zinc. Length = 271

>gnl|CDD|176219 cd08258, Zn_ADH4, Alcohol dehydrogenases of the MDR family

 Score =  201 bits (513), Expect = 2e-62
 Identities = 110/304 (36%), Positives = 161/304 (52%), Gaps = 19/304 (6%)

Query: 30  KIQPFELPSLGPYDVLVRMKAVGICGSDVHYLKTLRCADFVVKEPMVIGHECAGVIEKVG 89
           +++    P  GP +VL+++ A GICGSD+H     +     V+ P+V+GHE +G I +VG
Sbjct: 15  ELREVPEPEPGPGEVLIKVAAAGICGSDLH---IYKGDYDPVETPVVLGHEFSGTIVEVG 71

Query: 90  SEVKTLVPGDRVALEP-GISCWRCDHCKGGRYNLCPEMKFFATPPVHGSLANQVVHPADL 148
            +V+    GDRV  E    +C RC +C+ G YNLCP  K   T    G  A  V+ P + 
Sbjct: 72  PDVEGWKVGDRVVSETTFSTCGRCPYCRRGDYNLCPHRKGIGTQ-ADGGFAEYVLVPEES 130

Query: 149 CFKLPDNVSLEEGAMCEPLSVGLHAC-RRANIGPETNVLIMGAGPIGLVTMLGAPRAFGA 207
             +LP+N+SLE  A+ EPL+V +HA   R+ I P   V++ G GPIGL+    A +  GA
Sbjct: 131 LHELPENLSLEAAALTEPLAVAVHAVAERSGIRPGDTVVVFGPGPIGLLAAQVA-KLQGA 189

Query: 208 PRIVIVDV--DDYRLSVAKEIGADNIVKVSTNLQDIAEEVEKIQKAMGTGIDVSFDCAGL 265
             +V+V    D+ RL VAKE+GAD    V+   +D+AE V +I    G G DV  +C+G 
Sbjct: 190 -TVVVVGTEKDEVRLDVAKELGAD---AVNGGEEDLAELVNEITD--GDGADVVIECSGA 243

Query: 266 NKTMSTALGATCAGGKVCLVGMGHHEMTVPLTPAAV--REVDVVGVFRYKNT-WPLCLEL 322
              +  AL     GG++  VG+        +    +  +E+ V+G        W   L L
Sbjct: 244 VPALEQALELLRKGGRIVQVGIFGPLA-ASIDVERIIQKELSVIGSRSSTPASWETALRL 302

Query: 323 LRSG 326
           L SG
Sbjct: 303 LASG 306

This group shares the zinc coordination sites of the zinc-dependent alcohol dehydrogenases. The medium chain dehydrogenases/reductase (MDR)/zinc-dependent alcohol dehydrogenase-like family, which contains the zinc-dependent alcohol dehydrogenase (ADH-Zn) and related proteins, is a diverse group of proteins related to the first identified member, class I mammalian ADH. MDRs display a broad range of activities and are distinguished from the smaller short chain dehydrogenases (~ 250 amino acids vs. the ~ 350 amino acids of the MDR). The MDR proteins have 2 domains: a C-terminal NAD(P)-binding Rossmann fold domain of an beta-alpha form and an N-terminal catalytic domain with distant homology to GroES. The MDR group contains a host of activities, including the founding alcohol dehydrogenase (ADH), quinone reductase, sorbitol dehydrogenase, formaldehyde dehydrogenase, butanediol DH, ketose reductase, cinnamyl reductase, and numerous others. The zinc-dependent alcohol dehydrogenases (ADHs) catalyze the NAD(P)(H)-dependent interconversion of alcohols to aldehydes or ketones. Active site zinc has a catalytic role, while structural zinc aids in stability. ADH-like proteins typically form dimers (typically higher plants, mammals) or tetramers (yeast, bacteria), and generally have 2 tightly bound zinc atoms per subunit. The active site zinc is coordinated by a histidine, two cysteines, and a water molecule. The second zinc seems to play a structural role, affects subunit interactions, and is typically coordinated by 4 cysteines. Length = 306

>gnl|CDD|180054 PRK05396, tdh, L-threonine 3-dehydrogenase; Validated

 Score =  200 bits (510), Expect = 2e-61
 Identities = 107/332 (32%), Positives = 175/332 (52%), Gaps = 17/332 (5%)

Query: 37  PSLGPYDVLVRMKAVGICGSDVHYLKTLRCADFVVKEPMVIGHECAGVIEKVGSEVKTLV 96
           P  GP DVL+++K   ICG+DVH       A   +  PMV+GHE  G + +VGSEV    
Sbjct: 21  PEPGPNDVLIKVKKTAICGTDVHIYNWDEWAQKTIPVPMVVGHEFVGEVVEVGSEVTGFK 80

Query: 97  PGDRVALEPGISCWRCDHCKGGRYNLCPEMKFFATPPVH--GSLANQVVHPADLCFKLPD 154
            GDRV+ E  I C  C +C+ GR +LC   K      V+  G+ A  +V PA   +K+PD
Sbjct: 81  VGDRVSGEGHIVCGHCRNCRAGRRHLCRNTKGVG---VNRPGAFAEYLVIPAFNVWKIPD 137

Query: 155 NVSLEEGAMCEPLSVGLHACRRANIGPETNVLIMGAGPIGLVTMLGAPRAFGAPRIVIVD 214
           ++  +  A+ +P    +H     ++  E  VLI GAGPIG++    A +  GA  +VI D
Sbjct: 138 DIPDDLAAIFDPFGNAVHTALSFDLVGED-VLITGAGPIGIMAAAVA-KHVGARHVVITD 195

Query: 215 VDDYRLSVAKEIGADNIVKVSTNLQDIAEEVEKIQKAMGTGIDVSFDCAGLNKTMSTALG 274
           V++YRL +A+++GA   V V+   +D+ + + ++   M  G DV  + +G        L 
Sbjct: 196 VNEYRLELARKMGATRAVNVAK--EDLRDVMAEL--GMTEGFDVGLEMSGAPSAFRQMLD 251

Query: 275 ATCAGGKVCLVGMGHHEMTVPLTPAAVREVDVVGVFRYK--NTWPLCLELLRSGKIDVKP 332
               GG++ ++G+   +M +       + + + G++  +   TW     LL+SG +D+ P
Sbjct: 252 NMNHGGRIAMLGIPPGDMAIDWNKVIFKGLTIKGIYGREMFETWYKMSALLQSG-LDLSP 310

Query: 333 LVTHRFGFSQKEVEEAFETSARGGTAIKVMFN 364
           ++THRF     + ++ FE   R G + KV+ +
Sbjct: 311 IITHRFPI--DDFQKGFEA-MRSGQSGKVILD 339

Length = 341

>gnl|CDD|176184 cd05281, TDH, Threonine dehydrogenase

 Score =  198 bits (507), Expect = 5e-61
 Identities = 108/342 (31%), Positives = 176/342 (51%), Gaps = 18/342 (5%)

Query: 29  LKIQPFELPSLGPYDVLVRMKAVGICGSDVHYLKTLRCADFVVKEPMVIGHECAGVIEKV 88
            ++    +P  GP +VL+++ A  ICG+DVH  +    A   +K P++ GHE AG + +V
Sbjct: 13  AELVEVPVPKPGPGEVLIKVLAASICGTDVHIYEWDEWAQSRIKPPLIFGHEFAGEVVEV 72

Query: 89  GSEVKTLVPGDRVALEPGISCWRCDHCKGGRYNLCPEMKFFATPPVH--GSLANQVVHPA 146
           G  V  +  GD V+ E  I C +C  C+ G Y++C   K      V   G  A  VV P 
Sbjct: 73  GEGVTRVKVGDYVSAETHIVCGKCYQCRTGNYHVCQNTKILG---VDTDGCFAEYVVVPE 129

Query: 147 DLCFKLPDNVSLEEGAMCEPLSVGLHACRRANIGPETNVLIMGAGPIGLVTMLGAPRAFG 206
           +  +K   ++  E  ++ EPL   +H     ++    +VLI G GPIGL+  +   +A G
Sbjct: 130 ENLWKNDKDIPPEIASIQEPLGNAVHTVLAGDV-SGKSVLITGCGPIGLMA-IAVAKAAG 187

Query: 207 APRIVIVDVDDYRLSVAKEIGADNIVKVSTNLQDIAEEVEKIQKAMGTGIDVSFDCAGLN 266
           A  ++  D + YRL +AK++GAD ++      +D+  EV+ +    GTG+DV  + +G  
Sbjct: 188 ASLVIASDPNPYRLELAKKMGADVVINPRE--EDVV-EVKSVTD--GTGVDVVLEMSGNP 242

Query: 267 KTMSTALGATCAGGKVCLVGMGHHEMTVPLTPAAV-REVDVVGVFRYK--NTWPLCLELL 323
           K +   L A   GG+V ++G+    + + L    + + + V G+   K   TW     LL
Sbjct: 243 KAIEQGLKALTPGGRVSILGLPPGPVDIDLNNLVIFKGLTVQGITGRKMFETWYQVSALL 302

Query: 324 RSGKIDVKPLVTHRFGFSQKEVEEAFETSARGGTAIKVMFNL 365
           +SGK+D+ P++TH+     ++ EEAFE   R G   KV+   
Sbjct: 303 KSGKVDLSPVITHKLPL--EDFEEAFEL-MRSGKCGKVVLYP 341

L-threonine dehydrogenase (TDH) catalyzes the zinc-dependent formation of 2-amino-3-ketobutyrate from L-threonine via NAD(H)- dependent oxidation. THD is a member of the zinc-requiring, medium chain NAD(H)-dependent alcohol dehydrogenase family (MDR). MDRs have a NAD(P)(H)-binding domain in a Rossmann fold of a beta-alpha form. NAD(P)(H)-dependent oxidoreductases are the major enzymes in the interconversion of alcohols and aldehydes, or ketones. The N-terminal region typically has an all-beta catalytic domain. These proteins typically form dimers (typically higher plants, mammals) or tetramers (yeast, bacteria) and have 2 tightly bound zinc atoms per subunit. Sorbitol and aldose reductase are NAD(+) binding proteins of the polyol pathway, which interconverts glucose and fructose. Length = 341

>gnl|CDD|129775 TIGR00692, tdh, L-threonine 3-dehydrogenase

 Score =  196 bits (500), Expect = 5e-60
 Identities = 115/360 (31%), Positives = 184/360 (51%), Gaps = 28/360 (7%)

Query: 11  KEDGEEVNMAAWLLGVNTLKIQPFELPSLGPYDVLVRMKAVGICGSDVHYLKTLRCADFV 70
           K         A L  V         +P  GP +VL+++ A  ICG+DVH       A   
Sbjct: 4   KTKPGY---GAELTEV--------PVPEPGPGEVLIKVLATSICGTDVHIYNWDEWAQSR 52

Query: 71  VKEPMVIGHECAGVIEKVGSEVKTLVPGDRVALEPGISCWRCDHCKGGRYNLCPEMKFFA 130
           +K P V+GHE AG +  +G  V+ +  GD V++E  I C +C  C+ G+Y++C   K F 
Sbjct: 53  IKPPQVVGHEVAGEVVGIGPGVEGIKVGDYVSVETHIVCGKCYACRRGQYHVCQNTKIFG 112

Query: 131 --TPPVHGSLANQVVHPADLCFKLPDNVSLEEGAMCEPLSVGLHACRRANIGPETNVLIM 188
             T    G  A   V PA   +K P ++  E   + EPL   +H      I  ++ VL+ 
Sbjct: 113 VDTD---GCFAEYAVVPAQNIWKNPKSIPPEYATIQEPLGNAVHTVLAGPISGKS-VLVT 168

Query: 189 GAGPIGLVTMLGAPRAFGAPRIVIVDVDDYRLSVAKEIGADNIVKVSTNLQDIAEEVEKI 248
           GAGPIGL+ +  A +A GA  +++ D ++YRL +AK++GA  +V      +D+ +EV  +
Sbjct: 169 GAGPIGLMAIAVA-KASGAYPVIVSDPNEYRLELAKKMGATYVVNPFK--EDVVKEVADL 225

Query: 249 QKAMGTGIDVSFDCAGLNKTMSTALGATCAGGKVCLVGMGHHEMTVPLTPAAV-REVDVV 307
               G G+DV  + +G  K +   L A   GG+V L+G+   ++T+  T   + + + + 
Sbjct: 226 --TDGEGVDVFLEMSGAPKALEQGLQAVTPGGRVSLLGLPPGKVTIDFTNKVIFKGLTIY 283

Query: 308 GVFRYK--NTWPLCLELLRSGKIDVKPLVTHRFGFSQKEVEEAFETSARGGTAIKVMFNL 365
           G+       TW     L++SGK+D+ P++TH+F F   + E+ FE   R G   KV+ +L
Sbjct: 284 GITGRHMFETWYTVSRLIQSGKLDLDPIITHKFKF--DKFEKGFE-LMRSGQTGKVILSL 340

This protein is a tetrameric, zinc-binding, NAD-dependent enzyme of threonine catabolism. Closely related proteins include sorbitol dehydrogenase, xylitol dehydrogenase, and benzyl alcohol dehydrogenase. Eukaryotic examples of this enzyme have been demonstrated experimentally but do not appear in database search results.E. coli His-90 modulates substrate specificity and is believed part of the active site [Energy metabolism, Amino acids and amines]. Length = 340

>gnl|CDD|176201 cd08239, THR_DH_like, L-threonine dehydrogenase (TDH)-like

 Score =  195 bits (498), Expect = 9e-60
 Identities = 114/355 (32%), Positives = 177/355 (49%), Gaps = 27/355 (7%)

Query: 20  AAWLLGVNTLKIQPFELPSLGPYDVLVRMKAVGICGSDVHYLKTLRCADFVVKEPMVIGH 79
            A   G  T++++ F +P  GP +VL+R+KA G+CGSD+HY            + ++ GH
Sbjct: 3   GAVFPGDRTVELREFPVPVPGPGEVLLRVKASGLCGSDLHYY--YHGHRAPAYQGVIPGH 60

Query: 80  ECAGVIEKVGSEVKTLVPGDRVALEPGISCWRCDHCKGGRYNLCPEMKFFATPPVHGSLA 139
           E AGV+  VG  V     GDRV +   + C  C +C+ G   LC   +        G  A
Sbjct: 61  EPAGVVVAVGPGVTHFRVGDRVMVYHYVGCGACRNCRRGWMQLCTSKRAAYGWNRDGGHA 120

Query: 140 NQVVHPADLCFKLPDNVSLEEGAMCEPLSVGL----HACRRANIGPETNVLIMGAGPIGL 195
             ++ P      LPD++S  +GA+   L  G+    HA RR  +     VL++GAGP+GL
Sbjct: 121 EYMLVPEKTLIPLPDDLSFADGAL---LLCGIGTAYHALRRVGVSGRDTVLVVGAGPVGL 177

Query: 196 VTMLGAPRAFGAPRIVIVDVDDYRLSVAKEIGADNIVKVSTNLQDIAEEVEKIQKAMGTG 255
             ++ A RA GA  ++ VD    RL +AK +GAD ++      QD  +E+ ++    G G
Sbjct: 178 GALMLA-RALGAEDVIGVDPSPERLELAKALGADFVINS---GQDDVQEIRELTS--GAG 231

Query: 256 IDVSFDCAGLNKTMSTALGATCAGGKVCLVGMGHHEMTVPLTPAAV---REVDVVGVFRY 312
            DV+ +C+G       AL A    G++ LVG G     + +  +     ++  ++G + Y
Sbjct: 232 ADVAIECSGNTAARRLALEAVRPWGRLVLVGEGG---ELTIEVSNDLIRKQRTLIGSW-Y 287

Query: 313 KNTWPL--CLELLRSGKIDVKPLVTHRFGFSQKEVEEAFETSARGGTAIKVMFNL 365
            +   +  C E L   K++V  LVTHRFG  Q    EA+   A+G +  KV+F  
Sbjct: 288 FSVPDMEECAEFLARHKLEVDRLVTHRFGLDQ--APEAYALFAQGES-GKVVFVF 339

MDR/AHD-like proteins, including a protein annotated as a threonine dehydrogenase. L-threonine dehydrogenase (TDH) catalyzes the zinc-dependent formation of 2-amino-3-ketobutyrate from L-threonine via NAD(H)-dependent oxidation. The zinc-dependent alcohol dehydrogenases (ADHs) catalyze the NAD(P)(H)-dependent interconversion of alcohols to aldehydes or ketones. Zinc-dependent ADHs are medium chain dehydrogenase/reductase type proteins (MDRs) and have a NAD(P)(H)-binding domain in a Rossmann fold of an beta-alpha form. The N-terminal region typically has an all-beta catalytic domain. In addition to alcohol dehydrogenases, this group includes quinone reductase, sorbitol dehydrogenase, formaldehyde dehydrogenase, butanediol DH, ketose reductase, cinnamyl reductase, and numerous others. These proteins typically form dimers (typically higher plants, mammals) or tetramers (yeast, bacteria), and generally have 2 tightly bound zinc atoms per subunit. The active site zinc is coordinated by a histidine, two cysteines, and a water molecule. The second zinc seems to play a structural role, affects subunit interactions, and is typically coordinated by 4 cysteines. Length = 339

>gnl|CDD|176181 cd05278, FDH_like, Formaldehyde dehydrogenases

 Score =  195 bits (499), Expect = 9e-60
 Identities = 114/353 (32%), Positives = 169/353 (47%), Gaps = 23/353 (6%)

Query: 20  AAWLLGVNTLKIQPFELPSL-GPYDVLVRMKAVGICGSDVHYLKTLRCADFVVKEPMVIG 78
           A   LG   + ++    P + GP+D +VR+ A  ICGSD+H     R      K  M++G
Sbjct: 3   ALVYLGPGKIGLEEVPDPKIQGPHDAIVRVTATSICGSDLH---IYRGGVPGAKHGMILG 59

Query: 79  HECAGVIEKVGSEVKTLVPGDRVALEPGISCWRCDHCKGGRYNLC----PEMKFFATPPV 134
           HE  G + +VGS+VK L PGDRV++     C RC  C+ G +  C       K       
Sbjct: 60  HEFVGEVVEVGSDVKRLKPGDRVSVPCITFCGRCRFCRRGYHAHCENGLWGWKLGNRID- 118

Query: 135 HGSLANQVVHP-ADL-CFKLPDNVSLEEGAMC-EPLSVGLHACRRANIGPETNVLIMGAG 191
            G  A  V  P AD+   K+PD +  E+  M  + L  G H    A I P + V ++GAG
Sbjct: 119 -GGQAEYVRVPYADMNLAKIPDGLPDEDALMLSDILPTGFHGAELAGIKPGSTVAVIGAG 177

Query: 192 PIGLVTMLGAPRAFGAPRIVIVDVDDYRLSVAKEIGADNIVKVSTNLQDIAEEVEKIQKA 251
           P+GL  + GA R  GA RI+ VD +  RL +AKE GA +I  ++    DI E++ ++   
Sbjct: 178 PVGLCAVAGA-RLLGAARIIAVDSNPERLDLAKEAGATDI--INPKNGDIVEQILELTG- 233

Query: 252 MGTGIDVSFDCAGLNKTMSTALGATCAGGKVCLVGM-GHHEMTVPLTPAAVREVDV-VGV 309
            G G+D   +  G  +T   A+     GG +  VG+ G  +    L     + +    G+
Sbjct: 234 -GRGVDCVIEAVGFEETFEQAVKVVRPGGTIANVGVYGKPDPLPLLGEWFGKNLTFKTGL 292

Query: 310 FRYKNTWPLCLELLRSGKIDVKPLVTHRFGFSQKEVEEAFET-SARGGTAIKV 361
              +   P  L+L+  GKID   L+THRF      + +A+     +    IKV
Sbjct: 293 VPVRARMPELLDLIEEGKIDPSKLITHRFPLDD--ILKAYRLFDNKPDGCIKV 343

Formaldehyde dehydrogenase (FDH) is a member of the zinc-dependent/medium chain alcohol dehydrogenase family. Formaldehyde dehydrogenase (aka ADH3) may be the ancestral form of alcohol dehydrogenase, which evolved to detoxify formaldehyde. This CD contains glutathione dependant FDH, glutathione independent FDH, and related alcohol dehydrogenases. FDH converts formaldehyde and NAD(P) to formate and NAD(P)H. The initial step in this process the spontaneous formation of a S-(hydroxymethyl)glutathione adduct from formaldehyde and glutathione, followed by FDH-mediated oxidation (and detoxification) of the adduct to S-formylglutathione. Unlike typical FDH, Pseudomonas putida aldehyde-dismutating FDH (PFDH) is glutathione-independent. The medium chain alcohol dehydrogenase family (MDR) have a NAD(P)(H)-binding domain in a Rossmann fold of a beta-alpha form. The N-terminal region typically has an all-beta catalytic domain. These proteins typically form dimers (typically higher plants, mammals) or tetramers (yeast, bacteria), and have 2 tightly bound zinc atoms per subunit. Length = 347

>gnl|CDD|176216 cd08254, hydroxyacyl_CoA_DH, 6-hydroxycyclohex-1-ene-1-carboxyl-CoA dehydrogenase, N-benzyl-3-pyrrolidinol dehydrogenase, and other MDR family members

 Score =  189 bits (482), Expect = 3e-57
 Identities = 114/353 (32%), Positives = 171/353 (48%), Gaps = 23/353 (6%)

Query: 19  MAAWLL---GVNTLKIQPFELPSLGPYDVLVRMKAVGICGSDVHYL-KTLRCADFVVKEP 74
           M AW         L ++   +P  GP +VLV++KA G+C SD+H L   +     + K P
Sbjct: 1   MKAWRFHKGSKGLLVLEEVPVPEPGPGEVLVKVKAAGVCHSDLHILDGGVP---TLTKLP 57

Query: 75  MVIGHECAGVIEKVGSEVKTLVPGDRVALEPGISCWRCDHCKGGRYNLCPEMKFFATPPV 134
           + +GHE AG + +VG+ V     GDRVA+   I C  C  C+ GR NLC          +
Sbjct: 58  LTLGHEIAGTVVEVGAGVTNFKVGDRVAVPAVIPCGACALCRRGRGNLCLNQGMPGL-GI 116

Query: 135 HGSLANQVVHPADLCFKLPDNVSLEEGA-MCEPLSVGLHAC-RRANIGPETNVLIMGAGP 192
            G  A  +V PA     +PD V   + A   + +    HA  R   + P   VL++G G 
Sbjct: 117 DGGFAEYIVVPARALVPVPDGVPFAQAAVATDAVLTPYHAVVRAGEVKPGETVLVIGLGG 176

Query: 193 IGLVTMLGAPRAFGAPRIVIVDVDDYRLSVAKEIGADNIVKVSTNLQDIAEEVEKIQKAM 252
           +GL  +  A +A GA  ++ VD+ + +L +AKE+GAD   +V  +L D     +K    +
Sbjct: 177 LGLNAVQIA-KAMGA-AVIAVDIKEEKLELAKELGAD---EVLNSLDDSP--KDKKAAGL 229

Query: 253 GTGIDVSFDCAGLNKTMSTALGATCAGGKVCLVGMGHHEMTVPLTPAAVREVDVVGVFRY 312
           G G DV FD  G   T   A  A   GG++ +VG+G  ++TV L+    RE+ ++G F  
Sbjct: 230 GGGFDVIFDFVGTQPTFEDAQKAVKPGGRIVVVGLGRDKLTVDLSDLIARELRIIGSFGG 289

Query: 313 -KNTWPLCLELLRSGKIDVKPLVTHRFGFSQKEVEEAFETSARGGTAIKVMFN 364
                P  L+L+  GK+D  P V  R      E+ E  E   +G    +V+  
Sbjct: 290 TPEDLPEVLDLIAKGKLD--PQVETR---PLDEIPEVLERLHKGKVKGRVVLV 337

This group contains enzymes of the zinc-dependent alcohol dehydrogenase family, including members (aka MDR) identified as 6-hydroxycyclohex-1-ene-1-carboxyl-CoA dehydrogenase and N-benzyl-3-pyrrolidinol dehydrogenase. 6-hydroxycyclohex-1-ene-1-carboxyl-CoA dehydrogenase catalyzes the conversion of 6-Hydroxycyclohex-1-enecarbonyl-CoA and NAD+ to 6-Ketoxycyclohex-1-ene-1-carboxyl-CoA,NADH, and H+. This group displays the characteristic catalytic and structural zinc sites of the zinc-dependent alcohol dehydrogenases. NAD(P)(H)-dependent oxidoreductases are the major enzymes in the interconversion of alcohols and aldehydes, or ketones. Alcohol dehydrogenase in the liver converts ethanol and NAD+ to acetaldehyde and NADH, while in yeast and some other microorganisms ADH catalyzes the conversion acetaldehyde to ethanol in alcoholic fermentation. ADH is a member of the medium chain alcohol dehydrogenase family (MDR), which have a NAD(P)(H)-binding domain in a Rossmann fold of a beta-alpha form. The NAD(H)-binding region is comprised of 2 structurally similar halves, each of which contacts a mononucleotide. A GxGxxG motif after the first mononucleotide contact half allows the close contact of the coenzyme with the ADH backbone. The N-terminal catalytic domain has a distant homology to GroES. These proteins typically form dimers (typically higher plants, mammals) or tetramers (yeast, bacteria), and have 2 tightly bound zinc atoms per subunit, a catalytic zinc at the active site and a structural zinc in a lobe of the catalytic domain. NAD(H)-binding occurs in the cleft between the catalytic and coenzyme-binding domains at the active site, and coenzyme binding induces a conformational closing of this cleft. Coenzyme binding typically precedes and contributes to substrate binding. In human ADH catalysis, the zinc ion helps coordinate the alcohol, followed by deprotonation of a histidine, the ribose of NAD, a serine, then the alcohol, which allows the transfer of a hydride to NAD+, creating NADH and a zinc-bound aldehyde or ketone. In yeast and some bacteria, the active site zinc binds an aldehyde, polarizing it, and leading to the reverse reaction. Length = 338

>gnl|CDD|182130 PRK09880, PRK09880, L-idonate 5-dehydrogenase; Provisional

 Score =  188 bits (480), Expect = 6e-57
 Identities = 105/323 (32%), Positives = 158/323 (48%), Gaps = 16/323 (4%)

Query: 43  DVLVRMKAVGICGSDVHYLKTLRCADFVVKEPMVIGHECAGVIEKVGSEVKTLVPGDRVA 102
             LV++   GICGSD+HY +  +  +FV+K PMV+GHE  G I    S+   L  G  VA
Sbjct: 29  GTLVQITRGGICGSDLHYYQEGKVGNFVIKAPMVLGHEVIGKIVH--SDSSGLKEGQTVA 86

Query: 103 LEPGISCWRCDHCKGGRYNLCPEMKFFA----TPPVHGSLANQVVHPADLCFKLPDNVSL 158
           + P   C  C +C     N C  M+FF      P V G      V     C   P+    
Sbjct: 87  INPSKPCGHCKYCLSHNENQCTTMRFFGSAMYFPHVDGGFTRYKVVDTAQCIPYPEKADE 146

Query: 159 EEGAMCEPLSVGLHACRRANIGPETNVLIMGAGPIGLVTMLGAPRAFGAPRIVIVDVDDY 218
           +  A  EPL+V +HA  +A       V + G GPIG + ++ A +  GA  IV  DV   
Sbjct: 147 KVMAFAEPLAVAIHAAHQAGDLQGKRVFVSGVGPIGCL-IVAAVKTLGAAEIVCADVSPR 205

Query: 219 RLSVAKEIGADNIVKVSTNLQDIAEEVEKIQKAMGTGIDVSFDCAGLNKTMSTALGATCA 278
            LS+A+E+GAD +V    N Q+  ++++  +   G   DVSF+ +G   +++T L  T A
Sbjct: 206 SLSLAREMGADKLV----NPQN--DDLDHYKAEKGY-FDVSFEVSGHPSSINTCLEVTRA 258

Query: 279 GGKVCLVGMGHHEMTVPLTPAAVREVDVVGVFRYKNTWPLCLELLRSGKIDVKPLVTHRF 338
            G +  VGMG      P+    V+E+ + G FR+   +   +  L +G I+  PL++  +
Sbjct: 259 KGVMVQVGMGGAPPEFPMMTLIVKEISLKGSFRFTEEFNTAVSWLANGVINPLPLLSAEY 318

Query: 339 GFSQKEVEEAFETSARGGTAIKV 361
            F+   +EEA   +     A KV
Sbjct: 319 PFTD--LEEALIFAGDKTQAAKV 339

Length = 343

>gnl|CDD|176240 cd08279, Zn_ADH_class_III, Class III alcohol dehydrogenase

 Score =  184 bits (470), Expect = 3e-55
 Identities = 114/368 (30%), Positives = 161/368 (43%), Gaps = 41/368 (11%)

Query: 20  AAWLLGVN-TLKIQPFELPSLGPYDVLVRMKAVGICGSDVHYLKTLRCADFVVKEPMVIG 78
           AA L  V   L+I+  EL   GP +VLVR+ A G+C SD+H +      D     P V+G
Sbjct: 3   AAVLHEVGKPLEIEEVELDDPGPGEVLVRIAAAGLCHSDLHVVT----GDLPAPLPAVLG 58

Query: 79  HECAGVIEKVGSEVKTLVPGDRVALEPGISCWRCDHCKGGRYNLCPE------MKFFATP 132
           HE AGV+E+VG  V  + PGD V L    +C  C +C  G+ NLC         +     
Sbjct: 59  HEGAGVVEEVGPGVTGVKPGDHVVLSWIPACGTCRYCSRGQPNLCDLGAGILGGQLPDGT 118

Query: 133 PVH-------------GSLANQVVHPADLCFKLPDNVSLEEGAM---CEPLSVGLHACRR 176
                           G+ A   V P     K+ D++ L+  A+        VG      
Sbjct: 119 RRFTADGEPVGAMCGLGTFAEYTVVPEASVVKIDDDIPLDRAALLGCGVTTGVG-AVVNT 177

Query: 177 ANIGPETNVLIMGAGPIGLVTMLGAPRAFGAPRIVIVDVDDYRLSVAKEIGADNIVKVST 236
           A + P   V ++G G +GL  + GA R  GA RI+ VD    +L +A+  GA + V  S 
Sbjct: 178 ARVRPGDTVAVIGCGGVGLNAIQGA-RIAGASRIIAVDPVPEKLELARRFGATHTVNASE 236

Query: 237 NLQDIAEEVEKIQKAMGTGIDVSFDCAGLNKTMSTALGATCAGGKVCLVGMGHHEMTVPL 296
              D  E V  +    G G D +F+  G   T+  AL  T  GG   +VGMG    TV L
Sbjct: 237 --DDAVEAVRDLTD--GRGADYAFEAVGRAATIRQALAMTRKGGTAVVVGMGPPGETVSL 292

Query: 297 TPA--AVREVDVVGVF----RYKNTWPLCLELLRSGKIDVKPLVTHRFGFSQKEVEEAFE 350
                 + E  + G        +   P  L+L R+G++ +  LVT R+   +  + EAF 
Sbjct: 293 PALELFLSEKRLQGSLYGSANPRRDIPRLLDLYRAGRLKLDELVTRRYSLDE--INEAFA 350

Query: 351 TSARGGTA 358
               G  A
Sbjct: 351 DMLAGENA 358

Glutathione-dependent formaldehyde dehydrogenases (FDHs, Class III ADH) are members of the zinc-dependent/medium chain alcohol dehydrogenase family. FDH converts formaldehyde and NAD(P) to formate and NAD(P)H. The initial step in this process the spontaneous formation of a S-(hydroxymethyl)glutathione adduct from formaldehyde and glutathione, followed by FDH-mediated oxidation (and detoxification) of the adduct to S-formylglutathione. NAD(P)(H)-dependent oxidoreductases are the major enzymes in the interconversion of alcohols and aldehydes or ketones. Alcohol dehydrogenase in the liver converts ethanol and NAD+ to acetaldehyde and NADH, while in yeast and some other microorganisms ADH catalyzes the conversion acetaldehyde to ethanol in alcoholic fermentation. Class III ADH are also known as glutathione-dependent formaldehyde dehydrogenase (FDH), which convert aldehydes to corresponding carboxylic acid and alcohol. ADH is a member of the medium chain alcohol dehydrogenase family (MDR), which has a NAD(P)(H)-binding domain in a Rossmann fold of an beta-alpha form. The NAD(H)-binding region is comprised of 2 structurally similar halves, each of which contacts a mononucleotide. A GxGxxG motif after the first mononucleotide contact half allows the close contact of the coenzyme with the ADH backbone. The N-terminal catalytic domain has a distant homology to GroES. These proteins typically form dimers (typically higher plants, mammals) or tetramers (yeast, bacteria), and have 2 tightly bound zinc atoms per subunit, a catalytic zinc at the active site and a structural zinc in a lobe of the catalytic domain. NAD(H) binding occurs in the cleft between the catalytic and coenzyme-binding domains at the active site, and coenzyme binding induces a conformational closing of this cleft. Coenzyme binding typically precedes and contributes to substrate binding. Length = 363

>gnl|CDD|223992 COG1064, AdhP, Zn-dependent alcohol dehydrogenases [General function prediction only]

 Score =  182 bits (463), Expect = 2e-54
 Identities = 101/333 (30%), Positives = 167/333 (50%), Gaps = 37/333 (11%)

Query: 29  LKIQPFELPSLGPYDVLVRMKAVGICGSDVHYLKTLRCADF-VVKEPMVIGHECAGVIEK 87
           L+I+   +P  GP +VL++++A G+C +D+H  K     D+ V K P++ GHE  G + +
Sbjct: 16  LEIEEVPVPEPGPGEVLIKVEACGVCHTDLHVAK----GDWPVPKLPLIPGHEIVGTVVE 71

Query: 88  VGSEVKTLVPGDRVALE-PGISCWRCDHCKGGRYNLCPEMKFFATPPVHGSLANQVVHPA 146
           VG  V  L  GDRV +    ISC  C++C+ G  NLCP  +        G  A  VV PA
Sbjct: 72  VGEGVTGLKVGDRVGVGWLVISCGECEYCRSGNENLCPN-QKITGYTTDGGYAEYVVVPA 130

Query: 147 DLCFKLPDNVSLEEGAMCEPLS-VGL---HACRRANIGPETNVLIMGAGPIGLVTMLGAP 202
               K+P+ + L E A   PL   G+    A ++AN+ P   V ++GAG +G + +  A 
Sbjct: 131 RYVVKIPEGLDLAEAA---PLLCAGITTYRALKKANVKPGKWVAVVGAGGLGHMAVQYA- 186

Query: 203 RAFGAPRIVIVDVDDYRLSVAKEIGADNIVKVSTNLQDIAEEVEKIQKAMGTGIDVSFDC 262
           +A GA  ++ +   + +L +AK++GAD++  ++++  D  E V++I        D   D 
Sbjct: 187 KAMGA-EVIAITRSEEKLELAKKLGADHV--INSSDSDALEAVKEI-------ADAIIDT 236

Query: 263 AGLNKTMSTALGATCAGGKVCLVGM--GHHEMTVPLTPAAVREVDVVG--VFRYKNTWPL 318
            G   T+  +L A   GG + LVG+  G     +P     ++E+ +VG  V    +    
Sbjct: 237 VG-PATLEPSLKALRRGGTLVLVGLPGGGPIPLLPAFLLILKEISIVGSLVGTRADL--- 292

Query: 319 CLELLR-SGKIDVKPLVTHRFGFSQKEVEEAFE 350
             E L  + +  +KP +         E+ EA+E
Sbjct: 293 -EEALDFAAEGKIKPEILETIPLD--EINEAYE 322

Length = 339

>gnl|CDD|223990 COG1062, AdhC, Zn-dependent alcohol dehydrogenases, class III [Energy production and conversion]

 Score =  178 bits (455), Expect = 5e-53
 Identities = 101/361 (27%), Positives = 157/361 (43%), Gaps = 52/361 (14%)

Query: 29  LKIQPFELPSLGPYDVLVRMKAVGICGSDVHYLKTLRCADFVVKEPMVIGHECAGVIEKV 88
           L+I+  +L      +VLVR+ A G+C +D H L       F    P V+GHE AG++E V
Sbjct: 15  LEIEEVDLDPPRAGEVLVRITATGVCHTDAHTLSGDDPEGF----PAVLGHEGAGIVEAV 70

Query: 89  GSEVKTLVPGDRVALEPGISCWRCDHCKGGRYNLCPEMKFFAT----------------- 131
           G  V ++ PGD V L     C +C  C  G+ NLC      AT                 
Sbjct: 71  GEGVTSVKPGDHVILLFTPECGQCKFCLSGKPNLC--EAIRATQGKGTMPDGTTRLSGNG 128

Query: 132 -PPVH----GSLANQVVHPADLCFKLPDNVSLEEGAM--CEPLSVGLHACRRANIGPETN 184
            P  H     + A   V       K+  +  LE+  +  C   +        A + P   
Sbjct: 129 VPVYHYLGCSTFAEYTVVHEISLVKIDPDAPLEKACLLGCGVTTGIGAVVNTAKVEPGDT 188

Query: 185 VLIMGAGPIGLVTMLGAPRAFGAPRIVIVDVDDYRLSVAKEIGADNIVKVSTNLQDIAEE 244
           V + G G +GL  + GA +A GA RI+ VD++  +L +AK+ GA + V    N +++ + 
Sbjct: 189 VAVFGLGGVGLAAIQGA-KAAGAGRIIAVDINPEKLELAKKFGATHFV----NPKEVDDV 243

Query: 245 VEKIQKAMGTGIDVSFDCAGLNKTMSTALGATCAGGKVCLVGMGHHEMTVPLTPAAVREV 304
           VE I +    G D +F+C G  + M  AL AT  GG   ++G+      +   P      
Sbjct: 244 VEAIVELTDGGADYAFECVGNVEVMRQALEATHRGGTSVIIGVAGAGQEISTRP-----F 298

Query: 305 DVVGVFRYKNTW----------PLCLELLRSGKIDVKPLVTHRFGFSQKEVEEAFETSAR 354
            +V    +K +           P  ++L  +GK+ +  LVTH      +++ EAF+    
Sbjct: 299 QLVTGRVWKGSAFGGARPRSDIPRLVDLYMAGKLPLDRLVTHTIPL--EDINEAFDLMHE 356

Query: 355 G 355
           G
Sbjct: 357 G 357

Length = 366

>gnl|CDD|176245 cd08285, NADP_ADH, NADP(H)-dependent alcohol dehydrogenases

 Score =  177 bits (452), Expect = 1e-52
 Identities = 110/348 (31%), Positives = 155/348 (44%), Gaps = 32/348 (9%)

Query: 20  AAWLLGVNTLKIQPFELPSLGPYDVLVRMKAVGICGSDVHYLKTLRCADFVVKEPMVIGH 79
           A  +LG+  +      +P  GP D +VR  AV  C SDVH   T+       +  M++GH
Sbjct: 3   AFAMLGIGKVGWIEKPIPVCGPNDAIVRPTAVAPCTSDVH---TVWGGAPGERHGMILGH 59

Query: 80  ECAGVIEKVGSEVKTLVPGDRVALEPGISCWRCDHCKGGRYNLCPEM----KFFATPPVH 135
           E  GV+E+VGSEVK   PGDRV +      WR    + G  +    M    KF  +    
Sbjct: 60  EAVGVVEEVGSEVKDFKPGDRVIVPAITPDWRSVAAQRGYPSQSGGMLGGWKF--SNFKD 117

Query: 136 GSLANQV-VHPADLCF-KLPDNVSLEEGAMC-EPLSVGLHACRRANIGPETNVLIMGAGP 192
           G  A    V+ AD     LPD ++ E+  M  + +S G H    ANI     V + G GP
Sbjct: 118 GVFAEYFHVNDADANLAPLPDGLTDEQAVMLPDMMSTGFHGAELANIKLGDTVAVFGIGP 177

Query: 193 IGLVTMLGAPRAFGAPRIVIVDVDDYRLSVAKEIGADNIVKVSTNLQDIAEEVEKIQKAM 252
           +GL+ + GA R  GA RI+ V     R+ +AKE GA +IV       D+ E++ K+    
Sbjct: 178 VGLMAVAGA-RLRGAGRIIAVGSRPNRVELAKEYGATDIVDYKN--GDVVEQILKLTG-- 232

Query: 253 GTGIDVSFDCAGLNKTMSTALGATCAGGKVCLVGMGHHEMTVPLTPAAVREVDVVGVFRY 312
           G G+D      G   T   AL     GG +  V     +  +P+     RE   VG+   
Sbjct: 233 GKGVDAVIIAGGGQDTFEQALKVLKPGGTISNVNYYGEDDYLPI----PREEWGVGMGHK 288

Query: 313 KNTWPLC----------LELLRSGKIDVKPLVTHRFGFSQKEVEEAFE 350
                LC            L+  G++D   L+TH F F   ++EEA  
Sbjct: 289 TINGGLCPGGRLRMERLASLIEYGRVDPSKLLTHHF-FGFDDIEEALM 335

This group is predominated by atypical alcohol dehydrogenases; they exist as tetramers and exhibit specificity for NADP(H) as a cofactor in the interconversion of alcohols and aldehydes, or ketones. Like other zinc-dependent alcohol dehydrogenases (ADH) of the medium chain alcohol dehydrogenase/reductase family (MDR), tetrameric ADHs have a catalytic zinc that resides between the catalytic and NAD(H)binding domains; however, they do not have and a structural zinc in a lobe of the catalytic domain. The medium chain alcohol dehydrogenase family (MDR) has a NAD(P)(H)-binding domain in a Rossmann fold of a beta-alpha form. The N-terminal region typically has an all-beta catalytic domain. These proteins typically form dimers (typically higher plants, mammals) or tetramers (yeast, bacteria), and have 2 tightly bound zinc atoms per subunit. Length = 351

>gnl|CDD|176187 cd05284, arabinose_DH_like, D-arabinose dehydrogenase

 Score =  175 bits (445), Expect = 9e-52
 Identities = 102/341 (29%), Positives = 161/341 (47%), Gaps = 37/341 (10%)

Query: 29  LKIQPFELPSLGPYDVLVRMKAVGICGSDVHYLKTLRCADFVVKEPMVIGHECAGVIEKV 88
           L+++   +P  GP  VLVR+   G+C SD+H +  +       K P  +GHE AG +E+V
Sbjct: 13  LRLEDVPVPEPGPGQVLVRVGGAGVCHSDLHVIDGVWGGILPYKLPFTLGHENAGWVEEV 72

Query: 89  GSEVKTLVPGDRVALEPGISCWRCDHCKGGRYNLCPEMKFFATPPV--HGSLANQVVHPA 146
           GS V  L  GD V + P   C  C +C+ G  N C   +F   P +   G  A  ++ P+
Sbjct: 73  GSGVDGLKEGDPVVVHPPWGCGTCRYCRRGEENYCENARF---PGIGTDGGFAEYLLVPS 129

Query: 147 DLCFKLPDNVSLEEGAMCEPLS-VGL---HACRRAN--IGPETNVLIMGAGPIGL----V 196
               KLP  +   E A   PL+  GL   HA ++A   + P + V+++G G  GL    V
Sbjct: 130 RRLVKLPRGLDPVEAA---PLADAGLTAYHAVKKALPYLDPGSTVVVIGVG--GLGHIAV 184

Query: 197 TMLGAPRAFGAPRIVIVDVDDYRLSVAKEIGADNIVKVSTNLQDIAEEVEKIQKAMGTGI 256
            +L   RA     ++ VD  +  L +A+ +GAD+++  S    D+ EEV ++    G G 
Sbjct: 185 QIL---RALTPATVIAVDRSEEALKLAERLGADHVLNASD---DVVEEVRELTG--GRGA 236

Query: 257 DVSFDCAGLNKTMSTALGATCAGGKVCLVGMGHHEMTVPLTPAAVREVDVVGVF--RYKN 314
           D   D  G ++T++ A      GG+  +VG G H   +P +     E+ V+G        
Sbjct: 237 DAVIDFVGSDETLALAAKLLAKGGRYVIVGYGGH-GRLPTSDLVPTEISVIGSLWGTRAE 295

Query: 315 TWPLCLELLRSGKIDVKPLVTHRFGFSQKEVEEAFETSARG 355
              + + L  SGK+  K  +T    F  ++  EA +    G
Sbjct: 296 LVEV-VALAESGKV--KVEITK---FPLEDANEALDRLREG 330

This group contains arabinose dehydrogenase (AraDH) and related alcohol dehydrogenases. AraDH is a member of the medium chain dehydrogenase/reductase family and catalyzes the NAD(P)-dependent oxidation of D-arabinose and other pentoses, the initial step in the metabolism of d-arabinose into 2-oxoglutarate. Like the alcohol dehydrogenases, AraDH binds a zinc in the catalytic cleft as well as a distal structural zinc. AraDH forms homotetramers as a dimer of dimers. AraDH replaces a conserved catalytic His with replace with Arg, compared to the canonical ADH site. NAD(P)(H)-dependent oxidoreductases are the major enzymes in the interconversion of alcohols and aldehydes, or ketones. Alcohol dehydrogenase in the liver converts ethanol and NAD+ to acetaldehyde and NADH, while in yeast and some other microorganisms ADH catalyzes the conversion acetaldehyde to ethanol in alcoholic fermentation. ADH is a member of the medium chain alcohol dehydrogenase family (MDR), which has a NAD(P)(H)-binding domain in a Rossmann fold of a beta-alpha form. The NAD(H)-binding region is comprised of 2 structurally similar halves, each of which contacts a mononucleotide. A GxGxxG motif after the first mononucleotide contact half allows the close contact of the coenzyme with the ADH backbone. The N-terminal catalytic domain has a distant homology to GroES. These proteins typically form dimers (typically higher plants, mammals) or tetramers (yeast, bacteria), and have 2 tightly bound zinc atoms per subunit, a catalytic zinc at the active site and a structural zinc in a lobe of the catalytic domain. NAD(H) binding occurs in the cleft between the catalytic and coenzyme-binding domains at the active site, and coenzyme binding induces a conformational closing of this cleft. Coenzyme binding typically precedes and contributes to substrate binding. In human ADH catalysis, the zinc ion helps coordinate the alcohol, followed by deprotonation of a histidine, the ribose of NAD, a serine, then the alcohol, which allows the transfer of a hydride to NAD+, creating NADH and a zinc-bound aldehyde or ketone. In yeast and some bacteria, the active site zinc binds an aldehyde, polarizing it, and leading to the reverse reaction. Length = 340

>gnl|CDD|176193 cd08231, MDR_TM0436_like, Hypothetical enzyme TM0436 resembles the zinc-dependent alcohol dehydrogenases (ADH)

 Score =  172 bits (439), Expect = 1e-50
 Identities = 116/373 (31%), Positives = 164/373 (43%), Gaps = 45/373 (12%)

Query: 18  NMAAWLLGVNT-LKIQPFELPSLGPYDVLVRMKAVGICGSDVHYLKTLRCADFVVKEPMV 76
             AA L G    L+I+   LP L P  VLVR++  G+CGSDVH   T+      V  P++
Sbjct: 1   ARAAVLTGPGKPLEIREVPLPDLEPGAVLVRVRLAGVCGSDVH---TVAGRRPRVPLPII 57

Query: 77  IGHECAGVIEKVGSEVKT------LVPGDRVALEPGISCWRCDHCKGGRYNLCPEMKFF- 129
           +GHE  G +  +G  V T      L  GDRV    G  C RC  C  G    C   K + 
Sbjct: 58  LGHEGVGRVVALGGGVTTDVAGEPLKVGDRVTWSVGAPCGRCYRCLVGDPTKCENRKKYG 117

Query: 130 -----ATPPVHGSLANQVVHPADLCF-KLPDNVSLE--EGAMCEPLSVGLHACRRAN-IG 180
                  P + G  A  +  P      ++PDNV  E    A C  L+  L A  RA  +G
Sbjct: 118 HEASCDDPHLSGGYAEHIYLPPGTAIVRVPDNVPDEVAAPANC-ALATVLAALDRAGPVG 176

Query: 181 PETNVLIMGAGPIGLVTMLGAPRAFGAPRIVIVDVDDYRLSVAKEIGADNIVKVSTNLQD 240
               V++ GAGP+GL   + A +  GA R++++D    RL +A+E GAD  + +      
Sbjct: 177 AGDTVVVQGAGPLGL-YAVAAAKLAGARRVIVIDGSPERLELAREFGADATIDIDE---- 231

Query: 241 IAEEVEKIQKAM----GTGIDVSFDCAGLNKTMSTALGATCAGGKVCLVGMGHHEMTVPL 296
              + ++         G G DV  + +G    +   L     GG   LVG      TVPL
Sbjct: 232 -LPDPQRRAIVRDITGGRGADVVIEASGHPAAVPEGLELLRRGGTYVLVGSVAPAGTVPL 290

Query: 297 TPAAV--REVDVVGVFRYKNTWPLCL----ELLR--SGKIDVKPLVTHRFGFSQKEVEEA 348
            P  +  + + ++GV  Y    P  L      L     +     LVTHR  +  +++ EA
Sbjct: 291 DPERIVRKNLTIIGVHNYD---PSHLYRAVRFLERTQDRFPFAELVTHR--YPLEDINEA 345

Query: 349 FETSARGGTAIKV 361
            E  A  GTA+KV
Sbjct: 346 LE-LAESGTALKV 357

This group contains the hypothetical TM0436 alcohol dehydrogenase from Thermotoga maritima, proteins annotated as 5-exo-alcohol dehydrogenase, and other members of the medium chain dehydrogenases/reductase (MDR)/zinc-dependent alcohol dehydrogenase-like family. MDR, which contains the zinc-dependent alcohol dehydrogenase (ADH-Zn) and related proteins, is a diverse group of proteins related to the first identified member, class I mammalian ADH. MDRs display a broad range of activities and are distinguished from the smaller short chain dehydrogenases (~ 250 amino acids vs. the ~ 350 amino acids of the MDR). The MDR proteins have 2 domains: a C-terminal NAD(P) binding-Rossmann fold domain of a beta-alpha form and an N-terminal catalytic domain with distant homology to GroES. The MDR group contains a host of activities, including the founding alcohol dehydrogenase (ADH), quinone reductase, sorbitol dehydrogenase, formaldehyde dehydrogenase, butanediol DH, ketose reductase, cinnamyl reductase, and numerous others. The zinc-dependent alcohol dehydrogenases (ADHs) catalyze the NAD(P)(H)-dependent interconversion of alcohols to aldehydes or ketones. Active site zinc has a catalytic role, while structural zinc aids in stability. Length = 361

>gnl|CDD|176218 cd08256, Zn_ADH2, Alcohol dehydrogenases of the MDR family

 Score =  171 bits (436), Expect = 2e-50
 Identities = 104/346 (30%), Positives = 180/346 (52%), Gaps = 24/346 (6%)

Query: 30  KIQPFELPSLGPYDVLVRMKAVGICGSDVHYLKTLRCADFV---------VKEPMVIGHE 80
           +++   +P  GP ++LV+++A GIC  D   +K    A            VK PM+ GHE
Sbjct: 13  RLEEVPVPRPGPGEILVKVEACGICAGD---IKCYHGAPSFWGDENQPPYVKPPMIPGHE 69

Query: 81  CAGVIEKVGSEVKT--LVPGDRVALEPGISCWRCDHCKGGRYNLCPEMKFFA-TPPVHGS 137
             G + ++G   +   +  GDRV  E  + CW C  C  G+Y +C +   +     V+G 
Sbjct: 70  FVGRVVELGEGAEERGVKVGDRVISEQIVPCWNCRFCNRGQYWMCQKHDLYGFQNNVNGG 129

Query: 138 LANQVVHPAD-LCFKLPDNVSLEEGAMCEPLSVGLHACRRANIGPETNVLIMGAGPIGLV 196
           +A  +  P + +  K+PD++  E+  + EPL+  LHA  RANI  +  V++ GAGP+GL 
Sbjct: 130 MAEYMRFPKEAIVHKVPDDIPPEDAILIEPLACALHAVDRANIKFDDVVVLAGAGPLGL- 188

Query: 197 TMLGAPRAFGAPRIVIVDVDDYRLSVAKEIGADNIVKVSTNLQDIAEEVEKIQKAMGTGI 256
            M+GA R     +++++D+ D RL++A++ GAD ++       D+ E+++++    G G 
Sbjct: 189 GMIGAARLKNPKKLIVLDLKDERLALARKFGADVVLNPPE--VDVVEKIKELTG--GYGC 244

Query: 257 DVSFDCAGLNKTMSTALGATCAGGKVCLVGMGHHEMTVPLTPAAVR-EVDVVGVFRYKNT 315
           D+  +  G    +   L      G+     +    +TV  +    R E+DV+G       
Sbjct: 245 DIYIEATGHPSAVEQGLNMIRKLGRFVEFSVFGDPVTVDWSIIGDRKELDVLGSHLGPYC 304

Query: 316 WPLCLELLRSGKIDVKPLVTHRFGFSQKEVEEAFETSARGGTAIKV 361
           +P+ ++L+ SG++    +VTH+  F  ++ EEAFE  ARG  +IKV
Sbjct: 305 YPIAIDLIASGRLPTDGIVTHQ--FPLEDFEEAFELMARGDDSIKV 348

This group has the characteristic catalytic and structural zinc-binding sites of the zinc-dependent alcohol dehydrogenases of the MDR family. The medium chain dehydrogenases/reductase (MDR)/zinc-dependent alcohol dehydrogenase-like family, which contains the zinc-dependent alcohol dehydrogenase (ADH-Zn) and related proteins, is a diverse group of proteins related to the first identified member, class I mammalian ADH. MDRs display a broad range of activities and are distinguished from the smaller short chain dehydrogenases (~ 250 amino acids vs. the ~ 350 amino acids of the MDR). The MDR proteins have 2 domains: a C-terminal NAD(P)-binding Rossmann fold domain of a beta-alpha form and an N-terminal catalytic domain with distant homology to GroES. The MDR group contains a host of activities, including the founding alcohol dehydrogenase (ADH), quinone reductase, sorbitol dehydrogenase, formaldehyde dehydrogenase, butanediol DH, ketose reductase, cinnamyl reductase, and numerous others. The zinc-dependent alcohol dehydrogenases (ADHs) catalyze the NAD(P)(H)-dependent interconversion of alcohols to aldehydes or ketones. Active site zinc has a catalytic role, while structural zinc aids in stability. Length = 350

>gnl|CDD|176246 cd08286, FDH_like_ADH2, formaldehyde dehydrogenase (FDH)-like

 Score =  170 bits (432), Expect = 8e-50
 Identities = 113/348 (32%), Positives = 173/348 (49%), Gaps = 25/348 (7%)

Query: 25  GVNTLKIQPFELPSL-GPYDVLVRMKAVGICGSDVHYLKTLRCADFV-VKEPMVIGHECA 82
           G   +  +    P++  P D +V+M    ICG+D+H LK     D   V    ++GHE  
Sbjct: 8   GPGKISWEDRPKPTIQEPTDAIVKMLKTTICGTDLHILK----GDVPTVTPGRILGHEGV 63

Query: 83  GVIEKVGSEVKTLVPGDRVALEPGISCWRCDHCKGGRYNLCPEMKFFATPPVHGSLANQV 142
           GV+E+VGS V     GDRV +    SC  C +C+ G Y+ C    +     + G+ A  V
Sbjct: 64  GVVEEVGSAVTNFKVGDRVLISCISSCGTCGYCRKGLYSHCESGGWILGNLIDGTQAEYV 123

Query: 143 VHP-ADLC-FKLPDNVSLEEGAMCEPLSVGL---HAC--RRANIGPETNVLIMGAGPIGL 195
             P AD   +KLP+ V  E   M   LS  L   + C      + P   V I+GAGP+GL
Sbjct: 124 RIPHADNSLYKLPEGVDEEAAVM---LSDILPTGYECGVLNGKVKPGDTVAIVGAGPVGL 180

Query: 196 VTMLGAPRAFGAPRIVIVDVDDYRLSVAKEIGADNIVKVSTNLQDIAEEVEKIQKAMGTG 255
             +L A + +   +I++VD+DD RL VAK++GA + V  +    D  E+V ++    G G
Sbjct: 181 AALLTA-QLYSPSKIIMVDLDDNRLEVAKKLGATHTVNSAK--GDAIEQVLELTD--GRG 235

Query: 256 IDVSFDCAGLNKTMSTALGATCAGGKVCLVGMGHHEMTVPLTPAAVREVDVVGVFRYKNT 315
           +DV  +  G+  T          GG +  VG+    + + L    ++ + +       NT
Sbjct: 236 VDVVIEAVGIPATFELCQELVAPGGHIANVGVHGKPVDLHLEKLWIKNITITTGLVDTNT 295

Query: 316 WPLCLELLRSGKIDVKPLVTHRFGFSQKEVEEAFETSARGGT--AIKV 361
            P+ L+L+ SGK+D   LVTHRF  S  E+E+A++T +      A+KV
Sbjct: 296 TPMLLKLVSSGKLDPSKLVTHRFKLS--EIEKAYDTFSAAAKHKALKV 341

This group is related to formaldehyde dehydrogenase (FDH), which is a member of the zinc-dependent/medium chain alcohol dehydrogenase family. This family uses NAD(H) as a cofactor in the interconversion of alcohols and aldehydes, or ketones. Another member is identified as a dihydroxyacetone reductase. Like the zinc-dependent alcohol dehydrogenases (ADH) of the medium chain alcohol dehydrogenase/reductase family (MDR), tetrameric FDHs have a catalytic zinc that resides between the catalytic and NAD(H)binding domains and a structural zinc in a lobe of the catalytic domain. Unlike ADH, where NAD(P)(H) acts as a cofactor, NADH in FDH is a tightly bound redox cofactor (similar to nicotinamide proteins). The medium chain alcohol dehydrogenase family (MDR) has a NAD(P)(H)-binding domain in a Rossmann fold of a beta-alpha form. The N-terminal region typically has an all-beta catalytic domain. These proteins typically form dimers (typically higher plants, mammals) or tetramers (yeast, bacteria), and have 2 tightly bound zinc atoms per subunit. Length = 345

>gnl|CDD|176244 cd08284, FDH_like_2, Glutathione-dependent formaldehyde dehydrogenase related proteins, child 2

 Score =  168 bits (427), Expect = 4e-49
 Identities = 105/333 (31%), Positives = 159/333 (47%), Gaps = 23/333 (6%)

Query: 40  GPYDVLVRMKAVGICGSDVHYLKTLRCADFVVKEPMVIGHECAGVIEKVGSEVKTLVPGD 99
            P D +V++ A  ICGSD+H  +             V+GHE  G + +VG EV+TL  GD
Sbjct: 24  DPTDAIVKVTAAAICGSDLHIYR----GHIPSTPGFVLGHEFVGEVVEVGPEVRTLKVGD 79

Query: 100 RVALEPGISCWRCDHCKGGRYNLCPEMKFF---ATPPVHGSLANQVVHP-ADL-CFKLPD 154
           RV     I+C  C +C+ G+   C +   F    +P + G+ A  V  P AD    KLPD
Sbjct: 80  RVVSPFTIACGECFYCRRGQSGRCAKGGLFGYAGSPNLDGAQAEYVRVPFADGTLLKLPD 139

Query: 155 NVSLEEG-AMCEPLSVGLHACRRANIGPETNVLIMGAGPIGLVTMLGAPRAFGAPRIVIV 213
            +S E    + + L  G    +RA + P   V ++G GP+GL  +L A +  GA R+  V
Sbjct: 140 GLSDEAALLLGDILPTGYFGAKRAQVRPGDTVAVIGCGPVGLCAVLSA-QVLGAARVFAV 198

Query: 214 DVDDYRLSVAKEIGADNIVKVSTNLQDIAEEVEKIQKAM-GTGIDVSFDCAGLNKTMSTA 272
           D    RL  A  +GA+ I     N +D AE VE++++A  G G DV  +  G    +  A
Sbjct: 199 DPVPERLERAAALGAEPI-----NFED-AEPVERVREATEGRGADVVLEAVGGAAALDLA 252

Query: 273 LGATCAGGKVCLVGMGH-HEMTVPLTPAAVREVDV-VGVFRYKNTWPLCLELLRSGKIDV 330
                 GG +  VG+    E   P   A  + + +  G    ++ +P  L LL SG++D+
Sbjct: 253 FDLVRPGGVISSVGVHTAEEFPFPGLDAYNKNLTLRFGRCPVRSLFPELLPLLESGRLDL 312

Query: 331 KPLVTHRFGFSQKEVEEAFETSARGGTAIKVMF 363
           + L+ HR      E  EA+    +    +KV+ 
Sbjct: 313 EFLIDHRMPLE--EAPEAYRLFDK-RKVLKVVL 342

Glutathione-dependent formaldehyde dehydrogenases (FDHs) are members of the zinc-dependent/medium chain alcohol dehydrogenase family. Formaldehyde dehydrogenase (FDH) is a member of the zinc-dependent/medium chain alcohol dehydrogenase family. FDH converts formaldehyde and NAD to formate and NADH. The initial step in this process the spontaneous formation of a S-(hydroxymethyl)glutathione adduct from formaldehyde and glutathione, followed by FDH-mediated oxidation (and detoxification) of the adduct to S-formylglutathione. These tetrameric FDHs have a catalytic zinc that resides between the catalytic and NAD(H)binding domains and a structural zinc in a lobe of the catalytic domain. The medium chain alcohol dehydrogenase family (MDR) has a NAD(P)(H)-binding domain in a Rossmann fold of a beta-alpha form. The N-terminal region typically has an all-beta catalytic domain. These proteins typically form dimers (typically higher plants, mammals) or tetramers (yeast, bacteria), and have 2 tightly bound zinc atoms per subunit. Length = 344

>gnl|CDD|176239 cd08278, benzyl_alcohol_DH, Benzyl alcohol dehydrogenase

 Score =  162 bits (413), Expect = 9e-47
 Identities = 107/370 (28%), Positives = 155/370 (41%), Gaps = 61/370 (16%)

Query: 29  LKIQPFELPSLGPYDVLVRMKAVGICGSDVHYLKTLRCADFVVKEPMVIGHECAGVIEKV 88
             ++  EL    P +VLVR+ A GIC +D+     +R        P V+GHE AGV+E V
Sbjct: 15  FVLEDVELDDPRPDEVLVRIVATGICHTDLV----VRDGGLPTPLPAVLGHEGAGVVEAV 70

Query: 89  GSEVKTLVPGDRVALEPGISCWRCDHCKGGRYNLCPEM---KFFAT-------------P 132
           GS V  L PGD V L    SC  C +C  G    C       F                 
Sbjct: 71  GSAVTGLKPGDHVVLSFA-SCGECANCLSGHPAYCENFFPLNFSGRRPDGSTPLSLDDGT 129

Query: 133 PVHG------SLANQVVHPADLCFKLPDNVSLEEGAMCEPLSVGLHA-----CRRANIGP 181
           PVHG      S A   V       K+  +V LE  A   PL  G+              P
Sbjct: 130 PVHGHFFGQSSFATYAVVHERNVVKVDKDVPLELLA---PLGCGIQTGAGAVLNVLKPRP 186

Query: 182 ETNVLIMGAGPIGLVTMLGAPRAFGAPRIVIVDVDDYRLSVAKEIGADNIVKVSTNLQDI 241
            +++ + GAG +GL  ++ A +  G   I+ VD+ D RL +AKE+GA +++      +D+
Sbjct: 187 GSSIAVFGAGAVGLAAVMAA-KIAGCTTIIAVDIVDSRLELAKELGATHVINPKE--EDL 243

Query: 242 AEEVEKIQKAMGTGIDVSFDCAGLNKTMSTALGATCAGGKVCLVGMG--HHEMTVPLTPA 299
              V  I++  G G+D + D  G+   +  A+ A    G + LVG      E+T+ +   
Sbjct: 244 ---VAAIREITGGGVDYALDTTGVPAVIEQAVDALAPRGTLALVGAPPPGAEVTLDVNDL 300

Query: 300 AVREVDVVGV---------FRYKNTWPLCLELLRSGKIDVKPLVTHRFGFSQKEVEEAFE 350
            V    + GV         F      P  +EL R GK     LVT    +  +++ +A  
Sbjct: 301 LVSGKTIRGVIEGDSVPQEF-----IPRLIELYRQGKFPFDKLVTF---YPFEDINQAIA 352

Query: 351 TSARGGTAIK 360
            S  G   IK
Sbjct: 353 DSESGKV-IK 361

Benzyl alcohol dehydrogenase is similar to liver alcohol dehydrogenase, but has some amino acid substitutions near the active site, which may determine the enzyme's specificity of oxidizing aromatic substrates. Also known as aryl-alcohol dehydrogenases, they catalyze the conversion of an aromatic alcohol + NAD+ to an aromatic aldehyde + NADH + H+. NAD(P)(H)-dependent oxidoreductases are the major enzymes in the interconversion of alcohols and aldehydes, or ketones. Alcohol dehydrogenase in the liver converts ethanol and NAD+ to acetaldehyde and NADH, while in yeast and some other microorganisms ADH catalyzes the conversion acetaldehyde to ethanol in alcoholic fermentation. ADH is a member of the medium chain alcohol dehydrogenase family (MDR), which has a NAD(P)(H)-binding domain in a Rossmann fold of a beta-alpha form. The NAD(H)-binding region is comprised of 2 structurally similar halves, each of which contacts a mononucleotide. A GxGxxG motif after the first mononucleotide contact half allows the close contact of the coenzyme with the ADH backbone. The N-terminal catalytic domain has a distant homology to GroES. These proteins typically form dimers (typically higher plants, mammals) or tetramers (yeast, bacteria), and have 2 tightly bound zinc atoms per subunit, a catalytic zinc at the active site and a structural zinc in a lobe of the catalytic domain. NAD(H) binding occurs in the cleft between the catalytic and coenzyme-binding domains at the active site, and coenzyme binding induces a conformational closing of this cleft. Coenzyme binding typically precedes and contributes to substrate binding. In human ADH catalysis, the zinc ion helps coordinate the alcohol, followed by deprotonation of a histidine, the ribose of NAD, a serine, then the alcohol, which allows the transfer of a hydride to NAD+, creating NADH and a zinc-bound aldehyde or ketone. In yeast and some bacteria, the active site zinc binds an aldehyde, polarizing it, and leading to the reverse reaction. Length = 365

>gnl|CDD|176223 cd08262, Zn_ADH8, Alcohol dehydrogenases of the MDR family

 Score =  160 bits (406), Expect = 5e-46
 Identities = 100/356 (28%), Positives = 151/356 (42%), Gaps = 29/356 (8%)

Query: 19  MAAWLLGVNTLKIQPFELPSLGPYDVLVRMKAVGICGSDVHYLKTLRCADFVVKEPM--- 75
           M A +     L ++    P  GP  VLV++ A GICGSD+H              P    
Sbjct: 1   MRAAVFRDGPLVVRDVPDPEPGPGQVLVKVLACGICGSDLHATAHPEAMVDDAGGPSLMD 60

Query: 76  -----VIGHECAGVIEKVGSEV-KTLVPGDRVALEPGISCWRCDHCKGGRYNLCPEMKFF 129
                V+GHE  G +   G    + L  G RV   P + C +   C  G     P     
Sbjct: 61  LGADIVLGHEFCGEVVDYGPGTERKLKVGTRVTSLPLLLCGQGASCGIGLSPEAP----- 115

Query: 130 ATPPVHGSLANQVVHPADLCFKLPDNVSLEEGAMCEPLSVGLHACRRANIGPETNVLIMG 189
                 G  A  ++    L  ++PD +S+E+ A+ EPL+VGLHA RRA + P    L++G
Sbjct: 116 ------GGYAEYMLLSEALLLRVPDGLSMEDAALTEPLAVGLHAVRRARLTPGEVALVIG 169

Query: 190 AGPIGLVTMLGAPRAFGAPRIVIVDVDDYRLSVAKEIGADNIVKVSTNLQDIAEEVEKIQ 249
            GPIGL  +    +A G   IV  D    R ++A  +GAD +V  + +    A   E  +
Sbjct: 170 CGPIGLAVIAAL-KARGVGPIVASDFSPERRALALAMGADIVVDPAADSPFAAWAAELAR 228

Query: 250 KAMGTGIDVSFDCAGLNKTMSTALGATCAGGKVCLVGMGHHEMTVPLTPAA--VREVDVV 307
                   V F+C G    +   +     GG++ +VG+     +  + PA    +E+ + 
Sbjct: 229 AGGPKP-AVIFECVGAPGLIQQIIEGAPPGGRIVVVGV--CMESDNIEPALAIRKELTLQ 285

Query: 308 GVFRY-KNTWPLCLELLRSGKIDVKPLVTHRFGFSQKEVEEAFETSARGGTAIKVM 362
               Y    +   L+ L  GK+DV P+VT   G     V +AFE         K++
Sbjct: 286 FSLGYTPEEFADALDALAEGKVDVAPMVTGTVGLD--GVPDAFEALRDPEHHCKIL 339

The medium chain dehydrogenases/reductase (MDR)/zinc-dependent alcohol dehydrogenase-like family, which contains the zinc-dependent alcohol dehydrogenase (ADH-Zn) and related proteins, is a diverse group of proteins related to the first identified member, class I mammalian ADH. MDRs display a broad range of activities and are distinguished from the smaller short chain dehydrogenases (~ 250 amino acids vs. the ~ 350 amino acids of the MDR). The MDR proteins have 2 domains: a C-terminal NAD(P)-binding Rossmann fold domain of a beta-alpha form and an N-terminal catalytic domain with distant homology to GroES. The MDR group contains a host of activities, including the founding alcohol dehydrogenase (ADH), quinone reductase, sorbitol dehydrogenase, formaldehyde dehydrogenase, butanediol DH, ketose reductase, cinnamyl reductase, and numerous others. The zinc-dependent alcohol dehydrogenases (ADHs) catalyze the NAD(P)(H)-dependent interconversion of alcohols to aldehydes or ketones. Active site zinc has a catalytic role, while structural zinc aids in stability. ADH-like proteins typically form dimers (typically higher plants, mammals) or tetramers (yeast, bacteria), and generally have 2 tightly bound zinc atoms per subunit. The active site zinc is coordinated by a histidine, two cysteines, and a water molecule. The second zinc seems to play a structural role, affects subunit interactions, and is typically coordinated by 4 cysteines. Length = 341

>gnl|CDD|176220 cd08259, Zn_ADH5, Alcohol dehydrogenases of the MDR family

 Score =  155 bits (394), Expect = 2e-44
 Identities = 100/329 (30%), Positives = 159/329 (48%), Gaps = 30/329 (9%)

Query: 29  LKIQPFELPSLGPYDVLVRMKAVGICGSDVHYLKTLRCADFVVKEPMVIGHECAGVIEKV 88
           L+I+    P  GP +VL+++KA G+C  D+ + K         K P+++GHE  G +E+V
Sbjct: 13  LQIEEVPDPEPGPGEVLIKVKAAGVCYRDLLFWKGFFPR---GKYPLILGHEIVGTVEEV 69

Query: 89  GSEVKTLVPGDRVALEPGISCWRCDHCKGGRYNLCPEMKFFATPPVHGSLANQVVHPADL 148
           G  V+   PGDRV L   I C +C++C  G  NLC     +    V G  A  V  P   
Sbjct: 70  GEGVERFKPGDRVILYYYIPCGKCEYCLSGEENLCRNRAEYGE-EVDGGFAEYVKVPERS 128

Query: 149 CFKLPDNVSLEEGA--MCEPLSVGLHACRRANIGPETNVLIMGAGP---IGLVTMLGAPR 203
             KLPDNVS E  A   C  +   +HA +RA +     VL+ GAG    I  + +    +
Sbjct: 129 LVKLPDNVSDESAALAAC-VVGTAVHALKRAGVKKGDTVLVTGAGGGVGIHAIQLA---K 184

Query: 204 AFGAPRIVIVDVDDYRLSVAKEIGADNIVKVSTNLQDIAEEVEKIQKAMGTGIDVSFDCA 263
           A GA R++ V     +L + KE+GAD ++  S      +E+V+K+      G DV  +  
Sbjct: 185 ALGA-RVIAVTRSPEKLKILKELGADYVIDGS----KFSEDVKKL-----GGADVVIELV 234

Query: 264 GLNKTMSTALGATCAGGKVCLVG-MGHHEMTVPLTPAAVREVDVVGVFRY-KNTWPLCLE 321
           G + T+  +L +   GG++ L+G +      +      ++E+ ++G     K      L+
Sbjct: 235 G-SPTIEESLRSLNKGGRLVLIGNVTPDPAPLRPGLLILKEIRIIGSISATKADVEEALK 293

Query: 322 LLRSGKIDVKPLVTHRFGFSQKEVEEAFE 350
           L++ GKI  KP++          + EA E
Sbjct: 294 LVKEGKI--KPVIDRVVSLED--INEALE 318

NAD(P)(H)-dependent oxidoreductases are the major enzymes in the interconversion of alcohols and aldehydes, or ketones. This group contains proteins that share the characteristic catalytic and structural zinc-binding sites of the zinc-dependent alcohol dehydrogenase family. Alcohol dehydrogenase in the liver converts ethanol and NAD+ to acetaldehyde and NADH, while in yeast and some other microorganisms ADH catalyzes the conversion acetaldehyde to ethanol in alcoholic fermentation. ADH is a member of the medium chain alcohol dehydrogenase family (MDR), which have a NAD(P)(H)-binding domain in a Rossmann fold of a beta-alpha form. The NAD(H)-binding region is comprised of 2 structurally similar halves, each of which contacts a mononucleotide. A GxGxxG motif after the first mononucleotide contact half allows the close contact of the coenzyme with the ADH backbone. The N-terminal catalytic domain has a distant homology to GroES. These proteins typically form dimers (typically higher plants, mammals) or tetramers (yeast, bacteria), and have 2 tightly bound zinc atoms per subunit, a catalytic zinc at the active site and a structural zinc in a lobe of the catalytic domain. NAD(H)-binding occurs in the cleft between the catalytic and coenzyme-binding domains at the active site, and coenzyme binding induces a conformational closing of this cleft. Coenzyme binding typically precedes and contributes to substrate binding. In human ADH catalysis, the zinc ion helps coordinate the alcohol, followed by deprotonation of a histidine (His-51), the ribose of NAD, a serine (Ser-48), then the alcohol, which allows the transfer of a hydride to NAD+, creating NADH and a zinc-bound aldehyde or ketone. In yeast and some bacteria, the active site zinc binds an aldehyde, polarizing it, and leading to the reverse reaction. Length = 332

>gnl|CDD|176243 cd08283, FDH_like_1, Glutathione-dependent formaldehyde dehydrogenase related proteins, child 1

 Score =  155 bits (395), Expect = 6e-44
 Identities = 112/376 (29%), Positives = 166/376 (44%), Gaps = 73/376 (19%)

Query: 41  PYDVLVRMKAVGICGSDVH----YLKTLRCADFVVKEPMVIGHECAGVIEKVGSEVKTLV 96
           P D +VR+ A  ICGSD+H    Y+  +       K+  ++GHE  GV+E+VG EV+ L 
Sbjct: 25  PTDAIVRVTATAICGSDLHLYHGYIPGM-------KKGDILGHEFMGVVEEVGPEVRNLK 77

Query: 97  PGDRVALEPGISCWRCDHCKGGRYNLC------PEMK---------FF----ATPPVHGS 137
            GDRV +   I+C  C +CK G Y+ C       EM           F     T    G 
Sbjct: 78  VGDRVVVPFTIACGECFYCKRGLYSQCDNTNPSAEMAKLYGHAGAGIFGYSHLTGGYAGG 137

Query: 138 LANQVVHP-ADL-CFKLPDNVSLEEGA-MCEPLSVGLHACRRANIGPETNVLIMGAGPIG 194
            A  V  P AD+  FK+PD++S E+   + + L  G HA   A + P   V + G GP+G
Sbjct: 138 QAEYVRVPFADVGPFKIPDDLSDEKALFLSDILPTGYHAAELAEVKPGDTVAVWGCGPVG 197

Query: 195 LVTMLGAPRAFGAPRIVIVDVDDYRLSVAKE-IGADNIVKVSTNLQDIAEEVEKIQKAMG 253
           L     A +  GA R++ +D    RL +A+  +GA+ I      + D+ E + ++    G
Sbjct: 198 LFAARSA-KLLGAERVIAIDRVPERLEMARSHLGAETINF--EEVDDVVEALRELTG--G 252

Query: 254 TGIDVSFDCAG-------LNKTMSTALG--------------ATCAGGKVCLVG--MGHH 290
            G DV  D  G       L+K     L               A   GG V ++G   G  
Sbjct: 253 RGPDVCIDAVGMEAHGSPLHKAEQALLKLETDRPDALREAIQAVRKGGTVSIIGVYGGTV 312

Query: 291 EMTVPLTPAAVREVDVVG----VFRYKNTWPLCLELLRSGKIDVKPLVTHRFGFSQKEVE 346
               P+  A  + + +      V RY    P  LEL+ SG++D   ++THR      +  
Sbjct: 313 N-KFPIGAAMNKGLTLRMGQTHVQRY---LPRLLELIESGELDPSFIITHRLPLE--DAP 366

Query: 347 EAFET-SARGGTAIKV 361
           EA++    +    IKV
Sbjct: 367 EAYKIFDKKEDGCIKV 382

Members identified as glutathione-dependent formaldehyde dehydrogenase(FDH), a member of the zinc-dependent/medium chain alcohol dehydrogenase family. FDH converts formaldehyde and NAD(P) to formate and NAD(P)H. The initial step in this process the spontaneous formation of a S-(hydroxymethyl)glutathione adduct from formaldehyde and glutathione, followed by FDH-mediated oxidation (and detoxification) of the adduct to S-formylglutathione. MDH family uses NAD(H) as a cofactor in the interconversion of alcohols and aldehydes, or ketones. Like many zinc-dependent alcohol dehydrogenases (ADH) of the medium chain alcohol dehydrogenase/reductase family (MDR), these FDHs form dimers, with 4 zinc ions per dimer. The medium chain alcohol dehydrogenase family (MDR) has a NAD(P)(H)-binding domain in a Rossmann fold of a beta-alpha form. The N-terminal region typically has an all-beta catalytic domain. These proteins typically form dimers (typically higher plants, mammals) or tetramers (yeast, bacteria), and have 2 tightly bound zinc atoms per subunit. Length = 386

>gnl|CDD|182229 PRK10083, PRK10083, putative oxidoreductase; Provisional

 Score =  151 bits (384), Expect = 5e-43
 Identities = 95/328 (28%), Positives = 152/328 (46%), Gaps = 20/328 (6%)

Query: 27  NTLKIQPFELPSLGPYDVLVRMKAVGICGSDVHYLKTLRCADFVVKEPMVIGHECAGVIE 86
           N+L I+   +P     +V V++K  GICGSD H     R  +   K P VIGHE  GVI+
Sbjct: 10  NSLAIEERPIPQPAAGEVRVKVKLAGICGSDSH---IYRGHNPFAKYPRVIGHEFFGVID 66

Query: 87  KVGSEVKTLVPGDRVALEPGISCWRCDHCKGGRYNLCPEMKFFATPPVH--GSLANQVVH 144
            VG  V     G+RVA++P ISC  C  C  G+ N+C  +       VH  G  +   V 
Sbjct: 67  AVGEGVDAARIGERVAVDPVISCGHCYPCSIGKPNVCTSLVVLG---VHRDGGFSEYAVV 123

Query: 145 PADLCFKLPDNVSLEEGAMCEPLSVGLHACRRANIGPETNVLIMGAGPIGLVTMLGAPRA 204
           PA    ++PD ++ +   M EP ++  +   R     +   LI GAGP+GL  +      
Sbjct: 124 PAKNAHRIPDAIADQYAVMVEPFTIAANVTGRTGPTEQDVALIYGAGPVGLTIVQVLKGV 183

Query: 205 FGAPRIVIVDVDDYRLSVAKEIGADNIVKVSTNLQDIAEEVEKIQKAMGTGIDVS--FDC 262
           +    +++ D  D RL++AKE GAD ++  +   + + E +E+       GI  +   D 
Sbjct: 184 YNVKAVIVADRIDERLALAKESGADWVINNAQ--EPLGEALEE------KGIKPTLIIDA 235

Query: 263 AGLNKTMSTALGATCAGGKVCLVGMGHHEMTVPLTPAAVREVDVVGVFRYKNTWPLCLEL 322
           A     +  A+       ++ L+G       +       +E+ +       N +P+ ++ 
Sbjct: 236 ACHPSILEEAVTLASPAARIVLMGFSSEPSEIVQQGITGKELSIFSSRLNANKFPVVIDW 295

Query: 323 LRSGKIDVKPLVTHRFGFSQKEVEEAFE 350
           L  G ID + L+TH F F  + V +A E
Sbjct: 296 LSKGLIDPEKLITHTFDF--QHVADAIE 321

Length = 339

>gnl|CDD|182371 PRK10309, PRK10309, galactitol-1-phosphate dehydrogenase; Provisional

 Score =  151 bits (384), Expect = 6e-43
 Identities = 100/319 (31%), Positives = 160/319 (50%), Gaps = 45/319 (14%)

Query: 41  PYDVLVRMKAVGICGSDV--------HYLKTLRCADFVVKEPMVIGHECAGVIEKVGSEV 92
             DVLV++ + G+CGSD+        HY             P+ +GHE +G +E VGS V
Sbjct: 25  QDDVLVKVASSGLCGSDIPRIFKNGAHYY------------PITLGHEFSGYVEAVGSGV 72

Query: 93  KTLVPGDRVALEPGISCWRCDHCKGGRYNLCPEMKFFATPPVHGSLANQVVHPADLCFKL 152
             L PGD VA  P + C+ C  C  G Y+LC +  F  +    G+    VV   +L F L
Sbjct: 73  DDLHPGDAVACVPLLPCFTCPECLRGFYSLCAKYDFIGSRRDGGNAEYIVVKRKNL-FAL 131

Query: 153 PDNVSLEEGAMCEPLSVGLHACRRANIGPETNVLIMGAGPIGLVTMLGAPRAFGAPRIVI 212
           P ++ +E+GA  EP++VGLHA   A      NV+I+GAG IGL+ +  A  A GA  +  
Sbjct: 132 PTDMPIEDGAFIEPITVGLHAFHLAQGCEGKNVIIIGAGTIGLLAIQCA-VALGAKSVTA 190

Query: 213 VDVDDYRLSVAKEIGADNIVKVSTNLQDIAEEVEKIQKAMGTGIDVSFD-----CAGLNK 267
           +D++  +L++AK +GA        N ++++    +IQ  +    ++ FD      AG+ +
Sbjct: 191 IDINSEKLALAKSLGAMQTF----NSREMS--APQIQSVLR---ELRFDQLILETAGVPQ 241

Query: 268 TMSTALGATCAGGKVCLVGMGHHEMTVPLTPAAV---REVDVVGVF-RYKNTWP-----L 318
           T+  A+       ++ LVG  HH++ +          +E+ V+G +  Y + WP      
Sbjct: 242 TVELAIEIAGPRAQLALVGTLHHDLHLTSATFGKILRKELTVIGSWMNYSSPWPGQEWET 301

Query: 319 CLELLRSGKIDVKPLVTHR 337
              LL   K+ ++PL+ HR
Sbjct: 302 ASRLLTERKLSLEPLIAHR 320

Length = 347

>gnl|CDD|176226 cd08265, Zn_ADH3, Alcohol dehydrogenases of the MDR family

 Score =  152 bits (386), Expect = 7e-43
 Identities = 99/341 (29%), Positives = 165/341 (48%), Gaps = 23/341 (6%)

Query: 29  LKIQPFELPSLGPYDVLVRMKAVGICGSDVHYLKTLRCADF----VVKEPMVIGHECAGV 84
           L+++   +P+L P ++L+R+KA GICGSD+H  +T +        + + P+VIGHE +GV
Sbjct: 39  LRVEDVPVPNLKPDEILIRVKACGICGSDIHLYETDKDGYILYPGLTEFPVVIGHEFSGV 98

Query: 85  IEKVGSEVKTLVPGDRVALEPGISCWRCDHCKGGRYNLCPEMKFFATPPVHGSLANQVVH 144
           +EK G  VK    GD V  E  + C  C  C+ G  N C  +K        G+ A  +  
Sbjct: 99  VEKTGKNVKNFEKGDPVTAEEMMWCGMCRACRSGSPNHCKNLKELGF-SADGAFAEYIAV 157

Query: 145 PADLCFKLPDNV-------SLEEGAMCEPLSVGLHAC--RRANIGPETNVLIMGAGPIGL 195
            A   +++ +         + E GA+ EP SV  +    R     P   V++ GAGPIGL
Sbjct: 158 NARYAWEINELREIYSEDKAFEAGALVEPTSVAYNGLFIRGGGFRPGAYVVVYGAGPIGL 217

Query: 196 VTMLGAPRAFGAPRIVIVDVDDYRLSVAKEIGADNIVKVSTNLQDIAEEVEKIQKAM-GT 254
             +  A +A GA +++  ++ + R ++AKE+GAD +   +          EK+ +   G 
Sbjct: 218 AAIALA-KAAGASKVIAFEISEERRNLAKEMGADYV--FNPTKMRDCLSGEKVMEVTKGW 274

Query: 255 GIDVSFDCAGLNKTMSTALGATCA-GGKVCLVGMGHHEMTVPLTPAAVREVDVVGVFRYK 313
           G D+  + AG        +  + A  GK+  +G     + + L    VR   +VG   + 
Sbjct: 275 GADIQVEAAGAPPATIPQMEKSIAINGKIVYIGRAATTVPLHLEVLQVRRAQIVGAQGHS 334

Query: 314 N--TWPLCLELLRSGKIDVKPLVTHRFGFSQKEVEEAFETS 352
               +P  ++L+ SGKID+  ++T RF      + EA + +
Sbjct: 335 GHGIFPSVIKLMASGKIDMTKIITARFPLE--GIMEAIKAA 373

This group resembles the zinc-dependent alcohol dehydrogenase and has the catalytic and structural zinc-binding sites characteristic of this group. The medium chain dehydrogenases/reductase (MDR)/zinc-dependent alcohol dehydrogenase-like family, which contains the zinc-dependent alcohol dehydrogenase (ADH-Zn) and related proteins, is a diverse group of proteins related to the first identified member, class I mammalian ADH. MDRs display a broad range of activities and are distinguished from the smaller short chain dehydrogenases (~ 250 amino acids vs. the ~ 350 amino acids of the MDR). The MDR proteins have 2 domains: a C-terminal NAD(P) binding-Rossmann fold domain of a beta-alpha form and an N-terminal catalytic domain with distant homology to GroES. The MDR group contains a host of activities, including the founding alcohol dehydrogenase (ADH), quinone reductase, sorbitol dehydrogenase, formaldehyde dehydrogenase, butanediol DH, ketose reductase, cinnamyl reductase, and numerous others. The zinc-dependent alcohol dehydrogenases (ADHs) catalyze the NAD(P)(H)-dependent interconversion of alcohols to aldehydes or ketones. Active site zinc has a catalytic role, while structural zinc aids in stability. ADH-like proteins typically form dimers (typically higher plants, mammals) or tetramers (yeast, bacteria), and generally have 2 tightly bound zinc atoms per subunit. The active site zinc is coordinated by a histidine, two cysteines, and a water molecule. The second zinc seems to play a structural role, affects subunit interactions, and is typically coordinated by 4 cysteines. Other MDR members have only a catalytic zinc, and some contain no coordinated zinc. Length = 384

>gnl|CDD|176182 cd05279, Zn_ADH1, Liver alcohol dehydrogenase and related zinc-dependent alcohol dehydrogenases

 Score =  151 bits (384), Expect = 1e-42
 Identities = 95/361 (26%), Positives = 155/361 (42%), Gaps = 44/361 (12%)

Query: 29  LKIQPFELPSLGPYDVLVRMKAVGICGSDVHYLKTLRCADFVVKEPMVIGHECAGVIEKV 88
           L I+  E+      +V +++ A G+C +D+H +            P+++GHE AG++E +
Sbjct: 13  LSIEEIEVAPPKAGEVRIKVVATGVCHTDLHVID----GKLPTPLPVILGHEGAGIVESI 68

Query: 89  GSEVKTLVPGDRVALEPGISCWRCDHCKGGRYNLCPEMKFFATP---------------- 132
           G  V TL PGD+V    G  C +C  C   R NLC   K   T                 
Sbjct: 69  GPGVTTLKPGDKVIPLFGPQCGKCKQCLNPRPNLC--SKSRGTNGRGLMSDGTSRFTCKG 126

Query: 133 -PVH-----GSLANQVVHPADLCFKLPDNVSLEEGAM--CEPLSVGLHAC-RRANIGPET 183
            P+H      + A   V       K+  +  LE+  +  C   S G  A    A + P +
Sbjct: 127 KPIHHFLGTSTFAEYTVVSEISLAKIDPDAPLEKVCLIGCG-FSTGYGAAVNTAKVTPGS 185

Query: 184 NVLIMGAGPIGLVTMLGAPRAFGAPRIVIVDVDDYRLSVAKEIGADNIVKVSTNLQDIAE 243
              + G G +GL  ++G  +A GA RI+ VD++  +   AK++GA   +      + I  
Sbjct: 186 TCAVFGLGGVGLSVIMGC-KAAGASRIIAVDINKDKFEKAKQLGATECINPRDQDKPI-- 242

Query: 244 EVEKIQKAMGTGIDVSFDCAGLNKTMSTALGAT-CAGGKVCLVGMGHHEMTVPLTPAAVR 302
            VE + +    G+D +F+  G   T+  AL AT   GG   +VG+        L P  + 
Sbjct: 243 -VEVLTEMTDGGVDYAFEVIGSADTLKQALDATRLGGGTSVVVGVPPSGTEATLDPNDLL 301

Query: 303 E-----VDVVGVFRYKNTWPLCLELLRSGKIDVKPLVTHRFGFSQKEVEEAFETSARGGT 357
                   V G ++ K++ P  + L R  K  +  L+TH   F  +E+ + F+    G +
Sbjct: 302 TGRTIKGTVFGGWKSKDSVPKLVALYRQKKFPLDELITHVLPF--EEINDGFDLMRSGES 359

Query: 358 A 358
            
Sbjct: 360 I 360

NAD(P)(H)-dependent oxidoreductases are the major enzymes in the interconversion of alcohols and aldehydes, or ketones. Alcohol dehydrogenase in the liver converts ethanol and NAD+ to acetaldehyde and NADH, while in yeast and some other microorganisms ADH catalyzes the conversion acetaldehyde to ethanol in alcoholic fermentation. There are 7 vertebrate ADH 7 classes, 6 of which have been identified in humans. Class III, glutathione-dependent formaldehyde dehydrogenase, has been identified as the primordial form and exists in diverse species, including plants, micro-organisms, vertebrates, and invertebrates. Class I, typified by liver dehydrogenase, is an evolving form. Gene duplication and functional specialization of ADH into ADH classes and subclasses created numerous forms in vertebrates. For example, the A, B and C (formerly alpha, beta, gamma) human class I subunits have high overall structural similarity, but differ in the substrate binding pocket and therefore in substrate specificity. In human ADH catalysis, the zinc ion helps coordinate the alcohol, followed by deprotonation of a histidine (His-51), the ribose of NAD, a serine (Ser-48), then the alcohol, which allows the transfer of a hydride to NAD+, creating NADH and a zinc-bound aldehyde or ketone. In yeast and some bacteria, the active site zinc binds an aldehyde, polarizing it, and leading to the reverse reaction. ADH is a member of the medium chain alcohol dehydrogenase family (MDR), which has a NAD(P)(H)-binding domain in a Rossmann fold of an beta-alpha form. The NAD(H)-binding region is comprised of 2 structurally similar halves, each of which contacts a mononucleotide. A GxGxxG motif after the first mononucleotide contact half allows the close contact of the coenzyme with the ADH backbone. The N-terminal catalytic domain has a distant homology to GroES. These proteins typically form dimers (typically higher plants, mammals) or tetramers (yeast, bacteria), and have 2 tightly bound zinc atoms per subunit, a catalytic zinc at the active site and a structural zinc in a lobe of the catalytic domain. NAD(H) binding occurs in the cleft between the catalytic and coenzyme-binding domains at the active site, and coenzyme binding induces a conformational closing of this cleft. Coenzyme binding typically precedes and contributes to substrate binding. Length = 365

>gnl|CDD|176224 cd08263, Zn_ADH10, Alcohol dehydrogenases of the MDR family

 Score =  150 bits (381), Expect = 3e-42
 Identities = 107/365 (29%), Positives = 171/365 (46%), Gaps = 47/365 (12%)

Query: 29  LKIQPFELPSLGPYDVLVRMKAVGICGSDVHYLKTLRCADFVVKEPMVIGHECAGVIEKV 88
           L I+   +P     ++L+R+ A G+C SD+H LK     +     P V+GHE +G + +V
Sbjct: 13  LTIEEIPVPRPKEGEILIRVAACGVCHSDLHVLK----GELPFPPPFVLGHEISGEVVEV 68

Query: 89  GSEVK---TLVPGDRVALEPGISCWRCDHCKGGRYNLCPEMKFFA--------------- 130
           G  V+    L  GDRV     + C +C +C  G+ NLC    FFA               
Sbjct: 69  GPNVENPYGLSVGDRVVGSFIMPCGKCRYCARGKENLCE--DFFAYNRLKGTLYDGTTRL 126

Query: 131 ----TPPVH----GSLANQVVHPADLCFKLPDNVSLEEGAM--CEPLSVGLHACRRAN-I 179
                 PV+    G LA   V PA     LP+++   E A+  C   +    A + A  +
Sbjct: 127 FRLDGGPVYMYSMGGLAEYAVVPATALAPLPESLDYTESAVLGCAGFT-AYGALKHAADV 185

Query: 180 GPETNVLIMGAGPIGLVTMLGAPRAFGAPRIVIVDVDDYRLSVAKEIGADNIVKVSTNLQ 239
            P   V ++G G +G  + +   +AFGA  I+ VDV D +L+ AKE+GA +   V+   +
Sbjct: 186 RPGETVAVIGVGGVGS-SAIQLAKAFGASPIIAVDVRDEKLAKAKELGATHT--VNAAKE 242

Query: 240 DIAEEVEKIQKAMGTGIDVSFDCAGLNKTMSTALGATCAGGKVCLVGMGHHEMT--VPLT 297
           D    + +I    G G+DV  +  G  +T   AL     GG+  +VG+     T  +P+T
Sbjct: 243 DAVAAIREI--TGGRGVDVVVEALGKPETFKLALDVVRDGGRAVVVGLAPGGATAEIPIT 300

Query: 298 PAAVREVDVVGVFRYK--NTWPLCLELLRSGKIDVKPLVTHRFGFSQKEVEEAFETSARG 355
               R + ++G +  +     P  + L  SGK+D + LVTH++    +E+ EA+E   +G
Sbjct: 301 RLVRRGIKIIGSYGARPRQDLPELVGLAASGKLDPEALVTHKYKL--EEINEAYENLRKG 358

Query: 356 GTAIK 360
               +
Sbjct: 359 LIHGR 363

NAD(P)(H)-dependent oxidoreductases are the major enzymes in the interconversion of alcohols and aldehydes, or ketones. Alcohol dehydrogenase in the liver converts ethanol and NAD+ to acetaldehyde and NADH, while in yeast and some other microorganisms ADH catalyzes the conversion acetaldehyde to ethanol in alcoholic fermentation. ADH is a member of the medium chain alcohol dehydrogenase family (MDR), which have a NAD(P)(H)-binding domain in a Rossmann fold of a beta-alpha form. The NAD(H)-binding region is comprised of 2 structurally similar halves, each of which contacts a mononucleotide. A GxGxxG motif after the first mononucleotide contact half allows the close contact of the coenzyme with the ADH backbone. The N-terminal catalytic domain has a distant homology to GroES. These proteins typically form dimers (typically higher plants, mammals) or tetramers (yeast, bacteria), and have 2 tightly bound zinc atoms per subunit, a catalytic zinc at the active site and a structural zinc in a lobe of the catalytic domain. NAD(H)-binding occurs in the cleft between the catalytic and coenzyme-binding domains at the active site, and coenzyme binding induces a conformational closing of this cleft. Coenzyme binding typically precedes and contributes to substrate binding. In human ADH catalysis, the zinc ion helps coordinate the alcohol, followed by deprotonation of a histidine, the ribose of NAD, a serine, then the alcohol, which allows the transfer of a hydride to NAD+, creating NADH and a zinc-bound aldehyde or ketone. In yeast and some bacteria, the active site zinc binds an aldehyde, polarizing it, and leading to the reverse reaction. Length = 367

>gnl|CDD|176221 cd08260, Zn_ADH6, Alcohol dehydrogenases of the MDR family

 Score =  148 bits (376), Expect = 1e-41
 Identities = 105/356 (29%), Positives = 162/356 (45%), Gaps = 51/356 (14%)

Query: 29  LKIQPFELPSLGPYDVLVRMKAVGICGSDVHYLKTLRCADFVVKEPMVIGHECAGVIEKV 88
           L+I+    P   P  V+V ++A G+C SD H     +  D  V  P V GHE AGV+ +V
Sbjct: 13  LEIREVPDPEPPPDGVVVEVEACGVCRSDWH---GWQGHDPDVTLPHVPGHEFAGVVVEV 69

Query: 89  GSEVKTLVPGDRVALEPGISCWRCDHCKGGRYNLCPEMKFFATPP---VHGSLANQV-VH 144
           G +V     GDRV +   + C  C +C+ G  N+C         P     GS A  V V 
Sbjct: 70  GEDVSRWRVGDRVTVPFVLGCGTCPYCRAGDSNVCEHQ----VQPGFTHPGSFAEYVAVP 125

Query: 145 PADL-CFKLPDNVSLEEGAMCEPLSVGLHACR----------RANIGPETNVLIMGAGPI 193
            AD+   +LPD+V     A      +G   CR          +A + P   V + G G +
Sbjct: 126 RADVNLVRLPDDVDFVTAA-----GLG---CRFATAFRALVHQARVKPGEWVAVHGCGGV 177

Query: 194 GL-VTMLGAPRAFGAPRIVIVDVDDYRLSVAKEIGADNIVKVSTNLQDIAEEVEKIQKAM 252
           GL   M+    A GA R++ VD+DD +L +A+E+GA   V  ++ ++D+A  V  +    
Sbjct: 178 GLSAVMIA--SALGA-RVIAVDIDDDKLELARELGAVATVN-ASEVEDVAAAVRDL---T 230

Query: 253 GTGIDVSFDCAGLNKTMSTALGATCAGGKVCLVGM---GHHEMTVPLTPAAVREVDVVGV 309
           G G  VS D  G+ +T   ++ +    G+   VG+       + +P+     RE+++VG 
Sbjct: 231 GGGAHVSVDALGIPETCRNSVASLRKRGRHVQVGLTLGEEAGVALPMDRVVARELEIVGS 290

Query: 310 F-----RYKNTWPLCLELLRSGKIDVKPLVTHRFGFSQ-KEVEEAFETSARGGTAI 359
                 RY       L L+ SGK+D +PLV       +  +   A +  A  G  +
Sbjct: 291 HGMPAHRY----DAMLALIASGKLDPEPLVGRTISLDEAPDALAAMDDYATAGITV 342

NAD(P)(H)-dependent oxidoreductases are the major enzymes in the interconversion of alcohols and aldehydes, or ketones. This group has the characteristic catalytic and structural zinc sites of the zinc-dependent alcohol dehydrogenases. Alcohol dehydrogenase in the liver converts ethanol and NAD+ to acetaldehyde and NADH, while in yeast and some other microorganisms ADH catalyzes the conversion acetaldehyde to ethanol in alcoholic fermentation. ADH is a member of the medium chain alcohol dehydrogenase family (MDR), which has a NAD(P)(H)-binding domain in a Rossmann fold of a beta-alpha form. The NAD(H)-binding region is comprised of 2 structurally similar halves, each of which contacts a mononucleotide. A GxGxxG motif after the first mononucleotide contact half allows the close contact of the coenzyme with the ADH backbone. The N-terminal catalytic domain has a distant homology to GroES. These proteins typically form dimers (typically higher plants, mammals) or tetramers (yeast, bacteria), and have 2 tightly bound zinc atoms per subunit, a catalytic zinc at the active site and a structural zinc in a lobe of the catalytic domain. NAD(H)-binding occurs in the cleft between the catalytic and coenzyme-binding domains at the active site, and coenzyme binding induces a conformational closing of this cleft. Coenzyme binding typically precedes and contributes to substrate binding. In human ADH catalysis, the zinc ion helps coordinate the alcohol, followed by deprotonation of a histidine, the ribose of NAD, a serine, then the alcohol, which allows the transfer of a hydride to NAD+, creating NADH and a zinc-bound aldehyde or ketone. In yeast and some bacteria, the active site zinc binds an aldehyde, polarizing it, and leading to the reverse reaction. Length = 345

>gnl|CDD|176230 cd08269, Zn_ADH9, Alcohol dehydrogenases of the MDR family

 Score =  142 bits (361), Expect = 8e-40
 Identities = 91/335 (27%), Positives = 139/335 (41%), Gaps = 44/335 (13%)

Query: 35  ELPSLGPYDVLVRMKAVGICGSDVHYLKTLRCADFVVKEPMVIGHECAGVIEKVGSEVKT 94
             P+ GP  VLVR++  G+CGSD+      R       EP   GHE  G +  +G  V+ 
Sbjct: 13  PRPTPGPGQVLVRVEGCGVCGSDLPAFNQGRPWFVYPAEPGGPGHEGWGRVVALGPGVRG 72

Query: 95  LVPGDRVALEPGISCWRCDHCKGGRYNLCPEMKFFATPPVHGSLANQVVHPADLCFKLPD 154
           L  GDRVA   G                             G+ A   +  AD    LP 
Sbjct: 73  LAVGDRVAGLSG-----------------------------GAFAEYDLADADHAVPLPS 103

Query: 155 NVSLEEGAMCEPLSVGLHACRRANIGPETNVLIMGAGPIGLVTMLGAPRAFGAPRIVIVD 214
                +    EPL   L+  RR  I     V ++GAG IGL+  L    A GA R++ +D
Sbjct: 104 L-LDGQAFPGEPLGCALNVFRRGWIRAGKTVAVIGAGFIGLL-FLQLAAAAGARRVIAID 161

Query: 215 VDDYRLSVAKEIGADNIVKVSTNLQDIAEEVEKIQKAMGTGIDVSFDCAGLNKTMSTALG 274
               RL++A+E+GA  +V   +  + I E V ++    G G DV  +  G    +  A  
Sbjct: 162 RRPARLALARELGATEVVTDDS--EAIVERVRELTG--GAGADVVIEAVGHQWPLDLAGE 217

Query: 275 ATCAGGKVCLVGMGHHEM-TVPLTPAAVREVDVVG-VFR----YKNTWPLCLELLRSGKI 328
                G++ + G        VP      + +D++  V R            ++L+  G++
Sbjct: 218 LVAERGRLVIFGYHQDGPRPVPFQTWNWKGIDLINAVERDPRIGLEGMREAVKLIADGRL 277

Query: 329 DVKPLVTHRFGFSQKEVEEAFETSARGG-TAIKVM 362
           D+  L+TH F    +E+ +AFE + R     IK +
Sbjct: 278 DLGSLLTHEFPL--EELGDAFEAARRRPDGFIKGV 310

The medium chain dehydrogenases/reductase (MDR)/zinc-dependent alcohol dehydrogenase-like family, which contains the zinc-dependent alcohol dehydrogenase (ADH-Zn) and related proteins, is a diverse group of proteins related to the first identified member, class I mammalian ADH. MDRs display a broad range of activities and are distinguished from the smaller short chain dehydrogenases (~ 250 amino acids vs. the ~ 350 amino acids of the MDR). The MDR proteins have 2 domains: a C-terminal NAD(P)-binding Rossmann fold domain of a beta-alpha form and an N-terminal catalytic domain with distant homology to GroES. The MDR group contains a host of activities, including the founding alcohol dehydrogenase (ADH), quinone reductase, sorbitol dehydrogenase, formaldehyde dehydrogenase, butanediol DH, ketose reductase, cinnamyl reductase, and numerous others. The zinc-dependent alcohol dehydrogenases (ADHs) catalyze the NAD(P)(H)-dependent interconversion of alcohols to aldehydes or ketones. Active site zinc has a catalytic role, while structural zinc aids in stability. Length = 312

>gnl|CDD|176202 cd08240, 6_hydroxyhexanoate_dh_like, 6-hydroxyhexanoate dehydrogenase

 Score =  143 bits (363), Expect = 1e-39
 Identities = 99/337 (29%), Positives = 153/337 (45%), Gaps = 29/337 (8%)

Query: 29  LKIQPFELPSLGPYDVLVRMKAVGICGSDVHYL---------KTLRCADFVVKEPMVIGH 79
           L+    + P     +VLV++ A G+C SD+H           KT+   D  VK P+V+GH
Sbjct: 13  LEEVEIDTPKPPGTEVLVKVTACGVCHSDLHIWDGGYDLGGGKTMSLDDRGVKLPLVLGH 72

Query: 80  ECAGVIEKVGSEVKTLVPGDRVALEPGISCWRCDHCKGGRYNLCPEMKFFATPPVHGSLA 139
           E  G +  VG +   +  GD+V + P I C  C  C  G  NLC + +        G  A
Sbjct: 73  EIVGEVVAVGPDAADVKVGDKVLVYPWIGCGECPVCLAGDENLCAKGRALGIFQ-DGGYA 131

Query: 140 NQVVHPADLCFKLPDNVSLEEGAMCEPLSVGL---HACRRAN-IGPETNVLIMGAGPIGL 195
             V+ P       P  +     A     S GL    A ++   +  +  V+I+GAG +GL
Sbjct: 132 EYVIVPHSRYLVDPGGLDPALAATL-ACS-GLTAYSAVKKLMPLVADEPVVIIGAGGLGL 189

Query: 196 VTMLGAPRAFGAPRIVIVDVDDYRLSVAKEIGADNIVKVSTNLQDIAEEVEKIQKAMGTG 255
           +  L   +A G   I++VD+D+ +L  AK  GAD +V    N  D  +  ++I KA G G
Sbjct: 190 MA-LALLKALGPANIIVVDIDEAKLEAAKAAGADVVV----NGSD-PDAAKRIIKAAGGG 243

Query: 256 IDVSFDCAGLNKTMSTALGATCAGGKVCLVGMGHHEMTVPLTPAAVREVDVVGVF--RYK 313
           +D   D    + T S A      GGK+ LVG+   E T+PL    +R + + G +    +
Sbjct: 244 VDAVIDFVNNSATASLAFDILAKGGKLVLVGLFGGEATLPLPLLPLRALTIQGSYVGSLE 303

Query: 314 NTWPLCLELLRSGKIDVKPLVTHRFGFSQKEVEEAFE 350
               L + L ++GK+   PL          +V +A +
Sbjct: 304 ELREL-VALAKAGKLKPIPLTER----PLSDVNDALD 335

6-hydroxyhexanoate dehydrogenase, an enzyme of the zinc-dependent alcohol dehydrogenase-like family of medium chain dehydrogenases/reductases catalyzes the conversion of 6-hydroxyhexanoate and NAD(+) to 6-oxohexanoate + NADH and H+. NAD(P)(H)-dependent oxidoreductases are the major enzymes in the interconversion of alcohols and aldehydes, or ketones. Alcohol dehydrogenase in the liver converts ethanol and NAD+ to acetaldehyde and NADH, while in yeast and some other microorganisms ADH catalyzes the conversion acetaldehyde to ethanol in alcoholic fermentation. ADH is a member of the medium chain alcohol dehydrogenase family (MDR), which has a NAD(P)(H)-binding domain in a Rossmann fold of a beta-alpha form. The NAD(H)-binding region is comprised of 2 structurally similar halves, each of which contacts a mononucleotide. A GxGxxG motif after the first mononucleotide contact half allows the close contact of the coenzyme with the ADH backbone. The N-terminal catalytic domain has a distant homology to GroES. These proteins typically form dimers (typically higher plants, mammals) or tetramers (yeast, bacteria), and have 2 tightly bound zinc atoms per subunit, a catalytic zinc at the active site and a structural zinc in a lobe of the catalytic domain. NAD(H)-binding occurs in the cleft between the catalytic and coenzyme-binding domains, at the active site, and coenzyme binding induces a conformational closing of this cleft. Coenzyme binding typically precedes and contributes to substrate binding. In human ADH catalysis, the zinc ion helps coordinate the alcohol, followed by deprotonation of a histidine, the ribose of NAD, a serine, then the alcohol, which allows the transfer of a hydride to NAD+, creating NADH and a zinc-bound aldehyde or ketone. In yeast and some bacteria, the active site zinc binds an aldehyde, polarizing it, and leading to the reverse reaction. Length = 350

>gnl|CDD|176241 cd08281, liver_ADH_like1, Zinc-dependent alcohol dehydrogenases (ADH) and class III ADG (AKA formaldehyde dehydrogenase)

 Score =  144 bits (364), Expect = 1e-39
 Identities = 105/357 (29%), Positives = 156/357 (43%), Gaps = 44/357 (12%)

Query: 29  LKIQPFELPSLGPYDVLVRMKAVGICGSDVHYLKTLRCADFVVKEPMVIGHECAGVIEKV 88
           L I+  EL   GP +VLV++ A G+C SD+  +   R        PM +GHE AGV+ +V
Sbjct: 21  LVIEEVELDPPGPGEVLVKIAAAGLCHSDLSVINGDR----PRPLPMALGHEAAGVVVEV 76

Query: 89  GSEVKTLVPGDRVALEPGISCWRCDHCKGGRYNLCP----------------EMKFFATP 132
           G  V  L  GD V L    SC  C  C  GR  LC                  ++     
Sbjct: 77  GEGVTDLEVGDHVVLVFVPSCGHCRPCAEGRPALCEPGAAANGAGTLLSGGRRLRLRGGE 136

Query: 133 PVH----GSLANQVVHPADLCFKLPDNVSLEEGAM--CEPLSVGLHACRRANIGPETNVL 186
             H     + A   V       K+  +V LE  A+  C  L+        A + P  +V 
Sbjct: 137 INHHLGVSAFAEYAVVSRRSVVKIDKDVPLEIAALFGCAVLTGVGAVVNTAGVRPGQSVA 196

Query: 187 IMGAGPIGLVTMLGAPRAFGAPRIVIVDVDDYRLSVAKEIGADNIVKVSTNLQDIAEEVE 246
           ++G G +GL  +LGA  A GA ++V VD+++ +L++A+E+GA   V            VE
Sbjct: 197 VVGLGGVGLSALLGA-VAAGASQVVAVDLNEDKLALARELGATATVNAGD-----PNAVE 250

Query: 247 KIQKAMGTGIDVSFDCAGLNKTMSTALGATCAGGKVCLVGMGH--HEMTVPLTPAAVREV 304
           ++++  G G+D +F+ AG    + TA   T  GG     G+      ++VP       E 
Sbjct: 251 QVRELTGGGVDYAFEMAGSVPALETAYEITRRGGTTVTAGLPDPEARLSVPALSLVAEER 310

Query: 305 DVVGVFRYKNTW------PLCLELLRSGKIDVKPLVTHRFGFSQKEVEEAFETSARG 355
            + G   Y  +       P  L L  SG++ V  L+THR      E+ E F+  A G
Sbjct: 311 TLKG--SYMGSCVPRRDIPRYLALYLSGRLPVDKLLTHRLPLD--EINEGFDRLAAG 363

NAD(P)(H)-dependent oxidoreductases are the major enzymes in the interconversion of alcohols and aldehydes or ketones. This group contains members identified as zinc dependent alcohol dehydrogenases (ADH), and class III ADG (aka formaldehyde dehydrogenase, FDH). Alcohol dehydrogenase in the liver converts ethanol and NAD+ to acetaldehyde and NADH, while in yeast and some other microorganisms ADH catalyzes the conversion acetaldehyde to ethanol in alcoholic fermentation. NAD(P)(H)-dependent oxidoreductases are the major enzymes in the interconversion of alcohols and aldehydes or ketones. Alcohol dehydrogenase in the liver converts ethanol and NAD+ to acetaldehyde and NADH, while in yeast and some other microorganisms ADH catalyzes the conversion acetaldehyde to ethanol in alcoholic fermentation. Class III ADH are also know as glutathione-dependent formaldehyde dehydrogenase (FDH), which convert aldehydes to the corresponding carboxylic acid and alcohol. ADH is a member of the medium chain alcohol dehydrogenase family (MDR), which have a NAD(P)(H)-binding domain in a Rossmann fold of a beta-alpha form. The NAD(H)-binding region is comprised of 2 structurally similar halves, each of which contacts a mononucleotide. A GxGxxG motif after the first mononucleotide contact half allows the close contact of the coenzyme with the ADH backbone. The N-terminal catalytic domain has a distant homology to GroES. These proteins typically form dimers (typically higher plants, mammals) or tetramers (yeast, bacteria), and have 2 tightly bound zinc atoms per subunit, a catalytic zinc at the active site and a structural zinc in a lobe of the catalytic domain. NAD(H) binding occurs in the cleft between the catalytic and coenzyme-binding domains at the active site, and coenzyme binding induces a conformational closing of this cleft. Coenzyme binding typically precedes and contributes to substrate binding. In human ADH catalysis, the zinc ion helps coordinate the alcohol, followed by deprotonation of a histidine, the ribose of NAD, a serine, then the alcohol, which allows the transfer of a hydride to NAD+, creating NADH and a zinc-bound aldehyde or ketone. In yeast and some bacteria, the active site zinc binds an aldehyde, polarizing it, and leading to the reverse reaction. Length = 371

>gnl|CDD|176204 cd08242, MDR_like, Medium chain dehydrogenases/reductase (MDR)/zinc-dependent alcohol dehydrogenase-like family

 Score =  141 bits (357), Expect = 4e-39
 Identities = 104/348 (29%), Positives = 147/348 (42%), Gaps = 37/348 (10%)

Query: 20  AAWLLGVNTLKIQPFELPSLGPYDVLVRMKAVGICGSDVHYLKTLRCADFVVKEPMVIGH 79
           A  L G   L+++    P   P + LVR+   GIC +D+   K           P V GH
Sbjct: 3   ALVLDGGLDLRVEDLPKPEPPPGEALVRVLLAGICNTDLEIYKGYY------PFPGVPGH 56

Query: 80  ECAGVIEKVGSEVKTLVPGDRVALEPGISCWRCDHCKGGRYNLCPEMKFFATPPVHGSLA 139
           E  G++E+       LV G RV  E  I+C RC++C+ G Y  CP           G+ A
Sbjct: 57  EFVGIVEEGPEA--ELV-GKRVVGEINIACGRCEYCRRGLYTHCPNRTVLGIVDRDGAFA 113

Query: 140 NQVVHPADLCFKLPDNVSLEEGAMCEPLSVGLHACRRANIGPETNVLIMGAGPIGLVTML 199
             +  P +    +PD V  E+    EPL+  L    +  I P   V ++G G +GL+   
Sbjct: 114 EYLTLPLENLHVVPDLVPDEQAVFAEPLAAALEILEQVPITPGDKVAVLGDGKLGLLIAQ 173

Query: 200 GAPRAFGAPRIVIVDVDDYRLSVAKEIGADNIVKVSTNLQDIAEEVEKIQKAMGTGIDVS 259
                 G P +V+V     +L++A+ +G      V T L D AE         G G DV 
Sbjct: 174 -VLALTG-PDVVLVGRHSEKLALARRLG------VETVLPDEAESE-------GGGFDVV 218

Query: 260 FDCAGLNKTMSTALGATCAGGKVCLVGMGHHEMTVPLTPAAVREVDVV----GVFRYKNT 315
            +  G    +  AL      G V L        +  LT A V E+ +V    G F     
Sbjct: 219 VEATGSPSGLELALRLVRPRGTVVLKSTYAGPASFDLTKAVVNEITLVGSRCGPF----- 273

Query: 316 WPLCLELLRSGKIDVKPLVTHRFGFSQKEVEEAFETSARGGTAIKVMF 363
               L LLR G +DV PL+T  +     E  EAFE +A  G  +KV+ 
Sbjct: 274 -APALRLLRKGLVDVDPLITAVYPLE--EALEAFERAAEPGA-LKVLL 317

This group contains members identified as related to zinc-dependent alcohol dehydrogenase and other members of the MDR family, including threonine dehydrogenase. The medium chain dehydrogenases/reductase (MDR)/zinc-dependent alcohol dehydrogenase-like family, which contains the zinc-dependent alcohol dehydrogenase (ADH-Zn) and related proteins, is a diverse group of proteins related to the first identified member, class I mammalian ADH. MDRs display a broad range of activities and are distinguished from the smaller short chain dehydrogenases (~ 250 amino acids vs. the ~ 350 amino acids of the MDR). The MDR proteins have 2 domains: a C-terminal NAD(P) binding-Rossmann fold domain of a beta-alpha form and an N-terminal catalytic domain with distant homology to GroES. The MDR group includes various activities, including the founding alcohol dehydrogenase (ADH), quinone reductase, sorbitol dehydrogenase, formaldehyde dehydrogenase, butanediol DH, ketose reductase, cinnamyl reductase, and numerous others. The zinc-dependent alcohol dehydrogenases (ADHs) catalyze the NAD(P)(H)-dependent interconversion of alcohols to aldehydes or ketones. Active site zinc has a catalytic role, while structural zinc aids in stability. ADH-like proteins typically form dimers (typically higher plants, mammals) or tetramers (yeast, bacteria), and generally have 2 tightly bound zinc atoms per subunit. The active site zinc is coordinated by a histidine, two cysteines, and a water molecule. The second zinc seems to play a structural role, affects subunit interactions, and is typically coordinated by 4 cysteines. Length = 319

>gnl|CDD|176207 cd08245, CAD, Cinnamyl alcohol dehydrogenases (CAD) and related proteins

 Score =  140 bits (354), Expect = 1e-38
 Identities = 92/338 (27%), Positives = 146/338 (43%), Gaps = 36/338 (10%)

Query: 28  TLKIQPFELPSLGPYDVLVRMKAVGICGSDVHYLKTLRCADFVVKEPMVIGHECAGVIEK 87
            L+ +   +P  GP +VL++++A G+C +D+H            K P+V GHE  G + +
Sbjct: 11  PLEPEEVPVPEPGPGEVLIKIEACGVCHTDLH---AAEGDWGGSKYPLVPGHEIVGEVVE 67

Query: 88  VGSEVKTLVPGDRVALEPGI-----SCWRCDHCKGGRYNLCPEMKFFATPPVH-GSLANQ 141
           VG+ V+    GDRV    G+     SC RC++C+ G  NLC +     T     G  A  
Sbjct: 68  VGAGVEGRKVGDRV----GVGWLVGSCGRCEYCRRGLENLCQKAVN--TGYTTQGGYAEY 121

Query: 142 VVHPADLCFKLPDNVSLEEGA--MCEPLSVGLHACRRANIGPETNVLIMGAGPIGLVTML 199
           +V  A+    LPD + L + A  +C  ++V   A R A   P   V ++G G +G + + 
Sbjct: 122 MVADAEYTVLLPDGLPLAQAAPLLCAGITV-YSALRDAGPRPGERVAVLGIGGLGHLAVQ 180

Query: 200 GAPRAFGAPRIVIVDVDDYRLSVAKEIGADNIVKVSTNLQDIAEEVEKIQKAMGTGIDVS 259
            A RA G    V +     +  +A+++GAD +V         +      Q A G G DV 
Sbjct: 181 YA-RAMGF-ETVAITRSPDKRELARKLGADEVVD--------SGAELDEQAAAG-GADVI 229

Query: 260 FDCAGLNKTMSTALGATCAGGKVCLVGM-GHHEMTVPLTPAAVREVDVVGVFRYKNTWPL 318
                       ALG    GG++ LVG+      +  + P  ++   + G          
Sbjct: 230 LVTVVSGAAAEAALGGLRRGGRIVLVGLPESPPFSPDIFPLIMKRQSIAGS--THGGRAD 287

Query: 319 CLELLR-SGKIDVKPLVTHRFGFSQKEVEEAFETSARG 355
             E L  + +  VKP +   F   Q    EA+E   +G
Sbjct: 288 LQEALDFAAEGKVKP-MIETFPLDQ--ANEAYERMEKG 322

Cinnamyl alcohol dehydrogenases (CAD), members of the medium chain dehydrogenase/reductase family, reduce cinnamaldehydes to cinnamyl alcohols in the last step of monolignal metabolism in plant cells walls. CAD binds 2 zinc ions and is NADPH- dependent. CAD family members are also found in non-plant species, e.g. in yeast where they have an aldehyde reductase activity. The medium chain dehydrogenases/reductase (MDR)/zinc-dependent alcohol dehydrogenase-like family, which contains the zinc-dependent alcohol dehydrogenase (ADH-Zn) and related proteins, is a diverse group of proteins related to the first identified member, class I mammalian ADH. MDRs display a broad range of activities and are distinguished from the smaller short chain dehydrogenases (~ 250 amino acids vs. the ~ 350 amino acids of the MDR). The MDR proteins have 2 domains: a C-terminal NAD(P) binding-Rossmann fold domain of a beta-alpha form and an N-terminal catalytic domain with distant homology to GroES. The MDR group contains a host of activities, including the founding alcohol dehydrogenase (ADH), quinone reductase, sorbitol dehydrogenase, formaldehyde dehydrogenase, butanediol DH, ketose reductase, cinnamyl reductase, and numerous others. The zinc-dependent alcohol dehydrogenases (ADHs) catalyze the NAD(P)(H)-dependent interconversion of alcohols to aldehydes, or ketones. Active site zinc has a catalytic role, while structural zinc aids in stability. ADH-like proteins typically form dimers (typically higher plants, mammals) or tetramers (yeast, bacteria), and generally have 2 tightly bound zinc atoms per subunit. The active site zinc is coordinated by a histidine, two cysteines, and a water molecule. The second zinc seems to play a structural role, affects subunit interactions, and is typically coordinated by 4 cysteines. Length = 330

>gnl|CDD|219758 pfam08240, ADH_N, Alcohol dehydrogenase GroES-like domain

 Score =  131 bits (331), Expect = 9e-38
 Identities = 50/110 (45%), Positives = 64/110 (58%), Gaps = 4/110 (3%)

Query: 43  DVLVRMKAVGICGSDVHYLKTLRCADFVVKEPMVIGHECAGVIEKVGSEVKTLVPGDRVA 102
           +VLVR+KA GICGSD+H  +        VK P+++GHE AG++E+VG  V  L  GDRV 
Sbjct: 3   EVLVRVKAAGICGSDLHIYRG---EPPPVKLPLILGHEGAGIVEEVGPGVTGLKVGDRVV 59

Query: 103 LEPGISCWRCDHCKGGRYNLCPEMKFFATPPVHGSLANQVVHPADLCFKL 152
           + P I C +C  C+ GR NLCP  KF     + G  A  VV PA     L
Sbjct: 60  VYPLIPCGKCAACREGRENLCPNGKFLGV-HLDGGFAEYVVVPARNLVPL 108

This is the catalytic domain of alcohol dehydrogenases. Many of them contain an inserted zinc binding domain. This domain has a GroES-like structure. Length = 108

>gnl|CDD|176257 cd08297, CAD3, Cinnamyl alcohol dehydrogenases (CAD)

 Score =  136 bits (344), Expect = 5e-37
 Identities = 106/353 (30%), Positives = 160/353 (45%), Gaps = 41/353 (11%)

Query: 20  AAWLL--GVNTLKIQPFELPSLGPYDVLVRMKAVGICGSDVHYLKTLRCADF--VVKEPM 75
           AA +   G    +++   +P  GP +VLV+++A G+C +D+H        D+    K P+
Sbjct: 3   AAVVEEFGEKPYEVKDVPVPEPGPGEVLVKLEASGVCHTDLHAAL----GDWPVKPKLPL 58

Query: 76  VIGHECAGVIEKVGSEVKTLVPGDRVALEPGI-----SCWRCDHCKGGRYNLCPEMKFFA 130
           + GHE AGV+  VG  V  L  GDRV    G+     +C +C++C+ G   LCP  K  +
Sbjct: 59  IGGHEGAGVVVAVGPGVSGLKVGDRV----GVKWLYDACGKCEYCRTGDETLCPNQK-NS 113

Query: 131 TPPVHGSLANQVVHPADLCFKLPDNVSLEEGA--MCEPLSVGLHACRRANIGPETNVLIM 188
              V G+ A   +  A     +PD +S E+ A  +C  ++V   A ++A + P   V+I 
Sbjct: 114 GYTVDGTFAEYAIADARYVTPIPDGLSFEQAAPLLCAGVTV-YKALKKAGLKPGDWVVIS 172

Query: 189 GAGPIGLVTMLG---APRAFGAPRIVIVDVDDYRLSVAKEIGADNIVKVSTNLQDIAEEV 245
           GAG  G +  LG   A +A G  R++ +DV D +L +AKE+GAD  V       D  E V
Sbjct: 173 GAG--GGLGHLGVQYA-KAMGL-RVIAIDVGDEKLELAKELGADAFVDFKK--SDDVEAV 226

Query: 246 EKIQKAMGTGIDVSFDCAGLNKTMSTALGATCAGGKVCLVGMGHHEMTVPLTPAAV--RE 303
           +++    G G       A        AL     GG +  VG+      +PL P  +  R 
Sbjct: 227 KEL--TGGGGAHAVVVTAVSAAAYEQALDYLRPGGTLVCVGLPPGGF-IPLDPFDLVLRG 283

Query: 304 VDVVGVFRYKNTW-PLCLELLRSGKIDVKPLVTHRFGFSQKEVEEAFETSARG 355
           + +VG            LE    GK  VKP +          + E FE    G
Sbjct: 284 ITIVGSLVGTRQDLQEALEFAARGK--VKPHIQ-VVPLED--LNEVFEKMEEG 331

These alcohol dehydrogenases are related to the cinnamyl alcohol dehydrogenases (CAD), members of the medium chain dehydrogenase/reductase family. NAD(P)(H)-dependent oxidoreductases are the major enzymes in the interconversion of alcohols and aldehydes, or ketones. Cinnamyl alcohol dehydrogenases (CAD) reduce cinnamaldehydes to cinnamyl alcohols in the last step of monolignal metabolism in plant cells walls. CAD binds 2 zinc ions and is NADPH- dependent. CAD family members are also found in non-plant species, e.g. in yeast where they have an aldehyde reductase activity. The medium chain dehydrogenases/reductase (MDR)/zinc-dependent alcohol dehydrogenase-like family, which contains the zinc-dependent alcohol dehydrogenase (ADH-Zn) and related proteins, is a diverse group of proteins related to the first identified member, class I mammalian ADH. MDRs display a broad range of activities and are distinguished from the smaller short chain dehydrogenases (~ 250 amino acids vs. the ~ 350 amino acids of the MDR). The MDR proteins have 2 domains: a C-terminal NAD(P) binding-Rossmann fold domain of a beta-alpha form and an N-terminal catalytic domain with distant homology to GroES. The MDR group contains a host of activities, including the founding alcohol dehydrogenase (ADH), quinone reductase, sorbitol dehydrogenase, formaldehyde dehydrogenase, butanediol DH, ketose reductase, cinnamyl reductase, and numerous others. The zinc-dependent alcohol dehydrogenases (ADHs) catalyze the NAD(P)(H)-dependent interconversion of alcohols to aldehydes or ketones. Active site zinc has a catalytic role, while structural zinc aids in stability. ADH-like proteins typically form dimers (typically higher plants, mammals) or tetramers (yeast, bacteria), and generally have 2 tightly bound zinc atoms per subunit. The active site zinc is coordinated by a histidine, two cysteines, and a water molecule. The second zinc seems to play a structural role, affects subunit interactions, and is typically coordinated by 4 cysteines. Length = 341

>gnl|CDD|223677 COG0604, Qor, NADPH:quinone reductase and related Zn-dependent oxidoreductases [Energy production and conversion / General function prediction only]

 Score =  134 bits (338), Expect = 2e-36
 Identities = 96/344 (27%), Positives = 142/344 (41%), Gaps = 50/344 (14%)

Query: 25  GVNTLKIQPFELPSLGPYDVLVRMKAVGICGSDVHYLKTLRCADFVVKE-PMVIGHECAG 83
           G   LK+     P  GP +VLVR+KA G+   DV      +     V+  P + G E AG
Sbjct: 11  GPEVLKVVEVPEPEPGPGEVLVRVKAAGVNPIDV---LVRQGLAPPVRPLPFIPGSEAAG 67

Query: 84  VIEKVGSEVKTLVPGDRVALEPGISCWRCDHCKGGRYNLCPEMKFFATPPVHGSLANQVV 143
           V+  VGS V     GDRVA                                 G  A  VV
Sbjct: 68  VVVAVGSGVTGFKVGDRVA-------------------------ALGGVGRDGGYAEYVV 102

Query: 144 HPADLCFKLPDNVSLEEGA--MCEPLSVGLHACRRANIGPETNVLIMGA-GPIGLVTMLG 200
            PAD    LPD +S EE A      L+  L    RA + P   VL+ GA G +G   +  
Sbjct: 103 VPADWLVPLPDGLSFEEAAALPLAGLTAWLALFDRAGLKPGETVLVHGAAGGVGSAAIQL 162

Query: 201 APRAFGAPRIVIVDVDDYRLSVAKEIGADNIVKVSTNLQDIAEEVEKIQKAMGTGIDVSF 260
           A +A GA  + +V   + +L + KE+GAD+++      +D  E+V ++    G G+DV  
Sbjct: 163 A-KALGATVVAVVSSSE-KLELLKELGADHVINYRE--EDFVEQVRELTG--GKGVDVVL 216

Query: 261 DCAGLNKTMSTALGATCAGGKVCLVGM--GHHEMTVPLTPAAVREVDVVGVFRYKNTWPL 318
           D  G   T + +L A   GG++  +G   G   + + L P   + + + GV         
Sbjct: 217 DTVG-GDTFAASLAALAPGGRLVSIGALSGGPPVPLNLLPLLGKRLTLRGVTLGSRDPEA 275

Query: 319 -------CLELLRSGKIDVKPLVTHRFGFSQKEVEEAFETSARG 355
                    +LL SGK+  KP++   +  ++     A     R 
Sbjct: 276 LAEALAELFDLLASGKL--KPVIDRVYPLAEAPAAAAHLLLERR 317

Length = 326

>gnl|CDD|176186 cd05283, CAD1, Cinnamyl alcohol dehydrogenases (CAD)

 Score =  132 bits (335), Expect = 9e-36
 Identities = 92/345 (26%), Positives = 138/345 (40%), Gaps = 56/345 (16%)

Query: 29  LKIQPFELPSLGPYDVLVRMKAVGICGSDVHYLKTLRCADFVVKEPMVIGHECAGVIEKV 88
           L+   FE   LGP DV +++   G+C SD+H   TLR      K P+V GHE  G++  V
Sbjct: 12  LEPFTFERRPLGPDDVDIKITYCGVCHSDLH---TLRNEWGPTKYPLVPGHEIVGIVVAV 68

Query: 89  GSEVKTLVPGDRVALEPGI-----SCWRCDHCKGGRYNLCPEMKFFATPPV------HGS 137
           GS+V     GDRV    G+     SC  C+ CK G    CP+                G 
Sbjct: 69  GSKVTKFKVGDRV----GVGCQVDSCGTCEQCKSGEEQYCPKGVVTYNGKYPDGTITQGG 124

Query: 138 LANQVVHPADLCFKLPDNVSLEEGA--MC------EPLSVGLHACRRANIGPETNVLIMG 189
            A+ +V      FK+P+ +     A  +C       PL       +R  +GP   V ++G
Sbjct: 125 YADHIVVDERFVFKIPEGLDSAAAAPLLCAGITVYSPL-------KRNGVGPGKRVGVVG 177

Query: 190 AGPIG-LVTMLGAPRAFGAPRIVIVDVDDYRLSVAKEIGADNIVKVSTNLQDIAEEVEKI 248
            G +G L       +A GA  +        +   A ++GAD  +          ++ E +
Sbjct: 178 IGGLGHLAVKFA--KALGA-EVTAFSRSPSKKEDALKLGADEFI--------ATKDPEAM 226

Query: 249 QKAMGTGIDVSFDCAGLNKTMSTALGATCAGGKVCLVGMGHHEMTVPLTPAAVREVDVVG 308
           +KA G+ +D+  D    +  +   L     GG + LVG     + VP  P       V G
Sbjct: 227 KKAAGS-LDLIIDTVSASHDLDPYLSLLKPGGTLVLVGAPEEPLPVPPFPLIFGRKSVAG 285

Query: 309 VF--RYKNTWPLCLELLR-SGKIDVKPLVTHRFGFSQKEVEEAFE 350
                 K T     E+L  + +  +KP V          + EA E
Sbjct: 286 SLIGGRKET----QEMLDFAAEHGIKPWVEV---IPMDGINEALE 323

Cinnamyl alcohol dehydrogenases (CAD), members of the medium chain dehydrogenase/reductase family, reduce cinnamaldehydes to cinnamyl alcohols in the last step of monolignal metabolism in plant cells walls. CAD binds 2 zinc ions and is NADPH- dependent. CAD family members are also found in non-plant species, e.g. in yeast where they have an aldehyde reductase activity. The medium chain dehydrogenases/reductase (MDR)/zinc-dependent alcohol dehydrogenase-like family, which contains the zinc-dependent alcohol dehydrogenase (ADH-Zn) and related proteins, is a diverse group of proteins related to the first identified member, class I mammalian ADH. MDRs display a broad range of activities and are distinguished from the smaller short chain dehydrogenases (~ 250 amino acids vs. the ~ 350 amino acids of the MDR). The MDR proteins have 2 domains: a C-terminal NAD(P) binding-Rossmann fold domain of a beta-alpha form and an N-terminal catalytic domain with distant homology to GroES. The MDR group contains a host of activities, including the founding alcohol dehydrogenase (ADH), quinone reductase, sorbitol dehydrogenase, formaldehyde dehydrogenase, butanediol DH, ketose reductase, cinnamyl reductase, and numerous others. The zinc-dependent alcohol dehydrogenases (ADHs) catalyze the NAD(P)(H)-dependent interconversion of alcohols to aldehydes or ketones. Active site zinc has a catalytic role, while structural zinc aids in stability. ADH-like proteins typically form dimers (typically higher plants, mammals) or tetramers (yeast, bacteria), and generally have 2 tightly bound zinc atoms per subunit. The active site zinc is coordinated by a histidine, two cysteines, and a water molecule. The second zinc seems to play a structural role, affects subunit interactions, and is typically coordinated by 4 cysteines. Length = 337

>gnl|CDD|176247 cd08287, FDH_like_ADH3, formaldehyde dehydrogenase (FDH)-like

 Score =  130 bits (329), Expect = 6e-35
 Identities = 102/359 (28%), Positives = 165/359 (45%), Gaps = 35/359 (9%)

Query: 20  AAWLLGVNTLKIQPFELPSL-GPYDVLVRMKAVGICGSDVHYLKTLRCADFVVKEPMVIG 78
           A  + G   ++++    P +  P D ++R+ A  +CGSD+   + +         P  IG
Sbjct: 3   ATVIHGPGDIRVEEVPDPVIEEPTDAVIRVVATCVCGSDLWPYRGVSPTR----APAPIG 58

Query: 79  HECAGVIEKVGSEVKTLVPGDRVALEPGISCWRCDHCKGGRYNLCPEMKFFATPPVHGSL 138
           HE  GV+E+VGSEV ++ PGD V     IS   C  C+ G    C    F+    V G  
Sbjct: 59  HEFVGVVEEVGSEVTSVKPGDFVIAPFAISDGTCPFCRAGFTTSCVHGGFW-GAFVDGGQ 117

Query: 139 ANQVVHP-AD-LCFKLPDNVSLEEG------AMCEPLSVGLHACRRANIGPETNVLIMGA 190
              V  P AD    K+P + S +E       A+ + +  G HA   A + P + V+++G 
Sbjct: 118 GEYVRVPLADGTLVKVPGSPSDDEDLLPSLLALSDVMGTGHHAAVSAGVRPGSTVVVVGD 177

Query: 191 GPIGLVTMLGAPRAFGAPRIVIVDVDDYRLSVAKEIGADNIVKVSTNLQDIAEEVEKIQK 250
           G +GL  +L A +  GA RI+ +   + R ++A+E GA +IV      +   E V ++ +
Sbjct: 178 GAVGLCAVLAA-KRLGAERIIAMSRHEDRQALAREFGATDIVA-----ERGEEAVARV-R 230

Query: 251 AM--GTGIDVSFDCAGLNKTMSTALGATCAGGKVCLVGMGHHEMTVPLTPAAVREVDVVG 308
            +  G G D   +C G  ++M  A+     GG+V  VG+ H  + + +     R V + G
Sbjct: 231 ELTGGVGADAVLECVGTQESMEQAIAIARPGGRVGYVGVPHGGVELDVRELFFRNVGLAG 290

Query: 309 ----VFRYKNTWPLCLELLRSGKIDVKPLVTHRFGFSQKEVEEAFET-SARGGTAIKVM 362
               V RY    P  L+ + +G+I+   +          EV E +     R   AIKV+
Sbjct: 291 GPAPVRRYL---PELLDDVLAGRINPGRVFDLTLPLD--EVAEGYRAMDER--RAIKVL 342

This group contains proteins identified as alcohol dehydrogenases and glutathione-dependant formaldehyde dehydrogenases (FDH) of the zinc-dependent/medium chain alcohol dehydrogenase family. The MDR family uses NAD(H) as a cofactor in the interconversion of alcohols and aldehydes, or ketones. FDH converts formaldehyde and NAD to formate and NADH. The initial step in this process the spontaneous formation of a S-(hydroxymethyl)glutathione adduct from formaldehyde and glutathione, followed by FDH-mediated oxidation (and detoxification) of the adduct to S-formylglutathione. The medium chain alcohol dehydrogenase family (MDR) has a NAD(P)(H)-binding domain in a Rossmann fold of a beta-alpha form. The N-terminal region typically has an all-beta catalytic domain. These proteins typically form dimers (typically higher plants, mammals) or tetramers (yeast, bacteria), and have 2 tightly bound zinc atoms per subunit. Length = 345

>gnl|CDD|176227 cd08266, Zn_ADH_like1, Alcohol dehydrogenases of the MDR family

 Score =  130 bits (328), Expect = 1e-34
 Identities = 103/337 (30%), Positives = 148/337 (43%), Gaps = 39/337 (11%)

Query: 29  LKIQPFELPSLGPYDVLVRMKAVGICGSDVHYLKTLRCADFVVKEPMVIGHECAGVIEKV 88
           L+      P  GP +VLVR+KA  +   D+   + +      +  P ++G + AGV+E V
Sbjct: 15  LEYGDLPEPEPGPDEVLVRVKAAALNHLDLWVRRGMPGIK--LPLPHILGSDGAGVVEAV 72

Query: 89  GSEVKTLVPGDRVALEPGISCWRCDHCKGGRYNLCPEMKFFATPPVHGSLANQVVHPADL 148
           G  V  + PG RV + PGISC RC++C  GR NLC +        V G  A  V  PA  
Sbjct: 73  GPGVTNVKPGQRVVIYPGISCGRCEYCLAGRENLCAQYGILGE-HVDGGYAEYVAVPARN 131

Query: 149 CFKLPDNVSLEEGAMCEPLSVGLHACR----RANIGPETNVLIMGAGP-IGLVTMLGAPR 203
              +PDN+S EE A   PL   L A      RA + P   VL+ GAG  +G   +  A +
Sbjct: 132 LLPIPDNLSFEEAA-AAPL-TFLTAWHMLVTRARLRPGETVLVHGAGSGVGSAAIQIA-K 188

Query: 204 AFGAPRIVIVDVDDYRLSVAKEIGADNIVKVSTNLQDIAEEVEKIQKAMGTGIDVSFDCA 263
            FGA  I     +D +L  AKE+GAD ++      +D   EV ++      G+DV  +  
Sbjct: 189 LFGATVIATAGSED-KLERAKELGADYVIDYRK--EDFVREVRELTG--KRGVDVVVEHV 243

Query: 264 GLNKTMSTALGATCAGGKVCLVGMGHHEMTVPLTPAAVREV-----DVVGVF-----RYK 313
           G   T   +L +   GG++   G      T    P  +R V      ++G          
Sbjct: 244 GA-ATWEKSLKSLARGGRLVTCG----ATTGYEAPIDLRHVFWRQLSILGSTMGTKAELD 298

Query: 314 NTWPLCLELLRSGKIDVKPLVTHRFGFSQKEVEEAFE 350
                 L L+  GK+  KP++   F     E  EA  
Sbjct: 299 EA----LRLVFRGKL--KPVIDSVFPLE--EAAEAHR 327

This group contains proteins related to the zinc-dependent alcohol dehydrogenases. However, while the group has structural zinc site characteristic of these enzymes, it lacks the consensus site for a catalytic zinc. NAD(P)(H)-dependent oxidoreductases are the major enzymes in the interconversion of alcohols and aldehydes, or ketones. Alcohol dehydrogenase in the liver converts ethanol and NAD+ to acetaldehyde and NADH, while in yeast and some other microorganisms ADH catalyzes the conversion acetaldehyde to ethanol in alcoholic fermentation. ADH is a member of the medium chain alcohol dehydrogenase family (MDR), which has a NAD(P)(H)-binding domain in a Rossmann fold of a beta-alpha form. The NAD(H)-binding region is comprised of 2 structurally similar halves, each of which contacts a mononucleotide. A GxGxxG motif after the first mononucleotide contact half allows the close contact of the coenzyme with the ADH backbone. The N-terminal catalytic domain has a distant homology to GroES. These proteins typically form dimers (typically higher plants, mammals) or tetramers (yeast, bacteria), and have 2 tightly bound zinc atoms per subunit, a catalytic zinc at the active site, and a structural zinc in a lobe of the catalytic domain. NAD(H)-binding occurs in the cleft between the catalytic and coenzyme-binding domains at the active site, and coenzyme binding induces a conformational closing of this cleft. Coenzyme binding typically precedes and contributes to substrate binding. In human ADH catalysis, the zinc ion helps coordinate the alcohol, followed by deprotonation of a histidine, the ribose of NAD, a serine, then the alcohol, which allows the transfer of a hydride to NAD+, creating NADH and a zinc-bound aldehyde or ketone. In yeast and some bacteria, the active site zinc binds an aldehyde, polarizing it, and leading to the reverse reaction. Length = 342

>gnl|CDD|176238 cd08277, liver_alcohol_DH_like, Liver alcohol dehydrogenase

 Score =  126 bits (318), Expect = 3e-33
 Identities = 97/371 (26%), Positives = 165/371 (44%), Gaps = 42/371 (11%)

Query: 19  MAAWLLGVNTLKIQPFELPSLGPYDVLVRMKAVGICGSDVHYLKTLRCADFVVKEPMVIG 78
             AW  G   L I+  E+      +V ++M A  +C +D+  ++  +   F    P+++G
Sbjct: 6   AVAWEAG-KPLVIEEIEVAPPKANEVRIKMLATSVCHTDILAIEGFKATLF----PVILG 60

Query: 79  HECAGVIEKVGSEVKTLVPGDRVALEPGIS-CWRCDHCKGGRYNLCPEMKFFATP----- 132
           HE AG++E VG  V  L PGD+V +   I  C  C +C+ G+ NLC + +   +      
Sbjct: 61  HEGAGIVESVGEGVTNLKPGDKV-IPLFIGQCGECSNCRSGKTNLCQKYRANESGLMPDG 119

Query: 133 ---------PVH-----GSLANQVVHPADLCFKLPDNVSLEEGA-MCEPLSVGLHAC-RR 176
                     ++      + +   V   +   K+     LE    +    S G  A    
Sbjct: 120 TSRFTCKGKKIYHFLGTSTFSQYTVVDENYVAKIDPAAPLEHVCLLGCGFSTGYGAAWNT 179

Query: 177 ANIGPETNVLIMGAGPIGLVTMLGAPRAFGAPRIVIVDVDDYRLSVAKEIGADNIVKVST 236
           A + P + V + G G +GL  ++GA +  GA RI+ VD+++ +   AKE GA + +    
Sbjct: 180 AKVEPGSTVAVFGLGAVGLSAIMGA-KIAGASRIIGVDINEDKFEKAKEFGATDFI---- 234

Query: 237 NLQDIAEEV-EKIQKAMGTGIDVSFDCAGLNKTMSTALGATCAG-GKVCLVGMGH--HEM 292
           N +D  + V E I++  G G+D SF+C G    M+ AL +T  G G   +VG+       
Sbjct: 235 NPKDSDKPVSEVIREMTGGGVDYSFECTGNADLMNEALESTKLGWGVSVVVGVPPGAELS 294

Query: 293 TVPLTPAAVREVD--VVGVFRYKNTWPLCLELLRSGKIDVKPLVTHRFGFSQKEVEEAFE 350
             P      R       G F+ ++  P  +    + K D+  L+TH   F  +E+ + F+
Sbjct: 295 IRPFQLILGRTWKGSFFGGFKSRSDVPKLVSKYMNKKFDLDELITHVLPF--EEINKGFD 352

Query: 351 TSARGGTAIKV 361
              + G  I+ 
Sbjct: 353 L-MKSGECIRT 362

NAD(P)(H)-dependent oxidoreductases are the major enzymes in the interconversion of alcohols and aldehydes, or ketones. Alcohol dehydrogenase in the liver converts ethanol and NAD+ to acetaldehyde and NADH, while in yeast and some other microorganisms ADH catalyzes the conversion acetaldehyde to ethanol in alcoholic fermentation. There are 7 vertebrate ADH 7 classes, 6 of which have been identified in humans. Class III, glutathione-dependent formaldehyde dehydrogenase, has been identified as the primordial form and exists in diverse species, including plants, micro-organisms, vertebrates, and invertebrates. Class I, typified by liver dehydrogenase, is an evolving form. Gene duplication and functional specialization of ADH into ADH classes and subclasses created numerous forms in vertebrates. For example, the A, B and C (formerly alpha, beta, gamma) human class I subunits have high overall structural similarity, but differ in the substrate binding pocket and therefore in substrate specificity. In human ADH catalysis, the zinc ion helps coordinate the alcohol, followed by deprotonation of a histidine (His-51), the ribose of NAD, a serine (Ser-48) , then the alcohol, which allows the transfer of a hydride to NAD+, creating NADH and a zinc-bound aldehyde or ketone. In yeast and some bacteria, the active site zinc binds an aldehyde, polarizing it, and leading to the reverse reaction. ADH is a member of the medium chain alcohol dehydrogenase family (MDR), which has a NAD(P)(H)-binding domain in a Rossmann fold of an beta-alpha form. The NAD(H)-binding region is comprised of 2 structurally similar halves, each of which contacts a mononucleotide. A GxGxxG motif after the first mononucleotide contact half allows the close contact of the coenzyme with the ADH backbone. The N-terminal catalytic domain has a distant homology to GroES. These proteins typically form dimers (typically higher plants, mammals) or tetramers (yeast, bacteria), and have 2 tightly bound zinc atoms per subunit, a catalytic zinc at the active site and a structural zinc in a lobe of the catalytic domain. NAD(H) binding occurs in the cleft between the catalytic and coenzyme-binding domains at the active site, and coenzyme binding induces a conformational closing of this cleft. Coenzyme binding typically precedes and contributes to substrate binding. Length = 365

>gnl|CDD|176217 cd08255, 2-desacetyl-2-hydroxyethyl_bacteriochlorophyllide_like, 2-desacetyl-2-hydroxyethyl bacteriochlorophyllide and other MDR family members

 Score =  120 bits (303), Expect = 9e-32
 Identities = 79/320 (24%), Positives = 122/320 (38%), Gaps = 65/320 (20%)

Query: 60  YLKTLRCADFVVKEPMVIGHECAGVIEKVGSEVKTLVPGDRVALEPGISCWRCDHCKGGR 119
            L+ L      +  P+  G+   G + +VGS V    PGDRV                  
Sbjct: 7   ALEGLSTGTEKLPLPLPPGYSSVGRVVEVGSGVTGFKPGDRVF----------------- 49

Query: 120 YNLCPEMKFFATPPVHGSLANQVVHPADLCFKLPDNVSLEEGAMCEPLSVGLHACRRANI 179
                           G  A +VV PA+L   LPD +  E  A+    +  L+  R A  
Sbjct: 50  --------------CFGPHAERVVVPANLLVPLPDGLPPERAALTALAATALNGVRDAEP 95

Query: 180 GPETNVLIMGAGPIGLVTMLGAPRAFGAPRIVIVDVDDYRLSVAKEIGADNIVKVSTNLQ 239
                V ++G G +GL+    A +A GA  +V VD D  R  +A+ +G  + V       
Sbjct: 96  RLGERVAVVGLGLVGLLAAQLA-KAAGAREVVGVDPDAARRELAEALGPADPVA-----A 149

Query: 240 DIAEEVEKIQKAMGTGIDVSFDCAGLNKTMSTALGATCAGGKVCLVGMGHHEMTVPLTPA 299
           D A+E+       G G DV  + +G    + TAL      G+V LVG    +  +     
Sbjct: 150 DTADEI------GGRGADVVIEASGSPSALETALRLLRDRGRVVLVGWYGLKPLLLGEEF 203

Query: 300 AVREVDVV-----GVFRYKNTWP----------LCLELLRSGKIDVKPLVTHRFGFSQKE 344
             + + +      G+ RY    P            L+LL  G+++   L+THR  F   +
Sbjct: 204 HFKRLPIRSSQVYGIGRY--DRPRRWTEARNLEEALDLLAEGRLE--ALITHRVPFE--D 257

Query: 345 VEEAFET-SARGGTAIKVMF 363
             EA+          +KV+ 
Sbjct: 258 APEAYRLLFEDPPECLKVVL 277

This subgroup of the medium chain dehydrogenases/reductase (MDR)/zinc-dependent alcohol dehydrogenase-like family has members identified as 2-desacetyl-2-hydroxyethyl bacteriochlorophyllide A dehydrogenase and alcohol dehydrogenases. The medium chain dehydrogenases/reductase (MDR)/zinc-dependent alcohol dehydrogenase-like family, which contains the zinc-dependent alcohol dehydrogenase (ADH-Zn) and related proteins, is a diverse group of proteins related to the first identified member, class I mammalian ADH. MDRs display a broad range of activities and are distinguished from the smaller short chain dehydrogenases (~ 250 amino acids vs. the ~ 350 amino acids of the MDR). The MDR proteins have 2 domains: a C-terminal NAD(P) binding-Rossmann fold domain of a beta-alpha form and an N-terminal catalytic domain with distant homology to GroES. The MDR group contains a host of activities, including the founding alcohol dehydrogenase (ADH), quinone reductase, sorbitol dehydrogenase, formaldehyde dehydrogenase, butanediol DH, ketose reductase, cinnamyl reductase, and numerous others. The zinc-dependent alcohol dehydrogenases (ADHs) catalyze the NAD(P)(H)-dependent interconversion of alcohols to aldehydes or ketones. Active site zinc has a catalytic role, while structural zinc aids in stability. Length = 277

>gnl|CDD|176242 cd08282, PFDH_like, Pseudomonas putida aldehyde-dismutating formaldehyde dehydrogenase (PFDH)

 Score =  121 bits (305), Expect = 4e-31
 Identities = 81/263 (30%), Positives = 118/263 (44%), Gaps = 27/263 (10%)

Query: 18  NMAAWLLGVNTLKIQPFELPSL-GPYDVLVRMKAVGICGSDVHYLKTLRCADFVVKEPMV 76
             A    G   + ++    P +  P D +VR+    ICGSD+H  +         +  +V
Sbjct: 1   MKAVVYGGPGNVAVEDVPDPKIEHPTDAIVRITTTAICGSDLHMYR----GRTGAEPGLV 56

Query: 77  IGHECAGVIEKVGSEVKTLVPGDRVALEPGISCWRCDHCKGGRYNLCPEM---------K 127
           +GHE  G +E+VGS V++L  GDRV +   ++C RC +CK G   +C  +          
Sbjct: 57  LGHEAMGEVEEVGSAVESLKVGDRVVVPFNVACGRCRNCKRGLTGVCLTVNPGRAGGAYG 116

Query: 128 FFATPPVHGSLANQVVHP-ADL-CFKLPDNVSLEEGAMCEPLS----VGLHACRRANIGP 181
           +    P  G  A  +  P AD    KLPD    +E      LS     G H    A + P
Sbjct: 117 YVDMGPYGGGQAEYLRVPYADFNLLKLPDRDGAKEKDDYLMLSDIFPTGWHGLELAGVQP 176

Query: 182 ETNVLIMGAGPIGLVTMLGAPRAFGAPRIVIVDVDDYRLSVAKEIGADNIVKVSTNLQDI 241
              V + GAGP+GL+    A    GA R+ +VD    RL +A+ IGA  I     +  D 
Sbjct: 177 GDTVAVFGAGPVGLMAAYSA-ILRGASRVYVVDHVPERLDLAESIGAIPI-----DFSD- 229

Query: 242 AEEVEKIQKAMGTGIDVSFDCAG 264
            + VE+I      G+D + DC G
Sbjct: 230 GDPVEQILGLEPGGVDRAVDCVG 252

Formaldehyde dehydrogenase (FDH) is a member of the zinc-dependent/medium chain alcohol dehydrogenase family. Unlike typical FDH, Pseudomonas putida aldehyde-dismutating FDH (PFDH) is glutathione-independent. PFDH converts 2 molecules of aldehydes to corresponding carboxylic acid and alcohol. MDH family uses NAD(H) as a cofactor in the interconversion of alcohols and aldehydes, or ketones. Like the zinc-dependent alcohol dehydrogenases (ADH) of the medium chain alcohol dehydrogenase/reductase family (MDR), these tetrameric FDHs have a catalytic zinc that resides between the catalytic and NAD(H)binding domains and a structural zinc in a lobe of the catalytic domain. Unlike ADH, where NAD(P)(H) acts as a cofactor, NADH in FDH is a tightly bound redox cofactor (similar to nicotinamide proteins). The medium chain alcohol dehydrogenase family (MDR) has a NAD(P)(H)-binding domain in a Rossmann fold of an beta-alpha form. The N-terminal region typically has an all-beta catalytic domain. These proteins typically form dimers (typically higher plants, mammals) or tetramers (yeast, bacteria), and have 2 tightly bound zinc atoms per subunit. Length = 375

>gnl|CDD|132492 TIGR03451, mycoS_dep_FDH, S-(hydroxymethyl)mycothiol dehydrogenase

 Score =  117 bits (295), Expect = 5e-30
 Identities = 105/359 (29%), Positives = 158/359 (44%), Gaps = 69/359 (19%)

Query: 36  LPSLGPYDVLVRMKAVGICGSDVHYLKTLRCADFVVKEPMVIGHECAGVIEKVGSEVKTL 95
           +P  GP +V+V ++A G+C +D+HY +     +F    P ++GHE AGV+E VG  V  +
Sbjct: 21  VPDPGPGEVIVDIQACGVCHTDLHYREGGINDEF----PFLLGHEAAGVVEAVGEGVTDV 76

Query: 96  VPGDRVALEPGISCWRCDHCKGGRYNLCPEMKFFATPPVH-------------GSLANQV 142
            PGD V L     C +C  CK GR   C +    AT  +              G+ A + 
Sbjct: 77  APGDYVVLNWRAVCGQCRACKRGRPWYCFD-THNATQKMTLTDGTELSPALGIGAFAEKT 135

Query: 143 VHPADLCFKL-PDNVSLEEGAMCEPLSVGLHAC----------RRANIGPETNVLIMGAG 191
           +  A  C K+ P           +P + GL  C              +    +V ++G G
Sbjct: 136 LVHAGQCTKVDPA---------ADPAAAGLLGCGVMAGLGAAVNTGGVKRGDSVAVIGCG 186

Query: 192 PIGLVTMLGAPRAFGAPRIVIVDVDDYRLSVAKEIGADNIVKVSTNLQDIAEEVEKIQKA 251
            +G   + GA  A GA +I+ VD+DD +L  A+E GA + V  S       + VE I+  
Sbjct: 187 GVGDAAIAGAALA-GASKIIAVDIDDRKLEWAREFGATHTVNSSGT-----DPVEAIRAL 240

Query: 252 M-GTGIDVSFDCAGLNKTMSTALGATCAGGKVCLVGMGHHEMTVPLTPAAVREVDVVGVF 310
             G G DV  D  G  +T   A  A    G V LVG+   +MT+        E+ ++ VF
Sbjct: 241 TGGFGADVVIDAVGRPETYKQAFYARDLAGTVVLVGVPTPDMTL--------ELPLLDVF 292

Query: 311 RY----KNTW----------PLCLELLRSGKIDVKPLVTHRFGFSQKEVEEAFETSARG 355
                 K++W          P+ ++L   G++ +   VT R G     VEEAF+    G
Sbjct: 293 GRGGALKSSWYGDCLPERDFPMLVDLYLQGRLPLDAFVTERIGLDD--VEEAFDKMHAG 349

Members of this protein family are mycothiol-dependent formaldehyde dehydrogenase (EC 1.2.1.66). This protein is found, so far, only in the Actinobacteria (Mycobacterium sp., Streptomyces sp., Corynebacterium sp., and related species), where mycothione replaces glutathione [Cellular processes, Detoxification]. Length = 358

>gnl|CDD|184316 PRK13771, PRK13771, putative alcohol dehydrogenase; Provisional

 Score =  117 bits (294), Expect = 5e-30
 Identities = 87/329 (26%), Positives = 148/329 (44%), Gaps = 30/329 (9%)

Query: 29  LKIQPFELPSLGPYDVLVRMKAVGICGSDVHYLKTLRCADFVVKEPMVIGHECAGVIEKV 88
            +I+    P  G  +V++++   G+C  D   L  L+     +K P+++GHE  G +E+V
Sbjct: 13  YRIEEVPDPKPGKDEVVIKVNYAGLCYRD---LLQLQGFYPRMKYPVILGHEVVGTVEEV 69

Query: 89  GSEVKTLVPGDRVALEPGISCWRCDHCKGGRYNLCPEMKFFATPPVHGSLANQVVHPADL 148
           G  VK   PGDRVA         C++C+ G    C     +    + G  A         
Sbjct: 70  GENVKGFKPGDRVASLLYAPDGTCEYCRSGEEAYCKNRLGYGE-ELDGFFAEYAKVKVTS 128

Query: 149 CFKLPDNVSLEEGAMCEP--LSVGLHACRRANIGPETNVLIMGAGPIGLVTM--LGAPRA 204
             K+P NVS +EGA+  P    +     RRA +     VL+ GAG  G V +  +   +A
Sbjct: 129 LVKVPPNVS-DEGAVIVPCVTGMVYRGLRRAGVKKGETVLVTGAG--GGVGIHAIQVAKA 185

Query: 205 FGAPRIVIVDVDDYRLSVAKEIGADNIVKVSTNLQDIAEEVEKIQKAMGTGIDVSFDCAG 264
            GA +++ V   + +  +  +  AD ++  S      +EEV+KI      G D+  +  G
Sbjct: 186 LGA-KVIAVTSSESKAKIVSKY-ADYVIVGSK----FSEEVKKIG-----GADIVIETVG 234

Query: 265 LNKTMSTALGATCAGGKVCLVGMGHHEMTVPLTPAAV--REVDVVGVFR-YKNTWPLCLE 321
              T+  +L +   GGK+  +G      T  L    +  ++++++G     K      L+
Sbjct: 235 -TPTLEESLRSLNMGGKIIQIGNVDPSPTYSLRLGYIILKDIEIIGHISATKRDVEEALK 293

Query: 322 LLRSGKIDVKPLVTHRFGFSQKEVEEAFE 350
           L+  GKI  KP++      S  E+++A E
Sbjct: 294 LVAEGKI--KPVIGAEVSLS--EIDKALE 318

Length = 334

>gnl|CDD|176261 cd08301, alcohol_DH_plants, Plant alcohol dehydrogenase

 Score =  111 bits (279), Expect = 1e-27
 Identities = 89/345 (25%), Positives = 148/345 (42%), Gaps = 50/345 (14%)

Query: 41  PYDVLVRMKAVGICGSDVHYLK---TLRCADFVVKEPMVIGHECAGVIEKVGSEVKTLVP 97
             +V +++    +C +DV++ +         F    P ++GHE AG++E VG  V  L P
Sbjct: 27  AMEVRIKILHTSLCHTDVYFWEAKGQTPL--F----PRILGHEAAGIVESVGEGVTDLKP 80

Query: 98  GDRVALEPGISCWRCDHCKGGRYNLCPEMKF--------------FAT--PPVHGSLANQ 141
           GD V       C  C HCK  + N+C  ++               F+    P++  +   
Sbjct: 81  GDHVLPVFTGECKECRHCKSEKSNMCDLLRINTDRGVMINDGKSRFSINGKPIYHFVGTS 140

Query: 142 ------VVHPADLCFKLPDNVSLEEGAM--CEPLSVGLHACRR-ANIGPETNVLIMGAGP 192
                 VVH   +  K+     L++  +  C  +S GL A    A +   + V I G G 
Sbjct: 141 TFSEYTVVHVGCVA-KINPEAPLDKVCLLSCG-VSTGLGAAWNVAKVKKGSTVAIFGLGA 198

Query: 193 IGLVTMLGAPRAFGAPRIVIVDVDDYRLSVAKEIGADNIVKVSTNLQDIAEEVEKIQKAM 252
           +GL    GA R  GA RI+ VD++  +   AK+ G    V    N +D  + V+++   M
Sbjct: 199 VGLAVAEGA-RIRGASRIIGVDLNPSKFEQAKKFGVTEFV----NPKDHDKPVQEVIAEM 253

Query: 253 -GTGIDVSFDCAGLNKTMSTALGATCAG-GKVCLVGMGHHEMTVPLTPAAV-REVDVVGV 309
            G G+D SF+C G    M +A      G G   L+G+ H +      P  +     + G 
Sbjct: 254 TGGGVDYSFECTGNIDAMISAFECVHDGWGVTVLLGVPHKDAVFSTHPMNLLNGRTLKGT 313

Query: 310 F----RYKNTWPLCLELLRSGKIDVKPLVTHRFGFSQKEVEEAFE 350
                + K   P  +E     +++++  +TH   FS  E+ +AF+
Sbjct: 314 LFGGYKPKTDLPNLVEKYMKKELELEKFITHELPFS--EINKAFD 356

NAD(P)(H)-dependent oxidoreductases are the major enzymes in the interconversion of alcohols and aldehydes or ketones. Alcohol dehydrogenase in the liver converts ethanol and NAD+ to acetaldehyde and NADH, while in yeast and some other microorganisms ADH catalyzes the conversion acetaldehyde to ethanol in alcoholic fermentation. There are 7 vertebrate ADH 7 classes, 6 of which have been identified in humans. Class III, glutathione-dependent formaldehyde dehydrogenase, has been identified as the primordial form and exists in diverse species, including plants, micro-organisms, vertebrates, and invertebrates. Class I, typified by liver dehydrogenase, is an evolving form. Gene duplication and functional specialization of ADH into ADH classes and subclasses created numerous forms in vertebrates. For example, the A, B and C (formerly alpha, beta, gamma) human class I subunits have high overall structural similarity, but differ in the substrate binding pocket and therefore in substrate specificity. In human ADH catalysis, the zinc ion helps coordinate the alcohol, followed by deprotonation of a histidine (His-51), the ribose of NAD, a serine (Ser-48) , then the alcohol, which allows the transfer of a hydride to NAD+, creating NADH and a zinc-bound aldehyde or ketone. In yeast and some bacteria, the active site zinc binds an aldehyde, polarizing it, and leading to the reverse reaction. ADH is a member of the medium chain alcohol dehydrogenase family (MDR), which has a NAD(P)(H)-binding domain in a Rossmann fold of an beta-alpha form. The NAD(H)-binding region is comprised of 2 structurally similar halves, each of which contacts a mononucleotide. A GxGxxG motif after the first mononucleotide contact half allows the close contact of the coenzyme with the ADH backbone. The N-terminal catalytic domain has a distant homology to GroES. These proteins typically form dimers (typically higher plants, mammals) or tetramers (yeast, bacteria), and have 2 tightly bound zinc atoms per subunit, a catalytic zinc at the active site and a structural zinc in a lobe of the catalytic domain. NAD(H) binding occurs in the cleft between the catalytic and coenzyme-binding domains at the active site, and coenzyme binding induces a conformational closing of this cleft. Coenzyme binding typically precedes and contributes to substrate binding. Length = 369

>gnl|CDD|176191 cd05289, MDR_like_2, alcohol dehydrogenase and quinone reductase-like medium chain degydrogenases/reductases

 Score =  108 bits (271), Expect = 7e-27
 Identities = 94/359 (26%), Positives = 134/359 (37%), Gaps = 68/359 (18%)

Query: 19  MAAWLL----GVNTLKIQPFELPSLGPYDVLVRMKAVGICGSDVHYLKTLRCADFVVKEP 74
           M A  +    G   L++     P  GP +VLV++ A G+   D+   + L  A F +  P
Sbjct: 1   MKAVRIHEYGGPEVLELADVPTPEPGPGEVLVKVHAAGVNPVDLKIREGLLKAAFPLTLP 60

Query: 75  MVIGHECAGVIEKVGSEVKTLVPGDRVALEPGISCWRCDHCKGGRYNLCPEMKFFATPPV 134
           ++ GH+ AGV+  VG  V     GD V                           F   P 
Sbjct: 61  LIPGHDVAGVVVAVGPGVTGFKVGDEV---------------------------FGMTPF 93

Query: 135 H--GSLANQVVHPADLCFKLPDNVSLEEGAMCEPLSVGLHA----CRRANIGPETNVLIM 188
              G+ A  VV PAD     P N+S EE A   PL  GL A         +     VLI 
Sbjct: 94  TRGGAYAEYVVVPADELALKPANLSFEEAAAL-PL-AGLTAWQALFELGGLKAGQTVLIH 151

Query: 189 GA-GPIG--LVTMLGAPRAFGAPRIVIVDVDDYRLSVAKEIGADNIVKVSTNLQDIAEEV 245
           GA G +G   V +    +A GA   VI           + +GAD ++  +    + A   
Sbjct: 152 GAAGGVGSFAVQLA---KARGA--RVIATASAANADFLRSLGADEVIDYTKGDFERAAAP 206

Query: 246 EKIQKAMGTGIDVSFDCAGLNKTMSTALGATCAGGK-VCLVGMGHHEMTVPLTPAAVREV 304
                    G+D   D  G  +T++ +L     GG+ V + G            A  R V
Sbjct: 207 G--------GVDAVLDTVG-GETLARSLALVKPGGRLVSIAG-----PPPAEQAAKRRGV 252

Query: 305 DVVGVFRYKNTWPL--CLELLRSGKIDVKPLVTHRFGFSQKEVEEAFETSARGGTAIKV 361
               VF   +   L    EL+ +GK+  +P+V   F     +  EA E    G    KV
Sbjct: 253 RAGFVFVEPDGEQLAELAELVEAGKL--RPVVDRVFPLE--DAAEAHERLESGHARGKV 307

Members identified as zinc-dependent alcohol dehydrogenases and quinone oxidoreductase. QOR catalyzes the conversion of a quinone + NAD(P)H to a hydroquinone + NAD(P)+. Quinones are cyclic diones derived from aromatic compounds. Membrane bound QOR actin the respiratory chains of bacteria and mitochondria, while soluble QOR acts to protect from toxic quinones (e.g. DT-diaphorase) or as a soluble eye-lens protein in some vertebrates (e.g. zeta-crystalin). QOR reduces quinones through a semi-quinone intermediate via a NAD(P)H-dependent single electron transfer. QOR is a member of the medium chain dehydrogenase/reductase family, but lacks the zinc-binding sites of the prototypical alcohol dehydrogenases of this group. NAD(P)(H)-dependent oxidoreductases are the major enzymes in the interconversion of alcohols and aldehydes, or ketones. Alcohol dehydrogenase in the liver converts ethanol and NAD+ to acetaldehyde and NADH, while in yeast and some other microorganisms ADH catalyzes the conversion acetaldehyde to ethanol in alcoholic fermentation. ADH is a member of the medium chain alcohol dehydrogenase family (MDR), which has a NAD(P)(H)-binding domain in a Rossmann fold of a beta-alpha form. The NAD(H)-binding region is comprised of 2 structurally similar halves, each of which contacts a mononucleotide. A GxGxxG motif after the first mononucleotide contact half allows the close contact of the coenzyme with the ADH backbone. The N-terminal catalytic domain has a distant homology to GroES. These proteins typically form dimers (typically higher plants, mammals) or tetramers (yeast, bacteria), and have 2 tightly bound zinc atoms per subunit, a catalytic zinc at the active site and a structural zinc in a lobe of the catalytic domain. NAD(H) binding occurs in the cleft between the catalytic and coenzyme-binding domains at the active site, and coenzyme binding induces a conformational closing of this cleft. Coenzyme binding typically precedes and contributes to substrate binding. In human ADH catalysis, the zinc ion helps coordinate the alcohol, followed by deprotonation of a histidine, the ribose of NAD, a serine, then the alcohol, which allows the transfer of a hydride to NAD+, creating NADH and a zinc-bound aldehyde or ketone. In yeast and some bacteria, the active site zinc binds an aldehyde, polarizing it, and leading to the reverse reaction. Length = 309

>gnl|CDD|176259 cd08299, alcohol_DH_class_I_II_IV, class I, II, IV alcohol dehydrogenases

 Score =  108 bits (271), Expect = 2e-26
 Identities = 90/339 (26%), Positives = 149/339 (43%), Gaps = 42/339 (12%)

Query: 42  YDVLVRMKAVGICGSDVHYLKTLRCADFVVKEPMVIGHECAGVIEKVGSEVKTLVPGDRV 101
           ++V +++ A GIC SD H +        V   P+++GHE AG++E VG  V T+ PGD+V
Sbjct: 33  HEVRIKIVATGICRSDDHVVSGK----LVTPFPVILGHEAAGIVESVGEGVTTVKPGDKV 88

Query: 102 ALEPGISCWRCDHCKGGRYNLCPEMKFFAT---------------PPVH-----GSLANQ 141
                  C +C  C     NLC +                      P+H      + +  
Sbjct: 89  IPLFVPQCGKCRACLNPESNLCLKNDLGKPQGLMQDGTSRFTCKGKPIHHFLGTSTFSEY 148

Query: 142 VVHPADLCFKLPDNVSLEEGAM--CEPLSVGL-HACRRANIGPETNVLIMGAGPIGLVTM 198
            V       K+     LE+  +  C   S G   A   A + P +   + G G +GL  +
Sbjct: 149 TVVDEIAVAKIDAAAPLEKVCLIGCG-FSTGYGAAVNTAKVTPGSTCAVFGLGGVGLSAI 207

Query: 199 LGAPRAFGAPRIVIVDVDDYRLSVAKEIGADNIVKVSTNLQDIAEEV-EKIQKAMGTGID 257
           +G  +A GA RI+ VD++  + + AKE+GA   +    N QD  + + E + +    G+D
Sbjct: 208 MGC-KAAGASRIIAVDINKDKFAKAKELGATECI----NPQDYKKPIQEVLTEMTDGGVD 262

Query: 258 VSFDCAGLNKTMSTALGATCAGGKVC-LVGMGHHEMTVPLTPAAV---REVD--VVGVFR 311
            SF+  G   TM  AL +   G  V  +VG+      + + P  +   R     V G ++
Sbjct: 263 FSFEVIGRLDTMKAALASCHEGYGVSVIVGVPPSSQNLSINPMLLLTGRTWKGAVFGGWK 322

Query: 312 YKNTWPLCLELLRSGKIDVKPLVTHRFGFSQKEVEEAFE 350
            K++ P  +    + K ++ PL+TH   F +  + E F+
Sbjct: 323 SKDSVPKLVADYMAKKFNLDPLITHTLPFEK--INEGFD 359

NAD(P)(H)-dependent oxidoreductases are the major enzymes in the interconversion of alcohols and aldehydes or ketones. This group includes alcohol dehydrogenases corresponding to mammalian classes I, II, IV. Alcohol dehydrogenase in the liver converts ethanol and NAD+ to acetaldehyde and NADH, while in yeast and some other microorganisms ADH catalyzes the conversion acetaldehyde to ethanol in alcoholic fermentation. ADH is a member of the medium chain alcohol dehydrogenase family (MDR), which have a NAD(P)(H)-binding domain in a Rossmann fold of a beta-alpha form. The NAD(H)-binding region is comprised of 2 structurally similar halves, each of which contacts a mononucleotide. A GxGxxG motif after the first mononucleotide contact half allows the close contact of the coenzyme with the ADH backbone. The N-terminal catalytic domain has a distant homology to GroES. These proteins typically form dimers (typically higher plants, mammals) or tetramers (yeast, bacteria), and have 2 tightly bound zinc atoms per subunit, a catalytic zinc at the active site and a structural zinc in a lobe of the catalytic domain. NAD(H) binding occurs in the cleft between the catalytic and coenzyme-binding domains at the active site, and coenzyme binding induces a conformational closing of this cleft. Coenzyme binding typically precedes and contributes to substrate binding. In human ADH catalysis, the zinc ion helps coordinate the alcohol, followed by deprotonation of a histidine (His-51), the ribose of NAD, a serine (Ser-48) , then the alcohol, which allows the transfer of a hydride to NAD+, creating NADH and a zinc-bound aldehyde or ketone. In yeast and some bacteria, the active site zinc binds an aldehyde, polarizing it, and leading to the reverse reaction. Length = 373

>gnl|CDD|188504 TIGR03989, Rxyl_3153, oxidoreductase, Rxyl_3153 family

 Score =  107 bits (269), Expect = 3e-26
 Identities = 95/354 (26%), Positives = 157/354 (44%), Gaps = 48/354 (13%)

Query: 31  IQPFELPSLGPYDVLVRMKAVGICGSDVHYLKTLRCADFVVKE-PMVIGHECAGVIEKVG 89
           ++  EL      +VLV++ A G+C SD H    L   D  +   P++ GHE AGV+ KVG
Sbjct: 16  VEEIELDDPKAGEVLVKLVASGLCHSDEH----LVTGDLPMPRYPILGGHEGAGVVTKVG 71

Query: 90  SEVKTLVPGDRVALEPGISCWRCDHCKGGRYNLCPE--------MKFFATPPVH------ 135
             V  + PGD V L    +C RC  C  G  NLC               T   H      
Sbjct: 72  PGVTGVKPGDHVVLSFIPACGRCRWCSTGLQNLCDLGAALLTGSQISDGTYRFHADGQDV 131

Query: 136 ------GSLANQVVHPADLCFKLPDNVSLEEGAM---CEPLSVGLHACRRANIGPETNVL 186
                 G+ +   V P     K+ D++ L++  +     P   G  A   A++ P   V+
Sbjct: 132 GQMCLLGTFSEYTVVPEASVVKIDDDIPLDKACLVGCGVPTGWG-SAVNIADVRPGDTVV 190

Query: 187 IMGAGPIGLVTMLGAPRAFGAPRIVIVDVDDYRLSVAKEIGADNIVKVSTNLQDIAEEVE 246
           +MG G +G+  + GA  A GA +++ VD  +++   A + GA +          + E V+
Sbjct: 191 VMGIGGVGINAVQGAAVA-GARKVIAVDPVEFKREQALKFGATHAF------ASMEEAVQ 243

Query: 247 KIQKAM-GTGIDVSFDCAGLNK--TMSTALGATCAGGKVCLVGMGHHE---MTVPLTPAA 300
            +++   G G D +    G      ++ AL AT  GG+V + G+G      + V L    
Sbjct: 244 LVRELTNGQGADKTIITVGEVDGEHIAEALSATRKGGRVVVTGLGPMADVDVKVNLFELT 303

Query: 301 VREVDVVG-VFRYKNT---WPLCLELLRSGKIDVKPLVTHRFGFSQKEVEEAFE 350
           + + ++ G +F   N     P  LEL R+GK+ +  L+T    ++  ++ E ++
Sbjct: 304 LLQKELQGTLFGGANPRADIPRLLELYRAGKLKLDELITRT--YTLDQINEGYQ 355

This model describes a clade within the family pfam00107 of zinc-binding dehydrogenases. The family pfam00107 contains class III alcohol dehydrogenases, including enzymes designated S-(hydroxymethyl)glutathione dehydrogenase and NAD/mycothiol-dependent formaldehyde dehydrogenase. Members of the current family occur only in species that contain the very small protein mycofactocin (TIGR03969), a possible cofactor precursor, and radical SAM protein TIGR03962. We name this family for Rxyl_3153, where the lone member of the family co-clusters with these markers in Rubrobacter xylanophilus [Unknown function, Enzymes of unknown specificity]. Length = 369

>gnl|CDD|181842 PRK09422, PRK09422, ethanol-active dehydrogenase/acetaldehyde-active reductase; Provisional

 Score =  105 bits (265), Expect = 7e-26
 Identities = 83/276 (30%), Positives = 141/276 (51%), Gaps = 13/276 (4%)

Query: 35  ELPSLGPYDVLVRMKAVGICGSDVHYLKTLRCADFVVKEPMVIGHECAGVIEKVGSEVKT 94
            L  L   + LV+M+  G+C +D+H    +   DF  K   ++GHE  G++++VG  V +
Sbjct: 19  TLRPLKHGEALVKMEYCGVCHTDLH----VANGDFGDKTGRILGHEGIGIVKEVGPGVTS 74

Query: 95  LVPGDRVALEPGI-SCWRCDHCKGGRYNLCPEMKFFATPPVHGSLANQVVHPADLCFKLP 153
           L  GDRV++      C  C++C  GR  LC  +K  A   V G +A Q +  AD   K+P
Sbjct: 75  LKVGDRVSIAWFFEGCGHCEYCTTGRETLCRSVK-NAGYTVDGGMAEQCIVTADYAVKVP 133

Query: 154 DNVSLEEGAMCEPLSVGLH-ACRRANIGPETNVLIMGAGPIGLVTMLGAPRAFGAPRIVI 212
           + +   + +      V  + A + + I P   + I GAG +G + +  A   F A +++ 
Sbjct: 134 EGLDPAQASSITCAGVTTYKAIKVSGIKPGQWIAIYGAGGLGNLALQYAKNVFNA-KVIA 192

Query: 213 VDVDDYRLSVAKEIGADNIVKVSTNLQDIAEEVEKIQKAMGTGIDVSFDCAGLNKTMSTA 272
           VD++D +L++AKE+GAD  +  S  ++D+A+    IQ+  G G   +   A      + A
Sbjct: 193 VDINDDKLALAKEVGADLTIN-SKRVEDVAKI---IQEKTG-GAHAAVVTAVAKAAFNQA 247

Query: 273 LGATCAGGKVCLVGMGHHEMTVPLTPAAVREVDVVG 308
           + A  AGG+V  VG+    M + +    +  ++VVG
Sbjct: 248 VDAVRAGGRVVAVGLPPESMDLSIPRLVLDGIEVVG 283

Length = 338

>gnl|CDD|176258 cd08298, CAD2, Cinnamyl alcohol dehydrogenases (CAD)

 Score =  104 bits (263), Expect = 1e-25
 Identities = 64/222 (28%), Positives = 103/222 (46%), Gaps = 20/222 (9%)

Query: 19  MAAWLL------GVNTLKIQPFELPSLGPYDVLVRMKAVGICGSDVHYLKTLRCADFVV- 71
           M A +L        N L++    +P  GP +VL++++A G+C +D+H ++     D    
Sbjct: 1   MKAMVLEKPGPIEENPLRLTEVPVPEPGPGEVLIKVEACGVCRTDLHIVE----GDLPPP 56

Query: 72  KEPMVIGHECAGVIEKVGSEVKTLVPGDRVALEP-GISCWRCDHCKGGRYNLCPEMKFFA 130
           K P++ GHE  G +E VG  V     GDRV +   G +C  C +C+ GR NLC   +F  
Sbjct: 57  KLPLIPGHEIVGRVEAVGPGVTRFSVGDRVGVPWLGSTCGECRYCRSGRENLCDNARFTG 116

Query: 131 TPPVHGSLANQVVHPADLCFKLPDNVSLEEGA--MCEPLSVGLHACRRANIGPETNVLIM 188
              V G  A  +V      + +P++   EE A  +C  + +G  A + A + P   + + 
Sbjct: 117 Y-TVDGGYAEYMVADERFAYPIPEDYDDEEAAPLLCAGI-IGYRALKLAGLKPGQRLGLY 174

Query: 189 GAGPIG-LVTMLGAPRAFGAPRIVIVDVDDYRLSVAKEIGAD 229
           G G    L   +   R  GA  +           +A+E+GAD
Sbjct: 175 GFGASAHLALQIA--RYQGA-EVFAFTRSGEHQELARELGAD 213

These alcohol dehydrogenases are related to the cinnamyl alcohol dehydrogenases (CAD), members of the medium chain dehydrogenase/reductase family. NAD(P)(H)-dependent oxidoreductases are the major enzymes in the interconversion of alcohols and aldehydes, or ketones. Cinnamyl alcohol dehydrogenases (CAD) reduce cinnamaldehydes to cinnamyl alcohols in the last step of monolignal metabolism in plant cells walls. CAD binds 2 zinc ions and is NADPH- dependent. CAD family members are also found in non-plant species, e.g. in yeast where they have an aldehyde reductase activity. The medium chain dehydrogenases/reductase (MDR)/zinc-dependent alcohol dehydrogenase-like family, which contains the zinc-dependent alcohol dehydrogenase (ADH-Zn) and related proteins, is a diverse group of proteins related to the first identified member, class I mammalian ADH. MDRs display a broad range of activities and are distinguished from the smaller short chain dehydrogenases (~ 250 amino acids vs. the ~ 350 amino acids of the MDR). The MDR proteins have 2 domains: a C-terminal NAD(P) binding-Rossmann fold domain of a beta-alpha form and an N-terminal catalytic domain with distant homology to GroES. The MDR group contains a host of activities, including the founding alcohol dehydrogenase (ADH), quinone reductase, sorbitol dehydrogenase, formaldehyde dehydrogenase, butanediol DH, ketose reductase, cinnamyl reductase, and numerous others. The zinc-dependent alcohol dehydrogenases (ADHs) catalyze the NAD(P)(H)-dependent interconversion of alcohols to aldehydes or ketones. Active site zinc has a catalytic role, while structural zinc aids in stability. ADH-like proteins typically form dimers (typically higher plants, mammals) or tetramers (yeast, bacteria), and generally have 2 tightly bound zinc atoms per subunit. The active site zinc is coordinated by a histidine, two cysteines, and a water molecule. The second zinc seems to play a structural role, affects subunit interactions, and is typically coordinated by 4 cysteines. Length = 329

>gnl|CDD|176203 cd08241, QOR1, Quinone oxidoreductase (QOR)

 Score =  102 bits (258), Expect = 6e-25
 Identities = 91/340 (26%), Positives = 138/340 (40%), Gaps = 69/340 (20%)

Query: 44  VLVRMKAVGICGSDVHYLKTLRCAD---FVVKEPMVIGHECAGVIEKVGSEVKTLVPGDR 100
           V +R++A G+   D+     L            P V G E AGV+E VG  V     GDR
Sbjct: 30  VRIRVEAAGVNFPDL-----LMIQGKYQVKPPLPFVPGSEVAGVVEAVGEGVTGFKVGDR 84

Query: 101 VALEPGISCWRCDHCKGGRYNLCPEMKFFATPPVHGSLANQVVHPADLCFKLPDNVSLEE 160
           V                            A     G  A +VV PA   F LPD +S EE
Sbjct: 85  V---------------------------VALTG-QGGFAEEVVVPAAAVFPLPDGLSFEE 116

Query: 161 GAMCEPLS-----VGLHACRRANIGPETNVLIMGA-GPIGLVT-MLGAPRAFGAPRIVIV 213
            A   P++       L   RRA + P   VL++GA G +GL    L   +A GA R++  
Sbjct: 117 AA-ALPVTYGTAYHALV--RRARLQPGETVLVLGAAGGVGLAAVQLA--KALGA-RVIAA 170

Query: 214 DVDDYRLSVAKEIGADNIVKVSTNLQDIAEEVEKIQKAMGTGIDVSFDCAGLNKTMSTAL 273
              + +L++A+ +GAD+++       D+ E V+ +    G G+DV +D  G       +L
Sbjct: 171 ASSEEKLALARALGADHVIDYRD--PDLRERVKALTG--GRGVDVVYDPVGG-DVFEASL 225

Query: 274 GATCAGGKVCLVGM-GHHEMTVPLTPAAVREVDVVGVF----------RYKNTWPLCLEL 322
            +   GG++ ++G        +P     ++ + VVGV+            +       +L
Sbjct: 226 RSLAWGGRLLVIGFASGEIPQIPANLLLLKNISVVGVYWGAYARREPELLRANLAELFDL 285

Query: 323 LRSGKIDVKPLVTHRFGFSQKEVEEAFETSARGGTAIKVM 362
           L  GKI  +P V+  F   Q    EA    A      KV+
Sbjct: 286 LAEGKI--RPHVSAVFPLEQ--AAEALRALADRKATGKVV 321

QOR catalyzes the conversion of a quinone + NAD(P)H to a hydroquinone + NAD(P)+. Quinones are cyclic diones derived from aromatic compounds. Membrane bound QOR acts in the respiratory chains of bacteria and mitochondria, while soluble QOR acts to protect from toxic quinones (e.g. DT-diaphorase) or as a soluble eye-lens protein in some vertebrates (e.g. zeta-crystalin). QOR reduces quinones through a semi-quinone intermediate via a NAD(P)H-dependent single electron transfer. QOR is a member of the medium chain dehydrogenase/reductase family, but lacks the zinc-binding sites of the prototypical alcohol dehydrogenases of this group. NAD(P)(H)-dependent oxidoreductases are the major enzymes in the interconversion of alcohols and aldehydes, or ketones. Alcohol dehydrogenase in the liver converts ethanol and NAD+ to acetaldehyde and NADH, while in yeast and some other microorganisms ADH catalyzes the conversion acetaldehyde to ethanol in alcoholic fermentation. ADH is a member of the medium chain alcohol dehydrogenase family (MDR), which has a NAD(P)(H)-binding domain in a Rossmann fold of a beta-alpha form. The NAD(H)-binding region is comprised of 2 structurally similar halves, each of which contacts a mononucleotide. A GxGxxG motif after the first mononucleotide contact half allows the close contact of the coenzyme with the ADH backbone. The N-terminal catalytic domain has a distant homology to GroES. These proteins typically form dimers (typically higher plants, mammals) or tetramers (yeast, bacteria), and have 2 tightly bound zinc atoms per subunit, a catalytic zinc at the active site, and a structural zinc in a lobe of the catalytic domain. NAD(H)-binding occurs in the cleft between the catalytic and coenzyme-binding domains at the active site, and coenzyme binding induces a conformational closing of this cleft. Coenzyme binding typically precedes and contributes to substrate binding. In human ADH catalysis, the zinc ion helps coordinate the alcohol, followed by deprotonation of a histidine, the ribose of NAD, a serine, then the alcohol, which allows the transfer of a hydride to NAD+, creating NADH and a zinc-bound aldehyde or ketone. In yeast and some bacteria, the active site zinc binds an aldehyde, polarizing it, and leading to the reverse reaction. Length = 323

>gnl|CDD|176189 cd05286, QOR2, Quinone oxidoreductase (QOR)

 Score =  100 bits (253), Expect = 3e-24
 Identities = 79/270 (29%), Positives = 112/270 (41%), Gaps = 50/270 (18%)

Query: 25  GVNTLKIQPFELPSLGPYDVLVRMKAVGICGSDVHYLKTLRCADFVVKEPMVIGHECAGV 84
           G   L+ +   +P  GP +VLVR  A+G+   D ++   L         P V+G E AGV
Sbjct: 10  GPEVLEYEDVPVPEPGPGEVLVRNTAIGVNFIDTYFRSGLYPLPL----PFVLGVEGAGV 65

Query: 85  IEKVGSEVKTLVPGDRVALEPGISCWRCDHCKGGRYNLCPEMKFFATPPVHGSLANQVVH 144
           +E VG  V     GDRVA                          +A PP  G+ A   V 
Sbjct: 66  VEAVGPGVTGFKVGDRVA--------------------------YAGPP--GAYAEYRVV 97

Query: 145 PADLCFKLPDNVSLEEGAMCEPLSVGLHA---CRRA-NIGPETNVLIMG-AGPIG--LVT 197
           PA    KLPD +S E  A    L  GL A    R    + P   VL+   AG +G  L  
Sbjct: 98  PASRLVKLPDGISDETAAAL--LLQGLTAHYLLRETYPVKPGDTVLVHAAAGGVGLLLTQ 155

Query: 198 MLGAPRAFGAPRIVIVDVDDYRLSVAKEIGADNIVKVSTNLQDIAEEVEKIQKAMGTGID 257
                +A GA  I  V  ++ +  +A+  GAD+++    + +D  E V +I    G G+D
Sbjct: 156 WA---KALGATVIGTVSSEE-KAELARAAGADHVI-NYRD-EDFVERVREITG--GRGVD 207

Query: 258 VSFDCAGLNKTMSTALGATCAGGKVCLVGM 287
           V +D  G   T   +L +    G +   G 
Sbjct: 208 VVYDGVG-KDTFEGSLDSLRPRGTLVSFGN 236

Quinone oxidoreductase (QOR) and 2-haloacrylate reductase. QOR catalyzes the conversion of a quinone + NAD(P)H to a hydroquinone + NAD(P)+. Quinones are cyclic diones derived from aromatic compounds. Membrane bound QOR actin the respiratory chains of bacteria and mitochondria, while soluble QOR acts to protect from toxic quinones (e.g. DT-diaphorase) or as a soluble eye-lens protein in some vertebrates (e.g. zeta-crystalin). QOR reduces quinones through a semi-quinone intermediate via a NAD(P)H-dependent single electron transfer. QOR is a member of the medium chain dehydrogenase/reductase family, but lacks the zinc-binding sites of the prototypical alcohol dehydrogenases of this group. 2-haloacrylate reductase, a member of this subgroup, catalyzes the NADPH-dependent reduction of a carbon-carbon double bond in organohalogen compounds. Although similar to QOR, Burkholderia 2-haloacrylate reductase does not act on the quinones 1,4-benzoquinone and 1,4-naphthoquinone. NAD(P)(H)-dependent oxidoreductases are the major enzymes in the interconversion of alcohols and aldehydes, or ketones. Alcohol dehydrogenase in the liver converts ethanol and NAD+ to acetaldehyde and NADH, while in yeast and some other microorganisms ADH catalyzes the conversion acetaldehyde to ethanol in alcoholic fermentation. ADH is a member of the medium chain alcohol dehydrogenase family (MDR), which have a NAD(P)(H)-binding domain in a Rossmann fold of a beta-alpha form. The NAD(H)-binding region is comprised of 2 structurally similar halves, each of which contacts a mononucleotide. A GxGxxG motif after the first mononucleotide contact half allows the close contact of the coenzyme with the ADH backbone. The N-terminal catalytic domain has a distant homology to GroES. These proteins typically form dimers (typically higher plants, mammals) or tetramers (yeast, bacteria), and have 2 tightly bound zinc atoms per subunit, a catalytic zinc at the active site and a structural zinc in a lobe of the catalytic domain. NAD(H) binding occurs in the cleft between the catalytic and coenzyme-binding domains at the active site, and coenzyme binding induces a conformational closing of this cleft. Coenzyme binding typically precedes and contributes to substrate binding. In human ADH catalysis, the zinc ion helps coordinate the alcohol, followed by deprotonation of a histidine, the ribose of NAD, a serine, then the alcohol, which allows the transfer of a hydride to NAD+, creating NADH and a zinc-bound aldehyde or ketone. In yeast and some bacteria, the active site zinc binds an aldehyde, polarizing it, and leading to the reverse reaction. Length = 320

>gnl|CDD|176211 cd08249, enoyl_reductase_like, enoyl_reductase_like

 Score =  100 bits (251), Expect = 6e-24
 Identities = 90/375 (24%), Positives = 132/375 (35%), Gaps = 86/375 (22%)

Query: 20  AAWLLGVNTLKIQPFE--LPSLGPYDVLVRMKAVGICGSDVHYLKTLRCADFVVKEPMVI 77
           AA L G     +   +  +P  GP +VLV++KAV +   D  +        F+   P ++
Sbjct: 3   AAVLTGPGGGLLVVVDVPVPKPGPDEVLVKVKAVALNPVDWKHQD----YGFIPSYPAIL 58

Query: 78  GHECAGVIEKVGSEVKTLVPGDRVALEPGISCWRCDHCKGGRYNLCPEMKFFATPPVHGS 137
           G + AG + +VGS V     GDRVA              GG  N           P +G+
Sbjct: 59  GCDFAGTVVEVGSGVTRFKVGDRVAG----------FVHGGNPN----------DPRNGA 98

Query: 138 LANQVVHPADLCFKLPDNVSLEEGA------------MCEPLSVGLHACRRANIGPETNV 185
               VV  ADL  K+PDN+S EE A            + + L + L   + +       V
Sbjct: 99  FQEYVVADADLTAKIPDNISFEEAATLPVGLVTAALALFQKLGLPLPPPKPSPASKGKPV 158

Query: 186 LIMGAG-PIGLVTMLGAPRAFGAPRIVIVDVDDYRLSVA--------KEIGADNIV--KV 234
           LI G    +G + +  A +  G    VI          A        K +GAD +     
Sbjct: 159 LIWGGSSSVGTLAIQLA-KLAGYK--VIT--------TASPKNFDLVKSLGADAVFDYHD 207

Query: 235 STNLQDIAEEVEKIQKAMGTGIDVSFDCAGLNKTMSTALGATCAGGKVCLVGMGHHEMTV 294
                     VE I+ A G  +  + DC    ++      A    G   LV +    + V
Sbjct: 208 PD-------VVEDIRAATGGKLRYALDCISTPESAQLCAEALGRSGGGKLVSL----LPV 256

Query: 295 PLTPAAVREVDVVGVFRYKNT-------------WPLCLELLRSGKIDVKPLVTHRFGFS 341
           P      + V V  V  Y                W    ELL  GK+   P+     G  
Sbjct: 257 PEETEPRKGVKVKFVLGYTVFGEIPEDREFGEVFWKYLPELLEEGKLKPHPVRVVEGGLE 316

Query: 342 QKEVEEAFETSARGG 356
              V+E  +   +G 
Sbjct: 317 G--VQEGLDLLRKGK 329

Member identified as possible enoyl reductase of the MDR family. 2-enoyl thioester reductase (ETR) catalyzes the NADPH-dependent dependent conversion of trans-2-enoyl acyl carrier protein/coenzyme A (ACP/CoA) to acyl-(ACP/CoA) in fatty acid synthesis. 2-enoyl thioester reductase activity has been linked in Candida tropicalis as essential in maintaining mitiochondrial respiratory function. This ETR family is a part of the medium chain dehydrogenase/reductase family, but lack the zinc coordination sites characteristic of the alcohol dehydrogenases in this family. NAD(P)(H)-dependent oxidoreductases are the major enzymes in the interconversion of alcohols and aldehydes, or ketones. Alcohol dehydrogenase in the liver converts ethanol and NAD+ to acetaldehyde and NADH, while in yeast and some other microorganisms ADH catalyzes the conversion acetaldehyde to ethanol in alcoholic fermentation. ADH is a member of the medium chain alcohol dehydrogenase family (MDR), which has a NAD(P)(H)-binding domain in a Rossmann fold of a beta-alpha form. The NAD(H)-binding region is comprised of 2 structurally similar halves, each of which contacts a mononucleotide. The N-terminal catalytic domain has a distant homology to GroES. These proteins typically form dimers (typically higher plants, mammals) or tetramers (yeast, bacteria), and have 2 tightly bound zinc atoms per subunit, a catalytic zinc at the active site, and a structural zinc in a lobe of the catalytic domain. NAD(H)-binding occurs in the cleft between the catalytic and coenzyme-binding domains at the active site, and coenzyme binding induces a conformational closing of this cleft. Coenzyme binding typically precedes and contributes to substrate binding. Candida tropicalis enoyl thioester reductase (Etr1p) catalyzes the NADPH-dependent reduction of trans-2-enoyl thioesters in mitochondrial fatty acid synthesis. Etr1p forms homodimers with each subunit containing a nucleotide-binding Rossmann fold domain and a catalytic domain. Length = 339

>gnl|CDD|131865 TIGR02818, adh_III_F_hyde, S-(hydroxymethyl)glutathione dehydrogenase/class III alcohol dehydrogenase

 Score =   99 bits (249), Expect = 2e-23
 Identities = 98/361 (27%), Positives = 153/361 (42%), Gaps = 40/361 (11%)

Query: 19  MAAWLLGVNTLKIQPFELPSLGPYDVLVRMKAVGICGSDVHYLKTLRCADFVVKEPMVIG 78
             AW  G   LKI+  ++      +VLVR+ A G+C +D     TL  AD     P+++G
Sbjct: 5   AVAWAAG-QPLKIEEVDVEMPQKGEVLVRIVATGVCHTDAF---TLSGADPEGVFPVILG 60

Query: 79  HECAGVIEKVGSEVKTLVPGDRVALEPGISCWRCDHCKGGRYNLCPEMK----------- 127
           HE AG++E VG  V ++  GD V       C  C  C  G+ NLC  ++           
Sbjct: 61  HEGAGIVEAVGEGVTSVKVGDHVIPLYTAECGECKFCLSGKTNLCVAVRETQGKGLMPDG 120

Query: 128 ----FFATPPVH-----GSLANQVVHPADLCFKLPDNVSLEEGAM--CEPLSVGLHAC-R 175
                    P++      + +   V P     K+     LEE  +  C  ++ G+ A   
Sbjct: 121 TSRFSKDGQPIYHYMGCSTFSEYTVVPEISLAKINPAAPLEEVCLLGCG-VTTGIGAVLN 179

Query: 176 RANIGPETNVLIMGAGPIGLVTMLGAPRAFGAPRIVIVDVDDYRLSVAKEIGADNIVKVS 235
            A +     V + G G IGL  + GA  A  A RI+ +D++  +  +AK++GA + V  +
Sbjct: 180 TAKVEEGDTVAVFGLGGIGLSVIQGARMA-KASRIIAIDINPAKFELAKKLGATDCVNPN 238

Query: 236 TNLQDIAEEVEKIQKAMGTGIDVSFDCAGLNKTMSTALGATCAG-GKVCLVGM---GHHE 291
              + I E + +I      G+D SF+C G    M  AL     G G+  ++G+   G   
Sbjct: 239 DYDKPIQEVIVEITDG---GVDYSFECIGNVNVMRAALECCHKGWGESIIIGVAGAGQEI 295

Query: 292 MTVP--LTPAAVREVDVVGVFRYKNTWPLCLELLRSGKIDVKPLVTHRFGFSQKEVEEAF 349
            T P  L    V      G  + +   P  +E    G+I +   VTH        + EAF
Sbjct: 296 STRPFQLVTGRVWRGSAFGGVKGRTELPGIVEQYMKGEIALDDFVTHTMPLED--INEAF 353

Query: 350 E 350
           +
Sbjct: 354 D 354

The members of this protein family show dual function. First, they remove formaldehyde, a toxic metabolite, by acting as S-(hydroxymethyl)glutathione dehydrogenase (1.1.1.284). S-(hydroxymethyl)glutathione can form spontaneously from formaldehyde and glutathione, and so this enzyme previously was designated glutathione-dependent formaldehyde dehydrogenase. These same proteins are also designated alcohol dehydrogenase (EC 1.1.1.1) of class III, for activities that do not require glutathione; they tend to show poor activity for ethanol among their various substrate alcohols [Cellular processes, Detoxification, Energy metabolism, Fermentation]. Length = 368

>gnl|CDD|176260 cd08300, alcohol_DH_class_III, class III alcohol dehydrogenases

 Score = 98.5 bits (246), Expect = 4e-23
 Identities = 92/337 (27%), Positives = 151/337 (44%), Gaps = 41/337 (12%)

Query: 44  VLVRMKAVGICGSDVHYLKTLRCADFVVKEPMVIGHECAGVIEKVGSEVKTLVPGDRVAL 103
           V +++ A G+C +D +   TL  AD     P+++GHE AG++E VG  V ++ PGD V  
Sbjct: 30  VRIKILATGVCHTDAY---TLSGADPEGLFPVILGHEGAGIVESVGEGVTSVKPGDHVIP 86

Query: 104 EPGISCWRCDHCKGGRYNLCPEMKFF----------------ATPPVH----GSLAN-QV 142
                C  C  CK G+ NLC +++                    P  H     + +   V
Sbjct: 87  LYTPECGECKFCKSGKTNLCQKIRATQGKGLMPDGTSRFSCKGKPIYHFMGTSTFSEYTV 146

Query: 143 VHPADLCFKLPDNVSLEEGAM--CEPLSVGLHAC-RRANIGPETNVLIMGAGPIGLVTML 199
           V    +  K+     L++  +  C  ++ G  A    A + P + V + G G +GL  + 
Sbjct: 147 VAEISVA-KINPEAPLDKVCLLGCG-VTTGYGAVLNTAKVEPGSTVAVFGLGAVGLAVIQ 204

Query: 200 GAPRAFGAPRIVIVDVDDYRLSVAKEIGADNIVKVSTNLQDIAEEVEKIQKAMGTGIDVS 259
           GA  A GA RI+ +D++  +  +AK+ GA + V    + + I    + + +    G+D +
Sbjct: 205 GAKAA-GASRIIGIDINPDKFELAKKFGATDCVNPKDHDKPI---QQVLVEMTDGGVDYT 260

Query: 260 FDCAGLNKTMSTALGATCAG-GKVCLVGM---GHHEMTVP--LTPAAVREVDVVGVFRYK 313
           F+C G  K M  AL A   G G   ++G+   G    T P  L    V +    G ++ +
Sbjct: 261 FECIGNVKVMRAALEACHKGWGTSVIIGVAAAGQEISTRPFQLVTGRVWKGTAFGGWKSR 320

Query: 314 NTWPLCLELLRSGKIDVKPLVTHRFGFSQKEVEEAFE 350
           +  P  +E    GKI V   +TH       E+ EAF+
Sbjct: 321 SQVPKLVEDYMKGKIKVDEFITHTMPL--DEINEAFD 355

Members identified as glutathione-dependent formaldehyde dehydrogenase(FDH), a member of the zinc dependent/medium chain alcohol dehydrogenase family. FDH converts formaldehyde and NAD(P) to formate and NAD(P)H. The initial step in this process the spontaneous formation of a S-(hydroxymethyl)glutathione adduct from formaldehyde and glutathione, followed by FDH-mediated oxidation (and detoxification) of the adduct to S-formylglutathione. MDH family uses NAD(H) as a cofactor in the interconversion of alcohols and aldehydes or ketones. Like many zinc-dependent alcohol dehydrogenases (ADH) of the medium chain alcohol dehydrogenase/reductase family (MDR), these FDHs form dimers, with 4 zinc ions per dimer. The medium chain alcohol dehydrogenase family (MDR) have a NAD(P)(H)-binding domain in a Rossmann fold of a beta-alpha form. The N-terminal region typically has an all-beta catalytic domain. These proteins typically form dimers (typically higher plants, mammals) or tetramers (yeast, bacteria), and have 2 tightly bound zinc atoms per subunit. Alcohol dehydrogenase in the liver converts ethanol and NAD+ to acetaldehyde and NADH, while in yeast and some other microorganisms ADH catalyzes the conversion acetaldehyde to ethanol in alcoholic fermentation. ADH is a member of the medium chain alcohol dehydrogenase family (MDR), which have a NAD(P)(H)-binding domain in a Rossmann fold of a beta-alpha form. The NAD(H)-binding region is comprised of 2 structurally similar halves, each of which contacts a mononucleotide. A GxGxxG motif after the first mononucleotide contact half allows the close contact of the coenzyme with the ADH backbone. The N-terminal catalytic domain has a distant homology to GroES. These proteins typically form dimers (typically higher plants, mammals) or tetramers (yeast, bacteria), and have 2 tightly bound zinc atoms per subunit, a catalytic zinc at the active site and a structural zinc in a lobe of the catalytic domain. NAD(H) binding occurs in the cleft between the catalytic and coenzyme-binding domains at the active site, and coenzyme binding induces a conformational closing of this cleft. Coenzyme binding typically precedes and contributes to substrate binding. Length = 368

>gnl|CDD|176237 cd08276, MDR7, Medium chain dehydrogenases/reductase (MDR)/zinc-dependent alcohol dehydrogenase-like family

 Score = 97.6 bits (244), Expect = 6e-23
 Identities = 100/364 (27%), Positives = 157/364 (43%), Gaps = 53/364 (14%)

Query: 19  MAAWLL----GVNTLKIQPFELPSLGPYDVLVRMKAVGICGSDV-----HYLKTLRCADF 69
           M AW L    G++ LK+    +P  GP +VLVR+ AV +   D+      Y         
Sbjct: 1   MKAWRLSGGGGLDNLKLVEEPVPEPGPGEVLVRVHAVSLNYRDLLILNGRYP-------P 53

Query: 70  VVKEPMVIGHECAGVIEKVGSEVKTLVPGDRVALEPGISCWRCDHCKGGRYNLCPEMKFF 129
            VK+P++   + AG +  VG  V     GDRV     +  +  +   G       E +  
Sbjct: 54  PVKDPLIPLSDGAGEVVAVGEGVTRFKVGDRV-----VPTFFPNWLDGP---PTAEDEAS 105

Query: 130 AT-PPVHGSLANQVVHPADLCFKLPDNVSLEEGAMCEPLSVGLHA----CRRANIGPETN 184
           A   P+ G LA  VV P +   + PD++S EE A   P + GL A         + P   
Sbjct: 106 ALGGPIDGVLAEYVVLPEEGLVRAPDHLSFEEAA-TLPCA-GLTAWNALFGLGPLKPGDT 163

Query: 185 VLIMGAGPIGLVTMLGA--PRAFGAPRIVIVDVDDYRLSVAKEIGADNIVKVSTNLQDIA 242
           VL+ G G  G V++      +A GA R++     D +L  AK +GAD+++   T   D  
Sbjct: 164 VLVQGTG--G-VSLFALQFAKAAGA-RVIATSSSDEKLERAKALGADHVINYRTTP-DWG 218

Query: 243 EEVEKIQKAMGTGIDVSFDCAGLNKTMSTALGATCAGGKVCLVG-MGHHEMTVPLTPAAV 301
           EEV K+    G G+D   +  G   T++ ++ A   GG + L+G +   E  V L P   
Sbjct: 219 EEVLKLTG--GRGVDHVVEVGG-PGTLAQSIKAVAPGGVISLIGFLSGFEAPVLLLPLLT 275

Query: 302 REVDVVGVF---RYKNTWPLCLELLRS-GKIDVKPLVTHRFGFSQKEVEEAFETSARGGT 357
           +   + G+    R          + R+     ++P++   F F  +E +EA+     G  
Sbjct: 276 KGATLRGIAVGSR-----AQFEAMNRAIEAHRIRPVIDRVFPF--EEAKEAYRYLESGSH 328

Query: 358 AIKV 361
             KV
Sbjct: 329 FGKV 332

This group is a member of the medium chain dehydrogenases/reductase (MDR)/zinc-dependent alcohol dehydrogenase-like family, but lacks the zinc-binding sites of the zinc-dependent alcohol dehydrogenases. The medium chain dehydrogenases/reductase (MDR)/zinc-dependent alcohol dehydrogenase-like family, which contains the zinc-dependent alcohol dehydrogenase (ADH-Zn) and related proteins, is a diverse group of proteins related to the first identified member, class I mammalian ADH. MDRs display a broad range of activities and are distinguished from the smaller short chain dehydrogenases (~ 250 amino acids vs. the ~ 350 amino acids of the MDR). The MDR proteins have 2 domains: a C-terminal NAD(P)-binding Rossmann fold domain of a beta-alpha form and an N-terminal catalytic domain with distant homology to GroES. The MDR group contains a host of activities, including the founding alcohol dehydrogenase (ADH), quinone reductase, sorbitol dehydrogenase, formaldehyde dehydrogenase, butanediol DH, ketose reductase, cinnamyl reductase, and numerous others. The zinc-dependent alcohol dehydrogenases (ADHs) catalyze the NAD(P)(H)-dependent interconversion of alcohols to aldehydes or ketones. Active site zinc has a catalytic role, while structural zinc aids in stability. ADH-like proteins typically form dimers (typically higher plants, mammals) or tetramers (yeast, bacteria), and generally have 2 tightly bound zinc atoms per subunit. The active site zinc is coordinated by a histidine, two cysteines, and a water molecule. The second zinc seems to play a structural role, affects subunit interactions, and is typically coordinated by 4 cysteines. Length = 336

>gnl|CDD|176225 cd08264, Zn_ADH_like2, Alcohol dehydrogenases of the MDR family

 Score = 96.7 bits (241), Expect = 1e-22
 Identities = 85/284 (29%), Positives = 127/284 (44%), Gaps = 40/284 (14%)

Query: 19  MAAWLL---GVNTLKIQPFELPSLGPYDVLVRMKAVGICGSDVHYLKTLRCADFVVKEPM 75
           M A +    G+  LK++  + P  GP +VL+R+K  G+   D          + V  +PM
Sbjct: 1   MKALVFEKSGIENLKVEDVKDPKPGPGEVLIRVKMAGVNPVD------YNVINAVKVKPM 54

Query: 76  --VIGHECAGVIEKVGSEVKTLVPGDRVALEPGISCWRCDHCKGGRYNLCPEMKFFATPP 133
             + G E AGV+E+VG  VK +  GDRV +   +    CD C  G   LC          
Sbjct: 55  PHIPGAEFAGVVEEVGDHVKGVKKGDRVVVYNRVFDGTCDMCLSGNEMLCRNGGIIGV-V 113

Query: 134 VHGSLANQVVHPADLCFKLPDNVSLEEGAMCEPLSVG----LHACRRANIGPETNVLIMG 189
            +G  A  +V P    FK+PD++S E  A    L V      HA + A +GP   V++ G
Sbjct: 114 SNGGYAEYIVVPEKNLFKIPDSISDELAA---SLPVAALTAYHALKTAGLGPGETVVVFG 170

Query: 190 A-GPIGLVTMLGAPRAFGAPRIVIVDVDDYRLSVAKEIGADNIVKVSTNLQDIAEEVEKI 248
           A G  G+  +  A +  GA  I +      R    KE GAD +V       ++ E+V++I
Sbjct: 171 ASGNTGIFAVQLA-KMMGAEVIAVS-----RKDWLKEFGADEVVDYD----EVEEKVKEI 220

Query: 249 QK-------AMGTGI-DVSFDCAGLNKTMSTALGATCAGGKVCL 284
            K       ++G+   D+S    G    + T    T  GG+V L
Sbjct: 221 TKMADVVINSLGSSFWDLSLSVLGRGGRLVTFGTLT--GGEVKL 262

This group resembles the zinc-dependent alcohol dehydrogenases of the medium chain dehydrogenase family. However, this subgroup does not contain the characteristic catalytic zinc site. Also, it contains an atypical structural zinc-binding pattern: DxxCxxCxxxxxxxC. NAD(P)(H)-dependent oxidoreductases are the major enzymes in the interconversion of alcohols and aldehydes, or ketones. Alcohol dehydrogenase in the liver converts ethanol and NAD+ to acetaldehyde and NADH, while in yeast and some other microorganisms ADH catalyzes the conversion acetaldehyde to ethanol in alcoholic fermentation. ADH is a member of the medium chain alcohol dehydrogenase family (MDR), which has a NAD(P)(H)-binding domain in a Rossmann fold of a beta-alpha form. The NAD(H)-binding region is comprised of 2 structurally similar halves, each of which contacts a mononucleotide. A GxGxxG motif after the first mononucleotide contact half allows the close contact of the coenzyme with the ADH backbone. The N-terminal catalytic domain has a distant homology to GroES. These proteins typically form dimers (typically higher plants, mammals) or tetramers (yeast, bacteria), and have 2 tightly bound zinc atoms per subunit, a catalytic zinc at the active site and a structural zinc in a lobe of the catalytic domain. NAD(H)-binding occurs in the cleft between the catalytic and coenzyme-binding domains at the active site, and coenzyme binding induces a conformational closing of this cleft. Coenzyme binding typically precedes and contributes to substrate binding. In human ADH catalysis, the zinc ion helps coordinate the alcohol, followed by deprotonation of a histidine, the ribose of NAD, a serine, then the alcohol, which allows the transfer of a hydride to NAD+, creating NADH and a zinc-bound aldehyde or ketone. In yeast and some bacteria, the active site zinc binds an aldehyde, polarizing it, and leading to the reverse reaction. Length = 325

>gnl|CDD|215721 pfam00107, ADH_zinc_N, Zinc-binding dehydrogenase

 Score = 92.0 bits (229), Expect = 1e-22
 Identities = 43/134 (32%), Positives = 70/134 (52%), Gaps = 7/134 (5%)

Query: 192 PIGLVTMLGAPRAFGAPRIVIVDVDDYRLSVAKEIGADNIVKVSTNLQDIAEEVEKIQKA 251
            +GL  +  A +A GA R++ VD  + +L +AKE+GAD+++      +D  E V ++   
Sbjct: 1   GVGLAAVQLA-KALGAARVIAVDRSEEKLELAKELGADHVINYRD--EDFVERVRELTG- 56

Query: 252 MGTGIDVSFDCAGLNKTMSTALGATCAGGKVCLVGM-GHHEMTVPLTPAAVREVDVVGVF 310
            G G+DV  DC G   T+  AL     GG+V +VG+ G   +  PL    ++E+ ++G  
Sbjct: 57  -GRGVDVVIDCVGAPATLEQALELLRPGGRVVVVGLPGGAPVPFPLRDLLLKELTILGSL 115

Query: 311 RYK-NTWPLCLELL 323
                 +   LELL
Sbjct: 116 GGGREEFEEALELL 129

Length = 131

>gnl|CDD|176233 cd08272, MDR6, Medium chain dehydrogenases/reductase (MDR)/zinc-dependent alcohol dehydrogenase-like family

 Score = 95.7 bits (239), Expect = 3e-22
 Identities = 95/353 (26%), Positives = 133/353 (37%), Gaps = 65/353 (18%)

Query: 29  LKIQPFELPSLGPYDVLVRMKAVGICGSDVHYLKTLRCADFVVKEPMVIGHECAGVIEKV 88
            +++    P  GP  VLVR+ A G+   D    +    A      P ++G + AGV+E V
Sbjct: 15  FELREVPRPQPGPGQVLVRVHASGVNPLDTKIRR--GGAAARPPLPAILGCDVAGVVEAV 72

Query: 89  GSEVKTLVPGDRVALEPGISCWRCDHCKGGRYNLCPEMKFFATPPVHGSLANQVVHPADL 148
           G  V     GD V    G          GG                 GSLA   V  A L
Sbjct: 73  GEGVTRFRVGDEVYGCAGGL--------GGL---------------QGSLAEYAVVDARL 109

Query: 149 CFKLPDNVSLEEGAMCEPLSVGLHA----CRRANIGPETNVLIM-GAGPIGLVTMLGAPR 203
               P N+S+ E A   PL VG+ A      RA +     VLI  GAG +G V +  A +
Sbjct: 110 LALKPANLSMREAA-ALPL-VGITAWEGLVDRAAVQAGQTVLIHGGAGGVGHVAVQLA-K 166

Query: 204 AFGAPRIVIVDVDDYRLSVAKEIGADNIVKVSTNLQD-IAEEVEKIQKAMGTGIDVSFDC 262
           A GA   V       + + A+ +GAD I+     + + +AE         G G DV FD 
Sbjct: 167 AAGA--RVYATASSEKAAFARSLGADPIIYYRETVVEYVAEHTG------GRGFDVVFDT 218

Query: 263 AGLNKTMSTALGATCA-GGKVCLVGMGHHEMTVPLTPAAVREVDVVGVF----------R 311
            G  +T+  +  A    G  V ++G   H     L P + R     GVF          R
Sbjct: 219 VG-GETLDASFEAVALYGRVVSILGGATH----DLAPLSFRNATYSGVFTLLPLLTGEGR 273

Query: 312 YKNTWPL--CLELLRSGKIDVKPLV-THRFGFSQKEVEEAFETSARGGTAIKV 361
             +   L     L+  G++  +PL+    F     E   A      G    K+
Sbjct: 274 AHHGEILREAARLVERGQL--RPLLDPRTFPLE--EAAAAHARLESGSARGKI 322

This group is a member of the medium chain dehydrogenases/reductase (MDR)/zinc-dependent alcohol dehydrogenase-like family, but lacks the zinc-binding sites of the zinc-dependent alcohol dehydrogenases. The medium chain dehydrogenases/reductase (MDR)/zinc-dependent alcohol dehydrogenase-like family, which contains the zinc-dependent alcohol dehydrogenase (ADH-Zn) and related proteins, is a diverse group of proteins related to the first identified member, class I mammalian ADH. MDRs display a broad range of activities and are distinguished from the smaller short chain dehydrogenases (~ 250 amino acids vs. the ~ 350 amino acids of the MDR). The MDR proteins have 2 domains: a C-terminal NAD(P)-binding Rossmann fold domain of a beta-alpha form and an N-terminal catalytic domain with distant homology to GroES. The MDR group contains a host of activities, including the founding alcohol dehydrogenase (ADH), quinone reductase, sorbitol dehydrogenase, formaldehyde dehydrogenase, butanediol DH, ketose reductase, cinnamyl reductase, and numerous others. The zinc-dependent alcohol dehydrogenases (ADHs) catalyze the NAD(P)(H)-dependent interconversion of alcohols to aldehydes or ketones. Active site zinc has a catalytic role, while structural zinc aids in stability. ADH-like proteins typically form dimers (typically higher plants, mammals) or tetramers (yeast, bacteria), and generally have 2 tightly bound zinc atoms per subunit. The active site zinc is coordinated by a histidine, two cysteines, and a water molecule. The second zinc seems to play a structural role, affects subunit interactions, and is typically coordinated by 4 cysteines. Length = 326

>gnl|CDD|176215 cd08253, zeta_crystallin, Zeta-crystallin with NADP-dependent quinone reductase activity (QOR)

 Score = 95.7 bits (239), Expect = 3e-22
 Identities = 92/342 (26%), Positives = 137/342 (40%), Gaps = 60/342 (17%)

Query: 37  PSLGPYDVLVRMKAVGICGSDVHYLKTLRCADFVVKE--PMVIGHECAGVIEKVGSEVKT 94
           P+ GP +VLVR+ A G+   D +    +R   +      P V G + AGV+E VG  V  
Sbjct: 23  PTPGPGEVLVRVHASGVNPVDTY----IRAGAYPGLPPLPYVPGSDGAGVVEAVGEGVDG 78

Query: 95  LVPGDRVALEPGISCWRCDHCKGGRYNLCPEMKFFATPPVHGSLANQVVHPADLCFKLPD 154
           L  GDRV        W  +   G R                G+ A  VV PAD    LPD
Sbjct: 79  LKVGDRV--------WLTNLGWGRR---------------QGTAAEYVVVPADQLVPLPD 115

Query: 155 NVSLEEGAMCEPLSVGLHAC-------RRANIGPETNVLIMG-AGPIGLVTMLGAPRAFG 206
            VS E+GA     ++G+ A         RA       VL+ G +G +G   +  A R  G
Sbjct: 116 GVSFEQGA-----ALGIPALTAYRALFHRAGAKAGETVLVHGGSGAVGHAAVQLA-RWAG 169

Query: 207 APRIVIVDVDDYRLSVAKEIGADNIVKVSTNLQDIAEEVEKIQKAMGTGIDVSFDCAGLN 266
           A R++          + ++ GAD +       +D+A+ +       G G+DV  +    N
Sbjct: 170 A-RVIATASSAEGAELVRQAGADAVFNYRA--EDLADRILAATA--GQGVDVIIEVLA-N 223

Query: 267 KTMSTALGATCAGGKVCLVGMGHHEMTVPLTPAAVREVDVVGVFRYKNT---WPLCLE-- 321
             ++  L     GG++ + G G    T+P+ P   +E  + GV  Y  T        E  
Sbjct: 224 VNLAKDLDVLAPGGRIVVYGSGGLRGTIPINPLMAKEASIRGVLLYTATPEERAAAAEAI 283

Query: 322 --LLRSGKIDVKPLVTHRFGFSQKEVEEAFETSARGGTAIKV 361
              L  G +  +P++   +     E   A E    GG   KV
Sbjct: 284 AAGLADGAL--RPVIAREYPLE--EAAAAHEAVESGGAIGKV 321

Zeta-crystallin is a eye lens protein with NADP-dependent quinone reductase activity (QOR). It has been cited as a structural component in mammalian eyes, but also has homology to quinone reductases in unrelated species. QOR catalyzes the conversion of a quinone and NAD(P)H to a hydroquinone and NAD(P+. Quinones are cyclic diones derived from aromatic compounds. Membrane bound QOR acts in the respiratory chains of bacteria and mitochondria, while soluble QOR acts to protect from toxic quinones (e.g. DT-diaphorase) or as a soluble eye-lens protein in some vertebrates (e.g. zeta-crystalin). QOR reduces quinones through a semi-quinone intermediate via a NAD(P)H-dependent single electron transfer. QOR is a member of the medium chain dehydrogenase/reductase family, but lacks the zinc-binding sites of the prototypical alcohol dehydrogenases of this group. Alcohol dehydrogenase in the liver converts ethanol and NAD+ to acetaldehyde and NADH, while in yeast and some other microorganisms ADH catalyzes the conversion acetaldehyde to ethanol in alcoholic fermentation. ADH is a member of the medium chain alcohol dehydrogenase family (MDR), which has a NAD(P)(H)-binding domain in a Rossmann fold of a beta-alpha form. The NAD(H)-binding region is comprised of 2 structurally similar halves, each of which contacts a mononucleotide. The N-terminal catalytic domain has a distant homology to GroES. These proteins typically form dimers (typically higher plants, mammals) or tetramers (yeast, bacteria), and have 2 tightly bound zinc atoms per subunit, a catalytic zinc at the active site, and a structural zinc in a lobe of the catalytic domain. NAD(H)-binding occurs in the cleft between the catalytic and coenzyme-binding domains at the active site, and coenzyme binding induces a conformational closing of this cleft. Coenzyme binding typically precedes and contributes to substrate binding. In human ADH catalysis, the zinc ion helps coordinate the alcohol, followed by deprotonation of a histidine, the ribose of NAD, a serine, then the alcohol, which allows the transfer of a hydride to NAD+, creating NADH and a zinc-bound aldehyde or ketone. In yeast and some bacteria, the active site zinc binds an aldehyde, polarizing it, and leading to the reverse reaction. Length = 325

>gnl|CDD|178341 PLN02740, PLN02740, Alcohol dehydrogenase-like

 Score = 96.4 bits (240), Expect = 3e-22
 Identities = 95/351 (27%), Positives = 152/351 (43%), Gaps = 47/351 (13%)

Query: 40  GPYDVLVRMKAVGICGSDVHYLKTLRCADFVVKEPMVIGHECAGVIEKVGSEVKTLVPGD 99
              +V +++    IC +D+   K    A      P ++GHE AG++E VG  V+ L  GD
Sbjct: 34  QKMEVRIKILYTSICHTDLSAWKGENEAQ--RAYPRILGHEAAGIVESVGEGVEDLKAGD 91

Query: 100 RVALEPGISCWRCDHCKGGRYNLCPEM---------------KFFAT----PPVH----G 136
            V       C  C +CK  + NLC                  +F       P  H     
Sbjct: 92  HVIPIFNGECGDCRYCKRDKTNLCETYRVDPFKSVMVNDGKTRFSTKGDGQPIYHFLNTS 151

Query: 137 SLANQVVHPADLCFKLPDNVSLEEGAMCEPLSVGLH-----ACRRANIGPETNVLIMGAG 191
           +     V  +    K+  N  L++  M   LS G+      A   AN+   ++V I G G
Sbjct: 152 TFTEYTVLDSACVVKIDPNAPLKK--MSL-LSCGVSTGVGAAWNTANVQAGSSVAIFGLG 208

Query: 192 PIGLVTMLGAPRAFGAPRIVIVDVDDYRLSVAKEIGADNIVKVSTNLQDIAEEV-EKIQK 250
            +GL    GA RA GA +I+ VD++  +    KE+G  + +    N +D  + V E+I++
Sbjct: 209 AVGLAVAEGA-RARGASKIIGVDINPEKFEKGKEMGITDFI----NPKDSDKPVHERIRE 263

Query: 251 AMGTGIDVSFDCAGLNKTMSTALGATCAG-GKVCLVGMGHHEMTVPLTPAAV---REV-- 304
             G G+D SF+CAG  + +  A  +T  G G   L+G+      +PL P  +   R +  
Sbjct: 264 MTGGGVDYSFECAGNVEVLREAFLSTHDGWGLTVLLGIHPTPKMLPLHPMELFDGRSITG 323

Query: 305 DVVGVFRYKNTWPLCLELLRSGKIDVKPLVTHRFGFSQKEVEEAFETSARG 355
            V G F+ K+  P   +    G +++   +TH   F   ++ EAF+    G
Sbjct: 324 SVFGDFKGKSQLPNLAKQCMQGVVNLDGFITHELPFE--KINEAFQLLEDG 372

Length = 381

>gnl|CDD|132245 TIGR03201, dearomat_had, 6-hydroxycyclohex-1-ene-1-carbonyl-CoA dehydrogenase

 Score = 95.7 bits (238), Expect = 4e-22
 Identities = 82/319 (25%), Positives = 146/319 (45%), Gaps = 25/319 (7%)

Query: 34  FELPSLGPYDVLVRMKAVGICGSDV-HYLKTLRCADFVVKEPMVIGHECAGVIEKVGSEV 92
            E+P LG  DV+V++   G+C +D+ +Y   +R        P+ +GHE +G + + G+  
Sbjct: 16  VEIPELGAGDVVVKVAGCGVCHTDLSYYYMGVRT---NHALPLALGHEISGRVIQAGAGA 72

Query: 93  KTLVPGDRVALEPGISCWRCDHCKGGRYNLCPEMKFFATPPVHGSLANQVVHPAD-LCFK 151
            + + G  V +   I C  C+ CK GR  +C   K      + G  A+ +V PA  LC  
Sbjct: 73  ASWI-GKAVIVPAVIPCGECELCKTGRGTICRAQKMPGN-DMQGGFASHIVVPAKGLC-- 128

Query: 152 LPDNVSLEEGAM--------CEPLSVGLHACRRANIGPETNVLIMGAGPIGLVTMLGAPR 203
           + D   L    +         + ++    A  +A +     V+++GAG +G   M+   +
Sbjct: 129 VVDEARLAAAGLPLEHVSVVADAVTTPYQAAVQAGLKKGDLVIVIGAGGVGGY-MVQTAK 187

Query: 204 AFGAPRIVIVDVDDYRLSVAKEIGADNIVKV-STNLQDIAEEVEKIQKAMG---TGIDVS 259
           A GA  +V +D+D  +L + K  GAD  +     + +++ + ++   KA G   TG  + 
Sbjct: 188 AMGAA-VVAIDIDPEKLEMMKGFGADLTLNPKDKSAREVKKLIKAFAKARGLRSTGWKI- 245

Query: 260 FDCAGLNKTMSTALGATCAGGKVCLVGMGHHEMTVPLTPAAVREVDVVGVFR-YKNTWPL 318
           F+C+G      +AL     GG + +VG    +    L+         +G +    + +P 
Sbjct: 246 FECSGSKPGQESALSLLSHGGTLVVVGYTMAKTEYRLSNLMAFHARALGNWGCPPDRYPA 305

Query: 319 CLELLRSGKIDVKPLVTHR 337
            L+L+  GKI + P V  R
Sbjct: 306 ALDLVLDGKIQLGPFVERR 324

Members of this protein family are 6-hydroxycyclohex-1-ene-1-carbonyl-CoA dehydrogenase, an enzyme in the anaerobic metabolism of aromatic enzymes by way of benzoyl-CoA, as seen in Thauera aromatica, Geobacter metallireducens, and Azoarcus sp. The experimentally characterized form from T. aromatica uses only NAD+, not NADP+. Note that Rhodopseudomonas palustris uses a different pathway to perform a similar degradation of benzoyl-CoA to 3-hydroxpimelyl-CoA. Length = 349

>gnl|CDD|176229 cd08268, MDR2, Medium chain dehydrogenases/reductase (MDR)/zinc-dependent alcohol dehydrogenase-like family

 Score = 93.4 bits (233), Expect = 1e-21
 Identities = 75/285 (26%), Positives = 115/285 (40%), Gaps = 50/285 (17%)

Query: 29  LKIQPFELPSLGPYDVLVRMKAVGICGSDV-----HYLKTLRCADFVVKEPMVIGHECAG 83
           L+I+   +P+ G  +VL+R++A+G+  +D       Y+            P  +G+E AG
Sbjct: 15  LRIEELPVPAPGAGEVLIRVEAIGLNRADAMFRRGAYI-------EPPPLPARLGYEAAG 67

Query: 84  VIEKVGSEVKTLVPGDRVALEPGISCWRCDHCKGGRYNLCPEMKFFATPPVHGSLANQVV 143
           V+E VG+ V     GDRV++ P       D  + G Y                  A   +
Sbjct: 68  VVEAVGAGVTGFAVGDRVSVIP-----AADLGQYGTY------------------AEYAL 104

Query: 144 HPADLCFKLPDNVSLEEGAMC-EPLSV---GLHACRRANIGPETNVLIMGA-GPIGLVTM 198
            PA    KLPD +S  E A            L     A + P  +VLI  A   +GL  +
Sbjct: 105 VPAAAVVKLPDGLSFVEAAALWMQYLTAYGALV--ELAGLRPGDSVLITAASSSVGLAAI 162

Query: 199 LGAPRAFGAPRIVIVDVDDYRLSVAKEIGADNIVKVSTNLQDIAEEVEKIQKAMGTGIDV 258
             A  A GA  I      + R      +GA ++  + T+ +D+  EV +I    G G+DV
Sbjct: 163 QIA-NAAGATVIATTRTSEKR-DALLALGAAHV--IVTDEEDLVAEVLRI--TGGKGVDV 216

Query: 259 SFDCAGLNKTMSTALGATCAGGKVCLVG-MGHHEMTVPLTPAAVR 302
            FD  G     +    A   GG + + G +       PL  A  +
Sbjct: 217 VFDPVG-GPQFAKLADALAPGGTLVVYGALSGEPTPFPLKAALKK 260

This group is a member of the medium chain dehydrogenases/reductase (MDR)/zinc-dependent alcohol dehydrogenase-like family, but lacks the zinc-binding sites of the zinc-dependent alcohol dehydrogenases. The medium chain dehydrogenases/reductase (MDR)/zinc-dependent alcohol dehydrogenase-like family, which contains the zinc-dependent alcohol dehydrogenase (ADH-Zn) and related proteins, is a diverse group of proteins related to the first identified member, class I mammalian ADH. MDRs display a broad range of activities and are distinguished from the smaller short chain dehydrogenases (~ 250 amino acids vs. the ~ 350 amino acids of the MDR). The MDR proteins have 2 domains: a C-terminal NAD(P)-binding Rossmann fold domain of a beta-alpha form and an N-terminal catalytic domain with distant homology to GroES. The MDR group contains a host of activities, including the founding alcohol dehydrogenase (ADH), quinone reductase, sorbitol dehydrogenase, formaldehyde dehydrogenase, butanediol DH, ketose reductase, cinnamyl reductase, and numerous others. The zinc-dependent alcohol dehydrogenases (ADHs) catalyze the NAD(P)(H)-dependent interconversion of alcohols to aldehydes or ketones. Active site zinc has a catalytic role, while structural zinc aids in stability. ADH-like proteins typically form dimers (typically higher plants, mammals) or tetramers (yeast, bacteria), and generally have 2 tightly bound zinc atoms per subunit. The active site zinc is coordinated by a histidine, two cysteines, and a water molecule. The second zinc seems to play a structural role, affects subunit interactions, and is typically coordinated by 4 cysteines. Length = 328

>gnl|CDD|176645 cd05282, ETR_like, 2-enoyl thioester reductase-like

 Score = 88.1 bits (219), Expect = 1e-19
 Identities = 81/353 (22%), Positives = 132/353 (37%), Gaps = 60/353 (16%)

Query: 28  TLKIQPFELPSLGPYDVLVRMKAVGICGSDVHYLKTLRCADFVVKEPMVIGHECAGVIEK 87
            L++    +P  GP +VLVRM A  I  SD+  +            P V G+E  GV+ +
Sbjct: 13  VLELVSLPIPPPGPGEVLVRMLAAPINPSDLITISGA--YGSRPPLPAVPGNEGVGVVVE 70

Query: 88  VGSEVKTLVPGDRVALEPGISCWRCDHCKGGRYNLCPEMKFFATPPVHGSLANQVVHPAD 147
           VGS V  L+ G RV    G   W+                              VV PAD
Sbjct: 71  VGSGVSGLLVGQRVLPLGGEGTWQ----------------------------EYVVAPAD 102

Query: 148 LCFKLPDNVSLEEGAMC--EPLSVGLHACRRANIGPETNVLIMGAGP-IG-LVTMLGAPR 203
               +PD++S E+ AM    PL+  L       + P   V+   A   +G ++  L    
Sbjct: 103 DLIPVPDSISDEQAAMLYINPLTAWLMLTEYLKLPPGDWVIQNAANSAVGRMLIQLAKLL 162

Query: 204 AFGAPRIVIVDVDDYRLSVAKEIGADNIVKVSTNLQDIAEEVEKIQKAMGTGIDVSFDCA 263
            F    I +V  D+    + K +GAD ++  S    D+A+ V++     G G  ++ D  
Sbjct: 163 GFKT--INVVRRDEQVEEL-KALGADEVIDSSPE--DLAQRVKEATG--GAGARLALDAV 215

Query: 264 GLNKTMSTALGATCAGGKVCLV--GMGHHEMTVPLTPAAVREVDVVGVF-------RYKN 314
           G     +T L  +   G   +    +    +  P +    +++ V G +         K 
Sbjct: 216 G--GESATRLARSLRPGGTLVNYGLLSGEPVPFPRSVFIFKDITVRGFWLRQWLHSATKE 273

Query: 315 TWPLCLE----LLRSGKIDVKPLVTHRFGFSQKEVEEAFETSARGGTAIKVMF 363
                      L+ +G +     V  +F     + EEA   + + G   KV+ 
Sbjct: 274 AKQETFAEVIKLVEAGVL--TTPVGAKFPLE--DFEEAVAAAEQPGRGGKVLL 322

2-enoyl thioester reductase (ETR) catalyzes the NADPH-dependent conversion of trans-2-enoyl acyl carrier protein/coenzyme A (ACP/CoA) to acyl-(ACP/CoA) in fatty acid synthesis. 2-enoyl thioester reductase activity has been linked in Candida tropicalis as essential in maintaining mitiochondrial respiratory function. This ETR family is a part of the medium chain dehydrogenase/reductase family, but lack the zinc coordination sites characteristic of the alcohol dehydrogenases in this family. NAD(P)(H)-dependent oxidoreductases are the major enzymes in the interconversion of alcohols and aldehydes, or ketones. Alcohol dehydrogenase in the liver converts ethanol and NAD+ to acetaldehyde and NADH, while in yeast and some other microorganisms ADH catalyzes the conversion acetaldehyde to ethanol in alcoholic fermentation. ADH is a member of the medium chain alcohol dehydrogenase family (MDR), which has a NAD(P)(H)-binding domain in a Rossmann fold of a beta-alpha form. The NAD(H)-binding region is comprised of 2 structurally similar halves, each of which contacts a mononucleotide. The N-terminal catalytic domain has a distant homology to GroES. These proteins typically form dimers (typically higher plants, mammals) or tetramers (yeast, bacteria), and have 2 tightly bound zinc atoms per subunit, a catalytic zinc at the active site and a structural zinc in a lobe of the catalytic domain. NAD(H) binding occurs in the cleft between the catalytic and coenzyme-binding domains at the active site, and coenzyme binding induces a conformational closing of this cleft. Coenzyme binding typically precedes and contributes to substrate binding. Candida tropicalis enoyl thioester reductase (Etr1p) catalyzes the NADPH-dependent reduction of trans-2-enoyl thioesters in mitochondrial fatty acid synthesis. Etr1p forms homodimers with each subunit containing a nucleotide-binding Rossmann fold domain and a catalytic domain. Length = 323

>gnl|CDD|176192 cd08230, glucose_DH, Glucose dehydrogenase

 Score = 88.4 bits (220), Expect = 1e-19
 Identities = 71/280 (25%), Positives = 112/280 (40%), Gaps = 31/280 (11%)

Query: 37  PSLGPYDVLVRMKAVGICGSDVHYLKTLRC-----ADFVVKEPMVIGHECAGVIEKVGSE 91
           P   P +VLVR   VG+CG+D   +           DF     +V+GHE  GV+E+VG  
Sbjct: 21  PEPTPGEVLVRTLEVGVCGTDREIVAGEYGTAPPGEDF-----LVLGHEALGVVEEVGDG 75

Query: 92  VKTLVPGDRVALEPGISCWRCDHCKGGRYNLCPEMKFF--ATPPVHGSLANQVVHPADLC 149
              L PGD V         +C +C+ GR + C   ++       +HG +    V   +  
Sbjct: 76  -SGLSPGDLVVPTVRRPPGKCLNCRIGRPDFCETGEYTERGIKGLHGFMREYFVDDPEYL 134

Query: 150 FKLPDNVSLEEGAMCEPLSV-------GLHACRRANIGPETNVLIMGAGPIGLVT-MLGA 201
            K+P +++ + G + EPLSV            +R         L++GAGPIGL+  +L  
Sbjct: 135 VKVPPSLA-DVGVLLEPLSVVEKAIEQAEAVQKRLPTWNPRRALVLGAGPIGLLAALLLR 193

Query: 202 PRAFGAPRIVIVDVDDYRLSVAKEIGADNIVKVSTNLQDIAEEVEKIQKAMGTGIDVSFD 261
            R F    +   D  D +  + +E+GA  +     N         K+        D+  +
Sbjct: 194 LRGFEVYVLNRRDPPDPKADIVEELGATYV-----NSSKTPVAEVKLVGEF----DLIIE 244

Query: 262 CAGLNKTMSTALGATCAGGKVCLVGMGHHEMTVPLTPAAV 301
             G+      AL A    G V L G+        +    +
Sbjct: 245 ATGVPPLAFEALPALAPNGVVILFGVPGGGREFEVDGGEL 284

Glucose dehydrogenase (GlcDH), a member of the medium chain dehydrogenase/zinc-dependent alcohol dehydrogenase-like family, catalyzes the NADP(+)-dependent oxidation of glucose to gluconate, the first step in the Entner-Doudoroff pathway, an alternative to or substitute for glycolysis or the pentose phosphate pathway. The medium chain dehydrogenases/reductase (MDR)/zinc-dependent alcohol dehydrogenase-like family, which contains the zinc-dependent alcohol dehydrogenase (ADH-Zn) and related proteins, is a diverse group of proteins related to the first identified member, class I mammalian ADH. MDRs display a broad range of activities and are distinguished from the smaller short chain dehydrogenases (~ 250 amino acids vs. the ~ 350 amino acids of the MDR). The MDR proteins have 2 domains: a C-terminal NAD(P) binding-Rossman fold domain of a beta-alpha form and an N-terminal catalytic domain with distant homology to GroES. The MDR group contains a host of activities, including the founding alcohol dehydrogenase (ADH), quinone reductase, sorbitol dehydrogenase, formaldehyde dehydrogenase, butanediol DH, ketose reductase, cinnamyl reductase, and numerous others. The zinc-dependent alcohol dehydrogenases (ADHs) catalyze the NAD(P)(H)-dependent interconversion of alcohols to aldehydes or ketones. Active site zinc has a catalytic role, while structural zinc aids in stability. Length = 355

>gnl|CDD|176228 cd08267, MDR1, Medium chain dehydrogenases/reductase (MDR)/zinc-dependent alcohol dehydrogenase-like family

 Score = 86.9 bits (216), Expect = 3e-19
 Identities = 82/363 (22%), Positives = 127/363 (34%), Gaps = 66/363 (18%)

Query: 19  MAAWLLG---VNTLKIQPFELPSLGPYDVLVRMKAVGICGSDVHYLKTLRCADFVVKEPM 75
           +     G   V  L      +P+  P +VLV++ A  +   D    +           P 
Sbjct: 1   VVYTRYGSPEVLLLLEVEVPIPTPKPGEVLVKVHAASVNPVDWKLRRGPPKLLLGRPFPP 60

Query: 76  VIGHECAGVIEKVGSEVKTLVPGDRVALEPGISCWRCDHCKGGRYNLCPEMKFFATPPVH 135
           + G + AG +  VGS V     GD V                  +   P           
Sbjct: 61  IPGMDFAGEVVAVGSGVTRFKVGDEV------------------FGRLPPKGG------- 95

Query: 136 GSLANQVVHPADLCFKLPDNVSLEEGAMCEPLSVGLHAC----RRANIGPETNVLIMGA- 190
           G+LA  VV P     K P+ VS EE A   P++ GL A         + P   VLI GA 
Sbjct: 96  GALAEYVVAPESGLAKKPEGVSFEEAA-ALPVA-GLTALQALRDAGKVKPGQRVLINGAS 153

Query: 191 GPIG-LVTMLGAPRAFGAPRIVIVD----VDDYRLSVAKEIGADNIVKVSTNLQDIAEEV 245
           G +G     +   +A GA  +  V      +     + + +GAD ++  +T  +D     
Sbjct: 154 GGVGTFAVQIA--KALGA-HVTGVCSTRNAE-----LVRSLGADEVIDYTT--EDFVALT 203

Query: 246 EKIQKAMGTGIDVSFDCAGLNK-TMSTALGATCAGGKVCLVGMGHHEMTVPLTPAAV--- 301
              +K      DV FD  G +  ++  A  A   GG+   VG G   + + L    +   
Sbjct: 204 AGGEK-----YDVIFDAVGNSPFSLYRASLALKPGGRYVSVGGGPSGLLLVLLLLPLTLG 258

Query: 302 ---REVDVVGVFRYKNTWPLCLELLRSGKIDVKPLVTHRFGFSQKEVEEAFETSARGGTA 358
              R +                EL+  GK+  KP++   +     +  EA+     G   
Sbjct: 259 GGGRRLKFFLAKPNAEDLEQLAELVEEGKL--KPVIDSVYPLE--DAPEAYRRLKSGRAR 314

Query: 359 IKV 361
            KV
Sbjct: 315 GKV 317

This group is a member of the medium chain dehydrogenases/reductase (MDR)/zinc-dependent alcohol dehydrogenase-like family, but lacks the zinc-binding sites of the zinc-dependent alcohol dehydrogenases. The medium chain dehydrogenases/reductase (MDR)/zinc-dependent alcohol dehydrogenase-like family, which contains the zinc-dependent alcohol dehydrogenase (ADH-Zn) and related proteins, is a diverse group of proteins related to the first identified member, class I mammalian ADH. MDRs display a broad range of activities and are distinguished from the smaller short chain dehydrogenases (~ 250 amino acids vs. the ~ 350 amino acids of the MDR). The MDR proteins have 2 domains: a C-terminal NAD(P)-binding Rossmann fold domain of a beta-alpha form and an N-terminal catalytic domain with distant homology to GroES. The MDR group contains a host of activities, including the founding alcohol dehydrogenase (ADH), quinone reductase, sorbitol dehydrogenase, formaldehyde dehydrogenase, butanediol DH, ketose reductase, cinnamyl reductase, and numerous others. The zinc-dependent alcohol dehydrogenases (ADHs) catalyze the NAD(P)(H)-dependent interconversion of alcohols to aldehydes or ketones. Active site zinc has a catalytic role, while structural zinc aids in stability. ADH-like proteins typically form dimers (typically higher plants, mammals) or tetramers (yeast, bacteria), and generally have 2 tightly bound zinc atoms per subunit. The active site zinc is coordinated by a histidine, two cysteines, and a water molecule. The second zinc seems to play a structural role, affects subunit interactions, and is typically coordinated by 4 cysteines. Length = 319

>gnl|CDD|166227 PLN02586, PLN02586, probable cinnamyl alcohol dehydrogenase

 Score = 83.8 bits (207), Expect = 6e-18
 Identities = 76/272 (27%), Positives = 124/272 (45%), Gaps = 30/272 (11%)

Query: 40  GPYDVLVRMKAVGICGSDVHYLKTLRCADF-VVKEPMVIGHECAGVIEKVGSEVKTLVPG 98
           G  DV V++   G+C SD+H +K     ++   + P+V GHE  G++ K+G  VK    G
Sbjct: 36  GDEDVTVKILYCGVCHSDLHTIKN----EWGFTRYPIVPGHEIVGIVTKLGKNVKKFKEG 91

Query: 99  DRVALEPGI---SCWRCDHCKGGRYNLCPEMKFFATPPVH------GSLANQVVHPADLC 149
           DRV +  G+   SC  C+ C     N CP+M F      H      G  ++ +V      
Sbjct: 92  DRVGV--GVIVGSCKSCESCDQDLENYCPKMIFTYNSIGHDGTKNYGGYSDMIVVDQHFV 149

Query: 150 FKLPDNVSLEEGA--MCEPLSVGLHACRRANIGPETNVLIMGAGPIGLVTM-LGAPRAFG 206
            + PDN+ L+ GA  +C  ++V           P  ++ + G G +G V + +G  +AFG
Sbjct: 150 LRFPDNLPLDAGAPLLCAGITVYSPMKYYGMTEPGKHLGVAGLGGLGHVAVKIG--KAFG 207

Query: 207 APRIVIVDVDDYRLSVAKEIGADNIVKVSTNLQDIAEEVEKIQKAMGTGIDVSFDCAGLN 266
               VI    +        +GAD+ + VST+        EK++ A+GT +D   D     
Sbjct: 208 LKVTVISSSSNKEDEAINRLGADSFL-VSTD-------PEKMKAAIGT-MDYIIDTVSAV 258

Query: 267 KTMSTALGATCAGGKVCLVGMGHHEMTVPLTP 298
             +   LG     GK+  +G+    + +P+ P
Sbjct: 259 HALGPLLGLLKVNGKLITLGLPEKPLELPIFP 290

Length = 360

>gnl|CDD|176256 cd08296, CAD_like, Cinnamyl alcohol dehydrogenases (CAD)

 Score = 83.1 bits (206), Expect = 8e-18
 Identities = 70/258 (27%), Positives = 118/258 (45%), Gaps = 21/258 (8%)

Query: 34  FELPSLGPYDVLVRMKAVGICGSDVHYLKTLRCADFVVKEPMVIGHECAGVIEKVGSEVK 93
            ++P  GP +VL++++A G+C SD         A   +  P V GHE  G I+ VG  V 
Sbjct: 18  RDVPLPGPGEVLIKVEACGVCHSDAF---VKEGAMPGLSYPRVPGHEVVGRIDAVGEGVS 74

Query: 94  TLVPGDRVALE-PGISCWRCDHCKGGRYNLCPEMKFFATPPVH--GSLANQVVHPADLCF 150
               GDRV +   G  C  CD C+ G +  C   K      V   G  A  ++ PA+   
Sbjct: 75  RWKVGDRVGVGWHGGHCGTCDACRRGDFVHCENGKV---TGVTRDGGYAEYMLAPAEALA 131

Query: 151 KLPDNVSLEEGA--MCEPLSVGLHACRRANIGPETNVLIMGAGPIGLVTMLGAPRAFGAP 208
           ++PD++   E A  +C  ++   +A R +   P   V + G G +G + +  A    G  
Sbjct: 132 RIPDDLDAAEAAPLLCAGVTT-FNALRNSGAKPGDLVAVQGIGGLGHLAVQYA-AKMGF- 188

Query: 209 RIVIVDVDDYRLSVAKEIGADNIVKVSTNLQDIAEEVEKIQKAMGTGIDVSFDCAGLNKT 268
           R V +     +  +A+++GA     + T+ +D+AE +    + +G G  +    A   K 
Sbjct: 189 RTVAISRGSDKADLARKLGAH--HYIDTSKEDVAEAL----QELG-GAKLILATAPNAKA 241

Query: 269 MSTALGATCAGGKVCLVG 286
           +S  +G     GK+ ++G
Sbjct: 242 ISALVGGLAPRGKLLILG 259

Cinnamyl alcohol dehydrogenases (CAD), members of the medium chain dehydrogenase/reductase family, reduce cinnamaldehydes to cinnamyl alcohols in the last step of monolignal metabolism in plant cells walls. CAD binds 2 zinc ions and is NADPH- dependent. CAD family members are also found in non-plant species, e.g. in yeast where they have an aldehyde reductase activity. The medium chain dehydrogenases/reductase (MDR)/zinc-dependent alcohol dehydrogenase-like family, which contains the zinc-dependent alcohol dehydrogenase (ADH-Zn) and related proteins, is a diverse group of proteins related to the first identified member, class I mammalian ADH. MDRs display a broad range of activities and are distinguished from the smaller short chain dehydrogenases (~ 250 amino acids vs. the ~ 350 amino acids of the MDR). The MDR proteins have 2 domains: a C-terminal NAD(P) binding-Rossmann fold domain of a beta-alpha form and an N-terminal catalytic domain with distant homology to GroES. The MDR group contains a host of activities, including the founding alcohol dehydrogenase (ADHs), quinone reductase, sorbitol dehydrogenase, formaldehyde dehydrogenase, butanediol DH, ketose reductase, cinnamyl reductase, and numerous others. The zinc-dependent alcohol dehydrogenases (ADHs) catalyze the NAD(P)(H)-dependent interconversion of alcohols to aldehydes or ketones. Active site zinc has a catalytic role, while structural zinc aids in stability. ADH-like proteins typically form dimers (typically higher plants, mammals) or tetramers (yeast, bacteria), and generally have 2 tightly bound zinc atoms per subunit. The active site zinc is coordinated by a histidine, two cysteines, and a water molecule. The second zinc seems to play a structural role, affects subunit interactions, and is typically coordinated by 4 cysteines. Length = 333

>gnl|CDD|215442 PLN02827, PLN02827, Alcohol dehydrogenase-like

 Score = 82.6 bits (204), Expect = 1e-17
 Identities = 89/369 (24%), Positives = 153/369 (41%), Gaps = 63/369 (17%)

Query: 21  AWLLGVNTLKIQPFELPSLGPYDVLVRMKAVGICGSDVHYLKTLRCADFVVKEPMVIGHE 80
           AW  G   L ++  E+    P ++ +++ +  +C SD+   ++   A F    P + GHE
Sbjct: 18  AWGAG-EALVMEEVEVSPPQPLEIRIKVVSTSLCRSDLSAWESQ--ALF----PRIFGHE 70

Query: 81  CAGVIEKVGSEVKTLVPGDRVALEPGISCWRCDHCKGGRYNLCPEM-------------- 126
            +G++E +G  V     GD V       C  C HC  G+ N+C  +              
Sbjct: 71  ASGIVESIGEGVTEFEKGDHVLTVFTGECGSCRHCISGKSNMCQVLGLERKGVMHSDQKT 130

Query: 127 --KFFATPPVH----GSLANQVVHPADLCFKLPDNVSLEEGAMCE-PLSVGLHAC-RRAN 178
                  P  H     S +   V  +    K+     L +  +    ++ GL A    A+
Sbjct: 131 RFSIKGKPVYHYCAVSSFSEYTVVHSGCAVKVDPLAPLHKICLLSCGVAAGLGAAWNVAD 190

Query: 179 IGPETNVLIMGAGPIGLVTMLGAPRAFGAPRIVIVDVDDYRLSVAKEIGADNIVKVSTNL 238
           +   ++V+I G G +GL    GA +  GA +I+ VD++  +   AK  G  + +    N 
Sbjct: 191 VSKGSSVVIFGLGTVGLSVAQGA-KLRGASQIIGVDINPEKAEKAKTFGVTDFI----NP 245

Query: 239 QDIAEEVEKIQKAM-GTGIDVSFDCAGLNKTMSTALGATCAGGKVCLVGMGHHEMTVPL- 296
            D++E ++++ K M G G D SF+C G     +TAL +   G            +TV L 
Sbjct: 246 NDLSEPIQQVIKRMTGGGADYSFECVGDTGIATTALQSCSDGWG----------LTVTLG 295

Query: 297 TPAAVREVD---------------VVGVFRYKNTWPLCLELLRSGKIDVKPLVTHRFGFS 341
            P A  EV                + G ++ K+  P  ++   + +I +   +TH   F 
Sbjct: 296 VPKAKPEVSAHYGLFLSGRTLKGSLFGGWKPKSDLPSLVDKYMNKEIMIDEFITHNLSFD 355

Query: 342 QKEVEEAFE 350
             E+ +AFE
Sbjct: 356 --EINKAFE 362

Length = 378

>gnl|CDD|176180 cd05276, p53_inducible_oxidoreductase, PIG3 p53-inducible quinone oxidoreductase

 Score = 80.6 bits (200), Expect = 5e-17
 Identities = 75/281 (26%), Positives = 115/281 (40%), Gaps = 70/281 (24%)

Query: 25  GVNTLKIQPFELPSLGPYDVLVRMKAVGICGSDV-----HYLKTLRCADFVVKEPM---- 75
           G   L++     P+ GP +VL+R+ A G+  +D+      Y             P     
Sbjct: 11  GPEVLELGEVPKPAPGPGEVLIRVAAAGVNRADLLQRQGLY-------------PPPPGA 57

Query: 76  --VIGHECAGVIEKVGSEVKTLVPGDRV-ALEPGISCWRCDHCKGGRYNLCPEMKFFATP 132
             ++G E AGV+  VG  V     GDRV AL  G          GG Y            
Sbjct: 58  SDILGLEVAGVVVAVGPGVTGWKVGDRVCALLAG----------GG-Y------------ 94

Query: 133 PVHGSLANQVVHPADLCFKLPDNVSLEEGA-MCEP-LSVGLHACRRANIGPETNVLIM-G 189
                 A  VV PA     +P+ +SL E A + E   +   +  +   +     VLI  G
Sbjct: 95  ------AEYVVVPAGQLLPVPEGLSLVEAAALPEVFFTAWQNLFQLGGLKAGETVLIHGG 148

Query: 190 AGPIGLVTMLGAPRAFGAPRIVIVDVDDYRLSVAKEIGADNIVKVSTNLQDIAEEVEKIQ 249
           A  +G   +  A +A GA  I     ++ +L   + +GAD  V ++   +D AEEV++  
Sbjct: 149 ASGVGTAAIQLA-KALGARVIATAGSEE-KLEACRALGAD--VAINYRTEDFAEEVKEAT 204

Query: 250 KAMGTGIDVSFDCAG---LNKTMSTALGATCAGGKVCLVGM 287
              G G+DV  D  G   L + +  AL      G++ L+G+
Sbjct: 205 G--GRGVDVILDMVGGDYLARNLR-ALA---PDGRLVLIGL 239

PIG3 p53-inducible quinone oxidoreductase, a medium chain dehydrogenase/reductase family member, acts in the apoptotic pathway. PIG3 reduces ortho-quinones, but its apoptotic activity has been attributed to oxidative stress generation, since overexpression of PIG3 accumulates reactive oxygen species. PIG3 resembles the MDR family member quinone reductases, which catalyze the reduction of quinone to hydroxyquinone. NAD(P)(H)-dependent oxidoreductases are the major enzymes in the interconversion of alcohols and aldehydes or ketones. Alcohol dehydrogenase in the liver converts ethanol and NAD+ to acetaldehyde and NADH, while in yeast and some other microorganisms ADH catalyzes the conversion acetaldehyde to ethanol in alcoholic fermentation. ADH is a member of the medium chain alcohol dehydrogenase family (MDR), which has a NAD(P)(H)-binding domain in a Rossmann fold of a beta-alpha form. The NAD(H)-binding region is comprised of 2 structurally similar halves, each of which contacts a mononucleotide. A GxGxxG motif after the first mononucleotide contact half allows the close contact of the coenzyme with the ADH backbone. The N-terminal catalytic domain has a distant homology to GroES. These proteins typically form dimers (typically higher plants, mammals) or tetramers (yeast, bacteria), and have 2 tightly bound zinc atoms per subunit, a catalytic zinc at the active site, and a structural zinc in a lobe of the catalytic domain. NAD(H) binding occurs in the cleft between the catalytic and coenzyme-binding domains at the active site, and coenzyme binding induces a conformational closing of this cleft. Coenzyme binding typically precedes and contributes to substrate binding. In human ADH catalysis, the zinc ion helps coordinate the alcohol, followed by deprotonation of a histidine, the ribose of NAD, a serine, then the alcohol, which allows the transfer of a hydride to NAD+, creating NADH and a zinc-bound aldehyde or ketone. In yeast and some bacteria, the active site zinc binds an aldehyde, polarizing it, and leading to the reverse reaction. Length = 323

>gnl|CDD|234025 TIGR02819, fdhA_non_GSH, formaldehyde dehydrogenase, glutathione-independent

 Score = 81.1 bits (200), Expect = 6e-17
 Identities = 76/271 (28%), Positives = 125/271 (46%), Gaps = 34/271 (12%)

Query: 18  NMAAWLLGVNTLKIQPFELPSLGPYD-------VLVRMKAVGICGSDVHYLKTLRCADFV 70
           N     LG   +++Q  + P L   D       V++++    ICGSD H ++    A   
Sbjct: 3   NRGVVYLGPGKVEVQDIDYPKLELPDGRKCEHGVILKVVTTNICGSDQHMVRGRTTA--- 59

Query: 71  VKEPMVIGHECAGVIEKVGSEVKTLVPGDRVALEPGISCWRCDHCKGGRYNLC----PEM 126
               +V+GHE  G + + G +V+ +  GD V++   I+C RC +CK G   +C    P  
Sbjct: 60  -PTGLVLGHEITGEVIEKGRDVEFIKIGDIVSVPFNIACGRCRNCKEGHTGVCLNVNPAR 118

Query: 127 KFFATPPVH-----GSLANQVVHP-ADL-CFKLPD-NVSLEE----GAMCEPLSVGLHAC 174
              A   V      G  +  V+ P AD    K PD + +LE+      + +    G H  
Sbjct: 119 AGAAYGYVDMGGWVGGQSEYVMVPYADFNLLKFPDRDQALEKIRDLTMLSDIFPTGYHGA 178

Query: 175 RRANIGPETNVLIMGAGPIGLVTMLGAPRAFGAPRIVIVDVDDYRLSVAKEIGADNIVKV 234
             A +GP + V I GAGP+GL     A +  GA  +++ D++  RL+ A+  G + +   
Sbjct: 179 VTAGVGPGSTVYIAGAGPVGLAAAASA-QLLGAAVVIVGDLNPARLAQARSFGCETV--- 234

Query: 235 STNLQDIAEEVEKIQKAMGT-GIDVSFDCAG 264
             +L   A   E+I++ +G   +D + DC G
Sbjct: 235 --DLSKDATLPEQIEQILGEPEVDCAVDCVG 263

Members of this family represent a distinct clade within the larger family of zinc-dependent dehydrogenases of medium chain alcohols, a family that also includes the so-called glutathione-dependent formaldehyde dehydrogenase. Members of this protein family have a tightly bound NAD that can act as a true cofactor, rather than a cosubstrate in dehydrogenase reactions, in dismutase reactions for some aldehydes. The name given to this family, however, is formaldehyde dehydrogenase, glutathione-independent [Central intermediary metabolism, One-carbon metabolism]. Length = 393

>gnl|CDD|176200 cd08238, sorbose_phosphate_red, L-sorbose-1-phosphate reductase

 Score = 79.8 bits (197), Expect = 1e-16
 Identities = 62/233 (26%), Positives = 100/233 (42%), Gaps = 41/233 (17%)

Query: 20  AAWLLGVNTLKIQPFELPSLGPYDVLVRMKAVGICGSDVHYLKT----LRCADFVVKEPM 75
           A  + G   L+++ FELP +   ++LVR+ +  +C S            +  + + KEP+
Sbjct: 5   AWRMYGKGDLRLEKFELPEIADDEILVRVISDSLCFSTWKLALQGSDHKKVPNDLAKEPV 64

Query: 76  VIGHECAGVIEKVGSEVK-TLVPGDRVALEPGISCWRCDHCKGGRYNLCPEMKFFATPPV 134
           ++GHE AG I KVG + +    PG R  ++P +       C G  Y              
Sbjct: 65  ILGHEFAGTILKVGKKWQGKYKPGQRFVIQPALILPDGPSCPGYSYTYP----------- 113

Query: 135 HGSLANQVVHPADL----CFKLPDNVSLEEGAMCEPLS--VG-LHACRRANIG------- 180
            G LA   + P ++    C  + +     E ++ EPLS  +G   A      G       
Sbjct: 114 -GGLATYHIIPNEVMEQDCLLIYEGDGYAEASLVEPLSCVIGAYTANYHLQPGEYRHRMG 172

Query: 181 --PETNVLIMG-AGPIGLVTMLGAPRAFGAP----RIVIVDVDDYRLSVAKEI 226
             P  N  I+G AGP+GL   +    A   P     +V+ DV+D RL+ A+ +
Sbjct: 173 IKPGGNTAILGGAGPMGL---MAIDYAIHGPIGPSLLVVTDVNDERLARAQRL 222

L-sorbose-1-phosphate reductase, a member of the MDR family, catalyzes the NADPH-dependent conversion of l-sorbose 1-phosphate to d-glucitol 6-phosphate in the metabolism of L-sorbose to (also converts d-fructose 1-phosphate to d-mannitol 6-phosphate). The medium chain dehydrogenases/reductase (MDR)/zinc-dependent alcohol dehydrogenase-like family, which contains the zinc-dependent alcohol dehydrogenase (ADH-Zn) and related proteins, is a diverse group of proteins related to the first identified member, class I mammalian ADH. MDRs display a broad range of activities and are distinguished from the smaller short chain dehydrogenases (~ 250 amino acids vs. the ~ 350 amino acids of the MDR). The MDR proteins have 2 domains: a C-terminal NAD(P) binding-Rossmann fold domain of an beta-alpha form and an N-terminal catalytic domain with distant homology to GroES. The MDR group contains a host of activities, including the founding alcohol dehydrogenase (ADH), quinone reductase, sorbitol dehydrogenase, formaldehyde dehydrogenase, butanediol DH, ketose reductase, cinnamyl reductase, and numerous others. The zinc-dependent alcohol dehydrogenases (ADHs) catalyze the NAD(P)(H)-dependent interconversion of alcohols to aldehydes or ketones. Active site zinc has a catalytic role, while structural zinc aids in stability. Length = 410

>gnl|CDD|176236 cd08275, MDR3, Medium chain dehydrogenases/reductase (MDR)/zinc-dependent alcohol dehydrogenase-like family

 Score = 78.8 bits (195), Expect = 2e-16
 Identities = 75/269 (27%), Positives = 102/269 (37%), Gaps = 80/269 (29%)

Query: 21  AWLL----GVNTLKIQPFELPSLGPYDVLVRMKAVGICGSDV-----HYLKTLRCADFVV 71
           A +L    G++ LK++   LP     +V VR++A G+  +D+      Y           
Sbjct: 2   AVVLTGFGGLDKLKVEKEALPEPSSGEVRVRVEACGLNFADLMARQGLYDSA-------P 54

Query: 72  KEPMVIGHECAGVIEKVGSEVKTLVPGDRVALEPGISCWRCDHCKGGRYNLCPEMKFFAT 131
           K P V G ECAG +E VG  VK    GDRV     +   R                    
Sbjct: 55  KPPFVPGFECAGTVEAVGEGVKDFKVGDRV-----MGLTRF------------------- 90

Query: 132 PPVHGSLANQVVHPADLCFKLPDNVSLEEGAMCEPLSVGLHA----CRRANIGPETNVLI 187
               G  A  V  PAD  F LPD +S EE A        L A        N+ P  +VL+
Sbjct: 91  ----GGYAEVVNVPADQVFPLPDGMSFEEAAAF--PVNYLTAYYALFELGNLRPGQSVLV 144

Query: 188 -MGAGPIGL-----------VTMLGAPRAFGAPRIVIVDVDDYRLSVAKEIGADNIVKVS 235
              AG +GL           VT++G   A              +    KE G  +++   
Sbjct: 145 HSAAGGVGLAAGQLCKTVPNVTVVGTASAS-------------KHEALKENGVTHVIDYR 191

Query: 236 TNLQDIAEEVEKIQKAMGTGIDVSFDCAG 264
           T  QD  EEV+KI      G+D+  D  G
Sbjct: 192 T--QDYVEEVKKIS---PEGVDIVLDALG 215

This group is a member of the medium chain dehydrogenases/reductase (MDR)/zinc-dependent alcohol dehydrogenase-like family, but lacks the zinc-binding sites of the zinc-dependent alcohol dehydrogenases. The medium chain dehydrogenases/reductase (MDR)/zinc-dependent alcohol dehydrogenase-like family, which contains the zinc-dependent alcohol dehydrogenase (ADH-Zn) and related proteins, is a diverse group of proteins related to the first identified member, class I mammalian ADH. MDRs display a broad range of activities and are distinguished from the smaller short chain dehydrogenases (~ 250 amino acids vs. the ~ 350 amino acids of the MDR). The MDR proteins have 2 domains: a C-terminal NAD(P)-binding Rossmann fold domain of a beta-alpha form and an N-terminal catalytic domain with distant homology to GroES. The MDR group contains a host of activities, including the founding alcohol dehydrogenase (ADH), quinone reductase, sorbitol dehydrogenase, formaldehyde dehydrogenase, butanediol DH, ketose reductase, cinnamyl reductase, and numerous others. The zinc-dependent alcohol dehydrogenases (ADHs) catalyze the NAD(P)(H)-dependent interconversion of alcohols to aldehydes or ketones. Active site zinc has a catalytic role, while structural zinc aids in stability. ADH-like proteins typically form dimers (typically higher plants, mammals) or tetramers (yeast, bacteria), and generally have 2 tightly bound zinc atoms per subunit. The active site zinc is coordinated by a histidine, two cysteines, and a water molecule. The second zinc seems to play a structural role, affects subunit interactions, and is typically coordinated by 4 cysteines. Length = 337

>gnl|CDD|176179 cd05195, enoyl_red, enoyl reductase of polyketide synthase

 Score = 77.2 bits (191), Expect = 5e-16
 Identities = 45/167 (26%), Positives = 66/167 (39%), Gaps = 42/167 (25%)

Query: 43  DVLVRMKAVGICGSDVHYLKTLRCADFVVKEPMVIGHECAGVIEKVGSEVKTLVPGDRVA 102
           +V V +KA G+   DV     L     +  +   +G EC+G++ +VGS V  L  GDRV 
Sbjct: 2   EVEVEVKAAGLNFRDV-----LVALGLLPGDETPLGLECSGIVTRVGSGVTGLKVGDRVM 56

Query: 103 LEPGISCWRCDHCKGGRYNLCPEMKFFATPPVHGSLANQVVHPADLCFKLPDNVSLEEGA 162
              G++                           G+ A  V   A L  K+PD++S EE A
Sbjct: 57  ---GLA--------------------------PGAFATHVRVDARLVVKIPDSLSFEEAA 87

Query: 163 -MCEPLSVGLHA-CRRANIGPETNVLIM-GAGPIGLVT-----MLGA 201
            +        +A    A +    +VLI   AG +G         LGA
Sbjct: 88  TLPVAYLTAYYALVDLARLQKGESVLIHAAAGGVGQAAIQLAQHLGA 134

Putative enoyl reductase of polyketide synthase. Polyketide synthases produce polyketides in step by step mechanism that is similar to fatty acid synthesis. Enoyl reductase reduces a double to single bond. Erythromycin is one example of a polyketide generated by 3 complex enzymes (megasynthases). 2-enoyl thioester reductase (ETR) catalyzes the NADPH-dependent dependent conversion of trans-2-enoyl acyl carrier protein/coenzyme A (ACP/CoA) to acyl-(ACP/CoA) in fatty acid synthesis. 2-enoyl thioester reductase activity has been linked in Candida tropicalis as essential in maintaining mitiochondrial respiratory function. This ETR family is a part of the medium chain dehydrogenase/reductase family, but lack the zinc coordination sites characteristic of the alcohol dehydrogenases in this family. NAD(P)(H)-dependent oxidoreductases are the major enzymes in the interconversion of alcohols and aldehydes or ketones. Alcohol dehydrogenase in the liver converts ethanol and NAD+ to acetaldehyde and NADH, while in yeast and some other microorganisms ADH catalyzes the conversion acetaldehyde to ethanol in alcoholic fermentation. ADH is a member of the medium chain alcohol dehydrogenase family (MDR), which has a NAD(P)(H)-binding domain in a Rossmann fold of a beta-alpha form. The NAD(H)-binding region is comprised of 2 structurally similar halves, each of which contacts a mononucleotide. The N-terminal catalytic domain has a distant homology to GroES. These proteins typically form dimers (typically higher plants, mammals) or tetramers (yeast, bacteria), and have 2 tightly bound zinc atoms per subunit, a catalytic zinc at the active site, and a structural zinc in a lobe of the catalytic domain. NAD(H) binding occurs in the cleft between the catalytic and coenzyme-binding domains, at the active site, and coenzyme binding induces a conformational closing of this cleft. Coenzyme binding typically precedes and contributes to substrate binding. Length = 293

>gnl|CDD|132409 TIGR03366, HpnZ_proposed, putative phosphonate catabolism associated alcohol dehydrogenase

 Score = 72.9 bits (179), Expect = 1e-14
 Identities = 67/254 (26%), Positives = 100/254 (39%), Gaps = 25/254 (9%)

Query: 76  VIGHECAGVIEKVGSEV------KTLVPGDRVALEPGISCWRCDHCKGGRYNLCPEMK-- 127
           V+GHE  G +  +            L  G RV     + C RC  C+ G    C  ++  
Sbjct: 1   VLGHEIVGEVVALRGGFTPADDGVPLRLGQRVVWSVTVPCGRCFRCRRGLPQKCDSLRKY 60

Query: 128 ----FFATPPVHGSLANQVVHPADL-CFKLPDNV--SLEEGAMCEPLSVGLHACRRANIG 180
                 +  P+ G  A     PA      +PD++  ++   A C   +V + A   A   
Sbjct: 61  GHEALDSGWPLSGGYAEHCHLPAGTAIVPVPDDLPDAVAAPAGCATATV-MAALEAAGDL 119

Query: 181 PETNVLIMGAGPIGLVTMLGAPRAFGAPRIVIVDVDDYRLSVAKEIGADNIVKVSTNLQD 240
               VL++GAG +GL T   A  A GA R+V  D    R  +A   GA  + +       
Sbjct: 120 KGRRVLVVGAGMLGL-TAAAAAAAAGAARVVAADPSPDRRELALSFGATALAEPEV---- 174

Query: 241 IAEEVEKIQKAMGTGIDVSFDCAGLNKTMSTALGATCAGGKVCLVGMGHHEMTVPLTPAA 300
           +AE    +Q   G G+DV+ + +G    +   L +   GG   L G       V L P  
Sbjct: 175 LAERQGGLQN--GRGVDVALEFSGATAAVRACLESLDVGGTAVLAGSVFPGGPVALDPEQ 232

Query: 301 V--REVDVVGVFRY 312
           V  R + + GV  Y
Sbjct: 233 VVRRWLTIRGVHNY 246

This clade of zinc-binding alcohol dehydrogenases (members of pfam00107) are repeatedly associated with genes proposed to be involved with the catabolism of phosphonate compounds. Length = 280

>gnl|CDD|234027 TIGR02824, quinone_pig3, putative NAD(P)H quinone oxidoreductase, PIG3 family

 Score = 72.7 bits (179), Expect = 2e-14
 Identities = 84/369 (22%), Positives = 134/369 (36%), Gaps = 96/369 (26%)

Query: 29  LKIQPFELPSLGPYDVLVRMKAVGICGSDV-----HYLKTLRCADFVVKEPM------VI 77
           L +    LP     +VL+R+ A G+   D+      Y             P       ++
Sbjct: 15  LVLVEVPLPVPKAGEVLIRVAAAGVNRPDLLQRAGKY-------------PPPPGASDIL 61

Query: 78  GHECAGVIEKVGSEVKTLVPGDRVALEPGISCWRCDHCKGGRYNLCPEMKFFATPPVHGS 137
           G E AG +  VG  V     GDRV          C    GG Y                 
Sbjct: 62  GLEVAGEVVAVGEGVSRWKVGDRV----------CALVAGGGY----------------- 94

Query: 138 LANQVVHPADLCFKLPDNVSLEEGAMCEP---LSVGLHACRRANIGPETNVLIM-GAGPI 193
            A  V  PA     +P+ +SL E A   P    +V  +  +R  +     VLI  GA  I
Sbjct: 95  -AEYVAVPAGQVLPVPEGLSLVEAAAL-PETFFTVWSNLFQRGGLKAGETVLIHGGASGI 152

Query: 194 GLVTMLGAPRAFGAPRIVIVDVDDYRLSVAKEIGADNIVKVSTNLQDIAEEVEKIQKAMG 253
           G   +  A +AFGA        D+ + +  + +GAD  + ++   +D  E V+   +  G
Sbjct: 153 GTTAIQLA-KAFGARVFTTAGSDE-KCAACEALGAD--IAINYREEDFVEVVK--AETGG 206

Query: 254 TGIDVSFDCAG---LNKTMSTALGATCAGGKVCLVG-MGHHEMTVPLTPAAVREVDVVGV 309
            G+DV  D  G   LN+ +     A    G++  +G  G  +  + L P   + + + G 
Sbjct: 207 KGVDVILDIVGGSYLNRNIK----ALALDGRIVQIGFQGGRKAELDLGPLLAKRLTITGS 262

Query: 310 ----------------FRYKNTWPLCLELLRSGKIDVKPLVTHRFGFSQKEVEEAFETSA 353
                            R ++ WP    LL SG++  +P++   F        +A     
Sbjct: 263 TLRARPVAEKAAIAAELR-EHVWP----LLASGRV--RPVIDKVFPLED--AAQAHALME 313

Query: 354 RGGTAIKVM 362
            G    K++
Sbjct: 314 SGDHIGKIV 322

Members of this family are putative quinone oxidoreductases that belong to the broader superfamily (modeled by Pfam pfam00107) of zinc-dependent alcohol (of medium chain length) dehydrogenases and quinone oxiooreductases. The alignment shows no motif of conserved Cys residues as are found in zinc-binding members of the superfamily, and members are likely to be quinone oxidoreductases instead. A member of this family in Homo sapiens, PIG3, is induced by p53 but is otherwise uncharacterized [Unknown function, Enzymes of unknown specificity]. Length = 325

>gnl|CDD|176210 cd08248, RTN4I1, Human Reticulon 4 Interacting Protein 1

 Score = 71.5 bits (176), Expect = 7e-14
 Identities = 89/379 (23%), Positives = 128/379 (33%), Gaps = 116/379 (30%)

Query: 41  PYDVLVRMKAVGICGSDV--------HYLKTLRCADFVVKE----PMVIGHECAGVIEKV 88
           P  VL+++ A  +   DV          L   R            P+ +G +C+GV+  +
Sbjct: 29  PNQVLIKVHAASVNPIDVLMRSGYGRTLLNKKRKPQSCKYSGIEFPLTLGRDCSGVVVDI 88

Query: 89  GSEVKTLVPGDRVALEPGISCWRCDHCKGGRYNLCPEMKFFATPPVH-GSLANQVVHPAD 147
           GS VK+   GD V                            A PP   G+ A  VV P +
Sbjct: 89  GSGVKSFEIGDEVWG--------------------------AVPPWSQGTHAEYVVVPEN 122

Query: 148 LCFKLPDNVSLEEGAMCEPLSVGLHAC-------RRANIGPET----NVLIMGA-GPIG- 194
              K P N+S EE A     S+                + P+      VLI+G  G +G 
Sbjct: 123 EVSKKPKNLSHEEAA-----SLPYAGLTAWSALVNVGGLNPKNAAGKRVLILGGSGGVGT 177

Query: 195 -LVTMLGAPRAFGAPRIVIVDVDDYRLSVAKEIGADNIVKVSTNLQDIAEEVEKIQKAMG 253
             + +L   +A+GA   V        + + K +GAD+++       D   E  + +    
Sbjct: 178 FAIQLL---KAWGA--HVTTTCSTDAIPLVKSLGADDVI-------DYNNEDFEEELTER 225

Query: 254 TGIDVSFDCAGLNK----------------TMSTALGATCAGGKVCLVGMGHHEMTVPLT 297
              DV  D  G +                  +S  L  T   G V   GM        L 
Sbjct: 226 GKFDVILDTVGGDTEKWALKLLKKGGTYVTLVSPLLKNTDKLGLV--GGM--------LK 275

Query: 298 PAAVREVDVVGVFRYKNT--W------PLCL----ELLRSGKIDVKPLVTHRFGFSQKEV 345
            A       V      +   W         L    +L+  GKI  KP++   F F   EV
Sbjct: 276 SAVDLLKKNVKSLLKGSHYRWGFFSPSGSALDELAKLVEDGKI--KPVIDKVFPFE--EV 331

Query: 346 EEAFE----TSARGGTAIK 360
            EA+E      ARG T IK
Sbjct: 332 PEAYEKVESGHARGKTVIK 350

Human Reticulon 4 Interacting Protein 1 is a member of the medium chain dehydrogenase/ reductase (MDR) family. Riticulons are endoplasmic reticulum associated proteins involved in membrane trafficking and neuroendocrine secretion. The MDR/zinc-dependent alcohol dehydrogenase-like family, which contains the zinc-dependent alcohol dehydrogenase (ADH-Zn) and related proteins, is a diverse group of proteins related to the first identified member, class I mammalian ADH. MDRs display a broad range of activities and are distinguished from the smaller short chain dehydrogenases (~ 250 amino acids vs. the ~ 350 amino acids of the MDR). The MDR proteins have 2 domains: a C-terminal NAD(P) binding-Rossmann fold domain of a beta-alpha form and an N-terminal catalytic domain with distant homology to GroES. Length = 350

>gnl|CDD|176232 cd08271, MDR5, Medium chain dehydrogenases/reductase (MDR)/zinc-dependent alcohol dehydrogenase-like family

 Score = 70.0 bits (172), Expect = 2e-13
 Identities = 87/349 (24%), Positives = 127/349 (36%), Gaps = 58/349 (16%)

Query: 19  MAAWLL----GVNTLKIQPFELPSLGPYDVLVRMKAVGICGSDVHYLKTLRCADFVVKEP 74
           M AW+L        L ++  E+P  G  +VLV++ A G+   D   +     A      P
Sbjct: 1   MKAWVLPKPGAALQLTLEEIEIPGPGAGEVLVKVHAAGLNPVDWKVIAWGPPAW---SYP 57

Query: 75  MVIGHECAGVIEKVGSEVKTLVPGDRVALEPGISCWRCDHCKGGRYNLCPEMKFFATPPV 134
            V G + AGV+  VG++V     GDRVA           H    R               
Sbjct: 58  HVPGVDGAGVVVAVGAKVTGWKVGDRVAY----------HASLAR--------------- 92

Query: 135 HGSLANQVVHPADLCFKLPDNVSLEEGAM--CEPLSVGLHAC-RRANIGPETNVLIMGA- 190
            GS A   V  A     LPD++S EE A   C        A  ++  I     +LI G  
Sbjct: 93  GGSFAEYTVVDARAVLPLPDSLSFEEAAALPC-AGLTAYQALFKKLRIEAGRTILITGGA 151

Query: 191 GPIGLVTMLGAPRAFGAPRIVIVDVDDYRLSVAKEIGADNIVKVSTNLQDIAEEVEKIQK 250
           G +G   +  A +  G    VI           K +GAD    +  N +D+ E +++I  
Sbjct: 152 GGVGSFAVQLA-KRAGL--RVITTCSKRNFEYVKSLGAD--HVIDYNDEDVCERIKEITG 206

Query: 251 AMGTGIDVSFDCAG--LNKTMSTALGATCAGGKVCLVGMGHHEMTVPLTPAA-VREVDVV 307
             G G+D   D  G      ++  L     G  VC+ G        P T A  V EV + 
Sbjct: 207 --GRGVDAVLDTVGGETAAALAPTLAFN--GHLVCIQGRPDASPDPPFTRALSVHEVALG 262

Query: 308 GVFRY--KNTWP-------LCLELLRSGKIDVKPLVTHRFGFSQKEVEE 347
               +     W          LELL +GK++   +    F    + +  
Sbjct: 263 AAHDHGDPAAWQDLRYAGEELLELLAAGKLEPLVIEVLPFEQLPEALRA 311

This group is a member of the medium chain dehydrogenases/reductase (MDR)/zinc-dependent alcohol dehydrogenase-like family, but lacks the zinc-binding sites of the zinc-dependent alcohol dehydrogenases. The medium chain dehydrogenases/reductase (MDR)/zinc-dependent alcohol dehydrogenase-like family, which contains the zinc-dependent alcohol dehydrogenase (ADH-Zn) and related proteins, is a diverse group of proteins related to the first identified member, class I mammalian ADH. MDRs display a broad range of activities and are distinguished from the smaller short chain dehydrogenases (~ 250 amino acids vs. the ~ 350 amino acids of the MDR). The MDR proteins have 2 domains: a C-terminal NAD(P)-binding Rossmann fold domain of a beta-alpha form and an N-terminal catalytic domain with distant homology to GroES. The MDR group contains a host of activities, including the founding alcohol dehydrogenase (ADH), quinone reductase, sorbitol dehydrogenase, formaldehyde dehydrogenase, butanediol DH, ketose reductase, cinnamyl reductase, and numerous others. The zinc-dependent alcohol dehydrogenases (ADHs) catalyze the NAD(P)(H)-dependent interconversion of alcohols to aldehydes or ketones. Active site zinc has a catalytic role, while structural zinc aids in stability. ADH-like proteins typically form dimers (typically higher plants, mammals) or tetramers (yeast, bacteria), and generally have 2 tightly bound zinc atoms per subunit. The active site zinc is coordinated by a histidine, two cysteines, and a water molecule. The second zinc seems to play a structural role, affects subunit interactions, and is typically coordinated by 4 cysteines. Length = 325

>gnl|CDD|214840 smart00829, PKS_ER, Enoylreductase

 Score = 67.4 bits (166), Expect = 1e-12
 Identities = 44/160 (27%), Positives = 60/160 (37%), Gaps = 52/160 (32%)

Query: 46  VRMKAVGICGSDVHYLKTLRCADFVVKEPMVIGHECAGVIEKVGSEVKTLVPGDRVALEP 105
           + ++A G+   DV  L  L     +     V+G ECAGV+ +VG  V  L  GDRV    
Sbjct: 1   IEVRAAGLNFRDV--LIALG----LYPGEAVLGGECAGVVTRVGPGVTGLAVGDRVM--- 51

Query: 106 GISCWRCDHCKGGRYNLCPEMKFFATPPVHGSLANQVVHPADLCFKLPDNVSLEEGAMCE 165
           G+                            G+ A +VV  A L   +PD  S EE A   
Sbjct: 52  GL--------------------------APGAFATRVVTDARLVVPIPDGWSFEEAA--- 82

Query: 166 PLSV---------GLHACRRANIGPETNVLI-MGAGPIGL 195
             +V          L     A + P  +VLI   AG +G 
Sbjct: 83  --TVPVVFLTAYYALV--DLARLRPGESVLIHAAAGGVGQ 118

Enoylreductase in Polyketide synthases. Length = 287

>gnl|CDD|176251 cd08291, ETR_like_1, 2-enoyl thioester reductase (ETR) like proteins, child 1

 Score = 65.7 bits (161), Expect = 5e-12
 Identities = 65/262 (24%), Positives = 105/262 (40%), Gaps = 55/262 (20%)

Query: 11  KEDGEEVNMAAWLLGVNTLKIQPFELPSLGPYDVLVRMKAVGICGSDVHYLKTLRCADFV 70
           +E G+ +        V  L +   E+P  GP +VL++++A  I  SD+ +LK        
Sbjct: 7   EEYGKPLE-------VKELSLPEPEVPEPGPGEVLIKVEAAPINPSDLGFLKGQ--YGST 57

Query: 71  VKEPMVIGHECAGVIEKVGSEV--KTLVPGDRVALEPGISCWRCDHCKGGRYNLCPEMKF 128
              P+  G E +G +   G     ++L+ G RVA               G Y        
Sbjct: 58  KALPVPPGFEGSGTVVAAGGGPLAQSLI-GKRVA------------FLAGSY-------- 96

Query: 129 FATPPVHGSLANQVVHPADLCFKLPDNVSLEEGAMC--EPLSV-GLHACRRANIGPETNV 185
                  G+ A   V  A  C  LPD VS E+GA     PL+  G+    R   G +  V
Sbjct: 97  -------GTYAEYAVADAQQCLPLPDGVSFEQGASSFVNPLTALGMLETAREE-GAKAVV 148

Query: 186 LIMGAGPIGLVTMLGAPRAF---GAPRIVIVDVDDYRLSVAKEIGADNIVKVSTNLQDIA 242
               A  +G   ML   R     G   I IV   +  + + K+IGA+ +  ++++  D  
Sbjct: 149 HTAAASALG--RMLV--RLCKADGIKVINIVRRKEQ-VDLLKKIGAEYV--LNSSDPDFL 201

Query: 243 EEVEKIQKAMGTGIDVSFDCAG 264
           E+++++         + FD  G
Sbjct: 202 EDLKELIAK--LNATIFFDAVG 221

2-enoyl thioester reductase (ETR) like proteins. ETR catalyzes the NADPH-dependent conversion of trans-2-enoyl acyl carrier protein/coenzyme A (ACP/CoA) to acyl-(ACP/CoA) in fatty acid synthesis. 2-enoyl thioester reductase activity has been linked in Candida tropicalis as essential in maintaining mitiochondrial respiratory function. This ETR family is a part of the medium chain dehydrogenase/reductase family, but lack the zinc coordination sites characteristic of the 2-enoyl thioester reductase (ETR) like proteins. ETR catalyzes the NADPH-dependent dependent conversion of trans-2-enoyl acyl carrier protein/coenzyme A (ACP/CoA) to acyl-(ACP/CoA) in fatty acid synthesis. 2-enoyl thioester reductase activity has been linked in Candida tropicalis as essential in maintaining mitiochondrial respiratory function. This ETR family is a part of the medium chain dehydrogenase/reductase family, but lack the zinc coordination sites characteristic of the alcohol dehydrogenases in this family. NAD(P)(H)-dependent oxidoreductases are the major enzymes in the interconversion of alcohols and aldehydes, or ketones. Alcohol dehydrogenase in the liver converts ethanol and NAD+ to acetaldehyde and NADH, while in yeast and some other microorganisms ADH catalyzes the conversion acetaldehyde to ethanol in alcoholic fermentation. ADH is a member of the medium chain alcohol dehydrogenase family (MDR), which has a NAD(P)(H)-binding domain in a Rossmann fold of a beta-alpha form. The NAD(H)-binding region is comprised of 2 structurally similar halves, each of which contacts a mononucleotide. The N-terminal catalytic domain has a distant homology to GroES. These proteins typically form dimers (typically higher plants, mammals) or tetramers (yeast, bacteria), and have 2 tightly bound zinc atoms per subunit, a catalytic zinc at the active site and a structural zinc in a lobe of the catalytic domain. NAD(H) binding occurs in the cleft between the catalytic and coenzyme-binding domains at the active site, and coenzyme binding induces a conformational closing of this cleft. Coenzyme binding typically precedes and contributes to substrate binding. Candida tropicalis enoyl thioester reductase (Etr1p) catalyzes the NADPH-dependent reduction of trans-2-enoyl thioesters in mitochondrial fatty acid synthesis. Etr1p forms homodimers, with each subunit containing a nucleotide-binding Rossmann fold domain and a catalytic domain. Length = 324

>gnl|CDD|131869 TIGR02822, adh_fam_2, zinc-binding alcohol dehydrogenase family protein

 Score = 65.7 bits (160), Expect = 5e-12
 Identities = 50/165 (30%), Positives = 76/165 (46%), Gaps = 18/165 (10%)

Query: 35  ELPSLGPYDVLVRMKAVGICGSDVHYLKTLRCADFVVKEPMVI-GHECAGVIEKVGSEVK 93
            +P  GP ++LVR++A G+C +D+H  +     D  V  P V  GHE  G +   G++  
Sbjct: 21  PVPRPGPGELLVRVRACGVCRTDLHVSE----GDLPVHRPRVTPGHEVVGEVAGRGADAG 76

Query: 94  TLVPGDRVALEPGI-----SCWRCDHCKGGRYNLCPEMKFFATPPVHGSLANQVVHPADL 148
               GDRV    GI     +C  C +C+ G  NLCP  ++       G  A     PA  
Sbjct: 77  GFAVGDRV----GIAWLRRTCGVCRYCRRGAENLCPASRYTGW-DTDGGYAEYTTVPAAF 131

Query: 149 CFKLPDNVSLEEGA--MCEPLSVGLHACRRANIGPETNVLIMGAG 191
            ++LP      E A  +C  + +G  A  RA++ P   + + G G
Sbjct: 132 AYRLPTGYDDVELAPLLCAGI-IGYRALLRASLPPGGRLGLYGFG 175

Members of this model form a distinct subset of the larger family of oxidoreductases that includes zinc-binding alcohol dehydrogenases and NADPH:quinone reductases (pfam00107). The gene neighborhood of members of this family is not conserved and it appears that no members are characterized. The sequence of the family includes 6 invariant cysteine residues and one invariant histidine. It appears that no member is characterized [Energy metabolism, Fermentation]. Length = 329

>gnl|CDD|177834 PLN02178, PLN02178, cinnamyl-alcohol dehydrogenase

 Score = 63.9 bits (155), Expect = 3e-11
 Identities = 67/270 (24%), Positives = 115/270 (42%), Gaps = 25/270 (9%)

Query: 40  GPYDVLVRMKAVGICGSDVHYLKTLRCADFVVKEPMVIGHECAGVIEKVGSEVKTLVPGD 99
           G  DV V++   G+C SD+H   T++      + P++ GHE  G+  KVG  V     GD
Sbjct: 30  GENDVTVKILFCGVCHSDLH---TIKNHWGFSRYPIIPGHEIVGIATKVGKNVTKFKEGD 86

Query: 100 RVALEPGI-SCWRCDHCKGGRYNLCPEMKFFATPPVHGSLANQ------VVHPADLCFKL 152
           RV +   I SC  C+ C     N CP++ F           NQ      +V        +
Sbjct: 87  RVGVGVIIGSCQSCESCNQDLENYCPKVVFTYNSRSSDGTRNQGGYSDVIVVDHRFVLSI 146

Query: 153 PDNVSLEEGA--MCEPLSVGLHACRRANIGPET--NVLIMGAGPIGLVTMLGAPRAFGAP 208
           PD +  + GA  +C  ++V     +   +  E+   + + G G +G +  +   +AFG  
Sbjct: 147 PDGLPSDSGAPLLCAGITV-YSPMKYYGMTKESGKRLGVNGLGGLGHIA-VKIGKAFGLR 204

Query: 209 RIVIVDVDDYRLSVAKEIGADNIVKVSTNLQDIAEEVEKIQKAMGTGIDVSFDCAGLNKT 268
             VI    +        +GAD+ + V+T+ Q       K+++A+GT +D   D       
Sbjct: 205 VTVISRSSEKEREAIDRLGADSFL-VTTDSQ-------KMKEAVGT-MDFIIDTVSAEHA 255

Query: 269 MSTALGATCAGGKVCLVGMGHHEMTVPLTP 298
           +          GK+  +G+    + +P+ P
Sbjct: 256 LLPLFSLLKVSGKLVALGLPEKPLDLPIFP 285

Length = 375

>gnl|CDD|176199 cd08237, ribitol-5-phosphate_DH, ribitol-5-phosphate dehydrogenase

 Score = 62.8 bits (153), Expect = 5e-11
 Identities = 59/229 (25%), Positives = 96/229 (41%), Gaps = 31/229 (13%)

Query: 43  DVLVRMKAVGICGSDVHYLKTLRCADFVVKE-PMVIGHECAGVIEKVGSEVKTLVPGDRV 101
            V+VR   + IC +D  Y +  R  + + K+ PM + HE  GV+  V     T   G +V
Sbjct: 27  WVIVRPTYLSICHADQRYYQGNRSPEALKKKLPMALIHEGIGVV--VSDPTGTYKVGTKV 84

Query: 102 ALEPGISCWRCDHCKGGRYNLCPEMKFFATPPVHGSLANQVVHPADLCFKLPDNVSLEEG 161
            + P       +  +    N  P  +F ++    G + + V  P D   KLPDNV  E  
Sbjct: 85  VMVPNTPV---EKDEIIPENYLPSSRFRSSG-YDGFMQDYVFLPPDRLVKLPDNVDPEVA 140

Query: 162 AMCEPLSVGLHACRRAN---IGPETNVLIMGAGPIGLVTMLGAPRAFGAPRIVIVDVDDY 218
           A  E +SVG+HA  R           + + G G +G +T L   + +   ++V+      
Sbjct: 141 AFTELVSVGVHAISRFEQIAHKDRNVIGVWGDGNLGYITALLLKQIYPESKLVVFGKHQE 200

Query: 219 RL---SVAKEIGADNIVKVSTNLQDIAEEVEKIQKAMGTGIDVSFDCAG 264
           +L   S A E         +  + DI E++          +D +F+C G
Sbjct: 201 KLDLFSFADE---------TYLIDDIPEDLA---------VDHAFECVG 231

NAD-linked ribitol-5-phosphate dehydrogenase, a member of the MDR/zinc-dependent alcohol dehydrogenase-like family, oxidizes the phosphate ester of ribitol-5-phosphate to xylulose-5-phosphate of the pentose phosphate pathway. The medium chain dehydrogenases/reductase (MDR)/zinc-dependent alcohol dehydrogenase-like family, which contains the zinc-dependent alcohol dehydrogenase (ADH-Zn) and related proteins, is a diverse group of proteins related to the first identified member, class I mammalian ADH. MDRs display a broad range of activities and are distinguished from the smaller short chain dehydrogenases (~ 250 amino acids vs. the ~ 350 amino acids of the MDR). The MDR proteins have 2 domains: a C-terminal NAD(P) binding-Rossmann fold domain of a beta-alpha form and an N-terminal catalytic domain with distant homology to GroES. The MDR group contains a host of activities, including the founding alcohol dehydrogenase (ADH), quinone reductase, sorbitol dehydrogenase, formaldehyde dehydrogenase, butanediol DH, ketose reductase, cinnamyl reductase, and numerous others. The zinc-dependent alcohol dehydrogenases (ADHs) catalyze the NAD(P)(H)-dependent interconversion of alcohols to aldehydes or ketones. Active site zinc has a catalytic role, while structural zinc aids in stability. Length = 341

>gnl|CDD|173547 PTZ00354, PTZ00354, alcohol dehydrogenase; Provisional

 Score = 61.6 bits (150), Expect = 1e-10
 Identities = 59/250 (23%), Positives = 96/250 (38%), Gaps = 52/250 (20%)

Query: 25  GVNTLKIQPFELPSLGPYDVLVRMKAVGICGSDV-----HYLKTLRCADFVVKEPMVIGH 79
           GV+ LKI     P+    DVL+++ A G+  +D       Y      ++       ++G 
Sbjct: 12  GVDVLKIGESPKPAPKRNDVLIKVSAAGVNRADTLQRQGKYPPPPGSSE-------ILGL 64

Query: 80  ECAGVIEKVGSEVKTLVPGDRV-ALEPGISCWRCDHCKGGRYNLCPEMKFFATPPVHGSL 138
           E AG +E VGS+VK    GDRV AL PG                             G  
Sbjct: 65  EVAGYVEDVGSDVKRFKEGDRVMALLPG-----------------------------GGY 95

Query: 139 ANQVVHPADLCFKLPDNVSLEE-GAMCEPLSVGLHACRR-ANIGPETNVLI-MGAGPIGL 195
           A   V        +P   + EE  A+ E         ++  ++    +VLI  GA  +G 
Sbjct: 96  AEYAVAHKGHVMHIPQGYTFEEAAAIPEAFLTAWQLLKKHGDVKKGQSVLIHAGASGVGT 155

Query: 196 VTMLGAPRAFGAPRIVIVDVDDYRLSVAKEIGADNIVKVSTNLQDIAEEVEKIQKAMG-T 254
                A   +GA  I+    ++ ++   K++ A  ++       D      K++K  G  
Sbjct: 156 AAAQLA-EKYGAATIITTSSEE-KVDFCKKLAAIILI----RYPDEEGFAPKVKKLTGEK 209

Query: 255 GIDVSFDCAG 264
           G+++  DC G
Sbjct: 210 GVNLVLDCVG 219

Length = 334

>gnl|CDD|166155 PLN02514, PLN02514, cinnamyl-alcohol dehydrogenase

 Score = 60.6 bits (147), Expect = 3e-10
 Identities = 64/263 (24%), Positives = 112/263 (42%), Gaps = 24/263 (9%)

Query: 34  FELPSLGPYDVLVRMKAVGICGSDVHYLKT-LRCADFVVKEPMVIGHECAGVIEKVGSEV 92
           + L   GP DV++++   GIC +D+H +K  L  +++    PMV GHE  G + +VGS+V
Sbjct: 27  YTLRKTGPEDVVIKVIYCGICHTDLHQIKNDLGMSNY----PMVPGHEVVGEVVEVGSDV 82

Query: 93  KTLVPGDRVALEPGI-SCWRCDHCKGGRYNLCPEMKFFAT------PPVHGSLANQVVHP 145
                GD V +   +  C  C  CK      C +  +          P  G  A+ +V  
Sbjct: 83  SKFTVGDIVGVGVIVGCCGECSPCKSDLEQYCNKRIWSYNDVYTDGKPTQGGFASAMVVD 142

Query: 146 ADLCFKLPDNVSLEEGA--MCEPLSVGLHACRRANIGPETNVLIMGAGPIGLVTMLGAPR 203
                K+P+ ++ E+ A  +C  ++V                 I+G G +G + +  A +
Sbjct: 143 QKFVVKIPEGMAPEQAAPLLCAGVTVYSPLSHFGLKQSGLRGGILGLGGVGHMGVKIA-K 201

Query: 204 AFGAPRIVIVDVDDYRLSVAKEIGADNIVKVSTNLQDIAEEVEKIQKAMGTGIDVSFDCA 263
           A G    VI   D  R    + +GAD+ +        ++ +  ++Q+A    +D   D  
Sbjct: 202 AMGHHVTVISSSDKKREEALEHLGADDYL--------VSSDAAEMQEA-ADSLDYIIDTV 252

Query: 264 GLNKTMSTALGATCAGGKVCLVG 286
            +   +   L      GK+ L+G
Sbjct: 253 PVFHPLEPYLSLLKLDGKLILMG 275

Length = 357

>gnl|CDD|176208 cd08246, crotonyl_coA_red, crotonyl-CoA reductase

 Score = 60.1 bits (146), Expect = 5e-10
 Identities = 51/209 (24%), Positives = 80/209 (38%), Gaps = 16/209 (7%)

Query: 37  PSLGPYDVLVRMKAVGICGSDVHYLKTL------RCADFVVKEPM-VIGHECAGVIEKVG 89
           P LGP +VLV + A G+  ++V                    EP  + G + +G++  VG
Sbjct: 38  PELGPGEVLVAVMAAGVNYNNVWAALGEPVSTFAARQRRGRDEPYHIGGSDASGIVWAVG 97

Query: 90  SEVKTLVPGDRVALEPGISCWRCDHCKGGRYNLCPEMKFFATPPVHGSLANQVVHPADLC 149
             VK    GD V +   +         GG     P  + +     +GS A   +  A   
Sbjct: 98  EGVKNWKVGDEVVVHCSVWDGNDPERAGGDPMFDPSQRIWGYETNYGSFAQFALVQATQL 157

Query: 150 FKLPDNVSLEEGAMCEPLSVG-----LHACRRANIGPETNVLIMGA-GPIGLVTMLGAPR 203
              P ++S EE A    L        L       + P  NVLI GA G +G + +  A  
Sbjct: 158 MPKPKHLSWEEAA-AYMLVGATAYRMLFGWNPNTVKPGDNVLIWGASGGLGSMAIQLARA 216

Query: 204 AFGAPRIVIVDVDDYRLSVAKEIGADNIV 232
           A   P  V V   + +    + +GA+ ++
Sbjct: 217 AGANP--VAVVSSEEKAEYCRALGAEGVI 243

Crotonyl-CoA reductase, a member of the medium chain dehydrogenase/reductase family, catalyzes the NADPH-dependent conversion of crotonyl-CoA to butyryl-CoA, a step in (2S)-methylmalonyl-CoA production for straight-chain fatty acid biosynthesis. Like enoyl reductase, another enzyme in fatty acid synthesis, crotonyl-CoA reductase is a member of the zinc-dependent alcohol dehydrogenase-like medium chain dehydrogenase/reductase family. The medium chain dehydrogenases/reductase (MDR)/zinc-dependent alcohol dehydrogenase-like family, which contains the zinc-dependent alcohol dehydrogenase (ADH-Zn) and related proteins, is a diverse group of proteins related to the first identified member, class I mammalian ADH. MDRs display a broad range of activities and are distinguished from the smaller short chain dehydrogenases (~ 250 amino acids vs. the ~ 350 amino acids of the MDR). The MDR proteins have 2 domains: a C-terminal NAD(P) binding-Rossmann fold domain of a beta-alpha form and an N-terminal catalytic domain with distant homology to GroES. Length = 393

>gnl|CDD|176214 cd08252, AL_MDR, Arginate lyase and other MDR family members

 Score = 56.0 bits (136), Expect = 8e-09
 Identities = 24/65 (36%), Positives = 34/65 (52%), Gaps = 3/65 (4%)

Query: 37  PSLGPYDVLVRMKAVGICGSDVHYLKTLRCADFVVKEPMVIGHECAGVIEKVGSEVKTLV 96
           P  G  D+LVR++AV +   D    K       V  +P ++G + +GV+E VGSEV    
Sbjct: 26  PVPGGRDLLVRVEAVSVNPVDT---KVRAGGAPVPGQPKILGWDASGVVEAVGSEVTLFK 82

Query: 97  PGDRV 101
            GD V
Sbjct: 83  VGDEV 87

This group contains a structure identified as an arginate lyase. Other members are identified quinone reductases, alginate lyases, and other proteins related to the zinc-dependent dehydrogenases/reductases. QOR catalyzes the conversion of a quinone and NAD(P)H to a hydroquinone and NAD(P+. Quinones are cyclic diones derived from aromatic compounds. Membrane bound QOR acts in the respiratory chains of bacteria and mitochondria, while soluble QOR acts to protect from toxic quinones (e.g. DT-diaphorase) or as a soluble eye-lens protein in some vertebrates (e.g. zeta-crystalin). QOR reduces quinones through a semi-quinone intermediate via a NAD(P)H-dependent single electron transfer. QOR is a member of the medium chain dehydrogenase/reductase family, but lacks the zinc-binding sites of the prototypical alcohol dehydrogenases of this group. Alcohol dehydrogenase in the liver converts ethanol and NAD+ to acetaldehyde and NADH, while in yeast and some other microorganisms ADH catalyzes the conversion acetaldehyde to ethanol in alcoholic fermentation. ADH is a member of the medium chain alcohol dehydrogenase family (MDR), which has a NAD(P)(H)-binding domain in a Rossmann fold of a beta-alpha form. The NAD(H)-binding region is comprised of 2 structurally similar halves, each of which contacts a mononucleotide. The N-terminal catalytic domain has a distant homology to GroES. These proteins typically form dimers (typically higher plants, mammals) or tetramers (yeast, bacteria), and have 2 tightly bound zinc atoms per subunit, a catalytic zinc at the active site and a structural zinc in a lobe of the catalytic domain. NAD(H) binding occurs in the cleft between the catalytic and coenzyme-binding domains at the active site, and coenzyme binding induces a conformational closing of this cleft. Coenzyme binding typically precedes and contributes to substrate binding. In human ADH catalysis, the zinc ion helps coordinate the alcohol, followed by deprotonation of a histidine, the ribose of NAD, a serine, then the alcohol, which allows the transfer of a hydride to NAD+, creating NADH and a zinc-bound aldehyde or ketone. In yeast and some bacteria, the active site zinc binds an aldehyde, polarizing it, and leading to the reverse reaction. Length = 336

>gnl|CDD|176252 cd08292, ETR_like_2, 2-enoyl thioester reductase (ETR) like proteins, child 2

 Score = 55.0 bits (133), Expect = 2e-08
 Identities = 80/291 (27%), Positives = 105/291 (36%), Gaps = 48/291 (16%)

Query: 26  VNTLKIQPFELPSLGPYDVLVRMKAVGICGSDVHYLKTLRCADFVVKE-PMVIGHECAGV 84
            + L+I     P+ G  +VLVR     I   D   L T+R       E P + G E  GV
Sbjct: 13  ADVLEIGEVPKPTPGAGEVLVRTTLSPIHNHD---LWTIRGTYGYKPELPAIGGSEAVGV 69

Query: 85  IEKVGSEVKTLVPGDRVALEPGISCWRCDHCKGGRYNLCPEMKFFATPPVHGSLANQVVH 144
           ++ VG  VK L  G RVA                              PVHG+ A   V 
Sbjct: 70  VDAVGEGVKGLQVGQRVA-------------------------VA---PVHGTWAEYFVA 101

Query: 145 PADLCFKLPDNVSLEEGAM--CEPLSVGLHACRRANIGP-ETNVLIMGAGPIG-LVTMLG 200
           PAD    LPD +S E  A     PLS  L       + P +  +     G +G LV ML 
Sbjct: 102 PADGLVPLPDGISDEVAAQLIAMPLS-ALMLLDFLGVKPGQWLIQNAAGGAVGKLVAMLA 160

Query: 201 APRAFGAPRIVIVDVDDYRLSVAKEIGADNIVKV-STNLQDIAEEVEKIQKAMGTGIDVS 259
           A R      +V       R +   E+ A  I  V ST      ++V +   A G  I V+
Sbjct: 161 AARGINVINLV------RRDAGVAELRALGIGPVVSTEQPGWQDKVREA--AGGAPISVA 212

Query: 260 FDCAGLNKTMSTALGATCAGGKVCLVG-MGHHEMTVPLTPAAVREVDVVGV 309
            D  G  K     L     GG +   G M    M +       ++  V G 
Sbjct: 213 LDSVG-GKLAGELLSLLGEGGTLVSFGSMSGEPMQISSGDLIFKQATVRGF 262

2-enoyl thioester reductase (ETR) like proteins. ETR catalyzes the NADPH-dependent conversion of trans-2-enoyl acyl carrier protein/coenzyme A (ACP/CoA) to acyl-(ACP/CoA) in fatty acid synthesis. 2-enoyl thioester reductase activity has been linked in Candida tropicalis as essential in maintaining mitiochondrial respiratory function. This ETR family is a part of the medium chain dehydrogenase/reductase family, but lack the zinc coordination sites characteristic of the 2-enoyl thioester reductase (ETR) like proteins. ETR catalyzes the NADPH-dependent dependent conversion of trans-2-enoyl acyl carrier protein/coenzyme A (ACP/CoA) to acyl-(ACP/CoA) in fatty acid synthesis. 2-enoyl thioester reductase activity has been linked in Candida tropicalis as essential in maintaining mitiochondrial respiratory function. This ETR family is a part of the medium chain dehydrogenase/reductase family, but lack the zinc coordination sites characteristic of the alcohol dehydrogenases in this family. NAD(P)(H)-dependent oxidoreductases are the major enzymes in the interconversion of alcohols and aldehydes, or ketones. Alcohol dehydrogenase in the liver converts ethanol and NAD+ to acetaldehyde and NADH, while in yeast and some other microorganisms ADH catalyzes the conversion acetaldehyde to ethanol in alcoholic fermentation. ADH is a member of the medium chain alcohol dehydrogenase family (MDR), which has a NAD(P)(H)-binding domain in a Rossmann fold of a beta-alpha form. The NAD(H)-binding region is comprised of 2 structurally similar halves, each of which contacts a mononucleotide. The N-terminal catalytic domain has a distant homology to GroES. These proteins typically form dimers (typically higher plants, mammals) or tetramers (yeast, bacteria), and have 2 tightly bound zinc atoms per subunit, a catalytic zinc at the active site, and a structural zinc in a lobe of the catalytic domain. NAD(H) binding occurs in the cleft between the catalytic and coenzyme-binding domains, at the active site, and coenzyme binding induces a conformational closing of this cleft. Coenzyme binding typically precedes and contributes to substrate binding. Candida tropicalis enoyl thioester reductase (Etr1p) catalyzes the NADPH-dependent reduction of trans-2-enoyl thioesters in mitochondrial fatty acid synthesis. Etr1p forms homodimers, with each subunit containing a nucleotide-binding Rossmann fold domain and a catalytic domain. Length = 324

>gnl|CDD|176234 cd08273, MDR8, Medium chain dehydrogenases/reductase (MDR)/zinc-dependent alcohol dehydrogenase-like family

 Score = 53.4 bits (129), Expect = 5e-08
 Identities = 84/372 (22%), Positives = 126/372 (33%), Gaps = 89/372 (23%)

Query: 25  GVNTLKIQPFELPSLGPYDVLVRMKAVGICGSDVHYLKTLRCADFVVKEPMVIGHECAGV 84
           G   LK+   +LP     +V+V+++A G+  +DV   + L         P   G++  G 
Sbjct: 11  GPEVLKVVEADLPEPAAGEVVVKVEASGVSFADVQMRRGLYP--DQPPLPFTPGYDLVGR 68

Query: 85  IEKVGSEVKTLVPGDRVALEPGISCWRCDHCKGGRYNLCPEMKFFATPPVHGSLANQVVH 144
           ++ +GS V     GDRVA                           A   V G  A  +  
Sbjct: 69  VDALGSGVTGFEVGDRVA---------------------------ALTRV-GGNAEYINL 100

Query: 145 PADLCFKLPDNVSLEEGAMCEPLSV-----GLHACRRANIGPETNVLIMGA-GPIG---- 194
            A     +P+ V   E A+C  L+       LH  R A +     VLI GA G +G    
Sbjct: 101 DAKYLVPVPEGVDAAE-AVCLVLNYVTAYQMLH--RAAKVLTGQRVLIHGASGGVGQALL 157

Query: 195 -LVTMLGAPRAFGAPRIVIVDVDDYRLSVAKEIGADNIVKVSTNLQDIAEEVEKIQKAMG 253
            L  + GA   +G          +   +  +E+GA       T +    ++        G
Sbjct: 158 ELALLAGA-EVYGT-------ASERNHAALRELGA-------TPIDYRTKDWLPAMLTPG 202

Query: 254 TGIDVSFDCAGLNKTMSTALGATCAGGKVCLVGM-----GHHEMTVPLTPAAV------- 301
            G+DV FD  G  ++   +  A   GG +   G              L            
Sbjct: 203 -GVDVVFDGVGG-ESYEESYAALAPGGTLVCYGGNSSLLQGRRSLAALGSLLARLAKLKL 260

Query: 302 ----REVDVVGVFRYKNTWP--------LCLELLRSGKIDVKPLVTHRFGFSQKEVEEAF 349
               R      V+R +   P          L+LL  GKI  +P +  R   S  EV EA 
Sbjct: 261 LPTGRRATFYYVWRDRAEDPKLFRQDLTELLDLLAKGKI--RPKIAKRLPLS--EVAEAH 316

Query: 350 ETSARGGTAIKV 361
                G    K+
Sbjct: 317 RLLESGKVVGKI 328

This group is a member of the medium chain dehydrogenases/reductase (MDR)/zinc-dependent alcohol dehydrogenase-like family, but lacks the zinc-binding sites of the zinc-dependent alcohol dehydrogenases. The medium chain dehydrogenases/reductase (MDR)/zinc-dependent alcohol dehydrogenase-like family, which contains the zinc-dependent alcohol dehydrogenase (ADH-Zn) and related proteins, is a diverse group of proteins related to the first identified member, class I mammalian ADH. MDRs display a broad range of activities and are distinguished from the smaller short chain dehydrogenases (~ 250 amino acids vs. the ~ 350 amino acids of the MDR). The MDR proteins have 2 domains: a C-terminal NAD(P)-binding Rossmann fold domain of a beta-alpha form and an N-terminal catalytic domain with distant homology to GroES. The MDR group contains a host of activities, including the founding alcohol dehydrogenase (ADH), quinone reductase, sorbitol dehydrogenase, formaldehyde dehydrogenase, butanediol DH, ketose reductase, cinnamyl reductase, and numerous others. The zinc-dependent alcohol dehydrogenases (ADHs) catalyze the NAD(P)(H)-dependent interconversion of alcohols to aldehydes or ketones. Active site zinc has a catalytic role, while structural zinc aids in stability. ADH-like proteins typically form dimers (typically higher plants, mammals) or tetramers (yeast, bacteria), and generally have 2 tightly bound zinc atoms per subunit. The active site zinc is coordinated by a histidine, two cysteines, and a water molecule. The second zinc seems to play a structural role, affects subunit interactions, and is typically coordinated by 4 cysteines. Length = 331

>gnl|CDD|188164 TIGR01751, crot-CoA-red, crotonyl-CoA reductase

 Score = 53.6 bits (129), Expect = 7e-08
 Identities = 56/215 (26%), Positives = 86/215 (40%), Gaps = 25/215 (11%)

Query: 36  LPSLGPYDVLVRMKAVGI--------CGSDVHYLKTLRCADFVVKEPMVIGHECAGVIEK 87
           +P LGP +VLV + A G+         G  V     LR    +     +IG + +GV+ +
Sbjct: 32  VPELGPGEVLVAVMAAGVNYNNVWAALGEPVSTFAFLRKYGKLDLPFHIIGSDASGVVWR 91

Query: 88  VGSEVKTLVPGDRVALEPGISCWRCD----HCKGGRYNLCPEMKFFATPPVHGSLANQVV 143
           VG  V     GD V      SC + D      + G   L  E + +      GS A   +
Sbjct: 92  VGPGVTRWKVGDEVV----ASCLQVDLTAPDGRDGDPMLSSEQRIWGYETNFGSFAEFAL 147

Query: 144 HPADLCFKLPDNVSLEEGAMCEPLSVG-----LHACRRANIGPETNVLIMGA-GPIGLVT 197
                    P +++ EE A C  L+       L     A + P  NVLI GA G +G   
Sbjct: 148 VKDYQLMPKPKHLTWEEAA-CPGLTGATAYRQLVGWNPAAVKPGDNVLIWGAAGGLGSYA 206

Query: 198 MLGAPRAFGAPRIVIVDVDDYRLSVAKEIGADNIV 232
              A RA G   + +V   + +    + +GA+ ++
Sbjct: 207 TQLA-RAGGGNPVAVVSSPE-KAEYCRSLGAEAVI 239

The enzyme modelled by This model is responsible for the conversion of crotonyl-CoA reductase to butyryl-CoA. In serine cycle methylotrophic bacteria this enzyme is involved in the process of acetyl-CoA to glyoxylate. In other bacteria the enzyme is used to produce butyrate for incorporation into polyketides such as tylosin from Streptomyces fradiae and coronatine from Pseudomonas syringae. Length = 398

>gnl|CDD|176205 cd08243, quinone_oxidoreductase_like_1, Quinone oxidoreductase (QOR)

 Score = 53.0 bits (128), Expect = 8e-08
 Identities = 66/263 (25%), Positives = 104/263 (39%), Gaps = 40/263 (15%)

Query: 28  TLKIQPFELPSLGPYDVLVRMKAVGICGSDVHYLKTLRCADFVVKEPMVIGHECAGVIEK 87
            LK++   +P   P  VL+R+KA G+  S++    T +     VK P V+G E  G +E+
Sbjct: 14  VLKLREIPIPEPKPGWVLIRVKAFGLNRSEIF---TRQGHSPSVKFPRVLGIEAVGEVEE 70

Query: 88  VGSEVKTLVPGDRVALEPGISCWRCDHCKGGRYNLCPEMKFFATPPVHGSLANQVVHPAD 147
                 T  PG RVA   G                   M         GS A   + P +
Sbjct: 71  APGG--TFTPGQRVATAMG------------------GMGR----TFDGSYAEYTLVPNE 106

Query: 148 LCFKLPDNVSLEE-GAMCEPLSVGLHACRRA-NIGPETNVLIMGA-GPIGLVTMLGAPRA 204
             + +  ++S  E  A+ E       +  R+  + P   +LI G    +GL   L   +A
Sbjct: 107 QVYAIDSDLSWAELAALPETYYTAWGSLFRSLGLQPGDTLLIRGGTSSVGL-AALKLAKA 165

Query: 205 FGAPRIVIVDVDDYRLSVAKEIGADNIVKVSTNLQDIAEEVEKIQKAMGTGIDVSFDCAG 264
            G   +        R ++ KE+GAD +V    +   IAE++         G D   +  G
Sbjct: 166 LG-ATVTATTRSPERAALLKELGADEVV---IDDGAIAEQLRAA----PGGFDKVLELVG 217

Query: 265 LNKTMSTALGATCAGGKVCLVGM 287
              T+  +L     GG VC+ G+
Sbjct: 218 -TATLKDSLRHLRPGGIVCMTGL 239

NAD(P)(H)-dependent oxidoreductases are the major enzymes in the interconversion of alcohols and aldehydes, or ketones. The medium chain alcohol dehydrogenase family (MDR) have a NAD(P)(H)-binding domain in a Rossmann fold of a beta-alpha form. The N-terminal region typically has an all-beta catalytic domain. These proteins typically form dimers (typically higher plants, mammals) or tetramers (yeast, bacteria), and have 2 tightly bound zinc atoms per subunit. Length = 320

>gnl|CDD|176206 cd08244, MDR_enoyl_red, Possible enoyl reductase

 Score = 51.6 bits (124), Expect = 2e-07
 Identities = 74/283 (26%), Positives = 102/283 (36%), Gaps = 48/283 (16%)

Query: 37  PSLGPYDVLVRMKAVGICGSDVHYLKT-LRCA----DFVVKEPMVIGHECAGVIEKVGSE 91
           P  GP  V + + A G     VH++ T LR       F  + P V G E AGV++ VG  
Sbjct: 23  PVPGPGQVRIAVAAAG-----VHFVDTQLRSGWGPGPFPPELPYVPGGEVAGVVDAVGPG 77

Query: 92  VKTLVPGDRVALEPGISCWRCDHCKGGRYNLCPEMKFFATPPVHGSLANQVVHPADLCFK 151
           V     G RV                             T    G  A   V   D    
Sbjct: 78  VDPAWLGRRVVAH--------------------------TGRAGGGYAELAVADVDSLHP 111

Query: 152 LPDNVSLEEG-AMCEPLSVGLHACRRANIGPETNVLIMGA-GPIG-LVTMLGAPRAFGAP 208
           +PD + LE   A+       L     A + P   VL+  A G +G L+  L   +A GA 
Sbjct: 112 VPDGLDLEAAVAVVHDGRTALGLLDLATLTPGDVVLVTAAAGGLGSLLVQLA--KAAGA- 168

Query: 209 RIVIVDVDDYRLSVAKEIGADNIVKVSTNLQDIAEEVEKIQKAMGTGIDVSFDCAGLNKT 268
            +V       + ++ + +GAD  V V     D  ++V   +   G G+ V  D  G    
Sbjct: 169 TVVGAAGGPAKTALVRALGAD--VAVDYTRPDWPDQVR--EALGGGGVTVVLDGVG-GAI 223

Query: 269 MSTALGATCAGGKVCLVGMGHHEMT-VPLTPAAVREVDVVGVF 310
              AL     GG+    G    E T +    A  R V VVG+ 
Sbjct: 224 GRAALALLAPGGRFLTYGWASGEWTALDEDDARRRGVTVVGLL 266

Member identified as possible enoyl reductase of the MDR family. 2-enoyl thioester reductase (ETR) catalyzes the NADPH-dependent dependent conversion of trans-2-enoyl acyl carrier protein/coenzyme A (ACP/CoA) to acyl-(ACP/CoA) in fatty acid synthesis. 2-enoyl thioester reductase activity has been linked in Candida tropicalis as essential in maintaining mitiochondrial respiratory function. This ETR family is a part of the medium chain dehydrogenase/reductase family, but lack the zinc coordination sites characteristic of the alcohol dehydrogenases in this family. NAD(P)(H)-dependent oxidoreductases are the major enzymes in the interconversion of alcohols and aldehydes, or ketones. Alcohol dehydrogenase in the liver converts ethanol and NAD+ to acetaldehyde and NADH, while in yeast and some other microorganisms ADH catalyzes the conversion acetaldehyde to ethanol in alcoholic fermentation. ADH is a member of the medium chain alcohol dehydrogenase family (MDR), which has a NAD(P)(H)-binding domain in a Rossmann fold of a beta-alpha form. The NAD(H)-binding region is comprised of 2 structurally similar halves, each of which contacts a mononucleotide. The N-terminal catalytic domain has a distant homology to GroES. These proteins typically form dimers (typically higher plants, mammals) or tetramers (yeast, bacteria), and have 2 tightly bound zinc atoms per subunit, a catalytic zinc at the active site, and a structural zinc in a lobe of the catalytic domain. NAD(H) binding occurs in the cleft between the catalytic and coenzyme-binding domains at the active site, and coenzyme binding induces a conformational closing of this cleft. Coenzyme binding typically precedes and contributes to substrate binding. Candida tropicalis enoyl thioester reductase (Etr1p) catalyzes the NADPH-dependent reduction of trans-2-enoyl thioesters in mitochondrial fatty acid synthesis. Etr1p forms homodimers, with each subunit containing a nucleotide-binding Rossmann fold domain and a catalytic domain. Length = 324

>gnl|CDD|176250 cd08290, ETR, 2-enoyl thioester reductase (ETR)

 Score = 51.5 bits (124), Expect = 3e-07
 Identities = 90/365 (24%), Positives = 141/365 (38%), Gaps = 71/365 (19%)

Query: 29  LKIQPFELPSLGPYD-VLVRMKAVGICGSDVH-----YLKTLRCADFVVKEPMVIGHECA 82
           L+++ +E+P  GP + VLV+M A  I  +D++     Y           + P V G+E  
Sbjct: 16  LQLESYEIPPPGPPNEVLVKMLAAPINPADINQIQGVYPIK---PPTTPEPPAVGGNEGV 72

Query: 83  GVIEKVGSEVKTLVPGDRVALEPGISCWRCDHCKGGRYNLCPEMKFFATPPVHGSLANQV 142
           G + KVGS VK+L PGD V                               P  G+     
Sbjct: 73  GEVVKVGSGVKSLKPGDWV---------------------------IPLRPGLGTWRTHA 105

Query: 143 VHPADLCFKLPDNVSLEEGAMCEPLSVGLHACRR-----ANIGPETNVLIMGA-GPIGL- 195
           V PAD   K+P++V  E+ A    LSV      R       + P   V+  GA   +G  
Sbjct: 106 VVPADDLIKVPNDVDPEQAAT---LSVNPCTAYRLLEDFVKLQPGDWVIQNGANSAVGQA 162

Query: 196 VTMLGAPRAFGAPRI-VIVDVDDYRLSVA--KEIGADNIVKVSTNLQDIAEEVEKIQKAM 252
           V  L   +  G   I V+ D  D        K +GAD+++        +A E+ K   A 
Sbjct: 163 VIQLA--KLLGIKTINVVRDRPDLEELKERLKALGADHVLTEEELRSLLATELLK--SAP 218

Query: 253 GTGIDVSFDCAGLNKT--MSTALGATCAGGK-VCLVGMGHHEMTVPLTPAAVREVDVVGV 309
           G    ++ +C G      ++  L     GG  V   GM    +TVP +    +++ + G 
Sbjct: 219 GGRPKLALNCVGGKSATELARLLS---PGGTMVTYGGMSGQPVTVPTSLLIFKDITLRGF 275

Query: 310 FRYKNT-------WPLCL----ELLRSGKIDVKPLVTHRFGFSQKEVEEAFETSARGGTA 358
           +  +             L    EL+R GK+   P V        +E ++A   + +GG  
Sbjct: 276 WLTRWLKRANPEEKEDMLEELAELIREGKL-KAPPVEKVTDDPLEEFKDALANALKGGGG 334

Query: 359 IKVMF 363
            K + 
Sbjct: 335 GKQVL 339

2-enoyl thioester reductase (ETR) catalyzes the NADPH-dependent conversion of trans-2-enoyl acyl carrier protein/coenzyme A (ACP/CoA) to acyl-(ACP/CoA) in fatty acid synthesis. 2-enoyl thioester reductase activity has been linked in Candida tropicalis as essential in maintaining mitiochondrial respiratory function. This ETR family is a part of the medium chain dehydrogenase/reductase family, but lack the zinc coordination sites characteristic of the alcohol dehydrogenases in this family. NAD(P)(H)-dependent oxidoreductases are the major enzymes in the interconversion of alcohols and aldehydes, or ketones. Alcohol dehydrogenase in the liver converts ethanol and NAD+ to acetaldehyde and NADH, while in yeast and some other microorganisms ADH catalyzes the conversion acetaldehyde to ethanol in alcoholic fermentation. ADH is a member of the medium chain alcohol dehydrogenase family (MDR), which has a NAD(P)(H)-binding domain in a Rossmann fold of a beta-alpha form. The NAD(H)-binding region is comprised of 2 structurally similar halves, each of which contacts a mononucleotide. The N-terminal catalytic domain has a distant homology to GroES. These proteins typically form dimers (typically higher plants, mammals) or tetramers (yeast, bacteria), and have 2 tightly bound zinc atoms per subunit, a catalytic zinc at the active site, and a structural zinc in a lobe of the catalytic domain. NAD(H) binding occurs in the cleft between the catalytic and coenzyme-binding domains, at the active site, and coenzyme binding induces a conformational closing of this cleft. Coenzyme binding typically precedes and contributes to substrate binding. Candida tropicalis enoyl thioester reductase (Etr1p) catalyzes the NADPH-dependent reduction of trans-2-enoyl thioesters in mitochondrial fatty acid synthesis. Etr1p forms homodimers, with each subunit containing a nucleotide-binding Rossmann fold domain and a catalytic domain. Length = 341

>gnl|CDD|176213 cd08251, polyketide_synthase, polyketide synthase

 Score = 49.7 bits (119), Expect = 8e-07
 Identities = 58/228 (25%), Positives = 89/228 (39%), Gaps = 40/228 (17%)

Query: 35  ELPSLGPYDVLVRMKAVGICGSDVHYLKTLRCADFVVKEPMVIGHECAGVIEKVGSEVKT 94
           E+   GP +V ++++A  +   D+  ++ L     +   P   G E +GV+  VG  V  
Sbjct: 1   EVAPPGPGEVRIQVRAFSLNFGDLLCVRGLYPT--MPPYPFTPGFEASGVVRAVGPHVTR 58

Query: 95  LVPGDRVALEPGISCWRCDHCKGGRYNLCPEMKFFATPPVHGSLANQVVHPADLCFKLPD 154
           L  GD V    G                   M         G  A  V  P D   + P 
Sbjct: 59  LAVGDEVIAGTG-----------------ESM---------GGHATLVTVPEDQVVRKPA 92

Query: 155 NVSLEEGAMCEPLSVGL---HACRRANIGPETNVLIMGA-GPIGLVTMLGAPRAFGAPRI 210
           ++S EE   C    V L    A  RA +    ++LI  A G  GL+ +  A R  GA   
Sbjct: 93  SLSFEEA--CALPVVFLTVIDAFARAGLAKGEHILIQTATGGTGLMAVQLA-RLKGAEIY 149

Query: 211 VIVDVDDYRLSVAKEIGADNIVKVSTNLQDIAEEVEKIQKAMGTGIDV 258
                DD +L   K++G  +++       D  EE+ ++    G G+DV
Sbjct: 150 ATASSDD-KLEYLKQLGVPHVINYVEE--DFEEEIMRLTG--GRGVDV 192

Polyketide synthases produce polyketides in step by step mechanism that is similar to fatty acid synthesis. Enoyl reductase reduces a double to single bond. Erythromycin is one example of a polyketide generated by 3 complex enzymes (megasynthases). 2-enoyl thioester reductase (ETR) catalyzes the NADPH-dependent dependent conversion of trans-2-enoyl acyl carrier protein/coenzyme A (ACP/CoA) to acyl-(ACP/CoA) in fatty acid synthesis. 2-enoyl thioester reductase activity has been linked in Candida tropicalis as essential in maintaining mitiochondrial respiratory function. This ETR family is a part of the medium chain dehydrogenase/reductase family, but lack the zinc coordination sites characteristic of the alcohol dehydrogenases in this family. NAD(P)(H)-dependent oxidoreductases are the major enzymes in the interconversion of alcohols and aldehydes, or ketones. Alcohol dehydrogenase in the liver converts ethanol and NAD+ to acetaldehyde and NADH, while in yeast and some other microorganisms ADH catalyzes the conversion acetaldehyde to ethanol in alcoholic fermentation. ADH is a member of the medium chain alcohol dehydrogenase family (MDR), which have a NAD(P)(H)-binding domain in a Rossmann fold of a beta-alpha form. The NAD(H)-binding region is comprised of 2 structurally similar halves, each of which contacts a mononucleotide. The N-terminal catalytic domain has a distant homology to GroES. These proteins typically form dimers (typically higher plants, mammals) or tetramers (yeast, bacteria), and have 2 tightly bound zinc atoms per subunit, a catalytic zinc at the active site, and a structural zinc in a lobe of the catalytic domain. NAD(H)-binding occurs in the cleft between the catalytic and coenzyme-binding domains at the active site, and coenzyme binding induces a conformational closing of this cleft. Coenzyme binding typically precedes and contributes to substrate binding. Length = 303

>gnl|CDD|182701 PRK10754, PRK10754, quinone oxidoreductase, NADPH-dependent; Provisional

 Score = 49.0 bits (117), Expect = 2e-06
 Identities = 66/245 (26%), Positives = 97/245 (39%), Gaps = 43/245 (17%)

Query: 25  GVNTLKIQPFELPSLGPYDVLVRMKAVGICGSDVHYLKT-LRCADFVVKE-PMVIGHECA 82
           G   L+   F        +V V  KA+GI     +Y+ T +R   +     P  +G E A
Sbjct: 12  GPEVLQAVEFTPADPAENEVQVENKAIGI-----NYIDTYIRSGLYPPPSLPSGLGTEAA 66

Query: 83  GVIEKVGSEVKTLVPGDRVALEPGISCWRCDHCKGGRYNLCPEMKFFATPPVHGSLANQV 142
           GV+ KVGS VK +  GDRV                  Y         A   VH   A++ 
Sbjct: 67  GVVSKVGSGVKHIKVGDRVV-----------------YAQSA---LGAYSSVHNVPADKA 106

Query: 143 VHPADLCFKLPDNVSLEEGAMC--EPLSVGLHACRRANIGP-ETNVLIMGAGPIGLVTML 199
                    LPD +S E+ A    + L+V     +   I P E  +    AG +GL+   
Sbjct: 107 A-------ILPDAISFEQAAASFLKGLTVYYLLRKTYEIKPDEQFLFHAAAGGVGLIACQ 159

Query: 200 GAPRAFGAPRIVIVDVDDYRLSVAKEIGADNIVKVSTNLQDIAEEVEKIQKAMGTGIDVS 259
            A +A GA  I  V     +   AK+ GA  ++      ++I E V++I    G  + V 
Sbjct: 160 WA-KALGAKLIGTVGSAQ-KAQRAKKAGAWQVINYRE--ENIVERVKEITG--GKKVRVV 213

Query: 260 FDCAG 264
           +D  G
Sbjct: 214 YDSVG 218

Length = 327

>gnl|CDD|222256 pfam13602, ADH_zinc_N_2, Zinc-binding dehydrogenase

 Score = 44.7 bits (106), Expect = 6e-06
 Identities = 33/139 (23%), Positives = 49/139 (35%), Gaps = 15/139 (10%)

Query: 226 IGADNIVKVSTNLQDIAEEVEKIQKAMGTGIDVSFDCAGLNKTMSTALGATCAGGKVCLV 285
           +GAD ++  +T  +D  E         G G+DV  D  G    +   L     G  V + 
Sbjct: 1   LGADEVIDYTT--EDFEEATA------GEGVDVVLDTVGGETLLRALLALKPGGRLVSIG 52

Query: 286 GMGHHEMTVPL-TPAAVREVDVVGVFRYKNTWPL--CLELLRSGKIDVKPLVTHRFGFSQ 342
           G               VR V +  V   +    L    EL+ +GK+  +P++   F    
Sbjct: 53  GPDLLLSVAAKAGGRGVRGVFLFPVSPGEAGADLAELAELVEAGKL--RPVIDRVFPLE- 109

Query: 343 KEVEEAFETSARGGTAIKV 361
            E  EA      G    KV
Sbjct: 110 -EAAEAHRYLESGRARGKV 127

Length = 129

>gnl|CDD|176209 cd08247, AST1_like, AST1 is a cytoplasmic protein associated with the periplasmic membrane in yeast

 Score = 46.9 bits (112), Expect = 8e-06
 Identities = 64/261 (24%), Positives = 102/261 (39%), Gaps = 64/261 (24%)

Query: 29  LKIQPFELP---SLGPYDVLVRMKAVGICGSDVHYLKTLRCADFVVK-EPMVIGHECAGV 84
           L I   +LP        +++V++ A  +   D   LK      F  K +   +G + +GV
Sbjct: 13  LTITTIKLPLPNCYKDNEIVVKVHAAALNPVD---LKLYNSYTFHFKVKEKGLGRDYSGV 69

Query: 85  IEKVGSEVKTLVP-GDRVALEPGISCWRCDHCKGGRYNLCPEMKFFATPPVHGSLANQ-V 142
           I KVGS V +    GD V    GI      H  GG+                G+L+   +
Sbjct: 70  IVKVGSNVASEWKVGDEVC---GIY----PHPYGGQ----------------GTLSQYLL 106

Query: 143 VHPADLCFKL---PDNVSLEEGAMCEPLSVG-----LHACRRANIGPETNVLIMGAGPIG 194
           V P      +   P+N+SLEE A   PL +G     L    +  +GP++ VL++G     
Sbjct: 107 VDPKKDKKSITRKPENISLEEAA-AWPLVLGTAYQILEDLGQ-KLGPDSKVLVLGGS--- 161

Query: 195 LVTMLG------APRAFGAPRIVIVDVDDYRLSVAKEIGADNIV-----KVSTNLQDIAE 243
             T +G      A   +    +V          + K++GAD+ +          L+ + E
Sbjct: 162 --TSVGRFAIQLAKNHYNIGTVVGT-CSSRSAELNKKLGADHFIDYDAHSGVKLLKPVLE 218

Query: 244 EVEKIQKAMGTGIDVSFDCAG 264
            V+   K      D+  DC G
Sbjct: 219 NVKGQGK-----FDLILDCVG 234

This group contains members identified in targeting of yeast membrane proteins ATPase. AST1 is a cytoplasmic protein associated with the periplasmic membrane in yeast, identified as a multicopy suppressor of pma1 mutants which cause temperature sensitive growth arrest due to the inability of ATPase to target to the cell surface. This family is homologous to the medium chain family of dehydrogenases and reductases. Medium chain dehydrogenases/reductase (MDR)/zinc-dependent alcohol dehydrogenase-like family, which contains the zinc-dependent alcohol dehydrogenase (ADH-Zn) and related proteins, is a diverse group of proteins related to the first identified member, class I mammalian ADH. MDRs display a broad range of activities and are distinguished from the smaller short chain dehydrogenases (~ 250 amino acids vs. the ~ 350 amino acids of the MDR). The MDR proteins have 2 domains: a C-terminal NAD(P) binding-Rossmann fold domain of an beta-alpha form and an N-terminal catalytic domain with distant homology to GroES. Length = 352

>gnl|CDD|176212 cd08250, Mgc45594_like, Mgc45594 gene product and other MDR family members

 Score = 45.7 bits (109), Expect = 2e-05
 Identities = 27/76 (35%), Positives = 35/76 (46%), Gaps = 8/76 (10%)

Query: 30  KIQPFELPSLGPYDVLVRMKAVGICGSDVHYLKTLRCA---DFVVKEPMVIGHECAGVIE 86
            I    +P  GP +VLV+ + VGI  SD+++      A   D  VK P   G E  G + 
Sbjct: 19  SIVDVPVPLPGPGEVLVKNRFVGINASDINF-----TAGRYDPGVKPPFDCGFEGVGEVV 73

Query: 87  KVGSEVKTLVPGDRVA 102
            VG  V     GD VA
Sbjct: 74  AVGEGVTDFKVGDAVA 89

Includes Human Mgc45594 gene product of undetermined function. The medium chain dehydrogenases/reductase (MDR)/zinc-dependent alcohol dehydrogenase-like family, which contains the zinc-dependent alcohol dehydrogenase (ADH-Zn) and related proteins, is a diverse group of proteins related to the first identified member, class I mammalian ADH. MDRs display a broad range of activities and are distinguished from the smaller short chain dehydrogenases (~ 250 amino acids vs. the ~ 350 amino acids of the MDR). The MDR proteins have 2 domains: a C-terminal NAD(P) binding-Rossmann fold domain of a beta-alpha form and an N-terminal catalytic domain with distant homology to GroES. Length = 329

>gnl|CDD|130269 TIGR01202, bchC, 2-desacetyl-2-hydroxyethyl bacteriochlorophyllide A dehydrogenase

 Score = 44.1 bits (104), Expect = 6e-05
 Identities = 74/342 (21%), Positives = 127/342 (37%), Gaps = 64/342 (18%)

Query: 23  LLGVNTLKIQPFELPSLGPYDVLVRMKAVGI-CGSDVHYLKTLRCADFVVKEPMVIGHEC 81
           L G N ++++   L    P D++V +   GI  G++  +   L      +  P+V G+E 
Sbjct: 7   LSGPNQIELREVTLTPPSPGDLVVEIWYSGISTGTEKLFWNGLMPPFPGMGYPLVPGYES 66

Query: 82  AGVIEKVGSEVKTLVPGDRVALEPGISCWRCDHCKGGRYNLCPEMKFFATPPVHGSLANQ 141
            G + + G +     PGDRV + PG +C                  +     + G  + +
Sbjct: 67  VGRVVEAGPDTGFR-PGDRVFV-PGSNC------------------YEDVRGLFGGASKR 106

Query: 142 VVHPADLCFKLPDNVSLEEGAMCEPLSVGLHACRRANIGPETNV---LIMGAGPIG-LVT 197
           +V PA    +L   +    G     L++   A R A  G E  V   LI+G G +G L+ 
Sbjct: 107 LVTPASRVCRLDPAL----GPQGALLALAATA-RHAVAGAEVKVLPDLIVGHGTLGRLLA 161

Query: 198 MLGAPRAFGAPRIVIVDVDDYRLSVAKEIGADNIVKVSTNLQDIAEEVEKI--QKAMGTG 255
            L   +A G     + + +  R                    D A   E +  +K     
Sbjct: 162 RLT--KAAGGSPPAVWETNPRRR-------------------DGATGYEVLDPEKDPRRD 200

Query: 256 IDVSFDCAGLNKTMSTALGATCAGGKVCLVGMGHHEMTVPLTPAAVREVDVVGVFRYKNT 315
               +D +G    + T +     GG++ L G     +     PA ++E       R    
Sbjct: 201 YRAIYDASGDPSLIDTLVRRLAKGGEIVLAGFYTEPVNFDFVPAFMKEAR----LRIAAE 256

Query: 316 WP-----LCLELLRSGKIDVKPLVTHRFGFSQKEVEEAFETS 352
           W         EL+ SG + +  L+TH+      +  EA+ T+
Sbjct: 257 WQPGDLHAVRELIESGALSLDGLITHQ--RPASDAAEAYMTA 296

[Biosynthesis of cofactors, prosthetic groups, and carriers, Chlorophyll and bacteriochlorphyll]. Length = 308

>gnl|CDD|176235 cd08274, MDR9, Medium chain dehydrogenases/reductase (MDR)/zinc-dependent alcohol dehydrogenase-like family

 Score = 41.5 bits (98), Expect = 4e-04
 Identities = 58/270 (21%), Positives = 95/270 (35%), Gaps = 40/270 (14%)

Query: 37  PSLGPYDVLVRMKAVGI-----------CGSDVHYLKTLRCADFV------VKEPMVIGH 79
           P+  P +VL+R+ A G+             ++V        A         +  P + G 
Sbjct: 24  PTPAPGEVLIRVGACGVNNTDINTREGWYSTEVDGATDSTGAGEAGWWGGTLSFPRIQGA 83

Query: 80  ECAGVIEKVGSEVKTLVPGDRVALEPGISCWRCDHCKGGRYNLCPEMKFFATPPVHGSLA 139
           +  G +  VG  V T   G+RV ++P I             +   ++ +  +    G  A
Sbjct: 84  DIVGRVVAVGEGVDTARIGERVLVDPSIR-------DPPEDDPA-DIDYIGS-ERDGGFA 134

Query: 140 NQVVHPADLCFKLPDNVSLEE-GAMCEPLSVGLHACRRANIGPETNVLIMGA-GPIGLVT 197
              V PA+  + +   +S  E        S   +   RA +G    VL+ GA G +G   
Sbjct: 135 EYTVVPAENAYPVNSPLSDVELATFPCSYSTAENMLERAGVGAGETVLVTGASGGVGSAL 194

Query: 198 M-LGAPRAFGAPRIVIVDVDDYRLSVAKEIGADNIVKVSTNLQDIAEEVEKIQKAMGTGI 256
           + L   R  GA  IVI      +    + +GAD ++     L      +   +   G  +
Sbjct: 195 VQLAKRR--GA--IVIAVAGAAKEEAVRALGADTVILRDAPL------LADAKALGGEPV 244

Query: 257 DVSFDCAGLNKTMSTALGATCAGGKVCLVG 286
           DV  D  G        L     GG+    G
Sbjct: 245 DVVADVVG-GPLFPDLLRLLRPGGRYVTAG 273

This group is a member of the medium chain dehydrogenases/reductase (MDR)/zinc-dependent alcohol dehydrogenase-like family, but lacks the zinc-binding sites of the zinc-dependent alcohol dehydrogenases. The medium chain dehydrogenases/reductase (MDR)/zinc-dependent alcohol dehydrogenase-like family, which contains the zinc-dependent alcohol dehydrogenase (ADH-Zn) and related proteins, is a diverse group of proteins related to the first identified member, class I mammalian ADH. MDRs display a broad range of activities and are distinguished from the smaller short chain dehydrogenases (~ 250 amino acids vs. the ~ 350 amino acids of the MDR). The MDR proteins have 2 domains: a C-terminal NAD(P)-binding Rossmann fold domain of a beta-alpha form and an N-terminal catalytic domain with distant homology to GroES. The MDR group contains a host of activities, including the founding alcohol dehydrogenase (ADH), quinone reductase, sorbitol dehydrogenase, formaldehyde dehydrogenase, butanediol DH, ketose reductase, cinnamyl reductase, and numerous others. The zinc-dependent alcohol dehydrogenases (ADHs) catalyze the NAD(P)(H)-dependent interconversion of alcohols to aldehydes or ketones. Active site zinc has a catalytic role, while structural zinc aids in stability. ADH-like proteins typically form dimers (typically higher plants, mammals) or tetramers (yeast, bacteria), and generally have 2 tightly bound zinc atoms per subunit. The active site zinc is coordinated by a histidine, two cysteines, and a water molecule. The second zinc seems to play a structural role, affects subunit interactions, and is typically coordinated by 4 cysteines. Length = 350

>gnl|CDD|234024 TIGR02817, adh_fam_1, zinc-binding alcohol dehydrogenase family protein

 Score = 40.5 bits (95), Expect = 9e-04
 Identities = 22/65 (33%), Positives = 31/65 (47%), Gaps = 3/65 (4%)

Query: 37  PSLGPYDVLVRMKAVGICGSDVHYLKTLRCADFVVKEPMVIGHECAGVIEKVGSEVKTLV 96
           P  G  D+LV +KA+ +   D    K          +P ++G + AGV+  VG EV    
Sbjct: 25  PKPGGRDLLVEVKAISVNPVDT---KVRARMAPEAGQPKILGWDAAGVVVAVGDEVTLFK 81

Query: 97  PGDRV 101
           PGD V
Sbjct: 82  PGDEV 86

Members of this model form a distinct subset of the larger family of oxidoreductases that includes zinc-binding alcohol dehydrogenases and NADPH:quinone reductases (pfam00107). While some current members of this family carry designations as putative alginate lyase, it seems no sequence with a direct characterization as such is detected by this model [Energy metabolism, Fermentation]. Length = 336

Conserved Domains Detected by HHsearch

Original result of HHsearch against CDD database

ID	Length	Definition	Probability
Query	365
KOG0024	354	consensus Sorbitol dehydrogenase [Secondary metabo	100.0
COG1064	339	AdhP Zn-dependent alcohol dehydrogenases [General	100.0
PRK09880	343	L-idonate 5-dehydrogenase; Provisional	100.0
COG1062	366	AdhC Zn-dependent alcohol dehydrogenases, class II	100.0
cd08239	339	THR_DH_like L-threonine dehydrogenase (TDH)-like.	100.0
PLN02702	364	L-idonate 5-dehydrogenase	100.0
KOG0023	360	consensus Alcohol dehydrogenase, class V [Secondar	100.0
cd08281	371	liver_ADH_like1 Zinc-dependent alcohol dehydrogena	100.0
PLN02740	381	Alcohol dehydrogenase-like	100.0
PLN02827	378	Alcohol dehydrogenase-like	100.0
COG1063	350	Tdh Threonine dehydrogenase and related Zn-depende	100.0
KOG0022	375	consensus Alcohol dehydrogenase, class III [Second	100.0
TIGR03451	358	mycoS_dep_FDH mycothiol-dependent formaldehyde deh	100.0
PRK10309	347	galactitol-1-phosphate dehydrogenase; Provisional	100.0
TIGR02819	393	fdhA_non_GSH formaldehyde dehydrogenase, glutathio	100.0
TIGR02818	368	adh_III_F_hyde S-(hydroxymethyl)glutathione dehydr	100.0
cd08301	369	alcohol_DH_plants Plant alcohol dehydrogenase. NAD	100.0
COG0604	326	Qor NADPH:quinone reductase and related Zn-depende	100.0
PLN02586	360	probable cinnamyl alcohol dehydrogenase	100.0
cd08300	368	alcohol_DH_class_III class III alcohol dehydrogena	100.0
cd08233	351	butanediol_DH_like (2R,3R)-2,3-butanediol dehydrog	100.0
TIGR03201	349	dearomat_had 6-hydroxycyclohex-1-ene-1-carbonyl-Co	100.0
cd08230	355	glucose_DH Glucose dehydrogenase. Glucose dehydrog	100.0
cd08277	365	liver_alcohol_DH_like Liver alcohol dehydrogenase.	100.0
PLN02178	375	cinnamyl-alcohol dehydrogenase	100.0
TIGR02822	329	adh_fam_2 zinc-binding alcohol dehydrogenase famil	100.0
cd08237	341	ribitol-5-phosphate_DH ribitol-5-phosphate dehydro	100.0
KOG1197	336	consensus Predicted quinone oxidoreductase [Energy	100.0
PLN02514	357	cinnamyl-alcohol dehydrogenase	100.0
PRK10083	339	putative oxidoreductase; Provisional	100.0
cd08231	361	MDR_TM0436_like Hypothetical enzyme TM0436 resembl	100.0
TIGR01202	308	bchC 2-desacetyl-2-hydroxyethyl bacteriochlorophyl	100.0
cd08238	410	sorbose_phosphate_red L-sorbose-1-phosphate reduct	100.0
cd08285	351	NADP_ADH NADP(H)-dependent alcohol dehydrogenases.	100.0
cd08256	350	Zn_ADH2 Alcohol dehydrogenases of the MDR family.	100.0
cd05285	343	sorbitol_DH Sorbitol dehydrogenase. Sorbitol and a	100.0
cd08299	373	alcohol_DH_class_I_II_IV class I, II, IV alcohol d	100.0
cd08296	333	CAD_like Cinnamyl alcohol dehydrogenases (CAD). Ci	100.0
cd08283	386	FDH_like_1 Glutathione-dependent formaldehyde dehy	100.0
cd05284	340	arabinose_DH_like D-arabinose dehydrogenase. This	100.0
PRK05396	341	tdh L-threonine 3-dehydrogenase; Validated	100.0
cd05279	365	Zn_ADH1 Liver alcohol dehydrogenase and related zi	100.0
cd08246	393	crotonyl_coA_red crotonyl-CoA reductase. Crotonyl-	100.0
cd08232	339	idonate-5-DH L-idonate 5-dehydrogenase. L-idonate	100.0
cd08284	344	FDH_like_2 Glutathione-dependent formaldehyde dehy	100.0
cd05278	347	FDH_like Formaldehyde dehydrogenases. Formaldehyde	100.0
cd08286	345	FDH_like_ADH2 formaldehyde dehydrogenase (FDH)-lik	100.0
cd08278	365	benzyl_alcohol_DH Benzyl alcohol dehydrogenase. Be	100.0
cd08242	319	MDR_like Medium chain dehydrogenases/reductase (MD	100.0
cd08262	341	Zn_ADH8 Alcohol dehydrogenases of the MDR family.	100.0
cd08265	384	Zn_ADH3 Alcohol dehydrogenases of the MDR family.	100.0
cd08235	343	iditol_2_DH_like L-iditol 2-dehydrogenase. Putativ	100.0
cd08240	350	6_hydroxyhexanoate_dh_like 6-hydroxyhexanoate dehy	100.0
cd08279	363	Zn_ADH_class_III Class III alcohol dehydrogenase.	100.0
cd08261	337	Zn_ADH7 Alcohol dehydrogenases of the MDR family.	100.0
cd08287	345	FDH_like_ADH3 formaldehyde dehydrogenase (FDH)-lik	100.0
cd08263	367	Zn_ADH10 Alcohol dehydrogenases of the MDR family.	100.0
TIGR01751	398	crot-CoA-red crotonyl-CoA reductase. The enzyme mo	100.0
cd08260	345	Zn_ADH6 Alcohol dehydrogenases of the MDR family.	100.0
cd08282	375	PFDH_like Pseudomonas putida aldehyde-dismutating	100.0
cd08236	343	sugar_DH NAD(P)-dependent sugar dehydrogenases. Th	100.0
cd05283	337	CAD1 Cinnamyl alcohol dehydrogenases (CAD). Cinnam	100.0
cd05281	341	TDH Threonine dehydrogenase. L-threonine dehydroge	100.0
cd08291	324	ETR_like_1 2-enoyl thioester reductase (ETR) like	100.0
cd08234	334	threonine_DH_like L-threonine dehydrogenase. L-thr	100.0
TIGR00692	340	tdh L-threonine 3-dehydrogenase. E. coli His-90 mo	100.0
PRK09422	338	ethanol-active dehydrogenase/acetaldehyde-active r	100.0
cd08297	341	CAD3 Cinnamyl alcohol dehydrogenases (CAD). These	100.0
PRK13771	334	putative alcohol dehydrogenase; Provisional	100.0
cd08254	338	hydroxyacyl_CoA_DH 6-hydroxycyclohex-1-ene-1-carbo	100.0
TIGR03366	280	HpnZ_proposed putative phosphonate catabolism asso	100.0
PLN03154	348	putative allyl alcohol dehydrogenase; Provisional	100.0
cd08259	332	Zn_ADH5 Alcohol dehydrogenases of the MDR family.	100.0
cd08298	329	CAD2 Cinnamyl alcohol dehydrogenases (CAD). These	100.0
KOG0025	354	consensus Zn2+-binding dehydrogenase (nuclear rece	100.0
cd08266	342	Zn_ADH_like1 Alcohol dehydrogenases of the MDR fam	100.0
cd08293	345	PTGR2 Prostaglandin reductase. Prostaglandins and	100.0
cd08292	324	ETR_like_2 2-enoyl thioester reductase (ETR) like	100.0
cd08295	338	double_bond_reductase_like Arabidopsis alkenal dou	100.0
TIGR02825	325	B4_12hDH leukotriene B4 12-hydroxydehydrogenase/15	100.0
cd08294	329	leukotriene_B4_DH_like 13-PGR is a bifunctional en	100.0
cd08264	325	Zn_ADH_like2 Alcohol dehydrogenases of the MDR fam	100.0
cd08274	350	MDR9 Medium chain dehydrogenases/reductase (MDR)/z	100.0
cd08245	330	CAD Cinnamyl alcohol dehydrogenases (CAD) and rela	100.0
cd08258	306	Zn_ADH4 Alcohol dehydrogenases of the MDR family.	100.0
cd08244	324	MDR_enoyl_red Possible enoyl reductase. Member ide	100.0
cd08269	312	Zn_ADH9 Alcohol dehydrogenases of the MDR family.	100.0
TIGR02817	336	adh_fam_1 zinc-binding alcohol dehydrogenase famil	100.0
cd08290	341	ETR 2-enoyl thioester reductase (ETR). 2-enoyl thi	100.0
PTZ00354	334	alcohol dehydrogenase; Provisional	100.0
cd08276	336	MDR7 Medium chain dehydrogenases/reductase (MDR)/z	100.0
cd08270	305	MDR4 Medium chain dehydrogenases/reductase (MDR)/z	100.0
PRK10754	327	quinone oxidoreductase, NADPH-dependent; Provision	100.0
KOG1198	347	consensus Zinc-binding oxidoreductase [Energy prod	100.0
COG2130	340	Putative NADP-dependent oxidoreductases [General f	100.0
cd08250	329	Mgc45594_like Mgc45594 gene product and other MDR	100.0
cd08249	339	enoyl_reductase_like enoyl_reductase_like. Member	100.0
cd05282	323	ETR_like 2-enoyl thioester reductase-like. 2-enoyl	100.0
cd05280	325	MDR_yhdh_yhfp Yhdh and yhfp-like putative quinone	100.0
cd08289	326	MDR_yhfp_like Yhfp putative quinone oxidoreductase	100.0
TIGR02823	323	oxido_YhdH putative quinone oxidoreductase, YhdH/Y	100.0
cd08243	320	quinone_oxidoreductase_like_1 Quinone oxidoreducta	100.0
cd08253	325	zeta_crystallin Zeta-crystallin with NADP-dependen	100.0
cd08252	336	AL_MDR Arginate lyase and other MDR family members	100.0
cd08248	350	RTN4I1 Human Reticulon 4 Interacting Protein 1. Hu	100.0
cd05276	323	p53_inducible_oxidoreductase PIG3 p53-inducible qu	100.0
cd08272	326	MDR6 Medium chain dehydrogenases/reductase (MDR)/z	100.0
cd08288	324	MDR_yhdh Yhdh putative quinone oxidoreductases. Yh	100.0
cd08247	352	AST1_like AST1 is a cytoplasmic protein associated	100.0
cd05288	329	PGDH Prostaglandin dehydrogenases. Prostaglandins	100.0
cd08271	325	MDR5 Medium chain dehydrogenases/reductase (MDR)/z	100.0
cd05188	271	MDR Medium chain reductase/dehydrogenase (MDR)/zin	100.0
cd05286	320	QOR2 Quinone oxidoreductase (QOR). Quinone oxidore	100.0
cd08273	331	MDR8 Medium chain dehydrogenases/reductase (MDR)/z	100.0
cd08251	303	polyketide_synthase polyketide synthase. Polyketid	100.0
TIGR02824	325	quinone_pig3 putative NAD(P)H quinone oxidoreducta	100.0
cd08268	328	MDR2 Medium chain dehydrogenases/reductase (MDR)/z	100.0
cd08241	323	QOR1 Quinone oxidoreductase (QOR). QOR catalyzes t	99.98
cd05289	309	MDR_like_2 alcohol dehydrogenase and quinone reduc	99.98
cd08267	319	MDR1 Medium chain dehydrogenases/reductase (MDR)/z	99.98
cd08275	337	MDR3 Medium chain dehydrogenases/reductase (MDR)/z	99.97
cd05195	293	enoyl_red enoyl reductase of polyketide synthase.	99.97
cd08255	277	2-desacetyl-2-hydroxyethyl_bacteriochlorophyllide_	99.96
smart00829	288	PKS_ER Enoylreductase. Enoylreductase in Polyketid	99.96
KOG1202	2376	consensus Animal-type fatty acid synthase and rela	99.95
KOG1196	343	consensus Predicted NAD-dependent oxidoreductase [	99.94
PF08240	109	ADH_N: Alcohol dehydrogenase GroES-like domain; In	99.9
PF00107	130	ADH_zinc_N: Zinc-binding dehydrogenase; InterPro:	99.68
cd00401	413	AdoHcyase S-adenosyl-L-homocysteine hydrolase (Ado	99.38
PRK09424	509	pntA NAD(P) transhydrogenase subunit alpha; Provis	99.33
PF13602	127	ADH_zinc_N_2: Zinc-binding dehydrogenase; PDB: 3TQ	99.27
PRK11873	272	arsM arsenite S-adenosylmethyltransferase; Reviewe	98.45
TIGR00561	511	pntA NAD(P) transhydrogenase, alpha subunit. In so	98.42
PF11017	314	DUF2855: Protein of unknown function (DUF2855); In	98.33
cd05213	311	NAD_bind_Glutamyl_tRNA_reduct NADP-binding domain	98.22
PRK00517	250	prmA ribosomal protein L11 methyltransferase; Revi	98.21
PRK08306	296	dipicolinate synthase subunit A; Reviewed	98.12
PRK05476	425	S-adenosyl-L-homocysteine hydrolase; Provisional	98.1
TIGR01035	417	hemA glutamyl-tRNA reductase. This enzyme, togethe	98.09
TIGR00936	406	ahcY adenosylhomocysteinase. This enzyme hydrolyze	97.83
COG2518	209	Pcm Protein-L-isoaspartate carboxylmethyltransfera	97.78
PRK00045	423	hemA glutamyl-tRNA reductase; Reviewed	97.75
PLN02494	477	adenosylhomocysteinase	97.64
PRK12771	564	putative glutamate synthase (NADPH) small subunit;	97.5
PRK08324	681	short chain dehydrogenase; Validated	97.43
PRK00377	198	cbiT cobalt-precorrin-6Y C(15)-methyltransferase;	97.42
TIGR00518	370	alaDH alanine dehydrogenase. The family of known L	97.41
COG0300	265	DltE Short-chain dehydrogenases of various substra	97.38
TIGR02853	287	spore_dpaA dipicolinic acid synthetase, A subunit.	97.32
PF01488	135	Shikimate_DH: Shikimate / quinate 5-dehydrogenase;	97.3
COG2242	187	CobL Precorrin-6B methylase 2 [Coenzyme metabolism	97.29
PTZ00075	476	Adenosylhomocysteinase; Provisional	97.2
TIGR00406	288	prmA ribosomal protein L11 methyltransferase. Ribo	97.17
PRK13943	322	protein-L-isoaspartate O-methyltransferase; Provis	97.14
PRK05993	277	short chain dehydrogenase; Provisional	97.1
COG2264	300	PrmA Ribosomal protein L11 methylase [Translation,	97.08
COG4221	246	Short-chain alcohol dehydrogenase of unknown speci	97.07
PRK05786	238	fabG 3-ketoacyl-(acyl-carrier-protein) reductase;	97.05
COG2230	283	Cfa Cyclopropane fatty acid synthase and related m	96.94
TIGR02469	124	CbiT precorrin-6Y C5,15-methyltransferase (decarbo	96.92
PF01135	209	PCMT: Protein-L-isoaspartate(D-aspartate) O-methyl	96.84
PRK12742	237	oxidoreductase; Provisional	96.79
PRK13942	212	protein-L-isoaspartate O-methyltransferase; Provis	96.76
COG3967	245	DltE Short-chain dehydrogenase involved in D-alani	96.76
PRK14967	223	putative methyltransferase; Provisional	96.71
KOG1209	289	consensus 1-Acyl dihydroxyacetone phosphate reduct	96.71
PF12847	112	Methyltransf_18: Methyltransferase domain; PDB: 3G	96.67
PRK08017	256	oxidoreductase; Provisional	96.66
PRK06182	273	short chain dehydrogenase; Validated	96.65
PF06325	295	PrmA: Ribosomal protein L11 methyltransferase (Prm	96.64
PRK05693	274	short chain dehydrogenase; Provisional	96.6
TIGR00438	188	rrmJ cell division protein FtsJ.	96.58
PRK08618	325	ornithine cyclodeaminase; Validated	96.53
PRK11705	383	cyclopropane fatty acyl phospholipid synthase; Pro	96.53
TIGR00080	215	pimt protein-L-isoaspartate(D-aspartate) O-methylt	96.52
KOG1205	282	consensus Predicted dehydrogenase [Secondary metab	96.51
PRK13944	205	protein-L-isoaspartate O-methyltransferase; Provis	96.46
PF02353	273	CMAS: Mycolic acid cyclopropane synthetase; InterP	96.43
PRK06139	330	short chain dehydrogenase; Provisional	96.36
COG1748	389	LYS9 Saccharopine dehydrogenase and related protei	96.35
COG2227	243	UbiG 2-polyprenyl-3-methyl-5-hydroxy-6-metoxy-1,4-	96.35
PRK08261	450	fabG 3-ketoacyl-(acyl-carrier-protein) reductase;	96.31
PRK06057	255	short chain dehydrogenase; Provisional	96.25
PF03435	386	Saccharop_dh: Saccharopine dehydrogenase ; InterPr	96.24
PRK07060	245	short chain dehydrogenase; Provisional	96.22
PRK08177	225	short chain dehydrogenase; Provisional	96.19
PF13460	183	NAD_binding_10: NADH(P)-binding ; PDB: 3OH8_A 3E8X	96.18
TIGR02356	202	adenyl_thiF thiazole biosynthesis adenylyltransfer	96.16
PF00106	167	adh_short: short chain dehydrogenase alcohol dehyd	96.12
PRK13940	414	glutamyl-tRNA reductase; Provisional	96.07
PRK06949	258	short chain dehydrogenase; Provisional	96.07
PLN03209	576	translocon at the inner envelope of chloroplast su	96.03
PRK07402	196	precorrin-6B methylase; Provisional	96.0
PRK06463	255	fabG 3-ketoacyl-(acyl-carrier-protein) reductase;	95.98
TIGR01470	205	cysG_Nterm siroheme synthase, N-terminal domain. T	95.98
PRK07825	273	short chain dehydrogenase; Provisional	95.97
PRK07814	263	short chain dehydrogenase; Provisional	95.95
PF02826	178	2-Hacid_dh_C: D-isomer specific 2-hydroxyacid dehy	95.94
TIGR01809	282	Shik-DH-AROM shikimate-5-dehydrogenase, fungal ARO	95.94
PRK05866	293	short chain dehydrogenase; Provisional	95.92
KOG1201	300	consensus Hydroxysteroid 17-beta dehydrogenase 11	95.92
PRK07340	304	ornithine cyclodeaminase; Validated	95.91
PRK12828	239	short chain dehydrogenase; Provisional	95.9
PRK07502	307	cyclohexadienyl dehydrogenase; Validated	95.89
PRK07533	258	enoyl-(acyl carrier protein) reductase; Provisiona	95.86
PRK08862	227	short chain dehydrogenase; Provisional	95.84
PRK06200	263	2,3-dihydroxy-2,3-dihydrophenylpropionate dehydrog	95.83
PRK07904	253	short chain dehydrogenase; Provisional	95.81
PRK06196	315	oxidoreductase; Provisional	95.79
PRK06505	271	enoyl-(acyl carrier protein) reductase; Provisiona	95.78
PRK00107	187	gidB 16S rRNA methyltransferase GidB; Reviewed	95.77
TIGR03325	262	BphB_TodD cis-2,3-dihydrobiphenyl-2,3-diol dehydro	95.75
PRK08217	253	fabG 3-ketoacyl-(acyl-carrier-protein) reductase;	95.73
PRK05872	296	short chain dehydrogenase; Provisional	95.7
PRK07677	252	short chain dehydrogenase; Provisional	95.68
PRK06841	255	short chain dehydrogenase; Provisional	95.66
PRK06483	236	dihydromonapterin reductase; Provisional	95.66
cd00755	231	YgdL_like Family of activating enzymes (E1) of ubi	95.63
TIGR01832	248	kduD 2-deoxy-D-gluconate 3-dehydrogenase. This mod	95.62
COG0373	414	HemA Glutamyl-tRNA reductase [Coenzyme metabolism]	95.61
cd01065	155	NAD_bind_Shikimate_DH NAD(P) binding domain of Shi	95.59
PRK08642	253	fabG 3-ketoacyl-(acyl-carrier-protein) reductase;	95.58
PRK07774	250	short chain dehydrogenase; Provisional	95.58
PRK08339	263	short chain dehydrogenase; Provisional	95.57
PRK07806	248	short chain dehydrogenase; Provisional	95.55
PRK07831	262	short chain dehydrogenase; Provisional	95.55
PRK05867	253	short chain dehydrogenase; Provisional	95.54
COG0421	282	SpeE Spermidine synthase [Amino acid transport and	95.53
PRK12829	264	short chain dehydrogenase; Provisional	95.51
PF01262	168	AlaDh_PNT_C: Alanine dehydrogenase/PNT, C-terminal	95.5
PRK00811	283	spermidine synthase; Provisional	95.48
PRK06500	249	short chain dehydrogenase; Provisional	95.46
PRK12549	284	shikimate 5-dehydrogenase; Reviewed	95.46
COG1179	263	Dinucleotide-utilizing enzymes involved in molybdo	95.46
PRK03369	488	murD UDP-N-acetylmuramoyl-L-alanyl-D-glutamate syn	95.45
PRK06718	202	precorrin-2 dehydrogenase; Reviewed	95.45
PRK08628	258	short chain dehydrogenase; Provisional	95.45
PRK06180	277	short chain dehydrogenase; Provisional	95.45
PRK07062	265	short chain dehydrogenase; Provisional	95.44
PRK08589	272	short chain dehydrogenase; Validated	95.44
COG2519	256	GCD14 tRNA(1-methyladenosine) methyltransferase an	95.44
PRK08415	274	enoyl-(acyl carrier protein) reductase; Provisiona	95.43
PF01118	121	Semialdhyde_dh: Semialdehyde dehydrogenase, NAD bi	95.42
PRK09072	263	short chain dehydrogenase; Provisional	95.4
PRK01581	374	speE spermidine synthase; Validated	95.39
PRK04148	134	hypothetical protein; Provisional	95.38
PRK00312	212	pcm protein-L-isoaspartate O-methyltransferase; Re	95.35
PRK12939	250	short chain dehydrogenase; Provisional	95.35
PRK07231	251	fabG 3-ketoacyl-(acyl-carrier-protein) reductase;	95.35
PRK06603	260	enoyl-(acyl carrier protein) reductase; Provisiona	95.34
PRK08317	241	hypothetical protein; Provisional	95.32
PRK06198	260	short chain dehydrogenase; Provisional	95.32
PF00670	162	AdoHcyase_NAD: S-adenosyl-L-homocysteine hydrolase	95.31
PRK07453	322	protochlorophyllide oxidoreductase; Validated	95.28
PRK08267	260	short chain dehydrogenase; Provisional	95.28
cd05311	226	NAD_bind_2_malic_enz NAD(P) binding domain of mali	95.26
PRK08265	261	short chain dehydrogenase; Provisional	95.24
PF01408	120	GFO_IDH_MocA: Oxidoreductase family, NAD-binding R	95.23
TIGR02355	240	moeB molybdopterin synthase sulfurylase MoeB. This	95.19
PRK08644	212	thiamine biosynthesis protein ThiF; Provisional	95.19
PRK05854	313	short chain dehydrogenase; Provisional	95.19
PRK07478	254	short chain dehydrogenase; Provisional	95.17
PRK07688	339	thiamine/molybdopterin biosynthesis ThiF/MoeB-like	95.14
PRK08690	261	enoyl-(acyl carrier protein) reductase; Provisiona	95.14
PRK12475	338	thiamine/molybdopterin biosynthesis MoeB-like prot	95.14
PRK12823	260	benD 1,6-dihydroxycyclohexa-2,4-diene-1-carboxylat	95.13
PRK08703	239	short chain dehydrogenase; Provisional	95.12
PRK06079	252	enoyl-(acyl carrier protein) reductase; Provisiona	95.11
TIGR03840	213	TMPT_Se_Te thiopurine S-methyltransferase, Se/Te d	95.11
PRK08643	256	acetoin reductase; Validated	95.08
COG0031	300	CysK Cysteine synthase [Amino acid transport and m	95.08
PRK08340	259	glucose-1-dehydrogenase; Provisional	95.07
PRK08159	272	enoyl-(acyl carrier protein) reductase; Provisiona	95.07
PRK07523	255	gluconate 5-dehydrogenase; Provisional	95.06
COG3288	356	PntA NAD/NADP transhydrogenase alpha subunit [Ener	95.06
PLN02780	320	ketoreductase/ oxidoreductase	95.06
PRK07024	257	short chain dehydrogenase; Provisional	95.04
PRK13394	262	3-hydroxybutyrate dehydrogenase; Provisional	95.03
TIGR03215	285	ac_ald_DH_ac acetaldehyde dehydrogenase (acetylati	95.02
PRK06719	157	precorrin-2 dehydrogenase; Validated	95.02
cd01487	174	E1_ThiF_like E1_ThiF_like. Member of superfamily o	95.01
PRK08300	302	acetaldehyde dehydrogenase; Validated	95.0
PF01113	124	DapB_N: Dihydrodipicolinate reductase, N-terminus;	95.0
TIGR00446	264	nop2p NOL1/NOP2/sun family putative RNA methylase.	94.99
PRK05717	255	oxidoreductase; Validated	94.96
PRK06194	287	hypothetical protein; Provisional	94.95
PRK06128	300	oxidoreductase; Provisional	94.95
PRK06172	253	short chain dehydrogenase; Provisional	94.95
PRK07109	334	short chain dehydrogenase; Provisional	94.94
cd01483	143	E1_enzyme_family Superfamily of activating enzymes	94.92
PRK06179	270	short chain dehydrogenase; Provisional	94.92
PRK07326	237	short chain dehydrogenase; Provisional	94.9
PF13241	103	NAD_binding_7: Putative NAD(P)-binding; PDB: 3DFZ_	94.9
PLN02366	308	spermidine synthase	94.9
PRK07063	260	short chain dehydrogenase; Provisional	94.89
PRK07984	262	enoyl-(acyl carrier protein) reductase; Provisiona	94.89
PRK12481	251	2-deoxy-D-gluconate 3-dehydrogenase; Provisional	94.89
PRK12384	259	sorbitol-6-phosphate dehydrogenase; Provisional	94.88
PRK07035	252	short chain dehydrogenase; Provisional	94.88
PF00899	135	ThiF: ThiF family; InterPro: IPR000594 Ubiquitin-a	94.88
PRK08226	263	short chain dehydrogenase; Provisional	94.86
PRK05690	245	molybdopterin biosynthesis protein MoeB; Provision	94.86
PRK06953	222	short chain dehydrogenase; Provisional	94.84
KOG1200	256	consensus Mitochondrial/plastidial beta-ketoacyl-A	94.84
PRK07454	241	short chain dehydrogenase; Provisional	94.83
PRK08264	238	short chain dehydrogenase; Validated	94.83
PLN02253	280	xanthoxin dehydrogenase	94.82
PRK06935	258	2-deoxy-D-gluconate 3-dehydrogenase; Provisional	94.8
PRK04266	226	fibrillarin; Provisional	94.8
PLN03075	296	nicotianamine synthase; Provisional	94.8
TIGR00417	270	speE spermidine synthase. the SpeE subunit of sper	94.79
PLN02819	1042	lysine-ketoglutarate reductase/saccharopine dehydr	94.78
PRK05875	276	short chain dehydrogenase; Provisional	94.78
PRK06138	252	short chain dehydrogenase; Provisional	94.78
PRK08277	278	D-mannonate oxidoreductase; Provisional	94.77
PRK07576	264	short chain dehydrogenase; Provisional	94.75
TIGR02354	200	thiF_fam2 thiamine biosynthesis protein ThiF, fami	94.74
PRK08063	250	enoyl-(acyl carrier protein) reductase; Provisiona	94.72
TIGR00138	181	gidB 16S rRNA methyltransferase GidB. GidB (glucos	94.72
COG2226	238	UbiE Methylase involved in ubiquinone/menaquinone	94.71
KOG1252	362	consensus Cystathionine beta-synthase and related	94.71
PRK15116	268	sulfur acceptor protein CsdL; Provisional	94.7
PRK04457	262	spermidine synthase; Provisional	94.7
PRK12743	256	oxidoreductase; Provisional	94.68
PRK08213	259	gluconate 5-dehydrogenase; Provisional	94.66
PRK07890	258	short chain dehydrogenase; Provisional	94.65
PRK06482	276	short chain dehydrogenase; Provisional	94.63
PRK05562	223	precorrin-2 dehydrogenase; Provisional	94.6
PRK05597	355	molybdopterin biosynthesis protein MoeB; Validated	94.59
PRK06141	314	ornithine cyclodeaminase; Validated	94.58
TIGR02992	326	ectoine_eutC ectoine utilization protein EutC. Mem	94.55
cd00757	228	ThiF_MoeB_HesA_family ThiF_MoeB_HesA. Family of E1	94.55
PRK06125	259	short chain dehydrogenase; Provisional	94.54
TIGR03206	250	benzo_BadH 2-hydroxycyclohexanecarboxyl-CoA dehydr	94.53
PRK08328	231	hypothetical protein; Provisional	94.52
PRK12429	258	3-hydroxybutyrate dehydrogenase; Provisional	94.52
PRK07856	252	short chain dehydrogenase; Provisional	94.52
PRK05876	275	short chain dehydrogenase; Provisional	94.51
PLN02233	261	ubiquinone biosynthesis methyltransferase	94.51
PRK08416	260	7-alpha-hydroxysteroid dehydrogenase; Provisional	94.5
PF13823	23	ADH_N_assoc: Alcohol dehydrogenase GroES-associate	94.5
PRK08251	248	short chain dehydrogenase; Provisional	94.49
PRK06197	306	short chain dehydrogenase; Provisional	94.48
PRK06114	254	short chain dehydrogenase; Provisional	94.47
PRK09242	257	tropinone reductase; Provisional	94.46
PLN03139	386	formate dehydrogenase; Provisional	94.45
PRK06181	263	short chain dehydrogenase; Provisional	94.43
PRK05653	246	fabG 3-ketoacyl-(acyl-carrier-protein) reductase;	94.42
PRK12749	288	quinate/shikimate dehydrogenase; Reviewed	94.41
PRK06398	258	aldose dehydrogenase; Validated	94.39
PRK14103	255	trans-aconitate 2-methyltransferase; Provisional	94.36
PF01209	233	Ubie_methyltran: ubiE/COQ5 methyltransferase famil	94.35
PF08704	247	GCD14: tRNA methyltransferase complex GCD14 subuni	94.35
PRK08993	253	2-deoxy-D-gluconate 3-dehydrogenase; Validated	94.35
PRK05884	223	short chain dehydrogenase; Provisional	94.34
PRK07832	272	short chain dehydrogenase; Provisional	94.33
PRK01683	258	trans-aconitate 2-methyltransferase; Provisional	94.33
PRK09186	256	flagellin modification protein A; Provisional	94.32
PLN02823	336	spermine synthase	94.32
PRK12936	245	3-ketoacyl-(acyl-carrier-protein) reductase NodG;	94.31
PRK12747	252	short chain dehydrogenase; Provisional	94.31
PRK06914	280	short chain dehydrogenase; Provisional	94.3
COG0686	371	Ald Alanine dehydrogenase [Amino acid transport an	94.29
PRK06720	169	hypothetical protein; Provisional	94.27
PRK12550	272	shikimate 5-dehydrogenase; Reviewed	94.27
PRK10538	248	malonic semialdehyde reductase; Provisional	94.27
PRK08287	187	cobalt-precorrin-6Y C(15)-methyltransferase; Valid	94.26
CHL00194	317	ycf39 Ycf39; Provisional	94.26
PRK12548	289	shikimate 5-dehydrogenase; Provisional	94.22
PRK07067	257	sorbitol dehydrogenase; Provisional	94.21
KOG0725	270	consensus Reductases with broad range of substrate	94.2
PRK06484	520	short chain dehydrogenase; Validated	94.18
PRK06523	260	short chain dehydrogenase; Provisional	94.17
PRK08085	254	gluconate 5-dehydrogenase; Provisional	94.15
TIGR02632	676	RhaD_aldol-ADH rhamnulose-1-phosphate aldolase/alc	94.13
PRK11207	197	tellurite resistance protein TehB; Provisional	94.11
PRK09134	258	short chain dehydrogenase; Provisional	94.11
PRK08263	275	short chain dehydrogenase; Provisional	94.11
PRK07985	294	oxidoreductase; Provisional	94.08
PRK06124	256	gluconate 5-dehydrogenase; Provisional	94.07
PRK12826	251	3-ketoacyl-(acyl-carrier-protein) reductase; Revie	94.07
PRK06113	255	7-alpha-hydroxysteroid dehydrogenase; Validated	94.03
PRK09291	257	short chain dehydrogenase; Provisional	94.0
COG0673	342	MviM Predicted dehydrogenases and related proteins	93.99
PRK12367	245	short chain dehydrogenase; Provisional	93.99
PRK06997	260	enoyl-(acyl carrier protein) reductase; Provisiona	93.98
PRK07577	234	short chain dehydrogenase; Provisional	93.98
PRK07791	286	short chain dehydrogenase; Provisional	93.97
PLN00203	519	glutamyl-tRNA reductase	93.92
PRK09730	247	putative NAD(P)-binding oxidoreductase; Provisiona	93.92
PRK04207	341	glyceraldehyde-3-phosphate dehydrogenase; Provisio	93.9
PRK13303	265	L-aspartate dehydrogenase; Provisional	93.9
PRK07424	406	bifunctional sterol desaturase/short chain dehydro	93.9
TIGR01963	255	PHB_DH 3-hydroxybutyrate dehydrogenase. This model	93.9
PRK06077	252	fabG 3-ketoacyl-(acyl-carrier-protein) reductase;	93.9
PRK07074	257	short chain dehydrogenase; Provisional	93.89
PRK00536	262	speE spermidine synthase; Provisional	93.88
PLN03013	429	cysteine synthase	93.86
TIGR02752	231	MenG_heptapren 2-heptaprenyl-1,4-naphthoquinone me	93.86
TIGR00563	426	rsmB ribosomal RNA small subunit methyltransferase	93.85
PRK08303	305	short chain dehydrogenase; Provisional	93.85
PRK08762	376	molybdopterin biosynthesis protein MoeB; Validated	93.84
PRK08936	261	glucose-1-dehydrogenase; Provisional	93.82
PRK11579	346	putative oxidoreductase; Provisional	93.8
KOG1014	312	consensus 17 beta-hydroxysteroid dehydrogenase typ	93.79
PRK07097	265	gluconate 5-dehydrogenase; Provisional	93.72
PRK12825	249	fabG 3-ketoacyl-(acyl-carrier-protein) reductase;	93.71
PRK06484	520	short chain dehydrogenase; Validated	93.7
PRK12937	245	short chain dehydrogenase; Provisional	93.66
TIGR00715	256	precor6x_red precorrin-6x reductase. This enzyme w	93.66
PRK00121	202	trmB tRNA (guanine-N(7)-)-methyltransferase; Revie	93.64
TIGR02371	325	ala_DH_arch alanine dehydrogenase, Archaeoglobus f	93.63
PF01564	246	Spermine_synth: Spermine/spermidine synthase; Inte	93.63
PF02254	116	TrkA_N: TrkA-N domain; InterPro: IPR003148 The reg	93.63
PRK07574	385	formate dehydrogenase; Provisional	93.63
PRK08594	257	enoyl-(acyl carrier protein) reductase; Provisiona	93.6
cd01078	194	NAD_bind_H4MPT_DH NADP binding domain of methylene	93.6
PRK11188	209	rrmJ 23S rRNA methyltransferase J; Provisional	93.59
PRK03612	521	spermidine synthase; Provisional	93.56
COG4122	219	Predicted O-methyltransferase [General function pr	93.55
PRK06823	315	ornithine cyclodeaminase; Validated	93.54
PRK14982	340	acyl-ACP reductase; Provisional	93.52
PRK05557	248	fabG 3-ketoacyl-(acyl-carrier-protein) reductase;	93.52
COG0169	283	AroE Shikimate 5-dehydrogenase [Amino acid transpo	93.51
TIGR01289	314	LPOR light-dependent protochlorophyllide reductase	93.51
PTZ00098	263	phosphoethanolamine N-methyltransferase; Provision	93.49
PRK13302	271	putative L-aspartate dehydrogenase; Provisional	93.48
PRK12938	246	acetyacetyl-CoA reductase; Provisional	93.47
PRK12746	254	short chain dehydrogenase; Provisional	93.45
PRK14175	286	bifunctional 5,10-methylene-tetrahydrofolate dehyd	93.44
PRK13255	218	thiopurine S-methyltransferase; Reviewed	93.44
PRK07370	258	enoyl-(acyl carrier protein) reductase; Validated	93.43
PRK08261	450	fabG 3-ketoacyl-(acyl-carrier-protein) reductase;	93.42
PRK06947	248	glucose-1-dehydrogenase; Provisional	93.42
PRK06101	240	short chain dehydrogenase; Provisional	93.41
PRK07411	390	hypothetical protein; Validated	93.37
PRK07666	239	fabG 3-ketoacyl-(acyl-carrier-protein) reductase;	93.35
PRK05599	246	hypothetical protein; Provisional	93.3
PRK08291	330	ectoine utilization protein EutC; Validated	93.29
PRK05600	370	thiamine biosynthesis protein ThiF; Validated	93.29
PRK05650	270	short chain dehydrogenase; Provisional	93.25
PRK09135	249	pteridine reductase; Provisional	93.23
PRK13656	398	trans-2-enoyl-CoA reductase; Provisional	93.22
PRK11036	255	putative S-adenosyl-L-methionine-dependent methylt	93.2
PRK14903	431	16S rRNA methyltransferase B; Provisional	93.19
PLN02244	340	tocopherol O-methyltransferase	93.19
PRK07878	392	molybdopterin biosynthesis-like protein MoeZ; Vali	93.19
PRK12935	247	acetoacetyl-CoA reductase; Provisional	93.18
COG1712	255	Predicted dinucleotide-utilizing enzyme [General f	93.14
PRK07775	274	short chain dehydrogenase; Provisional	93.13
PRK06940	275	short chain dehydrogenase; Provisional	93.12
TIGR01318	467	gltD_gamma_fam glutamate synthase small subunit fa	93.08
PRK14901	434	16S rRNA methyltransferase B; Provisional	93.06
PRK08945	247	putative oxoacyl-(acyl carrier protein) reductase;	93.02
PRK12744	257	short chain dehydrogenase; Provisional	93.0
cd01492	197	Aos1_SUMO Ubiquitin activating enzyme (E1) subunit	92.9
TIGR03589	324	PseB UDP-N-acetylglucosamine 4,6-dehydratase. This	92.9
PRK13304	265	L-aspartate dehydrogenase; Reviewed	92.88
TIGR01829	242	AcAcCoA_reduct acetoacetyl-CoA reductase. (R)-3-hy	92.84
TIGR02622	349	CDP_4_6_dhtase CDP-glucose 4,6-dehydratase. Member	92.83
PRK12809	639	putative oxidoreductase Fe-S binding subunit; Revi	92.81
PRK07889	256	enoyl-(acyl carrier protein) reductase; Provisiona	92.8
smart00846	149	Gp_dh_N Glyceraldehyde 3-phosphate dehydrogenase,	92.79
PLN00141	251	Tic62-NAD(P)-related group II protein; Provisional	92.79
COG3963	194	Phospholipid N-methyltransferase [Lipid metabolism	92.78
PRK05855	582	short chain dehydrogenase; Validated	92.78
PRK08220	252	2,3-dihydroxybenzoate-2,3-dehydrogenase; Validated	92.77
PRK06701	290	short chain dehydrogenase; Provisional	92.75
PRK11933	470	yebU rRNA (cytosine-C(5)-)-methyltransferase RsmF;	92.74
COG1052	324	LdhA Lactate dehydrogenase and related dehydrogena	92.72
PRK07792	306	fabG 3-ketoacyl-(acyl-carrier-protein) reductase;	92.7
PRK06407	301	ornithine cyclodeaminase; Provisional	92.67
COG1086	588	Predicted nucleoside-diphosphate sugar epimerases	92.65
PRK06171	266	sorbitol-6-phosphate 2-dehydrogenase; Provisional	92.65
PRK08223	287	hypothetical protein; Validated	92.63
TIGR01138	290	cysM cysteine synthase B. Alternate name: O-acetyl	92.62
PRK05565	247	fabG 3-ketoacyl-(acyl-carrier-protein) reductase;	92.61
PRK13256	226	thiopurine S-methyltransferase; Reviewed	92.58
PRK07102	243	short chain dehydrogenase; Provisional	92.55
PRK06123	248	short chain dehydrogenase; Provisional	92.54
KOG1611	249	consensus Predicted short chain-type dehydrogenase	92.53
PRK14902	444	16S rRNA methyltransferase B; Provisional	92.49
PRK10901	427	16S rRNA methyltransferase B; Provisional	92.43
PRK00258	278	aroE shikimate 5-dehydrogenase; Reviewed	92.41
COG0623	259	FabI Enoyl-[acyl-carrier-protein]	92.36
PRK14027	283	quinate/shikimate dehydrogenase; Provisional	92.34
cd01080	168	NAD_bind_m-THF_DH_Cyclohyd NADP binding domain of	92.31
KOG0069	336	consensus Glyoxylate/hydroxypyruvate reductase (D-	92.29
TIGR02415	254	23BDH acetoin reductases. One member of this famil	92.27
PLN02657	390	3,8-divinyl protochlorophyllide a 8-vinyl reductas	92.25
PRK06046	326	alanine dehydrogenase; Validated	92.22
PRK12769	654	putative oxidoreductase Fe-S binding subunit; Revi	92.21
TIGR00507	270	aroE shikimate 5-dehydrogenase. This model finds p	92.2
PRK08278	273	short chain dehydrogenase; Provisional	92.19
KOG1207	245	consensus Diacetyl reductase/L-xylulose reductase	92.15
PRK13243	333	glyoxylate reductase; Reviewed	92.13
PRK00216	239	ubiE ubiquinone/menaquinone biosynthesis methyltra	92.1
cd01075	200	NAD_bind_Leu_Phe_Val_DH NAD(P) binding domain of l	92.09
cd01484	234	E1-2_like Ubiquitin activating enzyme (E1), repeat	92.08
PF03446	163	NAD_binding_2: NAD binding domain of 6-phosphogluc	92.08

>KOG0024 consensus Sorbitol dehydrogenase [Secondary metabolites biosynthesis, transport and catabolism]

Probab=100.00  E-value=1.6e-63  Score=422.80  Aligned_cols=346  Identities=53%  Similarity=0.914  Sum_probs=317.2

Q ss_pred             hhcceeEEEecCCceEEEEecCCCC-CCCcEEEEEeeeeeCcccHhhhhccccCCccCCCCcccCccceEEEEEeCCCCC
Q 017868           15 EEVNMAAWLLGVNTLKIQPFELPSL-GPYDVLVRMKAVGICGSDVHYLKTLRCADFVVKEPMVIGHECAGVIEKVGSEVK   93 (365)
Q Consensus        15 ~~~~~~~~~~~~~~l~~~~~~~p~~-~~~eVlI~v~~~~l~~~D~~~~~g~~~~~~~~~~p~~~G~e~~G~V~~vG~~v~   93 (365)
                      ..+|+++++.+++++++.++|.|++ .|+||+|++.++|||.+|++.+...+.+.+..+.|.++|||.+|+|+++|+.|+
T Consensus         2 ~~~~~A~vl~g~~di~i~~~p~p~i~~p~eVlv~i~a~GICGSDvHy~~~G~ig~~v~k~PmvlGHEssGiV~evG~~Vk   81 (354)
T KOG0024|consen    2 AADNLALVLRGKGDIRIEQRPIPTITDPDEVLVAIKAVGICGSDVHYYTHGRIGDFVVKKPMVLGHESSGIVEEVGDEVK   81 (354)
T ss_pred             CcccceeEEEccCceeEeeCCCCCCCCCCEEEEEeeeEEecCccchhhccCCcCccccccccccccccccchhhhccccc
Confidence            4578999999999999999999998 999999999999999999999998887777778999999999999999999999


Q ss_pred             CCCCCCEEEEcCCcCCCCCccccCCCCCCCCCccccccCCCCcceeeEEeecCCceEECCCCCCcchhccchhhHHHHHH
Q 017868           94 TLVPGDRVALEPGISCWRCDHCKGGRYNLCPEMKFFATPPVHGSLANQVVHPADLCFKLPDNVSLEEGAMCEPLSVGLHA  173 (365)
Q Consensus        94 ~~~~Gd~V~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~v~~~~~~~iP~~~~~~~a~~~~~~~~a~~~  173 (365)
                      ++++||||+.-+..+|+.|++|++|++|+|+++.+...++.+|++++|++.++++|+++|+++|++++|++.++++++||
T Consensus        82 ~LkVGDrVaiEpg~~c~~cd~CK~GrYNlCp~m~f~atpp~~G~la~y~~~~~dfc~KLPd~vs~eeGAl~ePLsV~~HA  161 (354)
T KOG0024|consen   82 HLKVGDRVAIEPGLPCRDCDFCKEGRYNLCPHMVFCATPPVDGTLAEYYVHPADFCYKLPDNVSFEEGALIEPLSVGVHA  161 (354)
T ss_pred             ccccCCeEEecCCCccccchhhhCcccccCCccccccCCCcCCceEEEEEechHheeeCCCCCchhhcccccchhhhhhh
Confidence            99999999999999999999999999999999999999999999999999999999999999999999999999999999


Q ss_pred             HHhcCCCCCCEEEEEcCCHHHHHHHHHHHHHCCCCeEEEEeCChhHHHHHHHcCCCEEEeCCCCcccHHHHHHHHHHHhC
Q 017868          174 CRRANIGPETNVLIMGAGPIGLVTMLGAPRAFGAPRIVIVDVDDYRLSVAKEIGADNIVKVSTNLQDIAEEVEKIQKAMG  253 (365)
Q Consensus       174 ~~~~~~~~g~~vlI~G~g~~G~~ai~~l~~~~g~~~vi~v~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~i~~~~~~~~  253 (365)
                      .+++++++|++|||+|+|++|+++.. .|+.+|+..|++++..+.|++++++||++.+....... +..+..+...+..+
T Consensus       162 cr~~~vk~Gs~vLV~GAGPIGl~t~l-~Aka~GA~~VVi~d~~~~Rle~Ak~~Ga~~~~~~~~~~-~~~~~~~~v~~~~g  239 (354)
T KOG0024|consen  162 CRRAGVKKGSKVLVLGAGPIGLLTGL-VAKAMGASDVVITDLVANRLELAKKFGATVTDPSSHKS-SPQELAELVEKALG  239 (354)
T ss_pred             hhhcCcccCCeEEEECCcHHHHHHHH-HHHHcCCCcEEEeecCHHHHHHHHHhCCeEEeeccccc-cHHHHHHHHHhhcc
Confidence            99999999999999999999999999 99999999999999999999999999999877654332 22222222222223


Q ss_pred             -CCceEEEeCCCCHHHHHHHHHhcccCCEEEEEccCCCCccccchHhhhcCcEEEeecccCC-cHHHHHHHHHcCCCCCC
Q 017868          254 -TGIDVSFDCAGLNKTMSTALGATCAGGKVCLVGMGHHEMTVPLTPAAVREVDVVGVFRYKN-TWPLCLELLRSGKIDVK  331 (365)
Q Consensus       254 -~~~d~vid~~g~~~~~~~~~~~l~~~G~~~~~g~~~~~~~~~~~~~~~~~~~i~~~~~~~~-~~~~~~~~l~~g~~~~~  331 (365)
                       ..+|++|||+|....++.++.+++.+|++++.++......++...+..|++++.|++.+.. ++..+++++++|+++++
T Consensus       240 ~~~~d~~~dCsG~~~~~~aai~a~r~gGt~vlvg~g~~~~~fpi~~v~~kE~~~~g~fry~~~~y~~ai~li~sGki~~k  319 (354)
T KOG0024|consen  240 KKQPDVTFDCSGAEVTIRAAIKATRSGGTVVLVGMGAEEIQFPIIDVALKEVDLRGSFRYCNGDYPTAIELVSSGKIDVK  319 (354)
T ss_pred             ccCCCeEEEccCchHHHHHHHHHhccCCEEEEeccCCCccccChhhhhhheeeeeeeeeeccccHHHHHHHHHcCCcCch
Confidence             5599999999999899999999999999999999888889999999999999999999955 99999999999999999


Q ss_pred             CceEEEecCChhhHHHHHHHHhcCC-CceEEEEe
Q 017868          332 PLVTHRFGFSQKEVEEAFETSARGG-TAIKVMFN  364 (365)
Q Consensus       332 ~~~~~~~~~~~~~~~~a~~~~~~~~-~~gk~vi~  364 (365)
                      +++++.|++  +++.+||+.+..++ ...|++++
T Consensus       320 ~lIT~r~~~--~~~~eAf~~~~~~~~~~iKv~i~  351 (354)
T KOG0024|consen  320 PLITHRYKF--DDADEAFETLQHGEEGVIKVIIT  351 (354)
T ss_pred             hheeccccc--chHHHHHHHHHhCcCCceEEEEe
Confidence            999999999  99999999988774 36788875

>COG1064 AdhP Zn-dependent alcohol dehydrogenases [General function prediction only]

Probab=100.00  E-value=8.3e-61  Score=419.53  Aligned_cols=331  Identities=30%  Similarity=0.490  Sum_probs=297.2

Q ss_pred             hhcceeEEEecCC-ceEEEEecCCCCCCCcEEEEEeeeeeCcccHhhhhccccCCccCCCCcccCccceEEEEEeCCCCC
Q 017868           15 EEVNMAAWLLGVN-TLKIQPFELPSLGPYDVLVRMKAVGICGSDVHYLKTLRCADFVVKEPMVIGHECAGVIEKVGSEVK   93 (365)
Q Consensus        15 ~~~~~~~~~~~~~-~l~~~~~~~p~~~~~eVlI~v~~~~l~~~D~~~~~g~~~~~~~~~~p~~~G~e~~G~V~~vG~~v~   93 (365)
                      +.+|+|+++.+.+ ++++.+++.|+|+|+||+|+|.|+|+|++|++.++|....   ..+|+++|||.+|+|+++|++|+
T Consensus         1 ~~~mkA~~~~~~~~pl~i~e~~~p~p~~~eVlI~v~~~GVChsDlH~~~G~~~~---~~~P~ipGHEivG~V~~vG~~V~   77 (339)
T COG1064           1 MMTMKAAVLKKFGQPLEIEEVPVPEPGPGEVLIKVEACGVCHTDLHVAKGDWPV---PKLPLIPGHEIVGTVVEVGEGVT   77 (339)
T ss_pred             CcceEEEEEccCCCCceEEeccCCCCCCCeEEEEEEEEeecchhhhhhcCCCCC---CCCCccCCcceEEEEEEecCCCc
Confidence            4679999999764 5999999999999999999999999999999999874332   45899999999999999999999


Q ss_pred             CCCCCCEEEE-cCCcCCCCCccccCCCCCCCCCccccccCCCCcceeeEEeecCCceEECCCCCCcchhccch-hhHHHH
Q 017868           94 TLVPGDRVAL-EPGISCWRCDHCKGGRYNLCPEMKFFATPPVHGSLANQVVHPADLCFKLPDNVSLEEGAMCE-PLSVGL  171 (365)
Q Consensus        94 ~~~~Gd~V~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~v~~~~~~~iP~~~~~~~a~~~~-~~~~a~  171 (365)
                      +|++||||.+ +...+|++|+||+.++.++|++....+. +.+|+|+||+++++++++++|+++++++||.+. ...|+|
T Consensus        78 ~~k~GDrVgV~~~~~~Cg~C~~C~~G~E~~C~~~~~~gy-~~~GGyaeyv~v~~~~~~~iP~~~d~~~aApllCaGiT~y  156 (339)
T COG1064          78 GLKVGDRVGVGWLVISCGECEYCRSGNENLCPNQKITGY-TTDGGYAEYVVVPARYVVKIPEGLDLAEAAPLLCAGITTY  156 (339)
T ss_pred             cCCCCCEEEecCccCCCCCCccccCcccccCCCccccce-eecCcceeEEEEchHHeEECCCCCChhhhhhhhcCeeeEe
Confidence            9999999988 9999999999999999999999888777 488999999999999999999999999999885 677899


Q ss_pred             HHHHhcCCCCCCEEEEEcCCHHHHHHHHHHHHHCCCCeEEEEeCChhHHHHHHHcCCCEEEeCCCCcccHHHHHHHHHHH
Q 017868          172 HACRRANIGPETNVLIMGAGPIGLVTMLGAPRAFGAPRIVIVDVDDYRLSVAKEIGADNIVKVSTNLQDIAEEVEKIQKA  251 (365)
Q Consensus       172 ~~~~~~~~~~g~~vlI~G~g~~G~~ai~~l~~~~g~~~vi~v~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~i~~~~~~  251 (365)
                      ++++..+++||++|+|.|+|++|++++| +|+.+|+ .|++++++++|.+++++||++++++..  +++..+.+++    
T Consensus       157 ~alk~~~~~pG~~V~I~G~GGlGh~avQ-~Aka~ga-~Via~~~~~~K~e~a~~lGAd~~i~~~--~~~~~~~~~~----  228 (339)
T COG1064         157 RALKKANVKPGKWVAVVGAGGLGHMAVQ-YAKAMGA-EVIAITRSEEKLELAKKLGADHVINSS--DSDALEAVKE----  228 (339)
T ss_pred             eehhhcCCCCCCEEEEECCcHHHHHHHH-HHHHcCC-eEEEEeCChHHHHHHHHhCCcEEEEcC--CchhhHHhHh----
Confidence            9999999999999999999999999999 9999997 799999999999999999999998843  4555454432    


Q ss_pred             hCCCceEEEeCCCCHHHHHHHHHhcccCCEEEEEccCC-CC-ccccchHhhhcCcEEEeeccc-CCcHHHHHHHHHcCCC
Q 017868          252 MGTGIDVSFDCAGLNKTMSTALGATCAGGKVCLVGMGH-HE-MTVPLTPAAVREVDVVGVFRY-KNTWPLCLELLRSGKI  328 (365)
Q Consensus       252 ~~~~~d~vid~~g~~~~~~~~~~~l~~~G~~~~~g~~~-~~-~~~~~~~~~~~~~~i~~~~~~-~~~~~~~~~~l~~g~~  328 (365)
                         .+|++||+++ +..+..+++.|+++|+++.+|... .. ..++...+.++++++.|+... ..++++++++..+|.+
T Consensus       229 ---~~d~ii~tv~-~~~~~~~l~~l~~~G~~v~vG~~~~~~~~~~~~~~li~~~~~i~GS~~g~~~d~~e~l~f~~~g~I  304 (339)
T COG1064         229 ---IADAIIDTVG-PATLEPSLKALRRGGTLVLVGLPGGGPIPLLPAFLLILKEISIVGSLVGTRADLEEALDFAAEGKI  304 (339)
T ss_pred             ---hCcEEEECCC-hhhHHHHHHHHhcCCEEEEECCCCCcccCCCCHHHhhhcCeEEEEEecCCHHHHHHHHHHHHhCCc
Confidence               3999999999 889999999999999999999874 33 346677788999999999877 7789999999999999


Q ss_pred             CCCCceEEEecCChhhHHHHHHHHhcCCCceEEEEeC
Q 017868          329 DVKPLVTHRFGFSQKEVEEAFETSARGGTAIKVMFNL  365 (365)
Q Consensus       329 ~~~~~~~~~~~~~~~~~~~a~~~~~~~~~~gk~vi~~  365 (365)
                        +|.+.+.+++  +++++||+.+++++..|+.||++
T Consensus       305 --kp~i~e~~~l--~~in~A~~~m~~g~v~gR~Vi~~  337 (339)
T COG1064         305 --KPEILETIPL--DEINEAYERMEKGKVRGRAVIDM  337 (339)
T ss_pred             --eeeEEeeECH--HHHHHHHHHHHcCCeeeEEEecC
Confidence              6666567888  99999999999999999999864

>PRK09880 L-idonate 5-dehydrogenase; Provisional

Probab=100.00  E-value=1e-53  Score=392.04  Aligned_cols=338  Identities=30%  Similarity=0.535  Sum_probs=291.8

Q ss_pred             hhcceeEEEecCCceEEEEecCCCCCCCcEEEEEeeeeeCcccHhhhhccccCCccCCCCcccCccceEEEEEeCCCCCC
Q 017868           15 EEVNMAAWLLGVNTLKIQPFELPSLGPYDVLVRMKAVGICGSDVHYLKTLRCADFVVKEPMVIGHECAGVIEKVGSEVKT   94 (365)
Q Consensus        15 ~~~~~~~~~~~~~~l~~~~~~~p~~~~~eVlI~v~~~~l~~~D~~~~~g~~~~~~~~~~p~~~G~e~~G~V~~vG~~v~~   94 (365)
                      ...++++++.+++++++++++.| +.++||+|||.++++|++|++.+.+...+.....+|.++|||++|+|+++  ++++
T Consensus         2 ~~~~~~~~~~~~~~~~~~~~~~p-~~~~evlVkv~a~gic~sD~~~~~~g~~~~~~~~~p~v~GhE~~G~V~~v--~v~~   78 (343)
T PRK09880          2 QVKTQSCVVAGKKDVAVTEQEIE-WNNNGTLVQITRGGICGSDLHYYQEGKVGNFVIKAPMVLGHEVIGKIVHS--DSSG   78 (343)
T ss_pred             cccceEEEEecCCceEEEecCCC-CCCCeEEEEEEEEEECccccHhhccCCcccccccCCcccCcccEEEEEEe--cCcc
Confidence            45688999999999999999997 68999999999999999999987543222223467999999999999999  7889


Q ss_pred             CCCCCEEEEcCCcCCCCCccccCCCCCCCCCccccccC----CCCcceeeEEeecCCceEECCCCCCcchhccchhhHHH
Q 017868           95 LVPGDRVALEPGISCWRCDHCKGGRYNLCPEMKFFATP----PVHGSLANQVVHPADLCFKLPDNVSLEEGAMCEPLSVG  170 (365)
Q Consensus        95 ~~~Gd~V~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~----~~~g~~~~~~~v~~~~~~~iP~~~~~~~a~~~~~~~~a  170 (365)
                      |++||||+..+..+|++|++|+.+.+++|++...++..    ..+|+|+||++++++.++++|+++++++++...++++|
T Consensus        79 ~~vGdrV~~~~~~~cg~c~~c~~g~~~~c~~~~~~g~~~~~~~~~G~~aey~~v~~~~~~~~P~~l~~~~aa~~~~~~~a  158 (343)
T PRK09880         79 LKEGQTVAINPSKPCGHCKYCLSHNENQCTTMRFFGSAMYFPHVDGGFTRYKVVDTAQCIPYPEKADEKVMAFAEPLAVA  158 (343)
T ss_pred             CCCCCEEEECCCCCCcCChhhcCCChhhCCCcceeecccccCCCCCceeeeEEechHHeEECCCCCCHHHHHhhcHHHHH
Confidence            99999999999999999999999999999987766531    24799999999999999999999999887777788999


Q ss_pred             HHHHHhcCCCCCCEEEEEcCCHHHHHHHHHHHHHCCCCeEEEEeCChhHHHHHHHcCCCEEEeCCCCcccHHHHHHHHHH
Q 017868          171 LHACRRANIGPETNVLIMGAGPIGLVTMLGAPRAFGAPRIVIVDVDDYRLSVAKEIGADNIVKVSTNLQDIAEEVEKIQK  250 (365)
Q Consensus       171 ~~~~~~~~~~~g~~vlI~G~g~~G~~ai~~l~~~~g~~~vi~v~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~i~~~~~  250 (365)
                      |++++.....+|++|||+|+|++|++++| +++.+|+++|++++++++|.++++++|++.++++.+  +++.+    +..
T Consensus       159 ~~al~~~~~~~g~~VlV~G~G~vG~~aiq-lak~~G~~~Vi~~~~~~~~~~~a~~lGa~~vi~~~~--~~~~~----~~~  231 (343)
T PRK09880        159 IHAAHQAGDLQGKRVFVSGVGPIGCLIVA-AVKTLGAAEIVCADVSPRSLSLAREMGADKLVNPQN--DDLDH----YKA  231 (343)
T ss_pred             HHHHHhcCCCCCCEEEEECCCHHHHHHHH-HHHHcCCcEEEEEeCCHHHHHHHHHcCCcEEecCCc--ccHHH----Hhc
Confidence            99998777778999999999999999999 999999988899999999999999999999887643  33332    222


Q ss_pred             HhCCCceEEEeCCCCHHHHHHHHHhcccCCEEEEEccCCCCccccchHhhhcCcEEEeecccCCcHHHHHHHHHcCCCCC
Q 017868          251 AMGTGIDVSFDCAGLNKTMSTALGATCAGGKVCLVGMGHHEMTVPLTPAAVREVDVVGVFRYKNTWPLCLELLRSGKIDV  330 (365)
Q Consensus       251 ~~~~~~d~vid~~g~~~~~~~~~~~l~~~G~~~~~g~~~~~~~~~~~~~~~~~~~i~~~~~~~~~~~~~~~~l~~g~~~~  330 (365)
                      . .+++|++||++|.+..+..++++++++|+++.+|.......++...+..+++++.+++.+.+.++++++++++|.+.+
T Consensus       232 ~-~g~~D~vid~~G~~~~~~~~~~~l~~~G~iv~~G~~~~~~~~~~~~~~~k~~~i~g~~~~~~~~~~~~~l~~~g~i~~  310 (343)
T PRK09880        232 E-KGYFDVSFEVSGHPSSINTCLEVTRAKGVMVQVGMGGAPPEFPMMTLIVKEISLKGSFRFTEEFNTAVSWLANGVINP  310 (343)
T ss_pred             c-CCCCCEEEECCCCHHHHHHHHHHhhcCCEEEEEccCCCCCccCHHHHHhCCcEEEEEeeccccHHHHHHHHHcCCCCc
Confidence            1 246999999999877888999999999999999975544456666678899999998877788999999999999977


Q ss_pred             CCceEEEecCChhhHHHHHHHHhcCCCceEEEEeC
Q 017868          331 KPLVTHRFGFSQKEVEEAFETSARGGTAIKVMFNL  365 (365)
Q Consensus       331 ~~~~~~~~~~~~~~~~~a~~~~~~~~~~gk~vi~~  365 (365)
                      .+.++++|++  +++.+|++.+.++...||+++++
T Consensus       311 ~~~i~~~~~l--~~~~~A~~~~~~~~~~gKvvl~~  343 (343)
T PRK09880        311 LPLLSAEYPF--TDLEEALIFAGDKTQAAKVQLVF  343 (343)
T ss_pred             hhheEEEEEH--HHHHHHHHHHhcCCCceEEEEeC
Confidence            7788999999  99999999999888889999974

>COG1062 AdhC Zn-dependent alcohol dehydrogenases, class III [Energy production and conversion]

Probab=100.00  E-value=2.7e-53  Score=363.68  Aligned_cols=336  Identities=28%  Similarity=0.455  Sum_probs=290.1

Q ss_pred             cceeEEEecC-CceEEEEecCCCCCCCcEEEEEeeeeeCcccHhhhhccccCCccCCCCcccCccceEEEEEeCCCCCCC
Q 017868           17 VNMAAWLLGV-NTLKIQPFELPSLGPYDVLVRMKAVGICGSDVHYLKTLRCADFVVKEPMVIGHECAGVIEKVGSEVKTL   95 (365)
Q Consensus        17 ~~~~~~~~~~-~~l~~~~~~~p~~~~~eVlI~v~~~~l~~~D~~~~~g~~~~~~~~~~p~~~G~e~~G~V~~vG~~v~~~   95 (365)
                      +++++++.++ ++|+++++++++|+++||+||+.++|+|.+|...+.|.++    ..+|.++|||++|+|++||++|+++
T Consensus         2 k~~aAV~~~~~~Pl~i~ei~l~~P~~gEVlVri~AtGVCHTD~~~~~G~~p----~~~P~vLGHEgAGiVe~VG~gVt~v   77 (366)
T COG1062           2 KTRAAVAREAGKPLEIEEVDLDPPRAGEVLVRITATGVCHTDAHTLSGDDP----EGFPAVLGHEGAGIVEAVGEGVTSV   77 (366)
T ss_pred             CceEeeeecCCCCeEEEEEecCCCCCCeEEEEEEEeeccccchhhhcCCCC----CCCceecccccccEEEEecCCcccc
Confidence            5788888865 7999999999999999999999999999999999987543    3489999999999999999999999


Q ss_pred             CCCCEEEEcCCcCCCCCccccCCCCCCCCCcccccc------------------CCCC--cceeeEEeecCCceEECCCC
Q 017868           96 VPGDRVALEPGISCWRCDHCKGGRYNLCPEMKFFAT------------------PPVH--GSLANQVVHPADLCFKLPDN  155 (365)
Q Consensus        96 ~~Gd~V~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~------------------~~~~--g~~~~~~~v~~~~~~~iP~~  155 (365)
                      +|||+|+..+..+|++|.+|..+++++|......-.                  .+..  ++|+||..+++..++++++.
T Consensus        78 kpGDhVI~~f~p~CG~C~~C~sGk~nlC~~~~~~~~kG~m~dGttrls~~~~~~~h~lG~stFa~y~vv~~~s~vki~~~  157 (366)
T COG1062          78 KPGDHVILLFTPECGQCKFCLSGKPNLCEAIRATQGKGTMPDGTTRLSGNGVPVYHYLGCSTFAEYTVVHEISLVKIDPD  157 (366)
T ss_pred             CCCCEEEEcccCCCCCCchhhCCCcccccchhhhcccccccCCceeeecCCcceeeeeccccchhheeecccceEECCCC
Confidence            999999999999999999999999999973322211                  0122  49999999999999999999


Q ss_pred             CCcchhccch-hhHHHHHHH-HhcCCCCCCEEEEEcCCHHHHHHHHHHHHHCCCCeEEEEeCChhHHHHHHHcCCCEEEe
Q 017868          156 VSLEEGAMCE-PLSVGLHAC-RRANIGPETNVLIMGAGPIGLVTMLGAPRAFGAPRIVIVDVDDYRLSVAKEIGADNIVK  233 (365)
Q Consensus       156 ~~~~~a~~~~-~~~~a~~~~-~~~~~~~g~~vlI~G~g~~G~~ai~~l~~~~g~~~vi~v~~~~~~~~~~~~~g~~~~~~  233 (365)
                      .+++.++++. ...|.+-++ +.+++++|++|.|.|.|++|++++| -|+..|+.++|+++.+++|++++++||++++++
T Consensus       158 ~p~~~a~llGCgV~TG~Gav~nta~v~~G~tvaV~GlGgVGlaaI~-gA~~agA~~IiAvD~~~~Kl~~A~~fGAT~~vn  236 (366)
T COG1062         158 APLEKACLLGCGVTTGIGAVVNTAKVEPGDTVAVFGLGGVGLAAIQ-GAKAAGAGRIIAVDINPEKLELAKKFGATHFVN  236 (366)
T ss_pred             CCccceEEEeeeeccChHHhhhcccCCCCCeEEEEeccHhHHHHHH-HHHHcCCceEEEEeCCHHHHHHHHhcCCceeec
Confidence            9999999986 566777765 7799999999999999999999999 999999999999999999999999999999987


Q ss_pred             CCCCcccHHHHHHHHHHHhCCCceEEEeCCCCHHHHHHHHHhcccCCEEEEEccCCCCccccchHh-hhcCcEEEeeccc
Q 017868          234 VSTNLQDIAEEVEKIQKAMGTGIDVSFDCAGLNKTMSTALGATCAGGKVCLVGMGHHEMTVPLTPA-AVREVDVVGVFRY  312 (365)
Q Consensus       234 ~~~~~~~~~~~i~~~~~~~~~~~d~vid~~g~~~~~~~~~~~l~~~G~~~~~g~~~~~~~~~~~~~-~~~~~~i~~~~~~  312 (365)
                      -.+.. +..+.+.+++   ++++|++|||+|....+.+++.++.++|+.+++|........+.+.+ ...+..++|++..
T Consensus       237 ~~~~~-~vv~~i~~~T---~gG~d~~~e~~G~~~~~~~al~~~~~~G~~v~iGv~~~~~~i~~~~~~lv~gr~~~Gs~~G  312 (366)
T COG1062         237 PKEVD-DVVEAIVELT---DGGADYAFECVGNVEVMRQALEATHRGGTSVIIGVAGAGQEISTRPFQLVTGRVWKGSAFG  312 (366)
T ss_pred             chhhh-hHHHHHHHhc---CCCCCEEEEccCCHHHHHHHHHHHhcCCeEEEEecCCCCceeecChHHeeccceEEEEeec
Confidence            43221 5777777664   56999999999999999999999999999999997766555555553 2234788888754


Q ss_pred             ----CCcHHHHHHHHHcCCCCCCCceEEEecCChhhHHHHHHHHhcCCCceEEEEe
Q 017868          313 ----KNTWPLCLELLRSGKIDVKPLVTHRFGFSQKEVEEAFETSARGGTAIKVMFN  364 (365)
Q Consensus       313 ----~~~~~~~~~~l~~g~~~~~~~~~~~~~~~~~~~~~a~~~~~~~~~~gk~vi~  364 (365)
                          +.++...++++.+|++.+.+++++.++|  +|+++||+.+.+++.. |.||.
T Consensus       313 ~~~p~~diP~lv~~y~~Gkl~~d~lvt~~~~L--e~INeaf~~m~~G~~I-R~Vi~  365 (366)
T COG1062         313 GARPRSDIPRLVDLYMAGKLPLDRLVTHTIPL--EDINEAFDLMHEGKSI-RSVIR  365 (366)
T ss_pred             CCccccchhHHHHHHHcCCCchhHHhhccccH--HHHHHHHHHHhCCcee-eEEec
Confidence                6789999999999999999999999999  9999999999998554 66664

>cd08239 THR_DH_like L-threonine dehydrogenase (TDH)-like

Probab=100.00  E-value=3.1e-51  Score=375.64  Aligned_cols=335  Identities=33%  Similarity=0.573  Sum_probs=288.3

Q ss_pred             ceeEEEecCCceEEEEecCCCCCCCcEEEEEeeeeeCcccHhhhhccccCCccCCCCcccCccceEEEEEeCCCCCCCCC
Q 017868           18 NMAAWLLGVNTLKIQPFELPSLGPYDVLVRMKAVGICGSDVHYLKTLRCADFVVKEPMVIGHECAGVIEKVGSEVKTLVP   97 (365)
Q Consensus        18 ~~~~~~~~~~~l~~~~~~~p~~~~~eVlI~v~~~~l~~~D~~~~~g~~~~~~~~~~p~~~G~e~~G~V~~vG~~v~~~~~   97 (365)
                      |+|+++.+++.++++++|.|.++++||+|||.++++|++|++.+.+.+..  ...+|.++|||++|+|+++|++|++|++
T Consensus         1 mka~~~~~~~~l~~~~~~~p~~~~~evlV~v~~~gi~~~D~~~~~~~~~~--~~~~p~i~G~e~~G~V~~vG~~v~~~~~   78 (339)
T cd08239           1 MRGAVFPGDRTVELREFPVPVPGPGEVLLRVKASGLCGSDLHYYYHGHRA--PAYQGVIPGHEPAGVVVAVGPGVTHFRV   78 (339)
T ss_pred             CeEEEEecCCceEEEecCCCCCCCCeEEEEEEEEEeccccHHHHcCCCCc--cCCCCceeccCceEEEEEECCCCccCCC
Confidence            68889998899999999999999999999999999999999988764322  1235789999999999999999999999


Q ss_pred             CCEEEEcCCcCCCCCccccCCCCCCCCCccc-cccCCCCcceeeEEeecCCceEECCCCCCcchhccch-hhHHHHHHHH
Q 017868           98 GDRVALEPGISCWRCDHCKGGRYNLCPEMKF-FATPPVHGSLANQVVHPADLCFKLPDNVSLEEGAMCE-PLSVGLHACR  175 (365)
Q Consensus        98 Gd~V~~~~~~~~~~~~~~~~~~~~~~~~~~~-~~~~~~~g~~~~~~~v~~~~~~~iP~~~~~~~a~~~~-~~~~a~~~~~  175 (365)
                      ||+|++.+..+|++|++|+.++++.|.+... .+. ..+|+|+||+.+++++++++|+++++++|+.++ ++.|||++++
T Consensus        79 Gd~V~~~~~~~c~~c~~c~~g~~~~c~~~~~~~g~-~~~G~~ae~~~v~~~~~~~~P~~~~~~~aa~l~~~~~ta~~~l~  157 (339)
T cd08239          79 GDRVMVYHYVGCGACRNCRRGWMQLCTSKRAAYGW-NRDGGHAEYMLVPEKTLIPLPDDLSFADGALLLCGIGTAYHALR  157 (339)
T ss_pred             CCEEEECCCCCCCCChhhhCcCcccCcCccccccc-CCCCcceeEEEechHHeEECCCCCCHHHhhhhcchHHHHHHHHH
Confidence            9999999999999999999999999987654 222 357999999999999999999999999998876 7889999998


Q ss_pred             hcCCCCCCEEEEEcCCHHHHHHHHHHHHHCCCCeEEEEeCChhHHHHHHHcCCCEEEeCCCCcccHHHHHHHHHHHhCCC
Q 017868          176 RANIGPETNVLIMGAGPIGLVTMLGAPRAFGAPRIVIVDVDDYRLSVAKEIGADNIVKVSTNLQDIAEEVEKIQKAMGTG  255 (365)
Q Consensus       176 ~~~~~~g~~vlI~G~g~~G~~ai~~l~~~~g~~~vi~v~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~i~~~~~~~~~~  255 (365)
                      ..++++|++|||+|+|++|++++| +++.+|++.+++++++++|.++++++|++.++++..  ++ .+.+.+..  .+.+
T Consensus       158 ~~~~~~g~~vlV~G~G~vG~~~~~-~ak~~G~~~vi~~~~~~~~~~~~~~~ga~~~i~~~~--~~-~~~~~~~~--~~~~  231 (339)
T cd08239         158 RVGVSGRDTVLVVGAGPVGLGALM-LARALGAEDVIGVDPSPERLELAKALGADFVINSGQ--DD-VQEIRELT--SGAG  231 (339)
T ss_pred             hcCCCCCCEEEEECCCHHHHHHHH-HHHHcCCCEEEEECCCHHHHHHHHHhCCCEEEcCCc--ch-HHHHHHHh--CCCC
Confidence            888999999999999999999999 999999976888989999999999999998887543  33 44555443  2568


Q ss_pred             ceEEEeCCCCHHHHHHHHHhcccCCEEEEEccCCCCcccc-chHhhhcCcEEEeeccc-CCcHHHHHHHHHcCCCCCCCc
Q 017868          256 IDVSFDCAGLNKTMSTALGATCAGGKVCLVGMGHHEMTVP-LTPAAVREVDVVGVFRY-KNTWPLCLELLRSGKIDVKPL  333 (365)
Q Consensus       256 ~d~vid~~g~~~~~~~~~~~l~~~G~~~~~g~~~~~~~~~-~~~~~~~~~~i~~~~~~-~~~~~~~~~~l~~g~~~~~~~  333 (365)
                      +|++||++|+...+..++++++++|+++.+|..... .+. ...+..+++++.+++.. .+.+++++++++++.+.+.+.
T Consensus       232 ~d~vid~~g~~~~~~~~~~~l~~~G~~v~~g~~~~~-~~~~~~~~~~~~~~i~g~~~~~~~~~~~~~~~~~~g~i~~~~~  310 (339)
T cd08239         232 ADVAIECSGNTAARRLALEAVRPWGRLVLVGEGGEL-TIEVSNDLIRKQRTLIGSWYFSVPDMEECAEFLARHKLEVDRL  310 (339)
T ss_pred             CCEEEECCCCHHHHHHHHHHhhcCCEEEEEcCCCCc-ccCcHHHHHhCCCEEEEEecCCHHHHHHHHHHHHcCCCChhHe
Confidence            999999999887778899999999999999864432 222 23467789999998876 468999999999999977788


Q ss_pred             eEEEecCChhhHHHHHHHHhcCCCceEEEEeC
Q 017868          334 VTHRFGFSQKEVEEAFETSARGGTAIKVMFNL  365 (365)
Q Consensus       334 ~~~~~~~~~~~~~~a~~~~~~~~~~gk~vi~~  365 (365)
                      ++++|++  +++.+|++.++++. .||+||++
T Consensus       311 i~~~~~l--~~~~~a~~~~~~~~-~gKvvi~~  339 (339)
T cd08239         311 VTHRFGL--DQAPEAYALFAQGE-SGKVVFVF  339 (339)
T ss_pred             EEEEecH--HHHHHHHHHHHcCC-ceEEEEeC
Confidence            9999999  99999999998874 79999975

MDR/AHD-like proteins, including a protein annotated as a threonine dehydrogenase. L-threonine dehydrogenase (TDH) catalyzes the zinc-dependent formation of 2-amino-3-ketobutyrate from L-threonine via NAD(H)-dependent oxidation. The zinc-dependent alcohol dehydrogenases (ADHs) catalyze the NAD(P)(H)-dependent interconversion of alcohols to aldehydes or ketones. Zinc-dependent ADHs are medium chain dehydrogenase/reductase type proteins (MDRs) and have a NAD(P)(H)-binding domain in a Rossmann fold of an beta-alpha form. The N-terminal region typically has an all-beta catalytic domain. In addition to alcohol dehydrogenases, this group includes quinone reductase, sorbitol dehydrogenase, formaldehyde dehydrogenase, butanediol DH, ketose reductase, cinnamyl reductase, and numerous others. These proteins typically form dimers (typically higher plants, mammals) or tetramers (yeast, bacteria), and generally have 2 tightly bound zinc at

>PLN02702 L-idonate 5-dehydrogenase

Probab=100.00  E-value=1.5e-50  Score=374.34  Aligned_cols=363  Identities=88%  Similarity=1.396  Sum_probs=310.3

Q ss_pred             CCCCCCCccccccchhcceeEEEecCCceEEEEecCCCCCCCcEEEEEeeeeeCcccHhhhhccccCCccCCCCcccCcc
Q 017868            1 MGKGGMSQGEKEDGEEVNMAAWLLGVNTLKIQPFELPSLGPYDVLVRMKAVGICGSDVHYLKTLRCADFVVKEPMVIGHE   80 (365)
Q Consensus         1 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~p~~~~~eVlI~v~~~~l~~~D~~~~~g~~~~~~~~~~p~~~G~e   80 (365)
                      |||||||+++-.-.+..++++|+.++..+++.+.+.|++.++||+|||.++++|+.|+....+...+.+...+|.++|||
T Consensus         1 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~p~~~~~ev~Ikv~~~~i~~~d~~~~~g~~~~~~~~~~p~~~G~e   80 (364)
T PLN02702          1 MGKGGMSSGEGSGVEEENMAAWLVGVNTLKIQPFKLPPLGPHDVRVRMKAVGICGSDVHYLKTMRCADFVVKEPMVIGHE   80 (364)
T ss_pred             CCCCccccCCCcccccccceEEEecCCceEEEeccCCCCCCCeEEEEEEEEEEchhhhHHHcCCCCccccCCCCcccccc
Confidence            89999999998888888999999999999999999999999999999999999999999887643332223457889999


Q ss_pred             ceEEEEEeCCCCCCCCCCCEEEEcCCcCCCCCccccCCCCCCCCCccccccCCCCcceeeEEeecCCceEECCCCCCcch
Q 017868           81 CAGVIEKVGSEVKTLVPGDRVALEPGISCWRCDHCKGGRYNLCPEMKFFATPPVHGSLANQVVHPADLCFKLPDNVSLEE  160 (365)
Q Consensus        81 ~~G~V~~vG~~v~~~~~Gd~V~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~v~~~~~~~iP~~~~~~~  160 (365)
                      ++|+|+++|+++++|++||+|++.+..+|++|++|..+..+.|+....++....+|+|++|+.+++..++++|+++++++
T Consensus        81 ~~G~V~~vG~~v~~~~~Gd~V~~~~~~~~~~c~~c~~g~~~~c~~~~~~~~~~~~g~~~~y~~v~~~~~~~~P~~l~~~~  160 (364)
T PLN02702         81 CAGIIEEVGSEVKHLVVGDRVALEPGISCWRCNLCKEGRYNLCPEMKFFATPPVHGSLANQVVHPADLCFKLPENVSLEE  160 (364)
T ss_pred             eeEEEEEECCCCCCCCCCCEEEEcCCCCCCCCcchhCcCcccCCCccccCCCCCCCcccceEEcchHHeEECCCCCCHHH
Confidence            99999999999999999999999999999999999999999998755444334479999999999999999999999999


Q ss_pred             hccchhhHHHHHHHHhcCCCCCCEEEEEcCCHHHHHHHHHHHHHCCCCeEEEEeCChhHHHHHHHcCCCEEEeCCCCccc
Q 017868          161 GAMCEPLSVGLHACRRANIGPETNVLIMGAGPIGLVTMLGAPRAFGAPRIVIVDVDDYRLSVAKEIGADNIVKVSTNLQD  240 (365)
Q Consensus       161 a~~~~~~~~a~~~~~~~~~~~g~~vlI~G~g~~G~~ai~~l~~~~g~~~vi~v~~~~~~~~~~~~~g~~~~~~~~~~~~~  240 (365)
                      ++...++++++++++..++.++++|||+|+|++|+++++ +++..|+++++++++++++.++++++|++.++++.....+
T Consensus       161 aa~~~~~~~a~~~~~~~~~~~g~~vlI~g~g~vG~~~~~-~a~~~G~~~v~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~  239 (364)
T PLN02702        161 GAMCEPLSVGVHACRRANIGPETNVLVMGAGPIGLVTML-AARAFGAPRIVIVDVDDERLSVAKQLGADEIVLVSTNIED  239 (364)
T ss_pred             HhhhhHHHHHHHHHHhcCCCCCCEEEEECCCHHHHHHHH-HHHHcCCCEEEEECCCHHHHHHHHHhCCCEEEecCccccc
Confidence            886556667888887788999999999988999999999 9999999888889889999999999999988776544456


Q ss_pred             HHHHHHHHHHHhCCCceEEEeCCCCHHHHHHHHHhcccCCEEEEEccCCCCccccchHhhhcCcEEEeecccCCcHHHHH
Q 017868          241 IAEEVEKIQKAMGTGIDVSFDCAGLNKTMSTALGATCAGGKVCLVGMGHHEMTVPLTPAAVREVDVVGVFRYKNTWPLCL  320 (365)
Q Consensus       241 ~~~~i~~~~~~~~~~~d~vid~~g~~~~~~~~~~~l~~~G~~~~~g~~~~~~~~~~~~~~~~~~~i~~~~~~~~~~~~~~  320 (365)
                      +.+.+..+.+..+.++|++||++|....+...+++++++|+++.+|.......++......+++++.+.+.....+.+++
T Consensus       240 ~~~~~~~~~~~~~~~~d~vid~~g~~~~~~~~~~~l~~~G~~v~~g~~~~~~~~~~~~~~~~~~~i~~~~~~~~~~~~~~  319 (364)
T PLN02702        240 VESEVEEIQKAMGGGIDVSFDCVGFNKTMSTALEATRAGGKVCLVGMGHNEMTVPLTPAAAREVDVVGVFRYRNTWPLCL  319 (364)
T ss_pred             HHHHHHHHhhhcCCCCCEEEECCCCHHHHHHHHHHHhcCCEEEEEccCCCCCcccHHHHHhCccEEEEeccChHHHHHHH
Confidence            76766655433456899999999976788999999999999999985433334455567888999999877667889999


Q ss_pred             HHHHcCCCCCCCceEEEecCChhhHHHHHHHHhcCCCceEEEEe
Q 017868          321 ELLRSGKIDVKPLVTHRFGFSQKEVEEAFETSARGGTAIKVMFN  364 (365)
Q Consensus       321 ~~l~~g~~~~~~~~~~~~~~~~~~~~~a~~~~~~~~~~gk~vi~  364 (365)
                      ++++++.+.+.+.+++.|+++++++++|++.+.+++..+|+++.
T Consensus       320 ~~~~~~~l~~~~~~~~~~~l~~~~~~~a~~~~~~~~~~~kvv~~  363 (364)
T PLN02702        320 EFLRSGKIDVKPLITHRFGFSQKEVEEAFETSARGGNAIKVMFN  363 (364)
T ss_pred             HHHHcCCCCchHheEEEeccChHHHHHHHHHHhcCCCceEEEEe
Confidence            99999998655667788878778999999999988888999986

>KOG0023 consensus Alcohol dehydrogenase, class V [Secondary metabolites biosynthesis, transport and catabolism]

Probab=100.00  E-value=7.1e-51  Score=344.78  Aligned_cols=338  Identities=27%  Similarity=0.406  Sum_probs=286.4

Q ss_pred             ccchhcceeEEEecC---CceEEEEecCCCCCCCcEEEEEeeeeeCcccHhhhhccccCCccCCCCcccCccceEEEEEe
Q 017868           12 EDGEEVNMAAWLLGV---NTLKIQPFELPSLGPYDVLVRMKAVGICGSDVHYLKTLRCADFVVKEPMVIGHECAGVIEKV   88 (365)
Q Consensus        12 ~~~~~~~~~~~~~~~---~~l~~~~~~~p~~~~~eVlI~v~~~~l~~~D~~~~~g~~~~~~~~~~p~~~G~e~~G~V~~v   88 (365)
                      +.-+.+++++....+   .++++..++.|+++++||+|+|+|+|+|.+|++.+.|..   ....+|.++|||.+|+|+++
T Consensus         4 ~~~p~k~~g~~~~~~~G~l~p~~~~~~~~~~g~~dv~vkI~~cGIChsDlH~~~gdw---g~s~~PlV~GHEiaG~Vvkv   80 (360)
T KOG0023|consen    4 MSIPEKQFGWAARDPSGVLSPEVFSFPVREPGENDVLVKIEYCGVCHSDLHAWKGDW---GLSKYPLVPGHEIAGVVVKV   80 (360)
T ss_pred             ccCchhhEEEEEECCCCCCCcceeEcCCCCCCCCcEEEEEEEEeccchhHHHhhccC---CcccCCccCCceeeEEEEEE
Confidence            445677888888754   378889999999999999999999999999999998732   22688999999999999999


Q ss_pred             CCCCCCCCCCCEE-EEcCCcCCCCCccccCCCCCCCCCcccccc------CCCCcceeeEEeecCCceEECCCCCCcchh
Q 017868           89 GSEVKTLVPGDRV-ALEPGISCWRCDHCKGGRYNLCPEMKFFAT------PPVHGSLANQVVHPADLCFKLPDNVSLEEG  161 (365)
Q Consensus        89 G~~v~~~~~Gd~V-~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~------~~~~g~~~~~~~v~~~~~~~iP~~~~~~~a  161 (365)
                      |++|++|++|||| +.....+|+.|+||..+.+++|++.-+...      ..+.|+|++|+++++.++++||++++.+.|
T Consensus        81 Gs~V~~~kiGD~vGVg~~~~sC~~CE~C~~~~E~yCpk~~~t~~g~~~DGt~~~ggf~~~~~v~~~~a~kIP~~~pl~~a  160 (360)
T KOG0023|consen   81 GSNVTGFKIGDRVGVGWLNGSCLSCEYCKSGNENYCPKMHFTYNGVYHDGTITQGGFQEYAVVDEVFAIKIPENLPLASA  160 (360)
T ss_pred             CCCcccccccCeeeeeEEeccccCccccccCCcccCCceeEeccccccCCCCccCccceeEEEeeeeEEECCCCCChhhc
Confidence            9999999999999 557888999999999999999995444322      334677999999999999999999999999


Q ss_pred             ccch-hhHHHHHHHHhcCCCCCCEEEEEcCCHHHHHHHHHHHHHCCCCeEEEEeCCh-hHHHHHHHcCCCEEEeCCCCcc
Q 017868          162 AMCE-PLSVGLHACRRANIGPETNVLIMGAGPIGLVTMLGAPRAFGAPRIVIVDVDD-YRLSVAKEIGADNIVKVSTNLQ  239 (365)
Q Consensus       162 ~~~~-~~~~a~~~~~~~~~~~g~~vlI~G~g~~G~~ai~~l~~~~g~~~vi~v~~~~-~~~~~~~~~g~~~~~~~~~~~~  239 (365)
                      |.+. ...|+|.++...++.||+++.|.|+|++|.+++| +|+++|. +|+++++++ +|.+.++.||++..++..+ ++
T Consensus       161 APlLCaGITvYspLk~~g~~pG~~vgI~GlGGLGh~aVq-~AKAMG~-rV~vis~~~~kkeea~~~LGAd~fv~~~~-d~  237 (360)
T KOG0023|consen  161 APLLCAGITVYSPLKRSGLGPGKWVGIVGLGGLGHMAVQ-YAKAMGM-RVTVISTSSKKKEEAIKSLGADVFVDSTE-DP  237 (360)
T ss_pred             cchhhcceEEeehhHHcCCCCCcEEEEecCcccchHHHH-HHHHhCc-EEEEEeCCchhHHHHHHhcCcceeEEecC-CH
Confidence            9876 4557888899999999999999999779999999 9999999 578887776 7778889999999887532 34


Q ss_pred             cHHHHHHHHHHHhCCCceEEEeCCCCHHHHHHHHHhcccCCEEEEEccCCCCccccchHhhhcCcEEEeeccc-CCcHHH
Q 017868          240 DIAEEVEKIQKAMGTGIDVSFDCAGLNKTMSTALGATCAGGKVCLVGMGHHEMTVPLTPAAVREVDVVGVFRY-KNTWPL  318 (365)
Q Consensus       240 ~~~~~i~~~~~~~~~~~d~vid~~g~~~~~~~~~~~l~~~G~~~~~g~~~~~~~~~~~~~~~~~~~i~~~~~~-~~~~~~  318 (365)
                      ++   ++++.++...++|-|.+.  ....++.++..|+.+|+++++|.+.....++..++.++.+.|.|+... +.+.++
T Consensus       238 d~---~~~~~~~~dg~~~~v~~~--a~~~~~~~~~~lk~~Gt~V~vg~p~~~~~~~~~~lil~~~~I~GS~vG~~ket~E  312 (360)
T KOG0023|consen  238 DI---MKAIMKTTDGGIDTVSNL--AEHALEPLLGLLKVNGTLVLVGLPEKPLKLDTFPLILGRKSIKGSIVGSRKETQE  312 (360)
T ss_pred             HH---HHHHHHhhcCcceeeeec--cccchHHHHHHhhcCCEEEEEeCcCCcccccchhhhcccEEEEeeccccHHHHHH
Confidence            54   444444456777777765  344778999999999999999998878888889999999999999866 788999


Q ss_pred             HHHHHHcCCCCCCCceEEEecCChhhHHHHHHHHhcCCCceEEEEeC
Q 017868          319 CLELLRSGKIDVKPLVTHRFGFSQKEVEEAFETSARGGTAIKVMFNL  365 (365)
Q Consensus       319 ~~~~l~~g~~~~~~~~~~~~~~~~~~~~~a~~~~~~~~~~gk~vi~~  365 (365)
                      ++++..++.+  ++.+ +..++  +++++||+.+++++...+.|+++
T Consensus       313 ~Ldf~a~~~i--k~~I-E~v~~--~~v~~a~erm~kgdV~yRfVvD~  354 (360)
T KOG0023|consen  313 ALDFVARGLI--KSPI-ELVKL--SEVNEAYERMEKGDVRYRFVVDV  354 (360)
T ss_pred             HHHHHHcCCC--cCce-EEEeh--hHHHHHHHHHHhcCeeEEEEEEc
Confidence            9999999999  4444 55677  99999999999999999999874

>cd08281 liver_ADH_like1 Zinc-dependent alcohol dehydrogenases (ADH) and class III ADG (AKA formaldehyde dehydrogenase)

Probab=100.00  E-value=5.9e-50  Score=370.88  Aligned_cols=334  Identities=31%  Similarity=0.488  Sum_probs=285.4

Q ss_pred             ceeEEEec---------CCceEEEEecCCCCCCCcEEEEEeeeeeCcccHhhhhccccCCccCCCCcccCccceEEEEEe
Q 017868           18 NMAAWLLG---------VNTLKIQPFELPSLGPYDVLVRMKAVGICGSDVHYLKTLRCADFVVKEPMVIGHECAGVIEKV   88 (365)
Q Consensus        18 ~~~~~~~~---------~~~l~~~~~~~p~~~~~eVlI~v~~~~l~~~D~~~~~g~~~~~~~~~~p~~~G~e~~G~V~~v   88 (365)
                      |||+++..         ++.++++++|.|+|+++||+|||.++++|++|++.+.|..    ...+|.++|||++|+|+++
T Consensus         1 mka~~~~~~g~~~~~~~~~~l~~~~~~~P~~~~~evlV~v~~~gi~~~D~~~~~g~~----~~~~p~i~GhE~~G~V~~v   76 (371)
T cd08281           1 MRAAVLRETGAPTPYADSRPLVIEEVELDPPGPGEVLVKIAAAGLCHSDLSVINGDR----PRPLPMALGHEAAGVVVEV   76 (371)
T ss_pred             CcceEEEecccccccccCCCceEEEeecCCCCCCeEEEEEEEEeeCccchHhhcCCC----CCCCCccCCccceeEEEEe
Confidence            57777774         3679999999999999999999999999999999888743    2346899999999999999


Q ss_pred             CCCCCCCCCCCEEEEcCCcCCCCCccccCCCCCCCCCccccccC--------------------CCCcceeeEEeecCCc
Q 017868           89 GSEVKTLVPGDRVALEPGISCWRCDHCKGGRYNLCPEMKFFATP--------------------PVHGSLANQVVHPADL  148 (365)
Q Consensus        89 G~~v~~~~~Gd~V~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~--------------------~~~g~~~~~~~v~~~~  148 (365)
                      |+++++|++||||++.+..+|++|++|+.+++++|.........                    ...|+|+||+.+++.+
T Consensus        77 G~~v~~~~~GdrV~~~~~~~cg~c~~c~~g~~~~c~~~~~~~~~g~~~~g~~~~~~~~~~~~~~~g~G~~aey~~v~~~~  156 (371)
T cd08281          77 GEGVTDLEVGDHVVLVFVPSCGHCRPCAEGRPALCEPGAAANGAGTLLSGGRRLRLRGGEINHHLGVSAFAEYAVVSRRS  156 (371)
T ss_pred             CCCCCcCCCCCEEEEccCCCCCCCccccCCCcccccCccccccccccccCcccccccCcccccccCcccceeeEEecccc
Confidence            99999999999999988889999999999999999875332100                    0137999999999999


Q ss_pred             eEECCCCCCcchhccch-hhHHHHHHH-HhcCCCCCCEEEEEcCCHHHHHHHHHHHHHCCCCeEEEEeCChhHHHHHHHc
Q 017868          149 CFKLPDNVSLEEGAMCE-PLSVGLHAC-RRANIGPETNVLIMGAGPIGLVTMLGAPRAFGAPRIVIVDVDDYRLSVAKEI  226 (365)
Q Consensus       149 ~~~iP~~~~~~~a~~~~-~~~~a~~~~-~~~~~~~g~~vlI~G~g~~G~~ai~~l~~~~g~~~vi~v~~~~~~~~~~~~~  226 (365)
                      ++++|+++++++|+.++ ...+||+++ +.+++++|++|||.|+|++|++++| +++..|+++|++++++++|.++++++
T Consensus       157 ~~~lP~~l~~~~aa~~~~~~~ta~~~~~~~~~i~~g~~VlV~G~G~vG~~a~~-lak~~G~~~Vi~~~~~~~r~~~a~~~  235 (371)
T cd08281         157 VVKIDKDVPLEIAALFGCAVLTGVGAVVNTAGVRPGQSVAVVGLGGVGLSALL-GAVAAGASQVVAVDLNEDKLALAREL  235 (371)
T ss_pred             eEECCCCCChHHhhhhcchHHHHHHHHHhccCCCCCCEEEEECCCHHHHHHHH-HHHHcCCCcEEEEcCCHHHHHHHHHc
Confidence            99999999999999886 678899886 5688999999999999999999999 99999997788999999999999999


Q ss_pred             CCCEEEeCCCCcccHHHHHHHHHHHhCCCceEEEeCCCCHHHHHHHHHhcccCCEEEEEccCCC--CccccchHhhhcCc
Q 017868          227 GADNIVKVSTNLQDIAEEVEKIQKAMGTGIDVSFDCAGLNKTMSTALGATCAGGKVCLVGMGHH--EMTVPLTPAAVREV  304 (365)
Q Consensus       227 g~~~~~~~~~~~~~~~~~i~~~~~~~~~~~d~vid~~g~~~~~~~~~~~l~~~G~~~~~g~~~~--~~~~~~~~~~~~~~  304 (365)
                      |++.++++.  .+++.+.+++.+   ++++|++|||+|....+..++++++++|+++.+|....  ...++...+..+++
T Consensus       236 Ga~~~i~~~--~~~~~~~i~~~~---~~g~d~vid~~G~~~~~~~~~~~l~~~G~iv~~G~~~~~~~~~~~~~~~~~~~~  310 (371)
T cd08281         236 GATATVNAG--DPNAVEQVRELT---GGGVDYAFEMAGSVPALETAYEITRRGGTTVTAGLPDPEARLSVPALSLVAEER  310 (371)
T ss_pred             CCceEeCCC--chhHHHHHHHHh---CCCCCEEEECCCChHHHHHHHHHHhcCCEEEEEccCCCCceeeecHHHHhhcCC
Confidence            999887753  356666666653   34899999999987788999999999999999986532  23455556788999


Q ss_pred             EEEeeccc----CCcHHHHHHHHHcCCCCCCCceEEEecCChhhHHHHHHHHhcCCCceEEEE
Q 017868          305 DVVGVFRY----KNTWPLCLELLRSGKIDVKPLVTHRFGFSQKEVEEAFETSARGGTAIKVMF  363 (365)
Q Consensus       305 ~i~~~~~~----~~~~~~~~~~l~~g~~~~~~~~~~~~~~~~~~~~~a~~~~~~~~~~gk~vi  363 (365)
                      ++.+++..    .+.+.++++++++|++.+.++++++|+|  +++.+|++.+++++..+|+|+
T Consensus       311 ~i~g~~~~~~~~~~~~~~~~~l~~~g~i~~~~~i~~~~~l--~~~~~A~~~~~~~~~~~~vi~  371 (371)
T cd08281         311 TLKGSYMGSCVPRRDIPRYLALYLSGRLPVDKLLTHRLPL--DEINEGFDRLAAGEAVRQVIL  371 (371)
T ss_pred             EEEEEecCCCChHHHHHHHHHHHHcCCCCchhheeeeecH--HHHHHHHHHHhCCCceeeeeC
Confidence            99998754    4678899999999999877788999999  999999999999988888764

NAD(P)(H)-dependent oxidoreductases are the major enzymes in the interconversion of alcohols and aldehydes or ketones. This group contains members identified as zinc dependent alcohol dehydrogenases (ADH), and class III ADG (aka formaldehyde dehydrogenase, FDH). Alcohol dehydrogenase in the liver converts ethanol and NAD+ to acetaldehyde and NADH, while in yeast and some other microorganisms ADH catalyzes the conversion acetaldehyde to ethanol in alcoholic fermentation. NAD(P)(H)-dependent oxidoreductases are the major enzymes in the interconversion of alcohols and aldehydes or ketones. Alcohol dehydrogenase in the liver converts ethanol and NAD+ to acetaldehyde and NADH, while in yeast and some other microorganisms ADH catalyzes the conversion acetaldehyde to ethanol in alcoholic fermentation. Class III ADH are also know as glutathione-dependent formaldehyde dehyd

>PLN02740 Alcohol dehydrogenase-like

Probab=100.00  E-value=7.3e-50  Score=371.23  Aligned_cols=343  Identities=25%  Similarity=0.413  Sum_probs=286.7

Q ss_pred             chhcceeEEEecCC-ceEEEEecCCCCCCCcEEEEEeeeeeCcccHhhhhccccCCccCCCCcccCccceEEEEEeCCCC
Q 017868           14 GEEVNMAAWLLGVN-TLKIQPFELPSLGPYDVLVRMKAVGICGSDVHYLKTLRCADFVVKEPMVIGHECAGVIEKVGSEV   92 (365)
Q Consensus        14 ~~~~~~~~~~~~~~-~l~~~~~~~p~~~~~eVlI~v~~~~l~~~D~~~~~g~~~~~~~~~~p~~~G~e~~G~V~~vG~~v   92 (365)
                      .+.+|+++++.+++ ++.++++|.|.|+++||+|||.++++|++|++.+.|....  ...+|.++|||++|+|+++|+++
T Consensus         7 ~~~~mka~~~~~~~~~~~~~e~~~P~~~~~eVlV~v~~~gic~sD~~~~~g~~~~--~~~~p~i~GhE~~G~V~~vG~~v   84 (381)
T PLN02740          7 KVITCKAAVAWGPGEPLVMEEIRVDPPQKMEVRIKILYTSICHTDLSAWKGENEA--QRAYPRILGHEAAGIVESVGEGV   84 (381)
T ss_pred             cceeeEEEEEecCCCCcEEEEeeCCCCCCCeEEEEEEEEecChhhHHHhCCCCcc--cCCCCccccccceEEEEEeCCCC
Confidence            45679999999875 5899999999999999999999999999999998875321  13568999999999999999999


Q ss_pred             CCCCCCCEEEEcCCcCCCCCccccCCCCCCCCCcccccc-----------------------CCCCcceeeEEeecCCce
Q 017868           93 KTLVPGDRVALEPGISCWRCDHCKGGRYNLCPEMKFFAT-----------------------PPVHGSLANQVVHPADLC  149 (365)
Q Consensus        93 ~~~~~Gd~V~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-----------------------~~~~g~~~~~~~v~~~~~  149 (365)
                      ++|++||||++.+..+|++|++|..+.++.|.+....+.                       ....|+|+||++++++++
T Consensus        85 ~~~~vGdrV~~~~~~~cg~C~~c~~g~~~~C~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~G~~aey~~v~~~~~  164 (381)
T PLN02740         85 EDLKAGDHVIPIFNGECGDCRYCKRDKTNLCETYRVDPFKSVMVNDGKTRFSTKGDGQPIYHFLNTSTFTEYTVLDSACV  164 (381)
T ss_pred             CcCCCCCEEEecCCCCCCCChhhcCCCcccccCccccccccccccCCCcccccccCCCcccccccCccceeEEEEehHHe
Confidence            999999999999999999999999999999997643211                       002589999999999999


Q ss_pred             EECCCCCCcchhccch-hhHHHHHHH-HhcCCCCCCEEEEEcCCHHHHHHHHHHHHHCCCCeEEEEeCChhHHHHHHHcC
Q 017868          150 FKLPDNVSLEEGAMCE-PLSVGLHAC-RRANIGPETNVLIMGAGPIGLVTMLGAPRAFGAPRIVIVDVDDYRLSVAKEIG  227 (365)
Q Consensus       150 ~~iP~~~~~~~a~~~~-~~~~a~~~~-~~~~~~~g~~vlI~G~g~~G~~ai~~l~~~~g~~~vi~v~~~~~~~~~~~~~g  227 (365)
                      +++|+++++++++.++ .+.+||+++ +.+++++|++|||+|+|++|++++| +++.+|+++|++++++++|.++++++|
T Consensus       165 ~~iP~~~~~~~aa~l~~~~~ta~~~~~~~~~~~~g~~VlV~G~G~vG~~a~q-~ak~~G~~~Vi~~~~~~~r~~~a~~~G  243 (381)
T PLN02740        165 VKIDPNAPLKKMSLLSCGVSTGVGAAWNTANVQAGSSVAIFGLGAVGLAVAE-GARARGASKIIGVDINPEKFEKGKEMG  243 (381)
T ss_pred             EECCCCCCHHHhhhhcccchhhHHHHHhccCCCCCCEEEEECCCHHHHHHHH-HHHHCCCCcEEEEcCChHHHHHHHHcC
Confidence            9999999999988776 678899886 5688999999999999999999999 999999977899999999999999999


Q ss_pred             CCEEEeCCCCcccHHHHHHHHHHHhCCCceEEEeCCCCHHHHHHHHHhcccC-CEEEEEccCCCCccccchHh-hhcCcE
Q 017868          228 ADNIVKVSTNLQDIAEEVEKIQKAMGTGIDVSFDCAGLNKTMSTALGATCAG-GKVCLVGMGHHEMTVPLTPA-AVREVD  305 (365)
Q Consensus       228 ~~~~~~~~~~~~~~~~~i~~~~~~~~~~~d~vid~~g~~~~~~~~~~~l~~~-G~~~~~g~~~~~~~~~~~~~-~~~~~~  305 (365)
                      ++.++++...+.++.+.+++.+   ++++|++||++|....+..++.+++++ |+++.+|.......++.... ..++++
T Consensus       244 a~~~i~~~~~~~~~~~~v~~~~---~~g~dvvid~~G~~~~~~~a~~~~~~g~G~~v~~G~~~~~~~~~~~~~~~~~~~~  320 (381)
T PLN02740        244 ITDFINPKDSDKPVHERIREMT---GGGVDYSFECAGNVEVLREAFLSTHDGWGLTVLLGIHPTPKMLPLHPMELFDGRS  320 (381)
T ss_pred             CcEEEecccccchHHHHHHHHh---CCCCCEEEECCCChHHHHHHHHhhhcCCCEEEEEccCCCCceecccHHHHhcCCe
Confidence            9988876543345666666654   338999999999877889999999886 99999986543222222222 346888


Q ss_pred             EEeeccc----CCcHHHHHHHHHcCCCCCCCceEEEecCChhhHHHHHHHHhcCCCceEEEEeC
Q 017868          306 VVGVFRY----KNTWPLCLELLRSGKIDVKPLVTHRFGFSQKEVEEAFETSARGGTAIKVMFNL  365 (365)
Q Consensus       306 i~~~~~~----~~~~~~~~~~l~~g~~~~~~~~~~~~~~~~~~~~~a~~~~~~~~~~gk~vi~~  365 (365)
                      +.|++..    ...+.++++++.++.+.+.+.++++|+|  +++++|++.+.+++. .|++|.+
T Consensus       321 i~g~~~~~~~~~~~~~~~~~~~~~g~i~~~~~it~~~~l--~e~~~A~~~~~~~~~-~k~~~~~  381 (381)
T PLN02740        321 ITGSVFGDFKGKSQLPNLAKQCMQGVVNLDGFITHELPF--EKINEAFQLLEDGKA-LRCLLHL  381 (381)
T ss_pred             EEEEecCCCCcHHHHHHHHHHHHcCCCChHHheeEEecH--HHHHHHHHHHHCCCc-eeEEEeC
Confidence            8887543    2468899999999999777788999999  999999999988754 6999864

>PLN02827 Alcohol dehydrogenase-like

Probab=100.00  E-value=9.6e-50  Score=369.41  Aligned_cols=346  Identities=22%  Similarity=0.387  Sum_probs=288.7

Q ss_pred             CccccccchhcceeEEEecCC-ceEEEEecCCCCCCCcEEEEEeeeeeCcccHhhhhccccCCccCCCCcccCccceEEE
Q 017868            7 SQGEKEDGEEVNMAAWLLGVN-TLKIQPFELPSLGPYDVLVRMKAVGICGSDVHYLKTLRCADFVVKEPMVIGHECAGVI   85 (365)
Q Consensus         7 ~~~~~~~~~~~~~~~~~~~~~-~l~~~~~~~p~~~~~eVlI~v~~~~l~~~D~~~~~g~~~~~~~~~~p~~~G~e~~G~V   85 (365)
                      |+++.......|+++++.++. .++++++|.|+|+++||+|||.++++|++|++.+.+.      ..+|.++|||++|+|
T Consensus         2 ~~~~~~~~~~~mka~~~~~~~~~~~~~e~~~P~~~~~eVlVkv~~~gic~sD~~~~~g~------~~~p~i~GhE~~G~V   75 (378)
T PLN02827          2 SSSISQPNVITCRAAVAWGAGEALVMEEVEVSPPQPLEIRIKVVSTSLCRSDLSAWESQ------ALFPRIFGHEASGIV   75 (378)
T ss_pred             CccccCcccceeEEEEEecCCCCceEEEeecCCCCCCEEEEEEEEEecChhHHHHhcCC------CCCCeeecccceEEE
Confidence            345555566779999998764 7999999999999999999999999999999887653      145789999999999


Q ss_pred             EEeCCCCCCCCCCCEEEEcCCcCCCCCccccCCCCCCCCCcccccc-------------C-------CCCcceeeEEeec
Q 017868           86 EKVGSEVKTLVPGDRVALEPGISCWRCDHCKGGRYNLCPEMKFFAT-------------P-------PVHGSLANQVVHP  145 (365)
Q Consensus        86 ~~vG~~v~~~~~Gd~V~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-------------~-------~~~g~~~~~~~v~  145 (365)
                      +++|+++++|++||||++.+..+|++|.+|+.+.+++|.+......             .       ...|+|+||+.++
T Consensus        76 ~~vG~~v~~~~~GdrV~~~~~~~cg~C~~C~~g~~~~C~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~~G~~aeyv~v~  155 (378)
T PLN02827         76 ESIGEGVTEFEKGDHVLTVFTGECGSCRHCISGKSNMCQVLGLERKGVMHSDQKTRFSIKGKPVYHYCAVSSFSEYTVVH  155 (378)
T ss_pred             EEcCCCCcccCCCCEEEEecCCCCCCChhhhCcCcccccCccccccccccCCCcccccccCcccccccccccceeeEEec
Confidence            9999999999999999999889999999999999999987532110             0       0248999999999


Q ss_pred             CCceEECCCCCCcchhccch-hhHHHHHHH-HhcCCCCCCEEEEEcCCHHHHHHHHHHHHHCCCCeEEEEeCChhHHHHH
Q 017868          146 ADLCFKLPDNVSLEEGAMCE-PLSVGLHAC-RRANIGPETNVLIMGAGPIGLVTMLGAPRAFGAPRIVIVDVDDYRLSVA  223 (365)
Q Consensus       146 ~~~~~~iP~~~~~~~a~~~~-~~~~a~~~~-~~~~~~~g~~vlI~G~g~~G~~ai~~l~~~~g~~~vi~v~~~~~~~~~~  223 (365)
                      +..++++|+++++++++.+. .+.++++++ +.+++++|++|||+|+|++|++++| +++.+|++.|++++++++|.+++
T Consensus       156 ~~~~~~iP~~l~~~~aa~l~~~~~~a~~~~~~~~~~~~g~~VlV~G~G~vG~~~iq-lak~~G~~~vi~~~~~~~~~~~a  234 (378)
T PLN02827        156 SGCAVKVDPLAPLHKICLLSCGVAAGLGAAWNVADVSKGSSVVIFGLGTVGLSVAQ-GAKLRGASQIIGVDINPEKAEKA  234 (378)
T ss_pred             hhheEECCCCCCHHHhhhhcchhHhhHHHHHhhcCCCCCCEEEEECCCHHHHHHHH-HHHHcCCCeEEEECCCHHHHHHH
Confidence            99999999999999888775 566788766 5578999999999999999999999 99999997788888899999999


Q ss_pred             HHcCCCEEEeCCCCcccHHHHHHHHHHHhCCCceEEEeCCCCHHHHHHHHHhcccC-CEEEEEccCCCCccccc-hHhhh
Q 017868          224 KEIGADNIVKVSTNLQDIAEEVEKIQKAMGTGIDVSFDCAGLNKTMSTALGATCAG-GKVCLVGMGHHEMTVPL-TPAAV  301 (365)
Q Consensus       224 ~~~g~~~~~~~~~~~~~~~~~i~~~~~~~~~~~d~vid~~g~~~~~~~~~~~l~~~-G~~~~~g~~~~~~~~~~-~~~~~  301 (365)
                      +++|++.++++....+++.+.+++.+   ++++|++||++|....+..+++.++++ |+++.+|.......+.. ..+..
T Consensus       235 ~~lGa~~~i~~~~~~~~~~~~v~~~~---~~g~d~vid~~G~~~~~~~~l~~l~~g~G~iv~~G~~~~~~~~~~~~~~~~  311 (378)
T PLN02827        235 KTFGVTDFINPNDLSEPIQQVIKRMT---GGGADYSFECVGDTGIATTALQSCSDGWGLTVTLGVPKAKPEVSAHYGLFL  311 (378)
T ss_pred             HHcCCcEEEcccccchHHHHHHHHHh---CCCCCEEEECCCChHHHHHHHHhhccCCCEEEEECCcCCCccccccHHHHh
Confidence            99999988875443345666666653   348999999999877888999999998 99999987543333333 34677


Q ss_pred             cCcEEEeeccc----CCcHHHHHHHHHcCCCCCCCceEEEecCChhhHHHHHHHHhcCCCceEEEEeC
Q 017868          302 REVDVVGVFRY----KNTWPLCLELLRSGKIDVKPLVTHRFGFSQKEVEEAFETSARGGTAIKVMFNL  365 (365)
Q Consensus       302 ~~~~i~~~~~~----~~~~~~~~~~l~~g~~~~~~~~~~~~~~~~~~~~~a~~~~~~~~~~gk~vi~~  365 (365)
                      +++++.|++..    ...+.+++++++++.+.+.+.++++|+|  +++.+|++.+++++. .|.||.+
T Consensus       312 ~~~~i~g~~~~~~~~~~~~~~~~~~~~~g~i~~~~~i~~~~~l--e~~~~A~~~~~~~~~-~k~vi~~  376 (378)
T PLN02827        312 SGRTLKGSLFGGWKPKSDLPSLVDKYMNKEIMIDEFITHNLSF--DEINKAFELMREGKC-LRCVIHM  376 (378)
T ss_pred             cCceEEeeecCCCchhhhHHHHHHHHHcCCCChHHheEEEecH--HHHHHHHHHHHCCCc-eEEEEEe
Confidence            99999987653    3468899999999999666688999999  999999999998865 6999874

>COG1063 Tdh Threonine dehydrogenase and related Zn-dependent dehydrogenases [Amino acid transport and metabolism / General function prediction only]

Probab=100.00  E-value=1.7e-49  Score=362.08  Aligned_cols=337  Identities=36%  Similarity=0.594  Sum_probs=278.7

Q ss_pred             ceeEEEecCC-ceEEEEecCCCCCCCcEEEEEeeeeeCcccHhhhhccccCCccCCCCc-ccCccceEEEEEeCCCCCCC
Q 017868           18 NMAAWLLGVN-TLKIQPFELPSLGPYDVLVRMKAVGICGSDVHYLKTLRCADFVVKEPM-VIGHECAGVIEKVGSEVKTL   95 (365)
Q Consensus        18 ~~~~~~~~~~-~l~~~~~~~p~~~~~eVlI~v~~~~l~~~D~~~~~g~~~~~~~~~~p~-~~G~e~~G~V~~vG~~v~~~   95 (365)
                      |+++++..+. ..++++.+.|.+.|+||+|||.++|||.+|++.+.|....   ...|. ++|||++|+|+++| .++.+
T Consensus         1 m~a~~~~~~~~~~~~~~~~~p~~~p~~vlVkv~~~gICGSDlh~~~g~~~~---~~~~~~i~GHE~~G~V~evG-~~~~~   76 (350)
T COG1063           1 MKAAVVYVGGGDVRLEEPPPPIPGPGDVLIRVTATGICGSDLHIYRGGEPF---VPPGDIILGHEFVGEVVEVG-VVRGF   76 (350)
T ss_pred             CceeEEEecCCccccccCCCCCCCCCeEEEEEEEEeEchhhhhhccCCCCC---CCCCCcccCccceEEEEEec-cccCC
Confidence            5677777665 4448888888789999999999999999999999875322   23344 89999999999999 77889


Q ss_pred             CCCCEEEEcCCcCCCCCccccCCCCCCCCCccccccC----CCCcceeeEEeecCCceEE-CCCCCCcchhccchhhHHH
Q 017868           96 VPGDRVALEPGISCWRCDHCKGGRYNLCPEMKFFATP----PVHGSLANQVVHPADLCFK-LPDNVSLEEGAMCEPLSVG  170 (365)
Q Consensus        96 ~~Gd~V~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~----~~~g~~~~~~~v~~~~~~~-iP~~~~~~~a~~~~~~~~a  170 (365)
                      ++||||++.+..+|++|++|+.+.+++|++..+.+..    +.+|+|+||+++|.+++++ +|+++++++|++.++++++
T Consensus        77 ~~GdrVvv~~~~~Cg~C~~C~~G~~~~C~~~~~~g~~~~~~~~~G~~aEyv~vp~~~~~~~~pd~~~~~~aal~epla~~  156 (350)
T COG1063          77 KVGDRVVVEPNIPCGHCRYCRAGEYNLCENPGFYGYAGLGGGIDGGFAEYVRVPADFNLAKLPDGIDEEAAALTEPLATA  156 (350)
T ss_pred             CCCCEEEECCCcCCCCChhHhCcCcccCCCccccccccccCCCCCceEEEEEeccccCeecCCCCCChhhhhhcChhhhh
Confidence            9999999999999999999999999999976655542    2679999999999765555 5787788888888999999


Q ss_pred             HHHH-HhcCCCCCCEEEEEcCCHHHHHHHHHHHHHCCCCeEEEEeCChhHHHHHHH-cCCCEEEeCCCCcccHHHHHHHH
Q 017868          171 LHAC-RRANIGPETNVLIMGAGPIGLVTMLGAPRAFGAPRIVIVDVDDYRLSVAKE-IGADNIVKVSTNLQDIAEEVEKI  248 (365)
Q Consensus       171 ~~~~-~~~~~~~g~~vlI~G~g~~G~~ai~~l~~~~g~~~vi~v~~~~~~~~~~~~-~g~~~~~~~~~~~~~~~~~i~~~  248 (365)
                      +++. .....+++++|+|+|+|++|+++++ +++.+|+..|++++.+++|++++++ .+++.+.+...  ++....+.+.
T Consensus       157 ~~~~a~~~~~~~~~~V~V~GaGpIGLla~~-~a~~~Ga~~Viv~d~~~~Rl~~A~~~~g~~~~~~~~~--~~~~~~~~~~  233 (350)
T COG1063         157 YHGHAERAAVRPGGTVVVVGAGPIGLLAIA-LAKLLGASVVIVVDRSPERLELAKEAGGADVVVNPSE--DDAGAEILEL  233 (350)
T ss_pred             hhhhhhccCCCCCCEEEEECCCHHHHHHHH-HHHHcCCceEEEeCCCHHHHHHHHHhCCCeEeecCcc--ccHHHHHHHH
Confidence            8773 4444566669999999999999999 9999999999999999999999999 55555444221  2444455444


Q ss_pred             HHHhCCCceEEEeCCCCHHHHHHHHHhcccCCEEEEEccCCCCc-cccchHhhhcCcEEEeecc-c-CCcHHHHHHHHHc
Q 017868          249 QKAMGTGIDVSFDCAGLNKTMSTALGATCAGGKVCLVGMGHHEM-TVPLTPAAVREVDVVGVFR-Y-KNTWPLCLELLRS  325 (365)
Q Consensus       249 ~~~~~~~~d~vid~~g~~~~~~~~~~~l~~~G~~~~~g~~~~~~-~~~~~~~~~~~~~i~~~~~-~-~~~~~~~~~~l~~  325 (365)
                      +  .+.++|++|||+|....+.+++++++++|+++.+|...... .++...+..+++++.|+.. . ...++.+++++.+
T Consensus       234 t--~g~g~D~vie~~G~~~~~~~ai~~~r~gG~v~~vGv~~~~~~~~~~~~~~~kel~l~gs~~~~~~~~~~~~~~ll~~  311 (350)
T COG1063         234 T--GGRGADVVIEAVGSPPALDQALEALRPGGTVVVVGVYGGEDIPLPAGLVVSKELTLRGSLRPSGREDFERALDLLAS  311 (350)
T ss_pred             h--CCCCCCEEEECCCCHHHHHHHHHHhcCCCEEEEEeccCCccCccCHHHHHhcccEEEeccCCCCcccHHHHHHHHHc
Confidence            3  25689999999999888999999999999999999876655 4666778999999999965 3 5689999999999


Q ss_pred             CCCCCCCceEEEecCChhhHHHHHHHHhcCCC-ceEEEEeC
Q 017868          326 GKIDVKPLVTHRFGFSQKEVEEAFETSARGGT-AIKVMFNL  365 (365)
Q Consensus       326 g~~~~~~~~~~~~~~~~~~~~~a~~~~~~~~~-~gk~vi~~  365 (365)
                      |++++.+++++.+++  +++++||+.+.+... ..|+++.+
T Consensus       312 g~i~~~~lit~~~~~--~~~~~a~~~~~~~~~~~~Kv~i~~  350 (350)
T COG1063         312 GKIDPEKLITHRLPL--DDAAEAYELFADRKEEAIKVVLKP  350 (350)
T ss_pred             CCCChhHceEeeccH--HHHHHHHHHHHhcCCCeEEEEecC
Confidence            999988888999887  999999999987533 67998864

>KOG0022 consensus Alcohol dehydrogenase, class III [Secondary metabolites biosynthesis, transport and catabolism]

Probab=100.00  E-value=1.2e-49  Score=335.65  Aligned_cols=342  Identities=25%  Similarity=0.391  Sum_probs=293.8

Q ss_pred             chhcceeEEEecC-CceEEEEecCCCCCCCcEEEEEeeeeeCcccHhhhhccccCCccCCCCcccCccceEEEEEeCCCC
Q 017868           14 GEEVNMAAWLLGV-NTLKIQPFELPSLGPYDVLVRMKAVGICGSDVHYLKTLRCADFVVKEPMVIGHECAGVIEKVGSEV   92 (365)
Q Consensus        14 ~~~~~~~~~~~~~-~~l~~~~~~~p~~~~~eVlI~v~~~~l~~~D~~~~~g~~~~~~~~~~p~~~G~e~~G~V~~vG~~v   92 (365)
                      ...+.+|++.-++ .+|.++++..++|+.+||+||+.++++|.+|...+.|..   ....+|.++|||++|+|+++|.+|
T Consensus         4 kvI~CKAAV~w~a~~PL~IEei~V~pPka~EVRIKI~~t~vCHTD~~~~~g~~---~~~~fP~IlGHEaaGIVESvGegV   80 (375)
T KOG0022|consen    4 KVITCKAAVAWEAGKPLVIEEIEVAPPKAHEVRIKILATGVCHTDAYVWSGKD---PEGLFPVILGHEAAGIVESVGEGV   80 (375)
T ss_pred             CceEEeEeeeccCCCCeeEEEEEeCCCCCceEEEEEEEEeeccccceeecCCC---ccccCceEecccceeEEEEecCCc
Confidence            4567899998875 699999999999999999999999999999999998754   235789999999999999999999


Q ss_pred             CCCCCCCEEEEcCCcCCCCCccccCCCCCCCCCcccccc---------------------CCCCcceeeEEeecCCceEE
Q 017868           93 KTLVPGDRVALEPGISCWRCDHCKGGRYNLCPEMKFFAT---------------------PPVHGSLANQVVHPADLCFK  151 (365)
Q Consensus        93 ~~~~~Gd~V~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~---------------------~~~~g~~~~~~~v~~~~~~~  151 (365)
                      +++++||+|++.+...|++|.+|+.+..|+|........                     .....+|+||.+++...+++
T Consensus        81 ~~vk~GD~Viplf~p~CgeCk~C~s~ktNlC~~~~~~~~~~~~~~DgtSRF~~~gk~iyHfmg~StFsEYTVv~~~~v~k  160 (375)
T KOG0022|consen   81 TTVKPGDHVIPLFTPQCGECKFCKSPKTNLCEKFRADNGKGGMPYDGTSRFTCKGKPIYHFMGTSTFSEYTVVDDISVAK  160 (375)
T ss_pred             cccCCCCEEeeccccCCCCcccccCCCCChhhhhcccccccccccCCceeeeeCCCceEEecccccceeEEEeecceeEe
Confidence            999999999999999999999999999999964443321                     01124899999999999999


Q ss_pred             CCCCCCcchhccch-hhHHHHHHH-HhcCCCCCCEEEEEcCCHHHHHHHHHHHHHCCCCeEEEEeCChhHHHHHHHcCCC
Q 017868          152 LPDNVSLEEGAMCE-PLSVGLHAC-RRANIGPETNVLIMGAGPIGLVTMLGAPRAFGAPRIVIVDVDDYRLSVAKEIGAD  229 (365)
Q Consensus       152 iP~~~~~~~a~~~~-~~~~a~~~~-~~~~~~~g~~vlI~G~g~~G~~ai~~l~~~~g~~~vi~v~~~~~~~~~~~~~g~~  229 (365)
                      |++..+++.++++. ..+|+|-|. +.+++++|+++.|+|.|++|+++++ -|+..|+.++|++|-+++|.+.+++||++
T Consensus       161 Id~~aPl~kvcLLgCGvsTG~GAa~~~Akv~~GstvAVfGLG~VGLav~~-Gaka~GAsrIIgvDiN~~Kf~~ak~fGaT  239 (375)
T KOG0022|consen  161 IDPSAPLEKVCLLGCGVSTGYGAAWNTAKVEPGSTVAVFGLGGVGLAVAM-GAKAAGASRIIGVDINPDKFEKAKEFGAT  239 (375)
T ss_pred             cCCCCChhheeEeeccccccchhhhhhcccCCCCEEEEEecchHHHHHHH-hHHhcCcccEEEEecCHHHHHHHHhcCcc
Confidence            99999999999996 788899875 7899999999999999999999999 99999999999999999999999999999


Q ss_pred             EEEeCCCCcccHHHHHHHHHHHhCCCceEEEeCCCCHHHHHHHHHhcccC-CEEEEEccCCCCccccchHh-hhcCcEEE
Q 017868          230 NIVKVSTNLQDIAEEVEKIQKAMGTGIDVSFDCAGLNKTMSTALGATCAG-GKVCLVGMGHHEMTVPLTPA-AVREVDVV  307 (365)
Q Consensus       230 ~~~~~~~~~~~~~~~i~~~~~~~~~~~d~vid~~g~~~~~~~~~~~l~~~-G~~~~~g~~~~~~~~~~~~~-~~~~~~i~  307 (365)
                      +.+|-.+......+.|++++   ++++|+.|||+|....+.+++.+...+ |..+.+|.......+..+++ .+++.++.
T Consensus       240 e~iNp~d~~~~i~evi~EmT---dgGvDysfEc~G~~~~m~~al~s~h~GwG~sv~iGv~~~~~~i~~~p~~l~~GR~~~  316 (375)
T KOG0022|consen  240 EFINPKDLKKPIQEVIIEMT---DGGVDYSFECIGNVSTMRAALESCHKGWGKSVVIGVAAAGQEISTRPFQLVTGRTWK  316 (375)
T ss_pred             eecChhhccccHHHHHHHHh---cCCceEEEEecCCHHHHHHHHHHhhcCCCeEEEEEecCCCcccccchhhhccccEEE
Confidence            99875422223445555554   689999999999999999999999888 99999997765555555553 45566666


Q ss_pred             eecc----cCCcHHHHHHHHHcCCCCCCCceEEEecCChhhHHHHHHHHhcCCCceEEEEeC
Q 017868          308 GVFR----YKNTWPLCLELLRSGKIDVKPLVTHRFGFSQKEVEEAFETSARGGTAIKVMFNL  365 (365)
Q Consensus       308 ~~~~----~~~~~~~~~~~l~~g~~~~~~~~~~~~~~~~~~~~~a~~~~~~~~~~gk~vi~~  365 (365)
                      |+..    .+.++..+++.+.++++++...++|.++|  +++++||+.|.+++.. +.|+.+
T Consensus       317 Gs~FGG~K~~~~iP~lV~~y~~~~l~ld~~ITh~l~f--~~In~AF~ll~~Gksi-R~vl~~  375 (375)
T KOG0022|consen  317 GSAFGGFKSKSDIPKLVKDYMKKKLNLDEFITHELPF--EEINKAFDLLHEGKSI-RCVLWM  375 (375)
T ss_pred             EEecccccchhhhhHHHHHHHhCccchhhhhhcccCH--HHHHHHHHHHhCCceE-EEEEeC
Confidence            6543    37789999999999999999999999999  9999999999999665 777653

>TIGR03451 mycoS_dep_FDH mycothiol-dependent formaldehyde dehydrogenase

Probab=100.00  E-value=1e-48  Score=361.10  Aligned_cols=337  Identities=28%  Similarity=0.469  Sum_probs=284.5

Q ss_pred             cceeEEEecCC-ceEEEEecCCCCCCCcEEEEEeeeeeCcccHhhhhccccCCccCCCCcccCccceEEEEEeCCCCCCC
Q 017868           17 VNMAAWLLGVN-TLKIQPFELPSLGPYDVLVRMKAVGICGSDVHYLKTLRCADFVVKEPMVIGHECAGVIEKVGSEVKTL   95 (365)
Q Consensus        17 ~~~~~~~~~~~-~l~~~~~~~p~~~~~eVlI~v~~~~l~~~D~~~~~g~~~~~~~~~~p~~~G~e~~G~V~~vG~~v~~~   95 (365)
                      +||++++.+.+ +++++++|.|.|+++||+|||.++++|++|++...|...    ..+|.++|||++|+|+++|+++++|
T Consensus         1 ~mka~~~~~~~~~~~~~~~~~p~~~~~evlV~v~~~gi~~~D~~~~~g~~~----~~~p~i~G~e~~G~V~~vG~~v~~~   76 (358)
T TIGR03451         1 TVRGVIARSKGAPVELETIVVPDPGPGEVIVDIQACGVCHTDLHYREGGIN----DEFPFLLGHEAAGVVEAVGEGVTDV   76 (358)
T ss_pred             CcEEEEEccCCCCCEEEEEECCCCCCCeEEEEEEEEeecHHHHHHhcCCcc----ccCCcccccceEEEEEEeCCCCccc
Confidence            58999999764 699999999999999999999999999999998876421    3468899999999999999999999


Q ss_pred             CCCCEEEEcCCcCCCCCccccCCCCCCCCCcccc--------cc----CCCCcceeeEEeecCCceEECCCCCCcchhcc
Q 017868           96 VPGDRVALEPGISCWRCDHCKGGRYNLCPEMKFF--------AT----PPVHGSLANQVVHPADLCFKLPDNVSLEEGAM  163 (365)
Q Consensus        96 ~~Gd~V~~~~~~~~~~~~~~~~~~~~~~~~~~~~--------~~----~~~~g~~~~~~~v~~~~~~~iP~~~~~~~a~~  163 (365)
                      ++||||++.+...|+.|.+|+.+++++|......        +.    ....|+|+||+.+++++++++|+++++++|+.
T Consensus        77 ~~GdrV~~~~~~~cg~c~~c~~g~~~~c~~~~~~~~~~~~~~g~~~~~~~~~G~~aey~~v~~~~~~~ip~~~~~~~aa~  156 (358)
T TIGR03451        77 APGDYVVLNWRAVCGQCRACKRGRPWYCFDTHNATQKMTLTDGTELSPALGIGAFAEKTLVHAGQCTKVDPAADPAAAGL  156 (358)
T ss_pred             CCCCEEEEccCCCCCCChHHhCcCcccCcCccccccccccccCcccccccccccccceEEEehhheEECCCCCChhHhhh
Confidence            9999999999999999999999999999742110        00    01359999999999999999999999999888


Q ss_pred             ch-hhHHHHHHH-HhcCCCCCCEEEEEcCCHHHHHHHHHHHHHCCCCeEEEEeCChhHHHHHHHcCCCEEEeCCCCcccH
Q 017868          164 CE-PLSVGLHAC-RRANIGPETNVLIMGAGPIGLVTMLGAPRAFGAPRIVIVDVDDYRLSVAKEIGADNIVKVSTNLQDI  241 (365)
Q Consensus       164 ~~-~~~~a~~~~-~~~~~~~g~~vlI~G~g~~G~~ai~~l~~~~g~~~vi~v~~~~~~~~~~~~~g~~~~~~~~~~~~~~  241 (365)
                      ++ .+.+||+++ +.+++++|++|||+|+|++|++++| +++..|+++|++++++++|.++++++|++.++++.+  +++
T Consensus       157 l~~~~~ta~~~~~~~~~~~~g~~VlV~G~g~vG~~a~~-~ak~~G~~~Vi~~~~~~~~~~~~~~~Ga~~~i~~~~--~~~  233 (358)
T TIGR03451       157 LGCGVMAGLGAAVNTGGVKRGDSVAVIGCGGVGDAAIA-GAALAGASKIIAVDIDDRKLEWAREFGATHTVNSSG--TDP  233 (358)
T ss_pred             hcccchhhHHHHHhccCCCCCCEEEEECCCHHHHHHHH-HHHHcCCCeEEEEcCCHHHHHHHHHcCCceEEcCCC--cCH
Confidence            76 567788776 5678999999999999999999999 999999977899999999999999999998887543  566


Q ss_pred             HHHHHHHHHHhCCCceEEEeCCCCHHHHHHHHHhcccCCEEEEEccCCCC--ccccchHhhhcCcEEEeeccc----CCc
Q 017868          242 AEEVEKIQKAMGTGIDVSFDCAGLNKTMSTALGATCAGGKVCLVGMGHHE--MTVPLTPAAVREVDVVGVFRY----KNT  315 (365)
Q Consensus       242 ~~~i~~~~~~~~~~~d~vid~~g~~~~~~~~~~~l~~~G~~~~~g~~~~~--~~~~~~~~~~~~~~i~~~~~~----~~~  315 (365)
                      .+.+++.+.  +.++|++|||+|.+..+..++.+++++|+++.+|.....  ..++...+..+++++.+.+..    .+.
T Consensus       234 ~~~i~~~~~--~~g~d~vid~~g~~~~~~~~~~~~~~~G~iv~~G~~~~~~~~~~~~~~~~~~~~~i~~~~~~~~~~~~~  311 (358)
T TIGR03451       234 VEAIRALTG--GFGADVVIDAVGRPETYKQAFYARDLAGTVVLVGVPTPDMTLELPLLDVFGRGGALKSSWYGDCLPERD  311 (358)
T ss_pred             HHHHHHHhC--CCCCCEEEECCCCHHHHHHHHHHhccCCEEEEECCCCCCceeeccHHHHhhcCCEEEEeecCCCCcHHH
Confidence            666666542  568999999999877889999999999999999865332  334445577788999887532    467


Q ss_pred             HHHHHHHHHcCCCCCCCceEEEecCChhhHHHHHHHHhcCCCceEEEEeC
Q 017868          316 WPLCLELLRSGKIDVKPLVTHRFGFSQKEVEEAFETSARGGTAIKVMFNL  365 (365)
Q Consensus       316 ~~~~~~~l~~g~~~~~~~~~~~~~~~~~~~~~a~~~~~~~~~~gk~vi~~  365 (365)
                      ++++++++++|.+.+.+.++++|++  +++.+|++.+++++.. |+++.+
T Consensus       312 ~~~~~~l~~~g~l~~~~~i~~~~~l--~~~~~A~~~~~~~~~~-k~~~~~  358 (358)
T TIGR03451       312 FPMLVDLYLQGRLPLDAFVTERIGL--DDVEEAFDKMHAGDVL-RSVVEL  358 (358)
T ss_pred             HHHHHHHHHcCCCCchheEEEEecH--HHHHHHHHHHhCCCcc-eeEEeC
Confidence            8899999999999777788999999  9999999999888665 777753

Members of this protein family are mycothiol-dependent formaldehyde dehydrogenase (EC 1.2.1.66). This protein is found, so far, only in the Actinobacteria (Mycobacterium sp., Streptomyces sp., Corynebacterium sp., and related species), where mycothione replaces glutathione.

>PRK10309 galactitol-1-phosphate dehydrogenase; Provisional

Probab=100.00  E-value=1.8e-48  Score=358.32  Aligned_cols=335  Identities=29%  Similarity=0.525  Sum_probs=284.5

Q ss_pred             ceeEEEecCCceEEEEecCCCC-CCCcEEEEEeeeeeCcccHhhhhccccCCccCCCCcccCccceEEEEEeCCCCCCCC
Q 017868           18 NMAAWLLGVNTLKIQPFELPSL-GPYDVLVRMKAVGICGSDVHYLKTLRCADFVVKEPMVIGHECAGVIEKVGSEVKTLV   96 (365)
Q Consensus        18 ~~~~~~~~~~~l~~~~~~~p~~-~~~eVlI~v~~~~l~~~D~~~~~g~~~~~~~~~~p~~~G~e~~G~V~~vG~~v~~~~   96 (365)
                      ||++++.+++.+++.++|.|+| .++||+|||.++++|++|+..+...  +.  ..+|.++|||++|+|+++|+++++|+
T Consensus         1 Mka~~~~~~~~~~~~~~~~P~~~~~~evlV~v~~~gi~~~D~~~~~~~--~~--~~~p~i~G~e~~G~V~~vG~~v~~~~   76 (347)
T PRK10309          1 MKSVVNDTDGIVRVAESPIPEIKHQDDVLVKVASSGLCGSDIPRIFKN--GA--HYYPITLGHEFSGYVEAVGSGVDDLH   76 (347)
T ss_pred             CceEEEeCCCceEEEECCCCCCCCCCEEEEEEEEEEEchhcHHHHhCC--CC--CCCCcccccceEEEEEEeCCCCCCCC
Confidence            5788888888999999999998 5999999999999999998754321  11  23578999999999999999999999


Q ss_pred             CCCEEEEcCCcCCCCCccccCCCCCCCCCccccccCCCCcceeeEEeecCCceEECCCCCCcchhccchhhHHHHHHHHh
Q 017868           97 PGDRVALEPGISCWRCDHCKGGRYNLCPEMKFFATPPVHGSLANQVVHPADLCFKLPDNVSLEEGAMCEPLSVGLHACRR  176 (365)
Q Consensus        97 ~Gd~V~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~v~~~~~~~iP~~~~~~~a~~~~~~~~a~~~~~~  176 (365)
                      +||||++.+..+|++|++|+.+.+++|......+. ...|+|+||+.++++.++++|+++++++|+.++++++++++++.
T Consensus        77 vGd~V~~~~~~~c~~c~~c~~g~~~~c~~~~~~g~-~~~G~~aey~~v~~~~~~~lP~~~s~~~aa~~~~~~~~~~~~~~  155 (347)
T PRK10309         77 PGDAVACVPLLPCFTCPECLRGFYSLCAKYDFIGS-RRDGGNAEYIVVKRKNLFALPTDMPIEDGAFIEPITVGLHAFHL  155 (347)
T ss_pred             CCCEEEECCCcCCCCCcchhCcCcccCCCcceecc-CCCCccceeEEeehHHeEECcCCCCHHHhhhhhHHHHHHHHHHh
Confidence            99999999999999999999999999987665554 35799999999999999999999999999988667778888877


Q ss_pred             cCCCCCCEEEEEcCCHHHHHHHHHHHHHCCCCeEEEEeCChhHHHHHHHcCCCEEEeCCCCcccHHHHHHHHHHHhCCCc
Q 017868          177 ANIGPETNVLIMGAGPIGLVTMLGAPRAFGAPRIVIVDVDDYRLSVAKEIGADNIVKVSTNLQDIAEEVEKIQKAMGTGI  256 (365)
Q Consensus       177 ~~~~~g~~vlI~G~g~~G~~ai~~l~~~~g~~~vi~v~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~i~~~~~~~~~~~  256 (365)
                      ..+++|++|||+|+|++|++++| +++.+|+++++++++++++.++++++|++.++++++  .+ .+.+.+.+.  +.++
T Consensus       156 ~~~~~g~~vlV~G~g~vG~~~~~-~a~~~G~~~v~~~~~~~~~~~~~~~~Ga~~~i~~~~--~~-~~~~~~~~~--~~~~  229 (347)
T PRK10309        156 AQGCEGKNVIIIGAGTIGLLAIQ-CAVALGAKSVTAIDINSEKLALAKSLGAMQTFNSRE--MS-APQIQSVLR--ELRF  229 (347)
T ss_pred             cCCCCCCEEEEECCCHHHHHHHH-HHHHcCCCeEEEECCCHHHHHHHHHcCCceEecCcc--cC-HHHHHHHhc--CCCC
Confidence            88899999999999999999999 999999977888889999999999999988877543  23 344554432  5678


Q ss_pred             e-EEEeCCCCHHHHHHHHHhcccCCEEEEEccCCCCcccc---chHhhhcCcEEEeeccc------CCcHHHHHHHHHcC
Q 017868          257 D-VSFDCAGLNKTMSTALGATCAGGKVCLVGMGHHEMTVP---LTPAAVREVDVVGVFRY------KNTWPLCLELLRSG  326 (365)
Q Consensus       257 d-~vid~~g~~~~~~~~~~~l~~~G~~~~~g~~~~~~~~~---~~~~~~~~~~i~~~~~~------~~~~~~~~~~l~~g  326 (365)
                      | ++|||+|....+..++++++++|+++.+|.......++   ...+..+++++.+++..      .+.++++++++++|
T Consensus       230 d~~v~d~~G~~~~~~~~~~~l~~~G~iv~~G~~~~~~~~~~~~~~~~~~~~~~i~g~~~~~~~~~~~~~~~~~~~~~~~g  309 (347)
T PRK10309        230 DQLILETAGVPQTVELAIEIAGPRAQLALVGTLHHDLHLTSATFGKILRKELTVIGSWMNYSSPWPGQEWETASRLLTER  309 (347)
T ss_pred             CeEEEECCCCHHHHHHHHHHhhcCCEEEEEccCCCCcccChhhhhHHhhcCcEEEEEeccccCCcchhHHHHHHHHHHcC
Confidence            8 99999998878899999999999999998654332222   23467788999987643      25688999999999


Q ss_pred             CCCCCCceEEEecCChhhHHHHHHHHhcCCCceEEEEeC
Q 017868          327 KIDVKPLVTHRFGFSQKEVEEAFETSARGGTAIKVMFNL  365 (365)
Q Consensus       327 ~~~~~~~~~~~~~~~~~~~~~a~~~~~~~~~~gk~vi~~  365 (365)
                      .+.+.+.++++|+|  +++.+|++.+.++...||+|+++
T Consensus       310 ~i~~~~~i~~~~~l--~~~~~A~~~~~~~~~~gKvvv~~  346 (347)
T PRK10309        310 KLSLEPLIAHRGSF--ESFAQAVRDLAGNPMPGKVLLQI  346 (347)
T ss_pred             CCCchhheEEEeeH--HHHHHHHHHHhcCCcceEEEEeC
Confidence            99878889999999  99999999999988889999874

>TIGR02819 fdhA_non_GSH formaldehyde dehydrogenase, glutathione-independent

Probab=100.00  E-value=2.1e-48  Score=360.99  Aligned_cols=336  Identities=23%  Similarity=0.428  Sum_probs=268.9

Q ss_pred             ceeEEEecCCceEEEEecCCCCC-------CCcEEEEEeeeeeCcccHhhhhccccCCccCCCCcccCccceEEEEEeCC
Q 017868           18 NMAAWLLGVNTLKIQPFELPSLG-------PYDVLVRMKAVGICGSDVHYLKTLRCADFVVKEPMVIGHECAGVIEKVGS   90 (365)
Q Consensus        18 ~~~~~~~~~~~l~~~~~~~p~~~-------~~eVlI~v~~~~l~~~D~~~~~g~~~~~~~~~~p~~~G~e~~G~V~~vG~   90 (365)
                      |+++++.++++++++++|.|+|+       ++||||||.++|||++|++.+.|..    ...+|.++|||++|+|+++|+
T Consensus         3 mka~v~~~~~~~~~~e~~~P~~~~~~~~~~~~eVlVkv~a~gIcgsD~~~~~g~~----~~~~p~i~GhE~~G~V~~vG~   78 (393)
T TIGR02819         3 NRGVVYLGPGKVEVQDIDYPKLELPDGRKCEHGVILKVVTTNICGSDQHMVRGRT----TAPTGLVLGHEITGEVIEKGR   78 (393)
T ss_pred             ceEEEEecCCceeEEeccCCcccCCCccCCCCeEEEEEEEeeecHHHHHHHCCCC----CCCCCccccceeEEEEEEEcC
Confidence            78899998889999999999874       6899999999999999999887642    235689999999999999999


Q ss_pred             CCCCCCCCCEEEEcCCcCCCCCccccCCCCCCCCCcc------ccccC---CCCcceeeEEeecCC--ceEECCCCCCc-
Q 017868           91 EVKTLVPGDRVALEPGISCWRCDHCKGGRYNLCPEMK------FFATP---PVHGSLANQVVHPAD--LCFKLPDNVSL-  158 (365)
Q Consensus        91 ~v~~~~~Gd~V~~~~~~~~~~~~~~~~~~~~~~~~~~------~~~~~---~~~g~~~~~~~v~~~--~~~~iP~~~~~-  158 (365)
                      +|++|++||||++.+..+|++|++|+.+++++|.+..      +++..   ..+|+|+||+.+++.  +++++|++++. 
T Consensus        79 ~V~~~~vGdrV~~~~~~~Cg~C~~C~~g~~~~C~~~~~~~~~~~~g~~~~~~~~G~~aey~~v~~~~~~l~~vP~~~~~~  158 (393)
T TIGR02819        79 DVEFIKIGDIVSVPFNIACGRCRNCKEGHTGVCLNVNPARAGAAYGYVDMGGWVGGQSEYVMVPYADFNLLKFPDRDQAL  158 (393)
T ss_pred             ccccccCCCEEEEecccCCCCChHHHCcCcccCcCCCCCCccceecccccCCCCCceEEEEEechhhCceEECCCccccc
Confidence            9999999999999999999999999999999999743      12221   236999999999964  79999998653 


Q ss_pred             ---chhcc-chhhHHHHHHHHhcCCCCCCEEEEEcCCHHHHHHHHHHHHHCCCCeEEEEeCChhHHHHHHHcCCCEEEeC
Q 017868          159 ---EEGAM-CEPLSVGLHACRRANIGPETNVLIMGAGPIGLVTMLGAPRAFGAPRIVIVDVDDYRLSVAKEIGADNIVKV  234 (365)
Q Consensus       159 ---~~a~~-~~~~~~a~~~~~~~~~~~g~~vlI~G~g~~G~~ai~~l~~~~g~~~vi~v~~~~~~~~~~~~~g~~~~~~~  234 (365)
                         ..++. ..++.++|++++..++++|++|||.|+|++|++++| +++.+|++++++++.+++|.++++++|++. +++
T Consensus       159 ~~~~~~a~l~~~~~ta~~a~~~~~~~~g~~VlV~G~G~iG~~aiq-lAk~~Ga~~vi~~d~~~~r~~~a~~~Ga~~-v~~  236 (393)
T TIGR02819       159 EKIRDLTMLSDIFPTGYHGAVTAGVGPGSTVYIAGAGPVGLAAAA-SAQLLGAAVVIVGDLNPARLAQARSFGCET-VDL  236 (393)
T ss_pred             ccccceeeeccHHHHHHHHHHhcCCCCCCEEEEECCCHHHHHHHH-HHHHcCCceEEEeCCCHHHHHHHHHcCCeE-Eec
Confidence               23333 358889999998888999999999988999999999 999999987777778889999999999974 443


Q ss_pred             CCCcccHHHHHHHHHHHhCCCceEEEeCCCCH--------------HHHHHHHHhcccCCEEEEEccCC-CCc-c-----
Q 017868          235 STNLQDIAEEVEKIQKAMGTGIDVSFDCAGLN--------------KTMSTALGATCAGGKVCLVGMGH-HEM-T-----  293 (365)
Q Consensus       235 ~~~~~~~~~~i~~~~~~~~~~~d~vid~~g~~--------------~~~~~~~~~l~~~G~~~~~g~~~-~~~-~-----  293 (365)
                      . ...++.+.+.+++.  +.++|++||++|.+              ..+..++++++++|+++.+|... ... .     
T Consensus       237 ~-~~~~~~~~v~~~~~--~~g~Dvvid~~G~~~~~~~~~~~~~~~~~~~~~~~~~~~~~G~i~~~G~~~~~~~~~~~~~~  313 (393)
T TIGR02819       237 S-KDATLPEQIEQILG--EPEVDCAVDCVGFEARGHGHDGKKEAPATVLNSLMEVTRVGGAIGIPGLYVTEDPGAVDAAA  313 (393)
T ss_pred             C-CcccHHHHHHHHcC--CCCCcEEEECCCCccccccccccccchHHHHHHHHHHhhCCCEEEEeeecCCcccccccccc
Confidence            2 22456566665532  56899999999975              47899999999999999999752 111 1     


Q ss_pred             ------ccchHhhhcCcEEEeecccC-CcHHHHHHHHHcCCCCCCCceE-EEecCChhhHHHHHHHHhcCCCceEEEEeC
Q 017868          294 ------VPLTPAAVREVDVVGVFRYK-NTWPLCLELLRSGKIDVKPLVT-HRFGFSQKEVEEAFETSARGGTAIKVMFNL  365 (365)
Q Consensus       294 ------~~~~~~~~~~~~i~~~~~~~-~~~~~~~~~l~~g~~~~~~~~~-~~~~~~~~~~~~a~~~~~~~~~~gk~vi~~  365 (365)
                            +.....+.+++++.+..... +.+.++++++++|++++.++++ ++|+|  +++.+||+.+.+++ .+|++|++
T Consensus       314 ~~~~~~i~~~~~~~~~~~i~g~~~~~~~~~~~~~~~~~~g~i~~~~~i~~~~~~l--~~~~~a~~~~~~~~-~~Kvvi~~  390 (393)
T TIGR02819       314 KTGSLSIRFGLGWAKSHSFHTGQTPVMKYNRNLMQAILHDRVQIAKAVNVTVISL--DDAPEGYAEFDAGA-AKKFVIDP  390 (393)
T ss_pred             cccccccchHHhhccCceEEeccCChhhhHHHHHHHHHcCCCCHHHceecceecH--HHHHHHHHHHhhCC-ceEEEEeC
Confidence                  11222344556666543332 3347899999999997766666 78999  99999999998874 58999864

Members of this family represent a distinct clade within the larger family of zinc-dependent dehydrogenases of medium chain alcohols, a family that also includes the so-called glutathione-dependent formaldehyde dehydrogenase. Members of this protein family have a tightly bound NAD that can act as a true cofactor, rather than a cosubstrate in dehydrogenase reactions, in dismutase reactions for some aldehydes. The name given to this family, however, is formaldehyde dehydrogenase, glutathione-independent.

>TIGR02818 adh_III_F_hyde S-(hydroxymethyl)glutathione dehydrogenase/class III alcohol dehydrogenase

Probab=100.00  E-value=5.3e-48  Score=357.11  Aligned_cols=337  Identities=26%  Similarity=0.405  Sum_probs=277.6

Q ss_pred             ceeEEEecC-CceEEEEecCCCCCCCcEEEEEeeeeeCcccHhhhhccccCCccCCCCcccCccceEEEEEeCCCCCCCC
Q 017868           18 NMAAWLLGV-NTLKIQPFELPSLGPYDVLVRMKAVGICGSDVHYLKTLRCADFVVKEPMVIGHECAGVIEKVGSEVKTLV   96 (365)
Q Consensus        18 ~~~~~~~~~-~~l~~~~~~~p~~~~~eVlI~v~~~~l~~~D~~~~~g~~~~~~~~~~p~~~G~e~~G~V~~vG~~v~~~~   96 (365)
                      |+++++... ..++++++|.|+|.++||+|||.++++|++|++...|....   ..+|.++|||++|+|+++|+++++|+
T Consensus         2 ~~a~~~~~~~~~l~~~~~~~P~~~~~eVlI~v~a~gi~~sD~~~~~g~~~~---~~~p~i~GhE~~G~V~~vG~~v~~~~   78 (368)
T TIGR02818         2 SRAAVAWAAGQPLKIEEVDVEMPQKGEVLVRIVATGVCHTDAFTLSGADPE---GVFPVILGHEGAGIVEAVGEGVTSVK   78 (368)
T ss_pred             ceEEEEecCCCCeEEEEecCCCCCCCeEEEEEEEecccHHHHHHhcCCCCC---CCCCeeeccccEEEEEEECCCCccCC
Confidence            677777754 57999999999999999999999999999999988775321   35689999999999999999999999


Q ss_pred             CCCEEEEcCCcCCCCCccccCCCCCCCCCcccc---cc-----------------CCCCcceeeEEeecCCceEECCCCC
Q 017868           97 PGDRVALEPGISCWRCDHCKGGRYNLCPEMKFF---AT-----------------PPVHGSLANQVVHPADLCFKLPDNV  156 (365)
Q Consensus        97 ~Gd~V~~~~~~~~~~~~~~~~~~~~~~~~~~~~---~~-----------------~~~~g~~~~~~~v~~~~~~~iP~~~  156 (365)
                      +||||++.+..+|++|.+|+.+.+++|.+....   +.                 ....|+|+||+.+++++++++|+++
T Consensus        79 ~GdrV~~~~~~~cg~C~~c~~g~~~~C~~~~~~~~~g~~~~~~~~~~~~g~~~~~~~~~G~~aey~~v~~~~~~~lP~~l  158 (368)
T TIGR02818        79 VGDHVIPLYTAECGECKFCLSGKTNLCVAVRETQGKGLMPDGTSRFSKDGQPIYHYMGCSTFSEYTVVPEISLAKINPAA  158 (368)
T ss_pred             CCCEEEEcCCCCCCCChhhhCCCcccccCcccccccccccCCccccccCCCcccccccCccceeeEEechhheEECCCCC
Confidence            999999999999999999999999999864310   00                 0024799999999999999999999


Q ss_pred             Ccchhccch-hhHHHHHHH-HhcCCCCCCEEEEEcCCHHHHHHHHHHHHHCCCCeEEEEeCChhHHHHHHHcCCCEEEeC
Q 017868          157 SLEEGAMCE-PLSVGLHAC-RRANIGPETNVLIMGAGPIGLVTMLGAPRAFGAPRIVIVDVDDYRLSVAKEIGADNIVKV  234 (365)
Q Consensus       157 ~~~~a~~~~-~~~~a~~~~-~~~~~~~g~~vlI~G~g~~G~~ai~~l~~~~g~~~vi~v~~~~~~~~~~~~~g~~~~~~~  234 (365)
                      ++++++.++ ++.+||+++ +.+++++|++|||+|+|++|++++| +|+.+|+++|++++.+++|.++++++|++.++++
T Consensus       159 ~~~~aa~l~~~~~ta~~a~~~~~~~~~g~~VlV~G~G~iG~~a~q-~Ak~~G~~~Vi~~~~~~~~~~~a~~~Ga~~~i~~  237 (368)
T TIGR02818       159 PLEEVCLLGCGVTTGIGAVLNTAKVEEGDTVAVFGLGGIGLSVIQ-GARMAKASRIIAIDINPAKFELAKKLGATDCVNP  237 (368)
T ss_pred             CHHHhhhhcchhHHHHHHHHHhcCCCCCCEEEEECCCHHHHHHHH-HHHHcCCCeEEEEcCCHHHHHHHHHhCCCeEEcc
Confidence            999999886 788999987 5688999999999999999999999 9999999778999999999999999999988875


Q ss_pred             CCCcccHHHHHHHHHHHhCCCceEEEeCCCCHHHHHHHHHhcccC-CEEEEEccCCC--CccccchHhhhcCcEEEeecc
Q 017868          235 STNLQDIAEEVEKIQKAMGTGIDVSFDCAGLNKTMSTALGATCAG-GKVCLVGMGHH--EMTVPLTPAAVREVDVVGVFR  311 (365)
Q Consensus       235 ~~~~~~~~~~i~~~~~~~~~~~d~vid~~g~~~~~~~~~~~l~~~-G~~~~~g~~~~--~~~~~~~~~~~~~~~i~~~~~  311 (365)
                      .+..+++.+.+++++   ++++|++||++|.+..+..++++++++ |+++.+|....  ...+....+. +...+.++..
T Consensus       238 ~~~~~~~~~~v~~~~---~~g~d~vid~~G~~~~~~~~~~~~~~~~G~~v~~g~~~~~~~~~~~~~~~~-~~~~~~g~~~  313 (368)
T TIGR02818       238 NDYDKPIQEVIVEIT---DGGVDYSFECIGNVNVMRAALECCHKGWGESIIIGVAGAGQEISTRPFQLV-TGRVWRGSAF  313 (368)
T ss_pred             cccchhHHHHHHHHh---CCCCCEEEECCCCHHHHHHHHHHhhcCCCeEEEEeccCCCCcccccHHHHh-ccceEEEeec
Confidence            432345556666554   348999999999877888999999886 99999986432  2222222222 2344666543


Q ss_pred             c----CCcHHHHHHHHHcCCCCCCCceEEEecCChhhHHHHHHHHhcCCCceEEEEeC
Q 017868          312 Y----KNTWPLCLELLRSGKIDVKPLVTHRFGFSQKEVEEAFETSARGGTAIKVMFNL  365 (365)
Q Consensus       312 ~----~~~~~~~~~~l~~g~~~~~~~~~~~~~~~~~~~~~a~~~~~~~~~~gk~vi~~  365 (365)
                      .    ...+.+++++++++.+.+.++++++|+|  +++.+|++.++++. ..|++|++
T Consensus       314 ~~~~~~~~~~~~~~~~~~g~i~~~~~it~~~~l--~~~~~A~~~~~~~~-~~k~~v~~  368 (368)
T TIGR02818       314 GGVKGRTELPGIVEQYMKGEIALDDFVTHTMPL--EDINEAFDLMHEGK-SIRTVIHY  368 (368)
T ss_pred             cCCCcHHHHHHHHHHHHCCCCCchhheeEEecH--HHHHHHHHHHhCCC-ceeEEeeC
Confidence            2    3468899999999999877889999999  99999999998774 47999874

The members of this protein family show dual function. First, they remove formaldehyde, a toxic metabolite, by acting as S-(hydroxymethyl)glutathione dehydrogenase (1.1.1.284). S-(hydroxymethyl)glutathione can form spontaneously from formaldehyde and glutathione, and so this enzyme previously was designated glutathione-dependent formaldehyde dehydrogenase. These same proteins are also designated alcohol dehydrogenase (EC 1.1.1.1) of class III, for activities that do not require glutathione; they tend to show poor activity for ethanol among their various substrate alcohols.

>cd08301 alcohol_DH_plants Plant alcohol dehydrogenase

Probab=100.00  E-value=9e-48  Score=356.34  Aligned_cols=338  Identities=25%  Similarity=0.442  Sum_probs=281.1

Q ss_pred             cceeEEEecC-CceEEEEecCCCCCCCcEEEEEeeeeeCcccHhhhhccccCCccCCCCcccCccceEEEEEeCCCCCCC
Q 017868           17 VNMAAWLLGV-NTLKIQPFELPSLGPYDVLVRMKAVGICGSDVHYLKTLRCADFVVKEPMVIGHECAGVIEKVGSEVKTL   95 (365)
Q Consensus        17 ~~~~~~~~~~-~~l~~~~~~~p~~~~~eVlI~v~~~~l~~~D~~~~~g~~~~~~~~~~p~~~G~e~~G~V~~vG~~v~~~   95 (365)
                      +|+++++... ++++++++|.|+|+++||+|||.++++|++|++.+.|...   ...+|.++|||++|+|+++|+++++|
T Consensus         2 ~~ka~~~~~~~~~~~l~~~~~p~~~~~evlIkv~a~gi~~~D~~~~~g~~~---~~~~p~i~G~e~~G~V~~vG~~v~~~   78 (369)
T cd08301           2 TCKAAVAWEAGKPLVIEEVEVAPPQAMEVRIKILHTSLCHTDVYFWEAKGQ---TPLFPRILGHEAAGIVESVGEGVTDL   78 (369)
T ss_pred             ccEEEEEecCCCCcEEEEeeCCCCCCCeEEEEEEEEeeCchhHHHhcCCCC---CCCCCcccccccceEEEEeCCCCCcc
Confidence            6889998864 5799999999999999999999999999999998877532   23568899999999999999999999


Q ss_pred             CCCCEEEEcCCcCCCCCccccCCCCCCCCCcccc---cc--------------C----CCCcceeeEEeecCCceEECCC
Q 017868           96 VPGDRVALEPGISCWRCDHCKGGRYNLCPEMKFF---AT--------------P----PVHGSLANQVVHPADLCFKLPD  154 (365)
Q Consensus        96 ~~Gd~V~~~~~~~~~~~~~~~~~~~~~~~~~~~~---~~--------------~----~~~g~~~~~~~v~~~~~~~iP~  154 (365)
                      ++||||++.+..+|++|.+|+.+.++.|.+....   +.              .    ...|+|+||+.+++.+++++|+
T Consensus        79 ~~GdrV~~~~~~~c~~c~~c~~g~~~~c~~~~~~~~~g~~~~~~~~~~~~~g~~~~~~~~~G~~aey~~v~~~~~~~iP~  158 (369)
T cd08301          79 KPGDHVLPVFTGECKECRHCKSEKSNMCDLLRINTDRGVMINDGKSRFSINGKPIYHFVGTSTFSEYTVVHVGCVAKINP  158 (369)
T ss_pred             ccCCEEEEccCCCCCCCchhcCCCcccCcCcccccccccccCCCccccccCCcceeeeeccccceeEEEEecccEEECCC
Confidence            9999999999999999999999999999875432   00              0    0248899999999999999999


Q ss_pred             CCCcchhccch-hhHHHHHHH-HhcCCCCCCEEEEEcCCHHHHHHHHHHHHHCCCCeEEEEeCChhHHHHHHHcCCCEEE
Q 017868          155 NVSLEEGAMCE-PLSVGLHAC-RRANIGPETNVLIMGAGPIGLVTMLGAPRAFGAPRIVIVDVDDYRLSVAKEIGADNIV  232 (365)
Q Consensus       155 ~~~~~~a~~~~-~~~~a~~~~-~~~~~~~g~~vlI~G~g~~G~~ai~~l~~~~g~~~vi~v~~~~~~~~~~~~~g~~~~~  232 (365)
                      ++++++++.++ .+.+||+++ +..++++|++|||+|+|++|++++| +++.+|+.+|+++++++++.++++++|++.++
T Consensus       159 ~~~~~~aa~~~~~~~ta~~~~~~~~~~~~g~~VlV~G~g~vG~~a~q-~ak~~G~~~vi~~~~~~~~~~~~~~~Ga~~~i  237 (369)
T cd08301         159 EAPLDKVCLLSCGVSTGLGAAWNVAKVKKGSTVAIFGLGAVGLAVAE-GARIRGASRIIGVDLNPSKFEQAKKFGVTEFV  237 (369)
T ss_pred             CCCHHHhhhhcchhhHHHHHHHhhcCCCCCCEEEEECCCHHHHHHHH-HHHHcCCCeEEEEcCCHHHHHHHHHcCCceEE
Confidence            99999988876 677888876 5688999999999999999999999 99999997789999999999999999998887


Q ss_pred             eCCCCcccHHHHHHHHHHHhCCCceEEEeCCCCHHHHHHHHHhcccC-CEEEEEccCCCCccccchH-hhhcCcEEEeec
Q 017868          233 KVSTNLQDIAEEVEKIQKAMGTGIDVSFDCAGLNKTMSTALGATCAG-GKVCLVGMGHHEMTVPLTP-AAVREVDVVGVF  310 (365)
Q Consensus       233 ~~~~~~~~~~~~i~~~~~~~~~~~d~vid~~g~~~~~~~~~~~l~~~-G~~~~~g~~~~~~~~~~~~-~~~~~~~i~~~~  310 (365)
                      ++....+++.+.+++..   ++++|++||++|....+..++.+++++ |+++.+|.......+.... ...+++++.+++
T Consensus       238 ~~~~~~~~~~~~v~~~~---~~~~d~vid~~G~~~~~~~~~~~~~~~~g~~v~~g~~~~~~~~~~~~~~~~~~~~i~g~~  314 (369)
T cd08301         238 NPKDHDKPVQEVIAEMT---GGGVDYSFECTGNIDAMISAFECVHDGWGVTVLLGVPHKDAVFSTHPMNLLNGRTLKGTL  314 (369)
T ss_pred             cccccchhHHHHHHHHh---CCCCCEEEECCCChHHHHHHHHHhhcCCCEEEEECcCCCCcccccCHHHHhcCCeEEEEe
Confidence            75432234555565553   348999999999877888999999996 9999998754322222222 234788998875


Q ss_pred             cc----CCcHHHHHHHHHcCCCCCCCceEEEecCChhhHHHHHHHHhcCCCceEEEEe
Q 017868          311 RY----KNTWPLCLELLRSGKIDVKPLVTHRFGFSQKEVEEAFETSARGGTAIKVMFN  364 (365)
Q Consensus       311 ~~----~~~~~~~~~~l~~g~~~~~~~~~~~~~~~~~~~~~a~~~~~~~~~~gk~vi~  364 (365)
                      ..    +..++++++++.++.+.+.+.++++|+|  +++.+|++.+++++. .|++|.
T Consensus       315 ~~~~~~~~~~~~~~~~~~~g~~~~~~~i~~~~~l--~~~~~A~~~~~~~~~-~k~~~~  369 (369)
T cd08301         315 FGGYKPKTDLPNLVEKYMKKELELEKFITHELPF--SEINKAFDLLLKGEC-LRCILH  369 (369)
T ss_pred             cCCCChHHHHHHHHHHHHcCCCCcHHheeeeecH--HHHHHHHHHHHCCCc-eeEEeC
Confidence            43    3468899999999999777788899999  999999999998865 488873

NAD(P)(H)-dependent oxidoreductases are the major enzymes in the interconversion of alcohols and aldehydes or ketones. Alcohol dehydrogenase in the liver converts ethanol and NAD+ to acetaldehyde and NADH, while in yeast and some other microorganisms ADH catalyzes the conversion acetaldehyde to ethanol in alcoholic fermentation. There are 7 vertebrate ADH 7 classes, 6 of which have been identified in humans. Class III, glutathione-dependent formaldehyde dehydrogenase, has been identified as the primordial form and exists in diverse species, including plants, micro-organisms, vertebrates, and invertebrates. Class I, typified by liver dehydrogenase, is an evolving form. Gene duplication and functional specialization of ADH into ADH classes and subclasses created numerous forms in vertebrates. For example, the A, B and C (formerly alpha, beta, gamma) human class I subunits have high overall structural similarity, but differ in the

>COG0604 Qor NADPH:quinone reductase and related Zn-dependent oxidoreductases [Energy production and conversion / General function prediction only]

Probab=100.00  E-value=4.1e-48  Score=348.31  Aligned_cols=310  Identities=32%  Similarity=0.430  Sum_probs=258.6

Q ss_pred             ceeEEEec---CCceEEEEecCCCCCCCcEEEEEeeeeeCcccHhhhhccccCCccCCCCcccCccceEEEEEeCCCCCC
Q 017868           18 NMAAWLLG---VNTLKIQPFELPSLGPYDVLVRMKAVGICGSDVHYLKTLRCADFVVKEPMVIGHECAGVIEKVGSEVKT   94 (365)
Q Consensus        18 ~~~~~~~~---~~~l~~~~~~~p~~~~~eVlI~v~~~~l~~~D~~~~~g~~~~~~~~~~p~~~G~e~~G~V~~vG~~v~~   94 (365)
                      |+++++..   ++.+++.++|.|.|+++||+|||+++++||.|.....|.  .....+.|.++|.|++|+|+++|++|+.
T Consensus         1 mka~~~~~~g~~~~l~~~e~~~P~p~~geVlVrV~a~gvN~~D~~~r~G~--~~~~~~~P~i~G~d~aG~V~avG~~V~~   78 (326)
T COG0604           1 MKAVVVEEFGGPEVLKVVEVPEPEPGPGEVLVRVKAAGVNPIDVLVRQGL--APPVRPLPFIPGSEAAGVVVAVGSGVTG   78 (326)
T ss_pred             CeEEEEeccCCCceeEEEecCCCCCCCCeEEEEEEEeecChHHHHhccCC--CCCCCCCCCcccceeEEEEEEeCCCCCC
Confidence            56777663   345999999999999999999999999999999999885  1222568999999999999999999999


Q ss_pred             CCCCCEEEEcCCcCCCCCccccCCCCCCCCCccccccCCCCcceeeEEeecCCceEECCCCCCcchhccch-hhHHHHHH
Q 017868           95 LVPGDRVALEPGISCWRCDHCKGGRYNLCPEMKFFATPPVHGSLANQVVHPADLCFKLPDNVSLEEGAMCE-PLSVGLHA  173 (365)
Q Consensus        95 ~~~Gd~V~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~v~~~~~~~iP~~~~~~~a~~~~-~~~~a~~~  173 (365)
                      |++||||+... ..                        ...|+|+||+.+++++++++|+++++++|++++ ...|||++
T Consensus        79 ~~~GdrV~~~~-~~------------------------~~~G~~AEy~~v~a~~~~~~P~~ls~~eAAal~~~~~TA~~~  133 (326)
T COG0604          79 FKVGDRVAALG-GV------------------------GRDGGYAEYVVVPADWLVPLPDGLSFEEAAALPLAGLTAWLA  133 (326)
T ss_pred             cCCCCEEEEcc-CC------------------------CCCCcceeEEEecHHHceeCCCCCCHHHHHHHHHHHHHHHHH
Confidence            99999998863 00                        035999999999999999999999999999997 88899999


Q ss_pred             HH-hcCCCCCCEEEEEcC-CHHHHHHHHHHHHHCCCCeEEEEeCChhHHHHHHHcCCCEEEeCCCCcccHHHHHHHHHHH
Q 017868          174 CR-RANIGPETNVLIMGA-GPIGLVTMLGAPRAFGAPRIVIVDVDDYRLSVAKEIGADNIVKVSTNLQDIAEEVEKIQKA  251 (365)
Q Consensus       174 ~~-~~~~~~g~~vlI~G~-g~~G~~ai~~l~~~~g~~~vi~v~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~i~~~~~~  251 (365)
                      +. ..++++|++|||+|+ |++|++++| +++.+|+ .++++.+++++.++++++|++++++|.+  +++.+.+++++. 
T Consensus       134 l~~~~~l~~g~~VLV~gaaGgVG~~aiQ-lAk~~G~-~~v~~~~s~~k~~~~~~lGAd~vi~y~~--~~~~~~v~~~t~-  208 (326)
T COG0604         134 LFDRAGLKPGETVLVHGAAGGVGSAAIQ-LAKALGA-TVVAVVSSSEKLELLKELGADHVINYRE--EDFVEQVRELTG-  208 (326)
T ss_pred             HHHhcCCCCCCEEEEecCCchHHHHHHH-HHHHcCC-cEEEEecCHHHHHHHHhcCCCEEEcCCc--ccHHHHHHHHcC-
Confidence            85 588999999999986 999999999 9999998 4555556777777999999999999755  569999988864 


Q ss_pred             hCCCceEEEeCCCCHHHHHHHHHhcccCCEEEEEccCC--CCccccchHhhhcCcEEEeeccc-------CCcHHHHHHH
Q 017868          252 MGTGIDVSFDCAGLNKTMSTALGATCAGGKVCLVGMGH--HEMTVPLTPAAVREVDVVGVFRY-------KNTWPLCLEL  322 (365)
Q Consensus       252 ~~~~~d~vid~~g~~~~~~~~~~~l~~~G~~~~~g~~~--~~~~~~~~~~~~~~~~i~~~~~~-------~~~~~~~~~~  322 (365)
                       +.++|+|+|++|.. .+..++.+|+++|+++.+|...  ....++...+..+.+...+....       .+.+.++.++
T Consensus       209 -g~gvDvv~D~vG~~-~~~~~l~~l~~~G~lv~ig~~~g~~~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~l~~~  286 (326)
T COG0604         209 -GKGVDVVLDTVGGD-TFAASLAALAPGGRLVSIGALSGGPPVPLNLLPLLGKRLTLRGVTLGSRDPEALAEALAELFDL  286 (326)
T ss_pred             -CCCceEEEECCCHH-HHHHHHHHhccCCEEEEEecCCCCCccccCHHHHhhccEEEEEecceecchHHHHHHHHHHHHH
Confidence             67899999999975 8888999999999999998755  23344455567778888887655       2467789999


Q ss_pred             HHcCCCCCCCceEEEecCChhhHHHHHHHHhc-CCCceEEEEeC
Q 017868          323 LRSGKIDVKPLVTHRFGFSQKEVEEAFETSAR-GGTAIKVMFNL  365 (365)
Q Consensus       323 l~~g~~~~~~~~~~~~~~~~~~~~~a~~~~~~-~~~~gk~vi~~  365 (365)
                      +++|.+  ++.++++|+|  ++...+..+... ++..||+|+++
T Consensus       287 ~~~g~l--~~~i~~~~~l--~e~~~a~a~~~~~~~~~GKvvl~~  326 (326)
T COG0604         287 LASGKL--KPVIDRVYPL--AEAPAAAAHLLLERRTTGKVVLKV  326 (326)
T ss_pred             HHcCCC--cceeccEech--hhhHHHHHHHHcccCCcceEEEeC
Confidence            999999  7888889999  885555444333 58999999974

>PLN02586 probable cinnamyl alcohol dehydrogenase

Probab=100.00  E-value=7.5e-48  Score=354.69  Aligned_cols=341  Identities=22%  Similarity=0.344  Sum_probs=275.2

Q ss_pred             CCccccccchhcceeEEEecC-CceEEEEecCCCCCCCcEEEEEeeeeeCcccHhhhhccccCCccCCCCcccCccceEE
Q 017868            6 MSQGEKEDGEEVNMAAWLLGV-NTLKIQPFELPSLGPYDVLVRMKAVGICGSDVHYLKTLRCADFVVKEPMVIGHECAGV   84 (365)
Q Consensus         6 ~~~~~~~~~~~~~~~~~~~~~-~~l~~~~~~~p~~~~~eVlI~v~~~~l~~~D~~~~~g~~~~~~~~~~p~~~G~e~~G~   84 (365)
                      |..+.+|.-++++++++..+. +.+++.+++.|.|+++||+|||.++++|++|++.+.|...   ...+|.++|||++|+
T Consensus         1 ~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~p~~~~~eVlV~v~~~gic~sD~~~~~g~~~---~~~~p~i~GhE~~G~   77 (360)
T PLN02586          1 MAKSPEEEHPQKAFGWAARDPSGVLSPFHFSRRENGDEDVTVKILYCGVCHSDLHTIKNEWG---FTRYPIVPGHEIVGI   77 (360)
T ss_pred             CCCChhhhchhheeEEEecCCCCCceEEeecCCCCCCCeEEEEEEEecCChhhHhhhcCCcC---CCCCCccCCcceeEE
Confidence            344455555666777777764 6799999999999999999999999999999998876432   135688999999999


Q ss_pred             EEEeCCCCCCCCCCCEEEEcC-CcCCCCCccccCCCCCCCCCccccc------cCCCCcceeeEEeecCCceEECCCCCC
Q 017868           85 IEKVGSEVKTLVPGDRVALEP-GISCWRCDHCKGGRYNLCPEMKFFA------TPPVHGSLANQVVHPADLCFKLPDNVS  157 (365)
Q Consensus        85 V~~vG~~v~~~~~Gd~V~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~------~~~~~g~~~~~~~v~~~~~~~iP~~~~  157 (365)
                      |+++|++|++|++||||++.+ ..+|++|++|+.+.+++|++..+..      ....+|+|+||+.+++++++++|++++
T Consensus        78 V~~vG~~v~~~~vGdrV~~~~~~~~Cg~C~~C~~g~~~~C~~~~~~~~~~~~~g~~~~G~~aey~~v~~~~~~~lP~~ls  157 (360)
T PLN02586         78 VTKLGKNVKKFKEGDRVGVGVIVGSCKSCESCDQDLENYCPKMIFTYNSIGHDGTKNYGGYSDMIVVDQHFVLRFPDNLP  157 (360)
T ss_pred             EEEECCCCCccCCCCEEEEccccCcCCCCccccCCCcccCCCccccccccccCCCcCCCccceEEEEchHHeeeCCCCCC
Confidence            999999999999999998644 3579999999999999999765431      112469999999999999999999999


Q ss_pred             cchhccch-hhHHHHHHHHh-cCCCCCCEEEEEcCCHHHHHHHHHHHHHCCCCeEEEEeCChh-HHHHHHHcCCCEEEeC
Q 017868          158 LEEGAMCE-PLSVGLHACRR-ANIGPETNVLIMGAGPIGLVTMLGAPRAFGAPRIVIVDVDDY-RLSVAKEIGADNIVKV  234 (365)
Q Consensus       158 ~~~a~~~~-~~~~a~~~~~~-~~~~~g~~vlI~G~g~~G~~ai~~l~~~~g~~~vi~v~~~~~-~~~~~~~~g~~~~~~~  234 (365)
                      +++|+.++ ...|||+++.. ..+++|++|||.|+|++|++++| +++.+|++ +++++.+++ +.+.++++|++.+++.
T Consensus       158 ~~~aa~l~~~~~ta~~al~~~~~~~~g~~VlV~G~G~vG~~avq-~Ak~~Ga~-vi~~~~~~~~~~~~~~~~Ga~~vi~~  235 (360)
T PLN02586        158 LDAGAPLLCAGITVYSPMKYYGMTEPGKHLGVAGLGGLGHVAVK-IGKAFGLK-VTVISSSSNKEDEAINRLGADSFLVS  235 (360)
T ss_pred             HHHhhhhhcchHHHHHHHHHhcccCCCCEEEEECCCHHHHHHHH-HHHHCCCE-EEEEeCCcchhhhHHHhCCCcEEEcC
Confidence            99998776 66788888854 55789999999999999999999 99999995 555555544 4567789999888764


Q ss_pred             CCCcccHHHHHHHHHHHhCCCceEEEeCCCCHHHHHHHHHhcccCCEEEEEccCCCCccccchHhhhcCcEEEeeccc-C
Q 017868          235 STNLQDIAEEVEKIQKAMGTGIDVSFDCAGLNKTMSTALGATCAGGKVCLVGMGHHEMTVPLTPAAVREVDVVGVFRY-K  313 (365)
Q Consensus       235 ~~~~~~~~~~i~~~~~~~~~~~d~vid~~g~~~~~~~~~~~l~~~G~~~~~g~~~~~~~~~~~~~~~~~~~i~~~~~~-~  313 (365)
                      ..  .   +.+++..    +++|++||++|....+..++++++++|+++.+|.......++...+..++..+.+++.. .
T Consensus       236 ~~--~---~~~~~~~----~~~D~vid~~g~~~~~~~~~~~l~~~G~iv~vG~~~~~~~~~~~~~~~~~~~i~g~~~~~~  306 (360)
T PLN02586        236 TD--P---EKMKAAI----GTMDYIIDTVSAVHALGPLLGLLKVNGKLITLGLPEKPLELPIFPLVLGRKLVGGSDIGGI  306 (360)
T ss_pred             CC--H---HHHHhhc----CCCCEEEECCCCHHHHHHHHHHhcCCcEEEEeCCCCCCCccCHHHHHhCCeEEEEcCcCCH
Confidence            32  1   2343331    36999999999877888999999999999999865444455556667788888887654 4


Q ss_pred             CcHHHHHHHHHcCCCCCCCceEEEecCChhhHHHHHHHHhcCCCceEEEEeC
Q 017868          314 NTWPLCLELLRSGKIDVKPLVTHRFGFSQKEVEEAFETSARGGTAIKVMFNL  365 (365)
Q Consensus       314 ~~~~~~~~~l~~g~~~~~~~~~~~~~~~~~~~~~a~~~~~~~~~~gk~vi~~  365 (365)
                      ..++++++++++|++.  +.+ ++|+|  +++.+|++.+.+++..||+|+++
T Consensus       307 ~~~~~~~~li~~g~i~--~~~-~~~~l--~~~~~A~~~~~~~~~~gkvvi~~  353 (360)
T PLN02586        307 KETQEMLDFCAKHNIT--ADI-ELIRM--DEINTAMERLAKSDVRYRFVIDV  353 (360)
T ss_pred             HHHHHHHHHHHhCCCC--CcE-EEEeH--HHHHHHHHHHHcCCCcEEEEEEc
Confidence            5789999999999994  444 57888  99999999999998889999874

>cd08300 alcohol_DH_class_III class III alcohol dehydrogenases

Probab=100.00  E-value=3e-47  Score=352.42  Aligned_cols=337  Identities=26%  Similarity=0.419  Sum_probs=276.9

Q ss_pred             cceeEEEecC-CceEEEEecCCCCCCCcEEEEEeeeeeCcccHhhhhccccCCccCCCCcccCccceEEEEEeCCCCCCC
Q 017868           17 VNMAAWLLGV-NTLKIQPFELPSLGPYDVLVRMKAVGICGSDVHYLKTLRCADFVVKEPMVIGHECAGVIEKVGSEVKTL   95 (365)
Q Consensus        17 ~~~~~~~~~~-~~l~~~~~~~p~~~~~eVlI~v~~~~l~~~D~~~~~g~~~~~~~~~~p~~~G~e~~G~V~~vG~~v~~~   95 (365)
                      +|+++++... ++++++++|.|.|.++||+|||.++++|++|+..+.|....   ..+|.++|||++|+|+++|+++++|
T Consensus         2 ~~~a~~~~~~~~~~~~~~~~~P~~~~~eVlIrv~a~gi~~~D~~~~~g~~~~---~~~p~v~G~E~~G~V~~vG~~v~~~   78 (368)
T cd08300           2 TCKAAVAWEAGKPLSIEEVEVAPPKAGEVRIKILATGVCHTDAYTLSGADPE---GLFPVILGHEGAGIVESVGEGVTSV   78 (368)
T ss_pred             cceEEEEecCCCCcEEEEeecCCCCCCEEEEEEEEEEechhhHHHhcCCCcc---CCCCceeccceeEEEEEeCCCCccC
Confidence            5788887754 68999999999999999999999999999999988775321   3568999999999999999999999


Q ss_pred             CCCCEEEEcCCcCCCCCccccCCCCCCCCCcccc---cc-----------------CCCCcceeeEEeecCCceEECCCC
Q 017868           96 VPGDRVALEPGISCWRCDHCKGGRYNLCPEMKFF---AT-----------------PPVHGSLANQVVHPADLCFKLPDN  155 (365)
Q Consensus        96 ~~Gd~V~~~~~~~~~~~~~~~~~~~~~~~~~~~~---~~-----------------~~~~g~~~~~~~v~~~~~~~iP~~  155 (365)
                      ++||||++.+..+|++|++|+.++++.|.+....   +.                 ....|+|+||+.++++.++++|++
T Consensus        79 ~vGdrV~~~~~~~cg~C~~c~~g~~~~c~~~~~~~~~g~~~~g~~~~~~~g~~~~~~~~~G~~aey~~v~~~~~~~iP~~  158 (368)
T cd08300          79 KPGDHVIPLYTPECGECKFCKSGKTNLCQKIRATQGKGLMPDGTSRFSCKGKPIYHFMGTSTFSEYTVVAEISVAKINPE  158 (368)
T ss_pred             CCCCEEEEcCCCCCCCChhhcCCCcCcCCCccccccccccCCCccccccCCcccccccccccceeEEEEchhceEeCCCC
Confidence            9999999999999999999999999999865321   00                 002479999999999999999999


Q ss_pred             CCcchhccch-hhHHHHHHH-HhcCCCCCCEEEEEcCCHHHHHHHHHHHHHCCCCeEEEEeCChhHHHHHHHcCCCEEEe
Q 017868          156 VSLEEGAMCE-PLSVGLHAC-RRANIGPETNVLIMGAGPIGLVTMLGAPRAFGAPRIVIVDVDDYRLSVAKEIGADNIVK  233 (365)
Q Consensus       156 ~~~~~a~~~~-~~~~a~~~~-~~~~~~~g~~vlI~G~g~~G~~ai~~l~~~~g~~~vi~v~~~~~~~~~~~~~g~~~~~~  233 (365)
                      +++++++.++ ++.+||+++ +.+++++|++|||+|+|++|++++| +++.+|+++|++++++++|.++++++|++.+++
T Consensus       159 l~~~~aa~l~~~~~ta~~a~~~~~~~~~g~~VlV~G~G~vG~~a~~-~ak~~G~~~vi~~~~~~~~~~~~~~lGa~~~i~  237 (368)
T cd08300         159 APLDKVCLLGCGVTTGYGAVLNTAKVEPGSTVAVFGLGAVGLAVIQ-GAKAAGASRIIGIDINPDKFELAKKFGATDCVN  237 (368)
T ss_pred             CChhhhhhhccchhhhHHHHHHhcCCCCCCEEEEECCCHHHHHHHH-HHHHcCCCeEEEEeCCHHHHHHHHHcCCCEEEc
Confidence            9999988886 778999987 5688999999999999999999999 999999977899999999999999999999887


Q ss_pred             CCCCcccHHHHHHHHHHHhCCCceEEEeCCCCHHHHHHHHHhcccC-CEEEEEccCCC--CccccchHhhhcCcEEEeec
Q 017868          234 VSTNLQDIAEEVEKIQKAMGTGIDVSFDCAGLNKTMSTALGATCAG-GKVCLVGMGHH--EMTVPLTPAAVREVDVVGVF  310 (365)
Q Consensus       234 ~~~~~~~~~~~i~~~~~~~~~~~d~vid~~g~~~~~~~~~~~l~~~-G~~~~~g~~~~--~~~~~~~~~~~~~~~i~~~~  310 (365)
                      +.+.++++.+.+++++   ++++|+|||++|....+..++++++++ |+++.+|....  ........+. +...+.+..
T Consensus       238 ~~~~~~~~~~~v~~~~---~~g~d~vid~~g~~~~~~~a~~~l~~~~G~~v~~g~~~~~~~~~~~~~~~~-~~~~~~g~~  313 (368)
T cd08300         238 PKDHDKPIQQVLVEMT---DGGVDYTFECIGNVKVMRAALEACHKGWGTSVIIGVAAAGQEISTRPFQLV-TGRVWKGTA  313 (368)
T ss_pred             ccccchHHHHHHHHHh---CCCCcEEEECCCChHHHHHHHHhhccCCCeEEEEccCCCCCccccCHHHHh-hcCeEEEEE
Confidence            6543335666666654   348999999999877889999999886 99999986532  1122222222 334555543


Q ss_pred             c----cCCcHHHHHHHHHcCCCCCCCceEEEecCChhhHHHHHHHHhcCCCceEEEEe
Q 017868          311 R----YKNTWPLCLELLRSGKIDVKPLVTHRFGFSQKEVEEAFETSARGGTAIKVMFN  364 (365)
Q Consensus       311 ~----~~~~~~~~~~~l~~g~~~~~~~~~~~~~~~~~~~~~a~~~~~~~~~~gk~vi~  364 (365)
                      .    ....+.+++++++++.+.+.+.++++|+|  +++.+|++.+.++.. .|+++.
T Consensus       314 ~~~~~~~~~~~~~~~~~~~g~l~~~~~i~~~~~l--e~~~~A~~~~~~~~~-~k~~~~  368 (368)
T cd08300         314 FGGWKSRSQVPKLVEDYMKGKIKVDEFITHTMPL--DEINEAFDLMHAGKS-IRTVVK  368 (368)
T ss_pred             ecccCcHHHHHHHHHHHHcCCCChhhceeeeEcH--HHHHHHHHHHhCCCC-ceeeeC
Confidence            2    24578899999999999777788999999  999999999988754 688874

Members identified as glutathione-dependent formaldehyde dehydrogenase(FDH), a member of the zinc dependent/medium chain alcohol dehydrogenase family. FDH converts formaldehyde and NAD(P) to formate and NAD(P)H. The initial step in this process the spontaneous formation of a S-(hydroxymethyl)glutathione adduct from formaldehyde and glutathione, followed by FDH-mediated oxidation (and detoxification) of the adduct to S-formylglutathione. MDH family uses NAD(H) as a cofactor in the interconversion of alcohols and aldehydes or ketones. Like many zinc-dependent alcohol dehydrogenases (ADH) of the medium chain alcohol dehydrogenase/reductase family (MDR), these FDHs form dimers, with 4 zinc ions per dimer. The medium chain alcohol dehydrogenase family (MDR) have a NAD(P)(H)-binding domain in a Rossmann fold of a beta-alpha form. The N-terminal region typically has an all-beta catalytic domain. These proteins typically form dim

>cd08233 butanediol_DH_like (2R,3R)-2,3-butanediol dehydrogenase

Probab=100.00  E-value=5.3e-47  Score=349.16  Aligned_cols=340  Identities=36%  Similarity=0.621  Sum_probs=290.8

Q ss_pred             ceeEEEecCCceEEEEecCCCCCCCcEEEEEeeeeeCcccHhhhhccccC-C-------ccCCCCcccCccceEEEEEeC
Q 017868           18 NMAAWLLGVNTLKIQPFELPSLGPYDVLVRMKAVGICGSDVHYLKTLRCA-D-------FVVKEPMVIGHECAGVIEKVG   89 (365)
Q Consensus        18 ~~~~~~~~~~~l~~~~~~~p~~~~~eVlI~v~~~~l~~~D~~~~~g~~~~-~-------~~~~~p~~~G~e~~G~V~~vG   89 (365)
                      |+++++.+++.++++++|.|+|.++||+||+.++++|+.|+..+.+.... .       ....+|.++|||++|+|+++|
T Consensus         1 mka~~~~~~~~l~~~~~~~p~~~~~evlV~v~a~~~~~~d~~~~~~~~~~~~~~~~~~~~~~~~p~i~G~e~~G~V~~vG   80 (351)
T cd08233           1 MKAARYHGRKDIRVEEVPEPPVKPGEVKIKVAWCGICGSDLHEYLDGPIFIPTEGHPHLTGETAPVTLGHEFSGVVVEVG   80 (351)
T ss_pred             CceEEEecCCceEEEeccCCCCCCCeEEEEEEEEEECccchHhhcCCCccccccccccccccCCCceecccceEEEEEeC
Confidence            57888888889999999999999999999999999999998876542110 0       012368899999999999999


Q ss_pred             CCCCCCCCCCEEEEcCCcCCCCCccccCCCCCCCCCccccccCCCCcceeeEEeecCCceEECCCCCCcchhccchhhHH
Q 017868           90 SEVKTLVPGDRVALEPGISCWRCDHCKGGRYNLCPEMKFFATPPVHGSLANQVVHPADLCFKLPDNVSLEEGAMCEPLSV  169 (365)
Q Consensus        90 ~~v~~~~~Gd~V~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~v~~~~~~~iP~~~~~~~a~~~~~~~~  169 (365)
                      +++++|++||+|++.+..+|++|.+|+.+.+++|.+..+.+....+|+|+||+.++...++++|+++++++++.+.++.+
T Consensus        81 ~~v~~~~~Gd~V~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~a~~~~~~~~~~~~lP~~~~~~~aa~~~~~~t  160 (351)
T cd08233          81 SGVTGFKVGDRVVVEPTIKCGTCGACKRGLYNLCDSLGFIGLGGGGGGFAEYVVVPAYHVHKLPDNVPLEEAALVEPLAV  160 (351)
T ss_pred             CCCCCCCCCCEEEECCCCCCCCChHHhCcCcccCCCCceeccCCCCCceeeEEEechHHeEECcCCCCHHHhhhccHHHH
Confidence            99999999999999999999999999999999998776544333369999999999999999999999999887777889


Q ss_pred             HHHHHHhcCCCCCCEEEEEcCCHHHHHHHHHHHHHCCCCeEEEEeCChhHHHHHHHcCCCEEEeCCCCcccHHHHHHHHH
Q 017868          170 GLHACRRANIGPETNVLIMGAGPIGLVTMLGAPRAFGAPRIVIVDVDDYRLSVAKEIGADNIVKVSTNLQDIAEEVEKIQ  249 (365)
Q Consensus       170 a~~~~~~~~~~~g~~vlI~G~g~~G~~ai~~l~~~~g~~~vi~v~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~i~~~~  249 (365)
                      ||++++..++++|++|||+|+|.+|++++| +++..|++.++++++++++.++++++|++.++++.  ..++.+.+++..
T Consensus       161 a~~~l~~~~~~~g~~vlI~g~g~vG~~a~q-~a~~~G~~~v~~~~~~~~~~~~~~~~ga~~~i~~~--~~~~~~~l~~~~  237 (351)
T cd08233         161 AWHAVRRSGFKPGDTALVLGAGPIGLLTIL-ALKAAGASKIIVSEPSEARRELAEELGATIVLDPT--EVDVVAEVRKLT  237 (351)
T ss_pred             HHHHHHhcCCCCCCEEEEECCCHHHHHHHH-HHHHcCCCEEEEECCCHHHHHHHHHhCCCEEECCC--ccCHHHHHHHHh
Confidence            999998788999999999998999999999 99999997788888899999999999999887754  356777776653


Q ss_pred             HHhCCCceEEEeCCCCHHHHHHHHHhcccCCEEEEEccCCCCccccchHhhhcCcEEEeeccc-CCcHHHHHHHHHcCCC
Q 017868          250 KAMGTGIDVSFDCAGLNKTMSTALGATCAGGKVCLVGMGHHEMTVPLTPAAVREVDVVGVFRY-KNTWPLCLELLRSGKI  328 (365)
Q Consensus       250 ~~~~~~~d~vid~~g~~~~~~~~~~~l~~~G~~~~~g~~~~~~~~~~~~~~~~~~~i~~~~~~-~~~~~~~~~~l~~g~~  328 (365)
                      .  +.++|++||++|....+..++++++++|+++.+|.......++...+..+++++.+.+.+ .+++++++++++++.+
T Consensus       238 ~--~~~~d~vid~~g~~~~~~~~~~~l~~~G~~v~~g~~~~~~~~~~~~~~~~~~~i~g~~~~~~~~~~~~~~~~~~g~l  315 (351)
T cd08233         238 G--GGGVDVSFDCAGVQATLDTAIDALRPRGTAVNVAIWEKPISFNPNDLVLKEKTLTGSICYTREDFEEVIDLLASGKI  315 (351)
T ss_pred             C--CCCCCEEEECCCCHHHHHHHHHhccCCCEEEEEccCCCCCccCHHHHHhhCcEEEEEeccCcchHHHHHHHHHcCCC
Confidence            2  567999999999777889999999999999999875544455666678899999998766 6789999999999999


Q ss_pred             CCCCceEEEecCChhhH-HHHHHHHhcCCCc-eEEEEe
Q 017868          329 DVKPLVTHRFGFSQKEV-EEAFETSARGGTA-IKVMFN  364 (365)
Q Consensus       329 ~~~~~~~~~~~~~~~~~-~~a~~~~~~~~~~-gk~vi~  364 (365)
                      .+.+.++++|++  +++ ++|++.+.+++.. +|+||.
T Consensus       316 ~~~~~i~~~~~l--~e~~~~a~~~~~~~~~~~~k~v~~  351 (351)
T cd08233         316 DAEPLITSRIPL--EDIVEKGFEELINDKEQHVKILVS  351 (351)
T ss_pred             ChHHheEEEecH--HHHHHHHHHHHHhCCCCceEEEeC
Confidence            766778889988  996 7999999888764 999974

(2R,3R)-2,3-butanediol dehydrogenase, a zinc-dependent medium chain alcohol dehydrogenase, catalyzes the NAD(+)-dependent oxidation of (2R,3R)-2,3-butanediol and meso-butanediol to acetoin. BDH functions as a homodimer. NAD(P)(H)-dependent oxidoreductases are the major enzymes in the interconversion of alcohols and aldehydes, or ketones. The medium chain alcohol dehydrogenase family (MDR) have a NAD(P)(H)-binding domain in a Rossmann fold of a beta-alpha form. The N-terminal region typically has an all-beta catalytic domain. These proteins typically form dimers (typically higher plants, mammals) or tetramers (yeast, bacteria), and have 2 tightly bound zinc atoms per subunit. Sorbitol and aldose reductase are NAD(+) binding proteins of the polyol pathway, which interconverts glucose and fructose. Sorbitol dehydrogenase is tetrameric and has a single catalytic zinc per subunit.

>TIGR03201 dearomat_had 6-hydroxycyclohex-1-ene-1-carbonyl-CoA dehydrogenase

Probab=100.00  E-value=3.8e-47  Score=349.43  Aligned_cols=334  Identities=23%  Similarity=0.434  Sum_probs=279.0

Q ss_pred             EEEecCCc-eEEEEecCCCCCCCcEEEEEeeeeeCcccHhhhhccccCCccCCCCcccCccceEEEEEeCCCCCCCCCCC
Q 017868           21 AWLLGVNT-LKIQPFELPSLGPYDVLVRMKAVGICGSDVHYLKTLRCADFVVKEPMVIGHECAGVIEKVGSEVKTLVPGD   99 (365)
Q Consensus        21 ~~~~~~~~-l~~~~~~~p~~~~~eVlI~v~~~~l~~~D~~~~~g~~~~~~~~~~p~~~G~e~~G~V~~vG~~v~~~~~Gd   99 (365)
                      .++.++++ ++++++|.|.++++||+|||.++++|++|++...+....  ...+|.++|||++|+|+++|++++.+ +||
T Consensus         2 ~~~~~~g~~~~~~~~p~P~~~~~evlVrv~~~gic~sD~~~~~~~~~~--~~~~p~i~GhE~~G~V~~vG~~v~~~-~Gd   78 (349)
T TIGR03201         2 WMMTEPGKPMVKTRVEIPELGAGDVVVKVAGCGVCHTDLSYYYMGVRT--NHALPLALGHEISGRVIQAGAGAASW-IGK   78 (349)
T ss_pred             ceEecCCCCceEEeccCCCCCCCeEEEEEEEEeecccchHHHcCCCCc--cCCCCeeccccceEEEEEeCCCcCCC-CCC
Confidence            34555554 899999999999999999999999999999877443211  13568899999999999999999887 999


Q ss_pred             EEEEcCCcCCCCCccccCCCCCCCCCccccccCCCCcceeeEEeecCCceEECCC------CCCcchhccch-hhHHHHH
Q 017868          100 RVALEPGISCWRCDHCKGGRYNLCPEMKFFATPPVHGSLANQVVHPADLCFKLPD------NVSLEEGAMCE-PLSVGLH  172 (365)
Q Consensus       100 ~V~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~v~~~~~~~iP~------~~~~~~a~~~~-~~~~a~~  172 (365)
                      ||++.+..+|++|.+|+.+++++|......+. ...|+|+||+.+++++++++|+      +++++.++.+. ++.++++
T Consensus        79 rV~~~~~~~cg~c~~c~~g~~~~c~~~~~~g~-~~~G~~ae~~~v~~~~~~~ip~~~~~~~~~~~~~~a~~~~~~~ta~~  157 (349)
T TIGR03201        79 AVIVPAVIPCGECELCKTGRGTICRAQKMPGN-DMQGGFASHIVVPAKGLCVVDEARLAAAGLPLEHVSVVADAVTTPYQ  157 (349)
T ss_pred             EEEECCCCCCCCChhhhCcCcccCCCCCccCc-CCCCcccceEEechHHeEECCcccccccCCCHHHhhhhcchHHHHHH
Confidence            99999999999999999999999987665543 3469999999999999999999      88888877764 7889999


Q ss_pred             HHHhcCCCCCCEEEEEcCCHHHHHHHHHHHHHCCCCeEEEEeCChhHHHHHHHcCCCEEEeCCCCc-ccHHHHHHHHHHH
Q 017868          173 ACRRANIGPETNVLIMGAGPIGLVTMLGAPRAFGAPRIVIVDVDDYRLSVAKEIGADNIVKVSTNL-QDIAEEVEKIQKA  251 (365)
Q Consensus       173 ~~~~~~~~~g~~vlI~G~g~~G~~ai~~l~~~~g~~~vi~v~~~~~~~~~~~~~g~~~~~~~~~~~-~~~~~~i~~~~~~  251 (365)
                      +++...+++|++|||+|+|++|++++| +++..|+ .+++++++++|.++++++|++.++++.+.+ +++.+.+++++. 
T Consensus       158 a~~~~~~~~g~~VlV~G~G~vG~~a~~-~a~~~G~-~vi~~~~~~~~~~~~~~~Ga~~~i~~~~~~~~~~~~~~~~~t~-  234 (349)
T TIGR03201       158 AAVQAGLKKGDLVIVIGAGGVGGYMVQ-TAKAMGA-AVVAIDIDPEKLEMMKGFGADLTLNPKDKSAREVKKLIKAFAK-  234 (349)
T ss_pred             HHHhcCCCCCCEEEEECCCHHHHHHHH-HHHHcCC-eEEEEcCCHHHHHHHHHhCCceEecCccccHHHHHHHHHhhcc-
Confidence            988788999999999999999999999 9999999 588888999999999999998887754321 245555655543 


Q ss_pred             hCCCce----EEEeCCCCHHHHHHHHHhcccCCEEEEEccCCCCccccchHhhhcCcEEEeeccc-CCcHHHHHHHHHcC
Q 017868          252 MGTGID----VSFDCAGLNKTMSTALGATCAGGKVCLVGMGHHEMTVPLTPAAVREVDVVGVFRY-KNTWPLCLELLRSG  326 (365)
Q Consensus       252 ~~~~~d----~vid~~g~~~~~~~~~~~l~~~G~~~~~g~~~~~~~~~~~~~~~~~~~i~~~~~~-~~~~~~~~~~l~~g  326 (365)
                       +.++|    ++|||+|....+..++++++++|+++.+|.......++...++.+..++.+.+.. ..+++++++++++|
T Consensus       235 -~~g~d~~~d~v~d~~g~~~~~~~~~~~l~~~G~iv~~G~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~i~~g  313 (349)
T TIGR03201       235 -ARGLRSTGWKIFECSGSKPGQESALSLLSHGGTLVVVGYTMAKTEYRLSNLMAFHARALGNWGCPPDRYPAALDLVLDG  313 (349)
T ss_pred             -cCCCCCCcCEEEECCCChHHHHHHHHHHhcCCeEEEECcCCCCcccCHHHHhhcccEEEEEecCCHHHHHHHHHHHHcC
Confidence             56776    8999999887888899999999999999875444445555666778888888754 56799999999999


Q ss_pred             CCCCCCceEEEecCChhhHHHHHHHHhcCCCceEEEEeC
Q 017868          327 KIDVKPLVTHRFGFSQKEVEEAFETSARGGTAIKVMFNL  365 (365)
Q Consensus       327 ~~~~~~~~~~~~~~~~~~~~~a~~~~~~~~~~gk~vi~~  365 (365)
                      .+.+.+.+ +.|+|  +++++|++.++++...+|+++++
T Consensus       314 ~i~~~~~i-~~~~l--~~~~~A~~~~~~~~~~~k~~~~~  349 (349)
T TIGR03201       314 KIQLGPFV-ERRPL--DQIEHVFAAAHHHKLKRRAILTP  349 (349)
T ss_pred             CCCcccce-EEecH--HHHHHHHHHHHcCCccceEEecC
Confidence            99766666 46888  99999999999998899999864

Members of this protein family are 6-hydroxycyclohex-1-ene-1-carbonyl-CoA dehydrogenase, an enzyme in the anaerobic metabolism of aromatic enzymes by way of benzoyl-CoA, as seen in Thauera aromatica, Geobacter metallireducens, and Azoarcus sp. The experimentally characterized form from T. aromatica uses only NAD+, not NADP+. Note that Rhodopseudomonas palustris uses a different pathway to perform a similar degradation of benzoyl-CoA to 3-hydroxpimelyl-CoA.

>cd08230 glucose_DH Glucose dehydrogenase

Probab=100.00  E-value=5.2e-47  Score=349.40  Aligned_cols=331  Identities=27%  Similarity=0.398  Sum_probs=265.0

Q ss_pred             ceeEEEecC-CceEEEEecCCCCCCCcEEEEEeeeeeCcccHhhhhccccCCccCCCCcccCccceEEEEEeCCCCCCCC
Q 017868           18 NMAAWLLGV-NTLKIQPFELPSLGPYDVLVRMKAVGICGSDVHYLKTLRCADFVVKEPMVIGHECAGVIEKVGSEVKTLV   96 (365)
Q Consensus        18 ~~~~~~~~~-~~l~~~~~~~p~~~~~eVlI~v~~~~l~~~D~~~~~g~~~~~~~~~~p~~~G~e~~G~V~~vG~~v~~~~   96 (365)
                      |+++++..+ ..+++.++|.|+|+++||+|||.++++|++|++.+.|.+.......+|.++|||++|+|+++|++ ++|+
T Consensus         1 mka~~~~~~~~~l~~~~~p~p~~~~~evlVkv~a~gi~~~D~~~~~g~~~~~~~~~~p~i~G~e~~G~V~~vG~~-~~~~   79 (355)
T cd08230           1 MKAIAVKPGKPGVRVVDIPEPEPTPGEVLVRTLEVGVCGTDREIVAGEYGTAPPGEDFLVLGHEALGVVEEVGDG-SGLS   79 (355)
T ss_pred             CceeEecCCCCCCeEEeCCCCCCCCCeEEEEEEEEEeccccHHHHcCCCCCCCCCCCCeeeccccceEEEEecCC-CCCC
Confidence            467777643 34999999999999999999999999999999999875422111245789999999999999999 9999


Q ss_pred             CCCEEEEcCCcCCCCCccccCCCCCCCCCcccc--ccCCCCcceeeEEeecCCceEECCCCCCcchhccchhhHHHHHHH
Q 017868           97 PGDRVALEPGISCWRCDHCKGGRYNLCPEMKFF--ATPPVHGSLANQVVHPADLCFKLPDNVSLEEGAMCEPLSVGLHAC  174 (365)
Q Consensus        97 ~Gd~V~~~~~~~~~~~~~~~~~~~~~~~~~~~~--~~~~~~g~~~~~~~v~~~~~~~iP~~~~~~~a~~~~~~~~a~~~~  174 (365)
                      +||||++.+..+|++|.+|..+++++|+.....  +....+|+|+||+.++++.++++|++++ +.++...+++++++++
T Consensus        80 vGdrV~~~~~~~cg~C~~c~~g~~~~c~~~~~~~~g~~~~~G~~aey~~~~~~~~~~~P~~~~-~~a~~~~p~~~~~~a~  158 (355)
T cd08230          80 PGDLVVPTVRRPPGKCLNCRIGRPDFCETGEYTERGIKGLHGFMREYFVDDPEYLVKVPPSLA-DVGVLLEPLSVVEKAI  158 (355)
T ss_pred             CCCEEEeccccCCCcChhhhCcCcccCCCcceeccCcCCCCccceeEEEeccccEEECCCCCC-cceeecchHHHHHHHH
Confidence            999999998889999999999999999875443  2223569999999999999999999999 5555555666655544


Q ss_pred             H-------hcCCCCCCEEEEEcCCHHHHHHHHHHHHHCCCCeEEEEeC---ChhHHHHHHHcCCCEEEeCCCCcccHHHH
Q 017868          175 R-------RANIGPETNVLIMGAGPIGLVTMLGAPRAFGAPRIVIVDV---DDYRLSVAKEIGADNIVKVSTNLQDIAEE  244 (365)
Q Consensus       175 ~-------~~~~~~g~~vlI~G~g~~G~~ai~~l~~~~g~~~vi~v~~---~~~~~~~~~~~g~~~~~~~~~~~~~~~~~  244 (365)
                      .       ..++++|++|||+|+|++|++++| +++..|+ .++++++   +++|.++++++|++. +++..  +++.+ 
T Consensus       159 ~~~~~~~~~~~~~~g~~vlI~G~G~vG~~a~q-~ak~~G~-~vi~~~~~~~~~~~~~~~~~~Ga~~-v~~~~--~~~~~-  232 (355)
T cd08230         159 EQAEAVQKRLPTWNPRRALVLGAGPIGLLAAL-LLRLRGF-EVYVLNRRDPPDPKADIVEELGATY-VNSSK--TPVAE-  232 (355)
T ss_pred             HHHhhhhhhcccCCCCEEEEECCCHHHHHHHH-HHHHcCC-eEEEEecCCCCHHHHHHHHHcCCEE-ecCCc--cchhh-
Confidence            2       123678999999999999999999 9999999 5777776   688999999999986 44322  33332 


Q ss_pred             HHHHHHHhCCCceEEEeCCCCHHHHHHHHHhcccCCEEEEEccCCC--Ccccc----chHhhhcCcEEEeeccc-CCcHH
Q 017868          245 VEKIQKAMGTGIDVSFDCAGLNKTMSTALGATCAGGKVCLVGMGHH--EMTVP----LTPAAVREVDVVGVFRY-KNTWP  317 (365)
Q Consensus       245 i~~~~~~~~~~~d~vid~~g~~~~~~~~~~~l~~~G~~~~~g~~~~--~~~~~----~~~~~~~~~~i~~~~~~-~~~~~  317 (365)
                      .+     ...++|+|||++|....+..++++++++|+++.+|....  ...++    ...+..+++++.|++.. .++++
T Consensus       233 ~~-----~~~~~d~vid~~g~~~~~~~~~~~l~~~G~~v~~G~~~~~~~~~~~~~~~~~~~~~k~~~i~g~~~~~~~~~~  307 (355)
T cd08230         233 VK-----LVGEFDLIIEATGVPPLAFEALPALAPNGVVILFGVPGGGREFEVDGGELNRDLVLGNKALVGSVNANKRHFE  307 (355)
T ss_pred             hh-----hcCCCCEEEECcCCHHHHHHHHHHccCCcEEEEEecCCCCCccccChhhhhhhHhhcCcEEEEecCCchhhHH
Confidence            11     146899999999987788999999999999999986544  22333    34567899999998765 56789


Q ss_pred             HHHHHHHcCCC----CCCCceEEEecCChhhHHHHHHHHhcCCCceEEEEeC
Q 017868          318 LCLELLRSGKI----DVKPLVTHRFGFSQKEVEEAFETSARGGTAIKVMFNL  365 (365)
Q Consensus       318 ~~~~~l~~g~~----~~~~~~~~~~~~~~~~~~~a~~~~~~~~~~gk~vi~~  365 (365)
                      ++++++.++.+    .+.+.++++|++  +++.+|++.++++.  +|+||++
T Consensus       308 ~~~~~l~~~~~~~~~~~~~~i~~~~~l--~~~~~a~~~~~~~~--~K~v~~~  355 (355)
T cd08230         308 QAVEDLAQWKYRWPGVLERLITRRVPL--EEFAEALTEKPDGE--IKVVIEW  355 (355)
T ss_pred             HHHHHHHhcccccccchHHheeeeecH--HHHHHHHHhcccCC--eEEEeeC
Confidence            99999998872    246778899999  99999999887653  6999975

Glucose dehydrogenase (GlcDH), a member of the medium chain dehydrogenase/zinc-dependent alcohol dehydrogenase-like family, catalyzes the NADP(+)-dependent oxidation of glucose to gluconate, the first step in the Entner-Doudoroff pathway, an alternative to or substitute for glycolysis or the pentose phosphate pathway. The medium chain dehydrogenases/reductase (MDR)/zinc-dependent alcohol dehydrogenase-like family, which contains the zinc-dependent alcohol dehydrogenase (ADH-Zn) and related proteins, is a diverse group of proteins related to the first identified member, class I mammalian ADH. MDRs display a broad range of activities and are distinguished from the smaller short chain dehydrogenases (~ 250 amino acids vs. the ~ 350 amino acids of the MDR). The MDR proteins have 2 domains: a C-terminal NAD(P) binding-Rossman fold domain of a beta-alpha form and an N-terminal catalytic domain with distant homology to GroES. The MDR group contai

>cd08277 liver_alcohol_DH_like Liver alcohol dehydrogenase

Probab=100.00  E-value=1e-46  Score=348.49  Aligned_cols=336  Identities=26%  Similarity=0.455  Sum_probs=281.0

Q ss_pred             cceeEEEecC-CceEEEEecCCCCCCCcEEEEEeeeeeCcccHhhhhccccCCccCCCCcccCccceEEEEEeCCCCCCC
Q 017868           17 VNMAAWLLGV-NTLKIQPFELPSLGPYDVLVRMKAVGICGSDVHYLKTLRCADFVVKEPMVIGHECAGVIEKVGSEVKTL   95 (365)
Q Consensus        17 ~~~~~~~~~~-~~l~~~~~~~p~~~~~eVlI~v~~~~l~~~D~~~~~g~~~~~~~~~~p~~~G~e~~G~V~~vG~~v~~~   95 (365)
                      +++++++.+. ++++++++|.|.+.++||+|||.++++|++|++...|...    ..+|.++|||++|+|+++|++++++
T Consensus         2 ~~ka~~~~~~~~~~~~~~~~~p~~~~~evlVkv~~~gi~~sD~~~~~g~~~----~~~p~i~G~e~~G~V~~vG~~v~~~   77 (365)
T cd08277           2 KCKAAVAWEAGKPLVIEEIEVAPPKANEVRIKMLATSVCHTDILAIEGFKA----TLFPVILGHEGAGIVESVGEGVTNL   77 (365)
T ss_pred             ccEEEEEccCCCCcEEEEEECCCCCCCEEEEEEEEEeechhhHHHhcCCCC----CCCCeecccceeEEEEeeCCCCccC
Confidence            5788888864 5699999999999999999999999999999998876432    3568899999999999999999999


Q ss_pred             CCCCEEEEcCCcCCCCCccccCCCCCCCCCcccccc-------------------CCCCcceeeEEeecCCceEECCCCC
Q 017868           96 VPGDRVALEPGISCWRCDHCKGGRYNLCPEMKFFAT-------------------PPVHGSLANQVVHPADLCFKLPDNV  156 (365)
Q Consensus        96 ~~Gd~V~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-------------------~~~~g~~~~~~~v~~~~~~~iP~~~  156 (365)
                      ++||||++.+..+|++|.+|..+.+++|++......                   ....|+|+||+.+++++++++|+++
T Consensus        78 ~~GdrV~~~~~~~c~~c~~c~~g~~~~c~~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~g~~ae~~~v~~~~~~~lP~~l  157 (365)
T cd08277          78 KPGDKVIPLFIGQCGECSNCRSGKTNLCQKYRANESGLMPDGTSRFTCKGKKIYHFLGTSTFSQYTVVDENYVAKIDPAA  157 (365)
T ss_pred             CCCCEEEECCCCCCCCCchhcCcCcccCcCccccccccccCCccccccCCcccccccccccceeeEEEchhheEECCCCC
Confidence            999999999999999999999999999987543211                   0124899999999999999999999


Q ss_pred             Ccchhccch-hhHHHHHHH-HhcCCCCCCEEEEEcCCHHHHHHHHHHHHHCCCCeEEEEeCChhHHHHHHHcCCCEEEeC
Q 017868          157 SLEEGAMCE-PLSVGLHAC-RRANIGPETNVLIMGAGPIGLVTMLGAPRAFGAPRIVIVDVDDYRLSVAKEIGADNIVKV  234 (365)
Q Consensus       157 ~~~~a~~~~-~~~~a~~~~-~~~~~~~g~~vlI~G~g~~G~~ai~~l~~~~g~~~vi~v~~~~~~~~~~~~~g~~~~~~~  234 (365)
                      ++++++.++ ++.+||+++ +.+++++|++|||+|+|++|+++++ +++.+|+.+|++++++++|.++++++|++.+++.
T Consensus       158 ~~~~aa~l~~~~~ta~~~~~~~~~~~~g~~vlV~G~g~vG~~~~~-~a~~~G~~~Vi~~~~~~~~~~~~~~~ga~~~i~~  236 (365)
T cd08277         158 PLEHVCLLGCGFSTGYGAAWNTAKVEPGSTVAVFGLGAVGLSAIM-GAKIAGASRIIGVDINEDKFEKAKEFGATDFINP  236 (365)
T ss_pred             CHHHhhHhcchhHHHHHHHHhhcCCCCCCEEEEECCCHHHHHHHH-HHHHcCCCeEEEEeCCHHHHHHHHHcCCCcEecc
Confidence            999999886 788999886 5688999999999999999999999 9999999778999999999999999999888775


Q ss_pred             CCCcccHHHHHHHHHHHhCCCceEEEeCCCCHHHHHHHHHhcccC-CEEEEEccCCC-CccccchHhhhcCcEEEeeccc
Q 017868          235 STNLQDIAEEVEKIQKAMGTGIDVSFDCAGLNKTMSTALGATCAG-GKVCLVGMGHH-EMTVPLTPAAVREVDVVGVFRY  312 (365)
Q Consensus       235 ~~~~~~~~~~i~~~~~~~~~~~d~vid~~g~~~~~~~~~~~l~~~-G~~~~~g~~~~-~~~~~~~~~~~~~~~i~~~~~~  312 (365)
                      .+.+.++.+.+++.+   ++++|++||++|....+..++++++++ |+++.+|.... ...++...+.. +.++.+++..
T Consensus       237 ~~~~~~~~~~~~~~~---~~g~d~vid~~g~~~~~~~~~~~l~~~~G~~v~~g~~~~~~~~~~~~~~~~-~~~i~g~~~~  312 (365)
T cd08277         237 KDSDKPVSEVIREMT---GGGVDYSFECTGNADLMNEALESTKLGWGVSVVVGVPPGAELSIRPFQLIL-GRTWKGSFFG  312 (365)
T ss_pred             ccccchHHHHHHHHh---CCCCCEEEECCCChHHHHHHHHhcccCCCEEEEEcCCCccccccCHhHHhh-CCEEEeeecC
Confidence            443334555565543   368999999999877888999999875 99999986532 22333334443 7888887653


Q ss_pred             ----CCcHHHHHHHHHcCCCCCCCceEEEecCChhhHHHHHHHHhcCCCceEEEEe
Q 017868          313 ----KNTWPLCLELLRSGKIDVKPLVTHRFGFSQKEVEEAFETSARGGTAIKVMFN  364 (365)
Q Consensus       313 ----~~~~~~~~~~l~~g~~~~~~~~~~~~~~~~~~~~~a~~~~~~~~~~gk~vi~  364 (365)
                          ...+.+++++++++.+.+.+.++++|+|  +++.+|++.+++++ ..|++++
T Consensus       313 ~~~~~~~~~~~~~~~~~~~~~~~~~i~~~~~l--~~~~~A~~~~~~~~-~~k~~i~  365 (365)
T cd08277         313 GFKSRSDVPKLVSKYMNKKFDLDELITHVLPF--EEINKGFDLMKSGE-CIRTVIT  365 (365)
T ss_pred             CCChHHHHHHHHHHHHCCCcChhHheeeEEch--hhHHHHHHHHHCCC-CceEeeC
Confidence                3468899999999998778889999999  99999999998886 5698874

NAD(P)(H)-dependent oxidoreductases are the major enzymes in the interconversion of alcohols and aldehydes, or ketones. Alcohol dehydrogenase in the liver converts ethanol and NAD+ to acetaldehyde and NADH, while in yeast and some other microorganisms ADH catalyzes the conversion acetaldehyde to ethanol in alcoholic fermentation. There are 7 vertebrate ADH 7 classes, 6 of which have been identified in humans. Class III, glutathione-dependent formaldehyde dehydrogenase, has been identified as the primordial form and exists in diverse species, including plants, micro-organisms, vertebrates, and invertebrates. Class I, typified by liver dehydrogenase, is an evolving form. Gene duplication and functional specialization of ADH into ADH classes and subclasses created numerous forms in vertebrates. For example, the A, B and C (formerly alpha, beta, gamma) human class I subunits have high overall structural similarity, but differ i

>PLN02178 cinnamyl-alcohol dehydrogenase

Probab=100.00  E-value=1.7e-46  Score=346.60  Aligned_cols=327  Identities=20%  Similarity=0.327  Sum_probs=266.9

Q ss_pred             eEEEec-CCceEEEEecCCCCCCCcEEEEEeeeeeCcccHhhhhccccCCccCCCCcccCccceEEEEEeCCCCCCCCCC
Q 017868           20 AAWLLG-VNTLKIQPFELPSLGPYDVLVRMKAVGICGSDVHYLKTLRCADFVVKEPMVIGHECAGVIEKVGSEVKTLVPG   98 (365)
Q Consensus        20 ~~~~~~-~~~l~~~~~~~p~~~~~eVlI~v~~~~l~~~D~~~~~g~~~~~~~~~~p~~~G~e~~G~V~~vG~~v~~~~~G   98 (365)
                      +++..+ ++.+++.+++.|+|+++||+|||.++++|++|++.+.|...   ...+|.++|||++|+|+++|+++++|++|
T Consensus         9 ~~~~~~~~~~l~~~~~~~p~~~~~eVlVkV~a~gic~sD~~~~~G~~~---~~~~p~i~GhE~aG~Vv~vG~~v~~~~vG   85 (375)
T PLN02178          9 GWAANDESGVLSPFHFSRRENGENDVTVKILFCGVCHSDLHTIKNHWG---FSRYPIIPGHEIVGIATKVGKNVTKFKEG   85 (375)
T ss_pred             EEEEccCCCCceEEeecCCCCCCCeEEEEEEEEcCchHHHHHhcCCCC---CCCCCcccCceeeEEEEEECCCCCccCCC
Confidence            333444 36788899999999999999999999999999998876431   12458899999999999999999999999


Q ss_pred             CEEEEcCCc-CCCCCccccCCCCCCCCCccccc------cCCCCcceeeEEeecCCceEECCCCCCcchhccch-hhHHH
Q 017868           99 DRVALEPGI-SCWRCDHCKGGRYNLCPEMKFFA------TPPVHGSLANQVVHPADLCFKLPDNVSLEEGAMCE-PLSVG  170 (365)
Q Consensus        99 d~V~~~~~~-~~~~~~~~~~~~~~~~~~~~~~~------~~~~~g~~~~~~~v~~~~~~~iP~~~~~~~a~~~~-~~~~a  170 (365)
                      |||++.+.. +|++|++|+.+++++|++..+..      .....|+|+||+.+++++++++|+++++++|+.++ ...|+
T Consensus        86 drV~~~~~~~~cg~C~~C~~g~~~~C~~~~~~~~~~~~~g~~~~G~~aey~~v~~~~~~~lP~~ls~~~aa~l~~~~~ta  165 (375)
T PLN02178         86 DRVGVGVIIGSCQSCESCNQDLENYCPKVVFTYNSRSSDGTRNQGGYSDVIVVDHRFVLSIPDGLPSDSGAPLLCAGITV  165 (375)
T ss_pred             CEEEEcCccCCCCCChhHhCcchhcCCCccccccccccCCCcCCCccccEEEEchHHeEECCCCCCHHHcchhhccchHH
Confidence            999865544 69999999999999999764321      11236999999999999999999999999988776 66788


Q ss_pred             HHHHHhcC--CCCCCEEEEEcCCHHHHHHHHHHHHHCCCCeEEEEeCCh-hHHHHHHHcCCCEEEeCCCCcccHHHHHHH
Q 017868          171 LHACRRAN--IGPETNVLIMGAGPIGLVTMLGAPRAFGAPRIVIVDVDD-YRLSVAKEIGADNIVKVSTNLQDIAEEVEK  247 (365)
Q Consensus       171 ~~~~~~~~--~~~g~~vlI~G~g~~G~~ai~~l~~~~g~~~vi~v~~~~-~~~~~~~~~g~~~~~~~~~~~~~~~~~i~~  247 (365)
                      |+++....  .++|++|+|.|+|++|++++| +|+.+|++ +++++.++ ++.++++++|++.++++.+     .+.+++
T Consensus       166 ~~al~~~~~~~~~g~~VlV~G~G~vG~~avq-~Ak~~Ga~-Vi~~~~~~~~~~~~a~~lGa~~~i~~~~-----~~~v~~  238 (375)
T PLN02178        166 YSPMKYYGMTKESGKRLGVNGLGGLGHIAVK-IGKAFGLR-VTVISRSSEKEREAIDRLGADSFLVTTD-----SQKMKE  238 (375)
T ss_pred             HHHHHHhCCCCCCCCEEEEEcccHHHHHHHH-HHHHcCCe-EEEEeCChHHhHHHHHhCCCcEEEcCcC-----HHHHHH
Confidence            88885543  368999999999999999999 99999995 66665554 4578889999998876432     123443


Q ss_pred             HHHHhCCCceEEEeCCCCHHHHHHHHHhcccCCEEEEEccCCCCccccchHhhhcCcEEEeeccc-CCcHHHHHHHHHcC
Q 017868          248 IQKAMGTGIDVSFDCAGLNKTMSTALGATCAGGKVCLVGMGHHEMTVPLTPAAVREVDVVGVFRY-KNTWPLCLELLRSG  326 (365)
Q Consensus       248 ~~~~~~~~~d~vid~~g~~~~~~~~~~~l~~~G~~~~~g~~~~~~~~~~~~~~~~~~~i~~~~~~-~~~~~~~~~~l~~g  326 (365)
                      .   . .++|++||++|....+..++++++++|+++.+|.......++...+..+++++.|++.. .+.+.++++++++|
T Consensus       239 ~---~-~~~D~vid~~G~~~~~~~~~~~l~~~G~iv~vG~~~~~~~~~~~~~~~~~~~i~g~~~~~~~~~~~~~~l~~~g  314 (375)
T PLN02178        239 A---V-GTMDFIIDTVSAEHALLPLFSLLKVSGKLVALGLPEKPLDLPIFPLVLGRKMVGGSQIGGMKETQEMLEFCAKH  314 (375)
T ss_pred             h---h-CCCcEEEECCCcHHHHHHHHHhhcCCCEEEEEccCCCCCccCHHHHHhCCeEEEEeCccCHHHHHHHHHHHHhC
Confidence            3   2 37999999999876788999999999999999875444455666677899999998765 46789999999999


Q ss_pred             CCCCCCceEEEecCChhhHHHHHHHHhcCCCceEEEEeC
Q 017868          327 KIDVKPLVTHRFGFSQKEVEEAFETSARGGTAIKVMFNL  365 (365)
Q Consensus       327 ~~~~~~~~~~~~~~~~~~~~~a~~~~~~~~~~gk~vi~~  365 (365)
                      ++.  +.+ +.|+|  +++.+|++.+++++..||+|+++
T Consensus       315 ~i~--~~i-~~~~l--~~~~~A~~~~~~~~~~gkvvi~~  348 (375)
T PLN02178        315 KIV--SDI-ELIKM--SDINSAMDRLAKSDVRYRFVIDV  348 (375)
T ss_pred             CCc--ccE-EEEeH--HHHHHHHHHHHcCCCceEEEEEe
Confidence            994  444 67888  99999999999998889999864

>TIGR02822 adh_fam_2 zinc-binding alcohol dehydrogenase family protein

Probab=100.00  E-value=6.1e-46  Score=338.05  Aligned_cols=312  Identities=22%  Similarity=0.302  Sum_probs=266.9

Q ss_pred             CceEEEEecCCCCCCCcEEEEEeeeeeCcccHhhhhccccCCccCCCCcccCccceEEEEEeCCCCCCCCCCCEEEEcCC
Q 017868           27 NTLKIQPFELPSLGPYDVLVRMKAVGICGSDVHYLKTLRCADFVVKEPMVIGHECAGVIEKVGSEVKTLVPGDRVALEPG  106 (365)
Q Consensus        27 ~~l~~~~~~~p~~~~~eVlI~v~~~~l~~~D~~~~~g~~~~~~~~~~p~~~G~e~~G~V~~vG~~v~~~~~Gd~V~~~~~  106 (365)
                      ..++++++|.|.|+++||+|||.++++|++|++...|.+..   ..+|.++|||++|+|+++|+++++|++||||++.+.
T Consensus        13 ~~l~~~~~p~P~~~~~evlVkv~~~gi~~~D~~~~~g~~~~---~~~p~i~G~e~~G~V~~vG~~v~~~~~Gd~V~~~~~   89 (329)
T TIGR02822        13 GPLRFVERPVPRPGPGELLVRVRACGVCRTDLHVSEGDLPV---HRPRVTPGHEVVGEVAGRGADAGGFAVGDRVGIAWL   89 (329)
T ss_pred             CCceEEeCCCCCCCCCeEEEEEEEEeecchhHHHHcCCCCC---CCCCccCCcceEEEEEEECCCCcccCCCCEEEEcCc
Confidence            46899999999999999999999999999999988875321   234789999999999999999999999999987543


Q ss_pred             -cCCCCCccccCCCCCCCCCccccccCCCCcceeeEEeecCCceEECCCCCCcchhccch-hhHHHHHHHHhcCCCCCCE
Q 017868          107 -ISCWRCDHCKGGRYNLCPEMKFFATPPVHGSLANQVVHPADLCFKLPDNVSLEEGAMCE-PLSVGLHACRRANIGPETN  184 (365)
Q Consensus       107 -~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~v~~~~~~~iP~~~~~~~a~~~~-~~~~a~~~~~~~~~~~g~~  184 (365)
                       .+|+.|.+|..+.+++|+.....+. ..+|+|+||+.+++.+++++|+++++++++.++ .+.|||++++.+++++|++
T Consensus        90 ~~~c~~c~~c~~g~~~~c~~~~~~g~-~~~G~~aey~~v~~~~~~~lP~~~~~~~aa~l~~~~~ta~~~~~~~~~~~g~~  168 (329)
T TIGR02822        90 RRTCGVCRYCRRGAENLCPASRYTGW-DTDGGYAEYTTVPAAFAYRLPTGYDDVELAPLLCAGIIGYRALLRASLPPGGR  168 (329)
T ss_pred             cCcCCCChHHhCcCcccCCCcccCCc-ccCCcceeEEEeccccEEECCCCCCHHHhHHHhccchHHHHHHHhcCCCCCCE
Confidence             4799999999999999998776654 357999999999999999999999999988765 7889999998888999999


Q ss_pred             EEEEcCCHHHHHHHHHHHHHCCCCeEEEEeCChhHHHHHHHcCCCEEEeCCCCcccHHHHHHHHHHHhCCCceEEEeCCC
Q 017868          185 VLIMGAGPIGLVTMLGAPRAFGAPRIVIVDVDDYRLSVAKEIGADNIVKVSTNLQDIAEEVEKIQKAMGTGIDVSFDCAG  264 (365)
Q Consensus       185 vlI~G~g~~G~~ai~~l~~~~g~~~vi~v~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~i~~~~~~~~~~~d~vid~~g  264 (365)
                      |||+|+|++|++++| +++..|+ .+++++++++|.++++++|++++++....              ...++|+++++.+
T Consensus       169 VlV~G~g~iG~~a~~-~a~~~G~-~vi~~~~~~~~~~~a~~~Ga~~vi~~~~~--------------~~~~~d~~i~~~~  232 (329)
T TIGR02822       169 LGLYGFGGSAHLTAQ-VALAQGA-TVHVMTRGAAARRLALALGAASAGGAYDT--------------PPEPLDAAILFAP  232 (329)
T ss_pred             EEEEcCCHHHHHHHH-HHHHCCC-eEEEEeCChHHHHHHHHhCCceecccccc--------------CcccceEEEECCC
Confidence            999999999999999 9999999 58888899999999999999988763210              0246899999888


Q ss_pred             CHHHHHHHHHhcccCCEEEEEccCCC-CccccchHhhhcCcEEEeeccc-CCcHHHHHHHHHcCCCCCCCceEEEecCCh
Q 017868          265 LNKTMSTALGATCAGGKVCLVGMGHH-EMTVPLTPAAVREVDVVGVFRY-KNTWPLCLELLRSGKIDVKPLVTHRFGFSQ  342 (365)
Q Consensus       265 ~~~~~~~~~~~l~~~G~~~~~g~~~~-~~~~~~~~~~~~~~~i~~~~~~-~~~~~~~~~~l~~g~~~~~~~~~~~~~~~~  342 (365)
                      ....+..++++++++|+++.+|.... ...++...+..+++++.+++.. ...+.+++++++++++.   +++++|+|  
T Consensus       233 ~~~~~~~~~~~l~~~G~~v~~G~~~~~~~~~~~~~~~~~~~~i~g~~~~~~~~~~~~~~l~~~g~i~---~i~~~~~l--  307 (329)
T TIGR02822       233 AGGLVPPALEALDRGGVLAVAGIHLTDTPPLNYQRHLFYERQIRSVTSNTRADAREFLELAAQHGVR---VTTHTYPL--  307 (329)
T ss_pred             cHHHHHHHHHhhCCCcEEEEEeccCccCCCCCHHHHhhCCcEEEEeecCCHHHHHHHHHHHHhCCCe---eEEEEEeH--
Confidence            77789999999999999999986432 2244455567788999987655 45688899999999983   35788988  


Q ss_pred             hhHHHHHHHHhcCCCceEEEE
Q 017868          343 KEVEEAFETSARGGTAIKVMF  363 (365)
Q Consensus       343 ~~~~~a~~~~~~~~~~gk~vi  363 (365)
                      +++++|++.+.+++..||+||
T Consensus       308 ~~~~~A~~~~~~~~~~Gkvvl  328 (329)
T TIGR02822       308 SEADRALRDLKAGRFDGAAVL  328 (329)
T ss_pred             HHHHHHHHHHHcCCCceEEEe
Confidence            999999999999999999987

Members of this model form a distinct subset of the larger family of oxidoreductases that includes zinc-binding alcohol dehydrogenases and NADPH:quinone reductases (pfam00107). The gene neighborhood of members of this family is not conserved and it appears that no members are characterized. The sequence of the family includes 6 invariant cysteine residues and one invariant histidine. It appears that no member is characterized.

>cd08237 ribitol-5-phosphate_DH ribitol-5-phosphate dehydrogenase

Probab=100.00  E-value=4.1e-46  Score=341.00  Aligned_cols=325  Identities=23%  Similarity=0.331  Sum_probs=259.4

Q ss_pred             cceeEEEecCCceEEEEecCCCCCCCcEEEEEeeeeeCcccHhhhhccccCCc-cCCCCcccCccceEEEEEeCCCCCCC
Q 017868           17 VNMAAWLLGVNTLKIQPFELPSLGPYDVLVRMKAVGICGSDVHYLKTLRCADF-VVKEPMVIGHECAGVIEKVGSEVKTL   95 (365)
Q Consensus        17 ~~~~~~~~~~~~l~~~~~~~p~~~~~eVlI~v~~~~l~~~D~~~~~g~~~~~~-~~~~p~~~G~e~~G~V~~vG~~v~~~   95 (365)
                      ..+++++.+++.++++++|.|+ +++||+|||.++|||++|++.+.|.+.... ...+|.++|||++|+|+++|.+  +|
T Consensus         2 ~~~~~~~~~~~~~~~~~~~~P~-~~~eVlVkv~a~gIc~sD~~~~~G~~~~~~~~~~~P~i~GhE~~G~V~~~g~~--~~   78 (341)
T cd08237           2 INQVYRLVRPKFFEVTYEEENL-REDWVIVRPTYLSICHADQRYYQGNRSPEALKKKLPMALIHEGIGVVVSDPTG--TY   78 (341)
T ss_pred             cccceEEeccceEEEeecCCCC-CCCeEEEEEEEEEEcCccHHHHcCCCCcccccCCCCeeccceeEEEEEeeCCC--cc
Confidence            4688899999999999999995 999999999999999999999887542211 1357999999999999998764  69


Q ss_pred             CCCCEEEEcCCcCCCCCccccCCCCCCCCCccccccCCCCcceeeEEeecCCceEECCCCCCcchhccchhhHHHHHHHH
Q 017868           96 VPGDRVALEPGISCWRCDHCKGGRYNLCPEMKFFATPPVHGSLANQVVHPADLCFKLPDNVSLEEGAMCEPLSVGLHACR  175 (365)
Q Consensus        96 ~~Gd~V~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~v~~~~~~~iP~~~~~~~a~~~~~~~~a~~~~~  175 (365)
                      ++||||++.+..+|+ |..|.  ..++|.+..+.+. ..+|+|+||+++++++++++|+++++++|+++.+++++++++.
T Consensus        79 ~vGdrV~~~~~~~~~-~~~~~--~~~~c~~~~~~g~-~~~G~~aey~~v~~~~~~~vP~~l~~~~aa~~~~~~~a~~a~~  154 (341)
T cd08237          79 KVGTKVVMVPNTPVE-KDEII--PENYLPSSRFRSS-GYDGFMQDYVFLPPDRLVKLPDNVDPEVAAFTELVSVGVHAIS  154 (341)
T ss_pred             CCCCEEEECCCCCch-hcccc--hhccCCCcceeEe-cCCCceEEEEEEchHHeEECCCCCChHHhhhhchHHHHHHHHH
Confidence            999999998887777 44553  4577877655543 3469999999999999999999999999988889999999884


Q ss_pred             h---cCCCCCCEEEEEcCCHHHHHHHHHHHHH-CCCCeEEEEeCChhHHHHHHHcCCCEEEeCCCCcccHHHHHHHHHHH
Q 017868          176 R---ANIGPETNVLIMGAGPIGLVTMLGAPRA-FGAPRIVIVDVDDYRLSVAKEIGADNIVKVSTNLQDIAEEVEKIQKA  251 (365)
Q Consensus       176 ~---~~~~~g~~vlI~G~g~~G~~ai~~l~~~-~g~~~vi~v~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~i~~~~~~  251 (365)
                      .   ..+++|++|||.|+|++|++++| +++. .|..+|++++++++|++++++++++..++      +       +.+ 
T Consensus       155 ~~~~~~~~~g~~VlV~G~G~vGl~~~~-~a~~~~g~~~vi~~~~~~~k~~~a~~~~~~~~~~------~-------~~~-  219 (341)
T cd08237         155 RFEQIAHKDRNVIGVWGDGNLGYITAL-LLKQIYPESKLVVFGKHQEKLDLFSFADETYLID------D-------IPE-  219 (341)
T ss_pred             HHhhcCCCCCCEEEEECCCHHHHHHHH-HHHHhcCCCcEEEEeCcHhHHHHHhhcCceeehh------h-------hhh-
Confidence            3   45789999999999999999999 6664 67667888899999999998766543211      1       111 


Q ss_pred             hCCCceEEEeCCC---CHHHHHHHHHhcccCCEEEEEccCCCCccccchHhhhcCcEEEeeccc-CCcHHHHHHHHHcC-
Q 017868          252 MGTGIDVSFDCAG---LNKTMSTALGATCAGGKVCLVGMGHHEMTVPLTPAAVREVDVVGVFRY-KNTWPLCLELLRSG-  326 (365)
Q Consensus       252 ~~~~~d~vid~~g---~~~~~~~~~~~l~~~G~~~~~g~~~~~~~~~~~~~~~~~~~i~~~~~~-~~~~~~~~~~l~~g-  326 (365)
                       ..++|+|||++|   .+..+..++++++++|+++.+|.......++...++.+++++.++... .+++++++++++++ 
T Consensus       220 -~~g~d~viD~~G~~~~~~~~~~~~~~l~~~G~iv~~G~~~~~~~~~~~~~~~k~~~i~g~~~~~~~~~~~~~~~~~~~~  298 (341)
T cd08237         220 -DLAVDHAFECVGGRGSQSAINQIIDYIRPQGTIGLMGVSEYPVPINTRMVLEKGLTLVGSSRSTREDFERAVELLSRNP  298 (341)
T ss_pred             -ccCCcEEEECCCCCccHHHHHHHHHhCcCCcEEEEEeecCCCcccCHHHHhhCceEEEEecccCHHHHHHHHHHHHhCC
Confidence             246999999999   456788999999999999999875444455556678899999998765 46789999999999 


Q ss_pred             --CCCCCCceEEEecCC-hhhHHHHHHHHhcCCCceEEEEeC
Q 017868          327 --KIDVKPLVTHRFGFS-QKEVEEAFETSARGGTAIKVMFNL  365 (365)
Q Consensus       327 --~~~~~~~~~~~~~~~-~~~~~~a~~~~~~~~~~gk~vi~~  365 (365)
                        ...+.+.++++|+++ ++++.+|++...++ ..||+||++
T Consensus       299 ~~~~~l~~~i~~~~~l~~l~~~~~a~~~~~~~-~~gKvvi~~  339 (341)
T cd08237         299 EVAEYLRKLVGGVFPVRSINDIHRAFESDLTN-SWGKTVMEW  339 (341)
T ss_pred             cccCChHHHhccccccccHHHHHHHHHHHhhc-CcceEEEEe
Confidence              234578888999872 24566666665554 789999874

NAD-linked ribitol-5-phosphate dehydrogenase, a member of the MDR/zinc-dependent alcohol dehydrogenase-like family, oxidizes the phosphate ester of ribitol-5-phosphate to xylulose-5-phosphate of the pentose phosphate pathway. The medium chain dehydrogenases/reductase (MDR)/zinc-dependent alcohol dehydrogenase-like family, which contains the zinc-dependent alcohol dehydrogenase (ADH-Zn) and related proteins, is a diverse group of proteins related to the first identified member, class I mammalian ADH. MDRs display a broad range of activities and are distinguished from the smaller short chain dehydrogenases (~ 250 amino acids vs. the ~ 350 amino acids of the MDR). The MDR proteins have 2 domains: a C-terminal NAD(P) binding-Rossmann fold domain of a beta-alpha form and an N-terminal catalytic domain with distant homology to GroES. The MDR group contains a host of activities, including the founding alcohol dehydrogenase (

>KOG1197 consensus Predicted quinone oxidoreductase [Energy production and conversion; General function prediction only]

Probab=100.00  E-value=7.2e-46  Score=303.47  Aligned_cols=310  Identities=27%  Similarity=0.368  Sum_probs=266.2

Q ss_pred             cchhcceeEEEe---cCCceEEEEecCCCCCCCcEEEEEeeeeeCcccHhhhhccccCCccCCCCcccCccceEEEEEeC
Q 017868           13 DGEEVNMAAWLL---GVNTLKIQPFELPSLGPYDVLVRMKAVGICGSDVHYLKTLRCADFVVKEPMVIGHECAGVIEKVG   89 (365)
Q Consensus        13 ~~~~~~~~~~~~---~~~~l~~~~~~~p~~~~~eVlI~v~~~~l~~~D~~~~~g~~~~~~~~~~p~~~G~e~~G~V~~vG   89 (365)
                      ..++..+.++++   +.+.+++++.|.|+|.|+|++||-.|+|+|+.|.-..+|.+.   +...|++||.|++|+|+++|
T Consensus         4 ~~p~~~k~i~v~e~Ggydvlk~ed~pv~~papgel~iknka~GlNfid~y~RkGlY~---~~plPytpGmEaaGvVvAvG   80 (336)
T KOG1197|consen    4 ASPPLLKCIVVTEFGGYDVLKLEDRPVPPPAPGELTIKNKACGLNFIDLYFRKGLYD---PAPLPYTPGMEAAGVVVAVG   80 (336)
T ss_pred             CCCchheEEEEeccCCcceEEEeeecCCCCCCCceEEeehhcCccHHHHHHhccccC---CCCCCcCCCcccceEEEEec
Confidence            345667777777   357999999999999999999999999999999998888753   35779999999999999999


Q ss_pred             CCCCCCCCCCEEEEcCCcCCCCCccccCCCCCCCCCccccccCCCCcceeeEEeecCCceEECCCCCCcchhccch-hhH
Q 017868           90 SEVKTLVPGDRVALEPGISCWRCDHCKGGRYNLCPEMKFFATPPVHGSLANQVVHPADLCFKLPDNVSLEEGAMCE-PLS  168 (365)
Q Consensus        90 ~~v~~~~~Gd~V~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~v~~~~~~~iP~~~~~~~a~~~~-~~~  168 (365)
                      ++|+++++||||+..                            +..|.|+|+..+|...++++|+.+++++|+.+. -..
T Consensus        81 ~gvtdrkvGDrVayl----------------------------~~~g~yaee~~vP~~kv~~vpe~i~~k~aaa~llq~l  132 (336)
T KOG1197|consen   81 EGVTDRKVGDRVAYL----------------------------NPFGAYAEEVTVPSVKVFKVPEAITLKEAAALLLQGL  132 (336)
T ss_pred             CCccccccccEEEEe----------------------------ccchhhheeccccceeeccCCcccCHHHHHHHHHHHH
Confidence            999999999999875                            356999999999999999999999999988775 788


Q ss_pred             HHHHHHH-hcCCCCCCEEEEEc-CCHHHHHHHHHHHHHCCCCeEEEEeCChhHHHHHHHcCCCEEEeCCCCcccHHHHHH
Q 017868          169 VGLHACR-RANIGPETNVLIMG-AGPIGLVTMLGAPRAFGAPRIVIVDVDDYRLSVAKEIGADNIVKVSTNLQDIAEEVE  246 (365)
Q Consensus       169 ~a~~~~~-~~~~~~g~~vlI~G-~g~~G~~ai~~l~~~~g~~~vi~v~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~i~  246 (365)
                      |||..++ ..++++|++|||+. +|++|++++| +++..|+ ++|++.++.+|++.+++.|+.+.|+++.  +|+.++++
T Consensus       133 TAy~ll~e~y~vkpGhtVlvhaAAGGVGlll~Q-l~ra~~a-~tI~~asTaeK~~~akenG~~h~I~y~~--eD~v~~V~  208 (336)
T KOG1197|consen  133 TAYMLLFEAYNVKPGHTVLVHAAAGGVGLLLCQ-LLRAVGA-HTIATASTAEKHEIAKENGAEHPIDYST--EDYVDEVK  208 (336)
T ss_pred             HHHHHHHHhcCCCCCCEEEEEeccccHHHHHHH-HHHhcCc-EEEEEeccHHHHHHHHhcCCcceeeccc--hhHHHHHH
Confidence            8998875 57899999999996 4999999999 9999999 7888889999999999999999999754  89999999


Q ss_pred             HHHHHhCCCceEEEeCCCCHHHHHHHHHhcccCCEEEEEccCCCCc-cccchHhhhcCcEEEeec--cc---CC----cH
Q 017868          247 KIQKAMGTGIDVSFDCAGLNKTMSTALGATCAGGKVCLVGMGHHEM-TVPLTPAAVREVDVVGVF--RY---KN----TW  316 (365)
Q Consensus       247 ~~~~~~~~~~d~vid~~g~~~~~~~~~~~l~~~G~~~~~g~~~~~~-~~~~~~~~~~~~~i~~~~--~~---~~----~~  316 (365)
                      +++.  ++|+|+++|.+|. +.+...+.+|++.|.++.+|+.+... ++++..++.+.+++..-.  .+   ..    ..
T Consensus       209 kiTn--gKGVd~vyDsvG~-dt~~~sl~~Lk~~G~mVSfG~asgl~~p~~l~~ls~k~l~lvrpsl~gYi~g~~el~~~v  285 (336)
T KOG1197|consen  209 KITN--GKGVDAVYDSVGK-DTFAKSLAALKPMGKMVSFGNASGLIDPIPLNQLSPKALQLVRPSLLGYIDGEVELVSYV  285 (336)
T ss_pred             hccC--CCCceeeeccccc-hhhHHHHHHhccCceEEEeccccCCCCCeehhhcChhhhhhccHhhhcccCCHHHHHHHH
Confidence            8865  8999999999996 48999999999999999999765533 455555666655544322  22   11    34


Q ss_pred             HHHHHHHHcCCCCCCCceEEEecCChhhHHHHHHHHhcCCCceEEEEe
Q 017868          317 PLCLELLRSGKIDVKPLVTHRFGFSQKEVEEAFETSARGGTAIKVMFN  364 (365)
Q Consensus       317 ~~~~~~l~~g~~~~~~~~~~~~~~~~~~~~~a~~~~~~~~~~gk~vi~  364 (365)
                      .+.+.++.+|.+  ++.+.|+|||  +++.+|+.++++....||+++.
T Consensus       286 ~rl~alvnsg~l--k~~I~~~ypl--s~vadA~~diesrktvGkvlLl  329 (336)
T KOG1197|consen  286 ARLFALVNSGHL--KIHIDHVYPL--SKVADAHADIESRKTVGKVLLL  329 (336)
T ss_pred             HHHHHHhhcCcc--ceeeeeecch--HHHHHHHHHHHhhhccceEEEe
Confidence            567778888988  8889999999  9999999999999999999985

>PLN02514 cinnamyl-alcohol dehydrogenase

Probab=100.00  E-value=1.5e-44  Score=332.79  Aligned_cols=331  Identities=20%  Similarity=0.301  Sum_probs=270.3

Q ss_pred             hcceeEEEecC-CceEEEEecCCCCCCCcEEEEEeeeeeCcccHhhhhccccCCccCCCCcccCccceEEEEEeCCCCCC
Q 017868           16 EVNMAAWLLGV-NTLKIQPFELPSLGPYDVLVRMKAVGICGSDVHYLKTLRCADFVVKEPMVIGHECAGVIEKVGSEVKT   94 (365)
Q Consensus        16 ~~~~~~~~~~~-~~l~~~~~~~p~~~~~eVlI~v~~~~l~~~D~~~~~g~~~~~~~~~~p~~~G~e~~G~V~~vG~~v~~   94 (365)
                      ..+++++...+ +++++.+++.|+++++||+|||.++++|++|+..+.|....   ..+|.++|||++|+|+++|+++++
T Consensus         8 ~~~~~~~~~~~~~~~~~~~~~~p~~~~~eVlVrv~a~gi~~~D~~~~~g~~~~---~~~p~i~G~E~~G~Vv~vG~~v~~   84 (357)
T PLN02514          8 KKTTGWAARDPSGHLSPYTYTLRKTGPEDVVIKVIYCGICHTDLHQIKNDLGM---SNYPMVPGHEVVGEVVEVGSDVSK   84 (357)
T ss_pred             ceEEEEEEecCCCCceEEeecCCCCCCCcEEEEEEEeccChHHHHhhcCCcCc---CCCCccCCceeeEEEEEECCCccc
Confidence            34778888876 58999999999999999999999999999999988764321   246889999999999999999999


Q ss_pred             CCCCCEEEEcC-CcCCCCCccccCCCCCCCCCccccc------cCCCCcceeeEEeecCCceEECCCCCCcchhccch-h
Q 017868           95 LVPGDRVALEP-GISCWRCDHCKGGRYNLCPEMKFFA------TPPVHGSLANQVVHPADLCFKLPDNVSLEEGAMCE-P  166 (365)
Q Consensus        95 ~~~Gd~V~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~------~~~~~g~~~~~~~v~~~~~~~iP~~~~~~~a~~~~-~  166 (365)
                      |++||+|++.+ ...|++|.+|..+.+++|....+..      ....+|+|+||+.++...++++|+++++++|+.++ .
T Consensus        85 ~~~Gd~V~~~~~~~~c~~C~~c~~g~~~~c~~~~~~~~~~~~~g~~~~G~~aey~~v~~~~~~~iP~~~~~~~aa~l~~~  164 (357)
T PLN02514         85 FTVGDIVGVGVIVGCCGECSPCKSDLEQYCNKRIWSYNDVYTDGKPTQGGFASAMVVDQKFVVKIPEGMAPEQAAPLLCA  164 (357)
T ss_pred             ccCCCEEEEcCccccCCCChhHhCCCcccCCCccccccccccCCccCCCccccEEEEchHHeEECCCCCCHHHhhhhhhh
Confidence            99999998644 3469999999999999998753321      11246999999999999999999999999988776 6


Q ss_pred             hHHHHHHHHh-cCCCCCCEEEEEcCCHHHHHHHHHHHHHCCCCeEEEEeCChhHHH-HHHHcCCCEEEeCCCCcccHHHH
Q 017868          167 LSVGLHACRR-ANIGPETNVLIMGAGPIGLVTMLGAPRAFGAPRIVIVDVDDYRLS-VAKEIGADNIVKVSTNLQDIAEE  244 (365)
Q Consensus       167 ~~~a~~~~~~-~~~~~g~~vlI~G~g~~G~~ai~~l~~~~g~~~vi~v~~~~~~~~-~~~~~g~~~~~~~~~~~~~~~~~  244 (365)
                      +.+||+++.. ...++|++++|+|+|++|++++| +++..|++ +++++.++++.+ .++++|++.+++..+  .   +.
T Consensus       165 ~~ta~~al~~~~~~~~g~~vlV~G~G~vG~~av~-~Ak~~G~~-vi~~~~~~~~~~~~~~~~Ga~~~i~~~~--~---~~  237 (357)
T PLN02514        165 GVTVYSPLSHFGLKQSGLRGGILGLGGVGHMGVK-IAKAMGHH-VTVISSSDKKREEALEHLGADDYLVSSD--A---AE  237 (357)
T ss_pred             HHHHHHHHHHcccCCCCCeEEEEcccHHHHHHHH-HHHHCCCe-EEEEeCCHHHHHHHHHhcCCcEEecCCC--h---HH
Confidence            7889998854 45679999999988999999999 99999995 565666666554 557799987665322  1   23


Q ss_pred             HHHHHHHhCCCceEEEeCCCCHHHHHHHHHhcccCCEEEEEccCCCCccccchHhhhcCcEEEeeccc-CCcHHHHHHHH
Q 017868          245 VEKIQKAMGTGIDVSFDCAGLNKTMSTALGATCAGGKVCLVGMGHHEMTVPLTPAAVREVDVVGVFRY-KNTWPLCLELL  323 (365)
Q Consensus       245 i~~~~~~~~~~~d~vid~~g~~~~~~~~~~~l~~~G~~~~~g~~~~~~~~~~~~~~~~~~~i~~~~~~-~~~~~~~~~~l  323 (365)
                      +++.    ..++|++||++|....+..++++++++|+++.+|.......+....+..+++++.+++.. ..+++++++++
T Consensus       238 ~~~~----~~~~D~vid~~g~~~~~~~~~~~l~~~G~iv~~G~~~~~~~~~~~~~~~~~~~i~g~~~~~~~~~~~~~~~~  313 (357)
T PLN02514        238 MQEA----ADSLDYIIDTVPVFHPLEPYLSLLKLDGKLILMGVINTPLQFVTPMLMLGRKVITGSFIGSMKETEEMLEFC  313 (357)
T ss_pred             HHHh----cCCCcEEEECCCchHHHHHHHHHhccCCEEEEECCCCCCCcccHHHHhhCCcEEEEEecCCHHHHHHHHHHH
Confidence            3332    247999999999777888999999999999999875444455566678899999998765 45789999999


Q ss_pred             HcCCCCCCCceEEEecCChhhHHHHHHHHhcCCCceEEEEeC
Q 017868          324 RSGKIDVKPLVTHRFGFSQKEVEEAFETSARGGTAIKVMFNL  365 (365)
Q Consensus       324 ~~g~~~~~~~~~~~~~~~~~~~~~a~~~~~~~~~~gk~vi~~  365 (365)
                      ++|.+  ++.+ ++|++  +++.+|++.+.++...||+++.+
T Consensus       314 ~~g~l--~~~i-~~~~l--~~~~~A~~~~~~~~~~gk~v~~~  350 (357)
T PLN02514        314 KEKGL--TSMI-EVVKM--DYVNTAFERLEKNDVRYRFVVDV  350 (357)
T ss_pred             HhCCC--cCcE-EEEcH--HHHHHHHHHHHcCCCceeEEEEc
Confidence            99987  5555 57888  99999999999998889999864

>PRK10083 putative oxidoreductase; Provisional

Probab=100.00  E-value=3.9e-44  Score=328.67  Aligned_cols=335  Identities=28%  Similarity=0.475  Sum_probs=280.1

Q ss_pred             ceeEEEecCCceEEEEecCCCCCCCcEEEEEeeeeeCcccHhhhhccccCCccCCCCcccCccceEEEEEeCCCCCCCCC
Q 017868           18 NMAAWLLGVNTLKIQPFELPSLGPYDVLVRMKAVGICGSDVHYLKTLRCADFVVKEPMVIGHECAGVIEKVGSEVKTLVP   97 (365)
Q Consensus        18 ~~~~~~~~~~~l~~~~~~~p~~~~~eVlI~v~~~~l~~~D~~~~~g~~~~~~~~~~p~~~G~e~~G~V~~vG~~v~~~~~   97 (365)
                      |+++++.+++.+++.++|.|.|.++||+||+.++++|++|+....|....   ..+|.++|||++|+|+++|++++++++
T Consensus         1 m~a~~~~~~~~~~~~~~~~p~~~~~~vlV~v~~~gi~~~d~~~~~g~~~~---~~~p~i~G~e~~G~V~~vG~~v~~~~~   77 (339)
T PRK10083          1 MKSIVIEKPNSLAIEERPIPQPAAGEVRVKVKLAGICGSDSHIYRGHNPF---AKYPRVIGHEFFGVIDAVGEGVDAARI   77 (339)
T ss_pred             CeEEEEecCCeeEEEeccCCCCCCCeEEEEEEEEEEcccchHHHcCCCCc---CCCCcccccceEEEEEEECCCCccCCC
Confidence            57888888899999999999999999999999999999999888764321   245889999999999999999999999


Q ss_pred             CCEEEEcCCcCCCCCccccCCCCCCCCCccccccCCCCcceeeEEeecCCceEECCCCCCcchhccchhhHHHHHHHHhc
Q 017868           98 GDRVALEPGISCWRCDHCKGGRYNLCPEMKFFATPPVHGSLANQVVHPADLCFKLPDNVSLEEGAMCEPLSVGLHACRRA  177 (365)
Q Consensus        98 Gd~V~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~v~~~~~~~iP~~~~~~~a~~~~~~~~a~~~~~~~  177 (365)
                      ||+|+..+..+|+.|.+|..+++++|.+....+. ...|+|+||+.++...++++|++++++.++...++.+++++++..
T Consensus        78 Gd~V~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~~~g~~~~~~~~~~~~~~~ip~~~~~~~a~~~~~~~~a~~~~~~~  156 (339)
T PRK10083         78 GERVAVDPVISCGHCYPCSIGKPNVCTSLVVLGV-HRDGGFSEYAVVPAKNAHRIPDAIADQYAVMVEPFTIAANVTGRT  156 (339)
T ss_pred             CCEEEEccccCCCCCccccCcCcccCCCCceEEE-ccCCcceeeEEechHHeEECcCCCCHHHHhhhchHHHHHHHHHhc
Confidence            9999999999999999999999999987766543 246999999999999999999999998887666778888766788


Q ss_pred             CCCCCCEEEEEcCCHHHHHHHHHHHHH-CCCCeEEEEeCChhHHHHHHHcCCCEEEeCCCCcccHHHHHHHHHHHhCCCc
Q 017868          178 NIGPETNVLIMGAGPIGLVTMLGAPRA-FGAPRIVIVDVDDYRLSVAKEIGADNIVKVSTNLQDIAEEVEKIQKAMGTGI  256 (365)
Q Consensus       178 ~~~~g~~vlI~G~g~~G~~ai~~l~~~-~g~~~vi~v~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~i~~~~~~~~~~~  256 (365)
                      ++++|++|||+|+|++|++++| +++. +|++.+++++++++|.++++++|++.++++.+  .++.+.+..    .+.++
T Consensus       157 ~~~~g~~vlI~g~g~vG~~~~~-~a~~~~G~~~v~~~~~~~~~~~~~~~~Ga~~~i~~~~--~~~~~~~~~----~g~~~  229 (339)
T PRK10083        157 GPTEQDVALIYGAGPVGLTIVQ-VLKGVYNVKAVIVADRIDERLALAKESGADWVINNAQ--EPLGEALEE----KGIKP  229 (339)
T ss_pred             CCCCCCEEEEECCCHHHHHHHH-HHHHhCCCCEEEEEcCCHHHHHHHHHhCCcEEecCcc--ccHHHHHhc----CCCCC
Confidence            9999999999999999999999 8885 69988888999999999999999988877543  445444422    14456


Q ss_pred             eEEEeCCCCHHHHHHHHHhcccCCEEEEEccCCCCccccchHhhhcCcEEEeecccCCcHHHHHHHHHcCCCCCCCceEE
Q 017868          257 DVSFDCAGLNKTMSTALGATCAGGKVCLVGMGHHEMTVPLTPAAVREVDVVGVFRYKNTWPLCLELLRSGKIDVKPLVTH  336 (365)
Q Consensus       257 d~vid~~g~~~~~~~~~~~l~~~G~~~~~g~~~~~~~~~~~~~~~~~~~i~~~~~~~~~~~~~~~~l~~g~~~~~~~~~~  336 (365)
                      |++||++|.+..+..++++++++|+++.+|............+..+.+++.+.....+.+.+++++++++.+.+...+++
T Consensus       230 d~vid~~g~~~~~~~~~~~l~~~G~~v~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~l~~~~~~~~  309 (339)
T PRK10083        230 TLIIDAACHPSILEEAVTLASPAARIVLMGFSSEPSEIVQQGITGKELSIFSSRLNANKFPVVIDWLSKGLIDPEKLITH  309 (339)
T ss_pred             CEEEECCCCHHHHHHHHHHhhcCCEEEEEccCCCCceecHHHHhhcceEEEEEecChhhHHHHHHHHHcCCCChHHheee
Confidence            79999999777889999999999999999865433233333445677787776555677999999999999854435778


Q ss_pred             EecCChhhHHHHHHHHhcC-CCceEEEEeC
Q 017868          337 RFGFSQKEVEEAFETSARG-GTAIKVMFNL  365 (365)
Q Consensus       337 ~~~~~~~~~~~a~~~~~~~-~~~gk~vi~~  365 (365)
                      +|++  +++++|++.+.++ ...+|+++++
T Consensus       310 ~~~l--~~~~~a~~~~~~~~~~~~kvvv~~  337 (339)
T PRK10083        310 TFDF--QHVADAIELFEKDQRHCCKVLLTF  337 (339)
T ss_pred             eecH--HHHHHHHHHHhcCCCceEEEEEec
Confidence            8888  9999999998865 4679999875

>cd08231 MDR_TM0436_like Hypothetical enzyme TM0436 resembles the zinc-dependent alcohol dehydrogenases (ADH)

Probab=100.00  E-value=5.4e-44  Score=330.41  Aligned_cols=338  Identities=31%  Similarity=0.515  Sum_probs=281.2

Q ss_pred             eeEEEecCC-ceEEEEecCCCCCCCcEEEEEeeeeeCcccHhhhhccccCCccCCCCcccCccceEEEEEeCCCCCC---
Q 017868           19 MAAWLLGVN-TLKIQPFELPSLGPYDVLVRMKAVGICGSDVHYLKTLRCADFVVKEPMVIGHECAGVIEKVGSEVKT---   94 (365)
Q Consensus        19 ~~~~~~~~~-~l~~~~~~~p~~~~~eVlI~v~~~~l~~~D~~~~~g~~~~~~~~~~p~~~G~e~~G~V~~vG~~v~~---   94 (365)
                      |++++.+.+ .+++++.+.|.|+++||+|||.++++|+.|+....|.+..   ..+|.++|||++|+|+++|+++++   
T Consensus         2 ka~~~~~~~~~l~~~~~~~p~~~~~evlV~v~a~~l~~~d~~~~~g~~~~---~~~p~~~G~e~~G~V~~vG~~v~~~~~   78 (361)
T cd08231           2 RAAVLTGPGKPLEIREVPLPDLEPGAVLVRVRLAGVCGSDVHTVAGRRPR---VPLPIILGHEGVGRVVALGGGVTTDVA   78 (361)
T ss_pred             eEEEEcCCCCCCEEEeccCCCCCCCeEEEEEEEEeecCccHHHhcCCCCC---CCCCcccccCCceEEEEeCCCcccccc
Confidence            678888765 9999999999999999999999999999999988775321   356889999999999999999986   


Q ss_pred             ---CCCCCEEEEcCCcCCCCCccccCCCCCCCCCccccccC------CCCcceeeEEeecCC-ceEECCCCCCcchhccc
Q 017868           95 ---LVPGDRVALEPGISCWRCDHCKGGRYNLCPEMKFFATP------PVHGSLANQVVHPAD-LCFKLPDNVSLEEGAMC  164 (365)
Q Consensus        95 ---~~~Gd~V~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~------~~~g~~~~~~~v~~~-~~~~iP~~~~~~~a~~~  164 (365)
                         |++||+|++.+..+|++|.+|+.+.+++|+...+++..      ...|+|+||+.++++ +++++|+++++++++.+
T Consensus        79 ~~~~~~Gd~V~~~~~~~~~~c~~~~~~~~~~c~~~~~~~~~~~~~~~~~~g~~a~~~~v~~~~~~~~lP~~~~~~~aa~~  158 (361)
T cd08231          79 GEPLKVGDRVTWSVGAPCGRCYRCLVGDPTKCENRKKYGHEASCDDPHLSGGYAEHIYLPPGTAIVRVPDNVPDEVAAPA  158 (361)
T ss_pred             CCccCCCCEEEEcccCCCCCChhHhCcCccccccchhccccccccCCCCCcccceEEEecCCCceEECCCCCCHHHHHHh
Confidence               99999999999999999999999999999987665542      246999999999986 79999999999888888


Q ss_pred             -hhhHHHHHHHHh-cCCCCCCEEEEEcCCHHHHHHHHHHHHHCCCCeEEEEeCChhHHHHHHHcCCCEEEeCCCCc-ccH
Q 017868          165 -EPLSVGLHACRR-ANIGPETNVLIMGAGPIGLVTMLGAPRAFGAPRIVIVDVDDYRLSVAKEIGADNIVKVSTNL-QDI  241 (365)
Q Consensus       165 -~~~~~a~~~~~~-~~~~~g~~vlI~G~g~~G~~ai~~l~~~~g~~~vi~v~~~~~~~~~~~~~g~~~~~~~~~~~-~~~  241 (365)
                       .++.|||++++. ...++|++|||+|+|++|+++++ +++.+|++.++++++++++.++++++|++.++++.... .++
T Consensus       159 ~~~~~ta~~al~~~~~~~~g~~vlI~g~g~vG~~~~~-lak~~G~~~v~~~~~~~~~~~~~~~~g~~~vi~~~~~~~~~~  237 (361)
T cd08231         159 NCALATVLAALDRAGPVGAGDTVVVQGAGPLGLYAVA-AAKLAGARRVIVIDGSPERLELAREFGADATIDIDELPDPQR  237 (361)
T ss_pred             cCHHHHHHHHHHhccCCCCCCEEEEECCCHHHHHHHH-HHHHcCCCeEEEEcCCHHHHHHHHHcCCCeEEcCcccccHHH
Confidence             488999999865 44569999999998999999999 99999996688888899999999999998887754321 122


Q ss_pred             HHHHHHHHHHhCCCceEEEeCCCCHHHHHHHHHhcccCCEEEEEccCCC--CccccchHhhhcCcEEEeeccc-CCcHHH
Q 017868          242 AEEVEKIQKAMGTGIDVSFDCAGLNKTMSTALGATCAGGKVCLVGMGHH--EMTVPLTPAAVREVDVVGVFRY-KNTWPL  318 (365)
Q Consensus       242 ~~~i~~~~~~~~~~~d~vid~~g~~~~~~~~~~~l~~~G~~~~~g~~~~--~~~~~~~~~~~~~~~i~~~~~~-~~~~~~  318 (365)
                      ...+++..  .+.++|++||++|....+..++++++++|+++.+|....  ...+....++.+++++.+++.. .+.+++
T Consensus       238 ~~~i~~~~--~~~~~d~vid~~g~~~~~~~~~~~l~~~G~~v~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  315 (361)
T cd08231         238 RAIVRDIT--GGRGADVVIEASGHPAAVPEGLELLRRGGTYVLVGSVAPAGTVPLDPERIVRKNLTIIGVHNYDPSHLYR  315 (361)
T ss_pred             HHHHHHHh--CCCCCcEEEECCCChHHHHHHHHHhccCCEEEEEcCCCCCCccccCHHHHhhcccEEEEcccCCchhHHH
Confidence            23455443  257899999999976678899999999999999986432  2233334468889999988765 567899


Q ss_pred             HHHHHHcC--CCCCCCceEEEecCChhhHHHHHHHHhcCCCceEEEEeC
Q 017868          319 CLELLRSG--KIDVKPLVTHRFGFSQKEVEEAFETSARGGTAIKVMFNL  365 (365)
Q Consensus       319 ~~~~l~~g--~~~~~~~~~~~~~~~~~~~~~a~~~~~~~~~~gk~vi~~  365 (365)
                      +++++.++  .+.+.+.++++|++  +++.+|++.+.++. .+|+||+.
T Consensus       316 ~~~~~~~~~~~~~~~~~i~~~~~l--~~~~~a~~~~~~~~-~~k~vi~~  361 (361)
T cd08231         316 AVRFLERTQDRFPFAELVTHRYPL--EDINEALELAESGT-ALKVVIDP  361 (361)
T ss_pred             HHHHHHhccCcCCchhheeeeeeH--HHHHHHHHHHHcCC-ceEEEeCC
Confidence            99999998  55566778899988  99999999988875 58999863

This group contains the hypothetical TM0436 alcohol dehydrogenase from Thermotoga maritima, proteins annotated as 5-exo-alcohol dehydrogenase, and other members of the medium chain dehydrogenases/reductase (MDR)/zinc-dependent alcohol dehydrogenase-like family. MDR, which contains the zinc-dependent alcohol dehydrogenase (ADH-Zn) and related proteins, is a diverse group of proteins related to the first identified member, class I mammalian ADH. MDRs display a broad range of activities and are distinguished from the smaller short chain dehydrogenases (~ 250 amino acids vs. the ~ 350 amino acids of the MDR). The MDR proteins have 2 domains: a C-terminal NAD(P) binding-Rossmann fold domain of a beta-alpha form and an N-terminal catalytic domain with distant homology to GroES. The MDR group contains a host of activities, including the founding alcohol dehydrogenase (ADH), quino

>TIGR01202 bchC 2-desacetyl-2-hydroxyethyl bacteriochlorophyllide A dehydrogenase

Probab=100.00  E-value=1e-44  Score=327.13  Aligned_cols=306  Identities=21%  Similarity=0.299  Sum_probs=249.0

Q ss_pred             cceeEEEecCCceEEEEecCCCCCCCcEEEEEeeeeeC-cccHhhhhccccCCccCCCCcccCccceEEEEEeCCCCCCC
Q 017868           17 VNMAAWLLGVNTLKIQPFELPSLGPYDVLVRMKAVGIC-GSDVHYLKTLRCADFVVKEPMVIGHECAGVIEKVGSEVKTL   95 (365)
Q Consensus        17 ~~~~~~~~~~~~l~~~~~~~p~~~~~eVlI~v~~~~l~-~~D~~~~~g~~~~~~~~~~p~~~G~e~~G~V~~vG~~v~~~   95 (365)
                      +++++++.+++.+++.+.|.|+|+++||+|||.++++| .+|...+.|.+.......+|.++|||++|+|+++|+++ +|
T Consensus         1 ~~ka~~~~~~~~l~~~e~~~p~~~~~evlVkv~~~gi~~~~D~~~~~G~~~~~~~~~~P~i~GhE~~G~V~~vG~~v-~~   79 (308)
T TIGR01202         1 KTQAIVLSGPNQIELREVTLTPPSPGDLVVEIWYSGISTGTEKLFWNGLMPPFPGMGYPLVPGYESVGRVVEAGPDT-GF   79 (308)
T ss_pred             CceEEEEeCCCeEEEEEecCCCCCCCeEEEEEEEEeeccCchhHHhcCCCCCCCCCCCCccCcceeEEEEEEecCCC-CC
Confidence            47888999899999999999999999999999999997 58988877754221113569999999999999999998 59


Q ss_pred             CCCCEEEEcCCcCCCCCccccCCCCCCCCCccccccCCCCcceeeEEeecCCceEECCCCCCcchhccchhhHHHHHHHH
Q 017868           96 VPGDRVALEPGISCWRCDHCKGGRYNLCPEMKFFATPPVHGSLANQVVHPADLCFKLPDNVSLEEGAMCEPLSVGLHACR  175 (365)
Q Consensus        96 ~~Gd~V~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~v~~~~~~~iP~~~~~~~a~~~~~~~~a~~~~~  175 (365)
                      ++||||+..    |..|..|..               ...|+|+||+.++++.++++|++++++. +.+++..|||++++
T Consensus        80 ~vGdrV~~~----~~~c~~~~~---------------~~~G~~aey~~v~~~~~~~ip~~~~~~~-a~~~~~~~a~~~~~  139 (308)
T TIGR01202        80 RPGDRVFVP----GSNCYEDVR---------------GLFGGASKRLVTPASRVCRLDPALGPQG-ALLALAATARHAVA  139 (308)
T ss_pred             CCCCEEEEe----Ccccccccc---------------ccCCcccceEEcCHHHceeCCCCCCHHH-HhhhHHHHHHHHHH
Confidence            999999873    222333211               1359999999999999999999999764 55567789999987


Q ss_pred             hcCCCCCCEEEEEcCCHHHHHHHHHHHHHCCCCeEEEEeCChhHHHHHHHcCCCEEEeCCCCcccHHHHHHHHHHHhCCC
Q 017868          176 RANIGPETNVLIMGAGPIGLVTMLGAPRAFGAPRIVIVDVDDYRLSVAKEIGADNIVKVSTNLQDIAEEVEKIQKAMGTG  255 (365)
Q Consensus       176 ~~~~~~g~~vlI~G~g~~G~~ai~~l~~~~g~~~vi~v~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~i~~~~~~~~~~  255 (365)
                      ... .+++++||+|+|++|++++| +++.+|++++++++.+++|.+.++++   .++++..   +           .+.+
T Consensus       140 ~~~-~~~~~vlV~G~G~vG~~a~q-~ak~~G~~~v~~~~~~~~rl~~a~~~---~~i~~~~---~-----------~~~g  200 (308)
T TIGR01202       140 GAE-VKVLPDLIVGHGTLGRLLAR-LTKAAGGSPPAVWETNPRRRDGATGY---EVLDPEK---D-----------PRRD  200 (308)
T ss_pred             hcc-cCCCcEEEECCCHHHHHHHH-HHHHcCCceEEEeCCCHHHHHhhhhc---cccChhh---c-----------cCCC
Confidence            643 46889999999999999999 99999998788888888887766553   2332111   0           1468


Q ss_pred             ceEEEeCCCCHHHHHHHHHhcccCCEEEEEccCCCCccccchHhhhcCcEEEeeccc-CCcHHHHHHHHHcCCCCCCCce
Q 017868          256 IDVSFDCAGLNKTMSTALGATCAGGKVCLVGMGHHEMTVPLTPAAVREVDVVGVFRY-KNTWPLCLELLRSGKIDVKPLV  334 (365)
Q Consensus       256 ~d~vid~~g~~~~~~~~~~~l~~~G~~~~~g~~~~~~~~~~~~~~~~~~~i~~~~~~-~~~~~~~~~~l~~g~~~~~~~~  334 (365)
                      +|+||||+|....++.++++++++|+++.+|.......++...++.+++++.++..+ .++++++++++++|.+.+.+.+
T Consensus       201 ~Dvvid~~G~~~~~~~~~~~l~~~G~iv~~G~~~~~~~~~~~~~~~~~~~i~~~~~~~~~~~~~~~~l~~~g~i~~~~~i  280 (308)
T TIGR01202       201 YRAIYDASGDPSLIDTLVRRLAKGGEIVLAGFYTEPVNFDFVPAFMKEARLRIAAEWQPGDLHAVRELIESGALSLDGLI  280 (308)
T ss_pred             CCEEEECCCCHHHHHHHHHhhhcCcEEEEEeecCCCcccccchhhhcceEEEEecccchhHHHHHHHHHHcCCCChhhcc
Confidence            999999999877889999999999999999976544455666777889999987765 5679999999999999877789


Q ss_pred             EEEecCChhhHHHHHHHHhcCCCceEEEEe
Q 017868          335 THRFGFSQKEVEEAFETSARGGTAIKVMFN  364 (365)
Q Consensus       335 ~~~~~~~~~~~~~a~~~~~~~~~~gk~vi~  364 (365)
                      +++|+|  +++.+|++.+.++...+|++|+
T Consensus       281 t~~~~l--~~~~~A~~~~~~~~~~~Kv~~~  308 (308)
T TIGR01202       281 THQRPA--SDAAEAYMTAFSDPDCLKMILD  308 (308)
T ss_pred             ceeecH--HHHHHHHHHHhcCcCceEEEeC
Confidence            999999  9999999988877778999984

>cd08238 sorbose_phosphate_red L-sorbose-1-phosphate reductase

Probab=100.00  E-value=2.1e-43  Score=330.77  Aligned_cols=330  Identities=24%  Similarity=0.374  Sum_probs=264.8

Q ss_pred             cceeEEEecCCceEEEEecCCCCCCCcEEEEEeeeeeCcccHhhh-hccccCC---ccCCCCcccCccceEEEEEeCCCC
Q 017868           17 VNMAAWLLGVNTLKIQPFELPSLGPYDVLVRMKAVGICGSDVHYL-KTLRCAD---FVVKEPMVIGHECAGVIEKVGSEV   92 (365)
Q Consensus        17 ~~~~~~~~~~~~l~~~~~~~p~~~~~eVlI~v~~~~l~~~D~~~~-~g~~~~~---~~~~~p~~~G~e~~G~V~~vG~~v   92 (365)
                      +|+++++.+++.+++.++|.|+++++||+|||.++|+|++|++.+ .|.....   ....+|.++|||++|+|+++|++|
T Consensus         2 ~~~a~~~~~~~~l~~~e~p~P~~~~~eVlVkV~a~gic~sD~~~~~~g~~~~~~~~~~~~~p~i~GhE~~G~V~~vG~~v   81 (410)
T cd08238           2 KTKAWRMYGKGDLRLEKFELPEIADDEILVRVISDSLCFSTWKLALQGSDHKKVPNDLAKEPVILGHEFAGTILKVGKKW   81 (410)
T ss_pred             CcEEEEEEcCCceEEEecCCCCCCCCeEEEEEEEeccCCCCHHHHhcCCccccCcccccCCCceeccccEEEEEEeCCCc
Confidence            588999999999999999999999999999999999999999876 3421111   012468899999999999999999


Q ss_pred             C-CCCCCCEEEEcCCcCCCCCccccCCCCCCCCCccccccCCCCcceeeEEeecCC----ceEECCCCCCcchhccchhh
Q 017868           93 K-TLVPGDRVALEPGISCWRCDHCKGGRYNLCPEMKFFATPPVHGSLANQVVHPAD----LCFKLPDNVSLEEGAMCEPL  167 (365)
Q Consensus        93 ~-~~~~Gd~V~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~v~~~----~~~~iP~~~~~~~a~~~~~~  167 (365)
                      + +|++||||++.+...|+.|.+|..           ++. ..+|+|+||++++++    .++++|+++++++|+.+.++
T Consensus        82 ~~~~~vGdrV~~~~~~~c~~~~~c~~-----------~g~-~~~G~~aey~~v~~~~~~~~~~~lP~~l~~~~aal~epl  149 (410)
T cd08238          82 QGKYKPGQRFVIQPALILPDGPSCPG-----------YSY-TYPGGLATYHIIPNEVMEQDCLLIYEGDGYAEASLVEPL  149 (410)
T ss_pred             cCCCCCCCEEEEcCCcCCCCCCCCCC-----------ccc-cCCCcceEEEEecHHhccCCeEECCCCCCHHHHhhcchH
Confidence            8 599999999998888998887731           111 246999999999987    68999999999999877554


Q ss_pred             HHH---HHHH---------HhcCCCCCCEEEEEcC-CHHHHHHHHHHHHHCC--CCeEEEEeCChhHHHHHHHc------
Q 017868          168 SVG---LHAC---------RRANIGPETNVLIMGA-GPIGLVTMLGAPRAFG--APRIVIVDVDDYRLSVAKEI------  226 (365)
Q Consensus       168 ~~a---~~~~---------~~~~~~~g~~vlI~G~-g~~G~~ai~~l~~~~g--~~~vi~v~~~~~~~~~~~~~------  226 (365)
                      +++   +.++         +.+++++|++|+|+|+ |++|++++| +++.+|  +..|++++++++|.++++++      
T Consensus       150 ~~~~~~~~a~~~~~~~~~~~~~~~~~g~~VlV~G~~G~vG~~aiq-~ak~~G~g~~~Vi~~~~~~~r~~~a~~~~~~~~~  228 (410)
T cd08238         150 SCVIGAYTANYHLQPGEYRHRMGIKPGGNTAILGGAGPMGLMAID-YAIHGPIGPSLLVVTDVNDERLARAQRLFPPEAA  228 (410)
T ss_pred             HHHHHHhhhcccccccchhhhcCCCCCCEEEEEeCCCHHHHHHHH-HHHhcccCCceEEEEcCCHHHHHHHHHhcccccc
Confidence            443   3332         3467899999999975 999999999 888875  45788999999999999997      


Q ss_pred             --CCC-EEEeCCCCcccHHHHHHHHHHHhCCCceEEEeCCCCHHHHHHHHHhcccCCEEEEEccC-CC--CccccchHhh
Q 017868          227 --GAD-NIVKVSTNLQDIAEEVEKIQKAMGTGIDVSFDCAGLNKTMSTALGATCAGGKVCLVGMG-HH--EMTVPLTPAA  300 (365)
Q Consensus       227 --g~~-~~~~~~~~~~~~~~~i~~~~~~~~~~~d~vid~~g~~~~~~~~~~~l~~~G~~~~~g~~-~~--~~~~~~~~~~  300 (365)
                        |++ .++++.. ..++.+.+++++.  +.++|++||++|....+..++++++++|+++.++.. ..  ...++...+.
T Consensus       229 ~~Ga~~~~i~~~~-~~~~~~~v~~~t~--g~g~D~vid~~g~~~~~~~a~~~l~~~G~~v~~~g~~~~~~~~~~~~~~~~  305 (410)
T cd08238         229 SRGIELLYVNPAT-IDDLHATLMELTG--GQGFDDVFVFVPVPELVEEADTLLAPDGCLNFFAGPVDKNFSAPLNFYNVH  305 (410)
T ss_pred             ccCceEEEECCCc-cccHHHHHHHHhC--CCCCCEEEEcCCCHHHHHHHHHHhccCCeEEEEEccCCCCccccccHHHhh
Confidence              665 3444321 2456666666543  668999999999878889999999999988776432 11  2345555678


Q ss_pred             hcCcEEEeeccc-CCcHHHHHHHHHcCCCCCCCceEEEecCChhhHHHHHHHHhcCCCceEEEEeC
Q 017868          301 VREVDVVGVFRY-KNTWPLCLELLRSGKIDVKPLVTHRFGFSQKEVEEAFETSARGGTAIKVMFNL  365 (365)
Q Consensus       301 ~~~~~i~~~~~~-~~~~~~~~~~l~~g~~~~~~~~~~~~~~~~~~~~~a~~~~~~~~~~gk~vi~~  365 (365)
                      .+++++.|++.. ..+++++++++++|++++.+.++++|+|  +++.+|++.+. ++..||+|+.+
T Consensus       306 ~~~~~i~g~~~~~~~~~~~~~~li~~g~i~~~~~it~~~~l--~~~~~A~~~~~-~~~~gKvvl~~  368 (410)
T cd08238         306 YNNTHYVGTSGGNTDDMKEAIDLMAAGKLNPARMVTHIGGL--NAAAETTLNLP-GIPGGKKLIYT  368 (410)
T ss_pred             hcCcEEEEeCCCCHHHHHHHHHHHHcCCCchhhcEEEEecH--HHHHHHHHHhh-ccCCceEEEEC
Confidence            899999998765 5678999999999999877789999999  99999999999 77889999863

L-sorbose-1-phosphate reductase, a member of the MDR family, catalyzes the NADPH-dependent conversion of l-sorbose 1-phosphate to d-glucitol 6-phosphate in the metabolism of L-sorbose to (also converts d-fructose 1-phosphate to d-mannitol 6-phosphate). The medium chain dehydrogenases/reductase (MDR)/zinc-dependent alcohol dehydrogenase-like family, which contains the zinc-dependent alcohol dehydrogenase (ADH-Zn) and related proteins, is a diverse group of proteins related to the first identified member, class I mammalian ADH. MDRs display a broad range of activities and are distinguished from the smaller short chain dehydrogenases (~ 250 amino acids vs. the ~ 350 amino acids of the MDR). The MDR proteins have 2 domains: a C-terminal NAD(P) binding-Rossmann fold domain of an beta-alpha form and an N-terminal catalytic domain with distant homology to GroES. The MDR group contains a host of activities, including the found

>cd08285 NADP_ADH NADP(H)-dependent alcohol dehydrogenases

Probab=100.00  E-value=4.8e-43  Score=322.80  Aligned_cols=338  Identities=29%  Similarity=0.410  Sum_probs=277.9

Q ss_pred             ceeEEEecCCceEEEEecCCCCCCCcEEEEEeeeeeCcccHhhhhccccCCccCCCCcccCccceEEEEEeCCCCCCCCC
Q 017868           18 NMAAWLLGVNTLKIQPFELPSLGPYDVLVRMKAVGICGSDVHYLKTLRCADFVVKEPMVIGHECAGVIEKVGSEVKTLVP   97 (365)
Q Consensus        18 ~~~~~~~~~~~l~~~~~~~p~~~~~eVlI~v~~~~l~~~D~~~~~g~~~~~~~~~~p~~~G~e~~G~V~~vG~~v~~~~~   97 (365)
                      |+++++.+++.+++.+.+.|.+.++||+|||.++++|++|++...+.+..   ...|.++|||++|+|+++|++++++++
T Consensus         1 mka~~~~~~~~~~l~~~~~p~~~~~evlIkv~a~~i~~~d~~~~~g~~~~---~~~~~~~G~e~~G~V~~vG~~v~~~~~   77 (351)
T cd08285           1 MKAFAMLGIGKVGWIEKPIPVCGPNDAIVRPTAVAPCTSDVHTVWGGAPG---ERHGMILGHEAVGVVEEVGSEVKDFKP   77 (351)
T ss_pred             CceEEEccCCccEEEECCCCCCCCCeEEEEEEEEEechhhHHHhcCCCCC---CCCCcccCcceEEEEEEecCCcCccCC
Confidence            68899999888999999999999999999999999999999887764322   355889999999999999999999999


Q ss_pred             CCEEEEcCCcCCCCCccccCCCCCCCCCcc--ccccCCCCcceeeEEeecCC--ceEECCCCCCcchhccch-hhHHHHH
Q 017868           98 GDRVALEPGISCWRCDHCKGGRYNLCPEMK--FFATPPVHGSLANQVVHPAD--LCFKLPDNVSLEEGAMCE-PLSVGLH  172 (365)
Q Consensus        98 Gd~V~~~~~~~~~~~~~~~~~~~~~~~~~~--~~~~~~~~g~~~~~~~v~~~--~~~~iP~~~~~~~a~~~~-~~~~a~~  172 (365)
                      ||+|++.+..+|++|.+|..++.++|.+..  +.......|+|+||+.++..  .++++|+++++++++.++ ++.+|++
T Consensus        78 Gd~V~~~~~~~~~~c~~c~~g~~~~~~~~~~~~~~~~~~~g~~~~y~~v~~~~~~~~~lP~~~~~~~aa~~~~~~~ta~~  157 (351)
T cd08285          78 GDRVIVPAITPDWRSVAAQRGYPSQSGGMLGGWKFSNFKDGVFAEYFHVNDADANLAPLPDGLTDEQAVMLPDMMSTGFH  157 (351)
T ss_pred             CCEEEEcCcCCCCCCHHHHCcCcccCcCCCCCccccCCCCcceeEEEEcchhhCceEECCCCCCHHHhhhhccchhhHHH
Confidence            999999888899999999999999998642  11112346999999999974  899999999999988875 7889999


Q ss_pred             HHHhcCCCCCCEEEEEcCCHHHHHHHHHHHHHCCCCeEEEEeCChhHHHHHHHcCCCEEEeCCCCcccHHHHHHHHHHHh
Q 017868          173 ACRRANIGPETNVLIMGAGPIGLVTMLGAPRAFGAPRIVIVDVDDYRLSVAKEIGADNIVKVSTNLQDIAEEVEKIQKAM  252 (365)
Q Consensus       173 ~~~~~~~~~g~~vlI~G~g~~G~~ai~~l~~~~g~~~vi~v~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~i~~~~~~~  252 (365)
                      +++.+++++|++|||+|+|++|++++| +++..|++.++++++++++.++++++|++.++++..  .++.+.+....  .
T Consensus       158 ~~~~~~~~~g~~vlI~g~g~iG~~~~~-lak~~G~~~v~~~~~~~~~~~~~~~~g~~~~v~~~~--~~~~~~i~~~~--~  232 (351)
T cd08285         158 GAELANIKLGDTVAVFGIGPVGLMAVA-GARLRGAGRIIAVGSRPNRVELAKEYGATDIVDYKN--GDVVEQILKLT--G  232 (351)
T ss_pred             HHHccCCCCCCEEEEECCCHHHHHHHH-HHHHcCCCeEEEEeCCHHHHHHHHHcCCceEecCCC--CCHHHHHHHHh--C
Confidence            987788999999999988999999999 999999987899999999999999999988877543  46666666553  2


Q ss_pred             CCCceEEEeCCCCHHHHHHHHHhcccCCEEEEEccCCCCc--cccchH--hhhcCcEEEeeccc--CCcHHHHHHHHHcC
Q 017868          253 GTGIDVSFDCAGLNKTMSTALGATCAGGKVCLVGMGHHEM--TVPLTP--AAVREVDVVGVFRY--KNTWPLCLELLRSG  326 (365)
Q Consensus       253 ~~~~d~vid~~g~~~~~~~~~~~l~~~G~~~~~g~~~~~~--~~~~~~--~~~~~~~i~~~~~~--~~~~~~~~~~l~~g  326 (365)
                      +.++|+++|++|....+..++++++++|+++.+|......  ..+...  ...+..++.+.+..  .++++++++++++|
T Consensus       233 ~~~~d~vld~~g~~~~~~~~~~~l~~~G~~v~~g~~~~~~~~~~~~~~~~~~~~~~~i~~~~~~~~~~~~~~~~~~~~~g  312 (351)
T cd08285         233 GKGVDAVIIAGGGQDTFEQALKVLKPGGTISNVNYYGEDDYLPIPREEWGVGMGHKTINGGLCPGGRLRMERLASLIEYG  312 (351)
T ss_pred             CCCCcEEEECCCCHHHHHHHHHHhhcCCEEEEecccCCCceeecChhhhhhhccccEEEEeecCCccccHHHHHHHHHcC
Confidence            5689999999998778899999999999999998654321  222111  23455566655432  56899999999999


Q ss_pred             CCCCCC-ceEEEecCChhhHHHHHHHHhcCC-CceEEEEeC
Q 017868          327 KIDVKP-LVTHRFGFSQKEVEEAFETSARGG-TAIKVMFNL  365 (365)
Q Consensus       327 ~~~~~~-~~~~~~~~~~~~~~~a~~~~~~~~-~~gk~vi~~  365 (365)
                      ++.+.. ...+.|++  +++.+|++.+.+++ ..+|++|.+
T Consensus       313 ~i~~~~~~~~~~~~l--~~~~~a~~~~~~~~~~~~k~~~~~  351 (351)
T cd08285         313 RVDPSKLLTHHFFGF--DDIEEALMLMKDKPDDLIKPVIIF  351 (351)
T ss_pred             CCChhhceeccccCH--HHHHHHHHHHhcccCCeEEEEEeC
Confidence            996522 34456778  99999999998886 479999875

This group is predominated by atypical alcohol dehydrogenases; they exist as tetramers and exhibit specificity for NADP(H) as a cofactor in the interconversion of alcohols and aldehydes, or ketones. Like other zinc-dependent alcohol dehydrogenases (ADH) of the medium chain alcohol dehydrogenase/reductase family (MDR), tetrameric ADHs have a catalytic zinc that resides between the catalytic and NAD(H)binding domains; however, they do not have and a structural zinc in a lobe of the catalytic domain. The medium chain alcohol dehydrogenase family (MDR) has a NAD(P)(H)-binding domain in a Rossmann fold of a beta-alpha form. The N-terminal region typically has an all-beta catalytic domain. These proteins typically form dimers (typically higher plants, mammals) or tetramers (yeast, bacteria), and have 2 tightly bound zinc atoms per subunit.

>cd08256 Zn_ADH2 Alcohol dehydrogenases of the MDR family

Probab=100.00  E-value=1.5e-42  Score=319.43  Aligned_cols=339  Identities=30%  Similarity=0.568  Sum_probs=281.2

Q ss_pred             ceeEEEecCCceEEEEecCCCCCCCcEEEEEeeeeeCcccHhhhhccccC--C----ccCCCCcccCccceEEEEEeCCC
Q 017868           18 NMAAWLLGVNTLKIQPFELPSLGPYDVLVRMKAVGICGSDVHYLKTLRCA--D----FVVKEPMVIGHECAGVIEKVGSE   91 (365)
Q Consensus        18 ~~~~~~~~~~~l~~~~~~~p~~~~~eVlI~v~~~~l~~~D~~~~~g~~~~--~----~~~~~p~~~G~e~~G~V~~vG~~   91 (365)
                      ||++++++++.+++.+++.|++.++||+||+.++++|+.|+....|....  .    ....+|.++|+|++|+|+++|++
T Consensus         1 mka~~~~~~~~~~~~~~~~p~~~~~~v~V~v~a~~i~~~d~~~~~g~~~~~~~~~~~~~~~~p~~~g~e~~G~v~~vG~~   80 (350)
T cd08256           1 MRAVVCHGPQDYRLEEVPVPRPGPGEILVKVEACGICAGDIKCYHGAPSFWGDENQPPYVKPPMIPGHEFVGRVVELGEG   80 (350)
T ss_pred             CeeEEEecCCceEEEECCCCCCCCCeEEEEEEEEEEcccchhhhcCCCccccccccCccCCCCcccCcceeEEEEEeCCC
Confidence            57899998889999999999999999999999999999999888764210  0    00145778999999999999999


Q ss_pred             CC--CCCCCCEEEEcCCcCCCCCccccCCCCCCCCCcccccc-CCCCcceeeEEeecCC-ceEECCCCCCcchhccchhh
Q 017868           92 VK--TLVPGDRVALEPGISCWRCDHCKGGRYNLCPEMKFFAT-PPVHGSLANQVVHPAD-LCFKLPDNVSLEEGAMCEPL  167 (365)
Q Consensus        92 v~--~~~~Gd~V~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~~~~g~~~~~~~v~~~-~~~~iP~~~~~~~a~~~~~~  167 (365)
                      ++  +|++||+|++.+..+|+.|++|..+.+++|....+++. ....|+|++|+.++++ .++++|+++++++++.+.++
T Consensus        81 v~~~~~~~Gd~V~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~g~~~~~~~~~~~~~~~~lP~~~~~~~aa~~~~~  160 (350)
T cd08256          81 AEERGVKVGDRVISEQIVPCWNCRFCNRGQYWMCQKHDLYGFQNNVNGGMAEYMRFPKEAIVHKVPDDIPPEDAILIEPL  160 (350)
T ss_pred             cccCCCCCCCEEEECCcCCCCCChHHhCcCcccCcCccceeeccCCCCcceeeEEcccccceEECCCCCCHHHHhhhhHH
Confidence            99  89999999999999999999999999999987654443 1246999999999987 67899999999888877788


Q ss_pred             HHHHHHHHhcCCCCCCEEEEEcCCHHHHHHHHHHHHHCCCCeEEEEeCChhHHHHHHHcCCCEEEeCCCCcccHHHHHHH
Q 017868          168 SVGLHACRRANIGPETNVLIMGAGPIGLVTMLGAPRAFGAPRIVIVDVDDYRLSVAKEIGADNIVKVSTNLQDIAEEVEK  247 (365)
Q Consensus       168 ~~a~~~~~~~~~~~g~~vlI~G~g~~G~~ai~~l~~~~g~~~vi~v~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~i~~  247 (365)
                      .++|++++.+++++|++|||.|+|.+|+++++ +++.+|+.+++++++++++.++++++|++.+++..  ..++.+.+.+
T Consensus       161 ~ta~~a~~~~~~~~g~~vlI~g~g~vG~~~~~-~a~~~G~~~v~~~~~~~~~~~~~~~~g~~~v~~~~--~~~~~~~~~~  237 (350)
T cd08256         161 ACALHAVDRANIKFDDVVVLAGAGPLGLGMIG-AARLKNPKKLIVLDLKDERLALARKFGADVVLNPP--EVDVVEKIKE  237 (350)
T ss_pred             HHHHHHHHhcCCCCCCEEEEECCCHHHHHHHH-HHHHcCCcEEEEEcCCHHHHHHHHHcCCcEEecCC--CcCHHHHHHH
Confidence            89999887788999999999777999999999 99999998888999999999999999998776643  3566666665


Q ss_pred             HHHHhCCCceEEEeCCCCHHHHHHHHHhcccCCEEEEEccCCCCccccchHh-hhcCcEEEeecccCCcHHHHHHHHHcC
Q 017868          248 IQKAMGTGIDVSFDCAGLNKTMSTALGATCAGGKVCLVGMGHHEMTVPLTPA-AVREVDVVGVFRYKNTWPLCLELLRSG  326 (365)
Q Consensus       248 ~~~~~~~~~d~vid~~g~~~~~~~~~~~l~~~G~~~~~g~~~~~~~~~~~~~-~~~~~~i~~~~~~~~~~~~~~~~l~~g  326 (365)
                      +.  .+.++|++||++|....+..++++++++|+++.+|............+ ..+++++.++......+.+++++++++
T Consensus       238 ~~--~~~~vdvvld~~g~~~~~~~~~~~l~~~G~~v~~g~~~~~~~~~~~~~~~~~~~~i~~~~~~~~~~~~~~~~~~~g  315 (350)
T cd08256         238 LT--GGYGCDIYIEATGHPSAVEQGLNMIRKLGRFVEFSVFGDPVTVDWSIIGDRKELDVLGSHLGPYCYPIAIDLIASG  315 (350)
T ss_pred             Hh--CCCCCCEEEECCCChHHHHHHHHHhhcCCEEEEEccCCCCCccChhHhhcccccEEEEeccCchhHHHHHHHHHcC
Confidence            53  256899999999976678889999999999999975433333333322 356777777766666789999999999


Q ss_pred             CCCCCCceEEEecCChhhHHHHHHHHhcCCCceEEEE
Q 017868          327 KIDVKPLVTHRFGFSQKEVEEAFETSARGGTAIKVMF  363 (365)
Q Consensus       327 ~~~~~~~~~~~~~~~~~~~~~a~~~~~~~~~~gk~vi  363 (365)
                      .+.+.+.+.+.|++  +++.+|++.++++...+|+++
T Consensus       316 ~l~~~~~~~~~~~l--~~~~~a~~~~~~~~~~~kvv~  350 (350)
T cd08256         316 RLPTDGIVTHQFPL--EDFEEAFELMARGDDSIKVVL  350 (350)
T ss_pred             CCChhHheEEEeEH--HHHHHHHHHHHhCCCceEEeC
Confidence            99544446788888  999999999999988899875

This group has the characteristic catalytic and structural zinc-binding sites of the zinc-dependent alcohol dehydrogenases of the MDR family. The medium chain dehydrogenases/reductase (MDR)/zinc-dependent alcohol dehydrogenase-like family, which contains the zinc-dependent alcohol dehydrogenase (ADH-Zn) and related proteins, is a diverse group of proteins related to the first identified member, class I mammalian ADH. MDRs display a broad range of activities and are distinguished from the smaller short chain dehydrogenases (~ 250 amino acids vs. the ~ 350 amino acids of the MDR). The MDR proteins have 2 domains: a C-terminal NAD(P)-binding Rossmann fold domain of a beta-alpha form and an N-terminal catalytic domain with distant homology to GroES. The MDR group contains a host of activities, including the founding alcohol dehydrogenase (ADH), quinone reductase, sorbitol dehydrogenase, formaldehyde dehydrogenase, butanediol DH,

>cd05285 sorbitol_DH Sorbitol dehydrogenase

Probab=100.00  E-value=1.8e-42  Score=318.07  Aligned_cols=338  Identities=57%  Similarity=0.981  Sum_probs=281.3

Q ss_pred             eEEEecCCceEEEEecCCCCCCCcEEEEEeeeeeCcccHhhhhccccCCccCCCCcccCccceEEEEEeCCCCCCCCCCC
Q 017868           20 AAWLLGVNTLKIQPFELPSLGPYDVLVRMKAVGICGSDVHYLKTLRCADFVVKEPMVIGHECAGVIEKVGSEVKTLVPGD   99 (365)
Q Consensus        20 ~~~~~~~~~l~~~~~~~p~~~~~eVlI~v~~~~l~~~D~~~~~g~~~~~~~~~~p~~~G~e~~G~V~~vG~~v~~~~~Gd   99 (365)
                      +.++.+++.+++++.+.|.+.++||+|||.++++|+.|+....+...+......|.++|+|++|+|+++|+++++|++||
T Consensus         1 ~~~~~~~~~~~~~~~~~~~l~~~~vlV~v~~~~l~~~d~~~~~~~~~~~~~~~~~~~~g~e~~G~V~~vG~~v~~~~~Gd   80 (343)
T cd05285           1 AAVLHGPGDLRLEERPIPEPGPGEVLVRVRAVGICGSDVHYYKHGRIGDFVVKEPMVLGHESAGTVVAVGSGVTHLKVGD   80 (343)
T ss_pred             CceEecCCceeEEECCCCCCCCCeEEEEEEEeeEccccHHHHccCCCcccCCCCCcccCcceeEEEEeeCCCCCCCCCCC
Confidence            35788889999999999999999999999999999999987643222222224577899999999999999999999999


Q ss_pred             EEEEcCCcCCCCCccccCCCCCCCCCccccccCCCCcceeeEEeecCCceEECCCCCCcchhccchhhHHHHHHHHhcCC
Q 017868          100 RVALEPGISCWRCDHCKGGRYNLCPEMKFFATPPVHGSLANQVVHPADLCFKLPDNVSLEEGAMCEPLSVGLHACRRANI  179 (365)
Q Consensus       100 ~V~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~v~~~~~~~iP~~~~~~~a~~~~~~~~a~~~~~~~~~  179 (365)
                      +|++.+..+|++|++|..+..++|++...++.....|+|++|+.++++.++++|+++++++++.+.++.+|+++++.+++
T Consensus        81 ~V~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~v~~~~~~~lP~~~~~~~aa~~~~~~~a~~~~~~~~~  160 (343)
T cd05285          81 RVAIEPGVPCRTCEFCKSGRYNLCPDMRFAATPPVDGTLCRYVNHPADFCHKLPDNVSLEEGALVEPLSVGVHACRRAGV  160 (343)
T ss_pred             EEEEccccCCCCChhHhCcCcccCcCccccccccCCCceeeeEEecHHHcEECcCCCCHHHhhhhhHHHHHHHHHHhcCC
Confidence            99999999999999999999999987644343335799999999999999999999999998877778889988888899


Q ss_pred             CCCCEEEEEcCCHHHHHHHHHHHHHCCCCeEEEEeCChhHHHHHHHcCCCEEEeCCCCccc---HHHHHHHHHHHhCCCc
Q 017868          180 GPETNVLIMGAGPIGLVTMLGAPRAFGAPRIVIVDVDDYRLSVAKEIGADNIVKVSTNLQD---IAEEVEKIQKAMGTGI  256 (365)
Q Consensus       180 ~~g~~vlI~G~g~~G~~ai~~l~~~~g~~~vi~v~~~~~~~~~~~~~g~~~~~~~~~~~~~---~~~~i~~~~~~~~~~~  256 (365)
                      ++|+++||+|+|.+|+++++ +++.+|++.++++.+++++.++++++|++.+++++.  .+   +.+.+.+..  .+.++
T Consensus       161 ~~g~~vlI~g~g~vG~~a~~-lak~~G~~~v~~~~~~~~~~~~~~~~g~~~vi~~~~--~~~~~~~~~~~~~~--~~~~~  235 (343)
T cd05285         161 RPGDTVLVFGAGPIGLLTAA-VAKAFGATKVVVTDIDPSRLEFAKELGATHTVNVRT--EDTPESAEKIAELL--GGKGP  235 (343)
T ss_pred             CCCCEEEEECCCHHHHHHHH-HHHHcCCcEEEEECCCHHHHHHHHHcCCcEEecccc--ccchhHHHHHHHHh--CCCCC
Confidence            99999999988999999999 999999976888888899999999999998877543  33   355565543  25679


Q ss_pred             eEEEeCCCCHHHHHHHHHhcccCCEEEEEccCCCCccccchHhhhcCcEEEeecccCCcHHHHHHHHHcCCCCCCCceEE
Q 017868          257 DVSFDCAGLNKTMSTALGATCAGGKVCLVGMGHHEMTVPLTPAAVREVDVVGVFRYKNTWPLCLELLRSGKIDVKPLVTH  336 (365)
Q Consensus       257 d~vid~~g~~~~~~~~~~~l~~~G~~~~~g~~~~~~~~~~~~~~~~~~~i~~~~~~~~~~~~~~~~l~~g~~~~~~~~~~  336 (365)
                      |++|||.|....+...+++++++|+++.+|........+.....++++++.+.....+.+++++++++++.+.+.+...+
T Consensus       236 d~vld~~g~~~~~~~~~~~l~~~G~~v~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~l~~~~~~~~  315 (343)
T cd05285         236 DVVIECTGAESCIQTAIYATRPGGTVVLVGMGKPEVTLPLSAASLREIDIRGVFRYANTYPTAIELLASGKVDVKPLITH  315 (343)
T ss_pred             CEEEECCCCHHHHHHHHHHhhcCCEEEEEccCCCCCccCHHHHhhCCcEEEEeccChHHHHHHHHHHHcCCCCchHhEEE
Confidence            99999999766788999999999999999854433333444677888888887766778899999999998754455678


Q ss_pred             EecCChhhHHHHHHHHhcCC-CceEEEEe
Q 017868          337 RFGFSQKEVEEAFETSARGG-TAIKVMFN  364 (365)
Q Consensus       337 ~~~~~~~~~~~a~~~~~~~~-~~gk~vi~  364 (365)
                      +|++  +++.+|++.+.++. ..+|++|.
T Consensus       316 ~~~l--~~~~~a~~~~~~~~~~~~k~~~~  342 (343)
T cd05285         316 RFPL--EDAVEAFETAAKGKKGVIKVVIE  342 (343)
T ss_pred             EEeH--HHHHHHHHHHHcCCCCeeEEEEe
Confidence            8888  99999999998874 56999974

Sorbitol and aldose reductase are NAD(+) binding proteins of the polyol pathway, which interconverts glucose and fructose. Sorbitol dehydrogenase is tetrameric and has a single catalytic zinc per subunit. Aldose reductase catalyzes the NADP(H)-dependent conversion of glucose to sorbital, and SDH uses NAD(H) in the conversion of sorbitol to fructose. NAD(P)(H)-dependent oxidoreductases are the major enzymes in the interconversion of alcohols and aldehydes, or ketones. The medium chain alcohol dehydrogenase family (MDR) have a NAD(P)(H)-binding domain in a Rossmann fold of a beta-alpha form. The N-terminal region typically has an all-beta catalytic domain. These proteins typically form dimers (typically higher plants, mammals) or tetramers (yeast, bacteria), and have 2 tightly bound zinc atoms per subunit.

>cd08299 alcohol_DH_class_I_II_IV class I, II, IV alcohol dehydrogenases

Probab=100.00  E-value=3.7e-42  Score=318.56  Aligned_cols=339  Identities=26%  Similarity=0.412  Sum_probs=274.8

Q ss_pred             hcceeEEEecC-CceEEEEecCCCCCCCcEEEEEeeeeeCcccHhhhhccccCCccCCCCcccCccceEEEEEeCCCCCC
Q 017868           16 EVNMAAWLLGV-NTLKIQPFELPSLGPYDVLVRMKAVGICGSDVHYLKTLRCADFVVKEPMVIGHECAGVIEKVGSEVKT   94 (365)
Q Consensus        16 ~~~~~~~~~~~-~~l~~~~~~~p~~~~~eVlI~v~~~~l~~~D~~~~~g~~~~~~~~~~p~~~G~e~~G~V~~vG~~v~~   94 (365)
                      .+++++|+..+ +.++++++|.|.+.++||+|||.++++|++|++...|..    ...+|.++|||++|+|+++|++++.
T Consensus         6 ~~~~a~~~~~~~~~~~l~~~p~p~~~~~~vlvkv~~~gi~~~D~~~~~g~~----~~~~p~v~G~e~~G~V~~vG~~v~~   81 (373)
T cd08299           6 IKCKAAVLWEPKKPFSIEEIEVAPPKAHEVRIKIVATGICRSDDHVVSGKL----VTPFPVILGHEAAGIVESVGEGVTT   81 (373)
T ss_pred             ceeEEEEEecCCCCcEEEEeecCCCCCCEEEEEEEEEEcCcccHHHhcCCC----CCCCCccccccceEEEEEeCCCCcc
Confidence            45888888864 579999999999999999999999999999999987753    2356889999999999999999999


Q ss_pred             CCCCCEEEEcCCcCCCCCccccCCCCCCCCCcccccc--------------------CCCCcceeeEEeecCCceEECCC
Q 017868           95 LVPGDRVALEPGISCWRCDHCKGGRYNLCPEMKFFAT--------------------PPVHGSLANQVVHPADLCFKLPD  154 (365)
Q Consensus        95 ~~~Gd~V~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~--------------------~~~~g~~~~~~~v~~~~~~~iP~  154 (365)
                      +++||+|++.+..+|++|.+|+.++++.|+.....+.                    ....|+|+||+++++++++++|+
T Consensus        82 ~~~Gd~V~~~~~~~c~~c~~c~~~~~~~c~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~G~~~e~~~v~~~~~~~lP~  161 (373)
T cd08299          82 VKPGDKVIPLFVPQCGKCRACLNPESNLCLKNDLGKPQGLMQDGTSRFTCKGKPIHHFLGTSTFSEYTVVDEIAVAKIDA  161 (373)
T ss_pred             CCCCCEEEECCCCCCCCChhhhCCCcccCcCcccccccccccCCccccccCCcccccccCCCcccceEEecccceeeCCC
Confidence            9999999999999999999999999999987543210                    00258999999999999999999


Q ss_pred             CCCcchhccch-hhHHHHHHH-HhcCCCCCCEEEEEcCCHHHHHHHHHHHHHCCCCeEEEEeCChhHHHHHHHcCCCEEE
Q 017868          155 NVSLEEGAMCE-PLSVGLHAC-RRANIGPETNVLIMGAGPIGLVTMLGAPRAFGAPRIVIVDVDDYRLSVAKEIGADNIV  232 (365)
Q Consensus       155 ~~~~~~a~~~~-~~~~a~~~~-~~~~~~~g~~vlI~G~g~~G~~ai~~l~~~~g~~~vi~v~~~~~~~~~~~~~g~~~~~  232 (365)
                      ++++++++.++ ++.+||+++ +.+++++|++|||+|+|++|+++++ +++..|+..|+++++++++.+.++++|++.++
T Consensus       162 ~l~~~~aa~~~~~~~ta~~~~~~~~~~~~g~~VlV~G~g~vG~~~~~-~a~~~G~~~Vi~~~~~~~~~~~a~~lGa~~~i  240 (373)
T cd08299         162 AAPLEKVCLIGCGFSTGYGAAVNTAKVTPGSTCAVFGLGGVGLSAIM-GCKAAGASRIIAVDINKDKFAKAKELGATECI  240 (373)
T ss_pred             CCChHHhheeccchHHHHHHHHhccCCCCCCEEEEECCCHHHHHHHH-HHHHcCCCeEEEEcCCHHHHHHHHHcCCceEe
Confidence            99999999886 788999886 5688999999999988999999999 99999996688888999999999999998888


Q ss_pred             eCCCCcccHHHHHHHHHHHhCCCceEEEeCCCCHHHHHHHHHhc-ccCCEEEEEccCCCCccccchH-hhhcCcEEEeec
Q 017868          233 KVSTNLQDIAEEVEKIQKAMGTGIDVSFDCAGLNKTMSTALGAT-CAGGKVCLVGMGHHEMTVPLTP-AAVREVDVVGVF  310 (365)
Q Consensus       233 ~~~~~~~~~~~~i~~~~~~~~~~~d~vid~~g~~~~~~~~~~~l-~~~G~~~~~g~~~~~~~~~~~~-~~~~~~~i~~~~  310 (365)
                      +..+.++++...++++.   ++++|+++|++|.+..+..++..+ +++|+++.+|............ ...++.++.+.+
T Consensus       241 ~~~~~~~~~~~~v~~~~---~~~~d~vld~~g~~~~~~~~~~~~~~~~G~~v~~g~~~~~~~~~~~~~~~~~~~~i~~~~  317 (373)
T cd08299         241 NPQDYKKPIQEVLTEMT---DGGVDFSFEVIGRLDTMKAALASCHEGYGVSVIVGVPPSSQNLSINPMLLLTGRTWKGAV  317 (373)
T ss_pred             cccccchhHHHHHHHHh---CCCCeEEEECCCCcHHHHHHHHhhccCCCEEEEEccCCCCceeecCHHHHhcCCeEEEEE
Confidence            75443334555565553   358999999999766777766654 5789999998653322222222 234667777765


Q ss_pred             cc----CCcHHHHHHHHHcCCCCCCCceEEEecCChhhHHHHHHHHhcCCCceEEEEeC
Q 017868          311 RY----KNTWPLCLELLRSGKIDVKPLVTHRFGFSQKEVEEAFETSARGGTAIKVMFNL  365 (365)
Q Consensus       311 ~~----~~~~~~~~~~l~~g~~~~~~~~~~~~~~~~~~~~~a~~~~~~~~~~gk~vi~~  365 (365)
                      ..    ...+.++++.+.++.+.+.+.++++|++  +++.+|++.+.+++ ..|+++++
T Consensus       318 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l--~e~~~a~~~~~~~~-~~k~~~~~  373 (373)
T cd08299         318 FGGWKSKDSVPKLVADYMAKKFNLDPLITHTLPF--EKINEGFDLLRSGK-SIRTVLTF  373 (373)
T ss_pred             ecCCccHHHHHHHHHHHHcCCCCchhheeeeecH--HHHHHHHHHHhCCC-cceEEEeC
Confidence            43    2466778888888877666778899998  99999999988765 46888864

NAD(P)(H)-dependent oxidoreductases are the major enzymes in the interconversion of alcohols and aldehydes or ketones. This group includes alcohol dehydrogenases corresponding to mammalian classes I, II, IV. Alcohol dehydrogenase in the liver converts ethanol and NAD+ to acetaldehyde and NADH, while in yeast and some other microorganisms ADH catalyzes the conversion acetaldehyde to ethanol in alcoholic fermentation. ADH is a member of the medium chain alcohol dehydrogenase family (MDR), which have a NAD(P)(H)-binding domain in a Rossmann fold of a beta-alpha form. The NAD(H)-binding region is comprised of 2 structurally similar halves, each of which contacts a mononucleotide. A GxGxxG motif after the first mononucleotide contact half allows the close contact of the coenzyme with the ADH backbone. The N-terminal catalytic domain has a distant homology to GroES. These proteins typically form dimers (typically

>cd08296 CAD_like Cinnamyl alcohol dehydrogenases (CAD)

Probab=100.00  E-value=3.3e-42  Score=314.88  Aligned_cols=329  Identities=23%  Similarity=0.387  Sum_probs=278.4

Q ss_pred             ceeEEEecC-CceEEEEecCCCCCCCcEEEEEeeeeeCcccHhhhhccccCCccCCCCcccCccceEEEEEeCCCCCCCC
Q 017868           18 NMAAWLLGV-NTLKIQPFELPSLGPYDVLVRMKAVGICGSDVHYLKTLRCADFVVKEPMVIGHECAGVIEKVGSEVKTLV   96 (365)
Q Consensus        18 ~~~~~~~~~-~~l~~~~~~~p~~~~~eVlI~v~~~~l~~~D~~~~~g~~~~~~~~~~p~~~G~e~~G~V~~vG~~v~~~~   96 (365)
                      |+++++.++ +.+++.++|.|++.++||+|||.++++|+.|+....|....   ..+|.++|||++|+|+++|+++++|+
T Consensus         1 m~a~~~~~~~~~~~~~~~~~p~~~~~~v~v~v~~~~i~~~d~~~~~g~~~~---~~~p~~~g~e~~G~v~~vG~~v~~~~   77 (333)
T cd08296           1 YKAVQVTEPGGPLELVERDVPLPGPGEVLIKVEACGVCHSDAFVKEGAMPG---LSYPRVPGHEVVGRIDAVGEGVSRWK   77 (333)
T ss_pred             CeEEEEccCCCCceEEeccCCCCCCCEEEEEEEEEecchHHHHHHhCCCCC---CCCCcccCcceeEEEEEECCCCccCC
Confidence            688999887 68999999999999999999999999999999988764321   34578999999999999999999999


Q ss_pred             CCCEEEEcC-CcCCCCCccccCCCCCCCCCccccccCCCCcceeeEEeecCCceEECCCCCCcchhccch-hhHHHHHHH
Q 017868           97 PGDRVALEP-GISCWRCDHCKGGRYNLCPEMKFFATPPVHGSLANQVVHPADLCFKLPDNVSLEEGAMCE-PLSVGLHAC  174 (365)
Q Consensus        97 ~Gd~V~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~v~~~~~~~iP~~~~~~~a~~~~-~~~~a~~~~  174 (365)
                      +||+|++.+ ...|++|.+|..++++.|......+. ...|++++|+.++.+.++++|+++++++++.++ .+.+|++++
T Consensus        78 ~Gd~V~~~~~~~~~~~~~~~~~g~~~~c~~~~~~~~-~~~g~~a~~~~v~~~~~~~lp~~~~~~~aa~l~~~~~ta~~~~  156 (333)
T cd08296          78 VGDRVGVGWHGGHCGTCDACRRGDFVHCENGKVTGV-TRDGGYAEYMLAPAEALARIPDDLDAAEAAPLLCAGVTTFNAL  156 (333)
T ss_pred             CCCEEEeccccCCCCCChhhhCcCcccCCCCCccCc-ccCCcceeEEEEchhheEeCCCCCCHHHhhhhhhhhHHHHHHH
Confidence            999998743 56799999999999999998765543 246999999999999999999999999888775 778899988


Q ss_pred             HhcCCCCCCEEEEEcCCHHHHHHHHHHHHHCCCCeEEEEeCChhHHHHHHHcCCCEEEeCCCCcccHHHHHHHHHHHhCC
Q 017868          175 RRANIGPETNVLIMGAGPIGLVTMLGAPRAFGAPRIVIVDVDDYRLSVAKEIGADNIVKVSTNLQDIAEEVEKIQKAMGT  254 (365)
Q Consensus       175 ~~~~~~~g~~vlI~G~g~~G~~ai~~l~~~~g~~~vi~v~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~i~~~~~~~~~  254 (365)
                      +..++.++++|||+|+|.+|+++++ +++.+|+ .++++++++++.++++++|++.++++.+  .++.+.+++.     .
T Consensus       157 ~~~~~~~~~~vlV~g~g~iG~~~~~-~a~~~G~-~vi~~~~~~~~~~~~~~~g~~~~i~~~~--~~~~~~~~~~-----~  227 (333)
T cd08296         157 RNSGAKPGDLVAVQGIGGLGHLAVQ-YAAKMGF-RTVAISRGSDKADLARKLGAHHYIDTSK--EDVAEALQEL-----G  227 (333)
T ss_pred             HhcCCCCCCEEEEECCcHHHHHHHH-HHHHCCC-eEEEEeCChHHHHHHHHcCCcEEecCCC--ccHHHHHHhc-----C
Confidence            7678999999999999999999999 9999999 5788888899999999999988776533  4555555443     4


Q ss_pred             CceEEEeCCCCHHHHHHHHHhcccCCEEEEEccCCCCccccchHhhhcCcEEEeeccc-CCcHHHHHHHHHcCCCCCCCc
Q 017868          255 GIDVSFDCAGLNKTMSTALGATCAGGKVCLVGMGHHEMTVPLTPAAVREVDVVGVFRY-KNTWPLCLELLRSGKIDVKPL  333 (365)
Q Consensus       255 ~~d~vid~~g~~~~~~~~~~~l~~~G~~~~~g~~~~~~~~~~~~~~~~~~~i~~~~~~-~~~~~~~~~~l~~g~~~~~~~  333 (365)
                      ++|+++|+.|....+...+++++++|+++.+|.......++...++.+++++.++... ...+.+++++++++.+  .+.
T Consensus       228 ~~d~vi~~~g~~~~~~~~~~~l~~~G~~v~~g~~~~~~~~~~~~~~~~~~~i~~~~~~~~~~~~~~~~~~~~~~l--~~~  305 (333)
T cd08296         228 GAKLILATAPNAKAISALVGGLAPRGKLLILGAAGEPVAVSPLQLIMGRKSIHGWPSGTALDSEDTLKFSALHGV--RPM  305 (333)
T ss_pred             CCCEEEECCCchHHHHHHHHHcccCCEEEEEecCCCCCCcCHHHHhhcccEEEEeCcCCHHHHHHHHHHHHhCCC--Cce
Confidence            7999999987667888999999999999999865544455555567899999998754 5678889999988887  444


Q ss_pred             eEEEecCChhhHHHHHHHHhcCCCceEEEEe
Q 017868          334 VTHRFGFSQKEVEEAFETSARGGTAIKVMFN  364 (365)
Q Consensus       334 ~~~~~~~~~~~~~~a~~~~~~~~~~gk~vi~  364 (365)
                      + +.|++  +++.+|++.+++++.+||+|++
T Consensus       306 v-~~~~~--~~~~~a~~~~~~~~~~gk~v~~  333 (333)
T cd08296         306 V-ETFPL--EKANEAYDRMMSGKARFRVVLT  333 (333)
T ss_pred             E-EEEEH--HHHHHHHHHHHCCCCceeEEeC
Confidence            4 57888  9999999999999999999875

Cinnamyl alcohol dehydrogenases (CAD), members of the medium chain dehydrogenase/reductase family, reduce cinnamaldehydes to cinnamyl alcohols in the last step of monolignal metabolism in plant cells walls. CAD binds 2 zinc ions and is NADPH- dependent. CAD family members are also found in non-plant species, e.g. in yeast where they have an aldehyde reductase activity. The medium chain dehydrogenases/reductase (MDR)/zinc-dependent alcohol dehydrogenase-like family, which contains the zinc-dependent alcohol dehydrogenase (ADH-Zn) and related proteins, is a diverse group of proteins related to the first identified member, class I mammalian ADH. MDRs display a broad range of activities and are distinguished from the smaller short chain dehydrogenases (~ 250 amino acids vs. the ~ 350 amino acids of the MDR). The MDR proteins have 2 domains: a C-terminal NAD(P) binding-Rossmann fold domain of a beta-alpha form and an N-terminal catal

>cd08283 FDH_like_1 Glutathione-dependent formaldehyde dehydrogenase related proteins, child 1

Probab=100.00  E-value=5.1e-42  Score=319.20  Aligned_cols=339  Identities=29%  Similarity=0.477  Sum_probs=278.9

Q ss_pred             ceeEEEecCCceEEEEecCCCC-CCCcEEEEEeeeeeCcccHhhhhccccCCccCCCCcccCccceEEEEEeCCCCCCCC
Q 017868           18 NMAAWLLGVNTLKIQPFELPSL-GPYDVLVRMKAVGICGSDVHYLKTLRCADFVVKEPMVIGHECAGVIEKVGSEVKTLV   96 (365)
Q Consensus        18 ~~~~~~~~~~~l~~~~~~~p~~-~~~eVlI~v~~~~l~~~D~~~~~g~~~~~~~~~~p~~~G~e~~G~V~~vG~~v~~~~   96 (365)
                      |+++++.+++.+++.++|.|.| .++||+||+.++++|++|+....|.+..   ..+|.++|||++|+|+++|+++++++
T Consensus         1 m~a~~~~~~~~~~~~~~~~p~~~~~~~v~i~v~~~~i~~~d~~~~~g~~~~---~~~p~~~G~e~~G~V~~vG~~v~~~~   77 (386)
T cd08283           1 MKALVWHGKGDVRVEEVPDPKIEDPTDAIVRVTATAICGSDLHLYHGYIPG---MKKGDILGHEFMGVVEEVGPEVRNLK   77 (386)
T ss_pred             CeeEEEecCCCceEEeCCCCCCCCCCeEEEEEEEEecchhhhhhhcCCCCC---CCCCccccccceEEEEEeCCCCCCCC
Confidence            6788898889999999999998 5999999999999999999998875432   34588999999999999999999999


Q ss_pred             CCCEEEEcCCcCCCCCccccCCCCCCCCCccccc---------------c----CCCCcceeeEEeecCC--ceEECCCC
Q 017868           97 PGDRVALEPGISCWRCDHCKGGRYNLCPEMKFFA---------------T----PPVHGSLANQVVHPAD--LCFKLPDN  155 (365)
Q Consensus        97 ~Gd~V~~~~~~~~~~~~~~~~~~~~~~~~~~~~~---------------~----~~~~g~~~~~~~v~~~--~~~~iP~~  155 (365)
                      +||+|++.+...|++|++|..+.+++|++.....               .    ....|+|+||+.++++  .++++|++
T Consensus        78 ~Gd~V~~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~v~~~~~~~~~lp~~  157 (386)
T cd08283          78 VGDRVVVPFTIACGECFYCKRGLYSQCDNTNPSAEMAKLYGHAGAGIFGYSHLTGGYAGGQAEYVRVPFADVGPFKIPDD  157 (386)
T ss_pred             CCCEEEEcCcCCCCCChhhcCCCcccCCCcccccccccccccccccccccccccCCCCCeeEEEEEcccccCeEEECCCC
Confidence            9999999998899999999999999998754321               0    1236999999999987  89999999


Q ss_pred             CCcchhccch-hhHHHHHHHHhcCCCCCCEEEEEcCCHHHHHHHHHHHHHCCCCeEEEEeCChhHHHHHHHcCCCEEEeC
Q 017868          156 VSLEEGAMCE-PLSVGLHACRRANIGPETNVLIMGAGPIGLVTMLGAPRAFGAPRIVIVDVDDYRLSVAKEIGADNIVKV  234 (365)
Q Consensus       156 ~~~~~a~~~~-~~~~a~~~~~~~~~~~g~~vlI~G~g~~G~~ai~~l~~~~g~~~vi~v~~~~~~~~~~~~~g~~~~~~~  234 (365)
                      +++++|+.++ .+.+||++++.+++.+|++|||+|+|.+|+++++ +++..|+.+++++++++++.+++++++...++++
T Consensus       158 ~~~~~aa~l~~~~~ta~~~l~~~~~~~g~~VlV~g~G~vG~~~~~-la~~~g~~~vi~~~~~~~~~~~~~~~~~~~vi~~  236 (386)
T cd08283         158 LSDEKALFLSDILPTGYHAAELAEVKPGDTVAVWGCGPVGLFAAR-SAKLLGAERVIAIDRVPERLEMARSHLGAETINF  236 (386)
T ss_pred             CCHHHHhhhccchhhhHHHHhhccCCCCCEEEEECCCHHHHHHHH-HHHHcCCCEEEEEcCCHHHHHHHHHcCCcEEEcC
Confidence            9999999876 7889999997788999999999988999999999 9999998678999999999999999854455554


Q ss_pred             CCCcccHHHHHHHHHHHhCCCceEEEeCCCC---------------------HHHHHHHHHhcccCCEEEEEccCCCC-c
Q 017868          235 STNLQDIAEEVEKIQKAMGTGIDVSFDCAGL---------------------NKTMSTALGATCAGGKVCLVGMGHHE-M  292 (365)
Q Consensus       235 ~~~~~~~~~~i~~~~~~~~~~~d~vid~~g~---------------------~~~~~~~~~~l~~~G~~~~~g~~~~~-~  292 (365)
                      ... .++.+.++++..  +.++|++||++|+                     ...+..++++++++|+++.+|..... .
T Consensus       237 ~~~-~~~~~~l~~~~~--~~~~D~vld~vg~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~G~iv~~g~~~~~~~  313 (386)
T cd08283         237 EEV-DDVVEALRELTG--GRGPDVCIDAVGMEAHGSPLHKAEQALLKLETDRPDALREAIQAVRKGGTVSIIGVYGGTVN  313 (386)
T ss_pred             Ccc-hHHHHHHHHHcC--CCCCCEEEECCCCcccccccccccccccccccCchHHHHHHHHHhccCCEEEEEcCCCCCcC
Confidence            321 146666665532  5589999999974                     23677899999999999999854332 2


Q ss_pred             cccchHhhhcCcEEEeeccc-CCcHHHHHHHHHcCCCCCCCceEEEecCChhhHHHHHHHHhcCC-CceEEEEeC
Q 017868          293 TVPLTPAAVREVDVVGVFRY-KNTWPLCLELLRSGKIDVKPLVTHRFGFSQKEVEEAFETSARGG-TAIKVMFNL  365 (365)
Q Consensus       293 ~~~~~~~~~~~~~i~~~~~~-~~~~~~~~~~l~~g~~~~~~~~~~~~~~~~~~~~~a~~~~~~~~-~~gk~vi~~  365 (365)
                      .........+++++.+.... .+.+.+++++++++.+...+..++.|++  +++.+|++.+.++. ..+|+||+.
T Consensus       314 ~~~~~~~~~~~~~i~~~~~~~~~~~~~~~~~l~~g~l~~~~~~~~~~~l--~~~~~a~~~~~~~~~~~~k~~~~~  386 (386)
T cd08283         314 KFPIGAAMNKGLTLRMGQTHVQRYLPRLLELIESGELDPSFIITHRLPL--EDAPEAYKIFDKKEDGCIKVVLKP  386 (386)
T ss_pred             ccCHHHHHhCCcEEEeccCCchHHHHHHHHHHHcCCCChhHceEEEecH--HHHHHHHHHHHhCCCCeEEEEecC
Confidence            23333456788888886544 5678899999999998654456788888  99999999988875 578999863

Members identified as glutathione-dependent formaldehyde dehydrogenase(FDH), a member of the zinc-dependent/medium chain alcohol dehydrogenase family. FDH converts formaldehyde and NAD(P) to formate and NAD(P)H. The initial step in this process the spontaneous formation of a S-(hydroxymethyl)glutathione adduct from formaldehyde and glutathione, followed by FDH-mediated oxidation (and detoxification) of the adduct to S-formylglutathione. MDH family uses NAD(H) as a cofactor in the interconversion of alcohols and aldehydes, or ketones. Like many zinc-dependent alcohol dehydrogenases (ADH) of the medium chain alcohol dehydrogenase/reductase family (MDR), these FDHs form dimers, with 4 zinc ions per dimer. The medium chain alcohol dehydrogenase family (MDR) has a NAD(P)(H)-binding domain in a Rossmann fold of a beta-alpha form. The N-terminal region typically has an all-beta catalytic domain. T

>cd05284 arabinose_DH_like D-arabinose dehydrogenase

Probab=100.00  E-value=1.2e-41  Score=312.42  Aligned_cols=335  Identities=28%  Similarity=0.490  Sum_probs=280.7

Q ss_pred             ceeEEEecC-CceEEEEecCCCCCCCcEEEEEeeeeeCcccHhhhhccccCCccCCCCcccCccceEEEEEeCCCCCCCC
Q 017868           18 NMAAWLLGV-NTLKIQPFELPSLGPYDVLVRMKAVGICGSDVHYLKTLRCADFVVKEPMVIGHECAGVIEKVGSEVKTLV   96 (365)
Q Consensus        18 ~~~~~~~~~-~~l~~~~~~~p~~~~~eVlI~v~~~~l~~~D~~~~~g~~~~~~~~~~p~~~G~e~~G~V~~vG~~v~~~~   96 (365)
                      |+++++..+ +.+++.+.+.|++.++||+|||.++++|+.|+....|.+.......+|.++|+|++|+|+++|+++++|+
T Consensus         1 ~ka~~~~~~~~~~~~~~~~~~~~~~~~v~v~v~~~~i~~~d~~~~~g~~~~~~~~~~~~~~G~e~~G~V~~vG~~v~~~~   80 (340)
T cd05284           1 MKAARLYEYGKPLRLEDVPVPEPGPGQVLVRVGGAGVCHSDLHVIDGVWGGILPYKLPFTLGHENAGWVEEVGSGVDGLK   80 (340)
T ss_pred             CeeeEeccCCCCceEEeCCCCCCCCCeEEEEEEEEeecchhHHHHcCCCcccccCCCCeecccceeEEEEEeCCCCCcCc
Confidence            578888865 6899999999999999999999999999999998877553323356688999999999999999999999


Q ss_pred             CCCEEEEcCCcCCCCCccccCCCCCCCCCccccccCCCCcceeeEEeecCCceEECCCCCCcchhccch-hhHHHHHHHH
Q 017868           97 PGDRVALEPGISCWRCDHCKGGRYNLCPEMKFFATPPVHGSLANQVVHPADLCFKLPDNVSLEEGAMCE-PLSVGLHACR  175 (365)
Q Consensus        97 ~Gd~V~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~v~~~~~~~iP~~~~~~~a~~~~-~~~~a~~~~~  175 (365)
                      +||+|++.+...|+.|..|..+..++|++..+.+. ..+|+|++|+.+++++++++|+++++++++.++ .+.|||+++.
T Consensus        81 ~Gd~V~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~~~g~~~~~~~v~~~~~~~~P~~ls~~~aa~l~~~~~ta~~~l~  159 (340)
T cd05284          81 EGDPVVVHPPWGCGTCRYCRRGEENYCENARFPGI-GTDGGFAEYLLVPSRRLVKLPRGLDPVEAAPLADAGLTAYHAVK  159 (340)
T ss_pred             CCCEEEEcCCCCCCCChHHhCcCcccCCCCcccCc-cCCCcceeeEEecHHHeEECCCCCCHHHhhhhcchHHHHHHHHH
Confidence            99999999999999999999999999999988877 567999999999999999999999999988886 7889999985


Q ss_pred             h--cCCCCCCEEEEEcCCHHHHHHHHHHHHHCCCCeEEEEeCChhHHHHHHHcCCCEEEeCCCCcccHHHHHHHHHHHhC
Q 017868          176 R--ANIGPETNVLIMGAGPIGLVTMLGAPRAFGAPRIVIVDVDDYRLSVAKEIGADNIVKVSTNLQDIAEEVEKIQKAMG  253 (365)
Q Consensus       176 ~--~~~~~g~~vlI~G~g~~G~~ai~~l~~~~g~~~vi~v~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~i~~~~~~~~  253 (365)
                      .  ..+.++++|||+|+|.+|+++++ +++..|...++++++++++.+.++++|++++++++.  . +.+.+++...  +
T Consensus       160 ~~~~~~~~~~~vlI~g~~~vg~~~~~-~a~~~g~~~v~~~~~~~~~~~~~~~~g~~~~~~~~~--~-~~~~i~~~~~--~  233 (340)
T cd05284         160 KALPYLDPGSTVVVIGVGGLGHIAVQ-ILRALTPATVIAVDRSEEALKLAERLGADHVLNASD--D-VVEEVRELTG--G  233 (340)
T ss_pred             HhcccCCCCCEEEEEcCcHHHHHHHH-HHHHhCCCcEEEEeCCHHHHHHHHHhCCcEEEcCCc--c-HHHHHHHHhC--C
Confidence            4  46889999999999889999999 999999335777778889999999999988776543  2 6666665532  4


Q ss_pred             CCceEEEeCCCCHHHHHHHHHhcccCCEEEEEccCCCCccccchHhhhcCcEEEeeccc-CCcHHHHHHHHHcCCCCCCC
Q 017868          254 TGIDVSFDCAGLNKTMSTALGATCAGGKVCLVGMGHHEMTVPLTPAAVREVDVVGVFRY-KNTWPLCLELLRSGKIDVKP  332 (365)
Q Consensus       254 ~~~d~vid~~g~~~~~~~~~~~l~~~G~~~~~g~~~~~~~~~~~~~~~~~~~i~~~~~~-~~~~~~~~~~l~~g~~~~~~  332 (365)
                      .++|+++|++|........+++|+++|+++.+|.... ..+.......+++++.+.... ...+.+++++++++.+.  +
T Consensus       234 ~~~dvvld~~g~~~~~~~~~~~l~~~g~~i~~g~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~g~l~--~  310 (340)
T cd05284         234 RGADAVIDFVGSDETLALAAKLLAKGGRYVIVGYGGH-GRLPTSDLVPTEISVIGSLWGTRAELVEVVALAESGKVK--V  310 (340)
T ss_pred             CCCCEEEEcCCCHHHHHHHHHHhhcCCEEEEEcCCCC-CccCHHHhhhcceEEEEEecccHHHHHHHHHHHHhCCCC--c
Confidence            6899999999976688899999999999999985442 223333345688888876543 56788999999999884  3


Q ss_pred             ceEEEecCChhhHHHHHHHHhcCCCceEEEEeC
Q 017868          333 LVTHRFGFSQKEVEEAFETSARGGTAIKVMFNL  365 (365)
Q Consensus       333 ~~~~~~~~~~~~~~~a~~~~~~~~~~gk~vi~~  365 (365)
                       ..+.|++  +++++|++.+++++..||+++.+
T Consensus       311 -~~~~~~~--~~~~~a~~~~~~~~~~gkvv~~~  340 (340)
T cd05284         311 -EITKFPL--EDANEALDRLREGRVTGRAVLVP  340 (340)
T ss_pred             -ceEEEeH--HHHHHHHHHHHcCCccceEEecC
Confidence             3466777  99999999999999999999864

This group contains arabinose dehydrogenase (AraDH) and related alcohol dehydrogenases. AraDH is a member of the medium chain dehydrogenase/reductase family and catalyzes the NAD(P)-dependent oxidation of D-arabinose and other pentoses, the initial step in the metabolism of d-arabinose into 2-oxoglutarate. Like the alcohol dehydrogenases, AraDH binds a zinc in the catalytic cleft as well as a distal structural zinc. AraDH forms homotetramers as a dimer of dimers. AraDH replaces a conserved catalytic His with replace with Arg, compared to the canonical ADH site. NAD(P)(H)-dependent oxidoreductases are the major enzymes in the interconversion of alcohols and aldehydes, or ketones. Alcohol dehydrogenase in the liver converts ethanol and NAD+ to acetaldehyde and NADH, while in yeast and some other microorganisms ADH catalyzes the conversion acetaldehyde to ethanol in alcoholic fermentation. ADH is a member of the medium chain alcohol d

>PRK05396 tdh L-threonine 3-dehydrogenase; Validated

Probab=100.00  E-value=1.9e-41  Score=311.05  Aligned_cols=337  Identities=31%  Similarity=0.563  Sum_probs=275.2

Q ss_pred             ceeEEEecC-CceEEEEecCCCCCCCcEEEEEeeeeeCcccHhhhhccccCCccCCCCcccCccceEEEEEeCCCCCCCC
Q 017868           18 NMAAWLLGV-NTLKIQPFELPSLGPYDVLVRMKAVGICGSDVHYLKTLRCADFVVKEPMVIGHECAGVIEKVGSEVKTLV   96 (365)
Q Consensus        18 ~~~~~~~~~-~~l~~~~~~~p~~~~~eVlI~v~~~~l~~~D~~~~~g~~~~~~~~~~p~~~G~e~~G~V~~vG~~v~~~~   96 (365)
                      ||++++.++ +.+++.+.|.|.|.++||+||+.++++|+.|+.++.+.........+|.++|||++|+|+++|+++++++
T Consensus         1 ~~~~~~~~~~~~~~~~~~~~p~~~~~evlV~v~~~~v~~~d~~~~~~~~~~~~~~~~p~~~g~e~~G~V~~vG~~v~~~~   80 (341)
T PRK05396          1 MKALVKLKAEPGLWLTDVPVPEPGPNDVLIKVKKTAICGTDVHIYNWDEWAQKTIPVPMVVGHEFVGEVVEVGSEVTGFK   80 (341)
T ss_pred             CceEEEecCCCceEEEECCCCCCCCCeEEEEEEEEEEcccchHhhcCCCcccccCCCCcccceeeEEEEEEeCCCCCcCC
Confidence            467777665 4799999999999999999999999999999987665322211234677899999999999999999999


Q ss_pred             CCCEEEEcCCcCCCCCccccCCCCCCCCCccccccCCCCcceeeEEeecCCceEECCCCCCcchhccchhhHHHHHHHHh
Q 017868           97 PGDRVALEPGISCWRCDHCKGGRYNLCPEMKFFATPPVHGSLANQVVHPADLCFKLPDNVSLEEGAMCEPLSVGLHACRR  176 (365)
Q Consensus        97 ~Gd~V~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~v~~~~~~~iP~~~~~~~a~~~~~~~~a~~~~~~  176 (365)
                      +||+|++.+..+|+.|++|..+++++|+.....+ ...+|+|++|+.++++.++++|+++++++++.+.++.++++++..
T Consensus        81 ~Gd~V~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~~~~g~~~~~~~v~~~~~~~iP~~l~~~~~~~~~~~~~~~~~~~~  159 (341)
T PRK05396         81 VGDRVSGEGHIVCGHCRNCRAGRRHLCRNTKGVG-VNRPGAFAEYLVIPAFNVWKIPDDIPDDLAAIFDPFGNAVHTALS  159 (341)
T ss_pred             CCCEEEECCCCCCCCChhhhCcChhhCCCcceee-ecCCCcceeeEEechHHeEECcCCCCHHHhHhhhHHHHHHHHHHc
Confidence            9999999999999999999999999998754333 235799999999999999999999999888866677777665533


Q ss_pred             cCCCCCCEEEEEcCCHHHHHHHHHHHHHCCCCeEEEEeCChhHHHHHHHcCCCEEEeCCCCcccHHHHHHHHHHHhCCCc
Q 017868          177 ANIGPETNVLIMGAGPIGLVTMLGAPRAFGAPRIVIVDVDDYRLSVAKEIGADNIVKVSTNLQDIAEEVEKIQKAMGTGI  256 (365)
Q Consensus       177 ~~~~~g~~vlI~G~g~~G~~ai~~l~~~~g~~~vi~v~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~i~~~~~~~~~~~  256 (365)
                       ...+|++|+|+|+|++|++++| +++..|+++++++++++++.++++++|++.+++++.  .++.+.++++..  +.++
T Consensus       160 -~~~~g~~vlV~~~g~vg~~~~~-la~~~G~~~v~~~~~~~~~~~~~~~lg~~~~~~~~~--~~~~~~~~~~~~--~~~~  233 (341)
T PRK05396        160 -FDLVGEDVLITGAGPIGIMAAA-VAKHVGARHVVITDVNEYRLELARKMGATRAVNVAK--EDLRDVMAELGM--TEGF  233 (341)
T ss_pred             -CCCCCCeEEEECCCHHHHHHHH-HHHHcCCCEEEEEcCCHHHHHHHHHhCCcEEecCcc--ccHHHHHHHhcC--CCCC
Confidence             3468999999988999999999 999999976788888899999999999988876543  466666665532  5789


Q ss_pred             eEEEeCCCCHHHHHHHHHhcccCCEEEEEccCCCCccccchHhhhcCcEEEeeccc--CCcHHHHHHHHHcCCCCCCCce
Q 017868          257 DVSFDCAGLNKTMSTALGATCAGGKVCLVGMGHHEMTVPLTPAAVREVDVVGVFRY--KNTWPLCLELLRSGKIDVKPLV  334 (365)
Q Consensus       257 d~vid~~g~~~~~~~~~~~l~~~G~~~~~g~~~~~~~~~~~~~~~~~~~i~~~~~~--~~~~~~~~~~l~~g~~~~~~~~  334 (365)
                      |++|||.|....+...+++++++|+++.+|.......+....++++++++.+....  .+.+.+++++++++ +.+.+.+
T Consensus       234 d~v~d~~g~~~~~~~~~~~l~~~G~~v~~g~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~-~~~~~~~  312 (341)
T PRK05396        234 DVGLEMSGAPSAFRQMLDNMNHGGRIAMLGIPPGDMAIDWNKVIFKGLTIKGIYGREMFETWYKMSALLQSG-LDLSPII  312 (341)
T ss_pred             CEEEECCCCHHHHHHHHHHHhcCCEEEEEecCCCCCcccHHHHhhcceEEEEEEccCccchHHHHHHHHHcC-CChhHhe
Confidence            99999999877889999999999999999865444444445677788888876432  34566788999988 4345567


Q ss_pred             EEEecCChhhHHHHHHHHhcCCCceEEEEeC
Q 017868          335 THRFGFSQKEVEEAFETSARGGTAIKVMFNL  365 (365)
Q Consensus       335 ~~~~~~~~~~~~~a~~~~~~~~~~gk~vi~~  365 (365)
                      .+.+++  +++.+|++.+.++. .||++++|
T Consensus       313 ~~~~~l--~~~~~a~~~~~~~~-~gk~vv~~  340 (341)
T PRK05396        313 THRFPI--DDFQKGFEAMRSGQ-SGKVILDW  340 (341)
T ss_pred             EEEEeH--HHHHHHHHHHhcCC-CceEEEec
Confidence            788888  99999999998876 79999975

>cd05279 Zn_ADH1 Liver alcohol dehydrogenase and related zinc-dependent alcohol dehydrogenases

Probab=100.00  E-value=2.4e-41  Score=312.62  Aligned_cols=334  Identities=27%  Similarity=0.455  Sum_probs=275.8

Q ss_pred             eeEEEec-CCceEEEEecCCCCCCCcEEEEEeeeeeCcccHhhhhccccCCccCCCCcccCccceEEEEEeCCCCCCCCC
Q 017868           19 MAAWLLG-VNTLKIQPFELPSLGPYDVLVRMKAVGICGSDVHYLKTLRCADFVVKEPMVIGHECAGVIEKVGSEVKTLVP   97 (365)
Q Consensus        19 ~~~~~~~-~~~l~~~~~~~p~~~~~eVlI~v~~~~l~~~D~~~~~g~~~~~~~~~~p~~~G~e~~G~V~~vG~~v~~~~~   97 (365)
                      +++++.+ ++++++.+.+.|.+.++||+||+.++++|+.|++...|...    ..+|.++|||++|+|+++|++++.+++
T Consensus         2 ~a~~~~~~~~~~~~~~~~~p~~~~~~vlv~v~~~~i~~~d~~~~~g~~~----~~~~~i~g~e~~G~V~~vG~~v~~~~~   77 (365)
T cd05279           2 KAAVLWEKGKPLSIEEIEVAPPKAGEVRIKVVATGVCHTDLHVIDGKLP----TPLPVILGHEGAGIVESIGPGVTTLKP   77 (365)
T ss_pred             ceeEEecCCCCcEEEEeecCCCCCCeEEEEEEEeeecchhHHHhcCCCC----CCCCcccccceeEEEEEeCCCcccCCC
Confidence            4677775 45899999999999999999999999999999998876432    345789999999999999999999999


Q ss_pred             CCEEEEcCCcCCCCCccccCCCCCCCCCccccccC--------------------CCCcceeeEEeecCCceEECCCCCC
Q 017868           98 GDRVALEPGISCWRCDHCKGGRYNLCPEMKFFATP--------------------PVHGSLANQVVHPADLCFKLPDNVS  157 (365)
Q Consensus        98 Gd~V~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~--------------------~~~g~~~~~~~v~~~~~~~iP~~~~  157 (365)
                      ||+|++.+..+|++|.+|+.+.+++|......+..                    ...|+|++|+.++++.++++|++++
T Consensus        78 Gd~Vv~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~g~~a~~~~v~~~~~~~lP~~~~  157 (365)
T cd05279          78 GDKVIPLFGPQCGKCKQCLNPRPNLCSKSRGTNGRGLMSDGTSRFTCKGKPIHHFLGTSTFAEYTVVSEISLAKIDPDAP  157 (365)
T ss_pred             CCEEEEcCCCCCCCChhhcCCCcccCCCcccccccccccCCcceeeccCCccccccccccccceEEecCCceEECCCCCC
Confidence            99999999899999999999999999876544210                    0247899999999999999999999


Q ss_pred             cchhccch-hhHHHHHHH-HhcCCCCCCEEEEEcCCHHHHHHHHHHHHHCCCCeEEEEeCChhHHHHHHHcCCCEEEeCC
Q 017868          158 LEEGAMCE-PLSVGLHAC-RRANIGPETNVLIMGAGPIGLVTMLGAPRAFGAPRIVIVDVDDYRLSVAKEIGADNIVKVS  235 (365)
Q Consensus       158 ~~~a~~~~-~~~~a~~~~-~~~~~~~g~~vlI~G~g~~G~~ai~~l~~~~g~~~vi~v~~~~~~~~~~~~~g~~~~~~~~  235 (365)
                      +++++.+. .+.+||+++ +.+++++|++|||+|+|++|+++++ +++.+|++.++++++++++.++++++|++++++..
T Consensus       158 ~~~a~~~~~~~~ta~~al~~~~~~~~g~~vlI~g~g~vG~~a~~-~a~~~G~~~v~~~~~~~~~~~~~~~~g~~~~v~~~  236 (365)
T cd05279         158 LEKVCLIGCGFSTGYGAAVNTAKVTPGSTCAVFGLGGVGLSVIM-GCKAAGASRIIAVDINKDKFEKAKQLGATECINPR  236 (365)
T ss_pred             HHHhhHhccchhHHHHHHHhccCCCCCCEEEEECCCHHHHHHHH-HHHHcCCCeEEEEeCCHHHHHHHHHhCCCeecccc
Confidence            99988886 788899886 5688999999999988999999999 99999998788888899999999999998877654


Q ss_pred             CCcccHHHHHHHHHHHhCCCceEEEeCCCCHHHHHHHHHhcc-cCCEEEEEccCC--CCccccchHhhhcCcEEEeecc-
Q 017868          236 TNLQDIAEEVEKIQKAMGTGIDVSFDCAGLNKTMSTALGATC-AGGKVCLVGMGH--HEMTVPLTPAAVREVDVVGVFR-  311 (365)
Q Consensus       236 ~~~~~~~~~i~~~~~~~~~~~d~vid~~g~~~~~~~~~~~l~-~~G~~~~~g~~~--~~~~~~~~~~~~~~~~i~~~~~-  311 (365)
                      +.+.++.+.+++..   ++++|++||++|....+..++++++ ++|+++.+|...  ....+....+ .+..++.+.+. 
T Consensus       237 ~~~~~~~~~l~~~~---~~~~d~vid~~g~~~~~~~~~~~l~~~~G~~v~~g~~~~~~~~~~~~~~~-~~~~~l~g~~~~  312 (365)
T cd05279         237 DQDKPIVEVLTEMT---DGGVDYAFEVIGSADTLKQALDATRLGGGTSVVVGVPPSGTEATLDPNDL-LTGRTIKGTVFG  312 (365)
T ss_pred             cccchHHHHHHHHh---CCCCcEEEECCCCHHHHHHHHHHhccCCCEEEEEecCCCCCceeeCHHHH-hcCCeEEEEecc
Confidence            32225555565543   4689999999997678889999999 999999998643  2334444445 67777777643 


Q ss_pred             ---cCCcHHHHHHHHHcCCCCCCCceEEEecCChhhHHHHHHHHhcCCCceEEEEe
Q 017868          312 ---YKNTWPLCLELLRSGKIDVKPLVTHRFGFSQKEVEEAFETSARGGTAIKVMFN  364 (365)
Q Consensus       312 ---~~~~~~~~~~~l~~g~~~~~~~~~~~~~~~~~~~~~a~~~~~~~~~~gk~vi~  364 (365)
                         ..+.+.+++++++++.+.+.+..+++|++  +++.+|++.+++++. .|++++
T Consensus       313 ~~~~~~~~~~~~~l~~~~~l~~~~~~~~~~~l--~~~~~a~~~~~~~~~-~~~~~~  365 (365)
T cd05279         313 GWKSKDSVPKLVALYRQKKFPLDELITHVLPF--EEINDGFDLMRSGES-IRTILT  365 (365)
T ss_pred             CCchHhHHHHHHHHHHcCCcchhHheeeeecH--HHHHHHHHHHhCCCc-eeeeeC
Confidence               25678899999999998655567888888  999999999887754 577764

NAD(P)(H)-dependent oxidoreductases are the major enzymes in the interconversion of alcohols and aldehydes, or ketones. Alcohol dehydrogenase in the liver converts ethanol and NAD+ to acetaldehyde and NADH, while in yeast and some other microorganisms ADH catalyzes the conversion acetaldehyde to ethanol in alcoholic fermentation. There are 7 vertebrate ADH 7 classes, 6 of which have been identified in humans. Class III, glutathione-dependent formaldehyde dehydrogenase, has been identified as the primordial form and exists in diverse species, including plants, micro-organisms, vertebrates, and invertebrates. Class I, typified by liver dehydrogenase, is an evolving form. Gene duplication and functional specialization of ADH into ADH classes and subclasses created numerous forms in vertebrates. For example, the A, B and C (formerly alpha, beta, gamma) human class I subunits have high overall

>cd08246 crotonyl_coA_red crotonyl-CoA reductase

Probab=100.00  E-value=1.6e-41  Score=317.09  Aligned_cols=342  Identities=21%  Similarity=0.238  Sum_probs=278.1

Q ss_pred             chhcceeEEEecC------CceEEEEecCCCCCCCcEEEEEeeeeeCcccHhhhhccccCCc------c-CCCCcccCcc
Q 017868           14 GEEVNMAAWLLGV------NTLKIQPFELPSLGPYDVLVRMKAVGICGSDVHYLKTLRCADF------V-VKEPMVIGHE   80 (365)
Q Consensus        14 ~~~~~~~~~~~~~------~~l~~~~~~~p~~~~~eVlI~v~~~~l~~~D~~~~~g~~~~~~------~-~~~p~~~G~e   80 (365)
                      -+.+|+++++..+      ..+++.++|.|.++++||+|||.++++|++|+....|......      . ...+.++|||
T Consensus         9 ~~~~~~a~~~~~~~~g~~~~~~~~~~~~~p~l~~~evlI~v~~~gi~~~d~~~~~g~~~~~~~~~~~~~~~~~~~~~G~e   88 (393)
T cd08246           9 VPEKMYAFAIRPERYGDPAQAIQLEDVPVPELGPGEVLVAVMAAGVNYNNVWAALGEPVSTFAARQRRGRDEPYHIGGSD   88 (393)
T ss_pred             CchhhhheeeecccCCCcccceEEeecCCCCCCCCEEEEEEEEEeeccchhhhhcCCCccccccccccCCCCCccccccc
Confidence            4567889887521      2588999999999999999999999999999988766411100      0 1123589999


Q ss_pred             ceEEEEEeCCCCCCCCCCCEEEEcCCcCCCCCccccCCCCCCCCCccccccCCCCcceeeEEeecCCceEECCCCCCcch
Q 017868           81 CAGVIEKVGSEVKTLVPGDRVALEPGISCWRCDHCKGGRYNLCPEMKFFATPPVHGSLANQVVHPADLCFKLPDNVSLEE  160 (365)
Q Consensus        81 ~~G~V~~vG~~v~~~~~Gd~V~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~v~~~~~~~iP~~~~~~~  160 (365)
                      ++|+|+++|++++.+++||+|++++...|+.|++|..+..++|....+++....+|+|++|+.++..+++++|+++++++
T Consensus        89 ~~G~V~~vG~~v~~~~~Gd~V~~~~~~~~~~~~~c~~~~~~~~~~~~~~g~~~~~g~~a~y~~v~~~~l~~iP~~l~~~~  168 (393)
T cd08246          89 ASGIVWAVGEGVKNWKVGDEVVVHCSVWDGNDPERAGGDPMFDPSQRIWGYETNYGSFAQFALVQATQLMPKPKHLSWEE  168 (393)
T ss_pred             eEEEEEEeCCCCCcCCCCCEEEEeccccccCcccccccccccccccccccccCCCCcceeEEEechHHeEECCCCCCHHH
Confidence            99999999999999999999999999999999999999999999887777755679999999999999999999999999


Q ss_pred             hccch-hhHHHHHHHHh---cCCCCCCEEEEEcC-CHHHHHHHHHHHHHCCCCeEEEEeCChhHHHHHHHcCCCEEEeCC
Q 017868          161 GAMCE-PLSVGLHACRR---ANIGPETNVLIMGA-GPIGLVTMLGAPRAFGAPRIVIVDVDDYRLSVAKEIGADNIVKVS  235 (365)
Q Consensus       161 a~~~~-~~~~a~~~~~~---~~~~~g~~vlI~G~-g~~G~~ai~~l~~~~g~~~vi~v~~~~~~~~~~~~~g~~~~~~~~  235 (365)
                      ++.++ ++.+||+++..   ++++++++|||+|+ |++|+++++ +++.+|++ ++++++++++.++++++|++.+++..
T Consensus       169 aa~l~~~~~tA~~al~~~~~~~~~~g~~vlV~ga~g~iG~a~~~-lak~~G~~-vv~~~~s~~~~~~~~~~G~~~~i~~~  246 (393)
T cd08246         169 AAAYMLVGATAYRMLFGWNPNTVKPGDNVLIWGASGGLGSMAIQ-LARAAGAN-PVAVVSSEEKAEYCRALGAEGVINRR  246 (393)
T ss_pred             HhhhcccHHHHHHHHhhcccccCCCCCEEEEECCCcHHHHHHHH-HHHHcCCe-EEEEeCCHHHHHHHHHcCCCEEEccc
Confidence            88765 88899998742   67899999999997 999999999 99999995 55677889999999999999888753


Q ss_pred             CCc--------------------ccHHHHHHHHHHHhCC-CceEEEeCCCCHHHHHHHHHhcccCCEEEEEccCCC-Ccc
Q 017868          236 TNL--------------------QDIAEEVEKIQKAMGT-GIDVSFDCAGLNKTMSTALGATCAGGKVCLVGMGHH-EMT  293 (365)
Q Consensus       236 ~~~--------------------~~~~~~i~~~~~~~~~-~~d~vid~~g~~~~~~~~~~~l~~~G~~~~~g~~~~-~~~  293 (365)
                      +.+                    ..+.+.+.+++  .+. ++|++||++|. ..+..++++++++|+++.+|.... ...
T Consensus       247 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~l~--~~~~g~d~vid~~g~-~~~~~~~~~l~~~G~~v~~g~~~~~~~~  323 (393)
T cd08246         247 DFDHWGVLPDVNSEAYTAWTKEARRFGKAIWDIL--GGREDPDIVFEHPGR-ATFPTSVFVCDRGGMVVICAGTTGYNHT  323 (393)
T ss_pred             ccccccccccccchhhhhhhhccchHHHHHHHHh--CCCCCCeEEEECCch-HhHHHHHHHhccCCEEEEEcccCCCCCC
Confidence            211                    12344444443  244 79999999996 578889999999999999975432 223


Q ss_pred             ccchHhhhcCcEEEeeccc-CCcHHHHHHHHHcCCCCCCCceEEEecCChhhHHHHHHHHhcC-CCceEEEEe
Q 017868          294 VPLTPAAVREVDVVGVFRY-KNTWPLCLELLRSGKIDVKPLVTHRFGFSQKEVEEAFETSARG-GTAIKVMFN  364 (365)
Q Consensus       294 ~~~~~~~~~~~~i~~~~~~-~~~~~~~~~~l~~g~~~~~~~~~~~~~~~~~~~~~a~~~~~~~-~~~gk~vi~  364 (365)
                      .+...+..++.++.+.+.. .+.+.+++++++++.+  .+..+++|++  +++++|++.+.++ +..||+++-
T Consensus       324 ~~~~~l~~~~~~i~g~~~~~~~~~~~~~~~~~~~~l--~~~~~~~~~l--~~~~~a~~~~~~~~~~~gkvvv~  392 (393)
T cd08246         324 YDNRYLWMRQKRIQGSHFANDREAAEANRLVMKGRI--DPCLSKVFSL--DETPDAHQLMHRNQHHVGNMAVL  392 (393)
T ss_pred             CcHHHHhhheeEEEecccCcHHHHHHHHHHHHcCCc--eeeeeEEEeH--HHHHHHHHHHHhCccccceEEEe
Confidence            4445566788888887554 3578899999999988  4557788888  9999999999998 789999874

Crotonyl-CoA reductase, a member of the medium chain dehydrogenase/reductase family, catalyzes the NADPH-dependent conversion of crotonyl-CoA to butyryl-CoA, a step in (2S)-methylmalonyl-CoA production for straight-chain fatty acid biosynthesis. Like enoyl reductase, another enzyme in fatty acid synthesis, crotonyl-CoA reductase is a member of the zinc-dependent alcohol dehydrogenase-like medium chain dehydrogenase/reductase family. The medium chain dehydrogenases/reductase (MDR)/zinc-dependent alcohol dehydrogenase-like family, which contains the zinc-dependent alcohol dehydrogenase (ADH-Zn) and related proteins, is a diverse group of proteins related to the first identified member, class I mammalian ADH. MDRs display a broad range of activities and are distinguished from the smaller short chain dehydrogenases (~ 250 amino acids vs. the ~ 350 amino acids of the MDR). The MDR proteins have 2 domains: a C-terminal NAD(P) binding-Rossma

>cd08232 idonate-5-DH L-idonate 5-dehydrogenase

Probab=100.00  E-value=3.4e-41  Score=309.20  Aligned_cols=334  Identities=38%  Similarity=0.668  Sum_probs=272.7

Q ss_pred             EEecCCceEEEEecCCCCCCCcEEEEEeeeeeCcccHhhhhccccCCccCCCCcccCccceEEEEEeCCCCCCCCCCCEE
Q 017868           22 WLLGVNTLKIQPFELPSLGPYDVLVRMKAVGICGSDVHYLKTLRCADFVVKEPMVIGHECAGVIEKVGSEVKTLVPGDRV  101 (365)
Q Consensus        22 ~~~~~~~l~~~~~~~p~~~~~eVlI~v~~~~l~~~D~~~~~g~~~~~~~~~~p~~~G~e~~G~V~~vG~~v~~~~~Gd~V  101 (365)
                      |+.+.+.+++.+.+.|++.++||+|||.++++|+.|+..............+|.++|+|++|+|+++|+++++|++||+|
T Consensus         2 ~~~~~~~~~~~~~~~p~l~~~~v~I~v~~~~i~~~d~~~~~~~~~~~~~~~~p~~~g~e~~G~v~~vG~~v~~~~~Gd~V   81 (339)
T cd08232           2 VIHAAGDLRVEERPAPEPGPGEVRVRVAAGGICGSDLHYYQHGGFGTVRLREPMVLGHEVSGVVEAVGPGVTGLAPGQRV   81 (339)
T ss_pred             eeccCCceEEEEcCCCCCCCCEEEEEEEEEEECcccHHHHcCCCCCcccccCCeecCccceEEEEeeCCCCCcCCCCCEE
Confidence            56788999999999999999999999999999999988764211112223457889999999999999999999999999


Q ss_pred             EEcCCcCCCCCccccCCCCCCCCCcccccc----CCCCcceeeEEeecCCceEECCCCCCcchhccchhhHHHHHHHHhc
Q 017868          102 ALEPGISCWRCDHCKGGRYNLCPEMKFFAT----PPVHGSLANQVVHPADLCFKLPDNVSLEEGAMCEPLSVGLHACRRA  177 (365)
Q Consensus       102 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~----~~~~g~~~~~~~v~~~~~~~iP~~~~~~~a~~~~~~~~a~~~~~~~  177 (365)
                      ++.+..+|++|++|..+..+.|..+...+.    ....|+|++|+.++++.++++|+++++++|+.+.++.+|++++...
T Consensus        82 ~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~~g~~~~~v~v~~~~~~~iP~~~~~~~aa~~~~~~~a~~~l~~~  161 (339)
T cd08232          82 AVNPSRPCGTCDYCRAGRPNLCLNMRFLGSAMRFPHVQGGFREYLVVDASQCVPLPDGLSLRRAALAEPLAVALHAVNRA  161 (339)
T ss_pred             EEccCCcCCCChHHhCcCcccCccccceeeccccCCCCCceeeEEEechHHeEECcCCCCHHHhhhcchHHHHHHHHHhc
Confidence            999999999999999999999998654442    1246999999999999999999999999988766788899988654


Q ss_pred             CCCCCCEEEEEcCCHHHHHHHHHHHHHCCCCeEEEEeCChhHHHHHHHcCCCEEEeCCCCcccHHHHHHHHHHHhCCCce
Q 017868          178 NIGPETNVLIMGAGPIGLVTMLGAPRAFGAPRIVIVDVDDYRLSVAKEIGADNIVKVSTNLQDIAEEVEKIQKAMGTGID  257 (365)
Q Consensus       178 ~~~~g~~vlI~G~g~~G~~ai~~l~~~~g~~~vi~v~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~i~~~~~~~~~~~d  257 (365)
                      ...++++|||.|+|.+|++++| +++.+|+++++++++++++.++++++|++.+++++.  .+    +++... ...++|
T Consensus       162 ~~~~~~~VLI~g~g~vG~~~~~-lak~~G~~~v~~~~~s~~~~~~~~~~g~~~vi~~~~--~~----~~~~~~-~~~~vd  233 (339)
T cd08232         162 GDLAGKRVLVTGAGPIGALVVA-AARRAGAAEIVATDLADAPLAVARAMGADETVNLAR--DP----LAAYAA-DKGDFD  233 (339)
T ss_pred             CCCCCCEEEEECCCHHHHHHHH-HHHHcCCcEEEEECCCHHHHHHHHHcCCCEEEcCCc--hh----hhhhhc-cCCCcc
Confidence            4339999999888999999999 999999966888888888889999999988776543  22    222221 235699


Q ss_pred             EEEeCCCCHHHHHHHHHhcccCCEEEEEccCCCCccccchHhhhcCcEEEeecccCCcHHHHHHHHHcCCCCCCCceEEE
Q 017868          258 VSFDCAGLNKTMSTALGATCAGGKVCLVGMGHHEMTVPLTPAAVREVDVVGVFRYKNTWPLCLELLRSGKIDVKPLVTHR  337 (365)
Q Consensus       258 ~vid~~g~~~~~~~~~~~l~~~G~~~~~g~~~~~~~~~~~~~~~~~~~i~~~~~~~~~~~~~~~~l~~g~~~~~~~~~~~  337 (365)
                      +++|+.|....+...+++|+++|+++.++............+..+++++.+.....+.+++++++++++.+.+.+.+.++
T Consensus       234 ~vld~~g~~~~~~~~~~~L~~~G~~v~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~~~~~~~  313 (339)
T cd08232         234 VVFEASGAPAALASALRVVRPGGTVVQVGMLGGPVPLPLNALVAKELDLRGSFRFDDEFAEAVRLLAAGRIDVRPLITAV  313 (339)
T ss_pred             EEEECCCCHHHHHHHHHHHhcCCEEEEEecCCCCccCcHHHHhhcceEEEEEecCHHHHHHHHHHHHcCCCCchhheeEE
Confidence            99999997667889999999999999987543222223333466788888876667788999999999998655557788


Q ss_pred             ecCChhhHHHHHHHHhcCCCceEEEEeC
Q 017868          338 FGFSQKEVEEAFETSARGGTAIKVMFNL  365 (365)
Q Consensus       338 ~~~~~~~~~~a~~~~~~~~~~gk~vi~~  365 (365)
                      |++  +++.+|++.+.++...||+|+++
T Consensus       314 ~~~--~~~~~a~~~~~~~~~~gkvvv~~  339 (339)
T cd08232         314 FPL--EEAAEAFALAADRTRSVKVQLSF  339 (339)
T ss_pred             ecH--HHHHHHHHHHHhCCCceeEEEeC
Confidence            888  99999999999888899999874

L-idonate 5-dehydrogenase (L-ido 5-DH ) catalyzes the conversion of L-lodonate to 5-ketogluconate in the metabolism of L-Idonate to 6-P-gluconate. In E. coli, this GntII pathway is a subsidiary pathway to the canonical GntI system, which also phosphorylates and transports gluconate. L-ido 5-DH is found in an operon with a regulator indR, transporter idnT, 5-keto-D-gluconate 5-reductase, and Gnt kinase. L-ido 5-DH is a zinc-dependent alcohol dehydrogenase-like protein. The alcohol dehydrogenase ADH-like family of proteins is a diverse group of proteins related to the first identified member, class I mammalian ADH. This group is also called the medium chain dehydrogenases/reductase family (MDR) which displays a broad range of activities and are distinguished from the smaller short chain dehydrogenases(~ 250 amino acids vs. the ~ 350 amino acids of the MDR). The MDR proteins have 2 domains: a C-terminal NAD(P) binding-Rossmann fold domai

>cd08284 FDH_like_2 Glutathione-dependent formaldehyde dehydrogenase related proteins, child 2

Probab=100.00  E-value=5.5e-41  Score=308.47  Aligned_cols=334  Identities=29%  Similarity=0.503  Sum_probs=276.1

Q ss_pred             ceeEEEecCCceEEEEecCCCCC-CCcEEEEEeeeeeCcccHhhhhccccCCccCCCCcccCccceEEEEEeCCCCCCCC
Q 017868           18 NMAAWLLGVNTLKIQPFELPSLG-PYDVLVRMKAVGICGSDVHYLKTLRCADFVVKEPMVIGHECAGVIEKVGSEVKTLV   96 (365)
Q Consensus        18 ~~~~~~~~~~~l~~~~~~~p~~~-~~eVlI~v~~~~l~~~D~~~~~g~~~~~~~~~~p~~~G~e~~G~V~~vG~~v~~~~   96 (365)
                      |+++++.++..++++++|+|+|. ++||+|||.++++|+.|+....|...    ..+|.++|+|++|+|+++|+++++++
T Consensus         1 ~~a~~~~~~~~~~~~~~~~p~~~~~~~v~i~v~~~~i~~~d~~~~~g~~~----~~~~~~~g~e~~G~V~~vG~~v~~~~   76 (344)
T cd08284           1 MKAVVFKGPGDVRVEEVPIPQIQDPTDAIVKVTAAAICGSDLHIYRGHIP----STPGFVLGHEFVGEVVEVGPEVRTLK   76 (344)
T ss_pred             CeeEEEecCCCceEEeccCCCCCCCCeEEEEEEEeeccccchhhhcCCCC----CCCCcccccceEEEEEeeCCCccccC
Confidence            56888888889999999999985 99999999999999999988776432    34577899999999999999999999


Q ss_pred             CCCEEEEcCCcCCCCCccccCCCCCCCCCccccc---cCCCCcceeeEEeecCC--ceEECCCCCCcchhccch-hhHHH
Q 017868           97 PGDRVALEPGISCWRCDHCKGGRYNLCPEMKFFA---TPPVHGSLANQVVHPAD--LCFKLPDNVSLEEGAMCE-PLSVG  170 (365)
Q Consensus        97 ~Gd~V~~~~~~~~~~~~~~~~~~~~~~~~~~~~~---~~~~~g~~~~~~~v~~~--~~~~iP~~~~~~~a~~~~-~~~~a  170 (365)
                      +||+|++.+..+|++|.+|..++.+.|++...++   ....+|+|++|+.++++  .++++|+++++++++.++ .+.||
T Consensus        77 ~Gd~V~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~v~~~~~~~~~~p~~l~~~~a~~l~~~~~ta  156 (344)
T cd08284          77 VGDRVVSPFTIACGECFYCRRGQSGRCAKGGLFGYAGSPNLDGAQAEYVRVPFADGTLLKLPDGLSDEAALLLGDILPTG  156 (344)
T ss_pred             CCCEEEEcccCCCCCChHHhCcCcccCCCCccccccccCCCCCceeEEEEcccccCceEECCCCCCHHHhhhhcCchHHH
Confidence            9999999999999999999999999998776552   22346999999999965  999999999999988775 88899


Q ss_pred             HHHHHhcCCCCCCEEEEEcCCHHHHHHHHHHHHHCCCCeEEEEeCChhHHHHHHHcCCCEEEeCCCCcccHHHHHHHHHH
Q 017868          171 LHACRRANIGPETNVLIMGAGPIGLVTMLGAPRAFGAPRIVIVDVDDYRLSVAKEIGADNIVKVSTNLQDIAEEVEKIQK  250 (365)
Q Consensus       171 ~~~~~~~~~~~g~~vlI~G~g~~G~~ai~~l~~~~g~~~vi~v~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~i~~~~~  250 (365)
                      |++++..++.++++|||+|+|.+|+++++ +++.+|+.+++++++++++.++++++|+.. ++.  ...++...+.++..
T Consensus       157 ~~~~~~~~~~~~~~vlI~g~g~vg~~~~~-~a~~~g~~~v~~~~~~~~~~~~~~~~g~~~-~~~--~~~~~~~~l~~~~~  232 (344)
T cd08284         157 YFGAKRAQVRPGDTVAVIGCGPVGLCAVL-SAQVLGAARVFAVDPVPERLERAAALGAEP-INF--EDAEPVERVREATE  232 (344)
T ss_pred             HhhhHhcCCccCCEEEEECCcHHHHHHHH-HHHHcCCceEEEEcCCHHHHHHHHHhCCeE-Eec--CCcCHHHHHHHHhC
Confidence            99987788899999999988999999999 999999756788888889999999999753 333  33466666666542


Q ss_pred             HhCCCceEEEeCCCCHHHHHHHHHhcccCCEEEEEccCCC-CccccchHhhhcCcEEEeecc-cCCcHHHHHHHHHcCCC
Q 017868          251 AMGTGIDVSFDCAGLNKTMSTALGATCAGGKVCLVGMGHH-EMTVPLTPAAVREVDVVGVFR-YKNTWPLCLELLRSGKI  328 (365)
Q Consensus       251 ~~~~~~d~vid~~g~~~~~~~~~~~l~~~G~~~~~g~~~~-~~~~~~~~~~~~~~~i~~~~~-~~~~~~~~~~~l~~g~~  328 (365)
                        +.++|++||++|........+++++++|+++.+|.... ...........+++++.+... ..+.+++++++++++.+
T Consensus       233 --~~~~dvvid~~~~~~~~~~~~~~l~~~g~~v~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i  310 (344)
T cd08284         233 --GRGADVVLEAVGGAAALDLAFDLVRPGGVISSVGVHTAEEFPFPGLDAYNKNLTLRFGRCPVRSLFPELLPLLESGRL  310 (344)
T ss_pred             --CCCCCEEEECCCCHHHHHHHHHhcccCCEEEEECcCCCCCccccHHHHhhcCcEEEEecCCcchhHHHHHHHHHcCCC
Confidence              57899999999977788899999999999999986542 222333345567777765433 26789999999999998


Q ss_pred             CCCCceEEEecCChhhHHHHHHHHhcCCCceEEEEe
Q 017868          329 DVKPLVTHRFGFSQKEVEEAFETSARGGTAIKVMFN  364 (365)
Q Consensus       329 ~~~~~~~~~~~~~~~~~~~a~~~~~~~~~~gk~vi~  364 (365)
                      .+.+.+.+.|++  +++.++++.+.++.. +|+|++
T Consensus       311 ~~~~~~~~~~~~--~~~~~a~~~~~~~~~-~k~Vi~  343 (344)
T cd08284         311 DLEFLIDHRMPL--EEAPEAYRLFDKRKV-LKVVLD  343 (344)
T ss_pred             ChHHhEeeeecH--HHHHHHHHHHhcCCc-eEEEec
Confidence            544456777877  999999999888777 999986

Glutathione-dependent formaldehyde dehydrogenases (FDHs) are members of the zinc-dependent/medium chain alcohol dehydrogenase family. Formaldehyde dehydrogenase (FDH) is a member of the zinc-dependent/medium chain alcohol dehydrogenase family. FDH converts formaldehyde and NAD to formate and NADH. The initial step in this process the spontaneous formation of a S-(hydroxymethyl)glutathione adduct from formaldehyde and glutathione, followed by FDH-mediated oxidation (and detoxification) of the adduct to S-formylglutathione. These tetrameric FDHs have a catalytic zinc that resides between the catalytic and NAD(H)binding domains and a structural zinc in a lobe of the catalytic domain. The medium chain alcohol dehydrogenase family (MDR) has a NAD(P)(H)-binding domain in a Rossmann fold of a beta-alpha form. The N-terminal region typically has an all-beta catalytic domain. These proteins typical

>cd05278 FDH_like Formaldehyde dehydrogenases

Probab=100.00  E-value=4.3e-41  Score=309.57  Aligned_cols=338  Identities=31%  Similarity=0.504  Sum_probs=277.3

Q ss_pred             ceeEEEecCCceEEEEecCCCC-CCCcEEEEEeeeeeCcccHhhhhccccCCccCCCCcccCccceEEEEEeCCCCCCCC
Q 017868           18 NMAAWLLGVNTLKIQPFELPSL-GPYDVLVRMKAVGICGSDVHYLKTLRCADFVVKEPMVIGHECAGVIEKVGSEVKTLV   96 (365)
Q Consensus        18 ~~~~~~~~~~~l~~~~~~~p~~-~~~eVlI~v~~~~l~~~D~~~~~g~~~~~~~~~~p~~~G~e~~G~V~~vG~~v~~~~   96 (365)
                      |+++++.+++.+++.+.|.|.+ .++||+|||.++++|+.|+....|....   ..+|.++|+|++|+|+++|+++++++
T Consensus         1 ~ka~~~~~~~~~~~~~~~~p~~~~~~~v~i~v~~~~i~~~d~~~~~g~~~~---~~~~~~~g~e~~G~V~~vG~~v~~~~   77 (347)
T cd05278           1 MKALVYLGPGKIGLEEVPDPKIQGPHDAIVRVTATSICGSDLHIYRGGVPG---AKHGMILGHEFVGEVVEVGSDVKRLK   77 (347)
T ss_pred             CceEEEecCCceEEEEcCCCCCCCCCeEEEEEEEEEechhhHHHHcCCCCC---CCCCceeccceEEEEEEECCCccccC
Confidence            4788888888999999999999 9999999999999999999888775432   35578999999999999999999999


Q ss_pred             CCCEEEEcCCcCCCCCccccCCCCCCCCCcccccc--CCCCcceeeEEeecCC--ceEECCCCCCcchhccch-hhHHHH
Q 017868           97 PGDRVALEPGISCWRCDHCKGGRYNLCPEMKFFAT--PPVHGSLANQVVHPAD--LCFKLPDNVSLEEGAMCE-PLSVGL  171 (365)
Q Consensus        97 ~Gd~V~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~--~~~~g~~~~~~~v~~~--~~~~iP~~~~~~~a~~~~-~~~~a~  171 (365)
                      +||+|++.+..+|++|.+|+.+...+|++...+..  ....|+|++|++++++  +++++|+++++++++.++ .+.+||
T Consensus        78 ~Gd~V~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~v~~~~~~~~~lP~~~~~~~aa~l~~~~~ta~  157 (347)
T cd05278          78 PGDRVSVPCITFCGRCRFCRRGYHAHCENGLWGWKLGNRIDGGQAEYVRVPYADMNLAKIPDGLPDEDALMLSDILPTGF  157 (347)
T ss_pred             CCCEEEecCCCCCCCChhHhCcCcccCcCCCcccccccCCCCeeeEEEEecchhCeEEECCCCCCHHHHhhhcchhhhee
Confidence            99999999999999999999999999988664421  1246999999999987  899999999999998886 788999


Q ss_pred             HHHHhcCCCCCCEEEEEcCCHHHHHHHHHHHHHCCCCeEEEEeCChhHHHHHHHcCCCEEEeCCCCcccHHHHHHHHHHH
Q 017868          172 HACRRANIGPETNVLIMGAGPIGLVTMLGAPRAFGAPRIVIVDVDDYRLSVAKEIGADNIVKVSTNLQDIAEEVEKIQKA  251 (365)
Q Consensus       172 ~~~~~~~~~~g~~vlI~G~g~~G~~ai~~l~~~~g~~~vi~v~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~i~~~~~~  251 (365)
                      +++...+++++++|||.|+|.+|++++| +++..|+.+++++++++++.++++++|++.++++.+  .++.+.+++..  
T Consensus       158 ~~~~~~~~~~~~~VlI~g~g~vg~~~iq-lak~~g~~~v~~~~~~~~~~~~~~~~g~~~vi~~~~--~~~~~~i~~~~--  232 (347)
T cd05278         158 HGAELAGIKPGSTVAVIGAGPVGLCAVA-GARLLGAARIIAVDSNPERLDLAKEAGATDIINPKN--GDIVEQILELT--  232 (347)
T ss_pred             ehhhhcCCCCCCEEEEECCCHHHHHHHH-HHHHcCCCEEEEEeCCHHHHHHHHHhCCcEEEcCCc--chHHHHHHHHc--
Confidence            9887788999999999888999999999 899999756888888889999999999888777543  45666666543  


Q ss_pred             hCCCceEEEeCCCCHHHHHHHHHhcccCCEEEEEccCCCCccc-cchHhhhcCcEEEeeccc-CCcHHHHHHHHHcCCCC
Q 017868          252 MGTGIDVSFDCAGLNKTMSTALGATCAGGKVCLVGMGHHEMTV-PLTPAAVREVDVVGVFRY-KNTWPLCLELLRSGKID  329 (365)
Q Consensus       252 ~~~~~d~vid~~g~~~~~~~~~~~l~~~G~~~~~g~~~~~~~~-~~~~~~~~~~~i~~~~~~-~~~~~~~~~~l~~g~~~  329 (365)
                      .+.++|++||++|....+...+++|+++|+++.+|........ .......+++.+.+.... .+.+++++++++++.+.
T Consensus       233 ~~~~~d~vld~~g~~~~~~~~~~~l~~~G~~v~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~  312 (347)
T cd05278         233 GGRGVDCVIEAVGFEETFEQAVKVVRPGGTIANVGVYGKPDPLPLLGEWFGKNLTFKTGLVPVRARMPELLDLIEEGKID  312 (347)
T ss_pred             CCCCCcEEEEccCCHHHHHHHHHHhhcCCEEEEEcCCCCCcccCccchhhhceeEEEeeccCchhHHHHHHHHHHcCCCC
Confidence            2578999999999756888999999999999998754332211 111223566666665433 46788999999999985


Q ss_pred             CCCceEEEecCChhhHHHHHHHHhcCCC-ceEEEEeC
Q 017868          330 VKPLVTHRFGFSQKEVEEAFETSARGGT-AIKVMFNL  365 (365)
Q Consensus       330 ~~~~~~~~~~~~~~~~~~a~~~~~~~~~-~gk~vi~~  365 (365)
                      +.+.....|++  +++.+|++.+..+.. .+|+|++.
T Consensus       313 ~~~~~~~~~~~--~~~~~a~~~~~~~~~~~~~~vv~~  347 (347)
T cd05278         313 PSKLITHRFPL--DDILKAYRLFDNKPDGCIKVVIRP  347 (347)
T ss_pred             hhHcEEEEecH--HHHHHHHHHHhcCCCCceEEEecC
Confidence            43345677777  999999999888766 78999863

Formaldehyde dehydrogenase (FDH) is a member of the zinc-dependent/medium chain alcohol dehydrogenase family. Formaldehyde dehydrogenase (aka ADH3) may be the ancestral form of alcohol dehydrogenase, which evolved to detoxify formaldehyde. This CD contains glutathione dependant FDH, glutathione independent FDH, and related alcohol dehydrogenases. FDH converts formaldehyde and NAD(P) to formate and NAD(P)H. The initial step in this process the spontaneous formation of a S-(hydroxymethyl)glutathione adduct from formaldehyde and glutathione, followed by FDH-mediated oxidation (and detoxification) of the adduct to S-formylglutathione. Unlike typical FDH, Pseudomonas putida aldehyde-dismutating FDH (PFDH) is glutathione-independent. The medium chain alcohol dehydrogenase family (MDR) have a NAD(P)(H)-binding domain in a Rossmann fold of a beta-alpha form. The N-terminal region typically has an all-beta catalytic domain. These proteins typicall

>cd08286 FDH_like_ADH2 formaldehyde dehydrogenase (FDH)-like

Probab=100.00  E-value=9.2e-41  Score=307.05  Aligned_cols=338  Identities=32%  Similarity=0.541  Sum_probs=280.4

Q ss_pred             ceeEEEecCCceEEEEecCCCC-CCCcEEEEEeeeeeCcccHhhhhccccCCccCCCCcccCccceEEEEEeCCCCCCCC
Q 017868           18 NMAAWLLGVNTLKIQPFELPSL-GPYDVLVRMKAVGICGSDVHYLKTLRCADFVVKEPMVIGHECAGVIEKVGSEVKTLV   96 (365)
Q Consensus        18 ~~~~~~~~~~~l~~~~~~~p~~-~~~eVlI~v~~~~l~~~D~~~~~g~~~~~~~~~~p~~~G~e~~G~V~~vG~~v~~~~   96 (365)
                      |+++++.+++.+++.+.+.|+| .++||+|||.++++|+.|+..+.|.+..   ..+|.++|||++|+|+++|++++.++
T Consensus         1 m~a~~~~~~~~~~~~~~~~p~~~~~~ev~v~v~a~~i~~~d~~~~~g~~~~---~~~~~~~g~e~~G~V~~~G~~v~~~~   77 (345)
T cd08286           1 MKALVYHGPGKISWEDRPKPTIQEPTDAIVKMLKTTICGTDLHILKGDVPT---VTPGRILGHEGVGVVEEVGSAVTNFK   77 (345)
T ss_pred             CceEEEecCCceeEEecCCCCCCCCCeEEEEEEEeeecchhhHHHcCCCCC---CCCCceecccceEEEEEeccCccccC
Confidence            5788888888899999999996 8999999999999999999988875422   23478999999999999999999999


Q ss_pred             CCCEEEEcCCcCCCCCccccCCCCCCCCCccccccCCCCcceeeEEeecCC--ceEECCCCCCcchhccch-hhHHHHHH
Q 017868           97 PGDRVALEPGISCWRCDHCKGGRYNLCPEMKFFATPPVHGSLANQVVHPAD--LCFKLPDNVSLEEGAMCE-PLSVGLHA  173 (365)
Q Consensus        97 ~Gd~V~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~v~~~--~~~~iP~~~~~~~a~~~~-~~~~a~~~  173 (365)
                      +||+|++.+...|++|.+|..+..+.|....+......+|+|++|+.++.+  .++++|+++++.+++.+. .+.+||++
T Consensus        78 ~Gd~V~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~v~~~~~~~~~lp~~~~~~~aa~l~~~~~ta~~~  157 (345)
T cd08286          78 VGDRVLISCISSCGTCGYCRKGLYSHCESGGWILGNLIDGTQAEYVRIPHADNSLYKLPEGVDEEAAVMLSDILPTGYEC  157 (345)
T ss_pred             CCCEEEECCcCCCCCChHHHCcCcccCCCcccccccccCCeeeeEEEcccccCceEECCCCCCHHHhhhccchhHHHHHH
Confidence            999999999899999999999988888877664333456999999999987  899999999999888775 77888886


Q ss_pred             H-HhcCCCCCCEEEEEcCCHHHHHHHHHHHHHCCCCeEEEEeCChhHHHHHHHcCCCEEEeCCCCcccHHHHHHHHHHHh
Q 017868          174 C-RRANIGPETNVLIMGAGPIGLVTMLGAPRAFGAPRIVIVDVDDYRLSVAKEIGADNIVKVSTNLQDIAEEVEKIQKAM  252 (365)
Q Consensus       174 ~-~~~~~~~g~~vlI~G~g~~G~~ai~~l~~~~g~~~vi~v~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~i~~~~~~~  252 (365)
                      + +..++.+++++||+|+|.+|++++| +++.+|+.+++++++++++.++++++|++.++++..  .++...+.++..  
T Consensus       158 ~~~~~~~~~g~~vlI~g~g~~g~~~~~-~a~~~G~~~v~~~~~~~~~~~~~~~~g~~~~v~~~~--~~~~~~i~~~~~--  232 (345)
T cd08286         158 GVLNGKVKPGDTVAIVGAGPVGLAALL-TAQLYSPSKIIMVDLDDNRLEVAKKLGATHTVNSAK--GDAIEQVLELTD--  232 (345)
T ss_pred             HHhhcCCCCCCEEEEECCCHHHHHHHH-HHHHcCCCeEEEEcCCHHHHHHHHHhCCCceecccc--ccHHHHHHHHhC--
Confidence            5 5678999999999988999999999 999999546788888899999999999988777543  456566655532  


Q ss_pred             CCCceEEEeCCCCHHHHHHHHHhcccCCEEEEEccCCCCccccchHhhhcCcEEEeecccCCcHHHHHHHHHcCCCCCCC
Q 017868          253 GTGIDVSFDCAGLNKTMSTALGATCAGGKVCLVGMGHHEMTVPLTPAAVREVDVVGVFRYKNTWPLCLELLRSGKIDVKP  332 (365)
Q Consensus       253 ~~~~d~vid~~g~~~~~~~~~~~l~~~G~~~~~g~~~~~~~~~~~~~~~~~~~i~~~~~~~~~~~~~~~~l~~g~~~~~~  332 (365)
                      +.++|++||++|....+..+++.|+++|+++.+|.......++...+..+++++.+.......+.+++++++++.+...+
T Consensus       233 ~~~~d~vld~~g~~~~~~~~~~~l~~~g~~v~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~  312 (345)
T cd08286         233 GRGVDVVIEAVGIPATFELCQELVAPGGHIANVGVHGKPVDLHLEKLWIKNITITTGLVDTNTTPMLLKLVSSGKLDPSK  312 (345)
T ss_pred             CCCCCEEEECCCCHHHHHHHHHhccCCcEEEEecccCCCCCcCHHHHhhcCcEEEeecCchhhHHHHHHHHHcCCCChHH
Confidence            56899999999987788899999999999999986543344444445668888887544446788899999999986555


Q ss_pred             ceEEEecCChhhHHHHHHHHhcCC--CceEEEEeC
Q 017868          333 LVTHRFGFSQKEVEEAFETSARGG--TAIKVMFNL  365 (365)
Q Consensus       333 ~~~~~~~~~~~~~~~a~~~~~~~~--~~gk~vi~~  365 (365)
                      .++++|++  +++++|++.+....  ...|++|++
T Consensus       313 ~~~~~~~l--~~~~~a~~~~~~~~~~~~~k~~~~~  345 (345)
T cd08286         313 LVTHRFKL--SEIEKAYDTFSAAAKHKALKVIIDF  345 (345)
T ss_pred             cEEeEeeH--HHHHHHHHHHhccCCCCeeEEEEeC
Confidence            56788888  99999999988753  456999874

This group is related to formaldehyde dehydrogenase (FDH), which is a member of the zinc-dependent/medium chain alcohol dehydrogenase family. This family uses NAD(H) as a cofactor in the interconversion of alcohols and aldehydes, or ketones. Another member is identified as a dihydroxyacetone reductase. Like the zinc-dependent alcohol dehydrogenases (ADH) of the medium chain alcohol dehydrogenase/reductase family (MDR), tetrameric FDHs have a catalytic zinc that resides between the catalytic and NAD(H)binding domains and a structural zinc in a lobe of the catalytic domain. Unlike ADH, where NAD(P)(H) acts as a cofactor, NADH in FDH is a tightly bound redox cofactor (similar to nicotinamide proteins). The medium chain alcohol dehydrogenase family (MDR) has a NAD(P)(H)-binding domain in a Rossmann fold of a beta-alpha form. The N-terminal region typically has an all-beta catalytic domain. These proteins typically form dimers (

>cd08278 benzyl_alcohol_DH Benzyl alcohol dehydrogenase

Probab=100.00  E-value=6.5e-41  Score=309.76  Aligned_cols=334  Identities=29%  Similarity=0.449  Sum_probs=273.4

Q ss_pred             hcceeEEEecC-CceEEEEecCCCCCCCcEEEEEeeeeeCcccHhhhhccccCCccCCCCcccCccceEEEEEeCCCCCC
Q 017868           16 EVNMAAWLLGV-NTLKIQPFELPSLGPYDVLVRMKAVGICGSDVHYLKTLRCADFVVKEPMVIGHECAGVIEKVGSEVKT   94 (365)
Q Consensus        16 ~~~~~~~~~~~-~~l~~~~~~~p~~~~~eVlI~v~~~~l~~~D~~~~~g~~~~~~~~~~p~~~G~e~~G~V~~vG~~v~~   94 (365)
                      ++|+|+++.++ +.+++++.+.|.+.++||+|||.++++|+.|+....|.+.    ...|.++|+|++|+|+++|+++++
T Consensus         1 ~~~~a~~~~~~~~~~~~~~~~~p~~~~~~v~Vkv~a~gi~~~d~~~~~g~~~----~~~p~v~G~e~~G~V~~vG~~v~~   76 (365)
T cd08278           1 MKTTAAVVREPGGPFVLEDVELDDPRPDEVLVRIVATGICHTDLVVRDGGLP----TPLPAVLGHEGAGVVEAVGSAVTG   76 (365)
T ss_pred             CccEEeeeccCCCcceEEEeecCCCCCCeEEEEEEEeecCcccHHHhcCCCC----CCCCcccccceeEEEEEeCCCccc
Confidence            36889999874 6889999999999999999999999999999998876432    345789999999999999999999


Q ss_pred             CCCCCEEEEcCCcCCCCCccccCCCCCCCCCcccccc----------------------CCCCcceeeEEeecCCceEEC
Q 017868           95 LVPGDRVALEPGISCWRCDHCKGGRYNLCPEMKFFAT----------------------PPVHGSLANQVVHPADLCFKL  152 (365)
Q Consensus        95 ~~~Gd~V~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~----------------------~~~~g~~~~~~~v~~~~~~~i  152 (365)
                      |++||+|++.+. .|++|.+|+.++.++|.+......                      ....|+|++|+.+++.+++++
T Consensus        77 ~~~Gd~V~~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~y~~v~~~~~~~i  155 (365)
T cd08278          77 LKPGDHVVLSFA-SCGECANCLSGHPAYCENFFPLNFSGRRPDGSTPLSLDDGTPVHGHFFGQSSFATYAVVHERNVVKV  155 (365)
T ss_pred             CCCCCEEEEccc-CCCCChHHhCCCcccccCcccccccccccCCcccccccCCcccccccccccceeeEEEecchhEEEC
Confidence            999999999764 899999999999999986532210                      012489999999999999999


Q ss_pred             CCCCCcchhccch-hhHHHHHHH-HhcCCCCCCEEEEEcCCHHHHHHHHHHHHHCCCCeEEEEeCChhHHHHHHHcCCCE
Q 017868          153 PDNVSLEEGAMCE-PLSVGLHAC-RRANIGPETNVLIMGAGPIGLVTMLGAPRAFGAPRIVIVDVDDYRLSVAKEIGADN  230 (365)
Q Consensus       153 P~~~~~~~a~~~~-~~~~a~~~~-~~~~~~~g~~vlI~G~g~~G~~ai~~l~~~~g~~~vi~v~~~~~~~~~~~~~g~~~  230 (365)
                      |+++++++++.++ .+.+|+.++ +...++++++|||+|+|++|+++++ +++..|++++++++++++|.++++++|++.
T Consensus       156 P~~~s~~~a~~l~~~~~ta~~~~~~~~~~~~g~~vlI~g~g~vG~~~~~-la~~~G~~~v~~~~~~~~k~~~~~~~g~~~  234 (365)
T cd08278         156 DKDVPLELLAPLGCGIQTGAGAVLNVLKPRPGSSIAVFGAGAVGLAAVM-AAKIAGCTTIIAVDIVDSRLELAKELGATH  234 (365)
T ss_pred             CCCCCHHHhhhhcchhhhhhHHHhhhcCCCCCCEEEEECCCHHHHHHHH-HHHHcCCCeEEEEeCCHHHHHHHHHcCCcE
Confidence            9999999888776 777888876 5678899999999988999999999 999999988999999999999999999988


Q ss_pred             EEeCCCCcccHHHHHHHHHHHhCCCceEEEeCCCCHHHHHHHHHhcccCCEEEEEccCC--CCccccchHhhhcCcEEEe
Q 017868          231 IVKVSTNLQDIAEEVEKIQKAMGTGIDVSFDCAGLNKTMSTALGATCAGGKVCLVGMGH--HEMTVPLTPAAVREVDVVG  308 (365)
Q Consensus       231 ~~~~~~~~~~~~~~i~~~~~~~~~~~d~vid~~g~~~~~~~~~~~l~~~G~~~~~g~~~--~~~~~~~~~~~~~~~~i~~  308 (365)
                      ++++..  .++.+.+++..   +.++|+++||+|....+..++++++++|+++.+|...  ....++...+..++.++.+
T Consensus       235 ~i~~~~--~~~~~~v~~~~---~~~~d~vld~~g~~~~~~~~~~~l~~~G~~v~~g~~~~~~~~~~~~~~~~~~~~~~~~  309 (365)
T cd08278         235 VINPKE--EDLVAAIREIT---GGGVDYALDTTGVPAVIEQAVDALAPRGTLALVGAPPPGAEVTLDVNDLLVSGKTIRG  309 (365)
T ss_pred             EecCCC--cCHHHHHHHHh---CCCCcEEEECCCCcHHHHHHHHHhccCCEEEEeCcCCCCCccccCHHHHhhcCceEEE
Confidence            776533  46666666543   5689999999997678899999999999999998542  2233444445567888877


Q ss_pred             eccc----CCcHHHHHHHHHcCCCCCCCceEEEecCChhhHHHHHHHHhcCCCceEEEEe
Q 017868          309 VFRY----KNTWPLCLELLRSGKIDVKPLVTHRFGFSQKEVEEAFETSARGGTAIKVMFN  364 (365)
Q Consensus       309 ~~~~----~~~~~~~~~~l~~g~~~~~~~~~~~~~~~~~~~~~a~~~~~~~~~~gk~vi~  364 (365)
                      +...    .+.+.+++++++++.+.+. ...+.|++  +++.+|++.++++.. .|+||+
T Consensus       310 ~~~~~~~~~~~~~~~~~~l~~g~l~~~-~~~~~~~l--~~~~~a~~~~~~~~~-~k~~~~  365 (365)
T cd08278         310 VIEGDSVPQEFIPRLIELYRQGKFPFD-KLVTFYPF--EDINQAIADSESGKV-IKPVLR  365 (365)
T ss_pred             eecCCcChHHHHHHHHHHHHcCCCChH-HheEEecH--HHHHHHHHHHHCCCc-eEEEEC
Confidence            6432    3467889999999988432 23356777  999999999988754 588874

Benzyl alcohol dehydrogenase is similar to liver alcohol dehydrogenase, but has some amino acid substitutions near the active site, which may determine the enzyme's specificity of oxidizing aromatic substrates. Also known as aryl-alcohol dehydrogenases, they catalyze the conversion of an aromatic alcohol + NAD+ to an aromatic aldehyde + NADH + H+. NAD(P)(H)-dependent oxidoreductases are the major enzymes in the interconversion of alcohols and aldehydes, or ketones. Alcohol dehydrogenase in the liver converts ethanol and NAD+ to acetaldehyde and NADH, while in yeast and some other microorganisms ADH catalyzes the conversion acetaldehyde to ethanol in alcoholic fermentation. ADH is a member of the medium chain alcohol dehydrogenase family (MDR), which has a NAD(P)(H)-binding domain in a Rossmann fold of a beta-alpha form. The NAD(H)-binding region is comprised of 2 structurally similar halves, each of which contacts a mononu

>cd08242 MDR_like Medium chain dehydrogenases/reductase (MDR)/zinc-dependent alcohol dehydrogenase-like family

Probab=100.00  E-value=8.2e-41  Score=304.10  Aligned_cols=319  Identities=30%  Similarity=0.474  Sum_probs=269.2

Q ss_pred             ceeEEEecCCceEEEEecCCCCCCCcEEEEEeeeeeCcccHhhhhccccCCccCCCCcccCccceEEEEEeCCCCCCCCC
Q 017868           18 NMAAWLLGVNTLKIQPFELPSLGPYDVLVRMKAVGICGSDVHYLKTLRCADFVVKEPMVIGHECAGVIEKVGSEVKTLVP   97 (365)
Q Consensus        18 ~~~~~~~~~~~l~~~~~~~p~~~~~eVlI~v~~~~l~~~D~~~~~g~~~~~~~~~~p~~~G~e~~G~V~~vG~~v~~~~~   97 (365)
                      |+++++.+++++++++++.|+++++||+|||.++++|+.|.....|.+      ..|.++|+|++|+|+++|++   +++
T Consensus         1 ~~a~~~~~~~~~~~~~~~~p~~~~~~vlV~v~a~~i~~~d~~~~~g~~------~~~~~~G~e~~G~Vv~~G~~---~~~   71 (319)
T cd08242           1 MKALVLDGGLDLRVEDLPKPEPPPGEALVRVLLAGICNTDLEIYKGYY------PFPGVPGHEFVGIVEEGPEA---ELV   71 (319)
T ss_pred             CeeEEEeCCCcEEEEECCCCCCCCCeEEEEEEEEEEccccHHHHcCCC------CCCCccCceEEEEEEEeCCC---CCC
Confidence            578888888899999999999999999999999999999998887642      25778999999999999998   679


Q ss_pred             CCEEEEcCCcCCCCCccccCCCCCCCCCccccccCCCCcceeeEEeecCCceEECCCCCCcchhccchhhHHHHHHHHhc
Q 017868           98 GDRVALEPGISCWRCDHCKGGRYNLCPEMKFFATPPVHGSLANQVVHPADLCFKLPDNVSLEEGAMCEPLSVGLHACRRA  177 (365)
Q Consensus        98 Gd~V~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~v~~~~~~~iP~~~~~~~a~~~~~~~~a~~~~~~~  177 (365)
                      ||||...+..+|++|.+|+.+.+++|++....+....+|+|++|+.+++++++++|+++++++++.+.++.+++.+++..
T Consensus        72 G~~V~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~v~~~~~~~lP~~~~~~~aa~~~~~~~~~~~~~~~  151 (319)
T cd08242          72 GKRVVGEINIACGRCEYCRRGLYTHCPNRTVLGIVDRDGAFAEYLTLPLENLHVVPDLVPDEQAVFAEPLAAALEILEQV  151 (319)
T ss_pred             CCeEEECCCcCCCCChhhhCcCcccCCCCcccCccCCCCceEEEEEechHHeEECcCCCCHHHhhhhhHHHHHHHHHHhc
Confidence            99999999999999999999999999987666543357999999999999999999999998888655556677767788


Q ss_pred             CCCCCCEEEEEcCCHHHHHHHHHHHHHCCCCeEEEEeCChhHHHHHHHcCCCEEEeCCCCcccHHHHHHHHHHHhCCCce
Q 017868          178 NIGPETNVLIMGAGPIGLVTMLGAPRAFGAPRIVIVDVDDYRLSVAKEIGADNIVKVSTNLQDIAEEVEKIQKAMGTGID  257 (365)
Q Consensus       178 ~~~~g~~vlI~G~g~~G~~ai~~l~~~~g~~~vi~v~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~i~~~~~~~~~~~d  257 (365)
                      +++++++|||+|+|.+|++++| +++.+|++ +++++.++++.++++++|++.++++...             ..+.++|
T Consensus       152 ~~~~g~~vlV~g~g~vg~~~~q-~a~~~G~~-vi~~~~~~~~~~~~~~~g~~~~~~~~~~-------------~~~~~~d  216 (319)
T cd08242         152 PITPGDKVAVLGDGKLGLLIAQ-VLALTGPD-VVLVGRHSEKLALARRLGVETVLPDEAE-------------SEGGGFD  216 (319)
T ss_pred             CCCCCCEEEEECCCHHHHHHHH-HHHHcCCe-EEEEcCCHHHHHHHHHcCCcEEeCcccc-------------ccCCCCC
Confidence            8999999999988999999999 99999996 7788888999999999999877664210             1257899


Q ss_pred             EEEeCCCCHHHHHHHHHhcccCCEEEEEccCCCCccccchHhhhcCcEEEeecccCCcHHHHHHHHHcCCCCCCCceEEE
Q 017868          258 VSFDCAGLNKTMSTALGATCAGGKVCLVGMGHHEMTVPLTPAAVREVDVVGVFRYKNTWPLCLELLRSGKIDVKPLVTHR  337 (365)
Q Consensus       258 ~vid~~g~~~~~~~~~~~l~~~G~~~~~g~~~~~~~~~~~~~~~~~~~i~~~~~~~~~~~~~~~~l~~g~~~~~~~~~~~  337 (365)
                      +++|++|....+...++++.++|+++..+.......+....+..++.++.+....  .+++++++++++.+++.+.+++.
T Consensus       217 ~vid~~g~~~~~~~~~~~l~~~g~~v~~~~~~~~~~~~~~~~~~~~~~i~~~~~~--~~~~~~~~~~~~~l~~~~~~~~~  294 (319)
T cd08242         217 VVVEATGSPSGLELALRLVRPRGTVVLKSTYAGPASFDLTKAVVNEITLVGSRCG--PFAPALRLLRKGLVDVDPLITAV  294 (319)
T ss_pred             EEEECCCChHHHHHHHHHhhcCCEEEEEcccCCCCccCHHHheecceEEEEEecc--cHHHHHHHHHcCCCChhhceEEE
Confidence            9999999866888999999999999987654333344444566788888876432  38899999999999666668899


Q ss_pred             ecCChhhHHHHHHHHhcCCCceEEEEeC
Q 017868          338 FGFSQKEVEEAFETSARGGTAIKVMFNL  365 (365)
Q Consensus       338 ~~~~~~~~~~a~~~~~~~~~~gk~vi~~  365 (365)
                      |++  +++++|++.++++. .+|+||+.
T Consensus       295 ~~l--~~~~~a~~~~~~~~-~~k~vi~~  319 (319)
T cd08242         295 YPL--EEALEAFERAAEPG-ALKVLLRP  319 (319)
T ss_pred             EeH--HHHHHHHHHHhcCC-ceEEEeCC
Confidence            998  99999999998765 58999863

This group contains members identified as related to zinc-dependent alcohol dehydrogenase and other members of the MDR family, including threonine dehydrogenase. The medium chain dehydrogenases/reductase (MDR)/zinc-dependent alcohol dehydrogenase-like family, which contains the zinc-dependent alcohol dehydrogenase (ADH-Zn) and related proteins, is a diverse group of proteins related to the first identified member, class I mammalian ADH. MDRs display a broad range of activities and are distinguished from the smaller short chain dehydrogenases (~ 250 amino acids vs. the ~ 350 amino acids of the MDR). The MDR proteins have 2 domains: a C-terminal NAD(P) binding-Rossmann fold domain of a beta-alpha form and an N-terminal catalytic domain with distant homology to GroES. The MDR group includes various activities, including the founding alcohol dehydrogenase (ADH), quinone reducta

>cd08262 Zn_ADH8 Alcohol dehydrogenases of the MDR family

Probab=100.00  E-value=9.8e-41  Score=306.41  Aligned_cols=329  Identities=30%  Similarity=0.469  Sum_probs=265.7

Q ss_pred             ceeEEEecCCceEEEEecCCCCCCCcEEEEEeeeeeCcccHhhhhccccC--------CccCCCCcccCccceEEEEEeC
Q 017868           18 NMAAWLLGVNTLKIQPFELPSLGPYDVLVRMKAVGICGSDVHYLKTLRCA--------DFVVKEPMVIGHECAGVIEKVG   89 (365)
Q Consensus        18 ~~~~~~~~~~~l~~~~~~~p~~~~~eVlI~v~~~~l~~~D~~~~~g~~~~--------~~~~~~p~~~G~e~~G~V~~vG   89 (365)
                      ||++++.++ .+++++++.|++.++||+|||.++++|+.|+....|....        .....+|.++|+|++|+|+++|
T Consensus         1 m~a~~~~~~-~~~~~~~~~p~~~~~~v~V~v~~~~~~~~d~~~~~g~~~~~~~~~~~~~~~~~~~~~~g~e~~G~V~~vG   79 (341)
T cd08262           1 MRAAVFRDG-PLVVRDVPDPEPGPGQVLVKVLACGICGSDLHATAHPEAMVDDAGGPSLMDLGADIVLGHEFCGEVVDYG   79 (341)
T ss_pred             CceEEEeCC-ceEEEecCCCCCCCCeEEEEEEEEEEcccchHHHcCCCcccccccccccccCCCCcccccceeEEEEEeC
Confidence            578888776 8999999999999999999999999999999988773210        0112357789999999999999


Q ss_pred             CCCCC-CCCCCEEEEcCCcCCCCCccccCCCCCCCCCccccccCCCCcceeeEEeecCCceEECCCCCCcchhccchhhH
Q 017868           90 SEVKT-LVPGDRVALEPGISCWRCDHCKGGRYNLCPEMKFFATPPVHGSLANQVVHPADLCFKLPDNVSLEEGAMCEPLS  168 (365)
Q Consensus        90 ~~v~~-~~~Gd~V~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~v~~~~~~~iP~~~~~~~a~~~~~~~  168 (365)
                      +++++ |++||+|++++..+|+.|+.|..+..           ....|+|+||+.++.+.++++|+++++++++...++.
T Consensus        80 ~~v~~~~~~Gd~V~~~~~~~~~~~~~~~~~~~-----------~~~~g~~~~~~~v~~~~~~~lP~~~s~~~a~~~~~~~  148 (341)
T cd08262          80 PGTERKLKVGTRVTSLPLLLCGQGASCGIGLS-----------PEAPGGYAEYMLLSEALLLRVPDGLSMEDAALTEPLA  148 (341)
T ss_pred             CCCcCCCCCCCEEEecCCcCCCCChhhhCCCC-----------cCCCCceeeeEEechHHeEECCCCCCHHHhhhhhhHH
Confidence            99997 99999999999999999999943211           1246999999999999999999999999888556788


Q ss_pred             HHHHHHHhcCCCCCCEEEEEcCCHHHHHHHHHHHHHCCCCeEEEEeCChhHHHHHHHcCCCEEEeCCCCcc--cHHHHHH
Q 017868          169 VGLHACRRANIGPETNVLIMGAGPIGLVTMLGAPRAFGAPRIVIVDVDDYRLSVAKEIGADNIVKVSTNLQ--DIAEEVE  246 (365)
Q Consensus       169 ~a~~~~~~~~~~~g~~vlI~G~g~~G~~ai~~l~~~~g~~~vi~v~~~~~~~~~~~~~g~~~~~~~~~~~~--~~~~~i~  246 (365)
                      +||+++..+++++|++|||+|+|++|++++| +++.+|++.++++++++++.++++++|++.+++++....  .+. .+.
T Consensus       149 ~a~~~~~~~~~~~g~~VlI~g~g~vg~~~~~-la~~~G~~~v~~~~~~~~~~~~~~~~g~~~~i~~~~~~~~~~~~-~~~  226 (341)
T cd08262         149 VGLHAVRRARLTPGEVALVIGCGPIGLAVIA-ALKARGVGPIVASDFSPERRALALAMGADIVVDPAADSPFAAWA-AEL  226 (341)
T ss_pred             HHHHHHHhcCCCCCCEEEEECCCHHHHHHHH-HHHHcCCcEEEEECCCHHHHHHHHHcCCcEEEcCCCcCHHHHHH-HHH
Confidence            8998887789999999999988999999999 999999988888888999999999999987777543211  121 222


Q ss_pred             HHHHHhCCCceEEEeCCCCHHHHHHHHHhcccCCEEEEEccCCCCccccchHhhhcCcEEEeeccc-CCcHHHHHHHHHc
Q 017868          247 KIQKAMGTGIDVSFDCAGLNKTMSTALGATCAGGKVCLVGMGHHEMTVPLTPAAVREVDVVGVFRY-KNTWPLCLELLRS  325 (365)
Q Consensus       247 ~~~~~~~~~~d~vid~~g~~~~~~~~~~~l~~~G~~~~~g~~~~~~~~~~~~~~~~~~~i~~~~~~-~~~~~~~~~~l~~  325 (365)
                      ..  ..+.++|++||++|....+..++++++++|+++.+|...............+++++.+.... .+.+.++++++++
T Consensus       227 ~~--~~~~~~d~vid~~g~~~~~~~~~~~l~~~g~~v~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~  304 (341)
T cd08262         227 AR--AGGPKPAVIFECVGAPGLIQQIIEGAPPGGRIVVVGVCMESDNIEPALAIRKELTLQFSLGYTPEEFADALDALAE  304 (341)
T ss_pred             HH--hCCCCCCEEEECCCCHHHHHHHHHHhccCCEEEEECCCCCCCccCHHHHhhcceEEEEEecccHHHHHHHHHHHHc
Confidence            22  23568999999999755778899999999999999865332222222234577777766544 4578899999999


Q ss_pred             CCCCCCCceEEEecCChhhHHHHHHHHhcCCCceEEEEe
Q 017868          326 GKIDVKPLVTHRFGFSQKEVEEAFETSARGGTAIKVMFN  364 (365)
Q Consensus       326 g~~~~~~~~~~~~~~~~~~~~~a~~~~~~~~~~gk~vi~  364 (365)
                      +.+.+.+.+.+.|++  +++++|++.++++...+|+|++
T Consensus       305 g~i~~~~~i~~~~~l--~~~~~a~~~~~~~~~~~kvvv~  341 (341)
T cd08262         305 GKVDVAPMVTGTVGL--DGVPDAFEALRDPEHHCKILVD  341 (341)
T ss_pred             CCCChHHheEEEeeH--HHHHHHHHHHhcCCCceEEEeC
Confidence            999655566788888  9999999999999999999975

The medium chain dehydrogenases/reductase (MDR)/zinc-dependent alcohol dehydrogenase-like family, which contains the zinc-dependent alcohol dehydrogenase (ADH-Zn) and related proteins, is a diverse group of proteins related to the first identified member, class I mammalian ADH. MDRs display a broad range of activities and are distinguished from the smaller short chain dehydrogenases (~ 250 amino acids vs. the ~ 350 amino acids of the MDR). The MDR proteins have 2 domains: a C-terminal NAD(P)-binding Rossmann fold domain of a beta-alpha form and an N-terminal catalytic domain with distant homology to GroES. The MDR group contains a host of activities, including the founding alcohol dehydrogenase (ADH), quinone reductase, sorbitol dehydrogenase, formaldehyde dehydrogenase, butanediol DH, ketose reductase, cinnamyl reductase, and numerous others. The zinc-dependent alcohol dehydrogenases (ADHs) catalyze the NAD(P)(H)-dependent i

>cd08265 Zn_ADH3 Alcohol dehydrogenases of the MDR family

Probab=100.00  E-value=1.2e-40  Score=309.88  Aligned_cols=335  Identities=30%  Similarity=0.524  Sum_probs=271.2

Q ss_pred             EEEecCCceEEEEecCCCCCCCcEEEEEeeeeeCcccHhhhhccccCC----ccCCCCcccCccceEEEEEeCCCCCCCC
Q 017868           21 AWLLGVNTLKIQPFELPSLGPYDVLVRMKAVGICGSDVHYLKTLRCAD----FVVKEPMVIGHECAGVIEKVGSEVKTLV   96 (365)
Q Consensus        21 ~~~~~~~~l~~~~~~~p~~~~~eVlI~v~~~~l~~~D~~~~~g~~~~~----~~~~~p~~~G~e~~G~V~~vG~~v~~~~   96 (365)
                      .++. ..++++.++|.|+++++||+|||.++++|++|+....+...+.    ....+|.++|||++|+|+++|+++++|+
T Consensus        32 ~~~~-~~~~~~~~~~~p~~~~~ev~V~v~a~gi~~~D~~~~~~~~~~~~~~~~~~~~~~~~g~e~~G~V~~vG~~v~~~~  110 (384)
T cd08265          32 KVWR-YPELRVEDVPVPNLKPDEILIRVKACGICGSDIHLYETDKDGYILYPGLTEFPVVIGHEFSGVVEKTGKNVKNFE  110 (384)
T ss_pred             EEEe-CCCEEEEECCCCCCCCCEEEEEEEEEEEcHhHHHHHcCCCCcccccCcccCCCcccccceEEEEEEECCCCCCCC
Confidence            3344 3579999999999999999999999999999998876321110    1134578999999999999999999999


Q ss_pred             CCCEEEEcCCcCCCCCccccCCCCCCCCCccccccCCCCcceeeEEeecCCceEECCCC-------CCcchhccchhhHH
Q 017868           97 PGDRVALEPGISCWRCDHCKGGRYNLCPEMKFFATPPVHGSLANQVVHPADLCFKLPDN-------VSLEEGAMCEPLSV  169 (365)
Q Consensus        97 ~Gd~V~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~v~~~~~~~iP~~-------~~~~~a~~~~~~~~  169 (365)
                      +||+|++.+..+|+.|++|+.+++++|......+. ...|+|++|+.++++.++++|++       ++++.|+...++++
T Consensus       111 ~Gd~V~~~~~~~~~~~~~c~~~~~~~~~~~~~~g~-~~~g~~~~~v~v~~~~~~~lP~~~~~~~~~~~~~~a~~~~~~~t  189 (384)
T cd08265         111 KGDPVTAEEMMWCGMCRACRSGSPNHCKNLKELGF-SADGAFAEYIAVNARYAWEINELREIYSEDKAFEAGALVEPTSV  189 (384)
T ss_pred             CCCEEEECCCCCCCCChhhhCcCcccCCCcceeee-cCCCcceeeEEechHHeEECCccccccccCCCHHHhhhhhHHHH
Confidence            99999999999999999999999999997765554 24699999999999999999986       45565555568889


Q ss_pred             HHHHH-Hh-cCCCCCCEEEEEcCCHHHHHHHHHHHHHCCCCeEEEEeCChhHHHHHHHcCCCEEEeCCCC-cccHHHHHH
Q 017868          170 GLHAC-RR-ANIGPETNVLIMGAGPIGLVTMLGAPRAFGAPRIVIVDVDDYRLSVAKEIGADNIVKVSTN-LQDIAEEVE  246 (365)
Q Consensus       170 a~~~~-~~-~~~~~g~~vlI~G~g~~G~~ai~~l~~~~g~~~vi~v~~~~~~~~~~~~~g~~~~~~~~~~-~~~~~~~i~  246 (365)
                      ||+++ .. +++++|++|||+|+|++|+++++ +++..|+.+++++++++++.++++++|++.++++.+. ..++.+.++
T Consensus       190 a~~al~~~~~~~~~g~~VlV~g~g~vG~~ai~-lA~~~G~~~vi~~~~~~~~~~~~~~~g~~~~v~~~~~~~~~~~~~v~  268 (384)
T cd08265         190 AYNGLFIRGGGFRPGAYVVVYGAGPIGLAAIA-LAKAAGASKVIAFEISEERRNLAKEMGADYVFNPTKMRDCLSGEKVM  268 (384)
T ss_pred             HHHHHHhhcCCCCCCCEEEEECCCHHHHHHHH-HHHHcCCCEEEEEcCCHHHHHHHHHcCCCEEEcccccccccHHHHHH
Confidence            99998 34 68999999999988999999999 9999999778888888899999999999888765432 236666676


Q ss_pred             HHHHHhCCCceEEEeCCCCH-HHHHHHHHhcccCCEEEEEccCCCCccccchHhhhcCcEEEeeccc--CCcHHHHHHHH
Q 017868          247 KIQKAMGTGIDVSFDCAGLN-KTMSTALGATCAGGKVCLVGMGHHEMTVPLTPAAVREVDVVGVFRY--KNTWPLCLELL  323 (365)
Q Consensus       247 ~~~~~~~~~~d~vid~~g~~-~~~~~~~~~l~~~G~~~~~g~~~~~~~~~~~~~~~~~~~i~~~~~~--~~~~~~~~~~l  323 (365)
                      ++..  +.++|+|+|++|.. ..+...+++|+++|+++.+|.......+....+..+..++.+....  ...+.++++++
T Consensus       269 ~~~~--g~gvDvvld~~g~~~~~~~~~~~~l~~~G~~v~~g~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~ll  346 (384)
T cd08265         269 EVTK--GWGADIQVEAAGAPPATIPQMEKSIAINGKIVYIGRAATTVPLHLEVLQVRRAQIVGAQGHSGHGIFPSVIKLM  346 (384)
T ss_pred             HhcC--CCCCCEEEECCCCcHHHHHHHHHHHHcCCEEEEECCCCCCCcccHHHHhhCceEEEEeeccCCcchHHHHHHHH
Confidence            6543  67899999999963 4678899999999999999854333333344566677788877542  45799999999


Q ss_pred             HcCCCCCCCceEEEecCChhhHHHHHHHHhcCCCceEEEE
Q 017868          324 RSGKIDVKPLVTHRFGFSQKEVEEAFETSARGGTAIKVMF  363 (365)
Q Consensus       324 ~~g~~~~~~~~~~~~~~~~~~~~~a~~~~~~~~~~gk~vi  363 (365)
                      +++.+.+....++.|++  +++.+|++...++ ..+|+|+
T Consensus       347 ~~g~l~~~~~~~~~~~~--~~~~~a~~~~~~~-~~~kvvv  383 (384)
T cd08265         347 ASGKIDMTKIITARFPL--EGIMEAIKAASER-TDGKITI  383 (384)
T ss_pred             HcCCCChHHheEEEeeH--HHHHHHHHHHhcC-CCceEEe
Confidence            99999544446788888  9999999996665 6788886

This group resembles the zinc-dependent alcohol dehydrogenase and has the catalytic and structural zinc-binding sites characteristic of this group. The medium chain dehydrogenases/reductase (MDR)/zinc-dependent alcohol dehydrogenase-like family, which contains the zinc-dependent alcohol dehydrogenase (ADH-Zn) and related proteins, is a diverse group of proteins related to the first identified member, class I mammalian ADH. MDRs display a broad range of activities and are distinguished from the smaller short chain dehydrogenases (~ 250 amino acids vs. the ~ 350 amino acids of the MDR). The MDR proteins have 2 domains: a C-terminal NAD(P) binding-Rossmann fold domain of a beta-alpha form and an N-terminal catalytic domain with distant homology to GroES. The MDR group contains a host of activities, including the founding alcohol dehydrogenase (ADH), quinone reductase, sorbitol dehydrogenase, formaldehyde dehydrogenase, butanedi

>cd08235 iditol_2_DH_like L-iditol 2-dehydrogenase

Probab=100.00  E-value=2.5e-40  Score=304.01  Aligned_cols=335  Identities=37%  Similarity=0.656  Sum_probs=281.3

Q ss_pred             ceeEEEecCCceEEEEecCCCCCCCcEEEEEeeeeeCcccHhhhhccccCCccCCCCcccCccceEEEEEeCCCCCCCCC
Q 017868           18 NMAAWLLGVNTLKIQPFELPSLGPYDVLVRMKAVGICGSDVHYLKTLRCADFVVKEPMVIGHECAGVIEKVGSEVKTLVP   97 (365)
Q Consensus        18 ~~~~~~~~~~~l~~~~~~~p~~~~~eVlI~v~~~~l~~~D~~~~~g~~~~~~~~~~p~~~G~e~~G~V~~vG~~v~~~~~   97 (365)
                      |+++++.+.+.+.+++.+.|++.+++|+|||.++++|+.|+....|...   +...|.++|+|++|+|+++|++++.|++
T Consensus         1 ~~~~~~~~~~~~~~~~~~~~~l~~~~v~i~v~~~~l~~~d~~~~~g~~~---~~~~~~~~g~~~~G~V~~~G~~v~~~~~   77 (343)
T cd08235           1 MKAAVLHGPNDVRLEEVPVPEPGPGEVLVKVRACGICGTDVKKIRGGHT---DLKPPRILGHEIAGEIVEVGDGVTGFKV   77 (343)
T ss_pred             CeEEEEecCCceEEEEccCCCCCCCeEEEEEEEeeeccccHHHHcCCCc---cCCCCcccccceEEEEEeeCCCCCCCCC
Confidence            5788888888899999999999999999999999999999998876432   1344678999999999999999999999


Q ss_pred             CCEEEEcCCcCCCCCccccCCCCCCCCCccccccCCCCcceeeEEeecCCc-----eEECCCCCCcchhccchhhHHHHH
Q 017868           98 GDRVALEPGISCWRCDHCKGGRYNLCPEMKFFATPPVHGSLANQVVHPADL-----CFKLPDNVSLEEGAMCEPLSVGLH  172 (365)
Q Consensus        98 Gd~V~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~v~~~~-----~~~iP~~~~~~~a~~~~~~~~a~~  172 (365)
                      ||+|++.++..|++|++|..++.++|+...+.+. ...|+|++|+.+++++     ++++|+++++.+|+.+.++.+|++
T Consensus        78 Gd~V~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~~~g~~~~~v~v~~~~~~~~~~~~lP~~~~~~~aa~~~~~~~a~~  156 (343)
T cd08235          78 GDRVFVAPHVPCGECHYCLRGNENMCPNYKKFGN-LYDGGFAEYVRVPAWAVKRGGVLKLPDNVSFEEAALVEPLACCIN  156 (343)
T ss_pred             CCEEEEccCCCCCCChHHHCcCcccCCCcceecc-CCCCcceeeEEecccccccccEEECCCCCCHHHHHhhhHHHHHHH
Confidence            9999999999999999999999999988765553 3569999999999998     999999999999887767888999


Q ss_pred             HHHhcCCCCCCEEEEEcCCHHHHHHHHHHHHHCCCCeEEEEeCChhHHHHHHHcCCCEEEeCCCCcccHHHHHHHHHHHh
Q 017868          173 ACRRANIGPETNVLIMGAGPIGLVTMLGAPRAFGAPRIVIVDVDDYRLSVAKEIGADNIVKVSTNLQDIAEEVEKIQKAM  252 (365)
Q Consensus       173 ~~~~~~~~~g~~vlI~G~g~~G~~ai~~l~~~~g~~~vi~v~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~i~~~~~~~  252 (365)
                      +++..++++|++|||+|+|.+|+++++ +++..|++.++++++++++.+.++++|++.+++++  ..++.+.+++...  
T Consensus       157 ~l~~~~~~~g~~VlV~g~g~vg~~~~~-la~~~g~~~v~~~~~s~~~~~~~~~~g~~~~~~~~--~~~~~~~i~~~~~--  231 (343)
T cd08235         157 AQRKAGIKPGDTVLVIGAGPIGLLHAM-LAKASGARKVIVSDLNEFRLEFAKKLGADYTIDAA--EEDLVEKVRELTD--  231 (343)
T ss_pred             HHHhcCCCCCCEEEEECCCHHHHHHHH-HHHHcCCcEEEEECCCHHHHHHHHHhCCcEEecCC--ccCHHHHHHHHhC--
Confidence            987678999999999988999999999 99999997578888889998888899998776643  3567676665532  


Q ss_pred             CCCceEEEeCCCCHHHHHHHHHhcccCCEEEEEccCCCC--ccccchHhhhcCcEEEeeccc-CCcHHHHHHHHHcCCCC
Q 017868          253 GTGIDVSFDCAGLNKTMSTALGATCAGGKVCLVGMGHHE--MTVPLTPAAVREVDVVGVFRY-KNTWPLCLELLRSGKID  329 (365)
Q Consensus       253 ~~~~d~vid~~g~~~~~~~~~~~l~~~G~~~~~g~~~~~--~~~~~~~~~~~~~~i~~~~~~-~~~~~~~~~~l~~g~~~  329 (365)
                      +.++|+++|+++....+...+++++++|+++.++.....  ..........+++++.+.... ...+++++++++++.+.
T Consensus       232 ~~~vd~vld~~~~~~~~~~~~~~l~~~g~~v~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~l~~~~~l~  311 (343)
T cd08235         232 GRGADVVIVATGSPEAQAQALELVRKGGRILFFGGLPKGSTVNIDPNLIHYREITITGSYAASPEDYKEALELIASGKID  311 (343)
T ss_pred             CcCCCEEEECCCChHHHHHHHHHhhcCCEEEEEeccCCCCCcccCHHHHhhCceEEEEEecCChhhHHHHHHHHHcCCCC
Confidence            567999999999766888999999999999998753322  223334567788888776554 56788999999999985


Q ss_pred             CCCceEEEecCChhhHHHHHHHHhcCCCceEEEEe
Q 017868          330 VKPLVTHRFGFSQKEVEEAFETSARGGTAIKVMFN  364 (365)
Q Consensus       330 ~~~~~~~~~~~~~~~~~~a~~~~~~~~~~gk~vi~  364 (365)
                      +.+.+...|++  +++.+|++.+.+++ .+|+|++
T Consensus       312 ~~~~~~~~~~~--~~~~~a~~~~~~~~-~~k~vi~  343 (343)
T cd08235         312 VKDLITHRFPL--EDIEEAFELAADGK-SLKIVIT  343 (343)
T ss_pred             hHHheeeEeeH--HHHHHHHHHHhCCC-cEEEEeC
Confidence            43456677888  99999999999988 9999975

Putative L-iditol 2-dehydrogenase based on annotation of some members in this subgroup. L-iditol 2-dehydrogenase catalyzes the NAD+-dependent conversion of L-iditol to L-sorbose in fructose and mannose metabolism. This enzyme is related to sorbitol dehydrogenase, alcohol dehydrogenase, and other medium chain dehydrogenase/reductases. The zinc-dependent alcohol dehydrogenase (ADH-Zn)-like family of proteins is a diverse group of proteins related to the first identified member, class I mammalian ADH. This group is also called the medium chain dehydrogenases/reductase family (MDR) to highlight its broad range of activities and to distinguish from the smaller short chain dehydrogenases (~ 250 amino acids vs. the ~ 350 amino acids of the MDR). The MDR proteins have 2 domains: a C-terminal NAD(P) binding-Rossmann fold domain of a beta-alpha form and an N-terminal GroES-like catalytic domain. The MDR group contains a host of activities, i

>cd08240 6_hydroxyhexanoate_dh_like 6-hydroxyhexanoate dehydrogenase

Probab=100.00  E-value=1.7e-40  Score=305.88  Aligned_cols=337  Identities=27%  Similarity=0.420  Sum_probs=279.3

Q ss_pred             ceeEEEecC-CceEEEEecCCCCCCCcEEEEEeeeeeCcccHhhhhccccC---------CccCCCCcccCccceEEEEE
Q 017868           18 NMAAWLLGV-NTLKIQPFELPSLGPYDVLVRMKAVGICGSDVHYLKTLRCA---------DFVVKEPMVIGHECAGVIEK   87 (365)
Q Consensus        18 ~~~~~~~~~-~~l~~~~~~~p~~~~~eVlI~v~~~~l~~~D~~~~~g~~~~---------~~~~~~p~~~G~e~~G~V~~   87 (365)
                      ||++++..+ ..+++.++|.|++.++||+|||.++++|+.|+....|...-         .....+|.++|+|++|+|++
T Consensus         1 ~~a~~~~~~~~~~~~~~~~~p~~~~~ev~V~v~~~~i~~~d~~~~~g~~~~~~~~~~~~~~~~~~~~~~~g~e~~G~V~~   80 (350)
T cd08240           1 MKAAAVVEPGKPLEEVEIDTPKPPGTEVLVKVTACGVCHSDLHIWDGGYDLGGGKTMSLDDRGVKLPLVLGHEIVGEVVA   80 (350)
T ss_pred             CeeEEeccCCCCceEEecCCCCCCCCeEEEEEEEEecCchhHHHHcCCCCccccccccccccCCCCCcccccceeEEEEe
Confidence            577777754 45899999999999999999999999999999988764210         00123467899999999999


Q ss_pred             eCCCCCCCCCCCEEEEcCCcCCCCCccccCCCCCCCCCccccccCCCCcceeeEEeecCCceEECCCCCCcchhccch-h
Q 017868           88 VGSEVKTLVPGDRVALEPGISCWRCDHCKGGRYNLCPEMKFFATPPVHGSLANQVVHPADLCFKLPDNVSLEEGAMCE-P  166 (365)
Q Consensus        88 vG~~v~~~~~Gd~V~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~v~~~~~~~iP~~~~~~~a~~~~-~  166 (365)
                      +|++++++++||+|++++...|++|..|+++..++|.+....+. ...|++++|+.++.++++++|+++++.+++.+. .
T Consensus        81 vG~~v~~~~~Gd~V~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~~~g~~~~~~~~~~~~~~~~p~~~s~~~aa~l~~~  159 (350)
T cd08240          81 VGPDAADVKVGDKVLVYPWIGCGECPVCLAGDENLCAKGRALGI-FQDGGYAEYVIVPHSRYLVDPGGLDPALAATLACS  159 (350)
T ss_pred             eCCCCCCCCCCCEEEECCcCCCCCChHHHCcCcccCCCCCceee-eccCcceeeEEecHHHeeeCCCCCCHHHeehhhch
Confidence            99999999999999999999999999999999999988766654 257999999999999999999999999988775 7


Q ss_pred             hHHHHHHHHh-cCCCCCCEEEEEcCCHHHHHHHHHHHHHCCCCeEEEEeCChhHHHHHHHcCCCEEEeCCCCcccHHHHH
Q 017868          167 LSVGLHACRR-ANIGPETNVLIMGAGPIGLVTMLGAPRAFGAPRIVIVDVDDYRLSVAKEIGADNIVKVSTNLQDIAEEV  245 (365)
Q Consensus       167 ~~~a~~~~~~-~~~~~g~~vlI~G~g~~G~~ai~~l~~~~g~~~vi~v~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~i  245 (365)
                      +.+||++++. ..++++++|||+|+|.+|++++| +++..|+++++++++++++.+.++++|++.+++.  ...++.+.+
T Consensus       160 ~~tA~~~~~~~~~~~~~~~vlI~g~g~vg~~~~~-~a~~~G~~~v~~~~~~~~~~~~~~~~g~~~~~~~--~~~~~~~~~  236 (350)
T cd08240         160 GLTAYSAVKKLMPLVADEPVVIIGAGGLGLMALA-LLKALGPANIIVVDIDEAKLEAAKAAGADVVVNG--SDPDAAKRI  236 (350)
T ss_pred             hhhHHHHHHhcccCCCCCEEEEECCcHHHHHHHH-HHHHcCCCeEEEEeCCHHHHHHHHHhCCcEEecC--CCccHHHHH
Confidence            7899999865 44568999999988999999999 9999999878888889999999999999776653  334555555


Q ss_pred             HHHHHHhCCCceEEEeCCCCHHHHHHHHHhcccCCEEEEEccCCCCccccchHhhhcCcEEEeeccc-CCcHHHHHHHHH
Q 017868          246 EKIQKAMGTGIDVSFDCAGLNKTMSTALGATCAGGKVCLVGMGHHEMTVPLTPAAVREVDVVGVFRY-KNTWPLCLELLR  324 (365)
Q Consensus       246 ~~~~~~~~~~~d~vid~~g~~~~~~~~~~~l~~~G~~~~~g~~~~~~~~~~~~~~~~~~~i~~~~~~-~~~~~~~~~~l~  324 (365)
                      .+..   ++++|++||++|....+..++++|+++|+++.+|..............+++.++.+.... .+++.+++++++
T Consensus       237 ~~~~---~~~~d~vid~~g~~~~~~~~~~~l~~~g~~v~~g~~~~~~~~~~~~~~~~~~~i~~~~~~~~~~~~~~~~ll~  313 (350)
T cd08240         237 IKAA---GGGVDAVIDFVNNSATASLAFDILAKGGKLVLVGLFGGEATLPLPLLPLRALTIQGSYVGSLEELRELVALAK  313 (350)
T ss_pred             HHHh---CCCCcEEEECCCCHHHHHHHHHHhhcCCeEEEECCCCCCCcccHHHHhhcCcEEEEcccCCHHHHHHHHHHHH
Confidence            5443   338999999999767889999999999999998865443334444566788888887655 467889999999


Q ss_pred             cCCCCCCCceEEEecCChhhHHHHHHHHhcCCCceEEEEeC
Q 017868          325 SGKIDVKPLVTHRFGFSQKEVEEAFETSARGGTAIKVMFNL  365 (365)
Q Consensus       325 ~g~~~~~~~~~~~~~~~~~~~~~a~~~~~~~~~~gk~vi~~  365 (365)
                      ++.+.  +...+.|++  +++++|++.+.++...||++++.
T Consensus       314 ~~~i~--~~~~~~~~~--~~~~~a~~~~~~~~~~gkvvv~~  350 (350)
T cd08240         314 AGKLK--PIPLTERPL--SDVNDALDDLKAGKVVGRAVLKP  350 (350)
T ss_pred             cCCCc--cceeeEEcH--HHHHHHHHHHHcCCccceEEecC
Confidence            99984  445677888  99999999999998899999863

6-hydroxyhexanoate dehydrogenase, an enzyme of the zinc-dependent alcohol dehydrogenase-like family of medium chain dehydrogenases/reductases catalyzes the conversion of 6-hydroxyhexanoate and NAD(+) to 6-oxohexanoate + NADH and H+. NAD(P)(H)-dependent oxidoreductases are the major enzymes in the interconversion of alcohols and aldehydes, or ketones. Alcohol dehydrogenase in the liver converts ethanol and NAD+ to acetaldehyde and NADH, while in yeast and some other microorganisms ADH catalyzes the conversion acetaldehyde to ethanol in alcoholic fermentation. ADH is a member of the medium chain alcohol dehydrogenase family (MDR), which has a NAD(P)(H)-binding domain in a Rossmann fold of a beta-alpha form. The NAD(H)-binding region is comprised of 2 structurally similar halves, each of which contacts a mononucleotide. A GxGxxG motif after the first mononucleotide contact half allows the close contact of the coenzy

>cd08279 Zn_ADH_class_III Class III alcohol dehydrogenase

Probab=100.00  E-value=2.8e-40  Score=305.54  Aligned_cols=334  Identities=33%  Similarity=0.522  Sum_probs=273.7

Q ss_pred             ceeEEEecC-CceEEEEecCCCCCCCcEEEEEeeeeeCcccHhhhhccccCCccCCCCcccCccceEEEEEeCCCCCCCC
Q 017868           18 NMAAWLLGV-NTLKIQPFELPSLGPYDVLVRMKAVGICGSDVHYLKTLRCADFVVKEPMVIGHECAGVIEKVGSEVKTLV   96 (365)
Q Consensus        18 ~~~~~~~~~-~~l~~~~~~~p~~~~~eVlI~v~~~~l~~~D~~~~~g~~~~~~~~~~p~~~G~e~~G~V~~vG~~v~~~~   96 (365)
                      |+++++..+ +.+++.++|.|++.++||+|+|.++++|+.|+....|...    ..+|.++|+|++|+|+++|++++.|+
T Consensus         1 m~a~~~~~~~~~~~~~~~~~p~~~~~~v~i~v~~~~i~~~d~~~~~g~~~----~~~~~~~g~e~~G~V~~vG~~v~~~~   76 (363)
T cd08279           1 MRAAVLHEVGKPLEIEEVELDDPGPGEVLVRIAAAGLCHSDLHVVTGDLP----APLPAVLGHEGAGVVEEVGPGVTGVK   76 (363)
T ss_pred             CeEEEEecCCCCceEEEeeCCCCCCCeEEEEEEEeecCcHHHHHhcCCCC----CCCCccccccceEEEEEeCCCccccC
Confidence            578888875 6889999999999999999999999999999988876432    34577899999999999999999999


Q ss_pred             CCCEEEEcCCcCCCCCccccCCCCCCCCCcccc---------------cc----CCCCcceeeEEeecCCceEECCCCCC
Q 017868           97 PGDRVALEPGISCWRCDHCKGGRYNLCPEMKFF---------------AT----PPVHGSLANQVVHPADLCFKLPDNVS  157 (365)
Q Consensus        97 ~Gd~V~~~~~~~~~~~~~~~~~~~~~~~~~~~~---------------~~----~~~~g~~~~~~~v~~~~~~~iP~~~~  157 (365)
                      +||+|++.+...|++|.+|++++.++|.+...+               +.    ....|+|++|+.++++.++++|++++
T Consensus        77 ~Gd~V~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~lp~~~~  156 (363)
T cd08279          77 PGDHVVLSWIPACGTCRYCSRGQPNLCDLGAGILGGQLPDGTRRFTADGEPVGAMCGLGTFAEYTVVPEASVVKIDDDIP  156 (363)
T ss_pred             CCCEEEECCCCCCCCChhhcCCCcccCcccccccccccCCCcccccccCccccccccCccceeeEEeccccEEECCCCCC
Confidence            999999999999999999999999999865321               00    02358999999999999999999999


Q ss_pred             cchhccch-hhHHHHHHH-HhcCCCCCCEEEEEcCCHHHHHHHHHHHHHCCCCeEEEEeCChhHHHHHHHcCCCEEEeCC
Q 017868          158 LEEGAMCE-PLSVGLHAC-RRANIGPETNVLIMGAGPIGLVTMLGAPRAFGAPRIVIVDVDDYRLSVAKEIGADNIVKVS  235 (365)
Q Consensus       158 ~~~a~~~~-~~~~a~~~~-~~~~~~~g~~vlI~G~g~~G~~ai~~l~~~~g~~~vi~v~~~~~~~~~~~~~g~~~~~~~~  235 (365)
                      +++++.++ .+.+||+++ +..++.++++|||+|+|.+|+++++ +++..|+++++++++++++.++++++|++++++.+
T Consensus       157 ~~~aa~~~~~~~ta~~~~~~~~~~~~g~~vLI~g~g~vG~a~i~-lak~~G~~~Vi~~~~~~~~~~~~~~~g~~~vv~~~  235 (363)
T cd08279         157 LDRAALLGCGVTTGVGAVVNTARVRPGDTVAVIGCGGVGLNAIQ-GARIAGASRIIAVDPVPEKLELARRFGATHTVNAS  235 (363)
T ss_pred             hHHeehhcchhHHHHHHHHhccCCCCCCEEEEECCCHHHHHHHH-HHHHcCCCcEEEEcCCHHHHHHHHHhCCeEEeCCC
Confidence            99988886 678888886 5688999999999988999999999 99999997688888899999999999998776643


Q ss_pred             CCcccHHHHHHHHHHHhCCCceEEEeCCCCHHHHHHHHHhcccCCEEEEEccCCC--CccccchHhhhcCcEEEeecc--
Q 017868          236 TNLQDIAEEVEKIQKAMGTGIDVSFDCAGLNKTMSTALGATCAGGKVCLVGMGHH--EMTVPLTPAAVREVDVVGVFR--  311 (365)
Q Consensus       236 ~~~~~~~~~i~~~~~~~~~~~d~vid~~g~~~~~~~~~~~l~~~G~~~~~g~~~~--~~~~~~~~~~~~~~~i~~~~~--  311 (365)
                        ..++...++++..  +.++|+++|+++....+...+++++++|+++.++....  ...+....+..+...+.+...  
T Consensus       236 --~~~~~~~l~~~~~--~~~vd~vld~~~~~~~~~~~~~~l~~~G~~v~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  311 (363)
T cd08279         236 --EDDAVEAVRDLTD--GRGADYAFEAVGRAATIRQALAMTRKGGTAVVVGMGPPGETVSLPALELFLSEKRLQGSLYGS  311 (363)
T ss_pred             --CccHHHHHHHHcC--CCCCCEEEEcCCChHHHHHHHHHhhcCCeEEEEecCCCCcccccCHHHHhhcCcEEEEEEecC
Confidence              3466666665532  57899999999976688899999999999999975432  233444445556666666532  


Q ss_pred             --cCCcHHHHHHHHHcCCCCCCCceEEEecCChhhHHHHHHHHhcCCCceEEE
Q 017868          312 --YKNTWPLCLELLRSGKIDVKPLVTHRFGFSQKEVEEAFETSARGGTAIKVM  362 (365)
Q Consensus       312 --~~~~~~~~~~~l~~g~~~~~~~~~~~~~~~~~~~~~a~~~~~~~~~~gk~v  362 (365)
                        ....+++++++++++.+.+.+.+.+.|++  +++++|++.+++++..+.++
T Consensus       312 ~~~~~~~~~~~~l~~~g~l~~~~~~~~~~~~--~~~~~a~~~~~~~~~~~~~~  362 (363)
T cd08279         312 ANPRRDIPRLLDLYRAGRLKLDELVTRRYSL--DEINEAFADMLAGENARGVI  362 (363)
T ss_pred             cCcHHHHHHHHHHHHcCCCCcceeEEEEEcH--HHHHHHHHHHhcCCceeEEe
Confidence              25678899999999998544456778888  99999999998886654444

Glutathione-dependent formaldehyde dehydrogenases (FDHs, Class III ADH) are members of the zinc-dependent/medium chain alcohol dehydrogenase family. FDH converts formaldehyde and NAD(P) to formate and NAD(P)H. The initial step in this process the spontaneous formation of a S-(hydroxymethyl)glutathione adduct from formaldehyde and glutathione, followed by FDH-mediated oxidation (and detoxification) of the adduct to S-formylglutathione. NAD(P)(H)-dependent oxidoreductases are the major enzymes in the interconversion of alcohols and aldehydes or ketones. Alcohol dehydrogenase in the liver converts ethanol and NAD+ to acetaldehyde and NADH, while in yeast and some other microorganisms ADH catalyzes the conversion acetaldehyde to ethanol in alcoholic fermentation. Class III ADH are also known as glutathione-dependent formaldehyde dehydrogenase (FDH), which convert aldehydes to corresponding carboxylic acid and alcohol. ADH is a me

>cd08261 Zn_ADH7 Alcohol dehydrogenases of the MDR family

Probab=100.00  E-value=6.7e-40  Score=300.36  Aligned_cols=335  Identities=37%  Similarity=0.649  Sum_probs=276.7

Q ss_pred             ceeEEEecCCceEEEEecCCCCCCCcEEEEEeeeeeCcccHhhhhccccCCccCCCCcccCccceEEEEEeCCCCCCCCC
Q 017868           18 NMAAWLLGVNTLKIQPFELPSLGPYDVLVRMKAVGICGSDVHYLKTLRCADFVVKEPMVIGHECAGVIEKVGSEVKTLVP   97 (365)
Q Consensus        18 ~~~~~~~~~~~l~~~~~~~p~~~~~eVlI~v~~~~l~~~D~~~~~g~~~~~~~~~~p~~~G~e~~G~V~~vG~~v~~~~~   97 (365)
                      |+++++..++.+++.+.+.|++.++||+|+|.++++|+.|+....+....   ..+|.++|+|++|+|+++|++++.|++
T Consensus         1 ~~a~~~~~~~~~~~~~~~~~~~~~~~v~v~v~~~~l~~~d~~~~~~~~~~---~~~~~~~g~e~~G~V~~~G~~v~~~~~   77 (337)
T cd08261           1 MKALVCEKPGRLEVVDIPEPVPGAGEVLVRVKRVGICGSDLHIYHGRNPF---ASYPRILGHELSGEVVEVGEGVAGLKV   77 (337)
T ss_pred             CeEEEEeCCCceEEEECCCCCCCCCeEEEEEEEEeEcccChHHHcCCCCc---CCCCcccccccEEEEEEeCCCCCCCCC
Confidence            57888888889999999999999999999999999999999988764322   234778999999999999999999999


Q ss_pred             CCEEEEcCCcCCCCCccccCCCCCCCCCccccccCCCCcceeeEEeecCCceEECCCCCCcchhccchhhHHHHHHHHhc
Q 017868           98 GDRVALEPGISCWRCDHCKGGRYNLCPEMKFFATPPVHGSLANQVVHPADLCFKLPDNVSLEEGAMCEPLSVGLHACRRA  177 (365)
Q Consensus        98 Gd~V~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~v~~~~~~~iP~~~~~~~a~~~~~~~~a~~~~~~~  177 (365)
                      ||+|++.+..+|+.|..|..+.++.|......+. ...|+|++|+.++++ ++++|+++++++++.++.+.+++++++..
T Consensus        78 Gd~V~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~~~g~~~~~v~v~~~-~~~~p~~~~~~~aa~~~~~~~a~~~~~~~  155 (337)
T cd08261          78 GDRVVVDPYISCGECYACRKGRPNCCENLQVLGV-HRDGGFAEYIVVPAD-ALLVPEGLSLDQAALVEPLAIGAHAVRRA  155 (337)
T ss_pred             CCEEEECCCCCCCCChhhhCcCcccCCCCCeeee-cCCCcceeEEEechh-eEECCCCCCHHHhhhhchHHHHHHHHHhc
Confidence            9999999888999999999999999964322222 246999999999999 99999999999998777777888888778


Q ss_pred             CCCCCCEEEEEcCCHHHHHHHHHHHHHCCCCeEEEEeCChhHHHHHHHcCCCEEEeCCCCcccHHHHHHHHHHHhCCCce
Q 017868          178 NIGPETNVLIMGAGPIGLVTMLGAPRAFGAPRIVIVDVDDYRLSVAKEIGADNIVKVSTNLQDIAEEVEKIQKAMGTGID  257 (365)
Q Consensus       178 ~~~~g~~vlI~G~g~~G~~ai~~l~~~~g~~~vi~v~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~i~~~~~~~~~~~d  257 (365)
                      ++.+|++|||+|+|.+|++++| +++.+|++ ++++.+++++.++++++|+++++++..  .++.+.+.+...  +.++|
T Consensus       156 ~l~~g~~vLI~g~g~vG~~a~~-lA~~~g~~-v~~~~~s~~~~~~~~~~g~~~v~~~~~--~~~~~~l~~~~~--~~~vd  229 (337)
T cd08261         156 GVTAGDTVLVVGAGPIGLGVIQ-VAKARGAR-VIVVDIDDERLEFARELGADDTINVGD--EDVAARLRELTD--GEGAD  229 (337)
T ss_pred             CCCCCCEEEEECCCHHHHHHHH-HHHHcCCe-EEEECCCHHHHHHHHHhCCCEEecCcc--cCHHHHHHHHhC--CCCCC
Confidence            8999999999988999999999 99999995 677777899999999999988877543  456666665532  56799


Q ss_pred             EEEeCCCCHHHHHHHHHhcccCCEEEEEccCCCCccccchHhhhcCcEEEeeccc-CCcHHHHHHHHHcCCCCCCCceEE
Q 017868          258 VSFDCAGLNKTMSTALGATCAGGKVCLVGMGHHEMTVPLTPAAVREVDVVGVFRY-KNTWPLCLELLRSGKIDVKPLVTH  336 (365)
Q Consensus       258 ~vid~~g~~~~~~~~~~~l~~~G~~~~~g~~~~~~~~~~~~~~~~~~~i~~~~~~-~~~~~~~~~~l~~g~~~~~~~~~~  336 (365)
                      +++|++|....+..++++|+++|+++.++............+..+++++.+.... .+.+++++++++++.+.+.+....
T Consensus       230 ~vld~~g~~~~~~~~~~~l~~~G~~i~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~i~~~~~~~~  309 (337)
T cd08261         230 VVIDATGNPASMEEAVELVAHGGRVVLVGLSKGPVTFPDPEFHKKELTILGSRNATREDFPDVIDLLESGKVDPEALITH  309 (337)
T ss_pred             EEEECCCCHHHHHHHHHHHhcCCEEEEEcCCCCCCccCHHHHHhCCCEEEEeccCChhhHHHHHHHHHcCCCChhhheEE
Confidence            9999998777888999999999999998754433333333455677777765433 457889999999999954225677


Q ss_pred             EecCChhhHHHHHHHHhcC-CCceEEEEeC
Q 017868          337 RFGFSQKEVEEAFETSARG-GTAIKVMFNL  365 (365)
Q Consensus       337 ~~~~~~~~~~~a~~~~~~~-~~~gk~vi~~  365 (365)
                      .+++  +++.+|++.+.++ ...+|+|+++
T Consensus       310 ~~~~--~~~~~a~~~~~~~~~~~~k~v~~~  337 (337)
T cd08261         310 RFPF--EDVPEAFDLWEAPPGGVIKVLIEF  337 (337)
T ss_pred             EeeH--HHHHHHHHHHhcCCCceEEEEEeC
Confidence            8888  9999999999988 5889999975

This group contains members identified as related to zinc-dependent alcohol dehydrogenase and other members of the MDR family. The medium chain dehydrogenases/reductase (MDR)/zinc-dependent alcohol dehydrogenase-like family, which contains the zinc-dependent alcohol dehydrogenase (ADH-Zn) and related proteins, is a diverse group of proteins related to the first identified member, class I mammalian ADH. MDRs display a broad range of activities and are distinguished from the smaller short chain dehydrogenases (~ 250 amino acids vs. the ~ 350 amino acids of the MDR). The MDR proteins have 2 domains: a C-terminal NAD(P)-binding Rossmann fold domain of a beta-alpha form and an N-terminal catalytic domain with distant homology to GroES. The MDR group includes various activities, including the founding alcohol dehydrogenase (ADH), quinone reductase, sorbitol dehydrogenase, formaldehyde dehydrogenase, butanediol DH, ketose reductase,

>cd08287 FDH_like_ADH3 formaldehyde dehydrogenase (FDH)-like

Probab=100.00  E-value=6.2e-40  Score=301.59  Aligned_cols=334  Identities=28%  Similarity=0.484  Sum_probs=275.0

Q ss_pred             ceeEEEecCCceEEEEecCCCC-CCCcEEEEEeeeeeCcccHhhhhccccCCccCCCCcccCccceEEEEEeCCCCCCCC
Q 017868           18 NMAAWLLGVNTLKIQPFELPSL-GPYDVLVRMKAVGICGSDVHYLKTLRCADFVVKEPMVIGHECAGVIEKVGSEVKTLV   96 (365)
Q Consensus        18 ~~~~~~~~~~~l~~~~~~~p~~-~~~eVlI~v~~~~l~~~D~~~~~g~~~~~~~~~~p~~~G~e~~G~V~~vG~~v~~~~   96 (365)
                      |+++++.+++.+++.+.|.|.| +++||+||+.++++|++|+....|.+.    ...|.++|||++|+|+++|+++++++
T Consensus         1 m~~~~~~~~~~~~~~~~~~p~~~~~~ev~V~v~~~~i~~~d~~~~~g~~~----~~~~~~~g~e~~G~V~~vG~~v~~~~   76 (345)
T cd08287           1 MRATVIHGPGDIRVEEVPDPVIEEPTDAVIRVVATCVCGSDLWPYRGVSP----TRAPAPIGHEFVGVVEEVGSEVTSVK   76 (345)
T ss_pred             CceeEEecCCceeEEeCCCCCCCCCCeEEEEEeeeeecccchhhhcCCCC----CCCCcccccceEEEEEEeCCCCCccC
Confidence            5788999888999999999996 999999999999999999988876432    23478999999999999999999999


Q ss_pred             CCCEEEEcCCcCCCCCccccCCCCCCCCCccccccCCCCcceeeEEeecCC--ceEECCCCCCcchhccc------hhhH
Q 017868           97 PGDRVALEPGISCWRCDHCKGGRYNLCPEMKFFATPPVHGSLANQVVHPAD--LCFKLPDNVSLEEGAMC------EPLS  168 (365)
Q Consensus        97 ~Gd~V~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~v~~~--~~~~iP~~~~~~~a~~~------~~~~  168 (365)
                      +||+|++....+|+.|.+|..+..+.|.+...++. ..+|+|++|+.++.+  .++++|++++++.+...      ..+.
T Consensus        77 ~Gd~V~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~~~g~~~~~~~v~~~~~~~~~lP~~l~~~~~~~~~~~~l~~~~~  155 (345)
T cd08287          77 PGDFVIAPFAISDGTCPFCRAGFTTSCVHGGFWGA-FVDGGQGEYVRVPLADGTLVKVPGSPSDDEDLLPSLLALSDVMG  155 (345)
T ss_pred             CCCEEEeccccCCCCChhhhCcCcccCCCCCcccC-CCCCceEEEEEcchhhCceEECCCCCChhhhhhhhhHhhhcHHH
Confidence            99999986677899999999999999987766553 467999999999974  99999999988322211      3567


Q ss_pred             HHHHHHHhcCCCCCCEEEEEcCCHHHHHHHHHHHHHCCCCeEEEEeCChhHHHHHHHcCCCEEEeCCCCcccHHHHHHHH
Q 017868          169 VGLHACRRANIGPETNVLIMGAGPIGLVTMLGAPRAFGAPRIVIVDVDDYRLSVAKEIGADNIVKVSTNLQDIAEEVEKI  248 (365)
Q Consensus       169 ~a~~~~~~~~~~~g~~vlI~G~g~~G~~ai~~l~~~~g~~~vi~v~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~i~~~  248 (365)
                      +|++++..+++++|++|+|.|+|.+|+++++ +++..|+++++++++++++.++++++|++.++++..  .++.+.+.+.
T Consensus       156 ~a~~~~~~~~~~~g~~vlI~g~g~vg~~~~~-lak~~G~~~v~~~~~~~~~~~~~~~~ga~~v~~~~~--~~~~~~i~~~  232 (345)
T cd08287         156 TGHHAAVSAGVRPGSTVVVVGDGAVGLCAVL-AAKRLGAERIIAMSRHEDRQALAREFGATDIVAERG--EEAVARVREL  232 (345)
T ss_pred             HHHHHHHhcCCCCCCEEEEECCCHHHHHHHH-HHHHcCCCEEEEECCCHHHHHHHHHcCCceEecCCc--ccHHHHHHHh
Confidence            8888887788999999999888999999999 999999987899988888999999999988877543  4566666554


Q ss_pred             HHHhCCCceEEEeCCCCHHHHHHHHHhcccCCEEEEEccCCCCccccchHhhhcCcEEEeeccc-CCcHHHHHHHHHcCC
Q 017868          249 QKAMGTGIDVSFDCAGLNKTMSTALGATCAGGKVCLVGMGHHEMTVPLTPAAVREVDVVGVFRY-KNTWPLCLELLRSGK  327 (365)
Q Consensus       249 ~~~~~~~~d~vid~~g~~~~~~~~~~~l~~~G~~~~~g~~~~~~~~~~~~~~~~~~~i~~~~~~-~~~~~~~~~~l~~g~  327 (365)
                      .  .+.++|+++|++|....+..++++++++|+++.++.......++......+++++.+.... .+.++++++++.++.
T Consensus       233 ~--~~~~~d~il~~~g~~~~~~~~~~~l~~~g~~v~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  310 (345)
T cd08287         233 T--GGVGADAVLECVGTQESMEQAIAIARPGGRVGYVGVPHGGVELDVRELFFRNVGLAGGPAPVRRYLPELLDDVLAGR  310 (345)
T ss_pred             c--CCCCCCEEEECCCCHHHHHHHHHhhccCCEEEEecccCCCCccCHHHHHhcceEEEEecCCcHHHHHHHHHHHHcCC
Confidence            3  2568999999998877889999999999999998765433333433456788888775443 567899999999999


Q ss_pred             CCCCCceEEEecCChhhHHHHHHHHhcCCCceEEEEe
Q 017868          328 IDVKPLVTHRFGFSQKEVEEAFETSARGGTAIKVMFN  364 (365)
Q Consensus       328 ~~~~~~~~~~~~~~~~~~~~a~~~~~~~~~~gk~vi~  364 (365)
                      +.+.+.+++.+++  +++++|++.+..+.. .|++|+
T Consensus       311 l~~~~~~~~~~~l--~~~~~a~~~~~~~~~-~k~~~~  344 (345)
T cd08287         311 INPGRVFDLTLPL--DEVAEGYRAMDERRA-IKVLLR  344 (345)
T ss_pred             CCHHHhEEeeecH--HHHHHHHHHHhCCCc-eEEEeC
Confidence            8544456788888  999999999887654 499986

This group contains proteins identified as alcohol dehydrogenases and glutathione-dependant formaldehyde dehydrogenases (FDH) of the zinc-dependent/medium chain alcohol dehydrogenase family. The MDR family uses NAD(H) as a cofactor in the interconversion of alcohols and aldehydes, or ketones. FDH converts formaldehyde and NAD to formate and NADH. The initial step in this process the spontaneous formation of a S-(hydroxymethyl)glutathione adduct from formaldehyde and glutathione, followed by FDH-mediated oxidation (and detoxification) of the adduct to S-formylglutathione. The medium chain alcohol dehydrogenase family (MDR) has a NAD(P)(H)-binding domain in a Rossmann fold of a beta-alpha form. The N-terminal region typically has an all-beta catalytic domain. These proteins typically form dimers (typically higher plants, mammals) or tetramers (yeast, bacteria), and have 2 tightly bound zinc atoms per subunit.

>cd08263 Zn_ADH10 Alcohol dehydrogenases of the MDR family

Probab=100.00  E-value=8.2e-40  Score=302.97  Aligned_cols=336  Identities=31%  Similarity=0.520  Sum_probs=278.2

Q ss_pred             ceeEEEecC-CceEEEEecCCCCCCCcEEEEEeeeeeCcccHhhhhccccCCccCCCCcccCccceEEEEEeCCCCCC--
Q 017868           18 NMAAWLLGV-NTLKIQPFELPSLGPYDVLVRMKAVGICGSDVHYLKTLRCADFVVKEPMVIGHECAGVIEKVGSEVKT--   94 (365)
Q Consensus        18 ~~~~~~~~~-~~l~~~~~~~p~~~~~eVlI~v~~~~l~~~D~~~~~g~~~~~~~~~~p~~~G~e~~G~V~~vG~~v~~--   94 (365)
                      |+++++..+ .++++.+.|.|.++++||+||+.++++|+.|+....+.+.    ..+|.++|+|++|+|+.+|+++++  
T Consensus         1 ~~a~~~~~~~~~~~~~~~~~~~~~~~~v~v~v~~~~l~~~d~~~~~~~~~----~~~p~~~g~e~~G~v~~vG~~~~~~~   76 (367)
T cd08263           1 MKAAVLKGPNPPLTIEEIPVPRPKEGEILIRVAACGVCHSDLHVLKGELP----FPPPFVLGHEISGEVVEVGPNVENPY   76 (367)
T ss_pred             CeeEEEecCCCCcEEEEeeCCCCCCCeEEEEEEEeeeCcchHHHhcCCCC----CCCCcccccccceEEEEeCCCCCCCC
Confidence            567788765 5789999999999999999999999999999998876432    356789999999999999999988  


Q ss_pred             -CCCCCEEEEcCCcCCCCCccccCCCCCCCCCccccccC---------------------CCCcceeeEEeecCCceEEC
Q 017868           95 -LVPGDRVALEPGISCWRCDHCKGGRYNLCPEMKFFATP---------------------PVHGSLANQVVHPADLCFKL  152 (365)
Q Consensus        95 -~~~Gd~V~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~---------------------~~~g~~~~~~~v~~~~~~~i  152 (365)
                       |++||+|++.+..+|+.|.+|..+..++|++..++...                     ...|+|++|+.++.+.++++
T Consensus        77 ~~~~Gd~V~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~  156 (367)
T cd08263          77 GLSVGDRVVGSFIMPCGKCRYCARGKENLCEDFFAYNRLKGTLYDGTTRLFRLDGGPVYMYSMGGLAEYAVVPATALAPL  156 (367)
T ss_pred             cCCCCCEEEEcCCCCCCCChHHhCcCcccCcCccccccccccccCCcccccccCCCccccccCCcceeEEEechhhEEEC
Confidence             99999999999999999999999999999976422110                     13589999999999999999


Q ss_pred             CCCCCcchhccch-hhHHHHHHHH-hcCCCCCCEEEEEcCCHHHHHHHHHHHHHCCCCeEEEEeCChhHHHHHHHcCCCE
Q 017868          153 PDNVSLEEGAMCE-PLSVGLHACR-RANIGPETNVLIMGAGPIGLVTMLGAPRAFGAPRIVIVDVDDYRLSVAKEIGADN  230 (365)
Q Consensus       153 P~~~~~~~a~~~~-~~~~a~~~~~-~~~~~~g~~vlI~G~g~~G~~ai~~l~~~~g~~~vi~v~~~~~~~~~~~~~g~~~  230 (365)
                      |+++++.+++.++ .+.+||+++. ...+.++++|||+|+|.+|+++++ +++..|+++++++++++++.++++++|++.
T Consensus       157 P~~is~~~aa~l~~~~~tA~~~l~~~~~~~~g~~VlI~g~g~vG~~~~~-lak~~G~~~vi~~~~s~~~~~~~~~~g~~~  235 (367)
T cd08263         157 PESLDYTESAVLGCAGFTAYGALKHAADVRPGETVAVIGVGGVGSSAIQ-LAKAFGASPIIAVDVRDEKLAKAKELGATH  235 (367)
T ss_pred             CCCCCHHHHhHhcchHHHHHHHHHhcccCCCCCEEEEECCcHHHHHHHH-HHHHcCCCeEEEEeCCHHHHHHHHHhCCce
Confidence            9999999998886 7889999984 567899999999988999999999 999999976888888899999999999988


Q ss_pred             EEeCCCCcccHHHHHHHHHHHhCCCceEEEeCCCCHHHHHHHHHhcccCCEEEEEccCCC--CccccchHhhhcCcEEEe
Q 017868          231 IVKVSTNLQDIAEEVEKIQKAMGTGIDVSFDCAGLNKTMSTALGATCAGGKVCLVGMGHH--EMTVPLTPAAVREVDVVG  308 (365)
Q Consensus       231 ~~~~~~~~~~~~~~i~~~~~~~~~~~d~vid~~g~~~~~~~~~~~l~~~G~~~~~g~~~~--~~~~~~~~~~~~~~~i~~  308 (365)
                      +++.+  ..++.+.++....  +.++|++||++++......++++++++|+++.++....  ...+....+..+++++.+
T Consensus       236 v~~~~--~~~~~~~l~~~~~--~~~~d~vld~vg~~~~~~~~~~~l~~~G~~v~~g~~~~~~~~~~~~~~~~~~~~~~~~  311 (367)
T cd08263         236 TVNAA--KEDAVAAIREITG--GRGVDVVVEALGKPETFKLALDVVRDGGRAVVVGLAPGGATAEIPITRLVRRGIKIIG  311 (367)
T ss_pred             EecCC--cccHHHHHHHHhC--CCCCCEEEEeCCCHHHHHHHHHHHhcCCEEEEEccCCCCCccccCHHHHhhCCeEEEe
Confidence            77753  3466666665532  57899999999976577889999999999999975432  223333344467888877


Q ss_pred             eccc--CCcHHHHHHHHHcCCCCCCCceEEEecCChhhHHHHHHHHhcCCCceEEEEe
Q 017868          309 VFRY--KNTWPLCLELLRSGKIDVKPLVTHRFGFSQKEVEEAFETSARGGTAIKVMFN  364 (365)
Q Consensus       309 ~~~~--~~~~~~~~~~l~~g~~~~~~~~~~~~~~~~~~~~~a~~~~~~~~~~gk~vi~  364 (365)
                      +...  .+.+++++++++++.+.+.+.+++.|++  +++.+|++.++++...||+|++
T Consensus       312 ~~~~~~~~~~~~~~~ll~~~~l~~~~~~~~~~~~--~~~~~a~~~~~~~~~~g~~~~~  367 (367)
T cd08263         312 SYGARPRQDLPELVGLAASGKLDPEALVTHKYKL--EEINEAYENLRKGLIHGRAIVE  367 (367)
T ss_pred             cCCCCcHHHHHHHHHHHHcCCCCcccceeEEecH--HHHHHHHHHHhcCCccceeeeC
Confidence            6543  3578899999999998644456788888  9999999999999889999984

NAD(P)(H)-dependent oxidoreductases are the major enzymes in the interconversion of alcohols and aldehydes, or ketones. Alcohol dehydrogenase in the liver converts ethanol and NAD+ to acetaldehyde and NADH, while in yeast and some other microorganisms ADH catalyzes the conversion acetaldehyde to ethanol in alcoholic fermentation. ADH is a member of the medium chain alcohol dehydrogenase family (MDR), which have a NAD(P)(H)-binding domain in a Rossmann fold of a beta-alpha form. The NAD(H)-binding region is comprised of 2 structurally similar halves, each of which contacts a mononucleotide. A GxGxxG motif after the first mononucleotide contact half allows the close contact of the coenzyme with the ADH backbone. The N-terminal catalytic domain has a distant homology to GroES. These proteins typically form dimers (typically higher plants, mammals) or tetramers (yeast, bacteria), and have 2 tightly bound zinc atoms per subu

>TIGR01751 crot-CoA-red crotonyl-CoA reductase

Probab=100.00  E-value=5e-40  Score=307.20  Aligned_cols=342  Identities=21%  Similarity=0.243  Sum_probs=274.6

Q ss_pred             hhcceeEEEec-----C-CceEEEEecCCCCCCCcEEEEEeeeeeCcccHhhhhccccCC------c-cCCCC-cccCcc
Q 017868           15 EEVNMAAWLLG-----V-NTLKIQPFELPSLGPYDVLVRMKAVGICGSDVHYLKTLRCAD------F-VVKEP-MVIGHE   80 (365)
Q Consensus        15 ~~~~~~~~~~~-----~-~~l~~~~~~~p~~~~~eVlI~v~~~~l~~~D~~~~~g~~~~~------~-~~~~p-~~~G~e   80 (365)
                      +.+|+|+++..     + +.+++.+.|.|.+.++||+||+.++++|..|.....+.....      + ....| .++|||
T Consensus         5 ~~~~~a~~~~~~~~~~~~~~~~~~~~~~p~l~~~evlV~v~~~gi~~~d~~~~~~~~~~~~~~~~~~~~~~~~~~v~G~e   84 (398)
T TIGR01751         5 PETMYAFAIREERDGDPRQAIQLEVVPVPELGPGEVLVAVMAAGVNYNNVWAALGEPVSTFAFLRKYGRDDLPFHIIGSD   84 (398)
T ss_pred             chhhhheEEecccCCCcccceEEeecCCCCCCCCeEEEEEEEEecCchhhhhhcCCccchhhhhcccCCCCCCceecccc
Confidence            45688888843     1 469999999999999999999999999999987665432100      0 01223 379999


Q ss_pred             ceEEEEEeCCCCCCCCCCCEEEEcCCcCCCCCccccCCCCCCCCCccccccCCCCcceeeEEeecCCceEECCCCCCcch
Q 017868           81 CAGVIEKVGSEVKTLVPGDRVALEPGISCWRCDHCKGGRYNLCPEMKFFATPPVHGSLANQVVHPADLCFKLPDNVSLEE  160 (365)
Q Consensus        81 ~~G~V~~vG~~v~~~~~Gd~V~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~v~~~~~~~iP~~~~~~~  160 (365)
                      ++|+|+++|++++.|++||+|++.+...|++|++|..+++++|.....++....+|+|+||+.+++++++++|+++++++
T Consensus        85 ~~G~V~~vG~~v~~~~~Gd~V~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~g~~ae~~~v~~~~~~~vP~~l~~~~  164 (398)
T TIGR01751        85 ASGVVWRVGPGVTRWKVGDEVVASCLQVDLTAPDGRVGDPMLSSEQRIWGYETNFGSFAEFALVKDYQLMPKPKHLTWEE  164 (398)
T ss_pred             eEEEEEEeCCCCCCCCCCCEEEEccccccCCchhhccCccccccccccccccCCCccceEEEEechHHeEECCCCCCHHH
Confidence            99999999999999999999999999999999999999999998776666655689999999999999999999999999


Q ss_pred             hccch-hhHHHHHHHH---hcCCCCCCEEEEEcC-CHHHHHHHHHHHHHCCCCeEEEEeCChhHHHHHHHcCCCEEEeCC
Q 017868          161 GAMCE-PLSVGLHACR---RANIGPETNVLIMGA-GPIGLVTMLGAPRAFGAPRIVIVDVDDYRLSVAKEIGADNIVKVS  235 (365)
Q Consensus       161 a~~~~-~~~~a~~~~~---~~~~~~g~~vlI~G~-g~~G~~ai~~l~~~~g~~~vi~v~~~~~~~~~~~~~g~~~~~~~~  235 (365)
                      ++.+. ...+||+++.   ..++.+|++|||+|+ |.+|+++++ +++.+|++ ++++++++++.++++++|++.+++..
T Consensus       165 aa~~~~~~~ta~~al~~~~~~~~~~g~~vlV~Ga~g~vG~~ai~-~ak~~G~~-vi~~~~~~~~~~~~~~~g~~~~v~~~  242 (398)
T TIGR01751       165 AACPGLTGATAYRQLVGWNPATVKPGDNVLIWGAAGGLGSYATQ-LARAGGGN-PVAVVSSPEKAEYCRELGAEAVIDRN  242 (398)
T ss_pred             HhhccchHHHHHHHHhhhhccCCCCCCEEEEEcCCcHHHHHHHH-HHHHcCCe-EEEEcCCHHHHHHHHHcCCCEEecCC
Confidence            88776 7888998874   377899999999997 999999999 99999995 56666888899999999999888754


Q ss_pred             CCc--------------------ccHHHHHHHHHHHhCCCceEEEeCCCCHHHHHHHHHhcccCCEEEEEccCCCC-ccc
Q 017868          236 TNL--------------------QDIAEEVEKIQKAMGTGIDVSFDCAGLNKTMSTALGATCAGGKVCLVGMGHHE-MTV  294 (365)
Q Consensus       236 ~~~--------------------~~~~~~i~~~~~~~~~~~d~vid~~g~~~~~~~~~~~l~~~G~~~~~g~~~~~-~~~  294 (365)
                      ...                    ..+...+.+++  .++++|++|||+|. ..+...+++++++|+++.+|..... ..+
T Consensus       243 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~--~~~g~d~vld~~g~-~~~~~~~~~l~~~G~~v~~g~~~~~~~~~  319 (398)
T TIGR01751       243 DFGHWGRLPDLNTQAPKEWTKSFKRFGKRIRELT--GGEDPDIVFEHPGR-ATFPTSVFVCRRGGMVVICGGTTGYNHDY  319 (398)
T ss_pred             CcchhhccccccccccchhhhcchhHHHHHHHHc--CCCCceEEEECCcH-HHHHHHHHhhccCCEEEEEccccCCCCCc
Confidence            310                    11223333332  25689999999996 5788899999999999999864332 334


Q ss_pred             cchHhhhcCcEEEeeccc-CCcHHHHHHHHHcCCCCCCCceEEEecCChhhHHHHHHHHhcCCCceEEEEeC
Q 017868          295 PLTPAAVREVDVVGVFRY-KNTWPLCLELLRSGKIDVKPLVTHRFGFSQKEVEEAFETSARGGTAIKVMFNL  365 (365)
Q Consensus       295 ~~~~~~~~~~~i~~~~~~-~~~~~~~~~~l~~g~~~~~~~~~~~~~~~~~~~~~a~~~~~~~~~~gk~vi~~  365 (365)
                      +...+..++.++.+.... .+.+++++++++++.+  .+.+++++++  +++.++++.+.++...||+|+++
T Consensus       320 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~l--~~~~~~~~~l--~~~~~a~~~~~~~~~~gkvvv~~  387 (398)
T TIGR01751       320 DNRYLWMRQKRIQGSHFANLREAWEANRLVAKGRI--DPTLSKVYPL--EEIGQAHQDVHRNHHQGNVAVLV  387 (398)
T ss_pred             CHHHHhhcccEEEccccCcHHHHHHHHHHHHCCCc--ccceeeEEcH--HHHHHHHHHHHcCCCCceEEEEe
Confidence            444556677777776533 3457889999999988  4557788888  99999999999999999999864

The enzyme modelled by this alignment is responsible for the conversion of crotonyl-CoA reductase to butyryl-CoA. In serine cycle methylotrophic bacteria this enzyme is involved in the process of acetyl-CoA to glyoxylate. In other bacteria the enzyme is used to produce butyrate for incorporation into polyketides such as tylosin from Streptomyces fradiae and coronatine from Pseudomonas syringae.

>cd08260 Zn_ADH6 Alcohol dehydrogenases of the MDR family

Probab=100.00  E-value=1.4e-39  Score=299.19  Aligned_cols=335  Identities=30%  Similarity=0.474  Sum_probs=277.6

Q ss_pred             ceeEEEecC-CceEEEEecCCCCCCCcEEEEEeeeeeCcccHhhhhccccCCccCCCCcccCccceEEEEEeCCCCCCCC
Q 017868           18 NMAAWLLGV-NTLKIQPFELPSLGPYDVLVRMKAVGICGSDVHYLKTLRCADFVVKEPMVIGHECAGVIEKVGSEVKTLV   96 (365)
Q Consensus        18 ~~~~~~~~~-~~l~~~~~~~p~~~~~eVlI~v~~~~l~~~D~~~~~g~~~~~~~~~~p~~~G~e~~G~V~~vG~~v~~~~   96 (365)
                      ||++++.++ .++++.+.+.|.+.++||+||+.++++|+.|+....|....   ..+|.++|+|++|+|+.+|++++.|+
T Consensus         1 m~a~~~~~~~~~~~~~~~~~~~~~~~~v~v~v~~~~i~~~d~~~~~g~~~~---~~~~~~~g~e~~G~V~~~G~~~~~~~   77 (345)
T cd08260           1 MRAAVYEEFGEPLEIREVPDPEPPPDGVVVEVEACGVCRSDWHGWQGHDPD---VTLPHVPGHEFAGVVVEVGEDVSRWR   77 (345)
T ss_pred             CeeEEEecCCCCcEEEEccCCCCCCCeEEEEEEEeeccHHHHHHhcCCCCC---CCCCeeeccceeEEEEEECCCCccCC
Confidence            578888764 46899999999999999999999999999999988775332   34578999999999999999999999


Q ss_pred             CCCEEEEcCCcCCCCCccccCCCCCCCCCccccccCCCCcceeeEEeecCC--ceEECCCCCCcchhccch-hhHHHHHH
Q 017868           97 PGDRVALEPGISCWRCDHCKGGRYNLCPEMKFFATPPVHGSLANQVVHPAD--LCFKLPDNVSLEEGAMCE-PLSVGLHA  173 (365)
Q Consensus        97 ~Gd~V~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~v~~~--~~~~iP~~~~~~~a~~~~-~~~~a~~~  173 (365)
                      +||+|++.+..+|++|++|+.+..++|.++...+.. ..|+|++|+.+++.  +++++|+++++++++.++ ...+||++
T Consensus        78 ~Gd~V~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~~g~~~~~~~v~~~~~~~~~iP~~~~~~~aa~l~~~~~ta~~~  156 (345)
T cd08260          78 VGDRVTVPFVLGCGTCPYCRAGDSNVCEHQVQPGFT-HPGSFAEYVAVPRADVNLVRLPDDVDFVTAAGLGCRFATAFRA  156 (345)
T ss_pred             CCCEEEECCCCCCCCCccccCcCcccCCCCcccccC-CCCcceeEEEcccccCceEECCCCCCHHHhhhhccchHHHHHH
Confidence            999999877788999999999999999987443332 46999999999974  899999999999888776 78899999


Q ss_pred             H-HhcCCCCCCEEEEEcCCHHHHHHHHHHHHHCCCCeEEEEeCChhHHHHHHHcCCCEEEeCCCCcccHHHHHHHHHHHh
Q 017868          174 C-RRANIGPETNVLIMGAGPIGLVTMLGAPRAFGAPRIVIVDVDDYRLSVAKEIGADNIVKVSTNLQDIAEEVEKIQKAM  252 (365)
Q Consensus       174 ~-~~~~~~~g~~vlI~G~g~~G~~ai~~l~~~~g~~~vi~v~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~i~~~~~~~  252 (365)
                      + +.+++.++++|+|+|+|.+|+++++ +++..|+ .++++++++++.+.++++|++.++++++ ..++...+..+.   
T Consensus       157 l~~~~~~~~~~~vlV~g~g~vg~~~~~-~a~~~G~-~vi~~~~~~~~~~~~~~~g~~~~i~~~~-~~~~~~~~~~~~---  230 (345)
T cd08260         157 LVHQARVKPGEWVAVHGCGGVGLSAVM-IASALGA-RVIAVDIDDDKLELARELGAVATVNASE-VEDVAAAVRDLT---  230 (345)
T ss_pred             HHHccCCCCCCEEEEECCCHHHHHHHH-HHHHcCC-eEEEEeCCHHHHHHHHHhCCCEEEcccc-chhHHHHHHHHh---
Confidence            7 5678999999999999999999999 9999999 5777778889999999999988877532 145656665543   


Q ss_pred             CCCceEEEeCCCCHHHHHHHHHhcccCCEEEEEccCCCC---ccccchHhhhcCcEEEeeccc-CCcHHHHHHHHHcCCC
Q 017868          253 GTGIDVSFDCAGLNKTMSTALGATCAGGKVCLVGMGHHE---MTVPLTPAAVREVDVVGVFRY-KNTWPLCLELLRSGKI  328 (365)
Q Consensus       253 ~~~~d~vid~~g~~~~~~~~~~~l~~~G~~~~~g~~~~~---~~~~~~~~~~~~~~i~~~~~~-~~~~~~~~~~l~~g~~  328 (365)
                      ++++|++||++|........+++++++|+++.+|.....   ..++...+..+++++.+.... .+.+++++++++++.+
T Consensus       231 ~~~~d~vi~~~g~~~~~~~~~~~l~~~g~~i~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~i  310 (345)
T cd08260         231 GGGAHVSVDALGIPETCRNSVASLRKRGRHVQVGLTLGEEAGVALPMDRVVARELEIVGSHGMPAHRYDAMLALIASGKL  310 (345)
T ss_pred             CCCCCEEEEcCCCHHHHHHHHHHhhcCCEEEEeCCcCCCCCccccCHHHHhhcccEEEeCCcCCHHHHHHHHHHHHcCCC
Confidence            238999999999766888999999999999999854322   233334455778888886544 5678999999999998


Q ss_pred             CCCCceEEEecCChhhHHHHHHHHhcCCCceEEEEe
Q 017868          329 DVKPLVTHRFGFSQKEVEEAFETSARGGTAIKVMFN  364 (365)
Q Consensus       329 ~~~~~~~~~~~~~~~~~~~a~~~~~~~~~~gk~vi~  364 (365)
                      ...+.+.+.+++  +++++|++.+.++...+|+|++
T Consensus       311 ~~~~~~~~~~~~--~~~~~a~~~~~~~~~~~~~v~~  344 (345)
T cd08260         311 DPEPLVGRTISL--DEAPDALAAMDDYATAGITVIT  344 (345)
T ss_pred             ChhhheeEEecH--HHHHHHHHHHHcCCCCceEEec
Confidence            544446778888  9999999999999999999875

NAD(P)(H)-dependent oxidoreductases are the major enzymes in the interconversion of alcohols and aldehydes, or ketones. This group has the characteristic catalytic and structural zinc sites of the zinc-dependent alcohol dehydrogenases. Alcohol dehydrogenase in the liver converts ethanol and NAD+ to acetaldehyde and NADH, while in yeast and some other microorganisms ADH catalyzes the conversion acetaldehyde to ethanol in alcoholic fermentation. ADH is a member of the medium chain alcohol dehydrogenase family (MDR), which has a NAD(P)(H)-binding domain in a Rossmann fold of a beta-alpha form. The NAD(H)-binding region is comprised of 2 structurally similar halves, each of which contacts a mononucleotide. A GxGxxG motif after the first mononucleotide contact half allows the close contact of the coenzyme with the ADH backbone. The N-terminal catalytic domain has a distant homology to GroES. These proteins typically form dimers (ty

>cd08282 PFDH_like Pseudomonas putida aldehyde-dismutating formaldehyde dehydrogenase (PFDH)

Probab=100.00  E-value=2.5e-39  Score=300.30  Aligned_cols=334  Identities=27%  Similarity=0.421  Sum_probs=270.1

Q ss_pred             ceeEEEecCCceEEEEecCCCC-CCCcEEEEEeeeeeCcccHhhhhccccCCccCCCCcccCccceEEEEEeCCCCCCCC
Q 017868           18 NMAAWLLGVNTLKIQPFELPSL-GPYDVLVRMKAVGICGSDVHYLKTLRCADFVVKEPMVIGHECAGVIEKVGSEVKTLV   96 (365)
Q Consensus        18 ~~~~~~~~~~~l~~~~~~~p~~-~~~eVlI~v~~~~l~~~D~~~~~g~~~~~~~~~~p~~~G~e~~G~V~~vG~~v~~~~   96 (365)
                      |+++++.++++++++++|+|++ +++||+|||.++++|+.|++...|...    ...|.++|||++|+|+++|++++.++
T Consensus         1 m~~~~~~~~~~~~~~~~~~p~~~~~~evlv~v~a~~i~~~D~~~~~g~~~----~~~p~~~g~e~~G~V~~vG~~v~~~~   76 (375)
T cd08282           1 MKAVVYGGPGNVAVEDVPDPKIEHPTDAIVRITTTAICGSDLHMYRGRTG----AEPGLVLGHEAMGEVEEVGSAVESLK   76 (375)
T ss_pred             CceEEEecCCceeEEeCCCCCCCCCCeEEEEEEEEeeCHHHHHHHcCCCC----CCCCceeccccEEEEEEeCCCCCcCC
Confidence            4677788888999999999996 799999999999999999998876532    34588999999999999999999999


Q ss_pred             CCCEEEEcCCcCCCCCccccCCCCCCCCCccc---------cccCCCCcceeeEEeecCC--ceEECCCCCCcch---hc
Q 017868           97 PGDRVALEPGISCWRCDHCKGGRYNLCPEMKF---------FATPPVHGSLANQVVHPAD--LCFKLPDNVSLEE---GA  162 (365)
Q Consensus        97 ~Gd~V~~~~~~~~~~~~~~~~~~~~~~~~~~~---------~~~~~~~g~~~~~~~v~~~--~~~~iP~~~~~~~---a~  162 (365)
                      +||+|+..+..+|+.|..|..++.++|.+..+         .+....+|+|+||+.++..  .++++|+++++++   ++
T Consensus        77 ~Gd~V~~~~~~~~g~~~~c~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~a~y~~v~~~~~~~~~lP~~~~~~~~~~~a  156 (375)
T cd08282          77 VGDRVVVPFNVACGRCRNCKRGLTGVCLTVNPGRAGGAYGYVDMGPYGGGQAEYLRVPYADFNLLKLPDRDGAKEKDDYL  156 (375)
T ss_pred             CCCEEEEeCCCCCCCCHHHHCcCcccCCCCCcccccccccccccCCCCCeeeeEEEeecccCcEEECCCCCChhhhhhee
Confidence            99999999999999999999999999975321         1122346999999999975  8999999999984   45


Q ss_pred             cch-hhHHHHHHHHhcCCCCCCEEEEEcCCHHHHHHHHHHHHHCCCCeEEEEeCChhHHHHHHHcCCCEEEeCCCCcccH
Q 017868          163 MCE-PLSVGLHACRRANIGPETNVLIMGAGPIGLVTMLGAPRAFGAPRIVIVDVDDYRLSVAKEIGADNIVKVSTNLQDI  241 (365)
Q Consensus       163 ~~~-~~~~a~~~~~~~~~~~g~~vlI~G~g~~G~~ai~~l~~~~g~~~vi~v~~~~~~~~~~~~~g~~~~~~~~~~~~~~  241 (365)
                      .+. .+.+||+++..+++++|++|||.|+|.+|++++| +++..|+..++++++++++.++++++|+. .+++  ..+++
T Consensus       157 ~~~~~~~ta~~a~~~~~~~~g~~vlI~g~g~vg~~~~~-~a~~~G~~~vi~~~~~~~~~~~~~~~g~~-~v~~--~~~~~  232 (375)
T cd08282         157 MLSDIFPTGWHGLELAGVQPGDTVAVFGAGPVGLMAAY-SAILRGASRVYVVDHVPERLDLAESIGAI-PIDF--SDGDP  232 (375)
T ss_pred             eecchHHHHHHHHHhcCCCCCCEEEEECCCHHHHHHHH-HHHHcCCCEEEEECCCHHHHHHHHHcCCe-Eecc--CcccH
Confidence            444 7889999997788999999999988999999999 99999986678898999999999999984 4443  23566


Q ss_pred             HHHHHHHHHHhCCCceEEEeCCCCHH-----------HHHHHHHhcccCCEEEEEccCCCC-------------ccccch
Q 017868          242 AEEVEKIQKAMGTGIDVSFDCAGLNK-----------TMSTALGATCAGGKVCLVGMGHHE-------------MTVPLT  297 (365)
Q Consensus       242 ~~~i~~~~~~~~~~~d~vid~~g~~~-----------~~~~~~~~l~~~G~~~~~g~~~~~-------------~~~~~~  297 (365)
                      .+.+.+..   ++++|+++||+|...           .+..++++++++|+++..|.....             ..+...
T Consensus       233 ~~~i~~~~---~~~~d~v~d~~g~~~~~~~~~~~~~~~~~~~~~~l~~~g~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~  309 (375)
T cd08282         233 VEQILGLE---PGGVDRAVDCVGYEARDRGGEAQPNLVLNQLIRVTRPGGGIGIVGVYVAEDPGAGDAAAKQGELSFDFG  309 (375)
T ss_pred             HHHHHHhh---CCCCCEEEECCCCcccccccccchHHHHHHHHHHhhcCcEEEEEeccCCcccccccccccCccccccHH
Confidence            66666543   367999999998652           478899999999999887643211             122333


Q ss_pred             HhhhcCcEEEeeccc-CCcHHHHHHHHHcCCCCCCCceEEEecCChhhHHHHHHHHhcCCCceEEEEeC
Q 017868          298 PAAVREVDVVGVFRY-KNTWPLCLELLRSGKIDVKPLVTHRFGFSQKEVEEAFETSARGGTAIKVMFNL  365 (365)
Q Consensus       298 ~~~~~~~~i~~~~~~-~~~~~~~~~~l~~g~~~~~~~~~~~~~~~~~~~~~a~~~~~~~~~~gk~vi~~  365 (365)
                      .+..++..+.+.... .+.+.+++++++++.+.+...+++.|++  +++++|++.+.++. .+|+|++.
T Consensus       310 ~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~l~~~~~~~~~~~l--~~~~~a~~~~~~~~-~~kvvv~~  375 (375)
T cd08282         310 LLWAKGLSFGTGQAPVKKYNRQLRDLILAGRAKPSFVVSHVISL--EDAPEAYARFDKRL-ETKVVIKP  375 (375)
T ss_pred             HHHhcCcEEEEecCCchhhHHHHHHHHHcCCCChHHcEEEEeeH--HHHHHHHHHHhcCC-ceEEEeCC
Confidence            455566666665443 5678889999999999544457899988  99999999999887 89999863

Formaldehyde dehydrogenase (FDH) is a member of the zinc-dependent/medium chain alcohol dehydrogenase family. Unlike typical FDH, Pseudomonas putida aldehyde-dismutating FDH (PFDH) is glutathione-independent. PFDH converts 2 molecules of aldehydes to corresponding carboxylic acid and alcohol. MDH family uses NAD(H) as a cofactor in the interconversion of alcohols and aldehydes, or ketones. Like the zinc-dependent alcohol dehydrogenases (ADH) of the medium chain alcohol dehydrogenase/reductase family (MDR), these tetrameric FDHs have a catalytic zinc that resides between the catalytic and NAD(H)binding domains and a structural zinc in a lobe of the catalytic domain. Unlike ADH, where NAD(P)(H) acts as a cofactor, NADH in FDH is a tightly bound redox cofactor (similar to nicotinamide proteins). The medium chain alcohol dehydrogenase family (MDR) has a NAD(P)(H)-binding domain in a Rossmann fo

>cd08236 sugar_DH NAD(P)-dependent sugar dehydrogenases

Probab=100.00  E-value=2.2e-39  Score=297.67  Aligned_cols=333  Identities=38%  Similarity=0.659  Sum_probs=276.4

Q ss_pred             ceeEEEecCCceEEEEecCCCCCCCcEEEEEeeeeeCcccHhhhhccccCCccCCCCcccCccceEEEEEeCCCCCCCCC
Q 017868           18 NMAAWLLGVNTLKIQPFELPSLGPYDVLVRMKAVGICGSDVHYLKTLRCADFVVKEPMVIGHECAGVIEKVGSEVKTLVP   97 (365)
Q Consensus        18 ~~~~~~~~~~~l~~~~~~~p~~~~~eVlI~v~~~~l~~~D~~~~~g~~~~~~~~~~p~~~G~e~~G~V~~vG~~v~~~~~   97 (365)
                      |+|+++.+.+.+.+++.++|++.++||+||+.++++|+.|+....+..    ....|.++|+|++|+|+.+|++++.|++
T Consensus         1 ~~a~~~~~~~~l~~~~~~~~~l~~~~v~v~v~~~~~n~~d~~~~~~~~----~~~~~~~~g~~~~G~V~~~g~~v~~~~~   76 (343)
T cd08236           1 MKALVLTGPGDLRYEDIPKPEPGPGEVLVKVKACGICGSDIPRYLGTG----AYHPPLVLGHEFSGTVEEVGSGVDDLAV   76 (343)
T ss_pred             CeeEEEecCCceeEEecCCCCCCCCeEEEEEEEEEECccchHhhcCCC----CCCCCcccCcceEEEEEEECCCCCcCCC
Confidence            578888888889999999999999999999999999999998877642    2345778999999999999999999999


Q ss_pred             CCEEEEcCCcCCCCCccccCCCCCCCCCccccccCCCCcceeeEEeecCCceEECCCCCCcchhccchhhHHHHHHHHhc
Q 017868           98 GDRVALEPGISCWRCDHCKGGRYNLCPEMKFFATPPVHGSLANQVVHPADLCFKLPDNVSLEEGAMCEPLSVGLHACRRA  177 (365)
Q Consensus        98 Gd~V~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~v~~~~~~~iP~~~~~~~a~~~~~~~~a~~~~~~~  177 (365)
                      ||+|++++...|+.|.+|..+....|++..+.+. ...|+|++|+.++++.++++|+++++++++.++++.+||+++...
T Consensus        77 Gd~V~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~~~g~~~~~~~~~~~~~~~lP~~~~~~~aa~~~~~~ta~~~l~~~  155 (343)
T cd08236          77 GDRVAVNPLLPCGKCEYCKKGEYSLCSNYDYIGS-RRDGAFAEYVSVPARNLIKIPDHVDYEEAAMIEPAAVALHAVRLA  155 (343)
T ss_pred             CCEEEEcCCCCCCCChhHHCcChhhCCCcceEec-ccCCcccceEEechHHeEECcCCCCHHHHHhcchHHHHHHHHHhc
Confidence            9999999888999999999999999988766654 367999999999999999999999999988887778999998778


Q ss_pred             CCCCCCEEEEEcCCHHHHHHHHHHHHHCCCCeEEEEeCChhHHHHHHHcCCCEEEeCCCCcccHHHHHHHHHHHhCCCce
Q 017868          178 NIGPETNVLIMGAGPIGLVTMLGAPRAFGAPRIVIVDVDDYRLSVAKEIGADNIVKVSTNLQDIAEEVEKIQKAMGTGID  257 (365)
Q Consensus       178 ~~~~g~~vlI~G~g~~G~~ai~~l~~~~g~~~vi~v~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~i~~~~~~~~~~~d  257 (365)
                      +++++++|||+|+|.+|+++++ +++.+|++.++++++++++.++++++|++.++++..  .. ...++...  .+.++|
T Consensus       156 ~~~~~~~vlI~g~g~~g~~~~~-lA~~~G~~~v~~~~~~~~~~~~l~~~g~~~~~~~~~--~~-~~~~~~~~--~~~~~d  229 (343)
T cd08236         156 GITLGDTVVVIGAGTIGLLAIQ-WLKILGAKRVIAVDIDDEKLAVARELGADDTINPKE--ED-VEKVRELT--EGRGAD  229 (343)
T ss_pred             CCCCCCEEEEECCCHHHHHHHH-HHHHcCCCEEEEEcCCHHHHHHHHHcCCCEEecCcc--cc-HHHHHHHh--CCCCCC
Confidence            8999999999988999999999 999999965888888888889999999988776543  33 45555443  256799


Q ss_pred             EEEeCCCCHHHHHHHHHhcccCCEEEEEccCCCCccc---cchHhhhcCcEEEeeccc------CCcHHHHHHHHHcCCC
Q 017868          258 VSFDCAGLNKTMSTALGATCAGGKVCLVGMGHHEMTV---PLTPAAVREVDVVGVFRY------KNTWPLCLELLRSGKI  328 (365)
Q Consensus       258 ~vid~~g~~~~~~~~~~~l~~~G~~~~~g~~~~~~~~---~~~~~~~~~~~i~~~~~~------~~~~~~~~~~l~~g~~  328 (365)
                      +++||+|....+..++++|+++|+++.+|.......+   ....+..++..+.+....      .+.+++++++++++.+
T Consensus       230 ~vld~~g~~~~~~~~~~~l~~~G~~v~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l  309 (343)
T cd08236         230 LVIEAAGSPATIEQALALARPGGKVVLVGIPYGDVTLSEEAFEKILRKELTIQGSWNSYSAPFPGDEWRTALDLLASGKI  309 (343)
T ss_pred             EEEECCCCHHHHHHHHHHhhcCCEEEEEcccCCCcccccCCHHHHHhcCcEEEEEeeccccccchhhHHHHHHHHHcCCC
Confidence            9999998777888999999999999999854332111   223345677777776432      4568889999999988


Q ss_pred             CCCCceEEEecCChhhHHHHHHHHhc-CCCceEEEE
Q 017868          329 DVKPLVTHRFGFSQKEVEEAFETSAR-GGTAIKVMF  363 (365)
Q Consensus       329 ~~~~~~~~~~~~~~~~~~~a~~~~~~-~~~~gk~vi  363 (365)
                      .+.+...+.+++  ++++++++.+.+ ....+|+|+
T Consensus       310 ~~~~~~~~~~~~--~~~~~~~~~~~~~~~~~~k~v~  343 (343)
T cd08236         310 KVEPLITHRLPL--EDGPAAFERLADREEFSGKVLL  343 (343)
T ss_pred             ChHHheeeeecH--HHHHHHHHHHHcCCCCeeEEeC
Confidence            533456677888  999999999998 677888875

This group contains proteins identified as sorbitol dehydrogenases and other sugar dehydrogenases of the medium-chain dehydrogenase/reductase family (MDR), which includes zinc-dependent alcohol dehydrogenase and related proteins. Sorbitol and aldose reductase are NAD(+) binding proteins of the polyol pathway, which interconverts glucose and fructose. Sorbitol dehydrogenase is tetrameric and has a single catalytic zinc per subunit. NAD(P)(H)-dependent oxidoreductases are the major enzymes in the interconversion of alcohols and aldehydes, or ketones. Related proteins include threonine dehydrogenase, formaldehyde dehydrogenase, and butanediol dehydrogenase. The medium chain alcohol dehydrogenase family (MDR) has a NAD(P)(H)-binding domain in a Rossmann fold of a beta-alpha form. The N-terminal region typically has an all-beta catalytic domain. These proteins typically form dimers (typically higher plants, mammals) or tetramers (yeast

>cd05283 CAD1 Cinnamyl alcohol dehydrogenases (CAD)

Probab=100.00  E-value=1.4e-39  Score=298.09  Aligned_cols=326  Identities=25%  Similarity=0.401  Sum_probs=270.0

Q ss_pred             eEEEec-CCceEEEEecCCCCCCCcEEEEEeeeeeCcccHhhhhccccCCccCCCCcccCccceEEEEEeCCCCCCCCCC
Q 017868           20 AAWLLG-VNTLKIQPFELPSLGPYDVLVRMKAVGICGSDVHYLKTLRCADFVVKEPMVIGHECAGVIEKVGSEVKTLVPG   98 (365)
Q Consensus        20 ~~~~~~-~~~l~~~~~~~p~~~~~eVlI~v~~~~l~~~D~~~~~g~~~~~~~~~~p~~~G~e~~G~V~~vG~~v~~~~~G   98 (365)
                      +.+.+. .++|++.+++.|++.++||+|||.++++|+.|+....|...   ...+|.++|||++|+|+++|+++++|++|
T Consensus         2 ~~~~~~~~~~~~~~~~~~p~~~~~evlirv~a~~i~~~d~~~~~g~~~---~~~~p~~~g~e~~G~V~~vG~~v~~~~~G   78 (337)
T cd05283           2 GYAARDASGKLEPFTFERRPLGPDDVDIKITYCGVCHSDLHTLRNEWG---PTKYPLVPGHEIVGIVVAVGSKVTKFKVG   78 (337)
T ss_pred             ceEEecCCCCceEEeccCCCCCCCeEEEEEEEecccchHHHHhcCCcC---CCCCCcccCcceeeEEEEECCCCcccCCC
Confidence            344443 37999999999999999999999999999999998887542   23458899999999999999999999999


Q ss_pred             CEEE-EcCCcCCCCCccccCCCCCCCCCccccc------cCCCCcceeeEEeecCCceEECCCCCCcchhccch-hhHHH
Q 017868           99 DRVA-LEPGISCWRCDHCKGGRYNLCPEMKFFA------TPPVHGSLANQVVHPADLCFKLPDNVSLEEGAMCE-PLSVG  170 (365)
Q Consensus        99 d~V~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~------~~~~~g~~~~~~~v~~~~~~~iP~~~~~~~a~~~~-~~~~a  170 (365)
                      |+|+ .....+|++|.+|..+..++|+...+.+      .....|+|+||+.++++.++++|+++++++++.+. ...+|
T Consensus        79 d~V~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~v~~~~~~~lp~~~~~~~aa~l~~~~~ta  158 (337)
T cd05283          79 DRVGVGCQVDSCGTCEQCKSGEEQYCPKGVVTYNGKYPDGTITQGGYADHIVVDERFVFKIPEGLDSAAAAPLLCAGITV  158 (337)
T ss_pred             CEEEEecCCCCCCCCccccCCchhcCcchhhcccccccCCCcCCCcceeEEEechhheEECCCCCCHHHhhhhhhHHHHH
Confidence            9997 5556689999999999999998866542      12346999999999999999999999999888775 67889


Q ss_pred             HHHHHhcCCCCCCEEEEEcCCHHHHHHHHHHHHHCCCCeEEEEeCChhHHHHHHHcCCCEEEeCCCCcccHHHHHHHHHH
Q 017868          171 LHACRRANIGPETNVLIMGAGPIGLVTMLGAPRAFGAPRIVIVDVDDYRLSVAKEIGADNIVKVSTNLQDIAEEVEKIQK  250 (365)
Q Consensus       171 ~~~~~~~~~~~g~~vlI~G~g~~G~~ai~~l~~~~g~~~vi~v~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~i~~~~~  250 (365)
                      |++++...+++|++++|.|+|.+|+++++ +++..|+ .++.+++++++.++++++|++.+++...  .++   .+.   
T Consensus       159 ~~~~~~~~~~~g~~vlV~g~g~vG~~~~~-~a~~~G~-~v~~~~~~~~~~~~~~~~g~~~vi~~~~--~~~---~~~---  228 (337)
T cd05283         159 YSPLKRNGVGPGKRVGVVGIGGLGHLAVK-FAKALGA-EVTAFSRSPSKKEDALKLGADEFIATKD--PEA---MKK---  228 (337)
T ss_pred             HHHHHhcCCCCCCEEEEECCcHHHHHHHH-HHHHcCC-eEEEEcCCHHHHHHHHHcCCcEEecCcc--hhh---hhh---
Confidence            99987777899999999888999999999 9999999 6788888889999999999888776432  222   111   


Q ss_pred             HhCCCceEEEeCCCCHHHHHHHHHhcccCCEEEEEccCCCCccccchHhhhcCcEEEeeccc-CCcHHHHHHHHHcCCCC
Q 017868          251 AMGTGIDVSFDCAGLNKTMSTALGATCAGGKVCLVGMGHHEMTVPLTPAAVREVDVVGVFRY-KNTWPLCLELLRSGKID  329 (365)
Q Consensus       251 ~~~~~~d~vid~~g~~~~~~~~~~~l~~~G~~~~~g~~~~~~~~~~~~~~~~~~~i~~~~~~-~~~~~~~~~~l~~g~~~  329 (365)
                       .+.++|+++||+|.......++++++++|+++.+|.......++...+..+++++.+.... .+.+++++++++++.+ 
T Consensus       229 -~~~~~d~v~~~~g~~~~~~~~~~~l~~~G~~v~~g~~~~~~~~~~~~~~~~~~~i~~~~~~~~~~~~~~~~~~~~~~l-  306 (337)
T cd05283         229 -AAGSLDLIIDTVSASHDLDPYLSLLKPGGTLVLVGAPEEPLPVPPFPLIFGRKSVAGSLIGGRKETQEMLDFAAEHGI-  306 (337)
T ss_pred             -ccCCceEEEECCCCcchHHHHHHHhcCCCEEEEEeccCCCCccCHHHHhcCceEEEEecccCHHHHHHHHHHHHhCCC-
Confidence             2578999999999765678999999999999999865433344445556789999987755 5678899999999998 


Q ss_pred             CCCceEEEecCChhhHHHHHHHHhcCCCceEEEEe
Q 017868          330 VKPLVTHRFGFSQKEVEEAFETSARGGTAIKVMFN  364 (365)
Q Consensus       330 ~~~~~~~~~~~~~~~~~~a~~~~~~~~~~gk~vi~  364 (365)
                       .+.+ +.|++  +++++|++.+.+++..||+|++
T Consensus       307 -~~~~-~~~~~--~~~~~a~~~~~~~~~~~k~v~~  337 (337)
T cd05283         307 -KPWV-EVIPM--DGINEALERLEKGDVRYRFVLD  337 (337)
T ss_pred             -ccce-EEEEH--HHHHHHHHHHHcCCCcceEeeC
Confidence             3443 67888  9999999999999999999874

Cinnamyl alcohol dehydrogenases (CAD), members of the medium chain dehydrogenase/reductase family, reduce cinnamaldehydes to cinnamyl alcohols in the last step of monolignal metabolism in plant cells walls. CAD binds 2 zinc ions and is NADPH- dependent. CAD family members are also found in non-plant species, e.g. in yeast where they have an aldehyde reductase activity. The medium chain dehydrogenases/reductase (MDR)/zinc-dependent alcohol dehydrogenase-like family, which contains the zinc-dependent alcohol dehydrogenase (ADH-Zn) and related proteins, is a diverse group of proteins related to the first identified member, class I mammalian ADH. MDRs display a broad range of activities and are distinguished from the smaller short chain dehydrogenases (~ 250 amino acids vs. the ~ 350 amino acids of the MDR). The MDR proteins have 2 domains: a C-terminal NAD(P) binding-Rossmann fold domain of a beta-alpha form and an N-terminal catalytic

>cd05281 TDH Threonine dehydrogenase

Probab=100.00  E-value=2.6e-39  Score=296.86  Aligned_cols=337  Identities=32%  Similarity=0.556  Sum_probs=272.6

Q ss_pred             ceeEEEecCC-ceEEEEecCCCCCCCcEEEEEeeeeeCcccHhhhhccccCCccCCCCcccCccceEEEEEeCCCCCCCC
Q 017868           18 NMAAWLLGVN-TLKIQPFELPSLGPYDVLVRMKAVGICGSDVHYLKTLRCADFVVKEPMVIGHECAGVIEKVGSEVKTLV   96 (365)
Q Consensus        18 ~~~~~~~~~~-~l~~~~~~~p~~~~~eVlI~v~~~~l~~~D~~~~~g~~~~~~~~~~p~~~G~e~~G~V~~vG~~v~~~~   96 (365)
                      ||++++..++ .+++.+.+.|.|.++|++|||.++++|+.|+....+..........|.++|+|++|+|+.+|++++.++
T Consensus         1 ~~~~~~~~~~~~~~~~~~~~~~~~~~~v~V~v~~~~~~~~d~~~~~~~~~~~~~~~~~~~~g~e~~G~V~~~G~~v~~~~   80 (341)
T cd05281           1 MKAIVKTKAGPGAELVEVPVPKPGPGEVLIKVLAASICGTDVHIYEWDEWAQSRIKPPLIFGHEFAGEVVEVGEGVTRVK   80 (341)
T ss_pred             CcceEEecCCCceEEEeCCCCCCCCCeEEEEEEEEEEcccchHHHcCCCCccccCCCCcccccceEEEEEEECCCCCCCC
Confidence            4677777554 699999999999999999999999999999887543211111134577899999999999999999999


Q ss_pred             CCCEEEEcCCcCCCCCccccCCCCCCCCCccccccCCCCcceeeEEeecCCceEECCCCCCcchhccchhhHHHHHHHHh
Q 017868           97 PGDRVALEPGISCWRCDHCKGGRYNLCPEMKFFATPPVHGSLANQVVHPADLCFKLPDNVSLEEGAMCEPLSVGLHACRR  176 (365)
Q Consensus        97 ~Gd~V~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~v~~~~~~~iP~~~~~~~a~~~~~~~~a~~~~~~  176 (365)
                      +||+|++.+..+|+.|.+|..+++++|+...+.+. ...|+|++|++++++.++++|+++++++++...++.++++++. 
T Consensus        81 ~Gd~V~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~~~g~~~~~v~v~~~~~~~lP~~~~~~~a~~~~~~~~a~~~~~-  158 (341)
T cd05281          81 VGDYVSAETHIVCGKCYQCRTGNYHVCQNTKILGV-DTDGCFAEYVVVPEENLWKNDKDIPPEIASIQEPLGNAVHTVL-  158 (341)
T ss_pred             CCCEEEECCccCCCCChHHHCcCcccCcccceEec-cCCCcceEEEEechHHcEECcCCCCHHHhhhhhHHHHHHHHHH-
Confidence            99999999889999999999999999987655554 3569999999999999999999999877766668888888765 


Q ss_pred             cCCCCCCEEEEEcCCHHHHHHHHHHHHHCCCCeEEEEeCChhHHHHHHHcCCCEEEeCCCCcccHHHHHHHHHHHhCCCc
Q 017868          177 ANIGPETNVLIMGAGPIGLVTMLGAPRAFGAPRIVIVDVDDYRLSVAKEIGADNIVKVSTNLQDIAEEVEKIQKAMGTGI  256 (365)
Q Consensus       177 ~~~~~g~~vlI~G~g~~G~~ai~~l~~~~g~~~vi~v~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~i~~~~~~~~~~~  256 (365)
                      ...++|++|||+|+|.+|+++++ +++.+|++++++++++++|.++++++|++++++++  ..++. .+++...  ++++
T Consensus       159 ~~~~~g~~vlV~g~g~vg~~~~~-la~~~G~~~v~~~~~~~~~~~~~~~~g~~~~~~~~--~~~~~-~~~~~~~--~~~v  232 (341)
T cd05281         159 AGDVSGKSVLITGCGPIGLMAIA-VAKAAGASLVIASDPNPYRLELAKKMGADVVINPR--EEDVV-EVKSVTD--GTGV  232 (341)
T ss_pred             hcCCCCCEEEEECCCHHHHHHHH-HHHHcCCcEEEEECCCHHHHHHHHHhCcceeeCcc--cccHH-HHHHHcC--CCCC
Confidence            34578999999988999999999 99999986677888889999999999998776643  34555 5555432  5789


Q ss_pred             eEEEeCCCCHHHHHHHHHhcccCCEEEEEccCCCCccccc-hHhhhcCcEEEeeccc--CCcHHHHHHHHHcCCCCCCCc
Q 017868          257 DVSFDCAGLNKTMSTALGATCAGGKVCLVGMGHHEMTVPL-TPAAVREVDVVGVFRY--KNTWPLCLELLRSGKIDVKPL  333 (365)
Q Consensus       257 d~vid~~g~~~~~~~~~~~l~~~G~~~~~g~~~~~~~~~~-~~~~~~~~~i~~~~~~--~~~~~~~~~~l~~g~~~~~~~  333 (365)
                      |++||++|.......++++|+++|+++.+|.......... .....+++++.+....  .+.+.+++++++++.+.+.+.
T Consensus       233 d~vld~~g~~~~~~~~~~~l~~~G~~v~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~l~~~~~  312 (341)
T cd05281         233 DVVLEMSGNPKAIEQGLKALTPGGRVSILGLPPGPVDIDLNNLVIFKGLTVQGITGRKMFETWYQVSALLKSGKVDLSPV  312 (341)
T ss_pred             CEEEECCCCHHHHHHHHHHhccCCEEEEEccCCCCcccccchhhhccceEEEEEecCCcchhHHHHHHHHHcCCCChhHh
Confidence            9999999887788899999999999999875433222222 2356677777765532  456788999999999865556


Q ss_pred             eEEEecCChhhHHHHHHHHhcCCCceEEEEeC
Q 017868          334 VTHRFGFSQKEVEEAFETSARGGTAIKVMFNL  365 (365)
Q Consensus       334 ~~~~~~~~~~~~~~a~~~~~~~~~~gk~vi~~  365 (365)
                      +.+.+++  +++.+|++.+.++. .||+|++.
T Consensus       313 ~~~~~~~--~~~~~a~~~~~~~~-~gk~vv~~  341 (341)
T cd05281         313 ITHKLPL--EDFEEAFELMRSGK-CGKVVLYP  341 (341)
T ss_pred             eEEEecH--HHHHHHHHHHhcCC-CceEEecC
Confidence            6777888  99999999999988 99999863

L-threonine dehydrogenase (TDH) catalyzes the zinc-dependent formation of 2-amino-3-ketobutyrate from L-threonine via NAD(H)- dependent oxidation. THD is a member of the zinc-requiring, medium chain NAD(H)-dependent alcohol dehydrogenase family (MDR). MDRs have a NAD(P)(H)-binding domain in a Rossmann fold of a beta-alpha form. NAD(P)(H)-dependent oxidoreductases are the major enzymes in the interconversion of alcohols and aldehydes, or ketones. The N-terminal region typically has an all-beta catalytic domain. These proteins typically form dimers (typically higher plants, mammals) or tetramers (yeast, bacteria) and have 2 tightly bound zinc atoms per subunit. Sorbitol and aldose reductase are NAD(+) binding proteins of the polyol pathway, which interconverts glucose and fructose.

>cd08291 ETR_like_1 2-enoyl thioester reductase (ETR) like proteins, child 1

Probab=100.00  E-value=7e-40  Score=298.49  Aligned_cols=305  Identities=21%  Similarity=0.272  Sum_probs=246.3

Q ss_pred             ceeEEEecCC------ceEEEEecCCCCCCCcEEEEEeeeeeCcccHhhhhccccCCccCCCCcccCccceEEEEEeCCC
Q 017868           18 NMAAWLLGVN------TLKIQPFELPSLGPYDVLVRMKAVGICGSDVHYLKTLRCADFVVKEPMVIGHECAGVIEKVGSE   91 (365)
Q Consensus        18 ~~~~~~~~~~------~l~~~~~~~p~~~~~eVlI~v~~~~l~~~D~~~~~g~~~~~~~~~~p~~~G~e~~G~V~~vG~~   91 (365)
                      |+++++.+++      .+++.++|.|.|+++||+|||.++++|+.|+....|.+..  ...+|.++|||++|+|+++|++
T Consensus         1 m~a~~~~~~~~~~~~~~~~~~~~~~p~~~~~evlv~v~~~gi~~~d~~~~~g~~~~--~~~~p~v~G~e~~G~V~~vG~~   78 (324)
T cd08291           1 MKALLLEEYGKPLEVKELSLPEPEVPEPGPGEVLIKVEAAPINPSDLGFLKGQYGS--TKALPVPPGFEGSGTVVAAGGG   78 (324)
T ss_pred             CeEEEEeecCCCccccEEEecccCCCCCCCCeEEEEEEEccCCHHHHHHhcCcCCC--CCCCCcCCCcceEEEEEEECCC
Confidence            5778877543      5888899999999999999999999999999988775322  1346889999999999999999


Q ss_pred             CCC-CCCCCEEEEcCCcCCCCCccccCCCCCCCCCccccccCCCCcceeeEEeecCCceEECCCCCCcchhccch-hhHH
Q 017868           92 VKT-LVPGDRVALEPGISCWRCDHCKGGRYNLCPEMKFFATPPVHGSLANQVVHPADLCFKLPDNVSLEEGAMCE-PLSV  169 (365)
Q Consensus        92 v~~-~~~Gd~V~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~v~~~~~~~iP~~~~~~~a~~~~-~~~~  169 (365)
                      +++ |++||+|++.+.                           .+|+|+||+.++++.++++|+++++++++.++ ...|
T Consensus        79 v~~~~~vGd~V~~~~~---------------------------~~g~~a~~~~v~~~~~~~iP~~~~~~~aa~~~~~~~t  131 (324)
T cd08291          79 PLAQSLIGKRVAFLAG---------------------------SYGTYAEYAVADAQQCLPLPDGVSFEQGASSFVNPLT  131 (324)
T ss_pred             ccccCCCCCEEEecCC---------------------------CCCcchheeeecHHHeEECCCCCCHHHHhhhcccHHH
Confidence            996 999999987521                           14899999999999999999999999988654 5667


Q ss_pred             HHHHHHhcCCCCCCEEEEE-c-CCHHHHHHHHHHHHHCCCCeEEEEeCChhHHHHHHHcCCCEEEeCCCCcccHHHHHHH
Q 017868          170 GLHACRRANIGPETNVLIM-G-AGPIGLVTMLGAPRAFGAPRIVIVDVDDYRLSVAKEIGADNIVKVSTNLQDIAEEVEK  247 (365)
Q Consensus       170 a~~~~~~~~~~~g~~vlI~-G-~g~~G~~ai~~l~~~~g~~~vi~v~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~i~~  247 (365)
                      ||.+++..+. ++++++|+ | +|++|++++| +++.+|+ .++++++++++.++++++|+++++++..  .++.+.+++
T Consensus       132 a~~~~~~~~~-~~~~vlv~~~g~g~vG~~a~q-~a~~~G~-~vi~~~~~~~~~~~~~~~g~~~~i~~~~--~~~~~~v~~  206 (324)
T cd08291         132 ALGMLETARE-EGAKAVVHTAAASALGRMLVR-LCKADGI-KVINIVRRKEQVDLLKKIGAEYVLNSSD--PDFLEDLKE  206 (324)
T ss_pred             HHHHHHhhcc-CCCcEEEEccCccHHHHHHHH-HHHHcCC-EEEEEeCCHHHHHHHHHcCCcEEEECCC--ccHHHHHHH
Confidence            7755555555 56667665 4 5999999999 9999999 5788888999999999999999887543  577777776


Q ss_pred             HHHHhCCCceEEEeCCCCHHHHHHHHHhcccCCEEEEEccCCCC-c-cccchHhhhcCcEEEeeccc-------CCcHHH
Q 017868          248 IQKAMGTGIDVSFDCAGLNKTMSTALGATCAGGKVCLVGMGHHE-M-TVPLTPAAVREVDVVGVFRY-------KNTWPL  318 (365)
Q Consensus       248 ~~~~~~~~~d~vid~~g~~~~~~~~~~~l~~~G~~~~~g~~~~~-~-~~~~~~~~~~~~~i~~~~~~-------~~~~~~  318 (365)
                      .+.  +.++|++||++|.. .....+.+++++|+++.+|..... . .++...+..+++++.+++..       .+.+++
T Consensus       207 ~~~--~~~~d~vid~~g~~-~~~~~~~~l~~~G~~v~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  283 (324)
T cd08291         207 LIA--KLNATIFFDAVGGG-LTGQILLAMPYGSTLYVYGYLSGKLDEPIDPVDLIFKNKSIEGFWLTTWLQKLGPEVVKK  283 (324)
T ss_pred             HhC--CCCCcEEEECCCcH-HHHHHHHhhCCCCEEEEEEecCCCCcccCCHHHHhhcCcEEEEEEHHHhhcccCHHHHHH
Confidence            643  56899999999976 567789999999999999854322 1 23344567788888887643       235778


Q ss_pred             HHHHHHcCCCCCCCceEEEecCChhhHHHHHHHHhcCCCceEEEEe
Q 017868          319 CLELLRSGKIDVKPLVTHRFGFSQKEVEEAFETSARGGTAIKVMFN  364 (365)
Q Consensus       319 ~~~~l~~g~~~~~~~~~~~~~~~~~~~~~a~~~~~~~~~~gk~vi~  364 (365)
                      ++++++ +.+  ++.++++|+|  +++.+|++.+.++...||+++.
T Consensus       284 ~~~~~~-~~~--~~~i~~~~~l--~~~~~a~~~~~~~~~~Gkvv~~  324 (324)
T cd08291         284 LKKLVK-TEL--KTTFASRYPL--ALTLEAIAFYSKNMSTGKKLLI  324 (324)
T ss_pred             HHHHHh-Ccc--ccceeeEEcH--HHHHHHHHHHHhCCCCCeEEeC
Confidence            888887 766  7788899999  9999999999999899999873

2-enoyl thioester reductase (ETR) like proteins. ETR catalyzes the NADPH-dependent conversion of trans-2-enoyl acyl carrier protein/coenzyme A (ACP/CoA) to acyl-(ACP/CoA) in fatty acid synthesis. 2-enoyl thioester reductase activity has been linked in Candida tropicalis as essential in maintaining mitiochondrial respiratory function. This ETR family is a part of the medium chain dehydrogenase/reductase family, but lack the zinc coordination sites characteristic of the 2-enoyl thioester reductase (ETR) like proteins. ETR catalyzes the NADPH-dependent dependent conversion of trans-2-enoyl acyl carrier protein/coenzyme A (ACP/CoA) to acyl-(ACP/CoA) in fatty acid synthesis. 2-enoyl thioester reductase activity has been linked in Candida tropicalis as essential in maintaining mitiochondrial respiratory function. This ETR family is a part of the medium chain dehydrogenase/reductase family, but lack the zinc coordin

>cd08234 threonine_DH_like L-threonine dehydrogenase

Probab=100.00  E-value=3.8e-39  Score=295.05  Aligned_cols=331  Identities=37%  Similarity=0.610  Sum_probs=276.5

Q ss_pred             ceeEEEecCCceEEEEecCCCCCCCcEEEEEeeeeeCcccHhhhhccccCCccCCCCcccCccceEEEEEeCCCCCCCCC
Q 017868           18 NMAAWLLGVNTLKIQPFELPSLGPYDVLVRMKAVGICGSDVHYLKTLRCADFVVKEPMVIGHECAGVIEKVGSEVKTLVP   97 (365)
Q Consensus        18 ~~~~~~~~~~~l~~~~~~~p~~~~~eVlI~v~~~~l~~~D~~~~~g~~~~~~~~~~p~~~G~e~~G~V~~vG~~v~~~~~   97 (365)
                      ||++++.+++.+++.+.+.|++.++||+|||.++++|+.|+....|...    ..+|.++|+|++|+|+.+|++++++++
T Consensus         1 ~~a~~~~~~~~~~~~~~~~~~l~~~~v~v~v~~~~l~~~d~~~~~g~~~----~~~p~~~g~~~~G~v~~vG~~v~~~~~   76 (334)
T cd08234           1 MKALVYEGPGELEVEEVPVPEPGPDEVLIKVAACGICGTDLHIYEGEFG----AAPPLVPGHEFAGVVVAVGSKVTGFKV   76 (334)
T ss_pred             CeeEEecCCCceEEEeccCCCCCCCeEEEEEEEEeEchhhhHHhcCCCC----CCCCcccccceEEEEEEeCCCCCCCCC
Confidence            5788888888999999999999999999999999999999998876532    236789999999999999999999999


Q ss_pred             CCEEEEcCCcCCCCCccccCCCCCCCCCccccccCCCCcceeeEEeecCCceEECCCCCCcchhccchhhHHHHHHHHhc
Q 017868           98 GDRVALEPGISCWRCDHCKGGRYNLCPEMKFFATPPVHGSLANQVVHPADLCFKLPDNVSLEEGAMCEPLSVGLHACRRA  177 (365)
Q Consensus        98 Gd~V~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~v~~~~~~~iP~~~~~~~a~~~~~~~~a~~~~~~~  177 (365)
                      ||+|++.+...|+.|.+|..+++++|+.....+. ...|+|++|+.+++++++++|+++++.+++.+.++.+++++++.+
T Consensus        77 Gd~V~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~~~g~~~~~~~v~~~~~~~lP~~~~~~~aa~~~~~~~a~~~l~~~  155 (334)
T cd08234          77 GDRVAVDPNIYCGECFYCRRGRPNLCENLTAVGV-TRNGGFAEYVVVPAKQVYKIPDNLSFEEAALAEPLSCAVHGLDLL  155 (334)
T ss_pred             CCEEEEcCCcCCCCCccccCcChhhCCCcceecc-CCCCcceeEEEecHHHcEECcCCCCHHHHhhhhHHHHHHHHHHhc
Confidence            9999999999999999999999999998765433 246999999999999999999999999988766777888888778


Q ss_pred             CCCCCCEEEEEcCCHHHHHHHHHHHHHCCCCeEEEEeCChhHHHHHHHcCCCEEEeCCCCcccHHHHHHHHHHHhCCCce
Q 017868          178 NIGPETNVLIMGAGPIGLVTMLGAPRAFGAPRIVIVDVDDYRLSVAKEIGADNIVKVSTNLQDIAEEVEKIQKAMGTGID  257 (365)
Q Consensus       178 ~~~~g~~vlI~G~g~~G~~ai~~l~~~~g~~~vi~v~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~i~~~~~~~~~~~d  257 (365)
                      ++++|++|||+|+|.+|+++++ +++..|+++++++++++++.+.++++|++.++++..  .++... +   ...++++|
T Consensus       156 ~~~~g~~vlI~g~g~vg~~~~~-la~~~G~~~v~~~~~~~~~~~~~~~~g~~~~~~~~~--~~~~~~-~---~~~~~~vd  228 (334)
T cd08234         156 GIKPGDSVLVFGAGPIGLLLAQ-LLKLNGASRVTVAEPNEEKLELAKKLGATETVDPSR--EDPEAQ-K---EDNPYGFD  228 (334)
T ss_pred             CCCCCCEEEEECCCHHHHHHHH-HHHHcCCcEEEEECCCHHHHHHHHHhCCeEEecCCC--CCHHHH-H---HhcCCCCc
Confidence            8999999999988999999999 999999976888888999999999999887766533  333333 1   22367899


Q ss_pred             EEEeCCCCHHHHHHHHHhcccCCEEEEEccCCC--CccccchHhhhcCcEEEeecccCCcHHHHHHHHHcCCCCCCCceE
Q 017868          258 VSFDCAGLNKTMSTALGATCAGGKVCLVGMGHH--EMTVPLTPAAVREVDVVGVFRYKNTWPLCLELLRSGKIDVKPLVT  335 (365)
Q Consensus       258 ~vid~~g~~~~~~~~~~~l~~~G~~~~~g~~~~--~~~~~~~~~~~~~~~i~~~~~~~~~~~~~~~~l~~g~~~~~~~~~  335 (365)
                      ++||++|........+++++++|+++.+|....  ........+..+++.+.+.......+++++++++++.+.+.+.++
T Consensus       229 ~v~~~~~~~~~~~~~~~~l~~~G~~v~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~  308 (334)
T cd08234         229 VVIEATGVPKTLEQAIEYARRGGTVLVFGVYAPDARVSISPFEIFQKELTIIGSFINPYTFPRAIALLESGKIDVKGLVS  308 (334)
T ss_pred             EEEECCCChHHHHHHHHHHhcCCEEEEEecCCCCCCcccCHHHHHhCCcEEEEeccCHHHHHHHHHHHHcCCCChhhhEE
Confidence            999999876788899999999999999975432  222222233447788888766667789999999999986545567


Q ss_pred             EEecCChhhHHHHHHHHhcCCCceEEEE
Q 017868          336 HRFGFSQKEVEEAFETSARGGTAIKVMF  363 (365)
Q Consensus       336 ~~~~~~~~~~~~a~~~~~~~~~~gk~vi  363 (365)
                      ++|++  +++.+|++.+.+ ...+|+|+
T Consensus       309 ~~~~~--~~~~~a~~~~~~-~~~~k~vi  333 (334)
T cd08234         309 HRLPL--EEVPEALEGMRS-GGALKVVV  333 (334)
T ss_pred             EEecH--HHHHHHHHHHhc-CCceEEEe
Confidence            78888  999999999998 78899986

L-threonine dehydrogenase (TDH) catalyzes the zinc-dependent formation of 2-amino-3-ketobutyrate from L-threonine, via NAD(H)-dependent oxidation. THD is a member of the zinc-requiring, medium chain NAD(H)-dependent alcohol dehydrogenase family (MDR). MDRs have a NAD(P)(H)-binding domain in a Rossmann fold of a beta-alpha form. NAD(P)(H)-dependent oxidoreductases are the major enzymes in the interconversion of alcohols and aldehydes, or ketones. The N-terminal region typically has an all-beta catalytic domain. These proteins typically form dimers (typically higher plants, mammals) or tetramers (yeast, bacteria), and have 2 tightly bound zinc atoms per subunit. Sorbitol and aldose reductase are NAD(+) binding proteins of the polyol pathway, which interconverts glucose and fructose.

>TIGR00692 tdh L-threonine 3-dehydrogenase

Probab=100.00  E-value=3.1e-39  Score=296.16  Aligned_cols=329  Identities=33%  Similarity=0.609  Sum_probs=268.9

Q ss_pred             CceEEEEecCCCCCCCcEEEEEeeeeeCcccHhhhhccccCCccCCCCcccCccceEEEEEeCCCCCCCCCCCEEEEcCC
Q 017868           27 NTLKIQPFELPSLGPYDVLVRMKAVGICGSDVHYLKTLRCADFVVKEPMVIGHECAGVIEKVGSEVKTLVPGDRVALEPG  106 (365)
Q Consensus        27 ~~l~~~~~~~p~~~~~eVlI~v~~~~l~~~D~~~~~g~~~~~~~~~~p~~~G~e~~G~V~~vG~~v~~~~~Gd~V~~~~~  106 (365)
                      ..+++.+.|.|.|+++||+|||.++++|+.|+..+.+.........+|.++|+|++|+|+++|+++++|++||+|++.++
T Consensus         9 ~~~~l~~~~~p~~~~~ev~V~v~~~~~~~~d~~~~~~~~~~~~~~~~~~~~g~e~~G~V~~vG~~v~~~~~Gd~V~~~~~   88 (340)
T TIGR00692         9 YGAELTEVPVPEPGPGEVLIKVLATSICGTDVHIYNWDEWAQSRIKPPQVVGHEVAGEVVGIGPGVEGIKVGDYVSVETH   88 (340)
T ss_pred             CCcEEEECCCCCCCCCeEEEEEEEEEEcccCHHHHcCCCCCCCCCCCCcccccceEEEEEEECCCCCcCCCCCEEEECCc
Confidence            57889999999999999999999999999999876553211112345778999999999999999999999999999999


Q ss_pred             cCCCCCccccCCCCCCCCCccccccCCCCcceeeEEeecCCceEECCCCCCcchhccchhhHHHHHHHHhcCCCCCCEEE
Q 017868          107 ISCWRCDHCKGGRYNLCPEMKFFATPPVHGSLANQVVHPADLCFKLPDNVSLEEGAMCEPLSVGLHACRRANIGPETNVL  186 (365)
Q Consensus       107 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~v~~~~~~~iP~~~~~~~a~~~~~~~~a~~~~~~~~~~~g~~vl  186 (365)
                      ..|+.|..|..+..++|++..+++. ...|+|++|+.++++.++++|+++++++++...++.+|++++ ....++|++++
T Consensus        89 ~~~~~~~~~~~~~~~~~~~~~~~~~-~~~g~~~~~~~~~~~~~~~lp~~~~~~~a~~~~~~~~a~~~~-~~~~~~g~~vl  166 (340)
T TIGR00692        89 IVCGKCYACRRGQYHVCQNTKIFGV-DTDGCFAEYAVVPAQNIWKNPKSIPPEYATIQEPLGNAVHTV-LAGPISGKSVL  166 (340)
T ss_pred             CCCCCChhhhCcChhhCcCcceEee-cCCCcceeEEEeehHHcEECcCCCChHhhhhcchHHHHHHHH-HccCCCCCEEE
Confidence            9999999999999999998755543 356999999999999999999999987776556788888876 34578999999


Q ss_pred             EEcCCHHHHHHHHHHHHHCCCCeEEEEeCChhHHHHHHHcCCCEEEeCCCCcccHHHHHHHHHHHhCCCceEEEeCCCCH
Q 017868          187 IMGAGPIGLVTMLGAPRAFGAPRIVIVDVDDYRLSVAKEIGADNIVKVSTNLQDIAEEVEKIQKAMGTGIDVSFDCAGLN  266 (365)
Q Consensus       187 I~G~g~~G~~ai~~l~~~~g~~~vi~v~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~i~~~~~~~~~~~d~vid~~g~~  266 (365)
                      |.|+|.+|+++++ +++.+|+++++++++++++.++++++|++.++++..  .++.+.+.++..  +.++|+++|++|..
T Consensus       167 I~~~g~vg~~a~~-la~~~G~~~v~~~~~~~~~~~~~~~~g~~~~v~~~~--~~~~~~l~~~~~--~~~~d~vld~~g~~  241 (340)
T TIGR00692       167 VTGAGPIGLMAIA-VAKASGAYPVIVSDPNEYRLELAKKMGATYVVNPFK--EDVVKEVADLTD--GEGVDVFLEMSGAP  241 (340)
T ss_pred             EECCCHHHHHHHH-HHHHcCCcEEEEECCCHHHHHHHHHhCCcEEEcccc--cCHHHHHHHhcC--CCCCCEEEECCCCH
Confidence            9888999999999 999999976778888889999999999987776533  566666665532  57899999999877


Q ss_pred             HHHHHHHHhcccCCEEEEEccCCCCccccch-HhhhcCcEEEeeccc--CCcHHHHHHHHHcCCCCCCCceEEEecCChh
Q 017868          267 KTMSTALGATCAGGKVCLVGMGHHEMTVPLT-PAAVREVDVVGVFRY--KNTWPLCLELLRSGKIDVKPLVTHRFGFSQK  343 (365)
Q Consensus       267 ~~~~~~~~~l~~~G~~~~~g~~~~~~~~~~~-~~~~~~~~i~~~~~~--~~~~~~~~~~l~~g~~~~~~~~~~~~~~~~~  343 (365)
                      ..+...+++|+++|+++.+|........... .+.++.+++.+....  .+.+.+++++++++.+...+.+.+.+++  +
T Consensus       242 ~~~~~~~~~l~~~g~~v~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~l~~~~~~~~~~~l--~  319 (340)
T TIGR00692       242 KALEQGLQAVTPGGRVSLLGLPPGKVTIDFTNKVIFKGLTIYGITGRHMFETWYTVSRLIQSGKLDLDPIITHKFKF--D  319 (340)
T ss_pred             HHHHHHHHhhcCCCEEEEEccCCCCcccchhhhhhhcceEEEEEecCCchhhHHHHHHHHHcCCCChHHheeeeeeH--H
Confidence            7888999999999999999864332222223 466777887775432  3457889999999999644557788888  9


Q ss_pred             hHHHHHHHHhcCCCceEEEEeC
Q 017868          344 EVEEAFETSARGGTAIKVMFNL  365 (365)
Q Consensus       344 ~~~~a~~~~~~~~~~gk~vi~~  365 (365)
                      ++.++++.+.++. .||+|+++
T Consensus       320 ~~~~a~~~~~~~~-~gkvvv~~  340 (340)
T TIGR00692       320 KFEKGFELMRSGQ-TGKVILSL  340 (340)
T ss_pred             HHHHHHHHHhcCC-CceEEEeC
Confidence            9999999998876 49999986

E. coli His-90 modulates substrate specificity and is believed part of the active site.

>PRK09422 ethanol-active dehydrogenase/acetaldehyde-active reductase; Provisional

Probab=100.00  E-value=5.2e-39  Score=294.62  Aligned_cols=331  Identities=25%  Similarity=0.427  Sum_probs=269.7

Q ss_pred             ceeEEEecCCceE-EEEecCCCCCCCcEEEEEeeeeeCcccHhhhhccccCCccCCCCcccCccceEEEEEeCCCCCCCC
Q 017868           18 NMAAWLLGVNTLK-IQPFELPSLGPYDVLVRMKAVGICGSDVHYLKTLRCADFVVKEPMVIGHECAGVIEKVGSEVKTLV   96 (365)
Q Consensus        18 ~~~~~~~~~~~l~-~~~~~~p~~~~~eVlI~v~~~~l~~~D~~~~~g~~~~~~~~~~p~~~G~e~~G~V~~vG~~v~~~~   96 (365)
                      ||++++.+++... +++.|.|.+.++||+|||.++++|+.|+....|...    ...|.++|||++|+|+.+|+++++|+
T Consensus         1 mka~~~~~~~~~~~~~~~~~p~~~~~evlv~v~~~~i~~~d~~~~~g~~~----~~~~~~~g~e~~G~V~~~G~~v~~~~   76 (338)
T PRK09422          1 MKAAVVNKDHTGDVVVEKTLRPLKHGEALVKMEYCGVCHTDLHVANGDFG----DKTGRILGHEGIGIVKEVGPGVTSLK   76 (338)
T ss_pred             CeEEEecCCCCCceEEEecCCCCCCCeEEEEEEEEeechhHHHHHcCCCC----CCCCccCCcccceEEEEECCCCccCC
Confidence            6788888776555 899999999999999999999999999988876432    12367899999999999999999999


Q ss_pred             CCCEEEEc-CCcCCCCCccccCCCCCCCCCccccccCCCCcceeeEEeecCCceEECCCCCCcchhccch-hhHHHHHHH
Q 017868           97 PGDRVALE-PGISCWRCDHCKGGRYNLCPEMKFFATPPVHGSLANQVVHPADLCFKLPDNVSLEEGAMCE-PLSVGLHAC  174 (365)
Q Consensus        97 ~Gd~V~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~v~~~~~~~iP~~~~~~~a~~~~-~~~~a~~~~  174 (365)
                      +||+|++. ...+|+.|.+|..+..++|.+....+. ..+|+|+||+.++.++++++|+++++.+++.++ .+.+||+++
T Consensus        77 ~Gd~V~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~~~g~~~~~~~v~~~~~~~~p~~~~~~~aa~l~~~~~ta~~~~  155 (338)
T PRK09422         77 VGDRVSIAWFFEGCGHCEYCTTGRETLCRSVKNAGY-TVDGGMAEQCIVTADYAVKVPEGLDPAQASSITCAGVTTYKAI  155 (338)
T ss_pred             CCCEEEEccCCCCCCCChhhcCCCcccCCCccccCc-cccCcceeEEEEchHHeEeCCCCCCHHHeehhhcchhHHHHHH
Confidence            99999874 455799999999999999987654433 346999999999999999999999999988876 778899998


Q ss_pred             HhcCCCCCCEEEEEcCCHHHHHHHHHHHHH-CCCCeEEEEeCChhHHHHHHHcCCCEEEeCCCCcccHHHHHHHHHHHhC
Q 017868          175 RRANIGPETNVLIMGAGPIGLVTMLGAPRA-FGAPRIVIVDVDDYRLSVAKEIGADNIVKVSTNLQDIAEEVEKIQKAMG  253 (365)
Q Consensus       175 ~~~~~~~g~~vlI~G~g~~G~~ai~~l~~~-~g~~~vi~v~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~i~~~~~~~~  253 (365)
                      +.+++++|++|||+|+|++|+++++ +++. .|+ .++++++++++.++++++|++.++++.. ..++.+.+++..   +
T Consensus       156 ~~~~~~~g~~vlV~g~g~vG~~~~~-la~~~~g~-~v~~~~~~~~~~~~~~~~g~~~v~~~~~-~~~~~~~v~~~~---~  229 (338)
T PRK09422        156 KVSGIKPGQWIAIYGAGGLGNLALQ-YAKNVFNA-KVIAVDINDDKLALAKEVGADLTINSKR-VEDVAKIIQEKT---G  229 (338)
T ss_pred             HhcCCCCCCEEEEECCcHHHHHHHH-HHHHhCCC-eEEEEeCChHHHHHHHHcCCcEEecccc-cccHHHHHHHhc---C
Confidence            7788999999999999999999999 8887 598 5788889999999999999988776432 134555555442   3


Q ss_pred             CCceEEEeCCCCHHHHHHHHHhcccCCEEEEEccCCCCccccchHhhhcCcEEEeeccc-CCcHHHHHHHHHcCCCCCCC
Q 017868          254 TGIDVSFDCAGLNKTMSTALGATCAGGKVCLVGMGHHEMTVPLTPAAVREVDVVGVFRY-KNTWPLCLELLRSGKIDVKP  332 (365)
Q Consensus       254 ~~~d~vid~~g~~~~~~~~~~~l~~~G~~~~~g~~~~~~~~~~~~~~~~~~~i~~~~~~-~~~~~~~~~~l~~g~~~~~~  332 (365)
                       ++|+++.+.+....+..++++++.+|+++.+|............+..+..++.+.... .+.+++++++++++.+  .+
T Consensus       230 -~~d~vi~~~~~~~~~~~~~~~l~~~G~~v~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~g~l--~~  306 (338)
T PRK09422        230 -GAHAAVVTAVAKAAFNQAVDAVRAGGRVVAVGLPPESMDLSIPRLVLDGIEVVGSLVGTRQDLEEAFQFGAEGKV--VP  306 (338)
T ss_pred             -CCcEEEEeCCCHHHHHHHHHhccCCCEEEEEeeCCCCceecHHHHhhcCcEEEEecCCCHHHHHHHHHHHHhCCC--Cc
Confidence             6885555555567889999999999999999865433334444566678888776543 5678899999999988  34


Q ss_pred             ceEEEecCChhhHHHHHHHHhcCCCceEEEEeC
Q 017868          333 LVTHRFGFSQKEVEEAFETSARGGTAIKVMFNL  365 (365)
Q Consensus       333 ~~~~~~~~~~~~~~~a~~~~~~~~~~gk~vi~~  365 (365)
                      .+ +.+++  +++++|++.+.++...||+++++
T Consensus       307 ~v-~~~~~--~~~~~a~~~~~~~~~~gkvvv~~  336 (338)
T PRK09422        307 KV-QLRPL--EDINDIFDEMEQGKIQGRMVIDF  336 (338)
T ss_pred             cE-EEEcH--HHHHHHHHHHHcCCccceEEEec
Confidence            44 45677  99999999999999999999864

>cd08297 CAD3 Cinnamyl alcohol dehydrogenases (CAD)

Probab=100.00  E-value=9.2e-39  Score=293.35  Aligned_cols=334  Identities=28%  Similarity=0.441  Sum_probs=278.1

Q ss_pred             ceeEEEecCC--ceEEEEecCCCCCCCcEEEEEeeeeeCcccHhhhhccccCCccCCCCcccCccceEEEEEeCCCCCCC
Q 017868           18 NMAAWLLGVN--TLKIQPFELPSLGPYDVLVRMKAVGICGSDVHYLKTLRCADFVVKEPMVIGHECAGVIEKVGSEVKTL   95 (365)
Q Consensus        18 ~~~~~~~~~~--~l~~~~~~~p~~~~~eVlI~v~~~~l~~~D~~~~~g~~~~~~~~~~p~~~G~e~~G~V~~vG~~v~~~   95 (365)
                      |+++++.+++  .+++.+++.|.+.++||+||+.++++|+.|+....|.....  ...|.++|+|++|+|+++|++++.+
T Consensus         1 m~a~~~~~~~~~~~~~~~~~~~~~~~~~v~v~v~~~~i~~~d~~~~~g~~~~~--~~~~~~~g~e~~G~V~~vG~~~~~~   78 (341)
T cd08297           1 MKAAVVEEFGEKPYEVKDVPVPEPGPGEVLVKLEASGVCHTDLHAALGDWPVK--PKLPLIGGHEGAGVVVAVGPGVSGL   78 (341)
T ss_pred             CceEEeeccCCCCceEEEeeCCCCCCCeEEEEEEEeecchhHHHHHcCCCCcC--CCCCccCCcccceEEEEeCCCCCCC
Confidence            5788888665  89999999999999999999999999999998887654321  3446789999999999999999999


Q ss_pred             CCCCEEEEcC-CcCCCCCccccCCCCCCCCCccccccCCCCcceeeEEeecCCceEECCCCCCcchhccch-hhHHHHHH
Q 017868           96 VPGDRVALEP-GISCWRCDHCKGGRYNLCPEMKFFATPPVHGSLANQVVHPADLCFKLPDNVSLEEGAMCE-PLSVGLHA  173 (365)
Q Consensus        96 ~~Gd~V~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~v~~~~~~~iP~~~~~~~a~~~~-~~~~a~~~  173 (365)
                      ++||+|+..+ ...|+.|.+|+.++..+|......+. ...|++++|+.++++.++++|+++++.+++.++ .+.+||++
T Consensus        79 ~~Gd~V~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~~~g~~~s~~~~~~~~~~~lp~~~~~~~~a~l~~~~~ta~~~  157 (341)
T cd08297          79 KVGDRVGVKWLYDACGKCEYCRTGDETLCPNQKNSGY-TVDGTFAEYAIADARYVTPIPDGLSFEQAAPLLCAGVTVYKA  157 (341)
T ss_pred             CCCCEEEEecCCCCCCCCccccCCCcccCCCcccccc-ccCCcceeEEEeccccEEECCCCCCHHHHHHHHcchHHHHHH
Confidence            9999999875 56799999999999999988766655 356899999999999999999999999988765 78889999


Q ss_pred             HHhcCCCCCCEEEEEcC-CHHHHHHHHHHHHHCCCCeEEEEeCChhHHHHHHHcCCCEEEeCCCCcccHHHHHHHHHHHh
Q 017868          174 CRRANIGPETNVLIMGA-GPIGLVTMLGAPRAFGAPRIVIVDVDDYRLSVAKEIGADNIVKVSTNLQDIAEEVEKIQKAM  252 (365)
Q Consensus       174 ~~~~~~~~g~~vlI~G~-g~~G~~ai~~l~~~~g~~~vi~v~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~i~~~~~~~  252 (365)
                      ++..++++++++||+|+ +.+|+++++ +++.+|+ .++++.+++++.+.++++|++.++++..  .++.+.+.+..  .
T Consensus       158 ~~~~~~~~~~~vlV~g~~~~vg~~~~~-~a~~~g~-~v~~~~~~~~~~~~~~~~g~~~v~~~~~--~~~~~~~~~~~--~  231 (341)
T cd08297         158 LKKAGLKPGDWVVISGAGGGLGHLGVQ-YAKAMGL-RVIAIDVGDEKLELAKELGADAFVDFKK--SDDVEAVKELT--G  231 (341)
T ss_pred             HHhcCCCCCCEEEEECCCchHHHHHHH-HHHHCCC-eEEEEeCCHHHHHHHHHcCCcEEEcCCC--ccHHHHHHHHh--c
Confidence            87678999999999987 679999999 9999999 5777888889999999999988877543  36666666553  2


Q ss_pred             CCCceEEEeCCCCHHHHHHHHHhcccCCEEEEEccCCCCc-cccchHhhhcCcEEEeeccc-CCcHHHHHHHHHcCCCCC
Q 017868          253 GTGIDVSFDCAGLNKTMSTALGATCAGGKVCLVGMGHHEM-TVPLTPAAVREVDVVGVFRY-KNTWPLCLELLRSGKIDV  330 (365)
Q Consensus       253 ~~~~d~vid~~g~~~~~~~~~~~l~~~G~~~~~g~~~~~~-~~~~~~~~~~~~~i~~~~~~-~~~~~~~~~~l~~g~~~~  330 (365)
                      ++++|+++|+.+....+..++++++++|+++.+|...... .+....+..++.++.+.... .+.+++++++++++.+. 
T Consensus       232 ~~~vd~vl~~~~~~~~~~~~~~~l~~~g~~v~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~-  310 (341)
T cd08297         232 GGGAHAVVVTAVSAAAYEQALDYLRPGGTLVCVGLPPGGFIPLDPFDLVLRGITIVGSLVGTRQDLQEALEFAARGKVK-  310 (341)
T ss_pred             CCCCCEEEEcCCchHHHHHHHHHhhcCCEEEEecCCCCCCCCCCHHHHHhcccEEEEeccCCHHHHHHHHHHHHcCCCc-
Confidence            6789999998877778899999999999999998544322 33334455788888875543 46789999999999984 


Q ss_pred             CCceEEEecCChhhHHHHHHHHhcCCCceEEEEeC
Q 017868          331 KPLVTHRFGFSQKEVEEAFETSARGGTAIKVMFNL  365 (365)
Q Consensus       331 ~~~~~~~~~~~~~~~~~a~~~~~~~~~~gk~vi~~  365 (365)
                       +.+ +.|++  +++.++++.+..+...||+++++
T Consensus       311 -~~~-~~~~~--~~~~~a~~~~~~~~~~gkvvi~~  341 (341)
T cd08297         311 -PHI-QVVPL--EDLNEVFEKMEEGKIAGRVVVDF  341 (341)
T ss_pred             -cee-EEEcH--HHHHHHHHHHHcCCccceEEEeC
Confidence             333 56777  99999999999999999999875

These alcohol dehydrogenases are related to the cinnamyl alcohol dehydrogenases (CAD), members of the medium chain dehydrogenase/reductase family. NAD(P)(H)-dependent oxidoreductases are the major enzymes in the interconversion of alcohols and aldehydes, or ketones. Cinnamyl alcohol dehydrogenases (CAD) reduce cinnamaldehydes to cinnamyl alcohols in the last step of monolignal metabolism in plant cells walls. CAD binds 2 zinc ions and is NADPH- dependent. CAD family members are also found in non-plant species, e.g. in yeast where they have an aldehyde reductase activity. The medium chain dehydrogenases/reductase (MDR)/zinc-dependent alcohol dehydrogenase-like family, which contains the zinc-dependent alcohol dehydrogenase (ADH-Zn) and related proteins, is a diverse group of proteins related to the first identified member, class I mammalian ADH. MDRs display a broad range of activities and are distinguished from the smaller short cha

>PRK13771 putative alcohol dehydrogenase; Provisional

Probab=100.00  E-value=4e-39  Score=294.94  Aligned_cols=327  Identities=26%  Similarity=0.434  Sum_probs=270.3

Q ss_pred             ceeEEEecCCc-eEEEEecCCCCCCCcEEEEEeeeeeCcccHhhhhccccCCccCCCCcccCccceEEEEEeCCCCCCCC
Q 017868           18 NMAAWLLGVNT-LKIQPFELPSLGPYDVLVRMKAVGICGSDVHYLKTLRCADFVVKEPMVIGHECAGVIEKVGSEVKTLV   96 (365)
Q Consensus        18 ~~~~~~~~~~~-l~~~~~~~p~~~~~eVlI~v~~~~l~~~D~~~~~g~~~~~~~~~~p~~~G~e~~G~V~~vG~~v~~~~   96 (365)
                      |+++++.+++. +++++.|.|.+.++|++||+.++++|+.|+....|....   ..+|.++|+|++|+|+.+|++++.++
T Consensus         1 m~a~~~~~~~~~~~~~~~~~~~~~~~~v~V~v~~~~i~~~d~~~~~g~~~~---~~~~~~~g~e~~G~v~~~g~~~~~~~   77 (334)
T PRK13771          1 MKAVILPGFKQGYRIEEVPDPKPGKDEVVIKVNYAGLCYRDLLQLQGFYPR---MKYPVILGHEVVGTVEEVGENVKGFK   77 (334)
T ss_pred             CeeEEEcCCCCCcEEEeCCCCCCCCCeEEEEEEEEeechhhHHHhcCCCCC---CCCCeeccccceEEEEEeCCCCccCC
Confidence            57888887765 999999999999999999999999999999887764321   34577899999999999999999999


Q ss_pred             CCCEEEEcCCcCCCCCccccCCCCCCCCCccccccCCCCcceeeEEeecCCceEECCCCCCcchhccch-hhHHHHHHHH
Q 017868           97 PGDRVALEPGISCWRCDHCKGGRYNLCPEMKFFATPPVHGSLANQVVHPADLCFKLPDNVSLEEGAMCE-PLSVGLHACR  175 (365)
Q Consensus        97 ~Gd~V~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~v~~~~~~~iP~~~~~~~a~~~~-~~~~a~~~~~  175 (365)
                      +||+|++....+|+.|.+|..+..+.|......+. ...|+|++|+.++.++++++|+++++.+++.++ .+.+|++++.
T Consensus        78 ~G~~V~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~~~g~~~~~~~~~~~~~~~lp~~~~~~~~a~l~~~~~~a~~~~~  156 (334)
T PRK13771         78 PGDRVASLLYAPDGTCEYCRSGEEAYCKNRLGYGE-ELDGFFAEYAKVKVTSLVKVPPNVSDEGAVIVPCVTGMVYRGLR  156 (334)
T ss_pred             CCCEEEECCCCCCcCChhhcCCCcccCcccccccc-ccCceeeeeeecchhceEECCCCCCHHHhhcccchHHHHHHHHH
Confidence            99999999888999999999999999998766554 357999999999999999999999999988876 7788999886


Q ss_pred             hcCCCCCCEEEEEcC-CHHHHHHHHHHHHHCCCCeEEEEeCChhHHHHHHHcCCCEEEeCCCCcccHHHHHHHHHHHhCC
Q 017868          176 RANIGPETNVLIMGA-GPIGLVTMLGAPRAFGAPRIVIVDVDDYRLSVAKEIGADNIVKVSTNLQDIAEEVEKIQKAMGT  254 (365)
Q Consensus       176 ~~~~~~g~~vlI~G~-g~~G~~ai~~l~~~~g~~~vi~v~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~i~~~~~~~~~  254 (365)
                      ...++++++|||+|+ |.+|+++++ +++..|+ .++++++++++.+.++++ ++.+++..    ++.+.+++.     .
T Consensus       157 ~~~~~~~~~vlI~g~~g~~g~~~~~-la~~~g~-~vi~~~~~~~~~~~~~~~-~~~~~~~~----~~~~~v~~~-----~  224 (334)
T PRK13771        157 RAGVKKGETVLVTGAGGGVGIHAIQ-VAKALGA-KVIAVTSSESKAKIVSKY-ADYVIVGS----KFSEEVKKI-----G  224 (334)
T ss_pred             hcCCCCCCEEEEECCCccHHHHHHH-HHHHcCC-EEEEEeCCHHHHHHHHHH-HHHhcCch----hHHHHHHhc-----C
Confidence            568899999999987 999999999 9999999 477777888888888888 65554421    344444432     3


Q ss_pred             CceEEEeCCCCHHHHHHHHHhcccCCEEEEEccCCCCcc--ccchHhhhcCcEEEeeccc-CCcHHHHHHHHHcCCCCCC
Q 017868          255 GIDVSFDCAGLNKTMSTALGATCAGGKVCLVGMGHHEMT--VPLTPAAVREVDVVGVFRY-KNTWPLCLELLRSGKIDVK  331 (365)
Q Consensus       255 ~~d~vid~~g~~~~~~~~~~~l~~~G~~~~~g~~~~~~~--~~~~~~~~~~~~i~~~~~~-~~~~~~~~~~l~~g~~~~~  331 (365)
                      ++|+++|++|.. ....++++++++|+++.+|.......  ........++.++.+.... .+.+++++++++++.+  .
T Consensus       225 ~~d~~ld~~g~~-~~~~~~~~l~~~G~~v~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l--~  301 (334)
T PRK13771        225 GADIVIETVGTP-TLEESLRSLNMGGKIIQIGNVDPSPTYSLRLGYIILKDIEIIGHISATKRDVEEALKLVAEGKI--K  301 (334)
T ss_pred             CCcEEEEcCChH-HHHHHHHHHhcCCEEEEEeccCCCCCcccCHHHHHhcccEEEEecCCCHHHHHHHHHHHHcCCC--c
Confidence            799999999975 67899999999999999986433211  2233345677888876543 5678899999999998  4


Q ss_pred             CceEEEecCChhhHHHHHHHHhcCCCceEEEEeC
Q 017868          332 PLVTHRFGFSQKEVEEAFETSARGGTAIKVMFNL  365 (365)
Q Consensus       332 ~~~~~~~~~~~~~~~~a~~~~~~~~~~gk~vi~~  365 (365)
                      +.+.+.|++  +++++|++.++++...+|++++.
T Consensus       302 ~~~~~~~~~--~~~~~a~~~~~~~~~~~kvv~~~  333 (334)
T PRK13771        302 PVIGAEVSL--SEIDKALEELKDKSRIGKILVKP  333 (334)
T ss_pred             ceEeeeEcH--HHHHHHHHHHHcCCCcceEEEec
Confidence            557788888  99999999999888899999863

>cd08254 hydroxyacyl_CoA_DH 6-hydroxycyclohex-1-ene-1-carboxyl-CoA dehydrogenase, N-benzyl-3-pyrrolidinol dehydrogenase, and other MDR family members

Probab=100.00  E-value=1.1e-38  Score=292.55  Aligned_cols=333  Identities=31%  Similarity=0.535  Sum_probs=276.9

Q ss_pred             ceeEEEecCC-c-eEEEEecCCCCCCCcEEEEEeeeeeCcccHhhhhccccCCccCCCCcccCccceEEEEEeCCCCCCC
Q 017868           18 NMAAWLLGVN-T-LKIQPFELPSLGPYDVLVRMKAVGICGSDVHYLKTLRCADFVVKEPMVIGHECAGVIEKVGSEVKTL   95 (365)
Q Consensus        18 ~~~~~~~~~~-~-l~~~~~~~p~~~~~eVlI~v~~~~l~~~D~~~~~g~~~~~~~~~~p~~~G~e~~G~V~~vG~~v~~~   95 (365)
                      |+++++..++ . +.+.+.+.|.+.+++|+|+|.++++|+.|+....|....  ....|.++|+|++|+|+++|++++++
T Consensus         1 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~i~v~~~~~~~~d~~~~~g~~~~--~~~~~~~~g~~~~G~v~~~G~~v~~~   78 (338)
T cd08254           1 MKAWRFHKGSKGLLVLEEVPVPEPGPGEVLVKVKAAGVCHSDLHILDGGVPT--LTKLPLTLGHEIAGTVVEVGAGVTNF   78 (338)
T ss_pred             CeeEEEecCCCCceEEeccCCCCCCCCeEEEEEEEEeeccHhHHHHcCCCcc--cCCCCEeccccccEEEEEECCCCccC
Confidence            5778888654 3 578888999999999999999999999999988775431  23457789999999999999999999


Q ss_pred             CCCCEEEEcCCcCCCCCccccCCCCCCCCCccccccCCCCcceeeEEeecCCceEECCCCCCcchhccch-hhHHHHHHH
Q 017868           96 VPGDRVALEPGISCWRCDHCKGGRYNLCPEMKFFATPPVHGSLANQVVHPADLCFKLPDNVSLEEGAMCE-PLSVGLHAC  174 (365)
Q Consensus        96 ~~Gd~V~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~v~~~~~~~iP~~~~~~~a~~~~-~~~~a~~~~  174 (365)
                      ++||+|++.+..+|+.|.+|+.++.++|......+. ...|+|++|+.++.+.++++|+++++.+++.++ ++.+||+++
T Consensus        79 ~~Gd~V~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~~~g~~~~~~~~~~~~~~~lp~~~~~~~a~~~~~~~~ta~~~l  157 (338)
T cd08254          79 KVGDRVAVPAVIPCGACALCRRGRGNLCLNQGMPGL-GIDGGFAEYIVVPARALVPVPDGVPFAQAAVATDAVLTPYHAV  157 (338)
T ss_pred             CCCCEEEECCCCCCCCChhhhCcCcccCCCCCcccc-ccCCcceeeEEechHHeEECCCCCCHHHhhhhcchHHHHHHHH
Confidence            999999999999999999999999999966544443 356999999999999999999999999988775 888999988


Q ss_pred             H-hcCCCCCCEEEEEcCCHHHHHHHHHHHHHCCCCeEEEEeCChhHHHHHHHcCCCEEEeCCCCcccHHHHHHHHHHHhC
Q 017868          175 R-RANIGPETNVLIMGAGPIGLVTMLGAPRAFGAPRIVIVDVDDYRLSVAKEIGADNIVKVSTNLQDIAEEVEKIQKAMG  253 (365)
Q Consensus       175 ~-~~~~~~g~~vlI~G~g~~G~~ai~~l~~~~g~~~vi~v~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~i~~~~~~~~  253 (365)
                      . ..+++++++|||.|+|.+|+++++ +++..|++ ++++++++++.+.++++|++.++...+  ..+...+ ..  ..+
T Consensus       158 ~~~~~~~~~~~vli~g~g~vG~~~~~-la~~~G~~-V~~~~~s~~~~~~~~~~g~~~~~~~~~--~~~~~~~-~~--~~~  230 (338)
T cd08254         158 VRAGEVKPGETVLVIGLGGLGLNAVQ-IAKAMGAA-VIAVDIKEEKLELAKELGADEVLNSLD--DSPKDKK-AA--GLG  230 (338)
T ss_pred             HhccCCCCCCEEEEECCcHHHHHHHH-HHHHcCCE-EEEEcCCHHHHHHHHHhCCCEEEcCCC--cCHHHHH-HH--hcC
Confidence            4 567999999999888999999999 99999995 788888899999999999987766432  3444444 22  236


Q ss_pred             CCceEEEeCCCCHHHHHHHHHhcccCCEEEEEccCCCCccccchHhhhcCcEEEeeccc-CCcHHHHHHHHHcCCCCCCC
Q 017868          254 TGIDVSFDCAGLNKTMSTALGATCAGGKVCLVGMGHHEMTVPLTPAAVREVDVVGVFRY-KNTWPLCLELLRSGKIDVKP  332 (365)
Q Consensus       254 ~~~d~vid~~g~~~~~~~~~~~l~~~G~~~~~g~~~~~~~~~~~~~~~~~~~i~~~~~~-~~~~~~~~~~l~~g~~~~~~  332 (365)
                      +++|+++|++|....+..++++|+++|+++.++.......+....+..++.++.+.+.. .+.+.+++++++++.+.+  
T Consensus       231 ~~~D~vid~~g~~~~~~~~~~~l~~~G~~v~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ll~~~~l~~--  308 (338)
T cd08254         231 GGFDVIFDFVGTQPTFEDAQKAVKPGGRIVVVGLGRDKLTVDLSDLIARELRIIGSFGGTPEDLPEVLDLIAKGKLDP--  308 (338)
T ss_pred             CCceEEEECCCCHHHHHHHHHHhhcCCEEEEECCCCCCCccCHHHHhhCccEEEEeccCCHHHHHHHHHHHHcCCCcc--
Confidence            78999999998777889999999999999999865444444555567788888876654 567889999999999853  


Q ss_pred             ceEEEecCChhhHHHHHHHHhcCCCceEEEEeC
Q 017868          333 LVTHRFGFSQKEVEEAFETSARGGTAIKVMFNL  365 (365)
Q Consensus       333 ~~~~~~~~~~~~~~~a~~~~~~~~~~gk~vi~~  365 (365)
                      . .+.+++  +++.++++.+.+++..+|+|+++
T Consensus       309 ~-~~~~~~--~~~~~a~~~~~~~~~~~kvv~~~  338 (338)
T cd08254         309 Q-VETRPL--DEIPEVLERLHKGKVKGRVVLVP  338 (338)
T ss_pred             c-ceeEcH--HHHHHHHHHHHcCCccceEEEeC
Confidence            3 567777  99999999999999999999874

This group contains enzymes of the zinc-dependent alcohol dehydrogenase family, including members (aka MDR) identified as 6-hydroxycyclohex-1-ene-1-carboxyl-CoA dehydrogenase and N-benzyl-3-pyrrolidinol dehydrogenase. 6-hydroxycyclohex-1-ene-1-carboxyl-CoA dehydrogenase catalyzes the conversion of 6-Hydroxycyclohex-1-enecarbonyl-CoA and NAD+ to 6-Ketoxycyclohex-1-ene-1-carboxyl-CoA,NADH, and H+. This group displays the characteristic catalytic and structural zinc sites of the zinc-dependent alcohol dehydrogenases. NAD(P)(H)-dependent oxidoreductases are the major enzymes in the interconversion of alcohols and aldehydes, or ketones. Alcohol dehydrogenase in the liver converts ethanol and NAD+ to acetaldehyde and NADH, while in yeast and some other microorganisms ADH catalyzes the conversion acetaldehyde to ethanol in alcoholic fermentatio

>TIGR03366 HpnZ_proposed putative phosphonate catabolism associated alcohol dehydrogenase

Probab=100.00  E-value=7.6e-40  Score=291.68  Aligned_cols=260  Identities=25%  Similarity=0.396  Sum_probs=219.9

Q ss_pred             ccCccceEEEEEeCCCCC------CCCCCCEEEEcCCcCCCCCccccCCCCCCCCCccccccC------CCCcceeeEEe
Q 017868           76 VIGHECAGVIEKVGSEVK------TLVPGDRVALEPGISCWRCDHCKGGRYNLCPEMKFFATP------PVHGSLANQVV  143 (365)
Q Consensus        76 ~~G~e~~G~V~~vG~~v~------~~~~Gd~V~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~------~~~g~~~~~~~  143 (365)
                      ++|||++|+|+++|++|+      +|++||||++.+..+|++|.+|+.+++++|++..+.+..      ..+|+|+||+.
T Consensus         1 v~GHE~~G~V~~vG~~v~~~~~~~~~~~GdrV~~~~~~~cg~C~~C~~g~~~~C~~~~~~g~~~~~~~~~~~G~~aey~~   80 (280)
T TIGR03366         1 VLGHEIVGEVVALRGGFTPADDGVPLRLGQRVVWSVTVPCGRCFRCRRGLPQKCDSLRKYGHEALDSGWPLSGGYAEHCH   80 (280)
T ss_pred             CCCcccceEEEEeCCCccccccCCCCCCCCEEEEcCCCCCCCChhhhCcCcccCCChhhcCcccccCCccccccceeeEE
Confidence            589999999999999999      899999999999999999999999999999987665532      24699999999


Q ss_pred             ecCC-ceEECCCCCCcchhccch-hhHHHHHHHHhcCCCCCCEEEEEcCCHHHHHHHHHHHHHCCCCeEEEEeCChhHHH
Q 017868          144 HPAD-LCFKLPDNVSLEEGAMCE-PLSVGLHACRRANIGPETNVLIMGAGPIGLVTMLGAPRAFGAPRIVIVDVDDYRLS  221 (365)
Q Consensus       144 v~~~-~~~~iP~~~~~~~a~~~~-~~~~a~~~~~~~~~~~g~~vlI~G~g~~G~~ai~~l~~~~g~~~vi~v~~~~~~~~  221 (365)
                      +++. +++++|+++++++++.++ ...||+++++.....+|++|||+|+|++|++++| +++.+|+++|++++++++|.+
T Consensus        81 v~~~~~~~~lP~~~~~~~aa~l~~~~~ta~~al~~~~~~~g~~VlV~G~G~vG~~~~~-~ak~~G~~~Vi~~~~~~~r~~  159 (280)
T TIGR03366        81 LPAGTAIVPVPDDLPDAVAAPAGCATATVMAALEAAGDLKGRRVLVVGAGMLGLTAAA-AAAAAGAARVVAADPSPDRRE  159 (280)
T ss_pred             ecCCCcEEECCCCCCHHHhhHhhhHHHHHHHHHHhccCCCCCEEEEECCCHHHHHHHH-HHHHcCCCEEEEECCCHHHHH
Confidence            9997 799999999999988776 6678999987777779999999999999999999 999999977888888999999


Q ss_pred             HHHHcCCCEEEeCCCCcccHHHHHHHHHHHhCCCceEEEeCCCCHHHHHHHHHhcccCCEEEEEccCC--CCccccchHh
Q 017868          222 VAKEIGADNIVKVSTNLQDIAEEVEKIQKAMGTGIDVSFDCAGLNKTMSTALGATCAGGKVCLVGMGH--HEMTVPLTPA  299 (365)
Q Consensus       222 ~~~~~g~~~~~~~~~~~~~~~~~i~~~~~~~~~~~d~vid~~g~~~~~~~~~~~l~~~G~~~~~g~~~--~~~~~~~~~~  299 (365)
                      +++++|++.+++..    +..+.+++.+  .+.++|++||++|.+..+..++++++++|+++.+|...  ....++...+
T Consensus       160 ~a~~~Ga~~~i~~~----~~~~~~~~~~--~~~g~d~vid~~G~~~~~~~~~~~l~~~G~iv~~G~~~~~~~~~i~~~~~  233 (280)
T TIGR03366       160 LALSFGATALAEPE----VLAERQGGLQ--NGRGVDVALEFSGATAAVRACLESLDVGGTAVLAGSVFPGGPVALDPEQV  233 (280)
T ss_pred             HHHHcCCcEecCch----hhHHHHHHHh--CCCCCCEEEECCCChHHHHHHHHHhcCCCEEEEeccCCCCCceeeCHHHH
Confidence            99999998877642    2233444432  25689999999998878899999999999999998643  2335566678


Q ss_pred             hhcCcEEEeeccc-CCcHHHHHHHHHcC--CCCCCCceEEEecCChhh
Q 017868          300 AVREVDVVGVFRY-KNTWPLCLELLRSG--KIDVKPLVTHRFGFSQKE  344 (365)
Q Consensus       300 ~~~~~~i~~~~~~-~~~~~~~~~~l~~g--~~~~~~~~~~~~~~~~~~  344 (365)
                      ..+++++.+++.+ ..+++++++++.++  .+.+.++++++|++  ++
T Consensus       234 ~~~~~~i~g~~~~~~~~~~~~~~~l~~~~~~~~~~~~it~~~~l--~~  279 (280)
T TIGR03366       234 VRRWLTIRGVHNYEPRHLDQAVRFLAANGQRFPFEELVGKPFPL--AD  279 (280)
T ss_pred             HhCCcEEEecCCCCHHHHHHHHHHHHhhCCCCCHHHHhhccccc--cc
Confidence            8899999998876 46799999999985  55566788899888  65

This clade of zinc-binding alcohol dehydrogenases (members of pfam00107) are repeatedly associated with genes proposed to be involved with the catabolism of phosphonate compounds.

>PLN03154 putative allyl alcohol dehydrogenase; Provisional

Probab=100.00  E-value=2.5e-38  Score=290.06  Aligned_cols=305  Identities=17%  Similarity=0.187  Sum_probs=241.2

Q ss_pred             hcceeEEEe-------cCCceEEEE---ecCCC-CCCCcEEEEEeeeeeCcccHhhhhccccCCccCCCCcccCc--cce
Q 017868           16 EVNMAAWLL-------GVNTLKIQP---FELPS-LGPYDVLVRMKAVGICGSDVHYLKTLRCADFVVKEPMVIGH--ECA   82 (365)
Q Consensus        16 ~~~~~~~~~-------~~~~l~~~~---~~~p~-~~~~eVlI~v~~~~l~~~D~~~~~g~~~~~~~~~~p~~~G~--e~~   82 (365)
                      .++|++++.       .++.|++.+   .+.|. ++++||||||.++++||.|...+.+...   ....|.++|+  |++
T Consensus         7 ~~~~~~~~~~~~~~~~~~~~f~~~~~~~~~~~~~~~~gevlVkv~a~~inp~~~~~~~~~~~---~~~~p~~~G~~~~~~   83 (348)
T PLN03154          7 VENKQVILKNYIDGIPKETDMEVKLGNKIELKAPKGSGAFLVKNLYLSCDPYMRGRMRDFHD---SYLPPFVPGQRIEGF   83 (348)
T ss_pred             ccceEEEEecCCCCCCCcccEEEEeecccCCCCCCCCCeEEEEEEEEccCHHHHHhhhccCC---CCCCCcCCCCeeEee
Confidence            345666664       225788887   46763 5899999999999999998764432111   1235889997  889


Q ss_pred             EEEEEeCCCCCCCCCCCEEEEcCCcCCCCCccccCCCCCCCCCccccccCCCCcceeeEEeecCCc--eEE--CCCCCCc
Q 017868           83 GVIEKVGSEVKTLVPGDRVALEPGISCWRCDHCKGGRYNLCPEMKFFATPPVHGSLANQVVHPADL--CFK--LPDNVSL  158 (365)
Q Consensus        83 G~V~~vG~~v~~~~~Gd~V~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~v~~~~--~~~--iP~~~~~  158 (365)
                      |+|..+|+++++|++||+|+++                               |+|+||+.++...  +.+  +|+++++
T Consensus        84 G~v~~vg~~v~~~~~Gd~V~~~-------------------------------~~~aey~~v~~~~~~~~~~~~P~~~~~  132 (348)
T PLN03154         84 GVSKVVDSDDPNFKPGDLISGI-------------------------------TGWEEYSLIRSSDNQLRKIQLQDDIPL  132 (348)
T ss_pred             EEEEEEecCCCCCCCCCEEEec-------------------------------CCcEEEEEEeccccceEEccCcCCCCH
Confidence            9999999999999999999764                               7899999999753  544  5899998


Q ss_pred             c-hhccch-hhHHHHHHH-HhcCCCCCCEEEEEcC-CHHHHHHHHHHHHHCCCCeEEEEeCChhHHHHHH-HcCCCEEEe
Q 017868          159 E-EGAMCE-PLSVGLHAC-RRANIGPETNVLIMGA-GPIGLVTMLGAPRAFGAPRIVIVDVDDYRLSVAK-EIGADNIVK  233 (365)
Q Consensus       159 ~-~a~~~~-~~~~a~~~~-~~~~~~~g~~vlI~G~-g~~G~~ai~~l~~~~g~~~vi~v~~~~~~~~~~~-~~g~~~~~~  233 (365)
                      + +|+.++ +..|||+++ +.+++++|++|||+|+ |++|++++| +++.+|+ .++++++++++.++++ ++|++.+++
T Consensus       133 ~~~aa~l~~~~~TA~~al~~~~~~~~g~~VlV~GaaG~vG~~aiq-lAk~~G~-~Vi~~~~~~~k~~~~~~~lGa~~vi~  210 (348)
T PLN03154        133 SYHLGLLGMAGFTAYAGFYEVCSPKKGDSVFVSAASGAVGQLVGQ-LAKLHGC-YVVGSAGSSQKVDLLKNKLGFDEAFN  210 (348)
T ss_pred             HHHHHHcccHHHHHHHHHHHhcCCCCCCEEEEecCccHHHHHHHH-HHHHcCC-EEEEEcCCHHHHHHHHHhcCCCEEEE
Confidence            6 566665 888999998 4588999999999987 999999999 9999999 5788888899999887 799999988


Q ss_pred             CCCCcccHHHHHHHHHHHhCCCceEEEeCCCCHHHHHHHHHhcccCCEEEEEccCCCC-c-----cccchHhhhcCcEEE
Q 017868          234 VSTNLQDIAEEVEKIQKAMGTGIDVSFDCAGLNKTMSTALGATCAGGKVCLVGMGHHE-M-----TVPLTPAAVREVDVV  307 (365)
Q Consensus       234 ~~~~~~~~~~~i~~~~~~~~~~~d~vid~~g~~~~~~~~~~~l~~~G~~~~~g~~~~~-~-----~~~~~~~~~~~~~i~  307 (365)
                      +.. ..++.+.+++..   ++++|++||++|.. .+..++++++++|+++.+|..... .     ..+...+..+++++.
T Consensus       211 ~~~-~~~~~~~i~~~~---~~gvD~v~d~vG~~-~~~~~~~~l~~~G~iv~~G~~~~~~~~~~~~~~~~~~~~~k~~~i~  285 (348)
T PLN03154        211 YKE-EPDLDAALKRYF---PEGIDIYFDNVGGD-MLDAALLNMKIHGRIAVCGMVSLNSLSASQGIHNLYNLISKRIRMQ  285 (348)
T ss_pred             CCC-cccHHHHHHHHC---CCCcEEEEECCCHH-HHHHHHHHhccCCEEEEECccccCCCCCCCCcccHHHHhhccceEE
Confidence            642 135666665542   46899999999964 888999999999999999854321 1     113345677888998


Q ss_pred             eeccc------CCcHHHHHHHHHcCCCCCCCceEEEecCChhhHHHHHHHHhcCCCceEEEEeC
Q 017868          308 GVFRY------KNTWPLCLELLRSGKIDVKPLVTHRFGFSQKEVEEAFETSARGGTAIKVMFNL  365 (365)
Q Consensus       308 ~~~~~------~~~~~~~~~~l~~g~~~~~~~~~~~~~~~~~~~~~a~~~~~~~~~~gk~vi~~  365 (365)
                      +++..      .+.++++++++++|++  ++.+.++|+|  +++.+|++.+++++..||+||++
T Consensus       286 g~~~~~~~~~~~~~~~~~~~l~~~G~l--~~~~~~~~~L--~~~~~A~~~l~~g~~~GKvVl~~  345 (348)
T PLN03154        286 GFLQSDYLHLFPQFLENVSRYYKQGKI--VYIEDMSEGL--ESAPAALVGLFSGKNVGKQVIRV  345 (348)
T ss_pred             EEEHHHHHHHHHHHHHHHHHHHHCCCc--cCceecccCH--HHHHHHHHHHHcCCCCceEEEEe
Confidence            87643      2457789999999999  5566677888  99999999999999999999974

>cd08259 Zn_ADH5 Alcohol dehydrogenases of the MDR family

Probab=100.00  E-value=1e-37  Score=285.23  Aligned_cols=327  Identities=31%  Similarity=0.533  Sum_probs=268.4

Q ss_pred             ceeEEEec-CCceEEEEecCCCCCCCcEEEEEeeeeeCcccHhhhhccccCCccCCCCcccCccceEEEEEeCCCCCCCC
Q 017868           18 NMAAWLLG-VNTLKIQPFELPSLGPYDVLVRMKAVGICGSDVHYLKTLRCADFVVKEPMVIGHECAGVIEKVGSEVKTLV   96 (365)
Q Consensus        18 ~~~~~~~~-~~~l~~~~~~~p~~~~~eVlI~v~~~~l~~~D~~~~~g~~~~~~~~~~p~~~G~e~~G~V~~vG~~v~~~~   96 (365)
                      |+++++.. ++.+.+.+.|.|.+.++||+|+|.++++|+.|+....|....   ...|.++|+|++|+|+.+|++++.|+
T Consensus         1 m~a~~~~~~~~~~~~~~~~~p~~~~~~v~v~v~~~~i~~~d~~~~~g~~~~---~~~~~~~g~e~~G~v~~~G~~v~~~~   77 (332)
T cd08259           1 MKAAILHKPNKPLQIEEVPDPEPGPGEVLIKVKAAGVCYRDLLFWKGFFPR---GKYPLILGHEIVGTVEEVGEGVERFK   77 (332)
T ss_pred             CeEEEEecCCCceEEEEccCCCCCCCeEEEEEEEEecchhhhHHhcCCCCC---CCCCeeccccceEEEEEECCCCccCC
Confidence            57888876 578999999999999999999999999999999988764321   34577899999999999999999999


Q ss_pred             CCCEEEEcCCcCCCCCccccCCCCCCCCCccccccCCCCcceeeEEeecCCceEECCCCCCcchhccch-hhHHHHHHHH
Q 017868           97 PGDRVALEPGISCWRCDHCKGGRYNLCPEMKFFATPPVHGSLANQVVHPADLCFKLPDNVSLEEGAMCE-PLSVGLHACR  175 (365)
Q Consensus        97 ~Gd~V~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~v~~~~~~~iP~~~~~~~a~~~~-~~~~a~~~~~  175 (365)
                      +||+|+++.+..|++|.+|..+.+++|.+....+ ....|+|++|+.++...++++|+++++++++.++ .+.+||++++
T Consensus        78 ~Gd~V~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~~~~g~~~~~~~v~~~~~~~ip~~~~~~~~~~~~~~~~ta~~~l~  156 (332)
T cd08259          78 PGDRVILYYYIPCGKCEYCLSGEENLCRNRAEYG-EEVDGGFAEYVKVPERSLVKLPDNVSDESAALAACVVGTAVHALK  156 (332)
T ss_pred             CCCEEEECCCCCCcCChhhhCCCcccCCCccccc-cccCCeeeeEEEechhheEECCCCCCHHHHhhhccHHHHHHHHHH
Confidence            9999999999999999999999999998763333 3457999999999999999999999999888776 7888999986


Q ss_pred             hcCCCCCCEEEEEcC-CHHHHHHHHHHHHHCCCCeEEEEeCChhHHHHHHHcCCCEEEeCCCCcccHHHHHHHHHHHhCC
Q 017868          176 RANIGPETNVLIMGA-GPIGLVTMLGAPRAFGAPRIVIVDVDDYRLSVAKEIGADNIVKVSTNLQDIAEEVEKIQKAMGT  254 (365)
Q Consensus       176 ~~~~~~g~~vlI~G~-g~~G~~ai~~l~~~~g~~~vi~v~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~i~~~~~~~~~  254 (365)
                      .+++.+++++||+|+ |.+|+++++ +++..|++ ++.+.+++++.+.+++++.+.+++..    ++.+.+.+.     .
T Consensus       157 ~~~~~~~~~vlI~ga~g~vG~~~~~-~a~~~g~~-v~~~~~~~~~~~~~~~~~~~~~~~~~----~~~~~~~~~-----~  225 (332)
T cd08259         157 RAGVKKGDTVLVTGAGGGVGIHAIQ-LAKALGAR-VIAVTRSPEKLKILKELGADYVIDGS----KFSEDVKKL-----G  225 (332)
T ss_pred             HhCCCCCCEEEEECCCCHHHHHHHH-HHHHcCCe-EEEEeCCHHHHHHHHHcCCcEEEecH----HHHHHHHhc-----c
Confidence            688999999999987 999999999 88999995 66666788888888889987665432    144444432     3


Q ss_pred             CceEEEeCCCCHHHHHHHHHhcccCCEEEEEccCCCCcc-ccchHhhhcCcEEEeeccc-CCcHHHHHHHHHcCCCCCCC
Q 017868          255 GIDVSFDCAGLNKTMSTALGATCAGGKVCLVGMGHHEMT-VPLTPAAVREVDVVGVFRY-KNTWPLCLELLRSGKIDVKP  332 (365)
Q Consensus       255 ~~d~vid~~g~~~~~~~~~~~l~~~G~~~~~g~~~~~~~-~~~~~~~~~~~~i~~~~~~-~~~~~~~~~~l~~g~~~~~~  332 (365)
                      ++|++++++|.. .....++++.++|+++.++....... ........++..+.+.... ...+++++++++++.+  .+
T Consensus       226 ~~d~v~~~~g~~-~~~~~~~~~~~~g~~v~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l--~~  302 (332)
T cd08259         226 GADVVIELVGSP-TIEESLRSLNKGGRLVLIGNVTPDPAPLRPGLLILKEIRIIGSISATKADVEEALKLVKEGKI--KP  302 (332)
T ss_pred             CCCEEEECCChH-HHHHHHHHhhcCCEEEEEcCCCCCCcCCCHHHHHhCCcEEEEecCCCHHHHHHHHHHHHcCCC--cc
Confidence            799999999975 57889999999999999875432211 1223344567777766543 5678889999999988  45


Q ss_pred             ceEEEecCChhhHHHHHHHHhcCCCceEEEEe
Q 017868          333 LVTHRFGFSQKEVEEAFETSARGGTAIKVMFN  364 (365)
Q Consensus       333 ~~~~~~~~~~~~~~~a~~~~~~~~~~gk~vi~  364 (365)
                      .+.++|++  +++.+|++.+.++...+|++++
T Consensus       303 ~~~~~~~~--~~~~~a~~~~~~~~~~~kvv~~  332 (332)
T cd08259         303 VIDRVVSL--EDINEALEDLKSGKVVGRIVLK  332 (332)
T ss_pred             ceeEEEcH--HHHHHHHHHHHcCCcccEEEeC
Confidence            57788888  9999999999999889999874

NAD(P)(H)-dependent oxidoreductases are the major enzymes in the interconversion of alcohols and aldehydes, or ketones. This group contains proteins that share the characteristic catalytic and structural zinc-binding sites of the zinc-dependent alcohol dehydrogenase family. Alcohol dehydrogenase in the liver converts ethanol and NAD+ to acetaldehyde and NADH, while in yeast and some other microorganisms ADH catalyzes the conversion acetaldehyde to ethanol in alcoholic fermentation. ADH is a member of the medium chain alcohol dehydrogenase family (MDR), which have a NAD(P)(H)-binding domain in a Rossmann fold of a beta-alpha form. The NAD(H)-binding region is comprised of 2 structurally similar halves, each of which contacts a mononucleotide. A GxGxxG motif after the first mononucleotide contact half allows the close contact of the coenzyme with the ADH backbone. The N-terminal catalytic domain has a distant homology to GroES.

>cd08298 CAD2 Cinnamyl alcohol dehydrogenases (CAD)

Probab=100.00  E-value=1.8e-37  Score=283.35  Aligned_cols=320  Identities=25%  Similarity=0.382  Sum_probs=263.1

Q ss_pred             ceeEEEecCC-----ceEEEEecCCCCCCCcEEEEEeeeeeCcccHhhhhccccCCccCCCCcccCccceEEEEEeCCCC
Q 017868           18 NMAAWLLGVN-----TLKIQPFELPSLGPYDVLVRMKAVGICGSDVHYLKTLRCADFVVKEPMVIGHECAGVIEKVGSEV   92 (365)
Q Consensus        18 ~~~~~~~~~~-----~l~~~~~~~p~~~~~eVlI~v~~~~l~~~D~~~~~g~~~~~~~~~~p~~~G~e~~G~V~~vG~~v   92 (365)
                      |+++++.+++     .+++.+.+.|.+.++||+||+.++++|+.|+....|....   ...|.++|||++|+|+.+|+++
T Consensus         1 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ev~irv~~~~i~~~d~~~~~g~~~~---~~~~~~~g~e~~G~V~~vG~~v   77 (329)
T cd08298           1 MKAMVLEKPGPIEENPLRLTEVPVPEPGPGEVLIKVEACGVCRTDLHIVEGDLPP---PKLPLIPGHEIVGRVEAVGPGV   77 (329)
T ss_pred             CeEEEEecCCCCCCCCceEEeccCCCCCCCEEEEEEEEEeccHHHHHHHhCCCCC---CCCCccccccccEEEEEECCCC
Confidence            5677777655     7888899988899999999999999999999988764322   3457799999999999999999


Q ss_pred             CCCCCCCEEEEc-CCcCCCCCccccCCCCCCCCCccccccCCCCcceeeEEeecCCceEECCCCCCcchhccch-hhHHH
Q 017868           93 KTLVPGDRVALE-PGISCWRCDHCKGGRYNLCPEMKFFATPPVHGSLANQVVHPADLCFKLPDNVSLEEGAMCE-PLSVG  170 (365)
Q Consensus        93 ~~~~~Gd~V~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~v~~~~~~~iP~~~~~~~a~~~~-~~~~a  170 (365)
                      +++++||+|++. ...+|+.|++|..+.+++|+...+.+. ..+|+|++|+.++.+.++++|+++++.+++.+. .+.+|
T Consensus        78 ~~~~~Gd~V~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~~~g~~~~~~~~~~~~~~~lp~~~~~~~~~~~~~~~~ta  156 (329)
T cd08298          78 TRFSVGDRVGVPWLGSTCGECRYCRSGRENLCDNARFTGY-TVDGGYAEYMVADERFAYPIPEDYDDEEAAPLLCAGIIG  156 (329)
T ss_pred             CCCcCCCEEEEeccCCCCCCChhHhCcChhhCCCcccccc-ccCCceEEEEEecchhEEECCCCCCHHHhhHhhhhhHHH
Confidence            999999999764 446799999999999999998876665 346999999999999999999999999888775 88899


Q ss_pred             HHHHHhcCCCCCCEEEEEcCCHHHHHHHHHHHHHCCCCeEEEEeCChhHHHHHHHcCCCEEEeCCCCcccHHHHHHHHHH
Q 017868          171 LHACRRANIGPETNVLIMGAGPIGLVTMLGAPRAFGAPRIVIVDVDDYRLSVAKEIGADNIVKVSTNLQDIAEEVEKIQK  250 (365)
Q Consensus       171 ~~~~~~~~~~~g~~vlI~G~g~~G~~ai~~l~~~~g~~~vi~v~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~i~~~~~  250 (365)
                      |++++.+++++++++||+|+|++|+++++ +++..|+ .++++++++++.++++++|++.+++....             
T Consensus       157 ~~~~~~~~~~~~~~vlV~g~g~vg~~~~~-la~~~g~-~v~~~~~~~~~~~~~~~~g~~~~~~~~~~-------------  221 (329)
T cd08298         157 YRALKLAGLKPGQRLGLYGFGASAHLALQ-IARYQGA-EVFAFTRSGEHQELARELGADWAGDSDDL-------------  221 (329)
T ss_pred             HHHHHhhCCCCCCEEEEECCcHHHHHHHH-HHHHCCC-eEEEEcCChHHHHHHHHhCCcEEeccCcc-------------
Confidence            99998889999999999999999999999 8999998 57777788899999999999877654321             


Q ss_pred             HhCCCceEEEeCCCCHHHHHHHHHhcccCCEEEEEccCCCCc-cccchHhhhcCcEEEeeccc-CCcHHHHHHHHHcCCC
Q 017868          251 AMGTGIDVSFDCAGLNKTMSTALGATCAGGKVCLVGMGHHEM-TVPLTPAAVREVDVVGVFRY-KNTWPLCLELLRSGKI  328 (365)
Q Consensus       251 ~~~~~~d~vid~~g~~~~~~~~~~~l~~~G~~~~~g~~~~~~-~~~~~~~~~~~~~i~~~~~~-~~~~~~~~~~l~~g~~  328 (365)
                       .++++|+++++.+....+...+++++++|+++.+|...... ..+. ....++..+.+.... .+.+.+++++++++.+
T Consensus       222 -~~~~vD~vi~~~~~~~~~~~~~~~l~~~G~~v~~g~~~~~~~~~~~-~~~~~~~~i~~~~~~~~~~~~~~~~l~~~~~l  299 (329)
T cd08298         222 -PPEPLDAAIIFAPVGALVPAALRAVKKGGRVVLAGIHMSDIPAFDY-ELLWGEKTIRSVANLTRQDGEEFLKLAAEIPI  299 (329)
T ss_pred             -CCCcccEEEEcCCcHHHHHHHHHHhhcCCEEEEEcCCCCCCCccch-hhhhCceEEEEecCCCHHHHHHHHHHHHcCCC
Confidence             14679999998776778899999999999999887532211 1111 123456666665544 4568889999999988


Q ss_pred             CCCCceEEEecCChhhHHHHHHHHhcCCCceEEEE
Q 017868          329 DVKPLVTHRFGFSQKEVEEAFETSARGGTAIKVMF  363 (365)
Q Consensus       329 ~~~~~~~~~~~~~~~~~~~a~~~~~~~~~~gk~vi  363 (365)
                      .  + ..+.|++  +++++|++.++++...||+|+
T Consensus       300 ~--~-~~~~~~~--~~~~~a~~~~~~~~~~~~~v~  329 (329)
T cd08298         300 K--P-EVETYPL--EEANEALQDLKEGRIRGAAVL  329 (329)
T ss_pred             C--c-eEEEEeH--HHHHHHHHHHHcCCCcceeeC
Confidence            4  3 3577888  999999999999999999874

These alcohol dehydrogenases are related to the cinnamyl alcohol dehydrogenases (CAD), members of the medium chain dehydrogenase/reductase family. NAD(P)(H)-dependent oxidoreductases are the major enzymes in the interconversion of alcohols and aldehydes, or ketones. Cinnamyl alcohol dehydrogenases (CAD) reduce cinnamaldehydes to cinnamyl alcohols in the last step of monolignal metabolism in plant cells walls. CAD binds 2 zinc ions and is NADPH- dependent. CAD family members are also found in non-plant species, e.g. in yeast where they have an aldehyde reductase activity. The medium chain dehydrogenases/reductase (MDR)/zinc-dependent alcohol dehydrogenase-like family, which contains the zinc-dependent alcohol dehydrogenase (ADH-Zn) and related proteins, is a diverse group of proteins related to the first identified member, class I mammalian ADH. MDRs display a broad range of activities and are distinguished from the smaller short cha

>KOG0025 consensus Zn2+-binding dehydrogenase (nuclear receptor binding factor-1) [Transcription; Energy production and conversion]

Probab=100.00  E-value=3.2e-38  Score=263.26  Aligned_cols=313  Identities=20%  Similarity=0.277  Sum_probs=248.7

Q ss_pred             cchhcceeEEEecC----CceEEEEecCCCCCCCcEEEEEeeeeeCcccHhhhhccccCCccCCCCcccCccceEEEEEe
Q 017868           13 DGEEVNMAAWLLGV----NTLKIQPFELPSLGPYDVLVRMKAVGICGSDVHYLKTLRCADFVVKEPMVIGHECAGVIEKV   88 (365)
Q Consensus        13 ~~~~~~~~~~~~~~----~~l~~~~~~~p~~~~~eVlI~v~~~~l~~~D~~~~~g~~~~~~~~~~p~~~G~e~~G~V~~v   88 (365)
                      .++...+++++...    +.+++.+.++|+...++|+||..++.|||+|+..++|.++..  ..+|.+-|+|++|+|+.+
T Consensus        15 q~~~~~kalvY~~hgdP~kVlql~~~~~p~~~~s~v~Vk~LAaPINPsDIN~IQGvYpvr--P~~PAVgGnEGv~eVv~v   92 (354)
T KOG0025|consen   15 QMPARSKALVYSEHGDPAKVLQLKNLELPAVPGSDVLVKMLAAPINPSDINQIQGVYPVR--PELPAVGGNEGVGEVVAV   92 (354)
T ss_pred             ccccccceeeecccCCchhhheeecccCCCCCCCceeeeeeecCCChHHhhhhccccCCC--CCCCcccCCcceEEEEEe
Confidence            34556788888732    588999999999988889999999999999999999987654  466899999999999999


Q ss_pred             CCCCCCCCCCCEEEEcCCcCCCCCccccCCCCCCCCCccccccCCCCcceeeEEeecCCceEECCCCCCcchhccch-hh
Q 017868           89 GSEVKTLVPGDRVALEPGISCWRCDHCKGGRYNLCPEMKFFATPPVHGSLANQVVHPADLCFKLPDNVSLEEGAMCE-PL  167 (365)
Q Consensus        89 G~~v~~~~~Gd~V~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~v~~~~~~~iP~~~~~~~a~~~~-~~  167 (365)
                      |+++++|++||+|+....                           ..|+|++|.+.+++.++++++.++.+.||++. .-
T Consensus        93 Gs~vkgfk~Gd~VIp~~a---------------------------~lGtW~t~~v~~e~~Li~vd~~~pl~~AAT~~VNP  145 (354)
T KOG0025|consen   93 GSNVKGFKPGDWVIPLSA---------------------------NLGTWRTEAVFSESDLIKVDKDIPLASAATLSVNP  145 (354)
T ss_pred             cCCcCccCCCCeEeecCC---------------------------CCccceeeEeecccceEEcCCcCChhhhheeccCc
Confidence            999999999999998743                           45999999999999999999999999999997 78


Q ss_pred             HHHHHHHH-hcCCCCCCEEEEEcC-CHHHHHHHHHHHHHCCCCeEEEEeCCh---hHHHHHHHcCCCEEEeCCCCcccHH
Q 017868          168 SVGLHACR-RANIGPETNVLIMGA-GPIGLVTMLGAPRAFGAPRIVIVDVDD---YRLSVAKEIGADNIVKVSTNLQDIA  242 (365)
Q Consensus       168 ~~a~~~~~-~~~~~~g~~vlI~G~-g~~G~~ai~~l~~~~g~~~vi~v~~~~---~~~~~~~~~g~~~~~~~~~~~~~~~  242 (365)
                      +|||.++. -.++.+||+|+-.|+ +++|++.+| +|+++|++.+-++...+   +-.+.++.+||++++.-++...   
T Consensus       146 ~TAyrmL~dfv~L~~GD~vIQNganS~VG~~ViQ-laka~GiktinvVRdR~~ieel~~~Lk~lGA~~ViTeeel~~---  221 (354)
T KOG0025|consen  146 CTAYRMLKDFVQLNKGDSVIQNGANSGVGQAVIQ-LAKALGIKTINVVRDRPNIEELKKQLKSLGATEVITEEELRD---  221 (354)
T ss_pred             hHHHHHHHHHHhcCCCCeeeecCcccHHHHHHHH-HHHHhCcceEEEeecCccHHHHHHHHHHcCCceEecHHHhcc---
Confidence            89999995 478999999888888 999999999 99999997666664433   3345677899999986322110   


Q ss_pred             HHHHHHHHHhCCCceEEEeCCCCHHHHHHHHHhcccCCEEEEEc-cCCCCccccchHhhhcCcEEEeeccc---------
Q 017868          243 EEVEKIQKAMGTGIDVSFDCAGLNKTMSTALGATCAGGKVCLVG-MGHHEMTVPLTPAAVREVDVVGVFRY---------  312 (365)
Q Consensus       243 ~~i~~~~~~~~~~~d~vid~~g~~~~~~~~~~~l~~~G~~~~~g-~~~~~~~~~~~~~~~~~~~i~~~~~~---------  312 (365)
                      ...+.. ......+.+.|+|+|+. ......+.|.+||.++.+| ++..+...+...+.|+.+.++|+|..         
T Consensus       222 ~~~~k~-~~~~~~prLalNcVGGk-sa~~iar~L~~GgtmvTYGGMSkqPv~~~ts~lIFKdl~~rGfWvt~W~~~~~~p  299 (354)
T KOG0025|consen  222 RKMKKF-KGDNPRPRLALNCVGGK-SATEIARYLERGGTMVTYGGMSKQPVTVPTSLLIFKDLKLRGFWVTRWKKEHKSP  299 (354)
T ss_pred             hhhhhh-hccCCCceEEEeccCch-hHHHHHHHHhcCceEEEecCccCCCcccccchheeccceeeeeeeeehhhccCCc
Confidence            111111 11256789999999987 5567789999999999997 66777889999999999999999854         


Q ss_pred             ---CCcHHHHHHHHHcCCCCCCCceEEEecCChhhHHHHHHHHhcC-CCceEEEEe
Q 017868          313 ---KNTWPLCLELLRSGKIDVKPLVTHRFGFSQKEVEEAFETSARG-GTAIKVMFN  364 (365)
Q Consensus       313 ---~~~~~~~~~~l~~g~~~~~~~~~~~~~~~~~~~~~a~~~~~~~-~~~gk~vi~  364 (365)
                         .+.+.++.+|+++|++.  .......+|  ++...|++..... ...||.+|.
T Consensus       300 e~~~~~i~~~~~l~~~G~i~--~~~~e~v~L--~~~~tald~~L~~~~~~~Kq~i~  351 (354)
T KOG0025|consen  300 EERKEMIDELCDLYRRGKLK--APNCEKVPL--ADHKTALDAALSKFGKSGKQIIV  351 (354)
T ss_pred             HHHHHHHHHHHHHHHcCeec--cccceeeec--hhhhHHHHHHHHHhccCCceEEE
Confidence               23567899999999994  333334456  7777887754333 333566654

>cd08266 Zn_ADH_like1 Alcohol dehydrogenases of the MDR family

Probab=100.00  E-value=3.4e-37  Score=282.80  Aligned_cols=334  Identities=29%  Similarity=0.477  Sum_probs=272.4

Q ss_pred             ceeEEEe---cCCceEEEEecCCCCCCCcEEEEEeeeeeCcccHhhhhccccCCccCCCCcccCccceEEEEEeCCCCCC
Q 017868           18 NMAAWLL---GVNTLKIQPFELPSLGPYDVLVRMKAVGICGSDVHYLKTLRCADFVVKEPMVIGHECAGVIEKVGSEVKT   94 (365)
Q Consensus        18 ~~~~~~~---~~~~l~~~~~~~p~~~~~eVlI~v~~~~l~~~D~~~~~g~~~~~~~~~~p~~~G~e~~G~V~~vG~~v~~   94 (365)
                      |+++++.   ....+++.+.+.|.+.+++|+|++.++++|+.|+....|....  ....|.++|||++|+|+.+|++++.
T Consensus         1 ~~a~~~~~~~~~~~~~~~~~~~~~~~~~~v~v~v~~~~i~~~d~~~~~g~~~~--~~~~~~~~g~e~~G~v~~~G~~~~~   78 (342)
T cd08266           1 MKAVVIRGHGGPEVLEYGDLPEPEPGPDEVLVRVKAAALNHLDLWVRRGMPGI--KLPLPHILGSDGAGVVEAVGPGVTN   78 (342)
T ss_pred             CeEEEEecCCCccceeEeecCCCCCCCCeEEEEEEeeecCHHHHHHhcCCCCC--CCCCCeecccceEEEEEEeCCCCCC
Confidence            5788887   4467888888888899999999999999999999888764321  1355788999999999999999999


Q ss_pred             CCCCCEEEEcCCcCCCCCccccCCCCCCCCCccccccCCCCcceeeEEeecCCceEECCCCCCcchhccch-hhHHHHHH
Q 017868           95 LVPGDRVALEPGISCWRCDHCKGGRYNLCPEMKFFATPPVHGSLANQVVHPADLCFKLPDNVSLEEGAMCE-PLSVGLHA  173 (365)
Q Consensus        95 ~~~Gd~V~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~v~~~~~~~iP~~~~~~~a~~~~-~~~~a~~~  173 (365)
                      |++||+|++.+..+|+.|.+|..+.++.|+...+.+. ...|++++|+.++.+.++++|+++++++++.++ .+.+|+++
T Consensus        79 ~~~Gd~V~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~-~~~g~~~~~~~~~~~~~~~~p~~~~~~~a~~~~~~~~~a~~~  157 (342)
T cd08266          79 VKPGQRVVIYPGISCGRCEYCLAGRENLCAQYGILGE-HVDGGYAEYVAVPARNLLPIPDNLSFEEAAAAPLTFLTAWHM  157 (342)
T ss_pred             CCCCCEEEEccccccccchhhcccccccccccccccc-ccCcceeEEEEechHHceeCCCCCCHHHHHhhhhHHHHHHHH
Confidence            9999999999999999999999999999998766654 357899999999999999999999999888876 67789988


Q ss_pred             H-HhcCCCCCCEEEEEcC-CHHHHHHHHHHHHHCCCCeEEEEeCChhHHHHHHHcCCCEEEeCCCCcccHHHHHHHHHHH
Q 017868          174 C-RRANIGPETNVLIMGA-GPIGLVTMLGAPRAFGAPRIVIVDVDDYRLSVAKEIGADNIVKVSTNLQDIAEEVEKIQKA  251 (365)
Q Consensus       174 ~-~~~~~~~g~~vlI~G~-g~~G~~ai~~l~~~~g~~~vi~v~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~i~~~~~~  251 (365)
                      + +..++.++++++|+|+ +.+|+++++ +++..|++ ++.+++++++.+.++.++.+..++.  ...++...+.+..  
T Consensus       158 l~~~~~~~~~~~vlI~g~~~~iG~~~~~-~~~~~g~~-v~~~~~~~~~~~~~~~~~~~~~~~~--~~~~~~~~~~~~~--  231 (342)
T cd08266         158 LVTRARLRPGETVLVHGAGSGVGSAAIQ-IAKLFGAT-VIATAGSEDKLERAKELGADYVIDY--RKEDFVREVRELT--  231 (342)
T ss_pred             HHHhcCCCCCCEEEEECCCchHHHHHHH-HHHHcCCE-EEEEeCCHHHHHHHHHcCCCeEEec--CChHHHHHHHHHh--
Confidence            7 5688899999999987 799999999 88999995 6777788888888888887765543  3345555554432  


Q ss_pred             hCCCceEEEeCCCCHHHHHHHHHhcccCCEEEEEccCCCC-ccccchHhhhcCcEEEeeccc-CCcHHHHHHHHHcCCCC
Q 017868          252 MGTGIDVSFDCAGLNKTMSTALGATCAGGKVCLVGMGHHE-MTVPLTPAAVREVDVVGVFRY-KNTWPLCLELLRSGKID  329 (365)
Q Consensus       252 ~~~~~d~vid~~g~~~~~~~~~~~l~~~G~~~~~g~~~~~-~~~~~~~~~~~~~~i~~~~~~-~~~~~~~~~~l~~g~~~  329 (365)
                      .+.++|++++++|.. .+...+++++++|+++.++..... ..........++..+.+.... ...+.+++++++++.+ 
T Consensus       232 ~~~~~d~~i~~~g~~-~~~~~~~~l~~~G~~v~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~l-  309 (342)
T cd08266         232 GKRGVDVVVEHVGAA-TWEKSLKSLARGGRLVTCGATTGYEAPIDLRHVFWRQLSILGSTMGTKAELDEALRLVFRGKL-  309 (342)
T ss_pred             CCCCCcEEEECCcHH-HHHHHHHHhhcCCEEEEEecCCCCCCCcCHHHHhhcceEEEEEecCCHHHHHHHHHHHHcCCc-
Confidence            256899999999964 778899999999999999754332 222222345677777776544 4578889999999987 


Q ss_pred             CCCceEEEecCChhhHHHHHHHHhcCCCceEEEEeC
Q 017868          330 VKPLVTHRFGFSQKEVEEAFETSARGGTAIKVMFNL  365 (365)
Q Consensus       330 ~~~~~~~~~~~~~~~~~~a~~~~~~~~~~gk~vi~~  365 (365)
                       .+..++.|++  +++++|++.+.++...+|+++++
T Consensus       310 -~~~~~~~~~~--~~~~~a~~~~~~~~~~~kvv~~~  342 (342)
T cd08266         310 -KPVIDSVFPL--EEAAEAHRRLESREQFGKIVLTP  342 (342)
T ss_pred             -ccceeeeEcH--HHHHHHHHHHHhCCCCceEEEeC
Confidence             4557788888  99999999998888889999864

This group contains proteins related to the zinc-dependent alcohol dehydrogenases. However, while the group has structural zinc site characteristic of these enzymes, it lacks the consensus site for a catalytic zinc. NAD(P)(H)-dependent oxidoreductases are the major enzymes in the interconversion of alcohols and aldehydes, or ketones. Alcohol dehydrogenase in the liver converts ethanol and NAD+ to acetaldehyde and NADH, while in yeast and some other microorganisms ADH catalyzes the conversion acetaldehyde to ethanol in alcoholic fermentation. ADH is a member of the medium chain alcohol dehydrogenase family (MDR), which has a NAD(P)(H)-binding domain in a Rossmann fold of a beta-alpha form. The NAD(H)-binding region is comprised of 2 structurally similar halves, each of which contacts a mononucleotide. A GxGxxG motif after the first mononucleotide contact half allows the close contact of the coenzyme with the ADH backbone

>cd08293 PTGR2 Prostaglandin reductase

Probab=100.00  E-value=1e-37  Score=286.85  Aligned_cols=299  Identities=20%  Similarity=0.245  Sum_probs=227.3

Q ss_pred             CCceEEEEecCCCCC-CCcEEEEEeeeeeCcccHhhhhccccCCccCCCCcccCccceEEEEEeCCCCCCCCCCCEEEEc
Q 017868           26 VNTLKIQPFELPSLG-PYDVLVRMKAVGICGSDVHYLKTLRCADFVVKEPMVIGHECAGVIEKVGSEVKTLVPGDRVALE  104 (365)
Q Consensus        26 ~~~l~~~~~~~p~~~-~~eVlI~v~~~~l~~~D~~~~~g~~~~~~~~~~p~~~G~e~~G~V~~vG~~v~~~~~Gd~V~~~  104 (365)
                      ++.+++.+.|.|+|. ++||+|||.++|+||.|...........+...+|.++|+|++|+|+++|+++++|++||||++.
T Consensus        20 ~~~~~~~~~~~p~~~~~~evlV~v~a~gin~~d~~~~~~~~~~~~~~~~~~~~G~e~~G~V~~vG~~v~~~~~Gd~V~~~   99 (345)
T cd08293          20 AENFRVEECTLPDELNEGQVLVRTLYLSVDPYMRCRMNEDTGTDYLAPWQLSQVLDGGGVGVVEESKHQKFAVGDIVTSF   99 (345)
T ss_pred             ccceEEEeccCCCCCCCCeEEEEEEEEecCHHHHhhcccccccccCCCccCCCceEeeEEEEEeccCCCCCCCCCEEEec
Confidence            358999999999874 9999999999999999864332111111223467899999999999999999999999999763


Q ss_pred             CCcCCCCCccccCCCCCCCCCccccccCCCCcceeeEEeecCCceEECCCCCCcch-----hccchhhHHHHHHH-HhcC
Q 017868          105 PGISCWRCDHCKGGRYNLCPEMKFFATPPVHGSLANQVVHPADLCFKLPDNVSLEE-----GAMCEPLSVGLHAC-RRAN  178 (365)
Q Consensus       105 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~v~~~~~~~iP~~~~~~~-----a~~~~~~~~a~~~~-~~~~  178 (365)
                                                    .++|+||++++++.++++|+++++.+     ++...++.|||+++ +.++
T Consensus       100 ------------------------------~~~~ae~~~v~~~~~~~iP~~~~~~~~~~~~a~~~~~~~ta~~al~~~~~  149 (345)
T cd08293         100 ------------------------------NWPWQTYAVLDGSSLEKVDPQLVDGHLSYFLGAVGLPGLTALIGIQEKGH  149 (345)
T ss_pred             ------------------------------CCCceeEEEecHHHeEEcCccccccchhHHhhhcCcHHHHHHHHHHHhcc
Confidence                                          15799999999999999999864432     23334788999998 4677


Q ss_pred             CCCC--CEEEEEcC-CHHHHHHHHHHHHHCCCCeEEEEeCChhHHHHHHH-cCCCEEEeCCCCcccHHHHHHHHHHHhCC
Q 017868          179 IGPE--TNVLIMGA-GPIGLVTMLGAPRAFGAPRIVIVDVDDYRLSVAKE-IGADNIVKVSTNLQDIAEEVEKIQKAMGT  254 (365)
Q Consensus       179 ~~~g--~~vlI~G~-g~~G~~ai~~l~~~~g~~~vi~v~~~~~~~~~~~~-~g~~~~~~~~~~~~~~~~~i~~~~~~~~~  254 (365)
                      +++|  ++|||+|+ |++|++++| +++.+|+.+|+++++++++.+++++ +|++.++++..  .++.+.+++.+   ++
T Consensus       150 ~~~g~~~~VlI~ga~g~vG~~aiq-lAk~~G~~~Vi~~~~s~~~~~~~~~~lGa~~vi~~~~--~~~~~~i~~~~---~~  223 (345)
T cd08293         150 ITPGANQTMVVSGAAGACGSLAGQ-IGRLLGCSRVVGICGSDEKCQLLKSELGFDAAINYKT--DNVAERLRELC---PE  223 (345)
T ss_pred             CCCCCCCEEEEECCCcHHHHHHHH-HHHHcCCCEEEEEcCCHHHHHHHHHhcCCcEEEECCC--CCHHHHHHHHC---CC
Confidence            8877  99999987 999999999 9999999668888888999988876 99999887543  56777776653   46


Q ss_pred             CceEEEeCCCCHHHHHHHHHhcccCCEEEEEccCCC---Ccc--ccc----hHhh-hcCcEEEeec--cc----CCcHHH
Q 017868          255 GIDVSFDCAGLNKTMSTALGATCAGGKVCLVGMGHH---EMT--VPL----TPAA-VREVDVVGVF--RY----KNTWPL  318 (365)
Q Consensus       255 ~~d~vid~~g~~~~~~~~~~~l~~~G~~~~~g~~~~---~~~--~~~----~~~~-~~~~~i~~~~--~~----~~~~~~  318 (365)
                      ++|++||++|.. .+..++++|+++|+++.+|....   +..  ...    ..+. .+++......  ..    .+.+++
T Consensus       224 gvd~vid~~g~~-~~~~~~~~l~~~G~iv~~G~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  302 (345)
T cd08293         224 GVDVYFDNVGGE-ISDTVISQMNENSHIILCGQISQYNKDVPYPPPLPEATEAILKERNITRERFLVLNYKDKFEEAIAQ  302 (345)
T ss_pred             CceEEEECCCcH-HHHHHHHHhccCCEEEEEeeeecccCccCccccccchhHHHhhhcceEEEEEEeeccHhHHHHHHHH
Confidence            899999999976 67899999999999999874211   111  111    1111 2233332221  11    234677


Q ss_pred             HHHHHHcCCCCCCCceEEEecCChhhHHHHHHHHhcCCCceEEEEeC
Q 017868          319 CLELLRSGKIDVKPLVTHRFGFSQKEVEEAFETSARGGTAIKVMFNL  365 (365)
Q Consensus       319 ~~~~l~~g~~~~~~~~~~~~~~~~~~~~~a~~~~~~~~~~gk~vi~~  365 (365)
                      ++++++++.+.  +.....+++  +++.+|++.+.+++..||+|+++
T Consensus       303 ~~~l~~~g~i~--~~~~~~~~l--~~~~~A~~~~~~~~~~gkvvl~~  345 (345)
T cd08293         303 LSQWVKEGKLK--VKETVYEGL--ENAGEAFQSMMNGGNIGKQIVKV  345 (345)
T ss_pred             HHHHHHCCCcc--ceeEEeecH--HHHHHHHHHHhcCCCCCeEEEEC
Confidence            88999999984  334445577  99999999999998999999975

Prostaglandins and related eicosanoids are metabolized by the oxidation of the 15(S)-hydroxyl group of the NAD+-dependent (type I 15-PGDH) 15-prostaglandin dehydrogenase (15-PGDH) followed by reduction by NADPH/NADH-dependent (type II 15-PGDH) delta-13 15-prostaglandin reductase (13-PGR) to 15-keto-13,14,-dihydroprostaglandins. 13-PGR is a bifunctional enzyme, since it also has leukotriene B(4) 12-hydroxydehydrogenase activity. These 15-PGDH and related enzymes are members of the medium chain dehydrogenase/reductase family. The medium chain dehydrogenases/reductase (MDR)/zinc-dependent alcohol dehydrogenase-like family, which contains the zinc-dependent alcohol dehydrogenase (ADH-Zn) and related proteins, is a diverse group of proteins related to the first identified member, class I mammalian ADH. MDRs display a broad range of activities and are distinguished from the smaller short chain dehydrogenases (~ 250 amino acids vs. the ~ 350 amino acid

>cd08292 ETR_like_2 2-enoyl thioester reductase (ETR) like proteins, child 2

Probab=100.00  E-value=2e-37  Score=282.44  Aligned_cols=306  Identities=25%  Similarity=0.301  Sum_probs=248.7

Q ss_pred             ceeEEEecCC----ceEEEEecCCCCCCCcEEEEEeeeeeCcccHhhhhccccCCccCCCCcccCccceEEEEEeCCCCC
Q 017868           18 NMAAWLLGVN----TLKIQPFELPSLGPYDVLVRMKAVGICGSDVHYLKTLRCADFVVKEPMVIGHECAGVIEKVGSEVK   93 (365)
Q Consensus        18 ~~~~~~~~~~----~l~~~~~~~p~~~~~eVlI~v~~~~l~~~D~~~~~g~~~~~~~~~~p~~~G~e~~G~V~~vG~~v~   93 (365)
                      |+++++.+++    .+++.++|.|.+.++||+|||.++++|+.|+..+.|.....  ...|.++|||++|+|+++|++++
T Consensus         1 m~a~~~~~~~~~~~~~~~~~~~~p~~~~~~v~i~v~~~~~~~~d~~~~~g~~~~~--~~~p~~~G~e~~G~V~~~G~~v~   78 (324)
T cd08292           1 MRAAVHTQFGDPADVLEIGEVPKPTPGAGEVLVRTTLSPIHNHDLWTIRGTYGYK--PELPAIGGSEAVGVVDAVGEGVK   78 (324)
T ss_pred             CeeEEEccCCChhHeEEEeecCCCCCCCCeEEEEEEEccCCHHHHHHhcCcCCCC--CCCCCCCCcceEEEEEEeCCCCC
Confidence            5777877543    48899999999999999999999999999999887754311  23578999999999999999999


Q ss_pred             CCCCCCEEEEcCCcCCCCCccccCCCCCCCCCccccccCCCCcceeeEEeecCCceEECCCCCCcchhccch-hhHHHHH
Q 017868           94 TLVPGDRVALEPGISCWRCDHCKGGRYNLCPEMKFFATPPVHGSLANQVVHPADLCFKLPDNVSLEEGAMCE-PLSVGLH  172 (365)
Q Consensus        94 ~~~~Gd~V~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~v~~~~~~~iP~~~~~~~a~~~~-~~~~a~~  172 (365)
                      +|++||+|++..                            ..|+|++|+.+++..++++|+++++++++.++ ...+|++
T Consensus        79 ~~~~Gd~V~~~~----------------------------~~g~~~~~~~~~~~~~~~ip~~~~~~~aa~~~~~~~ta~~  130 (324)
T cd08292          79 GLQVGQRVAVAP----------------------------VHGTWAEYFVAPADGLVPLPDGISDEVAAQLIAMPLSALM  130 (324)
T ss_pred             CCCCCCEEEecc----------------------------CCCcceeEEEEchHHeEECCCCCCHHHhhhccccHHHHHH
Confidence            999999998752                            25899999999999999999999999988876 5677888


Q ss_pred             HHHhcCCCCCCEEEEEcC-CHHHHHHHHHHHHHCCCCeEEEEeCChhHHHHHHHcCCCEEEeCCCCcccHHHHHHHHHHH
Q 017868          173 ACRRANIGPETNVLIMGA-GPIGLVTMLGAPRAFGAPRIVIVDVDDYRLSVAKEIGADNIVKVSTNLQDIAEEVEKIQKA  251 (365)
Q Consensus       173 ~~~~~~~~~g~~vlI~G~-g~~G~~ai~~l~~~~g~~~vi~v~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~i~~~~~~  251 (365)
                      +++.+++++|++|||+|+ |.+|+++++ +|+.+|++ ++++..++++.+.++++|++.+++.  ...++.+.+++.+. 
T Consensus       131 ~~~~~~~~~g~~vlI~g~~g~ig~~~~~-~a~~~G~~-v~~~~~~~~~~~~~~~~g~~~~~~~--~~~~~~~~i~~~~~-  205 (324)
T cd08292         131 LLDFLGVKPGQWLIQNAAGGAVGKLVAM-LAAARGIN-VINLVRRDAGVAELRALGIGPVVST--EQPGWQDKVREAAG-  205 (324)
T ss_pred             HHHhhCCCCCCEEEEcccccHHHHHHHH-HHHHCCCe-EEEEecCHHHHHHHHhcCCCEEEcC--CCchHHHHHHHHhC-
Confidence            887788999999999987 999999999 99999995 5666677777787778998877764  33566666666543 


Q ss_pred             hCCCceEEEeCCCCHHHHHHHHHhcccCCEEEEEccCCC-CccccchHhhhcCcEEEeeccc-----------CCcHHHH
Q 017868          252 MGTGIDVSFDCAGLNKTMSTALGATCAGGKVCLVGMGHH-EMTVPLTPAAVREVDVVGVFRY-----------KNTWPLC  319 (365)
Q Consensus       252 ~~~~~d~vid~~g~~~~~~~~~~~l~~~G~~~~~g~~~~-~~~~~~~~~~~~~~~i~~~~~~-----------~~~~~~~  319 (365)
                       +.++|++||++|.. ....++++++++|+++.+|.... ...+.......++.++.+....           .+.+.++
T Consensus       206 -~~~~d~v~d~~g~~-~~~~~~~~l~~~g~~v~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  283 (324)
T cd08292         206 -GAPISVALDSVGGK-LAGELLSLLGEGGTLVSFGSMSGEPMQISSGDLIFKQATVRGFWGGRWSQEMSVEYRKRMIAEL  283 (324)
T ss_pred             -CCCCcEEEECCCCh-hHHHHHHhhcCCcEEEEEecCCCCCCcCCHHHHhhCCCEEEEEEcHHhhhhcCHHHHHHHHHHH
Confidence             67899999999985 67889999999999999985422 2233334456688888876532           2357889


Q ss_pred             HHHHHcCCCCCCCceEEEecCChhhHHHHHHHHhcCCCceEEEEe
Q 017868          320 LELLRSGKIDVKPLVTHRFGFSQKEVEEAFETSARGGTAIKVMFN  364 (365)
Q Consensus       320 ~~~l~~g~~~~~~~~~~~~~~~~~~~~~a~~~~~~~~~~gk~vi~  364 (365)
                      +++++++.+.+  ...+.|++  +++.+|++.+.++...+|+++.
T Consensus       284 ~~l~~~g~i~~--~~~~~~~~--~~~~~a~~~~~~~~~~~kvvv~  324 (324)
T cd08292         284 LTLALKGQLLL--PVEAVFDL--GDAAKAAAASMRPGRAGKVLLR  324 (324)
T ss_pred             HHHHHCCCccC--ccccEecH--HHHHHHHHHHHcCCCCceEEeC
Confidence            99999999843  34677888  9999999999888888999874

2-enoyl thioester reductase (ETR) like proteins. ETR catalyzes the NADPH-dependent conversion of trans-2-enoyl acyl carrier protein/coenzyme A (ACP/CoA) to acyl-(ACP/CoA) in fatty acid synthesis. 2-enoyl thioester reductase activity has been linked in Candida tropicalis as essential in maintaining mitiochondrial respiratory function. This ETR family is a part of the medium chain dehydrogenase/reductase family, but lack the zinc coordination sites characteristic of the 2-enoyl thioester reductase (ETR) like proteins. ETR catalyzes the NADPH-dependent dependent conversion of trans-2-enoyl acyl carrier protein/coenzyme A (ACP/CoA) to acyl-(ACP/CoA) in fatty acid synthesis. 2-enoyl thioester reductase activity has been linked in Candida tropicalis as essential in maintaining mitiochondrial respiratory function. This ETR family is a part of the medium chain dehydrogenase/reductase family, but lack the zinc coordina

>cd08295 double_bond_reductase_like Arabidopsis alkenal double bond reductase and leukotriene B4 12-hydroxydehydrogenase

Probab=100.00  E-value=2.9e-37  Score=282.85  Aligned_cols=296  Identities=19%  Similarity=0.179  Sum_probs=236.1

Q ss_pred             CCceEEEEecC----CCCCCCcEEEEEeeeeeCcccHhhhhccccCCccCCCCcccCccc--eEEEEEeCCCCCCCCCCC
Q 017868           26 VNTLKIQPFEL----PSLGPYDVLVRMKAVGICGSDVHYLKTLRCADFVVKEPMVIGHEC--AGVIEKVGSEVKTLVPGD   99 (365)
Q Consensus        26 ~~~l~~~~~~~----p~~~~~eVlI~v~~~~l~~~D~~~~~g~~~~~~~~~~p~~~G~e~--~G~V~~vG~~v~~~~~Gd   99 (365)
                      ++.|++.+.++    |+|+++||||||+++++||.|++...|....  ....|.++|+++  .|.+..+|+++++|++||
T Consensus        18 ~~~~~~~~~~~~~~~p~p~~~~vlv~v~~~~inp~d~~~~~g~~~~--~~~~p~~~g~~~~g~~~~~~v~~~v~~~~vGd   95 (338)
T cd08295          18 ESDLELRTTKLTLKVPPGGSGDVLVKNLYLSCDPYMRGRMKGHDDS--LYLPPFKPGEVITGYGVAKVVDSGNPDFKVGD   95 (338)
T ss_pred             ccceEEEEecCCcCCCCCCCCeEEEEEEEEeeCHHHHHhhccCCcc--ccCCCcCCCCeEeccEEEEEEecCCCCCCCCC
Confidence            35899998887    8899999999999999999999988774221  124578889754  456666889999999999


Q ss_pred             EEEEcCCcCCCCCccccCCCCCCCCCccccccCCCCcceeeEEeecC-CceEECC-CCCCcc-hhccch-hhHHHHHHH-
Q 017868          100 RVALEPGISCWRCDHCKGGRYNLCPEMKFFATPPVHGSLANQVVHPA-DLCFKLP-DNVSLE-EGAMCE-PLSVGLHAC-  174 (365)
Q Consensus       100 ~V~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~v~~-~~~~~iP-~~~~~~-~a~~~~-~~~~a~~~~-  174 (365)
                      +|+++                               |+|+||+++++ ..++++| +++++. +++.++ ++.|||+++ 
T Consensus        96 ~V~~~-------------------------------g~~aey~~v~~~~~~~~lp~~~~~~~~~aa~l~~~~~tA~~~l~  144 (338)
T cd08295          96 LVWGF-------------------------------TGWEEYSLIPRGQDLRKIDHTDVPLSYYLGLLGMPGLTAYAGFY  144 (338)
T ss_pred             EEEec-------------------------------CCceeEEEecchhceeecCCCCCCHHHHHHhcccHHHHHHHHHH
Confidence            99764                               68999999999 7999995 678876 566665 788999998 


Q ss_pred             HhcCCCCCCEEEEEcC-CHHHHHHHHHHHHHCCCCeEEEEeCChhHHHHHHH-cCCCEEEeCCCCcccHHHHHHHHHHHh
Q 017868          175 RRANIGPETNVLIMGA-GPIGLVTMLGAPRAFGAPRIVIVDVDDYRLSVAKE-IGADNIVKVSTNLQDIAEEVEKIQKAM  252 (365)
Q Consensus       175 ~~~~~~~g~~vlI~G~-g~~G~~ai~~l~~~~g~~~vi~v~~~~~~~~~~~~-~g~~~~~~~~~~~~~~~~~i~~~~~~~  252 (365)
                      +.+++++|++|||+|+ |++|++++| +|+.+|+ .++++++++++.+++++ +|++.++++.. ..++.+.+++..   
T Consensus       145 ~~~~~~~g~~VlI~Ga~G~vG~~aiq-lAk~~G~-~Vi~~~~~~~~~~~~~~~lGa~~vi~~~~-~~~~~~~i~~~~---  218 (338)
T cd08295         145 EVCKPKKGETVFVSAASGAVGQLVGQ-LAKLKGC-YVVGSAGSDEKVDLLKNKLGFDDAFNYKE-EPDLDAALKRYF---  218 (338)
T ss_pred             HhcCCCCCCEEEEecCccHHHHHHHH-HHHHcCC-EEEEEeCCHHHHHHHHHhcCCceeEEcCC-cccHHHHHHHhC---
Confidence            4688999999999987 999999999 9999999 57778888999999988 99998887532 235666665542   


Q ss_pred             CCCceEEEeCCCCHHHHHHHHHhcccCCEEEEEccCCCCc------cccchHhhhcCcEEEeeccc------CCcHHHHH
Q 017868          253 GTGIDVSFDCAGLNKTMSTALGATCAGGKVCLVGMGHHEM------TVPLTPAAVREVDVVGVFRY------KNTWPLCL  320 (365)
Q Consensus       253 ~~~~d~vid~~g~~~~~~~~~~~l~~~G~~~~~g~~~~~~------~~~~~~~~~~~~~i~~~~~~------~~~~~~~~  320 (365)
                      +.++|++||++|+ ..+..++++++++|+++.+|......      ..+...+.++++++.++...      .+.+++++
T Consensus       219 ~~gvd~v~d~~g~-~~~~~~~~~l~~~G~iv~~G~~~~~~~~~~~~~~~~~~~~~~~~~i~g~~~~~~~~~~~~~~~~~~  297 (338)
T cd08295         219 PNGIDIYFDNVGG-KMLDAVLLNMNLHGRIAACGMISQYNLEWPEGVRNLLNIIYKRVKIQGFLVGDYLHRYPEFLEEMS  297 (338)
T ss_pred             CCCcEEEEECCCH-HHHHHHHHHhccCcEEEEecccccCCCCCCCCccCHHHHhhccceeeEEEehhhHHHHHHHHHHHH
Confidence            4689999999997 57889999999999999998533211      12234566788888875432      23477889


Q ss_pred             HHHHcCCCCCCCceEEEecCChhhHHHHHHHHhcCCCceEEEEeC
Q 017868          321 ELLRSGKIDVKPLVTHRFGFSQKEVEEAFETSARGGTAIKVMFNL  365 (365)
Q Consensus       321 ~~l~~g~~~~~~~~~~~~~~~~~~~~~a~~~~~~~~~~gk~vi~~  365 (365)
                      +++++|.+.  +...+.|++  +++.+|++.+++++..||+|+++
T Consensus       298 ~l~~~g~l~--~~~~~~~~l--~~~~~A~~~~~~~~~~GkvVl~~  338 (338)
T cd08295         298 GYIKEGKLK--YVEDIADGL--ESAPEAFVGLFTGSNIGKQVVKV  338 (338)
T ss_pred             HHHHCCCeE--ceeecccCH--HHHHHHHHHHhcCCCCceEEEEC
Confidence            999999984  445556777  99999999999998999999975

This group includes proteins identified as the Arabidopsis alkenal double bond reductase and leukotriene B4 12-hydroxydehydrogenase. The Arabidopsis enzyme, a member of the medium chain dehydrogenase/reductase family, catalyzes the reduction of 7-8-double bond of phenylpropanal substrates as a plant defense mechanism. Prostaglandins and related eicosanoids (lipid mediators involved in host defense and inflamation) are metabolized by the oxidation of the 15(S)-hydroxyl group of the NAD+-dependent (type I 15-PGDH) 15-prostaglandin dehydrogenase (15-PGDH) followed by reduction by NADPH/NADH-dependent (type II 15-PGDH) delta-13 15-prostaglandin reductase (13-PGR) to 15-keto-13,14,-dihydroprostaglandins. 13-PGR is a bifunctional enzyme, since it also has leukotriene B(4) 12-hydroxydehydrogenase activity. Leukotriene B4 (LTB4) can be metabolized by LTB4 20-hydroxylase in

>TIGR02825 B4_12hDH leukotriene B4 12-hydroxydehydrogenase/15-oxo-prostaglandin 13-reductase

Probab=100.00  E-value=1.8e-37  Score=282.77  Aligned_cols=289  Identities=19%  Similarity=0.236  Sum_probs=231.2

Q ss_pred             cCCceEEEEecCCCCCCCcEEEEEeeeeeCcccHhhhhccccCCccCCCCcccCccceEEEEEeCCCCCCCCCCCEEEEc
Q 017868           25 GVNTLKIQPFELPSLGPYDVLVRMKAVGICGSDVHYLKTLRCADFVVKEPMVIGHECAGVIEKVGSEVKTLVPGDRVALE  104 (365)
Q Consensus        25 ~~~~l~~~~~~~p~~~~~eVlI~v~~~~l~~~D~~~~~g~~~~~~~~~~p~~~G~e~~G~V~~vG~~v~~~~~Gd~V~~~  104 (365)
                      +++.+++.+.|.|+|++|||+|||.++++||.+..   |.+.   ....|.++|+|++|+|+++|+   +|++||||+++
T Consensus        15 ~~~~l~~~~~~~p~~~~~evlv~v~a~~~n~~~~~---g~~~---~~~~~~i~G~~~~g~v~~~~~---~~~~GdrV~~~   85 (325)
T TIGR02825        15 TDSDFELKTVELPPLNNGEVLLEALFLSVDPYMRV---AAKR---LKEGDTMMGQQVARVVESKNV---ALPKGTIVLAS   85 (325)
T ss_pred             CCCceEEEeccCCCCCCCcEEEEEEEEecCHHHhc---ccCc---CCCCCcEecceEEEEEEeCCC---CCCCCCEEEEe
Confidence            55789999999999999999999999999996543   3211   123467999999999999774   59999999864


Q ss_pred             CCcCCCCCccccCCCCCCCCCccccccCCCCcceeeEEeecCCceEEC----CCCCCcchh-ccch-hhHHHHHHH-Hhc
Q 017868          105 PGISCWRCDHCKGGRYNLCPEMKFFATPPVHGSLANQVVHPADLCFKL----PDNVSLEEG-AMCE-PLSVGLHAC-RRA  177 (365)
Q Consensus       105 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~v~~~~~~~i----P~~~~~~~a-~~~~-~~~~a~~~~-~~~  177 (365)
                                                     ++|++|+.++.+.+.++    |+++++++| +.++ ++.|||+++ +.+
T Consensus        86 -------------------------------~~~~~~~~~~~~~~~~l~~~~p~~~~~~~aaa~l~~~~~TA~~~l~~~~  134 (325)
T TIGR02825        86 -------------------------------PGWTSHSISDGKDLEKLLTEWPDTLPLSLALGTVGMPGLTAYFGLLEIC  134 (325)
T ss_pred             -------------------------------cCceeeEEechhheEEccccccCCCCHHHHHHhcccHHHHHHHHHHHHh
Confidence                                           46899999999988887    899999887 4554 789999997 678


Q ss_pred             CCCCCCEEEEEcC-CHHHHHHHHHHHHHCCCCeEEEEeCChhHHHHHHHcCCCEEEeCCCCcccHHHHHHHHHHHhCCCc
Q 017868          178 NIGPETNVLIMGA-GPIGLVTMLGAPRAFGAPRIVIVDVDDYRLSVAKEIGADNIVKVSTNLQDIAEEVEKIQKAMGTGI  256 (365)
Q Consensus       178 ~~~~g~~vlI~G~-g~~G~~ai~~l~~~~g~~~vi~v~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~i~~~~~~~~~~~  256 (365)
                      ++++|++|||+|+ |++|++++| +++..|+ +++++++++++.++++++|++.++++... .++.+.++..   .++++
T Consensus       135 ~~~~g~~VLI~ga~g~vG~~aiq-lAk~~G~-~Vi~~~~s~~~~~~~~~lGa~~vi~~~~~-~~~~~~~~~~---~~~gv  208 (325)
T TIGR02825       135 GVKGGETVMVNAAAGAVGSVVGQ-IAKLKGC-KVVGAAGSDEKVAYLKKLGFDVAFNYKTV-KSLEETLKKA---SPDGY  208 (325)
T ss_pred             CCCCCCEEEEeCCccHHHHHHHH-HHHHcCC-EEEEEeCCHHHHHHHHHcCCCEEEecccc-ccHHHHHHHh---CCCCe
Confidence            8999999999986 999999999 9999999 57778888999999999999998886432 2454444443   25689


Q ss_pred             eEEEeCCCCHHHHHHHHHhcccCCEEEEEccCCC-----Ccc--ccchHhhhcCcEEEeeccc-------CCcHHHHHHH
Q 017868          257 DVSFDCAGLNKTMSTALGATCAGGKVCLVGMGHH-----EMT--VPLTPAAVREVDVVGVFRY-------KNTWPLCLEL  322 (365)
Q Consensus       257 d~vid~~g~~~~~~~~~~~l~~~G~~~~~g~~~~-----~~~--~~~~~~~~~~~~i~~~~~~-------~~~~~~~~~~  322 (365)
                      |++||++|+. .+..++++++++|+++.+|....     ...  .....++++.+++.++...       .+.+++++++
T Consensus       209 dvv~d~~G~~-~~~~~~~~l~~~G~iv~~G~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~l  287 (325)
T TIGR02825       209 DCYFDNVGGE-FSNTVIGQMKKFGRIAICGAISTYNRTGPLPPGPPPEIVIYQELRMEGFIVNRWQGEVRQKALKELLKW  287 (325)
T ss_pred             EEEEECCCHH-HHHHHHHHhCcCcEEEEecchhhcccCCCCCCCcchHHHhhhcceEeEEEehhhhhhhhHHHHHHHHHH
Confidence            9999999975 67899999999999999985321     111  1233466778888876522       2357889999


Q ss_pred             HHcCCCCCCCceEEEecCChhhHHHHHHHHhcCCCceEEEEe
Q 017868          323 LRSGKIDVKPLVTHRFGFSQKEVEEAFETSARGGTAIKVMFN  364 (365)
Q Consensus       323 l~~g~~~~~~~~~~~~~~~~~~~~~a~~~~~~~~~~gk~vi~  364 (365)
                      +++|.+.  +....+|++  +++.+|++.+++++..||+|+.
T Consensus       288 ~~~g~l~--~~~~~~~~l--~~~~~A~~~~~~~~~~gkvVv~  325 (325)
T TIGR02825       288 VLEGKIQ--YKEYVIEGF--ENMPAAFMGMLKGENLGKTIVK  325 (325)
T ss_pred             HHCCCcc--cceeccccH--HHHHHHHHHHhcCCCCCeEEeC
Confidence            9999994  445566777  9999999999999999999974

Leukotriene B4 12-hydroxydehydrogenase is an NADP-dependent enzyme of arachidonic acid metabolism, responsible for converting leukotriene B4 to the much less active metabolite 12-oxo-leukotriene B4. The BRENDA database lists leukotriene B4 12-hydroxydehydrogenase as one of the synonyms of 2-alkenal reductase (EC 1.3.1.74), while 1.3.1.48 is 15-oxoprostaglandin 13-reductase.

>cd08294 leukotriene_B4_DH_like 13-PGR is a bifunctional enzyme with delta-13 15-prostaglandin reductase and leukotriene B4 12 hydroxydehydrogenase activity

Probab=100.00  E-value=8.1e-37  Score=279.08  Aligned_cols=297  Identities=20%  Similarity=0.252  Sum_probs=235.2

Q ss_pred             cceeEEEecC-------CceEEEEecCCCCCCCcEEEEEeeeeeCcccHhhhhccccCCccCCCCcccCccceEEEEEeC
Q 017868           17 VNMAAWLLGV-------NTLKIQPFELPSLGPYDVLVRMKAVGICGSDVHYLKTLRCADFVVKEPMVIGHECAGVIEKVG   89 (365)
Q Consensus        17 ~~~~~~~~~~-------~~l~~~~~~~p~~~~~eVlI~v~~~~l~~~D~~~~~g~~~~~~~~~~p~~~G~e~~G~V~~vG   89 (365)
                      +|+++++...       +.+++.+.+.|+|+++||+|||.++++||.|.....     . ....|.++|+|++|+|++  
T Consensus         2 ~~~~~~~~~~~~~~~~~~~l~~~~~~~p~~~~~evlVkv~a~~in~~~~~~~~-----~-~~~~p~v~G~e~~G~V~~--   73 (329)
T cd08294           2 KAKTWVLKKHFDGKPKESDFELVEEELPPLKDGEVLCEALFLSVDPYMRPYSK-----R-LNEGDTMIGTQVAKVIES--   73 (329)
T ss_pred             CceEEEEecCCCCCCCccceEEEecCCCCCCCCcEEEEEEEEecCHHHhcccc-----c-CCCCCcEecceEEEEEec--
Confidence            4667666651       468999999999999999999999999988754211     1 124578999999999984  


Q ss_pred             CCCCCCCCCCEEEEcCCcCCCCCccccCCCCCCCCCccccccCCCCcceeeEEeecCC---ceEECCCCCC--c----ch
Q 017868           90 SEVKTLVPGDRVALEPGISCWRCDHCKGGRYNLCPEMKFFATPPVHGSLANQVVHPAD---LCFKLPDNVS--L----EE  160 (365)
Q Consensus        90 ~~v~~~~~Gd~V~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~v~~~---~~~~iP~~~~--~----~~  160 (365)
                       .+++|++||||+..                               ++|++|+.++++   .++++|++++  +    ..
T Consensus        74 -~~~~~~~Gd~V~~~-------------------------------~~~~~~~~~~~~~~~~~~~iP~~~~~~~~~~~~~  121 (329)
T cd08294          74 -KNSKFPVGTIVVAS-------------------------------FGWRTHTVSDGKDQPDLYKLPADLPDDLPPSLAL  121 (329)
T ss_pred             -CCCCCCCCCEEEee-------------------------------CCeeeEEEECCccccceEECCccccccCChHHHH
Confidence             45689999999763                               578999999999   9999999988  2    22


Q ss_pred             hccchhhHHHHHHH-HhcCCCCCCEEEEEcC-CHHHHHHHHHHHHHCCCCeEEEEeCChhHHHHHHHcCCCEEEeCCCCc
Q 017868          161 GAMCEPLSVGLHAC-RRANIGPETNVLIMGA-GPIGLVTMLGAPRAFGAPRIVIVDVDDYRLSVAKEIGADNIVKVSTNL  238 (365)
Q Consensus       161 a~~~~~~~~a~~~~-~~~~~~~g~~vlI~G~-g~~G~~ai~~l~~~~g~~~vi~v~~~~~~~~~~~~~g~~~~~~~~~~~  238 (365)
                      ++...++.|||+++ +.+++++|++|||+|+ |++|++++| +++..|+ .++++++++++.++++++|++.++++..  
T Consensus       122 a~~~~~~~ta~~al~~~~~~~~g~~vlI~ga~g~vG~~aiq-lA~~~G~-~vi~~~~s~~~~~~l~~~Ga~~vi~~~~--  197 (329)
T cd08294         122 GVLGMPGLTAYFGLLEICKPKAGETVVVNGAAGAVGSLVGQ-IAKIKGC-KVIGCAGSDDKVAWLKELGFDAVFNYKT--  197 (329)
T ss_pred             HhcccHHHHHHHHHHHhcCCCCCCEEEEecCccHHHHHHHH-HHHHcCC-EEEEEeCCHHHHHHHHHcCCCEEEeCCC--
Confidence            32334888999998 5688999999999986 999999999 9999999 5788888999999999999999887543  


Q ss_pred             ccHHHHHHHHHHHhCCCceEEEeCCCCHHHHHHHHHhcccCCEEEEEccCCC---C-c---cccchHhhhcCcEEEeecc
Q 017868          239 QDIAEEVEKIQKAMGTGIDVSFDCAGLNKTMSTALGATCAGGKVCLVGMGHH---E-M---TVPLTPAAVREVDVVGVFR  311 (365)
Q Consensus       239 ~~~~~~i~~~~~~~~~~~d~vid~~g~~~~~~~~~~~l~~~G~~~~~g~~~~---~-~---~~~~~~~~~~~~~i~~~~~  311 (365)
                      +++.+.+++..   +.++|++||++|+ ..+..++++++++|+++.+|....   . .   ..+...++.+++++.++..
T Consensus       198 ~~~~~~v~~~~---~~gvd~vld~~g~-~~~~~~~~~l~~~G~iv~~g~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~  273 (329)
T cd08294         198 VSLEEALKEAA---PDGIDCYFDNVGG-EFSSTVLSHMNDFGRVAVCGSISTYNDKEPKKGPYVQETIIFKQLKMEGFIV  273 (329)
T ss_pred             ccHHHHHHHHC---CCCcEEEEECCCH-HHHHHHHHhhccCCEEEEEcchhccCCCCCCcCcccHHHHhhhcceEEEEEh
Confidence            56766666543   4689999999997 578899999999999999874211   1 0   1223346778888887653


Q ss_pred             c------CCcHHHHHHHHHcCCCCCCCceEEEecCChhhHHHHHHHHhcCCCceEEEEeC
Q 017868          312 Y------KNTWPLCLELLRSGKIDVKPLVTHRFGFSQKEVEEAFETSARGGTAIKVMFNL  365 (365)
Q Consensus       312 ~------~~~~~~~~~~l~~g~~~~~~~~~~~~~~~~~~~~~a~~~~~~~~~~gk~vi~~  365 (365)
                      .      .+.+++++++++++.+.+  ....+|++  +++.+|++.+.+++..||+|+++
T Consensus       274 ~~~~~~~~~~~~~~~~l~~~g~i~~--~~~~~~~l--~~~~~A~~~~~~~~~~gkvvv~~  329 (329)
T cd08294         274 YRWQDRWPEALKQLLKWIKEGKLKY--REHVTEGF--ENMPQAFIGMLKGENTGKAIVKV  329 (329)
T ss_pred             hhhHHHHHHHHHHHHHHHHCCCCcC--CcccccCH--HHHHHHHHHHHcCCCCCeEEEeC
Confidence            2      234678899999999953  34455777  99999999999999999999975

Prostaglandins and related eicosanoids are metabolized by the oxidation of the 15(S)-hydroxyl group of the NAD+-dependent (type I 15-PGDH) 15-prostaglandin dehydrogenase (15-PGDH) followed by reduction by NADPH/NADH-dependent (type II 15-PGDH) delta-13 15-prostaglandin reductase (13-PGR) to 15-keto- 13,14,-dihydroprostaglandins. 13-PGR is a bifunctional enzyme, since it also has leukotriene B(4) 12-hydroxydehydrogenase activity. These 15-PGDH and related enzymes are members of the medium chain dehydrogenase/reductase family. The medium chain dehydrogenases/reductase (MDR)/zinc-dependent alcohol dehydrogenase-like family, which contains the zinc-dependent alcohol dehydrogenase (ADH-Zn) and related proteins, is a diverse group of proteins related to the first identified member, class I mammalian ADH. MDRs display a broad range of ac

>cd08264 Zn_ADH_like2 Alcohol dehydrogenases of the MDR family

Probab=100.00  E-value=1.1e-36  Score=277.72  Aligned_cols=318  Identities=26%  Similarity=0.409  Sum_probs=256.2

Q ss_pred             ceeEEEecC--CceEEEEecCCCCCCCcEEEEEeeeeeCcccHhhhhccccCCccCCCCcccCccceEEEEEeCCCCCCC
Q 017868           18 NMAAWLLGV--NTLKIQPFELPSLGPYDVLVRMKAVGICGSDVHYLKTLRCADFVVKEPMVIGHECAGVIEKVGSEVKTL   95 (365)
Q Consensus        18 ~~~~~~~~~--~~l~~~~~~~p~~~~~eVlI~v~~~~l~~~D~~~~~g~~~~~~~~~~p~~~G~e~~G~V~~vG~~v~~~   95 (365)
                      |+++++..+  +.+++.+.+.|+++++||+||+.++++|+.|+....+..    ...+|.++|||++|+|+++|+++++|
T Consensus         1 ~~~~~~~~~~~~~~~~~~~~~~~~~~~ev~v~v~~~~i~~~d~~~~~~~~----~~~~~~~~g~e~~G~v~~vG~~v~~~   76 (325)
T cd08264           1 MKALVFEKSGIENLKVEDVKDPKPGPGEVLIRVKMAGVNPVDYNVINAVK----VKPMPHIPGAEFAGVVEEVGDHVKGV   76 (325)
T ss_pred             CeeEEeccCCCCceEEEeccCCCCCCCeEEEEEEEEEechHHHHHHhCCC----CCCCCeecccceeEEEEEECCCCCCC
Confidence            467777644  478888889888999999999999999999998876311    12347789999999999999999999


Q ss_pred             CCCCEEEEcCCcCCCCCccccCCCCCCCCCccccccCCCCcceeeEEeecCCceEECCCCCCcchhccch-hhHHHHHHH
Q 017868           96 VPGDRVALEPGISCWRCDHCKGGRYNLCPEMKFFATPPVHGSLANQVVHPADLCFKLPDNVSLEEGAMCE-PLSVGLHAC  174 (365)
Q Consensus        96 ~~Gd~V~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~v~~~~~~~iP~~~~~~~a~~~~-~~~~a~~~~  174 (365)
                      ++||+|++.+...|++|.+|..++.++|.+....+. ...|+|++|+.++++.++++|+++++++++.++ .+.+|++++
T Consensus        77 ~~Gd~V~~~~~~~~~~c~~~~~~~~~~~~~~~~~~~-~~~g~~~~~~~v~~~~~~~~p~~~~~~~~~~~~~~~~~a~~~l  155 (325)
T cd08264          77 KKGDRVVVYNRVFDGTCDMCLSGNEMLCRNGGIIGV-VSNGGYAEYIVVPEKNLFKIPDSISDELAASLPVAALTAYHAL  155 (325)
T ss_pred             CCCCEEEECCCcCCCCChhhcCCCccccCccceeec-cCCCceeeEEEcCHHHceeCCCCCCHHHhhhhhhhhHHHHHHH
Confidence            999999999999999999999999999998665543 356899999999999999999999999988876 678899998


Q ss_pred             HhcCCCCCCEEEEEcC-CHHHHHHHHHHHHHCCCCeEEEEeCChhHHHHHHHcCCCEEEeCCCCcccHHHHHHHHHHHhC
Q 017868          175 RRANIGPETNVLIMGA-GPIGLVTMLGAPRAFGAPRIVIVDVDDYRLSVAKEIGADNIVKVSTNLQDIAEEVEKIQKAMG  253 (365)
Q Consensus       175 ~~~~~~~g~~vlI~G~-g~~G~~ai~~l~~~~g~~~vi~v~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~i~~~~~~~~  253 (365)
                      +.+++++|++|+|+|+ |.+|+++++ +|+..|++ ++++.    +.+.++++|++.+++.+    ++.+.+++.   . 
T Consensus       156 ~~~~~~~g~~vlI~g~~g~vg~~~~~-~a~~~G~~-v~~~~----~~~~~~~~g~~~~~~~~----~~~~~l~~~---~-  221 (325)
T cd08264         156 KTAGLGPGETVVVFGASGNTGIFAVQ-LAKMMGAE-VIAVS----RKDWLKEFGADEVVDYD----EVEEKVKEI---T-  221 (325)
T ss_pred             HhcCCCCCCEEEEECCCchHHHHHHH-HHHHcCCe-EEEEe----HHHHHHHhCCCeeecch----HHHHHHHHH---h-
Confidence            7788999999999997 999999999 99999995 55554    23667889988776532    223444443   2 


Q ss_pred             CCceEEEeCCCCHHHHHHHHHhcccCCEEEEEccCCC-CccccchHhhhcCcEEEeeccc-CCcHHHHHHHHHcCCCCCC
Q 017868          254 TGIDVSFDCAGLNKTMSTALGATCAGGKVCLVGMGHH-EMTVPLTPAAVREVDVVGVFRY-KNTWPLCLELLRSGKIDVK  331 (365)
Q Consensus       254 ~~~d~vid~~g~~~~~~~~~~~l~~~G~~~~~g~~~~-~~~~~~~~~~~~~~~i~~~~~~-~~~~~~~~~~l~~g~~~~~  331 (365)
                      +++|+++|++|. ..+...+++|+++|+++.+|.... ...++...+..++.++.+.... .+.++++++++....    
T Consensus       222 ~~~d~vl~~~g~-~~~~~~~~~l~~~g~~v~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~----  296 (325)
T cd08264         222 KMADVVINSLGS-SFWDLSLSVLGRGGRLVTFGTLTGGEVKLDLSDLYSKQISIIGSTGGTRKELLELVKIAKDLK----  296 (325)
T ss_pred             CCCCEEEECCCH-HHHHHHHHhhccCCEEEEEecCCCCCCccCHHHHhhcCcEEEEccCCCHHHHHHHHHHHHcCC----
Confidence            679999999996 488899999999999999985321 2344444556677777776544 467888999995333    


Q ss_pred             CceEEEecCChhhHHHHHHHHhcCCCceEE
Q 017868          332 PLVTHRFGFSQKEVEEAFETSARGGTAIKV  361 (365)
Q Consensus       332 ~~~~~~~~~~~~~~~~a~~~~~~~~~~gk~  361 (365)
                      ..+.+.|++  +++++|++.+.++...+|+
T Consensus       297 ~~~~~~~~~--~~~~~a~~~~~~~~~~~kv  324 (325)
T cd08264         297 VKVWKTFKL--EEAKEALKELFSKERDGRI  324 (325)
T ss_pred             ceeEEEEcH--HHHHHHHHHHHcCCCcccc
Confidence            345677888  9999999999888777775

This group resembles the zinc-dependent alcohol dehydrogenases of the medium chain dehydrogenase family. However, this subgroup does not contain the characteristic catalytic zinc site. Also, it contains an atypical structural zinc-binding pattern: DxxCxxCxxxxxxxC. NAD(P)(H)-dependent oxidoreductases are the major enzymes in the interconversion of alcohols and aldehydes, or ketones. Alcohol dehydrogenase in the liver converts ethanol and NAD+ to acetaldehyde and NADH, while in yeast and some other microorganisms ADH catalyzes the conversion acetaldehyde to ethanol in alcoholic fermentation. ADH is a member of the medium chain alcohol dehydrogenase family (MDR), which has a NAD(P)(H)-binding domain in a Rossmann fold of a beta-alpha form. The NAD(H)-binding region is comprised of 2 structurally similar halves, each of which contacts a mononucleotide. A GxGxxG motif after the first mononucleotide contact half allows the clo

>cd08274 MDR9 Medium chain dehydrogenases/reductase (MDR)/zinc-dependent alcohol dehydrogenase-like family

Probab=100.00  E-value=1.4e-36  Score=279.98  Aligned_cols=325  Identities=22%  Similarity=0.307  Sum_probs=254.4

Q ss_pred             ceeEEEecC---CceEEEE-ecCCCCCCCcEEEEEeeeeeCcccHhhhhccccC-----------------CccCCCCcc
Q 017868           18 NMAAWLLGV---NTLKIQP-FELPSLGPYDVLVRMKAVGICGSDVHYLKTLRCA-----------------DFVVKEPMV   76 (365)
Q Consensus        18 ~~~~~~~~~---~~l~~~~-~~~p~~~~~eVlI~v~~~~l~~~D~~~~~g~~~~-----------------~~~~~~p~~   76 (365)
                      |+++++..+   ..+.+.+ .+.|.+.+++|+|||.++++|++|+....|....                 ......|.+
T Consensus         1 ~~a~~~~~~~~~~~~~~~~~~~~~~~~~~~v~i~v~~~~~~~~d~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~p~~   80 (350)
T cd08274           1 MRAVLLTGHGGLDKLVYRDDVPVPTPAPGEVLIRVGACGVNNTDINTREGWYSTEVDGATDSTGAGEAGWWGGTLSFPRI   80 (350)
T ss_pred             CeEEEEeccCCccceeecccCCCCCCCCCeEEEEEEeccCCHHHHHHhcCCCCCccccccccccccccccccCCCCCCcc
Confidence            467777654   3556654 5777889999999999999999999888764321                 012456889


Q ss_pred             cCccceEEEEEeCCCCCCCCCCCEEEEcCCcCCCCCccccCCCCCCCCCccccccCCCCcceeeEEeecCCceEECCCCC
Q 017868           77 IGHECAGVIEKVGSEVKTLVPGDRVALEPGISCWRCDHCKGGRYNLCPEMKFFATPPVHGSLANQVVHPADLCFKLPDNV  156 (365)
Q Consensus        77 ~G~e~~G~V~~vG~~v~~~~~Gd~V~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~v~~~~~~~iP~~~  156 (365)
                      +|||++|+|+++|+++++|++||+|++.+...|+.|..|...        ...+. ..+|+|++|+.++++.++++|+++
T Consensus        81 ~G~e~~G~V~~vG~~v~~~~~Gd~V~~~~~~~~~~~~~~~~~--------~~~~~-~~~g~~~~~~~v~~~~~~~ip~~~  151 (350)
T cd08274          81 QGADIVGRVVAVGEGVDTARIGERVLVDPSIRDPPEDDPADI--------DYIGS-ERDGGFAEYTVVPAENAYPVNSPL  151 (350)
T ss_pred             cCCcceEEEEEeCCCCCCCCCCCEEEEecCcCCCCccccccc--------cccCC-CCCccceEEEEecHHHceeCCCCC
Confidence            999999999999999999999999999888888877664321        11221 235999999999999999999999


Q ss_pred             Ccchhccch-hhHHHHHHHHhcCCCCCCEEEEEcC-CHHHHHHHHHHHHHCCCCeEEEEeCChhHHHHHHHcCCCEEEeC
Q 017868          157 SLEEGAMCE-PLSVGLHACRRANIGPETNVLIMGA-GPIGLVTMLGAPRAFGAPRIVIVDVDDYRLSVAKEIGADNIVKV  234 (365)
Q Consensus       157 ~~~~a~~~~-~~~~a~~~~~~~~~~~g~~vlI~G~-g~~G~~ai~~l~~~~g~~~vi~v~~~~~~~~~~~~~g~~~~~~~  234 (365)
                      ++.+++.++ .+.+||++++..++++|++|||+|+ |++|+++++ +++.+|++ +++++.++ +.+.++++|++.+.+.
T Consensus       152 ~~~~~a~l~~~~~ta~~~~~~~~~~~g~~vlI~g~~g~ig~~~~~-~a~~~g~~-vi~~~~~~-~~~~~~~~g~~~~~~~  228 (350)
T cd08274         152 SDVELATFPCSYSTAENMLERAGVGAGETVLVTGASGGVGSALVQ-LAKRRGAI-VIAVAGAA-KEEAVRALGADTVILR  228 (350)
T ss_pred             CHHHHHhcccHHHHHHHHHhhcCCCCCCEEEEEcCCcHHHHHHHH-HHHhcCCE-EEEEeCch-hhHHHHhcCCeEEEeC
Confidence            998888775 8888999887788999999999998 999999999 99999996 56665555 7888899998754432


Q ss_pred             CCCcccHHHHHHHHHHHhCCCceEEEeCCCCHHHHHHHHHhcccCCEEEEEccCCCC-ccccchHhhhcCcEEEeeccc-
Q 017868          235 STNLQDIAEEVEKIQKAMGTGIDVSFDCAGLNKTMSTALGATCAGGKVCLVGMGHHE-MTVPLTPAAVREVDVVGVFRY-  312 (365)
Q Consensus       235 ~~~~~~~~~~i~~~~~~~~~~~d~vid~~g~~~~~~~~~~~l~~~G~~~~~g~~~~~-~~~~~~~~~~~~~~i~~~~~~-  312 (365)
                        ....+..  ..  .+.+.++|++||++|+. .+..++++++++|+++.+|..... ..++...++.+++++.+.... 
T Consensus       229 --~~~~~~~--~~--~~~~~~~d~vi~~~g~~-~~~~~~~~l~~~G~~v~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~  301 (350)
T cd08274         229 --DAPLLAD--AK--ALGGEPVDVVADVVGGP-LFPDLLRLLRPGGRYVTAGAIAGPVVELDLRTLYLKDLTLFGSTLGT  301 (350)
T ss_pred             --CCccHHH--HH--hhCCCCCcEEEecCCHH-HHHHHHHHhccCCEEEEecccCCccccCCHHHhhhcceEEEEeecCC
Confidence              2222222  22  22367899999999974 788999999999999998754322 234444556788888887655 


Q ss_pred             CCcHHHHHHHHHcCCCCCCCceEEEecCChhhHHHHHHHHhcCCCceEEEEeC
Q 017868          313 KNTWPLCLELLRSGKIDVKPLVTHRFGFSQKEVEEAFETSARGGTAIKVMFNL  365 (365)
Q Consensus       313 ~~~~~~~~~~l~~g~~~~~~~~~~~~~~~~~~~~~a~~~~~~~~~~gk~vi~~  365 (365)
                      .+.+.++++++.++.+  .+.+.+.|++  +++++|++.+.++...+|+|+++
T Consensus       302 ~~~~~~~~~l~~~~~l--~~~~~~~~~~--~~~~~a~~~~~~~~~~~kvvi~~  350 (350)
T cd08274         302 REVFRRLVRYIEEGEI--RPVVAKTFPL--SEIREAQAEFLEKRHVGKLVLVP  350 (350)
T ss_pred             HHHHHHHHHHHHCCCc--ccccccccCH--HHHHHHHHHHhcCCCceEEEEeC
Confidence            5678999999999988  4556777877  99999999999888899999864

This group is a member of the medium chain dehydrogenases/reductase (MDR)/zinc-dependent alcohol dehydrogenase-like family, but lacks the zinc-binding sites of the zinc-dependent alcohol dehydrogenases. The medium chain dehydrogenases/reductase (MDR)/zinc-dependent alcohol dehydrogenase-like family, which contains the zinc-dependent alcohol dehydrogenase (ADH-Zn) and related proteins, is a diverse group of proteins related to the first identified member, class I mammalian ADH. MDRs display a broad range of activities and are distinguished from the smaller short chain dehydrogenases (~ 250 amino acids vs. the ~ 350 amino acids of the MDR). The MDR proteins have 2 domains: a C-terminal NAD(P)-binding Rossmann fold domain of a beta-alpha form and an N-terminal catalytic domain with distant homology to GroES. The MDR group contains a host of activities, including the founding alcoh

>cd08245 CAD Cinnamyl alcohol dehydrogenases (CAD) and related proteins

Probab=100.00  E-value=4.5e-36  Score=274.31  Aligned_cols=325  Identities=26%  Similarity=0.410  Sum_probs=265.6

Q ss_pred             eeEEEecC-CceEEEEecCCCCCCCcEEEEEeeeeeCcccHhhhhccccCCccCCCCcccCccceEEEEEeCCCCCCCCC
Q 017868           19 MAAWLLGV-NTLKIQPFELPSLGPYDVLVRMKAVGICGSDVHYLKTLRCADFVVKEPMVIGHECAGVIEKVGSEVKTLVP   97 (365)
Q Consensus        19 ~~~~~~~~-~~l~~~~~~~p~~~~~eVlI~v~~~~l~~~D~~~~~g~~~~~~~~~~p~~~G~e~~G~V~~vG~~v~~~~~   97 (365)
                      |++++.++ ..+++.+.|.|.+.++||+|++.++++|+.|+....|...   ...+|.++|+|++|+|+++|+++++|++
T Consensus         1 ~~~~~~~~~~~~~~~~~~~~~~~~~~v~v~v~~~~i~~~d~~~~~g~~~---~~~~p~~~g~e~~G~v~~~g~~~~~~~~   77 (330)
T cd08245           1 KAAVVHAAGGPLEPEEVPVPEPGPGEVLIKIEACGVCHTDLHAAEGDWG---GSKYPLVPGHEIVGEVVEVGAGVEGRKV   77 (330)
T ss_pred             CeEEEecCCCCceEEeccCCCCCCCeEEEEEEEEeccHHHHHHHcCCCC---CCCCCcccCccceEEEEEECCCCccccc
Confidence            46777776 6899999999999999999999999999999998876532   1345778999999999999999999999


Q ss_pred             CCEEEEcCC-cCCCCCccccCCCCCCCCCccccccCCCCcceeeEEeecCCceEECCCCCCcchhccch-hhHHHHHHHH
Q 017868           98 GDRVALEPG-ISCWRCDHCKGGRYNLCPEMKFFATPPVHGSLANQVVHPADLCFKLPDNVSLEEGAMCE-PLSVGLHACR  175 (365)
Q Consensus        98 Gd~V~~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~v~~~~~~~iP~~~~~~~a~~~~-~~~~a~~~~~  175 (365)
                      ||+|+..+. .+|++|++|..+..++|++....+. ...|+|++|+.+++++++++|+++++++++.+. ...+|+++++
T Consensus        78 Gd~V~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~~~g~~~~~~~v~~~~~~~~p~~~~~~~~~~l~~~~~ta~~~l~  156 (330)
T cd08245          78 GDRVGVGWLVGSCGRCEYCRRGLENLCQKAVNTGY-TTQGGYAEYMVADAEYTVLLPDGLPLAQAAPLLCAGITVYSALR  156 (330)
T ss_pred             CCEEEEccccCCCCCChhhhCcCcccCcCccccCc-ccCCccccEEEEcHHHeEECCCCCCHHHhhhhhhhHHHHHHHHH
Confidence            999987543 6799999999999999998655443 246899999999999999999999999988765 6778998887


Q ss_pred             hcCCCCCCEEEEEcCCHHHHHHHHHHHHHCCCCeEEEEeCChhHHHHHHHcCCCEEEeCCCCcccHHHHHHHHHHHhCCC
Q 017868          176 RANIGPETNVLIMGAGPIGLVTMLGAPRAFGAPRIVIVDVDDYRLSVAKEIGADNIVKVSTNLQDIAEEVEKIQKAMGTG  255 (365)
Q Consensus       176 ~~~~~~g~~vlI~G~g~~G~~ai~~l~~~~g~~~vi~v~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~i~~~~~~~~~~  255 (365)
                      ..+++++++|||+|+|.+|+++++ +++..|+ .++++++++++.++++++|++.+++...  .+...   .    ..++
T Consensus       157 ~~~~~~~~~vlI~g~g~iG~~~~~-~a~~~G~-~v~~~~~~~~~~~~~~~~g~~~~~~~~~--~~~~~---~----~~~~  225 (330)
T cd08245         157 DAGPRPGERVAVLGIGGLGHLAVQ-YARAMGF-ETVAITRSPDKRELARKLGADEVVDSGA--ELDEQ---A----AAGG  225 (330)
T ss_pred             hhCCCCCCEEEEECCCHHHHHHHH-HHHHCCC-EEEEEeCCHHHHHHHHHhCCcEEeccCC--cchHH---h----ccCC
Confidence            788999999999988889999999 9999999 5778788899999999999887765432  22211   1    1357


Q ss_pred             ceEEEeCCCCHHHHHHHHHhcccCCEEEEEccCCCCc-cccchHhhhcCcEEEeeccc-CCcHHHHHHHHHcCCCCCCCc
Q 017868          256 IDVSFDCAGLNKTMSTALGATCAGGKVCLVGMGHHEM-TVPLTPAAVREVDVVGVFRY-KNTWPLCLELLRSGKIDVKPL  333 (365)
Q Consensus       256 ~d~vid~~g~~~~~~~~~~~l~~~G~~~~~g~~~~~~-~~~~~~~~~~~~~i~~~~~~-~~~~~~~~~~l~~g~~~~~~~  333 (365)
                      +|+++|+++.......++++++++|+++.++...... .+....+..++.++.+.... .+.+++++++++++.+.  + 
T Consensus       226 ~d~vi~~~~~~~~~~~~~~~l~~~G~~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ll~~~~l~--~-  302 (330)
T cd08245         226 ADVILVTVVSGAAAEAALGGLRRGGRIVLVGLPESPPFSPDIFPLIMKRQSIAGSTHGGRADLQEALDFAAEGKVK--P-  302 (330)
T ss_pred             CCEEEECCCcHHHHHHHHHhcccCCEEEEECCCCCCccccchHHHHhCCCEEEEeccCCHHHHHHHHHHHHcCCCc--c-
Confidence            9999999887678889999999999999997542221 22233466677888777654 56788899999999984  3 


Q ss_pred             eEEEecCChhhHHHHHHHHhcCCCceEEEE
Q 017868          334 VTHRFGFSQKEVEEAFETSARGGTAIKVMF  363 (365)
Q Consensus       334 ~~~~~~~~~~~~~~a~~~~~~~~~~gk~vi  363 (365)
                      ..+.|++  +++.+|++.+.++...+|+|+
T Consensus       303 ~~~~~~~--~~~~~a~~~~~~~~~~~~~v~  330 (330)
T cd08245         303 MIETFPL--DQANEAYERMEKGDVRFRFVL  330 (330)
T ss_pred             eEEEEcH--HHHHHHHHHHHcCCCCcceeC
Confidence            4467777  999999999999999999875

Cinnamyl alcohol dehydrogenases (CAD), members of the medium chain dehydrogenase/reductase family, reduce cinnamaldehydes to cinnamyl alcohols in the last step of monolignal metabolism in plant cells walls. CAD binds 2 zinc ions and is NADPH- dependent. CAD family members are also found in non-plant species, e.g. in yeast where they have an aldehyde reductase activity. The medium chain dehydrogenases/reductase (MDR)/zinc-dependent alcohol dehydrogenase-like family, which contains the zinc-dependent alcohol dehydrogenase (ADH-Zn) and related proteins, is a diverse group of proteins related to the first identified member, class I mammalian ADH. MDRs display a broad range of activities and are distinguished from the smaller short chain dehydrogenases (~ 250 amino acids vs. the ~ 350 amino acids of the MDR). The MDR proteins have 2 domains: a C-terminal NAD(P) binding-Rossmann fold domain of a beta-alpha form and an

>cd08258 Zn_ADH4 Alcohol dehydrogenases of the MDR family

Probab=100.00  E-value=5.8e-36  Score=270.24  Aligned_cols=298  Identities=37%  Similarity=0.638  Sum_probs=245.6

Q ss_pred             ceeEEEecC--CceEEEEecCCCCCCCcEEEEEeeeeeCcccHhhhhccccCCccCCCCcccCccceEEEEEeCCCCCCC
Q 017868           18 NMAAWLLGV--NTLKIQPFELPSLGPYDVLVRMKAVGICGSDVHYLKTLRCADFVVKEPMVIGHECAGVIEKVGSEVKTL   95 (365)
Q Consensus        18 ~~~~~~~~~--~~l~~~~~~~p~~~~~eVlI~v~~~~l~~~D~~~~~g~~~~~~~~~~p~~~G~e~~G~V~~vG~~v~~~   95 (365)
                      |++++..++  ..+++.+++.|++.++||+|||.++++|+.|+....|...   ....|.++|+|++|+|+++|++++.|
T Consensus         1 ~~~~~~~~~~~~~~~~~~~~~p~~~~~~v~V~v~~~~l~~~d~~~~~g~~~---~~~~p~~~G~e~~G~V~~vG~~v~~~   77 (306)
T cd08258           1 MKALVKTGPGPGNVELREVPEPEPGPGEVLIKVAAAGICGSDLHIYKGDYD---PVETPVVLGHEFSGTIVEVGPDVEGW   77 (306)
T ss_pred             CeeEEEecCCCCceEEeecCCCCCCCCeEEEEEEEEEechhhHHHHcCCCC---cCCCCeeeccceEEEEEEECCCcCcC
Confidence            367777743  4699999999999999999999999999999988876431   13457889999999999999999999


Q ss_pred             CCCCEEEEcCC-cCCCCCccccCCCCCCCCCccccccCCCCcceeeEEeecCCceEECCCCCCcchhccchhhHHHHHHH
Q 017868           96 VPGDRVALEPG-ISCWRCDHCKGGRYNLCPEMKFFATPPVHGSLANQVVHPADLCFKLPDNVSLEEGAMCEPLSVGLHAC  174 (365)
Q Consensus        96 ~~Gd~V~~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~v~~~~~~~iP~~~~~~~a~~~~~~~~a~~~~  174 (365)
                      ++||+|++.+. .+|+.|++|..+..+.|+.....+ ....|+|++|+.+++.+++++|+++++++++...++.+|++++
T Consensus        78 ~~Gd~V~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~~~~g~~~~~~~v~~~~~~~lp~~~~~~~aa~~~~~~~a~~~l  156 (306)
T cd08258          78 KVGDRVVSETTFSTCGRCPYCRRGDYNLCPHRKGIG-TQADGGFAEYVLVPEESLHELPENLSLEAAALTEPLAVAVHAV  156 (306)
T ss_pred             CCCCEEEEccCcCCCCCCcchhCcCcccCCCCceee-ecCCCceEEEEEcchHHeEECcCCCCHHHHHhhchHHHHHHHH
Confidence            99999999874 789999999999998897643333 2346999999999999999999999999888556888899987


Q ss_pred             -HhcCCCCCCEEEEEcCCHHHHHHHHHHHHHCCCCeEEEE--eCChhHHHHHHHcCCCEEEeCCCCcccHHHHHHHHHHH
Q 017868          175 -RRANIGPETNVLIMGAGPIGLVTMLGAPRAFGAPRIVIV--DVDDYRLSVAKEIGADNIVKVSTNLQDIAEEVEKIQKA  251 (365)
Q Consensus       175 -~~~~~~~g~~vlI~G~g~~G~~ai~~l~~~~g~~~vi~v--~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~i~~~~~~  251 (365)
                       ..++++++++|||.|+|.+|+++++ +++..|++ ++.+  ++++++.++++++|++.+ ++  ...++...+.+..  
T Consensus       157 ~~~~~~~~g~~vlI~g~g~~g~~~~~-la~~~G~~-v~~~~~~~~~~~~~~~~~~g~~~~-~~--~~~~~~~~l~~~~--  229 (306)
T cd08258         157 AERSGIRPGDTVVVFGPGPIGLLAAQ-VAKLQGAT-VVVVGTEKDEVRLDVAKELGADAV-NG--GEEDLAELVNEIT--  229 (306)
T ss_pred             HHhcCCCCCCEEEEECCCHHHHHHHH-HHHHcCCE-EEEECCCCCHHHHHHHHHhCCccc-CC--CcCCHHHHHHHHc--
Confidence             5688999999999888999999999 99999996 5454  345668888899999776 54  3456767666553  


Q ss_pred             hCCCceEEEeCCCCHHHHHHHHHhcccCCEEEEEccCC-CCccccchHhhhcCcEEEeeccc-CCcHHHHHHHHHcC
Q 017868          252 MGTGIDVSFDCAGLNKTMSTALGATCAGGKVCLVGMGH-HEMTVPLTPAAVREVDVVGVFRY-KNTWPLCLELLRSG  326 (365)
Q Consensus       252 ~~~~~d~vid~~g~~~~~~~~~~~l~~~G~~~~~g~~~-~~~~~~~~~~~~~~~~i~~~~~~-~~~~~~~~~~l~~g  326 (365)
                      .+.++|++||++|....+...+++|+++|+++.+|... ....++...++++++++.|++.. .++++++++++++|
T Consensus       230 ~~~~vd~vld~~g~~~~~~~~~~~l~~~G~~v~~g~~~~~~~~~~~~~~~~~~~~i~g~~~~~~~~~~~~~~~~~~~  306 (306)
T cd08258         230 DGDGADVVIECSGAVPALEQALELLRKGGRIVQVGIFGPLAASIDVERIIQKELSVIGSRSSTPASWETALRLLASG  306 (306)
T ss_pred             CCCCCCEEEECCCChHHHHHHHHHhhcCCEEEEEcccCCCCcccCHHHHhhcCcEEEEEecCchHhHHHHHHHHhcC
Confidence            25789999999987678889999999999999998754 23444566778899999999876 67799999998865

This group shares the zinc coordination sites of the zinc-dependent alcohol dehydrogenases. The medium chain dehydrogenases/reductase (MDR)/zinc-dependent alcohol dehydrogenase-like family, which contains the zinc-dependent alcohol dehydrogenase (ADH-Zn) and related proteins, is a diverse group of proteins related to the first identified member, class I mammalian ADH. MDRs display a broad range of activities and are distinguished from the smaller short chain dehydrogenases (~ 250 amino acids vs. the ~ 350 amino acids of the MDR). The MDR proteins have 2 domains: a C-terminal NAD(P)-binding Rossmann fold domain of an beta-alpha form and an N-terminal catalytic domain with distant homology to GroES. The MDR group contains a host of activities, including the founding alcohol dehydrogenase (ADH), quinone reductase, sorbitol dehydrogenase, formaldehyde dehydrogenase, butanediol DH, ketose reductase, cinnamyl reductase, and numerous

>cd08244 MDR_enoyl_red Possible enoyl reductase

Probab=100.00  E-value=4.5e-35  Score=266.94  Aligned_cols=311  Identities=25%  Similarity=0.299  Sum_probs=248.6

Q ss_pred             ceeEEEecC---CceEEEEecCCCCCCCcEEEEEeeeeeCcccHhhhhccccCCccCCCCcccCccceEEEEEeCCCCCC
Q 017868           18 NMAAWLLGV---NTLKIQPFELPSLGPYDVLVRMKAVGICGSDVHYLKTLRCADFVVKEPMVIGHECAGVIEKVGSEVKT   94 (365)
Q Consensus        18 ~~~~~~~~~---~~l~~~~~~~p~~~~~eVlI~v~~~~l~~~D~~~~~g~~~~~~~~~~p~~~G~e~~G~V~~vG~~v~~   94 (365)
                      |+++++.++   ..+++.+.+.|.+.++||+|+|.++++|+.|+....|..........|.++|+|++|+|+++|++++.
T Consensus         1 ~~a~~~~~~~~~~~~~~~~~~~~~~~~~~v~v~v~~~~i~~~d~~~~~g~~~~~~~~~~p~~~g~e~~G~v~~~G~~v~~   80 (324)
T cd08244           1 MRAIRLHEFGPPEVLVPEDVPDPVPGPGQVRIAVAAAGVHFVDTQLRSGWGPGPFPPELPYVPGGEVAGVVDAVGPGVDP   80 (324)
T ss_pred             CeEEEEcCCCCccceEEeccCCCCCCCCEEEEEEEEEeCCHHHHHHhCCCCCCCCCCCCCcCCccceEEEEEEeCCCCCC
Confidence            567777753   46777788888889999999999999999999888775322222355788999999999999999999


Q ss_pred             CCCCCEEEEcCCcCCCCCccccCCCCCCCCCccccccCCCCcceeeEEeecCCceEECCCCCCcchhccch-hhHHHHHH
Q 017868           95 LVPGDRVALEPGISCWRCDHCKGGRYNLCPEMKFFATPPVHGSLANQVVHPADLCFKLPDNVSLEEGAMCE-PLSVGLHA  173 (365)
Q Consensus        95 ~~~Gd~V~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~v~~~~~~~iP~~~~~~~a~~~~-~~~~a~~~  173 (365)
                      +++||+|++...                          ...|+|++|+.++.++++++|+++++++++.++ .+.+|+..
T Consensus        81 ~~~Gd~V~~~~~--------------------------~~~g~~~~~~~v~~~~~~~lp~~~~~~~a~~~~~~~~ta~~~  134 (324)
T cd08244          81 AWLGRRVVAHTG--------------------------RAGGGYAELAVADVDSLHPVPDGLDLEAAVAVVHDGRTALGL  134 (324)
T ss_pred             CCCCCEEEEccC--------------------------CCCceeeEEEEEchHHeEeCCCCCCHHHHhhhcchHHHHHHH
Confidence            999999988521                          135899999999999999999999999988775 67778655


Q ss_pred             HHhcCCCCCCEEEEEcC-CHHHHHHHHHHHHHCCCCeEEEEeCChhHHHHHHHcCCCEEEeCCCCcccHHHHHHHHHHHh
Q 017868          174 CRRANIGPETNVLIMGA-GPIGLVTMLGAPRAFGAPRIVIVDVDDYRLSVAKEIGADNIVKVSTNLQDIAEEVEKIQKAM  252 (365)
Q Consensus       174 ~~~~~~~~g~~vlI~G~-g~~G~~ai~~l~~~~g~~~vi~v~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~i~~~~~~~  252 (365)
                      ++.++++++++|||+|+ |.+|+++++ +++..|+ .++++++++++.+.++++|++.+++..  ..++.+.+.+..  .
T Consensus       135 ~~~~~~~~~~~vlI~g~~~~~g~~~~~-la~~~g~-~v~~~~~~~~~~~~~~~~g~~~~~~~~--~~~~~~~~~~~~--~  208 (324)
T cd08244         135 LDLATLTPGDVVLVTAAAGGLGSLLVQ-LAKAAGA-TVVGAAGGPAKTALVRALGADVAVDYT--RPDWPDQVREAL--G  208 (324)
T ss_pred             HHhcCCCCCCEEEEEcCCchHHHHHHH-HHHHCCC-EEEEEeCCHHHHHHHHHcCCCEEEecC--CccHHHHHHHHc--C
Confidence            57788999999999986 999999999 9999999 578888889999999999998776643  345655555443  2


Q ss_pred             CCCceEEEeCCCCHHHHHHHHHhcccCCEEEEEccCCCC-ccccchHhhhcCcEEEeeccc-------CCcHHHHHHHHH
Q 017868          253 GTGIDVSFDCAGLNKTMSTALGATCAGGKVCLVGMGHHE-MTVPLTPAAVREVDVVGVFRY-------KNTWPLCLELLR  324 (365)
Q Consensus       253 ~~~~d~vid~~g~~~~~~~~~~~l~~~G~~~~~g~~~~~-~~~~~~~~~~~~~~i~~~~~~-------~~~~~~~~~~l~  324 (365)
                      +.++|+++|++|+. ....++++++++|+++.+|..... ..++...+..++..+.+....       .+.+.+++++++
T Consensus       209 ~~~~d~vl~~~g~~-~~~~~~~~l~~~g~~v~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~  287 (324)
T cd08244         209 GGGVTVVLDGVGGA-IGRAALALLAPGGRFLTYGWASGEWTALDEDDARRRGVTVVGLLGVQAERGGLRALEARALAEAA  287 (324)
T ss_pred             CCCceEEEECCChH-hHHHHHHHhccCcEEEEEecCCCCCCccCHHHHhhCCcEEEEeecccCCHHHHHHHHHHHHHHHH
Confidence            56899999999976 568899999999999999854322 123333456777777766432       245778899999


Q ss_pred             cCCCCCCCceEEEecCChhhHHHHHHHHhcCCCceEEEEeC
Q 017868          325 SGKIDVKPLVTHRFGFSQKEVEEAFETSARGGTAIKVMFNL  365 (365)
Q Consensus       325 ~g~~~~~~~~~~~~~~~~~~~~~a~~~~~~~~~~gk~vi~~  365 (365)
                      ++.+  .+.+.+.|++  +++.+|++.+.++...+|+++++
T Consensus       288 ~~~l--~~~~~~~~~~--~~~~~a~~~~~~~~~~~kvv~~~  324 (324)
T cd08244         288 AGRL--VPVVGQTFPL--ERAAEAHAALEARSTVGKVLLLP  324 (324)
T ss_pred             CCCc--cCccceEEeH--HHHHHHHHHHHcCCCCceEEEeC
Confidence            9988  4456678888  99999999999999999999874

Member identified as possible enoyl reductase of the MDR family. 2-enoyl thioester reductase (ETR) catalyzes the NADPH-dependent dependent conversion of trans-2-enoyl acyl carrier protein/coenzyme A (ACP/CoA) to acyl-(ACP/CoA) in fatty acid synthesis. 2-enoyl thioester reductase activity has been linked in Candida tropicalis as essential in maintaining mitiochondrial respiratory function. This ETR family is a part of the medium chain dehydrogenase/reductase family, but lack the zinc coordination sites characteristic of the alcohol dehydrogenases in this family. NAD(P)(H)-dependent oxidoreductases are the major enzymes in the interconversion of alcohols and aldehydes, or ketones. Alcohol dehydrogenase in the liver converts ethanol and NAD+ to acetaldehyde and NADH, while in yeast and some other microorganisms ADH catalyzes the conversion acetaldehyde to ethanol in alcoholic fermentation. ADH is a member of the medium chain alcohol dehydr

>cd08269 Zn_ADH9 Alcohol dehydrogenases of the MDR family

Probab=100.00  E-value=5.1e-35  Score=265.15  Aligned_cols=301  Identities=29%  Similarity=0.454  Sum_probs=243.5

Q ss_pred             ecCCceEEEEecCCCCCCCcEEEEEeeeeeCcccHhhh-hccccCCccCCCCcccCccceEEEEEeCCCCCCCCCCCEEE
Q 017868           24 LGVNTLKIQPFELPSLGPYDVLVRMKAVGICGSDVHYL-KTLRCADFVVKEPMVIGHECAGVIEKVGSEVKTLVPGDRVA  102 (365)
Q Consensus        24 ~~~~~l~~~~~~~p~~~~~eVlI~v~~~~l~~~D~~~~-~g~~~~~~~~~~p~~~G~e~~G~V~~vG~~v~~~~~Gd~V~  102 (365)
                      .+++.+++.+++.|++.++||+|||.++++|+.|+..+ .|..... ...+|.++|+|++|+|+++|++++++++||+|+
T Consensus         2 ~~~~~~~~~~~~~~~l~~~ev~v~v~~~~i~~~d~~~~~~g~~~~~-~~~~~~~~g~e~~G~V~~vG~~v~~~~~Gd~V~   80 (312)
T cd08269           2 TGPGRFEVEEHPRPTPGPGQVLVRVEGCGVCGSDLPAFNQGRPWFV-YPAEPGGPGHEGWGRVVALGPGVRGLAVGDRVA   80 (312)
T ss_pred             CCCCeeEEEECCCCCCCCCeEEEEEEEeeecccchHHHccCCCCcc-cCCCCcccceeeEEEEEEECCCCcCCCCCCEEE
Confidence            35568999999999999999999999999999999877 5532211 123477899999999999999999999999998


Q ss_pred             EcCCcCCCCCccccCCCCCCCCCccccccCCCCcceeeEEeecCCceEECCCCCCcchhccc-hhhHHHHHHHHhcCCCC
Q 017868          103 LEPGISCWRCDHCKGGRYNLCPEMKFFATPPVHGSLANQVVHPADLCFKLPDNVSLEEGAMC-EPLSVGLHACRRANIGP  181 (365)
Q Consensus       103 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~v~~~~~~~iP~~~~~~~a~~~-~~~~~a~~~~~~~~~~~  181 (365)
                      ++                             ..|+|++|+.++++.++++|+++  ..++.. .++.+++++++.+++++
T Consensus        81 ~~-----------------------------~~g~~~~~~~v~~~~~~~lP~~~--~~~~~~~~~~~~a~~~~~~~~~~~  129 (312)
T cd08269          81 GL-----------------------------SGGAFAEYDLADADHAVPLPSLL--DGQAFPGEPLGCALNVFRRGWIRA  129 (312)
T ss_pred             Ee-----------------------------cCCcceeeEEEchhheEECCCch--hhhHHhhhhHHHHHHHHHhcCCCC
Confidence            75                             24889999999999999999998  233333 57788888888888999


Q ss_pred             CCEEEEEcCCHHHHHHHHHHHHHCCCCeEEEEeCChhHHHHHHHcCCCEEEeCCCCcccHHHHHHHHHHHhCCCceEEEe
Q 017868          182 ETNVLIMGAGPIGLVTMLGAPRAFGAPRIVIVDVDDYRLSVAKEIGADNIVKVSTNLQDIAEEVEKIQKAMGTGIDVSFD  261 (365)
Q Consensus       182 g~~vlI~G~g~~G~~ai~~l~~~~g~~~vi~v~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~i~~~~~~~~~~~d~vid  261 (365)
                      ++++||+|+|.+|+++++ +++..|++.++++.+++++.++++++|++.+++.  ...++.+.+.++..  +.++|+++|
T Consensus       130 ~~~vlI~g~g~vg~~~~~-la~~~g~~~v~~~~~~~~~~~~~~~~g~~~~~~~--~~~~~~~~l~~~~~--~~~vd~vld  204 (312)
T cd08269         130 GKTVAVIGAGFIGLLFLQ-LAAAAGARRVIAIDRRPARLALARELGATEVVTD--DSEAIVERVRELTG--GAGADVVIE  204 (312)
T ss_pred             CCEEEEECCCHHHHHHHH-HHHHcCCcEEEEECCCHHHHHHHHHhCCceEecC--CCcCHHHHHHHHcC--CCCCCEEEE
Confidence            999999988999999999 9999999657778888889999999999877653  33567677766532  578999999


Q ss_pred             CCCCHHHHHHHHHhcccCCEEEEEccCC-CCccccchHhhhcCcEEEeeccc-----CCcHHHHHHHHHcCCCCCCCceE
Q 017868          262 CAGLNKTMSTALGATCAGGKVCLVGMGH-HEMTVPLTPAAVREVDVVGVFRY-----KNTWPLCLELLRSGKIDVKPLVT  335 (365)
Q Consensus       262 ~~g~~~~~~~~~~~l~~~G~~~~~g~~~-~~~~~~~~~~~~~~~~i~~~~~~-----~~~~~~~~~~l~~g~~~~~~~~~  335 (365)
                      +.|........+++|+++|+++.+|... ....+......++++++.+....     .+.+++++++++++.+.+.....
T Consensus       205 ~~g~~~~~~~~~~~l~~~g~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~  284 (312)
T cd08269         205 AVGHQWPLDLAGELVAERGRLVIFGYHQDGPRPVPFQTWNWKGIDLINAVERDPRIGLEGMREAVKLIADGRLDLGSLLT  284 (312)
T ss_pred             CCCCHHHHHHHHHHhccCCEEEEEccCCCCCcccCHHHHhhcCCEEEEecccCccchhhHHHHHHHHHHcCCCCchhhee
Confidence            9987778889999999999999998543 22233444667888888776543     35789999999999985333456


Q ss_pred             EEecCChhhHHHHHHHHhcCC-CceEEEE
Q 017868          336 HRFGFSQKEVEEAFETSARGG-TAIKVMF  363 (365)
Q Consensus       336 ~~~~~~~~~~~~a~~~~~~~~-~~gk~vi  363 (365)
                      +.|++  +++.+|++.+.+++ .++|+++
T Consensus       285 ~~~~~--~~~~~a~~~~~~~~~~~~~~~~  311 (312)
T cd08269         285 HEFPL--EELGDAFEAARRRPDGFIKGVI  311 (312)
T ss_pred             eeecH--HHHHHHHHHHHhCCCCceEEEe
Confidence            77888  99999999998884 4789886

The medium chain dehydrogenases/reductase (MDR)/zinc-dependent alcohol dehydrogenase-like family, which contains the zinc-dependent alcohol dehydrogenase (ADH-Zn) and related proteins, is a diverse group of proteins related to the first identified member, class I mammalian ADH. MDRs display a broad range of activities and are distinguished from the smaller short chain dehydrogenases (~ 250 amino acids vs. the ~ 350 amino acids of the MDR). The MDR proteins have 2 domains: a C-terminal NAD(P)-binding Rossmann fold domain of a beta-alpha form and an N-terminal catalytic domain with distant homology to GroES. The MDR group contains a host of activities, including the founding alcohol dehydrogenase (ADH), quinone reductase, sorbitol dehydrogenase, formaldehyde dehydrogenase, butanediol DH, ketose reductase, cinnamyl reductase, and numerous others. The zinc-dependent alcohol dehydrogenases (ADHs) catalyze the NAD(P)(H)-dependent i

>TIGR02817 adh_fam_1 zinc-binding alcohol dehydrogenase family protein

Probab=100.00  E-value=4.5e-35  Score=268.37  Aligned_cols=298  Identities=19%  Similarity=0.302  Sum_probs=235.4

Q ss_pred             CCceEEEEecCCCCCCCcEEEEEeeeeeCcccHhhhhccccCCccCCCCcccCccceEEEEEeCCCCCCCCCCCEEEEcC
Q 017868           26 VNTLKIQPFELPSLGPYDVLVRMKAVGICGSDVHYLKTLRCADFVVKEPMVIGHECAGVIEKVGSEVKTLVPGDRVALEP  105 (365)
Q Consensus        26 ~~~l~~~~~~~p~~~~~eVlI~v~~~~l~~~D~~~~~g~~~~~~~~~~p~~~G~e~~G~V~~vG~~v~~~~~Gd~V~~~~  105 (365)
                      ++.++..++|.|+++++||+|||.++++|+.|+....|...   ...+|.++|+|++|+|+++|++++.|++||+|++..
T Consensus        14 ~~~~~~~~~~~p~~~~~ev~Ikv~~~~i~~~d~~~~~g~~~---~~~~~~~~g~e~~G~V~~vG~~v~~~~~Gd~V~~~~   90 (336)
T TIGR02817        14 PDALVDIDLPKPKPGGRDLLVEVKAISVNPVDTKVRARMAP---EAGQPKILGWDAAGVVVAVGDEVTLFKPGDEVWYAG   90 (336)
T ss_pred             cccceecccCCCCCCCCEEEEEEEEEEcChHHHHHHcCCCC---CCCCCcccceeeEEEEEEeCCCCCCCCCCCEEEEcC
Confidence            45788899999999999999999999999999988876421   134577899999999999999999999999998742


Q ss_pred             CcCCCCCccccCCCCCCCCCccccccCCCCcceeeEEeecCCceEECCCCCCcchhccch-hhHHHHHHH-HhcCCCC--
Q 017868          106 GISCWRCDHCKGGRYNLCPEMKFFATPPVHGSLANQVVHPADLCFKLPDNVSLEEGAMCE-PLSVGLHAC-RRANIGP--  181 (365)
Q Consensus       106 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~v~~~~~~~iP~~~~~~~a~~~~-~~~~a~~~~-~~~~~~~--  181 (365)
                      .                         ....|+|++|+.++++.++++|+++++++++.++ ...+||+++ ...++++  
T Consensus        91 ~-------------------------~~~~g~~~~~~~v~~~~~~~ip~~~~~~~aa~~~~~~~ta~~~l~~~~~~~~~~  145 (336)
T TIGR02817        91 D-------------------------IDRPGSNAEFHLVDERIVGHKPKSLSFAEAAALPLTSITAWELLFDRLGINDPV  145 (336)
T ss_pred             C-------------------------CCCCCcccceEEEcHHHcccCCCCCCHHHHhhhhHHHHHHHHHHHHhcCCCCCC
Confidence            1                         0135899999999999999999999999998886 778899988 5677776  


Q ss_pred             ---CCEEEEEcC-CHHHHHHHHHHHHHC-CCCeEEEEeCChhHHHHHHHcCCCEEEeCCCCcccHHHHHHHHHHHhCCCc
Q 017868          182 ---ETNVLIMGA-GPIGLVTMLGAPRAF-GAPRIVIVDVDDYRLSVAKEIGADNIVKVSTNLQDIAEEVEKIQKAMGTGI  256 (365)
Q Consensus       182 ---g~~vlI~G~-g~~G~~ai~~l~~~~-g~~~vi~v~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~i~~~~~~~~~~~  256 (365)
                         |++|||+|+ |++|++++| +++.+ |+ .++++.+++++.++++++|+++++++.   .++...+++.   .++++
T Consensus       146 ~~~g~~vlV~ga~g~vg~~~~~-~ak~~~G~-~vi~~~~~~~~~~~l~~~g~~~~~~~~---~~~~~~i~~~---~~~~v  217 (336)
T TIGR02817       146 AGDKRALLIIGGAGGVGSILIQ-LARQLTGL-TVIATASRPESQEWVLELGAHHVIDHS---KPLKAQLEKL---GLEAV  217 (336)
T ss_pred             CCCCCEEEEEcCCcHHHHHHHH-HHHHhCCC-EEEEEcCcHHHHHHHHHcCCCEEEECC---CCHHHHHHHh---cCCCC
Confidence               999999986 999999999 99987 98 577777888899999999998887753   2566666652   35689


Q ss_pred             eEEEeCCCCHHHHHHHHHhcccCCEEEEEccCCCCccccchHhhhcCcEEEeeccc-------------CCcHHHHHHHH
Q 017868          257 DVSFDCAGLNKTMSTALGATCAGGKVCLVGMGHHEMTVPLTPAAVREVDVVGVFRY-------------KNTWPLCLELL  323 (365)
Q Consensus       257 d~vid~~g~~~~~~~~~~~l~~~G~~~~~g~~~~~~~~~~~~~~~~~~~i~~~~~~-------------~~~~~~~~~~l  323 (365)
                      |+++|+++........+++++++|+++.++..   ..++...+..+++.+.+....             ...++++++++
T Consensus       218 d~vl~~~~~~~~~~~~~~~l~~~G~~v~~~~~---~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~  294 (336)
T TIGR02817       218 SYVFSLTHTDQHFKEIVELLAPQGRFALIDDP---AELDISPFKRKSISLHWEFMFTRSMFQTADMIEQHHLLNRVARLV  294 (336)
T ss_pred             CEEEEcCCcHHHHHHHHHHhccCCEEEEEccc---ccccchhhhhcceEEEEEEeecccccchhhhhhhHHHHHHHHHHH
Confidence            99999987666888999999999999987432   122333333344444432110             13578899999


Q ss_pred             HcCCCCCCCceEEEec-CChhhHHHHHHHHhcCCCceEEEEe
Q 017868          324 RSGKIDVKPLVTHRFG-FSQKEVEEAFETSARGGTAIKVMFN  364 (365)
Q Consensus       324 ~~g~~~~~~~~~~~~~-~~~~~~~~a~~~~~~~~~~gk~vi~  364 (365)
                      +++.+.  +.+.+.++ ++++++.+|++.+.+++..||++++
T Consensus       295 ~~~~l~--~~~~~~~~~~~~~~~~~a~~~~~~~~~~gkvvv~  334 (336)
T TIGR02817       295 DAGKIR--TTLAETFGTINAANLKRAHALIESGKARGKIVLE  334 (336)
T ss_pred             HCCCee--ccchhccCCCCHHHHHHHHHHHHcCCccceEEEe
Confidence            999883  44444454 2348999999999999889999875

Members of this model form a distinct subset of the larger family of oxidoreductases that includes zinc-binding alcohol dehydrogenases and NADPH:quinone reductases (pfam00107). While some current members of this family carry designations as putative alginate lyase, it seems no sequence with a direct characterization as such is detected by this model.

>cd08290 ETR 2-enoyl thioester reductase (ETR)

Probab=100.00  E-value=8e-35  Score=267.22  Aligned_cols=311  Identities=23%  Similarity=0.332  Sum_probs=244.4

Q ss_pred             ceeEEEecCCc----eEEEEecCCCCCC-CcEEEEEeeeeeCcccHhhhhccccCCcc--CCCCcccCccceEEEEEeCC
Q 017868           18 NMAAWLLGVNT----LKIQPFELPSLGP-YDVLVRMKAVGICGSDVHYLKTLRCADFV--VKEPMVIGHECAGVIEKVGS   90 (365)
Q Consensus        18 ~~~~~~~~~~~----l~~~~~~~p~~~~-~eVlI~v~~~~l~~~D~~~~~g~~~~~~~--~~~p~~~G~e~~G~V~~vG~   90 (365)
                      |+++++.+++.    +.+.+.|.|+|.+ +||+||+.++++|+.|+..+.|.......  ...|.++|||++|+|+++|+
T Consensus         1 ~~a~~~~~~~~~~~~~~~~~~~~p~~~~~~~v~v~v~~~gi~~~d~~~~~g~~~~~~~~~~~~~~~~g~e~~G~V~~vG~   80 (341)
T cd08290           1 AKALVYTEHGEPKEVLQLESYEIPPPGPPNEVLVKMLAAPINPADINQIQGVYPIKPPTTPEPPAVGGNEGVGEVVKVGS   80 (341)
T ss_pred             CceEEEccCCCchhheEEeecCCCCCCCCCEEEEEEEecCCCHHHHHHhcCcCCCCCcccCCCCCCCCcceEEEEEEeCC
Confidence            67888886643    8999999999887 99999999999999999988765321110  11577899999999999999


Q ss_pred             CCCCCCCCCEEEEcCCcCCCCCccccCCCCCCCCCccccccCCCCcceeeEEeecCCceEECCCCCCcchhccch-hhHH
Q 017868           91 EVKTLVPGDRVALEPGISCWRCDHCKGGRYNLCPEMKFFATPPVHGSLANQVVHPADLCFKLPDNVSLEEGAMCE-PLSV  169 (365)
Q Consensus        91 ~v~~~~~Gd~V~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~v~~~~~~~iP~~~~~~~a~~~~-~~~~  169 (365)
                      ++..|++||+|++...                           ..|+|++|+.++++.++++|+++++++++.++ ...+
T Consensus        81 ~v~~~~~Gd~V~~~~~---------------------------~~g~~~~~~~v~~~~~~~lp~~~~~~~aa~~~~~~~t  133 (341)
T cd08290          81 GVKSLKPGDWVIPLRP---------------------------GLGTWRTHAVVPADDLIKVPNDVDPEQAATLSVNPCT  133 (341)
T ss_pred             CCCCCCCCCEEEecCC---------------------------CCccchheEeccHHHeEeCCCCCCHHHHHHhhccHHH
Confidence            9999999999987521                           24899999999999999999999999988876 7788


Q ss_pred             HHHHHH-hcCCCCCCEEEEEcC-CHHHHHHHHHHHHHCCCCeEEEEeCCh----hHHHHHHHcCCCEEEeCCCC-cccHH
Q 017868          170 GLHACR-RANIGPETNVLIMGA-GPIGLVTMLGAPRAFGAPRIVIVDVDD----YRLSVAKEIGADNIVKVSTN-LQDIA  242 (365)
Q Consensus       170 a~~~~~-~~~~~~g~~vlI~G~-g~~G~~ai~~l~~~~g~~~vi~v~~~~----~~~~~~~~~g~~~~~~~~~~-~~~~~  242 (365)
                      |++++. ...+++|++|||+|+ |++|+++++ +++..|++.++.+ +++    ++.++++++|++.+++.... ..++.
T Consensus       134 a~~~l~~~~~~~~g~~vlI~g~~g~vg~~~~~-~a~~~g~~v~~~~-~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~  211 (341)
T cd08290         134 AYRLLEDFVKLQPGDWVIQNGANSAVGQAVIQ-LAKLLGIKTINVV-RDRPDLEELKERLKALGADHVLTEEELRSLLAT  211 (341)
T ss_pred             HHHHHHhhcccCCCCEEEEccchhHHHHHHHH-HHHHcCCeEEEEE-cCCCcchhHHHHHHhcCCCEEEeCcccccccHH
Confidence            999984 478899999999987 999999999 9999999654444 444    67888889999988775331 01455


Q ss_pred             HHHHHHHHHhCCCceEEEeCCCCHHHHHHHHHhcccCCEEEEEccCCC-CccccchHhhhcCcEEEeeccc---------
Q 017868          243 EEVEKIQKAMGTGIDVSFDCAGLNKTMSTALGATCAGGKVCLVGMGHH-EMTVPLTPAAVREVDVVGVFRY---------  312 (365)
Q Consensus       243 ~~i~~~~~~~~~~~d~vid~~g~~~~~~~~~~~l~~~G~~~~~g~~~~-~~~~~~~~~~~~~~~i~~~~~~---------  312 (365)
                      ..++...   ++++|++|||+|+. .....+++++++|+++.+|.... ...++....+.++.++.+....         
T Consensus       212 ~~i~~~~---~~~~d~vld~~g~~-~~~~~~~~l~~~G~~v~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  287 (341)
T cd08290         212 ELLKSAP---GGRPKLALNCVGGK-SATELARLLSPGGTMVTYGGMSGQPVTVPTSLLIFKDITLRGFWLTRWLKRANPE  287 (341)
T ss_pred             HHHHHHc---CCCceEEEECcCcH-hHHHHHHHhCCCCEEEEEeccCCCCcccCHHHHhhCCceEEEEecHHHHhhcCHH
Confidence            5555442   23899999999976 66778999999999999974322 2233443456788888876532         


Q ss_pred             --CCcHHHHHHHHHcCCCCCCCceEEEe---cCChhhHHHHHHHHhcCCCceEEEEeC
Q 017868          313 --KNTWPLCLELLRSGKIDVKPLVTHRF---GFSQKEVEEAFETSARGGTAIKVMFNL  365 (365)
Q Consensus       313 --~~~~~~~~~~l~~g~~~~~~~~~~~~---~~~~~~~~~a~~~~~~~~~~gk~vi~~  365 (365)
                        .+.+.++++++.++.+.  +...+.+   ++  +++.+|++.+.++...+|+|++.
T Consensus       288 ~~~~~~~~~~~~~~~~~l~--~~~~~~~~~~~~--~~~~~a~~~~~~~~~~~k~v~~~  341 (341)
T cd08290         288 EKEDMLEELAELIREGKLK--APPVEKVTDDPL--EEFKDALANALKGGGGGKQVLVM  341 (341)
T ss_pred             HHHHHHHHHHHHHHcCCcc--CCcccccccCCH--HHHHHHHHHHhhcCCCCeEEEeC
Confidence              12578899999999884  3344455   66  99999999999998999999863

2-enoyl thioester reductase (ETR) catalyzes the NADPH-dependent conversion of trans-2-enoyl acyl carrier protein/coenzyme A (ACP/CoA) to acyl-(ACP/CoA) in fatty acid synthesis. 2-enoyl thioester reductase activity has been linked in Candida tropicalis as essential in maintaining mitiochondrial respiratory function. This ETR family is a part of the medium chain dehydrogenase/reductase family, but lack the zinc coordination sites characteristic of the alcohol dehydrogenases in this family. NAD(P)(H)-dependent oxidoreductases are the major enzymes in the interconversion of alcohols and aldehydes, or ketones. Alcohol dehydrogenase in the liver converts ethanol and NAD+ to acetaldehyde and NADH, while in yeast and some other microorganisms ADH catalyzes the conversion acetaldehyde to ethanol in alcoholic fermentation. ADH is a member of the medium chain alcohol dehydrogenase family (MDR), which has a NAD(P)(H)-binding domain in a Rossmann f

>PTZ00354 alcohol dehydrogenase; Provisional

Probab=100.00  E-value=4.7e-34  Score=261.31  Aligned_cols=309  Identities=22%  Similarity=0.315  Sum_probs=245.0

Q ss_pred             cceeEEEecCC---ceEEEEecCCCCCCCcEEEEEeeeeeCcccHhhhhccccCCccCCCCcccCccceEEEEEeCCCCC
Q 017868           17 VNMAAWLLGVN---TLKIQPFELPSLGPYDVLVRMKAVGICGSDVHYLKTLRCADFVVKEPMVIGHECAGVIEKVGSEVK   93 (365)
Q Consensus        17 ~~~~~~~~~~~---~l~~~~~~~p~~~~~eVlI~v~~~~l~~~D~~~~~g~~~~~~~~~~p~~~G~e~~G~V~~vG~~v~   93 (365)
                      ||||+++...+   .+++.+.+.|.+.++||+|||.++++|+.|.....|....  ....|.++|+|++|+|+++|++++
T Consensus         1 ~m~a~~~~~~~~~~~~~~~~~~~~~~~~~~v~v~v~~~~i~~~d~~~~~~~~~~--~~~~~~~~g~e~~G~v~~vG~~v~   78 (334)
T PTZ00354          1 MMRAVTLKGFGGVDVLKIGESPKPAPKRNDVLIKVSAAGVNRADTLQRQGKYPP--PPGSSEILGLEVAGYVEDVGSDVK   78 (334)
T ss_pred             CcEEEEEEecCCCcceEEEeCCCCCCCCCEEEEEEEEEecCHHHHHHhCCCCCC--CCCCCcccceeeEEEEEEeCCCCC
Confidence            58899988654   6777888888899999999999999999998887764321  123456899999999999999999


Q ss_pred             CCCCCCEEEEcCCcCCCCCccccCCCCCCCCCccccccCCCCcceeeEEeecCCceEECCCCCCcchhccch-hhHHHHH
Q 017868           94 TLVPGDRVALEPGISCWRCDHCKGGRYNLCPEMKFFATPPVHGSLANQVVHPADLCFKLPDNVSLEEGAMCE-PLSVGLH  172 (365)
Q Consensus        94 ~~~~Gd~V~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~v~~~~~~~iP~~~~~~~a~~~~-~~~~a~~  172 (365)
                      ++++||+|+++.                            .+|+|++|++++.++++++|+++++.+++.+. ++.+|++
T Consensus        79 ~~~~Gd~V~~~~----------------------------~~g~~~~~~~v~~~~~~~ip~~~~~~~a~~~~~~~~ta~~  130 (334)
T PTZ00354         79 RFKEGDRVMALL----------------------------PGGGYAEYAVAHKGHVMHIPQGYTFEEAAAIPEAFLTAWQ  130 (334)
T ss_pred             CCCCCCEEEEec----------------------------CCCceeeEEEecHHHcEeCCCCCCHHHHHHHHHHHHHHHH
Confidence            999999998751                            24899999999999999999999998888765 7788999


Q ss_pred             HHH-hcCCCCCCEEEEEcC-CHHHHHHHHHHHHHCCCCeEEEEeCChhHHHHHHHcCCCEEEeCCCCcccHHHHHHHHHH
Q 017868          173 ACR-RANIGPETNVLIMGA-GPIGLVTMLGAPRAFGAPRIVIVDVDDYRLSVAKEIGADNIVKVSTNLQDIAEEVEKIQK  250 (365)
Q Consensus       173 ~~~-~~~~~~g~~vlI~G~-g~~G~~ai~~l~~~~g~~~vi~v~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~i~~~~~  250 (365)
                      ++. .+.+++|++|||+|+ |.+|+++++ +++..|++. +.+.+++++.+.++++|++.+++.... .++.+.+++.. 
T Consensus       131 ~l~~~~~~~~~~~vlI~ga~g~~g~~~~~-~a~~~g~~v-~~~~~~~~~~~~~~~~g~~~~~~~~~~-~~~~~~~~~~~-  206 (334)
T PTZ00354        131 LLKKHGDVKKGQSVLIHAGASGVGTAAAQ-LAEKYGAAT-IITTSSEEKVDFCKKLAAIILIRYPDE-EGFAPKVKKLT-  206 (334)
T ss_pred             HHHHhcCCCCCCEEEEEcCCchHHHHHHH-HHHHcCCEE-EEEeCCHHHHHHHHHcCCcEEEecCCh-hHHHHHHHHHh-
Confidence            985 478999999999986 999999999 999999964 457788899998899999877764321 12555565543 


Q ss_pred             HhCCCceEEEeCCCCHHHHHHHHHhcccCCEEEEEccCCC-Ccc-ccchHhhhcCcEEEeecccC-----------CcHH
Q 017868          251 AMGTGIDVSFDCAGLNKTMSTALGATCAGGKVCLVGMGHH-EMT-VPLTPAAVREVDVVGVFRYK-----------NTWP  317 (365)
Q Consensus       251 ~~~~~~d~vid~~g~~~~~~~~~~~l~~~G~~~~~g~~~~-~~~-~~~~~~~~~~~~i~~~~~~~-----------~~~~  317 (365)
                       .+.++|++||++|. ..+..++++++++|+++.++.... ... +....+..+..++.+.....           +.++
T Consensus       207 -~~~~~d~~i~~~~~-~~~~~~~~~l~~~g~~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  284 (334)
T PTZ00354        207 -GEKGVNLVLDCVGG-SYLSETAEVLAVDGKWIVYGFMGGAKVEKFNLLPLLRKRASIIFSTLRSRSDEYKADLVASFER  284 (334)
T ss_pred             -CCCCceEEEECCch-HHHHHHHHHhccCCeEEEEecCCCCcccccCHHHHHhhCCEEEeeeccccchhhhHHHHHHHHH
Confidence             25789999999986 488899999999999999875332 211 44444555666777754321           2346


Q ss_pred             HHHHHHHcCCCCCCCceEEEecCChhhHHHHHHHHhcCCCceEEEEeC
Q 017868          318 LCLELLRSGKIDVKPLVTHRFGFSQKEVEEAFETSARGGTAIKVMFNL  365 (365)
Q Consensus       318 ~~~~~l~~g~~~~~~~~~~~~~~~~~~~~~a~~~~~~~~~~gk~vi~~  365 (365)
                      +++++++++.+.  +.+.+.+++  +++.++++.+.++...+|+|+++
T Consensus       285 ~~~~~~~~~~l~--~~~~~~~~~--~~~~~~~~~~~~~~~~~kvvv~~  328 (334)
T PTZ00354        285 EVLPYMEEGEIK--PIVDRTYPL--EEVAEAHTFLEQNKNIGKVVLTV  328 (334)
T ss_pred             HHHHHHHCCCcc--CccccEEcH--HHHHHHHHHHHhCCCCceEEEec
Confidence            788999999884  446677888  99999999999888889999864

>cd08276 MDR7 Medium chain dehydrogenases/reductase (MDR)/zinc-dependent alcohol dehydrogenase-like family

Probab=100.00  E-value=1e-33  Score=259.33  Aligned_cols=329  Identities=27%  Similarity=0.371  Sum_probs=260.9

Q ss_pred             ceeEEEec---CCceEEEEecCCCCCCCcEEEEEeeeeeCcccHhhhhccccCCccCCCCcccCccceEEEEEeCCCCCC
Q 017868           18 NMAAWLLG---VNTLKIQPFELPSLGPYDVLVRMKAVGICGSDVHYLKTLRCADFVVKEPMVIGHECAGVIEKVGSEVKT   94 (365)
Q Consensus        18 ~~~~~~~~---~~~l~~~~~~~p~~~~~eVlI~v~~~~l~~~D~~~~~g~~~~~~~~~~p~~~G~e~~G~V~~vG~~v~~   94 (365)
                      |+++++..   .+.+++.+.+.|.+.++|++|++.++++|+.|+....|.....  ...|.++|||++|+|+.+|+++++
T Consensus         1 ~~a~~~~~~~~~~~~~~~~~~~~~~~~~~v~i~v~~~~i~~~d~~~~~g~~~~~--~~~~~~~g~e~~G~v~~~G~~~~~   78 (336)
T cd08276           1 MKAWRLSGGGGLDNLKLVEEPVPEPGPGEVLVRVHAVSLNYRDLLILNGRYPPP--VKDPLIPLSDGAGEVVAVGEGVTR   78 (336)
T ss_pred             CeEEEEeccCCCcceEEEeccCCCCCCCeEEEEEEEEecCHHHHHHhcCCCCCC--CCCCcccccceeEEEEEeCCCCcC
Confidence            57788773   3678888888888999999999999999999999887643222  235788999999999999999999


Q ss_pred             CCCCCEEEEcCCcCCCCCccccCCCCCCCCCccccccCCCCcceeeEEeecCCceEECCCCCCcchhccch-hhHHHHHH
Q 017868           95 LVPGDRVALEPGISCWRCDHCKGGRYNLCPEMKFFATPPVHGSLANQVVHPADLCFKLPDNVSLEEGAMCE-PLSVGLHA  173 (365)
Q Consensus        95 ~~~Gd~V~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~v~~~~~~~iP~~~~~~~a~~~~-~~~~a~~~  173 (365)
                      |++||+|++.....|+.+.+|.      |......+ ...+|+|++|+.++.+.++++|+++++.+++.+. .+.+|+++
T Consensus        79 ~~~Gd~V~~~~~~~~~~~~~~~------~~~~~~~~-~~~~g~~~~~~~~~~~~~~~lp~~~~~~~a~~~~~~~~~a~~~  151 (336)
T cd08276          79 FKVGDRVVPTFFPNWLDGPPTA------EDEASALG-GPIDGVLAEYVVLPEEGLVRAPDHLSFEEAATLPCAGLTAWNA  151 (336)
T ss_pred             CCCCCEEEEecccccccccccc------cccccccc-cccCceeeeEEEecHHHeEECCCCCCHHHhhhhhHHHHHHHHH
Confidence            9999999998766665554432      22221222 2347899999999999999999999998888776 77889988


Q ss_pred             HH-hcCCCCCCEEEEEcCCHHHHHHHHHHHHHCCCCeEEEEeCChhHHHHHHHcCCCEEEeCCCCcccHHHHHHHHHHHh
Q 017868          174 CR-RANIGPETNVLIMGAGPIGLVTMLGAPRAFGAPRIVIVDVDDYRLSVAKEIGADNIVKVSTNLQDIAEEVEKIQKAM  252 (365)
Q Consensus       174 ~~-~~~~~~g~~vlI~G~g~~G~~ai~~l~~~~g~~~vi~v~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~i~~~~~~~  252 (365)
                      +. .+.+++|++|+|+|+|++|+++++ +++..|++ ++.++.++++.+.++++|++.+++... ..++...++...  .
T Consensus       152 l~~~~~~~~g~~vli~g~g~~g~~~~~-~a~~~G~~-v~~~~~~~~~~~~~~~~g~~~~~~~~~-~~~~~~~~~~~~--~  226 (336)
T cd08276         152 LFGLGPLKPGDTVLVQGTGGVSLFALQ-FAKAAGAR-VIATSSSDEKLERAKALGADHVINYRT-TPDWGEEVLKLT--G  226 (336)
T ss_pred             HHhhcCCCCCCEEEEECCcHHHHHHHH-HHHHcCCE-EEEEeCCHHHHHHHHHcCCCEEEcCCc-ccCHHHHHHHHc--C
Confidence            74 578999999999988999999999 99999995 777778889999998899888776432 145666666553  2


Q ss_pred             CCCceEEEeCCCCHHHHHHHHHhcccCCEEEEEccCCCC-ccccchHhhhcCcEEEeeccc-CCcHHHHHHHHHcCCCCC
Q 017868          253 GTGIDVSFDCAGLNKTMSTALGATCAGGKVCLVGMGHHE-MTVPLTPAAVREVDVVGVFRY-KNTWPLCLELLRSGKIDV  330 (365)
Q Consensus       253 ~~~~d~vid~~g~~~~~~~~~~~l~~~G~~~~~g~~~~~-~~~~~~~~~~~~~~i~~~~~~-~~~~~~~~~~l~~g~~~~  330 (365)
                      +.++|+++|+++. .....++++++++|+++.+|..... ..........+++++.+.... ...+.+++++++++.+. 
T Consensus       227 ~~~~d~~i~~~~~-~~~~~~~~~l~~~G~~v~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~l~-  304 (336)
T cd08276         227 GRGVDHVVEVGGP-GTLAQSIKAVAPGGVISLIGFLSGFEAPVLLLPLLTKGATLRGIAVGSRAQFEAMNRAIEAHRIR-  304 (336)
T ss_pred             CCCCcEEEECCCh-HHHHHHHHhhcCCCEEEEEccCCCCccCcCHHHHhhcceEEEEEecCcHHHHHHHHHHHHcCCcc-
Confidence            5789999999985 4788999999999999999854332 223344556788888887643 56788899999988873 


Q ss_pred             CCceEEEecCChhhHHHHHHHHhcCCCceEEEEeC
Q 017868          331 KPLVTHRFGFSQKEVEEAFETSARGGTAIKVMFNL  365 (365)
Q Consensus       331 ~~~~~~~~~~~~~~~~~a~~~~~~~~~~gk~vi~~  365 (365)
                       +...+.|++  +++.++++.+.++...+|+++++
T Consensus       305 -~~~~~~~~~--~~~~~a~~~~~~~~~~~kvv~~~  336 (336)
T cd08276         305 -PVIDRVFPF--EEAKEAYRYLESGSHFGKVVIRV  336 (336)
T ss_pred             -cccCcEEeH--HHHHHHHHHHHhCCCCceEEEeC
Confidence             445577777  99999999999888889999874

This group is a member of the medium chain dehydrogenases/reductase (MDR)/zinc-dependent alcohol dehydrogenase-like family, but lacks the zinc-binding sites of the zinc-dependent alcohol dehydrogenases. The medium chain dehydrogenases/reductase (MDR)/zinc-dependent alcohol dehydrogenase-like family, which contains the zinc-dependent alcohol dehydrogenase (ADH-Zn) and related proteins, is a diverse group of proteins related to the first identified member, class I mammalian ADH. MDRs display a broad range of activities and are distinguished from the smaller short chain dehydrogenases (~ 250 amino acids vs. the ~ 350 amino acids of the MDR). The MDR proteins have 2 domains: a C-terminal NAD(P)-binding Rossmann fold domain of a beta-alpha form and an N-terminal catalytic domain with distant homology to GroES. The MDR group contains a host of activities, including the founding alcoh

>cd08270 MDR4 Medium chain dehydrogenases/reductase (MDR)/zinc-dependent alcohol dehydrogenase-like family

Probab=100.00  E-value=7.2e-34  Score=256.83  Aligned_cols=293  Identities=24%  Similarity=0.302  Sum_probs=237.2

Q ss_pred             ceeEEEec--CCceEEEEecCCCCCCCcEEEEEeeeeeCcccHhhhhccccCCccCCCCcccCccceEEEEEeCCCCCCC
Q 017868           18 NMAAWLLG--VNTLKIQPFELPSLGPYDVLVRMKAVGICGSDVHYLKTLRCADFVVKEPMVIGHECAGVIEKVGSEVKTL   95 (365)
Q Consensus        18 ~~~~~~~~--~~~l~~~~~~~p~~~~~eVlI~v~~~~l~~~D~~~~~g~~~~~~~~~~p~~~G~e~~G~V~~vG~~v~~~   95 (365)
                      |+++++.+  +..+++.+.+.|.+.++||+||+.++++|+.|+....+       ...|.++|+|++|+|+++|++++.|
T Consensus         1 ~~~~~~~~~~~~~~~~~~~~~p~~~~~ev~v~v~~~~i~~~d~~~~~~-------~~~~~~~g~e~~G~v~~~G~~v~~~   73 (305)
T cd08270           1 MRALVVDPDAPLRLRLGEVPDPQPAPHEALVRVAAISLNRGELKFAAE-------RPDGAVPGWDAAGVVERAAADGSGP   73 (305)
T ss_pred             CeEEEEccCCCceeEEEecCCCCCCCCEEEEEEEEEecCHHHHHhhcc-------CCCCCcccceeEEEEEEeCCCCCCC
Confidence            46666665  45788889999999999999999999999999876542       1236689999999999999999999


Q ss_pred             CCCCEEEEcCCcCCCCCccccCCCCCCCCCccccccCCCCcceeeEEeecCCceEECCCCCCcchhccch-hhHHHHHHH
Q 017868           96 VPGDRVALEPGISCWRCDHCKGGRYNLCPEMKFFATPPVHGSLANQVVHPADLCFKLPDNVSLEEGAMCE-PLSVGLHAC  174 (365)
Q Consensus        96 ~~Gd~V~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~v~~~~~~~iP~~~~~~~a~~~~-~~~~a~~~~  174 (365)
                      ++||+|+++.                            ..|+|++|+.++.++++++|+++++++++.++ .+.+||+++
T Consensus        74 ~~Gd~V~~~~----------------------------~~g~~~~~~~v~~~~~~~ip~~~~~~~a~~~~~~~~ta~~~~  125 (305)
T cd08270          74 AVGARVVGLG----------------------------AMGAWAELVAVPTGWLAVLPDGVSFAQAATLPVAGVTALRAL  125 (305)
T ss_pred             CCCCEEEEec----------------------------CCcceeeEEEEchHHeEECCCCCCHHHHHHhHhHHHHHHHHH
Confidence            9999998751                            25899999999999999999999999988886 778999998


Q ss_pred             HhcCCCCCCEEEEEcC-CHHHHHHHHHHHHHCCCCeEEEEeCChhHHHHHHHcCCCEEEeCCCCcccHHHHHHHHHHHhC
Q 017868          175 RRANIGPETNVLIMGA-GPIGLVTMLGAPRAFGAPRIVIVDVDDYRLSVAKEIGADNIVKVSTNLQDIAEEVEKIQKAMG  253 (365)
Q Consensus       175 ~~~~~~~g~~vlI~G~-g~~G~~ai~~l~~~~g~~~vi~v~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~i~~~~~~~~  253 (365)
                      ......+|++|+|+|+ |++|+++++ +++..|+ .++.+++++++.+.++++|++..+....   +       +   .+
T Consensus       126 ~~~~~~~~~~vli~g~~~~~g~~~~~-~a~~~g~-~v~~~~~~~~~~~~~~~~g~~~~~~~~~---~-------~---~~  190 (305)
T cd08270         126 RRGGPLLGRRVLVTGASGGVGRFAVQ-LAALAGA-HVVAVVGSPARAEGLRELGAAEVVVGGS---E-------L---SG  190 (305)
T ss_pred             HHhCCCCCCEEEEECCCcHHHHHHHH-HHHHcCC-EEEEEeCCHHHHHHHHHcCCcEEEeccc---c-------c---cC
Confidence            6544446999999987 999999999 9999999 5788888899999999999875543211   1       1   13


Q ss_pred             CCceEEEeCCCCHHHHHHHHHhcccCCEEEEEccCCCC-ccccchHhhh--cCcEEEeeccc-----CCcHHHHHHHHHc
Q 017868          254 TGIDVSFDCAGLNKTMSTALGATCAGGKVCLVGMGHHE-MTVPLTPAAV--REVDVVGVFRY-----KNTWPLCLELLRS  325 (365)
Q Consensus       254 ~~~d~vid~~g~~~~~~~~~~~l~~~G~~~~~g~~~~~-~~~~~~~~~~--~~~~i~~~~~~-----~~~~~~~~~~l~~  325 (365)
                      +++|+++|++|.. .+...+++++.+|+++.+|..... ...+...+..  ++.++.+....     .+.+..+++++++
T Consensus       191 ~~~d~vl~~~g~~-~~~~~~~~l~~~G~~v~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  269 (305)
T cd08270         191 APVDLVVDSVGGP-QLARALELLAPGGTVVSVGSSSGEPAVFNPAAFVGGGGGRRLYTFFLYDGEPLAADLARLLGLVAA  269 (305)
T ss_pred             CCceEEEECCCcH-HHHHHHHHhcCCCEEEEEeccCCCcccccHHHHhcccccceEEEEEccCHHHHHHHHHHHHHHHHC
Confidence            5799999999975 788999999999999999854321 2233333333  57777776543     3567889999999


Q ss_pred             CCCCCCCceEEEecCChhhHHHHHHHHhcCCCceEEEEeC
Q 017868          326 GKIDVKPLVTHRFGFSQKEVEEAFETSARGGTAIKVMFNL  365 (365)
Q Consensus       326 g~~~~~~~~~~~~~~~~~~~~~a~~~~~~~~~~gk~vi~~  365 (365)
                      +++.  +.+.+++++  +++++|++.+.++...||+|+++
T Consensus       270 ~~i~--~~~~~~~~~--~~~~~a~~~~~~~~~~gkvvi~~  305 (305)
T cd08270         270 GRLD--PRIGWRGSW--TEIDEAAEALLARRFRGKAVLDV  305 (305)
T ss_pred             CCcc--ceeccEEcH--HHHHHHHHHHHcCCCCceEEEeC
Confidence            9994  446678888  99999999999999999999875

This group is a member of the medium chain dehydrogenases/reductase (MDR)/zinc-dependent alcohol dehydrogenase-like family, but lacks the zinc-binding sites of the zinc-dependent alcohol dehydrogenases. The medium chain dehydrogenases/reductase (MDR)/zinc-dependent alcohol dehydrogenase-like family, which contains the zinc-dependent alcohol dehydrogenase (ADH-Zn) and related proteins, is a diverse group of proteins related to the first identified member, class I mammalian ADH. MDRs display a broad range of activities and are distinguished from the smaller short chain dehydrogenases (~ 250 amino acids vs. the ~ 350 amino acids of the MDR). The MDR proteins have 2 domains: a C-terminal NAD(P)-binding Rossmann fold domain of a beta-alpha form and an N-terminal catalytic domain with distant homology to GroES. The MDR group contains a host of activities, including the founding alcoh

>PRK10754 quinone oxidoreductase, NADPH-dependent; Provisional

Probab=100.00  E-value=4.5e-34  Score=260.71  Aligned_cols=309  Identities=25%  Similarity=0.277  Sum_probs=241.9

Q ss_pred             cceeEEEecC---CceEEEEecCCCCCCCcEEEEEeeeeeCcccHhhhhccccCCccCCCCcccCccceEEEEEeCCCCC
Q 017868           17 VNMAAWLLGV---NTLKIQPFELPSLGPYDVLVRMKAVGICGSDVHYLKTLRCADFVVKEPMVIGHECAGVIEKVGSEVK   93 (365)
Q Consensus        17 ~~~~~~~~~~---~~l~~~~~~~p~~~~~eVlI~v~~~~l~~~D~~~~~g~~~~~~~~~~p~~~G~e~~G~V~~vG~~v~   93 (365)
                      +|+++.+.++   ..+++.+++.|.+.++||+|||.++++|+.|+....|....   ...|.++|+|++|+|+.+|++++
T Consensus         1 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ev~i~v~~~gi~~~d~~~~~g~~~~---~~~~~~~g~e~~G~v~~vG~~v~   77 (327)
T PRK10754          1 MAKRIEFHKHGGPEVLQAVEFTPADPAENEVQVENKAIGINYIDTYIRSGLYPP---PSLPSGLGTEAAGVVSKVGSGVK   77 (327)
T ss_pred             CceEEEEeccCChhHeEEeeccCCCCCCCEEEEEEEEEEcCHHHhhhcCCCCCC---CCCCCccCcceEEEEEEeCCCCC
Confidence            4677777643   58999999999999999999999999999999887664321   23477899999999999999999


Q ss_pred             CCCCCCEEEEcCCcCCCCCccccCCCCCCCCCccccccCCCCcceeeEEeecCCceEECCCCCCcchhccch-hhHHHHH
Q 017868           94 TLVPGDRVALEPGISCWRCDHCKGGRYNLCPEMKFFATPPVHGSLANQVVHPADLCFKLPDNVSLEEGAMCE-PLSVGLH  172 (365)
Q Consensus        94 ~~~~Gd~V~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~v~~~~~~~iP~~~~~~~a~~~~-~~~~a~~  172 (365)
                      .+++||+|+...                           ...|+|++|+.++.+.++++|+++++++++.++ .+.+|+.
T Consensus        78 ~~~~Gd~V~~~~---------------------------~~~g~~~~~v~v~~~~~~~lp~~~~~~~~~~~~~~~~ta~~  130 (327)
T PRK10754         78 HIKVGDRVVYAQ---------------------------SALGAYSSVHNVPADKAAILPDAISFEQAAASFLKGLTVYY  130 (327)
T ss_pred             CCCCCCEEEECC---------------------------CCCcceeeEEEcCHHHceeCCCCCCHHHHHHHHHHHHHHHH
Confidence            999999997531                           134899999999999999999999999888765 6778888


Q ss_pred             HHH-hcCCCCCCEEEEEcC-CHHHHHHHHHHHHHCCCCeEEEEeCChhHHHHHHHcCCCEEEeCCCCcccHHHHHHHHHH
Q 017868          173 ACR-RANIGPETNVLIMGA-GPIGLVTMLGAPRAFGAPRIVIVDVDDYRLSVAKEIGADNIVKVSTNLQDIAEEVEKIQK  250 (365)
Q Consensus       173 ~~~-~~~~~~g~~vlI~G~-g~~G~~ai~~l~~~~g~~~vi~v~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~i~~~~~  250 (365)
                      ++. .+++++|++|+|+|+ |.+|+++++ +++..|++ +++++.++++.++++++|++.+++.  ...++.+.+++.+.
T Consensus       131 ~l~~~~~~~~g~~vlI~g~~g~ig~~~~~-lak~~G~~-v~~~~~~~~~~~~~~~~g~~~~~~~--~~~~~~~~~~~~~~  206 (327)
T PRK10754        131 LLRKTYEIKPDEQFLFHAAAGGVGLIACQ-WAKALGAK-LIGTVGSAQKAQRAKKAGAWQVINY--REENIVERVKEITG  206 (327)
T ss_pred             HHHhhcCCCCCCEEEEEeCCcHHHHHHHH-HHHHcCCE-EEEEeCCHHHHHHHHHCCCCEEEcC--CCCcHHHHHHHHcC
Confidence            874 578999999999975 999999999 99999995 7777788999999999999887764  33566666666543


Q ss_pred             HhCCCceEEEeCCCCHHHHHHHHHhcccCCEEEEEccCCCC-ccccchHhhhcC------cEEEeeccc----CCcHHHH
Q 017868          251 AMGTGIDVSFDCAGLNKTMSTALGATCAGGKVCLVGMGHHE-MTVPLTPAAVRE------VDVVGVFRY----KNTWPLC  319 (365)
Q Consensus       251 ~~~~~~d~vid~~g~~~~~~~~~~~l~~~G~~~~~g~~~~~-~~~~~~~~~~~~------~~i~~~~~~----~~~~~~~  319 (365)
                        +.++|++|||+|. ......+++++++|+++.+|..... .......+..++      ..+.+....    .+.+.++
T Consensus       207 --~~~~d~vl~~~~~-~~~~~~~~~l~~~g~~v~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  283 (327)
T PRK10754        207 --GKKVRVVYDSVGK-DTWEASLDCLQRRGLMVSFGNASGPVTGVNLGILNQKGSLYVTRPSLQGYITTREELTEASNEL  283 (327)
T ss_pred             --CCCeEEEEECCcH-HHHHHHHHHhccCCEEEEEccCCCCCCCcCHHHHhccCceEEecceeecccCCHHHHHHHHHHH
Confidence              6789999999996 4778899999999999999854322 112222222111      112121111    2235568


Q ss_pred             HHHHHcCCCCCCCceEEEecCChhhHHHHHHHHhcCCCceEEEEe
Q 017868          320 LELLRSGKIDVKPLVTHRFGFSQKEVEEAFETSARGGTAIKVMFN  364 (365)
Q Consensus       320 ~~~l~~g~~~~~~~~~~~~~~~~~~~~~a~~~~~~~~~~gk~vi~  364 (365)
                      ++++.++.+.+.....+.|++  +++.++++.+.++...+|+|+.
T Consensus       284 ~~~l~~g~l~~~~~~~~~~~~--~~~~~a~~~~~~~~~~~~~~~~  326 (327)
T PRK10754        284 FSLIASGVIKVDVAEQQKFPL--KDAQRAHEILESRATQGSSLLI  326 (327)
T ss_pred             HHHHHCCCeeeecccCcEEcH--HHHHHHHHHHHcCCCcceEEEe
Confidence            899999998544445677888  9999999999999999999986

>KOG1198 consensus Zinc-binding oxidoreductase [Energy production and conversion; General function prediction only]

Probab=100.00  E-value=1e-34  Score=261.29  Aligned_cols=299  Identities=26%  Similarity=0.409  Sum_probs=226.2

Q ss_pred             CceEEEEecCCCCCCCcEEEEEeeeeeCcccHhhhhccccCCc-cCCCCcccCccceEE---EEEeC-CCCCCCCCCCEE
Q 017868           27 NTLKIQPFELPSLGPYDVLVRMKAVGICGSDVHYLKTLRCADF-VVKEPMVIGHECAGV---IEKVG-SEVKTLVPGDRV  101 (365)
Q Consensus        27 ~~l~~~~~~~p~~~~~eVlI~v~~~~l~~~D~~~~~g~~~~~~-~~~~p~~~G~e~~G~---V~~vG-~~v~~~~~Gd~V  101 (365)
                      ......+.++|.|++++++|++.++++||.|+.+..|...... ...+|.+.+.++.|+   +...| ..+..+..||++
T Consensus        18 ~~~~~~~~~iP~~~~~~~~i~~~a~a~NpiD~~~~~g~~~~~~~~~~~p~ii~~~g~~~~~~~~~~g~~~~~~~~~g~~~   97 (347)
T KOG1198|consen   18 EVLFSEEVPIPEPEDGEVLIKVVAVALNPIDLKIRNGYYSPIPLGREFPGIIGRDGSGVVGAVESVGDDVVGGWVHGDAV   97 (347)
T ss_pred             ceEEeecccCCCCCCCceEEEEEEeccChHHHHHHccCcCCCCCccCCCCccccccCCceeEEeccccccccceEeeeEE
Confidence            4555578999999999999999999999999999988654332 125665555544444   44455 334446666655


Q ss_pred             EEcCCcCCCCCccccCCCCCCCCCccccccCCCCcceeeEEeecCCceEECCCCCCcchhccch-hhHHHHHHHH-hc--
Q 017868          102 ALEPGISCWRCDHCKGGRYNLCPEMKFFATPPVHGSLANQVVHPADLCFKLPDNVSLEEGAMCE-PLSVGLHACR-RA--  177 (365)
Q Consensus       102 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~v~~~~~~~iP~~~~~~~a~~~~-~~~~a~~~~~-~~--  177 (365)
                      ...                            ...|+|+||+++++..++++|+++++++|+.++ .+.|||.++. ..  
T Consensus        98 ~~~----------------------------~~~g~~aey~v~p~~~~~~~P~~l~~~~aa~~p~~~~tA~~al~~~~~~  149 (347)
T KOG1198|consen   98 VAF----------------------------LSSGGLAEYVVVPEKLLVKIPESLSFEEAAALPLAALTALSALFQLAPG  149 (347)
T ss_pred             eec----------------------------cCCCceeeEEEcchhhccCCCCccChhhhhcCchHHHHHHHHHHhcccc
Confidence            442                            356999999999999999999999999999998 8889999984 56  


Q ss_pred             ----CCCCCCEEEEEcC-CHHHHHHHHHHHHHCCCCeEEEEeCChhHHHHHHHcCCCEEEeCCCCcccHHHHHHHHHHHh
Q 017868          178 ----NIGPETNVLIMGA-GPIGLVTMLGAPRAFGAPRIVIVDVDDYRLSVAKEIGADNIVKVSTNLQDIAEEVEKIQKAM  252 (365)
Q Consensus       178 ----~~~~g~~vlI~G~-g~~G~~ai~~l~~~~g~~~vi~v~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~i~~~~~~~  252 (365)
                          ++++|++|||+|+ |++|++++| +|+..++. .+++.+++++.++++++|++.+++|+.  +++.+.++..+   
T Consensus       150 ~~~~~~~~g~~vLv~ggsggVG~~aiQ-lAk~~~~~-~v~t~~s~e~~~l~k~lGAd~vvdy~~--~~~~e~~kk~~---  222 (347)
T KOG1198|consen  150 KRSKKLSKGKSVLVLGGSGGVGTAAIQ-LAKHAGAI-KVVTACSKEKLELVKKLGADEVVDYKD--ENVVELIKKYT---  222 (347)
T ss_pred             ccccccCCCCeEEEEeCCcHHHHHHHH-HHHhcCCc-EEEEEcccchHHHHHHcCCcEeecCCC--HHHHHHHHhhc---
Confidence                7999999999976 899999999 99999964 455568999999999999999999865  67777766543   


Q ss_pred             CCCceEEEeCCCCHHHHHHHHHhcccCCEEEEEccCC---CCcccc-----chHhh-----hcCcEEEeec--ccCCcHH
Q 017868          253 GTGIDVSFDCAGLNKTMSTALGATCAGGKVCLVGMGH---HEMTVP-----LTPAA-----VREVDVVGVF--RYKNTWP  317 (365)
Q Consensus       253 ~~~~d~vid~~g~~~~~~~~~~~l~~~G~~~~~g~~~---~~~~~~-----~~~~~-----~~~~~i~~~~--~~~~~~~  317 (365)
                      +.++|+||||+|+. .......++...|+...++...   .+...+     ...+.     .+........  ...+.++
T Consensus       223 ~~~~DvVlD~vg~~-~~~~~~~~l~~~g~~~~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~  301 (347)
T KOG1198|consen  223 GKGVDVVLDCVGGS-TLTKSLSCLLKGGGGAYIGLVGDELANYKLDDLWQSANGIKLYSLGLKGVNYRWLYFVPSAEYLK  301 (347)
T ss_pred             CCCccEEEECCCCC-ccccchhhhccCCceEEEEeccccccccccccchhhhhhhhheeeeeeccceeeeeecCCHHHHH
Confidence            68999999999986 6677778888887654443221   111111     00000     1111111111  1156788


Q ss_pred             HHHHHHHcCCCCCCCceEEEecCChhhHHHHHHHHhcCCCceEEEEeC
Q 017868          318 LCLELLRSGKIDVKPLVTHRFGFSQKEVEEAFETSARGGTAIKVMFNL  365 (365)
Q Consensus       318 ~~~~~l~~g~~~~~~~~~~~~~~~~~~~~~a~~~~~~~~~~gk~vi~~  365 (365)
                      .+.++++.+++  +|.+.+.|++  +++.+|++.+.++...||+++.+
T Consensus       302 ~l~~~ie~gki--kp~i~~~~p~--~~~~ea~~~~~~~~~~GK~vl~~  345 (347)
T KOG1198|consen  302 ALVELIEKGKI--KPVIDSVYPF--SQAKEAFEKLEKSHATGKVVLEK  345 (347)
T ss_pred             HHHHHHHcCcc--cCCcceeeeH--HHHHHHHHHHhhcCCcceEEEEe
Confidence            99999999977  8999999999  99999999999999999999863

>COG2130 Putative NADP-dependent oxidoreductases [General function prediction only]

Probab=100.00  E-value=9.2e-34  Score=239.06  Aligned_cols=294  Identities=18%  Similarity=0.189  Sum_probs=234.8

Q ss_pred             cCCceEEEEecCCCCCCCcEEEEEeeeeeCcccHhhhhccccCCccCCCCcccCccceEEEEEeC--CCCCCCCCCCEEE
Q 017868           25 GVNTLKIQPFELPSLGPYDVLVRMKAVGICGSDVHYLKTLRCADFVVKEPMVIGHECAGVIEKVG--SEVKTLVPGDRVA  102 (365)
Q Consensus        25 ~~~~l~~~~~~~p~~~~~eVlI~v~~~~l~~~D~~~~~g~~~~~~~~~~p~~~G~e~~G~V~~vG--~~v~~~~~Gd~V~  102 (365)
                      ..++++++++++|+|+++|||+|..|.+++|.    +.|.+........|+-+|-..+|-++...  ++..+|++||.|+
T Consensus        23 ~~d~F~lee~~vp~p~~GqvLl~~~ylS~DPy----mRgrm~d~~SY~~P~~lG~~~~gg~V~~Vv~S~~~~f~~GD~V~   98 (340)
T COG2130          23 VPDDFRLEEVDVPEPGEGQVLLRTLYLSLDPY----MRGRMSDAPSYAPPVELGEVMVGGTVAKVVASNHPGFQPGDIVV   98 (340)
T ss_pred             CCCCceeEeccCCCCCcCceEEEEEEeccCHH----HeecccCCcccCCCcCCCceeECCeeEEEEecCCCCCCCCCEEE
Confidence            34689999999999999999999999999993    33433222234557777766655444322  6678899999998


Q ss_pred             EcCCcCCCCCccccCCCCCCCCCccccccCCCCcceeeEEeecCCceEECCCCC---CcchhccchhhHHHHHHH-HhcC
Q 017868          103 LEPGISCWRCDHCKGGRYNLCPEMKFFATPPVHGSLANQVVHPADLCFKLPDNV---SLEEGAMCEPLSVGLHAC-RRAN  178 (365)
Q Consensus       103 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~v~~~~~~~iP~~~---~~~~a~~~~~~~~a~~~~-~~~~  178 (365)
                      ..                               .+|+||..++.+.+.+++++.   ++....+-++..|||.++ +.++
T Consensus        99 ~~-------------------------------~GWq~y~i~~~~~l~Kvd~~~~pl~~~LgvLGmpG~TAY~gLl~igq  147 (340)
T COG2130          99 GV-------------------------------SGWQEYAISDGEGLRKLDPSPAPLSAYLGVLGMPGLTAYFGLLDIGQ  147 (340)
T ss_pred             ec-------------------------------ccceEEEeechhhceecCCCCCCcchHHhhcCCchHHHHHHHHHhcC
Confidence            75                               689999999999999998653   333333446899999998 6799


Q ss_pred             CCCCCEEEEEcC-CHHHHHHHHHHHHHCCCCeEEEEeCChhHHHHHHH-cCCCEEEeCCCCcccHHHHHHHHHHHhCCCc
Q 017868          179 IGPETNVLIMGA-GPIGLVTMLGAPRAFGAPRIVIVDVDDYRLSVAKE-IGADNIVKVSTNLQDIAEEVEKIQKAMGTGI  256 (365)
Q Consensus       179 ~~~g~~vlI~G~-g~~G~~ai~~l~~~~g~~~vi~v~~~~~~~~~~~~-~g~~~~~~~~~~~~~~~~~i~~~~~~~~~~~  256 (365)
                      .++|++|+|.+| |++|..+.| +|+..|+ +|+++..+++|.+++++ +|.+.+++|..  +++.+.+++.   ++.++
T Consensus       148 pk~GetvvVSaAaGaVGsvvgQ-iAKlkG~-rVVGiaGg~eK~~~l~~~lGfD~~idyk~--~d~~~~L~~a---~P~GI  220 (340)
T COG2130         148 PKAGETVVVSAAAGAVGSVVGQ-IAKLKGC-RVVGIAGGAEKCDFLTEELGFDAGIDYKA--EDFAQALKEA---CPKGI  220 (340)
T ss_pred             CCCCCEEEEEecccccchHHHH-HHHhhCC-eEEEecCCHHHHHHHHHhcCCceeeecCc--ccHHHHHHHH---CCCCe
Confidence            999999999986 999999999 9999999 79999999999999987 99999999855  5887777664   58999


Q ss_pred             eEEEeCCCCHHHHHHHHHhcccCCEEEEEccC---CCC-c---cccchHhhhcCcEEEeeccc-------CCcHHHHHHH
Q 017868          257 DVSFDCAGLNKTMSTALGATCAGGKVCLVGMG---HHE-M---TVPLTPAAVREVDVVGVFRY-------KNTWPLCLEL  322 (365)
Q Consensus       257 d~vid~~g~~~~~~~~~~~l~~~G~~~~~g~~---~~~-~---~~~~~~~~~~~~~i~~~~~~-------~~~~~~~~~~  322 (365)
                      |+.||++|++ .++..+..|+..+++..+|.-   +.+ .   ...+..++.+++++.|+...       .+..+++..|
T Consensus       221 DvyfeNVGg~-v~DAv~~~ln~~aRi~~CG~IS~YN~~~~~~gp~~l~~l~~kr~~v~Gfiv~~~~~~~~~e~~~~l~~w  299 (340)
T COG2130         221 DVYFENVGGE-VLDAVLPLLNLFARIPVCGAISQYNAPELPPGPRRLPLLMAKRLRVQGFIVASDYDQRFPEALRELGGW  299 (340)
T ss_pred             EEEEEcCCch-HHHHHHHhhccccceeeeeehhhcCCCCCCCCcchhhHHHhhhheeEEEEechhhhhhhHHHHHHHHHH
Confidence            9999999986 999999999999999999832   111 1   11222356778999998752       3557889999


Q ss_pred             HHcCCCCCCCceEEEecCChhhHHHHHHHHhcCCCceEEEEeC
Q 017868          323 LRSGKIDVKPLVTHRFGFSQKEVEEAFETSARGGTAIKVMFNL  365 (365)
Q Consensus       323 l~~g~~~~~~~~~~~~~~~~~~~~~a~~~~~~~~~~gk~vi~~  365 (365)
                      +.+|++..+.  +-+-.|  |++.+||.-+.+++.+||+|+.+
T Consensus       300 v~~GKi~~~e--ti~dGl--EnaP~Af~gLl~G~N~GK~vvKv  338 (340)
T COG2130         300 VKEGKIQYRE--TIVDGL--ENAPEAFIGLLSGKNFGKLVVKV  338 (340)
T ss_pred             HHcCceeeEe--eehhhh--hccHHHHHHHhcCCccceEEEEe
Confidence            9999995544  333457  99999999999999999999874

>cd08250 Mgc45594_like Mgc45594 gene product and other MDR family members

Probab=100.00  E-value=3.5e-33  Score=255.06  Aligned_cols=305  Identities=22%  Similarity=0.272  Sum_probs=239.0

Q ss_pred             ceeEEEecC-----CceEEEEecCCCCCCCcEEEEEeeeeeCcccHhhhhccccCCccCCCCcccCccceEEEEEeCCCC
Q 017868           18 NMAAWLLGV-----NTLKIQPFELPSLGPYDVLVRMKAVGICGSDVHYLKTLRCADFVVKEPMVIGHECAGVIEKVGSEV   92 (365)
Q Consensus        18 ~~~~~~~~~-----~~l~~~~~~~p~~~~~eVlI~v~~~~l~~~D~~~~~g~~~~~~~~~~p~~~G~e~~G~V~~vG~~v   92 (365)
                      |+++++.++     +.+++++++.|.+.++||+|||.++++|+.|+....|.....  ..+|.++|+|++|+|+.+|+++
T Consensus         2 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ev~i~v~~~gi~~~d~~~~~g~~~~~--~~~p~~~g~e~~G~v~~vG~~v   79 (329)
T cd08250           2 FRKLVVHRLSPNFREATSIVDVPVPLPGPGEVLVKNRFVGINASDINFTAGRYDPG--VKPPFDCGFEGVGEVVAVGEGV   79 (329)
T ss_pred             ceEEEeccCCCCcccCceEEecCCCCCCCCEEEEEEEEEecCHHHHHHHhCCCCCC--CCCCcccCceeEEEEEEECCCC
Confidence            677777743     468899999999999999999999999999999877643211  3568899999999999999999


Q ss_pred             CCCCCCCEEEEcCCcCCCCCccccCCCCCCCCCccccccCCCCcceeeEEeecCCceEECCCCCCcchhccchhhHHHHH
Q 017868           93 KTLVPGDRVALEPGISCWRCDHCKGGRYNLCPEMKFFATPPVHGSLANQVVHPADLCFKLPDNVSLEEGAMCEPLSVGLH  172 (365)
Q Consensus        93 ~~~~~Gd~V~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~v~~~~~~~iP~~~~~~~a~~~~~~~~a~~  172 (365)
                      +++++||+|++.                             ..|+|++|+.++.+.++++|++. .+.++....+.+||+
T Consensus        80 ~~~~~Gd~V~~~-----------------------------~~g~~~s~~~v~~~~~~~ip~~~-~~~a~l~~~~~ta~~  129 (329)
T cd08250          80 TDFKVGDAVATM-----------------------------SFGAFAEYQVVPARHAVPVPELK-PEVLPLLVSGLTASI  129 (329)
T ss_pred             CCCCCCCEEEEe-----------------------------cCcceeEEEEechHHeEECCCCc-chhhhcccHHHHHHH
Confidence            999999999875                             24899999999999999999973 233333448889999


Q ss_pred             HHH-hcCCCCCCEEEEEcC-CHHHHHHHHHHHHHCCCCeEEEEeCChhHHHHHHHcCCCEEEeCCCCcccHHHHHHHHHH
Q 017868          173 ACR-RANIGPETNVLIMGA-GPIGLVTMLGAPRAFGAPRIVIVDVDDYRLSVAKEIGADNIVKVSTNLQDIAEEVEKIQK  250 (365)
Q Consensus       173 ~~~-~~~~~~g~~vlI~G~-g~~G~~ai~~l~~~~g~~~vi~v~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~i~~~~~  250 (365)
                      ++. ..++++|+++||+|+ |.+|+++++ +++..|++ ++++.+++++.+.++++|++.+++...  .++.+.+...  
T Consensus       130 ~l~~~~~~~~~~~vlI~ga~g~ig~~~~~-~a~~~g~~-v~~~~~~~~~~~~~~~~g~~~v~~~~~--~~~~~~~~~~--  203 (329)
T cd08250         130 ALEEVGEMKSGETVLVTAAAGGTGQFAVQ-LAKLAGCH-VIGTCSSDEKAEFLKSLGCDRPINYKT--EDLGEVLKKE--  203 (329)
T ss_pred             HHHHhcCCCCCCEEEEEeCccHHHHHHHH-HHHHcCCe-EEEEeCcHHHHHHHHHcCCceEEeCCC--ccHHHHHHHh--
Confidence            984 578999999999986 999999999 99999995 677778888889889999877765432  4555555443  


Q ss_pred             HhCCCceEEEeCCCCHHHHHHHHHhcccCCEEEEEccCCCCc----------cccchHhhhcCcEEEeeccc------CC
Q 017868          251 AMGTGIDVSFDCAGLNKTMSTALGATCAGGKVCLVGMGHHEM----------TVPLTPAAVREVDVVGVFRY------KN  314 (365)
Q Consensus       251 ~~~~~~d~vid~~g~~~~~~~~~~~l~~~G~~~~~g~~~~~~----------~~~~~~~~~~~~~i~~~~~~------~~  314 (365)
                       .+.++|++||++|. ..+...+++++++|+++.+|......          .........++.++.++...      .+
T Consensus       204 -~~~~vd~v~~~~g~-~~~~~~~~~l~~~g~~v~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  281 (329)
T cd08250         204 -YPKGVDVVYESVGG-EMFDTCVDNLALKGRLIVIGFISGYQSGTGPSPVKGATLPPKLLAKSASVRGFFLPHYAKLIPQ  281 (329)
T ss_pred             -cCCCCeEEEECCcH-HHHHHHHHHhccCCeEEEEecccCCcccCcccccccccccHHHhhcCceEEEEEhHHHHHHHHH
Confidence             25689999999996 57889999999999999997543210          01112345567777776432      34


Q ss_pred             cHHHHHHHHHcCCCCCCCceEEEecCChhhHHHHHHHHhcCCCceEEEEe
Q 017868          315 TWPLCLELLRSGKIDVKPLVTHRFGFSQKEVEEAFETSARGGTAIKVMFN  364 (365)
Q Consensus       315 ~~~~~~~~l~~g~~~~~~~~~~~~~~~~~~~~~a~~~~~~~~~~gk~vi~  364 (365)
                      .+.+++++++++.+.......+.+++  +++++|++.+.++...+|++++
T Consensus       282 ~~~~~~~~~~~~~l~~~~~~~~~~~~--~~~~~a~~~~~~~~~~~kvvv~  329 (329)
T cd08250         282 HLDRLLQLYQRGKLVCEVDPTRFRGL--ESVADAVDYLYSGKNIGKVVVE  329 (329)
T ss_pred             HHHHHHHHHHCCCeeeeECCccccCH--HHHHHHHHHHHcCCCCceEEeC
Confidence            57788999999988543334455677  9999999999998888999874

Includes Human Mgc45594 gene product of undetermined function. The medium chain dehydrogenases/reductase (MDR)/zinc-dependent alcohol dehydrogenase-like family, which contains the zinc-dependent alcohol dehydrogenase (ADH-Zn) and related proteins, is a diverse group of proteins related to the first identified member, class I mammalian ADH. MDRs display a broad range of activities and are distinguished from the smaller short chain dehydrogenases (~ 250 amino acids vs. the ~ 350 amino acids of the MDR). The MDR proteins have 2 domains: a C-terminal NAD(P) binding-Rossmann fold domain of a beta-alpha form and an N-terminal catalytic domain with distant homology to GroES.

>cd08249 enoyl_reductase_like enoyl_reductase_like

Probab=100.00  E-value=8.6e-34  Score=259.94  Aligned_cols=313  Identities=26%  Similarity=0.324  Sum_probs=240.4

Q ss_pred             ceeEEEecC--CceEEEEecCCCCCCCcEEEEEeeeeeCcccHhhhhccccCCccCCCCcccCccceEEEEEeCCCCCCC
Q 017868           18 NMAAWLLGV--NTLKIQPFELPSLGPYDVLVRMKAVGICGSDVHYLKTLRCADFVVKEPMVIGHECAGVIEKVGSEVKTL   95 (365)
Q Consensus        18 ~~~~~~~~~--~~l~~~~~~~p~~~~~eVlI~v~~~~l~~~D~~~~~g~~~~~~~~~~p~~~G~e~~G~V~~vG~~v~~~   95 (365)
                      |+++++..+  ..+++++.+.|.++++||+|||.++++|+.|+....+..    ....|.++|+|++|+|+.+|++++.|
T Consensus         1 m~a~~~~~~~~~~~~~~~~~~p~~~~~ev~i~v~~~~i~~~d~~~~~~~~----~~~~~~~~g~e~~G~v~~vG~~v~~~   76 (339)
T cd08249           1 QKAAVLTGPGGGLLVVVDVPVPKPGPDEVLVKVKAVALNPVDWKHQDYGF----IPSYPAILGCDFAGTVVEVGSGVTRF   76 (339)
T ss_pred             CceEEeccCCCCcccccCCCCCCCCCCEEEEEEEEEEcCchheeeeeccc----ccCCCceeeeeeeEEEEEeCCCcCcC
Confidence            578888877  789999999999999999999999999999988764432    12346789999999999999999999


Q ss_pred             CCCCEEEEcCCcCCCCCccccCCCCCCCCCccccccCCCCcceeeEEeecCCceEECCCCCCcchhccch-hhHHHHHHH
Q 017868           96 VPGDRVALEPGISCWRCDHCKGGRYNLCPEMKFFATPPVHGSLANQVVHPADLCFKLPDNVSLEEGAMCE-PLSVGLHAC  174 (365)
Q Consensus        96 ~~Gd~V~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~v~~~~~~~iP~~~~~~~a~~~~-~~~~a~~~~  174 (365)
                      ++||+|+++....|+                    ....+|+|++|+.++.+.++++|+++++++++.++ ++.+||+++
T Consensus        77 ~~Gd~V~~~~~~~~~--------------------~~~~~g~~~~~~~v~~~~~~~ip~~~~~~~~~~~~~~~~ta~~~l  136 (339)
T cd08249          77 KVGDRVAGFVHGGNP--------------------NDPRNGAFQEYVVADADLTAKIPDNISFEEAATLPVGLVTAALAL  136 (339)
T ss_pred             CCCCEEEEEeccccC--------------------CCCCCCcccceEEechhheEECCCCCCHHHceecchHHHHHHHHH
Confidence            999999987432211                    01246999999999999999999999999998887 888999987


Q ss_pred             H-hcCC----------CCCCEEEEEcC-CHHHHHHHHHHHHHCCCCeEEEEeCChhHHHHHHHcCCCEEEeCCCCcccHH
Q 017868          175 R-RANI----------GPETNVLIMGA-GPIGLVTMLGAPRAFGAPRIVIVDVDDYRLSVAKEIGADNIVKVSTNLQDIA  242 (365)
Q Consensus       175 ~-~~~~----------~~g~~vlI~G~-g~~G~~ai~~l~~~~g~~~vi~v~~~~~~~~~~~~~g~~~~~~~~~~~~~~~  242 (365)
                      . ..++          ++++++||+|+ |.+|+++++ +++..|++ ++++. ++++.+.++++|++.+++..  ..++.
T Consensus       137 ~~~~~~~~~~~~~~~~~~~~~vlI~ga~g~vg~~~~~-~a~~~G~~-v~~~~-~~~~~~~~~~~g~~~v~~~~--~~~~~  211 (339)
T cd08249         137 FQKLGLPLPPPKPSPASKGKPVLIWGGSSSVGTLAIQ-LAKLAGYK-VITTA-SPKNFDLVKSLGADAVFDYH--DPDVV  211 (339)
T ss_pred             hccccCCCCCCCCCCCCCCCEEEEEcChhHHHHHHHH-HHHHcCCe-EEEEE-CcccHHHHHhcCCCEEEECC--CchHH
Confidence            4 4433          78999999997 899999999 99999995 55555 45888888999998887753  35666


Q ss_pred             HHHHHHHHHhCCCceEEEeCCCCHHHHHHHHHhccc--CCEEEEEccCCCCccccchHhhhcCcEEEeecc---c-----
Q 017868          243 EEVEKIQKAMGTGIDVSFDCAGLNKTMSTALGATCA--GGKVCLVGMGHHEMTVPLTPAAVREVDVVGVFR---Y-----  312 (365)
Q Consensus       243 ~~i~~~~~~~~~~~d~vid~~g~~~~~~~~~~~l~~--~G~~~~~g~~~~~~~~~~~~~~~~~~~i~~~~~---~-----  312 (365)
                      +.+++.   .++++|++||++|.+..+..+++++++  +|+++.++........ ................   .     
T Consensus       212 ~~l~~~---~~~~~d~vl~~~g~~~~~~~~~~~l~~~~~g~~v~~g~~~~~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~  287 (339)
T cd08249         212 EDIRAA---TGGKLRYALDCISTPESAQLCAEALGRSGGGKLVSLLPVPEETEP-RKGVKVKFVLGYTVFGEIPEDREFG  287 (339)
T ss_pred             HHHHHh---cCCCeeEEEEeeccchHHHHHHHHHhccCCCEEEEecCCCccccC-CCCceEEEEEeeeecccccccccch
Confidence            666554   357899999999975688999999999  9999999754332101 1111111111111111   1     


Q ss_pred             CCcHHHHHHHHHcCCCCCCCceEEEecCChhhHHHHHHHHhcCC-CceEEEEeC
Q 017868          313 KNTWPLCLELLRSGKIDVKPLVTHRFGFSQKEVEEAFETSARGG-TAIKVMFNL  365 (365)
Q Consensus       313 ~~~~~~~~~~l~~g~~~~~~~~~~~~~~~~~~~~~a~~~~~~~~-~~gk~vi~~  365 (365)
                      ...+.+++++++++.+.+.  ....+++.++++.+|++.+..++ ..+|+|+++
T Consensus       288 ~~~~~~~~~~~~~~~l~~~--~~~~~~~~~~~~~~a~~~~~~~~~~~~kvvv~~  339 (339)
T cd08249         288 EVFWKYLPELLEEGKLKPH--PVRVVEGGLEGVQEGLDLLRKGKVSGEKLVVRL  339 (339)
T ss_pred             HHHHHHHHHHHHcCCccCC--CceecCCcHHHHHHHHHHHHCCCccceEEEEeC
Confidence            2457789999999988543  44455622399999999999998 899999874

Member identified as possible enoyl reductase of the MDR family. 2-enoyl thioester reductase (ETR) catalyzes the NADPH-dependent dependent conversion of trans-2-enoyl acyl carrier protein/coenzyme A (ACP/CoA) to acyl-(ACP/CoA) in fatty acid synthesis. 2-enoyl thioester reductase activity has been linked in Candida tropicalis as essential in maintaining mitiochondrial respiratory function. This ETR family is a part of the medium chain dehydrogenase/reductase family, but lack the zinc coordination sites characteristic of the alcohol dehydrogenases in this family. NAD(P)(H)-dependent oxidoreductases are the major enzymes in the interconversion of alcohols and aldehydes, or ketones. Alcohol dehydrogenase in the liver converts ethanol and NAD+ to acetaldehyde and NADH, while in yeast and some other microorganisms ADH catalyzes the conversion acetaldehyde to ethanol in alcoholic fermentation. ADH is a member of the medium chain alcohol de

>cd05282 ETR_like 2-enoyl thioester reductase-like

Probab=100.00  E-value=3.3e-33  Score=254.59  Aligned_cols=296  Identities=26%  Similarity=0.368  Sum_probs=239.1

Q ss_pred             ceEEEEecCCCCCCCcEEEEEeeeeeCcccHhhhhccccCCccCCCCcccCccceEEEEEeCCCCCCCCCCCEEEEcCCc
Q 017868           28 TLKIQPFELPSLGPYDVLVRMKAVGICGSDVHYLKTLRCADFVVKEPMVIGHECAGVIEKVGSEVKTLVPGDRVALEPGI  107 (365)
Q Consensus        28 ~l~~~~~~~p~~~~~eVlI~v~~~~l~~~D~~~~~g~~~~~~~~~~p~~~G~e~~G~V~~vG~~v~~~~~Gd~V~~~~~~  107 (365)
                      .+++.+.+.|.+.+++|+|||.++++|+.|...+.|....  ...+|.++|+|++|+|+.+|++++++++||+|++.+  
T Consensus        13 ~~~~~~~~~~~~~~~~v~i~v~~~~~~~~d~~~~~~~~~~--~~~~~~~~g~e~~G~v~~~G~~v~~~~~Gd~V~~~~--   88 (323)
T cd05282          13 VLELVSLPIPPPGPGEVLVRMLAAPINPSDLITISGAYGS--RPPLPAVPGNEGVGVVVEVGSGVSGLLVGQRVLPLG--   88 (323)
T ss_pred             eEEeEeCCCCCCCCCeEEEEEEeccCCHHHHHHhcCcCCC--CCCCCCcCCcceEEEEEEeCCCCCCCCCCCEEEEeC--
Confidence            6778888999999999999999999999999887664322  124577899999999999999999999999998852  


Q ss_pred             CCCCCccccCCCCCCCCCccccccCCCCcceeeEEeecCCceEECCCCCCcchhccch-hhHHHHHHH-HhcCCCCCCEE
Q 017868          108 SCWRCDHCKGGRYNLCPEMKFFATPPVHGSLANQVVHPADLCFKLPDNVSLEEGAMCE-PLSVGLHAC-RRANIGPETNV  185 (365)
Q Consensus       108 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~v~~~~~~~iP~~~~~~~a~~~~-~~~~a~~~~-~~~~~~~g~~v  185 (365)
                                                ..|+|++|+.++...++++|+++++.+++.++ ...+|++++ +.+.+.+|++|
T Consensus        89 --------------------------~~g~~~~~~~~~~~~~~~lp~~~~~~~~a~~~~~~~ta~~~~~~~~~~~~~~~v  142 (323)
T cd05282          89 --------------------------GEGTWQEYVVAPADDLIPVPDSISDEQAAMLYINPLTAWLMLTEYLKLPPGDWV  142 (323)
T ss_pred             --------------------------CCCcceeEEecCHHHeEECCCCCCHHHHHHHhccHHHHHHHHHHhccCCCCCEE
Confidence                                      14899999999999999999999998888765 677888887 45678999999


Q ss_pred             EEEcC-CHHHHHHHHHHHHHCCCCeEEEEeCChhHHHHHHHcCCCEEEeCCCCcccHHHHHHHHHHHhCCCceEEEeCCC
Q 017868          186 LIMGA-GPIGLVTMLGAPRAFGAPRIVIVDVDDYRLSVAKEIGADNIVKVSTNLQDIAEEVEKIQKAMGTGIDVSFDCAG  264 (365)
Q Consensus       186 lI~G~-g~~G~~ai~~l~~~~g~~~vi~v~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~i~~~~~~~~~~~d~vid~~g  264 (365)
                      ||+|+ |.+|+++++ +++.+|++ ++++.+++++.+.++++|++.++++..  .++...+.+.+  .+.++|+++|++|
T Consensus       143 lI~g~~~~vg~~~~~-~a~~~g~~-v~~~~~~~~~~~~~~~~g~~~~~~~~~--~~~~~~~~~~~--~~~~~d~vl~~~g  216 (323)
T cd05282         143 IQNAANSAVGRMLIQ-LAKLLGFK-TINVVRRDEQVEELKALGADEVIDSSP--EDLAQRVKEAT--GGAGARLALDAVG  216 (323)
T ss_pred             EEcccccHHHHHHHH-HHHHCCCe-EEEEecChHHHHHHHhcCCCEEecccc--hhHHHHHHHHh--cCCCceEEEECCC
Confidence            99987 899999999 99999995 666777888888889999988776533  35555555443  3678999999999


Q ss_pred             CHHHHHHHHHhcccCCEEEEEccCCCC-ccccchHhhhcCcEEEeeccc-----------CCcHHHHHHHHHcCCCCCCC
Q 017868          265 LNKTMSTALGATCAGGKVCLVGMGHHE-MTVPLTPAAVREVDVVGVFRY-----------KNTWPLCLELLRSGKIDVKP  332 (365)
Q Consensus       265 ~~~~~~~~~~~l~~~G~~~~~g~~~~~-~~~~~~~~~~~~~~i~~~~~~-----------~~~~~~~~~~l~~g~~~~~~  332 (365)
                      +. .....+++++++|+++.+|..... ..++...+..++.++.+....           .+.+.+++++++++.+.  +
T Consensus       217 ~~-~~~~~~~~l~~~g~~v~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~l~--~  293 (323)
T cd05282         217 GE-SATRLARSLRPGGTLVNYGLLSGEPVPFPRSVFIFKDITVRGFWLRQWLHSATKEAKQETFAEVIKLVEAGVLT--T  293 (323)
T ss_pred             CH-HHHHHHHhhCCCCEEEEEccCCCCCCCCCHHHHhhcCceEEEEEehHhhccCCHHHHHHHHHHHHHHHhCCCcc--c
Confidence            86 567889999999999998764332 233333344478887776432           13578899999999884  4


Q ss_pred             ceEEEecCChhhHHHHHHHHhcCCCceEEEEe
Q 017868          333 LVTHRFGFSQKEVEEAFETSARGGTAIKVMFN  364 (365)
Q Consensus       333 ~~~~~~~~~~~~~~~a~~~~~~~~~~gk~vi~  364 (365)
                      ...+.|++  +++.+|++.+.++...+|+|++
T Consensus       294 ~~~~~~~~--~~~~~a~~~~~~~~~~~kvv~~  323 (323)
T cd05282         294 PVGAKFPL--EDFEEAVAAAEQPGRGGKVLLT  323 (323)
T ss_pred             CccceecH--HHHHHHHHHHhcCCCCceEeeC
Confidence            46778888  9999999999998888999874

2-enoyl thioester reductase (ETR) catalyzes the NADPH-dependent conversion of trans-2-enoyl acyl carrier protein/coenzyme A (ACP/CoA) to acyl-(ACP/CoA) in fatty acid synthesis. 2-enoyl thioester reductase activity has been linked in Candida tropicalis as essential in maintaining mitiochondrial respiratory function. This ETR family is a part of the medium chain dehydrogenase/reductase family, but lack the zinc coordination sites characteristic of the alcohol dehydrogenases in this family. NAD(P)(H)-dependent oxidoreductases are the major enzymes in the interconversion of alcohols and aldehydes, or ketones. Alcohol dehydrogenase in the liver converts ethanol and NAD+ to acetaldehyde and NADH, while in yeast and some other microorganisms ADH catalyzes the conversion acetaldehyde to ethanol in alcoholic fermentation. ADH is a member of the medium chain alcohol dehydrogenase family (MDR), which has a NAD(P)(H)-binding domain in a Rossman

>cd05280 MDR_yhdh_yhfp Yhdh and yhfp-like putative quinone oxidoreductases

Probab=100.00  E-value=4.5e-33  Score=253.92  Aligned_cols=308  Identities=20%  Similarity=0.266  Sum_probs=235.3

Q ss_pred             ceeEEEecCC---ceEEEEecCCCCCCCcEEEEEeeeeeCcccHhhhhccccCCccCCCCcccCccceEEEEEeCCCCCC
Q 017868           18 NMAAWLLGVN---TLKIQPFELPSLGPYDVLVRMKAVGICGSDVHYLKTLRCADFVVKEPMVIGHECAGVIEKVGSEVKT   94 (365)
Q Consensus        18 ~~~~~~~~~~---~l~~~~~~~p~~~~~eVlI~v~~~~l~~~D~~~~~g~~~~~~~~~~p~~~G~e~~G~V~~vG~~v~~   94 (365)
                      |+++++.+++   ++++.+.|.|.+.++||+|||.++++|+.|+..+.|....  ...+|.++|||++|+|+.+  +++.
T Consensus         1 ~~a~~~~~~~~~~~~~~~~~~~p~~~~~~v~v~v~~~~i~~~d~~~~~g~~~~--~~~~~~~~g~e~~G~v~~~--~~~~   76 (325)
T cd05280           1 FKALVVEEQDGGVSLFLRTLPLDDLPEGDVLIRVHYSSLNYKDALAATGNGGV--TRNYPHTPGIDAAGTVVSS--DDPR   76 (325)
T ss_pred             CceEEEcccCCCCcceEEeCCCCCCCCCeEEEEEEEeecChHHHHHhcCCCCC--CCCCCCccCcccEEEEEEe--CCCC
Confidence            5788888765   7999999999999999999999999999999988775321  1345778999999999999  4678


Q ss_pred             CCCCCEEEEcCCcCCCCCccccCCCCCCCCCccccccCCCCcceeeEEeecCCceEECCCCCCcchhccch-hhHHHHHH
Q 017868           95 LVPGDRVALEPGISCWRCDHCKGGRYNLCPEMKFFATPPVHGSLANQVVHPADLCFKLPDNVSLEEGAMCE-PLSVGLHA  173 (365)
Q Consensus        95 ~~~Gd~V~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~v~~~~~~~iP~~~~~~~a~~~~-~~~~a~~~  173 (365)
                      |++||+|++....                     .+. ..+|+|++|+.+++++++++|+++++++++.++ .+.+|+++
T Consensus        77 ~~~Gd~V~~~~~~---------------------~g~-~~~g~~~~~~~v~~~~~~~lp~~~~~~~aa~~~~~~~ta~~~  134 (325)
T cd05280          77 FREGDEVLVTGYD---------------------LGM-NTDGGFAEYVRVPADWVVPLPEGLSLREAMILGTAGFTAALS  134 (325)
T ss_pred             CCCCCEEEEcccc---------------------cCC-CCCceeEEEEEEchhhEEECCCCCCHHHHHhhHHHHHHHHHH
Confidence            9999999875210                     011 135899999999999999999999999988876 66778887


Q ss_pred             HHh---cCCC-CCCEEEEEcC-CHHHHHHHHHHHHHCCCCeEEEEeCChhHHHHHHHcCCCEEEeCCCCcccHHHHHHHH
Q 017868          174 CRR---ANIG-PETNVLIMGA-GPIGLVTMLGAPRAFGAPRIVIVDVDDYRLSVAKEIGADNIVKVSTNLQDIAEEVEKI  248 (365)
Q Consensus       174 ~~~---~~~~-~g~~vlI~G~-g~~G~~ai~~l~~~~g~~~vi~v~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~i~~~  248 (365)
                      ++.   .++. .+++|||+|+ |.+|+++++ +++..|++ ++++++++++.+.++++|++.+++...    ....+.+.
T Consensus       135 l~~~~~~~~~~~~~~vlI~g~~g~vg~~~~~-~a~~~g~~-v~~~~~~~~~~~~~~~~g~~~~~~~~~----~~~~~~~~  208 (325)
T cd05280         135 VHRLEDNGQTPEDGPVLVTGATGGVGSIAVA-ILAKLGYT-VVALTGKEEQADYLKSLGASEVLDRED----LLDESKKP  208 (325)
T ss_pred             HHHHhhccCCCCCCEEEEECCccHHHHHHHH-HHHHcCCE-EEEEeCCHHHHHHHHhcCCcEEEcchh----HHHHHHHH
Confidence            743   3345 3579999997 999999999 99999995 787888899999999999988765321    11122222


Q ss_pred             HHHhCCCceEEEeCCCCHHHHHHHHHhcccCCEEEEEccCCC-CccccchHhhhcCcEEEeeccc--C-----CcHHHHH
Q 017868          249 QKAMGTGIDVSFDCAGLNKTMSTALGATCAGGKVCLVGMGHH-EMTVPLTPAAVREVDVVGVFRY--K-----NTWPLCL  320 (365)
Q Consensus       249 ~~~~~~~~d~vid~~g~~~~~~~~~~~l~~~G~~~~~g~~~~-~~~~~~~~~~~~~~~i~~~~~~--~-----~~~~~~~  320 (365)
                        ..++++|++||++|.. .+...+++++++|+++.+|.... +..+....+..++.++.+....  .     +.++.+.
T Consensus       209 --~~~~~~d~vi~~~~~~-~~~~~~~~l~~~g~~v~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  285 (325)
T cd05280         209 --LLKARWAGAIDTVGGD-VLANLLKQTKYGGVVASCGNAAGPELTTTVLPFILRGVSLLGIDSVNCPMELRKQVWQKLA  285 (325)
T ss_pred             --hcCCCccEEEECCchH-HHHHHHHhhcCCCEEEEEecCCCCccccccchheeeeeEEEEEEeecCchhHHHHHHHHHH
Confidence              2246799999999974 88999999999999999985432 2233333444678887775432  1     2234455


Q ss_pred             HHHHcCCCCCCCceEEEecCChhhHHHHHHHHhcCCCceEEEEeC
Q 017868          321 ELLRSGKIDVKPLVTHRFGFSQKEVEEAFETSARGGTAIKVMFNL  365 (365)
Q Consensus       321 ~~l~~g~~~~~~~~~~~~~~~~~~~~~a~~~~~~~~~~gk~vi~~  365 (365)
                      +++..+..   +.+.++|++  +++++|++.+.++...||+|+++
T Consensus       286 ~~~~~~~~---~~~~~~~~~--~~~~~a~~~~~~~~~~gk~vv~~  325 (325)
T cd05280         286 TEWKPDLL---EIVVREISL--EELPEAIDRLLAGKHRGRTVVKI  325 (325)
T ss_pred             HHHhcCCc---cceeeEecH--HHHHHHHHHHhcCCcceEEEEeC
Confidence            55555522   346778888  99999999999999999999874

Yhdh and yhfp-like putative quinone oxidoreductases (QOR). QOR catalyzes the conversion of a quinone + NAD(P)H to a hydroquinone + NAD(P)+. Quinones are cyclic diones derived from aromatic compounds. Membrane bound QOR actin the respiratory chains of bacteria and mitochondria, while soluble QOR acts to protect from toxic quinones (e.g. DT-diaphorase) or as a soluble eye-lens protein in some vertebrates (e.g. zeta-crystalin). QOR reduces quinones through a semi-quinone intermediate via a NAD(P)H-dependent single electron transfer. QOR is a member of the medium chain dehydrogenase/reductase family, but lacks the zinc-binding sites of the prototypical alcohol dehydrogenases of this group. NAD(P)(H)-dependent oxidoreductases are the major enzymes in the interconversion of alcohols and aldehydes, or ketones. Alcohol dehydrogenase in the liver converts ethanol and NAD+ to acetaldehyde and NADH, while in yeast and so

>cd08289 MDR_yhfp_like Yhfp putative quinone oxidoreductases

Probab=100.00  E-value=1e-32  Score=251.70  Aligned_cols=310  Identities=18%  Similarity=0.241  Sum_probs=232.0

Q ss_pred             ceeEEEecCC---ceEEEEecCCCCCCCcEEEEEeeeeeCcccHhhhhccccCCccCCCCcccCccceEEEEEeCCCCCC
Q 017868           18 NMAAWLLGVN---TLKIQPFELPSLGPYDVLVRMKAVGICGSDVHYLKTLRCADFVVKEPMVIGHECAGVIEKVGSEVKT   94 (365)
Q Consensus        18 ~~~~~~~~~~---~l~~~~~~~p~~~~~eVlI~v~~~~l~~~D~~~~~g~~~~~~~~~~p~~~G~e~~G~V~~vG~~v~~   94 (365)
                      |||+++.+.+   .++++++|.|.+.++||+||+.++++|+.|.....+.  +.....+|.++|||++|+|+++|  +++
T Consensus         1 ~~a~~~~~~~~~~~~~~~~~~~p~~~~~ev~i~v~~~~i~~~d~~~~~~~--~~~~~~~~~~~g~e~~G~V~~~~--~~~   76 (326)
T cd08289           1 FQALVVEKDEDDVSVSVKNLTLDDLPEGDVLIRVAYSSVNYKDGLASIPG--GKIVKRYPFIPGIDLAGTVVESN--DPR   76 (326)
T ss_pred             CeeEEEeccCCcceeEEEEccCCCCCCCeEEEEEEEEecChHHhhhhcCC--ccccCCCCcCcccceeEEEEEcC--CCC
Confidence            5778887553   5888999999999999999999999999998765421  11123457899999999999854  577


Q ss_pred             CCCCCEEEEcCCcCCCCCccccCCCCCCCCCccccccCCCCcceeeEEeecCCceEECCCCCCcchhccch-hhHHHHHH
Q 017868           95 LVPGDRVALEPGISCWRCDHCKGGRYNLCPEMKFFATPPVHGSLANQVVHPADLCFKLPDNVSLEEGAMCE-PLSVGLHA  173 (365)
Q Consensus        95 ~~~Gd~V~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~v~~~~~~~iP~~~~~~~a~~~~-~~~~a~~~  173 (365)
                      |++||+|++.+..                     .+ ....|+|+||+.++++.++++|+++++++++.++ .+.+|+++
T Consensus        77 ~~~Gd~V~~~~~~---------------------~~-~~~~g~~~~~~~v~~~~~~~~p~~~~~~~a~~~~~~~~ta~~~  134 (326)
T cd08289          77 FKPGDEVIVTSYD---------------------LG-VSHHGGYSEYARVPAEWVVPLPKGLTLKEAMILGTAGFTAALS  134 (326)
T ss_pred             CCCCCEEEEcccc---------------------cC-CCCCCcceeEEEEcHHHeEECCCCCCHHHHhhhhhHHHHHHHH
Confidence            9999999876320                     01 1246999999999999999999999999998876 56678777


Q ss_pred             HH---hcCCC-CCCEEEEEcC-CHHHHHHHHHHHHHCCCCeEEEEeCChhHHHHHHHcCCCEEEeCCCCcccHHHHHHHH
Q 017868          174 CR---RANIG-PETNVLIMGA-GPIGLVTMLGAPRAFGAPRIVIVDVDDYRLSVAKEIGADNIVKVSTNLQDIAEEVEKI  248 (365)
Q Consensus       174 ~~---~~~~~-~g~~vlI~G~-g~~G~~ai~~l~~~~g~~~vi~v~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~i~~~  248 (365)
                      ++   ...+. .+++|||+|+ |.+|+++++ +++..|+ .++++++++++.++++++|++.+++..+  . ..+.++..
T Consensus       135 l~~~~~~~~~~~~~~vlI~g~~g~vg~~~~~-~a~~~g~-~v~~~~~~~~~~~~~~~~g~~~v~~~~~--~-~~~~~~~~  209 (326)
T cd08289         135 IHRLEENGLTPEQGPVLVTGATGGVGSLAVS-ILAKLGY-EVVASTGKADAADYLKKLGAKEVIPREE--L-QEESIKPL  209 (326)
T ss_pred             HHHHHhcCCCCCCCEEEEEcCCchHHHHHHH-HHHHCCC-eEEEEecCHHHHHHHHHcCCCEEEcchh--H-HHHHHHhh
Confidence            63   23333 4789999987 999999999 9999999 5777888899999999999987766432  1 23334333


Q ss_pred             HHHhCCCceEEEeCCCCHHHHHHHHHhcccCCEEEEEccCCC-CccccchHhhhcCcEEEeeccc---CCcHHHHHHHHH
Q 017868          249 QKAMGTGIDVSFDCAGLNKTMSTALGATCAGGKVCLVGMGHH-EMTVPLTPAAVREVDVVGVFRY---KNTWPLCLELLR  324 (365)
Q Consensus       249 ~~~~~~~~d~vid~~g~~~~~~~~~~~l~~~G~~~~~g~~~~-~~~~~~~~~~~~~~~i~~~~~~---~~~~~~~~~~l~  324 (365)
                         .+.++|++||++|. ......+++++++|+++.+|.... ........++.++.++.+....   .....++++.+.
T Consensus       210 ---~~~~~d~vld~~g~-~~~~~~~~~l~~~G~~i~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  285 (326)
T cd08289         210 ---EKQRWAGAVDPVGG-KTLAYLLSTLQYGGSVAVSGLTGGGEVETTVFPFILRGVNLLGIDSVECPMELRRRIWRRLA  285 (326)
T ss_pred             ---ccCCcCEEEECCcH-HHHHHHHHHhhcCCEEEEEeecCCCCCCcchhhhhhccceEEEEEeEecCchHHHHHHHHHH
Confidence               25689999999997 478899999999999999986432 2222344455788888886422   122333444333


Q ss_pred             cCCCC---CCCceEEEecCChhhHHHHHHHHhcCCCceEEEEeC
Q 017868          325 SGKID---VKPLVTHRFGFSQKEVEEAFETSARGGTAIKVMFNL  365 (365)
Q Consensus       325 ~g~~~---~~~~~~~~~~~~~~~~~~a~~~~~~~~~~gk~vi~~  365 (365)
                      . .+.   ..+.+.++|++  +++.+|++.+.+++..||+|+++
T Consensus       286 ~-~~~~~~~~~~~~~~~~l--~~~~~a~~~~~~~~~~gkvvv~~  326 (326)
T cd08289         286 T-DLKPTQLLNEIKQEITL--DELPEALKQILQGRVTGRTVVKL  326 (326)
T ss_pred             h-hcCccccccccceEeeH--HHHHHHHHHHhcCcccceEEEeC
Confidence            2 221   12345788888  99999999999999999999875

yhfp putative quinone oxidoreductases (QOR). QOR catalyzes the conversion of a quinone + NAD(P)H to a hydroquinone + NAD(P)+. Quinones are cyclic diones derived from aromatic compounds. Membrane bound QOR actin the respiratory chains of bacteria and mitochondria, while soluble QOR acts to protect from toxic quinones (e.g. DT-diaphorase) or as a soluble eye-lens protein in some vertebrates (e.g. zeta-crystalin). QOR reduces quinones through a semi-quinone intermediate via a NAD(P)H-dependent single electron transfer. QOR is a member of the medium chain dehydrogenase/reductase family, but lacks the zinc-binding sites of the prototypical alcohol dehydrogenases of this group. NAD(P)(H)-dependent oxidoreductases are the major enzymes in the interconversion of alcohols and aldehydes, or ketones. Alcohol dehydrogenase in the liver converts ethanol and NAD+ to acetaldehyde and NADH, while in yeast and some other microorganisms ADH

>TIGR02823 oxido_YhdH putative quinone oxidoreductase, YhdH/YhfP family

Probab=100.00  E-value=2.4e-32  Score=248.92  Aligned_cols=306  Identities=20%  Similarity=0.279  Sum_probs=232.5

Q ss_pred             eeEEEec---CCceEEEEecCCCCCCCcEEEEEeeeeeCcccHhhhhccccCCccCCCCcccCccceEEEEEeCCCCCCC
Q 017868           19 MAAWLLG---VNTLKIQPFELPSLGPYDVLVRMKAVGICGSDVHYLKTLRCADFVVKEPMVIGHECAGVIEKVGSEVKTL   95 (365)
Q Consensus        19 ~~~~~~~---~~~l~~~~~~~p~~~~~eVlI~v~~~~l~~~D~~~~~g~~~~~~~~~~p~~~G~e~~G~V~~vG~~v~~~   95 (365)
                      ||+++..   +..++++++|.|.+.++||+|||.++++|+.|+....|....  ....|.++|||++|+|+.  +++..|
T Consensus         1 ~a~~~~~~~~~~~~~~~~~~~p~~~~~~v~v~v~~~~i~~~d~~~~~g~~~~--~~~~~~~~g~e~~G~V~~--~~~~~~   76 (323)
T TIGR02823         1 KALVVEKEDGKVSAQVETLDLSDLPEGDVLIKVAYSSLNYKDALAITGKGGV--VRSYPMIPGIDAAGTVVS--SEDPRF   76 (323)
T ss_pred             CeEEEccCCCCcceeEeecCCCCCCCCeEEEEEEEEEcCHHHHHHHcCCCCC--CCCCCccceeeeEEEEEe--cCCCCC
Confidence            4555553   347889999999999999999999999999999888765321  124578899999999988  567789


Q ss_pred             CCCCEEEEcCCcCCCCCccccCCCCCCCCCccccccCCCCcceeeEEeecCCceEECCCCCCcchhccch-hhHHHHHHH
Q 017868           96 VPGDRVALEPGISCWRCDHCKGGRYNLCPEMKFFATPPVHGSLANQVVHPADLCFKLPDNVSLEEGAMCE-PLSVGLHAC  174 (365)
Q Consensus        96 ~~Gd~V~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~v~~~~~~~iP~~~~~~~a~~~~-~~~~a~~~~  174 (365)
                      ++||+|++.....                     + ....|++++|+.++++.++++|+++++++++.++ .+.+|+.++
T Consensus        77 ~~Gd~V~~~~~~~---------------------~-~~~~g~~~~~~~~~~~~~~~iP~~~~~~~aa~~~~~~~ta~~~~  134 (323)
T TIGR02823        77 REGDEVIVTGYGL---------------------G-VSHDGGYSQYARVPADWLVPLPEGLSLREAMALGTAGFTAALSV  134 (323)
T ss_pred             CCCCEEEEccCCC---------------------C-CCCCccceEEEEEchhheEECCCCCCHHHhhhhhhhHHHHHHHH
Confidence            9999998763100                     0 1235899999999999999999999999988876 566777665


Q ss_pred             ---HhcCCCCCC-EEEEEcC-CHHHHHHHHHHHHHCCCCeEEEEeCChhHHHHHHHcCCCEEEeCCCCcccHHHHHHHHH
Q 017868          175 ---RRANIGPET-NVLIMGA-GPIGLVTMLGAPRAFGAPRIVIVDVDDYRLSVAKEIGADNIVKVSTNLQDIAEEVEKIQ  249 (365)
Q Consensus       175 ---~~~~~~~g~-~vlI~G~-g~~G~~ai~~l~~~~g~~~vi~v~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~i~~~~  249 (365)
                         ....+.+|+ +|||+|+ |.+|+++++ +|+.+|++ ++++..++++.+.++++|++.+++.++  .+  ..++.. 
T Consensus       135 ~~~~~~~~~~~~~~vlI~g~~g~vg~~~~~-la~~~G~~-vi~~~~~~~~~~~~~~~g~~~~~~~~~--~~--~~~~~~-  207 (323)
T TIGR02823       135 MALERNGLTPEDGPVLVTGATGGVGSLAVA-ILSKLGYE-VVASTGKAEEEDYLKELGASEVIDRED--LS--PPGKPL-  207 (323)
T ss_pred             HHhhhcCCCCCCceEEEEcCCcHHHHHHHH-HHHHcCCe-EEEEeCCHHHHHHHHhcCCcEEEcccc--HH--HHHHHh-
Confidence               334588998 9999997 999999999 99999996 555556777778889999987766322  11  223332 


Q ss_pred             HHhCCCceEEEeCCCCHHHHHHHHHhcccCCEEEEEccCCC-CccccchHhhhcCcEEEeeccc-------CCcHHHHHH
Q 017868          250 KAMGTGIDVSFDCAGLNKTMSTALGATCAGGKVCLVGMGHH-EMTVPLTPAAVREVDVVGVFRY-------KNTWPLCLE  321 (365)
Q Consensus       250 ~~~~~~~d~vid~~g~~~~~~~~~~~l~~~G~~~~~g~~~~-~~~~~~~~~~~~~~~i~~~~~~-------~~~~~~~~~  321 (365)
                        .+.++|+++|++|.. .+...+++++++|+++.+|.... ........+..++.++.+....       .+.+.++.+
T Consensus       208 --~~~~~d~vld~~g~~-~~~~~~~~l~~~G~~v~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  284 (323)
T TIGR02823       208 --EKERWAGAVDTVGGH-TLANVLAQLKYGGAVAACGLAGGPDLPTTVLPFILRGVSLLGIDSVYCPMALREAAWQRLAT  284 (323)
T ss_pred             --cCCCceEEEECccHH-HHHHHHHHhCCCCEEEEEcccCCCCccccHHHHhhcceEEEEEeccccCchhHHHHHHHHHH
Confidence              234699999999965 77899999999999999986432 2222223445778888875432       123556667


Q ss_pred             HHHcCCCCCCCceEEEecCChhhHHHHHHHHhcCCCceEEEEeC
Q 017868          322 LLRSGKIDVKPLVTHRFGFSQKEVEEAFETSARGGTAIKVMFNL  365 (365)
Q Consensus       322 ~l~~g~~~~~~~~~~~~~~~~~~~~~a~~~~~~~~~~gk~vi~~  365 (365)
                      ++..+.+.  +. .+.|++  +++++|++.+.+++..+|+|+++
T Consensus       285 ~~~~~~~~--~~-~~~~~l--~~~~~a~~~~~~~~~~~k~vv~~  323 (323)
T TIGR02823       285 DLKPRNLE--SI-TREITL--EELPEALEQILAGQHRGRTVVDV  323 (323)
T ss_pred             HhhcCCCc--Cc-eeeecH--HHHHHHHHHHhCCCccceEEEeC
Confidence            77777763  33 457777  99999999999999999999874

This model represents a subfamily of pfam00107 as defined by Pfam, a superfamily in which some members are zinc-binding medium-chain alcohol dehydrogenases while others are quinone oxidoreductases with no bound zinc. This subfamily includes proteins studied crystallographically for insight into function: YhdH from Escherichia coli and YhfP from Bacillus subtilis. Members bind NADPH or NAD, but not zinc.

>cd08243 quinone_oxidoreductase_like_1 Quinone oxidoreductase (QOR)

Probab=100.00  E-value=2.8e-32  Score=248.03  Aligned_cols=305  Identities=24%  Similarity=0.325  Sum_probs=238.1

Q ss_pred             ceeEEEecC---CceEEEEecCCCCCCCcEEEEEeeeeeCcccHhhhhccccCCccCCCCcccCccceEEEEEeCCCCCC
Q 017868           18 NMAAWLLGV---NTLKIQPFELPSLGPYDVLVRMKAVGICGSDVHYLKTLRCADFVVKEPMVIGHECAGVIEKVGSEVKT   94 (365)
Q Consensus        18 ~~~~~~~~~---~~l~~~~~~~p~~~~~eVlI~v~~~~l~~~D~~~~~g~~~~~~~~~~p~~~G~e~~G~V~~vG~~v~~   94 (365)
                      |+++++...   ..+++.+.+.|.+.++||+|||.++++|+.|+....|...   ....|.++|+|++|+|+++|.  ..
T Consensus         1 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~v~v~~~~i~~~d~~~~~~~~~---~~~~~~~~g~e~~G~v~~vG~--~~   75 (320)
T cd08243           1 MKAIVIEQPGGPEVLKLREIPIPEPKPGWVLIRVKAFGLNRSEIFTRQGHSP---SVKFPRVLGIEAVGEVEEAPG--GT   75 (320)
T ss_pred             CeEEEEcCCCCccceEEeecCCCCCCCCEEEEEEEEEecCHHHHHHhcCCCC---CCCCCccccceeEEEEEEecC--CC
Confidence            466677644   3677778888889999999999999999999988776432   134578899999999999995  57


Q ss_pred             CCCCCEEEEcCCcCCCCCccccCCCCCCCCCccccccCCCCcceeeEEeecCCceEECCCCCCcchhccch-hhHHHHHH
Q 017868           95 LVPGDRVALEPGISCWRCDHCKGGRYNLCPEMKFFATPPVHGSLANQVVHPADLCFKLPDNVSLEEGAMCE-PLSVGLHA  173 (365)
Q Consensus        95 ~~~Gd~V~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~v~~~~~~~iP~~~~~~~a~~~~-~~~~a~~~  173 (365)
                      +++||+|+++....                      ....+|+|++|+.+++.+++++|+++++++++.++ ++.+||++
T Consensus        76 ~~~Gd~V~~~~~~~----------------------~~~~~g~~~~~~~~~~~~~~~ip~~~~~~~aa~~~~~~~ta~~~  133 (320)
T cd08243          76 FTPGQRVATAMGGM----------------------GRTFDGSYAEYTLVPNEQVYAIDSDLSWAELAALPETYYTAWGS  133 (320)
T ss_pred             CCCCCEEEEecCCC----------------------CCCCCcccceEEEcCHHHcEeCCCCCCHHHHHhcchHHHHHHHH
Confidence            99999998863210                      01245899999999999999999999999888775 88899999


Q ss_pred             HH-hcCCCCCCEEEEEcC-CHHHHHHHHHHHHHCCCCeEEEEeCChhHHHHHHHcCCCEEEeCCCCcccHHHHHHHHHHH
Q 017868          174 CR-RANIGPETNVLIMGA-GPIGLVTMLGAPRAFGAPRIVIVDVDDYRLSVAKEIGADNIVKVSTNLQDIAEEVEKIQKA  251 (365)
Q Consensus       174 ~~-~~~~~~g~~vlI~G~-g~~G~~ai~~l~~~~g~~~vi~v~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~i~~~~~~  251 (365)
                      +. ..++++|++|||+|+ |.+|+++++ +++..|++ ++++..++++.+.++++|++.++..   ..++.+.+++.   
T Consensus       134 l~~~~~~~~g~~vlV~ga~g~~g~~~~~-~a~~~g~~-v~~~~~~~~~~~~~~~~g~~~~~~~---~~~~~~~i~~~---  205 (320)
T cd08243         134 LFRSLGLQPGDTLLIRGGTSSVGLAALK-LAKALGAT-VTATTRSPERAALLKELGADEVVID---DGAIAEQLRAA---  205 (320)
T ss_pred             HHHhcCCCCCCEEEEEcCCChHHHHHHH-HHHHcCCE-EEEEeCCHHHHHHHHhcCCcEEEec---CccHHHHHHHh---
Confidence            85 467899999999987 999999999 99999995 7777788899999999999876542   23555555544   


Q ss_pred             hCCCceEEEeCCCCHHHHHHHHHhcccCCEEEEEccCCCCcc---ccchHh--hhcCcEEEeeccc---CCcHHHHHHHH
Q 017868          252 MGTGIDVSFDCAGLNKTMSTALGATCAGGKVCLVGMGHHEMT---VPLTPA--AVREVDVVGVFRY---KNTWPLCLELL  323 (365)
Q Consensus       252 ~~~~~d~vid~~g~~~~~~~~~~~l~~~G~~~~~g~~~~~~~---~~~~~~--~~~~~~i~~~~~~---~~~~~~~~~~l  323 (365)
                       ++++|+++|++|+ ......+++++++|+++.+|.......   ......  ..+++.+.+....   ...++++++++
T Consensus       206 -~~~~d~vl~~~~~-~~~~~~~~~l~~~g~~v~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  283 (320)
T cd08243         206 -PGGFDKVLELVGT-ATLKDSLRHLRPGGIVCMTGLLGGQWTLEDFNPMDDIPSGVNLTLTGSSSGDVPQTPLQELFDFV  283 (320)
T ss_pred             -CCCceEEEECCCh-HHHHHHHHHhccCCEEEEEccCCCCcccCCcchhhhhhhccceEEEecchhhhhHHHHHHHHHHH
Confidence             5789999999997 478899999999999999985322111   111111  2456666665432   24578899999


Q ss_pred             HcCCCCCCCceEEEecCChhhHHHHHHHHhcCCCceEEEE
Q 017868          324 RSGKIDVKPLVTHRFGFSQKEVEEAFETSARGGTAIKVMF  363 (365)
Q Consensus       324 ~~g~~~~~~~~~~~~~~~~~~~~~a~~~~~~~~~~gk~vi  363 (365)
                      +++.+.  +...+.|++  +++++|++.+.++...+|+|+
T Consensus       284 ~~~~~~--~~~~~~~~l--~~~~~a~~~~~~~~~~~kvvv  319 (320)
T cd08243         284 AAGHLD--IPPSKVFTF--DEIVEAHAYMESNRAFGKVVV  319 (320)
T ss_pred             HCCcee--cccccEEcH--HHHHHHHHHHHhCCCCCcEEe
Confidence            999884  445677888  999999999998888889886

NAD(P)(H)-dependent oxidoreductases are the major enzymes in the interconversion of alcohols and aldehydes, or ketones. The medium chain alcohol dehydrogenase family (MDR) have a NAD(P)(H)-binding domain in a Rossmann fold of a beta-alpha form. The N-terminal region typically has an all-beta catalytic domain. These proteins typically form dimers (typically higher plants, mammals) or tetramers (yeast, bacteria), and have 2 tightly bound zinc atoms per subunit.

>cd08253 zeta_crystallin Zeta-crystallin with NADP-dependent quinone reductase activity (QOR)

Probab=100.00  E-value=6.5e-32  Score=245.81  Aligned_cols=312  Identities=28%  Similarity=0.424  Sum_probs=245.0

Q ss_pred             ceeEEEecC---CceEEEEecCCCCCCCcEEEEEeeeeeCcccHhhhhccccCCccCCCCcccCccceEEEEEeCCCCCC
Q 017868           18 NMAAWLLGV---NTLKIQPFELPSLGPYDVLVRMKAVGICGSDVHYLKTLRCADFVVKEPMVIGHECAGVIEKVGSEVKT   94 (365)
Q Consensus        18 ~~~~~~~~~---~~l~~~~~~~p~~~~~eVlI~v~~~~l~~~D~~~~~g~~~~~~~~~~p~~~G~e~~G~V~~vG~~v~~   94 (365)
                      |+++++...   ..+++.++|.|.+.+++|+|++.++++|+.|+....|....  ....|.++|||++|+|+.+|+++++
T Consensus         1 ~~~~~~~~~~~~~~~~~~~~~~~~l~~~~v~i~v~~~~i~~~d~~~~~g~~~~--~~~~~~~~g~e~~G~v~~~g~~~~~   78 (325)
T cd08253           1 MRAIRYHEFGAPDVLRLGDLPVPTPGPGEVLVRVHASGVNPVDTYIRAGAYPG--LPPLPYVPGSDGAGVVEAVGEGVDG   78 (325)
T ss_pred             CceEEEcccCCcccceeeecCCCCCCCCEEEEEEEEEecChhHhhhccCCCCC--CCCCCeecccceEEEEEeeCCCCCC
Confidence            456666643   45888999999999999999999999999999887664321  2356889999999999999999999


Q ss_pred             CCCCCEEEEcCCcCCCCCccccCCCCCCCCCccccccCCCCcceeeEEeecCCceEECCCCCCcchhccch-hhHHHHHH
Q 017868           95 LVPGDRVALEPGISCWRCDHCKGGRYNLCPEMKFFATPPVHGSLANQVVHPADLCFKLPDNVSLEEGAMCE-PLSVGLHA  173 (365)
Q Consensus        95 ~~~Gd~V~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~v~~~~~~~iP~~~~~~~a~~~~-~~~~a~~~  173 (365)
                      |++||+|++....                    +   ....|++++|+.++++.++++|+++++++++.++ ++.+|+++
T Consensus        79 ~~~Gd~v~~~~~~--------------------~---~~~~g~~~~~~~~~~~~~~~ip~~~~~~~aa~~~~~~~~a~~~  135 (325)
T cd08253          79 LKVGDRVWLTNLG--------------------W---GRRQGTAAEYVVVPADQLVPLPDGVSFEQGAALGIPALTAYRA  135 (325)
T ss_pred             CCCCCEEEEeccc--------------------c---CCCCcceeeEEEecHHHcEeCCCCCCHHHHhhhhhHHHHHHHH
Confidence            9999999886320                    0   0135899999999999999999999999988776 88889998


Q ss_pred             HH-hcCCCCCCEEEEEcC-CHHHHHHHHHHHHHCCCCeEEEEeCChhHHHHHHHcCCCEEEeCCCCcccHHHHHHHHHHH
Q 017868          174 CR-RANIGPETNVLIMGA-GPIGLVTMLGAPRAFGAPRIVIVDVDDYRLSVAKEIGADNIVKVSTNLQDIAEEVEKIQKA  251 (365)
Q Consensus       174 ~~-~~~~~~g~~vlI~G~-g~~G~~ai~~l~~~~g~~~vi~v~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~i~~~~~~  251 (365)
                      +. ..++.+|++++|+|+ +++|+++++ +++..|+ .++++++++++.+.++++|++.+++..  ..++...+++... 
T Consensus       136 l~~~~~~~~g~~vlI~g~~~~~g~~~~~-~a~~~g~-~v~~~~~~~~~~~~~~~~g~~~~~~~~--~~~~~~~~~~~~~-  210 (325)
T cd08253         136 LFHRAGAKAGETVLVHGGSGAVGHAAVQ-LARWAGA-RVIATASSAEGAELVRQAGADAVFNYR--AEDLADRILAATA-  210 (325)
T ss_pred             HHHHhCCCCCCEEEEEcCCchHHHHHHH-HHHHcCC-EEEEEeCCHHHHHHHHHcCCCEEEeCC--CcCHHHHHHHHcC-
Confidence            85 488999999999986 999999999 8899998 577777888889988899998776643  3456555555432 


Q ss_pred             hCCCceEEEeCCCCHHHHHHHHHhcccCCEEEEEccCCCCccccchHhhhcCcEEEeeccc-------CCcHHHHHHHHH
Q 017868          252 MGTGIDVSFDCAGLNKTMSTALGATCAGGKVCLVGMGHHEMTVPLTPAAVREVDVVGVFRY-------KNTWPLCLELLR  324 (365)
Q Consensus       252 ~~~~~d~vid~~g~~~~~~~~~~~l~~~G~~~~~g~~~~~~~~~~~~~~~~~~~i~~~~~~-------~~~~~~~~~~l~  324 (365)
                       +.++|++++++|.. .....+++++.+|+++.++............+..++.++.+...+       .+.++++.+++.
T Consensus       211 -~~~~d~vi~~~~~~-~~~~~~~~l~~~g~~v~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  288 (325)
T cd08253         211 -GQGVDVIIEVLANV-NLAKDLDVLAPGGRIVVYGSGGLRGTIPINPLMAKEASIRGVLLYTATPEERAAAAEAIAAGLA  288 (325)
T ss_pred             -CCceEEEEECCchH-HHHHHHHhhCCCCEEEEEeecCCcCCCChhHHHhcCceEEeeehhhcCHHHHHHHHHHHHHHHH
Confidence             56899999999975 677888999999999999764322233333334566666654322       234666778888


Q ss_pred             cCCCCCCCceEEEecCChhhHHHHHHHHhcCCCceEEEEeC
Q 017868          325 SGKIDVKPLVTHRFGFSQKEVEEAFETSARGGTAIKVMFNL  365 (365)
Q Consensus       325 ~g~~~~~~~~~~~~~~~~~~~~~a~~~~~~~~~~gk~vi~~  365 (365)
                      ++.+  .+...+.|++  +++.++++.+.++...+|+++++
T Consensus       289 ~~~i--~~~~~~~~~~--~~~~~~~~~~~~~~~~~kvv~~~  325 (325)
T cd08253         289 DGAL--RPVIAREYPL--EEAAAAHEAVESGGAIGKVVLDP  325 (325)
T ss_pred             CCCc--cCccccEEcH--HHHHHHHHHHHcCCCcceEEEeC
Confidence            8887  4446677888  99999999999999999999874

Zeta-crystallin is a eye lens protein with NADP-dependent quinone reductase activity (QOR). It has been cited as a structural component in mammalian eyes, but also has homology to quinone reductases in unrelated species. QOR catalyzes the conversion of a quinone and NAD(P)H to a hydroquinone and NAD(P+. Quinones are cyclic diones derived from aromatic compounds. Membrane bound QOR acts in the respiratory chains of bacteria and mitochondria, while soluble QOR acts to protect from toxic quinones (e.g. DT-diaphorase) or as a soluble eye-lens protein in some vertebrates (e.g. zeta-crystalin). QOR reduces quinones through a semi-quinone intermediate via a NAD(P)H-dependent single electron transfer. QOR is a member of the medium chain dehydrogenase/reductase family, but lacks the zinc-binding sites of the prototypical alcohol dehydrogenases of this group. Alcohol dehydrogenase in the liver converts

>cd08252 AL_MDR Arginate lyase and other MDR family members

Probab=100.00  E-value=6.6e-32  Score=247.38  Aligned_cols=307  Identities=22%  Similarity=0.276  Sum_probs=238.9

Q ss_pred             ceeEEEecCCc------eEEEEecCCCCCCCcEEEEEeeeeeCcccHhhhhccccCCccCCCCcccCccceEEEEEeCCC
Q 017868           18 NMAAWLLGVNT------LKIQPFELPSLGPYDVLVRMKAVGICGSDVHYLKTLRCADFVVKEPMVIGHECAGVIEKVGSE   91 (365)
Q Consensus        18 ~~~~~~~~~~~------l~~~~~~~p~~~~~eVlI~v~~~~l~~~D~~~~~g~~~~~~~~~~p~~~G~e~~G~V~~vG~~   91 (365)
                      |++.++.++++      +...+++.|++.+++|+|++.++++|+.|+....+...   ....|.++|+|++|+|+.+|++
T Consensus         1 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~v~v~~~~i~~~d~~~~~~~~~---~~~~~~~~g~e~~G~v~~~G~~   77 (336)
T cd08252           1 MKAIGFTQPLPITDPDSLIDIELPKPVPGGRDLLVRVEAVSVNPVDTKVRAGGAP---VPGQPKILGWDASGVVEAVGSE   77 (336)
T ss_pred             CceEEecCCCCCCcccceeEccCCCCCCCCCEEEEEEEEEEcCHHHHHHHcCCCC---CCCCCcccccceEEEEEEcCCC
Confidence            46778786643      56667888888999999999999999999988765321   1345678999999999999999


Q ss_pred             CCCCCCCCEEEEcCCcCCCCCccccCCCCCCCCCccccccCCCCcceeeEEeecCCceEECCCCCCcchhccch-hhHHH
Q 017868           92 VKTLVPGDRVALEPGISCWRCDHCKGGRYNLCPEMKFFATPPVHGSLANQVVHPADLCFKLPDNVSLEEGAMCE-PLSVG  170 (365)
Q Consensus        92 v~~~~~Gd~V~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~v~~~~~~~iP~~~~~~~a~~~~-~~~~a  170 (365)
                      ++.|++||+|+....                         ....|+|++|+.++.++++++|+++++++++.++ ...+|
T Consensus        78 v~~~~~Gd~V~~~~~-------------------------~~~~g~~~~~~~v~~~~~~~ip~~~~~~~~~~~~~~~~ta  132 (336)
T cd08252          78 VTLFKVGDEVYYAGD-------------------------ITRPGSNAEYQLVDERIVGHKPKSLSFAEAAALPLTSLTA  132 (336)
T ss_pred             CCCCCCCCEEEEcCC-------------------------CCCCccceEEEEEchHHeeeCCCCCCHHHhhhhhhHHHHH
Confidence            999999999987421                         0135899999999999999999999999888776 66788


Q ss_pred             HHHH-HhcCCCC-----CCEEEEEcC-CHHHHHHHHHHHHHCC-CCeEEEEeCChhHHHHHHHcCCCEEEeCCCCcccHH
Q 017868          171 LHAC-RRANIGP-----ETNVLIMGA-GPIGLVTMLGAPRAFG-APRIVIVDVDDYRLSVAKEIGADNIVKVSTNLQDIA  242 (365)
Q Consensus       171 ~~~~-~~~~~~~-----g~~vlI~G~-g~~G~~ai~~l~~~~g-~~~vi~v~~~~~~~~~~~~~g~~~~~~~~~~~~~~~  242 (365)
                      |+++ +.+.+.+     |++|+|+|+ |++|+++++ +++.+| + .++++++++++.++++++|++.+++..   .++.
T Consensus       133 ~~~l~~~~~~~~~~~~~g~~vlV~g~~g~vg~~~~~-~a~~~G~~-~v~~~~~~~~~~~~~~~~g~~~~~~~~---~~~~  207 (336)
T cd08252         133 WEALFDRLGISEDAENEGKTLLIIGGAGGVGSIAIQ-LAKQLTGL-TVIATASRPESIAWVKELGADHVINHH---QDLA  207 (336)
T ss_pred             HHHHHHhcCCCCCcCCCCCEEEEEcCCchHHHHHHH-HHHHcCCc-EEEEEcCChhhHHHHHhcCCcEEEeCC---ccHH
Confidence            8886 5577777     999999986 999999999 999999 6 678888888999999999998877643   2455


Q ss_pred             HHHHHHHHHhCCCceEEEeCCCCHHHHHHHHHhcccCCEEEEEccCCCCccccchHhhhcCcEEEeeccc----------
Q 017868          243 EEVEKIQKAMGTGIDVSFDCAGLNKTMSTALGATCAGGKVCLVGMGHHEMTVPLTPAAVREVDVVGVFRY----------  312 (365)
Q Consensus       243 ~~i~~~~~~~~~~~d~vid~~g~~~~~~~~~~~l~~~G~~~~~g~~~~~~~~~~~~~~~~~~~i~~~~~~----------  312 (365)
                      +.++..   .++++|+++|++|....+..++++++.+|+++.+|...  ...+...+..++.++.+....          
T Consensus       208 ~~i~~~---~~~~~d~vl~~~~~~~~~~~~~~~l~~~g~~v~~g~~~--~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  282 (336)
T cd08252         208 EQLEAL---GIEPVDYIFCLTDTDQHWDAMAELIAPQGHICLIVDPQ--EPLDLGPLKSKSASFHWEFMFTRSMFQTPDM  282 (336)
T ss_pred             HHHHhh---CCCCCCEEEEccCcHHHHHHHHHHhcCCCEEEEecCCC--CcccchhhhcccceEEEEEeeccccccccch
Confidence            555432   24689999999997668889999999999999997542  233333344566666653321          


Q ss_pred             ---CCcHHHHHHHHHcCCCCCCC-ceEEEecCChhhHHHHHHHHhcCCCceEEEEe
Q 017868          313 ---KNTWPLCLELLRSGKIDVKP-LVTHRFGFSQKEVEEAFETSARGGTAIKVMFN  364 (365)
Q Consensus       313 ---~~~~~~~~~~l~~g~~~~~~-~~~~~~~~~~~~~~~a~~~~~~~~~~gk~vi~  364 (365)
                         .+.+.++++++.++.+.... ...+.+++  +++.+|++.+.++...+|++++
T Consensus       283 ~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~--~~~~~a~~~~~~~~~~~~vv~~  336 (336)
T cd08252         283 IEQHEILNEVADLLDAGKLKTTLTETLGPINA--ENLREAHALLESGKTIGKIVLE  336 (336)
T ss_pred             hhHHHHHHHHHHHHHCCCEecceeeeecCCCH--HHHHHHHHHHHcCCccceEEeC
Confidence               13477899999999884221 11233556  9999999999999899999874

This group contains a structure identified as an arginate lyase. Other members are identified quinone reductases, alginate lyases, and other proteins related to the zinc-dependent dehydrogenases/reductases. QOR catalyzes the conversion of a quinone and NAD(P)H to a hydroquinone and NAD(P+. Quinones are cyclic diones derived from aromatic compounds. Membrane bound QOR acts in the respiratory chains of bacteria and mitochondria, while soluble QOR acts to protect from toxic quinones (e.g. DT-diaphorase) or as a soluble eye-lens protein in some vertebrates (e.g. zeta-crystalin). QOR reduces quinones through a semi-quinone intermediate via a NAD(P)H-dependent single electron transfer. QOR is a member of the medium chain dehydrogenase/reductase family, but lacks the zinc-binding sites of the prototypical alcohol dehydrogenases of this group. Alcohol dehydrogenase in the liver converts ethanol and NAD+ to acetaldehyde and NADH, whil

>cd08248 RTN4I1 Human Reticulon 4 Interacting Protein 1

Probab=100.00  E-value=2.8e-32  Score=251.23  Aligned_cols=307  Identities=24%  Similarity=0.303  Sum_probs=231.7

Q ss_pred             ceeEEEecCCc----eEEEEecCCCC-CCCcEEEEEeeeeeCcccHhhhhccccC------------CccCCCCcccCcc
Q 017868           18 NMAAWLLGVNT----LKIQPFELPSL-GPYDVLVRMKAVGICGSDVHYLKTLRCA------------DFVVKEPMVIGHE   80 (365)
Q Consensus        18 ~~~~~~~~~~~----l~~~~~~~p~~-~~~eVlI~v~~~~l~~~D~~~~~g~~~~------------~~~~~~p~~~G~e   80 (365)
                      |+++++.+..+    +++.+.+.|.| .++||+|||.++++|+.|.....|...+            .....+|.++|||
T Consensus         1 ~~a~~~~~~~~~~~~~~~~~~~~p~~~~~~ev~v~v~~~~i~~~d~~~~~g~~~~~~~~~~~~~~~~~~~~~~p~~~G~e   80 (350)
T cd08248           1 MKAWQIHSYGGIDSLLLLENARIPVIRKPNQVLIKVHAASVNPIDVLMRSGYGRTLLNKKRKPQSCKYSGIEFPLTLGRD   80 (350)
T ss_pred             CceEEecccCCCcceeeecccCCCCCCCCCeEEEEEEEEecCchhHHHHcCCccchhhhhhccccccccCCCCCeeecce
Confidence            56777665432    88999999999 5999999999999999999988763110            0124568899999


Q ss_pred             ceEEEEEeCCCCCCCCCCCEEEEcCCcCCCCCccccCCCCCCCCCccccccCCCCcceeeEEeecCCceEECCCCCCcch
Q 017868           81 CAGVIEKVGSEVKTLVPGDRVALEPGISCWRCDHCKGGRYNLCPEMKFFATPPVHGSLANQVVHPADLCFKLPDNVSLEE  160 (365)
Q Consensus        81 ~~G~V~~vG~~v~~~~~Gd~V~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~v~~~~~~~iP~~~~~~~  160 (365)
                      ++|+|+.+|+++++|++||+|++....                         ...|+|++|+.+++++++++|++++++.
T Consensus        81 ~~G~v~~vG~~v~~~~~Gd~V~~~~~~-------------------------~~~g~~~~~~~v~~~~~~~lp~~~~~~~  135 (350)
T cd08248          81 CSGVVVDIGSGVKSFEIGDEVWGAVPP-------------------------WSQGTHAEYVVVPENEVSKKPKNLSHEE  135 (350)
T ss_pred             eEEEEEecCCCcccCCCCCEEEEecCC-------------------------CCCccceeEEEecHHHeecCCCCCCHHH
Confidence            999999999999999999999885321                         1358999999999999999999999998


Q ss_pred             hccch-hhHHHHHHHH-hcCCC----CCCEEEEEcC-CHHHHHHHHHHHHHCCCCeEEEEeCChhHHHHHHHcCCCEEEe
Q 017868          161 GAMCE-PLSVGLHACR-RANIG----PETNVLIMGA-GPIGLVTMLGAPRAFGAPRIVIVDVDDYRLSVAKEIGADNIVK  233 (365)
Q Consensus       161 a~~~~-~~~~a~~~~~-~~~~~----~g~~vlI~G~-g~~G~~ai~~l~~~~g~~~vi~v~~~~~~~~~~~~~g~~~~~~  233 (365)
                      ++.++ ...+||+++. .+.+.    +|++|+|+|+ |++|+++++ +++.+|++ ++++.++ ++.+.++++|++.+++
T Consensus       136 aa~~~~~~~ta~~~l~~~~~~~~~~~~g~~vlI~g~~g~ig~~~~~-~a~~~G~~-v~~~~~~-~~~~~~~~~g~~~~~~  212 (350)
T cd08248         136 AASLPYAGLTAWSALVNVGGLNPKNAAGKRVLILGGSGGVGTFAIQ-LLKAWGAH-VTTTCST-DAIPLVKSLGADDVID  212 (350)
T ss_pred             HhhchhHHHHHHHHHHHhccCCCccCCCCEEEEECCCChHHHHHHH-HHHHCCCe-EEEEeCc-chHHHHHHhCCceEEE
Confidence            88776 7888999874 45554    4999999986 999999999 99999995 5555544 6778889999887766


Q ss_pred             CCCCcccHHHHHHHHHHHhCCCceEEEeCCCCHHHHHHHHHhcccCCEEEEEccCCCCc----cc----cchHhhhcCcE
Q 017868          234 VSTNLQDIAEEVEKIQKAMGTGIDVSFDCAGLNKTMSTALGATCAGGKVCLVGMGHHEM----TV----PLTPAAVREVD  305 (365)
Q Consensus       234 ~~~~~~~~~~~i~~~~~~~~~~~d~vid~~g~~~~~~~~~~~l~~~G~~~~~g~~~~~~----~~----~~~~~~~~~~~  305 (365)
                      ..  ..++.+.+.   .  .+++|++||++|.. ....++++++++|+++.++......    ..    ......+....
T Consensus       213 ~~--~~~~~~~l~---~--~~~vd~vi~~~g~~-~~~~~~~~l~~~G~~v~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~  284 (350)
T cd08248         213 YN--NEDFEEELT---E--RGKFDVILDTVGGD-TEKWALKLLKKGGTYVTLVSPLLKNTDKLGLVGGMLKSAVDLLKKN  284 (350)
T ss_pred             CC--ChhHHHHHH---h--cCCCCEEEECCChH-HHHHHHHHhccCCEEEEecCCcccccccccccchhhhhHHHHHHHH
Confidence            43  234444332   2  46899999999976 7889999999999999987432110    00    01111111111


Q ss_pred             ---------EEe-e-cccCCcHHHHHHHHHcCCCCCCCceEEEecCChhhHHHHHHHHhcCCCceEEEEe
Q 017868          306 ---------VVG-V-FRYKNTWPLCLELLRSGKIDVKPLVTHRFGFSQKEVEEAFETSARGGTAIKVMFN  364 (365)
Q Consensus       306 ---------i~~-~-~~~~~~~~~~~~~l~~g~~~~~~~~~~~~~~~~~~~~~a~~~~~~~~~~gk~vi~  364 (365)
                               +.. . ......+.+++++++++.+  .+.+++.|++  +++.+|++.+.++...+|++++
T Consensus       285 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~--~~~~~~~~~~--~~~~~a~~~~~~~~~~~~vv~~  350 (350)
T cd08248         285 VKSLLKGSHYRWGFFSPSGSALDELAKLVEDGKI--KPVIDKVFPF--EEVPEAYEKVESGHARGKTVIK  350 (350)
T ss_pred             HHHHhcCCCeeEEEECCCHHHHHHHHHHHhCCCE--ecccceeecH--HHHHHHHHHHhcCCCceEEEeC
Confidence                     111 1 1124568899999999988  4456788888  9999999999988888898874

Human Reticulon 4 Interacting Protein 1 is a member of the medium chain dehydrogenase/ reductase (MDR) family. Riticulons are endoplasmic reticulum associated proteins involved in membrane trafficking and neuroendocrine secretion. The MDR/zinc-dependent alcohol dehydrogenase-like family, which contains the zinc-dependent alcohol dehydrogenase (ADH-Zn) and related proteins, is a diverse group of proteins related to the first identified member, class I mammalian ADH. MDRs display a broad range of activities and are distinguished from the smaller short chain dehydrogenases (~ 250 amino acids vs. the ~ 350 amino acids of the MDR). The MDR proteins have 2 domains: a C-terminal NAD(P) binding-Rossmann fold domain of a beta-alpha form and an N-terminal catalytic domain with distant homology to GroES.

>cd05276 p53_inducible_oxidoreductase PIG3 p53-inducible quinone oxidoreductase

Probab=100.00  E-value=2e-31  Score=242.32  Aligned_cols=305  Identities=25%  Similarity=0.362  Sum_probs=242.4

Q ss_pred             ceeEEEec---CCceEEEEecCCCCCCCcEEEEEeeeeeCcccHhhhhccccCCccCCCCcccCccceEEEEEeCCCCCC
Q 017868           18 NMAAWLLG---VNTLKIQPFELPSLGPYDVLVRMKAVGICGSDVHYLKTLRCADFVVKEPMVIGHECAGVIEKVGSEVKT   94 (365)
Q Consensus        18 ~~~~~~~~---~~~l~~~~~~~p~~~~~eVlI~v~~~~l~~~D~~~~~g~~~~~~~~~~p~~~G~e~~G~V~~vG~~v~~   94 (365)
                      ||++++.+   +..+++.+.+.|.+.++||+|||.++++|+.|+....|...  ....+|.++|+|++|+|+.+|++++.
T Consensus         1 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~v~v~~~~i~~~d~~~~~~~~~--~~~~~~~~~g~e~~G~v~~vg~~~~~   78 (323)
T cd05276           1 MKAIVIKEPGGPEVLELGEVPKPAPGPGEVLIRVAAAGVNRADLLQRQGLYP--PPPGASDILGLEVAGVVVAVGPGVTG   78 (323)
T ss_pred             CeEEEEecCCCcccceEEecCCCCCCCCEEEEEEEEeecCHHHHHHhCCCCC--CCCCCCCcccceeEEEEEeeCCCCCC
Confidence            57788775   45688888888888999999999999999999988765432  12345789999999999999999999


Q ss_pred             CCCCCEEEEcCCcCCCCCccccCCCCCCCCCccccccCCCCcceeeEEeecCCceEECCCCCCcchhccch-hhHHHHHH
Q 017868           95 LVPGDRVALEPGISCWRCDHCKGGRYNLCPEMKFFATPPVHGSLANQVVHPADLCFKLPDNVSLEEGAMCE-PLSVGLHA  173 (365)
Q Consensus        95 ~~~Gd~V~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~v~~~~~~~iP~~~~~~~a~~~~-~~~~a~~~  173 (365)
                      +++||+|+++.                            .+|+|++|+.+++++++++|+++++.+++.+. ++.+++++
T Consensus        79 ~~~Gd~V~~~~----------------------------~~g~~~~~~~~~~~~~~~~p~~~~~~~~~~l~~~~~~a~~~  130 (323)
T cd05276          79 WKVGDRVCALL----------------------------AGGGYAEYVVVPAGQLLPVPEGLSLVEAAALPEVFFTAWQN  130 (323)
T ss_pred             CCCCCEEEEec----------------------------CCCceeEEEEcCHHHhccCCCCCCHHHHhhchhHHHHHHHH
Confidence            99999998751                            24899999999999999999999998888775 78889998


Q ss_pred             HH-hcCCCCCCEEEEEcC-CHHHHHHHHHHHHHCCCCeEEEEeCChhHHHHHHHcCCCEEEeCCCCcccHHHHHHHHHHH
Q 017868          174 CR-RANIGPETNVLIMGA-GPIGLVTMLGAPRAFGAPRIVIVDVDDYRLSVAKEIGADNIVKVSTNLQDIAEEVEKIQKA  251 (365)
Q Consensus       174 ~~-~~~~~~g~~vlI~G~-g~~G~~ai~~l~~~~g~~~vi~v~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~i~~~~~~  251 (365)
                      +. ...+.++++++|+|+ +++|+++++ +++..|++ ++.+++++++.+.++++|++.+++..  ..++.+.+.+... 
T Consensus       131 ~~~~~~~~~~~~vlv~g~~~~ig~~~~~-~~~~~g~~-v~~~~~~~~~~~~~~~~g~~~~~~~~--~~~~~~~~~~~~~-  205 (323)
T cd05276         131 LFQLGGLKAGETVLIHGGASGVGTAAIQ-LAKALGAR-VIATAGSEEKLEACRALGADVAINYR--TEDFAEEVKEATG-  205 (323)
T ss_pred             HHHhcCCCCCCEEEEEcCcChHHHHHHH-HHHHcCCE-EEEEcCCHHHHHHHHHcCCCEEEeCC--chhHHHHHHHHhC-
Confidence            74 578899999999987 999999999 88999995 77777888888888889987766543  2455555554432 


Q ss_pred             hCCCceEEEeCCCCHHHHHHHHHhcccCCEEEEEccCCC-CccccchHhhhcCcEEEeecccC-----------CcHHHH
Q 017868          252 MGTGIDVSFDCAGLNKTMSTALGATCAGGKVCLVGMGHH-EMTVPLTPAAVREVDVVGVFRYK-----------NTWPLC  319 (365)
Q Consensus       252 ~~~~~d~vid~~g~~~~~~~~~~~l~~~G~~~~~g~~~~-~~~~~~~~~~~~~~~i~~~~~~~-----------~~~~~~  319 (365)
                       +.++|++++++|.. .....++++.++|+++.++.... ........++.+++++.++....           +.+.++
T Consensus       206 -~~~~d~vi~~~g~~-~~~~~~~~~~~~g~~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  283 (323)
T cd05276         206 -GRGVDVILDMVGGD-YLARNLRALAPDGRLVLIGLLGGAKAELDLAPLLRKRLTLTGSTLRSRSLEEKAALAAAFREHV  283 (323)
T ss_pred             -CCCeEEEEECCchH-HHHHHHHhhccCCEEEEEecCCCCCCCCchHHHHHhCCeEEEeeccchhhhccHHHHHHHHHHH
Confidence             56899999999975 57788999999999999875432 22233333446788888765321           235678


Q ss_pred             HHHHHcCCCCCCCceEEEecCChhhHHHHHHHHhcCCCceEEEE
Q 017868          320 LELLRSGKIDVKPLVTHRFGFSQKEVEEAFETSARGGTAIKVMF  363 (365)
Q Consensus       320 ~~~l~~g~~~~~~~~~~~~~~~~~~~~~a~~~~~~~~~~gk~vi  363 (365)
                      ++++.++.+  .+..++.|++  +++++|++.+.++...+|+++
T Consensus       284 ~~~~~~~~~--~~~~~~~~~~--~~~~~a~~~~~~~~~~~kvv~  323 (323)
T cd05276         284 WPLFASGRI--RPVIDKVFPL--EEAAEAHRRMESNEHIGKIVL  323 (323)
T ss_pred             HHHHHCCCc--cCCcceEEcH--HHHHHHHHHHHhCCCcceEeC
Confidence            888988888  4456788888  999999999998888888874

PIG3 p53-inducible quinone oxidoreductase, a medium chain dehydrogenase/reductase family member, acts in the apoptotic pathway. PIG3 reduces ortho-quinones, but its apoptotic activity has been attributed to oxidative stress generation, since overexpression of PIG3 accumulates reactive oxygen species. PIG3 resembles the MDR family member quinone reductases, which catalyze the reduction of quinone to hydroxyquinone. NAD(P)(H)-dependent oxidoreductases are the major enzymes in the interconversion of alcohols and aldehydes or ketones. Alcohol dehydrogenase in the liver converts ethanol and NAD+ to acetaldehyde and NADH, while in yeast and some other microorganisms ADH catalyzes the conversion acetaldehyde to ethanol in alcoholic fermentation. ADH is a member of the medium chain alcohol dehydrogenase family (MDR), which has a NAD(P)(H)-binding domain in a Rossmann fold of a beta-alpha form. The NAD(H)-binding

>cd08272 MDR6 Medium chain dehydrogenases/reductase (MDR)/zinc-dependent alcohol dehydrogenase-like family

Probab=100.00  E-value=2.1e-31  Score=242.69  Aligned_cols=307  Identities=27%  Similarity=0.361  Sum_probs=240.4

Q ss_pred             ceeEEEecCC---ceEEEEecCCCCCCCcEEEEEeeeeeCcccHhhhhccccCCccCCCCcccCccceEEEEEeCCCCCC
Q 017868           18 NMAAWLLGVN---TLKIQPFELPSLGPYDVLVRMKAVGICGSDVHYLKTLRCADFVVKEPMVIGHECAGVIEKVGSEVKT   94 (365)
Q Consensus        18 ~~~~~~~~~~---~l~~~~~~~p~~~~~eVlI~v~~~~l~~~D~~~~~g~~~~~~~~~~p~~~G~e~~G~V~~vG~~v~~   94 (365)
                      |+++++.+.+   .+++.+.+.|.+.+++|+|+|.++++|+.|+....+...  .....|.++|+|++|+|+.+|+++.+
T Consensus         1 ~~a~~~~~~~~~~~~~~~~~~~~~~~~~~v~v~v~~~~i~~~d~~~~~~~~~--~~~~~~~~~g~e~~G~v~~~G~~~~~   78 (326)
T cd08272           1 MKALVLESFGGPEVFELREVPRPQPGPGQVLVRVHASGVNPLDTKIRRGGAA--ARPPLPAILGCDVAGVVEAVGEGVTR   78 (326)
T ss_pred             CeEEEEccCCCchheEEeecCCCCCCCCeEEEEEEEEecCHHHHHHhCCCCC--CCCCCCcccccceeEEEEEeCCCCCC
Confidence            5788887653   488888888889999999999999999999988766432  11334778999999999999999999


Q ss_pred             CCCCCEEEEcCCcCCCCCccccCCCCCCCCCccccccCCCCcceeeEEeecCCceEECCCCCCcchhccch-hhHHHHHH
Q 017868           95 LVPGDRVALEPGISCWRCDHCKGGRYNLCPEMKFFATPPVHGSLANQVVHPADLCFKLPDNVSLEEGAMCE-PLSVGLHA  173 (365)
Q Consensus        95 ~~~Gd~V~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~v~~~~~~~iP~~~~~~~a~~~~-~~~~a~~~  173 (365)
                      |++||+|+++...                    +   ....|+|++|+.+++++++++|+++++..++.++ ...+|+++
T Consensus        79 ~~~Gd~V~~~~~~--------------------~---~~~~g~~~~~~~v~~~~~~~~p~~~~~~~~~~~~~~~~~a~~~  135 (326)
T cd08272          79 FRVGDEVYGCAGG--------------------L---GGLQGSLAEYAVVDARLLALKPANLSMREAAALPLVGITAWEG  135 (326)
T ss_pred             CCCCCEEEEccCC--------------------c---CCCCCceeEEEEecHHHcccCCCCCCHHHHHHhHHHHHHHHHH
Confidence            9999999875210                    0   0135889999999999999999999998888776 77788888


Q ss_pred             H-HhcCCCCCCEEEEEcC-CHHHHHHHHHHHHHCCCCeEEEEeCChhHHHHHHHcCCCEEEeCCCCcccHHHHHHHHHHH
Q 017868          174 C-RRANIGPETNVLIMGA-GPIGLVTMLGAPRAFGAPRIVIVDVDDYRLSVAKEIGADNIVKVSTNLQDIAEEVEKIQKA  251 (365)
Q Consensus       174 ~-~~~~~~~g~~vlI~G~-g~~G~~ai~~l~~~~g~~~vi~v~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~i~~~~~~  251 (365)
                      + +.+++++|++++|+|+ +.+|+++++ +++..|++ ++.++++ ++.++++++|++.+++..  .. +.+.+++..  
T Consensus       136 l~~~~~~~~~~~vli~g~~~~~g~~~~~-~a~~~g~~-v~~~~~~-~~~~~~~~~g~~~~~~~~--~~-~~~~~~~~~--  207 (326)
T cd08272         136 LVDRAAVQAGQTVLIHGGAGGVGHVAVQ-LAKAAGAR-VYATASS-EKAAFARSLGADPIIYYR--ET-VVEYVAEHT--  207 (326)
T ss_pred             HHHhcCCCCCCEEEEEcCCCcHHHHHHH-HHHHcCCE-EEEEech-HHHHHHHHcCCCEEEecc--hh-HHHHHHHhc--
Confidence            6 6788999999999985 999999999 99999995 6666666 888888889987766532  23 555565543  


Q ss_pred             hCCCceEEEeCCCCHHHHHHHHHhcccCCEEEEEccCCCCccccchHhhhcCcEEEeeccc------------CCcHHHH
Q 017868          252 MGTGIDVSFDCAGLNKTMSTALGATCAGGKVCLVGMGHHEMTVPLTPAAVREVDVVGVFRY------------KNTWPLC  319 (365)
Q Consensus       252 ~~~~~d~vid~~g~~~~~~~~~~~l~~~G~~~~~g~~~~~~~~~~~~~~~~~~~i~~~~~~------------~~~~~~~  319 (365)
                      .+.++|+++|++++. .....+++++++|+++.++... .  ........+++.+.+....            .+.+.++
T Consensus       208 ~~~~~d~v~~~~~~~-~~~~~~~~l~~~g~~v~~~~~~-~--~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  283 (326)
T cd08272         208 GGRGFDVVFDTVGGE-TLDASFEAVALYGRVVSILGGA-T--HDLAPLSFRNATYSGVFTLLPLLTGEGRAHHGEILREA  283 (326)
T ss_pred             CCCCCcEEEECCChH-HHHHHHHHhccCCEEEEEecCC-c--cchhhHhhhcceEEEEEcccccccccchhhHHHHHHHH
Confidence            256899999999975 6788999999999999987543 1  1222233566666654421            2357788


Q ss_pred             HHHHHcCCCCCCCceE-EEecCChhhHHHHHHHHhcCCCceEEEEeC
Q 017868          320 LELLRSGKIDVKPLVT-HRFGFSQKEVEEAFETSARGGTAIKVMFNL  365 (365)
Q Consensus       320 ~~~l~~g~~~~~~~~~-~~~~~~~~~~~~a~~~~~~~~~~gk~vi~~  365 (365)
                      +++++++.+.  +.+. +.|++  +++.++++.+.++...+|+++++
T Consensus       284 ~~~l~~~~l~--~~~~~~~~~~--~~~~~~~~~~~~~~~~~~vv~~~  326 (326)
T cd08272         284 ARLVERGQLR--PLLDPRTFPL--EEAAAAHARLESGSARGKIVIDV  326 (326)
T ss_pred             HHHHHCCCcc--cccccceecH--HHHHHHHHHHHcCCcccEEEEEC
Confidence            8999998883  4433 77788  99999999998888889999875

This group is a member of the medium chain dehydrogenases/reductase (MDR)/zinc-dependent alcohol dehydrogenase-like family, but lacks the zinc-binding sites of the zinc-dependent alcohol dehydrogenases. The medium chain dehydrogenases/reductase (MDR)/zinc-dependent alcohol dehydrogenase-like family, which contains the zinc-dependent alcohol dehydrogenase (ADH-Zn) and related proteins, is a diverse group of proteins related to the first identified member, class I mammalian ADH. MDRs display a broad range of activities and are distinguished from the smaller short chain dehydrogenases (~ 250 amino acids vs. the ~ 350 amino acids of the MDR). The MDR proteins have 2 domains: a C-terminal NAD(P)-binding Rossmann fold domain of a beta-alpha form and an N-terminal catalytic domain with distant homology to GroES. The MDR group contains a host of activities, including the founding alcoh

>cd08288 MDR_yhdh Yhdh putative quinone oxidoreductases

Probab=100.00  E-value=2.4e-31  Score=242.44  Aligned_cols=307  Identities=20%  Similarity=0.247  Sum_probs=234.8

Q ss_pred             ceeEEEecCC---ceEEEEecCCCCCCCcEEEEEeeeeeCcccHhhhhccccCCccCCCCcccCccceEEEEEeCCCCCC
Q 017868           18 NMAAWLLGVN---TLKIQPFELPSLGPYDVLVRMKAVGICGSDVHYLKTLRCADFVVKEPMVIGHECAGVIEKVGSEVKT   94 (365)
Q Consensus        18 ~~~~~~~~~~---~l~~~~~~~p~~~~~eVlI~v~~~~l~~~D~~~~~g~~~~~~~~~~p~~~G~e~~G~V~~vG~~v~~   94 (365)
                      |+++++.+++   .+++++.|.|+|+++||+|||.++++|+.|.....|....  ...+|.++|+|++|+|++  +++++
T Consensus         1 ~~a~~~~~~~~~~~~~~~~~~~p~~~~~~v~v~v~~~~i~~~d~~~~~g~~~~--~~~~~~~~g~e~~G~V~~--~~~~~   76 (324)
T cd08288           1 FKALVLEKDDGGTSAELRELDESDLPEGDVTVEVHYSTLNYKDGLAITGKGGI--VRTFPLVPGIDLAGTVVE--SSSPR   76 (324)
T ss_pred             CeeEEEeccCCCcceEEEECCCCCCCCCeEEEEEEEEecCHHHHHHhcCCccc--cCCCCCccccceEEEEEe--CCCCC
Confidence            5788887654   7999999999999999999999999999999887664211  123477899999999998  77788


Q ss_pred             CCCCCEEEEcCCcCCCCCccccCCCCCCCCCccccccCCCCcceeeEEeecCCceEECCCCCCcchhccch-hhHHHHHH
Q 017868           95 LVPGDRVALEPGISCWRCDHCKGGRYNLCPEMKFFATPPVHGSLANQVVHPADLCFKLPDNVSLEEGAMCE-PLSVGLHA  173 (365)
Q Consensus        95 ~~~Gd~V~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~v~~~~~~~iP~~~~~~~a~~~~-~~~~a~~~  173 (365)
                      +++||+|+++...-              +        ...+|+|++|++++.+.++++|+++++++++.++ .+.+|+.+
T Consensus        77 ~~~Gd~V~~~~~~~--------------~--------~~~~g~~~~~~~v~~~~~~~lp~~~~~~~~~~~~~~~~ta~~~  134 (324)
T cd08288          77 FKPGDRVVLTGWGV--------------G--------ERHWGGYAQRARVKADWLVPLPEGLSARQAMAIGTAGFTAMLC  134 (324)
T ss_pred             CCCCCEEEECCccC--------------C--------CCCCCcceeEEEEchHHeeeCCCCCCHHHHhhhhhHHHHHHHH
Confidence            99999998852100              0        0135899999999999999999999999888776 56667655


Q ss_pred             HH---hcCCC-CCCEEEEEcC-CHHHHHHHHHHHHHCCCCeEEEEeCChhHHHHHHHcCCCEEEeCCCCcccHHHHHHHH
Q 017868          174 CR---RANIG-PETNVLIMGA-GPIGLVTMLGAPRAFGAPRIVIVDVDDYRLSVAKEIGADNIVKVSTNLQDIAEEVEKI  248 (365)
Q Consensus       174 ~~---~~~~~-~g~~vlI~G~-g~~G~~ai~~l~~~~g~~~vi~v~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~i~~~  248 (365)
                      +.   ..... ++++|||+|+ |.+|++++| +++.+|++ ++++++++++.++++++|++.++++.+    +...++.+
T Consensus       135 ~~~~~~~~~~~~~~~vlI~ga~g~vg~~~~~-~A~~~G~~-vi~~~~~~~~~~~~~~~g~~~~~~~~~----~~~~~~~~  208 (324)
T cd08288         135 VMALEDHGVTPGDGPVLVTGAAGGVGSVAVA-LLARLGYE-VVASTGRPEEADYLRSLGASEIIDRAE----LSEPGRPL  208 (324)
T ss_pred             HHHHhhcCcCCCCCEEEEECCCcHHHHHHHH-HHHHCCCe-EEEEeCCHHHHHHHHhcCCCEEEEcch----hhHhhhhh
Confidence            43   44555 6789999997 999999999 99999995 777778889999999999988877532    22233333


Q ss_pred             HHHhCCCceEEEeCCCCHHHHHHHHHhcccCCEEEEEccCCC-CccccchHhhhcCcEEEeeccc-------CCcHHHHH
Q 017868          249 QKAMGTGIDVSFDCAGLNKTMSTALGATCAGGKVCLVGMGHH-EMTVPLTPAAVREVDVVGVFRY-------KNTWPLCL  320 (365)
Q Consensus       249 ~~~~~~~~d~vid~~g~~~~~~~~~~~l~~~G~~~~~g~~~~-~~~~~~~~~~~~~~~i~~~~~~-------~~~~~~~~  320 (365)
                         ...++|.++|+++.. .....+..++.+|+++.+|.... ........+..++.++.+....       .+.+..+.
T Consensus       209 ---~~~~~~~~~d~~~~~-~~~~~~~~~~~~g~~~~~G~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  284 (324)
T cd08288         209 ---QKERWAGAVDTVGGH-TLANVLAQTRYGGAVAACGLAGGADLPTTVMPFILRGVTLLGIDSVMAPIERRRAAWARLA  284 (324)
T ss_pred             ---ccCcccEEEECCcHH-HHHHHHHHhcCCCEEEEEEecCCCCCCcchhhhhccccEEEEEEeecccchhhHHHHHHHH
Confidence               245689999999963 66788888998899999885421 1123333344678888875421       23466777


Q ss_pred             HHHHcCCCCCCCceEEEecCChhhHHHHHHHHhcCCCceEEEEeC
Q 017868          321 ELLRSGKIDVKPLVTHRFGFSQKEVEEAFETSARGGTAIKVMFNL  365 (365)
Q Consensus       321 ~~l~~g~~~~~~~~~~~~~~~~~~~~~a~~~~~~~~~~gk~vi~~  365 (365)
                      +++.++.+  .+ +.+.+++  +++.+|++.+.+++..+|+++++
T Consensus       285 ~~~~~~~~--~~-i~~~~~~--~~~~~a~~~~~~~~~~~~vvv~~  324 (324)
T cd08288         285 RDLDPALL--EA-LTREIPL--ADVPDAAEAILAGQVRGRVVVDV  324 (324)
T ss_pred             HHHhcCCc--cc-cceeecH--HHHHHHHHHHhcCCccCeEEEeC
Confidence            88888877  33 3577888  99999999999999999999874

Yhdh putative quinone oxidoreductases (QOR). QOR catalyzes the conversion of a quinone + NAD(P)H to a hydroquinone + NAD(P)+. Quinones are cyclic diones derived from aromatic compounds. Membrane bound QOR actin the respiratory chains of bacteria and mitochondria, while soluble QOR acts to protect from toxic quinones (e.g. DT-diaphorase) or as a soluble eye-lens protein in some vertebrates (e.g. zeta-crystalin). QOR reduces quinones through a semi-quinone intermediate via a NAD(P)H-dependent single electron transfer. QOR is a member of the medium chain dehydrogenase/reductase family, but lacks the zinc-binding sites of the prototypical alcohol dehydrogenases of this group. NAD(P)(H)-dependent oxidoreductases are the major enzymes in the interconversion of alcohols and aldehydes, or ketones. Alcohol dehydrogenase in the liver converts ethanol and NAD+ to acetaldehyde and NADH, while in yeast and some other microorganisms ADH catal

>cd08247 AST1_like AST1 is a cytoplasmic protein associated with the periplasmic membrane in yeast

Probab=100.00  E-value=2.5e-31  Score=245.10  Aligned_cols=315  Identities=19%  Similarity=0.260  Sum_probs=228.4

Q ss_pred             eeEEEecC-CceEEEEecCCCC---CCCcEEEEEeeeeeCcccHhhhhccccCCccCCCCcccCccceEEEEEeCCCCC-
Q 017868           19 MAAWLLGV-NTLKIQPFELPSL---GPYDVLVRMKAVGICGSDVHYLKTLRCADFVVKEPMVIGHECAGVIEKVGSEVK-   93 (365)
Q Consensus        19 ~~~~~~~~-~~l~~~~~~~p~~---~~~eVlI~v~~~~l~~~D~~~~~g~~~~~~~~~~p~~~G~e~~G~V~~vG~~v~-   93 (365)
                      +++++.++ +.++++.++.|.|   .+++|+|||.++++|+.|+....+.. .. ....|.++|+|++|+|+++|++++ 
T Consensus         2 ~~~~~~~~~~~~~~~~~~~~~p~~~~~~~v~I~v~~~~~~~~d~~~~~~~~-~~-~~~~~~~~g~e~~G~V~~vG~~v~~   79 (352)
T cd08247           2 KALTFKNNTSPLTITTIKLPLPNCYKDNEIVVKVHAAALNPVDLKLYNSYT-FH-FKVKEKGLGRDYSGVIVKVGSNVAS   79 (352)
T ss_pred             ceEEEecCCCcceeeccCCCCCCCCCCCeEEEEEEEEecChHhHHHhcccc-cc-cccCCCccCceeEEEEEEeCccccc
Confidence            45666654 4566665555554   89999999999999999988765311 11 111377899999999999999998 


Q ss_pred             CCCCCCEEEEcCCcCCCCCccccCCCCCCCCCccccccCCCCcceeeEEeecCC----ceEECCCCCCcchhccch-hhH
Q 017868           94 TLVPGDRVALEPGISCWRCDHCKGGRYNLCPEMKFFATPPVHGSLANQVVHPAD----LCFKLPDNVSLEEGAMCE-PLS  168 (365)
Q Consensus        94 ~~~~Gd~V~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~v~~~----~~~~iP~~~~~~~a~~~~-~~~  168 (365)
                      .|++||+|++.....|                       ...|+|++|+++++.    .++++|+++++++++.++ .+.
T Consensus        80 ~~~~Gd~V~~~~~~~~-----------------------~~~g~~~~~~~v~~~~~~~~~~~lP~~l~~~~aa~~~~~~~  136 (352)
T cd08247          80 EWKVGDEVCGIYPHPY-----------------------GGQGTLSQYLLVDPKKDKKSITRKPENISLEEAAAWPLVLG  136 (352)
T ss_pred             CCCCCCEEEEeecCCC-----------------------CCCceeeEEEEEccccccceeEECCCCCCHHHHHHhHHHHH
Confidence            8999999988633211                       135899999999987    789999999999998886 677


Q ss_pred             HHHHHHHh-c-CCCCCCEEEEEcC-CHHHHHHHHHHHHHCC-CCeEEEEeCChhHHHHHHHcCCCEEEeCCCCcc-cHHH
Q 017868          169 VGLHACRR-A-NIGPETNVLIMGA-GPIGLVTMLGAPRAFG-APRIVIVDVDDYRLSVAKEIGADNIVKVSTNLQ-DIAE  243 (365)
Q Consensus       169 ~a~~~~~~-~-~~~~g~~vlI~G~-g~~G~~ai~~l~~~~g-~~~vi~v~~~~~~~~~~~~~g~~~~~~~~~~~~-~~~~  243 (365)
                      +||+++.. . ++++|++|||+|+ +.+|+++++ +++..| .++++++.+ +++.+.++++|++.+++..+... .+..
T Consensus       137 ta~~~l~~~~~~~~~g~~vlI~ga~~~vg~~~~~-~a~~~~~~~~v~~~~~-~~~~~~~~~~g~~~~i~~~~~~~~~~~~  214 (352)
T cd08247         137 TAYQILEDLGQKLGPDSKVLVLGGSTSVGRFAIQ-LAKNHYNIGTVVGTCS-SRSAELNKKLGADHFIDYDAHSGVKLLK  214 (352)
T ss_pred             HHHHHHHHhhhccCCCCeEEEECCCchHHHHHHH-HHHhcCCcceEEEEeC-hhHHHHHHHhCCCEEEecCCCcccchHH
Confidence            89998855 4 6999999999987 799999999 888874 435677654 55556778999988777543211 0323


Q ss_pred             HHHHHHHHhCCCceEEEeCCCCHHHHHHHHHhcc---cCCEEEEEc-cCCCCcc---------------ccchHhhhcCc
Q 017868          244 EVEKIQKAMGTGIDVSFDCAGLNKTMSTALGATC---AGGKVCLVG-MGHHEMT---------------VPLTPAAVREV  304 (365)
Q Consensus       244 ~i~~~~~~~~~~~d~vid~~g~~~~~~~~~~~l~---~~G~~~~~g-~~~~~~~---------------~~~~~~~~~~~  304 (365)
                      .+.+.. ..++++|++|||+|........+++++   ++|+++.++ ....+..               .......+...
T Consensus       215 ~~~~~~-~~~~~~d~vl~~~g~~~~~~~~~~~l~~~~~~G~~v~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  293 (352)
T cd08247         215 PVLENV-KGQGKFDLILDCVGGYDLFPHINSILKPKSKNGHYVTIVGDYKANYKKDTFNSWDNPSANARKLFGSLGLWSY  293 (352)
T ss_pred             HHHHhh-cCCCCceEEEECCCCHHHHHHHHHHhCccCCCCEEEEEeCCCcccccchhhhhccccchhhhhhhhhhcCCCc
Confidence            332221 115789999999998667788999999   999999874 2111100               01112223444


Q ss_pred             EEEeeccc--CCcHHHHHHHHHcCCCCCCCceEEEecCChhhHHHHHHHHhcCCCceEEEEeC
Q 017868          305 DVVGVFRY--KNTWPLCLELLRSGKIDVKPLVTHRFGFSQKEVEEAFETSARGGTAIKVMFNL  365 (365)
Q Consensus       305 ~i~~~~~~--~~~~~~~~~~l~~g~~~~~~~~~~~~~~~~~~~~~a~~~~~~~~~~gk~vi~~  365 (365)
                      ++......  .+.+.++++++.++.+  .+...+.+++  +++++|++.++++...||+++++
T Consensus       294 ~~~~~~~~~~~~~~~~~~~~~~~~~l--~~~~~~~~~l--~~~~~a~~~~~~~~~~gkvvi~~  352 (352)
T cd08247         294 NYQFFLLDPNADWIEKCAELIADGKV--KPPIDSVYPF--EDYKEAFERLKSNRAKGKVVIKV  352 (352)
T ss_pred             ceEEEEecCCHHHHHHHHHHHhCCCe--EeeeccEecH--HHHHHHHHHHHcCCCCCcEEEeC
Confidence            43332211  2467889999999988  4456678888  99999999999998899999874

This group contains members identified in targeting of yeast membrane proteins ATPase. AST1 is a cytoplasmic protein associated with the periplasmic membrane in yeast, identified as a multicopy suppressor of pma1 mutants which cause temperature sensitive growth arrest due to the inability of ATPase to target to the cell surface. This family is homologous to the medium chain family of dehydrogenases and reductases. Medium chain dehydrogenases/reductase (MDR)/zinc-dependent alcohol dehydrogenase-like family, which contains the zinc-dependent alcohol dehydrogenase (ADH-Zn) and related proteins, is a diverse group of proteins related to the first identified member, class I mammalian ADH. MDRs display a broad range of activities and are distinguished from the smaller short chain dehydrogenases (~ 250 amino acids vs. the ~ 350 amino acids of the MDR). The MDR proteins have 2 domains: a C-termi

>cd05288 PGDH Prostaglandin dehydrogenases

Probab=100.00  E-value=2.2e-31  Score=243.15  Aligned_cols=292  Identities=20%  Similarity=0.200  Sum_probs=226.3

Q ss_pred             CceEEEEecCCCCCCCcEEEEEeeeeeCcccHhhhhccccCCccCCCCcccCccceEEEEEeCCCCCCCCCCCEEEEcCC
Q 017868           27 NTLKIQPFELPSLGPYDVLVRMKAVGICGSDVHYLKTLRCADFVVKEPMVIGHECAGVIEKVGSEVKTLVPGDRVALEPG  106 (365)
Q Consensus        27 ~~l~~~~~~~p~~~~~eVlI~v~~~~l~~~D~~~~~g~~~~~~~~~~p~~~G~e~~G~V~~vG~~v~~~~~Gd~V~~~~~  106 (365)
                      +.+++.+.|.|++.++||+|||.++++|+.|.....+...-..+...+.++|+|++|+|+++|++  +|++||+|+.+  
T Consensus        18 ~~~~~~~~~~p~~~~~~v~Vkv~~~~i~~~~~~~~~~~~~~~~~~~~~~~~g~e~~G~V~~~G~~--~~~~Gd~V~~~--   93 (329)
T cd05288          18 DDFELVEVPLPELKDGEVLVRTLYLSVDPYMRGWMSDAKSYSPPVQLGEPMRGGGVGEVVESRSP--DFKVGDLVSGF--   93 (329)
T ss_pred             cceeEEeccCCCCCCCeEEEEEEEEecCHHHhhhhccCcccCCCccCCCcccCceEEEEEecCCC--CCCCCCEEecc--
Confidence            57999999999999999999999999999876555442110111122457899999999999964  79999999764  


Q ss_pred             cCCCCCccccCCCCCCCCCccccccCCCCcceeeEEeecC-CceEECCCCCC--cchhcc-c-hhhHHHHHHHH-hcCCC
Q 017868          107 ISCWRCDHCKGGRYNLCPEMKFFATPPVHGSLANQVVHPA-DLCFKLPDNVS--LEEGAM-C-EPLSVGLHACR-RANIG  180 (365)
Q Consensus       107 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~v~~-~~~~~iP~~~~--~~~a~~-~-~~~~~a~~~~~-~~~~~  180 (365)
                                                   ++|++|+.+++ +.++++|++++  +.+++. + .++.+|++++. .+.+.
T Consensus        94 -----------------------------~~~~~~~~v~~~~~~~~lP~~~~~~~~~~~~~l~~~~~ta~~~l~~~~~~~  144 (329)
T cd05288          94 -----------------------------LGWQEYAVVDGASGLRKLDPSLGLPLSAYLGVLGMTGLTAYFGLTEIGKPK  144 (329)
T ss_pred             -----------------------------cceEEEEEecchhhcEECCcccCCCHHHHHHhcccHHHHHHHHHHhccCCC
Confidence                                         58999999999 99999999985  444433 4 47889999884 57789


Q ss_pred             CCCEEEEEcC-CHHHHHHHHHHHHHCCCCeEEEEeCChhHHHHHHH-cCCCEEEeCCCCcccHHHHHHHHHHHhCCCceE
Q 017868          181 PETNVLIMGA-GPIGLVTMLGAPRAFGAPRIVIVDVDDYRLSVAKE-IGADNIVKVSTNLQDIAEEVEKIQKAMGTGIDV  258 (365)
Q Consensus       181 ~g~~vlI~G~-g~~G~~ai~~l~~~~g~~~vi~v~~~~~~~~~~~~-~g~~~~~~~~~~~~~~~~~i~~~~~~~~~~~d~  258 (365)
                      ++++|||+|+ |.+|+++++ +++..|+ .++++++++++.+.+++ +|++.++++..  .++...+.+..   ++++|+
T Consensus       145 ~~~~vlI~g~~g~ig~~~~~-~a~~~G~-~vi~~~~~~~~~~~~~~~~g~~~~~~~~~--~~~~~~v~~~~---~~~~d~  217 (329)
T cd05288         145 PGETVVVSAAAGAVGSVVGQ-IAKLLGA-RVVGIAGSDEKCRWLVEELGFDAAINYKT--PDLAEALKEAA---PDGIDV  217 (329)
T ss_pred             CCCEEEEecCcchHHHHHHH-HHHHcCC-EEEEEeCCHHHHHHHHhhcCCceEEecCC--hhHHHHHHHhc---cCCceE
Confidence            9999999985 999999999 9999999 57788888889998888 99988777543  45655555543   468999


Q ss_pred             EEeCCCCHHHHHHHHHhcccCCEEEEEccCCCCcc------ccchHhhhcCcEEEeeccc------CCcHHHHHHHHHcC
Q 017868          259 SFDCAGLNKTMSTALGATCAGGKVCLVGMGHHEMT------VPLTPAAVREVDVVGVFRY------KNTWPLCLELLRSG  326 (365)
Q Consensus       259 vid~~g~~~~~~~~~~~l~~~G~~~~~g~~~~~~~------~~~~~~~~~~~~i~~~~~~------~~~~~~~~~~l~~g  326 (365)
                      +||++|. ..+..++++++++|+++.+|.......      .+......++.++.+....      .+.+.+++++++++
T Consensus       218 vi~~~g~-~~~~~~~~~l~~~G~~v~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g  296 (329)
T cd05288         218 YFDNVGG-EILDAALTLLNKGGRIALCGAISQYNATEPPGPKNLGNIITKRLTMQGFIVSDYADRFPEALAELAKWLAEG  296 (329)
T ss_pred             EEEcchH-HHHHHHHHhcCCCceEEEEeeccCcccccccccccHHHHhhCcceEEeecchhhHHHHHHHHHHHHHHHHCC
Confidence            9999996 478899999999999999975432211      1233355677887776533      24578889999999


Q ss_pred             CCCCCCceEEEecCChhhHHHHHHHHhcCCCceEEEE
Q 017868          327 KIDVKPLVTHRFGFSQKEVEEAFETSARGGTAIKVMF  363 (365)
Q Consensus       327 ~~~~~~~~~~~~~~~~~~~~~a~~~~~~~~~~gk~vi  363 (365)
                      .+...  ....+++  +++.++++.+.+++..+|+++
T Consensus       297 ~i~~~--~~~~~~l--~~~~~a~~~~~~~~~~gkvvv  329 (329)
T cd05288         297 KLKYR--EDVVEGL--ENAPEAFLGLFTGKNTGKLVV  329 (329)
T ss_pred             Ccccc--ccccccH--HHHHHHHHHHhcCCCccceeC
Confidence            98543  3344667  999999999998888888874

Prostaglandins and related eicosanoids are metabolized by the oxidation of the 15(S)-hydroxyl group of the NAD+-dependent (type I 15-PGDH) 15-prostaglandin dehydrogenase (15-PGDH) followed by reduction by NADPH/NADH-dependent (type II 15-PGDH) delta-13 15-prostaglandin reductase (13-PGR) to 15-keto-13,14,-dihydroprostaglandins. 13-PGR is a bifunctional enzyme, since it also has leukotriene B(4) 12-hydroxydehydrogenase activity. These 15-PGDH and related enzymes are members of the medium chain dehydrogenase/reductase family. The medium chain dehydrogenases/reductase (MDR)/zinc-dependent alcohol dehydrogenase-like family, which contains the zinc-dependent alcohol dehydrogenase (ADH-Zn) and related proteins, is a diverse group of proteins related to the first identified member, class I mammalian ADH. MDRs display a broad range of activities and are distinguished from the smaller short chain dehydrogenases (~ 250 amino acids vs. the ~ 350 amino

>cd08271 MDR5 Medium chain dehydrogenases/reductase (MDR)/zinc-dependent alcohol dehydrogenase-like family

Probab=100.00  E-value=3.6e-31  Score=241.22  Aligned_cols=308  Identities=26%  Similarity=0.341  Sum_probs=239.5

Q ss_pred             ceeEEEecCC---ceEEEEecCCCCCCCcEEEEEeeeeeCcccHhhhhccccCCccCCCCcccCccceEEEEEeCCCCCC
Q 017868           18 NMAAWLLGVN---TLKIQPFELPSLGPYDVLVRMKAVGICGSDVHYLKTLRCADFVVKEPMVIGHECAGVIEKVGSEVKT   94 (365)
Q Consensus        18 ~~~~~~~~~~---~l~~~~~~~p~~~~~eVlI~v~~~~l~~~D~~~~~g~~~~~~~~~~p~~~G~e~~G~V~~vG~~v~~   94 (365)
                      |+++++.+++   .+++.+.|.|++.+++|+|||.++++|+.|+....+....   ...|.++|||++|+|+.+|++++.
T Consensus         1 ~~a~~~~~~~~~~~~~~~~~~~~~~~~~~v~v~v~~~~i~~~d~~~~~~~~~~---~~~~~~~g~e~~G~v~~~G~~~~~   77 (325)
T cd08271           1 MKAWVLPKPGAALQLTLEEIEIPGPGAGEVLVKVHAAGLNPVDWKVIAWGPPA---WSYPHVPGVDGAGVVVAVGAKVTG   77 (325)
T ss_pred             CeeEEEccCCCcceeEEeccCCCCCCCCEEEEEEEEEecCHHHHHHhcCCCCC---CCCCcccccceEEEEEEeCCCCCc
Confidence            6788888877   8999999999999999999999999999999887654311   123678999999999999999999


Q ss_pred             CCCCCEEEEcCCcCCCCCccccCCCCCCCCCccccccCCCCcceeeEEeecCCceEECCCCCCcchhccch-hhHHHHHH
Q 017868           95 LVPGDRVALEPGISCWRCDHCKGGRYNLCPEMKFFATPPVHGSLANQVVHPADLCFKLPDNVSLEEGAMCE-PLSVGLHA  173 (365)
Q Consensus        95 ~~~Gd~V~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~v~~~~~~~iP~~~~~~~a~~~~-~~~~a~~~  173 (365)
                      +++||+|++....                         ...|+|++|+.++.+.++++|+++++.+++.+. .+.+|+++
T Consensus        78 ~~~Gd~V~~~~~~-------------------------~~~~~~~s~~~~~~~~~~~ip~~~~~~~~a~~~~~~~~a~~~  132 (325)
T cd08271          78 WKVGDRVAYHASL-------------------------ARGGSFAEYTVVDARAVLPLPDSLSFEEAAALPCAGLTAYQA  132 (325)
T ss_pred             CCCCCEEEeccCC-------------------------CCCccceeEEEeCHHHeEECCCCCCHHHHHhhhhhHHHHHHH
Confidence            9999999875210                         135899999999999999999999998888765 78889998


Q ss_pred             H-HhcCCCCCCEEEEEcC-CHHHHHHHHHHHHHCCCCeEEEEeCChhHHHHHHHcCCCEEEeCCCCcccHHHHHHHHHHH
Q 017868          174 C-RRANIGPETNVLIMGA-GPIGLVTMLGAPRAFGAPRIVIVDVDDYRLSVAKEIGADNIVKVSTNLQDIAEEVEKIQKA  251 (365)
Q Consensus       174 ~-~~~~~~~g~~vlI~G~-g~~G~~ai~~l~~~~g~~~vi~v~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~i~~~~~~  251 (365)
                      + +.+++++|++++|+|+ +.+|+++++ +++..|++ ++.+. ++++.+.+.++|++.+++.  ...++...+++..  
T Consensus       133 ~~~~~~~~~g~~vlI~g~~~~ig~~~~~-~a~~~g~~-v~~~~-~~~~~~~~~~~g~~~~~~~--~~~~~~~~~~~~~--  205 (325)
T cd08271         133 LFKKLRIEAGRTILITGGAGGVGSFAVQ-LAKRAGLR-VITTC-SKRNFEYVKSLGADHVIDY--NDEDVCERIKEIT--  205 (325)
T ss_pred             HHHhcCCCCCCEEEEECCccHHHHHHHH-HHHHcCCE-EEEEE-cHHHHHHHHHcCCcEEecC--CCccHHHHHHHHc--
Confidence            8 4578899999999998 889999999 99999995 55554 6677788888998776653  3345555565543  


Q ss_pred             hCCCceEEEeCCCCHHHHHHHHHhcccCCEEEEEccCCCC--ccccchHhhhcCcEEEeeccc---------CCcHHHHH
Q 017868          252 MGTGIDVSFDCAGLNKTMSTALGATCAGGKVCLVGMGHHE--MTVPLTPAAVREVDVVGVFRY---------KNTWPLCL  320 (365)
Q Consensus       252 ~~~~~d~vid~~g~~~~~~~~~~~l~~~G~~~~~g~~~~~--~~~~~~~~~~~~~~i~~~~~~---------~~~~~~~~  320 (365)
                      .+.++|++++++++. .....+++++++|+++.++.....  .........++.+++......         .+.+.+++
T Consensus       206 ~~~~~d~vi~~~~~~-~~~~~~~~l~~~G~~v~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  284 (325)
T cd08271         206 GGRGVDAVLDTVGGE-TAAALAPTLAFNGHLVCIQGRPDASPDPPFTRALSVHEVALGAAHDHGDPAAWQDLRYAGEELL  284 (325)
T ss_pred             CCCCCcEEEECCCcH-hHHHHHHhhccCCEEEEEcCCCCCcchhHHhhcceEEEEEecccccccchhhHHHHHHHHHHHH
Confidence            256899999999976 556789999999999988643221  111112233444444443221         23457788


Q ss_pred             HHHHcCCCCCCCceEEEecCChhhHHHHHHHHhcCCCceEEEEeC
Q 017868          321 ELLRSGKIDVKPLVTHRFGFSQKEVEEAFETSARGGTAIKVMFNL  365 (365)
Q Consensus       321 ~~l~~g~~~~~~~~~~~~~~~~~~~~~a~~~~~~~~~~gk~vi~~  365 (365)
                      ++++++.+.  +...+.|++  +++.++++.+.++...+|+++++
T Consensus       285 ~~~~~~~i~--~~~~~~~~~--~~~~~a~~~~~~~~~~~kiv~~~  325 (325)
T cd08271         285 ELLAAGKLE--PLVIEVLPF--EQLPEALRALKDRHTRGKIVVTI  325 (325)
T ss_pred             HHHHCCCee--eccceEEcH--HHHHHHHHHHHcCCccceEEEEC
Confidence            999999883  445677777  99999999999888899999874

This group is a member of the medium chain dehydrogenases/reductase (MDR)/zinc-dependent alcohol dehydrogenase-like family, but lacks the zinc-binding sites of the zinc-dependent alcohol dehydrogenases. The medium chain dehydrogenases/reductase (MDR)/zinc-dependent alcohol dehydrogenase-like family, which contains the zinc-dependent alcohol dehydrogenase (ADH-Zn) and related proteins, is a diverse group of proteins related to the first identified member, class I mammalian ADH. MDRs display a broad range of activities and are distinguished from the smaller short chain dehydrogenases (~ 250 amino acids vs. the ~ 350 amino acids of the MDR). The MDR proteins have 2 domains: a C-terminal NAD(P)-binding Rossmann fold domain of a beta-alpha form and an N-terminal catalytic domain with distant homology to GroES. The MDR group contains a host of activities, including the founding alcoh

>cd05188 MDR Medium chain reductase/dehydrogenase (MDR)/zinc-dependent alcohol dehydrogenase-like family

Probab=100.00  E-value=2.5e-31  Score=235.79  Aligned_cols=266  Identities=36%  Similarity=0.619  Sum_probs=216.6

Q ss_pred             cEEEEEeeeeeCcccHhhhhccccCCccCCCCcccCccceEEEEEeCCCCCCCCCCCEEEEcCCcCCCCCccccCCCCCC
Q 017868           43 DVLVRMKAVGICGSDVHYLKTLRCADFVVKEPMVIGHECAGVIEKVGSEVKTLVPGDRVALEPGISCWRCDHCKGGRYNL  122 (365)
Q Consensus        43 eVlI~v~~~~l~~~D~~~~~g~~~~~~~~~~p~~~G~e~~G~V~~vG~~v~~~~~Gd~V~~~~~~~~~~~~~~~~~~~~~  122 (365)
                      ||+|+|.++++|+.|+....|...  ....+|.++|+|++|+|+++|++++.|++||+|++.+..+|++|++|+.    .
T Consensus         1 ~v~i~v~~~~i~~~d~~~~~g~~~--~~~~~~~~~G~e~~G~v~~~G~~v~~~~~Gd~V~~~~~~~~~~~~~~~~----~   74 (271)
T cd05188           1 EVLVRVEAAGLCGTDLHIRRGGYP--PPPKLPLILGHEGAGVVVEVGPGVTGVKVGDRVVVLPNLGCGTCELCRE----L   74 (271)
T ss_pred             CeEEEEEEEEecchhHHHHcCCCC--cCCCCCcccccccEEEEEEECCCCCcCCCCCEEEEcCCCCCCCCHHHHh----h
Confidence            689999999999999998877542  1235578999999999999999999999999999999999999999997    6


Q ss_pred             CCCccccccCCCCcceeeEEeecCCceEECCCCCCcchhccch-hhHHHHHHHHh-cCCCCCCEEEEEcCCHHHHHHHHH
Q 017868          123 CPEMKFFATPPVHGSLANQVVHPADLCFKLPDNVSLEEGAMCE-PLSVGLHACRR-ANIGPETNVLIMGAGPIGLVTMLG  200 (365)
Q Consensus       123 ~~~~~~~~~~~~~g~~~~~~~v~~~~~~~iP~~~~~~~a~~~~-~~~~a~~~~~~-~~~~~g~~vlI~G~g~~G~~ai~~  200 (365)
                      |+...+.+. ...|+|++|+.++.+.++++|+++++++++.++ ++.+|+++++. ..++++++|||+|++++|+++++ 
T Consensus        75 ~~~~~~~~~-~~~g~~~~~~~v~~~~~~~ip~~~~~~~a~~~~~~~~~a~~~l~~~~~~~~~~~vli~g~~~~G~~~~~-  152 (271)
T cd05188          75 CPGGGILGE-GLDGGFAEYVVVPADNLVPLPDGLSLEEAALLPEPLATAYHALRRAGVLKPGDTVLVLGAGGVGLLAAQ-  152 (271)
T ss_pred             CCCCCEecc-ccCCcceEEEEechHHeEECCCCCCHHHhhHhcCHHHHHHHHHHhccCCCCCCEEEEECCCHHHHHHHH-
Confidence            776655443 457999999999999999999999999999885 89999999865 55689999999998669999999 


Q ss_pred             HHHHCCCCeEEEEeCChhHHHHHHHcCCCEEEeCCCCcccHHHHHHHHHHHhCCCceEEEeCCCCHHHHHHHHHhcccCC
Q 017868          201 APRAFGAPRIVIVDVDDYRLSVAKEIGADNIVKVSTNLQDIAEEVEKIQKAMGTGIDVSFDCAGLNKTMSTALGATCAGG  280 (365)
Q Consensus       201 l~~~~g~~~vi~v~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~i~~~~~~~~~~~d~vid~~g~~~~~~~~~~~l~~~G  280 (365)
                      +++..|. +++++++++++.+.++++|++.+++..  ..++...+.   ...+.++|+++++++........+++++++|
T Consensus       153 ~a~~~g~-~v~~~~~~~~~~~~~~~~g~~~~~~~~--~~~~~~~~~---~~~~~~~d~vi~~~~~~~~~~~~~~~l~~~G  226 (271)
T cd05188         153 LAKAAGA-RVIVTDRSDEKLELAKELGADHVIDYK--EEDLEEELR---LTGGGGADVVIDAVGGPETLAQALRLLRPGG  226 (271)
T ss_pred             HHHHcCC-eEEEEcCCHHHHHHHHHhCCceeccCC--cCCHHHHHH---HhcCCCCCEEEECCCCHHHHHHHHHhcccCC
Confidence            9999997 678888888999999999987766543  345545444   2336789999999998557888999999999


Q ss_pred             EEEEEccCCCCccc-cchHhhhcCcEEEeeccc-CCcHHHHHHH
Q 017868          281 KVCLVGMGHHEMTV-PLTPAAVREVDVVGVFRY-KNTWPLCLEL  322 (365)
Q Consensus       281 ~~~~~g~~~~~~~~-~~~~~~~~~~~i~~~~~~-~~~~~~~~~~  322 (365)
                      +++.++........ .....+.+++++.++..+ ..++++++++
T Consensus       227 ~~v~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  270 (271)
T cd05188         227 RIVVVGGTSGGPPLDDLRRLLFKELTIIGSTGGTREDFEEALDL  270 (271)
T ss_pred             EEEEEccCCCCCCcccHHHHHhcceEEEEeecCCHHHHHHHHhh
Confidence            99999865432222 234467788999888765 4466666655

The medium chain reductase/dehydrogenases (MDR)/zinc-dependent alcohol dehydrogenase-like family, which contains the zinc-dependent alcohol dehydrogenase (ADH-Zn) and related proteins, is a diverse group of proteins related to the first identified member, class I mammalian ADH. MDRs display a broad range of activities and are distinguished from the smaller short chain dehydrogenases (~ 250 amino acids vs. the ~ 350 amino acids of the MDR). The MDR proteins have 2 domains: a C-terminal NAD(P) binding-Rossmann fold domain of a beta-alpha form and an N-terminal catalytic domain with distant homology to GroES. The MDR group contains a host of activities, including the founding alcohol dehydrogenase (ADH) , quinone reductase, sorbitol dehydrogenase, formaldehyde dehydrogenase, butanediol DH, ketose reductase, cinnamyl reductase, and numerous others. The zinc-dependent alcohol dehydro

>cd05286 QOR2 Quinone oxidoreductase (QOR)

Probab=100.00  E-value=1.4e-30  Score=236.41  Aligned_cols=296  Identities=26%  Similarity=0.333  Sum_probs=234.7

Q ss_pred             CceEEEEecCCCCCCCcEEEEEeeeeeCcccHhhhhccccCCccCCCCcccCccceEEEEEeCCCCCCCCCCCEEEEcCC
Q 017868           27 NTLKIQPFELPSLGPYDVLVRMKAVGICGSDVHYLKTLRCADFVVKEPMVIGHECAGVIEKVGSEVKTLVPGDRVALEPG  106 (365)
Q Consensus        27 ~~l~~~~~~~p~~~~~eVlI~v~~~~l~~~D~~~~~g~~~~~~~~~~p~~~G~e~~G~V~~vG~~v~~~~~Gd~V~~~~~  106 (365)
                      ..+.+.+.+.|.+.++||+|+|.++++|+.|+....+...    ..+|.++|+|++|+|+.+|++++++++||+|+++. 
T Consensus        12 ~~~~~~~~~~~~~~~~~v~i~v~~~~i~~~d~~~~~~~~~----~~~~~~~g~e~~G~v~~~g~~~~~~~~G~~V~~~~-   86 (320)
T cd05286          12 EVLEYEDVPVPEPGPGEVLVRNTAIGVNFIDTYFRSGLYP----LPLPFVLGVEGAGVVEAVGPGVTGFKVGDRVAYAG-   86 (320)
T ss_pred             cceEEeecCCCCCCCCEEEEEEEEeecCHHHHHHhcCCCC----CCCCccCCcceeEEEEEECCCCCCCCCCCEEEEec-
Confidence            3567778888788999999999999999999988765432    24467899999999999999999999999998751 


Q ss_pred             cCCCCCccccCCCCCCCCCccccccCCCCcceeeEEeecCCceEECCCCCCcchhccch-hhHHHHHHH-HhcCCCCCCE
Q 017868          107 ISCWRCDHCKGGRYNLCPEMKFFATPPVHGSLANQVVHPADLCFKLPDNVSLEEGAMCE-PLSVGLHAC-RRANIGPETN  184 (365)
Q Consensus       107 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~v~~~~~~~iP~~~~~~~a~~~~-~~~~a~~~~-~~~~~~~g~~  184 (365)
                                                 ..|+|++|+.++.+.++++|+++++.+++.++ ...++++++ +.+++.+|++
T Consensus        87 ---------------------------~~g~~~~~~~~~~~~~~~~p~~~~~~~~~~~~~~~~~a~~~l~~~~~~~~g~~  139 (320)
T cd05286          87 ---------------------------PPGAYAEYRVVPASRLVKLPDGISDETAAALLLQGLTAHYLLRETYPVKPGDT  139 (320)
T ss_pred             ---------------------------CCCceeEEEEecHHHceeCCCCCCHHHHhhccchHHHHHHHHHHhcCCCCCCE
Confidence                                       14889999999999999999999998888765 777888887 4588999999


Q ss_pred             EEEEcC-CHHHHHHHHHHHHHCCCCeEEEEeCChhHHHHHHHcCCCEEEeCCCCcccHHHHHHHHHHHhCCCceEEEeCC
Q 017868          185 VLIMGA-GPIGLVTMLGAPRAFGAPRIVIVDVDDYRLSVAKEIGADNIVKVSTNLQDIAEEVEKIQKAMGTGIDVSFDCA  263 (365)
Q Consensus       185 vlI~G~-g~~G~~ai~~l~~~~g~~~vi~v~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~i~~~~~~~~~~~d~vid~~  263 (365)
                      |||+|+ |++|+++++ +++.+|+ .+++++.++++.+.++++|++.+++..  ..++.+.++.+.  .+.++|++++|+
T Consensus       140 vlI~g~~g~~g~~~~~-~a~~~g~-~v~~~~~~~~~~~~~~~~g~~~~~~~~--~~~~~~~~~~~~--~~~~~d~vl~~~  213 (320)
T cd05286         140 VLVHAAAGGVGLLLTQ-WAKALGA-TVIGTVSSEEKAELARAAGADHVINYR--DEDFVERVREIT--GGRGVDVVYDGV  213 (320)
T ss_pred             EEEEcCCchHHHHHHH-HHHHcCC-EEEEEcCCHHHHHHHHHCCCCEEEeCC--chhHHHHHHHHc--CCCCeeEEEECC
Confidence            999996 999999999 9999999 477777888999999999998776532  345656665543  256899999999


Q ss_pred             CCHHHHHHHHHhcccCCEEEEEccCCCCc-cccchHhhhcCcEEEeecc----c-----CCcHHHHHHHHHcCCCCCCCc
Q 017868          264 GLNKTMSTALGATCAGGKVCLVGMGHHEM-TVPLTPAAVREVDVVGVFR----Y-----KNTWPLCLELLRSGKIDVKPL  333 (365)
Q Consensus       264 g~~~~~~~~~~~l~~~G~~~~~g~~~~~~-~~~~~~~~~~~~~i~~~~~----~-----~~~~~~~~~~l~~g~~~~~~~  333 (365)
                      ++. .....+++++++|+++.+|...... .+....+..+++++.+...    .     .+.+.+++++++++.+.  +.
T Consensus       214 ~~~-~~~~~~~~l~~~g~~v~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~--~~  290 (320)
T cd05286         214 GKD-TFEGSLDSLRPRGTLVSFGNASGPVPPFDLLRLSKGSLFLTRPSLFHYIATREELLARAAELFDAVASGKLK--VE  290 (320)
T ss_pred             CcH-hHHHHHHhhccCcEEEEEecCCCCCCccCHHHHHhcCcEEEEEehhhhcCCHHHHHHHHHHHHHHHHCCCCc--Cc
Confidence            974 7889999999999999998543321 1222223356666654321    1     23456788999998884  33


Q ss_pred             eEEEecCChhhHHHHHHHHhcCCCceEEEEeC
Q 017868          334 VTHRFGFSQKEVEEAFETSARGGTAIKVMFNL  365 (365)
Q Consensus       334 ~~~~~~~~~~~~~~a~~~~~~~~~~gk~vi~~  365 (365)
                      ..+.|++  +++.+|++.+.++...+|++++.
T Consensus       291 ~~~~~~~--~~~~~a~~~~~~~~~~~~vv~~~  320 (320)
T cd05286         291 IGKRYPL--ADAAQAHRDLESRKTTGKLLLIP  320 (320)
T ss_pred             ccceEcH--HHHHHHHHHHHcCCCCceEEEeC
Confidence            5677777  99999999999988889999863

Quinone oxidoreductase (QOR) and 2-haloacrylate reductase. QOR catalyzes the conversion of a quinone + NAD(P)H to a hydroquinone + NAD(P)+. Quinones are cyclic diones derived from aromatic compounds. Membrane bound QOR actin the respiratory chains of bacteria and mitochondria, while soluble QOR acts to protect from toxic quinones (e.g. DT-diaphorase) or as a soluble eye-lens protein in some vertebrates (e.g. zeta-crystalin). QOR reduces quinones through a semi-quinone intermediate via a NAD(P)H-dependent single electron transfer. QOR is a member of the medium chain dehydrogenase/reductase family, but lacks the zinc-binding sites of the prototypical alcohol dehydrogenases of this group. 2-haloacrylate reductase, a member of this subgroup, catalyzes the NADPH-dependent reduction of a carbon-carbon double bond in organohalogen compounds. Although similar to QOR, Burkholderia 2-haloacrylate reductase does not act on the quinones 1,4-benzoquinone

>cd08273 MDR8 Medium chain dehydrogenases/reductase (MDR)/zinc-dependent alcohol dehydrogenase-like family

Probab=100.00  E-value=9.2e-31  Score=239.31  Aligned_cols=299  Identities=23%  Similarity=0.299  Sum_probs=231.1

Q ss_pred             eeEEEecC---CceEEEEecCCCCCCCcEEEEEeeeeeCcccHhhhhccccCCccCCCCcccCccceEEEEEeCCCCCCC
Q 017868           19 MAAWLLGV---NTLKIQPFELPSLGPYDVLVRMKAVGICGSDVHYLKTLRCADFVVKEPMVIGHECAGVIEKVGSEVKTL   95 (365)
Q Consensus        19 ~~~~~~~~---~~l~~~~~~~p~~~~~eVlI~v~~~~l~~~D~~~~~g~~~~~~~~~~p~~~G~e~~G~V~~vG~~v~~~   95 (365)
                      |++++...   ..+++.+.+.|.|.++||+|++.++++|+.|+..+.|.....  ..+|.++|+|++|+|+.+|+++++|
T Consensus         2 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~i~v~~~~i~~~d~~~~~g~~~~~--~~~~~~~g~e~~G~v~~vG~~v~~~   79 (331)
T cd08273           2 REVVVTRRGGPEVLKVVEADLPEPAAGEVVVKVEASGVSFADVQMRRGLYPDQ--PPLPFTPGYDLVGRVDALGSGVTGF   79 (331)
T ss_pred             eeEEEccCCCcccEEEeccCCCCCCCCeEEEEEEEEecCHHHHHHhCCCCCCC--CCCCcccccceEEEEEEeCCCCccC
Confidence            56666643   478999999999999999999999999999998887653221  2457899999999999999999999


Q ss_pred             CCCCEEEEcCCcCCCCCccccCCCCCCCCCccccccCCCCcceeeEEeecCCceEECCCCCCcchhccch-hhHHHHHHH
Q 017868           96 VPGDRVALEPGISCWRCDHCKGGRYNLCPEMKFFATPPVHGSLANQVVHPADLCFKLPDNVSLEEGAMCE-PLSVGLHAC  174 (365)
Q Consensus        96 ~~Gd~V~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~v~~~~~~~iP~~~~~~~a~~~~-~~~~a~~~~  174 (365)
                      ++||+|+++.                            ..|+|++|+.++.+.++++|+++++++++.++ ++.+||+++
T Consensus        80 ~~Gd~V~~~~----------------------------~~g~~~~~~~~~~~~~~~~p~~~~~~~a~~~~~~~~ta~~~l  131 (331)
T cd08273          80 EVGDRVAALT----------------------------RVGGNAEYINLDAKYLVPVPEGVDAAEAVCLVLNYVTAYQML  131 (331)
T ss_pred             CCCCEEEEeC----------------------------CCcceeeEEEechHHeEECCCCCCHHHHHhhhhHHHHHHHHH
Confidence            9999998852                            13889999999999999999999999887765 788899988


Q ss_pred             H-hcCCCCCCEEEEEcC-CHHHHHHHHHHHHHCCCCeEEEEeCChhHHHHHHHcCCCEEEeCCCCcccHHHHHHHHHHHh
Q 017868          175 R-RANIGPETNVLIMGA-GPIGLVTMLGAPRAFGAPRIVIVDVDDYRLSVAKEIGADNIVKVSTNLQDIAEEVEKIQKAM  252 (365)
Q Consensus       175 ~-~~~~~~g~~vlI~G~-g~~G~~ai~~l~~~~g~~~vi~v~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~i~~~~~~~  252 (365)
                      . .+++.+|++++|+|+ |.+|+++++ +++..|++ ++.+.. +++.++++++|+.. ++.  ...++...  .   ..
T Consensus       132 ~~~~~~~~g~~vlI~g~~g~ig~~~~~-~a~~~g~~-v~~~~~-~~~~~~~~~~g~~~-~~~--~~~~~~~~--~---~~  200 (331)
T cd08273         132 HRAAKVLTGQRVLIHGASGGVGQALLE-LALLAGAE-VYGTAS-ERNHAALRELGATP-IDY--RTKDWLPA--M---LT  200 (331)
T ss_pred             HHhcCCCCCCEEEEECCCcHHHHHHHH-HHHHcCCE-EEEEeC-HHHHHHHHHcCCeE-EcC--CCcchhhh--h---cc
Confidence            4 478999999999987 999999999 99999994 666666 88888889999653 332  22333322  1   12


Q ss_pred             CCCceEEEeCCCCHHHHHHHHHhcccCCEEEEEccCCCCccc--cc--------------hHhhhcCcEEEeeccc----
Q 017868          253 GTGIDVSFDCAGLNKTMSTALGATCAGGKVCLVGMGHHEMTV--PL--------------TPAAVREVDVVGVFRY----  312 (365)
Q Consensus       253 ~~~~d~vid~~g~~~~~~~~~~~l~~~G~~~~~g~~~~~~~~--~~--------------~~~~~~~~~i~~~~~~----  312 (365)
                      ++++|++++++|+. ....++++++.+|+++.+|........  ..              .....+..........    
T Consensus       201 ~~~~d~vl~~~~~~-~~~~~~~~l~~~g~~v~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  279 (331)
T cd08273         201 PGGVDVVFDGVGGE-SYEESYAALAPGGTLVCYGGNSSLLQGRRSLAALGSLLARLAKLKLLPTGRRATFYYVWRDRAED  279 (331)
T ss_pred             CCCceEEEECCchH-HHHHHHHHhcCCCEEEEEccCCCCCCccccccchhhhhhhhhhhcceeccceeEEEeechhcccC
Confidence            46899999999976 488899999999999999854322111  10              0011122222222211    


Q ss_pred             ----CCcHHHHHHHHHcCCCCCCCceEEEecCChhhHHHHHHHHhcCCCceEEEE
Q 017868          313 ----KNTWPLCLELLRSGKIDVKPLVTHRFGFSQKEVEEAFETSARGGTAIKVMF  363 (365)
Q Consensus       313 ----~~~~~~~~~~l~~g~~~~~~~~~~~~~~~~~~~~~a~~~~~~~~~~gk~vi  363 (365)
                          .+.+.+++++++++.+  .+...+.+++  +++.++++.+.++...||+|+
T Consensus       280 p~~~~~~~~~~~~~~~~~~l--~~~~~~~~~~--~~~~~a~~~~~~~~~~gkvv~  330 (331)
T cd08273         280 PKLFRQDLTELLDLLAKGKI--RPKIAKRLPL--SEVAEAHRLLESGKVVGKIVL  330 (331)
T ss_pred             HHHHHHHHHHHHHHHHCCCc--cCCcceEEcH--HHHHHHHHHHHcCCCcceEEe
Confidence                3567889999999988  4456677888  999999999998888899886

This group is a member of the medium chain dehydrogenases/reductase (MDR)/zinc-dependent alcohol dehydrogenase-like family, but lacks the zinc-binding sites of the zinc-dependent alcohol dehydrogenases. The medium chain dehydrogenases/reductase (MDR)/zinc-dependent alcohol dehydrogenase-like family, which contains the zinc-dependent alcohol dehydrogenase (ADH-Zn) and related proteins, is a diverse group of proteins related to the first identified member, class I mammalian ADH. MDRs display a broad range of activities and are distinguished from the smaller short chain dehydrogenases (~ 250 amino acids vs. the ~ 350 amino acids of the MDR). The MDR proteins have 2 domains: a C-terminal NAD(P)-binding Rossmann fold domain of a beta-alpha form and an N-terminal catalytic domain with distant homology to GroES. The MDR group contains a host of activities, including the founding alcoh

>cd08251 polyketide_synthase polyketide synthase

Probab=100.00  E-value=2.8e-31  Score=239.41  Aligned_cols=289  Identities=24%  Similarity=0.393  Sum_probs=227.9

Q ss_pred             CCCCCCCcEEEEEeeeeeCcccHhhhhccccCCccCCCCcccCccceEEEEEeCCCCCCCCCCCEEEEcCCcCCCCCccc
Q 017868           36 LPSLGPYDVLVRMKAVGICGSDVHYLKTLRCADFVVKEPMVIGHECAGVIEKVGSEVKTLVPGDRVALEPGISCWRCDHC  115 (365)
Q Consensus        36 ~p~~~~~eVlI~v~~~~l~~~D~~~~~g~~~~~~~~~~p~~~G~e~~G~V~~vG~~v~~~~~Gd~V~~~~~~~~~~~~~~  115 (365)
                      .|.+.+++|+||+.++++|+.|+..+.+....  ...+|.++|+|++|+|+.+|+++++|++||+|+++..         
T Consensus         2 ~p~~~~~~v~v~v~~~~i~~~d~~~~~~~~~~--~~~~~~~~g~e~~G~v~~~G~~v~~~~~Gd~V~~~~~---------   70 (303)
T cd08251           2 VAPPGPGEVRIQVRAFSLNFGDLLCVRGLYPT--MPPYPFTPGFEASGVVRAVGPHVTRLAVGDEVIAGTG---------   70 (303)
T ss_pred             CCCCCCCEEEEEEEEeecChHHHHHHCCCCCC--CCCCCCCcCceeeEEEEEECCCCCCCCCCCEEEEecC---------
Confidence            57789999999999999999999988765322  1245789999999999999999999999999988621         


Q ss_pred             cCCCCCCCCCccccccCCCCcceeeEEeecCCceEECCCCCCcchhccch-hhHHHHHHHHhcCCCCCCEEEEEcC-CHH
Q 017868          116 KGGRYNLCPEMKFFATPPVHGSLANQVVHPADLCFKLPDNVSLEEGAMCE-PLSVGLHACRRANIGPETNVLIMGA-GPI  193 (365)
Q Consensus       116 ~~~~~~~~~~~~~~~~~~~~g~~~~~~~v~~~~~~~iP~~~~~~~a~~~~-~~~~a~~~~~~~~~~~g~~vlI~G~-g~~  193 (365)
                                       ...|+|++|+.++++.++++|+++++++++.++ .+.+||++++...+++|++++|+|+ +.+
T Consensus        71 -----------------~~~g~~~~~~~~~~~~~~~~p~~~~~~~aa~~~~~~~ta~~~l~~~~~~~g~~vli~~~~~~~  133 (303)
T cd08251          71 -----------------ESMGGHATLVTVPEDQVVRKPASLSFEEACALPVVFLTVIDAFARAGLAKGEHILIQTATGGT  133 (303)
T ss_pred             -----------------CCCcceeeEEEccHHHeEECCCCCCHHHHHHhHHHHHHHHHHHHhcCCCCCCEEEEecCCcHH
Confidence                             135899999999999999999999999888876 7888999988888999999999965 999


Q ss_pred             HHHHHHHHHHHCCCCeEEEEeCChhHHHHHHHcCCCEEEeCCCCcccHHHHHHHHHHHhCCCceEEEeCCCCHHHHHHHH
Q 017868          194 GLVTMLGAPRAFGAPRIVIVDVDDYRLSVAKEIGADNIVKVSTNLQDIAEEVEKIQKAMGTGIDVSFDCAGLNKTMSTAL  273 (365)
Q Consensus       194 G~~ai~~l~~~~g~~~vi~v~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~i~~~~~~~~~~~d~vid~~g~~~~~~~~~  273 (365)
                      |+++++ +++.+|+ .++++++++++.+.++++|++.+++...  .++...+.....  +.++|+++|+++. ......+
T Consensus       134 g~~~~~-~a~~~g~-~v~~~~~~~~~~~~~~~~g~~~~~~~~~--~~~~~~i~~~~~--~~~~d~v~~~~~~-~~~~~~~  206 (303)
T cd08251         134 GLMAVQ-LARLKGA-EIYATASSDDKLEYLKQLGVPHVINYVE--EDFEEEIMRLTG--GRGVDVVINTLSG-EAIQKGL  206 (303)
T ss_pred             HHHHHH-HHHHcCC-EEEEEcCCHHHHHHHHHcCCCEEEeCCC--ccHHHHHHHHcC--CCCceEEEECCcH-HHHHHHH
Confidence            999999 9999999 5777778888999999999988776433  466666665532  5789999999985 4778889


Q ss_pred             HhcccCCEEEEEccCCCC--ccccchH----hhhcCcEEEeeccc-----CCcHHHHHHHHHcCCCCCCCceEEEecCCh
Q 017868          274 GATCAGGKVCLVGMGHHE--MTVPLTP----AAVREVDVVGVFRY-----KNTWPLCLELLRSGKIDVKPLVTHRFGFSQ  342 (365)
Q Consensus       274 ~~l~~~G~~~~~g~~~~~--~~~~~~~----~~~~~~~i~~~~~~-----~~~~~~~~~~l~~g~~~~~~~~~~~~~~~~  342 (365)
                      ++++++|+++.++.....  .......    ..++.+++......     .+.+.+++++++++.+  .+..++.|++  
T Consensus       207 ~~l~~~g~~v~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~--~~~~~~~~~~--  282 (303)
T cd08251         207 NCLAPGGRYVEIAMTALKSAPSVDLSVLSNNQSFHSVDLRKLLLLDPEFIADYQAEMVSLVEEGEL--RPTVSRIFPF--  282 (303)
T ss_pred             HHhccCcEEEEEeccCCCccCccChhHhhcCceEEEEehHHhhhhCHHHHHHHHHHHHHHHHCCCc--cCCCceEEcH--
Confidence            999999999998754321  1111111    11222222222111     2457788899999988  4456677888  


Q ss_pred             hhHHHHHHHHhcCCCceEEEE
Q 017868          343 KEVEEAFETSARGGTAIKVMF  363 (365)
Q Consensus       343 ~~~~~a~~~~~~~~~~gk~vi  363 (365)
                      +++.++++.+.++...+|+++
T Consensus       283 ~~~~~~~~~~~~~~~~~~iv~  303 (303)
T cd08251         283 DDIGEAYRYLSDRENIGKVVV  303 (303)
T ss_pred             HHHHHHHHHHHhCCCcceEeC
Confidence            999999999998888888874

Polyketide synthases produce polyketides in step by step mechanism that is similar to fatty acid synthesis. Enoyl reductase reduces a double to single bond. Erythromycin is one example of a polyketide generated by 3 complex enzymes (megasynthases). 2-enoyl thioester reductase (ETR) catalyzes the NADPH-dependent dependent conversion of trans-2-enoyl acyl carrier protein/coenzyme A (ACP/CoA) to acyl-(ACP/CoA) in fatty acid synthesis. 2-enoyl thioester reductase activity has been linked in Candida tropicalis as essential in maintaining mitiochondrial respiratory function. This ETR family is a part of the medium chain dehydrogenase/reductase family, but lack the zinc coordination sites characteristic of the alcohol dehydrogenases in this family. NAD(P)(H)-dependent oxidoreductases are the major enzymes in the interconversion of alcohols and aldehydes, or ketones. Alcohol dehydrogenase in the liver converts ethanol and NAD+ to acetaldehyde a

>TIGR02824 quinone_pig3 putative NAD(P)H quinone oxidoreductase, PIG3 family

Probab=100.00  E-value=6e-30  Score=232.93  Aligned_cols=307  Identities=23%  Similarity=0.328  Sum_probs=240.4

Q ss_pred             ceeEEEec---CCceEEEEecCCCCCCCcEEEEEeeeeeCcccHhhhhccccCCccCCCCcccCccceEEEEEeCCCCCC
Q 017868           18 NMAAWLLG---VNTLKIQPFELPSLGPYDVLVRMKAVGICGSDVHYLKTLRCADFVVKEPMVIGHECAGVIEKVGSEVKT   94 (365)
Q Consensus        18 ~~~~~~~~---~~~l~~~~~~~p~~~~~eVlI~v~~~~l~~~D~~~~~g~~~~~~~~~~p~~~G~e~~G~V~~vG~~v~~   94 (365)
                      |+++.+..   +..+++.+.+.|.+++++++|+|.++++|+.|+....+.....  ..+|.++|||++|+|+.+|+++.+
T Consensus         1 ~~~~~~~~~~~~~~~~~~~~~~~~l~~~~v~i~v~~~~~~~~d~~~~~~~~~~~--~~~~~~~g~e~~G~v~~vg~~~~~   78 (325)
T TIGR02824         1 MKAIEITEPGGPEVLVLVEVPLPVPKAGEVLIRVAAAGVNRPDLLQRAGKYPPP--PGASDILGLEVAGEVVAVGEGVSR   78 (325)
T ss_pred             CceEEEccCCCcccceEEeCCCCCCCCCEEEEEEEEEecCHHHHHHhcCCCCCC--CCCCCCccceeEEEEEEeCCCCCC
Confidence            35566554   3457777877777899999999999999999988776533211  234678999999999999999999


Q ss_pred             CCCCCEEEEcCCcCCCCCccccCCCCCCCCCccccccCCCCcceeeEEeecCCceEECCCCCCcchhccch-hhHHHHHH
Q 017868           95 LVPGDRVALEPGISCWRCDHCKGGRYNLCPEMKFFATPPVHGSLANQVVHPADLCFKLPDNVSLEEGAMCE-PLSVGLHA  173 (365)
Q Consensus        95 ~~~Gd~V~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~v~~~~~~~iP~~~~~~~a~~~~-~~~~a~~~  173 (365)
                      +++||+|+++.                            .+|+|++|+.++.+.++++|+++++.+++.+. .+.+++++
T Consensus        79 ~~~Gd~V~~~~----------------------------~~~~~~~~~~~~~~~~~~ip~~~~~~~~~~~~~~~~ta~~~  130 (325)
T TIGR02824        79 WKVGDRVCALV----------------------------AGGGYAEYVAVPAGQVLPVPEGLSLVEAAALPETFFTVWSN  130 (325)
T ss_pred             CCCCCEEEEcc----------------------------CCCcceeEEEecHHHcEeCCCCCCHHHHHhhhHHHHHHHHH
Confidence            99999998751                            24889999999999999999999988887765 78889988


Q ss_pred             H-HhcCCCCCCEEEEEcC-CHHHHHHHHHHHHHCCCCeEEEEeCChhHHHHHHHcCCCEEEeCCCCcccHHHHHHHHHHH
Q 017868          174 C-RRANIGPETNVLIMGA-GPIGLVTMLGAPRAFGAPRIVIVDVDDYRLSVAKEIGADNIVKVSTNLQDIAEEVEKIQKA  251 (365)
Q Consensus       174 ~-~~~~~~~g~~vlI~G~-g~~G~~ai~~l~~~~g~~~vi~v~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~i~~~~~~  251 (365)
                      + +...++++++++|+|+ |++|+++++ +++..|++ ++++.+++++.++++++|++.+++.  ...++.+.++...  
T Consensus       131 ~~~~~~~~~~~~vlv~g~~~~~g~~~~~-~a~~~g~~-v~~~~~~~~~~~~~~~~g~~~~~~~--~~~~~~~~~~~~~--  204 (325)
T TIGR02824       131 LFQRGGLKAGETVLIHGGASGIGTTAIQ-LAKAFGAR-VFTTAGSDEKCAACEALGADIAINY--REEDFVEVVKAET--  204 (325)
T ss_pred             HHHhcCCCCCCEEEEEcCcchHHHHHHH-HHHHcCCE-EEEEeCCHHHHHHHHHcCCcEEEec--CchhHHHHHHHHc--
Confidence            6 5688999999999986 999999999 99999994 6777778888888888998766553  2345555555443  


Q ss_pred             hCCCceEEEeCCCCHHHHHHHHHhcccCCEEEEEccCCC-CccccchHhhhcCcEEEeecccC-----------CcHHHH
Q 017868          252 MGTGIDVSFDCAGLNKTMSTALGATCAGGKVCLVGMGHH-EMTVPLTPAAVREVDVVGVFRYK-----------NTWPLC  319 (365)
Q Consensus       252 ~~~~~d~vid~~g~~~~~~~~~~~l~~~G~~~~~g~~~~-~~~~~~~~~~~~~~~i~~~~~~~-----------~~~~~~  319 (365)
                      .++++|++++++|.. .....+++++++|+++.++.... ........+..+++++.+.....           +.+.++
T Consensus       205 ~~~~~d~~i~~~~~~-~~~~~~~~l~~~g~~v~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  283 (325)
T TIGR02824       205 GGKGVDVILDIVGGS-YLNRNIKALALDGRIVQIGFQGGRKAELDLGPLLAKRLTITGSTLRARPVAEKAAIAAELREHV  283 (325)
T ss_pred             CCCCeEEEEECCchH-HHHHHHHhhccCcEEEEEecCCCCcCCCChHHHHhcCCEEEEEehhhcchhhhHHHHHHHHHHH
Confidence            246799999999964 77889999999999999975331 12333344457888888765321           234667


Q ss_pred             HHHHHcCCCCCCCceEEEecCChhhHHHHHHHHhcCCCceEEEEeC
Q 017868          320 LELLRSGKIDVKPLVTHRFGFSQKEVEEAFETSARGGTAIKVMFNL  365 (365)
Q Consensus       320 ~~~l~~g~~~~~~~~~~~~~~~~~~~~~a~~~~~~~~~~gk~vi~~  365 (365)
                      +++++++.+  .+..++.|++  +++.++++.+.++...+|+++++
T Consensus       284 ~~~~~~~~l--~~~~~~~~~~--~~~~~~~~~~~~~~~~~~~v~~~  325 (325)
T TIGR02824       284 WPLLASGRV--RPVIDKVFPL--EDAAQAHALMESGDHIGKIVLTV  325 (325)
T ss_pred             HHHHHCCcc--cCccccEEeH--HHHHHHHHHHHhCCCcceEEEeC
Confidence            888988887  4446677878  99999999999888889999874

Members of this family are putative quinone oxidoreductases that belong to the broader superfamily (modeled by Pfam pfam00107) of zinc-dependent alcohol (of medium chain length) dehydrogenases and quinone oxiooreductases. The alignment shows no motif of conserved Cys residues as are found in zinc-binding members of the superfamily, and members are likely to be quinone oxidoreductases instead. A member of this family in Homo sapiens, PIG3, is induced by p53 but is otherwise uncharacterized.

>cd08268 MDR2 Medium chain dehydrogenases/reductase (MDR)/zinc-dependent alcohol dehydrogenase-like family

Probab=100.00  E-value=1.4e-29  Score=230.79  Aligned_cols=312  Identities=27%  Similarity=0.391  Sum_probs=240.7

Q ss_pred             ceeEEEecC---CceEEEEecCCCCCCCcEEEEEeeeeeCcccHhhhhccccCCccCCCCcccCccceEEEEEeCCCCCC
Q 017868           18 NMAAWLLGV---NTLKIQPFELPSLGPYDVLVRMKAVGICGSDVHYLKTLRCADFVVKEPMVIGHECAGVIEKVGSEVKT   94 (365)
Q Consensus        18 ~~~~~~~~~---~~l~~~~~~~p~~~~~eVlI~v~~~~l~~~D~~~~~g~~~~~~~~~~p~~~G~e~~G~V~~vG~~v~~   94 (365)
                      |+++++...   ..+++.+.+.|.+.+++++|+|.++++|+.|+....+.....  ...|.++|||++|+|+.+|+++++
T Consensus         1 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~i~v~~~~~~~~d~~~~~~~~~~~--~~~~~~~g~e~~G~v~~~G~~~~~   78 (328)
T cd08268           1 MRAVRFHQFGGPEVLRIEELPVPAPGAGEVLIRVEAIGLNRADAMFRRGAYIEP--PPLPARLGYEAAGVVEAVGAGVTG   78 (328)
T ss_pred             CeEEEEeccCCcceeEEeecCCCCCCCCeEEEEEEEEecChHHhheeccccCCC--CCCCCCCCcceEEEEEeeCCCCCc
Confidence            456666643   477788888888999999999999999999998776643222  344778999999999999999999


Q ss_pred             CCCCCEEEEcCCcCCCCCccccCCCCCCCCCccccccCCCCcceeeEEeecCCceEECCCCCCcchhccch-hhHHHHHH
Q 017868           95 LVPGDRVALEPGISCWRCDHCKGGRYNLCPEMKFFATPPVHGSLANQVVHPADLCFKLPDNVSLEEGAMCE-PLSVGLHA  173 (365)
Q Consensus        95 ~~~Gd~V~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~v~~~~~~~iP~~~~~~~a~~~~-~~~~a~~~  173 (365)
                      |++||+|++++...                       ....|++++|+.++.+.++++|+++++++++.+. .+.+|+++
T Consensus        79 ~~~Gd~V~~~~~~~-----------------------~~~~g~~~~~~~~~~~~~~~~p~~~~~~~~~~~~~~~~~a~~~  135 (328)
T cd08268          79 FAVGDRVSVIPAAD-----------------------LGQYGTYAEYALVPAAAVVKLPDGLSFVEAAALWMQYLTAYGA  135 (328)
T ss_pred             CCCCCEEEeccccc-----------------------cCCCccceEEEEechHhcEeCCCCCCHHHHHHhhhHHHHHHHH
Confidence            99999998863211                       1235899999999999999999999988887775 88889998


Q ss_pred             HH-hcCCCCCCEEEEEcC-CHHHHHHHHHHHHHCCCCeEEEEeCChhHHHHHHHcCCCEEEeCCCCcccHHHHHHHHHHH
Q 017868          174 CR-RANIGPETNVLIMGA-GPIGLVTMLGAPRAFGAPRIVIVDVDDYRLSVAKEIGADNIVKVSTNLQDIAEEVEKIQKA  251 (365)
Q Consensus       174 ~~-~~~~~~g~~vlI~G~-g~~G~~ai~~l~~~~g~~~vi~v~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~i~~~~~~  251 (365)
                      +. ...+.++++++|+|+ +.+|+++++ +++..|+ .++.++.++++.+.++++|++.+++.+  ..++...+..... 
T Consensus       136 ~~~~~~~~~~~~vli~g~~~~~g~~~~~-~~~~~g~-~v~~~~~~~~~~~~~~~~g~~~~~~~~--~~~~~~~~~~~~~-  210 (328)
T cd08268         136 LVELAGLRPGDSVLITAASSSVGLAAIQ-IANAAGA-TVIATTRTSEKRDALLALGAAHVIVTD--EEDLVAEVLRITG-  210 (328)
T ss_pred             HHHhcCCCCCCEEEEecCccHHHHHHHH-HHHHcCC-EEEEEcCCHHHHHHHHHcCCCEEEecC--CccHHHHHHHHhC-
Confidence            74 578889999999987 999999999 8899999 467777788888888889987766543  2455555554432 


Q ss_pred             hCCCceEEEeCCCCHHHHHHHHHhcccCCEEEEEccCCCC-ccccchHhhhcCcEEEeeccc---------CCcHHHHHH
Q 017868          252 MGTGIDVSFDCAGLNKTMSTALGATCAGGKVCLVGMGHHE-MTVPLTPAAVREVDVVGVFRY---------KNTWPLCLE  321 (365)
Q Consensus       252 ~~~~~d~vid~~g~~~~~~~~~~~l~~~G~~~~~g~~~~~-~~~~~~~~~~~~~~i~~~~~~---------~~~~~~~~~  321 (365)
                       +.++|++++++|+ ......+++++++|+++.+|..... ..........++..+.+....         ...++++.+
T Consensus       211 -~~~~d~vi~~~~~-~~~~~~~~~l~~~g~~v~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  288 (328)
T cd08268         211 -GKGVDVVFDPVGG-PQFAKLADALAPGGTLVVYGALSGEPTPFPLKAALKKSLTFRGYSLDEITLDPEARRRAIAFILD  288 (328)
T ss_pred             -CCCceEEEECCch-HhHHHHHHhhccCCEEEEEEeCCCCCCCCchHHHhhcCCEEEEEecccccCCHHHHHHHHHHHHH
Confidence             5689999999997 4778889999999999998754321 122222245677776665321         224556667


Q ss_pred             HHHcCCCCCCCceEEEecCChhhHHHHHHHHhcCCCceEEEEeC
Q 017868          322 LLRSGKIDVKPLVTHRFGFSQKEVEEAFETSARGGTAIKVMFNL  365 (365)
Q Consensus       322 ~l~~g~~~~~~~~~~~~~~~~~~~~~a~~~~~~~~~~gk~vi~~  365 (365)
                      ++.++.+.  +...+.|++  +++.++++.+..+...+|++++.
T Consensus       289 ~~~~~~~~--~~~~~~~~~--~~~~~~~~~~~~~~~~~~vv~~~  328 (328)
T cd08268         289 GLASGALK--PVVDRVFPF--DDIVEAHRYLESGQQIGKIVVTP  328 (328)
T ss_pred             HHHCCCCc--CCcccEEcH--HHHHHHHHHHHcCCCCceEEEeC
Confidence            77778773  445677777  99999999999888889999864

This group is a member of the medium chain dehydrogenases/reductase (MDR)/zinc-dependent alcohol dehydrogenase-like family, but lacks the zinc-binding sites of the zinc-dependent alcohol dehydrogenases. The medium chain dehydrogenases/reductase (MDR)/zinc-dependent alcohol dehydrogenase-like family, which contains the zinc-dependent alcohol dehydrogenase (ADH-Zn) and related proteins, is a diverse group of proteins related to the first identified member, class I mammalian ADH. MDRs display a broad range of activities and are distinguished from the smaller short chain dehydrogenases (~ 250 amino acids vs. the ~ 350 amino acids of the MDR). The MDR proteins have 2 domains: a C-terminal NAD(P)-binding Rossmann fold domain of a beta-alpha form and an N-terminal catalytic domain with distant homology to GroES. The MDR group contains a host of activities, including the founding alcoh

>cd08241 QOR1 Quinone oxidoreductase (QOR)

Probab=99.98  E-value=1.6e-29  Score=229.86  Aligned_cols=305  Identities=30%  Similarity=0.490  Sum_probs=240.4

Q ss_pred             ceeEEEec---CCceEEEEecCCCCC-CCcEEEEEeeeeeCcccHhhhhccccCCccCCCCcccCccceEEEEEeCCCCC
Q 017868           18 NMAAWLLG---VNTLKIQPFELPSLG-PYDVLVRMKAVGICGSDVHYLKTLRCADFVVKEPMVIGHECAGVIEKVGSEVK   93 (365)
Q Consensus        18 ~~~~~~~~---~~~l~~~~~~~p~~~-~~eVlI~v~~~~l~~~D~~~~~g~~~~~~~~~~p~~~G~e~~G~V~~vG~~v~   93 (365)
                      |+++++..   ...+++.+.+ |.+. +++++|++.++++|+.|+....|....  ....|.++|+|++|+|+.+|+++.
T Consensus         1 ~~~~~~~~~~~~~~~~~~~~~-~~~~~~~~v~i~v~~~~i~~~d~~~~~g~~~~--~~~~~~~~g~e~~G~v~~~g~~~~   77 (323)
T cd08241           1 MKAVVCKELGGPEDLVLEEVP-PEPGAPGEVRIRVEAAGVNFPDLLMIQGKYQV--KPPLPFVPGSEVAGVVEAVGEGVT   77 (323)
T ss_pred             CeEEEEecCCCcceeEEecCC-CCCCCCCeEEEEEEEEecCHHHHHHHcCCCCC--CCCCCCcccceeEEEEEEeCCCCC
Confidence            46778763   3567777777 7665 599999999999999999887664321  123466899999999999999999


Q ss_pred             CCCCCCEEEEcCCcCCCCCccccCCCCCCCCCccccccCCCCcceeeEEeecCCceEECCCCCCcchhccch-hhHHHHH
Q 017868           94 TLVPGDRVALEPGISCWRCDHCKGGRYNLCPEMKFFATPPVHGSLANQVVHPADLCFKLPDNVSLEEGAMCE-PLSVGLH  172 (365)
Q Consensus        94 ~~~~Gd~V~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~v~~~~~~~iP~~~~~~~a~~~~-~~~~a~~  172 (365)
                      .+++||+|+++.                            ..|++++|+.++.+.++++|+++++.+++.+. ...+|++
T Consensus        78 ~~~~G~~V~~~~----------------------------~~~~~~~~~~~~~~~~~~ip~~~~~~~~~~~~~~~~~a~~  129 (323)
T cd08241          78 GFKVGDRVVALT----------------------------GQGGFAEEVVVPAAAVFPLPDGLSFEEAAALPVTYGTAYH  129 (323)
T ss_pred             CCCCCCEEEEec----------------------------CCceeEEEEEcCHHHceeCCCCCCHHHHhhhhhHHHHHHH
Confidence            999999999862                            14889999999999999999999988877664 7888898


Q ss_pred             HHH-hcCCCCCCEEEEEcC-CHHHHHHHHHHHHHCCCCeEEEEeCChhHHHHHHHcCCCEEEeCCCCcccHHHHHHHHHH
Q 017868          173 ACR-RANIGPETNVLIMGA-GPIGLVTMLGAPRAFGAPRIVIVDVDDYRLSVAKEIGADNIVKVSTNLQDIAEEVEKIQK  250 (365)
Q Consensus       173 ~~~-~~~~~~g~~vlI~G~-g~~G~~ai~~l~~~~g~~~vi~v~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~i~~~~~  250 (365)
                      ++. ...+.++++++|+|+ |.+|+++++ +++..|++ ++.++.++++.+.++++|+...+...  ..++.+.+.....
T Consensus       130 ~~~~~~~~~~~~~vli~g~~~~~g~~~~~-~a~~~g~~-v~~~~~~~~~~~~~~~~g~~~~~~~~--~~~~~~~i~~~~~  205 (323)
T cd08241         130 ALVRRARLQPGETVLVLGAAGGVGLAAVQ-LAKALGAR-VIAAASSEEKLALARALGADHVIDYR--DPDLRERVKALTG  205 (323)
T ss_pred             HHHHhcCCCCCCEEEEEcCCchHHHHHHH-HHHHhCCE-EEEEeCCHHHHHHHHHcCCceeeecC--CccHHHHHHHHcC
Confidence            875 678999999999997 999999999 99999995 77777888889988889987766533  3456666665432


Q ss_pred             HhCCCceEEEeCCCCHHHHHHHHHhcccCCEEEEEccCCCCcc-ccchHhhhcCcEEEeeccc----------CCcHHHH
Q 017868          251 AMGTGIDVSFDCAGLNKTMSTALGATCAGGKVCLVGMGHHEMT-VPLTPAAVREVDVVGVFRY----------KNTWPLC  319 (365)
Q Consensus       251 ~~~~~~d~vid~~g~~~~~~~~~~~l~~~G~~~~~g~~~~~~~-~~~~~~~~~~~~i~~~~~~----------~~~~~~~  319 (365)
                        +.++|++++++|. .....++++++++|+++.++....... +.......++.++.+....          .+.+.++
T Consensus       206 --~~~~d~v~~~~g~-~~~~~~~~~~~~~g~~v~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  282 (323)
T cd08241         206 --GRGVDVVYDPVGG-DVFEASLRSLAWGGRLLVIGFASGEIPQIPANLLLLKNISVVGVYWGAYARREPELLRANLAEL  282 (323)
T ss_pred             --CCCcEEEEECccH-HHHHHHHHhhccCCEEEEEccCCCCcCcCCHHHHhhcCcEEEEEecccccchhHHHHHHHHHHH
Confidence              5689999999996 477889999999999999876433222 2233445677777775432          2456789


Q ss_pred             HHHHHcCCCCCCCceEEEecCChhhHHHHHHHHhcCCCceEEEEe
Q 017868          320 LELLRSGKIDVKPLVTHRFGFSQKEVEEAFETSARGGTAIKVMFN  364 (365)
Q Consensus       320 ~~~l~~g~~~~~~~~~~~~~~~~~~~~~a~~~~~~~~~~gk~vi~  364 (365)
                      ++++.++.+  .+..++.|++  +++.++++.+.++...+|++++
T Consensus       283 ~~~~~~~~~--~~~~~~~~~~--~~~~~~~~~~~~~~~~~~vvv~  323 (323)
T cd08241         283 FDLLAEGKI--RPHVSAVFPL--EQAAEALRALADRKATGKVVLT  323 (323)
T ss_pred             HHHHHCCCc--ccccceEEcH--HHHHHHHHHHHhCCCCCcEEeC
Confidence            999999988  4556778888  9999999998888888898874

QOR catalyzes the conversion of a quinone + NAD(P)H to a hydroquinone + NAD(P)+. Quinones are cyclic diones derived from aromatic compounds. Membrane bound QOR acts in the respiratory chains of bacteria and mitochondria, while soluble QOR acts to protect from toxic quinones (e.g. DT-diaphorase) or as a soluble eye-lens protein in some vertebrates (e.g. zeta-crystalin). QOR reduces quinones through a semi-quinone intermediate via a NAD(P)H-dependent single electron transfer. QOR is a member of the medium chain dehydrogenase/reductase family, but lacks the zinc-binding sites of the prototypical alcohol dehydrogenases of this group. NAD(P)(H)-dependent oxidoreductases are the major enzymes in the interconversion of alcohols and aldehydes, or ketones. Alcohol dehydrogenase in the liver converts ethanol and NAD+ to acetaldehyde and NADH, while in yeast and some other microorganisms ADH catalyzes the conversion acetaldehyde to ethanol in alcoholic

>cd05289 MDR_like_2 alcohol dehydrogenase and quinone reductase-like medium chain degydrogenases/reductases

Probab=99.98  E-value=5.3e-30  Score=231.65  Aligned_cols=301  Identities=27%  Similarity=0.361  Sum_probs=231.4

Q ss_pred             ceeEEEecCC---ceEEEEecCCCCCCCcEEEEEeeeeeCcccHhhhhccccCCccCCCCcccCccceEEEEEeCCCCCC
Q 017868           18 NMAAWLLGVN---TLKIQPFELPSLGPYDVLVRMKAVGICGSDVHYLKTLRCADFVVKEPMVIGHECAGVIEKVGSEVKT   94 (365)
Q Consensus        18 ~~~~~~~~~~---~l~~~~~~~p~~~~~eVlI~v~~~~l~~~D~~~~~g~~~~~~~~~~p~~~G~e~~G~V~~vG~~v~~   94 (365)
                      |+++++..++   .+++.+.+.|.++++||+|+|.++++|+.|+....|..........|.++|||++|+|+.+|+++++
T Consensus         1 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~v~v~~~~i~~~d~~~~~g~~~~~~~~~~~~~~g~e~~G~v~~~G~~~~~   80 (309)
T cd05289           1 MKAVRIHEYGGPEVLELADVPTPEPGPGEVLVKVHAAGVNPVDLKIREGLLKAAFPLTLPLIPGHDVAGVVVAVGPGVTG   80 (309)
T ss_pred             CceEEEcccCCccceeecccCCCCCCCCeEEEEEEEeeCCHHHHHHhcCCccccCCCCCCCccccceeEEEEeeCCCCCC
Confidence            4677776544   3667788888899999999999999999999887764321112344788999999999999999999


Q ss_pred             CCCCCEEEEcCCcCCCCCccccCCCCCCCCCccccccCCCCcceeeEEeecCCceEECCCCCCcchhccch-hhHHHHHH
Q 017868           95 LVPGDRVALEPGISCWRCDHCKGGRYNLCPEMKFFATPPVHGSLANQVVHPADLCFKLPDNVSLEEGAMCE-PLSVGLHA  173 (365)
Q Consensus        95 ~~~Gd~V~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~v~~~~~~~iP~~~~~~~a~~~~-~~~~a~~~  173 (365)
                      +++||+|+++...                         ...|+|++|+.++...++++|+++++..++.++ ...+++++
T Consensus        81 ~~~G~~V~~~~~~-------------------------~~~g~~~~~~~~~~~~~~~~p~~~~~~~~~~~~~~~~~a~~~  135 (309)
T cd05289          81 FKVGDEVFGMTPF-------------------------TRGGAYAEYVVVPADELALKPANLSFEEAAALPLAGLTAWQA  135 (309)
T ss_pred             CCCCCEEEEccCC-------------------------CCCCcceeEEEecHHHhccCCCCCCHHHHHhhhHHHHHHHHH
Confidence            9999999886310                         125899999999999999999999988888775 67788888


Q ss_pred             HHh-cCCCCCCEEEEEcC-CHHHHHHHHHHHHHCCCCeEEEEeCChhHHHHHHHcCCCEEEeCCCCcccHHHHHHHHHHH
Q 017868          174 CRR-ANIGPETNVLIMGA-GPIGLVTMLGAPRAFGAPRIVIVDVDDYRLSVAKEIGADNIVKVSTNLQDIAEEVEKIQKA  251 (365)
Q Consensus       174 ~~~-~~~~~g~~vlI~G~-g~~G~~ai~~l~~~~g~~~vi~v~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~i~~~~~~  251 (365)
                      +.. ..+.+++++||+|+ |.+|+++++ +++..|++ ++.+..++ +.++++++|++.++....  .++.+      ..
T Consensus       136 ~~~~~~~~~~~~vlv~g~~g~~g~~~~~-~a~~~g~~-v~~~~~~~-~~~~~~~~g~~~~~~~~~--~~~~~------~~  204 (309)
T cd05289         136 LFELGGLKAGQTVLIHGAAGGVGSFAVQ-LAKARGAR-VIATASAA-NADFLRSLGADEVIDYTK--GDFER------AA  204 (309)
T ss_pred             HHhhcCCCCCCEEEEecCCchHHHHHHH-HHHHcCCE-EEEEecch-hHHHHHHcCCCEEEeCCC--Cchhh------cc
Confidence            854 56899999999997 999999999 99999995 55555556 788888899877665432  23322      12


Q ss_pred             hCCCceEEEeCCCCHHHHHHHHHhcccCCEEEEEccCCCCccccchHhhhcCcEEEeeccc--CCcHHHHHHHHHcCCCC
Q 017868          252 MGTGIDVSFDCAGLNKTMSTALGATCAGGKVCLVGMGHHEMTVPLTPAAVREVDVVGVFRY--KNTWPLCLELLRSGKID  329 (365)
Q Consensus       252 ~~~~~d~vid~~g~~~~~~~~~~~l~~~G~~~~~g~~~~~~~~~~~~~~~~~~~i~~~~~~--~~~~~~~~~~l~~g~~~  329 (365)
                      .+.++|++++++|+. ....++++++++|+++.++.......    ....++.+.......  .+.+.+++++++++.+ 
T Consensus       205 ~~~~~d~v~~~~~~~-~~~~~~~~l~~~g~~v~~g~~~~~~~----~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-  278 (309)
T cd05289         205 APGGVDAVLDTVGGE-TLARSLALVKPGGRLVSIAGPPPAEQ----AAKRRGVRAGFVFVEPDGEQLAELAELVEAGKL-  278 (309)
T ss_pred             CCCCceEEEECCchH-HHHHHHHHHhcCcEEEEEcCCCcchh----hhhhccceEEEEEecccHHHHHHHHHHHHCCCE-
Confidence            356899999999976 77899999999999999875432111    222334443333211  4578889999999987 


Q ss_pred             CCCceEEEecCChhhHHHHHHHHhcCCCceEEEE
Q 017868          330 VKPLVTHRFGFSQKEVEEAFETSARGGTAIKVMF  363 (365)
Q Consensus       330 ~~~~~~~~~~~~~~~~~~a~~~~~~~~~~gk~vi  363 (365)
                       .+..++.|++  ++++++++.+..+...+|+++
T Consensus       279 -~~~~~~~~~~--~~~~~a~~~~~~~~~~~kvv~  309 (309)
T cd05289         279 -RPVVDRVFPL--EDAAEAHERLESGHARGKVVL  309 (309)
T ss_pred             -EEeeccEEcH--HHHHHHHHHHHhCCCCCcEeC
Confidence             4556788888  999999999988877788774

Members identified as zinc-dependent alcohol dehydrogenases and quinone oxidoreductase. QOR catalyzes the conversion of a quinone + NAD(P)H to a hydroquinone + NAD(P)+. Quinones are cyclic diones derived from aromatic compounds. Membrane bound QOR actin the respiratory chains of bacteria and mitochondria, while soluble QOR acts to protect from toxic quinones (e.g. DT-diaphorase) or as a soluble eye-lens protein in some vertebrates (e.g. zeta-crystalin). QOR reduces quinones through a semi-quinone intermediate via a NAD(P)H-dependent single electron transfer. QOR is a member of the medium chain dehydrogenase/reductase family, but lacks the zinc-binding sites of the prototypical alcohol dehydrogenases of this group. NAD(P)(H)-dependent oxidoreductases are the major enzymes in the interconversion of alcohols and aldehydes, or ketones. Alcohol dehydrogenase in the liver converts et

>cd08267 MDR1 Medium chain dehydrogenases/reductase (MDR)/zinc-dependent alcohol dehydrogenase-like family

Probab=99.98  E-value=9.2e-30  Score=231.32  Aligned_cols=295  Identities=27%  Similarity=0.322  Sum_probs=221.9

Q ss_pred             EEEEecCCCCCCCcEEEEEeeeeeCcccHhhhhccccCCccCCCCcccCccceEEEEEeCCCCCCCCCCCEEEEcCCcCC
Q 017868           30 KIQPFELPSLGPYDVLVRMKAVGICGSDVHYLKTLRCADFVVKEPMVIGHECAGVIEKVGSEVKTLVPGDRVALEPGISC  109 (365)
Q Consensus        30 ~~~~~~~p~~~~~eVlI~v~~~~l~~~D~~~~~g~~~~~~~~~~p~~~G~e~~G~V~~vG~~v~~~~~Gd~V~~~~~~~~  109 (365)
                      ++.+.|.|++.++||+|++.++++|+.|.....|..........|..+|+|++|+|.++|++++++++||+|++....  
T Consensus        15 ~~~~~~~~~~~~~~v~v~v~~~~i~~~d~~~~~g~~~~~~~~~~~~~~g~e~~G~v~~~G~~v~~~~~Gd~V~~~~~~--   92 (319)
T cd08267          15 LEVEVPIPTPKPGEVLVKVHAASVNPVDWKLRRGPPKLLLGRPFPPIPGMDFAGEVVAVGSGVTRFKVGDEVFGRLPP--   92 (319)
T ss_pred             ccccCCCCCCCCCEEEEEEEEeeCCHHHHHHHcCCCcccccCCCCCcccceeeEEEEEeCCCCCCCCCCCEEEEeccC--
Confidence            778899999999999999999999999998877643211112346789999999999999999999999999876321  


Q ss_pred             CCCccccCCCCCCCCCccccccCCCCcceeeEEeecCCceEECCCCCCcchhccch-hhHHHHHHHHh-cCCCCCCEEEE
Q 017868          110 WRCDHCKGGRYNLCPEMKFFATPPVHGSLANQVVHPADLCFKLPDNVSLEEGAMCE-PLSVGLHACRR-ANIGPETNVLI  187 (365)
Q Consensus       110 ~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~v~~~~~~~iP~~~~~~~a~~~~-~~~~a~~~~~~-~~~~~g~~vlI  187 (365)
                                             ...|+|++|+.++.+.++++|+++++++++.++ .+.+||++++. .++++|++|+|
T Consensus        93 -----------------------~~~g~~~~~~~~~~~~~~~ip~~~~~~~~~~~~~~~~~a~~~~~~~~~~~~g~~vli  149 (319)
T cd08267          93 -----------------------KGGGALAEYVVAPESGLAKKPEGVSFEEAAALPVAGLTALQALRDAGKVKPGQRVLI  149 (319)
T ss_pred             -----------------------CCCceeeEEEEechhheEECCCCCCHHHHHhhhhHHHHHHHHHHHhcCCCCCCEEEE
Confidence                                   135899999999999999999999998888775 78889999854 56899999999


Q ss_pred             EcC-CHHHHHHHHHHHHHCCCCeEEEEeCChhHHHHHHHcCCCEEEeCCCCcccHHHHHHHHHHHhCCCceEEEeCCCCH
Q 017868          188 MGA-GPIGLVTMLGAPRAFGAPRIVIVDVDDYRLSVAKEIGADNIVKVSTNLQDIAEEVEKIQKAMGTGIDVSFDCAGLN  266 (365)
Q Consensus       188 ~G~-g~~G~~ai~~l~~~~g~~~vi~v~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~i~~~~~~~~~~~d~vid~~g~~  266 (365)
                      +|+ |.+|+++++ +++..|++ +++++++ ++.+.++++|++.+++...  .++.   +..  ..++++|++++|+|..
T Consensus       150 ~g~~g~~g~~~~~-la~~~g~~-v~~~~~~-~~~~~~~~~g~~~~~~~~~--~~~~---~~~--~~~~~~d~vi~~~~~~  219 (319)
T cd08267         150 NGASGGVGTFAVQ-IAKALGAH-VTGVCST-RNAELVRSLGADEVIDYTT--EDFV---ALT--AGGEKYDVIFDAVGNS  219 (319)
T ss_pred             EcCCcHHHHHHHH-HHHHcCCE-EEEEeCH-HHHHHHHHcCCCEeecCCC--CCcc---hhc--cCCCCCcEEEECCCch
Confidence            997 999999999 99999994 6666554 7888889999877665432  2332   111  2357899999999842


Q ss_pred             -HHHHHHHHhcccCCEEEEEccCCCCccccc-----h-HhhhcCcEEEeecccCCcHHHHHHHHHcCCCCCCCceEEEec
Q 017868          267 -KTMSTALGATCAGGKVCLVGMGHHEMTVPL-----T-PAAVREVDVVGVFRYKNTWPLCLELLRSGKIDVKPLVTHRFG  339 (365)
Q Consensus       267 -~~~~~~~~~l~~~G~~~~~g~~~~~~~~~~-----~-~~~~~~~~i~~~~~~~~~~~~~~~~l~~g~~~~~~~~~~~~~  339 (365)
                       ......+..++++|+++.+|..........     . ....+.+.........+.+.+++++++++.+  .+..++.|+
T Consensus       220 ~~~~~~~~~~l~~~g~~i~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~--~~~~~~~~~  297 (319)
T cd08267         220 PFSLYRASLALKPGGRYVSVGGGPSGLLLVLLLLPLTLGGGGRRLKFFLAKPNAEDLEQLAELVEEGKL--KPVIDSVYP  297 (319)
T ss_pred             HHHHHHhhhccCCCCEEEEeccccccccccccccchhhccccceEEEEEecCCHHHHHHHHHHHHCCCe--eeeeeeEEc
Confidence             233344445999999999985432211111     1 1112222222221125678899999999988  455778888


Q ss_pred             CChhhHHHHHHHHhcCCCceEEEE
Q 017868          340 FSQKEVEEAFETSARGGTAIKVMF  363 (365)
Q Consensus       340 ~~~~~~~~a~~~~~~~~~~gk~vi  363 (365)
                      +  +++.+|++.+.++...+|+++
T Consensus       298 ~--~~i~~a~~~~~~~~~~~~vvv  319 (319)
T cd08267         298 L--EDAPEAYRRLKSGRARGKVVI  319 (319)
T ss_pred             H--HHHHHHHHHHhcCCCCCcEeC
Confidence            8  999999999998888888874

This group is a member of the medium chain dehydrogenases/reductase (MDR)/zinc-dependent alcohol dehydrogenase-like family, but lacks the zinc-binding sites of the zinc-dependent alcohol dehydrogenases. The medium chain dehydrogenases/reductase (MDR)/zinc-dependent alcohol dehydrogenase-like family, which contains the zinc-dependent alcohol dehydrogenase (ADH-Zn) and related proteins, is a diverse group of proteins related to the first identified member, class I mammalian ADH. MDRs display a broad range of activities and are distinguished from the smaller short chain dehydrogenases (~ 250 amino acids vs. the ~ 350 amino acids of the MDR). The MDR proteins have 2 domains: a C-terminal NAD(P)-binding Rossmann fold domain of a beta-alpha form and an N-terminal catalytic domain with distant homology to GroES. The MDR group contains a host of activities, including the founding alcoh

>cd08275 MDR3 Medium chain dehydrogenases/reductase (MDR)/zinc-dependent alcohol dehydrogenase-like family

Probab=99.97  E-value=9.4e-29  Score=226.44  Aligned_cols=296  Identities=29%  Similarity=0.382  Sum_probs=231.7

Q ss_pred             CceEEEEecCCCCCCCcEEEEEeeeeeCcccHhhhhccccCCccCCCCcccCccceEEEEEeCCCCCCCCCCCEEEEcCC
Q 017868           27 NTLKIQPFELPSLGPYDVLVRMKAVGICGSDVHYLKTLRCADFVVKEPMVIGHECAGVIEKVGSEVKTLVPGDRVALEPG  106 (365)
Q Consensus        27 ~~l~~~~~~~p~~~~~eVlI~v~~~~l~~~D~~~~~g~~~~~~~~~~p~~~G~e~~G~V~~vG~~v~~~~~Gd~V~~~~~  106 (365)
                      ..+++.+.+.|.+.++||+|++.++++|+.|+....|....  ....|.++|+|++|+|+.+|++++++++||+|+++. 
T Consensus        12 ~~~~~~~~~~~~~~~~~v~i~v~~~~i~~~d~~~~~g~~~~--~~~~~~~~g~e~~G~v~~~g~~~~~~~~G~~V~~~~-   88 (337)
T cd08275          12 DKLKVEKEALPEPSSGEVRVRVEACGLNFADLMARQGLYDS--APKPPFVPGFECAGTVEAVGEGVKDFKVGDRVMGLT-   88 (337)
T ss_pred             cceEEEecCCCCCCCCEEEEEEEEEecCHHHHHHHCCCCCC--CCCCCCCCcceeEEEEEEECCCCcCCCCCCEEEEec-
Confidence            36788888888899999999999999999999887764321  124477899999999999999999999999998852 


Q ss_pred             cCCCCCccccCCCCCCCCCccccccCCCCcceeeEEeecCCceEECCCCCCcchhccch-hhHHHHHHH-HhcCCCCCCE
Q 017868          107 ISCWRCDHCKGGRYNLCPEMKFFATPPVHGSLANQVVHPADLCFKLPDNVSLEEGAMCE-PLSVGLHAC-RRANIGPETN  184 (365)
Q Consensus       107 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~v~~~~~~~iP~~~~~~~a~~~~-~~~~a~~~~-~~~~~~~g~~  184 (365)
                                                 ..|+|++|+.++.+.++++|+++++.+++.++ ++.+|++++ +.+++++|++
T Consensus        89 ---------------------------~~~~~~~~~~~~~~~~~~ip~~~~~~~~~~~~~~~~~a~~~~~~~~~~~~~~~  141 (337)
T cd08275          89 ---------------------------RFGGYAEVVNVPADQVFPLPDGMSFEEAAAFPVNYLTAYYALFELGNLRPGQS  141 (337)
T ss_pred             ---------------------------CCCeeeeEEEecHHHeEECCCCCCHHHHhhhhHHHHHHHHHHHHhhCCCCCCE
Confidence                                       24889999999999999999999998888776 888899987 4688999999


Q ss_pred             EEEEcC-CHHHHHHHHHHHHHCCCCeEEEEe-CChhHHHHHHHcCCCEEEeCCCCcccHHHHHHHHHHHhCCCceEEEeC
Q 017868          185 VLIMGA-GPIGLVTMLGAPRAFGAPRIVIVD-VDDYRLSVAKEIGADNIVKVSTNLQDIAEEVEKIQKAMGTGIDVSFDC  262 (365)
Q Consensus       185 vlI~G~-g~~G~~ai~~l~~~~g~~~vi~v~-~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~i~~~~~~~~~~~d~vid~  262 (365)
                      |+|+|+ |.+|+++++ +++.. . .+.+++ .++++.++++.+|++.+++.  ...++...++...   +.++|+++|+
T Consensus       142 vli~g~~g~~g~~~~~-~a~~~-~-~~~~~~~~~~~~~~~~~~~g~~~~~~~--~~~~~~~~~~~~~---~~~~d~v~~~  213 (337)
T cd08275         142 VLVHSAAGGVGLAAGQ-LCKTV-P-NVTVVGTASASKHEALKENGVTHVIDY--RTQDYVEEVKKIS---PEGVDIVLDA  213 (337)
T ss_pred             EEEEcCcchHHHHHHH-HHHHc-c-CcEEEEeCCHHHHHHHHHcCCcEEeeC--CCCcHHHHHHHHh---CCCceEEEEC
Confidence            999997 999999999 88887 2 233333 34567888888998776653  3356666666553   4689999999


Q ss_pred             CCCHHHHHHHHHhcccCCEEEEEccCCCCc--c---------------ccchHhhhcCcEEEeeccc---------CCcH
Q 017868          263 AGLNKTMSTALGATCAGGKVCLVGMGHHEM--T---------------VPLTPAAVREVDVVGVFRY---------KNTW  316 (365)
Q Consensus       263 ~g~~~~~~~~~~~l~~~G~~~~~g~~~~~~--~---------------~~~~~~~~~~~~i~~~~~~---------~~~~  316 (365)
                      +|+. .....+++++++|+++.+|......  .               .....+..++.++.+....         ...+
T Consensus       214 ~g~~-~~~~~~~~l~~~g~~v~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  292 (337)
T cd08275         214 LGGE-DTRKSYDLLKPMGRLVVYGAANLVTGEKRSWFKLAKKWWNRPKVDPMKLISENKSVLGFNLGWLFEERELLTEVM  292 (337)
T ss_pred             CcHH-HHHHHHHhhccCcEEEEEeecCCcCcccccccccccccccccccCHHHHhhcCceEEEeechhhhhChHHHHHHH
Confidence            9975 6788999999999999987543210  1               1112345667777665421         1246


Q ss_pred             HHHHHHHHcCCCCCCCceEEEecCChhhHHHHHHHHhcCCCceEEEEeC
Q 017868          317 PLCLELLRSGKIDVKPLVTHRFGFSQKEVEEAFETSARGGTAIKVMFNL  365 (365)
Q Consensus       317 ~~~~~~l~~g~~~~~~~~~~~~~~~~~~~~~a~~~~~~~~~~gk~vi~~  365 (365)
                      .+++++++++.+  .+..++.|++  ++++++++.+.++...+|+++++
T Consensus       293 ~~~~~~~~~~~~--~~~~~~~~~~--~~~~~~~~~~~~~~~~~kvv~~~  337 (337)
T cd08275         293 DKLLKLYEEGKI--KPKIDSVFPF--EEVGEAMRRLQSRKNIGKVVLTP  337 (337)
T ss_pred             HHHHHHHHCCCC--CCceeeEEcH--HHHHHHHHHHHcCCCcceEEEeC
Confidence            778889999987  4456677888  99999999999888889999864

This group is a member of the medium chain dehydrogenases/reductase (MDR)/zinc-dependent alcohol dehydrogenase-like family, but lacks the zinc-binding sites of the zinc-dependent alcohol dehydrogenases. The medium chain dehydrogenases/reductase (MDR)/zinc-dependent alcohol dehydrogenase-like family, which contains the zinc-dependent alcohol dehydrogenase (ADH-Zn) and related proteins, is a diverse group of proteins related to the first identified member, class I mammalian ADH. MDRs display a broad range of activities and are distinguished from the smaller short chain dehydrogenases (~ 250 amino acids vs. the ~ 350 amino acids of the MDR). The MDR proteins have 2 domains: a C-terminal NAD(P)-binding Rossmann fold domain of a beta-alpha form and an N-terminal catalytic domain with distant homology to GroES. The MDR group contains a host of activities, including the founding alcoh

>cd05195 enoyl_red enoyl reductase of polyketide synthase

Probab=99.97  E-value=8.1e-29  Score=221.79  Aligned_cols=276  Identities=25%  Similarity=0.322  Sum_probs=216.7

Q ss_pred             CcEEEEEeeeeeCcccHhhhhccccCCccCCCCcccCccceEEEEEeCCCCCCCCCCCEEEEcCCcCCCCCccccCCCCC
Q 017868           42 YDVLVRMKAVGICGSDVHYLKTLRCADFVVKEPMVIGHECAGVIEKVGSEVKTLVPGDRVALEPGISCWRCDHCKGGRYN  121 (365)
Q Consensus        42 ~eVlI~v~~~~l~~~D~~~~~g~~~~~~~~~~p~~~G~e~~G~V~~vG~~v~~~~~Gd~V~~~~~~~~~~~~~~~~~~~~  121 (365)
                      +||+|||.++++|+.|+....|..     ..+|.++|+|++|+|+++|++++.|++||+|+++                 
T Consensus         1 ~~v~i~v~~~~~~~~d~~~~~g~~-----~~~~~~~g~e~~G~v~~~g~~~~~~~~Gd~V~~~-----------------   58 (293)
T cd05195           1 DEVEVEVKAAGLNFRDVLVALGLL-----PGDETPLGLECSGIVTRVGSGVTGLKVGDRVMGL-----------------   58 (293)
T ss_pred             CceEEEEEEEecCHHHHHHHhCCC-----CCCCCccceeeeEEEEeecCCccCCCCCCEEEEE-----------------
Confidence            589999999999999999887642     2357899999999999999999999999999875                 


Q ss_pred             CCCCccccccCCCCcceeeEEeecCCceEECCCCCCcchhccch-hhHHHHHHH-HhcCCCCCCEEEEEcC-CHHHHHHH
Q 017868          122 LCPEMKFFATPPVHGSLANQVVHPADLCFKLPDNVSLEEGAMCE-PLSVGLHAC-RRANIGPETNVLIMGA-GPIGLVTM  198 (365)
Q Consensus       122 ~~~~~~~~~~~~~~g~~~~~~~v~~~~~~~iP~~~~~~~a~~~~-~~~~a~~~~-~~~~~~~g~~vlI~G~-g~~G~~ai  198 (365)
                                  ..|+|+||+.++.+.++++|+++++.+++.++ +..+++.++ +...+++|++|+|+|+ |.+|++++
T Consensus        59 ------------~~g~~~~~~~~~~~~~~~~p~~~~~~~~~~~~~~~~~a~~~~~~~~~~~~g~~vlv~g~~g~~g~~~~  126 (293)
T cd05195          59 ------------APGAFATHVRVDARLVVKIPDSLSFEEAATLPVAYLTAYYALVDLARLQKGESVLIHAAAGGVGQAAI  126 (293)
T ss_pred             ------------ecCcccceEEechhheEeCCCCCCHHHHhhchHHHHHHHHHHHHHhccCCCCEEEEecCCCHHHHHHH
Confidence                        24899999999999999999999999888875 778898887 4588999999999975 99999999


Q ss_pred             HHHHHHCCCCeEEEEeCChhHHHHHHHcC--CCEEEeCCCCcccHHHHHHHHHHHhCCCceEEEeCCCCHHHHHHHHHhc
Q 017868          199 LGAPRAFGAPRIVIVDVDDYRLSVAKEIG--ADNIVKVSTNLQDIAEEVEKIQKAMGTGIDVSFDCAGLNKTMSTALGAT  276 (365)
Q Consensus       199 ~~l~~~~g~~~vi~v~~~~~~~~~~~~~g--~~~~~~~~~~~~~~~~~i~~~~~~~~~~~d~vid~~g~~~~~~~~~~~l  276 (365)
                      + +++..|+ .++.+..++++.+.+++++  ++.+++.  ...++.+.+++...  +.++|+++|++|.. .....++++
T Consensus       127 ~-~a~~~g~-~v~~~~~~~~~~~~~~~~~~~~~~~~~~--~~~~~~~~~~~~~~--~~~~d~vi~~~~~~-~~~~~~~~l  199 (293)
T cd05195         127 Q-LAQHLGA-EVFATVGSEEKREFLRELGGPVDHIFSS--RDLSFADGILRATG--GRGVDVVLNSLSGE-LLRASWRCL  199 (293)
T ss_pred             H-HHHHcCC-EEEEEeCCHHHHHHHHHhCCCcceEeec--CchhHHHHHHHHhC--CCCceEEEeCCCch-HHHHHHHhc
Confidence            9 9999999 5777778888888888887  5666553  23455555655432  56899999999986 888999999


Q ss_pred             ccCCEEEEEccCCCC--ccccchHhhhcCcEEEeecc-----c-----CCcHHHHHHHHHcCCCCCCCceEEEecCChhh
Q 017868          277 CAGGKVCLVGMGHHE--MTVPLTPAAVREVDVVGVFR-----Y-----KNTWPLCLELLRSGKIDVKPLVTHRFGFSQKE  344 (365)
Q Consensus       277 ~~~G~~~~~g~~~~~--~~~~~~~~~~~~~~i~~~~~-----~-----~~~~~~~~~~l~~g~~~~~~~~~~~~~~~~~~  344 (365)
                      +++|+++.++.....  ...... ...++..+.....     .     .+.+.+++++++++.+  .+..++.+.+  ++
T Consensus       200 ~~~g~~v~~g~~~~~~~~~~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~--~~~~~~~~~~--~~  274 (293)
T cd05195         200 APFGRFVEIGKRDILSNSKLGMR-PFLRNVSFSSVDLDQLARERPELLRELLREVLELLEAGVL--KPLPPTVVPS--AS  274 (293)
T ss_pred             ccCceEEEeeccccccCCccchh-hhccCCeEEEEeHHHHhhhChHHHHHHHHHHHHHHHCCCc--ccCCCeeech--hh
Confidence            999999998754321  111111 1223344333211     1     2356788899999988  4556667777  89


Q ss_pred             HHHHHHHHhcCCCceEEEE
Q 017868          345 VEEAFETSARGGTAIKVMF  363 (365)
Q Consensus       345 ~~~a~~~~~~~~~~gk~vi  363 (365)
                      +.++++.+..+...+|+++
T Consensus       275 ~~~a~~~~~~~~~~~~ivv  293 (293)
T cd05195         275 EIDAFRLMQSGKHIGKVVL  293 (293)
T ss_pred             HHHHHHHHhcCCCCceecC
Confidence            9999999998888888774

Putative enoyl reductase of polyketide synthase. Polyketide synthases produce polyketides in step by step mechanism that is similar to fatty acid synthesis. Enoyl reductase reduces a double to single bond. Erythromycin is one example of a polyketide generated by 3 complex enzymes (megasynthases). 2-enoyl thioester reductase (ETR) catalyzes the NADPH-dependent dependent conversion of trans-2-enoyl acyl carrier protein/coenzyme A (ACP/CoA) to acyl-(ACP/CoA) in fatty acid synthesis. 2-enoyl thioester reductase activity has been linked in Candida tropicalis as essential in maintaining mitiochondrial respiratory function. This ETR family is a part of the medium chain dehydrogenase/reductase family, but lack the zinc coordination sites characteristic of the alcohol dehydrogenases in this family. NAD(P)(H)-dependent oxidoreductases are the major enzymes in the interconversion of alcohols and aldehydes or ketones. Alcohol dehydrogenase

>cd08255 2-desacetyl-2-hydroxyethyl_bacteriochlorophyllide_like 2-desacetyl-2-hydroxyethyl bacteriochlorophyllide and other MDR family members

Probab=99.96  E-value=7.8e-28  Score=214.41  Aligned_cols=247  Identities=29%  Similarity=0.400  Sum_probs=196.2

Q ss_pred             ccCCCCcccCccceEEEEEeCCCCCCCCCCCEEEEcCCcCCCCCccccCCCCCCCCCccccccCCCCcceeeEEeecCCc
Q 017868           69 FVVKEPMVIGHECAGVIEKVGSEVKTLVPGDRVALEPGISCWRCDHCKGGRYNLCPEMKFFATPPVHGSLANQVVHPADL  148 (365)
Q Consensus        69 ~~~~~p~~~G~e~~G~V~~vG~~v~~~~~Gd~V~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~v~~~~  148 (365)
                      ++..+|.++|+|++|+|+++|+++++|++||+|+++                               +.|++|++++.+.
T Consensus        16 ~~~~~p~v~g~e~~G~V~~vG~~v~~~~~Gd~V~~~-------------------------------~~~~~~~~v~~~~   64 (277)
T cd08255          16 EKLPLPLPPGYSSVGRVVEVGSGVTGFKPGDRVFCF-------------------------------GPHAERVVVPANL   64 (277)
T ss_pred             ccCcCCcccCcceeEEEEEeCCCCCCCCCCCEEEec-------------------------------CCcceEEEcCHHH
Confidence            446688999999999999999999999999999875                               4689999999999


Q ss_pred             eEECCCCCCcchhccchhhHHHHHHHHhcCCCCCCEEEEEcCCHHHHHHHHHHHHHCCCCeEEEEeCChhHHHHHHHcC-
Q 017868          149 CFKLPDNVSLEEGAMCEPLSVGLHACRRANIGPETNVLIMGAGPIGLVTMLGAPRAFGAPRIVIVDVDDYRLSVAKEIG-  227 (365)
Q Consensus       149 ~~~iP~~~~~~~a~~~~~~~~a~~~~~~~~~~~g~~vlI~G~g~~G~~ai~~l~~~~g~~~vi~v~~~~~~~~~~~~~g-  227 (365)
                      ++++|+++++++++.+.++.+||++++.+++++|+++||+|+|.+|+++++ +++.+|+++++++++++++.++++++| 
T Consensus        65 ~~~ip~~l~~~~aa~~~~~~ta~~~~~~~~~~~g~~vlI~g~g~vg~~~i~-~a~~~g~~~vi~~~~~~~~~~~~~~~g~  143 (277)
T cd08255          65 LVPLPDGLPPERAALTALAATALNGVRDAEPRLGERVAVVGLGLVGLLAAQ-LAKAAGAREVVGVDPDAARRELAEALGP  143 (277)
T ss_pred             eeECcCCCCHHHhHHHHHHHHHHHHHHhcCCCCCCEEEEECCCHHHHHHHH-HHHHcCCCcEEEECCCHHHHHHHHHcCC
Confidence            999999999988887777888999988888999999999988999999999 999999965888888999999999999 


Q ss_pred             CCEEEeCCCCcccHHHHHHHHHHHhCCCceEEEeCCCCHHHHHHHHHhcccCCEEEEEccCCCCccccchHhhhcCcEEE
Q 017868          228 ADNIVKVSTNLQDIAEEVEKIQKAMGTGIDVSFDCAGLNKTMSTALGATCAGGKVCLVGMGHHEMTVPLTPAAVREVDVV  307 (365)
Q Consensus       228 ~~~~~~~~~~~~~~~~~i~~~~~~~~~~~d~vid~~g~~~~~~~~~~~l~~~G~~~~~g~~~~~~~~~~~~~~~~~~~i~  307 (365)
                      ++.+.....          ..  ..+.++|++||+++........+++++++|+++.+|............+..+..++.
T Consensus       144 ~~~~~~~~~----------~~--~~~~~~d~vl~~~~~~~~~~~~~~~l~~~g~~~~~g~~~~~~~~~~~~~~~~~~~~~  211 (277)
T cd08255         144 ADPVAADTA----------DE--IGGRGADVVIEASGSPSALETALRLLRDRGRVVLVGWYGLKPLLLGEEFHFKRLPIR  211 (277)
T ss_pred             Cccccccch----------hh--hcCCCCCEEEEccCChHHHHHHHHHhcCCcEEEEEeccCCCccccHHHHHhccCeEE
Confidence            444332111          01  125689999999887778889999999999999998643331111122344454555


Q ss_pred             eeccc-------------CCcHHHHHHHHHcCCCCCCCceEEEecCChhhHHHHHHHHhcC-CCceEEEE
Q 017868          308 GVFRY-------------KNTWPLCLELLRSGKIDVKPLVTHRFGFSQKEVEEAFETSARG-GTAIKVMF  363 (365)
Q Consensus       308 ~~~~~-------------~~~~~~~~~~l~~g~~~~~~~~~~~~~~~~~~~~~a~~~~~~~-~~~gk~vi  363 (365)
                      +....             .+.+++++++++++.+  .+...+.|++  +++++|++.+.++ ....|+++
T Consensus       212 ~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~l--~~~~~~~~~~--~~~~~a~~~~~~~~~~~~k~~~  277 (277)
T cd08255         212 SSQVYGIGRYDRPRRWTEARNLEEALDLLAEGRL--EALITHRVPF--EDAPEAYRLLFEDPPECLKVVL  277 (277)
T ss_pred             eecccccccccccccccccccHHHHHHHHHcCCc--cccccCccCH--HHHHHHHHHHHcCCccceeeeC
Confidence            54321             2568899999999987  4446677777  9999999998877 56677764

This subgroup of the medium chain dehydrogenases/reductase (MDR)/zinc-dependent alcohol dehydrogenase-like family has members identified as 2-desacetyl-2-hydroxyethyl bacteriochlorophyllide A dehydrogenase and alcohol dehydrogenases. The medium chain dehydrogenases/reductase (MDR)/zinc-dependent alcohol dehydrogenase-like family, which contains the zinc-dependent alcohol dehydrogenase (ADH-Zn) and related proteins, is a diverse group of proteins related to the first identified member, class I mammalian ADH. MDRs display a broad range of activities and are distinguished from the smaller short chain dehydrogenases (~ 250 amino acids vs. the ~ 350 amino acids of the MDR). The MDR proteins have 2 domains: a C-terminal NAD(P) binding-Rossmann fold domain of a beta-alpha form and an N-terminal catalytic domain with distant homology to GroES. The MD

>smart00829 PKS_ER Enoylreductase

Probab=99.96  E-value=1.7e-27  Score=212.83  Aligned_cols=271  Identities=28%  Similarity=0.399  Sum_probs=212.6

Q ss_pred             EEEeeeeeCcccHhhhhccccCCccCCCCcccCccceEEEEEeCCCCCCCCCCCEEEEcCCcCCCCCccccCCCCCCCCC
Q 017868           46 VRMKAVGICGSDVHYLKTLRCADFVVKEPMVIGHECAGVIEKVGSEVKTLVPGDRVALEPGISCWRCDHCKGGRYNLCPE  125 (365)
Q Consensus        46 I~v~~~~l~~~D~~~~~g~~~~~~~~~~p~~~G~e~~G~V~~vG~~v~~~~~Gd~V~~~~~~~~~~~~~~~~~~~~~~~~  125 (365)
                      |||.++++|+.|+..+.|..      ..|.++|+|++|+|+.+|++++.|++||+|++.                     
T Consensus         2 i~v~~~~i~~~d~~~~~g~~------~~~~~~g~e~~G~v~~~G~~~~~~~~Gd~V~~~---------------------   54 (288)
T smart00829        2 VEVRAAGLNFRDVLIALGLL------PGEAVLGGECAGVVTRVGPGVTGLAVGDRVMGL---------------------   54 (288)
T ss_pred             eeEEEEecCHHHHHHhcCCC------CCCCCCCceeEEEEEeeCCCCcCCCCCCEEEEE---------------------
Confidence            89999999999999887642      236789999999999999999999999999875                     


Q ss_pred             ccccccCCCCcceeeEEeecCCceEECCCCCCcchhccch-hhHHHHHHH-HhcCCCCCCEEEEEcC-CHHHHHHHHHHH
Q 017868          126 MKFFATPPVHGSLANQVVHPADLCFKLPDNVSLEEGAMCE-PLSVGLHAC-RRANIGPETNVLIMGA-GPIGLVTMLGAP  202 (365)
Q Consensus       126 ~~~~~~~~~~g~~~~~~~v~~~~~~~iP~~~~~~~a~~~~-~~~~a~~~~-~~~~~~~g~~vlI~G~-g~~G~~ai~~l~  202 (365)
                              ..|+|++|+.++.+.++++|+++++.+++.++ ...++++++ +...+.+|++|+|+|+ |.+|+++++ ++
T Consensus        55 --------~~g~~~~~~~~~~~~~~~~p~~~~~~~~~~~~~~~~~a~~~~~~~~~~~~g~~vlv~g~~~~~g~~~~~-~a  125 (288)
T smart00829       55 --------APGSFATYVRTDARLVVPIPDGLSFEEAATVPVVFLTAYYALVDLARLRPGESVLIHAAAGGVGQAAIQ-LA  125 (288)
T ss_pred             --------cCCceeeEEEccHHHeEECCCCCCHHHHHhchHHHHHHHHHHHHHhCCCCCCEEEEecCCcHHHHHHHH-HH
Confidence                    23899999999999999999999999988876 778899887 5688999999999985 999999999 99


Q ss_pred             HHCCCCeEEEEeCChhHHHHHHHcCC--CEEEeCCCCcccHHHHHHHHHHHhCCCceEEEeCCCCHHHHHHHHHhcccCC
Q 017868          203 RAFGAPRIVIVDVDDYRLSVAKEIGA--DNIVKVSTNLQDIAEEVEKIQKAMGTGIDVSFDCAGLNKTMSTALGATCAGG  280 (365)
Q Consensus       203 ~~~g~~~vi~v~~~~~~~~~~~~~g~--~~~~~~~~~~~~~~~~i~~~~~~~~~~~d~vid~~g~~~~~~~~~~~l~~~G  280 (365)
                      +..|+ .++++++++++.+.++++|+  +.++++.  ..++.+.+.+...  +.++|+++|++|. ......+++++++|
T Consensus       126 ~~~g~-~v~~~~~~~~~~~~~~~~g~~~~~~~~~~--~~~~~~~~~~~~~--~~~~d~vi~~~~~-~~~~~~~~~l~~~g  199 (288)
T smart00829      126 QHLGA-EVFATAGSPEKRDFLRELGIPDDHIFSSR--DLSFADEILRATG--GRGVDVVLNSLAG-EFLDASLRCLAPGG  199 (288)
T ss_pred             HHcCC-EEEEEeCCHHHHHHHHHcCCChhheeeCC--CccHHHHHHHHhC--CCCcEEEEeCCCH-HHHHHHHHhccCCc
Confidence            99999 57888888999999999998  5665542  3456565655432  5689999999995 57788999999999


Q ss_pred             EEEEEccCCC--CccccchHhhhcCcEEEeecc---------cCCcHHHHHHHHHcCCCCCCCceEEEecCChhhHHHHH
Q 017868          281 KVCLVGMGHH--EMTVPLTPAAVREVDVVGVFR---------YKNTWPLCLELLRSGKIDVKPLVTHRFGFSQKEVEEAF  349 (365)
Q Consensus       281 ~~~~~g~~~~--~~~~~~~~~~~~~~~i~~~~~---------~~~~~~~~~~~l~~g~~~~~~~~~~~~~~~~~~~~~a~  349 (365)
                      +++.+|....  ....+... ..+++++.+...         ..+.+.+++++++++.+.  +...+.|++  +++.+++
T Consensus       200 ~~v~~g~~~~~~~~~~~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~--~~~~~~~~~--~~~~~~~  274 (288)
T smart00829      200 RFVEIGKRDIRDNSQLGMAP-FRRNVSYHAVDLDALEEGPDRIRELLAEVLELFAEGVLR--PLPVTVFPI--SDVEDAF  274 (288)
T ss_pred             EEEEEcCcCCccccccchhh-hcCCceEEEEEHHHhhcChHHHHHHHHHHHHHHHCCCcc--CcCceEEcH--HHHHHHH
Confidence            9999975431  11112111 234444444321         123467788899888874  335577877  9999999


Q ss_pred             HHHhcCCCceEEEE
Q 017868          350 ETSARGGTAIKVMF  363 (365)
Q Consensus       350 ~~~~~~~~~gk~vi  363 (365)
                      +.+..+...+|+++
T Consensus       275 ~~~~~~~~~~~ivv  288 (288)
T smart00829      275 RYMQQGKHIGKVVL  288 (288)
T ss_pred             HHHhcCCCcceEeC
Confidence            99998877788764

Enoylreductase in Polyketide synthases.

>KOG1202 consensus Animal-type fatty acid synthase and related proteins [Lipid transport and metabolism]

Probab=99.95  E-value=4.7e-27  Score=226.11  Aligned_cols=294  Identities=19%  Similarity=0.218  Sum_probs=234.4

Q ss_pred             CceEEEEecCC---CCCCCcEEEEEeeeeeCcccHhhhhccccCCcc----CCCCcccCccceEEEEEeCCCCCCCCCCC
Q 017868           27 NTLKIQPFELP---SLGPYDVLVRMKAVGICGSDVHYLKTLRCADFV----VKEPMVIGHECAGVIEKVGSEVKTLVPGD   99 (365)
Q Consensus        27 ~~l~~~~~~~p---~~~~~eVlI~v~~~~l~~~D~~~~~g~~~~~~~----~~~p~~~G~e~~G~V~~vG~~v~~~~~Gd   99 (365)
                      ..+++.+.|..   +..++.=+.-|.|+.+|.+|+.+..|+...+..    ....+++|.||+|+-          +-|.
T Consensus      1427 sSlrWies~~~~a~~~~~~~e~CtVYYAplNFRDiMLasGkL~~DAiPG~~a~qdclLGmEFsGRd----------~~Gr 1496 (2376)
T KOG1202|consen 1427 SSLRWIESPLRHAQPTCPGLELCTVYYAPLNFRDIMLASGKLSPDAIPGDLASQDCLLGMEFSGRD----------ASGR 1496 (2376)
T ss_pred             cceeeeecchhhcCCCCCCCceeEEEeccccHHHHHHhcCCCCcccCCCccchhhheeceeecccc----------CCCc
Confidence            58889888865   347777899999999999999999997654421    233578999999984          4599


Q ss_pred             EEEEcCCcCCCCCccccCCCCCCCCCccccccCCCCcceeeEEeecCCceEECCCCCCcchhccch-hhHHHHHHH-Hhc
Q 017868          100 RVALEPGISCWRCDHCKGGRYNLCPEMKFFATPPVHGSLANQVVHPADLCFKLPDNVSLEEGAMCE-PLSVGLHAC-RRA  177 (365)
Q Consensus       100 ~V~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~v~~~~~~~iP~~~~~~~a~~~~-~~~~a~~~~-~~~  177 (365)
                      ||.++.+                            .-++++.+.++.++++.+|++...++|+++| .++||||++ .++
T Consensus      1497 RvM~mvp----------------------------AksLATt~l~~rd~lWevP~~WTleeAstVP~VYsTaYYALVvRG 1548 (2376)
T KOG1202|consen 1497 RVMGMVP----------------------------AKSLATTVLASRDFLWEVPSKWTLEEASTVPVVYSTAYYALVVRG 1548 (2376)
T ss_pred             EEEEeee----------------------------hhhhhhhhhcchhhhhhCCcccchhhcccCceEeeeehhhhhhhc
Confidence            9988732                            3568889999999999999999999999998 788999997 689


Q ss_pred             CCCCCCEEEEE-cCCHHHHHHHHHHHHHCCCCeEEEEeCChhHHHHHHHcC--CCEEEeCCCCcccHHHHHHHHHHHhCC
Q 017868          178 NIGPETNVLIM-GAGPIGLVTMLGAPRAFGAPRIVIVDVDDYRLSVAKEIG--ADNIVKVSTNLQDIAEEVEKIQKAMGT  254 (365)
Q Consensus       178 ~~~~g~~vlI~-G~g~~G~~ai~~l~~~~g~~~vi~v~~~~~~~~~~~~~g--~~~~~~~~~~~~~~~~~i~~~~~~~~~  254 (365)
                      ..++|+++||+ |+|++|+++|. +|.+.|+ .|+++..+.+|++++.++-  ......-++++.+|...+..  .+.|+
T Consensus      1549 ~mkkGekiLIHaGsGGVGQAAIa-iALa~G~-~VFTTVGSaEKRefL~~rFPqLqe~~~~NSRdtsFEq~vl~--~T~Gr 1624 (2376)
T KOG1202|consen 1549 QMKKGEKILIHAGSGGVGQAAIA-IALAHGC-TVFTTVGSAEKREFLLKRFPQLQETNFANSRDTSFEQHVLW--HTKGR 1624 (2376)
T ss_pred             cccCCcEEEEecCCCchhHHHHH-HHHHcCC-EEEEecCcHHHHHHHHHhchhhhhhcccccccccHHHHHHH--HhcCC
Confidence            99999999999 56999999999 8889999 5677778899999876543  22222234666788777754  44599


Q ss_pred             CceEEEeCCCCHHHHHHHHHhcccCCEEEEEccCCCCc-cccchHhhhcCcEEEeeccc------CCcHHHHHHHHHcCC
Q 017868          255 GIDVSFDCAGLNKTMSTALGATCAGGKVCLVGMGHHEM-TVPLTPAAVREVDVVGVFRY------KNTWPLCLELLRSGK  327 (365)
Q Consensus       255 ~~d~vid~~g~~~~~~~~~~~l~~~G~~~~~g~~~~~~-~~~~~~~~~~~~~i~~~~~~------~~~~~~~~~~l~~g~  327 (365)
                      |+|+|++.... +.++.+++||+.+|++..+|-...+. .+.-.....++.+++|....      .++|.++..++++|.
T Consensus      1625 GVdlVLNSLae-EkLQASiRCLa~~GRFLEIGKfDLSqNspLGMavfLkNvsfHGiLLDsvmege~e~~~ev~~Lv~eGI 1703 (2376)
T KOG1202|consen 1625 GVDLVLNSLAE-EKLQASIRCLALHGRFLEIGKFDLSQNSPLGMAVFLKNVSFHGILLDSVMEGEEEMWREVAALVAEGI 1703 (2376)
T ss_pred             CeeeehhhhhH-HHHHHHHHHHHhcCeeeeecceecccCCcchhhhhhcccceeeeehhhhhcCcHHHHHHHHHHHHhhh
Confidence            99999998875 58899999999999999998433322 33334467788888886532      457888888888875


Q ss_pred             CC--CCCceEEEecCChhhHHHHHHHHhcCCCceEEEEeC
Q 017868          328 ID--VKPLVTHRFGFSQKEVEEAFETSARGGTAIKVMFNL  365 (365)
Q Consensus       328 ~~--~~~~~~~~~~~~~~~~~~a~~~~~~~~~~gk~vi~~  365 (365)
                      -.  ..|+.+++|+-  .++++||+++.++++.||+|+.+
T Consensus      1704 ksGvV~PL~ttvF~~--~qvE~AFRfMasGKHIGKVvikv 1741 (2376)
T KOG1202|consen 1704 KSGVVRPLPTTVFHG--QQVEDAFRFMASGKHIGKVVIKV 1741 (2376)
T ss_pred             ccCceeccccccccH--HHHHHHHHHHhccCccceEEEEE
Confidence            53  58888888877  99999999999999999999874

>KOG1196 consensus Predicted NAD-dependent oxidoreductase [General function prediction only]

Probab=99.94  E-value=6.6e-24  Score=178.97  Aligned_cols=293  Identities=17%  Similarity=0.191  Sum_probs=218.2

Q ss_pred             CceEE--EEecCC-CCCCCcEEEEEeeeeeCcccHhhhhccccCCccCCCCcccC----ccceEEEEEeCCCCCCCCCCC
Q 017868           27 NTLKI--QPFELP-SLGPYDVLVRMKAVGICGSDVHYLKTLRCADFVVKEPMVIG----HECAGVIEKVGSEVKTLVPGD   99 (365)
Q Consensus        27 ~~l~~--~~~~~p-~~~~~eVlI~v~~~~l~~~D~~~~~g~~~~~~~~~~p~~~G----~e~~G~V~~vG~~v~~~~~Gd   99 (365)
                      ..+.+  .+++++ ++++++|+||..|.+.+|.-...+.--....  .-.|+.+|    ..++|.|++.  +-+++++||
T Consensus        20 ~d~~~~~~~~el~~~~~s~~vlvknlYLS~DPymR~rM~~~~~~~--y~~~~~~G~pi~g~GV~kVi~S--~~~~~~~GD   95 (343)
T KOG1196|consen   20 SDFEFTTTTVELRVPLGSGEVLVKNLYLSCDPYMRIRMGKPDPSD--YAPPYEPGKPIDGFGVAKVIDS--GHPNYKKGD   95 (343)
T ss_pred             ccceeeeeeecccCCCCCccEEeEeeeecCCHHHHhhccCCCccc--ccCcccCCcEecCCceEEEEec--CCCCCCcCc
Confidence            34444  345544 4689999999999999987655443221111  22344444    2678999885  557799999


Q ss_pred             EEEEcCCcCCCCCccccCCCCCCCCCccccccCCCCcceeeEEeecCCce--EECCC--CCCcch--hccchhhHHHHHH
Q 017868          100 RVALEPGISCWRCDHCKGGRYNLCPEMKFFATPPVHGSLANQVVHPADLC--FKLPD--NVSLEE--GAMCEPLSVGLHA  173 (365)
Q Consensus       100 ~V~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~v~~~~~--~~iP~--~~~~~~--a~~~~~~~~a~~~  173 (365)
                      .|.+.                               =+|.||.+++....  +++|.  +.++..  .++=++..|||..
T Consensus        96 ~v~g~-------------------------------~gWeeysii~~~~~~~~ki~~~~~~pLs~ylg~lGm~glTAy~G  144 (343)
T KOG1196|consen   96 LVWGI-------------------------------VGWEEYSVITPNDLEHFKIQHPTDVPLSYYLGLLGMPGLTAYAG  144 (343)
T ss_pred             eEEEe-------------------------------ccceEEEEecCcchhcccCCCCCccCHhhhhhccCCchhHHHHH
Confidence            99876                               37999999987544  44443  333333  3333588899998


Q ss_pred             H-HhcCCCCCCEEEEEcC-CHHHHHHHHHHHHHCCCCeEEEEeCChhHHHHHHH-cCCCEEEeCCCCcccHHHHHHHHHH
Q 017868          174 C-RRANIGPETNVLIMGA-GPIGLVTMLGAPRAFGAPRIVIVDVDDYRLSVAKE-IGADNIVKVSTNLQDIAEEVEKIQK  250 (365)
Q Consensus       174 ~-~~~~~~~g~~vlI~G~-g~~G~~ai~~l~~~~g~~~vi~v~~~~~~~~~~~~-~g~~~~~~~~~~~~~~~~~i~~~~~  250 (365)
                      + ++...++|++|+|.|| |++|+++.| +|+.+|+ .|++...+++|.++++. +|.+..++|.+. .+..+.+++.  
T Consensus       145 f~ei~~pk~geTv~VSaAsGAvGql~GQ-~Ak~~Gc-~VVGsaGS~EKv~ll~~~~G~d~afNYK~e-~~~~~aL~r~--  219 (343)
T KOG1196|consen  145 FYEICSPKKGETVFVSAASGAVGQLVGQ-FAKLMGC-YVVGSAGSKEKVDLLKTKFGFDDAFNYKEE-SDLSAALKRC--  219 (343)
T ss_pred             HHHhcCCCCCCEEEEeeccchhHHHHHH-HHHhcCC-EEEEecCChhhhhhhHhccCCccceeccCc-cCHHHHHHHh--
Confidence            7 6788999999999987 999999999 9999999 79999999999998855 799999998653 3677777764  


Q ss_pred             HhCCCceEEEeCCCCHHHHHHHHHhcccCCEEEEEccCC---CCcc---ccchHhhhcCcEEEeeccc------CCcHHH
Q 017868          251 AMGTGIDVSFDCAGLNKTMSTALGATCAGGKVCLVGMGH---HEMT---VPLTPAAVREVDVVGVFRY------KNTWPL  318 (365)
Q Consensus       251 ~~~~~~d~vid~~g~~~~~~~~~~~l~~~G~~~~~g~~~---~~~~---~~~~~~~~~~~~i~~~~~~------~~~~~~  318 (365)
                       .+.++|+.||.+|+. +++..+.-|+..|+++.+|+-+   .+.+   ..+..+..|++++.++...      .+.+..
T Consensus       220 -~P~GIDiYfeNVGG~-~lDavl~nM~~~gri~~CG~ISqYN~~~~~~~~~l~~ii~Kr~~iqgflv~d~~d~~~k~ld~  297 (343)
T KOG1196|consen  220 -FPEGIDIYFENVGGK-MLDAVLLNMNLHGRIAVCGMISQYNLENPEGLHNLSTIIYKRIRIQGFLVSDYLDKYPKFLDF  297 (343)
T ss_pred             -CCCcceEEEeccCcH-HHHHHHHhhhhccceEeeeeehhccccCCccccchhhheeeeEEeeeEEeechhhhhHHHHHH
Confidence             478999999999986 8899999999999999998532   1222   2233467899999886543      456678


Q ss_pred             HHHHHHcCCCCCCCceEEEecCChhhHHHHHHHHhcCCCceEEEEeC
Q 017868          319 CLELLRSGKIDVKPLVTHRFGFSQKEVEEAFETSARGGTAIKVMFNL  365 (365)
Q Consensus       319 ~~~~l~~g~~~~~~~~~~~~~~~~~~~~~a~~~~~~~~~~gk~vi~~  365 (365)
                      +..++++|+|.....+.  -.|  +....|+.-+.+++..||+++.+
T Consensus       298 l~~~ikegKI~y~edi~--~Gl--en~P~A~vglf~GkNvGKqiv~v  340 (343)
T KOG1196|consen  298 LLPYIKEGKITYVEDIA--DGL--ENGPSALVGLFHGKNVGKQLVKV  340 (343)
T ss_pred             HHHHHhcCceEEehhHH--HHH--hccHHHHHHHhccCcccceEEEe
Confidence            88999999995443332  236  88999999999999999999864

>PF08240 ADH_N: Alcohol dehydrogenase GroES-like domain; InterPro: IPR013154 This is the catalytic domain of alcohol dehydrogenases (1

Probab=99.90  E-value=8.1e-24  Score=160.60  Aligned_cols=109  Identities=39%  Similarity=0.702  Sum_probs=97.1

Q ss_pred             CCcEEEEEeeeeeCcccHhhhhccccCCccCCCCcccCccceEEEEEeCCCCCCCCCCCEEEEcCCcCCCCCccccCCCC
Q 017868           41 PYDVLVRMKAVGICGSDVHYLKTLRCADFVVKEPMVIGHECAGVIEKVGSEVKTLVPGDRVALEPGISCWRCDHCKGGRY  120 (365)
Q Consensus        41 ~~eVlI~v~~~~l~~~D~~~~~g~~~~~~~~~~p~~~G~e~~G~V~~vG~~v~~~~~Gd~V~~~~~~~~~~~~~~~~~~~  120 (365)
                      |+||+|||+++++|++|++.+.|.  .......|.++|||++|+|+++|+++++|++||||++.+...|+.|++|..+.+
T Consensus         1 P~eVlVkv~a~gic~~D~~~~~g~--~~~~~~~p~i~GhE~~G~V~~vG~~v~~~~~Gd~V~~~~~~~~~~c~~c~~~~~   78 (109)
T PF08240_consen    1 PGEVLVKVRAAGICGSDLHIREGG--PPPPPKFPLILGHEGVGVVVAVGPGVTDFKVGDRVVVSPNIGCGECEYCLSGRP   78 (109)
T ss_dssp             TTEEEEEEEEEEE-HHHHHHHTTS--SSSTSSSSEES-SEEEEEEEEESTTTTSSGTT-EEEEESEEETSSSHHHHTTTG
T ss_pred             CCEEEEEEEEeeeCHHHHHHHhhc--cccCCCCCcccccceeeeeeeeccccccccccceeeeecccCccCchhhcCCcc
Confidence            789999999999999999999874  223367899999999999999999999999999999999999999999999999


Q ss_pred             CCCCCccccccCCCCcceeeEEeecCCceEEC
Q 017868          121 NLCPEMKFFATPPVHGSLANQVVHPADLCFKL  152 (365)
Q Consensus       121 ~~~~~~~~~~~~~~~g~~~~~~~v~~~~~~~i  152 (365)
                      ++|++...++.. .+|+|+||+.+++++++++
T Consensus        79 ~~c~~~~~~g~~-~~G~~aey~~v~~~~~~~v  109 (109)
T PF08240_consen   79 NLCPNPEVLGLG-LDGGFAEYVVVPARNLVPV  109 (109)
T ss_dssp             GGTTTBEETTTS-STCSSBSEEEEEGGGEEEE
T ss_pred             ccCCCCCEeEcC-CCCcccCeEEEehHHEEEC
Confidence            999988888875 7899999999999999875

1.1.1 from EC). Many of them contain an inserted zinc binding domain. This domain has a GroES-like structure; a name derived from the superfamily of proteins with a GroES fold. Proteins with a GroES fold structure have a highly conserved hydrophobic core and a glycyl-aspartate dipeptide which is thought to maintain the fold [, ].; GO: 0016491 oxidoreductase activity, 0055114 oxidation-reduction process; PDB: 1YKF_D 2NVB_A 3FSR_D 1BXZ_B 3FTN_A 3MEQ_D 3UOG_B 3HZZ_B 4DVJ_A 1P0F_A ....

>PF00107 ADH_zinc_N: Zinc-binding dehydrogenase; InterPro: IPR013149 Alcohol dehydrogenase (1

Probab=99.68  E-value=8.5e-16  Score=120.62  Aligned_cols=128  Identities=27%  Similarity=0.561  Sum_probs=112.4

Q ss_pred             HHHHHHHHHHHHHCCCCeEEEEeCChhHHHHHHHcCCCEEEeCCCCcccHHHHHHHHHHHhCCCceEEEeCCCCHHHHHH
Q 017868          192 PIGLVTMLGAPRAFGAPRIVIVDVDDYRLSVAKEIGADNIVKVSTNLQDIAEEVEKIQKAMGTGIDVSFDCAGLNKTMST  271 (365)
Q Consensus       192 ~~G~~ai~~l~~~~g~~~vi~v~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~i~~~~~~~~~~~d~vid~~g~~~~~~~  271 (365)
                      ++|++++| +|+..|+ +|++++++++|+++++++|++.++++++  .++.+.+++++.  +.++|+||||+|....++.
T Consensus         1 ~vG~~a~q-~ak~~G~-~vi~~~~~~~k~~~~~~~Ga~~~~~~~~--~~~~~~i~~~~~--~~~~d~vid~~g~~~~~~~   74 (130)
T PF00107_consen    1 GVGLMAIQ-LAKAMGA-KVIATDRSEEKLELAKELGADHVIDYSD--DDFVEQIRELTG--GRGVDVVIDCVGSGDTLQE   74 (130)
T ss_dssp             HHHHHHHH-HHHHTTS-EEEEEESSHHHHHHHHHTTESEEEETTT--SSHHHHHHHHTT--TSSEEEEEESSSSHHHHHH
T ss_pred             ChHHHHHH-HHHHcCC-EEEEEECCHHHHHHHHhhcccccccccc--cccccccccccc--cccceEEEEecCcHHHHHH
Confidence            58999999 9999995 8999999999999999999999988654  568888888753  4699999999998889999


Q ss_pred             HHHhcccCCEEEEEccCC-CCccccchHhhhcCcEEEeecccC-CcHHHHHHHHHc
Q 017868          272 ALGATCAGGKVCLVGMGH-HEMTVPLTPAAVREVDVVGVFRYK-NTWPLCLELLRS  325 (365)
Q Consensus       272 ~~~~l~~~G~~~~~g~~~-~~~~~~~~~~~~~~~~i~~~~~~~-~~~~~~~~~l~~  325 (365)
                      ++.+++++|+++.+|... ....++...++.+++++.+++.+. ++++++++++.+
T Consensus        75 ~~~~l~~~G~~v~vg~~~~~~~~~~~~~~~~~~~~i~g~~~~~~~~~~~~~~~la~  130 (130)
T PF00107_consen   75 AIKLLRPGGRIVVVGVYGGDPISFNLMNLMFKEITIRGSWGGSPEDFQEALQLLAQ  130 (130)
T ss_dssp             HHHHEEEEEEEEEESSTSTSEEEEEHHHHHHTTEEEEEESSGGHHHHHHHHHHHH-
T ss_pred             HHHHhccCCEEEEEEccCCCCCCCCHHHHHhCCcEEEEEccCCHHHHHHHHHHhcC
Confidence            999999999999999876 566788888999999999999885 889999988764

1.1.1 from EC) (ADH) catalyzes the reversible oxidation of alcohols to their corresponding acetaldehyde or ketone with the concomitant reduction of NAD: alcohol + NAD = aldehyde or ketone + NADH Currently three structurally and catalytically different types of alcohol dehydrogenases are known: Zinc-containing 'long-chain' alcohol dehydrogenases. Insect-type, or 'short-chain' alcohol dehydrogenases. Iron-containing alcohol dehydrogenases. Zinc-containing ADH's [, ] are dimeric or tetrameric enzymes that bind two atoms of zinc per subunit. One of the zinc atom is essential for catalytic activity while the other is not. Both zinc atoms are coordinated by either cysteine or histidine residues; the catalytic zinc is coordinated by two cysteines and one histidine. Zinc-containing ADH's are found in bacteria, mammals, plants, and in fungi. In many species there is more than one isozyme (for example, humans have at least six isozymes, yeast have three, etc.). A number of other zinc-dependent dehydrogenases are closely related to zinc ADH [] and are included in this family. Sorbitol dehydrogenase (1.1.1.14 from EC) L-threonine 3-dehydrogenase (1.1.1.103 from EC) Glutathione-dependent formaldehyde dehydrogenase (1.1.1.284 from EC) Mannitol dehydrogenase (1.1.1.255 from EC) In addition, this family includes NADP-dependent quinone oxidoreductase (1.6.5.5 from EC), an enzyme found in bacteria (gene qor), in yeast and in mammals where, in some species such as rodents, it has been recruited as an eye lens protein and is known as zeta-crystallin []. The sequence of quinone oxidoreductase is distantly related to that other zinc-containing alcohol dehydrogenases and it lacks the zinc-ligand residues. The torpedo fish and mammalian synaptic vesicle membrane protein vat-1 is related to qor. This entry represents the cofactor-binding domain of these enzymes, which is normally found towards the C terminus. Structural studies indicate that it forms a classical Rossman fold that reversibly binds NAD(H) [, , ].; GO: 0008270 zinc ion binding, 0016491 oxidoreductase activity, 0055114 oxidation-reduction process; PDB: 3PI7_A 3COS_D 1VJ1_A 2ZB3_A 1PIW_B 1Q1N_A 1PS0_A 2EER_B 3KRT_A 1ZSY_A ....

>cd00401 AdoHcyase S-adenosyl-L-homocysteine hydrolase (AdoHycase) catalyzes the hydrolysis of S-adenosyl-L-homocysteine (AdoHyc) to form adenosine (Ado) and homocysteine (Hcy)

Probab=99.38  E-value=2.4e-11  Score=111.82  Aligned_cols=173  Identities=18%  Similarity=0.248  Sum_probs=134.1

Q ss_pred             HHHHH-HhcC-CCCCCEEEEEcCCHHHHHHHHHHHHHCCCCeEEEEeCChhHHHHHHHcCCCEEEeCCCCcccHHHHHHH
Q 017868          170 GLHAC-RRAN-IGPETNVLIMGAGPIGLVTMLGAPRAFGAPRIVIVDVDDYRLSVAKEIGADNIVKVSTNLQDIAEEVEK  247 (365)
Q Consensus       170 a~~~~-~~~~-~~~g~~vlI~G~g~~G~~ai~~l~~~~g~~~vi~v~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~i~~  247 (365)
                      ++.++ +..+ .-+|++|+|.|+|.+|+.+++ .++.+|+ +|++++.++.|.+.++.+|+..+ +       ..    +
T Consensus       188 ~~~~i~r~t~~~l~GktVvViG~G~IG~~va~-~ak~~Ga-~ViV~d~d~~R~~~A~~~G~~~~-~-------~~----e  253 (413)
T cd00401         188 LIDGIKRATDVMIAGKVAVVAGYGDVGKGCAQ-SLRGQGA-RVIVTEVDPICALQAAMEGYEVM-T-------ME----E  253 (413)
T ss_pred             hHHHHHHhcCCCCCCCEEEEECCCHHHHHHHH-HHHHCCC-EEEEEECChhhHHHHHhcCCEEc-c-------HH----H
Confidence            34444 3333 468999999999999999999 8899999 58889999999999999998432 1       11    1


Q ss_pred             HHHHhCCCceEEEeCCCCHHHHHHH-HHhcccCCEEEEEccCCCCccccchHhhhcCcEEEeecccCC--cHH--HHHHH
Q 017868          248 IQKAMGTGIDVSFDCAGLNKTMSTA-LGATCAGGKVCLVGMGHHEMTVPLTPAAVREVDVVGVFRYKN--TWP--LCLEL  322 (365)
Q Consensus       248 ~~~~~~~~~d~vid~~g~~~~~~~~-~~~l~~~G~~~~~g~~~~~~~~~~~~~~~~~~~i~~~~~~~~--~~~--~~~~~  322 (365)
                      .    -.++|+||+|+|....+... +..++++|.++.+|..  +..++...+..+.+++.+++.+..  .+.  +++.+
T Consensus       254 ~----v~~aDVVI~atG~~~~i~~~~l~~mk~GgilvnvG~~--~~eId~~~L~~~el~i~g~~~~~~~~~~~~g~aI~L  327 (413)
T cd00401         254 A----VKEGDIFVTTTGNKDIITGEHFEQMKDGAIVCNIGHF--DVEIDVKGLKENAVEVVNIKPQVDRYELPDGRRIIL  327 (413)
T ss_pred             H----HcCCCEEEECCCCHHHHHHHHHhcCCCCcEEEEeCCC--CCccCHHHHHhhccEEEEccCCcceEEcCCcchhhh
Confidence            1    13689999999988777775 9999999999999854  446777778889999999887733  455  79999


Q ss_pred             HHcCCC-CCCCceEEE-----ecCChh-hHHHHHHHHhcCCC-ceEEEEe
Q 017868          323 LRSGKI-DVKPLVTHR-----FGFSQK-EVEEAFETSARGGT-AIKVMFN  364 (365)
Q Consensus       323 l~~g~~-~~~~~~~~~-----~~~~~~-~~~~a~~~~~~~~~-~gk~vi~  364 (365)
                      +.+|.+ ++.+.++|.     |+|  + |+.+++..+.+... ..|+++.
T Consensus       328 La~Grlvnl~~~~gH~~~vmd~sf--~~q~l~a~~l~~~~~~~~~kV~~~  375 (413)
T cd00401         328 LAEGRLVNLGCATGHPSFVMSNSF--TNQVLAQIELWTNRDKYEVGVYFL  375 (413)
T ss_pred             hhCcCCCCCcccCCCccceechhH--HHHHHHHHHHHhcCCcCCCcEEEC
Confidence            999999 777767666     666  7 99999998877643 3566553

The equilibrium lies far on the side of AdoHyc synthesis, but in nature the removal of Ado and Hyc is sufficiently fast, so that the net reaction is in the direction of hydrolysis. Since AdoHyc is a potent inhibitor of S-adenosyl-L-methionine dependent methyltransferases, AdoHycase plays a critical role in the modulation of the activity of various methyltransferases. The enzyme forms homooligomers of 45-50kDa subunits, each binding one molecule of NAD+.

>PRK09424 pntA NAD(P) transhydrogenase subunit alpha; Provisional

Probab=99.33  E-value=3.6e-11  Score=113.42  Aligned_cols=155  Identities=17%  Similarity=0.256  Sum_probs=113.9

Q ss_pred             CCCCCEEEEEcCCHHHHHHHHHHHHHCCCCeEEEEeCChhHHHHHHHcCCCEE-EeCCCC-----------cccHHHHHH
Q 017868          179 IGPETNVLIMGAGPIGLVTMLGAPRAFGAPRIVIVDVDDYRLSVAKEIGADNI-VKVSTN-----------LQDIAEEVE  246 (365)
Q Consensus       179 ~~~g~~vlI~G~g~~G~~ai~~l~~~~g~~~vi~v~~~~~~~~~~~~~g~~~~-~~~~~~-----------~~~~~~~i~  246 (365)
                      ..++++|+|.|+|.+|+++++ .++.+|+ .|++++.++++.+.++++|++.+ ++..+.           ..++.+..+
T Consensus       162 ~~pg~kVlViGaG~iGL~Ai~-~Ak~lGA-~V~a~D~~~~rle~aeslGA~~v~i~~~e~~~~~~gya~~~s~~~~~~~~  239 (509)
T PRK09424        162 KVPPAKVLVIGAGVAGLAAIG-AAGSLGA-IVRAFDTRPEVAEQVESMGAEFLELDFEEEGGSGDGYAKVMSEEFIKAEM  239 (509)
T ss_pred             CcCCCEEEEECCcHHHHHHHH-HHHHCCC-EEEEEeCCHHHHHHHHHcCCeEEEeccccccccccchhhhcchhHHHHHH
Confidence            468999999999999999999 9999999 69999999999999999999854 432211           112222222


Q ss_pred             HHHHHhCCCceEEEeCCCCH-----HH-HHHHHHhcccCCEEEEEccC-CCC--ccccchHhhh-cCcEEEeecccCCcH
Q 017868          247 KIQKAMGTGIDVSFDCAGLN-----KT-MSTALGATCAGGKVCLVGMG-HHE--MTVPLTPAAV-REVDVVGVFRYKNTW  316 (365)
Q Consensus       247 ~~~~~~~~~~d~vid~~g~~-----~~-~~~~~~~l~~~G~~~~~g~~-~~~--~~~~~~~~~~-~~~~i~~~~~~~~~~  316 (365)
                      +......+++|+||+|+|.+     .. ...+++.++++|.++.++.. ...  ...+...+.. +++++.|.++....+
T Consensus       240 ~~~~~~~~gaDVVIetag~pg~~aP~lit~~~v~~mkpGgvIVdvg~~~GG~~e~t~~~~~v~~~~gVti~Gv~n~P~~~  319 (509)
T PRK09424        240 ALFAEQAKEVDIIITTALIPGKPAPKLITAEMVASMKPGSVIVDLAAENGGNCELTVPGEVVVTDNGVTIIGYTDLPSRL  319 (509)
T ss_pred             HHHHhccCCCCEEEECCCCCcccCcchHHHHHHHhcCCCCEEEEEccCCCCCcccccCccceEeECCEEEEEeCCCchhH
Confidence            22111125799999999963     24 48999999999999999864 332  3333445554 899999988775444


Q ss_pred             H-HHHHHHHcCCCCCCCceE
Q 017868          317 P-LCLELLRSGKIDVKPLVT  335 (365)
Q Consensus       317 ~-~~~~~l~~g~~~~~~~~~  335 (365)
                      . ++.+++.++.+.+.+.++
T Consensus       320 p~~As~lla~~~i~l~~lIt  339 (509)
T PRK09424        320 PTQSSQLYGTNLVNLLKLLC  339 (509)
T ss_pred             HHHHHHHHHhCCccHHHHhc
Confidence            4 699999999886544443

>PF13602 ADH_zinc_N_2: Zinc-binding dehydrogenase; PDB: 3TQH_A 2VN8_A 3GOH_A 4A27_A

Probab=99.27  E-value=3.3e-12  Score=99.68  Aligned_cols=119  Identities=25%  Similarity=0.361  Sum_probs=78.4

Q ss_pred             cCCCEEEeCCCCcccHHHHHHHHHHHhCCCceEEEeCCC--CHHHHHHHHHhcccCCEEEEEccCCCCccccchHhhhcC
Q 017868          226 IGADNIVKVSTNLQDIAEEVEKIQKAMGTGIDVSFDCAG--LNKTMSTALGATCAGGKVCLVGMGHHEMTVPLTPAAVRE  303 (365)
Q Consensus       226 ~g~~~~~~~~~~~~~~~~~i~~~~~~~~~~~d~vid~~g--~~~~~~~~~~~l~~~G~~~~~g~~~~~~~~~~~~~~~~~  303 (365)
                      ||++++++|..  +++         ..++++|+|||++|  ....+..++++| ++|+++.++.   .............
T Consensus         1 LGAd~vidy~~--~~~---------~~~~~~D~ViD~~g~~~~~~~~~~~~~l-~~G~~v~i~~---~~~~~~~~~~~~~   65 (127)
T PF13602_consen    1 LGADEVIDYRD--TDF---------AGPGGVDVVIDTVGQTGESLLDASRKLL-PGGRVVSIGG---DLPSFARRLKGRS   65 (127)
T ss_dssp             CT-SEEEETTC--SHH---------HTTS-EEEEEESS-CCHHHCGGGCCCTE-EEEEEEEE-S---HHHHHHHHHHCHH
T ss_pred             CCcCEEecCCC--ccc---------cCCCCceEEEECCCCccHHHHHHHHHHC-CCCEEEEECC---cccchhhhhcccc
Confidence            68999998863  444         22689999999999  654446777888 9999988863   1000000011223


Q ss_pred             cEEEeecc------cCCcHHHHHHHHHcCCCCCCCceEEEecCChhhHHHHHHHHhcCCCceEEEE
Q 017868          304 VDVVGVFR------YKNTWPLCLELLRSGKIDVKPLVTHRFGFSQKEVEEAFETSARGGTAIKVMF  363 (365)
Q Consensus       304 ~~i~~~~~------~~~~~~~~~~~l~~g~~~~~~~~~~~~~~~~~~~~~a~~~~~~~~~~gk~vi  363 (365)
                      .+......      ..+.++++.+++++|++  ++.+.++|+|  +++.+|++.+++++..||+||
T Consensus        66 ~~~~~~~~~~~~~~~~~~l~~l~~l~~~G~l--~~~i~~~f~l--~~~~~A~~~l~~~~~~GKvVl  127 (127)
T PF13602_consen   66 IRYSFLFSVDPNAIRAEALEELAELVAEGKL--KPPIDRVFPL--EEAPEAHERLESGHARGKVVL  127 (127)
T ss_dssp             CEEECCC-H--HHHHHHHHHHHHHHHHTTSS-----EEEEEEG--GGHHHHHHHHHCT--SSEEEE
T ss_pred             eEEEEEEecCCCchHHHHHHHHHHHHHCCCe--EEeeccEECH--HHHHHHHHHHHhCCCCCeEeC
Confidence            33333331      13458999999999999  7888899999  999999999999999999997

>PRK11873 arsM arsenite S-adenosylmethyltransferase; Reviewed

Probab=98.45  E-value=2.5e-06  Score=75.66  Aligned_cols=172  Identities=18%  Similarity=0.247  Sum_probs=103.0

Q ss_pred             hcCCCCCCEEEEEcCCHHHHHHHHHHHHHCCCC-eEEEEeCChhHHHHHHHc----CCCEEEeCCCCcccHHHHHHHHHH
Q 017868          176 RANIGPETNVLIMGAGPIGLVTMLGAPRAFGAP-RIVIVDVDDYRLSVAKEI----GADNIVKVSTNLQDIAEEVEKIQK  250 (365)
Q Consensus       176 ~~~~~~g~~vlI~G~g~~G~~ai~~l~~~~g~~-~vi~v~~~~~~~~~~~~~----g~~~~~~~~~~~~~~~~~i~~~~~  250 (365)
                      .+.+++|++||..|+|. |..+++ +++..|.. .+++++.+++..+.+++.    +...+....   .+    +.++. 
T Consensus        72 ~~~~~~g~~VLDiG~G~-G~~~~~-~a~~~g~~~~v~gvD~s~~~l~~A~~~~~~~g~~~v~~~~---~d----~~~l~-  141 (272)
T PRK11873         72 LAELKPGETVLDLGSGG-GFDCFL-AARRVGPTGKVIGVDMTPEMLAKARANARKAGYTNVEFRL---GE----IEALP-  141 (272)
T ss_pred             hccCCCCCEEEEeCCCC-CHHHHH-HHHHhCCCCEEEEECCCHHHHHHHHHHHHHcCCCCEEEEE---cc----hhhCC-
Confidence            46788999999999877 877777 66666653 699999999888877653    433221111   11    11111 


Q ss_pred             HhCCCceEEEeCC------CCHHHHHHHHHhcccCCEEEEEccCCCCccccchHhhhcCcEEE-eecccCCcHHHHHHHH
Q 017868          251 AMGTGIDVSFDCA------GLNKTMSTALGATCAGGKVCLVGMGHHEMTVPLTPAAVREVDVV-GVFRYKNTWPLCLELL  323 (365)
Q Consensus       251 ~~~~~~d~vid~~------g~~~~~~~~~~~l~~~G~~~~~g~~~~~~~~~~~~~~~~~~~i~-~~~~~~~~~~~~~~~l  323 (365)
                      ...+.+|+|+...      .....+..+.++|+++|++++.+..... .  ......+...+. +.........+..+++
T Consensus       142 ~~~~~fD~Vi~~~v~~~~~d~~~~l~~~~r~LkpGG~l~i~~~~~~~-~--~~~~~~~~~~~~~~~~~~~~~~~e~~~~l  218 (272)
T PRK11873        142 VADNSVDVIISNCVINLSPDKERVFKEAFRVLKPGGRFAISDVVLRG-E--LPEEIRNDAELYAGCVAGALQEEEYLAML  218 (272)
T ss_pred             CCCCceeEEEEcCcccCCCCHHHHHHHHHHHcCCCcEEEEEEeeccC-C--CCHHHHHhHHHHhccccCCCCHHHHHHHH
Confidence            1145799998643      2345788999999999999987643222 1  111111222222 1112234566777888


Q ss_pred             HcCCCC-CCCceEEEecCChhhHHHHHHHH--hcCCCceEEE
Q 017868          324 RSGKID-VKPLVTHRFGFSQKEVEEAFETS--ARGGTAIKVM  362 (365)
Q Consensus       324 ~~g~~~-~~~~~~~~~~~~~~~~~~a~~~~--~~~~~~gk~v  362 (365)
                      ++..+. ......+.+++  ++..++++.+  ..+...++.+
T Consensus       219 ~~aGf~~v~i~~~~~~~l--~~~~~~~~~~~~~~~~~~~~~~  258 (272)
T PRK11873        219 AEAGFVDITIQPKREYRI--PDAREFLEDWGIAPGRQLDGYI  258 (272)
T ss_pred             HHCCCCceEEEeccceec--ccHHHHHHHhccccccccCceE
Confidence            775442 23333445566  8888888887  5544444444

>TIGR00561 pntA NAD(P) transhydrogenase, alpha subunit

Probab=98.42  E-value=6e-06  Score=78.18  Aligned_cols=105  Identities=19%  Similarity=0.263  Sum_probs=78.2

Q ss_pred             CCCCEEEEEcCCHHHHHHHHHHHHHCCCCeEEEEeCChhHHHHHHHcCCCEEEeCCCC-------------cccHHHHHH
Q 017868          180 GPETNVLIMGAGPIGLVTMLGAPRAFGAPRIVIVDVDDYRLSVAKEIGADNIVKVSTN-------------LQDIAEEVE  246 (365)
Q Consensus       180 ~~g~~vlI~G~g~~G~~ai~~l~~~~g~~~vi~v~~~~~~~~~~~~~g~~~~~~~~~~-------------~~~~~~~i~  246 (365)
                      .++++++|.|+|.+|+++++ +++.+|+ .|++++.++++.+.++++|+..+.. +..             ++++.+...
T Consensus       162 vp~akVlViGaG~iGl~Aa~-~ak~lGA-~V~v~d~~~~rle~a~~lGa~~v~v-~~~e~g~~~~gYa~~~s~~~~~~~~  238 (511)
T TIGR00561       162 VPPAKVLVIGAGVAGLAAIG-AANSLGA-IVRAFDTRPEVKEQVQSMGAEFLEL-DFKEEGGSGDGYAKVMSEEFIAAEM  238 (511)
T ss_pred             CCCCEEEEECCCHHHHHHHH-HHHHCCC-EEEEEeCCHHHHHHHHHcCCeEEec-cccccccccccceeecCHHHHHHHH
Confidence            46799999999999999999 9999999 4888899999999999999876322 111             123333333


Q ss_pred             HHHHHhCCCceEEEeCC---CCHH---HHHHHHHhcccCCEEEEEcc
Q 017868          247 KIQKAMGTGIDVSFDCA---GLNK---TMSTALGATCAGGKVCLVGM  287 (365)
Q Consensus       247 ~~~~~~~~~~d~vid~~---g~~~---~~~~~~~~l~~~G~~~~~g~  287 (365)
                      +.......++|++|+|+   |.+.   .....++.+++++.++.++.
T Consensus       239 ~~~~e~~~~~DIVI~TalipG~~aP~Lit~emv~~MKpGsvIVDlA~  285 (511)
T TIGR00561       239 ELFAAQAKEVDIIITTALIPGKPAPKLITEEMVDSMKAGSVIVDLAA  285 (511)
T ss_pred             HHHHHHhCCCCEEEECcccCCCCCCeeehHHHHhhCCCCCEEEEeee
Confidence            32222246899999999   6432   45577899999999998864

In some species, such as Rhodospirillum rubrum, the alpha chain is replaced by two shorter chains, both with some homology to the full-length alpha chain modeled here. These score below the trusted cutoff.

>PF11017 DUF2855: Protein of unknown function (DUF2855); InterPro: IPR021276 This family of proteins has no known function

Probab=98.33  E-value=5.4e-05  Score=66.97  Aligned_cols=257  Identities=12%  Similarity=0.074  Sum_probs=139.9

Q ss_pred             cccCccceEEEEEeCCCCCCCCCCCEEEEcCCcCCCCCccccCCCCCCCCCcccccc----CCCCcceeeEEeecCCceE
Q 017868           75 MVIGHECAGVIEKVGSEVKTLVPGDRVALEPGISCWRCDHCKGGRYNLCPEMKFFAT----PPVHGSLANQVVHPADLCF  150 (365)
Q Consensus        75 ~~~G~e~~G~V~~vG~~v~~~~~Gd~V~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~----~~~~g~~~~~~~v~~~~~~  150 (365)
                      .+|-..+ ++|++  +++.++.+|+||.++.+..     ..+.-.+..-++..+...    ..-...|-+|.++..+..+
T Consensus        32 ~vPvWGf-A~Vve--S~~~~i~vGerlyGy~P~a-----shl~l~p~~v~~~~f~d~s~hR~~l~~~YN~Y~r~~~d~~y  103 (314)
T PF11017_consen   32 IVPVWGF-ATVVE--SRHPGIAVGERLYGYFPMA-----SHLVLEPGKVSPGGFRDVSPHRAGLPPIYNQYLRVSADPAY  103 (314)
T ss_pred             ccccceE-EEEEe--eCCCCccCccEEEeecccc-----ceeEEeccccCCCccccChhhhCcCchhhhceeecCCCccc
Confidence            3454544 45554  8889999999999975422     112222222222223322    1223556777777655444


Q ss_pred             ECCCCCCcchhccchhhHHHHHHHHh---cCCCCCCEEEEEcC-CHHHHHHHHHHHHHCCCCeEEEEeCChhHHHHHHHc
Q 017868          151 KLPDNVSLEEGAMCEPLSVGLHACRR---ANIGPETNVLIMGA-GPIGLVTMLGAPRAFGAPRIVIVDVDDYRLSVAKEI  226 (365)
Q Consensus       151 ~iP~~~~~~~a~~~~~~~~a~~~~~~---~~~~~g~~vlI~G~-g~~G~~ai~~l~~~~g~~~vi~v~~~~~~~~~~~~~  226 (365)
                      .  +......+..-|.+.|+|..-+.   ...-..+.|+|..| +..+..++..|.+..+...+|+++ +..+..+.+.+
T Consensus       104 ~--~~~e~~~~LlrPLf~Tsfll~d~l~~~~~~ga~~vvl~SASSKTA~glA~~L~~~~~~~~~vglT-S~~N~~Fve~l  180 (314)
T PF11017_consen  104 D--PEREDWQMLLRPLFITSFLLDDFLFDNDFFGAAQVVLSSASSKTAIGLAYCLKKQRGPPKVVGLT-SARNVAFVESL  180 (314)
T ss_pred             C--cchhHHHHHHHHHHHHHHHHHHHhcccccCCccEEEEeccchHHHHHHHHHhhccCCCceEEEEe-cCcchhhhhcc
Confidence            2  11111122223566677755322   22233456777776 778888888454355666889985 56667799999


Q ss_pred             CC-CEEEeCCCCcccHHHHHHHHHHHhCCCceEEEeCCCCHHHHHHHHHhcccCC-EEEEEccCCCCcc-----------
Q 017868          227 GA-DNIVKVSTNLQDIAEEVEKIQKAMGTGIDVSFDCAGLNKTMSTALGATCAGG-KVCLVGMGHHEMT-----------  293 (365)
Q Consensus       227 g~-~~~~~~~~~~~~~~~~i~~~~~~~~~~~d~vid~~g~~~~~~~~~~~l~~~G-~~~~~g~~~~~~~-----------  293 (365)
                      |. +.++.|++        |..+   ....--+++|..|+......+..++...= ..+.+|.+..+..           
T Consensus       181 g~Yd~V~~Yd~--------i~~l---~~~~~~v~VDfaG~~~~~~~Lh~~l~d~l~~~~~VG~th~~~~~~~~~l~g~~~  249 (314)
T PF11017_consen  181 GCYDEVLTYDD--------IDSL---DAPQPVVIVDFAGNGEVLAALHEHLGDNLVYSCLVGATHWDKVEAPADLPGPRP  249 (314)
T ss_pred             CCceEEeehhh--------hhhc---cCCCCEEEEECCCCHHHHHHHHHHHhhhhhEEEEEEccCccccCccccCCCCCc
Confidence            96 66666643        3332   13567899999999888888888887653 3555664432211           


Q ss_pred             --ccchHhhhcCcEEEeecccCCcHHHHHHHHHcCCCCCCCceEEEecCChhhHHHHHHHHhcCC
Q 017868          294 --VPLTPAAVREVDVVGVFRYKNTWPLCLELLRSGKIDVKPLVTHRFGFSQKEVEEAFETSARGG  356 (365)
Q Consensus       294 --~~~~~~~~~~~~i~~~~~~~~~~~~~~~~l~~g~~~~~~~~~~~~~~~~~~~~~a~~~~~~~~  356 (365)
                        ++......+++...|.-.+.+.+.+++.-....... ...+.+.-..  +.+.++++.+.+++
T Consensus       250 ~~FFAp~~~~kr~~~~G~~~~~~r~~~aw~~f~~~~~~-wl~~~~~~G~--ea~~~~y~~l~~G~  311 (314)
T PF11017_consen  250 EFFFAPDQIDKRIKEWGAAEFFQRMAAAWKRFAADAQP-WLKVEEVAGP--EAVEAAYQDLLAGK  311 (314)
T ss_pred             EEEeChHHHHHHHHHhCHHHHHHHHHHHHHHHHHhhcC-cEEEEEecCH--HHHHHHHHHHhcCC
Confidence              111112222222222222222223333222222221 2233455566  99999999998774

>cd05213 NAD_bind_Glutamyl_tRNA_reduct NADP-binding domain of glutamyl-tRNA reductase

Probab=98.22  E-value=3.8e-06  Score=75.78  Aligned_cols=108  Identities=24%  Similarity=0.310  Sum_probs=80.4

Q ss_pred             CceEECCCCCCcchhccchhhHHHHHHHHhcCC----CCCCEEEEEcCCHHHHHHHHHHHHHCCCCeEEEEeCChhHH-H
Q 017868          147 DLCFKLPDNVSLEEGAMCEPLSVGLHACRRANI----GPETNVLIMGAGPIGLVTMLGAPRAFGAPRIVIVDVDDYRL-S  221 (365)
Q Consensus       147 ~~~~~iP~~~~~~~a~~~~~~~~a~~~~~~~~~----~~g~~vlI~G~g~~G~~ai~~l~~~~g~~~vi~v~~~~~~~-~  221 (365)
                      +.++++|+.+..+.++...+.++++++++.+..    -++.+|+|.|+|.+|..+++ .++..|...+++++++.++. +
T Consensus       139 ~~a~~~~k~vr~et~i~~~~~sv~~~Av~~a~~~~~~l~~~~V~ViGaG~iG~~~a~-~L~~~g~~~V~v~~r~~~ra~~  217 (311)
T cd05213         139 QKAIKVGKRVRTETGISRGAVSISSAAVELAEKIFGNLKGKKVLVIGAGEMGELAAK-HLAAKGVAEITIANRTYERAEE  217 (311)
T ss_pred             HHHHHHHHHHhhhcCCCCCCcCHHHHHHHHHHHHhCCccCCEEEEECcHHHHHHHHH-HHHHcCCCEEEEEeCCHHHHHH
Confidence            457888999998888888888888888754332    47899999999999999999 65667877888898888764 6


Q ss_pred             HHHHcCCCEEEeCCCCcccHHHHHHHHHHHhCCCceEEEeCCCCHHH
Q 017868          222 VAKEIGADNIVKVSTNLQDIAEEVEKIQKAMGTGIDVSFDCAGLNKT  268 (365)
Q Consensus       222 ~~~~~g~~~~~~~~~~~~~~~~~i~~~~~~~~~~~d~vid~~g~~~~  268 (365)
                      +++++|+. .+.+    .+    +.+..    ..+|+||.|++.+..
T Consensus       218 la~~~g~~-~~~~----~~----~~~~l----~~aDvVi~at~~~~~  251 (311)
T cd05213         218 LAKELGGN-AVPL----DE----LLELL----NEADVVISATGAPHY  251 (311)
T ss_pred             HHHHcCCe-EEeH----HH----HHHHH----hcCCEEEECCCCCch
Confidence            78889873 2221    11    22221    358999999997644

Glutamyl-tRNA reductase catalyzes the conversion of glutamyl-tRNA to glutamate-1-semialdehyde, initiating the synthesis of tetrapyrrole. Whereas tRNAs are generally associated with peptide bond formation in protein translation, here the tRNA activates glutamate in the initiation of tetrapyrrole biosynthesis in archaea, plants and many bacteria. In the first step, activated glutamate is reduced to glutamate-1-semi-aldehyde via the NADPH dependent glutamyl-tRNA reductase. Glutamyl-tRNA reductase forms a V-shaped dimer. Each monomer has 3 domains: an N-terminal catalytic domain, a classic nucleotide binding domain, and a C-terminal dimerization domain. Although the representative structure 1GPJ lacks a bound NADPH, a theoretical binding pocket has been described. (PMID 11172694). Amino acid dehydrogenase (DH)-like NAD(P)-binding domains are members of the Rossmann fold superfamily and include glutamate,

>PRK00517 prmA ribosomal protein L11 methyltransferase; Reviewed

Probab=98.21  E-value=7.6e-05  Score=65.24  Aligned_cols=131  Identities=22%  Similarity=0.320  Sum_probs=83.7

Q ss_pred             ceeeEEeecCCceEECCCCCCcchhccchhhHHHHHHHHhcCCCCCCEEEEEcCCHHHHHHHHHHHHHCCCCeEEEEeCC
Q 017868          137 SLANQVVHPADLCFKLPDNVSLEEGAMCEPLSVGLHACRRANIGPETNVLIMGAGPIGLVTMLGAPRAFGAPRIVIVDVD  216 (365)
Q Consensus       137 ~~~~~~~v~~~~~~~iP~~~~~~~a~~~~~~~~a~~~~~~~~~~~g~~vlI~G~g~~G~~ai~~l~~~~g~~~vi~v~~~  216 (365)
                      +|.+|.. +...++.++++++|..+.-- ........+.. .+.++++||-.|+|. |..++. +++ .|+..+++++.+
T Consensus        78 ~~~~~~~-~~~~~i~i~p~~afgtg~h~-tt~~~l~~l~~-~~~~~~~VLDiGcGs-G~l~i~-~~~-~g~~~v~giDis  151 (250)
T PRK00517         78 SWEDPPD-PDEINIELDPGMAFGTGTHP-TTRLCLEALEK-LVLPGKTVLDVGCGS-GILAIA-AAK-LGAKKVLAVDID  151 (250)
T ss_pred             CCcCCCC-CCeEEEEECCCCccCCCCCH-HHHHHHHHHHh-hcCCCCEEEEeCCcH-HHHHHH-HHH-cCCCeEEEEECC
Confidence            4556544 66788999999888766422 21122223322 256889999999986 877766 554 577679999999


Q ss_pred             hhHHHHHHHc----CCCEEEeCCCCcccHHHHHHHHHHHhCCCceEEEeCCCCH---HHHHHHHHhcccCCEEEEEccC
Q 017868          217 DYRLSVAKEI----GADNIVKVSTNLQDIAEEVEKIQKAMGTGIDVSFDCAGLN---KTMSTALGATCAGGKVCLVGMG  288 (365)
Q Consensus       217 ~~~~~~~~~~----g~~~~~~~~~~~~~~~~~i~~~~~~~~~~~d~vid~~g~~---~~~~~~~~~l~~~G~~~~~g~~  288 (365)
                      +...+.+++.    +....+....               ....+|+|+......   ..+..+.++|+++|.+++.+..
T Consensus       152 ~~~l~~A~~n~~~~~~~~~~~~~~---------------~~~~fD~Vvani~~~~~~~l~~~~~~~LkpgG~lilsgi~  215 (250)
T PRK00517        152 PQAVEAARENAELNGVELNVYLPQ---------------GDLKADVIVANILANPLLELAPDLARLLKPGGRLILSGIL  215 (250)
T ss_pred             HHHHHHHHHHHHHcCCCceEEEcc---------------CCCCcCEEEEcCcHHHHHHHHHHHHHhcCCCcEEEEEECc
Confidence            9887766542    2211111000               011599998765432   3455788899999999987643

>PRK08306 dipicolinate synthase subunit A; Reviewed

Probab=98.12  E-value=0.00034  Score=62.60  Aligned_cols=114  Identities=17%  Similarity=0.178  Sum_probs=81.2

Q ss_pred             CCCEEEEEcCCHHHHHHHHHHHHHCCCCeEEEEeCChhHHHHHHHcCCCEEEeCCCCcccHHHHHHHHHHHhCCCceEEE
Q 017868          181 PETNVLIMGAGPIGLVTMLGAPRAFGAPRIVIVDVDDYRLSVAKEIGADNIVKVSTNLQDIAEEVEKIQKAMGTGIDVSF  260 (365)
Q Consensus       181 ~g~~vlI~G~g~~G~~ai~~l~~~~g~~~vi~v~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~i~~~~~~~~~~~d~vi  260 (365)
                      .+.+++|.|.|.+|..++. .++.+|+ .|.+++++.++.+.++++|+..+ .+    .    .+.+.    -..+|+||
T Consensus       151 ~g~kvlViG~G~iG~~~a~-~L~~~Ga-~V~v~~r~~~~~~~~~~~G~~~~-~~----~----~l~~~----l~~aDiVI  215 (296)
T PRK08306        151 HGSNVLVLGFGRTGMTLAR-TLKALGA-NVTVGARKSAHLARITEMGLSPF-HL----S----ELAEE----VGKIDIIF  215 (296)
T ss_pred             CCCEEEEECCcHHHHHHHH-HHHHCCC-EEEEEECCHHHHHHHHHcCCeee-cH----H----HHHHH----hCCCCEEE
Confidence            6899999999999999999 7788999 68888888888888888887532 11    1    12222    24799999


Q ss_pred             eCCCCHHHHHHHHHhcccCCEEEEEccCCCCccccchHhhhcCcEEEeecc
Q 017868          261 DCAGLNKTMSTALGATCAGGKVCLVGMGHHEMTVPLTPAAVREVDVVGVFR  311 (365)
Q Consensus       261 d~~g~~~~~~~~~~~l~~~G~~~~~g~~~~~~~~~~~~~~~~~~~i~~~~~  311 (365)
                      +++.........+..+++++.++.++.......+  .....++++..+...
T Consensus       216 ~t~p~~~i~~~~l~~~~~g~vIIDla~~pggtd~--~~a~~~Gv~~~~~~~  264 (296)
T PRK08306        216 NTIPALVLTKEVLSKMPPEALIIDLASKPGGTDF--EYAEKRGIKALLAPG  264 (296)
T ss_pred             ECCChhhhhHHHHHcCCCCcEEEEEccCCCCcCe--eehhhCCeEEEEECC
Confidence            9987543445677889999999888765544433  233445566665433

>PRK05476 S-adenosyl-L-homocysteine hydrolase; Provisional

Probab=98.10  E-value=6e-05  Score=70.11  Aligned_cols=103  Identities=21%  Similarity=0.275  Sum_probs=77.1

Q ss_pred             HHHHHHhc-CCC-CCCEEEEEcCCHHHHHHHHHHHHHCCCCeEEEEeCChhHHHHHHHcCCCEEEeCCCCcccHHHHHHH
Q 017868          170 GLHACRRA-NIG-PETNVLIMGAGPIGLVTMLGAPRAFGAPRIVIVDVDDYRLSVAKEIGADNIVKVSTNLQDIAEEVEK  247 (365)
Q Consensus       170 a~~~~~~~-~~~-~g~~vlI~G~g~~G~~ai~~l~~~~g~~~vi~v~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~i~~  247 (365)
                      +|.++.+. ++. .|++|+|.|.|.+|..+++ .++.+|+ +|++++.++.+...+...|+. +.       ++    .+
T Consensus       198 ~~~ai~rat~~~l~Gk~VlViG~G~IG~~vA~-~lr~~Ga-~ViV~d~dp~ra~~A~~~G~~-v~-------~l----~e  263 (425)
T PRK05476        198 LLDGIKRATNVLIAGKVVVVAGYGDVGKGCAQ-RLRGLGA-RVIVTEVDPICALQAAMDGFR-VM-------TM----EE  263 (425)
T ss_pred             hHHHHHHhccCCCCCCEEEEECCCHHHHHHHH-HHHhCCC-EEEEEcCCchhhHHHHhcCCE-ec-------CH----HH
Confidence            45555443 444 8999999999999999999 8899999 688888888877666666654 21       11    22


Q ss_pred             HHHHhCCCceEEEeCCCCHHHHH-HHHHhcccCCEEEEEccCCC
Q 017868          248 IQKAMGTGIDVSFDCAGLNKTMS-TALGATCAGGKVCLVGMGHH  290 (365)
Q Consensus       248 ~~~~~~~~~d~vid~~g~~~~~~-~~~~~l~~~G~~~~~g~~~~  290 (365)
                      ..    .++|+||+++|....+. ..+..+++++.++..|....
T Consensus       264 al----~~aDVVI~aTG~~~vI~~~~~~~mK~GailiNvG~~d~  303 (425)
T PRK05476        264 AA----ELGDIFVTATGNKDVITAEHMEAMKDGAILANIGHFDN  303 (425)
T ss_pred             HH----hCCCEEEECCCCHHHHHHHHHhcCCCCCEEEEcCCCCC
Confidence            21    37899999999876666 57888999999998886543

>TIGR01035 hemA glutamyl-tRNA reductase

Probab=98.09  E-value=2.1e-07  Score=87.22  Aligned_cols=159  Identities=19%  Similarity=0.229  Sum_probs=101.9

Q ss_pred             ccCccceEEEEEeCCCCCCCCCCCEEEEcCCcCCCCCccccCCCCCCCCCccccccCCCCcceeeEEeecCCceEECCCC
Q 017868           76 VIGHECAGVIEKVGSEVKTLVPGDRVALEPGISCWRCDHCKGGRYNLCPEMKFFATPPVHGSLANQVVHPADLCFKLPDN  155 (365)
Q Consensus        76 ~~G~e~~G~V~~vG~~v~~~~~Gd~V~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~v~~~~~~~iP~~  155 (365)
                      .-|.|+++.+.+|++++.+     +|++-+.. |++|.+|.    ..|.+....|. ..++.|++++.++. .+.. -.+
T Consensus        89 ~~~~~a~~hl~~Va~GldS-----~V~GE~qI-~gQvk~a~----~~a~~~~~~g~-~l~~lf~~a~~~~k-~vr~-~t~  155 (417)
T TIGR01035        89 LTGESAVEHLFRVASGLDS-----MVVGETQI-LGQVKNAY----KVAQEEKTVGK-VLERLFQKAFSVGK-RVRT-ETD  155 (417)
T ss_pred             cCchHHHHHHHHHHhhhhh-----hhcCChHH-HHHHHHHH----HHHHHcCCchH-HHHHHHHHHHHHhh-hhhh-hcC
Confidence            4688999999999999876     55665555 88888883    33433333332 24578899888775 2221 001


Q ss_pred             CCcchhccchhhHHHHHHH----HhcCCCCCCEEEEEcCCHHHHHHHHHHHHHCCCCeEEEEeCChhHHH-HHHHcCCCE
Q 017868          156 VSLEEGAMCEPLSVGLHAC----RRANIGPETNVLIMGAGPIGLVTMLGAPRAFGAPRIVIVDVDDYRLS-VAKEIGADN  230 (365)
Q Consensus       156 ~~~~~a~~~~~~~~a~~~~----~~~~~~~g~~vlI~G~g~~G~~ai~~l~~~~g~~~vi~v~~~~~~~~-~~~~~g~~~  230 (365)
                      ++      -.+.+.++.++    +.....++++|+|.|+|.+|..+++ .+...|+..+++++++.++.+ ++++++...
T Consensus       156 i~------~~~vSv~~~Av~la~~~~~~l~~~~VlViGaG~iG~~~a~-~L~~~G~~~V~v~~rs~~ra~~la~~~g~~~  228 (417)
T TIGR01035       156 IS------AGAVSISSAAVELAERIFGSLKGKKALLIGAGEMGELVAK-HLLRKGVGKILIANRTYERAEDLAKELGGEA  228 (417)
T ss_pred             CC------CCCcCHHHHHHHHHHHHhCCccCCEEEEECChHHHHHHHH-HHHHCCCCEEEEEeCCHHHHHHHHHHcCCeE
Confidence            11      01222223232    3334467899999999999999999 556689778888888887754 777887642


Q ss_pred             EEeCCCCcccHHHHHHHHHHHhCCCceEEEeCCCCHH
Q 017868          231 IVKVSTNLQDIAEEVEKIQKAMGTGIDVSFDCAGLNK  267 (365)
Q Consensus       231 ~~~~~~~~~~~~~~i~~~~~~~~~~~d~vid~~g~~~  267 (365)
                       +.+    .+    +.+.    -.++|+||+|++.+.
T Consensus       229 -i~~----~~----l~~~----l~~aDvVi~aT~s~~  252 (417)
T TIGR01035       229 -VKF----ED----LEEY----LAEADIVISSTGAPH  252 (417)
T ss_pred             -eeH----HH----HHHH----HhhCCEEEECCCCCC
Confidence             221    12    2222    146999999998653

This enzyme, together with glutamate-1-semialdehyde-2,1-aminomutase (TIGR00713), leads to the production of delta-amino-levulinic acid from Glu-tRNA.

>TIGR00936 ahcY adenosylhomocysteinase

Probab=97.83  E-value=0.00026  Score=65.48  Aligned_cols=93  Identities=20%  Similarity=0.264  Sum_probs=72.3

Q ss_pred             CCCCCEEEEEcCCHHHHHHHHHHHHHCCCCeEEEEeCChhHHHHHHHcCCCEEEeCCCCcccHHHHHHHHHHHhCCCceE
Q 017868          179 IGPETNVLIMGAGPIGLVTMLGAPRAFGAPRIVIVDVDDYRLSVAKEIGADNIVKVSTNLQDIAEEVEKIQKAMGTGIDV  258 (365)
Q Consensus       179 ~~~g~~vlI~G~g~~G~~ai~~l~~~~g~~~vi~v~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~i~~~~~~~~~~~d~  258 (365)
                      ...|++|+|.|.|.+|..+++ .++.+|+ +|++++.++.+...+...|+. +.       +..+.+        .+.|+
T Consensus       192 ~l~Gk~VvViG~G~IG~~vA~-~ak~~Ga-~ViV~d~dp~r~~~A~~~G~~-v~-------~leeal--------~~aDV  253 (406)
T TIGR00936       192 LIAGKTVVVAGYGWCGKGIAM-RARGMGA-RVIVTEVDPIRALEAAMDGFR-VM-------TMEEAA--------KIGDI  253 (406)
T ss_pred             CCCcCEEEEECCCHHHHHHHH-HHhhCcC-EEEEEeCChhhHHHHHhcCCE-eC-------CHHHHH--------hcCCE
Confidence            468999999999999999999 8899999 588888888777666666753 21       111111        35799


Q ss_pred             EEeCCCCHHHHHH-HHHhcccCCEEEEEccCC
Q 017868          259 SFDCAGLNKTMST-ALGATCAGGKVCLVGMGH  289 (365)
Q Consensus       259 vid~~g~~~~~~~-~~~~l~~~G~~~~~g~~~  289 (365)
                      +|+++|....+.. .+..+++++.++..|...
T Consensus       254 VItaTG~~~vI~~~~~~~mK~GailiN~G~~~  285 (406)
T TIGR00936       254 FITATGNKDVIRGEHFENMKDGAIVANIGHFD  285 (406)
T ss_pred             EEECCCCHHHHHHHHHhcCCCCcEEEEECCCC
Confidence            9999998877764 888999999999887643

This enzyme hydrolyzes adenosylhomocysteine as part of a cycle for the regeneration of the methyl donor S-adenosylmethionine. Species that lack this enzyme are likely to have adenosylhomocysteine nucleosidase (EC 3.2.2.9), an enzyme which also acts as 5'-methyladenosine nucleosidase (see TIGR01704).

>COG2518 Pcm Protein-L-isoaspartate carboxylmethyltransferase [Posttranslational modification, protein turnover, chaperones]

Probab=97.78  E-value=0.00028  Score=58.55  Aligned_cols=111  Identities=16%  Similarity=0.208  Sum_probs=78.5

Q ss_pred             ccchhhHHHHHHHHhcCCCCCCEEEEEcCCHHHHHHHHHHHHHCCCCeEEEEeCChh----HHHHHHHcCCCEEEeCCC-
Q 017868          162 AMCEPLSVGLHACRRANIGPETNVLIMGAGPIGLVTMLGAPRAFGAPRIVIVDVDDY----RLSVAKEIGADNIVKVST-  236 (365)
Q Consensus       162 ~~~~~~~~a~~~~~~~~~~~g~~vlI~G~g~~G~~ai~~l~~~~g~~~vi~v~~~~~----~~~~~~~~g~~~~~~~~~-  236 (365)
                      -++....+...+++...+++|++||-+|+|. |..++- +++..+  +|+++++.++    ....++.+|...+..... 
T Consensus        53 qtis~P~~vA~m~~~L~~~~g~~VLEIGtGs-GY~aAv-la~l~~--~V~siEr~~~L~~~A~~~L~~lg~~nV~v~~gD  128 (209)
T COG2518          53 QTISAPHMVARMLQLLELKPGDRVLEIGTGS-GYQAAV-LARLVG--RVVSIERIEELAEQARRNLETLGYENVTVRHGD  128 (209)
T ss_pred             ceecCcHHHHHHHHHhCCCCCCeEEEECCCc-hHHHHH-HHHHhC--eEEEEEEcHHHHHHHHHHHHHcCCCceEEEECC
Confidence            3444333444456778899999999999875 877777 887766  7999998876    344567788865543322 


Q ss_pred             CcccHHHHHHHHHHHhCCCceEEEeCCCCHHHHHHHHHhcccCCEEEEE
Q 017868          237 NLQDIAEEVEKIQKAMGTGIDVSFDCAGLNKTMSTALGATCAGGKVCLV  285 (365)
Q Consensus       237 ~~~~~~~~i~~~~~~~~~~~d~vid~~g~~~~~~~~~~~l~~~G~~~~~  285 (365)
                      ....|..         ..+||.|+-+.+.+..-...++.|+++|+++.-
T Consensus       129 G~~G~~~---------~aPyD~I~Vtaaa~~vP~~Ll~QL~~gGrlv~P  168 (209)
T COG2518         129 GSKGWPE---------EAPYDRIIVTAAAPEVPEALLDQLKPGGRLVIP  168 (209)
T ss_pred             cccCCCC---------CCCcCEEEEeeccCCCCHHHHHhcccCCEEEEE
Confidence            2222211         378999998877665667888999999999874

>PRK00045 hemA glutamyl-tRNA reductase; Reviewed

Probab=97.75  E-value=6.9e-05  Score=70.64  Aligned_cols=158  Identities=20%  Similarity=0.275  Sum_probs=96.7

Q ss_pred             ccCccceEEEEEeCCCCCCCCCCCEEEEcCCcCCCCCccccCCCCCCCCCccccccCCCCcceeeEEeecCCceEECCCC
Q 017868           76 VIGHECAGVIEKVGSEVKTLVPGDRVALEPGISCWRCDHCKGGRYNLCPEMKFFATPPVHGSLANQVVHPADLCFKLPDN  155 (365)
Q Consensus        76 ~~G~e~~G~V~~vG~~v~~~~~Gd~V~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~v~~~~~~~iP~~  155 (365)
                      .-|+|+++.+.+|+++..+.-+|+.=+      |++|..    ....|......+. ..++.|++.        +++|..
T Consensus        91 ~~g~ea~~hl~~V~~GldS~V~GE~qI------lgQvk~----a~~~a~~~g~~g~-~l~~lf~~a--------~~~~k~  151 (423)
T PRK00045         91 HEGEEAVRHLFRVASGLDSMVLGEPQI------LGQVKD----AYALAQEAGTVGT-ILNRLFQKA--------FSVAKR  151 (423)
T ss_pred             cCCHHHHHHHHHHHhhhhhhhcCChHH------HHHHHH----HHHHHHHcCCchH-HHHHHHHHH--------HHHHhh
Confidence            469999999999999988755555322      233321    0111111111111 122444443        344444


Q ss_pred             CCcchhccchhhHHHHHHHHhcC----CCCCCEEEEEcCCHHHHHHHHHHHHHCCCCeEEEEeCChhHHH-HHHHcCCCE
Q 017868          156 VSLEEGAMCEPLSVGLHACRRAN----IGPETNVLIMGAGPIGLVTMLGAPRAFGAPRIVIVDVDDYRLS-VAKEIGADN  230 (365)
Q Consensus       156 ~~~~~a~~~~~~~~a~~~~~~~~----~~~g~~vlI~G~g~~G~~ai~~l~~~~g~~~vi~v~~~~~~~~-~~~~~g~~~  230 (365)
                      +..+.+..-.+.++++++++.+.    -.++++|+|.|+|.+|.++++ .+...|+..+++++++.++.+ +++.+|.. 
T Consensus       152 v~~~t~i~~~~~Sv~~~Av~~a~~~~~~~~~~~vlViGaG~iG~~~a~-~L~~~G~~~V~v~~r~~~ra~~la~~~g~~-  229 (423)
T PRK00045        152 VRTETGIGAGAVSVASAAVELAKQIFGDLSGKKVLVIGAGEMGELVAK-HLAEKGVRKITVANRTLERAEELAEEFGGE-  229 (423)
T ss_pred             HhhhcCCCCCCcCHHHHHHHHHHHhhCCccCCEEEEECchHHHHHHHH-HHHHCCCCeEEEEeCCHHHHHHHHHHcCCc-
Confidence            44444433346777777774432    257899999999999999999 666789878888888888755 77888864 


Q ss_pred             EEeCCCCcccHHHHHHHHHHHhCCCceEEEeCCCCH
Q 017868          231 IVKVSTNLQDIAEEVEKIQKAMGTGIDVSFDCAGLN  266 (365)
Q Consensus       231 ~~~~~~~~~~~~~~i~~~~~~~~~~~d~vid~~g~~  266 (365)
                      ++.+    .+    +.+.    -.++|+||+|++.+
T Consensus       230 ~~~~----~~----~~~~----l~~aDvVI~aT~s~  253 (423)
T PRK00045        230 AIPL----DE----LPEA----LAEADIVISSTGAP  253 (423)
T ss_pred             EeeH----HH----HHHH----hccCCEEEECCCCC
Confidence            2221    11    1111    14689999999865

>PLN02494 adenosylhomocysteinase

Probab=97.64  E-value=0.00051  Score=64.26  Aligned_cols=91  Identities=19%  Similarity=0.252  Sum_probs=71.6

Q ss_pred             CCCCEEEEEcCCHHHHHHHHHHHHHCCCCeEEEEeCChhHHHHHHHcCCCEEEeCCCCcccHHHHHHHHHHHhCCCceEE
Q 017868          180 GPETNVLIMGAGPIGLVTMLGAPRAFGAPRIVIVDVDDYRLSVAKEIGADNIVKVSTNLQDIAEEVEKIQKAMGTGIDVS  259 (365)
Q Consensus       180 ~~g~~vlI~G~g~~G~~ai~~l~~~~g~~~vi~v~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~i~~~~~~~~~~~d~v  259 (365)
                      -.|++|+|.|.|.+|..+++ .++.+|+ +|++++.++.+...+...|+..+        +..+    ..    ...|++
T Consensus       252 LaGKtVvViGyG~IGr~vA~-~aka~Ga-~VIV~e~dp~r~~eA~~~G~~vv--------~leE----al----~~ADVV  313 (477)
T PLN02494        252 IAGKVAVICGYGDVGKGCAA-AMKAAGA-RVIVTEIDPICALQALMEGYQVL--------TLED----VV----SEADIF  313 (477)
T ss_pred             cCCCEEEEECCCHHHHHHHH-HHHHCCC-EEEEEeCCchhhHHHHhcCCeec--------cHHH----HH----hhCCEE
Confidence            67999999999999999999 8889999 68888888877666666676421        1111    21    357999


Q ss_pred             EeCCCCHHHH-HHHHHhcccCCEEEEEccC
Q 017868          260 FDCAGLNKTM-STALGATCAGGKVCLVGMG  288 (365)
Q Consensus       260 id~~g~~~~~-~~~~~~l~~~G~~~~~g~~  288 (365)
                      +.++|....+ ...+..+++++.++.+|..
T Consensus       314 I~tTGt~~vI~~e~L~~MK~GAiLiNvGr~  343 (477)
T PLN02494        314 VTTTGNKDIIMVDHMRKMKNNAIVCNIGHF  343 (477)
T ss_pred             EECCCCccchHHHHHhcCCCCCEEEEcCCC
Confidence            9999977543 6899999999999999864

>PRK12771 putative glutamate synthase (NADPH) small subunit; Provisional

Probab=97.50  E-value=8.9e-05  Score=72.79  Aligned_cols=80  Identities=23%  Similarity=0.405  Sum_probs=55.2

Q ss_pred             CCCCCCEEEEEcCCHHHHHHHHHHHHHCCCCeEEEEeCC---------------------hhHHHHHHHcCCCEEEeCCC
Q 017868          178 NIGPETNVLIMGAGPIGLVTMLGAPRAFGAPRIVIVDVD---------------------DYRLSVAKEIGADNIVKVST  236 (365)
Q Consensus       178 ~~~~g~~vlI~G~g~~G~~ai~~l~~~~g~~~vi~v~~~---------------------~~~~~~~~~~g~~~~~~~~~  236 (365)
                      ..++|++|+|.|+|+.|+++++ .++..|++ |++++..                     +.+.+.++++|++..++...
T Consensus       133 ~~~~g~~V~VIGaGpaGL~aA~-~l~~~G~~-V~v~e~~~~~GG~l~~gip~~~~~~~~~~~~l~~~~~~Gv~~~~~~~~  210 (564)
T PRK12771        133 APDTGKRVAVIGGGPAGLSAAY-HLRRMGHA-VTIFEAGPKLGGMMRYGIPAYRLPREVLDAEIQRILDLGVEVRLGVRV  210 (564)
T ss_pred             CCCCCCEEEEECCCHHHHHHHH-HHHHCCCe-EEEEecCCCCCCeeeecCCCccCCHHHHHHHHHHHHHCCCEEEeCCEE
Confidence            3678999999999999999999 77788995 6667642                     34567788899875544211


Q ss_pred             CcccHHHHHHHHHHHhCCCceEEEeCCCCH
Q 017868          237 NLQDIAEEVEKIQKAMGTGIDVSFDCAGLN  266 (365)
Q Consensus       237 ~~~~~~~~i~~~~~~~~~~~d~vid~~g~~  266 (365)
                       ..+..  ....    ..++|+||+++|..
T Consensus       211 -~~~~~--~~~~----~~~~D~Vi~AtG~~  233 (564)
T PRK12771        211 -GEDIT--LEQL----EGEFDAVFVAIGAQ  233 (564)
T ss_pred             -CCcCC--HHHH----HhhCCEEEEeeCCC
Confidence             01210  1111    23699999999965

>PRK08324 short chain dehydrogenase; Validated

Probab=97.43  E-value=0.0022  Score=64.52  Aligned_cols=117  Identities=23%  Similarity=0.264  Sum_probs=69.4

Q ss_pred             cceeeEEeecCCceEECCCCCCcchhccchhhHHHHHHHHhcCCCCCCEEEEEcC-CHHHHHHHHHHHHHCCCCeEEEEe
Q 017868          136 GSLANQVVHPADLCFKLPDNVSLEEGAMCEPLSVGLHACRRANIGPETNVLIMGA-GPIGLVTMLGAPRAFGAPRIVIVD  214 (365)
Q Consensus       136 g~~~~~~~v~~~~~~~iP~~~~~~~a~~~~~~~~a~~~~~~~~~~~g~~vlI~G~-g~~G~~ai~~l~~~~g~~~vi~v~  214 (365)
                      -++.+|..+++..++.+ +..+.+++.....        -..+..+|+++||+|+ |++|.++++ .+...|+ .|+.++
T Consensus       385 ~~~~~~~~l~~~~~f~i-~~~~~e~a~l~~~--------~~~~~l~gk~vLVTGasggIG~~la~-~L~~~Ga-~Vvl~~  453 (681)
T PRK08324        385 EAVGRYEPLSEQEAFDI-EYWSLEQAKLQRM--------PKPKPLAGKVALVTGAAGGIGKATAK-RLAAEGA-CVVLAD  453 (681)
T ss_pred             hhcCCccCCChhhhcce-eeehhhhhhhhcC--------CCCcCCCCCEEEEecCCCHHHHHHHH-HHHHCcC-EEEEEe
Confidence            44567777777766666 5555555532100        0122346789999986 999999999 5456698 688888


Q ss_pred             CChhHHHHH-HHcCC---CEEEeCCC-CcccHHHHHHHHHHHhCCCceEEEeCCC
Q 017868          215 VDDYRLSVA-KEIGA---DNIVKVST-NLQDIAEEVEKIQKAMGTGIDVSFDCAG  264 (365)
Q Consensus       215 ~~~~~~~~~-~~~g~---~~~~~~~~-~~~~~~~~i~~~~~~~~~~~d~vid~~g  264 (365)
                      ++.++.+.+ +.++.   ...+..+- +..+....+.+..+. .+++|++|+++|
T Consensus       454 r~~~~~~~~~~~l~~~~~v~~v~~Dvtd~~~v~~~~~~~~~~-~g~iDvvI~~AG  507 (681)
T PRK08324        454 LDEEAAEAAAAELGGPDRALGVACDVTDEAAVQAAFEEAALA-FGGVDIVVSNAG  507 (681)
T ss_pred             CCHHHHHHHHHHHhccCcEEEEEecCCCHHHHHHHHHHHHHH-cCCCCEEEECCC
Confidence            887765543 44443   11222222 222333333333322 358999999998

>PRK00377 cbiT cobalt-precorrin-6Y C(15)-methyltransferase; Provisional

Probab=97.42  E-value=0.0032  Score=52.88  Aligned_cols=103  Identities=21%  Similarity=0.348  Sum_probs=68.9

Q ss_pred             HHhcCCCCCCEEEEEcCCHHHHHHHHHHHHHCC-CCeEEEEeCChhHHHHH----HHcC-CCEEEeCCCCcccHHHHHHH
Q 017868          174 CRRANIGPETNVLIMGAGPIGLVTMLGAPRAFG-APRIVIVDVDDYRLSVA----KEIG-ADNIVKVSTNLQDIAEEVEK  247 (365)
Q Consensus       174 ~~~~~~~~g~~vlI~G~g~~G~~ai~~l~~~~g-~~~vi~v~~~~~~~~~~----~~~g-~~~~~~~~~~~~~~~~~i~~  247 (365)
                      +....+.++++||..|+|. |.+++. +++..+ ..++++++.+++..+.+    +.++ ...+.....   +..+.+..
T Consensus        33 l~~l~~~~~~~vlDlG~Gt-G~~s~~-~a~~~~~~~~v~avD~~~~~~~~a~~n~~~~g~~~~v~~~~~---d~~~~l~~  107 (198)
T PRK00377         33 LSKLRLRKGDMILDIGCGT-GSVTVE-ASLLVGETGKVYAVDKDEKAINLTRRNAEKFGVLNNIVLIKG---EAPEILFT  107 (198)
T ss_pred             HHHcCCCCcCEEEEeCCcC-CHHHHH-HHHHhCCCCEEEEEECCHHHHHHHHHHHHHhCCCCCeEEEEe---chhhhHhh
Confidence            4567889999999999877 888888 666654 34799999998877654    4466 333322222   22222221


Q ss_pred             HHHHhCCCceEEEeCCCC---HHHHHHHHHhcccCCEEEEE
Q 017868          248 IQKAMGTGIDVSFDCAGL---NKTMSTALGATCAGGKVCLV  285 (365)
Q Consensus       248 ~~~~~~~~~d~vid~~g~---~~~~~~~~~~l~~~G~~~~~  285 (365)
                          ....+|.||...+.   ...+..+.+.|+++|+++..
T Consensus       108 ----~~~~~D~V~~~~~~~~~~~~l~~~~~~LkpgG~lv~~  144 (198)
T PRK00377        108 ----INEKFDRIFIGGGSEKLKEIISASWEIIKKGGRIVID  144 (198)
T ss_pred             ----cCCCCCEEEECCCcccHHHHHHHHHHHcCCCcEEEEE
Confidence                13579999985542   34666788899999998864

>TIGR00518 alaDH alanine dehydrogenase

Probab=97.41  E-value=0.0017  Score=60.06  Aligned_cols=96  Identities=21%  Similarity=0.288  Sum_probs=65.3

Q ss_pred             CCCEEEEEcCCHHHHHHHHHHHHHCCCCeEEEEeCChhHHHHHH-HcCCCEEEeCCCCcccHHHHHHHHHHHhCCCceEE
Q 017868          181 PETNVLIMGAGPIGLVTMLGAPRAFGAPRIVIVDVDDYRLSVAK-EIGADNIVKVSTNLQDIAEEVEKIQKAMGTGIDVS  259 (365)
Q Consensus       181 ~g~~vlI~G~g~~G~~ai~~l~~~~g~~~vi~v~~~~~~~~~~~-~~g~~~~~~~~~~~~~~~~~i~~~~~~~~~~~d~v  259 (365)
                      ++.+|+|.|+|.+|+.+++ .++.+|+ .|+++++++++.+.+. .++......+.    +. +.+.+..    ..+|++
T Consensus       166 ~~~~VlViGaG~vG~~aa~-~a~~lGa-~V~v~d~~~~~~~~l~~~~g~~v~~~~~----~~-~~l~~~l----~~aDvV  234 (370)
T TIGR00518       166 EPGDVTIIGGGVVGTNAAK-MANGLGA-TVTILDINIDRLRQLDAEFGGRIHTRYS----NA-YEIEDAV----KRADLL  234 (370)
T ss_pred             CCceEEEEcCCHHHHHHHH-HHHHCCC-eEEEEECCHHHHHHHHHhcCceeEeccC----CH-HHHHHHH----ccCCEE
Confidence            3456999999999999999 8889999 5888888888877654 45543222211    11 1222221    478999


Q ss_pred             EeCCC---C--HH-HHHHHHHhcccCCEEEEEcc
Q 017868          260 FDCAG---L--NK-TMSTALGATCAGGKVCLVGM  287 (365)
Q Consensus       260 id~~g---~--~~-~~~~~~~~l~~~G~~~~~g~  287 (365)
                      |++++   .  +. .....+..+++++.++.++.
T Consensus       235 I~a~~~~g~~~p~lit~~~l~~mk~g~vIvDva~  268 (370)
T TIGR00518       235 IGAVLIPGAKAPKLVSNSLVAQMKPGAVIVDVAI  268 (370)
T ss_pred             EEccccCCCCCCcCcCHHHHhcCCCCCEEEEEec
Confidence            99973   2  11 12567778899999998874

The family of known L-alanine dehydrogenases includes representatives from the Proteobacteria, Firmicutes, and Cyanobacteria, all with about 50 % identity or better. An outlier to this group in both sequence and gap pattern is the homolog from Helicobacter pylori, an epsilon division Proteobacteria, which must be considered a putative alanine dehydrogenase. Related proteins include saccharopine dehydrogenase and the N-terminal half of the NAD(P) transhydrogenase alpha subunit. All of these related proteins bind NAD and/or NADP.

>COG0300 DltE Short-chain dehydrogenases of various substrate specificities [General function prediction only]

Probab=97.38  E-value=0.0016  Score=56.54  Aligned_cols=83  Identities=24%  Similarity=0.274  Sum_probs=55.2

Q ss_pred             CCCCEEEEEcC-CHHHHHHHHHHHHHCCCCeEEEEeCChhHHHHH-HHcCC-----CEEEeCCCCcccHHHHHHHHHHHh
Q 017868          180 GPETNVLIMGA-GPIGLVTMLGAPRAFGAPRIVIVDVDDYRLSVA-KEIGA-----DNIVKVSTNLQDIAEEVEKIQKAM  252 (365)
Q Consensus       180 ~~g~~vlI~G~-g~~G~~ai~~l~~~~g~~~vi~v~~~~~~~~~~-~~~g~-----~~~~~~~~~~~~~~~~i~~~~~~~  252 (365)
                      ..+.++||+|| +++|...+..++ ..|+ +++.+.++++|.+.+ +++.-     ..++..|-.+.+-...+.+.....
T Consensus         4 ~~~~~~lITGASsGIG~~~A~~lA-~~g~-~liLvaR~~~kL~~la~~l~~~~~v~v~vi~~DLs~~~~~~~l~~~l~~~   81 (265)
T COG0300           4 MKGKTALITGASSGIGAELAKQLA-RRGY-NLILVARREDKLEALAKELEDKTGVEVEVIPADLSDPEALERLEDELKER   81 (265)
T ss_pred             CCCcEEEEECCCchHHHHHHHHHH-HCCC-EEEEEeCcHHHHHHHHHHHHHhhCceEEEEECcCCChhHHHHHHHHHHhc
Confidence            46789999998 999999999565 5599 688888999887643 44432     124444433333333444333333


Q ss_pred             CCCceEEEeCCC
Q 017868          253 GTGIDVSFDCAG  264 (365)
Q Consensus       253 ~~~~d~vid~~g  264 (365)
                      +..+|+.++++|
T Consensus        82 ~~~IdvLVNNAG   93 (265)
T COG0300          82 GGPIDVLVNNAG   93 (265)
T ss_pred             CCcccEEEECCC
Confidence            468999999998

>TIGR02853 spore_dpaA dipicolinic acid synthetase, A subunit

Probab=97.32  E-value=0.0033  Score=55.93  Aligned_cols=110  Identities=16%  Similarity=0.189  Sum_probs=73.0

Q ss_pred             CCCEEEEEcCCHHHHHHHHHHHHHCCCCeEEEEeCChhHHHHHHHcCCCEEEeCCCCcccHHHHHHHHHHHhCCCceEEE
Q 017868          181 PETNVLIMGAGPIGLVTMLGAPRAFGAPRIVIVDVDDYRLSVAKEIGADNIVKVSTNLQDIAEEVEKIQKAMGTGIDVSF  260 (365)
Q Consensus       181 ~g~~vlI~G~g~~G~~ai~~l~~~~g~~~vi~v~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~i~~~~~~~~~~~d~vi  260 (365)
                      .|.+++|.|.|.+|.+++. .++.+|+ +|.+.++++++.+.+.+++...+ .       + +.+.+.    -..+|+|+
T Consensus       150 ~gk~v~IiG~G~iG~avA~-~L~~~G~-~V~v~~R~~~~~~~~~~~g~~~~-~-------~-~~l~~~----l~~aDiVi  214 (287)
T TIGR02853       150 HGSNVMVLGFGRTGMTIAR-TFSALGA-RVFVGARSSADLARITEMGLIPF-P-------L-NKLEEK----VAEIDIVI  214 (287)
T ss_pred             CCCEEEEEcChHHHHHHHH-HHHHCCC-EEEEEeCCHHHHHHHHHCCCeee-c-------H-HHHHHH----hccCCEEE
Confidence            5789999999999999999 7788898 67888888877766666665421 1       1 112222    24799999


Q ss_pred             eCCCCHHHHHHHHHhcccCCEEEEEccCCCCccccchHhhhcCcEEE
Q 017868          261 DCAGLNKTMSTALGATCAGGKVCLVGMGHHEMTVPLTPAAVREVDVV  307 (365)
Q Consensus       261 d~~g~~~~~~~~~~~l~~~G~~~~~g~~~~~~~~~~~~~~~~~~~i~  307 (365)
                      .++.....-...+..++++..++.++.......+  ...-.+++...
T Consensus       215 nt~P~~ii~~~~l~~~k~~aliIDlas~Pg~tdf--~~Ak~~G~~a~  259 (287)
T TIGR02853       215 NTIPALVLTADVLSKLPKHAVIIDLASKPGGTDF--EYAKKRGIKAL  259 (287)
T ss_pred             ECCChHHhCHHHHhcCCCCeEEEEeCcCCCCCCH--HHHHHCCCEEE
Confidence            9987542223566778887777777665444333  33334444444

This predicted Rossman fold-containing protein is the A subunit of dipicolinic acid synthetase as found in most, though not all, endospore-forming low-GC Gram-positive bacteria; it is absent in Clostridium. The B subunit is represented by TIGR02852. This protein is also known as SpoVFA.

>PF01488 Shikimate_DH: Shikimate / quinate 5-dehydrogenase; InterPro: IPR006151 This entry represents a domain found in shikimate and quinate dehydrogenases, as well as glutamyl-tRNA reductases

Probab=97.30  E-value=0.0011  Score=51.92  Aligned_cols=73  Identities=25%  Similarity=0.343  Sum_probs=52.1

Q ss_pred             CCCEEEEEcCCHHHHHHHHHHHHHCCCCeEEEEeCChhHHH-HHHHcCCC--EEEeCCCCcccHHHHHHHHHHHhCCCce
Q 017868          181 PETNVLIMGAGPIGLVTMLGAPRAFGAPRIVIVDVDDYRLS-VAKEIGAD--NIVKVSTNLQDIAEEVEKIQKAMGTGID  257 (365)
Q Consensus       181 ~g~~vlI~G~g~~G~~ai~~l~~~~g~~~vi~v~~~~~~~~-~~~~~g~~--~~~~~~~~~~~~~~~i~~~~~~~~~~~d  257 (365)
                      ++.++||.|+|++|.+++. .+...|++.+..+.++.+|.+ +++.++..  ..+.++    ++.    +.    -..+|
T Consensus        11 ~~~~vlviGaGg~ar~v~~-~L~~~g~~~i~i~nRt~~ra~~l~~~~~~~~~~~~~~~----~~~----~~----~~~~D   77 (135)
T PF01488_consen   11 KGKRVLVIGAGGAARAVAA-ALAALGAKEITIVNRTPERAEALAEEFGGVNIEAIPLE----DLE----EA----LQEAD   77 (135)
T ss_dssp             TTSEEEEESSSHHHHHHHH-HHHHTTSSEEEEEESSHHHHHHHHHHHTGCSEEEEEGG----GHC----HH----HHTES
T ss_pred             CCCEEEEECCHHHHHHHHH-HHHHcCCCEEEEEECCHHHHHHHHHHcCccccceeeHH----HHH----HH----HhhCC
Confidence            5789999999999999999 666779998999999988765 55667433  223322    221    11    14799


Q ss_pred             EEEeCCCCH
Q 017868          258 VSFDCAGLN  266 (365)
Q Consensus       258 ~vid~~g~~  266 (365)
                      +||.|++..
T Consensus        78 ivI~aT~~~   86 (135)
T PF01488_consen   78 IVINATPSG   86 (135)
T ss_dssp             EEEE-SSTT
T ss_pred             eEEEecCCC
Confidence            999998864

Shikimate 5-dehydrogenase (1.1.1.25 from EC) catalyses the conversion of shikimate to 5-dehydroshikimate [, ]. This reaction is part of the shikimate pathway which is involved in the biosynthesis of aromatic amino acids []. Quinate 5-dehydrogenase catalyses the conversion of quinate to 5-dehydroquinate. This reaction is part of the quinate pathway where quinic acid is exploited as a source of carbon in prokaryotes and microbial eukaryotes. Both the shikimate and quinate pathways share two common pathway metabolites, 3-dehydroquinate and dehydroshikimate. Glutamyl-tRNA reductase (1.2.1.70 from EC) catalyzes the first step of tetrapyrrole biosynthesis in plants, archaea and most bacteria. The dimeric enzyme has an unusual V-shaped architecture where each monomer consists of three domains linked by a long 'spinal' alpha-helix. The central catalytic domain specifically recognises the glutamate moiety of the substrate []. ; PDB: 2EV9_B 2CY0_B 1WXD_A 2D5C_A 1NVT_B 2EGG_A 3PWZ_A 3DOO_A 3DON_A 3FBT_C ....

>COG2242 CobL Precorrin-6B methylase 2 [Coenzyme metabolism]

Probab=97.29  E-value=0.0049  Score=50.15  Aligned_cols=104  Identities=20%  Similarity=0.291  Sum_probs=72.3

Q ss_pred             HhcCCCCCCEEEEEcCCHHHHHHHHHHHHHCCCCeEEEEeCChhHHH----HHHHcCCCEEEeCCCCcccHHHHHHHHHH
Q 017868          175 RRANIGPETNVLIMGAGPIGLVTMLGAPRAFGAPRIVIVDVDDYRLS----VAKEIGADNIVKVSTNLQDIAEEVEKIQK  250 (365)
Q Consensus       175 ~~~~~~~g~~vlI~G~g~~G~~ai~~l~~~~g~~~vi~v~~~~~~~~----~~~~~g~~~~~~~~~~~~~~~~~i~~~~~  250 (365)
                      ...++++|+.++=.|+|. |..+++ ++......+++++++++++.+    .+++||.+.+.....+.+++   +..   
T Consensus        28 s~L~~~~g~~l~DIGaGt-Gsi~iE-~a~~~p~~~v~AIe~~~~a~~~~~~N~~~fg~~n~~vv~g~Ap~~---L~~---   99 (187)
T COG2242          28 SKLRPRPGDRLWDIGAGT-GSITIE-WALAGPSGRVIAIERDEEALELIERNAARFGVDNLEVVEGDAPEA---LPD---   99 (187)
T ss_pred             HhhCCCCCCEEEEeCCCc-cHHHHH-HHHhCCCceEEEEecCHHHHHHHHHHHHHhCCCcEEEEeccchHh---hcC---
Confidence            456788999776678864 777788 665545558999999988765    46779988766655443332   221   


Q ss_pred             HhCCCceEEEeCCC--CHHHHHHHHHhcccCCEEEEEccC
Q 017868          251 AMGTGIDVSFDCAG--LNKTMSTALGATCAGGKVCLVGMG  288 (365)
Q Consensus       251 ~~~~~~d~vid~~g--~~~~~~~~~~~l~~~G~~~~~g~~  288 (365)
                        -..+|.+|---|  -+..++.++..|+++|+++.....
T Consensus       100 --~~~~daiFIGGg~~i~~ile~~~~~l~~ggrlV~nait  137 (187)
T COG2242         100 --LPSPDAIFIGGGGNIEEILEAAWERLKPGGRLVANAIT  137 (187)
T ss_pred             --CCCCCEEEECCCCCHHHHHHHHHHHcCcCCeEEEEeec
Confidence              126898885322  245777899999999999986543

>PTZ00075 Adenosylhomocysteinase; Provisional

Probab=97.20  E-value=0.0028  Score=59.62  Aligned_cols=92  Identities=21%  Similarity=0.279  Sum_probs=69.9

Q ss_pred             CCCCCEEEEEcCCHHHHHHHHHHHHHCCCCeEEEEeCChhHHHHHHHcCCCEEEeCCCCcccHHHHHHHHHHHhCCCceE
Q 017868          179 IGPETNVLIMGAGPIGLVTMLGAPRAFGAPRIVIVDVDDYRLSVAKEIGADNIVKVSTNLQDIAEEVEKIQKAMGTGIDV  258 (365)
Q Consensus       179 ~~~g~~vlI~G~g~~G~~ai~~l~~~~g~~~vi~v~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~i~~~~~~~~~~~d~  258 (365)
                      .-.|++|+|.|.|.+|..+++ .++.+|+ .|++++.++.+...+...|+...        ++    .+..    ...|+
T Consensus       251 ~LaGKtVgVIG~G~IGr~vA~-rL~a~Ga-~ViV~e~dp~~a~~A~~~G~~~~--------~l----eell----~~ADI  312 (476)
T PTZ00075        251 MIAGKTVVVCGYGDVGKGCAQ-ALRGFGA-RVVVTEIDPICALQAAMEGYQVV--------TL----EDVV----ETADI  312 (476)
T ss_pred             CcCCCEEEEECCCHHHHHHHH-HHHHCCC-EEEEEeCCchhHHHHHhcCceec--------cH----HHHH----hcCCE
Confidence            458999999999999999999 8889999 68888777766655555565321        12    1221    46899


Q ss_pred             EEeCCCCHHHHH-HHHHhcccCCEEEEEccC
Q 017868          259 SFDCAGLNKTMS-TALGATCAGGKVCLVGMG  288 (365)
Q Consensus       259 vid~~g~~~~~~-~~~~~l~~~G~~~~~g~~  288 (365)
                      |+.++|....+. ..+..+++++.++.+|..
T Consensus       313 VI~atGt~~iI~~e~~~~MKpGAiLINvGr~  343 (476)
T PTZ00075        313 FVTATGNKDIITLEHMRRMKNNAIVGNIGHF  343 (476)
T ss_pred             EEECCCcccccCHHHHhccCCCcEEEEcCCC
Confidence            999999766654 788999999999998754

>TIGR00406 prmA ribosomal protein L11 methyltransferase

Probab=97.17  E-value=0.022  Score=50.81  Aligned_cols=96  Identities=20%  Similarity=0.279  Sum_probs=62.4

Q ss_pred             CCCCCEEEEEcCCHHHHHHHHHHHHHCCCCeEEEEeCChhHHHHHHHc----CCCE-EEeCCCCcccHHHHHHHHHHHhC
Q 017868          179 IGPETNVLIMGAGPIGLVTMLGAPRAFGAPRIVIVDVDDYRLSVAKEI----GADN-IVKVSTNLQDIAEEVEKIQKAMG  253 (365)
Q Consensus       179 ~~~g~~vlI~G~g~~G~~ai~~l~~~~g~~~vi~v~~~~~~~~~~~~~----g~~~-~~~~~~~~~~~~~~i~~~~~~~~  253 (365)
                      ..++++||-.|+|. |..++. +++ .|+..+++++.++...+.+++.    +... +.....   +    ...   ...
T Consensus       157 ~~~g~~VLDvGcGs-G~lai~-aa~-~g~~~V~avDid~~al~~a~~n~~~n~~~~~~~~~~~---~----~~~---~~~  223 (288)
T TIGR00406       157 DLKDKNVIDVGCGS-GILSIA-ALK-LGAAKVVGIDIDPLAVESARKNAELNQVSDRLQVKLI---Y----LEQ---PIE  223 (288)
T ss_pred             cCCCCEEEEeCCCh-hHHHHH-HHH-cCCCeEEEEECCHHHHHHHHHHHHHcCCCcceEEEec---c----ccc---ccC
Confidence            45789999999877 777766 554 5777899999998876665442    3221 111111   1    001   114


Q ss_pred             CCceEEEeCCCCH---HHHHHHHHhcccCCEEEEEcc
Q 017868          254 TGIDVSFDCAGLN---KTMSTALGATCAGGKVCLVGM  287 (365)
Q Consensus       254 ~~~d~vid~~g~~---~~~~~~~~~l~~~G~~~~~g~  287 (365)
                      .++|+|+......   ..+..+.+.|+++|.+++.+.
T Consensus       224 ~~fDlVvan~~~~~l~~ll~~~~~~LkpgG~li~sgi  260 (288)
T TIGR00406       224 GKADVIVANILAEVIKELYPQFSRLVKPGGWLILSGI  260 (288)
T ss_pred             CCceEEEEecCHHHHHHHHHHHHHHcCCCcEEEEEeC
Confidence            6899999755432   345567889999999988764

Ribosomal protein L11 methyltransferase is an S-adenosyl-L-methionine-dependent methyltransferase required for the modification of ribosomal protein L11. This protein is found in bacteria and (with a probable transit peptide) in Arabidopsis.

>PRK13943 protein-L-isoaspartate O-methyltransferase; Provisional

Probab=97.14  E-value=0.0069  Score=54.69  Aligned_cols=102  Identities=23%  Similarity=0.301  Sum_probs=70.3

Q ss_pred             HHhcCCCCCCEEEEEcCCHHHHHHHHHHHHHCCC-CeEEEEeCChhHHHHH----HHcCCCEEEeCCCCcccHHHHHHHH
Q 017868          174 CRRANIGPETNVLIMGAGPIGLVTMLGAPRAFGA-PRIVIVDVDDYRLSVA----KEIGADNIVKVSTNLQDIAEEVEKI  248 (365)
Q Consensus       174 ~~~~~~~~g~~vlI~G~g~~G~~ai~~l~~~~g~-~~vi~v~~~~~~~~~~----~~~g~~~~~~~~~~~~~~~~~i~~~  248 (365)
                      ++...++++++||..|+| .|..++. +++..+. ..|++++.+++..+.+    ++.|.+.+.....   +..+.+.. 
T Consensus        73 l~~L~i~~g~~VLDIG~G-tG~~a~~-LA~~~~~~g~VvgVDis~~~l~~Ar~~l~~~g~~nV~~i~g---D~~~~~~~-  146 (322)
T PRK13943         73 MEWVGLDKGMRVLEIGGG-TGYNAAV-MSRVVGEKGLVVSVEYSRKICEIAKRNVRRLGIENVIFVCG---DGYYGVPE-  146 (322)
T ss_pred             HHhcCCCCCCEEEEEeCC-ccHHHHH-HHHhcCCCCEEEEEECCHHHHHHHHHHHHHcCCCcEEEEeC---Chhhcccc-
Confidence            455678899999999987 4888888 7777653 3689999998765544    4467654433222   22211111 


Q ss_pred             HHHhCCCceEEEeCCCCHHHHHHHHHhcccCCEEEEE
Q 017868          249 QKAMGTGIDVSFDCAGLNKTMSTALGATCAGGKVCLV  285 (365)
Q Consensus       249 ~~~~~~~~d~vid~~g~~~~~~~~~~~l~~~G~~~~~  285 (365)
                          ...+|+|+.+.+........++.|+++|+++..
T Consensus       147 ----~~~fD~Ii~~~g~~~ip~~~~~~LkpgG~Lvv~  179 (322)
T PRK13943        147 ----FAPYDVIFVTVGVDEVPETWFTQLKEGGRVIVP  179 (322)
T ss_pred             ----cCCccEEEECCchHHhHHHHHHhcCCCCEEEEE
Confidence                246999999888665666788999999998763

>PRK05993 short chain dehydrogenase; Provisional

Probab=97.10  E-value=0.0057  Score=54.32  Aligned_cols=81  Identities=17%  Similarity=0.257  Sum_probs=52.8

Q ss_pred             CCCEEEEEcC-CHHHHHHHHHHHHHCCCCeEEEEeCChhHHHHHHHcCCCEEEeCCC-CcccHHHHHHHHHHHhCCCceE
Q 017868          181 PETNVLIMGA-GPIGLVTMLGAPRAFGAPRIVIVDVDDYRLSVAKEIGADNIVKVST-NLQDIAEEVEKIQKAMGTGIDV  258 (365)
Q Consensus       181 ~g~~vlI~G~-g~~G~~ai~~l~~~~g~~~vi~v~~~~~~~~~~~~~g~~~~~~~~~-~~~~~~~~i~~~~~~~~~~~d~  258 (365)
                      .+.++||+|+ |++|.++++.+ ...|+ .|+++++++++.+.+...+...+ ..+- +..++...+....+..++.+|+
T Consensus         3 ~~k~vlItGasggiG~~la~~l-~~~G~-~Vi~~~r~~~~~~~l~~~~~~~~-~~Dl~d~~~~~~~~~~~~~~~~g~id~   79 (277)
T PRK05993          3 MKRSILITGCSSGIGAYCARAL-QSDGW-RVFATCRKEEDVAALEAEGLEAF-QLDYAEPESIAALVAQVLELSGGRLDA   79 (277)
T ss_pred             CCCEEEEeCCCcHHHHHHHHHH-HHCCC-EEEEEECCHHHHHHHHHCCceEE-EccCCCHHHHHHHHHHHHHHcCCCccE
Confidence            4578999987 99999999945 45698 57777888877776666554432 2222 2233333444433323467999


Q ss_pred             EEeCCC
Q 017868          259 SFDCAG  264 (365)
Q Consensus       259 vid~~g  264 (365)
                      +|.+.|
T Consensus        80 li~~Ag   85 (277)
T PRK05993         80 LFNNGA   85 (277)
T ss_pred             EEECCC
Confidence            999876

>COG2264 PrmA Ribosomal protein L11 methylase [Translation, ribosomal structure and biogenesis]

Probab=97.08  E-value=0.013  Score=51.77  Aligned_cols=136  Identities=18%  Similarity=0.187  Sum_probs=79.7

Q ss_pred             eeeEEeecCCceEECCCCCCcchhccchhhHHHHHHHH--hcCCCCCCEEEEEcCCHHHHHHHHHHHHHCCCCeEEEEeC
Q 017868          138 LANQVVHPADLCFKLPDNVSLEEGAMCEPLSVGLHACR--RANIGPETNVLIMGAGPIGLVTMLGAPRAFGAPRIVIVDV  215 (365)
Q Consensus       138 ~~~~~~v~~~~~~~iP~~~~~~~a~~~~~~~~a~~~~~--~~~~~~g~~vlI~G~g~~G~~ai~~l~~~~g~~~vi~v~~  215 (365)
                      |++|..-.....+++.+++.|-    .....|...+++  ...+++|.+||=.|+|+ |.+++. .+ .+|+..++++|.
T Consensus       121 w~~~~~~~~~~~i~lDPGlAFG----TG~HpTT~lcL~~Le~~~~~g~~vlDvGcGS-GILaIA-a~-kLGA~~v~g~Di  193 (300)
T COG2264         121 WREYPEPSDELNIELDPGLAFG----TGTHPTTSLCLEALEKLLKKGKTVLDVGCGS-GILAIA-AA-KLGAKKVVGVDI  193 (300)
T ss_pred             CccCCCCCCceEEEEccccccC----CCCChhHHHHHHHHHHhhcCCCEEEEecCCh-hHHHHH-HH-HcCCceEEEecC
Confidence            4443322235667777776552    334444444442  13356999998899854 666655 43 559999999999


Q ss_pred             ChhHHH----HHHHcCCCEEEeCCCCcccHHHHHHHHHHHhCCCceEEEeCCCCH---HHHHHHHHhcccCCEEEEEccC
Q 017868          216 DDYRLS----VAKEIGADNIVKVSTNLQDIAEEVEKIQKAMGTGIDVSFDCAGLN---KTMSTALGATCAGGKVCLVGMG  288 (365)
Q Consensus       216 ~~~~~~----~~~~~g~~~~~~~~~~~~~~~~~i~~~~~~~~~~~d~vid~~g~~---~~~~~~~~~l~~~G~~~~~g~~  288 (365)
                      ++...+    .++.-+......  ....+..+.+      .++++|+|+-.+=-.   .......+.++++|.+++.|..
T Consensus       194 Dp~AV~aa~eNa~~N~v~~~~~--~~~~~~~~~~------~~~~~DvIVANILA~vl~~La~~~~~~lkpgg~lIlSGIl  265 (300)
T COG2264         194 DPQAVEAARENARLNGVELLVQ--AKGFLLLEVP------ENGPFDVIVANILAEVLVELAPDIKRLLKPGGRLILSGIL  265 (300)
T ss_pred             CHHHHHHHHHHHHHcCCchhhh--cccccchhhc------ccCcccEEEehhhHHHHHHHHHHHHHHcCCCceEEEEeeh
Confidence            886544    444444442110  0001111111      146899999765321   3455778899999999988753

>COG4221 Short-chain alcohol dehydrogenase of unknown specificity [General function prediction only]

Probab=97.07  E-value=0.0065  Score=51.58  Aligned_cols=81  Identities=32%  Similarity=0.404  Sum_probs=55.6

Q ss_pred             CCCEEEEEcC-CHHHHHHHHHHHHHCCCCeEEEEeCChhHHH-HHHHcCC----CEEEeCCCCcccHHHHHHHHHHHhCC
Q 017868          181 PETNVLIMGA-GPIGLVTMLGAPRAFGAPRIVIVDVDDYRLS-VAKEIGA----DNIVKVSTNLQDIAEEVEKIQKAMGT  254 (365)
Q Consensus       181 ~g~~vlI~G~-g~~G~~ai~~l~~~~g~~~vi~v~~~~~~~~-~~~~~g~----~~~~~~~~~~~~~~~~i~~~~~~~~~  254 (365)
                      .++.++|+|| +++|.+.++ .....|+ +++.+.++.++++ ++.+++.    ....++ .+..+....+....+. -+
T Consensus         5 ~~kv~lITGASSGiG~A~A~-~l~~~G~-~vvl~aRR~drL~~la~~~~~~~~~~~~~DV-tD~~~~~~~i~~~~~~-~g   80 (246)
T COG4221           5 KGKVALITGASSGIGEATAR-ALAEAGA-KVVLAARREERLEALADEIGAGAALALALDV-TDRAAVEAAIEALPEE-FG   80 (246)
T ss_pred             CCcEEEEecCcchHHHHHHH-HHHHCCC-eEEEEeccHHHHHHHHHhhccCceEEEeecc-CCHHHHHHHHHHHHHh-hC
Confidence            4577899998 999999999 5556699 5777778888876 5577883    222332 2334545555554432 46


Q ss_pred             CceEEEeCCCC
Q 017868          255 GIDVSFDCAGL  265 (365)
Q Consensus       255 ~~d~vid~~g~  265 (365)
                      .+|+.++..|.
T Consensus        81 ~iDiLvNNAGl   91 (246)
T COG4221          81 RIDILVNNAGL   91 (246)
T ss_pred             cccEEEecCCC
Confidence            89999998883

>PRK05786 fabG 3-ketoacyl-(acyl-carrier-protein) reductase; Provisional

Probab=97.05  E-value=0.023  Score=48.97  Aligned_cols=105  Identities=20%  Similarity=0.204  Sum_probs=61.8

Q ss_pred             CCCEEEEEcC-CHHHHHHHHHHHHHCCCCeEEEEeCChhHHHHH-HHc---CCCEEEeCCCC-cccHHHHHHHHHHHhCC
Q 017868          181 PETNVLIMGA-GPIGLVTMLGAPRAFGAPRIVIVDVDDYRLSVA-KEI---GADNIVKVSTN-LQDIAEEVEKIQKAMGT  254 (365)
Q Consensus       181 ~g~~vlI~G~-g~~G~~ai~~l~~~~g~~~vi~v~~~~~~~~~~-~~~---g~~~~~~~~~~-~~~~~~~i~~~~~~~~~  254 (365)
                      .++++||+|+ |.+|..+++ .+...|+ .|+.+++++++.+.+ +++   +....+..+-. .++....+++.... -+
T Consensus         4 ~~~~vlItGa~g~iG~~~a~-~l~~~G~-~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~Dl~~~~~~~~~~~~~~~~-~~   80 (238)
T PRK05786          4 KGKKVAIIGVSEGLGYAVAY-FALKEGA-QVCINSRNENKLKRMKKTLSKYGNIHYVVGDVSSTESARNVIEKAAKV-LN   80 (238)
T ss_pred             CCcEEEEECCCchHHHHHHH-HHHHCCC-EEEEEeCCHHHHHHHHHHHHhcCCeEEEECCCCCHHHHHHHHHHHHHH-hC
Confidence            4679999987 999999999 5556799 577777777766544 332   22222322221 12222223222221 24


Q ss_pred             CceEEEeCCCCH-----------------------HHHHHHHHhcccCCEEEEEccC
Q 017868          255 GIDVSFDCAGLN-----------------------KTMSTALGATCAGGKVCLVGMG  288 (365)
Q Consensus       255 ~~d~vid~~g~~-----------------------~~~~~~~~~l~~~G~~~~~g~~  288 (365)
                      ++|.++.+.|..                       ...+.....+..+|+++.++..
T Consensus        81 ~id~ii~~ag~~~~~~~~~~~~~~~~~~~n~~~~~~~~~~~~~~~~~~~~iv~~ss~  137 (238)
T PRK05786         81 AIDGLVVTVGGYVEDTVEEFSGLEEMLTNHIKIPLYAVNASLRFLKEGSSIVLVSSM  137 (238)
T ss_pred             CCCEEEEcCCCcCCCchHHHHHHHHHHHHhchHHHHHHHHHHHHHhcCCEEEEEecc
Confidence            789999888731                       0123444556677888888643

>COG2230 Cfa Cyclopropane fatty acid synthase and related methyltransferases [Cell envelope biogenesis, outer membrane]

Probab=96.94  E-value=0.025  Score=49.55  Aligned_cols=103  Identities=20%  Similarity=0.326  Sum_probs=69.9

Q ss_pred             HHhcCCCCCCEEEEEcCCHHHHHHHHHHHHHCCCCeEEEEeCChhHHHHHHH----cCCC-EEEeCCCCcccHHHHHHHH
Q 017868          174 CRRANIGPETNVLIMGAGPIGLVTMLGAPRAFGAPRIVIVDVDDYRLSVAKE----IGAD-NIVKVSTNLQDIAEEVEKI  248 (365)
Q Consensus       174 ~~~~~~~~g~~vlI~G~g~~G~~ai~~l~~~~g~~~vi~v~~~~~~~~~~~~----~g~~-~~~~~~~~~~~~~~~i~~~  248 (365)
                      +++.++++|+++|=+|+|- |.+++- +|+..|. +|++++-+++..+.+++    .|.. .+-..   ..++    +++
T Consensus        65 ~~kl~L~~G~~lLDiGCGW-G~l~~~-aA~~y~v-~V~GvTlS~~Q~~~~~~r~~~~gl~~~v~v~---l~d~----rd~  134 (283)
T COG2230          65 LEKLGLKPGMTLLDIGCGW-GGLAIY-AAEEYGV-TVVGVTLSEEQLAYAEKRIAARGLEDNVEVR---LQDY----RDF  134 (283)
T ss_pred             HHhcCCCCCCEEEEeCCCh-hHHHHH-HHHHcCC-EEEEeeCCHHHHHHHHHHHHHcCCCcccEEE---eccc----ccc
Confidence            3778999999999999865 556666 7778888 79999999988766544    5654 21111   1222    112


Q ss_pred             HHHhCCCceEEEe-----CCCC---HHHHHHHHHhcccCCEEEEEccCCC
Q 017868          249 QKAMGTGIDVSFD-----CAGL---NKTMSTALGATCAGGKVCLVGMGHH  290 (365)
Q Consensus       249 ~~~~~~~~d~vid-----~~g~---~~~~~~~~~~l~~~G~~~~~g~~~~  290 (365)
                          ...||-|+.     .+|.   +.-+..+.++|+++|++.+......
T Consensus       135 ----~e~fDrIvSvgmfEhvg~~~~~~ff~~~~~~L~~~G~~llh~I~~~  180 (283)
T COG2230         135 ----EEPFDRIVSVGMFEHVGKENYDDFFKKVYALLKPGGRMLLHSITGP  180 (283)
T ss_pred             ----ccccceeeehhhHHHhCcccHHHHHHHHHhhcCCCceEEEEEecCC
Confidence                344888864     4443   3455678889999999998875543

>TIGR02469 CbiT precorrin-6Y C5,15-methyltransferase (decarboxylating), CbiT subunit

Probab=96.92  E-value=0.025  Score=43.18  Aligned_cols=102  Identities=21%  Similarity=0.297  Sum_probs=65.7

Q ss_pred             HhcCCCCCCEEEEEcCCHHHHHHHHHHHHHCCCCeEEEEeCChhHHHHH----HHcCCCEEEeCCCCcccHHHHHHHHHH
Q 017868          175 RRANIGPETNVLIMGAGPIGLVTMLGAPRAFGAPRIVIVDVDDYRLSVA----KEIGADNIVKVSTNLQDIAEEVEKIQK  250 (365)
Q Consensus       175 ~~~~~~~g~~vlI~G~g~~G~~ai~~l~~~~g~~~vi~v~~~~~~~~~~----~~~g~~~~~~~~~~~~~~~~~i~~~~~  250 (365)
                      ....+.++++||-.|+|. |..+.. +++..+...+++++.++...+.+    +.++...+.....+....   ...   
T Consensus        13 ~~~~~~~~~~vldlG~G~-G~~~~~-l~~~~~~~~v~~vD~s~~~~~~a~~~~~~~~~~~~~~~~~~~~~~---~~~---   84 (124)
T TIGR02469        13 SKLRLRPGDVLWDIGAGS-GSITIE-AARLVPNGRVYAIERNPEALRLIERNARRFGVSNIVIVEGDAPEA---LED---   84 (124)
T ss_pred             HHcCCCCCCEEEEeCCCC-CHHHHH-HHHHCCCceEEEEcCCHHHHHHHHHHHHHhCCCceEEEecccccc---Chh---
Confidence            445667788888899866 878888 77766555899999998876654    334443322211111110   111   


Q ss_pred             HhCCCceEEEeCCCC---HHHHHHHHHhcccCCEEEEE
Q 017868          251 AMGTGIDVSFDCAGL---NKTMSTALGATCAGGKVCLV  285 (365)
Q Consensus       251 ~~~~~~d~vid~~g~---~~~~~~~~~~l~~~G~~~~~  285 (365)
                       ....+|+|+.....   ...+..+.+.|+++|.+++.
T Consensus        85 -~~~~~D~v~~~~~~~~~~~~l~~~~~~Lk~gG~li~~  121 (124)
T TIGR02469        85 -SLPEPDRVFIGGSGGLLQEILEAIWRRLRPGGRIVLN  121 (124)
T ss_pred             -hcCCCCEEEECCcchhHHHHHHHHHHHcCCCCEEEEE
Confidence             13589999975432   23667899999999998864

This model recognizes the CbiT methylase which is responsible, in part (along with CbiE), for methylating precorrin-6y (or cobalt-precorrin-6y) at both the 5 and 15 positions as well as the concomitant decarbozylation at C-12. In many organisms, this protein is fused to the CbiE subunit. The fused protein, when found in organisms catalyzing the oxidative version of the cobalamin biosynthesis pathway, is called CobL.

>PF01135 PCMT: Protein-L-isoaspartate(D-aspartate) O-methyltransferase (PCMT); InterPro: IPR000682 Protein-L-isoaspartate(D-aspartate) O-methyltransferase (2

Probab=96.84  E-value=0.0045  Score=52.23  Aligned_cols=103  Identities=20%  Similarity=0.260  Sum_probs=64.2

Q ss_pred             HHHHhcCCCCCCEEEEEcCCHHHHHHHHHHHHHCCCC-eEEEEeCChhHHH----HHHHcCCCEEEeCCCC-cccHHHHH
Q 017868          172 HACRRANIGPETNVLIMGAGPIGLVTMLGAPRAFGAP-RIVIVDVDDYRLS----VAKEIGADNIVKVSTN-LQDIAEEV  245 (365)
Q Consensus       172 ~~~~~~~~~~g~~vlI~G~g~~G~~ai~~l~~~~g~~-~vi~v~~~~~~~~----~~~~~g~~~~~~~~~~-~~~~~~~i  245 (365)
                      .+++...+++|++||-.|+|. |..++- +++..|.. .|++++..++-.+    .++.++...+.....+ ...+.   
T Consensus        63 ~~l~~L~l~pg~~VLeIGtGs-GY~aAl-la~lvg~~g~Vv~vE~~~~l~~~A~~~l~~~~~~nv~~~~gdg~~g~~---  137 (209)
T PF01135_consen   63 RMLEALDLKPGDRVLEIGTGS-GYQAAL-LAHLVGPVGRVVSVERDPELAERARRNLARLGIDNVEVVVGDGSEGWP---  137 (209)
T ss_dssp             HHHHHTTC-TT-EEEEES-TT-SHHHHH-HHHHHSTTEEEEEEESBHHHHHHHHHHHHHHTTHSEEEEES-GGGTTG---
T ss_pred             HHHHHHhcCCCCEEEEecCCC-cHHHHH-HHHhcCccceEEEECccHHHHHHHHHHHHHhccCceeEEEcchhhccc---
Confidence            345777899999999998753 555555 66665643 5889988876443    4555676543322221 11110   


Q ss_pred             HHHHHHhCCCceEEEeCCCCHHHHHHHHHhcccCCEEEEE
Q 017868          246 EKIQKAMGTGIDVSFDCAGLNKTMSTALGATCAGGKVCLV  285 (365)
Q Consensus       246 ~~~~~~~~~~~d~vid~~g~~~~~~~~~~~l~~~G~~~~~  285 (365)
                            ...+||.|+-+.+.+..-...++.|+++|+++.-
T Consensus       138 ------~~apfD~I~v~~a~~~ip~~l~~qL~~gGrLV~p  171 (209)
T PF01135_consen  138 ------EEAPFDRIIVTAAVPEIPEALLEQLKPGGRLVAP  171 (209)
T ss_dssp             ------GG-SEEEEEESSBBSS--HHHHHTEEEEEEEEEE
T ss_pred             ------cCCCcCEEEEeeccchHHHHHHHhcCCCcEEEEE
Confidence                  1368999999877766667888999999999873

1.1.77 from EC) (PCMT) [] (which is also known as L-isoaspartyl protein carboxyl methyltransferase) is an enzyme that catalyses the transfer of a methyl group from S-adenosylmethionine to the free carboxyl groups of D-aspartyl or L-isoaspartyl residues in a variety of peptides and proteins. The enzyme does not act on normal L-aspartyl residues L-isoaspartyl and D-aspartyl are the products of the spontaneous deamidation and/or isomerisation of normal L-aspartyl and L-asparaginyl residues in proteins. PCMT plays a role in the repair and/or degradation of these damaged proteins; the enzymatic methyl esterification of the abnormal residues can lead to their conversion to normal L-aspartyl residues. The SAM domain is present in most of these proteins.; GO: 0004719 protein-L-isoaspartate (D-aspartate) O-methyltransferase activity, 0006464 protein modification process; PDB: 3LBF_A 1DL5_B 1JG3_B 1JG2_A 1JG1_A 1JG4_A 2YXE_A 2PBF_B 1VBF_C 1R18_A ....

>PRK12742 oxidoreductase; Provisional

Probab=96.79  E-value=0.03  Score=48.24  Aligned_cols=79  Identities=22%  Similarity=0.246  Sum_probs=46.3

Q ss_pred             CCCEEEEEcC-CHHHHHHHHHHHHHCCCCeEEEEeCChhHHH-HHHHcCCCEEEeCCCCcccHHHHHHHHHHHhCCCceE
Q 017868          181 PETNVLIMGA-GPIGLVTMLGAPRAFGAPRIVIVDVDDYRLS-VAKEIGADNIVKVSTNLQDIAEEVEKIQKAMGTGIDV  258 (365)
Q Consensus       181 ~g~~vlI~G~-g~~G~~ai~~l~~~~g~~~vi~v~~~~~~~~-~~~~~g~~~~~~~~~~~~~~~~~i~~~~~~~~~~~d~  258 (365)
                      +++++||+|+ |++|.++++ .+...|+++++...+++++.+ +..+++... +..+-  .+.. .+.+..+. .+++|+
T Consensus         5 ~~k~vlItGasggIG~~~a~-~l~~~G~~v~~~~~~~~~~~~~l~~~~~~~~-~~~D~--~~~~-~~~~~~~~-~~~id~   78 (237)
T PRK12742          5 TGKKVLVLGGSRGIGAAIVR-RFVTDGANVRFTYAGSKDAAERLAQETGATA-VQTDS--ADRD-AVIDVVRK-SGALDI   78 (237)
T ss_pred             CCCEEEEECCCChHHHHHHH-HHHHCCCEEEEecCCCHHHHHHHHHHhCCeE-EecCC--CCHH-HHHHHHHH-hCCCcE
Confidence            4679999987 999999999 445669854333333444433 445556543 22222  2222 23333222 257999


Q ss_pred             EEeCCCC
Q 017868          259 SFDCAGL  265 (365)
Q Consensus       259 vid~~g~  265 (365)
                      +|.++|.
T Consensus        79 li~~ag~   85 (237)
T PRK12742         79 LVVNAGI   85 (237)
T ss_pred             EEECCCC
Confidence            9998873

>PRK13942 protein-L-isoaspartate O-methyltransferase; Provisional

Probab=96.76  E-value=0.032  Score=47.42  Aligned_cols=103  Identities=17%  Similarity=0.200  Sum_probs=65.6

Q ss_pred             HHHhcCCCCCCEEEEEcCCHHHHHHHHHHHHHCCC-CeEEEEeCChhHHHHHH----HcCCCEEEeCCCCcccHHHHHHH
Q 017868          173 ACRRANIGPETNVLIMGAGPIGLVTMLGAPRAFGA-PRIVIVDVDDYRLSVAK----EIGADNIVKVSTNLQDIAEEVEK  247 (365)
Q Consensus       173 ~~~~~~~~~g~~vlI~G~g~~G~~ai~~l~~~~g~-~~vi~v~~~~~~~~~~~----~~g~~~~~~~~~~~~~~~~~i~~  247 (365)
                      .+....++++++||-.|+|. |..+.. +++..+. .+|++++.+++-.+.++    ..|...+.....+....      
T Consensus        68 ~~~~l~~~~g~~VLdIG~Gs-G~~t~~-la~~~~~~~~V~~vE~~~~~~~~a~~~l~~~g~~~v~~~~gd~~~~------  139 (212)
T PRK13942         68 MCELLDLKEGMKVLEIGTGS-GYHAAV-VAEIVGKSGKVVTIERIPELAEKAKKTLKKLGYDNVEVIVGDGTLG------  139 (212)
T ss_pred             HHHHcCCCCcCEEEEECCcc-cHHHHH-HHHhcCCCCEEEEEeCCHHHHHHHHHHHHHcCCCCeEEEECCcccC------
Confidence            34566789999999998754 555655 6666553 37999999987766543    34543222111111110      


Q ss_pred             HHHHhCCCceEEEeCCCCHHHHHHHHHhcccCCEEEEE
Q 017868          248 IQKAMGTGIDVSFDCAGLNKTMSTALGATCAGGKVCLV  285 (365)
Q Consensus       248 ~~~~~~~~~d~vid~~g~~~~~~~~~~~l~~~G~~~~~  285 (365)
                      +.  ...++|.|+-...........++.|+++|+++..
T Consensus       140 ~~--~~~~fD~I~~~~~~~~~~~~l~~~LkpgG~lvi~  175 (212)
T PRK13942        140 YE--ENAPYDRIYVTAAGPDIPKPLIEQLKDGGIMVIP  175 (212)
T ss_pred             CC--cCCCcCEEEECCCcccchHHHHHhhCCCcEEEEE
Confidence            00  1467999976554455666788899999998774

>COG3967 DltE Short-chain dehydrogenase involved in D-alanine esterification of lipoteichoic acid and wall teichoic acid (D-alanine transfer protein) [Cell envelope biogenesis, outer membrane]

Probab=96.76  E-value=0.015  Score=47.89  Aligned_cols=82  Identities=22%  Similarity=0.244  Sum_probs=52.9

Q ss_pred             CCCEEEEEcC-CHHHHHHHHHHHHHCCCCeEEEEeCChhHHHHHHHcCC-CEEEeCCCCcccHHHHHHHHHHHhCCCceE
Q 017868          181 PETNVLIMGA-GPIGLVTMLGAPRAFGAPRIVIVDVDDYRLSVAKEIGA-DNIVKVSTNLQDIAEEVEKIQKAMGTGIDV  258 (365)
Q Consensus       181 ~g~~vlI~G~-g~~G~~ai~~l~~~~g~~~vi~v~~~~~~~~~~~~~g~-~~~~~~~~~~~~~~~~i~~~~~~~~~~~d~  258 (365)
                      .|.+|||+|+ +++|++.++ -...+|- .||.+.+++++.+.+++... -+....+-.+.+-..++-++....--..++
T Consensus         4 tgnTiLITGG~sGIGl~lak-~f~elgN-~VIi~gR~e~~L~e~~~~~p~~~t~v~Dv~d~~~~~~lvewLkk~~P~lNv   81 (245)
T COG3967           4 TGNTILITGGASGIGLALAK-RFLELGN-TVIICGRNEERLAEAKAENPEIHTEVCDVADRDSRRELVEWLKKEYPNLNV   81 (245)
T ss_pred             cCcEEEEeCCcchhhHHHHH-HHHHhCC-EEEEecCcHHHHHHHHhcCcchheeeecccchhhHHHHHHHHHhhCCchhe
Confidence            4789999965 999999999 5566787 57788899999888776442 122222222233222333333323456899


Q ss_pred             EEeCCC
Q 017868          259 SFDCAG  264 (365)
Q Consensus       259 vid~~g  264 (365)
                      +++++|
T Consensus        82 liNNAG   87 (245)
T COG3967          82 LINNAG   87 (245)
T ss_pred             eeeccc
Confidence            999887

>PRK14967 putative methyltransferase; Provisional

Probab=96.71  E-value=0.038  Score=47.33  Aligned_cols=99  Identities=26%  Similarity=0.331  Sum_probs=63.4

Q ss_pred             HHhcCCCCCCEEEEEcCCHHHHHHHHHHHHHCCCCeEEEEeCChhHHHHHHH----cCCCEEEeCCCCcccHHHHHHHHH
Q 017868          174 CRRANIGPETNVLIMGAGPIGLVTMLGAPRAFGAPRIVIVDVDDYRLSVAKE----IGADNIVKVSTNLQDIAEEVEKIQ  249 (365)
Q Consensus       174 ~~~~~~~~g~~vlI~G~g~~G~~ai~~l~~~~g~~~vi~v~~~~~~~~~~~~----~g~~~~~~~~~~~~~~~~~i~~~~  249 (365)
                      +....++++++||-.|+|. |..++. +++. +...+++++.+++..+.+++    .+....+. .   .++.+.+    
T Consensus        29 l~~~~~~~~~~vLDlGcG~-G~~~~~-la~~-~~~~v~~vD~s~~~l~~a~~n~~~~~~~~~~~-~---~d~~~~~----   97 (223)
T PRK14967         29 LAAEGLGPGRRVLDLCTGS-GALAVA-AAAA-GAGSVTAVDISRRAVRSARLNALLAGVDVDVR-R---GDWARAV----   97 (223)
T ss_pred             HHhcccCCCCeEEEecCCH-HHHHHH-HHHc-CCCeEEEEECCHHHHHHHHHHHHHhCCeeEEE-E---Cchhhhc----
Confidence            3445678899999999976 887777 6654 66689999999887764433    44432221 1   2222211    


Q ss_pred             HHhCCCceEEEeCCC---C------------------------HHHHHHHHHhcccCCEEEEE
Q 017868          250 KAMGTGIDVSFDCAG---L------------------------NKTMSTALGATCAGGKVCLV  285 (365)
Q Consensus       250 ~~~~~~~d~vid~~g---~------------------------~~~~~~~~~~l~~~G~~~~~  285 (365)
                        ....+|+|+....   .                        ...+..+.+.|+++|+++++
T Consensus        98 --~~~~fD~Vi~npPy~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~a~~~Lk~gG~l~~~  158 (223)
T PRK14967         98 --EFRPFDVVVSNPPYVPAPPDAPPSRGPARAWDAGPDGRAVLDRLCDAAPALLAPGGSLLLV  158 (223)
T ss_pred             --cCCCeeEEEECCCCCCCCcccccccChhHhhhCCCcHHHHHHHHHHHHHHhcCCCcEEEEE
Confidence              1467999987421   0                        11344677899999998875

>KOG1209 consensus 1-Acyl dihydroxyacetone phosphate reductase and related dehydrogenases [Secondary metabolites biosynthesis, transport and catabolism]

Probab=96.71  E-value=0.041  Score=45.67  Aligned_cols=81  Identities=16%  Similarity=0.219  Sum_probs=53.0

Q ss_pred             CCCEEEEEcC--CHHHHHHHHHHHHHCCCCeEEEEeCChhHHHHH-HHcCCCEE-EeCCCCcccHHHHHHHHHHHhCCCc
Q 017868          181 PETNVLIMGA--GPIGLVTMLGAPRAFGAPRIVIVDVDDYRLSVA-KEIGADNI-VKVSTNLQDIAEEVEKIQKAMGTGI  256 (365)
Q Consensus       181 ~g~~vlI~G~--g~~G~~ai~~l~~~~g~~~vi~v~~~~~~~~~~-~~~g~~~~-~~~~~~~~~~~~~i~~~~~~~~~~~  256 (365)
                      ....|||+|+  |++|.+.+. -...-|+ .|+++.++-++...+ .++|...- .+. ++.++..+...+......++.
T Consensus         6 ~~k~VlItgcs~GGIG~ala~-ef~~~G~-~V~AtaR~~e~M~~L~~~~gl~~~kLDV-~~~~~V~~v~~evr~~~~Gkl   82 (289)
T KOG1209|consen    6 QPKKVLITGCSSGGIGYALAK-EFARNGY-LVYATARRLEPMAQLAIQFGLKPYKLDV-SKPEEVVTVSGEVRANPDGKL   82 (289)
T ss_pred             CCCeEEEeecCCcchhHHHHH-HHHhCCe-EEEEEccccchHhhHHHhhCCeeEEecc-CChHHHHHHHHHHhhCCCCce
Confidence            4568999974  999998888 4456699 688887877776655 47885332 222 233444443334433346789


Q ss_pred             eEEEeCCC
Q 017868          257 DVSFDCAG  264 (365)
Q Consensus       257 d~vid~~g  264 (365)
                      |+.++.+|
T Consensus        83 d~L~NNAG   90 (289)
T KOG1209|consen   83 DLLYNNAG   90 (289)
T ss_pred             EEEEcCCC
Confidence            99999776

>PF12847 Methyltransf_18: Methyltransferase domain; PDB: 3G2Q_A 3G2O_A 3G2M_B 3G2P_B 3D2L_B 1IM8_B 3NJR_A 3E05_H 3EVZ_A 3HM2_A

Probab=96.67  E-value=0.015  Score=43.59  Aligned_cols=94  Identities=28%  Similarity=0.347  Sum_probs=60.7

Q ss_pred             CCCEEEEEcCCHHHHHHHHHHHH-HCCCCeEEEEeCChhHHHHHHHc----CC-CEEEeCCCCcccHHHHHHHHHHHhCC
Q 017868          181 PETNVLIMGAGPIGLVTMLGAPR-AFGAPRIVIVDVDDYRLSVAKEI----GA-DNIVKVSTNLQDIAEEVEKIQKAMGT  254 (365)
Q Consensus       181 ~g~~vlI~G~g~~G~~ai~~l~~-~~g~~~vi~v~~~~~~~~~~~~~----g~-~~~~~~~~~~~~~~~~i~~~~~~~~~  254 (365)
                      |+.+||-.|+|. |..++. +++ ..++ ++++++.+++..+.+++.    +. +.+.....   ++ ....    ....
T Consensus         1 p~~~vLDlGcG~-G~~~~~-l~~~~~~~-~v~gvD~s~~~~~~a~~~~~~~~~~~~i~~~~~---d~-~~~~----~~~~   69 (112)
T PF12847_consen    1 PGGRVLDLGCGT-GRLSIA-LARLFPGA-RVVGVDISPEMLEIARERAAEEGLSDRITFVQG---DA-EFDP----DFLE   69 (112)
T ss_dssp             TTCEEEEETTTT-SHHHHH-HHHHHTTS-EEEEEESSHHHHHHHHHHHHHTTTTTTEEEEES---CC-HGGT----TTSS
T ss_pred             CCCEEEEEcCcC-CHHHHH-HHhcCCCC-EEEEEeCCHHHHHHHHHHHHhcCCCCCeEEEEC---cc-ccCc----ccCC
Confidence            678999999865 777777 655 4566 799999999887766542    22 22222112   22 1111    1246


Q ss_pred             CceEEEeCC-CC---H------HHHHHHHHhcccCCEEEEE
Q 017868          255 GIDVSFDCA-GL---N------KTMSTALGATCAGGKVCLV  285 (365)
Q Consensus       255 ~~d~vid~~-g~---~------~~~~~~~~~l~~~G~~~~~  285 (365)
                      ++|+|+... ..   .      ..+..+.+.|+++|++++-
T Consensus        70 ~~D~v~~~~~~~~~~~~~~~~~~~l~~~~~~L~pgG~lvi~  110 (112)
T PF12847_consen   70 PFDLVICSGFTLHFLLPLDERRRVLERIRRLLKPGGRLVIN  110 (112)
T ss_dssp             CEEEEEECSGSGGGCCHHHHHHHHHHHHHHHEEEEEEEEEE
T ss_pred             CCCEEEECCCccccccchhHHHHHHHHHHHhcCCCcEEEEE
Confidence            799999866 21   1      2367888999999998763

...

>PRK08017 oxidoreductase; Provisional

Probab=96.66  E-value=0.021  Score=49.89  Aligned_cols=79  Identities=19%  Similarity=0.300  Sum_probs=50.8

Q ss_pred             CEEEEEcC-CHHHHHHHHHHHHHCCCCeEEEEeCChhHHHHHHHcCCCEEEeCCC-CcccHHHHHHHHHHHhCCCceEEE
Q 017868          183 TNVLIMGA-GPIGLVTMLGAPRAFGAPRIVIVDVDDYRLSVAKEIGADNIVKVST-NLQDIAEEVEKIQKAMGTGIDVSF  260 (365)
Q Consensus       183 ~~vlI~G~-g~~G~~ai~~l~~~~g~~~vi~v~~~~~~~~~~~~~g~~~~~~~~~-~~~~~~~~i~~~~~~~~~~~d~vi  260 (365)
                      +++||+|+ |.+|.++++.+ ...|+ .++++.++.++.+.+++.++.... .+- +..++.+.+..+....++.+|.++
T Consensus         3 k~vlVtGasg~IG~~la~~l-~~~g~-~v~~~~r~~~~~~~~~~~~~~~~~-~D~~~~~~~~~~~~~i~~~~~~~~~~ii   79 (256)
T PRK08017          3 KSVLITGCSSGIGLEAALEL-KRRGY-RVLAACRKPDDVARMNSLGFTGIL-LDLDDPESVERAADEVIALTDNRLYGLF   79 (256)
T ss_pred             CEEEEECCCChHHHHHHHHH-HHCCC-EEEEEeCCHHHhHHHHhCCCeEEE-eecCCHHHHHHHHHHHHHhcCCCCeEEE
Confidence            47999998 99999999945 45688 577788888888777777754332 221 112222223333222245789988


Q ss_pred             eCCC
Q 017868          261 DCAG  264 (365)
Q Consensus       261 d~~g  264 (365)
                      .+.|
T Consensus        80 ~~ag   83 (256)
T PRK08017         80 NNAG   83 (256)
T ss_pred             ECCC
Confidence            8776

>PRK06182 short chain dehydrogenase; Validated

Probab=96.65  E-value=0.022  Score=50.31  Aligned_cols=81  Identities=23%  Similarity=0.254  Sum_probs=52.2

Q ss_pred             CCCEEEEEcC-CHHHHHHHHHHHHHCCCCeEEEEeCChhHHHHHHHcCCCEE-EeCCCCcccHHHHHHHHHHHhCCCceE
Q 017868          181 PETNVLIMGA-GPIGLVTMLGAPRAFGAPRIVIVDVDDYRLSVAKEIGADNI-VKVSTNLQDIAEEVEKIQKAMGTGIDV  258 (365)
Q Consensus       181 ~g~~vlI~G~-g~~G~~ai~~l~~~~g~~~vi~v~~~~~~~~~~~~~g~~~~-~~~~~~~~~~~~~i~~~~~~~~~~~d~  258 (365)
                      ++.+++|+|+ |++|..+++.+ ...|+ .|+++.+++++.+.+...++..+ .++ .+.+++...+++..+. .+++|+
T Consensus         2 ~~k~vlItGasggiG~~la~~l-~~~G~-~V~~~~r~~~~l~~~~~~~~~~~~~Dv-~~~~~~~~~~~~~~~~-~~~id~   77 (273)
T PRK06182          2 QKKVALVTGASSGIGKATARRL-AAQGY-TVYGAARRVDKMEDLASLGVHPLSLDV-TDEASIKAAVDTIIAE-EGRIDV   77 (273)
T ss_pred             CCCEEEEECCCChHHHHHHHHH-HHCCC-EEEEEeCCHHHHHHHHhCCCeEEEeeC-CCHHHHHHHHHHHHHh-cCCCCE
Confidence            3578999987 99999999945 45698 57777787777655544454332 222 2233444444444332 458999


Q ss_pred             EEeCCCC
Q 017868          259 SFDCAGL  265 (365)
Q Consensus       259 vid~~g~  265 (365)
                      +|.+.|.
T Consensus        78 li~~ag~   84 (273)
T PRK06182         78 LVNNAGY   84 (273)
T ss_pred             EEECCCc
Confidence            9998873

>PF06325 PrmA: Ribosomal protein L11 methyltransferase (PrmA); InterPro: IPR010456 This family consists of several Ribosomal protein L11 methyltransferase sequences

Probab=96.64  E-value=0.01  Score=52.84  Aligned_cols=134  Identities=19%  Similarity=0.313  Sum_probs=72.7

Q ss_pred             ceeeEEeecCCceEECCCCCCcchhccchhhHHHHHHH---HhcCCCCCCEEEEEcCCHHHHHHHHHHHHHCCCCeEEEE
Q 017868          137 SLANQVVHPADLCFKLPDNVSLEEGAMCEPLSVGLHAC---RRANIGPETNVLIMGAGPIGLVTMLGAPRAFGAPRIVIV  213 (365)
Q Consensus       137 ~~~~~~~v~~~~~~~iP~~~~~~~a~~~~~~~~a~~~~---~~~~~~~g~~vlI~G~g~~G~~ai~~l~~~~g~~~vi~v  213 (365)
                      .|.+|-.-+....+.+.+++.|-..    ...|...++   +.. .++|++||=.|+|. |.+++. . ..+|++.|+++
T Consensus       119 ~w~~~~~~~~~~~I~idPg~AFGTG----~H~TT~lcl~~l~~~-~~~g~~vLDvG~GS-GILaia-A-~klGA~~v~a~  190 (295)
T PF06325_consen  119 SWEEYPEPPDEIVIEIDPGMAFGTG----HHPTTRLCLELLEKY-VKPGKRVLDVGCGS-GILAIA-A-AKLGAKKVVAI  190 (295)
T ss_dssp             TT----SSTTSEEEEESTTSSS-SS----HCHHHHHHHHHHHHH-SSTTSEEEEES-TT-SHHHHH-H-HHTTBSEEEEE
T ss_pred             CCcccCCCCCcEEEEECCCCcccCC----CCHHHHHHHHHHHHh-ccCCCEEEEeCCcH-HHHHHH-H-HHcCCCeEEEe
Confidence            3555522234556777766554333    333433333   332 57889998888743 444443 3 34599999999


Q ss_pred             eCChhHHHH----HHHcCCCEEEeCCCCcccHHHHHHHHHHHhCCCceEEEeCCCCHH---HHHHHHHhcccCCEEEEEc
Q 017868          214 DVDDYRLSV----AKEIGADNIVKVSTNLQDIAEEVEKIQKAMGTGIDVSFDCAGLNK---TMSTALGATCAGGKVCLVG  286 (365)
Q Consensus       214 ~~~~~~~~~----~~~~g~~~~~~~~~~~~~~~~~i~~~~~~~~~~~d~vid~~g~~~---~~~~~~~~l~~~G~~~~~g  286 (365)
                      |.++...+.    ++.-+....+.... ..+.          ...++|+|+-..-..-   ......++++++|.+++.|
T Consensus       191 DiDp~Av~~a~~N~~~N~~~~~~~v~~-~~~~----------~~~~~dlvvANI~~~vL~~l~~~~~~~l~~~G~lIlSG  259 (295)
T PF06325_consen  191 DIDPLAVEAARENAELNGVEDRIEVSL-SEDL----------VEGKFDLVVANILADVLLELAPDIASLLKPGGYLILSG  259 (295)
T ss_dssp             ESSCHHHHHHHHHHHHTT-TTCEEESC-TSCT----------CCS-EEEEEEES-HHHHHHHHHHCHHHEEEEEEEEEEE
T ss_pred             cCCHHHHHHHHHHHHHcCCCeeEEEEE-eccc----------ccccCCEEEECCCHHHHHHHHHHHHHhhCCCCEEEEcc
Confidence            998865443    33334332221111 1111          1368999998776432   3335566889999999987


Q ss_pred             cCC
Q 017868          287 MGH  289 (365)
Q Consensus       287 ~~~  289 (365)
                      ...
T Consensus       260 Il~  262 (295)
T PF06325_consen  260 ILE  262 (295)
T ss_dssp             EEG
T ss_pred             ccH
Confidence            543

Its genetic determinant is prmA, which forms a bifunctional operon with the downstream panF gene []. The role of L11 methylation in ribosome function is, as yet, unknown. Deletion of the prmA gene in Escherichia coli showed no obvious effect [] except for the production of undermethylated forms of L11 []. Methylation is the most common post-transcriptional modification to ribosomal proteins in all organisms. PrmA is the only bacterial enzyme that catalyses the methylation of a ribosomal protein [].; GO: 0008276 protein methyltransferase activity, 0006479 protein methylation, 0005737 cytoplasm; PDB: 3GRZ_B 1F3L_A 2NXJ_B 3CJT_I 3CJQ_G 2NXE_A 2NXC_A 2ZBP_A 3EGV_A 3CJS_A ....

>PRK05693 short chain dehydrogenase; Provisional

Probab=96.60  E-value=0.023  Score=50.25  Aligned_cols=78  Identities=22%  Similarity=0.270  Sum_probs=50.9

Q ss_pred             CEEEEEcC-CHHHHHHHHHHHHHCCCCeEEEEeCChhHHHHHHHcCCCEE-EeCCCCcccHHHHHHHHHHHhCCCceEEE
Q 017868          183 TNVLIMGA-GPIGLVTMLGAPRAFGAPRIVIVDVDDYRLSVAKEIGADNI-VKVSTNLQDIAEEVEKIQKAMGTGIDVSF  260 (365)
Q Consensus       183 ~~vlI~G~-g~~G~~ai~~l~~~~g~~~vi~v~~~~~~~~~~~~~g~~~~-~~~~~~~~~~~~~i~~~~~~~~~~~d~vi  260 (365)
                      .++||+|+ |++|..+++.+ ...|+ .|+++++++++.+.+...+.... .++ .+.+++.+.+..+.+. .+++|++|
T Consensus         2 k~vlItGasggiG~~la~~l-~~~G~-~V~~~~r~~~~~~~~~~~~~~~~~~Dl-~~~~~~~~~~~~~~~~-~~~id~vi   77 (274)
T PRK05693          2 PVVLITGCSSGIGRALADAF-KAAGY-EVWATARKAEDVEALAAAGFTAVQLDV-NDGAALARLAEELEAE-HGGLDVLI   77 (274)
T ss_pred             CEEEEecCCChHHHHHHHHH-HHCCC-EEEEEeCCHHHHHHHHHCCCeEEEeeC-CCHHHHHHHHHHHHHh-cCCCCEEE
Confidence            47899987 99999999944 56698 57777787777666555554332 222 2223444444444332 35799999


Q ss_pred             eCCC
Q 017868          261 DCAG  264 (365)
Q Consensus       261 d~~g  264 (365)
                      .+.|
T Consensus        78 ~~ag   81 (274)
T PRK05693         78 NNAG   81 (274)
T ss_pred             ECCC
Confidence            9988

>TIGR00438 rrmJ cell division protein FtsJ

Probab=96.58  E-value=0.044  Score=45.53  Aligned_cols=102  Identities=18%  Similarity=0.256  Sum_probs=59.3

Q ss_pred             cCCCCCCEEEEEcCCHHHHHHHHHHHHHCCCCeEEEEeCChhHHHHHHHcCCCEEEeCCCCcccHHHHHHHHHHHhCCCc
Q 017868          177 ANIGPETNVLIMGAGPIGLVTMLGAPRAFGAPRIVIVDVDDYRLSVAKEIGADNIVKVSTNLQDIAEEVEKIQKAMGTGI  256 (365)
Q Consensus       177 ~~~~~g~~vlI~G~g~~G~~ai~~l~~~~g~~~vi~v~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~i~~~~~~~~~~~  256 (365)
                      ..+++|++||..|+|.-+. +..+..+..+...+++++.++.+    ...++. .+..+....+....+++..  ...++
T Consensus        28 ~~i~~g~~VLDiG~GtG~~-~~~l~~~~~~~~~v~~vDis~~~----~~~~i~-~~~~d~~~~~~~~~l~~~~--~~~~~   99 (188)
T TIGR00438        28 KLIKPGDTVLDLGAAPGGW-SQVAVEQVGGKGRVIAVDLQPMK----PIENVD-FIRGDFTDEEVLNKIRERV--GDDKV   99 (188)
T ss_pred             cccCCCCEEEEecCCCCHH-HHHHHHHhCCCceEEEEeccccc----cCCCce-EEEeeCCChhHHHHHHHHh--CCCCc
Confidence            5678999999999866343 33413333344479999988754    112332 2221221122222333222  25679


Q ss_pred             eEEEeC-----CCC------------HHHHHHHHHhcccCCEEEEEc
Q 017868          257 DVSFDC-----AGL------------NKTMSTALGATCAGGKVCLVG  286 (365)
Q Consensus       257 d~vid~-----~g~------------~~~~~~~~~~l~~~G~~~~~g  286 (365)
                      |+|+..     .|.            ...+..+.++|+++|+++...
T Consensus       100 D~V~~~~~~~~~g~~~~~~~~~~~~~~~~l~~~~~~LkpgG~lvi~~  146 (188)
T TIGR00438       100 DVVMSDAAPNISGYWDIDHLRSIDLVELALDIAKEVLKPKGNFVVKV  146 (188)
T ss_pred             cEEEcCCCCCCCCCccccHHHHHHHHHHHHHHHHHHccCCCEEEEEE
Confidence            999952     121            245667889999999998753

>PRK08618 ornithine cyclodeaminase; Validated

Probab=96.53  E-value=0.098  Score=47.61  Aligned_cols=102  Identities=14%  Similarity=0.093  Sum_probs=68.2

Q ss_pred             HHhcCCCCCCEEEEEcCCHHHHHHHHHHHHHCCCCeEEEEeCChhHHH-HHHHc----CCCEEEeCCCCcccHHHHHHHH
Q 017868          174 CRRANIGPETNVLIMGAGPIGLVTMLGAPRAFGAPRIVIVDVDDYRLS-VAKEI----GADNIVKVSTNLQDIAEEVEKI  248 (365)
Q Consensus       174 ~~~~~~~~g~~vlI~G~g~~G~~ai~~l~~~~g~~~vi~v~~~~~~~~-~~~~~----g~~~~~~~~~~~~~~~~~i~~~  248 (365)
                      .+...-+...+++|.|+|..|.+.+..++...+++.+.+.++++++.+ +++++    +.. +..+    .++.+.+   
T Consensus       119 ~~~la~~~~~~v~iiGaG~~a~~~~~al~~~~~~~~v~v~~r~~~~a~~~~~~~~~~~~~~-~~~~----~~~~~~~---  190 (325)
T PRK08618        119 TKYLAREDAKTLCLIGTGGQAKGQLEAVLAVRDIERVRVYSRTFEKAYAFAQEIQSKFNTE-IYVV----NSADEAI---  190 (325)
T ss_pred             HHHhcCCCCcEEEEECCcHHHHHHHHHHHhcCCccEEEEECCCHHHHHHHHHHHHHhcCCc-EEEe----CCHHHHH---
Confidence            344333456789999999999887774556678889999999888765 44433    432 2222    2222222   


Q ss_pred             HHHhCCCceEEEeCCCCHHHHHHHHHhcccCCEEEEEccCCC
Q 017868          249 QKAMGTGIDVSFDCAGLNKTMSTALGATCAGGKVCLVGMGHH  290 (365)
Q Consensus       249 ~~~~~~~~d~vid~~g~~~~~~~~~~~l~~~G~~~~~g~~~~  290 (365)
                           ...|+|+.|+.+. ..... ..++++-+++.+|...+
T Consensus       191 -----~~aDiVi~aT~s~-~p~i~-~~l~~G~hV~~iGs~~p  225 (325)
T PRK08618        191 -----EEADIIVTVTNAK-TPVFS-EKLKKGVHINAVGSFMP  225 (325)
T ss_pred             -----hcCCEEEEccCCC-CcchH-HhcCCCcEEEecCCCCc
Confidence                 4689999999876 33344 88999999988886543

>PRK11705 cyclopropane fatty acyl phospholipid synthase; Provisional

Probab=96.53  E-value=0.048  Score=50.76  Aligned_cols=99  Identities=21%  Similarity=0.255  Sum_probs=67.6

Q ss_pred             HhcCCCCCCEEEEEcCCHHHHHHHHHHHHHCCCCeEEEEeCChhHHHHHHHcCCCEEEeCCCCcccHHHHHHHHHHHhCC
Q 017868          175 RRANIGPETNVLIMGAGPIGLVTMLGAPRAFGAPRIVIVDVDDYRLSVAKEIGADNIVKVSTNLQDIAEEVEKIQKAMGT  254 (365)
Q Consensus       175 ~~~~~~~g~~vlI~G~g~~G~~ai~~l~~~~g~~~vi~v~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~i~~~~~~~~~  254 (365)
                      +..++++|++||-+|+| .|..+.. +++..|+ .|++++.+++..+.+++......+.+..  .++.    ++    .+
T Consensus       161 ~~l~l~~g~rVLDIGcG-~G~~a~~-la~~~g~-~V~giDlS~~~l~~A~~~~~~l~v~~~~--~D~~----~l----~~  227 (383)
T PRK11705        161 RKLQLKPGMRVLDIGCG-WGGLARY-AAEHYGV-SVVGVTISAEQQKLAQERCAGLPVEIRL--QDYR----DL----NG  227 (383)
T ss_pred             HHhCCCCCCEEEEeCCC-ccHHHHH-HHHHCCC-EEEEEeCCHHHHHHHHHHhccCeEEEEE--Cchh----hc----CC
Confidence            56788999999999985 3667777 7777788 6999999999988887643211111111  1221    11    35


Q ss_pred             CceEEEe-----CCCC---HHHHHHHHHhcccCCEEEEEc
Q 017868          255 GIDVSFD-----CAGL---NKTMSTALGATCAGGKVCLVG  286 (365)
Q Consensus       255 ~~d~vid-----~~g~---~~~~~~~~~~l~~~G~~~~~g  286 (365)
                      .+|.|+.     .+|.   ...+..+.++|+++|.+++..
T Consensus       228 ~fD~Ivs~~~~ehvg~~~~~~~l~~i~r~LkpGG~lvl~~  267 (383)
T PRK11705        228 QFDRIVSVGMFEHVGPKNYRTYFEVVRRCLKPDGLFLLHT  267 (383)
T ss_pred             CCCEEEEeCchhhCChHHHHHHHHHHHHHcCCCcEEEEEE
Confidence            7999875     2333   245677888999999998764

>TIGR00080 pimt protein-L-isoaspartate(D-aspartate) O-methyltransferase

Probab=96.52  E-value=0.044  Score=46.68  Aligned_cols=103  Identities=17%  Similarity=0.206  Sum_probs=64.3

Q ss_pred             HHHhcCCCCCCEEEEEcCCHHHHHHHHHHHHHCCC-CeEEEEeCChhHHHHH----HHcCCCEEEeCCCCcccHHHHHHH
Q 017868          173 ACRRANIGPETNVLIMGAGPIGLVTMLGAPRAFGA-PRIVIVDVDDYRLSVA----KEIGADNIVKVSTNLQDIAEEVEK  247 (365)
Q Consensus       173 ~~~~~~~~~g~~vlI~G~g~~G~~ai~~l~~~~g~-~~vi~v~~~~~~~~~~----~~~g~~~~~~~~~~~~~~~~~i~~  247 (365)
                      .++...++++++||-.|+|. |..++. +++..+. ..|++++.+++..+.+    ++++.+.+.....+..   +... 
T Consensus        69 ~~~~l~~~~~~~VLDiG~Gs-G~~a~~-la~~~~~~g~V~~vD~~~~~~~~A~~~~~~~g~~~v~~~~~d~~---~~~~-  142 (215)
T TIGR00080        69 MTELLELKPGMKVLEIGTGS-GYQAAV-LAEIVGRDGLVVSIERIPELAEKAERRLRKLGLDNVIVIVGDGT---QGWE-  142 (215)
T ss_pred             HHHHhCCCCcCEEEEECCCc-cHHHHH-HHHHhCCCCEEEEEeCCHHHHHHHHHHHHHCCCCCeEEEECCcc---cCCc-
Confidence            34556789999999998754 555555 6655443 2589999988766554    4455543322211111   1110 


Q ss_pred             HHHHhCCCceEEEeCCCCHHHHHHHHHhcccCCEEEEE
Q 017868          248 IQKAMGTGIDVSFDCAGLNKTMSTALGATCAGGKVCLV  285 (365)
Q Consensus       248 ~~~~~~~~~d~vid~~g~~~~~~~~~~~l~~~G~~~~~  285 (365)
                          ...++|+|+-............+.|+++|+++..
T Consensus       143 ----~~~~fD~Ii~~~~~~~~~~~~~~~L~~gG~lv~~  176 (215)
T TIGR00080       143 ----PLAPYDRIYVTAAGPKIPEALIDQLKEGGILVMP  176 (215)
T ss_pred             ----ccCCCCEEEEcCCcccccHHHHHhcCcCcEEEEE
Confidence                1357999886544444556788899999998764

Among the prokaryotes, the gene name is pcm. Among eukaryotes, pimt.

>KOG1205 consensus Predicted dehydrogenase [Secondary metabolites biosynthesis, transport and catabolism]

Probab=96.51  E-value=0.081  Score=46.55  Aligned_cols=81  Identities=22%  Similarity=0.283  Sum_probs=49.1

Q ss_pred             CCCEEEEEcC-CHHHHHHHHHHHHHCCCCeEEEEeCChhHHH----HHHHcCCCE-EEeCC---CCcccHHHHHHHHHHH
Q 017868          181 PETNVLIMGA-GPIGLVTMLGAPRAFGAPRIVIVDVDDYRLS----VAKEIGADN-IVKVS---TNLQDIAEEVEKIQKA  251 (365)
Q Consensus       181 ~g~~vlI~G~-g~~G~~ai~~l~~~~g~~~vi~v~~~~~~~~----~~~~~g~~~-~~~~~---~~~~~~~~~i~~~~~~  251 (365)
                      .|..|+|+|| +++|.+.+..+++ .|++.+.++ +..++.+    .+++.+... ++.+.   .+.++..+.+..... 
T Consensus        11 ~~kvVvITGASsGIG~~lA~~la~-~G~~l~lva-r~~rrl~~v~~~l~~~~~~~~v~~~~~Dvs~~~~~~~~~~~~~~-   87 (282)
T KOG1205|consen   11 AGKVVLITGASSGIGEALAYELAK-RGAKLVLVA-RRARRLERVAEELRKLGSLEKVLVLQLDVSDEESVKKFVEWAIR-   87 (282)
T ss_pred             CCCEEEEeCCCcHHHHHHHHHHHh-CCCceEEee-hhhhhHHHHHHHHHHhCCcCccEEEeCccCCHHHHHHHHHHHHH-
Confidence            4678999998 8999988875654 499644444 4554443    445555443 33221   223444444433332 


Q ss_pred             hCCCceEEEeCCC
Q 017868          252 MGTGIDVSFDCAG  264 (365)
Q Consensus       252 ~~~~~d~vid~~g  264 (365)
                      .-+++|+.++.+|
T Consensus        88 ~fg~vDvLVNNAG  100 (282)
T KOG1205|consen   88 HFGRVDVLVNNAG  100 (282)
T ss_pred             hcCCCCEEEecCc
Confidence            2478999999887

>PRK13944 protein-L-isoaspartate O-methyltransferase; Provisional

Probab=96.46  E-value=0.078  Score=44.76  Aligned_cols=102  Identities=16%  Similarity=0.196  Sum_probs=63.5

Q ss_pred             HHhcCCCCCCEEEEEcCCHHHHHHHHHHHHHCC-CCeEEEEeCChhHHHHHH----HcCCCE-EEeCCCCcccHHHHHHH
Q 017868          174 CRRANIGPETNVLIMGAGPIGLVTMLGAPRAFG-APRIVIVDVDDYRLSVAK----EIGADN-IVKVSTNLQDIAEEVEK  247 (365)
Q Consensus       174 ~~~~~~~~g~~vlI~G~g~~G~~ai~~l~~~~g-~~~vi~v~~~~~~~~~~~----~~g~~~-~~~~~~~~~~~~~~i~~  247 (365)
                      ++...++++++||-.|+|. |..++. +++..+ ...+++++.+++-.+.++    +.+... +.....+..   +.+. 
T Consensus        65 ~~~l~~~~~~~VLDiG~Gs-G~~~~~-la~~~~~~g~V~~iD~~~~~~~~a~~~l~~~~~~~~v~~~~~d~~---~~~~-  138 (205)
T PRK13944         65 CELIEPRPGMKILEVGTGS-GYQAAV-CAEAIERRGKVYTVEIVKELAIYAAQNIERLGYWGVVEVYHGDGK---RGLE-  138 (205)
T ss_pred             HHhcCCCCCCEEEEECcCc-cHHHHH-HHHhcCCCCEEEEEeCCHHHHHHHHHHHHHcCCCCcEEEEECCcc---cCCc-
Confidence            4566788999999998754 655555 555554 237999999987655443    445431 111111111   1111 


Q ss_pred             HHHHhCCCceEEEeCCCCHHHHHHHHHhcccCCEEEEE
Q 017868          248 IQKAMGTGIDVSFDCAGLNKTMSTALGATCAGGKVCLV  285 (365)
Q Consensus       248 ~~~~~~~~~d~vid~~g~~~~~~~~~~~l~~~G~~~~~  285 (365)
                          ....+|.|+-...........++.|+++|+++..
T Consensus       139 ----~~~~fD~Ii~~~~~~~~~~~l~~~L~~gG~lvi~  172 (205)
T PRK13944        139 ----KHAPFDAIIVTAAASTIPSALVRQLKDGGVLVIP  172 (205)
T ss_pred             ----cCCCccEEEEccCcchhhHHHHHhcCcCcEEEEE
Confidence                1358999987655444556788999999998763

>PF02353 CMAS: Mycolic acid cyclopropane synthetase; InterPro: IPR003333 This entry represents mycolic acid cyclopropane synthases and related enzymes, including CmaA1, CmaA2 (cyclopropane mycolic acid synthase A1 and A2) and MmaA1-4 (methoxymycolic acid synthase A1-4)

Probab=96.43  E-value=0.011  Score=52.29  Aligned_cols=100  Identities=21%  Similarity=0.351  Sum_probs=57.9

Q ss_pred             HHhcCCCCCCEEEEEcCCHHHHHHHHHHHHHCCCCeEEEEeCChhHHHHHH----HcCCCEEEeCCCCcccHHHHHHHHH
Q 017868          174 CRRANIGPETNVLIMGAGPIGLVTMLGAPRAFGAPRIVIVDVDDYRLSVAK----EIGADNIVKVSTNLQDIAEEVEKIQ  249 (365)
Q Consensus       174 ~~~~~~~~g~~vlI~G~g~~G~~ai~~l~~~~g~~~vi~v~~~~~~~~~~~----~~g~~~~~~~~~~~~~~~~~i~~~~  249 (365)
                      ++++++++|++||-+|+|- |..++. +++..|+ +|.+++.+++..+.++    +.|....+.+..  .|+.    ++ 
T Consensus        55 ~~~~~l~~G~~vLDiGcGw-G~~~~~-~a~~~g~-~v~gitlS~~Q~~~a~~~~~~~gl~~~v~v~~--~D~~----~~-  124 (273)
T PF02353_consen   55 CEKLGLKPGDRVLDIGCGW-GGLAIY-AAERYGC-HVTGITLSEEQAEYARERIREAGLEDRVEVRL--QDYR----DL-  124 (273)
T ss_dssp             HTTTT--TT-EEEEES-TT-SHHHHH-HHHHH---EEEEEES-HHHHHHHHHHHHCSTSSSTEEEEE--S-GG----G--
T ss_pred             HHHhCCCCCCEEEEeCCCc-cHHHHH-HHHHcCc-EEEEEECCHHHHHHHHHHHHhcCCCCceEEEE--eecc----cc-
Confidence            4678999999999999863 555666 6667799 6899999988877653    456432111101  2221    12 


Q ss_pred             HHhCCCceEEEe-----CCCC---HHHHHHHHHhcccCCEEEEEc
Q 017868          250 KAMGTGIDVSFD-----CAGL---NKTMSTALGATCAGGKVCLVG  286 (365)
Q Consensus       250 ~~~~~~~d~vid-----~~g~---~~~~~~~~~~l~~~G~~~~~g  286 (365)
                         ..++|.|+.     .+|.   +..+..+.+.|+|+|+++...
T Consensus       125 ---~~~fD~IvSi~~~Ehvg~~~~~~~f~~~~~~LkpgG~~~lq~  166 (273)
T PF02353_consen  125 ---PGKFDRIVSIEMFEHVGRKNYPAFFRKISRLLKPGGRLVLQT  166 (273)
T ss_dssp             -----S-SEEEEESEGGGTCGGGHHHHHHHHHHHSETTEEEEEEE
T ss_pred             ---CCCCCEEEEEechhhcChhHHHHHHHHHHHhcCCCcEEEEEe
Confidence               248898865     4543   345678889999999997653

All are thought to be S-adenosyl-L-methionine (SAM) utilising methyltransferases []. Mycolic acid cyclopropane synthase or cyclopropane-fatty-acyl-phospholipid synthase (CFA synthase) 2.1.1.79 from EC catalyses the reaction: S-adenosyl-L-methionine + phospholipid olefinic fatty acid -> S-adenosyl-L-homocysteine + phospholipid cyclopropane fatty acid. The major mycolic acid produced by Mycobacterium tuberculosis contains two cis-cyclopropanes in the meromycolate chain. Cyclopropanation may contribute to the structural integrity of the cell wall complex [].; GO: 0008610 lipid biosynthetic process; PDB: 3HA5_A 2FK8_A 3HA7_A 3HA3_A 2FK7_A 1KPG_D 1KP9_B 1KPH_D 3VC2_E 3VC1_D ....

>PRK06139 short chain dehydrogenase; Provisional

Probab=96.36  E-value=0.044  Score=50.03  Aligned_cols=81  Identities=26%  Similarity=0.375  Sum_probs=50.0

Q ss_pred             CCCEEEEEcC-CHHHHHHHHHHHHHCCCCeEEEEeCChhHHHH----HHHcCCCEE-EeCCC-CcccHHHHHHHHHHHhC
Q 017868          181 PETNVLIMGA-GPIGLVTMLGAPRAFGAPRIVIVDVDDYRLSV----AKEIGADNI-VKVST-NLQDIAEEVEKIQKAMG  253 (365)
Q Consensus       181 ~g~~vlI~G~-g~~G~~ai~~l~~~~g~~~vi~v~~~~~~~~~----~~~~g~~~~-~~~~~-~~~~~~~~i~~~~~~~~  253 (365)
                      .++++||+|+ +++|.++++.+ ...|+ +|+.+++++++.+.    +++.|.... +..+- +.++..+.+.++.+ ..
T Consensus         6 ~~k~vlITGAs~GIG~aia~~l-a~~G~-~Vvl~~R~~~~l~~~~~~~~~~g~~~~~~~~Dv~d~~~v~~~~~~~~~-~~   82 (330)
T PRK06139          6 HGAVVVITGASSGIGQATAEAF-ARRGA-RLVLAARDEEALQAVAEECRALGAEVLVVPTDVTDADQVKALATQAAS-FG   82 (330)
T ss_pred             CCCEEEEcCCCCHHHHHHHHHH-HHCCC-EEEEEECCHHHHHHHHHHHHhcCCcEEEEEeeCCCHHHHHHHHHHHHH-hc
Confidence            4678999987 99999999945 56699 46777787776542    334454321 22221 22233333333322 23


Q ss_pred             CCceEEEeCCC
Q 017868          254 TGIDVSFDCAG  264 (365)
Q Consensus       254 ~~~d~vid~~g  264 (365)
                      +++|++|+++|
T Consensus        83 g~iD~lVnnAG   93 (330)
T PRK06139         83 GRIDVWVNNVG   93 (330)
T ss_pred             CCCCEEEECCC
Confidence            67999999987

>COG1748 LYS9 Saccharopine dehydrogenase and related proteins [Amino acid transport and metabolism]

Probab=96.35  E-value=0.043  Score=50.55  Aligned_cols=97  Identities=15%  Similarity=0.202  Sum_probs=58.6

Q ss_pred             CEEEEEcCCHHHHHHHHHHHHHCCCCeEEEEeCChhHHHHHHHcC--CCEEEeCCCCcccHHHHHHHHHHHhCCCceEEE
Q 017868          183 TNVLIMGAGPIGLVTMLGAPRAFGAPRIVIVDVDDYRLSVAKEIG--ADNIVKVSTNLQDIAEEVEKIQKAMGTGIDVSF  260 (365)
Q Consensus       183 ~~vlI~G~g~~G~~ai~~l~~~~g~~~vi~v~~~~~~~~~~~~~g--~~~~~~~~~~~~~~~~~i~~~~~~~~~~~d~vi  260 (365)
                      .+|||.|+|.+|+.+++.++ +.+...|..++++.++.+.+....  --..+.++-  .+.. .+.++.    .+.|+||
T Consensus         2 ~~ilviGaG~Vg~~va~~la-~~~d~~V~iAdRs~~~~~~i~~~~~~~v~~~~vD~--~d~~-al~~li----~~~d~VI   73 (389)
T COG1748           2 MKILVIGAGGVGSVVAHKLA-QNGDGEVTIADRSKEKCARIAELIGGKVEALQVDA--ADVD-ALVALI----KDFDLVI   73 (389)
T ss_pred             CcEEEECCchhHHHHHHHHH-hCCCceEEEEeCCHHHHHHHHhhccccceeEEecc--cChH-HHHHHH----hcCCEEE
Confidence            47899999999999999445 446457888889988887775553  111222222  1222 222222    3459999


Q ss_pred             eCCCCHHHHHHHHHhcccCCEEEEEcc
Q 017868          261 DCAGLNKTMSTALGATCAGGKVCLVGM  287 (365)
Q Consensus       261 d~~g~~~~~~~~~~~l~~~G~~~~~g~  287 (365)
                      ++....-....+-.++..+=.++..+.
T Consensus        74 n~~p~~~~~~i~ka~i~~gv~yvDts~  100 (389)
T COG1748          74 NAAPPFVDLTILKACIKTGVDYVDTSY  100 (389)
T ss_pred             EeCCchhhHHHHHHHHHhCCCEEEccc
Confidence            998865443333344554545555543

>COG2227 UbiG 2-polyprenyl-3-methyl-5-hydroxy-6-metoxy-1,4-benzoquinol methylase [Coenzyme metabolism]

Probab=96.35  E-value=0.039  Score=46.82  Aligned_cols=95  Identities=21%  Similarity=0.249  Sum_probs=62.0

Q ss_pred             CCCCEEEEEcCCHHHHHHHHHHHHHCCCCeEEEEeCChhHHHHHHHcCCCEE--EeCCCCcccHHHHHHHHHHHhCCCce
Q 017868          180 GPETNVLIMGAGPIGLVTMLGAPRAFGAPRIVIVDVDDYRLSVAKEIGADNI--VKVSTNLQDIAEEVEKIQKAMGTGID  257 (365)
Q Consensus       180 ~~g~~vlI~G~g~~G~~ai~~l~~~~g~~~vi~v~~~~~~~~~~~~~g~~~~--~~~~~~~~~~~~~i~~~~~~~~~~~d  257 (365)
                      -+|.+||=.|+|+ |+++.- +| +.|+ .|.++|.+++..+.++.-....-  ++|..      ..+.++.. .++.||
T Consensus        58 l~g~~vLDvGCGg-G~Lse~-mA-r~Ga-~VtgiD~se~~I~~Ak~ha~e~gv~i~y~~------~~~edl~~-~~~~FD  126 (243)
T COG2227          58 LPGLRVLDVGCGG-GILSEP-LA-RLGA-SVTGIDASEKPIEVAKLHALESGVNIDYRQ------ATVEDLAS-AGGQFD  126 (243)
T ss_pred             CCCCeEEEecCCc-cHhhHH-HH-HCCC-eeEEecCChHHHHHHHHhhhhccccccchh------hhHHHHHh-cCCCcc
Confidence            4788999899864 666666 66 4588 79999999999888775332221  23322      12333322 257999


Q ss_pred             EEEe-----CCCCH-HHHHHHHHhcccCCEEEEE
Q 017868          258 VSFD-----CAGLN-KTMSTALGATCAGGKVCLV  285 (365)
Q Consensus       258 ~vid-----~~g~~-~~~~~~~~~l~~~G~~~~~  285 (365)
                      +|+.     .+..+ ..+..+.++++|+|.+...
T Consensus       127 vV~cmEVlEHv~dp~~~~~~c~~lvkP~G~lf~S  160 (243)
T COG2227         127 VVTCMEVLEHVPDPESFLRACAKLVKPGGILFLS  160 (243)
T ss_pred             EEEEhhHHHccCCHHHHHHHHHHHcCCCcEEEEe
Confidence            9976     33333 3455688899999997764

>PRK08261 fabG 3-ketoacyl-(acyl-carrier-protein) reductase; Provisional

Probab=96.31  E-value=0.11  Score=49.59  Aligned_cols=80  Identities=24%  Similarity=0.311  Sum_probs=47.6

Q ss_pred             CCCEEEEEcC-CHHHHHHHHHHHHHCCCCeEEEEeCCh--hH-HHHHHHcCCCEE-EeCCCCcccHHHHHHHHHHHhCCC
Q 017868          181 PETNVLIMGA-GPIGLVTMLGAPRAFGAPRIVIVDVDD--YR-LSVAKEIGADNI-VKVSTNLQDIAEEVEKIQKAMGTG  255 (365)
Q Consensus       181 ~g~~vlI~G~-g~~G~~ai~~l~~~~g~~~vi~v~~~~--~~-~~~~~~~g~~~~-~~~~~~~~~~~~~i~~~~~~~~~~  255 (365)
                      ++.++||+|+ |++|..+++.+ ...|++ ++.++++.  ++ .+..++++.... .++. +..+....+....+ ..++
T Consensus       209 ~g~~vlItGasggIG~~la~~l-~~~Ga~-vi~~~~~~~~~~l~~~~~~~~~~~~~~Dv~-~~~~~~~~~~~~~~-~~g~  284 (450)
T PRK08261        209 AGKVALVTGAARGIGAAIAEVL-ARDGAH-VVCLDVPAAGEALAAVANRVGGTALALDIT-APDAPARIAEHLAE-RHGG  284 (450)
T ss_pred             CCCEEEEecCCCHHHHHHHHHH-HHCCCE-EEEEeCCccHHHHHHHHHHcCCeEEEEeCC-CHHHHHHHHHHHHH-hCCC
Confidence            5789999987 99999999944 566994 66665532  22 234455665332 2221 22222233333322 2347


Q ss_pred             ceEEEeCCC
Q 017868          256 IDVSFDCAG  264 (365)
Q Consensus       256 ~d~vid~~g  264 (365)
                      +|++|.+.|
T Consensus       285 id~vi~~AG  293 (450)
T PRK08261        285 LDIVVHNAG  293 (450)
T ss_pred             CCEEEECCC
Confidence            999999988

>PRK06057 short chain dehydrogenase; Provisional

Probab=96.25  E-value=0.055  Score=47.26  Aligned_cols=81  Identities=25%  Similarity=0.354  Sum_probs=49.5

Q ss_pred             CCCEEEEEcC-CHHHHHHHHHHHHHCCCCeEEEEeCChhHHH-HHHHcCCCEEEeCCC-CcccHHHHHHHHHHHhCCCce
Q 017868          181 PETNVLIMGA-GPIGLVTMLGAPRAFGAPRIVIVDVDDYRLS-VAKEIGADNIVKVST-NLQDIAEEVEKIQKAMGTGID  257 (365)
Q Consensus       181 ~g~~vlI~G~-g~~G~~ai~~l~~~~g~~~vi~v~~~~~~~~-~~~~~g~~~~~~~~~-~~~~~~~~i~~~~~~~~~~~d  257 (365)
                      +|+++||+|+ |++|.++++.++ ..|+ .++.+++++.+.+ ..++++.. .+..+- +.+++.+.+.++.+. .+++|
T Consensus         6 ~~~~vlItGasggIG~~~a~~l~-~~G~-~v~~~~r~~~~~~~~~~~~~~~-~~~~D~~~~~~~~~~~~~~~~~-~~~id   81 (255)
T PRK06057          6 AGRVAVITGGGSGIGLATARRLA-AEGA-TVVVGDIDPEAGKAAADEVGGL-FVPTDVTDEDAVNALFDTAAET-YGSVD   81 (255)
T ss_pred             CCCEEEEECCCchHHHHHHHHHH-HcCC-EEEEEeCCHHHHHHHHHHcCCc-EEEeeCCCHHHHHHHHHHHHHH-cCCCC
Confidence            4789999987 999999999554 5698 5677777766554 33455542 222222 222333333333221 35789


Q ss_pred             EEEeCCCC
Q 017868          258 VSFDCAGL  265 (365)
Q Consensus       258 ~vid~~g~  265 (365)
                      ++|.++|.
T Consensus        82 ~vi~~ag~   89 (255)
T PRK06057         82 IAFNNAGI   89 (255)
T ss_pred             EEEECCCc
Confidence            99998873

>PF03435 Saccharop_dh: Saccharopine dehydrogenase ; InterPro: IPR005097 This entry represents saccharopine dehydrogenase and homospermidine synthase

Probab=96.24  E-value=0.031  Score=52.27  Aligned_cols=93  Identities=22%  Similarity=0.268  Sum_probs=55.3

Q ss_pred             EEEEcCCHHHHHHHHHHHHHCCCCeEEEEeCChhHHHHHH-H-cCC-CEEEeCCCCcccHHHHHHHHHHHhCCCceEEEe
Q 017868          185 VLIMGAGPIGLVTMLGAPRAFGAPRIVIVDVDDYRLSVAK-E-IGA-DNIVKVSTNLQDIAEEVEKIQKAMGTGIDVSFD  261 (365)
Q Consensus       185 vlI~G~g~~G~~ai~~l~~~~g~~~vi~v~~~~~~~~~~~-~-~g~-~~~~~~~~~~~~~~~~i~~~~~~~~~~~d~vid  261 (365)
                      |+|+|+|.+|..++..|++......+++.+++.++.+.+. + .+. ......+-  .+..+ +.++.    .+.|+||+
T Consensus         1 IlvlG~G~vG~~~~~~L~~~~~~~~v~va~r~~~~~~~~~~~~~~~~~~~~~~d~--~~~~~-l~~~~----~~~dvVin   73 (386)
T PF03435_consen    1 ILVLGAGRVGSAIARLLARRGPFEEVTVADRNPEKAERLAEKLLGDRVEAVQVDV--NDPES-LAELL----RGCDVVIN   73 (386)
T ss_dssp             EEEE--SHHHHHHHHHHHCTTCE-EEEEEESSHHHHHHHHT--TTTTEEEEE--T--TTHHH-HHHHH----TTSSEEEE
T ss_pred             CEEEcCcHHHHHHHHHHhcCCCCCcEEEEECCHHHHHHHHhhccccceeEEEEec--CCHHH-HHHHH----hcCCEEEE
Confidence            6889999999999997766655557888899999876553 3 222 11222222  23222 44443    45699999


Q ss_pred             CCCCHHHHHHHHHhcccCCEEEE
Q 017868          262 CAGLNKTMSTALGATCAGGKVCL  284 (365)
Q Consensus       262 ~~g~~~~~~~~~~~l~~~G~~~~  284 (365)
                      |+|.......+-.++..+-+++.
T Consensus        74 ~~gp~~~~~v~~~~i~~g~~yvD   96 (386)
T PF03435_consen   74 CAGPFFGEPVARACIEAGVHYVD   96 (386)
T ss_dssp             -SSGGGHHHHHHHHHHHT-EEEE
T ss_pred             CCccchhHHHHHHHHHhCCCeec
Confidence            99965344445556666777776

Saccharopine reductase (SR) 1.5.1.10 from EC) catalyses the condensation of l-alpha-aminoadipate-delta-semialdehyde (AASA) with l-glutamate to give an imine, which is reduced by NADPH to give saccharopine []. In some organisms this enzyme is found as a bifunctional polypeptide with lysine ketoglutarate reductase (PF). Saccharopine dehydrogenase can also function as a saccharopine reductase. Homospermidine synthase proteins (2.5.1.44 from EC). Homospermidine synthase (HSS) catalyses the synthesis of the polyamine homospermidine from 2 mol putrescine in an NAD+-dependent reaction [].; GO: 0016491 oxidoreductase activity, 0055114 oxidation-reduction process; PDB: 2AXQ_A 1E5Q_A 1FF9_A 1E5L_A 2PH5_A 3IC5_A 3ABI_A.

>PRK07060 short chain dehydrogenase; Provisional

Probab=96.22  E-value=0.05  Score=47.04  Aligned_cols=78  Identities=26%  Similarity=0.372  Sum_probs=49.5

Q ss_pred             CCCEEEEEcC-CHHHHHHHHHHHHHCCCCeEEEEeCChhHHHHH-HHcCCCEEEeCCCCcccHHHHHHHHHHHhCCCceE
Q 017868          181 PETNVLIMGA-GPIGLVTMLGAPRAFGAPRIVIVDVDDYRLSVA-KEIGADNIVKVSTNLQDIAEEVEKIQKAMGTGIDV  258 (365)
Q Consensus       181 ~g~~vlI~G~-g~~G~~ai~~l~~~~g~~~vi~v~~~~~~~~~~-~~~g~~~~~~~~~~~~~~~~~i~~~~~~~~~~~d~  258 (365)
                      ++.+++|+|+ |.+|..+++ .+...|+ .|+.++++.++.+.+ +..+.. .+..+-.  +. +.+.+..+. ..++|+
T Consensus         8 ~~~~~lItGa~g~iG~~~a~-~l~~~g~-~V~~~~r~~~~~~~~~~~~~~~-~~~~D~~--~~-~~v~~~~~~-~~~~d~   80 (245)
T PRK07060          8 SGKSVLVTGASSGIGRACAV-ALAQRGA-RVVAAARNAAALDRLAGETGCE-PLRLDVG--DD-AAIRAALAA-AGAFDG   80 (245)
T ss_pred             CCCEEEEeCCcchHHHHHHH-HHHHCCC-EEEEEeCCHHHHHHHHHHhCCe-EEEecCC--CH-HHHHHHHHH-hCCCCE
Confidence            4679999987 899999999 5556698 577777777665443 444543 2332222  21 233333322 357999


Q ss_pred             EEeCCCC
Q 017868          259 SFDCAGL  265 (365)
Q Consensus       259 vid~~g~  265 (365)
                      +|.+.|.
T Consensus        81 vi~~ag~   87 (245)
T PRK07060         81 LVNCAGI   87 (245)
T ss_pred             EEECCCC
Confidence            9998873

>PRK08177 short chain dehydrogenase; Provisional

Probab=96.19  E-value=0.043  Score=46.95  Aligned_cols=78  Identities=19%  Similarity=0.244  Sum_probs=47.5

Q ss_pred             CEEEEEcC-CHHHHHHHHHHHHHCCCCeEEEEeCChhHHHHHHHcCCCEEEeCCCCcc-cHHHHHHHHHHHhCCCceEEE
Q 017868          183 TNVLIMGA-GPIGLVTMLGAPRAFGAPRIVIVDVDDYRLSVAKEIGADNIVKVSTNLQ-DIAEEVEKIQKAMGTGIDVSF  260 (365)
Q Consensus       183 ~~vlI~G~-g~~G~~ai~~l~~~~g~~~vi~v~~~~~~~~~~~~~g~~~~~~~~~~~~-~~~~~i~~~~~~~~~~~d~vi  260 (365)
                      .+++|+|+ |++|..++..++ ..|+ .|+++++++++.+.+++++-......+-.+. ++.+.++.+   ...++|++|
T Consensus         2 k~vlItG~sg~iG~~la~~l~-~~G~-~V~~~~r~~~~~~~~~~~~~~~~~~~D~~d~~~~~~~~~~~---~~~~id~vi   76 (225)
T PRK08177          2 RTALIIGASRGLGLGLVDRLL-ERGW-QVTATVRGPQQDTALQALPGVHIEKLDMNDPASLDQLLQRL---QGQRFDLLF   76 (225)
T ss_pred             CEEEEeCCCchHHHHHHHHHH-hCCC-EEEEEeCCCcchHHHHhccccceEEcCCCCHHHHHHHHHHh---hcCCCCEEE
Confidence            46899987 999999999565 5598 6777877776665555543322222222222 222222222   235799999


Q ss_pred             eCCCC
Q 017868          261 DCAGL  265 (365)
Q Consensus       261 d~~g~  265 (365)
                      .++|.
T Consensus        77 ~~ag~   81 (225)
T PRK08177         77 VNAGI   81 (225)
T ss_pred             EcCcc
Confidence            88763

>PF13460 NAD_binding_10: NADH(P)-binding ; PDB: 3OH8_A 3E8X_A 3GPI_A 3QVO_A 2Q46_B 1YBM_B 1XQ6_B 2Q4B_B 3EW7_A 3IUS_B

Probab=96.18  E-value=0.09  Score=43.23  Aligned_cols=91  Identities=18%  Similarity=0.225  Sum_probs=56.7

Q ss_pred             EEEEcC-CHHHHHHHHHHHHHCCCCeEEEEeCChhHHHHHHHcCCCEEEeCCCCcccHHHHHHHHHHHhCCCceEEEeCC
Q 017868          185 VLIMGA-GPIGLVTMLGAPRAFGAPRIVIVDVDDYRLSVAKEIGADNIVKVSTNLQDIAEEVEKIQKAMGTGIDVSFDCA  263 (365)
Q Consensus       185 vlI~G~-g~~G~~ai~~l~~~~g~~~vi~v~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~i~~~~~~~~~~~d~vid~~  263 (365)
                      |+|.|+ |.+|..+++ .+...|. .|.++.+++++.+.  ..++. ++..+-  .+. +.+++..    .++|.||.++
T Consensus         1 I~V~GatG~vG~~l~~-~L~~~~~-~V~~~~R~~~~~~~--~~~~~-~~~~d~--~d~-~~~~~al----~~~d~vi~~~   68 (183)
T PF13460_consen    1 ILVFGATGFVGRALAK-QLLRRGH-EVTALVRSPSKAED--SPGVE-IIQGDL--FDP-DSVKAAL----KGADAVIHAA   68 (183)
T ss_dssp             EEEETTTSHHHHHHHH-HHHHTTS-EEEEEESSGGGHHH--CTTEE-EEESCT--TCH-HHHHHHH----TTSSEEEECC
T ss_pred             eEEECCCChHHHHHHH-HHHHCCC-EEEEEecCchhccc--ccccc-cceeee--hhh-hhhhhhh----hhcchhhhhh
Confidence            789998 999999999 5566687 67777788887666  33333 233222  333 2333322    4899999999


Q ss_pred             CC----HHHHHHHHHhcccC--CEEEEEcc
Q 017868          264 GL----NKTMSTALGATCAG--GKVCLVGM  287 (365)
Q Consensus       264 g~----~~~~~~~~~~l~~~--G~~~~~g~  287 (365)
                      |.    .......++.+...  .+++.++.
T Consensus        69 ~~~~~~~~~~~~~~~a~~~~~~~~~v~~s~   98 (183)
T PF13460_consen   69 GPPPKDVDAAKNIIEAAKKAGVKRVVYLSS   98 (183)
T ss_dssp             HSTTTHHHHHHHHHHHHHHTTSSEEEEEEE
T ss_pred             hhhcccccccccccccccccccccceeeec
Confidence            83    22344555555443  36666653

...

>TIGR02356 adenyl_thiF thiazole biosynthesis adenylyltransferase ThiF, E

Probab=96.16  E-value=0.11  Score=43.81  Aligned_cols=35  Identities=43%  Similarity=0.552  Sum_probs=29.4

Q ss_pred             CCCEEEEEcCCHHHHHHHHHHHHHCCCCeEEEEeCC
Q 017868          181 PETNVLIMGAGPIGLVTMLGAPRAFGAPRIVIVDVD  216 (365)
Q Consensus       181 ~g~~vlI~G~g~~G~~ai~~l~~~~g~~~vi~v~~~  216 (365)
                      ...+|+|.|+|++|..+++ .+...|...+..+|.+
T Consensus        20 ~~~~VlviG~GglGs~ia~-~La~~Gv~~i~lvD~d   54 (202)
T TIGR02356        20 LNSHVLIIGAGGLGSPAAL-YLAGAGVGTIVIVDDD   54 (202)
T ss_pred             cCCCEEEECCCHHHHHHHH-HHHHcCCCeEEEecCC
Confidence            4468999999999999999 5567799888888766

coli subfamily. Members of the HesA/MoeB/ThiF family of proteins (pfam00899) include a number of members encoded in the midst of thiamine biosynthetic operons. This mix of known and putative ThiF proteins shows a deep split in phylogenetic trees, with the Escherichia. coli ThiF and the E. coli MoeB proteins seemingly more closely related than E. coli ThiF and Campylobacter (for example) ThiF. This model represents the more widely distributed clade of ThiF proteins such found in E. coli.

>PF00106 adh_short: short chain dehydrogenase alcohol dehydrogenase superfamily signature glucose/ribitol dehydrogenase family signature; InterPro: IPR002198 The short-chain dehydrogenases/reductases family (SDR) [] is a very large family of enzymes, most of which are known to be NAD- or NADP-dependent oxidoreductases

Probab=96.12  E-value=0.034  Score=44.96  Aligned_cols=81  Identities=23%  Similarity=0.330  Sum_probs=50.0

Q ss_pred             CEEEEEcC-CHHHHHHHHHHHHHCCCCeEEEEeCC--hhHH-HHH---HHcCCCE-EEeCC-CCcccHHHHHHHHHHHhC
Q 017868          183 TNVLIMGA-GPIGLVTMLGAPRAFGAPRIVIVDVD--DYRL-SVA---KEIGADN-IVKVS-TNLQDIAEEVEKIQKAMG  253 (365)
Q Consensus       183 ~~vlI~G~-g~~G~~ai~~l~~~~g~~~vi~v~~~--~~~~-~~~---~~~g~~~-~~~~~-~~~~~~~~~i~~~~~~~~  253 (365)
                      +++||+|+ +++|..+++.+++. |..+++.+.++  .++. ++.   +..+... .+..+ .+.++....+.++.+ ..
T Consensus         1 k~~lItGa~~giG~~~a~~l~~~-g~~~v~~~~r~~~~~~~~~l~~~l~~~~~~~~~~~~D~~~~~~~~~~~~~~~~-~~   78 (167)
T PF00106_consen    1 KTVLITGASSGIGRALARALARR-GARVVILTSRSEDSEGAQELIQELKAPGAKITFIECDLSDPESIRALIEEVIK-RF   78 (167)
T ss_dssp             EEEEEETTTSHHHHHHHHHHHHT-TTEEEEEEESSCHHHHHHHHHHHHHHTTSEEEEEESETTSHHHHHHHHHHHHH-HH
T ss_pred             CEEEEECCCCHHHHHHHHHHHhc-CceEEEEeeeccccccccccccccccccccccccccccccccccccccccccc-cc
Confidence            36899987 99999999967666 77788888887  3333 232   3344211 22222 222344444444432 25


Q ss_pred             CCceEEEeCCCC
Q 017868          254 TGIDVSFDCAGL  265 (365)
Q Consensus       254 ~~~d~vid~~g~  265 (365)
                      ..+|++|.+.|.
T Consensus        79 ~~ld~li~~ag~   90 (167)
T PF00106_consen   79 GPLDILINNAGI   90 (167)
T ss_dssp             SSESEEEEECSC
T ss_pred             cccccccccccc
Confidence            689999998883

As the first member of this family to be characterised was Drosophila alcohol dehydrogenase, this family used to be called [, , ] 'insect-type', or 'short-chain' alcohol dehydrogenases. Most member of this family are proteins of about 250 to 300 amino acid residues. Most dehydrogenases possess at least 2 domains [], the first binding the coenzyme, often NAD, and the second binding the substrate. This latter domain determines the substrate specificity and contains amino acids involved in catalysis. Little sequence similarity has been found in the coenzyme binding domain although there is a large degree of structural similarity, and it has therefore been suggested that the structure of dehydrogenases has arisen through gene fusion of a common ancestral coenzyme nucleotide sequence with various substrate specific domains [].; GO: 0016491 oxidoreductase activity, 0008152 metabolic process; PDB: 3QWI_D 3QWF_G 3IS3_A 3QWH_C 3ITD_A 3L77_A 1HDC_C 2HSD_C 3KVO_A 3KZV_A ....

>PRK13940 glutamyl-tRNA reductase; Provisional

Probab=96.07  E-value=0.028  Score=52.75  Aligned_cols=74  Identities=16%  Similarity=0.236  Sum_probs=52.2

Q ss_pred             CCCCEEEEEcCCHHHHHHHHHHHHHCCCCeEEEEeCChhHHH-HHHHcCCCEEEeCCCCcccHHHHHHHHHHHhCCCceE
Q 017868          180 GPETNVLIMGAGPIGLVTMLGAPRAFGAPRIVIVDVDDYRLS-VAKEIGADNIVKVSTNLQDIAEEVEKIQKAMGTGIDV  258 (365)
Q Consensus       180 ~~g~~vlI~G~g~~G~~ai~~l~~~~g~~~vi~v~~~~~~~~-~~~~~g~~~~~~~~~~~~~~~~~i~~~~~~~~~~~d~  258 (365)
                      -.+.+|||.|+|.+|.+++. .+...|+..+.++.++.++.+ ++++++....+.       +. .+.+.    -..+|+
T Consensus       179 l~~kkvlviGaG~~a~~va~-~L~~~g~~~I~V~nRt~~ra~~La~~~~~~~~~~-------~~-~l~~~----l~~aDi  245 (414)
T PRK13940        179 ISSKNVLIIGAGQTGELLFR-HVTALAPKQIMLANRTIEKAQKITSAFRNASAHY-------LS-ELPQL----IKKADI  245 (414)
T ss_pred             ccCCEEEEEcCcHHHHHHHH-HHHHcCCCEEEEECCCHHHHHHHHHHhcCCeEec-------HH-HHHHH----hccCCE
Confidence            46789999999999999999 556779888888888877754 556665222222       11 12221    146999


Q ss_pred             EEeCCCCH
Q 017868          259 SFDCAGLN  266 (365)
Q Consensus       259 vid~~g~~  266 (365)
                      ||.|++.+
T Consensus       246 VI~aT~a~  253 (414)
T PRK13940        246 IIAAVNVL  253 (414)
T ss_pred             EEECcCCC
Confidence            99999975

>PRK06949 short chain dehydrogenase; Provisional

Probab=96.07  E-value=0.079  Score=46.23  Aligned_cols=82  Identities=23%  Similarity=0.296  Sum_probs=49.8

Q ss_pred             CCCCEEEEEcC-CHHHHHHHHHHHHHCCCCeEEEEeCChhHHHHH-HHc---CC-CEEEeCCC-CcccHHHHHHHHHHHh
Q 017868          180 GPETNVLIMGA-GPIGLVTMLGAPRAFGAPRIVIVDVDDYRLSVA-KEI---GA-DNIVKVST-NLQDIAEEVEKIQKAM  252 (365)
Q Consensus       180 ~~g~~vlI~G~-g~~G~~ai~~l~~~~g~~~vi~v~~~~~~~~~~-~~~---g~-~~~~~~~~-~~~~~~~~i~~~~~~~  252 (365)
                      ..+.++||+|+ |.+|.+++..+ ...|+ .|+.+.+++++.+.+ ..+   +. ...+..+- +.+++.+.+++..+ .
T Consensus         7 ~~~k~ilItGasg~IG~~~a~~l-~~~G~-~Vi~~~r~~~~~~~~~~~l~~~~~~~~~~~~D~~~~~~~~~~~~~~~~-~   83 (258)
T PRK06949          7 LEGKVALVTGASSGLGARFAQVL-AQAGA-KVVLASRRVERLKELRAEIEAEGGAAHVVSLDVTDYQSIKAAVAHAET-E   83 (258)
T ss_pred             CCCCEEEEECCCcHHHHHHHHHH-HHCCC-EEEEEeCCHHHHHHHHHHHHhcCCcEEEEEecCCCHHHHHHHHHHHHH-h
Confidence            35789999987 99999999945 45698 577777777765433 222   21 12222222 22333333333322 2


Q ss_pred             CCCceEEEeCCC
Q 017868          253 GTGIDVSFDCAG  264 (365)
Q Consensus       253 ~~~~d~vid~~g  264 (365)
                      .+++|++|.+.|
T Consensus        84 ~~~~d~li~~ag   95 (258)
T PRK06949         84 AGTIDILVNNSG   95 (258)
T ss_pred             cCCCCEEEECCC
Confidence            357999999888

>PLN03209 translocon at the inner envelope of chloroplast subunit 62; Provisional

Probab=96.03  E-value=0.12  Score=50.19  Aligned_cols=45  Identities=20%  Similarity=0.224  Sum_probs=34.3

Q ss_pred             HhcCCCCCCEEEEEcC-CHHHHHHHHHHHHHCCCCeEEEEeCChhHHH
Q 017868          175 RRANIGPETNVLIMGA-GPIGLVTMLGAPRAFGAPRIVIVDVDDYRLS  221 (365)
Q Consensus       175 ~~~~~~~g~~vlI~G~-g~~G~~ai~~l~~~~g~~~vi~v~~~~~~~~  221 (365)
                      ...+.+.|.++||+|+ |.+|..+++.| ...|+ .|+++.++.++.+
T Consensus        73 ~~~~~~~gKvVLVTGATGgIG~aLAr~L-Lk~G~-~Vval~Rn~ekl~  118 (576)
T PLN03209         73 KELDTKDEDLAFVAGATGKVGSRTVREL-LKLGF-RVRAGVRSAQRAE  118 (576)
T ss_pred             cccccCCCCEEEEECCCCHHHHHHHHHH-HHCCC-eEEEEeCCHHHHH
Confidence            3456788999999987 99999999944 45698 4666667776654

>PRK07402 precorrin-6B methylase; Provisional

Probab=96.00  E-value=0.2  Score=41.91  Aligned_cols=105  Identities=13%  Similarity=0.255  Sum_probs=60.8

Q ss_pred             HHhcCCCCCCEEEEEcCCHHHHHHHHHHHHHCCCCeEEEEeCChhHHHHHH----HcCCCEEEeCCCCcccHHHHHHHHH
Q 017868          174 CRRANIGPETNVLIMGAGPIGLVTMLGAPRAFGAPRIVIVDVDDYRLSVAK----EIGADNIVKVSTNLQDIAEEVEKIQ  249 (365)
Q Consensus       174 ~~~~~~~~g~~vlI~G~g~~G~~ai~~l~~~~g~~~vi~v~~~~~~~~~~~----~~g~~~~~~~~~~~~~~~~~i~~~~  249 (365)
                      +....++++++||=.|+|. |..++. +++......+++++.+++..+.++    +++...+.....   +..+.+..+ 
T Consensus        33 ~~~l~~~~~~~VLDiG~G~-G~~~~~-la~~~~~~~V~~vD~s~~~~~~a~~n~~~~~~~~v~~~~~---d~~~~~~~~-  106 (196)
T PRK07402         33 ISQLRLEPDSVLWDIGAGT-GTIPVE-AGLLCPKGRVIAIERDEEVVNLIRRNCDRFGVKNVEVIEG---SAPECLAQL-  106 (196)
T ss_pred             HHhcCCCCCCEEEEeCCCC-CHHHHH-HHHHCCCCEEEEEeCCHHHHHHHHHHHHHhCCCCeEEEEC---chHHHHhhC-
Confidence            3556778889988887643 445555 444433347999999988766553    456543322222   222212111 


Q ss_pred             HHhCCCceEEEeCCCC-HHHHHHHHHhcccCCEEEEEc
Q 017868          250 KAMGTGIDVSFDCAGL-NKTMSTALGATCAGGKVCLVG  286 (365)
Q Consensus       250 ~~~~~~~d~vid~~g~-~~~~~~~~~~l~~~G~~~~~g  286 (365)
                        ....-.++++.... ...+..+.+.|+++|.++...
T Consensus       107 --~~~~d~v~~~~~~~~~~~l~~~~~~LkpgG~li~~~  142 (196)
T PRK07402        107 --APAPDRVCIEGGRPIKEILQAVWQYLKPGGRLVATA  142 (196)
T ss_pred             --CCCCCEEEEECCcCHHHHHHHHHHhcCCCeEEEEEe
Confidence              11222344543222 356778889999999988774

>PRK06463 fabG 3-ketoacyl-(acyl-carrier-protein) reductase; Provisional

Probab=95.98  E-value=0.077  Score=46.33  Aligned_cols=82  Identities=22%  Similarity=0.233  Sum_probs=47.6

Q ss_pred             CCCEEEEEcC-CHHHHHHHHHHHHHCCCCeEEEEeCChhHHHHHHHcCCCEEEeCCC-CcccHHHHHHHHHHHhCCCceE
Q 017868          181 PETNVLIMGA-GPIGLVTMLGAPRAFGAPRIVIVDVDDYRLSVAKEIGADNIVKVST-NLQDIAEEVEKIQKAMGTGIDV  258 (365)
Q Consensus       181 ~g~~vlI~G~-g~~G~~ai~~l~~~~g~~~vi~v~~~~~~~~~~~~~g~~~~~~~~~-~~~~~~~~i~~~~~~~~~~~d~  258 (365)
                      .+.++||+|+ +++|.++++.++ ..|+++++...++++..+.++..+... +..+- +.++..+.++++.+. .+++|+
T Consensus         6 ~~k~~lItGas~gIG~~~a~~l~-~~G~~v~~~~~~~~~~~~~l~~~~~~~-~~~Dl~~~~~~~~~~~~~~~~-~~~id~   82 (255)
T PRK06463          6 KGKVALITGGTRGIGRAIAEAFL-REGAKVAVLYNSAENEAKELREKGVFT-IKCDVGNRDQVKKSKEVVEKE-FGRVDV   82 (255)
T ss_pred             CCCEEEEeCCCChHHHHHHHHHH-HCCCEEEEEeCCcHHHHHHHHhCCCeE-EEecCCCHHHHHHHHHHHHHH-cCCCCE
Confidence            4678999987 999999999554 569854444344444444444434322 22222 223333444443332 357999


Q ss_pred             EEeCCCC
Q 017868          259 SFDCAGL  265 (365)
Q Consensus       259 vid~~g~  265 (365)
                      +|.+.|.
T Consensus        83 li~~ag~   89 (255)
T PRK06463         83 LVNNAGI   89 (255)
T ss_pred             EEECCCc
Confidence            9998873

>TIGR01470 cysG_Nterm siroheme synthase, N-terminal domain

Probab=95.98  E-value=0.26  Score=41.51  Aligned_cols=91  Identities=16%  Similarity=0.133  Sum_probs=54.1

Q ss_pred             CCCEEEEEcCCHHHHHHHHHHHHHCCCCeEEEEeCCh-hHHHHHHHcCCCEEEeCCCCcccHHHHHHHHHHHhCCCceEE
Q 017868          181 PETNVLIMGAGPIGLVTMLGAPRAFGAPRIVIVDVDD-YRLSVAKEIGADNIVKVSTNLQDIAEEVEKIQKAMGTGIDVS  259 (365)
Q Consensus       181 ~g~~vlI~G~g~~G~~ai~~l~~~~g~~~vi~v~~~~-~~~~~~~~~g~~~~~~~~~~~~~~~~~i~~~~~~~~~~~d~v  259 (365)
                      .|.+|||.|+|.+|..-+. .+...|+. |.+++... +..+.+.+.|--..+   ..  ++...  .     -.++++|
T Consensus         8 ~gk~vlVvGgG~va~rk~~-~Ll~~ga~-VtVvsp~~~~~l~~l~~~~~i~~~---~~--~~~~~--d-----l~~~~lV   73 (205)
T TIGR01470         8 EGRAVLVVGGGDVALRKAR-LLLKAGAQ-LRVIAEELESELTLLAEQGGITWL---AR--CFDAD--I-----LEGAFLV   73 (205)
T ss_pred             CCCeEEEECcCHHHHHHHH-HHHHCCCE-EEEEcCCCCHHHHHHHHcCCEEEE---eC--CCCHH--H-----hCCcEEE
Confidence            4679999999999999999 55567984 55654432 222222232311111   11  11111  1     2579999


Q ss_pred             EeCCCCHHHHHHHHHhcccCCEEEEE
Q 017868          260 FDCAGLNKTMSTALGATCAGGKVCLV  285 (365)
Q Consensus       260 id~~g~~~~~~~~~~~l~~~G~~~~~  285 (365)
                      |-+++.+..-..........|..+..
T Consensus        74 i~at~d~~ln~~i~~~a~~~~ilvn~   99 (205)
T TIGR01470        74 IAATDDEELNRRVAHAARARGVPVNV   99 (205)
T ss_pred             EECCCCHHHHHHHHHHHHHcCCEEEE
Confidence            99999875544555555566766654

This model represents a subfamily of CysG N-terminal region-related sequences. All sequences in the seed alignment for this model are N-terminal regions of known or predicted siroheme synthases. The C-terminal region of each is uroporphyrin-III C-methyltransferase (EC 2.1.1.107), which catalyzes the first step committed to the biosynthesis of either siroheme or cobalamin (vitamin B12) rather than protoheme (heme). The region represented by this model completes the process of oxidation and iron insertion to yield siroheme. Siroheme is a cofactor for nitrite and sulfite reductases, so siroheme synthase is CysG of cysteine biosynthesis in some organisms.

>PRK07825 short chain dehydrogenase; Provisional

Probab=95.97  E-value=0.073  Score=47.01  Aligned_cols=80  Identities=29%  Similarity=0.304  Sum_probs=50.0

Q ss_pred             CCEEEEEcC-CHHHHHHHHHHHHHCCCCeEEEEeCChhHHHH-HHHcCCCEEEeCCC-CcccHHHHHHHHHHHhCCCceE
Q 017868          182 ETNVLIMGA-GPIGLVTMLGAPRAFGAPRIVIVDVDDYRLSV-AKEIGADNIVKVST-NLQDIAEEVEKIQKAMGTGIDV  258 (365)
Q Consensus       182 g~~vlI~G~-g~~G~~ai~~l~~~~g~~~vi~v~~~~~~~~~-~~~~g~~~~~~~~~-~~~~~~~~i~~~~~~~~~~~d~  258 (365)
                      +.++||+|+ |++|..+++.++ ..|+ .++.+++++++.+. .+.++....+..+- +.+++...+..+.+. .+++|+
T Consensus         5 ~~~ilVtGasggiG~~la~~l~-~~G~-~v~~~~r~~~~~~~~~~~~~~~~~~~~D~~~~~~~~~~~~~~~~~-~~~id~   81 (273)
T PRK07825          5 GKVVAITGGARGIGLATARALA-ALGA-RVAIGDLDEALAKETAAELGLVVGGPLDVTDPASFAAFLDAVEAD-LGPIDV   81 (273)
T ss_pred             CCEEEEeCCCchHHHHHHHHHH-HCCC-EEEEEECCHHHHHHHHHHhccceEEEccCCCHHHHHHHHHHHHHH-cCCCCE
Confidence            578999987 999999999555 5698 46677777776543 34454222222222 223443444444332 357999


Q ss_pred             EEeCCC
Q 017868          259 SFDCAG  264 (365)
Q Consensus       259 vid~~g  264 (365)
                      +|.+.|
T Consensus        82 li~~ag   87 (273)
T PRK07825         82 LVNNAG   87 (273)
T ss_pred             EEECCC
Confidence            999887

>PRK07814 short chain dehydrogenase; Provisional

Probab=95.95  E-value=0.096  Score=45.99  Aligned_cols=81  Identities=19%  Similarity=0.271  Sum_probs=48.2

Q ss_pred             CCCEEEEEcC-CHHHHHHHHHHHHHCCCCeEEEEeCChhHHHHH-HHc---CCC-EEEeCCCCc-ccHHHHHHHHHHHhC
Q 017868          181 PETNVLIMGA-GPIGLVTMLGAPRAFGAPRIVIVDVDDYRLSVA-KEI---GAD-NIVKVSTNL-QDIAEEVEKIQKAMG  253 (365)
Q Consensus       181 ~g~~vlI~G~-g~~G~~ai~~l~~~~g~~~vi~v~~~~~~~~~~-~~~---g~~-~~~~~~~~~-~~~~~~i~~~~~~~~  253 (365)
                      ++.++||+|+ |++|.++++.+ ...|+ .|+.+++++++.+.+ +.+   +.. ..+..+-.+ +++...+.+..+. -
T Consensus         9 ~~~~vlItGasggIG~~~a~~l-~~~G~-~Vi~~~r~~~~~~~~~~~l~~~~~~~~~~~~D~~~~~~~~~~~~~~~~~-~   85 (263)
T PRK07814          9 DDQVAVVTGAGRGLGAAIALAF-AEAGA-DVLIAARTESQLDEVAEQIRAAGRRAHVVAADLAHPEATAGLAGQAVEA-F   85 (263)
T ss_pred             CCCEEEEECCCChHHHHHHHHH-HHCCC-EEEEEeCCHHHHHHHHHHHHhcCCcEEEEEccCCCHHHHHHHHHHHHHH-c
Confidence            4689999987 89999999955 45699 677777777654432 222   322 122222222 2222233333222 2


Q ss_pred             CCceEEEeCCC
Q 017868          254 TGIDVSFDCAG  264 (365)
Q Consensus       254 ~~~d~vid~~g  264 (365)
                      +++|++|.++|
T Consensus        86 ~~id~vi~~Ag   96 (263)
T PRK07814         86 GRLDIVVNNVG   96 (263)
T ss_pred             CCCCEEEECCC
Confidence            57999999887

>PF02826 2-Hacid_dh_C: D-isomer specific 2-hydroxyacid dehydrogenase, NAD binding domain; InterPro: IPR006140 A number of NAD-dependent 2-hydroxyacid dehydrogenases which seem to be specific for the D-isomer of their substrate have been shown to be functionally and structurally related

Probab=95.94  E-value=0.055  Score=44.53  Aligned_cols=89  Identities=22%  Similarity=0.200  Sum_probs=58.9

Q ss_pred             CCCCEEEEEcCCHHHHHHHHHHHHHCCCCeEEEEeCChhHHHHHHHcCCCEEEeCCCCcccHHHHHHHHHHHhCCCceEE
Q 017868          180 GPETNVLIMGAGPIGLVTMLGAPRAFGAPRIVIVDVDDYRLSVAKEIGADNIVKVSTNLQDIAEEVEKIQKAMGTGIDVS  259 (365)
Q Consensus       180 ~~g~~vlI~G~g~~G~~ai~~l~~~~g~~~vi~v~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~i~~~~~~~~~~~d~v  259 (365)
                      -.|.+|.|+|.|.+|+.+++ .++.+|+ +|++.+++..........+...        .++.+.+        ...|+|
T Consensus        34 l~g~tvgIiG~G~IG~~vA~-~l~~fG~-~V~~~d~~~~~~~~~~~~~~~~--------~~l~ell--------~~aDiv   95 (178)
T PF02826_consen   34 LRGKTVGIIGYGRIGRAVAR-RLKAFGM-RVIGYDRSPKPEEGADEFGVEY--------VSLDELL--------AQADIV   95 (178)
T ss_dssp             STTSEEEEESTSHHHHHHHH-HHHHTT--EEEEEESSCHHHHHHHHTTEEE--------SSHHHHH--------HH-SEE
T ss_pred             cCCCEEEEEEEcCCcCeEee-eeecCCc-eeEEecccCChhhhccccccee--------eehhhhc--------chhhhh
Confidence            36899999999999999999 8899999 7888888877666455555421        1332222        247888


Q ss_pred             EeCCCCHH-----HHHHHHHhcccCCEEEEEc
Q 017868          260 FDCAGLNK-----TMSTALGATCAGGKVCLVG  286 (365)
Q Consensus       260 id~~g~~~-----~~~~~~~~l~~~G~~~~~g  286 (365)
                      +.+.....     .-...+..++++..++.++
T Consensus        96 ~~~~plt~~T~~li~~~~l~~mk~ga~lvN~a  127 (178)
T PF02826_consen   96 SLHLPLTPETRGLINAEFLAKMKPGAVLVNVA  127 (178)
T ss_dssp             EE-SSSSTTTTTSBSHHHHHTSTTTEEEEESS
T ss_pred             hhhhccccccceeeeeeeeeccccceEEEecc
Confidence            87665211     1125677788777777664

All contain a glycine-rich region located in the central section of these enzymes, this region corresponds to the NAD-binding domain. The catalytic domain is described in IPR006139 from INTERPRO ; GO: 0016616 oxidoreductase activity, acting on the CH-OH group of donors, NAD or NADP as acceptor, 0048037 cofactor binding, 0055114 oxidation-reduction process; PDB: 3JTM_A 3NAQ_B 3N7U_J 3KB6_B 3GG9_A 1QP8_B 2CUK_C 2W2L_D 2W2K_A 1WWK_A ....

>TIGR01809 Shik-DH-AROM shikimate-5-dehydrogenase, fungal AROM-type

Probab=95.94  E-value=0.034  Score=49.48  Aligned_cols=76  Identities=16%  Similarity=0.171  Sum_probs=50.3

Q ss_pred             CCCEEEEEcCCHHHHHHHHHHHHHCCCCeEEEEeCChhHHH-HHHHcCCCE-EEeCCCCcccHHHHHHHHHHHhCCCceE
Q 017868          181 PETNVLIMGAGPIGLVTMLGAPRAFGAPRIVIVDVDDYRLS-VAKEIGADN-IVKVSTNLQDIAEEVEKIQKAMGTGIDV  258 (365)
Q Consensus       181 ~g~~vlI~G~g~~G~~ai~~l~~~~g~~~vi~v~~~~~~~~-~~~~~g~~~-~~~~~~~~~~~~~~i~~~~~~~~~~~d~  258 (365)
                      ++.++||.|+|+.+.+++. .+...|++.+.++.++.+|.+ ++++++... +..+.    .+ +.+...    -..+|+
T Consensus       124 ~~k~vlvlGaGGaarai~~-aL~~~G~~~i~I~nRt~~ka~~La~~~~~~~~~~~~~----~~-~~~~~~----~~~~Di  193 (282)
T TIGR01809       124 AGFRGLVIGAGGTSRAAVY-ALASLGVTDITVINRNPDKLSRLVDLGVQVGVITRLE----GD-SGGLAI----EKAAEV  193 (282)
T ss_pred             CCceEEEEcCcHHHHHHHH-HHHHcCCCeEEEEeCCHHHHHHHHHHhhhcCcceecc----ch-hhhhhc----ccCCCE
Confidence            5789999999999999999 666789988999999888765 445554211 11110    00 111111    246899


Q ss_pred             EEeCCCCH
Q 017868          259 SFDCAGLN  266 (365)
Q Consensus       259 vid~~g~~  266 (365)
                      ||+|+...
T Consensus       194 VInaTp~g  201 (282)
T TIGR01809       194 LVSTVPAD  201 (282)
T ss_pred             EEECCCCC
Confidence            99998753

This model represents a clade of shikimate-5-dehydrogenases found in Corynebacterium, Mycobacteria and fungi. The fungal sequences are pentafunctional proteins known as AroM which contain the central five seven steps in the chorismate biosynthesis pathway. The Corynebacterium and Mycobacterial sequences represent the sole shikimate-5-dehydrogenases in species which otherwise have every enzyme of the chorismate biosynthesis pathway.

>PRK05866 short chain dehydrogenase; Provisional

Probab=95.92  E-value=0.11  Score=46.45  Aligned_cols=82  Identities=24%  Similarity=0.333  Sum_probs=49.1

Q ss_pred             CCCEEEEEcC-CHHHHHHHHHHHHHCCCCeEEEEeCChhHHHHH-H---HcCCCE-EEeCCC-CcccHHHHHHHHHHHhC
Q 017868          181 PETNVLIMGA-GPIGLVTMLGAPRAFGAPRIVIVDVDDYRLSVA-K---EIGADN-IVKVST-NLQDIAEEVEKIQKAMG  253 (365)
Q Consensus       181 ~g~~vlI~G~-g~~G~~ai~~l~~~~g~~~vi~v~~~~~~~~~~-~---~~g~~~-~~~~~~-~~~~~~~~i~~~~~~~~  253 (365)
                      .+.++||+|+ |++|.++++.++ ..|+ .|+.++++.++.+.+ +   ..+... .+..+- +.+++.+.++.+.+. -
T Consensus        39 ~~k~vlItGasggIG~~la~~La-~~G~-~Vi~~~R~~~~l~~~~~~l~~~~~~~~~~~~Dl~d~~~v~~~~~~~~~~-~  115 (293)
T PRK05866         39 TGKRILLTGASSGIGEAAAEQFA-RRGA-TVVAVARREDLLDAVADRITRAGGDAMAVPCDLSDLDAVDALVADVEKR-I  115 (293)
T ss_pred             CCCEEEEeCCCcHHHHHHHHHHH-HCCC-EEEEEECCHHHHHHHHHHHHhcCCcEEEEEccCCCHHHHHHHHHHHHHH-c
Confidence            4578999987 999999999555 5588 577777877665432 2   223321 222222 222333333333322 3


Q ss_pred             CCceEEEeCCCC
Q 017868          254 TGIDVSFDCAGL  265 (365)
Q Consensus       254 ~~~d~vid~~g~  265 (365)
                      +++|++|.++|.
T Consensus       116 g~id~li~~AG~  127 (293)
T PRK05866        116 GGVDILINNAGR  127 (293)
T ss_pred             CCCCEEEECCCC
Confidence            579999999873

>KOG1201 consensus Hydroxysteroid 17-beta dehydrogenase 11 [Secondary metabolites biosynthesis, transport and catabolism]

Probab=95.92  E-value=0.11  Score=45.61  Aligned_cols=81  Identities=22%  Similarity=0.390  Sum_probs=51.8

Q ss_pred             CCCCEEEEEcC-CHHHHHHHHHHHHHCCCCeEEEEeCChh----HHHHHHHcCCC--EEEeCCCCcccHHHHHHHHHHHh
Q 017868          180 GPETNVLIMGA-GPIGLVTMLGAPRAFGAPRIVIVDVDDY----RLSVAKEIGAD--NIVKVSTNLQDIAEEVEKIQKAM  252 (365)
Q Consensus       180 ~~g~~vlI~G~-g~~G~~ai~~l~~~~g~~~vi~v~~~~~----~~~~~~~~g~~--~~~~~~~~~~~~~~~i~~~~~~~  252 (365)
                      -+|+.|||+|+ +++|.+.++-+|++ |+ +++..|.+.+    ..+..++.|-.  ...+. ++.++.....++..+. 
T Consensus        36 v~g~~vLITGgg~GlGr~ialefa~r-g~-~~vl~Din~~~~~etv~~~~~~g~~~~y~cdi-s~~eei~~~a~~Vk~e-  111 (300)
T KOG1201|consen   36 VSGEIVLITGGGSGLGRLIALEFAKR-GA-KLVLWDINKQGNEETVKEIRKIGEAKAYTCDI-SDREEIYRLAKKVKKE-  111 (300)
T ss_pred             ccCCEEEEeCCCchHHHHHHHHHHHh-CC-eEEEEeccccchHHHHHHHHhcCceeEEEecC-CCHHHHHHHHHHHHHh-
Confidence            47899999987 89999888857755 88 5666666653    33444444422  22333 2344555544444443 


Q ss_pred             CCCceEEEeCCC
Q 017868          253 GTGIDVSFDCAG  264 (365)
Q Consensus       253 ~~~~d~vid~~g  264 (365)
                      -+.+|++++.+|
T Consensus       112 ~G~V~ILVNNAG  123 (300)
T KOG1201|consen  112 VGDVDILVNNAG  123 (300)
T ss_pred             cCCceEEEeccc
Confidence            459999999888

>PRK07340 ornithine cyclodeaminase; Validated

Probab=95.91  E-value=0.11  Score=46.64  Aligned_cols=103  Identities=15%  Similarity=0.125  Sum_probs=67.5

Q ss_pred             HHhcCCCCCCEEEEEcCCHHHHHHHHHHHHHCCCCeEEEEeCChhHHH-HHHHcCCCE-EEeCCCCcccHHHHHHHHHHH
Q 017868          174 CRRANIGPETNVLIMGAGPIGLVTMLGAPRAFGAPRIVIVDVDDYRLS-VAKEIGADN-IVKVSTNLQDIAEEVEKIQKA  251 (365)
Q Consensus       174 ~~~~~~~~g~~vlI~G~g~~G~~ai~~l~~~~g~~~vi~v~~~~~~~~-~~~~~g~~~-~~~~~~~~~~~~~~i~~~~~~  251 (365)
                      .+...-....+++|.|+|..|.+.+..++...+.+.+.+.+++.++.+ +++++.... .+..    .+..+.+      
T Consensus       117 ~~~La~~~~~~v~IiGaG~qa~~~~~al~~~~~~~~v~v~~r~~~~a~~~a~~~~~~~~~~~~----~~~~~av------  186 (304)
T PRK07340        117 ARTLAPAPPGDLLLIGTGVQARAHLEAFAAGLPVRRVWVRGRTAASAAAFCAHARALGPTAEP----LDGEAIP------  186 (304)
T ss_pred             HHHhCCCCCCEEEEECCcHHHHHHHHHHHHhCCCCEEEEEcCCHHHHHHHHHHHHhcCCeeEE----CCHHHHh------
Confidence            343333456789999999999999995656678888889888887755 455553211 0101    1222222      


Q ss_pred             hCCCceEEEeCCCCHHHHHHHHHhcccCCEEEEEccCCC
Q 017868          252 MGTGIDVSFDCAGLNKTMSTALGATCAGGKVCLVGMGHH  290 (365)
Q Consensus       252 ~~~~~d~vid~~g~~~~~~~~~~~l~~~G~~~~~g~~~~  290 (365)
                        ..+|+|+.|+.+...+-..  .++++-++..+|...+
T Consensus       187 --~~aDiVitaT~s~~Pl~~~--~~~~g~hi~~iGs~~p  221 (304)
T PRK07340        187 --EAVDLVVTATTSRTPVYPE--AARAGRLVVAVGAFTP  221 (304)
T ss_pred             --hcCCEEEEccCCCCceeCc--cCCCCCEEEecCCCCC
Confidence              4799999998865433333  3788888888886544

>PRK12828 short chain dehydrogenase; Provisional

Probab=95.90  E-value=0.087  Score=45.24  Aligned_cols=80  Identities=19%  Similarity=0.185  Sum_probs=46.9

Q ss_pred             CCCEEEEEcC-CHHHHHHHHHHHHHCCCCeEEEEeCChhHH-HHHHH---cCCCEEEeCCC-CcccHHHHHHHHHHHhCC
Q 017868          181 PETNVLIMGA-GPIGLVTMLGAPRAFGAPRIVIVDVDDYRL-SVAKE---IGADNIVKVST-NLQDIAEEVEKIQKAMGT  254 (365)
Q Consensus       181 ~g~~vlI~G~-g~~G~~ai~~l~~~~g~~~vi~v~~~~~~~-~~~~~---~g~~~~~~~~~-~~~~~~~~i~~~~~~~~~  254 (365)
                      ++.++||+|+ |.+|..+++.++ ..|++ |+.++++.++. +.+++   .+... +..+- +.+++...++++.+. -+
T Consensus         6 ~~k~vlItGatg~iG~~la~~l~-~~G~~-v~~~~r~~~~~~~~~~~~~~~~~~~-~~~D~~~~~~~~~~~~~~~~~-~~   81 (239)
T PRK12828          6 QGKVVAITGGFGGLGRATAAWLA-ARGAR-VALIGRGAAPLSQTLPGVPADALRI-GGIDLVDPQAARRAVDEVNRQ-FG   81 (239)
T ss_pred             CCCEEEEECCCCcHhHHHHHHHH-HCCCe-EEEEeCChHhHHHHHHHHhhcCceE-EEeecCCHHHHHHHHHHHHHH-hC
Confidence            3679999987 999999999555 45984 77777765542 22222   23322 11211 223333333333332 24


Q ss_pred             CceEEEeCCC
Q 017868          255 GIDVSFDCAG  264 (365)
Q Consensus       255 ~~d~vid~~g  264 (365)
                      ++|++|.+.|
T Consensus        82 ~~d~vi~~ag   91 (239)
T PRK12828         82 RLDALVNIAG   91 (239)
T ss_pred             CcCEEEECCc
Confidence            7999999876

>PRK07502 cyclohexadienyl dehydrogenase; Validated

Probab=95.89  E-value=0.12  Score=46.64  Aligned_cols=90  Identities=27%  Similarity=0.304  Sum_probs=57.9

Q ss_pred             CEEEEEcCCHHHHHHHHHHHHHCCC-CeEEEEeCChhHHHHHHHcCCCEEEeCCCCcccHHHHHHHHHHHhCCCceEEEe
Q 017868          183 TNVLIMGAGPIGLVTMLGAPRAFGA-PRIVIVDVDDYRLSVAKEIGADNIVKVSTNLQDIAEEVEKIQKAMGTGIDVSFD  261 (365)
Q Consensus       183 ~~vlI~G~g~~G~~ai~~l~~~~g~-~~vi~v~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~i~~~~~~~~~~~d~vid  261 (365)
                      .+|.|+|+|.+|...+. .++..|. ..|++.++++++.+.+++.|......     .+..+.        -...|+||.
T Consensus         7 ~~I~IIG~G~mG~sla~-~l~~~g~~~~V~~~dr~~~~~~~a~~~g~~~~~~-----~~~~~~--------~~~aDvVii   72 (307)
T PRK07502          7 DRVALIGIGLIGSSLAR-AIRRLGLAGEIVGADRSAETRARARELGLGDRVT-----TSAAEA--------VKGADLVIL   72 (307)
T ss_pred             cEEEEEeeCHHHHHHHH-HHHhcCCCcEEEEEECCHHHHHHHHhCCCCceec-----CCHHHH--------hcCCCEEEE
Confidence            57999999999998888 5556674 36888899988888888887532111     111111        146899999


Q ss_pred             CCCCHHH---HHHHHHhcccCCEEEEEc
Q 017868          262 CAGLNKT---MSTALGATCAGGKVCLVG  286 (365)
Q Consensus       262 ~~g~~~~---~~~~~~~l~~~G~~~~~g  286 (365)
                      |+.....   +......++++..++.++
T Consensus        73 avp~~~~~~v~~~l~~~l~~~~iv~dvg  100 (307)
T PRK07502         73 CVPVGASGAVAAEIAPHLKPGAIVTDVG  100 (307)
T ss_pred             CCCHHHHHHHHHHHHhhCCCCCEEEeCc
Confidence            8875422   222334456666555554

>PRK07533 enoyl-(acyl carrier protein) reductase; Provisional

Probab=95.86  E-value=0.11  Score=45.62  Aligned_cols=81  Identities=15%  Similarity=0.211  Sum_probs=47.6

Q ss_pred             CCCEEEEEcCC---HHHHHHHHHHHHHCCCCeEEEEeCChhHH----HHHHHcCCCEEEeCCC-CcccHHHHHHHHHHHh
Q 017868          181 PETNVLIMGAG---PIGLVTMLGAPRAFGAPRIVIVDVDDYRL----SVAKEIGADNIVKVST-NLQDIAEEVEKIQKAM  252 (365)
Q Consensus       181 ~g~~vlI~G~g---~~G~~ai~~l~~~~g~~~vi~v~~~~~~~----~~~~~~g~~~~~~~~~-~~~~~~~~i~~~~~~~  252 (365)
                      +|.++||+|++   ++|.++++.++ ..|++ |+.++++++..    ++.++++....+..+- +.++....+.+..+. 
T Consensus         9 ~~k~~lItGas~g~GIG~a~a~~la-~~G~~-v~l~~r~~~~~~~~~~~~~~~~~~~~~~~D~~~~~~v~~~~~~~~~~-   85 (258)
T PRK07533          9 AGKRGLVVGIANEQSIAWGCARAFR-ALGAE-LAVTYLNDKARPYVEPLAEELDAPIFLPLDVREPGQLEAVFARIAEE-   85 (258)
T ss_pred             CCCEEEEECCCCCCcHHHHHHHHHH-HcCCE-EEEEeCChhhHHHHHHHHHhhccceEEecCcCCHHHHHHHHHHHHHH-
Confidence            46789999863   89999999555 56995 55566654332    2334444333333322 223344444444332 


Q ss_pred             CCCceEEEeCCC
Q 017868          253 GTGIDVSFDCAG  264 (365)
Q Consensus       253 ~~~~d~vid~~g  264 (365)
                      -+.+|+++.++|
T Consensus        86 ~g~ld~lv~nAg   97 (258)
T PRK07533         86 WGRLDFLLHSIA   97 (258)
T ss_pred             cCCCCEEEEcCc
Confidence            257999999886

>PRK08862 short chain dehydrogenase; Provisional

Probab=95.84  E-value=0.11  Score=44.60  Aligned_cols=82  Identities=16%  Similarity=0.212  Sum_probs=50.4

Q ss_pred             CCCEEEEEcC-CHHHHHHHHHHHHHCCCCeEEEEeCChhHHHH----HHHcCCCE-EEeCC-CCcccHHHHHHHHHHHhC
Q 017868          181 PETNVLIMGA-GPIGLVTMLGAPRAFGAPRIVIVDVDDYRLSV----AKEIGADN-IVKVS-TNLQDIAEEVEKIQKAMG  253 (365)
Q Consensus       181 ~g~~vlI~G~-g~~G~~ai~~l~~~~g~~~vi~v~~~~~~~~~----~~~~g~~~-~~~~~-~~~~~~~~~i~~~~~~~~  253 (365)
                      +|.++||.|+ +++|.+.+..++ ..|+ +|+.+.+++++.+.    +++.+... .+..+ .+.++..+.+.+..+..+
T Consensus         4 ~~k~~lVtGas~GIG~aia~~la-~~G~-~V~~~~r~~~~l~~~~~~i~~~~~~~~~~~~D~~~~~~~~~~~~~~~~~~g   81 (227)
T PRK08862          4 KSSIILITSAGSVLGRTISCHFA-RLGA-TLILCDQDQSALKDTYEQCSALTDNVYSFQLKDFSQESIRHLFDAIEQQFN   81 (227)
T ss_pred             CCeEEEEECCccHHHHHHHHHHH-HCCC-EEEEEcCCHHHHHHHHHHHHhcCCCeEEEEccCCCHHHHHHHHHHHHHHhC
Confidence            4678999987 899999999555 5699 46777777765432    23334332 12211 233344444454444334


Q ss_pred             CCceEEEeCCC
Q 017868          254 TGIDVSFDCAG  264 (365)
Q Consensus       254 ~~~d~vid~~g  264 (365)
                      ..+|++|.+.|
T Consensus        82 ~~iD~li~nag   92 (227)
T PRK08862         82 RAPDVLVNNWT   92 (227)
T ss_pred             CCCCEEEECCc
Confidence            47999999886

>PRK06200 2,3-dihydroxy-2,3-dihydrophenylpropionate dehydrogenase; Provisional

Probab=95.83  E-value=0.12  Score=45.30  Aligned_cols=81  Identities=22%  Similarity=0.254  Sum_probs=50.4

Q ss_pred             CCCEEEEEcC-CHHHHHHHHHHHHHCCCCeEEEEeCChhHHHHH-HHcCCC-EEEeCCC-CcccHHHHHHHHHHHhCCCc
Q 017868          181 PETNVLIMGA-GPIGLVTMLGAPRAFGAPRIVIVDVDDYRLSVA-KEIGAD-NIVKVST-NLQDIAEEVEKIQKAMGTGI  256 (365)
Q Consensus       181 ~g~~vlI~G~-g~~G~~ai~~l~~~~g~~~vi~v~~~~~~~~~~-~~~g~~-~~~~~~~-~~~~~~~~i~~~~~~~~~~~  256 (365)
                      ++.++||+|+ +++|.++++.++ ..|+ .|+.+++++++.+.+ ++++.. ..+..+- +..+....+++..+. -+.+
T Consensus         5 ~~k~vlVtGas~gIG~~ia~~l~-~~G~-~V~~~~r~~~~~~~~~~~~~~~~~~~~~D~~~~~~~~~~~~~~~~~-~g~i   81 (263)
T PRK06200          5 HGQVALITGGGSGIGRALVERFL-AEGA-RVAVLERSAEKLASLRQRFGDHVLVVEGDVTSYADNQRAVDQTVDA-FGKL   81 (263)
T ss_pred             CCCEEEEeCCCchHHHHHHHHHH-HCCC-EEEEEeCCHHHHHHHHHHhCCcceEEEccCCCHHHHHHHHHHHHHh-cCCC
Confidence            4678999987 999999999454 6699 577777877766544 344421 1222221 223333444444332 3579


Q ss_pred             eEEEeCCC
Q 017868          257 DVSFDCAG  264 (365)
Q Consensus       257 d~vid~~g  264 (365)
                      |++|.++|
T Consensus        82 d~li~~ag   89 (263)
T PRK06200         82 DCFVGNAG   89 (263)
T ss_pred             CEEEECCC
Confidence            99999887

>PRK07904 short chain dehydrogenase; Provisional

Probab=95.81  E-value=0.081  Score=46.23  Aligned_cols=84  Identities=21%  Similarity=0.380  Sum_probs=49.3

Q ss_pred             CCCCCEEEEEcC-CHHHHHHHHHHHHHCCCCeEEEEeCChhH-HH-HH---HHcCCC--EEEeCCC-CcccHHHHHHHHH
Q 017868          179 IGPETNVLIMGA-GPIGLVTMLGAPRAFGAPRIVIVDVDDYR-LS-VA---KEIGAD--NIVKVST-NLQDIAEEVEKIQ  249 (365)
Q Consensus       179 ~~~g~~vlI~G~-g~~G~~ai~~l~~~~g~~~vi~v~~~~~~-~~-~~---~~~g~~--~~~~~~~-~~~~~~~~i~~~~  249 (365)
                      +..+.++||+|+ +++|.++++.+++.-|+ +|+.+.+++++ .+ ..   ++.+..  ..+..+- +..+..+.+++..
T Consensus         5 ~~~~~~vlItGas~giG~~la~~l~~~gg~-~V~~~~r~~~~~~~~~~~~l~~~~~~~v~~~~~D~~~~~~~~~~~~~~~   83 (253)
T PRK07904          5 VGNPQTILLLGGTSEIGLAICERYLKNAPA-RVVLAALPDDPRRDAAVAQMKAAGASSVEVIDFDALDTDSHPKVIDAAF   83 (253)
T ss_pred             cCCCcEEEEEcCCcHHHHHHHHHHHhcCCC-eEEEEeCCcchhHHHHHHHHHhcCCCceEEEEecCCChHHHHHHHHHHH
Confidence            456789999987 99999999856655357 56666666553 22 22   333321  2232222 2233333444444


Q ss_pred             HHhCCCceEEEeCCCC
Q 017868          250 KAMGTGIDVSFDCAGL  265 (365)
Q Consensus       250 ~~~~~~~d~vid~~g~  265 (365)
                      +  .+++|+++.+.|.
T Consensus        84 ~--~g~id~li~~ag~   97 (253)
T PRK07904         84 A--GGDVDVAIVAFGL   97 (253)
T ss_pred             h--cCCCCEEEEeeec
Confidence            3  2589999887763

>PRK06196 oxidoreductase; Provisional

Probab=95.79  E-value=0.088  Score=47.68  Aligned_cols=81  Identities=19%  Similarity=0.286  Sum_probs=48.2

Q ss_pred             CCCEEEEEcC-CHHHHHHHHHHHHHCCCCeEEEEeCChhHHHH-HHHcCCCEEEeCCC-CcccHHHHHHHHHHHhCCCce
Q 017868          181 PETNVLIMGA-GPIGLVTMLGAPRAFGAPRIVIVDVDDYRLSV-AKEIGADNIVKVST-NLQDIAEEVEKIQKAMGTGID  257 (365)
Q Consensus       181 ~g~~vlI~G~-g~~G~~ai~~l~~~~g~~~vi~v~~~~~~~~~-~~~~g~~~~~~~~~-~~~~~~~~i~~~~~~~~~~~d  257 (365)
                      .+.++||+|+ |++|.+++..++ ..|+ .|+.+.++.++.+. +.++.....+..+- +..+....+.++.+ ..+++|
T Consensus        25 ~~k~vlITGasggIG~~~a~~L~-~~G~-~Vv~~~R~~~~~~~~~~~l~~v~~~~~Dl~d~~~v~~~~~~~~~-~~~~iD  101 (315)
T PRK06196         25 SGKTAIVTGGYSGLGLETTRALA-QAGA-HVIVPARRPDVAREALAGIDGVEVVMLDLADLESVRAFAERFLD-SGRRID  101 (315)
T ss_pred             CCCEEEEeCCCchHHHHHHHHHH-HCCC-EEEEEeCCHHHHHHHHHHhhhCeEEEccCCCHHHHHHHHHHHHh-cCCCCC
Confidence            4678999987 999999999454 5698 46667777665543 33332122222222 22233333333322 135799


Q ss_pred             EEEeCCC
Q 017868          258 VSFDCAG  264 (365)
Q Consensus       258 ~vid~~g  264 (365)
                      ++|.++|
T Consensus       102 ~li~nAg  108 (315)
T PRK06196        102 ILINNAG  108 (315)
T ss_pred             EEEECCC
Confidence            9999887

>PRK06505 enoyl-(acyl carrier protein) reductase; Provisional

Probab=95.78  E-value=0.11  Score=45.86  Aligned_cols=81  Identities=19%  Similarity=0.249  Sum_probs=47.8

Q ss_pred             CCCEEEEEcCC---HHHHHHHHHHHHHCCCCeEEEEeCChhHH----HHHHHcCCCEEEeCCC-CcccHHHHHHHHHHHh
Q 017868          181 PETNVLIMGAG---PIGLVTMLGAPRAFGAPRIVIVDVDDYRL----SVAKEIGADNIVKVST-NLQDIAEEVEKIQKAM  252 (365)
Q Consensus       181 ~g~~vlI~G~g---~~G~~ai~~l~~~~g~~~vi~v~~~~~~~----~~~~~~g~~~~~~~~~-~~~~~~~~i~~~~~~~  252 (365)
                      ++.++||+|++   ++|.++++.++ ..|++ |+.+.++++..    ++.+++|....+..+- +.++....+++..+. 
T Consensus         6 ~~k~~lVTGas~~~GIG~aiA~~la-~~Ga~-V~~~~r~~~~~~~~~~~~~~~g~~~~~~~Dv~d~~~v~~~~~~~~~~-   82 (271)
T PRK06505          6 QGKRGLIMGVANDHSIAWGIAKQLA-AQGAE-LAFTYQGEALGKRVKPLAESLGSDFVLPCDVEDIASVDAVFEALEKK-   82 (271)
T ss_pred             CCCEEEEeCCCCCCcHHHHHHHHHH-hCCCE-EEEecCchHHHHHHHHHHHhcCCceEEeCCCCCHHHHHHHHHHHHHH-
Confidence            46789999874   89999999555 56994 55565554322    2234445433222222 223344444444332 


Q ss_pred             CCCceEEEeCCC
Q 017868          253 GTGIDVSFDCAG  264 (365)
Q Consensus       253 ~~~~d~vid~~g  264 (365)
                      -+.+|++++++|
T Consensus        83 ~g~iD~lVnnAG   94 (271)
T PRK06505         83 WGKLDFVVHAIG   94 (271)
T ss_pred             hCCCCEEEECCc
Confidence            358999999887

>PRK00107 gidB 16S rRNA methyltransferase GidB; Reviewed

Probab=95.77  E-value=0.11  Score=43.19  Aligned_cols=97  Identities=20%  Similarity=0.243  Sum_probs=59.9

Q ss_pred             CCCCCCEEEEEcCCHHHHHHHHHHHHHCCCCeEEEEeCChhHHHHH----HHcCCCEEEeCCCCcccHHHHHHHHHHHhC
Q 017868          178 NIGPETNVLIMGAGPIGLVTMLGAPRAFGAPRIVIVDVDDYRLSVA----KEIGADNIVKVSTNLQDIAEEVEKIQKAMG  253 (365)
Q Consensus       178 ~~~~g~~vlI~G~g~~G~~ai~~l~~~~g~~~vi~v~~~~~~~~~~----~~~g~~~~~~~~~~~~~~~~~i~~~~~~~~  253 (365)
                      .++++.+||-.|+|. |..++. +++......|++++.+++..+.+    ++.+.+.+.....   +..    +...  .
T Consensus        42 ~l~~g~~VLDiGcGt-G~~al~-la~~~~~~~V~giD~s~~~l~~A~~~~~~~~l~~i~~~~~---d~~----~~~~--~  110 (187)
T PRK00107         42 YLPGGERVLDVGSGA-GFPGIP-LAIARPELKVTLVDSLGKKIAFLREVAAELGLKNVTVVHG---RAE----EFGQ--E  110 (187)
T ss_pred             hcCCCCeEEEEcCCC-CHHHHH-HHHHCCCCeEEEEeCcHHHHHHHHHHHHHcCCCCEEEEec---cHh----hCCC--C
Confidence            345688999988754 554555 44444444799999998766544    4455543222222   111    1111  3


Q ss_pred             CCceEEEeCCC--CHHHHHHHHHhcccCCEEEEE
Q 017868          254 TGIDVSFDCAG--LNKTMSTALGATCAGGKVCLV  285 (365)
Q Consensus       254 ~~~d~vid~~g--~~~~~~~~~~~l~~~G~~~~~  285 (365)
                      ..+|+|+....  -...+..+.+.|+++|+++.+
T Consensus       111 ~~fDlV~~~~~~~~~~~l~~~~~~LkpGG~lv~~  144 (187)
T PRK00107        111 EKFDVVTSRAVASLSDLVELCLPLLKPGGRFLAL  144 (187)
T ss_pred             CCccEEEEccccCHHHHHHHHHHhcCCCeEEEEE
Confidence            57999997432  234666788999999999877

>TIGR03325 BphB_TodD cis-2,3-dihydrobiphenyl-2,3-diol dehydrogenase

Probab=95.75  E-value=0.099  Score=45.86  Aligned_cols=81  Identities=26%  Similarity=0.233  Sum_probs=49.1

Q ss_pred             CCCEEEEEcC-CHHHHHHHHHHHHHCCCCeEEEEeCChhHHHHHHH-cCCC-EEEeCCC-CcccHHHHHHHHHHHhCCCc
Q 017868          181 PETNVLIMGA-GPIGLVTMLGAPRAFGAPRIVIVDVDDYRLSVAKE-IGAD-NIVKVST-NLQDIAEEVEKIQKAMGTGI  256 (365)
Q Consensus       181 ~g~~vlI~G~-g~~G~~ai~~l~~~~g~~~vi~v~~~~~~~~~~~~-~g~~-~~~~~~~-~~~~~~~~i~~~~~~~~~~~  256 (365)
                      ++.++||+|+ +++|.++++.+ ...|+ +|+.++++.++.+.+.+ .+.. ..+..+- +..+..+.++++.+. -+.+
T Consensus         4 ~~k~vlItGas~gIG~~ia~~l-~~~G~-~V~~~~r~~~~~~~l~~~~~~~~~~~~~D~~~~~~~~~~~~~~~~~-~g~i   80 (262)
T TIGR03325         4 KGEVVLVTGGASGLGRAIVDRF-VAEGA-RVAVLDKSAAGLQELEAAHGDAVVGVEGDVRSLDDHKEAVARCVAA-FGKI   80 (262)
T ss_pred             CCcEEEEECCCChHHHHHHHHH-HHCCC-EEEEEeCCHHHHHHHHhhcCCceEEEEeccCCHHHHHHHHHHHHHH-hCCC
Confidence            4678999987 89999999945 45699 57777777766554433 3321 1121111 122333344443332 2578


Q ss_pred             eEEEeCCC
Q 017868          257 DVSFDCAG  264 (365)
Q Consensus       257 d~vid~~g  264 (365)
                      |++|.+.|
T Consensus        81 d~li~~Ag   88 (262)
T TIGR03325        81 DCLIPNAG   88 (262)
T ss_pred             CEEEECCC
Confidence            99999886

Members of this family occur as the BphD protein of biphenyl catabolism and as the TodD protein of toluene catabolism. Members catalyze the second step in each pathway and proved interchangeable when tested; the first and fourth enzymes in each pathway confer metabolic specificity. In the context of biphenyl degradation, the enzyme acts as cis-2,3-dihydrobiphenyl-2,3-diol dehydrogenase (EC 1.3.1.56), while in toluene degradation it acts as cis-toluene dihydrodiol dehydrogenase.

>PRK08217 fabG 3-ketoacyl-(acyl-carrier-protein) reductase; Provisional

Probab=95.73  E-value=0.16  Score=43.98  Aligned_cols=81  Identities=16%  Similarity=0.260  Sum_probs=48.8

Q ss_pred             CCCEEEEEcC-CHHHHHHHHHHHHHCCCCeEEEEeCChhHHHHH----HHcCCCE-EEeCCCC-cccHHHHHHHHHHHhC
Q 017868          181 PETNVLIMGA-GPIGLVTMLGAPRAFGAPRIVIVDVDDYRLSVA----KEIGADN-IVKVSTN-LQDIAEEVEKIQKAMG  253 (365)
Q Consensus       181 ~g~~vlI~G~-g~~G~~ai~~l~~~~g~~~vi~v~~~~~~~~~~----~~~g~~~-~~~~~~~-~~~~~~~i~~~~~~~~  253 (365)
                      ++.++||+|+ |++|+.+++ .+...|+ .|+.+++++++.+.+    +..+... .+..+-. ..+..+.++.+.+. .
T Consensus         4 ~~~~~lItG~~g~iG~~~a~-~l~~~G~-~vi~~~r~~~~~~~~~~~~~~~~~~~~~~~~D~~~~~~~~~~~~~~~~~-~   80 (253)
T PRK08217          4 KDKVIVITGGAQGLGRAMAE-YLAQKGA-KLALIDLNQEKLEEAVAECGALGTEVRGYAANVTDEEDVEATFAQIAED-F   80 (253)
T ss_pred             CCCEEEEECCCchHHHHHHH-HHHHCCC-EEEEEeCCHHHHHHHHHHHHhcCCceEEEEcCCCCHHHHHHHHHHHHHH-c
Confidence            4679999987 999999999 4455698 577777776654322    2334321 2222221 12333333333222 2


Q ss_pred             CCceEEEeCCC
Q 017868          254 TGIDVSFDCAG  264 (365)
Q Consensus       254 ~~~d~vid~~g  264 (365)
                      +++|.+|.++|
T Consensus        81 ~~id~vi~~ag   91 (253)
T PRK08217         81 GQLNGLINNAG   91 (253)
T ss_pred             CCCCEEEECCC
Confidence            57899999887

>PRK05872 short chain dehydrogenase; Provisional

Probab=95.70  E-value=0.1  Score=46.74  Aligned_cols=82  Identities=29%  Similarity=0.450  Sum_probs=51.4

Q ss_pred             CCCEEEEEcC-CHHHHHHHHHHHHHCCCCeEEEEeCChhHHH-HHHHcCCC-EEEe--CC-CCcccHHHHHHHHHHHhCC
Q 017868          181 PETNVLIMGA-GPIGLVTMLGAPRAFGAPRIVIVDVDDYRLS-VAKEIGAD-NIVK--VS-TNLQDIAEEVEKIQKAMGT  254 (365)
Q Consensus       181 ~g~~vlI~G~-g~~G~~ai~~l~~~~g~~~vi~v~~~~~~~~-~~~~~g~~-~~~~--~~-~~~~~~~~~i~~~~~~~~~  254 (365)
                      .+.++||+|+ +++|.++++ .+...|+ .|+.+.+++++.+ +.++++.. .++.  .+ .+.++....+.++.+. .+
T Consensus         8 ~gk~vlItGas~gIG~~ia~-~l~~~G~-~V~~~~r~~~~l~~~~~~l~~~~~~~~~~~Dv~d~~~v~~~~~~~~~~-~g   84 (296)
T PRK05872          8 AGKVVVVTGAARGIGAELAR-RLHARGA-KLALVDLEEAELAALAAELGGDDRVLTVVADVTDLAAMQAAAEEAVER-FG   84 (296)
T ss_pred             CCCEEEEECCCchHHHHHHH-HHHHCCC-EEEEEeCCHHHHHHHHHHhcCCCcEEEEEecCCCHHHHHHHHHHHHHH-cC
Confidence            5789999987 999999999 4456698 5777777777654 44556521 1111  11 1223333444444332 25


Q ss_pred             CceEEEeCCCC
Q 017868          255 GIDVSFDCAGL  265 (365)
Q Consensus       255 ~~d~vid~~g~  265 (365)
                      ++|++|.+.|.
T Consensus        85 ~id~vI~nAG~   95 (296)
T PRK05872         85 GIDVVVANAGI   95 (296)
T ss_pred             CCCEEEECCCc
Confidence            79999999884

>PRK07677 short chain dehydrogenase; Provisional

Probab=95.68  E-value=0.13  Score=44.84  Aligned_cols=80  Identities=25%  Similarity=0.284  Sum_probs=47.9

Q ss_pred             CCEEEEEcC-CHHHHHHHHHHHHHCCCCeEEEEeCChhHHHHH-H---HcCCC-EEEeCCC-CcccHHHHHHHHHHHhCC
Q 017868          182 ETNVLIMGA-GPIGLVTMLGAPRAFGAPRIVIVDVDDYRLSVA-K---EIGAD-NIVKVST-NLQDIAEEVEKIQKAMGT  254 (365)
Q Consensus       182 g~~vlI~G~-g~~G~~ai~~l~~~~g~~~vi~v~~~~~~~~~~-~---~~g~~-~~~~~~~-~~~~~~~~i~~~~~~~~~  254 (365)
                      |.++||+|+ +++|.++++.+ ...|+ .|+.+++++++.+.+ +   +.+.. ..+..+- +.+++...+.++.+. -+
T Consensus         1 ~k~~lItG~s~giG~~ia~~l-~~~G~-~Vi~~~r~~~~~~~~~~~~~~~~~~~~~~~~D~~~~~~~~~~~~~~~~~-~~   77 (252)
T PRK07677          1 EKVVIITGGSSGMGKAMAKRF-AEEGA-NVVITGRTKEKLEEAKLEIEQFPGQVLTVQMDVRNPEDVQKMVEQIDEK-FG   77 (252)
T ss_pred             CCEEEEeCCCChHHHHHHHHH-HHCCC-EEEEEeCCHHHHHHHHHHHHhcCCcEEEEEecCCCHHHHHHHHHHHHHH-hC
Confidence            468999987 99999999955 45699 677777776654432 2   22221 1222222 223333334443332 25


Q ss_pred             CceEEEeCCC
Q 017868          255 GIDVSFDCAG  264 (365)
Q Consensus       255 ~~d~vid~~g  264 (365)
                      ++|++|.+.|
T Consensus        78 ~id~lI~~ag   87 (252)
T PRK07677         78 RIDALINNAA   87 (252)
T ss_pred             CccEEEECCC
Confidence            7999999887

>PRK06841 short chain dehydrogenase; Provisional

Probab=95.66  E-value=0.15  Score=44.47  Aligned_cols=82  Identities=22%  Similarity=0.252  Sum_probs=50.1

Q ss_pred             CCCEEEEEcC-CHHHHHHHHHHHHHCCCCeEEEEeCChhHHHHHHHcCCCE--EEeCCC-CcccHHHHHHHHHHHhCCCc
Q 017868          181 PETNVLIMGA-GPIGLVTMLGAPRAFGAPRIVIVDVDDYRLSVAKEIGADN--IVKVST-NLQDIAEEVEKIQKAMGTGI  256 (365)
Q Consensus       181 ~g~~vlI~G~-g~~G~~ai~~l~~~~g~~~vi~v~~~~~~~~~~~~~g~~~--~~~~~~-~~~~~~~~i~~~~~~~~~~~  256 (365)
                      .+.++||+|+ |.+|..+++.++ ..|+ .|+.+.++++..+...++....  .+..+- +.+++...+.++.+. ..++
T Consensus        14 ~~k~vlItGas~~IG~~la~~l~-~~G~-~Vi~~~r~~~~~~~~~~~~~~~~~~~~~Dl~~~~~~~~~~~~~~~~-~~~~   90 (255)
T PRK06841         14 SGKVAVVTGGASGIGHAIAELFA-AKGA-RVALLDRSEDVAEVAAQLLGGNAKGLVCDVSDSQSVEAAVAAVISA-FGRI   90 (255)
T ss_pred             CCCEEEEECCCChHHHHHHHHHH-HCCC-EEEEEeCCHHHHHHHHHhhCCceEEEEecCCCHHHHHHHHHHHHHH-hCCC
Confidence            4679999987 999999999554 5698 5777777776655555443221  222222 222333333333322 2579


Q ss_pred             eEEEeCCCC
Q 017868          257 DVSFDCAGL  265 (365)
Q Consensus       257 d~vid~~g~  265 (365)
                      |++|.++|.
T Consensus        91 d~vi~~ag~   99 (255)
T PRK06841         91 DILVNSAGV   99 (255)
T ss_pred             CEEEECCCC
Confidence            999998873

>PRK06483 dihydromonapterin reductase; Provisional

Probab=95.66  E-value=0.13  Score=44.30  Aligned_cols=80  Identities=19%  Similarity=0.284  Sum_probs=47.6

Q ss_pred             CCEEEEEcC-CHHHHHHHHHHHHHCCCCeEEEEeCChhH-HHHHHHcCCCEEEeCCC-CcccHHHHHHHHHHHhCCCceE
Q 017868          182 ETNVLIMGA-GPIGLVTMLGAPRAFGAPRIVIVDVDDYR-LSVAKEIGADNIVKVST-NLQDIAEEVEKIQKAMGTGIDV  258 (365)
Q Consensus       182 g~~vlI~G~-g~~G~~ai~~l~~~~g~~~vi~v~~~~~~-~~~~~~~g~~~~~~~~~-~~~~~~~~i~~~~~~~~~~~d~  258 (365)
                      +.++||+|+ +++|.++++.+ ...|+ +|+.++++++. .+.+++.++. .+..+- +.++....+.+..+. -+++|+
T Consensus         2 ~k~vlItGas~gIG~~ia~~l-~~~G~-~V~~~~r~~~~~~~~~~~~~~~-~~~~D~~~~~~~~~~~~~~~~~-~~~id~   77 (236)
T PRK06483          2 PAPILITGAGQRIGLALAWHL-LAQGQ-PVIVSYRTHYPAIDGLRQAGAQ-CIQADFSTNAGIMAFIDELKQH-TDGLRA   77 (236)
T ss_pred             CceEEEECCCChHHHHHHHHH-HHCCC-eEEEEeCCchhHHHHHHHcCCE-EEEcCCCCHHHHHHHHHHHHhh-CCCccE
Confidence            468999987 99999999945 45699 46666665433 3444555543 222222 223333344443322 247999


Q ss_pred             EEeCCCC
Q 017868          259 SFDCAGL  265 (365)
Q Consensus       259 vid~~g~  265 (365)
                      ++.+.|.
T Consensus        78 lv~~ag~   84 (236)
T PRK06483         78 IIHNASD   84 (236)
T ss_pred             EEECCcc
Confidence            9998873

>cd00755 YgdL_like Family of activating enzymes (E1) of ubiquitin-like proteins related to the E

Probab=95.63  E-value=0.071  Score=45.79  Aligned_cols=34  Identities=21%  Similarity=0.427  Sum_probs=28.1

Q ss_pred             CCEEEEEcCCHHHHHHHHHHHHHCCCCeEEEEeCC
Q 017868          182 ETNVLIMGAGPIGLVTMLGAPRAFGAPRIVIVDVD  216 (365)
Q Consensus       182 g~~vlI~G~g~~G~~ai~~l~~~~g~~~vi~v~~~  216 (365)
                      ..+|+|.|+|++|..++..| -+.|...+..+|.+
T Consensus        11 ~~~VlVvG~GGvGs~va~~L-ar~GVg~i~LvD~D   44 (231)
T cd00755          11 NAHVAVVGLGGVGSWAAEAL-ARSGVGKLTLIDFD   44 (231)
T ss_pred             CCCEEEECCCHHHHHHHHHH-HHcCCCEEEEECCC
Confidence            35899999999999999945 56699888888754

coli hypothetical protein ygdL. The common reaction mechanism catalyzed by E1-like enzymes begins with a nucleophilic attack of the C-terminal carboxylate of the ubiquitin-like substrate, on the alpha-phosphate of an ATP molecule bound at the active site of the activating enzymes, leading to the formation of a high-energy acyladenylate intermediate and subsequently to the formation of a thiocarboxylate at the C termini of the substrate. The exact function of this family is unknown.

>TIGR01832 kduD 2-deoxy-D-gluconate 3-dehydrogenase

Probab=95.62  E-value=0.19  Score=43.52  Aligned_cols=82  Identities=20%  Similarity=0.236  Sum_probs=48.1

Q ss_pred             CCCEEEEEcC-CHHHHHHHHHHHHHCCCCeEEEEeCChh--HHHHHHHcCCC-EEEeCCC-CcccHHHHHHHHHHHhCCC
Q 017868          181 PETNVLIMGA-GPIGLVTMLGAPRAFGAPRIVIVDVDDY--RLSVAKEIGAD-NIVKVST-NLQDIAEEVEKIQKAMGTG  255 (365)
Q Consensus       181 ~g~~vlI~G~-g~~G~~ai~~l~~~~g~~~vi~v~~~~~--~~~~~~~~g~~-~~~~~~~-~~~~~~~~i~~~~~~~~~~  255 (365)
                      .+.++||+|+ |++|.+++..++ ..|+ .|+.+++++.  ..+.+++++.. ..+..+- +.+++...+++..+. .++
T Consensus         4 ~~k~vlItGas~gIG~~ia~~l~-~~G~-~vi~~~r~~~~~~~~~~~~~~~~~~~~~~D~~~~~~~~~~~~~~~~~-~~~   80 (248)
T TIGR01832         4 EGKVALVTGANTGLGQGIAVGLA-EAGA-DIVGAGRSEPSETQQQVEALGRRFLSLTADLSDIEAIKALVDSAVEE-FGH   80 (248)
T ss_pred             CCCEEEEECCCchHHHHHHHHHH-HCCC-EEEEEcCchHHHHHHHHHhcCCceEEEECCCCCHHHHHHHHHHHHHH-cCC
Confidence            4789999987 999999999555 5598 5666666542  12334444432 2222222 223333333333322 357


Q ss_pred             ceEEEeCCCC
Q 017868          256 IDVSFDCAGL  265 (365)
Q Consensus       256 ~d~vid~~g~  265 (365)
                      +|++|.++|.
T Consensus        81 ~d~li~~ag~   90 (248)
T TIGR01832        81 IDILVNNAGI   90 (248)
T ss_pred             CCEEEECCCC
Confidence            9999998873

This model describes 2-deoxy-D-gluconate 3-dehydrogenase (also called 2-keto-3-deoxygluconate oxidoreductase), a member of the family of short-chain-alcohol dehydrogenases (pfam00106). This protein has been characterized in Erwinia chrysanthemi as an enzyme of pectin degradation.

>COG0373 HemA Glutamyl-tRNA reductase [Coenzyme metabolism]

Probab=95.61  E-value=0.095  Score=48.64  Aligned_cols=73  Identities=22%  Similarity=0.325  Sum_probs=53.9

Q ss_pred             CCCCEEEEEcCCHHHHHHHHHHHHHCCCCeEEEEeCChhHHH-HHHHcCCCEEEeCCCCcccHHHHHHHHHHHhCCCceE
Q 017868          180 GPETNVLIMGAGPIGLVTMLGAPRAFGAPRIVIVDVDDYRLS-VAKEIGADNIVKVSTNLQDIAEEVEKIQKAMGTGIDV  258 (365)
Q Consensus       180 ~~g~~vlI~G~g~~G~~ai~~l~~~~g~~~vi~v~~~~~~~~-~~~~~g~~~~~~~~~~~~~~~~~i~~~~~~~~~~~d~  258 (365)
                      -.+.++||.|+|-+|..++. .+...|...+..+.++.+|.+ +++++|+..+ .++    +    +...    -..+|+
T Consensus       176 L~~~~vlvIGAGem~~lva~-~L~~~g~~~i~IaNRT~erA~~La~~~~~~~~-~l~----e----l~~~----l~~~Dv  241 (414)
T COG0373         176 LKDKKVLVIGAGEMGELVAK-HLAEKGVKKITIANRTLERAEELAKKLGAEAV-ALE----E----LLEA----LAEADV  241 (414)
T ss_pred             cccCeEEEEcccHHHHHHHH-HHHhCCCCEEEEEcCCHHHHHHHHHHhCCeee-cHH----H----HHHh----hhhCCE
Confidence            36789999999999999999 555668888888888888764 7799995432 211    1    2221    257999


Q ss_pred             EEeCCCCH
Q 017868          259 SFDCAGLN  266 (365)
Q Consensus       259 vid~~g~~  266 (365)
                      ||.+++.+
T Consensus       242 VissTsa~  249 (414)
T COG0373         242 VISSTSAP  249 (414)
T ss_pred             EEEecCCC
Confidence            99999865

>cd01065 NAD_bind_Shikimate_DH NAD(P) binding domain of Shikimate dehydrogenase

Probab=95.59  E-value=0.14  Score=40.87  Aligned_cols=101  Identities=24%  Similarity=0.248  Sum_probs=58.7

Q ss_pred             HHhcCC-CCCCEEEEEcCCHHHHHHHHHHHHHCCCCeEEEEeCChhHHH-HHHHcCCCE-EEeCCCCcccHHHHHHHHHH
Q 017868          174 CRRANI-GPETNVLIMGAGPIGLVTMLGAPRAFGAPRIVIVDVDDYRLS-VAKEIGADN-IVKVSTNLQDIAEEVEKIQK  250 (365)
Q Consensus       174 ~~~~~~-~~g~~vlI~G~g~~G~~ai~~l~~~~g~~~vi~v~~~~~~~~-~~~~~g~~~-~~~~~~~~~~~~~~i~~~~~  250 (365)
                      ++...+ ..+.+++|.|+|.+|..+++ .+...|...+.+++++.++.+ ++++++... ....    .+..+.      
T Consensus        10 ~~~~~~~~~~~~i~iiG~G~~g~~~a~-~l~~~g~~~v~v~~r~~~~~~~~~~~~~~~~~~~~~----~~~~~~------   78 (155)
T cd01065          10 LEEAGIELKGKKVLILGAGGAARAVAY-ALAELGAAKIVIVNRTLEKAKALAERFGELGIAIAY----LDLEEL------   78 (155)
T ss_pred             HHhhCCCCCCCEEEEECCcHHHHHHHH-HHHHCCCCEEEEEcCCHHHHHHHHHHHhhcccceee----cchhhc------
Confidence            344343 45688999999999999998 445566556888888877654 456666431 0011    111111      


Q ss_pred             HhCCCceEEEeCCCCHHH----HHHHHHhcccCCEEEEEcc
Q 017868          251 AMGTGIDVSFDCAGLNKT----MSTALGATCAGGKVCLVGM  287 (365)
Q Consensus       251 ~~~~~~d~vid~~g~~~~----~~~~~~~l~~~G~~~~~g~  287 (365)
                        -.++|+|+.|+.....    .......+.++..++.++.
T Consensus        79 --~~~~Dvvi~~~~~~~~~~~~~~~~~~~~~~~~~v~D~~~  117 (155)
T cd01065          79 --LAEADLIINTTPVGMKPGDELPLPPSLLKPGGVVYDVVY  117 (155)
T ss_pred             --cccCCEEEeCcCCCCCCCCCCCCCHHHcCCCCEEEEcCc
Confidence              2579999999875421    1111223455555555543

Shikimate dehydrogenase (DH) is an amino acid DH family member. Shikimate pathway links metabolism of carbohydrates to de novo biosynthesis of aromatic amino acids, quinones and folate. It is essential in plants, bacteria, and fungi but absent in mammals, thus making enzymes involved in this pathway ideal targets for broad spectrum antibiotics and herbicides. Shikimate DH catalyzes the reduction of 3-hydroshikimate to shikimate using the cofactor NADH. Amino acid DH-like NAD(P)-binding domains are members of the Rossmann fold superfamily and include glutamate, leucine, and phenylalanine DHs, methylene tetrahydrofolate DH, methylene-tetrahydromethanopterin DH, methylene-tetrahydropholate DH/cyclohydrolase, Shikimate DH-like proteins, malate oxidoreductases, and glutamyl tRNA reductase. Amino acid DHs catalyze the deamination of amino acids to keto acids with NAD(P)+ as a cofactor. The NAD(P)-binding Rossmann

>PRK08642 fabG 3-ketoacyl-(acyl-carrier-protein) reductase; Provisional

Probab=95.58  E-value=0.13  Score=44.66  Aligned_cols=82  Identities=17%  Similarity=0.212  Sum_probs=47.1

Q ss_pred             CCEEEEEcC-CHHHHHHHHHHHHHCCCCeEEEEeCChhHHH-HHHHcCCC-EEEeCCC-CcccHHHHHHHHHHHhCCCce
Q 017868          182 ETNVLIMGA-GPIGLVTMLGAPRAFGAPRIVIVDVDDYRLS-VAKEIGAD-NIVKVST-NLQDIAEEVEKIQKAMGTGID  257 (365)
Q Consensus       182 g~~vlI~G~-g~~G~~ai~~l~~~~g~~~vi~v~~~~~~~~-~~~~~g~~-~~~~~~~-~~~~~~~~i~~~~~~~~~~~d  257 (365)
                      +.++||+|+ |++|..++..+ ...|+++++...+++++.+ +..+++.. ..+..+- +.+++.+.+.+..+..+.++|
T Consensus         5 ~k~ilItGas~gIG~~la~~l-~~~G~~vv~~~~~~~~~~~~~~~~~~~~~~~~~~D~~~~~~~~~~~~~~~~~~g~~id   83 (253)
T PRK08642          5 EQTVLVTGGSRGLGAAIARAF-AREGARVVVNYHQSEDAAEALADELGDRAIALQADVTDREQVQAMFATATEHFGKPIT   83 (253)
T ss_pred             CCEEEEeCCCCcHHHHHHHHH-HHCCCeEEEEcCCCHHHHHHHHHHhCCceEEEEcCCCCHHHHHHHHHHHHHHhCCCCe
Confidence            568999987 99999999944 5669865444444444443 33444422 1222221 223334444444333344599


Q ss_pred             EEEeCCC
Q 017868          258 VSFDCAG  264 (365)
Q Consensus       258 ~vid~~g  264 (365)
                      ++|.+.|
T Consensus        84 ~li~~ag   90 (253)
T PRK08642         84 TVVNNAL   90 (253)
T ss_pred             EEEECCC
Confidence            9999875

>PRK07774 short chain dehydrogenase; Provisional

Probab=95.58  E-value=0.13  Score=44.54  Aligned_cols=82  Identities=26%  Similarity=0.333  Sum_probs=47.7

Q ss_pred             CCCEEEEEcC-CHHHHHHHHHHHHHCCCCeEEEEeCChhHHH-HHHHc---CCC-EEEeCCC-CcccHHHHHHHHHHHhC
Q 017868          181 PETNVLIMGA-GPIGLVTMLGAPRAFGAPRIVIVDVDDYRLS-VAKEI---GAD-NIVKVST-NLQDIAEEVEKIQKAMG  253 (365)
Q Consensus       181 ~g~~vlI~G~-g~~G~~ai~~l~~~~g~~~vi~v~~~~~~~~-~~~~~---g~~-~~~~~~~-~~~~~~~~i~~~~~~~~  253 (365)
                      .+.++||+|+ |.+|..++..++ ..|+ .++.+++++++.+ ..+.+   +.. ..+..+- +.+++...++.+.+. .
T Consensus         5 ~~k~vlItGasg~iG~~la~~l~-~~g~-~vi~~~r~~~~~~~~~~~~~~~~~~~~~~~~Dl~~~~~~~~~~~~~~~~-~   81 (250)
T PRK07774          5 DDKVAIVTGAAGGIGQAYAEALA-REGA-SVVVADINAEGAERVAKQIVADGGTAIAVQVDVSDPDSAKAMADATVSA-F   81 (250)
T ss_pred             CCCEEEEECCCchHHHHHHHHHH-HCCC-EEEEEeCCHHHHHHHHHHHHhcCCcEEEEEcCCCCHHHHHHHHHHHHHH-h
Confidence            4678999987 999999999555 5598 5777777765543 22222   221 1222222 122233333333332 2


Q ss_pred             CCceEEEeCCCC
Q 017868          254 TGIDVSFDCAGL  265 (365)
Q Consensus       254 ~~~d~vid~~g~  265 (365)
                      +++|++|.++|.
T Consensus        82 ~~id~vi~~ag~   93 (250)
T PRK07774         82 GGIDYLVNNAAI   93 (250)
T ss_pred             CCCCEEEECCCC
Confidence            479999998883

>PRK08339 short chain dehydrogenase; Provisional

Probab=95.57  E-value=0.13  Score=45.31  Aligned_cols=81  Identities=16%  Similarity=0.224  Sum_probs=48.6

Q ss_pred             CCCEEEEEcC-CHHHHHHHHHHHHHCCCCeEEEEeCChhHHHHH-HHc----CCC-EEEeCCC-CcccHHHHHHHHHHHh
Q 017868          181 PETNVLIMGA-GPIGLVTMLGAPRAFGAPRIVIVDVDDYRLSVA-KEI----GAD-NIVKVST-NLQDIAEEVEKIQKAM  252 (365)
Q Consensus       181 ~g~~vlI~G~-g~~G~~ai~~l~~~~g~~~vi~v~~~~~~~~~~-~~~----g~~-~~~~~~~-~~~~~~~~i~~~~~~~  252 (365)
                      ++.++||+|+ +++|.++++.++ ..|+ +|+.+++++++.+.+ +++    +.. ..+..+- +..+....+.++.+  
T Consensus         7 ~~k~~lItGas~gIG~aia~~l~-~~G~-~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~Dv~~~~~i~~~~~~~~~--   82 (263)
T PRK08339          7 SGKLAFTTASSKGIGFGVARVLA-RAGA-DVILLSRNEENLKKAREKIKSESNVDVSYIVADLTKREDLERTVKELKN--   82 (263)
T ss_pred             CCCEEEEeCCCCcHHHHHHHHHH-HCCC-EEEEEeCCHHHHHHHHHHHHhhcCCceEEEEecCCCHHHHHHHHHHHHh--
Confidence            4778999987 899999999554 5699 577777777665432 222    321 1222222 22333333443322  


Q ss_pred             CCCceEEEeCCCC
Q 017868          253 GTGIDVSFDCAGL  265 (365)
Q Consensus       253 ~~~~d~vid~~g~  265 (365)
                      -+++|+++.+.|.
T Consensus        83 ~g~iD~lv~nag~   95 (263)
T PRK08339         83 IGEPDIFFFSTGG   95 (263)
T ss_pred             hCCCcEEEECCCC
Confidence            3579999998873

>PRK07806 short chain dehydrogenase; Provisional

Probab=95.55  E-value=0.41  Score=41.42  Aligned_cols=104  Identities=22%  Similarity=0.226  Sum_probs=55.9

Q ss_pred             CCCEEEEEcC-CHHHHHHHHHHHHHCCCCeEEEEeCCh-hHHH-HH---HHcCCC-EEEeCCC-CcccHHHHHHHHHHHh
Q 017868          181 PETNVLIMGA-GPIGLVTMLGAPRAFGAPRIVIVDVDD-YRLS-VA---KEIGAD-NIVKVST-NLQDIAEEVEKIQKAM  252 (365)
Q Consensus       181 ~g~~vlI~G~-g~~G~~ai~~l~~~~g~~~vi~v~~~~-~~~~-~~---~~~g~~-~~~~~~~-~~~~~~~~i~~~~~~~  252 (365)
                      ++.++||+|+ |.+|..++..+ ...|++ |+++.++. ++.+ +.   +..+.. ..+..+- +.++..+.++++.+. 
T Consensus         5 ~~k~vlItGasggiG~~l~~~l-~~~G~~-V~~~~r~~~~~~~~~~~~l~~~~~~~~~~~~D~~~~~~~~~~~~~~~~~-   81 (248)
T PRK07806          5 PGKTALVTGSSRGIGADTAKIL-AGAGAH-VVVNYRQKAPRANKVVAEIEAAGGRASAVGADLTDEESVAALMDTAREE-   81 (248)
T ss_pred             CCcEEEEECCCCcHHHHHHHHH-HHCCCE-EEEEeCCchHhHHHHHHHHHhcCCceEEEEcCCCCHHHHHHHHHHHHHh-
Confidence            4678999987 99999999944 456985 55555543 2222 22   222322 1122221 222333333333221 


Q ss_pred             CCCceEEEeCCCCH-------------------HHHHHHHHhcccCCEEEEEcc
Q 017868          253 GTGIDVSFDCAGLN-------------------KTMSTALGATCAGGKVCLVGM  287 (365)
Q Consensus       253 ~~~~d~vid~~g~~-------------------~~~~~~~~~l~~~G~~~~~g~  287 (365)
                      .+++|++|.+.|..                   ..++.+...+...|+++.++.
T Consensus        82 ~~~~d~vi~~ag~~~~~~~~~~~~~~vn~~~~~~l~~~~~~~~~~~~~iv~isS  135 (248)
T PRK07806         82 FGGLDALVLNASGGMESGMDEDYAMRLNRDAQRNLARAALPLMPAGSRVVFVTS  135 (248)
T ss_pred             CCCCcEEEECCCCCCCCCCCcceeeEeeeHHHHHHHHHHHhhccCCceEEEEeC
Confidence            24789998877632                   123334444555678887754

>PRK07831 short chain dehydrogenase; Provisional

Probab=95.55  E-value=0.18  Score=44.11  Aligned_cols=84  Identities=25%  Similarity=0.328  Sum_probs=49.7

Q ss_pred             CCCCCEEEEEcC-C-HHHHHHHHHHHHHCCCCeEEEEeCChhHHHHH-H---H-cCCCEE--EeCCCC-cccHHHHHHHH
Q 017868          179 IGPETNVLIMGA-G-PIGLVTMLGAPRAFGAPRIVIVDVDDYRLSVA-K---E-IGADNI--VKVSTN-LQDIAEEVEKI  248 (365)
Q Consensus       179 ~~~g~~vlI~G~-g-~~G~~ai~~l~~~~g~~~vi~v~~~~~~~~~~-~---~-~g~~~~--~~~~~~-~~~~~~~i~~~  248 (365)
                      +..+.++||+|+ | ++|.++++ .+...|++ |+.+++++++.+.. +   + ++...+  +..+-. .++....+.+.
T Consensus        14 ~~~~k~vlItG~sg~gIG~~ia~-~l~~~G~~-V~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~Dl~~~~~~~~~~~~~   91 (262)
T PRK07831         14 LLAGKVVLVTAAAGTGIGSATAR-RALEEGAR-VVISDIHERRLGETADELAAELGLGRVEAVVCDVTSEAQVDALIDAA   91 (262)
T ss_pred             ccCCCEEEEECCCcccHHHHHHH-HHHHcCCE-EEEEeCCHHHHHHHHHHHHHhcCCceEEEEEccCCCHHHHHHHHHHH
Confidence            445789999986 5 79999999 44566984 67777776654332 2   1 443222  222221 12333333333


Q ss_pred             HHHhCCCceEEEeCCCC
Q 017868          249 QKAMGTGIDVSFDCAGL  265 (365)
Q Consensus       249 ~~~~~~~~d~vid~~g~  265 (365)
                      .+. .+++|++|.+.|.
T Consensus        92 ~~~-~g~id~li~~ag~  107 (262)
T PRK07831         92 VER-LGRLDVLVNNAGL  107 (262)
T ss_pred             HHH-cCCCCEEEECCCC
Confidence            332 3579999999983

>PRK05867 short chain dehydrogenase; Provisional

Probab=95.54  E-value=0.16  Score=44.27  Aligned_cols=81  Identities=26%  Similarity=0.286  Sum_probs=48.6

Q ss_pred             CCCEEEEEcC-CHHHHHHHHHHHHHCCCCeEEEEeCChhHHHHH-HHc---CCCE-EEeCCC-CcccHHHHHHHHHHHhC
Q 017868          181 PETNVLIMGA-GPIGLVTMLGAPRAFGAPRIVIVDVDDYRLSVA-KEI---GADN-IVKVST-NLQDIAEEVEKIQKAMG  253 (365)
Q Consensus       181 ~g~~vlI~G~-g~~G~~ai~~l~~~~g~~~vi~v~~~~~~~~~~-~~~---g~~~-~~~~~~-~~~~~~~~i~~~~~~~~  253 (365)
                      .+.++||+|+ +++|.++++.++ ..|+ +|+.+.++.++.+.+ +++   +... .+..+- +.++..+.+.++.+. -
T Consensus         8 ~~k~vlVtGas~gIG~~ia~~l~-~~G~-~V~~~~r~~~~~~~~~~~l~~~~~~~~~~~~D~~~~~~~~~~~~~~~~~-~   84 (253)
T PRK05867          8 HGKRALITGASTGIGKRVALAYV-EAGA-QVAIAARHLDALEKLADEIGTSGGKVVPVCCDVSQHQQVTSMLDQVTAE-L   84 (253)
T ss_pred             CCCEEEEECCCchHHHHHHHHHH-HCCC-EEEEEcCCHHHHHHHHHHHHhcCCeEEEEEccCCCHHHHHHHHHHHHHH-h
Confidence            4788999987 999999999554 5699 567777776654432 222   3221 222221 223333334443332 2


Q ss_pred             CCceEEEeCCC
Q 017868          254 TGIDVSFDCAG  264 (365)
Q Consensus       254 ~~~d~vid~~g  264 (365)
                      +++|+++.+.|
T Consensus        85 g~id~lv~~ag   95 (253)
T PRK05867         85 GGIDIAVCNAG   95 (253)
T ss_pred             CCCCEEEECCC
Confidence            57999999887

>COG0421 SpeE Spermidine synthase [Amino acid transport and metabolism]

Probab=95.53  E-value=0.22  Score=44.04  Aligned_cols=98  Identities=17%  Similarity=0.157  Sum_probs=62.3

Q ss_pred             CEEEEEcCCHHHHHHHHHHHHHCCCCeEEEEeCChhHHHHHHHc-CCCEEEeCCCCc----ccHHHHHHHHHHHhCCCce
Q 017868          183 TNVLIMGAGPIGLVTMLGAPRAFGAPRIVIVDVDDYRLSVAKEI-GADNIVKVSTNL----QDIAEEVEKIQKAMGTGID  257 (365)
Q Consensus       183 ~~vlI~G~g~~G~~ai~~l~~~~g~~~vi~v~~~~~~~~~~~~~-g~~~~~~~~~~~----~~~~~~i~~~~~~~~~~~d  257 (365)
                      .+|||.|+|. |..+=. +++....++++.|+-+++-.++++++ +....-..+.+.    .|-.+.+++    ...++|
T Consensus        78 k~VLiiGgGd-G~tlRe-vlkh~~ve~i~~VEID~~Vi~~ar~~l~~~~~~~~dpRv~i~i~Dg~~~v~~----~~~~fD  151 (282)
T COG0421          78 KRVLIIGGGD-GGTLRE-VLKHLPVERITMVEIDPAVIELARKYLPEPSGGADDPRVEIIIDDGVEFLRD----CEEKFD  151 (282)
T ss_pred             CeEEEECCCc-cHHHHH-HHhcCCcceEEEEEcCHHHHHHHHHhccCcccccCCCceEEEeccHHHHHHh----CCCcCC
Confidence            5999997654 444555 66777788999999999999988774 322210001111    122223332    355899


Q ss_pred             EEEe-CCCC---------HHHHHHHHHhcccCCEEEEEc
Q 017868          258 VSFD-CAGL---------NKTMSTALGATCAGGKVCLVG  286 (365)
Q Consensus       258 ~vid-~~g~---------~~~~~~~~~~l~~~G~~~~~g  286 (365)
                      +||- +...         ..-+..+.++|+++|.++..+
T Consensus       152 vIi~D~tdp~gp~~~Lft~eFy~~~~~~L~~~Gi~v~q~  190 (282)
T COG0421         152 VIIVDSTDPVGPAEALFTEEFYEGCRRALKEDGIFVAQA  190 (282)
T ss_pred             EEEEcCCCCCCcccccCCHHHHHHHHHhcCCCcEEEEec
Confidence            9864 3322         345668889999999999873

>PRK12829 short chain dehydrogenase; Provisional

Probab=95.51  E-value=0.13  Score=44.92  Aligned_cols=83  Identities=19%  Similarity=0.255  Sum_probs=49.5

Q ss_pred             CCCCEEEEEcC-CHHHHHHHHHHHHHCCCCeEEEEeCChhHHHHH-HHcCCC--EEEeCCCC-cccHHHHHHHHHHHhCC
Q 017868          180 GPETNVLIMGA-GPIGLVTMLGAPRAFGAPRIVIVDVDDYRLSVA-KEIGAD--NIVKVSTN-LQDIAEEVEKIQKAMGT  254 (365)
Q Consensus       180 ~~g~~vlI~G~-g~~G~~ai~~l~~~~g~~~vi~v~~~~~~~~~~-~~~g~~--~~~~~~~~-~~~~~~~i~~~~~~~~~  254 (365)
                      -++.++||+|+ |.+|..++..+ ...|+ .|+.+.++++..+.+ +.+.-.  ..+..+-. ..++.+.+.+..+. -.
T Consensus         9 ~~~~~vlItGa~g~iG~~~a~~L-~~~g~-~V~~~~r~~~~~~~~~~~~~~~~~~~~~~D~~~~~~~~~~~~~~~~~-~~   85 (264)
T PRK12829          9 LDGLRVLVTGGASGIGRAIAEAF-AEAGA-RVHVCDVSEAALAATAARLPGAKVTATVADVADPAQVERVFDTAVER-FG   85 (264)
T ss_pred             cCCCEEEEeCCCCcHHHHHHHHH-HHCCC-EEEEEeCCHHHHHHHHHHHhcCceEEEEccCCCHHHHHHHHHHHHHH-hC
Confidence            46789999987 99999999945 45698 477777776655433 333221  22222222 22222233333222 25


Q ss_pred             CceEEEeCCCC
Q 017868          255 GIDVSFDCAGL  265 (365)
Q Consensus       255 ~~d~vid~~g~  265 (365)
                      ++|.||.+.|.
T Consensus        86 ~~d~vi~~ag~   96 (264)
T PRK12829         86 GLDVLVNNAGI   96 (264)
T ss_pred             CCCEEEECCCC
Confidence            79999998874

>PF01262 AlaDh_PNT_C: Alanine dehydrogenase/PNT, C-terminal domain; InterPro: IPR007698 Alanine dehydrogenases (1

Probab=95.50  E-value=0.14  Score=41.71  Aligned_cols=99  Identities=16%  Similarity=0.219  Sum_probs=63.6

Q ss_pred             CCEEEEEcCCHHHHHHHHHHHHHCCCCeEEEEeCChhHHHHHHHcCCCEEEeC-CCC--------------cccHHHHHH
Q 017868          182 ETNVLIMGAGPIGLVTMLGAPRAFGAPRIVIVDVDDYRLSVAKEIGADNIVKV-STN--------------LQDIAEEVE  246 (365)
Q Consensus       182 g~~vlI~G~g~~G~~ai~~l~~~~g~~~vi~v~~~~~~~~~~~~~g~~~~~~~-~~~--------------~~~~~~~i~  246 (365)
                      .-+|+|+|+|.+|+.|+. +++.+|+ .++..+...++.+..+.++...+... ...              .+.+...+.
T Consensus        20 p~~vvv~G~G~vg~gA~~-~~~~lGa-~v~~~d~~~~~~~~~~~~~~~~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~f~   97 (168)
T PF01262_consen   20 PAKVVVTGAGRVGQGAAE-IAKGLGA-EVVVPDERPERLRQLESLGAYFIEVDYEDHLERKDFDKADYYEHPESYESNFA   97 (168)
T ss_dssp             T-EEEEESTSHHHHHHHH-HHHHTT--EEEEEESSHHHHHHHHHTTTEESEETTTTTTTSB-CCHHHCHHHCCHHHHHHH
T ss_pred             CeEEEEECCCHHHHHHHH-HHhHCCC-EEEeccCCHHHHHhhhcccCceEEEcccccccccccchhhhhHHHHHhHHHHH
Confidence            368999999999999999 8899999 58888888888888888887554331 110              133333444


Q ss_pred             HHHHHhCCCceEEEeCCC---C--HH-HHHHHHHhcccCCEEEEEc
Q 017868          247 KIQKAMGTGIDVSFDCAG---L--NK-TMSTALGATCAGGKVCLVG  286 (365)
Q Consensus       247 ~~~~~~~~~~d~vid~~g---~--~~-~~~~~~~~l~~~G~~~~~g  286 (365)
                      +..    ..+|++|.+.-   .  +. .....++.|+++..++.++
T Consensus        98 ~~i----~~~d~vI~~~~~~~~~~P~lvt~~~~~~m~~gsvIvDis  139 (168)
T PF01262_consen   98 EFI----APADIVIGNGLYWGKRAPRLVTEEMVKSMKPGSVIVDIS  139 (168)
T ss_dssp             HHH----HH-SEEEEHHHBTTSS---SBEHHHHHTSSTTEEEEETT
T ss_pred             HHH----hhCcEEeeecccCCCCCCEEEEhHHhhccCCCceEEEEE
Confidence            332    35788885321   1  11 1125667788888888775

4.1.1 from EC) and pyridine nucleotide transhydrogenase (1.6.1.1 from EC) have been shown to share regions of similarity []. Alanine dehydrogenase catalyzes the NAD-dependent reversible reductive amination of pyruvate into alanine. Pyridine nucleotide transhydrogenase catalyzes the reduction of NADP+ to NADPH with the concomitant oxidation of NADH to NAD+. This enzyme is located in the plasma membrane of prokaryotes and in the inner membrane of the mitochondria of eukaryotes. The transhydrogenation between NADH and NADP is coupled with the translocation of a proton across the membrane. In prokaryotes the enzyme is composed of two different subunits, an alpha chain (gene pntA) and a beta chain (gene pntB), while in eukaryotes it is a single chain protein. The sequence of alanine dehydrogenase from several bacterial species are related with those of the alpha subunit of bacterial pyridine nucleotide transhydrogenase and of the N-terminal half of the eukaryotic enzyme. The two most conserved regions correspond respectively to the N-terminal extremity of these proteins and to a central glycine-rich region which is part of the NAD(H)-binding site. This is a C-terminal domain of alanine dehydrogenases (1.4.1.1 from EC). This domain is also found in the lysine 2-oxoglutarate reductases. ; GO: 0016491 oxidoreductase activity, 0055114 oxidation-reduction process; PDB: 1KOL_A 2EEZ_F 1L7E_C 1PTJ_B 1NM5_A 1HZZ_B 1U2G_B 2FSV_A 2FR8_A 1U2D_A ....

>PRK00811 spermidine synthase; Provisional

Probab=95.48  E-value=0.11  Score=46.31  Aligned_cols=98  Identities=18%  Similarity=0.147  Sum_probs=62.7

Q ss_pred             CCCCEEEEEcCCHHHHHHHHHHHHHCCCCeEEEEeCChhHHHHHHHcC------C---CEEEeCCCCcccHHHHHHHHHH
Q 017868          180 GPETNVLIMGAGPIGLVTMLGAPRAFGAPRIVIVDVDDYRLSVAKEIG------A---DNIVKVSTNLQDIAEEVEKIQK  250 (365)
Q Consensus       180 ~~g~~vlI~G~g~~G~~ai~~l~~~~g~~~vi~v~~~~~~~~~~~~~g------~---~~~~~~~~~~~~~~~~i~~~~~  250 (365)
                      ...++||+.|+|. |..+.. +++..+..+|.+++.+++-.+.++++-      .   ..+....   .|....++.   
T Consensus        75 ~~p~~VL~iG~G~-G~~~~~-~l~~~~~~~V~~VEid~~vv~~a~~~~~~~~~~~~~d~rv~v~~---~Da~~~l~~---  146 (283)
T PRK00811         75 PNPKRVLIIGGGD-GGTLRE-VLKHPSVEKITLVEIDERVVEVCRKYLPEIAGGAYDDPRVELVI---GDGIKFVAE---  146 (283)
T ss_pred             CCCCEEEEEecCc-hHHHHH-HHcCCCCCEEEEEeCCHHHHHHHHHHhHHhccccccCCceEEEE---CchHHHHhh---
Confidence            3567999998865 666666 666667778999999998888876631      1   1111111   232233322   


Q ss_pred             HhCCCceEEEeCCCC----------HHHHHHHHHhcccCCEEEEEc
Q 017868          251 AMGTGIDVSFDCAGL----------NKTMSTALGATCAGGKVCLVG  286 (365)
Q Consensus       251 ~~~~~~d~vid~~g~----------~~~~~~~~~~l~~~G~~~~~g  286 (365)
                       ..+.+|+||--...          ...+..+.++|+++|.++...
T Consensus       147 -~~~~yDvIi~D~~dp~~~~~~l~t~ef~~~~~~~L~~gGvlv~~~  191 (283)
T PRK00811        147 -TENSFDVIIVDSTDPVGPAEGLFTKEFYENCKRALKEDGIFVAQS  191 (283)
T ss_pred             -CCCcccEEEECCCCCCCchhhhhHHHHHHHHHHhcCCCcEEEEeC
Confidence             25689999863311          223457788999999998763

>PRK06500 short chain dehydrogenase; Provisional

Probab=95.46  E-value=0.16  Score=43.97  Aligned_cols=82  Identities=26%  Similarity=0.338  Sum_probs=49.6

Q ss_pred             CCCEEEEEcC-CHHHHHHHHHHHHHCCCCeEEEEeCChhHHH-HHHHcCCCEE-EeCCC-CcccHHHHHHHHHHHhCCCc
Q 017868          181 PETNVLIMGA-GPIGLVTMLGAPRAFGAPRIVIVDVDDYRLS-VAKEIGADNI-VKVST-NLQDIAEEVEKIQKAMGTGI  256 (365)
Q Consensus       181 ~g~~vlI~G~-g~~G~~ai~~l~~~~g~~~vi~v~~~~~~~~-~~~~~g~~~~-~~~~~-~~~~~~~~i~~~~~~~~~~~  256 (365)
                      ++.++||+|+ |.+|.++++.+ ...|+ .++.+++++++.+ ..++++.... +..+- +..+....+..+.+. .+++
T Consensus         5 ~~k~vlItGasg~iG~~la~~l-~~~g~-~v~~~~r~~~~~~~~~~~~~~~~~~~~~D~~~~~~~~~~~~~~~~~-~~~i   81 (249)
T PRK06500          5 QGKTALITGGTSGIGLETARQF-LAEGA-RVAITGRDPASLEAARAELGESALVIRADAGDVAAQKALAQALAEA-FGRL   81 (249)
T ss_pred             CCCEEEEeCCCchHHHHHHHHH-HHCCC-EEEEecCCHHHHHHHHHHhCCceEEEEecCCCHHHHHHHHHHHHHH-hCCC
Confidence            4678999987 99999999945 45698 5777777766544 3455654321 22221 112222233333222 3579


Q ss_pred             eEEEeCCCC
Q 017868          257 DVSFDCAGL  265 (365)
Q Consensus       257 d~vid~~g~  265 (365)
                      |++|.++|.
T Consensus        82 d~vi~~ag~   90 (249)
T PRK06500         82 DAVFINAGV   90 (249)
T ss_pred             CEEEECCCC
Confidence            999998873

>PRK12549 shikimate 5-dehydrogenase; Reviewed

Probab=95.46  E-value=0.1  Score=46.52  Aligned_cols=46  Identities=33%  Similarity=0.455  Sum_probs=37.1

Q ss_pred             CCCCEEEEEcCCHHHHHHHHHHHHHCCCCeEEEEeCChhHHHH-HHHc
Q 017868          180 GPETNVLIMGAGPIGLVTMLGAPRAFGAPRIVIVDVDDYRLSV-AKEI  226 (365)
Q Consensus       180 ~~g~~vlI~G~g~~G~~ai~~l~~~~g~~~vi~v~~~~~~~~~-~~~~  226 (365)
                      ..+.+|+|.|+|+.|.+++. .+...|++.+..++++.+|.+. ++.+
T Consensus       125 ~~~k~vlIlGaGGaaraia~-aL~~~G~~~I~I~nR~~~ka~~la~~l  171 (284)
T PRK12549        125 ASLERVVQLGAGGAGAAVAH-ALLTLGVERLTIFDVDPARAAALADEL  171 (284)
T ss_pred             ccCCEEEEECCcHHHHHHHH-HHHHcCCCEEEEECCCHHHHHHHHHHH
Confidence            35678999999999999999 6667899889999998887664 3444

>COG1179 Dinucleotide-utilizing enzymes involved in molybdopterin and thiamine biosynthesis family 1 [Coenzyme metabolism]

Probab=95.46  E-value=0.074  Score=45.09  Aligned_cols=36  Identities=31%  Similarity=0.513  Sum_probs=29.4

Q ss_pred             CCCEEEEEcCCHHHHHHHHHHHHHCCCCeEEEEeCCh
Q 017868          181 PETNVLIMGAGPIGLVTMLGAPRAFGAPRIVIVDVDD  217 (365)
Q Consensus       181 ~g~~vlI~G~g~~G~~ai~~l~~~~g~~~vi~v~~~~  217 (365)
                      +..+|+|.|.|++|.+++. .+.+.|+.++..+|-++
T Consensus        29 ~~~~V~VvGiGGVGSw~ve-ALaRsGig~itlID~D~   64 (263)
T COG1179          29 KQAHVCVVGIGGVGSWAVE-ALARSGIGRITLIDMDD   64 (263)
T ss_pred             hhCcEEEEecCchhHHHHH-HHHHcCCCeEEEEeccc
Confidence            4578999999999999999 55567999888886543

>PRK03369 murD UDP-N-acetylmuramoyl-L-alanyl-D-glutamate synthetase; Provisional

Probab=95.45  E-value=0.094  Score=50.64  Aligned_cols=73  Identities=27%  Similarity=0.418  Sum_probs=51.5

Q ss_pred             CCCCCEEEEEcCCHHHHHHHHHHHHHCCCCeEEEEeCChhHHHHHHHcCCCEEEeCCCCcccHHHHHHHHHHHhCCCceE
Q 017868          179 IGPETNVLIMGAGPIGLVTMLGAPRAFGAPRIVIVDVDDYRLSVAKEIGADNIVKVSTNLQDIAEEVEKIQKAMGTGIDV  258 (365)
Q Consensus       179 ~~~g~~vlI~G~g~~G~~ai~~l~~~~g~~~vi~v~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~i~~~~~~~~~~~d~  258 (365)
                      +.++++|+|+|.|..|++++. +++..|+ .|++.+..+.+.+.++++|+.. +.. .   ...+.+        ..+|+
T Consensus         9 ~~~~~~v~V~G~G~sG~aa~~-~L~~~G~-~v~~~D~~~~~~~~l~~~g~~~-~~~-~---~~~~~l--------~~~D~   73 (488)
T PRK03369          9 LLPGAPVLVAGAGVTGRAVLA-ALTRFGA-RPTVCDDDPDALRPHAERGVAT-VST-S---DAVQQI--------ADYAL   73 (488)
T ss_pred             ccCCCeEEEEcCCHHHHHHHH-HHHHCCC-EEEEEcCCHHHHHHHHhCCCEE-EcC-c---chHhHh--------hcCCE
Confidence            557899999999999999999 7888899 5777887766666667777643 211 1   111111        35799


Q ss_pred             EEeCCCCH
Q 017868          259 SFDCAGLN  266 (365)
Q Consensus       259 vid~~g~~  266 (365)
                      |+.+.|.+
T Consensus        74 VV~SpGi~   81 (488)
T PRK03369         74 VVTSPGFR   81 (488)
T ss_pred             EEECCCCC
Confidence            99988854

>PRK06718 precorrin-2 dehydrogenase; Reviewed

Probab=95.45  E-value=0.47  Score=39.91  Aligned_cols=89  Identities=12%  Similarity=0.191  Sum_probs=49.3

Q ss_pred             CCCEEEEEcCCHHHHHHHHHHHHHCCCCeEEEEeCCh-hH-HHHHHHcCCCEEEeCCCCcccHHHHHHHHHHHhCCCceE
Q 017868          181 PETNVLIMGAGPIGLVTMLGAPRAFGAPRIVIVDVDD-YR-LSVAKEIGADNIVKVSTNLQDIAEEVEKIQKAMGTGIDV  258 (365)
Q Consensus       181 ~g~~vlI~G~g~~G~~ai~~l~~~~g~~~vi~v~~~~-~~-~~~~~~~g~~~~~~~~~~~~~~~~~i~~~~~~~~~~~d~  258 (365)
                      .|.+|||.|+|.+|...+. .+...|+ .|.+++... +. .+++.. +..   .+...  .+..       ..-.++|+
T Consensus         9 ~~k~vLVIGgG~va~~ka~-~Ll~~ga-~V~VIs~~~~~~l~~l~~~-~~i---~~~~~--~~~~-------~~l~~adl   73 (202)
T PRK06718          9 SNKRVVIVGGGKVAGRRAI-TLLKYGA-HIVVISPELTENLVKLVEE-GKI---RWKQK--EFEP-------SDIVDAFL   73 (202)
T ss_pred             CCCEEEEECCCHHHHHHHH-HHHHCCC-eEEEEcCCCCHHHHHHHhC-CCE---EEEec--CCCh-------hhcCCceE
Confidence            5679999999999999888 4455688 455554332 12 223222 211   11111  1110       01257899


Q ss_pred             EEeCCCCHHHHHHHHHhcccCCEEEEE
Q 017868          259 SFDCAGLNKTMSTALGATCAGGKVCLV  285 (365)
Q Consensus       259 vid~~g~~~~~~~~~~~l~~~G~~~~~  285 (365)
                      ||-|++.+. ++..+...+..+.++..
T Consensus        74 ViaaT~d~e-lN~~i~~~a~~~~lvn~   99 (202)
T PRK06718         74 VIAATNDPR-VNEQVKEDLPENALFNV   99 (202)
T ss_pred             EEEcCCCHH-HHHHHHHHHHhCCcEEE
Confidence            999999874 44444433344555544

>PRK08628 short chain dehydrogenase; Provisional

Probab=95.45  E-value=0.12  Score=45.06  Aligned_cols=81  Identities=23%  Similarity=0.217  Sum_probs=47.9

Q ss_pred             CCCEEEEEcC-CHHHHHHHHHHHHHCCCCeEEEEeCChhHHHHHHH---cCCC-EEEeCCC-CcccHHHHHHHHHHHhCC
Q 017868          181 PETNVLIMGA-GPIGLVTMLGAPRAFGAPRIVIVDVDDYRLSVAKE---IGAD-NIVKVST-NLQDIAEEVEKIQKAMGT  254 (365)
Q Consensus       181 ~g~~vlI~G~-g~~G~~ai~~l~~~~g~~~vi~v~~~~~~~~~~~~---~g~~-~~~~~~~-~~~~~~~~i~~~~~~~~~  254 (365)
                      ++.++||+|+ |++|..+++.++ ..|++ ++.+.+++++.+..++   .+.. ..+..+- +.+++...+.++.+. .+
T Consensus         6 ~~~~ilItGasggiG~~la~~l~-~~G~~-v~~~~r~~~~~~~~~~~~~~~~~~~~~~~D~~~~~~~~~~~~~~~~~-~~   82 (258)
T PRK08628          6 KDKVVIVTGGASGIGAAISLRLA-EEGAI-PVIFGRSAPDDEFAEELRALQPRAEFVQVDLTDDAQCRDAVEQTVAK-FG   82 (258)
T ss_pred             CCCEEEEeCCCChHHHHHHHHHH-HcCCc-EEEEcCChhhHHHHHHHHhcCCceEEEEccCCCHHHHHHHHHHHHHh-cC
Confidence            4678999987 999999998565 45985 5556666665544333   2322 1222221 122233333333332 35


Q ss_pred             CceEEEeCCC
Q 017868          255 GIDVSFDCAG  264 (365)
Q Consensus       255 ~~d~vid~~g  264 (365)
                      ++|++|.++|
T Consensus        83 ~id~vi~~ag   92 (258)
T PRK08628         83 RIDGLVNNAG   92 (258)
T ss_pred             CCCEEEECCc
Confidence            8999999988

>PRK06180 short chain dehydrogenase; Provisional

Probab=95.45  E-value=0.2  Score=44.35  Aligned_cols=82  Identities=21%  Similarity=0.160  Sum_probs=49.3

Q ss_pred             CCCEEEEEcC-CHHHHHHHHHHHHHCCCCeEEEEeCChhHHHHHHHcCCC--EEEeCCC-CcccHHHHHHHHHHHhCCCc
Q 017868          181 PETNVLIMGA-GPIGLVTMLGAPRAFGAPRIVIVDVDDYRLSVAKEIGAD--NIVKVST-NLQDIAEEVEKIQKAMGTGI  256 (365)
Q Consensus       181 ~g~~vlI~G~-g~~G~~ai~~l~~~~g~~~vi~v~~~~~~~~~~~~~g~~--~~~~~~~-~~~~~~~~i~~~~~~~~~~~  256 (365)
                      .+.++||+|+ |++|.++++.+ ...|+ .|+++++++++.+.+.+....  ..+..+- +.++....++...+. -+++
T Consensus         3 ~~~~vlVtGasggiG~~la~~l-~~~G~-~V~~~~r~~~~~~~l~~~~~~~~~~~~~D~~d~~~~~~~~~~~~~~-~~~~   79 (277)
T PRK06180          3 SMKTWLITGVSSGFGRALAQAA-LAAGH-RVVGTVRSEAARADFEALHPDRALARLLDVTDFDAIDAVVADAEAT-FGPI   79 (277)
T ss_pred             CCCEEEEecCCChHHHHHHHHH-HhCcC-EEEEEeCCHHHHHHHHhhcCCCeeEEEccCCCHHHHHHHHHHHHHH-hCCC
Confidence            3568999987 99999999945 45698 577777877776554443211  1122121 122333333333222 2469


Q ss_pred             eEEEeCCCC
Q 017868          257 DVSFDCAGL  265 (365)
Q Consensus       257 d~vid~~g~  265 (365)
                      |+++.+.|.
T Consensus        80 d~vv~~ag~   88 (277)
T PRK06180         80 DVLVNNAGY   88 (277)
T ss_pred             CEEEECCCc
Confidence            999998874

>PRK07062 short chain dehydrogenase; Provisional

Probab=95.44  E-value=0.17  Score=44.43  Aligned_cols=82  Identities=22%  Similarity=0.298  Sum_probs=48.2

Q ss_pred             CCCEEEEEcC-CHHHHHHHHHHHHHCCCCeEEEEeCChhHHHHH-HH----cCCCEE--EeCCC-CcccHHHHHHHHHHH
Q 017868          181 PETNVLIMGA-GPIGLVTMLGAPRAFGAPRIVIVDVDDYRLSVA-KE----IGADNI--VKVST-NLQDIAEEVEKIQKA  251 (365)
Q Consensus       181 ~g~~vlI~G~-g~~G~~ai~~l~~~~g~~~vi~v~~~~~~~~~~-~~----~g~~~~--~~~~~-~~~~~~~~i~~~~~~  251 (365)
                      .+.++||+|+ +++|.++++.+ ...|+ +|+.+++++++.+.+ ++    .+...+  +..+- +.++..+.+.++.+.
T Consensus         7 ~~k~~lItGas~giG~~ia~~l-~~~G~-~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~~D~~~~~~v~~~~~~~~~~   84 (265)
T PRK07062          7 EGRVAVVTGGSSGIGLATVELL-LEAGA-SVAICGRDEERLASAEARLREKFPGARLLAARCDVLDEADVAAFAAAVEAR   84 (265)
T ss_pred             CCCEEEEeCCCchHHHHHHHHH-HHCCC-eEEEEeCCHHHHHHHHHHHHhhCCCceEEEEEecCCCHHHHHHHHHHHHHh
Confidence            4678999987 89999999944 46699 467777777654322 22    211122  21121 222333333333332


Q ss_pred             hCCCceEEEeCCCC
Q 017868          252 MGTGIDVSFDCAGL  265 (365)
Q Consensus       252 ~~~~~d~vid~~g~  265 (365)
                       -+++|++|.++|.
T Consensus        85 -~g~id~li~~Ag~   97 (265)
T PRK07062         85 -FGGVDMLVNNAGQ   97 (265)
T ss_pred             -cCCCCEEEECCCC
Confidence             3579999999873

>PRK08589 short chain dehydrogenase; Validated

Probab=95.44  E-value=0.18  Score=44.48  Aligned_cols=81  Identities=23%  Similarity=0.346  Sum_probs=47.9

Q ss_pred             CCCEEEEEcC-CHHHHHHHHHHHHHCCCCeEEEEeCChhHHHHHHHc---CCC-EEEeCCC-CcccHHHHHHHHHHHhCC
Q 017868          181 PETNVLIMGA-GPIGLVTMLGAPRAFGAPRIVIVDVDDYRLSVAKEI---GAD-NIVKVST-NLQDIAEEVEKIQKAMGT  254 (365)
Q Consensus       181 ~g~~vlI~G~-g~~G~~ai~~l~~~~g~~~vi~v~~~~~~~~~~~~~---g~~-~~~~~~~-~~~~~~~~i~~~~~~~~~  254 (365)
                      ++.++||+|+ +++|.++++.++ ..|+ +|+.++++++..+.++++   +.. ..+..+- +..+....+.++.+. -+
T Consensus         5 ~~k~vlItGas~gIG~aia~~l~-~~G~-~vi~~~r~~~~~~~~~~~~~~~~~~~~~~~Dl~~~~~~~~~~~~~~~~-~g   81 (272)
T PRK08589          5 ENKVAVITGASTGIGQASAIALA-QEGA-YVLAVDIAEAVSETVDKIKSNGGKAKAYHVDISDEQQVKDFASEIKEQ-FG   81 (272)
T ss_pred             CCCEEEEECCCchHHHHHHHHHH-HCCC-EEEEEeCcHHHHHHHHHHHhcCCeEEEEEeecCCHHHHHHHHHHHHHH-cC
Confidence            4678999987 999999999555 5598 567776764333333333   321 1222221 223333444444332 35


Q ss_pred             CceEEEeCCC
Q 017868          255 GIDVSFDCAG  264 (365)
Q Consensus       255 ~~d~vid~~g  264 (365)
                      ++|++|.++|
T Consensus        82 ~id~li~~Ag   91 (272)
T PRK08589         82 RVDVLFNNAG   91 (272)
T ss_pred             CcCEEEECCC
Confidence            7999999886

>COG2519 GCD14 tRNA(1-methyladenosine) methyltransferase and related methyltransferases [Translation, ribosomal structure and biogenesis]

Probab=95.44  E-value=0.15  Score=43.75  Aligned_cols=104  Identities=23%  Similarity=0.341  Sum_probs=69.4

Q ss_pred             HHhcCCCCCCEEEEEcCCHHHHHHHHHHHHHCCC-CeEEEEeCChhHHHH----HHHcCCCEEEeCCCCcccHHHHHHHH
Q 017868          174 CRRANIGPETNVLIMGAGPIGLVTMLGAPRAFGA-PRIVIVDVDDYRLSV----AKEIGADNIVKVSTNLQDIAEEVEKI  248 (365)
Q Consensus       174 ~~~~~~~~g~~vlI~G~g~~G~~ai~~l~~~~g~-~~vi~v~~~~~~~~~----~~~~g~~~~~~~~~~~~~~~~~i~~~  248 (365)
                      +...++.+|++|+=.|.|+ |.+++- |++..|. .++++.+..++..+.    ++++|....+.+  ...|..+.+   
T Consensus        87 ~~~~gi~pg~rVlEAGtGS-G~lt~~-La~~vg~~G~v~tyE~r~d~~k~A~~Nl~~~~l~d~v~~--~~~Dv~~~~---  159 (256)
T COG2519          87 VARLGISPGSRVLEAGTGS-GALTAY-LARAVGPEGHVTTYEIREDFAKTARENLSEFGLGDRVTL--KLGDVREGI---  159 (256)
T ss_pred             HHHcCCCCCCEEEEcccCc-hHHHHH-HHHhhCCCceEEEEEecHHHHHHHHHHHHHhccccceEE--Eeccccccc---
Confidence            4567899999999988754 767777 7776665 588999888876554    455555442221  112222211   


Q ss_pred             HHHhCCCceEE-EeCCCCHHHHHHHHHhcccCCEEEEEcc
Q 017868          249 QKAMGTGIDVS-FDCAGLNKTMSTALGATCAGGKVCLVGM  287 (365)
Q Consensus       249 ~~~~~~~~d~v-id~~g~~~~~~~~~~~l~~~G~~~~~g~  287 (365)
                         .+..+|.+ +|--.....++++.+.|+++|.++.+..
T Consensus       160 ---~~~~vDav~LDmp~PW~~le~~~~~Lkpgg~~~~y~P  196 (256)
T COG2519         160 ---DEEDVDAVFLDLPDPWNVLEHVSDALKPGGVVVVYSP  196 (256)
T ss_pred             ---cccccCEEEEcCCChHHHHHHHHHHhCCCcEEEEEcC
Confidence               13478876 4554555688899999999999999854

>PRK08415 enoyl-(acyl carrier protein) reductase; Provisional

Probab=95.43  E-value=0.21  Score=44.26  Aligned_cols=82  Identities=18%  Similarity=0.282  Sum_probs=48.5

Q ss_pred             CCCEEEEEcC---CHHHHHHHHHHHHHCCCCeEEEEeCChh---HHH-HHHHcCCCEEEeCCC-CcccHHHHHHHHHHHh
Q 017868          181 PETNVLIMGA---GPIGLVTMLGAPRAFGAPRIVIVDVDDY---RLS-VAKEIGADNIVKVST-NLQDIAEEVEKIQKAM  252 (365)
Q Consensus       181 ~g~~vlI~G~---g~~G~~ai~~l~~~~g~~~vi~v~~~~~---~~~-~~~~~g~~~~~~~~~-~~~~~~~~i~~~~~~~  252 (365)
                      .++++||+|+   +++|.++++.++ ..|+ +|+.+.++++   +.+ ..++++....+..+- +.++....+.++.+. 
T Consensus         4 ~~k~~lItGas~~~GIG~aiA~~la-~~G~-~Vil~~r~~~~~~~~~~~~~~~~~~~~~~~Dv~d~~~v~~~~~~i~~~-   80 (274)
T PRK08415          4 KGKKGLIVGVANNKSIAYGIAKACF-EQGA-ELAFTYLNEALKKRVEPIAQELGSDYVYELDVSKPEHFKSLAESLKKD-   80 (274)
T ss_pred             CCcEEEEECCCCCCCHHHHHHHHHH-HCCC-EEEEEecCHHHHHHHHHHHHhcCCceEEEecCCCHHHHHHHHHHHHHH-
Confidence            4678999986   489999999555 5699 4666666542   222 334455433232222 223344444444332 


Q ss_pred             CCCceEEEeCCCC
Q 017868          253 GTGIDVSFDCAGL  265 (365)
Q Consensus       253 ~~~~d~vid~~g~  265 (365)
                      .+.+|++|.++|.
T Consensus        81 ~g~iDilVnnAG~   93 (274)
T PRK08415         81 LGKIDFIVHSVAF   93 (274)
T ss_pred             cCCCCEEEECCcc
Confidence            3579999998873

>PF01118 Semialdhyde_dh: Semialdehyde dehydrogenase, NAD binding domain; InterPro: IPR000534 The semialdehyde dehydrogenase family is found in N-acetyl-glutamine semialdehyde dehydrogenase (AgrC), which is involved in arginine biosynthesis, and aspartate-semialdehyde dehydrogenase [], an enzyme involved in the biosynthesis of various amino acids from aspartate

Probab=95.42  E-value=0.072  Score=40.75  Aligned_cols=92  Identities=20%  Similarity=0.140  Sum_probs=54.4

Q ss_pred             EEEEEcC-CHHHHHHHHHHHHHCCCCeEEEEeCChhH-HHHHHHcC---CCEEEeCCCCcccHHHHHHHHHHHhCCCceE
Q 017868          184 NVLIMGA-GPIGLVTMLGAPRAFGAPRIVIVDVDDYR-LSVAKEIG---ADNIVKVSTNLQDIAEEVEKIQKAMGTGIDV  258 (365)
Q Consensus       184 ~vlI~G~-g~~G~~ai~~l~~~~g~~~vi~v~~~~~~-~~~~~~~g---~~~~~~~~~~~~~~~~~i~~~~~~~~~~~d~  258 (365)
                      +|.|+|+ |.+|..++.+|+++..++.+..+.++.+. ..+...++   ......+..  .+    ...+     ..+|+
T Consensus         1 rV~IvGAtG~vG~~l~~lL~~hp~~e~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~--~~----~~~~-----~~~Dv   69 (121)
T PF01118_consen    1 RVAIVGATGYVGRELLRLLAEHPDFELVALVSSSRSAGKPLSEVFPHPKGFEDLSVED--AD----PEEL-----SDVDV   69 (121)
T ss_dssp             EEEEESTTSHHHHHHHHHHHHTSTEEEEEEEESTTTTTSBHHHTTGGGTTTEEEBEEE--TS----GHHH-----TTESE
T ss_pred             CEEEECCCCHHHHHHHHHHhcCCCccEEEeeeeccccCCeeehhccccccccceeEee--cc----hhHh-----hcCCE
Confidence            5889996 99999999988887778666666655522 22222222   111121111  11    1111     58999


Q ss_pred             EEeCCCCHHHHHHHHHhcccCCEEEEEc
Q 017868          259 SFDCAGLNKTMSTALGATCAGGKVCLVG  286 (365)
Q Consensus       259 vid~~g~~~~~~~~~~~l~~~G~~~~~g  286 (365)
                      ||.|.+.....+..-..+..+-.++..+
T Consensus        70 vf~a~~~~~~~~~~~~~~~~g~~ViD~s   97 (121)
T PF01118_consen   70 VFLALPHGASKELAPKLLKAGIKVIDLS   97 (121)
T ss_dssp             EEE-SCHHHHHHHHHHHHHTTSEEEESS
T ss_pred             EEecCchhHHHHHHHHHhhCCcEEEeCC
Confidence            9999997645444555566666676664

This family is also found in yeast and fungal Arg5,6 protein, which is cleaved into the enzymes N-acety-gamma-glutamyl-phosphate reductase and acetylglutamate kinase. These are also involved in arginine biosynthesis. All proteins in this entry contain a NAD binding region of semialdehyde dehydrogenase.; GO: 0016620 oxidoreductase activity, acting on the aldehyde or oxo group of donors, NAD or NADP as acceptor, 0051287 NAD binding, 0006520 cellular amino acid metabolic process, 0055114 oxidation-reduction process, 0005737 cytoplasm; PDB: 3Q0E_B 1MB4_A 3PZR_A 1MC4_A 3TZ6_A 3VOS_A 2CVO_B 2R00_C 2QZ9_A 2EP5_C ....

>PRK09072 short chain dehydrogenase; Provisional

Probab=95.40  E-value=0.16  Score=44.55  Aligned_cols=81  Identities=23%  Similarity=0.336  Sum_probs=47.4

Q ss_pred             CCCEEEEEcC-CHHHHHHHHHHHHHCCCCeEEEEeCChhHHHHH-HHc--CC-CEEEeCCCCc-ccHHHHHHHHHHHhCC
Q 017868          181 PETNVLIMGA-GPIGLVTMLGAPRAFGAPRIVIVDVDDYRLSVA-KEI--GA-DNIVKVSTNL-QDIAEEVEKIQKAMGT  254 (365)
Q Consensus       181 ~g~~vlI~G~-g~~G~~ai~~l~~~~g~~~vi~v~~~~~~~~~~-~~~--g~-~~~~~~~~~~-~~~~~~i~~~~~~~~~  254 (365)
                      ++.++||+|+ |++|..++..++ ..|+ .|+++++++++.+.+ .++  +. ...+..+-.+ .+.......+.+  .+
T Consensus         4 ~~~~vlItG~s~~iG~~ia~~l~-~~G~-~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~D~~d~~~~~~~~~~~~~--~~   79 (263)
T PRK09072          4 KDKRVLLTGASGGIGQALAEALA-AAGA-RLLLVGRNAEKLEALAARLPYPGRHRWVVADLTSEAGREAVLARARE--MG   79 (263)
T ss_pred             CCCEEEEECCCchHHHHHHHHHH-HCCC-EEEEEECCHHHHHHHHHHHhcCCceEEEEccCCCHHHHHHHHHHHHh--cC
Confidence            4678999987 999999999554 5698 477777777665433 332  21 1122222211 222222222222  35


Q ss_pred             CceEEEeCCCC
Q 017868          255 GIDVSFDCAGL  265 (365)
Q Consensus       255 ~~d~vid~~g~  265 (365)
                      ++|.++.++|.
T Consensus        80 ~id~lv~~ag~   90 (263)
T PRK09072         80 GINVLINNAGV   90 (263)
T ss_pred             CCCEEEECCCC
Confidence            78999998874

>PRK01581 speE spermidine synthase; Validated

Probab=95.39  E-value=0.32  Score=44.48  Aligned_cols=98  Identities=16%  Similarity=0.116  Sum_probs=63.1

Q ss_pred             CCCCEEEEEcCCHHHHHHHHHHHHHCCCCeEEEEeCChhHHHHHHHcC-----------CCEEEeCCCCcccHHHHHHHH
Q 017868          180 GPETNVLIMGAGPIGLVTMLGAPRAFGAPRIVIVDVDDYRLSVAKEIG-----------ADNIVKVSTNLQDIAEEVEKI  248 (365)
Q Consensus       180 ~~g~~vlI~G~g~~G~~ai~~l~~~~g~~~vi~v~~~~~~~~~~~~~g-----------~~~~~~~~~~~~~~~~~i~~~  248 (365)
                      ....+|||.|+|. |.++.. +++..+..+|.+++.+++-.+.++++.           .+.+....   .|..+.++. 
T Consensus       149 ~~PkrVLIIGgGd-G~tlre-lLk~~~v~~It~VEIDpeVIelAr~~~~L~~~~~~~~~DpRV~vvi---~Da~~fL~~-  222 (374)
T PRK01581        149 IDPKRVLILGGGD-GLALRE-VLKYETVLHVDLVDLDGSMINMARNVPELVSLNKSAFFDNRVNVHV---CDAKEFLSS-  222 (374)
T ss_pred             CCCCEEEEECCCH-HHHHHH-HHhcCCCCeEEEEeCCHHHHHHHHhccccchhccccCCCCceEEEE---CcHHHHHHh-
Confidence            4446999998763 666666 666666678999999999999888631           11111111   233333332 


Q ss_pred             HHHhCCCceEEEeCCCC-----------HHHHHHHHHhcccCCEEEEEc
Q 017868          249 QKAMGTGIDVSFDCAGL-----------NKTMSTALGATCAGGKVCLVG  286 (365)
Q Consensus       249 ~~~~~~~~d~vid~~g~-----------~~~~~~~~~~l~~~G~~~~~g  286 (365)
                         ....+|+||--...           .+.+..+.+.|+++|.++...
T Consensus       223 ---~~~~YDVIIvDl~DP~~~~~~~LyT~EFy~~~~~~LkPgGV~V~Qs  268 (374)
T PRK01581        223 ---PSSLYDVIIIDFPDPATELLSTLYTSELFARIATFLTEDGAFVCQS  268 (374)
T ss_pred             ---cCCCccEEEEcCCCccccchhhhhHHHHHHHHHHhcCCCcEEEEec
Confidence               25689999764321           224567888999999988764

>PRK04148 hypothetical protein; Provisional

Probab=95.38  E-value=0.46  Score=36.83  Aligned_cols=93  Identities=13%  Similarity=0.192  Sum_probs=61.1

Q ss_pred             CCCCEEEEEcCCHHHHHHHHHHHHHCCCCeEEEEeCChhHHHHHHHcCCCEEEeCCCCcccHHHHHHHHHHHhCCCceEE
Q 017868          180 GPETNVLIMGAGPIGLVTMLGAPRAFGAPRIVIVDVDDYRLSVAKEIGADNIVKVSTNLQDIAEEVEKIQKAMGTGIDVS  259 (365)
Q Consensus       180 ~~g~~vlI~G~g~~G~~ai~~l~~~~g~~~vi~v~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~i~~~~~~~~~~~d~v  259 (365)
                      .++.++++.|.| .|...+..|+ ..|. .|+++|.+++..+.+++.+...+.. +--+.+.  .   +    -.++|++
T Consensus        15 ~~~~kileIG~G-fG~~vA~~L~-~~G~-~ViaIDi~~~aV~~a~~~~~~~v~d-Dlf~p~~--~---~----y~~a~li   81 (134)
T PRK04148         15 GKNKKIVELGIG-FYFKVAKKLK-ESGF-DVIVIDINEKAVEKAKKLGLNAFVD-DLFNPNL--E---I----YKNAKLI   81 (134)
T ss_pred             ccCCEEEEEEec-CCHHHHHHHH-HCCC-EEEEEECCHHHHHHHHHhCCeEEEC-cCCCCCH--H---H----HhcCCEE
Confidence            456889999998 7875555254 6698 7999999999999998888755432 1111111  1   1    3689999


Q ss_pred             EeCCCCHHHHHHHHHhcccC-CEEEEE
Q 017868          260 FDCAGLNKTMSTALGATCAG-GKVCLV  285 (365)
Q Consensus       260 id~~g~~~~~~~~~~~l~~~-G~~~~~  285 (365)
                      ...--.++.....++.-+.- ..+++.
T Consensus        82 ysirpp~el~~~~~~la~~~~~~~~i~  108 (134)
T PRK04148         82 YSIRPPRDLQPFILELAKKINVPLIIK  108 (134)
T ss_pred             EEeCCCHHHHHHHHHHHHHcCCCEEEE
Confidence            99887776665555544433 334443

>PRK00312 pcm protein-L-isoaspartate O-methyltransferase; Reviewed

Probab=95.35  E-value=0.36  Score=40.92  Aligned_cols=100  Identities=17%  Similarity=0.130  Sum_probs=61.0

Q ss_pred             HHhcCCCCCCEEEEEcCCHHHHHHHHHHHHHCCCCeEEEEeCChhHHHHHH----HcCCCEEEeCCCCcccHHHHHHHHH
Q 017868          174 CRRANIGPETNVLIMGAGPIGLVTMLGAPRAFGAPRIVIVDVDDYRLSVAK----EIGADNIVKVSTNLQDIAEEVEKIQ  249 (365)
Q Consensus       174 ~~~~~~~~g~~vlI~G~g~~G~~ai~~l~~~~g~~~vi~v~~~~~~~~~~~----~~g~~~~~~~~~~~~~~~~~i~~~~  249 (365)
                      +...+++++++||-.|+|. |..+.. +++.. . .+++++.+++..+.++    +++...+.....+   ..+.+.   
T Consensus        71 ~~~l~~~~~~~VLeiG~Gs-G~~t~~-la~~~-~-~v~~vd~~~~~~~~a~~~~~~~~~~~v~~~~~d---~~~~~~---  140 (212)
T PRK00312         71 TELLELKPGDRVLEIGTGS-GYQAAV-LAHLV-R-RVFSVERIKTLQWEAKRRLKQLGLHNVSVRHGD---GWKGWP---  140 (212)
T ss_pred             HHhcCCCCCCEEEEECCCc-cHHHHH-HHHHh-C-EEEEEeCCHHHHHHHHHHHHHCCCCceEEEECC---cccCCC---
Confidence            4567788999999998754 444444 55543 3 6899998877665443    3454332111111   101010   


Q ss_pred             HHhCCCceEEEeCCCCHHHHHHHHHhcccCCEEEEE
Q 017868          250 KAMGTGIDVSFDCAGLNKTMSTALGATCAGGKVCLV  285 (365)
Q Consensus       250 ~~~~~~~d~vid~~g~~~~~~~~~~~l~~~G~~~~~  285 (365)
                        ....+|+|+.............+.|+++|.++..
T Consensus       141 --~~~~fD~I~~~~~~~~~~~~l~~~L~~gG~lv~~  174 (212)
T PRK00312        141 --AYAPFDRILVTAAAPEIPRALLEQLKEGGILVAP  174 (212)
T ss_pred             --cCCCcCEEEEccCchhhhHHHHHhcCCCcEEEEE
Confidence              0257999887555444556788899999998764

>PRK12939 short chain dehydrogenase; Provisional

Probab=95.35  E-value=0.23  Score=42.98  Aligned_cols=82  Identities=17%  Similarity=0.162  Sum_probs=47.6

Q ss_pred             CCCEEEEEcC-CHHHHHHHHHHHHHCCCCeEEEEeCChhHHHH-HH---HcCCC-EEEeCCCCc-ccHHHHHHHHHHHhC
Q 017868          181 PETNVLIMGA-GPIGLVTMLGAPRAFGAPRIVIVDVDDYRLSV-AK---EIGAD-NIVKVSTNL-QDIAEEVEKIQKAMG  253 (365)
Q Consensus       181 ~g~~vlI~G~-g~~G~~ai~~l~~~~g~~~vi~v~~~~~~~~~-~~---~~g~~-~~~~~~~~~-~~~~~~i~~~~~~~~  253 (365)
                      ++.++||+|+ |++|..++..+ ...|+ .++.+++++++.+. .+   ..+.. ..+..+-.+ +++.+.+....+. -
T Consensus         6 ~~~~vlItGa~g~iG~~la~~l-~~~G~-~v~~~~r~~~~~~~~~~~~~~~~~~~~~~~~Dl~~~~~~~~~~~~~~~~-~   82 (250)
T PRK12939          6 AGKRALVTGAARGLGAAFAEAL-AEAGA-TVAFNDGLAAEARELAAALEAAGGRAHAIAADLADPASVQRFFDAAAAA-L   82 (250)
T ss_pred             CCCEEEEeCCCChHHHHHHHHH-HHcCC-EEEEEeCCHHHHHHHHHHHHhcCCcEEEEEccCCCHHHHHHHHHHHHHH-c
Confidence            4688999987 99999999945 45698 46667777665432 22   22322 122222221 2222222222221 2


Q ss_pred             CCceEEEeCCCC
Q 017868          254 TGIDVSFDCAGL  265 (365)
Q Consensus       254 ~~~d~vid~~g~  265 (365)
                      +++|++|.++|.
T Consensus        83 ~~id~vi~~ag~   94 (250)
T PRK12939         83 GGLDGLVNNAGI   94 (250)
T ss_pred             CCCCEEEECCCC
Confidence            579999999874

>PRK07231 fabG 3-ketoacyl-(acyl-carrier-protein) reductase; Provisional

Probab=95.35  E-value=0.21  Score=43.28  Aligned_cols=82  Identities=21%  Similarity=0.196  Sum_probs=48.8

Q ss_pred             CCCEEEEEcC-CHHHHHHHHHHHHHCCCCeEEEEeCChhHHHHH-HHcC--CC-EEEeCCC-CcccHHHHHHHHHHHhCC
Q 017868          181 PETNVLIMGA-GPIGLVTMLGAPRAFGAPRIVIVDVDDYRLSVA-KEIG--AD-NIVKVST-NLQDIAEEVEKIQKAMGT  254 (365)
Q Consensus       181 ~g~~vlI~G~-g~~G~~ai~~l~~~~g~~~vi~v~~~~~~~~~~-~~~g--~~-~~~~~~~-~~~~~~~~i~~~~~~~~~  254 (365)
                      .+.++||+|+ |.+|..+++.++ ..|++ |+.+++++++.+.+ ..+.  .. ..+..+- +..++...+++.... ..
T Consensus         4 ~~~~vlItGasg~iG~~l~~~l~-~~G~~-V~~~~r~~~~~~~~~~~~~~~~~~~~~~~D~~~~~~~~~~~~~~~~~-~~   80 (251)
T PRK07231          4 EGKVAIVTGASSGIGEGIARRFA-AEGAR-VVVTDRNEEAAERVAAEILAGGRAIAVAADVSDEADVEAAVAAALER-FG   80 (251)
T ss_pred             CCcEEEEECCCChHHHHHHHHHH-HCCCE-EEEEeCCHHHHHHHHHHHhcCCeEEEEECCCCCHHHHHHHHHHHHHH-hC
Confidence            4568999987 999999999554 55985 77777877665433 3332  11 1222221 223333333333222 35


Q ss_pred             CceEEEeCCCC
Q 017868          255 GIDVSFDCAGL  265 (365)
Q Consensus       255 ~~d~vid~~g~  265 (365)
                      ++|++|.++|.
T Consensus        81 ~~d~vi~~ag~   91 (251)
T PRK07231         81 SVDILVNNAGT   91 (251)
T ss_pred             CCCEEEECCCC
Confidence            79999998874

>PRK06603 enoyl-(acyl carrier protein) reductase; Provisional

Probab=95.34  E-value=0.2  Score=43.91  Aligned_cols=81  Identities=19%  Similarity=0.213  Sum_probs=46.1

Q ss_pred             CCCEEEEEcC-C--HHHHHHHHHHHHHCCCCeEEEEeCChhHHH----HHHHcCCCEEEeCCC-CcccHHHHHHHHHHHh
Q 017868          181 PETNVLIMGA-G--PIGLVTMLGAPRAFGAPRIVIVDVDDYRLS----VAKEIGADNIVKVST-NLQDIAEEVEKIQKAM  252 (365)
Q Consensus       181 ~g~~vlI~G~-g--~~G~~ai~~l~~~~g~~~vi~v~~~~~~~~----~~~~~g~~~~~~~~~-~~~~~~~~i~~~~~~~  252 (365)
                      .|.++||+|+ +  ++|.++++.++ ..|++ |+.+.++++..+    +.++.+....+..+- +.++....++++.+. 
T Consensus         7 ~~k~~lITGas~~~GIG~a~a~~la-~~G~~-v~~~~r~~~~~~~~~~l~~~~g~~~~~~~Dv~~~~~v~~~~~~~~~~-   83 (260)
T PRK06603          7 QGKKGLITGIANNMSISWAIAQLAK-KHGAE-LWFTYQSEVLEKRVKPLAEEIGCNFVSELDVTNPKSISNLFDDIKEK-   83 (260)
T ss_pred             CCcEEEEECCCCCcchHHHHHHHHH-HcCCE-EEEEeCchHHHHHHHHHHHhcCCceEEEccCCCHHHHHHHHHHHHHH-
Confidence            5678999987 4  79999988454 56995 555555532222    223334333222222 223444444444332 


Q ss_pred             CCCceEEEeCCC
Q 017868          253 GTGIDVSFDCAG  264 (365)
Q Consensus       253 ~~~~d~vid~~g  264 (365)
                      -+.+|+++.++|
T Consensus        84 ~g~iDilVnnag   95 (260)
T PRK06603         84 WGSFDFLLHGMA   95 (260)
T ss_pred             cCCccEEEEccc
Confidence            257999999876

>PRK08317 hypothetical protein; Provisional

Probab=95.32  E-value=0.21  Score=42.98  Aligned_cols=103  Identities=22%  Similarity=0.299  Sum_probs=66.4

Q ss_pred             HHhcCCCCCCEEEEEcCCHHHHHHHHHHHHHCC-CCeEEEEeCChhHHHHHHHc--C-CCEEEeCCCCcccHHHHHHHHH
Q 017868          174 CRRANIGPETNVLIMGAGPIGLVTMLGAPRAFG-APRIVIVDVDDYRLSVAKEI--G-ADNIVKVSTNLQDIAEEVEKIQ  249 (365)
Q Consensus       174 ~~~~~~~~g~~vlI~G~g~~G~~ai~~l~~~~g-~~~vi~v~~~~~~~~~~~~~--g-~~~~~~~~~~~~~~~~~i~~~~  249 (365)
                      ++...+.++++||-.|+|. |..+.. +++..+ ...+++++.+++..+.+++.  . ...+.....+..++.       
T Consensus        12 ~~~~~~~~~~~vLdiG~G~-G~~~~~-~a~~~~~~~~v~~~d~~~~~~~~a~~~~~~~~~~~~~~~~d~~~~~-------   82 (241)
T PRK08317         12 FELLAVQPGDRVLDVGCGP-GNDARE-LARRVGPEGRVVGIDRSEAMLALAKERAAGLGPNVEFVRGDADGLP-------   82 (241)
T ss_pred             HHHcCCCCCCEEEEeCCCC-CHHHHH-HHHhcCCCcEEEEEeCCHHHHHHHHHHhhCCCCceEEEecccccCC-------
Confidence            3567788999999999865 777777 766653 34799999999888777664  1 111111001111110       


Q ss_pred             HHhCCCceEEEeCC------CCHHHHHHHHHhcccCCEEEEEc
Q 017868          250 KAMGTGIDVSFDCA------GLNKTMSTALGATCAGGKVCLVG  286 (365)
Q Consensus       250 ~~~~~~~d~vid~~------g~~~~~~~~~~~l~~~G~~~~~g  286 (365)
                       .....+|+|+...      .....+..+.++|+++|.+++..
T Consensus        83 -~~~~~~D~v~~~~~~~~~~~~~~~l~~~~~~L~~gG~l~~~~  124 (241)
T PRK08317         83 -FPDGSFDAVRSDRVLQHLEDPARALAEIARVLRPGGRVVVLD  124 (241)
T ss_pred             -CCCCCceEEEEechhhccCCHHHHHHHHHHHhcCCcEEEEEe
Confidence             1135789887632      12346678889999999998764

>PRK06198 short chain dehydrogenase; Provisional

Probab=95.32  E-value=0.23  Score=43.38  Aligned_cols=83  Identities=20%  Similarity=0.254  Sum_probs=49.0

Q ss_pred             CCCEEEEEcC-CHHHHHHHHHHHHHCCCCeEEEEeCChhHHH----HHHHcCCCE-EEeCCCC-cccHHHHHHHHHHHhC
Q 017868          181 PETNVLIMGA-GPIGLVTMLGAPRAFGAPRIVIVDVDDYRLS----VAKEIGADN-IVKVSTN-LQDIAEEVEKIQKAMG  253 (365)
Q Consensus       181 ~g~~vlI~G~-g~~G~~ai~~l~~~~g~~~vi~v~~~~~~~~----~~~~~g~~~-~~~~~~~-~~~~~~~i~~~~~~~~  253 (365)
                      .+.+++|+|+ |++|..+++.+ ...|++.|+.+++++++..    .+++.+... .+..+-. .+++.+.+....+. -
T Consensus         5 ~~k~vlItGa~g~iG~~la~~l-~~~G~~~V~~~~r~~~~~~~~~~~l~~~~~~~~~~~~D~~~~~~~~~~~~~~~~~-~   82 (260)
T PRK06198          5 DGKVALVTGGTQGLGAAIARAF-AERGAAGLVICGRNAEKGEAQAAELEALGAKAVFVQADLSDVEDCRRVVAAADEA-F   82 (260)
T ss_pred             CCcEEEEeCCCchHHHHHHHHH-HHCCCCeEEEEcCCHHHHHHHHHHHHhcCCeEEEEEccCCCHHHHHHHHHHHHHH-h
Confidence            5678999987 99999999944 5669965777877765443    223334322 1222222 22233333333222 2


Q ss_pred             CCceEEEeCCCC
Q 017868          254 TGIDVSFDCAGL  265 (365)
Q Consensus       254 ~~~d~vid~~g~  265 (365)
                      +++|++|.+.|.
T Consensus        83 g~id~li~~ag~   94 (260)
T PRK06198         83 GRLDALVNAAGL   94 (260)
T ss_pred             CCCCEEEECCCc
Confidence            479999999874

>PF00670 AdoHcyase_NAD: S-adenosyl-L-homocysteine hydrolase, NAD binding domain; InterPro: IPR015878 S-adenosyl-L-homocysteine hydrolase (3

Probab=95.31  E-value=0.27  Score=39.34  Aligned_cols=93  Identities=19%  Similarity=0.245  Sum_probs=58.7

Q ss_pred             CCCCCCEEEEEcCCHHHHHHHHHHHHHCCCCeEEEEeCChhHHHHHHHcCCCEEEeCCCCcccHHHHHHHHHHHhCCCce
Q 017868          178 NIGPETNVLIMGAGPIGLVTMLGAPRAFGAPRIVIVDVDDYRLSVAKEIGADNIVKVSTNLQDIAEEVEKIQKAMGTGID  257 (365)
Q Consensus       178 ~~~~g~~vlI~G~g~~G~~ai~~l~~~~g~~~vi~v~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~i~~~~~~~~~~~d  257 (365)
                      ..-.|.+++|.|=|.+|.-.++ .++.+|+ +|++++.++.+.-.+..-|... .       .    +.+.    -...|
T Consensus        19 ~~l~Gk~vvV~GYG~vG~g~A~-~lr~~Ga-~V~V~e~DPi~alqA~~dGf~v-~-------~----~~~a----~~~ad   80 (162)
T PF00670_consen   19 LMLAGKRVVVIGYGKVGKGIAR-ALRGLGA-RVTVTEIDPIRALQAAMDGFEV-M-------T----LEEA----LRDAD   80 (162)
T ss_dssp             S--TTSEEEEE--SHHHHHHHH-HHHHTT--EEEEE-SSHHHHHHHHHTT-EE-E------------HHHH----TTT-S
T ss_pred             eeeCCCEEEEeCCCcccHHHHH-HHhhCCC-EEEEEECChHHHHHhhhcCcEe-c-------C----HHHH----HhhCC
Confidence            3468899999999999999999 8899999 7888888887765555545432 1       1    2222    25789


Q ss_pred             EEEeCCCCHHH-HHHHHHhcccCCEEEEEccC
Q 017868          258 VSFDCAGLNKT-MSTALGATCAGGKVCLVGMG  288 (365)
Q Consensus       258 ~vid~~g~~~~-~~~~~~~l~~~G~~~~~g~~  288 (365)
                      ++|.++|.... -..-+..|+++..+...|..
T Consensus        81 i~vtaTG~~~vi~~e~~~~mkdgail~n~Gh~  112 (162)
T PF00670_consen   81 IFVTATGNKDVITGEHFRQMKDGAILANAGHF  112 (162)
T ss_dssp             EEEE-SSSSSSB-HHHHHHS-TTEEEEESSSS
T ss_pred             EEEECCCCccccCHHHHHHhcCCeEEeccCcC
Confidence            99999997643 24667788877776666543

3.1.1 from EC) (AdoHcyase) is an enzyme of the activated methyl cycle, responsible for the reversible hydration of S-adenosyl-L-homocysteine into adenosine and homocysteine. AdoHcyase is an ubiquitous enzyme which binds and requires NAD+ as a cofactor. AdoHcyase is a highly conserved protein [] of about 430 to 470 amino acids. This entry represents the glycine-rich region in the central part of AdoHcyase, which is thought to be involved in NAD-binding.; GO: 0004013 adenosylhomocysteinase activity; PDB: 2ZJ1_C 3DHY_B 2ZIZ_C 2ZJ0_D 3CE6_B 3GLQ_B 3D64_A 3G1U_C 1A7A_A 3NJ4_C ....

>PRK07453 protochlorophyllide oxidoreductase; Validated

Probab=95.28  E-value=0.23  Score=45.11  Aligned_cols=81  Identities=20%  Similarity=0.345  Sum_probs=47.9

Q ss_pred             CCCEEEEEcC-CHHHHHHHHHHHHHCCCCeEEEEeCChhHHH-HHHHcCC---C-EEEeCCC-CcccHHHHHHHHHHHhC
Q 017868          181 PETNVLIMGA-GPIGLVTMLGAPRAFGAPRIVIVDVDDYRLS-VAKEIGA---D-NIVKVST-NLQDIAEEVEKIQKAMG  253 (365)
Q Consensus       181 ~g~~vlI~G~-g~~G~~ai~~l~~~~g~~~vi~v~~~~~~~~-~~~~~g~---~-~~~~~~~-~~~~~~~~i~~~~~~~~  253 (365)
                      .+.++||+|+ |++|..+++.++ ..|+ .|+.++++.++.+ ..+++..   . ..+..+- +..+....+.++.+ ..
T Consensus         5 ~~k~vlVTGas~gIG~~~a~~L~-~~G~-~V~~~~r~~~~~~~~~~~l~~~~~~~~~~~~Dl~~~~~v~~~~~~~~~-~~   81 (322)
T PRK07453          5 AKGTVIITGASSGVGLYAAKALA-KRGW-HVIMACRNLKKAEAAAQELGIPPDSYTIIHIDLGDLDSVRRFVDDFRA-LG   81 (322)
T ss_pred             CCCEEEEEcCCChHHHHHHHHHH-HCCC-EEEEEECCHHHHHHHHHHhhccCCceEEEEecCCCHHHHHHHHHHHHH-hC
Confidence            4678999987 999999999554 5588 5677777776654 3344421   1 1122221 12223333333222 24


Q ss_pred             CCceEEEeCCC
Q 017868          254 TGIDVSFDCAG  264 (365)
Q Consensus       254 ~~~d~vid~~g  264 (365)
                      .++|++|.++|
T Consensus        82 ~~iD~li~nAg   92 (322)
T PRK07453         82 KPLDALVCNAA   92 (322)
T ss_pred             CCccEEEECCc
Confidence            57999999887

>PRK08267 short chain dehydrogenase; Provisional

Probab=95.28  E-value=0.19  Score=43.89  Aligned_cols=81  Identities=26%  Similarity=0.349  Sum_probs=48.1

Q ss_pred             CEEEEEcC-CHHHHHHHHHHHHHCCCCeEEEEeCChhHHHHH-HHcC-C-CEEEeCCC-CcccHHHHHHHHHHHhCCCce
Q 017868          183 TNVLIMGA-GPIGLVTMLGAPRAFGAPRIVIVDVDDYRLSVA-KEIG-A-DNIVKVST-NLQDIAEEVEKIQKAMGTGID  257 (365)
Q Consensus       183 ~~vlI~G~-g~~G~~ai~~l~~~~g~~~vi~v~~~~~~~~~~-~~~g-~-~~~~~~~~-~~~~~~~~i~~~~~~~~~~~d  257 (365)
                      .++||+|+ |.+|..+++.++ ..|+ .|+.++++.++.+.+ +.++ . ...+..+- +..++.+.++.+.+...+++|
T Consensus         2 k~vlItGasg~iG~~la~~l~-~~G~-~V~~~~r~~~~~~~~~~~~~~~~~~~~~~D~~~~~~v~~~~~~~~~~~~~~id   79 (260)
T PRK08267          2 KSIFITGAASGIGRATALLFA-AEGW-RVGAYDINEAGLAALAAELGAGNAWTGALDVTDRAAWDAALADFAAATGGRLD   79 (260)
T ss_pred             cEEEEeCCCchHHHHHHHHHH-HCCC-eEEEEeCCHHHHHHHHHHhcCCceEEEEecCCCHHHHHHHHHHHHHHcCCCCC
Confidence            47899987 999999999555 5598 577777777765543 4333 1 11222222 222333333333222145799


Q ss_pred             EEEeCCCC
Q 017868          258 VSFDCAGL  265 (365)
Q Consensus       258 ~vid~~g~  265 (365)
                      +++.++|.
T Consensus        80 ~vi~~ag~   87 (260)
T PRK08267         80 VLFNNAGI   87 (260)
T ss_pred             EEEECCCC
Confidence            99998874

>cd05311 NAD_bind_2_malic_enz NAD(P) binding domain of malic enzyme (ME), subgroup 2

Probab=95.26  E-value=0.47  Score=40.65  Aligned_cols=91  Identities=24%  Similarity=0.293  Sum_probs=58.1

Q ss_pred             CCCCEEEEEcCCHHHHHHHHHHHHHCCCC--eEEEEeCC----hhH--------HHHHHHcCCCEEEeCCCCcccHHHHH
Q 017868          180 GPETNVLIMGAGPIGLVTMLGAPRAFGAP--RIVIVDVD----DYR--------LSVAKEIGADNIVKVSTNLQDIAEEV  245 (365)
Q Consensus       180 ~~g~~vlI~G~g~~G~~ai~~l~~~~g~~--~vi~v~~~----~~~--------~~~~~~~g~~~~~~~~~~~~~~~~~i  245 (365)
                      -++.+++|.|+|+.|.+++. .+...|++  ++..++++    .+|        .++++.++... .     ..++.+.+
T Consensus        23 l~~~rvlvlGAGgAg~aiA~-~L~~~G~~~~~i~ivdr~gl~~~~r~~~L~~~~~~la~~~~~~~-~-----~~~l~~~l   95 (226)
T cd05311          23 IEEVKIVINGAGAAGIAIAR-LLLAAGAKPENIVVVDSKGVIYEGREDDLNPDKNEIAKETNPEK-T-----GGTLKEAL   95 (226)
T ss_pred             ccCCEEEEECchHHHHHHHH-HHHHcCcCcceEEEEeCCCccccccchhhhHHHHHHHHHhccCc-c-----cCCHHHHH
Confidence            45689999999999999998 55667998  89999887    333        34555544211 0     01222222


Q ss_pred             HHHHHHhCCCceEEEeCCCCHHHH-HHHHHhcccCCEEEEEc
Q 017868          246 EKIQKAMGTGIDVSFDCAGLNKTM-STALGATCAGGKVCLVG  286 (365)
Q Consensus       246 ~~~~~~~~~~~d~vid~~g~~~~~-~~~~~~l~~~G~~~~~g  286 (365)
                              .++|++|.+++.. .+ ...++.+.+...+..+.
T Consensus        96 --------~~~dvlIgaT~~G-~~~~~~l~~m~~~~ivf~ls  128 (226)
T cd05311          96 --------KGADVFIGVSRPG-VVKKEMIKKMAKDPIVFALA  128 (226)
T ss_pred             --------hcCCEEEeCCCCC-CCCHHHHHhhCCCCEEEEeC
Confidence                    2489999998732 32 35566666666555443

Malic enzyme (ME), a member of the amino acid dehydrogenase (DH)-like domain family, catalyzes the oxidative decarboxylation of L-malate to pyruvate in the presence of cations (typically Mg++ or Mn++) with the concomitant reduction of cofactor NAD+ or NADP+. ME has been found in all organisms, and plays important roles in diverse metabolic pathways such as photosynthesis and lipogenesis. This enzyme generally forms homotetramers. The conversion of malate to pyruvate by ME typically involves oxidation of malate to produce oxaloacetate, followed by decarboxylation of oxaloacetate to produce pyruvate and CO2. This subfamily consists primarily of archaeal and bacterial ME. Amino acid DH-like NAD(P)-binding domains are members of the Rossmann fold superfamily and include glutamate, leucine, and phenylalanine DHs, methylene tetrahydrofolate DH, methylene-tetrahydromethanopterin DH, methylene-tetrahydroph

>PRK08265 short chain dehydrogenase; Provisional

Probab=95.24  E-value=0.25  Score=43.32  Aligned_cols=82  Identities=22%  Similarity=0.274  Sum_probs=50.5

Q ss_pred             CCCEEEEEcC-CHHHHHHHHHHHHHCCCCeEEEEeCChhHHH-HHHHcCCCE-EEeCCC-CcccHHHHHHHHHHHhCCCc
Q 017868          181 PETNVLIMGA-GPIGLVTMLGAPRAFGAPRIVIVDVDDYRLS-VAKEIGADN-IVKVST-NLQDIAEEVEKIQKAMGTGI  256 (365)
Q Consensus       181 ~g~~vlI~G~-g~~G~~ai~~l~~~~g~~~vi~v~~~~~~~~-~~~~~g~~~-~~~~~~-~~~~~~~~i~~~~~~~~~~~  256 (365)
                      ++.++||+|+ +++|.+++..++ ..|+ .|+.++++.++.+ +.++++... .+..+- +.+++.+.+.++.+. -+.+
T Consensus         5 ~~k~vlItGas~gIG~~ia~~l~-~~G~-~V~~~~r~~~~~~~~~~~~~~~~~~~~~Dl~~~~~~~~~~~~~~~~-~g~i   81 (261)
T PRK08265          5 AGKVAIVTGGATLIGAAVARALV-AAGA-RVAIVDIDADNGAAVAASLGERARFIATDITDDAAIERAVATVVAR-FGRV   81 (261)
T ss_pred             CCCEEEEECCCChHHHHHHHHHH-HCCC-EEEEEeCCHHHHHHHHHHhCCeeEEEEecCCCHHHHHHHHHHHHHH-hCCC
Confidence            4679999987 999999999554 5699 5777777776544 445555321 222222 223333444443332 3579


Q ss_pred             eEEEeCCCC
Q 017868          257 DVSFDCAGL  265 (365)
Q Consensus       257 d~vid~~g~  265 (365)
                      |++|.+.|.
T Consensus        82 d~lv~~ag~   90 (261)
T PRK08265         82 DILVNLACT   90 (261)
T ss_pred             CEEEECCCC
Confidence            999998873

>PF01408 GFO_IDH_MocA: Oxidoreductase family, NAD-binding Rossmann fold; InterPro: IPR000683 This group of enzymes utilise NADP or NAD, and is known as the GFO/IDH/MOCA family in UniProtKB/Swiss-Prot

Probab=95.23  E-value=0.44  Score=36.07  Aligned_cols=87  Identities=24%  Similarity=0.259  Sum_probs=58.9

Q ss_pred             EEEEEcCCHHHHHHHHHHHHH-CCCCeEEEEeCChhHHHH-HHHcCCCEEEeCCCCcccHHHHHHHHHHHhCCCceEEEe
Q 017868          184 NVLIMGAGPIGLVTMLGAPRA-FGAPRIVIVDVDDYRLSV-AKEIGADNIVKVSTNLQDIAEEVEKIQKAMGTGIDVSFD  261 (365)
Q Consensus       184 ~vlI~G~g~~G~~ai~~l~~~-~g~~~vi~v~~~~~~~~~-~~~~g~~~~~~~~~~~~~~~~~i~~~~~~~~~~~d~vid  261 (365)
                      ++.|.|+|..|.....-+.+. .+.+.+.+++.++++.+. .++++.. .+      .++.+.+.      ...+|+|+-
T Consensus         2 ~v~iiG~G~~g~~~~~~~~~~~~~~~v~~v~d~~~~~~~~~~~~~~~~-~~------~~~~~ll~------~~~~D~V~I   68 (120)
T PF01408_consen    2 RVGIIGAGSIGRRHLRALLRSSPDFEVVAVCDPDPERAEAFAEKYGIP-VY------TDLEELLA------DEDVDAVII   68 (120)
T ss_dssp             EEEEESTSHHHHHHHHHHHHTTTTEEEEEEECSSHHHHHHHHHHTTSE-EE------SSHHHHHH------HTTESEEEE
T ss_pred             EEEEECCcHHHHHHHHHHHhcCCCcEEEEEEeCCHHHHHHHHHHhccc-ch------hHHHHHHH------hhcCCEEEE
Confidence            578999999998877634444 355445556777776664 5778877 22      23333332      247999999


Q ss_pred             CCCCHHHHHHHHHhcccCCEEE
Q 017868          262 CAGLNKTMSTALGATCAGGKVC  283 (365)
Q Consensus       262 ~~g~~~~~~~~~~~l~~~G~~~  283 (365)
                      ++....+.+....++..+-.+.
T Consensus        69 ~tp~~~h~~~~~~~l~~g~~v~   90 (120)
T PF01408_consen   69 ATPPSSHAEIAKKALEAGKHVL   90 (120)
T ss_dssp             ESSGGGHHHHHHHHHHTTSEEE
T ss_pred             ecCCcchHHHHHHHHHcCCEEE
Confidence            9998878888888888666433

GFO is a glucose--fructose oxidoreductase, which converts D-glucose and D-fructose into D-gluconolactone and D-glucitol in the sorbitol-gluconate pathway. MOCA is a rhizopine catabolism protein which may catalyse the NADH-dependent dehydrogenase reaction involved in rhizopine catabolism. Other proteins belonging to this family include Gal80, a negative regulator for the expression of lactose and galactose metabolic genes; and several hypothetical proteins from yeast, Escherichia coli and Bacillus subtilis. The oxidoreductase, N-terminal domain is almost always associated with the oxidoreductase, C-terminal domain (see IPR004104 from INTERPRO).; GO: 0016491 oxidoreductase activity; PDB: 1LC0_A 1LC3_A 1GCU_A 3IP3_E 3CEA_C 3EVN_A 3NTQ_A 3NTR_B 3NT5_A 3MZ0_A ....

>TIGR02355 moeB molybdopterin synthase sulfurylase MoeB

Probab=95.19  E-value=0.35  Score=41.86  Aligned_cols=34  Identities=29%  Similarity=0.473  Sum_probs=28.3

Q ss_pred             CCEEEEEcCCHHHHHHHHHHHHHCCCCeEEEEeCC
Q 017868          182 ETNVLIMGAGPIGLVTMLGAPRAFGAPRIVIVDVD  216 (365)
Q Consensus       182 g~~vlI~G~g~~G~~ai~~l~~~~g~~~vi~v~~~  216 (365)
                      +.+|+|.|+|++|..+++ .+.+.|..++..+|.+
T Consensus        24 ~~~VlvvG~GglGs~va~-~La~~Gvg~i~lvD~D   57 (240)
T TIGR02355        24 ASRVLIVGLGGLGCAASQ-YLAAAGVGNLTLLDFD   57 (240)
T ss_pred             CCcEEEECcCHHHHHHHH-HHHHcCCCEEEEEeCC
Confidence            368999999999999999 5556799888888654

This model describes the molybdopterin biosynthesis protein MoeB in E. coli and related species. The enzyme covalently modifies the molybdopterin synthase MoaD by sulfurylation. This enzyme is closely related to ThiF, a thiamine biosynthesis enzyme that modifies ThiS by an analogous adenylation. Both MoeB and ThiF belong to the HesA/MoeB/ThiF family (pfam00899).

>PRK08644 thiamine biosynthesis protein ThiF; Provisional

Probab=95.19  E-value=0.32  Score=41.22  Aligned_cols=35  Identities=31%  Similarity=0.403  Sum_probs=29.0

Q ss_pred             CCCEEEEEcCCHHHHHHHHHHHHHCCCCeEEEEeCC
Q 017868          181 PETNVLIMGAGPIGLVTMLGAPRAFGAPRIVIVDVD  216 (365)
Q Consensus       181 ~g~~vlI~G~g~~G~~ai~~l~~~~g~~~vi~v~~~  216 (365)
                      ...+|+|.|+|++|..+++ .+.+.|...+..+|.+
T Consensus        27 ~~~~V~ViG~GglGs~ia~-~La~~Gvg~i~lvD~D   61 (212)
T PRK08644         27 KKAKVGIAGAGGLGSNIAV-ALARSGVGNLKLVDFD   61 (212)
T ss_pred             hCCCEEEECcCHHHHHHHH-HHHHcCCCeEEEEeCC
Confidence            4468999999999999999 4456699888888776

>PRK05854 short chain dehydrogenase; Provisional

Probab=95.19  E-value=0.2  Score=45.38  Aligned_cols=81  Identities=20%  Similarity=0.266  Sum_probs=46.7

Q ss_pred             CCCEEEEEcC-CHHHHHHHHHHHHHCCCCeEEEEeCChhHHH-HHHHc----C-CC-EEEeCCC-CcccHHHHHHHHHHH
Q 017868          181 PETNVLIMGA-GPIGLVTMLGAPRAFGAPRIVIVDVDDYRLS-VAKEI----G-AD-NIVKVST-NLQDIAEEVEKIQKA  251 (365)
Q Consensus       181 ~g~~vlI~G~-g~~G~~ai~~l~~~~g~~~vi~v~~~~~~~~-~~~~~----g-~~-~~~~~~~-~~~~~~~~i~~~~~~  251 (365)
                      .+.+++|+|+ +++|.+++..++ ..|+ +|+.+.++.++.+ .++++    + .. ..+..+- +..+......++.+ 
T Consensus        13 ~gk~~lITGas~GIG~~~a~~La-~~G~-~Vil~~R~~~~~~~~~~~l~~~~~~~~v~~~~~Dl~d~~sv~~~~~~~~~-   89 (313)
T PRK05854         13 SGKRAVVTGASDGLGLGLARRLA-AAGA-EVILPVRNRAKGEAAVAAIRTAVPDAKLSLRALDLSSLASVAALGEQLRA-   89 (313)
T ss_pred             CCCEEEEeCCCChHHHHHHHHHH-HCCC-EEEEEeCCHHHHHHHHHHHHHhCCCCceEEEEecCCCHHHHHHHHHHHHH-
Confidence            4678999987 999999999555 5598 5666667766543 22222    1 11 1222222 12222223333322 


Q ss_pred             hCCCceEEEeCCC
Q 017868          252 MGTGIDVSFDCAG  264 (365)
Q Consensus       252 ~~~~~d~vid~~g  264 (365)
                      ..+++|++|.++|
T Consensus        90 ~~~~iD~li~nAG  102 (313)
T PRK05854         90 EGRPIHLLINNAG  102 (313)
T ss_pred             hCCCccEEEECCc
Confidence            2457999999887

>PRK07478 short chain dehydrogenase; Provisional

Probab=95.17  E-value=0.28  Score=42.74  Aligned_cols=82  Identities=20%  Similarity=0.186  Sum_probs=48.6

Q ss_pred             CCCEEEEEcC-CHHHHHHHHHHHHHCCCCeEEEEeCChhHHHHH-H---HcCCCE-EEeCCC-CcccHHHHHHHHHHHhC
Q 017868          181 PETNVLIMGA-GPIGLVTMLGAPRAFGAPRIVIVDVDDYRLSVA-K---EIGADN-IVKVST-NLQDIAEEVEKIQKAMG  253 (365)
Q Consensus       181 ~g~~vlI~G~-g~~G~~ai~~l~~~~g~~~vi~v~~~~~~~~~~-~---~~g~~~-~~~~~~-~~~~~~~~i~~~~~~~~  253 (365)
                      .+.++||+|+ +++|.+++..++ ..|+ .|+.+.+++++.+.+ +   +.+... .+..+- +.++....++++.+. .
T Consensus         5 ~~k~~lItGas~giG~~ia~~l~-~~G~-~v~~~~r~~~~~~~~~~~~~~~~~~~~~~~~D~~~~~~~~~~~~~~~~~-~   81 (254)
T PRK07478          5 NGKVAIITGASSGIGRAAAKLFA-REGA-KVVVGARRQAELDQLVAEIRAEGGEAVALAGDVRDEAYAKALVALAVER-F   81 (254)
T ss_pred             CCCEEEEeCCCChHHHHHHHHHH-HCCC-EEEEEeCCHHHHHHHHHHHHhcCCcEEEEEcCCCCHHHHHHHHHHHHHh-c
Confidence            3678999987 999999999554 5699 567777776655432 2   233322 222222 222333334433332 3


Q ss_pred             CCceEEEeCCCC
Q 017868          254 TGIDVSFDCAGL  265 (365)
Q Consensus       254 ~~~d~vid~~g~  265 (365)
                      +++|++|.++|.
T Consensus        82 ~~id~li~~ag~   93 (254)
T PRK07478         82 GGLDIAFNNAGT   93 (254)
T ss_pred             CCCCEEEECCCC
Confidence            579999998873

>PRK07688 thiamine/molybdopterin biosynthesis ThiF/MoeB-like protein; Validated

Probab=95.14  E-value=0.31  Score=44.52  Aligned_cols=35  Identities=37%  Similarity=0.542  Sum_probs=29.1

Q ss_pred             CCCEEEEEcCCHHHHHHHHHHHHHCCCCeEEEEeCC
Q 017868          181 PETNVLIMGAGPIGLVTMLGAPRAFGAPRIVIVDVD  216 (365)
Q Consensus       181 ~g~~vlI~G~g~~G~~ai~~l~~~~g~~~vi~v~~~  216 (365)
                      ...+|+|.|+|++|..++. .+...|...+..+|.+
T Consensus        23 ~~~~VlVvG~GglGs~va~-~La~aGvg~i~lvD~D   57 (339)
T PRK07688         23 REKHVLIIGAGALGTANAE-MLVRAGVGKVTIVDRD   57 (339)
T ss_pred             cCCcEEEECCCHHHHHHHH-HHHHcCCCeEEEEeCC
Confidence            3468999999999999999 5556699889999875

>PRK08690 enoyl-(acyl carrier protein) reductase; Provisional

Probab=95.14  E-value=0.26  Score=43.27  Aligned_cols=82  Identities=17%  Similarity=0.214  Sum_probs=46.8

Q ss_pred             CCCEEEEEcC---CHHHHHHHHHHHHHCCCCeEEEEeCChhHHHHH----HHcCCCEEEeCCC-CcccHHHHHHHHHHHh
Q 017868          181 PETNVLIMGA---GPIGLVTMLGAPRAFGAPRIVIVDVDDYRLSVA----KEIGADNIVKVST-NLQDIAEEVEKIQKAM  252 (365)
Q Consensus       181 ~g~~vlI~G~---g~~G~~ai~~l~~~~g~~~vi~v~~~~~~~~~~----~~~g~~~~~~~~~-~~~~~~~~i~~~~~~~  252 (365)
                      ++.++||+|+   +++|.++++.++ ..|++ |+.+.+.+...+.+    ++++....+..+- +.++....+.+..+. 
T Consensus         5 ~~k~~lITGa~~~~GIG~a~a~~l~-~~G~~-v~~~~~~~~~~~~~~~~~~~~~~~~~~~~Dv~~~~~v~~~~~~~~~~-   81 (261)
T PRK08690          5 QGKKILITGMISERSIAYGIAKACR-EQGAE-LAFTYVVDKLEERVRKMAAELDSELVFRCDVASDDEINQVFADLGKH-   81 (261)
T ss_pred             CCcEEEEECCCCCCcHHHHHHHHHH-HCCCE-EEEEcCcHHHHHHHHHHHhccCCceEEECCCCCHHHHHHHHHHHHHH-
Confidence            4678999984   589999999454 56995 55554443322222    2334322232222 233444444444332 


Q ss_pred             CCCceEEEeCCCC
Q 017868          253 GTGIDVSFDCAGL  265 (365)
Q Consensus       253 ~~~~d~vid~~g~  265 (365)
                      .+++|+++.++|.
T Consensus        82 ~g~iD~lVnnAG~   94 (261)
T PRK08690         82 WDGLDGLVHSIGF   94 (261)
T ss_pred             hCCCcEEEECCcc
Confidence            3579999998874

>PRK12475 thiamine/molybdopterin biosynthesis MoeB-like protein; Provisional

Probab=95.14  E-value=0.32  Score=44.41  Aligned_cols=35  Identities=37%  Similarity=0.521  Sum_probs=28.9

Q ss_pred             CCCEEEEEcCCHHHHHHHHHHHHHCCCCeEEEEeCC
Q 017868          181 PETNVLIMGAGPIGLVTMLGAPRAFGAPRIVIVDVD  216 (365)
Q Consensus       181 ~g~~vlI~G~g~~G~~ai~~l~~~~g~~~vi~v~~~  216 (365)
                      .+.+|+|.|+|++|..++. .+...|..++..+|.+
T Consensus        23 ~~~~VlIiG~GglGs~va~-~La~aGvg~i~lvD~D   57 (338)
T PRK12475         23 REKHVLIVGAGALGAANAE-ALVRAGIGKLTIADRD   57 (338)
T ss_pred             cCCcEEEECCCHHHHHHHH-HHHHcCCCEEEEEcCC
Confidence            3468999999999999999 5456699888888775

>PRK12823 benD 1,6-dihydroxycyclohexa-2,4-diene-1-carboxylate dehydrogenase; Provisional

Probab=95.13  E-value=0.24  Score=43.26  Aligned_cols=81  Identities=28%  Similarity=0.340  Sum_probs=47.8

Q ss_pred             CCCEEEEEcC-CHHHHHHHHHHHHHCCCCeEEEEeCChhHHHHHHHc---CCCE-EEeCCC-CcccHHHHHHHHHHHhCC
Q 017868          181 PETNVLIMGA-GPIGLVTMLGAPRAFGAPRIVIVDVDDYRLSVAKEI---GADN-IVKVST-NLQDIAEEVEKIQKAMGT  254 (365)
Q Consensus       181 ~g~~vlI~G~-g~~G~~ai~~l~~~~g~~~vi~v~~~~~~~~~~~~~---g~~~-~~~~~~-~~~~~~~~i~~~~~~~~~  254 (365)
                      .+.++||+|+ +++|.++++.+ ...|+ .|+.+++++...+..+++   +... .+..+- +.++....+++..+. .+
T Consensus         7 ~~k~vlVtGas~gIG~~la~~l-~~~G~-~v~~~~r~~~~~~~~~~~~~~~~~~~~~~~D~~~~~~~~~~~~~~~~~-~~   83 (260)
T PRK12823          7 AGKVVVVTGAAQGIGRGVALRA-AAEGA-RVVLVDRSELVHEVAAELRAAGGEALALTADLETYAGAQAAMAAAVEA-FG   83 (260)
T ss_pred             CCCEEEEeCCCchHHHHHHHHH-HHCCC-EEEEEeCchHHHHHHHHHHhcCCeEEEEEEeCCCHHHHHHHHHHHHHH-cC
Confidence            4678999987 99999999945 45698 567777765433333332   3321 111111 222333344444332 35


Q ss_pred             CceEEEeCCC
Q 017868          255 GIDVSFDCAG  264 (365)
Q Consensus       255 ~~d~vid~~g  264 (365)
                      ++|+++.++|
T Consensus        84 ~id~lv~nAg   93 (260)
T PRK12823         84 RIDVLINNVG   93 (260)
T ss_pred             CCeEEEECCc
Confidence            7999999886

>PRK08703 short chain dehydrogenase; Provisional

Probab=95.12  E-value=0.24  Score=42.63  Aligned_cols=83  Identities=20%  Similarity=0.325  Sum_probs=48.7

Q ss_pred             CCCEEEEEcC-CHHHHHHHHHHHHHCCCCeEEEEeCChhHHHHH-HHc---CCC--EE--EeCCC-CcccHHHHHHHHHH
Q 017868          181 PETNVLIMGA-GPIGLVTMLGAPRAFGAPRIVIVDVDDYRLSVA-KEI---GAD--NI--VKVST-NLQDIAEEVEKIQK  250 (365)
Q Consensus       181 ~g~~vlI~G~-g~~G~~ai~~l~~~~g~~~vi~v~~~~~~~~~~-~~~---g~~--~~--~~~~~-~~~~~~~~i~~~~~  250 (365)
                      ++.+++|+|+ |++|..+++.++ ..|+ .|+.+++++++.+.+ .++   +..  ..  .+... ...++......+.+
T Consensus         5 ~~k~vlItG~sggiG~~la~~l~-~~g~-~V~~~~r~~~~~~~~~~~l~~~~~~~~~~~~~D~~~~~~~~~~~~~~~i~~   82 (239)
T PRK08703          5 SDKTILVTGASQGLGEQVAKAYA-AAGA-TVILVARHQKKLEKVYDAIVEAGHPEPFAIRFDLMSAEEKEFEQFAATIAE   82 (239)
T ss_pred             CCCEEEEECCCCcHHHHHHHHHH-HcCC-EEEEEeCChHHHHHHHHHHHHcCCCCcceEEeeecccchHHHHHHHHHHHH
Confidence            4578999987 999999999554 5698 577777877655432 222   211  11  22211 12233333333433


Q ss_pred             HhCCCceEEEeCCCC
Q 017868          251 AMGTGIDVSFDCAGL  265 (365)
Q Consensus       251 ~~~~~~d~vid~~g~  265 (365)
                      ..+..+|++|.++|.
T Consensus        83 ~~~~~id~vi~~ag~   97 (239)
T PRK08703         83 ATQGKLDGIVHCAGY   97 (239)
T ss_pred             HhCCCCCEEEEeccc
Confidence            333578999998883

>PRK06079 enoyl-(acyl carrier protein) reductase; Provisional

Probab=95.11  E-value=0.27  Score=42.91  Aligned_cols=81  Identities=14%  Similarity=0.190  Sum_probs=47.5

Q ss_pred             CCCEEEEEcCC---HHHHHHHHHHHHHCCCCeEEEEeCChhHHHHHHHcCCCE--EEeCCC-CcccHHHHHHHHHHHhCC
Q 017868          181 PETNVLIMGAG---PIGLVTMLGAPRAFGAPRIVIVDVDDYRLSVAKEIGADN--IVKVST-NLQDIAEEVEKIQKAMGT  254 (365)
Q Consensus       181 ~g~~vlI~G~g---~~G~~ai~~l~~~~g~~~vi~v~~~~~~~~~~~~~g~~~--~~~~~~-~~~~~~~~i~~~~~~~~~  254 (365)
                      .++++||+|++   ++|.++++.++ ..|++ |+.+.++++..+.++++....  .+..+- +.++..+.+.++.+. -+
T Consensus         6 ~~k~~lItGas~~~gIG~a~a~~la-~~G~~-Vi~~~r~~~~~~~~~~~~~~~~~~~~~Dl~~~~~v~~~~~~~~~~-~g   82 (252)
T PRK06079          6 SGKKIVVMGVANKRSIAWGCAQAIK-DQGAT-VIYTYQNDRMKKSLQKLVDEEDLLVECDVASDESIERAFATIKER-VG   82 (252)
T ss_pred             CCCEEEEeCCCCCCchHHHHHHHHH-HCCCE-EEEecCchHHHHHHHhhccCceeEEeCCCCCHHHHHHHHHHHHHH-hC
Confidence            57889999874   89999999565 56995 666666544344444442211  222221 223333344443332 25


Q ss_pred             CceEEEeCCC
Q 017868          255 GIDVSFDCAG  264 (365)
Q Consensus       255 ~~d~vid~~g  264 (365)
                      .+|+++.++|
T Consensus        83 ~iD~lv~nAg   92 (252)
T PRK06079         83 KIDGIVHAIA   92 (252)
T ss_pred             CCCEEEEccc
Confidence            7999999877

>TIGR03840 TMPT_Se_Te thiopurine S-methyltransferase, Se/Te detoxification family

Probab=95.11  E-value=0.36  Score=40.95  Aligned_cols=97  Identities=16%  Similarity=0.185  Sum_probs=60.5

Q ss_pred             CCCCEEEEEcCCHHHHHHHHHHHHHCCCCeEEEEeCChhHHHHH-HHcCCCEEE---------------eCCCCcccHHH
Q 017868          180 GPETNVLIMGAGPIGLVTMLGAPRAFGAPRIVIVDVDDYRLSVA-KEIGADNIV---------------KVSTNLQDIAE  243 (365)
Q Consensus       180 ~~g~~vlI~G~g~~G~~ai~~l~~~~g~~~vi~v~~~~~~~~~~-~~~g~~~~~---------------~~~~~~~~~~~  243 (365)
                      .++.+||+.|+|. |.-++- +|. .|. .|++++.++.-.+.+ ++.+.....               .+..+-.++. 
T Consensus        33 ~~~~rvLd~GCG~-G~da~~-LA~-~G~-~V~gvD~S~~Ai~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~D~~~~~-  107 (213)
T TIGR03840        33 PAGARVFVPLCGK-SLDLAW-LAE-QGH-RVLGVELSEIAVEQFFAENGLTPTVTQQGEFTRYRAGNIEIFCGDFFALT-  107 (213)
T ss_pred             CCCCeEEEeCCCc-hhHHHH-HHh-CCC-eEEEEeCCHHHHHHHHHHcCCCcceeccccceeeecCceEEEEccCCCCC-
Confidence            5777999999875 777777 664 599 699999999877764 333332100               0001111110 


Q ss_pred             HHHHHHHHhCCCceEEEeCCC--------CHHHHHHHHHhcccCCEEEEEcc
Q 017868          244 EVEKIQKAMGTGIDVSFDCAG--------LNKTMSTALGATCAGGKVCLVGM  287 (365)
Q Consensus       244 ~i~~~~~~~~~~~d~vid~~g--------~~~~~~~~~~~l~~~G~~~~~g~  287 (365)
                            ......+|.|+|+..        ....+....++|+++|++.+...
T Consensus       108 ------~~~~~~fD~i~D~~~~~~l~~~~R~~~~~~l~~lLkpgG~~ll~~~  153 (213)
T TIGR03840       108 ------AADLGPVDAVYDRAALIALPEEMRQRYAAHLLALLPPGARQLLITL  153 (213)
T ss_pred             ------cccCCCcCEEEechhhccCCHHHHHHHHHHHHHHcCCCCeEEEEEE
Confidence                  001246899999643        12356688899999999777654

Members of this family are thiopurine S-methyltransferase from a branch in which at least some member proteins can perform selenium methylation as a means to detoxify selenium, or perform a related detoxification of tellurium. Note that the EC number definition does not specify a particular thiopurine, but rather represents a class of activity.

>PRK08643 acetoin reductase; Validated

Probab=95.08  E-value=0.29  Score=42.64  Aligned_cols=81  Identities=21%  Similarity=0.295  Sum_probs=47.2

Q ss_pred             CCEEEEEcC-CHHHHHHHHHHHHHCCCCeEEEEeCChhHHHHH-HH---cCCCE-EEeCCC-CcccHHHHHHHHHHHhCC
Q 017868          182 ETNVLIMGA-GPIGLVTMLGAPRAFGAPRIVIVDVDDYRLSVA-KE---IGADN-IVKVST-NLQDIAEEVEKIQKAMGT  254 (365)
Q Consensus       182 g~~vlI~G~-g~~G~~ai~~l~~~~g~~~vi~v~~~~~~~~~~-~~---~g~~~-~~~~~~-~~~~~~~~i~~~~~~~~~  254 (365)
                      +.++||+|+ |++|..+++.++ ..|+ .|+.+++++++.+.+ .+   .+... .+..+- +.+++.+.+.++.+. .+
T Consensus         2 ~k~~lItGas~giG~~la~~l~-~~G~-~v~~~~r~~~~~~~~~~~~~~~~~~~~~~~~Dl~~~~~~~~~~~~~~~~-~~   78 (256)
T PRK08643          2 SKVALVTGAGQGIGFAIAKRLV-EDGF-KVAIVDYNEETAQAAADKLSKDGGKAIAVKADVSDRDQVFAAVRQVVDT-FG   78 (256)
T ss_pred             CCEEEEECCCChHHHHHHHHHH-HCCC-EEEEEeCCHHHHHHHHHHHHhcCCeEEEEECCCCCHHHHHHHHHHHHHH-cC
Confidence            568899987 999999999554 5698 577777776554322 22   23221 122221 222333333333322 35


Q ss_pred             CceEEEeCCCC
Q 017868          255 GIDVSFDCAGL  265 (365)
Q Consensus       255 ~~d~vid~~g~  265 (365)
                      ++|++|.+.|.
T Consensus        79 ~id~vi~~ag~   89 (256)
T PRK08643         79 DLNVVVNNAGV   89 (256)
T ss_pred             CCCEEEECCCC
Confidence            79999998863

>COG0031 CysK Cysteine synthase [Amino acid transport and metabolism]

Probab=95.08  E-value=1  Score=39.99  Aligned_cols=58  Identities=19%  Similarity=0.377  Sum_probs=43.4

Q ss_pred             HhcCCCCCCEEEEEcCCHHHHHHHHHHHHHCCCCeEEEEe--CChhHHHHHHHcCCCEEEe
Q 017868          175 RRANIGPETNVLIMGAGPIGLVTMLGAPRAFGAPRIVIVD--VDDYRLSVAKEIGADNIVK  233 (365)
Q Consensus       175 ~~~~~~~g~~vlI~G~g~~G~~ai~~l~~~~g~~~vi~v~--~~~~~~~~~~~~g~~~~~~  233 (365)
                      +.+.+++|++|+=--+|..|.+.+. +++..|++.++++.  -+.+|.++++.+|+.-+..
T Consensus        55 ~~G~l~pG~tIVE~TSGNTGI~LA~-vaa~~Gy~~iivmP~~~S~er~~~l~a~GAevi~t  114 (300)
T COG0031          55 KRGLLKPGGTIVEATSGNTGIALAM-VAAAKGYRLIIVMPETMSQERRKLLRALGAEVILT  114 (300)
T ss_pred             HcCCCCCCCEEEEcCCChHHHHHHH-HHHHcCCcEEEEeCCCCCHHHHHHHHHcCCEEEEc
Confidence            4577999996544434777877777 88899998777763  4568899999999976544

>PRK08340 glucose-1-dehydrogenase; Provisional

Probab=95.07  E-value=0.31  Score=42.57  Aligned_cols=79  Identities=29%  Similarity=0.283  Sum_probs=47.0

Q ss_pred             EEEEEcC-CHHHHHHHHHHHHHCCCCeEEEEeCChhHHHH-HHH---cCCCEEEeCCC-CcccHHHHHHHHHHHhCCCce
Q 017868          184 NVLIMGA-GPIGLVTMLGAPRAFGAPRIVIVDVDDYRLSV-AKE---IGADNIVKVST-NLQDIAEEVEKIQKAMGTGID  257 (365)
Q Consensus       184 ~vlI~G~-g~~G~~ai~~l~~~~g~~~vi~v~~~~~~~~~-~~~---~g~~~~~~~~~-~~~~~~~~i~~~~~~~~~~~d  257 (365)
                      ++||+|+ +++|.++++.++ ..|+ .|+.+++++++.+. .++   .+-...+..+- +.++..+.+++..+. -+++|
T Consensus         2 ~vlItGas~gIG~aia~~l~-~~G~-~V~~~~r~~~~~~~~~~~l~~~~~~~~~~~Dv~d~~~~~~~~~~~~~~-~g~id   78 (259)
T PRK08340          2 NVLVTASSRGIGFNVARELL-KKGA-RVVISSRNEENLEKALKELKEYGEVYAVKADLSDKDDLKNLVKEAWEL-LGGID   78 (259)
T ss_pred             eEEEEcCCcHHHHHHHHHHH-HcCC-EEEEEeCCHHHHHHHHHHHHhcCCceEEEcCCCCHHHHHHHHHHHHHh-cCCCC
Confidence            6899987 999999999554 5598 57777777665432 222   23222232222 223333444443332 35799


Q ss_pred             EEEeCCCC
Q 017868          258 VSFDCAGL  265 (365)
Q Consensus       258 ~vid~~g~  265 (365)
                      ++|.+.|.
T Consensus        79 ~li~naG~   86 (259)
T PRK08340         79 ALVWNAGN   86 (259)
T ss_pred             EEEECCCC
Confidence            99998873

>PRK08159 enoyl-(acyl carrier protein) reductase; Provisional

Probab=95.07  E-value=0.29  Score=43.25  Aligned_cols=82  Identities=22%  Similarity=0.222  Sum_probs=47.4

Q ss_pred             CCCCEEEEEcC---CHHHHHHHHHHHHHCCCCeEEEEeCCh---hHHH-HHHHcCCCEEEeCCC-CcccHHHHHHHHHHH
Q 017868          180 GPETNVLIMGA---GPIGLVTMLGAPRAFGAPRIVIVDVDD---YRLS-VAKEIGADNIVKVST-NLQDIAEEVEKIQKA  251 (365)
Q Consensus       180 ~~g~~vlI~G~---g~~G~~ai~~l~~~~g~~~vi~v~~~~---~~~~-~~~~~g~~~~~~~~~-~~~~~~~~i~~~~~~  251 (365)
                      -.+.++||+|+   +++|.++++.++ ..|++ |+.+.+++   ++.+ +.++++....+..+- +.++....++++.+.
T Consensus         8 ~~~k~~lItGas~~~GIG~aia~~la-~~G~~-V~l~~r~~~~~~~~~~l~~~~~~~~~~~~Dl~~~~~v~~~~~~~~~~   85 (272)
T PRK08159          8 MAGKRGLILGVANNRSIAWGIAKACR-AAGAE-LAFTYQGDALKKRVEPLAAELGAFVAGHCDVTDEASIDAVFETLEKK   85 (272)
T ss_pred             ccCCEEEEECCCCCCcHHHHHHHHHH-HCCCE-EEEEcCchHHHHHHHHHHHhcCCceEEecCCCCHHHHHHHHHHHHHh
Confidence            35678999986   589999999554 56994 55555543   2222 334455322232222 223333344443332


Q ss_pred             hCCCceEEEeCCC
Q 017868          252 MGTGIDVSFDCAG  264 (365)
Q Consensus       252 ~~~~~d~vid~~g  264 (365)
                       -+++|++|.++|
T Consensus        86 -~g~iD~lv~nAG   97 (272)
T PRK08159         86 -WGKLDFVVHAIG   97 (272)
T ss_pred             -cCCCcEEEECCc
Confidence             357999999886

>PRK07523 gluconate 5-dehydrogenase; Provisional

Probab=95.06  E-value=0.2  Score=43.59  Aligned_cols=82  Identities=18%  Similarity=0.311  Sum_probs=48.3

Q ss_pred             CCCEEEEEcC-CHHHHHHHHHHHHHCCCCeEEEEeCChhHHHH----HHHcCCCE-EEeCCC-CcccHHHHHHHHHHHhC
Q 017868          181 PETNVLIMGA-GPIGLVTMLGAPRAFGAPRIVIVDVDDYRLSV----AKEIGADN-IVKVST-NLQDIAEEVEKIQKAMG  253 (365)
Q Consensus       181 ~g~~vlI~G~-g~~G~~ai~~l~~~~g~~~vi~v~~~~~~~~~----~~~~g~~~-~~~~~~-~~~~~~~~i~~~~~~~~  253 (365)
                      ++.++||+|+ |.+|.++++.++ ..|+ .|+.+++++++.+.    ++..|... .+..+- +.+++...+....+. -
T Consensus         9 ~~k~vlItGa~g~iG~~ia~~l~-~~G~-~V~~~~r~~~~~~~~~~~i~~~~~~~~~~~~D~~~~~~~~~~~~~~~~~-~   85 (255)
T PRK07523          9 TGRRALVTGSSQGIGYALAEGLA-QAGA-EVILNGRDPAKLAAAAESLKGQGLSAHALAFDVTDHDAVRAAIDAFEAE-I   85 (255)
T ss_pred             CCCEEEEECCcchHHHHHHHHHH-HcCC-EEEEEeCCHHHHHHHHHHHHhcCceEEEEEccCCCHHHHHHHHHHHHHh-c
Confidence            4689999987 999999999554 5699 57777777655432    22223221 121122 222333333333222 3


Q ss_pred             CCceEEEeCCCC
Q 017868          254 TGIDVSFDCAGL  265 (365)
Q Consensus       254 ~~~d~vid~~g~  265 (365)
                      +++|++|.+.|.
T Consensus        86 ~~~d~li~~ag~   97 (255)
T PRK07523         86 GPIDILVNNAGM   97 (255)
T ss_pred             CCCCEEEECCCC
Confidence            579999998874

>COG3288 PntA NAD/NADP transhydrogenase alpha subunit [Energy production and conversion]

Probab=95.06  E-value=0.24  Score=43.53  Aligned_cols=145  Identities=13%  Similarity=0.201  Sum_probs=90.5

Q ss_pred             CCCCEEEEEcCCHHHHHHHHHHHHHCCCCeEEEEeCChhHHHHHHHcCCCEEEeCCC---------CcccHHHHHHHHHH
Q 017868          180 GPETNVLIMGAGPIGLVTMLGAPRAFGAPRIVIVDVDDYRLSVAKEIGADNIVKVST---------NLQDIAEEVEKIQK  250 (365)
Q Consensus       180 ~~g~~vlI~G~g~~G~~ai~~l~~~~g~~~vi~v~~~~~~~~~~~~~g~~~~~~~~~---------~~~~~~~~i~~~~~  250 (365)
                      .++.++|+.|.|..|+.++- .++..|+ .|-.-+....+.+..+.+|+...-.-++         -+++|...-.++..
T Consensus       162 v~pA~vlv~G~Gvagl~aia-ta~~lG~-iVt~rdlrm~~Keqv~s~Ga~f~~~~~ee~~gGYAk~ms~~~~~~q~~~~a  239 (356)
T COG3288         162 VSPAKVLVIGAGVAGLAAIA-TAVRLGA-IVTARDLRMFKKEQVESLGAKFLAVEDEESAGGYAKEMSEEFIAKQAELVA  239 (356)
T ss_pred             ccchhhhhhhHHHHHHHHHH-HHhhcce-EEehhhhhhHHhhhhhhcccccccccccccCCCccccCCHHHHHHHHHHHH
Confidence            46678899999999999999 9999998 6666666677778888888754322111         12333332222222


Q ss_pred             HhCCCceEEEeCCCCH------HHHHHHHHhcccCCEEEEEcc-CCCCccc--cchHhhhcCcEEEeeccc-CCcHHHHH
Q 017868          251 AMGTGIDVSFDCAGLN------KTMSTALGATCAGGKVCLVGM-GHHEMTV--PLTPAAVREVDVVGVFRY-KNTWPLCL  320 (365)
Q Consensus       251 ~~~~~~d~vid~~g~~------~~~~~~~~~l~~~G~~~~~g~-~~~~~~~--~~~~~~~~~~~i~~~~~~-~~~~~~~~  320 (365)
                      .--.++|+||-+.-.+      ......+..+++|..++.+.. .+++...  +-.-...++++|+|..+. .+.-.++.
T Consensus       240 ~~~~~~DivITTAlIPGrpAP~Lvt~~mv~sMkpGSViVDlAa~~GGNce~t~pg~~v~~~gV~iig~~nlp~r~a~~aS  319 (356)
T COG3288         240 EQAKEVDIVITTALIPGRPAPKLVTAEMVASMKPGSVIVDLAAETGGNCELTEPGKVVTKNGVKIIGYTNLPGRLAAQAS  319 (356)
T ss_pred             HHhcCCCEEEEecccCCCCCchhhHHHHHHhcCCCcEEEEehhhcCCCcccccCCeEEEeCCeEEEeecCcchhhhhhHH
Confidence            2357899999865321      233467889999999998853 2233322  223356788999998765 33333444


Q ss_pred             HHHHcC
Q 017868          321 ELLRSG  326 (365)
Q Consensus       321 ~~l~~g  326 (365)
                      +++..+
T Consensus       320 ~LYa~N  325 (356)
T COG3288         320 QLYATN  325 (356)
T ss_pred             HHHHHH
Confidence            444433

>PLN02780 ketoreductase/ oxidoreductase

Probab=95.06  E-value=0.21  Score=45.44  Aligned_cols=40  Identities=23%  Similarity=0.237  Sum_probs=31.6

Q ss_pred             CCCEEEEEcC-CHHHHHHHHHHHHHCCCCeEEEEeCChhHHHH
Q 017868          181 PETNVLIMGA-GPIGLVTMLGAPRAFGAPRIVIVDVDDYRLSV  222 (365)
Q Consensus       181 ~g~~vlI~G~-g~~G~~ai~~l~~~~g~~~vi~v~~~~~~~~~  222 (365)
                      .|.++||+|+ +++|.+.+..+++ .|+ +|+.+++++++.+.
T Consensus        52 ~g~~~lITGAs~GIG~alA~~La~-~G~-~Vil~~R~~~~l~~   92 (320)
T PLN02780         52 YGSWALVTGPTDGIGKGFAFQLAR-KGL-NLVLVARNPDKLKD   92 (320)
T ss_pred             cCCEEEEeCCCcHHHHHHHHHHHH-CCC-CEEEEECCHHHHHH
Confidence            5889999997 9999999995654 599 57777888877543

>PRK07024 short chain dehydrogenase; Provisional

Probab=95.04  E-value=0.25  Score=43.13  Aligned_cols=80  Identities=23%  Similarity=0.221  Sum_probs=47.4

Q ss_pred             CCEEEEEcC-CHHHHHHHHHHHHHCCCCeEEEEeCChhHHHH-HHHcCCC---EEEeCCC-CcccHHHHHHHHHHHhCCC
Q 017868          182 ETNVLIMGA-GPIGLVTMLGAPRAFGAPRIVIVDVDDYRLSV-AKEIGAD---NIVKVST-NLQDIAEEVEKIQKAMGTG  255 (365)
Q Consensus       182 g~~vlI~G~-g~~G~~ai~~l~~~~g~~~vi~v~~~~~~~~~-~~~~g~~---~~~~~~~-~~~~~~~~i~~~~~~~~~~  255 (365)
                      +.++||+|+ |++|..+++.+++ .|+ .++.+++++++.+. .+++...   ..+..+- +.+++.+.+.++.+. .+.
T Consensus         2 ~~~vlItGas~gIG~~la~~l~~-~G~-~v~~~~r~~~~~~~~~~~~~~~~~~~~~~~Dl~~~~~i~~~~~~~~~~-~g~   78 (257)
T PRK07024          2 PLKVFITGASSGIGQALAREYAR-QGA-TLGLVARRTDALQAFAARLPKAARVSVYAADVRDADALAAAAADFIAA-HGL   78 (257)
T ss_pred             CCEEEEEcCCcHHHHHHHHHHHH-CCC-EEEEEeCCHHHHHHHHHhcccCCeeEEEEcCCCCHHHHHHHHHHHHHh-CCC
Confidence            358999987 9999999995654 598 57777777766543 3333211   1122222 223333333333322 246


Q ss_pred             ceEEEeCCC
Q 017868          256 IDVSFDCAG  264 (365)
Q Consensus       256 ~d~vid~~g  264 (365)
                      +|+++.++|
T Consensus        79 id~lv~~ag   87 (257)
T PRK07024         79 PDVVIANAG   87 (257)
T ss_pred             CCEEEECCC
Confidence            899999877

>PRK13394 3-hydroxybutyrate dehydrogenase; Provisional

Probab=95.03  E-value=0.36  Score=42.12  Aligned_cols=82  Identities=21%  Similarity=0.336  Sum_probs=47.5

Q ss_pred             CCCEEEEEcC-CHHHHHHHHHHHHHCCCCeEEEEeCChhHHH-H---HHHcCCCEE-EeCCCCc-ccHHHHHHHHHHHhC
Q 017868          181 PETNVLIMGA-GPIGLVTMLGAPRAFGAPRIVIVDVDDYRLS-V---AKEIGADNI-VKVSTNL-QDIAEEVEKIQKAMG  253 (365)
Q Consensus       181 ~g~~vlI~G~-g~~G~~ai~~l~~~~g~~~vi~v~~~~~~~~-~---~~~~g~~~~-~~~~~~~-~~~~~~i~~~~~~~~  253 (365)
                      ++.++||+|+ |.+|..++..+ ...|++ |+.+.+++++.+ .   +++.+.... +..+-.+ .++.+.+.++.. ..
T Consensus         6 ~~~~vlItGasg~iG~~la~~l-~~~G~~-v~~~~r~~~~~~~~~~~~~~~~~~~~~~~~Dl~~~~~~~~~~~~~~~-~~   82 (262)
T PRK13394          6 NGKTAVVTGAASGIGKEIALEL-ARAGAA-VAIADLNQDGANAVADEINKAGGKAIGVAMDVTNEDAVNAGIDKVAE-RF   82 (262)
T ss_pred             CCCEEEEECCCChHHHHHHHHH-HHCCCe-EEEEeCChHHHHHHHHHHHhcCceEEEEECCCCCHHHHHHHHHHHHH-Hc
Confidence            4679999987 99999999945 466995 666767665443 2   233443321 2222222 222222222222 13


Q ss_pred             CCceEEEeCCCC
Q 017868          254 TGIDVSFDCAGL  265 (365)
Q Consensus       254 ~~~d~vid~~g~  265 (365)
                      +++|++|.+.|.
T Consensus        83 ~~~d~vi~~ag~   94 (262)
T PRK13394         83 GSVDILVSNAGI   94 (262)
T ss_pred             CCCCEEEECCcc
Confidence            578999998874

>TIGR03215 ac_ald_DH_ac acetaldehyde dehydrogenase (acetylating)

Probab=95.02  E-value=0.43  Score=42.32  Aligned_cols=89  Identities=22%  Similarity=0.275  Sum_probs=58.1

Q ss_pred             EEEEEcCCHHHHHH-HHHHHHHCCCCeEEEEeCChhH--HHHHHHcCCCEEEeCCCCcccHHHHHHHHHHHhCCCceEEE
Q 017868          184 NVLIMGAGPIGLVT-MLGAPRAFGAPRIVIVDVDDYR--LSVAKEIGADNIVKVSTNLQDIAEEVEKIQKAMGTGIDVSF  260 (365)
Q Consensus       184 ~vlI~G~g~~G~~a-i~~l~~~~g~~~vi~v~~~~~~--~~~~~~~g~~~~~~~~~~~~~~~~~i~~~~~~~~~~~d~vi  260 (365)
                      +|.|.|+|.+|... .. +.+..+++.+..++.++++  .++++++|.....      .++...+.      ...+|+|+
T Consensus         3 rVAIIG~G~IG~~h~~~-ll~~~~~elvaV~d~d~es~~la~A~~~Gi~~~~------~~~e~ll~------~~dIDaV~   69 (285)
T TIGR03215         3 KVAIIGSGNIGTDLMYK-LLRSEHLEMVAMVGIDPESDGLARARELGVKTSA------EGVDGLLA------NPDIDIVF   69 (285)
T ss_pred             EEEEEeCcHHHHHHHHH-HHhCCCcEEEEEEeCCcccHHHHHHHHCCCCEEE------CCHHHHhc------CCCCCEEE
Confidence            67899999999855 45 5555567655556655543  4677888865432      12322221      34799999


Q ss_pred             eCCCCHHHHHHHHHhcccCCEEEEE
Q 017868          261 DCAGLNKTMSTALGATCAGGKVCLV  285 (365)
Q Consensus       261 d~~g~~~~~~~~~~~l~~~G~~~~~  285 (365)
                      ++++...+...+..++..+=+++..
T Consensus        70 iaTp~~~H~e~a~~al~aGk~VIde   94 (285)
T TIGR03215        70 DATSAKAHARHARLLAELGKIVIDL   94 (285)
T ss_pred             ECCCcHHHHHHHHHHHHcCCEEEEC
Confidence            9999887777777776655554443

Members of this protein family are acetaldehyde dehydrogenase (acetylating), EC 1.2.1.10. This enzyme oxidizes acetaldehyde, using NAD(+), and attaches coenzyme A (CoA), yielding acetyl-CoA. It occurs as a late step in the meta-cleavage pathways of a variety of compounds, including catechol, biphenyl, toluene, salicylate, etc.

>PRK06719 precorrin-2 dehydrogenase; Validated

Probab=95.02  E-value=0.81  Score=36.75  Aligned_cols=83  Identities=12%  Similarity=0.099  Sum_probs=48.1

Q ss_pred             CCCEEEEEcCCHHHHHHHHHHHHHCCCCeEEEEeCChhHHHHHHHcCCCEEEeCCCCcccHHHHHHHHHHHhCCCceEEE
Q 017868          181 PETNVLIMGAGPIGLVTMLGAPRAFGAPRIVIVDVDDYRLSVAKEIGADNIVKVSTNLQDIAEEVEKIQKAMGTGIDVSF  260 (365)
Q Consensus       181 ~g~~vlI~G~g~~G~~ai~~l~~~~g~~~vi~v~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~i~~~~~~~~~~~d~vi  260 (365)
                      .|.+|||.|+|.+|..-++ .+...|++ |.+++  ++..+.+++++.....   .  ..+.       +..-.++|+|+
T Consensus        12 ~~~~vlVvGGG~va~rka~-~Ll~~ga~-V~VIs--p~~~~~l~~l~~i~~~---~--~~~~-------~~dl~~a~lVi   75 (157)
T PRK06719         12 HNKVVVIIGGGKIAYRKAS-GLKDTGAF-VTVVS--PEICKEMKELPYITWK---Q--KTFS-------NDDIKDAHLIY   75 (157)
T ss_pred             CCCEEEEECCCHHHHHHHH-HHHhCCCE-EEEEc--CccCHHHHhccCcEEE---e--cccC-------hhcCCCceEEE
Confidence            5789999999999998888 44556885 55553  3333333445422211   1  1111       11135799999


Q ss_pred             eCCCCHHHHHHHHHhcccCC
Q 017868          261 DCAGLNKTMSTALGATCAGG  280 (365)
Q Consensus       261 d~~g~~~~~~~~~~~l~~~G  280 (365)
                      -+++... .+..+...+...
T Consensus        76 aaT~d~e-~N~~i~~~a~~~   94 (157)
T PRK06719         76 AATNQHA-VNMMVKQAAHDF   94 (157)
T ss_pred             ECCCCHH-HHHHHHHHHHHC
Confidence            9999764 454444444333

>cd01487 E1_ThiF_like E1_ThiF_like

Probab=95.01  E-value=0.3  Score=39.97  Aligned_cols=33  Identities=30%  Similarity=0.329  Sum_probs=27.1

Q ss_pred             EEEEEcCCHHHHHHHHHHHHHCCCCeEEEEeCCh
Q 017868          184 NVLIMGAGPIGLVTMLGAPRAFGAPRIVIVDVDD  217 (365)
Q Consensus       184 ~vlI~G~g~~G~~ai~~l~~~~g~~~vi~v~~~~  217 (365)
                      +|+|.|+|++|..+++.+ .+.|..++..+|.+.
T Consensus         1 ~VlViG~GglGs~ia~~L-a~~Gvg~i~lvD~D~   33 (174)
T cd01487           1 KVGIAGAGGLGSNIAVLL-ARSGVGNLKLVDFDV   33 (174)
T ss_pred             CEEEECcCHHHHHHHHHH-HHcCCCeEEEEeCCE
Confidence            489999999999999944 466998888887664

Member of superfamily of activating enzymes (E1) of the ubiquitin-like proteins. The common reaction mechanism catalyzed by E1-like enzymes begins with a nucleophilic attack of the C-terminal carboxylate of the ubiquitin-like substrate, on the alpha-phosphate of an ATP molecule bound at the active site of the activating enzymes, leading to the formation of a high-energy acyladenylate intermediate and subsequently to the formation of a thiocarboxylate at the C termini of the substrate. The exact function of this family is unknown.

>PRK08300 acetaldehyde dehydrogenase; Validated

Probab=95.00  E-value=0.39  Score=42.84  Aligned_cols=94  Identities=22%  Similarity=0.232  Sum_probs=58.7

Q ss_pred             CEEEEEcCCHHHHHHHHHHHHHCCCCeEEEEeCChh--HHHHHHHcCCCEEEeCCCCcccHHHHHHHHHHHhCCCceEEE
Q 017868          183 TNVLIMGAGPIGLVTMLGAPRAFGAPRIVIVDVDDY--RLSVAKEIGADNIVKVSTNLQDIAEEVEKIQKAMGTGIDVSF  260 (365)
Q Consensus       183 ~~vlI~G~g~~G~~ai~~l~~~~g~~~vi~v~~~~~--~~~~~~~~g~~~~~~~~~~~~~~~~~i~~~~~~~~~~~d~vi  260 (365)
                      -++.|.|+|.+|...+..+.+..+.+.+..++.+++  ....++++|.....      .++...+...   .-..+|+||
T Consensus         5 lrVAIIGtG~IGt~hm~~l~~~~~velvAVvdid~es~gla~A~~~Gi~~~~------~~ie~LL~~~---~~~dIDiVf   75 (302)
T PRK08300          5 LKVAIIGSGNIGTDLMIKILRSEHLEPGAMVGIDPESDGLARARRLGVATSA------EGIDGLLAMP---EFDDIDIVF   75 (302)
T ss_pred             CeEEEEcCcHHHHHHHHHHhcCCCcEEEEEEeCChhhHHHHHHHHcCCCccc------CCHHHHHhCc---CCCCCCEEE
Confidence            478899999999975543655556765556666554  34667888865321      2333333210   015799999


Q ss_pred             eCCCCHHHHHHHHHhcccCCEEEEE
Q 017868          261 DCAGLNKTMSTALGATCAGGKVCLV  285 (365)
Q Consensus       261 d~~g~~~~~~~~~~~l~~~G~~~~~  285 (365)
                      ++++...+...+..++..|-+++..
T Consensus        76 ~AT~a~~H~e~a~~a~eaGk~VID~  100 (302)
T PRK08300         76 DATSAGAHVRHAAKLREAGIRAIDL  100 (302)
T ss_pred             ECCCHHHHHHHHHHHHHcCCeEEEC
Confidence            9999876666666666655555544

>PF01113 DapB_N: Dihydrodipicolinate reductase, N-terminus; InterPro: IPR000846 Dihydrodipicolinate reductase catalyzes the second step in the biosynthesis of diaminopimelic acid and lysine, the NAD or NADP-dependent reduction of 2,3-dihydrodipicolinate into 2,3,4,5-tetrahydrodipicolinate [, , ]

Probab=95.00  E-value=0.38  Score=36.90  Aligned_cols=94  Identities=20%  Similarity=0.198  Sum_probs=52.9

Q ss_pred             EEEEEcC-CHHHHHHHHHHHHHCCCCeEEEEeCChh---HHHHHHHcCCCE--EEeCCCCcccHHHHHHHHHHHhCCCce
Q 017868          184 NVLIMGA-GPIGLVTMLGAPRAFGAPRIVIVDVDDY---RLSVAKEIGADN--IVKVSTNLQDIAEEVEKIQKAMGTGID  257 (365)
Q Consensus       184 ~vlI~G~-g~~G~~ai~~l~~~~g~~~vi~v~~~~~---~~~~~~~~g~~~--~~~~~~~~~~~~~~i~~~~~~~~~~~d  257 (365)
                      +|.|+|+ |.+|..+++.+.+..+.+.+.++++.++   ..+.-+-.|...  +..+    .+    +.+.    -..+|
T Consensus         2 rV~i~G~~GrMG~~i~~~i~~~~~~~lv~~v~~~~~~~~g~d~g~~~~~~~~~~~v~----~~----l~~~----~~~~D   69 (124)
T PF01113_consen    2 RVGIVGASGRMGRAIAEAILESPGFELVGAVDRKPSAKVGKDVGELAGIGPLGVPVT----DD----LEEL----LEEAD   69 (124)
T ss_dssp             EEEEETTTSHHHHHHHHHHHHSTTEEEEEEEETTTSTTTTSBCHHHCTSST-SSBEB----S-----HHHH----TTH-S
T ss_pred             EEEEECCCCHHHHHHHHHHHhcCCcEEEEEEecCCcccccchhhhhhCcCCcccccc----hh----HHHh----cccCC
Confidence            6889999 9999999995655578876677766651   112222222211  1111    12    2222    23389


Q ss_pred             EEEeCCCCHHHHHHHHHhcccCCEEEEEccCCC
Q 017868          258 VSFDCAGLNKTMSTALGATCAGGKVCLVGMGHH  290 (365)
Q Consensus       258 ~vid~~g~~~~~~~~~~~l~~~G~~~~~g~~~~  290 (365)
                      ++||++. ++.....++.+...|.-+.+|.++.
T Consensus        70 VvIDfT~-p~~~~~~~~~~~~~g~~~ViGTTG~  101 (124)
T PF01113_consen   70 VVIDFTN-PDAVYDNLEYALKHGVPLVIGTTGF  101 (124)
T ss_dssp             EEEEES--HHHHHHHHHHHHHHT-EEEEE-SSS
T ss_pred             EEEEcCC-hHHhHHHHHHHHhCCCCEEEECCCC
Confidence            9999885 5555555565555677777776554

In Escherichia coli and Mycobacterium tuberculosis, dihydrodipicolinate reductase has equal specificity for NADH and NADPH, however in Thermotoga maritima there it has a greater affinity for NADPH []. In addition, the enzyme is inhibited by high concentrations of its substrate, which consequently acts as a feedback control on the lysine biosynthesis pathway. In T. maritima, the enzyme also lacks N-terminal and C-terminal loops which are present in enzyme of the former two organisms. This entry represents the N-terminal domain of dihydrodipicolinate reductase which binds the dinucleotide NAD(P)H.; GO: 0008839 dihydrodipicolinate reductase activity, 0009089 lysine biosynthetic process via diaminopimelate, 0055114 oxidation-reduction process; PDB: 3QY9_D 1VM6_C 1ARZ_A 1DIH_A 1DRW_A 1DRV_A 1DRU_A 2DAP_A 1DAP_B 3DAP_A ....

>TIGR00446 nop2p NOL1/NOP2/sun family putative RNA methylase

Probab=94.99  E-value=0.86  Score=40.10  Aligned_cols=100  Identities=21%  Similarity=0.231  Sum_probs=59.7

Q ss_pred             hcCCCCCCEEEEEcCCHHHHHHHHHHHHHCC-CCeEEEEeCChhHHHHH----HHcCCCEEEeCCCCcccHHHHHHHHHH
Q 017868          176 RANIGPETNVLIMGAGPIGLVTMLGAPRAFG-APRIVIVDVDDYRLSVA----KEIGADNIVKVSTNLQDIAEEVEKIQK  250 (365)
Q Consensus       176 ~~~~~~g~~vlI~G~g~~G~~ai~~l~~~~g-~~~vi~v~~~~~~~~~~----~~~g~~~~~~~~~~~~~~~~~i~~~~~  250 (365)
                      ...+++|++||=.|+|+ |..++. ++..++ ...|++++.++++.+.+    +.+|...+.....+..++    ..   
T Consensus        66 ~l~~~~g~~VLDl~ag~-G~kt~~-la~~~~~~g~v~a~D~~~~~l~~~~~n~~~~g~~~v~~~~~D~~~~----~~---  136 (264)
T TIGR00446        66 ALEPDPPERVLDMAAAP-GGKTTQ-ISALMKNEGAIVANEFSKSRTKVLIANINRCGVLNVAVTNFDGRVF----GA---  136 (264)
T ss_pred             HhCCCCcCEEEEECCCc-hHHHHH-HHHHcCCCCEEEEEcCCHHHHHHHHHHHHHcCCCcEEEecCCHHHh----hh---
Confidence            34678999988887643 444444 444433 23799999999886544    556765433322221111    11   


Q ss_pred             HhCCCceEEEe---CCCC-------------------------HHHHHHHHHhcccCCEEEEE
Q 017868          251 AMGTGIDVSFD---CAGL-------------------------NKTMSTALGATCAGGKVCLV  285 (365)
Q Consensus       251 ~~~~~~d~vid---~~g~-------------------------~~~~~~~~~~l~~~G~~~~~  285 (365)
                       ....+|.|+-   |+|.                         ...+..+++.|+++|+++..
T Consensus       137 -~~~~fD~Vl~D~Pcsg~G~~~~~p~~~~~~~~~~~~~l~~~q~~iL~~a~~~lkpgG~lvYs  198 (264)
T TIGR00446       137 -AVPKFDAILLDAPCSGEGVIRKDPSRKKNWSEEDIQEISALQKELIDSAFDALKPGGVLVYS  198 (264)
T ss_pred             -hccCCCEEEEcCCCCCCcccccChhhhhcCCHHHHHHHHHHHHHHHHHHHHhcCCCCEEEEE
Confidence             1245998864   4442                         12555788899999998754

>PRK05717 oxidoreductase; Validated

Probab=94.96  E-value=0.35  Score=42.15  Aligned_cols=82  Identities=26%  Similarity=0.263  Sum_probs=48.3

Q ss_pred             CCCEEEEEcC-CHHHHHHHHHHHHHCCCCeEEEEeCChhHHH-HHHHcCCC-EEEeCCC-CcccHHHHHHHHHHHhCCCc
Q 017868          181 PETNVLIMGA-GPIGLVTMLGAPRAFGAPRIVIVDVDDYRLS-VAKEIGAD-NIVKVST-NLQDIAEEVEKIQKAMGTGI  256 (365)
Q Consensus       181 ~g~~vlI~G~-g~~G~~ai~~l~~~~g~~~vi~v~~~~~~~~-~~~~~g~~-~~~~~~~-~~~~~~~~i~~~~~~~~~~~  256 (365)
                      .|.++||+|+ |.+|..++..++ ..|+ .|+.++++.++.+ ..++++.. ..+..+- +..+....+.++.+. -+++
T Consensus         9 ~~k~vlItG~sg~IG~~~a~~l~-~~g~-~v~~~~~~~~~~~~~~~~~~~~~~~~~~Dl~~~~~~~~~~~~~~~~-~g~i   85 (255)
T PRK05717          9 NGRVALVTGAARGIGLGIAAWLI-AEGW-QVVLADLDRERGSKVAKALGENAWFIAMDVADEAQVAAGVAEVLGQ-FGRL   85 (255)
T ss_pred             CCCEEEEeCCcchHHHHHHHHHH-HcCC-EEEEEcCCHHHHHHHHHHcCCceEEEEccCCCHHHHHHHHHHHHHH-hCCC
Confidence            4678999987 999999999554 5588 5666766655433 34455432 1222221 122333333443332 2479


Q ss_pred             eEEEeCCCC
Q 017868          257 DVSFDCAGL  265 (365)
Q Consensus       257 d~vid~~g~  265 (365)
                      |++|.+.|.
T Consensus        86 d~li~~ag~   94 (255)
T PRK05717         86 DALVCNAAI   94 (255)
T ss_pred             CEEEECCCc
Confidence            999998873

>PRK06194 hypothetical protein; Provisional

Probab=94.95  E-value=0.36  Score=42.91  Aligned_cols=82  Identities=22%  Similarity=0.333  Sum_probs=47.4

Q ss_pred             CCCEEEEEcC-CHHHHHHHHHHHHHCCCCeEEEEeCChhHHH-HHHHc---CCCE-EEeCCC-CcccHHHHHHHHHHHhC
Q 017868          181 PETNVLIMGA-GPIGLVTMLGAPRAFGAPRIVIVDVDDYRLS-VAKEI---GADN-IVKVST-NLQDIAEEVEKIQKAMG  253 (365)
Q Consensus       181 ~g~~vlI~G~-g~~G~~ai~~l~~~~g~~~vi~v~~~~~~~~-~~~~~---g~~~-~~~~~~-~~~~~~~~i~~~~~~~~  253 (365)
                      .+.++||+|+ |++|..+++.+ ...|+ .|+.++++.++.+ ...++   +... .+..+- +.+++.+.+..+.+. .
T Consensus         5 ~~k~vlVtGasggIG~~la~~l-~~~G~-~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~D~~d~~~~~~~~~~~~~~-~   81 (287)
T PRK06194          5 AGKVAVITGAASGFGLAFARIG-AALGM-KLVLADVQQDALDRAVAELRAQGAEVLGVRTDVSDAAQVEALADAALER-F   81 (287)
T ss_pred             CCCEEEEeCCccHHHHHHHHHH-HHCCC-EEEEEeCChHHHHHHHHHHHhcCCeEEEEECCCCCHHHHHHHHHHHHHH-c
Confidence            3578999987 99999999945 45698 5677777655433 22322   3221 122221 122333333333222 3


Q ss_pred             CCceEEEeCCCC
Q 017868          254 TGIDVSFDCAGL  265 (365)
Q Consensus       254 ~~~d~vid~~g~  265 (365)
                      +++|++|.++|.
T Consensus        82 g~id~vi~~Ag~   93 (287)
T PRK06194         82 GAVHLLFNNAGV   93 (287)
T ss_pred             CCCCEEEECCCC
Confidence            578999998874

>PRK06128 oxidoreductase; Provisional

Probab=94.95  E-value=0.82  Score=41.01  Aligned_cols=81  Identities=22%  Similarity=0.256  Sum_probs=45.5

Q ss_pred             CCCEEEEEcC-CHHHHHHHHHHHHHCCCCeEEEEeCChh------HHHHHHHcCCCEE-EeCCC-CcccHHHHHHHHHHH
Q 017868          181 PETNVLIMGA-GPIGLVTMLGAPRAFGAPRIVIVDVDDY------RLSVAKEIGADNI-VKVST-NLQDIAEEVEKIQKA  251 (365)
Q Consensus       181 ~g~~vlI~G~-g~~G~~ai~~l~~~~g~~~vi~v~~~~~------~~~~~~~~g~~~~-~~~~~-~~~~~~~~i~~~~~~  251 (365)
                      .+.++||+|+ +++|.+++..++ ..|++ |+.+.++.+      ..+.+++.+.... +..+- +.++..+.+.++.+.
T Consensus        54 ~~k~vlITGas~gIG~~~a~~l~-~~G~~-V~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~~Dl~~~~~v~~~~~~~~~~  131 (300)
T PRK06128         54 QGRKALITGADSGIGRATAIAFA-REGAD-IALNYLPEEEQDAAEVVQLIQAEGRKAVALPGDLKDEAFCRQLVERAVKE  131 (300)
T ss_pred             CCCEEEEecCCCcHHHHHHHHHH-HcCCE-EEEEeCCcchHHHHHHHHHHHHcCCeEEEEecCCCCHHHHHHHHHHHHHH
Confidence            4679999987 999999999555 55995 444433321      1223344443321 22221 222333333333332


Q ss_pred             hCCCceEEEeCCC
Q 017868          252 MGTGIDVSFDCAG  264 (365)
Q Consensus       252 ~~~~~d~vid~~g  264 (365)
                       -+++|++|.++|
T Consensus       132 -~g~iD~lV~nAg  143 (300)
T PRK06128        132 -LGGLDILVNIAG  143 (300)
T ss_pred             -hCCCCEEEECCc
Confidence             357999999887

>PRK06172 short chain dehydrogenase; Provisional

Probab=94.95  E-value=0.34  Score=42.10  Aligned_cols=82  Identities=26%  Similarity=0.346  Sum_probs=48.5

Q ss_pred             CCCEEEEEcC-CHHHHHHHHHHHHHCCCCeEEEEeCChhHHH----HHHHcCCC-EEEeCCCC-cccHHHHHHHHHHHhC
Q 017868          181 PETNVLIMGA-GPIGLVTMLGAPRAFGAPRIVIVDVDDYRLS----VAKEIGAD-NIVKVSTN-LQDIAEEVEKIQKAMG  253 (365)
Q Consensus       181 ~g~~vlI~G~-g~~G~~ai~~l~~~~g~~~vi~v~~~~~~~~----~~~~~g~~-~~~~~~~~-~~~~~~~i~~~~~~~~  253 (365)
                      ++.++||+|+ |++|..++..++ ..|+ +|+.+++++++.+    .+++.+.. ..+..+-. ..+....+....+. -
T Consensus         6 ~~k~ilItGas~~iG~~ia~~l~-~~G~-~v~~~~r~~~~~~~~~~~~~~~~~~~~~~~~D~~~~~~i~~~~~~~~~~-~   82 (253)
T PRK06172          6 SGKVALVTGGAAGIGRATALAFA-REGA-KVVVADRDAAGGEETVALIREAGGEALFVACDVTRDAEVKALVEQTIAA-Y   82 (253)
T ss_pred             CCCEEEEeCCCchHHHHHHHHHH-HcCC-EEEEEeCCHHHHHHHHHHHHhcCCceEEEEcCCCCHHHHHHHHHHHHHH-h
Confidence            4679999987 999999999555 5588 5777777765533    22333432 22222221 22333333333332 2


Q ss_pred             CCceEEEeCCCC
Q 017868          254 TGIDVSFDCAGL  265 (365)
Q Consensus       254 ~~~d~vid~~g~  265 (365)
                      +++|++|.+.|.
T Consensus        83 g~id~li~~ag~   94 (253)
T PRK06172         83 GRLDYAFNNAGI   94 (253)
T ss_pred             CCCCEEEECCCC
Confidence            478999998873

>PRK07109 short chain dehydrogenase; Provisional

Probab=94.94  E-value=0.34  Score=44.34  Aligned_cols=82  Identities=18%  Similarity=0.270  Sum_probs=49.1

Q ss_pred             CCCEEEEEcC-CHHHHHHHHHHHHHCCCCeEEEEeCChhHHHH----HHHcCCCEE-EeCCC-CcccHHHHHHHHHHHhC
Q 017868          181 PETNVLIMGA-GPIGLVTMLGAPRAFGAPRIVIVDVDDYRLSV----AKEIGADNI-VKVST-NLQDIAEEVEKIQKAMG  253 (365)
Q Consensus       181 ~g~~vlI~G~-g~~G~~ai~~l~~~~g~~~vi~v~~~~~~~~~----~~~~g~~~~-~~~~~-~~~~~~~~i~~~~~~~~  253 (365)
                      .+.++||+|+ +++|..+++.+ ...|+ .|+.+++++++.+.    +++.|.... +..+- +.++..+.+..+.+. -
T Consensus         7 ~~k~vlITGas~gIG~~la~~l-a~~G~-~Vvl~~R~~~~l~~~~~~l~~~g~~~~~v~~Dv~d~~~v~~~~~~~~~~-~   83 (334)
T PRK07109          7 GRQVVVITGASAGVGRATARAF-ARRGA-KVVLLARGEEGLEALAAEIRAAGGEALAVVADVADAEAVQAAADRAEEE-L   83 (334)
T ss_pred             CCCEEEEECCCCHHHHHHHHHH-HHCCC-EEEEEECCHHHHHHHHHHHHHcCCcEEEEEecCCCHHHHHHHHHHHHHH-C
Confidence            4678999987 99999999945 45698 56667777766542    233454322 22221 222333333333222 2


Q ss_pred             CCceEEEeCCCC
Q 017868          254 TGIDVSFDCAGL  265 (365)
Q Consensus       254 ~~~d~vid~~g~  265 (365)
                      +++|++|+++|.
T Consensus        84 g~iD~lInnAg~   95 (334)
T PRK07109         84 GPIDTWVNNAMV   95 (334)
T ss_pred             CCCCEEEECCCc
Confidence            579999998873

>cd01483 E1_enzyme_family Superfamily of activating enzymes (E1) of the ubiquitin-like proteins

Probab=94.92  E-value=0.58  Score=36.82  Aligned_cols=32  Identities=31%  Similarity=0.534  Sum_probs=26.5

Q ss_pred             EEEEEcCCHHHHHHHHHHHHHCCCCeEEEEeCC
Q 017868          184 NVLIMGAGPIGLVTMLGAPRAFGAPRIVIVDVD  216 (365)
Q Consensus       184 ~vlI~G~g~~G~~ai~~l~~~~g~~~vi~v~~~  216 (365)
                      +|+|.|+|++|..++. .+-..|..++..+|.+
T Consensus         1 ~VliiG~GglGs~ia~-~L~~~Gv~~i~ivD~d   32 (143)
T cd01483           1 RVLLVGLGGLGSEIAL-NLARSGVGKITLIDFD   32 (143)
T ss_pred             CEEEECCCHHHHHHHH-HHHHCCCCEEEEEcCC
Confidence            4889999999999999 5557799888888654

This family includes classical ubiquitin-activating enzymes E1, ubiquitin-like (ubl) activating enzymes and other mechanistic homologes, like MoeB, Thif1 and others. The common reaction mechanism catalyzed by MoeB, ThiF and the E1 enzymes begins with a nucleophilic attack of the C-terminal carboxylate of MoaD, ThiS and ubiquitin, respectively, on the alpha-phosphate of an ATP molecule bound at the active site of the activating enzymes, leading to the formation of a high-energy acyladenylate intermediate and subsequently to the formation of a thiocarboxylate at the C termini of MoaD and ThiS.

>PRK06179 short chain dehydrogenase; Provisional

Probab=94.92  E-value=0.12  Score=45.61  Aligned_cols=78  Identities=22%  Similarity=0.295  Sum_probs=47.6

Q ss_pred             CCEEEEEcC-CHHHHHHHHHHHHHCCCCeEEEEeCChhHHHHHHHcCCCEEEeCC-CCcccHHHHHHHHHHHhCCCceEE
Q 017868          182 ETNVLIMGA-GPIGLVTMLGAPRAFGAPRIVIVDVDDYRLSVAKEIGADNIVKVS-TNLQDIAEEVEKIQKAMGTGIDVS  259 (365)
Q Consensus       182 g~~vlI~G~-g~~G~~ai~~l~~~~g~~~vi~v~~~~~~~~~~~~~g~~~~~~~~-~~~~~~~~~i~~~~~~~~~~~d~v  259 (365)
                      +.+++|+|+ |++|..+++.++ ..|+ .|++++++.++.+..  .+.. .+..+ .+.+++...++.+.+. -+.+|++
T Consensus         4 ~~~vlVtGasg~iG~~~a~~l~-~~g~-~V~~~~r~~~~~~~~--~~~~-~~~~D~~d~~~~~~~~~~~~~~-~g~~d~l   77 (270)
T PRK06179          4 SKVALVTGASSGIGRATAEKLA-RAGY-RVFGTSRNPARAAPI--PGVE-LLELDVTDDASVQAAVDEVIAR-AGRIDVL   77 (270)
T ss_pred             CCEEEEecCCCHHHHHHHHHHH-HCCC-EEEEEeCChhhcccc--CCCe-eEEeecCCHHHHHHHHHHHHHh-CCCCCEE
Confidence            468999987 999999999555 5598 477777766554321  1222 12221 2233444444444332 3579999


Q ss_pred             EeCCCC
Q 017868          260 FDCAGL  265 (365)
Q Consensus       260 id~~g~  265 (365)
                      |.+.|.
T Consensus        78 i~~ag~   83 (270)
T PRK06179         78 VNNAGV   83 (270)
T ss_pred             EECCCC
Confidence            999884

>PRK07326 short chain dehydrogenase; Provisional

Probab=94.90  E-value=0.29  Score=42.01  Aligned_cols=82  Identities=26%  Similarity=0.268  Sum_probs=49.0

Q ss_pred             CCCEEEEEcC-CHHHHHHHHHHHHHCCCCeEEEEeCChhHHH-HHHHcCC---CEEEeCC-CCcccHHHHHHHHHHHhCC
Q 017868          181 PETNVLIMGA-GPIGLVTMLGAPRAFGAPRIVIVDVDDYRLS-VAKEIGA---DNIVKVS-TNLQDIAEEVEKIQKAMGT  254 (365)
Q Consensus       181 ~g~~vlI~G~-g~~G~~ai~~l~~~~g~~~vi~v~~~~~~~~-~~~~~g~---~~~~~~~-~~~~~~~~~i~~~~~~~~~  254 (365)
                      .+.++||+|+ |.+|..+++.++ ..|++ |+++++++++.+ +.+++..   ...+..+ .+..++.+.+++..+. .+
T Consensus         5 ~~~~ilItGatg~iG~~la~~l~-~~g~~-V~~~~r~~~~~~~~~~~l~~~~~~~~~~~D~~~~~~~~~~~~~~~~~-~~   81 (237)
T PRK07326          5 KGKVALITGGSKGIGFAIAEALL-AEGYK-VAITARDQKELEEAAAELNNKGNVLGLAADVRDEADVQRAVDAIVAA-FG   81 (237)
T ss_pred             CCCEEEEECCCCcHHHHHHHHHH-HCCCE-EEEeeCCHHHHHHHHHHHhccCcEEEEEccCCCHHHHHHHHHHHHHH-cC
Confidence            4678999987 999999999555 45985 777777766543 3344431   1122222 1223333344443332 24


Q ss_pred             CceEEEeCCCC
Q 017868          255 GIDVSFDCAGL  265 (365)
Q Consensus       255 ~~d~vid~~g~  265 (365)
                      ++|++|.+.|.
T Consensus        82 ~~d~vi~~ag~   92 (237)
T PRK07326         82 GLDVLIANAGV   92 (237)
T ss_pred             CCCEEEECCCC
Confidence            79999998763

>PF13241 NAD_binding_7: Putative NAD(P)-binding; PDB: 3DFZ_B 1PJT_A 1PJS_A 1PJQ_A 1KYQ_B

Probab=94.90  E-value=0.41  Score=35.38  Aligned_cols=87  Identities=17%  Similarity=0.284  Sum_probs=53.9

Q ss_pred             CCCEEEEEcCCHHHHHHHHHHHHHCCCCeEEEEeCChhHHHHHHHcCCCEEEeCCCCcccHHHHHHHHHHHhCCCceEEE
Q 017868          181 PETNVLIMGAGPIGLVTMLGAPRAFGAPRIVIVDVDDYRLSVAKEIGADNIVKVSTNLQDIAEEVEKIQKAMGTGIDVSF  260 (365)
Q Consensus       181 ~g~~vlI~G~g~~G~~ai~~l~~~~g~~~vi~v~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~i~~~~~~~~~~~d~vi  260 (365)
                      .|.+|||.|+|.+|..-++ .+...|+ .+.+++...   +..+  +......     ..+.+.        -.++++|+
T Consensus         6 ~~~~vlVvGgG~va~~k~~-~Ll~~gA-~v~vis~~~---~~~~--~~i~~~~-----~~~~~~--------l~~~~lV~   65 (103)
T PF13241_consen    6 KGKRVLVVGGGPVAARKAR-LLLEAGA-KVTVISPEI---EFSE--GLIQLIR-----REFEED--------LDGADLVF   65 (103)
T ss_dssp             TT-EEEEEEESHHHHHHHH-HHCCCTB-EEEEEESSE---HHHH--TSCEEEE-----SS-GGG--------CTTESEEE
T ss_pred             CCCEEEEECCCHHHHHHHH-HHHhCCC-EEEEECCch---hhhh--hHHHHHh-----hhHHHH--------HhhheEEE
Confidence            5789999999999999999 6667798 566665553   2222  2222221     122111        35799999


Q ss_pred             eCCCCHHHHHHHHHhcccCCEEEEEcc
Q 017868          261 DCAGLNKTMSTALGATCAGGKVCLVGM  287 (365)
Q Consensus       261 d~~g~~~~~~~~~~~l~~~G~~~~~g~  287 (365)
                      .+++.+..-.......+..+..+....
T Consensus        66 ~at~d~~~n~~i~~~a~~~~i~vn~~D   92 (103)
T PF13241_consen   66 AATDDPELNEAIYADARARGILVNVVD   92 (103)
T ss_dssp             E-SS-HHHHHHHHHHHHHTTSEEEETT
T ss_pred             ecCCCHHHHHHHHHHHhhCCEEEEECC
Confidence            999987655566666666788777643

>PLN02366 spermidine synthase

Probab=94.90  E-value=0.26  Score=44.38  Aligned_cols=99  Identities=21%  Similarity=0.207  Sum_probs=62.4

Q ss_pred             CCCCEEEEEcCCHHHHHHHHHHHHHCCCCeEEEEeCChhHHHHHHHcCCC--------EEEeCCCCcccHHHHHHHHHHH
Q 017868          180 GPETNVLIMGAGPIGLVTMLGAPRAFGAPRIVIVDVDDYRLSVAKEIGAD--------NIVKVSTNLQDIAEEVEKIQKA  251 (365)
Q Consensus       180 ~~g~~vlI~G~g~~G~~ai~~l~~~~g~~~vi~v~~~~~~~~~~~~~g~~--------~~~~~~~~~~~~~~~i~~~~~~  251 (365)
                      ...++||+.|+|. |..+.. +++..+..++.+++.+++-.+.++++-..        .+-...   .|....+++.   
T Consensus        90 ~~pkrVLiIGgG~-G~~~re-llk~~~v~~V~~VEiD~~Vi~~ar~~f~~~~~~~~dpRv~vi~---~Da~~~l~~~---  161 (308)
T PLN02366         90 PNPKKVLVVGGGD-GGVLRE-IARHSSVEQIDICEIDKMVIDVSKKFFPDLAVGFDDPRVNLHI---GDGVEFLKNA---  161 (308)
T ss_pred             CCCCeEEEEcCCc-cHHHHH-HHhCCCCCeEEEEECCHHHHHHHHHhhhhhccccCCCceEEEE---ChHHHHHhhc---
Confidence            4568999998765 556666 66776777899999988878877763211        111111   1222223221   


Q ss_pred             hCCCceEEEeCCCC----------HHHHHHHHHhcccCCEEEEEc
Q 017868          252 MGTGIDVSFDCAGL----------NKTMSTALGATCAGGKVCLVG  286 (365)
Q Consensus       252 ~~~~~d~vid~~g~----------~~~~~~~~~~l~~~G~~~~~g  286 (365)
                      .++.+|+||--...          ...+..+.++|+++|.++..+
T Consensus       162 ~~~~yDvIi~D~~dp~~~~~~L~t~ef~~~~~~~L~pgGvlv~q~  206 (308)
T PLN02366        162 PEGTYDAIIVDSSDPVGPAQELFEKPFFESVARALRPGGVVCTQA  206 (308)
T ss_pred             cCCCCCEEEEcCCCCCCchhhhhHHHHHHHHHHhcCCCcEEEECc
Confidence            14579999763322          234667889999999998754

>PRK07063 short chain dehydrogenase; Provisional

Probab=94.89  E-value=0.25  Score=43.21  Aligned_cols=81  Identities=26%  Similarity=0.288  Sum_probs=48.3

Q ss_pred             CCCEEEEEcC-CHHHHHHHHHHHHHCCCCeEEEEeCChhHHH-HHHHc-----CCC-EEEeCCC-CcccHHHHHHHHHHH
Q 017868          181 PETNVLIMGA-GPIGLVTMLGAPRAFGAPRIVIVDVDDYRLS-VAKEI-----GAD-NIVKVST-NLQDIAEEVEKIQKA  251 (365)
Q Consensus       181 ~g~~vlI~G~-g~~G~~ai~~l~~~~g~~~vi~v~~~~~~~~-~~~~~-----g~~-~~~~~~~-~~~~~~~~i~~~~~~  251 (365)
                      .+.++||+|+ +++|.++++.++ ..|+ .|+.+++++++.+ ..+++     +.. ..+..+- +.+++...+.++.+.
T Consensus         6 ~~k~vlVtGas~gIG~~~a~~l~-~~G~-~vv~~~r~~~~~~~~~~~~~~~~~~~~~~~~~~Dl~~~~~~~~~~~~~~~~   83 (260)
T PRK07063          6 AGKVALVTGAAQGIGAAIARAFA-REGA-AVALADLDAALAERAAAAIARDVAGARVLAVPADVTDAASVAAAVAAAEEA   83 (260)
T ss_pred             CCCEEEEECCCchHHHHHHHHHH-HCCC-EEEEEeCCHHHHHHHHHHHHhccCCceEEEEEccCCCHHHHHHHHHHHHHH
Confidence            4678999987 999999999555 5698 4677777766544 22332     211 1222221 223333344443332


Q ss_pred             hCCCceEEEeCCC
Q 017868          252 MGTGIDVSFDCAG  264 (365)
Q Consensus       252 ~~~~~d~vid~~g  264 (365)
                       -+++|++|.+.|
T Consensus        84 -~g~id~li~~ag   95 (260)
T PRK07063         84 -FGPLDVLVNNAG   95 (260)
T ss_pred             -hCCCcEEEECCC
Confidence             357999999887

>PRK07984 enoyl-(acyl carrier protein) reductase; Provisional

Probab=94.89  E-value=0.33  Score=42.66  Aligned_cols=81  Identities=16%  Similarity=0.188  Sum_probs=46.2

Q ss_pred             CCCEEEEEcCC---HHHHHHHHHHHHHCCCCeEEEEeCChhHHHHHHH----cCCCEEEeCCC-CcccHHHHHHHHHHHh
Q 017868          181 PETNVLIMGAG---PIGLVTMLGAPRAFGAPRIVIVDVDDYRLSVAKE----IGADNIVKVST-NLQDIAEEVEKIQKAM  252 (365)
Q Consensus       181 ~g~~vlI~G~g---~~G~~ai~~l~~~~g~~~vi~v~~~~~~~~~~~~----~g~~~~~~~~~-~~~~~~~~i~~~~~~~  252 (365)
                      .+.++||+|++   ++|.++++.++ ..|++ |+.+.+++...+.+++    .+....+..+- +.++....+.+..+. 
T Consensus         5 ~~k~~lITGas~~~GIG~aia~~la-~~G~~-vil~~r~~~~~~~~~~~~~~~~~~~~~~~Dl~~~~~v~~~~~~~~~~-   81 (262)
T PRK07984          5 SGKRILVTGVASKLSIAYGIAQAMH-REGAE-LAFTYQNDKLKGRVEEFAAQLGSDIVLPCDVAEDASIDAMFAELGKV-   81 (262)
T ss_pred             CCCEEEEeCCCCCccHHHHHHHHHH-HCCCE-EEEEecchhHHHHHHHHHhccCCceEeecCCCCHHHHHHHHHHHHhh-
Confidence            46789999873   79999999555 56985 6666665321222222    23222232222 223444444444332 


Q ss_pred             CCCceEEEeCCC
Q 017868          253 GTGIDVSFDCAG  264 (365)
Q Consensus       253 ~~~~d~vid~~g  264 (365)
                      -+.+|++|.++|
T Consensus        82 ~g~iD~linnAg   93 (262)
T PRK07984         82 WPKFDGFVHSIG   93 (262)
T ss_pred             cCCCCEEEECCc
Confidence            357999999887

>PRK12481 2-deoxy-D-gluconate 3-dehydrogenase; Provisional

Probab=94.89  E-value=0.39  Score=41.82  Aligned_cols=81  Identities=22%  Similarity=0.280  Sum_probs=47.6

Q ss_pred             CCCEEEEEcC-CHHHHHHHHHHHHHCCCCeEEEEeCChh--HHHHHHHcCCCE-EEeCCC-CcccHHHHHHHHHHHhCCC
Q 017868          181 PETNVLIMGA-GPIGLVTMLGAPRAFGAPRIVIVDVDDY--RLSVAKEIGADN-IVKVST-NLQDIAEEVEKIQKAMGTG  255 (365)
Q Consensus       181 ~g~~vlI~G~-g~~G~~ai~~l~~~~g~~~vi~v~~~~~--~~~~~~~~g~~~-~~~~~~-~~~~~~~~i~~~~~~~~~~  255 (365)
                      ++.++||+|+ +++|.++++.++ ..|++ |+.+.+++.  ..+.+++.+... .+..+- +.++..+.+++..+. -++
T Consensus         7 ~~k~~lItGas~gIG~aia~~l~-~~G~~-vv~~~~~~~~~~~~~~~~~~~~~~~~~~Dl~~~~~~~~~~~~~~~~-~g~   83 (251)
T PRK12481          7 NGKVAIITGCNTGLGQGMAIGLA-KAGAD-IVGVGVAEAPETQAQVEALGRKFHFITADLIQQKDIDSIVSQAVEV-MGH   83 (251)
T ss_pred             CCCEEEEeCCCchHHHHHHHHHH-HCCCE-EEEecCchHHHHHHHHHHcCCeEEEEEeCCCCHHHHHHHHHHHHHH-cCC
Confidence            4688999987 999999999555 56995 555555432  123344455322 122222 223343444443332 357


Q ss_pred             ceEEEeCCC
Q 017868          256 IDVSFDCAG  264 (365)
Q Consensus       256 ~d~vid~~g  264 (365)
                      +|+++.+.|
T Consensus        84 iD~lv~~ag   92 (251)
T PRK12481         84 IDILINNAG   92 (251)
T ss_pred             CCEEEECCC
Confidence            999999887

>PRK12384 sorbitol-6-phosphate dehydrogenase; Provisional

Probab=94.88  E-value=0.34  Score=42.24  Aligned_cols=80  Identities=16%  Similarity=0.237  Sum_probs=46.2

Q ss_pred             CCEEEEEcC-CHHHHHHHHHHHHHCCCCeEEEEeCChhHHHH-HHH----cCCCE--EEeCCCC-cccHHHHHHHHHHHh
Q 017868          182 ETNVLIMGA-GPIGLVTMLGAPRAFGAPRIVIVDVDDYRLSV-AKE----IGADN--IVKVSTN-LQDIAEEVEKIQKAM  252 (365)
Q Consensus       182 g~~vlI~G~-g~~G~~ai~~l~~~~g~~~vi~v~~~~~~~~~-~~~----~g~~~--~~~~~~~-~~~~~~~i~~~~~~~  252 (365)
                      ++++||+|+ |.+|.+++..++ ..|+ .++.++++.++.+. ..+    .+...  .+..+-. .++....+.++.+. 
T Consensus         2 ~k~ilItG~~~~IG~~la~~l~-~~g~-~vi~~~r~~~~~~~~~~~~~~~~~~~~~~~~~~D~~~~~~i~~~~~~~~~~-   78 (259)
T PRK12384          2 NQVAVVIGGGQTLGAFLCHGLA-EEGY-RVAVADINSEKAANVAQEINAEYGEGMAYGFGADATSEQSVLALSRGVDEI-   78 (259)
T ss_pred             CCEEEEECCCcHHHHHHHHHHH-HCCC-EEEEEECCHHHHHHHHHHHHHhcCCceeEEEEccCCCHHHHHHHHHHHHHH-
Confidence            468999987 999999999555 5598 57777777654432 222    22111  2222222 22233333333222 


Q ss_pred             CCCceEEEeCCC
Q 017868          253 GTGIDVSFDCAG  264 (365)
Q Consensus       253 ~~~~d~vid~~g  264 (365)
                      -+++|+++.+.|
T Consensus        79 ~~~id~vv~~ag   90 (259)
T PRK12384         79 FGRVDLLVYNAG   90 (259)
T ss_pred             cCCCCEEEECCC
Confidence            257999999887

>PRK07035 short chain dehydrogenase; Provisional

Probab=94.88  E-value=0.37  Score=41.85  Aligned_cols=81  Identities=16%  Similarity=0.190  Sum_probs=47.8

Q ss_pred             CCCEEEEEcC-CHHHHHHHHHHHHHCCCCeEEEEeCChhHHHH-HHH---cCCC-EEEeCCC-CcccHHHHHHHHHHHhC
Q 017868          181 PETNVLIMGA-GPIGLVTMLGAPRAFGAPRIVIVDVDDYRLSV-AKE---IGAD-NIVKVST-NLQDIAEEVEKIQKAMG  253 (365)
Q Consensus       181 ~g~~vlI~G~-g~~G~~ai~~l~~~~g~~~vi~v~~~~~~~~~-~~~---~g~~-~~~~~~~-~~~~~~~~i~~~~~~~~  253 (365)
                      ++.++||+|+ +++|.++++.+ ...|+ +|+.++++.++.+. .++   .+.. ..+..+- +..+..+.+++..+. -
T Consensus         7 ~~k~vlItGas~gIG~~l~~~l-~~~G~-~Vi~~~r~~~~~~~~~~~~~~~~~~~~~~~~D~~~~~~~~~~~~~~~~~-~   83 (252)
T PRK07035          7 TGKIALVTGASRGIGEAIAKLL-AQQGA-HVIVSSRKLDGCQAVADAIVAAGGKAEALACHIGEMEQIDALFAHIRER-H   83 (252)
T ss_pred             CCCEEEEECCCcHHHHHHHHHH-HHCCC-EEEEEeCCHHHHHHHHHHHHhcCCeEEEEEcCCCCHHHHHHHHHHHHHH-c
Confidence            3568999987 99999999945 45698 67777777665432 232   2321 1222221 222333334443332 2


Q ss_pred             CCceEEEeCCC
Q 017868          254 TGIDVSFDCAG  264 (365)
Q Consensus       254 ~~~d~vid~~g  264 (365)
                      +.+|+++.+.|
T Consensus        84 ~~id~li~~ag   94 (252)
T PRK07035         84 GRLDILVNNAA   94 (252)
T ss_pred             CCCCEEEECCC
Confidence            46899998887

>PF00899 ThiF: ThiF family; InterPro: IPR000594 Ubiquitin-activating enzyme (E1 enzyme) [, ] activates ubiquitin by first adenylating with ATP its C-terminal glycine residue and thereafter linking this residue to the side chain of a cysteine residue in E1, yielding an ubiquitin-E1 thiolester and free AMP

Probab=94.88  E-value=0.48  Score=36.93  Aligned_cols=96  Identities=22%  Similarity=0.274  Sum_probs=55.0

Q ss_pred             CCEEEEEcCCHHHHHHHHHHHHHCCCCeEEEEeCCh-------------------hHH----HHHHHcC-CCEEEeCCCC
Q 017868          182 ETNVLIMGAGPIGLVTMLGAPRAFGAPRIVIVDVDD-------------------YRL----SVAKEIG-ADNIVKVSTN  237 (365)
Q Consensus       182 g~~vlI~G~g~~G~~ai~~l~~~~g~~~vi~v~~~~-------------------~~~----~~~~~~g-~~~~~~~~~~  237 (365)
                      ..+|+|.|+|++|..++..|+ ..|...+..+|.+.                   .|.    +.++++. ...+..+.. 
T Consensus         2 ~~~v~iiG~G~vGs~va~~L~-~~Gv~~i~lvD~d~v~~~nl~r~~~~~~~~vG~~Ka~~~~~~l~~~np~~~v~~~~~-   79 (135)
T PF00899_consen    2 NKRVLIIGAGGVGSEVAKNLA-RSGVGKITLVDDDIVEPSNLNRQFLYTEEDVGKNKAEAAKERLQEINPDVEVEAIPE-   79 (135)
T ss_dssp             T-EEEEESTSHHHHHHHHHHH-HHTTSEEEEEESSBB-GGGCCTCTTS-GGGTTSBHHHHHHHHHHHHSTTSEEEEEES-
T ss_pred             CCEEEEECcCHHHHHHHHHHH-HhCCCceeecCCcceeecccccccccccccchhHHHHHHHHHHHHhcCceeeeeeec-
Confidence            468999999999999999555 55998888886542                   122    2233333 222222211 


Q ss_pred             cccH-HHHHHHHHHHhCCCceEEEeCCCCHHHHHHHHHhcccCCEEEEE
Q 017868          238 LQDI-AEEVEKIQKAMGTGIDVSFDCAGLNKTMSTALGATCAGGKVCLV  285 (365)
Q Consensus       238 ~~~~-~~~i~~~~~~~~~~~d~vid~~g~~~~~~~~~~~l~~~G~~~~~  285 (365)
                        ++ .....++.    .++|+||+|+.+........+.+...+.-.+.
T Consensus        80 --~~~~~~~~~~~----~~~d~vi~~~d~~~~~~~l~~~~~~~~~p~i~  122 (135)
T PF00899_consen   80 --KIDEENIEELL----KDYDIVIDCVDSLAARLLLNEICREYGIPFID  122 (135)
T ss_dssp             --HCSHHHHHHHH----HTSSEEEEESSSHHHHHHHHHHHHHTT-EEEE
T ss_pred             --ccccccccccc----cCCCEEEEecCCHHHHHHHHHHHHHcCCCEEE
Confidence              11 12233332    47899999998765544555555555554433

Later the ubiquitin moiety is transferred to a cysteine residue on one of the many forms of ubiquitin- conjugating enzymes (E2). The family of ubiquitin-activating enzymes shares in its catalytic domain significant similarity with a large family of NAD/FAD-binding proteins. This domain is based on the common NAD/FAD-binding fold and finds members of several families, including UBA ubiquitin activating enzymes; the hesA/moeB/thiF family; NADH peroxidases; the LDH family; sarcosin oxidase; phytoene dehydrogenases; alanine dehydrogenases; hydroxyacyl-CoA dehydrogenases and many other NAD/FAD dependent dehydrogenases and oxidases.; GO: 0003824 catalytic activity; PDB: 1ZKM_D 1ZUD_3 1ZFN_D 1R4M_G 2NVU_A 1R4N_C 3DBR_A 3DBH_C 3DBL_G 1YOV_A ....

>PRK08226 short chain dehydrogenase; Provisional

Probab=94.86  E-value=0.37  Score=42.12  Aligned_cols=81  Identities=22%  Similarity=0.282  Sum_probs=47.3

Q ss_pred             CCCEEEEEcC-CHHHHHHHHHHHHHCCCCeEEEEeCChhHHHHHHH---cCCCE-EEeCCCC-cccHHHHHHHHHHHhCC
Q 017868          181 PETNVLIMGA-GPIGLVTMLGAPRAFGAPRIVIVDVDDYRLSVAKE---IGADN-IVKVSTN-LQDIAEEVEKIQKAMGT  254 (365)
Q Consensus       181 ~g~~vlI~G~-g~~G~~ai~~l~~~~g~~~vi~v~~~~~~~~~~~~---~g~~~-~~~~~~~-~~~~~~~i~~~~~~~~~  254 (365)
                      .+.++||+|+ |++|..+++.++ ..|+ .|+.++++++..+.+++   .+... .+..+-. ..+....+.++.+. .+
T Consensus         5 ~~~~~lItG~s~giG~~la~~l~-~~G~-~Vv~~~r~~~~~~~~~~~~~~~~~~~~~~~Dl~~~~~v~~~~~~~~~~-~~   81 (263)
T PRK08226          5 TGKTALITGALQGIGEGIARVFA-RHGA-NLILLDISPEIEKLADELCGRGHRCTAVVADVRDPASVAAAIKRAKEK-EG   81 (263)
T ss_pred             CCCEEEEeCCCChHHHHHHHHHH-HCCC-EEEEecCCHHHHHHHHHHHHhCCceEEEECCCCCHHHHHHHHHHHHHH-cC
Confidence            4678999987 999999999554 5699 47777776654333332   23221 2222221 12233333333222 35


Q ss_pred             CceEEEeCCC
Q 017868          255 GIDVSFDCAG  264 (365)
Q Consensus       255 ~~d~vid~~g  264 (365)
                      ++|++|.+.|
T Consensus        82 ~id~vi~~ag   91 (263)
T PRK08226         82 RIDILVNNAG   91 (263)
T ss_pred             CCCEEEECCC
Confidence            7999999887

>PRK05690 molybdopterin biosynthesis protein MoeB; Provisional

Probab=94.86  E-value=0.56  Score=40.76  Aligned_cols=35  Identities=29%  Similarity=0.447  Sum_probs=28.5

Q ss_pred             CCCEEEEEcCCHHHHHHHHHHHHHCCCCeEEEEeCC
Q 017868          181 PETNVLIMGAGPIGLVTMLGAPRAFGAPRIVIVDVD  216 (365)
Q Consensus       181 ~g~~vlI~G~g~~G~~ai~~l~~~~g~~~vi~v~~~  216 (365)
                      ...+|+|.|+|++|..++. .+...|..++..+|.+
T Consensus        31 ~~~~VliiG~GglGs~va~-~La~~Gvg~i~lvD~D   65 (245)
T PRK05690         31 KAARVLVVGLGGLGCAASQ-YLAAAGVGTLTLVDFD   65 (245)
T ss_pred             cCCeEEEECCCHHHHHHHH-HHHHcCCCEEEEEcCC
Confidence            4468999999999999999 5556799888888654

>PRK06953 short chain dehydrogenase; Provisional

Probab=94.84  E-value=0.25  Score=42.11  Aligned_cols=77  Identities=26%  Similarity=0.332  Sum_probs=47.3

Q ss_pred             CEEEEEcC-CHHHHHHHHHHHHHCCCCeEEEEeCChhHHHHHHHcCCCEEEeCCCCcccHHHHHHHHH-HHhCCCceEEE
Q 017868          183 TNVLIMGA-GPIGLVTMLGAPRAFGAPRIVIVDVDDYRLSVAKEIGADNIVKVSTNLQDIAEEVEKIQ-KAMGTGIDVSF  260 (365)
Q Consensus       183 ~~vlI~G~-g~~G~~ai~~l~~~~g~~~vi~v~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~i~~~~-~~~~~~~d~vi  260 (365)
                      +++||+|+ |.+|..+++.++ ..|+ .++.++++.++.+.++..+... +..+-.+.+   .+.++. +..+.++|+++
T Consensus         2 ~~vlvtG~sg~iG~~la~~L~-~~G~-~v~~~~r~~~~~~~~~~~~~~~-~~~D~~~~~---~v~~~~~~~~~~~~d~vi   75 (222)
T PRK06953          2 KTVLIVGASRGIGREFVRQYR-ADGW-RVIATARDAAALAALQALGAEA-LALDVADPA---SVAGLAWKLDGEALDAAV   75 (222)
T ss_pred             ceEEEEcCCCchhHHHHHHHH-hCCC-EEEEEECCHHHHHHHHhccceE-EEecCCCHH---HHHHHHHHhcCCCCCEEE
Confidence            46899987 999999999554 5588 4777778777766666555432 222222121   222221 11235799999


Q ss_pred             eCCCC
Q 017868          261 DCAGL  265 (365)
Q Consensus       261 d~~g~  265 (365)
                      .+.|.
T Consensus        76 ~~ag~   80 (222)
T PRK06953         76 YVAGV   80 (222)
T ss_pred             ECCCc
Confidence            98764

>KOG1200 consensus Mitochondrial/plastidial beta-ketoacyl-ACP reductase [Lipid transport and metabolism]

Probab=94.84  E-value=0.3  Score=40.09  Aligned_cols=80  Identities=20%  Similarity=0.359  Sum_probs=49.2

Q ss_pred             CEEEEEcC-CHHHHHHHHHHHHHCCCCeEEEEeCCh-hHHHHHHHcCCC--EE-EeCC-CCcccHHHHHHHHHHHhCCCc
Q 017868          183 TNVLIMGA-GPIGLVTMLGAPRAFGAPRIVIVDVDD-YRLSVAKEIGAD--NI-VKVS-TNLQDIAEEVEKIQKAMGTGI  256 (365)
Q Consensus       183 ~~vlI~G~-g~~G~~ai~~l~~~~g~~~vi~v~~~~-~~~~~~~~~g~~--~~-~~~~-~~~~~~~~~i~~~~~~~~~~~  256 (365)
                      ...+|.|+ +++|.+..|+++ ..|++ +++.+.+. ...+.++.++..  +. +..+ ++..+....+++..+.. +.+
T Consensus        15 k~~~vtGg~sGIGrAia~~la-~~Gar-v~v~dl~~~~A~ata~~L~g~~~h~aF~~DVS~a~~v~~~l~e~~k~~-g~p   91 (256)
T KOG1200|consen   15 KVAAVTGGSSGIGRAIAQLLA-KKGAR-VAVADLDSAAAEATAGDLGGYGDHSAFSCDVSKAHDVQNTLEEMEKSL-GTP   91 (256)
T ss_pred             ceeEEecCCchHHHHHHHHHH-hcCcE-EEEeecchhhHHHHHhhcCCCCccceeeeccCcHHHHHHHHHHHHHhc-CCC
Confidence            35567776 899999999555 55994 66665554 445567888762  21 1111 22234333455554433 489


Q ss_pred             eEEEeCCCC
Q 017868          257 DVSFDCAGL  265 (365)
Q Consensus       257 d~vid~~g~  265 (365)
                      +++++|.|.
T Consensus        92 svlVncAGI  100 (256)
T KOG1200|consen   92 SVLVNCAGI  100 (256)
T ss_pred             cEEEEcCcc
Confidence            999999994

>PRK07454 short chain dehydrogenase; Provisional

Probab=94.83  E-value=0.48  Score=40.79  Aligned_cols=83  Identities=23%  Similarity=0.262  Sum_probs=48.8

Q ss_pred             CCCCEEEEEcC-CHHHHHHHHHHHHHCCCCeEEEEeCChhHHHHH-H---HcCCCE-EEeCCC-CcccHHHHHHHHHHHh
Q 017868          180 GPETNVLIMGA-GPIGLVTMLGAPRAFGAPRIVIVDVDDYRLSVA-K---EIGADN-IVKVST-NLQDIAEEVEKIQKAM  252 (365)
Q Consensus       180 ~~g~~vlI~G~-g~~G~~ai~~l~~~~g~~~vi~v~~~~~~~~~~-~---~~g~~~-~~~~~~-~~~~~~~~i~~~~~~~  252 (365)
                      ..+.++||+|+ |.+|..++..++ ..|. +|+++++++++.+.+ +   +.+... .+..+- +.+++...++.+.+. 
T Consensus         4 ~~~k~vlItG~sg~iG~~la~~l~-~~G~-~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~D~~~~~~~~~~~~~~~~~-   80 (241)
T PRK07454          4 NSMPRALITGASSGIGKATALAFA-KAGW-DLALVARSQDALEALAAELRSTGVKAAAYSIDLSNPEAIAPGIAELLEQ-   80 (241)
T ss_pred             CCCCEEEEeCCCchHHHHHHHHHH-HCCC-EEEEEeCCHHHHHHHHHHHHhCCCcEEEEEccCCCHHHHHHHHHHHHHH-
Confidence            34578999987 999999999554 5688 577777776654332 2   223221 222222 122333333333322 


Q ss_pred             CCCceEEEeCCCC
Q 017868          253 GTGIDVSFDCAGL  265 (365)
Q Consensus       253 ~~~~d~vid~~g~  265 (365)
                      -+++|+++.+.|.
T Consensus        81 ~~~id~lv~~ag~   93 (241)
T PRK07454         81 FGCPDVLINNAGM   93 (241)
T ss_pred             cCCCCEEEECCCc
Confidence            3469999998873

>PRK08264 short chain dehydrogenase; Validated

Probab=94.83  E-value=0.17  Score=43.56  Aligned_cols=77  Identities=21%  Similarity=0.271  Sum_probs=45.8

Q ss_pred             CCCEEEEEcC-CHHHHHHHHHHHHHCCCCeEEEEeCChhHHHHHHHcCCC-EEEeCCCCcccHHHHHHHHHHHhCCCceE
Q 017868          181 PETNVLIMGA-GPIGLVTMLGAPRAFGAPRIVIVDVDDYRLSVAKEIGAD-NIVKVSTNLQDIAEEVEKIQKAMGTGIDV  258 (365)
Q Consensus       181 ~g~~vlI~G~-g~~G~~ai~~l~~~~g~~~vi~v~~~~~~~~~~~~~g~~-~~~~~~~~~~~~~~~i~~~~~~~~~~~d~  258 (365)
                      .+.++||+|+ |.+|..+++.+ ...|+++|+.+.++.++.+.   .+.. ..+..+-.  +. +.+++..+. -..+|+
T Consensus         5 ~~~~vlItGgsg~iG~~la~~l-~~~G~~~V~~~~r~~~~~~~---~~~~~~~~~~D~~--~~-~~~~~~~~~-~~~id~   76 (238)
T PRK08264          5 KGKVVLVTGANRGIGRAFVEQL-LARGAAKVYAAARDPESVTD---LGPRVVPLQLDVT--DP-ASVAAAAEA-ASDVTI   76 (238)
T ss_pred             CCCEEEEECCCchHHHHHHHHH-HHCCcccEEEEecChhhhhh---cCCceEEEEecCC--CH-HHHHHHHHh-cCCCCE
Confidence            4578999987 99999999945 45688557777776665432   2221 11221211  11 223333321 246899


Q ss_pred             EEeCCCC
Q 017868          259 SFDCAGL  265 (365)
Q Consensus       259 vid~~g~  265 (365)
                      +|.+.|.
T Consensus        77 vi~~ag~   83 (238)
T PRK08264         77 LVNNAGI   83 (238)
T ss_pred             EEECCCc
Confidence            9998875

>PLN02253 xanthoxin dehydrogenase

Probab=94.82  E-value=0.29  Score=43.35  Aligned_cols=82  Identities=22%  Similarity=0.252  Sum_probs=48.4

Q ss_pred             CCCEEEEEcC-CHHHHHHHHHHHHHCCCCeEEEEeCChhHHH-HHHHcCC---CEEEeCCC-CcccHHHHHHHHHHHhCC
Q 017868          181 PETNVLIMGA-GPIGLVTMLGAPRAFGAPRIVIVDVDDYRLS-VAKEIGA---DNIVKVST-NLQDIAEEVEKIQKAMGT  254 (365)
Q Consensus       181 ~g~~vlI~G~-g~~G~~ai~~l~~~~g~~~vi~v~~~~~~~~-~~~~~g~---~~~~~~~~-~~~~~~~~i~~~~~~~~~  254 (365)
                      .+.++||+|+ |++|.++++.++ ..|+ .|+.+++++++.+ ..++++.   ...+..+- +.++..+.+....+. -+
T Consensus        17 ~~k~~lItGas~gIG~~la~~l~-~~G~-~v~~~~~~~~~~~~~~~~~~~~~~~~~~~~Dl~d~~~~~~~~~~~~~~-~g   93 (280)
T PLN02253         17 LGKVALVTGGATGIGESIVRLFH-KHGA-KVCIVDLQDDLGQNVCDSLGGEPNVCFFHCDVTVEDDVSRAVDFTVDK-FG   93 (280)
T ss_pred             CCCEEEEECCCchHHHHHHHHHH-HcCC-EEEEEeCCHHHHHHHHHHhcCCCceEEEEeecCCHHHHHHHHHHHHHH-hC
Confidence            4678999987 999999999555 5698 5677766655433 3344432   11222221 223333334443332 35


Q ss_pred             CceEEEeCCCC
Q 017868          255 GIDVSFDCAGL  265 (365)
Q Consensus       255 ~~d~vid~~g~  265 (365)
                      ++|++|.++|.
T Consensus        94 ~id~li~~Ag~  104 (280)
T PLN02253         94 TLDIMVNNAGL  104 (280)
T ss_pred             CCCEEEECCCc
Confidence            79999998873

>PRK06935 2-deoxy-D-gluconate 3-dehydrogenase; Provisional

Probab=94.80  E-value=0.38  Score=41.97  Aligned_cols=82  Identities=17%  Similarity=0.196  Sum_probs=46.7

Q ss_pred             CCCEEEEEcC-CHHHHHHHHHHHHHCCCCeEEEEeCChhHHH---HHHHcCCC-EEEeCCCC-cccHHHHHHHHHHHhCC
Q 017868          181 PETNVLIMGA-GPIGLVTMLGAPRAFGAPRIVIVDVDDYRLS---VAKEIGAD-NIVKVSTN-LQDIAEEVEKIQKAMGT  254 (365)
Q Consensus       181 ~g~~vlI~G~-g~~G~~ai~~l~~~~g~~~vi~v~~~~~~~~---~~~~~g~~-~~~~~~~~-~~~~~~~i~~~~~~~~~  254 (365)
                      .+.++||+|+ +++|.++++.++ ..|++ ++.+.++++..+   ...+.+.. ..+..+-. .++....+.+..+. .+
T Consensus        14 ~~k~vlItGas~gIG~~ia~~l~-~~G~~-v~~~~~~~~~~~~~~~~~~~~~~~~~~~~D~~~~~~i~~~~~~~~~~-~g   90 (258)
T PRK06935         14 DGKVAIVTGGNTGLGQGYAVALA-KAGAD-IIITTHGTNWDETRRLIEKEGRKVTFVQVDLTKPESAEKVVKEALEE-FG   90 (258)
T ss_pred             CCCEEEEeCCCchHHHHHHHHHH-HCCCE-EEEEeCCcHHHHHHHHHHhcCCceEEEEcCCCCHHHHHHHHHHHHHH-cC
Confidence            5789999987 999999999555 56995 555555532222   23333432 12222222 22333334443332 35


Q ss_pred             CceEEEeCCCC
Q 017868          255 GIDVSFDCAGL  265 (365)
Q Consensus       255 ~~d~vid~~g~  265 (365)
                      ++|++|.+.|.
T Consensus        91 ~id~li~~ag~  101 (258)
T PRK06935         91 KIDILVNNAGT  101 (258)
T ss_pred             CCCEEEECCCC
Confidence            79999998873

>PRK04266 fibrillarin; Provisional

Probab=94.80  E-value=0.82  Score=39.19  Aligned_cols=102  Identities=15%  Similarity=0.125  Sum_probs=59.0

Q ss_pred             HhcCCCCCCEEEEEcCCHHHHHHHHHHHHHCCCCeEEEEeCChhHHHHH----HHcCCCEEEeCCCCcccHHHHHHHHHH
Q 017868          175 RRANIGPETNVLIMGAGPIGLVTMLGAPRAFGAPRIVIVDVDDYRLSVA----KEIGADNIVKVSTNLQDIAEEVEKIQK  250 (365)
Q Consensus       175 ~~~~~~~g~~vlI~G~g~~G~~ai~~l~~~~g~~~vi~v~~~~~~~~~~----~~~g~~~~~~~~~~~~~~~~~i~~~~~  250 (365)
                      +...+++|++||=.|+|. |..+.. +++..+...|++++.+++..+.+    ++..-...+.  .+..+. .....+  
T Consensus        66 ~~l~i~~g~~VlD~G~G~-G~~~~~-la~~v~~g~V~avD~~~~ml~~l~~~a~~~~nv~~i~--~D~~~~-~~~~~l--  138 (226)
T PRK04266         66 KNFPIKKGSKVLYLGAAS-GTTVSH-VSDIVEEGVVYAVEFAPRPMRELLEVAEERKNIIPIL--ADARKP-ERYAHV--  138 (226)
T ss_pred             hhCCCCCCCEEEEEccCC-CHHHHH-HHHhcCCCeEEEEECCHHHHHHHHHHhhhcCCcEEEE--CCCCCc-chhhhc--
Confidence            457889999998888743 444444 55555434799999998766533    2221111221  111111 000111  


Q ss_pred             HhCCCceEEEeCCCCHH----HHHHHHHhcccCCEEEEE
Q 017868          251 AMGTGIDVSFDCAGLNK----TMSTALGATCAGGKVCLV  285 (365)
Q Consensus       251 ~~~~~~d~vid~~g~~~----~~~~~~~~l~~~G~~~~~  285 (365)
                        ...+|+++.....+.    .+..+.+.|+++|++++.
T Consensus       139 --~~~~D~i~~d~~~p~~~~~~L~~~~r~LKpGG~lvI~  175 (226)
T PRK04266        139 --VEKVDVIYQDVAQPNQAEIAIDNAEFFLKDGGYLLLA  175 (226)
T ss_pred             --cccCCEEEECCCChhHHHHHHHHHHHhcCCCcEEEEE
Confidence              245999985444321    356788899999999874

>PLN03075 nicotianamine synthase; Provisional

Probab=94.80  E-value=0.27  Score=43.68  Aligned_cols=100  Identities=21%  Similarity=0.250  Sum_probs=64.8

Q ss_pred             CCCCEEEEEcCCHHHHHHHHHHHHHCCCCeEEEEeCChhHHHHHHHcC-----CCEEEeCCCCcccHHHHHHHHHHHhCC
Q 017868          180 GPETNVLIMGAGPIGLVTMLGAPRAFGAPRIVIVDVDDYRLSVAKEIG-----ADNIVKVSTNLQDIAEEVEKIQKAMGT  254 (365)
Q Consensus       180 ~~g~~vlI~G~g~~G~~ai~~l~~~~g~~~vi~v~~~~~~~~~~~~~g-----~~~~~~~~~~~~~~~~~i~~~~~~~~~  254 (365)
                      .+.++|+-.|+|+.+..++.++++......++++|.+++..+.+++.-     ...-+.+..  .|..+    ... ...
T Consensus       122 ~~p~~VldIGcGpgpltaiilaa~~~p~~~~~giD~d~~ai~~Ar~~~~~~~gL~~rV~F~~--~Da~~----~~~-~l~  194 (296)
T PLN03075        122 GVPTKVAFVGSGPLPLTSIVLAKHHLPTTSFHNFDIDPSANDVARRLVSSDPDLSKRMFFHT--ADVMD----VTE-SLK  194 (296)
T ss_pred             CCCCEEEEECCCCcHHHHHHHHHhcCCCCEEEEEeCCHHHHHHHHHHhhhccCccCCcEEEE--Cchhh----ccc-ccC
Confidence            377899999999888877774545555557999999998887776633     212111111  11111    110 136


Q ss_pred             CceEEEeCC-------CCHHHHHHHHHhcccCCEEEEEc
Q 017868          255 GIDVSFDCA-------GLNKTMSTALGATCAGGKVCLVG  286 (365)
Q Consensus       255 ~~d~vid~~-------g~~~~~~~~~~~l~~~G~~~~~g  286 (365)
                      ++|+|+-.+       .-...+.+..+.|+++|.++.-.
T Consensus       195 ~FDlVF~~ALi~~dk~~k~~vL~~l~~~LkPGG~Lvlr~  233 (296)
T PLN03075        195 EYDVVFLAALVGMDKEEKVKVIEHLGKHMAPGALLMLRS  233 (296)
T ss_pred             CcCEEEEecccccccccHHHHHHHHHHhcCCCcEEEEec
Confidence            799998764       22346678889999999988653

>TIGR00417 speE spermidine synthase

Probab=94.79  E-value=0.61  Score=41.20  Aligned_cols=98  Identities=15%  Similarity=0.122  Sum_probs=59.6

Q ss_pred             CCCCEEEEEcCCHHHHHHHHHHHHHCCCCeEEEEeCChhHHHHHHHcC-C-------CEEEeCCCCcccHHHHHHHHHHH
Q 017868          180 GPETNVLIMGAGPIGLVTMLGAPRAFGAPRIVIVDVDDYRLSVAKEIG-A-------DNIVKVSTNLQDIAEEVEKIQKA  251 (365)
Q Consensus       180 ~~g~~vlI~G~g~~G~~ai~~l~~~~g~~~vi~v~~~~~~~~~~~~~g-~-------~~~~~~~~~~~~~~~~i~~~~~~  251 (365)
                      ...++||+.|+|. |..+.. +++......+.+++.+++-.+.++++- .       ..+....   .|..+.++.    
T Consensus        71 ~~p~~VL~iG~G~-G~~~~~-ll~~~~~~~v~~veid~~vi~~a~~~~~~~~~~~~~~~v~i~~---~D~~~~l~~----  141 (270)
T TIGR00417        71 PNPKHVLVIGGGD-GGVLRE-VLKHKSVEKATLVDIDEKVIELSKKFLPSLAGSYDDPRVDLQI---DDGFKFLAD----  141 (270)
T ss_pred             CCCCEEEEEcCCc-hHHHHH-HHhCCCcceEEEEeCCHHHHHHHHHHhHhhcccccCCceEEEE---CchHHHHHh----
Confidence            3456999998755 445555 555655678999999888777766531 1       1111100   222222322    


Q ss_pred             hCCCceEEEeCCC----------CHHHHHHHHHhcccCCEEEEEc
Q 017868          252 MGTGIDVSFDCAG----------LNKTMSTALGATCAGGKVCLVG  286 (365)
Q Consensus       252 ~~~~~d~vid~~g----------~~~~~~~~~~~l~~~G~~~~~g  286 (365)
                      ....+|+||-...          ....+..+.+.|+++|.++...
T Consensus       142 ~~~~yDvIi~D~~~~~~~~~~l~~~ef~~~~~~~L~pgG~lv~~~  186 (270)
T TIGR00417       142 TENTFDVIIVDSTDPVGPAETLFTKEFYELLKKALNEDGIFVAQS  186 (270)
T ss_pred             CCCCccEEEEeCCCCCCcccchhHHHHHHHHHHHhCCCcEEEEcC
Confidence            2568999975322          1234567889999999998763

the SpeE subunit of spermidine synthase catalysesthe reaction (putrescine + S-adenosylmethioninamine = spermidine + 5'-methylthioadenosine) and is involved in polyamine biosynthesis and in the biosynthesis of spermidine from arganine. The region between residues 77 and 120 of the seed alignment is thought to be involved in binding to decarboxylated SAM.

>PLN02819 lysine-ketoglutarate reductase/saccharopine dehydrogenase

Probab=94.78  E-value=0.42  Score=49.92  Aligned_cols=138  Identities=12%  Similarity=0.102  Sum_probs=78.0

Q ss_pred             CCCEEEEEcCCHHHHHHHHHHHHHCCCC------------eEEEEeCChhHHH-HHHHc-CCCEEEeCCCCcccHHHHHH
Q 017868          181 PETNVLIMGAGPIGLVTMLGAPRAFGAP------------RIVIVDVDDYRLS-VAKEI-GADNIVKVSTNLQDIAEEVE  246 (365)
Q Consensus       181 ~g~~vlI~G~g~~G~~ai~~l~~~~g~~------------~vi~v~~~~~~~~-~~~~~-g~~~~~~~~~~~~~~~~~i~  246 (365)
                      ...+|+|+|+|.+|...+..+++..+++            .|.+++.+.++.+ +++.+ ++..+.. +  ..+.. .+.
T Consensus       568 ~~~rIlVLGAG~VG~~~a~~La~~~~~~~~~~~~~~~~~~lV~VaD~~~~~a~~la~~~~~~~~v~l-D--v~D~e-~L~  643 (1042)
T PLN02819        568 KSQNVLILGAGRVCRPAAEYLASVKTISYYGDDSEEPTDVHVIVASLYLKDAKETVEGIENAEAVQL-D--VSDSE-SLL  643 (1042)
T ss_pred             cCCcEEEECCCHHHHHHHHHHHhCcCccccccccccccccEEEEECCCHHHHHHHHHhcCCCceEEe-e--cCCHH-HHH
Confidence            4568999999999999999676655543            3666666666655 44545 4333221 1  12332 232


Q ss_pred             HHHHHhCCCceEEEeCCCCHHHHHHHHHhcccCCEEEEEccCCCCccccchHhhhcCcEEEeecccCCcHHH--HHHHHH
Q 017868          247 KIQKAMGTGIDVSFDCAGLNKTMSTALGATCAGGKVCLVGMGHHEMTVPLTPAAVREVDVVGVFRYKNTWPL--CLELLR  324 (365)
Q Consensus       247 ~~~~~~~~~~d~vid~~g~~~~~~~~~~~l~~~G~~~~~g~~~~~~~~~~~~~~~~~~~i~~~~~~~~~~~~--~~~~l~  324 (365)
                      ++.    .++|+|+.|+...-+...+..++..+=+++................-..++.+........-+..  +.++++
T Consensus       644 ~~v----~~~DaVIsalP~~~H~~VAkaAieaGkHvv~eky~~~e~~~L~e~Ak~AGV~~m~e~GlDPGid~~lA~~~Id  719 (1042)
T PLN02819        644 KYV----SQVDVVISLLPASCHAVVAKACIELKKHLVTASYVSEEMSALDSKAKEAGITILCEMGLDPGIDHMMAMKMID  719 (1042)
T ss_pred             Hhh----cCCCEEEECCCchhhHHHHHHHHHcCCCEEECcCCHHHHHHHHHHHHHcCCEEEECCccCHHHHHHHHHHHHH
Confidence            221    35999999999876777777788777666655321111111111223355555554444333333  445555


Q ss_pred             cC
Q 017868          325 SG  326 (365)
Q Consensus       325 ~g  326 (365)
                      ++
T Consensus       720 ~~  721 (1042)
T PLN02819        720 DA  721 (1042)
T ss_pred             hh
Confidence            54

>PRK05875 short chain dehydrogenase; Provisional

Probab=94.78  E-value=0.4  Score=42.32  Aligned_cols=81  Identities=23%  Similarity=0.315  Sum_probs=47.1

Q ss_pred             CCCEEEEEcC-CHHHHHHHHHHHHHCCCCeEEEEeCChhHHH-HHHHcC-----C-CEEEeCCC-CcccHHHHHHHHHHH
Q 017868          181 PETNVLIMGA-GPIGLVTMLGAPRAFGAPRIVIVDVDDYRLS-VAKEIG-----A-DNIVKVST-NLQDIAEEVEKIQKA  251 (365)
Q Consensus       181 ~g~~vlI~G~-g~~G~~ai~~l~~~~g~~~vi~v~~~~~~~~-~~~~~g-----~-~~~~~~~~-~~~~~~~~i~~~~~~  251 (365)
                      ++.++||+|+ |.+|.++++.+ ...|+ .|+.+.++.++.+ ..+++.     . ...+..+- +.+++.+.+++..+.
T Consensus         6 ~~k~vlItGasg~IG~~la~~l-~~~G~-~V~~~~r~~~~~~~~~~~l~~~~~~~~~~~~~~Dl~~~~~~~~~~~~~~~~   83 (276)
T PRK05875          6 QDRTYLVTGGGSGIGKGVAAGL-VAAGA-AVMIVGRNPDKLAAAAEEIEALKGAGAVRYEPADVTDEDQVARAVDAATAW   83 (276)
T ss_pred             CCCEEEEECCCcHHHHHHHHHH-HHCCC-eEEEEeCCHHHHHHHHHHHHhccCCCceEEEEcCCCCHHHHHHHHHHHHHH
Confidence            3679999987 99999999944 55699 5777777765543 222221     1 11221221 122333333333322


Q ss_pred             hCCCceEEEeCCC
Q 017868          252 MGTGIDVSFDCAG  264 (365)
Q Consensus       252 ~~~~~d~vid~~g  264 (365)
                       .+++|++|.+.|
T Consensus        84 -~~~~d~li~~ag   95 (276)
T PRK05875         84 -HGRLHGVVHCAG   95 (276)
T ss_pred             -cCCCCEEEECCC
Confidence             357899999887

>PRK06138 short chain dehydrogenase; Provisional

Probab=94.78  E-value=0.31  Score=42.24  Aligned_cols=82  Identities=24%  Similarity=0.253  Sum_probs=47.7

Q ss_pred             CCCEEEEEcC-CHHHHHHHHHHHHHCCCCeEEEEeCChhHHH-HHHHc--CCC-EEEeCCCCc-ccHHHHHHHHHHHhCC
Q 017868          181 PETNVLIMGA-GPIGLVTMLGAPRAFGAPRIVIVDVDDYRLS-VAKEI--GAD-NIVKVSTNL-QDIAEEVEKIQKAMGT  254 (365)
Q Consensus       181 ~g~~vlI~G~-g~~G~~ai~~l~~~~g~~~vi~v~~~~~~~~-~~~~~--g~~-~~~~~~~~~-~~~~~~i~~~~~~~~~  254 (365)
                      ++.++||+|+ |.+|..+++.++ ..|+ +++.+.++.++.+ ..+.+  +.. ..+..+-.+ ++..+.+..+.+. .+
T Consensus         4 ~~k~~lItG~sg~iG~~la~~l~-~~G~-~v~~~~r~~~~~~~~~~~~~~~~~~~~~~~D~~~~~~~~~~~~~i~~~-~~   80 (252)
T PRK06138          4 AGRVAIVTGAGSGIGRATAKLFA-REGA-RVVVADRDAEAAERVAAAIAAGGRAFARQGDVGSAEAVEALVDFVAAR-WG   80 (252)
T ss_pred             CCcEEEEeCCCchHHHHHHHHHH-HCCC-eEEEecCCHHHHHHHHHHHhcCCeEEEEEcCCCCHHHHHHHHHHHHHH-cC
Confidence            3568999987 999999999555 4588 5777767665443 23332  221 222222222 2233333333322 35


Q ss_pred             CceEEEeCCCC
Q 017868          255 GIDVSFDCAGL  265 (365)
Q Consensus       255 ~~d~vid~~g~  265 (365)
                      ++|++|.+.|.
T Consensus        81 ~id~vi~~ag~   91 (252)
T PRK06138         81 RLDVLVNNAGF   91 (252)
T ss_pred             CCCEEEECCCC
Confidence            89999998883

>PRK08277 D-mannonate oxidoreductase; Provisional

Probab=94.77  E-value=0.39  Score=42.45  Aligned_cols=81  Identities=21%  Similarity=0.283  Sum_probs=47.5

Q ss_pred             CCCEEEEEcC-CHHHHHHHHHHHHHCCCCeEEEEeCChhHHH-HHHH---cCCC-EEEeCCCC-cccHHHHHHHHHHHhC
Q 017868          181 PETNVLIMGA-GPIGLVTMLGAPRAFGAPRIVIVDVDDYRLS-VAKE---IGAD-NIVKVSTN-LQDIAEEVEKIQKAMG  253 (365)
Q Consensus       181 ~g~~vlI~G~-g~~G~~ai~~l~~~~g~~~vi~v~~~~~~~~-~~~~---~g~~-~~~~~~~~-~~~~~~~i~~~~~~~~  253 (365)
                      ++.++||+|+ +++|.+++..++ ..|+ .|+.+++++++.+ +.++   .+.. ..+..+-. ..+....+.++.+. -
T Consensus         9 ~~k~vlVtGas~giG~~ia~~l~-~~G~-~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~Dl~~~~~v~~~~~~~~~~-~   85 (278)
T PRK08277          9 KGKVAVITGGGGVLGGAMAKELA-RAGA-KVAILDRNQEKAEAVVAEIKAAGGEALAVKADVLDKESLEQARQQILED-F   85 (278)
T ss_pred             CCCEEEEeCCCchHHHHHHHHHH-HCCC-EEEEEeCCHHHHHHHHHHHHhcCCeEEEEECCCCCHHHHHHHHHHHHHH-c
Confidence            4678999987 999999999554 5699 5677777665443 2232   2322 12222221 12233333333322 3


Q ss_pred             CCceEEEeCCC
Q 017868          254 TGIDVSFDCAG  264 (365)
Q Consensus       254 ~~~d~vid~~g  264 (365)
                      +++|++|.++|
T Consensus        86 g~id~li~~ag   96 (278)
T PRK08277         86 GPCDILINGAG   96 (278)
T ss_pred             CCCCEEEECCC
Confidence            57999999887

>PRK07576 short chain dehydrogenase; Provisional

Probab=94.75  E-value=0.44  Score=41.83  Aligned_cols=81  Identities=17%  Similarity=0.229  Sum_probs=47.9

Q ss_pred             CCCEEEEEcC-CHHHHHHHHHHHHHCCCCeEEEEeCChhHHH-HHHH---cCCC-EEEeCCC-CcccHHHHHHHHHHHhC
Q 017868          181 PETNVLIMGA-GPIGLVTMLGAPRAFGAPRIVIVDVDDYRLS-VAKE---IGAD-NIVKVST-NLQDIAEEVEKIQKAMG  253 (365)
Q Consensus       181 ~g~~vlI~G~-g~~G~~ai~~l~~~~g~~~vi~v~~~~~~~~-~~~~---~g~~-~~~~~~~-~~~~~~~~i~~~~~~~~  253 (365)
                      ++.++||+|+ |++|..+++.+ ...|+ .|+.+++++++.+ ..++   .+.. ..+..+- +..++...+++..+. -
T Consensus         8 ~~k~ilItGasggIG~~la~~l-~~~G~-~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~Dv~~~~~i~~~~~~~~~~-~   84 (264)
T PRK07576          8 AGKNVVVVGGTSGINLGIAQAF-ARAGA-NVAVASRSQEKVDAAVAQLQQAGPEGLGVSADVRDYAAVEAAFAQIADE-F   84 (264)
T ss_pred             CCCEEEEECCCchHHHHHHHHH-HHCCC-EEEEEeCCHHHHHHHHHHHHHhCCceEEEECCCCCHHHHHHHHHHHHHH-c
Confidence            5779999987 99999999945 56698 5777777665533 2222   2322 1222222 223333444444332 2


Q ss_pred             CCceEEEeCCC
Q 017868          254 TGIDVSFDCAG  264 (365)
Q Consensus       254 ~~~d~vid~~g  264 (365)
                      +++|++|.+.|
T Consensus        85 ~~iD~vi~~ag   95 (264)
T PRK07576         85 GPIDVLVSGAA   95 (264)
T ss_pred             CCCCEEEECCC
Confidence            57999998775

>TIGR02354 thiF_fam2 thiamine biosynthesis protein ThiF, family 2

Probab=94.74  E-value=0.63  Score=39.04  Aligned_cols=35  Identities=26%  Similarity=0.454  Sum_probs=28.6

Q ss_pred             CCCEEEEEcCCHHHHHHHHHHHHHCCCCeEEEEeCC
Q 017868          181 PETNVLIMGAGPIGLVTMLGAPRAFGAPRIVIVDVD  216 (365)
Q Consensus       181 ~g~~vlI~G~g~~G~~ai~~l~~~~g~~~vi~v~~~  216 (365)
                      ...+|+|.|+|++|..+++ .+.+.|...+..+|.+
T Consensus        20 ~~~~V~IvG~GglGs~ia~-~La~~Gvg~i~lvD~D   54 (200)
T TIGR02354        20 EQATVAICGLGGLGSNVAI-NLARAGIGKLILVDFD   54 (200)
T ss_pred             hCCcEEEECcCHHHHHHHH-HHHHcCCCEEEEECCC
Confidence            3468999999999999999 4456699888888776

Members of the HesA/MoeB/ThiF family of proteins (pfam00899) include a number of members encoded in the midst of thiamine biosynthetic operons. This mix of known and putative ThiF proteins shows a deep split in phylogenetic trees, with one the E. coli ThiF and the E. coli MoeB proteins seemingly more closely related than E. coli ThiF and Campylobacter (for example) ThiF. This model represents the divergent clade of putative ThiF proteins such found in Campylobacter.

>PRK08063 enoyl-(acyl carrier protein) reductase; Provisional

Probab=94.72  E-value=0.35  Score=41.90  Aligned_cols=82  Identities=20%  Similarity=0.199  Sum_probs=46.8

Q ss_pred             CCCEEEEEcC-CHHHHHHHHHHHHHCCCCeEEEEeCChhHHH-H---HHHcCCCE-EEeCCC-CcccHHHHHHHHHHHhC
Q 017868          181 PETNVLIMGA-GPIGLVTMLGAPRAFGAPRIVIVDVDDYRLS-V---AKEIGADN-IVKVST-NLQDIAEEVEKIQKAMG  253 (365)
Q Consensus       181 ~g~~vlI~G~-g~~G~~ai~~l~~~~g~~~vi~v~~~~~~~~-~---~~~~g~~~-~~~~~~-~~~~~~~~i~~~~~~~~  253 (365)
                      ++.++||+|+ |.+|..++..++ ..|+++++...++.++.+ .   ++..+... .+..+- +..+....+++..+. .
T Consensus         3 ~~~~vlItGa~g~iG~~~a~~l~-~~g~~v~~~~~r~~~~~~~~~~~~~~~~~~~~~~~~D~~~~~~~~~~~~~~~~~-~   80 (250)
T PRK08063          3 SGKVALVTGSSRGIGKAIALRLA-EEGYDIAVNYARSRKAAEETAEEIEALGRKALAVKANVGDVEKIKEMFAQIDEE-F   80 (250)
T ss_pred             CCCEEEEeCCCchHHHHHHHHHH-HCCCEEEEEcCCCHHHHHHHHHHHHhcCCeEEEEEcCCCCHHHHHHHHHHHHHH-c
Confidence            4678999987 999999999554 569865544455554432 2   23334322 222222 222333333333332 3


Q ss_pred             CCceEEEeCCC
Q 017868          254 TGIDVSFDCAG  264 (365)
Q Consensus       254 ~~~d~vid~~g  264 (365)
                      +++|++|.+.|
T Consensus        81 ~~id~vi~~ag   91 (250)
T PRK08063         81 GRLDVFVNNAA   91 (250)
T ss_pred             CCCCEEEECCC
Confidence            47999999887

>TIGR00138 gidB 16S rRNA methyltransferase GidB

Probab=94.72  E-value=0.3  Score=40.32  Aligned_cols=94  Identities=20%  Similarity=0.283  Sum_probs=56.5

Q ss_pred             CCCEEEEEcCCHHHHHHHHHHHHHCCCCeEEEEeCChhHHHHH----HHcCCCEEEeCCCCcccHHHHHHHHHHHhCCCc
Q 017868          181 PETNVLIMGAGPIGLVTMLGAPRAFGAPRIVIVDVDDYRLSVA----KEIGADNIVKVSTNLQDIAEEVEKIQKAMGTGI  256 (365)
Q Consensus       181 ~g~~vlI~G~g~~G~~ai~~l~~~~g~~~vi~v~~~~~~~~~~----~~~g~~~~~~~~~~~~~~~~~i~~~~~~~~~~~  256 (365)
                      ++++||=.|+|. |..++. ++.......+++++.+++..+.+    ++.+...+.....+..+       +.  ....+
T Consensus        42 ~~~~vLDiGcGt-G~~s~~-la~~~~~~~V~~iD~s~~~~~~a~~~~~~~~~~~i~~i~~d~~~-------~~--~~~~f  110 (181)
T TIGR00138        42 DGKKVIDIGSGA-GFPGIP-LAIARPELKLTLLESNHKKVAFLREVKAELGLNNVEIVNGRAED-------FQ--HEEQF  110 (181)
T ss_pred             CCCeEEEecCCC-CccHHH-HHHHCCCCeEEEEeCcHHHHHHHHHHHHHhCCCCeEEEecchhh-------cc--ccCCc
Confidence            378888888753 555555 44444444799999998765443    44555432222222111       11  14689


Q ss_pred             eEEEeCC-C-CHHHHHHHHHhcccCCEEEEE
Q 017868          257 DVSFDCA-G-LNKTMSTALGATCAGGKVCLV  285 (365)
Q Consensus       257 d~vid~~-g-~~~~~~~~~~~l~~~G~~~~~  285 (365)
                      |+|+... . -+..+..+.+.|+++|.++..
T Consensus       111 D~I~s~~~~~~~~~~~~~~~~LkpgG~lvi~  141 (181)
T TIGR00138       111 DVITSRALASLNVLLELTLNLLKVGGYFLAY  141 (181)
T ss_pred             cEEEehhhhCHHHHHHHHHHhcCCCCEEEEE
Confidence            9998643 1 133555678889999999876

GidB (glucose-inhibited division protein B) appears to be present and in a single copy in nearly all complete eubacterial genomes. It is missing only from some obligate intracellular species of various lineages (Chlamydiae, Ehrlichia, Wolbachia, Anaplasma, Buchnera, etc.). GidB shows a methytransferase fold in its the crystal structure, and acts as a 7-methylguanosine (m(7)G) methyltransferase, apparently specific to 16S rRNA.

>COG2226 UbiE Methylase involved in ubiquinone/menaquinone biosynthesis [Coenzyme metabolism]

Probab=94.71  E-value=0.83  Score=39.31  Aligned_cols=106  Identities=22%  Similarity=0.373  Sum_probs=72.4

Q ss_pred             HhcCCCCCCEEEEEcCCHHHHHHHHHHHHHCCCCeEEEEeCChhHHHHHHHc----CCCEEEeC-CCCcccHHHHHHHHH
Q 017868          175 RRANIGPETNVLIMGAGPIGLVTMLGAPRAFGAPRIVIVDVDDYRLSVAKEI----GADNIVKV-STNLQDIAEEVEKIQ  249 (365)
Q Consensus       175 ~~~~~~~g~~vlI~G~g~~G~~ai~~l~~~~g~~~vi~v~~~~~~~~~~~~~----g~~~~~~~-~~~~~~~~~~i~~~~  249 (365)
                      ...++.+|++||=.++|. |-.+.. +++..|...|+++|-++.-++.+++-    +... +.+ ..+.+++.       
T Consensus        45 ~~~~~~~g~~vLDva~GT-Gd~a~~-~~k~~g~g~v~~~D~s~~ML~~a~~k~~~~~~~~-i~fv~~dAe~LP-------  114 (238)
T COG2226          45 SLLGIKPGDKVLDVACGT-GDMALL-LAKSVGTGEVVGLDISESMLEVAREKLKKKGVQN-VEFVVGDAENLP-------  114 (238)
T ss_pred             HhhCCCCCCEEEEecCCc-cHHHHH-HHHhcCCceEEEEECCHHHHHHHHHHhhccCccc-eEEEEechhhCC-------
Confidence            345566999999887653 888888 88888877899999999887766543    2221 111 12211111       


Q ss_pred             HHhCCCceEEEeCCCC------HHHHHHHHHhcccCCEEEEEccCCCC
Q 017868          250 KAMGTGIDVSFDCAGL------NKTMSTALGATCAGGKVCLVGMGHHE  291 (365)
Q Consensus       250 ~~~~~~~d~vid~~g~------~~~~~~~~~~l~~~G~~~~~g~~~~~  291 (365)
                       .....+|.|.-+.|-      +..+..+.++|+|+|+++.+..+...
T Consensus       115 -f~D~sFD~vt~~fglrnv~d~~~aL~E~~RVlKpgG~~~vle~~~p~  161 (238)
T COG2226         115 -FPDNSFDAVTISFGLRNVTDIDKALKEMYRVLKPGGRLLVLEFSKPD  161 (238)
T ss_pred             -CCCCccCEEEeeehhhcCCCHHHHHHHHHHhhcCCeEEEEEEcCCCC
Confidence             125679999876663      35777899999999999998765443

>KOG1252 consensus Cystathionine beta-synthase and related enzymes [Amino acid transport and metabolism]

Probab=94.71  E-value=1.2  Score=39.91  Aligned_cols=57  Identities=19%  Similarity=0.299  Sum_probs=44.0

Q ss_pred             HhcCCCCCCEEEEEcC-CHHHHHHHHHHHHHCCCCeEEEEe--CChhHHHHHHHcCCCEEE
Q 017868          175 RRANIGPETNVLIMGA-GPIGLVTMLGAPRAFGAPRIVIVD--VDDYRLSVAKEIGADNIV  232 (365)
Q Consensus       175 ~~~~~~~g~~vlI~G~-g~~G~~ai~~l~~~~g~~~vi~v~--~~~~~~~~~~~~g~~~~~  232 (365)
                      ..+.+.||.++||-.. |..|...+. ++...|++.++++.  .+.+|+..+++||+.-+.
T Consensus        96 ~~G~i~pg~stliEpTSGNtGigLA~-~~a~~Gyk~i~tmP~~ms~Ek~~~l~a~Gaeii~  155 (362)
T KOG1252|consen   96 KKGLITPGKSTLIEPTSGNTGIGLAY-MAALRGYKCIITMPEKMSKEKRILLRALGAEIIL  155 (362)
T ss_pred             HcCCccCCceEEEecCCCchHHHHHH-HHHHcCceEEEEechhhhHHHHHHHHHcCCEEEe
Confidence            4578999999999875 778887777 88899996555552  335788899999987554

>PRK15116 sulfur acceptor protein CsdL; Provisional

Probab=94.70  E-value=0.7  Score=40.59  Aligned_cols=35  Identities=23%  Similarity=0.432  Sum_probs=28.7

Q ss_pred             CCCEEEEEcCCHHHHHHHHHHHHHCCCCeEEEEeCC
Q 017868          181 PETNVLIMGAGPIGLVTMLGAPRAFGAPRIVIVDVD  216 (365)
Q Consensus       181 ~g~~vlI~G~g~~G~~ai~~l~~~~g~~~vi~v~~~  216 (365)
                      .+.+|+|.|+|++|..++. .+-+.|...+..+|.+
T Consensus        29 ~~s~VlVvG~GGVGs~vae-~Lar~GVg~itLiD~D   63 (268)
T PRK15116         29 ADAHICVVGIGGVGSWAAE-ALARTGIGAITLIDMD   63 (268)
T ss_pred             cCCCEEEECcCHHHHHHHH-HHHHcCCCEEEEEeCC
Confidence            4568999999999999999 5556698888888755

>PRK04457 spermidine synthase; Provisional

Probab=94.70  E-value=0.92  Score=39.88  Aligned_cols=97  Identities=15%  Similarity=0.150  Sum_probs=63.3

Q ss_pred             CCCCEEEEEcCCHHHHHHHHHHHHHCCCCeEEEEeCChhHHHHHHHc-CCC----EEEeCCCCcccHHHHHHHHHHHhCC
Q 017868          180 GPETNVLIMGAGPIGLVTMLGAPRAFGAPRIVIVDVDDYRLSVAKEI-GAD----NIVKVSTNLQDIAEEVEKIQKAMGT  254 (365)
Q Consensus       180 ~~g~~vlI~G~g~~G~~ai~~l~~~~g~~~vi~v~~~~~~~~~~~~~-g~~----~~~~~~~~~~~~~~~i~~~~~~~~~  254 (365)
                      .+..+||+.|+|+ |..+.. +++......+++++.+++-.+.+++. +..    .+....   .|..+.++.    ...
T Consensus        65 ~~~~~vL~IG~G~-G~l~~~-l~~~~p~~~v~~VEidp~vi~~A~~~f~~~~~~~rv~v~~---~Da~~~l~~----~~~  135 (262)
T PRK04457         65 PRPQHILQIGLGG-GSLAKF-IYTYLPDTRQTAVEINPQVIAVARNHFELPENGERFEVIE---ADGAEYIAV----HRH  135 (262)
T ss_pred             CCCCEEEEECCCH-hHHHHH-HHHhCCCCeEEEEECCHHHHHHHHHHcCCCCCCCceEEEE---CCHHHHHHh----CCC
Confidence            4567899998865 666666 65565555799999999999888764 321    121111   233333432    246


Q ss_pred             CceEEEe-CCC---------CHHHHHHHHHhcccCCEEEEE
Q 017868          255 GIDVSFD-CAG---------LNKTMSTALGATCAGGKVCLV  285 (365)
Q Consensus       255 ~~d~vid-~~g---------~~~~~~~~~~~l~~~G~~~~~  285 (365)
                      .+|+|+- +..         ....+..+.++|+++|.++..
T Consensus       136 ~yD~I~~D~~~~~~~~~~l~t~efl~~~~~~L~pgGvlvin  176 (262)
T PRK04457        136 STDVILVDGFDGEGIIDALCTQPFFDDCRNALSSDGIFVVN  176 (262)
T ss_pred             CCCEEEEeCCCCCCCccccCcHHHHHHHHHhcCCCcEEEEE
Confidence            7999973 221         135677889999999999874

>PRK12743 oxidoreductase; Provisional

Probab=94.68  E-value=0.41  Score=41.75  Aligned_cols=81  Identities=19%  Similarity=0.190  Sum_probs=45.7

Q ss_pred             CCEEEEEcC-CHHHHHHHHHHHHHCCCCeEEEEeCChhHHH----HHHHcCCCE-EEeCCC-CcccHHHHHHHHHHHhCC
Q 017868          182 ETNVLIMGA-GPIGLVTMLGAPRAFGAPRIVIVDVDDYRLS----VAKEIGADN-IVKVST-NLQDIAEEVEKIQKAMGT  254 (365)
Q Consensus       182 g~~vlI~G~-g~~G~~ai~~l~~~~g~~~vi~v~~~~~~~~----~~~~~g~~~-~~~~~~-~~~~~~~~i~~~~~~~~~  254 (365)
                      +.++||+|+ +++|..+++.++ ..|+++++...++.++.+    .++..+... .+..+- +..+....+.++.+. -+
T Consensus         2 ~k~vlItGas~giG~~~a~~l~-~~G~~V~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~Dl~~~~~~~~~~~~~~~~-~~   79 (256)
T PRK12743          2 AQVAIVTASDSGIGKACALLLA-QQGFDIGITWHSDEEGAKETAEEVRSHGVRAEIRQLDLSDLPEGAQALDKLIQR-LG   79 (256)
T ss_pred             CCEEEEECCCchHHHHHHHHHH-HCCCEEEEEeCCChHHHHHHHHHHHhcCCceEEEEccCCCHHHHHHHHHHHHHH-cC
Confidence            468999987 999999999555 569965444444444332    223345322 222222 222333333333332 35


Q ss_pred             CceEEEeCCC
Q 017868          255 GIDVSFDCAG  264 (365)
Q Consensus       255 ~~d~vid~~g  264 (365)
                      ++|++|.+.|
T Consensus        80 ~id~li~~ag   89 (256)
T PRK12743         80 RIDVLVNNAG   89 (256)
T ss_pred             CCCEEEECCC
Confidence            7999999887

>PRK08213 gluconate 5-dehydrogenase; Provisional

Probab=94.66  E-value=0.46  Score=41.47  Aligned_cols=82  Identities=22%  Similarity=0.283  Sum_probs=48.4

Q ss_pred             CCCEEEEEcC-CHHHHHHHHHHHHHCCCCeEEEEeCChhHHHHHH----HcCCCE-EEeCCC-CcccHHHHHHHHHHHhC
Q 017868          181 PETNVLIMGA-GPIGLVTMLGAPRAFGAPRIVIVDVDDYRLSVAK----EIGADN-IVKVST-NLQDIAEEVEKIQKAMG  253 (365)
Q Consensus       181 ~g~~vlI~G~-g~~G~~ai~~l~~~~g~~~vi~v~~~~~~~~~~~----~~g~~~-~~~~~~-~~~~~~~~i~~~~~~~~  253 (365)
                      ++.++||+|+ |.+|..+++.++ ..|+ .|+.++++.++.+...    ..+... .+..+- +.+++.+.+.++.+. .
T Consensus        11 ~~k~ilItGa~g~IG~~la~~l~-~~G~-~V~~~~r~~~~~~~~~~~i~~~~~~~~~~~~Dl~d~~~i~~~~~~~~~~-~   87 (259)
T PRK08213         11 SGKTALVTGGSRGLGLQIAEALG-EAGA-RVVLSARKAEELEEAAAHLEALGIDALWIAADVADEADIERLAEETLER-F   87 (259)
T ss_pred             CCCEEEEECCCchHHHHHHHHHH-HcCC-EEEEEeCCHHHHHHHHHHHHhcCCeEEEEEccCCCHHHHHHHHHHHHHH-h
Confidence            4679999987 999999999555 5698 5777777766554332    223221 222222 122333333333322 2


Q ss_pred             CCceEEEeCCCC
Q 017868          254 TGIDVSFDCAGL  265 (365)
Q Consensus       254 ~~~d~vid~~g~  265 (365)
                      .++|.+|.++|.
T Consensus        88 ~~id~vi~~ag~   99 (259)
T PRK08213         88 GHVDILVNNAGA   99 (259)
T ss_pred             CCCCEEEECCCC
Confidence            579999998873

>PRK07890 short chain dehydrogenase; Provisional

Probab=94.65  E-value=0.45  Score=41.42  Aligned_cols=82  Identities=21%  Similarity=0.160  Sum_probs=48.7

Q ss_pred             CCCEEEEEcC-CHHHHHHHHHHHHHCCCCeEEEEeCChhHHHHH-HHc---CCC-EEEeCCC-CcccHHHHHHHHHHHhC
Q 017868          181 PETNVLIMGA-GPIGLVTMLGAPRAFGAPRIVIVDVDDYRLSVA-KEI---GAD-NIVKVST-NLQDIAEEVEKIQKAMG  253 (365)
Q Consensus       181 ~g~~vlI~G~-g~~G~~ai~~l~~~~g~~~vi~v~~~~~~~~~~-~~~---g~~-~~~~~~~-~~~~~~~~i~~~~~~~~  253 (365)
                      ++.++||+|+ +++|..++..++ ..|+ +|+.+++++++.+.+ +++   +.. ..+..+- +.+++...+....+. -
T Consensus         4 ~~k~vlItGa~~~IG~~la~~l~-~~G~-~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~D~~~~~~~~~~~~~~~~~-~   80 (258)
T PRK07890          4 KGKVVVVSGVGPGLGRTLAVRAA-RAGA-DVVLAARTAERLDEVAAEIDDLGRRALAVPTDITDEDQCANLVALALER-F   80 (258)
T ss_pred             CCCEEEEECCCCcHHHHHHHHHH-HcCC-EEEEEeCCHHHHHHHHHHHHHhCCceEEEecCCCCHHHHHHHHHHHHHH-c
Confidence            5678999987 999999999554 6698 577777776654332 222   321 1222222 223333333333332 2


Q ss_pred             CCceEEEeCCCC
Q 017868          254 TGIDVSFDCAGL  265 (365)
Q Consensus       254 ~~~d~vid~~g~  265 (365)
                      +.+|++|.+.|.
T Consensus        81 g~~d~vi~~ag~   92 (258)
T PRK07890         81 GRVDALVNNAFR   92 (258)
T ss_pred             CCccEEEECCcc
Confidence            478999998863

>PRK06482 short chain dehydrogenase; Provisional

Probab=94.63  E-value=0.38  Score=42.51  Aligned_cols=80  Identities=21%  Similarity=0.180  Sum_probs=47.6

Q ss_pred             CEEEEEcC-CHHHHHHHHHHHHHCCCCeEEEEeCChhHHHHHHH-cCCCE-EEeCCC-CcccHHHHHHHHHHHhCCCceE
Q 017868          183 TNVLIMGA-GPIGLVTMLGAPRAFGAPRIVIVDVDDYRLSVAKE-IGADN-IVKVST-NLQDIAEEVEKIQKAMGTGIDV  258 (365)
Q Consensus       183 ~~vlI~G~-g~~G~~ai~~l~~~~g~~~vi~v~~~~~~~~~~~~-~g~~~-~~~~~~-~~~~~~~~i~~~~~~~~~~~d~  258 (365)
                      .++||+|+ |.+|..+++.++ ..|. .|+++.+++++.+.+++ ++... .+..+- +..++.+.+.++.+. ..++|+
T Consensus         3 k~vlVtGasg~IG~~la~~L~-~~g~-~v~~~~r~~~~~~~~~~~~~~~~~~~~~D~~~~~~~~~~~~~~~~~-~~~id~   79 (276)
T PRK06482          3 KTWFITGASSGFGRGMTERLL-ARGD-RVAATVRRPDALDDLKARYGDRLWVLQLDVTDSAAVRAVVDRAFAA-LGRIDV   79 (276)
T ss_pred             CEEEEecCCCHHHHHHHHHHH-HCCC-EEEEEeCCHHHHHHHHHhccCceEEEEccCCCHHHHHHHHHHHHHH-cCCCCE
Confidence            57999987 999999998554 5588 57777777776654433 33211 111111 222333334433322 357899


Q ss_pred             EEeCCCC
Q 017868          259 SFDCAGL  265 (365)
Q Consensus       259 vid~~g~  265 (365)
                      +|.++|.
T Consensus        80 vi~~ag~   86 (276)
T PRK06482         80 VVSNAGY   86 (276)
T ss_pred             EEECCCC
Confidence            9998873

>PRK05562 precorrin-2 dehydrogenase; Provisional

Probab=94.60  E-value=1.5  Score=37.32  Aligned_cols=92  Identities=13%  Similarity=0.050  Sum_probs=50.7

Q ss_pred             CCCEEEEEcCCHHHHHHHHHHHHHCCCCeEEEEeCC-hhHHHHHHHcCCCEEEeCCCCcccHHHHHHHHHHHhCCCceEE
Q 017868          181 PETNVLIMGAGPIGLVTMLGAPRAFGAPRIVIVDVD-DYRLSVAKEIGADNIVKVSTNLQDIAEEVEKIQKAMGTGIDVS  259 (365)
Q Consensus       181 ~g~~vlI~G~g~~G~~ai~~l~~~~g~~~vi~v~~~-~~~~~~~~~~g~~~~~~~~~~~~~~~~~i~~~~~~~~~~~d~v  259 (365)
                      ++.+|||.|+|.++.-=+. .+...|++ |.++... .+....+.+.+-...+   ..  ++...  +     -.++++|
T Consensus        24 ~~~~VLVVGGG~VA~RK~~-~Ll~~gA~-VtVVap~i~~el~~l~~~~~i~~~---~r--~~~~~--d-----l~g~~LV   89 (223)
T PRK05562         24 NKIKVLIIGGGKAAFIKGK-TFLKKGCY-VYILSKKFSKEFLDLKKYGNLKLI---KG--NYDKE--F-----IKDKHLI   89 (223)
T ss_pred             CCCEEEEECCCHHHHHHHH-HHHhCCCE-EEEEcCCCCHHHHHHHhCCCEEEE---eC--CCChH--H-----hCCCcEE
Confidence            5679999999999988777 44457985 4444322 1222222222322222   11  22111  1     1579999


Q ss_pred             EeCCCCHHHHHHHHHhcccCCEEEEEc
Q 017868          260 FDCAGLNKTMSTALGATCAGGKVCLVG  286 (365)
Q Consensus       260 id~~g~~~~~~~~~~~l~~~G~~~~~g  286 (365)
                      |-|++.+..-..........+.++...
T Consensus        90 iaATdD~~vN~~I~~~a~~~~~lvn~v  116 (223)
T PRK05562         90 VIATDDEKLNNKIRKHCDRLYKLYIDC  116 (223)
T ss_pred             EECCCCHHHHHHHHHHHHHcCCeEEEc
Confidence            999998744334444444446555543

>PRK05597 molybdopterin biosynthesis protein MoeB; Validated

Probab=94.59  E-value=0.44  Score=43.93  Aligned_cols=35  Identities=31%  Similarity=0.490  Sum_probs=29.3

Q ss_pred             CCCEEEEEcCCHHHHHHHHHHHHHCCCCeEEEEeCC
Q 017868          181 PETNVLIMGAGPIGLVTMLGAPRAFGAPRIVIVDVD  216 (365)
Q Consensus       181 ~g~~vlI~G~g~~G~~ai~~l~~~~g~~~vi~v~~~  216 (365)
                      ...+|||.|+|++|..++. .+...|..++..+|.+
T Consensus        27 ~~~~VlivG~GGlGs~~a~-~La~~Gvg~i~lvD~D   61 (355)
T PRK05597         27 FDAKVAVIGAGGLGSPALL-YLAGAGVGHITIIDDD   61 (355)
T ss_pred             hCCeEEEECCCHHHHHHHH-HHHHcCCCeEEEEeCC
Confidence            3468999999999999999 5557799999888765

>PRK06141 ornithine cyclodeaminase; Validated

Probab=94.58  E-value=1.1  Score=40.51  Aligned_cols=100  Identities=17%  Similarity=0.153  Sum_probs=62.4

Q ss_pred             HhcCCCCCCEEEEEcCCHHHHHHHHHHHHHCCCCeEEEEeCChhHHH-HHHHc---CCCEEEeCCCCcccHHHHHHHHHH
Q 017868          175 RRANIGPETNVLIMGAGPIGLVTMLGAPRAFGAPRIVIVDVDDYRLS-VAKEI---GADNIVKVSTNLQDIAEEVEKIQK  250 (365)
Q Consensus       175 ~~~~~~~g~~vlI~G~g~~G~~ai~~l~~~~g~~~vi~v~~~~~~~~-~~~~~---g~~~~~~~~~~~~~~~~~i~~~~~  250 (365)
                      +...-....+++|.|+|..|.+.+..++...+.+.+.+.++++++.+ +++++   +.. +...    .+..+.+     
T Consensus       118 ~~La~~~~~~v~iiG~G~~a~~~~~al~~~~~~~~V~V~~Rs~~~a~~~a~~~~~~g~~-~~~~----~~~~~av-----  187 (314)
T PRK06141        118 SYLARKDASRLLVVGTGRLASLLALAHASVRPIKQVRVWGRDPAKAEALAAELRAQGFD-AEVV----TDLEAAV-----  187 (314)
T ss_pred             HHhCCCCCceEEEECCcHHHHHHHHHHHhcCCCCEEEEEcCCHHHHHHHHHHHHhcCCc-eEEe----CCHHHHH-----
Confidence            43333556789999999999988874555567778888888887755 44554   322 2211    1222211     


Q ss_pred             HhCCCceEEEeCCCCHHHHHHHHHhcccCCEEEEEccC
Q 017868          251 AMGTGIDVSFDCAGLNKTMSTALGATCAGGKVCLVGMG  288 (365)
Q Consensus       251 ~~~~~~d~vid~~g~~~~~~~~~~~l~~~G~~~~~g~~  288 (365)
                         ...|+|+.++.+...+ ..-..++++-++..+|..
T Consensus       188 ---~~aDIVi~aT~s~~pv-l~~~~l~~g~~i~~ig~~  221 (314)
T PRK06141        188 ---RQADIISCATLSTEPL-VRGEWLKPGTHLDLVGNF  221 (314)
T ss_pred             ---hcCCEEEEeeCCCCCE-ecHHHcCCCCEEEeeCCC
Confidence               4789999988764211 112567887776666643

>TIGR02992 ectoine_eutC ectoine utilization protein EutC

Probab=94.55  E-value=0.79  Score=41.75  Aligned_cols=95  Identities=17%  Similarity=0.177  Sum_probs=61.7

Q ss_pred             CCCCEEEEEcCCHHHHHHHHHHHHHCCCCeEEEEeCChhHHH-HHHHc----CCCEEEeCCCCcccHHHHHHHHHHHhCC
Q 017868          180 GPETNVLIMGAGPIGLVTMLGAPRAFGAPRIVIVDVDDYRLS-VAKEI----GADNIVKVSTNLQDIAEEVEKIQKAMGT  254 (365)
Q Consensus       180 ~~g~~vlI~G~g~~G~~ai~~l~~~~g~~~vi~v~~~~~~~~-~~~~~----g~~~~~~~~~~~~~~~~~i~~~~~~~~~  254 (365)
                      +...+++|.|+|..+.+.+..++...+++.+.+..++.+|.+ +++++    +.. +..+    .+..+.+        .
T Consensus       127 ~~~~~v~iiGaG~qA~~~~~al~~~~~i~~v~V~~R~~~~a~~~a~~~~~~~g~~-v~~~----~~~~~av--------~  193 (326)
T TIGR02992       127 EDSSVVAIFGAGMQARLQLEALTLVRDIRSARIWARDSAKAEALALQLSSLLGID-VTAA----TDPRAAM--------S  193 (326)
T ss_pred             CCCcEEEEECCCHHHHHHHHHHHHhCCccEEEEECCCHHHHHHHHHHHHhhcCce-EEEe----CCHHHHh--------c
Confidence            455689999999999988885555678888888888887765 44444    432 2211    1222222        4


Q ss_pred             CceEEEeCCCCHHHHHHHHHhcccCCEEEEEccC
Q 017868          255 GIDVSFDCAGLNKTMSTALGATCAGGKVCLVGMG  288 (365)
Q Consensus       255 ~~d~vid~~g~~~~~~~~~~~l~~~G~~~~~g~~  288 (365)
                      ..|+|+.|+.....+ .....++++-++..+|..
T Consensus       194 ~aDiVvtaT~s~~p~-i~~~~l~~g~~i~~vg~~  226 (326)
T TIGR02992       194 GADIIVTTTPSETPI-LHAEWLEPGQHVTAMGSD  226 (326)
T ss_pred             cCCEEEEecCCCCcE-ecHHHcCCCcEEEeeCCC
Confidence            799999998764211 123467887777777643

Members of this protein family are EutA, a predicted arylmalonate decarboxylase found in a conserved ectoine utilization operon of species that include Sinorhizobium meliloti 1021 (where it is known to be induced by ectoine), Mesorhizobium loti, Silicibacter pomeroyi, Agrobacterium tumefaciens, and Pseudomonas putida. This family belongs to the ornithine cyclodeaminase/mu-crystallin family (pfam02423).

>cd00757 ThiF_MoeB_HesA_family ThiF_MoeB_HesA

Probab=94.55  E-value=0.7  Score=39.69  Aligned_cols=34  Identities=32%  Similarity=0.447  Sum_probs=28.0

Q ss_pred             CCEEEEEcCCHHHHHHHHHHHHHCCCCeEEEEeCC
Q 017868          182 ETNVLIMGAGPIGLVTMLGAPRAFGAPRIVIVDVD  216 (365)
Q Consensus       182 g~~vlI~G~g~~G~~ai~~l~~~~g~~~vi~v~~~  216 (365)
                      ..+|+|.|+|++|..++. .+...|..++..+|.+
T Consensus        21 ~~~VlivG~GglGs~va~-~La~~Gvg~i~lvD~D   54 (228)
T cd00757          21 NARVLVVGAGGLGSPAAE-YLAAAGVGKLGLVDDD   54 (228)
T ss_pred             CCcEEEECCCHHHHHHHH-HHHHcCCCEEEEEcCC
Confidence            468999999999999999 5556799888888543

Family of E1-like enzymes involved in molybdopterin and thiamine biosynthesis family. The common reaction mechanism catalyzed by MoeB and ThiF, like other E1 enzymes, begins with a nucleophilic attack of the C-terminal carboxylate of MoaD and ThiS, respectively, on the alpha-phosphate of an ATP molecule bound at the active site of the activating enzymes, leading to the formation of a high-energy acyladenylate intermediate and subsequently to the formation of a thiocarboxylate at the C termini of MoaD and ThiS. MoeB, as the MPT synthase (MoaE/MoaD complex) sulfurase, is involved in the biosynthesis of the molybdenum cofactor, a derivative of the tricyclic pterin, molybdopterin (MPT). ThiF catalyzes the adenylation of ThiS, as part of the biosynthesis pathway of thiamin pyrophosphate (vitamin B1).

>PRK06125 short chain dehydrogenase; Provisional

Probab=94.54  E-value=0.44  Score=41.61  Aligned_cols=79  Identities=25%  Similarity=0.337  Sum_probs=47.4

Q ss_pred             CCCEEEEEcC-CHHHHHHHHHHHHHCCCCeEEEEeCChhHHHHH-HHc----CCC-EEEeCCCCcccHHHHHHHHHHHhC
Q 017868          181 PETNVLIMGA-GPIGLVTMLGAPRAFGAPRIVIVDVDDYRLSVA-KEI----GAD-NIVKVSTNLQDIAEEVEKIQKAMG  253 (365)
Q Consensus       181 ~g~~vlI~G~-g~~G~~ai~~l~~~~g~~~vi~v~~~~~~~~~~-~~~----g~~-~~~~~~~~~~~~~~~i~~~~~~~~  253 (365)
                      .+.++||.|+ +++|..+++.++ ..|+ .|+.+++++++.+.+ +++    +.. ..+..+-  .+. +.++++.+. -
T Consensus         6 ~~k~vlItG~~~giG~~ia~~l~-~~G~-~V~~~~r~~~~~~~~~~~l~~~~~~~~~~~~~D~--~~~-~~~~~~~~~-~   79 (259)
T PRK06125          6 AGKRVLITGASKGIGAAAAEAFA-AEGC-HLHLVARDADALEALAADLRAAHGVDVAVHALDL--SSP-EAREQLAAE-A   79 (259)
T ss_pred             CCCEEEEeCCCchHHHHHHHHHH-HcCC-EEEEEeCCHHHHHHHHHHHHhhcCCceEEEEecC--CCH-HHHHHHHHH-h
Confidence            4689999987 899999999554 5699 677777776654432 222    321 1222222  122 223333332 2


Q ss_pred             CCceEEEeCCCC
Q 017868          254 TGIDVSFDCAGL  265 (365)
Q Consensus       254 ~~~d~vid~~g~  265 (365)
                      +++|++|.+.|.
T Consensus        80 g~id~lv~~ag~   91 (259)
T PRK06125         80 GDIDILVNNAGA   91 (259)
T ss_pred             CCCCEEEECCCC
Confidence            579999998873

>TIGR03206 benzo_BadH 2-hydroxycyclohexanecarboxyl-CoA dehydrogenase

Probab=94.53  E-value=0.52  Score=40.78  Aligned_cols=81  Identities=19%  Similarity=0.296  Sum_probs=47.0

Q ss_pred             CCCEEEEEcC-CHHHHHHHHHHHHHCCCCeEEEEeCChhHHHHH----HHcCCC-EEEeCCC-CcccHHHHHHHHHHHhC
Q 017868          181 PETNVLIMGA-GPIGLVTMLGAPRAFGAPRIVIVDVDDYRLSVA----KEIGAD-NIVKVST-NLQDIAEEVEKIQKAMG  253 (365)
Q Consensus       181 ~g~~vlI~G~-g~~G~~ai~~l~~~~g~~~vi~v~~~~~~~~~~----~~~g~~-~~~~~~~-~~~~~~~~i~~~~~~~~  253 (365)
                      ++.++||+|+ |.+|..++..+ ...|+ .|+.++++.++.+.+    ++.+.. ..+..+- +.+++.+.++.+.+. -
T Consensus         2 ~~~~ilItGas~~iG~~la~~l-~~~g~-~v~~~~r~~~~~~~~~~~~~~~~~~~~~~~~d~~~~~~~~~~~~~~~~~-~   78 (250)
T TIGR03206         2 KDKTAIVTGGGGGIGGATCRRF-AEEGA-KVAVFDLNREAAEKVAADIRAKGGNAQAFACDITDRDSVDTAVAAAEQA-L   78 (250)
T ss_pred             CCCEEEEeCCCChHHHHHHHHH-HHCCC-EEEEecCCHHHHHHHHHHHHhcCCcEEEEEcCCCCHHHHHHHHHHHHHH-c
Confidence            4678999987 99999999945 45688 566676666554322    222321 1222222 122333333333322 3


Q ss_pred             CCceEEEeCCC
Q 017868          254 TGIDVSFDCAG  264 (365)
Q Consensus       254 ~~~d~vid~~g  264 (365)
                      .++|++|.+.|
T Consensus        79 ~~~d~vi~~ag   89 (250)
T TIGR03206        79 GPVDVLVNNAG   89 (250)
T ss_pred             CCCCEEEECCC
Confidence            57899999887

Members of this protein family are the enzyme 2-hydroxycyclohexanecarboxyl-CoA dehydrogenase. The enzymatic properties were confirmed experimentally in Rhodopseudomonas palustris; the enzyme is homotetrameric, and not sensitive to oxygen. This enzyme is part of proposed pathway for degradation of benzoyl-CoA to 3-hydroxypimeloyl-CoA that differs from the analogous in Thauera aromatica. It also may occur in degradation of the non-aromatic compound cyclohexane-1-carboxylate.

>PRK08328 hypothetical protein; Provisional

Probab=94.52  E-value=0.46  Score=40.87  Aligned_cols=35  Identities=26%  Similarity=0.435  Sum_probs=28.7

Q ss_pred             CCCEEEEEcCCHHHHHHHHHHHHHCCCCeEEEEeCC
Q 017868          181 PETNVLIMGAGPIGLVTMLGAPRAFGAPRIVIVDVD  216 (365)
Q Consensus       181 ~g~~vlI~G~g~~G~~ai~~l~~~~g~~~vi~v~~~  216 (365)
                      .+.+|+|.|+|++|..+++ .+...|..++..+|.+
T Consensus        26 ~~~~VlIiG~GGlGs~ia~-~La~~Gvg~i~lvD~D   60 (231)
T PRK08328         26 KKAKVAVVGVGGLGSPVAY-YLAAAGVGRILLIDEQ   60 (231)
T ss_pred             hCCcEEEECCCHHHHHHHH-HHHHcCCCEEEEEcCC
Confidence            3468999999999999999 5556799988888644

>PRK12429 3-hydroxybutyrate dehydrogenase; Provisional

Probab=94.52  E-value=0.42  Score=41.55  Aligned_cols=81  Identities=26%  Similarity=0.373  Sum_probs=47.3

Q ss_pred             CCCEEEEEcC-CHHHHHHHHHHHHHCCCCeEEEEeCChhHHHH-HHH---cCCCE-EEeCCC-CcccHHHHHHHHHHHhC
Q 017868          181 PETNVLIMGA-GPIGLVTMLGAPRAFGAPRIVIVDVDDYRLSV-AKE---IGADN-IVKVST-NLQDIAEEVEKIQKAMG  253 (365)
Q Consensus       181 ~g~~vlI~G~-g~~G~~ai~~l~~~~g~~~vi~v~~~~~~~~~-~~~---~g~~~-~~~~~~-~~~~~~~~i~~~~~~~~  253 (365)
                      .+.++||+|+ |.+|...++.++ ..|+ .++.+++++++.+. ..+   .+... .+..+- +..++.+.+..+.+. .
T Consensus         3 ~~~~vlItG~sg~iG~~la~~l~-~~g~-~v~~~~r~~~~~~~~~~~~~~~~~~~~~~~~Dl~~~~~~~~~~~~~~~~-~   79 (258)
T PRK12429          3 KGKVALVTGAASGIGLEIALALA-KEGA-KVVIADLNDEAAAAAAEALQKAGGKAIGVAMDVTDEEAINAGIDYAVET-F   79 (258)
T ss_pred             CCCEEEEECCCchHHHHHHHHHH-HCCC-eEEEEeCCHHHHHHHHHHHHhcCCcEEEEEcCCCCHHHHHHHHHHHHHH-c
Confidence            3578999987 999999999554 5598 56777777665432 222   23221 222222 222333333333222 3


Q ss_pred             CCceEEEeCCC
Q 017868          254 TGIDVSFDCAG  264 (365)
Q Consensus       254 ~~~d~vid~~g  264 (365)
                      .++|++|.++|
T Consensus        80 ~~~d~vi~~a~   90 (258)
T PRK12429         80 GGVDILVNNAG   90 (258)
T ss_pred             CCCCEEEECCC
Confidence            57999999886

>PRK07856 short chain dehydrogenase; Provisional

Probab=94.52  E-value=0.4  Score=41.71  Aligned_cols=77  Identities=22%  Similarity=0.222  Sum_probs=45.7

Q ss_pred             CCCEEEEEcC-CHHHHHHHHHHHHHCCCCeEEEEeCChhHHHHHHHcCCC-EEEeCCC-CcccHHHHHHHHHHHhCCCce
Q 017868          181 PETNVLIMGA-GPIGLVTMLGAPRAFGAPRIVIVDVDDYRLSVAKEIGAD-NIVKVST-NLQDIAEEVEKIQKAMGTGID  257 (365)
Q Consensus       181 ~g~~vlI~G~-g~~G~~ai~~l~~~~g~~~vi~v~~~~~~~~~~~~~g~~-~~~~~~~-~~~~~~~~i~~~~~~~~~~~d  257 (365)
                      .+.++||+|+ |++|.++++.++ ..|+ .|+.+++++++    +..+.. ..+..+- +.+++.+.+..+.+. .+.+|
T Consensus         5 ~~k~~lItGas~gIG~~la~~l~-~~g~-~v~~~~r~~~~----~~~~~~~~~~~~D~~~~~~~~~~~~~~~~~-~~~id   77 (252)
T PRK07856          5 TGRVVLVTGGTRGIGAGIARAFL-AAGA-TVVVCGRRAPE----TVDGRPAEFHAADVRDPDQVAALVDAIVER-HGRLD   77 (252)
T ss_pred             CCCEEEEeCCCchHHHHHHHHHH-HCCC-EEEEEeCChhh----hhcCCceEEEEccCCCHHHHHHHHHHHHHH-cCCCC
Confidence            4688999987 999999999554 5698 56677666554    112221 1222221 222333333333332 35789


Q ss_pred             EEEeCCC
Q 017868          258 VSFDCAG  264 (365)
Q Consensus       258 ~vid~~g  264 (365)
                      ++|.+.|
T Consensus        78 ~vi~~ag   84 (252)
T PRK07856         78 VLVNNAG   84 (252)
T ss_pred             EEEECCC
Confidence            9999887

>PRK05876 short chain dehydrogenase; Provisional

Probab=94.51  E-value=0.34  Score=42.94  Aligned_cols=81  Identities=27%  Similarity=0.325  Sum_probs=47.6

Q ss_pred             CCCEEEEEcC-CHHHHHHHHHHHHHCCCCeEEEEeCChhHHH-HHHH---cCCCE-EEeCCC-CcccHHHHHHHHHHHhC
Q 017868          181 PETNVLIMGA-GPIGLVTMLGAPRAFGAPRIVIVDVDDYRLS-VAKE---IGADN-IVKVST-NLQDIAEEVEKIQKAMG  253 (365)
Q Consensus       181 ~g~~vlI~G~-g~~G~~ai~~l~~~~g~~~vi~v~~~~~~~~-~~~~---~g~~~-~~~~~~-~~~~~~~~i~~~~~~~~  253 (365)
                      .+.++||+|+ +++|.+++..+ ...|++ |+.+++++++.+ ..++   .+... .+..+- +..++.+.+.+..+. -
T Consensus         5 ~~k~vlVTGas~gIG~ala~~L-a~~G~~-Vv~~~r~~~~l~~~~~~l~~~~~~~~~~~~Dv~d~~~v~~~~~~~~~~-~   81 (275)
T PRK05876          5 PGRGAVITGGASGIGLATGTEF-ARRGAR-VVLGDVDKPGLRQAVNHLRAEGFDVHGVMCDVRHREEVTHLADEAFRL-L   81 (275)
T ss_pred             CCCEEEEeCCCchHHHHHHHHH-HHCCCE-EEEEeCCHHHHHHHHHHHHhcCCeEEEEeCCCCCHHHHHHHHHHHHHH-c
Confidence            4678999987 99999999945 456994 666767665543 2222   23321 122221 222333333333322 3


Q ss_pred             CCceEEEeCCC
Q 017868          254 TGIDVSFDCAG  264 (365)
Q Consensus       254 ~~~d~vid~~g  264 (365)
                      +++|++|.+.|
T Consensus        82 g~id~li~nAg   92 (275)
T PRK05876         82 GHVDVVFSNAG   92 (275)
T ss_pred             CCCCEEEECCC
Confidence            57999999887

>PLN02233 ubiquinone biosynthesis methyltransferase

Probab=94.51  E-value=0.53  Score=41.37  Aligned_cols=104  Identities=18%  Similarity=0.192  Sum_probs=64.2

Q ss_pred             HhcCCCCCCEEEEEcCCHHHHHHHHHHHHHCCC-CeEEEEeCChhHHHHHHHc-C------CCEEEeCCCCcccHHHHHH
Q 017868          175 RRANIGPETNVLIMGAGPIGLVTMLGAPRAFGA-PRIVIVDVDDYRLSVAKEI-G------ADNIVKVSTNLQDIAEEVE  246 (365)
Q Consensus       175 ~~~~~~~g~~vlI~G~g~~G~~ai~~l~~~~g~-~~vi~v~~~~~~~~~~~~~-g------~~~~~~~~~~~~~~~~~i~  246 (365)
                      +...++++++||-.|+|. |..+.. +++..+. ..|+++|.+++-.+.+++. .      ...+.....+..++     
T Consensus        67 ~~~~~~~~~~VLDlGcGt-G~~~~~-la~~~~~~~~V~gvD~S~~ml~~A~~r~~~~~~~~~~~i~~~~~d~~~l-----  139 (261)
T PLN02233         67 SWSGAKMGDRVLDLCCGS-GDLAFL-LSEKVGSDGKVMGLDFSSEQLAVAASRQELKAKSCYKNIEWIEGDATDL-----  139 (261)
T ss_pred             HHhCCCCCCEEEEECCcC-CHHHHH-HHHHhCCCCEEEEEECCHHHHHHHHHHhhhhhhccCCCeEEEEcccccC-----
Confidence            445778899999998754 555555 6665553 3799999999887776542 1      11111111111111     


Q ss_pred             HHHHHhCCCceEEEeCCC------CHHHHHHHHHhcccCCEEEEEccC
Q 017868          247 KIQKAMGTGIDVSFDCAG------LNKTMSTALGATCAGGKVCLVGMG  288 (365)
Q Consensus       247 ~~~~~~~~~~d~vid~~g------~~~~~~~~~~~l~~~G~~~~~g~~  288 (365)
                         ......+|.|+-..+      ....+..+.+.|+++|++++....
T Consensus       140 ---p~~~~sfD~V~~~~~l~~~~d~~~~l~ei~rvLkpGG~l~i~d~~  184 (261)
T PLN02233        140 ---PFDDCYFDAITMGYGLRNVVDRLKAMQEMYRVLKPGSRVSILDFN  184 (261)
T ss_pred             ---CCCCCCEeEEEEecccccCCCHHHHHHHHHHHcCcCcEEEEEECC
Confidence               011356999976432      134677899999999999887544

>PRK08416 7-alpha-hydroxysteroid dehydrogenase; Provisional

Probab=94.50  E-value=0.5  Score=41.32  Aligned_cols=81  Identities=16%  Similarity=0.186  Sum_probs=45.6

Q ss_pred             CCCEEEEEcC-CHHHHHHHHHHHHHCCCCeEEEE-eCChhHHH-HHHH----cCCC-EEEeCCC-CcccHHHHHHHHHHH
Q 017868          181 PETNVLIMGA-GPIGLVTMLGAPRAFGAPRIVIV-DVDDYRLS-VAKE----IGAD-NIVKVST-NLQDIAEEVEKIQKA  251 (365)
Q Consensus       181 ~g~~vlI~G~-g~~G~~ai~~l~~~~g~~~vi~v-~~~~~~~~-~~~~----~g~~-~~~~~~~-~~~~~~~~i~~~~~~  251 (365)
                      +++++||+|+ +++|.+++..++ ..|++ |+.+ .+++++.+ ..++    .+.. ..+..+- +.++..+.+.++.+.
T Consensus         7 ~~k~vlItGas~gIG~~ia~~l~-~~G~~-v~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~D~~~~~~~~~~~~~~~~~   84 (260)
T PRK08416          7 KGKTLVISGGTRGIGKAIVYEFA-QSGVN-IAFTYNSNVEEANKIAEDLEQKYGIKAKAYPLNILEPETYKELFKKIDED   84 (260)
T ss_pred             CCCEEEEeCCCchHHHHHHHHHH-HCCCE-EEEEcCCCHHHHHHHHHHHHHhcCCceEEEEcCCCCHHHHHHHHHHHHHh
Confidence            5789999987 999999999555 56995 4444 34444432 2222    2322 1222222 223333334433332


Q ss_pred             hCCCceEEEeCCC
Q 017868          252 MGTGIDVSFDCAG  264 (365)
Q Consensus       252 ~~~~~d~vid~~g  264 (365)
                       -+.+|+++.++|
T Consensus        85 -~g~id~lv~nAg   96 (260)
T PRK08416         85 -FDRVDFFISNAI   96 (260)
T ss_pred             -cCCccEEEECcc
Confidence             357999999875

>PF13823 ADH_N_assoc: Alcohol dehydrogenase GroES-associated; PDB: 2DPH_B

Probab=94.50  E-value=0.052  Score=27.78  Aligned_cols=22  Identities=14%  Similarity=0.228  Sum_probs=16.2

Q ss_pred             ceeEEEecCCceEEEEecCCCC
Q 017868           18 NMAAWLLGVNTLKIQPFELPSL   39 (365)
Q Consensus        18 ~~~~~~~~~~~l~~~~~~~p~~   39 (365)
                      |+|+++.++++++++++|.|.+
T Consensus         1 MkAv~y~G~~~v~ve~VpdP~I   22 (23)
T PF13823_consen    1 MKAVVYHGPKDVRVEEVPDPKI   22 (23)
T ss_dssp             -EEEEEEETTEEEEEEE----S
T ss_pred             CcceEEeCCCceEEEECCCccc
Confidence            7899999999999999999976

>PRK08251 short chain dehydrogenase; Provisional

Probab=94.49  E-value=0.58  Score=40.48  Aligned_cols=80  Identities=20%  Similarity=0.276  Sum_probs=47.0

Q ss_pred             CCEEEEEcC-CHHHHHHHHHHHHHCCCCeEEEEeCChhHHHHH-HHc-----CCC-EEEeCCC-CcccHHHHHHHHHHHh
Q 017868          182 ETNVLIMGA-GPIGLVTMLGAPRAFGAPRIVIVDVDDYRLSVA-KEI-----GAD-NIVKVST-NLQDIAEEVEKIQKAM  252 (365)
Q Consensus       182 g~~vlI~G~-g~~G~~ai~~l~~~~g~~~vi~v~~~~~~~~~~-~~~-----g~~-~~~~~~~-~~~~~~~~i~~~~~~~  252 (365)
                      +.++||+|+ |++|..+++.++ ..|+ +++.+++++++.+.+ ..+     +.. ..+..+- +.+++.+.++++.+. 
T Consensus         2 ~k~vlItGas~giG~~la~~l~-~~g~-~v~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~~D~~~~~~~~~~~~~~~~~-   78 (248)
T PRK08251          2 RQKILITGASSGLGAGMAREFA-AKGR-DLALCARRTDRLEELKAELLARYPGIKVAVAALDVNDHDQVFEVFAEFRDE-   78 (248)
T ss_pred             CCEEEEECCCCHHHHHHHHHHH-HcCC-EEEEEeCCHHHHHHHHHHHHhhCCCceEEEEEcCCCCHHHHHHHHHHHHHH-
Confidence            467999987 999999999565 4587 577777777665432 211     211 1222222 222333344443332 


Q ss_pred             CCCceEEEeCCC
Q 017868          253 GTGIDVSFDCAG  264 (365)
Q Consensus       253 ~~~~d~vid~~g  264 (365)
                      -+++|++|.+.|
T Consensus        79 ~~~id~vi~~ag   90 (248)
T PRK08251         79 LGGLDRVIVNAG   90 (248)
T ss_pred             cCCCCEEEECCC
Confidence            357999999886

>PRK06197 short chain dehydrogenase; Provisional

Probab=94.48  E-value=0.33  Score=43.69  Aligned_cols=81  Identities=23%  Similarity=0.319  Sum_probs=46.5

Q ss_pred             CCCEEEEEcC-CHHHHHHHHHHHHHCCCCeEEEEeCChhHHHH-HHHc-----CCC-EEEeCCC-CcccHHHHHHHHHHH
Q 017868          181 PETNVLIMGA-GPIGLVTMLGAPRAFGAPRIVIVDVDDYRLSV-AKEI-----GAD-NIVKVST-NLQDIAEEVEKIQKA  251 (365)
Q Consensus       181 ~g~~vlI~G~-g~~G~~ai~~l~~~~g~~~vi~v~~~~~~~~~-~~~~-----g~~-~~~~~~~-~~~~~~~~i~~~~~~  251 (365)
                      .+.++||+|+ |++|.++++.++ ..|+ .++.+.++.++.+. .+++     +.. ..+..+- +.++..+.+.++.+.
T Consensus        15 ~~k~vlItGas~gIG~~~a~~l~-~~G~-~vi~~~r~~~~~~~~~~~l~~~~~~~~~~~~~~Dl~d~~~v~~~~~~~~~~   92 (306)
T PRK06197         15 SGRVAVVTGANTGLGYETAAALA-AKGA-HVVLAVRNLDKGKAAAARITAATPGADVTLQELDLTSLASVRAAADALRAA   92 (306)
T ss_pred             CCCEEEEcCCCCcHHHHHHHHHH-HCCC-EEEEEeCCHHHHHHHHHHHHHhCCCCceEEEECCCCCHHHHHHHHHHHHhh
Confidence            5678999987 999999999555 5598 56666676655432 2222     111 1222222 222333333333221


Q ss_pred             hCCCceEEEeCCC
Q 017868          252 MGTGIDVSFDCAG  264 (365)
Q Consensus       252 ~~~~~d~vid~~g  264 (365)
                       -+++|++|.++|
T Consensus        93 -~~~iD~li~nAg  104 (306)
T PRK06197         93 -YPRIDLLINNAG  104 (306)
T ss_pred             -CCCCCEEEECCc
Confidence             357999999887

>PRK06114 short chain dehydrogenase; Provisional

Probab=94.47  E-value=0.55  Score=40.90  Aligned_cols=82  Identities=16%  Similarity=0.283  Sum_probs=46.9

Q ss_pred             CCCEEEEEcC-CHHHHHHHHHHHHHCCCCeEEEEeCChh-H-HHH---HHHcCCCE-EEeCCC-CcccHHHHHHHHHHHh
Q 017868          181 PETNVLIMGA-GPIGLVTMLGAPRAFGAPRIVIVDVDDY-R-LSV---AKEIGADN-IVKVST-NLQDIAEEVEKIQKAM  252 (365)
Q Consensus       181 ~g~~vlI~G~-g~~G~~ai~~l~~~~g~~~vi~v~~~~~-~-~~~---~~~~g~~~-~~~~~~-~~~~~~~~i~~~~~~~  252 (365)
                      ++.++||+|+ +++|.++++.+ ...|++ ++.++++++ . .+.   ++..+... .+..+- +.++..+.+.+..+. 
T Consensus         7 ~~k~~lVtG~s~gIG~~ia~~l-~~~G~~-v~~~~r~~~~~~~~~~~~l~~~~~~~~~~~~D~~~~~~i~~~~~~~~~~-   83 (254)
T PRK06114          7 DGQVAFVTGAGSGIGQRIAIGL-AQAGAD-VALFDLRTDDGLAETAEHIEAAGRRAIQIAADVTSKADLRAAVARTEAE-   83 (254)
T ss_pred             CCCEEEEECCCchHHHHHHHHH-HHCCCE-EEEEeCCcchHHHHHHHHHHhcCCceEEEEcCCCCHHHHHHHHHHHHHH-
Confidence            4678999987 99999999955 456984 556655432 2 222   23334221 222222 222333344443332 


Q ss_pred             CCCceEEEeCCCC
Q 017868          253 GTGIDVSFDCAGL  265 (365)
Q Consensus       253 ~~~~d~vid~~g~  265 (365)
                      -+++|++|.+.|.
T Consensus        84 ~g~id~li~~ag~   96 (254)
T PRK06114         84 LGALTLAVNAAGI   96 (254)
T ss_pred             cCCCCEEEECCCC
Confidence            3579999998873

>PRK09242 tropinone reductase; Provisional

Probab=94.46  E-value=0.59  Score=40.74  Aligned_cols=82  Identities=22%  Similarity=0.261  Sum_probs=48.2

Q ss_pred             CCCEEEEEcC-CHHHHHHHHHHHHHCCCCeEEEEeCChhHHHH-HHHc-----CCCE-EEeCCC-CcccHHHHHHHHHHH
Q 017868          181 PETNVLIMGA-GPIGLVTMLGAPRAFGAPRIVIVDVDDYRLSV-AKEI-----GADN-IVKVST-NLQDIAEEVEKIQKA  251 (365)
Q Consensus       181 ~g~~vlI~G~-g~~G~~ai~~l~~~~g~~~vi~v~~~~~~~~~-~~~~-----g~~~-~~~~~~-~~~~~~~~i~~~~~~  251 (365)
                      .+.++||+|+ +++|..++..+ ...|+ .|+.+.+++++.+. ..++     +... .+..+- +..+....+.++.+.
T Consensus         8 ~~k~~lItGa~~gIG~~~a~~l-~~~G~-~v~~~~r~~~~~~~~~~~l~~~~~~~~~~~~~~Dl~~~~~~~~~~~~~~~~   85 (257)
T PRK09242          8 DGQTALITGASKGIGLAIAREF-LGLGA-DVLIVARDADALAQARDELAEEFPEREVHGLAADVSDDEDRRAILDWVEDH   85 (257)
T ss_pred             CCCEEEEeCCCchHHHHHHHHH-HHcCC-EEEEEeCCHHHHHHHHHHHHhhCCCCeEEEEECCCCCHHHHHHHHHHHHHH
Confidence            4678999987 99999999955 45698 46777677665432 2222     2211 122121 222333333333332


Q ss_pred             hCCCceEEEeCCCC
Q 017868          252 MGTGIDVSFDCAGL  265 (365)
Q Consensus       252 ~~~~~d~vid~~g~  265 (365)
                       -+++|+++.+.|.
T Consensus        86 -~g~id~li~~ag~   98 (257)
T PRK09242         86 -WDGLHILVNNAGG   98 (257)
T ss_pred             -cCCCCEEEECCCC
Confidence             3579999999874

>PLN03139 formate dehydrogenase; Provisional

Probab=94.45  E-value=0.68  Score=43.03  Aligned_cols=91  Identities=20%  Similarity=0.213  Sum_probs=60.0

Q ss_pred             CCCEEEEEcCCHHHHHHHHHHHHHCCCCeEEEEeCChhHHHHHHHcCCCEEEeCCCCcccHHHHHHHHHHHhCCCceEEE
Q 017868          181 PETNVLIMGAGPIGLVTMLGAPRAFGAPRIVIVDVDDYRLSVAKEIGADNIVKVSTNLQDIAEEVEKIQKAMGTGIDVSF  260 (365)
Q Consensus       181 ~g~~vlI~G~g~~G~~ai~~l~~~~g~~~vi~v~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~i~~~~~~~~~~~d~vi  260 (365)
                      .|.+|.|+|.|.+|..+++ .++.+|. .+++.+++....+..++.|+...       .++.+.+        ...|+|+
T Consensus       198 ~gktVGIVG~G~IG~~vA~-~L~afG~-~V~~~d~~~~~~~~~~~~g~~~~-------~~l~ell--------~~sDvV~  260 (386)
T PLN03139        198 EGKTVGTVGAGRIGRLLLQ-RLKPFNC-NLLYHDRLKMDPELEKETGAKFE-------EDLDAML--------PKCDVVV  260 (386)
T ss_pred             CCCEEEEEeecHHHHHHHH-HHHHCCC-EEEEECCCCcchhhHhhcCceec-------CCHHHHH--------hhCCEEE
Confidence            6789999999999999999 7788999 57778776544445555554321       1222222        3478888


Q ss_pred             eCCCCHHHHH-----HHHHhcccCCEEEEEccC
Q 017868          261 DCAGLNKTMS-----TALGATCAGGKVCLVGMG  288 (365)
Q Consensus       261 d~~g~~~~~~-----~~~~~l~~~G~~~~~g~~  288 (365)
                      -+........     ..+..|+++..++..+..
T Consensus       261 l~lPlt~~T~~li~~~~l~~mk~ga~lIN~aRG  293 (386)
T PLN03139        261 INTPLTEKTRGMFNKERIAKMKKGVLIVNNARG  293 (386)
T ss_pred             EeCCCCHHHHHHhCHHHHhhCCCCeEEEECCCC
Confidence            7665322222     467788888877777543

>PRK06181 short chain dehydrogenase; Provisional

Probab=94.43  E-value=0.61  Score=40.77  Aligned_cols=80  Identities=25%  Similarity=0.367  Sum_probs=46.2

Q ss_pred             CEEEEEcC-CHHHHHHHHHHHHHCCCCeEEEEeCChhHHHH-H---HHcCCCE-EEeCCC-CcccHHHHHHHHHHHhCCC
Q 017868          183 TNVLIMGA-GPIGLVTMLGAPRAFGAPRIVIVDVDDYRLSV-A---KEIGADN-IVKVST-NLQDIAEEVEKIQKAMGTG  255 (365)
Q Consensus       183 ~~vlI~G~-g~~G~~ai~~l~~~~g~~~vi~v~~~~~~~~~-~---~~~g~~~-~~~~~~-~~~~~~~~i~~~~~~~~~~  255 (365)
                      .++||+|+ |.+|..+++ .+...|+ .|+.+++++++.+. .   +..+... .+..+- +.+++...+.+..+. -++
T Consensus         2 ~~vlVtGasg~iG~~la~-~l~~~g~-~Vi~~~r~~~~~~~~~~~l~~~~~~~~~~~~Dl~~~~~~~~~~~~~~~~-~~~   78 (263)
T PRK06181          2 KVVIITGASEGIGRALAV-RLARAGA-QLVLAARNETRLASLAQELADHGGEALVVPTDVSDAEACERLIEAAVAR-FGG   78 (263)
T ss_pred             CEEEEecCCcHHHHHHHH-HHHHCCC-EEEEEeCCHHHHHHHHHHHHhcCCcEEEEEccCCCHHHHHHHHHHHHHH-cCC
Confidence            57999987 999999999 4456688 57777777655432 2   2233321 122221 122233333333222 247


Q ss_pred             ceEEEeCCCC
Q 017868          256 IDVSFDCAGL  265 (365)
Q Consensus       256 ~d~vid~~g~  265 (365)
                      +|++|.+.|.
T Consensus        79 id~vi~~ag~   88 (263)
T PRK06181         79 IDILVNNAGI   88 (263)
T ss_pred             CCEEEECCCc
Confidence            9999998873

>PRK05653 fabG 3-ketoacyl-(acyl-carrier-protein) reductase; Validated

Probab=94.42  E-value=0.55  Score=40.35  Aligned_cols=82  Identities=23%  Similarity=0.300  Sum_probs=48.8

Q ss_pred             CCCEEEEEcC-CHHHHHHHHHHHHHCCCCeEEEEeCChhHHHH----HHHcCCCEEE-eCCC-CcccHHHHHHHHHHHhC
Q 017868          181 PETNVLIMGA-GPIGLVTMLGAPRAFGAPRIVIVDVDDYRLSV----AKEIGADNIV-KVST-NLQDIAEEVEKIQKAMG  253 (365)
Q Consensus       181 ~g~~vlI~G~-g~~G~~ai~~l~~~~g~~~vi~v~~~~~~~~~----~~~~g~~~~~-~~~~-~~~~~~~~i~~~~~~~~  253 (365)
                      ++.++||+|+ |.+|..+++.++ ..|++ |+.+.+++++.+.    ++..+....+ ..+- +..++.+.+.++... -
T Consensus         4 ~~~~ilItGasg~iG~~l~~~l~-~~g~~-v~~~~r~~~~~~~~~~~~~~~~~~~~~~~~D~~~~~~~~~~~~~~~~~-~   80 (246)
T PRK05653          4 QGKTALVTGASRGIGRAIALRLA-ADGAK-VVIYDSNEEAAEALAAELRAAGGEARVLVFDVSDEAAVRALIEAAVEA-F   80 (246)
T ss_pred             CCCEEEEECCCcHHHHHHHHHHH-HCCCE-EEEEeCChhHHHHHHHHHHhcCCceEEEEccCCCHHHHHHHHHHHHHH-h
Confidence            3568999987 999999999554 56985 7777777765432    2333432221 1111 223333444433322 2


Q ss_pred             CCceEEEeCCCC
Q 017868          254 TGIDVSFDCAGL  265 (365)
Q Consensus       254 ~~~d~vid~~g~  265 (365)
                      .++|.++.++|.
T Consensus        81 ~~id~vi~~ag~   92 (246)
T PRK05653         81 GALDILVNNAGI   92 (246)
T ss_pred             CCCCEEEECCCc
Confidence            578999998864

>PRK12749 quinate/shikimate dehydrogenase; Reviewed

Probab=94.41  E-value=0.32  Score=43.36  Aligned_cols=46  Identities=15%  Similarity=0.226  Sum_probs=33.8

Q ss_pred             CCCEEEEEcCCHHHHHHHHHHHHHCCCCeEEEEeCCh---hHH-HHHHHcC
Q 017868          181 PETNVLIMGAGPIGLVTMLGAPRAFGAPRIVIVDVDD---YRL-SVAKEIG  227 (365)
Q Consensus       181 ~g~~vlI~G~g~~G~~ai~~l~~~~g~~~vi~v~~~~---~~~-~~~~~~g  227 (365)
                      ++.++||.|+|+.+.+++. .+...|++.+.++.+++   +|. ++++.++
T Consensus       123 ~~k~vlvlGaGGaarAi~~-~l~~~g~~~i~i~nRt~~~~~ka~~la~~~~  172 (288)
T PRK12749        123 KGKTMVLLGAGGASTAIGA-QGAIEGLKEIKLFNRRDEFFDKALAFAQRVN  172 (288)
T ss_pred             CCCEEEEECCcHHHHHHHH-HHHHCCCCEEEEEeCCccHHHHHHHHHHHhh
Confidence            5679999999988988777 55567998888888874   343 3445554

>PRK06398 aldose dehydrogenase; Validated

Probab=94.39  E-value=0.29  Score=42.84  Aligned_cols=75  Identities=16%  Similarity=0.301  Sum_probs=44.9

Q ss_pred             CCCEEEEEcC-CHHHHHHHHHHHHHCCCCeEEEEeCChhHHHHHHHcCCCEEEeCCC-CcccHHHHHHHHHHHhCCCceE
Q 017868          181 PETNVLIMGA-GPIGLVTMLGAPRAFGAPRIVIVDVDDYRLSVAKEIGADNIVKVST-NLQDIAEEVEKIQKAMGTGIDV  258 (365)
Q Consensus       181 ~g~~vlI~G~-g~~G~~ai~~l~~~~g~~~vi~v~~~~~~~~~~~~~g~~~~~~~~~-~~~~~~~~i~~~~~~~~~~~d~  258 (365)
                      .|.++||+|+ +++|.+++..+ ...|+ +|+.+++++.+..     .. ..+..+- +..+..+.+.+..+. -+.+|+
T Consensus         5 ~gk~vlItGas~gIG~~ia~~l-~~~G~-~Vi~~~r~~~~~~-----~~-~~~~~D~~~~~~i~~~~~~~~~~-~~~id~   75 (258)
T PRK06398          5 KDKVAIVTGGSQGIGKAVVNRL-KEEGS-NVINFDIKEPSYN-----DV-DYFKVDVSNKEQVIKGIDYVISK-YGRIDI   75 (258)
T ss_pred             CCCEEEEECCCchHHHHHHHHH-HHCCC-eEEEEeCCccccC-----ce-EEEEccCCCHHHHHHHHHHHHHH-cCCCCE
Confidence            4679999987 99999999944 55698 5666666554321     11 1122222 223333444444332 357999


Q ss_pred             EEeCCC
Q 017868          259 SFDCAG  264 (365)
Q Consensus       259 vid~~g  264 (365)
                      +|.+.|
T Consensus        76 li~~Ag   81 (258)
T PRK06398         76 LVNNAG   81 (258)
T ss_pred             EEECCC
Confidence            999887

>PRK14103 trans-aconitate 2-methyltransferase; Provisional

Probab=94.36  E-value=0.76  Score=40.19  Aligned_cols=98  Identities=19%  Similarity=0.246  Sum_probs=65.2

Q ss_pred             HHhcCCCCCCEEEEEcCCHHHHHHHHHHHHHCCCCeEEEEeCChhHHHHHHHcCCCEEEeCCCCcccHHHHHHHHHHHhC
Q 017868          174 CRRANIGPETNVLIMGAGPIGLVTMLGAPRAFGAPRIVIVDVDDYRLSVAKEIGADNIVKVSTNLQDIAEEVEKIQKAMG  253 (365)
Q Consensus       174 ~~~~~~~~g~~vlI~G~g~~G~~ai~~l~~~~g~~~vi~v~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~i~~~~~~~~  253 (365)
                      +......++.+||=.|+|. |..+.. +++......+++++.++.-.+.+++.+.... .     .+.    .++.  ..
T Consensus        22 l~~l~~~~~~~vLDlGcG~-G~~~~~-l~~~~p~~~v~gvD~s~~~~~~a~~~~~~~~-~-----~d~----~~~~--~~   87 (255)
T PRK14103         22 LARVGAERARRVVDLGCGP-GNLTRY-LARRWPGAVIEALDSSPEMVAAARERGVDAR-T-----GDV----RDWK--PK   87 (255)
T ss_pred             HHhCCCCCCCEEEEEcCCC-CHHHHH-HHHHCCCCEEEEEECCHHHHHHHHhcCCcEE-E-----cCh----hhCC--CC
Confidence            3455667889999898865 666666 6555432379999999998888877665432 1     121    1111  13


Q ss_pred             CCceEEEeCCC-----C-HHHHHHHHHhcccCCEEEEE
Q 017868          254 TGIDVSFDCAG-----L-NKTMSTALGATCAGGKVCLV  285 (365)
Q Consensus       254 ~~~d~vid~~g-----~-~~~~~~~~~~l~~~G~~~~~  285 (365)
                      ..+|+|+....     . ...+..+.+.|+++|.+++.
T Consensus        88 ~~fD~v~~~~~l~~~~d~~~~l~~~~~~LkpgG~l~~~  125 (255)
T PRK14103         88 PDTDVVVSNAALQWVPEHADLLVRWVDELAPGSWIAVQ  125 (255)
T ss_pred             CCceEEEEehhhhhCCCHHHHHHHHHHhCCCCcEEEEE
Confidence            57999987432     1 34566788999999998865

>PF01209 Ubie_methyltran: ubiE/COQ5 methyltransferase family; InterPro: IPR004033 A number of methyltransferases have been shown to share regions of similarities []

Probab=94.35  E-value=0.23  Score=42.84  Aligned_cols=105  Identities=24%  Similarity=0.340  Sum_probs=60.6

Q ss_pred             HhcCCCCCCEEEEEcCCHHHHHHHHHHHHHCCC-CeEEEEeCChhHHHHHHH----cCCCEEEeCCCCcccHHHHHHHHH
Q 017868          175 RRANIGPETNVLIMGAGPIGLVTMLGAPRAFGA-PRIVIVDVDDYRLSVAKE----IGADNIVKVSTNLQDIAEEVEKIQ  249 (365)
Q Consensus       175 ~~~~~~~g~~vlI~G~g~~G~~ai~~l~~~~g~-~~vi~v~~~~~~~~~~~~----~g~~~~~~~~~~~~~~~~~i~~~~  249 (365)
                      +....++|++||=.|+|. |..+.. +++..+. ..|+++|.+++-.+.+++    .+...+.-...+.+++.       
T Consensus        41 ~~~~~~~g~~vLDv~~Gt-G~~~~~-l~~~~~~~~~v~~vD~s~~ML~~a~~k~~~~~~~~i~~v~~da~~lp-------  111 (233)
T PF01209_consen   41 KLLGLRPGDRVLDVACGT-GDVTRE-LARRVGPNGKVVGVDISPGMLEVARKKLKREGLQNIEFVQGDAEDLP-------  111 (233)
T ss_dssp             HHHT--S--EEEEET-TT-SHHHHH-HGGGSS---EEEEEES-HHHHHHHHHHHHHTT--SEEEEE-BTTB---------
T ss_pred             hccCCCCCCEEEEeCCCh-HHHHHH-HHHHCCCccEEEEecCCHHHHHHHHHHHHhhCCCCeeEEEcCHHHhc-------
Confidence            445678999999887654 666667 6666653 379999999987766543    23322211122223321       


Q ss_pred             HHhCCCceEEEeCCCC------HHHHHHHHHhcccCCEEEEEccCC
Q 017868          250 KAMGTGIDVSFDCAGL------NKTMSTALGATCAGGKVCLVGMGH  289 (365)
Q Consensus       250 ~~~~~~~d~vid~~g~------~~~~~~~~~~l~~~G~~~~~g~~~  289 (365)
                       .....+|.|.-+.|-      ...+....++|+|||+++++....
T Consensus       112 -~~d~sfD~v~~~fglrn~~d~~~~l~E~~RVLkPGG~l~ile~~~  156 (233)
T PF01209_consen  112 -FPDNSFDAVTCSFGLRNFPDRERALREMYRVLKPGGRLVILEFSK  156 (233)
T ss_dssp             -S-TT-EEEEEEES-GGG-SSHHHHHHHHHHHEEEEEEEEEEEEEB
T ss_pred             -CCCCceeEEEHHhhHHhhCCHHHHHHHHHHHcCCCeEEEEeeccC
Confidence             114679999976663      356778999999999999886543

Apart from the ubiquinone/menaquinone biosynthesis methyltransferases (for example, the C-methyltransferase from the ubiE gene of Escherichia coli), the ubiquinone biosynthesis methyltransferases (for example, the C-methyltransferase from the COQ5 gene of Saccharomyces cerevisiae) and the menaquinone biosynthesis methyltransferases (for example, the C-methyltransferase from the MENH gene of Bacillus subtilis), this family also includes methyltransferases involved in biotin and sterol biosynthesis and in phosphatidylethanolamine methylation.; GO: 0008168 methyltransferase activity; PDB: 1VL5_C.

>PF08704 GCD14: tRNA methyltransferase complex GCD14 subunit; InterPro: IPR014816 GCD14 is a subunit of the tRNA methyltransferase complex and is required for 1-methyladenosine modification and maturation of initiator methionyl-tRNA []

Probab=94.35  E-value=0.16  Score=44.00  Aligned_cols=109  Identities=26%  Similarity=0.386  Sum_probs=62.5

Q ss_pred             HHhcCCCCCCEEEEEcCCHHHHHHHHHHHHHCC-CCeEEEEeCChhHHHHH----HHcCCCEEEeCCCCcccHHHHHHHH
Q 017868          174 CRRANIGPETNVLIMGAGPIGLVTMLGAPRAFG-APRIVIVDVDDYRLSVA----KEIGADNIVKVSTNLQDIAEEVEKI  248 (365)
Q Consensus       174 ~~~~~~~~g~~vlI~G~g~~G~~ai~~l~~~~g-~~~vi~v~~~~~~~~~~----~~~g~~~~~~~~~~~~~~~~~i~~~  248 (365)
                      +...++.||++||=.|.|+ |.++.. +++..| -.+|+..+.++++.+.+    +..|....+.+..  .|..+.-  +
T Consensus        33 ~~~l~i~pG~~VlEaGtGS-G~lt~~-l~r~v~p~G~v~t~E~~~~~~~~A~~n~~~~gl~~~v~~~~--~Dv~~~g--~  106 (247)
T PF08704_consen   33 LMRLDIRPGSRVLEAGTGS-GSLTHA-LARAVGPTGHVYTYEFREDRAEKARKNFERHGLDDNVTVHH--RDVCEEG--F  106 (247)
T ss_dssp             HHHTT--TT-EEEEE--TT-SHHHHH-HHHHHTTTSEEEEEESSHHHHHHHHHHHHHTTCCTTEEEEE--S-GGCG----
T ss_pred             HHHcCCCCCCEEEEecCCc-HHHHHH-HHHHhCCCeEEEccccCHHHHHHHHHHHHHcCCCCCceeEe--cceeccc--c
Confidence            4568899999999987643 555555 555544 33799999999887654    4456543221111  1221100  0


Q ss_pred             HHHhCCCceEE-EeCCCCHHHHHHHHHhc-ccCCEEEEEccC
Q 017868          249 QKAMGTGIDVS-FDCAGLNKTMSTALGAT-CAGGKVCLVGMG  288 (365)
Q Consensus       249 ~~~~~~~~d~v-id~~g~~~~~~~~~~~l-~~~G~~~~~g~~  288 (365)
                      .+.....+|.| +|--.....+..+.++| +++|+++.+...
T Consensus       107 ~~~~~~~~DavfLDlp~Pw~~i~~~~~~L~~~gG~i~~fsP~  148 (247)
T PF08704_consen  107 DEELESDFDAVFLDLPDPWEAIPHAKRALKKPGGRICCFSPC  148 (247)
T ss_dssp             STT-TTSEEEEEEESSSGGGGHHHHHHHE-EEEEEEEEEESS
T ss_pred             cccccCcccEEEEeCCCHHHHHHHHHHHHhcCCceEEEECCC
Confidence            00013567876 56555456788999999 899999998643

; GO: 0016429 tRNA (adenine-N1-)-methyltransferase activity, 0030488 tRNA methylation; PDB: 2YVL_C 1YB2_A 2B25_B 1O54_A 2PWY_B 1I9G_A 3LGA_B 3LHD_C 3MB5_A.

>PRK08993 2-deoxy-D-gluconate 3-dehydrogenase; Validated

Probab=94.35  E-value=0.57  Score=40.76  Aligned_cols=82  Identities=18%  Similarity=0.261  Sum_probs=47.7

Q ss_pred             CCCEEEEEcC-CHHHHHHHHHHHHHCCCCeEEEEeCChh--HHHHHHHcCCCE-EEeCCC-CcccHHHHHHHHHHHhCCC
Q 017868          181 PETNVLIMGA-GPIGLVTMLGAPRAFGAPRIVIVDVDDY--RLSVAKEIGADN-IVKVST-NLQDIAEEVEKIQKAMGTG  255 (365)
Q Consensus       181 ~g~~vlI~G~-g~~G~~ai~~l~~~~g~~~vi~v~~~~~--~~~~~~~~g~~~-~~~~~~-~~~~~~~~i~~~~~~~~~~  255 (365)
                      .|.++||+|+ +++|.++++.++ ..|++ |+.++.++.  ..+.+++++... .+..+- +.++....+.++.+. .++
T Consensus         9 ~~k~~lItG~~~gIG~a~a~~l~-~~G~~-vv~~~~~~~~~~~~~~~~~~~~~~~~~~Dl~~~~~~~~~~~~~~~~-~~~   85 (253)
T PRK08993          9 EGKVAVVTGCDTGLGQGMALGLA-EAGCD-IVGINIVEPTETIEQVTALGRRFLSLTADLRKIDGIPALLERAVAE-FGH   85 (253)
T ss_pred             CCCEEEEECCCchHHHHHHHHHH-HCCCE-EEEecCcchHHHHHHHHhcCCeEEEEECCCCCHHHHHHHHHHHHHH-hCC
Confidence            4678999987 999999999554 55994 566654332  223334444321 222222 223344444444332 357


Q ss_pred             ceEEEeCCCC
Q 017868          256 IDVSFDCAGL  265 (365)
Q Consensus       256 ~d~vid~~g~  265 (365)
                      +|++|.++|.
T Consensus        86 ~D~li~~Ag~   95 (253)
T PRK08993         86 IDILVNNAGL   95 (253)
T ss_pred             CCEEEECCCC
Confidence            9999998873

>PRK05884 short chain dehydrogenase; Provisional

Probab=94.34  E-value=0.29  Score=41.79  Aligned_cols=74  Identities=20%  Similarity=0.288  Sum_probs=44.3

Q ss_pred             EEEEEcC-CHHHHHHHHHHHHHCCCCeEEEEeCChhHHHH-HHHcCCCEEEeCCCCc-ccHHHHHHHHHHHhCCCceEEE
Q 017868          184 NVLIMGA-GPIGLVTMLGAPRAFGAPRIVIVDVDDYRLSV-AKEIGADNIVKVSTNL-QDIAEEVEKIQKAMGTGIDVSF  260 (365)
Q Consensus       184 ~vlI~G~-g~~G~~ai~~l~~~~g~~~vi~v~~~~~~~~~-~~~~g~~~~~~~~~~~-~~~~~~i~~~~~~~~~~~d~vi  260 (365)
                      +++|+|+ +++|.++++.++ ..|+ .|+.+++++++.+. .++++... +..+-.+ +++.+.++.+    ...+|+++
T Consensus         2 ~vlItGas~giG~~ia~~l~-~~g~-~v~~~~r~~~~~~~~~~~~~~~~-~~~D~~~~~~v~~~~~~~----~~~id~lv   74 (223)
T PRK05884          2 EVLVTGGDTDLGRTIAEGFR-NDGH-KVTLVGARRDDLEVAAKELDVDA-IVCDNTDPASLEEARGLF----PHHLDTIV   74 (223)
T ss_pred             eEEEEeCCchHHHHHHHHHH-HCCC-EEEEEeCCHHHHHHHHHhccCcE-EecCCCCHHHHHHHHHHH----hhcCcEEE
Confidence            5899987 999999999554 5688 56667777766543 35555432 2222222 2222222222    23689999


Q ss_pred             eCCC
Q 017868          261 DCAG  264 (365)
Q Consensus       261 d~~g  264 (365)
                      .+.|
T Consensus        75 ~~ag   78 (223)
T PRK05884         75 NVPA   78 (223)
T ss_pred             ECCC
Confidence            8765

>PRK07832 short chain dehydrogenase; Provisional

Probab=94.33  E-value=0.53  Score=41.48  Aligned_cols=78  Identities=27%  Similarity=0.410  Sum_probs=45.4

Q ss_pred             EEEEEcC-CHHHHHHHHHHHHHCCCCeEEEEeCChhHHHH-H---HHcCCCEE----EeCCCCcccHHHHHHHHHHHhCC
Q 017868          184 NVLIMGA-GPIGLVTMLGAPRAFGAPRIVIVDVDDYRLSV-A---KEIGADNI----VKVSTNLQDIAEEVEKIQKAMGT  254 (365)
Q Consensus       184 ~vlI~G~-g~~G~~ai~~l~~~~g~~~vi~v~~~~~~~~~-~---~~~g~~~~----~~~~~~~~~~~~~i~~~~~~~~~  254 (365)
                      ++||+|+ |++|..+++.++ ..|++ |+.+++++++.+. .   +..+....    .++. +.++....+.++.+. .+
T Consensus         2 ~vlItGas~giG~~la~~la-~~G~~-vv~~~r~~~~~~~~~~~~~~~~~~~~~~~~~D~~-~~~~~~~~~~~~~~~-~~   77 (272)
T PRK07832          2 RCFVTGAASGIGRATALRLA-AQGAE-LFLTDRDADGLAQTVADARALGGTVPEHRALDIS-DYDAVAAFAADIHAA-HG   77 (272)
T ss_pred             EEEEeCCCCHHHHHHHHHHH-HCCCE-EEEEeCCHHHHHHHHHHHHhcCCCcceEEEeeCC-CHHHHHHHHHHHHHh-cC
Confidence            6899987 999999999555 56984 6667776655432 2   22333211    2221 112222233333222 35


Q ss_pred             CceEEEeCCCC
Q 017868          255 GIDVSFDCAGL  265 (365)
Q Consensus       255 ~~d~vid~~g~  265 (365)
                      ++|++|.+.|.
T Consensus        78 ~id~lv~~ag~   88 (272)
T PRK07832         78 SMDVVMNIAGI   88 (272)
T ss_pred             CCCEEEECCCC
Confidence            79999998873

>PRK01683 trans-aconitate 2-methyltransferase; Provisional

Probab=94.33  E-value=0.7  Score=40.45  Aligned_cols=99  Identities=24%  Similarity=0.276  Sum_probs=64.5

Q ss_pred             HHhcCCCCCCEEEEEcCCHHHHHHHHHHHHHCCCCeEEEEeCChhHHHHHHHcCC-CEEEeCCCCcccHHHHHHHHHHHh
Q 017868          174 CRRANIGPETNVLIMGAGPIGLVTMLGAPRAFGAPRIVIVDVDDYRLSVAKEIGA-DNIVKVSTNLQDIAEEVEKIQKAM  252 (365)
Q Consensus       174 ~~~~~~~~g~~vlI~G~g~~G~~ai~~l~~~~g~~~vi~v~~~~~~~~~~~~~g~-~~~~~~~~~~~~~~~~i~~~~~~~  252 (365)
                      +....++++++||=.|+|. |..+.. +++..+...+++++.++...+.+++.-. ...+.  .   +..    ++.  .
T Consensus        24 l~~~~~~~~~~vLDiGcG~-G~~~~~-la~~~~~~~v~gvD~s~~~i~~a~~~~~~~~~~~--~---d~~----~~~--~   90 (258)
T PRK01683         24 LARVPLENPRYVVDLGCGP-GNSTEL-LVERWPAARITGIDSSPAMLAEARSRLPDCQFVE--A---DIA----SWQ--P   90 (258)
T ss_pred             HhhCCCcCCCEEEEEcccC-CHHHHH-HHHHCCCCEEEEEECCHHHHHHHHHhCCCCeEEE--C---chh----ccC--C
Confidence            3445667889999998754 666666 6666554589999999988887765422 11222  1   111    111  1


Q ss_pred             CCCceEEEeCCC------CHHHHHHHHHhcccCCEEEEE
Q 017868          253 GTGIDVSFDCAG------LNKTMSTALGATCAGGKVCLV  285 (365)
Q Consensus       253 ~~~~d~vid~~g------~~~~~~~~~~~l~~~G~~~~~  285 (365)
                      ...+|+|+....      ....+..+.++|+++|.+++.
T Consensus        91 ~~~fD~v~~~~~l~~~~d~~~~l~~~~~~LkpgG~~~~~  129 (258)
T PRK01683         91 PQALDLIFANASLQWLPDHLELFPRLVSLLAPGGVLAVQ  129 (258)
T ss_pred             CCCccEEEEccChhhCCCHHHHHHHHHHhcCCCcEEEEE
Confidence            357999986433      134677888999999998875

>PRK09186 flagellin modification protein A; Provisional

Probab=94.32  E-value=0.41  Score=41.59  Aligned_cols=81  Identities=22%  Similarity=0.359  Sum_probs=47.8

Q ss_pred             CCCEEEEEcC-CHHHHHHHHHHHHHCCCCeEEEEeCChhHHH-HHHHc----CCCE--EEeCCC-CcccHHHHHHHHHHH
Q 017868          181 PETNVLIMGA-GPIGLVTMLGAPRAFGAPRIVIVDVDDYRLS-VAKEI----GADN--IVKVST-NLQDIAEEVEKIQKA  251 (365)
Q Consensus       181 ~g~~vlI~G~-g~~G~~ai~~l~~~~g~~~vi~v~~~~~~~~-~~~~~----g~~~--~~~~~~-~~~~~~~~i~~~~~~  251 (365)
                      ++.++||+|+ |.+|.+++..+ ...|+ .++.+.+++++.+ ..+++    +...  .+..+- +..++.+.+.+..+.
T Consensus         3 ~~k~vlItGas~giG~~~a~~l-~~~g~-~v~~~~r~~~~~~~~~~~l~~~~~~~~~~~~~~Dl~d~~~~~~~~~~~~~~   80 (256)
T PRK09186          3 KGKTILITGAGGLIGSALVKAI-LEAGG-IVIAADIDKEALNELLESLGKEFKSKKLSLVELDITDQESLEEFLSKSAEK   80 (256)
T ss_pred             CCCEEEEECCCchHHHHHHHHH-HHCCC-EEEEEecChHHHHHHHHHHHhhcCCCceeEEEecCCCHHHHHHHHHHHHHH
Confidence            4688999987 99999999945 45698 4666767666543 33333    2221  112222 223333344443332


Q ss_pred             hCCCceEEEeCCC
Q 017868          252 MGTGIDVSFDCAG  264 (365)
Q Consensus       252 ~~~~~d~vid~~g  264 (365)
                       .+++|++|.+.+
T Consensus        81 -~~~id~vi~~A~   92 (256)
T PRK09186         81 -YGKIDGAVNCAY   92 (256)
T ss_pred             -cCCccEEEECCc
Confidence             357999999875

>PLN02823 spermine synthase

Probab=94.32  E-value=0.59  Score=42.59  Aligned_cols=97  Identities=18%  Similarity=0.201  Sum_probs=60.4

Q ss_pred             CCCEEEEEcCCHHHHHHHHHHHHHCCCCeEEEEeCChhHHHHHHHcCC-C-------EEEeCCCCcccHHHHHHHHHHHh
Q 017868          181 PETNVLIMGAGPIGLVTMLGAPRAFGAPRIVIVDVDDYRLSVAKEIGA-D-------NIVKVSTNLQDIAEEVEKIQKAM  252 (365)
Q Consensus       181 ~g~~vlI~G~g~~G~~ai~~l~~~~g~~~vi~v~~~~~~~~~~~~~g~-~-------~~~~~~~~~~~~~~~i~~~~~~~  252 (365)
                      ...+|||.|+|. |..+.. +++..+.+++++++.+++-.++++++-. .       .+-.+.   .|-...++    ..
T Consensus       103 ~pk~VLiiGgG~-G~~~re-~l~~~~~~~v~~VEiD~~vv~lar~~~~~~~~~~~dprv~v~~---~Da~~~L~----~~  173 (336)
T PLN02823        103 NPKTVFIMGGGE-GSTARE-VLRHKTVEKVVMCDIDQEVVDFCRKHLTVNREAFCDKRLELII---NDARAELE----KR  173 (336)
T ss_pred             CCCEEEEECCCc-hHHHHH-HHhCCCCCeEEEEECCHHHHHHHHHhcccccccccCCceEEEE---ChhHHHHh----hC
Confidence            446899998764 555556 6566677789999999999999877431 1       111111   22222332    23


Q ss_pred             CCCceEEEeCCCC------------HHHHH-HHHHhcccCCEEEEEc
Q 017868          253 GTGIDVSFDCAGL------------NKTMS-TALGATCAGGKVCLVG  286 (365)
Q Consensus       253 ~~~~d~vid~~g~------------~~~~~-~~~~~l~~~G~~~~~g  286 (365)
                      .+.+|+||--...            .+-+. .+.++|+++|.++...
T Consensus       174 ~~~yDvIi~D~~dp~~~~~~~~Lyt~eF~~~~~~~~L~p~Gvlv~q~  220 (336)
T PLN02823        174 DEKFDVIIGDLADPVEGGPCYQLYTKSFYERIVKPKLNPGGIFVTQA  220 (336)
T ss_pred             CCCccEEEecCCCccccCcchhhccHHHHHHHHHHhcCCCcEEEEec
Confidence            5689998653211            12344 5778999999988653

>PRK12936 3-ketoacyl-(acyl-carrier-protein) reductase NodG; Reviewed

Probab=94.31  E-value=0.51  Score=40.63  Aligned_cols=82  Identities=23%  Similarity=0.282  Sum_probs=48.3

Q ss_pred             CCCEEEEEcC-CHHHHHHHHHHHHHCCCCeEEEEeCChhHHHH-HHHcCCCE-EEeCCC-CcccHHHHHHHHHHHhCCCc
Q 017868          181 PETNVLIMGA-GPIGLVTMLGAPRAFGAPRIVIVDVDDYRLSV-AKEIGADN-IVKVST-NLQDIAEEVEKIQKAMGTGI  256 (365)
Q Consensus       181 ~g~~vlI~G~-g~~G~~ai~~l~~~~g~~~vi~v~~~~~~~~~-~~~~g~~~-~~~~~~-~~~~~~~~i~~~~~~~~~~~  256 (365)
                      ++.++||+|+ |.+|..++..++ ..|+ .|+..+++.++.+. ...++... .+..+- +.+++.+.+.++.+. -+++
T Consensus         5 ~~~~vlItGa~g~iG~~la~~l~-~~g~-~v~~~~~~~~~~~~~~~~~~~~~~~~~~D~~~~~~~~~~~~~~~~~-~~~i   81 (245)
T PRK12936          5 SGRKALVTGASGGIGEEIARLLH-AQGA-IVGLHGTRVEKLEALAAELGERVKIFPANLSDRDEVKALGQKAEAD-LEGV   81 (245)
T ss_pred             CCCEEEEECCCChHHHHHHHHHH-HCCC-EEEEEcCCHHHHHHHHHHhCCceEEEEccCCCHHHHHHHHHHHHHH-cCCC
Confidence            4678999987 999999999554 5688 56666666655543 34444321 222222 222333333333322 3579


Q ss_pred             eEEEeCCCC
Q 017868          257 DVSFDCAGL  265 (365)
Q Consensus       257 d~vid~~g~  265 (365)
                      |.+|.++|.
T Consensus        82 d~vi~~ag~   90 (245)
T PRK12936         82 DILVNNAGI   90 (245)
T ss_pred             CEEEECCCC
Confidence            999998873

>PRK12747 short chain dehydrogenase; Provisional

Probab=94.31  E-value=1.3  Score=38.41  Aligned_cols=38  Identities=18%  Similarity=0.059  Sum_probs=26.2

Q ss_pred             CCCEEEEEcC-CHHHHHHHHHHHHHCCCCeEEEEeCChhH
Q 017868          181 PETNVLIMGA-GPIGLVTMLGAPRAFGAPRIVIVDVDDYR  219 (365)
Q Consensus       181 ~g~~vlI~G~-g~~G~~ai~~l~~~~g~~~vi~v~~~~~~  219 (365)
                      .+.++||+|+ +++|.++++.+ ...|+++++...+++++
T Consensus         3 ~~k~~lItGas~gIG~~ia~~l-~~~G~~v~~~~~~~~~~   41 (252)
T PRK12747          3 KGKVALVTGASRGIGRAIAKRL-ANDGALVAIHYGNRKEE   41 (252)
T ss_pred             CCCEEEEeCCCChHHHHHHHHH-HHCCCeEEEEcCCCHHH
Confidence            4678999987 99999999945 56698543333344333

>PRK06914 short chain dehydrogenase; Provisional

Probab=94.30  E-value=0.59  Score=41.31  Aligned_cols=80  Identities=16%  Similarity=0.221  Sum_probs=46.8

Q ss_pred             CCEEEEEcC-CHHHHHHHHHHHHHCCCCeEEEEeCChhHHHHH----HHcCC---CEEEeCCC-CcccHHHHHHHHHHHh
Q 017868          182 ETNVLIMGA-GPIGLVTMLGAPRAFGAPRIVIVDVDDYRLSVA----KEIGA---DNIVKVST-NLQDIAEEVEKIQKAM  252 (365)
Q Consensus       182 g~~vlI~G~-g~~G~~ai~~l~~~~g~~~vi~v~~~~~~~~~~----~~~g~---~~~~~~~~-~~~~~~~~i~~~~~~~  252 (365)
                      +.++||+|+ |.+|..++..++ ..|+ .|+++++++++.+.+    +..+.   ...+..+- +.+++.. +.++.+. 
T Consensus         3 ~k~~lItGasg~iG~~la~~l~-~~G~-~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~~D~~d~~~~~~-~~~~~~~-   78 (280)
T PRK06914          3 KKIAIVTGASSGFGLLTTLELA-KKGY-LVIATMRNPEKQENLLSQATQLNLQQNIKVQQLDVTDQNSIHN-FQLVLKE-   78 (280)
T ss_pred             CCEEEEECCCchHHHHHHHHHH-hCCC-EEEEEeCCHHHHHHHHHHHHhcCCCCceeEEecCCCCHHHHHH-HHHHHHh-
Confidence            567999987 999999999554 5598 566676766554332    22221   11222222 2233333 4444332 


Q ss_pred             CCCceEEEeCCCC
Q 017868          253 GTGIDVSFDCAGL  265 (365)
Q Consensus       253 ~~~~d~vid~~g~  265 (365)
                      .+++|+++.++|.
T Consensus        79 ~~~id~vv~~ag~   91 (280)
T PRK06914         79 IGRIDLLVNNAGY   91 (280)
T ss_pred             cCCeeEEEECCcc
Confidence            3578999998873

>COG0686 Ald Alanine dehydrogenase [Amino acid transport and metabolism]

Probab=94.29  E-value=0.32  Score=42.95  Aligned_cols=96  Identities=15%  Similarity=0.243  Sum_probs=67.0

Q ss_pred             CCEEEEEcCCHHHHHHHHHHHHHCCCCeEEEEeCChhHHHHHHHcCCCEEEeCCCCcccHHHHHHHHHHHhCCCceEEEe
Q 017868          182 ETNVLIMGAGPIGLVTMLGAPRAFGAPRIVIVDVDDYRLSVAKEIGADNIVKVSTNLQDIAEEVEKIQKAMGTGIDVSFD  261 (365)
Q Consensus       182 g~~vlI~G~g~~G~~ai~~l~~~~g~~~vi~v~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~i~~~~~~~~~~~d~vid  261 (365)
                      ..+|.|+|+|.+|.-++. +|.-+|+ .|...+.+.+|.+.++.+-...+..+-++..    .+++.    -.++|++|.
T Consensus       168 ~~kv~iiGGGvvgtnaAk-iA~glgA-~Vtild~n~~rl~~ldd~f~~rv~~~~st~~----~iee~----v~~aDlvIg  237 (371)
T COG0686         168 PAKVVVLGGGVVGTNAAK-IAIGLGA-DVTILDLNIDRLRQLDDLFGGRVHTLYSTPS----NIEEA----VKKADLVIG  237 (371)
T ss_pred             CccEEEECCccccchHHH-HHhccCC-eeEEEecCHHHHhhhhHhhCceeEEEEcCHH----HHHHH----hhhccEEEE
Confidence            346788899999999999 8888899 5777889999998887754433333223222    33332    247899998


Q ss_pred             CCCC------HHHHHHHHHhcccCCEEEEEcc
Q 017868          262 CAGL------NKTMSTALGATCAGGKVCLVGM  287 (365)
Q Consensus       262 ~~g~------~~~~~~~~~~l~~~G~~~~~g~  287 (365)
                      ++=.      .....+.++.|.+++.++.+..
T Consensus       238 aVLIpgakaPkLvt~e~vk~MkpGsVivDVAi  269 (371)
T COG0686         238 AVLIPGAKAPKLVTREMVKQMKPGSVIVDVAI  269 (371)
T ss_pred             EEEecCCCCceehhHHHHHhcCCCcEEEEEEE
Confidence            6531      1244567899999999998863

>PRK06720 hypothetical protein; Provisional

Probab=94.27  E-value=1.1  Score=36.58  Aligned_cols=82  Identities=23%  Similarity=0.311  Sum_probs=47.3

Q ss_pred             CCCEEEEEcC-CHHHHHHHHHHHHHCCCCeEEEEeCChhHHHH-HH---HcCCCE-EEeCCCC-cccHHHHHHHHHHHhC
Q 017868          181 PETNVLIMGA-GPIGLVTMLGAPRAFGAPRIVIVDVDDYRLSV-AK---EIGADN-IVKVSTN-LQDIAEEVEKIQKAMG  253 (365)
Q Consensus       181 ~g~~vlI~G~-g~~G~~ai~~l~~~~g~~~vi~v~~~~~~~~~-~~---~~g~~~-~~~~~~~-~~~~~~~i~~~~~~~~  253 (365)
                      .+..++|.|+ +++|...+..+ ...|+ .++.++++++..+. .+   +.+... .+..+-. .+++.+.+.+..+. -
T Consensus        15 ~gk~~lVTGa~~GIG~aia~~l-~~~G~-~V~l~~r~~~~~~~~~~~l~~~~~~~~~~~~Dl~~~~~v~~~v~~~~~~-~   91 (169)
T PRK06720         15 AGKVAIVTGGGIGIGRNTALLL-AKQGA-KVIVTDIDQESGQATVEEITNLGGEALFVSYDMEKQGDWQRVISITLNA-F   91 (169)
T ss_pred             CCCEEEEecCCChHHHHHHHHH-HHCCC-EEEEEECCHHHHHHHHHHHHhcCCcEEEEEccCCCHHHHHHHHHHHHHH-c
Confidence            4678999987 88999999845 45688 57777776654422 22   234322 2232221 12333333333332 3


Q ss_pred             CCceEEEeCCCC
Q 017868          254 TGIDVSFDCAGL  265 (365)
Q Consensus       254 ~~~d~vid~~g~  265 (365)
                      +++|+++.++|.
T Consensus        92 G~iDilVnnAG~  103 (169)
T PRK06720         92 SRIDMLFQNAGL  103 (169)
T ss_pred             CCCCEEEECCCc
Confidence            578999988773

>PRK12550 shikimate 5-dehydrogenase; Reviewed

Probab=94.27  E-value=0.25  Score=43.67  Aligned_cols=74  Identities=16%  Similarity=0.180  Sum_probs=50.6

Q ss_pred             HHHhcCCCCCCEEEEEcCCHHHHHHHHHHHHHCCCCeEEEEeCChhHHHHH-HHcCCCEEEeCCCCcccHHHHHHHHHHH
Q 017868          173 ACRRANIGPETNVLIMGAGPIGLVTMLGAPRAFGAPRIVIVDVDDYRLSVA-KEIGADNIVKVSTNLQDIAEEVEKIQKA  251 (365)
Q Consensus       173 ~~~~~~~~~g~~vlI~G~g~~G~~ai~~l~~~~g~~~vi~v~~~~~~~~~~-~~~g~~~~~~~~~~~~~~~~~i~~~~~~  251 (365)
                      +++..+...+.+++|.|+|+.+.+++. .+...|+..+.++.++++|.+.+ +.++..           +...+.     
T Consensus       113 ~L~~~~~~~~~~vlilGaGGaarAi~~-aL~~~g~~~i~i~nR~~~~a~~la~~~~~~-----------~~~~~~-----  175 (272)
T PRK12550        113 LLASYQVPPDLVVALRGSGGMAKAVAA-ALRDAGFTDGTIVARNEKTGKALAELYGYE-----------WRPDLG-----  175 (272)
T ss_pred             HHHhcCCCCCCeEEEECCcHHHHHHHH-HHHHCCCCEEEEEeCCHHHHHHHHHHhCCc-----------chhhcc-----
Confidence            344434455678999999999999999 66678998888998988876644 445421           000110     


Q ss_pred             hCCCceEEEeCCC
Q 017868          252 MGTGIDVSFDCAG  264 (365)
Q Consensus       252 ~~~~~d~vid~~g  264 (365)
                       ...+|+||+|+.
T Consensus       176 -~~~~dlvINaTp  187 (272)
T PRK12550        176 -GIEADILVNVTP  187 (272)
T ss_pred             -cccCCEEEECCc
Confidence             245899999875

>PRK10538 malonic semialdehyde reductase; Provisional

Probab=94.27  E-value=0.51  Score=40.91  Aligned_cols=79  Identities=25%  Similarity=0.315  Sum_probs=47.2

Q ss_pred             EEEEEcC-CHHHHHHHHHHHHHCCCCeEEEEeCChhHHHHH-HHcCCCE-EEeCCC-CcccHHHHHHHHHHHhCCCceEE
Q 017868          184 NVLIMGA-GPIGLVTMLGAPRAFGAPRIVIVDVDDYRLSVA-KEIGADN-IVKVST-NLQDIAEEVEKIQKAMGTGIDVS  259 (365)
Q Consensus       184 ~vlI~G~-g~~G~~ai~~l~~~~g~~~vi~v~~~~~~~~~~-~~~g~~~-~~~~~~-~~~~~~~~i~~~~~~~~~~~d~v  259 (365)
                      +++|+|+ |++|.+++..+ ...|+ +|+++++++++.+.+ ..++... .+..+- +.+++.+.+.++.+. .+++|.+
T Consensus         2 ~vlItGasg~iG~~la~~l-~~~G~-~V~~~~r~~~~~~~~~~~~~~~~~~~~~Dl~~~~~i~~~~~~~~~~-~~~id~v   78 (248)
T PRK10538          2 IVLVTGATAGFGECITRRF-IQQGH-KVIATGRRQERLQELKDELGDNLYIAQLDVRNRAAIEEMLASLPAE-WRNIDVL   78 (248)
T ss_pred             EEEEECCCchHHHHHHHHH-HHCCC-EEEEEECCHHHHHHHHHHhccceEEEEecCCCHHHHHHHHHHHHHH-cCCCCEE
Confidence            6899987 99999999944 45698 577777877766544 3344321 111111 122333333333222 3579999


Q ss_pred             EeCCCC
Q 017868          260 FDCAGL  265 (365)
Q Consensus       260 id~~g~  265 (365)
                      +.++|.
T Consensus        79 i~~ag~   84 (248)
T PRK10538         79 VNNAGL   84 (248)
T ss_pred             EECCCc
Confidence            988763

>PRK08287 cobalt-precorrin-6Y C(15)-methyltransferase; Validated

Probab=94.26  E-value=1.1  Score=36.98  Aligned_cols=99  Identities=20%  Similarity=0.327  Sum_probs=60.6

Q ss_pred             HhcCCCCCCEEEEEcCCHHHHHHHHHHHHHCCCCeEEEEeCChhHHHHHH----HcCCCEEEeCCCCcccHHHHHHHHHH
Q 017868          175 RRANIGPETNVLIMGAGPIGLVTMLGAPRAFGAPRIVIVDVDDYRLSVAK----EIGADNIVKVSTNLQDIAEEVEKIQK  250 (365)
Q Consensus       175 ~~~~~~~g~~vlI~G~g~~G~~ai~~l~~~~g~~~vi~v~~~~~~~~~~~----~~g~~~~~~~~~~~~~~~~~i~~~~~  250 (365)
                      ....+.++++||=.|+|. |..++. +++......+++++.+++..+.++    .++...+.....   +....      
T Consensus        25 ~~l~~~~~~~vLDiG~G~-G~~~~~-la~~~~~~~v~~vD~s~~~~~~a~~n~~~~~~~~i~~~~~---d~~~~------   93 (187)
T PRK08287         25 SKLELHRAKHLIDVGAGT-GSVSIE-AALQFPSLQVTAIERNPDALRLIKENRQRFGCGNIDIIPG---EAPIE------   93 (187)
T ss_pred             HhcCCCCCCEEEEECCcC-CHHHHH-HHHHCCCCEEEEEECCHHHHHHHHHHHHHhCCCCeEEEec---Cchhh------
Confidence            445677888988888754 555555 555544347999999987765553    344432222111   11111      


Q ss_pred             HhCCCceEEEeCCC---CHHHHHHHHHhcccCCEEEEE
Q 017868          251 AMGTGIDVSFDCAG---LNKTMSTALGATCAGGKVCLV  285 (365)
Q Consensus       251 ~~~~~~d~vid~~g---~~~~~~~~~~~l~~~G~~~~~  285 (365)
                       ....+|+|+....   -...+..+.+.|+++|.++..
T Consensus        94 -~~~~~D~v~~~~~~~~~~~~l~~~~~~Lk~gG~lv~~  130 (187)
T PRK08287         94 -LPGKADAIFIGGSGGNLTAIIDWSLAHLHPGGRLVLT  130 (187)
T ss_pred             -cCcCCCEEEECCCccCHHHHHHHHHHhcCCCeEEEEE
Confidence             1357999986432   123556788899999998764

>CHL00194 ycf39 Ycf39; Provisional

Probab=94.26  E-value=0.31  Score=44.14  Aligned_cols=71  Identities=20%  Similarity=0.224  Sum_probs=44.2

Q ss_pred             EEEEEcC-CHHHHHHHHHHHHHCCCCeEEEEeCChhHHHHHHHcCCCEEEeCCCCcccHHHHHHHHHHHhCCCceEEEeC
Q 017868          184 NVLIMGA-GPIGLVTMLGAPRAFGAPRIVIVDVDDYRLSVAKEIGADNIVKVSTNLQDIAEEVEKIQKAMGTGIDVSFDC  262 (365)
Q Consensus       184 ~vlI~G~-g~~G~~ai~~l~~~~g~~~vi~v~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~i~~~~~~~~~~~d~vid~  262 (365)
                      +|||+|+ |-+|..++. .+...|. .|.++.++.++...+...++..+. .+-  .+. +.+.+..    .++|+||.+
T Consensus         2 kIlVtGatG~iG~~lv~-~Ll~~g~-~V~~l~R~~~~~~~l~~~~v~~v~-~Dl--~d~-~~l~~al----~g~d~Vi~~   71 (317)
T CHL00194          2 SLLVIGATGTLGRQIVR-QALDEGY-QVRCLVRNLRKASFLKEWGAELVY-GDL--SLP-ETLPPSF----KGVTAIIDA   71 (317)
T ss_pred             EEEEECCCcHHHHHHHH-HHHHCCC-eEEEEEcChHHhhhHhhcCCEEEE-CCC--CCH-HHHHHHH----CCCCEEEEC
Confidence            6999987 999999998 4445688 466666776665554555554322 111  121 2233322    468999998


Q ss_pred             CC
Q 017868          263 AG  264 (365)
Q Consensus       263 ~g  264 (365)
                      ++
T Consensus        72 ~~   73 (317)
T CHL00194         72 ST   73 (317)
T ss_pred             CC
Confidence            65

>PRK12548 shikimate 5-dehydrogenase; Provisional

Probab=94.22  E-value=0.36  Score=43.10  Aligned_cols=36  Identities=22%  Similarity=0.336  Sum_probs=29.7

Q ss_pred             CCCEEEEEcCCHHHHHHHHHHHHHCCCCeEEEEeCCh
Q 017868          181 PETNVLIMGAGPIGLVTMLGAPRAFGAPRIVIVDVDD  217 (365)
Q Consensus       181 ~g~~vlI~G~g~~G~~ai~~l~~~~g~~~vi~v~~~~  217 (365)
                      .+.++||+|+|++|.+++. .+...|++.|.++.++.
T Consensus       125 ~~k~vlI~GAGGagrAia~-~La~~G~~~V~I~~R~~  160 (289)
T PRK12548        125 KGKKLTVIGAGGAATAIQV-QCALDGAKEITIFNIKD  160 (289)
T ss_pred             CCCEEEEECCcHHHHHHHH-HHHHCCCCEEEEEeCCc
Confidence            5678999999999999888 55677998788887774

>PRK07067 sorbitol dehydrogenase; Provisional

Probab=94.21  E-value=0.53  Score=41.03  Aligned_cols=81  Identities=31%  Similarity=0.343  Sum_probs=48.8

Q ss_pred             CCCEEEEEcC-CHHHHHHHHHHHHHCCCCeEEEEeCChhHHHH-HHHcCCC-EEEeCCC-CcccHHHHHHHHHHHhCCCc
Q 017868          181 PETNVLIMGA-GPIGLVTMLGAPRAFGAPRIVIVDVDDYRLSV-AKEIGAD-NIVKVST-NLQDIAEEVEKIQKAMGTGI  256 (365)
Q Consensus       181 ~g~~vlI~G~-g~~G~~ai~~l~~~~g~~~vi~v~~~~~~~~~-~~~~g~~-~~~~~~~-~~~~~~~~i~~~~~~~~~~~  256 (365)
                      .+.++||+|+ |++|..++..++ ..|+ .|+.++++.++.+. .++++.. ..+..+- +..+....++.+.+. .+++
T Consensus         5 ~~~~vlItGas~~iG~~ia~~l~-~~G~-~v~~~~r~~~~~~~~~~~~~~~~~~~~~D~~~~~~~~~~~~~~~~~-~~~i   81 (257)
T PRK07067          5 QGKVALLTGAASGIGEAVAERYL-AEGA-RVVIADIKPARARLAALEIGPAAIAVSLDVTRQDSIDRIVAAAVER-FGGI   81 (257)
T ss_pred             CCCEEEEeCCCchHHHHHHHHHH-HcCC-EEEEEcCCHHHHHHHHHHhCCceEEEEccCCCHHHHHHHHHHHHHH-cCCC
Confidence            3578999987 999999999554 5598 57777777766543 3444422 1122221 223333334333332 3579


Q ss_pred             eEEEeCCC
Q 017868          257 DVSFDCAG  264 (365)
Q Consensus       257 d~vid~~g  264 (365)
                      |+++.+.|
T Consensus        82 d~li~~ag   89 (257)
T PRK07067         82 DILFNNAA   89 (257)
T ss_pred             CEEEECCC
Confidence            99999876

>KOG0725 consensus Reductases with broad range of substrate specificities [General function prediction only]

Probab=94.20  E-value=0.36  Score=42.60  Aligned_cols=83  Identities=25%  Similarity=0.270  Sum_probs=49.0

Q ss_pred             CCCCEEEEEcC-CHHHHHHHHHHHHHCCCCeEEEEeCChhHHHH-HHH---cCCC----EEEeCCCC-cccHHHHHHHHH
Q 017868          180 GPETNVLIMGA-GPIGLVTMLGAPRAFGAPRIVIVDVDDYRLSV-AKE---IGAD----NIVKVSTN-LQDIAEEVEKIQ  249 (365)
Q Consensus       180 ~~g~~vlI~G~-g~~G~~ai~~l~~~~g~~~vi~v~~~~~~~~~-~~~---~g~~----~~~~~~~~-~~~~~~~i~~~~  249 (365)
                      -.|..+||+|+ .++|.+++..+ ...|+ +|+.+.+++++.+. +++   .+..    ..+..+-. .++..+.+....
T Consensus         6 l~gkvalVTG~s~GIG~aia~~l-a~~Ga-~v~i~~r~~~~~~~~~~~~~~~~~~~~~~~~~~~Dv~~~~~~~~l~~~~~   83 (270)
T KOG0725|consen    6 LAGKVALVTGGSSGIGKAIALLL-AKAGA-KVVITGRSEERLEETAQELGGLGYTGGKVLAIVCDVSKEVDVEKLVEFAV   83 (270)
T ss_pred             CCCcEEEEECCCChHHHHHHHHH-HHCCC-EEEEEeCCHHHHHHHHHHHHhcCCCCCeeEEEECcCCCHHHHHHHHHHHH
Confidence            36778899987 89999998845 46699 56666677766433 222   2221    12222222 233333333333


Q ss_pred             HHhCCCceEEEeCCC
Q 017868          250 KAMGTGIDVSFDCAG  264 (365)
Q Consensus       250 ~~~~~~~d~vid~~g  264 (365)
                      +...+++|+.++..|
T Consensus        84 ~~~~GkidiLvnnag   98 (270)
T KOG0725|consen   84 EKFFGKIDILVNNAG   98 (270)
T ss_pred             HHhCCCCCEEEEcCC
Confidence            322578999999877

>PRK06484 short chain dehydrogenase; Validated

Probab=94.18  E-value=0.52  Score=45.92  Aligned_cols=83  Identities=23%  Similarity=0.289  Sum_probs=51.9

Q ss_pred             CCCCEEEEEcC-CHHHHHHHHHHHHHCCCCeEEEEeCChhHHHHH-HHcCCCE-EEeCCC-CcccHHHHHHHHHHHhCCC
Q 017868          180 GPETNVLIMGA-GPIGLVTMLGAPRAFGAPRIVIVDVDDYRLSVA-KEIGADN-IVKVST-NLQDIAEEVEKIQKAMGTG  255 (365)
Q Consensus       180 ~~g~~vlI~G~-g~~G~~ai~~l~~~~g~~~vi~v~~~~~~~~~~-~~~g~~~-~~~~~~-~~~~~~~~i~~~~~~~~~~  255 (365)
                      ..+.++||+|+ +++|.++++.++ ..|+ +|+.+++++++.+.+ ++++... .+..+- +.++....+.+..+. -+.
T Consensus       267 ~~~k~~lItGas~gIG~~~a~~l~-~~G~-~V~~~~r~~~~~~~~~~~~~~~~~~~~~D~~~~~~~~~~~~~~~~~-~g~  343 (520)
T PRK06484        267 ESPRVVAITGGARGIGRAVADRFA-AAGD-RLLIIDRDAEGAKKLAEALGDEHLSVQADITDEAAVESAFAQIQAR-WGR  343 (520)
T ss_pred             cCCCEEEEECCCcHHHHHHHHHHH-HCCC-EEEEEeCCHHHHHHHHHHhCCceeEEEccCCCHHHHHHHHHHHHHH-cCC
Confidence            35788999987 999999999554 5698 577777777766544 4455432 122222 223333444443332 357


Q ss_pred             ceEEEeCCCC
Q 017868          256 IDVSFDCAGL  265 (365)
Q Consensus       256 ~d~vid~~g~  265 (365)
                      +|++|.++|.
T Consensus       344 id~li~nAg~  353 (520)
T PRK06484        344 LDVLVNNAGI  353 (520)
T ss_pred             CCEEEECCCC
Confidence            9999998873

>PRK06523 short chain dehydrogenase; Provisional

Probab=94.17  E-value=0.44  Score=41.56  Aligned_cols=76  Identities=18%  Similarity=0.210  Sum_probs=44.5

Q ss_pred             CCCEEEEEcC-CHHHHHHHHHHHHHCCCCeEEEEeCChhHHHHHHHcCC-CEEEeCCCCc-ccHHHHHHHHHHHhCCCce
Q 017868          181 PETNVLIMGA-GPIGLVTMLGAPRAFGAPRIVIVDVDDYRLSVAKEIGA-DNIVKVSTNL-QDIAEEVEKIQKAMGTGID  257 (365)
Q Consensus       181 ~g~~vlI~G~-g~~G~~ai~~l~~~~g~~~vi~v~~~~~~~~~~~~~g~-~~~~~~~~~~-~~~~~~i~~~~~~~~~~~d  257 (365)
                      +|.++||+|+ |++|..+++.++ ..|+ +|+.+.++.+..     .+. ...+..+-.+ ++....+.++.+. .+++|
T Consensus         8 ~~k~vlItGas~gIG~~ia~~l~-~~G~-~v~~~~r~~~~~-----~~~~~~~~~~D~~~~~~~~~~~~~~~~~-~~~id   79 (260)
T PRK06523          8 AGKRALVTGGTKGIGAATVARLL-EAGA-RVVTTARSRPDD-----LPEGVEFVAADLTTAEGCAAVARAVLER-LGGVD   79 (260)
T ss_pred             CCCEEEEECCCCchhHHHHHHHH-HCCC-EEEEEeCChhhh-----cCCceeEEecCCCCHHHHHHHHHHHHHH-cCCCC
Confidence            4789999987 999999999454 5699 567776654431     111 1112222222 2233333333322 35799


Q ss_pred             EEEeCCC
Q 017868          258 VSFDCAG  264 (365)
Q Consensus       258 ~vid~~g  264 (365)
                      ++|.++|
T Consensus        80 ~vi~~ag   86 (260)
T PRK06523         80 ILVHVLG   86 (260)
T ss_pred             EEEECCc
Confidence            9999887

>PRK08085 gluconate 5-dehydrogenase; Provisional

Probab=94.15  E-value=0.52  Score=40.98  Aligned_cols=82  Identities=28%  Similarity=0.473  Sum_probs=47.9

Q ss_pred             CCCEEEEEcC-CHHHHHHHHHHHHHCCCCeEEEEeCChhHHH-HHHHc---CCCE-EEeCCCC-cccHHHHHHHHHHHhC
Q 017868          181 PETNVLIMGA-GPIGLVTMLGAPRAFGAPRIVIVDVDDYRLS-VAKEI---GADN-IVKVSTN-LQDIAEEVEKIQKAMG  253 (365)
Q Consensus       181 ~g~~vlI~G~-g~~G~~ai~~l~~~~g~~~vi~v~~~~~~~~-~~~~~---g~~~-~~~~~~~-~~~~~~~i~~~~~~~~  253 (365)
                      .+.++||+|+ +++|.++++.++ ..|+ .++.+++++++.+ ...++   +... .+..+-. ..++.+.+..+.+. .
T Consensus         8 ~~k~~lItGas~giG~~ia~~L~-~~G~-~vvl~~r~~~~~~~~~~~l~~~~~~~~~~~~Dl~~~~~~~~~~~~~~~~-~   84 (254)
T PRK08085          8 AGKNILITGSAQGIGFLLATGLA-EYGA-EIIINDITAERAELAVAKLRQEGIKAHAAPFNVTHKQEVEAAIEHIEKD-I   84 (254)
T ss_pred             CCCEEEEECCCChHHHHHHHHHH-HcCC-EEEEEcCCHHHHHHHHHHHHhcCCeEEEEecCCCCHHHHHHHHHHHHHh-c
Confidence            4678999987 999999999555 5598 5677777765543 22222   3221 2222222 22333333333222 3


Q ss_pred             CCceEEEeCCCC
Q 017868          254 TGIDVSFDCAGL  265 (365)
Q Consensus       254 ~~~d~vid~~g~  265 (365)
                      +++|+++.+.|.
T Consensus        85 ~~id~vi~~ag~   96 (254)
T PRK08085         85 GPIDVLINNAGI   96 (254)
T ss_pred             CCCCEEEECCCc
Confidence            579999998873

>TIGR02632 RhaD_aldol-ADH rhamnulose-1-phosphate aldolase/alcohol dehydrogenase

Probab=94.13  E-value=0.62  Score=47.00  Aligned_cols=117  Identities=22%  Similarity=0.332  Sum_probs=63.4

Q ss_pred             ceeeEEeecCCceEECCCCCCcchhccchhhHHHHHHHHhcCCCCCCEEEEEcC-CHHHHHHHHHHHHHCCCCeEEEEeC
Q 017868          137 SLANQVVHPADLCFKLPDNVSLEEGAMCEPLSVGLHACRRANIGPETNVLIMGA-GPIGLVTMLGAPRAFGAPRIVIVDV  215 (365)
Q Consensus       137 ~~~~~~~v~~~~~~~iP~~~~~~~a~~~~~~~~a~~~~~~~~~~~g~~vlI~G~-g~~G~~ai~~l~~~~g~~~vi~v~~  215 (365)
                      +..+|+.+++...+.+ +..+.+++-+-..        -....-.+.++||+|+ |++|.++++.++ ..|+ .|+.+++
T Consensus       378 ~~~~~~~~~~~~~f~~-eyw~~e~~kl~~~--------~~~~~l~gkvvLVTGasggIG~aiA~~La-~~Ga-~Vvi~~r  446 (676)
T TIGR02632       378 AVSEYVSLPEQEAFDI-EYWPLEEAKLRRM--------PKEKTLARRVAFVTGGAGGIGRETARRLA-AEGA-HVVLADL  446 (676)
T ss_pred             cccceecCchhhccch-hhhhhhHHhhccC--------CCCcCCCCCEEEEeCCCcHHHHHHHHHHH-hCCC-EEEEEeC
Confidence            3455666666666665 4444444322100        0001124788999987 999999999554 5698 5777777


Q ss_pred             ChhHHHHH-HH----cCCCE--EEeCCC-CcccHHHHHHHHHHHhCCCceEEEeCCCC
Q 017868          216 DDYRLSVA-KE----IGADN--IVKVST-NLQDIAEEVEKIQKAMGTGIDVSFDCAGL  265 (365)
Q Consensus       216 ~~~~~~~~-~~----~g~~~--~~~~~~-~~~~~~~~i~~~~~~~~~~~d~vid~~g~  265 (365)
                      +.++.+.+ ++    .+...  .+..+- +..++.+.+.+..+. -+++|++|.++|.
T Consensus       447 ~~~~~~~~~~~l~~~~~~~~~~~v~~Dvtd~~~v~~a~~~i~~~-~g~iDilV~nAG~  503 (676)
T TIGR02632       447 NLEAAEAVAAEINGQFGAGRAVALKMDVTDEQAVKAAFADVALA-YGGVDIVVNNAGI  503 (676)
T ss_pred             CHHHHHHHHHHHHhhcCCCcEEEEECCCCCHHHHHHHHHHHHHh-cCCCcEEEECCCC
Confidence            76654432 22    23211  222221 222333333333322 3579999998883

>PRK11207 tellurite resistance protein TehB; Provisional

Probab=94.11  E-value=1  Score=37.72  Aligned_cols=98  Identities=14%  Similarity=0.184  Sum_probs=59.3

Q ss_pred             HhcCCCCCCEEEEEcCCHHHHHHHHHHHHHCCCCeEEEEeCChhHHHHHHH----cCCCEEEeCCCCcccHHHHHHHHHH
Q 017868          175 RRANIGPETNVLIMGAGPIGLVTMLGAPRAFGAPRIVIVDVDDYRLSVAKE----IGADNIVKVSTNLQDIAEEVEKIQK  250 (365)
Q Consensus       175 ~~~~~~~g~~vlI~G~g~~G~~ai~~l~~~~g~~~vi~v~~~~~~~~~~~~----~g~~~~~~~~~~~~~~~~~i~~~~~  250 (365)
                      +.....++.+||-.|+|. |..+.. +++. |. .|++++.+++-.+.+++    .+...+....   .++.    +.. 
T Consensus        24 ~~l~~~~~~~vLDiGcG~-G~~a~~-La~~-g~-~V~gvD~S~~~i~~a~~~~~~~~~~~v~~~~---~d~~----~~~-   91 (197)
T PRK11207         24 EAVKVVKPGKTLDLGCGN-GRNSLY-LAAN-GF-DVTAWDKNPMSIANLERIKAAENLDNLHTAV---VDLN----NLT-   91 (197)
T ss_pred             HhcccCCCCcEEEECCCC-CHHHHH-HHHC-CC-EEEEEeCCHHHHHHHHHHHHHcCCCcceEEe---cChh----hCC-
Confidence            334456778999998865 667777 6654 77 79999999876655443    2332111100   1111    110 


Q ss_pred             HhCCCceEEEeCCC----C----HHHHHHHHHhcccCCEEEEE
Q 017868          251 AMGTGIDVSFDCAG----L----NKTMSTALGATCAGGKVCLV  285 (365)
Q Consensus       251 ~~~~~~d~vid~~g----~----~~~~~~~~~~l~~~G~~~~~  285 (365)
                       ....+|+|+....    .    ...+....++|+++|.++.+
T Consensus        92 -~~~~fD~I~~~~~~~~~~~~~~~~~l~~i~~~LkpgG~~~~~  133 (197)
T PRK11207         92 -FDGEYDFILSTVVLMFLEAKTIPGLIANMQRCTKPGGYNLIV  133 (197)
T ss_pred             -cCCCcCEEEEecchhhCCHHHHHHHHHHHHHHcCCCcEEEEE
Confidence             1356999987532    1    23556788899999996554

>PRK09134 short chain dehydrogenase; Provisional

Probab=94.11  E-value=0.74  Score=40.15  Aligned_cols=82  Identities=20%  Similarity=0.191  Sum_probs=45.0

Q ss_pred             CCCEEEEEcC-CHHHHHHHHHHHHHCCCCeEEEEeCChhHHH-HHHH---cCCCE-EEeCCCC-cccHHHHHHHHHHHhC
Q 017868          181 PETNVLIMGA-GPIGLVTMLGAPRAFGAPRIVIVDVDDYRLS-VAKE---IGADN-IVKVSTN-LQDIAEEVEKIQKAMG  253 (365)
Q Consensus       181 ~g~~vlI~G~-g~~G~~ai~~l~~~~g~~~vi~v~~~~~~~~-~~~~---~g~~~-~~~~~~~-~~~~~~~i~~~~~~~~  253 (365)
                      .+.++||+|+ |.+|..+++.+ ...|+++++...++.++.+ ..++   .+... .+..+-. ..+....+.+..+. -
T Consensus         8 ~~k~vlItGas~giG~~la~~l-~~~g~~v~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~Dl~d~~~~~~~~~~~~~~-~   85 (258)
T PRK09134          8 APRAALVTGAARRIGRAIALDL-AAHGFDVAVHYNRSRDEAEALAAEIRALGRRAVALQADLADEAEVRALVARASAA-L   85 (258)
T ss_pred             CCCEEEEeCCCcHHHHHHHHHH-HHCCCEEEEEeCCCHHHHHHHHHHHHhcCCeEEEEEcCCCCHHHHHHHHHHHHHH-c
Confidence            4678999987 99999999845 5668855444444444332 2222   23321 2222221 22222233333222 3


Q ss_pred             CCceEEEeCCC
Q 017868          254 TGIDVSFDCAG  264 (365)
Q Consensus       254 ~~~d~vid~~g  264 (365)
                      +++|++|.+.|
T Consensus        86 ~~iD~vi~~ag   96 (258)
T PRK09134         86 GPITLLVNNAS   96 (258)
T ss_pred             CCCCEEEECCc
Confidence            57999999987

>PRK08263 short chain dehydrogenase; Provisional

Probab=94.11  E-value=0.79  Score=40.46  Aligned_cols=81  Identities=21%  Similarity=0.198  Sum_probs=47.8

Q ss_pred             CCEEEEEcC-CHHHHHHHHHHHHHCCCCeEEEEeCChhHHHHH-HHcCCC-EEEeCCC-CcccHHHHHHHHHHHhCCCce
Q 017868          182 ETNVLIMGA-GPIGLVTMLGAPRAFGAPRIVIVDVDDYRLSVA-KEIGAD-NIVKVST-NLQDIAEEVEKIQKAMGTGID  257 (365)
Q Consensus       182 g~~vlI~G~-g~~G~~ai~~l~~~~g~~~vi~v~~~~~~~~~~-~~~g~~-~~~~~~~-~~~~~~~~i~~~~~~~~~~~d  257 (365)
                      +.++||+|+ |.+|..+++.+ ...|+ .|+.++++.++.+.+ +.++.. ..+..+- +.+++...+..+.+. -+++|
T Consensus         3 ~k~vlItGasg~iG~~~a~~l-~~~g~-~V~~~~r~~~~~~~~~~~~~~~~~~~~~D~~~~~~~~~~~~~~~~~-~~~~d   79 (275)
T PRK08263          3 EKVWFITGASRGFGRAWTEAA-LERGD-RVVATARDTATLADLAEKYGDRLLPLALDVTDRAAVFAAVETAVEH-FGRLD   79 (275)
T ss_pred             CCEEEEeCCCChHHHHHHHHH-HHCCC-EEEEEECCHHHHHHHHHhccCCeeEEEccCCCHHHHHHHHHHHHHH-cCCCC
Confidence            468999987 99999999945 45588 577777777665443 333321 1122211 222333333333322 35789


Q ss_pred             EEEeCCCC
Q 017868          258 VSFDCAGL  265 (365)
Q Consensus       258 ~vid~~g~  265 (365)
                      .+|.++|.
T Consensus        80 ~vi~~ag~   87 (275)
T PRK08263         80 IVVNNAGY   87 (275)
T ss_pred             EEEECCCC
Confidence            99999874

>PRK07985 oxidoreductase; Provisional

Probab=94.08  E-value=1.5  Score=39.19  Aligned_cols=81  Identities=20%  Similarity=0.251  Sum_probs=44.9

Q ss_pred             CCCEEEEEcC-CHHHHHHHHHHHHHCCCCeEEEEeCC--hhHHH----HHHHcCCCE-EEeCCC-CcccHHHHHHHHHHH
Q 017868          181 PETNVLIMGA-GPIGLVTMLGAPRAFGAPRIVIVDVD--DYRLS----VAKEIGADN-IVKVST-NLQDIAEEVEKIQKA  251 (365)
Q Consensus       181 ~g~~vlI~G~-g~~G~~ai~~l~~~~g~~~vi~v~~~--~~~~~----~~~~~g~~~-~~~~~~-~~~~~~~~i~~~~~~  251 (365)
                      ++.++||+|+ +++|.++++.++ ..|++ |+.+.++  .++.+    ..++.+... .+..+- +.++....+.+..+.
T Consensus        48 ~~k~vlITGas~gIG~aia~~L~-~~G~~-Vi~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~Dl~~~~~~~~~~~~~~~~  125 (294)
T PRK07985         48 KDRKALVTGGDSGIGRAAAIAYA-REGAD-VAISYLPVEEEDAQDVKKIIEECGRKAVLLPGDLSDEKFARSLVHEAHKA  125 (294)
T ss_pred             CCCEEEEECCCCcHHHHHHHHHH-HCCCE-EEEecCCcchhhHHHHHHHHHHcCCeEEEEEccCCCHHHHHHHHHHHHHH
Confidence            5678999987 999999999555 56995 5555432  22222    223334321 222222 222333333433332


Q ss_pred             hCCCceEEEeCCC
Q 017868          252 MGTGIDVSFDCAG  264 (365)
Q Consensus       252 ~~~~~d~vid~~g  264 (365)
                       -+++|+++.+.|
T Consensus       126 -~g~id~lv~~Ag  137 (294)
T PRK07985        126 -LGGLDIMALVAG  137 (294)
T ss_pred             -hCCCCEEEECCC
Confidence             357899998876

>PRK06124 gluconate 5-dehydrogenase; Provisional

Probab=94.07  E-value=0.87  Score=39.60  Aligned_cols=82  Identities=13%  Similarity=0.266  Sum_probs=48.8

Q ss_pred             CCCEEEEEcC-CHHHHHHHHHHHHHCCCCeEEEEeCChhHHHH-H---HHcCCC-EEEeCCC-CcccHHHHHHHHHHHhC
Q 017868          181 PETNVLIMGA-GPIGLVTMLGAPRAFGAPRIVIVDVDDYRLSV-A---KEIGAD-NIVKVST-NLQDIAEEVEKIQKAMG  253 (365)
Q Consensus       181 ~g~~vlI~G~-g~~G~~ai~~l~~~~g~~~vi~v~~~~~~~~~-~---~~~g~~-~~~~~~~-~~~~~~~~i~~~~~~~~  253 (365)
                      ++.++||+|+ +.+|..++..++ ..|+ .++.+++++++.+. .   ++.+.. ..+..+- +..++...+++.... -
T Consensus        10 ~~k~ilItGas~~IG~~la~~l~-~~G~-~v~~~~r~~~~~~~~~~~~~~~~~~~~~~~~Dl~~~~~~~~~~~~~~~~-~   86 (256)
T PRK06124         10 AGQVALVTGSARGLGFEIARALA-GAGA-HVLVNGRNAATLEAAVAALRAAGGAAEALAFDIADEEAVAAAFARIDAE-H   86 (256)
T ss_pred             CCCEEEEECCCchHHHHHHHHHH-HcCC-eEEEEeCCHHHHHHHHHHHHhcCCceEEEEccCCCHHHHHHHHHHHHHh-c
Confidence            5789999987 999999999554 5698 57777777655332 2   233421 1222221 223333334433332 2


Q ss_pred             CCceEEEeCCCC
Q 017868          254 TGIDVSFDCAGL  265 (365)
Q Consensus       254 ~~~d~vid~~g~  265 (365)
                      +++|.+|.+.|.
T Consensus        87 ~~id~vi~~ag~   98 (256)
T PRK06124         87 GRLDILVNNVGA   98 (256)
T ss_pred             CCCCEEEECCCC
Confidence            478999998873

>PRK12826 3-ketoacyl-(acyl-carrier-protein) reductase; Reviewed

Probab=94.07  E-value=0.72  Score=39.81  Aligned_cols=82  Identities=20%  Similarity=0.239  Sum_probs=46.3

Q ss_pred             CCCEEEEEcC-CHHHHHHHHHHHHHCCCCeEEEEeCChhHHHH----HHHcCCCE-EEeCCC-CcccHHHHHHHHHHHhC
Q 017868          181 PETNVLIMGA-GPIGLVTMLGAPRAFGAPRIVIVDVDDYRLSV----AKEIGADN-IVKVST-NLQDIAEEVEKIQKAMG  253 (365)
Q Consensus       181 ~g~~vlI~G~-g~~G~~ai~~l~~~~g~~~vi~v~~~~~~~~~----~~~~g~~~-~~~~~~-~~~~~~~~i~~~~~~~~  253 (365)
                      .+.++||+|+ |.+|..++..+ ...|+ .|+++.++.++...    ++..+... .+..+- +..++.+.+.+..+. .
T Consensus         5 ~~~~ilItGasg~iG~~l~~~l-~~~g~-~V~~~~r~~~~~~~~~~~l~~~~~~~~~~~~Dl~~~~~~~~~~~~~~~~-~   81 (251)
T PRK12826          5 EGRVALVTGAARGIGRAIAVRL-AADGA-EVIVVDICGDDAAATAELVEAAGGKARARQVDVRDRAALKAAVAAGVED-F   81 (251)
T ss_pred             CCCEEEEcCCCCcHHHHHHHHH-HHCCC-EEEEEeCCHHHHHHHHHHHHhcCCeEEEEECCCCCHHHHHHHHHHHHHH-h
Confidence            4578999987 99999999845 45588 57777777544322    22223221 222222 122333333333221 2


Q ss_pred             CCceEEEeCCCC
Q 017868          254 TGIDVSFDCAGL  265 (365)
Q Consensus       254 ~~~d~vid~~g~  265 (365)
                      .++|++|.+.|.
T Consensus        82 ~~~d~vi~~ag~   93 (251)
T PRK12826         82 GRLDILVANAGI   93 (251)
T ss_pred             CCCCEEEECCCC
Confidence            479999998763

>PRK06113 7-alpha-hydroxysteroid dehydrogenase; Validated

Probab=94.03  E-value=0.76  Score=39.99  Aligned_cols=81  Identities=17%  Similarity=0.269  Sum_probs=47.1

Q ss_pred             CCCEEEEEcC-CHHHHHHHHHHHHHCCCCeEEEEeCChhHHHHH----HHcCCCE-EEeCCC-CcccHHHHHHHHHHHhC
Q 017868          181 PETNVLIMGA-GPIGLVTMLGAPRAFGAPRIVIVDVDDYRLSVA----KEIGADN-IVKVST-NLQDIAEEVEKIQKAMG  253 (365)
Q Consensus       181 ~g~~vlI~G~-g~~G~~ai~~l~~~~g~~~vi~v~~~~~~~~~~----~~~g~~~-~~~~~~-~~~~~~~~i~~~~~~~~  253 (365)
                      .+.++||+|+ +++|..++..++ ..|++ ++.++++.++.+.+    ++.+... .+..+- +.++..+.++.+.+. -
T Consensus        10 ~~k~vlVtG~s~gIG~~la~~l~-~~G~~-vv~~~r~~~~~~~~~~~l~~~~~~~~~~~~D~~~~~~i~~~~~~~~~~-~   86 (255)
T PRK06113         10 DGKCAIITGAGAGIGKEIAITFA-TAGAS-VVVSDINADAANHVVDEIQQLGGQAFACRCDITSEQELSALADFALSK-L   86 (255)
T ss_pred             CCCEEEEECCCchHHHHHHHHHH-HCCCe-EEEEeCCHHHHHHHHHHHHhcCCcEEEEEccCCCHHHHHHHHHHHHHH-c
Confidence            4689999987 999999999554 56985 56666666554322    2223221 222221 122333333333332 3


Q ss_pred             CCceEEEeCCC
Q 017868          254 TGIDVSFDCAG  264 (365)
Q Consensus       254 ~~~d~vid~~g  264 (365)
                      +++|+++.+.|
T Consensus        87 ~~~d~li~~ag   97 (255)
T PRK06113         87 GKVDILVNNAG   97 (255)
T ss_pred             CCCCEEEECCC
Confidence            57899999887

>PRK09291 short chain dehydrogenase; Provisional

Probab=94.00  E-value=0.34  Score=42.17  Aligned_cols=75  Identities=19%  Similarity=0.204  Sum_probs=43.9

Q ss_pred             CCEEEEEcC-CHHHHHHHHHHHHHCCCCeEEEEeCChhHHHHH----HHcCCC-EEEeCCCCcccHHHHHHHHHHHhCCC
Q 017868          182 ETNVLIMGA-GPIGLVTMLGAPRAFGAPRIVIVDVDDYRLSVA----KEIGAD-NIVKVSTNLQDIAEEVEKIQKAMGTG  255 (365)
Q Consensus       182 g~~vlI~G~-g~~G~~ai~~l~~~~g~~~vi~v~~~~~~~~~~----~~~g~~-~~~~~~~~~~~~~~~i~~~~~~~~~~  255 (365)
                      +.++||+|+ |.+|..+++ .+...|+ .++++.+++++.+.+    +..+.. .++..+-  .+. ..++..   ...+
T Consensus         2 ~~~vlVtGasg~iG~~ia~-~l~~~G~-~v~~~~r~~~~~~~~~~~~~~~~~~~~~~~~D~--~~~-~~~~~~---~~~~   73 (257)
T PRK09291          2 SKTILITGAGSGFGREVAL-RLARKGH-NVIAGVQIAPQVTALRAEAARRGLALRVEKLDL--TDA-IDRAQA---AEWD   73 (257)
T ss_pred             CCEEEEeCCCCHHHHHHHH-HHHHCCC-EEEEEeCCHHHHHHHHHHHHhcCCcceEEEeeC--CCH-HHHHHH---hcCC
Confidence            357999987 999999999 4456698 466666666544332    223322 1121111  222 223322   1358


Q ss_pred             ceEEEeCCC
Q 017868          256 IDVSFDCAG  264 (365)
Q Consensus       256 ~d~vid~~g  264 (365)
                      +|++|.+.|
T Consensus        74 id~vi~~ag   82 (257)
T PRK09291         74 VDVLLNNAG   82 (257)
T ss_pred             CCEEEECCC
Confidence            999999887

>COG0673 MviM Predicted dehydrogenases and related proteins [General function prediction only]

Probab=93.99  E-value=1.9  Score=39.36  Aligned_cols=128  Identities=27%  Similarity=0.301  Sum_probs=77.4

Q ss_pred             EEEEEcCCHHH-HHHHHHHHHHCC--CCeEEEEeCChhHH-HHHHHcCCCEEEeCCCCcccHHHHHHHHHHHhCCCceEE
Q 017868          184 NVLIMGAGPIG-LVTMLGAPRAFG--APRIVIVDVDDYRL-SVAKEIGADNIVKVSTNLQDIAEEVEKIQKAMGTGIDVS  259 (365)
Q Consensus       184 ~vlI~G~g~~G-~~ai~~l~~~~g--~~~vi~v~~~~~~~-~~~~~~g~~~~~~~~~~~~~~~~~i~~~~~~~~~~~d~v  259 (365)
                      +|.|+|+|.++ ...+. ..+..+  +..+.++++++++. +++++++....  |    .++.+.+.      ...+|+|
T Consensus         5 rvgiiG~G~~~~~~~~~-~~~~~~~~~~~vav~d~~~~~a~~~a~~~~~~~~--~----~~~~~ll~------~~~iD~V   71 (342)
T COG0673           5 RVGIIGAGGIAGKAHLP-ALAALGGGLELVAVVDRDPERAEAFAEEFGIAKA--Y----TDLEELLA------DPDIDAV   71 (342)
T ss_pred             EEEEEcccHHHHHHhHH-HHHhCCCceEEEEEecCCHHHHHHHHHHcCCCcc--c----CCHHHHhc------CCCCCEE
Confidence            67889987555 44555 334434  45666668888875 46788997622  2    24444332      3459999


Q ss_pred             EeCCCCHHHHHHHHHhcccCCEEEEEccCCCCccccchH------hh-hcCcEEEe--ecccCCcHHHHHHHHHcCCC
Q 017868          260 FDCAGLNKTMSTALGATCAGGKVCLVGMGHHEMTVPLTP------AA-VREVDVVG--VFRYKNTWPLCLELLRSGKI  328 (365)
Q Consensus       260 id~~g~~~~~~~~~~~l~~~G~~~~~g~~~~~~~~~~~~------~~-~~~~~i~~--~~~~~~~~~~~~~~l~~g~~  328 (365)
                      +-++....+.+.+..+|..|= -+++.   .+.......      +. .+++.+.-  ...+...++.+-+++++|.+
T Consensus        72 ~Iatp~~~H~e~~~~AL~aGk-hVl~E---KPla~t~~ea~~l~~~a~~~~~~l~v~~~~Rf~p~~~~~k~li~~g~l  145 (342)
T COG0673          72 YIATPNALHAELALAALEAGK-HVLCE---KPLALTLEEAEELVELARKAGVKLMVGFNRRFDPAVQALKELIDSGAL  145 (342)
T ss_pred             EEcCCChhhHHHHHHHHhcCC-EEEEc---CCCCCCHHHHHHHHHHHHHcCCceeeehhhhcCHHHHHHHHHHhcCCc
Confidence            999998888888988888554 45552   222222221      11 12222222  22336678888999999877

>PRK12367 short chain dehydrogenase; Provisional

Probab=93.99  E-value=0.44  Score=41.41  Aligned_cols=75  Identities=21%  Similarity=0.244  Sum_probs=42.8

Q ss_pred             CCCEEEEEcC-CHHHHHHHHHHHHHCCCCeEEEEeCCh-hHHHHHHHcCCCEEEeCCCCcccHHHHHHHHHHHhCCCceE
Q 017868          181 PETNVLIMGA-GPIGLVTMLGAPRAFGAPRIVIVDVDD-YRLSVAKEIGADNIVKVSTNLQDIAEEVEKIQKAMGTGIDV  258 (365)
Q Consensus       181 ~g~~vlI~G~-g~~G~~ai~~l~~~~g~~~vi~v~~~~-~~~~~~~~~g~~~~~~~~~~~~~~~~~i~~~~~~~~~~~d~  258 (365)
                      .+.++||+|+ |++|.++++ .....|+ .|+.+++++ +..+.... +....+..+-  .+.. .+.+.    -+.+|+
T Consensus        13 ~~k~~lITGas~gIG~ala~-~l~~~G~-~Vi~~~r~~~~~~~~~~~-~~~~~~~~D~--~~~~-~~~~~----~~~iDi   82 (245)
T PRK12367         13 QGKRIGITGASGALGKALTK-AFRAKGA-KVIGLTHSKINNSESNDE-SPNEWIKWEC--GKEE-SLDKQ----LASLDV   82 (245)
T ss_pred             CCCEEEEEcCCcHHHHHHHH-HHHHCCC-EEEEEECCchhhhhhhcc-CCCeEEEeeC--CCHH-HHHHh----cCCCCE
Confidence            3579999987 999999999 4456698 566666654 22222111 1112222222  1221 22222    246999


Q ss_pred             EEeCCCC
Q 017868          259 SFDCAGL  265 (365)
Q Consensus       259 vid~~g~  265 (365)
                      +|.++|.
T Consensus        83 lVnnAG~   89 (245)
T PRK12367         83 LILNHGI   89 (245)
T ss_pred             EEECCcc
Confidence            9999874

>PRK06997 enoyl-(acyl carrier protein) reductase; Provisional

Probab=93.98  E-value=0.67  Score=40.61  Aligned_cols=82  Identities=20%  Similarity=0.262  Sum_probs=46.7

Q ss_pred             CCCEEEEEcC---CHHHHHHHHHHHHHCCCCeEEEEeCC---hhHHH-HHHHcCCCEEEeCCC-CcccHHHHHHHHHHHh
Q 017868          181 PETNVLIMGA---GPIGLVTMLGAPRAFGAPRIVIVDVD---DYRLS-VAKEIGADNIVKVST-NLQDIAEEVEKIQKAM  252 (365)
Q Consensus       181 ~g~~vlI~G~---g~~G~~ai~~l~~~~g~~~vi~v~~~---~~~~~-~~~~~g~~~~~~~~~-~~~~~~~~i~~~~~~~  252 (365)
                      .+.++||+|+   +++|.++++.++ ..|++ |+.+.+.   +++.+ +.++++....+..+- +.++..+.+....+. 
T Consensus         5 ~~k~vlItGas~~~GIG~a~a~~l~-~~G~~-v~~~~~~~~~~~~~~~~~~~~~~~~~~~~Dv~d~~~v~~~~~~~~~~-   81 (260)
T PRK06997          5 AGKRILITGLLSNRSIAYGIAKACK-REGAE-LAFTYVGDRFKDRITEFAAEFGSDLVFPCDVASDEQIDALFASLGQH-   81 (260)
T ss_pred             CCcEEEEeCCCCCCcHHHHHHHHHH-HCCCe-EEEEccchHHHHHHHHHHHhcCCcceeeccCCCHHHHHHHHHHHHHH-
Confidence            4678999984   589999998554 56995 5554332   23332 334455332222222 223444444444332 


Q ss_pred             CCCceEEEeCCCC
Q 017868          253 GTGIDVSFDCAGL  265 (365)
Q Consensus       253 ~~~~d~vid~~g~  265 (365)
                      .+++|+++.+.|.
T Consensus        82 ~g~iD~lvnnAG~   94 (260)
T PRK06997         82 WDGLDGLVHSIGF   94 (260)
T ss_pred             hCCCcEEEEcccc
Confidence            3589999998763

>PRK07577 short chain dehydrogenase; Provisional

Probab=93.98  E-value=0.37  Score=41.24  Aligned_cols=74  Identities=18%  Similarity=0.335  Sum_probs=44.4

Q ss_pred             CCEEEEEcC-CHHHHHHHHHHHHHCCCCeEEEEeCChhHHHHHHHcCCCEEEeCCC-CcccHHHHHHHHHHHhCCCceEE
Q 017868          182 ETNVLIMGA-GPIGLVTMLGAPRAFGAPRIVIVDVDDYRLSVAKEIGADNIVKVST-NLQDIAEEVEKIQKAMGTGIDVS  259 (365)
Q Consensus       182 g~~vlI~G~-g~~G~~ai~~l~~~~g~~~vi~v~~~~~~~~~~~~~g~~~~~~~~~-~~~~~~~~i~~~~~~~~~~~d~v  259 (365)
                      +.++||+|+ |.+|..+++.+ ...|+ .|+.+.++.++     .+.. ..+..+- +.++..+.+.++.+  ..+.|++
T Consensus         3 ~k~vlItG~s~~iG~~ia~~l-~~~G~-~v~~~~r~~~~-----~~~~-~~~~~D~~~~~~~~~~~~~~~~--~~~~d~v   72 (234)
T PRK07577          3 SRTVLVTGATKGIGLALSLRL-ANLGH-QVIGIARSAID-----DFPG-ELFACDLADIEQTAATLAQINE--IHPVDAI   72 (234)
T ss_pred             CCEEEEECCCCcHHHHHHHHH-HHCCC-EEEEEeCCccc-----ccCc-eEEEeeCCCHHHHHHHHHHHHH--hCCCcEE
Confidence            568999987 99999999945 45688 56777665543     1111 1222211 22333344444433  2368999


Q ss_pred             EeCCCC
Q 017868          260 FDCAGL  265 (365)
Q Consensus       260 id~~g~  265 (365)
                      |.+.|.
T Consensus        73 i~~ag~   78 (234)
T PRK07577         73 VNNVGI   78 (234)
T ss_pred             EECCCC
Confidence            998873

>PRK07791 short chain dehydrogenase; Provisional

Probab=93.97  E-value=0.66  Score=41.31  Aligned_cols=83  Identities=28%  Similarity=0.337  Sum_probs=46.9

Q ss_pred             CCCCEEEEEcC-CHHHHHHHHHHHHHCCCCeEEEEeCCh---------hHH-HHHHHc---CCCE-EEeCCC-CcccHHH
Q 017868          180 GPETNVLIMGA-GPIGLVTMLGAPRAFGAPRIVIVDVDD---------YRL-SVAKEI---GADN-IVKVST-NLQDIAE  243 (365)
Q Consensus       180 ~~g~~vlI~G~-g~~G~~ai~~l~~~~g~~~vi~v~~~~---------~~~-~~~~~~---g~~~-~~~~~~-~~~~~~~  243 (365)
                      -++.++||+|+ +++|.++++.++ ..|++ ++.++++.         ++. +..+++   +... .+..+- +.++..+
T Consensus         4 l~~k~~lITGas~GIG~aia~~la-~~G~~-vii~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~Dv~~~~~v~~   81 (286)
T PRK07791          4 LDGRVVIVTGAGGGIGRAHALAFA-AEGAR-VVVNDIGVGLDGSASGGSAAQAVVDEIVAAGGEAVANGDDIADWDGAAN   81 (286)
T ss_pred             cCCCEEEEECCCchHHHHHHHHHH-HCCCE-EEEeeCCccccccccchhHHHHHHHHHHhcCCceEEEeCCCCCHHHHHH
Confidence            35789999987 999999999555 56985 55554432         222 223322   3321 122221 2233334


Q ss_pred             HHHHHHHHhCCCceEEEeCCCC
Q 017868          244 EVEKIQKAMGTGIDVSFDCAGL  265 (365)
Q Consensus       244 ~i~~~~~~~~~~~d~vid~~g~  265 (365)
                      .++++.+. -+.+|++|.++|.
T Consensus        82 ~~~~~~~~-~g~id~lv~nAG~  102 (286)
T PRK07791         82 LVDAAVET-FGGLDVLVNNAGI  102 (286)
T ss_pred             HHHHHHHh-cCCCCEEEECCCC
Confidence            44444332 3579999998873

>PLN00203 glutamyl-tRNA reductase

Probab=93.92  E-value=0.4  Score=46.36  Aligned_cols=74  Identities=22%  Similarity=0.385  Sum_probs=49.7

Q ss_pred             CCEEEEEcCCHHHHHHHHHHHHHCCCCeEEEEeCChhHHH-HHHHcCCCEEEeCCCCcccHHHHHHHHHHHhCCCceEEE
Q 017868          182 ETNVLIMGAGPIGLVTMLGAPRAFGAPRIVIVDVDDYRLS-VAKEIGADNIVKVSTNLQDIAEEVEKIQKAMGTGIDVSF  260 (365)
Q Consensus       182 g~~vlI~G~g~~G~~ai~~l~~~~g~~~vi~v~~~~~~~~-~~~~~g~~~~~~~~~~~~~~~~~i~~~~~~~~~~~d~vi  260 (365)
                      +.+|+|.|+|.+|.+++. .+...|++.++++.++.++.+ ++..++...+..     ..+.+ +.+.    -..+|+||
T Consensus       266 ~kkVlVIGAG~mG~~~a~-~L~~~G~~~V~V~nRs~era~~La~~~~g~~i~~-----~~~~d-l~~a----l~~aDVVI  334 (519)
T PLN00203        266 SARVLVIGAGKMGKLLVK-HLVSKGCTKMVVVNRSEERVAALREEFPDVEIIY-----KPLDE-MLAC----AAEADVVF  334 (519)
T ss_pred             CCEEEEEeCHHHHHHHHH-HHHhCCCCeEEEEeCCHHHHHHHHHHhCCCceEe-----ecHhh-HHHH----HhcCCEEE
Confidence            688999999999999999 556679878888888888765 445564221111     11111 1111    24789999


Q ss_pred             eCCCCH
Q 017868          261 DCAGLN  266 (365)
Q Consensus       261 d~~g~~  266 (365)
                      .|++.+
T Consensus       335 sAT~s~  340 (519)
T PLN00203        335 TSTSSE  340 (519)
T ss_pred             EccCCC
Confidence            998754

>PRK09730 putative NAD(P)-binding oxidoreductase; Provisional

Probab=93.92  E-value=0.62  Score=40.18  Aligned_cols=81  Identities=16%  Similarity=0.176  Sum_probs=45.6

Q ss_pred             CEEEEEcC-CHHHHHHHHHHHHHCCCCeEEEEeCChhHHH-HH---HHcCCC-EEEeCCC-CcccHHHHHHHHHHHhCCC
Q 017868          183 TNVLIMGA-GPIGLVTMLGAPRAFGAPRIVIVDVDDYRLS-VA---KEIGAD-NIVKVST-NLQDIAEEVEKIQKAMGTG  255 (365)
Q Consensus       183 ~~vlI~G~-g~~G~~ai~~l~~~~g~~~vi~v~~~~~~~~-~~---~~~g~~-~~~~~~~-~~~~~~~~i~~~~~~~~~~  255 (365)
                      .++||+|+ |.+|...+..++ ..|+++++...+++++.+ ..   +..+.. ..+..+- +.+++.+.++++.+ ..++
T Consensus         2 ~~~lItGa~g~iG~~l~~~l~-~~g~~v~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~D~~d~~~i~~~~~~~~~-~~~~   79 (247)
T PRK09730          2 AIALVTGGSRGIGRATALLLA-QEGYTVAVNYQQNLHAAQEVVNLITQAGGKAFVLQADISDENQVVAMFTAIDQ-HDEP   79 (247)
T ss_pred             CEEEEeCCCchHHHHHHHHHH-HCCCEEEEEeCCChHHHHHHHHHHHhCCCeEEEEEccCCCHHHHHHHHHHHHH-hCCC
Confidence            37899987 999999999554 569864444455554432 22   223322 1222222 22233333444332 2468


Q ss_pred             ceEEEeCCCC
Q 017868          256 IDVSFDCAGL  265 (365)
Q Consensus       256 ~d~vid~~g~  265 (365)
                      +|++|.++|.
T Consensus        80 id~vi~~ag~   89 (247)
T PRK09730         80 LAALVNNAGI   89 (247)
T ss_pred             CCEEEECCCC
Confidence            9999998874

>PRK04207 glyceraldehyde-3-phosphate dehydrogenase; Provisional

Probab=93.90  E-value=0.67  Score=42.47  Aligned_cols=99  Identities=18%  Similarity=0.069  Sum_probs=54.7

Q ss_pred             EEEEEcCCHHHHHHHHHHHHHCCCCeEEEEeCChhHHH-HHHHcCCCEEEe-------CCCCcccHHHHHHHHHHHhCCC
Q 017868          184 NVLIMGAGPIGLVTMLGAPRAFGAPRIVIVDVDDYRLS-VAKEIGADNIVK-------VSTNLQDIAEEVEKIQKAMGTG  255 (365)
Q Consensus       184 ~vlI~G~g~~G~~ai~~l~~~~g~~~vi~v~~~~~~~~-~~~~~g~~~~~~-------~~~~~~~~~~~i~~~~~~~~~~  255 (365)
                      +|.|.|.|.+|+..++.+...-.++.+.+.+.+.+... +++..|.+....       +....-.......+.    -.+
T Consensus         3 kVaI~G~GrIGr~va~al~~~~d~eLvav~d~~~~~~~~la~~~G~~~~~~~~~~~~~~~~~~i~V~~~~~el----~~~   78 (341)
T PRK04207          3 KVGVNGYGTIGKRVADAVAAQPDMELVGVAKTKPDYEARVAVEKGYPLYVADPEREKAFEEAGIPVAGTIEDL----LEK   78 (341)
T ss_pred             EEEEECCCHHHHHHHHHHhcCCCcEEEEEECCChHHHHHHHHhcCCCccccCccccccccCCceEEcCChhHh----hcc
Confidence            68899999999999995555566755555554444333 344455331000       000000000011122    146


Q ss_pred             ceEEEeCCCCHHHHHHHHHhcccCCEEEEEc
Q 017868          256 IDVSFDCAGLNKTMSTALGATCAGGKVCLVG  286 (365)
Q Consensus       256 ~d~vid~~g~~~~~~~~~~~l~~~G~~~~~g  286 (365)
                      +|+||||++...+....-.++..+-.++..+
T Consensus        79 vDVVIdaT~~~~~~e~a~~~~~aGk~VI~~~  109 (341)
T PRK04207         79 ADIVVDATPGGVGAKNKELYEKAGVKAIFQG  109 (341)
T ss_pred             CCEEEECCCchhhHHHHHHHHHCCCEEEEcC
Confidence            9999999997766666666666654444444

>PRK13303 L-aspartate dehydrogenase; Provisional

Probab=93.90  E-value=0.67  Score=40.82  Aligned_cols=89  Identities=16%  Similarity=0.213  Sum_probs=52.8

Q ss_pred             EEEEEcCCHHHHHHHHHHHHHCCCCeEEEEeCChhHHHHHHHcCCCEEEeCCCCcccHHHHHHHHHHHhCCCceEEEeCC
Q 017868          184 NVLIMGAGPIGLVTMLGAPRAFGAPRIVIVDVDDYRLSVAKEIGADNIVKVSTNLQDIAEEVEKIQKAMGTGIDVSFDCA  263 (365)
Q Consensus       184 ~vlI~G~g~~G~~ai~~l~~~~g~~~vi~v~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~i~~~~~~~~~~~d~vid~~  263 (365)
                      +|.|+|+|.+|...++.+.+..+.+.+.++..........+.++.. +..+    .++    .++    ...+|+|++|+
T Consensus         3 rVgIiG~G~iG~~~~~~l~~~~~~~l~~v~~~~~~~~~~~~~~~~~-~~~~----~d~----~~l----~~~~DvVve~t   69 (265)
T PRK13303          3 KVAMIGFGAIGAAVLELLEHDPDLRVDWVIVPEHSIDAVRRALGEA-VRVV----SSV----DAL----PQRPDLVVECA   69 (265)
T ss_pred             EEEEECCCHHHHHHHHHHhhCCCceEEEEEEcCCCHHHHhhhhccC-Ceee----CCH----HHh----ccCCCEEEECC
Confidence            6889999999999888555544564444443322222222333221 1111    122    122    24689999999


Q ss_pred             CCHHHHHHHHHhcccCCEEEEE
Q 017868          264 GLNKTMSTALGATCAGGKVCLV  285 (365)
Q Consensus       264 g~~~~~~~~~~~l~~~G~~~~~  285 (365)
                      +...+.+....+|..+-+++..
T Consensus        70 ~~~~~~e~~~~aL~aGk~Vvi~   91 (265)
T PRK13303         70 GHAALKEHVVPILKAGIDCAVI   91 (265)
T ss_pred             CHHHHHHHHHHHHHcCCCEEEe
Confidence            9877777888888876666554

>PRK07424 bifunctional sterol desaturase/short chain dehydrogenase; Validated

Probab=93.90  E-value=0.49  Score=44.35  Aligned_cols=76  Identities=13%  Similarity=0.242  Sum_probs=44.2

Q ss_pred             CCCEEEEEcC-CHHHHHHHHHHHHHCCCCeEEEEeCChhHHHH-HHHcCCC-EEEeCCCCcccHHHHHHHHHHHhCCCce
Q 017868          181 PETNVLIMGA-GPIGLVTMLGAPRAFGAPRIVIVDVDDYRLSV-AKEIGAD-NIVKVSTNLQDIAEEVEKIQKAMGTGID  257 (365)
Q Consensus       181 ~g~~vlI~G~-g~~G~~ai~~l~~~~g~~~vi~v~~~~~~~~~-~~~~g~~-~~~~~~~~~~~~~~~i~~~~~~~~~~~d  257 (365)
                      .+.+++|+|+ |++|.++++.+ ...|+ +|+++++++++.+. ....+.. ..+..+-  .+. +.+.+.    -+++|
T Consensus       177 ~gK~VLITGASgGIG~aLA~~L-a~~G~-~Vi~l~r~~~~l~~~~~~~~~~v~~v~~Dv--sd~-~~v~~~----l~~ID  247 (406)
T PRK07424        177 KGKTVAVTGASGTLGQALLKEL-HQQGA-KVVALTSNSDKITLEINGEDLPVKTLHWQV--GQE-AALAEL----LEKVD  247 (406)
T ss_pred             CCCEEEEeCCCCHHHHHHHHHH-HHCCC-EEEEEeCCHHHHHHHHhhcCCCeEEEEeeC--CCH-HHHHHH----hCCCC
Confidence            4679999987 99999999945 45698 56667666655432 2211111 1222211  121 223332    24799


Q ss_pred             EEEeCCCC
Q 017868          258 VSFDCAGL  265 (365)
Q Consensus       258 ~vid~~g~  265 (365)
                      ++|.+.|.
T Consensus       248 iLInnAGi  255 (406)
T PRK07424        248 ILIINHGI  255 (406)
T ss_pred             EEEECCCc
Confidence            99988763

>TIGR01963 PHB_DH 3-hydroxybutyrate dehydrogenase

Probab=93.90  E-value=0.76  Score=39.84  Aligned_cols=79  Identities=25%  Similarity=0.381  Sum_probs=46.4

Q ss_pred             CEEEEEcC-CHHHHHHHHHHHHHCCCCeEEEEeCChhHHHHHHH----cCCCE-EEeCCC-CcccHHHHHHHHHHHhCCC
Q 017868          183 TNVLIMGA-GPIGLVTMLGAPRAFGAPRIVIVDVDDYRLSVAKE----IGADN-IVKVST-NLQDIAEEVEKIQKAMGTG  255 (365)
Q Consensus       183 ~~vlI~G~-g~~G~~ai~~l~~~~g~~~vi~v~~~~~~~~~~~~----~g~~~-~~~~~~-~~~~~~~~i~~~~~~~~~~  255 (365)
                      .++||+|+ |.+|..++..++ ..|+ .|++++++.++.+.+.+    .+... .+..+- +.+++...++.+.+. -.+
T Consensus         2 ~~vlItGa~g~lG~~l~~~l~-~~g~-~v~~~~r~~~~~~~~~~~~~~~~~~~~~~~~D~~~~~~~~~~~~~~~~~-~~~   78 (255)
T TIGR01963         2 KTALVTGAASGIGLAIALALA-AAGA-NVVVNDLGEAGAEAAAKVATDAGGSVIYLVADVTKEDEIADMIAAAAAE-FGG   78 (255)
T ss_pred             CEEEEcCCcchHHHHHHHHHH-HCCC-EEEEEeCCHHHHHHHHHHHHhcCCceEEEECCCCCHHHHHHHHHHHHHh-cCC
Confidence            57999987 999999998454 5688 57777777765543322    22221 122222 223333333343332 356


Q ss_pred             ceEEEeCCC
Q 017868          256 IDVSFDCAG  264 (365)
Q Consensus       256 ~d~vid~~g  264 (365)
                      +|++|.+.+
T Consensus        79 ~d~vi~~a~   87 (255)
T TIGR01963        79 LDILVNNAG   87 (255)
T ss_pred             CCEEEECCC
Confidence            899998776

This model represents a subfamily of the short chain dehydrogenases. Characterized members so far as 3-hydroxybutyrate dehydrogenases and are found in species that accumulate ester polmers called polyhydroxyalkanoic acids (PHAs) under certain conditions. Several members of the family are from species not known to accumulate PHAs, including Oceanobacillus iheyensis and Bacillus subtilis. However, polymer formation is not required for there be a role for 3-hydroxybutyrate dehydrogenase; it may be members of this family have the same function in those species.

>PRK06077 fabG 3-ketoacyl-(acyl-carrier-protein) reductase; Provisional

Probab=93.90  E-value=1.9  Score=37.28  Aligned_cols=81  Identities=16%  Similarity=0.150  Sum_probs=44.7

Q ss_pred             CCEEEEEcC-CHHHHHHHHHHHHHCCCCeEEEEeCChhHH-H---HHHHcCCCE-EEeCCC-CcccHHHHHHHHHHHhCC
Q 017868          182 ETNVLIMGA-GPIGLVTMLGAPRAFGAPRIVIVDVDDYRL-S---VAKEIGADN-IVKVST-NLQDIAEEVEKIQKAMGT  254 (365)
Q Consensus       182 g~~vlI~G~-g~~G~~ai~~l~~~~g~~~vi~v~~~~~~~-~---~~~~~g~~~-~~~~~~-~~~~~~~~i~~~~~~~~~  254 (365)
                      +.++||+|+ |.+|...+..++ ..|+++++...++.++. +   .++..+... .+..+- +..++...++++.+. -.
T Consensus         6 ~~~vlitGasg~iG~~l~~~l~-~~g~~v~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~D~~~~~~~~~~~~~~~~~-~~   83 (252)
T PRK06077          6 DKVVVVTGSGRGIGRAIAVRLA-KEGSLVVVNAKKRAEEMNETLKMVKENGGEGIGVLADVSTREGCETLAKATIDR-YG   83 (252)
T ss_pred             CcEEEEeCCCChHHHHHHHHHH-HCCCEEEEEeCCChHHHHHHHHHHHHcCCeeEEEEeccCCHHHHHHHHHHHHHH-cC
Confidence            578999987 899999998454 66886444443333322 2   233333321 121111 122333333443332 25


Q ss_pred             CceEEEeCCC
Q 017868          255 GIDVSFDCAG  264 (365)
Q Consensus       255 ~~d~vid~~g  264 (365)
                      ++|.+|.++|
T Consensus        84 ~~d~vi~~ag   93 (252)
T PRK06077         84 VADILVNNAG   93 (252)
T ss_pred             CCCEEEECCC
Confidence            7999999887

>PRK07074 short chain dehydrogenase; Provisional

Probab=93.89  E-value=0.85  Score=39.69  Aligned_cols=81  Identities=25%  Similarity=0.328  Sum_probs=47.4

Q ss_pred             CCEEEEEcC-CHHHHHHHHHHHHHCCCCeEEEEeCChhHHH-HHHHcCCC--EEEeCCCC-cccHHHHHHHHHHHhCCCc
Q 017868          182 ETNVLIMGA-GPIGLVTMLGAPRAFGAPRIVIVDVDDYRLS-VAKEIGAD--NIVKVSTN-LQDIAEEVEKIQKAMGTGI  256 (365)
Q Consensus       182 g~~vlI~G~-g~~G~~ai~~l~~~~g~~~vi~v~~~~~~~~-~~~~~g~~--~~~~~~~~-~~~~~~~i~~~~~~~~~~~  256 (365)
                      +.++||+|+ |.+|..++..++ ..|+ .++.++++.++.+ +.+.+...  ..+..+-. .+++...+.++.+. -+++
T Consensus         2 ~k~ilItGat~~iG~~la~~L~-~~g~-~v~~~~r~~~~~~~~~~~~~~~~~~~~~~D~~~~~~~~~~~~~~~~~-~~~~   78 (257)
T PRK07074          2 KRTALVTGAAGGIGQALARRFL-AAGD-RVLALDIDAAALAAFADALGDARFVPVACDLTDAASLAAALANAAAE-RGPV   78 (257)
T ss_pred             CCEEEEECCcchHHHHHHHHHH-HCCC-EEEEEeCCHHHHHHHHHHhcCCceEEEEecCCCHHHHHHHHHHHHHH-cCCC
Confidence            468999987 999999999554 5688 5677777766554 33433211  12222221 12222333333322 2469


Q ss_pred             eEEEeCCCC
Q 017868          257 DVSFDCAGL  265 (365)
Q Consensus       257 d~vid~~g~  265 (365)
                      |++|.+.|.
T Consensus        79 d~vi~~ag~   87 (257)
T PRK07074         79 DVLVANAGA   87 (257)
T ss_pred             CEEEECCCC
Confidence            999998873

>PRK00536 speE spermidine synthase; Provisional

Probab=93.88  E-value=0.34  Score=42.32  Aligned_cols=101  Identities=10%  Similarity=-0.130  Sum_probs=63.4

Q ss_pred             CCCCEEEEEcCCHHHHHHHHHHHHHCCCCeEEEEeCChhHHHHHHHcCCCEEEeCCCCcccHHHHHHHHHHHhCCCceEE
Q 017868          180 GPETNVLIMGAGPIGLVTMLGAPRAFGAPRIVIVDVDDYRLSVAKEIGADNIVKVSTNLQDIAEEVEKIQKAMGTGIDVS  259 (365)
Q Consensus       180 ~~g~~vlI~G~g~~G~~ai~~l~~~~g~~~vi~v~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~i~~~~~~~~~~~d~v  259 (365)
                      ...++|||.|+|- |.++-+ ++|+-  +.|..|+-+++-.++++++-....-.+++..-.+...+.   +...+.+|+|
T Consensus        71 ~~pk~VLIiGGGD-Gg~~RE-vLkh~--~~v~mVeID~~Vv~~~k~~lP~~~~~~~DpRv~l~~~~~---~~~~~~fDVI  143 (262)
T PRK00536         71 KELKEVLIVDGFD-LELAHQ-LFKYD--THVDFVQADEKILDSFISFFPHFHEVKNNKNFTHAKQLL---DLDIKKYDLI  143 (262)
T ss_pred             CCCCeEEEEcCCc-hHHHHH-HHCcC--CeeEEEECCHHHHHHHHHHCHHHHHhhcCCCEEEeehhh---hccCCcCCEE
Confidence            4458999998765 556667 66664  378999999998888888321100011111111111121   1123679998


Q ss_pred             E-eCCCCHHHHHHHHHhcccCCEEEEEcc
Q 017868          260 F-DCAGLNKTMSTALGATCAGGKVCLVGM  287 (365)
Q Consensus       260 i-d~~g~~~~~~~~~~~l~~~G~~~~~g~  287 (365)
                      | |+.-.+.-...+.++|+++|.++..+.
T Consensus       144 IvDs~~~~~fy~~~~~~L~~~Gi~v~Qs~  172 (262)
T PRK00536        144 ICLQEPDIHKIDGLKRMLKEDGVFISVAK  172 (262)
T ss_pred             EEcCCCChHHHHHHHHhcCCCcEEEECCC
Confidence            6 445566677788999999999998753

>PLN03013 cysteine synthase

Probab=93.86  E-value=2  Score=40.51  Aligned_cols=57  Identities=21%  Similarity=0.314  Sum_probs=43.6

Q ss_pred             HhcCCCCCCEEEEEc-CCHHHHHHHHHHHHHCCCCeEEEEe--CChhHHHHHHHcCCCEEE
Q 017868          175 RRANIGPETNVLIMG-AGPIGLVTMLGAPRAFGAPRIVIVD--VDDYRLSVAKEIGADNIV  232 (365)
Q Consensus       175 ~~~~~~~g~~vlI~G-~g~~G~~ai~~l~~~~g~~~vi~v~--~~~~~~~~~~~~g~~~~~  232 (365)
                      +.+.+++|.+.+|.. +|..|.+++. .++.+|++.++++.  .+++|.+.++.+|+.-+.
T Consensus       167 ~~G~l~pG~~~VVeaSSGN~G~ALA~-~a~~~G~~~~VvvP~~~s~~K~~~ira~GAeVi~  226 (429)
T PLN03013        167 QKGFISPGKSVLVEPTSGNTGIGLAF-IAASRGYRLILTMPASMSMERRVLLKAFGAELVL  226 (429)
T ss_pred             HcCCcCCCCcEEEEECCcHHHHHHHH-HHHHcCCCEEEEECCCCcHHHHHHHHHcCCEEEE
Confidence            456678886666664 5999998888 99999998777764  346788899999987554

>TIGR02752 MenG_heptapren 2-heptaprenyl-1,4-naphthoquinone methyltransferase

Probab=93.86  E-value=0.91  Score=38.94  Aligned_cols=103  Identities=20%  Similarity=0.257  Sum_probs=62.1

Q ss_pred             HhcCCCCCCEEEEEcCCHHHHHHHHHHHHHCCC-CeEEEEeCChhHHHHHHH----cCCCEEEeCCCCcccHHHHHHHHH
Q 017868          175 RRANIGPETNVLIMGAGPIGLVTMLGAPRAFGA-PRIVIVDVDDYRLSVAKE----IGADNIVKVSTNLQDIAEEVEKIQ  249 (365)
Q Consensus       175 ~~~~~~~g~~vlI~G~g~~G~~ai~~l~~~~g~-~~vi~v~~~~~~~~~~~~----~g~~~~~~~~~~~~~~~~~i~~~~  249 (365)
                      ....++++++||=.|+|. |..+.. +++..+. ..+++++.+++..+.+++    .+.+.+.....+..++       .
T Consensus        39 ~~l~~~~~~~vLDiGcG~-G~~~~~-la~~~~~~~~v~gvD~s~~~~~~a~~~~~~~~~~~v~~~~~d~~~~-------~  109 (231)
T TIGR02752        39 KRMNVQAGTSALDVCCGT-ADWSIA-LAEAVGPEGHVIGLDFSENMLSVGRQKVKDAGLHNVELVHGNAMEL-------P  109 (231)
T ss_pred             HhcCCCCCCEEEEeCCCc-CHHHHH-HHHHhCCCCEEEEEECCHHHHHHHHHHHHhcCCCceEEEEechhcC-------C
Confidence            456778899999998754 555555 5555442 379999999887665543    2332221111111111       0


Q ss_pred             HHhCCCceEEEeCCC------CHHHHHHHHHhcccCCEEEEEcc
Q 017868          250 KAMGTGIDVSFDCAG------LNKTMSTALGATCAGGKVCLVGM  287 (365)
Q Consensus       250 ~~~~~~~d~vid~~g------~~~~~~~~~~~l~~~G~~~~~g~  287 (365)
                       .....+|+|+-...      ....+..+.+.|+++|.++....
T Consensus       110 -~~~~~fD~V~~~~~l~~~~~~~~~l~~~~~~Lk~gG~l~~~~~  152 (231)
T TIGR02752       110 -FDDNSFDYVTIGFGLRNVPDYMQVLREMYRVVKPGGKVVCLET  152 (231)
T ss_pred             -CCCCCccEEEEecccccCCCHHHHHHHHHHHcCcCeEEEEEEC
Confidence             01357999975322      12356678899999999987643

MenG is a generic term for a methyltransferase that catalyzes the last step in menaquinone biosynthesis; the exact enzymatic activity differs for different MenG because the menaquinone differ in their prenoid side chains in different species. Members of this MenG protein family are 2-heptaprenyl-1,4-naphthoquinone methyltransferase, and are found together in operons with the two subunits of the heptaprenyl diphosphate synthase in Bacillus subtilis and related species.

>TIGR00563 rsmB ribosomal RNA small subunit methyltransferase RsmB

Probab=93.85  E-value=1.3  Score=42.06  Aligned_cols=104  Identities=15%  Similarity=0.149  Sum_probs=61.6

Q ss_pred             HhcCCCCCCEEEEEcCCHHHHHHHHHHHHHCCCCeEEEEeCChhHHHH----HHHcCCCE-EEeCCCCcccHHHHHHHHH
Q 017868          175 RRANIGPETNVLIMGAGPIGLVTMLGAPRAFGAPRIVIVDVDDYRLSV----AKEIGADN-IVKVSTNLQDIAEEVEKIQ  249 (365)
Q Consensus       175 ~~~~~~~g~~vlI~G~g~~G~~ai~~l~~~~g~~~vi~v~~~~~~~~~----~~~~g~~~-~~~~~~~~~~~~~~i~~~~  249 (365)
                      ....+++|++||=.|+|+ |..++. +++..+...+++++.++++.+.    ++++|... +.....+..+...    +.
T Consensus       232 ~~L~~~~g~~VLDlcag~-G~kt~~-la~~~~~~~v~a~D~~~~~l~~~~~n~~r~g~~~~v~~~~~d~~~~~~----~~  305 (426)
T TIGR00563       232 TWLAPQNEETILDACAAP-GGKTTH-ILELAPQAQVVALDIHEHRLKRVYENLKRLGLTIKAETKDGDGRGPSQ----WA  305 (426)
T ss_pred             HHhCCCCCCeEEEeCCCc-cHHHHH-HHHHcCCCeEEEEeCCHHHHHHHHHHHHHcCCCeEEEEeccccccccc----cc
Confidence            445678999998887643 334444 4444443479999999988654    45567652 2112221111100    00


Q ss_pred             HHhCCCceEEEe---CCCC-------------------------HHHHHHHHHhcccCCEEEEEc
Q 017868          250 KAMGTGIDVSFD---CAGL-------------------------NKTMSTALGATCAGGKVCLVG  286 (365)
Q Consensus       250 ~~~~~~~d~vid---~~g~-------------------------~~~~~~~~~~l~~~G~~~~~g  286 (365)
                        ....+|.|+-   |+|.                         ...+..+++.|++||+++...
T Consensus       306 --~~~~fD~VllDaPcSg~G~~~~~p~~~~~~~~~~~~~l~~lQ~~lL~~a~~~LkpgG~lvyst  368 (426)
T TIGR00563       306 --ENEQFDRILLDAPCSATGVIRRHPDIKWLRKPRDIAELAELQSEILDAIWPLLKTGGTLVYAT  368 (426)
T ss_pred             --cccccCEEEEcCCCCCCcccccCcchhhcCCHHHHHHHHHHHHHHHHHHHHhcCCCcEEEEEe
Confidence              1357999874   4442                         135667888999999998653

The seed alignment is built from bacterial sequences only. Eukaryotic homologs include Nop2, a protein required for processing pre-rRNA, that is likely also a rRNA methyltransferase, although the fine specificity may differ. Cutoff scores are set to avoid treating archaeal and eukaroytic homologs automatically as functionally equivalent, although they may have very similar roles.

>PRK08303 short chain dehydrogenase; Provisional

Probab=93.85  E-value=0.9  Score=40.93  Aligned_cols=81  Identities=19%  Similarity=0.251  Sum_probs=46.2

Q ss_pred             CCCEEEEEcC-CHHHHHHHHHHHHHCCCCeEEEEeCCh----------hHH----HHHHHcCCCE-EEeCCC-CcccHHH
Q 017868          181 PETNVLIMGA-GPIGLVTMLGAPRAFGAPRIVIVDVDD----------YRL----SVAKEIGADN-IVKVST-NLQDIAE  243 (365)
Q Consensus       181 ~g~~vlI~G~-g~~G~~ai~~l~~~~g~~~vi~v~~~~----------~~~----~~~~~~g~~~-~~~~~~-~~~~~~~  243 (365)
                      .+.++||+|+ +++|.++++.++ ..|+ .|+.+.++.          ++.    +.++..+... .+..+- +.++...
T Consensus         7 ~~k~~lITGgs~GIG~aia~~la-~~G~-~Vv~~~r~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~Dv~~~~~v~~   84 (305)
T PRK08303          7 RGKVALVAGATRGAGRGIAVELG-AAGA-TVYVTGRSTRARRSEYDRPETIEETAELVTAAGGRGIAVQVDHLVPEQVRA   84 (305)
T ss_pred             CCCEEEEeCCCchHHHHHHHHHH-HCCC-EEEEEecccccccccccccchHHHHHHHHHhcCCceEEEEcCCCCHHHHHH
Confidence            4678999987 899999999554 5698 466665542          222    2233334321 222222 2233333


Q ss_pred             HHHHHHHHhCCCceEEEeCC-C
Q 017868          244 EVEKIQKAMGTGIDVSFDCA-G  264 (365)
Q Consensus       244 ~i~~~~~~~~~~~d~vid~~-g  264 (365)
                      .+.++.+. -+.+|++|.++ |
T Consensus        85 ~~~~~~~~-~g~iDilVnnA~g  105 (305)
T PRK08303         85 LVERIDRE-QGRLDILVNDIWG  105 (305)
T ss_pred             HHHHHHHH-cCCccEEEECCcc
Confidence            44443332 24799999987 5

>PRK08762 molybdopterin biosynthesis protein MoeB; Validated

Probab=93.84  E-value=0.81  Score=42.61  Aligned_cols=35  Identities=40%  Similarity=0.501  Sum_probs=29.8

Q ss_pred             CCCEEEEEcCCHHHHHHHHHHHHHCCCCeEEEEeCC
Q 017868          181 PETNVLIMGAGPIGLVTMLGAPRAFGAPRIVIVDVD  216 (365)
Q Consensus       181 ~g~~vlI~G~g~~G~~ai~~l~~~~g~~~vi~v~~~  216 (365)
                      .+.+|+|.|+|++|..++. .+...|...+..++.+
T Consensus       134 ~~~~VlvvG~GG~Gs~ia~-~La~~Gvg~i~lvD~d  168 (376)
T PRK08762        134 LEARVLLIGAGGLGSPAAL-YLAAAGVGTLGIVDHD  168 (376)
T ss_pred             hcCcEEEECCCHHHHHHHH-HHHHcCCCeEEEEeCC
Confidence            5568999999999999999 5567799999999876

>PRK08936 glucose-1-dehydrogenase; Provisional

Probab=93.82  E-value=0.77  Score=40.11  Aligned_cols=83  Identities=19%  Similarity=0.199  Sum_probs=45.1

Q ss_pred             CCCEEEEEcC-CHHHHHHHHHHHHHCCCCeEEEEeCChhHHH----HHHHcCCCE-EEeCCC-CcccHHHHHHHHHHHhC
Q 017868          181 PETNVLIMGA-GPIGLVTMLGAPRAFGAPRIVIVDVDDYRLS----VAKEIGADN-IVKVST-NLQDIAEEVEKIQKAMG  253 (365)
Q Consensus       181 ~g~~vlI~G~-g~~G~~ai~~l~~~~g~~~vi~v~~~~~~~~----~~~~~g~~~-~~~~~~-~~~~~~~~i~~~~~~~~  253 (365)
                      ++.++||+|+ +++|..+++.+ ...|+++++...++++..+    .++..+... .+..+- +.++..+.+..+.+. .
T Consensus         6 ~~k~~lItGa~~gIG~~ia~~l-~~~G~~vvi~~~~~~~~~~~~~~~l~~~~~~~~~~~~Dl~~~~~i~~~~~~~~~~-~   83 (261)
T PRK08936          6 EGKVVVITGGSTGLGRAMAVRF-GKEKAKVVINYRSDEEEANDVAEEIKKAGGEAIAVKGDVTVESDVVNLIQTAVKE-F   83 (261)
T ss_pred             CCCEEEEeCCCChHHHHHHHHH-HHCCCEEEEEeCCCHHHHHHHHHHHHHcCCeEEEEEecCCCHHHHHHHHHHHHHH-c
Confidence            5779999987 99999999945 4669854443332333222    222333221 122111 222333333333322 3


Q ss_pred             CCceEEEeCCCC
Q 017868          254 TGIDVSFDCAGL  265 (365)
Q Consensus       254 ~~~d~vid~~g~  265 (365)
                      +++|+++.+.|.
T Consensus        84 g~id~lv~~ag~   95 (261)
T PRK08936         84 GTLDVMINNAGI   95 (261)
T ss_pred             CCCCEEEECCCC
Confidence            579999998873

>PRK11579 putative oxidoreductase; Provisional

Probab=93.80  E-value=1.3  Score=40.68  Aligned_cols=128  Identities=17%  Similarity=0.125  Sum_probs=74.4

Q ss_pred             CEEEEEcCCHHHH-HHHHHHHHHCCCCeEEEEeCChhHHHHHHHcCCCEEEeCCCCcccHHHHHHHHHHHhCCCceEEEe
Q 017868          183 TNVLIMGAGPIGL-VTMLGAPRAFGAPRIVIVDVDDYRLSVAKEIGADNIVKVSTNLQDIAEEVEKIQKAMGTGIDVSFD  261 (365)
Q Consensus       183 ~~vlI~G~g~~G~-~ai~~l~~~~g~~~vi~v~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~i~~~~~~~~~~~d~vid  261 (365)
                      -+|.|+|+|.+|. ..+..+.+.-+++.+.+.+.+.++..  .+++....  +    .++.+.+.      ...+|+|+.
T Consensus         5 irvgiiG~G~i~~~~~~~~~~~~~~~~l~av~d~~~~~~~--~~~~~~~~--~----~~~~ell~------~~~vD~V~I   70 (346)
T PRK11579          5 IRVGLIGYGYASKTFHAPLIAGTPGLELAAVSSSDATKVK--ADWPTVTV--V----SEPQHLFN------DPNIDLIVI   70 (346)
T ss_pred             ceEEEECCCHHHHHHHHHHHhhCCCCEEEEEECCCHHHHH--hhCCCCce--e----CCHHHHhc------CCCCCEEEE
Confidence            3788999999986 44553445556755555565555432  34432222  1    24433332      357999999


Q ss_pred             CCCCHHHHHHHHHhcccCCEEEEEccCCCCccccch---H----hhhcCcEEEe--ecccCCcHHHHHHHHHcCCC
Q 017868          262 CAGLNKTMSTALGATCAGGKVCLVGMGHHEMTVPLT---P----AAVREVDVVG--VFRYKNTWPLCLELLRSGKI  328 (365)
Q Consensus       262 ~~g~~~~~~~~~~~l~~~G~~~~~g~~~~~~~~~~~---~----~~~~~~~i~~--~~~~~~~~~~~~~~l~~g~~  328 (365)
                      |+....+.+.+..++..+ +-+++.   .+......   .    .-.+++.+.-  ...+...++.+-+++++|.+
T Consensus        71 ~tp~~~H~~~~~~al~aG-khVl~E---KPla~t~~ea~~l~~~a~~~g~~l~v~~~~R~~p~~~~~k~~i~~g~i  142 (346)
T PRK11579         71 PTPNDTHFPLAKAALEAG-KHVVVD---KPFTVTLSQARELDALAKSAGRVLSVFHNRRWDSDFLTLKALLAEGVL  142 (346)
T ss_pred             cCCcHHHHHHHHHHHHCC-CeEEEe---CCCCCCHHHHHHHHHHHHHhCCEEEEEeeccCCHHHHHHHHHHhcCCC
Confidence            999888888888888764 445552   22111111   1    1123333322  22335678888899999877

>KOG1014 consensus 17 beta-hydroxysteroid dehydrogenase type 3, HSD17B3 [Lipid transport and metabolism]

Probab=93.79  E-value=0.62  Score=41.21  Aligned_cols=81  Identities=11%  Similarity=0.158  Sum_probs=54.0

Q ss_pred             CCCCEEEEEcC-CHHHHHHHHHHHHHCCCCeEEEEeCChhHHHH-----HHHcCC---CEEEeCCCCcccHHHHHHHHHH
Q 017868          180 GPETNVLIMGA-GPIGLVTMLGAPRAFGAPRIVIVDVDDYRLSV-----AKEIGA---DNIVKVSTNLQDIAEEVEKIQK  250 (365)
Q Consensus       180 ~~g~~vlI~G~-g~~G~~ai~~l~~~~g~~~vi~v~~~~~~~~~-----~~~~g~---~~~~~~~~~~~~~~~~i~~~~~  250 (365)
                      +-|++.+|+|+ .++|.+.+.-+|+ .|. +|+.+.++.+|++.     .++.++   ..++|+...+.++.+ +++...
T Consensus        47 ~~g~WAVVTGaTDGIGKayA~eLAk-rG~-nvvLIsRt~~KL~~v~kEI~~~~~vev~~i~~Dft~~~~~ye~-i~~~l~  123 (312)
T KOG1014|consen   47 KLGSWAVVTGATDGIGKAYARELAK-RGF-NVVLISRTQEKLEAVAKEIEEKYKVEVRIIAIDFTKGDEVYEK-LLEKLA  123 (312)
T ss_pred             hcCCEEEEECCCCcchHHHHHHHHH-cCC-EEEEEeCCHHHHHHHHHHHHHHhCcEEEEEEEecCCCchhHHH-HHHHhc
Confidence            45688999998 8899977765887 599 58899999998764     344452   223455444443443 333322


Q ss_pred             HhCCCceEEEeCCCC
Q 017868          251 AMGTGIDVSFDCAGL  265 (365)
Q Consensus       251 ~~~~~~d~vid~~g~  265 (365)
                        +-.+-+.++++|-
T Consensus       124 --~~~VgILVNNvG~  136 (312)
T KOG1014|consen  124 --GLDVGILVNNVGM  136 (312)
T ss_pred             --CCceEEEEecccc
Confidence              5678888998883

>PRK07097 gluconate 5-dehydrogenase; Provisional

Probab=93.72  E-value=0.94  Score=39.69  Aligned_cols=82  Identities=24%  Similarity=0.287  Sum_probs=47.6

Q ss_pred             CCCEEEEEcC-CHHHHHHHHHHHHHCCCCeEEEEeCChhHHHH----HHHcCCCE-EEeCCCC-cccHHHHHHHHHHHhC
Q 017868          181 PETNVLIMGA-GPIGLVTMLGAPRAFGAPRIVIVDVDDYRLSV----AKEIGADN-IVKVSTN-LQDIAEEVEKIQKAMG  253 (365)
Q Consensus       181 ~g~~vlI~G~-g~~G~~ai~~l~~~~g~~~vi~v~~~~~~~~~----~~~~g~~~-~~~~~~~-~~~~~~~i~~~~~~~~  253 (365)
                      .+.++||+|+ +++|..++..++ ..|++ ++.+++++++.+.    +++.+... .+..+-. .++....+.++.+. -
T Consensus         9 ~~k~~lItGa~~~iG~~ia~~l~-~~G~~-vv~~~~~~~~~~~~~~~~~~~~~~~~~~~~Dl~~~~~~~~~~~~~~~~-~   85 (265)
T PRK07097          9 KGKIALITGASYGIGFAIAKAYA-KAGAT-IVFNDINQELVDKGLAAYRELGIEAHGYVCDVTDEDGVQAMVSQIEKE-V   85 (265)
T ss_pred             CCCEEEEeCCCchHHHHHHHHHH-HCCCe-EEEEeCCHHHHHHHHHHHHhcCCceEEEEcCCCCHHHHHHHHHHHHHh-C
Confidence            5678999987 999999998555 56995 6666677655432    22334322 2222221 12222333333222 2


Q ss_pred             CCceEEEeCCCC
Q 017868          254 TGIDVSFDCAGL  265 (365)
Q Consensus       254 ~~~d~vid~~g~  265 (365)
                      +++|++|.+.|.
T Consensus        86 ~~id~li~~ag~   97 (265)
T PRK07097         86 GVIDILVNNAGI   97 (265)
T ss_pred             CCCCEEEECCCC
Confidence            579999998873

>PRK12825 fabG 3-ketoacyl-(acyl-carrier-protein) reductase; Provisional

Probab=93.71  E-value=0.63  Score=40.02  Aligned_cols=82  Identities=20%  Similarity=0.205  Sum_probs=45.5

Q ss_pred             CCCEEEEEcC-CHHHHHHHHHHHHHCCCCeEEEEeCChhHHHHH----HHcCCC-EEEeCCC-CcccHHHHHHHHHHHhC
Q 017868          181 PETNVLIMGA-GPIGLVTMLGAPRAFGAPRIVIVDVDDYRLSVA----KEIGAD-NIVKVST-NLQDIAEEVEKIQKAMG  253 (365)
Q Consensus       181 ~g~~vlI~G~-g~~G~~ai~~l~~~~g~~~vi~v~~~~~~~~~~----~~~g~~-~~~~~~~-~~~~~~~~i~~~~~~~~  253 (365)
                      +..++||+|+ |.+|..++. .+...|.++++.+.++++..+..    ...+.. ..+..+- +.+++.+.+.+..+. .
T Consensus         5 ~~~~vlItGasg~iG~~l~~-~l~~~g~~v~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~D~~~~~~v~~~~~~~~~~-~   82 (249)
T PRK12825          5 MGRVALVTGAARGLGRAIAL-RLARAGADVVVHYRSDEEAAEELVEAVEALGRRAQAVQADVTDKAALEAAVAAAVER-F   82 (249)
T ss_pred             CCCEEEEeCCCchHHHHHHH-HHHHCCCeEEEEeCCCHHHHHHHHHHHHhcCCceEEEECCcCCHHHHHHHHHHHHHH-c
Confidence            3468999987 999999999 44566886545454444433322    222322 1222222 222333333333221 3


Q ss_pred             CCceEEEeCCC
Q 017868          254 TGIDVSFDCAG  264 (365)
Q Consensus       254 ~~~d~vid~~g  264 (365)
                      .++|.+|.++|
T Consensus        83 ~~id~vi~~ag   93 (249)
T PRK12825         83 GRIDILVNNAG   93 (249)
T ss_pred             CCCCEEEECCc
Confidence            57999999887

>PRK06484 short chain dehydrogenase; Validated

Probab=93.70  E-value=0.69  Score=45.10  Aligned_cols=82  Identities=27%  Similarity=0.379  Sum_probs=51.7

Q ss_pred             CCCEEEEEcC-CHHHHHHHHHHHHHCCCCeEEEEeCChhHHH-HHHHcCCCE-EEeCCC-CcccHHHHHHHHHHHhCCCc
Q 017868          181 PETNVLIMGA-GPIGLVTMLGAPRAFGAPRIVIVDVDDYRLS-VAKEIGADN-IVKVST-NLQDIAEEVEKIQKAMGTGI  256 (365)
Q Consensus       181 ~g~~vlI~G~-g~~G~~ai~~l~~~~g~~~vi~v~~~~~~~~-~~~~~g~~~-~~~~~~-~~~~~~~~i~~~~~~~~~~~  256 (365)
                      .+.++||+|+ +++|.++++.+ ...|+ +|+.++++.++.+ ..++++... .+..+- +.+++...+.++.+. .+++
T Consensus         4 ~~k~~lITGas~gIG~aia~~l-~~~G~-~V~~~~r~~~~~~~~~~~~~~~~~~~~~D~~~~~~~~~~~~~~~~~-~g~i   80 (520)
T PRK06484          4 QSRVVLVTGAAGGIGRAACQRF-ARAGD-QVVVADRNVERARERADSLGPDHHALAMDVSDEAQIREGFEQLHRE-FGRI   80 (520)
T ss_pred             CCeEEEEECCCcHHHHHHHHHH-HHCCC-EEEEEeCCHHHHHHHHHHhCCceeEEEeccCCHHHHHHHHHHHHHH-hCCC
Confidence            5788999987 99999999955 45698 5777777777654 445565422 122221 223444444444332 3579


Q ss_pred             eEEEeCCCC
Q 017868          257 DVSFDCAGL  265 (365)
Q Consensus       257 d~vid~~g~  265 (365)
                      |++|.+.|.
T Consensus        81 D~li~nag~   89 (520)
T PRK06484         81 DVLVNNAGV   89 (520)
T ss_pred             CEEEECCCc
Confidence            999998774

>PRK12937 short chain dehydrogenase; Provisional

Probab=93.66  E-value=0.79  Score=39.47  Aligned_cols=83  Identities=18%  Similarity=0.141  Sum_probs=45.6

Q ss_pred             CCCEEEEEcC-CHHHHHHHHHHHHHCCCCeEEEEeCChhHHH----HHHHcCCC-EEEeCCC-CcccHHHHHHHHHHHhC
Q 017868          181 PETNVLIMGA-GPIGLVTMLGAPRAFGAPRIVIVDVDDYRLS----VAKEIGAD-NIVKVST-NLQDIAEEVEKIQKAMG  253 (365)
Q Consensus       181 ~g~~vlI~G~-g~~G~~ai~~l~~~~g~~~vi~v~~~~~~~~----~~~~~g~~-~~~~~~~-~~~~~~~~i~~~~~~~~  253 (365)
                      ++.++||+|+ |++|..++..+ ...|+++++...+++.+.+    .+++.+.. ..+..+- +.+++.+.+++..+. -
T Consensus         4 ~~~~vlItG~~~~iG~~la~~l-~~~g~~v~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~Dl~~~~~~~~~~~~~~~~-~   81 (245)
T PRK12937          4 SNKVAIVTGASRGIGAAIARRL-AADGFAVAVNYAGSAAAADELVAEIEAAGGRAIAVQADVADAAAVTRLFDAAETA-F   81 (245)
T ss_pred             CCCEEEEeCCCchHHHHHHHHH-HHCCCEEEEecCCCHHHHHHHHHHHHhcCCeEEEEECCCCCHHHHHHHHHHHHHH-c
Confidence            4678999987 99999999945 4569854444433333222    22333422 1222221 222333334433332 3


Q ss_pred             CCceEEEeCCCC
Q 017868          254 TGIDVSFDCAGL  265 (365)
Q Consensus       254 ~~~d~vid~~g~  265 (365)
                      +++|++|.+.|.
T Consensus        82 ~~id~vi~~ag~   93 (245)
T PRK12937         82 GRIDVLVNNAGV   93 (245)
T ss_pred             CCCCEEEECCCC
Confidence            579999998873

>TIGR00715 precor6x_red precorrin-6x reductase

Probab=93.66  E-value=0.26  Score=43.04  Aligned_cols=74  Identities=19%  Similarity=0.113  Sum_probs=49.0

Q ss_pred             EEEEEcCCHHHHHHHHHHHHHCCCCeEEEEeCChhHHHHHHHcCCCEEEeCCCCcccHHHHHHHHHHHhCCCceEEEeCC
Q 017868          184 NVLIMGAGPIGLVTMLGAPRAFGAPRIVIVDVDDYRLSVAKEIGADNIVKVSTNLQDIAEEVEKIQKAMGTGIDVSFDCA  263 (365)
Q Consensus       184 ~vlI~G~g~~G~~ai~~l~~~~g~~~vi~v~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~i~~~~~~~~~~~d~vid~~  263 (365)
                      +|||.|+++-|..++. .+...|. .|++..+++.+.+.+.+.|...++.-.   .+-.+ ++++..  ..++|+|||++
T Consensus         2 ~ILvlGGT~egr~la~-~L~~~g~-~v~~s~~t~~~~~~~~~~g~~~v~~g~---l~~~~-l~~~l~--~~~i~~VIDAt   73 (256)
T TIGR00715         2 TVLLMGGTVDSRAIAK-GLIAQGI-EILVTVTTSEGKHLYPIHQALTVHTGA---LDPQE-LREFLK--RHSIDILVDAT   73 (256)
T ss_pred             eEEEEechHHHHHHHH-HHHhCCC-eEEEEEccCCccccccccCCceEEECC---CCHHH-HHHHHH--hcCCCEEEEcC
Confidence            6899988556998887 4445687 466666777777777776665555322   22222 444433  57899999998


Q ss_pred             CC
Q 017868          264 GL  265 (365)
Q Consensus       264 g~  265 (365)
                      ..
T Consensus        74 HP   75 (256)
T TIGR00715        74 HP   75 (256)
T ss_pred             CH
Confidence            83

This enzyme was found to be a monomer by gel filtration.

>PRK00121 trmB tRNA (guanine-N(7)-)-methyltransferase; Reviewed

Probab=93.64  E-value=1  Score=37.90  Aligned_cols=98  Identities=14%  Similarity=0.116  Sum_probs=60.5

Q ss_pred             CCCEEEEEcCCHHHHHHHHHHHHHCCCCeEEEEeCChhHHHHHHH----cCCCEEEeCCCCcccHHHHHHHHHHHhCCCc
Q 017868          181 PETNVLIMGAGPIGLVTMLGAPRAFGAPRIVIVDVDDYRLSVAKE----IGADNIVKVSTNLQDIAEEVEKIQKAMGTGI  256 (365)
Q Consensus       181 ~g~~vlI~G~g~~G~~ai~~l~~~~g~~~vi~v~~~~~~~~~~~~----~g~~~~~~~~~~~~~~~~~i~~~~~~~~~~~  256 (365)
                      ++.+||-.|+|. |..+.. +++......+++++.+++..+.+++    .+...+.....   +..+.+...  .....+
T Consensus        40 ~~~~VLDiGcGt-G~~~~~-la~~~p~~~v~gVD~s~~~i~~a~~~~~~~~~~~v~~~~~---d~~~~l~~~--~~~~~~  112 (202)
T PRK00121         40 DAPIHLEIGFGK-GEFLVE-MAKANPDINFIGIEVHEPGVGKALKKIEEEGLTNLRLLCG---DAVEVLLDM--FPDGSL  112 (202)
T ss_pred             CCCeEEEEccCC-CHHHHH-HHHHCCCccEEEEEechHHHHHHHHHHHHcCCCCEEEEec---CHHHHHHHH--cCcccc
Confidence            667888888865 666667 6655544579999999988776643    23332222112   221222211  114568


Q ss_pred             eEEEeCCC--------------CHHHHHHHHHhcccCCEEEEE
Q 017868          257 DVSFDCAG--------------LNKTMSTALGATCAGGKVCLV  285 (365)
Q Consensus       257 d~vid~~g--------------~~~~~~~~~~~l~~~G~~~~~  285 (365)
                      |.|+-...              ....+..+.+.|+++|.+++.
T Consensus       113 D~V~~~~~~p~~~~~~~~~~~~~~~~l~~i~~~LkpgG~l~i~  155 (202)
T PRK00121        113 DRIYLNFPDPWPKKRHHKRRLVQPEFLALYARKLKPGGEIHFA  155 (202)
T ss_pred             ceEEEECCCCCCCccccccccCCHHHHHHHHHHcCCCCEEEEE
Confidence            88875322              134677889999999999876

>TIGR02371 ala_DH_arch alanine dehydrogenase, Archaeoglobus fulgidus type

Probab=93.63  E-value=1.9  Score=39.26  Aligned_cols=101  Identities=15%  Similarity=0.161  Sum_probs=64.8

Q ss_pred             HhcCCCCCCEEEEEcCCHHHHHHHHHHHHHCCCCeEEEEeCChhHHH-HHH---HcCCCEEEeCCCCcccHHHHHHHHHH
Q 017868          175 RRANIGPETNVLIMGAGPIGLVTMLGAPRAFGAPRIVIVDVDDYRLS-VAK---EIGADNIVKVSTNLQDIAEEVEKIQK  250 (365)
Q Consensus       175 ~~~~~~~g~~vlI~G~g~~G~~ai~~l~~~~g~~~vi~v~~~~~~~~-~~~---~~g~~~~~~~~~~~~~~~~~i~~~~~  250 (365)
                      +...-+...++.|.|+|..|.+.+..++.....+.+.+.+++.++.+ +++   ++|.. +...    .+..+.+     
T Consensus       121 ~~La~~~~~~lgiiG~G~qA~~~l~al~~~~~~~~v~V~~r~~~~~~~~~~~~~~~g~~-v~~~----~~~~eav-----  190 (325)
T TIGR02371       121 KYLARKDSSVLGIIGAGRQAWTQLEALSRVFDLEEVSVYCRTPSTREKFALRASDYEVP-VRAA----TDPREAV-----  190 (325)
T ss_pred             HHhCCCCCCEEEEECCCHHHHHHHHHHHhcCCCCEEEEECCCHHHHHHHHHHHHhhCCc-EEEe----CCHHHHh-----
Confidence            43333455788999999999987775556677888999999988865 333   33432 1111    1222222     


Q ss_pred             HhCCCceEEEeCCCCHHHHHHHHHhcccCCEEEEEccCC
Q 017868          251 AMGTGIDVSFDCAGLNKTMSTALGATCAGGKVCLVGMGH  289 (365)
Q Consensus       251 ~~~~~~d~vid~~g~~~~~~~~~~~l~~~G~~~~~g~~~  289 (365)
                         .+.|+|+-|+.+...+ .....++++-+++.+|...
T Consensus       191 ---~~aDiVitaT~s~~P~-~~~~~l~~g~~v~~vGs~~  225 (325)
T TIGR02371       191 ---EGCDILVTTTPSRKPV-VKADWVSEGTHINAIGADA  225 (325)
T ss_pred             ---ccCCEEEEecCCCCcE-ecHHHcCCCCEEEecCCCC
Confidence               4789999988654211 2345789999998888543

This enzyme, a homolog of bacterial ornithine cyclodeaminases and marsupial mu-crystallins, is a homodimeric, NAD-dependent alanine dehydrogenase found in Archaeoglobus fulgidus and several other Archaea. For a number of close homologs, scoring between trusted and noise cutoffs, it is not clear at present what is the enzymatic activity.

>PF01564 Spermine_synth: Spermine/spermidine synthase; InterPro: IPR001045 Synonym(s): Spermidine aminopropyltransferase A group of polyamine biosynthetic enzymes involved in the fifth (last) step in the biosynthesis of spermidine from arginine and methionine which includes; spermidine synthase (2

Probab=93.63  E-value=0.45  Score=41.36  Aligned_cols=95  Identities=18%  Similarity=0.174  Sum_probs=60.5

Q ss_pred             CCCEEEEEcCCHHHHHHHHHHHHHCCCCeEEEEeCChhHHHHHHHcCC---------C-EEEeCCCCcccHHHHHHHHHH
Q 017868          181 PETNVLIMGAGPIGLVTMLGAPRAFGAPRIVIVDVDDYRLSVAKEIGA---------D-NIVKVSTNLQDIAEEVEKIQK  250 (365)
Q Consensus       181 ~g~~vlI~G~g~~G~~ai~~l~~~~g~~~vi~v~~~~~~~~~~~~~g~---------~-~~~~~~~~~~~~~~~i~~~~~  250 (365)
                      +.++|||.|+|. |..+-+ +++....+.+.+|+-+++-.+.++++-.         . .++.     .|-...+++   
T Consensus        76 ~p~~VLiiGgG~-G~~~~e-ll~~~~~~~i~~VEiD~~Vv~~a~~~f~~~~~~~~d~r~~i~~-----~Dg~~~l~~---  145 (246)
T PF01564_consen   76 NPKRVLIIGGGD-GGTARE-LLKHPPVESITVVEIDPEVVELARKYFPEFSEGLDDPRVRIII-----GDGRKFLKE---  145 (246)
T ss_dssp             ST-EEEEEESTT-SHHHHH-HTTSTT-SEEEEEES-HHHHHHHHHHTHHHHTTGGSTTEEEEE-----STHHHHHHT---
T ss_pred             CcCceEEEcCCC-hhhhhh-hhhcCCcceEEEEecChHHHHHHHHhchhhccccCCCceEEEE-----hhhHHHHHh---
Confidence            678999998654 445556 6666667789999999998888877421         1 1222     233333333   


Q ss_pred             HhCC-CceEEE-eCCC---------CHHHHHHHHHhcccCCEEEEEc
Q 017868          251 AMGT-GIDVSF-DCAG---------LNKTMSTALGATCAGGKVCLVG  286 (365)
Q Consensus       251 ~~~~-~~d~vi-d~~g---------~~~~~~~~~~~l~~~G~~~~~g  286 (365)
                       ... .+|+|+ |...         +.+-++.+.++|+++|.++...
T Consensus       146 -~~~~~yDvIi~D~~dp~~~~~~l~t~ef~~~~~~~L~~~Gv~v~~~  191 (246)
T PF01564_consen  146 -TQEEKYDVIIVDLTDPDGPAPNLFTREFYQLCKRRLKPDGVLVLQA  191 (246)
T ss_dssp             -SSST-EEEEEEESSSTTSCGGGGSSHHHHHHHHHHEEEEEEEEEEE
T ss_pred             -ccCCcccEEEEeCCCCCCCcccccCHHHHHHHHhhcCCCcEEEEEc
Confidence             234 899997 4433         2356778889999999998865

5.1.16 from EC), spermine synthase (2.5.1.22 from EC) and putrescine N-methyltransferase (2.1.1.53 from EC) []. The Thermotoga maritima spermidine synthase monomer consists of two domains: an N-terminal domain composed of six beta-strands, and a Rossmann-like C- terminal domain []. The larger C-terminal catalytic core domain consists of a seven-stranded beta-sheet flanked by nine alpha helices. This domain resembles a topology observed in a number of nucleotide and dinucleotide-binding enzymes, and in S-adenosyl-L-methionine (AdoMet)- dependent methyltransferase (MTases) [].; GO: 0003824 catalytic activity; PDB: 2E5W_C 2ZSU_E 2O0L_B 2O05_B 2O06_B 2O07_B 3RW9_B 2PWP_A 2HTE_B 3RIE_B ....

>PF02254 TrkA_N: TrkA-N domain; InterPro: IPR003148 The regulator of K+ conductance (RCK) domain is found in many ligand-gated K+ channels, most often attached to the intracellular carboxy terminus

Probab=93.63  E-value=2.3  Score=31.85  Aligned_cols=92  Identities=18%  Similarity=0.155  Sum_probs=58.4

Q ss_pred             EEEEcCCHHHHHHHHHHHHHCCCCeEEEEeCChhHHHHHHHcCCCEEEeCCCCcccHHHHHHHHHHHhCCCceEEEeCCC
Q 017868          185 VLIMGAGPIGLVTMLGAPRAFGAPRIVIVDVDDYRLSVAKEIGADNIVKVSTNLQDIAEEVEKIQKAMGTGIDVSFDCAG  264 (365)
Q Consensus       185 vlI~G~g~~G~~ai~~l~~~~g~~~vi~v~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~i~~~~~~~~~~~d~vid~~g  264 (365)
                      |+|.|.|.+|..+++ .++..+. .+++++.++++.+.+++.|.. ++.-+..++   +.+++   ..-..++.++-+++
T Consensus         1 vvI~G~g~~~~~i~~-~L~~~~~-~vvvid~d~~~~~~~~~~~~~-~i~gd~~~~---~~l~~---a~i~~a~~vv~~~~   71 (116)
T PF02254_consen    1 VVIIGYGRIGREIAE-QLKEGGI-DVVVIDRDPERVEELREEGVE-VIYGDATDP---EVLER---AGIEKADAVVILTD   71 (116)
T ss_dssp             EEEES-SHHHHHHHH-HHHHTTS-EEEEEESSHHHHHHHHHTTSE-EEES-TTSH---HHHHH---TTGGCESEEEEESS
T ss_pred             eEEEcCCHHHHHHHH-HHHhCCC-EEEEEECCcHHHHHHHhcccc-cccccchhh---hHHhh---cCccccCEEEEccC
Confidence            578899999999999 5556554 789999999999999888854 443222222   22322   22357888888877


Q ss_pred             CHHHHH---HHHHhcccCCEEEEE
Q 017868          265 LNKTMS---TALGATCAGGKVCLV  285 (365)
Q Consensus       265 ~~~~~~---~~~~~l~~~G~~~~~  285 (365)
                      ....-.   ...+.+.+..+++..
T Consensus        72 ~d~~n~~~~~~~r~~~~~~~ii~~   95 (116)
T PF02254_consen   72 DDEENLLIALLARELNPDIRIIAR   95 (116)
T ss_dssp             SHHHHHHHHHHHHHHTTTSEEEEE
T ss_pred             CHHHHHHHHHHHHHHCCCCeEEEE
Confidence            643211   233445566666654

The domain is prevalent among prokaryotic K+ channels, and also found in eukaryotic, high-conductance Ca2+-activated K+ channels (BK channels) [, , ]. Largely involved in redox-linked regulation of potassium channels, the N-terminal part of the RCK domain is predicted to be an active dehydrogenase at least in some cases []. Some have a conserved sequence motif (G-x-G-x-x-G-x(n)-[DE]) for NAD+ binding [], but others do not, reflecting the diversity of ligands for RCK domains. The C-terminal part is less conserved, being absent in some channels, such as the kefC antiporter from Escherichia coli. It is predicted to bind unidentified ligands and to regulate sulphate, sodium and other transporters. The X-ray structure of several RCK domains has been solved [, , ]. It reveals an alpha-beta fold similar to dehydrogenase enzymes. The domain forms a homodimer, producing a cleft between two lobes. It has a composite structure, with an N-terminal (RCK-N), and a C-terminal (RCK-C) subdomain. The RCK-N subdomain forms a Rossmann fold with two alpha helices on one side of a six stranded parallel beta sheet and three alpha helices on the other side. The RCK-C subdomain is an all-beta-strand fold. It forms an extention of the dimer interface and further stabilises the RCK homodimer [, , ]. Ca2+ is a ligand that opens the channel in a concentration-dependent manner. Two Ca2+ ions are located at the base of a cleft between two RCK domains, coordinated by the carboxylate groups of two glutamate residues, and by an aspartate residue [, , ]. RCK domains occur in at least five different contexts: As a single domain on the C terminus of some K+ channels (for example, many prokaryotic K+ channels). As two tandem RCK domains on the C terminus of some transporters that form gating rings (for example, eukaryotic BK channels). The gating ring has an arrangement of eight identical RCK domains, one from each of the four pore-forming subunits and four from the intracellular solution. As two domains, one at the N terminus and another at the C terminus of transporter (for example, the prokaryotic trk system potassium uptake protein A). As a soluble protein (not part of a K+ channel) consisting of two tandem RCK domains. As a soluble protein consisting of a single RCK domain. This entry represents the N-terminal subdomain of RCK.; GO: 0006813 potassium ion transport; PDB: 3L4B_E 1LSS_C 3LLV_A 2FY8_D 2AEF_A 1LNQ_E 3RBX_C 3KXD_A 2AEJ_A 3RBZ_A ....

>PRK07574 formate dehydrogenase; Provisional

Probab=93.63  E-value=0.71  Score=42.92  Aligned_cols=90  Identities=20%  Similarity=0.232  Sum_probs=57.0

Q ss_pred             CCCEEEEEcCCHHHHHHHHHHHHHCCCCeEEEEeCChhHHHHHHHcCCCEEEeCCCCcccHHHHHHHHHHHhCCCceEEE
Q 017868          181 PETNVLIMGAGPIGLVTMLGAPRAFGAPRIVIVDVDDYRLSVAKEIGADNIVKVSTNLQDIAEEVEKIQKAMGTGIDVSF  260 (365)
Q Consensus       181 ~g~~vlI~G~g~~G~~ai~~l~~~~g~~~vi~v~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~i~~~~~~~~~~~d~vi  260 (365)
                      .|.+|.|+|.|.+|+.+++ .++.+|. .|.+.++.....+..+.+++...       .++    .++.    ...|+|+
T Consensus       191 ~gktVGIvG~G~IG~~vA~-~l~~fG~-~V~~~dr~~~~~~~~~~~g~~~~-------~~l----~ell----~~aDvV~  253 (385)
T PRK07574        191 EGMTVGIVGAGRIGLAVLR-RLKPFDV-KLHYTDRHRLPEEVEQELGLTYH-------VSF----DSLV----SVCDVVT  253 (385)
T ss_pred             CCCEEEEECCCHHHHHHHH-HHHhCCC-EEEEECCCCCchhhHhhcCceec-------CCH----HHHh----hcCCEEE
Confidence            5678999999999999999 7789999 67888776544444444553210       122    2221    3568887


Q ss_pred             eCCCCHHHHH-----HHHHhcccCCEEEEEcc
Q 017868          261 DCAGLNKTMS-----TALGATCAGGKVCLVGM  287 (365)
Q Consensus       261 d~~g~~~~~~-----~~~~~l~~~G~~~~~g~  287 (365)
                      -+........     ..+..|+++..++.++.
T Consensus       254 l~lPlt~~T~~li~~~~l~~mk~ga~lIN~aR  285 (385)
T PRK07574        254 IHCPLHPETEHLFDADVLSRMKRGSYLVNTAR  285 (385)
T ss_pred             EcCCCCHHHHHHhCHHHHhcCCCCcEEEECCC
Confidence            7665322221     35667777776666653

>PRK08594 enoyl-(acyl carrier protein) reductase; Provisional

Probab=93.60  E-value=0.7  Score=40.41  Aligned_cols=81  Identities=16%  Similarity=0.220  Sum_probs=45.6

Q ss_pred             CCCEEEEEcC---CHHHHHHHHHHHHHCCCCeEEEEeCCh---hHH-HHHHHcCCCE--EEeCC-CCcccHHHHHHHHHH
Q 017868          181 PETNVLIMGA---GPIGLVTMLGAPRAFGAPRIVIVDVDD---YRL-SVAKEIGADN--IVKVS-TNLQDIAEEVEKIQK  250 (365)
Q Consensus       181 ~g~~vlI~G~---g~~G~~ai~~l~~~~g~~~vi~v~~~~---~~~-~~~~~~g~~~--~~~~~-~~~~~~~~~i~~~~~  250 (365)
                      .+.++||+|+   +++|.++++.++ ..|++ |+.+.+++   ++. ++.+++....  .+..+ .+.++....++++.+
T Consensus         6 ~~k~~lItGa~~s~GIG~aia~~la-~~G~~-v~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~Dv~d~~~v~~~~~~~~~   83 (257)
T PRK08594          6 EGKTYVVMGVANKRSIAWGIARSLH-NAGAK-LVFTYAGERLEKEVRELADTLEGQESLLLPCDVTSDEEITACFETIKE   83 (257)
T ss_pred             CCCEEEEECCCCCCCHHHHHHHHHH-HCCCE-EEEecCcccchHHHHHHHHHcCCCceEEEecCCCCHHHHHHHHHHHHH
Confidence            4678999986   499999999565 56995 55554432   233 2334442111  12222 122334344444433


Q ss_pred             HhCCCceEEEeCCC
Q 017868          251 AMGTGIDVSFDCAG  264 (365)
Q Consensus       251 ~~~~~~d~vid~~g  264 (365)
                      . -+++|+++.++|
T Consensus        84 ~-~g~ld~lv~nag   96 (257)
T PRK08594         84 E-VGVIHGVAHCIA   96 (257)
T ss_pred             h-CCCccEEEECcc
Confidence            2 257999998876

>cd01078 NAD_bind_H4MPT_DH NADP binding domain of methylene tetrahydromethanopterin dehydrogenase

Probab=93.60  E-value=1.2  Score=37.08  Aligned_cols=76  Identities=28%  Similarity=0.386  Sum_probs=45.6

Q ss_pred             CCCEEEEEcC-CHHHHHHHHHHHHHCCCCeEEEEeCChhHHHHH-HHc----CCCEEEeCCCCcccHHHHHHHHHHHhCC
Q 017868          181 PETNVLIMGA-GPIGLVTMLGAPRAFGAPRIVIVDVDDYRLSVA-KEI----GADNIVKVSTNLQDIAEEVEKIQKAMGT  254 (365)
Q Consensus       181 ~g~~vlI~G~-g~~G~~ai~~l~~~~g~~~vi~v~~~~~~~~~~-~~~----g~~~~~~~~~~~~~~~~~i~~~~~~~~~  254 (365)
                      ++.+++|.|+ |.+|..++..++ ..|. .++.+.++.++.+.+ +.+    +.. +...+.  .+.. .+.+..    .
T Consensus        27 ~~~~vlVlGgtG~iG~~~a~~l~-~~g~-~V~l~~R~~~~~~~l~~~l~~~~~~~-~~~~~~--~~~~-~~~~~~----~   96 (194)
T cd01078          27 KGKTAVVLGGTGPVGQRAAVLLA-REGA-RVVLVGRDLERAQKAADSLRARFGEG-VGAVET--SDDA-ARAAAI----K   96 (194)
T ss_pred             CCCEEEEECCCCHHHHHHHHHHH-HCCC-EEEEEcCCHHHHHHHHHHHHhhcCCc-EEEeeC--CCHH-HHHHHH----h
Confidence            5679999987 999998888454 5687 677777777765433 333    222 111111  1221 222221    4


Q ss_pred             CceEEEeCCCCH
Q 017868          255 GIDVSFDCAGLN  266 (365)
Q Consensus       255 ~~d~vid~~g~~  266 (365)
                      ++|+||.++...
T Consensus        97 ~~diVi~at~~g  108 (194)
T cd01078          97 GADVVFAAGAAG  108 (194)
T ss_pred             cCCEEEECCCCC
Confidence            689999988754

Methylene Tetrahydromethanopterin Dehydrogenase (H4MPT DH) NADP binding domain. NADP-dependent H4MPT DH catalyzes the dehydrogenation of methylene- H4MPT and methylene-tetrahydrofolate (H4F) with NADP+ as cofactor. H4F and H4MPT are both cofactors that carry the one-carbon units between the formyl and methyl oxidation level. H4F and H4MPT are structurally analogous to each other with respect to the pterin moiety, but each has distinct side chain. H4MPT is present only in anaerobic methanogenic archaea and aerobic methylotrophic proteobacteria. H4MPT seems to have evolved independently from H4F and functions as a distinct carrier in C1 metabolism. Amino acid DH-like NAD(P)-binding domains are members of the Rossmann fold superfamily and include glutamate, leucine, and phenylalanine DHs, methylene tetrahydrofolate DH, methylene-tetrahydromethanopterin DH, methylene-tetrahydropholate DH/cyclo

>PRK11188 rrmJ 23S rRNA methyltransferase J; Provisional

Probab=93.59  E-value=1.2  Score=37.76  Aligned_cols=98  Identities=15%  Similarity=0.205  Sum_probs=54.4

Q ss_pred             CCCCCEEEEEcCCHHHHHHHHHHHHHCCC-CeEEEEeCChhHHHHHHHcCCCEEEeCCCCcccHHHHHHHHHHHhCCCce
Q 017868          179 IGPETNVLIMGAGPIGLVTMLGAPRAFGA-PRIVIVDVDDYRLSVAKEIGADNIVKVSTNLQDIAEEVEKIQKAMGTGID  257 (365)
Q Consensus       179 ~~~g~~vlI~G~g~~G~~ai~~l~~~~g~-~~vi~v~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~i~~~~~~~~~~~d  257 (365)
                      ++++++||=.|+|+ |..+.. +++..+. ..|++++.++..     .+.-..++.-+-.+......+.+..  ....+|
T Consensus        49 ~~~~~~VLDlG~Gt-G~~t~~-l~~~~~~~~~V~aVDi~~~~-----~~~~v~~i~~D~~~~~~~~~i~~~~--~~~~~D  119 (209)
T PRK11188         49 FKPGMTVVDLGAAP-GGWSQY-AVTQIGDKGRVIACDILPMD-----PIVGVDFLQGDFRDELVLKALLERV--GDSKVQ  119 (209)
T ss_pred             CCCCCEEEEEcccC-CHHHHH-HHHHcCCCceEEEEeccccc-----CCCCcEEEecCCCChHHHHHHHHHh--CCCCCC
Confidence            57888888888754 444444 4445443 379999987621     1111122221111111122232221  256899


Q ss_pred             EEEeCC-----CC------------HHHHHHHHHhcccCCEEEEE
Q 017868          258 VSFDCA-----GL------------NKTMSTALGATCAGGKVCLV  285 (365)
Q Consensus       258 ~vid~~-----g~------------~~~~~~~~~~l~~~G~~~~~  285 (365)
                      +|+...     |.            ...+..+.+.|+++|.++..
T Consensus       120 ~V~S~~~~~~~g~~~~d~~~~~~~~~~~L~~~~~~LkpGG~~vi~  164 (209)
T PRK11188        120 VVMSDMAPNMSGTPAVDIPRAMYLVELALDMCRDVLAPGGSFVVK  164 (209)
T ss_pred             EEecCCCCccCCChHHHHHHHHHHHHHHHHHHHHHcCCCCEEEEE
Confidence            999743     22            12456788899999999874

>PRK03612 spermidine synthase; Provisional

Probab=93.56  E-value=0.53  Score=45.83  Aligned_cols=98  Identities=16%  Similarity=0.167  Sum_probs=61.6

Q ss_pred             CCCCEEEEEcCCHHHHHHHHHHHHHCCCCeEEEEeCChhHHHHHHHcC-C----------CEEEeCCCCcccHHHHHHHH
Q 017868          180 GPETNVLIMGAGPIGLVTMLGAPRAFGAPRIVIVDVDDYRLSVAKEIG-A----------DNIVKVSTNLQDIAEEVEKI  248 (365)
Q Consensus       180 ~~g~~vlI~G~g~~G~~ai~~l~~~~g~~~vi~v~~~~~~~~~~~~~g-~----------~~~~~~~~~~~~~~~~i~~~  248 (365)
                      ++.++||+.|+|. |..+.. +++....+++..++.+++-.+.+++.. .          +.+....   .|..+.+++ 
T Consensus       296 ~~~~rVL~IG~G~-G~~~~~-ll~~~~v~~v~~VEid~~vi~~ar~~~~l~~~~~~~~~dprv~vi~---~Da~~~l~~-  369 (521)
T PRK03612        296 ARPRRVLVLGGGD-GLALRE-VLKYPDVEQVTLVDLDPAMTELARTSPALRALNGGALDDPRVTVVN---DDAFNWLRK-  369 (521)
T ss_pred             CCCCeEEEEcCCc-cHHHHH-HHhCCCcCeEEEEECCHHHHHHHHhCCcchhhhccccCCCceEEEE---ChHHHHHHh-
Confidence            4567999998753 556666 555544468999999999999887721 1          1111111   232222322 


Q ss_pred             HHHhCCCceEEEeCCCCH-----------HHHHHHHHhcccCCEEEEEc
Q 017868          249 QKAMGTGIDVSFDCAGLN-----------KTMSTALGATCAGGKVCLVG  286 (365)
Q Consensus       249 ~~~~~~~~d~vid~~g~~-----------~~~~~~~~~l~~~G~~~~~g  286 (365)
                         ..+++|+|+-....+           +.++.+.++|+++|.++...
T Consensus       370 ---~~~~fDvIi~D~~~~~~~~~~~L~t~ef~~~~~~~L~pgG~lv~~~  415 (521)
T PRK03612        370 ---LAEKFDVIIVDLPDPSNPALGKLYSVEFYRLLKRRLAPDGLLVVQS  415 (521)
T ss_pred             ---CCCCCCEEEEeCCCCCCcchhccchHHHHHHHHHhcCCCeEEEEec
Confidence               256899997643211           24567888999999988764

>COG4122 Predicted O-methyltransferase [General function prediction only]

Probab=93.55  E-value=2.2  Score=36.17  Aligned_cols=104  Identities=20%  Similarity=0.322  Sum_probs=65.9

Q ss_pred             cCCCCCCEEEEEcCCHHHHHHHHHHHHHCC-CCeEEEEeCChhHHHHH----HHcCCCEEEeCCCCcccHHHHHHHHHHH
Q 017868          177 ANIGPETNVLIMGAGPIGLVTMLGAPRAFG-APRIVIVDVDDYRLSVA----KEIGADNIVKVSTNLQDIAEEVEKIQKA  251 (365)
Q Consensus       177 ~~~~~g~~vlI~G~g~~G~~ai~~l~~~~g-~~~vi~v~~~~~~~~~~----~~~g~~~~~~~~~~~~~~~~~i~~~~~~  251 (365)
                      .+.+...+||=.|.+ +|..++. +|..+. -.++++++.++++.+.+    ++.|....+..-.. .+..+.+.+   .
T Consensus        55 ~~~~~~k~iLEiGT~-~GySal~-mA~~l~~~g~l~tiE~~~e~~~~A~~n~~~ag~~~~i~~~~~-gdal~~l~~---~  128 (219)
T COG4122          55 ARLSGPKRILEIGTA-IGYSALW-MALALPDDGRLTTIERDEERAEIARENLAEAGVDDRIELLLG-GDALDVLSR---L  128 (219)
T ss_pred             HHhcCCceEEEeecc-cCHHHHH-HHhhCCCCCeEEEEeCCHHHHHHHHHHHHHcCCcceEEEEec-CcHHHHHHh---c
Confidence            455677888888852 2444455 444544 33799999999987655    44576653322111 244444443   2


Q ss_pred             hCCCceEEEeCCC---CHHHHHHHHHhcccCCEEEEEc
Q 017868          252 MGTGIDVSFDCAG---LNKTMSTALGATCAGGKVCLVG  286 (365)
Q Consensus       252 ~~~~~d~vid~~g---~~~~~~~~~~~l~~~G~~~~~g  286 (365)
                      ..+.+|+||-=..   -+..++.+++.|++||.++.-.
T Consensus       129 ~~~~fDliFIDadK~~yp~~le~~~~lLr~GGliv~DN  166 (219)
T COG4122         129 LDGSFDLVFIDADKADYPEYLERALPLLRPGGLIVADN  166 (219)
T ss_pred             cCCCccEEEEeCChhhCHHHHHHHHHHhCCCcEEEEee
Confidence            3578999975333   2457778999999999988754

>PRK06823 ornithine cyclodeaminase; Validated

Probab=93.54  E-value=2.9  Score=37.85  Aligned_cols=103  Identities=10%  Similarity=0.108  Sum_probs=67.8

Q ss_pred             HHhcCCCCCCEEEEEcCCHHHHHHHHHHHHHCCCCeEEEEeCChhHHH-HHH---HcCCCEEEeCCCCcccHHHHHHHHH
Q 017868          174 CRRANIGPETNVLIMGAGPIGLVTMLGAPRAFGAPRIVIVDVDDYRLS-VAK---EIGADNIVKVSTNLQDIAEEVEKIQ  249 (365)
Q Consensus       174 ~~~~~~~~g~~vlI~G~g~~G~~ai~~l~~~~g~~~vi~v~~~~~~~~-~~~---~~g~~~~~~~~~~~~~~~~~i~~~~  249 (365)
                      .+...-+.-.++.|.|+|..+...++.++.....+.|.+.+++.++.+ +++   +.+..... .    .+.    ++. 
T Consensus       120 ~~~La~~d~~~l~iiG~G~qA~~~~~a~~~v~~i~~v~v~~r~~~~a~~~~~~~~~~~~~v~~-~----~~~----~~a-  189 (315)
T PRK06823        120 ARLLAPQHVSAIGIVGTGIQARMQLMYLKNVTDCRQLWVWGRSETALEEYRQYAQALGFAVNT-T----LDA----AEV-  189 (315)
T ss_pred             HHHhcCCCCCEEEEECCcHHHHHHHHHHHhcCCCCEEEEECCCHHHHHHHHHHHHhcCCcEEE-E----CCH----HHH-
Confidence            343333455788889999999988887777788999999999988865 333   23433221 1    122    222 


Q ss_pred             HHhCCCceEEEeCCCCHHHHHHHHHhcccCCEEEEEccCCC
Q 017868          250 KAMGTGIDVSFDCAGLNKTMSTALGATCAGGKVCLVGMGHH  290 (365)
Q Consensus       250 ~~~~~~~d~vid~~g~~~~~~~~~~~l~~~G~~~~~g~~~~  290 (365)
                         =.+.|+|+-|+.+...+ .-.+.++++-++..+|....
T Consensus       190 ---v~~ADIV~taT~s~~P~-~~~~~l~~G~hi~~iGs~~p  226 (315)
T PRK06823        190 ---AHAANLIVTTTPSREPL-LQAEDIQPGTHITAVGADSP  226 (315)
T ss_pred             ---hcCCCEEEEecCCCCce-eCHHHcCCCcEEEecCCCCc
Confidence               25899999988764322 22357889999998886543

>PRK14982 acyl-ACP reductase; Provisional

Probab=93.52  E-value=0.4  Score=43.60  Aligned_cols=94  Identities=19%  Similarity=0.175  Sum_probs=58.8

Q ss_pred             CCCCEEEEEcC-CHHHHHHHHHHHHHCCCCeEEEEeCChhHHHHH-HHcCCCEEEeCCCCcccHHHHHHHHHHHhCCCce
Q 017868          180 GPETNVLIMGA-GPIGLVTMLGAPRAFGAPRIVIVDVDDYRLSVA-KEIGADNIVKVSTNLQDIAEEVEKIQKAMGTGID  257 (365)
Q Consensus       180 ~~g~~vlI~G~-g~~G~~ai~~l~~~~g~~~vi~v~~~~~~~~~~-~~~g~~~~~~~~~~~~~~~~~i~~~~~~~~~~~d  257 (365)
                      -.+.+|+|+|+ |.+|..++..++...|...++.+.++.++.+.+ ++++....       .+    +.+.    -..+|
T Consensus       153 l~~k~VLVtGAtG~IGs~lar~L~~~~gv~~lilv~R~~~rl~~La~el~~~~i-------~~----l~~~----l~~aD  217 (340)
T PRK14982        153 LSKATVAVVGATGDIGSAVCRWLDAKTGVAELLLVARQQERLQELQAELGGGKI-------LS----LEEA----LPEAD  217 (340)
T ss_pred             cCCCEEEEEccChHHHHHHHHHHHhhCCCCEEEEEcCCHHHHHHHHHHhccccH-------Hh----HHHH----HccCC
Confidence            36789999998 899999999665556777888888877776543 44431110       11    2222    14689


Q ss_pred             EEEeCCCCHHHHHHHHHhcccCCEEEEEccC
Q 017868          258 VSFDCAGLNKTMSTALGATCAGGKVCLVGMG  288 (365)
Q Consensus       258 ~vid~~g~~~~~~~~~~~l~~~G~~~~~g~~  288 (365)
                      +|+.+++.+.....--..+.+.-.++.++.+
T Consensus       218 iVv~~ts~~~~~~I~~~~l~~~~~viDiAvP  248 (340)
T PRK14982        218 IVVWVASMPKGVEIDPETLKKPCLMIDGGYP  248 (340)
T ss_pred             EEEECCcCCcCCcCCHHHhCCCeEEEEecCC
Confidence            9999888643321222345555556666643

>PRK05557 fabG 3-ketoacyl-(acyl-carrier-protein) reductase; Validated

Probab=93.52  E-value=0.95  Score=38.90  Aligned_cols=83  Identities=18%  Similarity=0.258  Sum_probs=44.2

Q ss_pred             CCCEEEEEcC-CHHHHHHHHHHHHHCCCCeEEEEeCChhHHH-H---HHHcCCCE-EEeCCCC-cccHHHHHHHHHHHhC
Q 017868          181 PETNVLIMGA-GPIGLVTMLGAPRAFGAPRIVIVDVDDYRLS-V---AKEIGADN-IVKVSTN-LQDIAEEVEKIQKAMG  253 (365)
Q Consensus       181 ~g~~vlI~G~-g~~G~~ai~~l~~~~g~~~vi~v~~~~~~~~-~---~~~~g~~~-~~~~~~~-~~~~~~~i~~~~~~~~  253 (365)
                      ++.++||+|+ |.+|..++..++ ..|+++++...+.+++.+ .   ++..+... .+..+-. ..++.+.++++.+. .
T Consensus         4 ~~~~vlItG~sg~iG~~l~~~l~-~~G~~v~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~Dl~~~~~~~~~~~~~~~~-~   81 (248)
T PRK05557          4 EGKVALVTGASRGIGRAIAERLA-AQGANVVINYASSEAGAEALVAEIGALGGKALAVQGDVSDAESVERAVDEAKAE-F   81 (248)
T ss_pred             CCCEEEEECCCchHHHHHHHHHH-HCCCEEEEEeCCchhHHHHHHHHHHhcCCceEEEEcCCCCHHHHHHHHHHHHHH-c
Confidence            3568999987 999999999554 569965455443333222 2   22223222 1211221 12222233333221 2


Q ss_pred             CCceEEEeCCCC
Q 017868          254 TGIDVSFDCAGL  265 (365)
Q Consensus       254 ~~~d~vid~~g~  265 (365)
                      .++|.+|.++|.
T Consensus        82 ~~id~vi~~ag~   93 (248)
T PRK05557         82 GGVDILVNNAGI   93 (248)
T ss_pred             CCCCEEEECCCc
Confidence            478999998873

>COG0169 AroE Shikimate 5-dehydrogenase [Amino acid transport and metabolism]

Probab=93.51  E-value=0.25  Score=43.73  Aligned_cols=47  Identities=32%  Similarity=0.363  Sum_probs=38.5

Q ss_pred             CCCCEEEEEcCCHHHHHHHHHHHHHCCCCeEEEEeCChhHHHH-HHHcC
Q 017868          180 GPETNVLIMGAGPIGLVTMLGAPRAFGAPRIVIVDVDDYRLSV-AKEIG  227 (365)
Q Consensus       180 ~~g~~vlI~G~g~~G~~ai~~l~~~~g~~~vi~v~~~~~~~~~-~~~~g  227 (365)
                      .+++++||.|+|+.+.+++. .+...|++.+.++.++.+|.+. ++.++
T Consensus       124 ~~~~~vlilGAGGAarAv~~-aL~~~g~~~i~V~NRt~~ra~~La~~~~  171 (283)
T COG0169         124 VTGKRVLILGAGGAARAVAF-ALAEAGAKRITVVNRTRERAEELADLFG  171 (283)
T ss_pred             cCCCEEEEECCcHHHHHHHH-HHHHcCCCEEEEEeCCHHHHHHHHHHhh
Confidence            36899999999999999999 6678898889999898888654 45555

>TIGR01289 LPOR light-dependent protochlorophyllide reductase

Probab=93.51  E-value=0.84  Score=41.31  Aligned_cols=81  Identities=23%  Similarity=0.385  Sum_probs=47.4

Q ss_pred             CCEEEEEcC-CHHHHHHHHHHHHHCC-CCeEEEEeCChhHHH-HHHHcCC--C--EEEeCCC-CcccHHHHHHHHHHHhC
Q 017868          182 ETNVLIMGA-GPIGLVTMLGAPRAFG-APRIVIVDVDDYRLS-VAKEIGA--D--NIVKVST-NLQDIAEEVEKIQKAMG  253 (365)
Q Consensus       182 g~~vlI~G~-g~~G~~ai~~l~~~~g-~~~vi~v~~~~~~~~-~~~~~g~--~--~~~~~~~-~~~~~~~~i~~~~~~~~  253 (365)
                      +.++||+|+ +++|.++++.++ ..| + +|+.+.+++++.+ ..+++..  .  ..+..+- +..+....+.++.+. .
T Consensus         3 ~k~vlITGas~GIG~aia~~L~-~~G~~-~V~l~~r~~~~~~~~~~~l~~~~~~~~~~~~Dl~~~~~v~~~~~~~~~~-~   79 (314)
T TIGR01289         3 KPTVIITGASSGLGLYAAKALA-ATGEW-HVIMACRDFLKAEQAAKSLGMPKDSYTIMHLDLGSLDSVRQFVQQFRES-G   79 (314)
T ss_pred             CCEEEEECCCChHHHHHHHHHH-HcCCC-EEEEEeCCHHHHHHHHHHhcCCCCeEEEEEcCCCCHHHHHHHHHHHHHh-C
Confidence            568999987 899999998454 558 6 5666667666543 3344432  1  1122222 222333333333222 3


Q ss_pred             CCceEEEeCCCC
Q 017868          254 TGIDVSFDCAGL  265 (365)
Q Consensus       254 ~~~d~vid~~g~  265 (365)
                      +++|++|.++|.
T Consensus        80 ~~iD~lI~nAG~   91 (314)
T TIGR01289        80 RPLDALVCNAAV   91 (314)
T ss_pred             CCCCEEEECCCc
Confidence            579999998773

This model represents the light-dependent, NADPH-dependent form of protochlorophyllide reductase. It belongs to the short chain alcohol dehydrogenase family, in contrast to the nitrogenase-related light-independent form.

>PTZ00098 phosphoethanolamine N-methyltransferase; Provisional

Probab=93.49  E-value=1.8  Score=37.99  Aligned_cols=105  Identities=18%  Similarity=0.221  Sum_probs=64.9

Q ss_pred             HHHhcCCCCCCEEEEEcCCHHHHHHHHHHHHHCCCCeEEEEeCChhHHHHHHHcCCC-EEEeCCCCcccHHHHHHHHHHH
Q 017868          173 ACRRANIGPETNVLIMGAGPIGLVTMLGAPRAFGAPRIVIVDVDDYRLSVAKEIGAD-NIVKVSTNLQDIAEEVEKIQKA  251 (365)
Q Consensus       173 ~~~~~~~~~g~~vlI~G~g~~G~~ai~~l~~~~g~~~vi~v~~~~~~~~~~~~~g~~-~~~~~~~~~~~~~~~i~~~~~~  251 (365)
                      .+...++.++.+||=.|+|. |..+.. +++..++ .+++++.+++..+.+++.... ..+.+..  .+..    +. ..
T Consensus        44 ~l~~l~l~~~~~VLDiGcG~-G~~a~~-la~~~~~-~v~giD~s~~~~~~a~~~~~~~~~i~~~~--~D~~----~~-~~  113 (263)
T PTZ00098         44 ILSDIELNENSKVLDIGSGL-GGGCKY-INEKYGA-HVHGVDICEKMVNIAKLRNSDKNKIEFEA--NDIL----KK-DF  113 (263)
T ss_pred             HHHhCCCCCCCEEEEEcCCC-ChhhHH-HHhhcCC-EEEEEECCHHHHHHHHHHcCcCCceEEEE--CCcc----cC-CC
Confidence            34667889999999998754 555556 6566677 799999998887777653221 1111100  1110    00 01


Q ss_pred             hCCCceEEEeCC-----C---CHHHHHHHHHhcccCCEEEEEcc
Q 017868          252 MGTGIDVSFDCA-----G---LNKTMSTALGATCAGGKVCLVGM  287 (365)
Q Consensus       252 ~~~~~d~vid~~-----g---~~~~~~~~~~~l~~~G~~~~~g~  287 (365)
                      ....+|+|+..-     .   ....+..+.+.|+|+|.+++...
T Consensus       114 ~~~~FD~V~s~~~l~h~~~~d~~~~l~~i~r~LkPGG~lvi~d~  157 (263)
T PTZ00098        114 PENTFDMIYSRDAILHLSYADKKKLFEKCYKWLKPNGILLITDY  157 (263)
T ss_pred             CCCCeEEEEEhhhHHhCCHHHHHHHHHHHHHHcCCCcEEEEEEe
Confidence            135799998621     1   12356678899999999988653

>PRK13302 putative L-aspartate dehydrogenase; Provisional

Probab=93.48  E-value=1  Score=39.74  Aligned_cols=89  Identities=19%  Similarity=0.167  Sum_probs=57.4

Q ss_pred             CEEEEEcCCHHHHHHHHHHHHH-CCCCeEEEEeCChhHHH-HHHHcCCCEEEeCCCCcccHHHHHHHHHHHhCCCceEEE
Q 017868          183 TNVLIMGAGPIGLVTMLGAPRA-FGAPRIVIVDVDDYRLS-VAKEIGADNIVKVSTNLQDIAEEVEKIQKAMGTGIDVSF  260 (365)
Q Consensus       183 ~~vlI~G~g~~G~~ai~~l~~~-~g~~~vi~v~~~~~~~~-~~~~~g~~~~~~~~~~~~~~~~~i~~~~~~~~~~~d~vi  260 (365)
                      -+|.|+|.|.+|...++.+.+. .+.+.+.+.++++++.+ ++++++.....      .++.+    +.    ...|+|+
T Consensus         7 irIGIIG~G~IG~~~a~~L~~~~~~~el~aV~dr~~~~a~~~a~~~g~~~~~------~~~ee----ll----~~~D~Vv   72 (271)
T PRK13302          7 LRVAIAGLGAIGKAIAQALDRGLPGLTLSAVAVRDPQRHADFIWGLRRPPPV------VPLDQ----LA----THADIVV   72 (271)
T ss_pred             eEEEEECccHHHHHHHHHHHhcCCCeEEEEEECCCHHHHHHHHHhcCCCccc------CCHHH----Hh----cCCCEEE
Confidence            5788999999999888845442 46655556676666654 55666643221      12222    21    2479999


Q ss_pred             eCCCCHHHHHHHHHhcccCCEEEEE
Q 017868          261 DCAGLNKTMSTALGATCAGGKVCLV  285 (365)
Q Consensus       261 d~~g~~~~~~~~~~~l~~~G~~~~~  285 (365)
                      .|++...+.+....+|..+-.++..
T Consensus        73 i~tp~~~h~e~~~~aL~aGk~Vi~~   97 (271)
T PRK13302         73 EAAPASVLRAIVEPVLAAGKKAIVL   97 (271)
T ss_pred             ECCCcHHHHHHHHHHHHcCCcEEEe
Confidence            9999877766777778766555543

>PRK12938 acetyacetyl-CoA reductase; Provisional

Probab=93.47  E-value=1  Score=38.84  Aligned_cols=83  Identities=18%  Similarity=0.214  Sum_probs=46.4

Q ss_pred             CCCEEEEEcC-CHHHHHHHHHHHHHCCCCeEEEEeCChh-HHHHHH---HcCCCEE-EeCCC-CcccHHHHHHHHHHHhC
Q 017868          181 PETNVLIMGA-GPIGLVTMLGAPRAFGAPRIVIVDVDDY-RLSVAK---EIGADNI-VKVST-NLQDIAEEVEKIQKAMG  253 (365)
Q Consensus       181 ~g~~vlI~G~-g~~G~~ai~~l~~~~g~~~vi~v~~~~~-~~~~~~---~~g~~~~-~~~~~-~~~~~~~~i~~~~~~~~  253 (365)
                      ++.++||+|+ |++|..+++.++ ..|+++++...+++. +.+.++   ..+.... +..+- +.++..+.+.+..+. .
T Consensus         2 ~~k~~lVtG~s~giG~~~a~~l~-~~G~~vv~~~~~~~~~~~~~~~~~~~~~~~~~~~~~D~~~~~~~~~~~~~~~~~-~   79 (246)
T PRK12938          2 SQRIAYVTGGMGGIGTSICQRLH-KDGFKVVAGCGPNSPRRVKWLEDQKALGFDFIASEGNVGDWDSTKAAFDKVKAE-V   79 (246)
T ss_pred             CCCEEEEECCCChHHHHHHHHHH-HcCCEEEEEcCCChHHHHHHHHHHHhcCCcEEEEEcCCCCHHHHHHHHHHHHHH-h
Confidence            3578899987 999999999554 559865444443333 222333   3343322 11221 222333333333332 3


Q ss_pred             CCceEEEeCCCC
Q 017868          254 TGIDVSFDCAGL  265 (365)
Q Consensus       254 ~~~d~vid~~g~  265 (365)
                      +++|++|.+.|.
T Consensus        80 ~~id~li~~ag~   91 (246)
T PRK12938         80 GEIDVLVNNAGI   91 (246)
T ss_pred             CCCCEEEECCCC
Confidence            589999999874

>PRK12746 short chain dehydrogenase; Provisional

Probab=93.45  E-value=0.67  Score=40.23  Aligned_cols=84  Identities=19%  Similarity=0.313  Sum_probs=46.4

Q ss_pred             CCCEEEEEcC-CHHHHHHHHHHHHHCCCCeEEEEeCChhHHH-HHHHc---CCC-EEEeCCC-CcccHHHHHHHHHHHh-
Q 017868          181 PETNVLIMGA-GPIGLVTMLGAPRAFGAPRIVIVDVDDYRLS-VAKEI---GAD-NIVKVST-NLQDIAEEVEKIQKAM-  252 (365)
Q Consensus       181 ~g~~vlI~G~-g~~G~~ai~~l~~~~g~~~vi~v~~~~~~~~-~~~~~---g~~-~~~~~~~-~~~~~~~~i~~~~~~~-  252 (365)
                      .+.+++|+|+ |.+|..+++.++ ..|+++++.+.++.++.+ ....+   +.. ..+..+- +.+++.+.++++.+.. 
T Consensus         5 ~~~~ilItGasg~iG~~la~~l~-~~G~~v~i~~~r~~~~~~~~~~~~~~~~~~~~~~~~D~~d~~~i~~~~~~~~~~~~   83 (254)
T PRK12746          5 DGKVALVTGASRGIGRAIAMRLA-NDGALVAIHYGRNKQAADETIREIESNGGKAFLIEADLNSIDGVKKLVEQLKNELQ   83 (254)
T ss_pred             CCCEEEEeCCCchHHHHHHHHHH-HCCCEEEEEcCCCHHHHHHHHHHHHhcCCcEEEEEcCcCCHHHHHHHHHHHHHHhc
Confidence            3578999987 999999999554 558854444455555432 22332   221 1222221 2233333333333211 


Q ss_pred             ----CCCceEEEeCCCC
Q 017868          253 ----GTGIDVSFDCAGL  265 (365)
Q Consensus       253 ----~~~~d~vid~~g~  265 (365)
                          ..++|++|.+.|.
T Consensus        84 ~~~~~~~id~vi~~ag~  100 (254)
T PRK12746         84 IRVGTSEIDILVNNAGI  100 (254)
T ss_pred             cccCCCCccEEEECCCC
Confidence                1469999998873

>PRK14175 bifunctional 5,10-methylene-tetrahydrofolate dehydrogenase/ 5,10-methylene-tetrahydrofolate cyclohydrolase; Provisional

Probab=93.44  E-value=0.92  Score=40.17  Aligned_cols=82  Identities=17%  Similarity=0.181  Sum_probs=53.9

Q ss_pred             HHhcCC-CCCCEEEEEcCCH-HHHHHHHHHHHHCCCCeEEEEeCChhHHHHHHHcCCCEEEeCCCCcccHHHHHHHHHHH
Q 017868          174 CRRANI-GPETNVLIMGAGP-IGLVTMLGAPRAFGAPRIVIVDVDDYRLSVAKEIGADNIVKVSTNLQDIAEEVEKIQKA  251 (365)
Q Consensus       174 ~~~~~~-~~g~~vlI~G~g~-~G~~ai~~l~~~~g~~~vi~v~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~i~~~~~~  251 (365)
                      ++..++ -.|.+++|.|.|. +|..++. ++...|+.+ ..+.+..                     .++    .+.   
T Consensus       149 l~~~~i~l~Gk~vvVIGrs~~VG~pla~-lL~~~gatV-tv~~s~t---------------------~~l----~~~---  198 (286)
T PRK14175        149 LKHADIDLEGKNAVVIGRSHIVGQPVSK-LLLQKNASV-TILHSRS---------------------KDM----ASY---  198 (286)
T ss_pred             HHHcCCCCCCCEEEEECCCchhHHHHHH-HHHHCCCeE-EEEeCCc---------------------hhH----HHH---
Confidence            344443 4789999999865 9999999 556778854 4433211                     122    222   


Q ss_pred             hCCCceEEEeCCCCHHHHHHHHHhcccCCEEEEEccC
Q 017868          252 MGTGIDVSFDCAGLNKTMSTALGATCAGGKVCLVGMG  288 (365)
Q Consensus       252 ~~~~~d~vid~~g~~~~~~~~~~~l~~~G~~~~~g~~  288 (365)
                       -..+|+||.++|.+..+..  ..++++..++.+|..
T Consensus       199 -~~~ADIVIsAvg~p~~i~~--~~vk~gavVIDvGi~  232 (286)
T PRK14175        199 -LKDADVIVSAVGKPGLVTK--DVVKEGAVIIDVGNT  232 (286)
T ss_pred             -HhhCCEEEECCCCCcccCH--HHcCCCcEEEEcCCC
Confidence             1468999999998754443  467888777777754

>PRK13255 thiopurine S-methyltransferase; Reviewed

Probab=93.44  E-value=1.2  Score=37.96  Aligned_cols=97  Identities=16%  Similarity=0.173  Sum_probs=59.1

Q ss_pred             CCCCCCEEEEEcCCHHHHHHHHHHHHHCCCCeEEEEeCChhHHHHH-HHcCCCEE---------------EeCCCCcccH
Q 017868          178 NIGPETNVLIMGAGPIGLVTMLGAPRAFGAPRIVIVDVDDYRLSVA-KEIGADNI---------------VKVSTNLQDI  241 (365)
Q Consensus       178 ~~~~g~~vlI~G~g~~G~~ai~~l~~~~g~~~vi~v~~~~~~~~~~-~~~g~~~~---------------~~~~~~~~~~  241 (365)
                      ...++.+||+.|+|. |.-++- ||. .|+ .|++++.++...+.+ ++.+....               ..+..+..++
T Consensus        34 ~~~~~~rvL~~gCG~-G~da~~-LA~-~G~-~V~avD~s~~Ai~~~~~~~~l~~~~~~~~~~~~~~~~~v~~~~~D~~~l  109 (218)
T PRK13255         34 ALPAGSRVLVPLCGK-SLDMLW-LAE-QGH-EVLGVELSELAVEQFFAENGLTPQTRQSGEFEHYQAGEITIYCGDFFAL  109 (218)
T ss_pred             CCCCCCeEEEeCCCC-hHhHHH-HHh-CCC-eEEEEccCHHHHHHHHHHcCCCccccccccccccccCceEEEECcccCC
Confidence            445678999998864 777777 664 599 699999999877754 34443211               0001111111


Q ss_pred             HHHHHHHHHHhCCCceEEEeCCC--------CHHHHHHHHHhcccCCEEEEE
Q 017868          242 AEEVEKIQKAMGTGIDVSFDCAG--------LNKTMSTALGATCAGGKVCLV  285 (365)
Q Consensus       242 ~~~i~~~~~~~~~~~d~vid~~g--------~~~~~~~~~~~l~~~G~~~~~  285 (365)
                      .       ......+|.|+|..-        ....+..+.++|+++|++.++
T Consensus       110 ~-------~~~~~~fd~v~D~~~~~~l~~~~R~~~~~~l~~lL~pgG~~~l~  154 (218)
T PRK13255        110 T-------AADLADVDAVYDRAALIALPEEMRERYVQQLAALLPAGCRGLLV  154 (218)
T ss_pred             C-------cccCCCeeEEEehHhHhhCCHHHHHHHHHHHHHHcCCCCeEEEE
Confidence            0       001247899999542        123466788899999976554

>PRK07370 enoyl-(acyl carrier protein) reductase; Validated

Probab=93.43  E-value=0.58  Score=40.93  Aligned_cols=81  Identities=17%  Similarity=0.233  Sum_probs=43.7

Q ss_pred             CCCEEEEEcC---CHHHHHHHHHHHHHCCCCeEEEEeCC------hhHHHHHHH-cCCCEEEeCCC-CcccHHHHHHHHH
Q 017868          181 PETNVLIMGA---GPIGLVTMLGAPRAFGAPRIVIVDVD------DYRLSVAKE-IGADNIVKVST-NLQDIAEEVEKIQ  249 (365)
Q Consensus       181 ~g~~vlI~G~---g~~G~~ai~~l~~~~g~~~vi~v~~~------~~~~~~~~~-~g~~~~~~~~~-~~~~~~~~i~~~~  249 (365)
                      .+.++||+|+   +++|.+++..++ ..|++ |+.+.++      ++..+.+.+ .+....+..+- +.++..+.+++..
T Consensus         5 ~~k~~lItGas~~~GIG~aia~~la-~~G~~-v~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~Dl~d~~~v~~~~~~~~   82 (258)
T PRK07370          5 TGKKALVTGIANNRSIAWGIAQQLH-AAGAE-LGITYLPDEKGRFEKKVRELTEPLNPSLFLPCDVQDDAQIEETFETIK   82 (258)
T ss_pred             CCcEEEEeCCCCCCchHHHHHHHHH-HCCCE-EEEEecCcccchHHHHHHHHHhccCcceEeecCcCCHHHHHHHHHHHH
Confidence            4678999986   489999999555 56995 4444222      122222222 12111222222 2233344444443


Q ss_pred             HHhCCCceEEEeCCC
Q 017868          250 KAMGTGIDVSFDCAG  264 (365)
Q Consensus       250 ~~~~~~~d~vid~~g  264 (365)
                      +. .+++|+++.+.|
T Consensus        83 ~~-~g~iD~lv~nag   96 (258)
T PRK07370         83 QK-WGKLDILVHCLA   96 (258)
T ss_pred             HH-cCCCCEEEEccc
Confidence            32 357999999887

>PRK08261 fabG 3-ketoacyl-(acyl-carrier-protein) reductase; Provisional

Probab=93.42  E-value=0.29  Score=46.72  Aligned_cols=42  Identities=14%  Similarity=0.216  Sum_probs=32.2

Q ss_pred             hcCCCCCCEEE----EEcC-CHHHHHHHHHHHHHCCCCeEEEEeCChhH
Q 017868          176 RANIGPETNVL----IMGA-GPIGLVTMLGAPRAFGAPRIVIVDVDDYR  219 (365)
Q Consensus       176 ~~~~~~g~~vl----I~G~-g~~G~~ai~~l~~~~g~~~vi~v~~~~~~  219 (365)
                      ..++++|+.+|    |+|+ |++|.+++| +++..|++ |+++...+.+
T Consensus        28 l~~~~~~~~~~~~~~l~~~~~g~~~~~~~-~~~~~g~~-v~~~~~~~~~   74 (450)
T PRK08261         28 LRRYRPGQPLLDGPVLVGGAGRLAEALAA-LLAGLGYD-VVANNDGGLT   74 (450)
T ss_pred             ccCCCCCCCCCCCceEEccCchhHHHHHH-HHhhCCCe-eeecCccccc
Confidence            46778999988    8765 999999999 88899995 5555444443

>PRK06947 glucose-1-dehydrogenase; Provisional

Probab=93.42  E-value=0.84  Score=39.45  Aligned_cols=80  Identities=26%  Similarity=0.224  Sum_probs=44.2

Q ss_pred             CEEEEEcC-CHHHHHHHHHHHHHCCCCeEEEEeCChhHHHH----HHHcCCCE-EEeCCC-CcccHHHHHHHHHHHhCCC
Q 017868          183 TNVLIMGA-GPIGLVTMLGAPRAFGAPRIVIVDVDDYRLSV----AKEIGADN-IVKVST-NLQDIAEEVEKIQKAMGTG  255 (365)
Q Consensus       183 ~~vlI~G~-g~~G~~ai~~l~~~~g~~~vi~v~~~~~~~~~----~~~~g~~~-~~~~~~-~~~~~~~~i~~~~~~~~~~  255 (365)
                      .++||+|+ +++|..+++.++ ..|+++++...+++++.+.    ++..+... .+..+- +..++...++++.+. -++
T Consensus         3 k~ilItGas~giG~~la~~l~-~~g~~v~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~Dl~~~~~~~~~~~~~~~~-~~~   80 (248)
T PRK06947          3 KVVLITGASRGIGRATAVLAA-ARGWSVGINYARDAAAAEETADAVRAAGGRACVVAGDVANEADVIAMFDAVQSA-FGR   80 (248)
T ss_pred             cEEEEeCCCCcHHHHHHHHHH-HCCCEEEEEeCCCHHHHHHHHHHHHhcCCcEEEEEeccCCHHHHHHHHHHHHHh-cCC
Confidence            47899987 999999999565 4588654444455444322    22233221 222221 122333333333322 357


Q ss_pred             ceEEEeCCC
Q 017868          256 IDVSFDCAG  264 (365)
Q Consensus       256 ~d~vid~~g  264 (365)
                      +|++|.++|
T Consensus        81 id~li~~ag   89 (248)
T PRK06947         81 LDALVNNAG   89 (248)
T ss_pred             CCEEEECCc
Confidence            999999887

>PRK06101 short chain dehydrogenase; Provisional

Probab=93.41  E-value=0.81  Score=39.45  Aligned_cols=41  Identities=27%  Similarity=0.279  Sum_probs=30.7

Q ss_pred             CEEEEEcC-CHHHHHHHHHHHHHCCCCeEEEEeCChhHHHHHHH
Q 017868          183 TNVLIMGA-GPIGLVTMLGAPRAFGAPRIVIVDVDDYRLSVAKE  225 (365)
Q Consensus       183 ~~vlI~G~-g~~G~~ai~~l~~~~g~~~vi~v~~~~~~~~~~~~  225 (365)
                      .++||+|+ |++|..++..++ ..|+ .|+.+++++++.+.+.+
T Consensus         2 ~~vlItGas~giG~~la~~L~-~~G~-~V~~~~r~~~~~~~~~~   43 (240)
T PRK06101          2 TAVLITGATSGIGKQLALDYA-KQGW-QVIACGRNQSVLDELHT   43 (240)
T ss_pred             cEEEEEcCCcHHHHHHHHHHH-hCCC-EEEEEECCHHHHHHHHH
Confidence            46899987 999999888455 5698 57777888777665544

>PRK07411 hypothetical protein; Validated

Probab=93.37  E-value=1  Score=42.09  Aligned_cols=34  Identities=41%  Similarity=0.540  Sum_probs=28.5

Q ss_pred             CCEEEEEcCCHHHHHHHHHHHHHCCCCeEEEEeCC
Q 017868          182 ETNVLIMGAGPIGLVTMLGAPRAFGAPRIVIVDVD  216 (365)
Q Consensus       182 g~~vlI~G~g~~G~~ai~~l~~~~g~~~vi~v~~~  216 (365)
                      ..+|||.|+|++|..+++ .+-..|..++..+|.+
T Consensus        38 ~~~VlivG~GGlG~~va~-~La~~Gvg~l~lvD~D   71 (390)
T PRK07411         38 AASVLCIGTGGLGSPLLL-YLAAAGIGRIGIVDFD   71 (390)
T ss_pred             cCcEEEECCCHHHHHHHH-HHHHcCCCEEEEECCC
Confidence            468999999999999999 5557799988888654

>PRK07666 fabG 3-ketoacyl-(acyl-carrier-protein) reductase; Provisional

Probab=93.35  E-value=0.77  Score=39.44  Aligned_cols=81  Identities=21%  Similarity=0.370  Sum_probs=46.8

Q ss_pred             CCEEEEEcC-CHHHHHHHHHHHHHCCCCeEEEEeCChhHHHH-H---HHcCCCE-EEeCCC-CcccHHHHHHHHHHHhCC
Q 017868          182 ETNVLIMGA-GPIGLVTMLGAPRAFGAPRIVIVDVDDYRLSV-A---KEIGADN-IVKVST-NLQDIAEEVEKIQKAMGT  254 (365)
Q Consensus       182 g~~vlI~G~-g~~G~~ai~~l~~~~g~~~vi~v~~~~~~~~~-~---~~~g~~~-~~~~~~-~~~~~~~~i~~~~~~~~~  254 (365)
                      +.++||.|+ |.+|..++..+ ...|+ .|+.+++++++.+. .   +..+... .+..+- +..++.+.++.+.+. -+
T Consensus         7 ~~~vlVtG~sg~iG~~l~~~L-~~~G~-~Vi~~~r~~~~~~~~~~~~~~~~~~~~~~~~D~~~~~~~~~~~~~~~~~-~~   83 (239)
T PRK07666          7 GKNALITGAGRGIGRAVAIAL-AKEGV-NVGLLARTEENLKAVAEEVEAYGVKVVIATADVSDYEEVTAAIEQLKNE-LG   83 (239)
T ss_pred             CCEEEEEcCCchHHHHHHHHH-HHCCC-EEEEEeCCHHHHHHHHHHHHHhCCeEEEEECCCCCHHHHHHHHHHHHHH-cC
Confidence            578999987 89999999845 46698 57777777655432 2   2223211 122222 122333333333221 35


Q ss_pred             CceEEEeCCCC
Q 017868          255 GIDVSFDCAGL  265 (365)
Q Consensus       255 ~~d~vid~~g~  265 (365)
                      ++|.+|.+.|.
T Consensus        84 ~id~vi~~ag~   94 (239)
T PRK07666         84 SIDILINNAGI   94 (239)
T ss_pred             CccEEEEcCcc
Confidence            79999998863

>PRK05599 hypothetical protein; Provisional

Probab=93.30  E-value=1  Score=38.98  Aligned_cols=78  Identities=18%  Similarity=0.221  Sum_probs=45.8

Q ss_pred             EEEEEcC-CHHHHHHHHHHHHHCCCCeEEEEeCChhHHHHH-H---HcCCC--EEEeCCC-CcccHHHHHHHHHHHhCCC
Q 017868          184 NVLIMGA-GPIGLVTMLGAPRAFGAPRIVIVDVDDYRLSVA-K---EIGAD--NIVKVST-NLQDIAEEVEKIQKAMGTG  255 (365)
Q Consensus       184 ~vlI~G~-g~~G~~ai~~l~~~~g~~~vi~v~~~~~~~~~~-~---~~g~~--~~~~~~~-~~~~~~~~i~~~~~~~~~~  255 (365)
                      ++||+|+ +++|.+.+..++ . |. +|+.+.+++++.+.+ +   +.+..  ..+..+- +.++..+.+.++.+. .++
T Consensus         2 ~vlItGas~GIG~aia~~l~-~-g~-~Vil~~r~~~~~~~~~~~l~~~~~~~~~~~~~Dv~d~~~v~~~~~~~~~~-~g~   77 (246)
T PRK05599          2 SILILGGTSDIAGEIATLLC-H-GE-DVVLAARRPEAAQGLASDLRQRGATSVHVLSFDAQDLDTHRELVKQTQEL-AGE   77 (246)
T ss_pred             eEEEEeCccHHHHHHHHHHh-C-CC-EEEEEeCCHHHHHHHHHHHHhccCCceEEEEcccCCHHHHHHHHHHHHHh-cCC
Confidence            6899987 999999998565 4 87 566667777665432 2   33432  2222222 223333333333332 357


Q ss_pred             ceEEEeCCCC
Q 017868          256 IDVSFDCAGL  265 (365)
Q Consensus       256 ~d~vid~~g~  265 (365)
                      +|+++.+.|.
T Consensus        78 id~lv~nag~   87 (246)
T PRK05599         78 ISLAVVAFGI   87 (246)
T ss_pred             CCEEEEecCc
Confidence            9999988773

>PRK08291 ectoine utilization protein EutC; Validated

Probab=93.29  E-value=1.9  Score=39.39  Aligned_cols=95  Identities=15%  Similarity=0.201  Sum_probs=59.4

Q ss_pred             CCCCEEEEEcCCHHHHHHHHHHHHHCCCCeEEEEeCChhHHHH-HHHc----CCCEEEeCCCCcccHHHHHHHHHHHhCC
Q 017868          180 GPETNVLIMGAGPIGLVTMLGAPRAFGAPRIVIVDVDDYRLSV-AKEI----GADNIVKVSTNLQDIAEEVEKIQKAMGT  254 (365)
Q Consensus       180 ~~g~~vlI~G~g~~G~~ai~~l~~~~g~~~vi~v~~~~~~~~~-~~~~----g~~~~~~~~~~~~~~~~~i~~~~~~~~~  254 (365)
                      +...+++|.|+|..|.+.+..++...+.+.+.+.+++.++.+. ++++    +.. +..+    .++.+.+        .
T Consensus       130 ~~~~~v~IiGaG~~a~~~~~al~~~~~~~~V~v~~R~~~~a~~l~~~~~~~~g~~-v~~~----~d~~~al--------~  196 (330)
T PRK08291        130 EDASRAAVIGAGEQARLQLEALTLVRPIREVRVWARDAAKAEAYAADLRAELGIP-VTVA----RDVHEAV--------A  196 (330)
T ss_pred             CCCCEEEEECCCHHHHHHHHHHHhcCCCCEEEEEcCCHHHHHHHHHHHhhccCce-EEEe----CCHHHHH--------c
Confidence            4456899999999999877745445678888888888887653 3433    332 2111    2222222        3


Q ss_pred             CceEEEeCCCCHHHHHHHHHhcccCCEEEEEccC
Q 017868          255 GIDVSFDCAGLNKTMSTALGATCAGGKVCLVGMG  288 (365)
Q Consensus       255 ~~d~vid~~g~~~~~~~~~~~l~~~G~~~~~g~~  288 (365)
                      ..|+|+.++.....+- ....++++-++..+|..
T Consensus       197 ~aDiVi~aT~s~~p~i-~~~~l~~g~~v~~vg~d  229 (330)
T PRK08291        197 GADIIVTTTPSEEPIL-KAEWLHPGLHVTAMGSD  229 (330)
T ss_pred             cCCEEEEeeCCCCcEe-cHHHcCCCceEEeeCCC
Confidence            5899999887542211 12346777777777643

>PRK05600 thiamine biosynthesis protein ThiF; Validated

Probab=93.29  E-value=1.2  Score=41.26  Aligned_cols=35  Identities=31%  Similarity=0.528  Sum_probs=29.2

Q ss_pred             CCCEEEEEcCCHHHHHHHHHHHHHCCCCeEEEEeCC
Q 017868          181 PETNVLIMGAGPIGLVTMLGAPRAFGAPRIVIVDVD  216 (365)
Q Consensus       181 ~g~~vlI~G~g~~G~~ai~~l~~~~g~~~vi~v~~~  216 (365)
                      ...+|||.|+|++|..++. .+...|...+..+|.+
T Consensus        40 ~~~~VliiG~GglG~~v~~-~La~~Gvg~i~ivD~D   74 (370)
T PRK05600         40 HNARVLVIGAGGLGCPAMQ-SLASAGVGTITLIDDD   74 (370)
T ss_pred             cCCcEEEECCCHHHHHHHH-HHHHcCCCEEEEEeCC
Confidence            4568999999999999999 5556799888888765

>PRK05650 short chain dehydrogenase; Provisional

Probab=93.25  E-value=1.2  Score=39.08  Aligned_cols=79  Identities=23%  Similarity=0.323  Sum_probs=44.7

Q ss_pred             EEEEEcC-CHHHHHHHHHHHHHCCCCeEEEEeCChhHHHH-H---HHcCCCE-EEeCCC-CcccHHHHHHHHHHHhCCCc
Q 017868          184 NVLIMGA-GPIGLVTMLGAPRAFGAPRIVIVDVDDYRLSV-A---KEIGADN-IVKVST-NLQDIAEEVEKIQKAMGTGI  256 (365)
Q Consensus       184 ~vlI~G~-g~~G~~ai~~l~~~~g~~~vi~v~~~~~~~~~-~---~~~g~~~-~~~~~~-~~~~~~~~i~~~~~~~~~~~  256 (365)
                      ++||+|+ |++|..++..++ ..|++ |+.++++.++.+. .   +..+... .+..+- +..++.+.+..+.. ..+++
T Consensus         2 ~vlVtGasggIG~~la~~l~-~~g~~-V~~~~r~~~~~~~~~~~l~~~~~~~~~~~~D~~~~~~~~~~~~~i~~-~~~~i   78 (270)
T PRK05650          2 RVMITGAASGLGRAIALRWA-REGWR-LALADVNEEGGEETLKLLREAGGDGFYQRCDVRDYSQLTALAQACEE-KWGGI   78 (270)
T ss_pred             EEEEecCCChHHHHHHHHHH-HCCCE-EEEEeCCHHHHHHHHHHHHhcCCceEEEEccCCCHHHHHHHHHHHHH-HcCCC
Confidence            6899987 999999998555 45984 6666676665432 2   2223222 122221 11222222322222 13579


Q ss_pred             eEEEeCCCC
Q 017868          257 DVSFDCAGL  265 (365)
Q Consensus       257 d~vid~~g~  265 (365)
                      |++|.+.|.
T Consensus        79 d~lI~~ag~   87 (270)
T PRK05650         79 DVIVNNAGV   87 (270)
T ss_pred             CEEEECCCC
Confidence            999998873

>PRK09135 pteridine reductase; Provisional

Probab=93.23  E-value=1.2  Score=38.27  Aligned_cols=81  Identities=16%  Similarity=0.108  Sum_probs=44.1

Q ss_pred             CCCEEEEEcC-CHHHHHHHHHHHHHCCCCeEEEEeCC-hhHHHHH----HHcCC--CEEEeCCC-CcccHHHHHHHHHHH
Q 017868          181 PETNVLIMGA-GPIGLVTMLGAPRAFGAPRIVIVDVD-DYRLSVA----KEIGA--DNIVKVST-NLQDIAEEVEKIQKA  251 (365)
Q Consensus       181 ~g~~vlI~G~-g~~G~~ai~~l~~~~g~~~vi~v~~~-~~~~~~~----~~~g~--~~~~~~~~-~~~~~~~~i~~~~~~  251 (365)
                      .+.++||+|+ |.+|..++..++ ..|++ ++.++++ +++.+.+    .....  ...+..+- +.+++...++.+.+.
T Consensus         5 ~~~~vlItGa~g~iG~~l~~~l~-~~g~~-v~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~~Dl~~~~~~~~~~~~~~~~   82 (249)
T PRK09135          5 SAKVALITGGARRIGAAIARTLH-AAGYR-VAIHYHRSAAEADALAAELNALRPGSAAALQADLLDPDALPELVAACVAA   82 (249)
T ss_pred             CCCEEEEeCCCchHHHHHHHHHH-HCCCE-EEEEcCCCHHHHHHHHHHHHhhcCCceEEEEcCCCCHHHHHHHHHHHHHH
Confidence            4578999987 999999999555 55984 6666554 3333221    12211  11122121 112222233332221


Q ss_pred             hCCCceEEEeCCC
Q 017868          252 MGTGIDVSFDCAG  264 (365)
Q Consensus       252 ~~~~~d~vid~~g  264 (365)
                       -+++|++|.++|
T Consensus        83 -~~~~d~vi~~ag   94 (249)
T PRK09135         83 -FGRLDALVNNAS   94 (249)
T ss_pred             -cCCCCEEEECCC
Confidence             357899999887

>PRK13656 trans-2-enoyl-CoA reductase; Provisional

Probab=93.22  E-value=1.1  Score=41.39  Aligned_cols=83  Identities=19%  Similarity=0.113  Sum_probs=47.8

Q ss_pred             CCCCEEEEEcC-CHHHHH--HHHHHHHHCCCCeEEEEeCCh---h-------------HHHHHHHcCCCE-EEeCCC-Cc
Q 017868          180 GPETNVLIMGA-GPIGLV--TMLGAPRAFGAPRIVIVDVDD---Y-------------RLSVAKEIGADN-IVKVST-NL  238 (365)
Q Consensus       180 ~~g~~vlI~G~-g~~G~~--ai~~l~~~~g~~~vi~v~~~~---~-------------~~~~~~~~g~~~-~~~~~~-~~  238 (365)
                      .-++++||+|+ +++|.+  .++ .+ ..|+. ++++....   +             -.+.+++.|... .+..+- +.
T Consensus        39 ~ggK~aLVTGaSsGIGlA~~IA~-al-~~GA~-Vi~v~~~~~~~~~~~~tagwy~~~a~~~~a~~~G~~a~~i~~DVss~  115 (398)
T PRK13656         39 NGPKKVLVIGASSGYGLASRIAA-AF-GAGAD-TLGVFFEKPGTEKKTGTAGWYNSAAFDKFAKAAGLYAKSINGDAFSD  115 (398)
T ss_pred             CCCCEEEEECCCchHhHHHHHHH-HH-HcCCe-EEEEecCcchhhhcccccccchHHHHHHHHHhcCCceEEEEcCCCCH
Confidence            34578899987 899999  455 44 67995 55554221   1             123456666542 233222 22


Q ss_pred             ccHHHHHHHHHHHhCCCceEEEeCCCCH
Q 017868          239 QDIAEEVEKIQKAMGTGIDVSFDCAGLN  266 (365)
Q Consensus       239 ~~~~~~i~~~~~~~~~~~d~vid~~g~~  266 (365)
                      ++....+.++.+. -+++|+++.+++.+
T Consensus       116 E~v~~lie~I~e~-~G~IDiLVnSaA~~  142 (398)
T PRK13656        116 EIKQKVIELIKQD-LGQVDLVVYSLASP  142 (398)
T ss_pred             HHHHHHHHHHHHh-cCCCCEEEECCccC
Confidence            3334444444443 35799999988754

>PRK11036 putative S-adenosyl-L-methionine-dependent methyltransferase; Provisional

Probab=93.20  E-value=0.54  Score=41.15  Aligned_cols=95  Identities=19%  Similarity=0.282  Sum_probs=59.1

Q ss_pred             CCCCEEEEEcCCHHHHHHHHHHHHHCCCCeEEEEeCChhHHHHHHHc----CCCE-EEeCCCCcccHHHHHHHHHHHhCC
Q 017868          180 GPETNVLIMGAGPIGLVTMLGAPRAFGAPRIVIVDVDDYRLSVAKEI----GADN-IVKVSTNLQDIAEEVEKIQKAMGT  254 (365)
Q Consensus       180 ~~g~~vlI~G~g~~G~~ai~~l~~~~g~~~vi~v~~~~~~~~~~~~~----g~~~-~~~~~~~~~~~~~~i~~~~~~~~~  254 (365)
                      .++.+||-.|+|. |..+.. +++. |. .|++++.+++..+.+++.    |... +.....   +..    ++......
T Consensus        43 ~~~~~vLDiGcG~-G~~a~~-la~~-g~-~v~~vD~s~~~l~~a~~~~~~~g~~~~v~~~~~---d~~----~l~~~~~~  111 (255)
T PRK11036         43 PRPLRVLDAGGGE-GQTAIK-LAEL-GH-QVILCDLSAEMIQRAKQAAEAKGVSDNMQFIHC---AAQ----DIAQHLET  111 (255)
T ss_pred             CCCCEEEEeCCCc-hHHHHH-HHHc-CC-EEEEEECCHHHHHHHHHHHHhcCCccceEEEEc---CHH----HHhhhcCC
Confidence            4567888888764 777777 6654 76 689999999887766543    3221 111111   111    11111246


Q ss_pred             CceEEEeCCC-----C-HHHHHHHHHhcccCCEEEEE
Q 017868          255 GIDVSFDCAG-----L-NKTMSTALGATCAGGKVCLV  285 (365)
Q Consensus       255 ~~d~vid~~g-----~-~~~~~~~~~~l~~~G~~~~~  285 (365)
                      .+|+|+....     . ...+..+.+.|+++|.++..
T Consensus       112 ~fD~V~~~~vl~~~~~~~~~l~~~~~~LkpgG~l~i~  148 (255)
T PRK11036        112 PVDLILFHAVLEWVADPKSVLQTLWSVLRPGGALSLM  148 (255)
T ss_pred             CCCEEEehhHHHhhCCHHHHHHHHHHHcCCCeEEEEE
Confidence            8999985321     1 23567888999999999765

>PRK14903 16S rRNA methyltransferase B; Provisional

Probab=93.19  E-value=2.1  Score=40.60  Aligned_cols=103  Identities=18%  Similarity=0.243  Sum_probs=61.3

Q ss_pred             HhcCCCCCCEEEEEcCCHHHHHHHHHHHHHC-CCCeEEEEeCChhHHHHH----HHcCCCEEEeCCCCcccHHHHHHHHH
Q 017868          175 RRANIGPETNVLIMGAGPIGLVTMLGAPRAF-GAPRIVIVDVDDYRLSVA----KEIGADNIVKVSTNLQDIAEEVEKIQ  249 (365)
Q Consensus       175 ~~~~~~~g~~vlI~G~g~~G~~ai~~l~~~~-g~~~vi~v~~~~~~~~~~----~~~g~~~~~~~~~~~~~~~~~i~~~~  249 (365)
                      ...++++|++||=.|+|+ |..+++ ++..+ +...|+++|.++++.+.+    +++|...+.....+..++    ... 
T Consensus       231 ~~l~~~~g~~VLD~cagp-Ggkt~~-la~~~~~~g~V~a~Dis~~rl~~~~~n~~r~g~~~v~~~~~Da~~l----~~~-  303 (431)
T PRK14903        231 LLMELEPGLRVLDTCAAP-GGKTTA-IAELMKDQGKILAVDISREKIQLVEKHAKRLKLSSIEIKIADAERL----TEY-  303 (431)
T ss_pred             HHhCCCCCCEEEEeCCCc-cHHHHH-HHHHcCCCCEEEEEECCHHHHHHHHHHHHHcCCCeEEEEECchhhh----hhh-
Confidence            345778999988876643 434444 44444 233799999999987654    556765432222222222    111 


Q ss_pred             HHhCCCceEEEe---CCCCH-------------------------HHHHHHHHhcccCCEEEEEc
Q 017868          250 KAMGTGIDVSFD---CAGLN-------------------------KTMSTALGATCAGGKVCLVG  286 (365)
Q Consensus       250 ~~~~~~~d~vid---~~g~~-------------------------~~~~~~~~~l~~~G~~~~~g  286 (365)
                        ....+|.|+-   |+|..                         ..+..+++.|+++|.++...
T Consensus       304 --~~~~fD~Vl~DaPCsg~G~~~~~p~~~~~~~~~~~~~l~~~Q~~iL~~a~~~LkpGG~LvYsT  366 (431)
T PRK14903        304 --VQDTFDRILVDAPCTSLGTARNHPEVLRRVNKEDFKKLSEIQLRIVSQAWKLLEKGGILLYST  366 (431)
T ss_pred             --hhccCCEEEECCCCCCCccccCChHHHHhCCHHHHHHHHHHHHHHHHHHHHhcCCCCEEEEEE
Confidence              1356999874   44421                         23557888999999987653

>PLN02244 tocopherol O-methyltransferase

Probab=93.19  E-value=2.1  Score=39.30  Aligned_cols=96  Identities=14%  Similarity=0.209  Sum_probs=59.7

Q ss_pred             CCCCEEEEEcCCHHHHHHHHHHHHHCCCCeEEEEeCChhHHHHHHH----cCCCE-EEeCCCCcccHHHHHHHHHHHhCC
Q 017868          180 GPETNVLIMGAGPIGLVTMLGAPRAFGAPRIVIVDVDDYRLSVAKE----IGADN-IVKVSTNLQDIAEEVEKIQKAMGT  254 (365)
Q Consensus       180 ~~g~~vlI~G~g~~G~~ai~~l~~~~g~~~vi~v~~~~~~~~~~~~----~g~~~-~~~~~~~~~~~~~~i~~~~~~~~~  254 (365)
                      +++++||=.|+|. |..+.. +++..|+ .|++++.++...+.+++    .+... +.....+..++        ....+
T Consensus       117 ~~~~~VLDiGCG~-G~~~~~-La~~~g~-~v~gvD~s~~~i~~a~~~~~~~g~~~~v~~~~~D~~~~--------~~~~~  185 (340)
T PLN02244        117 KRPKRIVDVGCGI-GGSSRY-LARKYGA-NVKGITLSPVQAARANALAAAQGLSDKVSFQVADALNQ--------PFEDG  185 (340)
T ss_pred             CCCCeEEEecCCC-CHHHHH-HHHhcCC-EEEEEECCHHHHHHHHHHHHhcCCCCceEEEEcCcccC--------CCCCC
Confidence            6889998888754 556666 6666677 79999999876655443    34321 11111111111        00135


Q ss_pred             CceEEEeCCC-----C-HHHHHHHHHhcccCCEEEEEc
Q 017868          255 GIDVSFDCAG-----L-NKTMSTALGATCAGGKVCLVG  286 (365)
Q Consensus       255 ~~d~vid~~g-----~-~~~~~~~~~~l~~~G~~~~~g  286 (365)
                      .+|+|+....     . ...+..+.++|+++|++++..
T Consensus       186 ~FD~V~s~~~~~h~~d~~~~l~e~~rvLkpGG~lvi~~  223 (340)
T PLN02244        186 QFDLVWSMESGEHMPDKRKFVQELARVAAPGGRIIIVT  223 (340)
T ss_pred             CccEEEECCchhccCCHHHHHHHHHHHcCCCcEEEEEE
Confidence            7999986322     1 245668889999999998764

>PRK07878 molybdopterin biosynthesis-like protein MoeZ; Validated

Probab=93.19  E-value=1.2  Score=41.64  Aligned_cols=35  Identities=37%  Similarity=0.546  Sum_probs=28.5

Q ss_pred             CCCEEEEEcCCHHHHHHHHHHHHHCCCCeEEEEeCC
Q 017868          181 PETNVLIMGAGPIGLVTMLGAPRAFGAPRIVIVDVD  216 (365)
Q Consensus       181 ~g~~vlI~G~g~~G~~ai~~l~~~~g~~~vi~v~~~  216 (365)
                      ...+|||.|+|++|..++. .+.+.|...+..+|.+
T Consensus        41 ~~~~VlviG~GGlGs~va~-~La~~Gvg~i~lvD~D   75 (392)
T PRK07878         41 KNARVLVIGAGGLGSPTLL-YLAAAGVGTLGIVEFD   75 (392)
T ss_pred             hcCCEEEECCCHHHHHHHH-HHHHcCCCeEEEECCC
Confidence            3468999999999999999 5557799888888654

>PRK12935 acetoacetyl-CoA reductase; Provisional

Probab=93.18  E-value=1.1  Score=38.73  Aligned_cols=83  Identities=17%  Similarity=0.230  Sum_probs=45.7

Q ss_pred             CCCEEEEEcC-CHHHHHHHHHHHHHCCCCeEEEEeCChhHHH-HHH---HcCCCE-EEeCCCC-cccHHHHHHHHHHHhC
Q 017868          181 PETNVLIMGA-GPIGLVTMLGAPRAFGAPRIVIVDVDDYRLS-VAK---EIGADN-IVKVSTN-LQDIAEEVEKIQKAMG  253 (365)
Q Consensus       181 ~g~~vlI~G~-g~~G~~ai~~l~~~~g~~~vi~v~~~~~~~~-~~~---~~g~~~-~~~~~~~-~~~~~~~i~~~~~~~~  253 (365)
                      .+.++||+|+ |.+|..++..++ ..|+++++...+++++.+ ..+   ..+... .+..+-. .+++.+.+++..+. -
T Consensus         5 ~~~~~lItG~s~~iG~~la~~l~-~~g~~v~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~D~~~~~~~~~~~~~~~~~-~   82 (247)
T PRK12935          5 NGKVAIVTGGAKGIGKAITVALA-QEGAKVVINYNSSKEAAENLVNELGKEGHDVYAVQADVSKVEDANRLVEEAVNH-F   82 (247)
T ss_pred             CCCEEEEECCCCHHHHHHHHHHH-HcCCEEEEEcCCcHHHHHHHHHHHHhcCCeEEEEECCCCCHHHHHHHHHHHHHH-c
Confidence            3679999987 999999999555 569864443344444332 222   233221 2222222 22333333333322 2


Q ss_pred             CCceEEEeCCCC
Q 017868          254 TGIDVSFDCAGL  265 (365)
Q Consensus       254 ~~~d~vid~~g~  265 (365)
                      +.+|++|.++|.
T Consensus        83 ~~id~vi~~ag~   94 (247)
T PRK12935         83 GKVDILVNNAGI   94 (247)
T ss_pred             CCCCEEEECCCC
Confidence            468999998874

>COG1712 Predicted dinucleotide-utilizing enzyme [General function prediction only]

Probab=93.14  E-value=1.1  Score=37.88  Aligned_cols=87  Identities=21%  Similarity=0.268  Sum_probs=56.5

Q ss_pred             EEEEEcCCHHHHHHHHHHHHH--CCCCeEEEEeCChhHHHHHH-HcCCCEEEeCCCCcccHHHHHHHHHHHhCCCceEEE
Q 017868          184 NVLIMGAGPIGLVTMLGAPRA--FGAPRIVIVDVDDYRLSVAK-EIGADNIVKVSTNLQDIAEEVEKIQKAMGTGIDVSF  260 (365)
Q Consensus       184 ~vlI~G~g~~G~~ai~~l~~~--~g~~~vi~v~~~~~~~~~~~-~~g~~~~~~~~~~~~~~~~~i~~~~~~~~~~~d~vi  260 (365)
                      +|.+.|+|.+|...+. +.+.  ..++.+++.+++.+|...+. .++...+.       ++.+.+        ..+|+++
T Consensus         2 ~vgiVGcGaIG~~l~e-~v~~~~~~~e~v~v~D~~~ek~~~~~~~~~~~~~s-------~ide~~--------~~~DlvV   65 (255)
T COG1712           2 KVGIVGCGAIGKFLLE-LVRDGRVDFELVAVYDRDEEKAKELEASVGRRCVS-------DIDELI--------AEVDLVV   65 (255)
T ss_pred             eEEEEeccHHHHHHHH-HHhcCCcceeEEEEecCCHHHHHHHHhhcCCCccc-------cHHHHh--------hccceee
Confidence            5778899999999999 5543  34778888899888877554 45543321       121221        3577888


Q ss_pred             eCCCCHHHHHHHHHhcccCCEEEEEc
Q 017868          261 DCAGLNKTMSTALGATCAGGKVCLVG  286 (365)
Q Consensus       261 d~~g~~~~~~~~~~~l~~~G~~~~~g  286 (365)
                      +|++.....+...+.|..+=.++.++
T Consensus        66 EaAS~~Av~e~~~~~L~~g~d~iV~S   91 (255)
T COG1712          66 EAASPEAVREYVPKILKAGIDVIVMS   91 (255)
T ss_pred             eeCCHHHHHHHhHHHHhcCCCEEEEe
Confidence            88776655556666777655554443

>PRK07775 short chain dehydrogenase; Provisional

Probab=93.13  E-value=1  Score=39.76  Aligned_cols=81  Identities=19%  Similarity=0.211  Sum_probs=45.1

Q ss_pred             CCEEEEEcC-CHHHHHHHHHHHHHCCCCeEEEEeCChhHHH-H---HHHcCCCE-EEeCCC-CcccHHHHHHHHHHHhCC
Q 017868          182 ETNVLIMGA-GPIGLVTMLGAPRAFGAPRIVIVDVDDYRLS-V---AKEIGADN-IVKVST-NLQDIAEEVEKIQKAMGT  254 (365)
Q Consensus       182 g~~vlI~G~-g~~G~~ai~~l~~~~g~~~vi~v~~~~~~~~-~---~~~~g~~~-~~~~~~-~~~~~~~~i~~~~~~~~~  254 (365)
                      ..++||+|+ |.+|.++++.++ ..|+ .|+++.++.++.+ .   ++..+... .+..+- +.+++.+.++...+. -+
T Consensus        10 ~~~vlVtGa~g~iG~~la~~L~-~~G~-~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~Dl~~~~~~~~~~~~~~~~-~~   86 (274)
T PRK07775         10 RRPALVAGASSGIGAATAIELA-AAGF-PVALGARRVEKCEELVDKIRADGGEAVAFPLDVTDPDSVKSFVAQAEEA-LG   86 (274)
T ss_pred             CCEEEEECCCchHHHHHHHHHH-HCCC-EEEEEeCCHHHHHHHHHHHHhcCCeEEEEECCCCCHHHHHHHHHHHHHh-cC
Confidence            458999987 999999999555 5698 4666666555433 2   22234322 112221 122222333332221 24


Q ss_pred             CceEEEeCCCC
Q 017868          255 GIDVSFDCAGL  265 (365)
Q Consensus       255 ~~d~vid~~g~  265 (365)
                      ++|++|.++|.
T Consensus        87 ~id~vi~~Ag~   97 (274)
T PRK07775         87 EIEVLVSGAGD   97 (274)
T ss_pred             CCCEEEECCCc
Confidence            78999998874

>PRK06940 short chain dehydrogenase; Provisional

Probab=93.12  E-value=0.93  Score=40.08  Aligned_cols=78  Identities=21%  Similarity=0.297  Sum_probs=45.5

Q ss_pred             CEEEEEcCCHHHHHHHHHHHHHCCCCeEEEEeCChhHHH-HHHH---cCCCE-EEeCCC-CcccHHHHHHHHHHHhCCCc
Q 017868          183 TNVLIMGAGPIGLVTMLGAPRAFGAPRIVIVDVDDYRLS-VAKE---IGADN-IVKVST-NLQDIAEEVEKIQKAMGTGI  256 (365)
Q Consensus       183 ~~vlI~G~g~~G~~ai~~l~~~~g~~~vi~v~~~~~~~~-~~~~---~g~~~-~~~~~~-~~~~~~~~i~~~~~~~~~~~  256 (365)
                      +++||+|+|++|.+++..+ . .|+ .|+.+++++++.+ ..++   .+... .+..+- +.++..+.+.+. +. -+++
T Consensus         3 k~~lItGa~gIG~~la~~l-~-~G~-~Vv~~~r~~~~~~~~~~~l~~~~~~~~~~~~Dv~d~~~i~~~~~~~-~~-~g~i   77 (275)
T PRK06940          3 EVVVVIGAGGIGQAIARRV-G-AGK-KVLLADYNEENLEAAAKTLREAGFDVSTQEVDVSSRESVKALAATA-QT-LGPV   77 (275)
T ss_pred             CEEEEECCChHHHHHHHHH-h-CCC-EEEEEeCCHHHHHHHHHHHHhcCCeEEEEEeecCCHHHHHHHHHHH-Hh-cCCC
Confidence            5778889999999999955 3 588 5677777765543 2222   23221 222222 222333333333 21 3579


Q ss_pred             eEEEeCCCC
Q 017868          257 DVSFDCAGL  265 (365)
Q Consensus       257 d~vid~~g~  265 (365)
                      |++|.++|.
T Consensus        78 d~li~nAG~   86 (275)
T PRK06940         78 TGLVHTAGV   86 (275)
T ss_pred             CEEEECCCc
Confidence            999998874

>TIGR01318 gltD_gamma_fam glutamate synthase small subunit family protein, proteobacterial

Probab=93.08  E-value=0.49  Score=45.47  Aligned_cols=77  Identities=22%  Similarity=0.327  Sum_probs=50.1

Q ss_pred             CCCEEEEEcCCHHHHHHHHHHHHHCCCCeEEEEeCCh---------------------hHHHHHHHcCCCEEEeCCCCcc
Q 017868          181 PETNVLIMGAGPIGLVTMLGAPRAFGAPRIVIVDVDD---------------------YRLSVAKEIGADNIVKVSTNLQ  239 (365)
Q Consensus       181 ~g~~vlI~G~g~~G~~ai~~l~~~~g~~~vi~v~~~~---------------------~~~~~~~~~g~~~~~~~~~~~~  239 (365)
                      .+++|+|.|+|+.|+.++. .++..|.+ |+..+..+                     ...+.++++|++...+..- ..
T Consensus       140 ~~~~V~IIG~GpaGl~aA~-~l~~~G~~-V~i~e~~~~~gG~l~~gip~~~~~~~~~~~~~~~~~~~Gv~~~~~~~v-~~  216 (467)
T TIGR01318       140 TGKRVAVIGAGPAGLACAD-ILARAGVQ-VVVFDRHPEIGGLLTFGIPSFKLDKAVLSRRREIFTAMGIEFHLNCEV-GR  216 (467)
T ss_pred             CCCeEEEECCCHHHHHHHH-HHHHcCCe-EEEEecCCCCCceeeecCccccCCHHHHHHHHHHHHHCCCEEECCCEe-CC
Confidence            6789999999999999999 66677995 55565443                     2456778888765332110 11


Q ss_pred             cHHHHHHHHHHHhCCCceEEEeCCCCH
Q 017868          240 DIAEEVEKIQKAMGTGIDVSFDCAGLN  266 (365)
Q Consensus       240 ~~~~~i~~~~~~~~~~~d~vid~~g~~  266 (365)
                      +.  .+...    ..++|.||.++|..
T Consensus       217 ~~--~~~~~----~~~~D~vilAtGa~  237 (467)
T TIGR01318       217 DI--SLDDL----LEDYDAVFLGVGTY  237 (467)
T ss_pred             cc--CHHHH----HhcCCEEEEEeCCC
Confidence            11  11222    13699999999964

This model represents one of three built for the NADPH-dependent or NADH-dependent glutamate synthase (EC 1.4.1.13 and 1.4.1.14, respectively) small subunit and homologs. TIGR01317 describes the small subunit (or equivalent region from longer forms) in eukaryotes, Gram-positive bacteria, and some other lineages, both NADH and NADPH-dependent. TIGR01316 describes a protein of similar length, from Archaea and a number of bacterial lineages, that forms glutamate synthase homotetramers without a large subunit. This model describes both glutatate synthase small subunit and closely related paralogs of unknown function from a number of gamma and alpha subdivision Proteobacteria, including E. coli.

>PRK14901 16S rRNA methyltransferase B; Provisional

Probab=93.06  E-value=1.3  Score=42.20  Aligned_cols=105  Identities=22%  Similarity=0.269  Sum_probs=60.6

Q ss_pred             HhcCCCCCCEEEEEcCCHHHHHHHHHHHHHCC-CCeEEEEeCChhHHHH----HHHcCCCEEEeCCCCcccHHHHHHHHH
Q 017868          175 RRANIGPETNVLIMGAGPIGLVTMLGAPRAFG-APRIVIVDVDDYRLSV----AKEIGADNIVKVSTNLQDIAEEVEKIQ  249 (365)
Q Consensus       175 ~~~~~~~g~~vlI~G~g~~G~~ai~~l~~~~g-~~~vi~v~~~~~~~~~----~~~~g~~~~~~~~~~~~~~~~~i~~~~  249 (365)
                      ....+++|++||=.|+|+ |..+.. +++.++ ...+++++.++++.+.    ++.+|...+.....+..++....    
T Consensus       246 ~~l~~~~g~~VLDl~ag~-G~kt~~-la~~~~~~g~v~a~D~~~~rl~~~~~n~~r~g~~~v~~~~~D~~~~~~~~----  319 (434)
T PRK14901        246 PLLDPQPGEVILDACAAP-GGKTTH-IAELMGDQGEIWAVDRSASRLKKLQENAQRLGLKSIKILAADSRNLLELK----  319 (434)
T ss_pred             HHhCCCCcCEEEEeCCCC-chhHHH-HHHHhCCCceEEEEcCCHHHHHHHHHHHHHcCCCeEEEEeCChhhccccc----
Confidence            345678899988876533 333344 333333 2379999999987754    45577765433222222211000    


Q ss_pred             HHhCCCceEEE-e--CCCC-------------------------HHHHHHHHHhcccCCEEEEE
Q 017868          250 KAMGTGIDVSF-D--CAGL-------------------------NKTMSTALGATCAGGKVCLV  285 (365)
Q Consensus       250 ~~~~~~~d~vi-d--~~g~-------------------------~~~~~~~~~~l~~~G~~~~~  285 (365)
                      ......+|.|+ |  |+|.                         ...+..+++.|+++|+++..
T Consensus       320 ~~~~~~fD~Vl~DaPCSg~G~~~r~p~~~~~~~~~~~~~l~~~Q~~iL~~a~~~lkpgG~lvys  383 (434)
T PRK14901        320 PQWRGYFDRILLDAPCSGLGTLHRHPDARWRQTPEKIQELAPLQAELLESLAPLLKPGGTLVYA  383 (434)
T ss_pred             ccccccCCEEEEeCCCCcccccccCcchhhhCCHHHHHHHHHHHHHHHHHHHHhcCCCCEEEEE
Confidence            00135689987 3  4542                         13466788899999998754

>PRK08945 putative oxoacyl-(acyl carrier protein) reductase; Provisional

Probab=93.02  E-value=0.9  Score=39.30  Aligned_cols=84  Identities=21%  Similarity=0.330  Sum_probs=49.4

Q ss_pred             CCCCCEEEEEcC-CHHHHHHHHHHHHHCCCCeEEEEeCChhHHHH----HHHcCCCE--EE--eCCC-CcccHHHHHHHH
Q 017868          179 IGPETNVLIMGA-GPIGLVTMLGAPRAFGAPRIVIVDVDDYRLSV----AKEIGADN--IV--KVST-NLQDIAEEVEKI  248 (365)
Q Consensus       179 ~~~g~~vlI~G~-g~~G~~ai~~l~~~~g~~~vi~v~~~~~~~~~----~~~~g~~~--~~--~~~~-~~~~~~~~i~~~  248 (365)
                      ..++.++||+|+ |.+|..+++.++ ..|+ .|++++++.++.+.    +++.+...  .+  +++. +..++.+....+
T Consensus         9 ~~~~k~vlItG~~g~iG~~la~~l~-~~G~-~Vi~~~r~~~~~~~~~~~l~~~~~~~~~~~~~d~~~~~~~~~~~~~~~~   86 (247)
T PRK08945          9 LLKDRIILVTGAGDGIGREAALTYA-RHGA-TVILLGRTEEKLEAVYDEIEAAGGPQPAIIPLDLLTATPQNYQQLADTI   86 (247)
T ss_pred             ccCCCEEEEeCCCchHHHHHHHHHH-HCCC-cEEEEeCCHHHHHHHHHHHHhcCCCCceEEEecccCCCHHHHHHHHHHH
Confidence            457889999987 999999999565 4698 56777777655322    22333221  12  2211 123333333333


Q ss_pred             HHHhCCCceEEEeCCCC
Q 017868          249 QKAMGTGIDVSFDCAGL  265 (365)
Q Consensus       249 ~~~~~~~~d~vid~~g~  265 (365)
                      .+. .+++|.+|.++|.
T Consensus        87 ~~~-~~~id~vi~~Ag~  102 (247)
T PRK08945         87 EEQ-FGRLDGVLHNAGL  102 (247)
T ss_pred             HHH-hCCCCEEEECCcc
Confidence            332 3579999988763

>PRK12744 short chain dehydrogenase; Provisional

Probab=93.00  E-value=0.99  Score=39.32  Aligned_cols=83  Identities=18%  Similarity=0.177  Sum_probs=43.9

Q ss_pred             CCCEEEEEcC-CHHHHHHHHHHHHHCCCCeEEEEeCC---hhHH-HH---HHHcCCCE-EEeCCC-CcccHHHHHHHHHH
Q 017868          181 PETNVLIMGA-GPIGLVTMLGAPRAFGAPRIVIVDVD---DYRL-SV---AKEIGADN-IVKVST-NLQDIAEEVEKIQK  250 (365)
Q Consensus       181 ~g~~vlI~G~-g~~G~~ai~~l~~~~g~~~vi~v~~~---~~~~-~~---~~~~g~~~-~~~~~~-~~~~~~~~i~~~~~  250 (365)
                      .+.++||+|+ |++|.++++.+ ...|+++++...+.   .++. +.   ++..+... .+..+- +.++....+.+..+
T Consensus         7 ~~k~vlItGa~~gIG~~~a~~l-~~~G~~vv~i~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~D~~~~~~~~~~~~~~~~   85 (257)
T PRK12744          7 KGKVVLIAGGAKNLGGLIARDL-AAQGAKAVAIHYNSAASKADAEETVAAVKAAGAKAVAFQADLTTAAAVEKLFDDAKA   85 (257)
T ss_pred             CCcEEEEECCCchHHHHHHHHH-HHCCCcEEEEecCCccchHHHHHHHHHHHHhCCcEEEEecCcCCHHHHHHHHHHHHH
Confidence            4678999987 99999999955 45698644443222   1221 22   22234321 222222 11222222333222


Q ss_pred             HhCCCceEEEeCCCC
Q 017868          251 AMGTGIDVSFDCAGL  265 (365)
Q Consensus       251 ~~~~~~d~vid~~g~  265 (365)
                      . .+++|++|.++|.
T Consensus        86 ~-~~~id~li~~ag~   99 (257)
T PRK12744         86 A-FGRPDIAINTVGK   99 (257)
T ss_pred             h-hCCCCEEEECCcc
Confidence            1 3579999998874

>cd01492 Aos1_SUMO Ubiquitin activating enzyme (E1) subunit Aos1

Probab=92.90  E-value=1.4  Score=36.88  Aligned_cols=35  Identities=17%  Similarity=0.228  Sum_probs=28.8

Q ss_pred             CCCEEEEEcCCHHHHHHHHHHHHHCCCCeEEEEeCC
Q 017868          181 PETNVLIMGAGPIGLVTMLGAPRAFGAPRIVIVDVD  216 (365)
Q Consensus       181 ~g~~vlI~G~g~~G~~ai~~l~~~~g~~~vi~v~~~  216 (365)
                      ...+|+|.|+|++|..++. .+-..|...+..+|.+
T Consensus        20 ~~s~VlIiG~gglG~evak-~La~~GVg~i~lvD~d   54 (197)
T cd01492          20 RSARILLIGLKGLGAEIAK-NLVLSGIGSLTILDDR   54 (197)
T ss_pred             HhCcEEEEcCCHHHHHHHH-HHHHcCCCEEEEEECC
Confidence            3468999999999999999 5567799988888654

Aos1 is part of the heterodimeric activating enzyme (E1), specific for the SUMO family of ubiquitin-like proteins (Ubls). E1 enzymes are part of a conjugation cascade to attach Ub or Ubls, covalently to substrate proteins consisting of activating (E1), conjugating (E2), and/or ligating (E3) enzymes. E1 activates ubiquitin by C-terminal adenylation, and subsequently forms a highly reactive thioester bond between its catalytic cysteine and Ubls C-terminus. The E1 also associates with E2 and promotes ubiquitin transfer to the E2's catalytic cysteine. Post-translational modification by SUMO family of ubiquitin-like proteins (Ublps) is involved in cell division, nuclear transport, the stress response and signal transduction. Aos1 contains part of the adenylation domain.

>TIGR03589 PseB UDP-N-acetylglucosamine 4,6-dehydratase

Probab=92.90  E-value=1  Score=40.88  Aligned_cols=79  Identities=18%  Similarity=0.302  Sum_probs=43.8

Q ss_pred             CCCEEEEEcC-CHHHHHHHHHHHHHCCCCeEEEEeCChhHHHH-HHHcCCCEEEeCCCCcccHHHHHHHHHHHhCCCceE
Q 017868          181 PETNVLIMGA-GPIGLVTMLGAPRAFGAPRIVIVDVDDYRLSV-AKEIGADNIVKVSTNLQDIAEEVEKIQKAMGTGIDV  258 (365)
Q Consensus       181 ~g~~vlI~G~-g~~G~~ai~~l~~~~g~~~vi~v~~~~~~~~~-~~~~g~~~~~~~~~~~~~~~~~i~~~~~~~~~~~d~  258 (365)
                      ++.+|||+|+ |.+|..+++.+++.-+...|+++++++.+.+. .+.+....+..+..+-.+. +.+.+..    .++|+
T Consensus         3 ~~k~vLVTGatG~IG~~l~~~L~~~g~~~~V~~~~r~~~~~~~~~~~~~~~~~~~v~~Dl~d~-~~l~~~~----~~iD~   77 (324)
T TIGR03589         3 NNKSILITGGTGSFGKAFISRLLENYNPKKIIIYSRDELKQWEMQQKFPAPCLRFFIGDVRDK-ERLTRAL----RGVDY   77 (324)
T ss_pred             CCCEEEEeCCCCHHHHHHHHHHHHhCCCcEEEEEcCChhHHHHHHHHhCCCcEEEEEccCCCH-HHHHHHH----hcCCE
Confidence            3678999987 99999999956554222356777666554432 2333221111111111222 2233332    35899


Q ss_pred             EEeCCC
Q 017868          259 SFDCAG  264 (365)
Q Consensus       259 vid~~g  264 (365)
                      ||.++|
T Consensus        78 Vih~Ag   83 (324)
T TIGR03589        78 VVHAAA   83 (324)
T ss_pred             EEECcc
Confidence            999876

This enzyme catalyzes the first step in the biosynthesis of pseudaminic acid, the conversion of UDP-N-acetylglucosamine to UDP-4-keto-6-deoxy-N-acetylglucosamine. These sequences are members of the broader pfam01073 (3-beta hydroxysteroid dehydrogenase/isomerase family) family.

>PRK13304 L-aspartate dehydrogenase; Reviewed

Probab=92.88  E-value=1.5  Score=38.61  Aligned_cols=87  Identities=20%  Similarity=0.256  Sum_probs=54.4

Q ss_pred             EEEEEcCCHHHHHHHHHHHHHC-CCCeEEEEeCChhHHHH-HHHcCCCEEEeCCCCcccHHHHHHHHHHHhCCCceEEEe
Q 017868          184 NVLIMGAGPIGLVTMLGAPRAF-GAPRIVIVDVDDYRLSV-AKEIGADNIVKVSTNLQDIAEEVEKIQKAMGTGIDVSFD  261 (365)
Q Consensus       184 ~vlI~G~g~~G~~ai~~l~~~~-g~~~vi~v~~~~~~~~~-~~~~g~~~~~~~~~~~~~~~~~i~~~~~~~~~~~d~vid  261 (365)
                      +|.|.|+|.+|...++.+.+.. +.+.+.+++++.++.+. .+.++...   +    .++.+    +.    ..+|+|++
T Consensus         3 rIgIIG~G~iG~~ia~~l~~~~~~~elv~v~d~~~~~a~~~a~~~~~~~---~----~~~~e----ll----~~~DvVvi   67 (265)
T PRK13304          3 KIGIVGCGAIASLITKAILSGRINAELYAFYDRNLEKAENLASKTGAKA---C----LSIDE----LV----EDVDLVVE   67 (265)
T ss_pred             EEEEECccHHHHHHHHHHHcCCCCeEEEEEECCCHHHHHHHHHhcCCee---E----CCHHH----Hh----cCCCEEEE
Confidence            6889999999998888444332 46556667777766554 34555321   1    12222    21    36899999


Q ss_pred             CCCCHHHHHHHHHhcccCCEEEEE
Q 017868          262 CAGLNKTMSTALGATCAGGKVCLV  285 (365)
Q Consensus       262 ~~g~~~~~~~~~~~l~~~G~~~~~  285 (365)
                      |++...+.+....++..+-.++..
T Consensus        68 ~a~~~~~~~~~~~al~~Gk~Vvv~   91 (265)
T PRK13304         68 CASVNAVEEVVPKSLENGKDVIIM   91 (265)
T ss_pred             cCChHHHHHHHHHHHHcCCCEEEE
Confidence            988766666677777755445443

>TIGR01829 AcAcCoA_reduct acetoacetyl-CoA reductase

Probab=92.84  E-value=0.77  Score=39.41  Aligned_cols=80  Identities=23%  Similarity=0.255  Sum_probs=43.2

Q ss_pred             CEEEEEcC-CHHHHHHHHHHHHHCCCCeEEEEeC-ChhHHH-HHHHc---CCC-EEEeCCC-CcccHHHHHHHHHHHhCC
Q 017868          183 TNVLIMGA-GPIGLVTMLGAPRAFGAPRIVIVDV-DDYRLS-VAKEI---GAD-NIVKVST-NLQDIAEEVEKIQKAMGT  254 (365)
Q Consensus       183 ~~vlI~G~-g~~G~~ai~~l~~~~g~~~vi~v~~-~~~~~~-~~~~~---g~~-~~~~~~~-~~~~~~~~i~~~~~~~~~  254 (365)
                      .++||+|+ |++|..++..+ ...|++ ++++.+ ++++.+ ...++   +.. ..+..+- +..++...+.++.+. .+
T Consensus         1 k~~lItG~sg~iG~~la~~l-~~~G~~-v~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~D~~~~~~~~~~~~~~~~~-~~   77 (242)
T TIGR01829         1 RIALVTGGMGGIGTAICQRL-AKDGYR-VAANCGPNEERAEAWLQEQGALGFDFRVVEGDVSSFESCKAAVAKVEAE-LG   77 (242)
T ss_pred             CEEEEECCCChHHHHHHHHH-HHCCCE-EEEEeCCCHHHHHHHHHHHHhhCCceEEEEecCCCHHHHHHHHHHHHHH-cC
Confidence            36899987 99999999955 456985 555544 443322 22222   211 1122221 122333333333332 35


Q ss_pred             CceEEEeCCCC
Q 017868          255 GIDVSFDCAGL  265 (365)
Q Consensus       255 ~~d~vid~~g~  265 (365)
                      .+|++|.+.|.
T Consensus        78 ~id~vi~~ag~   88 (242)
T TIGR01829        78 PIDVLVNNAGI   88 (242)
T ss_pred             CCcEEEECCCC
Confidence            79999998873

(R)-3-hydroxyacyl-CoA + NADP+ = 3-oxoacyl-CoA + NADPH. Members of this family may act in the biosynthesis of poly-beta-hydroxybutyrate (e.g. Rhizobium meliloti) and related poly-beta-hydroxyalkanoates. Note that the member of this family from Azospirillum brasilense, designated NodG, appears to lack acetoacetyl-CoA reductase activity and to act instead in the production of nodulation factor. This family is downgraded to subfamily for this NodG. Other proteins designated NodG, as from Rhizobium, belong to related but distinct protein families.

>TIGR02622 CDP_4_6_dhtase CDP-glucose 4,6-dehydratase

Probab=92.83  E-value=0.44  Score=43.79  Aligned_cols=77  Identities=17%  Similarity=0.110  Sum_probs=43.5

Q ss_pred             CCCEEEEEcC-CHHHHHHHHHHHHHCCCCeEEEEeCChhHHH-HHHHcCC--C-EEEeCCCCcccHHHHHHHHHHHhCCC
Q 017868          181 PETNVLIMGA-GPIGLVTMLGAPRAFGAPRIVIVDVDDYRLS-VAKEIGA--D-NIVKVSTNLQDIAEEVEKIQKAMGTG  255 (365)
Q Consensus       181 ~g~~vlI~G~-g~~G~~ai~~l~~~~g~~~vi~v~~~~~~~~-~~~~~g~--~-~~~~~~~~~~~~~~~i~~~~~~~~~~  255 (365)
                      +|.+|||+|+ |.+|.++++.++ ..|.+ |+++++++.... ..+.++.  . ..+..+-  .+. +.+.+..+  ..+
T Consensus         3 ~~k~ilItGatG~IG~~l~~~L~-~~G~~-V~~~~r~~~~~~~~~~~~~~~~~~~~~~~Dl--~~~-~~~~~~~~--~~~   75 (349)
T TIGR02622         3 QGKKVLVTGHTGFKGSWLSLWLL-ELGAE-VYGYSLDPPTSPNLFELLNLAKKIEDHFGDI--RDA-AKLRKAIA--EFK   75 (349)
T ss_pred             CCCEEEEECCCChhHHHHHHHHH-HCCCE-EEEEeCCCccchhHHHHHhhcCCceEEEccC--CCH-HHHHHHHh--hcC
Confidence            4678999987 999999999454 56884 666666554322 2222221  1 1122111  222 22333332  236


Q ss_pred             ceEEEeCCC
Q 017868          256 IDVSFDCAG  264 (365)
Q Consensus       256 ~d~vid~~g  264 (365)
                      +|+||.+++
T Consensus        76 ~d~vih~A~   84 (349)
T TIGR02622        76 PEIVFHLAA   84 (349)
T ss_pred             CCEEEECCc
Confidence            899999887

Members of this protein family are CDP-glucose 4,6-dehydratase from a variety of Gram-negative and Gram-positive bacteria. Members typically are encoded next to a gene that encodes a glucose-1-phosphate cytidylyltransferase, which produces the substrate, CDP-D-glucose, used by this enzyme to produce CDP-4-keto-6-deoxyglucose.

>PRK12809 putative oxidoreductase Fe-S binding subunit; Reviewed

Probab=92.81  E-value=0.56  Score=47.02  Aligned_cols=77  Identities=22%  Similarity=0.287  Sum_probs=50.7

Q ss_pred             CCCEEEEEcCCHHHHHHHHHHHHHCCCCeEEEEeCChh---------------------HHHHHHHcCCCEEEeCCCCcc
Q 017868          181 PETNVLIMGAGPIGLVTMLGAPRAFGAPRIVIVDVDDY---------------------RLSVAKEIGADNIVKVSTNLQ  239 (365)
Q Consensus       181 ~g~~vlI~G~g~~G~~ai~~l~~~~g~~~vi~v~~~~~---------------------~~~~~~~~g~~~~~~~~~~~~  239 (365)
                      .+++|+|+|+|+.|+.++. .++..|++ |++.+..+.                     +.++++++|++...+..- ..
T Consensus       309 ~~kkVaIIG~GpaGl~aA~-~L~~~G~~-Vtv~e~~~~~GG~l~~gip~~~l~~~~~~~~~~~~~~~Gv~~~~~~~v-~~  385 (639)
T PRK12809        309 RSEKVAVIGAGPAGLGCAD-ILARAGVQ-VDVFDRHPEIGGMLTFGIPPFKLDKTVLSQRREIFTAMGIDFHLNCEI-GR  385 (639)
T ss_pred             CCCEEEEECcCHHHHHHHH-HHHHcCCc-EEEEeCCCCCCCeeeccCCcccCCHHHHHHHHHHHHHCCeEEEcCCcc-CC
Confidence            4899999999999999999 66677995 666665542                     456778888765433211 11


Q ss_pred             cHHHHHHHHHHHhCCCceEEEeCCCCH
Q 017868          240 DIAEEVEKIQKAMGTGIDVSFDCAGLN  266 (365)
Q Consensus       240 ~~~~~i~~~~~~~~~~~d~vid~~g~~  266 (365)
                      +.  .+.+.    ...+|.||.++|..
T Consensus       386 ~~--~~~~l----~~~~DaV~latGa~  406 (639)
T PRK12809        386 DI--TFSDL----TSEYDAVFIGVGTY  406 (639)
T ss_pred             cC--CHHHH----HhcCCEEEEeCCCC
Confidence            11  11222    24689999999853

>PRK07889 enoyl-(acyl carrier protein) reductase; Provisional

Probab=92.80  E-value=1.5  Score=38.33  Aligned_cols=82  Identities=17%  Similarity=0.302  Sum_probs=46.2

Q ss_pred             CCCEEEEEcC---CHHHHHHHHHHHHHCCCCeEEEEeCCh--hH-HHHHHHcCCC-EEEeCCC-CcccHHHHHHHHHHHh
Q 017868          181 PETNVLIMGA---GPIGLVTMLGAPRAFGAPRIVIVDVDD--YR-LSVAKEIGAD-NIVKVST-NLQDIAEEVEKIQKAM  252 (365)
Q Consensus       181 ~g~~vlI~G~---g~~G~~ai~~l~~~~g~~~vi~v~~~~--~~-~~~~~~~g~~-~~~~~~~-~~~~~~~~i~~~~~~~  252 (365)
                      .+.++||+|+   +++|.++++.++ ..|+ +|+.++++.  +. .+..++++.. ..+..+- +.++....+.+..+. 
T Consensus         6 ~~k~~lItGa~~s~GIG~a~a~~la-~~G~-~v~l~~r~~~~~~~~~~~~~~~~~~~~~~~Dv~~~~~i~~~~~~~~~~-   82 (256)
T PRK07889          6 EGKRILVTGVITDSSIAFHVARVAQ-EQGA-EVVLTGFGRALRLTERIAKRLPEPAPVLELDVTNEEHLASLADRVREH-   82 (256)
T ss_pred             cCCEEEEeCCCCcchHHHHHHHHHH-HCCC-EEEEecCccchhHHHHHHHhcCCCCcEEeCCCCCHHHHHHHHHHHHHH-
Confidence            4678999985   689999999554 5699 466665432  32 2333444421 1222222 222333333333322 


Q ss_pred             CCCceEEEeCCCC
Q 017868          253 GTGIDVSFDCAGL  265 (365)
Q Consensus       253 ~~~~d~vid~~g~  265 (365)
                      .+++|++|.++|.
T Consensus        83 ~g~iD~li~nAG~   95 (256)
T PRK07889         83 VDGLDGVVHSIGF   95 (256)
T ss_pred             cCCCcEEEEcccc
Confidence            3579999998873

>smart00846 Gp_dh_N Glyceraldehyde 3-phosphate dehydrogenase, NAD binding domain

Probab=92.79  E-value=1.1  Score=35.56  Aligned_cols=100  Identities=23%  Similarity=0.271  Sum_probs=55.4

Q ss_pred             EEEEEcCCHHHHHHHHHHHHHCCCCeEEEEe-CChhHHHHHHH----cCC-CEEEeCCCC-------------cccHHHH
Q 017868          184 NVLIMGAGPIGLVTMLGAPRAFGAPRIVIVD-VDDYRLSVAKE----IGA-DNIVKVSTN-------------LQDIAEE  244 (365)
Q Consensus       184 ~vlI~G~g~~G~~ai~~l~~~~g~~~vi~v~-~~~~~~~~~~~----~g~-~~~~~~~~~-------------~~~~~~~  244 (365)
                      +|.|.|.|.+|..+++.+....+.+.+.+.+ .+.+....+-+    .|. ...+..++.             ..+. ..
T Consensus         2 kv~I~G~GriGr~v~~~~~~~~~~~lvai~d~~~~~~~a~ll~~Ds~hg~~~~~v~~~~~~l~i~g~~i~~~~~~~p-~~   80 (149)
T smart00846        2 KVGINGFGRIGRLVLRALLERPDIEVVAINDLTDPETLAHLLKYDSVHGRFPGEVEVDEDGLIVNGKKIKVLAERDP-AN   80 (149)
T ss_pred             EEEEECcCHHHHHHHHHHHhCCCCEEEEeecCCCHHHHHHHhcccCCCCCCCCcEEEeCCEEEECCEEEEEEecCCh-HH
Confidence            5788999999999888454455675444455 23444443333    221 111111110             0010 11


Q ss_pred             HHHHHHHhCCCceEEEeCCCCHHHHHHHHHhcccCCEEEEEccC
Q 017868          245 VEKIQKAMGTGIDVSFDCAGLNKTMSTALGATCAGGKVCLVGMG  288 (365)
Q Consensus       245 i~~~~~~~~~~~d~vid~~g~~~~~~~~~~~l~~~G~~~~~g~~  288 (365)
                      +. |.   ..++|+|+||+|.-.....+..++..+.+-++++.+
T Consensus        81 ~~-w~---~~gvDiVie~tG~f~~~~~~~~hl~~GakkViisap  120 (149)
T smart00846       81 LP-WK---ELGVDIVVECTGKFTTREKASAHLKAGAKKVIISAP  120 (149)
T ss_pred             Cc-cc---ccCCeEEEeccccccchHHHHHHHHcCCCEEEeCCC
Confidence            11 11   358999999999644445566788877777777543

GAPDH is a tetrameric NAD-binding enzyme involved in glycolysis and glyconeogenesis. N-terminal domain is a Rossmann NAD(P) binding fold.

>PLN00141 Tic62-NAD(P)-related group II protein; Provisional

Probab=92.79  E-value=1  Score=39.18  Aligned_cols=39  Identities=21%  Similarity=0.120  Sum_probs=28.5

Q ss_pred             CCCEEEEEcC-CHHHHHHHHHHHHHCCCCeEEEEeCChhHHH
Q 017868          181 PETNVLIMGA-GPIGLVTMLGAPRAFGAPRIVIVDVDDYRLS  221 (365)
Q Consensus       181 ~g~~vlI~G~-g~~G~~ai~~l~~~~g~~~vi~v~~~~~~~~  221 (365)
                      .+.+|||+|+ |.+|..++..++ ..|. .|+++.++.++..
T Consensus        16 ~~~~ilItGasG~iG~~l~~~L~-~~g~-~V~~~~R~~~~~~   55 (251)
T PLN00141         16 KTKTVFVAGATGRTGKRIVEQLL-AKGF-AVKAGVRDVDKAK   55 (251)
T ss_pred             cCCeEEEECCCcHHHHHHHHHHH-hCCC-EEEEEecCHHHHH
Confidence            3578999997 999999998454 4588 4666666666543

>COG3963 Phospholipid N-methyltransferase [Lipid metabolism]

Probab=92.78  E-value=4.3  Score=32.67  Aligned_cols=122  Identities=16%  Similarity=0.164  Sum_probs=75.8

Q ss_pred             hccch-hhHHHHHHHHhcCCCCCCEEEEEcCCHHHHHHHHHHHHHCCCCeEEEEeCChhHHHHH-HHcCCCEEEeCCCCc
Q 017868          161 GAMCE-PLSVGLHACRRANIGPETNVLIMGAGPIGLVTMLGAPRAFGAPRIVIVDVDDYRLSVA-KEIGADNIVKVSTNL  238 (365)
Q Consensus       161 a~~~~-~~~~a~~~~~~~~~~~g~~vlI~G~g~~G~~ai~~l~~~~g~~~vi~v~~~~~~~~~~-~~~g~~~~~~~~~~~  238 (365)
                      .+.+| ...+|-.++...+.+.|-.||-.|.|. |-..=.+|++...-+.+.+++.+.+=...+ +.+....+++  .+.
T Consensus        27 GaI~PsSs~lA~~M~s~I~pesglpVlElGPGT-GV~TkaIL~~gv~~~~L~~iE~~~dF~~~L~~~~p~~~ii~--gda  103 (194)
T COG3963          27 GAILPSSSILARKMASVIDPESGLPVLELGPGT-GVITKAILSRGVRPESLTAIEYSPDFVCHLNQLYPGVNIIN--GDA  103 (194)
T ss_pred             eeecCCcHHHHHHHHhccCcccCCeeEEEcCCc-cHhHHHHHhcCCCccceEEEEeCHHHHHHHHHhCCCccccc--cch
Confidence            34444 344555556667889999999998632 333334243444455777777776655444 4455555444  344


Q ss_pred             ccHHHHHHHHHHHhCCCceEEEeCCCC--------HHHHHHHHHhcccCCEEEEEccC
Q 017868          239 QDIAEEVEKIQKAMGTGIDVSFDCAGL--------NKTMSTALGATCAGGKVCLVGMG  288 (365)
Q Consensus       239 ~~~~~~i~~~~~~~~~~~d~vid~~g~--------~~~~~~~~~~l~~~G~~~~~g~~  288 (365)
                      .++...+.+.   .+..+|.||.+.--        -..++..+..++.+|.++.+..+
T Consensus       104 ~~l~~~l~e~---~gq~~D~viS~lPll~~P~~~~iaile~~~~rl~~gg~lvqftYg  158 (194)
T COG3963         104 FDLRTTLGEH---KGQFFDSVISGLPLLNFPMHRRIAILESLLYRLPAGGPLVQFTYG  158 (194)
T ss_pred             hhHHHHHhhc---CCCeeeeEEeccccccCcHHHHHHHHHHHHHhcCCCCeEEEEEec
Confidence            4444334333   36789999987652        24677888999999999988654

>PRK05855 short chain dehydrogenase; Validated

Probab=92.78  E-value=1.1  Score=44.19  Aligned_cols=82  Identities=23%  Similarity=0.290  Sum_probs=48.8

Q ss_pred             CCCEEEEEcC-CHHHHHHHHHHHHHCCCCeEEEEeCChhHHHHH----HHcCCC-EEEeCCC-CcccHHHHHHHHHHHhC
Q 017868          181 PETNVLIMGA-GPIGLVTMLGAPRAFGAPRIVIVDVDDYRLSVA----KEIGAD-NIVKVST-NLQDIAEEVEKIQKAMG  253 (365)
Q Consensus       181 ~g~~vlI~G~-g~~G~~ai~~l~~~~g~~~vi~v~~~~~~~~~~----~~~g~~-~~~~~~~-~~~~~~~~i~~~~~~~~  253 (365)
                      .+.++||+|+ |++|.++++.++ ..|++ |+.++++.++.+.+    +..|.. ..+..+- +.++..+.+.++.+. .
T Consensus       314 ~~~~~lv~G~s~giG~~~a~~l~-~~G~~-v~~~~r~~~~~~~~~~~~~~~~~~~~~~~~Dv~~~~~~~~~~~~~~~~-~  390 (582)
T PRK05855        314 SGKLVVVTGAGSGIGRETALAFA-REGAE-VVASDIDEAAAERTAELIRAAGAVAHAYRVDVSDADAMEAFAEWVRAE-H  390 (582)
T ss_pred             CCCEEEEECCcCHHHHHHHHHHH-HCCCE-EEEEeCCHHHHHHHHHHHHhcCCeEEEEEcCCCCHHHHHHHHHHHHHh-c
Confidence            4578999987 999999999554 56995 77777777655432    233432 1222222 222333333333322 3


Q ss_pred             CCceEEEeCCCC
Q 017868          254 TGIDVSFDCAGL  265 (365)
Q Consensus       254 ~~~d~vid~~g~  265 (365)
                      +++|++|.++|.
T Consensus       391 g~id~lv~~Ag~  402 (582)
T PRK05855        391 GVPDIVVNNAGI  402 (582)
T ss_pred             CCCcEEEECCcc
Confidence            579999999874

>PRK08220 2,3-dihydroxybenzoate-2,3-dehydrogenase; Validated

Probab=92.77  E-value=1.2  Score=38.62  Aligned_cols=77  Identities=18%  Similarity=0.249  Sum_probs=44.6

Q ss_pred             CCCEEEEEcC-CHHHHHHHHHHHHHCCCCeEEEEeCChhHHHHHHHcCCC-EEEeCCC-CcccHHHHHHHHHHHhCCCce
Q 017868          181 PETNVLIMGA-GPIGLVTMLGAPRAFGAPRIVIVDVDDYRLSVAKEIGAD-NIVKVST-NLQDIAEEVEKIQKAMGTGID  257 (365)
Q Consensus       181 ~g~~vlI~G~-g~~G~~ai~~l~~~~g~~~vi~v~~~~~~~~~~~~~g~~-~~~~~~~-~~~~~~~~i~~~~~~~~~~~d  257 (365)
                      .++++||+|+ |.+|..++..+ ...|+ .++.++++.     ....+.. ..+..+- +.+++.+.+.++.+. .+++|
T Consensus         7 ~~k~vlItGas~~iG~~la~~l-~~~G~-~v~~~~~~~-----~~~~~~~~~~~~~D~~~~~~~~~~~~~~~~~-~~~id   78 (252)
T PRK08220          7 SGKTVWVTGAAQGIGYAVALAF-VEAGA-KVIGFDQAF-----LTQEDYPFATFVLDVSDAAAVAQVCQRLLAE-TGPLD   78 (252)
T ss_pred             CCCEEEEeCCCchHHHHHHHHH-HHCCC-EEEEEecch-----hhhcCCceEEEEecCCCHHHHHHHHHHHHHH-cCCCC
Confidence            4678999987 89999999945 45698 566666654     1222221 1122221 223333333333322 35799


Q ss_pred             EEEeCCCC
Q 017868          258 VSFDCAGL  265 (365)
Q Consensus       258 ~vid~~g~  265 (365)
                      ++|.+.|.
T Consensus        79 ~vi~~ag~   86 (252)
T PRK08220         79 VLVNAAGI   86 (252)
T ss_pred             EEEECCCc
Confidence            99998874

>PRK06701 short chain dehydrogenase; Provisional

Probab=92.75  E-value=1.6  Score=38.99  Aligned_cols=83  Identities=19%  Similarity=0.189  Sum_probs=45.9

Q ss_pred             CCCCEEEEEcC-CHHHHHHHHHHHHHCCCCeEEEEeCChh-HH----HHHHHcCCCE-EEeCCCC-cccHHHHHHHHHHH
Q 017868          180 GPETNVLIMGA-GPIGLVTMLGAPRAFGAPRIVIVDVDDY-RL----SVAKEIGADN-IVKVSTN-LQDIAEEVEKIQKA  251 (365)
Q Consensus       180 ~~g~~vlI~G~-g~~G~~ai~~l~~~~g~~~vi~v~~~~~-~~----~~~~~~g~~~-~~~~~~~-~~~~~~~i~~~~~~  251 (365)
                      -++.++||+|+ |.+|..++..+++ .|++ |+.+.++++ ..    +.++..+... .+..+-. ..++...++++.+.
T Consensus        44 ~~~k~iLItGasggIG~~la~~l~~-~G~~-V~l~~r~~~~~~~~~~~~~~~~~~~~~~~~~Dl~~~~~~~~~~~~i~~~  121 (290)
T PRK06701         44 LKGKVALITGGDSGIGRAVAVLFAK-EGAD-IAIVYLDEHEDANETKQRVEKEGVKCLLIPGDVSDEAFCKDAVEETVRE  121 (290)
T ss_pred             CCCCEEEEeCCCcHHHHHHHHHHHH-CCCE-EEEEeCCcchHHHHHHHHHHhcCCeEEEEEccCCCHHHHHHHHHHHHHH
Confidence            35678999987 9999999995654 5985 555555432 11    2223333322 2222222 22333333333332


Q ss_pred             hCCCceEEEeCCCC
Q 017868          252 MGTGIDVSFDCAGL  265 (365)
Q Consensus       252 ~~~~~d~vid~~g~  265 (365)
                       .+++|++|.++|.
T Consensus       122 -~~~iD~lI~~Ag~  134 (290)
T PRK06701        122 -LGRLDILVNNAAF  134 (290)
T ss_pred             -cCCCCEEEECCcc
Confidence             3578999988773

>PRK11933 yebU rRNA (cytosine-C(5)-)-methyltransferase RsmF; Reviewed

Probab=92.74  E-value=2.8  Score=40.09  Aligned_cols=99  Identities=19%  Similarity=0.240  Sum_probs=61.4

Q ss_pred             CCCCCCEEEEEcCCHHHHHHHHHHHHHCC-CCeEEEEeCChhHHH----HHHHcCCCEEEeCCCCcccHHHHHHHHHHHh
Q 017868          178 NIGPETNVLIMGAGPIGLVTMLGAPRAFG-APRIVIVDVDDYRLS----VAKEIGADNIVKVSTNLQDIAEEVEKIQKAM  252 (365)
Q Consensus       178 ~~~~g~~vlI~G~g~~G~~ai~~l~~~~g-~~~vi~v~~~~~~~~----~~~~~g~~~~~~~~~~~~~~~~~i~~~~~~~  252 (365)
                      .+++|++||=..|++ |.-+.+ ++..++ -..+++.+.+..|.+    .++++|+..+.....+...+..    .   .
T Consensus       110 ~~~pg~~VLD~CAAP-GgKTt~-la~~l~~~g~lvA~D~~~~R~~~L~~nl~r~G~~nv~v~~~D~~~~~~----~---~  180 (470)
T PRK11933        110 DDNAPQRVLDMAAAP-GSKTTQ-IAALMNNQGAIVANEYSASRVKVLHANISRCGVSNVALTHFDGRVFGA----A---L  180 (470)
T ss_pred             CCCCCCEEEEeCCCc-cHHHHH-HHHHcCCCCEEEEEeCCHHHHHHHHHHHHHcCCCeEEEEeCchhhhhh----h---c
Confidence            678999988875433 333444 333433 237899999988864    4677898775544333222211    1   1


Q ss_pred             CCCceEEEe---CCCC-------------------------HHHHHHHHHhcccCCEEEEE
Q 017868          253 GTGIDVSFD---CAGL-------------------------NKTMSTALGATCAGGKVCLV  285 (365)
Q Consensus       253 ~~~~d~vid---~~g~-------------------------~~~~~~~~~~l~~~G~~~~~  285 (365)
                      ...||.|+-   |+|.                         ...+..++..|+++|+++..
T Consensus       181 ~~~fD~ILvDaPCSG~G~~rk~p~~~~~~s~~~v~~l~~lQ~~iL~~A~~~LkpGG~LVYS  241 (470)
T PRK11933        181 PETFDAILLDAPCSGEGTVRKDPDALKNWSPESNLEIAATQRELIESAFHALKPGGTLVYS  241 (470)
T ss_pred             hhhcCeEEEcCCCCCCcccccCHHHhhhCCHHHHHHHHHHHHHHHHHHHHHcCCCcEEEEE
Confidence            346888863   6663                         13555688899999998653

>COG1052 LdhA Lactate dehydrogenase and related dehydrogenases [Energy production and conversion / Coenzyme metabolism / General function prediction only]

Probab=92.72  E-value=2.5  Score=38.31  Aligned_cols=89  Identities=22%  Similarity=0.310  Sum_probs=59.7

Q ss_pred             CCCEEEEEcCCHHHHHHHHHHHHHCCCCeEEEEeCChhHHHHHHHcCCCEEEeCCCCcccHHHHHHHHHHHhCCCceEEE
Q 017868          181 PETNVLIMGAGPIGLVTMLGAPRAFGAPRIVIVDVDDYRLSVAKEIGADNIVKVSTNLQDIAEEVEKIQKAMGTGIDVSF  260 (365)
Q Consensus       181 ~g~~vlI~G~g~~G~~ai~~l~~~~g~~~vi~v~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~i~~~~~~~~~~~d~vi  260 (365)
                      .|.++.|.|.|.+|++.+. .++.+|. .|+..+++.. .+..+.+++..+        ++.+.+        ...|++.
T Consensus       145 ~gktvGIiG~GrIG~avA~-r~~~Fgm-~v~y~~~~~~-~~~~~~~~~~y~--------~l~ell--------~~sDii~  205 (324)
T COG1052         145 RGKTLGIIGLGRIGQAVAR-RLKGFGM-KVLYYDRSPN-PEAEKELGARYV--------DLDELL--------AESDIIS  205 (324)
T ss_pred             CCCEEEEECCCHHHHHHHH-HHhcCCC-EEEEECCCCC-hHHHhhcCceec--------cHHHHH--------HhCCEEE
Confidence            5899999999999999999 7779999 5777766655 444445554432        122222        3467775


Q ss_pred             e-CCCCHHHHH----HHHHhcccCCEEEEEccC
Q 017868          261 D-CAGLNKTMS----TALGATCAGGKVCLVGMG  288 (365)
Q Consensus       261 d-~~g~~~~~~----~~~~~l~~~G~~~~~g~~  288 (365)
                      - |..++++.+    ..+..|++++.++..+..
T Consensus       206 l~~Plt~~T~hLin~~~l~~mk~ga~lVNtaRG  238 (324)
T COG1052         206 LHCPLTPETRHLINAEELAKMKPGAILVNTARG  238 (324)
T ss_pred             EeCCCChHHhhhcCHHHHHhCCCCeEEEECCCc
Confidence            5 444444333    577889999988887654

>PRK07792 fabG 3-ketoacyl-(acyl-carrier-protein) reductase; Provisional

Probab=92.70  E-value=1.2  Score=40.06  Aligned_cols=81  Identities=25%  Similarity=0.364  Sum_probs=44.9

Q ss_pred             CCCEEEEEcC-CHHHHHHHHHHHHHCCCCeEEEEeCC-hhHH-HH---HHHcCCCEE-EeCCCC-cccHHHHHHHHHHHh
Q 017868          181 PETNVLIMGA-GPIGLVTMLGAPRAFGAPRIVIVDVD-DYRL-SV---AKEIGADNI-VKVSTN-LQDIAEEVEKIQKAM  252 (365)
Q Consensus       181 ~g~~vlI~G~-g~~G~~ai~~l~~~~g~~~vi~v~~~-~~~~-~~---~~~~g~~~~-~~~~~~-~~~~~~~i~~~~~~~  252 (365)
                      .+.++||+|+ +++|.+.++.++ ..|++ |+.+++. .++. +.   ++..|.... +..+-. .++....+....+  
T Consensus        11 ~~k~~lVTGas~gIG~~ia~~L~-~~Ga~-Vv~~~~~~~~~~~~~~~~i~~~g~~~~~~~~Dv~d~~~~~~~~~~~~~--   86 (306)
T PRK07792         11 SGKVAVVTGAAAGLGRAEALGLA-RLGAT-VVVNDVASALDASDVLDEIRAAGAKAVAVAGDISQRATADELVATAVG--   86 (306)
T ss_pred             CCCEEEEECCCChHHHHHHHHHH-HCCCE-EEEecCCchhHHHHHHHHHHhcCCeEEEEeCCCCCHHHHHHHHHHHHH--
Confidence            4678999987 999999999555 55995 5555543 2222 22   233343221 211111 1222223333323  


Q ss_pred             CCCceEEEeCCCC
Q 017868          253 GTGIDVSFDCAGL  265 (365)
Q Consensus       253 ~~~~d~vid~~g~  265 (365)
                      -+++|++|.++|.
T Consensus        87 ~g~iD~li~nAG~   99 (306)
T PRK07792         87 LGGLDIVVNNAGI   99 (306)
T ss_pred             hCCCCEEEECCCC
Confidence            3589999998873

>PRK06407 ornithine cyclodeaminase; Provisional

Probab=92.67  E-value=3.8  Score=36.83  Aligned_cols=97  Identities=15%  Similarity=0.132  Sum_probs=65.6

Q ss_pred             CCCCEEEEEcCCHHHHHHHHHHHHHCCCCeEEEEeCChhHHH-HHHHc----CCCEEEeCCCCcccHHHHHHHHHHHhCC
Q 017868          180 GPETNVLIMGAGPIGLVTMLGAPRAFGAPRIVIVDVDDYRLS-VAKEI----GADNIVKVSTNLQDIAEEVEKIQKAMGT  254 (365)
Q Consensus       180 ~~g~~vlI~G~g~~G~~ai~~l~~~~g~~~vi~v~~~~~~~~-~~~~~----g~~~~~~~~~~~~~~~~~i~~~~~~~~~  254 (365)
                      +...++.|.|+|.-+.+-++.++...+.+.|.+.+++.++.+ +++++    |... ...    .+..+.+        .
T Consensus       115 ~da~~l~iiGaG~QA~~~~~a~~~v~~i~~v~v~~r~~~~a~~f~~~~~~~~~~~v-~~~----~~~~eav--------~  181 (301)
T PRK06407        115 KNVENFTIIGSGFQAETQLEGMASVYNPKRIRVYSRNFDHARAFAERFSKEFGVDI-RPV----DNAEAAL--------R  181 (301)
T ss_pred             cCCcEEEEECCcHHHHHHHHHHHhcCCCCEEEEECCCHHHHHHHHHHHHHhcCCcE-EEe----CCHHHHH--------h
Confidence            455778889999999988886777788999999999988754 44443    4322 221    1222222        5


Q ss_pred             CceEEEeCCCCHHHHHHHHHhcccCCEEEEEccCCC
Q 017868          255 GIDVSFDCAGLNKTMSTALGATCAGGKVCLVGMGHH  290 (365)
Q Consensus       255 ~~d~vid~~g~~~~~~~~~~~l~~~G~~~~~g~~~~  290 (365)
                      +.|+|+-++.+...+ .....++++-+++.+|...+
T Consensus       182 ~aDIV~taT~s~~P~-~~~~~l~pg~hV~aiGs~~p  216 (301)
T PRK06407        182 DADTITSITNSDTPI-FNRKYLGDEYHVNLAGSNYP  216 (301)
T ss_pred             cCCEEEEecCCCCcE-ecHHHcCCCceEEecCCCCC
Confidence            799999988765321 23457889888888886544

>COG1086 Predicted nucleoside-diphosphate sugar epimerases [Cell envelope biogenesis, outer membrane / Carbohydrate transport and metabolism]

Probab=92.65  E-value=0.9  Score=43.68  Aligned_cols=81  Identities=21%  Similarity=0.343  Sum_probs=52.7

Q ss_pred             CCCCEEEEEcC-CHHHHHHHHHHHHHCCCCeEEEEeCChhHHHHH-----HHcCCCEEEeCCCCcccHHHHHHHHHHHhC
Q 017868          180 GPETNVLIMGA-GPIGLVTMLGAPRAFGAPRIVIVDVDDYRLSVA-----KEIGADNIVKVSTNLQDIAEEVEKIQKAMG  253 (365)
Q Consensus       180 ~~g~~vlI~G~-g~~G~~ai~~l~~~~g~~~vi~v~~~~~~~~~~-----~~~g~~~~~~~~~~~~~~~~~i~~~~~~~~  253 (365)
                      -.|++|||+|+ |++|...+..+++. +.+.++..+.++.+...+     +.++......+-.+-.|.. .+.+..+  +
T Consensus       248 ~~gK~vLVTGagGSiGsel~~qil~~-~p~~i~l~~~~E~~~~~i~~el~~~~~~~~~~~~igdVrD~~-~~~~~~~--~  323 (588)
T COG1086         248 LTGKTVLVTGGGGSIGSELCRQILKF-NPKEIILFSRDEYKLYLIDMELREKFPELKLRFYIGDVRDRD-RVERAME--G  323 (588)
T ss_pred             cCCCEEEEeCCCCcHHHHHHHHHHhc-CCCEEEEecCchHHHHHHHHHHHhhCCCcceEEEecccccHH-HHHHHHh--c
Confidence            37899999987 99999888867766 888999999988776433     3333222221112223332 3333333  5


Q ss_pred             CCceEEEeCCC
Q 017868          254 TGIDVSFDCAG  264 (365)
Q Consensus       254 ~~~d~vid~~g  264 (365)
                      .++|+||.++.
T Consensus       324 ~kvd~VfHAAA  334 (588)
T COG1086         324 HKVDIVFHAAA  334 (588)
T ss_pred             CCCceEEEhhh
Confidence            68999999775

>PRK06171 sorbitol-6-phosphate 2-dehydrogenase; Provisional

Probab=92.65  E-value=0.76  Score=40.24  Aligned_cols=77  Identities=21%  Similarity=0.222  Sum_probs=44.6

Q ss_pred             CCCEEEEEcC-CHHHHHHHHHHHHHCCCCeEEEEeCChhHHHHHHHcCCCEEEeCCC-CcccHHHHHHHHHHHhCCCceE
Q 017868          181 PETNVLIMGA-GPIGLVTMLGAPRAFGAPRIVIVDVDDYRLSVAKEIGADNIVKVST-NLQDIAEEVEKIQKAMGTGIDV  258 (365)
Q Consensus       181 ~g~~vlI~G~-g~~G~~ai~~l~~~~g~~~vi~v~~~~~~~~~~~~~g~~~~~~~~~-~~~~~~~~i~~~~~~~~~~~d~  258 (365)
                      .+.++||+|+ |++|.++++ .+...|+ .|+.+++++++.+.   .... .+..+- +.+++.+.+....+. -+++|+
T Consensus         8 ~~k~vlItG~s~gIG~~la~-~l~~~G~-~v~~~~~~~~~~~~---~~~~-~~~~D~~~~~~~~~~~~~~~~~-~g~id~   80 (266)
T PRK06171          8 QGKIIIVTGGSSGIGLAIVK-ELLANGA-NVVNADIHGGDGQH---ENYQ-FVPTDVSSAEEVNHTVAEIIEK-FGRIDG   80 (266)
T ss_pred             CCCEEEEeCCCChHHHHHHH-HHHHCCC-EEEEEeCCcccccc---CceE-EEEccCCCHHHHHHHHHHHHHH-cCCCCE
Confidence            4678999987 999999999 4456698 56666665544221   1111 111111 223333334333332 357999


Q ss_pred             EEeCCC
Q 017868          259 SFDCAG  264 (365)
Q Consensus       259 vid~~g  264 (365)
                      +|.+.|
T Consensus        81 li~~Ag   86 (266)
T PRK06171         81 LVNNAG   86 (266)
T ss_pred             EEECCc
Confidence            999887

>PRK08223 hypothetical protein; Validated

Probab=92.63  E-value=0.35  Score=42.74  Aligned_cols=35  Identities=29%  Similarity=0.507  Sum_probs=28.7

Q ss_pred             CCCEEEEEcCCHHHHHHHHHHHHHCCCCeEEEEeCC
Q 017868          181 PETNVLIMGAGPIGLVTMLGAPRAFGAPRIVIVDVD  216 (365)
Q Consensus       181 ~g~~vlI~G~g~~G~~ai~~l~~~~g~~~vi~v~~~  216 (365)
                      ...+|||.|+|++|..+++ .+.+.|...+..+|.+
T Consensus        26 ~~s~VlIvG~GGLGs~va~-~LA~aGVG~i~lvD~D   60 (287)
T PRK08223         26 RNSRVAIAGLGGVGGIHLL-TLARLGIGKFTIADFD   60 (287)
T ss_pred             hcCCEEEECCCHHHHHHHH-HHHHhCCCeEEEEeCC
Confidence            4468999999999999999 5556699888888654

>TIGR01138 cysM cysteine synthase B

Probab=92.62  E-value=6.4  Score=35.14  Aligned_cols=58  Identities=17%  Similarity=0.260  Sum_probs=44.1

Q ss_pred             HHhcCCCCCCEEEEEcCCHHHHHHHHHHHHHCCCCeEEEEeC--ChhHHHHHHHcCCCEEE
Q 017868          174 CRRANIGPETNVLIMGAGPIGLVTMLGAPRAFGAPRIVIVDV--DDYRLSVAKEIGADNIV  232 (365)
Q Consensus       174 ~~~~~~~~g~~vlI~G~g~~G~~ai~~l~~~~g~~~vi~v~~--~~~~~~~~~~~g~~~~~  232 (365)
                      .+...+.++++|+...+|..|.+++. +++.+|.+.++.+..  ++.|.+.++.+|+.-+.
T Consensus        51 ~~~g~~~~g~~vv~aSsGN~g~alA~-~a~~~G~~~~i~~p~~~~~~k~~~~~~~GA~v~~  110 (290)
T TIGR01138        51 EKRGEIKPGDVLIEATSGNTGIALAM-IAALKGYRMKLLMPDNMSQERKAAMRAYGAELIL  110 (290)
T ss_pred             HHcCCCCCCCEEEEECCChHHHHHHH-HHHHcCCeEEEEECCCCCHHHHHHHHHcCCEEEE
Confidence            34556677877666566999999999 999999987777754  35788889999987543

Alternate name: O-acetylserine (thiol)-lyase

>PRK05565 fabG 3-ketoacyl-(acyl-carrier-protein) reductase; Provisional

Probab=92.61  E-value=0.95  Score=38.96  Aligned_cols=81  Identities=28%  Similarity=0.362  Sum_probs=44.8

Q ss_pred             CCEEEEEcC-CHHHHHHHHHHHHHCCCCeEEEE-eCChhHHHH-HHH---cCCCE-EEeCCCC-cccHHHHHHHHHHHhC
Q 017868          182 ETNVLIMGA-GPIGLVTMLGAPRAFGAPRIVIV-DVDDYRLSV-AKE---IGADN-IVKVSTN-LQDIAEEVEKIQKAMG  253 (365)
Q Consensus       182 g~~vlI~G~-g~~G~~ai~~l~~~~g~~~vi~v-~~~~~~~~~-~~~---~g~~~-~~~~~~~-~~~~~~~i~~~~~~~~  253 (365)
                      +.++||+|+ |.+|..++..++ ..|++ ++.+ +++.++.+. ...   .+... ++..+-. .+++...+..+.+. .
T Consensus         5 ~~~ilI~Gasg~iG~~la~~l~-~~g~~-v~~~~~r~~~~~~~~~~~~~~~~~~~~~~~~D~~~~~~~~~~~~~~~~~-~   81 (247)
T PRK05565          5 GKVAIVTGASGGIGRAIAELLA-KEGAK-VVIAYDINEEAAQELLEEIKEEGGDAIAVKADVSSEEDVENLVEQIVEK-F   81 (247)
T ss_pred             CCEEEEeCCCcHHHHHHHHHHH-HCCCE-EEEEcCCCHHHHHHHHHHHHhcCCeEEEEECCCCCHHHHHHHHHHHHHH-h
Confidence            468999987 999999998554 55985 5555 666655432 222   22211 2222211 12222333333222 2


Q ss_pred             CCceEEEeCCCC
Q 017868          254 TGIDVSFDCAGL  265 (365)
Q Consensus       254 ~~~d~vid~~g~  265 (365)
                      +++|++|.+.|.
T Consensus        82 ~~id~vi~~ag~   93 (247)
T PRK05565         82 GKIDILVNNAGI   93 (247)
T ss_pred             CCCCEEEECCCc
Confidence            479999998873

>PRK13256 thiopurine S-methyltransferase; Reviewed

Probab=92.58  E-value=1  Score=38.41  Aligned_cols=102  Identities=12%  Similarity=0.110  Sum_probs=60.4

Q ss_pred             cCCCCCCEEEEEcCCHHHHHHHHHHHHHCCCCeEEEEeCChhHHHHHHH-cCCCE---------------EEeCCCCccc
Q 017868          177 ANIGPETNVLIMGAGPIGLVTMLGAPRAFGAPRIVIVDVDDYRLSVAKE-IGADN---------------IVKVSTNLQD  240 (365)
Q Consensus       177 ~~~~~g~~vlI~G~g~~G~~ai~~l~~~~g~~~vi~v~~~~~~~~~~~~-~g~~~---------------~~~~~~~~~~  240 (365)
                      ....++.+|||-|+|. |.-++- |+. .|+ .|++++-++...+.+.+ .+...               +..+..+-.+
T Consensus        39 l~~~~~~rvLvPgCGk-g~D~~~-LA~-~G~-~V~GvDlS~~Ai~~~~~e~~~~~~~~~~~~~~~~~~~~i~~~~gD~f~  114 (226)
T PRK13256         39 LNINDSSVCLIPMCGC-SIDMLF-FLS-KGV-KVIGIELSEKAVLSFFSQNTINYEVIHGNDYKLYKGDDIEIYVADIFN  114 (226)
T ss_pred             cCCCCCCeEEEeCCCC-hHHHHH-HHh-CCC-cEEEEecCHHHHHHHHHHcCCCcceecccccceeccCceEEEEccCcC
Confidence            3445678999999875 666666 654 599 59999999987776533 32221               1111111111


Q ss_pred             HHHHHHHHHHHhCCCceEEEeCCC----C----HHHHHHHHHhcccCCEEEEEcc
Q 017868          241 IAEEVEKIQKAMGTGIDVSFDCAG----L----NKTMSTALGATCAGGKVCLVGM  287 (365)
Q Consensus       241 ~~~~i~~~~~~~~~~~d~vid~~g----~----~~~~~~~~~~l~~~G~~~~~g~  287 (365)
                      +..     .....+.+|.|+|..-    .    .....++.+.|+++|+++.+..
T Consensus       115 l~~-----~~~~~~~fD~VyDra~~~Alpp~~R~~Y~~~l~~lL~pgg~llll~~  164 (226)
T PRK13256        115 LPK-----IANNLPVFDIWYDRGAYIALPNDLRTNYAKMMLEVCSNNTQILLLVM  164 (226)
T ss_pred             CCc-----cccccCCcCeeeeehhHhcCCHHHHHHHHHHHHHHhCCCcEEEEEEE
Confidence            100     0001247999999443    1    2344567788999999988754

>PRK07102 short chain dehydrogenase; Provisional

Probab=92.55  E-value=0.97  Score=38.97  Aligned_cols=37  Identities=32%  Similarity=0.392  Sum_probs=28.4

Q ss_pred             CEEEEEcC-CHHHHHHHHHHHHHCCCCeEEEEeCChhHHH
Q 017868          183 TNVLIMGA-GPIGLVTMLGAPRAFGAPRIVIVDVDDYRLS  221 (365)
Q Consensus       183 ~~vlI~G~-g~~G~~ai~~l~~~~g~~~vi~v~~~~~~~~  221 (365)
                      .+++|+|+ |++|..+++.++ ..|+ .|+++++++++.+
T Consensus         2 ~~vlItGas~giG~~~a~~l~-~~G~-~Vi~~~r~~~~~~   39 (243)
T PRK07102          2 KKILIIGATSDIARACARRYA-AAGA-RLYLAARDVERLE   39 (243)
T ss_pred             cEEEEEcCCcHHHHHHHHHHH-hcCC-EEEEEeCCHHHHH
Confidence            47899987 999999999555 5588 5777777776554

>PRK06123 short chain dehydrogenase; Provisional

Probab=92.54  E-value=1.5  Score=37.90  Aligned_cols=82  Identities=21%  Similarity=0.224  Sum_probs=45.2

Q ss_pred             CCEEEEEcC-CHHHHHHHHHHHHHCCCCeEEEEeCChhHHH-H---HHHcCCCE-EEeCCC-CcccHHHHHHHHHHHhCC
Q 017868          182 ETNVLIMGA-GPIGLVTMLGAPRAFGAPRIVIVDVDDYRLS-V---AKEIGADN-IVKVST-NLQDIAEEVEKIQKAMGT  254 (365)
Q Consensus       182 g~~vlI~G~-g~~G~~ai~~l~~~~g~~~vi~v~~~~~~~~-~---~~~~g~~~-~~~~~~-~~~~~~~~i~~~~~~~~~  254 (365)
                      +.++||+|+ |.+|..+++.++ ..|+.+++...+++++.+ .   +++.+... .+..+- +..++.+.+.++.+. .+
T Consensus         2 ~~~~lVtG~~~~iG~~~a~~l~-~~G~~vv~~~~~~~~~~~~~~~~l~~~~~~~~~~~~Dl~~~~~~~~~~~~~~~~-~~   79 (248)
T PRK06123          2 RKVMIITGASRGIGAATALLAA-ERGYAVCLNYLRNRDAAEAVVQAIRRQGGEALAVAADVADEADVLRLFEAVDRE-LG   79 (248)
T ss_pred             CCEEEEECCCchHHHHHHHHHH-HCCCeEEEecCCCHHHHHHHHHHHHhCCCcEEEEEeccCCHHHHHHHHHHHHHH-hC
Confidence            357899987 999999999555 558854443334443332 2   23334322 222221 223344444443332 35


Q ss_pred             CceEEEeCCCC
Q 017868          255 GIDVSFDCAGL  265 (365)
Q Consensus       255 ~~d~vid~~g~  265 (365)
                      ++|++|.+.|.
T Consensus        80 ~id~li~~ag~   90 (248)
T PRK06123         80 RLDALVNNAGI   90 (248)
T ss_pred             CCCEEEECCCC
Confidence            78999998873

>KOG1611 consensus Predicted short chain-type dehydrogenase [General function prediction only]

Probab=92.53  E-value=0.36  Score=40.63  Aligned_cols=82  Identities=22%  Similarity=0.270  Sum_probs=53.2

Q ss_pred             CEEEEEcC-CHHHHHHHHHHHHHCCCCeEEEEeCChhH-HHHHHHcC-C---CEEEeCC-CCcccHHHHHHHHHHH-hCC
Q 017868          183 TNVLIMGA-GPIGLVTMLGAPRAFGAPRIVIVDVDDYR-LSVAKEIG-A---DNIVKVS-TNLQDIAEEVEKIQKA-MGT  254 (365)
Q Consensus       183 ~~vlI~G~-g~~G~~ai~~l~~~~g~~~vi~v~~~~~~-~~~~~~~g-~---~~~~~~~-~~~~~~~~~i~~~~~~-~~~  254 (365)
                      .+++|+|+ -++|+-.++.+.+..|..+++++.++.++ .+.++... .   -+++.++ ..+++..+...+..+. ...
T Consensus         4 ksv~ItGaNRGIGlgLVk~llk~~~i~~iiat~r~~e~a~~~l~~k~~~d~rvHii~Ldvt~deS~~~~~~~V~~iVg~~   83 (249)
T KOG1611|consen    4 KSVFITGANRGIGLGLVKELLKDKGIEVIIATARDPEKAATELALKSKSDSRVHIIQLDVTCDESIDNFVQEVEKIVGSD   83 (249)
T ss_pred             ccEEEeccCcchhHHHHHHHhcCCCcEEEEEecCChHHhhHHHHHhhccCCceEEEEEecccHHHHHHHHHHHHhhcccC
Confidence            45999998 89999999889899999888888887777 33333322 1   1122111 2334444444444332 257


Q ss_pred             CceEEEeCCC
Q 017868          255 GIDVSFDCAG  264 (365)
Q Consensus       255 ~~d~vid~~g  264 (365)
                      |.|+.+.++|
T Consensus        84 GlnlLinNaG   93 (249)
T KOG1611|consen   84 GLNLLINNAG   93 (249)
T ss_pred             CceEEEeccc
Confidence            8999999887

>PRK14902 16S rRNA methyltransferase B; Provisional

Probab=92.49  E-value=2.8  Score=40.03  Aligned_cols=102  Identities=21%  Similarity=0.298  Sum_probs=59.5

Q ss_pred             HhcCCCCCCEEEEEcCCHHHHHHHHHHHHHC-CCCeEEEEeCChhHHHHH----HHcCCCEEEeCCCCcccHHHHHHHHH
Q 017868          175 RRANIGPETNVLIMGAGPIGLVTMLGAPRAF-GAPRIVIVDVDDYRLSVA----KEIGADNIVKVSTNLQDIAEEVEKIQ  249 (365)
Q Consensus       175 ~~~~~~~g~~vlI~G~g~~G~~ai~~l~~~~-g~~~vi~v~~~~~~~~~~----~~~g~~~~~~~~~~~~~~~~~i~~~~  249 (365)
                      ...+++++++||=.|+|+ |..++. +++.. +...+++++.++++.+.+    +++|...+.....+..++.   ..+ 
T Consensus       244 ~~l~~~~g~~VLDlgaG~-G~~t~~-la~~~~~~~~v~avDi~~~~l~~~~~n~~~~g~~~v~~~~~D~~~~~---~~~-  317 (444)
T PRK14902        244 PALDPKGGDTVLDACAAP-GGKTTH-IAELLKNTGKVVALDIHEHKLKLIEENAKRLGLTNIETKALDARKVH---EKF-  317 (444)
T ss_pred             HHhCCCCCCEEEEeCCCC-CHHHHH-HHHHhCCCCEEEEEeCCHHHHHHHHHHHHHcCCCeEEEEeCCccccc---chh-
Confidence            345678899888887533 333444 44443 234799999999876554    4567654322222221111   111 


Q ss_pred             HHhCCCceEEEe---CCCC-------------------------HHHHHHHHHhcccCCEEEEE
Q 017868          250 KAMGTGIDVSFD---CAGL-------------------------NKTMSTALGATCAGGKVCLV  285 (365)
Q Consensus       250 ~~~~~~~d~vid---~~g~-------------------------~~~~~~~~~~l~~~G~~~~~  285 (365)
                         ...+|.|+-   |+|.                         ...+..+.+.|+++|+++..
T Consensus       318 ---~~~fD~Vl~D~Pcsg~G~~~~~p~~~~~~~~~~~~~l~~~q~~iL~~a~~~LkpGG~lvys  378 (444)
T PRK14902        318 ---AEKFDKILVDAPCSGLGVIRRKPDIKYNKTKEDIESLQEIQLEILESVAQYLKKGGILVYS  378 (444)
T ss_pred             ---cccCCEEEEcCCCCCCeeeccCcchhhcCCHHHHHHHHHHHHHHHHHHHHHcCCCCEEEEE
Confidence               256899864   3332                         12456788899999998854

>PRK10901 16S rRNA methyltransferase B; Provisional

Probab=92.43  E-value=2.7  Score=39.88  Aligned_cols=103  Identities=19%  Similarity=0.189  Sum_probs=59.8

Q ss_pred             HhcCCCCCCEEEEEcCCHHHHHHHHHHHHHCCCCeEEEEeCChhHHHHH----HHcCCCEEEeCCCCcccHHHHHHHHHH
Q 017868          175 RRANIGPETNVLIMGAGPIGLVTMLGAPRAFGAPRIVIVDVDDYRLSVA----KEIGADNIVKVSTNLQDIAEEVEKIQK  250 (365)
Q Consensus       175 ~~~~~~~g~~vlI~G~g~~G~~ai~~l~~~~g~~~vi~v~~~~~~~~~~----~~~g~~~~~~~~~~~~~~~~~i~~~~~  250 (365)
                      ....+++|++||=.|+|+ |..+.. +++..+...+++++.++++.+.+    +.+|....+. ..+..++.    .+. 
T Consensus       238 ~~l~~~~g~~VLDlgaG~-G~~t~~-la~~~~~~~v~a~D~s~~~l~~~~~n~~~~g~~~~~~-~~D~~~~~----~~~-  309 (427)
T PRK10901        238 TLLAPQNGERVLDACAAP-GGKTAH-ILELAPQAQVVALDIDAQRLERVRENLQRLGLKATVI-VGDARDPA----QWW-  309 (427)
T ss_pred             HHcCCCCCCEEEEeCCCC-ChHHHH-HHHHcCCCEEEEEeCCHHHHHHHHHHHHHcCCCeEEE-EcCcccch----hhc-
Confidence            445678999988887643 334444 44444324799999999876554    4455532211 11111111    110 


Q ss_pred             HhCCCceEEEe---CCCC-------------------------HHHHHHHHHhcccCCEEEEEc
Q 017868          251 AMGTGIDVSFD---CAGL-------------------------NKTMSTALGATCAGGKVCLVG  286 (365)
Q Consensus       251 ~~~~~~d~vid---~~g~-------------------------~~~~~~~~~~l~~~G~~~~~g  286 (365)
                       ....+|.|+-   |.+.                         ...+..+.+.|++||+++...
T Consensus       310 -~~~~fD~Vl~D~Pcs~~G~~~~~p~~~~~~~~~~l~~l~~~q~~iL~~a~~~LkpGG~lvyst  372 (427)
T PRK10901        310 -DGQPFDRILLDAPCSATGVIRRHPDIKWLRRPEDIAALAALQSEILDALWPLLKPGGTLLYAT  372 (427)
T ss_pred             -ccCCCCEEEECCCCCcccccccCccccccCCHHHHHHHHHHHHHHHHHHHHhcCCCCEEEEEe
Confidence             1356999873   3331                         135667888999999988653

>PRK00258 aroE shikimate 5-dehydrogenase; Reviewed

Probab=92.41  E-value=0.44  Score=42.29  Aligned_cols=113  Identities=20%  Similarity=0.165  Sum_probs=65.5

Q ss_pred             CCCCEEEEEcCCHHHHHHHHHHHHHCCCCeEEEEeCChhHHHH-HHHcCCCEEEeCCCCcccHHHHHHHHHHHhCCCceE
Q 017868          180 GPETNVLIMGAGPIGLVTMLGAPRAFGAPRIVIVDVDDYRLSV-AKEIGADNIVKVSTNLQDIAEEVEKIQKAMGTGIDV  258 (365)
Q Consensus       180 ~~g~~vlI~G~g~~G~~ai~~l~~~~g~~~vi~v~~~~~~~~~-~~~~g~~~~~~~~~~~~~~~~~i~~~~~~~~~~~d~  258 (365)
                      ..+.++||+|+|++|.+++. .+...|+..|.++.++.++.+. ++.++....+.+.   .+.    .+    .-..+|+
T Consensus       121 ~~~k~vlVlGaGg~a~ai~~-aL~~~g~~~V~v~~R~~~~a~~l~~~~~~~~~~~~~---~~~----~~----~~~~~Di  188 (278)
T PRK00258        121 LKGKRILILGAGGAARAVIL-PLLDLGVAEITIVNRTVERAEELAKLFGALGKAELD---LEL----QE----ELADFDL  188 (278)
T ss_pred             CCCCEEEEEcCcHHHHHHHH-HHHHcCCCEEEEEeCCHHHHHHHHHHhhhccceeec---ccc----hh----ccccCCE
Confidence            45678999999999999999 6667897688888888877654 4455422101110   011    01    1257999


Q ss_pred             EEeCCCCHHHH-----HHHHHhcccCCEEEEEccCCCCccccchHhhhcCcE
Q 017868          259 SFDCAGLNKTM-----STALGATCAGGKVCLVGMGHHEMTVPLTPAAVREVD  305 (365)
Q Consensus       259 vid~~g~~~~~-----~~~~~~l~~~G~~~~~g~~~~~~~~~~~~~~~~~~~  305 (365)
                      ||+|+.....-     ......+.+...++.+-.. +..+......-.++..
T Consensus       189 vInaTp~g~~~~~~~~~~~~~~l~~~~~v~DivY~-P~~T~ll~~A~~~G~~  239 (278)
T PRK00258        189 IINATSAGMSGELPLPPLPLSLLRPGTIVYDMIYG-PLPTPFLAWAKAQGAR  239 (278)
T ss_pred             EEECCcCCCCCCCCCCCCCHHHcCCCCEEEEeecC-CCCCHHHHHHHHCcCe
Confidence            99998743210     1223456666666655432 2223333444444443

>COG0623 FabI Enoyl-[acyl-carrier-protein]

Probab=92.36  E-value=5.1  Score=34.06  Aligned_cols=108  Identities=18%  Similarity=0.150  Sum_probs=67.7

Q ss_pred             CCCCCEEEEEc-C--CHHHHHHHHHHHHHCCCCeEEEEeCCh--hH-HHHHHHcCCCEEEeCCCCcccHHHHHHHHHHHh
Q 017868          179 IGPETNVLIMG-A--GPIGLVTMLGAPRAFGAPRIVIVDVDD--YR-LSVAKEIGADNIVKVSTNLQDIAEEVEKIQKAM  252 (365)
Q Consensus       179 ~~~g~~vlI~G-~--g~~G~~ai~~l~~~~g~~~vi~v~~~~--~~-~~~~~~~g~~~~~~~~~~~~~~~~~i~~~~~~~  252 (365)
                      .-.|++.||.| +  -+++-..++ .++..|++..++...+.  +| .+++++++.+.++..+-.++.-.+.+-+..+..
T Consensus         3 ~L~GK~~lI~Gvan~rSIAwGIAk-~l~~~GAeL~fTy~~e~l~krv~~la~~~~s~~v~~cDV~~d~~i~~~f~~i~~~   81 (259)
T COG0623           3 LLEGKRILIMGVANNRSIAWGIAK-ALAEQGAELAFTYQGERLEKRVEELAEELGSDLVLPCDVTNDESIDALFATIKKK   81 (259)
T ss_pred             ccCCceEEEEEecccccHHHHHHH-HHHHcCCEEEEEeccHHHHHHHHHHHhhccCCeEEecCCCCHHHHHHHHHHHHHh
Confidence            34689999997 3  568888888 77888997555543221  22 357788888776655433333223232222334


Q ss_pred             CCCceEEEeCCCCH-----------------------------HHHHHHHHhcccCCEEEEEcc
Q 017868          253 GTGIDVSFDCAGLN-----------------------------KTMSTALGATCAGGKVCLVGM  287 (365)
Q Consensus       253 ~~~~d~vid~~g~~-----------------------------~~~~~~~~~l~~~G~~~~~g~  287 (365)
                      .+++|.++.+++-.                             .....+...|+++|.++.+..
T Consensus        82 ~g~lD~lVHsIaFa~k~el~G~~~dtsre~f~~a~~IS~YS~~~lak~a~~lM~~ggSiltLtY  145 (259)
T COG0623          82 WGKLDGLVHSIAFAPKEELKGDYLDTSREGFLIAMDISAYSFTALAKAARPLMNNGGSILTLTY  145 (259)
T ss_pred             hCcccEEEEEeccCChHHhCCcccccCHHHHHhHhhhhHhhHHHHHHHHHHhcCCCCcEEEEEe
Confidence            67899999877621                             123345667889999988764

>PRK14027 quinate/shikimate dehydrogenase; Provisional

Probab=92.34  E-value=0.46  Score=42.26  Aligned_cols=46  Identities=24%  Similarity=0.362  Sum_probs=36.5

Q ss_pred             CCCCEEEEEcCCHHHHHHHHHHHHHCCCCeEEEEeCChhHHHHH-HHc
Q 017868          180 GPETNVLIMGAGPIGLVTMLGAPRAFGAPRIVIVDVDDYRLSVA-KEI  226 (365)
Q Consensus       180 ~~g~~vlI~G~g~~G~~ai~~l~~~~g~~~vi~v~~~~~~~~~~-~~~  226 (365)
                      ..+.++||.|+|+.+.+++. .+...|++.+..+.++.+|.+.+ +.+
T Consensus       125 ~~~k~vlilGaGGaarAi~~-aL~~~g~~~i~i~nR~~~ka~~La~~~  171 (283)
T PRK14027        125 AKLDSVVQVGAGGVGNAVAY-ALVTHGVQKLQVADLDTSRAQALADVI  171 (283)
T ss_pred             cCCCeEEEECCcHHHHHHHH-HHHHCCCCEEEEEcCCHHHHHHHHHHH
Confidence            34789999999999999998 55678998888998888876544 444

>cd01080 NAD_bind_m-THF_DH_Cyclohyd NADP binding domain of methylene-tetrahydrofolate dehydrogenase/cyclohydrolase

Probab=92.31  E-value=1.7  Score=35.34  Aligned_cols=75  Identities=15%  Similarity=0.173  Sum_probs=47.5

Q ss_pred             CCCCEEEEEcCCH-HHHHHHHHHHHHCCCCeEEEEeCChhHHHHHHHcCCCEEEeCCCCcccHHHHHHHHHHHhCCCceE
Q 017868          180 GPETNVLIMGAGP-IGLVTMLGAPRAFGAPRIVIVDVDDYRLSVAKEIGADNIVKVSTNLQDIAEEVEKIQKAMGTGIDV  258 (365)
Q Consensus       180 ~~g~~vlI~G~g~-~G~~ai~~l~~~~g~~~vi~v~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~i~~~~~~~~~~~d~  258 (365)
                      -.|.+|||.|+|. +|..++. .++..|+ .+..+.++.                     +++.+.+        ..+|+
T Consensus        42 l~gk~vlViG~G~~~G~~~a~-~L~~~g~-~V~v~~r~~---------------------~~l~~~l--------~~aDi   90 (168)
T cd01080          42 LAGKKVVVVGRSNIVGKPLAA-LLLNRNA-TVTVCHSKT---------------------KNLKEHT--------KQADI   90 (168)
T ss_pred             CCCCEEEEECCcHHHHHHHHH-HHhhCCC-EEEEEECCc---------------------hhHHHHH--------hhCCE
Confidence            5789999999986 5998888 5566788 455555431                     1111111        46899


Q ss_pred             EEeCCCCHHHHHHHHHhcccCCEEEEEcc
Q 017868          259 SFDCAGLNKTMSTALGATCAGGKVCLVGM  287 (365)
Q Consensus       259 vid~~g~~~~~~~~~~~l~~~G~~~~~g~  287 (365)
                      ||.+++.+..+  ....+.++-.++.++.
T Consensus        91 VIsat~~~~ii--~~~~~~~~~viIDla~  117 (168)
T cd01080          91 VIVAVGKPGLV--KGDMVKPGAVVIDVGI  117 (168)
T ss_pred             EEEcCCCCcee--cHHHccCCeEEEEccC
Confidence            99999976422  2234555545555554

NADP binding domain of the Methylene-Tetrahydrofolate Dehydrogenase/cyclohydrolase (m-THF DH/cyclohydrolase) bifunctional enzyme. Tetrahydrofolate is a versatile carrier of activated one-carbon units. The major one-carbon folate donors are N-5 methyltetrahydrofolate, N5,N10-m-THF, and N10-formayltetrahydrofolate. The oxidation of metabolic intermediate m-THF to m-THF requires the enzyme m-THF DH. In addition, most DHs also have an associated cyclohydrolase activity which catalyzes its hydrolysis to N10-formyltetrahydrofolate. m-THF DH is typically found as part of a multifunctional protein in eukaryotes. NADP-dependent m-THF DH in mammals, birds and yeast are components of a trifunctional enzyme with DH, cyclohydrolase, and synthetase activities. Certain eukaryotic cells also contain homodimeric bifunctional DH/cyclodrolase form. In bacteria, monofucntional DH, as well a

>KOG0069 consensus Glyoxylate/hydroxypyruvate reductase (D-isomer-specific 2-hydroxy acid dehydrogenase superfamily) [Energy production and conversion]

Probab=92.29  E-value=1.9  Score=38.96  Aligned_cols=90  Identities=22%  Similarity=0.143  Sum_probs=60.7

Q ss_pred             CCCCEEEEEcCCHHHHHHHHHHHHHCCCCeEEEEeCChhHHHHHHHcCCCEEEeCCCCcccHHHHHHHHHHHhCCCceEE
Q 017868          180 GPETNVLIMGAGPIGLVTMLGAPRAFGAPRIVIVDVDDYRLSVAKEIGADNIVKVSTNLQDIAEEVEKIQKAMGTGIDVS  259 (365)
Q Consensus       180 ~~g~~vlI~G~g~~G~~ai~~l~~~~g~~~vi~v~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~i~~~~~~~~~~~d~v  259 (365)
                      ..|++|.|.|.|.+|++.++ -++.+| ..+....+...+.+...++++..        .++.+.        ....|++
T Consensus       160 ~~gK~vgilG~G~IG~~ia~-rL~~Fg-~~i~y~~r~~~~~~~~~~~~~~~--------~d~~~~--------~~~sD~i  221 (336)
T KOG0069|consen  160 LEGKTVGILGLGRIGKAIAK-RLKPFG-CVILYHSRTQLPPEEAYEYYAEF--------VDIEEL--------LANSDVI  221 (336)
T ss_pred             ccCCEEEEecCcHHHHHHHH-hhhhcc-ceeeeecccCCchhhHHHhcccc--------cCHHHH--------HhhCCEE
Confidence            36889999999999999999 667789 56777767666677666666652        232222        2456666


Q ss_pred             Ee-CCCCHHHHH----HHHHhcccCCEEEEEcc
Q 017868          260 FD-CAGLNKTMS----TALGATCAGGKVCLVGM  287 (365)
Q Consensus       260 id-~~g~~~~~~----~~~~~l~~~G~~~~~g~  287 (365)
                      +- |..++.+.+    ..+..|++++.++..+.
T Consensus       222 vv~~pLt~~T~~liNk~~~~~mk~g~vlVN~aR  254 (336)
T KOG0069|consen  222 VVNCPLTKETRHLINKKFIEKMKDGAVLVNTAR  254 (336)
T ss_pred             EEecCCCHHHHHHhhHHHHHhcCCCeEEEeccc
Confidence            55 444443322    46778888888887754

>TIGR02415 23BDH acetoin reductases

Probab=92.27  E-value=1.1  Score=38.73  Aligned_cols=79  Identities=19%  Similarity=0.282  Sum_probs=45.2

Q ss_pred             EEEEEcC-CHHHHHHHHHHHHHCCCCeEEEEeCChhHHH-HHH---HcCCCE-EEeCCC-CcccHHHHHHHHHHHhCCCc
Q 017868          184 NVLIMGA-GPIGLVTMLGAPRAFGAPRIVIVDVDDYRLS-VAK---EIGADN-IVKVST-NLQDIAEEVEKIQKAMGTGI  256 (365)
Q Consensus       184 ~vlI~G~-g~~G~~ai~~l~~~~g~~~vi~v~~~~~~~~-~~~---~~g~~~-~~~~~~-~~~~~~~~i~~~~~~~~~~~  256 (365)
                      ++||+|+ |.+|..+++.+ ...|+ .++.+.+++++.+ ..+   ..+... .+..+- +.++..+.+..+.+. .+++
T Consensus         2 ~~lItG~sg~iG~~la~~l-~~~G~-~v~~~~r~~~~~~~~~~~l~~~~~~~~~~~~Dl~~~~~i~~~~~~~~~~-~~~i   78 (254)
T TIGR02415         2 VALVTGGAQGIGKGIAERL-AKDGF-AVAVADLNEETAKETAKEINQAGGKAVAYKLDVSDKDQVFSAIDQAAEK-FGGF   78 (254)
T ss_pred             EEEEeCCCchHHHHHHHHH-HHCCC-EEEEEeCCHHHHHHHHHHHHhcCCeEEEEEcCCCCHHHHHHHHHHHHHH-cCCC
Confidence            6899987 99999999945 46698 5677766655432 222   233221 222222 222333333333332 3478


Q ss_pred             eEEEeCCCC
Q 017868          257 DVSFDCAGL  265 (365)
Q Consensus       257 d~vid~~g~  265 (365)
                      |++|.+.|.
T Consensus        79 d~vi~~ag~   87 (254)
T TIGR02415        79 DVMVNNAGV   87 (254)
T ss_pred             CEEEECCCc
Confidence            999998873

One member of this family, as characterized in Klebsiella terrigena, is described as able to interconvert acetoin + NADH with meso-2,3-butanediol + NAD(+). It is also called capable of irreversible reduction of diacetyl with NADH to acetoin. Blomqvist, et al. decline to specify either EC 1.1.1.4 which is (R,R)-butanediol dehydrogenase, or EC 1.1.1.5, which is acetoin dehydrogenase without a specified stereochemistry, for this enzyme. This enzyme is a homotetramer in the family of short chain dehydrogenases (pfam00106). Another member of this family, from Corynebacterium glutamicum, is called L-2,3-butanediol dehydrogenase (PubMed:11577733).

>PLN02657 3,8-divinyl protochlorophyllide a 8-vinyl reductase

Probab=92.25  E-value=0.85  Score=42.70  Aligned_cols=39  Identities=26%  Similarity=0.315  Sum_probs=29.1

Q ss_pred             CCCCCCEEEEEcC-CHHHHHHHHHHHHHCCCCeEEEEeCChh
Q 017868          178 NIGPETNVLIMGA-GPIGLVTMLGAPRAFGAPRIVIVDVDDY  218 (365)
Q Consensus       178 ~~~~g~~vlI~G~-g~~G~~ai~~l~~~~g~~~vi~v~~~~~  218 (365)
                      +-..+.+|||+|+ |.+|..++..| ...|. .|+++.++..
T Consensus        56 ~~~~~~kVLVtGatG~IG~~l~~~L-l~~G~-~V~~l~R~~~   95 (390)
T PLN02657         56 KEPKDVTVLVVGATGYIGKFVVREL-VRRGY-NVVAVAREKS   95 (390)
T ss_pred             cCCCCCEEEEECCCcHHHHHHHHHH-HHCCC-EEEEEEechh
Confidence            3456789999987 99999999944 45688 4666666654

>PRK06046 alanine dehydrogenase; Validated

Probab=92.22  E-value=3.3  Score=37.70  Aligned_cols=95  Identities=18%  Similarity=0.232  Sum_probs=62.2

Q ss_pred             CCCCEEEEEcCCHHHHHHHHHHHHHCCCCeEEEEeCChhHHH-HHHHc----CCCEEEeCCCCcccHHHHHHHHHHHhCC
Q 017868          180 GPETNVLIMGAGPIGLVTMLGAPRAFGAPRIVIVDVDDYRLS-VAKEI----GADNIVKVSTNLQDIAEEVEKIQKAMGT  254 (365)
Q Consensus       180 ~~g~~vlI~G~g~~G~~ai~~l~~~~g~~~vi~v~~~~~~~~-~~~~~----g~~~~~~~~~~~~~~~~~i~~~~~~~~~  254 (365)
                      ..-.++.|.|+|..|...+..++...+++.+.+.+++.++.+ +++++    +..... +    .++.    +..    .
T Consensus       127 ~~~~~vgiiG~G~qa~~h~~al~~~~~i~~v~v~~r~~~~~~~~~~~~~~~~~~~v~~-~----~~~~----~~l----~  193 (326)
T PRK06046        127 KDSKVVGIIGAGNQARTQLLALSEVFDLEEVRVYDRTKSSAEKFVERMSSVVGCDVTV-A----EDIE----EAC----D  193 (326)
T ss_pred             CCCCEEEEECCcHHHHHHHHHHHhhCCceEEEEECCCHHHHHHHHHHHHhhcCceEEE-e----CCHH----HHh----h
Confidence            345688899999999988886666778888888888887765 34444    322111 1    1222    221    2


Q ss_pred             CceEEEeCCCCHHHHHHHHHhcccCCEEEEEccCC
Q 017868          255 GIDVSFDCAGLNKTMSTALGATCAGGKVCLVGMGH  289 (365)
Q Consensus       255 ~~d~vid~~g~~~~~~~~~~~l~~~G~~~~~g~~~  289 (365)
                       .|+|+.|+.+...+ ...+.++++-++..+|...
T Consensus       194 -aDiVv~aTps~~P~-~~~~~l~~g~hV~~iGs~~  226 (326)
T PRK06046        194 -CDILVTTTPSRKPV-VKAEWIKEGTHINAIGADA  226 (326)
T ss_pred             -CCEEEEecCCCCcE-ecHHHcCCCCEEEecCCCC
Confidence             89999988754221 2335678888888888543

>PRK12769 putative oxidoreductase Fe-S binding subunit; Reviewed

Probab=92.21  E-value=0.59  Score=47.02  Aligned_cols=77  Identities=23%  Similarity=0.323  Sum_probs=48.1

Q ss_pred             CCCCEEEEEcCCHHHHHHHHHHHHHCCCCeEEEEeCChh---------------------HHHHHHHcCCCEEEeCCCCc
Q 017868          180 GPETNVLIMGAGPIGLVTMLGAPRAFGAPRIVIVDVDDY---------------------RLSVAKEIGADNIVKVSTNL  238 (365)
Q Consensus       180 ~~g~~vlI~G~g~~G~~ai~~l~~~~g~~~vi~v~~~~~---------------------~~~~~~~~g~~~~~~~~~~~  238 (365)
                      ..+.+|+|+|+|+.|+.++. .+...|++ |++++..+.                     ..+.++++|+....+.. -.
T Consensus       325 ~~~~~VaIIGaGpAGLsaA~-~L~~~G~~-V~V~E~~~~~GG~l~~gip~~~l~~~~~~~~~~~~~~~Gv~~~~~~~-v~  401 (654)
T PRK12769        325 KSDKRVAIIGAGPAGLACAD-VLARNGVA-VTVYDRHPEIGGLLTFGIPAFKLDKSLLARRREIFSAMGIEFELNCE-VG  401 (654)
T ss_pred             cCCCEEEEECCCHHHHHHHH-HHHHCCCe-EEEEecCCCCCceeeecCCCccCCHHHHHHHHHHHHHCCeEEECCCE-eC
Confidence            36889999999999999999 66677995 666665432                     34556777764322210 00


Q ss_pred             ccHHHHHHHHHHHhCCCceEEEeCCCC
Q 017868          239 QDIAEEVEKIQKAMGTGIDVSFDCAGL  265 (365)
Q Consensus       239 ~~~~~~i~~~~~~~~~~~d~vid~~g~  265 (365)
                      .+.  .+.+.    ...+|.||.++|.
T Consensus       402 ~~i--~~~~~----~~~~DavilAtGa  422 (654)
T PRK12769        402 KDI--SLESL----LEDYDAVFVGVGT  422 (654)
T ss_pred             CcC--CHHHH----HhcCCEEEEeCCC
Confidence            111  11111    2468999998885

>TIGR00507 aroE shikimate 5-dehydrogenase

Probab=92.20  E-value=0.94  Score=40.03  Aligned_cols=112  Identities=17%  Similarity=0.165  Sum_probs=62.3

Q ss_pred             CCCCCEEEEEcCCHHHHHHHHHHHHHCCCCeEEEEeCChhHHH-HHHHcCCCE-EEeCCCCcccHHHHHHHHHHHhCCCc
Q 017868          179 IGPETNVLIMGAGPIGLVTMLGAPRAFGAPRIVIVDVDDYRLS-VAKEIGADN-IVKVSTNLQDIAEEVEKIQKAMGTGI  256 (365)
Q Consensus       179 ~~~g~~vlI~G~g~~G~~ai~~l~~~~g~~~vi~v~~~~~~~~-~~~~~g~~~-~~~~~~~~~~~~~~i~~~~~~~~~~~  256 (365)
                      ...+.+++|.|+|++|.+++. .+...|+ .+.++++++++.+ +++.+.... ....     ++.+    .   ....+
T Consensus       114 ~~~~k~vliiGaGg~g~aia~-~L~~~g~-~v~v~~R~~~~~~~la~~~~~~~~~~~~-----~~~~----~---~~~~~  179 (270)
T TIGR00507       114 LRPNQRVLIIGAGGAARAVAL-PLLKADC-NVIIANRTVSKAEELAERFQRYGEIQAF-----SMDE----L---PLHRV  179 (270)
T ss_pred             CccCCEEEEEcCcHHHHHHHH-HHHHCCC-EEEEEeCCHHHHHHHHHHHhhcCceEEe-----chhh----h---cccCc
Confidence            345788999999999999998 4456687 6777778777654 444443211 1111     1111    0   12468


Q ss_pred             eEEEeCCCCHHH--H---HHHHHhcccCCEEEEEccCCCCccccchHhhhcCcE
Q 017868          257 DVSFDCAGLNKT--M---STALGATCAGGKVCLVGMGHHEMTVPLTPAAVREVD  305 (365)
Q Consensus       257 d~vid~~g~~~~--~---~~~~~~l~~~G~~~~~g~~~~~~~~~~~~~~~~~~~  305 (365)
                      |+||+|++....  .   ......+.++..++.+...... +......-.++..
T Consensus       180 DivInatp~gm~~~~~~~~~~~~~l~~~~~v~D~~y~p~~-T~ll~~A~~~G~~  232 (270)
T TIGR00507       180 DLIINATSAGMSGNIDEPPVPAEKLKEGMVVYDMVYNPGE-TPFLAEAKSLGTK  232 (270)
T ss_pred             cEEEECCCCCCCCCCCCCCCCHHHcCCCCEEEEeccCCCC-CHHHHHHHHCCCe
Confidence            999999875311  0   1123456666666666443332 2233333444443

This model finds proteins from prokaryotes and functionally equivalent domains from larger, multifunctional proteins of fungi and plants. Below the trusted cutoff of 180, but above the noise cutoff of 20, are the putative shikimate dehydrogenases of Thermotoga maritima and Mycobacterium tuberculosis, and uncharacterized paralogs of shikimate dehydrogenase from E. coli and H. influenzae. The related enzyme quinate 5-dehydrogenase scores below the noise cutoff. A neighbor-joining tree, constructed with quinate 5-dehydrogenases as the outgroup, shows the Clamydial homolog as clustering among the shikimate dehydrogenases, although the sequence is unusual in the degree of sequence divergence and the presence of an additional N-terminal domain.

>PRK08278 short chain dehydrogenase; Provisional

Probab=92.19  E-value=1.8  Score=38.20  Aligned_cols=82  Identities=26%  Similarity=0.287  Sum_probs=45.9

Q ss_pred             CCCEEEEEcC-CHHHHHHHHHHHHHCCCCeEEEEeCChhH--------HHH---HHHcCCCE-EEeCC-CCcccHHHHHH
Q 017868          181 PETNVLIMGA-GPIGLVTMLGAPRAFGAPRIVIVDVDDYR--------LSV---AKEIGADN-IVKVS-TNLQDIAEEVE  246 (365)
Q Consensus       181 ~g~~vlI~G~-g~~G~~ai~~l~~~~g~~~vi~v~~~~~~--------~~~---~~~~g~~~-~~~~~-~~~~~~~~~i~  246 (365)
                      .+.++||+|+ +++|..++..++ ..|+ .++.++++.++        .+.   ++..+... .+..+ .+.++..+.+.
T Consensus         5 ~~k~vlItGas~gIG~~ia~~l~-~~G~-~V~~~~r~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~D~~~~~~i~~~~~   82 (273)
T PRK08278          5 SGKTLFITGASRGIGLAIALRAA-RDGA-NIVIAAKTAEPHPKLPGTIHTAAEEIEAAGGQALPLVGDVRDEDQVAAAVA   82 (273)
T ss_pred             CCCEEEEECCCchHHHHHHHHHH-HCCC-EEEEEecccccccchhhHHHHHHHHHHhcCCceEEEEecCCCHHHHHHHHH
Confidence            4578999987 999999999554 5598 46666655431        112   22333322 12111 12233333334


Q ss_pred             HHHHHhCCCceEEEeCCCC
Q 017868          247 KIQKAMGTGIDVSFDCAGL  265 (365)
Q Consensus       247 ~~~~~~~~~~d~vid~~g~  265 (365)
                      +..+. -+.+|++|.++|.
T Consensus        83 ~~~~~-~g~id~li~~ag~  100 (273)
T PRK08278         83 KAVER-FGGIDICVNNASA  100 (273)
T ss_pred             HHHHH-hCCCCEEEECCCC
Confidence            33332 2479999998873

>KOG1207 consensus Diacetyl reductase/L-xylulose reductase [Secondary metabolites biosynthesis, transport and catabolism]

Probab=92.15  E-value=0.61  Score=37.59  Aligned_cols=43  Identities=26%  Similarity=0.318  Sum_probs=33.3

Q ss_pred             CCCEEEEEcC-CHHHHHHHHHHHHHCCCCeEEEEeCChhHHHHHHH
Q 017868          181 PETNVLIMGA-GPIGLVTMLGAPRAFGAPRIVIVDVDDYRLSVAKE  225 (365)
Q Consensus       181 ~g~~vlI~G~-g~~G~~ai~~l~~~~g~~~vi~v~~~~~~~~~~~~  225 (365)
                      .|..||++|+ .++|...++ .+...|+ .|+++.+.++....+-+
T Consensus         6 aG~~vlvTgagaGIG~~~v~-~La~aGA-~ViAvaR~~a~L~sLV~   49 (245)
T KOG1207|consen    6 AGVIVLVTGAGAGIGKEIVL-SLAKAGA-QVIAVARNEANLLSLVK   49 (245)
T ss_pred             cceEEEeecccccccHHHHH-HHHhcCC-EEEEEecCHHHHHHHHh
Confidence            5778899987 689999999 4456699 68888888887765433

>PRK13243 glyoxylate reductase; Reviewed

Probab=92.13  E-value=1.5  Score=40.03  Aligned_cols=88  Identities=20%  Similarity=0.201  Sum_probs=55.0

Q ss_pred             CCCEEEEEcCCHHHHHHHHHHHHHCCCCeEEEEeCChhHHHHHHHcCCCEEEeCCCCcccHHHHHHHHHHHhCCCceEEE
Q 017868          181 PETNVLIMGAGPIGLVTMLGAPRAFGAPRIVIVDVDDYRLSVAKEIGADNIVKVSTNLQDIAEEVEKIQKAMGTGIDVSF  260 (365)
Q Consensus       181 ~g~~vlI~G~g~~G~~ai~~l~~~~g~~~vi~v~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~i~~~~~~~~~~~d~vi  260 (365)
                      .|.+|.|+|.|.+|..+++ .++.+|+ .|++.+++.+.. ....++...        .++.+.+        ...|+|+
T Consensus       149 ~gktvgIiG~G~IG~~vA~-~l~~~G~-~V~~~d~~~~~~-~~~~~~~~~--------~~l~ell--------~~aDiV~  209 (333)
T PRK13243        149 YGKTIGIIGFGRIGQAVAR-RAKGFGM-RILYYSRTRKPE-AEKELGAEY--------RPLEELL--------RESDFVS  209 (333)
T ss_pred             CCCEEEEECcCHHHHHHHH-HHHHCCC-EEEEECCCCChh-hHHHcCCEe--------cCHHHHH--------hhCCEEE
Confidence            5789999999999999999 7789999 577887765432 233444321        1222221        2467777


Q ss_pred             eCCCCHHHH-----HHHHHhcccCCEEEEEcc
Q 017868          261 DCAGLNKTM-----STALGATCAGGKVCLVGM  287 (365)
Q Consensus       261 d~~g~~~~~-----~~~~~~l~~~G~~~~~g~  287 (365)
                      -+.......     ...+..++++..++.++.
T Consensus       210 l~lP~t~~T~~~i~~~~~~~mk~ga~lIN~aR  241 (333)
T PRK13243        210 LHVPLTKETYHMINEERLKLMKPTAILVNTAR  241 (333)
T ss_pred             EeCCCChHHhhccCHHHHhcCCCCeEEEECcC
Confidence            766532211     245667777776666653

>PRK00216 ubiE ubiquinone/menaquinone biosynthesis methyltransferase; Reviewed

Probab=92.10  E-value=2.6  Score=36.10  Aligned_cols=103  Identities=17%  Similarity=0.295  Sum_probs=63.0

Q ss_pred             HhcCCCCCCEEEEEcCCHHHHHHHHHHHHHCC-CCeEEEEeCChhHHHHHHHcCC----CE-EEeCCCCcccHHHHHHHH
Q 017868          175 RRANIGPETNVLIMGAGPIGLVTMLGAPRAFG-APRIVIVDVDDYRLSVAKEIGA----DN-IVKVSTNLQDIAEEVEKI  248 (365)
Q Consensus       175 ~~~~~~~g~~vlI~G~g~~G~~ai~~l~~~~g-~~~vi~v~~~~~~~~~~~~~g~----~~-~~~~~~~~~~~~~~i~~~  248 (365)
                      +.....++.+||-.|+|. |..+.. +++..+ ...+++++.++...+.+++.-.    .. +.....+..+..      
T Consensus        45 ~~~~~~~~~~vldiG~G~-G~~~~~-l~~~~~~~~~v~~~D~s~~~~~~a~~~~~~~~~~~~~~~~~~d~~~~~------  116 (239)
T PRK00216         45 KWLGVRPGDKVLDLACGT-GDLAIA-LAKAVGKTGEVVGLDFSEGMLAVGREKLRDLGLSGNVEFVQGDAEALP------  116 (239)
T ss_pred             HHhCCCCCCeEEEeCCCC-CHHHHH-HHHHcCCCCeEEEEeCCHHHHHHHHHhhcccccccCeEEEecccccCC------
Confidence            444566788999999866 777777 666654 3479999998887777655321    11 111111111110      


Q ss_pred             HHHhCCCceEEEeCCC------CHHHHHHHHHhcccCCEEEEEcc
Q 017868          249 QKAMGTGIDVSFDCAG------LNKTMSTALGATCAGGKVCLVGM  287 (365)
Q Consensus       249 ~~~~~~~~d~vid~~g------~~~~~~~~~~~l~~~G~~~~~g~  287 (365)
                        .....+|+|+....      ....+..+.+.|+++|.++....
T Consensus       117 --~~~~~~D~I~~~~~l~~~~~~~~~l~~~~~~L~~gG~li~~~~  159 (239)
T PRK00216        117 --FPDNSFDAVTIAFGLRNVPDIDKALREMYRVLKPGGRLVILEF  159 (239)
T ss_pred             --CCCCCccEEEEecccccCCCHHHHHHHHHHhccCCcEEEEEEe
Confidence              01356898875321      23466788889999999987754

>cd01075 NAD_bind_Leu_Phe_Val_DH NAD(P) binding domain of leucine dehydrogenase, phenylalanine dehydrogenase, and valine dehydrogenase

Probab=92.09  E-value=0.57  Score=39.33  Aligned_cols=48  Identities=21%  Similarity=0.324  Sum_probs=37.3

Q ss_pred             CCCCEEEEEcCCHHHHHHHHHHHHHCCCCeEEEEeCChhHHHHH-HHcCCC
Q 017868          180 GPETNVLIMGAGPIGLVTMLGAPRAFGAPRIVIVDVDDYRLSVA-KEIGAD  229 (365)
Q Consensus       180 ~~g~~vlI~G~g~~G~~ai~~l~~~~g~~~vi~v~~~~~~~~~~-~~~g~~  229 (365)
                      -.|.+++|.|.|.+|..+++ .+...|+ .|++.+.++++.+.+ +.+++.
T Consensus        26 l~gk~v~I~G~G~vG~~~A~-~L~~~G~-~Vvv~D~~~~~~~~~~~~~g~~   74 (200)
T cd01075          26 LEGKTVAVQGLGKVGYKLAE-HLLEEGA-KLIVADINEEAVARAAELFGAT   74 (200)
T ss_pred             CCCCEEEEECCCHHHHHHHH-HHHHCCC-EEEEEcCCHHHHHHHHHHcCCE
Confidence            36789999999999999999 6677899 567888888776554 445643

Amino acid dehydrogenase (DH) is a widely distributed family of enzymes that catalyzes the oxidative deamination of an amino acid to its keto acid and ammonia with concomitant reduction of NADP+. For example, leucine DH catalyzes the reversible oxidative deamination of L-leucine and several other straight or branched chain amino acids to the corresponding 2-oxoacid derivative. Amino acid DH -like NAD(P)-binding domains are members of the Rossmann fold superfamily and include glutamate, leucine, and phenylalanine DHs, methylene tetrahydrofolate DH, methylene-tetrahydromethanopterin DH, methylene-tetrahydropholate DH/cyclohydrolase, Shikimate DH-like proteins, malate oxidoreductases, and glutamyl tRNA reductase. Amino acid DHs catalyze the deamination of amino acids to keto acids with NAD(P)+ as a cofactor. The NAD(P)-binding Rossmann fold superfamily inc

>cd01484 E1-2_like Ubiquitin activating enzyme (E1), repeat 2-like

Probab=92.08  E-value=0.6  Score=40.18  Aligned_cols=32  Identities=34%  Similarity=0.561  Sum_probs=26.8

Q ss_pred             EEEEEcCCHHHHHHHHHHHHHCCCCeEEEEeCC
Q 017868          184 NVLIMGAGPIGLVTMLGAPRAFGAPRIVIVDVD  216 (365)
Q Consensus       184 ~vlI~G~g~~G~~ai~~l~~~~g~~~vi~v~~~  216 (365)
                      +|||.|+|++|..++. .+...|..++..+|.+
T Consensus         1 kVlvvG~GGlG~eilk-~La~~Gvg~i~ivD~D   32 (234)
T cd01484           1 KVLLVGAGGIGCELLK-NLALMGFGQIHVIDMD   32 (234)
T ss_pred             CEEEECCCHHHHHHHH-HHHHcCCCeEEEEeCC
Confidence            5899999999999999 5556799988888655

E1, a highly conserved small protein present universally in eukaryotic cells, is part of cascade to attach ubiquitin (Ub) covalently to substrate proteins. This cascade consists of activating (E1), conjugating (E2), and/or ligating (E3) enzymes and then targets them for degradation by the 26S proteasome. E1 activates ubiquitin by C-terminal adenylation, and subsequently forms a highly reactive thioester bond between its catalytic cysteine and ubiquitin's C-terminus. E1 also associates with E2 and promotes ubiquitin transfer to the E2's catalytic cysteine. A set of novel molecules with a structural similarity to Ub, called Ub-like proteins (Ubls), have similar conjugation cascades. In contrast to ubiquitin-E1, which is a single-chain protein with a weakly conserved two-fold repeat, many of the Ubls-E1are a heterodimer where each subunit corresponds to one half of a single-chain E1. This CD represents the family homologou

>PF03446 NAD_binding_2: NAD binding domain of 6-phosphogluconate dehydrogenase; InterPro: IPR006115 6-Phosphogluconate dehydrogenase (1

Probab=92.08  E-value=2.9  Score=33.71  Aligned_cols=87  Identities=17%  Similarity=0.226  Sum_probs=53.6

Q ss_pred             EEEEEcCCHHHHHHHHHHHHHCCCCeEEEEeCChhHHHHHHHcCCCEEEeCCCCcccHHHHHHHHHHHhCCCceEEEeCC
Q 017868          184 NVLIMGAGPIGLVTMLGAPRAFGAPRIVIVDVDDYRLSVAKEIGADNIVKVSTNLQDIAEEVEKIQKAMGTGIDVSFDCA  263 (365)
Q Consensus       184 ~vlI~G~g~~G~~ai~~l~~~~g~~~vi~v~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~i~~~~~~~~~~~d~vid~~  263 (365)
                      +|-++|.|.+|..++..| ...|+ .+.+.++++++.+.+.+.|+...       .+..+..        ...|+||-|+
T Consensus         3 ~Ig~IGlG~mG~~~a~~L-~~~g~-~v~~~d~~~~~~~~~~~~g~~~~-------~s~~e~~--------~~~dvvi~~v   65 (163)
T PF03446_consen    3 KIGFIGLGNMGSAMARNL-AKAGY-EVTVYDRSPEKAEALAEAGAEVA-------DSPAEAA--------EQADVVILCV   65 (163)
T ss_dssp             EEEEE--SHHHHHHHHHH-HHTTT-EEEEEESSHHHHHHHHHTTEEEE-------SSHHHHH--------HHBSEEEE-S
T ss_pred             EEEEEchHHHHHHHHHHH-HhcCC-eEEeeccchhhhhhhHHhhhhhh-------hhhhhHh--------hcccceEeec
Confidence            688899999999999845 45688 57888999999888877774332       1222222        2458999988


Q ss_pred             CCHHHHHHH------HHhcccCCEEEEEcc
Q 017868          264 GLNKTMSTA------LGATCAGGKVCLVGM  287 (365)
Q Consensus       264 g~~~~~~~~------~~~l~~~G~~~~~g~  287 (365)
                      .........      +..+.++..++.++.
T Consensus        66 ~~~~~v~~v~~~~~i~~~l~~g~iiid~sT   95 (163)
T PF03446_consen   66 PDDDAVEAVLFGENILAGLRPGKIIIDMST   95 (163)
T ss_dssp             SSHHHHHHHHHCTTHGGGS-TTEEEEE-SS
T ss_pred             ccchhhhhhhhhhHHhhccccceEEEecCC
Confidence            875544443      333445555555543

1.1.44 from EC) (6PGD) is an oxidative carboxylase that catalyses the decarboxylating reduction of 6-phosphogluconate into ribulose 5-phosphate in the presence of NADP. This reaction is a component of the hexose mono-phosphate shunt and pentose phosphate pathways (PPP) [, ]. Prokaryotic and eukaryotic 6PGD are proteins of about 470 amino acids whose sequence are highly conserved []. The protein is a homodimer in which the monomers act independently []: each contains a large, mainly alpha-helical domain and a smaller beta-alpha-beta domain, containing a mixed parallel and anti-parallel 6-stranded beta sheet []. NADP is bound in a cleft in the small domain, the substrate binding in an adjacent pocket []. This family represents the NADP binding domain of 6-phosphogluconate dehydrogenase which adopts a Rossman fold. The C-terminal domain is described in IPR006114 from INTERPRO.; GO: 0004616 phosphogluconate dehydrogenase (decarboxylating) activity, 0006098 pentose-phosphate shunt, 0055114 oxidation-reduction process; PDB: 3AX6_D 3PDU_G 3Q3C_A 3OBB_A 4DLL_B 1PGP_A 1PGN_A 2PGD_A 1PGQ_A 1PGO_A ....

---

Homologous Structure Templates

Structure Templates Detected by BLAST

Original result of BLAST against Protein Data Bank

ID	Length	Definition	E-value
Query	365
3qe3_A	355	Sheep Liver Sorbitol Dehydrogenase Length = 355		2e-88
1e3j_A	352	Ketose Reductase (Sorbitol Dehydrogenase) From Silv		4e-88
1pl7_A	356	Human Sorbitol Dehydrogenase (Apo) Length = 356		6e-88
1pl6_A	356	Human SdhNADHINHIBITOR COMPLEX Length = 356		2e-85
3m6i_A	363	L-Arabinitol 4-Dehydrogenase Length = 363		7e-60
2dfv_A	347	Hyperthermophilic Threonine Dehydrogenase From Pyro		3e-40
2d8a_A	348	Crystal Structure Of Ph0655 From Pyrococcus Horikos		3e-40
3gfb_A	350	L-Threonine Dehydrogenase (Tktdh) From The Hyperthe		4e-39
4ej6_A	370	Crystal Structure Of A Putative Zinc-Binding Dehydr		4e-37
2dq4_A	343	Crystal Structure Of Threonine 3-Dehydrogenase Leng		6e-37
4a2c_A	346	Crystal Structure Of Galactitol-1-Phosphate Dehydro		4e-31
4ilk_A	359	Crystal Structure Of Short Chain Alcohol Dehydrogen		1e-29
1rjw_A	339	Crystal Structure Of Nad(+)-Dependent Alcohol Dehyd		2e-27
3pii_A	339	Crystal Structure Of Mutant Of Ht- Alcohol Dehydrog		3e-27
2eih_A	343	Crystal Structure Of Nad-Dependent Alcohol Dehydrog		4e-25
2eer_A	347	Structural Study Of Project Id St2577 From Sulfolob		8e-25
4eez_A	348	Crystal Structure Of Lactococcus Lactis Alcohol Deh		6e-24
4eex_A	348	Crystal Structure Of Lactococcus Lactis Alcohol Deh		1e-23
1e3l_A	376	P47h Mutant Of Mouse Class Ii Alcohol Dehydrogenase		4e-23
1e3e_A	376	Mouse Class Ii Alcohol Dehydrogenase Complex With N		4e-23
1ee2_B	373	The Structure Of Steroid-Active Alcohol Dehydrogena		1e-22
1ee2_A	373	The Structure Of Steroid-Active Alcohol Dehydrogena		1e-22
1mgo_A	374	Horse Liver Alcohol Dehydrogenase Phe93ala Mutant L		1e-22
1hdz_A	374	Three-Dimensional Structures Of Three Human Alcohol		2e-22
6adh_A	374	Structure Of Triclinic Ternary Complex Of Horse Liv		3e-22
1axe_A	374	Crystal Structure Of The Active-Site Mutant Phe93->		3e-22
3oq6_A	374	Horse Liver Alcohol Dehydrogenase A317c Mutant Comp		4e-22
2xaa_A	345	Alcohol Dehydrogenase Adh-'a' From Rhodococcus Rube		6e-22
1qv6_A	374	Horse Liver Alcohol Dehydrogenase His51glnLYS228ARG		7e-22
1n8k_A	374	Horse Liver Alcohol Dehydrogenase Val292thr Mutant		8e-22
3fpl_A	351	Chimera Of Alcohol Dehydrogenase By Exchange Of The		8e-22
1axg_A	374	Crystal Structure Of The Val203->ala Mutant Of Live		8e-22
2nvb_A	352	Contribution Of Pro275 To The Thermostability Of Th		9e-22
1qlh_A	374	Horse Liver Alcohol Dehydrogenase Complexed To Nad		9e-22
1a71_A	374	Ternary Complex Of An Active Site Double Mutant Of		9e-22
1ykf_A	352	Nadp-Dependent Alcohol Dehydrogenase From Thermoana		9e-22
1htb_A	374	Crystallization Of Human Beta3 Alcohol Dehydrogenas		1e-21
1ju9_A	374	Horse Liver Alcohol Dehydrogenase Val292ser Mutant		1e-21
1hdy_A	374	Three-Dimensional Structures Of Three Human Alcohol		1e-21
1hdx_A	374	Three-Dimensional Structures Of Three Human Alcohol		2e-21
1hso_A	374	Human Alpha Alcohol Dehydrogenase (Adh1a) Length =		2e-21
1ht0_A	374	Human Gamma-2 Alcohol Dehydrogense Length = 374		2e-21
3meq_A	365	Crystal Structure Of Alcohol Dehydrogenase From Bru		5e-21
3fpc_A	352	Chimera Of Alcohol Dehydrogenase By Exchange Of The		6e-21
1r37_A	347	Alcohol Dehydrogenase From Sulfolobus Solfataricus		1e-20
1llu_A	342	The Ternary Complex Of Pseudomonas Aeruginosa Alcoh		1e-20
1nto_A	347	N249y Mutant Of Alcohol Dehydrogenase From The Arch		2e-20
3i4c_A	347	Crystal Structure Of Sulfolobus Solfataricus Adh(Ss		4e-20
3cos_A	381	Crystal Structure Of Human Class Ii Alcohol Dehydro		4e-20
1ped_A	351	Bacterial Secondary Alcohol Dehydrogenase (Apo-Form		7e-20
3fsr_A	352	Chimera Of Alcohol Dehydrogenase By Exchange Of The		9e-20
2b83_A	351	A Single Amino Acid Substitution In The Clostridium		9e-20
1y9a_A	360	Alcohol Dehydrogenase From Entamoeba Histolotica In		1e-19
3ftn_A	352	Q165eS254K DOUBLE MUTANT CHIMERA OF ALCOHOL DEHYDRO		1e-19
2oui_A	360	D275p Mutant Of Alcohol Dehydrogenase From Protozoa		2e-19
1jqb_A	351	Alcohol Dehydrogenase From Clostridium Beijerinckii		3e-19
1jvb_A	347	Alcohol Dehydrogenase From The Archaeon Sulfolobus		3e-19
1h2b_A	359	Crystal Structure Of The Alcohol Dehydrogenase From		4e-19
3s1l_A	340	Crystal Structure Of Apo-Form Furx Length = 340		1e-18
1vj0_A	380	Crystal Structure Of Alcohol Dehydrogenase (Tm0436)		3e-18
3ip1_A	404	Structure Of Putative Alcohol Dehydrogenase (Tm_042		7e-17
1f8f_A	371	Crystal Structure Of Benzyl Alcohol Dehydrogenase F		9e-17
3uko_A	378	Crystal Structure Of S-Nitrosoglutathione Reductase		1e-16
1mc5_A	374	Ternary Complex Of Human Glutathione-Dependent Form		1e-16
1teh_A	373	Structure Of Human Liver Chichi Alcohol Dehydrogena		1e-16
3qj5_A	374	S-Nitrosoglutathione Reductase (Gsnor) In Complex W		2e-16
1p0c_A	373	Crystal Structure Of The Nadp(H)-Dependent Vertebra		2e-16
1cdo_A	374	Alcohol Dehydrogenase (E.C.1.1.1.1) (Ee Isozyme) Co		4e-16
1agn_A	373	X-Ray Structure Of Human Sigma Alcohol Dehydrogenas		9e-16
1d1t_A	373	Mutant Of Human Sigma Alcohol Dehydrogenase With Le		9e-16
4dl9_A	396	Crystal Structure Of S-nitrosoglutathione Reductase		1e-15
2fzw_A	373	Structure Of The Binary Complex Of The E67l Mutant		1e-15
1yqd_A	366	Sinapyl Alcohol Dehydrogenase Complexed With Nadp+		2e-13
2dph_A	398	Crystal Structure Of Formaldehyde Dismutase Length		8e-13
2h6e_A	344	Crystal Structure Of The D-Arabinose Dehydrogenase		2e-11
1kol_A	398	Crystal Structure Of Formaldehyde Dehydrogenase Len		1e-10
1wly_A	333	Crystal Structure Of 2-haloacrylate Reductase Lengt		4e-09
3uog_A	363	Crystal Structure Of Putative Alcohol Dehydrogenase		4e-09
3two_A	348	The Crystal Structure Of Cad From Helicobacter Pylo		5e-09
3jyl_A	325	Crystal Structures Of Pseudomonas Syringae Pv. Toma		3e-08
2hcy_A	347	Yeast Alcohol Dehydrogenase I, Saccharomyces Cerevi		1e-07
3goh_A	315	Crystal Structure Of Alcohol Dehydrogenase Superfam		2e-07
3qwa_A	334	Crystal Structure Of Saccharomyces Cerevisiae Zeta-		2e-07
1uuf_A	369	Crystal Structure Of A Zinc-Type Alcohol Dehydrogen		6e-07
1ps0_A	360	Crystal Structure Of The Nadp(H)-Dependent Cinnamyl		1e-06
4a27_A	349	Crystal Structure Of Human Synaptic Vesicle Membran		4e-06
3fbg_A	346	Crystal Structure Of A Putative Arginate Lyase From		8e-06
3krt_A	456	Crystal Structure Of Putative Crotonyl Coa Reductas		3e-04
1yb5_A	351	Crystal Structure Of Human Zeta-crystallin With Bou		4e-04
2b5w_A	357	Crystal Structure Of D38c Glucose Dehydrogenase Mut		4e-04

>pdb|3QE3|A Chain A, Sheep Liver Sorbitol Dehydrogenase Length = 355

Iteration: 1
 Score =  322 bits (826), Expect = 2e-88,   Method: Compositional matrix adjust.
 Identities = 169/347 (48%), Positives = 238/347 (68%), Gaps = 8/347 (2%)
Query: 18  NMAAWLLGVNTLKIQPFELPSLGPYDVLVRMKAVGICGSDVHYLKTLRCADFVVKEPMVI 77
           N++  + G   L+++ + +P  GP +VL++M +VGICGSDVHY +  R  DFVVK+PMV+
Sbjct: 7   NLSLVVHGPGDLRLENYPIPEPGPNEVLLKMHSVGICGSDVHYWQHGRIGDFVVKKPMVL 66
Query: 78  GHECAGVIEKVGSEVKTLVPGDRVALEPGISCWRCDHCKGGRYNLCPEMKFFATPPVHGS 137
           GHE +G + KVGS V+ L PGDRVA++PG      + CK GRYNL P + F ATPP  G+
Sbjct: 67  GHEASGTVVKVGSLVRHLQPGDRVAIQPGAPRQTDEFCKIGRYNLSPTIFFCATPPDDGN 126
Query: 138 LANQVVHPADLCFKLPDNVSLEEGAMCEPLSVGLHACRRANIGPETNVLIMGAGPIGLVT 197
           L     H A+ C+KLPDNV+ EEGA+ EPLSVG+HACRRA +     VL+ GAGPIGLV 
Sbjct: 127 LCRFYKHNANFCYKLPDNVTFEEGALIEPLSVGIHACRRAGVTLGNKVLVCGAGPIGLVN 186
Query: 198 MLGAPRAFGAPRIVIVDVDDYRLSVAKEIGADNIVKVST-NLQDIAEEVEKIQKAMGTGI 256
           +L A +A GA ++V+ D+   RLS AKE+GAD I+++S  + ++IA++VE +   +G+  
Sbjct: 187 LLAA-KAMGAAQVVVTDLSASRLSKAKEVGADFILEISNESPEEIAKKVEGL---LGSKP 242
Query: 257 DVSFDCAGLNKTMSTALGATCAGGKVCLVGMGHHEMTVPLTPAAVREVDVVGVFRYKNTW 316
           +V+ +C G+  ++   + AT +GG + LVG+G    +VPL  AA REVD+ GVFRY NTW
Sbjct: 243 EVTIECTGVETSIQAGIYATHSGGTLVLVGLGSEMTSVPLVHAATREVDIKGVFRYCNTW 302
Query: 317 PLCLELLRSGKIDVKPLVTHRFGFSQKEVEEAFETSARGGTAIKVMF 363
           P+ + +L S  ++VKPLVTHRF    ++  EAFETS + G  +KVM 
Sbjct: 303 PMAISMLASKSVNVKPLVTHRFPL--EKALEAFETSKK-GLGLKVMI 346

>pdb|1E3J|A Chain A, Ketose Reductase (Sorbitol Dehydrogenase) From Silverleaf Whitefly Length = 352

Iteration: 1
 Score =  321 bits (822), Expect = 4e-88,   Method: Compositional matrix adjust.
 Identities = 171/348 (49%), Positives = 229/348 (65%), Gaps = 5/348 (1%)
Query: 18  NMAAWLLGVNTLKIQPFELPSLGPYDVLVRMKAVGICGSDVHYLKTLRCADFVVKEPMVI 77
           N++A L   N L+++   +P     +VL++M  VGICGSDVHY +  R ADF+VK+PMVI
Sbjct: 5   NLSAVLYKQNDLRLEQRPIPEPKEDEVLLQMAYVGICGSDVHYYEHGRIADFIVKDPMVI 64
Query: 78  GHECAGVIEKVGSEVKTLVPGDRVALEPGISCWRCDHCKGGRYNLCPEMKFFATPPVHGS 137
           GHE +G + KVG  VK L  GDRVA+EPG+ C RC  CK G+YNLCP++ F ATPP  G+
Sbjct: 65  GHEASGTVVKVGKNVKHLKKGDRVAVEPGVPCRRCQFCKEGKYNLCPDLTFCATPPDDGN 124
Query: 138 LANQVVHPADLCFKLPDNVSLEEGAMCEPLSVGLHACRRANIGPETNVLIMGAGPIGLVT 197
           LA   VH AD C KLPDNVSLEEGA+ EPLSVG+HACRRA +   T VL++GAGPIGLV+
Sbjct: 125 LARYYVHAADFCHKLPDNVSLEEGALLEPLSVGVHACRRAGVQLGTTVLVIGAGPIGLVS 184
Query: 198 MLGAPRAFGAPRIVIVDVDDYRLSVAKEIGADNIVKVSTNLQDIAEEVEKIQKAMGTGID 257
           +L A +A+GA  +V       RL VAK  GAD  + V    ++ +  +E+I+ A+G   +
Sbjct: 185 VLAA-KAYGA-FVVCTARSPRRLEVAKNCGADVTLVVDPAKEEESSIIERIRSAIGDLPN 242
Query: 258 VSFDCAGLNKTMSTALGATCAGGKVCLVGMGHHEMTVPLTPAAVREVDVVGVFRYKNTWP 317
           V+ DC+G  K ++  +  T  GG + LVGMG   +TVPL  A  RE+D+  VFRY N +P
Sbjct: 243 VTIDCSGNEKCITIGINITRTGGTLMLVGMGSQMVTVPLVNACAREIDIKSVFRYCNDYP 302
Query: 318 LCLELLRSGKIDVKPLVTHRFGFSQKEVEEAFETS-ARGGTAIKVMFN 364
           + LE++ SG+ +VK LVTH F   Q    +AFE +  +    IKVM +
Sbjct: 303 IALEMVASGRCNVKQLVTHSFKLEQ--TVDAFEAARKKADNTIKVMIS 348

>pdb|1PL7|A Chain A, Human Sorbitol Dehydrogenase (Apo) Length = 356

Iteration: 1
 Score =  320 bits (821), Expect = 6e-88,   Method: Compositional matrix adjust.
 Identities = 170/348 (48%), Positives = 234/348 (67%), Gaps = 8/348 (2%)
Query: 18  NMAAWLLGVNTLKIQPFELPSLGPYDVLVRMKAVGICGSDVHYLKTLRCADFVVKEPMVI 77
           N++  + G   L+++ + +P  GP +VL+RM +VGICGSDVHY +  R  +F+VK+PMV+
Sbjct: 8   NLSLVVHGPGDLRLENYPIPEPGPNEVLLRMHSVGICGSDVHYWEYGRIGNFIVKKPMVL 67
Query: 78  GHECAGVIEKVGSEVKTLVPGDRVALEPGISCWRCDHCKGGRYNLCPEMKFFATPPVHGS 137
           GHE +G +EKVGS VK L PGDRVA+EPG      + CK GRYNL P + F ATPP  G+
Sbjct: 68  GHEASGTVEKVGSSVKHLKPGDRVAIEPGAPRENDEFCKMGRYNLSPSIFFCATPPDDGN 127
Query: 138 LANQVVHPADLCFKLPDNVSLEEGAMCEPLSVGLHACRRANIGPETNVLIMGAGPIGLVT 197
           L     H A  C+KLPDNV+ EEGA+ EPLSVG+HACRR  +     VL+ GAGPIG+VT
Sbjct: 128 LCRFYKHNAAFCYKLPDNVTFEEGALIEPLSVGIHACRRGGVTLGHKVLVCGAGPIGMVT 187
Query: 198 MLGAPRAFGAPRIVIVDVDDYRLSVAKEIGADNIVKVST-NLQDIAEEVEKIQKAMGTGI 256
           +L A +A GA ++V+ D+   RLS AKEIGAD ++++S  + Q+IA +VE     +G   
Sbjct: 188 LLVA-KAMGAAQVVVTDLSATRLSKAKEIGADLVLQISKESPQEIARKVE---GQLGCKP 243
Query: 257 DVSFDCAGLNKTMSTALGATCAGGKVCLVGMGHHEMTVPLTPAAVREVDVVGVFRYKNTW 316
           +V+ +C G   ++   + AT +GG + LVG+G    TVPL  AA+REVD+ GVFRY NTW
Sbjct: 244 EVTIECTGAEASIQAGIYATRSGGTLVLVGLGSEMTTVPLLHAAIREVDIKGVFRYCNTW 303
Query: 317 PLCLELLRSGKIDVKPLVTHRFGFSQKEVEEAFETSARGGTAIKVMFN 364
           P+ + +L S  ++VKPLVTHRF    ++  EAFET  + G  +K+M  
Sbjct: 304 PVAISMLASKSVNVKPLVTHRFPL--EKALEAFETFKK-GLGLKIMLK 348

>pdb|1PL6|A Chain A, Human SdhNADHINHIBITOR COMPLEX Length = 356

Iteration: 1
 Score =  312 bits (800), Expect = 2e-85,   Method: Compositional matrix adjust.
 Identities = 166/339 (48%), Positives = 226/339 (66%), Gaps = 7/339 (2%)
Query: 18  NMAAWLLGVNTLKIQPFELPSLGPYDVLVRMKAVGICGSDVHYLKTLRCADFVVKEPMVI 77
           N++  + G   L+++ + +P  GP +VL+R  +VGICGSDVHY +  R  +F+VK+P V+
Sbjct: 8   NLSLVVHGPGDLRLENYPIPEPGPNEVLLRXHSVGICGSDVHYWEYGRIGNFIVKKPXVL 67
Query: 78  GHECAGVIEKVGSEVKTLVPGDRVALEPGISCWRCDHCKGGRYNLCPEMKFFATPPVHGS 137
           GHE +G +EKVGS VK L PGDRVA+EPG      + CK GRYNL P + F ATPP  G+
Sbjct: 68  GHEASGTVEKVGSSVKHLKPGDRVAIEPGAPRENDEFCKXGRYNLSPSIFFCATPPDDGN 127
Query: 138 LANQVVHPADLCFKLPDNVSLEEGAMCEPLSVGLHACRRANIGPETNVLIMGAGPIGLVT 197
           L     H A  C+KLPDNV+ EEGA+ EPLSVG+HACRR  +     VL+ GAGPIG VT
Sbjct: 128 LCRFYKHNAAFCYKLPDNVTFEEGALIEPLSVGIHACRRGGVTLGHKVLVCGAGPIGXVT 187
Query: 198 MLGAPRAFGAPRIVIVDVDDYRLSVAKEIGADNIVKVST-NLQDIAEEVEKIQKAMGTGI 256
           +L A +A GA ++V+ D+   RLS AKEIGAD ++++S  + Q+IA +VE     +G   
Sbjct: 188 LLVA-KAXGAAQVVVTDLSATRLSKAKEIGADLVLQISKESPQEIARKVE---GQLGCKP 243
Query: 257 DVSFDCAGLNKTMSTALGATCAGGKVCLVGMGHHEMTVPLTPAAVREVDVVGVFRYKNTW 316
           +V+ +C G   ++   + AT +GG + LVG+G    TVPL  AA+REVD+ GVFRY NTW
Sbjct: 244 EVTIECTGAEASIQAGIYATRSGGTLVLVGLGSEXTTVPLLHAAIREVDIKGVFRYCNTW 303
Query: 317 PLCLELLRSGKIDVKPLVTHRFGFSQKEVEEAFETSARG 355
           P+ +  L S  ++VKPLVTHRF    ++  EAFET  +G
Sbjct: 304 PVAISXLASKSVNVKPLVTHRFPL--EKALEAFETFKKG 340

>pdb|3M6I|A Chain A, L-Arabinitol 4-Dehydrogenase Length = 363

Iteration: 1
 Score =  227 bits (579), Expect = 7e-60,   Method: Compositional matrix adjust.
 Identities = 140/325 (43%), Positives = 197/325 (60%), Gaps = 9/325 (2%)
Query: 43  DVLVRMKAVGICGSDVHYLKTLRCADFVVKEPMVIGHECAGVIEKVGSEVKTLVPGDRVA 102
           +V V +++ GICGSDVH+ K       +V+   V+GHE AG +  V   VK++  GDRVA
Sbjct: 42  EVTVAVRSTGICGSDVHFWKHGCIGPMIVECDHVLGHESAGEVIAVHPSVKSIKVGDRVA 101
Query: 103 LEPGISCWRCDHCKGGRYNLCPEMKFFATPPVHGSLANQVVHPADLCFKLPDNVSLEEGA 162
           +EP + C  C+ C  GRYN C  + F +TPPV G L   V HPA  C K+  N+S E GA
Sbjct: 102 IEPQVICNACEPCLTGRYNGCERVDFLSTPPVPGLLRRYVNHPAVWCHKI-GNMSYENGA 160
Query: 163 MCEPLSVGLHACRRANIGPETNVLIMGAGPIGLVTMLGAPRAFGAPRIVIVDVDDYRLSV 222
           M EPLSV L   +RA +     VLI GAGPIGL+TML A +A GA  +VI D+D+ RL  
Sbjct: 161 MLEPLSVALAGLQRAGVRLGDPVLICGAGPIGLITMLCA-KAAGACPLVITDIDEGRLKF 219
Query: 223 AKEIGADNIVKVSTNLQDIAEEVEKIQKAMGTGID--VSFDCAGLNKTMSTALGATCAGG 280
           AKEI  + +      L    E  +KI ++ G GI+  V+ +C G+  +++ A+ A   GG
Sbjct: 220 AKEICPEVVTHKVERL-SAEESAKKIVESFG-GIEPAVALECTGVESSIAAAIWAVKFGG 277
Query: 281 KVCLVGMGHHEMTVPLTPAAVREVDVVGVFRYKNTWPLCLELLRSGKIDVKPLVTHRFGF 340
           KV ++G+G +E+ +P   A+VREVD+   +RY NTWP  + L+ +G +D+  LVTHRF  
Sbjct: 278 KVFVIGVGKNEIQIPFMRASVREVDLQFQYRYCNTWPRAIRLVENGLVDLTRLVTHRFPL 337
Query: 341 SQKEVEEAFETSARGGT-AIKVMFN 364
             ++  +AFET++   T AIKV   
Sbjct: 338 --EDALKAFETASDPKTGAIKVQIQ 360

>pdb|2DFV|A Chain A, Hyperthermophilic Threonine Dehydrogenase From Pyrococcus Horikoshii Length = 347

Iteration: 1
 Score =  162 bits (410), Expect = 3e-40,   Method: Compositional matrix adjust.
 Identities = 107/335 (31%), Positives = 180/335 (53%), Gaps = 14/335 (4%)
Query: 35  ELPSLGPYDVLVRMKAVGICGSDVHYLKTLRCADFVVKEPMVIGHECAGVIEKVGSEVKT 94
           ++P  GP +VL+++ A  ICG+D+H  +    A   +K P + GHE AG + ++G  V+ 
Sbjct: 22  DVPKPGPGEVLIKVLATSICGTDLHIYEWNEWAQSRIKPPQIXGHEVAGEVVEIGPGVEG 81
Query: 95  LVPGDRVALEPGISCWRCDHCKGGRYNLCPEMKFFATPPVHGSLANQVVHPADLCFKLPD 154
           +  GD V++E  I C +C  C+ G+Y++C   K F      G  A   V PA   +K P 
Sbjct: 82  IEVGDYVSVETHIVCGKCYACRRGQYHVCQNTKIFGV-DTDGVFAEYAVVPAQNIWKNPK 140
Query: 155 NVSLEEGAMCEPLSVGLHACRRANIGPETNVLIMGAGPIGLVTMLGAPRAFGAPRIVIVD 214
           ++  E   + EPL   +       I  ++ VLI GAGP+GL+ +  A +A GA  +++ +
Sbjct: 141 SIPPEYATLQEPLGNAVDTVLAGPISGKS-VLITGAGPLGLLGIAVA-KASGAYPVIVSE 198
Query: 215 VDDYRLSVAKEIGADNIVKVSTNLQDIAEEVEKIQKAMGTGIDVSFDCAGLNKTMSTALG 274
             D+R  +AK++GAD +  ++   +D+ +EV  I    G G+DV  + +G  K +   L 
Sbjct: 199 PSDFRRELAKKVGADYV--INPFEEDVVKEVXDITD--GNGVDVFLEFSGAPKALEQGLQ 254
Query: 275 ATCAGGKVCLVGMGHHEMTVPLTPAAV-REVDVVGVF--RYKNTWPLCLELLRSGKIDVK 331
           A    G+V L+G+   ++T+      + + + + G+       TW     LL+SGK+++ 
Sbjct: 255 AVTPAGRVSLLGLYPGKVTIDFNNLIIFKALTIYGITGRHLWETWYTVSRLLQSGKLNLD 314
Query: 332 PLVTHRF-GFSQKEVEEAFETSARGGTAIKVMFNL 365
           P++TH++ GF +   EEAFE   R G   KV+F L
Sbjct: 315 PIITHKYKGFDK--YEEAFEL-XRAGKTGKVVFXL 346

>pdb|2D8A|A Chain A, Crystal Structure Of Ph0655 From Pyrococcus Horikoshii Ot3 Length = 348

Iteration: 1
 Score =  162 bits (410), Expect = 3e-40,   Method: Compositional matrix adjust.
 Identities = 107/335 (31%), Positives = 180/335 (53%), Gaps = 14/335 (4%)
Query: 35  ELPSLGPYDVLVRMKAVGICGSDVHYLKTLRCADFVVKEPMVIGHECAGVIEKVGSEVKT 94
           ++P  GP +VL+++ A  ICG+D+H  +    A   +K P + GHE AG + ++G  V+ 
Sbjct: 23  DVPKPGPGEVLIKVLATSICGTDLHIYEWNEWAQSRIKPPQIXGHEVAGEVVEIGPGVEG 82
Query: 95  LVPGDRVALEPGISCWRCDHCKGGRYNLCPEMKFFATPPVHGSLANQVVHPADLCFKLPD 154
           +  GD V++E  I C +C  C+ G+Y++C   K F      G  A   V PA   +K P 
Sbjct: 83  IEVGDYVSVETHIVCGKCYACRRGQYHVCQNTKIFGV-DTDGVFAEYAVVPAQNIWKNPK 141
Query: 155 NVSLEEGAMCEPLSVGLHACRRANIGPETNVLIMGAGPIGLVTMLGAPRAFGAPRIVIVD 214
           ++  E   + EPL   +       I  ++ VLI GAGP+GL+ +  A +A GA  +++ +
Sbjct: 142 SIPPEYATLQEPLGNAVDTVLAGPISGKS-VLITGAGPLGLLGIAVA-KASGAYPVIVSE 199
Query: 215 VDDYRLSVAKEIGADNIVKVSTNLQDIAEEVEKIQKAMGTGIDVSFDCAGLNKTMSTALG 274
             D+R  +AK++GAD +  ++   +D+ +EV  I    G G+DV  + +G  K +   L 
Sbjct: 200 PSDFRRELAKKVGADYV--INPFEEDVVKEVXDITD--GNGVDVFLEFSGAPKALEQGLQ 255
Query: 275 ATCAGGKVCLVGMGHHEMTVPLTPAAV-REVDVVGVF--RYKNTWPLCLELLRSGKIDVK 331
           A    G+V L+G+   ++T+      + + + + G+       TW     LL+SGK+++ 
Sbjct: 256 AVTPAGRVSLLGLYPGKVTIDFNNLIIFKALTIYGITGRHLWETWYTVSRLLQSGKLNLD 315
Query: 332 PLVTHRF-GFSQKEVEEAFETSARGGTAIKVMFNL 365
           P++TH++ GF +   EEAFE   R G   KV+F L
Sbjct: 316 PIITHKYKGFDK--YEEAFEL-XRAGKTGKVVFXL 347

>pdb|3GFB|A Chain A, L-Threonine Dehydrogenase (Tktdh) From The Hyperthermophilic Archaeon Thermococcus Kodakaraensis Length = 350

Iteration: 1
 Score =  158 bits (400), Expect = 4e-39,   Method: Compositional matrix adjust.
 Identities = 106/333 (31%), Positives = 178/333 (53%), Gaps = 13/333 (3%)
Query: 35  ELPSLGPYDVLVRMKAVGICGSDVHYLKTLRCADFVVKEPMVIGHECAGVIEKVGSEVKT 94
           ++P  GP +VL+++ A  ICG+D+H  +    A   +K P ++GHE AG + +VG  V+ 
Sbjct: 23  DVPKPGPGEVLIKVLATSICGTDLHIYEWNEWAQSRIKPPQIMGHEVAGEVVEVGPGVED 82
Query: 95  LVPGDRVALEPGISCWRCDHCKGGRYNLCPEMKFFATPPVHGSLANQVVHPADLCFKLPD 154
           L  GD +++E  I C +C  CK  RY++C   K F    + G  A+  + PA   +K P 
Sbjct: 83  LQVGDYISVETHIVCGKCYACKHNRYHVCQNTKIFGV-DMDGVFAHYAIVPAKNAWKNPK 141
Query: 155 NVSLEEGAMCEPLSVGLHACRRANIGPETNVLIMGAGPIGLVTMLGAPRAFGAPRIVIVD 214
           ++  E  A+ EPL   +       I   +  LI GAGP+GL+ +  A +A GA  +++ +
Sbjct: 142 DMPPEYAALQEPLGNAVDTVLAGPIAGRST-LITGAGPLGLLGIAVA-KASGAYPVIVSE 199
Query: 215 VDDYRLSVAKEIGADNIVKVSTNLQDIAEEVEKIQKAMGTGIDVSFDCAGLNKTMSTALG 274
             ++R  +AK++GAD +  V+   +D  + V  I    G G++V  + +G  K +   L 
Sbjct: 200 PSEFRRKLAKKVGADYV--VNPFEEDPVKFVMDITD--GAGVEVFLEFSGAPKALEQGLK 255
Query: 275 ATCAGGKVCLVGMGHHEMTVPLTPAAV-REVDVVGVF--RYKNTWPLCLELLRSGKIDVK 331
           A   GG+V L+G+   E+T+      + + ++V G+       TW     L++SGK+++ 
Sbjct: 256 AVTPGGRVSLLGLFPREVTIDFNNLIIFKALEVHGITGRHLWETWYTVSSLIQSGKLNLD 315
Query: 332 PLVTHRF-GFSQKEVEEAFETSARGGTAIKVMF 363
           P++TH++ GF +   EEAFE    G T   V F
Sbjct: 316 PIITHKYKGFDK--FEEAFELMRAGKTGKVVFF 346

>pdb|4EJ6|A Chain A, Crystal Structure Of A Putative Zinc-Binding Dehydrogenase (Target Psi-012003) From Sinorhizobium Meliloti 1021 Length = 370

Iteration: 1
 Score =  152 bits (383), Expect = 4e-37,   Method: Compositional matrix adjust.
 Identities = 100/327 (30%), Positives = 164/327 (50%), Gaps = 14/327 (4%)
Query: 20  AAWLLGVNTLKIQPFELPSLGPYDVLVRMKAVGICGSDVHYLKTLRCADFVVKEPMVIGH 79
           A  L  V  + ++   +P  GP D+LV+++A GICG+D H L      +F    P+ +GH
Sbjct: 26  AVRLESVGNISVRNVGIPEPGPDDLLVKVEACGICGTDRHLLH----GEFPSTPPVTLGH 81
Query: 80  ECAGVIEKVGSEVKTLVPGDRVALEPGISCWRCDHCKGGRYNLCPEMKFFATPPVH--GS 137
           E  G++ + GS V+ + PG R+  +P ISC RC  C+ GR NLC  ++      +H  G 
Sbjct: 82  EFCGIVVEAGSAVRDIAPGARITGDPNISCGRCPQCQAGRVNLCRNLRAIG---IHRDGG 138
Query: 138 LANQVVHPADLCFKLPDNVSLEEGAMCEPLSVGLHACRRANIGPETNVLIMGAGPIGLVT 197
            A  V+ P    F++P  +    GA CEPL+  LH    + I   + V I+G G IGL+T
Sbjct: 139 FAEYVLVPRKQAFEIPLTLDPVHGAFCEPLACCLHGVDLSGIKAGSTVAILGGGVIGLLT 198
Query: 198 MLGAPRAFGAPRIVIVDVDDYRLSVAKEIGADNIVKVSTNLQDIAEEVEKIQKAMGTGID 257
           +  A R  GA  +++      +  +A+E+GA   V  S    D+ E +      +  G+D
Sbjct: 199 VQLA-RLAGATTVILSTRQATKRRLAEEVGATATVDPSAG--DVVEAIAGPVGLVPGGVD 255
Query: 258 VSFDCAGLNKTMSTALGATCAGGKVCLVGMGHHEMTVPLTPAAV--REVDVVGVFRYKNT 315
           V  +CAG+ +T+  +     AGG V ++G+      V + P  +  RE+ V+G F     
Sbjct: 256 VVIECAGVAETVKQSTRLAKAGGTVVILGVLPQGEKVEIEPFDILFRELRVLGSFINPFV 315
Query: 316 WPLCLELLRSGKIDVKPLVTHRFGFSQ 342
                +L+ +G I++   ++ R    +
Sbjct: 316 HRRAADLVATGAIEIDRXISRRISLDE 342

>pdb|2DQ4|A Chain A, Crystal Structure Of Threonine 3-Dehydrogenase Length = 343

Iteration: 1
 Score =  151 bits (381), Expect = 6e-37,   Method: Compositional matrix adjust.
 Identities = 108/332 (32%), Positives = 171/332 (51%), Gaps = 14/332 (4%)
Query: 36  LPSLGPYDVLVRMKAVGICGSDVHYLKTLRCADFVVKEPMVIGHECAGVIEKVGSEVKTL 95
           +P  GP ++LVR++A  ICG+D+H  K    A   ++ P+V GHE +GV+E VG  V+  
Sbjct: 20  VPEPGPGEILVRVEAASICGTDLHIWKWDAWARGRIRPPLVTGHEFSGVVEAVGPGVRRP 79
Query: 96  VPGDRVALEPGISCWRCDHCKGGRYNLCPEMKFFATPPVHGSLANQVVHPADLCFKLPDN 155
             GD V+LE  I C  C  C+ G Y++C   +        G  A  VV PA+  +  P +
Sbjct: 80  QVGDHVSLESHIVCHACPACRTGNYHVCLNTQILGV-DRDGGFAEYVVVPAENAWVNPKD 138
Query: 156 VSLEEGAMCEPLSVGLHACRRANIGPETNVLIMGAGPIGLVTMLGAPRAFGAPRIVIVDV 215
           +  E  A+ EP    +H     +     +VLI GAGPIGL+  +   RA GA  I++ D 
Sbjct: 139 LPFEVAAILEPFGNAVHTVYAGSGVSGKSVLITGAGPIGLMAAM-VVRASGAGPILVSDP 197
Query: 216 DDYRLSVAKEIGADNIVKVSTNLQDIAEEVEKIQKAMGTGIDVSFDCAGLNKTMSTALGA 275
           + YRL+ A+   AD +V     L++  + +E +++  G+G++V  + +G    +   L A
Sbjct: 198 NPYRLAFARPY-ADRLVN---PLEE--DLLEVVRRVTGSGVEVLLEFSGNEAAIHQGLMA 251
Query: 276 TCAGGKVCLVGMGHHEMTVPLTPAAV-REVDVVGVF--RYKNTWPLCLELLRSGKIDVKP 332
              GG+  ++G+    +   L    V R +   G+   R   TW     L+ SG++D+ P
Sbjct: 252 LIPGGEARILGIPSDPIRFDLAGELVMRGITAFGIAGRRLWQTWMQGTALVYSGRVDLSP 311
Query: 333 LVTHRFGFSQKEVEEAFETSARGGTAIKVMFN 364
           L+THR   S+    EAF   A  G A+KV+ +
Sbjct: 312 LLTHRLPLSR--YREAFGLLA-SGQAVKVILD 340

>pdb|4A2C|A Chain A, Crystal Structure Of Galactitol-1-Phosphate Dehydrogenase From Escherichia Coli Length = 346

Iteration: 1
 Score =  132 bits (331), Expect = 4e-31,   Method: Compositional matrix adjust.
 Identities = 104/344 (30%), Positives = 160/344 (46%), Gaps = 49/344 (14%)
Query: 43  DVLVRMKAVGICGSDV--------HYLKTLRCADFVVKEPMVIGHECAGVIEKVGSEVKT 94
           +V V++ + G+CGSD+        HY             P+ +GHE +G I+ VGS V  
Sbjct: 27  EVRVKIASSGLCGSDLPRIFKNGAHYY------------PITLGHEFSGYIDAVGSGVDD 74
Query: 95  LVPGDRVALEPGISCWRCDHCKGGRYNLCPEMKFFATPPVHGSLANQVVHPADLCFKLPD 154
           L PGD VA  P + C+ C  C  G Y+ C +  F  +    G  A  +V      F LP 
Sbjct: 75  LHPGDAVACVPLLPCFTCPECLKGFYSQCAKYDFIGSRR-DGGFAEYIVVKRKNVFALPT 133
Query: 155 NVSLEEGAMCEPLSVGLHACRRANIGPETNVLIMGAGPIGLVTMLGAPRAFGAPRIVIVD 214
           ++ +E+GA  EP++VGLHA   A      NV+I+GAG IGL+ +  A  A GA  +  +D
Sbjct: 134 DMPIEDGAFIEPITVGLHAFHLAQGCENKNVIIIGAGTIGLLAIQCA-VALGAKSVTAID 192
Query: 215 VDDYRLSVAKEIGADNIVKVST----NLQDIAEEVEKIQKAMGTGIDVSFDCAGLNKTMS 270
           +   +L++AK  GA      S      +Q +  E+   Q  + T        AG+ +T+ 
Sbjct: 193 ISSEKLALAKSFGAMQTFNSSEMSAPQMQSVLRELRFNQLILET--------AGVPQTVE 244
Query: 271 TALGATCAGGKVCLVGMGHHEMTVPLTPAAV-----REVDVVGVF-RYKNTWP-----LC 319
            A+       ++ LVG  H ++   LT A       +E+ V+G +  Y + WP       
Sbjct: 245 LAVEIAGPHAQLALVGTLHQDLH--LTSATFGKILRKELTVIGSWMNYSSPWPGQEWETA 302
Query: 320 LELLRSGKIDVKPLVTHRFGFSQKEVEEAFETSARGGTAIKVMF 363
             LL   K+ ++PL+ HR  F  +   +A    AR     KV+ 
Sbjct: 303 SRLLTERKLSLEPLIAHRGSF--ESFAQAVRDIARNAMPGKVLL 344

>pdb|4ILK|A Chain A, Crystal Structure Of Short Chain Alcohol Dehydrogenase (rspb) From E. Coli Cft073 (efi Target Efi-506413) Complexed With Cofactor Nadh Length = 359

Iteration: 1
 Score =  127 bits (318), Expect = 1e-29,   Method: Compositional matrix adjust.
 Identities = 93/320 (29%), Positives = 142/320 (44%), Gaps = 18/320 (5%)
Query: 27  NTLKIQPFELPSLGPYDVLVRMKAVGICGSDVHYLKTLRCADFVVKEPMVIGHECAGVIE 86
           N L I   E+P+    +V V++K  GICGSD H     R  +   K P VIGHE  GVI+
Sbjct: 30  NQLSIIEREIPTPSAGEVRVKVKLAGICGSDSH---IYRGHNPFAKYPRVIGHEFFGVID 86
Query: 87  KVGSEVKTLVPGDRVALEPGISCWRCDHCKGGRYNLCPEMKFFATPPVH--GSLANQVVH 144
            VG  V++   G+RVA++P +SC  C  C  G+ N+C  +       VH  G  +   V 
Sbjct: 87  AVGEGVESARVGERVAVDPVVSCGHCYPCSIGKPNVCTTLAVLG---VHADGGFSEYAVV 143
Query: 145 PADLCFKLPDNVSLEEGAMCEPLSVGLHACRRANIGPETNVLIMGAGPIGLVTMLGAPRA 204
           PA   +K+P+ V+ +   M EP ++  +            VL+ GAGPIGL  +      
Sbjct: 144 PAKNAWKIPEAVADQYAVMIEPFTIAANVTGHGQPTENDTVLVYGAGPIGLTIVQVLKGV 203
Query: 205 FGAPRIVIVDVDDYRLSVAKEIGADNIVKVSTNL--QDIAEEVEKIQKAMGTGIDVSFDC 262
           +    +++ D  D RL  AKE GAD  +  S     +  AE+        G    +  D 
Sbjct: 204 YNVKNVIVADRIDERLEKAKESGADWAINNSQTPLGESFAEK--------GIKPTLIIDA 255
Query: 263 AGLNKTMSTALGATCAGGKVCLVGMGHHEMTVPLTPAAVREVDVVGVFRYKNTWPLCLEL 322
           A     +  A+       ++ L+G       V       +E+ +       N +P+ ++ 
Sbjct: 256 ACHPSILKEAVTLASPAARIVLMGFSSEPSEVIQQGITGKELSIFSSRLNANKFPVVIDW 315
Query: 323 LRSGKIDVKPLVTHRFGFSQ 342
           L  G I  + L+TH F F  
Sbjct: 316 LSKGLIKPEKLITHTFDFQH 335

>pdb|1RJW|A Chain A, Crystal Structure Of Nad(+)-Dependent Alcohol Dehydrogenase From Bacillus Stearothermophilus Strain Lld-R Length = 339

Iteration: 1
 Score =  119 bits (299), Expect = 2e-27,   Method: Compositional matrix adjust.
 Identities = 106/348 (30%), Positives = 164/348 (47%), Gaps = 35/348 (10%)
Query: 29  LKIQPFELPSLGPYDVLVRMKAVGICGSDVHYLKTLRCADFVVKE--PMVIGHECAGVIE 86
           LKI+  E P++   +VLVR+KA G+C +D+H        D+ VK   P++ GHE  G++E
Sbjct: 13  LKIKEVEKPTISYGEVLVRIKACGVCHTDLHAAH----GDWPVKPKLPLIPGHEGVGIVE 68
Query: 87  KVGSEVKTLVPGDRVALEPGI--SCWRCDHCKGGRYNLCPEMKFFATPPVHGSLANQVVH 144
           +VG  V  L  GDRV + P +  +C  CD+C  G+  LC   K  A   V G  A     
Sbjct: 69  EVGPGVTHLKVGDRVGI-PWLYSACGHCDYCLSGQETLCEHQK-NAGYSVDGGYAEYCRA 126
Query: 145 PADLCFKLPDNVSLEEGA--MCEPLSVGLHACRRANIGPETNVLIMGAGPIGLVTMLGAP 202
            AD   K+PDN+S EE A   C  ++    A +     P   V I G G +G V +  A 
Sbjct: 127 AADYVVKIPDNLSFEEAAPIFCAGVTT-YKALKVTGAKPGEWVAIYGIGGLGHVAVQYA- 184
Query: 203 RAFGAPRIVIVDVDDYRLSVAKEIGADNIVKVSTNLQDIAEEVEKIQKAMGTGIDVSFDC 262
           +A G   +V VD+ D +L +AKE+GAD +V        + E+  K  K    G+  +   
Sbjct: 185 KAMGL-NVVAVDIGDEKLELAKELGADLVV------NPLKEDAAKFMKEKVGGVHAAVVT 237
Query: 263 AGLNKTMSTALGATCAGGKVCLVGMGHHEMTVPLTPAAVREVDVVG-VFRYKNTWPLCLE 321
           A       +A  +   GG   LVG+   EM +P+    +  + ++G +   +      L+
Sbjct: 238 AVSKPAFQSAYNSIRRGGACVLVGLPPEEMPIPIFDTVLNGIKIIGSIVGTRKDLQEALQ 297
Query: 322 LLRSGK----IDVKPLVTHRFGFSQKEVEEAFETSARGGTAIKVMFNL 365
               GK    I+V+PL         +++ E F+   +G    +V+  L
Sbjct: 298 FAAEGKVKTIIEVQPL---------EKINEVFDRMLKGQINGRVVLTL 336

>pdb|3PII|A Chain A, Crystal Structure Of Mutant Of Ht- Alcohol Dehydrogenase With Substrate Analogue Butyramide Length = 339

Iteration: 1
 Score =  119 bits (298), Expect = 3e-27,   Method: Compositional matrix adjust.
 Identities = 106/348 (30%), Positives = 163/348 (46%), Gaps = 35/348 (10%)
Query: 29  LKIQPFELPSLGPYDVLVRMKAVGICGSDVHYLKTLRCADFVVKE--PMVIGHECAGVIE 86
           LKI+  E P++   +VLVR+KA G+C +D+H        D+ VK   P++ GHE  G++E
Sbjct: 13  LKIKEVEKPTISYGEVLVRIKACGVCHTDLHAAH----GDWPVKPKLPLIPGHEGVGIVE 68
Query: 87  KVGSEVKTLVPGDRVALEPGI--SCWRCDHCKGGRYNLCPEMKFFATPPVHGSLANQVVH 144
           +VG  V  L  GDRV + P +  +C  CD+C  G+  LC   K  A   V G  A     
Sbjct: 69  EVGPGVTHLKVGDRVGI-PWLYSACGHCDYCLSGQETLCEHQK-NAGYSVDGGYAEYCRA 126
Query: 145 PADLCFKLPDNVSLEEGA--MCEPLSVGLHACRRANIGPETNVLIMGAGPIGLVTMLGAP 202
            AD   K+PDN+S EE A   C  ++    A +     P   V I G G  G V +  A 
Sbjct: 127 AADYVVKIPDNLSFEEAAPIFCAGVTT-YKALKVTGAKPGEWVAIYGIGGFGHVAVQYA- 184
Query: 203 RAFGAPRIVIVDVDDYRLSVAKEIGADNIVKVSTNLQDIAEEVEKIQKAMGTGIDVSFDC 262
           +A G   +V VD+ D +L +AKE+GAD +V        + E+  K  K    G+  +   
Sbjct: 185 KAMGL-NVVAVDIGDEKLELAKELGADLVV------NPLKEDAAKFMKEKVGGVHAAVVT 237
Query: 263 AGLNKTMSTALGATCAGGKVCLVGMGHHEMTVPLTPAAVREVDVVG-VFRYKNTWPLCLE 321
           A       +A  +   GG   LVG+   EM +P+    +  + ++G +   +      L+
Sbjct: 238 AVSKPAFQSAYNSIRRGGACVLVGLPPEEMPIPIFDTVLNGIKIIGSIVGTRKDLQEALQ 297
Query: 322 LLRSGK----IDVKPLVTHRFGFSQKEVEEAFETSARGGTAIKVMFNL 365
               GK    I+V+PL         +++ E F+   +G    +V+  L
Sbjct: 298 FAAEGKVKTIIEVQPL---------EKINEVFDRMLKGQINGRVVLTL 336

>pdb|2EIH|A Chain A, Crystal Structure Of Nad-Dependent Alcohol Dehydrogenase Length = 343

Iteration: 1
 Score =  112 bits (279), Expect = 4e-25,   Method: Compositional matrix adjust.
 Identities = 96/316 (30%), Positives = 147/316 (46%), Gaps = 19/316 (6%)
Query: 25  GVNTLKIQPFELPSLGPYDVLVRMKAVGICGSDVHYLKTLRCADFVVKEPMVIGHECAGV 84
           G   L++    +P  GP +V VR+KA  +   DV   K +      +  P V+G + +GV
Sbjct: 11  GPEVLEVADLPVPEPGPKEVRVRLKAAALNHLDVWVRKGVASPKLPL--PHVLGADGSGV 68
Query: 85  IEKVGSEVKTLVPGDRVALEPGISCWRCDHCKGGRYNLCPEMKFFATPPVHGSLANQVVH 144
           ++ VG  V+   PGD V + PG+SC RC+ C  G  NLCP  +       HG+ A  VV 
Sbjct: 69  VDAVGPGVEGFAPGDEVVINPGLSCGRCERCLAGEDNLCPRYQILGE-HRHGTYAEYVVL 127
Query: 145 PADLCFKLPDNVSLEEGAMCEPLSVGLHACR----RANIGPETNVLIMGAGPIGLVTMLG 200
           P       P N+S EE A   PL+  L A +    +  + P  +VL+M AG    V  + 
Sbjct: 128 PEANLAPKPKNLSFEEAAAI-PLTF-LTAWQMVVDKLGVRPGDDVLVMAAGSGVSVAAIQ 185
Query: 201 APRAFGAPRIVIVDVDDYRLSVAKEIGADNIVKVSTNLQDIAEEVEKIQKAMGTGIDVSF 260
             + FGA R++     + +L  AK +GAD  V  +    D  +EV ++    G G D   
Sbjct: 186 IAKLFGA-RVIATAGSEDKLRRAKALGADETVNYTH--PDWPKEVRRLTG--GKGADKVV 240
Query: 261 DCAGLNKTMSTALGATCAGGKVCLVGMGH-HEMTVPLTPAAVREVDVVG-VFRYKNTWPL 318
           D  G        + AT  GG++ + G    +E T+P      R++ ++G     K+    
Sbjct: 241 DHTG-ALYFEGVIKATANGGRIAIAGASSGYEGTLPFAHVFYRQLSILGSTMASKSRLFP 299
Query: 319 CLELLRSGKIDVKPLV 334
            L  +  GK+  KP+V
Sbjct: 300 ILRFVEEGKL--KPVV 313

>pdb|2EER|A Chain A, Structural Study Of Project Id St2577 From Sulfolobus Tokodaii Strain7 Length = 347

Iteration: 1
 Score =  111 bits (277), Expect = 8e-25,   Method: Compositional matrix adjust.
 Identities = 99/331 (29%), Positives = 153/331 (46%), Gaps = 18/331 (5%)
Query: 29  LKIQPFELPSLGPYDVLVRMKAVGICGSDVHYLK----TLRCA-DFVVKEPMVIGHECAG 83
           LK++   +P      VL++++A G+C SDVH  +     LR   D  VK P+ +GHE AG
Sbjct: 13  LKLEDIPIPKPKGSQVLIKIEAAGVCHSDVHMRQGRFGNLRIVEDLGVKLPVTLGHEIAG 72
Query: 84  VIEKVGSEVKTLVPGDRVALEPGISCWRCDHCKGGRYNLCPEMKFFATPPVHGSLANQVV 143
            IE+VG EV     GD VA+ P      C +C+ G  +LC   ++       G+ A  V+
Sbjct: 73  RIEEVGDEVVGYSKGDLVAVNPWEGEGNCYYCRIGEEHLCDSPRWLGI-NYDGAYAEYVL 131
Query: 144 HP-ADLCFKLPDNVSLEEGAMCEPLSVGLHACRRANIGPETNVLIMGAGPIGLVTM-LGA 201
            P     +KL    ++E   +         A R+A++ P   ++++GAG  GL TM +  
Sbjct: 132 VPHYKYLYKLRRLSAVEAAPLTCSGVTTYRAVRKASLDPSKTLVVIGAGG-GLGTMAIQI 190
Query: 202 PRAFGAPRIVIVDVDDYRLSVAKEIGADNIVKVSTNLQDIAEEVEKIQKAMGTGIDVSFD 261
            +A     I+ VDV +  L  AK  GAD ++  S+  QD   E+ +I +  G G D   D
Sbjct: 191 AKAVSGATIIGVDVREEALEAAKRAGADYVINASS--QDPVSEIRRITQ--GKGADAVID 246
Query: 262 CAGLNKTMSTALGATCAGGKVCLVGMGHHEMTVPLTPAAVREVDVVGVFRYKNTWPL-CL 320
                KT+S         GK  +VG+   ++        + EV  +G      +  L  +
Sbjct: 247 LNNSEKTLSIYPYVLAKQGKYVMVGLFGADLKYHAPLITLNEVQFIGSLVGNQSDFLGIM 306
Query: 321 ELLRSGKIDVKPLVTHRFGFSQKEVEEAFET 351
            L  +GK  VKP+VT       +E  EA + 
Sbjct: 307 SLAEAGK--VKPMVTKTMKL--EEANEAIDN 333

>pdb|4EEZ|A Chain A, Crystal Structure Of Lactococcus Lactis Alcohol Dehydrogenase Variant Re1 Length = 348

Iteration: 1
 Score =  108 bits (269), Expect = 6e-24,   Method: Compositional matrix adjust.
 Identities = 89/308 (28%), Positives = 154/308 (50%), Gaps = 19/308 (6%)
Query: 35  ELPSLGPYDVLVRMKAVGICGSDVHYLKTLRCADFVVKEPMVIGHECAGVIEKVGSEVKT 94
           EL ++ P + L+ M+  G+C +D+H    +   DF  K   V+GHE  G+++++G++V +
Sbjct: 20  ELRAIKPNEALLDMEYCGVCHTDLH----VAAGDFGNKAGTVLGHEGIGIVKEIGADVSS 75
Query: 95  LVPGDRVALEPGIS-CWRCDHCKGGRYNLCPEMKFFATPPVHGSLANQVVHPADLCFKLP 153
           L  GDRV++      C  C++C  G    C E+K  A   V G +A + +  AD   K+P
Sbjct: 76  LQVGDRVSVAWFFEGCGHCEYCVSGNETFCREVK-NAGYSVDGGMAEEAIVVADYAVKVP 134
Query: 154 DNVSLEEGAMCEPLSVGLH-ACRRANIGPETNVLIMGAGPIGLVTMLGAPRAFGAPRIVI 212
           D +   E +      V  + A + + + P    +I GAG +G + +  A   FGA +++ 
Sbjct: 135 DGLDPIEASSITCAGVTTYKAIKVSGVKPGDWQVIFGAGGLGNLAIQYAKNVFGA-KVIA 193
Query: 213 VDVDDYRLSVAKEIGADNIVKVSTNLQDI--AEEVEKIQKAMGTGIDVSFDCAGLNKTMS 270
           VD++  +L++AK+IGAD    V+ N  D+   +E++KI    G G+  +  CA       
Sbjct: 194 VDINQDKLNLAKKIGAD----VTINSGDVNPVDEIKKITG--GLGVQSAIVCAVARIAFE 247
Query: 271 TALGATCAGGKVCLVGMGHHEMTVPLTPAAVREVDVVG-VFRYKNTWPLCLELLRSGKID 329
            A+ +    GK+  V + + EMT+ +       V+V G +   +       +    GK  
Sbjct: 248 QAVASLKPMGKMVAVAVPNTEMTLSVPTVVFDGVEVAGSLVGTRLDLAEAFQFGAEGK-- 305
Query: 330 VKPLVTHR 337
           VKP+V  R
Sbjct: 306 VKPIVATR 313

>pdb|4EEX|A Chain A, Crystal Structure Of Lactococcus Lactis Alcohol Dehydrogenase Length = 348

Iteration: 1
 Score =  107 bits (266), Expect = 1e-23,   Method: Compositional matrix adjust.
 Identities = 88/308 (28%), Positives = 154/308 (50%), Gaps = 19/308 (6%)
Query: 35  ELPSLGPYDVLVRMKAVGICGSDVHYLKTLRCADFVVKEPMVIGHECAGVIEKVGSEVKT 94
           EL ++ P + L+ M+  G+C +D+H    +   D+  K   V+GHE  G+++++G++V +
Sbjct: 20  ELRAIKPNEALLDMEYCGVCHTDLH----VAAGDYGNKAGTVLGHEGIGIVKEIGADVSS 75
Query: 95  LVPGDRVALEPGIS-CWRCDHCKGGRYNLCPEMKFFATPPVHGSLANQVVHPADLCFKLP 153
           L  GDRV++      C  C++C  G    C E+K  A   V G +A + +  AD   K+P
Sbjct: 76  LQVGDRVSVAWFFEGCGHCEYCVSGNETFCREVK-NAGYSVDGGMAEEAIVVADYAVKVP 134
Query: 154 DNVSLEEGAMCEPLSVGLH-ACRRANIGPETNVLIMGAGPIGLVTMLGAPRAFGAPRIVI 212
           D +   E +      V  + A + + + P    +I GAG +G + +  A   FGA +++ 
Sbjct: 135 DGLDPIEASSITCAGVTTYKAIKVSGVKPGDWQVIFGAGGLGNLAIQYAKNVFGA-KVIA 193
Query: 213 VDVDDYRLSVAKEIGADNIVKVSTNLQDI--AEEVEKIQKAMGTGIDVSFDCAGLNKTMS 270
           VD++  +L++AK+IGAD I+    N  D+   +E++KI    G G+  +  CA       
Sbjct: 194 VDINQDKLNLAKKIGADVII----NSGDVNPVDEIKKITG--GLGVQSAIVCAVARIAFE 247
Query: 271 TALGATCAGGKVCLVGMGHHEMTVPLTPAAVREVDVVG-VFRYKNTWPLCLELLRSGKID 329
            A+ +    GK+  V + + EMT+ +       V+V G +   +       +    GK  
Sbjct: 248 QAVASLKPMGKMVAVALPNTEMTLSVPTVVFDGVEVAGSLVGTRLDLAEAFQFGAEGK-- 305
Query: 330 VKPLVTHR 337
           VKP+V  R
Sbjct: 306 VKPIVATR 313

>pdb|1E3L|A Chain A, P47h Mutant Of Mouse Class Ii Alcohol Dehydrogenase Complex With Nadh Length = 376

Iteration: 1
 Score =  105 bits (262), Expect = 4e-23,   Method: Compositional matrix adjust.
 Identities = 96/352 (27%), Positives = 159/352 (45%), Gaps = 43/352 (12%)
Query: 21  AWLLGVNTLKIQPFELPSLGPYDVLVRMKAVGICGSDVHYLKTLRCADFVVKEPMVIGHE 80
           AW  G + L I+  E+      +V +++ A  +C +D++     + A F    P+V+GHE
Sbjct: 14  AWKTG-SPLCIEEIEVSPPKACEVRIQVIATCVCHTDINATDPKKKALF----PVVLGHE 68
Query: 81  CAGVIEKVGSEVKTLVPGDRVALEPGISCWRCDHCKGGRYNLCPEMKFFATPPVHGSLAN 140
           CAG++E VG  V    PGD+V       C RC  C     NLC +++ F  P +   L  
Sbjct: 69  CAGIVESVGPGVTNFKPGDKVIPFFAPQCKRCKLCLSPLTNLCGKLRNFKYPTIDQELME 128
Query: 141 Q-------------------------VVHPADLCFKLPDNVSLEEGAM--CEPLSVGLHA 173
                                     VV  A+L  ++ D  +LE   +  C   S    A
Sbjct: 129 DRTSRFTCKGRSIYHFMGVSSFSQYTVVSEANLA-RVDDEANLERVCLIGCGFSSGYGAA 187
Query: 174 CRRANIGPETNVLIMGAGPIGLVTMLGAPRAFGAPRIVIVDVDDYRLSVAKEIGADNIVK 233
              A + P +   + G G +GL  ++G   A GA RI+ +D++  +   AK +GA + + 
Sbjct: 188 INTAKVTPGSTCAVFGLGCVGLSAIIGCKIA-GASRIIAIDINGEKFPKAKALGATDCL- 245
Query: 234 VSTNLQDIAEEVEK-IQKAMGTGIDVSFDCAGLNKTMSTALGATCAG-GKVCLVGMGHHE 291
              N +++ + V+  I +    G+D S DCAG  +T+  A+  T  G G   +VG    E
Sbjct: 246 ---NPRELDKPVQDVITELTAGGVDYSLDCAGTAQTLKAAVDCTVLGWGSCTVVGAKVDE 302
Query: 292 MTVPLTPAAV-REVD--VVGVFRYKNTWPLCLELLRSGKIDVKPLVTHRFGF 340
           MT+P     + R ++    G ++  ++ P  +   ++ K D+  LVTH   F
Sbjct: 303 MTIPTVDVILGRSINGTFFGGWKSVDSVPNLVSDYKNKKFDLDLLVTHALPF 354

>pdb|1E3E|A Chain A, Mouse Class Ii Alcohol Dehydrogenase Complex With Nadh Length = 376

Iteration: 1
 Score =  105 bits (262), Expect = 4e-23,   Method: Compositional matrix adjust.
 Identities = 96/352 (27%), Positives = 159/352 (45%), Gaps = 43/352 (12%)
Query: 21  AWLLGVNTLKIQPFELPSLGPYDVLVRMKAVGICGSDVHYLKTLRCADFVVKEPMVIGHE 80
           AW  G + L I+  E+      +V +++ A  +C +D++     + A F    P+V+GHE
Sbjct: 14  AWKTG-SPLCIEEIEVSPPKACEVRIQVIATCVCPTDINATDPKKKALF----PVVLGHE 68
Query: 81  CAGVIEKVGSEVKTLVPGDRVALEPGISCWRCDHCKGGRYNLCPEMKFFATPPVHGSLAN 140
           CAG++E VG  V    PGD+V       C RC  C     NLC +++ F  P +   L  
Sbjct: 69  CAGIVESVGPGVTNFKPGDKVIPFFAPQCKRCKLCLSPLTNLCGKLRNFKYPTIDQELME 128
Query: 141 Q-------------------------VVHPADLCFKLPDNVSLEEGAM--CEPLSVGLHA 173
                                     VV  A+L  ++ D  +LE   +  C   S    A
Sbjct: 129 DRTSRFTCKGRSIYHFMGVSSFSQYTVVSEANLA-RVDDEANLERVCLIGCGFSSGYGAA 187
Query: 174 CRRANIGPETNVLIMGAGPIGLVTMLGAPRAFGAPRIVIVDVDDYRLSVAKEIGADNIVK 233
              A + P +   + G G +GL  ++G   A GA RI+ +D++  +   AK +GA + + 
Sbjct: 188 INTAKVTPGSTCAVFGLGCVGLSAIIGCKIA-GASRIIAIDINGEKFPKAKALGATDCL- 245
Query: 234 VSTNLQDIAEEVEK-IQKAMGTGIDVSFDCAGLNKTMSTALGATCAG-GKVCLVGMGHHE 291
              N +++ + V+  I +    G+D S DCAG  +T+  A+  T  G G   +VG    E
Sbjct: 246 ---NPRELDKPVQDVITELTAGGVDYSLDCAGTAQTLKAAVDCTVLGWGSCTVVGAKVDE 302
Query: 292 MTVPLTPAAV-REVD--VVGVFRYKNTWPLCLELLRSGKIDVKPLVTHRFGF 340
           MT+P     + R ++    G ++  ++ P  +   ++ K D+  LVTH   F
Sbjct: 303 MTIPTVDVILGRSINGTFFGGWKSVDSVPNLVSDYKNKKFDLDLLVTHALPF 354

>pdb|1EE2|B Chain B, The Structure Of Steroid-Active Alcohol Dehydrogenase At 1.54 A Resolution Length = 373

Iteration: 1
 Score =  104 bits (259), Expect = 1e-22,   Method: Compositional matrix adjust.
 Identities = 98/372 (26%), Positives = 163/372 (43%), Gaps = 54/372 (14%)
Query: 29  LKIQPFELPSLGPYDVLVRMKAVGICGSDVHYLKTLRCADFVVKEPMVIGHECAGVIEKV 88
             I+  E+     ++V ++M A GIC SD H +        V   P++ GHE AG++E +
Sbjct: 21  FSIEEVEVAPPKAHEVRIKMVAAGICRSDDHVVS----GTLVAPLPVIAGHEAAGIVESI 76
Query: 89  GSEVKTLVPGDRVALEPGISCWRCDHCKGGRYNLCPEMKFFATP---------------- 132
           G  V T+ PGD+V       C +C  CK    NLC  +K  + P                
Sbjct: 77  GEGVTTVRPGDKVIPLFIPQCGKCSVCKHPEGNLC--LKNLSMPRGTMQDGTSRFTCRGK 134
Query: 133 PVHGSLANQVVHPADLCFKLPDNVSLEEGAMCEPL----------SVGL-HACRRANIGP 181
           P+H  L           + + D +S+ +     PL          S G   A + A +  
Sbjct: 135 PIHHFLGTSTFSQ----YTVVDEISVAKIDAASPLEKVCLVGCGFSTGYGSAVKVAKVTQ 190
Query: 182 ETNVLIMGAGPIGLVTMLGAPRAFGAPRIVIVDVDDYRLSVAKEIGADNIVKVSTNLQDI 241
            +   + G G +GL  ++G  +A GA RI+ VD++  + + AKE+GA   V    N QD 
Sbjct: 191 GSTCAVFGLGGVGLSVIMGC-KAAGAARIIGVDINKDKFAKAKEVGATECV----NPQDY 245
Query: 242 AEEVEKIQKAMGT-GIDVSFDCAGLNKTMSTALGATC--AGGKVCLVGMGHHEMTVPLTP 298
            + ++++   M   G+D SF+  G   TM  AL + C  A G   +VG+      + + P
Sbjct: 246 KKPIQEVLTEMSNGGVDFSFEVIGRLDTMVAAL-SCCQEAYGVSVIVGVPPDSQNLSMNP 304
Query: 299 -----AAVREVDVVGVFRYKNTWPLCLELLRSGKIDVKPLVTHRFGFSQKEVEEAFETSA 353
                    +  + G F+ K++ P  +    + K  + PL+TH   F  +++ E F+   
Sbjct: 305 MLLLSGRTWKGAIFGGFKSKDSVPKLVADFMAKKFALDPLITHVLPF--EKINEGFDL-L 361
Query: 354 RGGTAIKVMFNL 365
           R G +I+ +   
Sbjct: 362 RSGKSIRTILTF 373

>pdb|1EE2|A Chain A, The Structure Of Steroid-Active Alcohol Dehydrogenase At 1.54 A Resolution Length = 373

Iteration: 1
 Score =  103 bits (258), Expect = 1e-22,   Method: Compositional matrix adjust.
 Identities = 98/372 (26%), Positives = 163/372 (43%), Gaps = 54/372 (14%)
Query: 29  LKIQPFELPSLGPYDVLVRMKAVGICGSDVHYLKTLRCADFVVKEPMVIGHECAGVIEKV 88
             I+  E+     ++V ++M A GIC SD H +        V   P++ GHE AG++E +
Sbjct: 21  FSIEEVEVAPPKAHEVRIKMVAAGICRSDDHVVS----GTLVAPLPVIAGHEAAGIVESI 76
Query: 89  GSEVKTLVPGDRVALEPGISCWRCDHCKGGRYNLCPEMKFFATP---------------- 132
           G  V T+ PGD+V       C +C  CK    NLC  +K  + P                
Sbjct: 77  GEGVTTVRPGDKVIPLFIPQCGKCSVCKHPEGNLC--LKNLSMPRGTMQDGTSRFTCRGK 134
Query: 133 PVHGSLANQVVHPADLCFKLPDNVSLEEGAMCEPL----------SVGL-HACRRANIGP 181
           P+H  L           + + D +S+ +     PL          S G   A + A +  
Sbjct: 135 PIHHFLGTSTFSQ----YTVVDEISVAKIDAASPLEKVCLVGCGFSTGYGSAVKVAKVTQ 190
Query: 182 ETNVLIMGAGPIGLVTMLGAPRAFGAPRIVIVDVDDYRLSVAKEIGADNIVKVSTNLQDI 241
            +   + G G +GL  ++G  +A GA RI+ VD++  + + AKE+GA   V    N QD 
Sbjct: 191 GSTCAVFGLGGVGLSVIMGC-KAAGAARIIGVDINKDKFAKAKEVGATECV----NPQDY 245
Query: 242 AEEVEKIQKAMGT-GIDVSFDCAGLNKTMSTALGATC--AGGKVCLVGMGHHEMTVPLTP 298
            + ++++   M   G+D SF+  G   TM  AL + C  A G   +VG+      + + P
Sbjct: 246 KKPIQEVLTEMSNGGVDFSFEVIGRLDTMVAAL-SCCQEAYGVSVIVGVPPDSQNLSMNP 304
Query: 299 -----AAVREVDVVGVFRYKNTWPLCLELLRSGKIDVKPLVTHRFGFSQKEVEEAFETSA 353
                    +  + G F+ K++ P  +    + K  + PL+TH   F  +++ E F+   
Sbjct: 305 MLLLSGRTWKGAIFGGFKSKDSVPKLVADFMAKKFALDPLITHVLPF--EKINEGFDL-L 361
Query: 354 RGGTAIKVMFNL 365
           R G +I+ +   
Sbjct: 362 RSGKSIRTILTF 373

>pdb|1MGO|A Chain A, Horse Liver Alcohol Dehydrogenase Phe93ala Mutant Length = 374

Iteration: 1
 Score =  103 bits (257), Expect = 1e-22,   Method: Compositional matrix adjust.
 Identities = 97/372 (26%), Positives = 162/372 (43%), Gaps = 53/372 (14%)
Query: 29  LKIQPFELPSLGPYDVLVRMKAVGICGSDVHYLKTLRCADFVVKEPMVIGHECAGVIEKV 88
             I+  E+     ++V ++M A GIC SD H +        V   P++ GHE AG++E +
Sbjct: 21  FSIEEVEVAPPKAHEVRIKMVATGICRSDDHVVS----GTLVTPLPVIAGHEAAGIVESI 76
Query: 89  GSEVKTLVPGDRVALEPGISCWRCDHCKGGRYNLCPEMKFFATP---------------- 132
           G  V T+ PGD+V       C +C  CK    N C +    + P                
Sbjct: 77  GEGVTTVRPGDKVIPLATPQCGKCRVCKHPEGNFCLKNDL-SMPRGTMQDGTSRFTCRGK 135
Query: 133 PVHGSLANQVVHPADLCFKLPDNVSLEEGAMCEPL----------SVGL-HACRRANIGP 181
           P+H  L           + + D +S+ +     PL          S G   A + A +  
Sbjct: 136 PIHHFLGTSTFSQ----YTVVDEISVAKIDAASPLEKVCLIGCGFSTGYGSAVKVAKVTQ 191
Query: 182 ETNVLIMGAGPIGLVTMLGAPRAFGAPRIVIVDVDDYRLSVAKEIGADNIVKVSTNLQDI 241
            +   + G G +GL  ++G  +A GA RI+ VD++  + + AKE+GA   V    N QD 
Sbjct: 192 GSTCAVFGLGGVGLSVIMGC-KAAGAARIIGVDINKDKFAKAKEVGATECV----NPQDY 246
Query: 242 AEEVEKIQKAMGT-GIDVSFDCAGLNKTMSTALGATC--AGGKVCLVGMGHHEMTVPLTP 298
            + ++++   M   G+D SF+  G   TM TAL + C  A G   +VG+      + + P
Sbjct: 247 KKPIQEVLTEMSNGGVDFSFEVIGRLDTMVTAL-SCCQEAYGVSVIVGVPPDSQNLSMNP 305
Query: 299 -----AAVREVDVVGVFRYKNTWPLCLELLRSGKIDVKPLVTHRFGFSQKEVEEAFETSA 353
                    +  + G F+ K++ P  +    + K  + PL+TH   F  +++ E F+   
Sbjct: 306 MLLLSGRTWKGAIFGGFKSKDSVPKLVADFMAKKFALDPLITHVLPF--EKINEGFDL-L 362
Query: 354 RGGTAIKVMFNL 365
           R G +I+ +   
Sbjct: 363 RSGESIRTILTF 374

>pdb|1HDZ|A Chain A, Three-Dimensional Structures Of Three Human Alcohol Dehydrogenase Variants: Correlations With Their Functional Differences Length = 374

Iteration: 1
 Score =  103 bits (256), Expect = 2e-22,   Method: Compositional matrix adjust.
 Identities = 94/355 (26%), Positives = 156/355 (43%), Gaps = 48/355 (13%)
Query: 29  LKIQPFELPSLGPYDVLVRMKAVGICGSDVHYLKTLRCADFVVKEPMVIGHECAGVIEKV 88
             I+  E+     Y+V ++M AVGICG+D H +      + V   P+++GHE AG++E V
Sbjct: 21  FSIEDVEVAPPKAYEVRIKMVAVGICGTDDHVVS----GNLVTPLPVILGHEAAGIVESV 76
Query: 89  GSEVKTLVPGDRVALEPGISCWRCDHCKGGRYNLCPE-------------MKFFAT--PP 133
           G  V T+ PGD+V       C +C  CK    N C +              + F     P
Sbjct: 77  GEGVTTVKPGDKVIPLFTPQCGKCRVCKNPESNYCLKNDLGNPRGTLQDGTRRFTCRGKP 136
Query: 134 VHGSLANQVVHPADLCFKLPDNVSLEEGAMCEPL----------SVGL-HACRRANIGPE 182
           +H  L           + + D  ++ +     PL          S G   A   A + P 
Sbjct: 137 IHHFLGTSTFSQ----YTVVDENAVAKIDAASPLEKVCLIGCGFSTGYGSAVNVAKVTPG 192
Query: 183 TNVLIMGAGPIGLVTMLGAPRAFGAPRIVIVDVDDYRLSVAKEIGADNIVKVSTNLQDIA 242
           +   + G G +GL  ++G  +A GA RI+ VD++  + + AKE+GA   +    N QD  
Sbjct: 193 STCAVFGLGGVGLSAVMGC-KAAGAARIIAVDINKDKFAKAKELGATECI----NPQDYK 247
Query: 243 EEVEKIQKAMGT-GIDVSFDCAG-LNKTMSTALGATCAGGKVCLVGMGHHEMTVPLTP-- 298
           + ++++ K M   G+D SF+  G L+  M++ L    A G   +VG+      + + P  
Sbjct: 248 KPIQEVLKEMTDGGVDFSFEVIGRLDTMMASLLCCHEACGTSVIVGVPPASQNLSINPML 307
Query: 299 ---AAVREVDVVGVFRYKNTWPLCLELLRSGKIDVKPLVTHRFGFSQKEVEEAFE 350
                  +  V G F+ K   P  +    + K  +  L+TH   F  +++ E F+
Sbjct: 308 LLTGRTWKGAVYGGFKSKEGIPKLVADFMAKKFSLDALITHVLPF--EKINEGFD 360

>pdb|6ADH|A Chain A, Structure Of Triclinic Ternary Complex Of Horse Liver Alcohol Dehydrogenase At 2.9 Angstroms Resolution Length = 374

Iteration: 1
 Score =  102 bits (255), Expect = 3e-22,   Method: Compositional matrix adjust.
 Identities = 97/372 (26%), Positives = 162/372 (43%), Gaps = 53/372 (14%)
Query: 29  LKIQPFELPSLGPYDVLVRMKAVGICGSDVHYLKTLRCADFVVKEPMVIGHECAGVIEKV 88
             I+  E+     ++V ++M A GIC SD H +        V   P++ GHE AG++E +
Sbjct: 21  FSIEEVEVAPPKAHEVRIKMVATGICRSDDHVVS----GTLVTPLPVIAGHEAAGIVESI 76
Query: 89  GSEVKTLVPGDRVALEPGISCWRCDHCKGGRYNLCPEMKFFATP---------------- 132
           G  V T+ PGD+V       C +C  CK    N C +    + P                
Sbjct: 77  GEGVTTVRPGDKVIPLFTPQCGKCRVCKHPEGNFCLKNDL-SMPRGTMQDGTSRFTCRGK 135
Query: 133 PVHGSLANQVVHPADLCFKLPDNVSLEEGAMCEPL----------SVGL-HACRRANIGP 181
           P+H  L           + + D +S+ +     PL          S G   A + A +  
Sbjct: 136 PIHHFLGTSTFSQ----YTVVDEISVAKIDAASPLEKVCLIGCGFSTGYGSAVKVAKVTQ 191
Query: 182 ETNVLIMGAGPIGLVTMLGAPRAFGAPRIVIVDVDDYRLSVAKEIGADNIVKVSTNLQDI 241
            +   + G G +GL  ++G  +A GA RI+ VD++  + + AKE+GA   V    N QD 
Sbjct: 192 GSTCAVFGLGGVGLSVIMGC-KAAGAARIIGVDINKDKFAKAKEVGATECV----NPQDY 246
Query: 242 AEEVEKIQKAMGT-GIDVSFDCAGLNKTMSTALGATC--AGGKVCLVGMGHHEMTVPLTP 298
            + ++++   M   G+D SF+  G   TM TAL + C  A G   +VG+      + + P
Sbjct: 247 KKPIQEVLTEMSNGGVDFSFEVIGRLDTMVTAL-SCCQEAYGVSVIVGVPPDSQNLSMNP 305
Query: 299 -----AAVREVDVVGVFRYKNTWPLCLELLRSGKIDVKPLVTHRFGFSQKEVEEAFETSA 353
                    +  + G F+ K++ P  +    + K  + PL+TH   F  +++ E F+   
Sbjct: 306 MLLLSGRTWKGAIFGGFKSKDSVPKLVADFMAKKFALDPLITHVLPF--EKINEGFDL-L 362
Query: 354 RGGTAIKVMFNL 365
           R G +I+ +   
Sbjct: 363 RSGESIRTILTF 374

>pdb|1AXE|A Chain A, Crystal Structure Of The Active-Site Mutant Phe93->trp Of Horse Liver Alcohol Dehydrogenase In Complex With Nad And Inhibitor Trifluoroethanol Length = 374

Iteration: 1
 Score =  102 bits (254), Expect = 3e-22,   Method: Compositional matrix adjust.
 Identities = 97/372 (26%), Positives = 162/372 (43%), Gaps = 53/372 (14%)
Query: 29  LKIQPFELPSLGPYDVLVRMKAVGICGSDVHYLKTLRCADFVVKEPMVIGHECAGVIEKV 88
             I+  E+     ++V ++M A GIC SD H +        V   P++ GHE AG++E +
Sbjct: 21  FSIEEVEVAPPKAHEVRIKMVATGICRSDDHVVS----GTLVTPLPVIAGHEAAGIVESI 76
Query: 89  GSEVKTLVPGDRVALEPGISCWRCDHCKGGRYNLCPEMKFFATP---------------- 132
           G  V T+ PGD+V       C +C  CK    N C +    + P                
Sbjct: 77  GEGVTTVRPGDKVIPLWTPQCGKCRVCKHPEGNFCLKNDL-SMPRGTMQDGTSRFTCRGK 135
Query: 133 PVHGSLANQVVHPADLCFKLPDNVSLEEGAMCEPL----------SVGL-HACRRANIGP 181
           P+H  L           + + D +S+ +     PL          S G   A + A +  
Sbjct: 136 PIHHFLGTSTFSQ----YTVVDEISVAKIDAASPLEKVCLIGCGFSTGYGSAVKVAKVTQ 191
Query: 182 ETNVLIMGAGPIGLVTMLGAPRAFGAPRIVIVDVDDYRLSVAKEIGADNIVKVSTNLQDI 241
            +   + G G +GL  ++G  +A GA RI+ VD++  + + AKE+GA   V    N QD 
Sbjct: 192 GSTCAVFGLGGVGLSVIMGC-KAAGAARIIGVDINKDKFAKAKEVGATECV----NPQDY 246
Query: 242 AEEVEKIQKAMGT-GIDVSFDCAGLNKTMSTALGATC--AGGKVCLVGMGHHEMTVPLTP 298
            + ++++   M   G+D SF+  G   TM TAL + C  A G   +VG+      + + P
Sbjct: 247 KKPIQEVLTEMSNGGVDFSFEVIGRLDTMVTAL-SCCQEAYGVSVIVGVPPDSQNLSMNP 305
Query: 299 -----AAVREVDVVGVFRYKNTWPLCLELLRSGKIDVKPLVTHRFGFSQKEVEEAFETSA 353
                    +  + G F+ K++ P  +    + K  + PL+TH   F  +++ E F+   
Sbjct: 306 MLLLSGRTWKGAIFGGFKSKDSVPKLVADFMAKKFALDPLITHVLPF--EKINEGFDL-L 362
Query: 354 RGGTAIKVMFNL 365
           R G +I+ +   
Sbjct: 363 RSGESIRTILTF 374

>pdb|3OQ6|A Chain A, Horse Liver Alcohol Dehydrogenase A317c Mutant Complexed With Nad+ And 2,3,4,5,6-Pentafluorobenzyl Alcohol Length = 374

Iteration: 1
 Score =  102 bits (254), Expect = 4e-22,   Method: Compositional matrix adjust.
 Identities = 97/372 (26%), Positives = 162/372 (43%), Gaps = 53/372 (14%)
Query: 29  LKIQPFELPSLGPYDVLVRMKAVGICGSDVHYLKTLRCADFVVKEPMVIGHECAGVIEKV 88
             I+  E+     ++V ++M A GIC SD H +        V   P++ GHE AG++E +
Sbjct: 21  FSIEEVEVAPPKAHEVRIKMVATGICRSDDHVVS----GTLVTPLPVIAGHEAAGIVESI 76
Query: 89  GSEVKTLVPGDRVALEPGISCWRCDHCKGGRYNLCPEMKFFATP---------------- 132
           G  V T+ PGD+V       C +C  CK    N C +    + P                
Sbjct: 77  GEGVTTVRPGDKVIPLFTPQCGKCRVCKHPEGNFCLKNDL-SMPRGTMQDGTSRFTCRGK 135
Query: 133 PVHGSLANQVVHPADLCFKLPDNVSLEEGAMCEPL----------SVGL-HACRRANIGP 181
           P+H  L           + + D +S+ +     PL          S G   A + A +  
Sbjct: 136 PIHHFLGTSTFSQ----YTVVDEISVAKIDAASPLEKVCLIGCGFSTGYGSAVKVAKVTQ 191
Query: 182 ETNVLIMGAGPIGLVTMLGAPRAFGAPRIVIVDVDDYRLSVAKEIGADNIVKVSTNLQDI 241
            +   + G G +GL  ++G  +A GA RI+ VD++  + + AKE+GA   V    N QD 
Sbjct: 192 GSTCAVFGLGGVGLSVIMGC-KAAGAARIIGVDINKDKFAKAKEVGATECV----NPQDY 246
Query: 242 AEEVEKIQKAMGT-GIDVSFDCAGLNKTMSTALGATC--AGGKVCLVGMGHHEMTVPLTP 298
            + ++++   M   G+D SF+  G   TM TAL + C  A G   +VG+      + + P
Sbjct: 247 KKPIQEVLTEMSNGGVDFSFEVIGRLDTMVTAL-SCCQEAYGVSVIVGVPPDSQNLSMNP 305
Query: 299 AAVREVD-----VVGVFRYKNTWPLCLELLRSGKIDVKPLVTHRFGFSQKEVEEAFETSA 353
             +         + G F+ K++ P  +    + K  + PL+TH   F  +++ E F+   
Sbjct: 306 MLLLSGRTWKGCIFGGFKSKDSVPKLVADFMAKKFALDPLITHVLPF--EKINEGFDL-L 362
Query: 354 RGGTAIKVMFNL 365
           R G +I+ +   
Sbjct: 363 RSGESIRTILTF 374

>pdb|2XAA|A Chain A, Alcohol Dehydrogenase Adh-'a' From Rhodococcus Ruber Dsm 44541 At Ph 8.5 In Complex With Nad And Butane-1,4-Diol Length = 345

Iteration: 1
 Score =  101 bits (252), Expect = 6e-22,   Method: Compositional matrix adjust.
 Identities = 93/336 (27%), Positives = 146/336 (43%), Gaps = 34/336 (10%)
Query: 37  PSLGPYDVLVRMKAVGICGSDVHYLKTLRCADFVVKEPMVIGHECAGVIEKVGSEVKTLV 96
           P+ GP ++L+++ A G+C SD+ ++  +  A +    P+ +GHE  G + ++G  V    
Sbjct: 21  PTPGPGEILLKVTAAGLCHSDI-FVMDMPAAQYAYGLPLTLGHEGVGTVAELGEGVTGFG 79
Query: 97  PGDRVALEPGISCWRCDHCKGGRYNLCPEMKFFA-TPPVHGSLANQ----VVHPADLCFK 151
            GD VA+     C  C  C  GR N C        TPP  GS  +     +V  A     
Sbjct: 80  VGDAVAVYGPWGCGACHACARGRENYCTRAADLGITPPGLGSPGSMAEYMIVDSARHLVP 139
Query: 152 LPDNVSLEEGAMCEPLSVGLHACRRAN--IGPETNVLIMGAGPIGLVTMLGAPRAFGAPR 209
           + D   +    + +      HA  R    +GP +  +++G G +G V +    RA  A R
Sbjct: 140 IGDLDPVAAAPLTDAGLTPYHAISRVLPLLGPGSTAVVIGVGGLGHVGIQ-ILRAVSAAR 198
Query: 210 IVIVDVDDYRLSVAKEIGADNIVKVSTNLQDIAEEVEKIQKAMGTGIDVSFDCAGLNKTM 269
           ++ VD+DD RL++A+E+GAD  VK      D   E+       G G    FD  G   T+
Sbjct: 199 VIAVDLDDDRLALAREVGADAAVKSGAGAADAIRELTG-----GQGATAVFDFVGAQSTI 253
Query: 270 STALGATCAGGKVCLVGM---GHHEMTVPLTPAAVREVDVVGVFRYKNTWPLCLE---LL 323
            TA       G + +VG+    H ++   + P     V       Y  T    +E   L 
Sbjct: 254 DTAQQVVAVDGHISVVGIHAGAHAKVGFFMIPFGASVVT-----PYWGTRSELMEVVALA 308
Query: 324 RSGKIDVKPLVTHRFGFSQKEVEEAF----ETSARG 355
           R+G++D+     H   F+  E   A+    E S RG
Sbjct: 309 RAGRLDI-----HTETFTLDEGPAAYRRLREGSIRG 339

>pdb|1QV6|A Chain A, Horse Liver Alcohol Dehydrogenase His51glnLYS228ARG MUTANT Complexed With Nad+ And 2,4-Difluorobenzyl Alcohol Length = 374

Iteration: 1
 Score =  101 bits (251), Expect = 7e-22,   Method: Compositional matrix adjust.
 Identities = 97/372 (26%), Positives = 161/372 (43%), Gaps = 53/372 (14%)
Query: 29  LKIQPFELPSLGPYDVLVRMKAVGICGSDVHYLKTLRCADFVVKEPMVIGHECAGVIEKV 88
             I+  E+     ++V ++M A GIC SD   +        V   P++ GHE AG++E +
Sbjct: 21  FSIEEVEVAPPKAHEVRIKMVATGICRSDDQVVS----GTLVTPLPVIAGHEAAGIVESI 76
Query: 89  GSEVKTLVPGDRVALEPGISCWRCDHCKGGRYNLCPEMKFFATP---------------- 132
           G  V T+ PGD+V       C +C  CK    N C +    + P                
Sbjct: 77  GEGVTTVRPGDKVIPLFTPQCGKCRVCKHPEGNFCLKNDL-SMPRGTMQDGTSRFTCRGK 135
Query: 133 PVHGSLANQVVHPADLCFKLPDNVSLEEGAMCEPL----------SVGL-HACRRANIGP 181
           P+H  L           + + D +S+ +     PL          S G   A + A +  
Sbjct: 136 PIHHFLGTSTFSQ----YTVVDEISVAKIDAASPLEKVCLIGCGFSTGYGSAVKVAKVTQ 191
Query: 182 ETNVLIMGAGPIGLVTMLGAPRAFGAPRIVIVDVDDYRLSVAKEIGADNIVKVSTNLQDI 241
            +   + G G +GL  ++G  +A GA RI+ VD++  R + AKE+GA   V    N QD 
Sbjct: 192 GSTCAVFGLGGVGLSVIMGC-KAAGAARIIGVDINKDRFAKAKEVGATECV----NPQDY 246
Query: 242 AEEVEKIQKAMGT-GIDVSFDCAGLNKTMSTALGATC--AGGKVCLVGMGHHEMTVPLTP 298
            + ++++   M   G+D SF+  G   TM TAL + C  A G   +VG+      + + P
Sbjct: 247 KKPIQEVLTEMSNGGVDFSFEVIGRLDTMVTAL-SCCQEAYGVSVIVGVPPDSQNLSMNP 305
Query: 299 -----AAVREVDVVGVFRYKNTWPLCLELLRSGKIDVKPLVTHRFGFSQKEVEEAFETSA 353
                    +  + G F+ K++ P  +    + K  + PL+TH   F  +++ E F+   
Sbjct: 306 MLLLSGRTWKGAIFGGFKSKDSVPKLVADFMAKKFALDPLITHVLPF--EKINEGFDL-L 362
Query: 354 RGGTAIKVMFNL 365
           R G +I+ +   
Sbjct: 363 RSGESIRTILTF 374

>pdb|1N8K|A Chain A, Horse Liver Alcohol Dehydrogenase Val292thr Mutant Complexed To Nad+ And Pyrazole Length = 374

Iteration: 1
 Score =  101 bits (251), Expect = 8e-22,   Method: Compositional matrix adjust.
 Identities = 96/372 (25%), Positives = 161/372 (43%), Gaps = 53/372 (14%)
Query: 29  LKIQPFELPSLGPYDVLVRMKAVGICGSDVHYLKTLRCADFVVKEPMVIGHECAGVIEKV 88
             I+  E+     ++V ++M A GIC SD H +        V   P++ GHE AG++E +
Sbjct: 21  FSIEEVEVAPPKAHEVRIKMVATGICRSDDHVVS----GTLVTPLPVIAGHEAAGIVESI 76
Query: 89  GSEVKTLVPGDRVALEPGISCWRCDHCKGGRYNLCPEMKFFATP---------------- 132
           G  V T+ PGD+V       C +C  CK    N C +    + P                
Sbjct: 77  GEGVTTVRPGDKVIPLFTPQCGKCRVCKHPEGNFCLKNDL-SMPRGTMQDGTSRFTCRGK 135
Query: 133 PVHGSLANQVVHPADLCFKLPDNVSLEEGAMCEPL----------SVGL-HACRRANIGP 181
           P+H  L           + + D +S+ +     PL          S G   A + A +  
Sbjct: 136 PIHHFLGTSTFSQ----YTVVDEISVAKIDAASPLEKVCLIGCGFSTGYGSAVKVAKVTQ 191
Query: 182 ETNVLIMGAGPIGLVTMLGAPRAFGAPRIVIVDVDDYRLSVAKEIGADNIVKVSTNLQDI 241
            +   + G G +GL  ++G  +A GA RI+ VD++  + + AKE+GA   V    N QD 
Sbjct: 192 GSTCAVFGLGGVGLSVIMGC-KAAGAARIIGVDINKDKFAKAKEVGATECV----NPQDY 246
Query: 242 AEEVEKIQKAMGT-GIDVSFDCAGLNKTMSTALGATC--AGGKVCLVGMGHHEMTVPLTP 298
            + ++++   M   G+D SF+  G   TM TAL + C  A G   + G+      + + P
Sbjct: 247 KKPIQEVLTEMSNGGVDFSFEVIGRLDTMVTAL-SCCQEAYGVSVITGVPPDSQNLSMNP 305
Query: 299 -----AAVREVDVVGVFRYKNTWPLCLELLRSGKIDVKPLVTHRFGFSQKEVEEAFETSA 353
                    +  + G F+ K++ P  +    + K  + PL+TH   F  +++ E F+   
Sbjct: 306 MLLLSGRTWKGAIFGGFKSKDSVPKLVADFMAKKFALDPLITHVLPF--EKINEGFDL-L 362
Query: 354 RGGTAIKVMFNL 365
           R G +I+ +   
Sbjct: 363 RSGESIRTILTF 374

>pdb|3FPL|A Chain A, Chimera Of Alcohol Dehydrogenase By Exchange Of The Cofactor Binding Domain Res 153-295 Of C. Beijerinckii Adh By T. Brockii Adh Length = 351

Iteration: 1
 Score =  101 bits (251), Expect = 8e-22,   Method: Compositional matrix adjust.
 Identities = 103/353 (29%), Positives = 153/353 (43%), Gaps = 50/353 (14%)
Query: 23  LLGVNTLKIQPFELPSLGPYDVLVRMKAVGICGSDVHYLKTLRCADFVVKEPMVIGHECA 82
           +LG+N L     E P  G YD +VR  AV  C SD+H +      D   ++ M++GHE  
Sbjct: 6   MLGINKLGWIEKERPVAGSYDAIVRPLAVSPCTSDIHTVFEGALGD---RKNMILGHEAV 62
Query: 83  GVIEKVGSEVKTLVPGDRVALEPGISCWRCDHCKGGRYNLCPEM----KFFATPP-VHGS 137
           G + +VGSEVK   PGDRV +      WR    + G       M    KF      V G 
Sbjct: 63  GEVVEVGSEVKDFKPGDRVIVPCTTPDWRSLEVQAGFQQHSNGMLAGWKFSNFKDGVFGE 122
Query: 138 LANQVVHPADLCFK-LPDNVSLEEGAM-CEPLSVGLHACRRANIGPETNVLIMGAGPIGL 195
             +  V+ AD+    LP ++ LE   M  + ++ G H    A+I     V ++G GP+GL
Sbjct: 123 YFH--VNDADMNLAILPKDMPLENAVMITDMMTTGFHGAELADIELGATVAVLGIGPVGL 180
Query: 196 VTMLGAPRAFGAPRIVIVDVDDYRLSVAKEIGADNIVKVSTNLQDIAEEVEKIQKAMGTG 255
           + + GA +  GA RI+ V      +  AK  GA +IV    N +D   E + +    G G
Sbjct: 181 MAVAGA-KLRGAGRIIAVGSRPVCVDAAKYYGATDIV----NYKDGPIESQIMNLTEGKG 235
Query: 256 IDVSFDCAGLNKTMSTALGATCAGGKVCLV------------------GMGHHEMTVPLT 297
           +D +    G    M+TA+     GG +  V                  GM H  +   L 
Sbjct: 236 VDAAIIAGGNADIMATAVKIVKPGGTIANVNYFGEGEVLPVPRLEWGCGMAHKTIKGGLC 295
Query: 298 PAAVREVDVVGVFRYKNTWPLCLELLRSGKIDVKPLVTHRF-GFSQKEVEEAF 349
           P         G  R +    +  +++   ++D+  LVTH + GF    +EEA 
Sbjct: 296 PG--------GRLRAE----MLRDMVVYNRVDLSKLVTHVYHGFDH--IEEAL 334

>pdb|1AXG|A Chain A, Crystal Structure Of The Val203->ala Mutant Of Liver Alcohol Dehydrogenase Complexed With Cofactor Nad And Inhibitor Trifluoroethanol Solved To 2.5 Angstrom Resolution Length = 374

Iteration: 1
 Score =  101 bits (251), Expect = 8e-22,   Method: Compositional matrix adjust.
 Identities = 97/372 (26%), Positives = 161/372 (43%), Gaps = 53/372 (14%)
Query: 29  LKIQPFELPSLGPYDVLVRMKAVGICGSDVHYLKTLRCADFVVKEPMVIGHECAGVIEKV 88
             I+  E+     ++V ++M A GIC SD H +        V   P++ GHE AG++E +
Sbjct: 21  FSIEEVEVAPPKAHEVRIKMVATGICRSDDHVVS----GTLVTPLPVIAGHEAAGIVESI 76
Query: 89  GSEVKTLVPGDRVALEPGISCWRCDHCKGGRYNLCPEMKFFATP---------------- 132
           G  V T+ PGD+V       C +C  CK    N C +    + P                
Sbjct: 77  GEGVTTVRPGDKVIPLFTPQCGKCRVCKHPEGNFCLKNDL-SMPRGTMQDGTSRFTCRGK 135
Query: 133 PVHGSLANQVVHPADLCFKLPDNVSLEEGAMCEPL----------SVGL-HACRRANIGP 181
           P+H  L           + + D +S+ +     PL          S G   A + A +  
Sbjct: 136 PIHHFLGTSTFSQ----YTVVDEISVAKIDAASPLEKVCLIGCGFSTGYGSAVKVAKVTQ 191
Query: 182 ETNVLIMGAGPIGLVTMLGAPRAFGAPRIVIVDVDDYRLSVAKEIGADNIVKVSTNLQDI 241
            +   + G G  GL  ++G  +A GA RI+ VD++  + + AKE+GA   V    N QD 
Sbjct: 192 GSTCAVFGLGGAGLSVIMGC-KAAGAARIIGVDINKDKFAKAKEVGATECV----NPQDY 246
Query: 242 AEEVEKIQKAMGT-GIDVSFDCAGLNKTMSTALGATC--AGGKVCLVGMGHHEMTVPLTP 298
            + ++++   M   G+D SF+  G   TM TAL + C  A G   +VG+      + + P
Sbjct: 247 KKPIQEVLTEMSNGGVDFSFEVIGRLDTMVTAL-SCCQEAYGVSVIVGVPPDSQNLSMNP 305
Query: 299 -----AAVREVDVVGVFRYKNTWPLCLELLRSGKIDVKPLVTHRFGFSQKEVEEAFETSA 353
                    +  + G F+ K++ P  +    + K  + PL+TH   F  +++ E F+   
Sbjct: 306 MLLLSGRTWKGAIFGGFKSKDSVPKLVADFMAKKFALDPLITHVLPF--EKINEGFDL-L 362
Query: 354 RGGTAIKVMFNL 365
           R G +I+ +   
Sbjct: 363 RSGESIRTILTF 374

>pdb|2NVB|A Chain A, Contribution Of Pro275 To The Thermostability Of The Alcohol Dehydrogenases (Adhs) Length = 352

Iteration: 1
 Score =  100 bits (250), Expect = 9e-22,   Method: Compositional matrix adjust.
 Identities = 101/341 (29%), Positives = 148/341 (43%), Gaps = 50/341 (14%)
Query: 35  ELPSLGPYDVLVRMKAVGICGSDVHYLKTLRCADFVVKEPMVIGHECAGVIEKVGSEVKT 94
           E P+ GP+D +VR  AV  C SD+H   T+       +  M++GHE  G + +VGSEVK 
Sbjct: 18  EKPAPGPFDAIVRPLAVAPCTSDIH---TVFEGAIGERHNMILGHEAVGEVVEVGSEVKD 74
Query: 95  LVPGDRVALEPGISCWRCDHCKGGRYNLCPEM----KFFATPP-VHGSLANQVVHPADLC 149
             PGDRV +      WR    + G +     M    KF      V G   +  V+ AD+ 
Sbjct: 75  FKPGDRVVVPAITPDWRTSEVQRGYHQHSGGMLAGWKFSNVKDGVFGEFFH--VNDADMN 132
Query: 150 F-KLPDNVSLEEGAMC-EPLSVGLHACRRANIGPETNVLIMGAGPIGLVTMLGAPRAFGA 207
              LP  + LE   M  + ++ G H    A+I     V ++G GP+GL+ + GA +  GA
Sbjct: 133 LAHLPKEIPLEAAVMIPDMMTTGFHGAELADIELGATVAVLGIGPVGLMAVAGA-KLRGA 191
Query: 208 PRIVIVDVDDYRLSVAKEIGADNIVKVSTNLQDIAEEVEKIQKAMGTGIDVSFDCAGLNK 267
            RI+ V      +  AK  GA +IV    N +D   E + +    G G+D +    G   
Sbjct: 192 GRIIAVGSRPVCVDAAKYYGATDIV----NYKDGPIESQIMNLTEGKGVDAAIIAGGNAD 247
Query: 268 TMSTALGATCAGGKVCLV------------------GMGHHEMTVPLTPAAVREVDVVGV 309
            M+TA+     GG +  V                  GM H  +   L P         G 
Sbjct: 248 IMATAVKIVKPGGTIANVNYFGEGEVLDVPRLEWGCGMAHKTIKGGLCPG--------GR 299
Query: 310 FRYKNTWPLCLELLRSGKIDVKPLVTHRF-GFSQKEVEEAF 349
            R +      ++L+   ++D   LVTH F GF    +E+AF
Sbjct: 300 LRMER----LIDLVFYKRVDPSKLVTHVFRGFDN--IEKAF 334

>pdb|1QLH|A Chain A, Horse Liver Alcohol Dehydrogenase Complexed To Nad Double Mutant Of Gly 293 Ala And Pro 295 Thr Length = 374

Iteration: 1
 Score =  100 bits (250), Expect = 9e-22,   Method: Compositional matrix adjust.
 Identities = 96/372 (25%), Positives = 161/372 (43%), Gaps = 53/372 (14%)
Query: 29  LKIQPFELPSLGPYDVLVRMKAVGICGSDVHYLKTLRCADFVVKEPMVIGHECAGVIEKV 88
             I+  E+     ++V ++M A GIC SD H +        V   P++ GHE AG++E +
Sbjct: 21  FSIEEVEVAPPKAHEVRIKMVATGICRSDDHVVS----GTLVTPLPVIAGHEAAGIVESI 76
Query: 89  GSEVKTLVPGDRVALEPGISCWRCDHCKGGRYNLCPEMKFFATP---------------- 132
           G  V T+ PGD+V       C +C  CK    N C +    + P                
Sbjct: 77  GEGVTTVRPGDKVIPLFTPQCGKCRVCKHPEGNFCLKNDL-SMPRGTMQDGTSRFTCRGK 135
Query: 133 PVHGSLANQVVHPADLCFKLPDNVSLEEGAMCEPL----------SVGL-HACRRANIGP 181
           P+H  L           + + D +S+ +     PL          S G   A + A +  
Sbjct: 136 PIHHFLGTSTFSQ----YTVVDEISVAKIDAASPLEKVCLIGCGFSTGYGSAVKVAKVTQ 191
Query: 182 ETNVLIMGAGPIGLVTMLGAPRAFGAPRIVIVDVDDYRLSVAKEIGADNIVKVSTNLQDI 241
            +   + G G +GL  ++G  +A GA RI+ VD++  + + AKE+GA   V    N QD 
Sbjct: 192 GSTCAVFGLGGVGLSVIMGC-KAAGAARIIGVDINKDKFAKAKEVGATECV----NPQDY 246
Query: 242 AEEVEKIQKAMGT-GIDVSFDCAGLNKTMSTALGATC--AGGKVCLVGMGHHEMTVPLTP 298
            + ++++   M   G+D SF+  G   TM TAL + C  A G   +V +      + + P
Sbjct: 247 KKPIQEVLTEMSNGGVDFSFEVIGRLDTMVTAL-SCCQEAYGVSVIVAVTPDSQNLSMNP 305
Query: 299 -----AAVREVDVVGVFRYKNTWPLCLELLRSGKIDVKPLVTHRFGFSQKEVEEAFETSA 353
                    +  + G F+ K++ P  +    + K  + PL+TH   F  +++ E F+   
Sbjct: 306 MLLLSGRTWKGAIFGGFKSKDSVPKLVADFMAKKFALDPLITHVLPF--EKINEGFDL-L 362
Query: 354 RGGTAIKVMFNL 365
           R G +I+ +   
Sbjct: 363 RSGESIRTILTF 374

>pdb|1A71|A Chain A, Ternary Complex Of An Active Site Double Mutant Of Horse Liver Alcohol Dehydrogenase, Phe93>trp, Val203>ala With Nad And Trifluoroethanol Length = 374

Iteration: 1
 Score =  100 bits (250), Expect = 9e-22,   Method: Compositional matrix adjust.
 Identities = 97/372 (26%), Positives = 161/372 (43%), Gaps = 53/372 (14%)
Query: 29  LKIQPFELPSLGPYDVLVRMKAVGICGSDVHYLKTLRCADFVVKEPMVIGHECAGVIEKV 88
             I+  E+     ++V ++M A GIC SD H +        V   P++ GHE AG++E +
Sbjct: 21  FSIEEVEVAPPKAHEVRIKMVATGICRSDDHVVS----GTLVTPLPVIAGHEAAGIVESI 76
Query: 89  GSEVKTLVPGDRVALEPGISCWRCDHCKGGRYNLCPEMKFFATP---------------- 132
           G  V T+ PGD+V       C +C  CK    N C +    + P                
Sbjct: 77  GEGVTTVRPGDKVIPLWTPQCGKCRVCKHPEGNFCLKNDL-SMPRGTMQDGTSRFTCRGK 135
Query: 133 PVHGSLANQVVHPADLCFKLPDNVSLEEGAMCEPL----------SVGL-HACRRANIGP 181
           P+H  L           + + D +S+ +     PL          S G   A + A +  
Sbjct: 136 PIHHFLGTSTFSQ----YTVVDEISVAKIDAASPLEKVCLIGCGFSTGYGSAVKVAKVTQ 191
Query: 182 ETNVLIMGAGPIGLVTMLGAPRAFGAPRIVIVDVDDYRLSVAKEIGADNIVKVSTNLQDI 241
            +   + G G  GL  ++G  +A GA RI+ VD++  + + AKE+GA   V    N QD 
Sbjct: 192 GSTCAVFGLGGAGLSVIMGC-KAAGAARIIGVDINKDKFAKAKEVGATECV----NPQDY 246
Query: 242 AEEVEKIQKAMGT-GIDVSFDCAGLNKTMSTALGATC--AGGKVCLVGMGHHEMTVPLTP 298
            + ++++   M   G+D SF+  G   TM TAL + C  A G   +VG+      + + P
Sbjct: 247 KKPIQEVLTEMSNGGVDFSFEVIGRLDTMVTAL-SCCQEAYGVSVIVGVPPDSQNLSMNP 305
Query: 299 -----AAVREVDVVGVFRYKNTWPLCLELLRSGKIDVKPLVTHRFGFSQKEVEEAFETSA 353
                    +  + G F+ K++ P  +    + K  + PL+TH   F  +++ E F+   
Sbjct: 306 MLLLSGRTWKGAIFGGFKSKDSVPKLVADFMAKKFALDPLITHVLPF--EKINEGFDL-L 362
Query: 354 RGGTAIKVMFNL 365
           R G +I+ +   
Sbjct: 363 RSGESIRTILTF 374

>pdb|1YKF|A Chain A, Nadp-Dependent Alcohol Dehydrogenase From Thermoanaerobium Brockii Length = 352

Iteration: 1
 Score =  100 bits (250), Expect = 9e-22,   Method: Compositional matrix adjust.
 Identities = 101/341 (29%), Positives = 148/341 (43%), Gaps = 50/341 (14%)
Query: 35  ELPSLGPYDVLVRMKAVGICGSDVHYLKTLRCADFVVKEPMVIGHECAGVIEKVGSEVKT 94
           E P+ GP+D +VR  AV  C SD+H   T+       +  M++GHE  G + +VGSEVK 
Sbjct: 18  EKPAPGPFDAIVRPLAVAPCTSDIH---TVFEGAIGERHNMILGHEAVGEVVEVGSEVKD 74
Query: 95  LVPGDRVALEPGISCWRCDHCKGGRYNLCPEM----KFFATPP-VHGSLANQVVHPADLC 149
             PGDRV +      WR    + G +     M    KF      V G   +  V+ AD+ 
Sbjct: 75  FKPGDRVVVPAITPDWRTSEVQRGYHQHSGGMLAGWKFSNVKDGVFGEFFH--VNDADMN 132
Query: 150 F-KLPDNVSLEEGAMC-EPLSVGLHACRRANIGPETNVLIMGAGPIGLVTMLGAPRAFGA 207
              LP  + LE   M  + ++ G H    A+I     V ++G GP+GL+ + GA +  GA
Sbjct: 133 LAHLPKEIPLEAAVMIPDMMTTGFHGAELADIELGATVAVLGIGPVGLMAVAGA-KLRGA 191
Query: 208 PRIVIVDVDDYRLSVAKEIGADNIVKVSTNLQDIAEEVEKIQKAMGTGIDVSFDCAGLNK 267
            RI+ V      +  AK  GA +IV    N +D   E + +    G G+D +    G   
Sbjct: 192 GRIIAVGSRPVCVDAAKYYGATDIV----NYKDGPIESQIMNLTEGKGVDAAIIAGGNAD 247
Query: 268 TMSTALGATCAGGKVCLV------------------GMGHHEMTVPLTPAAVREVDVVGV 309
            M+TA+     GG +  V                  GM H  +   L P         G 
Sbjct: 248 IMATAVKIVKPGGTIANVNYFGEGEVLPVPRLEWGCGMAHKTIKGGLCPG--------GR 299
Query: 310 FRYKNTWPLCLELLRSGKIDVKPLVTHRF-GFSQKEVEEAF 349
            R +      ++L+   ++D   LVTH F GF    +E+AF
Sbjct: 300 LRMER----LIDLVFYKRVDPSKLVTHVFRGFDN--IEKAF 334

>pdb|1HTB|A Chain A, Crystallization Of Human Beta3 Alcohol Dehydrogenase (10 MgML) IN 100 MM SODIUM PHOSPHATE (PH 7.5), 7.5 MM NAD+ And 1 Mm 4-Iodopyrazole At 25 C Length = 374

Iteration: 1
 Score =  100 bits (250), Expect = 1e-21,   Method: Compositional matrix adjust.
 Identities = 95/367 (25%), Positives = 159/367 (43%), Gaps = 48/367 (13%)
Query: 29  LKIQPFELPSLGPYDVLVRMKAVGICGSDVHYLKTLRCADFVVKEPMVIGHECAGVIEKV 88
             I+  E+     Y+V ++M AVGIC +D H +      + V   P+++GHE AG++E V
Sbjct: 21  FSIEDVEVAPPKAYEVRIKMVAVGICRTDDHVVS----GNLVTPLPVILGHEAAGIVESV 76
Query: 89  GSEVKTLVPGDRVALEPGISCWRCDHCKGGRYNLCPE-------------MKFFAT--PP 133
           G  V T+ PGD+V       C +C  CK    N C +              + F     P
Sbjct: 77  GEGVTTVKPGDKVIPLFTPQCGKCRVCKNPESNYCLKNDLGNPRGTLQDGTRRFTCRGKP 136
Query: 134 VHGSLANQVVHPADLCFKLPDNVSLEEGAMCEPL----------SVGL-HACRRANIGPE 182
           +H  L           + + D  ++ +     PL          S G   A   A + P 
Sbjct: 137 IHHFLGTSTFSQ----YTVVDENAVAKIDAASPLEKVCLIGCGFSTGYGSAVNVAKVTPG 192
Query: 183 TNVLIMGAGPIGLVTMLGAPRAFGAPRIVIVDVDDYRLSVAKEIGADNIVKVSTNLQDIA 242
           +   + G G +GL  ++G  +A GA RI+ VD++  + + AKE+GA   +    N QD  
Sbjct: 193 STCAVFGLGGVGLSAVMGC-KAAGAARIIAVDINKDKFAKAKELGATECI----NPQDYK 247
Query: 243 EEVEKIQKAMGT-GIDVSFDCAG-LNKTMSTALGATCAGGKVCLVGMGHHEMTVPLTP-- 298
           + ++++ K M   G+D SF+  G L+  M++ L    A G   +VG+      + + P  
Sbjct: 248 KPIQEVLKEMTDGGVDFSFEVIGRLDTMMASLLCCHEACGTSVIVGVPPASQNLSINPML 307
Query: 299 ---AAVREVDVVGVFRYKNTWPLCLELLRSGKIDVKPLVTHRFGFSQKEVEEAFETSARG 355
                  +  V G F+ K   P  +    + K  +  L+TH   F  +++ E F+    G
Sbjct: 308 LLTGRTWKGAVYGGFKSKEGIPKLVADFMAKKFSLDALITHVLPF--EKINEGFDLLHSG 365
Query: 356 GTAIKVM 362
            +   V+
Sbjct: 366 KSICTVL 372

>pdb|1JU9|A Chain A, Horse Liver Alcohol Dehydrogenase Val292ser Mutant Length = 374

Iteration: 1
 Score =  100 bits (249), Expect = 1e-21,   Method: Compositional matrix adjust.
 Identities = 96/372 (25%), Positives = 161/372 (43%), Gaps = 53/372 (14%)
Query: 29  LKIQPFELPSLGPYDVLVRMKAVGICGSDVHYLKTLRCADFVVKEPMVIGHECAGVIEKV 88
             I+  E+     ++V ++M A GIC SD H +        V   P++ GHE AG++E +
Sbjct: 21  FSIEEVEVAPPKAHEVRIKMVATGICRSDDHVVS----GTLVTPLPVIAGHEAAGIVESI 76
Query: 89  GSEVKTLVPGDRVALEPGISCWRCDHCKGGRYNLCPEMKFFATP---------------- 132
           G  V T+ PGD+V       C +C  CK    N C +    + P                
Sbjct: 77  GEGVTTVRPGDKVIPLFTPQCGKCRVCKHPEGNFCLKNDL-SMPRGTMQDGTSRFTCRGK 135
Query: 133 PVHGSLANQVVHPADLCFKLPDNVSLEEGAMCEPL----------SVGL-HACRRANIGP 181
           P+H  L           + + D +S+ +     PL          S G   A + A +  
Sbjct: 136 PIHHFLGTSTFSQ----YTVVDEISVAKIDAASPLEKVCLIGCGFSTGYGSAVKVAKVTQ 191
Query: 182 ETNVLIMGAGPIGLVTMLGAPRAFGAPRIVIVDVDDYRLSVAKEIGADNIVKVSTNLQDI 241
            +   + G G +GL  ++G  +A GA RI+ VD++  + + AKE+GA   V    N QD 
Sbjct: 192 GSTCAVFGLGGVGLSVIMGC-KAAGAARIIGVDINKDKFAKAKEVGATECV----NPQDY 246
Query: 242 AEEVEKIQKAMGT-GIDVSFDCAGLNKTMSTALGATC--AGGKVCLVGMGHHEMTVPLTP 298
            + ++++   M   G+D SF+  G   TM TAL + C  A G   + G+      + + P
Sbjct: 247 KKPIQEVLTEMSNGGVDFSFEVIGRLDTMVTAL-SCCQEAYGVSVISGVPPDSQNLSMNP 305
Query: 299 -----AAVREVDVVGVFRYKNTWPLCLELLRSGKIDVKPLVTHRFGFSQKEVEEAFETSA 353
                    +  + G F+ K++ P  +    + K  + PL+TH   F  +++ E F+   
Sbjct: 306 MLLLSGRTWKGAIFGGFKSKDSVPKLVADFMAKKFALDPLITHVLPF--EKINEGFDL-L 362
Query: 354 RGGTAIKVMFNL 365
           R G +I+ +   
Sbjct: 363 RSGESIRTILTF 374

>pdb|1HDY|A Chain A, Three-Dimensional Structures Of Three Human Alcohol Dehydrogenase Variants: Correlations With Their Functional Differences Length = 374

Iteration: 1
 Score =  100 bits (248), Expect = 1e-21,   Method: Compositional matrix adjust.
 Identities = 93/355 (26%), Positives = 155/355 (43%), Gaps = 48/355 (13%)
Query: 29  LKIQPFELPSLGPYDVLVRMKAVGICGSDVHYLKTLRCADFVVKEPMVIGHECAGVIEKV 88
             I+  E+     Y+V ++M AVGIC +D H +      + V   P+++GHE AG++E V
Sbjct: 21  FSIEDVEVAPPKAYEVRIKMVAVGICHTDDHVVS----GNLVTPLPVILGHEAAGIVESV 76
Query: 89  GSEVKTLVPGDRVALEPGISCWRCDHCKGGRYNLCPE-------------MKFFAT--PP 133
           G  V T+ PGD+V       C +C  CK    N C +              + F     P
Sbjct: 77  GEGVTTVKPGDKVIPLFTPQCGKCRVCKNPESNYCLKNDLGNPRGTLQDGTRRFTCRGKP 136
Query: 134 VHGSLANQVVHPADLCFKLPDNVSLEEGAMCEPL----------SVGL-HACRRANIGPE 182
           +H  L           + + D  ++ +     PL          S G   A   A + P 
Sbjct: 137 IHHFLGTSTFSQ----YTVVDENAVAKIDAASPLEKVCLIGCGFSTGYGSAVNVAKVTPG 192
Query: 183 TNVLIMGAGPIGLVTMLGAPRAFGAPRIVIVDVDDYRLSVAKEIGADNIVKVSTNLQDIA 242
           +   + G G +GL  ++G  +A GA RI+ VD++  + + AKE+GA   +    N QD  
Sbjct: 193 STCAVFGLGGVGLSAVMGC-KAAGAARIIAVDINKDKFAKAKELGATECI----NPQDYK 247
Query: 243 EEVEKIQKAMGT-GIDVSFDCAG-LNKTMSTALGATCAGGKVCLVGMGHHEMTVPLTP-- 298
           + ++++ K M   G+D SF+  G L+  M++ L    A G   +VG+      + + P  
Sbjct: 248 KPIQEVLKEMTDGGVDFSFEVIGRLDTMMASLLCCHEACGTSVIVGVPPASQNLSINPML 307
Query: 299 ---AAVREVDVVGVFRYKNTWPLCLELLRSGKIDVKPLVTHRFGFSQKEVEEAFE 350
                  +  V G F+ K   P  +    + K  +  L+TH   F  +++ E F+
Sbjct: 308 LLTGRTWKGAVYGGFKSKEGIPKLVADFMAKKFSLDALITHVLPF--EKINEGFD 360

>pdb|1HDX|A Chain A, Three-Dimensional Structures Of Three Human Alcohol Dehydrogenase Variants: Correlations With Their Functional Differences Length = 374

Iteration: 1
 Score =  100 bits (248), Expect = 2e-21,   Method: Compositional matrix adjust.
 Identities = 93/355 (26%), Positives = 155/355 (43%), Gaps = 48/355 (13%)
Query: 29  LKIQPFELPSLGPYDVLVRMKAVGICGSDVHYLKTLRCADFVVKEPMVIGHECAGVIEKV 88
             I+  E+     Y+V ++M AVGIC +D H +      + V   P+++GHE AG++E V
Sbjct: 21  FSIEDVEVAPPKAYEVRIKMVAVGICRTDDHVVS----GNLVTPLPVILGHEAAGIVESV 76
Query: 89  GSEVKTLVPGDRVALEPGISCWRCDHCKGGRYNLCPE-------------MKFFAT--PP 133
           G  V T+ PGD+V       C +C  CK    N C +              + F     P
Sbjct: 77  GEGVTTVKPGDKVIPLFTPQCGKCRVCKNPESNYCLKNDLGNPRGTLQDGTRRFTCRGKP 136
Query: 134 VHGSLANQVVHPADLCFKLPDNVSLEEGAMCEPL----------SVGL-HACRRANIGPE 182
           +H  L           + + D  ++ +     PL          S G   A   A + P 
Sbjct: 137 IHHFLGTSTFSQ----YTVVDENAVAKIDAASPLEKVCLIGCGFSTGYGSAVNVAKVTPG 192
Query: 183 TNVLIMGAGPIGLVTMLGAPRAFGAPRIVIVDVDDYRLSVAKEIGADNIVKVSTNLQDIA 242
           +   + G G +GL  ++G  +A GA RI+ VD++  + + AKE+GA   +    N QD  
Sbjct: 193 STCAVFGLGGVGLSAVMGC-KAAGAARIIAVDINKDKFAKAKELGATECI----NPQDYK 247
Query: 243 EEVEKIQKAMGT-GIDVSFDCAG-LNKTMSTALGATCAGGKVCLVGMGHHEMTVPLTP-- 298
           + ++++ K M   G+D SF+  G L+  M++ L    A G   +VG+      + + P  
Sbjct: 248 KPIQEVLKEMTDGGVDFSFEVIGRLDTMMASLLCCHEACGTSVIVGVPPASQNLSINPML 307
Query: 299 ---AAVREVDVVGVFRYKNTWPLCLELLRSGKIDVKPLVTHRFGFSQKEVEEAFE 350
                  +  V G F+ K   P  +    + K  +  L+TH   F  +++ E F+
Sbjct: 308 LLTGRTWKGAVYGGFKSKEGIPKLVADFMAKKFSLDALITHVLPF--EKINEGFD 360

>pdb|1HSO|A Chain A, Human Alpha Alcohol Dehydrogenase (Adh1a) Length = 374

Iteration: 1
 Score =  100 bits (248), Expect = 2e-21,   Method: Compositional matrix adjust.
 Identities = 93/351 (26%), Positives = 159/351 (45%), Gaps = 40/351 (11%)
Query: 29  LKIQPFELPSLGPYDVLVRMKAVGICGSDVHYLKTLRCADFVVKEPMVIGHECAGVIEKV 88
             I+  E+     ++V ++M AVGICG+D H +        V   P+++GHE AG++E V
Sbjct: 21  FSIEEVEVAPPKAHEVRIKMVAVGICGTDDHVVS----GTMVTPLPVILGHEAAGIVESV 76
Query: 89  GSEVKTLVPGDRVALEPGISCWRCDHCKGGRYNLC-------PE-------MKFFA-TPP 133
           G  V T+ PGD+V       C +C  CK    N C       P+        +F     P
Sbjct: 77  GEGVTTVKPGDKVIPLAIPQCGKCRICKNPESNYCLKNDVSNPQGTLQDGTSRFTCRRKP 136
Query: 134 VH-----GSLANQVVHPADLCFKLPDNVSLEEGAMCE-PLSVGL-HACRRANIGPETNVL 186
           +H      + +   V   +   K+     LE+  +     S G   A   A + P +   
Sbjct: 137 IHHFLGISTFSQYTVVDENAVAKIDAASPLEKVCLIGCGFSTGYGSAVNVAKVTPGSTCA 196
Query: 187 IMGAGPIGLVTMLGAPRAFGAPRIVIVDVDDYRLSVAKEIGADNIVKVSTNLQDIAEEVE 246
           + G G +GL  ++G  +A GA RI+ VD++  + + AKE+GA   +    N QD  + ++
Sbjct: 197 VFGLGGVGLSAIMGC-KAAGAARIIAVDINKDKFAKAKELGATECI----NPQDYKKPIQ 251
Query: 247 KIQKAMGT-GIDVSFDCAG-LNKTMSTALGATCAGGKVCLVGMGHHEMTVPLTPAAVR-- 302
           ++ K M   G+D SF+  G L+  M++ L    A G   +VG+      + + P  +   
Sbjct: 252 EVLKEMTDGGVDFSFEVIGRLDTMMASLLCCHEACGTSVIVGVPPDSQNLSMNPMLLLTG 311
Query: 303 ---EVDVVGVFRYKNTWPLCLELLRSGKIDVKPLVTHRFGFSQKEVEEAFE 350
              +  ++G F+ K   P  +    + K  +  L+TH   F  +++ E F+
Sbjct: 312 RTWKGAILGGFKSKECVPKLVADFMAKKFSLDALITHVLPF--EKINEGFD 360

>pdb|1HT0|A Chain A, Human Gamma-2 Alcohol Dehydrogense Length = 374

Iteration: 1
 Score =  100 bits (248), Expect = 2e-21,   Method: Compositional matrix adjust.
 Identities = 93/366 (25%), Positives = 164/366 (44%), Gaps = 41/366 (11%)
Query: 29  LKIQPFELPSLGPYDVLVRMKAVGICGSDVHYLKTLRCADFVVKEPMVIGHECAGVIEKV 88
             I+  E+     ++V ++M A GIC SD H +      + V   P+++GHE AG++E V
Sbjct: 21  FSIEEVEVAPPKAHEVRIKMVAAGICRSDEHVVS----GNLVTPLPVILGHEAAGIVESV 76
Query: 89  GSEVKTLVPGDRVALEPGISCWRCDHCKGGRYNLCPE--------------MKFFAT-PP 133
           G  V T+ PGD+V       C +C  CK    N C +               +F  +  P
Sbjct: 77  GEGVTTVKPGDKVIPLFTPQCGKCRICKNPESNYCLKNDLGNPRGTLQDGTRRFTCSGKP 136
Query: 134 VH-----GSLANQVVHPADLCFKLPDNVSLEEGAMCE-PLSVGL-HACRRANIGPETNVL 186
           +H      + +   V   +   K+     LE+  +     S G   A + A + P +   
Sbjct: 137 IHHFVGVSTFSQYTVVDENAVAKIDAASPLEKVCLIGCGFSTGYGSAVKVAKVTPGSTCA 196
Query: 187 IMGAGPIGLVTMLGAPRAFGAPRIVIVDVDDYRLSVAKEIGADNIVKVSTNLQDIAEEVE 246
           + G G +GL  ++G  +A GA RI+ VD++  + + AKE+GA   +    N QD  + ++
Sbjct: 197 VFGLGGVGLSVVMGC-KAAGAARIIAVDINKDKFAKAKELGATECI----NPQDYKKPIQ 251
Query: 247 KIQKAMGT-GIDVSFDCAG-LNKTMSTALGATCAGGKVCLVGMGHHEMTVPLTP-----A 299
           ++ K M   G+D SF+  G L+  M++ L    A G   +VG+      + + P      
Sbjct: 252 EVLKEMTDGGVDFSFEVIGQLDTMMASLLCCHEACGTSVIVGVPPDSQNLSINPMLLLTG 311
Query: 300 AVREVDVVGVFRYKNTWPLCLELLRSGKIDVKPLVTHRFGFSQKEVEEAFETSARGGTAI 359
              +  + G F+ K + P  +    + K  +  L+T+   F  +++ E F+   R G +I
Sbjct: 312 RTWKGAIFGGFKSKESVPKLVADFMAKKFSLDALITNVLPF--EKINEGFDL-LRSGKSI 368
Query: 360 KVMFNL 365
           + +   
Sbjct: 369 RTVLTF 374

>pdb|3MEQ|A Chain A, Crystal Structure Of Alcohol Dehydrogenase From Brucella Mel Length = 365

Iteration: 1
 Score = 98.6 bits (244), Expect = 5e-21,   Method: Compositional matrix adjust.
 Identities = 84/265 (31%), Positives = 124/265 (46%), Gaps = 19/265 (7%)
Query: 29  LKIQPFELPSLGPYDVLVRMKAVGICGSDVHYLKTLRCADFVVKE--PMVIGHECAGVIE 86
           L I    +P  GP  + V ++A G+C +D+H  +     D+ VK   P + GHE  G + 
Sbjct: 38  LTIDEVPIPQPGPGQIQVAIQASGVCHTDLHAAE----GDWPVKPNPPFIPGHEGVGFVS 93
Query: 87  KVGSEVKTLVPGDRVALEPGI--SCWRCDHCKGGRYNLCPEMKFFATPPVHGSLANQVVH 144
            VGS VK +  GDRV + P +  +C  C HC GG   LC E +      V+G  A  VV 
Sbjct: 94  AVGSGVKHVKEGDRVGI-PWLYTACGHCRHCLGGWETLCEE-QLNTGYSVNGGFAEYVVA 151
Query: 145 PADLCFKLPDNVSLEEGA--MCEPLSVGLHACRRANIGPETNVLIMGAGPIGLVTMLGAP 202
             +    LP N+   E A  +C  ++V     +  +  P   V+I G G +G + +  A 
Sbjct: 152 DPNFVGHLPKNIDFNEIAPVLCAGVTV-YKGLKVTDTKPGDWVVISGIGGLGHMAVQYA- 209
Query: 203 RAFGAPRIVIVDVDDYRLSVAKEIGADNIVKVSTNLQDIAEEVEKIQKAMGTGIDVSFDC 262
           RA G   +  VD+DD +L +A+ +GA     V+ N + +A+    I+K    G       
Sbjct: 210 RAMGL-NVAAVDIDDRKLDLARRLGA----TVTVNAKTVADPAAYIRKETDGGAQGVLVT 264
Query: 263 AGLNKTMSTALGATCAGGKVCLVGM 287
           A   K    ALG    GG V L G+
Sbjct: 265 AVSPKAFEQALGMVARGGTVSLNGL 289

>pdb|3FPC|A Chain A, Chimera Of Alcohol Dehydrogenase By Exchange Of The Cofactor Binding Domain Res 153-294 Of T. Brockii Adh By E. Histolytica Adh Length = 352

Iteration: 1
 Score = 98.6 bits (244), Expect = 6e-21,   Method: Compositional matrix adjust.
 Identities = 101/341 (29%), Positives = 146/341 (42%), Gaps = 50/341 (14%)
Query: 35  ELPSLGPYDVLVRMKAVGICGSDVHYLKTLRCADFVVKEPMVIGHECAGVIEKVGSEVKT 94
           E P+ GP+D +VR  AV  C SD+H   T+       +  M++GHE  G + +VGSEVK 
Sbjct: 18  EKPAPGPFDAIVRPLAVAPCTSDIH---TVFEGAIGERHNMILGHEAVGEVVEVGSEVKD 74
Query: 95  LVPGDRVALEPGISCWRCDHCKGGRYNLCPEM----KFFATPP-VHGSLANQVVHPADLC 149
             PGDRV +      WR    + G +     M    KF      V G   +  V+ AD+ 
Sbjct: 75  FKPGDRVVVPAITPDWRTSEVQRGYHQHSGGMLAGWKFSNVKDGVFGEFFH--VNDADMN 132
Query: 150 F-KLPDNVSLEEGAMC-EPLSVGLHACRRANIGPETNVLIMGAGPIGLVTMLGAPRAFGA 207
              LP  + LE   M  + ++ G H    ANI     V ++G GP+GL+++ GA    GA
Sbjct: 133 LAHLPKEIPLEAAVMIPDMMTTGFHGAELANIKLGDTVCVIGIGPVGLMSVAGA-NHLGA 191
Query: 208 PRIVIVDVDDYRLSVAKEIGADNIVKVSTNLQDIAEEVEKIQKAMGTGIDVSFDCAGLNK 267
            RI  V    +   +A E GA +I+       DI E++ K     G G+D      G   
Sbjct: 192 GRIFAVGSRKHCCDIALEYGATDIINYKNG--DIVEQILKATD--GKGVDKVVIAGGDVH 247
Query: 268 TMSTALGATCAGGKV------------------CLVGMGHHEMTVPLTPAAVREVDVVGV 309
           T + A+     G  +                    VGMGH  +   L P         G 
Sbjct: 248 TFAQAVKMIKPGSDIGNVNYLGEGDNIDIPRSEWGVGMGHKHIHGGLCPG--------GR 299
Query: 310 FRYKNTWPLCLELLRSGKIDVKPLVTHRF-GFSQKEVEEAF 349
            R +      ++L+   ++D   LVTH F GF    +E+AF
Sbjct: 300 LRMER----LIDLVFYKRVDPSKLVTHVFRGFDN--IEKAF 334

>pdb|1R37|A Chain A, Alcohol Dehydrogenase From Sulfolobus Solfataricus Complexed With Nad(H) And 2-Ethoxyethanol Length = 347

Iteration: 1
 Score = 97.4 bits (241), Expect = 1e-20,   Method: Compositional matrix adjust.
 Identities = 94/330 (28%), Positives = 150/330 (45%), Gaps = 16/330 (4%)
Query: 29  LKIQPFELPSLGPYDVLVRMKAVGICGSDVHYLK----TLRCA-DFVVKEPMVIGHECAG 83
           L +Q   +P      VL++++A G+C SDVH  +     LR   D  VK P+ +GHE AG
Sbjct: 13  LSLQEIGVPKPKGPQVLIKVEAAGVCHSDVHMRQGRFGNLRIVEDLGVKLPVTLGHEIAG 72
Query: 84  VIEKVGSEVKTLVPGDRVALEPGISCWRCDHCKGGRYNLCPEMKFFATPPVHGSLANQVV 143
            IE+VG EV     GD VA+ P      C +C+ G  +LC   ++       G+ A  V+
Sbjct: 73  KIEEVGDEVVGYSKGDLVAVNPWQGEGNCYYCRIGEEHLCDSPRWLGI-NFDGAYAEYVI 131
Query: 144 HP-ADLCFKLPDNVSLEEGAMCEPLSVGLHACRRANIGPETNVLIMGAGPIGLVTMLGAP 202
            P     +KL    ++E   +         A R+A++ P   +L++GAG       +   
Sbjct: 132 VPHYKYMYKLRRLNAVEAAPLTCSGITTYRAVRKASLDPTKTLLVVGAGGGLGTMAVQIA 191
Query: 203 RAFGAPRIVIVDVDDYRLSVAKEIGADNIVKVSTNLQDIAEEVEKIQKAMGTGIDVSFDC 262
           +A     I+ VDV +  +  AK  GAD ++  S  +QD   E+ +I ++   G+D   D 
Sbjct: 192 KAVSGATIIGVDVREEAVEAAKRAGADYVINAS--MQDPLAEIRRITES--KGVDAVIDL 247
Query: 263 AGLNKTMSTALGATCAGGKVCLVGMGHHEMTVPLTPAAVREVDVVGVFRYKNTWPL-CLE 321
               KT+S    A    GK  +VG+   ++        + E+  VG      +  L  + 
Sbjct: 248 NNSEKTLSVYPKALAKQGKYVMVGLFGADLHYHAPLITLSEIQFVGSLVGNQSDFLGIMR 307
Query: 322 LLRSGKIDVKPLVTHRFGFSQKEVEEAFET 351
           L  +GK  VKP++T       +E  EA + 
Sbjct: 308 LAEAGK--VKPMITKTMKL--EEANEAIDN 333

>pdb|1LLU|A Chain A, The Ternary Complex Of Pseudomonas Aeruginosa Alcohol Dehydrogenase With Its Coenzyme And Weak Substrate Length = 342

Iteration: 1
 Score = 97.4 bits (241), Expect = 1e-20,   Method: Compositional matrix adjust.
 Identities = 87/286 (30%), Positives = 138/286 (48%), Gaps = 21/286 (7%)
Query: 29  LKIQPFELPSLGPYDVLVRMKAVGICGSDVHYLKTLRCADFVVKEPM--VIGHECAGVIE 86
           L+I+  ++P  GP  VLV+++A G+C +D+H  +     D+ VK P+  + GHE  G + 
Sbjct: 19  LRIEEVKVPLPGPGQVLVKIEASGVCHTDLHAAE----GDWPVKPPLPFIPGHEGVGYVA 74
Query: 87  KVGSEVKTLVPGDRVALEPGI--SCWRCDHCKGGRYNLCPEMKFFATPPVHGSLANQVVH 144
            VGS V  +  GDRV + P +  +C  C+HC  G   LC E +      V+G  A  V+ 
Sbjct: 75  AVGSGVTRVKEGDRVGI-PWLYTACGCCEHCLTGWETLC-ESQQNTGYSVNGGYAEYVLA 132
Query: 145 PADLCFKLPDNVSLEEGA--MCEPLSVGLHACRRANIGPETNVLIMGAGPIGLVTMLGAP 202
             +    LP NV   E A  +C  ++V     ++ N  P   V I G G +G V +  A 
Sbjct: 133 DPNYVGILPKNVEFAEIAPILCAGVTV-YKGLKQTNARPGQWVAISGIGGLGHVAVQYA- 190
Query: 203 RAFGAPRIVIVDVDDYRLSVAKEIGADNIVKVSTNLQDIAEEVEKIQKAMGTGIDVSFDC 262
           RA G   +  +D+DD +L +A+++GA   V          + VE IQ+ +G G       
Sbjct: 191 RAMGL-HVAAIDIDDAKLELARKLGASLTVNARQE-----DPVEAIQRDIG-GAHGVLVT 243
Query: 263 AGLNKTMSTALGATCAGGKVCLVGMGHHEMTVPLTPAAVREVDVVG 308
           A  N     A+G    GG + LVG+   +   P+    ++ + + G
Sbjct: 244 AVSNSAFGQAIGMARRGGTIALVGLPPGDFPTPIFDVVLKGLHIAG 289

>pdb|1NTO|A Chain A, N249y Mutant Of Alcohol Dehydrogenase From The Archaeon Sulfolobus Solfataricus-Monoclinic Crystal Form Length = 347

Iteration: 1
 Score = 96.7 bits (239), Expect = 2e-20,   Method: Compositional matrix adjust.
 Identities = 94/330 (28%), Positives = 150/330 (45%), Gaps = 16/330 (4%)
Query: 29  LKIQPFELPSLGPYDVLVRMKAVGICGSDVHYLK----TLRCA-DFVVKEPMVIGHECAG 83
           L +Q   +P      VL++++A G+C SDVH  +     LR   D  VK P+ +GHE AG
Sbjct: 13  LSLQEIGVPKPKGPQVLIKVEAAGVCHSDVHMRQGRFGNLRIVEDLGVKLPVTLGHEIAG 72
Query: 84  VIEKVGSEVKTLVPGDRVALEPGISCWRCDHCKGGRYNLCPEMKFFATPPVHGSLANQVV 143
            IE+VG EV     GD VA+ P      C +C+ G  +LC   ++       G+ A  V+
Sbjct: 73  KIEEVGDEVVGYSKGDLVAVNPWQGEGNCYYCRIGEEHLCDSPRWLGI-NFDGAYAEYVI 131
Query: 144 HP-ADLCFKLPDNVSLEEGAMCEPLSVGLHACRRANIGPETNVLIMGAGPIGLVTMLGAP 202
            P     +KL    ++E   +         A R+A++ P   +L++GAG       +   
Sbjct: 132 VPHYKYMYKLRRLNAVEAAPLTCSGITTYRAVRKASLDPTKTLLVVGAGGGLGTMAVQIA 191
Query: 203 RAFGAPRIVIVDVDDYRLSVAKEIGADNIVKVSTNLQDIAEEVEKIQKAMGTGIDVSFDC 262
           +A     I+ VDV +  +  AK  GAD ++  S  +QD   E+ +I ++   G+D   D 
Sbjct: 192 KAVSGATIIGVDVREEAVEAAKRAGADYVINAS--MQDPLAEIRRITES--KGVDAVIDL 247
Query: 263 AGLNKTMSTALGATCAGGKVCLVGMGHHEMTVPLTPAAVREVDVVGVFRYKNTWPL-CLE 321
               KT+S    A    GK  +VG+   ++        + E+  VG      +  L  + 
Sbjct: 248 NYSEKTLSVYPKALAKQGKYVMVGLFGADLHYHAPLITLSEIQFVGSLVGNQSDFLGIMR 307
Query: 322 LLRSGKIDVKPLVTHRFGFSQKEVEEAFET 351
           L  +GK  VKP++T       +E  EA + 
Sbjct: 308 LAEAGK--VKPMITKTMKL--EEANEAIDN 333

>pdb|3I4C|A Chain A, Crystal Structure Of Sulfolobus Solfataricus Adh(Ssadh) Double Mutant (W95l,N249y) Length = 347

Iteration: 1
 Score = 95.5 bits (236), Expect = 4e-20,   Method: Compositional matrix adjust.
 Identities = 94/330 (28%), Positives = 150/330 (45%), Gaps = 16/330 (4%)
Query: 29  LKIQPFELPSLGPYDVLVRMKAVGICGSDVHYLK----TLRCA-DFVVKEPMVIGHECAG 83
           L +Q   +P      VL++++A G+C SDVH  +     LR   D  VK P+ +GHE AG
Sbjct: 13  LSLQEIGVPKPKGPQVLIKVEAAGVCHSDVHMRQGRFGNLRIVEDLGVKLPVTLGHEIAG 72
Query: 84  VIEKVGSEVKTLVPGDRVALEPGISCWRCDHCKGGRYNLCPEMKFFATPPVHGSLANQVV 143
            IE+VG EV     GD VA+ P      C +C+ G  +LC   ++       G+ A  V+
Sbjct: 73  KIEEVGDEVVGYSKGDLVAVNPLQGEGNCYYCRIGEEHLCDSPRWLGI-NFDGAYAEYVI 131
Query: 144 HP-ADLCFKLPDNVSLEEGAMCEPLSVGLHACRRANIGPETNVLIMGAGPIGLVTMLGAP 202
            P     +KL    ++E   +         A R+A++ P   +L++GAG       +   
Sbjct: 132 VPHYKYMYKLRRLNAVEAAPLTCSGITTYRAVRKASLDPTKTLLVVGAGGGLGTMAVQIA 191
Query: 203 RAFGAPRIVIVDVDDYRLSVAKEIGADNIVKVSTNLQDIAEEVEKIQKAMGTGIDVSFDC 262
           +A     I+ VDV +  +  AK  GAD ++  S  +QD   E+ +I ++   G+D   D 
Sbjct: 192 KAVSGATIIGVDVREEAVEAAKRAGADYVINAS--MQDPLAEIRRITES--KGVDAVIDL 247
Query: 263 AGLNKTMSTALGATCAGGKVCLVGMGHHEMTVPLTPAAVREVDVVGVFRYKNTWPL-CLE 321
               KT+S    A    GK  +VG+   ++        + E+  VG      +  L  + 
Sbjct: 248 NYSEKTLSVYPKALAKQGKYVMVGLFGADLHYHAPLITLSEIQFVGSLVGNQSDFLGIMR 307
Query: 322 LLRSGKIDVKPLVTHRFGFSQKEVEEAFET 351
           L  +GK  VKP++T       +E  EA + 
Sbjct: 308 LAEAGK--VKPMITKTMKL--EEANEAIDN 333

>pdb|3COS|A Chain A, Crystal Structure Of Human Class Ii Alcohol Dehydrogenase (Adh4) In Complex With Nad And Zn Length = 381

Iteration: 1
 Score = 95.5 bits (236), Expect = 4e-20,   Method: Compositional matrix adjust.
 Identities = 94/370 (25%), Positives = 165/370 (44%), Gaps = 48/370 (12%)
Query: 21  AWLLGVNTLKIQPFELPSLGPYDVLVRMKAVGICGSDVHYLKTLRCADFVVKEPMVIGHE 80
           AW  G   L I+  E+     ++V +++ A  +C +D   + +       +  P+++GHE
Sbjct: 16  AWEAG-KPLCIEEVEVAPPKAHEVRIQIIATSLCHTDATVIDSKFEG---LAFPVIVGHE 71
Query: 81  CAGVIEKVGSEVKTLVPGDRVALEPGISCWRCDHCKGGRYNLCPEMKFFATP-------- 132
            AG++E +G  V  + PGD+V       C +C  C     NLC ++    +P        
Sbjct: 72  AAGIVESIGPGVTNVKPGDKVIPLYAPLCRKCKFCLSPLTNLCGKISNLKSPASDQQLME 131
Query: 133 -----------PVH----GSLANQVVHPADLCF-KLPDNVSLEEGAMCEPLSVGLH---- 172
                      PV+     S  +Q    +D+   K+ D+ +LE   +   L  G      
Sbjct: 132 DKTSRFTCKGKPVYHFFGTSTFSQYTVVSDINLAKIDDDANLERVCL---LGCGFSTGYG 188
Query: 173 -ACRRANIGPETNVLIMGAGPIGLVTMLGAPRAFGAPRIVIVDVDDYRLSVAKEIGADNI 231
            A   A + P +   + G G +GL  ++G  +A GA RI+ +D++  +   AK +GA + 
Sbjct: 189 AAINNAKVTPGSTCAVFGLGGVGLSAVMGC-KAAGASRIIGIDINSEKFVKAKALGATDC 247
Query: 232 VKVSTNLQDIAEEVEKIQKAMGTGIDVSFDCAGLNKTMSTALGATCAGGKVCL---VGMG 288
           +      + I E + ++ K    G+D + DCAG ++TM  AL  T AG   C    V  G
Sbjct: 248 LNPRDLHKPIQEVIIELTKG---GVDFALDCAGGSETMKAALDCTTAGWGSCTFIGVAAG 304
Query: 289 HHEMTV-PLTPAAVREVD--VVGVFRYKNTWPLCLELLRSGKIDVKPLVTHRFGFSQKEV 345
              +TV P      R ++    G ++  ++ P  +   ++ K ++  LVTH   F +  +
Sbjct: 305 SKGLTVFPEELIIGRTINGTFFGGWKSVDSIPKLVTDYKNKKFNLDALVTHTLPFDK--I 362
Query: 346 EEAFETSARG 355
            EAF+   +G
Sbjct: 363 SEAFDLMNQG 372

>pdb|1PED|A Chain A, Bacterial Secondary Alcohol Dehydrogenase (Apo-Form) Length = 351

Iteration: 1
 Score = 94.7 bits (234), Expect = 7e-20,   Method: Compositional matrix adjust.
 Identities = 100/353 (28%), Positives = 156/353 (44%), Gaps = 50/353 (14%)
Query: 23  LLGVNTLKIQPFELPSLGPYDVLVRMKAVGICGSDVHYLKTLRCADFVVKEPMVIGHECA 82
           +LG+N L     E P  G YD +VR  AV  C SD+H +      D   ++ M++GHE  
Sbjct: 6   MLGINKLGWIEKERPVAGSYDAIVRPLAVSPCTSDIHTVFEGALGD---RKNMILGHEAV 62
Query: 83  GVIEKVGSEVKTLVPGDRVALEPGISCWRCDHCKGGRYNLCPEM----KFFATPP-VHGS 137
           G + +VGSEVK   PGDRV +      WR    + G       M    KF      V G 
Sbjct: 63  GEVVEVGSEVKDFKPGDRVIVPCTTPDWRSLEVQAGFQQHSNGMLAGWKFSNFKDGVFGE 122
Query: 138 LANQVVHPADLCFK-LPDNVSLEEGAM-CEPLSVGLHACRRANIGPETNVLIMGAGPIGL 195
             +  V+ AD+    LP ++ LE   M  + ++ G H    A+I   ++V+++G G +GL
Sbjct: 123 YFH--VNDADMNLAILPKDMPLENAVMITDMMTTGFHGAELADIQMGSSVVVIGIGAVGL 180
Query: 196 VTMLGAPRAFGAPRIVIVDVDDYRLSVAKEIGADNIVKVSTNLQDIAEEVEKIQKAMGTG 255
           + + GA +  GA RI+ V      +  AK  GA +I+        I ++V K+    G G
Sbjct: 181 MGIAGA-KLRGAGRIIGVGSRPICVEAAKFYGATDILNYKNG--HIVDQVMKLTN--GKG 235
Query: 256 IDVSFDCAGLNKTMSTALGATCAGGKVCLV------------------GMGHHEMTVPLT 297
           +D      G ++T+S A+     GG +  +                  GM H  +   L 
Sbjct: 236 VDRVIMAGGGSETLSQAVSMVKPGGIISNINYHGSGDALLIPRVEWGCGMAHKTIKGGLC 295
Query: 298 PAAVREVDVVGVFRYKNTWPLCLELLRSGKIDVKPLVTHRF-GFSQKEVEEAF 349
           P         G  R +    +  +++   ++D+  LVTH + GF    +EEA 
Sbjct: 296 PG--------GRLRAE----MLRDMVVYNRVDLSKLVTHVYHGFDH--IEEAL 334

>pdb|3FSR|A Chain A, Chimera Of Alcohol Dehydrogenase By Exchange Of The Cofactor Binding Domain Res 153-295 Of T. Brockii Adh By C. Beijerinckii Adh Length = 352

Iteration: 1
 Score = 94.4 bits (233), Expect = 9e-20,   Method: Compositional matrix adjust.
 Identities = 98/341 (28%), Positives = 151/341 (44%), Gaps = 50/341 (14%)
Query: 35  ELPSLGPYDVLVRMKAVGICGSDVHYLKTLRCADFVVKEPMVIGHECAGVIEKVGSEVKT 94
           E P+ GP+D +VR  AV  C SD+H   T+       +  M++GHE  G + +VGSEVK 
Sbjct: 18  EKPAPGPFDAIVRPLAVAPCTSDIH---TVFEGAIGERHNMILGHEAVGEVVEVGSEVKD 74
Query: 95  LVPGDRVALEPGISCWRCDHCKGGRYNLCPEM----KFFATPP-VHGSLANQVVHPADLC 149
             PGDRV +      WR    + G +     M    KF      V G   +  V+ AD+ 
Sbjct: 75  FKPGDRVVVPAITPDWRTSEVQRGYHQHSGGMLAGWKFSNVKDGVFGEFFH--VNDADMN 132
Query: 150 F-KLPDNVSLEEGAMC-EPLSVGLHACRRANIGPETNVLIMGAGPIGLVTMLGAPRAFGA 207
              LP  + LE   M  + ++ G H    A+I   ++V+++G G +GL+ + GA +  GA
Sbjct: 133 LAHLPKEIPLEAAVMIPDMMTTGFHGAELADIQMGSSVVVIGIGAVGLMGIAGA-KLRGA 191
Query: 208 PRIVIVDVDDYRLSVAKEIGADNIVKVSTNLQDIAEEVEKIQKAMGTGIDVSFDCAGLNK 267
            RI+ V      +  AK  GA +I+        I ++V K+    G G+D      G ++
Sbjct: 192 GRIIGVGSRPICVEAAKFYGATDILNYKNG--HIVDQVMKLTN--GKGVDRVIMAGGGSE 247
Query: 268 TMSTALGATCAGGKVCLV------------------GMGHHEMTVPLTPAAVREVDVVGV 309
           T+S A+     GG +  +                  GM H  +   L P         G 
Sbjct: 248 TLSQAVSMVKPGGIISNINYHGSGDALLIPRVEWGCGMAHKTIKGGLCPG--------GR 299
Query: 310 FRYKNTWPLCLELLRSGKIDVKPLVTHRF-GFSQKEVEEAF 349
            R +      ++L+   ++D   LVTH F GF    +E+AF
Sbjct: 300 LRMER----LIDLVFYKRVDPSKLVTHVFRGFDN--IEKAF 334

>pdb|2B83|A Chain A, A Single Amino Acid Substitution In The Clostridium Beijerinckii Alcohol Dehydrogenase Is Critical For Thermostabilization Length = 351

Iteration: 1
 Score = 94.4 bits (233), Expect = 9e-20,   Method: Compositional matrix adjust.
 Identities = 99/353 (28%), Positives = 156/353 (44%), Gaps = 50/353 (14%)
Query: 23  LLGVNTLKIQPFELPSLGPYDVLVRMKAVGICGSDVHYLKTLRCADFVVKEPMVIGHECA 82
           +LG+N L     E P  G YD +VR  AV  C SD+H +      D   ++ M++GHE  
Sbjct: 6   MLGINKLGWIEKERPVAGSYDAIVRPLAVSPCTSDIHTVFEGALGD---RKNMILGHEAV 62
Query: 83  GVIEKVGSEVKTLVPGDRVALEPGISCWRCDHCKGG----RYNLCPEMKFFATPP-VHGS 137
           G + +VGSEVK   PGDRV +      WR    + G       +    KF      V G 
Sbjct: 63  GEVVEVGSEVKDFKPGDRVIVPCTTPDWRSLEVQAGFPQHSNGMLAGWKFSNFKDGVFGE 122
Query: 138 LANQVVHPADLCFK-LPDNVSLEEGAM-CEPLSVGLHACRRANIGPETNVLIMGAGPIGL 195
             +  V+ AD+    LP ++ LE   M  + ++ G H    A+I   ++V+++G G +GL
Sbjct: 123 YFH--VNDADMNLAILPKDMPLENAVMITDMMTTGFHGAELADIQMGSSVVVIGIGAVGL 180
Query: 196 VTMLGAPRAFGAPRIVIVDVDDYRLSVAKEIGADNIVKVSTNLQDIAEEVEKIQKAMGTG 255
           + + GA +  GA RI+ V      +  AK  GA +I+        I ++V K+    G G
Sbjct: 181 MGIAGA-KLRGAGRIIGVGSRPICVEAAKFYGATDILNYKNG--HIVDQVMKLTN--GKG 235
Query: 256 IDVSFDCAGLNKTMSTALGATCAGGKVCLV------------------GMGHHEMTVPLT 297
           +D      G ++T+S A+     GG +  +                  GM H  +   L 
Sbjct: 236 VDRVIMAGGGSETLSQAVSMVKPGGIISNINYHGSGDALLIPRVEWGCGMAHKTIKGGLC 295
Query: 298 PAAVREVDVVGVFRYKNTWPLCLELLRSGKIDVKPLVTHRF-GFSQKEVEEAF 349
           P         G  R +    +  +++   ++D+  LVTH + GF    +EEA 
Sbjct: 296 PG--------GRLRAE----MLRDMVVYNRVDLSKLVTHVYHGFDH--IEEAL 334

>pdb|1Y9A|A Chain A, Alcohol Dehydrogenase From Entamoeba Histolotica In Complex With Cacodylate Length = 360

Iteration: 1
 Score = 94.4 bits (233), Expect = 1e-19,   Method: Compositional matrix adjust.
 Identities = 97/351 (27%), Positives = 149/351 (42%), Gaps = 46/351 (13%)
Query: 23  LLGVNTLKIQPFELPSLGPYDVLVRMKAVGICGSDVHYLKTLRCADFVVKEPMVIGHECA 82
           +LG+  +     ++P  GP D LVR  A+  C SD H +      D   +  M++GHE  
Sbjct: 6   MLGIGRIGWIEKKIPECGPLDALVRPLALAPCTSDTHTVWAGAIGD---RHDMILGHEAV 62
Query: 83  GVIEKVGSEVKTLVPGDRVALEPGISCWRCDHCKGGR-YNLCPEMKFFATPPVHGSLANQ 141
           G I KVGS VK L  GD+V +      W  +  + G   +    +  +        + ++
Sbjct: 63  GQIVKVGSLVKRLKVGDKVIVPAITPDWGEEESQRGYPMHSGGMLGGWKFSNFKDGVFSE 122
Query: 142 VVH----PADLCFKLPDNVSLEEGAMCEPL-SVGLHACRRANIGPETNVLIMGAGPIGLV 196
           V H     A+L   LP ++  E+  M   + + G H    ANI     V ++G GP+GL+
Sbjct: 123 VFHVNEADANLAL-LPRDIKPEDAVMLSDMVTTGFHGAELANIKLGDTVCVIGIGPVGLM 181
Query: 197 TMLGAPRAFGAPRIVIVDVDDYRLSVAKEIGADNIVKVSTNLQDIAEEVEKIQKAMGTGI 256
           ++ GA    GA RI  V    +   +A E GA +I+       DI E++  ++   G G+
Sbjct: 182 SVAGA-NHLGAGRIFAVGSRKHCCDIALEYGATDIINYKNG--DIVEQI--LKATDGKGV 236
Query: 257 DVSFDCAGLNKTMSTALGATCAGGKV------------------CLVGMGHHEMTVPLTP 298
           D      G   T + A+     G  +                    VGMGH  +   LTP
Sbjct: 237 DKVVIAGGXVHTFAQAVKMIKPGSDIGNVNYLGEGDNIDIPRSEWGVGMGHKHIHGGLTP 296
Query: 299 AAVREVDVVGVFRYKNTWPLCLELLRSGKIDVKPLVTHRFGFSQKEVEEAF 349
                    G  R +        L+ +GK+D   L+THRF   +K VE+A 
Sbjct: 297 G--------GRVRMEK----LASLISTGKLDTSKLITHRFEGLEK-VEDAL 334

>pdb|3FTN|A Chain A, Q165eS254K DOUBLE MUTANT CHIMERA OF ALCOHOL DEHYDROGENASE BY EXCHANGE Of The Cofactor Binding Domain Res 153-295 Of T. Brockii Adh By C. Beijerinckii Adh Length = 352

Iteration: 1
 Score = 93.6 bits (231), Expect = 1e-19,   Method: Compositional matrix adjust.
 Identities = 98/341 (28%), Positives = 151/341 (44%), Gaps = 50/341 (14%)
Query: 35  ELPSLGPYDVLVRMKAVGICGSDVHYLKTLRCADFVVKEPMVIGHECAGVIEKVGSEVKT 94
           E P+ GP+D +VR  AV  C SD+H   T+       +  M++GHE  G + +VGSEVK 
Sbjct: 18  EKPAPGPFDAIVRPLAVAPCTSDIH---TVFEGAIGERHNMILGHEAVGEVVEVGSEVKD 74
Query: 95  LVPGDRVALEPGISCWRCDHCKGGRYNLCPEM----KFFATPP-VHGSLANQVVHPADLC 149
             PGDRV +      WR    + G +     M    KF      V G   +  V+ AD+ 
Sbjct: 75  FKPGDRVVVPAITPDWRTSEVQRGYHQHSGGMLAGWKFSNVKDGVFGEFFH--VNDADMN 132
Query: 150 F-KLPDNVSLEEGAMC-EPLSVGLHACRRANIGPETNVLIMGAGPIGLVTMLGAPRAFGA 207
              LP  + LE   M  + ++ G H    A+I   ++V+++G G +GL+ + GA +  GA
Sbjct: 133 LAHLPKEIPLEAAVMIPDMMTTGFHGAELADIEMGSSVVVIGIGAVGLMGIAGA-KLRGA 191
Query: 208 PRIVIVDVDDYRLSVAKEIGADNIVKVSTNLQDIAEEVEKIQKAMGTGIDVSFDCAGLNK 267
            RI+ V      +  AK  GA +I+        I ++V K+    G G+D      G ++
Sbjct: 192 GRIIGVGSRPICVEAAKFYGATDILNYKNG--HIVDQVMKLTN--GKGVDRVIMAGGGSE 247
Query: 268 TMSTALGATCAGGKVCLV------------------GMGHHEMTVPLTPAAVREVDVVGV 309
           T+S A+     GG +  +                  GM H  +   L P         G 
Sbjct: 248 TLSQAVKMVKPGGIISNINYHGSGDALLIPRVEWGCGMAHKTIKGGLCPG--------GR 299
Query: 310 FRYKNTWPLCLELLRSGKIDVKPLVTHRF-GFSQKEVEEAF 349
            R +      ++L+   ++D   LVTH F GF    +E+AF
Sbjct: 300 LRMER----LIDLVFYKRVDPSKLVTHVFRGFDN--IEKAF 334

>pdb|2OUI|A Chain A, D275p Mutant Of Alcohol Dehydrogenase From Protozoa Entamoeba Histolytica Length = 360

Iteration: 1
 Score = 93.2 bits (230), Expect = 2e-19,   Method: Compositional matrix adjust.
 Identities = 98/351 (27%), Positives = 148/351 (42%), Gaps = 46/351 (13%)
Query: 23  LLGVNTLKIQPFELPSLGPYDVLVRMKAVGICGSDVHYLKTLRCADFVVKEPMVIGHECA 82
           +LG+  +     ++P  GP D LVR  A+  C SD H +      D   +  M++GHE  
Sbjct: 6   MLGIGRIGWIEKKIPECGPLDALVRPLALAPCTSDTHTVWAGAIGD---RHDMILGHEAV 62
Query: 83  GVIEKVGSEVKTLVPGDRVALEPGISCWRCDHCKGGR-YNLCPEMKFFATPPVHGSLANQ 141
           G I KVGS VK L  GD+V +      W  +  + G   +    +  +        + ++
Sbjct: 63  GQIVKVGSLVKRLKVGDKVIVPAITPDWGEEESQRGYPMHSGGMLGGWKFSNFKDGVFSE 122
Query: 142 VVH----PADLCFKLPDNVSLEEGAMCEPL-SVGLHACRRANIGPETNVLIMGAGPIGLV 196
           V H     A+L   LP ++  E+  M   + + G H    ANI     V ++G GP+GL+
Sbjct: 123 VFHVNEADANLAL-LPRDIKPEDAVMLSDMVTTGFHGAELANIKLGDTVCVIGIGPVGLM 181
Query: 197 TMLGAPRAFGAPRIVIVDVDDYRLSVAKEIGADNIVKVSTNLQDIAEEVEKIQKAMGTGI 256
           ++ GA    GA RI  V    +   +A E GA +I+       DI E++ K     G G+
Sbjct: 182 SVAGA-NHLGAGRIFAVGSRKHCCDIALEYGATDIINYKNG--DIVEQILKATD--GKGV 236
Query: 257 DVSFDCAGLNKTMSTALGATCAGGKV------------------CLVGMGHHEMTVPLTP 298
           D      G   T + A+     G  +                    VGMGH  +   LTP
Sbjct: 237 DKVVIAGGDVHTFAQAVKMIKPGSDIGNVNYLGEGDNIPIPRSEWGVGMGHKHIHGGLTP 296
Query: 299 AAVREVDVVGVFRYKNTWPLCLELLRSGKIDVKPLVTHRFGFSQKEVEEAF 349
                    G  R +        L+ +GK+D   L+THRF   +K VE+A 
Sbjct: 297 G--------GRVRMEK----LASLISTGKLDTSKLITHRFEGLEK-VEDAL 334

>pdb|1JQB|A Chain A, Alcohol Dehydrogenase From Clostridium Beijerinckii: Crystal Structure Of Mutant With Enhanced Thermal Stability Length = 351

Iteration: 1
 Score = 92.8 bits (229), Expect = 3e-19,   Method: Compositional matrix adjust.
 Identities = 100/353 (28%), Positives = 155/353 (43%), Gaps = 50/353 (14%)
Query: 23  LLGVNTLKIQPFELPSLGPYDVLVRMKAVGICGSDVHYLKTLRCADFVVKEPMVIGHECA 82
           +LG+N L     E P  G YD +VR  AV  C SD+H +      D   ++ M++GHE  
Sbjct: 6   MLGINKLGWIEKERPVAGSYDAIVRPLAVSPCTSDIHTVFEGALGD---RKNMILGHEAV 62
Query: 83  GVIEKVGSEVKTLVPGDRVALEPGISCWRCDHCKGGRYNLCPEM----KFFATPP-VHGS 137
           G + +VGSEVK   PGDRV +      WR    + G       M    KF      V G 
Sbjct: 63  GEVVEVGSEVKDFKPGDRVIVPCTTPDWRSLEVQAGFQQHSNGMLAGWKFSNFKDGVFGE 122
Query: 138 LANQVVHPADLCFK-LPDNVSLEEGAM-CEPLSVGLHACRRANIGPETNVLIMGAGPIGL 195
             +  V+ AD+    LP ++ LE   M  + ++ G H    A+I   ++V+++G G +GL
Sbjct: 123 YFH--VNDADMNLAILPKDMPLENAVMITDMMTTGFHGAELADIEMGSSVVVIGIGAVGL 180
Query: 196 VTMLGAPRAFGAPRIVIVDVDDYRLSVAKEIGADNIVKVSTNLQDIAEEVEKIQKAMGTG 255
           + + GA +  GA RI+ V      +  AK  GA +I+        I ++V K+    G G
Sbjct: 181 MGIAGA-KLRGAGRIIGVGSRPICVEAAKFYGATDILNYKNG--HIEDQVMKLTN--GKG 235
Query: 256 IDVSFDCAGLNKTMSTALGATCAGGKVCLV------------------GMGHHEMTVPLT 297
           +D      G ++T+S A+     GG +  +                  GM H  +   L 
Sbjct: 236 VDRVIMAGGGSETLSQAVKMVKPGGIISNINYHGSGDALLIPRVEWGCGMAHKTIKGGLC 295
Query: 298 PAAVREVDVVGVFRYKNTWPLCLELLRSGKIDVKPLVTHRF-GFSQKEVEEAF 349
           P         G  R +       +++   ++D+  LVTH + GF    +EEA 
Sbjct: 296 PG--------GRLRAER----LRDMVVYNRVDLSKLVTHVYHGFDH--IEEAL 334

>pdb|1JVB|A Chain A, Alcohol Dehydrogenase From The Archaeon Sulfolobus Solfataricus Length = 347

Iteration: 1
 Score = 92.8 bits (229), Expect = 3e-19,   Method: Compositional matrix adjust.
 Identities = 95/330 (28%), Positives = 149/330 (45%), Gaps = 19/330 (5%)
Query: 29  LKIQPFELPSLGPYDVLVRMKAVGICGSDVHYLK----TLRCA-DFVVKEPMVIGHECAG 83
           L +Q   +P      VL++++A G+C SDVH  +     LR   D  VK P+ +GHE AG
Sbjct: 13  LSLQEIGVPKPKGPQVLIKVEAAGVCHSDVHXRQGRFGNLRIVEDLGVKLPVTLGHEIAG 72
Query: 84  VIEKVGSEVKTLVPGDRVALEPGISCWRCDHCKGGRYNLCPEMKFFATPPVHGSLANQVV 143
            IE+VG EV     GD VA+ P      C +C+ G  +LC   ++       G+ A  V+
Sbjct: 73  KIEEVGDEVVGYSKGDLVAVNPWQGEGNCYYCRIGEEHLCDSPRWLGI-NFDGAYAEYVI 131
Query: 144 HP-ADLCFKLPDNVSLEEGAMCEPLSVGLHACRRANIGPETNVLIMGAGPIGLVTMLGAP 202
            P     +KL    ++E   +         A R+A++ P   +L++GAG       +   
Sbjct: 132 VPHYKYXYKLRRLNAVEAAPLTCSGITTYRAVRKASLDPTKTLLVVGAGGGLGTXAVQIA 191
Query: 203 RAFGAPRIVIVDVDDYRLSVAKEIGADNIVKVSTNLQDIAEEVEKIQKAMGTGIDVSFDC 262
           +A     I+ VDV +  +  AK  GAD ++  S  +QD   E+ +I ++   G+D   D 
Sbjct: 192 KAVSGATIIGVDVREEAVEAAKRAGADYVINAS--MQDPLAEIRRITES--KGVDAVIDL 247
Query: 263 AGLNKTMSTALGATCAGGKVCLVGMGHHEMTVPLTPAAVREVDVVGVFRYKNTWPLCL-E 321
               KT+S    A    GK   VG+   ++        + E+  VG      +  L +  
Sbjct: 248 NNSEKTLSVYPKALAKQGKYVXVGLFGADLHYHAPLITLSEIQFVGSLVGNQSDFLGIXR 307
Query: 322 LLRSGKIDVKPLVTHRFGFSQKEVEEAFET 351
           L  +GK  VKP +T        ++EEA E 
Sbjct: 308 LAEAGK--VKPXIT-----KTXKLEEANEA 330

>pdb|1H2B|A Chain A, Crystal Structure Of The Alcohol Dehydrogenase From The Hyperthermophilic Archaeon Aeropyrum Pernix At 1.65a Resolution Length = 359

Iteration: 1
 Score = 92.4 bits (228), Expect = 4e-19,   Method: Compositional matrix adjust.
 Identities = 71/267 (26%), Positives = 128/267 (47%), Gaps = 14/267 (5%)
Query: 29  LKIQPFELPSL-GPYDVLVRMKAVGICGSDVHYLKTLRCADFVVKEPMVIGHECAGVIEK 87
           L+I+  + P L G +DV+VR+   G+C +D+H ++ +       K P  +GHE  G IE+
Sbjct: 28  LRIEDVDYPRLEGRFDVIVRIAGAGVCHTDLHLVQGMWHELLQPKLPYTLGHENVGYIEE 87
Query: 88  VGSEVKTLVPGDRVALEPGISCWRCDHCKGGRYNLCPEMKFFATPPVHGSLANQVVHPAD 147
           V   V+ L  GD V L P ++   C  C+ G    C  ++F     + G  A  +     
Sbjct: 88  VAEGVEGLEKGDPVILHPAVTDGTCLACRAGEDMHCENLEFPGL-NIDGGFAEFMRTSHR 146
Query: 148 LCFKLPDNVSLEEGAMCEPLS----VGLHACRRA--NIGPETNVLIMGAGPIGLVTMLGA 201
              KLP ++S E+     PL+        A ++A   + P   V I+G G +G +  +  
Sbjct: 147 SVIKLPKDISREKLVEMAPLADAGITAYRAVKKAARTLYPGAYVAIVGVGGLGHIA-VQL 205
Query: 202 PRAFGAPRIVIVDVDDYRLSVAKEIGADNIVKVSTNLQDIAEEVEKIQKAMGTGIDVSFD 261
            +      ++ +DV + +L +A+ +GAD++V      +D  ++V ++ +  G G++V+ D
Sbjct: 206 LKVMTPATVIALDVKEEKLKLAERLGADHVVDAR---RDPVKQVMELTR--GRGVNVAMD 260
Query: 262 CAGLNKTMSTALGATCAGGKVCLVGMG 288
             G   T+          G++ +VG G
Sbjct: 261 FVGSQATVDYTPYLLGRMGRLIIVGYG 287

>pdb|3S1L|A Chain A, Crystal Structure Of Apo-Form Furx Length = 340

Iteration: 1
 Score = 90.5 bits (223), Expect = 1e-18,   Method: Compositional matrix adjust.
 Identities = 87/285 (30%), Positives = 133/285 (46%), Gaps = 19/285 (6%)
Query: 29  LKIQPFELPSLGPYDVLVRMKAVGICGSDVHYLKTLRCADFVVKE--PMVIGHECAGVIE 86
           L I    +P  GP  V V+++A G+C +D+H        D+ VK   P + GHE  G + 
Sbjct: 15  LTIDEVPVPQPGPGQVQVKIEASGVCHTDLHAAD----GDWPVKPTLPFIPGHEGVGYVS 70
Query: 87  KVGSEVKTLVPGDRVALEPGIS-CWRCDHCKGGRYNLCPEMKFFATPPVHGSLANQVVHP 145
            VGS V  +  GDRV +    S C  C+HC  G   LC E +      V+G     VV  
Sbjct: 71  AVGSGVSRVKEGDRVGVPWLYSACGYCEHCLQGWETLC-EKQQNTGYSVNGGYGEYVVAD 129
Query: 146 ADLCFKLPDNVSLEEGA--MCEPLSVGLHACRRANIGPETNVLIMGAGPIGLVTMLGAPR 203
            +    LPD V   E A  +C  ++V     +  +  P   V+I G G +G V +  A R
Sbjct: 130 PNYVGLLPDKVGFVEIAPILCAGVTV-YKGLKVTDTRPGQWVVISGIGGLGHVAVQYA-R 187
Query: 204 AFGAPRIVIVDVDDYRLSVAKEIGADNIVKVSTNLQDIAEEVEKIQKAMGTGIDVSFDCA 263
           A G  R+  VD+DD +L++A+ +GA+    V+ N +D  +    +QK +G G       A
Sbjct: 188 AMGL-RVAAVDIDDAKLNLARRLGAE----VAVNARD-TDPAAWLQKEIG-GAHGVLVTA 240
Query: 264 GLNKTMSTALGATCAGGKVCLVGMGHHEMTVPLTPAAVREVDVVG 308
              K  S A+G    GG + L G+   +   P+    ++ + + G
Sbjct: 241 VSPKAFSQAIGMVRRGGTIALNGLPPGDFGTPIFDVVLKGITIRG 285

>pdb|1VJ0|A Chain A, Crystal Structure Of Alcohol Dehydrogenase (Tm0436) From Thermotoga Maritima At 2.00 A Resolution Length = 380

Iteration: 1
 Score = 89.4 bits (220), Expect = 3e-18,   Method: Compositional matrix adjust.
 Identities = 88/311 (28%), Positives = 143/311 (45%), Gaps = 38/311 (12%)
Query: 29  LKIQPFELPSLGPYDVLVRMKAVGICGSDVHYLKTLRCADFVVKEPMVIGHECAGVIEKV 88
           L  + FE+  +    +LV + + G+CGSDVH     R  D  V  P+++GHE AG + +V
Sbjct: 30  LVYKEFEISDIPRGSILVEILSAGVCGSDVH---MFRGEDPRVPLPIILGHEGAGRVVEV 86
Query: 89  GSEVKT-----LVPGDRVALEPGISCWRCDHCKGGRY-NLCPEMKFFAT-------PPVH 135
             E +      L PGD +    GI+C  C  CK  +   LCP  K +         P + 
Sbjct: 87  NGEKRDLNGELLKPGDLIVWNRGITCGECYWCKVSKEPYLCPNRKVYGINRGCSEYPHLR 146
Query: 136 GSLANQVV-HPADLCFKLPDNVSLEEGAMCEPLSVGLHACRRANIGPET----NVLIMGA 190
           G  ++ +V  P     K+ +   L+  AM   +  G  A    +  PE+     V+I GA
Sbjct: 147 GCYSSHIVLDPETDVLKVSEKDDLDVLAMA--MCSGATAYHAFDEYPESFAGKTVVIQGA 204
Query: 191 GPIGLVTMLGAPRAFGAPRIVIVDVDDYRLSVAKEIGADNIVKVSTNLQDIAEEVEKIQK 250
           GP+GL  ++ A R+ GA  ++++     RL +A+EIGAD    ++ N ++ +  VE+ +K
Sbjct: 205 GPLGLFGVVIA-RSLGAENVIVIAGSPNRLKLAEEIGAD----LTLNRRETS--VEERRK 257
Query: 251 AM-----GTGIDVSFDCAGLNKTMSTALGATCAGGKVCLVGMGHHEMTVPLTPAAVREVD 305
           A+     G G D   +  G ++ +         GG   + G+   +  VP     V E  
Sbjct: 258 AIMDITHGRGADFILEATGDSRALLEGSELLRRGGFYSVAGVAVPQDPVPFK---VYEWL 314
Query: 306 VVGVFRYKNTW 316
           V+    +K  W
Sbjct: 315 VLKNATFKGIW 325

>pdb|3IP1|A Chain A, Structure Of Putative Alcohol Dehydrogenase (Tm_042) From Thermotoga Maritima Length = 404

Iteration: 1
 Score = 84.7 bits (208), Expect = 7e-17,   Method: Compositional matrix adjust.
 Identities = 65/211 (30%), Positives = 103/211 (48%), Gaps = 21/211 (9%)
Query: 41  PYDVLVRMKAVGICGSDVHYLKTLRCADFVVKE----PMVIGHECAGVIEKVGSEV---- 92
           P ++++++KA GICGSDVH  +T      +       P+ +GHE +GV+ + G E     
Sbjct: 55  PTEIIIKVKACGICGSDVHXAQTDEEGYILYPGLTGFPVTLGHEFSGVVVEAGPEAINRR 114
Query: 93  --KTLVPGDRVALEPGISCWRCDHCKGGRYNLCPEMKFFATPPVHGSLANQVVHPADLCF 150
             K    G+ V  E  + C  C  C  G  N C  +       V G+ A  V   A   +
Sbjct: 115 TNKRFEIGEPVCAEEXLWCGHCRPCAEGFPNHCENLNELGF-NVDGAFAEYVKVDAKYAW 173
Query: 151 KLPDNVSLEE-------GAMCEPLSVGLHA--CRRANIGPETNVLIMGAGPIGLVTMLGA 201
            L +   + E       G++ EP SV  +A   R   I P  NV+I+G GPIGL  +   
Sbjct: 174 SLRELEGVYEGDRLFLAGSLVEPTSVAYNAVIVRGGGIRPGDNVVILGGGPIGLAAVAIL 233
Query: 202 PRAFGAPRIVIVDVDDYRLSVAKEIGADNIV 232
             A GA ++++ +  + R ++AKE+GAD+++
Sbjct: 234 KHA-GASKVILSEPSEVRRNLAKELGADHVI 263

>pdb|1F8F|A Chain A, Crystal Structure Of Benzyl Alcohol Dehydrogenase From Acinetobacter Calcoaceticus Length = 371

Iteration: 1
 Score = 84.3 bits (207), Expect = 9e-17,   Method: Compositional matrix adjust.
 Identities = 74/275 (26%), Positives = 122/275 (44%), Gaps = 49/275 (17%)
Query: 43  DVLVRMKAVGICGSDVHYLKTLRCADFVVKEPMVIGHECAGVIEKVGSEVKTLVPGDRVA 102
           +VLV++ A G+C +D+     +R   + V  P V+GHE +G+IE +G  V  L  GD V 
Sbjct: 33  EVLVKVVATGMCHTDL----IVRDQKYPVPLPAVLGHEGSGIIEAIGPNVTELQVGDHVV 88
Query: 103 LEPGISCWRCDHCKGGRYNLCPEM--------------------------KFFATPPVHG 136
           L  G  C +C  C  G    C E                            FFA      
Sbjct: 89  LSYGY-CGKCTQCNTGNPAYCSEFFGRNFSGADSEGNHALCTHDQGVVNDHFFA----QS 143
Query: 137 SLANQVVHPADLCFKLPDNVSLEEGAMCEPLSVGLH----ACRRA-NIGPETNVLIMGAG 191
           S A   +   +   K+  +V +E   +  PL  G+     AC  A  + P ++ +  GAG
Sbjct: 144 SFATYALSRENNTVKVTKDVPIE---LLGPLGCGIQTGAGACINALKVTPASSFVTWGAG 200
Query: 192 PIGLVTMLGAPRAFGAPRIVIVDVDDYRLSVAKEIGADNIVKVSTNLQDIAEEVEKIQKA 251
            +GL  +L A +  GA  I+ VD+ + RL +AK++GA +++   T      + V  I++ 
Sbjct: 201 AVGLSALLAA-KVCGASIIIAVDIVESRLELAKQLGATHVINSKTQ-----DPVAAIKEI 254
Query: 252 MGTGIDVSFDCAGLNKTMSTALGATCAGGKVCLVG 286
              G++ + +  G  + +   + A    GK+ +VG
Sbjct: 255 TDGGVNFALESTGSPEILKQGVDALGILGKIAVVG 289

>pdb|3UKO|A Chain A, Crystal Structure Of S-Nitrosoglutathione Reductase From Arabidopsis Thaliana, Complex With Nadh Length = 378

Iteration: 1
 Score = 84.0 bits (206), Expect = 1e-16,   Method: Compositional matrix adjust.
 Identities = 88/341 (25%), Positives = 140/341 (41%), Gaps = 46/341 (13%)
Query: 43  DVLVRMKAVGICGSDVHYLKTLRCADFVVKEPMVIGHECAGVIEKVGSEVKTLVPGDRVA 102
           +V +++    +C +D +   T    D     P ++GHE AG++E VG  V  +  GD V 
Sbjct: 35  EVRIKILYTALCHTDAY---TWSGKDPEGLFPCILGHEAAGIVESVGEGVTEVQAGDHVI 91
Query: 103 LEPGISCWRCDHCKGGRYNLCPEMKF--------------FAT--PPVHGSLANQVVHPA 146
                 C  C  CK G+ NLC +++               F+    P++  +        
Sbjct: 92  PCYQAECRECKFCKSGKTNLCGKVRSATGVGIMMNDRKSRFSVNGKPIYHFMGTSTFSQ- 150
Query: 147 DLCFKLPDNVSLEEGAMCEPLS-VGLHAC----------RRANIGPETNVLIMGAGPIGL 195
              + +  +VS+ +     PL  V L  C            A + P +NV I G G +GL
Sbjct: 151 ---YTVVHDVSVAKIDPTAPLDKVCLLGCGVPTGLGAVWNTAKVEPGSNVAIFGLGTVGL 207
Query: 196 VTMLGAPRAFGAPRIVIVDVDDYRLSVAKEIGADNIVKVSTNLQDIAEEVEKIQKAMGTG 255
               GA  A GA RI+ +D+D  +   AK+ G +  V    + + I E +  +      G
Sbjct: 208 AVAEGAKTA-GASRIIGIDIDSKKYETAKKFGVNEFVNPKDHDKPIQEVIVDLTDG---G 263
Query: 256 IDVSFDCAGLNKTMSTALGATCAG-GKVCLVGM---GHHEMTVP--LTPAAVREVDVVGV 309
           +D SF+C G    M  AL     G G   +VG+   G    T P  L    V +    G 
Sbjct: 264 VDYSFECIGNVSVMRAALECCHKGWGTSVIVGVAASGQEISTRPFQLVTGRVWKGTAFGG 323
Query: 310 FRYKNTWPLCLELLRSGKIDVKPLVTHRFGFSQKEVEEAFE 350
           F+ +   P  +E   + +I V   +TH       E+ +AF+
Sbjct: 324 FKSRTQVPWLVEKYMNKEIKVDEYITHNLTLG--EINKAFD 362

>pdb|1MC5|A Chain A, Ternary Complex Of Human Glutathione-Dependent Formaldehyde Dehydrogenase With S-(Hydroxymethyl)glutathione And Nadh Length = 374

Iteration: 1
 Score = 84.0 bits (206), Expect = 1e-16,   Method: Compositional matrix adjust.
 Identities = 93/368 (25%), Positives = 144/368 (39%), Gaps = 48/368 (13%)
Query: 21  AWLLGVNTLKIQPFELPSLGPYDVLVRMKAVGICGSDVHYLKTLRCADFVVKEPMVIGHE 80
           AW  G   L I+  E+     ++V +++ A  +C +D +   TL  AD     P+++GHE
Sbjct: 13  AWEAG-KPLSIEEIEVAPPKAHEVRIKIIATAVCHTDAY---TLSGADPEGCFPVILGHE 68
Query: 81  CAGVIEKVGSEVKTLVPGDRVALEPGISCWRCDHCKGGRYNLCPEMKFFATPPVHGSLAN 140
            AG++E VG  V  L  GD V       C  C  C   + NLC +++      +     +
Sbjct: 69  GAGIVESVGEGVTKLKAGDTVIPLYIPQCGECKFCLNPKTNLCQKIRVTQGKGLMPDGTS 128
Query: 141 QVVHPADLCFKLPDNVSLEEGAMCEPLSVGL----------------------HACRRAN 178
           +               +  E  +   +SV                         A   A 
Sbjct: 129 RFTCKGKTILHYMGTSTFSEYTVVADISVAKIDPLAPLDKVCLLGCGISTGYGAAVNTAK 188
Query: 179 IGPETNVLIMGAGPIGLVTMLGAPRAFGAPRIVIVDVDDYRLSVAKEIGADNIVKVSTNL 238
           + P +   + G G +GL  ++G   A GA RI+ VD++  + + AKE GA   +    N 
Sbjct: 189 LEPGSVCAVFGLGGVGLAVIMGCKVA-GASRIIGVDINKDKFARAKEFGATECI----NP 243
Query: 239 QDIAEEVEKIQKAMGTG-IDVSFDCAGLNKTMSTALGATCAGGKVCLVGMGHHEMTVPLT 297
           QD ++ ++++   M  G +D SF+C G  K M  AL A   G            +     
Sbjct: 244 QDFSKPIQEVLIEMTDGGVDYSFECIGNVKVMRAALEACHKG----WGVSVVVGVAASGE 299
Query: 298 PAAVREVDVVGVFRYKNT----W------PLCLELLRSGKIDVKPLVTHRFGFSQKEVEE 347
             A R   +V    +K T    W      P  +    S KI V   VTH   F   E+ +
Sbjct: 300 EIATRPFQLVTGRTWKGTAFGGWKSVESVPKLVSEYMSKKIKVDEFVTHNLSFD--EINK 357
Query: 348 AFETSARG 355
           AFE    G
Sbjct: 358 AFELMHSG 365

>pdb|1TEH|A Chain A, Structure Of Human Liver Chichi Alcohol Dehydrogenase (A Glutathione- Dependent Formaldehyde Dehydrogenase) Length = 373

Iteration: 1
 Score = 84.0 bits (206), Expect = 1e-16,   Method: Compositional matrix adjust.
 Identities = 93/368 (25%), Positives = 144/368 (39%), Gaps = 48/368 (13%)
Query: 21  AWLLGVNTLKIQPFELPSLGPYDVLVRMKAVGICGSDVHYLKTLRCADFVVKEPMVIGHE 80
           AW  G   L I+  E+     ++V +++ A  +C +D +   TL  AD     P+++GHE
Sbjct: 12  AWEAG-KPLSIEEIEVAPPKAHEVRIKIIATAVCHTDAY---TLSGADPEGCFPVILGHE 67
Query: 81  CAGVIEKVGSEVKTLVPGDRVALEPGISCWRCDHCKGGRYNLCPEMKFFATPPVHGSLAN 140
            AG++E VG  V  L  GD V       C  C  C   + NLC +++      +     +
Sbjct: 68  GAGIVESVGEGVTKLKAGDTVIPLYIPQCGECKFCLNPKTNLCQKIRVTQGKGLMPDGTS 127
Query: 141 QVVHPADLCFKLPDNVSLEEGAMCEPLSVGL----------------------HACRRAN 178
           +               +  E  +   +SV                         A   A 
Sbjct: 128 RFTCKGKTILHYMGTSTFSEYTVVADISVAKIDPLAPLDKVCLLGCGISTGYGAAVNTAK 187
Query: 179 IGPETNVLIMGAGPIGLVTMLGAPRAFGAPRIVIVDVDDYRLSVAKEIGADNIVKVSTNL 238
           + P +   + G G +GL  ++G   A GA RI+ VD++  + + AKE GA   +    N 
Sbjct: 188 LEPGSVCAVFGLGGVGLAVIMGCKVA-GASRIIGVDINKDKFARAKEFGATECI----NP 242
Query: 239 QDIAEEVEKIQKAMGTG-IDVSFDCAGLNKTMSTALGATCAGGKVCLVGMGHHEMTVPLT 297
           QD ++ ++++   M  G +D SF+C G  K M  AL A   G            +     
Sbjct: 243 QDFSKPIQEVLIEMTDGGVDYSFECIGNVKVMRAALEACHKG----WGVSVVVGVAASGE 298
Query: 298 PAAVREVDVVGVFRYKNT----W------PLCLELLRSGKIDVKPLVTHRFGFSQKEVEE 347
             A R   +V    +K T    W      P  +    S KI V   VTH   F   E+ +
Sbjct: 299 EIATRPFQLVTGRTWKGTAFGGWKSVESVPKLVSEYMSKKIKVDEFVTHNLSFD--EINK 356
Query: 348 AFETSARG 355
           AFE    G
Sbjct: 357 AFELMHSG 364

>pdb|3QJ5|A Chain A, S-Nitrosoglutathione Reductase (Gsnor) In Complex With N6022 Length = 374

Iteration: 1
 Score = 83.6 bits (205), Expect = 2e-16,   Method: Compositional matrix adjust.
 Identities = 93/368 (25%), Positives = 144/368 (39%), Gaps = 48/368 (13%)
Query: 21  AWLLGVNTLKIQPFELPSLGPYDVLVRMKAVGICGSDVHYLKTLRCADFVVKEPMVIGHE 80
           AW  G   L I+  E+     ++V +++ A  +C +D +   TL  AD     P+++GHE
Sbjct: 13  AWEAG-KPLSIEEIEVAPPKAHEVRIKIIATAVCHTDAY---TLSGADPEGCFPVILGHE 68
Query: 81  CAGVIEKVGSEVKTLVPGDRVALEPGISCWRCDHCKGGRYNLCPEMKFFATPPVHGSLAN 140
            AG++E VG  V  L  GD V       C  C  C   + NLC +++      +     +
Sbjct: 69  GAGIVESVGEGVTKLKAGDTVIPLYIPQCGECKFCLNPKTNLCQKIRVTQGKGLMPDGTS 128
Query: 141 QVVHPADLCFKLPDNVSLEEGAMCEPLSVGL----------------------HACRRAN 178
           +               +  E  +   +SV                         A   A 
Sbjct: 129 RFTCKGKTILHYMGTSTFSEYTVVADISVAKIDPLAPLDKVCLLGCGISTGYGAAVNTAK 188
Query: 179 IGPETNVLIMGAGPIGLVTMLGAPRAFGAPRIVIVDVDDYRLSVAKEIGADNIVKVSTNL 238
           + P +   + G G +GL  ++G   A GA RI+ VD++  + + AKE GA   +    N 
Sbjct: 189 LEPGSVCAVFGLGGVGLAVIMGCKVA-GASRIIGVDINKDKFARAKEFGATECI----NP 243
Query: 239 QDIAEEVEKIQKAMGTG-IDVSFDCAGLNKTMSTALGATCAGGKVCLVGMGHHEMTVPLT 297
           QD ++ ++++   M  G +D SF+C G  K M  AL A   G            +     
Sbjct: 244 QDFSKPIQEVLIEMTDGGVDYSFECIGNVKVMRAALEACHKG----WGVSVVVGVAASGE 299
Query: 298 PAAVREVDVVGVFRYKNT----W------PLCLELLRSGKIDVKPLVTHRFGFSQKEVEE 347
             A R   +V    +K T    W      P  +    S KI V   VTH   F   E+ +
Sbjct: 300 EIATRPFQLVTGRTWKGTAFGGWKSVESVPKLVSEYMSKKIKVDEFVTHNLSFD--EINK 357
Query: 348 AFETSARG 355
           AFE    G
Sbjct: 358 AFELMHSG 365

>pdb|1P0C|A Chain A, Crystal Structure Of The Nadp(H)-Dependent Vertebrate Alcohol Dehydrogenase (Adh8) Length = 373

Iteration: 1
 Score = 83.2 bits (204), Expect = 2e-16,   Method: Compositional matrix adjust.
 Identities = 87/350 (24%), Positives = 149/350 (42%), Gaps = 40/350 (11%)
Query: 42  YDVLVRMKAVGICGSDVHYLKTLRCADFVVKEPMVIGHECAGVIEKVGSEVKTLVPGDRV 101
           ++V +++ A GICGSD   LK +  + F    P+++GHE  GV+E +G+ V  + PGD+V
Sbjct: 35  HEVRIKILASGICGSDSSVLKEIIPSKF----PVILGHEAVGVVESIGAGVTCVKPGDKV 90
Query: 102 ALEPGISCWRCDHCKGGRYNLCPEMKFFATPPVHGSLANQVVHPADLCFKLPDNVSLEEG 161
                  C  C  CK    N C +    A   +   + ++        + L    +  E 
Sbjct: 91  IPLFVPQCGSCRACKSSNSNFCEKNDMGAKTGLMADMTSRFTCRGKPIYNLMGTSTFTEY 150
Query: 162 AMCEPLSVG-------LHAC--------------RRANIGPETNVLIMGAGPIGLVTMLG 200
            +   ++V        L +C                A + P +   + G G +G   ++G
Sbjct: 151 TVVADIAVAKIDPKAPLESCLIGCGFATGYGAAVNTAKVTPGSTCAVFGLGGVGFSAIVG 210
Query: 201 APRAFGAPRIVIVDVDDYRLSVAKEIGADNIVKVSTNLQDIAEEV-EKIQKAMGTGIDVS 259
             +A GA RI+ V     +   A E+GA   +    N +D  + + E I +    G+D +
Sbjct: 211 C-KAAGASRIIGVGTHKDKFPKAIELGATECL----NPKDYDKPIYEVICEKTNGGVDYA 265
Query: 260 FDCAGLNKTMSTALGAT-CAGGKVCLVGMG---HHEMTVPLTPAAVREV--DVVGVFRYK 313
            +CAG  +TM  AL +T C  G   ++G+          PL     R +   V G F+ +
Sbjct: 266 VECAGRIETMMNALQSTYCGSGVTVVLGLASPNERLPLDPLLLLTGRSLKGSVFGGFKGE 325
Query: 314 NTWPLCLELLRSGKIDVKPLVTHRFGFSQKEVEEAFETSARGGTAIKVMF 363
               L  + ++  KI+V  LV+ +    Q  + +AFE  + G     +M 
Sbjct: 326 EVSRLVDDYMKK-KINVNFLVSTKLTLDQ--INKAFELLSSGQGVRSIMI 372

>pdb|1CDO|A Chain A, Alcohol Dehydrogenase (E.C.1.1.1.1) (Ee Isozyme) Complexed With Nicotinamide Adenine Dinucleotide (Nad), And Zinc Length = 374

Iteration: 1
 Score = 82.0 bits (201), Expect = 4e-16,   Method: Compositional matrix adjust.
 Identities = 84/336 (25%), Positives = 148/336 (44%), Gaps = 34/336 (10%)
Query: 29  LKIQPFELPSLGPYDVLVRMKAVGICGSDVHYLKTLRCADFVVKEPMVIGHECAGVIEKV 88
           L I+  E+      ++ +++ A G+C +D+++L   +  D     P+V+GHE AG++E V
Sbjct: 21  LVIEEIEVDVPHANEIRIKIIATGVCHTDLYHLFEGKHKDGF---PVVLGHEGAGIVESV 77
Query: 89  GSEVKTLVPGDRVALEPGISCWRCDHCKGGRYNLCPEMKFFATPPV----------HGSL 138
           G  V    PG++V       C  C  C+  + N C +     +P V           G  
Sbjct: 78  GPGVTEFQPGEKVIPLFISQCGECRFCQSPKTNQCVKGWANESPDVMSPKETRFTCKGRK 137
Query: 139 ANQVVHPADLC-FKLPDNVSLEEGAMCEPL-SVGLHAC----------RRANIGPETNVL 186
             Q +  +    + + + +++ +     PL +V L  C            A + P +   
Sbjct: 138 VLQFLGTSTFSQYTVVNQIAVAKIDPSAPLDTVCLLGCGVSTGFGAAVNTAKVEPGSTCA 197
Query: 187 IMGAGPIGLVTMLGAPRAFGAPRIVIVDVDDYRLSVAKEIGADNIVKVSTNLQDIAEEVE 246
           + G G +GL  ++G   A GA RI+ VD++  +   AK  GA + V  + + + I++ + 
Sbjct: 198 VFGLGAVGLAAVMGCHSA-GAKRIIAVDLNPDKFEKAKVFGATDFVNPNDHSEPISQVLS 256
Query: 247 KIQKAMGTGIDVSFDCAGLNKTMSTALGATCAG-GKVCLVGMG--HHEMTVPLTPAAVR- 302
           K+      G+D S +C G    M  AL +   G G   LVG    H   T P+   A R 
Sbjct: 257 KMTNG---GVDFSLECVGNVGVMRNALESCLKGWGVSVLVGWTDLHDVATRPIQLIAGRT 313
Query: 303 -EVDVVGVFRYKNTWPLCLELLRSGKIDVKPLVTHR 337
            +  + G F+ K+  P  ++     K+ +   +THR
Sbjct: 314 WKGSMFGGFKGKDGVPKMVKAYLDKKVKLDEFITHR 349

>pdb|1AGN|A Chain A, X-Ray Structure Of Human Sigma Alcohol Dehydrogenase Length = 373

Iteration: 1
 Score = 81.3 bits (199), Expect = 9e-16,   Method: Compositional matrix adjust.
 Identities = 82/350 (23%), Positives = 147/350 (42%), Gaps = 39/350 (11%)
Query: 29  LKIQPFELPSLGPYDVLVRMKAVGICGSDVHYLKTLRCADFVVKEPMVIGHECAGVIEKV 88
             I+  E+      +V +++ A GIC +D H +K       V K P+++GHE  G++E +
Sbjct: 21  FSIEEIEVAPPKTKEVRIKILATGICRTDDHVIK----GTMVSKFPVIVGHEATGIVESI 76
Query: 89  GSEVKTLVPGDRVALEPGISCWRCDHCKGGRYNLCPEMKF-----FATPPVHGSLANQVV 143
           G  V T+ PGD+V       C  C+ C+    NLC           A      +   + V
Sbjct: 77  GEGVTTVKPGDKVIPLFLPQCRECNACRNPDGNLCIRSDITGRGVLADGTTRFTCKGKPV 136
Query: 144 HPADLCFKLPDNVSLEEGAMCE------PLSVGLHAC----------RRANIGPETNVLI 187
           H         +   ++E ++ +      P  V L  C          +   + P +  ++
Sbjct: 137 HHFMNTSTFTEYTVVDESSVAKIDDAAPPEKVCLIGCGFSTGYGAAVKTGKVKPGSTCVV 196
Query: 188 MGAGPIGLVTMLGAPRAFGAPRIVIVDVDDYRLSVAKEIGADNIVKVSTNLQDIAEEVEK 247
            G G +GL  ++G   A GA RI+ +D++  +   A  +GA   +    + + I+E + +
Sbjct: 197 FGLGGVGLSVIMGCKSA-GASRIIGIDLNKDKFEKAMAVGATECISPKDSTKPISEVLSE 255
Query: 248 IQKAMGTGIDVSFDCAGLNKTMSTALGATC--AGGKVCLVGMGHHEMTVPLTPAAVREVD 305
           +    G  +  +F+  G  +TM  AL A+C    G   +VG+      +   P  +    
Sbjct: 256 MT---GNNVGYTFEVIGHLETMIDAL-ASCHMNYGTSVVVGVPPSAKMLTYDPMLLFTGR 311
Query: 306 -----VVGVFRYKNTWPLCLELLRSGKIDVKPLVTHRFGFSQKEVEEAFE 350
                V G  + ++  P  +    + K D+  L+TH   F  K++ E FE
Sbjct: 312 TWKGCVFGGLKSRDDVPKLVTEFLAKKFDLDQLITHVLPF--KKISEGFE 359

>pdb|1D1T|A Chain A, Mutant Of Human Sigma Alcohol Dehydrogenase With Leucine At Position 141 Length = 373

Iteration: 1
 Score = 80.9 bits (198), Expect = 9e-16,   Method: Compositional matrix adjust.
 Identities = 82/350 (23%), Positives = 147/350 (42%), Gaps = 39/350 (11%)
Query: 29  LKIQPFELPSLGPYDVLVRMKAVGICGSDVHYLKTLRCADFVVKEPMVIGHECAGVIEKV 88
             I+  E+      +V +++ A GIC +D H +K       V K P+++GHE  G++E +
Sbjct: 21  FSIEEIEVAPPKTKEVRIKILATGICRTDDHVIK----GTMVSKFPVIVGHEATGIVESI 76
Query: 89  GSEVKTLVPGDRVALEPGISCWRCDHCKGGRYNLCPEMKF-----FATPPVHGSLANQVV 143
           G  V T+ PGD+V       C  C+ C+    NLC           A      +   + V
Sbjct: 77  GEGVTTVKPGDKVIPLFLPQCRECNACRNPDGNLCIRSDITGRGVLADGTTRFTCKGKPV 136
Query: 144 HPADLCFKLPDNVSLEEGAMCE------PLSVGLHAC----------RRANIGPETNVLI 187
           H         +   ++E ++ +      P  V L  C          +   + P +  ++
Sbjct: 137 HHFLNTSTFTEYTVVDESSVAKIDDAAPPEKVCLIGCGFSTGYGAAVKTGKVKPGSTCVV 196
Query: 188 MGAGPIGLVTMLGAPRAFGAPRIVIVDVDDYRLSVAKEIGADNIVKVSTNLQDIAEEVEK 247
            G G +GL  ++G   A GA RI+ +D++  +   A  +GA   +    + + I+E + +
Sbjct: 197 FGLGGVGLSVIMGCKSA-GASRIIGIDLNKDKFEKAMAVGATECISPKDSTKPISEVLSE 255
Query: 248 IQKAMGTGIDVSFDCAGLNKTMSTALGATC--AGGKVCLVGMGHHEMTVPLTPAAVREVD 305
           +    G  +  +F+  G  +TM  AL A+C    G   +VG+      +   P  +    
Sbjct: 256 MT---GNNVGYTFEVIGHLETMIDAL-ASCHMNYGTSVVVGVPPSAKMLTYDPMLLFTGR 311
Query: 306 -----VVGVFRYKNTWPLCLELLRSGKIDVKPLVTHRFGFSQKEVEEAFE 350
                V G  + ++  P  +    + K D+  L+TH   F  K++ E FE
Sbjct: 312 TWKGCVFGGLKSRDDVPKLVTEFLAKKFDLDQLITHVLPF--KKISEGFE 359

>pdb|4DL9|A Chain A, Crystal Structure Of S-nitrosoglutathione Reductase From Tomato (solanum Lycopersicum) In Complex With Nad+ Length = 396

Iteration: 1
 Score = 80.9 bits (198), Expect = 1e-15,   Method: Compositional matrix adjust.
 Identities = 87/356 (24%), Positives = 146/356 (41%), Gaps = 47/356 (13%)
Query: 43  DVLVRMKAVGICGSDVHYLKTLRCADFVVKEPMVIGHECAGVIEKVGSEVKTLVPGDRVA 102
           +V V++    +C +D +   T    D     P V+GHE AG++E VG  V  + PGD V 
Sbjct: 53  EVRVKVLYTALCHTDAY---TWSGKDPEGLFPCVLGHEAAGIVESVGEGVTEVQPGDHVI 109
Query: 103 LEPGISCWRCDHCKGGRYNLCPEMK----------------FFATPPVHGSLANQVVHPA 146
                 C  C  CK G+ NLC +++                     P++  +        
Sbjct: 110 PCYQAECRECKFCKSGKTNLCGKVRAATGVGVMMNDRKSRFSINGKPIYHFMGTSTFSQ- 168
Query: 147 DLCFKLPDNVSLEEGAMCEPL-SVGLHAC----------RRANIGPETNVLIMGAGPIGL 195
              + +  +VS+ +     PL  V L  C            A + P + V + G G +GL
Sbjct: 169 ---YTVVHDVSVAKIDPVAPLEKVCLLGCGVPTGLGAVWNTAKVEPGSIVAVFGLGTVGL 225
Query: 196 VTMLGAPRAFGAPRIVIVDVDDYRLSVAKEIGADNIVKVSTNLQDIAEEVEKIQKAMGTG 255
               GA +A GA RI+ +D+D  +   AK  G    +    + Q I + +  +      G
Sbjct: 226 AVAEGA-KAAGASRIIGIDIDSKKFDRAKNFGVTEFINPKEHEQPIQQVIVDLTDG---G 281
Query: 256 IDVSFDCAGLNKTMSTALGATCAG-GKVCLVGM---GHHEMTVP--LTPAAVREVDVVGV 309
           +D SF+C G    M +AL     G G   +VG+   G    T P  L    V +    G 
Sbjct: 282 VDYSFECIGNVSVMRSALECCHKGWGTSVIVGVAASGQEISTRPFQLVTGRVWKGTAFGG 341
Query: 310 FRYKNTWPLCLELLRSGKIDVKPLVTHRFGFSQKEVEEAFETSARGGTAIKVMFNL 365
           F+ ++  P  ++     +I V   +TH    +  ++ +AF+     G  ++V+ ++
Sbjct: 342 FKSRSQVPSLVDKYLKKEIKVDEYITHNMTLA--DINKAFDL-MHDGDCLRVVLDM 394

>pdb|2FZW|A Chain A, Structure Of The Binary Complex Of The E67l Mutant Of Human Glutathione-Dependent Formaldehyde Dehydrogenase With Nad(H) Length = 373

Iteration: 1
 Score = 80.5 bits (197), Expect = 1e-15,   Method: Compositional matrix adjust.
 Identities = 92/368 (25%), Positives = 143/368 (38%), Gaps = 48/368 (13%)
Query: 21  AWLLGVNTLKIQPFELPSLGPYDVLVRMKAVGICGSDVHYLKTLRCADFVVKEPMVIGHE 80
           AW  G   L I+  E+     ++V +++ A  +C +D +   TL  AD     P+++GH 
Sbjct: 12  AWEAG-KPLSIEEIEVAPPKAHEVRIKIIATAVCHTDAY---TLSGADPEGCFPVILGHL 67
Query: 81  CAGVIEKVGSEVKTLVPGDRVALEPGISCWRCDHCKGGRYNLCPEMKFFATPPVHGSLAN 140
            AG++E VG  V  L  GD V       C  C  C   + NLC +++      +     +
Sbjct: 68  GAGIVESVGEGVTKLKAGDTVIPLYIPQCGECKFCLNPKTNLCQKIRVTQGKGLMPDGTS 127
Query: 141 QVVHPADLCFKLPDNVSLEEGAMCEPLSVGL----------------------HACRRAN 178
           +               +  E  +   +SV                         A   A 
Sbjct: 128 RFTCKGKTILHYMGTSTFSEYTVVADISVAKIDPLAPLDKVCLLGCGISTGYGAAVNTAK 187
Query: 179 IGPETNVLIMGAGPIGLVTMLGAPRAFGAPRIVIVDVDDYRLSVAKEIGADNIVKVSTNL 238
           + P +   + G G +GL  ++G   A GA RI+ VD++  + + AKE GA   +    N 
Sbjct: 188 LEPGSVCAVFGLGGVGLAVIMGCKVA-GASRIIGVDINKDKFARAKEFGATECI----NP 242
Query: 239 QDIAEEVEKIQKAMGTG-IDVSFDCAGLNKTMSTALGATCAGGKVCLVGMGHHEMTVPLT 297
           QD ++ ++++   M  G +D SF+C G  K M  AL A   G            +     
Sbjct: 243 QDFSKPIQEVLIEMTDGGVDYSFECIGNVKVMRAALEACHKG----WGVSVVVGVAASGE 298
Query: 298 PAAVREVDVVGVFRYKNT----W------PLCLELLRSGKIDVKPLVTHRFGFSQKEVEE 347
             A R   +V    +K T    W      P  +    S KI V   VTH   F   E+ +
Sbjct: 299 EIATRPFQLVTGRTWKGTAFGGWKSVESVPKLVSEYMSKKIKVDEFVTHNLSFD--EINK 356
Query: 348 AFETSARG 355
           AFE    G
Sbjct: 357 AFELMHSG 364

>pdb|1YQD|A Chain A, Sinapyl Alcohol Dehydrogenase Complexed With Nadp+ Length = 366

Iteration: 1
 Score = 73.6 bits (179), Expect = 2e-13,   Method: Compositional matrix adjust.
 Identities = 82/306 (26%), Positives = 134/306 (43%), Gaps = 27/306 (8%)
Query: 2   GKGGMSQGEKEDGEEVNMAAWLLGVNTLKIQPFELP--SLGPYDVLVRMKAVGICGSDVH 59
           G  GMS+  +E+   V    W     +  + PF     + G  DV  ++   G+C SD+H
Sbjct: 1   GSHGMSKSPEEE-HPVKAFGWAARDQSGHLSPFNFSRRATGEEDVRFKVLYCGVCHSDLH 59
Query: 60  YLKTLRCADF-VVKEPMVIGHECAGVIEKVGSEVKTLVPGDRVALEPGI-SCWRCDHCKG 117
            +K     D+     P+V GHE  G + +VGS+VK +  GD+V +   + +C  C+ C  
Sbjct: 60  SIKN----DWGFSMYPLVPGHEIVGEVTEVGSKVKKVNVGDKVGVGCLVGACHSCESCAN 115
Query: 118 GRYNLCPEMKFFATPPVH------GSLANQVVHPADLCFKLPDNVSLEEGA--MCEPLSV 169
              N CP+M        H      G  +N +V       + PDN+ L+ GA  +C  ++V
Sbjct: 116 DLENYCPKMILTYASIYHDGTITYGGYSNHMVANERYIIRFPDNMPLDGGAPLLCAGITV 175
Query: 170 GLHACRRANIGPETNVLIMGAGPIGLVTMLGAPRAFGAPRIVIVDVDDYRLSVAKEIGAD 229
                      P  ++ I+G G +G V +  A +AFG+   VI      +    K  GAD
Sbjct: 176 YSPLKYFGLDEPGKHIGIVGLGGLGHVAVKFA-KAFGSKVTVISTSPSKKEEALKNFGAD 234
Query: 230 NIVKVSTNLQDIAEEVEKIQKAMGTGIDVSFDCAGLNKTMSTALGATCAGGKVCLVGMGH 289
           + +        ++ + E++Q A GT +D   D       +    G   + GK+ LVG   
Sbjct: 235 SFL--------VSRDQEQMQAAAGT-LDGIIDTVSAVHPLLPLFGLLKSHGKLILVGAPE 285
Query: 290 HEMTVP 295
             + +P
Sbjct: 286 KPLELP 291

>pdb|2DPH|A Chain A, Crystal Structure Of Formaldehyde Dismutase Length = 398

Iteration: 1
 Score = 71.2 bits (173), Expect = 8e-13,   Method: Compositional matrix adjust.
 Identities = 79/308 (25%), Positives = 136/308 (44%), Gaps = 48/308 (15%)
Query: 18  NMAAWLLGVNTLKIQPFELPSLG------PYDVLVRMKAVGICGSDVHYLKTLRCADFVV 71
           N +    G   L+++    P L        + V++++ +  ICGSD H  +      F+V
Sbjct: 3   NKSVVYHGTRDLRVETVPYPKLEHNNRKLEHAVILKVVSTNICGSDQHIYR----GRFIV 58
Query: 72  KEPMVIGHECAGVIEKVGSEVKTLVPGDRVALEPGISCWRCDHCKGGRYNLC------PE 125
            +  V+GHE  G + + GS+V+ +  GD V++   ++C RC +CK  R ++C      P+
Sbjct: 59  PKGHVLGHEITGEVVEKGSDVELMDIGDLVSVPFNVACGRCRNCKEARSDVCENNLVNPD 118
Query: 126 MKF----FATPPVHGSLANQVVHP-AD-LCFKLPDNVSLEEGA-----MCEPLSVGLHAC 174
                  F      G  A  V+ P AD +  K  D     E       + + L  G H C
Sbjct: 119 ADLGAFGFDLKGWSGGQAEYVLVPYADYMLLKFGDKEQAMEKIKDLTLISDILPTGFHGC 178
Query: 175 RRANIGPETNVLIMGAGPIGLVTMLGAPRAFGAPRIVIVDVDDYRLSVAKEIGADNIVKV 234
             A + P ++V I GAGP+G     GA     A  +++ D +  RL +  + G + I   
Sbjct: 179 VSAGVKPGSHVYIAGAGPVGRCAAAGARLLGAAC-VIVGDQNPERLKLLSDAGFETI--- 234
Query: 235 STNLQDIAEEVEKIQKAMGT-----GID-VSFDCAGL---------NKTMSTALGATCAG 279
             +L++ A   ++I + +G      G+D V F+  GL         N  +++      AG
Sbjct: 235 --DLRNSAPLRDQIDQILGKPEVDCGVDAVGFEAHGLGDEANTETPNGALNSLFDVVRAG 292
Query: 280 GKVCLVGM 287
           G + + G+
Sbjct: 293 GAIGIPGI 300

>pdb|2H6E|A Chain A, Crystal Structure Of The D-Arabinose Dehydrogenase From Sulfolobus Solfataricus Length = 344

Iteration: 1
 Score = 67.0 bits (162), Expect = 2e-11,   Method: Compositional matrix adjust.
 Identities = 72/311 (23%), Positives = 128/311 (41%), Gaps = 15/311 (4%)
Query: 29  LKIQPFELPSLGPYDVLVRMKAVGICGSDVHYLKTLRCADFVVKEPMVIGHECAGVIEKV 88
           L I+   +P     +VL+R+   G+C +D+   K +  A    + P+++GHE AG I +V
Sbjct: 16  LSIEDVNIPEPQGEEVLIRIGGAGVCRTDLRVWKGVE-AKQGFRLPIILGHENAGTIVEV 74
Query: 89  GSEVKTLVPGDRVALEPGISCWRCDHCKGGRYNLCPEMKFFATPPVHGSLANQVVHPADL 148
           G E+  +  GD V +        C +C+ G++N+C            G     +V  +  
Sbjct: 75  G-ELAKVKKGDNVVVYATWGDLTCRYCREGKFNICKNQIIPGQTTNGGFSEYMLVKSSRW 133
Query: 149 CFKLPDNVSLEEGAMCEPLSVGLHACRRA----NIGPETNVLIMGAGPIGLVTMLGAPRA 204
             KL     +E   + +  +  + A R+A    +   E  V++ G G + + T+      
Sbjct: 134 LVKLNSLSPVEAAPLADAGTTSMGAIRQALPFISKFAEPVVIVNGIGGLAVYTIQILKAL 193
Query: 205 FGAPRIVIVDVDDYRLSVAKEIGADNIVKVSTNLQDIAEEVEKIQKAMGTGIDVSFDCAG 264
                IV +         A E+GAD +    + ++D    + K+   +G  I  + D  G
Sbjct: 194 MKNITIVGISRSKKHRDFALELGADYV----SEMKDAESLINKLTDGLGASI--AIDLVG 247
Query: 265 LNKTMSTALGATCAGGKVCLVGMGHHEMTVPLTPAAVREVDVVGV-FRYKNTWPLCLELL 323
             +T           G + LVGM    +++     AV    ++G  +   N     + L 
Sbjct: 248 TEETTYNLGKLLAQEGAIILVGMEGKRVSLEAFDTAVWNKKLLGSNYGSLNDLEDVVRLS 307
Query: 324 RSGKIDVKPLV 334
            SGKI  KP +
Sbjct: 308 ESGKI--KPYI 316

>pdb|1KOL|A Chain A, Crystal Structure Of Formaldehyde Dehydrogenase Length = 398

Iteration: 1
 Score = 64.3 bits (155), Expect = 1e-10,   Method: Compositional matrix adjust.
 Identities = 63/233 (27%), Positives = 103/233 (44%), Gaps = 28/233 (12%)
Query: 18  NMAAWLLGVNTLKIQPFELPSLG-------PYDVLVRMKAVGICGSDVHYLKTLRCADFV 70
           N     LG   +++Q  + P +         + V++++ +  ICGSD H ++    A   
Sbjct: 3   NRGVVYLGSGKVEVQKIDYPKMQDPRGKKIEHGVILKVVSTNICGSDQHMVRGRTTAQV- 61
Query: 71  VKEPMVIGHECAGVIEKVGSEVKTLVPGDRVALEPGISCWRCDHCKGGRYNLCPEMK--- 127
               +V+GHE  G + + G +V+ L  GD V++   ++C RC  CK     +C  +    
Sbjct: 62  ---GLVLGHEITGEVIEKGRDVENLQIGDLVSVPFNVACGRCRSCKEMHTGVCLTVNPAR 118
Query: 128 ------FFATPPVHGSLANQVVHP-ADL-CFKLPDNVSLEEG-----AMCEPLSVGLHAC 174
                 +       G  A  V+ P AD    KLPD     E       + + L  G H  
Sbjct: 119 AGGAYGYVDMGDWTGGQAEYVLVPYADFNLLKLPDRDKAMEKIRDLTCLSDILPTGYHGA 178
Query: 175 RRANIGPETNVLIMGAGPIGLVTMLGAPRAFGAPRIVIVDVDDYRLSVAKEIG 227
             A +GP + V + GAGP+GL     + R  GA  +++ D++  RL+ AK  G
Sbjct: 179 VTAGVGPGSTVYVAGAGPVGLAAAA-SARLLGAAVVIVGDLNPARLAHAKAQG 230

>pdb|1WLY|A Chain A, Crystal Structure Of 2-haloacrylate Reductase Length = 333

Iteration: 1
 Score = 58.9 bits (141), Expect = 4e-09,   Method: Compositional matrix adjust.
 Identities = 62/232 (26%), Positives = 106/232 (45%), Gaps = 38/232 (16%)
Query: 38  SLGPYDVLVRMKAVGICGSDVHYLKTLRCADFVVKEPMVIGHECAGVIEKVGSEVKTLVP 97
           S GP  V +R  A+G+   D ++   +     V + P+V+G E A V+E+VG  V     
Sbjct: 25  SPGPGQVRLRNTAIGVNFLDTYHRAGIPHPLVVGEPPIVVGFEAAAVVEEVGPGVTDFTV 84
Query: 98  GDRVALEPGISCWRCDHCKGGRYNLCPEMKFFATPPVHGSLANQVVHPADLCFKLPDNVS 157
           G+RV      +C                      PP+ G+ + + ++PA+   K+P ++ 
Sbjct: 85  GERVC-----TC---------------------LPPL-GAYSQERLYPAEKLIKVPKDLD 117
Query: 158 LEE----GAMCEPLSVGLHACRRANIGPETNVLI-MGAGPIGLVTMLGAPRAFGAPRIVI 212
           L++    G M + ++      +   + P   VLI   AG +G + M+   R  GA  I  
Sbjct: 118 LDDVHLAGLMLKGMTAQYLLHQTHKVKPGDYVLIHAAAGGMGHI-MVPWARHLGATVIGT 176
Query: 213 VDVDDYRLSVAKEIGADNIVKVSTNLQDIAEEVEKIQKAMGTGIDVSFDCAG 264
           V  ++ +   A+++G  + +  ST  QD AE V +I    G G+DV +D  G
Sbjct: 177 VSTEE-KAETARKLGCHHTINYST--QDFAEVVREITG--GKGVDVVYDSIG 223

>pdb|3UOG|A Chain A, Crystal Structure Of Putative Alcohol Dehydrogenase From Sinorhizobium Meliloti 1021 Length = 363

Iteration: 1
 Score = 58.9 bits (141), Expect = 4e-09,   Method: Compositional matrix adjust.
 Identities = 83/336 (24%), Positives = 142/336 (42%), Gaps = 27/336 (8%)
Query: 27  NTLKIQPFELPSLGPYDVLVRMKAVGICGSDVHYLKTLRCADFVVKEPMVIGHECAGVIE 86
           + LK+    +P  G +D++VR  AV +   D   L+T    D     P V   + +GV+E
Sbjct: 39  HDLKLAERPVPEAGEHDIIVRTLAVSLNYRDKLVLETGXGLDLAF--PFVPASDXSGVVE 96
Query: 87  KVGSEVKTLVPGDRVALEPGISCWRCDHCKGGRYNLCPEMKFFATPPVH-GSLANQVVHP 145
            VG  V    PGDRV     IS +      G R        +      H G L+  VV P
Sbjct: 97  AVGKSVTRFRPGDRV-----ISTFAPGWLDGLRPGTGRTPAYETLGGAHPGVLSEYVVLP 151
Query: 146 ADLCFKLPDNVSLEEGAM--CEPLSVGLHACRRANIGPETNVLIMGAGPIGLVTMLGAPR 203
                  P ++   E +   C  L+       + ++     V++ G G + L  +  A +
Sbjct: 152 EGWFVAAPKSLDAAEASTLPCAGLTAWFALVEKGHLRAGDRVVVQGTGGVALFGLQIA-K 210
Query: 204 AFGAPRIVIVDVDDYRLSVAKEIGADNIVKVSTNLQDIAEEVEKIQKAMGT-GIDVSFDC 262
           A GA  +++      +L  A  +GAD+ +     L++  + VE++    G  G D   + 
Sbjct: 211 ATGA-EVIVTSSSREKLDRAFALGADHGIN---RLEE--DWVERVYALTGDRGADHILEI 264
Query: 263 AGLNKTMSTALGATCAGGKVCLVG-MGHHEMTVPLTPAAVREVDVVGVFRYKNTWPLCLE 321
           AG    +  +L A    G++ ++G +   E++ P+ P  ++   V G+          LE
Sbjct: 265 AG-GAGLGQSLKAVAPDGRISVIGVLEGFEVSGPVGPLLLKSPVVQGISVGHRR---ALE 320
Query: 322 LLRSG--KIDVKPLVTHRFGFSQKEVEEAFETSARG 355
            L     ++ +KP++  R+ F+  EV EA     RG
Sbjct: 321 DLVGAVDRLGLKPVIDXRYKFT--EVPEALAHLDRG 354

>pdb|3TWO|A Chain A, The Crystal Structure Of Cad From Helicobacter Pylori Complexed With Nadp(H) Length = 348

Iteration: 1
 Score = 58.5 bits (140), Expect = 5e-09,   Method: Compositional matrix adjust.
 Identities = 64/244 (26%), Positives = 107/244 (43%), Gaps = 26/244 (10%)
Query: 29  LKIQPFELPSLGPYDVLVRMKAVGICGSDVHYLKTLRCADFVVKE---PMVIGHECAGVI 85
            K   F   ++GP DVL+ +   GIC SD+H       A    KE   PM+ GHE AG+I
Sbjct: 17  FKPHDFSRHAVGPRDVLIDILYAGICHSDIH------SAYSEWKEGIYPMIPGHEIAGII 70
Query: 86  EKVGSEVKTLVPGDRVALEPGI-SCWRCDHCKGGRYNLCPEM--------KFFATPPVHG 136
           ++VG  VK    GD V +   + SC  C  CK  +   C ++         F    P  G
Sbjct: 71  KEVGKGVKKFKIGDVVGVGCFVNSCKACKPCKEHQEQFCTKVVFTYDCLDSFHDNEPHMG 130
Query: 137 SLANQVVHPADLCFKLPDNVSLEEGA--MCEPLSVGLHACRRANIGPETNVLIMGAGPIG 194
             +N +V   +    +  N  LE+ A  +C  ++      + + +   T V + G G +G
Sbjct: 131 GYSNNIVVDENYVISVDKNAPLEKVAPLLCAGITT-YSPLKFSKVTKGTKVGVAGFGGLG 189
Query: 195 LVTMLGAPRAFGAPRIVIVDVDDYRLSVAKEIGADNIVKVSTNLQDIAEEVEKIQKAMGT 254
            + +  A  A GA  + +   ++++   A  +G  +     T+ +   EE++ I   + T
Sbjct: 190 SMAVKYA-VAMGA-EVSVFARNEHKKQDALSMGVKHFY---TDPKQCKEELDFIISTIPT 244
Query: 255 GIDV 258
             D+
Sbjct: 245 HYDL 248

>pdb|3JYL|A Chain A, Crystal Structures Of Pseudomonas Syringae Pv. Tomato Dc3000 Quinone Oxidoreductase Length = 325

Iteration: 1
 Score = 56.2 bits (134), Expect = 3e-08,   Method: Compositional matrix adjust.
 Identities = 77/265 (29%), Positives = 113/265 (42%), Gaps = 40/265 (15%)
Query: 25  GVNTLKIQPFELPSLGPYDVLVRMKAVGICGSDVHYLKTLRCADFVVKEPMVIGHECAGV 84
           G   L+   FE  + GP  V+VR KA+G+   D +Y   L  A F+   P  +G E AGV
Sbjct: 12  GPEVLEYVDFEPEAPGPQAVVVRNKAIGLNFIDTYYRSGLYPAPFL---PSGLGAEGAGV 68
Query: 85  IEKVGSEVKTLVPGDRVALEPGISCWRCDHCKGGRYNLCPEMKFFATPPVHGSLANQVVH 144
           +E VG EV     GDRVA                          + T P+ G+ +   V 
Sbjct: 69  VEAVGDEVTRFKVGDRVA--------------------------YGTGPL-GAYSEVHVL 101
Query: 145 PADLCFKLPDNVSLEEGA--MCEPLSVGLHACRRANIGPETNVLI-MGAGPIGLVTMLGA 201
           P     KL D+VS E+ A  M + L+V     +   + P   +L    AG +G +    A
Sbjct: 102 PEANLVKLADSVSFEQAAALMLKGLTVQYLLRQTYQVKPGEIILFHAAAGGVGSLACQWA 161
Query: 202 PRAFGAPRIVIVDVDDYRLSVAKEIGADNIVKVSTNLQDIAEEVEKIQKAMGTGIDVSFD 261
            +A GA  I  V   + + + AK +GA   +  S   +D+A+ V ++    G    V +D
Sbjct: 162 -KALGAKLIGTVSSPE-KAAHAKALGAWETIDYSH--EDVAKRVLELTD--GKKCPVVYD 215
Query: 262 CAGLNKTMSTALGATCAGGKVCLVG 286
             G   T  T+L +    G V   G
Sbjct: 216 GVG-QDTWLTSLDSVAPRGLVVSFG 239

>pdb|2HCY|A Chain A, Yeast Alcohol Dehydrogenase I, Saccharomyces Cerevisiae Fermentative Enzyme Length = 347

Iteration: 1
 Score = 53.9 bits (128), Expect = 1e-07,   Method: Compositional matrix adjust.
 Identities = 71/266 (26%), Positives = 115/266 (43%), Gaps = 20/266 (7%)
Query: 29  LKIQPFELPSLGPYDVLVRMKAVGICGSDVHYLKTLRCADFV--VKEPMVIGHECAGVIE 86
           L+ +   +P     ++L+ +K  G+C +D+H        D+   VK P+V GHE AGV+ 
Sbjct: 18  LEYKDIPVPKPKANELLINVKYSGVCHTDLHAWH----GDWPLPVKLPLVGGHEGAGVVV 73
Query: 87  KVGSEVKTLVPGDRVALEP-GISCWRCDHCKGGRYNLCPEMKFFATPPVHGSLANQVVHP 145
            +G  VK    GD   ++    SC  C++C+ G  + CP           GS        
Sbjct: 74  GMGENVKGWKIGDYAGIKWLNGSCMACEYCELGNESNCPHADLSGYTH-DGSFQQYATAD 132
Query: 146 ADLCFKLPDNVSLEEGA--MCEPLSVGLHACRRANIGPETNVLIMG-AGPIGLVTMLGAP 202
           A     +P    L + A  +C  ++V   A + AN+     V I G AG +G + +  A 
Sbjct: 133 AVQAAHIPQGTDLAQVAPILCAGITV-YKALKSANLMAGHWVAISGAAGGLGSLAVQYA- 190
Query: 203 RAFGAPRIVIVDVDDYRLSVAKEIGADNIVKVSTNLQDIAEEVEKIQKAMGTG-IDVSFD 261
           +A G  R++ +D  + +  + + IG +  +   T  +DI   V K       G I+VS  
Sbjct: 191 KAMGY-RVLGIDGGEGKEELFRSIGGEVFIDF-TKEKDIVGAVLKATDGGAHGVINVSVS 248
Query: 262 CAGLNKTMSTALGATCAGGKVCLVGM 287
            A +  +         A G   LVGM
Sbjct: 249 EAAIEASTRYVR----ANGTTVLVGM 270

>pdb|3GOH|A Chain A, Crystal Structure Of Alcohol Dehydrogenase Superfamily Protein (np_718042.1) From Shewanella Oneidensis At 1.55 A Resolution Length = 315

Iteration: 1
 Score = 53.1 bits (126), Expect = 2e-07,   Method: Compositional matrix adjust.
 Identities = 49/180 (27%), Positives = 75/180 (41%), Gaps = 29/180 (16%)
Query: 15  EEVNMAAWLLGVNTLKIQPFELPSLGPYDVLVRMKAVGICGSDVHYLKTLRCADFVVKEP 74
           E+  + A+    +++ +   ++P+L   D+LV+ +A+GI   D  ++K            
Sbjct: 3   EQHQVWAYQTKTHSVTLNSVDIPALAADDILVQNQAIGINPVDWKFIK---ANPINWSNG 59
Query: 75  MVIGHECAGVIEKVGSEVKTLVPGDRVALEPGISCWRCDHCKGGRYNLCPEMKFFATPPV 134
            V G + AGVI KVG++V +   G RVA           H    R               
Sbjct: 60  HVPGVDGAGVIVKVGAKVDSKXLGRRVAY----------HTSLKR--------------- 94
Query: 135 HGSLANQVVHPADLCFKLPDNVSLEEGAMCE-PLSVGLHACRRANIGPETNVLIMGAGPI 193
           HGS A   V   D    LPDN+S E  A    PL     A  +  +  +  VLI+G G +
Sbjct: 95  HGSFAEFTVLNTDRVXTLPDNLSFERAAALPCPLLTAWQAFEKIPLTKQREVLIVGFGAV 154

>pdb|3QWA|A Chain A, Crystal Structure Of Saccharomyces Cerevisiae Zeta-Crystallin-Like Quinone Oxidoreductase Zta1 Length = 334

Iteration: 1
 Score = 53.1 bits (126), Expect = 2e-07,   Method: Compositional matrix adjust.
 Identities = 77/331 (23%), Positives = 135/331 (40%), Gaps = 61/331 (18%)
Query: 25  GVNTLKIQPFELPSLGPYDVLVRMKAVGICGSDVHYLKT-LRCADFVVKEPMVIGHECAG 83
           G + +K + + +PS+   ++L++ K  G     V+Y+++  R   +  ++P V+G E +G
Sbjct: 19  GYDVIKYEDYPVPSISEEELLIKNKYTG-----VNYIESYFRKGIYPCEKPYVLGREASG 73
Query: 84  VIEKVGSEVKTLVPGDRVALEPGISCWRCDHCKGGRYNLCPEMKFFATPPVHGSLANQVV 143
            +   G  V     GD+VA           +    +Y+     K  +  PV         
Sbjct: 74  TVVAKGKGVTNFEVGDQVAY--------ISNSTFAQYS-----KISSQGPV--------- 111
Query: 144 HPADLCFKLPDNVSLEE-----GAMCEPLSVGLHACRRANIGPETNVLIMGA-GPIGLVT 197
                  KLP   S EE       + + L+         ++     VL+  A G +GL+ 
Sbjct: 112 ------MKLPKGTSDEELKLYAAGLLQVLTALSFTNEAYHVKKGDYVLLFAAAGGVGLI- 164
Query: 198 MLGAPRAFGAPRIVIVDVDDYRLSVAKEIGADNIVKVSTNLQDIAEEVEKIQKAMGTGID 257
           +    +  GA  I +   D+ +L +AKE GA+ ++  S   +DI  +V K     G G+D
Sbjct: 165 LNQLLKMKGAHTIAVASTDE-KLKIAKEYGAEYLINASK--EDILRQVLKFTN--GKGVD 219
Query: 258 VSFDCAGLNKTMSTALGATCAGGKVCLVGMGHHEMTVP------LTPAAVREV--DVVGV 309
            SFD  G + T   +L A    G    V  G+    +P      L+P  +  V   + G 
Sbjct: 220 ASFDSVGKD-TFEISLAALKRKG--VFVSFGNASGLIPPFSITRLSPKNITLVRPQLYGY 276
Query: 310 FRYKNTWPLCLE----LLRSGKIDVKPLVTH 336
                 W    +    L+ S K+++K   T+
Sbjct: 277 IADPEEWKYYSDEFFGLVNSKKLNIKIYKTY 307

>pdb|1UUF|A Chain A, Crystal Structure Of A Zinc-Type Alcohol Dehydrogenase-Like Protein Yahk Length = 369

Iteration: 1
 Score = 51.6 bits (122), Expect = 6e-07,   Method: Compositional matrix adjust.
 Identities = 30/88 (34%), Positives = 44/88 (50%), Gaps = 4/88 (4%)
Query: 40  GPYDVLVRMKAVGICGSDVHYLKTLRCADFVVKEPMVIGHECAGVIEKVGSEVKTLVPGD 99
           GP DV + +   G+C SD+H +++          P V GHE  G +  VG +V+   PGD
Sbjct: 46  GPNDVKIEIAYCGVCHSDLHQVRSEWAGTVY---PCVPGHEIVGRVVAVGDQVEKYAPGD 102
Query: 100 RVALEPGI-SCWRCDHCKGGRYNLCPEM 126
            V +   + SC  C+ C+ G  N C  M
Sbjct: 103 LVGVGCIVDSCKHCEECEDGLENYCDHM 130

>pdb|1PS0|A Chain A, Crystal Structure Of The Nadp(H)-Dependent Cinnamyl Alcohol Dehydrogenase From Saccharomyces Cerevisiae Length = 360

Iteration: 1
 Score = 50.4 bits (119), Expect = 1e-06,   Method: Compositional matrix adjust.
 Identities = 37/126 (29%), Positives = 59/126 (46%), Gaps = 17/126 (13%)
Query: 42  YDVLVRMKAVGICGSDVHYLKTLRCAD---FVVKEPMVIGHECAGVIEKVGSEVKT-LVP 97
           +D+ ++++A G+CGSD+H      CA      +K P+V+GHE  G + K+G +  + L  
Sbjct: 34  HDIDIKIEACGVCGSDIH------CAAGHWGNMKMPLVVGHEIVGKVVKLGPKSNSGLKV 87
Query: 98  GDRVALEPGI-SCWRCDHCKGGRYNLCPEMKFFATPPV------HGSLANQVVHPADLCF 150
           G RV +   + SC  CD CK      C +     + P        G  AN V        
Sbjct: 88  GQRVGVGAQVFSCLECDRCKNDNEPYCTKFVTTYSQPYEDGYVSQGGYANYVRVHEHFVV 147
Query: 151 KLPDNV 156
            +P+N+
Sbjct: 148 PIPENI 153

>pdb|4A27|A Chain A, Crystal Structure Of Human Synaptic Vesicle Membrane Protein Vat-1 Homolog-Like Protein Length = 349

Iteration: 1
 Score = 49.3 bits (116), Expect = 4e-06,   Method: Compositional matrix adjust.
 Identities = 56/241 (23%), Positives = 96/241 (39%), Gaps = 42/241 (17%)
Query: 25  GVNTLKIQPFELPSLGPYDVLVRMKAVGICGSDVHYLKTLRCADFVVKEPMVIGHECAGV 84
           G+N L++    +P     ++ +R+KA G+   D+   +     D   K P+V G EC+G+
Sbjct: 14  GLNKLRLFRKAMPEPQDGELKIRVKACGLNFIDLMVRQG--NIDNPPKTPLVPGFECSGI 71
Query: 85  IEKVGSEVKTLVPGDRVALEPGISCWRCDHCKGGRYNLCPEMKFFATPPVHGSLANQVVH 144
           +E +G  VK    GDRV      + W                            A  V  
Sbjct: 72  VEALGDSVKGYEIGDRVMAFVNYNAW----------------------------AEVVCT 103
Query: 145 PADLCFKLPDNVSLEEGAM--CEPLSVGLHACRRANIGPETNVLIMGAGPIGLVTMLGAP 202
           P +  +K+PD++S  E A      ++  +     AN+    +VL+  AG  G V    A 
Sbjct: 104 PVEFVYKIPDDMSFSEAAAFPMNFVTAYVMLFEVANLREGMSVLVHSAG--GGVGQAVAQ 161
Query: 203 RAFGAPRIVIVDVDDYRLSVAKEIGADNIVKVSTNLQDI-AEEVEKIQKAMGTGIDVSFD 261
                P + +          A     + I    T+L D  A+ V+++++    G+D+  D
Sbjct: 162 LCSTVPNVTV-------FGTASTFKHEAIKDSVTHLFDRNADYVQEVKRISAEGVDIVLD 214
Query: 262 C 262
           C
Sbjct: 215 C 215

>pdb|3FBG|A Chain A, Crystal Structure Of A Putative Arginate Lyase From Staphylococcus Haemolyticus Length = 346

Iteration: 1
 Score = 48.1 bits (113), Expect = 8e-06,   Method: Compositional matrix adjust.
 Identities = 54/214 (25%), Positives = 91/214 (42%), Gaps = 45/214 (21%)
Query: 27  NTLKIQPFELPSLGPYDVLVRMKAVGICGSDVHYLKTLRCADFVVKEPMVIGHECAGVIE 86
           N  K    ++P    +++LV+++++ +   D       R  D V K P V+G +  GV+E
Sbjct: 18  NLFKTFNLDIPEPKVHEILVKIQSISVNPVDTKQ----RLMD-VSKAPRVLGFDAIGVVE 72
Query: 87  KVGSEVKTLVPGDRVALEPGISCWRCDHCKGGRYNLCPEMKFFATPPVHGSLANQVVHPA 146
            VG+EV     GD V                          +  +P  +GS A   +   
Sbjct: 73  SVGNEVTMFNQGDIVY-------------------------YSGSPDQNGSNAEYQLINE 107
Query: 147 DLCFKLPDNVSLEEGAMCEPLS-----------VGLHACRRANIGPETNVLIMGAGPIGL 195
            L  K P N+S E+ A+  PL+            G+   R  N G +T ++I GAG +G 
Sbjct: 108 RLVAKAPKNISAEQ-AVSLPLTGITAYETLFDVFGISRNRNENEG-KTLLIINGAGGVGS 165
Query: 196 VTMLGAPRAFGAPRIVIVDVDDYRLSVAKEIGAD 229
           +    A +A+G  R++     +  +   K++GAD
Sbjct: 166 IATQIA-KAYGL-RVITTASRNETIEWTKKMGAD 197

>pdb|3KRT|A Chain A, Crystal Structure Of Putative Crotonyl Coa Reductase From Streptomyces Coelicolor A3(2) Length = 456

Iteration: 1
 Score = 42.7 bits (99), Expect = 3e-04,   Method: Compositional matrix adjust.
 Identities = 83/343 (24%), Positives = 135/343 (39%), Gaps = 53/343 (15%)
Query: 28  TLKIQPFELPSLGPYDVLVRMKAVGICGSDVHY-----LKTL-------RCADFVVKEPM 75
           ++ +    +P LGP + LV + A  +  + VH      L T        R +D   +  +
Sbjct: 57  SIHLDDVPVPELGPGEALVAVMASSVNYNSVHTSIFEPLSTFGFLERYGRVSDLAKRHDL 116
Query: 76  ---VIGHECAGVIEKVGSEVKTLVPGDRVALEPGISCWRCDHCKGGRYN---LCPEMKFF 129
              VIG + AGV+ + G  V     GD V       C   +      +N   L PE + +
Sbjct: 117 PYHVIGSDLAGVVLRTGPGVNAWQAGDEVVAH----CLSVELESSDGHNDTMLDPEQRIW 172
Query: 130 ATPPVHGSLANQVVHPADLCFKLPDNVSLEEGAMCEPLSVGLHACRR------ANIGPET 183
                 G LA   +  ++     PD++S EE A   P  V   A R+      A +    
Sbjct: 173 GFETNFGGLAEIALVKSNQLMPKPDHLSWEEAAA--PGLVNSTAYRQLVSRNGAGMKQGD 230
Query: 184 NVLIMGA-GPIGLVTMLGAPRAFGAPRIVIVDVDDYRLSVAKEIGADNIVKVST------ 236
           NVLI GA G +G      A  A GA  I +V     +  + + +GA+ I+  +       
Sbjct: 231 NVLIWGASGGLGSYATQFA-LAGGANPICVVSSPQ-KAEICRAMGAEAIIDRNAEGYRFW 288
Query: 237 ---NLQDIAEEVEKIQKAM-----GTGIDVSFDCAGLNKTMSTALGATCAGGKV--CLVG 286
              N QD  +E ++  K +     G  ID+ F+  G  +T   ++  T  GG +  C   
Sbjct: 289 KDENTQD-PKEWKRFGKRIRELTGGEDIDIVFEHPG-RETFGASVFVTRKGGTITTCAST 346
Query: 287 MGH-HEMTVPLTPAAVREVDVVGVFRYKNTWPLCLELLRSGKI 328
            G+ HE        +++ +       Y+  W     L+  G+I
Sbjct: 347 SGYMHEYDNRYLWMSLKRIIGSHFANYREAWE-ANRLIAKGRI 388

>pdb|1YB5|A Chain A, Crystal Structure Of Human Zeta-crystallin With Bound Nadp Length = 351

Iteration: 1
 Score = 42.4 bits (98), Expect = 4e-04,   Method: Compositional matrix adjust.
 Identities = 66/282 (23%), Positives = 114/282 (40%), Gaps = 50/282 (17%)
Query: 42  YDVLVRMKAVGICGSDVHYLKTLRCADFVVKE--PMVIGHECAGVIEKVGSEVKTLVPGD 99
           + VL+++ A G+   + +    +R   +  K   P   G + AGVIE VG        GD
Sbjct: 58  HQVLIKVHACGVNPVETY----IRSGTYSRKPLLPYTPGSDVAGVIEAVGDNASAFKKGD 113
Query: 100 RVALEPGISCWRCDHCKGGRYNLCPEMKFFATPPVHGSLANQVVHPADLCFKLPDNVSLE 159
           RV                           F +  + G  A   +      +KLP+ +  +
Sbjct: 114 RV---------------------------FTSSTISGGYAEYALAADHTVYKLPEKLDFK 146
Query: 160 EGAMCE-PLSVGLHA-CRRANIGPETNVLIMGA-GPIGLVTMLGAPRAFGAPRIVIVDVD 216
           +GA    P      A    A +    +VL+ GA G +GL     A RA+G   +     +
Sbjct: 147 QGAAIGIPYFTAYRALIHSACVKAGESVLVHGASGGVGLAACQIA-RAYGLKILGTAGTE 205
Query: 217 DYRLSVAKEIGADNIVKVSTNLQDIAEEVEKIQKAMG-TGIDVSFDCAGLNKTMSTALGA 275
           + +  V +  GA  +     N +++   ++KI+K +G  GID+  +    N  +S  L  
Sbjct: 206 EGQKIVLQN-GAHEVF----NHREV-NYIDKIKKYVGEKGIDIIIEMLA-NVNLSKDLSL 258
Query: 276 TCAGGKVCLVGMGHHEMTVPLTP--AAVREVDVVGVFRYKNT 315
              GG+V +VG      T+ + P     +E  ++GV  + +T
Sbjct: 259 LSHGGRVIVVG---SRGTIEINPRDTMAKESSIIGVTLFSST 297

>pdb|2B5W|A Chain A, Crystal Structure Of D38c Glucose Dehydrogenase Mutant From Haloferax Mediterranei Length = 357

Iteration: 1
 Score = 42.4 bits (98), Expect = 4e-04,   Method: Compositional matrix adjust.
 Identities = 55/264 (20%), Positives = 110/264 (41%), Gaps = 35/264 (13%)
Query: 43  DVLVRMKAVGICGSDVHYLKTLRCADFVVKEPMVIGHECAGVI----EKVGSEVKTLVPG 98
           + LVR   VG+CG+D   +          ++ +V+GHE  GV+    +    E   +VP 
Sbjct: 27  EALVRTLRVGVCGTDHEVIAGGHGGFPEGEDHLVLGHEAVGVVVDPNDTELEEGDIVVPT 86
Query: 99  DRVALEPGISCWRCDHCKGGRYNLCPEMKFFATPPV--HGSLANQVVHPADLCFKLPDNV 156
            R     G +    ++ +  + ++ P+  +F    V  HG ++     P     ++P + 
Sbjct: 87  VRRPPASGTN----EYFERDQPDMAPDGMYFERGIVGAHGYMSEFFTSPEKYLVRIPRSQ 142
Query: 157 SLEEGAMCEPLSVG------LHACRRANIGPETNVLIMGAGPIGLVTML-------GAPR 203
           + E G + EP+S+        +A R A     ++  ++G G +GL+T+        G   
Sbjct: 143 A-ELGFLIEPISITEKALEHAYASRSAFDWDPSSAFVLGNGSLGLLTLAMLKVDDKGYEN 201
Query: 204 AFGAPRIVIVDVDDYRLSVAKEIGADNIVKVSTNLQDIAEEVEKIQKAMGTGIDVSFDCA 263
            +   R    D  D  + + +E+ A  +    T ++D+ +  E+        +D  ++  
Sbjct: 202 LYCLGR---RDRPDPTIDIIEELDATYVDSRQTPVEDVPDVYEQ--------MDFIYEAT 250
Query: 264 GLNKTMSTALGATCAGGKVCLVGM 287
           G  K    ++ A    G   L+G+
Sbjct: 251 GFPKHAIQSVQALAPNGVGALLGV 274

Structure Templates Detected by RPS-BLAST

Original result of RPS-BLAST against PDB70 database

ID	Length	Definition	E-value
Query	365
1pl8_A	356	Human sorbitol dehydrogenase; NAD, oxidoreductase;	1e-173
1e3j_A	352	NADP(H)-dependent ketose reductase; oxidoreductase	1e-169
3m6i_A	363	L-arabinitol 4-dehydrogenase; medium chain dehydro	1e-162
2dq4_A	343	L-threonine 3-dehydrogenase; NAD-dependent, oxidor	1e-155
4ej6_A	370	Putative zinc-binding dehydrogenase; structural ge	1e-153
4a2c_A	346	Galactitol-1-phosphate 5-dehydrogenase; oxidoreduc	1e-148
2d8a_A	348	PH0655, probable L-threonine 3-dehydrogenase; pyro	1e-145
2b5w_A	357	Glucose dehydrogenase; nucleotide binding motif, o	1e-126
3ip1_A	404	Alcohol dehydrogenase, zinc-containing; structural	1e-121
2cdc_A	366	Glucose dehydrogenase glucose 1-dehydrogenase, DHG	2e-95
1vj0_A	380	Alcohol dehydrogenase, zinc-containing; TM0436, st	1e-84
3fpc_A	352	NADP-dependent alcohol dehydrogenase; oxydoreducta	1e-71
1jvb_A	347	NAD(H)-dependent alcohol dehydrogenase; archaeon,	3e-69
3jv7_A	345	ADH-A; dehydrogenase, nucleotide binding, rossmann	1e-65
1h2b_A	359	Alcohol dehydrogenase; oxidoreductase, archaea, hy	3e-62
2h6e_A	344	ADH-4, D-arabinose 1-dehydrogenase; rossman fold,	3e-56
1f8f_A	371	Benzyl alcohol dehydrogenase; rossmann fold, oxido	2e-54
1e3i_A	376	Alcohol dehydrogenase, class II; HET: NAD; 2.08A {	4e-49
2fzw_A	373	Alcohol dehydrogenase class III CHI chain; S-nitro	2e-48
1p0f_A	373	NADP-dependent alcohol dehydrogenase; ADH topology	3e-48
2dph_A	398	Formaldehyde dismutase; dismutation of aldehydes,	1e-47
2jhf_A	374	Alcohol dehydrogenase E chain; oxidoreductase, met	1e-47
1kol_A	398	Formaldehyde dehydrogenase; oxidoreductase; HET: N	1e-46
1cdo_A	374	Alcohol dehydrogenase; oxidoreductase, oxidoreduct	3e-45
3s2e_A	340	Zinc-containing alcohol dehydrogenase superfamily;	1e-44
1rjw_A	339	ADH-HT, alcohol dehydrogenase; oxidoreductase, NAD	3e-43
2hcy_A	347	Alcohol dehydrogenase 1; tetramer of asymmetric di	1e-41
2eih_A	343	Alcohol dehydrogenase; zinc ION binding protein, s	6e-41
3uog_A	363	Alcohol dehydrogenase; structural genomics, protei	7e-40
4a0s_A	447	Octenoyl-COA reductase/carboxylase; oxidoreductase	1e-39
3krt_A	456	Crotonyl COA reductase; structural genomics, prote	5e-39
1zsy_A	357	Mitochondrial 2-enoyl thioester reductase; medium-	8e-35
1gu7_A	364	Enoyl-[acyl-carrier-protein] reductase [NADPH, B-s	2e-33
1piw_A	360	Hypothetical zinc-type alcohol dehydrogenase- like	9e-30
1yqd_A	366	Sinapyl alcohol dehydrogenase; lignin, monolignol,	4e-28
2cf5_A	357	Atccad5, CAD, cinnamyl alcohol dehydrogenase; lign	2e-27
3tqh_A	321	Quinone oxidoreductase; HET: NDP; 2.44A {Coxiella	2e-27
3two_A	348	Mannitol dehydrogenase; cinnamyl-alcohol dehydroge	2e-27
1wly_A	333	CAAR, 2-haloacrylate reductase; NADPH-dependent ox	1e-26
3pi7_A	349	NADH oxidoreductase; groes-like fold, NAD(P)-bindi	2e-26
4eye_A	342	Probable oxidoreductase; structural genomics, niai	2e-26
1uuf_A	369	YAHK, zinc-type alcohol dehydrogenase-like protein	2e-26
3gqv_A	371	Enoyl reductase; medium-chain reductase (MDR super	3e-25
3gms_A	340	Putative NADPH:quinone reductase; structural genom	2e-24
1yb5_A	351	Quinone oxidoreductase; medium-chain dehydrogenase	3e-24
3jyn_A	325	Quinone oxidoreductase; rossmann fold, protein-NAD	4e-24
1qor_A	327	Quinone oxidoreductase; HET: NAP; 2.20A {Escherich	4e-24
3goh_A	315	Alcohol dehydrogenase, zinc-containing; NP_718042.	6e-24
4a27_A	349	Synaptic vesicle membrane protein VAT-1 homolog-L;	1e-23
3iup_A	379	Putative NADPH:quinone oxidoreductase; YP_296108.1	2e-23
3gaz_A	343	Alcohol dehydrogenase superfamily protein; oxidore	7e-22
3qwb_A	334	Probable quinone oxidoreductase; rossmann fold, qu	1e-21
4dup_A	353	Quinone oxidoreductase; PSI-biology, structural ge	3e-21
2vn8_A	375	Reticulon-4-interacting protein 1; mitochondrion,	7e-21
1iz0_A	302	Quinone oxidoreductase; APO-enzyme, riken structur	5e-20
4dvj_A	363	Putative zinc-dependent alcohol dehydrogenase Pro;	6e-20
3fbg_A	346	Putative arginate lyase; structural genomics, unkn	5e-18
2j8z_A	354	Quinone oxidoreductase; medium-chain dehydrogenase	6e-17
3slk_A	795	Polyketide synthase extender module 2; rossmann fo	2e-15
2c0c_A	362	Zinc binding alcohol dehydrogenase, domain contain	3e-15
1tt7_A	330	YHFP; alcohol dehydrogenase, Zn-dependent, NAD, st	3e-05
1xa0_A	328	Putative NADPH dependent oxidoreductases; structur	7e-05
2vz8_A	2512	Fatty acid synthase; transferase, phosphopantethei	2e-04

>1pl8_A Human sorbitol dehydrogenase; NAD, oxidoreductase; HET: NAD; 1.90A {Homo sapiens} SCOP: b.35.1.2 c.2.1.1 PDB: 1pl7_A 1pl6_A* 3qe3_A Length = 356

 Score =  484 bits (1247), Expect = e-173
 Identities = 167/347 (48%), Positives = 231/347 (66%), Gaps = 6/347 (1%)

Query: 18  NMAAWLLGVNTLKIQPFELPSLGPYDVLVRMKAVGICGSDVHYLKTLRCADFVVKEPMVI 77
           N++  + G   L+++ + +P  GP +VL+RM +VGICGSDVHY +  R  +F+VK+PMV+
Sbjct: 8   NLSLVVHGPGDLRLENYPIPEPGPNEVLLRMHSVGICGSDVHYWEYGRIGNFIVKKPMVL 67

Query: 78  GHECAGVIEKVGSEVKTLVPGDRVALEPGISCWRCDHCKGGRYNLCPEMKFFATPPVHGS 137
           GHE +G +EKVGS VK L PGDRVA+EPG      + CK GRYNL P + F ATPP  G+
Sbjct: 68  GHEASGTVEKVGSSVKHLKPGDRVAIEPGAPRENDEFCKMGRYNLSPSIFFCATPPDDGN 127

Query: 138 LANQVVHPADLCFKLPDNVSLEEGAMCEPLSVGLHACRRANIGPETNVLIMGAGPIGLVT 197
           L     H A  C+KLPDNV+ EEGA+ EPLSVG+HACRR  +     VL+ GAGPIG+VT
Sbjct: 128 LCRFYKHNAAFCYKLPDNVTFEEGALIEPLSVGIHACRRGGVTLGHKVLVCGAGPIGMVT 187

Query: 198 MLGAPRAFGAPRIVIVDVDDYRLSVAKEIGADNIVKVSTNLQDIAEEVEKIQKAMGTGID 257
           +L A +A GA ++V+ D+   RLS AKEIGAD ++++S   +   E   K++  +G   +
Sbjct: 188 LLVA-KAMGAAQVVVTDLSATRLSKAKEIGADLVLQISK--ESPQEIARKVEGQLGCKPE 244

Query: 258 VSFDCAGLNKTMSTALGATCAGGKVCLVGMGHHEMTVPLTPAAVREVDVVGVFRYKNTWP 317
           V+ +C G   ++   + AT +GG + LVG+G    TVPL  AA+REVD+ GVFRY NTWP
Sbjct: 245 VTIECTGAEASIQAGIYATRSGGTLVLVGLGSEMTTVPLLHAAIREVDIKGVFRYCNTWP 304

Query: 318 LCLELLRSGKIDVKPLVTHRFGFSQKEVEEAFETSARGGTAIKVMFN 364
           + + +L S  ++VKPLVTHRF    ++  EAFET  + G  +K+M  
Sbjct: 305 VAISMLASKSVNVKPLVTHRFPL--EKALEAFET-FKKGLGLKIMLK 348

>1e3j_A NADP(H)-dependent ketose reductase; oxidoreductase, fructose reduction; 2.3A {Bemisia argentifolii} SCOP: b.35.1.2 c.2.1.1 Length = 352

 Score =  474 bits (1223), Expect = e-169
 Identities = 170/348 (48%), Positives = 230/348 (66%), Gaps = 5/348 (1%)

Query: 18  NMAAWLLGVNTLKIQPFELPSLGPYDVLVRMKAVGICGSDVHYLKTLRCADFVVKEPMVI 77
           N++A L   N L+++   +P     +VL++M  VGICGSDVHY +  R ADF+VK+PMVI
Sbjct: 5   NLSAVLYKQNDLRLEQRPIPEPKEDEVLLQMAYVGICGSDVHYYEHGRIADFIVKDPMVI 64

Query: 78  GHECAGVIEKVGSEVKTLVPGDRVALEPGISCWRCDHCKGGRYNLCPEMKFFATPPVHGS 137
           GHE +G + KVG  VK L  GDRVA+EPG+ C RC  CK G+YNLCP++ F ATPP  G+
Sbjct: 65  GHEASGTVVKVGKNVKHLKKGDRVAVEPGVPCRRCQFCKEGKYNLCPDLTFCATPPDDGN 124

Query: 138 LANQVVHPADLCFKLPDNVSLEEGAMCEPLSVGLHACRRANIGPETNVLIMGAGPIGLVT 197
           LA   VH AD C KLPDNVSLEEGA+ EPLSVG+HACRRA +   T VL++GAGPIGLV+
Sbjct: 125 LARYYVHAADFCHKLPDNVSLEEGALLEPLSVGVHACRRAGVQLGTTVLVIGAGPIGLVS 184

Query: 198 MLGAPRAFGAPRIVIVDVDDYRLSVAKEIGADNIVKVSTNLQDIAEEVEKIQKAMGTGID 257
           +L A +A+GA  +V       RL VAK  GAD  + V    ++ +  +E+I+ A+G   +
Sbjct: 185 VLAA-KAYGA-FVVCTARSPRRLEVAKNCGADVTLVVDPAKEEESSIIERIRSAIGDLPN 242

Query: 258 VSFDCAGLNKTMSTALGATCAGGKVCLVGMGHHEMTVPLTPAAVREVDVVGVFRYKNTWP 317
           V+ DC+G  K ++  +  T  GG + LVGMG   +TVPL  A  RE+D+  VFRY N +P
Sbjct: 243 VTIDCSGNEKCITIGINITRTGGTLMLVGMGSQMVTVPLVNACAREIDIKSVFRYCNDYP 302

Query: 318 LCLELLRSGKIDVKPLVTHRFGFSQKEVEEAFETSARG-GTAIKVMFN 364
           + LE++ SG+ +VK LVTH F    ++  +AFE + +     IKVM +
Sbjct: 303 IALEMVASGRCNVKQLVTHSFKL--EQTVDAFEAARKKADNTIKVMIS 348

>3m6i_A L-arabinitol 4-dehydrogenase; medium chain dehydrogenase/reductase, oxidoreductase; HET: NAD; 2.60A {Neurospora crassa} Length = 363

 Score =  458 bits (1180), Expect = e-162
 Identities = 138/359 (38%), Positives = 202/359 (56%), Gaps = 17/359 (4%)

Query: 15  EEVNMAAWLLGVNTLKIQPFEL--------PSLGPYDVLVRMKAVGICGSDVHYLKTLRC 66
            + N+  +    + L I               L   +V V +++ GICGSDVH+ K    
Sbjct: 6   SKTNIGVFTNPQHDLWISEASPSLESVQKGEELKEGEVTVAVRSTGICGSDVHFWKHGCI 65

Query: 67  ADFVVKEPMVIGHECAGVIEKVGSEVKTLVPGDRVALEPGISCWRCDHCKGGRYNLCPEM 126
              +V+   V+GHE AG +  V   VK++  GDRVA+EP + C  C+ C  GRYN C  +
Sbjct: 66  GPMIVECDHVLGHESAGEVIAVHPSVKSIKVGDRVAIEPQVICNACEPCLTGRYNGCERV 125

Query: 127 KFFATPPVHGSLANQVVHPADLCFKLPDNVSLEEGAMCEPLSVGLHACRRANIGPETNVL 186
            F +TPPV G L   V HPA  C K+ + +S E GAM EPLSV L   +RA +     VL
Sbjct: 126 DFLSTPPVPGLLRRYVNHPAVWCHKIGN-MSYENGAMLEPLSVALAGLQRAGVRLGDPVL 184

Query: 187 IMGAGPIGLVTMLGAPRAFGAPRIVIVDVDDYRLSVAKEIGADNIVKVSTNL--QDIAEE 244
           I GAGPIGL+TML A +A GA  +VI D+D+ RL  AKEI  + +      L  ++ A++
Sbjct: 185 ICGAGPIGLITMLCA-KAAGACPLVITDIDEGRLKFAKEICPEVVTHKVERLSAEESAKK 243

Query: 245 VEKIQKAMGTGIDVSFDCAGLNKTMSTALGATCAGGKVCLVGMGHHEMTVPLTPAAVREV 304
           + +     G    V+ +C G+  +++ A+ A   GGKV ++G+G +E+ +P   A+VREV
Sbjct: 244 IVES--FGGIEPAVALECTGVESSIAAAIWAVKFGGKVFVIGVGKNEIQIPFMRASVREV 301

Query: 305 DVVGVFRYKNTWPLCLELLRSGKIDVKPLVTHRFGFSQKEVEEAFETSARG-GTAIKVM 362
           D+   +RY NTWP  + L+ +G +D+  LVTHRF    ++  +AFET++     AIKV 
Sbjct: 302 DLQFQYRYCNTWPRAIRLVENGLVDLTRLVTHRFPL--EDALKAFETASDPKTGAIKVQ 358

>2dq4_A L-threonine 3-dehydrogenase; NAD-dependent, oxidoreductase, structural genomics, NPPSFA; HET: MES; 2.50A {Thermus thermophilus} PDB: 2ejv_A* Length = 343

 Score =  438 bits (1128), Expect = e-155
 Identities = 107/348 (30%), Positives = 169/348 (48%), Gaps = 14/348 (4%)

Query: 20  AAWLLGVNTLKIQPFELPSLGPYDVLVRMKAVGICGSDVHYLKTLRCADFVVKEPMVIGH 79
            A L     L +    +P  GP ++LVR++A  ICG+D+H  K    A   ++ P+V GH
Sbjct: 4   LAKLAPEEGLTLVDRPVPEPGPGEILVRVEAASICGTDLHIWKWDAWARGRIRPPLVTGH 63

Query: 80  ECAGVIEKVGSEVKTLVPGDRVALEPGISCWRCDHCKGGRYNLCPEMKFFATPPVHGSLA 139
           E +GV+E VG  V+    GD V+LE  I C  C  C+ G Y++C   +        G  A
Sbjct: 64  EFSGVVEAVGPGVRRPQVGDHVSLESHIVCHACPACRTGNYHVCLNTQILGVDR-DGGFA 122

Query: 140 NQVVHPADLCFKLPDNVSLEEGAMCEPLSVGLHACRRANIGPETNVLIMGAGPIGLVTML 199
             VV PA+  +  P ++  E  A+ EP    +H     +     +VLI GAGPIGL+  +
Sbjct: 123 EYVVVPAENAWVNPKDLPFEVAAILEPFGNAVHTVYAGSGVSGKSVLITGAGPIGLMAAM 182

Query: 200 GAPRAFGAPRIVIVDVDDYRLSVAKEIGADNIVKVSTNLQDIAEEVEKIQKAMGTGIDVS 259
              RA GA  I++ D + YRL+ A+      +  +  +L      +E +++  G+G++V 
Sbjct: 183 VV-RASGAGPILVSDPNPYRLAFARPYADRLVNPLEEDL------LEVVRRVTGSGVEVL 235

Query: 260 FDCAGLNKTMSTALGATCAGGKVCLVGMGHHEMTVPLTPAAV-REVDVVGVF--RYKNTW 316
            + +G    +   L A   GG+  ++G+    +   L    V R +   G+   R   TW
Sbjct: 236 LEFSGNEAAIHQGLMALIPGGEARILGIPSDPIRFDLAGELVMRGITAFGIAGRRLWQTW 295

Query: 317 PLCLELLRSGKIDVKPLVTHRFGFSQKEVEEAFETSARGGTAIKVMFN 364
                L+ SG++D+ PL+THR   S     EAF      G A+KV+ +
Sbjct: 296 MQGTALVYSGRVDLSPLLTHRLPLS--RYREAFGL-LASGQAVKVILD 340

>4ej6_A Putative zinc-binding dehydrogenase; structural genomics, nysgrc, PSI-biology, NEW YORK structura genomics research consortium; 1.89A {Sinorhizobium meliloti} PDB: 4ejm_A* Length = 370

 Score =  435 bits (1121), Expect = e-153
 Identities = 105/362 (29%), Positives = 174/362 (48%), Gaps = 14/362 (3%)

Query: 5   GMSQGEKEDGEEVNM-AAWLLGVNTLKIQPFELPSLGPYDVLVRMKAVGICGSDVHYLKT 63
           G+  G +    +  M A  L  V  + ++   +P  GP D+LV+++A GICG+D H L  
Sbjct: 10  GVDLGTENLYFQSMMKAVRLESVGNISVRNVGIPEPGPDDLLVKVEACGICGTDRHLLH- 68

Query: 64  LRCADFVVKEPMVIGHECAGVIEKVGSEVKTLVPGDRVALEPGISCWRCDHCKGGRYNLC 123
               +F    P+ +GHE  G++ + GS V+ + PG R+  +P ISC RC  C+ GR NLC
Sbjct: 69  ---GEFPSTPPVTLGHEFCGIVVEAGSAVRDIAPGARITGDPNISCGRCPQCQAGRVNLC 125

Query: 124 PEMKFFATPPVHGSLANQVVHPADLCFKLPDNVSLEEGAMCEPLSVGLHACRRANIGPET 183
             ++        G  A  V+ P    F++P  +    GA CEPL+  LH    + I   +
Sbjct: 126 RNLRAIGIHR-DGGFAEYVLVPRKQAFEIPLTLDPVHGAFCEPLACCLHGVDLSGIKAGS 184

Query: 184 NVLIMGAGPIGLVTMLGAPRAFGAPRIVIVDVDDYRLSVAKEIGADNIVKVSTNLQDIAE 243
            V I+G G IGL+T+  A R  GA  +++      +  +A+E+GA   V  S    D+ E
Sbjct: 185 TVAILGGGVIGLLTVQLA-RLAGATTVILSTRQATKRRLAEEVGATATVDPSA--GDVVE 241

Query: 244 EVEKIQKAMGTGIDVSFDCAGLNKTMSTALGATCAGGKVCLVGMGHHEMTVPLTPAAV-- 301
            +      +  G+DV  +CAG+ +T+  +     AGG V ++G+      V + P  +  
Sbjct: 242 AIAGPVGLVPGGVDVVIECAGVAETVKQSTRLAKAGGTVVILGVLPQGEKVEIEPFDILF 301

Query: 302 REVDVVGVFRYKNTWPLCLELLRSGKIDVKPLVTHRFGFSQKEVEEAFETSARGGTAIKV 361
           RE+ V+G F          +L+ +G I++  +++ R      E  +           +KV
Sbjct: 302 RELRVLGSFINPFVHRRAADLVATGAIEIDRMISRRISLD--EAPDVISN-PAAAGEVKV 358

Query: 362 MF 363
           + 
Sbjct: 359 LV 360

>4a2c_A Galactitol-1-phosphate 5-dehydrogenase; oxidoreductase, metal binding-site; 1.87A {Escherichia coli} Length = 346

 Score =  422 bits (1087), Expect = e-148
 Identities = 94/354 (26%), Positives = 157/354 (44%), Gaps = 22/354 (6%)

Query: 20  AAWLLGVNTLKIQPFELPSL-GPYDVLVRMKAVGICGSDVHYLKTLRCADFVVKEPMVIG 78
           +        +++    +P +    +V V++ + G+CGSD+  +       +    P+ +G
Sbjct: 3   SVVNDTDGIVRVAESVIPEIKHQDEVRVKIASSGLCGSDLPRIFKNGAHYY----PITLG 58

Query: 79  HECAGVIEKVGSEVKTLVPGDRVALEPGISCWRCDHCKGGRYNLCPEMKFFATPPVHGSL 138
           HE +G I+ VGS V  L PGD VA  P + C+ C  C  G Y+ C +  F  +    G  
Sbjct: 59  HEFSGYIDAVGSGVDDLHPGDAVACVPLLPCFTCPECLKGFYSQCAKYDFIGSRR-DGGF 117

Query: 139 ANQVVHPADLCFKLPDNVSLEEGAMCEPLSVGLHACRRANIGPETNVLIMGAGPIGLVTM 198
           A  +V      F LP ++ +E+GA  EP++VGLHA   A      NV+I+GAG IGL+ +
Sbjct: 118 AEYIVVKRKNVFALPTDMPIEDGAFIEPITVGLHAFHLAQGCENKNVIIIGAGTIGLLAI 177

Query: 199 LGAPRAFGAPRIVIVDVDDYRLSVAKEIGADNIVKVSTNLQDIAEEVEKIQKAMGTGIDV 258
             A  A GA  +  +D+   +L++AK  GA      S       +    +         +
Sbjct: 178 QCA-VALGAKSVTAIDISSEKLALAKSFGAMQTFNSSE--MSAPQMQSVL--RELRFNQL 232

Query: 259 SFDCAGLNKTMSTALGATCAGGKVCLVGMGHHEMTVPLTP---AAVREVDVVGVFRY--- 312
             + AG+ +T+  A+       ++ LVG  H ++ +          +E+ V+G +     
Sbjct: 233 ILETAGVPQTVELAVEIAGPHAQLALVGTLHQDLHLTSATFGKILRKELTVIGSWMNYSS 292

Query: 313 ---KNTWPLCLELLRSGKIDVKPLVTHRFGFSQKEVEEAFETSARGGTAIKVMF 363
                 W     LL   K+ ++PL+ HR  F      +A    AR     KV+ 
Sbjct: 293 PWPGQEWETASRLLTERKLSLEPLIAHRGSFE--SFAQAVRDIARNAMPGKVLL 344

>2d8a_A PH0655, probable L-threonine 3-dehydrogenase; pyrococcus horikoshii OT3, structural genomics; HET: NAD; 2.05A {Pyrococcus horikoshii} PDB: 2dfv_A* 3gfb_A* Length = 348

 Score =  413 bits (1064), Expect = e-145
 Identities = 105/340 (30%), Positives = 180/340 (52%), Gaps = 12/340 (3%)

Query: 29  LKIQPFELPSLGPYDVLVRMKAVGICGSDVHYLKTLRCADFVVKEPMVIGHECAGVIEKV 88
            ++   ++P  GP +VL+++ A  ICG+D+H  +    A   +K P ++GHE AG + ++
Sbjct: 17  AELVEVDVPKPGPGEVLIKVLATSICGTDLHIYEWNEWAQSRIKPPQIMGHEVAGEVVEI 76

Query: 89  GSEVKTLVPGDRVALEPGISCWRCDHCKGGRYNLCPEMKFFATPPVHGSLANQVVHPADL 148
           G  V+ +  GD V++E  I C +C  C+ G+Y++C   K F      G  A   V PA  
Sbjct: 77  GPGVEGIEVGDYVSVETHIVCGKCYACRRGQYHVCQNTKIFGV-DTDGVFAEYAVVPAQN 135

Query: 149 CFKLPDNVSLEEGAMCEPLSVGLHACRRANIGPETNVLIMGAGPIGLVTMLGAPRAFGAP 208
            +K P ++  E   + EPL   +       I  ++ VLI GAGP+GL+ +  A +A GA 
Sbjct: 136 IWKNPKSIPPEYATLQEPLGNAVDTVLAGPISGKS-VLITGAGPLGLLGIAVA-KASGAY 193

Query: 209 RIVIVDVDDYRLSVAKEIGADNIVKVSTNLQDIAEEVEKIQKAMGTGIDVSFDCAGLNKT 268
            +++ +  D+R  +AK++GAD ++      +D+ +EV  I    G G+DV  + +G  K 
Sbjct: 194 PVIVSEPSDFRRELAKKVGADYVINPFE--EDVVKEVMDI--TDGNGVDVFLEFSGAPKA 249

Query: 269 MSTALGATCAGGKVCLVGMGHHEMTVPLTPAAV-REVDVVGVF--RYKNTWPLCLELLRS 325
           +   L A    G+V L+G+   ++T+      + + + + G+       TW     LL+S
Sbjct: 250 LEQGLQAVTPAGRVSLLGLYPGKVTIDFNNLIIFKALTIYGITGRHLWETWYTVSRLLQS 309

Query: 326 GKIDVKPLVTHRFGFSQKEVEEAFETSARGGTAIKVMFNL 365
           GK+++ P++TH++     + EEAFE   R G   KV+F L
Sbjct: 310 GKLNLDPIITHKY-KGFDKYEEAFEL-MRAGKTGKVVFML 347

>2b5w_A Glucose dehydrogenase; nucleotide binding motif, oxidoreductase; HET: FLC NAP; 1.60A {Haloferax mediterranei} PDB: 2b5v_A* 2vwg_A* 2vwh_A* 2vwp_A* 2vwq_A* Length = 357

 Score =  367 bits (943), Expect = e-126
 Identities = 71/364 (19%), Positives = 132/364 (36%), Gaps = 37/364 (10%)

Query: 20  AAWLLGVNTLKIQPFELPSLGPYDVLVRMKAVGICGSDVHYLKTLRCADFVVKEPMVIGH 79
            A   G +   +     P     + LVR   VG+CG+D   +          ++ +V+GH
Sbjct: 4   IAVKRGEDRPVVIEKPRPEPESGEALVRTLRVGVCGTDHEVIAGGHGGFPEGEDHLVLGH 63

Query: 80  ECAGVIEKVGSEVKTLVPGDRVALEPG--ISCWRCDHCKGGRYNLCPEMKFFATPPV--H 135
           E  GV+  V      L  GD V        +    ++ +  + ++ P+  +F    V  H
Sbjct: 64  EAVGVV--VDPNDTELEEGDIVVPTVRRPPASGTNEYFERDQPDMAPDGMYFERGIVGAH 121

Query: 136 GSLANQVVHPADLCFKLPDNVSLEEGAMCEPLSVGLHACRRANI------GPETNVLIMG 189
           G ++     P     ++P + + E G + EP+S+   A   A           ++  ++G
Sbjct: 122 GYMSEFFTSPEKYLVRIPRSQA-ELGFLIEPISITEKALEHAYASRSAFDWDPSSAFVLG 180

Query: 190 AGPIGLVTMLGA-PRAFGAPRIVIV---DVDDYRLSVAKEIGADNIVKVSTNLQDIAEEV 245
            G +GL+T+        G   +  +   D  D  + + +E+ A  +    T ++D+ +  
Sbjct: 181 NGSLGLLTLAMLKVDDKGYENLYCLGRRDRPDPTIDIIEELDATYVDSRQTPVEDVPDVY 240

Query: 246 EKIQKAMGTGIDVSFDCAGLNKTMSTALGATCAGGKVCLVGMGHHEMTVPLTPAA----- 300
           E         +D  ++  G  K    ++ A    G   L+G+           A      
Sbjct: 241 E--------QMDFIYEATGFPKHAIQSVQALAPNGVGALLGVPSDWAFEVDAGAFHREMV 292

Query: 301 VREVDVVGVFRYKN--TWPLCLELLRSGKIDVKPLVTHRFGFSQKEVEEAFETSARGGTA 358
           +    +VG             +   +  K  ++ LVT     S  E E AF+      T 
Sbjct: 293 LHNKALVGSVNSHVEHFEAATVTFTKLPKWFLEDLVTGVHPLS--EFEAAFD---DDDTT 347

Query: 359 IKVM 362
           IK  
Sbjct: 348 IKTA 351

>3ip1_A Alcohol dehydrogenase, zinc-containing; structural genomics, metal-binding, oxidoreductase, PSI-2, protein structure initiative; 2.09A {Thermotoga maritima} Length = 404

 Score =  353 bits (909), Expect = e-121
 Identities = 89/389 (22%), Positives = 167/389 (42%), Gaps = 37/389 (9%)

Query: 3   KGGMSQGEKE-DGEEVNMAAWLLGVNTLKIQPFELPSL-GPYDVLVRMKAVGICGSDVHY 60
           +     G K+ +G+   + + +     ++++    P +  P ++++++KA GICGSDVH 
Sbjct: 15  RPEFKLGPKDIEGKLTWLGSKVWRYPEVRVEEVPEPRIEKPTEIIIKVKACGICGSDVHM 74

Query: 61  LKTLRCADFVV----KEPMVIGHECAGVIEKVGSEV------KTLVPGDRVALEPGISCW 110
            +T      +       P+ +GHE +GV+ + G E       K    G+ V  E  + C 
Sbjct: 75  AQTDEEGYILYPGLTGFPVTLGHEFSGVVVEAGPEAINRRTNKRFEIGEPVCAEEMLWCG 134

Query: 111 RCDHCKGGRYNLCPEMKFFATPPVHGSLANQVVHPADLCFKLPD-------NVSLEEGAM 163
            C  C  G  N C  +       V G+ A  V   A   + L +       +     G++
Sbjct: 135 HCRPCAEGFPNHCENLNELGF-NVDGAFAEYVKVDAKYAWSLRELEGVYEGDRLFLAGSL 193

Query: 164 CEPLSVGLHAC--RRANIGPETNVLIMGAGPIGLVTMLGAPRAFGAPRIVIVDVDDYRLS 221
            EP SV  +A   R   I P  NV+I+G GPIGL  +    +  GA ++++ +  + R +
Sbjct: 194 VEPTSVAYNAVIVRGGGIRPGDNVVILGGGPIGLAAVAIL-KHAGASKVILSEPSEVRRN 252

Query: 222 VAKEIGADNIVKVSTNLQDIAEEVEKIQKAMGTGIDVSFDCAGLNKTMSTALGATCA--- 278
           +AKE+GAD+++  +   ++  E V       G G  +  +  G+ + +   +        
Sbjct: 253 LAKELGADHVIDPTK--ENFVEAVLDY--TNGLGAKLFLEATGVPQLVWPQIEEVIWRAR 308

Query: 279 GGKVCLVGMGHHEMTVPLTPAAV--REVDVVGVFRYK--NTWPLCLELLRSGKIDVKPLV 334
           G    +  +   +  +PLT      R   +VG   +    T+P  + L+ SG +D+  ++
Sbjct: 309 GINATVAIVARADAKIPLTGEVFQVRRAQIVGSQGHSGHGTFPRVISLMASG-MDMTKII 367

Query: 335 THRFGFSQKEVEEAFETSARGGTAIKVMF 363
           +        E+ E  +      + +KV  
Sbjct: 368 SKTVSME--EIPEYIKRLQTDKSLVKVTM 394

>2cdc_A Glucose dehydrogenase glucose 1-dehydrogenase, DHG-1; reductase, oxidoreductase, MDR family; HET: XYS XYP NAP; 1.50A {Sulfolobus solfataricus} PDB: 2cdb_A* 2cd9_A 2cda_A* Length = 366

 Score =  288 bits (738), Expect = 2e-95
 Identities = 65/365 (17%), Positives = 125/365 (34%), Gaps = 46/365 (12%)

Query: 29  LKIQPFELPSL-GPYDVLVRMKAVGICGSDVHYLK--TLRCADFVVKEPMVIGHECAGVI 85
           ++++  +   L     + +R    GICG+D   +            K+ +V+GHE  GV+
Sbjct: 13  VQVKDVDEKKLDSYGKIKIRTIYNGICGADREIVNGKLTLSTLPKGKDFLVLGHEAIGVV 72

Query: 86  EKVGSEVKTLVPGDRVALEPGISCWRCDHCKGGRYNLCPEMKFF--ATPPVHGSLANQVV 143
           E+          GD V       C  C +C  GR + C   +F       + G +     
Sbjct: 73  EESYHGFS---QGDLVMPVNRRGCGICRNCLVGRPDFCETGEFGEAGIHKMDGFMREWWY 129

Query: 144 HPADLCFKLPDNVSLEEGAMCEPLSVGLHACRRA--------------NIGPETNVLIMG 189
                  K+P ++  + G + +PL+    +                         VL++G
Sbjct: 130 DDPKYLVKIPKSIE-DIGILAQPLADIEKSIEEILEVQKRVPVWTCDDGTLNCRKVLVVG 188

Query: 190 AGPIGLVTMLGAPRAFGAPRIVIVDVDDYRLSVAKEIGADNIVKVSTNLQDIAEEVEKIQ 249
            GPIG++  L   R +G    +    +   +               TN  + +   +K++
Sbjct: 189 TGPIGVLFTLLF-RTYGLEVWMANRREPTEVEQTVIEETK------TNYYNSSNGYDKLK 241

Query: 250 KAMGTGIDVSFDCAGLNKT-MSTALGATCAGGKVCLVGMGHHEMTVPLTPAAV-----RE 303
            ++G   DV  D  G +   +   +      G + L G      +VPL    +       
Sbjct: 242 DSVG-KFDVIIDATGADVNILGNVIPLLGRNGVLGLFGFS-TSGSVPLDYKTLQEIVHTN 299

Query: 304 VDVVGVFRYKNT-WPLCLELLRSGKI----DVKPLVTHRFGFSQKEVEEAFETSARG-GT 357
             ++G+   +   +   +  L S K       K L+T     +  + +E  +        
Sbjct: 300 KTIIGLVNGQKPHFQQAVVHLASWKTLYPKAAKMLITKTVSIN--DEKELLKVLREKEHG 357

Query: 358 AIKVM 362
            IK+ 
Sbjct: 358 EIKIR 362

>1vj0_A Alcohol dehydrogenase, zinc-containing; TM0436, structural G JCSG, PSI, protein structure initiative, joint center for S genomics; 2.00A {Thermotoga maritima} SCOP: b.35.1.2 c.2.1.1 Length = 380

 Score =  260 bits (667), Expect = 1e-84
 Identities = 87/355 (24%), Positives = 148/355 (41%), Gaps = 30/355 (8%)

Query: 29  LKIQPFELPSLGPYDVLVRMKAVGICGSDVHYLKTLRCADFVVKEPMVIGHECAGVIEKV 88
           L  + FE+  +    +LV + + G+CGSDVH  +     D  V  P+++GHE AG + +V
Sbjct: 30  LVYKEFEISDIPRGSILVEILSAGVCGSDVHMFRG---EDPRVPLPIILGHEGAGRVVEV 86

Query: 89  GSEVK-----TLVPGDRVALEPGISCWRCDHCK-GGRYNLCPEMKFFATP-------PVH 135
             E +      L PGD +    GI+C  C  CK      LCP  K +           + 
Sbjct: 87  NGEKRDLNGELLKPGDLIVWNRGITCGECYWCKVSKEPYLCPNRKVYGINRGCSEYPHLR 146

Query: 136 GSLANQ-VVHPADLCFKLPDNVSLEEGAMCEP-LSVGLHACRR-ANIGPETNVLIMGAGP 192
           G  ++  V+ P     K+ +   L+  AM     +   HA            V+I GAGP
Sbjct: 147 GCYSSHIVLDPETDVLKVSEKDDLDVLAMAMCSGATAYHAFDEYPESFAGKTVVIQGAGP 206

Query: 193 IGLVTMLGAPRAFGAPRIVIVDVDDYRLSVAKEIGADNIVKVS-TNLQDIAEEVEKIQKA 251
           +GL  ++ A R+ GA  ++++     RL +A+EIGAD  +    T++++  + +  I   
Sbjct: 207 LGLFGVVIA-RSLGAENVIVIAGSPNRLKLAEEIGADLTLNRRETSVEERRKAIMDI--T 263

Query: 252 MGTGIDVSFDCAGLNKTMSTALGATCAGGKVCLVGMGHHEMTVPLTPAAVR---EVDVVG 308
            G G D   +  G ++ +         GG   + G+   +  VP               G
Sbjct: 264 HGRGADFILEATGDSRALLEGSELLRRGGFYSVAGVAVPQDPVPFKVYEWLVLKNATFKG 323

Query: 309 VFRYKNT-WPLCLELLRSGKIDVKPLVTHRFGFSQKEVEEAFETSARGGTAIKVM 362
           ++    + +   + +       +  L+THR      E  +A E       A+KV+
Sbjct: 324 IWVSDTSHFVKTVSITSRNYQLLSKLITHRLPLK--EANKALEL-MESREALKVI 375

>3fpc_A NADP-dependent alcohol dehydrogenase; oxydoreductase, bacterial alcohol dehydrogenase, domain exchange, chimera, metal-binding; 1.40A {Thermoanaerobacter brockii} PDB: 2nvb_A* 1ykf_A* 1bxz_A* 3ftn_A 3fsr_A 1y9a_A* 2oui_A* 3fpl_A* 1jqb_A 1kev_A* 1ped_A 2b83_A Length = 352

 Score =  226 bits (579), Expect = 1e-71
 Identities = 94/358 (26%), Positives = 147/358 (41%), Gaps = 27/358 (7%)

Query: 20  AAWLLGVNTLKIQPFELPSLGPYDVLVRMKAVGICGSDVHYLKTLRCADFVVKEPMVIGH 79
              +L +  +     E P+ GP+D +VR  AV  C SD+H +          +  M++GH
Sbjct: 3   GFAMLSIGKVGWIEKEKPAPGPFDAIVRPLAVAPCTSDIHTVFEGAIG---ERHNMILGH 59

Query: 80  ECAGVIEKVGSEVKTLVPGDRVALEPGISCWRCDHCKGGRYNLCPEMKFF--ATPPVHGS 137
           E  G + +VGSEVK   PGDRV +      WR    + G +     M      +    G 
Sbjct: 60  EAVGEVVEVGSEVKDFKPGDRVVVPAITPDWRTSEVQRGYHQHSGGMLAGWKFSNVKDGV 119

Query: 138 LANQV-VHPADL-CFKLPDNVSLEEGAMC-EPLSVGLHACRRANIGPETNVLIMGAGPIG 194
                 V+ AD+    LP  + LE   M  + ++ G H    ANI     V ++G GP+G
Sbjct: 120 FGEFFHVNDADMNLAHLPKEIPLEAAVMIPDMMTTGFHGAELANIKLGDTVCVIGIGPVG 179

Query: 195 LVTMLGAPRAFGAPRIVIVDVDDYRLSVAKEIGADNIVKVSTNLQDIAEEVEKIQKAMGT 254
           L+++ GA    GA RI  V    +   +A E GA +I+       DI E++ K     G 
Sbjct: 180 LMSVAGA-NHLGAGRIFAVGSRKHCCDIALEYGATDIINYKN--GDIVEQILKATD--GK 234

Query: 255 GIDVSFDCAGLNKTMSTALGATCAGGKVCLVGMGHHEMTVPLTPAA----VREVDVVG-- 308
           G+D      G   T + A+     G  +  V        + +  +     +    + G  
Sbjct: 235 GVDKVVIAGGDVHTFAQAVKMIKPGSDIGNVNYLGEGDNIDIPRSEWGVGMGHKHIHGGL 294

Query: 309 --VFRYKNTWPLCLELLRSGKIDVKPLVTHRF-GFSQKEVEEAFET-SARGGTAIKVM 362
               R        ++L+   ++D   LVTH F GF    +E+AF     +    IK +
Sbjct: 295 CPGGRL--RMERLIDLVFYKRVDPSKLVTHVFRGFD--NIEKAFMLMKDKPKDLIKPV 348

>1jvb_A NAD(H)-dependent alcohol dehydrogenase; archaeon, zinc, oxidoreductase; HET: MSE; 1.85A {Sulfolobus solfataricus} SCOP: b.35.1.2 c.2.1.1 PDB: 1r37_A* 1nto_A 1nvg_A 3i4c_A 2eer_A* Length = 347

 Score =  219 bits (561), Expect = 3e-69
 Identities = 95/333 (28%), Positives = 152/333 (45%), Gaps = 24/333 (7%)

Query: 29  LKIQPFELPSLGPYDVLVRMKAVGICGSDVH-----YLKTLRCADFVVKEPMVIGHECAG 83
           L +Q   +P      VL++++A G+C SDVH     +       D  VK P+ +GHE AG
Sbjct: 13  LSLQEIGVPKPKGPQVLIKVEAAGVCHSDVHMRQGRFGNLRIVEDLGVKLPVTLGHEIAG 72

Query: 84  VIEKVGSEVKTLVPGDRVALEPGISCWRCDHCKGGRYNLCPEMKFFATPPVHGSLANQVV 143
            IE+VG EV     GD VA+ P      C +C+ G  +LC   ++       G+ A  V+
Sbjct: 73  KIEEVGDEVVGYSKGDLVAVNPWQGEGNCYYCRIGEEHLCDSPRWLGI-NFDGAYAEYVI 131

Query: 144 HPADLCFKLPDNVSLEEGAMCEPLS-VGL---HACRRANIGPETNVLIMGA-GPIGLVTM 198
            P          ++  E A   PL+  G+    A R+A++ P   +L++GA G +G + +
Sbjct: 132 VPHYKYMYKLRRLNAVEAA---PLTCSGITTYRAVRKASLDPTKTLLVVGAGGGLGTMAV 188

Query: 199 LGAPRAFGAPRIVIVDVDDYRLSVAKEIGADNIVKVSTNLQDIAEEVEKIQKAMGTGIDV 258
             A +A     I+ VDV +  +  AK  GAD ++  S   QD   E+ +I +    G+D 
Sbjct: 189 QIA-KAVSGATIIGVDVREEAVEAAKRAGADYVINASM--QDPLAEIRRITE--SKGVDA 243

Query: 259 SFDCAGLNKTMSTALGATCAGGKVCLVGMGHHEMTVPLTPAAVREVDVVGVFRY-KNTWP 317
             D     KT+S    A    GK  +VG+   ++        + E+  VG     ++ + 
Sbjct: 244 VIDLNNSEKTLSVYPKALAKQGKYVMVGLFGADLHYHAPLITLSEIQFVGSLVGNQSDFL 303

Query: 318 LCLELLRSGKIDVKPLVTHRFGFSQKEVEEAFE 350
             + L  +GK  VKP++T        E  EA +
Sbjct: 304 GIMRLAEAGK--VKPMITKTMKLE--EANEAID 332

>3jv7_A ADH-A; dehydrogenase, nucleotide binding, rossmann-fold, oxidoreduc; HET: NAD; 2.00A {Rhodococcus ruber} PDB: 2xaa_A* Length = 345

 Score =  210 bits (538), Expect = 1e-65
 Identities = 85/338 (25%), Positives = 137/338 (40%), Gaps = 26/338 (7%)

Query: 29  LKIQPFELPSLGPYDVLVRMKAVGICGSDVHYLKTLRCADFVVKEPMVIGHECAGVIEKV 88
             +     P+ GP ++L+++ A G+C SD+  +     A +    P+ +GHE  G + ++
Sbjct: 13  PVVVDIPTPTPGPGEILLKVTAAGLCHSDIFVMDMPA-AQYAYGLPLTLGHEGVGTVAEL 71

Query: 89  GSEVKTLVPGDRVALEPGISCWRCDHCKGGRYNLCPEMKFFATPP----VHGSLANQVVH 144
           G  V     GD VA+     C  C  C  GR N C         P      GS+A  ++ 
Sbjct: 72  GEGVTGFGVGDAVAVYGPWGCGACHACARGRENYCTRAADLGITPPGLGSPGSMAEYMIV 131

Query: 145 PADLCFKLPDNVSLEEGA--MCEPLSVGLHACRR--ANIGPETNVLIMGAGPIGLVTMLG 200
            +        ++     A      L+   HA  R    +GP +  +++G G +G V +  
Sbjct: 132 DSARHLVPIGDLDPVAAAPLTDAGLTPY-HAISRVLPLLGPGSTAVVIGVGGLGHVGIQI 190

Query: 201 APRAFGAPRIVIVDVDDYRLSVAKEIGADNIVKVSTNLQDIAEEVEKIQKAMGTGIDVSF 260
             RA  A R++ VD+DD RL++A+E+GAD  VK        A+ + ++    G G    F
Sbjct: 191 L-RAVSAARVIAVDLDDDRLALAREVGADAAVKSGA---GAADAIRELTG--GQGATAVF 244

Query: 261 DCAGLNKTMSTALGATCAGGKVCLVGMGHHEMTVPLTPAAVREVDVVGVFRYKNTW---P 317
           D  G   T+ TA       G + +VG+                  VV    Y  T     
Sbjct: 245 DFVGAQSTIDTAQQVVAVDGHISVVGIHAGAHAKVGFFMIPFGASVVTP--YWGTRSELM 302

Query: 318 LCLELLRSGKIDVKPLVTHRFGFSQKEVEEAFETSARG 355
             + L R+G++D   + T  F     E   A+     G
Sbjct: 303 EVVALARAGRLD---IHTETFTLD--EGPAAYRRLREG 335

>1h2b_A Alcohol dehydrogenase; oxidoreductase, archaea, hyperthermophIle, zinc; HET: OCA NAJ; 1.62A {Aeropyrum pernix} SCOP: b.35.1.2 c.2.1.1 Length = 359

 Score =  202 bits (516), Expect = 3e-62
 Identities = 82/332 (24%), Positives = 147/332 (44%), Gaps = 25/332 (7%)

Query: 29  LKIQPFELPSL-GPYDVLVRMKAVGICGSDVHYLKTLRCADFVVKEPMVIGHECAGVIEK 87
           L+I+  + P L G +DV+VR+   G+C +D+H ++ +       K P  +GHE  G IE+
Sbjct: 28  LRIEDVDYPRLEGRFDVIVRIAGAGVCHTDLHLVQGMWHELLQPKLPYTLGHENVGYIEE 87

Query: 88  VGSEVKTLVPGDRVALEPGISCWRCDHCKGGRYNLCPEMKFFATPPVHGSLANQVVHPAD 147
           V   V+ L  GD V L P ++   C  C+ G    C  ++F     + G  A  +     
Sbjct: 88  VAEGVEGLEKGDPVILHPAVTDGTCLACRAGEDMHCENLEFPGL-NIDGGFAEFMRTSHR 146

Query: 148 LCFKLPDNVSLEEGAMCEPLS-VGL---HACRRA--NIGPETNVLIMGAGPIGLVTMLGA 201
              KLP ++S E+     PL+  G+    A ++A   + P   V I+G G +G + +   
Sbjct: 147 SVIKLPKDISREKLVEMAPLADAGITAYRAVKKAARTLYPGAYVAIVGVGGLGHIAVQLL 206

Query: 202 PRAFGAPRIVIVDVDDYRLSVAKEIGADNIVKVSTNLQDIAEEVEKIQKAMGTGIDVSFD 261
            +      ++ +DV + +L +A+ +GAD++V      +D  ++V ++ +  G G++V+ D
Sbjct: 207 -KVMTPATVIALDVKEEKLKLAERLGADHVVDAR---RDPVKQVMELTR--GRGVNVAMD 260

Query: 262 CAGLNKTMSTALGATCAGGKVCLVGMGHHEMTVPLTPAAVREVDVVGVFRYKNTW---PL 318
             G   T+          G++ +VG G  E+  P       EV   G       +     
Sbjct: 261 FVGSQATVDYTPYLLGRMGRLIIVGYG-GELRFPTIRVISSEVSFEGS--LVGNYVELHE 317

Query: 319 CLELLRSGKIDVKPLVTHRFGFSQKEVEEAFE 350
            + L   GK+    +          E+ +  E
Sbjct: 318 LVTLALQGKVR---VEVDIHKLD--EINDVLE 344

>2h6e_A ADH-4, D-arabinose 1-dehydrogenase; rossman fold, medium chain alcohol dehydrogenase, oxidoreduc; 1.80A {Sulfolobus solfataricus} Length = 344

 Score =  186 bits (474), Expect = 3e-56
 Identities = 72/333 (21%), Positives = 134/333 (40%), Gaps = 30/333 (9%)

Query: 29  LKIQPFELPSLGPYDVLVRMKAVGICGSDVHYLKTLRCADFVVKEPMVIGHECAGVIEKV 88
           L I+   +P     +VL+R+   G+C +D+   K +  A    + P+++GHE AG I +V
Sbjct: 16  LSIEDVNIPEPQGEEVLIRIGGAGVCRTDLRVWKGVE-AKQGFRLPIILGHENAGTIVEV 74

Query: 89  GSEVKTLVPGDRVALEPGISCWRCDHCKGGRYNLCPEMKFFATPPVHGSLANQVVHPADL 148
           G E+  +  GD V +        C +C+ G++N+C           +G  +  ++  +  
Sbjct: 75  G-ELAKVKKGDNVVVYATWGDLTCRYCREGKFNICKNQIIPGQT-TNGGFSEYMLVKSSR 132

Query: 149 CFKLPDNVSLEEGAMCEPLSV-GL---HACRRA----NIGPETNVLIMGAGPIGLVTMLG 200
                +++S  E A   PL+  G     A R+A    +   E  V++ G G + + T+  
Sbjct: 133 WLVKLNSLSPVEAA---PLADAGTTSMGAIRQALPFISKFAEPVVIVNGIGGLAVYTIQI 189

Query: 201 APRAFGAPRIVIVDVDDYRLSVAKEIGADNIVKVSTNLQDIAEEVEKIQKAMGTGIDVSF 260
                    IV +         A E+GAD +      ++D    + K+    G G  ++ 
Sbjct: 190 LKALMKNITIVGISRSKKHRDFALELGADYVS----EMKDAESLINKLTD--GLGASIAI 243

Query: 261 DCAGLNKTMSTALGATCAGGKVCLVGMGHHEMTVPLTPAAVREVDVVGVFRYKNTWPLCL 320
           D  G  +T           G + LVGM    +++     AV    ++G      +     
Sbjct: 244 DLVGTEETTYNLGKLLAQEGAIILVGMEGKRVSLEAFDTAVWNKKLLGS--NYGSLNDLE 301

Query: 321 ELL---RSGKIDVKPLVTHRFGFSQKEVEEAFE 350
           +++    SGKI        +      ++ +AF 
Sbjct: 302 DVVRLSESGKIKP---YIIKVPLD--DINKAFT 329

>1f8f_A Benzyl alcohol dehydrogenase; rossmann fold, oxidoreductase; HET: NAD; 2.20A {Acinetobacter calcoaceticus} SCOP: b.35.1.2 c.2.1.1 Length = 371

 Score =  182 bits (464), Expect = 2e-54
 Identities = 84/369 (22%), Positives = 143/369 (38%), Gaps = 68/369 (18%)

Query: 29  LKIQPFELPSLGPYDVLVRMKAVGICGSDVHYLKTLRCADFVVKEPMVIGHECAGVIEKV 88
            ++Q  ++      +VLV++ A G+C +D+               P V+GHE +G+IE +
Sbjct: 19  FELQALKIRQPQGDEVLVKVVATGMCHTDLIVRDQKYPVPL----PAVLGHEGSGIIEAI 74

Query: 89  GSEVKTLVPGDRVALEPGISCWRCDHCKGGRYNLCPEMK--------------------- 127
           G  V  L  GD V L  G  C +C  C  G    C E                       
Sbjct: 75  GPNVTELQVGDHVVLSYG-YCGKCTQCNTGNPAYCSEFFGRNFSGADSEGNHALCTHDQG 133

Query: 128 -----FFATPPVHGSLANQVVHPADLCFKLPDNVSLEEGAMCEPLSVGLHAC-------- 174
                FFA      S A   +   +   K+  +V +E         +G   C        
Sbjct: 134 VVNDHFFAQ----SSFATYALSRENNTVKVTKDVPIEL--------LGPLGCGIQTGAGA 181

Query: 175 --RRANIGPETNVLIMGAGPIGLVTMLGAPRAFGAPRIVIVDVDDYRLSVAKEIGADNIV 232
                 + P ++ +  GAG +GL  +L A +  GA  I+ VD+ + RL +AK++GA +++
Sbjct: 182 CINALKVTPASSFVTWGAGAVGLSALLAA-KVCGASIIIAVDIVESRLELAKQLGATHVI 240

Query: 233 KVSTNLQDIAEEVEKIQKAMGTGIDVSFDCAGLNKTMSTALGATCAGGKVCLVGMGHHEM 292
               N +   + V  I++    G++ + +  G  + +   + A    GK+ +VG      
Sbjct: 241 ----NSKT-QDPVAAIKEITDGGVNFALESTGSPEILKQGVDALGILGKIAVVGAPQLGT 295

Query: 293 TVPLTPAA--VREVDVVGVF----RYKNTWPLCLELLRSGKIDVKPLVTHRFGFSQKEVE 346
           T         +    ++GV       K   P  + L + GK     LV   + F   E+ 
Sbjct: 296 TAQFDVNDLLLGGKTILGVVEGSGSPKKFIPELVRLYQQGKFPFDQLVKF-YAFD--EIN 352

Query: 347 EAFETSARG 355
           +A   S +G
Sbjct: 353 QAAIDSRKG 361

>1e3i_A Alcohol dehydrogenase, class II; HET: NAD; 2.08A {Mus musculus} SCOP: b.35.1.2 c.2.1.1 PDB: 1e3e_A* 1e3l_A* 3cos_A* Length = 376

 Score =  168 bits (428), Expect = 4e-49
 Identities = 88/362 (24%), Positives = 152/362 (41%), Gaps = 50/362 (13%)

Query: 29  LKIQPFELPSLGPYDVLVRMKAVGICGSDVHYLKTLRCADFVVKEPMVIGHECAGVIEKV 88
           L I+  E+      +V +++ A  +C +D++              P+V+GHECAG++E V
Sbjct: 21  LCIEEIEVSPPKACEVRIQVIATCVCPTDINATD----PKKKALFPVVLGHECAGIVESV 76

Query: 89  GSEVKTLVPGDRVALEPGISCWRCDHCKGGRYNLCPEMKFFATP---------------- 132
           G  V    PGD+V       C RC  C     NLC +++ F  P                
Sbjct: 77  GPGVTNFKPGDKVIPFFAPQCKRCKLCLSPLTNLCGKLRNFKYPTIDQELMEDRTSRFTC 136

Query: 133 ---PVH-----GSLANQVVHPADLCFKLPDNVSLEEGAMCEPLSVGLH-----ACRRANI 179
               ++      S +   V       ++ D  +LE       +  G       A   A +
Sbjct: 137 KGRSIYHFMGVSSFSQYTVVSEANLARVDDEANLERVC---LIGCGFSSGYGAAINTAKV 193

Query: 180 GPETNVLIMGAGPIGLVTMLGAPRAFGAPRIVIVDVDDYRLSVAKEIGADNIVKVSTNLQ 239
            P +   + G G +GL  ++G  +  GA RI+ +D++  +   AK +GA + +    N +
Sbjct: 194 TPGSTCAVFGLGCVGLSAIIGC-KIAGASRIIAIDINGEKFPKAKALGATDCL----NPR 248

Query: 240 DIAEEV-EKIQKAMGTGIDVSFDCAGLNKTMSTALGATCAG-GKVCLVGMGHHEMTVPLT 297
           ++ + V + I +    G+D S DCAG  +T+  A+  T  G G   +VG    EMT+P  
Sbjct: 249 ELDKPVQDVITELTAGGVDYSLDCAGTAQTLKAAVDCTVLGWGSCTVVGAKVDEMTIPTV 308

Query: 298 PAAVREVDVVGVF----RYKNTWPLCLELLRSGKIDVKPLVTHRFGFSQKEVEEAFETSA 353
              +    + G F    +  ++ P  +   ++ K D+  LVTH   F    + +A +   
Sbjct: 309 D-VILGRSINGTFFGGWKSVDSVPNLVSDYKNKKFDLDLLVTHALPFE--SINDAIDLMK 365

Query: 354 RG 355
            G
Sbjct: 366 EG 367

>2fzw_A Alcohol dehydrogenase class III CHI chain; S-nitrosoglutathione reductase, glutathione-dependent formaldehyde dehydrogenase, oxidoreductase; HET: NAD; 1.84A {Homo sapiens} SCOP: b.35.1.2 c.2.1.1 PDB: 3qj5_A* 1mc5_A* 2fze_A* 1m6w_A* 1ma0_A* 1mp0_A* 1teh_A* 1m6h_A* Length = 373

 Score =  166 bits (424), Expect = 2e-48
 Identities = 93/367 (25%), Positives = 148/367 (40%), Gaps = 42/367 (11%)

Query: 20  AAWLLGVNT-LKIQPFELPSLGPYDVLVRMKAVGICGSDVHYLKTLRCADFVVKEPMVIG 78
           AA        L I+  E+     ++V +++ A  +C +D +   TL  AD     P+++G
Sbjct: 9   AAVAWEAGKPLSIEEIEVAPPKAHEVRIKIIATAVCHTDAY---TLSGADPEGCFPVILG 65

Query: 79  HECAGVIEKVGSEVKTLVPGDRVALEPGISCWRCDHCKGGRYNLCPEMKFFATP------ 132
           H  AG++E VG  V  L  GD V       C  C  C   + NLC +++           
Sbjct: 66  HLGAGIVESVGEGVTKLKAGDTVIPLYIPQCGECKFCLNPKTNLCQKIRVTQGKGLMPDG 125

Query: 133 ---------PVH-----GSLANQVVHPADLCFKLPDNVSLEEGAM--CEPLSVGLHAC-R 175
                     +       + +   V       K+     L++  +  C  +S G  A   
Sbjct: 126 TSRFTCKGKTILHYMGTSTFSEYTVVADISVAKIDPLAPLDKVCLLGCG-ISTGYGAAVN 184

Query: 176 RANIGPETNVLIMGAGPIGLVTMLGAPRAFGAPRIVIVDVDDYRLSVAKEIGADNIVKVS 235
            A + P +   + G G +GL  ++G  +  GA RI+ VD++  + + AKE GA   +   
Sbjct: 185 TAKLEPGSVCAVFGLGGVGLAVIMGC-KVAGASRIIGVDINKDKFARAKEFGATECI--- 240

Query: 236 TNLQDIAEEV-EKIQKAMGTGIDVSFDCAGLNKTMSTALGATCAG-GKVCLVGMGHHEMT 293
            N QD ++ + E + +    G+D SF+C G  K M  AL A   G G   +VG+      
Sbjct: 241 -NPQDFSKPIQEVLIEMTDGGVDYSFECIGNVKVMRAALEACHKGWGVSVVVGVAASGEE 299

Query: 294 VPLTPAA-VREVDVVGVF----RYKNTWPLCLELLRSGKIDVKPLVTHRFGFSQKEVEEA 348
           +   P   V      G      +   + P  +    S KI V   VTH   F   E+ +A
Sbjct: 300 IATRPFQLVTGRTWKGTAFGGWKSVESVPKLVSEYMSKKIKVDEFVTHNLSFD--EINKA 357

Query: 349 FETSARG 355
           FE    G
Sbjct: 358 FELMHSG 364

>1p0f_A NADP-dependent alcohol dehydrogenase; ADH topology, NADP(H)-dependent, oxidoreductase; HET: NAP; 1.80A {Rana perezi} SCOP: b.35.1.2 c.2.1.1 PDB: 1p0c_A* Length = 373

 Score =  166 bits (422), Expect = 3e-48
 Identities = 84/354 (23%), Positives = 143/354 (40%), Gaps = 48/354 (13%)

Query: 29  LKIQPFELPSLGPYDVLVRMKAVGICGSDVHYLKTLRCADFVVKEPMVIGHECAGVIEKV 88
           L ++   +     ++V +++ A GICGSD   LK         K P+++GHE  GV+E +
Sbjct: 22  LSLETITVAPPKAHEVRIKILASGICGSDSSVLK----EIIPSKFPVILGHEAVGVVESI 77

Query: 89  GSEVKTLVPGDRVALEPGISCWRCDHCKGGRYNLCPEMKFFATP---------------P 133
           G+ V  + PGD+V       C  C  CK    N C +    A                 P
Sbjct: 78  GAGVTCVKPGDKVIPLFVPQCGSCRACKSSNSNFCEKNDMGAKTGLMADMTSRFTCRGKP 137

Query: 134 VH-----GSLANQVVHPADLCFKLPDNVSLEEGAMCEPLSVGLHAC-RRANIGPETNVLI 187
           ++      +     V       K+     LE   +    + G  A    A + P +   +
Sbjct: 138 IYNLMGTSTFTEYTVVADIAVAKIDPKAPLESCLIGCGFATGYGAAVNTAKVTPGSTCAV 197

Query: 188 MGAGPIGLVTMLGAPRAFGAPRIVIVDVDDYRLSVAKEIGADNIVKVSTNLQDIAEEV-E 246
            G G +G   ++G  +A GA RI+ V     +   A E+GA   +    N +D  + + E
Sbjct: 198 FGLGGVGFSAIVGC-KAAGASRIIGVGTHKDKFPKAIELGATECL----NPKDYDKPIYE 252

Query: 247 KIQKAMGTGIDVSFDCAGLNKTMSTALGATCAG-GKVCLVGMGHHEMTVPLTPAAVREVD 305
            I +    G+D + +CAG  +TM  AL +T  G G   ++G+      +PL P     + 
Sbjct: 253 VICEKTNGGVDYAVECAGRIETMMNALQSTYCGSGVTVVLGLASPNERLPLDP-----LL 307

Query: 306 VVGVFRYKNTW---------PLCLELLRSGKIDVKPLVTHRFGFSQKEVEEAFE 350
           ++     K +             ++     KI+V  LV+ +      ++ +AFE
Sbjct: 308 LLTGRSLKGSVFGGFKGEEVSRLVDDYMKKKINVNFLVSTKLTLD--QINKAFE 359

>2dph_A Formaldehyde dismutase; dismutation of aldehydes, oxidoreductase; HET: NAD; 2.27A {Pseudomonas putida} Length = 398

 Score =  165 bits (419), Expect = 1e-47
 Identities = 78/371 (21%), Positives = 139/371 (37%), Gaps = 61/371 (16%)

Query: 41  PYDVLVRMKAVGICGSDVHYLKTLRCADFVVKEPMVIGHECAGVIEKVGSEVKTLVPGDR 100
            + V++++ +  ICGSD H  +      F+V +  V+GHE  G + + GS+V+ +  GD 
Sbjct: 32  EHAVILKVVSTNICGSDQHIYR----GRFIVPKGHVLGHEITGEVVEKGSDVELMDIGDL 87

Query: 101 VALEPGISCWRCDHCKGGRYNLCPEMKF----------FATPPVHGSLANQV-VHPADL- 148
           V++   ++C RC +CK  R ++C               F      G  A  V V  AD  
Sbjct: 88  VSVPFNVACGRCRNCKEARSDVCENNLVNPDADLGAFGFDLKGWSGGQAEYVLVPYADYM 147

Query: 149 CFKLPDNVSLEEG-----AMCEPLSVGLHACRRANIGPETNVLIMGAGPIGLVTMLGAPR 203
             K  D     E       + + L  G H C  A + P ++V I GAGP+G     GA R
Sbjct: 148 LLKFGDKEQAMEKIKDLTLISDILPTGFHGCVSAGVKPGSHVYIAGAGPVGRCAAAGA-R 206

Query: 204 AFGAPRIVIVDVDDYRLSVAKEIGADNIVKVSTNLQDIAEEVEKIQKAM-GTGIDVSFDC 262
             GA  +++ D +  RL +  + G + I     +L++ A   ++I + +    +D   D 
Sbjct: 207 LLGAACVIVGDQNPERLKLLSDAGFETI-----DLRNSAPLRDQIDQILGKPEVDCGVDA 261

Query: 263 AGL--------------NKTMSTALGATCAGGKVCLVGMGHHEMTVPLTPAAVREVDVV- 307
            G               N  +++      AGG + + G+       P+   A      + 
Sbjct: 262 VGFEAHGLGDEANTETPNGALNSLFDVVRAGGAIGIPGIYVGSDPDPVNKDAGSGRLHLD 321

Query: 308 -GVFRYKN------------TWPLCLELLRSGKIDVKP--LVTHRFGFSQKEVEEAFETS 352
            G    K+                  E +   ++      +          +  + +   
Sbjct: 322 FGKMWTKSIRIMTGMAPVTNYNRHLTEAILWDQMPYLSKVMNIEVITLD--QAPDGYAKF 379

Query: 353 ARGGTAIKVMF 363
            +G    K + 
Sbjct: 380 DKGS-PAKFVI 389

>2jhf_A Alcohol dehydrogenase E chain; oxidoreductase, metal coordination, NAD, zinc, inhibition, acetylation, metal-binding; HET: NAD; 1.0A {Equus caballus} SCOP: b.35.1.2 c.2.1.1 PDB: 1adc_A* 1adf_A* 1adg_A* 1adb_A* 1bto_A* 1heu_A* 1hf3_A* 1hld_A* 1lde_A* 1ldy_A* 1mg0_A* 1n92_A* 1p1r_A* 1ye3_A 1het_A* 2jhg_A* 2ohx_A* 2oxi_A* 3bto_A* 4dwv_A* ... Length = 374

 Score =  164 bits (417), Expect = 1e-47
 Identities = 92/362 (25%), Positives = 150/362 (41%), Gaps = 43/362 (11%)

Query: 20  AAWLLGVNT-LKIQPFELPSLGPYDVLVRMKAVGICGSDVHYLKTLRCADFVVKEPMVIG 78
           AA L        I+  E+     ++V ++M A GIC SD H +        V   P++ G
Sbjct: 11  AAVLWEEKKPFSIEEVEVAPPKAHEVRIKMVATGICRSDDHVVS----GTLVTPLPVIAG 66

Query: 79  HECAGVIEKVGSEVKTLVPGDRVALEPGISCWRCDHCKGGRYNLCPEMKFFATP------ 132
           HE AG++E +G  V T+ PGD+V       C +C  CK    N C +             
Sbjct: 67  HEAAGIVESIGEGVTTVRPGDKVIPLFTPQCGKCRVCKHPEGNFCLKNDLSMPRGTMQDG 126

Query: 133 ---------PVH-----GSLANQVVHPADLCFKLPDNVSLEEGAM--CEPLSVGLHAC-R 175
                    P+H      + +   V       K+     LE+  +  C   S G  +  +
Sbjct: 127 TSRFTCRGKPIHHFLGTSTFSQYTVVDEISVAKIDAASPLEKVCLIGCG-FSTGYGSAVK 185

Query: 176 RANIGPETNVLIMGAGPIGLVTMLGAPRAFGAPRIVIVDVDDYRLSVAKEIGADNIVKVS 235
            A +   +   + G G +GL  ++G  +A GA RI+ VD++  + + AKE+GA   V   
Sbjct: 186 VAKVTQGSTCAVFGLGGVGLSVIMGC-KAAGAARIIGVDINKDKFAKAKEVGATECV--- 241

Query: 236 TNLQDIAEEV-EKIQKAMGTGIDVSFDCAGLNKTMSTALGATCAG-GKVCLVGMGHHEMT 293
            N QD  + + E + +    G+D SF+  G   TM TAL       G   +VG+      
Sbjct: 242 -NPQDYKKPIQEVLTEMSNGGVDFSFEVIGRLDTMVTALSCCQEAYGVSVIVGVPPDSQN 300

Query: 294 VPLTPAA-VREVDVVGVF----RYKNTWPLCLELLRSGKIDVKPLVTHRFGFSQKEVEEA 348
           + + P   +      G      + K++ P  +    + K  + PL+TH   F   ++ E 
Sbjct: 301 LSMNPMLLLSGRTWKGAIFGGFKSKDSVPKLVADFMAKKFALDPLITHVLPFE--KINEG 358

Query: 349 FE 350
           F+
Sbjct: 359 FD 360

>1kol_A Formaldehyde dehydrogenase; oxidoreductase; HET: NAD; 1.65A {Pseudomonas putida} SCOP: b.35.1.2 c.2.1.1 Length = 398

 Score =  162 bits (413), Expect = 1e-46
 Identities = 72/372 (19%), Positives = 136/372 (36%), Gaps = 64/372 (17%)

Query: 41  PYDVLVRMKAVGICGSDVHYLKTLRCADFVVKEPMVIGHECAGVIEKVGSEVKTLVPGDR 100
            + V++++ +  ICGSD H ++         +  +V+GHE  G + + G +V+ L  GD 
Sbjct: 33  EHGVILKVVSTNICGSDQHMVR----GRTTAQVGLVLGHEITGEVIEKGRDVENLQIGDL 88

Query: 101 VALEPGISCWRCDHCKGGRYNLCPEMK---------FFATPPVHGSLANQVVHP-ADL-C 149
           V++   ++C RC  CK     +C  +          +       G  A  V+ P AD   
Sbjct: 89  VSVPFNVACGRCRSCKEMHTGVCLTVNPARAGGAYGYVDMGDWTGGQAEYVLVPYADFNL 148

Query: 150 FKLPDNVSLEEG-----AMCEPLSVGLHACRRANIGPETNVLIMGAGPIGLVTMLGAPRA 204
            KLPD     E       + + L  G H    A +GP + V + GAGP+GL     A R 
Sbjct: 149 LKLPDRDKAMEKIRDLTCLSDILPTGYHGAVTAGVGPGSTVYVAGAGPVGLAAAASA-RL 207

Query: 205 FGAPRIVIVDVDDYRLSVAKEIGADNIVKVSTNLQDIAEEVEKIQKAMGTGIDVSFDCAG 264
            GA  +++ D++  RL+ AK  G +      +    + E++  +       +D + D  G
Sbjct: 208 LGAAVVIVGDLNPARLAHAKAQGFEIA--DLSLDTPLHEQIAALLG--EPEVDCAVDAVG 263

Query: 265 L---------------NKTMSTALGATCAGGKVCLVG-------------MGHHEMTVPL 296
                              +++ +  T   GK+ + G                  +++  
Sbjct: 264 FEARGHGHEGAKHEAPATVLNSLMQVTRVAGKIGIPGLYVTEDPGAVDAAAKIGSLSIRF 323

Query: 297 TPAAVREVDVVG----VFRYKNTWPLCLELLRSGKIDVKPLV-THRFGFSQKEVEEAFET 351
                +          V +Y       ++ +   +I++  +V          +    +  
Sbjct: 324 GLGWAKSHSFHTGQTPVMKY---NRALMQAIMWDRINIAEVVGVQVISLD--DAPRGYGE 378

Query: 352 SARGGTAIKVMF 363
               G   K + 
Sbjct: 379 FDA-GVPKKFVI 389

>1cdo_A Alcohol dehydrogenase; oxidoreductase, oxidoreductase (CH-OH(D)-NAD(A)); HET: NAD; 2.05A {Gadus callarias} SCOP: b.35.1.2 c.2.1.1 Length = 374

 Score =  158 bits (401), Expect = 3e-45
 Identities = 89/366 (24%), Positives = 147/366 (40%), Gaps = 41/366 (11%)

Query: 20  AAWLLGVNT-LKIQPFELPSLGPYDVLVRMKAVGICGSDVHYLKTLRCADFVVKEPMVIG 78
           AA     N  L I+  E+      ++ +++ A G+C +D++    L         P+V+G
Sbjct: 11  AAVAWEANKPLVIEEIEVDVPHANEIRIKIIATGVCHTDLY---HLFEGKHKDGFPVVLG 67

Query: 79  HECAGVIEKVGSEVKTLVPGDRVALEPGISCWRCDHCKGGRYNLCPEMKFFATP------ 132
           HE AG++E VG  V    PG++V       C  C  C+  + N C +     +P      
Sbjct: 68  HEGAGIVESVGPGVTEFQPGEKVIPLFISQCGECRFCQSPKTNQCVKGWANESPDVMSPK 127

Query: 133 ---------PVH-----GSLANQVVHPADLCFKLPDNVSLEEGAM--CEPLSVGLHAC-R 175
                     V       + +   V       K+  +  L+   +  C  +S G  A   
Sbjct: 128 ETRFTCKGRKVLQFLGTSTFSQYTVVNQIAVAKIDPSAPLDTVCLLGCG-VSTGFGAAVN 186

Query: 176 RANIGPETNVLIMGAGPIGLVTMLGAPRAFGAPRIVIVDVDDYRLSVAKEIGADNIVKVS 235
            A + P +   + G G +GL  ++G   + GA RI+ VD++  +   AK  GA + V   
Sbjct: 187 TAKVEPGSTCAVFGLGAVGLAAVMGC-HSAGAKRIIAVDLNPDKFEKAKVFGATDFV--- 242

Query: 236 TNLQDIAEEV-EKIQKAMGTGIDVSFDCAGLNKTMSTALGATCAG-GKVCLVGMGHHEM- 292
            N  D +E + + + K    G+D S +C G    M  AL +   G G   LVG       
Sbjct: 243 -NPNDHSEPISQVLSKMTNGGVDFSLECVGNVGVMRNALESCLKGWGVSVLVGWTDLHDV 301

Query: 293 -TVPLTPAAVREVD--VVGVFRYKNTWPLCLELLRSGKIDVKPLVTHRFGFSQKEVEEAF 349
            T P+   A R     + G F+ K+  P  ++     K+ +   +THR       V +A 
Sbjct: 302 ATRPIQLIAGRTWKGSMFGGFKGKDGVPKMVKAYLDKKVKLDEFITHRMPLE--SVNDAI 359

Query: 350 ETSARG 355
           +    G
Sbjct: 360 DLMKHG 365

>3s2e_A Zinc-containing alcohol dehydrogenase superfamily; FURX, oxidoreductase; HET: NAD; 1.76A {Ralstonia eutropha} PDB: 3s1l_A* 3s2f_A* 3s2g_A* 3s2i_A* 1llu_A* 3meq_A* Length = 340

 Score =  155 bits (394), Expect = 1e-44
 Identities = 84/293 (28%), Positives = 130/293 (44%), Gaps = 33/293 (11%)

Query: 29  LKIQPFELPSLGPYDVLVRMKAVGICGSDVHYLKTLRCADF--VVKEPMVIGHECAGVIE 86
           L I    +P  GP  V V+++A G+C +D+H        D+      P + GHE  G + 
Sbjct: 15  LTIDEVPVPQPGPGQVQVKIEASGVCHTDLHAAD----GDWPVKPTLPFIPGHEGVGYVS 70

Query: 87  KVGSEVKTLVPGDRVALEPGI-----SCWRCDHCKGGRYNLCPEMKFFATPPVHGSLANQ 141
            VGS V  +  GDRV    G+     +C  C+HC  G   LC + +      V+G     
Sbjct: 71  AVGSGVSRVKEGDRV----GVPWLYSACGYCEHCLQGWETLCEKQQ-NTGYSVNGGYGEY 125

Query: 142 VVHPADLCFKLPDNVSLEEGA--MCEPLSVGL---HACRRANIGPETNVLIMGAGPIGLV 196
           VV   +    LPD V   E A  +C     G+      +  +  P   V+I G G +G V
Sbjct: 126 VVADPNYVGLLPDKVGFVEIAPILC----AGVTVYKGLKVTDTRPGQWVVISGIGGLGHV 181

Query: 197 TMLGAPRAFGAPRIVIVDVDDYRLSVAKEIGADNIVKVSTNLQDIAEEVEKIQKAMGTGI 256
            +  A RA G  R+  VD+DD +L++A+ +GA+  V  + +  D A     +QK +G G 
Sbjct: 182 AVQYA-RAMGL-RVAAVDIDDAKLNLARRLGAEVAV-NARD-TDPAAW---LQKEIG-GA 233

Query: 257 DVSFDCAGLNKTMSTALGATCAGGKVCLVGMGHHEMTVPLTPAAVREVDVVGV 309
                 A   K  S A+G    GG + L G+   +   P+    ++ + + G 
Sbjct: 234 HGVLVTAVSPKAFSQAIGMVRRGGTIALNGLPPGDFGTPIFDVVLKGITIRGS 286

>1rjw_A ADH-HT, alcohol dehydrogenase; oxidoreductase, NAD, zinc, tetramer; 2.35A {Geobacillus stearothermophilus} SCOP: b.35.1.2 c.2.1.1 PDB: 3pii_A Length = 339

 Score =  151 bits (385), Expect = 3e-43
 Identities = 95/292 (32%), Positives = 142/292 (48%), Gaps = 33/292 (11%)

Query: 29  LKIQPFELPSLGPYDVLVRMKAVGICGSDVHYLKTLRCADF--VVKEPMVIGHECAGVIE 86
           LKI+  E P++   +VLVR+KA G+C +D+H        D+    K P++ GHE  G++E
Sbjct: 13  LKIKEVEKPTISYGEVLVRIKACGVCHTDLHAAH----GDWPVKPKLPLIPGHEGVGIVE 68

Query: 87  KVGSEVKTLVPGDRVALEPGI-----SCWRCDHCKGGRYNLCPEMKFFATPPVHGSLANQ 141
           +VG  V  L  GDRV    GI     +C  CD+C  G+  LC   K  A   V G  A  
Sbjct: 69  EVGPGVTHLKVGDRV----GIPWLYSACGHCDYCLSGQETLCEHQK-NAGYSVDGGYAEY 123

Query: 142 VVHPADLCFKLPDNVSLEEGA--MCEPLSVGL---HACRRANIGPETNVLIMGAGPIGLV 196
               AD   K+PDN+S EE A   C     G+    A +     P   V I G G +G V
Sbjct: 124 CRAAADYVVKIPDNLSFEEAAPIFC----AGVTTYKALKVTGAKPGEWVAIYGIGGLGHV 179

Query: 197 TMLGAPRAFGAPRIVIVDVDDYRLSVAKEIGADNIVKVSTNLQDIAEEVEKIQKAMGTGI 256
            +  A +A G   +V VD+ D +L +AKE+GAD +V      +D A+    +++ +G G+
Sbjct: 180 AVQYA-KAMGL-NVVAVDIGDEKLELAKELGADLVV-NPLK-EDAAKF---MKEKVG-GV 231

Query: 257 DVSFDCAGLNKTMSTALGATCAGGKVCLVGMGHHEMTVPLTPAAVREVDVVG 308
             +   A       +A  +   GG   LVG+   EM +P+    +  + ++G
Sbjct: 232 HAAVVTAVSKPAFQSAYNSIRRGGACVLVGLPPEEMPIPIFDTVLNGIKIIG 283

>2hcy_A Alcohol dehydrogenase 1; tetramer of asymmetric dimers, zinc coordination, intramolec disulfide bonds, oxidoreductase; HET: 8ID; 2.44A {Saccharomyces cerevisiae} Length = 347

 Score =  147 bits (374), Expect = 1e-41
 Identities = 71/299 (23%), Positives = 118/299 (39%), Gaps = 43/299 (14%)

Query: 29  LKIQPFELPSLGPYDVLVRMKAVGICGSDVHYLKTLRCADF--VVKEPMVIGHECAGVIE 86
           L+ +   +P     ++L+ +K  G+C +D+H        D+   VK P+V GHE AGV+ 
Sbjct: 18  LEYKDIPVPKPKANELLINVKYSGVCHTDLHAWH----GDWPLPVKLPLVGGHEGAGVVV 73

Query: 87  KVGSEVKTLVPGDRVALEPGI-----SCWRCDHCKGGRYNLCPEMKFFATPPVHGSLANQ 141
            +G  VK    GD      GI     SC  C++C+ G  + CP     +     GS    
Sbjct: 74  GMGENVKGWKIGDYA----GIKWLNGSCMACEYCELGNESNCPHAD-LSGYTHDGSFQQY 128

Query: 142 VVHPADLCFKLPDNVSLEEGA--MC------EPLSVGLHACRRANIGPETNVLIMGAGPI 193
               A     +P    L + A  +C      + L       + AN+     V I GA   
Sbjct: 129 ATADAVQAAHIPQGTDLAQVAPILCAGITVYKAL-------KSANLMAGHWVAISGAAG- 180

Query: 194 GLVTM---LGAPRAFGAPRIVIVDVDDYRLSVAKEIGADNIVKVSTNLQDIAEEVEKIQK 250
           GL ++       +A G  R++ +D  + +  + + IG +  +   T  +DI   V    K
Sbjct: 181 GLGSLAVQYA--KAMGY-RVLGIDGGEGKEELFRSIGGEVFI-DFTKEKDIVGAV---LK 233

Query: 251 AMGTGIDVSFDCAGLNKTMSTALGATCAGGKVCLVGM-GHHEMTVPLTPAAVREVDVVG 308
           A   G     + +     +  +     A G   LVGM    +    +    V+ + +VG
Sbjct: 234 ATDGGAHGVINVSVSEAAIEASTRYVRANGTTVLVGMPAGAKCCSDVFNQVVKSISIVG 292

>2eih_A Alcohol dehydrogenase; zinc ION binding protein, structural genomics, NPPSFA, natio project on protein structural and functional analyses; 2.30A {Thermus thermophilus} Length = 343

 Score =  146 bits (370), Expect = 6e-41
 Identities = 98/343 (28%), Positives = 149/343 (43%), Gaps = 27/343 (7%)

Query: 19  MAAWLL----GVNTLKIQPFELPSLGPYDVLVRMKAVGICGSDVHYLKTLRCADFVVKEP 74
           M A ++    G   L++    +P  GP +V VR+KA  +   DV   K +      +  P
Sbjct: 1   MRAVVMRARGGPEVLEVADLPVPEPGPKEVRVRLKAAALNHLDVWVRKGVASPK--LPLP 58

Query: 75  MVIGHECAGVIEKVGSEVKTLVPGDRVALEPGISCWRCDHCKGGRYNLCPEMKFFATPPV 134
            V+G + +GV++ VG  V+   PGD V + PG+SC RC+ C  G  NLCP  +       
Sbjct: 59  HVLGADGSGVVDAVGPGVEGFAPGDEVVINPGLSCGRCERCLAGEDNLCPRYQILGEHR- 117

Query: 135 HGSLANQVVHPADLCFKLPDNVSLEEGAMCEPLSVGL---HA-CRRANIGPETNVLIMGA 190
           HG+ A  VV P       P N+S EE A   PL   L        +  + P  +VL+M A
Sbjct: 118 HGTYAEYVVLPEANLAPKPKNLSFEEAA-AIPL-TFLTAWQMVVDKLGVRPGDDVLVMAA 175

Query: 191 -GPIGLVTMLGAPRAFGAPRIVIVDVDDYRLSVAKEIGADNIVKVSTNLQDIAEEVEKIQ 249
              + +  +  A + FGA  I     +D +L  AK +GAD  V  +    D  +EV ++ 
Sbjct: 176 GSGVSVAAIQIA-KLFGARVIATAGSED-KLRRAKALGADETVNYTH--PDWPKEVRRLT 231

Query: 250 KAMGTGIDVSFDCAGLNKTMSTALGATCAGGKVCLVG-MGHHEMTVPLTPAAVREVDVVG 308
              G G D   D  G        + AT  GG++ + G    +E T+P      R++ ++G
Sbjct: 232 G--GKGADKVVDHTG-ALYFEGVIKATANGGRIAIAGASSGYEGTLPFAHVFYRQLSILG 288

Query: 309 VF-RYKNTWPLCLELLRSGKIDVKPLVTHRFGFSQKEVEEAFE 350
                K+     L  +  GK+  KP+V            E   
Sbjct: 289 STMASKSRLFPILRFVEEGKL--KPVVGQVLPLE--AAAEGHR 327

>3uog_A Alcohol dehydrogenase; structural genomics, protein structure initiative, PSI-biolo YORK structural genomics research consortium; 2.20A {Sinorhizobium meliloti 1021} Length = 363

 Score =  143 bits (364), Expect = 7e-40
 Identities = 79/351 (22%), Positives = 132/351 (37%), Gaps = 38/351 (10%)

Query: 19  MAAWLL---GVNTLKIQPFELPSLGPYDVLVRMKAVGICGSDV-----HYLKTLRCADFV 70
           M  W       + LK+    +P  G +D++VR  AV +   D                  
Sbjct: 28  MQEWSTETVAPHDLKLAERPVPEAGEHDIIVRTLAVSLNYRDKLVLETGM-------GLD 80

Query: 71  VKEPMVIGHECAGVIEKVGSEVKTLVPGDRVALEPGISCWRCDHCKGGRYNLCPEMKFFA 130
           +  P V   + +GV+E VG  V    PGDRV                GR           
Sbjct: 81  LAFPFVPASDMSGVVEAVGKSVTRFRPGDRVISTFAPGWLDGLRPGTGR----TPAYETL 136

Query: 131 TPPVHGSLANQVVHPADLCFKLPDNVSLEEGAMCEPLSVGL---HA-CRRANIGPETNVL 186
                G L+  VV P       P ++   E +   P   GL    A   + ++     V+
Sbjct: 137 GGAHPGVLSEYVVLPEGWFVAAPKSLDAAEAS-TLPC-AGLTAWFALVEKGHLRAGDRVV 194

Query: 187 IMGAGPIGLVTMLGAPRAFGAPRIVIVDVDDYRLSVAKEIGADNIVKVSTNLQDIAEEVE 246
           + G G + L  +  A +A GA  IV     + +L  A  +GAD+ +      +D  E V 
Sbjct: 195 VQGTGGVALFGLQIA-KATGAEVIVTSSSRE-KLDRAFALGADHGINRLE--EDWVERVY 250

Query: 247 KIQKAMGTGIDVSFDCAGLNKTMSTALGATCAGGKVCLVG-MGHHEMTVPLTPAAVREVD 305
            +      G D   + AG    +  +L A    G++ ++G +   E++ P+ P  ++   
Sbjct: 251 ALTG--DRGADHILEIAG-GAGLGQSLKAVAPDGRISVIGVLEGFEVSGPVGPLLLKSPV 307

Query: 306 VVGVF-RYKNTWPLCLELLRSGKIDVKPLVTHRFGFSQKEVEEAFETSARG 355
           V G+   ++      +  +    +  KP++  R+ F+  EV EA     RG
Sbjct: 308 VQGISVGHRRALEDLVGAVDRLGL--KPVIDMRYKFT--EVPEALAHLDRG 354

>4a0s_A Octenoyl-COA reductase/carboxylase; oxidoreductase, transferase, cinnabaramide PKS biosynthesis; HET: CO8 NAP; 1.90A {Streptomyces SP} PDB: 4a10_A Length = 447

 Score =  144 bits (366), Expect = 1e-39
 Identities = 71/363 (19%), Positives = 126/363 (34%), Gaps = 47/363 (12%)

Query: 25  GVNTLKIQPFELPSLGPYDVLVRMKAVGICGSDVHYLKTLRCADFVVKE----------- 73
              +L++    +P L P +VLV + A  I  + V          F   +           
Sbjct: 46  VRKSLRLGEVPMPELAPDEVLVAVMASSINYNTVWSAMFEPIPTFHFLKQNARQGGWATR 105

Query: 74  ----PMVIGHECAGVIEKVGSEVKTLVPGDRVALEPGISCWRCDHCKGGRYNLCPEMKFF 129
                 V+G +C+GV+ + G  V+   PGD V + P       +    G   L  E + +
Sbjct: 106 HDQPYHVLGSDCSGVVVRTGIGVRRWKPGDHVIVHPAH-VDEQEPATHGDGMLGTEQRAW 164

Query: 130 ATPPVHGSLANQVVHPADLCFKLPDNVSLEEGAMCEPLSVG-----LHACRRANIGPETN 184
                 G LA   V  A      P +++ EE A   PL  G     L + R A +     
Sbjct: 165 GFETNFGGLAEYGVVRASQLLPKPAHLTWEEAA-VSPLCAGTAYRMLVSDRGAQMKQGDI 223

Query: 185 VLIMGA-GPIGLVTMLGAPRAFGAPRIVIVDVDDYRLSVAKEIGADNIV----------- 232
           VLI GA G +G   +    +  G   + +V     + +  + +G D ++           
Sbjct: 224 VLIWGASGGLGSYAIQFV-KNGGGIPVAVVSSAQ-KEAAVRALGCDLVINRAELGITDDI 281

Query: 233 --KVSTNLQDIAEEVEKIQKAMGTGIDVSFDCAGLNKTMSTALGATCAGGKVCLVG-MGH 289
                  ++   +  + + +  G   D+ F+  G   T   ++     GG V   G    
Sbjct: 282 ADDPRRVVETGRKLAKLVVEKAGREPDIVFEHTG-RVTFGLSVIVARRGGTVVTCGSSSG 340

Query: 290 HEMTVPLTPAAVREVDVVGVF--RYKNTWPLCLELLRSGKIDVKPLVTHRFGFSQKEVEE 347
           +  T       ++   +VG     ++        L  SG +   P ++  +  +  E  E
Sbjct: 341 YLHTFDNRYLWMKLKKIVGSHGANHEEQQAT-NRLFESGAV--VPAMSAVYPLA--EAAE 395

Query: 348 AFE 350
           A  
Sbjct: 396 ACR 398

>3krt_A Crotonyl COA reductase; structural genomics, protein structure initiative, NYSGXRC, PSI-2; 2.19A {Streptomyces coelicolor} PDB: 3hzz_A Length = 456

 Score =  143 bits (362), Expect = 5e-39
 Identities = 75/382 (19%), Positives = 131/382 (34%), Gaps = 58/382 (15%)

Query: 14  GEEVNMAAWLL-----GVNTLKIQPFELPSLGPYDVLVRMKAVGICGSDV---------- 58
            +E  M A L         ++ +    +P LGP + LV + A  +  + V          
Sbjct: 38  KDETEMFAGLETRDKDPRKSIHLDDVPVPELGPGEALVAVMASSVNYNSVHTSIFEPLST 97

Query: 59  --HYLKTLRCADFVVKEPM---VIGHECAGVIEKVGSEVKTLVPGDRVALEPGISCWRCD 113
                +  R +D   +  +   VIG + AGV+ + G  V     GD V      S     
Sbjct: 98  FGFLERYGRVSDLAKRHDLPYHVIGSDLAGVVLRTGPGVNAWQAGDEVVAHCL-SVELES 156

Query: 114 HCKGGRYNLCPEMKFFATPPVHGSLANQVVHPADLCFKLPDNVSLEEGAMCEPLSVG--- 170
                   L PE + +      G LA   +  ++     PD++S EE A    L      
Sbjct: 157 SDGHNDTMLDPEQRIWGFETNFGGLAEIALVKSNQLMPKPDHLSWEEAA-APGLVNSTAY 215

Query: 171 --LHACRRANIGPETNVLIMGA-GPIGLVTMLGAPRAFGAPRIVIVDV-DDYRLSVAKEI 226
             L +   A +    NVLI GA G +G      A  A GA    I  V    +  + + +
Sbjct: 216 RQLVSRNGAGMKQGDNVLIWGASGGLGSYATQFA-LAGGA--NPICVVSSPQKAEICRAM 272

Query: 227 GADNIV---------------KVSTNLQDIAEEVEKIQKAMGTGIDVSFDCAGLNKTMST 271
           GA+ I+               +     +   + + ++    G  ID+ F+  G  +T   
Sbjct: 273 GAEAIIDRNAEGYRFWKDENTQDPKEWKRFGKRIRELTG--GEDIDIVFEHPG-RETFGA 329

Query: 272 ALGATCAGGKVCLVG-MGHHEMTVPLTPAAVREVDVVGVF--RYKNTWPLCLELLRSGKI 328
           ++  T  GG +        +          +    ++G     Y+  W     L+  G+I
Sbjct: 330 SVFVTRKGGTITTCASTSGYMHEYDNRYLWMSLKRIIGSHFANYREAWEA-NRLIAKGRI 388

Query: 329 DVKPLVTHRFGFSQKEVEEAFE 350
              P ++  +     +  +A  
Sbjct: 389 --HPTLSKVYSLE--DTGQAAY 406

>1zsy_A Mitochondrial 2-enoyl thioester reductase; medium-chain dehydrogenase/reductase, oxidoreductase, 2-ENOY thioester reductase; 1.75A {Homo sapiens} PDB: 2vcy_A Length = 357

 Score =  130 bits (328), Expect = 8e-35
 Identities = 59/362 (16%), Positives = 119/362 (32%), Gaps = 71/362 (19%)

Query: 29  LKIQPFELPSLGPYDVLVRMKAVGICGSDVHYLKTLRCAD---FVVKEPMVIGHECAGVI 85
           ++++  EL ++   DV V+M A  I  SD+              + + P V G+E    +
Sbjct: 42  VELKNLELAAVRGSDVRVKMLAAPINPSDI-----NMIQGNYGLLPELPAVGGNEGVAQV 96

Query: 86  EKVGSEVKTLVPGDRVALEPGISCWRCDHCKGGRYNLCPEMKFFATPPVHGSLANQVVHP 145
             VGS V  L PGD V                                  G+   + V  
Sbjct: 97  VAVGSNVTGLKPGDWVI---------------------------PANAGLGTWRTEAVFS 129

Query: 146 ADLCFKLPDNVSLEEGAMCEPLSV----GLHAC-RRANIGPETNVLIMGA-GPIGL-VTM 198
            +   ++P ++ L+  A    L V              + P  +V+   +   +G  V  
Sbjct: 130 EEALIQVPSDIPLQSAAT---LGVNPCTAYRMLMDFEQLQPGDSVIQNASNSGVGQAVIQ 186

Query: 199 LGAPRAFGAPRIVIV---DVDDYRLSVAKEIGADNIVKVSTNLQDIAEEVEKIQKAMGTG 255
           +    A G   I +V             K +GA++++          E     +      
Sbjct: 187 IA--AALGLRTINVVRDRPDIQKLSDRLKSLGAEHVITEEE--LRRPEMKNFFKD--MPQ 240

Query: 256 IDVSFDCAGLNKTMSTALGATCAGGKVCLVG-MGHHEMTVPLTPAAVREVDVVGVF---- 310
             ++ +C G  K+ +  L     GG +   G M    +   ++    +++ + G +    
Sbjct: 241 PRLALNCVG-GKSSTELLRQLARGGTMVTYGGMAKQPVVASVSLLIFKDLKLRGFWLSQW 299

Query: 311 -------RYKNTWPLCLELLRSGKIDVKPLVTHRFGFSQKEVEEAFETSARGGTAIKVMF 363
                  ++K       +L+R G++        +      + + A E S +   + K + 
Sbjct: 300 KKDHSPDQFKELILTLCDLIRRGQL--TAPACSQVPLQ--DYQSALEASMKPFISSKQIL 355

Query: 364 NL 365
            +
Sbjct: 356 TM 357

>1gu7_A Enoyl-[acyl-carrier-protein] reductase [NADPH, B-specific] 1,mitochondrial; oxidoreductase, thioester reduction, fatty acids; 1.70A {Candida tropicalis} SCOP: b.35.1.2 c.2.1.1 PDB: 1guf_A* 1n9g_B* 1n9g_A* 1gyr_A 1h0k_A Length = 364

 Score =  126 bits (318), Expect = 2e-33
 Identities = 55/380 (14%), Positives = 117/380 (30%), Gaps = 77/380 (20%)

Query: 26  VNTLKIQPFELPSLGPYDVLVRMKAVGICGSDVHYLK-------TLRCADFVVKEPMVIG 78
           V   +    +  +L P +V+V+     +  SD++ ++                +     G
Sbjct: 18  VLFTQSFEIDDDNLAPNEVIVKTLGSPVNPSDINQIQGVYPSKPAKTTGFGTTEPAAPCG 77

Query: 79  HECAGVIEKVGSEVKTLVPGDRVALEPGISCWRCDHCKGGRYNLCPEMKFFATPPVHGSL 138
           +E    + KVGS V +L  GD V                             +    G+ 
Sbjct: 78  NEGLFEVIKVGSNVSSLEAGDWVI---------------------------PSHVNFGTW 110

Query: 139 ANQVVHPADLCFKL-----------PDNVSLEEGAMCEPLSV----GLHAC-RRANIGPE 182
               +   D   KL           P+ +++ +GA    +SV              + P 
Sbjct: 111 RTHALGNDDDFIKLPNPAQSKANGKPNGLTINQGAT---ISVNPLTAYLMLTHYVKLTPG 167

Query: 183 TNVLIMGA--GPIGL-VTMLGAPRAFGAPRIVIV---DVDDYRLSVAKEIGADNIVKVST 236
            +  I       +G   + +G  +      I ++      D  ++  KE+GA  ++    
Sbjct: 168 KDWFIQNGGTSAVGKYASQIG--KLLNFNSISVIRDRPNLDEVVASLKELGATQVITEDQ 225

Query: 237 -NLQDIAEEVEKIQKAMGTGIDVSFDCAGLNKTMSTALGATCAGGKVCLVG-MGHHEMTV 294
            N ++    +++  K  G    ++ +C G  K+ +         G +   G M    +T+
Sbjct: 226 NNSREFGPTIKEWIKQSGGEAKLALNCVG-GKSSTGIARKLNNNGLMLTYGGMSFQPVTI 284

Query: 295 PLTPAAVREVDVVGVF----------RYKNTWPLCLELLRSGKIDVKPLVTHRFGFSQ-K 343
           P +    +     G +             +T    +     GK+      +    +   K
Sbjct: 285 PTSLYIFKNFTSAGFWVTELLKNNKELKTSTLNQIIAWYEEGKL--TDAKSIETLYDGTK 342

Query: 344 EVEEAFETSARGGTAIKVMF 363
            + E ++         K + 
Sbjct: 343 PLHELYQDGVANSKDGKQLI 362

>1piw_A Hypothetical zinc-type alcohol dehydrogenase- like protein in PRE5-FET4 intergenic...; ADH topology, NADP(H)dependent, oxidoreductase; HET: NAP; 3.00A {Saccharomyces cerevisiae} SCOP: b.35.1.2 c.2.1.1 PDB: 1ps0_A* 1q1n_A Length = 360

 Score =  116 bits (293), Expect = 9e-30
 Identities = 71/296 (23%), Positives = 118/296 (39%), Gaps = 46/296 (15%)

Query: 25  GVNTLKIQPFELPSLGPYDVLVRMKAVGICGSDVHYLKTLRCADFVVKEPMVIGHECAGV 84
                K   ++      +D+ ++++A G+CGSD+H           +K P+V+GHE  G 
Sbjct: 17  DWKNPKKTKYDPKPFYDHDIDIKIEACGVCGSDIH---CAAGHWGNMKMPLVVGHEIVGK 73

Query: 85  IEKVGSEVKTLV-PGDRVALEPGI-----SCWRCDHCKGGRYNLCPEMKF-FATPPVHGS 137
           + K+G +  + +  G RV    G+     SC  CD CK      C +    ++ P   G 
Sbjct: 74  VVKLGPKSNSGLKVGQRV----GVGAQVFSCLECDRCKNDNEPYCTKFVTTYSQPYEDGY 129

Query: 138 L-----ANQVVHPADLCFKLPDNVSLEEGA--MC------EPLSVGLHACRRANIGPETN 184
           +     AN V         +P+N+     A  +C       PL        R   GP   
Sbjct: 130 VSQGGYANYVRVHEHFVVPIPENIPSHLAAPLLCGGLTVYSPL-------VRNGCGPGKK 182

Query: 185 VLIMGAGPIGLVTMLGAPRAFGAPRIVIVDVDDYRLSVAKEIGADNIVKVSTNLQDIAEE 244
           V I+G G IG +  L + +A GA   VI      R   A ++GAD+ +  +       EE
Sbjct: 183 VGIVGLGGIGSMGTLIS-KAMGAETYVISRSSRKR-EDAMKMGADHYI-ATL------EE 233

Query: 245 VEKIQKAMGTGIDVSFDC--AGLNKTMSTALGATCAGGKVCLVGMGHHEMTVPLTP 298
            +  +K   T  D+   C  +  +   +    A   GG++  + +      + L P
Sbjct: 234 GDWGEKYFDT-FDLIVVCASSLTDIDFNIMPKAMKVGGRIVSISIPEQHEMLSLKP 288

>1yqd_A Sinapyl alcohol dehydrogenase; lignin, monolignol, oxidoreductase, zinc-dependent, plant DE biosynthesis, substrate inhibition; HET: NAP; 1.65A {Populus tremuloides} PDB: 1yqx_A* Length = 366

 Score =  111 bits (281), Expect = 4e-28
 Identities = 76/290 (26%), Positives = 123/290 (42%), Gaps = 44/290 (15%)

Query: 29  LKIQPFELPSLGPYDVLVRMKAVGICGSDVHYLKTLRCADFVVKEPMVIGHECAGVIEKV 88
           L    F   + G  DV  ++   G+C SD+H   +++        P+V GHE  G + +V
Sbjct: 29  LSPFNFSRRATGEEDVRFKVLYCGVCHSDLH---SIKNDWGFSMYPLVPGHEIVGEVTEV 85

Query: 89  GSEVKTLVPGDRVALEPGI-----SCWRCDHCKGGRYNLCPEM------KFFATPPVHGS 137
           GS+VK +  GD+V    G+     +C  C+ C     N CP+M       +      +G 
Sbjct: 86  GSKVKKVNVGDKV----GVGCLVGACHSCESCANDLENYCPKMILTYASIYHDGTITYGG 141

Query: 138 LANQVVHPADLCFKLPDNVSLEEGA--MC------EPLSVGLHACRRANIG-PETNVLIM 188
            +N +V       + PDN+ L+ GA  +C       PL       +   +  P  ++ I+
Sbjct: 142 YSNHMVANERYIIRFPDNMPLDGGAPLLCAGITVYSPL-------KYFGLDEPGKHIGIV 194

Query: 189 GAGPIGLVTMLGAPRAFGAPRIVIVDVDDYRLSVAKEIGADNIVKVSTNLQDIAEEVEKI 248
           G G +G V +  A +AFG+   VI      +    K  GAD+ + VS +        E++
Sbjct: 195 GLGGLGHVAVKFA-KAFGSKVTVISTSPSKKEEALKNFGADSFL-VSRD-------QEQM 245

Query: 249 QKAMGTGIDVSFDCAGLNKTMSTALGATCAGGKVCLVGMGHHEMTVPLTP 298
           Q A GT +D   D       +    G   + GK+ LVG     + +P   
Sbjct: 246 QAAAGT-LDGIIDTVSAVHPLLPLFGLLKSHGKLILVGAPEKPLELPAFS 294

>2cf5_A Atccad5, CAD, cinnamyl alcohol dehydrogenase; lignin biosynthesis, metal-binding, NADP, oxidoreductase, zinc; 2.0A {Arabidopsis thaliana} PDB: 2cf6_A* Length = 357

 Score =  109 bits (276), Expect = 2e-27
 Identities = 66/295 (22%), Positives = 116/295 (39%), Gaps = 44/295 (14%)

Query: 34  FELPSLGPYDVLVRMKAVGICGSDVHYLKTLRCADFVVKEPMVIGHECAGVIEKVGSEVK 93
           + L   GP DV +R+   GIC +D+H     +    +   PMV GHE  G + +VGS+V 
Sbjct: 27  YTLRETGPEDVNIRIICCGICHTDLH---QTKNDLGMSNYPMVPGHEVVGEVVEVGSDVS 83

Query: 94  TLVPGDRVALEPGI-----SCWRCDHCKGGRYNLCPEM------KFFATPPVHGSLANQV 142
               GD V    G+      C  C  C+      CP+        +    P  G  A   
Sbjct: 84  KFTVGDIV----GVGCLVGCCGGCSPCERDLEQYCPKKIWSYNDVYINGQPTQGGFAKAT 139

Query: 143 VHPADLCFKLPDNVSLEEGA--MC------EPLSVGLHACRRANIG-PETNVLIMGAGPI 193
           V       K+P+ +++E+ A  +C       PL           +  P     I+G G +
Sbjct: 140 VVHQKFVVKIPEGMAVEQAAPLLCAGVTVYSPL-------SHFGLKQPGLRGGILGLGGV 192

Query: 194 GLVTMLGAPRAFGAPRIVIVDVDDYRLSVAKEIGADNIVKVSTNLQDIAEEVEKIQKAMG 253
           G + +  A +A G    VI   +  R    +++GAD+ V + ++         K+ +   
Sbjct: 193 GHMGVKIA-KAMGHHVTVISSSNKKREEALQDLGADDYV-IGSD-------QAKMSELAD 243

Query: 254 TGIDVSFDCAGLNKTMSTALGATCAGGKVCLVGMGHHEMTVPLTPAAVREVDVVG 308
           + +D   D   ++  +   L      GK+ L+G+ ++ +        +    + G
Sbjct: 244 S-LDYVIDTVPVHHALEPYLSLLKLDGKLILMGVINNPLQFLTPLLMLGRKVITG 297

>3tqh_A Quinone oxidoreductase; HET: NDP; 2.44A {Coxiella burnetii} Length = 321

 Score =  109 bits (274), Expect = 2e-27
 Identities = 62/359 (17%), Positives = 113/359 (31%), Gaps = 65/359 (18%)

Query: 19  MAAWLL----GVNTLKIQPFELPSLGPYDVLVRMKAVGICGSDVH------YLKTLRCAD 68
           M A           LK+     P      +L+++ A  +   D        ++      +
Sbjct: 7   MKAIQFDQFGPPKVLKLVDTPTPEYRKNQMLIKVHAASLNPIDYKTRNGSGFVAKKLKNN 66

Query: 69  FVVKEPMVIGHECAGVIEKVGSEVKTLVPGDRVALEPGISCWRCDHCKGGRYNLCPEMKF 128
                P  +G++ +G + ++GS+V  +  GD+V    G                      
Sbjct: 67  L----PSGLGYDFSGEVIELGSDVNNVNIGDKVMGIAGF--------------------- 101

Query: 129 FATPPVHGSLANQVVHPADLCFKLPDNVSLEEGAMCEPLSVGL---HACRRANIGPETNV 185
              P      A  V    D   +  + +S  + A   P   GL    A  +A +     V
Sbjct: 102 ---PDHPCCYAEYVCASPDTIIQKLEKLSFLQAA-SLPT-AGLTALQALNQAEVKQGDVV 156

Query: 186 LIMG-AGPIGLVTMLGAPRAFGAPRIVIVDVDDYRLSVAKEIGADNIVKVSTNLQDIAEE 244
           LI   AG +G + +  A +  G    VI        +  K +GA+  +      +D    
Sbjct: 157 LIHAGAGGVGHLAIQLA-KQKGT--TVITTASKRNHAFLKALGAEQCINYHE--EDFLLA 211

Query: 245 VEKIQKAMGTGIDVSFDCAGLNKTMSTALGATCAGGKVCLVGMGHHEMTVPLTPAAVREV 304
           +        T +D   D  G       ++      G   +V +        +  A  +  
Sbjct: 212 I-------STPVDAVIDLVG-GDVGIQSIDCLKETGC--IVSVPTITAGRVIEVAKQKHR 261

Query: 305 DVVGVFRYKNTWPL--CLELLRSGKIDVKPLVTHRFGFSQKEVEEAFETSARGGTAIKV 361
              G+ +  N   L    +L+   K+  +  ++  F  S  E   A E    G    K+
Sbjct: 262 RAFGLLKQFNIEELHYLGKLVSEDKL--RIEISRIFQLS--EAVTAHELLETGHVRGKL 316

>3two_A Mannitol dehydrogenase; cinnamyl-alcohol dehydrogenase, NADP(H) oxidoreductase; HET: NDP; 2.18A {Helicobacter pylori} Length = 348

 Score =  109 bits (275), Expect = 2e-27
 Identities = 67/293 (22%), Positives = 107/293 (36%), Gaps = 51/293 (17%)

Query: 29  LKIQPFELPSLGPYDVLVRMKAVGICGSDVHYLKTLRCADFVVKEPMVIGHECAGVIEKV 88
            K   F   ++GP DVL+ +   GIC SD+H   +          PM+ GHE AG+I++V
Sbjct: 17  FKPHDFSRHAVGPRDVLIDILYAGICHSDIH---SAYSEWKEGIYPMIPGHEIAGIIKEV 73

Query: 89  GSEVKTLVPGDRVALEPGI-----SCWRCDHCKGGRYNLCPEM--------KFFATPPVH 135
           G  VK    GD V    G+     SC  C  CK  +   C ++         F    P  
Sbjct: 74  GKGVKKFKIGDVV----GVGCFVNSCKACKPCKEHQEQFCTKVVFTYDCLDSFHDNEPHM 129

Query: 136 GSLANQVVHPADLCFKLPDNVSLEEGA--MC------EPLSVGLHACRRANIGPETNVLI 187
           G  +N +V   +    +  N  LE+ A  +C       PL       + + +   T V +
Sbjct: 130 GGYSNNIVVDENYVISVDKNAPLEKVAPLLCAGITTYSPL-------KFSKVTKGTKVGV 182

Query: 188 MGAGPIGLVTMLGAPRAFGAPRIVIVDVDDYRLSVAKEIGADNIVKVSTNLQDIAEEVEK 247
            G G +G + +  A  A GA   V    +  +   A  +G  +                 
Sbjct: 183 AGFGGLGSMAVKYA-VAMGAEVSVFARNEHKK-QDALSMGVKHFY-TDP----------- 228

Query: 248 IQKAMGTGIDVSFDCAGLNKTMSTALGATCAGGKVCLVGMGHHEMTVPLTPAA 300
            ++     +D        +  +   L      G + LVG+   E+   L+   
Sbjct: 229 -KQCKEE-LDFIISTIPTHYDLKDYLKLLTYNGDLALVGLPPVEVAPVLSVFD 279

>1wly_A CAAR, 2-haloacrylate reductase; NADPH-dependent oxidoreductase, oxidoreductase; 1.30A {Burkholderia SP} Length = 333

 Score =  107 bits (269), Expect = 1e-26
 Identities = 67/271 (24%), Positives = 114/271 (42%), Gaps = 45/271 (16%)

Query: 25  GVNTLKIQPFELPSLGPYDVLVRMKAVGICGSDVHYLKTLRCADFVVKEPMVIGHECAGV 84
           G +    +  ++ S GP  V +R  A+G+   D ++   +     V + P+V+G E A V
Sbjct: 12  GPDNFVWEEVKVGSPGPGQVRLRNTAIGVNFLDTYHRAGIPHPLVVGEPPIVVGFEAAAV 71

Query: 85  IEKVGSEVKTLVPGDRVALEPGISCWRCDHCKGGRYNLCPEMKFFATPPVHGSLANQVVH 144
           +E+VG  V     G+RV                              PP+ G+ + + ++
Sbjct: 72  VEEVGPGVTDFTVGERVC--------------------------TCLPPL-GAYSQERLY 104

Query: 145 PADLCFKLPDNVSLEEGAMCEPLSVGLHAC----RRANIGPETNVLIM-GAGPIG--LVT 197
           PA+   K+P ++ L++  +   +  G+ A     +   + P   VLI   AG +G  +V 
Sbjct: 105 PAEKLIKVPKDLDLDDVHLAGLMLKGMTAQYLLHQTHKVKPGDYVLIHAAAGGMGHIMVP 164

Query: 198 MLGAPRAFGAPRIVIVDV-DDYRLSVAKEIGADNIVKVSTNLQDIAEEVEKIQKAMGTGI 256
                R  GA   VI  V  + +   A+++G  + +  ST  QD AE V +I    G G+
Sbjct: 165 WA---RHLGA--TVIGTVSTEEKAETARKLGCHHTINYST--QDFAEVVREITG--GKGV 215

Query: 257 DVSFDCAGLNKTMSTALGATCAGGKVCLVGM 287
           DV +D  G   T+  +L      G     G 
Sbjct: 216 DVVYDSIG-KDTLQKSLDCLRPRGMCAAYGH 245

>3pi7_A NADH oxidoreductase; groes-like fold, NAD(P)-binding rossmann fold, structural GE joint center for structural genomics, JCSG; HET: MSE; 1.71A {Mesorhizobium loti} Length = 349

 Score =  106 bits (268), Expect = 2e-26
 Identities = 61/364 (16%), Positives = 108/364 (29%), Gaps = 65/364 (17%)

Query: 15  EEVNMAAWLLGVNTLKIQPFELPSLGPYDVLVRMKAVGICGSDV-----HYLKTLRCADF 69
           +  + +A       L+     +P+ GP  VL+++    I  SDV      Y         
Sbjct: 23  KTPSGSALEAMEPYLEQGRIAVPAPGPSQVLIKVNLASINPSDVAFIKGQY-------GQ 75

Query: 70  VVKEPMVIGHECAGVIEKVGSEVKT-LVPGDRVALEPGISCWRCDHCKGGRYNLCPEMKF 128
              +    G E  G I   G E     + G RVA   G+S                    
Sbjct: 76  PRVKGRPAGFEGVGTIVAGGDEPYAKSLVGKRVAFATGLS-------------------- 115

Query: 129 FATPPVHGSLANQVVHPADLCFKLPDNVSLEEGA--MCEPLSVGLHACRRANIGPETNVL 186
                  GS A   V  A  C  L D V  E+GA  +  PL+  +          E   +
Sbjct: 116 -----NWGSWAEYAVAEAAACIPLLDTVRDEDGAAMIVNPLTA-IAMFDIVKQEGEKAFV 169

Query: 187 IMGA-GPIGL-VTMLGAPRAFGAPRIVIVDVDDYRLSVAKEIGADNIVKVSTNLQDIAEE 244
           +      +   +  L   +  G   IV V  D+ ++++ K+IGA +++       D    
Sbjct: 170 MTAGASQLCKLIIGLA--KEEGFRPIVTVRRDE-QIALLKDIGAAHVLNEKA--PDFEAT 224

Query: 245 VEKIQKAMGTGIDVSFDCAGLNKTMSTALGATCAGGKVCLVGM--GHHEMTVPLTPAAVR 302
           + ++ K       +  D        S    A     +  + G       +         +
Sbjct: 225 LREVMK--AEQPRIFLDAVT-GPLASAIFNAMPKRARWIIYGRLDPDATVIREPGQLIFQ 281

Query: 303 EVDVVGVF--RYKNTWPLCL--------ELLRSGKIDVKPLVTHRFGFSQKEVEEAFETS 352
              + G +   +   +            +    G+      VT     ++       E +
Sbjct: 282 HKHIEGFWLSEWMRQFKERRGPAILEAQKRFSDGRW--STDVTAVVPLAEAIAWVPAELT 339

Query: 353 ARGG 356
              G
Sbjct: 340 KPNG 343

>4eye_A Probable oxidoreductase; structural genomics, niaid, national institute of allergy AN infectious diseases; 2.10A {Mycobacterium abscessus} Length = 342

 Score =  106 bits (268), Expect = 2e-26
 Identities = 82/381 (21%), Positives = 129/381 (33%), Gaps = 74/381 (19%)

Query: 6   MSQGEKEDGEEVNMAAWLL----GVNTLKIQPFELPSLGPYDVLVRMKAVGICGSDVHYL 61
           M   E +     +M A       G   L     E P  GP  V+V +KA G+C  D    
Sbjct: 9   MGTLEAQTQGPGSMKAIQAQSLSGPEGLVYTDVETPGAGPNVVVVDVKAAGVCFPDY--- 65

Query: 62  KTLRCAD---FVVKEPMVIGHECAGVIEKVGSEVKTLVPGDRVALEPGISCWRCDHCKGG 118
             L         ++ P V G E AGV+     E   + PGDRV                 
Sbjct: 66  --LMTKGEYQLKMEPPFVPGIETAGVVRSAP-EGSGIKPGDRVMAFNF------------ 110

Query: 119 RYNLCPEMKFFATPPVHGSLANQVVHPADLCFKLPDNVSLEEGAMCEPLSVG--LHA-CR 175
                            G  A +V          P  +   E       +      A  R
Sbjct: 111 ----------------IGGYAERVAVAPSNILPTPPQLDDAEAV-ALIANYHTMYFAYAR 153

Query: 176 RANIGPETNVLIMGA-GPIGLV-TMLGAPRAFGAPRIVIVDVDDYRLSVAKEIGADNIVK 233
           R  +     VL++GA G IG     +   +  GA  I +V+         K +GAD ++ 
Sbjct: 154 RGQLRAGETVLVLGAAGGIGTAAIQIA--KGMGAKVIAVVNRTA-ATEFVKSVGADIVLP 210

Query: 234 VSTNLQDIAEEVEKIQKAMGTGIDVSFDCAGLNKTMSTALGATCAGGKVCLVGM--GHHE 291
           +    +  A+ V +     G G+D+  D  G       A+    + G++ +VG   G   
Sbjct: 211 LE---EGWAKAVREATG--GAGVDMVVDPIG-GPAFDDAVRTLASEGRLLVVGFAAGGIP 264

Query: 292 MTVPLTPAAVREVDVVGVF----------RYKNTWPLCLELLRSGKIDVKPLVTHRFGFS 341
            T+ +    +R   ++GV               T     +L+  G   ++P V+ R   S
Sbjct: 265 -TIKVNRLLLRNASLIGVAWGEFLRTHADYLYETQAGLEKLVAEG---MRPPVSARIPLS 320

Query: 342 QKEVEEAFETSARGGTAIKVM 362
             E  +A +  A G    K++
Sbjct: 321 --EGRQALQDFADGKVYGKMV 339

>1uuf_A YAHK, zinc-type alcohol dehydrogenase-like protein YAHK; oxidoreductase, zinc binding, oxydoreductase, metal-binding; 1.76A {Escherichia coli} SCOP: b.35.1.2 c.2.1.1 Length = 369

 Score =  106 bits (268), Expect = 2e-26
 Identities = 64/280 (22%), Positives = 98/280 (35%), Gaps = 46/280 (16%)

Query: 29  LKIQPFELPSLGPYDVLVRMKAVGICGSDVHYLKTLRCADFVVKEPMVIGHECAGVIEKV 88
           L+         GP DV + +   G+C SD+H    +R        P V GHE  G +  V
Sbjct: 35  LEPMDITRREPGPNDVKIEIAYCGVCHSDLH---QVRSEWAGTVYPCVPGHEIVGRVVAV 91

Query: 89  GSEVKTLVPGDRVALEPGI-----SCWRCDHCKGGRYNLCPEMKF-------FATPPVHG 136
           G +V+   PGD V    G+     SC  C+ C+ G  N C  M                G
Sbjct: 92  GDQVEKYAPGDLV----GVGCIVDSCKHCEECEDGLENYCDHMTGTYNSPTPDEPGHTLG 147

Query: 137 SLANQVVHPADLCFKLPDNVSLEEGA---MC------EPLSVGLHACRRANIGPETNVLI 187
             + Q+V       ++             +C       PL       R    GP   V +
Sbjct: 148 GYSQQIVVHERYVLRIRHPQEQLAAVAPLLCAGITTYSPL-------RHWQAGPGKKVGV 200

Query: 188 MGAGPIGLVTMLGAPRAFGAPRIVIVDVDDYRLSVAKEIGADNIVKVSTNLQDIAEEVEK 247
           +G G +G + +  A  A GA  +     +  R   AK +GAD +V  S N        ++
Sbjct: 201 VGIGGLGHMGIKLA-HAMGAHVVAFTTSEAKR-EAAKALGADEVV-NSRN-------ADE 250

Query: 248 IQKAMGTGIDVSFDCAGLNKTMSTALGATCAGGKVCLVGM 287
           +   + +  D   +       +          G + LVG 
Sbjct: 251 MAAHLKS-FDFILNTVAAPHNLDDFTTLLKRDGTMTLVGA 289

>3gqv_A Enoyl reductase; medium-chain reductase (MDR superfamily), rossmann fold, NAD binding, oxidoreductase; HET: NAP; 1.74A {Aspergillus terreus} PDB: 3b6z_A* 3b70_A* Length = 371

 Score =  104 bits (261), Expect = 3e-25
 Identities = 65/382 (17%), Positives = 111/382 (29%), Gaps = 87/382 (22%)

Query: 18  NMAAWLLGV--NTLKIQPFELPSLGPYDVLVRMKAVGICGSDVHYLKTLRCADFVVKEPM 75
              A  +              P L    V VR++AV I  SD                  
Sbjct: 11  QQTALTVNDHDEVTVWNAAPCPMLPRDQVYVRVEAVAINPSDTSM------RGQFATPWA 64

Query: 76  VIGHECAGVIEKVGSEVKTLVPGDRVALEPGISCWRCDHCKGGRYNLCPEMKFFATPPVH 135
            +G + AG +  VGS+V  +  GDRV                               P  
Sbjct: 65  FLGTDYAGTVVAVGSDVTHIQVGDRV----------YGAQNEMCPR----------TPDQ 104

Query: 136 GSLANQVVHPADLCFKLPDNVSLEEGAMCEPLSV-----GLH----------ACRRANIG 180
           G+ +   V    +  K+P  +S E+ A   P  +      +           A +     
Sbjct: 105 GAFSQYTVTRGRVWAKIPKGLSFEQAA-ALPAGISTAGLAMKLLGLPLPSPSADQPPTHS 163

Query: 181 PETNVLIMG-AGPIGLVTMLGAPRAFGAPRIVIVDVDDYRLSVAKEIGADNIVKVSTNLQ 239
               VL+ G +     VTM    R  G   I I     +   +AK  GA+ +        
Sbjct: 164 KPVYVLVYGGSTATATVTMQML-RLSGY--IPIATCSPHNFDLAKSRGAEEV--FDYRAP 218

Query: 240 DIAEEVEKIQKAMGTGIDVSFDCAGLNKTMSTALGAT-CAGGKVCLVGMGHHEMTVPLTP 298
           ++    + I+      +  + DC    ++ +    A   AGG    +         P   
Sbjct: 219 NL---AQTIRTYTKNNLRYALDCITNVESTTFCFAAIGRAGGHYVSL------NPFPEHA 269

Query: 299 AAVREVDVVGVFRY-------------------------KNTWPLCLELLRSGKIDVKPL 333
           A  + V                                 ++ W +  +L+  G++   PL
Sbjct: 270 ATRKMVTTDWTLGPTIFGEGSTWPAPYGRPGSEEERQFGEDLWRIAGQLVEDGRLVHHPL 329

Query: 334 VTHRFGFSQKEVEEAFETSARG 355
              + GF    +++  E   +G
Sbjct: 330 RVVQGGFDH--IKQGMELVRKG 349

>3gms_A Putative NADPH:quinone reductase; structural genomics, putative quinone oxidoreductase, unknown function, PSI-2; 1.76A {Bacillus thuringiensis} Length = 340

 Score =  101 bits (254), Expect = 2e-24
 Identities = 58/346 (16%), Positives = 112/346 (32%), Gaps = 74/346 (21%)

Query: 29  LKIQPFELPSLGPYDVLVRMKAVGICGSDV-----HYLKTLRCADFVVKEPMVIGHECAG 83
           L+++   +  L   +V VRM    I  SD+      Y          +  P + G+E  G
Sbjct: 20  LQVEYKNIEPLKDNEVFVRMLVRPINPSDLIPITGAY-------AHRIPLPNIPGYEGVG 72

Query: 84  VIEKVGSEVKTLVPGDRVALEPGISCWRCDHCKGGRYNLCPEMKFFATPPVHGSLANQVV 143
           ++E VG+ V   + G RV    G                             G+    V 
Sbjct: 73  IVENVGAFVSRELIGKRVLPLRG----------------------------EGTWQEYVK 104

Query: 144 HPADLCFKLPDNVSLEEGA--MCEPLSVGLHACRRANIGPETNVLIMGA-GPIGL-VTML 199
             AD    +PD++     A     PL+  +      N+     +L+      IG     L
Sbjct: 105 TSADFVVPIPDSIDDFTAAQMYINPLTAWVTCTETLNLQRNDVLLVNACGSAIGHLFAQL 164

Query: 200 GAPRAFGAPRIVIVDVDDYRLSVAKEIGADNIVKVSTNLQDIAEEVEKIQKAMGTGIDVS 259
              +      I +   +         +GA  ++  ST    + E V ++    G G D +
Sbjct: 165 S--QILNFRLIAVTRNNK-HTEELLRLGAAYVIDTST--APLYETVMELTN--GIGADAA 217

Query: 260 FDCAGLNKTMSTALGATCAGGKVCLVGM--GHHEMTVPLTPAAVREVDVVGVFR------ 311
            D  G     +    +    G    +G+  G   + V       +      +F       
Sbjct: 218 IDSIG-GPDGNELAFSLRPNGHFLTIGLLSG---IQVNWAEIVTKAKVHANIFHLRHWND 273

Query: 312 ------YKNTWPLCLELLRSGKIDVKPL-VTHRFGFSQKEVEEAFE 350
                 ++ T+   + L+ + ++  + + V   +  +  +V+ A +
Sbjct: 274 EVSPYKWQETFRHLIRLVENEQL--RFMKVHSTYELA--DVKAAVD 315

>1yb5_A Quinone oxidoreductase; medium-chain dehydrogenase/reductase, quinon reduction, structural genomics, structural genomics consort; HET: NAP; 1.85A {Homo sapiens} SCOP: b.35.1.2 c.2.1.1 Length = 351

 Score =  100 bits (252), Expect = 3e-24
 Identities = 68/348 (19%), Positives = 120/348 (34%), Gaps = 77/348 (22%)

Query: 35  ELPSLGPYDVLVRMKAVGICGSDV-----HYLKTLRCADFVVKEPMVIGHECAGVIEKVG 89
            +P    + VL+++ A G+   +       Y             P   G + AGVIE VG
Sbjct: 51  AVPIPKDHQVLIKVHACGVNPVETYIRSGTY-------SRKPLLPYTPGSDVAGVIEAVG 103

Query: 90  SEVKTLVPGDRVALEPGISCWRCDHCKGGRYNLCPEMKFFATPPVHGSLANQVVHPADLC 149
                   GDRV                   +              G  A   +      
Sbjct: 104 DNASAFKKGDRVF-----------------TSSTI----------SGGYAEYALAADHTV 136

Query: 150 FKLPDNVSLEEGA-MCEPLSVGLHACR-RANIGPETNVLIMGA-GPIGLV-TMLGAPRAF 205
           +KLP+ +  ++GA +  P      A    A +    +VL+ GA G +GL    +   RA+
Sbjct: 137 YKLPEKLDFKQGAAIGIPYFTAYRALIHSACVKAGESVLVHGASGGVGLAACQIA--RAY 194

Query: 206 GAPRIVIVDV-DDYRLSVAKEIGADNIVKVSTNLQDIAEEVEKIQKAMGTGIDVSFDCAG 264
           G    ++     +    +  + GA  +        +  ++++K       GID+  +   
Sbjct: 195 GL--KILGTAGTEEGQKIVLQNGAHEVFNHRE--VNYIDKIKKYVG--EKGIDIIIEMLA 248

Query: 265 LNKTMSTALGATCAGGKVCLVGMGHHEMTVPLTPAAV--REVDVVGVFRYKNT------- 315
            N  +S  L     GG+V +VG      T+ + P     +E  ++GV  + +T       
Sbjct: 249 -NVNLSKDLSLLSHGGRVIVVGSRG---TIEINPRDTMAKESSIIGVTLFSSTKEEFQQY 304

Query: 316 ----WPLCLELLRSGKIDVKPLVTHRFGFSQKEVEEAFETSARGGTAI 359
                      +  G +  KP++  ++     +V EA E    G  A 
Sbjct: 305 AAALQA----GMEIGWL--KPVIGSQYPLE--KVAEAHENIIHGSGAT 344

>3jyn_A Quinone oxidoreductase; rossmann fold, protein-NADPH complex; HET: NDP; 2.01A {Pseudomonas syringae PV} PDB: 3jyl_A* Length = 325

 Score =  100 bits (251), Expect = 4e-24
 Identities = 73/276 (26%), Positives = 106/276 (38%), Gaps = 60/276 (21%)

Query: 25  GVNTLKIQPFELPSLGPYDVLVRMKAVGICGSDVHY------LKTLRCADFVVKEPMVIG 78
           G   L+   FE  + GP  V+VR KA+G+   D +Y         L         P  +G
Sbjct: 12  GPEVLEYVDFEPEAPGPQAVVVRNKAIGLNFIDTYYRSGLYPAPFL---------PSGLG 62

Query: 79  HECAGVIEKVGSEVKTLVPGDRVALEPGISCWRCDHCKGGRYNLCPEMKFFATPPVHGSL 138
            E AGV+E VG EV     GDRVA                          + T P+ G+ 
Sbjct: 63  AEGAGVVEAVGDEVTRFKVGDRVA--------------------------YGTGPL-GAY 95

Query: 139 ANQVVHPADLCFKLPDNVSLEEGAMCEPLSVGLHAC----RRANIGPETNVLIMG-AGPI 193
           +   V P     KL D+VS E+ A    +  GL       +   + P   +L    AG +
Sbjct: 96  SEVHVLPEANLVKLADSVSFEQAAAL--MLKGLTVQYLLRQTYQVKPGEIILFHAAAGGV 153

Query: 194 G--LVTMLGAPRAFGAPRIVIVDVDDYRLSVAKEIGADNIVKVSTNLQDIAEEVEKIQKA 251
           G          +A GA  I  V   + + + AK +GA   +  S   +D+A+ V ++   
Sbjct: 154 GSLACQWA---KALGAKLIGTVSSPE-KAAHAKALGAWETIDYSH--EDVAKRVLELTD- 206

Query: 252 MGTGIDVSFDCAGLNKTMSTALGATCAGGKVCLVGM 287
            G    V +D  G   T  T+L +    G V   G 
Sbjct: 207 -GKKCPVVYDGVG-QDTWLTSLDSVAPRGLVVSFGN 240

>1qor_A Quinone oxidoreductase; HET: NAP; 2.20A {Escherichia coli} SCOP: b.35.1.2 c.2.1.1 Length = 327

 Score =   99 bits (250), Expect = 4e-24
 Identities = 63/269 (23%), Positives = 98/269 (36%), Gaps = 46/269 (17%)

Query: 25  GVNTLKIQPFELPSLGPYDVLVRMKAVGICGSDVHYLKTLRCADFVVKE-PMVIGHECAG 83
           G   L+   F        ++ V  KA+GI   D +     R   +     P  +G E AG
Sbjct: 12  GPEVLQAVEFTPADPAENEIQVENKAIGINFIDTYI----RSGLYPPPSLPSGLGTEAAG 67

Query: 84  VIEKVGSEVKTLVPGDRVALEPGISCWRCDHCKGGRYNLCPEMKFFATPPVHGSLANQVV 143
           ++ KVGS VK +  GDRV                           +A   + G+ ++   
Sbjct: 68  IVSKVGSGVKHIKAGDRVV--------------------------YAQSAL-GAYSSVHN 100

Query: 144 HPADLCFKLPDNVSLEEGAMCEPLSVGLHA----CRRANIGPETNVLIMG-AGPIGLVTM 198
             AD    LP  +S E+ A       GL       +   I P+   L    AG +GL+  
Sbjct: 101 IIADKAAILPAAISFEQAAAS--FLKGLTVYYLLRKTYEIKPDEQFLFHAAAGGVGLIAC 158

Query: 199 LGAPRAFGAPRIVIVDVDDYRLSVAKEIGADNIVKVSTNLQDIAEEVEKIQKAMGTGIDV 258
             A +A GA  I  V     +   A + GA  ++      +D+ E +++I    G  + V
Sbjct: 159 QWA-KALGAKLIGTVGTAQ-KAQSALKAGAWQVINYRE--EDLVERLKEITG--GKKVRV 212

Query: 259 SFDCAGLNKTMSTALGATCAGGKVCLVGM 287
            +D  G   T   +L      G +   G 
Sbjct: 213 VYDSVG-RDTWERSLDCLQRRGLMVSFGN 240

>3goh_A Alcohol dehydrogenase, zinc-containing; NP_718042.1, alcohol dehydrogenase superfamily protein, ALCO dehydrogenase groes-like domain; 1.55A {Shewanella oneidensis} Length = 315

 Score = 99.2 bits (248), Expect = 6e-24
 Identities = 69/363 (19%), Positives = 129/363 (35%), Gaps = 76/363 (20%)

Query: 21  AWLLGVNTLKIQPFELPSLGPYDVLVRMKAVGICGSDVHYLKTLRCADFVVKEPMVIGHE 80
           A+    +++ +   ++P+L   D+LV+ +A+GI   D    K ++          V G +
Sbjct: 9   AYQTKTHSVTLNSVDIPALAADDILVQNQAIGINPVDW---KFIKANPINWSNGHVPGVD 65

Query: 81  CAGVIEKVGSEVKTLVPGDRVALEPGISCWRCDHCKGGRYNLCPEMKFFATPPVH-GSLA 139
            AGVI KVG++V + + G RV                           + T     GS A
Sbjct: 66  GAGVIVKVGAKVDSKMLGRRV--------------------------AYHTSLKRHGSFA 99

Query: 140 NQVVHPADLCFKLPDNVSLEEGAMCEPLSVGL---HACRRANIGPETNVLIMGAGPIG-L 195
              V   D    LPDN+S E  A   P    L    A  +  +  +  VLI+G G +  L
Sbjct: 100 EFTVLNTDRVMTLPDNLSFERAA-ALPC-PLLTAWQAFEKIPLTKQREVLIVGFGAVNNL 157

Query: 196 VTMLGAPRAFGAPRIVIVDVDDYRLSVAKEIGADNIVKVSTNLQDIAEEVEKIQKAMGTG 255
           +T +      G   +V +       ++A + G  ++       ++ ++  +         
Sbjct: 158 LTQML--NNAGY--VVDLVSASLSQALAAKRGVRHLY------REPSQVTQ--------K 199

Query: 256 IDVSFDCAGLNKTMSTALGATCAGGKVCLV--------------GMGHHEMTVPLTPAAV 301
               FD    ++  +  + +  A G +  +               + +HE+ +       
Sbjct: 200 YFAIFDAVN-SQNAAALVPSLKANGHIICIQDRIPAPIDPAFTRTISYHEIALGALHDFG 258

Query: 302 REVDVVGVFRYKNTWPLCLELLRSGKIDVKPLVTHRFGFSQKEVEEAFETSARGGTAIKV 361
              D   + +        L L+  GK+  +      F F Q  + EA + S +      +
Sbjct: 259 DRQDWQILMQQGEA---LLTLIAQGKM--EIAAPDIFRFEQ--MIEALDHSEQTKLKTVL 311

Query: 362 MFN 364
             N
Sbjct: 312 TLN 314

>4a27_A Synaptic vesicle membrane protein VAT-1 homolog-L; oxidoreductase; 2.10A {Homo sapiens} Length = 349

 Score = 99.2 bits (248), Expect = 1e-23
 Identities = 74/382 (19%), Positives = 118/382 (30%), Gaps = 108/382 (28%)

Query: 19  MAAWLL----GVNTLKIQPFELPSLGPYDVLVRMKAVGICGSDV-----HYLKTLRCADF 69
           M A +L    G+N L++    +P     ++ +R+KA G+   D+     +        D 
Sbjct: 4   MRAVVLAGFGGLNKLRLFRKAMPEPQDGELKIRVKACGLNFIDLMVRQGNI-------DN 56

Query: 70  VVKEPMVIGHECAGVIEKVGSEVKTLVPGDRV-ALEPGISCWRCDHCKGGRYNLCPEMKF 128
             K P+V G EC+G++E +G  VK    GDRV A                          
Sbjct: 57  PPKTPLVPGFECSGIVEALGDSVKGYEIGDRVMAFVNY---------------------- 94

Query: 129 FATPPVHGSLANQVVHPADLCFKLPDNVSLEEGAMCEPLSVG-----LHACRRANIGPET 183
                   + A  V  P +  +K+PD++S  E A   P++       L     AN+    
Sbjct: 95  -------NAWAEVVCTPVEFVYKIPDDMSFSEAA-AFPMNFVTAYVMLF--EVANLREGM 144

Query: 184 NVLI-MGAGPIGL-VTMLGAPRAFGAPRIVIVDVDDYRLSVAKEIGADNIVKVSTNLQDI 241
           +VL+    G +G  V  L           V      ++    K+       +      D 
Sbjct: 145 SVLVHSAGGGVGQAVAQLC--STVPN-VTVFGTASTFKHEAIKDSVTHLFDRN----ADY 197

Query: 242 AEEVEKIQKAMGTGIDVSFDCAGLNKTMSTALGATCAGGKVCLVGM-------------- 287
            +EV++I      G+D+  DC          L      G   L G               
Sbjct: 198 VQEVKRIS---AEGVDIVLDCLC-GDNTGKGLSLLKPLGTYILYGSSNMVTGETKSFFSF 253

Query: 288 ---GHHEMTVPLTPAAVREVDVVGVF----------------RYKNTWPLCLELLRSGKI 328
                    V           + G                    +        L    KI
Sbjct: 254 AKSWWQVEKVNPIKLYEENKVIAGFSLLNLLFKQGRAGLIRGVVEKLIG----LYNQKKI 309

Query: 329 DVKPLVTHRFGFSQKEVEEAFE 350
             KP+V   +     EV+EA +
Sbjct: 310 --KPVVDSLWALE--EVKEAMQ 327

>3iup_A Putative NADPH:quinone oxidoreductase; YP_296108.1, structur genomics, joint center for structural genomics, JCSG, prote structure initiative; HET: MSE NDP; 1.70A {Ralstonia eutropha} Length = 379

 Score = 98.8 bits (246), Expect = 2e-23
 Identities = 58/411 (14%), Positives = 114/411 (27%), Gaps = 98/411 (23%)

Query: 6   MSQGEKEDGEEVNMAAWLLGVNTLKIQPFELPSLGPYDVLVRMKAVGICGSDVHYLK--- 62
           +    K  GE             L +   + P  GP +VL+R++A  +  SD+  L    
Sbjct: 8   LRSRIKSSGELE-----------LSLDSIDTPHPGPDEVLIRIEASPLNPSDLGLLFGAA 56

Query: 63  -----------------------TLRCADFVVKEPMVIGHECAGVIEKVGSEVKTLVPGD 99
                                   +R     +   M +G+E AGV+ + GS         
Sbjct: 57  DMSTAKASGTAERPIVTARVPEGAMRSMAGRLDASMPVGNEGAGVVVEAGSSPAAQALMG 116

Query: 100 RVALEPGISCWRCDHCKGGRYNLCPEMKFFATPPVHGSLANQVVHPADLCFKLPDNVSLE 159
           +     G + +                            +     PAD C  LP+  +  
Sbjct: 117 KTVAAIGGAMY----------------------------SQYRCIPADQCLVLPEGATPA 148

Query: 160 EGAMC--EPLSVGLHACRRANIGPETNVLIMG-AGPIGLVTMLGAPRAFGAPRIVIVDVD 216
           +GA     PL+  L       +   + ++    A  +G +         G   + IV   
Sbjct: 149 DGASSFVNPLTA-LGMVETMRLEGHSALVHTAAASNLGQMLNQIC-LKDGIKLVNIVRKQ 206

Query: 217 DYRLSVAKEIGADNIVKVSTNLQDIAEEVEKIQKAMGTGIDVSFDCAG---LNKTMSTAL 273
           + +  + K  GA ++   +       +++ +    + TG  ++FD  G   L   + T +
Sbjct: 207 E-QADLLKAQGAVHV--CNAASPTFMQDLTEA--LVSTGATIAFDATGGGKLGGQILTCM 261

Query: 274 GATCAGGKVCLVGMGHHEMT------------VPLTPAAVREVDVVGVFRY--------K 313
            A            G                             + G   +        +
Sbjct: 262 EAALNKSAREYSRYGSTTHKQVYLYGGLDTSPTEFNRNFGMAWGMGGWLLFPFLQKIGRE 321

Query: 314 NTWPLCLELLRSGKIDVKPLVTHRFGFSQKEVEEAFETSARGGTAIKVMFN 364
               L   ++   K       +     ++    +      +  T  K + N
Sbjct: 322 RANALKQRVVAELKTTFASHYSKEISLAEVLDLDMIAVYNKRATGEKYLIN 372

>3gaz_A Alcohol dehydrogenase superfamily protein; oxidoreductase, PSI-II, alcohol dehydrogenase superf structural genomics; 1.96A {Novosphingobium aromaticivorans} Length = 343

 Score = 94.2 bits (235), Expect = 7e-22
 Identities = 72/344 (20%), Positives = 120/344 (34%), Gaps = 73/344 (21%)

Query: 31  IQPFELPSLGPYDVLVRMKAVGICGSDVH----YLKTLRCADFVVKEPMVIGHECAGVIE 86
           ++    P   P  VLV+++A G    D           +        P ++G + AG + 
Sbjct: 22  LRKLARPQPAPGQVLVQIEASGTNPLDAKIRAGEAPHAQQPL-----PAILGMDLAGTVV 76

Query: 87  KVGSEVKTLVPGDRV-ALEPGISCWRCDHCKGGRYNLCPEMKFFATPPVHGSLANQVVHP 145
            VG EV +   GD V  L  G+                          + G+ A      
Sbjct: 77  AVGPEVDSFRVGDAVFGLTGGV------------------------GGLQGTHAQFAAVD 112

Query: 146 ADLCFKLPDNVSLEEGAMCEPLSVGLHA----CRRANIGPETNVLIM-GAGPIG-LVTML 199
           A L    P  +++ + +   PL V + A      RA +     VLI  G G +G +   +
Sbjct: 113 ARLLASKPAALTMRQAS-VLPL-VFITAWEGLVDRAQVQDGQTVLIQGGGGGVGHVAIQI 170

Query: 200 GAPRAFGAPRIVIVDVDDYRLSVAKEIGADNIVKVSTNLQDIAEEVEKIQKAMGTGIDVS 259
               A GA   V        L   +++GA  I       ++  +   +     G G D+ 
Sbjct: 171 A--LARGA--RVFATARGSDLEYVRDLGATPID----ASREPEDYAAEH--TAGQGFDLV 220

Query: 260 FDCAGLNKTMSTALGATCAGGK-VCLVGMGHHEMTVPLTPAAVREVDVVGVF----RYKN 314
           +D  G    +  +  A    G  V  +G G H+    L P + ++    GVF       N
Sbjct: 221 YDTLG-GPVLDASFSAVKRFGHVVSCLGWGTHK----LAPLSFKQATYSGVFTLHTLLAN 275

Query: 315 TWPL--------CLELLRSGKIDVKPLVTHRFGFSQKEVEEAFE 350
                          L+++GK+   P +  R  FS  E+  A++
Sbjct: 276 EGLAHFGEMLREADALVQTGKL--APRLDPRT-FSIAEIGSAYD 316

>3qwb_A Probable quinone oxidoreductase; rossmann fold, quinone oxidoreductases, NADPH, cytoplasm and oxidoreductase; HET: NDP; 1.59A {Saccharomyces cerevisiae} PDB: 3qwa_A* Length = 334

 Score = 93.1 bits (232), Expect = 1e-21
 Identities = 61/271 (22%), Positives = 106/271 (39%), Gaps = 49/271 (18%)

Query: 25  GVNTLKIQPFELPSLGPYDVLVRMKAVGICGSDVHYLKTLRCADFVVKEPMVIGHECAGV 84
           G + +K + + +PS+   ++L++ K  G+   + ++    R   +  ++P V+G E +G 
Sbjct: 19  GYDVIKYEDYPVPSISEEELLIKNKYTGVNYIESYF----RKGIYPCEKPYVLGREASGT 74

Query: 85  IEKVGSEVKTLVPGDRVALEPGISCWRCDHCKGGRYNLCPEMKFFATPPVHGSLANQVVH 144
           +   G  V     GD+VA                          + +       +   + 
Sbjct: 75  VVAKGKGVTNFEVGDQVA--------------------------YISNSTFAQYS--KIS 106

Query: 145 PADLCFKLPDNVSLEEGAMCEPLSV-GLHAC----RRANIGPETNVLIMG-AGPIGLVT- 197
                 KLP   S EE  +     +  L A        ++     VL+   AG +GL+  
Sbjct: 107 SQGPVMKLPKGTSDEELKLYAAGLLQVLTALSFTNEAYHVKKGDYVLLFAAAGGVGLILN 166

Query: 198 -MLGAPRAFGAPRIVIVDVDDYRLSVAKEIGADNIVKVSTNLQDIAEEVEKIQKAMGTGI 256
            +L   +  GA  I +   D+ +L +AKE GA+ ++  S   +DI  +V K     G G+
Sbjct: 167 QLL---KMKGAHTIAVASTDE-KLKIAKEYGAEYLINASK--EDILRQVLKFTN--GKGV 218

Query: 257 DVSFDCAGLNKTMSTALGATCAGGKVCLVGM 287
           D SFD  G   T   +L A    G     G 
Sbjct: 219 DASFDSVG-KDTFEISLAALKRKGVFVSFGN 248

>4dup_A Quinone oxidoreductase; PSI-biology, structural genomics, protein structure initiati structural genomics research consortium, nysgrc; 2.45A {Rhizobium etli} Length = 353

 Score = 92.3 bits (230), Expect = 3e-21
 Identities = 81/375 (21%), Positives = 124/375 (33%), Gaps = 82/375 (21%)

Query: 18  NMAAWLL----GVNTLKIQPFELPSLGPYDVLVRMKAVGICGSDV-----HYLKTLRCAD 68
            M    L    G + + I    LP  G  +VLVR +A+G+   D+      Y        
Sbjct: 28  EMRFVDLKSFGGPDVMVIGKRPLPVAGEGEVLVRAEAIGVNRPDIAQRQGSY-------P 80

Query: 69  FVVKEPMVIGHECAGVIEKVGSEVKTLVPGDRVALEPGISCWRCDHCKGGRYNLCPEMKF 128
                  ++G E +G I  VG  V     GD+V          C    GG Y        
Sbjct: 81  PPKDASPILGLELSGEIVGVGPGVSGYAVGDKV----------CGLANGGAY-------- 122

Query: 129 FATPPVHGSLANQVVHPADLCFKLPDNVSLEEGA-MCEP-LSVGLHACRRANIGPETNVL 186
                     A   + PA      P      + A + E   +V  +  + A +    +VL
Sbjct: 123 ----------AEYCLLPAGQILPFPKGYDAVKAAALPETFFTVWANLFQMAGLTEGESVL 172

Query: 187 IM-GAGPIGLV-TMLGAPRAFGAPRIVIVDVDDYRLSVAKEIGADNIVKVSTNLQDIAEE 244
           I  G   IG     L   RAFGA           +    + +GA   +   +  +D A  
Sbjct: 173 IHGGTSGIGTTAIQLA--RAFGAEVYATAGSTG-KCEACERLGAKRGINYRS--EDFAAV 227

Query: 245 VEKIQKAMGTGIDVSFDCAGLNKTMSTALGATCAGGKVCLVGM--GHHEMTVPLTPAAVR 302
           ++      G G+D+  D  G        + +    G + ++    G     V L+P  V+
Sbjct: 228 IKAET---GQGVDIILDMIG-AAYFERNIASLAKDGCLSIIAFLGGAVAEKVNLSPIMVK 283

Query: 303 EVDVVGVF------RYK---------NTWPLCLELLRSGKIDVKPLVTHRFGFSQKEVEE 347
            + V G          K           WP    LL +G +   P++   F F   +V +
Sbjct: 284 RLTVTGSTMRPRTAEEKRAIRDDLLSEVWP----LLEAGTV--APVIHKVFAFE--DVAD 335

Query: 348 AFETSARGGTAIKVM 362
           A      G    KVM
Sbjct: 336 AHRLLEEGSHVGKVM 350

>2vn8_A Reticulon-4-interacting protein 1; mitochondrion, transit peptide, receptor inhibitor; HET: NDP CIT; 2.1A {Homo sapiens} Length = 375

 Score = 91.7 bits (228), Expect = 7e-21
 Identities = 75/392 (19%), Positives = 130/392 (33%), Gaps = 92/392 (23%)

Query: 19  MAAWLL----GVNTLKI-QPFELPSLG-PYDVLVRMKAVGICGSDVH----YLKTLR--- 65
             AW++        L+  Q   +P +  P +V+V++ A  +   DV+    Y  T     
Sbjct: 22  SMAWVIDKYGKNEVLRFTQNMMMPIIHYPNEVIVKVHAASVNPIDVNMRSGYGATALNMK 81

Query: 66  -----CADFVVKEPMVIGHECAGVIEKVGSEVKTLVPGDRVALEPGISCWRCDHCKGGRY 120
                      + P+ +G + +GV+ + G +VK   PGD V                   
Sbjct: 82  RDPLHVKIKGEEFPLTLGRDVSGVVMECGLDVKYFKPGDEV------------------- 122

Query: 121 NLCPEMKFFATPPVH-GSLANQVVHPADLCFKLPDNVSLEEGAMCEPLSVGL-------- 171
                  + A PP   G+L+  VV   +     P +++  + A   P  V L        
Sbjct: 123 -------WAAVPPWKQGTLSEFVVVSGNEVSHKPKSLTHTQAA-SLPY-VALTAWSAINK 173

Query: 172 HACRRANIGPETNVLIMGA-GPIGLVTMLGAPRAFGAPRIVIVDVDDYRLSVAKEIGADN 230
                        VLI+GA G +G   +    +A+ A   V          + +++GAD+
Sbjct: 174 VGGLNDKNCTGKRVLILGASGGVGTFAIQVM-KAWDA--HVTAVCSQDASELVRKLGADD 230

Query: 231 IVKVSTNLQDIAEEVEKIQKAMGTGIDVSFDCAGLNKTMSTALGATCAGGKVCLVGMGHH 290
           ++   +    + E+++          D   D  G   T + A            V +   
Sbjct: 231 VIDYKS--GSVEEQLKS-----LKPFDFILDNVG-GSTETWAPDFLKKWSGATYVTLVTP 282

Query: 291 E-------------------MTVPLTPAAVREVDVVGVFRYKNTWPL--CLELLRSGKID 329
                               +         + V     F   +   L    EL+ +GKI 
Sbjct: 283 FLLNMDRLGIADGMLQTGVTVGSKALKHFWKGVHYRWAFFMASGPCLDDIAELVDAGKI- 341

Query: 330 VKPLVTHRFGFSQKEVEEAFETSARGGTAIKV 361
            +P++   F FS  +V EAF    RG    K 
Sbjct: 342 -RPVIEQTFPFS--KVPEAFLKVERGHARGKT 370

>1iz0_A Quinone oxidoreductase; APO-enzyme, riken structural genomics/proteomics initiative, RSGI, structural genomics; 2.30A {Thermus thermophilus} SCOP: b.35.1.2 c.2.1.1 PDB: 1iyz_A 2cf2_D Length = 302

 Score = 88.0 bits (219), Expect = 5e-20
 Identities = 76/355 (21%), Positives = 123/355 (34%), Gaps = 89/355 (25%)

Query: 29  LKIQPFELPSLGPYDVLVRMKAVGICGSDVHYLKTLRCAD---FVVKEPMVIGHECAGVI 85
           L++     P     +V++R++AVG+  +D      L         +  P + G E  GV+
Sbjct: 13  LELVDLPEPEAEEGEVVLRVEAVGLNFADH-----LMRLGAYLTRLHPPFIPGMEVVGVV 67

Query: 86  EKVGSEVKTLVPGDRVALEPGISCWRCDHCKGGRYNLCPEMKFFATPPVHGSLANQVVHP 145
           E           G R A                           A  P  G LA +V  P
Sbjct: 68  E-----------GRRYA---------------------------ALVP-QGGLAERVAVP 88

Query: 146 ADLCFKLPDNVSLEEGAMCEPLSVG--LHACRRANIGPETNVLIMG-AGPIGLVT-MLGA 201
                 LP+ +S EE A   P+S      A +RA   P   VL+   AG +G     +  
Sbjct: 89  KGALLPLPEGLSPEEAA-AFPVSFLTAYLALKRAQARPGEKVLVQAAAGALGTAAVQVA- 146

Query: 202 PRAFGAPRIVIVDVDDYRLSVAKEIGADNIVKVSTNLQDIAEEVEKIQKAMGTGIDVSFD 261
            RA G   +      + +L++   +GA+            AE  E+ +     G+D+  +
Sbjct: 147 -RAMGLRVLAAASRPE-KLALPLALGAEEAA-------TYAEVPERAKA--WGGLDLVLE 195

Query: 262 CAGLNKTMSTALGATCAGGKVCLVGM-GHHEMTVPLTPAAVREVDVVGVF-RY------- 312
             G  K +  +LG    GG++  +G        +P      R + V+G +          
Sbjct: 196 VRG--KEVEESLGLLAHGGRLVYIGAAEGEVAPIPPLRLMRRNLAVLGFWLTPLLREGAL 253

Query: 313 -----KNTWPLCLELLRSGKIDVKPLVTHRFGFSQKEVEEAFETSARGGTAIKVM 362
                    P         ++  +P+V   F F+  E E AF      G   KV+
Sbjct: 254 VEEALGFLLPRL-----GREL--RPVVGPVFPFA--EAEAAFRALLDRGHTGKVV 299

>4dvj_A Putative zinc-dependent alcohol dehydrogenase Pro; structural genomics, PSI-biology, NEW YORK structural genomi research consortium, nysgrc; 1.99A {Rhizobium etli} Length = 363

 Score = 88.9 bits (221), Expect = 6e-20
 Identities = 61/359 (16%), Positives = 117/359 (32%), Gaps = 66/359 (18%)

Query: 27  NTLKIQPFELPSLGPYDVLVRMKAVGICGSDVHYLKTLRCADFVVKEPMVIGHECAGVIE 86
            +L       P+   +D+LV +KAV +   D    K  R       +  VIG++ AG++ 
Sbjct: 38  ASLLDIELPKPAPAGHDILVEVKAVSVNPVDY---KVRRSTPPDGTDWKVIGYDAAGIVS 94

Query: 87  KVGSEVKTLVPGDRVALEPGISCWRCDHCKGGRYNLCPEMKFFATPPVH-GSLANQVVHP 145
            VG +V    PGD V                          F+A   +  G+ A   +  
Sbjct: 95  AVGPDVTLFRPGDEV--------------------------FYAGSIIRPGTNAEFHLVD 128

Query: 146 ADLCFKLPDNVSLEEGAMCEPLSVGLHA----CRRANIGPETN-----VLIM-GAGPIGL 195
             +  + P  +   E A   PL   + A      R ++          +LI+ GAG +G 
Sbjct: 129 ERIVGRKPKTLDWAEAA-ALPL-TSITAWEAFFDRLDVNKPVPGAAPAILIVGGAGGVGS 186

Query: 196 VTMLGAPRAFGAPRIVIVDVDDYRLSVAKEIGADNIVKVSTNLQDIAEEVEKIQKAMGTG 255
           + +  A +      ++            K +GA +++  S   + +A EV  +       
Sbjct: 187 IAVQIARQRTDL-TVIATASRPETQEWVKSLGAHHVIDHS---KPLAAEVAALG---LGA 239

Query: 256 IDVSFDCAGLNKTMSTALGATCAGGKVCL-VGMGHHEMTVPLTPAAVREVDVVGVFRYKN 314
               F     +K  +         G+ CL            +     + V +     +  
Sbjct: 240 PAFVFSTTHTDKHAAEIADLIAPQGRFCLIDDPS----AFDIMLFKRKAVSIHHELMFTR 295

Query: 315 TWPLCLELLRSGKI-----------DVKPLVTHRFG-FSQKEVEEAFETSARGGTAIKV 361
                 ++   G++            ++  +T+R    +   +++A      G    KV
Sbjct: 296 PMFGTPDMSEQGRLLNDVSRLVDEGRLRTTLTNRLSPINAANLKQAHALVESGTARGKV 354

>3fbg_A Putative arginate lyase; structural genomics, unknown function, PSI-2, protein structure initiative; 1.60A {Staphylococcus haemolyticus} Length = 346

 Score = 83.1 bits (206), Expect = 5e-18
 Identities = 66/366 (18%), Positives = 124/366 (33%), Gaps = 81/366 (22%)

Query: 27  NTLKIQPFELPSLGPYDVLVRMKAVGICGSDVHYLKTLRCADFVVKEPMVIGHECAGVIE 86
           N  K    ++P    +++LV+++++ +   D       R    V K P V+G +  GV+E
Sbjct: 18  NLFKTFNLDIPEPKVHEILVKIQSISVNPVDTK----QR-LMDVSKAPRVLGFDAIGVVE 72

Query: 87  KVGSEVKTLVPGDRVALEPGISCWRCDHCKGGRYNLCPEMKFFA-TPPVHGSLANQVVHP 145
            VG+EV     GD V                          +++ +P  +GS A   +  
Sbjct: 73  SVGNEVTMFNQGDIV--------------------------YYSGSPDQNGSNAEYQLIN 106

Query: 146 ADLCFKLPDNVSLEE-GAMCEPLSVGLHA----CRRANIGPETN------VLIM-GAGPI 193
             L  K P N+S E+  ++  PL  G+ A         I    N      +LI+ GAG +
Sbjct: 107 ERLVAKAPKNISAEQAVSL--PL-TGITAYETLFDVFGISRNRNENEGKTLLIINGAGGV 163

Query: 194 GLVTMLGAPRAFGAPRIVIVDV-DDYRLSVAKEIGADNIVKVSTNLQDIAEEVEKIQKAM 252
           G +    A +A+G    VI     +  +   K++GAD ++    +L      + + +   
Sbjct: 164 GSIATQIA-KAYGL--RVITTASRNETIEWTKKMGADIVLNHKESL------LNQFKTQG 214

Query: 253 GTGIDVSFDCAGLNKTMSTALGATCAGGKVCL-VGMGHHEMTVPLTPAAVREVDVVGVFR 311
              +D  F     +      +      G +   V   +      L     + +     F 
Sbjct: 215 IELVDYVFCTFNTDMYYDDMIQLVKPRGHIATIVAFEN---DQDLNALKPKSLSFSHEFM 271

Query: 312 YKNTWPLCL---------------ELLRSGKIDVKPLVTHRFG-FSQKEVEEAFETSARG 355
           +    PL                   +       +P  T      + + + +A +     
Sbjct: 272 F--ARPLNQTDDMIKHHEYLEDITNKVEQNIY--QPTTTKVIEGLTTENIYQAHQILESN 327

Query: 356 GTAIKV 361
               K+
Sbjct: 328 TMIGKL 333

>2j8z_A Quinone oxidoreductase; medium-chain dehydrogenase- reductases, QUIN oxidoreductase, oxidative stress response; HET: NAP; 2.50A {Homo sapiens} PDB: 2oby_A* Length = 354

 Score = 80.0 bits (198), Expect = 6e-17
 Identities = 65/378 (17%), Positives = 121/378 (32%), Gaps = 83/378 (21%)

Query: 18  NMAAWLL----GVNTLKIQPFELPSLGPYDVLVRMKAVGICGSDV-----HYLKTLRCAD 68
           +M A       G   L ++    PS G  +VL+++ A  +  +D+      Y        
Sbjct: 22  SMLAVHFDKPGGPENLYVKEVAKPSPGEGEVLLKVAASALNRADLMQRQGQY-------- 73

Query: 69  FVVK--EPMVIGHECAGVIEKVGSEVKT-LVPGDRVALEPGISCWRCDHCKGGRYNLCPE 125
                    ++G E +G + ++G   +     GD                 GG       
Sbjct: 74  -DPPPGASNILGLEASGHVAELGPGCQGHWKIGDTA----------MALLPGGGQ----- 117

Query: 126 MKFFATPPVHGSLANQVVHPADLCFKLPDNVSLEEGA-MCEP-LSVGLHACRRANIGPET 183
                        A  V  P  L   +P+ ++L + A + E  L+         N+    
Sbjct: 118 -------------AQYVTVPEGLLMPIPEGLTLTQAAAIPEAWLTAFQLLHLVGNVQAGD 164

Query: 184 NVLIM-GAGPIGLV-TMLGAPRAFGAPRIVIVDVDDYRLSVAKEIGADNIVKVSTNLQDI 241
            VLI  G   +G     L   R  GA  +V       +L +A+++GA          +D 
Sbjct: 165 YVLIHAGLSGVGTAAIQLT--RMAGAIPLVTAGSQK-KLQMAEKLGAAAGFNYKK--EDF 219

Query: 242 AEEVEKIQKAMGTGIDVSFDCAGLNKTMSTALGATCAGGKVCLVGM--GHHEMTVPLTPA 299
           +E   K  K  G G+++  DC G        +      G+  L G+  G        +  
Sbjct: 220 SEATLKFTK--GAGVNLILDCIG-GSYWEKNVNCLALDGRWVLYGLMGGGDINGPLFSKL 276

Query: 300 AVREVDVVGVF------RYK---------NTWPLCLELLRSGKIDVKPLVTHRFGFSQKE 344
             +   ++         +YK            P         ++   P++   +  +  E
Sbjct: 277 LFKRGSLITSLLRSRDNKYKQMLVNAFTEQILPH-FSTEGPQRL--LPVLDRIYPVT--E 331

Query: 345 VEEAFETSARGGTAIKVM 362
           ++EA +         K++
Sbjct: 332 IQEAHKYMEANKNIGKIV 349

>3slk_A Polyketide synthase extender module 2; rossmann fold, NADPH, oxidoreductase; HET: NDP; 3.00A {Saccharopolyspora spinosa} Length = 795

 Score = 76.7 bits (189), Expect = 2e-15
 Identities = 63/336 (18%), Positives = 109/336 (32%), Gaps = 63/336 (18%)

Query: 32  QPFELPSLGPYDVLVRMKAVGICGSDVHYLKTLRCADFVVKEPMVIGHECAGVIEKVGSE 91
           +P     LG  +V + M+A G+   D   L  L     +      +G E AGV+ + G  
Sbjct: 229 EPTATAPLGDGEVRIAMRAAGVNFRDA--LIALG----MYPGVASLGSEGAGVVVETGPG 282

Query: 92  VKTLVPGDRVALEPGISCWRCDHCKGGRYNLCPEMKFFATPPVHGSLANQVVHPADLCFK 151
           V  L PGDRV                                +  +     V    +  +
Sbjct: 283 VTGLAPGDRVMG-----------------------------MIPKAFGPLAVADHRMVTR 313

Query: 152 LPDNVSLEEGAMCEPLSVG--LHA-CRRANIGPETNVLI-MGAGPIGLVTMLGAPRAFGA 207
           +P   S    A   P+      +A    A + P  ++L+   AG +G+  +  A R  GA
Sbjct: 314 IPAGWSFARAA-SVPIVFLTAYYALVDLAGLRPGESLLVHSAAGGVGMAAIQLA-RHLGA 371

Query: 208 PRIVIVDVDDYRLSVAKEIGADNIVKVSTNLQDIAEEVEKIQKAMGTGIDVSFDCAGLNK 267
                   D ++   A E+  +++   S    D  ++        G G+DV  +     +
Sbjct: 372 EVYATASEDKWQ---AVELSREHLA-SSRTC-DFEQQFLGATG--GRGVDVVLNSLA-GE 423

Query: 268 TMSTALGATCAGGKVCLVGMG------HHEMTVPLTPAAVREVDVVGVF--RYKNTWPLC 319
               +L     GG    + +G        E+       + +  D V     R        
Sbjct: 424 FADASLRMLPRGG--RFLELGKTDVRDPVEVADAHPGVSYQAFDTVEAGPQRIGEMLHEL 481

Query: 320 LELLRSGKIDVKPLVTHRFGFSQKEVEEAFETSARG 355
           +EL     +  +PL    +   Q    EA    ++ 
Sbjct: 482 VELFEGRVL--EPLPVTAWDVRQ--APEALRHLSQA 513

>2c0c_A Zinc binding alcohol dehydrogenase, domain containing 2; oxidoreductase, quinone oxidoreductase, medium-chain dehydrogenase/reductase; HET: NAP; 1.45A {Homo sapiens} PDB: 2x1h_A* 2x7h_A* 2wek_A* Length = 362

 Score = 75.0 bits (185), Expect = 3e-15
 Identities = 63/357 (17%), Positives = 111/357 (31%), Gaps = 75/357 (21%)

Query: 35  ELPSLGPYDVLVRMKAVGICGSDVHYLKTLRCADFVVKEPMVIGHECAGVIEKVGSEVKT 94
            +P  G  D+LVR + VG+  SD++Y       D  VK P  IG E  G +  +G     
Sbjct: 47  PVPLPGDGDLLVRNRFVGVNASDINYSAGR--YDPSVKPPFDIGFEGIGEVVALGLSASA 104

Query: 95  -LVPGDRVALEPGISCWRCDHCKGGRYNLCPEMKFFATPPVHGSLANQVVHPADLCFKLP 153
               G  VA                                 GS A   V PA +   +P
Sbjct: 105 RYTVGQAVAYMAP-----------------------------GSFAEYTVVPASIATPVP 135

Query: 154 DNVSLEEGAMCEPL---SVGLHACRRANIGP-ETNVLIMGA-GPIG-LVTMLGAPRAFGA 207
                E   +        + L       +   +  VL+  A G  G     L   +    
Sbjct: 136 SVKP-EYLTLLVSGTTAYISLK--ELGGLSEGKK-VLVTAAAGGTGQFAMQLS--KKAKC 189

Query: 208 PRIVIVDVDDYRLSVAKEIGADNIVKVSTNLQDIAEEVEKIQKAMGTGIDVSFDCAGLNK 267
             I     D+ + +  K +G D  +   T  + +   ++   +    G+DV ++  G   
Sbjct: 190 HVIGTCSSDE-KSAFLKSLGCDRPINYKT--EPVGTVLK---QEYPEGVDVVYESVG-GA 242

Query: 268 TMSTALGATCAGGKVCLVGM-GHHEMTVPLTPAA---------VREVDVVG--VFRYKNT 315
               A+ A    G++ ++G    ++    L+P            +   V G  +  Y + 
Sbjct: 243 MFDLAVDALATKGRLIVIGFISGYQTPTGLSPVKAGTLPAKLLKKSASVQGFFLNHYLSK 302

Query: 316 WPLCLE----LLRSGKIDVK------PLVTHRFGFSQKEVEEAFETSARGGTAIKVM 362
           +   +     +  SG +  +             G     +  A      G    K++
Sbjct: 303 YQAAMSHLLEMCVSGDLVCEVDLGDLSPEGRFTGLES--IFRAVNYMYMGKNTGKIV 357

>1tt7_A YHFP; alcohol dehydrogenase, Zn-dependent, NAD, structural genomics, protein structure initiative, PSI; 2.70A {Bacillus subtilis} SCOP: b.35.1.2 c.2.1.1 PDB: 1y9e_A* Length = 330

 Score = 44.2 bits (105), Expect = 3e-05
 Identities = 55/300 (18%), Positives = 107/300 (35%), Gaps = 64/300 (21%)

Query: 28  TLKIQPFELPSLGPYDVLVRMKAVGICGSDVHYLKTLRCADF--VVKE-PMVIGHECAGV 84
           ++ ++      L    VL+++       S ++Y   L       +V+E P+++G + AG 
Sbjct: 18  SVHVKTISTEDLPKDGVLIKVAY-----SGINYKDGLAGKAGGNIVREYPLILGIDAAGT 72

Query: 85  IEKVGSEVKTLVPGDRVALEPGISCWR--CDHCKGGRYNLCPEMKFFATPPVHGSLANQV 142
           +    S       GD V      + +                           G L+   
Sbjct: 73  VVS--SNDPRFAEGDEVIA----TSYELGVSR--------------------DGGLSEYA 106

Query: 143 VHPADLCFKLPDNVSLEE----GAMCEPLSVGLHACRRANIGPE-TNVLIMGAGP----- 192
             P D    LP N+SL+E    G      ++ +H   +  + PE  +VL+ GA       
Sbjct: 107 SVPGDWLVPLPQNLSLKEAMVYGTAGFTAALSVHRLEQNGLSPEKGSVLVTGATGGVGGI 166

Query: 193 -IGLVTMLGAPRAFGAPRIVIVDVDDYRLSVAKEIGADNIVKVSTNLQDIAEEVEKIQKA 251
            + ++   G         +V    +       K++GA  ++          +  +   KA
Sbjct: 167 AVSMLNKRGYD-------VVASTGNREAADYLKQLGASEVI-------SREDVYDGTLKA 212

Query: 252 MGTGI-DVSFDCAGLNKTMSTALGATCAGGKVCLVGM-GHHEMTVPLTPAAVREVDVVGV 309
           +       + D  G  K +++ L     GG V + G+ G  E+   + P  +R V ++G+
Sbjct: 213 LSKQQWQGAVDPVG-GKQLASLLSKIQYGGSVAVSGLTGGGEVPATVYPFILRGVSLLGI 271

>1xa0_A Putative NADPH dependent oxidoreductases; structural genomics, protein structure initiative, MCSG; HET: DTY; 2.80A {Geobacillus stearothermophilus} SCOP: b.35.1.2 c.2.1.1 Length = 328

 Score = 43.1 bits (102), Expect = 7e-05
 Identities = 52/298 (17%), Positives = 100/298 (33%), Gaps = 60/298 (20%)

Query: 28  TLKIQPFELPSLGPYDVLVRMKAVGICGSDVHYLKTLRCADF--VVKE-PMVIGHECAGV 84
           T  +Q   +  L   DVLVR+       S V+Y   L       +VK  P V G + AGV
Sbjct: 17  TAGVQTISMDDLPEGDVLVRVHY-----SSVNYKDGLASIPDGKIVKTYPFVPGIDLAGV 71

Query: 85  IEKVGSEVKTLVPGDRVALEPGISCWRCDHCKGGRYNLCPEMKFFATPPVHGSLANQVVH 144
           +    S+      GD V      + +      G  +               G  +     
Sbjct: 72  VVS--SQHPRFREGDEVIA----TGYEI----GVTH--------------FGGYSEYARL 107

Query: 145 PADLCFKLPDNVSLEE----GAMCEPLSVGLHACRRANIGPETNVLIMGAGP-------I 193
             +    LP  ++L+E    G      ++ +H      + PE   +++           +
Sbjct: 108 HGEWLVPLPKGLTLKEAMAIGTAGFTAALSIHRLEEHGLTPERGPVLVTGATGGVGSLAV 167

Query: 194 GLVTMLGAPRAFGAPRIVIVDVDDYRLSVAKEIGADNIVKVSTNLQDIAEEVEKIQKAMG 253
            ++   G         +             + +GA  ++          + + +  + + 
Sbjct: 168 SMLAKRGYT-------VEASTGKAAEHDYLRVLGAKEVL-------AREDVMAERIRPLD 213

Query: 254 TGI-DVSFDCAGLNKTMSTALGATCAGGKVCLVGM-GHHEMTVPLTPAAVREVDVVGV 309
                 + D  G  +T++T L     GG V + G+ G  E+   + P  +R V ++G+
Sbjct: 214 KQRWAAAVDPVG-GRTLATVLSRMRYGGAVAVSGLTGGAEVPTTVHPFILRGVSLLGI 270

>2vz8_A Fatty acid synthase; transferase, phosphopantetheine, multienzyme, megasynthase, fatty acid synthesis; 3.2A {Sus scrofa} PDB: 2vz9_A* Length = 2512

 Score = 42.6 bits (100), Expect = 2e-04
 Identities = 58/353 (16%), Positives = 101/353 (28%), Gaps = 79/353 (22%)

Query: 35   ELPSLGPYDVLVRMKAVGICGSDVHYLKTLRCADFVVKEPMVIGHECAGVIEKVGSEVKT 94
                    D L  +    +   DV  +         +    + G                
Sbjct: 1553 YALPASCQDRLCSVYYTSLNFRDV--MLATG----KLSPDSIPGKWLTRDCMLGMEFSGR 1606

Query: 95   LVPGDRVALEPGISCWRCDHCKGGRYNLCPEMKFFATPPVHGSLANQVVHPADLCFKLPD 154
               G RV                        M           LA  V+      +++P 
Sbjct: 1607 DASGRRV------------------------MGMVPA----EGLATSVLLLQHATWEVPS 1638

Query: 155  NVSLEEGAMCEPLSV---------GLHACRRANIGPETNVLI-MGAGPIGLVTMLGAPRA 204
              +LEE A     SV          L    R  + P  +VLI  G+G +G   +  A  +
Sbjct: 1639 TWTLEEAA-----SVPIVYTTAYYSLV--VRGRMQPGESVLIHSGSGGVGQAAIAIA-LS 1690

Query: 205  FGAPRIVIVDVD---DYRLSVAKEIGADNIVKVSTNLQDIAEEVEKIQKAMGTGIDVSFD 261
             G      V       Y  +   ++          N +D + E   ++   G G+D+  +
Sbjct: 1691 RGCRVFTTVGSAEKRAYLQARFPQLDETCFA----NSRDTSFEQHVLRHTAGKGVDLVLN 1746

Query: 262  CAGLNKTMSTALGATCAGGKVCLVGMG--------HHEMTVPLTPAAVREVDVVGVF--- 310
                 + +  ++      G    + +G           M V L       + +  +F   
Sbjct: 1747 SLA-EEKLQASVRCLAQHG--RFLEIGKFDLSNNHALGMAVFLKNVTFHGILLDSLFEEG 1803

Query: 311  --RYKNTWPLCLELLRSGKIDVKPLVTHRFGFSQKEVEEAFETSARGGTAIKV 361
               ++    L    ++ G   V+PL    F  +  +VE AF   A+G    KV
Sbjct: 1804 GATWQEVSELLKAGIQEGV--VQPLKCTVFPRT--KVEAAFRYMAQGKHIGKV 1852

Structure Templates Detected by HHsearch

Original result of HHsearch against PDB70 database

ID	Length	Definition	Probability
Query	365
3m6i_A	363	L-arabinitol 4-dehydrogenase; medium chain dehydro	100.0
1pl8_A	356	Human sorbitol dehydrogenase; NAD, oxidoreductase;	100.0
1e3j_A	352	NADP(H)-dependent ketose reductase; oxidoreductase	100.0
4ej6_A	370	Putative zinc-binding dehydrogenase; structural ge	100.0
4a2c_A	346	Galactitol-1-phosphate 5-dehydrogenase; oxidoreduc	100.0
2d8a_A	348	PH0655, probable L-threonine 3-dehydrogenase; pyro	100.0
3uko_A	378	Alcohol dehydrogenase class-3; alcohol dehydrogena	100.0
1p0f_A	373	NADP-dependent alcohol dehydrogenase; ADH topology	100.0
2dq4_A	343	L-threonine 3-dehydrogenase; NAD-dependent, oxidor	100.0
3s2e_A	340	Zinc-containing alcohol dehydrogenase superfamily;	100.0
1h2b_A	359	Alcohol dehydrogenase; oxidoreductase, archaea, hy	100.0
1e3i_A	376	Alcohol dehydrogenase, class II; HET: NAD; 2.08A {	100.0
1cdo_A	374	Alcohol dehydrogenase; oxidoreductase, oxidoreduct	100.0
1f8f_A	371	Benzyl alcohol dehydrogenase; rossmann fold, oxido	100.0
3jv7_A	345	ADH-A; dehydrogenase, nucleotide binding, rossmann	100.0
2jhf_A	374	Alcohol dehydrogenase E chain; oxidoreductase, met	100.0
3fpc_A	352	NADP-dependent alcohol dehydrogenase; oxydoreducta	100.0
2fzw_A	373	Alcohol dehydrogenase class III CHI chain; S-nitro	100.0
1vj0_A	380	Alcohol dehydrogenase, zinc-containing; TM0436, st	100.0
4eez_A	348	Alcohol dehydrogenase 1; site-saturation mutagenes	100.0
1rjw_A	339	ADH-HT, alcohol dehydrogenase; oxidoreductase, NAD	100.0
3two_A	348	Mannitol dehydrogenase; cinnamyl-alcohol dehydroge	100.0
2h6e_A	344	ADH-4, D-arabinose 1-dehydrogenase; rossman fold,	100.0
2hcy_A	347	Alcohol dehydrogenase 1; tetramer of asymmetric di	100.0
3uog_A	363	Alcohol dehydrogenase; structural genomics, protei	100.0
2eih_A	343	Alcohol dehydrogenase; zinc ION binding protein, s	100.0
1piw_A	360	Hypothetical zinc-type alcohol dehydrogenase- like	100.0
2dph_A	398	Formaldehyde dismutase; dismutation of aldehydes,	100.0
1jvb_A	347	NAD(H)-dependent alcohol dehydrogenase; archaeon,	100.0
3ip1_A	404	Alcohol dehydrogenase, zinc-containing; structural	100.0
1kol_A	398	Formaldehyde dehydrogenase; oxidoreductase; HET: N	100.0
2b5w_A	357	Glucose dehydrogenase; nucleotide binding motif, o	100.0
1uuf_A	369	YAHK, zinc-type alcohol dehydrogenase-like protein	100.0
2cf5_A	357	Atccad5, CAD, cinnamyl alcohol dehydrogenase; lign	100.0
1yqd_A	366	Sinapyl alcohol dehydrogenase; lignin, monolignol,	100.0
3krt_A	456	Crotonyl COA reductase; structural genomics, prote	100.0
4a0s_A	447	Octenoyl-COA reductase/carboxylase; oxidoreductase	100.0
4dup_A	353	Quinone oxidoreductase; PSI-biology, structural ge	100.0
2cdc_A	366	Glucose dehydrogenase glucose 1-dehydrogenase, DHG	100.0
4eye_A	342	Probable oxidoreductase; structural genomics, niai	100.0
3qwb_A	334	Probable quinone oxidoreductase; rossmann fold, qu	100.0
4dvj_A	363	Putative zinc-dependent alcohol dehydrogenase Pro;	100.0
3tqh_A	321	Quinone oxidoreductase; HET: NDP; 2.44A {Coxiella	100.0
3gaz_A	343	Alcohol dehydrogenase superfamily protein; oxidore	100.0
3pi7_A	349	NADH oxidoreductase; groes-like fold, NAD(P)-bindi	100.0
3gqv_A	371	Enoyl reductase; medium-chain reductase (MDR super	100.0
3fbg_A	346	Putative arginate lyase; structural genomics, unkn	100.0
3gms_A	340	Putative NADPH:quinone reductase; structural genom	100.0
3goh_A	315	Alcohol dehydrogenase, zinc-containing; NP_718042.	100.0
4a27_A	349	Synaptic vesicle membrane protein VAT-1 homolog-L;	100.0
2j8z_A	354	Quinone oxidoreductase; medium-chain dehydrogenase	100.0
3jyn_A	325	Quinone oxidoreductase; rossmann fold, protein-NAD	100.0
1yb5_A	351	Quinone oxidoreductase; medium-chain dehydrogenase	100.0
1zsy_A	357	Mitochondrial 2-enoyl thioester reductase; medium-	100.0
1gu7_A	364	Enoyl-[acyl-carrier-protein] reductase [NADPH, B-s	100.0
1wly_A	333	CAAR, 2-haloacrylate reductase; NADPH-dependent ox	100.0
1qor_A	327	Quinone oxidoreductase; HET: NAP; 2.20A {Escherich	100.0
4b7c_A	336	Probable oxidoreductase; NADP cofactor, rossmann f	100.0
2c0c_A	362	Zinc binding alcohol dehydrogenase, domain contain	100.0
3nx4_A	324	Putative oxidoreductase; csgid, structural genomic	100.0
2vn8_A	375	Reticulon-4-interacting protein 1; mitochondrion,	100.0
1tt7_A	330	YHFP; alcohol dehydrogenase, Zn-dependent, NAD, st	100.0
3iup_A	379	Putative NADPH:quinone oxidoreductase; YP_296108.1	100.0
2zb4_A	357	Prostaglandin reductase 2; rossmann fold, alternat	100.0
1xa0_A	328	Putative NADPH dependent oxidoreductases; structur	100.0
1iz0_A	302	Quinone oxidoreductase; APO-enzyme, riken structur	100.0
2j3h_A	345	NADP-dependent oxidoreductase P1; double bond redu	100.0
1v3u_A	333	Leukotriene B4 12- hydroxydehydrogenase/prostaglan	100.0
3slk_A	795	Polyketide synthase extender module 2; rossmann fo	100.0
2vz8_A	2512	Fatty acid synthase; transferase, phosphopantethei	99.97
1pqw_A	198	Polyketide synthase; rossmann fold, dimer, structu	99.83
2yvl_A	248	TRMI protein, hypothetical protein; tRNA, methyltr	99.08
1gpj_A	404	Glutamyl-tRNA reductase; tRNA-dependent tetrapyrro	98.9
1pjc_A	361	Protein (L-alanine dehydrogenase); oxidoreductase,	98.67
1l7d_A	384	Nicotinamide nucleotide transhydrogenase, subunit	98.44
2eez_A	369	Alanine dehydrogenase; TTHA0216, structural genomi	98.39
2vhw_A	377	Alanine dehydrogenase; NAD, secreted, oxidoreducta	98.38
1x13_A	401	NAD(P) transhydrogenase subunit alpha; NAD(H)-bind	98.37
3ce6_A	494	Adenosylhomocysteinase; protein-substrate complex,	98.26
1o54_A	277	SAM-dependent O-methyltransferase; TM0748, structu	98.12
3oj0_A	144	Glutr, glutamyl-tRNA reductase; structural genomic	98.08
4dio_A	405	NAD(P) transhydrogenase subunit alpha PART 1; stru	97.96
3fpf_A	298	Mtnas, putative uncharacterized protein; thermonic	97.84
3p2y_A	381	Alanine dehydrogenase/pyridine nucleotide transhy;	97.82
1i9g_A	280	Hypothetical protein RV2118C; mtase, adoMet, cryst	97.82
1p91_A	269	Ribosomal RNA large subunit methyltransferase A; R	97.79
3ic5_A	118	Putative saccharopine dehydrogenase; structural ge	97.77
2g1u_A	155	Hypothetical protein TM1088A; structural genomics,	97.58
2b25_A	336	Hypothetical protein; structural genomics, methyl	97.56
3gvp_A	435	Adenosylhomocysteinase 3; protein CO-factor comple	97.56
3d4o_A	293	Dipicolinate synthase subunit A; NP_243269.1, stru	97.54
2rir_A	300	Dipicolinate synthase, A chain; structural genomic	97.33
4fgs_A	273	Probable dehydrogenase protein; PSI-biology, nysgr	97.23
3c85_A	183	Putative glutathione-regulated potassium-efflux S	97.22
3njr_A	204	Precorrin-6Y methylase; methyltransferase, decarbo	97.19
3ond_A	488	Adenosylhomocysteinase; plant protein, enzyme-subs	97.19
3e05_A	204	Precorrin-6Y C5,15-methyltransferase (decarboxyla;	97.18
3grz_A	205	L11 mtase, ribosomal protein L11 methyltransferase	97.13
3fwz_A	140	Inner membrane protein YBAL; TRKA-N domain, E.coli	97.1
3n58_A	464	Adenosylhomocysteinase; ssgcid, hydrolase, structu	97.09
4eso_A	255	Putative oxidoreductase; NADP, structural genomics	96.97
1jg1_A	235	PIMT;, protein-L-isoaspartate O-methyltransferase;	96.97
3oig_A	266	Enoyl-[acyl-carrier-protein] reductase [NADH]; fat	96.93
3hm2_A	178	Precorrin-6Y C5,15-methyltransferase; alpha-beta-s	96.91
2nyu_A	196	Putative ribosomal RNA methyltransferase 2; SAM, s	96.83
3llv_A	141	Exopolyphosphatase-related protein; NAD(P)-binding	96.8
3grk_A	293	Enoyl-(acyl-carrier-protein) reductase (NADH); ssg	96.8
3lbf_A	210	Protein-L-isoaspartate O-methyltransferase; modifi	96.79
2pwy_A	258	TRNA (adenine-N(1)-)-methyltransferase; mtase, ado	96.79
3h9u_A	436	Adenosylhomocysteinase; NAD CO-factor complex, str	96.78
3cea_A	346	MYO-inositol 2-dehydrogenase; NP_786804.1, oxidore	96.73
2d1y_A	256	Hypothetical protein TT0321; strucrtural genomics,	96.71
1nvm_B	312	Acetaldehyde dehydrogenase (acylating), 4-hydroxy-	96.69
3gem_A	260	Short chain dehydrogenase; structural genomics, AP	96.67
3u5t_A	267	3-oxoacyl-[acyl-carrier-protein] reductase; struct	96.67
3l6e_A	235	Oxidoreductase, short-chain dehydrogenase/reducta;	96.67
4fs3_A	256	Enoyl-[acyl-carrier-protein] reductase [NADPH] FA;	96.66
2yxe_A	215	Protein-L-isoaspartate O-methyltransferase; rossma	96.63
3v2g_A	271	3-oxoacyl-[acyl-carrier-protein] reductase; struct	96.62
2ekp_A	239	2-deoxy-D-gluconate 3-dehydrogenase; structural ge	96.61
3is3_A	270	17BETA-hydroxysteroid dehydrogenase; short chain d	96.6
3ew7_A	221	LMO0794 protein; Q8Y8U8_lismo, putative NAD-depend	96.58
3nyw_A	250	Putative oxidoreductase; fatty acid synthesis,3-ox	96.57
3e8x_A	236	Putative NAD-dependent epimerase/dehydratase; stru	96.57
3ged_A	247	Short-chain dehydrogenase/reductase SDR; SCOR, ros	96.56
2hmt_A	144	YUAA protein; RCK, KTN, KTR, KTRA, ktrab, membrane	96.54
3ak4_A	263	NADH-dependent quinuclidinone reductase; SDR, (R)-	96.54
3p19_A	266	BFPVVD8, putative blue fluorescent protein; rossma	96.53
1uls_A	245	Putative 3-oxoacyl-acyl carrier protein reductase;	96.51
3mb5_A	255	SAM-dependent methyltransferase; RNA methyltransfe	96.51
2ae2_A	260	Protein (tropinone reductase-II); oxidoreductase,	96.5
3h7a_A	252	Short chain dehydrogenase; oxidoreductase, PSI-2,	96.49
2fk8_A	318	Methoxy mycolic acid synthase 4; S-adenosylmethion	96.47
4fn4_A	254	Short chain dehydrogenase; NADH-binding, rossmann	96.46
1ae1_A	273	Tropinone reductase-I; oxidoreductase, tropane alk	96.46
4e6p_A	259	Probable sorbitol dehydrogenase (L-iditol 2-dehyd;	96.45
3ijr_A	291	Oxidoreductase, short chain dehydrogenase/reducta;	96.45
4b79_A	242	PA4098, probable short-chain dehydrogenase; oxidor	96.43
1yde_A	270	Retinal dehydrogenase/reductase 3; oxidoreductase,	96.42
1dl5_A	317	Protein-L-isoaspartate O-methyltransferase; isoasp	96.4
3dfz_A	223	SIRC, precorrin-2 dehydrogenase; NAD dehydrogenase	96.39
3uf0_A	273	Short-chain dehydrogenase/reductase SDR; gluconate	96.38
2z1n_A	260	Dehydrogenase; reductase, SDR, oxidoreductase; 1.8	96.38
3e18_A	359	Oxidoreductase; dehydrogenase, NAD-binding, struct	96.37
3f1l_A	252	Uncharacterized oxidoreductase YCIK; E. coli, NADP	96.37
2hnk_A	239	SAM-dependent O-methyltransferase; modified rossma	96.35
3imf_A	257	Short chain dehydrogenase; structural genomics, in	96.34
3o26_A	311	Salutaridine reductase; short chain dehydrogenase/	96.34
1jw9_B	249	Molybdopterin biosynthesis MOEB protein; MOEB: mod	96.34
3qiv_A	253	Short-chain dehydrogenase or 3-oxoacyl-[acyl-CARR	96.33
3pk0_A	262	Short-chain dehydrogenase/reductase SDR; ssgcid, s	96.32
1g0o_A	283	Trihydroxynaphthalene reductase; protein-NADPH-act	96.32
4dqx_A	277	Probable oxidoreductase protein; structural genomi	96.32
3rkr_A	262	Short chain oxidoreductase; rossmann fold; HET: NA	96.3
3abi_A	365	Putative uncharacterized protein PH1688; L-lysine	96.29
3i1j_A	247	Oxidoreductase, short chain dehydrogenase/reducta;	96.29
3rwb_A	247	TPLDH, pyridoxal 4-dehydrogenase; short chain dehy	96.29
1sny_A	267	Sniffer CG10964-PA; alpha and beta protein, rossma	96.29
3hem_A	302	Cyclopropane-fatty-acyl-phospholipid synthase 2; p	96.28
4dyv_A	272	Short-chain dehydrogenase/reductase SDR; structura	96.27
3lyl_A	247	3-oxoacyl-(acyl-carrier-protein) reductase; alpha	96.27
3tfo_A	264	Putative 3-oxoacyl-(acyl-carrier-protein) reducta;	96.27
2jah_A	247	Clavulanic acid dehydrogenase; short-chain dehydro	96.27
3r1i_A	276	Short-chain type dehydrogenase/reductase; structur	96.26
1xg5_A	279	ARPG836; short chain dehydrogenase, human, SGC, st	96.26
3tjr_A	301	Short chain dehydrogenase; structural genomics, se	96.26
3zv4_A	281	CIS-2,3-dihydrobiphenyl-2,3-DIOL dehydrogenase; ox	96.25
3dii_A	247	Short-chain dehydrogenase/reductase SDR; SCOR, ros	96.25
3v8b_A	283	Putative dehydrogenase, possibly 3-oxoacyl-[acyl-	96.25
1iy8_A	267	Levodione reductase; oxidoreductase; HET: NAD; 1.6	96.25
1c1d_A	355	L-phenylalanine dehydrogenase; amino acid dehydrog	96.25
2rhc_B	277	Actinorhodin polyketide ketoreductase; oxidoreduct	96.24
2gpy_A	233	O-methyltransferase; structural genomics, PSI, pro	96.24
3ioy_A	319	Short-chain dehydrogenase/reductase SDR; structura	96.23
3rd5_A	291	Mypaa.01249.C; ssgcid, structural genomics, seattl	96.23
1xq1_A	266	Putative tropinone reducatse; structural genomics,	96.22
1hdc_A	254	3-alpha, 20 beta-hydroxysteroid dehydrogenase; oxi	96.22
3ucx_A	264	Short chain dehydrogenase; ssgcid, seattle structu	96.22
3k31_A	296	Enoyl-(acyl-carrier-protein) reductase; ssgcid, NI	96.21
3ai3_A	263	NADPH-sorbose reductase; rossmann-fold, NADPH-depe	96.2
2b4q_A	276	Rhamnolipids biosynthesis 3-oxoacyl-[acyl- carrier	96.2
3rih_A	293	Short chain dehydrogenase or reductase; structural	96.2
3n74_A	261	3-ketoacyl-(acyl-carrier-protein) reductase; seatt	96.2
3op4_A	248	3-oxoacyl-[acyl-carrier protein] reductase; 3-keto	96.18
3lf2_A	265	Short chain oxidoreductase Q9HYA2; SDR, SCOR, ross	96.18
2a4k_A	263	3-oxoacyl-[acyl carrier protein] reductase; reduct	96.17
3mti_A	185	RRNA methylase; SAM-dependent, PSI, MCSG, structur	96.17
4dry_A	281	3-oxoacyl-[acyl-carrier-protein] reductase; struct	96.17
3gaf_A	256	7-alpha-hydroxysteroid dehydrogenase; seattle stru	96.17
1yb1_A	272	17-beta-hydroxysteroid dehydrogenase type XI; shor	96.17
2ag5_A	246	DHRS6, dehydrogenase/reductase (SDR family) member	96.16
3svt_A	281	Short-chain type dehydrogenase/reductase; ssgcid,	96.16
4had_A	350	Probable oxidoreductase protein; structural genomi	96.16
4g81_D	255	Putative hexonate dehydrogenase; enzyme function i	96.15
2nxc_A	254	L11 mtase, ribosomal protein L11 methyltransferase	96.15
3r6d_A	221	NAD-dependent epimerase/dehydratase; structural ge	96.15
3grp_A	266	3-oxoacyl-(acyl carrierprotein) reductase; structu	96.14
3cxt_A	291	Dehydrogenase with different specificities; rossma	96.14
3gvc_A	277	Oxidoreductase, probable short-chain type dehydrog	96.14
1yo6_A	250	Putative carbonyl reductase sniffer; tyrosine-depe	96.13
3r3s_A	294	Oxidoreductase; structural genomics, csgid, center	96.13
2ph5_A	480	Homospermidine synthase; alpha-beta protein, struc	96.13
1xkq_A	280	Short-chain reductase family member (5D234); parra	96.13
2z2v_A	365	Hypothetical protein PH1688; L-lysine dehydrogenas	96.12
2ew8_A	249	(S)-1-phenylethanol dehydrogenase; transferase; 2.	96.11
2pd6_A	264	Estradiol 17-beta-dehydrogenase 8; short-chain deh	96.11
2wsb_A	254	Galactitol dehydrogenase; oxidoreductase, SDR, ros	96.1
3sju_A	279	Keto reductase; short-chain dehydrogenase, oxidore	96.08
3tox_A	280	Short chain dehydrogenase; structural genomics, PS	96.08
4gkb_A	258	3-oxoacyl-[acyl-carrier protein] reductase; putati	96.07
3f9i_A	249	3-oxoacyl-[acyl-carrier-protein] reductase; 3-keto	96.07
4egf_A	266	L-xylulose reductase; structural genomics, ssgcid,	96.07
1xhl_A	297	Short-chain dehydrogenase/reductase family member	96.07
3eey_A	197	Putative rRNA methylase; rRNA methylation, S-adeno	96.06
2pbf_A	227	Protein-L-isoaspartate O-methyltransferase beta-A	96.05
1o5i_A	249	3-oxoacyl-(acyl carrier protein) reductase; TM1169	96.05
1geg_A	256	Acetoin reductase; SDR family, oxidoreductase; HET	96.05
1wma_A	276	Carbonyl reductase [NADPH] 1; oxidoreductase; HET:	96.04
3oid_A	258	Enoyl-[acyl-carrier-protein] reductase [NADPH]; fa	96.03
3v2h_A	281	D-beta-hydroxybutyrate dehydrogenase; structural g	96.02
3m1a_A	281	Putative dehydrogenase; short, PSI, MCSG, structur	96.02
1w6u_A	302	2,4-dienoyl-COA reductase, mitochondrial precursor	96.01
3d3w_A	244	L-xylulose reductase; uronate cycle, short-chain d	96.01
1vl8_A	267	Gluconate 5-dehydrogenase; TM0441, structural geno	96.01
1lss_A	140	TRK system potassium uptake protein TRKA homolog;	96.0
2bgk_A	278	Rhizome secoisolariciresinol dehydrogenase; oxidor	96.0
2pnf_A	248	3-oxoacyl-[acyl-carrier-protein] reductase; short	95.99
4hkt_A	331	Inositol 2-dehydrogenase; structural genomics, nys	95.99
3ftp_A	270	3-oxoacyl-[acyl-carrier protein] reductase; ssgcid	95.98
4ibo_A	271	Gluconate dehydrogenase; enzyme function initiativ	95.96
1hxh_A	253	3BETA/17BETA-hydroxysteroid dehydrogenase; alpha-b	95.96
1nff_A	260	Putative oxidoreductase RV2002; directed evolution	95.96
3l77_A	235	Short-chain alcohol dehydrogenase; oxidoreductase;	95.96
1zk4_A	251	R-specific alcohol dehydrogenase; short chain redu	95.96
1zem_A	262	Xylitol dehydrogenase; rossmann fold, dinucleotide	95.95
1sby_A	254	Alcohol dehydrogenase; ternary complex, NAD, trifl	95.95
2ehd_A	234	Oxidoreductase, oxidoreductase, short-chain dehydr	95.93
3rc1_A	350	Sugar 3-ketoreductase; sugar biosynthesis, TDP bin	95.92
2o23_A	265	HADH2 protein; HSD17B10, schad, ERAB, type II HADH	95.92
3pwz_A	272	Shikimate dehydrogenase 3; alpha-beta, oxidoreduct	95.91
3awd_A	260	GOX2181, putative polyol dehydrogenase; oxidoreduc	95.9
3ujc_A	266	Phosphoethanolamine N-methyltransferase; parasite;	95.9
1kpg_A	287	CFA synthase;, cyclopropane-fatty-acyl-phospholipi	95.9
2egg_A	297	AROE, shikimate 5-dehydrogenase; dimer, X-RAY diff	95.89
1fbn_A	230	MJ fibrillarin homologue; MJ proteins, ribosomal R	95.89
3tpc_A	257	Short chain alcohol dehydrogenase-related dehydro;	95.89
4imr_A	275	3-oxoacyl-(acyl-carrier-protein) reductase; oxidor	95.86
2c07_A	285	3-oxoacyl-(acyl-carrier protein) reductase; oxidor	95.85
2qq5_A	260	DHRS1, dehydrogenase/reductase SDR family member 1	95.85
3ezy_A	344	Dehydrogenase; structural genomics, unknown functi	95.84
4dmm_A	269	3-oxoacyl-[acyl-carrier-protein] reductase; rossma	95.84
1fmc_A	255	7 alpha-hydroxysteroid dehydrogenase; short-chain	95.84
1mxh_A	276	Pteridine reductase 2; SDR topology, protein-subst	95.83
3tzq_B	271	Short-chain type dehydrogenase/reductase; ssgcid,	95.8
3edm_A	259	Short chain dehydrogenase; structural genomics, ox	95.78
3ek2_A	271	Enoyl-(acyl-carrier-protein) reductase (NADH); ssg	95.77
2glx_A	332	1,5-anhydro-D-fructose reductase; NADP(H) dependen	95.76
2uvd_A	246	3-oxoacyl-(acyl-carrier-protein) reductase; beta-k	95.76
4e3z_A	272	Putative oxidoreductase protein; PSI-biology, stru	95.75
1xu9_A	286	Corticosteroid 11-beta-dehydrogenase, isozyme 1; h	95.75
2zat_A	260	Dehydrogenase/reductase SDR family member 4; alpha	95.73
3o38_A	266	Short chain dehydrogenase; tuberculosis, ortholog	95.72
1vl6_A	388	Malate oxidoreductase; TM0542, NAD-dependent malic	95.71
1zmt_A	254	Haloalcohol dehalogenase HHEC; halohydrin dehaloge	95.71
3vtz_A	269	Glucose 1-dehydrogenase; rossmann fold, oxidoreduc	95.71
2gn4_A	344	FLAA1 protein, UDP-GLCNAC C6 dehydratase; rossmann	95.71
2gdz_A	267	NAD+-dependent 15-hydroxyprostaglandin dehydrogen;	95.7
3sx2_A	278	Putative 3-ketoacyl-(acyl-carrier-protein) reduct;	95.7
3uve_A	286	Carveol dehydrogenase ((+)-trans-carveol dehydrog;	95.69
3q2i_A	354	Dehydrogenase; rossmann fold, UDP-sugar binding, N	95.69
1x1t_A	260	D(-)-3-hydroxybutyrate dehydrogenase; NAD, NADH, S	95.69
4fc7_A	277	Peroxisomal 2,4-dienoyl-COA reductase; SDR/rossman	95.69
4h15_A	261	Short chain alcohol dehydrogenase-related dehydro;	95.69
1npy_A	271	Hypothetical shikimate 5-dehydrogenase-like protei	95.68
3ou2_A	218	SAM-dependent methyltransferase; O-methyltransfera	95.68
3pgx_A	280	Carveol dehydrogenase; structural genomics, seattl	95.68
1yxm_A	303	Pecra, peroxisomal trans 2-enoyl COA reductase; pe	95.67
4da9_A	280	Short-chain dehydrogenase/reductase; structural ge	95.67
2bd0_A	244	Sepiapterin reductase; oxidoreductase; HET: NAP BI	95.66
3u0b_A	454	Oxidoreductase, short chain dehydrogenase/reducta	95.66
2q2v_A	255	Beta-D-hydroxybutyrate dehydrogenase; SDR, oxidore	95.65
1nkv_A	256	Hypothetical protein YJHP; structural genomics, PS	95.65
2pd4_A	275	Enoyl-[acyl-carrier-protein] reductase [NADH]; ant	95.65
1l3i_A	192	Precorrin-6Y methyltransferase/putative decarboxyl	95.64
3db2_A	354	Putative NADPH-dependent oxidoreductase; two domai	95.63
4iin_A	271	3-ketoacyl-acyl carrier protein reductase (FABG);	95.63
3s55_A	281	Putative short-chain dehydrogenase/reductase; stru	95.63
3ksu_A	262	3-oxoacyl-acyl carrier protein reductase; structur	95.62
3i4f_A	264	3-oxoacyl-[acyl-carrier protein] reductase; struct	95.62
3kvo_A	346	Hydroxysteroid dehydrogenase-like protein 2; HSDL2	95.62
2avd_A	229	Catechol-O-methyltransferase; structural genomics,	95.62
3e9m_A	330	Oxidoreductase, GFO/IDH/MOCA family; GFO/LDH/MOCA,	95.6
3l9w_A	413	Glutathione-regulated potassium-efflux system Pro	95.59
3adn_A	294	Spermidine synthase; aminopropyltransferase, polya	95.59
4iiu_A	267	3-oxoacyl-[acyl-carrier protein] reductase; struct	95.58
1ixk_A	315	Methyltransferase; open beta sheet; 1.90A {Pyrococ	95.57
3nrc_A	280	Enoyl-[acyl-carrier-protein] reductase (NADH); ros	95.57
3sc4_A	285	Short chain dehydrogenase (A0QTM2 homolog); ssgcid	95.57
1r18_A	227	Protein-L-isoaspartate(D-aspartate)-O-methyltrans;	95.56
3t4x_A	267	Oxidoreductase, short chain dehydrogenase/reducta;	95.56
3kzv_A	254	Uncharacterized oxidoreductase YIR035C; cytoplasmi	95.56
3tnl_A	315	Shikimate dehydrogenase; structural genomics, cent	95.55
2wyu_A	261	Enoyl-[acyl carrier protein] reductase; oxidoreduc	95.55
1i1n_A	226	Protein-L-isoaspartate O-methyltransferase; S-aden	95.55
1spx_A	278	Short-chain reductase family member (5L265); paral	95.53
2fwm_X	250	2,3-dihydro-2,3-dihydroxybenzoate dehydrogenase; e	95.52
1cyd_A	244	Carbonyl reductase; short-chain dehydrogenase, oxi	95.5
3a28_C	258	L-2.3-butanediol dehydrogenase; chiral substrate r	95.5
2cfc_A	250	2-(R)-hydroxypropyl-COM dehydrogenase; NAD, oxidor	95.49
3euw_A	344	MYO-inositol dehydrogenase; protein structure init	95.48
3e48_A	289	Putative nucleoside-diphosphate-sugar epimerase; a	95.48
1edo_A	244	Beta-keto acyl carrier protein reductase; nucleoti	95.48
3o8q_A	281	Shikimate 5-dehydrogenase I alpha; structural geno	95.47
3pxx_A	287	Carveol dehydrogenase; structural genomics, seattl	95.47
3phh_A	269	Shikimate dehydrogenase; shikimate pathway, helico	95.47
3tfw_A	248	Putative O-methyltransferase; PSI-biology, nysgrc,	95.46
2p91_A	285	Enoyl-[acyl-carrier-protein] reductase [NADH]; NAD	95.45
3osu_A	246	3-oxoacyl-[acyl-carrier-protein] reductase; struct	95.42
3tsc_A	277	Putative oxidoreductase; structural genomics, seat	95.42
3t7c_A	299	Carveol dehydrogenase; structural genomics, seattl	95.41
1gee_A	261	Glucose 1-dehydrogenase; short-chain dehydrogenase	95.4
2h7i_A	269	Enoyl-[acyl-carrier-protein] reductase [NADH]; oxi	95.39
4df3_A	233	Fibrillarin-like rRNA/TRNA 2'-O-methyltransferase;	95.38
3h2s_A	224	Putative NADH-flavin reductase; Q03B84, NESG, LCR1	95.37
1e7w_A	291	Pteridine reductase; dihydrofolate reductase, shor	95.37
1iy9_A	275	Spermidine synthase; rossmann fold, structural gen	95.33
3tl3_A	257	Short-chain type dehydrogenase/reductase; ssgcid,	95.33
3ajd_A	274	Putative methyltransferase MJ0026; tRNA, M5C, ross	95.32
2axq_A	467	Saccharopine dehydrogenase; rossmann fold variant,	95.32
3h8v_A	292	Ubiquitin-like modifier-activating enzyme 5; rossm	95.31
4hp8_A	247	2-deoxy-D-gluconate 3-dehydrogenase; enzyme functi	95.3
3ppi_A	281	3-hydroxyacyl-COA dehydrogenase type-2; ssgcid, de	95.3
2qhx_A	328	Pteridine reductase 1; oxidoreductase, short-chain	95.29
3orf_A	251	Dihydropteridine reductase; alpha-beta-alpha sandw	95.28
4fb5_A	393	Probable oxidoreductase protein; PSI-biology, nysg	95.28
1u2z_A	433	Histone-lysine N-methyltransferase, H3 lysine-79 s	95.27
3afn_B	258	Carbonyl reductase; alpha/beta/alpha, rossmann-fol	95.27
2nm0_A	253	Probable 3-oxacyl-(acyl-carrier-protein) reductas;	95.25
2dtx_A	264	Glucose 1-dehydrogenase related protein; rossmann	95.25
3m4x_A	456	NOL1/NOP2/SUN family protein; mtase domain, PUA do	95.24
3dhn_A	227	NAD-dependent epimerase/dehydratase; reductase, PF	95.22
1vbf_A	231	231AA long hypothetical protein-L-isoaspartate O-	95.22
2hq1_A	247	Glucose/ribitol dehydrogenase; CTH-1438, structura	95.21
3g0o_A	303	3-hydroxyisobutyrate dehydrogenase; NAD(P), valine	95.21
1ej0_A	180	FTSJ; methyltransferase, adoMet, adenosyl methioni	95.2
3duw_A	223	OMT, O-methyltransferase, putative; alternating of	95.19
1vl5_A	260	Unknown conserved protein BH2331; putative methylt	95.17
3uwp_A	438	Histone-lysine N-methyltransferase, H3 lysine-79;	95.16
1oaa_A	259	Sepiapterin reductase; tetrahydrobiopterin, oxidor	95.15
1pjz_A	203	Thiopurine S-methyltransferase; polymorphism, S-ad	95.15
1yb2_A	275	Hypothetical protein TA0852; structural genomics,	95.14
2x9g_A	288	PTR1, pteridine reductase; short chain dehydrogena	95.14
4ina_A	405	Saccharopine dehydrogenase; structural genomics, P	95.14
3e03_A	274	Short chain dehydrogenase; structural genomics, PS	95.13
2ph3_A	245	3-oxoacyl-[acyl carrier protein] reductase; TTHA04	95.12
3d64_A	494	Adenosylhomocysteinase; structural genomics, ssgci	95.11
1mjf_A	281	Spermidine synthase; spermidine synthetase, struct	95.1
1qsg_A	265	Enoyl-[acyl-carrier-protein] reductase; enoyl redu	95.1
3oec_A	317	Carveol dehydrogenase (mytha.01326.C, A0R518 HOMO;	95.09
3guy_A	230	Short-chain dehydrogenase/reductase SDR; structura	95.09
3rku_A	287	Oxidoreductase YMR226C; substrate fingerprint, sho	95.07
1ja9_A	274	4HNR, 1,3,6,8-tetrahydroxynaphthalene reductase; p	95.07
4gqa_A	412	NAD binding oxidoreductase; structural genomics, P	95.06
3vc1_A	312	Geranyl diphosphate 2-C-methyltransferase; rossman	95.05
3ezl_A	256	Acetoacetyl-COA reductase; ssgcid, acetyacetyl-COA	95.05
3e9n_A	245	Putative short-chain dehydrogenase/reductase; stru	95.05
1zh8_A	340	Oxidoreductase; TM0312, structural genomics, JO ce	95.04
1gz6_A	319	Estradiol 17 beta-dehydrogenase 4; 17BETA-HSD4, MF	95.03
2i7c_A	283	Spermidine synthase; transferase, structural genom	95.02
1h5q_A	265	NADP-dependent mannitol dehydrogenase; oxidoreduct	95.01
3qvo_A	236	NMRA family protein; structural genomics, PSI-biol	95.01
3evn_A	329	Oxidoreductase, GFO/IDH/MOCA family; structural ge	95.01
2gb4_A	252	Thiopurine S-methyltransferase; 18204406, thiopuri	95.0
2b2c_A	314	Spermidine synthase; beta-alpha, transferase; 2.50	95.0
1v8b_A	479	Adenosylhomocysteinase; hydrolase; HET: NAD ADN; 2	94.99
4dll_A	320	2-hydroxy-3-oxopropionate reductase; structural ge	94.99
3asu_A	248	Short-chain dehydrogenase/reductase SDR; SDR famil	94.98
3s8m_A	422	Enoyl-ACP reductase; rossmann fold, oxidoreductase	94.98
3qlj_A	322	Short chain dehydrogenase; structural genomics, se	94.97
3u9l_A	324	3-oxoacyl-[acyl-carrier-protein] reductase; struct	94.96
1zud_1	251	Adenylyltransferase THIF; thiamin, thiazole, prote	94.96
2yxl_A	450	PH0851 protein, 450AA long hypothetical FMU protei	94.94
3pef_A	287	6-phosphogluconate dehydrogenase, NAD-binding; gam	94.93
2o07_A	304	Spermidine synthase; structural genomics, structur	94.93
3dqp_A	219	Oxidoreductase YLBE; alpha-beta protein., structur	94.89
2h78_A	302	Hibadh, 3-hydroxyisobutyrate dehydrogenase; APC601	94.87
1xq6_A	253	Unknown protein; structural genomics, protein stru	94.86
1inl_A	296	Spermidine synthase; beta-barrel, rossman fold, st	94.84
1zmo_A	244	Halohydrin dehalogenase; haloalcohol dehalogenase,	94.84
3orh_A	236	Guanidinoacetate N-methyltransferase; structura ge	94.82
1xxl_A	239	YCGJ protein; structural genomics, protein structu	94.8
1vpd_A	299	Tartronate semialdehyde reductase; structural geno	94.79
3ohs_X	334	Trans-1,2-dihydrobenzene-1,2-DIOL dehydrogenase; d	94.76
3gk3_A	269	Acetoacetyl-COA reductase; acetoacetyl-CO reductas	94.76
2ixa_A	444	Alpha-N-acetylgalactosaminidase; NAD, A-ECO conver	94.74
1id1_A	153	Putative potassium channel protein; RCK domain, E.	94.73
3nzo_A	399	UDP-N-acetylglucosamine 4,6-dehydratase; structura	94.71
1nt2_A	210	Fibrillarin-like PRE-rRNA processing protein; adeM	94.69
1dhr_A	241	Dihydropteridine reductase; oxidoreductase(acting	94.67
3bus_A	273	REBM, methyltransferase; rebeccamycin synthesis; H	94.67
2jl1_A	287	Triphenylmethane reductase; oxidoreductase, biorem	94.66
3un1_A	260	Probable oxidoreductase; structural genomics, PSI-	94.66
1wwk_A	307	Phosphoglycerate dehydrogenase; riken structural g	94.65
3ggo_A	314	Prephenate dehydrogenase; TYRA, HPP, NADH, alpha-b	94.64
2pt6_A	321	Spermidine synthase; transferase, structural genom	94.61
1ooe_A	236	Dihydropteridine reductase; structural genomics, P	94.61
3bwc_A	304	Spermidine synthase; SAM, SGPP, structura genomics	94.58
2z5l_A	511	Tylkr1, tylactone synthase starter module and modu	94.57
3m33_A	226	Uncharacterized protein; structural genomics, PSI-	94.54
2nwq_A	272	Probable short-chain dehydrogenase; oxidoreductase	94.54
1g8a_A	227	Fibrillarin-like PRE-rRNA processing protein; rRNA	94.53
2pxx_A	215	Uncharacterized protein MGC2408; structural genomi	94.52
1xj5_A	334	Spermidine synthase 1; structural genomics, protei	94.49
1hdo_A	206	Biliverdin IX beta reductase; foetal metabolism, H	94.49
2o57_A	297	Putative sarcosine dimethylglycine methyltransfera	94.48
3g5t_A	299	Trans-aconitate 3-methyltransferase; structural ge	94.47
2gas_A	307	Isoflavone reductase; NADPH-dependent reductase, o	94.44
3doj_A	310	AT3G25530, dehydrogenase-like protein; gamma-hydro	94.44
3cbg_A	232	O-methyltransferase; cyanobacterium; HET: SAH FER	94.44
1ff9_A	450	Saccharopine reductase; lysine biosynthesis, alpha	94.43
3zu3_A	405	Putative reductase YPO4104/Y4119/YP_4011; oxidored	94.43
2frx_A	479	Hypothetical protein YEBU; rossmann-type S-adenosy	94.42
3g89_A	249	Ribosomal RNA small subunit methyltransferase G; 1	94.42
3qp9_A	525	Type I polyketide synthase pikaii; rossmann fold,	94.41
2p35_A	259	Trans-aconitate 2-methyltransferase; SAM dependent	94.4
3l4b_C	218	TRKA K+ channel protien TM1088B; potassium channel	94.4
3ctm_A	279	Carbonyl reductase; alcohol dehydrogenase, short-c	94.39
3moi_A	387	Probable dehydrogenase; structural genomics, PSI2,	94.39
2g5c_A	281	Prephenate dehydrogenase; TYRA, oxidoreductase; HE	94.39
2j6i_A	364	Formate dehydrogenase; oxidoreductase, D-specific-	94.37
1yzh_A	214	TRNA (guanine-N(7)-)-methyltransferase; alpha-beta	94.37
4h3v_A	390	Oxidoreductase domain protein; structural genomics	94.33
2ekl_A	313	D-3-phosphoglycerate dehydrogenase; structural gen	94.33
3tr6_A	225	O-methyltransferase; cellular processes; HET: SAH;	94.33
1lu9_A	287	Methylene tetrahydromethanopterin dehydrogenase; a	94.31
3m6w_A	464	RRNA methylase; rRNA methyltransferase, 5-methylcy	94.31
2fca_A	213	TRNA (guanine-N(7)-)-methyltransferase; 2.10A {Bac	94.3
1qyd_A	313	Pinoresinol-lariciresinol reductase; NADPH-depende	94.28
1uir_A	314	Polyamine aminopropyltransferase; spermidien synth	94.27
3i6i_A	346	Putative leucoanthocyanidin reductase 1; rossmann	94.27
2dbq_A	334	Glyoxylate reductase; D-3-phosphoglycerate dehydro	94.24
3icc_A	255	Putative 3-oxoacyl-(acyl carrier protein) reducta;	94.24
1sqg_A	429	SUN protein, FMU protein; rossmann-fold, mixed bet	94.23
2nvw_A	479	Galactose/lactose metabolism regulatory protein GA	94.2
3kkz_A	267	Uncharacterized protein Q5LES9; putative methyltra	94.18
3f4k_A	257	Putative methyltransferase; structural genomics, P	94.18
3e82_A	364	Putative oxidoreductase; NAD, GFO/IDH/MOCA family,	94.17
4ggo_A	401	Trans-2-enoyl-COA reductase; rossmann fold, oxidor	94.16
4eue_A	418	Putative reductase CA_C0462; TER, biofuel, synthet	94.15
1dus_A	194	MJ0882; hypothetical protein, methanococcus jannas	94.14
2g76_A	335	3-PGDH, D-3-phosphoglycerate dehydrogenase; oxidor	94.13
3kux_A	352	Putative oxidoreductase; oxidoreductase family, cs	94.13
3hdj_A	313	Probable ornithine cyclodeaminase; APC62486, borde	94.13
3iv6_A	261	Putative Zn-dependent alcohol dehydrogenase; alpha	94.1
3id6_C	232	Fibrillarin-like rRNA/TRNA 2'-O-methyltransferase;	94.09
1fjh_A	257	3alpha-hydroxysteroid dehydrogenase/carbonyl reduc	94.07
3gdo_A	358	Uncharacterized oxidoreductase YVAA; structural ge	94.07
3g07_A	292	7SK snRNA methylphosphate capping enzyme; structur	94.06
3mz0_A	344	Inositol 2-dehydrogenase/D-chiro-inositol 3-dehyd;	94.04
3sm3_A	235	SAM-dependent methyltransferases; NESG, structural	93.96
1uzm_A	247	3-oxoacyl-[acyl-carrier protein] reductase; beta-k	93.96
4e12_A	283	Diketoreductase; oxidoreductase, NADH; HET: 1PE; 1	93.94
4gek_A	261	TRNA (CMO5U34)-methyltransferase; structural genom	93.93
3uxy_A	266	Short-chain dehydrogenase/reductase SDR; structura	93.92
3ruf_A	351	WBGU; rossmann fold, UDP-hexose 4-epimerase, isome	93.92
1qyc_A	308	Phenylcoumaran benzylic ether reductase PT1; NADPH	93.9
3c3y_A	237	Pfomt, O-methyltransferase; plant secondary metabo	93.9
3uce_A	223	Dehydrogenase; rossmann fold, oxidoreductase; HET:	93.89
2yut_A	207	Putative short-chain oxidoreductase; alpha and bet	93.88
2z1m_A	345	GDP-D-mannose dehydratase; short-chain dehydrogena	93.86
1y1p_A	342	ARII, aldehyde reductase II; rossmann fold, short	93.84
3ec7_A	357	Putative dehydrogenase; alpha-beta, structural gen	93.79
1sui_A	247	Caffeoyl-COA O-methyltransferase; rossmann fold, p	93.76
2nac_A	393	NAD-dependent formate dehydrogenase; oxidoreductas	93.73
2fr1_A	486	Erythromycin synthase, eryai; short chain dehydrog	93.68
3jtm_A	351	Formate dehydrogenase, mitochondrial; mitochondrio	93.66
3btv_A	438	Galactose/lactose metabolism regulatory protein GA	93.66
2dkn_A	255	3-alpha-hydroxysteroid dehydrogenase; oxidoreducta	93.61
3slg_A	372	PBGP3 protein; structural genomics, seattle struct	93.6
1uay_A	242	Type II 3-hydroxyacyl-COA dehydrogenase; beta oxid	93.6
3dr5_A	221	Putative O-methyltransferase; Q8NRD3, CGL1119, PF0	93.59
3ius_A	286	Uncharacterized conserved protein; APC63810, silic	93.58
2cmg_A	262	Spermidine synthase; transferase, putrescine amino	93.57
3d7l_A	202	LIN1944 protein; APC89317, structural genomics, PS	93.57
1ydw_A	362	AX110P-like protein; structural genomics, protein	93.56
2a9f_A	398	Putative malic enzyme ((S)-malate:NAD+ oxidoreduct	93.54
2aef_A	234	Calcium-gated potassium channel MTHK; rossmann fol	93.52
3i23_A	349	Oxidoreductase, GFO/IDH/MOCA family; structural ge	93.52
2ho3_A	325	Oxidoreductase, GFO/IDH/MOCA family; streptococcus	93.51
3e23_A	211	Uncharacterized protein RPA2492; alpha-beta protei	93.5
2gcg_A	330	Glyoxylate reductase/hydroxypyruvate reductase; NA	93.49
4e4y_A	244	Short chain dehydrogenase family protein; structur	93.46
3dli_A	240	Methyltransferase; PSI-II, NYSGXRC, structural gen	93.46
3fhl_A	362	Putative oxidoreductase; NAD-binding domain, PSI-2	93.46
1p9l_A	245	Dihydrodipicolinate reductase; oxidoreductase, lys	93.44
3gg9_A	352	D-3-phosphoglycerate dehydrogenase oxidoreductase;	93.42
2et6_A	604	(3R)-hydroxyacyl-COA dehydrogenase; MFE-2, beta-ox	93.41
4e21_A	358	6-phosphogluconate dehydrogenase (decarboxylating;	93.37
3mgg_A	276	Methyltransferase; NYSGXRC, PSI-II, protein struct	93.37
3dxy_A	218	TRNA (guanine-N(7)-)-methyltransferase; rossmann f	93.37

>3m6i_A L-arabinitol 4-dehydrogenase; medium chain dehydrogenase/reductase, oxidoreductase; HET: NAD; 2.60A {Neurospora crassa}

Probab=100.00  E-value=2.6e-60  Score=438.06  Aligned_cols=345  Identities=40%  Similarity=0.653  Sum_probs=310.2

Q ss_pred             chhcceeEEEecCCceEEEEecCC--------CCCCCcEEEEEeeeeeCcccHhhhhccccCCccCCCCcccCccceEEE
Q 017868           14 GEEVNMAAWLLGVNTLKIQPFELP--------SLGPYDVLVRMKAVGICGSDVHYLKTLRCADFVVKEPMVIGHECAGVI   85 (365)
Q Consensus        14 ~~~~~~~~~~~~~~~l~~~~~~~p--------~~~~~eVlI~v~~~~l~~~D~~~~~g~~~~~~~~~~p~~~G~e~~G~V   85 (365)
                      ++++|+++++.+++.+++.++|.|        +|+++||+|||.++++|++|++.+.+...+.....+|.++|||++|+|
T Consensus         5 ~~~~mka~~~~~~~~l~~~~~~~P~~~~~~~~~~~~~eVlVkv~a~gi~~~D~~~~~~~~~~~~~~~~p~v~G~E~~G~V   84 (363)
T 3m6i_A            5 ASKTNIGVFTNPQHDLWISEASPSLESVQKGEELKEGEVTVAVRSTGICGSDVHFWKHGCIGPMIVECDHVLGHESAGEV   84 (363)
T ss_dssp             CCSCCEEEEECTTCCEEEEECSSCHHHHHHTCSCCTTEEEEEEEEEECCHHHHHHHHHSBSSSCBCCSCEECCCEEEEEE
T ss_pred             CcccceeEEEeCCCcEEEEEecCCccccccCCCcCCCeEEEEEeEEeecHhhHHHHcCCCCCCccCCCCcccCcceEEEE
Confidence            557799999999999999999999        999999999999999999999988865444444577999999999999


Q ss_pred             EEeCCCCCCCCCCCEEEEcCCcCCCCCccccCCCCCCCCCccccccCCCCcceeeEEeecCCceEECCCCCCcchhccch
Q 017868           86 EKVGSEVKTLVPGDRVALEPGISCWRCDHCKGGRYNLCPEMKFFATPPVHGSLANQVVHPADLCFKLPDNVSLEEGAMCE  165 (365)
Q Consensus        86 ~~vG~~v~~~~~Gd~V~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~v~~~~~~~iP~~~~~~~a~~~~  165 (365)
                      +++|++|++|++||||++.+..+|++|.+|+.+.+++|.+..+.+....+|+|+||+++++++++++|+ +++++|+++.
T Consensus        85 ~~vG~~v~~~~vGdrV~~~~~~~cg~C~~c~~g~~~~c~~~~~~g~~~~~G~~aey~~v~~~~~~~iP~-~s~~~aa~~~  163 (363)
T 3m6i_A           85 IAVHPSVKSIKVGDRVAIEPQVICNACEPCLTGRYNGCERVDFLSTPPVPGLLRRYVNHPAVWCHKIGN-MSYENGAMLE  163 (363)
T ss_dssp             EEECTTCCSCCTTCEEEECCEECCSCSHHHHTTCGGGCTTCEETTSTTSCCSCBSEEEEEGGGEEECTT-CCHHHHHHHH
T ss_pred             EEECCCCCCCCCCCEEEEecccCCCCCHHHHCcCcccCCCccccCCCCCCccceeEEEEehhhEEECCC-CCHHHHHhhh
Confidence            999999999999999999999999999999999999999998888766789999999999999999999 9999999888


Q ss_pred             hhHHHHHHHHhcCCCCCCEEEEEcCCHHHHHHHHHHHHHCCCCeEEEEeCChhHHHHHHHcCCCEEEeCCC---CcccHH
Q 017868          166 PLSVGLHACRRANIGPETNVLIMGAGPIGLVTMLGAPRAFGAPRIVIVDVDDYRLSVAKEIGADNIVKVST---NLQDIA  242 (365)
Q Consensus       166 ~~~~a~~~~~~~~~~~g~~vlI~G~g~~G~~ai~~l~~~~g~~~vi~v~~~~~~~~~~~~~g~~~~~~~~~---~~~~~~  242 (365)
                      +++|||++++.+++++|++|||+|+|++|++++| +++.+|+++|++++++++|.++++++ ++.++++..   ..+++.
T Consensus       164 ~~~ta~~~l~~~~~~~g~~VlV~GaG~vG~~aiq-lak~~Ga~~Vi~~~~~~~~~~~a~~l-~~~~~~~~~~~~~~~~~~  241 (363)
T 3m6i_A          164 PLSVALAGLQRAGVRLGDPVLICGAGPIGLITML-CAKAAGACPLVITDIDEGRLKFAKEI-CPEVVTHKVERLSAEESA  241 (363)
T ss_dssp             HHHHHHHHHHHHTCCTTCCEEEECCSHHHHHHHH-HHHHTTCCSEEEEESCHHHHHHHHHH-CTTCEEEECCSCCHHHHH
T ss_pred             HHHHHHHHHHHcCCCCCCEEEEECCCHHHHHHHH-HHHHcCCCEEEEECCCHHHHHHHHHh-chhcccccccccchHHHH
Confidence            8999999998899999999999999999999999 99999997799999999999999999 766555432   235666


Q ss_pred             HHHHHHHHHhCCCceEEEeCCCCHHHHHHHHHhcccCCEEEEEccCCCCccccchHhhhcCcEEEeecccCCcHHHHHHH
Q 017868          243 EEVEKIQKAMGTGIDVSFDCAGLNKTMSTALGATCAGGKVCLVGMGHHEMTVPLTPAAVREVDVVGVFRYKNTWPLCLEL  322 (365)
Q Consensus       243 ~~i~~~~~~~~~~~d~vid~~g~~~~~~~~~~~l~~~G~~~~~g~~~~~~~~~~~~~~~~~~~i~~~~~~~~~~~~~~~~  322 (365)
                      +.+++.+  .+.++|+|||++|.+..+..++++|+++|+++.+|.......++...+..+++++.+++.+.+.+++++++
T Consensus       242 ~~v~~~t--~g~g~Dvvid~~g~~~~~~~~~~~l~~~G~iv~~G~~~~~~~~~~~~~~~~~~~i~g~~~~~~~~~~~~~l  319 (363)
T 3m6i_A          242 KKIVESF--GGIEPAVALECTGVESSIAAAIWAVKFGGKVFVIGVGKNEIQIPFMRASVREVDLQFQYRYCNTWPRAIRL  319 (363)
T ss_dssp             HHHHHHT--SSCCCSEEEECSCCHHHHHHHHHHSCTTCEEEECCCCCSCCCCCHHHHHHHTCEEEECCSCSSCHHHHHHH
T ss_pred             HHHHHHh--CCCCCCEEEECCCChHHHHHHHHHhcCCCEEEEEccCCCCccccHHHHHhcCcEEEEccCCHHHHHHHHHH
Confidence            6666654  26799999999998878899999999999999999766655666777899999999998888899999999


Q ss_pred             HHcCCCCCCCceEEEecCChhhHHHHHHHHhcC-CCceEEEEeC
Q 017868          323 LRSGKIDVKPLVTHRFGFSQKEVEEAFETSARG-GTAIKVMFNL  365 (365)
Q Consensus       323 l~~g~~~~~~~~~~~~~~~~~~~~~a~~~~~~~-~~~gk~vi~~  365 (365)
                      +++|++.+.+.++++|+|  +++.+|++.++++ ...+|+||++
T Consensus       320 ~~~g~i~~~~~i~~~~~l--~~~~~A~~~~~~~~~~~~Kvvi~~  361 (363)
T 3m6i_A          320 VENGLVDLTRLVTHRFPL--EDALKAFETASDPKTGAIKVQIQS  361 (363)
T ss_dssp             HHTTSSCCGGGEEEEEEG--GGHHHHHHHHHCGGGCCSEEEEEC
T ss_pred             HHhCCCChHHceeeeeeH--HHHHHHHHHHhccCCCeEEEEEec
Confidence            999999888889999999  9999999999987 6889999874

>1pl8_A Human sorbitol dehydrogenase; NAD, oxidoreductase; HET: NAD; 1.90A {Homo sapiens} SCOP: b.35.1.2 c.2.1.1 PDB: 1pl7_A 1pl6_A* 3qe3_A

Probab=100.00  E-value=3e-59  Score=429.51  Aligned_cols=344  Identities=49%  Similarity=0.859  Sum_probs=304.2

Q ss_pred             hhcceeEEEecCCceEEEEecCCCCCCCcEEEEEeeeeeCcccHhhhhccccCCccCCCCcccCccceEEEEEeCCCCCC
Q 017868           15 EEVNMAAWLLGVNTLKIQPFELPSLGPYDVLVRMKAVGICGSDVHYLKTLRCADFVVKEPMVIGHECAGVIEKVGSEVKT   94 (365)
Q Consensus        15 ~~~~~~~~~~~~~~l~~~~~~~p~~~~~eVlI~v~~~~l~~~D~~~~~g~~~~~~~~~~p~~~G~e~~G~V~~vG~~v~~   94 (365)
                      +++||++++.+++.+++.++|.|+|+++||+|||.++++|++|++.+.|...+.....+|.++|||++|+|+++|++|++
T Consensus         5 ~~~mka~~~~~~~~l~~~~~~~P~~~~~eVlVkv~a~gi~~~D~~~~~g~~~~~~~~~~p~v~G~E~~G~V~~vG~~V~~   84 (356)
T 1pl8_A            5 KPNNLSLVVHGPGDLRLENYPIPEPGPNEVLLRMHSVGICGSDVHYWEYGRIGNFIVKKPMVLGHEASGTVEKVGSSVKH   84 (356)
T ss_dssp             CCCCEEEEEEETTEEEEEECCCCCCCTTEEEEEEEEEEECHHHHHHHHHSEETTEECSSCEECCCEEEEEEEEECTTCCS
T ss_pred             ccCceEEEEecCCcEEEEEccCCCCCCCeEEEEEEEeeeCHHHHHHHcCCCCCCccCCCCcccccceEEEEEEECCCCCC
Confidence            45689999999999999999999999999999999999999999988754322222457899999999999999999999


Q ss_pred             CCCCCEEEEcCCcCCCCCccccCCCCCCCCCccccccCCCCcceeeEEeecCCceEECCCCCCcchhccchhhHHHHHHH
Q 017868           95 LVPGDRVALEPGISCWRCDHCKGGRYNLCPEMKFFATPPVHGSLANQVVHPADLCFKLPDNVSLEEGAMCEPLSVGLHAC  174 (365)
Q Consensus        95 ~~~Gd~V~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~v~~~~~~~iP~~~~~~~a~~~~~~~~a~~~~  174 (365)
                      |++||||++.+..+|++|++|+.+++++|++..+.+....+|+|+||+++++++++++|+++++++|+++.++.|||+++
T Consensus        85 ~~vGdrV~~~~~~~cg~C~~C~~g~~~~C~~~~~~g~~~~~G~~aey~~v~~~~~~~iP~~l~~~~aa~~~~~~ta~~al  164 (356)
T 1pl8_A           85 LKPGDRVAIEPGAPRENDEFCKMGRYNLSPSIFFCATPPDDGNLCRFYKHNAAFCYKLPDNVTFEEGALIEPLSVGIHAC  164 (356)
T ss_dssp             CCTTCEEEECSEECSSCCHHHHTTCGGGCTTCEETTBTTBCCSCBSEEEEEGGGEEECCTTSCHHHHHHHHHHHHHHHHH
T ss_pred             CCCCCEEEEeccCCCCCChHHHCcCcccCCCccccCcCCCCCccccEEEeehHHEEECcCCCCHHHHHhhchHHHHHHHH
Confidence            99999999999999999999999999999988777764457999999999999999999999999999887889999999


Q ss_pred             HhcCCCCCCEEEEEcCCHHHHHHHHHHHHHCCCCeEEEEeCChhHHHHHHHcCCCEEEeCCCC-cccHHHHHHHHHHHhC
Q 017868          175 RRANIGPETNVLIMGAGPIGLVTMLGAPRAFGAPRIVIVDVDDYRLSVAKEIGADNIVKVSTN-LQDIAEEVEKIQKAMG  253 (365)
Q Consensus       175 ~~~~~~~g~~vlI~G~g~~G~~ai~~l~~~~g~~~vi~v~~~~~~~~~~~~~g~~~~~~~~~~-~~~~~~~i~~~~~~~~  253 (365)
                      +.+++++|++|||+|+|++|++++| +++.+|+++|++++++++|.++++++|++.++++... ..++.+.+++.+   +
T Consensus       165 ~~~~~~~g~~VlV~GaG~vG~~aiq-lak~~Ga~~Vi~~~~~~~~~~~a~~lGa~~vi~~~~~~~~~~~~~i~~~~---~  240 (356)
T 1pl8_A          165 RRGGVTLGHKVLVCGAGPIGMVTLL-VAKAMGAAQVVVTDLSATRLSKAKEIGADLVLQISKESPQEIARKVEGQL---G  240 (356)
T ss_dssp             HHHTCCTTCEEEEECCSHHHHHHHH-HHHHTTCSEEEEEESCHHHHHHHHHTTCSEEEECSSCCHHHHHHHHHHHH---T
T ss_pred             HhcCCCCCCEEEEECCCHHHHHHHH-HHHHcCCCEEEEECCCHHHHHHHHHhCCCEEEcCcccccchHHHHHHHHh---C
Confidence            8889999999999999999999999 9999999789999999999999999999998876421 245555555543   4


Q ss_pred             CCceEEEeCCCCHHHHHHHHHhcccCCEEEEEccCCCCccccchHhhhcCcEEEeecccCCcHHHHHHHHHcCCCCCCCc
Q 017868          254 TGIDVSFDCAGLNKTMSTALGATCAGGKVCLVGMGHHEMTVPLTPAAVREVDVVGVFRYKNTWPLCLELLRSGKIDVKPL  333 (365)
Q Consensus       254 ~~~d~vid~~g~~~~~~~~~~~l~~~G~~~~~g~~~~~~~~~~~~~~~~~~~i~~~~~~~~~~~~~~~~l~~g~~~~~~~  333 (365)
                      .++|+|||++|....+..++++|+++|+++.+|.......++...+..+++++.+++.+...++++++++++|++.+.+.
T Consensus       241 ~g~D~vid~~g~~~~~~~~~~~l~~~G~iv~~G~~~~~~~~~~~~~~~~~~~i~g~~~~~~~~~~~~~l~~~g~i~~~~~  320 (356)
T 1pl8_A          241 CKPEVTIECTGAEASIQAGIYATRSGGTLVLVGLGSEMTTVPLLHAAIREVDIKGVFRYCNTWPVAISMLASKSVNVKPL  320 (356)
T ss_dssp             SCCSEEEECSCCHHHHHHHHHHSCTTCEEEECSCCCSCCCCCHHHHHHTTCEEEECCSCSSCHHHHHHHHHTTSCCCGGG
T ss_pred             CCCCEEEECCCChHHHHHHHHHhcCCCEEEEEecCCCCCccCHHHHHhcceEEEEecccHHHHHHHHHHHHcCCCChHHh
Confidence            78999999999877889999999999999999875444456666788999999998877788999999999999977888


Q ss_pred             eEEEecCChhhHHHHHHHHhcCCCceEEEEeC
Q 017868          334 VTHRFGFSQKEVEEAFETSARGGTAIKVMFNL  365 (365)
Q Consensus       334 ~~~~~~~~~~~~~~a~~~~~~~~~~gk~vi~~  365 (365)
                      ++++|+|  +++.+|++.++++ ..||+||++
T Consensus       321 i~~~~~l--~~~~~A~~~~~~~-~~gKvvi~~  349 (356)
T 1pl8_A          321 VTHRFPL--EKALEAFETFKKG-LGLKIMLKC  349 (356)
T ss_dssp             EEEEEEG--GGHHHHHHHHHTT-CCSEEEEEC
T ss_pred             eEEEecH--HHHHHHHHHHhCC-CceEEEEeC
Confidence            8999999  9999999999988 889999974

>1e3j_A NADP(H)-dependent ketose reductase; oxidoreductase, fructose reduction; 2.3A {Bemisia argentifolii} SCOP: b.35.1.2 c.2.1.1

Probab=100.00  E-value=6.8e-59  Score=426.67  Aligned_cols=346  Identities=48%  Similarity=0.832  Sum_probs=303.5

Q ss_pred             hhcceeEEEecCCceEEEEecCCCCCCCcEEEEEeeeeeCcccHhhhhccccCCccCCCCcccCccceEEEEEeCCCCCC
Q 017868           15 EEVNMAAWLLGVNTLKIQPFELPSLGPYDVLVRMKAVGICGSDVHYLKTLRCADFVVKEPMVIGHECAGVIEKVGSEVKT   94 (365)
Q Consensus        15 ~~~~~~~~~~~~~~l~~~~~~~p~~~~~eVlI~v~~~~l~~~D~~~~~g~~~~~~~~~~p~~~G~e~~G~V~~vG~~v~~   94 (365)
                      +++||++++.+++.++++++|.|+|+++||+|||.++++|++|++.+.+.........+|.++|||++|+|+++|++|++
T Consensus         2 ~~~mka~~~~~~~~l~~~~~~~P~~~~~eVlVkv~a~gi~~~D~~~~~~g~~~~~~~~~p~v~G~E~~G~V~~vG~~v~~   81 (352)
T 1e3j_A            2 ASDNLSAVLYKQNDLRLEQRPIPEPKEDEVLLQMAYVGICGSDVHYYEHGRIADFIVKDPMVIGHEASGTVVKVGKNVKH   81 (352)
T ss_dssp             --CCEEEEEEETTEEEEEECCCCCCCTTEEEEEEEEEEECHHHHHHHHHSBSSSCBCCSCEECCCEEEEEEEEECTTCCS
T ss_pred             cccCEEEEEEcCCcEEEEEecCCCCCCCeEEEEEEEEEEChhhHHHHcCCCCccccCCCCccccccceEEEEEeCCCCCC
Confidence            35689999999999999999999999999999999999999999988753322222457999999999999999999999


Q ss_pred             CCCCCEEEEcCCcCCCCCccccCCCCCCCCCccccccCCCCcceeeEEeecCCceEECCCCCCcchhccchhhHHHHHHH
Q 017868           95 LVPGDRVALEPGISCWRCDHCKGGRYNLCPEMKFFATPPVHGSLANQVVHPADLCFKLPDNVSLEEGAMCEPLSVGLHAC  174 (365)
Q Consensus        95 ~~~Gd~V~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~v~~~~~~~iP~~~~~~~a~~~~~~~~a~~~~  174 (365)
                      |++||||++.+..+|+.|++|+.+++++|++..+.+....+|+|+||+++++++++++|+++++++|+++.+++|||+++
T Consensus        82 ~~vGdrV~~~~~~~cg~C~~C~~g~~~~C~~~~~~g~~~~~G~~aey~~v~~~~~~~iP~~~~~~~aa~~~~~~ta~~al  161 (352)
T 1e3j_A           82 LKKGDRVAVEPGVPCRRCQFCKEGKYNLCPDLTFCATPPDDGNLARYYVHAADFCHKLPDNVSLEEGALLEPLSVGVHAC  161 (352)
T ss_dssp             CCTTCEEEECCEECCSSSHHHHTTCGGGCTTCEETTBTTBCCSCBSEEEEEGGGEEECCTTSCHHHHHTHHHHHHHHHHH
T ss_pred             CCCCCEEEEcCcCCCCCChhhhCcCcccCCCCcccCcCCCCccceeEEEeChHHeEECcCCCCHHHHHhhchHHHHHHHH
Confidence            99999999999999999999999999999998877764457999999999999999999999999999888899999999


Q ss_pred             HhcCCCCCCEEEEEcCCHHHHHHHHHHHHHCCCCeEEEEeCChhHHHHHHHcCCCEEEeCCCCcccHHHHHHHHHHH-hC
Q 017868          175 RRANIGPETNVLIMGAGPIGLVTMLGAPRAFGAPRIVIVDVDDYRLSVAKEIGADNIVKVSTNLQDIAEEVEKIQKA-MG  253 (365)
Q Consensus       175 ~~~~~~~g~~vlI~G~g~~G~~ai~~l~~~~g~~~vi~v~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~i~~~~~~-~~  253 (365)
                      +.+++++|++|||+|+|++|++++| +++.+|++ |+++++++++.++++++|++.++++.+ ..++.+.+++.+.. .+
T Consensus       162 ~~~~~~~g~~VlV~GaG~vG~~a~q-la~~~Ga~-Vi~~~~~~~~~~~~~~lGa~~~~~~~~-~~~~~~~i~~~~~~~~g  238 (352)
T 1e3j_A          162 RRAGVQLGTTVLVIGAGPIGLVSVL-AAKAYGAF-VVCTARSPRRLEVAKNCGADVTLVVDP-AKEEESSIIERIRSAIG  238 (352)
T ss_dssp             HHHTCCTTCEEEEECCSHHHHHHHH-HHHHTTCE-EEEEESCHHHHHHHHHTTCSEEEECCT-TTSCHHHHHHHHHHHSS
T ss_pred             HhcCCCCCCEEEEECCCHHHHHHHH-HHHHcCCE-EEEEcCCHHHHHHHHHhCCCEEEcCcc-cccHHHHHHHHhccccC
Confidence            8889999999999999999999999 99999995 889999999999999999999888642 14566666654310 14


Q ss_pred             CCceEEEeCCCCHHHHHHHHHhcccCCEEEEEccCCCCccccchHhhhcCcEEEeecccCCcHHHHHHHHHcCCCCCCCc
Q 017868          254 TGIDVSFDCAGLNKTMSTALGATCAGGKVCLVGMGHHEMTVPLTPAAVREVDVVGVFRYKNTWPLCLELLRSGKIDVKPL  333 (365)
Q Consensus       254 ~~~d~vid~~g~~~~~~~~~~~l~~~G~~~~~g~~~~~~~~~~~~~~~~~~~i~~~~~~~~~~~~~~~~l~~g~~~~~~~  333 (365)
                      .++|++||++|....+..++++|+++|+++.+|.......++...+..+++++.+++.+...++++++++++|++.+.+.
T Consensus       239 ~g~D~vid~~g~~~~~~~~~~~l~~~G~iv~~G~~~~~~~~~~~~~~~~~~~i~g~~~~~~~~~~~~~l~~~g~i~~~~~  318 (352)
T 1e3j_A          239 DLPNVTIDCSGNEKCITIGINITRTGGTLMLVGMGSQMVTVPLVNACAREIDIKSVFRYCNDYPIALEMVASGRCNVKQL  318 (352)
T ss_dssp             SCCSEEEECSCCHHHHHHHHHHSCTTCEEEECSCCSSCCCCCHHHHHTTTCEEEECCSCSSCHHHHHHHHHTTSCCCGGG
T ss_pred             CCCCEEEECCCCHHHHHHHHHHHhcCCEEEEEecCCCCccccHHHHHhcCcEEEEeccchHHHHHHHHHHHcCCCChHHh
Confidence            68999999999877889999999999999999875444455666788999999998877788999999999999977888


Q ss_pred             eEEEecCChhhHHHHHHHHhcCC-CceEEEEeC
Q 017868          334 VTHRFGFSQKEVEEAFETSARGG-TAIKVMFNL  365 (365)
Q Consensus       334 ~~~~~~~~~~~~~~a~~~~~~~~-~~gk~vi~~  365 (365)
                      ++++|+|  +++.+|++.+++++ ..+|+||++
T Consensus       319 i~~~~~l--~~~~~A~~~~~~~~~~~~Kvvi~~  349 (352)
T 1e3j_A          319 VTHSFKL--EQTVDAFEAARKKADNTIKVMISC  349 (352)
T ss_dssp             EEEEEEG--GGHHHHHHHHHHCCTTCSEEEEEC
T ss_pred             eeEEecH--HHHHHHHHHHhcCCCCceEEEEec
Confidence            8999999  99999999999887 689999974

>4ej6_A Putative zinc-binding dehydrogenase; structural genomics, nysgrc, PSI-biology, NEW YORK structura genomics research consortium; 1.89A {Sinorhizobium meliloti} PDB: 4ejm_A*

Probab=100.00  E-value=3.7e-59  Score=430.53  Aligned_cols=343  Identities=29%  Similarity=0.540  Sum_probs=306.1

Q ss_pred             cchhcceeEEEecCCceEEEEecCCCCCCCcEEEEEeeeeeCcccHhhhhccccCCccCCCCcccCccceEEEEEeCCCC
Q 017868           13 DGEEVNMAAWLLGVNTLKIQPFELPSLGPYDVLVRMKAVGICGSDVHYLKTLRCADFVVKEPMVIGHECAGVIEKVGSEV   92 (365)
Q Consensus        13 ~~~~~~~~~~~~~~~~l~~~~~~~p~~~~~eVlI~v~~~~l~~~D~~~~~g~~~~~~~~~~p~~~G~e~~G~V~~vG~~v   92 (365)
                      .++.+||++++.+++.++++++|.|+|+++||+|||.+++||++|++.+.|.+    ...+|.++|||++|+|+++|++|
T Consensus        19 ~~p~~mkA~v~~~~~~l~~~~~~~P~~~~~eVlVkv~a~gi~~~D~~~~~G~~----~~~~p~v~G~e~~G~V~~vG~~v   94 (370)
T 4ej6_A           19 YFQSMMKAVRLESVGNISVRNVGIPEPGPDDLLVKVEACGICGTDRHLLHGEF----PSTPPVTLGHEFCGIVVEAGSAV   94 (370)
T ss_dssp             --CCEEEEEEEEETTEEEEEEEECCCCCTTEEEEEEEEEECCHHHHHHHTTSS----CCCSSEECCCSEEEEEEEECTTC
T ss_pred             ccchheEEEEEecCCceEEEEccCCCCCCCeEEEEEEEEeecHHHHHHHcCCC----CCCCCeecCcceEEEEEEECCCC
Confidence            46778999999999999999999999999999999999999999999998753    35679999999999999999999


Q ss_pred             CCCCCCCEEEEcCCcCCCCCccccCCCCCCCCCccccccCCCCcceeeEEeecCCceEECCCCCCcchhccchhhHHHHH
Q 017868           93 KTLVPGDRVALEPGISCWRCDHCKGGRYNLCPEMKFFATPPVHGSLANQVVHPADLCFKLPDNVSLEEGAMCEPLSVGLH  172 (365)
Q Consensus        93 ~~~~~Gd~V~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~v~~~~~~~iP~~~~~~~a~~~~~~~~a~~  172 (365)
                      ++|++||||++.+..+|+.|++|+.+++++|.+....+.. .+|+|+||+++++++++++|+++++++|++..++.|||+
T Consensus        95 ~~~~vGdrV~~~~~~~cg~C~~C~~g~~~~C~~~~~~g~~-~~G~~aey~~v~~~~~~~~P~~~~~~~aal~~~~~ta~~  173 (370)
T 4ej6_A           95 RDIAPGARITGDPNISCGRCPQCQAGRVNLCRNLRAIGIH-RDGGFAEYVLVPRKQAFEIPLTLDPVHGAFCEPLACCLH  173 (370)
T ss_dssp             CSSCTTCEEEECCEECCSSSHHHHTTCGGGCTTCEEBTTT-BCCSSBSEEEEEGGGEEEECTTSCTTGGGGHHHHHHHHH
T ss_pred             CCCCCCCEEEECCCCCCCCChHHhCcCcccCCCccccCCC-CCCcceEEEEEchhhEEECCCCCCHHHHhhhhHHHHHHH
Confidence            9999999999999999999999999999999998887764 679999999999999999999999999997779999999


Q ss_pred             HHHhcCCCCCCEEEEEcCCHHHHHHHHHHHHHCCCCeEEEEeCChhHHHHHHHcCCCEEEeCCCCcccHHHHHHHHHHHh
Q 017868          173 ACRRANIGPETNVLIMGAGPIGLVTMLGAPRAFGAPRIVIVDVDDYRLSVAKEIGADNIVKVSTNLQDIAEEVEKIQKAM  252 (365)
Q Consensus       173 ~~~~~~~~~g~~vlI~G~g~~G~~ai~~l~~~~g~~~vi~v~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~i~~~~~~~  252 (365)
                      +++.+++++|++|||+|+|++|++++| +++.+|+++|+++++++++.++++++|++.++++..  .++.+.+++.....
T Consensus       174 ~l~~~~~~~g~~VlV~GaG~vG~~aiq-lak~~Ga~~Vi~~~~~~~~~~~a~~lGa~~vi~~~~--~~~~~~i~~~~~~~  250 (370)
T 4ej6_A          174 GVDLSGIKAGSTVAILGGGVIGLLTVQ-LARLAGATTVILSTRQATKRRLAEEVGATATVDPSA--GDVVEAIAGPVGLV  250 (370)
T ss_dssp             HHHHHTCCTTCEEEEECCSHHHHHHHH-HHHHTTCSEEEEECSCHHHHHHHHHHTCSEEECTTS--SCHHHHHHSTTSSS
T ss_pred             HHHhcCCCCCCEEEEECCCHHHHHHHH-HHHHcCCCEEEEECCCHHHHHHHHHcCCCEEECCCC--cCHHHHHHhhhhcc
Confidence            998899999999999999999999999 999999988999999999999999999999988643  57777776521122


Q ss_pred             CCCceEEEeCCCCHHHHHHHHHhcccCCEEEEEccCCC--CccccchHhhhcCcEEEeecccCCcHHHHHHHHHcCCCCC
Q 017868          253 GTGIDVSFDCAGLNKTMSTALGATCAGGKVCLVGMGHH--EMTVPLTPAAVREVDVVGVFRYKNTWPLCLELLRSGKIDV  330 (365)
Q Consensus       253 ~~~~d~vid~~g~~~~~~~~~~~l~~~G~~~~~g~~~~--~~~~~~~~~~~~~~~i~~~~~~~~~~~~~~~~l~~g~~~~  330 (365)
                      ++++|+|||++|....+..++++|+++|+++.+|....  ...++...+..+++++.+++.+...++++++++++|++.+
T Consensus       251 ~gg~Dvvid~~G~~~~~~~~~~~l~~~G~vv~~G~~~~~~~~~~~~~~~~~~~~~i~g~~~~~~~~~~~~~l~~~g~i~~  330 (370)
T 4ej6_A          251 PGGVDVVIECAGVAETVKQSTRLAKAGGTVVILGVLPQGEKVEIEPFDILFRELRVLGSFINPFVHRRAADLVATGAIEI  330 (370)
T ss_dssp             TTCEEEEEECSCCHHHHHHHHHHEEEEEEEEECSCCCTTCCCCCCHHHHHHTTCEEEECCSCTTCHHHHHHHHHTTCSCC
T ss_pred             CCCCCEEEECCCCHHHHHHHHHHhccCCEEEEEeccCCCCccccCHHHHHhCCcEEEEeccChHHHHHHHHHHHcCCCCh
Confidence            45999999999987789999999999999999986544  4456667788999999999888888999999999999988


Q ss_pred             CCceEEEecCChhhHHHHHHHHhcCC-CceEEEEeC
Q 017868          331 KPLVTHRFGFSQKEVEEAFETSARGG-TAIKVMFNL  365 (365)
Q Consensus       331 ~~~~~~~~~~~~~~~~~a~~~~~~~~-~~gk~vi~~  365 (365)
                      .++++++|+|  +++.+|++.+.+++ ..+|+++++
T Consensus       331 ~~~i~~~~~l--~~~~~A~~~~~~~~~~~~kvv~~~  364 (370)
T 4ej6_A          331 DRMISRRISL--DEAPDVISNPAAAGEVKVLVIPSA  364 (370)
T ss_dssp             GGGEEEEECG--GGHHHHHHSCCCTTCSEEEECCC-
T ss_pred             hHcEEEEEEH--HHHHHHHHHHHcCCCCeEEEEEcc
Confidence            8899999999  99999999998775 557887753

>4a2c_A Galactitol-1-phosphate 5-dehydrogenase; oxidoreductase, metal binding-site; 1.87A {Escherichia coli}

Probab=100.00  E-value=3.4e-58  Score=421.54  Aligned_cols=336  Identities=28%  Similarity=0.481  Sum_probs=302.2

Q ss_pred             ceeEEEecCCceEEEEecCCCC-CCCcEEEEEeeeeeCcccHhhhhccccCCccCCCCcccCccceEEEEEeCCCCCCCC
Q 017868           18 NMAAWLLGVNTLKIQPFELPSL-GPYDVLVRMKAVGICGSDVHYLKTLRCADFVVKEPMVIGHECAGVIEKVGSEVKTLV   96 (365)
Q Consensus        18 ~~~~~~~~~~~l~~~~~~~p~~-~~~eVlI~v~~~~l~~~D~~~~~g~~~~~~~~~~p~~~G~e~~G~V~~vG~~v~~~~   96 (365)
                      |||+++.+++.++++++|.|++ +||||||||.++|||++|++.+.|..    ...+|.++|||++|+|+++|++|++++
T Consensus         1 MkAvv~~~~g~l~v~e~p~P~~~~~~eVlVkv~a~gi~~sD~~~~~g~~----~~~~P~i~G~E~~G~V~~vG~~V~~~~   76 (346)
T 4a2c_A            1 MKSVVNDTDGIVRVAESVIPEIKHQDEVRVKIASSGLCGSDLPRIFKNG----AHYYPITLGHEFSGYIDAVGSGVDDLH   76 (346)
T ss_dssp             CEEEEECSSSCEEEEECCCCCCCSTTEEEEEEEEEECCTTHHHHHHSSC----SSSSSBCCCCEEEEEEEEECTTCCSCC
T ss_pred             CCEEEEecCCCEEEEEEeCCCCCCcCEEEEEEEEEEECHHHHHHHcCCC----CCCCCccccEEEEEEEEEECCCccccc
Confidence            7999999999999999999985 79999999999999999998887642    346799999999999999999999999


Q ss_pred             CCCEEEEcCCcCCCCCccccCCCCCCCCCccccccCCCCcceeeEEeecCCceEECCCCCCcchhccchhhHHHHHHHHh
Q 017868           97 PGDRVALEPGISCWRCDHCKGGRYNLCPEMKFFATPPVHGSLANQVVHPADLCFKLPDNVSLEEGAMCEPLSVGLHACRR  176 (365)
Q Consensus        97 ~Gd~V~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~v~~~~~~~iP~~~~~~~a~~~~~~~~a~~~~~~  176 (365)
                      +||||++.+...|++|.+|..+.+++|.+....+. ..+|+|+||+++++++++++|+++++++|+.++++++++++++.
T Consensus        77 ~GdrV~~~~~~~~g~c~~c~~g~~~~c~~~~~~g~-~~~G~~aey~~v~~~~~~~iP~~l~~~~aa~l~~~~~~~~~~~~  155 (346)
T 4a2c_A           77 PGDAVACVPLLPCFTCPECLKGFYSQCAKYDFIGS-RRDGGFAEYIVVKRKNVFALPTDMPIEDGAFIEPITVGLHAFHL  155 (346)
T ss_dssp             TTCEEEECCEECCSCSHHHHTTCGGGCSSCEEBTT-TBCCSSBSEEEEEGGGEEECCTTSCGGGGGGHHHHHHHHHHHHH
T ss_pred             CCCeEEeeeccCCCCcccccCCccccCCCcccccC-CCCcccccccccchheEEECCCCCCHHHHHhchHHHHHHHHHHH
Confidence            99999999999999999999999999999888776 46899999999999999999999999999999888888888888


Q ss_pred             cCCCCCCEEEEEcCCHHHHHHHHHHHHHCCCCeEEEEeCChhHHHHHHHcCCCEEEeCCCCcccHHHHHHHHHHHhCCCc
Q 017868          177 ANIGPETNVLIMGAGPIGLVTMLGAPRAFGAPRIVIVDVDDYRLSVAKEIGADNIVKVSTNLQDIAEEVEKIQKAMGTGI  256 (365)
Q Consensus       177 ~~~~~g~~vlI~G~g~~G~~ai~~l~~~~g~~~vi~v~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~i~~~~~~~~~~~  256 (365)
                      .++++|++|||+|+|++|++++| +++.+|++++++++++++|.++++++|+++++++.+  .++.+.++++++  +.++
T Consensus       156 ~~~~~g~~VlV~GaG~vG~~aiq-~ak~~G~~~vi~~~~~~~k~~~a~~lGa~~~i~~~~--~~~~~~~~~~~~--~~g~  230 (346)
T 4a2c_A          156 AQGCENKNVIIIGAGTIGLLAIQ-CAVALGAKSVTAIDISSEKLALAKSFGAMQTFNSSE--MSAPQMQSVLRE--LRFN  230 (346)
T ss_dssp             TTCCTTSEEEEECCSHHHHHHHH-HHHHTTCSEEEEEESCHHHHHHHHHTTCSEEEETTT--SCHHHHHHHHGG--GCSS
T ss_pred             hccCCCCEEEEECCCCcchHHHH-HHHHcCCcEEEEEechHHHHHHHHHcCCeEEEeCCC--CCHHHHHHhhcc--cCCc
Confidence            99999999999999999999999 999999998999999999999999999999998754  566666666644  6899


Q ss_pred             eEEEeCCCCHHHHHHHHHhcccCCEEEEEccCCCCcc---ccchHhhhcCcEEEeeccc------CCcHHHHHHHHHcCC
Q 017868          257 DVSFDCAGLNKTMSTALGATCAGGKVCLVGMGHHEMT---VPLTPAAVREVDVVGVFRY------KNTWPLCLELLRSGK  327 (365)
Q Consensus       257 d~vid~~g~~~~~~~~~~~l~~~G~~~~~g~~~~~~~---~~~~~~~~~~~~i~~~~~~------~~~~~~~~~~l~~g~  327 (365)
                      |+|+|++|.+..++.++++++++|+++.+|....+..   .+...+..+++++.|++..      .++++++++++++|+
T Consensus       231 d~v~d~~G~~~~~~~~~~~l~~~G~~v~~g~~~~~~~~~~~~~~~~~~k~~~i~G~~~~~~~~~~~~~~~~~~~l~~~g~  310 (346)
T 4a2c_A          231 QLILETAGVPQTVELAVEIAGPHAQLALVGTLHQDLHLTSATFGKILRKELTVIGSWMNYSSPWPGQEWETASRLLTERK  310 (346)
T ss_dssp             EEEEECSCSHHHHHHHHHHCCTTCEEEECCCCSSCEEECHHHHHHHHHHTCEEEECCTTCCSSTTCHHHHHHHHHHHTTC
T ss_pred             ccccccccccchhhhhhheecCCeEEEEEeccCCCccccccCHHHHhhceeEEEEEeccccCcchHHHHHHHHHHHHcCC
Confidence            9999999998899999999999999999987655432   3344567899999998643      356899999999999


Q ss_pred             CCCCCceEEEecCChhhHHHHHHHHhcCCCceEEEEeC
Q 017868          328 IDVKPLVTHRFGFSQKEVEEAFETSARGGTAIKVMFNL  365 (365)
Q Consensus       328 ~~~~~~~~~~~~~~~~~~~~a~~~~~~~~~~gk~vi~~  365 (365)
                      +.+.++++++|+|  +++.+|++.+++++..||+||++
T Consensus       311 l~~~~lI~~~~~l--~~~~~A~~~l~~~~~~GKvVl~P  346 (346)
T 4a2c_A          311 LSLEPLIAHRGSF--ESFAQAVRDIARNAMPGKVLLIP  346 (346)
T ss_dssp             SCCGGGEEEEECH--HHHHHHHHHHTTSCCCSEEEECC
T ss_pred             CCCCccEeEEEeH--HHHHHHHHHHHcCCCceEEEEEC
Confidence            9888899999999  99999999999999999999964

>2d8a_A PH0655, probable L-threonine 3-dehydrogenase; pyrococcus horikoshii OT3, structural genomics; HET: NAD; 2.05A {Pyrococcus horikoshii} PDB: 2dfv_A* 3gfb_A*

Probab=100.00  E-value=4.8e-58  Score=420.41  Aligned_cols=342  Identities=31%  Similarity=0.566  Sum_probs=287.3

Q ss_pred             chhcceeEEEecCC-ceEEEEecCCCCCCCcEEEEEeeeeeCcccHhhhhccccCCccCCCCcccCccceEEEEEeCCCC
Q 017868           14 GEEVNMAAWLLGVN-TLKIQPFELPSLGPYDVLVRMKAVGICGSDVHYLKTLRCADFVVKEPMVIGHECAGVIEKVGSEV   92 (365)
Q Consensus        14 ~~~~~~~~~~~~~~-~l~~~~~~~p~~~~~eVlI~v~~~~l~~~D~~~~~g~~~~~~~~~~p~~~G~e~~G~V~~vG~~v   92 (365)
                      ||.+||++++.+++ .+++.++|.|+|+++||+|||.++++|++|++.+.|.........+|.++|||++|+|+++|++|
T Consensus         1 ~m~~mka~~~~~~g~~l~~~~~~~P~~~~~eVlVkv~a~gi~~~D~~~~~g~~~~~~~~~~p~v~G~E~~G~V~~vG~~v   80 (348)
T 2d8a_A            1 MSEKMVAIMKTKPGYGAELVEVDVPKPGPGEVLIKVLATSICGTDLHIYEWNEWAQSRIKPPQIMGHEVAGEVVEIGPGV   80 (348)
T ss_dssp             --CEEEEEEECSSSSSCEEEEEECCCCCTTEEEEEEEEEECCHHHHHHHHTCTTHHHHCCSSEECCCEEEEEEEEECTTC
T ss_pred             CCCcceEEEEECCCCCEEEEECCCCCCCcCEEEEEEeEEEecHHHHHHHcCCCCCcccCCCCCccCccceEEEEEECCCC
Confidence            35679999999887 89999999999999999999999999999999988721110114678999999999999999999


Q ss_pred             CCCCCCCEEEEcCCcCCCCCccccCCCCCCCCCccccccCCCCcceeeEEeecCCceEECCCCCCcchhccchhhHHHHH
Q 017868           93 KTLVPGDRVALEPGISCWRCDHCKGGRYNLCPEMKFFATPPVHGSLANQVVHPADLCFKLPDNVSLEEGAMCEPLSVGLH  172 (365)
Q Consensus        93 ~~~~~Gd~V~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~v~~~~~~~iP~~~~~~~a~~~~~~~~a~~  172 (365)
                      ++|++||||++.+..+|++|++|+.+++++|++....+. ..+|+|+||+++++++++++|+++++++|+++++++|||+
T Consensus        81 ~~~~vGdrV~~~~~~~cg~C~~C~~g~~~~C~~~~~~g~-~~~G~~aey~~v~~~~~~~iP~~~~~~~aa~~~~~~ta~~  159 (348)
T 2d8a_A           81 EGIEVGDYVSVETHIVCGKCYACRRGQYHVCQNTKIFGV-DTDGVFAEYAVVPAQNIWKNPKSIPPEYATLQEPLGNAVD  159 (348)
T ss_dssp             CSCCTTCEEEECCEECCSCCC------------CEETTT-SSCCSSBSEEEEEGGGEEECCTTSCHHHHTTHHHHHHHHH
T ss_pred             CcCCCCCEEEEcCCCCCCCChhhhCcCcccCCCCCeecC-CCCCcCcceEEeChHHeEECCCCCCHHHHHhhhHHHHHHH
Confidence            999999999999999999999999999999998877664 3679999999999999999999999999998888999999


Q ss_pred             HHHhcCCCCCCEEEEEcCCHHHHHHHHHHHHHCCCCeEEEEeCChhHHHHHHHcCCCEEEeCCCCcccHHHHHHHHHHHh
Q 017868          173 ACRRANIGPETNVLIMGAGPIGLVTMLGAPRAFGAPRIVIVDVDDYRLSVAKEIGADNIVKVSTNLQDIAEEVEKIQKAM  252 (365)
Q Consensus       173 ~~~~~~~~~g~~vlI~G~g~~G~~ai~~l~~~~g~~~vi~v~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~i~~~~~~~  252 (365)
                      +++.+++ +|++|||+|+|++|++++| +++..|+.+|+++++++++.++++++|++.++++..  +++.+.+++.+.  
T Consensus       160 ~l~~~~~-~g~~VlV~GaG~vG~~~~q-~a~~~Ga~~Vi~~~~~~~~~~~~~~~Ga~~~~~~~~--~~~~~~v~~~~~--  233 (348)
T 2d8a_A          160 TVLAGPI-SGKSVLITGAGPLGLLGIA-VAKASGAYPVIVSEPSDFRRELAKKVGADYVINPFE--EDVVKEVMDITD--  233 (348)
T ss_dssp             HHTTSCC-TTCCEEEECCSHHHHHHHH-HHHHTTCCSEEEECSCHHHHHHHHHHTCSEEECTTT--SCHHHHHHHHTT--
T ss_pred             HHHhcCC-CCCEEEEECCCHHHHHHHH-HHHHcCCCEEEEECCCHHHHHHHHHhCCCEEECCCC--cCHHHHHHHHcC--
Confidence            9988889 9999999999999999999 999999966888999999999999999999887643  577777776542  


Q ss_pred             CCCceEEEeCCCCHHHHHHHHHhcccCCEEEEEccCCCCccccc-hHhhhcCcEEEeeccc--CCcHHHHHHHHHcCCCC
Q 017868          253 GTGIDVSFDCAGLNKTMSTALGATCAGGKVCLVGMGHHEMTVPL-TPAAVREVDVVGVFRY--KNTWPLCLELLRSGKID  329 (365)
Q Consensus       253 ~~~~d~vid~~g~~~~~~~~~~~l~~~G~~~~~g~~~~~~~~~~-~~~~~~~~~i~~~~~~--~~~~~~~~~~l~~g~~~  329 (365)
                      +.++|+|||++|....+..++++++++|+++.+|.......++. ..+..+++++.+++..  .+.++++++++++|+++
T Consensus       234 g~g~D~vid~~g~~~~~~~~~~~l~~~G~iv~~g~~~~~~~~~~~~~~~~~~~~i~g~~~~~~~~~~~~~~~l~~~g~i~  313 (348)
T 2d8a_A          234 GNGVDVFLEFSGAPKALEQGLQAVTPAGRVSLLGLYPGKVTIDFNNLIIFKALTIYGITGRHLWETWYTVSRLLQSGKLN  313 (348)
T ss_dssp             TSCEEEEEECSCCHHHHHHHHHHEEEEEEEEECCCCSSCCCCCHHHHTTTTTCEEEECCCCCSHHHHHHHHHHHHHTCCC
T ss_pred             CCCCCEEEECCCCHHHHHHHHHHHhcCCEEEEEccCCCCcccCchHHHHhCCcEEEEecCCCcHHHHHHHHHHHHcCCCC
Confidence            56899999999987788999999999999999987554445555 5677899999997654  46789999999999987


Q ss_pred             CCCceEEEec-CChhhHHHHHHHHhcCCCceEEEEeC
Q 017868          330 VKPLVTHRFG-FSQKEVEEAFETSARGGTAIKVMFNL  365 (365)
Q Consensus       330 ~~~~~~~~~~-~~~~~~~~a~~~~~~~~~~gk~vi~~  365 (365)
                      +.+.++++|+ |  +++.+|++.+++ ...||+||++
T Consensus       314 ~~~~i~~~~~gl--~~~~~A~~~~~~-~~~gKvvi~~  347 (348)
T 2d8a_A          314 LDPIITHKYKGF--DKYEEAFELMRA-GKTGKVVFML  347 (348)
T ss_dssp             CTTTEEEEEESS--TTHHHHHHHHHT-TCCSEEEEEC
T ss_pred             hHHhheeeCCCH--HHHHHHHHHHhC-CCceEEEEee
Confidence            7899999999 9  999999999977 5789999975

>3uko_A Alcohol dehydrogenase class-3; alcohol dehydrogenase III, homodimer, reduction of GSNO, NAD binding, oxidoreductase; HET: NAD SO4; 1.40A {Arabidopsis thaliana}

Probab=100.00  E-value=4.1e-57  Score=418.60  Aligned_cols=342  Identities=23%  Similarity=0.360  Sum_probs=295.8

Q ss_pred             cchhcceeEEEecCC-ceEEEEecCCCCCCCcEEEEEeeeeeCcccHhhhhccccCCccCCCCcccCccceEEEEEeCCC
Q 017868           13 DGEEVNMAAWLLGVN-TLKIQPFELPSLGPYDVLVRMKAVGICGSDVHYLKTLRCADFVVKEPMVIGHECAGVIEKVGSE   91 (365)
Q Consensus        13 ~~~~~~~~~~~~~~~-~l~~~~~~~p~~~~~eVlI~v~~~~l~~~D~~~~~g~~~~~~~~~~p~~~G~e~~G~V~~vG~~   91 (365)
                      .++.+|||+++.+++ +++++++|.|+|+++||+|||.+++||++|++.+.|...   ...+|.++|||++|+|+++|++
T Consensus         4 ~~~~tmkA~v~~~~~~~l~~~~~~~p~~~~~eVlVkv~a~gi~~~D~~~~~g~~~---~~~~P~v~GhE~~G~V~~vG~~   80 (378)
T 3uko_A            4 GQVITCKAAVAYEPNKPLVIEDVQVAPPQAGEVRIKILYTALCHTDAYTWSGKDP---EGLFPCILGHEAAGIVESVGEG   80 (378)
T ss_dssp             TSCEEEEEEEBCSTTSCCEEEEEEECCCCTTEEEEEEEEEEECHHHHHHHTTCCT---TCCSSBCCCCEEEEEEEEECTT
T ss_pred             ccceeeEEEEEecCCCccEEEEecCCCCCCCeEEEEEEEeecCHHHHHHhcCCCC---CCCCCccCCccceEEEEEeCCC
Confidence            356779999999876 499999999999999999999999999999999987532   2467999999999999999999


Q ss_pred             CCCCCCCCEEEEcCCcCCCCCccccCCCCCCCCCcccc---cc------------------CCCCcceeeEEeecCCceE
Q 017868           92 VKTLVPGDRVALEPGISCWRCDHCKGGRYNLCPEMKFF---AT------------------PPVHGSLANQVVHPADLCF  150 (365)
Q Consensus        92 v~~~~~Gd~V~~~~~~~~~~~~~~~~~~~~~~~~~~~~---~~------------------~~~~g~~~~~~~v~~~~~~  150 (365)
                      |++|++||||++.+..+|++|++|+.+++++|++....   |.                  ....|+|+||+++++++++
T Consensus        81 v~~~~vGdrV~~~~~~~Cg~C~~C~~g~~~~C~~~~~~~~~G~~~~~g~~~~~~~g~~~~~~~~~G~~aey~~v~~~~~~  160 (378)
T 3uko_A           81 VTEVQAGDHVIPCYQAECRECKFCKSGKTNLCGKVRSATGVGIMMNDRKSRFSVNGKPIYHFMGTSTFSQYTVVHDVSVA  160 (378)
T ss_dssp             CCSCCTTCEEEECSSCCCSSSHHHHHTSCSCCCSSHHHHTTTCCTTTSSCSEEETTEEEBCCTTTCCSBSEEEEEGGGEE
T ss_pred             CCcCCCCCEEEEecCCCCCCChhhhCcCcCcCcCcccccccccccccCccccccCCcccccccCCcceEeEEEechhheE
Confidence            99999999999999999999999999999999976441   10                  1123799999999999999


Q ss_pred             ECCCCCCcchhccch-hhHHHHHHH-HhcCCCCCCEEEEEcCCHHHHHHHHHHHHHCCCCeEEEEeCChhHHHHHHHcCC
Q 017868          151 KLPDNVSLEEGAMCE-PLSVGLHAC-RRANIGPETNVLIMGAGPIGLVTMLGAPRAFGAPRIVIVDVDDYRLSVAKEIGA  228 (365)
Q Consensus       151 ~iP~~~~~~~a~~~~-~~~~a~~~~-~~~~~~~g~~vlI~G~g~~G~~ai~~l~~~~g~~~vi~v~~~~~~~~~~~~~g~  228 (365)
                      ++|+++++++|+.++ ++.|||+++ +.+++++|++|||+|+|++|++++| +++.+|+++|++++++++|.++++++|+
T Consensus       161 ~iP~~~~~~~aa~l~~~~~ta~~al~~~~~~~~g~~VlV~GaG~vG~~a~q-~a~~~Ga~~Vi~~~~~~~~~~~a~~lGa  239 (378)
T 3uko_A          161 KIDPTAPLDKVCLLGCGVPTGLGAVWNTAKVEPGSNVAIFGLGTVGLAVAE-GAKTAGASRIIGIDIDSKKYETAKKFGV  239 (378)
T ss_dssp             ECCTTSCHHHHGGGGTHHHHHHHHHHTTTCCCTTCCEEEECCSHHHHHHHH-HHHHHTCSCEEEECSCTTHHHHHHTTTC
T ss_pred             ECCCCCCHHHhhhhhhhHHHHHHHHHhhcCCCCCCEEEEECCCHHHHHHHH-HHHHcCCCeEEEEcCCHHHHHHHHHcCC
Confidence            999999999999987 788999987 5689999999999999999999999 9999999789999999999999999999


Q ss_pred             CEEEeCCCCcccHHHHHHHHHHHhCCCceEEEeCCCCHHHHHHHHHhcccC-CEEEEEccCCCC--ccccchHhhhcCcE
Q 017868          229 DNIVKVSTNLQDIAEEVEKIQKAMGTGIDVSFDCAGLNKTMSTALGATCAG-GKVCLVGMGHHE--MTVPLTPAAVREVD  305 (365)
Q Consensus       229 ~~~~~~~~~~~~~~~~i~~~~~~~~~~~d~vid~~g~~~~~~~~~~~l~~~-G~~~~~g~~~~~--~~~~~~~~~~~~~~  305 (365)
                      +.++++.+..+++.+.+++++   ++++|+||||+|.+..+..++++++++ |+++.+|.....  ..++...+. ++++
T Consensus       240 ~~vi~~~~~~~~~~~~i~~~~---~gg~D~vid~~g~~~~~~~~~~~l~~g~G~iv~~G~~~~~~~~~~~~~~~~-~~~~  315 (378)
T 3uko_A          240 NEFVNPKDHDKPIQEVIVDLT---DGGVDYSFECIGNVSVMRAALECCHKGWGTSVIVGVAASGQEISTRPFQLV-TGRV  315 (378)
T ss_dssp             CEEECGGGCSSCHHHHHHHHT---TSCBSEEEECSCCHHHHHHHHHTBCTTTCEEEECSCCCTTCCEEECTHHHH-TTCE
T ss_pred             cEEEccccCchhHHHHHHHhc---CCCCCEEEECCCCHHHHHHHHHHhhccCCEEEEEcccCCCCccccCHHHHh-cCcE
Confidence            999887544578888887764   349999999999988899999999996 999999865432  233333333 4889


Q ss_pred             EEeeccc----CCcHHHHHHHHHcCCCCCCCceEEEecCChhhHHHHHHHHhcCCCceEEEEeC
Q 017868          306 VVGVFRY----KNTWPLCLELLRSGKIDVKPLVTHRFGFSQKEVEEAFETSARGGTAIKVMFNL  365 (365)
Q Consensus       306 i~~~~~~----~~~~~~~~~~l~~g~~~~~~~~~~~~~~~~~~~~~a~~~~~~~~~~gk~vi~~  365 (365)
                      +.+++..    .+.+.++++++++|++.+.++++++|+|  +++.+|++.+++++.. |+||++
T Consensus       316 i~g~~~~~~~~~~~~~~~~~l~~~g~l~~~~~i~~~~~l--~~~~~A~~~~~~g~~~-Kvvi~~  376 (378)
T 3uko_A          316 WKGTAFGGFKSRTQVPWLVEKYMNKEIKVDEYITHNLTL--GEINKAFDLLHEGTCL-RCVLDT  376 (378)
T ss_dssp             EEECSGGGCCHHHHHHHHHHHHHTTSSCCGGGEEEEEEG--GGHHHHHHHTTCTTCS-EEEEET
T ss_pred             EEEEEecCCCchHHHHHHHHHHHcCCCChhHheeeEeeH--HHHHHHHHHHHCCCce-EEEEec
Confidence            9987643    4578999999999999878889999999  9999999999988765 999875

>1p0f_A NADP-dependent alcohol dehydrogenase; ADH topology, NADP(H)-dependent, oxidoreductase; HET: NAP; 1.80A {Rana perezi} SCOP: b.35.1.2 c.2.1.1 PDB: 1p0c_A*

Probab=100.00  E-value=5.5e-56  Score=410.49  Aligned_cols=338  Identities=23%  Similarity=0.366  Sum_probs=290.5

Q ss_pred             hhcceeEEEecCC-ceEEEEecCCCCCCCcEEEEEeeeeeCcccHhhhhccccCCccCCCCcccCccceEEEEEeCCCCC
Q 017868           15 EEVNMAAWLLGVN-TLKIQPFELPSLGPYDVLVRMKAVGICGSDVHYLKTLRCADFVVKEPMVIGHECAGVIEKVGSEVK   93 (365)
Q Consensus        15 ~~~~~~~~~~~~~-~l~~~~~~~p~~~~~eVlI~v~~~~l~~~D~~~~~g~~~~~~~~~~p~~~G~e~~G~V~~vG~~v~   93 (365)
                      +++||++++.+++ +++++++|.|+|+++||+|||.+++||++|++.+.|...    ..+|.++|||++|+|+++|++|+
T Consensus         7 p~~mka~~~~~~g~~l~~~~~~~p~~~~~eVlVkv~a~gi~~~D~~~~~g~~~----~~~P~v~GhE~~G~V~~vG~~v~   82 (373)
T 1p0f_A            7 DITCKAAVAWEPHKPLSLETITVAPPKAHEVRIKILASGICGSDSSVLKEIIP----SKFPVILGHEAVGVVESIGAGVT   82 (373)
T ss_dssp             CEEEEEEEBSSTTSCCEEEEEEECCCCTTEEEEEEEEEECCHHHHHHHTTSSC----CCSSBCCCCCEEEEEEEECTTCC
T ss_pred             cceeEEEEEEcCCCCeeEEEeeCCCCCCCeEEEEEeEEeecchhHHHhcCCCC----CCCCcccCcCceEEEEEECCCCC
Confidence            4568999999875 699999999999999999999999999999998887432    45789999999999999999999


Q ss_pred             CCCCCCEEEEcCCcCCCCCccccCCCCCCCCCcccc---ccC-----------------CCCcceeeEEeecCCceEECC
Q 017868           94 TLVPGDRVALEPGISCWRCDHCKGGRYNLCPEMKFF---ATP-----------------PVHGSLANQVVHPADLCFKLP  153 (365)
Q Consensus        94 ~~~~Gd~V~~~~~~~~~~~~~~~~~~~~~~~~~~~~---~~~-----------------~~~g~~~~~~~v~~~~~~~iP  153 (365)
                      +|++||||++.+..+|++|++|+.+++++|++....   +..                 ...|+|+||+++++++++++|
T Consensus        83 ~~~vGdrV~~~~~~~Cg~C~~C~~g~~~~C~~~~~~~~~G~~~~g~~~~~~~g~~~~~~~~~G~~aey~~v~~~~~~~iP  162 (373)
T 1p0f_A           83 CVKPGDKVIPLFVPQCGSCRACKSSNSNFCEKNDMGAKTGLMADMTSRFTCRGKPIYNLMGTSTFTEYTVVADIAVAKID  162 (373)
T ss_dssp             SCCTTCEEEECSSCCCSSSHHHHCTTCCCCTTCSTTTCCCSCTTSCCSEEETTEEEBCSTTTCCSBSEEEEETTSEEEEC
T ss_pred             ccCCCCEEEECCCCCCCCChhhcCCCcCcCcCCCcccccccccCCccccccCCcccccccCCccceeEEEEchhhEEECC
Confidence            999999999999999999999999999999976431   110                 135999999999999999999


Q ss_pred             CCCCcchhccch-hhHHHHHHH-HhcCCCCCCEEEEEcCCHHHHHHHHHHHHHCCCCeEEEEeCChhHHHHHHHcCCCEE
Q 017868          154 DNVSLEEGAMCE-PLSVGLHAC-RRANIGPETNVLIMGAGPIGLVTMLGAPRAFGAPRIVIVDVDDYRLSVAKEIGADNI  231 (365)
Q Consensus       154 ~~~~~~~a~~~~-~~~~a~~~~-~~~~~~~g~~vlI~G~g~~G~~ai~~l~~~~g~~~vi~v~~~~~~~~~~~~~g~~~~  231 (365)
                      ++++++ |+.++ ++.|||+++ +.+++++|++|||+|+|++|++++| +++.+|+++|++++++++|.++++++|++++
T Consensus       163 ~~l~~~-aa~l~~~~~ta~~~l~~~~~~~~g~~VlV~GaG~vG~~aiq-lak~~Ga~~Vi~~~~~~~~~~~a~~lGa~~v  240 (373)
T 1p0f_A          163 PKAPLE-SCLIGCGFATGYGAAVNTAKVTPGSTCAVFGLGGVGFSAIV-GCKAAGASRIIGVGTHKDKFPKAIELGATEC  240 (373)
T ss_dssp             TTCCGG-GGGGGTHHHHHHHHHHTTTCCCTTCEEEEECCSHHHHHHHH-HHHHHTCSEEEEECSCGGGHHHHHHTTCSEE
T ss_pred             CCCChh-hhhhhhHHHHHHHHHHhccCCCCCCEEEEECCCHHHHHHHH-HHHHcCCCeEEEECCCHHHHHHHHHcCCcEE
Confidence            999999 88886 788999987 5689999999999999999999999 9999999779999999999999999999998


Q ss_pred             EeCCCCcccHHHHHHHHHHHhCCCceEEEeCCCCHHHHHHHHHhcccC-CEEEEEccCCC--CccccchHhhhcCcEEEe
Q 017868          232 VKVSTNLQDIAEEVEKIQKAMGTGIDVSFDCAGLNKTMSTALGATCAG-GKVCLVGMGHH--EMTVPLTPAAVREVDVVG  308 (365)
Q Consensus       232 ~~~~~~~~~~~~~i~~~~~~~~~~~d~vid~~g~~~~~~~~~~~l~~~-G~~~~~g~~~~--~~~~~~~~~~~~~~~i~~  308 (365)
                      +++.+..+++.+.+++.+   ++++|+|||++|....+..++++++++ |+++.+|....  ...++...+..+. ++.+
T Consensus       241 i~~~~~~~~~~~~i~~~t---~gg~Dvvid~~g~~~~~~~~~~~l~~~~G~iv~~G~~~~~~~~~~~~~~~~~~~-~i~g  316 (373)
T 1p0f_A          241 LNPKDYDKPIYEVICEKT---NGGVDYAVECAGRIETMMNALQSTYCGSGVTVVLGLASPNERLPLDPLLLLTGR-SLKG  316 (373)
T ss_dssp             ECGGGCSSCHHHHHHHHT---TSCBSEEEECSCCHHHHHHHHHTBCTTTCEEEECCCCCTTCCEEECTHHHHTTC-EEEE
T ss_pred             EecccccchHHHHHHHHh---CCCCCEEEECCCCHHHHHHHHHHHhcCCCEEEEEccCCCCCccccCHHHhccCc-eEEe
Confidence            886532356777777654   349999999999877889999999999 99999986543  2344445566677 8988


Q ss_pred             eccc---CCcHHHHHHHHHcCCCCCCCceEEEecCChhhHHHHHHHHhcCCCceEEEEeC
Q 017868          309 VFRY---KNTWPLCLELLRSGKIDVKPLVTHRFGFSQKEVEEAFETSARGGTAIKVMFNL  365 (365)
Q Consensus       309 ~~~~---~~~~~~~~~~l~~g~~~~~~~~~~~~~~~~~~~~~a~~~~~~~~~~gk~vi~~  365 (365)
                      ++..   .+.++++++++++|++.+.+.++++|+|  +++.+|++.+++++. +|+||++
T Consensus       317 ~~~~~~~~~~~~~~~~l~~~g~i~~~~~i~~~~~l--~~~~~A~~~~~~~~~-~kvvi~~  373 (373)
T 1p0f_A          317 SVFGGFKGEEVSRLVDDYMKKKINVNFLVSTKLTL--DQINKAFELLSSGQG-VRSIMIY  373 (373)
T ss_dssp             CSGGGCCGGGHHHHHHHHHTTSSCGGGGEEEEECG--GGHHHHHHHTTTSSC-SEEEEEC
T ss_pred             eccCCcCHHHHHHHHHHHHcCCCCchheEEEEeeH--HHHHHHHHHHHCCCc-ceEEEeC
Confidence            7542   3689999999999999777788999999  999999999988764 7999875

>2dq4_A L-threonine 3-dehydrogenase; NAD-dependent, oxidoreductase, structural genomics, NPPSFA; HET: MES; 2.50A {Thermus thermophilus} PDB: 2ejv_A*

Probab=100.00  E-value=7.3e-57  Score=411.75  Aligned_cols=336  Identities=32%  Similarity=0.568  Sum_probs=296.6

Q ss_pred             ceeEEEecCCc-eEEEEecCCCCCCCcEEEEEeeeeeCcccHhhhhccccCCccCCCCcccCccceEEEEEeCCCCCCCC
Q 017868           18 NMAAWLLGVNT-LKIQPFELPSLGPYDVLVRMKAVGICGSDVHYLKTLRCADFVVKEPMVIGHECAGVIEKVGSEVKTLV   96 (365)
Q Consensus        18 ~~~~~~~~~~~-l~~~~~~~p~~~~~eVlI~v~~~~l~~~D~~~~~g~~~~~~~~~~p~~~G~e~~G~V~~vG~~v~~~~   96 (365)
                      ||++++.+++. +++.++|.|+|+++||+|||.++++|++|++.+.|.........+|.++|||++|+|+++|++|++|+
T Consensus         1 Mka~~~~~~g~~l~~~~~~~P~~~~~eVlVkv~a~gi~~~D~~~~~g~~~~~~~~~~p~v~G~E~~G~V~~vG~~v~~~~   80 (343)
T 2dq4_A            1 MRALAKLAPEEGLTLVDRPVPEPGPGEILVRVEAASICGTDLHIWKWDAWARGRIRPPLVTGHEFSGVVEAVGPGVRRPQ   80 (343)
T ss_dssp             CEEEEECSSSSSCEEEECCCCCCCTTEEEEEEEEEECCHHHHHHHTTCHHHHHHCCSSEECCCEEEEEEEEECTTCCSSC
T ss_pred             CeEEEEeCCCCcEEEEeccCCCCCCCEEEEEEEEEeechhhHHHHcCCCCccccCCCCCcCCccceEEEEEECCCCCcCC
Confidence            68888888766 99999999999999999999999999999999887432101245789999999999999999999999


Q ss_pred             CCCEEEEcCCcCCCCCccccCCCCCCCCCccccccCCCCcceeeEEeecCCceEECCCCCCcchhccchhhHHHHHHHH-
Q 017868           97 PGDRVALEPGISCWRCDHCKGGRYNLCPEMKFFATPPVHGSLANQVVHPADLCFKLPDNVSLEEGAMCEPLSVGLHACR-  175 (365)
Q Consensus        97 ~Gd~V~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~v~~~~~~~iP~~~~~~~a~~~~~~~~a~~~~~-  175 (365)
                      +||||++.+..+|++|++|+.+++++|++....+. ..+|+|+||+++++++++++|+++++++|+++++++|||++++ 
T Consensus        81 vGdrV~~~~~~~cg~C~~C~~g~~~~C~~~~~~g~-~~~G~~aey~~v~~~~~~~iP~~~~~~~aa~~~~~~ta~~~l~~  159 (343)
T 2dq4_A           81 VGDHVSLESHIVCHACPACRTGNYHVCLNTQILGV-DRDGGFAEYVVVPAENAWVNPKDLPFEVAAILEPFGNAVHTVYA  159 (343)
T ss_dssp             TTCEEEECCEECCSCSHHHHTTCGGGCTTCEEBTT-TBCCSSBSEEEEEGGGEEEECTTSCHHHHTTHHHHHHHHHHHHS
T ss_pred             CCCEEEECCCCCCCCChhhhCcCcccCCCcceecC-CCCCcceeEEEEchHHeEECCCCCCHHHHHhhhHHHHHHHHHHH
Confidence            99999999999999999999999999998876664 3579999999999999999999999999999888899999997 


Q ss_pred             hcCCCCCCEEEEEcCCHHHHHHHHHHHHHCCCCeEEEEeCChhHHHHHHHcCCCEEEeCCCCcccHHHHHHHHHHHhCCC
Q 017868          176 RANIGPETNVLIMGAGPIGLVTMLGAPRAFGAPRIVIVDVDDYRLSVAKEIGADNIVKVSTNLQDIAEEVEKIQKAMGTG  255 (365)
Q Consensus       176 ~~~~~~g~~vlI~G~g~~G~~ai~~l~~~~g~~~vi~v~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~i~~~~~~~~~~  255 (365)
                      .+++ +|++|||+|+|++|++++| +++.+|+++|+++++++++.++++++ ++.++++..  +++.+.+++.+   +.+
T Consensus       160 ~~~~-~g~~VlV~GaG~vG~~~~q-~a~~~Ga~~Vi~~~~~~~~~~~~~~l-a~~v~~~~~--~~~~~~~~~~~---~~g  231 (343)
T 2dq4_A          160 GSGV-SGKSVLITGAGPIGLMAAM-VVRASGAGPILVSDPNPYRLAFARPY-ADRLVNPLE--EDLLEVVRRVT---GSG  231 (343)
T ss_dssp             TTCC-TTSCEEEECCSHHHHHHHH-HHHHTTCCSEEEECSCHHHHGGGTTT-CSEEECTTT--SCHHHHHHHHH---SSC
T ss_pred             hCCC-CCCEEEEECCCHHHHHHHH-HHHHcCCCEEEEECCCHHHHHHHHHh-HHhccCcCc--cCHHHHHHHhc---CCC
Confidence            8889 9999999999999999999 99999996688899999999999999 998887643  57777777653   678


Q ss_pred             ceEEEeCCCCHHHHHHHHHhcccCCEEEEEccCCCCccccc-hHhhhcCcEEEeeccc--CCcHHHHHHHHHcCCCCCCC
Q 017868          256 IDVSFDCAGLNKTMSTALGATCAGGKVCLVGMGHHEMTVPL-TPAAVREVDVVGVFRY--KNTWPLCLELLRSGKIDVKP  332 (365)
Q Consensus       256 ~d~vid~~g~~~~~~~~~~~l~~~G~~~~~g~~~~~~~~~~-~~~~~~~~~i~~~~~~--~~~~~~~~~~l~~g~~~~~~  332 (365)
                      +|+|||++|....+..++++++++|+++.+|.......++. ..+..+++++.+++..  .+.++++++++++|++.+.+
T Consensus       232 ~D~vid~~g~~~~~~~~~~~l~~~G~iv~~g~~~~~~~~~~~~~~~~~~~~i~g~~~~~~~~~~~~~~~l~~~g~~~~~~  311 (343)
T 2dq4_A          232 VEVLLEFSGNEAAIHQGLMALIPGGEARILGIPSDPIRFDLAGELVMRGITAFGIAGRRLWQTWMQGTALVYSGRVDLSP  311 (343)
T ss_dssp             EEEEEECSCCHHHHHHHHHHEEEEEEEEECCCCSSCEEECHHHHTGGGTCEEEECCSCCTTHHHHHHHHHHHHTSSCCGG
T ss_pred             CCEEEECCCCHHHHHHHHHHHhcCCEEEEEecCCCCceeCcHHHHHhCceEEEEeecCCCHHHHHHHHHHHHcCCCChHH
Confidence            99999999987788999999999999999987554445555 6678899999998654  56799999999999987788


Q ss_pred             ceEEEecCChhhHHHHHHHHhcCCCceEEEEeC
Q 017868          333 LVTHRFGFSQKEVEEAFETSARGGTAIKVMFNL  365 (365)
Q Consensus       333 ~~~~~~~~~~~~~~~a~~~~~~~~~~gk~vi~~  365 (365)
                      .++++|++  +++++|++.+++++. ||+|+++
T Consensus       312 ~i~~~~~l--~~~~~A~~~~~~~~~-gKvv~~~  341 (343)
T 2dq4_A          312 LLTHRLPL--SRYREAFGLLASGQA-VKVILDP  341 (343)
T ss_dssp             GEEEEEEG--GGHHHHHHHHHHSSC-SEEEEET
T ss_pred             heeEEecH--HHHHHHHHHHhcCCc-eEEEEee
Confidence            89999999  999999999988876 9999974

>3s2e_A Zinc-containing alcohol dehydrogenase superfamily; FURX, oxidoreductase; HET: NAD; 1.76A {Ralstonia eutropha} PDB: 3s1l_A* 3s2f_A* 3s2g_A* 3s2i_A* 1llu_A* 3meq_A*

Probab=100.00  E-value=9.4e-56  Score=404.06  Aligned_cols=333  Identities=26%  Similarity=0.396  Sum_probs=296.1

Q ss_pred             cceeEEEecC-CceEEEEecCCCCCCCcEEEEEeeeeeCcccHhhhhccccCCccCCCCcccCccceEEEEEeCCCCCCC
Q 017868           17 VNMAAWLLGV-NTLKIQPFELPSLGPYDVLVRMKAVGICGSDVHYLKTLRCADFVVKEPMVIGHECAGVIEKVGSEVKTL   95 (365)
Q Consensus        17 ~~~~~~~~~~-~~l~~~~~~~p~~~~~eVlI~v~~~~l~~~D~~~~~g~~~~~~~~~~p~~~G~e~~G~V~~vG~~v~~~   95 (365)
                      +||++++.++ ++++++++|.|+|+++||+|||.++++|++|++.+.|....  ...+|.++|||++|+|+++|++|++|
T Consensus         2 ~MkA~~~~~~g~~l~~~~~~~P~~~~~eVlVkv~a~gi~~~D~~~~~g~~~~--~~~~P~v~G~E~~G~V~~vG~~v~~~   79 (340)
T 3s2e_A            2 MMKAAVVRAFGAPLTIDEVPVPQPGPGQVQVKIEASGVCHTDLHAADGDWPV--KPTLPFIPGHEGVGYVSAVGSGVSRV   79 (340)
T ss_dssp             EEEEEEBCSTTSCCEEEEEECCCCCTTCEEEEEEEEEECHHHHHHHHTCSSS--CCCSSBCCCSEEEEEEEEECSSCCSC
T ss_pred             ceEEEEEecCCCCCEEEEccCCCCCCCeEEEEEEEeccCHHHHHHHcCCCCC--CCCCCcccCCcceEEEEEECCCCCcC
Confidence            4889999875 47999999999999999999999999999999999875432  14679999999999999999999999


Q ss_pred             CCCCEE-EEcCCcCCCCCccccCCCCCCCCCccccccCCCCcceeeEEeecCCceEECCCCCCcchhccch-hhHHHHHH
Q 017868           96 VPGDRV-ALEPGISCWRCDHCKGGRYNLCPEMKFFATPPVHGSLANQVVHPADLCFKLPDNVSLEEGAMCE-PLSVGLHA  173 (365)
Q Consensus        96 ~~Gd~V-~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~v~~~~~~~iP~~~~~~~a~~~~-~~~~a~~~  173 (365)
                      ++|||| +..+..+|+.|.+|+.+++++|.+....+. ..+|+|+||+++++++++++|+++++++|+.++ .+.|||++
T Consensus        80 ~vGdrV~~~~~~~~cg~C~~c~~g~~~~c~~~~~~g~-~~~G~~aey~~v~~~~~~~iP~~~~~~~aa~l~~~~~ta~~~  158 (340)
T 3s2e_A           80 KEGDRVGVPWLYSACGYCEHCLQGWETLCEKQQNTGY-SVNGGYGEYVVADPNYVGLLPDKVGFVEIAPILCAGVTVYKG  158 (340)
T ss_dssp             CTTCEEEEESEEECCSSSHHHHTTCGGGCTTCEEBTT-TBCCSSBSEEEECTTTSEECCTTSCHHHHGGGGTHHHHHHHH
T ss_pred             CCCCEEEecCCCCCCCCChHHhCcCcccCccccccCC-CCCCcceeEEEechHHEEECCCCCCHHHhhcccchhHHHHHH
Confidence            999999 567788999999999999999999887776 467999999999999999999999999999876 78899999


Q ss_pred             HHhcCCCCCCEEEEEcCCHHHHHHHHHHHHHCCCCeEEEEeCChhHHHHHHHcCCCEEEeCCCCcccHHHHHHHHHHHhC
Q 017868          174 CRRANIGPETNVLIMGAGPIGLVTMLGAPRAFGAPRIVIVDVDDYRLSVAKEIGADNIVKVSTNLQDIAEEVEKIQKAMG  253 (365)
Q Consensus       174 ~~~~~~~~g~~vlI~G~g~~G~~ai~~l~~~~g~~~vi~v~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~i~~~~~~~~  253 (365)
                      ++..++++|++|||+|+|++|++++| +++.+|+ +|+++++++++.++++++|++.++++..  +++.+.+++ +  .+
T Consensus       159 l~~~~~~~g~~VlV~GaG~vG~~a~q-la~~~Ga-~Vi~~~~~~~~~~~~~~lGa~~~i~~~~--~~~~~~~~~-~--~g  231 (340)
T 3s2e_A          159 LKVTDTRPGQWVVISGIGGLGHVAVQ-YARAMGL-RVAAVDIDDAKLNLARRLGAEVAVNARD--TDPAAWLQK-E--IG  231 (340)
T ss_dssp             HHTTTCCTTSEEEEECCSTTHHHHHH-HHHHTTC-EEEEEESCHHHHHHHHHTTCSEEEETTT--SCHHHHHHH-H--HS
T ss_pred             HHHcCCCCCCEEEEECCCHHHHHHHH-HHHHCCC-eEEEEeCCHHHHHHHHHcCCCEEEeCCC--cCHHHHHHH-h--CC
Confidence            98889999999999999999999999 9999999 7899999999999999999999988644  677777766 2  24


Q ss_pred             CCceEEEeCCCCHHHHHHHHHhcccCCEEEEEccCCCCccccchHhhhcCcEEEeeccc-CCcHHHHHHHHHcCCCCCCC
Q 017868          254 TGIDVSFDCAGLNKTMSTALGATCAGGKVCLVGMGHHEMTVPLTPAAVREVDVVGVFRY-KNTWPLCLELLRSGKIDVKP  332 (365)
Q Consensus       254 ~~~d~vid~~g~~~~~~~~~~~l~~~G~~~~~g~~~~~~~~~~~~~~~~~~~i~~~~~~-~~~~~~~~~~l~~g~~~~~~  332 (365)
                       ++|++||++|....+..++++|+++|+++.+|........+...+..+++++.+++.. .+.++++++++++|++.  +
T Consensus       232 -~~d~vid~~g~~~~~~~~~~~l~~~G~iv~~G~~~~~~~~~~~~~~~~~~~i~g~~~~~~~~~~~~~~l~~~g~l~--~  308 (340)
T 3s2e_A          232 -GAHGVLVTAVSPKAFSQAIGMVRRGGTIALNGLPPGDFGTPIFDVVLKGITIRGSIVGTRSDLQESLDFAAHGDVK--A  308 (340)
T ss_dssp             -SEEEEEESSCCHHHHHHHHHHEEEEEEEEECSCCSSEEEEEHHHHHHTTCEEEECCSCCHHHHHHHHHHHHTTSCC--C
T ss_pred             -CCCEEEEeCCCHHHHHHHHHHhccCCEEEEeCCCCCCCCCCHHHHHhCCeEEEEEecCCHHHHHHHHHHHHhCCCC--c
Confidence             8999999999888999999999999999999876655566666788899999998776 56899999999999994  4


Q ss_pred             ceEEEecCChhhHHHHHHHHhcCCCceEEEEeC
Q 017868          333 LVTHRFGFSQKEVEEAFETSARGGTAIKVMFNL  365 (365)
Q Consensus       333 ~~~~~~~~~~~~~~~a~~~~~~~~~~gk~vi~~  365 (365)
                      . .+.|+|  +++.+|++.+++++..||+||++
T Consensus       309 ~-~~~~~l--~~~~~A~~~~~~~~~~Gkvvv~~  338 (340)
T 3s2e_A          309 T-VSTAKL--DDVNDVFGRLREGKVEGRVVLDF  338 (340)
T ss_dssp             C-EEEECG--GGHHHHHHHHHTTCCCSEEEEEC
T ss_pred             e-EEEEeH--HHHHHHHHHHHcCCCceEEEEec
Confidence            3 467788  99999999999999999999975

>1h2b_A Alcohol dehydrogenase; oxidoreductase, archaea, hyperthermophIle, zinc; HET: OCA NAJ; 1.62A {Aeropyrum pernix} SCOP: b.35.1.2 c.2.1.1

Probab=100.00  E-value=2.2e-56  Score=410.74  Aligned_cols=337  Identities=25%  Similarity=0.411  Sum_probs=287.8

Q ss_pred             cchhcceeEEEecCC-ceEEEEecCCC-CCCCcEEEEEeeeeeCcccHhhhhccccCCccCCCCcccCccceEEEEEeCC
Q 017868           13 DGEEVNMAAWLLGVN-TLKIQPFELPS-LGPYDVLVRMKAVGICGSDVHYLKTLRCADFVVKEPMVIGHECAGVIEKVGS   90 (365)
Q Consensus        13 ~~~~~~~~~~~~~~~-~l~~~~~~~p~-~~~~eVlI~v~~~~l~~~D~~~~~g~~~~~~~~~~p~~~G~e~~G~V~~vG~   90 (365)
                      +.+.+||++++.+++ ++++.++|.|+ |+++||+|||.++++|++|++.+.|.........+|.++|||++|+|+++|+
T Consensus        11 ~~~~~mka~~~~~~g~~l~~~~~p~P~~~~~~eVlVkv~a~gi~~~D~~~~~g~~~~~~~~~~p~v~G~E~~G~V~~vG~   90 (359)
T 1h2b_A           11 LGVERLKAARLHEYNKPLRIEDVDYPRLEGRFDVIVRIAGAGVCHTDLHLVQGMWHELLQPKLPYTLGHENVGYIEEVAE   90 (359)
T ss_dssp             ------CEEEESSTTSCCEEECCCCCCCBTTBCEEEEEEEEECCHHHHHHHHTTTHHHHCCCSSEECCCCEEEEEEEECT
T ss_pred             CChhhceEEEEecCCCCcEEEEccCCCCCCCCEEEEEEEEEEecccchHHHhCCCccccCCCCCeecCcCceEEEEEECC
Confidence            346679999999874 79999999999 9999999999999999999999887432101236799999999999999999


Q ss_pred             CCCCCCCCCEEEEcCCcCCCCCccccCCCCCCCCCccccccCCCCcceeeEEeecCCceEECCCCCCcchhc---cch-h
Q 017868           91 EVKTLVPGDRVALEPGISCWRCDHCKGGRYNLCPEMKFFATPPVHGSLANQVVHPADLCFKLPDNVSLEEGA---MCE-P  166 (365)
Q Consensus        91 ~v~~~~~Gd~V~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~v~~~~~~~iP~~~~~~~a~---~~~-~  166 (365)
                      +|++|++||||++.+..+|++|++|+.+++++|++....+. ..+|+|+||+++++++++++|+++++++|+   .++ .
T Consensus        91 ~v~~~~vGdrV~~~~~~~Cg~C~~C~~g~~~~C~~~~~~G~-~~~G~~aey~~v~~~~~~~iP~~~~~~~aa~~~~l~~~  169 (359)
T 1h2b_A           91 GVEGLEKGDPVILHPAVTDGTCLACRAGEDMHCENLEFPGL-NIDGGFAEFMRTSHRSVIKLPKDISREKLVEMAPLADA  169 (359)
T ss_dssp             TCCSCCTTCEEEECSCBCCSCSHHHHTTCGGGCTTCBCBTT-TBCCSSBSEEEECGGGEEECCTTCCHHHHHHTGGGGTH
T ss_pred             CCCCCCCCCEEEeCCCCCCCCChhhhCcCcccCCCcccccc-CCCCcccceEEechHhEEECCCCCCHHHHhhccchhhh
Confidence            99999999999999999999999999999999998776664 457999999999999999999999999998   444 5


Q ss_pred             hHHHHHHHHh--cCCCCCCEEEEEcCCHHHHHHHHHHHHHC-CCCeEEEEeCChhHHHHHHHcCCCEEEeCCCCcccHHH
Q 017868          167 LSVGLHACRR--ANIGPETNVLIMGAGPIGLVTMLGAPRAF-GAPRIVIVDVDDYRLSVAKEIGADNIVKVSTNLQDIAE  243 (365)
Q Consensus       167 ~~~a~~~~~~--~~~~~g~~vlI~G~g~~G~~ai~~l~~~~-g~~~vi~v~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~  243 (365)
                      ..|||++++.  +++++|++|||+|+|++|++++| +++.+ |+ +|++++++++|.++++++|+++++++.+  + +.+
T Consensus       170 ~~ta~~al~~~~~~~~~g~~VlV~GaG~vG~~avq-lak~~~Ga-~Vi~~~~~~~~~~~~~~lGa~~vi~~~~--~-~~~  244 (359)
T 1h2b_A          170 GITAYRAVKKAARTLYPGAYVAIVGVGGLGHIAVQ-LLKVMTPA-TVIALDVKEEKLKLAERLGADHVVDARR--D-PVK  244 (359)
T ss_dssp             HHHHHHHHHHHHTTCCTTCEEEEECCSHHHHHHHH-HHHHHCCC-EEEEEESSHHHHHHHHHTTCSEEEETTS--C-HHH
T ss_pred             HHHHHHHHHhhccCCCCCCEEEEECCCHHHHHHHH-HHHHcCCC-eEEEEeCCHHHHHHHHHhCCCEEEeccc--h-HHH
Confidence            6789999976  89999999999999999999999 89999 99 6899999999999999999999988653  3 667


Q ss_pred             HHHHHHHHhCCCceEEEeCCCCHH--HHHHHHHhcccCCEEEEEccCCCCccccchHhhhcCcEEEeeccc-CCcHHHHH
Q 017868          244 EVEKIQKAMGTGIDVSFDCAGLNK--TMSTALGATCAGGKVCLVGMGHHEMTVPLTPAAVREVDVVGVFRY-KNTWPLCL  320 (365)
Q Consensus       244 ~i~~~~~~~~~~~d~vid~~g~~~--~~~~~~~~l~~~G~~~~~g~~~~~~~~~~~~~~~~~~~i~~~~~~-~~~~~~~~  320 (365)
                      .+++++.  +.++|+|||++|.+.  .+..++++  ++|+++.+|..... .++...+..+++++.+++.. .+.+++++
T Consensus       245 ~v~~~~~--g~g~Dvvid~~G~~~~~~~~~~~~~--~~G~~v~~g~~~~~-~~~~~~~~~~~~~i~g~~~~~~~~~~~~~  319 (359)
T 1h2b_A          245 QVMELTR--GRGVNVAMDFVGSQATVDYTPYLLG--RMGRLIIVGYGGEL-RFPTIRVISSEVSFEGSLVGNYVELHELV  319 (359)
T ss_dssp             HHHHHTT--TCCEEEEEESSCCHHHHHHGGGGEE--EEEEEEECCCSSCC-CCCHHHHHHTTCEEEECCSCCHHHHHHHH
T ss_pred             HHHHHhC--CCCCcEEEECCCCchHHHHHHHhhc--CCCEEEEEeCCCCC-CCCHHHHHhCCcEEEEecCCCHHHHHHHH
Confidence            7766542  458999999999876  77777777  89999999865444 55555678899999998765 56789999


Q ss_pred             HHHHcCCCCCCCceEEEecCChhhHHHHHHHHhcCCCceEEEEeC
Q 017868          321 ELLRSGKIDVKPLVTHRFGFSQKEVEEAFETSARGGTAIKVMFNL  365 (365)
Q Consensus       321 ~~l~~g~~~~~~~~~~~~~~~~~~~~~a~~~~~~~~~~gk~vi~~  365 (365)
                      +++++|.+  ++.+ ++|+|  +++++|++.+++++..||+|+++
T Consensus       320 ~l~~~g~l--~~~i-~~~~l--~~~~~A~~~~~~~~~~gKvvv~~  359 (359)
T 1h2b_A          320 TLALQGKV--RVEV-DIHKL--DEINDVLERLEKGEVLGRAVLIP  359 (359)
T ss_dssp             HHHHTTSC--CCCE-EEEEG--GGHHHHHHHHHTTCCSSEEEEEC
T ss_pred             HHHHcCCC--cceE-EEEeH--HHHHHHHHHHHcCCCceEEEeeC
Confidence            99999998  5667 89999  99999999999988889999974

>1e3i_A Alcohol dehydrogenase, class II; HET: NAD; 2.08A {Mus musculus} SCOP: b.35.1.2 c.2.1.1 PDB: 1e3e_A* 1e3l_A* 3cos_A*

Probab=100.00  E-value=9.5e-56  Score=409.35  Aligned_cols=339  Identities=25%  Similarity=0.428  Sum_probs=292.3

Q ss_pred             hhcceeEEEecCC-ceEEEEecCCCCCCCcEEEEEeeeeeCcccHhhhhccccCCccCCCCcccCccceEEEEEeCCCCC
Q 017868           15 EEVNMAAWLLGVN-TLKIQPFELPSLGPYDVLVRMKAVGICGSDVHYLKTLRCADFVVKEPMVIGHECAGVIEKVGSEVK   93 (365)
Q Consensus        15 ~~~~~~~~~~~~~-~l~~~~~~~p~~~~~eVlI~v~~~~l~~~D~~~~~g~~~~~~~~~~p~~~G~e~~G~V~~vG~~v~   93 (365)
                      +++||++++.+++ +++++++|.|+|+++||+|||.+++||++|++.+.|. .   ...+|.++|||++|+|+++|++|+
T Consensus         6 p~~mka~~~~~~g~~l~~~~~~~p~~~~~eVlVkv~a~gi~~~D~~~~~g~-~---~~~~P~v~GhE~~G~V~~vG~~v~   81 (376)
T 1e3i_A            6 VIKCKAAIAWKTGSPLCIEEIEVSPPKACEVRIQVIATCVCPTDINATDPK-K---KALFPVVLGHECAGIVESVGPGVT   81 (376)
T ss_dssp             CEEEEEEEBCSTTSCCEEEEEEECCCCTTEEEEEEEEEECCHHHHHTTCTT-S---CCCSSBCCCCEEEEEEEEECTTCC
T ss_pred             ChheeEEEEecCCCCeEEEEeeCCCCCCCeEEEEEeEEeEchhhHHHhcCC-C---CCCCCcccCccccEEEEEECCCCc
Confidence            4578999999875 6999999999999999999999999999999988774 1   245799999999999999999999


Q ss_pred             CCCCCCEEEEcCCcCCCCCccccCCCCCCCCCcc----c---cccC-----------------CCCcceeeEEeecCCce
Q 017868           94 TLVPGDRVALEPGISCWRCDHCKGGRYNLCPEMK----F---FATP-----------------PVHGSLANQVVHPADLC  149 (365)
Q Consensus        94 ~~~~Gd~V~~~~~~~~~~~~~~~~~~~~~~~~~~----~---~~~~-----------------~~~g~~~~~~~v~~~~~  149 (365)
                      +|++||||++.+..+|++|++|+.+++++|++..    +   .+..                 ...|+|+||++++++++
T Consensus        82 ~~~vGdrV~~~~~~~Cg~C~~C~~g~~~~C~~~~~~~~~~~~~G~~~~g~~~~~~~g~~~~~~~~~G~~aey~~v~~~~~  161 (376)
T 1e3i_A           82 NFKPGDKVIPFFAPQCKRCKLCLSPLTNLCGKLRNFKYPTIDQELMEDRTSRFTCKGRSIYHFMGVSSFSQYTVVSEANL  161 (376)
T ss_dssp             SCCTTCEEEECSSCCCSSSHHHHCTTCCCCTTCCCSSCGGGSSCSCTTSCCSEEETTEEEBCCTTTCCSBSEEEEEGGGE
T ss_pred             cCCCCCEEEECCcCCCCCCccccCCCcccCcCcCccccccccccccccCccccccCCcccccccCCccceeEEEeccccE
Confidence            9999999999999999999999999999998754    1   0110                 02499999999999999


Q ss_pred             EECCCCCCcchhccch-hhHHHHHHH-HhcCCCCCCEEEEEcCCHHHHHHHHHHHHHCCCCeEEEEeCChhHHHHHHHcC
Q 017868          150 FKLPDNVSLEEGAMCE-PLSVGLHAC-RRANIGPETNVLIMGAGPIGLVTMLGAPRAFGAPRIVIVDVDDYRLSVAKEIG  227 (365)
Q Consensus       150 ~~iP~~~~~~~a~~~~-~~~~a~~~~-~~~~~~~g~~vlI~G~g~~G~~ai~~l~~~~g~~~vi~v~~~~~~~~~~~~~g  227 (365)
                      +++|+++++++|+.++ ++.|||+++ +.+++++|++|||+|+|++|++++| +++.+|+++|++++++++|.++++++|
T Consensus       162 ~~iP~~l~~~~aa~l~~~~~ta~~~l~~~~~~~~g~~VlV~GaG~vG~~aiq-lak~~Ga~~Vi~~~~~~~~~~~a~~lG  240 (376)
T 1e3i_A          162 ARVDDEANLERVCLIGCGFSSGYGAAINTAKVTPGSTCAVFGLGCVGLSAII-GCKIAGASRIIAIDINGEKFPKAKALG  240 (376)
T ss_dssp             EECCTTCCHHHHGGGGTHHHHHHHHHHTTSCCCTTCEEEEECCSHHHHHHHH-HHHHTTCSEEEEECSCGGGHHHHHHTT
T ss_pred             EECCCCCCHHHhhhhccHHHHHHHHHHHhcCCCCCCEEEEECCCHHHHHHHH-HHHHcCCCeEEEEcCCHHHHHHHHHhC
Confidence            9999999999999887 788999987 5689999999999999999999999 999999977999999999999999999


Q ss_pred             CCEEEeCCCCcccHHHHHHHHHHHhCCCceEEEeCCCCHHHHHHHHHhcccC-CEEEEEccCCCCccccchHhhhcCcEE
Q 017868          228 ADNIVKVSTNLQDIAEEVEKIQKAMGTGIDVSFDCAGLNKTMSTALGATCAG-GKVCLVGMGHHEMTVPLTPAAVREVDV  306 (365)
Q Consensus       228 ~~~~~~~~~~~~~~~~~i~~~~~~~~~~~d~vid~~g~~~~~~~~~~~l~~~-G~~~~~g~~~~~~~~~~~~~~~~~~~i  306 (365)
                      ++.++++.+..+++.+.+++.+   ++++|+|||++|....+..++++++++ |+++.+|.......++...+..++ ++
T Consensus       241 a~~vi~~~~~~~~~~~~v~~~~---~~g~Dvvid~~G~~~~~~~~~~~l~~~~G~iv~~G~~~~~~~~~~~~~~~~~-~i  316 (376)
T 1e3i_A          241 ATDCLNPRELDKPVQDVITELT---AGGVDYSLDCAGTAQTLKAAVDCTVLGWGSCTVVGAKVDEMTIPTVDVILGR-SI  316 (376)
T ss_dssp             CSEEECGGGCSSCHHHHHHHHH---TSCBSEEEESSCCHHHHHHHHHTBCTTTCEEEECCCSSSEEEEEHHHHHTTC-EE
T ss_pred             CcEEEccccccchHHHHHHHHh---CCCccEEEECCCCHHHHHHHHHHhhcCCCEEEEECCCCCccccCHHHhhccC-eE
Confidence            9998876532356777777764   349999999999877889999999999 999999874434445555566777 99


Q ss_pred             Eeeccc----CCcHHHHHHHHHcCCCCCCCceEEEecCChhhHHHHHHHHhcCCCceEEEEeC
Q 017868          307 VGVFRY----KNTWPLCLELLRSGKIDVKPLVTHRFGFSQKEVEEAFETSARGGTAIKVMFNL  365 (365)
Q Consensus       307 ~~~~~~----~~~~~~~~~~l~~g~~~~~~~~~~~~~~~~~~~~~a~~~~~~~~~~gk~vi~~  365 (365)
                      .+++..    .+.++++++++++|++.+.+.++++|+|  +++.+|++.+++++ .+|+||++
T Consensus       317 ~g~~~~~~~~~~~~~~~~~l~~~g~i~~~~~i~~~~~l--~~~~~A~~~~~~~~-~~Kvvi~~  376 (376)
T 1e3i_A          317 NGTFFGGWKSVDSVPNLVSDYKNKKFDLDLLVTHALPF--ESINDAIDLMKEGK-SIRTILTF  376 (376)
T ss_dssp             EECSGGGCCHHHHHHHHHHHHHTTSSCGGGGEEEEEEG--GGHHHHHHHHHTTC-CSEEEEEC
T ss_pred             EEEecCCCCcHHHHHHHHHHHHcCCCCcHHhEeeeecH--HHHHHHHHHHhcCC-cceEEEeC
Confidence            987643    3578999999999999777888999999  99999999998876 57999875

>1cdo_A Alcohol dehydrogenase; oxidoreductase, oxidoreductase (CH-OH(D)-NAD(A)); HET: NAD; 2.05A {Gadus callarias} SCOP: b.35.1.2 c.2.1.1

Probab=100.00  E-value=2.2e-55  Score=406.59  Aligned_cols=340  Identities=23%  Similarity=0.367  Sum_probs=292.0

Q ss_pred             chhcceeEEEecCC-ceEEEEecCCCCCCCcEEEEEeeeeeCcccHh-hhhccccCCccCCCCcccCccceEEEEEeCCC
Q 017868           14 GEEVNMAAWLLGVN-TLKIQPFELPSLGPYDVLVRMKAVGICGSDVH-YLKTLRCADFVVKEPMVIGHECAGVIEKVGSE   91 (365)
Q Consensus        14 ~~~~~~~~~~~~~~-~l~~~~~~~p~~~~~eVlI~v~~~~l~~~D~~-~~~g~~~~~~~~~~p~~~G~e~~G~V~~vG~~   91 (365)
                      .+++||++++.+++ ++++.++|.|+|+++||+|||.+++||++|++ .+.|...    ..+|.++|||++|+|+++|++
T Consensus         5 ~~~~mka~~~~~~~~~l~~~~~~~p~~~~~eVlVkv~a~gi~~~D~~~~~~g~~~----~~~P~v~GhE~~G~V~~vG~~   80 (374)
T 1cdo_A            5 KVIKCKAAVAWEANKPLVIEEIEVDVPHANEIRIKIIATGVCHTDLYHLFEGKHK----DGFPVVLGHEGAGIVESVGPG   80 (374)
T ss_dssp             SCEEEEEEEBCSTTSCCEEEEEEECCCCTTEEEEEEEEEECCHHHHHHHHTTCCT----TSCSEECCCCEEEEEEEECTT
T ss_pred             CcceeEEEEEecCCCCeEEEEeeCCCCCCCEEEEEEeEEeechhhHHHHhCCCCC----CCCCcccCccceEEEEEECCC
Confidence            34578999998875 69999999999999999999999999999999 8876432    457899999999999999999


Q ss_pred             CCCCCCCCEEEEcCCcCCCCCccccCCCCCCCCCcccc---ccC-----------------CCCcceeeEEeecCCceEE
Q 017868           92 VKTLVPGDRVALEPGISCWRCDHCKGGRYNLCPEMKFF---ATP-----------------PVHGSLANQVVHPADLCFK  151 (365)
Q Consensus        92 v~~~~~Gd~V~~~~~~~~~~~~~~~~~~~~~~~~~~~~---~~~-----------------~~~g~~~~~~~v~~~~~~~  151 (365)
                      |++|++||||++.+..+|++|.+|+.+++++|++....   +..                 ...|+|+||++++++++++
T Consensus        81 V~~~~vGdrV~~~~~~~Cg~C~~C~~g~~~~C~~~~~~~~~G~~~~g~~~~~~~g~~~~~~~~~G~~aey~~v~~~~~~~  160 (374)
T 1cdo_A           81 VTEFQPGEKVIPLFISQCGECRFCQSPKTNQCVKGWANESPDVMSPKETRFTCKGRKVLQFLGTSTFSQYTVVNQIAVAK  160 (374)
T ss_dssp             CCSCCTTCEEEECSSCCCSSSHHHHCTTCCCCSCSGGGTCTTTTSCSCCCEEETTEEEEEGGGTCCSBSEEEEEGGGEEE
T ss_pred             CccCCCCCEEEeCCCCCCCCChhhcCCCcCcCCCcccccccccccCCccccccCCcccccccCCccceeEEEEchhheEE
Confidence            99999999999999999999999999999999876432   110                 0249999999999999999


Q ss_pred             CCCCCCcchhccch-hhHHHHHHH-HhcCCCCCCEEEEEcCCHHHHHHHHHHHHHCCCCeEEEEeCChhHHHHHHHcCCC
Q 017868          152 LPDNVSLEEGAMCE-PLSVGLHAC-RRANIGPETNVLIMGAGPIGLVTMLGAPRAFGAPRIVIVDVDDYRLSVAKEIGAD  229 (365)
Q Consensus       152 iP~~~~~~~a~~~~-~~~~a~~~~-~~~~~~~g~~vlI~G~g~~G~~ai~~l~~~~g~~~vi~v~~~~~~~~~~~~~g~~  229 (365)
                      +|+++++++|+.++ ++.|||+++ +.+++++|++|||+|+|++|++++| +++.+|+++|+++++++++.++++++|++
T Consensus       161 ~P~~~~~~~aa~l~~~~~ta~~~l~~~~~~~~g~~VlV~GaG~vG~~a~q-la~~~Ga~~Vi~~~~~~~~~~~~~~lGa~  239 (374)
T 1cdo_A          161 IDPSAPLDTVCLLGCGVSTGFGAAVNTAKVEPGSTCAVFGLGAVGLAAVM-GCHSAGAKRIIAVDLNPDKFEKAKVFGAT  239 (374)
T ss_dssp             CCTTCCHHHHGGGGTHHHHHHHHHHTTTCCCTTCEEEEECCSHHHHHHHH-HHHHTTCSEEEEECSCGGGHHHHHHTTCC
T ss_pred             CCCCCCHHHHhhhccHHHHHHHHHHhccCCCCCCEEEEECCCHHHHHHHH-HHHHcCCCEEEEEcCCHHHHHHHHHhCCc
Confidence            99999999999987 788999987 5689999999999999999999999 99999997799999999999999999999


Q ss_pred             EEEeCCCCcccHHHHHHHHHHHhCCCceEEEeCCCCHHHHHHHHHhcccC-CEEEEEccCCC-CccccchHhhhcCcEEE
Q 017868          230 NIVKVSTNLQDIAEEVEKIQKAMGTGIDVSFDCAGLNKTMSTALGATCAG-GKVCLVGMGHH-EMTVPLTPAAVREVDVV  307 (365)
Q Consensus       230 ~~~~~~~~~~~~~~~i~~~~~~~~~~~d~vid~~g~~~~~~~~~~~l~~~-G~~~~~g~~~~-~~~~~~~~~~~~~~~i~  307 (365)
                      .++++.+..+++.+.+++.+   ++++|+|||++|....+..++++++++ |+++.+|.... ...++...+..+. ++.
T Consensus       240 ~vi~~~~~~~~~~~~~~~~~---~~g~D~vid~~g~~~~~~~~~~~l~~~~G~iv~~G~~~~~~~~~~~~~~~~~~-~i~  315 (374)
T 1cdo_A          240 DFVNPNDHSEPISQVLSKMT---NGGVDFSLECVGNVGVMRNALESCLKGWGVSVLVGWTDLHDVATRPIQLIAGR-TWK  315 (374)
T ss_dssp             EEECGGGCSSCHHHHHHHHH---TSCBSEEEECSCCHHHHHHHHHTBCTTTCEEEECSCCSSSCEEECHHHHHTTC-EEE
T ss_pred             eEEeccccchhHHHHHHHHh---CCCCCEEEECCCCHHHHHHHHHHhhcCCcEEEEEcCCCCCCcccCHHHHhcCC-eEE
Confidence            98876532356777777664   348999999999877889999999999 99999986543 3344444566677 899


Q ss_pred             eeccc----CCcHHHHHHHHHcCCCCCCCceEEEecCChhhHHHHHHHHhcCCCceEEEEeC
Q 017868          308 GVFRY----KNTWPLCLELLRSGKIDVKPLVTHRFGFSQKEVEEAFETSARGGTAIKVMFNL  365 (365)
Q Consensus       308 ~~~~~----~~~~~~~~~~l~~g~~~~~~~~~~~~~~~~~~~~~a~~~~~~~~~~gk~vi~~  365 (365)
                      +++..    .+.++++++++++|++.+.++++++|+|  +++.+|++.+++++. +|+||++
T Consensus       316 g~~~~~~~~~~~~~~~~~l~~~g~l~~~~~i~~~~~l--~~~~~A~~~~~~~~~-~kvvi~~  374 (374)
T 1cdo_A          316 GSMFGGFKGKDGVPKMVKAYLDKKVKLDEFITHRMPL--ESVNDAIDLMKHGKC-IRTVLSL  374 (374)
T ss_dssp             ECSGGGCCHHHHHHHHHHHHHTTSSCCGGGEEEEEEG--GGHHHHHHHHHTTCC-SEEEEEC
T ss_pred             EEecCCCCcHHHHHHHHHHHHcCCCChHHheeeEecH--HHHHHHHHHHHCCCe-eEEEEeC
Confidence            87643    3578999999999999777888999999  999999999988764 7999875

>1f8f_A Benzyl alcohol dehydrogenase; rossmann fold, oxidoreductase; HET: NAD; 2.20A {Acinetobacter calcoaceticus} SCOP: b.35.1.2 c.2.1.1

Probab=100.00  E-value=5.6e-56  Score=410.14  Aligned_cols=336  Identities=26%  Similarity=0.414  Sum_probs=290.9

Q ss_pred             hhcceeEEEecCC-ceEEEEecCCCCCCCcEEEEEeeeeeCcccHhhhhccccCCccCCCCcccCccceEEEEEeCCCCC
Q 017868           15 EEVNMAAWLLGVN-TLKIQPFELPSLGPYDVLVRMKAVGICGSDVHYLKTLRCADFVVKEPMVIGHECAGVIEKVGSEVK   93 (365)
Q Consensus        15 ~~~~~~~~~~~~~-~l~~~~~~~p~~~~~eVlI~v~~~~l~~~D~~~~~g~~~~~~~~~~p~~~G~e~~G~V~~vG~~v~   93 (365)
                      +++||++++.+++ +++++++|.|+|+++||+|||.++++|++|++.+.|..    +..+|.++|||++|+|+++|++|+
T Consensus         4 ~~~mka~~~~~~g~~l~~~~~~~P~~~~~eVlVkv~a~gi~~~D~~~~~g~~----~~~~P~v~GhE~~G~V~~vG~~v~   79 (371)
T 1f8f_A            4 LKDIIAAVTPCKGADFELQALKIRQPQGDEVLVKVVATGMCHTDLIVRDQKY----PVPLPAVLGHEGSGIIEAIGPNVT   79 (371)
T ss_dssp             CEEEEEEEBCSTTCCCEEEEEEECCCCTTEEEEEEEEEECCHHHHHHHTTSS----CCCSSBCCCCEEEEEEEEECTTCC
T ss_pred             cccceEEEEcCCCCCeEEEEecCCCCCCCEEEEEEEEeecCchhHHHHcCCC----CCCCCcccCcccceEEEEeCCCCC
Confidence            3468999998875 69999999999999999999999999999999988743    245799999999999999999999


Q ss_pred             CCCCCCEEEEcCCcCCCCCccccCCCCCCCCCcccccc----------------------CCCCcceeeEEeecCCceEE
Q 017868           94 TLVPGDRVALEPGISCWRCDHCKGGRYNLCPEMKFFAT----------------------PPVHGSLANQVVHPADLCFK  151 (365)
Q Consensus        94 ~~~~Gd~V~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~----------------------~~~~g~~~~~~~v~~~~~~~  151 (365)
                      +|++||||++.+ .+|++|++|+.+++++|++....+.                      ....|+|+||++++++++++
T Consensus        80 ~~~~GdrV~~~~-~~Cg~C~~C~~g~~~~C~~~~~~~~~g~~~~g~~~~~~~~g~~~~~~~~~~G~~aey~~v~~~~~~~  158 (371)
T 1f8f_A           80 ELQVGDHVVLSY-GYCGKCTQCNTGNPAYCSEFFGRNFSGADSEGNHALCTHDQGVVNDHFFAQSSFATYALSRENNTVK  158 (371)
T ss_dssp             SCCTTCEEEECC-CCCSSSHHHHTTCGGGCTTHHHHSSSSSCSSSCCSBC------CBCCGGGTCCSBSEEEEEGGGEEE
T ss_pred             CCCCCCEEEecC-CCCCCChhhhCcCccccccccccccccccccccccccccCCccccccccCCccccCeEEechhheEE
Confidence            999999999998 9999999999999999987542110                      01258999999999999999


Q ss_pred             CCCCCCcchhccch-hhHHHHHHH-HhcCCCCCCEEEEEcCCHHHHHHHHHHHHHCCCCeEEEEeCChhHHHHHHHcCCC
Q 017868          152 LPDNVSLEEGAMCE-PLSVGLHAC-RRANIGPETNVLIMGAGPIGLVTMLGAPRAFGAPRIVIVDVDDYRLSVAKEIGAD  229 (365)
Q Consensus       152 iP~~~~~~~a~~~~-~~~~a~~~~-~~~~~~~g~~vlI~G~g~~G~~ai~~l~~~~g~~~vi~v~~~~~~~~~~~~~g~~  229 (365)
                      +|+++++++|+.++ ++.|||+++ +.+++++|++|||+|+|++|++++| +++.+|+++|++++++++|.++++++|++
T Consensus       159 iP~~~~~~~aa~l~~~~~ta~~al~~~~~~~~g~~VlV~GaG~vG~~a~q-lak~~Ga~~Vi~~~~~~~~~~~a~~lGa~  237 (371)
T 1f8f_A          159 VTKDVPIELLGPLGCGIQTGAGACINALKVTPASSFVTWGAGAVGLSALL-AAKVCGASIIIAVDIVESRLELAKQLGAT  237 (371)
T ss_dssp             ECTTSCGGGTGGGGTHHHHHHHHHHTTTCCCTTCEEEEESCSHHHHHHHH-HHHHHTCSEEEEEESCHHHHHHHHHHTCS
T ss_pred             CCCCCCHHHHHHhcchHHHHHHHHHhccCCCCCCEEEEECCCHHHHHHHH-HHHHcCCCeEEEECCCHHHHHHHHHcCCC
Confidence            99999999999887 889999998 5789999999999999999999999 99999997789999999999999999999


Q ss_pred             EEEeCCCCcccHHHHHHHHHHHhCCCceEEEeCCCCHHHHHHHHHhcccCCEEEEEccCCC--CccccchHhhhcCcEEE
Q 017868          230 NIVKVSTNLQDIAEEVEKIQKAMGTGIDVSFDCAGLNKTMSTALGATCAGGKVCLVGMGHH--EMTVPLTPAAVREVDVV  307 (365)
Q Consensus       230 ~~~~~~~~~~~~~~~i~~~~~~~~~~~d~vid~~g~~~~~~~~~~~l~~~G~~~~~g~~~~--~~~~~~~~~~~~~~~i~  307 (365)
                      .++++..  +++.+.+++.+   ++++|+|||++|....+..++++|+++|+++.+|....  ...++...+..+++++.
T Consensus       238 ~vi~~~~--~~~~~~~~~~~---~gg~D~vid~~g~~~~~~~~~~~l~~~G~iv~~G~~~~~~~~~~~~~~~~~~~~~i~  312 (371)
T 1f8f_A          238 HVINSKT--QDPVAAIKEIT---DGGVNFALESTGSPEILKQGVDALGILGKIAVVGAPQLGTTAQFDVNDLLLGGKTIL  312 (371)
T ss_dssp             EEEETTT--SCHHHHHHHHT---TSCEEEEEECSCCHHHHHHHHHTEEEEEEEEECCCCSTTCCCCCCHHHHHHTTCEEE
T ss_pred             EEecCCc--cCHHHHHHHhc---CCCCcEEEECCCCHHHHHHHHHHHhcCCEEEEeCCCCCCCccccCHHHHHhCCCEEE
Confidence            9988643  57777776653   34899999999987788999999999999999986542  23455556778999999


Q ss_pred             eeccc----CCcHHHHHHHHHcCCCCCCCceEEEecCChhhHHHHHHHHhcCCCceEEEEeC
Q 017868          308 GVFRY----KNTWPLCLELLRSGKIDVKPLVTHRFGFSQKEVEEAFETSARGGTAIKVMFNL  365 (365)
Q Consensus       308 ~~~~~----~~~~~~~~~~l~~g~~~~~~~~~~~~~~~~~~~~~a~~~~~~~~~~gk~vi~~  365 (365)
                      +++..    .+.++++++++++|++.+.+.+++ |+|  +++.+|++.+++++. +|+||++
T Consensus       313 g~~~~~~~~~~~~~~~~~l~~~g~l~~~~~i~~-~~l--~~~~~A~~~~~~~~~-~Kvvv~~  370 (371)
T 1f8f_A          313 GVVEGSGSPKKFIPELVRLYQQGKFPFDQLVKF-YAF--DEINQAAIDSRKGIT-LKPIIKI  370 (371)
T ss_dssp             ECSGGGSCHHHHHHHHHHHHHTTSCCGGGGEEE-EEG--GGHHHHHHHHHHTSC-SEEEEEC
T ss_pred             EeCCCCCchHHHHHHHHHHHHcCCCCcccceeE-ecH--HHHHHHHHHHHCCCc-eEEEEee
Confidence            97653    356899999999999976677888 999  999999999988765 7999875

>3jv7_A ADH-A; dehydrogenase, nucleotide binding, rossmann-fold, oxidoreduc; HET: NAD; 2.00A {Rhodococcus ruber} PDB: 2xaa_A*

Probab=100.00  E-value=1.1e-55  Score=404.44  Aligned_cols=334  Identities=25%  Similarity=0.401  Sum_probs=291.4

Q ss_pred             ceeEEEecCCc-eEEEEecCCCCCCCcEEEEEeeeeeCcccHhhhhccccCCccCCCCcccCccceEEEEEeCCCCCCCC
Q 017868           18 NMAAWLLGVNT-LKIQPFELPSLGPYDVLVRMKAVGICGSDVHYLKTLRCADFVVKEPMVIGHECAGVIEKVGSEVKTLV   96 (365)
Q Consensus        18 ~~~~~~~~~~~-l~~~~~~~p~~~~~eVlI~v~~~~l~~~D~~~~~g~~~~~~~~~~p~~~G~e~~G~V~~vG~~v~~~~   96 (365)
                      ||++++.+++. ++++++|.|+|+++||+|||.++++|++|++.+.|... .....+|.++|||++|+|+++|++|++|+
T Consensus         1 MkA~~~~~~g~~l~~~~~~~P~~~~~eVlVkv~a~gi~~~D~~~~~g~~~-~~~~~~p~i~G~e~~G~V~~vG~~v~~~~   79 (345)
T 3jv7_A            1 MKAVQYTEIGSEPVVVDIPTPTPGPGEILLKVTAAGLCHSDIFVMDMPAA-QYAYGLPLTLGHEGVGTVAELGEGVTGFG   79 (345)
T ss_dssp             CEEEEECSTTSCCEEEECCCCCCCTTCEEEEEEEEECCHHHHHHHHSCTT-TCCSCSSEECCSEEEEEEEEECTTCCSCC
T ss_pred             CeEEEEcCCCCceEEEEecCCCCCCCeEEEEEEEEeeCHHHHHHHcCCCC-ccCCCCCcccCcccEEEEEEECCCCCCCC
Confidence            78999998765 99999999999999999999999999999999987542 22357799999999999999999999999


Q ss_pred             CCCEEEEcCCcCCCCCccccCCCCCCCCCcccc----ccCCCCcceeeEEeec-CCceEECCCCCCcchhccch-hhHHH
Q 017868           97 PGDRVALEPGISCWRCDHCKGGRYNLCPEMKFF----ATPPVHGSLANQVVHP-ADLCFKLPDNVSLEEGAMCE-PLSVG  170 (365)
Q Consensus        97 ~Gd~V~~~~~~~~~~~~~~~~~~~~~~~~~~~~----~~~~~~g~~~~~~~v~-~~~~~~iP~~~~~~~a~~~~-~~~~a  170 (365)
                      +||||++.+..+|++|.+|+.+++++|.+....    .....+|+|+||++++ ++.++++|+ +++++|+.++ ++.||
T Consensus        80 vGdrV~~~~~~~cg~C~~c~~g~~~~c~~~~~~~~~~~g~~~~G~~aey~~v~~~~~~~~~p~-~~~~~aa~l~~~~~ta  158 (345)
T 3jv7_A           80 VGDAVAVYGPWGCGACHACARGRENYCTRAADLGITPPGLGSPGSMAEYMIVDSARHLVPIGD-LDPVAAAPLTDAGLTP  158 (345)
T ss_dssp             TTCEEEECCSCCCSSSHHHHTTCGGGCSSHHHHTCCCBTTTBCCSSBSEEEESCGGGEEECTT-CCHHHHGGGGTTTHHH
T ss_pred             CCCEEEEecCCCCCCChHHHCcCcCcCccccccccccCCcCCCceeeEEEEecchhceEeCCC-CCHHHhhhhhhhHHHH
Confidence            999999999999999999999999999433222    1123579999999999 899999999 9999999776 88999


Q ss_pred             HHHHHhc--CCCCCCEEEEEcCCHHHHHHHHHHHHHCCCCeEEEEeCChhHHHHHHHcCCCEEEeCCCCcccHHHHHHHH
Q 017868          171 LHACRRA--NIGPETNVLIMGAGPIGLVTMLGAPRAFGAPRIVIVDVDDYRLSVAKEIGADNIVKVSTNLQDIAEEVEKI  248 (365)
Q Consensus       171 ~~~~~~~--~~~~g~~vlI~G~g~~G~~ai~~l~~~~g~~~vi~v~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~i~~~  248 (365)
                      |++++..  ++++|++|||+|+|++|++++| +++..|..+|++++++++|.++++++|++.+++++.   ++.+.+++.
T Consensus       159 ~~~l~~~~~~~~~g~~vlv~GaG~vG~~a~q-la~~~g~~~Vi~~~~~~~~~~~~~~lGa~~~i~~~~---~~~~~v~~~  234 (345)
T 3jv7_A          159 YHAISRVLPLLGPGSTAVVIGVGGLGHVGIQ-ILRAVSAARVIAVDLDDDRLALAREVGADAAVKSGA---GAADAIREL  234 (345)
T ss_dssp             HHHHHTTGGGCCTTCEEEEECCSHHHHHHHH-HHHHHCCCEEEEEESCHHHHHHHHHTTCSEEEECST---THHHHHHHH
T ss_pred             HHHHHHhccCCCCCCEEEEECCCHHHHHHHH-HHHHcCCCEEEEEcCCHHHHHHHHHcCCCEEEcCCC---cHHHHHHHH
Confidence            9999764  8999999999999999999999 888886558999999999999999999999988642   677777776


Q ss_pred             HHHhCCCceEEEeCCCCHHHHHHHHHhcccCCEEEEEccCCC-CccccchHhhhcCcEEEeeccc-CCcHHHHHHHHHcC
Q 017868          249 QKAMGTGIDVSFDCAGLNKTMSTALGATCAGGKVCLVGMGHH-EMTVPLTPAAVREVDVVGVFRY-KNTWPLCLELLRSG  326 (365)
Q Consensus       249 ~~~~~~~~d~vid~~g~~~~~~~~~~~l~~~G~~~~~g~~~~-~~~~~~~~~~~~~~~i~~~~~~-~~~~~~~~~~l~~g  326 (365)
                      +.  +.++|+|||++|.+..+..++++|+++|+++.+|.... ...++. .+..+++++.+++.. .+.++++++++++|
T Consensus       235 t~--g~g~d~v~d~~G~~~~~~~~~~~l~~~G~iv~~G~~~~~~~~~~~-~~~~~~~~i~g~~~~~~~~~~~~~~l~~~g  311 (345)
T 3jv7_A          235 TG--GQGATAVFDFVGAQSTIDTAQQVVAVDGHISVVGIHAGAHAKVGF-FMIPFGASVVTPYWGTRSELMEVVALARAG  311 (345)
T ss_dssp             HG--GGCEEEEEESSCCHHHHHHHHHHEEEEEEEEECSCCTTCCEEEST-TTSCTTCEEECCCSCCHHHHHHHHHHHHTT
T ss_pred             hC--CCCCeEEEECCCCHHHHHHHHHHHhcCCEEEEECCCCCCCCCcCH-HHHhCCCEEEEEecCCHHHHHHHHHHHHcC
Confidence            53  66999999999998789999999999999999987654 444553 677899999998766 56899999999999


Q ss_pred             CCCCCCceEEEecCChhhHHHHHHHHhcCCCceEEEEeC
Q 017868          327 KIDVKPLVTHRFGFSQKEVEEAFETSARGGTAIKVMFNL  365 (365)
Q Consensus       327 ~~~~~~~~~~~~~~~~~~~~~a~~~~~~~~~~gk~vi~~  365 (365)
                      .+.  + ++++|++  +++.+|++.+.+++..||+||++
T Consensus       312 ~l~--~-~~~~~~l--~~~~~A~~~~~~~~~~Gkvvv~p  345 (345)
T 3jv7_A          312 RLD--I-HTETFTL--DEGPAAYRRLREGSIRGRGVVVP  345 (345)
T ss_dssp             CCC--C-CEEEECS--TTHHHHHHHHHHTCCSSEEEECC
T ss_pred             CCc--e-EEEEEcH--HHHHHHHHHHHcCCCceeEEeCC
Confidence            994  4 4588999  99999999999999999999974

>2jhf_A Alcohol dehydrogenase E chain; oxidoreductase, metal coordination, NAD, zinc, inhibition, acetylation, metal-binding; HET: NAD; 1.0A {Equus caballus} SCOP: b.35.1.2 c.2.1.1 PDB: 1adc_A* 1adf_A* 1adg_A* 1adb_A* 1bto_A* 1heu_A* 1hf3_A* 1hld_A* 1lde_A* 1ldy_A* 1mg0_A* 1n92_A* 1p1r_A* 1ye3_A 1het_A* 2jhg_A* 2ohx_A* 2oxi_A* 3bto_A* 4dwv_A* ...

Probab=100.00  E-value=2.7e-55  Score=406.00  Aligned_cols=339  Identities=26%  Similarity=0.392  Sum_probs=291.5

Q ss_pred             hhcceeEEEecCC-ceEEEEecCCCCCCCcEEEEEeeeeeCcccHhhhhccccCCccCCCCcccCccceEEEEEeCCCCC
Q 017868           15 EEVNMAAWLLGVN-TLKIQPFELPSLGPYDVLVRMKAVGICGSDVHYLKTLRCADFVVKEPMVIGHECAGVIEKVGSEVK   93 (365)
Q Consensus        15 ~~~~~~~~~~~~~-~l~~~~~~~p~~~~~eVlI~v~~~~l~~~D~~~~~g~~~~~~~~~~p~~~G~e~~G~V~~vG~~v~   93 (365)
                      +++||++++.+++ +++++++|.|+|+++||+|||.+++||++|++.+.|...    ..+|.++|||++|+|+++|++|+
T Consensus         6 ~~~mkA~~~~~~g~~l~~~~~~~p~~~~~eVlVkv~a~gi~~~D~~~~~g~~~----~~~P~v~GhE~~G~V~~vG~~v~   81 (374)
T 2jhf_A            6 VIKCKAAVLWEEKKPFSIEEVEVAPPKAHEVRIKMVATGICRSDDHVVSGTLV----TPLPVIAGHEAAGIVESIGEGVT   81 (374)
T ss_dssp             CEEEEEEEBCSTTSCCEEEEEEECCCCTTEEEEEEEEEECCHHHHHHHHTSSC----CCSSBCCCCSEEEEEEEECTTCC
T ss_pred             ceeEEEEEEecCCCceEEEEccCCCCCCCeEEEEEeEEeechhhHHHHcCCCC----CCCCcccCcCceEEEEEECCCCC
Confidence            4568999998875 699999999999999999999999999999999887432    23799999999999999999999


Q ss_pred             CCCCCCEEEEcCCcCCCCCccccCCCCCCCCCcccc---ccC-----------------CCCcceeeEEeecCCceEECC
Q 017868           94 TLVPGDRVALEPGISCWRCDHCKGGRYNLCPEMKFF---ATP-----------------PVHGSLANQVVHPADLCFKLP  153 (365)
Q Consensus        94 ~~~~Gd~V~~~~~~~~~~~~~~~~~~~~~~~~~~~~---~~~-----------------~~~g~~~~~~~v~~~~~~~iP  153 (365)
                      +|++||||++.+..+|++|++|+.+++++|++....   +..                 ...|+|+||+++++++++++|
T Consensus        82 ~~~vGdrV~~~~~~~Cg~C~~C~~g~~~~C~~~~~~~~~g~~~~g~~~~~~~g~~~~~~~~~G~~aey~~v~~~~~~~iP  161 (374)
T 2jhf_A           82 TVRPGDKVIPLFTPQCGKCRVCKHPEGNFCLKNDLSMPRGTMQDGTSRFTCRGKPIHHFLGTSTFSQYTVVDEISVAKID  161 (374)
T ss_dssp             SCCTTCEEEECSSCCCSCSHHHHSTTCCCCTTCSSSSCCCSCTTSCCSEEETTEEEBCSTTTCCSBSEEEEEGGGEEECC
T ss_pred             CCCCCCEEEECCCCCCCCCccccCCCcCcCCCCccccccccccCCcccccccccccccccCCccCeeEEEEchHHeEECC
Confidence            999999999999999999999999999999976432   110                 125999999999999999999


Q ss_pred             CCCCcchhccch-hhHHHHHHH-HhcCCCCCCEEEEEcCCHHHHHHHHHHHHHCCCCeEEEEeCChhHHHHHHHcCCCEE
Q 017868          154 DNVSLEEGAMCE-PLSVGLHAC-RRANIGPETNVLIMGAGPIGLVTMLGAPRAFGAPRIVIVDVDDYRLSVAKEIGADNI  231 (365)
Q Consensus       154 ~~~~~~~a~~~~-~~~~a~~~~-~~~~~~~g~~vlI~G~g~~G~~ai~~l~~~~g~~~vi~v~~~~~~~~~~~~~g~~~~  231 (365)
                      +++++++|+.++ ++.|||+++ +.+++++|++|||+|+|++|++++| +++.+|+++|+++++++++.++++++|++.+
T Consensus       162 ~~l~~~~aa~l~~~~~ta~~~l~~~~~~~~g~~VlV~GaG~vG~~a~q-la~~~Ga~~Vi~~~~~~~~~~~~~~lGa~~v  240 (374)
T 2jhf_A          162 AASPLEKVCLIGCGFSTGYGSAVKVAKVTQGSTCAVFGLGGVGLSVIM-GCKAAGAARIIGVDINKDKFAKAKEVGATEC  240 (374)
T ss_dssp             TTCCHHHHGGGGTHHHHHHHHHHTTTCCCTTCEEEEECCSHHHHHHHH-HHHHTTCSEEEEECSCGGGHHHHHHTTCSEE
T ss_pred             CCCCHHHhhhhccHHHHHHHHHHhccCCCCCCEEEEECCCHHHHHHHH-HHHHcCCCeEEEEcCCHHHHHHHHHhCCceE
Confidence            999999999987 788999987 5689999999999999999999999 9999999779999999999999999999998


Q ss_pred             EeCCCCcccHHHHHHHHHHHhCCCceEEEeCCCCHHHHHHHHHhcccC-CEEEEEccCCC--CccccchHhhhcCcEEEe
Q 017868          232 VKVSTNLQDIAEEVEKIQKAMGTGIDVSFDCAGLNKTMSTALGATCAG-GKVCLVGMGHH--EMTVPLTPAAVREVDVVG  308 (365)
Q Consensus       232 ~~~~~~~~~~~~~i~~~~~~~~~~~d~vid~~g~~~~~~~~~~~l~~~-G~~~~~g~~~~--~~~~~~~~~~~~~~~i~~  308 (365)
                      +++.+..+++.+.+++.+   ++++|+|||++|....+..++++++++ |+++.+|....  ...++...+..+. ++.+
T Consensus       241 i~~~~~~~~~~~~~~~~~---~~g~D~vid~~g~~~~~~~~~~~l~~~~G~iv~~G~~~~~~~~~~~~~~~~~~~-~i~g  316 (374)
T 2jhf_A          241 VNPQDYKKPIQEVLTEMS---NGGVDFSFEVIGRLDTMVTALSCCQEAYGVSVIVGVPPDSQNLSMNPMLLLSGR-TWKG  316 (374)
T ss_dssp             ECGGGCSSCHHHHHHHHT---TSCBSEEEECSCCHHHHHHHHHHBCTTTCEEEECSCCCTTCCEEECTHHHHTTC-EEEE
T ss_pred             ecccccchhHHHHHHHHh---CCCCcEEEECCCCHHHHHHHHHHhhcCCcEEEEeccCCCCCccccCHHHHhcCC-eEEE
Confidence            876532356777776653   348999999999877889999999999 99999986543  2344555566777 9998


Q ss_pred             eccc----CCcHHHHHHHHHcCCCCCCCceEEEecCChhhHHHHHHHHhcCCCceEEEEeC
Q 017868          309 VFRY----KNTWPLCLELLRSGKIDVKPLVTHRFGFSQKEVEEAFETSARGGTAIKVMFNL  365 (365)
Q Consensus       309 ~~~~----~~~~~~~~~~l~~g~~~~~~~~~~~~~~~~~~~~~a~~~~~~~~~~gk~vi~~  365 (365)
                      ++..    .+.++++++++++|++.+.+.++++|+|  +++.+|++.+++++ .+|+||++
T Consensus       317 ~~~~~~~~~~~~~~~~~l~~~g~i~~~~~i~~~~~l--~~~~~A~~~~~~~~-~~Kvvi~~  374 (374)
T 2jhf_A          317 AIFGGFKSKDSVPKLVADFMAKKFALDPLITHVLPF--EKINEGFDLLRSGE-SIRTILTF  374 (374)
T ss_dssp             CSGGGCCHHHHHHHHHHHHHTTSSCCGGGEEEEEEG--GGHHHHHHHHHTTC-CSEEEEEC
T ss_pred             eccCCCChHHHHHHHHHHHHcCCCCchhheEEEEeH--HHHHHHHHHHHCCC-cceEEEeC
Confidence            7643    3578999999999999777788999999  99999999998876 47999875

>3fpc_A NADP-dependent alcohol dehydrogenase; oxydoreductase, bacterial alcohol dehydrogenase, domain exchange, chimera, metal-binding; 1.40A {Thermoanaerobacter brockii} PDB: 2nvb_A* 1ykf_A* 1bxz_A* 3ftn_A 3fsr_A 1y9a_A* 2oui_A* 3fpl_A* 1jqb_A 1kev_A* 1ped_A 2b83_A

Probab=100.00  E-value=6.6e-56  Score=406.82  Aligned_cols=337  Identities=26%  Similarity=0.363  Sum_probs=292.0

Q ss_pred             ceeEEEecCCceEEEEecCCCCCCCcEEEEEeeeeeCcccHh-hhhccccCCccCCCCcccCccceEEEEEeCCCCCCCC
Q 017868           18 NMAAWLLGVNTLKIQPFELPSLGPYDVLVRMKAVGICGSDVH-YLKTLRCADFVVKEPMVIGHECAGVIEKVGSEVKTLV   96 (365)
Q Consensus        18 ~~~~~~~~~~~l~~~~~~~p~~~~~eVlI~v~~~~l~~~D~~-~~~g~~~~~~~~~~p~~~G~e~~G~V~~vG~~v~~~~   96 (365)
                      |||+++.+++.+++.++|.|+|+++||+|||.++++|++|++ +..|..    ...+|.++|||++|+|+++|++|++|+
T Consensus         1 MkA~~~~~~~~~~~~e~~~P~~~~~eVlVkv~a~gi~~~D~~~~~~g~~----~~~~p~v~G~E~~G~V~~vG~~v~~~~   76 (352)
T 3fpc_A            1 MKGFAMLSIGKVGWIEKEKPAPGPFDAIVRPLAVAPCTSDIHTVFEGAI----GERHNMILGHEAVGEVVEVGSEVKDFK   76 (352)
T ss_dssp             CEEEEEEETTEEEEEECCCCCCCTTCEEEEEEEEECCHHHHHHHHSCTT----CCCSSEECCCEEEEEEEEECTTCCSCC
T ss_pred             CeEEEEccCCCceEEeCCCCCCCCCeEEEEeCEEeEcccchHHHhCCCC----CCCCCcccCCcceEEEEEECCCCCcCC
Confidence            789999999999999999999999999999999999999999 446543    246799999999999999999999999


Q ss_pred             CCCEEEEcCCcCCCCCccccCCCCCCCCCcccc--ccCCCCcceeeEEeecCC--ceEECCCCCCcchhccch-hhHHHH
Q 017868           97 PGDRVALEPGISCWRCDHCKGGRYNLCPEMKFF--ATPPVHGSLANQVVHPAD--LCFKLPDNVSLEEGAMCE-PLSVGL  171 (365)
Q Consensus        97 ~Gd~V~~~~~~~~~~~~~~~~~~~~~~~~~~~~--~~~~~~g~~~~~~~v~~~--~~~~iP~~~~~~~a~~~~-~~~~a~  171 (365)
                      +||||++.+..+|+.|.+|+.++.+.|......  .....+|+|+||+.+++.  +++++|+++++++|+.++ ++.|||
T Consensus        77 vGdrV~~~~~~~c~~c~~c~~g~~~~~~~~~~~~~~~~~~~G~~aey~~v~~~~~~~~~iP~~~~~~~aa~~~~~~~ta~  156 (352)
T 3fpc_A           77 PGDRVVVPAITPDWRTSEVQRGYHQHSGGMLAGWKFSNVKDGVFGEFFHVNDADMNLAHLPKEIPLEAAVMIPDMMTTGF  156 (352)
T ss_dssp             TTCEEEECSBCCCSSSHHHHTTCGGGTTSTTTTBCBTTTBCCSSBSCEEESSHHHHCEECCTTSCHHHHTTTTTHHHHHH
T ss_pred             CCCEEEEccccCCCCchhhcCCCcCCccccccccccccCCCCcccceEEeccccCeEEECCCCCCHHHHhhccchhHHHH
Confidence            999999999999999999999999888754321  112357999999999976  999999999999999885 889999


Q ss_pred             HHHHhcCCCCCCEEEEEcCCHHHHHHHHHHHHHCCCCeEEEEeCChhHHHHHHHcCCCEEEeCCCCcccHHHHHHHHHHH
Q 017868          172 HACRRANIGPETNVLIMGAGPIGLVTMLGAPRAFGAPRIVIVDVDDYRLSVAKEIGADNIVKVSTNLQDIAEEVEKIQKA  251 (365)
Q Consensus       172 ~~~~~~~~~~g~~vlI~G~g~~G~~ai~~l~~~~g~~~vi~v~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~i~~~~~~  251 (365)
                      ++++.+++++|++|||+|+|++|++++| +++..|+++|++++++++|.++++++|++.++++.  .+++.+.+++.+. 
T Consensus       157 ~al~~~~~~~g~~VlV~GaG~vG~~a~q-la~~~Ga~~Vi~~~~~~~~~~~~~~lGa~~vi~~~--~~~~~~~v~~~t~-  232 (352)
T 3fpc_A          157 HGAELANIKLGDTVCVIGIGPVGLMSVA-GANHLGAGRIFAVGSRKHCCDIALEYGATDIINYK--NGDIVEQILKATD-  232 (352)
T ss_dssp             HHHHHTTCCTTCCEEEECCSHHHHHHHH-HHHTTTCSSEEEECCCHHHHHHHHHHTCCEEECGG--GSCHHHHHHHHTT-
T ss_pred             HHHHhcCCCCCCEEEEECCCHHHHHHHH-HHHHcCCcEEEEECCCHHHHHHHHHhCCceEEcCC--CcCHHHHHHHHcC-
Confidence            9999999999999999999999999999 99999997799999999999999999999988764  3678888877643 


Q ss_pred             hCCCceEEEeCCCCHHHHHHHHHhcccCCEEEEEccCCCCccccchH----hhhcCcEEEeeccc--CCcHHHHHHHHHc
Q 017868          252 MGTGIDVSFDCAGLNKTMSTALGATCAGGKVCLVGMGHHEMTVPLTP----AAVREVDVVGVFRY--KNTWPLCLELLRS  325 (365)
Q Consensus       252 ~~~~~d~vid~~g~~~~~~~~~~~l~~~G~~~~~g~~~~~~~~~~~~----~~~~~~~i~~~~~~--~~~~~~~~~~l~~  325 (365)
                       +.++|+|||++|.+..+..++++|+++|+++.+|.......++...    ...+.+++.+.+..  ...++++++++++
T Consensus       233 -g~g~D~v~d~~g~~~~~~~~~~~l~~~G~~v~~G~~~~~~~~~~~~~~~~~~~~~~~i~g~~~~~~~~~~~~~~~l~~~  311 (352)
T 3fpc_A          233 -GKGVDKVVIAGGDVHTFAQAVKMIKPGSDIGNVNYLGEGDNIDIPRSEWGVGMGHKHIHGGLCPGGRLRMERLIDLVFY  311 (352)
T ss_dssp             -TCCEEEEEECSSCTTHHHHHHHHEEEEEEEEECCCCCSCSEEEEETTTTGGGTBCEEEEEBCCCCHHHHHHHHHHHHHT
T ss_pred             -CCCCCEEEECCCChHHHHHHHHHHhcCCEEEEecccCCCCceecchhHhhhhccccEEEEeeccCchhHHHHHHHHHHc
Confidence             6689999999998778999999999999999998654332222222    34578899988754  5678999999999


Q ss_pred             CCCCCCCceEEEec-CChhhHHHHHHHHhcCCC-ceEEEEeC
Q 017868          326 GKIDVKPLVTHRFG-FSQKEVEEAFETSARGGT-AIKVMFNL  365 (365)
Q Consensus       326 g~~~~~~~~~~~~~-~~~~~~~~a~~~~~~~~~-~gk~vi~~  365 (365)
                      |++.+.++++++|+ |  +++.+|++.+++++. .+|+||++
T Consensus       312 g~i~~~~~i~~~~~gl--~~~~~A~~~~~~~~~~~~Kvvi~~  351 (352)
T 3fpc_A          312 KRVDPSKLVTHVFRGF--DNIEKAFMLMKDKPKDLIKPVVIL  351 (352)
T ss_dssp             TSCCGGGGEEEEEEST--THHHHHHHHHHSCCTTCSEEEEEC
T ss_pred             CCCChhHhheeeCCCH--HHHHHHHHHHHhCCCCcEEEEEEe
Confidence            99987778999999 9  999999999988644 48999975

>2fzw_A Alcohol dehydrogenase class III CHI chain; S-nitrosoglutathione reductase, glutathione-dependent formaldehyde dehydrogenase, oxidoreductase; HET: NAD; 1.84A {Homo sapiens} SCOP: b.35.1.2 c.2.1.1 PDB: 3qj5_A* 1mc5_A* 2fze_A* 1m6w_A* 1ma0_A* 1mp0_A* 1teh_A* 1m6h_A*

Probab=100.00  E-value=2.1e-55  Score=406.77  Aligned_cols=341  Identities=25%  Similarity=0.361  Sum_probs=292.2

Q ss_pred             chhcceeEEEecCC-ceEEEEecCCCCCCCcEEEEEeeeeeCcccHhhhhccccCCccCCCCcccCccceEEEEEeCCCC
Q 017868           14 GEEVNMAAWLLGVN-TLKIQPFELPSLGPYDVLVRMKAVGICGSDVHYLKTLRCADFVVKEPMVIGHECAGVIEKVGSEV   92 (365)
Q Consensus        14 ~~~~~~~~~~~~~~-~l~~~~~~~p~~~~~eVlI~v~~~~l~~~D~~~~~g~~~~~~~~~~p~~~G~e~~G~V~~vG~~v   92 (365)
                      .+++||++++.+++ +++++++|.|+|+++||+|||.+++||++|++.+.|...   ...+|.++|||++|+|+++|++|
T Consensus         3 ~p~~mkA~~~~~~~~~l~~~~~~~p~~~~~eVlVkv~a~gi~~~D~~~~~g~~~---~~~~P~v~GhE~~G~V~~vG~~V   79 (373)
T 2fzw_A            3 EVIKCKAAVAWEAGKPLSIEEIEVAPPKAHEVRIKIIATAVCHTDAYTLSGADP---EGCFPVILGHLGAGIVESVGEGV   79 (373)
T ss_dssp             CCEEEEEEEBCSTTSCCEEEEEEECCCCTTEEEEEEEEEECCHHHHHHHHTCCT---TCCSSBCCCCEEEEEEEEECTTC
T ss_pred             CccceEEEEEecCCCCcEEEEeeCCCCCCCEEEEEEEEEEEchhhHHHhcCCCC---CCCCCccccccccEEEEEECCCC
Confidence            35679999999875 699999999999999999999999999999999887432   13579999999999999999999


Q ss_pred             CCCCCCCEEEEcCCcCCCCCccccCCCCCCCCCcccc---cc-----------------CCCCcceeeEEeecCCceEEC
Q 017868           93 KTLVPGDRVALEPGISCWRCDHCKGGRYNLCPEMKFF---AT-----------------PPVHGSLANQVVHPADLCFKL  152 (365)
Q Consensus        93 ~~~~~Gd~V~~~~~~~~~~~~~~~~~~~~~~~~~~~~---~~-----------------~~~~g~~~~~~~v~~~~~~~i  152 (365)
                      ++|++||||++.+..+|++|.+|+.+++++|++....   +.                 ....|+|+||+++++++++++
T Consensus        80 ~~~~vGdrV~~~~~~~Cg~C~~C~~g~~~~C~~~~~~~~~g~~~~g~~~~~~~g~~~~~~~~~G~~aey~~v~~~~~~~i  159 (373)
T 2fzw_A           80 TKLKAGDTVIPLYIPQCGECKFCLNPKTNLCQKIRVTQGKGLMPDGTSRFTCKGKTILHYMGTSTFSEYTVVADISVAKI  159 (373)
T ss_dssp             CSCCTTCEEEECSSCCCSCSHHHHCTTCCCCCTTHHHHHTTCCTTSCCSEEETTEEEBCCTTTCCSBSEEEEEGGGEEEC
T ss_pred             CCCCCCCEEEECCCCCCCCChHHcCcCcccCCCcccccccccccCCcccccccccccccccCCccceeEEEEchhheEEC
Confidence            9999999999999999999999999999999875321   11                 013599999999999999999


Q ss_pred             CCCCCcchhccch-hhHHHHHHH-HhcCCCCCCEEEEEcCCHHHHHHHHHHHHHCCCCeEEEEeCChhHHHHHHHcCCCE
Q 017868          153 PDNVSLEEGAMCE-PLSVGLHAC-RRANIGPETNVLIMGAGPIGLVTMLGAPRAFGAPRIVIVDVDDYRLSVAKEIGADN  230 (365)
Q Consensus       153 P~~~~~~~a~~~~-~~~~a~~~~-~~~~~~~g~~vlI~G~g~~G~~ai~~l~~~~g~~~vi~v~~~~~~~~~~~~~g~~~  230 (365)
                      |+++++++|+.++ ++.|||+++ +.+++++|++|||+|+|++|++++| +++.+|+++|+++++++++.++++++|++.
T Consensus       160 P~~l~~~~aa~l~~~~~ta~~~l~~~~~~~~g~~VlV~GaG~vG~~avq-la~~~Ga~~Vi~~~~~~~~~~~~~~lGa~~  238 (373)
T 2fzw_A          160 DPLAPLDKVCLLGCGISTGYGAAVNTAKLEPGSVCAVFGLGGVGLAVIM-GCKVAGASRIIGVDINKDKFARAKEFGATE  238 (373)
T ss_dssp             CTTSCHHHHGGGGTHHHHHHHHHHTTTCCCTTCEEEEECCSHHHHHHHH-HHHHHTCSEEEEECSCGGGHHHHHHHTCSE
T ss_pred             CCCCCHHHHhhhccHHHHHHHHHHhhcCCCCCCEEEEECCCHHHHHHHH-HHHHcCCCeEEEEcCCHHHHHHHHHcCCce
Confidence            9999999999987 788999987 5689999999999999999999999 999999977999999999999999999999


Q ss_pred             EEeCCCCcccHHHHHHHHHHHhCCCceEEEeCCCCHHHHHHHHHhcccC-CEEEEEccCCC--CccccchHhhhcCcEEE
Q 017868          231 IVKVSTNLQDIAEEVEKIQKAMGTGIDVSFDCAGLNKTMSTALGATCAG-GKVCLVGMGHH--EMTVPLTPAAVREVDVV  307 (365)
Q Consensus       231 ~~~~~~~~~~~~~~i~~~~~~~~~~~d~vid~~g~~~~~~~~~~~l~~~-G~~~~~g~~~~--~~~~~~~~~~~~~~~i~  307 (365)
                      ++++.+..+++.+.+++.+   ++++|+|||++|....+..++++++++ |+++.+|....  ...++...+..++ ++.
T Consensus       239 vi~~~~~~~~~~~~v~~~~---~~g~D~vid~~g~~~~~~~~~~~l~~~~G~iv~~G~~~~~~~~~~~~~~~~~~~-~i~  314 (373)
T 2fzw_A          239 CINPQDFSKPIQEVLIEMT---DGGVDYSFECIGNVKVMRAALEACHKGWGVSVVVGVAASGEEIATRPFQLVTGR-TWK  314 (373)
T ss_dssp             EECGGGCSSCHHHHHHHHT---TSCBSEEEECSCCHHHHHHHHHTBCTTTCEEEECSCCCTTCCEEECTHHHHTTC-EEE
T ss_pred             EeccccccccHHHHHHHHh---CCCCCEEEECCCcHHHHHHHHHhhccCCcEEEEEecCCCCceeeeCHHHHhcCC-EEE
Confidence            8876432356777777654   348999999999877889999999999 99999986543  2344455566677 999


Q ss_pred             eeccc----CCcHHHHHHHHHcCCCCCCCceEEEecCChhhHHHHHHHHhcCCCceEEEEeC
Q 017868          308 GVFRY----KNTWPLCLELLRSGKIDVKPLVTHRFGFSQKEVEEAFETSARGGTAIKVMFNL  365 (365)
Q Consensus       308 ~~~~~----~~~~~~~~~~l~~g~~~~~~~~~~~~~~~~~~~~~a~~~~~~~~~~gk~vi~~  365 (365)
                      ++...    .+.++++++++++|++.+.++++++|+|  +++.+|++.+++++. +|+||++
T Consensus       315 g~~~~~~~~~~~~~~~~~l~~~g~l~~~~~i~~~~~l--~~~~~A~~~~~~~~~-~kvvi~~  373 (373)
T 2fzw_A          315 GTAFGGWKSVESVPKLVSEYMSKKIKVDEFVTHNLSF--DEINKAFELMHSGKS-IRTVVKI  373 (373)
T ss_dssp             ECSGGGCCHHHHHHHHHHHHHTTSSCSGGGEEEEEEG--GGHHHHHHHHHHTCC-SEEEEEC
T ss_pred             EeccCCCCcHHHHHHHHHHHHcCCCCchheEeEEeeH--HHHHHHHHHHhCCCc-ceEEEeC
Confidence            87543    3578999999999999777888999999  999999999988765 7999875

>1vj0_A Alcohol dehydrogenase, zinc-containing; TM0436, structural G JCSG, PSI, protein structure initiative, joint center for S genomics; 2.00A {Thermotoga maritima} SCOP: b.35.1.2 c.2.1.1

Probab=100.00  E-value=9.1e-56  Score=409.50  Aligned_cols=341  Identities=24%  Similarity=0.411  Sum_probs=296.8

Q ss_pred             cchhcceeEEEecCC-ceEEEEecCCCCCCCcEEEEEeeeeeCcccHhhhhccccCCccCCCCcccCccceEEEEEeCCC
Q 017868           13 DGEEVNMAAWLLGVN-TLKIQPFELPSLGPYDVLVRMKAVGICGSDVHYLKTLRCADFVVKEPMVIGHECAGVIEKVGSE   91 (365)
Q Consensus        13 ~~~~~~~~~~~~~~~-~l~~~~~~~p~~~~~eVlI~v~~~~l~~~D~~~~~g~~~~~~~~~~p~~~G~e~~G~V~~vG~~   91 (365)
                      +|.-+||++++.+++ .++++++|.|+|+++||+|||.+++||++|++.+.|.+.   ...+|.++|||++|+|+++| +
T Consensus        13 ~~~~~mka~~~~~~g~~l~~~~~~~P~~~~~eVlVkv~a~gi~~~D~~~~~G~~~---~~~~P~v~GhE~~G~V~~vG-~   88 (380)
T 1vj0_A           13 MMGLKAHAMVLEKFNQPLVYKEFEISDIPRGSILVEILSAGVCGSDVHMFRGEDP---RVPLPIILGHEGAGRVVEVN-G   88 (380)
T ss_dssp             -CCEEEEEEEBCSTTSCCEEEEEEECCCCTTCEEEEEEEEEECHHHHHHHTTCCT---TCCSSBCCCCEEEEEEEEES-S
T ss_pred             HhhhheEEEEEecCCCCeEEEEccCCCCCCCEEEEEEeEEeecccchHHhcCCCC---CCCCCcccCcCcEEEEEEeC-C
Confidence            456779999999887 999999999999999999999999999999999887432   13578999999999999999 9


Q ss_pred             CC------CCCCCCEEEEcCCcCCCCCcccc-CCCCCCCCCccccccC-------CCCcceeeEEee-cCCceEECCCCC
Q 017868           92 VK------TLVPGDRVALEPGISCWRCDHCK-GGRYNLCPEMKFFATP-------PVHGSLANQVVH-PADLCFKLPDNV  156 (365)
Q Consensus        92 v~------~~~~Gd~V~~~~~~~~~~~~~~~-~~~~~~~~~~~~~~~~-------~~~g~~~~~~~v-~~~~~~~iP~~~  156 (365)
                      |+      +|++||||++.+..+|++|++|+ .+++++|++..+.+..       ...|+|+||+++ ++++++++|+++
T Consensus        89 V~~~~~~~~~~vGdrV~~~~~~~cg~C~~C~~~g~~~~C~~~~~~g~~~~~~~~~~~~G~~aey~~v~~~~~~~~iP~~l  168 (380)
T 1vj0_A           89 EKRDLNGELLKPGDLIVWNRGITCGECYWCKVSKEPYLCPNRKVYGINRGCSEYPHLRGCYSSHIVLDPETDVLKVSEKD  168 (380)
T ss_dssp             CCBCTTSCBCCTTCEEEECSEECCSSSHHHHTSCCGGGCTTCEETTTTCCSSSTTCCCSSSBSEEEECTTCCEEEECTTS
T ss_pred             ccccccCCCCCCCCEEEEcccCCCCCCHHHhcCCCcccCCCcceeccccccCCCCCCCccccceEEEcccceEEECCCCC
Confidence            99      99999999999999999999999 9999999987666531       347999999999 999999999999


Q ss_pred             Ccc-hhccchhhHHHHHHHHhcC-CCCCCEEEEEcCCHHHHHHHHHHHHHCCCCeEEEEeCChhHHHHHHHcCCCEEEeC
Q 017868          157 SLE-EGAMCEPLSVGLHACRRAN-IGPETNVLIMGAGPIGLVTMLGAPRAFGAPRIVIVDVDDYRLSVAKEIGADNIVKV  234 (365)
Q Consensus       157 ~~~-~a~~~~~~~~a~~~~~~~~-~~~g~~vlI~G~g~~G~~ai~~l~~~~g~~~vi~v~~~~~~~~~~~~~g~~~~~~~  234 (365)
                      +++ +|++++++.|||++++.++ +++|++|||+|+|++|++++| +++.+|+.+|+++++++++.++++++|++.++++
T Consensus       169 ~~~~~Aa~~~~~~ta~~al~~~~~~~~g~~VlV~GaG~vG~~aiq-lak~~Ga~~Vi~~~~~~~~~~~~~~lGa~~vi~~  247 (380)
T 1vj0_A          169 DLDVLAMAMCSGATAYHAFDEYPESFAGKTVVIQGAGPLGLFGVV-IARSLGAENVIVIAGSPNRLKLAEEIGADLTLNR  247 (380)
T ss_dssp             CHHHHHHHTTHHHHHHHHHHTCSSCCBTCEEEEECCSHHHHHHHH-HHHHTTBSEEEEEESCHHHHHHHHHTTCSEEEET
T ss_pred             ChHHhHhhhcHHHHHHHHHHhcCCCCCCCEEEEECcCHHHHHHHH-HHHHcCCceEEEEcCCHHHHHHHHHcCCcEEEec
Confidence            999 8888889999999998888 999999999999999999999 9999995578999999999999999999998875


Q ss_pred             CC-CcccHHHHHHHHHHHhCCCceEEEeCCCCHHHHHHHHHhcccCCEEEEEccCC-C-CccccchH-hhhcCcEEEeec
Q 017868          235 ST-NLQDIAEEVEKIQKAMGTGIDVSFDCAGLNKTMSTALGATCAGGKVCLVGMGH-H-EMTVPLTP-AAVREVDVVGVF  310 (365)
Q Consensus       235 ~~-~~~~~~~~i~~~~~~~~~~~d~vid~~g~~~~~~~~~~~l~~~G~~~~~g~~~-~-~~~~~~~~-~~~~~~~i~~~~  310 (365)
                      .. ..+++.+.+++.+.  +.++|+|||++|.+..+..++++|+++|+++.+|... . ...++... ++.+++++.+++
T Consensus       248 ~~~~~~~~~~~v~~~~~--g~g~Dvvid~~g~~~~~~~~~~~l~~~G~iv~~G~~~~~~~~~~~~~~~~~~~~~~i~g~~  325 (380)
T 1vj0_A          248 RETSVEERRKAIMDITH--GRGADFILEATGDSRALLEGSELLRRGGFYSVAGVAVPQDPVPFKVYEWLVLKNATFKGIW  325 (380)
T ss_dssp             TTSCHHHHHHHHHHHTT--TSCEEEEEECSSCTTHHHHHHHHEEEEEEEEECCCCSCCCCEEECHHHHTTTTTCEEEECC
T ss_pred             cccCcchHHHHHHHHhC--CCCCcEEEECCCCHHHHHHHHHHHhcCCEEEEEecCCCCCCeeEchHHHHHhCCeEEEEee
Confidence            41 13566666665532  4589999999998668899999999999999998654 3 44555556 778999999987


Q ss_pred             cc-CCcHHHHHHHHHc--CCCCCCCceEEEecCChhhHHHHHHHHhcCCCceEEEEeC
Q 017868          311 RY-KNTWPLCLELLRS--GKIDVKPLVTHRFGFSQKEVEEAFETSARGGTAIKVMFNL  365 (365)
Q Consensus       311 ~~-~~~~~~~~~~l~~--g~~~~~~~~~~~~~~~~~~~~~a~~~~~~~~~~gk~vi~~  365 (365)
                      .. .+.++++++++++  |++  .+.++++|+|  +++.+|++.+++++.. |+||++
T Consensus       326 ~~~~~~~~~~~~l~~~~~g~l--~~~i~~~~~l--~~~~~A~~~~~~~~~~-Kvvl~~  378 (380)
T 1vj0_A          326 VSDTSHFVKTVSITSRNYQLL--SKLITHRLPL--KEANKALELMESREAL-KVILYP  378 (380)
T ss_dssp             CCCHHHHHHHHHHHHTCHHHH--GGGCCEEEEG--GGHHHHHHHHHHTSCS-CEEEEC
T ss_pred             cCCHHHHHHHHHHHHhhcCCe--eeEEEEEEeH--HHHHHHHHHHhcCCCc-eEEEEe
Confidence            65 5678999999999  988  7788899999  9999999999988778 999874

>4eez_A Alcohol dehydrogenase 1; site-saturation mutagenesis, directed evolution, isobutyraldehyde, biofuel, oxidoreductase; HET: PG4; 1.90A {Lactococcus lactis subsp} PDB: 4eex_A*

Probab=100.00  E-value=5.4e-55  Score=400.62  Aligned_cols=333  Identities=24%  Similarity=0.405  Sum_probs=295.1

Q ss_pred             ceeEEEec--CCceEEEEecCCCCCCCcEEEEEeeeeeCcccHhhhhccccCCccCCCCcccCccceEEEEEeCCCCCCC
Q 017868           18 NMAAWLLG--VNTLKIQPFELPSLGPYDVLVRMKAVGICGSDVHYLKTLRCADFVVKEPMVIGHECAGVIEKVGSEVKTL   95 (365)
Q Consensus        18 ~~~~~~~~--~~~l~~~~~~~p~~~~~eVlI~v~~~~l~~~D~~~~~g~~~~~~~~~~p~~~G~e~~G~V~~vG~~v~~~   95 (365)
                      |||+++..  ++.+++.++|+|+|+||||||||.++|||++|++.+.|.+    ...+|.++|||++|+|+++|++|++|
T Consensus         1 MKA~v~~~~~~~~~~l~e~~~P~~~p~eVLVkv~a~gic~~D~~~~~G~~----~~~~p~i~GhE~aG~V~~vG~~V~~~   76 (348)
T 4eez_A            1 MKAAVVRHNPDGYADLVEKELRAIKPNEALLDMEYCGVCHTDLHVAAGDF----GNKAGTVLGHEGIGIVKEIGADVSSL   76 (348)
T ss_dssp             CEEEEECSSCCSSEEEEECCCCCCCTTEEEEEEEEEECCHHHHHHHTTTT----CCCTTCBCCSEEEEEEEEECTTCCSC
T ss_pred             CeEEEEEcCCCCcEEEEEeECCCCCCCEEEEEEEEEEECHHHHHHhcCCC----CCCCCcccceeEEEEEEEECceeeec
Confidence            78888863  4679999999999999999999999999999999988753    35679999999999999999999999


Q ss_pred             CCCCEEEEcCCc-CCCCCccccCCCCCCCCCccccccCCCCcceeeEEeecCCceEECCCCCCcchhccch-hhHHHHHH
Q 017868           96 VPGDRVALEPGI-SCWRCDHCKGGRYNLCPEMKFFATPPVHGSLANQVVHPADLCFKLPDNVSLEEGAMCE-PLSVGLHA  173 (365)
Q Consensus        96 ~~Gd~V~~~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~v~~~~~~~iP~~~~~~~a~~~~-~~~~a~~~  173 (365)
                      ++||||++.+.. .|+.|.+|..+..+.|......+. ..+|+|+||+.+++++++++|+++++++|+.++ +..|||++
T Consensus        77 ~~GdrV~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~~-~~~G~~ae~~~~~~~~~~~iP~~~~~~~aa~l~~~~~ta~~~  155 (348)
T 4eez_A           77 QVGDRVSVAWFFEGCGHCEYCVSGNETFCREVKNAGY-SVDGGMAEEAIVVADYAVKVPDGLDPIEASSITCAGVTTYKA  155 (348)
T ss_dssp             CTTCEEEEESEEECCSSSHHHHTTCGGGCTTCEEBTT-TBCCSSBSEEEEEGGGSCBCCTTSCHHHHHHHHHHHHHHHHH
T ss_pred             ccCCeEeecccccccCccccccCCccccccccccccc-ccCCcceeeccccccceeecCCCCCHHHHhhcccceeeEEee
Confidence            999999876554 478899999999999998777665 468999999999999999999999999999886 78889999


Q ss_pred             HHhcCCCCCCEEEEEcCCHHHHHHHHHHHHHCCCCeEEEEeCChhHHHHHHHcCCCEEEeCCCCcccHHHHHHHHHHHhC
Q 017868          174 CRRANIGPETNVLIMGAGPIGLVTMLGAPRAFGAPRIVIVDVDDYRLSVAKEIGADNIVKVSTNLQDIAEEVEKIQKAMG  253 (365)
Q Consensus       174 ~~~~~~~~g~~vlI~G~g~~G~~ai~~l~~~~g~~~vi~v~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~i~~~~~~~~  253 (365)
                      ++.+++++|++|||+|+|++|.+++| +++..+..+|++++++++|.++++++|++.++++.+  +++.+.+++.+.  +
T Consensus       156 l~~~~~~~g~~VlV~GaG~~g~~a~~-~a~~~~g~~Vi~~~~~~~r~~~~~~~Ga~~~i~~~~--~~~~~~v~~~t~--g  230 (348)
T 4eez_A          156 IKVSGVKPGDWQVIFGAGGLGNLAIQ-YAKNVFGAKVIAVDINQDKLNLAKKIGADVTINSGD--VNPVDEIKKITG--G  230 (348)
T ss_dssp             HHHHTCCTTCEEEEECCSHHHHHHHH-HHHHTSCCEEEEEESCHHHHHHHHHTTCSEEEEC-C--CCHHHHHHHHTT--S
T ss_pred             ecccCCCCCCEEEEEcCCCccHHHHH-HHHHhCCCEEEEEECcHHHhhhhhhcCCeEEEeCCC--CCHHHHhhhhcC--C
Confidence            99889999999999999999999999 666655558999999999999999999999998654  678888887753  7


Q ss_pred             CCceEEEeCCCCHHHHHHHHHhcccCCEEEEEccCCCCccccchHhhhcCcEEEeeccc-CCcHHHHHHHHHcCCCCCCC
Q 017868          254 TGIDVSFDCAGLNKTMSTALGATCAGGKVCLVGMGHHEMTVPLTPAAVREVDVVGVFRY-KNTWPLCLELLRSGKIDVKP  332 (365)
Q Consensus       254 ~~~d~vid~~g~~~~~~~~~~~l~~~G~~~~~g~~~~~~~~~~~~~~~~~~~i~~~~~~-~~~~~~~~~~l~~g~~~~~~  332 (365)
                      .++|.++++++....+..++++++++|+++.+|.......++...+.++++++.+++.+ ..+++++++++++|++  ++
T Consensus       231 ~g~d~~~~~~~~~~~~~~~~~~l~~~G~~v~~g~~~~~~~~~~~~~~~~~~~i~gs~~~~~~~~~~~~~l~~~g~i--~p  308 (348)
T 4eez_A          231 LGVQSAIVCAVARIAFEQAVASLKPMGKMVAVAVPNTEMTLSVPTVVFDGVEVAGSLVGTRLDLAEAFQFGAEGKV--KP  308 (348)
T ss_dssp             SCEEEEEECCSCHHHHHHHHHTEEEEEEEEECCCCSCEEEECHHHHHHSCCEEEECCSCCHHHHHHHHHHHHTTSC--CC
T ss_pred             CCceEEEEeccCcchhheeheeecCCceEEEEeccCCCCccCHHHHHhCCeEEEEEecCCHHHHHHHHHHHHcCCC--EE
Confidence            79999999999998999999999999999999877666677778889999999998776 5679999999999999  55


Q ss_pred             ceEEEecCChhhHHHHHHHHhcCCCceEEEEeC
Q 017868          333 LVTHRFGFSQKEVEEAFETSARGGTAIKVMFNL  365 (365)
Q Consensus       333 ~~~~~~~~~~~~~~~a~~~~~~~~~~gk~vi~~  365 (365)
                      .+ ++|+|  +++++|++.+++++..||+||++
T Consensus       309 ~~-~~~~l--~~~~~A~~~l~~g~~~GKvVl~~  338 (348)
T 4eez_A          309 IV-ATRKL--EEINDIIDEMKAGKIEGRMVIDF  338 (348)
T ss_dssp             CE-EEECG--GGHHHHHHHHHTTCCSSEEEEEC
T ss_pred             EE-EEEeH--HHHHHHHHHHHCCCCccEEEEEc
Confidence            44 78888  99999999999999999999985

>1rjw_A ADH-HT, alcohol dehydrogenase; oxidoreductase, NAD, zinc, tetramer; 2.35A {Geobacillus stearothermophilus} SCOP: b.35.1.2 c.2.1.1 PDB: 3pii_A

Probab=100.00  E-value=3.4e-54  Score=393.28  Aligned_cols=332  Identities=29%  Similarity=0.446  Sum_probs=289.1

Q ss_pred             ceeEEEecCC-ceEEEEecCCCCCCCcEEEEEeeeeeCcccHhhhhccccCCccCCCCcccCccceEEEEEeCCCCCCCC
Q 017868           18 NMAAWLLGVN-TLKIQPFELPSLGPYDVLVRMKAVGICGSDVHYLKTLRCADFVVKEPMVIGHECAGVIEKVGSEVKTLV   96 (365)
Q Consensus        18 ~~~~~~~~~~-~l~~~~~~~p~~~~~eVlI~v~~~~l~~~D~~~~~g~~~~~~~~~~p~~~G~e~~G~V~~vG~~v~~~~   96 (365)
                      ||++++.+++ +++++++|.|+|+++||+|||.+++||++|++.+.|...  ....+|.++|||++|+|+++|++|++|+
T Consensus         1 Mka~~~~~~g~~l~~~~~~~P~~~~~eVlVkv~a~gi~~~D~~~~~g~~~--~~~~~p~v~GhE~~G~V~~vG~~v~~~~   78 (339)
T 1rjw_A            1 MKAAVVEQFKEPLKIKEVEKPTISYGEVLVRIKACGVCHTDLHAAHGDWP--VKPKLPLIPGHEGVGIVEEVGPGVTHLK   78 (339)
T ss_dssp             CEEEEBSSTTSCCEEEECCCCCCCTTEEEEEEEEEEECHHHHHHHHTCSS--SCCCSSBCCCSCEEEEEEEECTTCCSCC
T ss_pred             CeEEEEcCCCCCcEEEEeeCCCCCCCEEEEEEEEEeEchhhHHHhcCCCC--cCCCCCeeccccceEEEEEECCCCCcCC
Confidence            6788888776 799999999999999999999999999999998887532  1235799999999999999999999999


Q ss_pred             CCCEEEEcCCc-CCCCCccccCCCCCCCCCccccccCCCCcceeeEEeecCCceEECCCCCCcchhccch-hhHHHHHHH
Q 017868           97 PGDRVALEPGI-SCWRCDHCKGGRYNLCPEMKFFATPPVHGSLANQVVHPADLCFKLPDNVSLEEGAMCE-PLSVGLHAC  174 (365)
Q Consensus        97 ~Gd~V~~~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~v~~~~~~~iP~~~~~~~a~~~~-~~~~a~~~~  174 (365)
                      +||||++.+.. .|++|++|+.+++++|++....+. ..+|+|+||+++++++++++|+++++++|+.++ ++.|||+++
T Consensus        79 vGdrV~~~~~~~~cg~C~~C~~g~~~~C~~~~~~g~-~~~G~~aey~~v~~~~~~~~P~~~~~~~aa~l~~~~~ta~~~l  157 (339)
T 1rjw_A           79 VGDRVGIPWLYSACGHCDYCLSGQETLCEHQKNAGY-SVDGGYAEYCRAAADYVVKIPDNLSFEEAAPIFCAGVTTYKAL  157 (339)
T ss_dssp             TTCEEEECSEEECCSCSHHHHTTCGGGCTTCEEBTT-TBCCSSBSEEEEEGGGCEECCTTSCHHHHGGGGTHHHHHHHHH
T ss_pred             CCCEEEEecCCCCCCCCchhhCcCcccCCCcceeec-CCCCcceeeEEechHHEEECCCCCCHHHhhhhhhhHHHHHHHH
Confidence            99999986654 599999999999999998876664 467999999999999999999999999998876 778999999


Q ss_pred             HhcCCCCCCEEEEEcCCHHHHHHHHHHHHHCCCCeEEEEeCChhHHHHHHHcCCCEEEeCCCCcccHHHHHHHHHHHhCC
Q 017868          175 RRANIGPETNVLIMGAGPIGLVTMLGAPRAFGAPRIVIVDVDDYRLSVAKEIGADNIVKVSTNLQDIAEEVEKIQKAMGT  254 (365)
Q Consensus       175 ~~~~~~~g~~vlI~G~g~~G~~ai~~l~~~~g~~~vi~v~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~i~~~~~~~~~  254 (365)
                      +..++++|++|||+|+|++|++++| +++..|+ +|+++++++++.++++++|++.++++.+  +++.+.+++.+    +
T Consensus       158 ~~~~~~~g~~VlV~GaG~vG~~~~~-~a~~~Ga-~Vi~~~~~~~~~~~~~~lGa~~~~d~~~--~~~~~~~~~~~----~  229 (339)
T 1rjw_A          158 KVTGAKPGEWVAIYGIGGLGHVAVQ-YAKAMGL-NVVAVDIGDEKLELAKELGADLVVNPLK--EDAAKFMKEKV----G  229 (339)
T ss_dssp             HHHTCCTTCEEEEECCSTTHHHHHH-HHHHTTC-EEEEECSCHHHHHHHHHTTCSEEECTTT--SCHHHHHHHHH----S
T ss_pred             HhcCCCCCCEEEEECCCHHHHHHHH-HHHHcCC-EEEEEeCCHHHHHHHHHCCCCEEecCCC--ccHHHHHHHHh----C
Confidence            7778999999999999889999999 8899999 7899999999999999999998887643  56777776653    5


Q ss_pred             CceEEEeCCCCHHHHHHHHHhcccCCEEEEEccCCCCccccchHhhhcCcEEEeeccc-CCcHHHHHHHHHcCCCCCCCc
Q 017868          255 GIDVSFDCAGLNKTMSTALGATCAGGKVCLVGMGHHEMTVPLTPAAVREVDVVGVFRY-KNTWPLCLELLRSGKIDVKPL  333 (365)
Q Consensus       255 ~~d~vid~~g~~~~~~~~~~~l~~~G~~~~~g~~~~~~~~~~~~~~~~~~~i~~~~~~-~~~~~~~~~~l~~g~~~~~~~  333 (365)
                      ++|++||++|....+..++++++++|+++.+|.......++...+..+++++.+++.. .+.++++++++++|.+.  +.
T Consensus       230 ~~d~vid~~g~~~~~~~~~~~l~~~G~~v~~g~~~~~~~~~~~~~~~~~~~i~g~~~~~~~~~~~~~~l~~~g~l~--~~  307 (339)
T 1rjw_A          230 GVHAAVVTAVSKPAFQSAYNSIRRGGACVLVGLPPEEMPIPIFDTVLNGIKIIGSIVGTRKDLQEALQFAAEGKVK--TI  307 (339)
T ss_dssp             SEEEEEESSCCHHHHHHHHHHEEEEEEEEECCCCSSEEEEEHHHHHHTTCEEEECCSCCHHHHHHHHHHHHTTSCC--CC
T ss_pred             CCCEEEECCCCHHHHHHHHHHhhcCCEEEEecccCCCCccCHHHHHhCCcEEEEeccCCHHHHHHHHHHHHcCCCC--cc
Confidence            8999999999877889999999999999999876544455555677899999998765 46789999999999994  43


Q ss_pred             eEEEecCChhhHHHHHHHHhcCCCceEEEEeC
Q 017868          334 VTHRFGFSQKEVEEAFETSARGGTAIKVMFNL  365 (365)
Q Consensus       334 ~~~~~~~~~~~~~~a~~~~~~~~~~gk~vi~~  365 (365)
                       +++|+|  +++.+|++.+++++..||+|+++
T Consensus       308 -~~~~~l--~~~~~A~~~~~~~~~~gKvvi~~  336 (339)
T 1rjw_A          308 -IEVQPL--EKINEVFDRMLKGQINGRVVLTL  336 (339)
T ss_dssp             -EEEEEG--GGHHHHHHHHHTTCCSSEEEEEC
T ss_pred             -EEEEcH--HHHHHHHHHHHcCCCceEEEEec
Confidence             578998  99999999999988899999974

>3two_A Mannitol dehydrogenase; cinnamyl-alcohol dehydrogenase, NADP(H) oxidoreductase; HET: NDP; 2.18A {Helicobacter pylori}

Probab=100.00  E-value=7.1e-55  Score=399.35  Aligned_cols=325  Identities=20%  Similarity=0.286  Sum_probs=281.9

Q ss_pred             hcceeEEEecC-CceEEEEecCCCCCCCcEEEEEeeeeeCcccHhhhhccccCCccCCCCcccCccceEEEEEeCCCCCC
Q 017868           16 EVNMAAWLLGV-NTLKIQPFELPSLGPYDVLVRMKAVGICGSDVHYLKTLRCADFVVKEPMVIGHECAGVIEKVGSEVKT   94 (365)
Q Consensus        16 ~~~~~~~~~~~-~~l~~~~~~~p~~~~~eVlI~v~~~~l~~~D~~~~~g~~~~~~~~~~p~~~G~e~~G~V~~vG~~v~~   94 (365)
                      ++|+++++.++ ++++++++|.|+|+++||+|||.++++|++|++.+.|....   ..+|.++|||++|+|+++|++|++
T Consensus         3 m~mka~~~~~~~~~l~~~~~~~P~~~~~eVlVkv~a~gi~~~D~~~~~g~~~~---~~~p~i~G~E~~G~V~~vG~~v~~   79 (348)
T 3two_A            3 VQSKGFAIFSKDEHFKPHDFSRHAVGPRDVLIDILYAGICHSDIHSAYSEWKE---GIYPMIPGHEIAGIIKEVGKGVKK   79 (348)
T ss_dssp             EEEEEEEBCSTTSCCEEEEEEECCCCTTEEEEEEEEEEECHHHHHHHTTSSSC---CCSSBCCCCCEEEEEEEECTTCCS
T ss_pred             eEEEEEEEccCCCCCeEEEeeCCCCCCCeEEEEEEEeeecccchhhhcCCCCC---CCCCeecCcceeEEEEEECCCCCC
Confidence            57999999876 57999999999999999999999999999999999875422   467999999999999999999999


Q ss_pred             CCCCCEEEEcCC-cCCCCCccccCCCCCCCCCccccccC---------CCCcceeeEEeecCCceEECCCCCCcchhccc
Q 017868           95 LVPGDRVALEPG-ISCWRCDHCKGGRYNLCPEMKFFATP---------PVHGSLANQVVHPADLCFKLPDNVSLEEGAMC  164 (365)
Q Consensus        95 ~~~Gd~V~~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~---------~~~g~~~~~~~v~~~~~~~iP~~~~~~~a~~~  164 (365)
                      |++||||++.+. .+|++|++|+.+++++|. ....+..         ...|+|+||+++++++++++|+++++++|+.+
T Consensus        80 ~~vGdrV~~~~~~~~Cg~C~~C~~g~~~~c~-~~~~~~~~~~~~~~~~~~~G~~aey~~v~~~~~~~iP~~~~~~~aa~l  158 (348)
T 3two_A           80 FKIGDVVGVGCFVNSCKACKPCKEHQEQFCT-KVVFTYDCLDSFHDNEPHMGGYSNNIVVDENYVISVDKNAPLEKVAPL  158 (348)
T ss_dssp             CCTTCEEEECSEEECCSCSHHHHTTCGGGCT-TCEESSSSEEGGGTTEECCCSSBSEEEEEGGGCEECCTTSCHHHHGGG
T ss_pred             CCCCCEEEEeCCcCCCCCChhHhCCCcccCc-ccccccccccccccCCcCCccccceEEechhhEEECCCCCCHHHhhhh
Confidence            999999988654 689999999999999998 4333321         12499999999999999999999999999988


Q ss_pred             h-hhHHHHHHHHhcCCCCCCEEEEEcCCHHHHHHHHHHHHHCCCCeEEEEeCChhHHHHHHHcCCCEEEeCCCCcccHHH
Q 017868          165 E-PLSVGLHACRRANIGPETNVLIMGAGPIGLVTMLGAPRAFGAPRIVIVDVDDYRLSVAKEIGADNIVKVSTNLQDIAE  243 (365)
Q Consensus       165 ~-~~~~a~~~~~~~~~~~g~~vlI~G~g~~G~~ai~~l~~~~g~~~vi~v~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~  243 (365)
                      + .+.|||++++..++++|++|||+|+|++|++++| +++..|+ +|+++++++++.++++++|++.++ .  +.+.+  
T Consensus       159 ~~~~~ta~~~l~~~~~~~g~~VlV~GaG~vG~~a~q-la~~~Ga-~Vi~~~~~~~~~~~~~~lGa~~v~-~--~~~~~--  231 (348)
T 3two_A          159 LCAGITTYSPLKFSKVTKGTKVGVAGFGGLGSMAVK-YAVAMGA-EVSVFARNEHKKQDALSMGVKHFY-T--DPKQC--  231 (348)
T ss_dssp             GTHHHHHHHHHHHTTCCTTCEEEEESCSHHHHHHHH-HHHHTTC-EEEEECSSSTTHHHHHHTTCSEEE-S--SGGGC--
T ss_pred             hhhHHHHHHHHHhcCCCCCCEEEEECCcHHHHHHHH-HHHHCCC-eEEEEeCCHHHHHHHHhcCCCeec-C--CHHHH--
Confidence            6 7889999998889999999999999999999999 9999999 789999999999999999999887 2  11111  


Q ss_pred             HHHHHHHHhCCCceEEEeCCCCHHHHHHHHHhcccCCEEEEEccCC-CCcc-ccchHhh-hcCcEEEeeccc-CCcHHHH
Q 017868          244 EVEKIQKAMGTGIDVSFDCAGLNKTMSTALGATCAGGKVCLVGMGH-HEMT-VPLTPAA-VREVDVVGVFRY-KNTWPLC  319 (365)
Q Consensus       244 ~i~~~~~~~~~~~d~vid~~g~~~~~~~~~~~l~~~G~~~~~g~~~-~~~~-~~~~~~~-~~~~~i~~~~~~-~~~~~~~  319 (365)
                               ..++|+|||++|....+..++++|+++|+++.+|... .... ++...+. .+++++.+++.. .+.++++
T Consensus       232 ---------~~~~D~vid~~g~~~~~~~~~~~l~~~G~iv~~G~~~~~~~~~~~~~~~~~~~~~~i~g~~~~~~~~~~~~  302 (348)
T 3two_A          232 ---------KEELDFIISTIPTHYDLKDYLKLLTYNGDLALVGLPPVEVAPVLSVFDFIHLGNRKVYGSLIGGIKETQEM  302 (348)
T ss_dssp             ---------CSCEEEEEECCCSCCCHHHHHTTEEEEEEEEECCCCCGGGCCEEEHHHHHHTCSCEEEECCSCCHHHHHHH
T ss_pred             ---------hcCCCEEEECCCcHHHHHHHHHHHhcCCEEEEECCCCCCCcccCCHHHHHhhCCeEEEEEecCCHHHHHHH
Confidence                     2389999999998768899999999999999998765 4444 5555666 899999998766 4679999


Q ss_pred             HHHHHcCCCCCCCceEEEecCChhhHHHHHHHHhcCCCceEEEEeC
Q 017868          320 LELLRSGKIDVKPLVTHRFGFSQKEVEEAFETSARGGTAIKVMFNL  365 (365)
Q Consensus       320 ~~~l~~g~~~~~~~~~~~~~~~~~~~~~a~~~~~~~~~~gk~vi~~  365 (365)
                      ++++++|.+.  +. .++|++  +++++|++.+.+++..||+||++
T Consensus       303 ~~l~~~g~l~--~~-~~~~~l--~~~~~A~~~~~~~~~~gKvVi~~  343 (348)
T 3two_A          303 VDFSIKHNIY--PE-IDLILG--KDIDTAYHNLTHGKAKFRYVIDM  343 (348)
T ss_dssp             HHHHHHTTCC--CC-EEEECG--GGHHHHHHHHHTTCCCSEEEEEG
T ss_pred             HHHHHhCCCC--ce-EEEEEH--HHHHHHHHHHHcCCCceEEEEec
Confidence            9999999994  44 478888  99999999999999999999974

>2h6e_A ADH-4, D-arabinose 1-dehydrogenase; rossman fold, medium chain alcohol dehydrogenase, oxidoreduc; 1.80A {Sulfolobus solfataricus}

Probab=100.00  E-value=1.9e-54  Score=395.83  Aligned_cols=332  Identities=23%  Similarity=0.370  Sum_probs=267.1

Q ss_pred             hcceeEEEecCC-ceEEEEecCCCCCCCcEEEEEeeeeeCcccHhhhhccccCCccCCCCcccCccceEEEEEeCCCCCC
Q 017868           16 EVNMAAWLLGVN-TLKIQPFELPSLGPYDVLVRMKAVGICGSDVHYLKTLRCADFVVKEPMVIGHECAGVIEKVGSEVKT   94 (365)
Q Consensus        16 ~~~~~~~~~~~~-~l~~~~~~~p~~~~~eVlI~v~~~~l~~~D~~~~~g~~~~~~~~~~p~~~G~e~~G~V~~vG~~v~~   94 (365)
                      .+||++++.+++ ++++.++|.|+|+++||+|||.++++|++|++.+.|.... ....+|.++|||++|+|+++|++ ++
T Consensus         2 ~~mka~~~~~~g~~l~~~~~~~P~~~~~eVlVkv~a~gi~~~D~~~~~g~~~~-~~~~~p~i~G~E~~G~V~~vG~~-~~   79 (344)
T 2h6e_A            2 VKSKAALLKKFSEPLSIEDVNIPEPQGEEVLIRIGGAGVCRTDLRVWKGVEAK-QGFRLPIILGHENAGTIVEVGEL-AK   79 (344)
T ss_dssp             EEEEBCEECSCCC-----EEEECCCCTTCEEEEEEEEECCHHHHHHHTTSCCC-TTCCSSEECCCCEEEEEEEECTT-CC
T ss_pred             ceeEEEEEecCCCCCeEEEeeCCCCCCCEEEEEEEEEEechhhHHHHcCCCcc-cCCCCCccccccceEEEEEECCC-CC
Confidence            468999998874 7999999999999999999999999999999998875321 12357899999999999999999 99


Q ss_pred             CCCCCEEEEcCCcCCCCCccccCCCCCCCCCccccccCCCCcceeeEEeec-CCceEECCCCCCcchhccch-hhHHHHH
Q 017868           95 LVPGDRVALEPGISCWRCDHCKGGRYNLCPEMKFFATPPVHGSLANQVVHP-ADLCFKLPDNVSLEEGAMCE-PLSVGLH  172 (365)
Q Consensus        95 ~~~Gd~V~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~v~-~~~~~~iP~~~~~~~a~~~~-~~~~a~~  172 (365)
                      |++||||++.+..+|++|.+|+.+++++|++....|. ..+|+|+||++++ +++++++ +++++++|+.++ .+.|||+
T Consensus        80 ~~~GdrV~~~~~~~Cg~C~~C~~g~~~~C~~~~~~G~-~~~G~~aey~~v~~~~~~~~i-~~l~~~~aa~l~~~~~ta~~  157 (344)
T 2h6e_A           80 VKKGDNVVVYATWGDLTCRYCREGKFNICKNQIIPGQ-TTNGGFSEYMLVKSSRWLVKL-NSLSPVEAAPLADAGTTSMG  157 (344)
T ss_dssp             CCTTCEEEECSCBCCSCSTTGGGTCGGGCTTCBCBTT-TBCCSSBSEEEESCGGGEEEE-SSSCHHHHGGGGTHHHHHHH
T ss_pred             CCCCCEEEECCCCCCCCChhhhCCCcccCCCcccccc-ccCCcceeeEEecCcccEEEe-CCCCHHHhhhhhhhhHHHHH
Confidence            9999999999889999999999999999998766664 4579999999999 9999999 999999998776 7789999


Q ss_pred             HHHhc-----CCCCCCEEEEEcCCHHHHHHHHHHHHHC--CCCeEEEEeCChhHHHHHHHcCCCEEEeCCCCcccHHHHH
Q 017868          173 ACRRA-----NIGPETNVLIMGAGPIGLVTMLGAPRAF--GAPRIVIVDVDDYRLSVAKEIGADNIVKVSTNLQDIAEEV  245 (365)
Q Consensus       173 ~~~~~-----~~~~g~~vlI~G~g~~G~~ai~~l~~~~--g~~~vi~v~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~i  245 (365)
                      +++..     ++ +|++|||+|+|++|++++| +++.+  |+ +|+++++++++.++++++|++.++++... +   +.+
T Consensus       158 al~~~~~~~~~~-~g~~VlV~GaG~vG~~aiq-lak~~~~Ga-~Vi~~~~~~~~~~~~~~lGa~~vi~~~~~-~---~~~  230 (344)
T 2h6e_A          158 AIRQALPFISKF-AEPVVIVNGIGGLAVYTIQ-ILKALMKNI-TIVGISRSKKHRDFALELGADYVSEMKDA-E---SLI  230 (344)
T ss_dssp             HHHHHHHHHTTC-SSCEEEEECCSHHHHHHHH-HHHHHCTTC-EEEEECSCHHHHHHHHHHTCSEEECHHHH-H---HHH
T ss_pred             HHHhhhhcccCC-CCCEEEEECCCHHHHHHHH-HHHHhcCCC-EEEEEeCCHHHHHHHHHhCCCEEeccccc-h---HHH
Confidence            99766     89 9999999999999999999 89999  99 58999999999999999999998764310 1   223


Q ss_pred             HHHHHHhCCCceEEEeCCCCHHHHHHHHHhcccCCEEEEEccCCCCccccchHhhhcCcEEEeeccc-CCcHHHHHHHHH
Q 017868          246 EKIQKAMGTGIDVSFDCAGLNKTMSTALGATCAGGKVCLVGMGHHEMTVPLTPAAVREVDVVGVFRY-KNTWPLCLELLR  324 (365)
Q Consensus       246 ~~~~~~~~~~~d~vid~~g~~~~~~~~~~~l~~~G~~~~~g~~~~~~~~~~~~~~~~~~~i~~~~~~-~~~~~~~~~~l~  324 (365)
                      ++++.  +.++|+|||++|....+..++++++++|+++.+|.......++...+..+++++.+++.. .+.+++++++++
T Consensus       231 ~~~~~--g~g~D~vid~~g~~~~~~~~~~~l~~~G~iv~~g~~~~~~~~~~~~~~~~~~~i~g~~~~~~~~~~~~~~l~~  308 (344)
T 2h6e_A          231 NKLTD--GLGASIAIDLVGTEETTYNLGKLLAQEGAIILVGMEGKRVSLEAFDTAVWNKKLLGSNYGSLNDLEDVVRLSE  308 (344)
T ss_dssp             HHHHT--TCCEEEEEESSCCHHHHHHHHHHEEEEEEEEECCCCSSCCCCCHHHHHHTTCEEEECCSCCHHHHHHHHHHHH
T ss_pred             HHhhc--CCCccEEEECCCChHHHHHHHHHhhcCCEEEEeCCCCCCcccCHHHHhhCCcEEEEEecCCHHHHHHHHHHHH
Confidence            33332  558999999999877889999999999999999875544455556678899999998765 567899999999


Q ss_pred             cCCCCCCCceEEEecCChhhHHHHHHHHhcCCCceEEEEeC
Q 017868          325 SGKIDVKPLVTHRFGFSQKEVEEAFETSARGGTAIKVMFNL  365 (365)
Q Consensus       325 ~g~~~~~~~~~~~~~~~~~~~~~a~~~~~~~~~~gk~vi~~  365 (365)
                      +|++  ++.+ ++|+|  +++++|++.+++++..||+||++
T Consensus       309 ~g~i--~~~i-~~~~l--~~~~~A~~~~~~~~~~gKvvl~~  344 (344)
T 2h6e_A          309 SGKI--KPYI-IKVPL--DDINKAFTNLDEGRVDGRQVITP  344 (344)
T ss_dssp             TTSS--CCCE-EEECC------------------CEEEECC
T ss_pred             cCCC--Ccce-EEEeH--HHHHHHHHHHHcCCCceEEEEeC
Confidence            9998  5667 89999  99999999999888889999974

>2hcy_A Alcohol dehydrogenase 1; tetramer of asymmetric dimers, zinc coordination, intramolec disulfide bonds, oxidoreductase; HET: 8ID; 2.44A {Saccharomyces cerevisiae}

Probab=100.00  E-value=1.3e-53  Score=390.92  Aligned_cols=338  Identities=22%  Similarity=0.317  Sum_probs=291.7

Q ss_pred             chhcceeEEEecCC-ceEEEEecCCCCCCCcEEEEEeeeeeCcccHhhhhccccCCccCCCCcccCccceEEEEEeCCCC
Q 017868           14 GEEVNMAAWLLGVN-TLKIQPFELPSLGPYDVLVRMKAVGICGSDVHYLKTLRCADFVVKEPMVIGHECAGVIEKVGSEV   92 (365)
Q Consensus        14 ~~~~~~~~~~~~~~-~l~~~~~~~p~~~~~eVlI~v~~~~l~~~D~~~~~g~~~~~~~~~~p~~~G~e~~G~V~~vG~~v   92 (365)
                      +|.+||++++.+++ +++++++|.|+|+++||+|||.++++|++|++.+.|...  ....+|.++|||++|+|+++|++|
T Consensus         2 ~p~~mka~~~~~~g~~l~~~~~~~P~~~~~eVlVkv~a~gi~~~D~~~~~g~~~--~~~~~p~v~G~E~~G~V~~vG~~v   79 (347)
T 2hcy_A            2 IPETQKGVIFYESHGKLEYKDIPVPKPKANELLINVKYSGVCHTDLHAWHGDWP--LPVKLPLVGGHEGAGVVVGMGENV   79 (347)
T ss_dssp             CCSEEEEEEESSTTCCCEEEEEECCCCCTTEEEEEEEEEEECHHHHHHHHTCSS--SCCCSSEECCCEEEEEEEEECTTC
T ss_pred             CCcccEEEEEeCCCCCCEEEEeeCCCCCCCEEEEEEEEEEechhHHHHhcCCCC--CCCCCCcccCccceEEEEEECCCC
Confidence            45679999998876 899999999999999999999999999999999887532  124579999999999999999999


Q ss_pred             CCCCCCCEEEEcCCc-CCCCCccccCCCCCCCCCccccccCCCCcceeeEEeecCCceEECCCCCCcchhccch-hhHHH
Q 017868           93 KTLVPGDRVALEPGI-SCWRCDHCKGGRYNLCPEMKFFATPPVHGSLANQVVHPADLCFKLPDNVSLEEGAMCE-PLSVG  170 (365)
Q Consensus        93 ~~~~~Gd~V~~~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~v~~~~~~~iP~~~~~~~a~~~~-~~~~a  170 (365)
                      ++|++||||++.+.. +|++|++|+.+++++|++....+. ..+|+|+||+++++++++++|+++++++|+.++ .+.||
T Consensus        80 ~~~~~GdrV~~~~~~~~cg~C~~C~~g~~~~C~~~~~~g~-~~~G~~aey~~v~~~~~~~iP~~~~~~~aa~l~~~~~ta  158 (347)
T 2hcy_A           80 KGWKIGDYAGIKWLNGSCMACEYCELGNESNCPHADLSGY-THDGSFQQYATADAVQAAHIPQGTDLAQVAPILCAGITV  158 (347)
T ss_dssp             CSCCTTCEEEECSEEECCSSSTTTTTTCGGGCTTCEEBTT-TBCCSSBSEEEEETTTSEEECTTCCHHHHGGGGTHHHHH
T ss_pred             CCCcCCCEEEEecCCCCCCCChhhhCCCcccCcccccccc-CCCCcceeEEEeccccEEECCCCCCHHHHHHHhhhHHHH
Confidence            999999999986654 599999999999999998776664 457999999999999999999999999998876 77899


Q ss_pred             HHHHHhcCCCCCCEEEEEcC-CHHHHHHHHHHHHHCCCCeEEEEeCChhHHHHHHHcCCCEEEeCCCCcccHHHHHHHHH
Q 017868          171 LHACRRANIGPETNVLIMGA-GPIGLVTMLGAPRAFGAPRIVIVDVDDYRLSVAKEIGADNIVKVSTNLQDIAEEVEKIQ  249 (365)
Q Consensus       171 ~~~~~~~~~~~g~~vlI~G~-g~~G~~ai~~l~~~~g~~~vi~v~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~i~~~~  249 (365)
                      |++++..++++|++|||+|+ |++|+++++ +++..|+ +|+++++++++.+.++++|++.++++.. .+++.+.+++..
T Consensus       159 ~~~l~~~~~~~g~~vlV~Ga~ggiG~~~~~-~a~~~Ga-~V~~~~~~~~~~~~~~~~g~~~~~d~~~-~~~~~~~~~~~~  235 (347)
T 2hcy_A          159 YKALKSANLMAGHWVAISGAAGGLGSLAVQ-YAKAMGY-RVLGIDGGEGKEELFRSIGGEVFIDFTK-EKDIVGAVLKAT  235 (347)
T ss_dssp             HHHHHTTTCCTTCEEEEETTTSHHHHHHHH-HHHHTTC-EEEEEECSTTHHHHHHHTTCCEEEETTT-CSCHHHHHHHHH
T ss_pred             HHHHHhcCCCCCCEEEEECCCchHHHHHHH-HHHHCCC-cEEEEcCCHHHHHHHHHcCCceEEecCc-cHhHHHHHHHHh
Confidence            99998889999999999998 999999999 8889999 7888888899999999999998887642 357777777654


Q ss_pred             HHhCCCceEEEeCCCCHHHHHHHHHhcccCCEEEEEccCCC-CccccchHhhhcCcEEEeeccc-CCcHHHHHHHHHcCC
Q 017868          250 KAMGTGIDVSFDCAGLNKTMSTALGATCAGGKVCLVGMGHH-EMTVPLTPAAVREVDVVGVFRY-KNTWPLCLELLRSGK  327 (365)
Q Consensus       250 ~~~~~~~d~vid~~g~~~~~~~~~~~l~~~G~~~~~g~~~~-~~~~~~~~~~~~~~~i~~~~~~-~~~~~~~~~~l~~g~  327 (365)
                      .  + ++|++||++|....+..++++|+++|+++.+|.... ...++...+..+++++.+++.. .+.++++++++++|.
T Consensus       236 ~--~-~~D~vi~~~g~~~~~~~~~~~l~~~G~iv~~g~~~~~~~~~~~~~~~~~~~~i~g~~~~~~~~~~~~~~l~~~g~  312 (347)
T 2hcy_A          236 D--G-GAHGVINVSVSEAAIEASTRYVRANGTTVLVGMPAGAKCCSDVFNQVVKSISIVGSYVGNRADTREALDFFARGL  312 (347)
T ss_dssp             T--S-CEEEEEECSSCHHHHHHHTTSEEEEEEEEECCCCTTCEEEEEHHHHHHTTCEEEECCCCCHHHHHHHHHHHHTTS
T ss_pred             C--C-CCCEEEECCCcHHHHHHHHHHHhcCCEEEEEeCCCCCCCCCCHHHHhhCCcEEEEccCCCHHHHHHHHHHHHhCC
Confidence            3  4 899999999987788999999999999999986542 3345555677899999998765 467899999999999


Q ss_pred             CCCCCceEEEecCChhhHHHHHHHHhcCCCceEEEEeC
Q 017868          328 IDVKPLVTHRFGFSQKEVEEAFETSARGGTAIKVMFNL  365 (365)
Q Consensus       328 ~~~~~~~~~~~~~~~~~~~~a~~~~~~~~~~gk~vi~~  365 (365)
                      +.  +. +++|+|  +++.+|++.+++++..||+|+++
T Consensus       313 l~--~~-~~~~~l--~~~~~A~~~~~~~~~~gKvvv~~  345 (347)
T 2hcy_A          313 VK--SP-IKVVGL--STLPEIYEKMEKGQIVGRYVVDT  345 (347)
T ss_dssp             CC--CC-EEEEEG--GGHHHHHHHHHTTCCSSEEEEES
T ss_pred             Cc--cc-eEEEcH--HHHHHHHHHHHcCCcceeEEEec
Confidence            94  43 578999  99999999999988889999974

>3uog_A Alcohol dehydrogenase; structural genomics, protein structure initiative, PSI-biolo YORK structural genomics research consortium; 2.20A {Sinorhizobium meliloti 1021}

Probab=100.00  E-value=1.5e-53  Score=392.56  Aligned_cols=331  Identities=22%  Similarity=0.279  Sum_probs=287.3

Q ss_pred             cchhcceeEEEe--cCCceEEEEecCCCCCCCcEEEEEeeeeeCcccHhhhhccccCCccCCCCcccCccceEEEEEeCC
Q 017868           13 DGEEVNMAAWLL--GVNTLKIQPFELPSLGPYDVLVRMKAVGICGSDVHYLKTLRCADFVVKEPMVIGHECAGVIEKVGS   90 (365)
Q Consensus        13 ~~~~~~~~~~~~--~~~~l~~~~~~~p~~~~~eVlI~v~~~~l~~~D~~~~~g~~~~~~~~~~p~~~G~e~~G~V~~vG~   90 (365)
                      +|+.+||++++.  +++.+++.++|.|+|+++||+|||.++++|++|++.+.|.+..  ...+|.++|||++|+|+++|+
T Consensus        23 ~m~~~mkA~~~~~~~~~~l~~~e~p~P~~~~~eVlVkv~a~gi~~~D~~~~~g~~~~--~~~~P~v~GhE~~G~V~~vG~  100 (363)
T 3uog_A           23 MMSKWMQEWSTETVAPHDLKLAERPVPEAGEHDIIVRTLAVSLNYRDKLVLETGMGL--DLAFPFVPASDMSGVVEAVGK  100 (363)
T ss_dssp             CCCSEEEEEEBSCTTTTCCEEEEEECCCCCTTEEEEEEEEEECCHHHHHHHHHCTTC--CCCSSBCCCCEEEEEEEEECT
T ss_pred             cCchhhEEEEEccCCCCCcEEEeeeCCCCCCCEEEEEEEEEecCHHHHHHhcCCCCC--CCCCCcCcccceEEEEEEECC
Confidence            556779999999  4579999999999999999999999999999999999875432  256799999999999999999


Q ss_pred             CCCCCCCCCEEEEcCCcCCCCCccccCCCCCCCCCc---cc-cccCCCCcceeeEEeecCCceEECCCCCCcchhccch-
Q 017868           91 EVKTLVPGDRVALEPGISCWRCDHCKGGRYNLCPEM---KF-FATPPVHGSLANQVVHPADLCFKLPDNVSLEEGAMCE-  165 (365)
Q Consensus        91 ~v~~~~~Gd~V~~~~~~~~~~~~~~~~~~~~~~~~~---~~-~~~~~~~g~~~~~~~v~~~~~~~iP~~~~~~~a~~~~-  165 (365)
                      +|++|++||||++.+..      +|..+. ++|.+.   .. .+ ...+|+|+||+++++++++++|+++++++|+.++ 
T Consensus       101 ~v~~~~vGDrV~~~~~~------~c~~g~-~~c~~~~~~~~~~g-~~~~G~~aey~~v~~~~~~~iP~~~~~~~aa~l~~  172 (363)
T 3uog_A          101 SVTRFRPGDRVISTFAP------GWLDGL-RPGTGRTPAYETLG-GAHPGVLSEYVVLPEGWFVAAPKSLDAAEASTLPC  172 (363)
T ss_dssp             TCCSCCTTCEEEECSST------TCCSSS-CCSCSSCCCCCCTT-TTSCCCCBSEEEEEGGGEEECCTTSCHHHHHTTTT
T ss_pred             CCCCCCCCCEEEEeccc------cccccc-cccccccccccccC-cCCCCcceeEEEechHHeEECCCCCCHHHHhhccc
Confidence            99999999999997543      566677 778632   11 22 2357999999999999999999999999999886 


Q ss_pred             hhHHHHHHH-HhcCCCCCCEEEEEcCCHHHHHHHHHHHHHCCCCeEEEEeCChhHHHHHHHcCCCEEEeCCCCcccHHHH
Q 017868          166 PLSVGLHAC-RRANIGPETNVLIMGAGPIGLVTMLGAPRAFGAPRIVIVDVDDYRLSVAKEIGADNIVKVSTNLQDIAEE  244 (365)
Q Consensus       166 ~~~~a~~~~-~~~~~~~g~~vlI~G~g~~G~~ai~~l~~~~g~~~vi~v~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~  244 (365)
                      ++.|||+++ +.+++++|++|||+|+|++|++++| +++..|+ +|+++++++++.++++++|++.+++  ...+++.+.
T Consensus       173 ~~~ta~~al~~~~~~~~g~~VlV~G~G~vG~~a~q-la~~~Ga-~Vi~~~~~~~~~~~~~~lGa~~vi~--~~~~~~~~~  248 (363)
T 3uog_A          173 AGLTAWFALVEKGHLRAGDRVVVQGTGGVALFGLQ-IAKATGA-EVIVTSSSREKLDRAFALGADHGIN--RLEEDWVER  248 (363)
T ss_dssp             HHHHHHHHHTTTTCCCTTCEEEEESSBHHHHHHHH-HHHHTTC-EEEEEESCHHHHHHHHHHTCSEEEE--TTTSCHHHH
T ss_pred             HHHHHHHHHHHhcCCCCCCEEEEECCCHHHHHHHH-HHHHcCC-EEEEEecCchhHHHHHHcCCCEEEc--CCcccHHHH
Confidence            788999999 6789999999999999999999999 9999999 7889999999999999999999887  344678888


Q ss_pred             HHHHHHHhCCCceEEEeCCCCHHHHHHHHHhcccCCEEEEEccCCC-CccccchHhhhcCcEEEeeccc-CCcHHHHHHH
Q 017868          245 VEKIQKAMGTGIDVSFDCAGLNKTMSTALGATCAGGKVCLVGMGHH-EMTVPLTPAAVREVDVVGVFRY-KNTWPLCLEL  322 (365)
Q Consensus       245 i~~~~~~~~~~~d~vid~~g~~~~~~~~~~~l~~~G~~~~~g~~~~-~~~~~~~~~~~~~~~i~~~~~~-~~~~~~~~~~  322 (365)
                      +++.+.  +.++|+|||++|. ..+..++++++++|+++.+|.... ...++...+..+++++.++... .+.+++++++
T Consensus       249 v~~~~~--g~g~D~vid~~g~-~~~~~~~~~l~~~G~iv~~G~~~~~~~~~~~~~~~~~~~~i~g~~~~~~~~~~~~~~l  325 (363)
T 3uog_A          249 VYALTG--DRGADHILEIAGG-AGLGQSLKAVAPDGRISVIGVLEGFEVSGPVGPLLLKSPVVQGISVGHRRALEDLVGA  325 (363)
T ss_dssp             HHHHHT--TCCEEEEEEETTS-SCHHHHHHHEEEEEEEEEECCCSSCEECCBTTHHHHTCCEEEECCCCCHHHHHHHHHH
T ss_pred             HHHHhC--CCCceEEEECCCh-HHHHHHHHHhhcCCEEEEEecCCCcccCcCHHHHHhCCcEEEEEecCCHHHHHHHHHH
Confidence            887753  6699999999995 478999999999999999986544 3466677788999999998766 5789999999


Q ss_pred             HHcCCCCCCCceEEEecCChhhHHHHHHHHhcCCCceEEEEeC
Q 017868          323 LRSGKIDVKPLVTHRFGFSQKEVEEAFETSARGGTAIKVMFNL  365 (365)
Q Consensus       323 l~~g~~~~~~~~~~~~~~~~~~~~~a~~~~~~~~~~gk~vi~~  365 (365)
                      ++++.+  ++.++++|+|  +++.+|++.++++. .||+||++
T Consensus       326 ~~~g~l--~~~i~~~~~l--~~~~~A~~~~~~~~-~gKvvi~~  363 (363)
T 3uog_A          326 VDRLGL--KPVIDMRYKF--TEVPEALAHLDRGP-FGKVVIEF  363 (363)
T ss_dssp             HHHHTC--CCCEEEEEEG--GGHHHHHHTGGGCC-SBEEEEEC
T ss_pred             HHcCCC--ccceeeEEcH--HHHHHHHHHHHcCC-CccEEEeC
Confidence            999988  7889999999  99999999999998 99999985

>2eih_A Alcohol dehydrogenase; zinc ION binding protein, structural genomics, NPPSFA, natio project on protein structural and functional analyses; 2.30A {Thermus thermophilus}

Probab=100.00  E-value=9.4e-54  Score=391.16  Aligned_cols=334  Identities=28%  Similarity=0.473  Sum_probs=290.7

Q ss_pred             ceeEEEecCC---ceEEEEecCCCCCCCcEEEEEeeeeeCcccHhhhhccccCCccCCCCcccCccceEEEEEeCCCCCC
Q 017868           18 NMAAWLLGVN---TLKIQPFELPSLGPYDVLVRMKAVGICGSDVHYLKTLRCADFVVKEPMVIGHECAGVIEKVGSEVKT   94 (365)
Q Consensus        18 ~~~~~~~~~~---~l~~~~~~~p~~~~~eVlI~v~~~~l~~~D~~~~~g~~~~~~~~~~p~~~G~e~~G~V~~vG~~v~~   94 (365)
                      ||++++.+++   .+++.++|.|+|+++||+|||.++++|++|++...|.+..  ...+|.++|||++|+|+++|++|++
T Consensus         1 Mka~~~~~~g~~~~l~~~~~~~P~~~~~eVlVkv~a~gi~~~D~~~~~g~~~~--~~~~p~v~G~E~~G~V~~vG~~v~~   78 (343)
T 2eih_A            1 MRAVVMRARGGPEVLEVADLPVPEPGPKEVRVRLKAAALNHLDVWVRKGVASP--KLPLPHVLGADGSGVVDAVGPGVEG   78 (343)
T ss_dssp             CEEEEECSSSSGGGEEEEECCCCCCCTTEEEEEEEEEECCHHHHHHHHTSSST--TCCSSEECCSEEEEEEEEECSSCCS
T ss_pred             CeEEEEecCCCCceEEEEecCCCCCCCCEEEEEEEEEEeCHHHHHHhcCCCCC--CCCCCcccccceEEEEEEECCCCCC
Confidence            6788888765   3899999999999999999999999999999998874321  1367899999999999999999999


Q ss_pred             CCCCCEEEEcCCcCCCCCccccCCCCCCCCCccccccCCCCcceeeEEeecCCceEECCCCCCcchhccch-hhHHHHHH
Q 017868           95 LVPGDRVALEPGISCWRCDHCKGGRYNLCPEMKFFATPPVHGSLANQVVHPADLCFKLPDNVSLEEGAMCE-PLSVGLHA  173 (365)
Q Consensus        95 ~~~Gd~V~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~v~~~~~~~iP~~~~~~~a~~~~-~~~~a~~~  173 (365)
                      |++||||++.+..+|+.|++|+.+++++|++....|. ...|+|+||+++++++++++|+++++++|+.++ ++.|||++
T Consensus        79 ~~vGdrV~~~~~~~cg~c~~C~~g~~~~C~~~~~~G~-~~~G~~aey~~v~~~~~~~~P~~~~~~~aa~l~~~~~ta~~a  157 (343)
T 2eih_A           79 FAPGDEVVINPGLSCGRCERCLAGEDNLCPRYQILGE-HRHGTYAEYVVLPEANLAPKPKNLSFEEAAAIPLTFLTAWQM  157 (343)
T ss_dssp             CCTTCEEEECCEECCSCSHHHHTTCGGGCTTCEETTT-SSCCSSBSEEEEEGGGEEECCTTSCHHHHHHSHHHHHHHHHH
T ss_pred             CCCCCEEEECCCCCcccchhhccCcccccccccccCc-CCCccceeEEEeChHHeEECCCCCCHHHHhhchhhHHHHHHH
Confidence            9999999999999999999999999999998877664 347999999999999999999999999999665 89999999


Q ss_pred             HHh-cCCCCCCEEEEEcC-CHHHHHHHHHHHHHCCCCeEEEEeCChhHHHHHHHcCCCEEEeCCCCcccHHHHHHHHHHH
Q 017868          174 CRR-ANIGPETNVLIMGA-GPIGLVTMLGAPRAFGAPRIVIVDVDDYRLSVAKEIGADNIVKVSTNLQDIAEEVEKIQKA  251 (365)
Q Consensus       174 ~~~-~~~~~g~~vlI~G~-g~~G~~ai~~l~~~~g~~~vi~v~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~i~~~~~~  251 (365)
                      ++. +++++|++|||+|+ |++|++++| +++..|+ +|+++++++++.+.++++|++.++++..  +++.+.+++.+. 
T Consensus       158 l~~~~~~~~g~~vlV~Gasg~iG~~~~~-~a~~~G~-~Vi~~~~~~~~~~~~~~~ga~~~~d~~~--~~~~~~~~~~~~-  232 (343)
T 2eih_A          158 VVDKLGVRPGDDVLVMAAGSGVSVAAIQ-IAKLFGA-RVIATAGSEDKLRRAKALGADETVNYTH--PDWPKEVRRLTG-  232 (343)
T ss_dssp             HTTTSCCCTTCEEEECSTTSTTHHHHHH-HHHHTTC-EEEEEESSHHHHHHHHHHTCSEEEETTS--TTHHHHHHHHTT-
T ss_pred             HHHhcCCCCCCEEEEECCCchHHHHHHH-HHHHCCC-EEEEEeCCHHHHHHHHhcCCCEEEcCCc--ccHHHHHHHHhC-
Confidence            965 68999999999998 999999999 8899999 7888999999999999999998887643  466666665532 


Q ss_pred             hCCCceEEEeCCCCHHHHHHHHHhcccCCEEEEEccCCCC-ccccchHhhhcCcEEEeeccc-CCcHHHHHHHHHcCCCC
Q 017868          252 MGTGIDVSFDCAGLNKTMSTALGATCAGGKVCLVGMGHHE-MTVPLTPAAVREVDVVGVFRY-KNTWPLCLELLRSGKID  329 (365)
Q Consensus       252 ~~~~~d~vid~~g~~~~~~~~~~~l~~~G~~~~~g~~~~~-~~~~~~~~~~~~~~i~~~~~~-~~~~~~~~~~l~~g~~~  329 (365)
                       +.++|++||++| ...+..++++++++|+++.+|..... ..++...+..+++++.++... .+.++++++++++|.+ 
T Consensus       233 -~~~~d~vi~~~g-~~~~~~~~~~l~~~G~~v~~g~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~l~~~g~l-  309 (343)
T 2eih_A          233 -GKGADKVVDHTG-ALYFEGVIKATANGGRIAIAGASSGYEGTLPFAHVFYRQLSILGSTMASKSRLFPILRFVEEGKL-  309 (343)
T ss_dssp             -TTCEEEEEESSC-SSSHHHHHHHEEEEEEEEESSCCCSCCCCCCTTHHHHTTCEEEECCSCCGGGHHHHHHHHHHTSS-
T ss_pred             -CCCceEEEECCC-HHHHHHHHHhhccCCEEEEEecCCCCcCccCHHHHHhCCcEEEEecCccHHHHHHHHHHHHcCCC-
Confidence             468999999999 45888999999999999999865433 235556678899999998754 6789999999999998 


Q ss_pred             CCCceEEEecCChhhHHHHHHHHhcCCCceEEEEeC
Q 017868          330 VKPLVTHRFGFSQKEVEEAFETSARGGTAIKVMFNL  365 (365)
Q Consensus       330 ~~~~~~~~~~~~~~~~~~a~~~~~~~~~~gk~vi~~  365 (365)
                       ++.++++|+|  +++.+|++.+++++..||+|+++
T Consensus       310 -~~~i~~~~~l--~~~~~A~~~~~~~~~~gKvvv~~  342 (343)
T 2eih_A          310 -KPVVGQVLPL--EAAAEGHRLLEERRVFGKVVLQV  342 (343)
T ss_dssp             -CCCEEEEEEG--GGHHHHHHHHHTTCSSSEEEEEC
T ss_pred             -CCceeEEeeH--HHHHHHHHHHHcCCCceEEEEec
Confidence             6788899999  99999999999988889999974

>1piw_A Hypothetical zinc-type alcohol dehydrogenase- like protein in PRE5-FET4 intergenic...; ADH topology, NADP(H)dependent, oxidoreductase; HET: NAP; 3.00A {Saccharomyces cerevisiae} SCOP: b.35.1.2 c.2.1.1 PDB: 1ps0_A* 1q1n_A

Probab=100.00  E-value=1.2e-54  Score=399.40  Aligned_cols=332  Identities=23%  Similarity=0.330  Sum_probs=284.1

Q ss_pred             chhcceeEEEecCC-ceEEEE--ecCCCCCCCcEEEEEeeeeeCcccHhhhhccccCCccCCCCcccCccceEEEEEeCC
Q 017868           14 GEEVNMAAWLLGVN-TLKIQP--FELPSLGPYDVLVRMKAVGICGSDVHYLKTLRCADFVVKEPMVIGHECAGVIEKVGS   90 (365)
Q Consensus        14 ~~~~~~~~~~~~~~-~l~~~~--~~~p~~~~~eVlI~v~~~~l~~~D~~~~~g~~~~~~~~~~p~~~G~e~~G~V~~vG~   90 (365)
                      ++.+||++++.+++ ++++.+  +|.|+|+++||+|||.++++|++|++.+.|...   ...+|.++|||++|+|+++|+
T Consensus         3 ~p~~mka~~~~~~~~~l~~~~~~~~~P~~~~~eVlVkv~a~gi~~~D~~~~~g~~~---~~~~p~v~GhE~~G~V~~vG~   79 (360)
T 1piw_A            3 YPEKFEGIAIQSHEDWKNPKKTKYDPKPFYDHDIDIKIEACGVCGSDIHCAAGHWG---NMKMPLVVGHEIVGKVVKLGP   79 (360)
T ss_dssp             TTTCEEEEEECCSSSTTSCEEEEECCCCCCTTEEEEEEEEEEECHHHHHHHTTTTS---CCCSSEECCCCEEEEEEEECT
T ss_pred             CChheEEEEEecCCCCeeEEeccccCCCCCCCeEEEEEEEeccchhhHHHhcCCCC---CCCCCcccCcCceEEEEEeCC
Confidence            56679999998875 799999  999999999999999999999999999887432   135689999999999999999


Q ss_pred             CCC-CCCCCCEEEEc-CCcCCCCCccccCCCCCCCCCc-ccc------ccCCCCcceeeEEeecCCceEECCCCCCcchh
Q 017868           91 EVK-TLVPGDRVALE-PGISCWRCDHCKGGRYNLCPEM-KFF------ATPPVHGSLANQVVHPADLCFKLPDNVSLEEG  161 (365)
Q Consensus        91 ~v~-~~~~Gd~V~~~-~~~~~~~~~~~~~~~~~~~~~~-~~~------~~~~~~g~~~~~~~v~~~~~~~iP~~~~~~~a  161 (365)
                      +|+ +|++||||++. ...+|++|.+|+.+++++|++. ..+      +. ..+|+|+||+++++++++++|+++++++|
T Consensus        80 ~v~~~~~~GdrV~~~~~~~~cg~C~~C~~g~~~~C~~~~~~~~~~~~~g~-~~~G~~aey~~v~~~~~~~iP~~~~~~~a  158 (360)
T 1piw_A           80 KSNSGLKVGQRVGVGAQVFSCLECDRCKNDNEPYCTKFVTTYSQPYEDGY-VSQGGYANYVRVHEHFVVPIPENIPSHLA  158 (360)
T ss_dssp             TCCSSCCTTCEEEECSEEECCSCSHHHHTTCGGGCTTCEESSSCBCTTSC-BCCCSSBSEEEEEGGGEEECCTTSCHHHH
T ss_pred             CCCCCCCCCCEEEEecCCCCCCCChhhcCCCcccCcchhhccccccCCCc-cCCCcceeEEEEchhheEECCCCCCHHHh
Confidence            999 99999999654 4468999999999999999875 222      22 35699999999999999999999999999


Q ss_pred             ccch-hhHHHHHHHHhcCCCCCCEEEEEcCCHHHHHHHHHHHHHCCCCeEEEEeCChhHHHHHHHcCCCEEEeCCCCccc
Q 017868          162 AMCE-PLSVGLHACRRANIGPETNVLIMGAGPIGLVTMLGAPRAFGAPRIVIVDVDDYRLSVAKEIGADNIVKVSTNLQD  240 (365)
Q Consensus       162 ~~~~-~~~~a~~~~~~~~~~~g~~vlI~G~g~~G~~ai~~l~~~~g~~~vi~v~~~~~~~~~~~~~g~~~~~~~~~~~~~  240 (365)
                      +.++ ++.|||++++.+++++|++|||+|+|++|++++| +++.+|+ +|+++++++++.++++++|++.++++... .+
T Consensus       159 a~l~~~~~ta~~~l~~~~~~~g~~VlV~GaG~vG~~~~q-lak~~Ga-~Vi~~~~~~~~~~~~~~lGa~~v~~~~~~-~~  235 (360)
T 1piw_A          159 APLLCGGLTVYSPLVRNGCGPGKKVGIVGLGGIGSMGTL-ISKAMGA-ETYVISRSSRKREDAMKMGADHYIATLEE-GD  235 (360)
T ss_dssp             GGGGTHHHHHHHHHHHTTCSTTCEEEEECCSHHHHHHHH-HHHHHTC-EEEEEESSSTTHHHHHHHTCSEEEEGGGT-SC
T ss_pred             hhhhhhHHHHHHHHHHcCCCCCCEEEEECCCHHHHHHHH-HHHHCCC-EEEEEcCCHHHHHHHHHcCCCEEEcCcCc-hH
Confidence            8876 7889999998889999999999999999999999 8999999 58999999999999999999998876431 14


Q ss_pred             HHHHHHHHHHHhCCCceEEEeCCCC--HHHHHHHHHhcccCCEEEEEccCCCCc-cccchHhhhcCcEEEeeccc-CCcH
Q 017868          241 IAEEVEKIQKAMGTGIDVSFDCAGL--NKTMSTALGATCAGGKVCLVGMGHHEM-TVPLTPAAVREVDVVGVFRY-KNTW  316 (365)
Q Consensus       241 ~~~~i~~~~~~~~~~~d~vid~~g~--~~~~~~~~~~l~~~G~~~~~g~~~~~~-~~~~~~~~~~~~~i~~~~~~-~~~~  316 (365)
                      +.+.+       .+++|+|||++|.  ...+..++++++++|+++.+|.... . .++...+..+++++.+++.. .+.+
T Consensus       236 ~~~~~-------~~~~D~vid~~g~~~~~~~~~~~~~l~~~G~iv~~g~~~~-~~~~~~~~~~~~~~~i~g~~~~~~~~~  307 (360)
T 1piw_A          236 WGEKY-------FDTFDLIVVCASSLTDIDFNIMPKAMKVGGRIVSISIPEQ-HEMLSLKPYGLKAVSISYSALGSIKEL  307 (360)
T ss_dssp             HHHHS-------CSCEEEEEECCSCSTTCCTTTGGGGEEEEEEEEECCCCCS-SCCEEECGGGCBSCEEEECCCCCHHHH
T ss_pred             HHHHh-------hcCCCEEEECCCCCcHHHHHHHHHHhcCCCEEEEecCCCC-ccccCHHHHHhCCeEEEEEecCCHHHH
Confidence            43332       2589999999997  5577889999999999999986544 3 45555678899999998765 4678


Q ss_pred             HHHHHHHHcCCCCCCCceEEEecCChhh--HHHHHHHHhcCCCceEEEEeC
Q 017868          317 PLCLELLRSGKIDVKPLVTHRFGFSQKE--VEEAFETSARGGTAIKVMFNL  365 (365)
Q Consensus       317 ~~~~~~l~~g~~~~~~~~~~~~~~~~~~--~~~a~~~~~~~~~~gk~vi~~  365 (365)
                      +++++++++|++  ++.+ ++|++  ++  +.+|++.+++++..||+|+++
T Consensus       308 ~~~~~l~~~g~l--~~~i-~~~~l--~~~~~~~A~~~~~~~~~~gKvvi~~  353 (360)
T 1piw_A          308 NQLLKLVSEKDI--KIWV-ETLPV--GEAGVHEAFERMEKGDVRYRFTLVG  353 (360)
T ss_dssp             HHHHHHHHHTTC--CCCE-EEEES--SHHHHHHHHHHHHHTCCSSEEEEEC
T ss_pred             HHHHHHHHhCCC--cceE-EEEec--cHhHHHHHHHHHHCCCCceEEEEec
Confidence            999999999998  5556 89999  88  999999999888889999974

>2dph_A Formaldehyde dismutase; dismutation of aldehydes, oxidoreductase; HET: NAD; 2.27A {Pseudomonas putida}

Probab=100.00  E-value=2.4e-54  Score=402.58  Aligned_cols=336  Identities=21%  Similarity=0.397  Sum_probs=287.2

Q ss_pred             cceeEEEecCCceEEEEecCCCC-CC-----CcEEEEEeeeeeCcccHhhhhccccCCccCCCCcccCccceEEEEEeCC
Q 017868           17 VNMAAWLLGVNTLKIQPFELPSL-GP-----YDVLVRMKAVGICGSDVHYLKTLRCADFVVKEPMVIGHECAGVIEKVGS   90 (365)
Q Consensus        17 ~~~~~~~~~~~~l~~~~~~~p~~-~~-----~eVlI~v~~~~l~~~D~~~~~g~~~~~~~~~~p~~~G~e~~G~V~~vG~   90 (365)
                      +||++++.+++.+++.++|.|+| ++     +||+|||.+++||++|++.+.|..    ...+|.++|||++|+|+++|+
T Consensus         2 ~MkA~~~~~~~~l~~~~~p~P~~~~~~~~~~~eVlVkv~a~gic~~D~~~~~G~~----~~~~p~v~GhE~~G~V~~vG~   77 (398)
T 2dph_A            2 GNKSVVYHGTRDLRVETVPYPKLEHNNRKLEHAVILKVVSTNICGSDQHIYRGRF----IVPKGHVLGHEITGEVVEKGS   77 (398)
T ss_dssp             CEEEEEEEETTEEEEEEECCCCSEETTEECTTCEEEEEEEEECCHHHHHHHTTSS----CCCTTCBCCCCEEEEEEEECT
T ss_pred             ccEEEEEEcCCCEEEEEccCCCCCCCcCCCCCeEEEEEEEEeecHHHHHHhcCCC----CCCCCcccCCceEEEEEEECC
Confidence            58999999999999999999998 68     999999999999999999988742    246789999999999999999


Q ss_pred             CCCCCCCCCEEEEcCCcCCCCCccccCCCCCCCCC--c------ccccc--CCCCcceeeEEeecCC--ceEECCCCCCc
Q 017868           91 EVKTLVPGDRVALEPGISCWRCDHCKGGRYNLCPE--M------KFFAT--PPVHGSLANQVVHPAD--LCFKLPDNVSL  158 (365)
Q Consensus        91 ~v~~~~~Gd~V~~~~~~~~~~~~~~~~~~~~~~~~--~------~~~~~--~~~~g~~~~~~~v~~~--~~~~iP~~~~~  158 (365)
                      +|++|++||||++.+..+|+.|++|+.+++++|.+  .      ..++.  ....|+|+||++++++  +++++|+++++
T Consensus        78 ~v~~~~vGDrV~~~~~~~Cg~C~~C~~g~~~~C~~~~~~~~~~~~~~G~~~~~~~G~~aey~~v~~~~~~~~~iP~~~~~  157 (398)
T 2dph_A           78 DVELMDIGDLVSVPFNVACGRCRNCKEARSDVCENNLVNPDADLGAFGFDLKGWSGGQAEYVLVPYADYMLLKFGDKEQA  157 (398)
T ss_dssp             TCCSCCTTCEEECCSBCCCSCSHHHHTTCGGGCCCTTTCSSSSCCBTTTTBSSCCCSSBSEEEESSHHHHCEECSSHHHH
T ss_pred             CCCCCCCCCEEEEcCCCCCCCChhhhCcCcccCCCccccccccccccccccCCCCceeeeeEEeccccCeEEECCCCCCh
Confidence            99999999999999999999999999999999987  2      12222  1356999999999987  89999999999


Q ss_pred             ch----hccch-hhHHHHHHHHhcCCCCCCEEEEEcCCHHHHHHHHHHHHHCCCCeEEEEeCChhHHHHHHHcCCCEEEe
Q 017868          159 EE----GAMCE-PLSVGLHACRRANIGPETNVLIMGAGPIGLVTMLGAPRAFGAPRIVIVDVDDYRLSVAKEIGADNIVK  233 (365)
Q Consensus       159 ~~----a~~~~-~~~~a~~~~~~~~~~~g~~vlI~G~g~~G~~ai~~l~~~~g~~~vi~v~~~~~~~~~~~~~g~~~~~~  233 (365)
                      ++    |+.++ ++.|||++++.+++++|++|||+|+|++|++++| +++.+|+.+|++++++++|.++++++|++ +++
T Consensus       158 ~~~~~~aa~l~~~~~ta~~al~~~~~~~g~~VlV~GaG~vG~~aiq-lak~~Ga~~Vi~~~~~~~~~~~a~~lGa~-~i~  235 (398)
T 2dph_A          158 MEKIKDLTLISDILPTGFHGCVSAGVKPGSHVYIAGAGPVGRCAAA-GARLLGAACVIVGDQNPERLKLLSDAGFE-TID  235 (398)
T ss_dssp             HHTHHHHTTTTTHHHHHHHHHHHTTCCTTCEEEEECCSHHHHHHHH-HHHHHTCSEEEEEESCHHHHHHHHTTTCE-EEE
T ss_pred             hhhcchhhhhcCHHHHHHHHHHHcCCCCCCEEEEECCCHHHHHHHH-HHHHcCCCEEEEEcCCHHHHHHHHHcCCc-EEc
Confidence            87    67665 8999999998899999999999999999999999 89999997899999999999999999995 777


Q ss_pred             CCCCcccH-HHHHHHHHHHhCCCceEEEeCCCCH--------------HHHHHHHHhcccCCEEEEEccCC---------
Q 017868          234 VSTNLQDI-AEEVEKIQKAMGTGIDVSFDCAGLN--------------KTMSTALGATCAGGKVCLVGMGH---------  289 (365)
Q Consensus       234 ~~~~~~~~-~~~i~~~~~~~~~~~d~vid~~g~~--------------~~~~~~~~~l~~~G~~~~~g~~~---------  289 (365)
                      +..  .++ .+.+++++.  +.++|+|||++|..              ..+..++++|+++|+++.+|...         
T Consensus       236 ~~~--~~~~~~~~~~~~~--g~g~Dvvid~~g~~~~~~~~~~~~~~~~~~~~~~~~~l~~gG~iv~~G~~~~~~~~~~~~  311 (398)
T 2dph_A          236 LRN--SAPLRDQIDQILG--KPEVDCGVDAVGFEAHGLGDEANTETPNGALNSLFDVVRAGGAIGIPGIYVGSDPDPVNK  311 (398)
T ss_dssp             TTS--SSCHHHHHHHHHS--SSCEEEEEECSCTTCBCSGGGTTSBCTTHHHHHHHHHEEEEEEEECCSCCCSCCSSCSSH
T ss_pred             CCC--cchHHHHHHHHhC--CCCCCEEEECCCCccccccccccccccHHHHHHHHHHHhcCCEEEEeccccccccccccc
Confidence            643  454 667776642  55899999999964              26889999999999999998651         


Q ss_pred             ----CCccccchHhhhcCcEEEeeccc-CCcHHHHHHHHHcCCCC--CCCceEEEecCChhhHHHHHHHHhcCCCceEEE
Q 017868          290 ----HEMTVPLTPAAVREVDVVGVFRY-KNTWPLCLELLRSGKID--VKPLVTHRFGFSQKEVEEAFETSARGGTAIKVM  362 (365)
Q Consensus       290 ----~~~~~~~~~~~~~~~~i~~~~~~-~~~~~~~~~~l~~g~~~--~~~~~~~~~~~~~~~~~~a~~~~~~~~~~gk~v  362 (365)
                          ....++...+..+++++.+.... .+.++++++++++|++.  +.++++++|+|  +++.+|++.+.+++. +|+|
T Consensus       312 ~~~~~~~~~~~~~~~~k~~~i~g~~~~~~~~~~~~~~l~~~g~l~~~~~~~i~~~~~l--~~~~~A~~~~~~~~~-gKvv  388 (398)
T 2dph_A          312 DAGSGRLHLDFGKMWTKSIRIMTGMAPVTNYNRHLTEAILWDQMPYLSKVMNIEVITL--DQAPDGYAKFDKGSP-AKFV  388 (398)
T ss_dssp             HHHTTEEEEEHHHHHHTTCEEECSSCCGGGTHHHHHHHHHTTCCHHHHHHHCEEEECS--TTHHHHHHHHHTTCS-CEEE
T ss_pred             cccCCcccccHHHHhhcCCEEEEeccCcHHHHHHHHHHHHcCCCCccchhhEEEEEcH--HHHHHHHHHHhcCCc-eEEE
Confidence                12234445577899999987654 56789999999999995  55578899999  999999999998877 9999


Q ss_pred             EeC
Q 017868          363 FNL  365 (365)
Q Consensus       363 i~~  365 (365)
                      |++
T Consensus       389 v~~  391 (398)
T 2dph_A          389 IDP  391 (398)
T ss_dssp             ECT
T ss_pred             Eec
Confidence            874

>1jvb_A NAD(H)-dependent alcohol dehydrogenase; archaeon, zinc, oxidoreductase; HET: MSE; 1.85A {Sulfolobus solfataricus} SCOP: b.35.1.2 c.2.1.1 PDB: 1r37_A* 1nto_A 1nvg_A 3i4c_A 2eer_A*

Probab=100.00  E-value=2.7e-53  Score=388.74  Aligned_cols=335  Identities=29%  Similarity=0.430  Sum_probs=290.7

Q ss_pred             ceeEEEecCC-ceEEEEecCCCCCCCcEEEEEeeeeeCcccHhhhhccccC-----CccCCCCcccCccceEEEEEeCCC
Q 017868           18 NMAAWLLGVN-TLKIQPFELPSLGPYDVLVRMKAVGICGSDVHYLKTLRCA-----DFVVKEPMVIGHECAGVIEKVGSE   91 (365)
Q Consensus        18 ~~~~~~~~~~-~l~~~~~~~p~~~~~eVlI~v~~~~l~~~D~~~~~g~~~~-----~~~~~~p~~~G~e~~G~V~~vG~~   91 (365)
                      ||++++.+++ ++++.++|.|+|+++||+|||.++++|++|++.+.|....     .....+|.++|||++|+|+++|++
T Consensus         1 Mka~~~~~~g~~l~~~~~~~p~~~~~eVlVkv~a~gi~~~D~~~~~g~~~~~~~~~~~~~~~p~i~G~e~~G~V~~vG~~   80 (347)
T 1jvb_A            1 MRAVRLVEIGKPLSLQEIGVPKPKGPQVLIKVEAAGVCHSDVHMRQGRFGNLRIVEDLGVKLPVTLGHEIAGKIEEVGDE   80 (347)
T ss_dssp             CEEEEECSTTSCCEEEECCCCCCCTTCEEEEEEEEEECTHHHHHTTTEETTEETTTTTCCCSCEECCCEEEEEEEEECTT
T ss_pred             CeEEEEecCCCCeEEEEeeCCCCCCCeEEEEEEEEEecHHHHHHhcCCCcccccccccCCCCCccccccceEEEEEECCC
Confidence            6888888774 7999999999999999999999999999999998875321     012367999999999999999999


Q ss_pred             CCCCCCCCEEEEcCCcCCCCCccccCCCCCCCCCccccccCCCCcceeeEEeecC-CceEECCCCCCcchhccch-hhHH
Q 017868           92 VKTLVPGDRVALEPGISCWRCDHCKGGRYNLCPEMKFFATPPVHGSLANQVVHPA-DLCFKLPDNVSLEEGAMCE-PLSV  169 (365)
Q Consensus        92 v~~~~~Gd~V~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~v~~-~~~~~iP~~~~~~~a~~~~-~~~~  169 (365)
                      |++|++||||++.+..+|++|++|+.+++++|++....|. ..+|+|+||+++++ ++++++ +++++++|+.++ ...|
T Consensus        81 v~~~~vGdrV~~~~~~~Cg~C~~C~~g~~~~C~~~~~~G~-~~~G~~aey~~v~~~~~~~~i-~~~~~~~aa~l~~~~~t  158 (347)
T 1jvb_A           81 VVGYSKGDLVAVNPWQGEGNCYYCRIGEEHLCDSPRWLGI-NFDGAYAEYVIVPHYKYMYKL-RRLNAVEAAPLTCSGIT  158 (347)
T ss_dssp             CCSCCTTCEEEECCEECCSSSHHHHTTCGGGCSSCEEBTT-TBCCSSBSEEEESCGGGEEEC-SSSCHHHHGGGGTHHHH
T ss_pred             CCCCCCCCEEEeCCCCCCCCChhhhCcCcccCcccccccc-cCCCcceeEEEecCccceEEe-CCCCHHHcccchhhHHH
Confidence            9999999999999889999999999999999998776664 45799999999999 999999 999999998776 7789


Q ss_pred             HHHHHHhcCCCCCCEEEEEcC-CHHHHHHHHHHHHHC-CCCeEEEEeCChhHHHHHHHcCCCEEEeCCCCcccHHHHHHH
Q 017868          170 GLHACRRANIGPETNVLIMGA-GPIGLVTMLGAPRAF-GAPRIVIVDVDDYRLSVAKEIGADNIVKVSTNLQDIAEEVEK  247 (365)
Q Consensus       170 a~~~~~~~~~~~g~~vlI~G~-g~~G~~ai~~l~~~~-g~~~vi~v~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~i~~  247 (365)
                      ||++++.+++++|++|||+|+ |++|++++| +++.. |+ +|+++++++++.++++++|++.++++..  .++.+.+++
T Consensus       159 a~~~l~~~~~~~g~~vlV~Gagg~iG~~~~~-~a~~~~Ga-~Vi~~~~~~~~~~~~~~~g~~~~~~~~~--~~~~~~~~~  234 (347)
T 1jvb_A          159 TYRAVRKASLDPTKTLLVVGAGGGLGTMAVQ-IAKAVSGA-TIIGVDVREEAVEAAKRAGADYVINASM--QDPLAEIRR  234 (347)
T ss_dssp             HHHHHHHTTCCTTCEEEEETTTSHHHHHHHH-HHHHHTCC-EEEEEESSHHHHHHHHHHTCSEEEETTT--SCHHHHHHH
T ss_pred             HHHHHHhcCCCCCCEEEEECCCccHHHHHHH-HHHHcCCC-eEEEEcCCHHHHHHHHHhCCCEEecCCC--ccHHHHHHH
Confidence            999998899999999999998 599999999 88888 99 6888889999999999999998887643  566666655


Q ss_pred             HHHHhCCCceEEEeCCCCHHHHHHHHHhcccCCEEEEEccCC-CCccccchHhhhcCcEEEeeccc-CCcHHHHHHHHHc
Q 017868          248 IQKAMGTGIDVSFDCAGLNKTMSTALGATCAGGKVCLVGMGH-HEMTVPLTPAAVREVDVVGVFRY-KNTWPLCLELLRS  325 (365)
Q Consensus       248 ~~~~~~~~~d~vid~~g~~~~~~~~~~~l~~~G~~~~~g~~~-~~~~~~~~~~~~~~~~i~~~~~~-~~~~~~~~~~l~~  325 (365)
                      ...  .+++|++||++|....+..++++++++|+++.+|... .. .++...+..+++++.++... .+.++++++++++
T Consensus       235 ~~~--~~~~d~vi~~~g~~~~~~~~~~~l~~~G~iv~~g~~~~~~-~~~~~~~~~~~~~i~g~~~~~~~~~~~~~~l~~~  311 (347)
T 1jvb_A          235 ITE--SKGVDAVIDLNNSEKTLSVYPKALAKQGKYVMVGLFGADL-HYHAPLITLSEIQFVGSLVGNQSDFLGIMRLAEA  311 (347)
T ss_dssp             HTT--TSCEEEEEESCCCHHHHTTGGGGEEEEEEEEECCSSCCCC-CCCHHHHHHHTCEEEECCSCCHHHHHHHHHHHHT
T ss_pred             Hhc--CCCceEEEECCCCHHHHHHHHHHHhcCCEEEEECCCCCCC-CCCHHHHHhCceEEEEEeccCHHHHHHHHHHHHc
Confidence            431  1589999999998778889999999999999998654 33 55555677899999998765 5678999999999


Q ss_pred             CCCCCCCceEEEecCChhhHHHHHHHHhcCCCceEEEEeC
Q 017868          326 GKIDVKPLVTHRFGFSQKEVEEAFETSARGGTAIKVMFNL  365 (365)
Q Consensus       326 g~~~~~~~~~~~~~~~~~~~~~a~~~~~~~~~~gk~vi~~  365 (365)
                      |++  ++.++++|+|  +++++|++.+++++..||+||++
T Consensus       312 g~l--~~~i~~~~~l--~~~~~A~~~~~~~~~~gKvvl~~  347 (347)
T 1jvb_A          312 GKV--KPMITKTMKL--EEANEAIDNLENFKAIGRQVLIP  347 (347)
T ss_dssp             TSS--CCCCEEEEEG--GGHHHHHHHHHTTCCCSEEEEEC
T ss_pred             CCC--CceEEEEEcH--HHHHHHHHHHHCCCCcceEEecC
Confidence            998  6778899999  99999999999988889999975

>3ip1_A Alcohol dehydrogenase, zinc-containing; structural genomics, metal-binding, oxidoreductase, PSI-2, protein structure initiative; 2.09A {Thermotoga maritima}

Probab=100.00  E-value=3.1e-54  Score=402.40  Aligned_cols=338  Identities=25%  Similarity=0.437  Sum_probs=291.1

Q ss_pred             chhcceeEEEecCCceEEEEecCCC-CCCCcEEEEEeeeeeCcccHhhhhccccCCc----cCCCCcccCccceEEEEEe
Q 017868           14 GEEVNMAAWLLGVNTLKIQPFELPS-LGPYDVLVRMKAVGICGSDVHYLKTLRCADF----VVKEPMVIGHECAGVIEKV   88 (365)
Q Consensus        14 ~~~~~~~~~~~~~~~l~~~~~~~p~-~~~~eVlI~v~~~~l~~~D~~~~~g~~~~~~----~~~~p~~~G~e~~G~V~~v   88 (365)
                      .+.+|+++++..++.++++++|.|+ |+++||+|||.++++|++|++.+.|...+..    ...+|.++|||++|+|+++
T Consensus        27 ~~~~m~a~~~~~~~~l~~~~~~~P~~~~~~eVlVkv~a~gi~~~D~~~~~g~~~~~~~~~~~~~~P~i~G~E~~G~V~~v  106 (404)
T 3ip1_A           27 GKLTWLGSKVWRYPEVRVEEVPEPRIEKPTEIIIKVKACGICGSDVHMAQTDEEGYILYPGLTGFPVTLGHEFSGVVVEA  106 (404)
T ss_dssp             TTBBSCGGGTEEEEEEEEEEECCCCCCSTTEEEEEEEEEECCHHHHHHHCBCTTSBBSCCSCBCSSEECCCEEEEEEEEE
T ss_pred             hhhhcceEEEEeCCceEEEEcCCCCCCCcCEEEEEEeEeeeCHHHHHHhcCCCCccccccccCCCCcccCccceEEEEEE
Confidence            3455677777766789999999999 9999999999999999999999887533221    2467999999999999999


Q ss_pred             CCCC------CCCCCCCEEEEcCCcCCCCCccccCCCCCCCCCccccccCCCCcceeeEEeecCCceEECCCCCCc----
Q 017868           89 GSEV------KTLVPGDRVALEPGISCWRCDHCKGGRYNLCPEMKFFATPPVHGSLANQVVHPADLCFKLPDNVSL----  158 (365)
Q Consensus        89 G~~v------~~~~~Gd~V~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~v~~~~~~~iP~~~~~----  158 (365)
                      |++|      ++|++||||++.+..+|+.|.+|+.+++++|++....+. ...|+|+||+++++++++++|+++++    
T Consensus       107 G~~v~~~~~~~~~~vGdrV~~~~~~~Cg~C~~C~~g~~~~C~~~~~~g~-~~~G~~aey~~v~~~~~~~iP~~~~~~~~~  185 (404)
T 3ip1_A          107 GPEAINRRTNKRFEIGEPVCAEEMLWCGHCRPCAEGFPNHCENLNELGF-NVDGAFAEYVKVDAKYAWSLRELEGVYEGD  185 (404)
T ss_dssp             CTTCEETTTTEECCTTCEEEECSEECCSCSHHHHTTCGGGCTTCEEBTT-TBCCSSBSEEEEEGGGEEECGGGBTTBCTH
T ss_pred             CCCccccccCCCCCCCCEEEECCccCCCCCHHHHCcCcccCccccccCC-CCCCCCcceEEechHHeEeccccccccccc
Confidence            9999      899999999999999999999999999999999887776 46799999999999999999998763    


Q ss_pred             --chhccc-hhhHHHHHHHH-h-cCCCCCCEEEEEcCCHHHHHHHHHHHHHCCCCeEEEEeCChhHHHHHHHcCCCEEEe
Q 017868          159 --EEGAMC-EPLSVGLHACR-R-ANIGPETNVLIMGAGPIGLVTMLGAPRAFGAPRIVIVDVDDYRLSVAKEIGADNIVK  233 (365)
Q Consensus       159 --~~a~~~-~~~~~a~~~~~-~-~~~~~g~~vlI~G~g~~G~~ai~~l~~~~g~~~vi~v~~~~~~~~~~~~~g~~~~~~  233 (365)
                        .+++.+ .++.|||+++. . +++++|++|||+|+|++|++++| +++.+|+++|++++++++|.++++++|++.+++
T Consensus       186 ~~~~aa~l~~~~~ta~~al~~~~~~~~~g~~VlV~GaG~vG~~aiq-lak~~Ga~~Vi~~~~~~~~~~~~~~lGa~~vi~  264 (404)
T 3ip1_A          186 RLFLAGSLVEPTSVAYNAVIVRGGGIRPGDNVVILGGGPIGLAAVA-ILKHAGASKVILSEPSEVRRNLAKELGADHVID  264 (404)
T ss_dssp             HHHHHHHTHHHHHHHHHHHTTTSCCCCTTCEEEEECCSHHHHHHHH-HHHHTTCSEEEEECSCHHHHHHHHHHTCSEEEC
T ss_pred             cchhHHhhhhHHHHHHHHHHHhccCCCCCCEEEEECCCHHHHHHHH-HHHHcCCCEEEEECCCHHHHHHHHHcCCCEEEc
Confidence              335554 58999999984 3 58999999999999999999999 999999988999999999999999999999988


Q ss_pred             CCCCcccHHHHHHHHHHHhCCCceEEEeCCCCH-HHHHHHHHhc----ccCCEEEEEccCCCCccccchHhhhcCcEEEe
Q 017868          234 VSTNLQDIAEEVEKIQKAMGTGIDVSFDCAGLN-KTMSTALGAT----CAGGKVCLVGMGHHEMTVPLTPAAVREVDVVG  308 (365)
Q Consensus       234 ~~~~~~~~~~~i~~~~~~~~~~~d~vid~~g~~-~~~~~~~~~l----~~~G~~~~~g~~~~~~~~~~~~~~~~~~~i~~  308 (365)
                      +..  +++.+.+++++.  +.++|+|||++|.+ ..+..+.++|    +++|+++.+|.......++...+..+++++.+
T Consensus       265 ~~~--~~~~~~i~~~t~--g~g~D~vid~~g~~~~~~~~~~~~l~~~~~~~G~iv~~G~~~~~~~~~~~~~~~~~~~i~g  340 (404)
T 3ip1_A          265 PTK--ENFVEAVLDYTN--GLGAKLFLEATGVPQLVWPQIEEVIWRARGINATVAIVARADAKIPLTGEVFQVRRAQIVG  340 (404)
T ss_dssp             TTT--SCHHHHHHHHTT--TCCCSEEEECSSCHHHHHHHHHHHHHHCSCCCCEEEECSCCCSCEEECHHHHHHTTCEEEE
T ss_pred             CCC--CCHHHHHHHHhC--CCCCCEEEECCCCcHHHHHHHHHHHHhccCCCcEEEEeCCCCCCCcccHHHHhccceEEEE
Confidence            643  678888877653  66899999999987 3566777777    99999999997766667777788899999999


Q ss_pred             eccc--CCcHHHHHHHHHcCCCCCCCceEEEecCChhhHHHHHHHHhcCCCceEEEEe
Q 017868          309 VFRY--KNTWPLCLELLRSGKIDVKPLVTHRFGFSQKEVEEAFETSARGGTAIKVMFN  364 (365)
Q Consensus       309 ~~~~--~~~~~~~~~~l~~g~~~~~~~~~~~~~~~~~~~~~a~~~~~~~~~~gk~vi~  364 (365)
                      +...  .+.++++++++++| +.+.+.++++|+|  +++.+|++.+.    .||+||+
T Consensus       341 ~~~~~~~~~~~~~~~ll~~g-l~~~~~i~~~~~l--~~~~~A~~~~~----~GKvvl~  391 (404)
T 3ip1_A          341 SQGHSGHGTFPRVISLMASG-MDMTKIISKTVSM--EEIPEYIKRLQ----TDKSLVK  391 (404)
T ss_dssp             CCCCCSTTHHHHHHHHHHTT-CCGGGGCCEEECG--GGHHHHHHHTT----TCTTCSC
T ss_pred             ecCCCchHHHHHHHHHHHcC-CChhheEEEEeeH--HHHHHHHHHHh----CCcEEEe
Confidence            8754  67899999999999 8777888999999  99999999987    3566654

>1kol_A Formaldehyde dehydrogenase; oxidoreductase; HET: NAD; 1.65A {Pseudomonas putida} SCOP: b.35.1.2 c.2.1.1

Probab=100.00  E-value=1.5e-53  Score=397.56  Aligned_cols=337  Identities=22%  Similarity=0.385  Sum_probs=284.3

Q ss_pred             cceeEEEecCCceEEEEecCCCCC-CCc------EEEEEeeeeeCcccHhhhhccccCCccCCCCcccCccceEEEEEeC
Q 017868           17 VNMAAWLLGVNTLKIQPFELPSLG-PYD------VLVRMKAVGICGSDVHYLKTLRCADFVVKEPMVIGHECAGVIEKVG   89 (365)
Q Consensus        17 ~~~~~~~~~~~~l~~~~~~~p~~~-~~e------VlI~v~~~~l~~~D~~~~~g~~~~~~~~~~p~~~G~e~~G~V~~vG   89 (365)
                      +||++++.+++.++++++|.|+|. ++|      |+|||.+++||++|++.+.|..    ...+|.++|||++|+|+++|
T Consensus         2 ~Mka~~~~~~~~l~~~~~p~P~~~~~~e~~~~~eVlVkv~a~gi~~~D~~~~~g~~----~~~~p~v~GhE~~G~V~~vG   77 (398)
T 1kol_A            2 GNRGVVYLGSGKVEVQKIDYPKMQDPRGKKIEHGVILKVVSTNICGSDQHMVRGRT----TAQVGLVLGHEITGEVIEKG   77 (398)
T ss_dssp             CEEEEEEEETTEEEEEEECCCCSBCTTSCBCSSCEEEEEEEEECCHHHHHHHTTCS----CCCTTCBCCCCEEEEEEEEC
T ss_pred             ccEEEEEecCCceEEEEecCCCCCCCCcccccceEEEEEEEEeechhhHHHHcCCC----CCCCCcccCcccEEEEEEEC
Confidence            589999999889999999999996 899      9999999999999999988742    24568999999999999999


Q ss_pred             CCCCCCCCCCEEEEcCCcCCCCCccccCCCCCCCCCcc------cccc---CCCCcceeeEEeecCC--ceEECCCCCCc
Q 017868           90 SEVKTLVPGDRVALEPGISCWRCDHCKGGRYNLCPEMK------FFAT---PPVHGSLANQVVHPAD--LCFKLPDNVSL  158 (365)
Q Consensus        90 ~~v~~~~~Gd~V~~~~~~~~~~~~~~~~~~~~~~~~~~------~~~~---~~~~g~~~~~~~v~~~--~~~~iP~~~~~  158 (365)
                      ++|++|++||||++.+..+|++|++|+.+++++|++..      .++.   ....|+|+||+++++.  +++++|+++++
T Consensus        78 ~~v~~~~vGDrV~~~~~~~cg~C~~C~~g~~~~C~~~~~~~~~~~~g~~~~~~~~G~~aey~~v~~~~~~~~~~P~~~~~  157 (398)
T 1kol_A           78 RDVENLQIGDLVSVPFNVACGRCRSCKEMHTGVCLTVNPARAGGAYGYVDMGDWTGGQAEYVLVPYADFNLLKLPDRDKA  157 (398)
T ss_dssp             TTCCSCCTTCEEECCSEECCSSSHHHHTTCGGGCSSSCSSSSCEEBTCTTSCCBCCCSBSEEEESSHHHHCEECSCHHHH
T ss_pred             CCCCcCCCCCEEEECCcCCCCCChHHhCcCcccCCCcccccccceeeeccCCCCCceeeeEEEecchhCeEEECCCCcch
Confidence            99999999999999888899999999999999998763      2222   1246999999999987  89999999998


Q ss_pred             ch----hccch-hhHHHHHHHHhcCCCCCCEEEEEcCCHHHHHHHHHHHHHCCCCeEEEEeCChhHHHHHHHcCCCEEEe
Q 017868          159 EE----GAMCE-PLSVGLHACRRANIGPETNVLIMGAGPIGLVTMLGAPRAFGAPRIVIVDVDDYRLSVAKEIGADNIVK  233 (365)
Q Consensus       159 ~~----a~~~~-~~~~a~~~~~~~~~~~g~~vlI~G~g~~G~~ai~~l~~~~g~~~vi~v~~~~~~~~~~~~~g~~~~~~  233 (365)
                      ++    ++.++ ++.|||++++.+++++|++|||+|+|++|++++| +|+.+|+++|++++++++|.++++++|++ +++
T Consensus       158 ~~~~~~aa~l~~~~~ta~~al~~~~~~~g~~VlV~GaG~vG~~aiq-lAk~~Ga~~Vi~~~~~~~~~~~a~~lGa~-~i~  235 (398)
T 1kol_A          158 MEKIRDLTCLSDILPTGYHGAVTAGVGPGSTVYVAGAGPVGLAAAA-SARLLGAAVVIVGDLNPARLAHAKAQGFE-IAD  235 (398)
T ss_dssp             HHTHHHHGGGGTHHHHHHHHHHHTTCCTTCEEEEECCSHHHHHHHH-HHHHTTCSEEEEEESCHHHHHHHHHTTCE-EEE
T ss_pred             hhhcccccccccHHHHHHHHHHHcCCCCCCEEEEECCcHHHHHHHH-HHHHCCCCeEEEEcCCHHHHHHHHHcCCc-EEc
Confidence            87    56665 8899999998899999999999999999999999 99999998899999999999999999997 677


Q ss_pred             CCCCcccHHHHHHHHHHHhCCCceEEEeCCCCH---------------HHHHHHHHhcccCCEEEEEccC-C-C------
Q 017868          234 VSTNLQDIAEEVEKIQKAMGTGIDVSFDCAGLN---------------KTMSTALGATCAGGKVCLVGMG-H-H------  290 (365)
Q Consensus       234 ~~~~~~~~~~~i~~~~~~~~~~~d~vid~~g~~---------------~~~~~~~~~l~~~G~~~~~g~~-~-~------  290 (365)
                      +.. ..++.+.+++.+.  +.++|+|||++|..               ..+..++++++++|+++.+|.. . .      
T Consensus       236 ~~~-~~~~~~~v~~~t~--g~g~Dvvid~~G~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~G~iv~~G~~~~~~~~~~~~  312 (398)
T 1kol_A          236 LSL-DTPLHEQIAALLG--EPEVDCAVDAVGFEARGHGHEGAKHEAPATVLNSLMQVTRVAGKIGIPGLYVTEDPGAVDA  312 (398)
T ss_dssp             TTS-SSCHHHHHHHHHS--SSCEEEEEECCCTTCBCSSTTGGGSBCTTHHHHHHHHHEEEEEEEEECSCCCSCCTTCSSH
T ss_pred             cCC-cchHHHHHHHHhC--CCCCCEEEECCCCcccccccccccccchHHHHHHHHHHHhcCCEEEEeccccCCccccccc
Confidence            643 2346777776642  56899999999975               3688999999999999999854 1 1      


Q ss_pred             -----CccccchHhhhcCcEEEeeccc-CCcHHHHHHHHHcCCCC-CCCceEEEecCChhhHHHHHHHHhcCCCceEEEE
Q 017868          291 -----EMTVPLTPAAVREVDVVGVFRY-KNTWPLCLELLRSGKID-VKPLVTHRFGFSQKEVEEAFETSARGGTAIKVMF  363 (365)
Q Consensus       291 -----~~~~~~~~~~~~~~~i~~~~~~-~~~~~~~~~~l~~g~~~-~~~~~~~~~~~~~~~~~~a~~~~~~~~~~gk~vi  363 (365)
                           ...++...++.+++++.+.... .+.++++++++++|.+. ..+.++++|+|  +++.+|++.+.+++. ||+||
T Consensus       313 ~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~l~~~g~l~~~~~~i~~~~~l--~~~~~A~~~~~~~~~-gKvvi  389 (398)
T 1kol_A          313 AAKIGSLSIRFGLGWAKSHSFHTGQTPVMKYNRALMQAIMWDRINIAEVVGVQVISL--DDAPRGYGEFDAGVP-KKFVI  389 (398)
T ss_dssp             HHHTTCCCCCHHHHHHTTCEEEESSCCHHHHHHHHHHHHHTTSCCHHHHHTEEEECG--GGHHHHHHHHHHTCS-CEEEE
T ss_pred             ccccccccccHHHHhhcccEEEecccChHHHHHHHHHHHHcCCCCCccceeEEEEcH--HHHHHHHHHHhCCCc-eEEEE
Confidence                 1233344567788998876543 45678899999999995 23567899999  999999999988876 99999


Q ss_pred             eC
Q 017868          364 NL  365 (365)
Q Consensus       364 ~~  365 (365)
                      ++
T Consensus       390 ~~  391 (398)
T 1kol_A          390 DP  391 (398)
T ss_dssp             CT
T ss_pred             Ee
Confidence            74

>2b5w_A Glucose dehydrogenase; nucleotide binding motif, oxidoreductase; HET: FLC NAP; 1.60A {Haloferax mediterranei} PDB: 2b5v_A* 2vwg_A* 2vwh_A* 2vwp_A* 2vwq_A*

Probab=100.00  E-value=1e-54  Score=399.59  Aligned_cols=327  Identities=19%  Similarity=0.296  Sum_probs=283.7

Q ss_pred             ceeEEEecCCc-eEEEEecCCCCCCCcEEEEEeeeeeCcccHhhhhccccCCccCCC---CcccCccceEEEEEeCCCCC
Q 017868           18 NMAAWLLGVNT-LKIQPFELPSLGPYDVLVRMKAVGICGSDVHYLKTLRCADFVVKE---PMVIGHECAGVIEKVGSEVK   93 (365)
Q Consensus        18 ~~~~~~~~~~~-l~~~~~~~p~~~~~eVlI~v~~~~l~~~D~~~~~g~~~~~~~~~~---p~~~G~e~~G~V~~vG~~v~   93 (365)
                      ||++++.+++. ++++++|.|+|+++||+|||.++++|++|++.+.|.+..   ..+   |.++|||++| |+++|++ +
T Consensus         1 MkA~~~~~~~~~l~~~~~p~P~~~~~eVlVkv~a~gi~~~D~~~~~g~~~~---~~~~~~p~v~G~E~~G-V~~vG~~-~   75 (357)
T 2b5w_A            1 MKAIAVKRGEDRPVVIEKPRPEPESGEALVRTLRVGVCGTDHEVIAGGHGG---FPEGEDHLVLGHEAVG-VVVDPND-T   75 (357)
T ss_dssp             CEEEEEETTCSSCEEEECCCCCCCTTEEEEEEEEEEECHHHHHHHHSCSTT---SCTTCSEEECCSEEEE-EEEECTT-S
T ss_pred             CeEEEEeCCCCceEEEECCCCCCCcCEEEEEEeEEeechhcHHHHcCCCCC---CCCCCCCcccCceeEE-EEEECCC-C
Confidence            68899988776 999999999999999999999999999999999875321   345   8999999999 9999999 9


Q ss_pred             CCCCCCEEEEcCCcC--CCCCccccCCCCCCCCCcccc--ccCCCCcceeeEEeecCCceEECCCCCCcchhccchhhHH
Q 017868           94 TLVPGDRVALEPGIS--CWRCDHCKGGRYNLCPEMKFF--ATPPVHGSLANQVVHPADLCFKLPDNVSLEEGAMCEPLSV  169 (365)
Q Consensus        94 ~~~~Gd~V~~~~~~~--~~~~~~~~~~~~~~~~~~~~~--~~~~~~g~~~~~~~v~~~~~~~iP~~~~~~~a~~~~~~~~  169 (365)
                      +|++||||++.+..+  |++|++|+.+++++|++..+.  +....+|+|+||+++++++++++|++++ ++|++..++.|
T Consensus        76 ~~~vGdrV~~~~~~~~~cg~C~~C~~g~~~~C~~~~~~~~g~~~~~G~~aey~~v~~~~~~~iP~~~~-~~aal~~~~~t  154 (357)
T 2b5w_A           76 ELEEGDIVVPTVRRPPASGTNEYFERDQPDMAPDGMYFERGIVGAHGYMSEFFTSPEKYLVRIPRSQA-ELGFLIEPISI  154 (357)
T ss_dssp             SCCTTCEEEECSEECCTTCCCHHHHTTCGGGCCTTSCEEETTBEECCSCBSEEEEEGGGEEECCGGGS-TTGGGHHHHHH
T ss_pred             CCCCCCEEEECCcCCCCCCCChHHhCcCcccCCCCcccccCccCCCcceeeEEEEchHHeEECCCCcc-hhhhhhchHHH
Confidence            999999999998888  999999999999999988766  4323469999999999999999999999 77766669999


Q ss_pred             HHHHHHhcCCCCC------CEEEEEcCCHHHHHH-HHHHH-HHCCCCeEEEEeCChh---HHHHHHHcCCCEEEeCCCCc
Q 017868          170 GLHACRRANIGPE------TNVLIMGAGPIGLVT-MLGAP-RAFGAPRIVIVDVDDY---RLSVAKEIGADNIVKVSTNL  238 (365)
Q Consensus       170 a~~~~~~~~~~~g------~~vlI~G~g~~G~~a-i~~l~-~~~g~~~vi~v~~~~~---~~~~~~~~g~~~~~~~~~~~  238 (365)
                      ||++++.+++++|      ++|||+|+|++|+++ +| ++ +.+|+++|++++++++   |.++++++|++.+ ++.+  
T Consensus       155 a~~al~~~~~~~g~~~~~~~~VlV~GaG~vG~~a~iq-la~k~~Ga~~Vi~~~~~~~~~~~~~~~~~lGa~~v-~~~~--  230 (357)
T 2b5w_A          155 TEKALEHAYASRSAFDWDPSSAFVLGNGSLGLLTLAM-LKVDDKGYENLYCLGRRDRPDPTIDIIEELDATYV-DSRQ--  230 (357)
T ss_dssp             HHHHHHHHHHTTTTSCCCCCEEEEECCSHHHHHHHHH-HHHCTTCCCEEEEEECCCSSCHHHHHHHHTTCEEE-ETTT--
T ss_pred             HHHHHHhcCCCCCcccCCCCEEEEECCCHHHHHHHHH-HHHHHcCCcEEEEEeCCcccHHHHHHHHHcCCccc-CCCc--
Confidence            9999988889999      999999999999999 99 88 9999976899999888   9999999999988 7643  


Q ss_pred             ccHHHHHHHHHHHhCCCceEEEeCCCCHHHHHHHHHhcccCCEEEEEccCC-CCccccchHh----hhcCcEEEeeccc-
Q 017868          239 QDIAEEVEKIQKAMGTGIDVSFDCAGLNKTMSTALGATCAGGKVCLVGMGH-HEMTVPLTPA----AVREVDVVGVFRY-  312 (365)
Q Consensus       239 ~~~~~~i~~~~~~~~~~~d~vid~~g~~~~~~~~~~~l~~~G~~~~~g~~~-~~~~~~~~~~----~~~~~~i~~~~~~-  312 (365)
                      +++.+ ++++ .  + ++|+|||++|....+..++++++++|+++.+|... ....++...+    ..+++++.+++.. 
T Consensus       231 ~~~~~-i~~~-~--g-g~Dvvid~~g~~~~~~~~~~~l~~~G~iv~~g~~~~~~~~~~~~~~~~~~~~~~~~i~g~~~~~  305 (357)
T 2b5w_A          231 TPVED-VPDV-Y--E-QMDFIYEATGFPKHAIQSVQALAPNGVGALLGVPSDWAFEVDAGAFHREMVLHNKALVGSVNSH  305 (357)
T ss_dssp             SCGGG-HHHH-S--C-CEEEEEECSCCHHHHHHHHHHEEEEEEEEECCCCCCCCCCCCHHHHHHHHHHTTCEEEECCCCC
T ss_pred             cCHHH-HHHh-C--C-CCCEEEECCCChHHHHHHHHHHhcCCEEEEEeCCCCCCceecHHHHhHHHHhCCeEEEEeccCC
Confidence            56666 6655 2  4 99999999998778899999999999999998655 3445555556    7899999998765 


Q ss_pred             CCcHHHHHHHHHcC--CCCCCCceEEEecCChhhHHHHHHHHhcCCCceEEEEeC
Q 017868          313 KNTWPLCLELLRSG--KIDVKPLVTHRFGFSQKEVEEAFETSARGGTAIKVMFNL  365 (365)
Q Consensus       313 ~~~~~~~~~~l~~g--~~~~~~~~~~~~~~~~~~~~~a~~~~~~~~~~gk~vi~~  365 (365)
                      .+.++++++++++|  .+ +.+.++++|+|  +++.+|++.+   ...||+||++
T Consensus       306 ~~~~~~~~~l~~~g~~~~-~~~~i~~~~~l--~~~~~A~~~~---~~~gKvvi~~  354 (357)
T 2b5w_A          306 VEHFEAATVTFTKLPKWF-LEDLVTGVHPL--SEFEAAFDDD---DTTIKTAIEF  354 (357)
T ss_dssp             HHHHHHHHHHHHHSCHHH-HHHHEEEEEEG--GGGGGGGCCS---TTCCEEEEEC
T ss_pred             HHHHHHHHHHHHhCchhh-hhhhcceeecH--HHHHHHHHHh---CCCceEEEEe
Confidence            56799999999999  84 47888899999  9999999987   3578999875

>1uuf_A YAHK, zinc-type alcohol dehydrogenase-like protein YAHK; oxidoreductase, zinc binding, oxydoreductase, metal-binding; 1.76A {Escherichia coli} SCOP: b.35.1.2 c.2.1.1

Probab=100.00  E-value=3.1e-53  Score=390.63  Aligned_cols=333  Identities=20%  Similarity=0.295  Sum_probs=277.2

Q ss_pred             chhcceeEEEecC-CceEEEEecCCCCCCCcEEEEEeeeeeCcccHhhhhccccCCccCCCCcccCccceEEEEEeCCCC
Q 017868           14 GEEVNMAAWLLGV-NTLKIQPFELPSLGPYDVLVRMKAVGICGSDVHYLKTLRCADFVVKEPMVIGHECAGVIEKVGSEV   92 (365)
Q Consensus        14 ~~~~~~~~~~~~~-~~l~~~~~~~p~~~~~eVlI~v~~~~l~~~D~~~~~g~~~~~~~~~~p~~~G~e~~G~V~~vG~~v   92 (365)
                      ..++|++.+..++ +.+++.++|.|+|+++||+|||.++++|++|++.+.|...   ...+|.++|||++|+|+++|++|
T Consensus        19 ~~~~~~a~~~~~~~~~l~~~~~p~P~~~~~eVlVkv~a~gi~~~D~~~~~g~~~---~~~~P~v~GhE~~G~V~~vG~~V   95 (369)
T 1uuf_A           19 AGLKIKAVGAYSAKQPLEPMDITRREPGPNDVKIEIAYCGVCHSDLHQVRSEWA---GTVYPCVPGHEIVGRVVAVGDQV   95 (369)
T ss_dssp             ----CEEEEBSSTTSCCEEEECCCCCCCTTEEEEEEEEEECCHHHHHHHHCTTS---CCCSSBCCCCCEEEEEEEECTTC
T ss_pred             cCceEEEEEEcCCCCCcEEEEecCCCCCCCeEEEEEEEEeecHHHHHHhcCCCC---CCCCCeecccCceEEEEEECCCC
Confidence            3456888887765 7899999999999999999999999999999999887432   13578999999999999999999


Q ss_pred             CCCCCCCEEEEcCCc-CCCCCccccCCCCCCCCCcc--ccc-----cCCCCcceeeEEeecCCceEECCCC-CCcchhcc
Q 017868           93 KTLVPGDRVALEPGI-SCWRCDHCKGGRYNLCPEMK--FFA-----TPPVHGSLANQVVHPADLCFKLPDN-VSLEEGAM  163 (365)
Q Consensus        93 ~~~~~Gd~V~~~~~~-~~~~~~~~~~~~~~~~~~~~--~~~-----~~~~~g~~~~~~~v~~~~~~~iP~~-~~~~~a~~  163 (365)
                      ++|++||||++.+.. .|++|.+|+.+++++|++..  +.+     .....|+|+||+++++++++++|++ +++++|+.
T Consensus        96 ~~~~vGDrV~~~~~~~~Cg~C~~C~~g~~~~C~~~~~~~~~~~~~~g~~~~G~~aeyv~v~~~~~~~~P~~~ls~~~aa~  175 (369)
T 1uuf_A           96 EKYAPGDLVGVGCIVDSCKHCEECEDGLENYCDHMTGTYNSPTPDEPGHTLGGYSQQIVVHERYVLRIRHPQEQLAAVAP  175 (369)
T ss_dssp             CSCCTTCEEEECSEEECCSSSHHHHTTCGGGCTTCEETTTSBCSSTTSBCCCSSBSEEEEEGGGCEECCSCGGGHHHHGG
T ss_pred             CCCCCCCEEEEccCCCCCCCCcccCCCCcccCcchhcccccccccCCCCCCCcccceEEEcchhEEECCCCCCCHHHhhh
Confidence            999999999987654 59999999999999999752  211     1134699999999999999999999 99999887


Q ss_pred             ch-hhHHHHHHHHhcCCCCCCEEEEEcCCHHHHHHHHHHHHHCCCCeEEEEeCChhHHHHHHHcCCCEEEeCCCCcccHH
Q 017868          164 CE-PLSVGLHACRRANIGPETNVLIMGAGPIGLVTMLGAPRAFGAPRIVIVDVDDYRLSVAKEIGADNIVKVSTNLQDIA  242 (365)
Q Consensus       164 ~~-~~~~a~~~~~~~~~~~g~~vlI~G~g~~G~~ai~~l~~~~g~~~vi~v~~~~~~~~~~~~~g~~~~~~~~~~~~~~~  242 (365)
                      ++ ++.|||++++..++++|++|||+|+|++|++++| +++.+|+ .|+++++++++.++++++|++.++++.+  +++ 
T Consensus       176 l~~~~~tA~~al~~~~~~~g~~VlV~GaG~vG~~aiq-lak~~Ga-~Vi~~~~~~~~~~~a~~lGa~~vi~~~~--~~~-  250 (369)
T 1uuf_A          176 LLCAGITTYSPLRHWQAGPGKKVGVVGIGGLGHMGIK-LAHAMGA-HVVAFTTSEAKREAAKALGADEVVNSRN--ADE-  250 (369)
T ss_dssp             GGTHHHHHHHHHHHTTCCTTCEEEEECCSHHHHHHHH-HHHHTTC-EEEEEESSGGGHHHHHHHTCSEEEETTC--HHH-
T ss_pred             hhhhHHHHHHHHHhcCCCCCCEEEEECCCHHHHHHHH-HHHHCCC-EEEEEeCCHHHHHHHHHcCCcEEecccc--HHH-
Confidence            76 7889999998889999999999999999999999 9999999 4888889999999999999999888643  232 


Q ss_pred             HHHHHHHHHhCCCceEEEeCCCCHHHHHHHHHhcccCCEEEEEccCCCCc-cccchHhhhcCcEEEeeccc-CCcHHHHH
Q 017868          243 EEVEKIQKAMGTGIDVSFDCAGLNKTMSTALGATCAGGKVCLVGMGHHEM-TVPLTPAAVREVDVVGVFRY-KNTWPLCL  320 (365)
Q Consensus       243 ~~i~~~~~~~~~~~d~vid~~g~~~~~~~~~~~l~~~G~~~~~g~~~~~~-~~~~~~~~~~~~~i~~~~~~-~~~~~~~~  320 (365)
                        ++++    ..++|+|||++|.+..+..++++++++|+++.+|...... .++...+..+++++.+++.. .+.+++++
T Consensus       251 --~~~~----~~g~Dvvid~~g~~~~~~~~~~~l~~~G~iv~~G~~~~~~~~~~~~~~~~~~~~i~g~~~~~~~~~~~~~  324 (369)
T 1uuf_A          251 --MAAH----LKSFDFILNTVAAPHNLDDFTTLLKRDGTMTLVGAPATPHKSPEVFNLIMKRRAIAGSMIGGIPETQEML  324 (369)
T ss_dssp             --HHTT----TTCEEEEEECCSSCCCHHHHHTTEEEEEEEEECCCC-------CHHHHHTTTCEEEECCSCCHHHHHHHH
T ss_pred             --HHHh----hcCCCEEEECCCCHHHHHHHHHHhccCCEEEEeccCCCCccccCHHHHHhCCcEEEEeecCCHHHHHHHH
Confidence              2222    2589999999997657889999999999999998654433 44555677899999998765 46789999


Q ss_pred             HHHHcCCCCCCCceEEEecCChhhHHHHHHHHhcCCCceEEEEeC
Q 017868          321 ELLRSGKIDVKPLVTHRFGFSQKEVEEAFETSARGGTAIKVMFNL  365 (365)
Q Consensus       321 ~~l~~g~~~~~~~~~~~~~~~~~~~~~a~~~~~~~~~~gk~vi~~  365 (365)
                      +++++|.+  ++.+ +.|+|  +++.+|++.+++++..||+|+++
T Consensus       325 ~l~~~g~i--~~~i-~~~~l--~~~~~A~~~~~~~~~~gKvvi~~  364 (369)
T 1uuf_A          325 DFCAEHGI--VADI-EMIRA--DQINEAYERMLRGDVKYRFVIDN  364 (369)
T ss_dssp             HHHHHHTC--CCCE-EEECG--GGHHHHHHHHHTTCSSSEEEEEG
T ss_pred             HHHHhCCC--Ccce-EEEcH--HHHHHHHHHHHcCCCceEEEEec
Confidence            99999998  4444 56888  99999999999988889999864

>2cf5_A Atccad5, CAD, cinnamyl alcohol dehydrogenase; lignin biosynthesis, metal-binding, NADP, oxidoreductase, zinc; 2.0A {Arabidopsis thaliana} PDB: 2cf6_A*

Probab=100.00  E-value=6.8e-53  Score=387.24  Aligned_cols=331  Identities=21%  Similarity=0.329  Sum_probs=279.5

Q ss_pred             hhcceeEEEecC-CceEEEEecCCCCCCCcEEEEEeeeeeCcccHhhhhccccCCccCCCCcccCccceEEEEEeCCCCC
Q 017868           15 EEVNMAAWLLGV-NTLKIQPFELPSLGPYDVLVRMKAVGICGSDVHYLKTLRCADFVVKEPMVIGHECAGVIEKVGSEVK   93 (365)
Q Consensus        15 ~~~~~~~~~~~~-~~l~~~~~~~p~~~~~eVlI~v~~~~l~~~D~~~~~g~~~~~~~~~~p~~~G~e~~G~V~~vG~~v~   93 (365)
                      +++|++++..++ +.+++.++|.|+|+++||+|||.++++|++|++.+.|....   ..+|.++|||++|+|+++|++|+
T Consensus         7 ~m~~~a~~~~~~~~~l~~~~~~~p~~~~~eVlVkv~a~gi~~~D~~~~~g~~~~---~~~P~v~GhE~~G~V~~vG~~v~   83 (357)
T 2cf5_A            7 ERKTTGWAARDPSGILSPYTYTLRETGPEDVNIRIICCGICHTDLHQTKNDLGM---SNYPMVPGHEVVGEVVEVGSDVS   83 (357)
T ss_dssp             CCEEEEEEECSTTCCEEEEEEECCCCCTTEEEEEEEEEEECHHHHHHHTCTTTC---CCSSBCCCCEEEEEEEEECSSCC
T ss_pred             cceeEEEEEccCCCCcEEEEecCCCCCCCEEEEEEEEEeecchhhhhhcCCCCC---CCCCeecCcceeEEEEEECCCCC
Confidence            456788887765 78999999999999999999999999999999998874321   35789999999999999999999


Q ss_pred             CCCCCCEEEEcCC-cCCCCCccccCCCCCCCCCccccc------cCCCCcceeeEEeecCCceEECCCCCCcchhccch-
Q 017868           94 TLVPGDRVALEPG-ISCWRCDHCKGGRYNLCPEMKFFA------TPPVHGSLANQVVHPADLCFKLPDNVSLEEGAMCE-  165 (365)
Q Consensus        94 ~~~~Gd~V~~~~~-~~~~~~~~~~~~~~~~~~~~~~~~------~~~~~g~~~~~~~v~~~~~~~iP~~~~~~~a~~~~-  165 (365)
                      +|++||||++.+. .+|++|.+|+.+++++|++..+..      ....+|+|+||+++++++++++|+++++++|+.++ 
T Consensus        84 ~~~vGdrV~~~~~~~~Cg~C~~c~~g~~~~C~~~~~~~~~~~~~g~~~~G~~aey~~v~~~~~~~~P~~ls~~~aa~l~~  163 (357)
T 2cf5_A           84 KFTVGDIVGVGCLVGCCGGCSPCERDLEQYCPKKIWSYNDVYINGQPTQGGFAKATVVHQKFVVKIPEGMAVEQAAPLLC  163 (357)
T ss_dssp             SCCTTCEEEECSEEECCSSSHHHHTTCGGGCTTCEETTTSBCTTSCBCCCSSBSCEEEEGGGEEECCSSCCHHHHTGGGT
T ss_pred             CCCCCCEEEEcCCCCCCCCChHHhCcCcccCCCccccccccccCCCCCCCccccEEEechhhEEECcCCCCHHHhhhhhh
Confidence            9999999987543 579999999999999997553321      11256999999999999999999999999998876 


Q ss_pred             hhHHHHHHHHhcCCC-CCCEEEEEcCCHHHHHHHHHHHHHCCCCeEEEEeCChhHHHHHH-HcCCCEEEeCCCCcccHHH
Q 017868          166 PLSVGLHACRRANIG-PETNVLIMGAGPIGLVTMLGAPRAFGAPRIVIVDVDDYRLSVAK-EIGADNIVKVSTNLQDIAE  243 (365)
Q Consensus       166 ~~~~a~~~~~~~~~~-~g~~vlI~G~g~~G~~ai~~l~~~~g~~~vi~v~~~~~~~~~~~-~~g~~~~~~~~~~~~~~~~  243 (365)
                      .+.|||++++..+++ +|++|||+|+|++|++++| +++.+|+ +|+++++++++.+.++ ++|++.++++.+  .   +
T Consensus       164 ~~~ta~~~l~~~~~~~~g~~VlV~GaG~vG~~a~q-lak~~Ga-~Vi~~~~~~~~~~~~~~~lGa~~vi~~~~--~---~  236 (357)
T 2cf5_A          164 AGVTVYSPLSHFGLKQPGLRGGILGLGGVGHMGVK-IAKAMGH-HVTVISSSNKKREEALQDLGADDYVIGSD--Q---A  236 (357)
T ss_dssp             HHHHHHHHHHHTSTTSTTCEEEEECCSHHHHHHHH-HHHHHTC-EEEEEESSTTHHHHHHTTSCCSCEEETTC--H---H
T ss_pred             hHHHHHHHHHhcCCCCCCCEEEEECCCHHHHHHHH-HHHHCCC-eEEEEeCChHHHHHHHHHcCCceeecccc--H---H
Confidence            778999999888888 9999999999999999999 8999999 6888889999998887 999999887642  1   2


Q ss_pred             HHHHHHHHhCCCceEEEeCCCCHHHHHHHHHhcccCCEEEEEccCCCCcc-ccchHhhhcCcEEEeeccc-CCcHHHHHH
Q 017868          244 EVEKIQKAMGTGIDVSFDCAGLNKTMSTALGATCAGGKVCLVGMGHHEMT-VPLTPAAVREVDVVGVFRY-KNTWPLCLE  321 (365)
Q Consensus       244 ~i~~~~~~~~~~~d~vid~~g~~~~~~~~~~~l~~~G~~~~~g~~~~~~~-~~~~~~~~~~~~i~~~~~~-~~~~~~~~~  321 (365)
                      .+++.    ..++|+|||++|....+..++++++++|+++.+|....... ++.. +..+++++.+++.. .+.++++++
T Consensus       237 ~~~~~----~~g~D~vid~~g~~~~~~~~~~~l~~~G~iv~~G~~~~~~~~~~~~-~~~~~~~i~g~~~~~~~~~~~~~~  311 (357)
T 2cf5_A          237 KMSEL----ADSLDYVIDTVPVHHALEPYLSLLKLDGKLILMGVINNPLQFLTPL-LMLGRKVITGSFIGSMKETEEMLE  311 (357)
T ss_dssp             HHHHS----TTTEEEEEECCCSCCCSHHHHTTEEEEEEEEECSCCSSCCCCCHHH-HHHHTCEEEECCSCCHHHHHHHHH
T ss_pred             HHHHh----cCCCCEEEECCCChHHHHHHHHHhccCCEEEEeCCCCCCccccCHH-HHhCccEEEEEccCCHHHHHHHHH
Confidence            34333    24899999999976567899999999999999986543333 4444 77899999998765 467899999


Q ss_pred             HHHcCCCCCCCceEEEecCChhhHHHHHHHHhcCCCceEEEEeC
Q 017868          322 LLRSGKIDVKPLVTHRFGFSQKEVEEAFETSARGGTAIKVMFNL  365 (365)
Q Consensus       322 ~l~~g~~~~~~~~~~~~~~~~~~~~~a~~~~~~~~~~gk~vi~~  365 (365)
                      ++++|++.  +.+ ++|++  +++++|++.+++++..||+|+++
T Consensus       312 l~~~g~l~--~~~-~~~~l--~~~~~A~~~~~~~~~~gKvvi~~  350 (357)
T 2cf5_A          312 FCKEKGLS--SII-EVVKM--DYVNTAFERLEKNDVRYRFVVDV  350 (357)
T ss_dssp             HHHHTTCC--CCE-EEEEG--GGHHHHHHHHHTTCSSSEEEEET
T ss_pred             HHHcCCCC--Cce-EEEeH--HHHHHHHHHHHCCCCceEEEEeC
Confidence            99999994  444 78999  99999999999998899999974

>1yqd_A Sinapyl alcohol dehydrogenase; lignin, monolignol, oxidoreductase, zinc-dependent, plant DE biosynthesis, substrate inhibition; HET: NAP; 1.65A {Populus tremuloides} PDB: 1yqx_A*

Probab=100.00  E-value=2.2e-52  Score=384.91  Aligned_cols=341  Identities=22%  Similarity=0.316  Sum_probs=281.3

Q ss_pred             CCCccccccchhcceeEEEec-CCceEEEEecCCCCCCCcEEEEEeeeeeCcccHhhhhccccCCccCCCCcccCccceE
Q 017868            5 GMSQGEKEDGEEVNMAAWLLG-VNTLKIQPFELPSLGPYDVLVRMKAVGICGSDVHYLKTLRCADFVVKEPMVIGHECAG   83 (365)
Q Consensus         5 ~~~~~~~~~~~~~~~~~~~~~-~~~l~~~~~~~p~~~~~eVlI~v~~~~l~~~D~~~~~g~~~~~~~~~~p~~~G~e~~G   83 (365)
                      +|+...++..+++++++...+ ++.+++.++|.|+|+++||+|||.+++||++|++.+.|....   ..+|.++|||++|
T Consensus         4 ~~~~~~~~~~~mk~~~~~~~~~~~~l~~~~~~~p~~~~~eVlVkv~a~gi~~~D~~~~~g~~~~---~~~P~v~GhE~~G   80 (366)
T 1yqd_A            4 GMSKSPEEEHPVKAFGWAARDQSGHLSPFNFSRRATGEEDVRFKVLYCGVCHSDLHSIKNDWGF---SMYPLVPGHEIVG   80 (366)
T ss_dssp             ----CHHHHSSEEEEEEEECSTTCCEEEEEEEECCCCTTEEEEEEEEEEECHHHHHHHHTSSSC---CCSSBCCCCCEEE
T ss_pred             ccCCCcchhCCeeEEEEEEcCCCCCcEEEEccCCCCCCCeEEEEEEEEeechhhHHHHcCCCCC---CCCCEecccceEE
Confidence            566655555555566666654 468999999999999999999999999999999998874321   3578999999999


Q ss_pred             EEEEeCCCCCCCCCCCEEEEcCC-cCCCCCccccCCCCCCCCCccccc------cCCCCcceeeEEeecCCceEECCCCC
Q 017868           84 VIEKVGSEVKTLVPGDRVALEPG-ISCWRCDHCKGGRYNLCPEMKFFA------TPPVHGSLANQVVHPADLCFKLPDNV  156 (365)
Q Consensus        84 ~V~~vG~~v~~~~~Gd~V~~~~~-~~~~~~~~~~~~~~~~~~~~~~~~------~~~~~g~~~~~~~v~~~~~~~iP~~~  156 (365)
                      +|+++|++|++|++||||++.+. .+|++|.+|+.+++++|+...+..      .....|+|+||+++++++++++|+++
T Consensus        81 ~V~~vG~~V~~~~vGDrV~~~~~~~~Cg~C~~c~~g~~~~C~~~~~~~~~~~~~g~~~~G~~aey~~v~~~~~~~~P~~l  160 (366)
T 1yqd_A           81 EVTEVGSKVKKVNVGDKVGVGCLVGACHSCESCANDLENYCPKMILTYASIYHDGTITYGGYSNHMVANERYIIRFPDNM  160 (366)
T ss_dssp             EEEEECTTCCSCCTTCEEEECSEEECCSSSHHHHTTCGGGCTTCEESSSSBCTTSCBCCCSSBSEEEEEGGGCEECCTTS
T ss_pred             EEEEECCCCCcCCCCCEEEEcCCcCCCCCChhhhCcCcccCCcccccccccccCCCcCCCccccEEEEchhhEEECCCCC
Confidence            99999999999999999987543 589999999999999996543221      11256999999999999999999999


Q ss_pred             Ccchhccch-hhHHHHHHHHhcCCC-CCCEEEEEcCCHHHHHHHHHHHHHCCCCeEEEEeCChhHHHHHH-HcCCCEEEe
Q 017868          157 SLEEGAMCE-PLSVGLHACRRANIG-PETNVLIMGAGPIGLVTMLGAPRAFGAPRIVIVDVDDYRLSVAK-EIGADNIVK  233 (365)
Q Consensus       157 ~~~~a~~~~-~~~~a~~~~~~~~~~-~g~~vlI~G~g~~G~~ai~~l~~~~g~~~vi~v~~~~~~~~~~~-~~g~~~~~~  233 (365)
                      ++++|+.++ .+.|||++++..+++ +|++|||+|+|++|++++| +++.+|+ +|+++++++++.+.++ ++|++.+++
T Consensus       161 s~~~aa~l~~~~~ta~~al~~~~~~~~g~~VlV~GaG~vG~~~~q-~a~~~Ga-~Vi~~~~~~~~~~~~~~~lGa~~v~~  238 (366)
T 1yqd_A          161 PLDGGAPLLCAGITVYSPLKYFGLDEPGKHIGIVGLGGLGHVAVK-FAKAFGS-KVTVISTSPSKKEEALKNFGADSFLV  238 (366)
T ss_dssp             CTTTTGGGGTHHHHHHHHHHHTTCCCTTCEEEEECCSHHHHHHHH-HHHHTTC-EEEEEESCGGGHHHHHHTSCCSEEEE
T ss_pred             CHHHhhhhhhhHHHHHHHHHhcCcCCCCCEEEEECCCHHHHHHHH-HHHHCCC-EEEEEeCCHHHHHHHHHhcCCceEEe
Confidence            999998876 778999999888888 9999999999999999999 8999999 6888888999988876 899999887


Q ss_pred             CCCCcccHHHHHHHHHHHhCCCceEEEeCCCCHHHHHHHHHhcccCCEEEEEccCCCCccccchHhhhcCcEEEeeccc-
Q 017868          234 VSTNLQDIAEEVEKIQKAMGTGIDVSFDCAGLNKTMSTALGATCAGGKVCLVGMGHHEMTVPLTPAAVREVDVVGVFRY-  312 (365)
Q Consensus       234 ~~~~~~~~~~~i~~~~~~~~~~~d~vid~~g~~~~~~~~~~~l~~~G~~~~~g~~~~~~~~~~~~~~~~~~~i~~~~~~-  312 (365)
                      +.+  .   +.+++.    ..++|+|||++|....+..++++++++|+++.+|.......++...+..+++++.+++.. 
T Consensus       239 ~~~--~---~~~~~~----~~~~D~vid~~g~~~~~~~~~~~l~~~G~iv~~g~~~~~~~~~~~~~~~~~~~i~g~~~~~  309 (366)
T 1yqd_A          239 SRD--Q---EQMQAA----AGTLDGIIDTVSAVHPLLPLFGLLKSHGKLILVGAPEKPLELPAFSLIAGRKIVAGSGIGG  309 (366)
T ss_dssp             TTC--H---HHHHHT----TTCEEEEEECCSSCCCSHHHHHHEEEEEEEEECCCCSSCEEECHHHHHTTTCEEEECCSCC
T ss_pred             ccC--H---HHHHHh----hCCCCEEEECCCcHHHHHHHHHHHhcCCEEEEEccCCCCCCcCHHHHHhCCcEEEEecCCC
Confidence            643  1   234333    248999999999765678899999999999999875544445556678899999998765 


Q ss_pred             CCcHHHHHHHHHcCCCCCCCceEEEecCChhhHHHHHHHHhcCCCceEEEEe
Q 017868          313 KNTWPLCLELLRSGKIDVKPLVTHRFGFSQKEVEEAFETSARGGTAIKVMFN  364 (365)
Q Consensus       313 ~~~~~~~~~~l~~g~~~~~~~~~~~~~~~~~~~~~a~~~~~~~~~~gk~vi~  364 (365)
                      .+.+.++++++++|.+.  +.+ ++|+|  +++.+|++.+++++..||+|++
T Consensus       310 ~~~~~~~~~l~~~g~l~--~~~-~~~~l--~~~~~A~~~~~~~~~~gKvvl~  356 (366)
T 1yqd_A          310 MKETQEMIDFAAKHNIT--ADI-EVIST--DYLNTAMERLAKNDVRYRFVID  356 (366)
T ss_dssp             HHHHHHHHHHHHHTTCC--CCE-EEECG--GGHHHHHHHHHTTCCSSEEEEC
T ss_pred             HHHHHHHHHHHHcCCCC--Cce-EEEcH--HHHHHHHHHHHcCCcceEEEEE
Confidence            45789999999999994  444 68888  9999999999999889999986

>3krt_A Crotonyl COA reductase; structural genomics, protein structure initiative, NYSGXRC, PSI-2; 2.19A {Streptomyces coelicolor} PDB: 3hzz_A

Probab=100.00  E-value=6.6e-52  Score=392.42  Aligned_cols=344  Identities=21%  Similarity=0.211  Sum_probs=290.7

Q ss_pred             ccchhcceeEEEecC----------------CceEEEEecCCCCCCCcEEEEEeeeeeCcccHhhhhcccc---------
Q 017868           12 EDGEEVNMAAWLLGV----------------NTLKIQPFELPSLGPYDVLVRMKAVGICGSDVHYLKTLRC---------   66 (365)
Q Consensus        12 ~~~~~~~~~~~~~~~----------------~~l~~~~~~~p~~~~~eVlI~v~~~~l~~~D~~~~~g~~~---------   66 (365)
                      +..+.+|+|+++.++                +.++++++|.|+|+++||+|||.+++||++|++...+...         
T Consensus        25 ~~iP~tmkA~v~~~~~~~~~~~~~~~~~~~~~~l~~~e~p~P~~~~~eVlVkV~a~gic~sD~~~~~~~~~~~~~~~~~~  104 (456)
T 3krt_A           25 LPLPESYRAITVHKDETEMFAGLETRDKDPRKSIHLDDVPVPELGPGEALVAVMASSVNYNSVHTSIFEPLSTFGFLERY  104 (456)
T ss_dssp             SCCCSCEEEEEEEGGGTTTTTTCCGGGCCHHHHCEEEEECCCCCCTTEEEEEEEEEEECHHHHHHHTTCSSCSHHHHHHH
T ss_pred             CCCCcceEEEEEeccccccccccccccCCCCCCcEEEEccCCCCCCCeEEEEEEEEEecchhhhhhhcCcccchhhhhhc
Confidence            346788999999975                5899999999999999999999999999999876432110         


Q ss_pred             ---CCc--cCCCC-cccCccceEEEEEeCCCCCCCCCCCEEEEcCCcCCCCCccccCCCCCCCCCccccccCCCCcceee
Q 017868           67 ---ADF--VVKEP-MVIGHECAGVIEKVGSEVKTLVPGDRVALEPGISCWRCDHCKGGRYNLCPEMKFFATPPVHGSLAN  140 (365)
Q Consensus        67 ---~~~--~~~~p-~~~G~e~~G~V~~vG~~v~~~~~Gd~V~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~  140 (365)
                         +.+  ...+| .++|||++|+|+++|++|++|++||||++.+. .|+.|..|..+..++|++...++....+|+|+|
T Consensus       105 g~~~~~~~~~~~P~~v~GhE~~G~Vv~vG~~v~~~~vGdrV~~~~~-~c~~~~~~~~~~~~~c~~~~~~G~~~~~G~~ae  183 (456)
T 3krt_A          105 GRVSDLAKRHDLPYHVIGSDLAGVVLRTGPGVNAWQAGDEVVAHCL-SVELESSDGHNDTMLDPEQRIWGFETNFGGLAE  183 (456)
T ss_dssp             HTSCHHHHTTCCSEEECCSCCEEEEEEECTTCCSCCTTCEEEECCE-ECCCCSGGGTTSGGGCTTCEETTTTSSSCSSBS
T ss_pred             cccccccccCCCCcccccceeEEEEEEECCCCCCCCCCCEEEEeCC-cccccccccccccccCccccccccCCCCCcccc
Confidence               000  12456 68999999999999999999999999999654 688899999999999999999888666799999


Q ss_pred             EEeecCCceEECCCCCCcchhccch-hhHHHHHHHHh---cCCCCCCEEEEEcC-CHHHHHHHHHHHHHCCCCeEEEEeC
Q 017868          141 QVVHPADLCFKLPDNVSLEEGAMCE-PLSVGLHACRR---ANIGPETNVLIMGA-GPIGLVTMLGAPRAFGAPRIVIVDV  215 (365)
Q Consensus       141 ~~~v~~~~~~~iP~~~~~~~a~~~~-~~~~a~~~~~~---~~~~~g~~vlI~G~-g~~G~~ai~~l~~~~g~~~vi~v~~  215 (365)
                      |+++++++++++|+++++++|+.++ ++.|||+++..   +++++|++|||+|+ |++|++++| +++..|+ .++++++
T Consensus       184 y~~v~~~~~~~~P~~l~~~~aa~l~~~~~ta~~al~~~~~~~~~~g~~VlV~GasG~vG~~avq-lak~~Ga-~vi~~~~  261 (456)
T 3krt_A          184 IALVKSNQLMPKPDHLSWEEAAAPGLVNSTAYRQLVSRNGAGMKQGDNVLIWGASGGLGSYATQ-FALAGGA-NPICVVS  261 (456)
T ss_dssp             EEEEEGGGEEECCTTSCHHHHHSSHHHHHHHHHHHTSTTTTCCCTTCEEEETTTTSHHHHHHHH-HHHHTTC-EEEEEES
T ss_pred             eEEechHHeeECCCCCCHHHHHHhhhHHHHHHHHHHhhcccCCCCCCEEEEECCCCHHHHHHHH-HHHHcCC-eEEEEEC
Confidence            9999999999999999999999886 78899999842   78999999999998 999999999 9999999 5677778


Q ss_pred             ChhHHHHHHHcCCCEEEeCCCCcc---------------cHHHHHHHHHHHhCCCceEEEeCCCCHHHHHHHHHhcccCC
Q 017868          216 DDYRLSVAKEIGADNIVKVSTNLQ---------------DIAEEVEKIQKAMGTGIDVSFDCAGLNKTMSTALGATCAGG  280 (365)
Q Consensus       216 ~~~~~~~~~~~g~~~~~~~~~~~~---------------~~~~~i~~~~~~~~~~~d~vid~~g~~~~~~~~~~~l~~~G  280 (365)
                      +++|.++++++|++.++++...+.               ++.+.+++++  .+.++|+|||++|. ..+..++++++++|
T Consensus       262 ~~~~~~~~~~lGa~~vi~~~~~d~~~~~~~~~~~~~~~~~~~~~i~~~t--~g~g~Dvvid~~G~-~~~~~~~~~l~~~G  338 (456)
T 3krt_A          262 SPQKAEICRAMGAEAIIDRNAEGYRFWKDENTQDPKEWKRFGKRIRELT--GGEDIDIVFEHPGR-ETFGASVFVTRKGG  338 (456)
T ss_dssp             SHHHHHHHHHHTCCEEEETTTTTCCSEEETTEECHHHHHHHHHHHHHHH--TSCCEEEEEECSCH-HHHHHHHHHEEEEE
T ss_pred             CHHHHHHHHhhCCcEEEecCcCcccccccccccchHHHHHHHHHHHHHh--CCCCCcEEEEcCCc-hhHHHHHHHhhCCc
Confidence            999999999999999998754321               1235555543  26799999999997 68899999999999


Q ss_pred             EEEEEccCCC-CccccchHhhhcCcEEEeeccc-CCcHHHHHHHHHcCCCCCCCceEEEecCChhhHHHHHHHHhcCCCc
Q 017868          281 KVCLVGMGHH-EMTVPLTPAAVREVDVVGVFRY-KNTWPLCLELLRSGKIDVKPLVTHRFGFSQKEVEEAFETSARGGTA  358 (365)
Q Consensus       281 ~~~~~g~~~~-~~~~~~~~~~~~~~~i~~~~~~-~~~~~~~~~~l~~g~~~~~~~~~~~~~~~~~~~~~a~~~~~~~~~~  358 (365)
                      +++.+|.... ...++...+..+.+++.+++.. .+.+.++++++++|.+  ++.++++|+|  +++.+|++.+.+++..
T Consensus       339 ~iv~~G~~~~~~~~~~~~~~~~~~~~i~g~~~~~~~~~~~~~~l~~~g~l--~~~i~~~~~l--~~~~eA~~~l~~~~~~  414 (456)
T 3krt_A          339 TITTCASTSGYMHEYDNRYLWMSLKRIIGSHFANYREAWEANRLIAKGRI--HPTLSKVYSL--EDTGQAAYDVHRNLHQ  414 (456)
T ss_dssp             EEEESCCTTCSEEEEEHHHHHHTTCEEEECCSCCHHHHHHHHHHHHTTSS--CCCEEEEEEG--GGHHHHHHHHHTTCSS
T ss_pred             EEEEEecCCCcccccCHHHHHhcCeEEEEeccCCHHHHHHHHHHHHcCCc--ccceeEEEcH--HHHHHHHHHHHhCCCC
Confidence            9999986543 3355566678899999998765 4557789999999999  6788999999  9999999999999999


Q ss_pred             eEEEEeC
Q 017868          359 IKVMFNL  365 (365)
Q Consensus       359 gk~vi~~  365 (365)
                      ||+||.+
T Consensus       415 GKvvv~~  421 (456)
T 3krt_A          415 GKVGVLC  421 (456)
T ss_dssp             SEEEEES
T ss_pred             CcEEEEe
Confidence            9999863

>4a0s_A Octenoyl-COA reductase/carboxylase; oxidoreductase, transferase, cinnabaramide PKS biosynthesis; HET: CO8 NAP; 1.90A {Streptomyces SP} PDB: 4a10_A

Probab=100.00  E-value=2.3e-51  Score=388.25  Aligned_cols=343  Identities=21%  Similarity=0.251  Sum_probs=287.4

Q ss_pred             cccchhcceeEEEecCC--------------ceEEEEecCCCCCCCcEEEEEeeeeeCcccHhhhh-------------c
Q 017868           11 KEDGEEVNMAAWLLGVN--------------TLKIQPFELPSLGPYDVLVRMKAVGICGSDVHYLK-------------T   63 (365)
Q Consensus        11 ~~~~~~~~~~~~~~~~~--------------~l~~~~~~~p~~~~~eVlI~v~~~~l~~~D~~~~~-------------g   63 (365)
                      ...++.+|+++++..++              .++++++|.|+|+++||+|||.+++||++|++...             +
T Consensus        18 ~~~~p~tmkA~v~~~~~~~~~~~~~~~~~~~~l~~~e~p~P~~~~~eVlVrV~a~gic~sD~~~~~~~~~~~~~~~~~~~   97 (447)
T 4a0s_A           18 AAPVPDTYLALHLRAEDADMFKGVADKDVRKSLRLGEVPMPELAPDEVLVAVMASSINYNTVWSAMFEPIPTFHFLKQNA   97 (447)
T ss_dssp             HSCCCSEEEEEEEEGGGTTTTTTCSSCCHHHHCEEEEEECCCCCTTEEEEEEEEEECCHHHHHHHTTCSSCHHHHHHHHH
T ss_pred             ccCCChhheeeeeeccccccccccccCCCCCCceEEeccCCCCCCCeEEEEEEEEEECcHHhhhhccCcccchhhhhhhc
Confidence            55678899999999876              89999999999999999999999999999985432             1


Q ss_pred             cccCCc--cCCCC-cccCccceEEEEEeCCCCCCCCCCCEEEEcCCcCCCCCccccCCCCCCCCCccccccCCCCcceee
Q 017868           64 LRCADF--VVKEP-MVIGHECAGVIEKVGSEVKTLVPGDRVALEPGISCWRCDHCKGGRYNLCPEMKFFATPPVHGSLAN  140 (365)
Q Consensus        64 ~~~~~~--~~~~p-~~~G~e~~G~V~~vG~~v~~~~~Gd~V~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~  140 (365)
                      .. +.+  ...+| .++|||++|+|+++|++|++|++||||++.+...|+.|+.| .+..++|.+..+.|....+|+|+|
T Consensus        98 ~~-g~~~~~~~~P~~v~GhE~~G~V~~vG~~V~~~~vGDrV~~~~~~~~~~~~~~-~~~~~~c~~~~~~G~~~~~G~~ae  175 (447)
T 4a0s_A           98 RQ-GGWATRHDQPYHVLGSDCSGVVVRTGIGVRRWKPGDHVIVHPAHVDEQEPAT-HGDGMLGTEQRAWGFETNFGGLAE  175 (447)
T ss_dssp             TT-CGGGGGGCCSEEECCSCEEEEEEEECTTCCSCCTTCEEEECSEECCTTSGGG-GTCTTCSTTCEETTTTSSSCSSBS
T ss_pred             cc-CccccccCCCCcccccceeEEEEEECCCCCCCCCCCEEEEecCcCcCccccc-ccccccccccccccccCCCCceee
Confidence            11 111  12456 69999999999999999999999999999988888877654 567899999988887656799999


Q ss_pred             EEeecCCceEECCCCCCcchhccch-hhHHHHHHHH---hcCCCCCCEEEEEcC-CHHHHHHHHHHHHHCCCCeEEEEeC
Q 017868          141 QVVHPADLCFKLPDNVSLEEGAMCE-PLSVGLHACR---RANIGPETNVLIMGA-GPIGLVTMLGAPRAFGAPRIVIVDV  215 (365)
Q Consensus       141 ~~~v~~~~~~~iP~~~~~~~a~~~~-~~~~a~~~~~---~~~~~~g~~vlI~G~-g~~G~~ai~~l~~~~g~~~vi~v~~  215 (365)
                      |+++++++++++|+++++++|+.++ ++.|||+++.   .+++++|++|||+|+ |++|++++| +++..|+ .++++++
T Consensus       176 y~~v~~~~~~~iP~~ls~~~aA~l~~~~~tA~~al~~~~~~~~~~g~~VlV~GasG~iG~~a~q-la~~~Ga-~vi~~~~  253 (447)
T 4a0s_A          176 YGVVRASQLLPKPAHLTWEEAAVSPLCAGTAYRMLVSDRGAQMKQGDIVLIWGASGGLGSYAIQ-FVKNGGG-IPVAVVS  253 (447)
T ss_dssp             EEEEEGGGEEECCTTSCHHHHHTSHHHHHHHHHHHTSTTTTCCCTTCEEEETTTTSHHHHHHHH-HHHHTTC-EEEEEES
T ss_pred             eeecCHHHcEECCCCCCHHHHHHhHHHHHHHHHHHHhhhccCCCCCCEEEEECCCCHHHHHHHH-HHHHcCC-EEEEEeC
Confidence            9999999999999999999999886 7789999983   488999999999998 999999999 9999999 5677778


Q ss_pred             ChhHHHHHHHcCCCEEEeCCCCc----------------ccHHHHHHHHHHHhCCCceEEEeCCCCHHHHHHHHHhcccC
Q 017868          216 DDYRLSVAKEIGADNIVKVSTNL----------------QDIAEEVEKIQKAMGTGIDVSFDCAGLNKTMSTALGATCAG  279 (365)
Q Consensus       216 ~~~~~~~~~~~g~~~~~~~~~~~----------------~~~~~~i~~~~~~~~~~~d~vid~~g~~~~~~~~~~~l~~~  279 (365)
                      ++++.++++++|++.++++...+                ..+.+.+++.   .+.++|++||++|.. .+..++.+++++
T Consensus       254 ~~~~~~~~~~lGa~~~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~---~g~g~Dvvid~~G~~-~~~~~~~~l~~~  329 (447)
T 4a0s_A          254 SAQKEAAVRALGCDLVINRAELGITDDIADDPRRVVETGRKLAKLVVEK---AGREPDIVFEHTGRV-TFGLSVIVARRG  329 (447)
T ss_dssp             SHHHHHHHHHTTCCCEEEHHHHTCCTTGGGCHHHHHHHHHHHHHHHHHH---HSSCCSEEEECSCHH-HHHHHHHHSCTT
T ss_pred             CHHHHHHHHhcCCCEEEecccccccccccccccccchhhhHHHHHHHHH---hCCCceEEEECCCch-HHHHHHHHHhcC
Confidence            99999999999999888753211                0113444443   367999999999974 788999999999


Q ss_pred             CEEEEEccCCC-CccccchHhhhcCcEEEeeccc-CCcHHHHHHHHHcCCCCCCCceEEEecCChhhHHHHHHHHhcCCC
Q 017868          280 GKVCLVGMGHH-EMTVPLTPAAVREVDVVGVFRY-KNTWPLCLELLRSGKIDVKPLVTHRFGFSQKEVEEAFETSARGGT  357 (365)
Q Consensus       280 G~~~~~g~~~~-~~~~~~~~~~~~~~~i~~~~~~-~~~~~~~~~~l~~g~~~~~~~~~~~~~~~~~~~~~a~~~~~~~~~  357 (365)
                      |+++.+|.... ...++...+..+.+++.+++.. .+.+.++++++++|.+  ++.++++|+|  +++.+|++.+.+++.
T Consensus       330 G~iv~~G~~~~~~~~~~~~~~~~~~~~i~g~~~~~~~~~~~~~~l~~~g~l--~~~i~~~~~l--~~~~~A~~~~~~~~~  405 (447)
T 4a0s_A          330 GTVVTCGSSSGYLHTFDNRYLWMKLKKIVGSHGANHEEQQATNRLFESGAV--VPAMSAVYPL--AEAAEACRVVQTSRQ  405 (447)
T ss_dssp             CEEEESCCTTCSEEEEEHHHHHHTTCEEEECCSCCHHHHHHHHHHHHTTSS--CCCEEEEEEG--GGHHHHHHHHHTTCC
T ss_pred             CEEEEEecCCCcccccCHHHHHhCCCEEEecCCCCHHHHHHHHHHHHcCCc--ccceeEEEcH--HHHHHHHHHHhcCCC
Confidence            99999986543 3345566678899999998766 3567899999999999  6788999999  999999999999999


Q ss_pred             ceEEEEeC
Q 017868          358 AIKVMFNL  365 (365)
Q Consensus       358 ~gk~vi~~  365 (365)
                      .||+||.+
T Consensus       406 ~GKvvv~~  413 (447)
T 4a0s_A          406 VGKVAVLC  413 (447)
T ss_dssp             SSEEEEES
T ss_pred             ceEEEEEe
Confidence            99998863

>4dup_A Quinone oxidoreductase; PSI-biology, structural genomics, protein structure initiati structural genomics research consortium, nysgrc; 2.45A {Rhizobium etli}

Probab=100.00  E-value=2.5e-50  Score=369.62  Aligned_cols=313  Identities=22%  Similarity=0.302  Sum_probs=273.0

Q ss_pred             cccchhcceeEEEec---CCceEEEEecCCCCCCCcEEEEEeeeeeCcccHhhhhccccCCccCCCCcccCccceEEEEE
Q 017868           11 KEDGEEVNMAAWLLG---VNTLKIQPFELPSLGPYDVLVRMKAVGICGSDVHYLKTLRCADFVVKEPMVIGHECAGVIEK   87 (365)
Q Consensus        11 ~~~~~~~~~~~~~~~---~~~l~~~~~~~p~~~~~eVlI~v~~~~l~~~D~~~~~g~~~~~~~~~~p~~~G~e~~G~V~~   87 (365)
                      ++.++.+||++++.+   ++.+++.++|.|+|+++||+|||.+++||++|++.+.|.+..  ...+|.++|||++|+|++
T Consensus        22 ~~~~p~~MkA~~~~~~g~~~~l~~~~~~~P~~~~~eVlVkv~a~gi~~~D~~~~~g~~~~--~~~~p~i~G~E~~G~V~~   99 (353)
T 4dup_A           22 SMSLPQEMRFVDLKSFGGPDVMVIGKRPLPVAGEGEVLVRAEAIGVNRPDIAQRQGSYPP--PKDASPILGLELSGEIVG   99 (353)
T ss_dssp             -CCCCSSEEEEEESSSSSGGGEEEEEECCCCCCTTEEEEEEEEEEECHHHHHHHTTSSCC--CTTSCSSSCCEEEEEEEE
T ss_pred             cCCCChheeEEEEccCCCccceEEEeccCCCCCCCEEEEEEEEEecCHHHHHHhCCCCCC--CCCCCCccccccEEEEEE
Confidence            345778899999986   457999999999999999999999999999999998875432  235689999999999999


Q ss_pred             eCCCCCCCCCCCEEEEcCCcCCCCCccccCCCCCCCCCccccccCCCCcceeeEEeecCCceEECCCCCCcchhccch-h
Q 017868           88 VGSEVKTLVPGDRVALEPGISCWRCDHCKGGRYNLCPEMKFFATPPVHGSLANQVVHPADLCFKLPDNVSLEEGAMCE-P  166 (365)
Q Consensus        88 vG~~v~~~~~Gd~V~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~v~~~~~~~iP~~~~~~~a~~~~-~  166 (365)
                      +|++|++|++||||+++.                            ..|+|+||++++++.++++|+++++++|+.++ +
T Consensus       100 vG~~v~~~~vGdrV~~~~----------------------------~~G~~aey~~v~~~~~~~~P~~~~~~~aa~l~~~  151 (353)
T 4dup_A          100 VGPGVSGYAVGDKVCGLA----------------------------NGGAYAEYCLLPAGQILPFPKGYDAVKAAALPET  151 (353)
T ss_dssp             ECTTCCSCCTTCEEEEEC----------------------------SSCCSBSEEEEEGGGEEECCTTCCHHHHHTSHHH
T ss_pred             ECCCCCCCCCCCEEEEec----------------------------CCCceeeEEEEcHHHcEeCCCCCCHHHHhhhhhH
Confidence            999999999999998752                            35999999999999999999999999998775 8


Q ss_pred             hHHHHHHH-HhcCCCCCCEEEEEc-CCHHHHHHHHHHHHHCCCCeEEEEeCChhHHHHHHHcCCCEEEeCCCCcccHHHH
Q 017868          167 LSVGLHAC-RRANIGPETNVLIMG-AGPIGLVTMLGAPRAFGAPRIVIVDVDDYRLSVAKEIGADNIVKVSTNLQDIAEE  244 (365)
Q Consensus       167 ~~~a~~~~-~~~~~~~g~~vlI~G-~g~~G~~ai~~l~~~~g~~~vi~v~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~  244 (365)
                      +.|||+++ +.+++++|++|||+| +|++|++++| +++..|+ +|+++++++++.++++++|++.++++..  +++.+.
T Consensus       152 ~~ta~~~l~~~~~~~~g~~VlV~Gg~g~iG~~~~~-~a~~~Ga-~Vi~~~~~~~~~~~~~~lGa~~~~~~~~--~~~~~~  227 (353)
T 4dup_A          152 FFTVWANLFQMAGLTEGESVLIHGGTSGIGTTAIQ-LARAFGA-EVYATAGSTGKCEACERLGAKRGINYRS--EDFAAV  227 (353)
T ss_dssp             HHHHHHHHTTTTCCCTTCEEEESSTTSHHHHHHHH-HHHHTTC-EEEEEESSHHHHHHHHHHTCSEEEETTT--SCHHHH
T ss_pred             HHHHHHHHHHhcCCCCCCEEEEEcCCCHHHHHHHH-HHHHcCC-EEEEEeCCHHHHHHHHhcCCCEEEeCCc--hHHHHH
Confidence            99999998 678999999999996 4999999999 8899999 6889999999999999999999988643  677777


Q ss_pred             HHHHHHHhCCCceEEEeCCCCHHHHHHHHHhcccCCEEEEEccCCCC-cc-ccchHhhhcCcEEEeecccC-Cc------
Q 017868          245 VEKIQKAMGTGIDVSFDCAGLNKTMSTALGATCAGGKVCLVGMGHHE-MT-VPLTPAAVREVDVVGVFRYK-NT------  315 (365)
Q Consensus       245 i~~~~~~~~~~~d~vid~~g~~~~~~~~~~~l~~~G~~~~~g~~~~~-~~-~~~~~~~~~~~~i~~~~~~~-~~------  315 (365)
                      +++.+   +.++|++|||+|.. .+..++++|+++|+++.+|..... .. ++...+..+++++.++.... ..      
T Consensus       228 ~~~~~---~~g~Dvvid~~g~~-~~~~~~~~l~~~G~iv~~g~~~~~~~~~~~~~~~~~~~~~i~g~~~~~~~~~~~~~~  303 (353)
T 4dup_A          228 IKAET---GQGVDIILDMIGAA-YFERNIASLAKDGCLSIIAFLGGAVAEKVNLSPIMVKRLTVTGSTMRPRTAEEKRAI  303 (353)
T ss_dssp             HHHHH---SSCEEEEEESCCGG-GHHHHHHTEEEEEEEEECCCTTCSEEEEEECHHHHHTTCEEEECCSTTSCHHHHHHH
T ss_pred             HHHHh---CCCceEEEECCCHH-HHHHHHHHhccCCEEEEEEecCCCcccCCCHHHHHhcCceEEEEeccccchhhhHHH
Confidence            77664   67999999999975 788999999999999999865433 23 66677888999999987652 21      


Q ss_pred             ----HHHHHHHHHcCCCCCCCceEEEecCChhhHHHHHHHHhcCCCceEEEEeC
Q 017868          316 ----WPLCLELLRSGKIDVKPLVTHRFGFSQKEVEEAFETSARGGTAIKVMFNL  365 (365)
Q Consensus       316 ----~~~~~~~l~~g~~~~~~~~~~~~~~~~~~~~~a~~~~~~~~~~gk~vi~~  365 (365)
                          ++++++++++|++  ++.++++|++  +++.+|++.+++++..||+||++
T Consensus       304 ~~~~~~~~~~l~~~g~l--~~~i~~~~~l--~~~~~A~~~l~~~~~~gKvvl~~  353 (353)
T 4dup_A          304 RDDLLSEVWPLLEAGTV--APVIHKVFAF--EDVADAHRLLEEGSHVGKVMLTV  353 (353)
T ss_dssp             HHHHHHHTHHHHHHTSS--CCCEEEEEEG--GGHHHHHHHHHHTCCSSEEEEEC
T ss_pred             HHHHHHHHHHHHHCCCc--cCCcceEEeH--HHHHHHHHHHHhCCCCceEEEeC
Confidence                7789999999998  7888999999  99999999999999999999985

>2cdc_A Glucose dehydrogenase glucose 1-dehydrogenase, DHG-1; reductase, oxidoreductase, MDR family; HET: XYS XYP NAP; 1.50A {Sulfolobus solfataricus} PDB: 2cdb_A* 2cd9_A 2cda_A*

Probab=100.00  E-value=5.5e-52  Score=382.62  Aligned_cols=328  Identities=20%  Similarity=0.314  Sum_probs=278.8

Q ss_pred             ceeEEEecCCc-eEEEEecCCCCCC-CcEEEEEeeeeeCcccHhhhhc--cccCCccCCC---CcccCccceEEEEEeCC
Q 017868           18 NMAAWLLGVNT-LKIQPFELPSLGP-YDVLVRMKAVGICGSDVHYLKT--LRCADFVVKE---PMVIGHECAGVIEKVGS   90 (365)
Q Consensus        18 ~~~~~~~~~~~-l~~~~~~~p~~~~-~eVlI~v~~~~l~~~D~~~~~g--~~~~~~~~~~---p~~~G~e~~G~V~~vG~   90 (365)
                      ||++++.+++. +++.++|.|+|++ +||+|||.++++|++|++.+.|  .+.   ...+   |.++|||++|+|++  +
T Consensus         1 MkA~~~~~~g~~l~~~~~~~P~~~~~~eVlVkv~a~gi~~~D~~~~~g~~~~~---~~~~~~~p~v~G~E~~G~V~~--~   75 (366)
T 2cdc_A            1 MKAIIVKPPNAGVQVKDVDEKKLDSYGKIKIRTIYNGICGADREIVNGKLTLS---TLPKGKDFLVLGHEAIGVVEE--S   75 (366)
T ss_dssp             CEEEEECTTSCCCEEEECCGGGSCCCSSEEEEEEEEEECHHHHHHHTTCC----------CCSCEECCSEEEEEECS--C
T ss_pred             CeEEEEeCCCCceEEEECcCCCCCCCCEEEEEEEEEeeccccHHHHcCCCCCC---CCCcCCCCCcCCcceEEEEEe--C
Confidence            68888887765 9999999999999 9999999999999999999887  322   1345   89999999999999  6


Q ss_pred             CCCCCCCCCEEEEcCCcCCCCCccccCCCCCCCCCcccc--ccCCCCcceeeEEeecCCceEECCCCCCcchhccchhhH
Q 017868           91 EVKTLVPGDRVALEPGISCWRCDHCKGGRYNLCPEMKFF--ATPPVHGSLANQVVHPADLCFKLPDNVSLEEGAMCEPLS  168 (365)
Q Consensus        91 ~v~~~~~Gd~V~~~~~~~~~~~~~~~~~~~~~~~~~~~~--~~~~~~g~~~~~~~v~~~~~~~iP~~~~~~~a~~~~~~~  168 (365)
                      + ++|++||||++.+..+|++|++|+.+++++|++....  +....+|+|+||+++++++++++|++++ ++|++..++.
T Consensus        76 ~-~~~~~GDrV~~~~~~~cg~C~~C~~g~~~~C~~~~~~~~g~~~~~G~~aey~~v~~~~~~~iP~~l~-~~Aal~~~~~  153 (366)
T 2cdc_A           76 Y-HGFSQGDLVMPVNRRGCGICRNCLVGRPDFCETGEFGEAGIHKMDGFMREWWYDDPKYLVKIPKSIE-DIGILAQPLA  153 (366)
T ss_dssp             C-SSCCTTCEEEECSEECCSSSHHHHTTCGGGCSSSCCEEETTBEECCSCBSEEEECGGGEEEECGGGT-TTGGGHHHHH
T ss_pred             C-CCCCCCCEEEEcCCCCCCCChhhhCcCcccCCCCCcccCCccCCCCceeEEEEechHHeEECcCCcc-hhhhhcCcHH
Confidence            7 8899999999999999999999999999999987665  4322469999999999999999999999 8887666999


Q ss_pred             HHHHHHH-----hcCCC--C-------CCEEEEEcCCHHHHHHHHHHHHHCCCCeEEEEeCCh---hHHHHHHHcCCCEE
Q 017868          169 VGLHACR-----RANIG--P-------ETNVLIMGAGPIGLVTMLGAPRAFGAPRIVIVDVDD---YRLSVAKEIGADNI  231 (365)
Q Consensus       169 ~a~~~~~-----~~~~~--~-------g~~vlI~G~g~~G~~ai~~l~~~~g~~~vi~v~~~~---~~~~~~~~~g~~~~  231 (365)
                      |||++++     .++++  +       |++|||+|+|++|++++| +++..|+ +|+++++++   ++.++++++|++.+
T Consensus       154 ta~~al~~~~~~~~~~~~~~~~~~~~~g~~VlV~GaG~vG~~~~q-~a~~~Ga-~Vi~~~~~~~~~~~~~~~~~~ga~~v  231 (366)
T 2cdc_A          154 DIEKSIEEILEVQKRVPVWTCDDGTLNCRKVLVVGTGPIGVLFTL-LFRTYGL-EVWMANRREPTEVEQTVIEETKTNYY  231 (366)
T ss_dssp             HHHHHHHHHHHHGGGSSCCSCTTSSSTTCEEEEESCHHHHHHHHH-HHHHHTC-EEEEEESSCCCHHHHHHHHHHTCEEE
T ss_pred             HHHHHHHhhhhcccCccccccccccCCCCEEEEECCCHHHHHHHH-HHHhCCC-EEEEEeCCccchHHHHHHHHhCCcee
Confidence            9999997     78888  8       999999999999999999 8889999 788898888   89999999999877


Q ss_pred             EeCCCCcccHHHHHHHHHHHhCCCceEEEeCCCCHHHH-HHHHHhcccCCEEEEEccCCCC-ccccchH---hhhcCcEE
Q 017868          232 VKVSTNLQDIAEEVEKIQKAMGTGIDVSFDCAGLNKTM-STALGATCAGGKVCLVGMGHHE-MTVPLTP---AAVREVDV  306 (365)
Q Consensus       232 ~~~~~~~~~~~~~i~~~~~~~~~~~d~vid~~g~~~~~-~~~~~~l~~~G~~~~~g~~~~~-~~~~~~~---~~~~~~~i  306 (365)
                       + .+   ++.+.+++ +   +.++|++||++|....+ ..++++|+++|+++.+|..... ..++...   +..+++++
T Consensus       232 -~-~~---~~~~~~~~-~---~~~~d~vid~~g~~~~~~~~~~~~l~~~G~iv~~g~~~~~~~~~~~~~~~~~~~~~~~i  302 (366)
T 2cdc_A          232 -N-SS---NGYDKLKD-S---VGKFDVIIDATGADVNILGNVIPLLGRNGVLGLFGFSTSGSVPLDYKTLQEIVHTNKTI  302 (366)
T ss_dssp             -E-CT---TCSHHHHH-H---HCCEEEEEECCCCCTHHHHHHGGGEEEEEEEEECSCCCSCEEEEEHHHHHHHHHTTCEE
T ss_pred             -c-hH---HHHHHHHH-h---CCCCCEEEECCCChHHHHHHHHHHHhcCCEEEEEecCCCCccccChhhhHHHHhcCcEE
Confidence             5 32   56566665 3   26899999999986677 8999999999999999865443 4455555   78899999


Q ss_pred             Eeeccc-CCcHHHHHHHHHcCCCC----CCCceEEEecCChhhHHHHHHHH-hcCCCceEEEEeC
Q 017868          307 VGVFRY-KNTWPLCLELLRSGKID----VKPLVTHRFGFSQKEVEEAFETS-ARGGTAIKVMFNL  365 (365)
Q Consensus       307 ~~~~~~-~~~~~~~~~~l~~g~~~----~~~~~~~~~~~~~~~~~~a~~~~-~~~~~~gk~vi~~  365 (365)
                      .++... .+.++++++++++|.+.    +.+.++++|+|  +++++|++.+ .++...||+||++
T Consensus       303 ~g~~~~~~~~~~~~~~l~~~g~i~~~~~~~~~i~~~~~l--~~~~~A~~~l~~~~~~~gKvvi~~  365 (366)
T 2cdc_A          303 IGLVNGQKPHFQQAVVHLASWKTLYPKAAKMLITKTVSI--NDEKELLKVLREKEHGEIKIRILW  365 (366)
T ss_dssp             EECCCCCHHHHHHHHHHHHHHHHHSHHHHTTSEEEEEET--TCHHHHHHHHHCCCTTCCEEEEEC
T ss_pred             EEecCCCHHHHHHHHHHHHcCCCCcccchhhcEEEEEcH--HHHHHHHHHHhhhcCCceEEEEec
Confidence            998765 56789999999999965    57888999999  9999999993 3356789999975

>4eye_A Probable oxidoreductase; structural genomics, niaid, national institute of allergy AN infectious diseases; 2.10A {Mycobacterium abscessus}

Probab=100.00  E-value=2.5e-50  Score=368.08  Aligned_cols=314  Identities=24%  Similarity=0.322  Sum_probs=263.2

Q ss_pred             ccccccchhcceeEEEec---CCceEEEEecCCCCCCCcEEEEEeeeeeCcccHhhhhccccCCccCCCCcccCccceEE
Q 017868            8 QGEKEDGEEVNMAAWLLG---VNTLKIQPFELPSLGPYDVLVRMKAVGICGSDVHYLKTLRCADFVVKEPMVIGHECAGV   84 (365)
Q Consensus         8 ~~~~~~~~~~~~~~~~~~---~~~l~~~~~~~p~~~~~eVlI~v~~~~l~~~D~~~~~g~~~~~~~~~~p~~~G~e~~G~   84 (365)
                      ..++..++.+||++++..   ++.+++.++|.|+|++|||+|||.+++||++|++.+.|.+..  ...+|.++|||++|+
T Consensus        12 ~~~~~~~p~~MkA~~~~~~g~~~~l~~~~~~~P~~~~~eVlVkv~a~gi~~~D~~~~~g~~~~--~~~~p~v~G~E~~G~   89 (342)
T 4eye_A           12 LEAQTQGPGSMKAIQAQSLSGPEGLVYTDVETPGAGPNVVVVDVKAAGVCFPDYLMTKGEYQL--KMEPPFVPGIETAGV   89 (342)
T ss_dssp             ------CCCEEEEEEECSSSGGGGEEEEEEECCCCCTTCEEEEEEEEECCHHHHHHHTTCSSS--CCCSSBCCCSEEEEE
T ss_pred             CcccccCCcceEEEEEecCCCCceeEEEeCCCCCCCCCEEEEEEEEEecCHHHHHHhcCCCCC--CCCCCCccceeEEEE
Confidence            344556788899999985   456999999999999999999999999999999999875421  246799999999999


Q ss_pred             EEEeCCCCCCCCCCCEEEEcCCcCCCCCccccCCCCCCCCCccccccCCCCcceeeEEeecCCceEECCCCCCcchhccc
Q 017868           85 IEKVGSEVKTLVPGDRVALEPGISCWRCDHCKGGRYNLCPEMKFFATPPVHGSLANQVVHPADLCFKLPDNVSLEEGAMC  164 (365)
Q Consensus        85 V~~vG~~v~~~~~Gd~V~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~v~~~~~~~iP~~~~~~~a~~~  164 (365)
                      |+++|++++ |++||||+++.                            .+|+|+||+.+++++++++|+++++++|+.+
T Consensus        90 V~~vG~~v~-~~vGDrV~~~~----------------------------~~G~~aey~~v~~~~~~~iP~~~~~~~aa~l  140 (342)
T 4eye_A           90 VRSAPEGSG-IKPGDRVMAFN----------------------------FIGGYAERVAVAPSNILPTPPQLDDAEAVAL  140 (342)
T ss_dssp             EEECCTTSS-CCTTCEEEEEC----------------------------SSCCSBSEEEECGGGEEECCTTSCHHHHHHH
T ss_pred             EEEECCCCC-CCCCCEEEEec----------------------------CCCcceEEEEEcHHHeEECCCCCCHHHHHHh
Confidence            999999999 99999998862                            3599999999999999999999999999766


Q ss_pred             h-hhHHHHHHH-HhcCCCCCCEEEEEcC-CHHHHHHHHHHHHHCCCCeEEEEeCChhHHHHHHHcCCCEEEeCCCCcccH
Q 017868          165 E-PLSVGLHAC-RRANIGPETNVLIMGA-GPIGLVTMLGAPRAFGAPRIVIVDVDDYRLSVAKEIGADNIVKVSTNLQDI  241 (365)
Q Consensus       165 ~-~~~~a~~~~-~~~~~~~g~~vlI~G~-g~~G~~ai~~l~~~~g~~~vi~v~~~~~~~~~~~~~g~~~~~~~~~~~~~~  241 (365)
                      + ++.|||+++ +.+++++|++|||+|+ |++|++++| +++..|+ +|+++++++++.++++++|++.++++.   +++
T Consensus       141 ~~~~~ta~~~l~~~~~~~~g~~VlV~Gasg~iG~~~~~-~a~~~Ga-~Vi~~~~~~~~~~~~~~~ga~~v~~~~---~~~  215 (342)
T 4eye_A          141 IANYHTMYFAYARRGQLRAGETVLVLGAAGGIGTAAIQ-IAKGMGA-KVIAVVNRTAATEFVKSVGADIVLPLE---EGW  215 (342)
T ss_dssp             TTHHHHHHHHHHTTSCCCTTCEEEESSTTSHHHHHHHH-HHHHTTC-EEEEEESSGGGHHHHHHHTCSEEEESS---TTH
T ss_pred             hhHHHHHHHHHHHhcCCCCCCEEEEECCCCHHHHHHHH-HHHHcCC-EEEEEeCCHHHHHHHHhcCCcEEecCc---hhH
Confidence            5 899999999 6789999999999998 999999999 9999999 788888999999999999999988754   577


Q ss_pred             HHHHHHHHHHhCCCceEEEeCCCCHHHHHHHHHhcccCCEEEEEccCCCC-ccccchHhhhcCcEEEeeccc--------
Q 017868          242 AEEVEKIQKAMGTGIDVSFDCAGLNKTMSTALGATCAGGKVCLVGMGHHE-MTVPLTPAAVREVDVVGVFRY--------  312 (365)
Q Consensus       242 ~~~i~~~~~~~~~~~d~vid~~g~~~~~~~~~~~l~~~G~~~~~g~~~~~-~~~~~~~~~~~~~~i~~~~~~--------  312 (365)
                      .+.+++.+.  +.++|++|||+|.+ .+..++++++++|+++.+|..... ..++...+..+++++.++...        
T Consensus       216 ~~~v~~~~~--~~g~Dvvid~~g~~-~~~~~~~~l~~~G~iv~~G~~~~~~~~~~~~~~~~~~~~i~g~~~~~~~~~~~~  292 (342)
T 4eye_A          216 AKAVREATG--GAGVDMVVDPIGGP-AFDDAVRTLASEGRLLVVGFAAGGIPTIKVNRLLLRNASLIGVAWGEFLRTHAD  292 (342)
T ss_dssp             HHHHHHHTT--TSCEEEEEESCC---CHHHHHHTEEEEEEEEEC----------CCCCGGGTTCEEEECCHHHHHHHCTT
T ss_pred             HHHHHHHhC--CCCceEEEECCchh-HHHHHHHhhcCCCEEEEEEccCCCCCccCHHHHhhcCCEEEEEehhhhhhcCHH
Confidence            777776643  56899999999975 788999999999999999865432 345556678899999998632        


Q ss_pred             --CCcHHHHHHHHHcCCCCCCCceEEEecCChhhHHHHHHHHhcCCCceEEEEeC
Q 017868          313 --KNTWPLCLELLRSGKIDVKPLVTHRFGFSQKEVEEAFETSARGGTAIKVMFNL  365 (365)
Q Consensus       313 --~~~~~~~~~~l~~g~~~~~~~~~~~~~~~~~~~~~a~~~~~~~~~~gk~vi~~  365 (365)
                        .+.++++++++++| +  .+.++++|++  +++.+|++.+.+++..||+||++
T Consensus       293 ~~~~~~~~~~~l~~~g-l--~~~i~~~~~l--~~~~~A~~~~~~~~~~gKvvl~P  342 (342)
T 4eye_A          293 YLYETQAGLEKLVAEG-M--RPPVSARIPL--SEGRQALQDFADGKVYGKMVLVP  342 (342)
T ss_dssp             HHHHHHHHHHHHHHTT-C--CCCEEEEEEG--GGHHHHHHHHHTTCCCSEEEEEC
T ss_pred             HHHHHHHHHHHHHHcC-C--CCCcceEEeH--HHHHHHHHHHHhCCCCceEEEeC
Confidence              23588899999999 6  7888999999  99999999999999999999974

>3qwb_A Probable quinone oxidoreductase; rossmann fold, quinone oxidoreductases, NADPH, cytoplasm and oxidoreductase; HET: NDP; 1.59A {Saccharomyces cerevisiae} PDB: 3qwa_A*

Probab=100.00  E-value=4.5e-49  Score=358.97  Aligned_cols=308  Identities=23%  Similarity=0.318  Sum_probs=265.8

Q ss_pred             chhcceeEEEecCC---ceEEEEecCCCCCCCcEEEEEeeeeeCcccHhhhhccccCCccCCCCcccCccceEEEEEeCC
Q 017868           14 GEEVNMAAWLLGVN---TLKIQPFELPSLGPYDVLVRMKAVGICGSDVHYLKTLRCADFVVKEPMVIGHECAGVIEKVGS   90 (365)
Q Consensus        14 ~~~~~~~~~~~~~~---~l~~~~~~~p~~~~~eVlI~v~~~~l~~~D~~~~~g~~~~~~~~~~p~~~G~e~~G~V~~vG~   90 (365)
                      ++.+||++++.+++   .++++++|.|+|+++||+|||.+++||++|++...|.+.    ..+|.++|||++|+|+++|+
T Consensus         5 ~p~~mka~~~~~~g~~~~l~~~~~~~P~~~~~eVlVkv~a~gi~~~D~~~~~G~~~----~~~P~i~G~e~~G~V~~vG~   80 (334)
T 3qwb_A            5 IPEQQKVILIDEIGGYDVIKYEDYPVPSISEEELLIKNKYTGVNYIESYFRKGIYP----CEKPYVLGREASGTVVAKGK   80 (334)
T ss_dssp             CCSEEEEEEESSSSSGGGEEEEEEECCCCCTTEEEEEEEEEECCTTHHHHHHTSSC----CCSSEECCSEEEEEEEEECT
T ss_pred             CchheEEEEEecCCCCceeEEEeccCCCCCCCEEEEEEEEEecCHHHHHHHCCCCC----CCCCCccccceEEEEEEECC
Confidence            56779999998754   499999999999999999999999999999998887532    45799999999999999999


Q ss_pred             CCCCCCCCCEEEEcCCcCCCCCccccCCCCCCCCCccccccCCCCcceeeEEeec-CCceEECCCCCCcch---hccch-
Q 017868           91 EVKTLVPGDRVALEPGISCWRCDHCKGGRYNLCPEMKFFATPPVHGSLANQVVHP-ADLCFKLPDNVSLEE---GAMCE-  165 (365)
Q Consensus        91 ~v~~~~~Gd~V~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~v~-~~~~~~iP~~~~~~~---a~~~~-  165 (365)
                      +|++|++||||+++                             .+|+|+||++++ ++.++++|+++++++   |+.++ 
T Consensus        81 ~v~~~~~GdrV~~~-----------------------------~~G~~aey~~v~~~~~~~~~P~~~~~~~~~~aa~~~~  131 (334)
T 3qwb_A           81 GVTNFEVGDQVAYI-----------------------------SNSTFAQYSKISSQGPVMKLPKGTSDEELKLYAAGLL  131 (334)
T ss_dssp             TCCSCCTTCEEEEE-----------------------------CSSCSBSEEEEETTSSEEECCTTCCHHHHHHHHHHHH
T ss_pred             CCCCCCCCCEEEEe-----------------------------eCCcceEEEEecCcceEEECCCCCCHHHhhhhhhhhh
Confidence            99999999999875                             359999999999 999999999999999   66554 


Q ss_pred             hhHHHHHHHH-hcCCCCCCEEEEEcC-CHHHHHHHHHHHHHCCCCeEEEEeCChhHHHHHHHcCCCEEEeCCCCcccHHH
Q 017868          166 PLSVGLHACR-RANIGPETNVLIMGA-GPIGLVTMLGAPRAFGAPRIVIVDVDDYRLSVAKEIGADNIVKVSTNLQDIAE  243 (365)
Q Consensus       166 ~~~~a~~~~~-~~~~~~g~~vlI~G~-g~~G~~ai~~l~~~~g~~~vi~v~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~  243 (365)
                      ...|||+++. ..++++|++|||+|+ |++|++++| +++..|+ +|+++++++++.++++++|++.++++..  +++.+
T Consensus       132 ~~~ta~~~l~~~~~~~~g~~vlV~Ga~g~iG~~~~~-~a~~~Ga-~Vi~~~~~~~~~~~~~~~ga~~~~~~~~--~~~~~  207 (334)
T 3qwb_A          132 QVLTALSFTNEAYHVKKGDYVLLFAAAGGVGLILNQ-LLKMKGA-HTIAVASTDEKLKIAKEYGAEYLINASK--EDILR  207 (334)
T ss_dssp             HHHHHHHHHHTTSCCCTTCEEEESSTTBHHHHHHHH-HHHHTTC-EEEEEESSHHHHHHHHHTTCSEEEETTT--SCHHH
T ss_pred             HHHHHHHHHHHhccCCCCCEEEEECCCCHHHHHHHH-HHHHCCC-EEEEEeCCHHHHHHHHHcCCcEEEeCCC--chHHH
Confidence            7788999985 468999999999985 999999999 8899999 6888999999999999999999888643  67777


Q ss_pred             HHHHHHHHhCCCceEEEeCCCCHHHHHHHHHhcccCCEEEEEccCCCCc-cccchHhhhcCcEEEeeccc---------C
Q 017868          244 EVEKIQKAMGTGIDVSFDCAGLNKTMSTALGATCAGGKVCLVGMGHHEM-TVPLTPAAVREVDVVGVFRY---------K  313 (365)
Q Consensus       244 ~i~~~~~~~~~~~d~vid~~g~~~~~~~~~~~l~~~G~~~~~g~~~~~~-~~~~~~~~~~~~~i~~~~~~---------~  313 (365)
                      .+++.+.  +.++|++||++|. ..+..++++|+++|+++.+|...... .++...+..+++++.+....         .
T Consensus       208 ~~~~~~~--~~g~D~vid~~g~-~~~~~~~~~l~~~G~iv~~G~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  284 (334)
T 3qwb_A          208 QVLKFTN--GKGVDASFDSVGK-DTFEISLAALKRKGVFVSFGNASGLIPPFSITRLSPKNITLVRPQLYGYIADPEEWK  284 (334)
T ss_dssp             HHHHHTT--TSCEEEEEECCGG-GGHHHHHHHEEEEEEEEECCCTTCCCCCBCGGGGTTTTCEEECCCGGGGSCSHHHHH
T ss_pred             HHHHHhC--CCCceEEEECCCh-HHHHHHHHHhccCCEEEEEcCCCCCCCCcchhhhhhCceEEEEEEeccccCCHHHHH
Confidence            7776643  6789999999997 58899999999999999998654432 55666778899999875422         1


Q ss_pred             CcHHHHHHHHHcCCCCCCCceEEEecCChhhHHHHHHHHhcCCCceEEEEeC
Q 017868          314 NTWPLCLELLRSGKIDVKPLVTHRFGFSQKEVEEAFETSARGGTAIKVMFNL  365 (365)
Q Consensus       314 ~~~~~~~~~l~~g~~~~~~~~~~~~~~~~~~~~~a~~~~~~~~~~gk~vi~~  365 (365)
                      +.++++++++++|++  ++.++++|++  +++.+|++.+++++..||+|+++
T Consensus       285 ~~~~~~~~l~~~g~l--~~~i~~~~~l--~~~~~A~~~~~~~~~~gKvvi~~  332 (334)
T 3qwb_A          285 YYSDEFFGLVNSKKL--NIKIYKTYPL--RDYRTAAADIESRKTVGKLVLEI  332 (334)
T ss_dssp             HHHHHHHHHHHTTSS--CCCEEEEEEG--GGHHHHHHHHHTTCCCBEEEEEC
T ss_pred             HHHHHHHHHHHCCCc--cCceeeEEcH--HHHHHHHHHHHhCCCceEEEEec
Confidence            235789999999999  5568899999  99999999999999999999975

>4dvj_A Putative zinc-dependent alcohol dehydrogenase Pro; structural genomics, PSI-biology, NEW YORK structural genomi research consortium, nysgrc; 1.99A {Rhizobium etli}

Probab=100.00  E-value=2.8e-49  Score=363.67  Aligned_cols=317  Identities=18%  Similarity=0.221  Sum_probs=264.7

Q ss_pred             ccccccchhcceeEEEe------cCCceEEEEecCCCCCCCcEEEEEeeeeeCcccHhhhhccccCCccCCCCcccCccc
Q 017868            8 QGEKEDGEEVNMAAWLL------GVNTLKIQPFELPSLGPYDVLVRMKAVGICGSDVHYLKTLRCADFVVKEPMVIGHEC   81 (365)
Q Consensus         8 ~~~~~~~~~~~~~~~~~------~~~~l~~~~~~~p~~~~~eVlI~v~~~~l~~~D~~~~~g~~~~~~~~~~p~~~G~e~   81 (365)
                      +..++.+|++||++++.      ++..+++.++|.|+|+++||+|||.++++|++|++.+.|....   ..+|.++|||+
T Consensus        13 ~~~~~~~m~~MkA~~~~~~~~~~~~~~l~~~~~p~P~~~~~eVlVkv~a~gi~~~D~~~~~g~~~~---~~~p~v~G~E~   89 (363)
T 4dvj_A           13 LGTENLYFQSMKAVGYNKPAPITDDASLLDIELPKPAPAGHDILVEVKAVSVNPVDYKVRRSTPPD---GTDWKVIGYDA   89 (363)
T ss_dssp             ------CCCEEEEEEBSSCCCTTSTTSSEEEEEECCCCCTTEEEEEEEEEECCHHHHHHHHHCCC-----CCSBCCCCCE
T ss_pred             ccchhhhhheeEEEEEeccCCCCCCceEEEeecCCCCCCCCEEEEEEEEEEeCHHHHHHHcCCCCC---CCCCCccccee
Confidence            35566778889999995      3578999999999999999999999999999999999876432   46789999999


Q ss_pred             eEEEEEeCCCCCCCCCCCEEEEcCCcCCCCCccccCCCCCCCCCccccccCCCCcceeeEEeecCCceEECCCCCCcchh
Q 017868           82 AGVIEKVGSEVKTLVPGDRVALEPGISCWRCDHCKGGRYNLCPEMKFFATPPVHGSLANQVVHPADLCFKLPDNVSLEEG  161 (365)
Q Consensus        82 ~G~V~~vG~~v~~~~~Gd~V~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~v~~~~~~~iP~~~~~~~a  161 (365)
                      +|+|+++|++|++|++||||++...                         ....|+|+||++++++.++++|+++++++|
T Consensus        90 ~G~V~~vG~~v~~~~vGdrV~~~~~-------------------------~~~~G~~aey~~v~~~~~~~iP~~~~~~~a  144 (363)
T 4dvj_A           90 AGIVSAVGPDVTLFRPGDEVFYAGS-------------------------IIRPGTNAEFHLVDERIVGRKPKTLDWAEA  144 (363)
T ss_dssp             EEEEEEECTTCCSCCTTCEEEECCC-------------------------TTSCCSCBSEEEEEGGGCEECCTTSCHHHH
T ss_pred             EEEEEEeCCCCCCCCCCCEEEEccC-------------------------CCCCccceEEEEeCHHHeeECCCCCCHHHH
Confidence            9999999999999999999987421                         124699999999999999999999999999


Q ss_pred             ccch-hhHHHHHHH-HhcCCC-----CCCEEEEEc-CCHHHHHHHHHHHHHC-CCCeEEEEeCChhHHHHHHHcCCCEEE
Q 017868          162 AMCE-PLSVGLHAC-RRANIG-----PETNVLIMG-AGPIGLVTMLGAPRAF-GAPRIVIVDVDDYRLSVAKEIGADNIV  232 (365)
Q Consensus       162 ~~~~-~~~~a~~~~-~~~~~~-----~g~~vlI~G-~g~~G~~ai~~l~~~~-g~~~vi~v~~~~~~~~~~~~~g~~~~~  232 (365)
                      +.++ ...|||+++ +.++++     +|++|||+| +|++|++++| +++.+ |+ +|++++++++|.++++++|++.++
T Consensus       145 a~l~~~~~ta~~al~~~~~~~~~~~~~g~~VlV~Ga~G~vG~~a~q-lak~~~g~-~Vi~~~~~~~~~~~~~~lGad~vi  222 (363)
T 4dvj_A          145 AALPLTSITAWEAFFDRLDVNKPVPGAAPAILIVGGAGGVGSIAVQ-IARQRTDL-TVIATASRPETQEWVKSLGAHHVI  222 (363)
T ss_dssp             HTSHHHHHHHHHHHHTTSCTTSCCTTSEEEEEEESTTSHHHHHHHH-HHHHHCCS-EEEEECSSHHHHHHHHHTTCSEEE
T ss_pred             HhhhhHHHHHHHHHHHhhCcCcCcCCCCCEEEEECCCCHHHHHHHH-HHHHhcCC-EEEEEeCCHHHHHHHHHcCCCEEE
Confidence            9987 667999998 567888     899999998 5999999999 88874 66 799999999999999999999998


Q ss_pred             eCCCCcccHHHHHHHHHHHhCCCceEEEeCCCCHHHHHHHHHhcccCCEEEEEccCCCCccccchHhhhcCcEEEeeccc
Q 017868          233 KVSTNLQDIAEEVEKIQKAMGTGIDVSFDCAGLNKTMSTALGATCAGGKVCLVGMGHHEMTVPLTPAAVREVDVVGVFRY  312 (365)
Q Consensus       233 ~~~~~~~~~~~~i~~~~~~~~~~~d~vid~~g~~~~~~~~~~~l~~~G~~~~~g~~~~~~~~~~~~~~~~~~~i~~~~~~  312 (365)
                      ++.   +++.+.++++   .++++|+||||+|.+..+..++++|+++|+++.++..   ..++...+..+++++.+...+
T Consensus       223 ~~~---~~~~~~v~~~---~~~g~Dvvid~~g~~~~~~~~~~~l~~~G~iv~~g~~---~~~~~~~~~~k~~~i~~~~~~  293 (363)
T 4dvj_A          223 DHS---KPLAAEVAAL---GLGAPAFVFSTTHTDKHAAEIADLIAPQGRFCLIDDP---SAFDIMLFKRKAVSIHHELMF  293 (363)
T ss_dssp             CTT---SCHHHHHHTT---CSCCEEEEEECSCHHHHHHHHHHHSCTTCEEEECSCC---SSCCGGGGTTTTCEEEECCTT
T ss_pred             eCC---CCHHHHHHHh---cCCCceEEEECCCchhhHHHHHHHhcCCCEEEEECCC---CccchHHHhhccceEEEEEee
Confidence            864   3566666654   3679999999999877889999999999999998542   345556677889999886543


Q ss_pred             -------------CCcHHHHHHHHHcCCCCCCCceEEEe-cCChhhHHHHHHHHhcCCCceEEEEeC
Q 017868          313 -------------KNTWPLCLELLRSGKIDVKPLVTHRF-GFSQKEVEEAFETSARGGTAIKVMFNL  365 (365)
Q Consensus       313 -------------~~~~~~~~~~l~~g~~~~~~~~~~~~-~~~~~~~~~a~~~~~~~~~~gk~vi~~  365 (365)
                                   .+.++++++++++|++  ++.++++| .++++++.+|++.+.+++..||+||++
T Consensus       294 ~~~~~~~~~~~~~~~~~~~~~~l~~~g~l--~~~i~~~~~~~~l~~~~~A~~~~~~~~~~GKvVl~~  358 (363)
T 4dvj_A          294 TRPMFGTPDMSEQGRLLNDVSRLVDEGRL--RTTLTNRLSPINAANLKQAHALVESGTARGKVVIEG  358 (363)
T ss_dssp             HHHHHTCTTTHHHHHHHHHHHHHHHHTSS--CCCEEEEECSCSHHHHHHHHHHHHHTCCCSEEEEEC
T ss_pred             ccccccCcchhhHHHHHHHHHHHHHCCCe--eccccceecCCCHHHHHHHHHHHHhCCCceEEEEeC
Confidence                         1357899999999999  67777777 334499999999999999999999974

>3tqh_A Quinone oxidoreductase; HET: NDP; 2.44A {Coxiella burnetii}

Probab=100.00  E-value=1.8e-49  Score=359.51  Aligned_cols=307  Identities=17%  Similarity=0.203  Sum_probs=257.1

Q ss_pred             hhcceeEEEecCC---ceEEEEecCCCCCCCcEEEEEeeeeeCcccHhhhhcc--ccCCccCCCCcccCccceEEEEEeC
Q 017868           15 EEVNMAAWLLGVN---TLKIQPFELPSLGPYDVLVRMKAVGICGSDVHYLKTL--RCADFVVKEPMVIGHECAGVIEKVG   89 (365)
Q Consensus        15 ~~~~~~~~~~~~~---~l~~~~~~~p~~~~~eVlI~v~~~~l~~~D~~~~~g~--~~~~~~~~~p~~~G~e~~G~V~~vG   89 (365)
                      |++||++++.+.+   .+++.++|.|+|+++||+|||.++++|++|++.+.|.  ........+|.++|||++|+|+++|
T Consensus         4 m~~Mka~~~~~~g~~~~l~~~~~~~P~~~~~eVlVkv~a~gi~~~D~~~~~g~~~~~~~~~~~~p~v~G~E~~G~V~~vG   83 (321)
T 3tqh_A            4 MKEMKAIQFDQFGPPKVLKLVDTPTPEYRKNQMLIKVHAASLNPIDYKTRNGSGFVAKKLKNNLPSGLGYDFSGEVIELG   83 (321)
T ss_dssp             -CEEEEEEESSSCSGGGEEEEEEECCCCCTTCEEEEEEEEECCHHHHHHHTTCSHHHHHHTTSCSBCCCCEEEEEEEEEC
T ss_pred             cccceEEEEccCCCcceeEEEecCCCCCCCCEEEEEEEEEEcCHHHHHHhcCCccccccccCCCCCcccceeEEEEEEeC
Confidence            4579999998654   4999999999999999999999999999999998872  1111235679999999999999999


Q ss_pred             CCCCCCCCCCEEEEcCCcCCCCCccccCCCCCCCCCccccccCCCCcceeeEEeecCCceEECCCCCCcchhccch-hhH
Q 017868           90 SEVKTLVPGDRVALEPGISCWRCDHCKGGRYNLCPEMKFFATPPVHGSLANQVVHPADLCFKLPDNVSLEEGAMCE-PLS  168 (365)
Q Consensus        90 ~~v~~~~~Gd~V~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~v~~~~~~~iP~~~~~~~a~~~~-~~~  168 (365)
                      ++|++|++||||++.+..+                        ...|+|+||+++++++++++|+++++++|+.++ .+.
T Consensus        84 ~~v~~~~~GdrV~~~~~~~------------------------~~~G~~aey~~v~~~~~~~iP~~~~~~~aa~l~~~~~  139 (321)
T 3tqh_A           84 SDVNNVNIGDKVMGIAGFP------------------------DHPCCYAEYVCASPDTIIQKLEKLSFLQAASLPTAGL  139 (321)
T ss_dssp             TTCCSCCTTCEEEEECSTT------------------------TCCCCSBSEEEECGGGEEECCTTSCHHHHHHSHHHHH
T ss_pred             CCCCCCCCCCEEEEccCCC------------------------CCCCcceEEEEecHHHhccCCCCCCHHHHhhhhhHHH
Confidence            9999999999998864211                        246999999999999999999999999999887 667


Q ss_pred             HHHHHHHhcCCCCCCEEEEEc-CCHHHHHHHHHHHHHCCCCeEEEEeCChhHHHHHHHcCCCEEEeCCCCccc-HHHHHH
Q 017868          169 VGLHACRRANIGPETNVLIMG-AGPIGLVTMLGAPRAFGAPRIVIVDVDDYRLSVAKEIGADNIVKVSTNLQD-IAEEVE  246 (365)
Q Consensus       169 ~a~~~~~~~~~~~g~~vlI~G-~g~~G~~ai~~l~~~~g~~~vi~v~~~~~~~~~~~~~g~~~~~~~~~~~~~-~~~~i~  246 (365)
                      |||++++.+++++|++|||+| +|++|++++| +++..|+ +|+++. ++++.++++++|++.++++..  .+ +.+.  
T Consensus       140 ta~~al~~~~~~~g~~vlV~Ga~G~vG~~a~q-~a~~~Ga-~vi~~~-~~~~~~~~~~lGa~~~i~~~~--~~~~~~~--  212 (321)
T 3tqh_A          140 TALQALNQAEVKQGDVVLIHAGAGGVGHLAIQ-LAKQKGT-TVITTA-SKRNHAFLKALGAEQCINYHE--EDFLLAI--  212 (321)
T ss_dssp             HHHHHHHHTTCCTTCEEEESSTTSHHHHHHHH-HHHHTTC-EEEEEE-CHHHHHHHHHHTCSEEEETTT--SCHHHHC--
T ss_pred             HHHHHHHhcCCCCCCEEEEEcCCcHHHHHHHH-HHHHcCC-EEEEEe-ccchHHHHHHcCCCEEEeCCC--cchhhhh--
Confidence            999999889999999999997 5999999999 9999999 577775 566789999999999988654  33 3322  


Q ss_pred             HHHHHhCCCceEEEeCCCCHHHHHHHHHhcccCCEEEEEccCCCCccccchHhhhcCcEEEeeccc--CCcHHHHHHHHH
Q 017868          247 KIQKAMGTGIDVSFDCAGLNKTMSTALGATCAGGKVCLVGMGHHEMTVPLTPAAVREVDVVGVFRY--KNTWPLCLELLR  324 (365)
Q Consensus       247 ~~~~~~~~~~d~vid~~g~~~~~~~~~~~l~~~G~~~~~g~~~~~~~~~~~~~~~~~~~i~~~~~~--~~~~~~~~~~l~  324 (365)
                            -.++|+||||+|.+ ....++++++++|+++.+|.....  .....+..+++++.+....  .+.+++++++++
T Consensus       213 ------~~g~D~v~d~~g~~-~~~~~~~~l~~~G~iv~~g~~~~~--~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~  283 (321)
T 3tqh_A          213 ------STPVDAVIDLVGGD-VGIQSIDCLKETGCIVSVPTITAG--RVIEVAKQKHRRAFGLLKQFNIEELHYLGKLVS  283 (321)
T ss_dssp             ------CSCEEEEEESSCHH-HHHHHGGGEEEEEEEEECCSTTHH--HHHHHHHHTTCEEECCCCCCCHHHHHHHHHHHH
T ss_pred             ------ccCCCEEEECCCcH-HHHHHHHhccCCCEEEEeCCCCch--hhhhhhhhcceEEEEEecCCCHHHHHHHHHHHH
Confidence                  26899999999976 458999999999999998753322  1223456788888885433  467999999999


Q ss_pred             cCCCCCCCceEEEecCChhhHHHHHHHHhcCCCceEEEEeC
Q 017868          325 SGKIDVKPLVTHRFGFSQKEVEEAFETSARGGTAIKVMFNL  365 (365)
Q Consensus       325 ~g~~~~~~~~~~~~~~~~~~~~~a~~~~~~~~~~gk~vi~~  365 (365)
                      +|.+  ++.++++|++  +++.+|++.+++++..||+|+++
T Consensus       284 ~g~l--~~~i~~~~~l--~~~~~A~~~~~~~~~~gKvvl~~  320 (321)
T 3tqh_A          284 EDKL--RIEISRIFQL--SEAVTAHELLETGHVRGKLVFKV  320 (321)
T ss_dssp             TTSS--CCCEEEEECG--GGHHHHHHHHHTTCCCSEEEEEC
T ss_pred             CCCc--ccccccEEcH--HHHHHHHHHHHcCCCCceEEEEe
Confidence            9999  5678999999  99999999999999999999975

>3gaz_A Alcohol dehydrogenase superfamily protein; oxidoreductase, PSI-II, alcohol dehydrogenase superf structural genomics; 1.96A {Novosphingobium aromaticivorans}

Probab=100.00  E-value=4.8e-49  Score=359.71  Aligned_cols=311  Identities=22%  Similarity=0.300  Sum_probs=263.6

Q ss_pred             chhcceeEEEecCCc-eEEEEecCCCCCCCcEEEEEeeeeeCcccHhhhhccccCCccCCCCcccCccceEEEEEeCCCC
Q 017868           14 GEEVNMAAWLLGVNT-LKIQPFELPSLGPYDVLVRMKAVGICGSDVHYLKTLRCADFVVKEPMVIGHECAGVIEKVGSEV   92 (365)
Q Consensus        14 ~~~~~~~~~~~~~~~-l~~~~~~~p~~~~~eVlI~v~~~~l~~~D~~~~~g~~~~~~~~~~p~~~G~e~~G~V~~vG~~v   92 (365)
                      ++.+||++++.+++. +++.++|.|+|+++||+|||.++++|++|++.+.|.... ....+|.++|||++|+|+++|++|
T Consensus         4 ~~~~mka~~~~~~~~~l~~~~~~~P~~~~~eVlVkv~a~gi~~~D~~~~~g~~~~-~~~~~P~v~G~E~~G~V~~vG~~v   82 (343)
T 3gaz_A            4 TTPTMIAAVVEEANGPFVLRKLARPQPAPGQVLVQIEASGTNPLDAKIRAGEAPH-AQQPLPAILGMDLAGTVVAVGPEV   82 (343)
T ss_dssp             --CEEEEEEECSTTCCEEEEEEECCCCCTTEEEEEEEEEECCHHHHHHHTTCCGG-GCCCSSBCCCCEEEEEEEEECTTC
T ss_pred             CchhheEEEEecCCCceEEEeccCCCCCCCEEEEEEEEEEeCHhhHHHhCCCCCC-CCCCCCcccCcceEEEEEEECCCC
Confidence            357799999998764 999999999999999999999999999999998875321 124679999999999999999999


Q ss_pred             CCCCCCCEEEEcCCcCCCCCccccCCCCCCCCCccccccCCCCcceeeEEeecCCceEECCCCCCcchhccch-hhHHHH
Q 017868           93 KTLVPGDRVALEPGISCWRCDHCKGGRYNLCPEMKFFATPPVHGSLANQVVHPADLCFKLPDNVSLEEGAMCE-PLSVGL  171 (365)
Q Consensus        93 ~~~~~Gd~V~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~v~~~~~~~iP~~~~~~~a~~~~-~~~~a~  171 (365)
                      ++|++||||++...           +            ....+|+|+||+++++++++++|+++++++|+.++ .+.|||
T Consensus        83 ~~~~vGdrV~~~~~-----------g------------~~~~~G~~aey~~v~~~~~~~~P~~~~~~~aa~l~~~~~ta~  139 (343)
T 3gaz_A           83 DSFRVGDAVFGLTG-----------G------------VGGLQGTHAQFAAVDARLLASKPAALTMRQASVLPLVFITAW  139 (343)
T ss_dssp             CSCCTTCEEEEECC-----------S------------STTCCCSSBSEEEEEGGGEEECCTTSCHHHHHTSHHHHHHHH
T ss_pred             CCCCCCCEEEEEeC-----------C------------CCCCCcceeeEEEecHHHeeeCCCCCCHHHHHHhhhhHHHHH
Confidence            99999999987421           1            11246999999999999999999999999999887 677999


Q ss_pred             HHH-HhcCCCCCCEEEEEcC-CHHHHHHHHHHHHHCCCCeEEEEeCChhHHHHHHHcCCCEEEeCCCCcccHHHHHHHHH
Q 017868          172 HAC-RRANIGPETNVLIMGA-GPIGLVTMLGAPRAFGAPRIVIVDVDDYRLSVAKEIGADNIVKVSTNLQDIAEEVEKIQ  249 (365)
Q Consensus       172 ~~~-~~~~~~~g~~vlI~G~-g~~G~~ai~~l~~~~g~~~vi~v~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~i~~~~  249 (365)
                      +++ +.+++++|++|||+|+ |++|++++| +++..|+ +|+++ .++++.++++++|++. ++   ..+++.+.+++.+
T Consensus       140 ~~l~~~~~~~~g~~VlV~Ga~g~iG~~~~q-~a~~~Ga-~Vi~~-~~~~~~~~~~~lGa~~-i~---~~~~~~~~~~~~~  212 (343)
T 3gaz_A          140 EGLVDRAQVQDGQTVLIQGGGGGVGHVAIQ-IALARGA-RVFAT-ARGSDLEYVRDLGATP-ID---ASREPEDYAAEHT  212 (343)
T ss_dssp             HHHTTTTCCCTTCEEEEETTTSHHHHHHHH-HHHHTTC-EEEEE-ECHHHHHHHHHHTSEE-EE---TTSCHHHHHHHHH
T ss_pred             HHHHHhcCCCCCCEEEEecCCCHHHHHHHH-HHHHCCC-EEEEE-eCHHHHHHHHHcCCCE-ec---cCCCHHHHHHHHh
Confidence            998 7899999999999995 999999999 9999999 67777 8899999999999988 55   3467777777764


Q ss_pred             HHhCCCceEEEeCCCCHHHHHHHHHhcccCCEEEEEccCCCCccccchHhhhcCcEEEeeccc------------CCcHH
Q 017868          250 KAMGTGIDVSFDCAGLNKTMSTALGATCAGGKVCLVGMGHHEMTVPLTPAAVREVDVVGVFRY------------KNTWP  317 (365)
Q Consensus       250 ~~~~~~~d~vid~~g~~~~~~~~~~~l~~~G~~~~~g~~~~~~~~~~~~~~~~~~~i~~~~~~------------~~~~~  317 (365)
                      .  +.++|++||++|. ..+..++++|+++|+++.++...   ..+...+..+++++.+++..            .+.++
T Consensus       213 ~--~~g~D~vid~~g~-~~~~~~~~~l~~~G~iv~~g~~~---~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~~  286 (343)
T 3gaz_A          213 A--GQGFDLVYDTLGG-PVLDASFSAVKRFGHVVSCLGWG---THKLAPLSFKQATYSGVFTLHTLLANEGLAHFGEMLR  286 (343)
T ss_dssp             T--TSCEEEEEESSCT-HHHHHHHHHEEEEEEEEESCCCS---CCCCHHHHHTTCEEEECCTTHHHHHTCSHHHHHHHHH
T ss_pred             c--CCCceEEEECCCc-HHHHHHHHHHhcCCeEEEEcccC---ccccchhhhcCcEEEEEEeccchhcccchHHHHHHHH
Confidence            3  6799999999997 48899999999999999987543   34556678899999997643            25688


Q ss_pred             HHHHHHHcCCCCCCCceE-EEecCChhhHHHHHHHHhcCCC----ceEEEEeC
Q 017868          318 LCLELLRSGKIDVKPLVT-HRFGFSQKEVEEAFETSARGGT----AIKVMFNL  365 (365)
Q Consensus       318 ~~~~~l~~g~~~~~~~~~-~~~~~~~~~~~~a~~~~~~~~~----~gk~vi~~  365 (365)
                      ++++++++|++  ++.++ ++|++  +++.+|++.+++++.    +||+|+++
T Consensus       287 ~~~~l~~~g~l--~~~i~~~~~~l--~~~~~A~~~~~~~~~~Gr~~GK~v~~~  335 (343)
T 3gaz_A          287 EADALVQTGKL--APRLDPRTFSI--AEIGSAYDAVLGRNDVPRQRGKIAITV  335 (343)
T ss_dssp             HHHHHHHTTCC--CCCBCSCCEET--TCHHHHHHHHHTCTTCCCCSSBCEEEC
T ss_pred             HHHHHHHCCCc--ccCccCcEecH--HHHHHHHHHHHcCCCcccccceEEEEe
Confidence            99999999999  56777 78999  999999999988854    78888874

>3pi7_A NADH oxidoreductase; groes-like fold, NAD(P)-binding rossmann fold, structural GE joint center for structural genomics, JCSG; HET: MSE; 1.71A {Mesorhizobium loti}

Probab=100.00  E-value=1.3e-50  Score=371.11  Aligned_cols=318  Identities=19%  Similarity=0.189  Sum_probs=262.7

Q ss_pred             CCCccccccchhcceeEEEe------cCCceEEEEe---------cCCCCCCCcEEEEEeeeeeCcccHhhhhccccCCc
Q 017868            5 GMSQGEKEDGEEVNMAAWLL------GVNTLKIQPF---------ELPSLGPYDVLVRMKAVGICGSDVHYLKTLRCADF   69 (365)
Q Consensus         5 ~~~~~~~~~~~~~~~~~~~~------~~~~l~~~~~---------~~p~~~~~eVlI~v~~~~l~~~D~~~~~g~~~~~~   69 (365)
                      |||+   ++++.+||++++.      +++.+++.++         |.|+|+++||+|||.++++|++|++.+.|.+..  
T Consensus         1 gMs~---m~~p~~mka~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~P~~~~~eVlVkv~a~gi~~~D~~~~~G~~~~--   75 (349)
T 3pi7_A            1 GMSP---MTIPSEMKALLLVGDGYTKTPSGSALEAMEPYLEQGRIAVPAPGPSQVLIKVNLASINPSDVAFIKGQYGQ--   75 (349)
T ss_dssp             -------CCCCSEEEEEEECSCBSCSSCCCSCCCCSTTTEEEEEEECCCCCTTEEEEEEEEEECCHHHHHHHTTCSSS--
T ss_pred             CCCC---CCCchhheEEEEEccccCCCcccceEEEeecccccccCCCCCCCCCeEEEEEEEecCCHHHHHHhcccCCC--
Confidence            6886   5577889999999      5678999888         999999999999999999999999999875432  


Q ss_pred             cCCCCcccCccceEEEEEeCCCC-CCCCCCCEEEEcCCcCCCCCccccCCCCCCCCCccccccCCCCcceeeEEeecCCc
Q 017868           70 VVKEPMVIGHECAGVIEKVGSEV-KTLVPGDRVALEPGISCWRCDHCKGGRYNLCPEMKFFATPPVHGSLANQVVHPADL  148 (365)
Q Consensus        70 ~~~~p~~~G~e~~G~V~~vG~~v-~~~~~Gd~V~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~v~~~~  148 (365)
                      ...+|.++|||++|+|+++|++| ++|++||||++...                         ...+|+|+||+++++++
T Consensus        76 ~~~~p~v~G~E~~G~V~~vG~~v~~~~~vGdrV~~~~g-------------------------~~~~G~~aey~~v~~~~  130 (349)
T 3pi7_A           76 PRVKGRPAGFEGVGTIVAGGDEPYAKSLVGKRVAFATG-------------------------LSNWGSWAEYAVAEAAA  130 (349)
T ss_dssp             CBCTTSBCCSEEEEEEEEECSSHHHHHHTTCEEEEECT-------------------------TSSCCSSBSEEEEEGGG
T ss_pred             CCCCCCCccceEEEEEEEECCCccCCCCCCCEEEEecc-------------------------CCCCccceeeEeechHH
Confidence            24679999999999999999999 99999999987631                         12569999999999999


Q ss_pred             eEECCCCCCcchhccch-hhHHHHHHHHhcCCCCC-CEEEEEc-CCHHHHHHHHHHHHHCCCCeEEEEeCChhHHHHHHH
Q 017868          149 CFKLPDNVSLEEGAMCE-PLSVGLHACRRANIGPE-TNVLIMG-AGPIGLVTMLGAPRAFGAPRIVIVDVDDYRLSVAKE  225 (365)
Q Consensus       149 ~~~iP~~~~~~~a~~~~-~~~~a~~~~~~~~~~~g-~~vlI~G-~g~~G~~ai~~l~~~~g~~~vi~v~~~~~~~~~~~~  225 (365)
                      ++++|+++++++|+.++ ...|||++++.++ ++| ++|||+| +|++|++++| +++..|+ +|+++++++++.+++++
T Consensus       131 ~~~iP~~~~~~~aa~l~~~~~ta~~~~~~~~-~~g~~~vli~gg~g~vG~~a~q-la~~~Ga-~Vi~~~~~~~~~~~~~~  207 (349)
T 3pi7_A          131 CIPLLDTVRDEDGAAMIVNPLTAIAMFDIVK-QEGEKAFVMTAGASQLCKLIIG-LAKEEGF-RPIVTVRRDEQIALLKD  207 (349)
T ss_dssp             EEECCTTCCC--GGGSSHHHHHHHHHHHHHH-HHCCSEEEESSTTSHHHHHHHH-HHHHHTC-EEEEEESCGGGHHHHHH
T ss_pred             eEECCCCCCHHHHhhccccHHHHHHHHHHHh-hCCCCEEEEeCCCcHHHHHHHH-HHHHCCC-EEEEEeCCHHHHHHHHH
Confidence            99999999999999775 6677887777666 666 6888885 5999999999 8899999 78899999999999999


Q ss_pred             cCCCEEEeCCCCcccHHHHHHHHHHHhCCCceEEEeCCCCHHHHHHHHHhcccCCEEEEEccCC-CCccccc-hHhhhcC
Q 017868          226 IGADNIVKVSTNLQDIAEEVEKIQKAMGTGIDVSFDCAGLNKTMSTALGATCAGGKVCLVGMGH-HEMTVPL-TPAAVRE  303 (365)
Q Consensus       226 ~g~~~~~~~~~~~~~~~~~i~~~~~~~~~~~d~vid~~g~~~~~~~~~~~l~~~G~~~~~g~~~-~~~~~~~-~~~~~~~  303 (365)
                      +|++.++++..  +++.+.+++.+.  +.++|++|||+|.. .+..++++++++|+++.+|... ....++. ..+..++
T Consensus       208 ~Ga~~~~~~~~--~~~~~~v~~~~~--~~g~D~vid~~g~~-~~~~~~~~l~~~G~iv~~G~~~~~~~~~~~~~~~~~~~  282 (349)
T 3pi7_A          208 IGAAHVLNEKA--PDFEATLREVMK--AEQPRIFLDAVTGP-LASAIFNAMPKRARWIIYGRLDPDATVIREPGQLIFQH  282 (349)
T ss_dssp             HTCSEEEETTS--TTHHHHHHHHHH--HHCCCEEEESSCHH-HHHHHHHHSCTTCEEEECCCSCCSCCCCSCTHHHHHSC
T ss_pred             cCCCEEEECCc--HHHHHHHHHHhc--CCCCcEEEECCCCh-hHHHHHhhhcCCCEEEEEeccCCCCCCCCchhhhhccc
Confidence            99999988643  678888887764  56899999999976 5688999999999999998543 3345555 6788899


Q ss_pred             cEEEeeccc----------CCcHHHHHHHHHcCCCCCCCceEEEecCChhhHHHHHHHHhcCCCceEEEEeC
Q 017868          304 VDVVGVFRY----------KNTWPLCLELLRSGKIDVKPLVTHRFGFSQKEVEEAFETSARGGTAIKVMFNL  365 (365)
Q Consensus       304 ~~i~~~~~~----------~~~~~~~~~~l~~g~~~~~~~~~~~~~~~~~~~~~a~~~~~~~~~~gk~vi~~  365 (365)
                      +++.+++..          .+.++++++++++|++  ++.++++|+|  +++.+|++.+. +...||+||++
T Consensus       283 ~~i~g~~~~~~~~~~~~~~~~~~~~~~~l~~~g~l--~~~i~~~~~l--~~~~~A~~~~~-~~~~gKvvl~p  349 (349)
T 3pi7_A          283 KHIEGFWLSEWMRQFKERRGPAILEAQKRFSDGRW--STDVTAVVPL--AEAIAWVPAEL-TKPNGKVFIRP  349 (349)
T ss_dssp             CEEEECCHHHHHHHTHHHHHHHHHHC-CTTTTSSC--CC-CCEEEEH--HHHHHHHHHHH-TSSSSCEEEEC
T ss_pred             cEEEEEEehhhhhhCcHHHHHHHHHHHHHHHcCCc--ccccceEEcH--HHHHHHHHHHh-CCCCceEEEeC
Confidence            999998653          3467788899999999  6778899999  99999999544 45779999975

>3gqv_A Enoyl reductase; medium-chain reductase (MDR superfamily), rossmann fold, NAD binding, oxidoreductase; HET: NAP; 1.74A {Aspergillus terreus} PDB: 3b6z_A* 3b70_A*

Probab=100.00  E-value=1e-48  Score=361.18  Aligned_cols=317  Identities=19%  Similarity=0.228  Sum_probs=260.0

Q ss_pred             cccchhcceeEEEecCCceEEE-EecCCCCCCCcEEEEEeeeeeCcccHhhhhccccCCccCCCCcccCccceEEEEEeC
Q 017868           11 KEDGEEVNMAAWLLGVNTLKIQ-PFELPSLGPYDVLVRMKAVGICGSDVHYLKTLRCADFVVKEPMVIGHECAGVIEKVG   89 (365)
Q Consensus        11 ~~~~~~~~~~~~~~~~~~l~~~-~~~~p~~~~~eVlI~v~~~~l~~~D~~~~~g~~~~~~~~~~p~~~G~e~~G~V~~vG   89 (365)
                      ++.++.+|+++++.+++.+++. ++|.|+|+++||+|||.+++||++|++.+.+.      ..+|.++|||++|+|+++|
T Consensus         5 tm~~p~~mkA~v~~~~~~l~~~~~~~~p~~~~~eVlVkv~a~gi~~~D~~~~~g~------~~~p~v~G~e~~G~V~~vG   78 (371)
T 3gqv_A            5 PFIPPPQQTALTVNDHDEVTVWNAAPCPMLPRDQVYVRVEAVAINPSDTSMRGQF------ATPWAFLGTDYAGTVVAVG   78 (371)
T ss_dssp             CCCCCSCEEEEEECTTSCEEEEEEECCCCCCTTSEEEEEEEEECCGGGGC-----------CCTTSCCCSEEEEEEEEEC
T ss_pred             CCCCchhceeEEEcCCCceEEeccCCCCCCCCCEEEEEEEEEEcCHHHHHHhhcC------CCCCccCccccEEEEEEeC
Confidence            3667888999999999999999 99999999999999999999999999887652      3468999999999999999


Q ss_pred             CCCCCCCCCCEEEEcCCcCCCCCccccCCCCCCCCCccccccCCCCcceeeEEeecCCceEECCCCCCcchhccch-hhH
Q 017868           90 SEVKTLVPGDRVALEPGISCWRCDHCKGGRYNLCPEMKFFATPPVHGSLANQVVHPADLCFKLPDNVSLEEGAMCE-PLS  168 (365)
Q Consensus        90 ~~v~~~~~Gd~V~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~v~~~~~~~iP~~~~~~~a~~~~-~~~  168 (365)
                      ++|++|++||||++.       |..|..+.             ..+|+|+||+++++++++++|+++++++|+.++ .+.
T Consensus        79 ~~v~~~~~GdrV~~~-------~~~~~~~~-------------~~~G~~aey~~v~~~~~~~~P~~~~~~~aa~~~~~~~  138 (371)
T 3gqv_A           79 SDVTHIQVGDRVYGA-------QNEMCPRT-------------PDQGAFSQYTVTRGRVWAKIPKGLSFEQAAALPAGIS  138 (371)
T ss_dssp             TTCCSCCTTCEEEEE-------CCTTCTTC-------------TTCCSSBSEEECCTTCEEECCTTCCHHHHHTSHHHHH
T ss_pred             CCCCCCCCCCEEEEe-------ccCCCCCC-------------CCCCcCcCeEEEchhheEECCCCCCHHHHhhhhhhHH
Confidence            999999999999765       44554432             356999999999999999999999999999887 667


Q ss_pred             HHHHHH-Hh-cCC-----------CCCCEEEEEcC-CHHHHHHHHHHHHHCCCCeEEEEeCChhHHHHHHHcCCCEEEeC
Q 017868          169 VGLHAC-RR-ANI-----------GPETNVLIMGA-GPIGLVTMLGAPRAFGAPRIVIVDVDDYRLSVAKEIGADNIVKV  234 (365)
Q Consensus       169 ~a~~~~-~~-~~~-----------~~g~~vlI~G~-g~~G~~ai~~l~~~~g~~~vi~v~~~~~~~~~~~~~g~~~~~~~  234 (365)
                      |||+++ +. .++           ++|++|||+|+ |++|++++| +++..|+ +|+++. +++|.++++++|++.++++
T Consensus       139 ta~~~l~~~~~~~~~~~~~~~~~~~~g~~VlV~Ga~G~vG~~a~q-la~~~Ga-~Vi~~~-~~~~~~~~~~lGa~~vi~~  215 (371)
T 3gqv_A          139 TAGLAMKLLGLPLPSPSADQPPTHSKPVYVLVYGGSTATATVTMQ-MLRLSGY-IPIATC-SPHNFDLAKSRGAEEVFDY  215 (371)
T ss_dssp             HHHHHHHHHTCCCCCSSCSSCCCCSSCCEEEEESTTSHHHHHHHH-HHHHTTC-EEEEEE-CGGGHHHHHHTTCSEEEET
T ss_pred             HHHHHHHhhccCCCCCccccccccCCCcEEEEECCCcHHHHHHHH-HHHHCCC-EEEEEe-CHHHHHHHHHcCCcEEEEC
Confidence            899998 45 443           89999999998 999999999 9999999 567764 7899999999999999986


Q ss_pred             CCCcccHHHHHHHHHHHhCCCceEEEeCCCCHHHHHHHHHhc-ccCCEEEEEccCCC------Ccccc---chHhhhcCc
Q 017868          235 STNLQDIAEEVEKIQKAMGTGIDVSFDCAGLNKTMSTALGAT-CAGGKVCLVGMGHH------EMTVP---LTPAAVREV  304 (365)
Q Consensus       235 ~~~~~~~~~~i~~~~~~~~~~~d~vid~~g~~~~~~~~~~~l-~~~G~~~~~g~~~~------~~~~~---~~~~~~~~~  304 (365)
                      ..  +++.+.+++++   ++++|++|||+|.+..+..++++| +++|+++.+|....      .....   ...+..+++
T Consensus       216 ~~--~~~~~~v~~~t---~g~~d~v~d~~g~~~~~~~~~~~l~~~~G~iv~~g~~~~~~~~~~~~~~~~~~~~~~~~k~~  290 (371)
T 3gqv_A          216 RA--PNLAQTIRTYT---KNNLRYALDCITNVESTTFCFAAIGRAGGHYVSLNPFPEHAATRKMVTTDWTLGPTIFGEGS  290 (371)
T ss_dssp             TS--TTHHHHHHHHT---TTCCCEEEESSCSHHHHHHHHHHSCTTCEEEEESSCCCC---CCSCEEEEECCGGGGGTSCB
T ss_pred             CC--chHHHHHHHHc---cCCccEEEECCCchHHHHHHHHHhhcCCCEEEEEecCccccccccccceeeeeeeeeccccc
Confidence            54  67877777764   456999999999988899999999 58999999985332      11111   123566788


Q ss_pred             EEEeecccC----------CcHHHHHHHHHcCCCCCCCceEEEecCChhhHHHHHHHHhcCCCceEEEE
Q 017868          305 DVVGVFRYK----------NTWPLCLELLRSGKIDVKPLVTHRFGFSQKEVEEAFETSARGGTAIKVMF  363 (365)
Q Consensus       305 ~i~~~~~~~----------~~~~~~~~~l~~g~~~~~~~~~~~~~~~~~~~~~a~~~~~~~~~~gk~vi  363 (365)
                      ++.+++...          +.++++++++++|++.+.+.+++.|+|  +++.+|++.+.+++..||.|+
T Consensus       291 ~~~g~~~~~~~~~~~~~~~~~~~~~~~l~~~g~l~~~~~~~~~~~l--~~~~~A~~~l~~g~~~Gkkvv  357 (371)
T 3gqv_A          291 TWPAPYGRPGSEEERQFGEDLWRIAGQLVEDGRLVHHPLRVVQGGF--DHIKQGMELVRKGELSGEKLV  357 (371)
T ss_dssp             SCSTTTCBCCCHHHHHHHHHHHHHHHHHHHTTSSCCCCEEEEEECH--HHHHHHHHHHHTTCCSSCEEE
T ss_pred             cccccccccccHHHHHHHHHHHHHHHHHHHCCeeeCCcCeecCCcH--HHHHHHHHHHHcCCCceEEEE
Confidence            887764331          234588899999999877777777888  999999999999988885443

>3fbg_A Putative arginate lyase; structural genomics, unknown function, PSI-2, protein structure initiative; 1.60A {Staphylococcus haemolyticus}

Probab=100.00  E-value=1.2e-48  Score=357.52  Aligned_cols=306  Identities=19%  Similarity=0.227  Sum_probs=263.0

Q ss_pred             hcceeEEEec------CCceEEEEecCCCCCCCcEEEEEeeeeeCcccHhhhhccccCCccCCCCcccCccceEEEEEeC
Q 017868           16 EVNMAAWLLG------VNTLKIQPFELPSLGPYDVLVRMKAVGICGSDVHYLKTLRCADFVVKEPMVIGHECAGVIEKVG   89 (365)
Q Consensus        16 ~~~~~~~~~~------~~~l~~~~~~~p~~~~~eVlI~v~~~~l~~~D~~~~~g~~~~~~~~~~p~~~G~e~~G~V~~vG   89 (365)
                      ++|||+++..      ++.+++.++|.|+|+++||+|||.++++|++|++.+.|.     ...+|.++|||++|+|+++|
T Consensus         1 m~MkA~~~~~~G~~~~~~~l~~~~~~~P~~~~~eVlVkv~a~gi~~~D~~~~~g~-----~~~~p~i~G~e~~G~V~~vG   75 (346)
T 3fbg_A            1 MSLKAIGFEQPFKLSDGNLFKTFNLDIPEPKVHEILVKIQSISVNPVDTKQRLMD-----VSKAPRVLGFDAIGVVESVG   75 (346)
T ss_dssp             -CEEEEEBSSCCCGGGCCCCEEEEECCCCCCTTEEEEEEEEEEECHHHHHHTTSC-----CSSSCBCCCCCEEEEEEEEC
T ss_pred             CCcEEEEEEeccccCCCceeEeccccCCCCCCCEEEEEEEEEEcCHHHHHHHhCC-----CCCCCcCcCCccEEEEEEeC
Confidence            3689999884      468999999999999999999999999999999988764     24679999999999999999


Q ss_pred             CCCCCCCCCCEEEEcCCcCCCCCccccCCCCCCCCCccccccCCCCcceeeEEeecCCceEECCCCCCcchhccch-hhH
Q 017868           90 SEVKTLVPGDRVALEPGISCWRCDHCKGGRYNLCPEMKFFATPPVHGSLANQVVHPADLCFKLPDNVSLEEGAMCE-PLS  168 (365)
Q Consensus        90 ~~v~~~~~Gd~V~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~v~~~~~~~iP~~~~~~~a~~~~-~~~  168 (365)
                      ++|++|++||||++...                         ....|+|+||++++++.++++|+++++++|+.++ ...
T Consensus        76 ~~v~~~~~GdrV~~~~~-------------------------~~~~G~~aey~~v~~~~~~~iP~~~~~~~aa~~~~~~~  130 (346)
T 3fbg_A           76 NEVTMFNQGDIVYYSGS-------------------------PDQNGSNAEYQLINERLVAKAPKNISAEQAVSLPLTGI  130 (346)
T ss_dssp             TTCCSCCTTCEEEECCC-------------------------TTSCCSSBSEEEEEGGGEEECCSSSCHHHHTTSHHHHH
T ss_pred             CCCCcCCCCCEEEEcCC-------------------------CCCCcceeEEEEEChHHeEECCCCCCHHHhhhcchhHH
Confidence            99999999999987521                         1246999999999999999999999999999887 667


Q ss_pred             HHHHHH-HhcCCC------CCCEEEEEc-CCHHHHHHHHHHHHHCCCCeEEEEeCChhHHHHHHHcCCCEEEeCCCCccc
Q 017868          169 VGLHAC-RRANIG------PETNVLIMG-AGPIGLVTMLGAPRAFGAPRIVIVDVDDYRLSVAKEIGADNIVKVSTNLQD  240 (365)
Q Consensus       169 ~a~~~~-~~~~~~------~g~~vlI~G-~g~~G~~ai~~l~~~~g~~~vi~v~~~~~~~~~~~~~g~~~~~~~~~~~~~  240 (365)
                      |||+++ +.++++      +|++|||+| +|++|++++| +++..|+ +|+++++++++.++++++|++.++++.   ++
T Consensus       131 ta~~~l~~~~~~~~~~~~~~g~~VlV~gg~G~vG~~a~q-la~~~Ga-~Vi~~~~~~~~~~~~~~lGa~~vi~~~---~~  205 (346)
T 3fbg_A          131 TAYETLFDVFGISRNRNENEGKTLLIINGAGGVGSIATQ-IAKAYGL-RVITTASRNETIEWTKKMGADIVLNHK---ES  205 (346)
T ss_dssp             HHHHHHHTTSCCCSSHHHHTTCEEEEESTTSHHHHHHHH-HHHHTTC-EEEEECCSHHHHHHHHHHTCSEEECTT---SC
T ss_pred             HHHHHHHHhcCCccccccCCCCEEEEEcCCCHHHHHHHH-HHHHcCC-EEEEEeCCHHHHHHHHhcCCcEEEECC---cc
Confidence            899998 468888      999999995 5999999999 9999999 799999999999999999999998764   36


Q ss_pred             HHHHHHHHHHHhCCCceEEEeCCCCHHHHHHHHHhcccCCEEEEEccCCCCccccchHhhhcCcEEEeeccc--------
Q 017868          241 IAEEVEKIQKAMGTGIDVSFDCAGLNKTMSTALGATCAGGKVCLVGMGHHEMTVPLTPAAVREVDVVGVFRY--------  312 (365)
Q Consensus       241 ~~~~i~~~~~~~~~~~d~vid~~g~~~~~~~~~~~l~~~G~~~~~g~~~~~~~~~~~~~~~~~~~i~~~~~~--------  312 (365)
                      +.+.+++.   .++++|++|||+|....+..++++|+++|+++.++..  ...++...+..+++++.+.+.+        
T Consensus       206 ~~~~~~~~---~~~g~Dvv~d~~g~~~~~~~~~~~l~~~G~iv~~~~~--~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  280 (346)
T 3fbg_A          206 LLNQFKTQ---GIELVDYVFCTFNTDMYYDDMIQLVKPRGHIATIVAF--ENDQDLNALKPKSLSFSHEFMFARPLNQTD  280 (346)
T ss_dssp             HHHHHHHH---TCCCEEEEEESSCHHHHHHHHHHHEEEEEEEEESSCC--SSCBCGGGGTTTTCEEEECCTTHHHHTTCT
T ss_pred             HHHHHHHh---CCCCccEEEECCCchHHHHHHHHHhccCCEEEEECCC--CCCCccccccccceEEEEEEEecccccchh
Confidence            66666654   4679999999999877789999999999999988643  2344555677788999886543        


Q ss_pred             -----CCcHHHHHHHHHcCCCCCCCceEEEe---cCChhhHHHHHHHHhcCCCceEEEEeC
Q 017868          313 -----KNTWPLCLELLRSGKIDVKPLVTHRF---GFSQKEVEEAFETSARGGTAIKVMFNL  365 (365)
Q Consensus       313 -----~~~~~~~~~~l~~g~~~~~~~~~~~~---~~~~~~~~~a~~~~~~~~~~gk~vi~~  365 (365)
                           .+.++++++++++|++  ++.++++|   ++  +++.+|++.+.+++..||+|+++
T Consensus       281 ~~~~~~~~~~~~~~l~~~g~l--~~~i~~~~~~~~l--~~~~~A~~~~~~g~~~GKvvl~~  337 (346)
T 3fbg_A          281 DMIKHHEYLEDITNKVEQNIY--QPTTTKVIEGLTT--ENIYQAHQILESNTMIGKLVINL  337 (346)
T ss_dssp             TTHHHHHHHHHHHHHHHTTSS--CCCEEEEEESCCH--HHHHHHHHHHHTTCCCSEEEEEC
T ss_pred             hHHHHHHHHHHHHHHHHCCCE--ECCccceecCCCH--HHHHHHHHHHhcCCcceEEEEec
Confidence                 1347889999999998  67788887   56  99999999999999999999974

>3gms_A Putative NADPH:quinone reductase; structural genomics, putative quinone oxidoreductase, unknown function, PSI-2; 1.76A {Bacillus thuringiensis}

Probab=100.00  E-value=2.1e-48  Score=355.36  Aligned_cols=310  Identities=18%  Similarity=0.217  Sum_probs=257.7

Q ss_pred             hhcceeEEEecCCc----eEEEEecCCCCCCCcEEEEEeeeeeCcccHhhhhccccCCccCCCCcccCccceEEEEEeCC
Q 017868           15 EEVNMAAWLLGVNT----LKIQPFELPSLGPYDVLVRMKAVGICGSDVHYLKTLRCADFVVKEPMVIGHECAGVIEKVGS   90 (365)
Q Consensus        15 ~~~~~~~~~~~~~~----l~~~~~~~p~~~~~eVlI~v~~~~l~~~D~~~~~g~~~~~~~~~~p~~~G~e~~G~V~~vG~   90 (365)
                      +++||++++.+.+.    +++.++|.|+|+++||+|||.+++||++|++.+.|.+..  ...+|.++|||++|+|+++|+
T Consensus         2 ~~~mka~~~~~~g~p~~~l~~~~~~~P~~~~~eVlVkv~a~gi~~~D~~~~~g~~~~--~~~~p~i~G~E~~G~V~~vG~   79 (340)
T 3gms_A            2 SLHGKLIQFHKFGNPKDVLQVEYKNIEPLKDNEVFVRMLVRPINPSDLIPITGAYAH--RIPLPNIPGYEGVGIVENVGA   79 (340)
T ss_dssp             CCEEEEEEESSCSCHHHHEEEEEEECCCCCTTEEEEEEEEEECCHHHHGGGGTTTTT--TSCSSBCCCSCCEEEEEEECT
T ss_pred             CcccEEEEEecCCCchheEEEEecCCCCCCCCEEEEEEEEecCCHHHHHHhcCCCCC--CCCCCCcCCcceEEEEEEeCC
Confidence            35799999987643    899999999999999999999999999999998875432  246799999999999999999


Q ss_pred             CCCCCCCCCEEEEcCCcCCCCCccccCCCCCCCCCccccccCCCCcceeeEEeecCCceEECCCCCCcchhccch-hhHH
Q 017868           91 EVKTLVPGDRVALEPGISCWRCDHCKGGRYNLCPEMKFFATPPVHGSLANQVVHPADLCFKLPDNVSLEEGAMCE-PLSV  169 (365)
Q Consensus        91 ~v~~~~~Gd~V~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~v~~~~~~~iP~~~~~~~a~~~~-~~~~  169 (365)
                      +|++|++||||+++                            ..+|+|+||+++++++++++|+++++++|+.++ ...|
T Consensus        80 ~v~~~~vGdrV~~~----------------------------~~~G~~aey~~v~~~~~~~vP~~l~~~~aa~l~~~~~t  131 (340)
T 3gms_A           80 FVSRELIGKRVLPL----------------------------RGEGTWQEYVKTSADFVVPIPDSIDDFTAAQMYINPLT  131 (340)
T ss_dssp             TSCGGGTTCEEEEC----------------------------SSSCSSBSEEEEEGGGEEECCTTSCHHHHTTSSHHHHH
T ss_pred             CCCCCCCCCEEEec----------------------------CCCccceeEEEcCHHHeEECCCCCCHHHHhhhcchHHH
Confidence            99999999999875                            245999999999999999999999999999875 7778


Q ss_pred             HHHHH-HhcCCCCCCEEEEEcC-CHHHHHHHHHHHHHCCCCeEEEEeCChhHHHHHHHcCCCEEEeCCCCcccHHHHHHH
Q 017868          170 GLHAC-RRANIGPETNVLIMGA-GPIGLVTMLGAPRAFGAPRIVIVDVDDYRLSVAKEIGADNIVKVSTNLQDIAEEVEK  247 (365)
Q Consensus       170 a~~~~-~~~~~~~g~~vlI~G~-g~~G~~ai~~l~~~~g~~~vi~v~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~i~~  247 (365)
                      ||+++ +.+++++|++|||+|+ |++|++++| +++..|+ +|+++++++++.++++++|++.++++..  .++.+.+++
T Consensus       132 a~~~~~~~~~~~~g~~VlV~Ga~g~iG~~~~~-~a~~~Ga-~Vi~~~~~~~~~~~~~~lga~~~~~~~~--~~~~~~~~~  207 (340)
T 3gms_A          132 AWVTCTETLNLQRNDVLLVNACGSAIGHLFAQ-LSQILNF-RLIAVTRNNKHTEELLRLGAAYVIDTST--APLYETVME  207 (340)
T ss_dssp             HHHHHHTTSCCCTTCEEEESSTTSHHHHHHHH-HHHHHTC-EEEEEESSSTTHHHHHHHTCSEEEETTT--SCHHHHHHH
T ss_pred             HHHHHHHhcccCCCCEEEEeCCccHHHHHHHH-HHHHcCC-EEEEEeCCHHHHHHHHhCCCcEEEeCCc--ccHHHHHHH
Confidence            88887 6789999999999998 699999999 8899999 7888889999999999999999888643  677777777


Q ss_pred             HHHHhCCCceEEEeCCCCHHHHHHHHHhcccCCEEEEEccCCCCccccchHhh-hcCcEEEeecc-----------cCCc
Q 017868          248 IQKAMGTGIDVSFDCAGLNKTMSTALGATCAGGKVCLVGMGHHEMTVPLTPAA-VREVDVVGVFR-----------YKNT  315 (365)
Q Consensus       248 ~~~~~~~~~d~vid~~g~~~~~~~~~~~l~~~G~~~~~g~~~~~~~~~~~~~~-~~~~~i~~~~~-----------~~~~  315 (365)
                      .+.  +.++|++|||+|.. .....+++|+++|+++.+|..... ..+...+. ...+++.....           ..+.
T Consensus       208 ~~~--~~g~Dvvid~~g~~-~~~~~~~~l~~~G~iv~~G~~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  283 (340)
T 3gms_A          208 LTN--GIGADAAIDSIGGP-DGNELAFSLRPNGHFLTIGLLSGI-QVNWAEIVTKAKVHANIFHLRHWNDEVSPYKWQET  283 (340)
T ss_dssp             HTT--TSCEEEEEESSCHH-HHHHHHHTEEEEEEEEECCCTTSC-CCCHHHHHHTSCCEEEECCHHHHHHHSCHHHHHHH
T ss_pred             HhC--CCCCcEEEECCCCh-hHHHHHHHhcCCCEEEEEeecCCC-CCCHHHhhhcccceEEEEEehhhhhhcCHHHHHHH
Confidence            643  56999999999976 456677999999999999865432 22222222 24445444321           1357


Q ss_pred             HHHHHHHHHcCCCCCCCceEEEecCChhhHHHHHHHHhcCCC-ceEEEEeC
Q 017868          316 WPLCLELLRSGKIDVKPLVTHRFGFSQKEVEEAFETSARGGT-AIKVMFNL  365 (365)
Q Consensus       316 ~~~~~~~l~~g~~~~~~~~~~~~~~~~~~~~~a~~~~~~~~~-~gk~vi~~  365 (365)
                      ++++++++++|++.+.+ ++++|++  +++.+|++.+++++. .||+++++
T Consensus       284 ~~~~~~l~~~g~l~~~~-i~~~~~l--~~~~~A~~~~~~~~~~~GKvvl~~  331 (340)
T 3gms_A          284 FRHLIRLVENEQLRFMK-VHSTYEL--ADVKAAVDVVQSAEKTKGKVFLTS  331 (340)
T ss_dssp             HHHHHHHHHTTSSCCCC-EEEEEEG--GGHHHHHHHHHCTTCCSSEEEEEC
T ss_pred             HHHHHHHHHcCCCcccc-ccEEEeH--HHHHHHHHHHHhcCCCCCeEEEEE
Confidence            88999999999996544 7899999  999999999999874 59999974

>3goh_A Alcohol dehydrogenase, zinc-containing; NP_718042.1, alcohol dehydrogenase superfamily protein, ALCO dehydrogenase groes-like domain; 1.55A {Shewanella oneidensis}

Probab=100.00  E-value=1e-49  Score=360.35  Aligned_cols=299  Identities=23%  Similarity=0.311  Sum_probs=242.1

Q ss_pred             hhcceeEEEe-cCCceEEEEecCCCCCCCcEEEEEeeeeeCcccHhhhhccccCCccCCCCcccCccceEEEEEeCCCCC
Q 017868           15 EEVNMAAWLL-GVNTLKIQPFELPSLGPYDVLVRMKAVGICGSDVHYLKTLRCADFVVKEPMVIGHECAGVIEKVGSEVK   93 (365)
Q Consensus        15 ~~~~~~~~~~-~~~~l~~~~~~~p~~~~~eVlI~v~~~~l~~~D~~~~~g~~~~~~~~~~p~~~G~e~~G~V~~vG~~v~   93 (365)
                      |.+||++++. +++.+++.++|.|+|+++||+|||.++++|++|++.+.|.+..   ..+|.++|||++|+|+++|++|+
T Consensus         2 M~tMka~~~~~~~~~l~~~~~~~P~~~~~eVlVkv~a~gi~~~D~~~~~g~~~~---~~~p~i~G~e~~G~V~~vG~~v~   78 (315)
T 3goh_A            2 MEQHQVWAYQTKTHSVTLNSVDIPALAADDILVQNQAIGINPVDWKFIKANPIN---WSNGHVPGVDGAGVIVKVGAKVD   78 (315)
T ss_dssp             CCEEEEEEEETTTTEEEEEEEECCCCCTTEEEEEEEEEEECHHHHHHHHHCTTC---CCTTCCCCSEEEEEEEEECTTSC
T ss_pred             CcceEEEEEeCCCCeeEEEecCCCCCCCCEEEEEEEEEecCHHHHHHHcCCCCc---CCCCCEeeeeeEEEEEEeCCCCC
Confidence            3569999999 6889999999999999999999999999999999999885432   46799999999999999999999


Q ss_pred             CCCCCCEEEEcCCcCCCCCccccCCCCCCCCCccccccCCCCcceeeEEeecCCceEECCCCCCcchhccch-hhHHHHH
Q 017868           94 TLVPGDRVALEPGISCWRCDHCKGGRYNLCPEMKFFATPPVHGSLANQVVHPADLCFKLPDNVSLEEGAMCE-PLSVGLH  172 (365)
Q Consensus        94 ~~~~Gd~V~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~v~~~~~~~iP~~~~~~~a~~~~-~~~~a~~  172 (365)
                      +|++||||++.+.                         ...+|+|+||+++++++++++|+++++++|+.++ +++|||+
T Consensus        79 ~~~vGdrV~~~~~-------------------------~~~~G~~aey~~v~~~~~~~iP~~~~~~~aa~l~~~~~ta~~  133 (315)
T 3goh_A           79 SKMLGRRVAYHTS-------------------------LKRHGSFAEFTVLNTDRVMTLPDNLSFERAAALPCPLLTAWQ  133 (315)
T ss_dssp             GGGTTCEEEEECC-------------------------TTSCCSSBSEEEEETTSEEECCTTSCHHHHHTSHHHHHHHHH
T ss_pred             CCCCCCEEEEeCC-------------------------CCCCcccccEEEEcHHHhccCcCCCCHHHHhhCccHHHHHHH
Confidence            9999999998642                         1246999999999999999999999999998775 8999999


Q ss_pred             HHHhcCCCCCCEEEEEcCCHHHHHHHHHHHHHCCCCeEEEEeCChhHHHHHHHcCCCEEEeCCCCcccHHHHHHHHHHHh
Q 017868          173 ACRRANIGPETNVLIMGAGPIGLVTMLGAPRAFGAPRIVIVDVDDYRLSVAKEIGADNIVKVSTNLQDIAEEVEKIQKAM  252 (365)
Q Consensus       173 ~~~~~~~~~g~~vlI~G~g~~G~~ai~~l~~~~g~~~vi~v~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~i~~~~~~~  252 (365)
                      +++.+++++|++|||+|+|++|++++| +++..|+ +|++++ +++|.++++++|++.+++      + .+.+       
T Consensus       134 al~~~~~~~g~~VlV~GaG~vG~~a~q-lak~~Ga-~Vi~~~-~~~~~~~~~~lGa~~v~~------d-~~~v-------  196 (315)
T 3goh_A          134 AFEKIPLTKQREVLIVGFGAVNNLLTQ-MLNNAGY-VVDLVS-ASLSQALAAKRGVRHLYR------E-PSQV-------  196 (315)
T ss_dssp             HHTTSCCCSCCEEEEECCSHHHHHHHH-HHHHHTC-EEEEEC-SSCCHHHHHHHTEEEEES------S-GGGC-------
T ss_pred             HHhhcCCCCCCEEEEECCCHHHHHHHH-HHHHcCC-EEEEEE-ChhhHHHHHHcCCCEEEc------C-HHHh-------
Confidence            998889999999999999999999999 9999999 788888 899999999999988773      1 1122       


Q ss_pred             CCCceEEEeCCCCHHHHHHHHHhcccCCEEEEEccCCCCccc--cchHhhhcCcEEEeeccc---------CCcHHHHHH
Q 017868          253 GTGIDVSFDCAGLNKTMSTALGATCAGGKVCLVGMGHHEMTV--PLTPAAVREVDVVGVFRY---------KNTWPLCLE  321 (365)
Q Consensus       253 ~~~~d~vid~~g~~~~~~~~~~~l~~~G~~~~~g~~~~~~~~--~~~~~~~~~~~i~~~~~~---------~~~~~~~~~  321 (365)
                      +.++|+||||+|.+ .+..++++|+++|+++.++........  ....+.++++++.+++.+         .+.++++++
T Consensus       197 ~~g~Dvv~d~~g~~-~~~~~~~~l~~~G~~v~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  275 (315)
T 3goh_A          197 TQKYFAIFDAVNSQ-NAAALVPSLKANGHIICIQDRIPAPIDPAFTRTISYHEIALGALHDFGDRQDWQILMQQGEALLT  275 (315)
T ss_dssp             CSCEEEEECC--------TTGGGEEEEEEEEEECCC----------CCSEEEEECGGGHHHHCCHHHHHHHHHHHHHHHH
T ss_pred             CCCccEEEECCCch-hHHHHHHHhcCCCEEEEEeCCCCccccchhhhcceeeEEEeecccccCChhHHHHHHHHHHHHHH
Confidence            67999999999976 558899999999999999753321111  111223333333333321         124678999


Q ss_pred             HHHcCCCCCCCceEEEecCChhhHHHHHHHHhcCCCceEEEEeC
Q 017868          322 LLRSGKIDVKPLVTHRFGFSQKEVEEAFETSARGGTAIKVMFNL  365 (365)
Q Consensus       322 ~l~~g~~~~~~~~~~~~~~~~~~~~~a~~~~~~~~~~gk~vi~~  365 (365)
                      ++++|++  ++.++++|+|  +++.+|++.+.  ...||+|+++
T Consensus       276 l~~~g~l--~~~i~~~~~l--~~~~~A~~~~~--~~~gKvvi~~  313 (315)
T 3goh_A          276 LIAQGKM--EIAAPDIFRF--EQMIEALDHSE--QTKLKTVLTL  313 (315)
T ss_dssp             HHHTTSS--CCCCCEEEEG--GGHHHHHHHHH--HHCCCEEEES
T ss_pred             HHHCCCc--ccccceEecH--HHHHHHHHHHH--hcCCcEEEEe
Confidence            9999998  6788899999  99999999988  6788999975

>4a27_A Synaptic vesicle membrane protein VAT-1 homolog-L; oxidoreductase; 2.10A {Homo sapiens}

Probab=100.00  E-value=2.3e-48  Score=356.14  Aligned_cols=306  Identities=22%  Similarity=0.296  Sum_probs=254.5

Q ss_pred             hcceeEEEecCC---ceEEEEecCCCCCCCcEEEEEeeeeeCcccHhhhhccccCCccCCCCcccCccceEEEEEeCCCC
Q 017868           16 EVNMAAWLLGVN---TLKIQPFELPSLGPYDVLVRMKAVGICGSDVHYLKTLRCADFVVKEPMVIGHECAGVIEKVGSEV   92 (365)
Q Consensus        16 ~~~~~~~~~~~~---~l~~~~~~~p~~~~~eVlI~v~~~~l~~~D~~~~~g~~~~~~~~~~p~~~G~e~~G~V~~vG~~v   92 (365)
                      ++||++++.+++   .+++.++|.|+|+++||+|||.++++|++|++.+.|.+..  ...+|.++|||++|+|+++|++|
T Consensus         2 m~mka~~~~~~g~~~~l~~~~~~~p~~~~~eVlVkv~a~gi~~~D~~~~~g~~~~--~~~~p~v~G~e~~G~V~~vG~~v   79 (349)
T 4a27_A            2 MEMRAVVLAGFGGLNKLRLFRKAMPEPQDGELKIRVKACGLNFIDLMVRQGNIDN--PPKTPLVPGFECSGIVEALGDSV   79 (349)
T ss_dssp             CCEEEEEECSSSSGGGEEEEEECCCCCCTTEEEEEEEEEEECHHHHHHHHTCSSS--CCCSSBCCCSEEEEEEEEECTTC
T ss_pred             ceeEEEEEccCCCcceeEEEecCCCCCCCCEEEEEEEEEecCHHHHHHhCCCcCC--CCCCCccccceeEEEEEEeCCCC
Confidence            469999999764   7999999999999999999999999999999999876432  24679999999999999999999


Q ss_pred             CCCCCCCEEEEcCCcCCCCCccccCCCCCCCCCccccccCCCCcceeeEEeecCCceEECCCCCCcchhccch-hhHHHH
Q 017868           93 KTLVPGDRVALEPGISCWRCDHCKGGRYNLCPEMKFFATPPVHGSLANQVVHPADLCFKLPDNVSLEEGAMCE-PLSVGL  171 (365)
Q Consensus        93 ~~~~~Gd~V~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~v~~~~~~~iP~~~~~~~a~~~~-~~~~a~  171 (365)
                      ++|++||||+++.                            .+|+|+||+.+++++++++|+++++++|+.++ ++.|||
T Consensus        80 ~~~~~GdrV~~~~----------------------------~~G~~aey~~v~~~~~~~iP~~~~~~~aa~l~~~~~ta~  131 (349)
T 4a27_A           80 KGYEIGDRVMAFV----------------------------NYNAWAEVVCTPVEFVYKIPDDMSFSEAAAFPMNFVTAY  131 (349)
T ss_dssp             CSCCTTCEEEEEC----------------------------SSCCSBSEEEEEGGGEEECCTTSCHHHHHTSHHHHHHHH
T ss_pred             CCCCCCCEEEEec----------------------------CCCcceEEEEecHHHeEECCCCCCHHHHHHHHHHHHHHH
Confidence            9999999998862                            35999999999999999999999999999887 788999


Q ss_pred             HHH-HhcCCCCCCEEEEEcC-CHHHHHHHHHHHHHCCCCeEEEEeCChhHHHHHHHcCCCEEEeCCCCcccHHHHHHHHH
Q 017868          172 HAC-RRANIGPETNVLIMGA-GPIGLVTMLGAPRAFGAPRIVIVDVDDYRLSVAKEIGADNIVKVSTNLQDIAEEVEKIQ  249 (365)
Q Consensus       172 ~~~-~~~~~~~g~~vlI~G~-g~~G~~ai~~l~~~~g~~~vi~v~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~i~~~~  249 (365)
                      +++ +.+++++|++|||+|+ |++|++++| +++..|..+|++++ ++++.+.++ +|++.+++   ...++.+.+++. 
T Consensus       132 ~~l~~~~~~~~g~~VlV~Ga~G~vG~~a~q-la~~~g~~~V~~~~-~~~~~~~~~-~ga~~~~~---~~~~~~~~~~~~-  204 (349)
T 4a27_A          132 VMLFEVANLREGMSVLVHSAGGGVGQAVAQ-LCSTVPNVTVFGTA-STFKHEAIK-DSVTHLFD---RNADYVQEVKRI-  204 (349)
T ss_dssp             HHHHTTSCCCTTCEEEESSTTSHHHHHHHH-HHTTSTTCEEEEEE-CGGGHHHHG-GGSSEEEE---TTSCHHHHHHHH-
T ss_pred             HHHHHhcCCCCCCEEEEEcCCcHHHHHHHH-HHHHcCCcEEEEeC-CHHHHHHHH-cCCcEEEc---CCccHHHHHHHh-
Confidence            998 5689999999999998 999999999 98888765777776 677888888 99999887   336777777765 


Q ss_pred             HHhCCCceEEEeCCCCHHHHHHHHHhcccCCEEEEEccCCCC-----------------ccccchHhhhcCcEEEeeccc
Q 017868          250 KAMGTGIDVSFDCAGLNKTMSTALGATCAGGKVCLVGMGHHE-----------------MTVPLTPAAVREVDVVGVFRY  312 (365)
Q Consensus       250 ~~~~~~~d~vid~~g~~~~~~~~~~~l~~~G~~~~~g~~~~~-----------------~~~~~~~~~~~~~~i~~~~~~  312 (365)
                        .++++|+||||+|.+ .+..++++|+++|+++.+|.....                 ...+...++.++.++.++...
T Consensus       205 --~~~g~Dvv~d~~g~~-~~~~~~~~l~~~G~~v~~G~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~i~g~~~~  281 (349)
T 4a27_A          205 --SAEGVDIVLDCLCGD-NTGKGLSLLKPLGTYILYGSSNMVTGETKSFFSFAKSWWQVEKVNPIKLYEENKVIAGFSLL  281 (349)
T ss_dssp             --CTTCEEEEEEECC--------CTTEEEEEEEEEEC-------------------------CHHHHHHHTCEEEEECHH
T ss_pred             --cCCCceEEEECCCch-hHHHHHHHhhcCCEEEEECCCcccccccccccccccccccccccCHHHHhhcCceEEEEeeh
Confidence              367999999999976 558899999999999999854211                 113344567788888887542


Q ss_pred             ------------CCcHHHHHHHHHcCCCCCCCceEEEecCChhhHHHHHHHHhcCCCceEEEEeC
Q 017868          313 ------------KNTWPLCLELLRSGKIDVKPLVTHRFGFSQKEVEEAFETSARGGTAIKVMFNL  365 (365)
Q Consensus       313 ------------~~~~~~~~~~l~~g~~~~~~~~~~~~~~~~~~~~~a~~~~~~~~~~gk~vi~~  365 (365)
                                  .+.++++++++++|++  ++.++++|++  +++.+|++.+.+++..||+||++
T Consensus       282 ~~~~~~~~~~~~~~~~~~~~~l~~~g~l--~~~i~~~~~l--~~~~~A~~~l~~~~~~GKvvi~~  342 (349)
T 4a27_A          282 NLLFKQGRAGLIRGVVEKLIGLYNQKKI--KPVVDSLWAL--EEVKEAMQRIHDRGNIGKLILDV  342 (349)
T ss_dssp             HHHHTSCCHHHHHHHHHHHHHHHHTTSC--CCCEEEEECG--GGHHHHHHHHHTTCCSSEEEEET
T ss_pred             heeccccchHHHHHHHHHHHHHHHCCCc--cccccceECH--HHHHHHHHHHHhCCCCceEEEec
Confidence                        3568899999999999  7888999999  99999999999999999999974

>2j8z_A Quinone oxidoreductase; medium-chain dehydrogenase- reductases, QUIN oxidoreductase, oxidative stress response; HET: NAP; 2.50A {Homo sapiens} PDB: 2oby_A*

Probab=100.00  E-value=6.5e-48  Score=353.70  Aligned_cols=318  Identities=18%  Similarity=0.247  Sum_probs=261.2

Q ss_pred             cccccchhcceeEEEecCC---ceEEEEecCCCCCCCcEEEEEeeeeeCcccHhhhhccccCCccCCCCcccCccceEEE
Q 017868            9 GEKEDGEEVNMAAWLLGVN---TLKIQPFELPSLGPYDVLVRMKAVGICGSDVHYLKTLRCADFVVKEPMVIGHECAGVI   85 (365)
Q Consensus         9 ~~~~~~~~~~~~~~~~~~~---~l~~~~~~~p~~~~~eVlI~v~~~~l~~~D~~~~~g~~~~~~~~~~p~~~G~e~~G~V   85 (365)
                      +.+..++.+||++++.+++   .+++.++|.|+|+++||+|||.++++|++|++...|.+..  ...+|.++|||++|+|
T Consensus        14 ~~~~~~~~~Mka~~~~~~g~~~~l~~~~~~~P~~~~~eVlVkv~a~gi~~~D~~~~~G~~~~--~~~~p~v~G~E~~G~V   91 (354)
T 2j8z_A           14 GTENLYFQSMLAVHFDKPGGPENLYVKEVAKPSPGEGEVLLKVAASALNRADLMQRQGQYDP--PPGASNILGLEASGHV   91 (354)
T ss_dssp             -------CEEEEEEESSCSSGGGEEEEEEECCCCCTTEEEEEEEEEECCHHHHHHHHTSSCC--CTTSCSSSCSEEEEEE
T ss_pred             cccccchhheeEEEEccCCCccceEEeecCCCCCCCCeEEEEEEEeecCHHHHHHhCCCCCC--CCCCCcccceeeEEEE
Confidence            4456678889999998654   6999999999999999999999999999999998875422  1356899999999999


Q ss_pred             EEeCCCC-CCCCCCCEEEEcCCcCCCCCccccCCCCCCCCCccccccCCCCcceeeEEeecCCceEECCCCCCcchhccc
Q 017868           86 EKVGSEV-KTLVPGDRVALEPGISCWRCDHCKGGRYNLCPEMKFFATPPVHGSLANQVVHPADLCFKLPDNVSLEEGAMC  164 (365)
Q Consensus        86 ~~vG~~v-~~~~~Gd~V~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~v~~~~~~~iP~~~~~~~a~~~  164 (365)
                      +++|++| ++|++||||+++.                            ..|+|+||+++++++++++|+++++++|+.+
T Consensus        92 ~~vG~~v~~~~~vGdrV~~~~----------------------------~~G~~aey~~v~~~~~~~iP~~ls~~~aa~l  143 (354)
T 2j8z_A           92 AELGPGCQGHWKIGDTAMALL----------------------------PGGGQAQYVTVPEGLLMPIPEGLTLTQAAAI  143 (354)
T ss_dssp             EEECSCC--CCCTTCEEEEEC----------------------------SSCCSBSEEEEEGGGEEECCTTCCHHHHTTS
T ss_pred             EEECCCcCCCCCCCCEEEEec----------------------------CCCcceeEEEeCHHHcEECCCCCCHHHHHhc
Confidence            9999999 9999999998752                            3499999999999999999999999999877


Q ss_pred             h-hhHHHHHHH-HhcCCCCCCEEEEEcC-CHHHHHHHHHHHHHCCCCeEEEEeCChhHHHHHHHcCCCEEEeCCCCcccH
Q 017868          165 E-PLSVGLHAC-RRANIGPETNVLIMGA-GPIGLVTMLGAPRAFGAPRIVIVDVDDYRLSVAKEIGADNIVKVSTNLQDI  241 (365)
Q Consensus       165 ~-~~~~a~~~~-~~~~~~~g~~vlI~G~-g~~G~~ai~~l~~~~g~~~vi~v~~~~~~~~~~~~~g~~~~~~~~~~~~~~  241 (365)
                      + ++.|||+++ +.+++++|++|||+|+ |++|++++| +++..|+ +|+++++++++.+.++++|++.++++..  .++
T Consensus       144 ~~~~~tA~~al~~~~~~~~g~~vlV~Ga~ggiG~~~~~-~a~~~Ga-~Vi~~~~~~~~~~~~~~~g~~~~~~~~~--~~~  219 (354)
T 2j8z_A          144 PEAWLTAFQLLHLVGNVQAGDYVLIHAGLSGVGTAAIQ-LTRMAGA-IPLVTAGSQKKLQMAEKLGAAAGFNYKK--EDF  219 (354)
T ss_dssp             HHHHHHHHHHHTTTSCCCTTCEEEESSTTSHHHHHHHH-HHHHTTC-EEEEEESCHHHHHHHHHHTCSEEEETTT--SCH
T ss_pred             cchHHHHHHHHHHhcCCCCCCEEEEECCccHHHHHHHH-HHHHcCC-EEEEEeCCHHHHHHHHHcCCcEEEecCC--hHH
Confidence            6 889999999 6789999999999985 999999999 8889999 6888889999999999999998887643  567


Q ss_pred             HHHHHHHHHHhCCCceEEEeCCCCHHHHHHHHHhcccCCEEEEEccCCCC-ccccc-hHhhhcCcEEEeecccCC-----
Q 017868          242 AEEVEKIQKAMGTGIDVSFDCAGLNKTMSTALGATCAGGKVCLVGMGHHE-MTVPL-TPAAVREVDVVGVFRYKN-----  314 (365)
Q Consensus       242 ~~~i~~~~~~~~~~~d~vid~~g~~~~~~~~~~~l~~~G~~~~~g~~~~~-~~~~~-~~~~~~~~~i~~~~~~~~-----  314 (365)
                      .+.+.+.+.  +.++|++||++|.. .+..++++|+++|+++.+|..... ..++. ..+..+++++.++.....     
T Consensus       220 ~~~~~~~~~--~~~~d~vi~~~G~~-~~~~~~~~l~~~G~iv~~G~~~~~~~~~~~~~~~~~~~~~i~g~~~~~~~~~~~  296 (354)
T 2j8z_A          220 SEATLKFTK--GAGVNLILDCIGGS-YWEKNVNCLALDGRWVLYGLMGGGDINGPLFSKLLFKRGSLITSLLRSRDNKYK  296 (354)
T ss_dssp             HHHHHHHTT--TSCEEEEEESSCGG-GHHHHHHHEEEEEEEEECCCTTCSCCCSCHHHHHHHTTCEEEECCSTTCCHHHH
T ss_pred             HHHHHHHhc--CCCceEEEECCCch-HHHHHHHhccCCCEEEEEeccCCCccCCChhHHHHhCCCEEEEEEccccccccc
Confidence            677666532  46899999999986 788999999999999999865432 34445 567789999999764321     


Q ss_pred             ------cHHHHHHHHHcC-CCCCCCceEEEecCChhhHHHHHHHHhcCCCceEEEEeC
Q 017868          315 ------TWPLCLELLRSG-KIDVKPLVTHRFGFSQKEVEEAFETSARGGTAIKVMFNL  365 (365)
Q Consensus       315 ------~~~~~~~~l~~g-~~~~~~~~~~~~~~~~~~~~~a~~~~~~~~~~gk~vi~~  365 (365)
                            .++++++++++| ++.+.+.++++|+|  +++.+|++.+.+++..||+|+++
T Consensus       297 ~~~~~~~~~~~~~l~~~g~~~~l~~~i~~~~~l--~~~~~A~~~~~~~~~~gKvvv~~  352 (354)
T 2j8z_A          297 QMLVNAFTEQILPHFSTEGPQRLLPVLDRIYPV--TEIQEAHKYMEANKNIGKIVLEL  352 (354)
T ss_dssp             HHHHHHHHHHTGGGGTC---CCCCCCEEEEEEG--GGHHHHHHHHHTTCCSSEEEEEC
T ss_pred             HHHHHHHHHHHHHHHHcCCCccccCccceEEcH--HHHHHHHHHHHhCCCCceEEEec
Confidence                  124578889999 33337889999999  99999999999888889999974

>3jyn_A Quinone oxidoreductase; rossmann fold, protein-NADPH complex; HET: NDP; 2.01A {Pseudomonas syringae PV} PDB: 3jyl_A*

Probab=100.00  E-value=8.4e-48  Score=349.14  Aligned_cols=307  Identities=27%  Similarity=0.278  Sum_probs=260.1

Q ss_pred             ceeEEEecC---CceEEEEecCCCCCCCcEEEEEeeeeeCcccHhhhhccccCCccCCCCcccCccceEEEEEeCCCCCC
Q 017868           18 NMAAWLLGV---NTLKIQPFELPSLGPYDVLVRMKAVGICGSDVHYLKTLRCADFVVKEPMVIGHECAGVIEKVGSEVKT   94 (365)
Q Consensus        18 ~~~~~~~~~---~~l~~~~~~~p~~~~~eVlI~v~~~~l~~~D~~~~~g~~~~~~~~~~p~~~G~e~~G~V~~vG~~v~~   94 (365)
                      ||++++..+   +.++++++|.|+|+++||+|||.++++|++|++...|.+..   ..+|.++|||++|+|+++|++|++
T Consensus         2 MkA~~~~~~g~~~~l~~~~~~~p~~~~~eVlVkv~a~gi~~~D~~~~~g~~~~---~~~p~v~G~e~~G~V~~vG~~v~~   78 (325)
T 3jyn_A            2 AKRIQFSTVGGPEVLEYVDFEPEAPGPQAVVVRNKAIGLNFIDTYYRSGLYPA---PFLPSGLGAEGAGVVEAVGDEVTR   78 (325)
T ss_dssp             EEEEEBSSCSSGGGCEEEEECCCCCCTTEEEEEEEEEECCHHHHHHHHTSSCC---SSSSBCCCCCEEEEEEEECTTCCS
T ss_pred             cEEEEEecCCCcceeEEeecCCCCCCCCEEEEEEEEEecCHHHHHHHCCCCCC---CCCCCCCCceeEEEEEEECCCCCC
Confidence            788888854   46999999999999999999999999999999998875432   367899999999999999999999


Q ss_pred             CCCCCEEEEcCCcCCCCCccccCCCCCCCCCccccccCCCCcceeeEEeecCCceEECCCCCCcchhccch-hhHHHHHH
Q 017868           95 LVPGDRVALEPGISCWRCDHCKGGRYNLCPEMKFFATPPVHGSLANQVVHPADLCFKLPDNVSLEEGAMCE-PLSVGLHA  173 (365)
Q Consensus        95 ~~~Gd~V~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~v~~~~~~~iP~~~~~~~a~~~~-~~~~a~~~  173 (365)
                      |++||||+...                           ...|+|+||+.+++++++++|+++++++|+.++ ...|||++
T Consensus        79 ~~~GdrV~~~~---------------------------~~~G~~aey~~v~~~~~~~~P~~~~~~~aa~l~~~~~ta~~~  131 (325)
T 3jyn_A           79 FKVGDRVAYGT---------------------------GPLGAYSEVHVLPEANLVKLADSVSFEQAAALMLKGLTVQYL  131 (325)
T ss_dssp             CCTTCEEEESS---------------------------SSSCCSBSEEEEEGGGEEECCTTSCHHHHHHHHHHHHHHHHH
T ss_pred             CCCCCEEEEec---------------------------CCCccccceEEecHHHeEECCCCCCHHHHhhhhhhHHHHHHH
Confidence            99999998752                           145999999999999999999999999999776 77788988


Q ss_pred             HH-hcCCCCCCEEEEEcC-CHHHHHHHHHHHHHCCCCeEEEEeCChhHHHHHHHcCCCEEEeCCCCcccHHHHHHHHHHH
Q 017868          174 CR-RANIGPETNVLIMGA-GPIGLVTMLGAPRAFGAPRIVIVDVDDYRLSVAKEIGADNIVKVSTNLQDIAEEVEKIQKA  251 (365)
Q Consensus       174 ~~-~~~~~~g~~vlI~G~-g~~G~~ai~~l~~~~g~~~vi~v~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~i~~~~~~  251 (365)
                      +. .+++++|++|||+|+ |++|++++| +++..|+ +|+++++++++.++++++|++.++++.  ..++.+.+++.+. 
T Consensus       132 l~~~~~~~~g~~VlV~Ga~g~iG~~~~~-~a~~~Ga-~Vi~~~~~~~~~~~~~~~Ga~~~~~~~--~~~~~~~~~~~~~-  206 (325)
T 3jyn_A          132 LRQTYQVKPGEIILFHAAAGGVGSLACQ-WAKALGA-KLIGTVSSPEKAAHAKALGAWETIDYS--HEDVAKRVLELTD-  206 (325)
T ss_dssp             HHTTSCCCTTCEEEESSTTSHHHHHHHH-HHHHHTC-EEEEEESSHHHHHHHHHHTCSEEEETT--TSCHHHHHHHHTT-
T ss_pred             HHHhcCCCCCCEEEEEcCCcHHHHHHHH-HHHHCCC-EEEEEeCCHHHHHHHHHcCCCEEEeCC--CccHHHHHHHHhC-
Confidence            85 578999999999985 999999999 8899999 688888999999999999999998864  3677777777643 


Q ss_pred             hCCCceEEEeCCCCHHHHHHHHHhcccCCEEEEEccCCCCc-cccchHhhhc-CcEEEeec----cc-CC----cHHHHH
Q 017868          252 MGTGIDVSFDCAGLNKTMSTALGATCAGGKVCLVGMGHHEM-TVPLTPAAVR-EVDVVGVF----RY-KN----TWPLCL  320 (365)
Q Consensus       252 ~~~~~d~vid~~g~~~~~~~~~~~l~~~G~~~~~g~~~~~~-~~~~~~~~~~-~~~i~~~~----~~-~~----~~~~~~  320 (365)
                       +.++|++||++|. ..+..++++++++|+++.+|...... .++...+..+ .+.+.+..    .. .+    .+++++
T Consensus       207 -~~g~Dvvid~~g~-~~~~~~~~~l~~~G~iv~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  284 (325)
T 3jyn_A          207 -GKKCPVVYDGVGQ-DTWLTSLDSVAPRGLVVSFGNASGPVSGVNLGILAQKDSVYVTRPTLGSYANNAQNLQTMADELF  284 (325)
T ss_dssp             -TCCEEEEEESSCG-GGHHHHHTTEEEEEEEEECCCTTCCCCSCCTHHHHHTTSCEEECCCHHHHSCSTTHHHHHHHHHH
T ss_pred             -CCCceEEEECCCh-HHHHHHHHHhcCCCEEEEEecCCCCCCCCCHHHHhhcCcEEEEeeeeeeecCCHHHHHHHHHHHH
Confidence             6789999999997 48889999999999999998655432 4555556666 56665432    11 23    345899


Q ss_pred             HHHHcCCCCCCCceEEEecCChhhHHHHHHHHhcCCCceEEEEeC
Q 017868          321 ELLRSGKIDVKPLVTHRFGFSQKEVEEAFETSARGGTAIKVMFNL  365 (365)
Q Consensus       321 ~~l~~g~~~~~~~~~~~~~~~~~~~~~a~~~~~~~~~~gk~vi~~  365 (365)
                      +++++|++  ++.++++|++  +++.+|++.+++++..||+||.+
T Consensus       285 ~l~~~g~l--~~~i~~~~~l--~~~~~A~~~~~~~~~~Gkvvl~p  325 (325)
T 3jyn_A          285 DMLASGKL--KVDGIEQYAL--KDAAKAQIELSARRTTGSTILIP  325 (325)
T ss_dssp             HHHHTTSS--CCCCCEEEEG--GGHHHHHHHHHTTCCCSCEEEEC
T ss_pred             HHHHCCCe--eCccccEEcH--HHHHHHHHHHHcCCCCceEEEeC
Confidence            99999999  4457899999  99999999999999999999874

>1yb5_A Quinone oxidoreductase; medium-chain dehydrogenase/reductase, quinon reduction, structural genomics, structural genomics consort; HET: NAP; 1.85A {Homo sapiens} SCOP: b.35.1.2 c.2.1.1

Probab=100.00  E-value=6.3e-47  Score=346.44  Aligned_cols=310  Identities=22%  Similarity=0.354  Sum_probs=259.6

Q ss_pred             hhcceeEEEecC---CceEE-EEecCCCCCCCcEEEEEeeeeeCcccHhhhhccccCCccCCCCcccCccceEEEEEeCC
Q 017868           15 EEVNMAAWLLGV---NTLKI-QPFELPSLGPYDVLVRMKAVGICGSDVHYLKTLRCADFVVKEPMVIGHECAGVIEKVGS   90 (365)
Q Consensus        15 ~~~~~~~~~~~~---~~l~~-~~~~~p~~~~~eVlI~v~~~~l~~~D~~~~~g~~~~~~~~~~p~~~G~e~~G~V~~vG~   90 (365)
                      +.+|+++++...   +.+++ .++|.|+|+++||+|||.++++|++|++...|.+..  ...+|.++|||++|+|+++|+
T Consensus        27 ~~~Mka~~~~~~g~~~~l~~~~~~~~P~~~~~eVlVkv~a~gi~~~D~~~~~G~~~~--~~~~P~v~G~E~~G~V~~vG~  104 (351)
T 1yb5_A           27 QKLMRAVRVFEFGGPEVLKLRSDIAVPIPKDHQVLIKVHACGVNPVETYIRSGTYSR--KPLLPYTPGSDVAGVIEAVGD  104 (351)
T ss_dssp             -CEEEEEEESSCSSGGGEEEEEEEECCCCCTTEEEEEEEEEECCHHHHHHHHTCSSC--CCCSSBCCCSCEEEEEEEECT
T ss_pred             cceEEEEEEccCCCcceeEEeeecCCCCCCCCEEEEEEEEEecCHHHHHHhCCCCCC--CCCCCCcCCceeEEEEEEECC
Confidence            346888888753   46898 899999999999999999999999999988874321  235789999999999999999


Q ss_pred             CCCCCCCCCEEEEcCCcCCCCCccccCCCCCCCCCccccccCCCCcceeeEEeecCCceEECCCCCCcchhccch-hhHH
Q 017868           91 EVKTLVPGDRVALEPGISCWRCDHCKGGRYNLCPEMKFFATPPVHGSLANQVVHPADLCFKLPDNVSLEEGAMCE-PLSV  169 (365)
Q Consensus        91 ~v~~~~~Gd~V~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~v~~~~~~~iP~~~~~~~a~~~~-~~~~  169 (365)
                      +|++|++||||++...                           ..|+|+||+++++++++++|+++++++|+.++ ++.|
T Consensus       105 ~v~~~~vGdrV~~~~~---------------------------~~G~~aey~~v~~~~~~~~P~~l~~~~aA~l~~~~~t  157 (351)
T 1yb5_A          105 NASAFKKGDRVFTSST---------------------------ISGGYAEYALAADHTVYKLPEKLDFKQGAAIGIPYFT  157 (351)
T ss_dssp             TCTTCCTTCEEEESCC---------------------------SSCSSBSEEEEEGGGEEECCTTSCHHHHTTTHHHHHH
T ss_pred             CCCCCCCCCEEEEeCC---------------------------CCCcceeEEEECHHHeEECCCCCCHHHHHhhhhHHHH
Confidence            9999999999987521                           35999999999999999999999999998886 8999


Q ss_pred             HHHHHH-hcCCCCCCEEEEEcC-CHHHHHHHHHHHHHCCCCeEEEEeCChhHHHHHHHcCCCEEEeCCCCcccHHHHHHH
Q 017868          170 GLHACR-RANIGPETNVLIMGA-GPIGLVTMLGAPRAFGAPRIVIVDVDDYRLSVAKEIGADNIVKVSTNLQDIAEEVEK  247 (365)
Q Consensus       170 a~~~~~-~~~~~~g~~vlI~G~-g~~G~~ai~~l~~~~g~~~vi~v~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~i~~  247 (365)
                      ||+++. .+++++|++|||+|+ |++|++++| +++..|+ .|+++++++++.++++++|++.++++..  +++.+.+++
T Consensus       158 a~~al~~~~~~~~g~~vlV~GasggiG~~~~~-~a~~~Ga-~Vi~~~~~~~~~~~~~~~ga~~~~d~~~--~~~~~~~~~  233 (351)
T 1yb5_A          158 AYRALIHSACVKAGESVLVHGASGGVGLAACQ-IARAYGL-KILGTAGTEEGQKIVLQNGAHEVFNHRE--VNYIDKIKK  233 (351)
T ss_dssp             HHHHHHTTSCCCTTCEEEEETCSSHHHHHHHH-HHHHTTC-EEEEEESSHHHHHHHHHTTCSEEEETTS--TTHHHHHHH
T ss_pred             HHHHHHHhhCCCCcCEEEEECCCChHHHHHHH-HHHHCCC-EEEEEeCChhHHHHHHHcCCCEEEeCCC--chHHHHHHH
Confidence            999995 689999999999997 999999999 8889999 6888889999999999999998887643  567666666


Q ss_pred             HHHHhCCCceEEEeCCCCHHHHHHHHHhcccCCEEEEEccCCCCccccchHhhhcCcEEEeeccc---CCc----HHHHH
Q 017868          248 IQKAMGTGIDVSFDCAGLNKTMSTALGATCAGGKVCLVGMGHHEMTVPLTPAAVREVDVVGVFRY---KNT----WPLCL  320 (365)
Q Consensus       248 ~~~~~~~~~d~vid~~g~~~~~~~~~~~l~~~G~~~~~g~~~~~~~~~~~~~~~~~~~i~~~~~~---~~~----~~~~~  320 (365)
                      .+.  +.++|++||++|.. .+..++++++++|+++.+|.. ....++...+..+++++.++...   .+.    ++.+.
T Consensus       234 ~~~--~~~~D~vi~~~G~~-~~~~~~~~l~~~G~iv~~g~~-~~~~~~~~~~~~~~~~i~g~~~~~~~~~~~~~~~~~l~  309 (351)
T 1yb5_A          234 YVG--EKGIDIIIEMLANV-NLSKDLSLLSHGGRVIVVGSR-GTIEINPRDTMAKESSIIGVTLFSSTKEEFQQYAAALQ  309 (351)
T ss_dssp             HHC--TTCEEEEEESCHHH-HHHHHHHHEEEEEEEEECCCC-SCEEECTHHHHTTTCEEEECCGGGCCHHHHHHHHHHHH
T ss_pred             HcC--CCCcEEEEECCChH-HHHHHHHhccCCCEEEEEecC-CCCccCHHHHHhCCcEEEEEEeecCCHHHHHHHHHHHH
Confidence            542  56899999999965 788999999999999999854 23345556678899999997432   223    34556


Q ss_pred             HHHHcCCCCCCCceEEEecCChhhHHHHHHH-HhcCCCceEEEEeC
Q 017868          321 ELLRSGKIDVKPLVTHRFGFSQKEVEEAFET-SARGGTAIKVMFNL  365 (365)
Q Consensus       321 ~~l~~g~~~~~~~~~~~~~~~~~~~~~a~~~-~~~~~~~gk~vi~~  365 (365)
                      +++++|.+  .+.++++|++  +++.+|++. ++++...||+|+++
T Consensus       310 ~~~~~g~l--~~~i~~~~~l--~~~~~A~~~~~~~~~~~gKvvi~~  351 (351)
T 1yb5_A          310 AGMEIGWL--KPVIGSQYPL--EKVAEAHENIIHGSGATGKMILLL  351 (351)
T ss_dssp             HHHHHTCC--CCCEEEEEEG--GGHHHHHHHHHHSSCCSSEEEEEC
T ss_pred             HHHHCCCc--cCccceEEcH--HHHHHHHHHHHHhCCCCeEEEEeC
Confidence            67888887  6788899999  999999998 66667889999974

>1zsy_A Mitochondrial 2-enoyl thioester reductase; medium-chain dehydrogenase/reductase, oxidoreductase, 2-ENOY thioester reductase; 1.75A {Homo sapiens} PDB: 2vcy_A

Probab=100.00  E-value=7e-48  Score=354.03  Aligned_cols=313  Identities=18%  Similarity=0.240  Sum_probs=254.3

Q ss_pred             cchhcceeEEEecCCc----eEEEEecCCCCCCCcEEEEEeeeeeCcccHhhhhccccCCccCCCCcccCccceEEEEEe
Q 017868           13 DGEEVNMAAWLLGVNT----LKIQPFELPSLGPYDVLVRMKAVGICGSDVHYLKTLRCADFVVKEPMVIGHECAGVIEKV   88 (365)
Q Consensus        13 ~~~~~~~~~~~~~~~~----l~~~~~~~p~~~~~eVlI~v~~~~l~~~D~~~~~g~~~~~~~~~~p~~~G~e~~G~V~~v   88 (365)
                      .|+.+||++++.+++.    +++.++|.|+|+++||+|||.++++|++|++.+.|.+..  ...+|.++|||++|+|+++
T Consensus        22 ~m~~~mka~~~~~~g~~~~~l~~~~~~~P~~~~~eVlVkv~a~gi~~~D~~~~~G~~~~--~~~~P~v~G~E~~G~V~~v   99 (357)
T 1zsy_A           22 SMPARVRALVYGHHGDPAKVVELKNLELAAVRGSDVRVKMLAAPINPSDINMIQGNYGL--LPELPAVGGNEGVAQVVAV   99 (357)
T ss_dssp             CCCCCEEEEEESSSSCHHHHEEEEEECCCCCCTTEEEEEEEEEECCHHHHHHHHTCSSC--CCCSSEECCSCCEEEEEEE
T ss_pred             hCchhhEEEEEecCCCccceEEEeeccCCCCCCCEEEEEEEECCCCHHHhhHhcCCCCC--CCCCCccccceEEEEEEEe
Confidence            3556799999987765    899999999999999999999999999999999875321  1246899999999999999


Q ss_pred             CCCCCCCCCCCEEEEcCCcCCCCCccccCCCCCCCCCccccccCCCCcceeeEEeecCCceEECCCCCCcchhccch-hh
Q 017868           89 GSEVKTLVPGDRVALEPGISCWRCDHCKGGRYNLCPEMKFFATPPVHGSLANQVVHPADLCFKLPDNVSLEEGAMCE-PL  167 (365)
Q Consensus        89 G~~v~~~~~Gd~V~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~v~~~~~~~iP~~~~~~~a~~~~-~~  167 (365)
                      |++|++|++||||++.+.                           ..|+|+||+++++++++++|+++++++|+.++ ..
T Consensus       100 G~~v~~~~vGdrV~~~~~---------------------------~~G~~aey~~v~~~~~~~iP~~l~~~~Aa~l~~~~  152 (357)
T 1zsy_A          100 GSNVTGLKPGDWVIPANA---------------------------GLGTWRTEAVFSEEALIQVPSDIPLQSAATLGVNP  152 (357)
T ss_dssp             CTTCCSCCTTCEEEESSS---------------------------CSCCSBSEEEEEGGGEEEECSSSCHHHHHHTTSHH
T ss_pred             CCCCCCCCCCCEEEEcCC---------------------------CCccceeEEecCHHHcEECCCCCCHHHHhhhcccH
Confidence            999999999999987531                           35999999999999999999999999999887 67


Q ss_pred             HHHHHHHH-hcCCCCCCEEEEEcC-CHHHHHHHHHHHHHCCCCeEEEEeCCh---hHHHHHHHcCCCEEEeCCCCcccHH
Q 017868          168 SVGLHACR-RANIGPETNVLIMGA-GPIGLVTMLGAPRAFGAPRIVIVDVDD---YRLSVAKEIGADNIVKVSTNLQDIA  242 (365)
Q Consensus       168 ~~a~~~~~-~~~~~~g~~vlI~G~-g~~G~~ai~~l~~~~g~~~vi~v~~~~---~~~~~~~~~g~~~~~~~~~~~~~~~  242 (365)
                      .|||+++. .+++++|++|||+|+ |++|++++| +|+.+|+++++++++++   ++.++++++|++.++++.+   ...
T Consensus       153 ~ta~~~l~~~~~~~~g~~VlV~Ga~G~vG~~aiq-lak~~Ga~vi~~~~~~~~~~~~~~~~~~lGa~~vi~~~~---~~~  228 (357)
T 1zsy_A          153 CTAYRMLMDFEQLQPGDSVIQNASNSGVGQAVIQ-IAAALGLRTINVVRDRPDIQKLSDRLKSLGAEHVITEEE---LRR  228 (357)
T ss_dssp             HHHHHHHHHSSCCCTTCEEEESSTTSHHHHHHHH-HHHHHTCEEEEEECCCSCHHHHHHHHHHTTCSEEEEHHH---HHS
T ss_pred             HHHHHHHHHHhccCCCCEEEEeCCcCHHHHHHHH-HHHHcCCEEEEEecCccchHHHHHHHHhcCCcEEEecCc---chH
Confidence            89999985 579999999999997 999999999 99999996655655443   3678899999999887431   011


Q ss_pred             HHHHHHHHHhC-CCceEEEeCCCCHHHHHHHHHhcccCCEEEEEccCC-CCccccchHhhhcCcEEEeeccc--------
Q 017868          243 EEVEKIQKAMG-TGIDVSFDCAGLNKTMSTALGATCAGGKVCLVGMGH-HEMTVPLTPAAVREVDVVGVFRY--------  312 (365)
Q Consensus       243 ~~i~~~~~~~~-~~~d~vid~~g~~~~~~~~~~~l~~~G~~~~~g~~~-~~~~~~~~~~~~~~~~i~~~~~~--------  312 (365)
                      +.+++.+.  + .++|+||||+|.+ ....++++++++|+++.+|... ....++...+..+++++.+++..        
T Consensus       229 ~~~~~~~~--~~~~~Dvvid~~g~~-~~~~~~~~l~~~G~iv~~G~~~~~~~~~~~~~~~~~~~~i~g~~~~~~~~~~~~  305 (357)
T 1zsy_A          229 PEMKNFFK--DMPQPRLALNCVGGK-SSTELLRQLARGGTMVTYGGMAKQPVVASVSLLIFKDLKLRGFWLSQWKKDHSP  305 (357)
T ss_dssp             GGGGGTTS--SSCCCSEEEESSCHH-HHHHHHTTSCTTCEEEECCCCTTCCBCCCHHHHHHSCCEEEECCHHHHHHHSCH
T ss_pred             HHHHHHHh--CCCCceEEEECCCcH-HHHHHHHhhCCCCEEEEEecCCCCCCCCCHHHHHhcCceEEEEEcchhcccCCH
Confidence            12222211  2 2699999999976 4467899999999999997432 23345555677899999997542        


Q ss_pred             ---CCcHHHHHHHHHcCCCCCCCceEEEecCChhhHHHHHHHHhcCCCceEEEEeC
Q 017868          313 ---KNTWPLCLELLRSGKIDVKPLVTHRFGFSQKEVEEAFETSARGGTAIKVMFNL  365 (365)
Q Consensus       313 ---~~~~~~~~~~l~~g~~~~~~~~~~~~~~~~~~~~~a~~~~~~~~~~gk~vi~~  365 (365)
                         .+.++++++++++|++  ++.+.++|+|  +++.+|++.+.++...||+|+++
T Consensus       306 ~~~~~~~~~~~~l~~~g~l--~~~~~~~~~l--~~~~~A~~~~~~~~~~gKvvl~~  357 (357)
T 1zsy_A          306 DQFKELILTLCDLIRRGQL--TAPACSQVPL--QDYQSALEASMKPFISSKQILTM  357 (357)
T ss_dssp             HHHHHHHHHHHHHHHTTSS--CCCCEEEEEG--GGHHHHHHHHTSSSCSSEEEEEC
T ss_pred             HHHHHHHHHHHHHHHcCCC--cCccceEEcH--HHHHHHHHHHHhCCCCCcEEEeC
Confidence               2357889999999999  4556688999  99999999999888889999975

>1gu7_A Enoyl-[acyl-carrier-protein] reductase [NADPH, B-specific] 1,mitochondrial; oxidoreductase, thioester reduction, fatty acids; 1.70A {Candida tropicalis} SCOP: b.35.1.2 c.2.1.1 PDB: 1guf_A* 1n9g_B* 1n9g_A* 1gyr_A 1h0k_A

Probab=100.00  E-value=1.7e-47  Score=352.73  Aligned_cols=317  Identities=17%  Similarity=0.209  Sum_probs=257.7

Q ss_pred             hhcceeEEEecCCc----eEEEEecCCCCC--CCcEEEEEeeeeeCcccHhhhhccccCCccCCCC---------cccCc
Q 017868           15 EEVNMAAWLLGVNT----LKIQPFELPSLG--PYDVLVRMKAVGICGSDVHYLKTLRCADFVVKEP---------MVIGH   79 (365)
Q Consensus        15 ~~~~~~~~~~~~~~----l~~~~~~~p~~~--~~eVlI~v~~~~l~~~D~~~~~g~~~~~~~~~~p---------~~~G~   79 (365)
                      |++||++++.+++.    ++++++|.|+|.  ++||+|||.++++|++|++.+.|.+..  ...+|         .++||
T Consensus         1 ~~~mka~~~~~~g~~~~~l~~~~~~~P~p~~~~~eVlVkv~a~gi~~~D~~~~~g~~~~--~~~~P~~~~~~~p~~i~G~   78 (364)
T 1gu7_A            1 MITAQAVLYTQHGEPKDVLFTQSFEIDDDNLAPNEVIVKTLGSPVNPSDINQIQGVYPS--KPAKTTGFGTTEPAAPCGN   78 (364)
T ss_dssp             CEEEEEEEESSCSCHHHHCEEEEEEECTTSCCTTEEEEEEEEEEECHHHHHHHHTCSSC--CCCCBSTTCCSSCBEECCS
T ss_pred             CceEEEEEeccCCCchheeEEeeccCCCCCCCCCeEEEEEEeccCCHHHHHHhcCCCCC--CCCCCccccccCcccccCc
Confidence            45689999987764    899999998877  999999999999999999999875421  12345         89999


Q ss_pred             cceEEEEEeCCCCCCCCCCCEEEEcCCcCCCCCccccCCCCCCCCCccccccCCCCcceeeEEeecCCceEECCC-----
Q 017868           80 ECAGVIEKVGSEVKTLVPGDRVALEPGISCWRCDHCKGGRYNLCPEMKFFATPPVHGSLANQVVHPADLCFKLPD-----  154 (365)
Q Consensus        80 e~~G~V~~vG~~v~~~~~Gd~V~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~v~~~~~~~iP~-----  154 (365)
                      |++|+|+++|++|++|++||||++.+.                           ..|+|+||+++++++++++|+     
T Consensus        79 E~~G~V~~vG~~v~~~~vGdrV~~~~~---------------------------~~G~~aey~~v~~~~~~~~P~~~~~~  131 (364)
T 1gu7_A           79 EGLFEVIKVGSNVSSLEAGDWVIPSHV---------------------------NFGTWRTHALGNDDDFIKLPNPAQSK  131 (364)
T ss_dssp             CCEEEEEEECTTCCSCCTTCEEEESSS---------------------------CCCCSBSEEEEEGGGEEEECCHHHHH
T ss_pred             eeEEEEEEeCCCCCcCCCCCEEEecCC---------------------------CCCcchheEecCHHHeEEcCCccccc
Confidence            999999999999999999999987521                           359999999999999999998     


Q ss_pred             ------CCCcchhccch-hhHHHHHHHHh-cCCCCC-CEEEEEcC-CHHHHHHHHHHHHHCCCCeEEEEeCChh----HH
Q 017868          155 ------NVSLEEGAMCE-PLSVGLHACRR-ANIGPE-TNVLIMGA-GPIGLVTMLGAPRAFGAPRIVIVDVDDY----RL  220 (365)
Q Consensus       155 ------~~~~~~a~~~~-~~~~a~~~~~~-~~~~~g-~~vlI~G~-g~~G~~ai~~l~~~~g~~~vi~v~~~~~----~~  220 (365)
                            ++++++|+.++ ++.|||++++. +++++| ++|||+|+ |++|++++| +|+.+|++ ++++.++++    +.
T Consensus       132 ~~~~~~~~~~~~aa~l~~~~~ta~~~l~~~~~~~~g~~~VlV~Ga~G~vG~~aiq-lak~~Ga~-vi~~~~~~~~~~~~~  209 (364)
T 1gu7_A          132 ANGKPNGLTINQGATISVNPLTAYLMLTHYVKLTPGKDWFIQNGGTSAVGKYASQ-IGKLLNFN-SISVIRDRPNLDEVV  209 (364)
T ss_dssp             HTTCSCCCCHHHHHTCTTHHHHHHHHHHSSSCCCTTTCEEEESCTTSHHHHHHHH-HHHHHTCE-EEEEECCCTTHHHHH
T ss_pred             cccccCCCCHHHHhhccccHHHHHHHHHHhhccCCCCcEEEECCCCcHHHHHHHH-HHHHCCCE-EEEEecCccccHHHH
Confidence                  89999999987 78899999976 689999 99999997 999999999 99999995 555544443    36


Q ss_pred             HHHHHcCCCEEEeCCCC-cccHHHHHHHHHHHhCCCceEEEeCCCCHHHHHHHHHhcccCCEEEEEccCCC-CccccchH
Q 017868          221 SVAKEIGADNIVKVSTN-LQDIAEEVEKIQKAMGTGIDVSFDCAGLNKTMSTALGATCAGGKVCLVGMGHH-EMTVPLTP  298 (365)
Q Consensus       221 ~~~~~~g~~~~~~~~~~-~~~~~~~i~~~~~~~~~~~d~vid~~g~~~~~~~~~~~l~~~G~~~~~g~~~~-~~~~~~~~  298 (365)
                      ++++++|++.++++.+. ..++.+.+++++...+.++|+||||+|.... ..++++++++|+++.+|.... ...++...
T Consensus       210 ~~~~~lGa~~vi~~~~~~~~~~~~~i~~~t~~~~~g~Dvvid~~G~~~~-~~~~~~l~~~G~~v~~g~~~~~~~~~~~~~  288 (364)
T 1gu7_A          210 ASLKELGATQVITEDQNNSREFGPTIKEWIKQSGGEAKLALNCVGGKSS-TGIARKLNNNGLMLTYGGMSFQPVTIPTSL  288 (364)
T ss_dssp             HHHHHHTCSEEEEHHHHHCGGGHHHHHHHHHHHTCCEEEEEESSCHHHH-HHHHHTSCTTCEEEECCCCSSCCEEECHHH
T ss_pred             HHHHhcCCeEEEecCccchHHHHHHHHHHhhccCCCceEEEECCCchhH-HHHHHHhccCCEEEEecCCCCCCcccCHHH
Confidence            77899999998886421 1467777777651126799999999997644 488999999999999986432 33455556


Q ss_pred             hhhcCcEEEeeccc----------CCcHHHHHHHHHcCCCCCCCceEEEecC-ChhhHHHHHHHHhcCCCceEEEEeC
Q 017868          299 AAVREVDVVGVFRY----------KNTWPLCLELLRSGKIDVKPLVTHRFGF-SQKEVEEAFETSARGGTAIKVMFNL  365 (365)
Q Consensus       299 ~~~~~~~i~~~~~~----------~~~~~~~~~~l~~g~~~~~~~~~~~~~~-~~~~~~~a~~~~~~~~~~gk~vi~~  365 (365)
                      +..+++++.+++..          .+.++++++++++|.+.+.+.  .++++ +++++.+|++.+.++...||+||++
T Consensus       289 ~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~l~~~g~l~~~~~--~~~~~~~l~~~~~A~~~~~~~~~~gKvvv~~  364 (364)
T 1gu7_A          289 YIFKNFTSAGFWVTELLKNNKELKTSTLNQIIAWYEEGKLTDAKS--IETLYDGTKPLHELYQDGVANSKDGKQLITY  364 (364)
T ss_dssp             HHHSCCEEEECCHHHHHTTCHHHHHHHHHHHHHHHHHTCCCCCCC--EEEECCSSSCHHHHHHHHHHTGGGSCEEEEC
T ss_pred             HhhcCcEEEEEchhHhcccCHHHHHHHHHHHHHHHHcCCcccccc--eEEecCchhhHHHHHHHHHhCCCCceEEEeC
Confidence            77899999997643          246889999999999965444  45556 3379999999998888899999975

>1wly_A CAAR, 2-haloacrylate reductase; NADPH-dependent oxidoreductase, oxidoreductase; 1.30A {Burkholderia SP}

Probab=100.00  E-value=7.2e-47  Score=344.27  Aligned_cols=310  Identities=23%  Similarity=0.296  Sum_probs=258.0

Q ss_pred             ceeEEEecC---CceEEEEecCCCCCCCcEEEEEeeeeeCcccHhhhhccccCCccCCCCcccCccceEEEEEeCCCCCC
Q 017868           18 NMAAWLLGV---NTLKIQPFELPSLGPYDVLVRMKAVGICGSDVHYLKTLRCADFVVKEPMVIGHECAGVIEKVGSEVKT   94 (365)
Q Consensus        18 ~~~~~~~~~---~~l~~~~~~~p~~~~~eVlI~v~~~~l~~~D~~~~~g~~~~~~~~~~p~~~G~e~~G~V~~vG~~v~~   94 (365)
                      ||++++.++   +.+++.++|.|+|+++||+|||.++++|++|++.+.|.+.......+|.++|||++|+|+++|++|++
T Consensus         2 Mka~~~~~~g~~~~l~~~~~~~P~~~~~eVlVkv~a~gi~~~D~~~~~G~~~~~~~~~~p~i~G~e~~G~V~~vG~~v~~   81 (333)
T 1wly_A            2 VMAAVIHKKGGPDNFVWEEVKVGSPGPGQVRLRNTAIGVNFLDTYHRAGIPHPLVVGEPPIVVGFEAAAVVEEVGPGVTD   81 (333)
T ss_dssp             CEEEEESSCSSGGGEEEEECCCCCCCTTEEEEEEEEEEECHHHHHHHC----------CCEECCCEEEEEEEEECTTCCS
T ss_pred             cEEEEEcccCCcceeEEEeccCCCCCCCeEEEEEEEEecCHHHHHHhCCCcCCCCCCCCCccccceeEEEEEEECCCCCC
Confidence            788888854   46999999999999999999999999999999988874311100356899999999999999999999


Q ss_pred             CCCCCEEEEcCCcCCCCCccccCCCCCCCCCccccccCCCCcceeeEEeecCCceEECCCCCCcch--hccch-hhHHHH
Q 017868           95 LVPGDRVALEPGISCWRCDHCKGGRYNLCPEMKFFATPPVHGSLANQVVHPADLCFKLPDNVSLEE--GAMCE-PLSVGL  171 (365)
Q Consensus        95 ~~~Gd~V~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~v~~~~~~~iP~~~~~~~--a~~~~-~~~~a~  171 (365)
                      |++||||+..+.                           ..|+|+||+++++++++++|+++++++  |+.++ ++.|||
T Consensus        82 ~~~GdrV~~~~~---------------------------~~G~~aey~~v~~~~~~~iP~~~~~~~~~aa~l~~~~~ta~  134 (333)
T 1wly_A           82 FTVGERVCTCLP---------------------------PLGAYSQERLYPAEKLIKVPKDLDLDDVHLAGLMLKGMTAQ  134 (333)
T ss_dssp             CCTTCEEEECSS---------------------------SCCCSBSEEEEEGGGCEECCTTCCCCHHHHHHHHHHHHHHH
T ss_pred             CCCCCEEEEecC---------------------------CCCcceeEEEecHHHcEeCCCCCChHHhCccchhhhHHHHH
Confidence            999999976421                           259999999999999999999999999  77665 899999


Q ss_pred             HHHH-hcCCCCCCEEEEEcC-CHHHHHHHHHHHHHCCCCeEEEEeCChhHHHHHHHcCCCEEEeCCCCcccHHHHHHHHH
Q 017868          172 HACR-RANIGPETNVLIMGA-GPIGLVTMLGAPRAFGAPRIVIVDVDDYRLSVAKEIGADNIVKVSTNLQDIAEEVEKIQ  249 (365)
Q Consensus       172 ~~~~-~~~~~~g~~vlI~G~-g~~G~~ai~~l~~~~g~~~vi~v~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~i~~~~  249 (365)
                      +++. .+++++|++|||+|+ |++|++++| +++..|+ +|+++++++++.+.++++|++.++++..  .++.+.+.+..
T Consensus       135 ~~l~~~~~~~~g~~vlV~Ga~ggiG~~~~~-~a~~~G~-~Vi~~~~~~~~~~~~~~~g~~~~~d~~~--~~~~~~i~~~~  210 (333)
T 1wly_A          135 YLLHQTHKVKPGDYVLIHAAAGGMGHIMVP-WARHLGA-TVIGTVSTEEKAETARKLGCHHTINYST--QDFAEVVREIT  210 (333)
T ss_dssp             HHHHTTSCCCTTCEEEETTTTSTTHHHHHH-HHHHTTC-EEEEEESSHHHHHHHHHHTCSEEEETTT--SCHHHHHHHHH
T ss_pred             HHHHHhhCCCCCCEEEEECCccHHHHHHHH-HHHHCCC-EEEEEeCCHHHHHHHHHcCCCEEEECCC--HHHHHHHHHHh
Confidence            9996 689999999999996 999999999 8889999 7888999999999999999998887643  56767776654


Q ss_pred             HHhCCCceEEEeCCCCHHHHHHHHHhcccCCEEEEEccCCC-Cccccch-HhhhcC--cEEEeeccc--------CCcHH
Q 017868          250 KAMGTGIDVSFDCAGLNKTMSTALGATCAGGKVCLVGMGHH-EMTVPLT-PAAVRE--VDVVGVFRY--------KNTWP  317 (365)
Q Consensus       250 ~~~~~~~d~vid~~g~~~~~~~~~~~l~~~G~~~~~g~~~~-~~~~~~~-~~~~~~--~~i~~~~~~--------~~~~~  317 (365)
                      .  +.++|++||++|. ..+..++++++++|+++.+|.... ...++.. .+..++  +++.+++..        .+.++
T Consensus       211 ~--~~~~d~vi~~~g~-~~~~~~~~~l~~~G~iv~~g~~~~~~~~~~~~~~~~~~~~~~~i~g~~~~~~~~~~~~~~~~~  287 (333)
T 1wly_A          211 G--GKGVDVVYDSIGK-DTLQKSLDCLRPRGMCAAYGHASGVADPIRVVEDLGVRGSLFITRPALWHYMSNRSEIDEGSK  287 (333)
T ss_dssp             T--TCCEEEEEECSCT-TTHHHHHHTEEEEEEEEECCCTTCCCCCCCHHHHTTTTTSCEEECCCGGGGSCSHHHHHHHHH
T ss_pred             C--CCCCeEEEECCcH-HHHHHHHHhhccCCEEEEEecCCCCcCCCChhHhhhhcCCcEEEEEeehhhccCHHHHHHHHH
Confidence            3  5689999999998 588899999999999999986543 2344444 566788  888886431        13578


Q ss_pred             HHHHHHHcCCCCCCCceEEEecCChhhHHHHHHHHhcCCCceEEEEeC
Q 017868          318 LCLELLRSGKIDVKPLVTHRFGFSQKEVEEAFETSARGGTAIKVMFNL  365 (365)
Q Consensus       318 ~~~~~l~~g~~~~~~~~~~~~~~~~~~~~~a~~~~~~~~~~gk~vi~~  365 (365)
                      ++++++++|.+  ++.++++|+|  +++.+|++.+++++..||+|+++
T Consensus       288 ~~~~l~~~g~l--~~~i~~~~~l--~~~~~A~~~~~~~~~~gKvvi~~  331 (333)
T 1wly_A          288 CLFDAVKAGVL--HSSVAKTFPL--REAAAAHKYMGGRQTIGSIVLLP  331 (333)
T ss_dssp             HHHHHHHTTSC--CCCEEEEEEG--GGHHHHHHHHHHCSCCSEEEEET
T ss_pred             HHHHHHHCCCc--CCCcceEEeH--HHHHHHHHHHHcCCCceEEEEEe
Confidence            99999999998  6778999999  99999999999888899999874

>1qor_A Quinone oxidoreductase; HET: NAP; 2.20A {Escherichia coli} SCOP: b.35.1.2 c.2.1.1

Probab=100.00  E-value=1.2e-46  Score=342.11  Aligned_cols=307  Identities=23%  Similarity=0.250  Sum_probs=257.8

Q ss_pred             ceeEEEecC---CceEEEEecCCCCCCCcEEEEEeeeeeCcccHhhhhccccCCccCCCCcccCccceEEEEEeCCCCCC
Q 017868           18 NMAAWLLGV---NTLKIQPFELPSLGPYDVLVRMKAVGICGSDVHYLKTLRCADFVVKEPMVIGHECAGVIEKVGSEVKT   94 (365)
Q Consensus        18 ~~~~~~~~~---~~l~~~~~~~p~~~~~eVlI~v~~~~l~~~D~~~~~g~~~~~~~~~~p~~~G~e~~G~V~~vG~~v~~   94 (365)
                      ||++++..+   +.+++.++|.|+|+++||+|||.++++|++|++...|.+.   ...+|.++|||++|+|+++|++|++
T Consensus         2 Mka~~~~~~g~~~~l~~~~~~~p~~~~~eVlVkv~a~gi~~~D~~~~~g~~~---~~~~p~v~G~E~~G~V~~vG~~v~~   78 (327)
T 1qor_A            2 ATRIEFHKHGGPEVLQAVEFTPADPAENEIQVENKAIGINFIDTYIRSGLYP---PPSLPSGLGTEAAGIVSKVGSGVKH   78 (327)
T ss_dssp             CEEEEBSSCCSGGGCEEEECCCCCCCTTEEEEEEEEEECCHHHHHHHHTSSC---CSSSSBCCCSCEEEEEEEECTTCCS
T ss_pred             cEEEEEcCCCChhheEEeccCCCCCCCCEEEEEEEEEecCHHHHHHhCCCCC---CCCCCCCCCceeEEEEEEECCCCCC
Confidence            788888753   4689999999999999999999999999999999887532   1357899999999999999999999


Q ss_pred             CCCCCEEEEcCCcCCCCCccccCCCCCCCCCccccccCCCCcceeeEEeecCCceEECCCCCCcchhccch-hhHHHHHH
Q 017868           95 LVPGDRVALEPGISCWRCDHCKGGRYNLCPEMKFFATPPVHGSLANQVVHPADLCFKLPDNVSLEEGAMCE-PLSVGLHA  173 (365)
Q Consensus        95 ~~~Gd~V~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~v~~~~~~~iP~~~~~~~a~~~~-~~~~a~~~  173 (365)
                      |++|||| +.+.                          ..+|+|+||++++++.++++|+++++++|+.++ ++.|||++
T Consensus        79 ~~~GdrV-~~~g--------------------------~~~G~~aey~~v~~~~~~~iP~~l~~~~aa~l~~~~~ta~~a  131 (327)
T 1qor_A           79 IKAGDRV-VYAQ--------------------------SALGAYSSVHNIIADKAAILPAAISFEQAAASFLKGLTVYYL  131 (327)
T ss_dssp             CCTTCEE-EESC--------------------------CSSCCSBSEEEEEGGGEEECCTTSCHHHHHHHHHHHHHHHHH
T ss_pred             CCCCCEE-EECC--------------------------CCCceeeeEEEecHHHcEECCCCCCHHHHHHhhhHHHHHHHH
Confidence            9999999 4310                          124999999999999999999999999987765 89999999


Q ss_pred             HH-hcCCCCCCEEEEEcC-CHHHHHHHHHHHHHCCCCeEEEEeCChhHHHHHHHcCCCEEEeCCCCcccHHHHHHHHHHH
Q 017868          174 CR-RANIGPETNVLIMGA-GPIGLVTMLGAPRAFGAPRIVIVDVDDYRLSVAKEIGADNIVKVSTNLQDIAEEVEKIQKA  251 (365)
Q Consensus       174 ~~-~~~~~~g~~vlI~G~-g~~G~~ai~~l~~~~g~~~vi~v~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~i~~~~~~  251 (365)
                      +. .+++++|++|||+|+ |++|++++| +++..|+ +|+++++++++.+.++++|++.++++..  +++.+.+.+.+. 
T Consensus       132 l~~~~~~~~g~~vlV~Ga~ggiG~~~~~-~a~~~G~-~V~~~~~~~~~~~~~~~~g~~~~~~~~~--~~~~~~~~~~~~-  206 (327)
T 1qor_A          132 LRKTYEIKPDEQFLFHAAAGGVGLIACQ-WAKALGA-KLIGTVGTAQKAQSALKAGAWQVINYRE--EDLVERLKEITG-  206 (327)
T ss_dssp             HHTTSCCCTTCEEEESSTTBHHHHHHHH-HHHHHTC-EEEEEESSHHHHHHHHHHTCSEEEETTT--SCHHHHHHHHTT-
T ss_pred             HHHhhCCCCCCEEEEECCCCHHHHHHHH-HHHHcCC-EEEEEeCCHHHHHHHHHcCCCEEEECCC--ccHHHHHHHHhC-
Confidence            96 789999999999985 999999999 8888899 6888889999999999999998887643  566666665532 


Q ss_pred             hCCCceEEEeCCCCHHHHHHHHHhcccCCEEEEEccCCCC-ccccchHhhhc-CcEEEeecc---------cCCcHHHHH
Q 017868          252 MGTGIDVSFDCAGLNKTMSTALGATCAGGKVCLVGMGHHE-MTVPLTPAAVR-EVDVVGVFR---------YKNTWPLCL  320 (365)
Q Consensus       252 ~~~~~d~vid~~g~~~~~~~~~~~l~~~G~~~~~g~~~~~-~~~~~~~~~~~-~~~i~~~~~---------~~~~~~~~~  320 (365)
                       +.++|++||++| ...+..++++++++|+++.+|..... ..++...+..+ .+++.+...         ..+.+++++
T Consensus       207 -~~~~D~vi~~~g-~~~~~~~~~~l~~~G~iv~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  284 (327)
T 1qor_A          207 -GKKVRVVYDSVG-RDTWERSLDCLQRRGLMVSFGNSSGAVTGVNLGILNQKGSLYVTRPSLQGYITTREELTEASNELF  284 (327)
T ss_dssp             -TCCEEEEEECSC-GGGHHHHHHTEEEEEEEEECCCTTCCCCCBCTHHHHHTTSCEEECCCHHHHCCSHHHHHHHHHHHH
T ss_pred             -CCCceEEEECCc-hHHHHHHHHHhcCCCEEEEEecCCCCCCccCHHHHhhccceEEEccchhhhcCCHHHHHHHHHHHH
Confidence             568999999999 55889999999999999999865432 34555566677 777775422         134578999


Q ss_pred             HHHHcCCCCCCCceE--EEecCChhhHHHHHHHHhcCCCceEEEEeC
Q 017868          321 ELLRSGKIDVKPLVT--HRFGFSQKEVEEAFETSARGGTAIKVMFNL  365 (365)
Q Consensus       321 ~~l~~g~~~~~~~~~--~~~~~~~~~~~~a~~~~~~~~~~gk~vi~~  365 (365)
                      +++++|.+  ++.++  ++|+|  +++.+|++.+++++..||+|+++
T Consensus       285 ~l~~~g~l--~~~i~~~~~~~l--~~~~~A~~~~~~~~~~gKvvl~~  327 (327)
T 1qor_A          285 SLIASGVI--KVDVAEQQKYPL--KDAQRAHEILESRATQGSSLLIP  327 (327)
T ss_dssp             HHHHTTSS--CCCCCGGGEEEG--GGHHHHHHHHHTTCCCBCCEEEC
T ss_pred             HHHHCCCc--ccccccCcEEcH--HHHHHHHHHHHhCCCCceEEEeC
Confidence            99999999  56677  89999  99999999999988899999874

>4b7c_A Probable oxidoreductase; NADP cofactor, rossmann fold; HET: MES; 2.10A {Pseudomonas aeruginosa PA01} PDB: 4b7x_A*

Probab=100.00  E-value=6.8e-46  Score=338.36  Aligned_cols=301  Identities=18%  Similarity=0.182  Sum_probs=254.9

Q ss_pred             hcceeEEEe-------cCCceEEEEecCCCCCCCcEEEEEeeeeeCcccHhhhhccccCCccCCCCcccCcc----ceEE
Q 017868           16 EVNMAAWLL-------GVNTLKIQPFELPSLGPYDVLVRMKAVGICGSDVHYLKTLRCADFVVKEPMVIGHE----CAGV   84 (365)
Q Consensus        16 ~~~~~~~~~-------~~~~l~~~~~~~p~~~~~eVlI~v~~~~l~~~D~~~~~g~~~~~~~~~~p~~~G~e----~~G~   84 (365)
                      ++|+++++.       +++.+++.++|.|+|+++||+|||.++++|++|...+.+..    ...+|.++|||    ++|+
T Consensus         6 ~~mka~v~~~~~~g~~~~~~l~~~~~~~P~~~~~eVlVkv~a~gi~~~d~~~~~~~~----~~~~p~~~G~e~g~~~~G~   81 (336)
T 4b7c_A            6 QINRQYQLAQRPSGLPGRDTFSFVETPLGEPAEGQILVKNEYLSLDPAMRGWMNDAR----SYIPPVGIGEVMRALGVGK   81 (336)
T ss_dssp             CEEEEEEECSCCSSSCCTTSEEEEEEECCCCCTTCEEEEEEEEECCTHHHHHHSCSC----CSSCCCCTTSBCCCEEEEE
T ss_pred             ccccEEEEEecCCCCCCCCceEEEeccCCCCCCCEEEEEEEEEEeCHHHHhhhhccc----ccCCCCCCCcccCCceEEE
Confidence            458888887       36799999999999999999999999999999998776531    13457777777    7999


Q ss_pred             EEEeCCCCCCCCCCCEEEEcCCcCCCCCccccCCCCCCCCCccccccCCCCcceeeEEeecCCceEECCCCCCcchh--c
Q 017868           85 IEKVGSEVKTLVPGDRVALEPGISCWRCDHCKGGRYNLCPEMKFFATPPVHGSLANQVVHPADLCFKLPDNVSLEEG--A  162 (365)
Q Consensus        85 V~~vG~~v~~~~~Gd~V~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~v~~~~~~~iP~~~~~~~a--~  162 (365)
                      |++.  ++++|++||||++.                               |+|+||+++++++++++|+++++.++  +
T Consensus        82 V~~~--~v~~~~vGdrV~~~-------------------------------G~~aey~~v~~~~~~~~P~~~~~~~~a~a  128 (336)
T 4b7c_A           82 VLVS--KHPGFQAGDYVNGA-------------------------------LGVQDYFIGEPKGFYKVDPSRAPLPRYLS  128 (336)
T ss_dssp             EEEE--CSTTCCTTCEEEEE-------------------------------CCSBSEEEECCTTCEEECTTTSCGGGGGT
T ss_pred             EEec--CCCCCCCCCEEecc-------------------------------CCceEEEEechHHeEEcCCCCCchHHHhh
Confidence            9994  58899999999874                               89999999999999999999977765  4


Q ss_pred             cc-hhhHHHHHHH-HhcCCCCCCEEEEEcC-CHHHHHHHHHHHHHCCCCeEEEEeCChhHHHHH-HHcCCCEEEeCCCCc
Q 017868          163 MC-EPLSVGLHAC-RRANIGPETNVLIMGA-GPIGLVTMLGAPRAFGAPRIVIVDVDDYRLSVA-KEIGADNIVKVSTNL  238 (365)
Q Consensus       163 ~~-~~~~~a~~~~-~~~~~~~g~~vlI~G~-g~~G~~ai~~l~~~~g~~~vi~v~~~~~~~~~~-~~~g~~~~~~~~~~~  238 (365)
                      .+ .++.|||+++ +.+++++|++|||+|+ |++|++++| +++..|+ +|+++++++++.+.+ +++|++.++++..  
T Consensus       129 ~l~~~~~tA~~al~~~~~~~~g~~vlI~Ga~g~iG~~~~~-~a~~~Ga-~Vi~~~~~~~~~~~~~~~~g~~~~~~~~~--  204 (336)
T 4b7c_A          129 ALGMTGMTAYFALLDVGQPKNGETVVISGAAGAVGSVAGQ-IARLKGC-RVVGIAGGAEKCRFLVEELGFDGAIDYKN--  204 (336)
T ss_dssp             TTSHHHHHHHHHHHHTTCCCTTCEEEESSTTSHHHHHHHH-HHHHTTC-EEEEEESSHHHHHHHHHTTCCSEEEETTT--
T ss_pred             hcccHHHHHHHHHHHhcCCCCCCEEEEECCCCHHHHHHHH-HHHHCCC-EEEEEeCCHHHHHHHHHHcCCCEEEECCC--
Confidence            44 4899999999 7789999999999998 999999999 8899999 788999999999998 8999999888643  


Q ss_pred             ccHHHHHHHHHHHhCCCceEEEeCCCCHHHHHHHHHhcccCCEEEEEccCCC-------CccccchHhhhcCcEEEeecc
Q 017868          239 QDIAEEVEKIQKAMGTGIDVSFDCAGLNKTMSTALGATCAGGKVCLVGMGHH-------EMTVPLTPAAVREVDVVGVFR  311 (365)
Q Consensus       239 ~~~~~~i~~~~~~~~~~~d~vid~~g~~~~~~~~~~~l~~~G~~~~~g~~~~-------~~~~~~~~~~~~~~~i~~~~~  311 (365)
                      +++.+.+++.+   ++++|++||++|. ..+..++++++++|+++.+|....       ...++...+..+++++.++..
T Consensus       205 ~~~~~~~~~~~---~~~~d~vi~~~g~-~~~~~~~~~l~~~G~iv~~G~~~~~~~~~~~~~~~~~~~~~~~~~~i~g~~~  280 (336)
T 4b7c_A          205 EDLAAGLKREC---PKGIDVFFDNVGG-EILDTVLTRIAFKARIVLCGAISQYNNKEAVRGPANYLSLLVNRARMEGMVV  280 (336)
T ss_dssp             SCHHHHHHHHC---TTCEEEEEESSCH-HHHHHHHTTEEEEEEEEECCCGGGGC------CCTTTTHHHHTTCEEEECCG
T ss_pred             HHHHHHHHHhc---CCCceEEEECCCc-chHHHHHHHHhhCCEEEEEeecccccCCcccccchhHHHHHhCCcEEEEEEh
Confidence            67777776653   5689999999996 588999999999999999985431       124455667889999999876


Q ss_pred             cC------CcHHHHHHHHHcCCCCCCCceEEEecCChhhHHHHHHHHhcCCCceEEEEeC
Q 017868          312 YK------NTWPLCLELLRSGKIDVKPLVTHRFGFSQKEVEEAFETSARGGTAIKVMFNL  365 (365)
Q Consensus       312 ~~------~~~~~~~~~l~~g~~~~~~~~~~~~~~~~~~~~~a~~~~~~~~~~gk~vi~~  365 (365)
                      +.      +.++++++++++|.+  ++.+..+|++  +++.+|++.+++++..||+||++
T Consensus       281 ~~~~~~~~~~~~~~~~l~~~g~l--~~~~~~~~~l--~~~~~A~~~~~~~~~~gKvvi~~  336 (336)
T 4b7c_A          281 MDYAQRFPEGLKEMATWLAEGKL--QSREDIVEGL--ETFPETLLKLFSGENFGKLVLKV  336 (336)
T ss_dssp             GGGGGGHHHHHHHHHHHHHTTSS--CCCEEEEECG--GGHHHHHHHHHTTCCCSEEEEEC
T ss_pred             hhhhhhhHHHHHHHHHHHHCCCc--ccceeeecCH--HHHHHHHHHHHcCCCCceEEEeC
Confidence            42      568899999999999  5555566788  99999999999999999999985

>2c0c_A Zinc binding alcohol dehydrogenase, domain containing 2; oxidoreductase, quinone oxidoreductase, medium-chain dehydrogenase/reductase; HET: NAP; 1.45A {Homo sapiens} PDB: 2x1h_A* 2x7h_A* 2wek_A*

Probab=100.00  E-value=5.1e-46  Score=341.99  Aligned_cols=310  Identities=20%  Similarity=0.255  Sum_probs=256.3

Q ss_pred             cchhcceeEEEecCC-----ceEE-EEecCCCCCCCcEEEEEeeeeeCcccHhhhhccccCCccCCCCcccCccceEEEE
Q 017868           13 DGEEVNMAAWLLGVN-----TLKI-QPFELPSLGPYDVLVRMKAVGICGSDVHYLKTLRCADFVVKEPMVIGHECAGVIE   86 (365)
Q Consensus        13 ~~~~~~~~~~~~~~~-----~l~~-~~~~~p~~~~~eVlI~v~~~~l~~~D~~~~~g~~~~~~~~~~p~~~G~e~~G~V~   86 (365)
                      .++.+||++++.+++     .+++ +++|.|+|+++||+|||.++++|++|++.+.|.+..  ...+|.++|||++|+|+
T Consensus        19 ~~~~~MkA~~~~~~g~~~~~~l~~~~~~p~P~~~~~eVlVkv~a~gi~~~D~~~~~G~~~~--~~~~P~i~G~E~~G~V~   96 (362)
T 2c0c_A           19 YFQSMMQKLVVTRLSPNFREAVTLSRDCPVPLPGDGDLLVRNRFVGVNASDINYSAGRYDP--SVKPPFDIGFEGIGEVV   96 (362)
T ss_dssp             HHCCEEEEEEECSCCSSHHHHEEEEEEEECCCCCTTEEEEEEEEEECCTTHHHHHTTTTCT--TCCSCEECCSEEEEEEE
T ss_pred             cchhhceEEEEeecCCCccceeEEEeecCCCCCCCCeEEEEEEEeccCHHHHHHhcCCCCC--CCCCCCCCCceeEEEEE
Confidence            355679999998763     5889 999999999999999999999999999998875422  24679999999999999


Q ss_pred             EeCCCCC-CCCCCCEEEEcCCcCCCCCccccCCCCCCCCCccccccCCCCcceeeEEeecCCceEECCCCCCcchhccch
Q 017868           87 KVGSEVK-TLVPGDRVALEPGISCWRCDHCKGGRYNLCPEMKFFATPPVHGSLANQVVHPADLCFKLPDNVSLEEGAMCE  165 (365)
Q Consensus        87 ~vG~~v~-~~~~Gd~V~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~v~~~~~~~iP~~~~~~~a~~~~  165 (365)
                      ++|++|+ +|++||||++.                             ..|+|+||++++++.++++|+. +++.|++..
T Consensus        97 ~vG~~V~~~~~vGdrV~~~-----------------------------~~G~~aey~~v~~~~~~~~P~~-~~~aaal~~  146 (362)
T 2c0c_A           97 ALGLSASARYTVGQAVAYM-----------------------------APGSFAEYTVVPASIATPVPSV-KPEYLTLLV  146 (362)
T ss_dssp             EECTTGGGTCCTTCEEEEE-----------------------------CSCCSBSEEEEEGGGCEECSSS-CHHHHTTTT
T ss_pred             EECCCccCCCCCCCEEEEc-----------------------------cCCcceeEEEEcHHHeEECCCC-chHhhcccc
Confidence            9999999 99999999875                             2499999999999999999996 455454445


Q ss_pred             hhHHHHHHH-HhcCCCCCCEEEEEcC-CHHHHHHHHHHHHHCCCCeEEEEeCChhHHHHHHHcCCCEEEeCCCCcccHHH
Q 017868          166 PLSVGLHAC-RRANIGPETNVLIMGA-GPIGLVTMLGAPRAFGAPRIVIVDVDDYRLSVAKEIGADNIVKVSTNLQDIAE  243 (365)
Q Consensus       166 ~~~~a~~~~-~~~~~~~g~~vlI~G~-g~~G~~ai~~l~~~~g~~~vi~v~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~  243 (365)
                      ++.|||+++ +.+++++|++|||+|+ |++|++++| +++..|+ +|+++++++++.++++++|++.+++++.  +++.+
T Consensus       147 ~~~ta~~al~~~~~~~~g~~VlV~Ga~G~iG~~~~q-~a~~~Ga-~Vi~~~~~~~~~~~~~~~Ga~~~~~~~~--~~~~~  222 (362)
T 2c0c_A          147 SGTTAYISLKELGGLSEGKKVLVTAAAGGTGQFAMQ-LSKKAKC-HVIGTCSSDEKSAFLKSLGCDRPINYKT--EPVGT  222 (362)
T ss_dssp             HHHHHHHHHHHHTCCCTTCEEEETTTTBTTHHHHHH-HHHHTTC-EEEEEESSHHHHHHHHHTTCSEEEETTT--SCHHH
T ss_pred             hHHHHHHHHHHhcCCCCCCEEEEeCCCcHHHHHHHH-HHHhCCC-EEEEEECCHHHHHHHHHcCCcEEEecCC--hhHHH
Confidence            889999998 4688999999999995 999999999 8899999 6889999999999999999999888643  56666


Q ss_pred             HHHHHHHHhCCCceEEEeCCCCHHHHHHHHHhcccCCEEEEEccCCCCc-----------cccchHhhhcCcEEEeeccc
Q 017868          244 EVEKIQKAMGTGIDVSFDCAGLNKTMSTALGATCAGGKVCLVGMGHHEM-----------TVPLTPAAVREVDVVGVFRY  312 (365)
Q Consensus       244 ~i~~~~~~~~~~~d~vid~~g~~~~~~~~~~~l~~~G~~~~~g~~~~~~-----------~~~~~~~~~~~~~i~~~~~~  312 (365)
                      .+++.   .+.++|++|||+|. ..+..++++++++|+++.+|......           .+ ...++.+++++.+++..
T Consensus       223 ~~~~~---~~~g~D~vid~~g~-~~~~~~~~~l~~~G~iv~~g~~~~~~~~~~~~~~~~~~~-~~~~~~~~~~i~g~~~~  297 (362)
T 2c0c_A          223 VLKQE---YPEGVDVVYESVGG-AMFDLAVDALATKGRLIVIGFISGYQTPTGLSPVKAGTL-PAKLLKKSASVQGFFLN  297 (362)
T ss_dssp             HHHHH---CTTCEEEEEECSCT-HHHHHHHHHEEEEEEEEECCCGGGTTSSSCCCCCCCTTH-HHHHHHHTCEEEECCGG
T ss_pred             HHHHh---cCCCCCEEEECCCH-HHHHHHHHHHhcCCEEEEEeCCCCcCccccccccccccc-HHHHHhhcceEEEEEhh
Confidence            66554   25689999999997 48889999999999999998543211           11 24567889999997643


Q ss_pred             ------CCcHHHHHHHHHcCCCCCCCc------eEEEecCChhhHHHHHHHHhcCCCceEEEEeC
Q 017868          313 ------KNTWPLCLELLRSGKIDVKPL------VTHRFGFSQKEVEEAFETSARGGTAIKVMFNL  365 (365)
Q Consensus       313 ------~~~~~~~~~~l~~g~~~~~~~------~~~~~~~~~~~~~~a~~~~~~~~~~gk~vi~~  365 (365)
                            .+.++++++++++|++.+...      +.+.|+|  +++.+|++.+++++..||+|+++
T Consensus       298 ~~~~~~~~~~~~~~~l~~~g~l~~~~~~~~~~~~~~~~~l--~~~~~A~~~~~~~~~~gKvvv~~  360 (362)
T 2c0c_A          298 HYLSKYQAAMSHLLEMCVSGDLVCEVDLGDLSPEGRFTGL--ESIFRAVNYMYMGKNTGKIVVEL  360 (362)
T ss_dssp             GCGGGHHHHHHHHHHHHHTTCSCCCEECSTTSTTCSCBST--THHHHHHHHHHTTCCSBEEEEEC
T ss_pred             hhhhhHHHHHHHHHHHHHCCCeEeeeccccccccccccCH--HHHHHHHHHHHcCCCCceEEEEc
Confidence                  346889999999999953322      2355678  99999999999988899999974

>3nx4_A Putative oxidoreductase; csgid, structural genomics, center for struc genomics of infectious diseases, PSI, protein structure INI; HET: MSE NAP; 1.90A {Salmonella enterica subsp} PDB: 1o89_A 1o8c_A*

Probab=100.00  E-value=4.6e-47  Score=344.45  Aligned_cols=306  Identities=17%  Similarity=0.194  Sum_probs=255.1

Q ss_pred             ceeEEEecCC---ceEEEEecCCCCCCCcEEEEEeeeeeCcccHhhhhccccCCccCCCCcccCccceEEEEEeCCCCCC
Q 017868           18 NMAAWLLGVN---TLKIQPFELPSLGPYDVLVRMKAVGICGSDVHYLKTLRCADFVVKEPMVIGHECAGVIEKVGSEVKT   94 (365)
Q Consensus        18 ~~~~~~~~~~---~l~~~~~~~p~~~~~eVlI~v~~~~l~~~D~~~~~g~~~~~~~~~~p~~~G~e~~G~V~~vG~~v~~   94 (365)
                      ||++++.+++   .++++++|.|+|+++||+|||.++++|++|++.+.|....  ...+|.++|||++|+|+++|  +++
T Consensus         1 MkA~~~~~~g~~~~l~~~~~~~p~~~~~eVlVkv~a~gi~~~D~~~~~g~~~~--~~~~p~v~G~E~~G~V~~~G--v~~   76 (324)
T 3nx4_A            1 MQALILEQQDGKTLASVQHLEESQLPAGDVTVDVHWSSLNYKDALAITGKGKI--IRHFPMIPGIDFAGTVHASE--DPR   76 (324)
T ss_dssp             CEEEEEEESSSSEEEEEEECCGGGSCCCSEEEEEEEEEECHHHHHHHHTCTTC--CCSSSBCCCSEEEEEEEEES--STT
T ss_pred             CceEEEecCCCCceeeEeecCCCCCCCCEEEEEEEEEeCCHHHHhhhcCCCCC--CCCCCccccceeEEEEEEeC--CCC
Confidence            7889998765   4899999999999999999999999999999999875422  24679999999999999998  688


Q ss_pred             CCCCCEEEEcCCcCCCCCccccCCCCCCCCCccccccCCCCcceeeEEeecCCceEECCCCCCcchhccch-hhHHHHHH
Q 017868           95 LVPGDRVALEPGISCWRCDHCKGGRYNLCPEMKFFATPPVHGSLANQVVHPADLCFKLPDNVSLEEGAMCE-PLSVGLHA  173 (365)
Q Consensus        95 ~~~Gd~V~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~v~~~~~~~iP~~~~~~~a~~~~-~~~~a~~~  173 (365)
                      |++||||++.+.         .            .+ ...+|+|+||+.+++++++++|+++++++|+.++ .+.|||++
T Consensus        77 ~~vGdrV~~~~~---------~------------~g-~~~~G~~aey~~v~~~~~~~iP~~~~~~~aa~l~~~~~ta~~a  134 (324)
T 3nx4_A           77 FHAGQEVLLTGW---------G------------VG-ENHWGGLAERARVKGDWLVALPAGLSSRNAMIIGTAGFTAMLC  134 (324)
T ss_dssp             CCTTCEEEEECT---------T------------BT-TTBCCSSBSEEEECGGGCEECCTTCCHHHHHHHHHHHHHHHHH
T ss_pred             CCCCCEEEEccc---------c------------cC-CCCCCceeeEEecCHHHcEECCCCCCHHHHHHhhhHHHHHHHH
Confidence            999999987631         0            01 1246999999999999999999999999999887 67788877


Q ss_pred             H---HhcCCCCCC-EEEEEcC-CHHHHHHHHHHHHHCCCCeEEEEeCChhHHHHHHHcCCCEEEeCCCCcccHHHHHHHH
Q 017868          174 C---RRANIGPET-NVLIMGA-GPIGLVTMLGAPRAFGAPRIVIVDVDDYRLSVAKEIGADNIVKVSTNLQDIAEEVEKI  248 (365)
Q Consensus       174 ~---~~~~~~~g~-~vlI~G~-g~~G~~ai~~l~~~~g~~~vi~v~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~i~~~  248 (365)
                      +   .+.++++++ +|||+|+ |++|++++| +++..|+ +|++++++++|.++++++|++.++++....  .   ++++
T Consensus       135 l~~~~~~~~~~~~g~VlV~Ga~G~vG~~aiq-la~~~Ga-~Vi~~~~~~~~~~~~~~lGa~~vi~~~~~~--~---~~~~  207 (324)
T 3nx4_A          135 VMALEDAGIRPQDGEVVVTGASGGVGSTAVA-LLHKLGY-QVAAVSGRESTHGYLKSLGANRILSRDEFA--E---SRPL  207 (324)
T ss_dssp             HHHHHHTTCCGGGCCEEESSTTSHHHHHHHH-HHHHTTC-CEEEEESCGGGHHHHHHHTCSEEEEGGGSS--C---CCSS
T ss_pred             HHHhhhcccCCCCCeEEEECCCcHHHHHHHH-HHHHcCC-EEEEEeCCHHHHHHHHhcCCCEEEecCCHH--H---HHhh
Confidence            6   456677643 4999997 999999999 9999999 688888999999999999999998864422  1   2222


Q ss_pred             HHHhCCCceEEEeCCCCHHHHHHHHHhcccCCEEEEEccCCCC-ccccchHhhhcCcEEEeeccc-------CCcHHHHH
Q 017868          249 QKAMGTGIDVSFDCAGLNKTMSTALGATCAGGKVCLVGMGHHE-MTVPLTPAAVREVDVVGVFRY-------KNTWPLCL  320 (365)
Q Consensus       249 ~~~~~~~~d~vid~~g~~~~~~~~~~~l~~~G~~~~~g~~~~~-~~~~~~~~~~~~~~i~~~~~~-------~~~~~~~~  320 (365)
                         .+.++|++||++|.+ .+..++++++++|+++.+|..... ..++...+..+++++.+++..       .+.+++++
T Consensus       208 ---~~~~~d~v~d~~g~~-~~~~~~~~l~~~G~iv~~G~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~  283 (324)
T 3nx4_A          208 ---EKQLWAGAIDTVGDK-VLAKVLAQMNYGGCVAACGLAGGFALPTTVMPFILRNVRLQGVDSVMTPPARRAEAWARLV  283 (324)
T ss_dssp             ---CCCCEEEEEESSCHH-HHHHHHHTEEEEEEEEECCCTTCSEEEEESHHHHHHCCEEEECCSTTCCHHHHHHHHHHHH
T ss_pred             ---cCCCccEEEECCCcH-HHHHHHHHHhcCCEEEEEecCCCCCCCCCHHHHhhcCeEEEEEeccccChHHHHHHHHHHH
Confidence               256899999999975 889999999999999999865442 355666788899999997643       24578889


Q ss_pred             HHHHcCCCCCCCceEEEecCChhhHHHHHHHHhcCCCceEEEEeC
Q 017868          321 ELLRSGKIDVKPLVTHRFGFSQKEVEEAFETSARGGTAIKVMFNL  365 (365)
Q Consensus       321 ~~l~~g~~~~~~~~~~~~~~~~~~~~~a~~~~~~~~~~gk~vi~~  365 (365)
                      +++++|.+  ++. +++|++  +++.+|++.+++++..||+|+++
T Consensus       284 ~l~~~g~l--~~~-~~~~~l--~~~~~A~~~~~~~~~~gkvvv~~  323 (324)
T 3nx4_A          284 KDLPESFY--AQA-ATEITL--ADAPKFADAIINNQVQGRTLVKI  323 (324)
T ss_dssp             HHSCHHHH--HHH-EEEEEG--GGHHHHHHHHHTTCCCSEEEEEC
T ss_pred             HHHHcCCC--CCC-ceeEeH--HHHHHHHHHHHhCCCCceEEEec
Confidence            99999988  455 899999  99999999999999999999975

>2vn8_A Reticulon-4-interacting protein 1; mitochondrion, transit peptide, receptor inhibitor; HET: NDP CIT; 2.1A {Homo sapiens}

Probab=100.00  E-value=2.2e-45  Score=339.64  Aligned_cols=312  Identities=21%  Similarity=0.282  Sum_probs=250.9

Q ss_pred             hhcceeEEEecC---CceEE-EEecCCCC-CCCcEEEEEeeeeeCcccHhhhhccccC------------CccCCCCccc
Q 017868           15 EEVNMAAWLLGV---NTLKI-QPFELPSL-GPYDVLVRMKAVGICGSDVHYLKTLRCA------------DFVVKEPMVI   77 (365)
Q Consensus        15 ~~~~~~~~~~~~---~~l~~-~~~~~p~~-~~~eVlI~v~~~~l~~~D~~~~~g~~~~------------~~~~~~p~~~   77 (365)
                      ..+|+++++.++   ..+++ .++|.|++ +++||+|||.++++|++|++.+.|....            .....+|.++
T Consensus        19 ~~~mka~~~~~~g~~~~l~~~~~~p~P~~~~~~eVlVkv~a~gi~~~D~~~~~G~~~~~~~~~~~~~~~~~~~~~~P~v~   98 (375)
T 2vn8_A           19 YFQSMAWVIDKYGKNEVLRFTQNMMMPIIHYPNEVIVKVHAASVNPIDVNMRSGYGATALNMKRDPLHVKIKGEEFPLTL   98 (375)
T ss_dssp             CCCEEEEEBSSCCSGGGCEEEEEECCCCCCSTTEEEEEEEEEEECHHHHHHHTTTTHHHHHHHHCTTCCSCTTTTCSBCC
T ss_pred             CccceeEEeccCCCccceEEeccccCCCCCCCCEEEEEEEEEEcCHHHHHHhccCccccccccccccccccccccCCccc
Confidence            345888888765   36889 99999985 9999999999999999999998874211            1112378999


Q ss_pred             CccceEEEEEeCCCCCCCCCCCEEEEcCCcCCCCCccccCCCCCCCCCccccccCCCCcceeeEEeecCCceEECCCCCC
Q 017868           78 GHECAGVIEKVGSEVKTLVPGDRVALEPGISCWRCDHCKGGRYNLCPEMKFFATPPVHGSLANQVVHPADLCFKLPDNVS  157 (365)
Q Consensus        78 G~e~~G~V~~vG~~v~~~~~Gd~V~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~v~~~~~~~iP~~~~  157 (365)
                      |||++|+|+++|++|++|++||||++.+..                         ...|+|+||+++++++++++|++++
T Consensus        99 G~E~~G~V~~vG~~V~~~~vGDrV~~~~~~-------------------------~~~G~~aey~~v~~~~~~~iP~~ls  153 (375)
T 2vn8_A           99 GRDVSGVVMECGLDVKYFKPGDEVWAAVPP-------------------------WKQGTLSEFVVVSGNEVSHKPKSLT  153 (375)
T ss_dssp             CCEEEEEEEEECTTCCSCCTTCEEEEECCT-------------------------TSCCSSBSEEEEEGGGEEECCTTSC
T ss_pred             ceeeeEEEEEeCCCCCCCCCCCEEEEecCC-------------------------CCCccceeEEEEcHHHeeeCCCCCC
Confidence            999999999999999999999999886321                         1359999999999999999999999


Q ss_pred             cchhccch-hhHHHHHHHH-hcC----CCCCCEEEEEcC-CHHHHHHHHHHHHHCCCCeEEEEeCChhHHHHHHHcCCCE
Q 017868          158 LEEGAMCE-PLSVGLHACR-RAN----IGPETNVLIMGA-GPIGLVTMLGAPRAFGAPRIVIVDVDDYRLSVAKEIGADN  230 (365)
Q Consensus       158 ~~~a~~~~-~~~~a~~~~~-~~~----~~~g~~vlI~G~-g~~G~~ai~~l~~~~g~~~vi~v~~~~~~~~~~~~~g~~~  230 (365)
                      +++|+.++ .+.|||+++. .++    +++|++|||+|+ |++|++++| +++..|+ +|++++ ++++.++++++|++.
T Consensus       154 ~~~Aa~l~~~~~tA~~al~~~~~~~~~~~~g~~VlV~Ga~G~vG~~~~q-la~~~Ga-~Vi~~~-~~~~~~~~~~lGa~~  230 (375)
T 2vn8_A          154 HTQAASLPYVALTAWSAINKVGGLNDKNCTGKRVLILGASGGVGTFAIQ-VMKAWDA-HVTAVC-SQDASELVRKLGADD  230 (375)
T ss_dssp             HHHHTTSHHHHHHHHHHHTTTTCCCTTTCTTCEEEEETTTSHHHHHHHH-HHHHTTC-EEEEEE-CGGGHHHHHHTTCSE
T ss_pred             HHHHhhhHHHHHHHHHHHHHhcccccccCCCCEEEEECCCCHHHHHHHH-HHHhCCC-EEEEEe-ChHHHHHHHHcCCCE
Confidence            99999987 6789999994 678    899999999995 999999999 8899999 577776 678899999999999


Q ss_pred             EEeCCCCcccHHHHHHHHHHHhCCCceEEEeCCCCH-HHHHHHHHhcccCCEEEEEccCCCC-cc---ccc------hHh
Q 017868          231 IVKVSTNLQDIAEEVEKIQKAMGTGIDVSFDCAGLN-KTMSTALGATCAGGKVCLVGMGHHE-MT---VPL------TPA  299 (365)
Q Consensus       231 ~~~~~~~~~~~~~~i~~~~~~~~~~~d~vid~~g~~-~~~~~~~~~l~~~G~~~~~g~~~~~-~~---~~~------~~~  299 (365)
                      ++++..  +++.+.+++     ..++|++||++|.. ..+..++++++++|+++.+|..... ..   +..      ..+
T Consensus       231 v~~~~~--~~~~~~~~~-----~~g~D~vid~~g~~~~~~~~~~~~l~~~G~iv~~g~~~~~~~~~~~~~~~~~~~~~~~  303 (375)
T 2vn8_A          231 VIDYKS--GSVEEQLKS-----LKPFDFILDNVGGSTETWAPDFLKKWSGATYVTLVTPFLLNMDRLGIADGMLQTGVTV  303 (375)
T ss_dssp             EEETTS--SCHHHHHHT-----SCCBSEEEESSCTTHHHHGGGGBCSSSCCEEEESCCSHHHHHHHHCHHHHHHHHHHHH
T ss_pred             EEECCc--hHHHHHHhh-----cCCCCEEEECCCChhhhhHHHHHhhcCCcEEEEeCCCcccccccccccchhheeehhh
Confidence            888653  466555543     36899999999986 4567888999999999999853221 00   000      011


Q ss_pred             hh-------cCcEEEeeccc--CCcHHHHHHHHHcCCCCCCCceEEEecCChhhHHHHHHHHhcCCCceEEEEeC
Q 017868          300 AV-------REVDVVGVFRY--KNTWPLCLELLRSGKIDVKPLVTHRFGFSQKEVEEAFETSARGGTAIKVMFNL  365 (365)
Q Consensus       300 ~~-------~~~~i~~~~~~--~~~~~~~~~~l~~g~~~~~~~~~~~~~~~~~~~~~a~~~~~~~~~~gk~vi~~  365 (365)
                      ..       ++..+.+.+..  .+.++++++++++|++  ++.++++|+|  +++.+|++.+++++..||+|+++
T Consensus       304 ~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~l~~~g~l--~~~i~~~~~l--~~~~~A~~~~~~~~~~gKvvi~~  374 (375)
T 2vn8_A          304 GSKALKHFWKGVHYRWAFFMASGPCLDDIAELVDAGKI--RPVIEQTFPF--SKVPEAFLKVERGHARGKTVINV  374 (375)
T ss_dssp             HHHHHHHHHTTCEEEECCCCCCHHHHHHHHHHHHTTSC--CCCEEEEEEG--GGHHHHHHHHHHCCCSSEEEEEC
T ss_pred             ccccccccccCcceEEEEeCCCHHHHHHHHHHHHCCCc--ccCcCeEECH--HHHHHHHHHHHcCCCCCeEEEEe
Confidence            11       45555544322  3467999999999998  6788899999  99999999999988889999974

>1tt7_A YHFP; alcohol dehydrogenase, Zn-dependent, NAD, structural genomics, protein structure initiative, PSI; 2.70A {Bacillus subtilis} SCOP: b.35.1.2 c.2.1.1 PDB: 1y9e_A*

Probab=100.00  E-value=4.3e-46  Score=338.81  Aligned_cols=313  Identities=19%  Similarity=0.250  Sum_probs=250.8

Q ss_pred             chhcceeEEEecCC---ceEEEEecCCCCCCCcEEEEEeeeeeCcccHhhhhccccCCccCCCCcccCccceEEEEEeCC
Q 017868           14 GEEVNMAAWLLGVN---TLKIQPFELPSLGPYDVLVRMKAVGICGSDVHYLKTLRCADFVVKEPMVIGHECAGVIEKVGS   90 (365)
Q Consensus        14 ~~~~~~~~~~~~~~---~l~~~~~~~p~~~~~eVlI~v~~~~l~~~D~~~~~g~~~~~~~~~~p~~~G~e~~G~V~~vG~   90 (365)
                      ||.+||++++.+++   .++++++|.|+|+++||+|||.++++|++|++...|...  ....+|.++|||++|+|+++  
T Consensus         1 m~~~mka~~~~~~g~~~~l~~~~~~~p~~~~~eVlVkv~a~gi~~~D~~~~~g~~~--~~~~~p~i~G~E~~G~V~~~--   76 (330)
T 1tt7_A            1 MSTLFQALQAEKNADDVSVHVKTISTEDLPKDGVLIKVAYSGINYKDGLAGKAGGN--IVREYPLILGIDAAGTVVSS--   76 (330)
T ss_dssp             -CCEEEEEEECCGGGSCCCEEEEEESSSSCSSSEEEEECCEEECHHHHHHTSTTCT--TCSSCSEECCSEEEEEEEEC--
T ss_pred             CCCcceEEEEecCCCCcceeEeecCCCCCCCCEEEEEEEEEecCHHHHhhhcCCCC--CcCCCCccccceEEEEEEEc--
Confidence            45678999998754   799999999999999999999999999999998887432  12357899999999999996  


Q ss_pred             CCCCCCCCCEEEEcCCcCCCCCccccCCCCCCCCCccccccCCCCcceeeEEeecCCceEECCCCCCcchhccch-hhHH
Q 017868           91 EVKTLVPGDRVALEPGISCWRCDHCKGGRYNLCPEMKFFATPPVHGSLANQVVHPADLCFKLPDNVSLEEGAMCE-PLSV  169 (365)
Q Consensus        91 ~v~~~~~Gd~V~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~v~~~~~~~iP~~~~~~~a~~~~-~~~~  169 (365)
                      ++++|++||||++....                     .+ ...+|+|+||+++++++++++|+++++++|+.++ ...|
T Consensus        77 ~v~~~~vGdrV~~~~~~---------------------~g-~~~~G~~aey~~v~~~~~~~iP~~l~~~~aa~l~~~~~t  134 (330)
T 1tt7_A           77 NDPRFAEGDEVIATSYE---------------------LG-VSRDGGLSEYASVPGDWLVPLPQNLSLKEAMVYGTAGFT  134 (330)
T ss_dssp             SSTTCCTTCEEEEESTT---------------------BT-TTBCCSSBSSEEECGGGEEECCTTCCHHHHHHHHHHHHH
T ss_pred             CCCCCCCCCEEEEcccc---------------------cC-CCCCccceeEEEecHHHeEECCCCCCHHHHhhccchHHH
Confidence            46889999999875310                     01 1246999999999999999999999999999887 5667


Q ss_pred             HHHHH---HhcCCCCCC-EEEEEcC-CHHHHHHHHHHHHHCCCCeEEEEeCChhHHHHHHHcCCCEEEeCCCCcccHHHH
Q 017868          170 GLHAC---RRANIGPET-NVLIMGA-GPIGLVTMLGAPRAFGAPRIVIVDVDDYRLSVAKEIGADNIVKVSTNLQDIAEE  244 (365)
Q Consensus       170 a~~~~---~~~~~~~g~-~vlI~G~-g~~G~~ai~~l~~~~g~~~vi~v~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~  244 (365)
                      ||.++   ++.++++|+ +|||+|+ |++|++++| +++..|++ ++++++++++.++++++|++.++++.+.  + .+.
T Consensus       135 a~~~l~~~~~~~~~~g~~~VlV~Ga~G~vG~~~~q-~a~~~Ga~-vi~~~~~~~~~~~~~~lGa~~v~~~~~~--~-~~~  209 (330)
T 1tt7_A          135 AALSVHRLEQNGLSPEKGSVLVTGATGGVGGIAVS-MLNKRGYD-VVASTGNREAADYLKQLGASEVISREDV--Y-DGT  209 (330)
T ss_dssp             HHHHHHHHHHTTCCGGGCCEEEESTTSHHHHHHHH-HHHHHTCC-EEEEESSSSTHHHHHHHTCSEEEEHHHH--C-SSC
T ss_pred             HHHHHHHHHhcCcCCCCceEEEECCCCHHHHHHHH-HHHHCCCE-EEEEeCCHHHHHHHHHcCCcEEEECCCc--h-HHH
Confidence            77665   457889997 9999997 999999999 88999994 8888888999999999999998875321  0 011


Q ss_pred             HHHHHHHhCCCceEEEeCCCCHHHHHHHHHhcccCCEEEEEccCCC-CccccchHhhhcCcEEEeeccc-------CCcH
Q 017868          245 VEKIQKAMGTGIDVSFDCAGLNKTMSTALGATCAGGKVCLVGMGHH-EMTVPLTPAAVREVDVVGVFRY-------KNTW  316 (365)
Q Consensus       245 i~~~~~~~~~~~d~vid~~g~~~~~~~~~~~l~~~G~~~~~g~~~~-~~~~~~~~~~~~~~~i~~~~~~-------~~~~  316 (365)
                      +++.   .+.++|++||++|.+ .+..++++++++|+++.+|.... ...++...+..+++++.++...       .+.+
T Consensus       210 ~~~~---~~~~~d~vid~~g~~-~~~~~~~~l~~~G~iv~~G~~~~~~~~~~~~~~~~~~~~i~g~~~~~~~~~~~~~~~  285 (330)
T 1tt7_A          210 LKAL---SKQQWQGAVDPVGGK-QLASLLSKIQYGGSVAVSGLTGGGEVPATVYPFILRGVSLLGIDSVYCPMDVRAAVW  285 (330)
T ss_dssp             CCSS---CCCCEEEEEESCCTH-HHHHHHTTEEEEEEEEECCCSSCSCEEECSHHHHTSCCEEEECCSSSCCHHHHHHHH
T ss_pred             HHHh---hcCCccEEEECCcHH-HHHHHHHhhcCCCEEEEEecCCCCccCcchHHHHhcCeEEEEEeccccCHHHHHHHH
Confidence            1111   245899999999984 88999999999999999986543 2345555678899999997422       1234


Q ss_pred             HHHHHHHHcCCCCCCCceEEEecCChhhHHHHHHHHhcCCCceEEEEeC
Q 017868          317 PLCLELLRSGKIDVKPLVTHRFGFSQKEVEEAFETSARGGTAIKVMFNL  365 (365)
Q Consensus       317 ~~~~~~l~~g~~~~~~~~~~~~~~~~~~~~~a~~~~~~~~~~gk~vi~~  365 (365)
                      +++.+++++|.+  ++.++++|+|  +++.+|++.+++++..||+||++
T Consensus       286 ~~~~~~~~~g~l--~~~i~~~~~l--~~~~~A~~~~~~~~~~gKvvi~~  330 (330)
T 1tt7_A          286 ERMSSDLKPDQL--LTIVDREVSL--EETPGALKDILQNRIQGRVIVKL  330 (330)
T ss_dssp             HHTTTTSCCSCS--TTSEEEEECS--TTHHHHHHHTTTTCCSSEEEECC
T ss_pred             HHHHHHHhcCCc--ccccceEEcH--HHHHHHHHHHHcCCCCCeEEEeC
Confidence            556666667777  6788899999  99999999999888899999974

>3iup_A Putative NADPH:quinone oxidoreductase; YP_296108.1, structur genomics, joint center for structural genomics, JCSG, prote structure initiative; HET: MSE NDP; 1.70A {Ralstonia eutropha}

Probab=100.00  E-value=6.5e-46  Score=343.19  Aligned_cols=309  Identities=18%  Similarity=0.199  Sum_probs=250.2

Q ss_pred             hhcceeEEEe-cCCceEEEEecCCCCCCCcEEEEEeeeeeCcccHhhhhcccc-------CC------------------
Q 017868           15 EEVNMAAWLL-GVNTLKIQPFELPSLGPYDVLVRMKAVGICGSDVHYLKTLRC-------AD------------------   68 (365)
Q Consensus        15 ~~~~~~~~~~-~~~~l~~~~~~~p~~~~~eVlI~v~~~~l~~~D~~~~~g~~~-------~~------------------   68 (365)
                      ..+|++++.. ++..+++.++|.|+|+++||+|||.++++|++|++.+.|...       +.                  
T Consensus         5 ~~~mka~v~~~~~~~l~~~~~~~P~~~~~eVlVkv~a~gi~~~D~~~~~g~~~~~~~~~~g~~~~p~~~~~~p~~~~~~~   84 (379)
T 3iup_A            5 ALQLRSRIKSSGELELSLDSIDTPHPGPDEVLIRIEASPLNPSDLGLLFGAADMSTAKASGTAERPIVTARVPEGAMRSM   84 (379)
T ss_dssp             EEEEEEEECTTSEEEEEEEEEECCCCCTTEEEEEEEEEECCHHHHHHHHTTCEEEEEEEEECSSSEEEEEECCHHHHHHH
T ss_pred             hhhHHHHHhcCCCCceEEEeccCCCCCCCEEEEEEEEEecCHHHHHHhcCCccccccccccccccccccccCcccccccc
Confidence            4557777774 456899999999999999999999999999999999887421       00                  


Q ss_pred             -ccCCCCcccCccceEEEEEeCCCC-CCCCCCCEEEEcCCcCCCCCccccCCCCCCCCCccccccCCCCcceeeEEeecC
Q 017868           69 -FVVKEPMVIGHECAGVIEKVGSEV-KTLVPGDRVALEPGISCWRCDHCKGGRYNLCPEMKFFATPPVHGSLANQVVHPA  146 (365)
Q Consensus        69 -~~~~~p~~~G~e~~G~V~~vG~~v-~~~~~Gd~V~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~v~~  146 (365)
                       ....+|.++|||++|+|+++|++| ++|++||||++.                             ..|+|+||+++++
T Consensus        85 ~~~~~~p~i~G~e~~G~V~~vG~~v~~~~~vGdrV~~~-----------------------------~~G~~aey~~v~~  135 (379)
T 3iup_A           85 AGRLDASMPVGNEGAGVVVEAGSSPAAQALMGKTVAAI-----------------------------GGAMYSQYRCIPA  135 (379)
T ss_dssp             GGGTTEEEECCSCEEEEEEEECSSHHHHTTTTCEEEEC-----------------------------CSCCSBSEEEEEG
T ss_pred             ccccCCCccceeeeEEEEEEeCCCcccCCCCCCEEEec-----------------------------CCCcceeEEEeCH
Confidence             023568999999999999999999 899999999885                             3499999999999


Q ss_pred             CceEECCCCCCcchhccch-hhHHHHHHHHhcCCCCCCEEEEE--cCCHHHHHHHHHHHHHCCCCeEEEEeCChhHHHHH
Q 017868          147 DLCFKLPDNVSLEEGAMCE-PLSVGLHACRRANIGPETNVLIM--GAGPIGLVTMLGAPRAFGAPRIVIVDVDDYRLSVA  223 (365)
Q Consensus       147 ~~~~~iP~~~~~~~a~~~~-~~~~a~~~~~~~~~~~g~~vlI~--G~g~~G~~ai~~l~~~~g~~~vi~v~~~~~~~~~~  223 (365)
                      ++++++|+++++++|+.++ ...|||++++... ++|++|||+  |+|++|++++| +++..|+ +|++++++++|.+++
T Consensus       136 ~~~~~iP~~~~~~~aa~l~~~~~ta~~~~~~~~-~~g~~vlV~gag~G~vG~~a~q-~a~~~Ga-~Vi~~~~~~~~~~~~  212 (379)
T 3iup_A          136 DQCLVLPEGATPADGASSFVNPLTALGMVETMR-LEGHSALVHTAAASNLGQMLNQ-ICLKDGI-KLVNIVRKQEQADLL  212 (379)
T ss_dssp             GGEEECCTTCCHHHHTTSSHHHHHHHHHHHHHH-HTTCSCEEESSTTSHHHHHHHH-HHHHHTC-CEEEEESSHHHHHHH
T ss_pred             HHeEECCCCCCHHHHHhhhhhHHHHHHHHHHhc-cCCCEEEEECCCCCHHHHHHHH-HHHHCCC-EEEEEECCHHHHHHH
Confidence            9999999999999999775 6678898887665 899999999  45999999999 9999999 588888999999999


Q ss_pred             HHcCCCEEEeCCCCcccHHHHHHHHHHHhCCCceEEEeCCCCHHHHHHHHHhcc-----cC-----------CEEEEEcc
Q 017868          224 KEIGADNIVKVSTNLQDIAEEVEKIQKAMGTGIDVSFDCAGLNKTMSTALGATC-----AG-----------GKVCLVGM  287 (365)
Q Consensus       224 ~~~g~~~~~~~~~~~~~~~~~i~~~~~~~~~~~d~vid~~g~~~~~~~~~~~l~-----~~-----------G~~~~~g~  287 (365)
                      +++|++.++++..  +++.+.+++.+.  +.++|+||||+|.+.....++++++     ++           |+++.+|.
T Consensus       213 ~~lGa~~~~~~~~--~~~~~~v~~~t~--~~g~d~v~d~~g~~~~~~~~~~~l~~~~~r~~G~~~~~G~~~~g~iv~~G~  288 (379)
T 3iup_A          213 KAQGAVHVCNAAS--PTFMQDLTEALV--STGATIAFDATGGGKLGGQILTCMEAALNKSAREYSRYGSTTHKQVYLYGG  288 (379)
T ss_dssp             HHTTCSCEEETTS--TTHHHHHHHHHH--HHCCCEEEESCEEESHHHHHHHHHHHHHHTTCCSCCTTCCCSCEEEEECCC
T ss_pred             HhCCCcEEEeCCC--hHHHHHHHHHhc--CCCceEEEECCCchhhHHHHHHhcchhhhccccceeecccccCceEEEecC
Confidence            9999999988643  688888888765  5689999999998667777777775     33           56665554


Q ss_pred             CCCCccccchHhhhcCcEEEeeccc-----------CCcHHHHHHHHHcCCCCCCCceEEEecCChhhH--HHHHHHHhc
Q 017868          288 GHHEMTVPLTPAAVREVDVVGVFRY-----------KNTWPLCLELLRSGKIDVKPLVTHRFGFSQKEV--EEAFETSAR  354 (365)
Q Consensus       288 ~~~~~~~~~~~~~~~~~~i~~~~~~-----------~~~~~~~~~~l~~g~~~~~~~~~~~~~~~~~~~--~~a~~~~~~  354 (365)
                      ... ...+......+++++.+++..           .+.++++.+++++ .+  .+.++++|+|  +++  .+|++.+.+
T Consensus       289 ~~~-~~~~~~~~~~~~~~i~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~l--~~~i~~~~~l--~~~~~~~A~~~l~~  362 (379)
T 3iup_A          289 LDT-SPTEFNRNFGMAWGMGGWLLFPFLQKIGRERANALKQRVVAELKT-TF--ASHYSKEISL--AEVLDLDMIAVYNK  362 (379)
T ss_dssp             SEE-EEEEECCCSCSCEEEEECCHHHHHHHHCHHHHHHHHHHHHHTTTT-TT--CCCCSEEEEH--HHHTCHHHHHHHTT
T ss_pred             CCC-CccccccccccceEEEEEEeeeecccCCHHHHHHHHHHHHHHHhc-cC--CCcceEEecH--HHhhhHHHHHHHhc
Confidence            221 122334456688888886532           1234566666666 34  7788899999  999  999999999


Q ss_pred             CCCceEEEEeC
Q 017868          355 GGTAIKVMFNL  365 (365)
Q Consensus       355 ~~~~gk~vi~~  365 (365)
                      ++..||+||++
T Consensus       363 ~~~~gKvVv~~  373 (379)
T 3iup_A          363 RATGEKYLINP  373 (379)
T ss_dssp             CCTTCCEEEET
T ss_pred             CCCCceEEEeC
Confidence            99999999974

>2zb4_A Prostaglandin reductase 2; rossmann fold, alternative splicing, cytoplasm, NADP, oxidoreductase; HET: NAP 5OP; 1.63A {Homo sapiens} PDB: 2zb7_A* 2zb8_A* 2w98_A* 2vna_A* 2w4q_A* 1vj1_A 2zb3_A*

Probab=100.00  E-value=5.6e-44  Score=328.30  Aligned_cols=309  Identities=18%  Similarity=0.201  Sum_probs=253.0

Q ss_pred             chhcceeEEE-ecC--------CceEEEEecCCCC-CCCcEEEEEeeeeeCcccHhhhhccccCCc--cCCCCcccCccc
Q 017868           14 GEEVNMAAWL-LGV--------NTLKIQPFELPSL-GPYDVLVRMKAVGICGSDVHYLKTLRCADF--VVKEPMVIGHEC   81 (365)
Q Consensus        14 ~~~~~~~~~~-~~~--------~~l~~~~~~~p~~-~~~eVlI~v~~~~l~~~D~~~~~g~~~~~~--~~~~p~~~G~e~   81 (365)
                      ++++||++++ ..+        +.+++.++|.|+| +++||+|||.++++|+.|+..+.+.....+  +..+|.++|||+
T Consensus         5 ~~~~mka~v~~~~~~~~g~p~~~~l~~~~~~~P~~~~~~eVlVkv~a~gi~~~D~~~~~~~~g~~~~~~~~~p~v~G~E~   84 (357)
T 2zb4_A            5 AAMIVQRVVLNSRPGKNGNPVAENFRMEEVYLPDNINEGQVQVRTLYLSVDPYMRCRMNEDTGTDYITPWQLSQVVDGGG   84 (357)
T ss_dssp             -CCEEEEEEECCCCCTTSCCCGGGEEEEEEECCSCCCTTEEEEEEEEEECCTTHHHHTSSSCSSSSSCCCCBTSBCEEEE
T ss_pred             ccccceEEEEeccCCCCCCCCcCceEEEeecCCCCCCCCeEEEEEEEEecCHHHHhhccccccccccCCCCCCccccccE
Confidence            4567999999 443        5799999999999 999999999999999999887665210011  245688999999


Q ss_pred             eEEEEEeCCCCCCCCCCCEEEEcCCcCCCCCccccCCCCCCCCCccccccCCCCcceeeEEeecCCceEECCCCC-----
Q 017868           82 AGVIEKVGSEVKTLVPGDRVALEPGISCWRCDHCKGGRYNLCPEMKFFATPPVHGSLANQVVHPADLCFKLPDNV-----  156 (365)
Q Consensus        82 ~G~V~~vG~~v~~~~~Gd~V~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~v~~~~~~~iP~~~-----  156 (365)
                      +|+|++  ++|++|++||||++.                              .|+|+||+++++++++++|+++     
T Consensus        85 ~G~V~~--~~v~~~~vGdrV~~~------------------------------~G~~aey~~v~~~~~~~iP~~~~~~~~  132 (357)
T 2zb4_A           85 IGIIEE--SKHTNLTKGDFVTSF------------------------------YWPWQTKVILDGNSLEKVDPQLVDGHL  132 (357)
T ss_dssp             EEEEEE--ECSTTCCTTCEEEEE------------------------------EEESBSEEEEEGGGCEECCGGGGTTCG
T ss_pred             EEEEEe--cCCCCCCCCCEEEec------------------------------CCCcEEEEEEchHHceecCcccccCch
Confidence            999999  889999999999874                              2899999999999999999999     


Q ss_pred             CcchhccchhhHHHHHHH-HhcCCCCC--CEEEEEcC-CHHHHHHHHHHHHHCCCCeEEEEeCChhHHHHHHH-cCCCEE
Q 017868          157 SLEEGAMCEPLSVGLHAC-RRANIGPE--TNVLIMGA-GPIGLVTMLGAPRAFGAPRIVIVDVDDYRLSVAKE-IGADNI  231 (365)
Q Consensus       157 ~~~~a~~~~~~~~a~~~~-~~~~~~~g--~~vlI~G~-g~~G~~ai~~l~~~~g~~~vi~v~~~~~~~~~~~~-~g~~~~  231 (365)
                      +++.|++..++.|||+++ +.+++++|  ++|||+|+ |++|++++| +++..|+++|+++++++++.+.+++ +|++.+
T Consensus       133 ~~~~a~l~~~~~ta~~al~~~~~~~~g~~~~vlI~GasggiG~~~~~-~a~~~Ga~~Vi~~~~~~~~~~~~~~~~g~~~~  211 (357)
T 2zb4_A          133 SYFLGAIGMPGLTSLIGIQEKGHITAGSNKTMVVSGAAGACGSVAGQ-IGHFLGCSRVVGICGTHEKCILLTSELGFDAA  211 (357)
T ss_dssp             GGGGTTTSHHHHHHHHHHHHHSCCCTTSCCEEEESSTTBHHHHHHHH-HHHHTTCSEEEEEESCHHHHHHHHHTSCCSEE
T ss_pred             hHHHHhcccHHHHHHHHHHHhcCCCCCCccEEEEECCCcHHHHHHHH-HHHHCCCCeEEEEeCCHHHHHHHHHHcCCceE
Confidence            666555556899999999 67999999  99999997 999999999 8889999678888899999888876 999988


Q ss_pred             EeCCCCcccHHHHHHHHHHHhCCCceEEEeCCCCHHHHHHHHHhcccCCEEEEEccCCCC-ccccc---------hHhhh
Q 017868          232 VKVSTNLQDIAEEVEKIQKAMGTGIDVSFDCAGLNKTMSTALGATCAGGKVCLVGMGHHE-MTVPL---------TPAAV  301 (365)
Q Consensus       232 ~~~~~~~~~~~~~i~~~~~~~~~~~d~vid~~g~~~~~~~~~~~l~~~G~~~~~g~~~~~-~~~~~---------~~~~~  301 (365)
                      +++..  +++.+.+++.+   ++++|++||++|. ..+..++++++++|+++.+|..... ...+.         ..+..
T Consensus       212 ~d~~~--~~~~~~~~~~~---~~~~d~vi~~~G~-~~~~~~~~~l~~~G~iv~~G~~~~~~~~~~~~~~~~~~~~~~~~~  285 (357)
T 2zb4_A          212 INYKK--DNVAEQLRESC---PAGVDVYFDNVGG-NISDTVISQMNENSHIILCGQISQYNKDVPYPPPLSPAIEAIQKE  285 (357)
T ss_dssp             EETTT--SCHHHHHHHHC---TTCEEEEEESCCH-HHHHHHHHTEEEEEEEEECCCGGGTTSCCCSSCCCCHHHHHHHHH
T ss_pred             EecCc--hHHHHHHHHhc---CCCCCEEEECCCH-HHHHHHHHHhccCcEEEEECCccccccCccccccchhhhhhhhhc
Confidence            87643  56767666653   3389999999996 5889999999999999999854321 11221         35678


Q ss_pred             cCcEEEeeccc------CCcHHHHHHHHHcCCCCCCCceEEEecCChhhHHHHHHHHhcCCCceEEEEeC
Q 017868          302 REVDVVGVFRY------KNTWPLCLELLRSGKIDVKPLVTHRFGFSQKEVEEAFETSARGGTAIKVMFNL  365 (365)
Q Consensus       302 ~~~~i~~~~~~------~~~~~~~~~~l~~g~~~~~~~~~~~~~~~~~~~~~a~~~~~~~~~~gk~vi~~  365 (365)
                      +++++.+++..      .+.++++++++++|++.  +.+..+|+|  +++.+|++.+.+++..||+|+++
T Consensus       286 ~~~~i~g~~~~~~~~~~~~~~~~~~~l~~~g~l~--~~~~~~~~l--~~~~~A~~~~~~~~~~gKvvi~~  351 (357)
T 2zb4_A          286 RNITRERFLVLNYKDKFEPGILQLSQWFKEGKLK--IKETVINGL--ENMGAAFQSMMTGGNIGKQIVCI  351 (357)
T ss_dssp             HTCEEEECCGGGGGGGHHHHHHHHHHHHHTTCCC--CCEEEEECG--GGHHHHHHHHHTTCCSBEEEEEC
T ss_pred             ceeEEEEeehhhhhHHHHHHHHHHHHHHHcCCCc--CccceecCH--HHHHHHHHHHHcCCCCceEEEEE
Confidence            89999997542      34688999999999994  445566888  99999999999988899999974

>1xa0_A Putative NADPH dependent oxidoreductases; structural genomics, protein structure initiative, MCSG; HET: DTY; 2.80A {Geobacillus stearothermophilus} SCOP: b.35.1.2 c.2.1.1

Probab=100.00  E-value=5.6e-45  Score=331.18  Aligned_cols=309  Identities=19%  Similarity=0.223  Sum_probs=245.3

Q ss_pred             hcceeEEEecCC---ceEEEEecCCCCCCCcEEEEEeeeeeCcccHhhhhccccCCccCCCCcccCccceEEEEEeCCCC
Q 017868           16 EVNMAAWLLGVN---TLKIQPFELPSLGPYDVLVRMKAVGICGSDVHYLKTLRCADFVVKEPMVIGHECAGVIEKVGSEV   92 (365)
Q Consensus        16 ~~~~~~~~~~~~---~l~~~~~~~p~~~~~eVlI~v~~~~l~~~D~~~~~g~~~~~~~~~~p~~~G~e~~G~V~~vG~~v   92 (365)
                      .+||++++.+++   .+++.++|.|+|+++||+|||.++++|++|++...|...  ....+|.++|||++|+|+++  ++
T Consensus         2 ~~mka~~~~~~g~~~~l~~~~~~~p~~~~~eVlVkv~a~gi~~~D~~~~~g~~~--~~~~~p~v~G~E~~G~V~~~--~v   77 (328)
T 1xa0_A            2 SAFQAFVVNKTETEFTAGVQTISMDDLPEGDVLVRVHYSSVNYKDGLASIPDGK--IVKTYPFVPGIDLAGVVVSS--QH   77 (328)
T ss_dssp             CEEEEEEEEEETTEEEEEEEEEEGGGSCSCSEEEEEEEEECCHHHHHHTSGGGS--SCCSSSBCCCSEEEEEEEEC--CS
T ss_pred             CcceEEEEecCCCcceeEEEeccCCCCCCCeEEEEEEEEecCHHHHHhhcCCCC--CCCCCCcccCcceEEEEEec--CC
Confidence            468999998765   789999999999999999999999999999998887532  12357899999999999995  57


Q ss_pred             CCCCCCCEEEEcCCcCCCCCccccCCCCCCCCCccccccCCCCcceeeEEeecCCceEECCCCCCcchhccch-hhHHHH
Q 017868           93 KTLVPGDRVALEPGISCWRCDHCKGGRYNLCPEMKFFATPPVHGSLANQVVHPADLCFKLPDNVSLEEGAMCE-PLSVGL  171 (365)
Q Consensus        93 ~~~~~Gd~V~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~v~~~~~~~iP~~~~~~~a~~~~-~~~~a~  171 (365)
                      ++|++||||++....                     .+ ...+|+|+||+++++++++++|+++++++|+.++ ...|||
T Consensus        78 ~~~~vGdrV~~~~~~---------------------~g-~~~~G~~aey~~v~~~~~~~~P~~l~~~~aa~~~~~~~ta~  135 (328)
T 1xa0_A           78 PRFREGDEVIATGYE---------------------IG-VTHFGGYSEYARLHGEWLVPLPKGLTLKEAMAIGTAGFTAA  135 (328)
T ss_dssp             SSCCTTCEEEEESTT---------------------BT-TTBCCSSBSEEEECGGGCEECCTTCCHHHHHHHHHHHHHHH
T ss_pred             CCCCCCCEEEEcccc---------------------CC-CCCCccceeEEEechHHeEECCCCCCHHHhhhhhhhHHHHH
Confidence            889999999875210                     01 1246999999999999999999999999999887 566777


Q ss_pred             HHH---HhcCCCCCC-EEEEEcC-CHHHHHHHHHHHHHCCCCeEEEEeCChhHHHHHHHcCCCEEEeCCCCcccHHHHHH
Q 017868          172 HAC---RRANIGPET-NVLIMGA-GPIGLVTMLGAPRAFGAPRIVIVDVDDYRLSVAKEIGADNIVKVSTNLQDIAEEVE  246 (365)
Q Consensus       172 ~~~---~~~~~~~g~-~vlI~G~-g~~G~~ai~~l~~~~g~~~vi~v~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~i~  246 (365)
                      .++   ++.++++|+ +|||+|+ |++|++++| +++..|+ +|+++++++++.++++++|++.++++.+.  + .+.++
T Consensus       136 ~~l~~~~~~~~~~g~~~VlV~Ga~G~vG~~~~q-~a~~~Ga-~vi~~~~~~~~~~~~~~lGa~~~i~~~~~--~-~~~~~  210 (328)
T 1xa0_A          136 LSIHRLEEHGLTPERGPVLVTGATGGVGSLAVS-MLAKRGY-TVEASTGKAAEHDYLRVLGAKEVLAREDV--M-AERIR  210 (328)
T ss_dssp             HHHHHHHHTTCCGGGCCEEESSTTSHHHHHHHH-HHHHTTC-CEEEEESCTTCHHHHHHTTCSEEEECC-----------
T ss_pred             HHHHHHhhcCCCCCCceEEEecCCCHHHHHHHH-HHHHCCC-EEEEEECCHHHHHHHHHcCCcEEEecCCc--H-HHHHH
Confidence            665   457889997 9999997 999999999 9999999 58888888999999999999998886432  1 22233


Q ss_pred             HHHHHhCCCceEEEeCCCCHHHHHHHHHhcccCCEEEEEccCCC-CccccchHhhhcCcEEEeeccc--C-----CcHHH
Q 017868          247 KIQKAMGTGIDVSFDCAGLNKTMSTALGATCAGGKVCLVGMGHH-EMTVPLTPAAVREVDVVGVFRY--K-----NTWPL  318 (365)
Q Consensus       247 ~~~~~~~~~~d~vid~~g~~~~~~~~~~~l~~~G~~~~~g~~~~-~~~~~~~~~~~~~~~i~~~~~~--~-----~~~~~  318 (365)
                      +.   .+.++|++||++|.. .+..++++++++|+++.+|.... ...++...+..+++++.++...  .     +.+++
T Consensus       211 ~~---~~~~~d~vid~~g~~-~~~~~~~~l~~~G~~v~~G~~~~~~~~~~~~~~~~~~~~i~g~~~~~~~~~~~~~~~~~  286 (328)
T 1xa0_A          211 PL---DKQRWAAAVDPVGGR-TLATVLSRMRYGGAVAVSGLTGGAEVPTTVHPFILRGVSLLGIDSVYCPMDLRLRIWER  286 (328)
T ss_dssp             -C---CSCCEEEEEECSTTT-THHHHHHTEEEEEEEEECSCCSSSCCCCCSHHHHHTTCEEEECCSSSCCHHHHHHHHHH
T ss_pred             Hh---cCCcccEEEECCcHH-HHHHHHHhhccCCEEEEEeecCCCCCCCchhhhhhcCceEEEEecccCCHHHHHHHHHH
Confidence            22   246899999999985 78899999999999999986543 3344555677899999997422  1     23455


Q ss_pred             HHHHHHcCCCCCCCceEEEecCChhhHHHHHHHHhcCCCceEEEEeC
Q 017868          319 CLELLRSGKIDVKPLVTHRFGFSQKEVEEAFETSARGGTAIKVMFNL  365 (365)
Q Consensus       319 ~~~~l~~g~~~~~~~~~~~~~~~~~~~~~a~~~~~~~~~~gk~vi~~  365 (365)
                      +.++++++ +  ++ ++++|+|  +++.+|++.+++++..||+||++
T Consensus       287 ~~~~~~~g-l--~~-~~~~~~l--~~~~~A~~~~~~~~~~gKvvv~~  327 (328)
T 1xa0_A          287 LAGDLKPD-L--ER-IAQEISL--AELPQALKRILRGELRGRTVVRL  327 (328)
T ss_dssp             HHTTTCCC-H--HH-HEEEEEG--GGHHHHHHHHHHTCCCSEEEEEC
T ss_pred             HHHHHHcC-C--ce-eeeEeCH--HHHHHHHHHHHcCCCCCeEEEEe
Confidence            55666666 5  44 3689999  99999999999888899999974

>1iz0_A Quinone oxidoreductase; APO-enzyme, riken structural genomics/proteomics initiative, RSGI, structural genomics; 2.30A {Thermus thermophilus} SCOP: b.35.1.2 c.2.1.1 PDB: 1iyz_A 2cf2_D

Probab=100.00  E-value=6.7e-43  Score=313.77  Aligned_cols=289  Identities=25%  Similarity=0.354  Sum_probs=239.6

Q ss_pred             ceeEEEecCCc-eEEEEecCCCCCCCcEEEEEeeeeeCcccHhhhhccccCCccCCCCcccCccceEEEEEeCCCCCCCC
Q 017868           18 NMAAWLLGVNT-LKIQPFELPSLGPYDVLVRMKAVGICGSDVHYLKTLRCADFVVKEPMVIGHECAGVIEKVGSEVKTLV   96 (365)
Q Consensus        18 ~~~~~~~~~~~-l~~~~~~~p~~~~~eVlI~v~~~~l~~~D~~~~~g~~~~~~~~~~p~~~G~e~~G~V~~vG~~v~~~~   96 (365)
                      ||++++.+++. ..+.+.|.|+|+++||+|||.++++|++|++...|.+..  ...+|.++|||++|+|+          
T Consensus         1 Mka~~~~~~g~~~~l~~~~~p~~~~~eVlVkv~a~gi~~~D~~~~~g~~~~--~~~~p~i~G~e~~G~V~----------   68 (302)
T 1iz0_A            1 MKAWVLKRLGGPLELVDLPEPEAEEGEVVLRVEAVGLNFADHLMRLGAYLT--RLHPPFIPGMEVVGVVE----------   68 (302)
T ss_dssp             CEEEEECSTTSCEEEEECCCCCCCTTEEEEEEEEEEECHHHHHHHHTCSSS--CCCSSBCCCCEEEEEET----------
T ss_pred             CeEEEEcCCCCchheEECCCCCCCCCEEEEEEEEEecCHHHHHHhCCCCCC--CCCCCCcccceEEEEEE----------
Confidence            67888887653 346699999999999999999999999999998875322  13578999999999997          


Q ss_pred             CCCEEEEcCCcCCCCCccccCCCCCCCCCccccccCCCCcceeeEEeecCCceEECCCCCCcchhccch-hhHHHHHHHH
Q 017868           97 PGDRVALEPGISCWRCDHCKGGRYNLCPEMKFFATPPVHGSLANQVVHPADLCFKLPDNVSLEEGAMCE-PLSVGLHACR  175 (365)
Q Consensus        97 ~Gd~V~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~v~~~~~~~iP~~~~~~~a~~~~-~~~~a~~~~~  175 (365)
                       ||||++..                            .+|+|+||+++++++++++|+++++++|+.++ ++.|||+++.
T Consensus        69 -GdrV~~~~----------------------------~~G~~aey~~v~~~~~~~iP~~~~~~~aa~l~~~~~ta~~~l~  119 (302)
T 1iz0_A           69 -GRRYAALV----------------------------PQGGLAERVAVPKGALLPLPEGLSPEEAAAFPVSFLTAYLALK  119 (302)
T ss_dssp             -TEEEEEEC----------------------------SSCCSBSEEEEEGGGCEECCTTCCHHHHHTSHHHHHHHHHHHH
T ss_pred             -CcEEEEec----------------------------CCcceeeEEEEcHHHcEeCCCCCCHHHHHHhhhHHHHHHHHHH
Confidence             99998862                            35999999999999999999999999988776 8999999995


Q ss_pred             -hcCCCCCCEEEEEcC-CHHHHHHHHHHHHHCCCCeEEEEeCChhHHHHHHHcCCCEEEeCCCCcccHHHHHHHHHHHhC
Q 017868          176 -RANIGPETNVLIMGA-GPIGLVTMLGAPRAFGAPRIVIVDVDDYRLSVAKEIGADNIVKVSTNLQDIAEEVEKIQKAMG  253 (365)
Q Consensus       176 -~~~~~~g~~vlI~G~-g~~G~~ai~~l~~~~g~~~vi~v~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~i~~~~~~~~  253 (365)
                       .+ +++|++|||+|+ |++|++++| +++..|+ +|+++++++++.++++++|++.++++.. .+++.+.+        
T Consensus       120 ~~~-~~~g~~vlV~Ga~G~vG~~~~~-~a~~~Ga-~Vi~~~~~~~~~~~~~~~ga~~~~~~~~-~~~~~~~~--------  187 (302)
T 1iz0_A          120 RAQ-ARPGEKVLVQAAAGALGTAAVQ-VARAMGL-RVLAAASRPEKLALPLALGAEEAATYAE-VPERAKAW--------  187 (302)
T ss_dssp             HTT-CCTTCEEEESSTTBHHHHHHHH-HHHHTTC-EEEEEESSGGGSHHHHHTTCSEEEEGGG-HHHHHHHT--------
T ss_pred             Hhc-CCCCCEEEEECCCcHHHHHHHH-HHHHCCC-EEEEEeCCHHHHHHHHhcCCCEEEECCc-chhHHHHh--------
Confidence             56 999999999997 999999999 8899999 7889999999999999999998877431 02332221        


Q ss_pred             CCceEEEeCCCCHHHHHHHHHhcccCCEEEEEccCCCC-ccccchHhhhcCcEEEeecc-----cCCcHHHHHH---HHH
Q 017868          254 TGIDVSFDCAGLNKTMSTALGATCAGGKVCLVGMGHHE-MTVPLTPAAVREVDVVGVFR-----YKNTWPLCLE---LLR  324 (365)
Q Consensus       254 ~~~d~vid~~g~~~~~~~~~~~l~~~G~~~~~g~~~~~-~~~~~~~~~~~~~~i~~~~~-----~~~~~~~~~~---~l~  324 (365)
                      .++|++|| +|. ..+..++++++++|+++.+|..... ..++...+..+++++.++..     ..+.++++++   +++
T Consensus       188 ~~~d~vid-~g~-~~~~~~~~~l~~~G~~v~~g~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~~l~~  265 (302)
T 1iz0_A          188 GGLDLVLE-VRG-KEVEESLGLLAHGGRLVYIGAAEGEVAPIPPLRLMRRNLAVLGFWLTPLLREGALVEEALGFLLPRL  265 (302)
T ss_dssp             TSEEEEEE-CSC-TTHHHHHTTEEEEEEEEEC-------CCCCTTHHHHTTCEEEECCHHHHTTCHHHHHHHHHHHGGGB
T ss_pred             cCceEEEE-CCH-HHHHHHHHhhccCCEEEEEeCCCCCCCCcCHHHHHhCCCeEEEEeccchhhhHHHHHHHHhhhHHHH
Confidence            58999999 998 4888999999999999999865432 24555667889999999763     2456888999   999


Q ss_pred             cCCCCCCCceEEEecCChhhHHHHHHHHhcCCCceEEEEeC
Q 017868          325 SGKIDVKPLVTHRFGFSQKEVEEAFETSARGGTAIKVMFNL  365 (365)
Q Consensus       325 ~g~~~~~~~~~~~~~~~~~~~~~a~~~~~~~~~~gk~vi~~  365 (365)
                      +|++  ++.++++|++  +++.+|++.+.+++..||+|+++
T Consensus       266 ~g~l--~~~i~~~~~l--~~~~~A~~~~~~~~~~gKvvv~~  302 (302)
T 1iz0_A          266 GREL--RPVVGPVFPF--AEAEAAFRALLDRGHTGKVVVRL  302 (302)
T ss_dssp             TTTB--CCCEEEEEEG--GGHHHHHHHTTCTTCCBEEEEEC
T ss_pred             cCCc--ccccceEEcH--HHHHHHHHHHHcCCCCceEEEeC
Confidence            9998  6788899999  99999999999888899999874

>2j3h_A NADP-dependent oxidoreductase P1; double bond reductase (AT5G16970), APO form; 2.5A {Arabidopsis thaliana} PDB: 2j3i_A* 2j3j_A* 2j3k_A*

Probab=100.00  E-value=1.4e-41  Score=310.97  Aligned_cols=307  Identities=17%  Similarity=0.151  Sum_probs=246.0

Q ss_pred             hcceeEEEe-----cCC--ceEEE--EecCCC-CCCCcEEEEEeeeeeCcccHhhhhccccCC-ccCCCCcccCccceEE
Q 017868           16 EVNMAAWLL-----GVN--TLKIQ--PFELPS-LGPYDVLVRMKAVGICGSDVHYLKTLRCAD-FVVKEPMVIGHECAGV   84 (365)
Q Consensus        16 ~~~~~~~~~-----~~~--~l~~~--~~~~p~-~~~~eVlI~v~~~~l~~~D~~~~~g~~~~~-~~~~~p~~~G~e~~G~   84 (365)
                      .+||++++.     +++  .+++.  ++|.|. |+++||||||.++++|+.|. ...|..... ....+|.++|||++|+
T Consensus         3 ~~mka~~m~a~~~~~p~~~~l~~~~~~~~~P~~~~~~eVlVkv~a~g~~~~~~-~~~g~~~~~~~~~~~p~v~G~e~~G~   81 (345)
T 2j3h_A            3 ATNKQVILKDYVSGFPTESDFDFTTTTVELRVPEGTNSVLVKNLYLSCDPYMR-IRMGKPDPSTAALAQAYTPGQPIQGY   81 (345)
T ss_dssp             EEEEEEEECSCBSSSCCGGGEEEEEEEEECCSCSSSSCEEEEECEEECCTTHH-HHHBC---------CCCCTTSBCEEE
T ss_pred             ccceEEEEecCCCCCCCccceeEEEeecCCCCCCCCCEEEEEEEEecCCHHHH-hhcccCCCCccccCCCcCCCCeeecc
Confidence            345665544     455  69998  889997 89999999999999999885 344432110 0024689999999999


Q ss_pred             EEE--eCCCCCCCCCCCEEEEcCCcCCCCCccccCCCCCCCCCccccccCCCCcceeeEEeecCCc--eEECCC---CCC
Q 017868           85 IEK--VGSEVKTLVPGDRVALEPGISCWRCDHCKGGRYNLCPEMKFFATPPVHGSLANQVVHPADL--CFKLPD---NVS  157 (365)
Q Consensus        85 V~~--vG~~v~~~~~Gd~V~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~v~~~~--~~~iP~---~~~  157 (365)
                      +.+  +|+++++|++||||++.                               |+|+||+.+++..  ++++|+   +++
T Consensus        82 ~~~GvV~~~v~~~~vGdrV~~~-------------------------------g~~aey~~v~~~~~~~~~ip~~~~~~~  130 (345)
T 2j3h_A           82 GVSRIIESGHPDYKKGDLLWGI-------------------------------VAWEEYSVITPMTHAHFKIQHTDVPLS  130 (345)
T ss_dssp             EEEEEEEECSTTCCTTCEEEEE-------------------------------EESBSEEEECCCTTTCEEECCCSSCTT
T ss_pred             eEEEEEecCCCCCCCCCEEEee-------------------------------cCceeEEEecccccceeecCCCCCCHH
Confidence            999  99999999999999864                               8899999999876  999996   456


Q ss_pred             cchhccchhhHHHHHHH-HhcCCCCCCEEEEEcC-CHHHHHHHHHHHHHCCCCeEEEEeCChhHHHHHH-HcCCCEEEeC
Q 017868          158 LEEGAMCEPLSVGLHAC-RRANIGPETNVLIMGA-GPIGLVTMLGAPRAFGAPRIVIVDVDDYRLSVAK-EIGADNIVKV  234 (365)
Q Consensus       158 ~~~a~~~~~~~~a~~~~-~~~~~~~g~~vlI~G~-g~~G~~ai~~l~~~~g~~~vi~v~~~~~~~~~~~-~~g~~~~~~~  234 (365)
                      ++.|++..++.|||+++ +.+++++|++|||+|+ |++|++++| +++..|+ +|+++++++++.+.++ ++|++.++++
T Consensus       131 ~~aa~l~~~~~ta~~al~~~~~~~~g~~vlI~Ga~g~iG~~~~~-~a~~~G~-~V~~~~~~~~~~~~~~~~~g~~~~~d~  208 (345)
T 2j3h_A          131 YYTGLLGMPGMTAYAGFYEVCSPKEGETVYVSAASGAVGQLVGQ-LAKMMGC-YVVGSAGSKEKVDLLKTKFGFDDAFNY  208 (345)
T ss_dssp             GGGTTTSHHHHHHHHHHHTTSCCCTTCEEEESSTTSHHHHHHHH-HHHHTTC-EEEEEESSHHHHHHHHHTSCCSEEEET
T ss_pred             HHHHhccccHHHHHHHHHHHhCCCCCCEEEEECCCcHHHHHHHH-HHHHCCC-EEEEEeCCHHHHHHHHHHcCCceEEec
Confidence            66444445899999999 5689999999999997 999999999 8899999 6888989999999997 7999988876


Q ss_pred             CCCcccHHHHHHHHHHHhCCCceEEEeCCCCHHHHHHHHHhcccCCEEEEEccCCC------CccccchHhhhcCcEEEe
Q 017868          235 STNLQDIAEEVEKIQKAMGTGIDVSFDCAGLNKTMSTALGATCAGGKVCLVGMGHH------EMTVPLTPAAVREVDVVG  308 (365)
Q Consensus       235 ~~~~~~~~~~i~~~~~~~~~~~d~vid~~g~~~~~~~~~~~l~~~G~~~~~g~~~~------~~~~~~~~~~~~~~~i~~  308 (365)
                      .+ ..++.+.+++..   ++++|++||++|. ..+..++++++++|+++.+|....      ...++...+..+++++.+
T Consensus       209 ~~-~~~~~~~~~~~~---~~~~d~vi~~~g~-~~~~~~~~~l~~~G~~v~~G~~~~~~~~~~~~~~~~~~~~~~~~~i~g  283 (345)
T 2j3h_A          209 KE-ESDLTAALKRCF---PNGIDIYFENVGG-KMLDAVLVNMNMHGRIAVCGMISQYNLENQEGVHNLSNIIYKRNRIQG  283 (345)
T ss_dssp             TS-CSCSHHHHHHHC---TTCEEEEEESSCH-HHHHHHHTTEEEEEEEEECCCGGGTTCSSCCCBSCTTHHHHHTCEEEE
T ss_pred             CC-HHHHHHHHHHHh---CCCCcEEEECCCH-HHHHHHHHHHhcCCEEEEEccccccccCCccccccHHHHhhhceeece
Confidence            43 236666666542   4689999999997 588899999999999999985432      234455667889999998


Q ss_pred             ecccC------CcHHHHHHHHHcCCCCCCCceEEEecCChhhHHHHHHHHhcCCCceEEEEeC
Q 017868          309 VFRYK------NTWPLCLELLRSGKIDVKPLVTHRFGFSQKEVEEAFETSARGGTAIKVMFNL  365 (365)
Q Consensus       309 ~~~~~------~~~~~~~~~l~~g~~~~~~~~~~~~~~~~~~~~~a~~~~~~~~~~gk~vi~~  365 (365)
                      ++...      +.++++++++++|++  ++.+.+.|+|  +++.+|++.+++++..||+|+++
T Consensus       284 ~~~~~~~~~~~~~~~~~~~l~~~g~i--~~~~~~~~~l--~~~~~A~~~~~~~~~~gKvvv~~  342 (345)
T 2j3h_A          284 FVVSDFYDKYSKFLEFVLPHIREGKI--TYVEDVADGL--EKAPEALVGLFHGKNVGKQVVVV  342 (345)
T ss_dssp             CCGGGGGGGHHHHHHHHHHHHHTTSS--CCCEEEEESG--GGSHHHHHHHHTTCCSSEEEEES
T ss_pred             eeehhhhhhHHHHHHHHHHHHHCCCC--cCcccccCCH--HHHHHHHHHHHcCCCceEEEEEe
Confidence            76532      238899999999999  5677778888  99999999999998999999974

>1v3u_A Leukotriene B4 12- hydroxydehydrogenase/prostaglandin 15-keto reductase; rossmann fold, riken structural genomics/proteomics initiative, RSGI; 2.00A {Cavia porcellus} SCOP: b.35.1.2 c.2.1.1 PDB: 1v3t_A 1v3v_A* 2dm6_A* 1zsv_A 2y05_A*

Probab=100.00  E-value=1.4e-40  Score=302.80  Aligned_cols=300  Identities=18%  Similarity=0.178  Sum_probs=243.8

Q ss_pred             hhcceeEEEecC-------CceEEEEecCCCCCCCcEEEEEeeeeeCcccHhhhhccccCCccCCCCcccCccceEEEEE
Q 017868           15 EEVNMAAWLLGV-------NTLKIQPFELPSLGPYDVLVRMKAVGICGSDVHYLKTLRCADFVVKEPMVIGHECAGVIEK   87 (365)
Q Consensus        15 ~~~~~~~~~~~~-------~~l~~~~~~~p~~~~~eVlI~v~~~~l~~~D~~~~~g~~~~~~~~~~p~~~G~e~~G~V~~   87 (365)
                      +++|+++++...       +.+++.++|.|+|+++||+|||.++++|+.|... .      .+..+|.++|||++|+|++
T Consensus         5 ~~~mka~~~~~~~~g~~~~~~l~~~e~~~P~~~~~eVlVkv~a~gi~~~~~~~-~------~~~~~p~~~g~e~~G~Vv~   77 (333)
T 1v3u_A            5 MVKAKSWTLKKHFQGKPTQSDFELKTVELPPLKNGEVLLEALFLSVDPYMRIA-S------KRLKEGAVMMGQQVARVVE   77 (333)
T ss_dssp             CCEEEEEEECC-----CCGGGEEEEEEECCCCCTTCEEEEEEEEECCTHHHHH-T------TTCCTTSBCCCCEEEEEEE
T ss_pred             cccccEEEEeecCCCCCCccceEEEeCCCCCCCCCEEEEEEEEeccCHHHccc-c------CcCCCCcccccceEEEEEe
Confidence            345888888752       5799999999999999999999999999988632 1      1245678999999999999


Q ss_pred             eCCCCCCCCCCCEEEEcCCcCCCCCccccCCCCCCCCCccccccCCCCcceeeEEeecCCceEECCCC----CCcchh-c
Q 017868           88 VGSEVKTLVPGDRVALEPGISCWRCDHCKGGRYNLCPEMKFFATPPVHGSLANQVVHPADLCFKLPDN----VSLEEG-A  162 (365)
Q Consensus        88 vG~~v~~~~~Gd~V~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~v~~~~~~~iP~~----~~~~~a-~  162 (365)
                      .  ++++|++||||++.                               |+|+||+++++++++++|++    ++++++ +
T Consensus        78 ~--~v~~~~vGdrV~~~-------------------------------g~~aey~~v~~~~~~~iP~~~~~~~~~~~a~a  124 (333)
T 1v3u_A           78 S--KNSAFPAGSIVLAQ-------------------------------SGWTTHFISDGKGLEKLLTEWPDKLPLSLALG  124 (333)
T ss_dssp             E--SCTTSCTTCEEEEC-------------------------------CCSBSEEEESSTTEEECC--CCTTSCGGGGGT
T ss_pred             c--CCCCCCCCCEEEec-------------------------------CceEEEEEechHHeEEcCcccccCCCHHHHHH
Confidence            5  67899999999864                               88999999999999999997    888863 4


Q ss_pred             cc-hhhHHHHHHH-HhcCCCCCCEEEEEcC-CHHHHHHHHHHHHHCCCCeEEEEeCChhHHHHHHHcCCCEEEeCCCCcc
Q 017868          163 MC-EPLSVGLHAC-RRANIGPETNVLIMGA-GPIGLVTMLGAPRAFGAPRIVIVDVDDYRLSVAKEIGADNIVKVSTNLQ  239 (365)
Q Consensus       163 ~~-~~~~~a~~~~-~~~~~~~g~~vlI~G~-g~~G~~ai~~l~~~~g~~~vi~v~~~~~~~~~~~~~g~~~~~~~~~~~~  239 (365)
                      .+ .++.|||+++ +.+++++|++|||+|+ |++|+++++ +++..|+ +|+++++++++.+.++++|++.++++.+ .+
T Consensus       125 ~l~~~~~ta~~al~~~~~~~~g~~vlV~Ga~ggiG~~~~~-~~~~~G~-~V~~~~~~~~~~~~~~~~g~~~~~d~~~-~~  201 (333)
T 1v3u_A          125 TIGMPGLTAYFGLLEVCGVKGGETVLVSAAAGAVGSVVGQ-IAKLKGC-KVVGAAGSDEKIAYLKQIGFDAAFNYKT-VN  201 (333)
T ss_dssp             TTSHHHHHHHHHHHTTSCCCSSCEEEEESTTBHHHHHHHH-HHHHTTC-EEEEEESSHHHHHHHHHTTCSEEEETTS-CS
T ss_pred             HhCChHHHHHHHHHHhhCCCCCCEEEEecCCCcHHHHHHH-HHHHCCC-EEEEEeCCHHHHHHHHhcCCcEEEecCC-HH
Confidence            44 5899999999 5689999999999997 999999999 8889999 6888888999999999999988877542 15


Q ss_pred             cHHHHHHHHHHHhCCCceEEEeCCCCHHHHHHHHHhcccCCEEEEEccCCC------C-ccccchHhhhcCcEEEeeccc
Q 017868          240 DIAEEVEKIQKAMGTGIDVSFDCAGLNKTMSTALGATCAGGKVCLVGMGHH------E-MTVPLTPAAVREVDVVGVFRY  312 (365)
Q Consensus       240 ~~~~~i~~~~~~~~~~~d~vid~~g~~~~~~~~~~~l~~~G~~~~~g~~~~------~-~~~~~~~~~~~~~~i~~~~~~  312 (365)
                      ++.+.+++..   ++++|++||++|.. .+..++++++++|+++.+|....      . ...+...++.+++++.++...
T Consensus       202 ~~~~~~~~~~---~~~~d~vi~~~g~~-~~~~~~~~l~~~G~~v~~g~~~~~~~~~~~~~~~~~~~~~~~~~~i~g~~~~  277 (333)
T 1v3u_A          202 SLEEALKKAS---PDGYDCYFDNVGGE-FLNTVLSQMKDFGKIAICGAISVYNRMDQLPPGPSPESIIYKQLRIEGFIVY  277 (333)
T ss_dssp             CHHHHHHHHC---TTCEEEEEESSCHH-HHHHHHTTEEEEEEEEECCCCC-------CCBCCCHHHHHHTTCEEEECCGG
T ss_pred             HHHHHHHHHh---CCCCeEEEECCChH-HHHHHHHHHhcCCEEEEEeccccccCCCCCCCCcCHHHHhhcCceEEEEehh
Confidence            6666666543   35899999999974 78899999999999999986432      1 112445678899999997643


Q ss_pred             -------CCcHHHHHHHHHcCCCCCCCceEEEecCChhhHHHHHHHHhcCCCceEEEEeC
Q 017868          313 -------KNTWPLCLELLRSGKIDVKPLVTHRFGFSQKEVEEAFETSARGGTAIKVMFNL  365 (365)
Q Consensus       313 -------~~~~~~~~~~l~~g~~~~~~~~~~~~~~~~~~~~~a~~~~~~~~~~gk~vi~~  365 (365)
                             .+.++++++++++|++.  +....+++|  +++.+|++.+.+++..||+|+++
T Consensus       278 ~~~~~~~~~~~~~~~~l~~~g~l~--~~~~~~~~l--~~~~~A~~~~~~~~~~gKvvl~~  333 (333)
T 1v3u_A          278 RWQGDVREKALRDLMKWVLEGKIQ--YHEHVTKGF--ENMPAAFIEMLNGANLGKAVVTA  333 (333)
T ss_dssp             GCCTHHHHHHHHHHHHHHHTTSSC--CCEEEEECG--GGHHHHHHHHHTTCCSBEEEEEC
T ss_pred             hcchHHHHHHHHHHHHHHHCCCcc--CccccccCH--HHHHHHHHHHHcCCCCceEEEeC
Confidence                   24567899999999994  444455777  99999999999988899999975

>3slk_A Polyketide synthase extender module 2; rossmann fold, NADPH, oxidoreductase; HET: NDP; 3.00A {Saccharopolyspora spinosa}

Probab=100.00  E-value=1.4e-42  Score=346.56  Aligned_cols=291  Identities=19%  Similarity=0.273  Sum_probs=242.8

Q ss_pred             CCceEEEEecC--CCCCCCcEEEEEeeeeeCcccHhhhhccccCCccCCCCcccCccceEEEEEeCCCCCCCCCCCEEEE
Q 017868           26 VNTLKIQPFEL--PSLGPYDVLVRMKAVGICGSDVHYLKTLRCADFVVKEPMVIGHECAGVIEKVGSEVKTLVPGDRVAL  103 (365)
Q Consensus        26 ~~~l~~~~~~~--p~~~~~eVlI~v~~~~l~~~D~~~~~g~~~~~~~~~~p~~~G~e~~G~V~~vG~~v~~~~~Gd~V~~  103 (365)
                      .+.|++.+.|.  |+|+++||+|||.++|||++|+....|.+      ..|.++|||++|+|+++|++|++|++||||++
T Consensus       221 ~~~L~~~~~~~p~~~~~~~eVlV~V~a~gin~~D~~~~~G~~------~~~~~lG~E~aG~V~~vG~~V~~~~vGDrV~~  294 (795)
T 3slk_A          221 LDGLALVDEPTATAPLGDGEVRIAMRAAGVNFRDALIALGMY------PGVASLGSEGAGVVVETGPGVTGLAPGDRVMG  294 (795)
T ss_dssp             STTEEECCCHHHHSCCCSSEEEEEEEEEEECHHHHHHTTTCC------SSCCCSCCCEEEEEEEECSSCCSSCTTCEEEE
T ss_pred             ccceEEEeCCccCCCCCCCEEEEEEEEEccCHHHHHHHcCCC------CCCccccceeEEEEEEeCCCCCcCCCCCEEEE
Confidence            36888887774  57899999999999999999999888753      33567999999999999999999999999987


Q ss_pred             cCCcCCCCCccccCCCCCCCCCccccccCCCCcceeeEEeecCCceEECCCCCCcchhccch-hhHHHHHHH-HhcCCCC
Q 017868          104 EPGISCWRCDHCKGGRYNLCPEMKFFATPPVHGSLANQVVHPADLCFKLPDNVSLEEGAMCE-PLSVGLHAC-RRANIGP  181 (365)
Q Consensus       104 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~v~~~~~~~iP~~~~~~~a~~~~-~~~~a~~~~-~~~~~~~  181 (365)
                      +                             ..|+|+||+++++++++++|+++++++|+.++ .+.|||+++ +.+++++
T Consensus       295 ~-----------------------------~~G~~ae~~~v~~~~~~~iP~~ls~~~AA~l~~~~~Ta~~al~~~a~l~~  345 (795)
T 3slk_A          295 M-----------------------------IPKAFGPLAVADHRMVTRIPAGWSFARAASVPIVFLTAYYALVDLAGLRP  345 (795)
T ss_dssp             C-----------------------------CSSCSSSEEEEETTSEEECCTTCCHHHHHHHHHHHHHHHCCCCCCTCCCT
T ss_pred             E-----------------------------ecCCCcCEEEeehHHEEECCCCCCHHHHHhhhHHHHHHHHHHHHHhCCCC
Confidence            5                             34899999999999999999999999999997 688999987 5689999


Q ss_pred             CCEEEEEcC-CHHHHHHHHHHHHHCCCCeEEEEeCChhHHHHHHHcCCCEEEeCCCCcccHHHHHHHHHHHhCCCceEEE
Q 017868          182 ETNVLIMGA-GPIGLVTMLGAPRAFGAPRIVIVDVDDYRLSVAKEIGADNIVKVSTNLQDIAEEVEKIQKAMGTGIDVSF  260 (365)
Q Consensus       182 g~~vlI~G~-g~~G~~ai~~l~~~~g~~~vi~v~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~i~~~~~~~~~~~d~vi  260 (365)
                      |++|||+|+ |++|++++| +++..|++ |+++.+++ |.++++ +|+++++++  ...++.+.+++.+  .+.++|+||
T Consensus       346 G~~VLI~gaaGgvG~~aiq-lAk~~Ga~-V~~t~~~~-k~~~l~-lga~~v~~~--~~~~~~~~i~~~t--~g~GvDvVl  417 (795)
T 3slk_A          346 GESLLVHSAAGGVGMAAIQ-LARHLGAE-VYATASED-KWQAVE-LSREHLASS--RTCDFEQQFLGAT--GGRGVDVVL  417 (795)
T ss_dssp             TCCEEEESTTBHHHHHHHH-HHHHTTCC-EEEECCGG-GGGGSC-SCGGGEECS--SSSTHHHHHHHHS--CSSCCSEEE
T ss_pred             CCEEEEecCCCHHHHHHHH-HHHHcCCE-EEEEeChH-Hhhhhh-cChhheeec--CChhHHHHHHHHc--CCCCeEEEE
Confidence            999999986 999999999 99999995 67776555 666655 999988875  4468888887764  378999999


Q ss_pred             eCCCCHHHHHHHHHhcccCCEEEEEccCCCCccccchHhhhcCcEEEeeccc-------CCcHHHHHHHHHcCCCCCCCc
Q 017868          261 DCAGLNKTMSTALGATCAGGKVCLVGMGHHEMTVPLTPAAVREVDVVGVFRY-------KNTWPLCLELLRSGKIDVKPL  333 (365)
Q Consensus       261 d~~g~~~~~~~~~~~l~~~G~~~~~g~~~~~~~~~~~~~~~~~~~i~~~~~~-------~~~~~~~~~~l~~g~~~~~~~  333 (365)
                      |++|+. .+..++++|+++|+++.+|.......... ....+++++.+....       .+.++++++++++|.+  ++.
T Consensus       418 d~~gg~-~~~~~l~~l~~~Gr~v~iG~~~~~~~~~~-~~~~~~~~~~~~~l~~~~~~~~~~~l~~~~~l~~~g~l--~p~  493 (795)
T 3slk_A          418 NSLAGE-FADASLRMLPRGGRFLELGKTDVRDPVEV-ADAHPGVSYQAFDTVEAGPQRIGEMLHELVELFEGRVL--EPL  493 (795)
T ss_dssp             ECCCTT-TTHHHHTSCTTCEEEEECCSTTCCCHHHH-HHHSSSEEEEECCGGGGHHHHHHHHHHHHHHHHHTTSC--CCC
T ss_pred             ECCCcH-HHHHHHHHhcCCCEEEEeccccccCcccc-cccCCCCEEEEeeccccCHHHHHHHHHHHHHHHHcCCc--CCC
Confidence            999974 78999999999999999986443221111 122356666554321       3568899999999998  667


Q ss_pred             eEEEecCChhhHHHHHHHHhcCCCceEEEEeC
Q 017868          334 VTHRFGFSQKEVEEAFETSARGGTAIKVMFNL  365 (365)
Q Consensus       334 ~~~~~~~~~~~~~~a~~~~~~~~~~gk~vi~~  365 (365)
                      ++++|++  +++.+||+.++++++.||+||++
T Consensus       494 ~~~~~~l--~~~~eA~~~l~~g~~~GKvVl~~  523 (795)
T 3slk_A          494 PVTAWDV--RQAPEALRHLSQARHVGKLVLTM  523 (795)
T ss_dssp             CEEEEEG--GGHHHHHHHHHHTCCCBEEEEEC
T ss_pred             cceeEcH--HHHHHHHHHHhcCCccceEEEec
Confidence            8899999  99999999999999999999974

>2vz8_A Fatty acid synthase; transferase, phosphopantetheine, multienzyme, megasynthase, fatty acid synthesis; 3.2A {Sus scrofa} PDB: 2vz9_A*

Probab=99.97  E-value=3.8e-31  Score=289.57  Aligned_cols=290  Identities=19%  Similarity=0.234  Sum_probs=230.1

Q ss_pred             CceEEEEecCCC-C--CCCcEEEEEeeeeeCcccHhhhhccccCCc----cCCCCcccCccceEEEEEeCCCCCCCCCCC
Q 017868           27 NTLKIQPFELPS-L--GPYDVLVRMKAVGICGSDVHYLKTLRCADF----VVKEPMVIGHECAGVIEKVGSEVKTLVPGD   99 (365)
Q Consensus        27 ~~l~~~~~~~p~-~--~~~eVlI~v~~~~l~~~D~~~~~g~~~~~~----~~~~p~~~G~e~~G~V~~vG~~v~~~~~Gd   99 (365)
                      +.+.+.+.+... +  .++||+|||.++++|+.|+....|......    ....|.++|+|++|+|.          +||
T Consensus      1542 ~sl~~~~~~~~~~~~l~~~eVlVkV~aaglN~~Dv~~~~G~~~~~~~p~~~~~~~~~lG~E~aG~V~----------vGd 1611 (2512)
T 2vz8_A         1542 SSIRWVCSPLHYALPASCQDRLCSVYYTSLNFRDVMLATGKLSPDSIPGKWLTRDCMLGMEFSGRDA----------SGR 1611 (2512)
T ss_dssp             TSEEEEECTTTTCCCHHHHTTEEEEEEEECCHHHHHHHHTSSCGGGCCSCCSCSSSCCCCEEEEEET----------TSC
T ss_pred             CceEEEecCcccccCCCCCceEEEEEecccCHHHHHHHhCCCccccccccccccCCceEEEEEEEEc----------cCC
Confidence            467777666543 3  379999999999999999999988643211    12346789999999882          799


Q ss_pred             EEEEcCCcCCCCCccccCCCCCCCCCccccccCCCCcceeeEEeecCCceEECCCCCCcchhccch-hhHHHHHHH-Hhc
Q 017868          100 RVALEPGISCWRCDHCKGGRYNLCPEMKFFATPPVHGSLANQVVHPADLCFKLPDNVSLEEGAMCE-PLSVGLHAC-RRA  177 (365)
Q Consensus       100 ~V~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~v~~~~~~~iP~~~~~~~a~~~~-~~~~a~~~~-~~~  177 (365)
                      ||+++.                            ..|+|+||++++++.++++|+++++++|+.++ .+.|||+++ +.+
T Consensus      1612 rV~g~~----------------------------~~G~~Aeyv~vp~~~v~~iPd~ls~~eAA~lp~~~~TA~~al~~~a 1663 (2512)
T 2vz8_A         1612 RVMGMV----------------------------PAEGLATSVLLLQHATWEVPSTWTLEEAASVPIVYTTAYYSLVVRG 1663 (2512)
T ss_dssp             CEEEEC----------------------------SSCCSBSEEECCGGGEEECCTTSCHHHHTTSHHHHHHHHHHHTTTT
T ss_pred             EEEEee----------------------------cCCceeeEEEcccceEEEeCCCCCHHHHHHhHHHHHHHHHHHHHHh
Confidence            998862                            34899999999999999999999999999998 788999998 568


Q ss_pred             CCCCCCEEEEEcC-CHHHHHHHHHHHHHCCCCeEEEEeCChhHHHHHHH----cCCCEEEeCCCCcccHHHHHHHHHHHh
Q 017868          178 NIGPETNVLIMGA-GPIGLVTMLGAPRAFGAPRIVIVDVDDYRLSVAKE----IGADNIVKVSTNLQDIAEEVEKIQKAM  252 (365)
Q Consensus       178 ~~~~g~~vlI~G~-g~~G~~ai~~l~~~~g~~~vi~v~~~~~~~~~~~~----~g~~~~~~~~~~~~~~~~~i~~~~~~~  252 (365)
                      ++++|++|||+|+ |++|++++| +|+..|+ .|++++.+++|.+++++    +|+++++++.  +.++.+.+++.+  .
T Consensus      1664 ~l~~Ge~VLI~gaaGgVG~aAiq-lAk~~Ga-~Viat~~s~~k~~~l~~~~~~lga~~v~~~~--~~~~~~~i~~~t--~ 1737 (2512)
T 2vz8_A         1664 RMQPGESVLIHSGSGGVGQAAIA-IALSRGC-RVFTTVGSAEKRAYLQARFPQLDETCFANSR--DTSFEQHVLRHT--A 1737 (2512)
T ss_dssp             CCCTTCEEEETTTTSHHHHHHHH-HHHHTTC-EEEEEESCHHHHHHHHHHCTTCCSTTEEESS--SSHHHHHHHHTT--T
T ss_pred             cCCCCCEEEEEeCChHHHHHHHH-HHHHcCC-EEEEEeCChhhhHHHHhhcCCCCceEEecCC--CHHHHHHHHHhc--C
Confidence            8999999999976 999999999 9999999 67788888999998876    7888888753  467777776653  3


Q ss_pred             CCCceEEEeCCCCHHHHHHHHHhcccCCEEEEEccCCCC-ccccchHhhhcCcEEEeeccc------CCcHHHHHHHH--
Q 017868          253 GTGIDVSFDCAGLNKTMSTALGATCAGGKVCLVGMGHHE-MTVPLTPAAVREVDVVGVFRY------KNTWPLCLELL--  323 (365)
Q Consensus       253 ~~~~d~vid~~g~~~~~~~~~~~l~~~G~~~~~g~~~~~-~~~~~~~~~~~~~~i~~~~~~------~~~~~~~~~~l--  323 (365)
                      +.++|+|||+++ ...+..++++++++|+++.+|..... ..........+++++.+....      ...+.++++++  
T Consensus      1738 g~GvDvVld~~g-~~~l~~~l~~L~~~Gr~V~iG~~~~~~~~~~~~~~~~~~~~~~g~~l~~~~~~~~~~~~~~l~~l~~ 1816 (2512)
T 2vz8_A         1738 GKGVDLVLNSLA-EEKLQASVRCLAQHGRFLEIGKFDLSNNHALGMAVFLKNVTFHGILLDSLFEEGGATWQEVSELLKA 1816 (2512)
T ss_dssp             SCCEEEEEECCC-HHHHHHHHTTEEEEEEEEECCCHHHHTTCEEEGGGGGGCCEEEECCGGGTTSSCCHHHHHHHHHHHH
T ss_pred             CCCceEEEECCC-chHHHHHHHhcCCCcEEEEeecccccccCcccccccccCCcEEEeeHHHHhhhCHHHHHHHHHHHHH
Confidence            678999999998 56889999999999999999743211 111223456688888886532      23455555554  


Q ss_pred             --HcCCCCCCCceEEEecCChhhHHHHHHHHhcCCCceEEEEeC
Q 017868          324 --RSGKIDVKPLVTHRFGFSQKEVEEAFETSARGGTAIKVMFNL  365 (365)
Q Consensus       324 --~~g~~~~~~~~~~~~~~~~~~~~~a~~~~~~~~~~gk~vi~~  365 (365)
                        +++.+  .+.++++|++  +++.+|++.+.++++.||+|+++
T Consensus      1817 ~~~~g~l--~p~i~~~f~l--~ei~eA~~~l~~g~~~GKvVi~~ 1856 (2512)
T 2vz8_A         1817 GIQEGVV--QPLKCTVFPR--TKVEAAFRYMAQGKHIGKVVIQV 1856 (2512)
T ss_dssp             HHTTTCS--CCCCEEEEES--STHHHHHHHHHTTCCSSEEEEEC
T ss_pred             HHHcCCc--CCCcceEecH--HHHHHHHHhhhccCccceEEEEC
Confidence              45666  6778899999  99999999999999999999874

>1pqw_A Polyketide synthase; rossmann fold, dimer, structural genomics, PSI, protein STRU initiative; 2.66A {Mycobacterium tuberculosis} SCOP: c.2.1.1

Probab=99.83  E-value=6.8e-20  Score=153.67  Aligned_cols=176  Identities=21%  Similarity=0.352  Sum_probs=127.7

Q ss_pred             CceEECCCCCCcchhccch-hhHHHHHHHH-hcCCCCCCEEEEEcC-CHHHHHHHHHHHHHCCCCeEEEEeCChhHHHHH
Q 017868          147 DLCFKLPDNVSLEEGAMCE-PLSVGLHACR-RANIGPETNVLIMGA-GPIGLVTMLGAPRAFGAPRIVIVDVDDYRLSVA  223 (365)
Q Consensus       147 ~~~~~iP~~~~~~~a~~~~-~~~~a~~~~~-~~~~~~g~~vlI~G~-g~~G~~ai~~l~~~~g~~~vi~v~~~~~~~~~~  223 (365)
                      ++++++|+++++++|+.++ ++.|||+++. ..++++|++|||+|+ |++|+++++ +++..|+ +|+++++++++.+.+
T Consensus         2 ~~~~~~P~~~~~~~aa~~~~~~~ta~~~l~~~~~~~~g~~vlV~Ga~ggiG~~~~~-~~~~~G~-~V~~~~~~~~~~~~~   79 (198)
T 1pqw_A            2 DLVVPIPDTLADNEAATFGVAYLTAWHSLCEVGRLSPGERVLIHSATGGVGMAAVS-IAKMIGA-RIYTTAGSDAKREML   79 (198)
T ss_dssp             ------------CHHHHHHHHHHHHHHHHHTTSCCCTTCEEEETTTTSHHHHHHHH-HHHHHTC-EEEEEESSHHHHHHH
T ss_pred             CceeECCCCCCHHHHHHhhHHHHHHHHHHHHHhCCCCCCEEEEeeCCChHHHHHHH-HHHHcCC-EEEEEeCCHHHHHHH
Confidence            5688999999999999986 8999999995 578999999999985 999999999 7788899 688888999999889


Q ss_pred             HHcCCCEEEeCCCCcccHHHHHHHHHHHhCCCceEEEeCCCCHHHHHHHHHhcccCCEEEEEccCCC--CccccchHhhh
Q 017868          224 KEIGADNIVKVSTNLQDIAEEVEKIQKAMGTGIDVSFDCAGLNKTMSTALGATCAGGKVCLVGMGHH--EMTVPLTPAAV  301 (365)
Q Consensus       224 ~~~g~~~~~~~~~~~~~~~~~i~~~~~~~~~~~d~vid~~g~~~~~~~~~~~l~~~G~~~~~g~~~~--~~~~~~~~~~~  301 (365)
                      +++|++.++++..  .++.+.+.+...  +.++|++||++|. ..+..++++++++|+++.+|....  ...++.. ...
T Consensus        80 ~~~g~~~~~d~~~--~~~~~~~~~~~~--~~~~D~vi~~~g~-~~~~~~~~~l~~~G~~v~~g~~~~~~~~~~~~~-~~~  153 (198)
T 1pqw_A           80 SRLGVEYVGDSRS--VDFADEILELTD--GYGVDVVLNSLAG-EAIQRGVQILAPGGRFIELGKKDVYADASLGLA-ALA  153 (198)
T ss_dssp             HTTCCSEEEETTC--STHHHHHHHHTT--TCCEEEEEECCCT-HHHHHHHHTEEEEEEEEECSCGGGTTTCEEEGG-GGT
T ss_pred             HHcCCCEEeeCCc--HHHHHHHHHHhC--CCCCeEEEECCch-HHHHHHHHHhccCCEEEEEcCCCCcCcCcCChh-Hhc
Confidence            9999988776543  456555555432  4579999999985 588899999999999999986432  1122222 345


Q ss_pred             cCcEEEeecc------c----CCcHHHHHHHHHcCCCCC
Q 017868          302 REVDVVGVFR------Y----KNTWPLCLELLRSGKIDV  330 (365)
Q Consensus       302 ~~~~i~~~~~------~----~~~~~~~~~~l~~g~~~~  330 (365)
                      +++++.+...      .    .+.++++++++++|++.+
T Consensus       154 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~g~l~~  192 (198)
T 1pqw_A          154 KSASFSVVDLDLNLKLQPARYRQLLQHILQHVADGKLEV  192 (198)
T ss_dssp             TTCEEEECCHHHHHHHCHHHHHHHHHHHHHHHHTTSSCC
T ss_pred             CCcEEEEEehHHhhccCHHHHHHHHHHHHHHHHcCCccC
Confidence            7788775321      1    356889999999999954

>2yvl_A TRMI protein, hypothetical protein; tRNA, methyltransferase, S-adenosylmethionine, structural GE NPPSFA; HET: SAM; 2.20A {Aquifex aeolicus}

Probab=99.08  E-value=4.1e-10  Score=97.19  Aligned_cols=169  Identities=11%  Similarity=0.072  Sum_probs=109.0

Q ss_pred             CCCCCEEEEcC-------CcCCCCCccccCCCCCCCCCccccccCCCCcceeeEEeecCCceEECCCCCCcch------h
Q 017868           95 LVPGDRVALEP-------GISCWRCDHCKGGRYNLCPEMKFFATPPVHGSLANQVVHPADLCFKLPDNVSLEE------G  161 (365)
Q Consensus        95 ~~~Gd~V~~~~-------~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~v~~~~~~~iP~~~~~~~------a  161 (365)
                      +++||+|++.+       ...|++|.+|..|..+.|+..+     ...|...      +..+++.|+...+.+      +
T Consensus         4 ~~~Gd~V~~~~~~~~~~~~~~~g~~~~~~~G~~~~~~~~g-----~~~G~~~------~~~~~~~p~~~~~~~~~~~~~~   72 (248)
T 2yvl_A            4 FKEGEYVLIRFGEKKFLRKLLPKQSLSVKKSVLKFDEVIG-----KPEGVKI------NGFEVYRPTLEEIILLGFERKT   72 (248)
T ss_dssp             CCTTCEEEEEETTEEEEEECCTTCEEEETTEEEEGGGTTT-----CCTTEEE------TTEEEECCCHHHHHHHTSCCSS
T ss_pred             CCCCCEEEEEeCCeEEEEEEcCCCEEecCCceEEHHHhcC-----CCCCCEE------EEEEEeCCCHHHHHHhcCcCCC
Confidence            89999999987       6678888888887777776331     1123322      344445454322221      2


Q ss_pred             ccchhhHHHHHHHHhcCCCCCCEEEEEcCCHHHHHHHHHHHHHCCCCeEEEEeCChhHHHHHHHc----CC-CEEEeCCC
Q 017868          162 AMCEPLSVGLHACRRANIGPETNVLIMGAGPIGLVTMLGAPRAFGAPRIVIVDVDDYRLSVAKEI----GA-DNIVKVST  236 (365)
Q Consensus       162 ~~~~~~~~a~~~~~~~~~~~g~~vlI~G~g~~G~~ai~~l~~~~g~~~vi~v~~~~~~~~~~~~~----g~-~~~~~~~~  236 (365)
                      +.+.+.. +.+.+....+.++++||..|+| .|..++. +++. +. .+++++.+++..+.+++.    +. ..+.....
T Consensus        73 ~~~~~~~-~~~~~~~~~~~~~~~vldiG~G-~G~~~~~-l~~~-~~-~v~~vD~~~~~~~~a~~~~~~~~~~~~~~~~~~  147 (248)
T 2yvl_A           73 QIIYPKD-SFYIALKLNLNKEKRVLEFGTG-SGALLAV-LSEV-AG-EVWTFEAVEEFYKTAQKNLKKFNLGKNVKFFNV  147 (248)
T ss_dssp             CCCCHHH-HHHHHHHTTCCTTCEEEEECCT-TSHHHHH-HHHH-SS-EEEEECSCHHHHHHHHHHHHHTTCCTTEEEECS
T ss_pred             Ccccchh-HHHHHHhcCCCCCCEEEEeCCC-ccHHHHH-HHHh-CC-EEEEEecCHHHHHHHHHHHHHcCCCCcEEEEEc
Confidence            2222322 3355677788999999999988 5888888 7766 55 899999999888776553    43 22211111


Q ss_pred             CcccHHHHHHHHHHHhCCCceEEEeCCCCH-HHHHHHHHhcccCCEEEEEcc
Q 017868          237 NLQDIAEEVEKIQKAMGTGIDVSFDCAGLN-KTMSTALGATCAGGKVCLVGM  287 (365)
Q Consensus       237 ~~~~~~~~i~~~~~~~~~~~d~vid~~g~~-~~~~~~~~~l~~~G~~~~~g~  287 (365)
                      +..+.   .     ..+.++|+|+...+.+ ..+..+.+.|+++|.++....
T Consensus       148 d~~~~---~-----~~~~~~D~v~~~~~~~~~~l~~~~~~L~~gG~l~~~~~  191 (248)
T 2yvl_A          148 DFKDA---E-----VPEGIFHAAFVDVREPWHYLEKVHKSLMEGAPVGFLLP  191 (248)
T ss_dssp             CTTTS---C-----CCTTCBSEEEECSSCGGGGHHHHHHHBCTTCEEEEEES
T ss_pred             Chhhc---c-----cCCCcccEEEECCcCHHHHHHHHHHHcCCCCEEEEEeC
Confidence            11111   0     0135799999887765 678889999999999988743

>1gpj_A Glutamyl-tRNA reductase; tRNA-dependent tetrapyrrole biosynthesis; HET: GMC CIT; 1.95A {Methanopyrus kandleri} SCOP: a.151.1.1 c.2.1.7 d.58.39.1

Probab=98.90  E-value=9.2e-12  Score=115.21  Aligned_cols=181  Identities=15%  Similarity=0.217  Sum_probs=127.2

Q ss_pred             ccCccceEEEEEeCCCCCCCCCCCEEEEcCCcCCCCCccccCCCCCCCCCccccccCCCCcceeeEEeecCCceEECCCC
Q 017868           76 VIGHECAGVIEKVGSEVKTLVPGDRVALEPGISCWRCDHCKGGRYNLCPEMKFFATPPVHGSLANQVVHPADLCFKLPDN  155 (365)
Q Consensus        76 ~~G~e~~G~V~~vG~~v~~~~~Gd~V~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~v~~~~~~~iP~~  155 (365)
                      ..|++.++.|.++|.+++++.+|++++.-.-..                  .+.. ....|++++|+......++.+|++
T Consensus        76 ~~g~~a~~~i~~v~~Glds~~vGe~~Il~qvk~------------------~~~~-~~~~G~~~~~~~~~~~~a~~~~k~  136 (404)
T 1gpj_A           76 KRGSEAVRHLFRVASGLESMMVGEQEILRQVKK------------------AYDR-AARLGTLDEALKIVFRRAINLGKR  136 (404)
T ss_dssp             EEHHHHHHHHHHHHTTTTSSSTTCHHHHHHHHH------------------HHHH-HHHHTCCCHHHHHHHHHHHHHHHH
T ss_pred             ecCchHhhhheeeccCCCCCcCCcchhHHHHHH------------------HHHH-HHHcCCchHHHHHHHHHHhhhhcc
Confidence            578999999999999999999999873210000                  0000 012366788888888888999988


Q ss_pred             CCcchhccchhhHHHHHHHHhcC----CCCCCEEEEEcCCHHHHHHHHHHHHHCCCCeEEEEeCChhHH-HHHHHcCCCE
Q 017868          156 VSLEEGAMCEPLSVGLHACRRAN----IGPETNVLIMGAGPIGLVTMLGAPRAFGAPRIVIVDVDDYRL-SVAKEIGADN  230 (365)
Q Consensus       156 ~~~~~a~~~~~~~~a~~~~~~~~----~~~g~~vlI~G~g~~G~~ai~~l~~~~g~~~vi~v~~~~~~~-~~~~~~g~~~  230 (365)
                      ++.+.++...+..+++++++...    -.+|++|+|+|+|.+|.++++ .++..|++.|++++++.++. ++++++|+. 
T Consensus       137 v~~~~~~~~~~~s~a~~av~~a~~~~~~l~g~~VlIiGaG~iG~~~a~-~l~~~G~~~V~v~~r~~~ra~~la~~~g~~-  214 (404)
T 1gpj_A          137 AREETRISEGAVSIGSAAVELAERELGSLHDKTVLVVGAGEMGKTVAK-SLVDRGVRAVLVANRTYERAVELARDLGGE-  214 (404)
T ss_dssp             HHHHSSTTCSCCSHHHHHHHHHHHHHSCCTTCEEEEESCCHHHHHHHH-HHHHHCCSEEEEECSSHHHHHHHHHHHTCE-
T ss_pred             CcchhhhcCCCccHHHHHHHHHHHHhccccCCEEEEEChHHHHHHHHH-HHHHCCCCEEEEEeCCHHHHHHHHHHcCCc-
Confidence            88777766567778887764322    258999999999999999999 77788997899999998886 788889975 


Q ss_pred             EEeCCCCcccHHHHHHHHHHHhCCCceEEEeCCCCHHHHH--HHHHh--c--ccCCEEEEEccCC
Q 017868          231 IVKVSTNLQDIAEEVEKIQKAMGTGIDVSFDCAGLNKTMS--TALGA--T--CAGGKVCLVGMGH  289 (365)
Q Consensus       231 ~~~~~~~~~~~~~~i~~~~~~~~~~~d~vid~~g~~~~~~--~~~~~--l--~~~G~~~~~g~~~  289 (365)
                      ++.+    .++.+    ..    .++|+|++|++.+..+.  ..+..  +  ++++..+.++...
T Consensus       215 ~~~~----~~l~~----~l----~~aDvVi~at~~~~~~~~~~~l~~~~lk~r~~~~~v~vdia~  267 (404)
T 1gpj_A          215 AVRF----DELVD----HL----ARSDVVVSATAAPHPVIHVDDVREALRKRDRRSPILIIDIAN  267 (404)
T ss_dssp             ECCG----GGHHH----HH----HTCSEEEECCSSSSCCBCHHHHHHHHHHCSSCCCEEEEECCS
T ss_pred             eecH----HhHHH----Hh----cCCCEEEEccCCCCceecHHHHHHHHHhccCCCCEEEEEccC
Confidence            2222    23322    21    36999999998643221  34444  3  5567777776543

>1pjc_A Protein (L-alanine dehydrogenase); oxidoreductase, NAD; HET: NAD; 2.00A {Phormidium lapideum} SCOP: c.2.1.4 c.23.12.2 PDB: 1pjb_A* 1say_A

Probab=98.67  E-value=3.5e-08  Score=89.80  Aligned_cols=133  Identities=20%  Similarity=0.246  Sum_probs=93.2

Q ss_pred             CCEEEEEcCCHHHHHHHHHHHHHCCCCeEEEEeCChhHHHHHHHcCCCE--EEeCCCCcccHHHHHHHHHHHhCCCceEE
Q 017868          182 ETNVLIMGAGPIGLVTMLGAPRAFGAPRIVIVDVDDYRLSVAKEIGADN--IVKVSTNLQDIAEEVEKIQKAMGTGIDVS  259 (365)
Q Consensus       182 g~~vlI~G~g~~G~~ai~~l~~~~g~~~vi~v~~~~~~~~~~~~~g~~~--~~~~~~~~~~~~~~i~~~~~~~~~~~d~v  259 (365)
                      +++|+|+|+|++|+++++ +++.+|+ .|+++++++++.+.++++++..  +++.  ...++    .+..    .++|+|
T Consensus       167 ~~~VlViGaGgvG~~aa~-~a~~~Ga-~V~v~dr~~~r~~~~~~~~~~~~~~~~~--~~~~~----~~~~----~~~DvV  234 (361)
T 1pjc_A          167 PGKVVILGGGVVGTEAAK-MAVGLGA-QVQIFDINVERLSYLETLFGSRVELLYS--NSAEI----ETAV----AEADLL  234 (361)
T ss_dssp             CCEEEEECCSHHHHHHHH-HHHHTTC-EEEEEESCHHHHHHHHHHHGGGSEEEEC--CHHHH----HHHH----HTCSEE
T ss_pred             CCEEEEECCCHHHHHHHH-HHHhCCC-EEEEEeCCHHHHHHHHHhhCceeEeeeC--CHHHH----HHHH----cCCCEE
Confidence            489999999999999999 8889999 7999999999999888776543  2221  11222    2221    269999


Q ss_pred             EeCCCCHHH------HHHHHHhcccCCEEEEEccCCC-------CccccchHhhhcCcEEEeeccc-------------C
Q 017868          260 FDCAGLNKT------MSTALGATCAGGKVCLVGMGHH-------EMTVPLTPAAVREVDVVGVFRY-------------K  313 (365)
Q Consensus       260 id~~g~~~~------~~~~~~~l~~~G~~~~~g~~~~-------~~~~~~~~~~~~~~~i~~~~~~-------------~  313 (365)
                      |+|++.+..      ....+..++++|.++.++....       ...++...+..+++++.+....             +
T Consensus       235 I~~~~~~~~~~~~li~~~~~~~~~~g~~ivdv~~~~gg~~e~~~~~~~~~~~~~~~~v~~~~~~~lp~~~~~~~s~~~~~  314 (361)
T 1pjc_A          235 IGAVLVPGRRAPILVPASLVEQMRTGSVIVDVAVDQGGCVETLHPTSHTQPTYEVFGVVHYGVPNMPGAVPWTATQALNN  314 (361)
T ss_dssp             EECCCCTTSSCCCCBCHHHHTTSCTTCEEEETTCTTCCSBTTCCCCCSSSCEEEETTEEEECCSCGGGGCHHHHHHHHHH
T ss_pred             EECCCcCCCCCCeecCHHHHhhCCCCCEEEEEecCCCCCCccccCCCCCCCEEEECCEEEEEeCCcchhhHHHHHHHHHH
Confidence            999986532      4567889999999999875432       2233334455678887775432             2


Q ss_pred             CcHHHHHHHHHcC
Q 017868          314 NTWPLCLELLRSG  326 (365)
Q Consensus       314 ~~~~~~~~~l~~g  326 (365)
                      ..+..+++++++|
T Consensus       315 ~~~~~l~~l~~~G  327 (361)
T 1pjc_A          315 STLPYVVKLANQG  327 (361)
T ss_dssp             HHHHHHHHHHHHG
T ss_pred             HHHHHHHHHHhCC
Confidence            2346677777776

>1l7d_A Nicotinamide nucleotide transhydrogenase, subunit alpha 1; transhydrogenase domain I, oxidoreductase; 1.81A {Rhodospirillum rubrum} SCOP: c.2.1.4 c.23.12.2 PDB: 1hzz_A* 1f8g_A 1l7e_A* 1u28_A* 1u2d_A* 1u2g_A* 1xlt_A* 2oo5_A* 2oor_A* 2frd_A* 2fsv_A* 1nm5_A* 2fr8_A* 1ptj_A*

Probab=98.44  E-value=6.6e-07  Score=82.07  Aligned_cols=142  Identities=19%  Similarity=0.225  Sum_probs=97.1

Q ss_pred             CCCEEEEEcCCHHHHHHHHHHHHHCCCCeEEEEeCChhHHHHHHHcCCCEE-EeCCC-----C--------ccc----HH
Q 017868          181 PETNVLIMGAGPIGLVTMLGAPRAFGAPRIVIVDVDDYRLSVAKEIGADNI-VKVST-----N--------LQD----IA  242 (365)
Q Consensus       181 ~g~~vlI~G~g~~G~~ai~~l~~~~g~~~vi~v~~~~~~~~~~~~~g~~~~-~~~~~-----~--------~~~----~~  242 (365)
                      ++++|+|+|+|.+|+++++ +++.+|+ .|+++++++++.+.++++|+..+ ++..+     .        +++    ..
T Consensus       171 ~g~~V~ViGaG~iG~~aa~-~a~~~Ga-~V~~~d~~~~~~~~~~~~Ga~~~~i~~~~~~~~~~~~~~~~~~s~~~~~~~~  248 (384)
T 1l7d_A          171 PPARVLVFGVGVAGLQAIA-TAKRLGA-VVMATDVRAATKEQVESLGGKFITVDDEAMKTAETAGGYAKEMGEEFRKKQA  248 (384)
T ss_dssp             CCCEEEEECCSHHHHHHHH-HHHHTTC-EEEEECSCSTTHHHHHHTTCEECCC-----------------------CCHH
T ss_pred             CCCEEEEECCCHHHHHHHH-HHHHCCC-EEEEEeCCHHHHHHHHHcCCeEEeecccccccccccccchhhcCHHHHhhhH
Confidence            6899999999999999999 8899999 59999999999888888998653 11110     0        000    11


Q ss_pred             HHHHHHHHHhCCCceEEEeCC---CCHH--H-HHHHHHhcccCCEEEEEccCC-CCc--cccchHhhhcCcEEEeecccC
Q 017868          243 EEVEKIQKAMGTGIDVSFDCA---GLNK--T-MSTALGATCAGGKVCLVGMGH-HEM--TVPLTPAAVREVDVVGVFRYK  313 (365)
Q Consensus       243 ~~i~~~~~~~~~~~d~vid~~---g~~~--~-~~~~~~~l~~~G~~~~~g~~~-~~~--~~~~~~~~~~~~~i~~~~~~~  313 (365)
                      ..+.+.    -.++|+||+|+   |.+.  . ....++.+++++.++.++... ...  ..+...+..+++++.+.....
T Consensus       249 ~~l~~~----~~~aDvVi~~~~~pg~~~~~li~~~~l~~mk~g~vivdva~~~gg~~~~~~~~~~~~~~~v~i~g~~~~p  324 (384)
T 1l7d_A          249 EAVLKE----LVKTDIAITTALIPGKPAPVLITEEMVTKMKPGSVIIDLAVEAGGNCPLSEPGKIVVKHGVKIVGHTNVP  324 (384)
T ss_dssp             HHHHHH----HTTCSEEEECCCCTTSCCCCCSCHHHHTTSCTTCEEEETTGGGTCSSTTCCTTCEEEETTEEEECCSSGG
T ss_pred             HHHHHH----hCCCCEEEECCccCCCCCCeeeCHHHHhcCCCCCEEEEEecCCCCCeecccCCcEEEECCEEEEEeCCCc
Confidence            113222    24799999999   5321  2 256788999999999987432 221  223334566888999887663


Q ss_pred             -CcHHHHHHHHHcCCC
Q 017868          314 -NTWPLCLELLRSGKI  328 (365)
Q Consensus       314 -~~~~~~~~~l~~g~~  328 (365)
                       ....++.+++.++.+
T Consensus       325 ~~~~~~a~~l~~~~~~  340 (384)
T 1l7d_A          325 SRVAADASPLFAKNLL  340 (384)
T ss_dssp             GGGHHHHHHHHHHHHH
T ss_pred             chhHHHHHHHHHHhHH
Confidence             345668888888765

>2eez_A Alanine dehydrogenase; TTHA0216, structural genomic NPPSFA, national project on protein structural and function analyses; 2.71A {Thermus thermophilus}

Probab=98.39  E-value=3.4e-06  Score=76.94  Aligned_cols=135  Identities=21%  Similarity=0.288  Sum_probs=85.7

Q ss_pred             CCCEEEEEcCCHHHHHHHHHHHHHCCCCeEEEEeCChhHHHHHHH-cCCCEEEeCCCCcccHHHHHHHHHHHhCCCceEE
Q 017868          181 PETNVLIMGAGPIGLVTMLGAPRAFGAPRIVIVDVDDYRLSVAKE-IGADNIVKVSTNLQDIAEEVEKIQKAMGTGIDVS  259 (365)
Q Consensus       181 ~g~~vlI~G~g~~G~~ai~~l~~~~g~~~vi~v~~~~~~~~~~~~-~g~~~~~~~~~~~~~~~~~i~~~~~~~~~~~d~v  259 (365)
                      ++++|+|+|+|.+|+++++ .++.+|+ .|+++++++++.+.+++ +|.....+.. ...    .+.+..    .++|++
T Consensus       165 ~~~~V~ViGaG~iG~~~a~-~l~~~Ga-~V~~~d~~~~~~~~~~~~~g~~~~~~~~-~~~----~l~~~~----~~~DvV  233 (369)
T 2eez_A          165 APASVVILGGGTVGTNAAK-IALGMGA-QVTILDVNHKRLQYLDDVFGGRVITLTA-TEA----NIKKSV----QHADLL  233 (369)
T ss_dssp             CCCEEEEECCSHHHHHHHH-HHHHTTC-EEEEEESCHHHHHHHHHHTTTSEEEEEC-CHH----HHHHHH----HHCSEE
T ss_pred             CCCEEEEECCCHHHHHHHH-HHHhCCC-EEEEEECCHHHHHHHHHhcCceEEEecC-CHH----HHHHHH----hCCCEE
Confidence            4689999999999999999 8889999 78999999988887765 7776322221 112    233322    268999


Q ss_pred             EeCCCCHHH------HHHHHHhcccCCEEEEEccCCC-------CccccchHhhhcCcEEEeeccc-------------C
Q 017868          260 FDCAGLNKT------MSTALGATCAGGKVCLVGMGHH-------EMTVPLTPAAVREVDVVGVFRY-------------K  313 (365)
Q Consensus       260 id~~g~~~~------~~~~~~~l~~~G~~~~~g~~~~-------~~~~~~~~~~~~~~~i~~~~~~-------------~  313 (365)
                      |+|++.+..      ....++.++++|.++.++....       +..++...+..+++++.+....             .
T Consensus       234 i~~~g~~~~~~~~li~~~~l~~mk~gg~iV~v~~~~gg~~d~~ep~~~~~~~~~~~~v~~~~v~~lp~~~p~~as~~~~~  313 (369)
T 2eez_A          234 IGAVLVPGAKAPKLVTRDMLSLMKEGAVIVDVAVDQGGCVETIRPTTHAEPTYVVDGVVHYGVANMPGAVPRTSTFALTN  313 (369)
T ss_dssp             EECCC-------CCSCHHHHTTSCTTCEEEECC-------------------CEETTEEEECCSCSGGGSHHHHHHHHHH
T ss_pred             EECCCCCccccchhHHHHHHHhhcCCCEEEEEecCCCCCCCcccCCCCCCCEEEECCEEEEeeCCcchhcHHHHHHHHHH
Confidence            999996532      4577889999999998875432       1122222344567777765432             2


Q ss_pred             CcHHHHHHHHHcC
Q 017868          314 NTWPLCLELLRSG  326 (365)
Q Consensus       314 ~~~~~~~~~l~~g  326 (365)
                      ..+..+++++.+|
T Consensus       314 ~~~~~l~~l~~~g  326 (369)
T 2eez_A          314 QTLPYVLKLAEKG  326 (369)
T ss_dssp             HHHHHHHHHHHHT
T ss_pred             HHHHHHHHHHhcC
Confidence            2345666777665

>2vhw_A Alanine dehydrogenase; NAD, secreted, oxidoreductase; HET: NAI; 2.0A {Mycobacterium tuberculosis} PDB: 2vhx_A* 2vhy_A 2vhz_A* 2vhv_A* 2voe_A 2voj_A*

Probab=98.38  E-value=1.7e-06  Score=79.07  Aligned_cols=120  Identities=14%  Similarity=0.187  Sum_probs=83.6

Q ss_pred             CCCEEEEEcCCHHHHHHHHHHHHHCCCCeEEEEeCChhHHHHHHH-cCCCEEEeCCCCcccHHHHHHHHHHHhCCCceEE
Q 017868          181 PETNVLIMGAGPIGLVTMLGAPRAFGAPRIVIVDVDDYRLSVAKE-IGADNIVKVSTNLQDIAEEVEKIQKAMGTGIDVS  259 (365)
Q Consensus       181 ~g~~vlI~G~g~~G~~ai~~l~~~~g~~~vi~v~~~~~~~~~~~~-~g~~~~~~~~~~~~~~~~~i~~~~~~~~~~~d~v  259 (365)
                      ++++|+|+|+|.+|+++++ .++.+|+ .|+++++++++.+.+++ +|+....++. ...+    +.+..    .++|+|
T Consensus       167 ~g~~V~ViG~G~iG~~~a~-~a~~~Ga-~V~~~d~~~~~l~~~~~~~g~~~~~~~~-~~~~----l~~~l----~~aDvV  235 (377)
T 2vhw_A          167 EPADVVVIGAGTAGYNAAR-IANGMGA-TVTVLDINIDKLRQLDAEFCGRIHTRYS-SAYE----LEGAV----KRADLV  235 (377)
T ss_dssp             CCCEEEEECCSHHHHHHHH-HHHHTTC-EEEEEESCHHHHHHHHHHTTTSSEEEEC-CHHH----HHHHH----HHCSEE
T ss_pred             CCCEEEEECCCHHHHHHHH-HHHhCCC-EEEEEeCCHHHHHHHHHhcCCeeEeccC-CHHH----HHHHH----cCCCEE
Confidence            5789999999999999999 8889999 78999999999887766 7775322221 1122    22222    268999


Q ss_pred             EeCCCCHHH------HHHHHHhcccCCEEEEEccCC-------CCccccchHhhhcCcEEEeecc
Q 017868          260 FDCAGLNKT------MSTALGATCAGGKVCLVGMGH-------HEMTVPLTPAAVREVDVVGVFR  311 (365)
Q Consensus       260 id~~g~~~~------~~~~~~~l~~~G~~~~~g~~~-------~~~~~~~~~~~~~~~~i~~~~~  311 (365)
                      ++|++.+..      ....++.+++++.++.++...       .+.+++...+..+++.+.+...
T Consensus       236 i~~~~~p~~~t~~li~~~~l~~mk~g~~iV~va~~~Ggv~e~~ep~~~~~~~~~~~~v~i~~~ph  300 (377)
T 2vhw_A          236 IGAVLVPGAKAPKLVSNSLVAHMKPGAVLVDIAIDQGGCFEGSRPTTYDHPTFAVHDTLFYCVAN  300 (377)
T ss_dssp             EECCCCTTSCCCCCBCHHHHTTSCTTCEEEEGGGGTTCSBTTCCCBCSSSCEEEETTEEEECBTT
T ss_pred             EECCCcCCCCCcceecHHHHhcCCCCcEEEEEecCCCCccccccCCCCCCCEEEECCEEEEecCC
Confidence            999986533      467888999999999987432       1222233334556777665543

>1x13_A NAD(P) transhydrogenase subunit alpha; NAD(H)-binding domain, rossmann fold, oxidoreductase; 1.90A {Escherichia coli} PDB: 1x14_A* 1x15_A* 2bru_A*

Probab=98.37  E-value=1.3e-06  Score=80.40  Aligned_cols=141  Identities=16%  Similarity=0.202  Sum_probs=93.1

Q ss_pred             CCCEEEEEcCCHHHHHHHHHHHHHCCCCeEEEEeCChhHHHHHHHcCCCEEEeCCCC-------------cccH----HH
Q 017868          181 PETNVLIMGAGPIGLVTMLGAPRAFGAPRIVIVDVDDYRLSVAKEIGADNIVKVSTN-------------LQDI----AE  243 (365)
Q Consensus       181 ~g~~vlI~G~g~~G~~ai~~l~~~~g~~~vi~v~~~~~~~~~~~~~g~~~~~~~~~~-------------~~~~----~~  243 (365)
                      ++++|+|+|+|.+|+++++ +++.+|+ .|+++++++++.+.++++|+..+. ++..             +.++    .+
T Consensus       171 ~g~~V~ViGaG~iG~~aa~-~a~~~Ga-~V~v~D~~~~~~~~~~~lGa~~~~-~~~~~~~~~~~g~~~~~~~~~~~~~~~  247 (401)
T 1x13_A          171 PPAKVMVIGAGVAGLAAIG-AANSLGA-IVRAFDTRPEVKEQVQSMGAEFLE-LDFKEEAGSGDGYAKVMSDAFIKAEME  247 (401)
T ss_dssp             CCCEEEEECCSHHHHHHHH-HHHHTTC-EEEEECSCGGGHHHHHHTTCEECC-C--------CCHHHHHHSHHHHHHHHH
T ss_pred             CCCEEEEECCCHHHHHHHH-HHHHCCC-EEEEEcCCHHHHHHHHHcCCEEEE-ecccccccccccchhhccHHHHHHHHH
Confidence            5889999999999999999 8899999 799999999998888999986431 1110             0111    11


Q ss_pred             HHHHHHHHhCCCceEEEeCCCCH-----HHH-HHHHHhcccCCEEEEEccC-CCCcccc--ch-HhhhcCcEEEeecccC
Q 017868          244 EVEKIQKAMGTGIDVSFDCAGLN-----KTM-STALGATCAGGKVCLVGMG-HHEMTVP--LT-PAAVREVDVVGVFRYK  313 (365)
Q Consensus       244 ~i~~~~~~~~~~~d~vid~~g~~-----~~~-~~~~~~l~~~G~~~~~g~~-~~~~~~~--~~-~~~~~~~~i~~~~~~~  313 (365)
                      .+.+..    .++|+||++++.+     ..+ ...++.+++++.++.++.. +......  .. .+..+++++.+.....
T Consensus       248 ~l~e~~----~~aDvVI~~~~~pg~~ap~li~~~~l~~mk~g~vIVdva~~~Gg~v~~~~~~~p~~~~~gv~i~g~~~~p  323 (401)
T 1x13_A          248 LFAAQA----KEVDIIVTTALIPGKPAPKLITREMVDSMKAGSVIVDLAAQNGGNCEYTVPGEIFTTENGVKVIGYTDLP  323 (401)
T ss_dssp             HHHHHH----HHCSEEEECCCCTTSCCCCCBCHHHHHTSCTTCEEEETTGGGTCSBTTCCTTSEEECTTSCEEECCSCTG
T ss_pred             HHHHHh----CCCCEEEECCccCCCCCCeeeCHHHHhcCCCCcEEEEEcCCCCCCcCcccCCCceEEECCEEEEeeCCCc
Confidence            233322    3699999996332     122 4688899999999999853 2222222  12 1556889999876653


Q ss_pred             CcH-HHHHHHHHcCCC
Q 017868          314 NTW-PLCLELLRSGKI  328 (365)
Q Consensus       314 ~~~-~~~~~~l~~g~~  328 (365)
                      ..+ +++.+++.++.+
T Consensus       324 ~~~~~~a~~ll~~~~~  339 (401)
T 1x13_A          324 GRLPTQSSQLYGTNLV  339 (401)
T ss_dssp             GGSHHHHHHHHHHHHH
T ss_pred             ccCHHHHHHHHHHhHH
Confidence            333 346666555433

>3ce6_A Adenosylhomocysteinase; protein-substrate complex, dimer of dimers, NAD binding DOMA amino acid insertional region, hydrolase; HET: ADN NAD; 1.60A {Mycobacterium tuberculosis} PDB: 3dhy_A* 2zj0_A* 2ziz_A* 2zj1_A*

Probab=98.26  E-value=2.5e-06  Score=80.01  Aligned_cols=105  Identities=20%  Similarity=0.204  Sum_probs=82.2

Q ss_pred             hHHHHHHHHhc--CCCCCCEEEEEcCCHHHHHHHHHHHHHCCCCeEEEEeCChhHHHHHHHcCCCEEEeCCCCcccHHHH
Q 017868          167 LSVGLHACRRA--NIGPETNVLIMGAGPIGLVTMLGAPRAFGAPRIVIVDVDDYRLSVAKEIGADNIVKVSTNLQDIAEE  244 (365)
Q Consensus       167 ~~~a~~~~~~~--~~~~g~~vlI~G~g~~G~~ai~~l~~~~g~~~vi~v~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~  244 (365)
                      ..++++++++.  ...+|++|+|.|.|.+|..+++ .++.+|+ +|+++++++++.+.++++|++ +.       ++.+ 
T Consensus       257 ~~s~~~g~~r~~~~~l~GktV~IiG~G~IG~~~A~-~lka~Ga-~Viv~d~~~~~~~~A~~~Ga~-~~-------~l~e-  325 (494)
T 3ce6_A          257 RHSLIDGINRGTDALIGGKKVLICGYGDVGKGCAE-AMKGQGA-RVSVTEIDPINALQAMMEGFD-VV-------TVEE-  325 (494)
T ss_dssp             HHHHHHHHHHHHCCCCTTCEEEEECCSHHHHHHHH-HHHHTTC-EEEEECSCHHHHHHHHHTTCE-EC-------CHHH-
T ss_pred             hhhhhHHHHhccCCCCCcCEEEEEccCHHHHHHHH-HHHHCCC-EEEEEeCCHHHHHHHHHcCCE-Ee-------cHHH-
Confidence            34456666443  3789999999999999999999 8889999 799999999998888899985 21       1211 


Q ss_pred             HHHHHHHhCCCceEEEeCCCCHHHHH-HHHHhcccCCEEEEEccCC
Q 017868          245 VEKIQKAMGTGIDVSFDCAGLNKTMS-TALGATCAGGKVCLVGMGH  289 (365)
Q Consensus       245 i~~~~~~~~~~~d~vid~~g~~~~~~-~~~~~l~~~G~~~~~g~~~  289 (365)
                         .    -.++|+|+++++....+. ..++.+++++.++.+|...
T Consensus       326 ---~----l~~aDvVi~atgt~~~i~~~~l~~mk~ggilvnvG~~~  364 (494)
T 3ce6_A          326 ---A----IGDADIVVTATGNKDIIMLEHIKAMKDHAILGNIGHFD  364 (494)
T ss_dssp             ---H----GGGCSEEEECSSSSCSBCHHHHHHSCTTCEEEECSSSG
T ss_pred             ---H----HhCCCEEEECCCCHHHHHHHHHHhcCCCcEEEEeCCCC
Confidence               1    147999999999765555 7888999999999987643

>1o54_A SAM-dependent O-methyltransferase; TM0748, structural genomi PSI, protein structure initiative, joint center for structu genomics; 1.65A {Thermotoga maritima} SCOP: c.66.1.13

Probab=98.12  E-value=7.7e-06  Score=71.47  Aligned_cols=188  Identities=15%  Similarity=0.099  Sum_probs=103.5

Q ss_pred             eCCCCCCCCCCCEEEEcCCcCCCCCccccCCCCCCCCCccccccCCCCcceeeEEeecCC--ceEECCCCCCcchhcc--
Q 017868           88 VGSEVKTLVPGDRVALEPGISCWRCDHCKGGRYNLCPEMKFFATPPVHGSLANQVVHPAD--LCFKLPDNVSLEEGAM--  163 (365)
Q Consensus        88 vG~~v~~~~~Gd~V~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~v~~~--~~~~iP~~~~~~~a~~--  163 (365)
                      +|+....+++||+|+.+....+..+..+..+...-+....+-...-....+.+.+.++..  .+..-|+...+.++..  
T Consensus        13 ~~~~~~~~~~gd~v~i~~~~~~~~~~~~~~~~~~~~~~g~~~~~~i~g~~~g~~~~~~~~~~~~~~~p~~~~~~~~~~~~   92 (277)
T 1o54_A           13 VGKVADTLKPGDRVLLSFEDESEFLVDLEKDKKLHTHLGIIDLNEVFEKGPGEIIRTSAGKKGYILIPSLIDEIMNMKRR   92 (277)
T ss_dssp             CCCGGGCCCTTCEEEEEETTSCEEEEECCTTCEEEETTEEEEHHHHTTSCTTCEEECTTCCEEEEECCCHHHHHHTCCC-
T ss_pred             cccccCCCCCCCEEEEEECCCcEEEEEEcCCCEEecCCceEEHHHhcCCCCCcEEEEcCCcEEEEeCCCHHHHHhhcccc
Confidence            566667799999999975444333323333321111110000000001123344555543  3344444322222211  


Q ss_pred             --chhhHHHHHHHHhcCCCCCCEEEEEcCCHHHHHHHHHHHHHCC-CCeEEEEeCChhHHHHHHH----cCC-CEEEeCC
Q 017868          164 --CEPLSVGLHACRRANIGPETNVLIMGAGPIGLVTMLGAPRAFG-APRIVIVDVDDYRLSVAKE----IGA-DNIVKVS  235 (365)
Q Consensus       164 --~~~~~~a~~~~~~~~~~~g~~vlI~G~g~~G~~ai~~l~~~~g-~~~vi~v~~~~~~~~~~~~----~g~-~~~~~~~  235 (365)
                        ......+...+....+.++++||-.|+|. |..++. +++..+ ...+++++.+++..+.+++    .+. ..+....
T Consensus        93 ~~~~~~~~~~~i~~~~~~~~~~~VLDiG~G~-G~~~~~-la~~~~~~~~v~~vD~s~~~~~~a~~~~~~~~~~~~v~~~~  170 (277)
T 1o54_A           93 TQIVYPKDSSFIAMMLDVKEGDRIIDTGVGS-GAMCAV-LARAVGSSGKVFAYEKREEFAKLAESNLTKWGLIERVTIKV  170 (277)
T ss_dssp             CCCCCHHHHHHHHHHTTCCTTCEEEEECCTT-SHHHHH-HHHHTTTTCEEEEECCCHHHHHHHHHHHHHTTCGGGEEEEC
T ss_pred             CCccCHHHHHHHHHHhCCCCCCEEEEECCcC-CHHHHH-HHHHhCCCcEEEEEECCHHHHHHHHHHHHHcCCCCCEEEEE
Confidence              00111222334667889999999999876 777777 777754 3489999999988776654    354 2222211


Q ss_pred             CCcccHHHHHHHHHHHhCCCceEEEeCCCCH-HHHHHHHHhcccCCEEEEEc
Q 017868          236 TNLQDIAEEVEKIQKAMGTGIDVSFDCAGLN-KTMSTALGATCAGGKVCLVG  286 (365)
Q Consensus       236 ~~~~~~~~~i~~~~~~~~~~~d~vid~~g~~-~~~~~~~~~l~~~G~~~~~g  286 (365)
                      .   ++.+.+      ....+|+|+.....+ ..+..+.+.|+++|.++...
T Consensus       171 ~---d~~~~~------~~~~~D~V~~~~~~~~~~l~~~~~~L~pgG~l~~~~  213 (277)
T 1o54_A          171 R---DISEGF------DEKDVDALFLDVPDPWNYIDKCWEALKGGGRFATVC  213 (277)
T ss_dssp             C---CGGGCC------SCCSEEEEEECCSCGGGTHHHHHHHEEEEEEEEEEE
T ss_pred             C---CHHHcc------cCCccCEEEECCcCHHHHHHHHHHHcCCCCEEEEEe
Confidence            2   211111      135799999766544 57778899999999998874

>3oj0_A Glutr, glutamyl-tRNA reductase; structural genomics, PSI-2, protein structure initiative, MI center for structural genomics, MCSG; HET: MSE SO4; 1.65A {Thermoplasma volcanium}

Probab=98.08  E-value=1.8e-06  Score=67.55  Aligned_cols=107  Identities=10%  Similarity=0.069  Sum_probs=73.7

Q ss_pred             hhHHHHHHHHhcCCCCCCEEEEEcCCHHHHHHHHHHHHHCCCCeEEEEeCChhHHH-HHHHcCCCEEEeCCCCcccHHHH
Q 017868          166 PLSVGLHACRRANIGPETNVLIMGAGPIGLVTMLGAPRAFGAPRIVIVDVDDYRLS-VAKEIGADNIVKVSTNLQDIAEE  244 (365)
Q Consensus       166 ~~~~a~~~~~~~~~~~g~~vlI~G~g~~G~~ai~~l~~~~g~~~vi~v~~~~~~~~-~~~~~g~~~~~~~~~~~~~~~~~  244 (365)
                      ++++++++++......+.+|+|.|+|.+|.++++ .+...|++ +.+.++++++.+ ++++++.... .+    .++.+.
T Consensus         5 ~~sv~~~a~~~~~~~~~~~v~iiG~G~iG~~~a~-~l~~~g~~-v~v~~r~~~~~~~~a~~~~~~~~-~~----~~~~~~   77 (144)
T 3oj0_A            5 KVSIPSIVYDIVRKNGGNKILLVGNGMLASEIAP-YFSYPQYK-VTVAGRNIDHVRAFAEKYEYEYV-LI----NDIDSL   77 (144)
T ss_dssp             CCSHHHHHHHHHHHHCCCEEEEECCSHHHHHHGG-GCCTTTCE-EEEEESCHHHHHHHHHHHTCEEE-EC----SCHHHH
T ss_pred             cccHHHHHHHHHHhccCCEEEEECCCHHHHHHHH-HHHhCCCE-EEEEcCCHHHHHHHHHHhCCceE-ee----cCHHHH
Confidence            4566777776554455899999999999999999 55668986 888888888765 5677885432 22    233222


Q ss_pred             HHHHHHHhCCCceEEEeCCCCHHHHHHHHHhcccCCEEEEEccC
Q 017868          245 VEKIQKAMGTGIDVSFDCAGLNKTMSTALGATCAGGKVCLVGMG  288 (365)
Q Consensus       245 i~~~~~~~~~~~d~vid~~g~~~~~~~~~~~l~~~G~~~~~g~~  288 (365)
                      +        .++|+|+.|++..... .....+.++..++.++.+
T Consensus        78 ~--------~~~Divi~at~~~~~~-~~~~~l~~g~~vid~~~p  112 (144)
T 3oj0_A           78 I--------KNNDVIITATSSKTPI-VEERSLMPGKLFIDLGNP  112 (144)
T ss_dssp             H--------HTCSEEEECSCCSSCS-BCGGGCCTTCEEEECCSS
T ss_pred             h--------cCCCEEEEeCCCCCcE-eeHHHcCCCCEEEEccCC
Confidence            2        3689999999865221 122567778888777653

>4dio_A NAD(P) transhydrogenase subunit alpha PART 1; structural genomics, PSI-biology, NEW YORK structural genomi research consortium, nysgrc; 2.60A {Sinorhizobium meliloti}

Probab=97.96  E-value=4e-05  Score=69.72  Aligned_cols=140  Identities=19%  Similarity=0.194  Sum_probs=89.5

Q ss_pred             CCCEEEEEcCCHHHHHHHHHHHHHCCCCeEEEEeCChhHHHHHHHcCCCEEEeCCC------CcccHH------------
Q 017868          181 PETNVLIMGAGPIGLVTMLGAPRAFGAPRIVIVDVDDYRLSVAKEIGADNIVKVST------NLQDIA------------  242 (365)
Q Consensus       181 ~g~~vlI~G~g~~G~~ai~~l~~~~g~~~vi~v~~~~~~~~~~~~~g~~~~~~~~~------~~~~~~------------  242 (365)
                      ++.+|+|+|+|.+|+.+++ +++.+|+ .|++.+.++++.+.++++|+..+.....      ....+.            
T Consensus       189 ~~~kV~ViG~G~iG~~aa~-~a~~lGa-~V~v~D~~~~~l~~~~~~G~~~~~~~~~~~~d~~~~~~ya~e~s~~~~~~~~  266 (405)
T 4dio_A          189 PAAKIFVMGAGVAGLQAIA-TARRLGA-VVSATDVRPAAKEQVASLGAKFIAVEDEEFKAAETAGGYAKEMSGEYQVKQA  266 (405)
T ss_dssp             CCCEEEEECCSHHHHHHHH-HHHHTTC-EEEEECSSTTHHHHHHHTTCEECCCCC-----------------CHHHHHHH
T ss_pred             CCCEEEEECCcHHHHHHHH-HHHHCCC-EEEEEcCCHHHHHHHHHcCCceeecccccccccccccchhhhcchhhhhhhH
Confidence            6789999999999999999 8899999 6899999999999999998763221000      000111            


Q ss_pred             HHHHHHHHHhCCCceEEEeCCCCHH------HHHHHHHhcccCCEEEEEccC-CCCccc--cchHhhhcCcEEEeeccc-
Q 017868          243 EEVEKIQKAMGTGIDVSFDCAGLNK------TMSTALGATCAGGKVCLVGMG-HHEMTV--PLTPAAVREVDVVGVFRY-  312 (365)
Q Consensus       243 ~~i~~~~~~~~~~~d~vid~~g~~~------~~~~~~~~l~~~G~~~~~g~~-~~~~~~--~~~~~~~~~~~i~~~~~~-  312 (365)
                      ..+.+.    -.++|+||.++..+.      .....++.+++++.++.++.. +.....  +...+..+++++.+..+. 
T Consensus       267 ~~l~e~----l~~aDVVI~tvlipg~~ap~Lvt~emv~~Mk~GsVIVDvA~d~GG~~e~t~~~~~~~~~GV~~~gv~nlP  342 (405)
T 4dio_A          267 ALVAEH----IAKQDIVITTALIPGRPAPRLVTREMLDSMKPGSVVVDLAVERGGNIEGAEAGKVTEVGGVRIVGHLNVA  342 (405)
T ss_dssp             HHHHHH----HHTCSEEEECCCCSSSCCCCCBCHHHHTTSCTTCEEEETTGGGTCSBTTCCTTEEEEETTEEEEECSSGG
T ss_pred             hHHHHH----hcCCCEEEECCcCCCCCCCEEecHHHHhcCCCCCEEEEEeCCCCCCccccCCCCeEEECCEEEEEeCCCC
Confidence            122222    247999999864221      234788899999999998632 222211  112234567888887665 


Q ss_pred             CCcHHHHHHHHHcC
Q 017868          313 KNTWPLCLELLRSG  326 (365)
Q Consensus       313 ~~~~~~~~~~l~~g  326 (365)
                      ....+++.+++.++
T Consensus       343 ~~vp~tAS~~ls~~  356 (405)
T 4dio_A          343 GRIAASASLLYAKN  356 (405)
T ss_dssp             GGGHHHHHHHHHHH
T ss_pred             ccCHHHHHHHHHHH
Confidence            23345555554443

>3fpf_A Mtnas, putative uncharacterized protein; thermonicotianamine, nicotianamine, biosynthetic protein; HET: TNA MTA; 1.66A {Methanothermobacter thermautotrophicusorganism_taxid} PDB: 3fpe_A* 3fph_A* 3fpg_A* 3fpj_A* 3o31_A*

Probab=97.84  E-value=0.00011  Score=64.13  Aligned_cols=99  Identities=15%  Similarity=0.288  Sum_probs=71.6

Q ss_pred             hcCCCCCCEEEEEcCCHHHHHHHHHHHHHCCCCeEEEEeCChhHHHHHHHc----CCCEEEeCCCCcccHHHHHHHHHHH
Q 017868          176 RANIGPETNVLIMGAGPIGLVTMLGAPRAFGAPRIVIVDVDDYRLSVAKEI----GADNIVKVSTNLQDIAEEVEKIQKA  251 (365)
Q Consensus       176 ~~~~~~g~~vlI~G~g~~G~~ai~~l~~~~g~~~vi~v~~~~~~~~~~~~~----g~~~~~~~~~~~~~~~~~i~~~~~~  251 (365)
                      .++++++++||..|+|+.+..++. +++..|+ .|++++.+++..+.+++.    |.+.+.....+..++          
T Consensus       117 la~l~~g~rVLDIGcG~G~~ta~~-lA~~~ga-~V~gIDis~~~l~~Ar~~~~~~gl~~v~~v~gDa~~l----------  184 (298)
T 3fpf_A          117 LGRFRRGERAVFIGGGPLPLTGIL-LSHVYGM-RVNVVEIEPDIAELSRKVIEGLGVDGVNVITGDETVI----------  184 (298)
T ss_dssp             HTTCCTTCEEEEECCCSSCHHHHH-HHHTTCC-EEEEEESSHHHHHHHHHHHHHHTCCSEEEEESCGGGG----------
T ss_pred             HcCCCCcCEEEEECCCccHHHHHH-HHHccCC-EEEEEECCHHHHHHHHHHHHhcCCCCeEEEECchhhC----------
Confidence            478899999999999876666666 7777788 799999999888776553    553222222222221          


Q ss_pred             hCCCceEEEeCCCCH---HHHHHHHHhcccCCEEEEEc
Q 017868          252 MGTGIDVSFDCAGLN---KTMSTALGATCAGGKVCLVG  286 (365)
Q Consensus       252 ~~~~~d~vid~~g~~---~~~~~~~~~l~~~G~~~~~g  286 (365)
                      ....||+|+.+...+   ..+..+.+.|+++|+++...
T Consensus       185 ~d~~FDvV~~~a~~~d~~~~l~el~r~LkPGG~Lvv~~  222 (298)
T 3fpf_A          185 DGLEFDVLMVAALAEPKRRVFRNIHRYVDTETRIIYRT  222 (298)
T ss_dssp             GGCCCSEEEECTTCSCHHHHHHHHHHHCCTTCEEEEEE
T ss_pred             CCCCcCEEEECCCccCHHHHHHHHHHHcCCCcEEEEEc
Confidence            146899999765432   57788999999999999765

>3p2y_A Alanine dehydrogenase/pyridine nucleotide transhy; seattle structural genomics center for infectious disease, S tuberculosis; 1.82A {Mycobacterium smegmatis str}

Probab=97.82  E-value=0.00013  Score=65.77  Aligned_cols=128  Identities=17%  Similarity=0.202  Sum_probs=82.4

Q ss_pred             CCCEEEEEcCCHHHHHHHHHHHHHCCCCeEEEEeCChhHHHHHHHcCCCEEEeCCC---CcccHH---------HHHHHH
Q 017868          181 PETNVLIMGAGPIGLVTMLGAPRAFGAPRIVIVDVDDYRLSVAKEIGADNIVKVST---NLQDIA---------EEVEKI  248 (365)
Q Consensus       181 ~g~~vlI~G~g~~G~~ai~~l~~~~g~~~vi~v~~~~~~~~~~~~~g~~~~~~~~~---~~~~~~---------~~i~~~  248 (365)
                      ++.+|+|+|+|.+|..+++ .++.+|+ .|++.++++++.+.++++|+..+. .+.   ....+.         .....+
T Consensus       183 ~~~kV~ViG~G~iG~~aa~-~a~~lGa-~V~v~D~~~~~l~~~~~lGa~~~~-l~~~~~~~~gya~~~~~~~~~~~~~~l  259 (381)
T 3p2y_A          183 KPASALVLGVGVAGLQALA-TAKRLGA-KTTGYDVRPEVAEQVRSVGAQWLD-LGIDAAGEGGYARELSEAERAQQQQAL  259 (381)
T ss_dssp             CCCEEEEESCSHHHHHHHH-HHHHHTC-EEEEECSSGGGHHHHHHTTCEECC-CC-------------CHHHHHHHHHHH
T ss_pred             CCCEEEEECchHHHHHHHH-HHHHCCC-EEEEEeCCHHHHHHHHHcCCeEEe-ccccccccccchhhhhHHHHhhhHHHH
Confidence            6789999999999999999 8889999 689999999999999999976431 100   000111         111112


Q ss_pred             HHHhCCCceEEEeCCCCHH------HHHHHHHhcccCCEEEEEccCC-CCc--cccchHhhhcCcEEEeeccc
Q 017868          249 QKAMGTGIDVSFDCAGLNK------TMSTALGATCAGGKVCLVGMGH-HEM--TVPLTPAAVREVDVVGVFRY  312 (365)
Q Consensus       249 ~~~~~~~~d~vid~~g~~~------~~~~~~~~l~~~G~~~~~g~~~-~~~--~~~~~~~~~~~~~i~~~~~~  312 (365)
                      .+. -..+|+||.++..+.      .....++.+++++.++.++... ...  +.+...+..+++++.+..+.
T Consensus       260 ~e~-l~~aDIVI~tv~iPg~~ap~Lvt~emv~~MkpGsVIVDvA~d~GG~~e~t~~~~~~~~~gV~~~~v~nl  331 (381)
T 3p2y_A          260 EDA-ITKFDIVITTALVPGRPAPRLVTAAAATGMQPGSVVVDLAGETGGNCELTEPGRTIVHHGVTITSPLNL  331 (381)
T ss_dssp             HHH-HTTCSEEEECCCCTTSCCCCCBCHHHHHTSCTTCEEEETTGGGTCSBTTCCTTCEEEETTEEEECCSCT
T ss_pred             HHH-HhcCCEEEECCCCCCcccceeecHHHHhcCCCCcEEEEEeCCCCCccccccCCCeEEECCEEEEeeCCC
Confidence            111 268999999864321      2357888999999999886321 111  11111234466777776554

>1i9g_A Hypothetical protein RV2118C; mtase, adoMet, crystal, structural genomics, protein structure initiative; HET: SAM; 1.98A {Mycobacterium tuberculosis} SCOP: c.66.1.13

Probab=97.82  E-value=6.8e-05  Score=65.39  Aligned_cols=104  Identities=23%  Similarity=0.233  Sum_probs=69.6

Q ss_pred             HHHhcCCCCCCEEEEEcCCHHHHHHHHHHHHHCC-CCeEEEEeCChhHHHHHHHc-----C--CCEEEeCCCCcccHHHH
Q 017868          173 ACRRANIGPETNVLIMGAGPIGLVTMLGAPRAFG-APRIVIVDVDDYRLSVAKEI-----G--ADNIVKVSTNLQDIAEE  244 (365)
Q Consensus       173 ~~~~~~~~~g~~vlI~G~g~~G~~ai~~l~~~~g-~~~vi~v~~~~~~~~~~~~~-----g--~~~~~~~~~~~~~~~~~  244 (365)
                      .+....++++++||..|+| .|..+.. +++..+ ...+++++.+++..+.+++.     |  ...+.....+..+.   
T Consensus        91 i~~~~~~~~~~~vLdiG~G-~G~~~~~-l~~~~~~~~~v~~vD~~~~~~~~a~~~~~~~~g~~~~~v~~~~~d~~~~---  165 (280)
T 1i9g_A           91 IVHEGDIFPGARVLEAGAG-SGALTLS-LLRAVGPAGQVISYEQRADHAEHARRNVSGCYGQPPDNWRLVVSDLADS---  165 (280)
T ss_dssp             HHHHTTCCTTCEEEEECCT-TSHHHHH-HHHHHCTTSEEEEECSCHHHHHHHHHHHHHHHTSCCTTEEEECSCGGGC---
T ss_pred             HHHHcCCCCCCEEEEEccc-ccHHHHH-HHHHhCCCCEEEEEeCCHHHHHHHHHHHHHhcCCCCCcEEEEECchHhc---
Confidence            3456778999999999987 5777777 666543 34899999999887766543     4  22222211211111   


Q ss_pred             HHHHHHHhCCCceEEEeCCCCH-HHHHHHHHhcccCCEEEEEc
Q 017868          245 VEKIQKAMGTGIDVSFDCAGLN-KTMSTALGATCAGGKVCLVG  286 (365)
Q Consensus       245 i~~~~~~~~~~~d~vid~~g~~-~~~~~~~~~l~~~G~~~~~g  286 (365)
                      .     .....+|+|+.....+ ..+..+.++|+++|.+++..
T Consensus       166 ~-----~~~~~~D~v~~~~~~~~~~l~~~~~~L~pgG~l~~~~  203 (280)
T 1i9g_A          166 E-----LPDGSVDRAVLDMLAPWEVLDAVSRLLVAGGVLMVYV  203 (280)
T ss_dssp             C-----CCTTCEEEEEEESSCGGGGHHHHHHHEEEEEEEEEEE
T ss_pred             C-----CCCCceeEEEECCcCHHHHHHHHHHhCCCCCEEEEEe
Confidence            0     0135799998765543 57788899999999998874

>1p91_A Ribosomal RNA large subunit methyltransferase A; RLMA, RRMA, 23S rRNA, NESG, structural genomics, PSI, protein structure initiative; HET: SAM; 2.80A {Escherichia coli} SCOP: c.66.1.33

Probab=97.79  E-value=4.8e-05  Score=65.95  Aligned_cols=94  Identities=18%  Similarity=0.143  Sum_probs=67.1

Q ss_pred             CCCCEEEEEcCCHHHHHHHHHHHHHC-CCCeEEEEeCChhHHHHHHHcCCC-EEEeCCCCcccHHHHHHHHHHHhCCCce
Q 017868          180 GPETNVLIMGAGPIGLVTMLGAPRAF-GAPRIVIVDVDDYRLSVAKEIGAD-NIVKVSTNLQDIAEEVEKIQKAMGTGID  257 (365)
Q Consensus       180 ~~g~~vlI~G~g~~G~~ai~~l~~~~-g~~~vi~v~~~~~~~~~~~~~g~~-~~~~~~~~~~~~~~~i~~~~~~~~~~~d  257 (365)
                      .++.+||..|+|. |..+.. +++.. +. .+++++.+++..+.+++.+.. ..+..+.  .++.        ...+.+|
T Consensus        84 ~~~~~vLdiG~G~-G~~~~~-l~~~~~~~-~v~~vD~s~~~~~~a~~~~~~~~~~~~d~--~~~~--------~~~~~fD  150 (269)
T 1p91_A           84 DKATAVLDIGCGE-GYYTHA-FADALPEI-TTFGLDVSKVAIKAAAKRYPQVTFCVASS--HRLP--------FSDTSMD  150 (269)
T ss_dssp             TTCCEEEEETCTT-STTHHH-HHHTCTTS-EEEEEESCHHHHHHHHHHCTTSEEEECCT--TSCS--------BCTTCEE
T ss_pred             CCCCEEEEECCCC-CHHHHH-HHHhCCCC-eEEEEeCCHHHHHHHHHhCCCcEEEEcch--hhCC--------CCCCcee
Confidence            6788999999977 888888 77665 55 799999999999988776533 2222111  1110        0135799


Q ss_pred             EEEeCCCCHHHHHHHHHhcccCCEEEEEcc
Q 017868          258 VSFDCAGLNKTMSTALGATCAGGKVCLVGM  287 (365)
Q Consensus       258 ~vid~~g~~~~~~~~~~~l~~~G~~~~~g~  287 (365)
                      +|+.... ...+..+.+.|+++|.++....
T Consensus       151 ~v~~~~~-~~~l~~~~~~L~pgG~l~~~~~  179 (269)
T 1p91_A          151 AIIRIYA-PCKAEELARVVKPGGWVITATP  179 (269)
T ss_dssp             EEEEESC-CCCHHHHHHHEEEEEEEEEEEE
T ss_pred             EEEEeCC-hhhHHHHHHhcCCCcEEEEEEc
Confidence            9996443 4578899999999999988753

>3ic5_A Putative saccharopine dehydrogenase; structural genomics, APC63807.2, N-terminal domain, saccharo dehydrogenase, PSI-2; HET: MSE; 2.08A {Ruegeria pomeroyi}

Probab=97.77  E-value=0.00021  Score=53.14  Aligned_cols=96  Identities=23%  Similarity=0.245  Sum_probs=61.9

Q ss_pred             CCCEEEEEcCCHHHHHHHHHHHHHCCCCeEEEEeCChhHHHHHHHcCCCEEEeCCCCcccHHHHHHHHHHHhCCCceEEE
Q 017868          181 PETNVLIMGAGPIGLVTMLGAPRAFGAPRIVIVDVDDYRLSVAKEIGADNIVKVSTNLQDIAEEVEKIQKAMGTGIDVSF  260 (365)
Q Consensus       181 ~g~~vlI~G~g~~G~~ai~~l~~~~g~~~vi~v~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~i~~~~~~~~~~~d~vi  260 (365)
                      .+.+|+|+|+|.+|..+++ .+...|...++++++++++.+.+...+.... ..+-  .+. +.+.+.    -.++|+||
T Consensus         4 ~~~~v~I~G~G~iG~~~~~-~l~~~g~~~v~~~~r~~~~~~~~~~~~~~~~-~~d~--~~~-~~~~~~----~~~~d~vi   74 (118)
T 3ic5_A            4 MRWNICVVGAGKIGQMIAA-LLKTSSNYSVTVADHDLAALAVLNRMGVATK-QVDA--KDE-AGLAKA----LGGFDAVI   74 (118)
T ss_dssp             TCEEEEEECCSHHHHHHHH-HHHHCSSEEEEEEESCHHHHHHHHTTTCEEE-ECCT--TCH-HHHHHH----TTTCSEEE
T ss_pred             CcCeEEEECCCHHHHHHHH-HHHhCCCceEEEEeCCHHHHHHHHhCCCcEE-EecC--CCH-HHHHHH----HcCCCEEE
Confidence            3568999999999999999 5566783368888999988887776665443 2222  121 233333    24799999


Q ss_pred             eCCCCHHHHHHHHHhcccCCEEEEE
Q 017868          261 DCAGLNKTMSTALGATCAGGKVCLV  285 (365)
Q Consensus       261 d~~g~~~~~~~~~~~l~~~G~~~~~  285 (365)
                      ++++........-.+...+-.++.+
T Consensus        75 ~~~~~~~~~~~~~~~~~~g~~~~~~   99 (118)
T 3ic5_A           75 SAAPFFLTPIIAKAAKAAGAHYFDL   99 (118)
T ss_dssp             ECSCGGGHHHHHHHHHHTTCEEECC
T ss_pred             ECCCchhhHHHHHHHHHhCCCEEEe
Confidence            9998654433333344445444433

>2g1u_A Hypothetical protein TM1088A; structural genomics, joint center for structural genomics, J protein structure initiative, PSI-2; HET: AMP; 1.50A {Thermotoga maritima} PDB: 3l4b_A*

Probab=97.58  E-value=0.00015  Score=57.19  Aligned_cols=92  Identities=16%  Similarity=0.195  Sum_probs=61.0

Q ss_pred             CCCCCCEEEEEcCCHHHHHHHHHHHHHCCCCeEEEEeCChhHHHHHH-HcCCCEEEeCCCCcccHHHHHHHHHHHhCCCc
Q 017868          178 NIGPETNVLIMGAGPIGLVTMLGAPRAFGAPRIVIVDVDDYRLSVAK-EIGADNIVKVSTNLQDIAEEVEKIQKAMGTGI  256 (365)
Q Consensus       178 ~~~~g~~vlI~G~g~~G~~ai~~l~~~~g~~~vi~v~~~~~~~~~~~-~~g~~~~~~~~~~~~~~~~~i~~~~~~~~~~~  256 (365)
                      ...++++|+|.|+|.+|..+++ .++..|. .|+++++++++.+.++ ..|... +..+.  .+. +.+++   ....++
T Consensus        15 ~~~~~~~v~IiG~G~iG~~la~-~L~~~g~-~V~vid~~~~~~~~~~~~~g~~~-~~~d~--~~~-~~l~~---~~~~~a   85 (155)
T 2g1u_A           15 KKQKSKYIVIFGCGRLGSLIAN-LASSSGH-SVVVVDKNEYAFHRLNSEFSGFT-VVGDA--AEF-ETLKE---CGMEKA   85 (155)
T ss_dssp             --CCCCEEEEECCSHHHHHHHH-HHHHTTC-EEEEEESCGGGGGGSCTTCCSEE-EESCT--TSH-HHHHT---TTGGGC
T ss_pred             cccCCCcEEEECCCHHHHHHHH-HHHhCCC-eEEEEECCHHHHHHHHhcCCCcE-EEecC--CCH-HHHHH---cCcccC
Confidence            3457889999999999999999 6677798 6888888888877666 566543 32221  121 22221   113579


Q ss_pred             eEEEeCCCCHHHHHHHHHhccc
Q 017868          257 DVSFDCAGLNKTMSTALGATCA  278 (365)
Q Consensus       257 d~vid~~g~~~~~~~~~~~l~~  278 (365)
                      |+||.+++...........++.
T Consensus        86 d~Vi~~~~~~~~~~~~~~~~~~  107 (155)
T 2g1u_A           86 DMVFAFTNDDSTNFFISMNARY  107 (155)
T ss_dssp             SEEEECSSCHHHHHHHHHHHHH
T ss_pred             CEEEEEeCCcHHHHHHHHHHHH
Confidence            9999999986554454444443

>2b25_A Hypothetical protein; structural genomics, methyl transferase, SAM, structural GEN consortium, SGC, transferase; HET: SAM; 2.50A {Homo sapiens} SCOP: c.66.1.13

Probab=97.56  E-value=0.0002  Score=64.24  Aligned_cols=107  Identities=20%  Similarity=0.236  Sum_probs=65.9

Q ss_pred             HHHhcCCCCCCEEEEEcCCHHHHHHHHHHHHHCCC-CeEEEEeCChhHHHHHHHc----C-----------CCEEEeCCC
Q 017868          173 ACRRANIGPETNVLIMGAGPIGLVTMLGAPRAFGA-PRIVIVDVDDYRLSVAKEI----G-----------ADNIVKVST  236 (365)
Q Consensus       173 ~~~~~~~~~g~~vlI~G~g~~G~~ai~~l~~~~g~-~~vi~v~~~~~~~~~~~~~----g-----------~~~~~~~~~  236 (365)
                      .+....+.++++||-.|+|. |..++. +++..|. ..+++++.+++..+.+++.    +           ...+.....
T Consensus        97 ~l~~l~~~~g~~VLDiG~G~-G~~~~~-la~~~g~~~~v~~vD~~~~~~~~a~~~~~~~~~~~~ln~~~~~~~~v~~~~~  174 (336)
T 2b25_A           97 ILSMMDINPGDTVLEAGSGS-GGMSLF-LSKAVGSQGRVISFEVRKDHHDLAKKNYKHWRDSWKLSHVEEWPDNVDFIHK  174 (336)
T ss_dssp             HHHHHTCCTTCEEEEECCTT-SHHHHH-HHHHHCTTCEEEEEESSHHHHHHHHHHHHHHHHHHTTTCSSCCCCCEEEEES
T ss_pred             HHHhcCCCCCCEEEEeCCCc-CHHHHH-HHHHhCCCceEEEEeCCHHHHHHHHHHHHHhhcccccccccccCCceEEEEC
Confidence            34555789999999999866 777777 6666564 5899999999877766542    1           111111111


Q ss_pred             CcccHHHHHHHHHHHhCCCceEEEeCCCCH-HHHHHHHHhcccCCEEEEEcc
Q 017868          237 NLQDIAEEVEKIQKAMGTGIDVSFDCAGLN-KTMSTALGATCAGGKVCLVGM  287 (365)
Q Consensus       237 ~~~~~~~~i~~~~~~~~~~~d~vid~~g~~-~~~~~~~~~l~~~G~~~~~g~  287 (365)
                      +..+..   ..+   ....+|+|+-....+ ..+..+.++|+++|.++....
T Consensus       175 d~~~~~---~~~---~~~~fD~V~~~~~~~~~~l~~~~~~LkpgG~lv~~~~  220 (336)
T 2b25_A          175 DISGAT---EDI---KSLTFDAVALDMLNPHVTLPVFYPHLKHGGVCAVYVV  220 (336)
T ss_dssp             CTTCCC-------------EEEEEECSSSTTTTHHHHGGGEEEEEEEEEEES
T ss_pred             ChHHcc---ccc---CCCCeeEEEECCCCHHHHHHHHHHhcCCCcEEEEEeC
Confidence            111211   111   124699998654433 357788999999999987643

>3gvp_A Adenosylhomocysteinase 3; protein CO-factor complex, hydrolase, NAD, one-carbon metabolism, phosphoprotein; HET: NAD; 2.25A {Homo sapiens} PDB: 3mtg_A*

Probab=97.56  E-value=0.00063  Score=62.12  Aligned_cols=103  Identities=19%  Similarity=0.280  Sum_probs=76.3

Q ss_pred             HHHHHHh--cCCCCCCEEEEEcCCHHHHHHHHHHHHHCCCCeEEEEeCChhHHHHHHHcCCCEEEeCCCCcccHHHHHHH
Q 017868          170 GLHACRR--ANIGPETNVLIMGAGPIGLVTMLGAPRAFGAPRIVIVDVDDYRLSVAKEIGADNIVKVSTNLQDIAEEVEK  247 (365)
Q Consensus       170 a~~~~~~--~~~~~g~~vlI~G~g~~G~~ai~~l~~~~g~~~vi~v~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~i~~  247 (365)
                      .+.++.+  ...-.|++|+|.|.|.+|..+++ .++.+|+ +|++++.++.+...+...|... .       ++    .+
T Consensus       206 ~~~gi~rat~~~L~GktV~ViG~G~IGk~vA~-~Lra~Ga-~Viv~D~dp~ra~~A~~~G~~v-~-------~L----ee  271 (435)
T 3gvp_A          206 ILDGLKRTTDMMFGGKQVVVCGYGEVGKGCCA-ALKAMGS-IVYVTEIDPICALQACMDGFRL-V-------KL----NE  271 (435)
T ss_dssp             HHHHHHHHHCCCCTTCEEEEECCSHHHHHHHH-HHHHTTC-EEEEECSCHHHHHHHHHTTCEE-C-------CH----HH
T ss_pred             HHHHHHHhhCceecCCEEEEEeeCHHHHHHHH-HHHHCCC-EEEEEeCChhhhHHHHHcCCEe-c-------cH----HH
Confidence            4445533  33568999999999999999999 8899999 6888998888776666777532 1       22    22


Q ss_pred             HHHHhCCCceEEEeCCCCHHHHH-HHHHhcccCCEEEEEccCCC
Q 017868          248 IQKAMGTGIDVSFDCAGLNKTMS-TALGATCAGGKVCLVGMGHH  290 (365)
Q Consensus       248 ~~~~~~~~~d~vid~~g~~~~~~-~~~~~l~~~G~~~~~g~~~~  290 (365)
                      .    -...|+++.|.|....+. ..+..+++++.++.+|....
T Consensus       272 a----l~~ADIVi~atgt~~lI~~e~l~~MK~gailINvgrg~~  311 (435)
T 3gvp_A          272 V----IRQVDIVITCTGNKNVVTREHLDRMKNSCIVCNMGHSNT  311 (435)
T ss_dssp             H----TTTCSEEEECSSCSCSBCHHHHHHSCTTEEEEECSSTTT
T ss_pred             H----HhcCCEEEECCCCcccCCHHHHHhcCCCcEEEEecCCCc
Confidence            2    257899999988654454 78899999999988876543

>3d4o_A Dipicolinate synthase subunit A; NP_243269.1, structural GEN joint center for structural genomics, JCSG, protein structu initiative, PSI-2; HET: MSE TAR; 2.10A {Bacillus halodurans}

Probab=97.54  E-value=0.00086  Score=58.85  Aligned_cols=111  Identities=15%  Similarity=0.158  Sum_probs=76.6

Q ss_pred             CCCCEEEEEcCCHHHHHHHHHHHHHCCCCeEEEEeCChhHHHHHHHcCCCEEEeCCCCcccHHHHHHHHHHHhCCCceEE
Q 017868          180 GPETNVLIMGAGPIGLVTMLGAPRAFGAPRIVIVDVDDYRLSVAKEIGADNIVKVSTNLQDIAEEVEKIQKAMGTGIDVS  259 (365)
Q Consensus       180 ~~g~~vlI~G~g~~G~~ai~~l~~~~g~~~vi~v~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~i~~~~~~~~~~~d~v  259 (365)
                      -.|++|+|.|+|.+|.++++ .++.+|+ +|++.+++.++.+.++++|+.. +.+    .++    .+.    -...|+|
T Consensus       153 l~g~~v~IiG~G~iG~~~a~-~l~~~G~-~V~~~dr~~~~~~~~~~~g~~~-~~~----~~l----~~~----l~~aDvV  217 (293)
T 3d4o_A          153 IHGANVAVLGLGRVGMSVAR-KFAALGA-KVKVGARESDLLARIAEMGMEP-FHI----SKA----AQE----LRDVDVC  217 (293)
T ss_dssp             STTCEEEEECCSHHHHHHHH-HHHHTTC-EEEEEESSHHHHHHHHHTTSEE-EEG----GGH----HHH----TTTCSEE
T ss_pred             CCCCEEEEEeeCHHHHHHHH-HHHhCCC-EEEEEECCHHHHHHHHHCCCee-cCh----hhH----HHH----hcCCCEE
Confidence            47899999999999999999 7789999 7888999888877777788653 211    122    222    2579999


Q ss_pred             EeCCCCHHHHHHHHHhcccCCEEEEEccCCCCccccchHhhhcCcEEE
Q 017868          260 FDCAGLNKTMSTALGATCAGGKVCLVGMGHHEMTVPLTPAAVREVDVV  307 (365)
Q Consensus       260 id~~g~~~~~~~~~~~l~~~G~~~~~g~~~~~~~~~~~~~~~~~~~i~  307 (365)
                      +.++.....-...+..+++++.++.++.......+  ......++.+.
T Consensus       218 i~~~p~~~i~~~~l~~mk~~~~lin~ar~~~~~~~--~~a~~~Gv~~~  263 (293)
T 3d4o_A          218 INTIPALVVTANVLAEMPSHTFVIDLASKPGGTDF--RYAEKRGIKAL  263 (293)
T ss_dssp             EECCSSCCBCHHHHHHSCTTCEEEECSSTTCSBCH--HHHHHHTCEEE
T ss_pred             EECCChHHhCHHHHHhcCCCCEEEEecCCCCCCCH--HHHHHCCCEEE
Confidence            99887432223567789999999888754333332  33334455544

>2rir_A Dipicolinate synthase, A chain; structural genomics, APC1343, PSI-2, structure initiative; HET: MSE NAP; 2.79A {Bacillus subtilis}

Probab=97.33  E-value=0.0016  Score=57.38  Aligned_cols=111  Identities=14%  Similarity=0.140  Sum_probs=76.1

Q ss_pred             CCCCEEEEEcCCHHHHHHHHHHHHHCCCCeEEEEeCChhHHHHHHHcCCCEEEeCCCCcccHHHHHHHHHHHhCCCceEE
Q 017868          180 GPETNVLIMGAGPIGLVTMLGAPRAFGAPRIVIVDVDDYRLSVAKEIGADNIVKVSTNLQDIAEEVEKIQKAMGTGIDVS  259 (365)
Q Consensus       180 ~~g~~vlI~G~g~~G~~ai~~l~~~~g~~~vi~v~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~i~~~~~~~~~~~d~v  259 (365)
                      -.|.+|+|.|+|.+|..+++ .++.+|+ +|++.+++.++.+.+.++|+.. +.+    .++    .+.    -...|+|
T Consensus       155 l~g~~v~IiG~G~iG~~~a~-~l~~~G~-~V~~~d~~~~~~~~~~~~g~~~-~~~----~~l----~~~----l~~aDvV  219 (300)
T 2rir_A          155 IHGSQVAVLGLGRTGMTIAR-TFAALGA-NVKVGARSSAHLARITEMGLVP-FHT----DEL----KEH----VKDIDIC  219 (300)
T ss_dssp             STTSEEEEECCSHHHHHHHH-HHHHTTC-EEEEEESSHHHHHHHHHTTCEE-EEG----GGH----HHH----STTCSEE
T ss_pred             CCCCEEEEEcccHHHHHHHH-HHHHCCC-EEEEEECCHHHHHHHHHCCCeE-Ech----hhH----HHH----hhCCCEE
Confidence            46899999999999999999 7788999 7888999888877666777642 221    122    222    2579999


Q ss_pred             EeCCCCHHHHHHHHHhcccCCEEEEEccCCCCccccchHhhhcCcEEE
Q 017868          260 FDCAGLNKTMSTALGATCAGGKVCLVGMGHHEMTVPLTPAAVREVDVV  307 (365)
Q Consensus       260 id~~g~~~~~~~~~~~l~~~G~~~~~g~~~~~~~~~~~~~~~~~~~i~  307 (365)
                      +.++.....-...+..+++++.++.++.......+  .....++..+.
T Consensus       220 i~~~p~~~i~~~~~~~mk~g~~lin~a~g~~~~~~--~~a~~~G~~~i  265 (300)
T 2rir_A          220 INTIPSMILNQTVLSSMTPKTLILDLASRPGGTDF--KYAEKQGIKAL  265 (300)
T ss_dssp             EECCSSCCBCHHHHTTSCTTCEEEECSSTTCSBCH--HHHHHHTCEEE
T ss_pred             EECCChhhhCHHHHHhCCCCCEEEEEeCCCCCcCH--HHHHHCCCEEE
Confidence            99987532223466788999999888764333333  33334455444

>4fgs_A Probable dehydrogenase protein; PSI-biology, nysgrc, structural genomics, NEW YORK structura genomics research consortium, three layer; 1.76A {Rhizobium etli}

Probab=97.23  E-value=0.0045  Score=53.49  Aligned_cols=104  Identities=31%  Similarity=0.385  Sum_probs=68.4

Q ss_pred             CCCEEEEEcC-CHHHHHHHHHHHHHCCCCeEEEEeCChhHHH-HHHHcCCCEE-EeCCC-CcccHHHHHHHHHHHhCCCc
Q 017868          181 PETNVLIMGA-GPIGLVTMLGAPRAFGAPRIVIVDVDDYRLS-VAKEIGADNI-VKVST-NLQDIAEEVEKIQKAMGTGI  256 (365)
Q Consensus       181 ~g~~vlI~G~-g~~G~~ai~~l~~~~g~~~vi~v~~~~~~~~-~~~~~g~~~~-~~~~~-~~~~~~~~i~~~~~~~~~~~  256 (365)
                      +|+.+||+|+ +++|.++++.++ ..|+ +|+.+++++++.+ .++++|.... +..+- +.++..+.+++..+.. +++
T Consensus        28 ~gKvalVTGas~GIG~aiA~~la-~~Ga-~V~i~~r~~~~l~~~~~~~g~~~~~~~~Dv~~~~~v~~~~~~~~~~~-G~i  104 (273)
T 4fgs_A           28 NAKIAVITGATSGIGLAAAKRFV-AEGA-RVFITGRRKDVLDAAIAEIGGGAVGIQADSANLAELDRLYEKVKAEA-GRI  104 (273)
T ss_dssp             TTCEEEEESCSSHHHHHHHHHHH-HTTC-EEEEEESCHHHHHHHHHHHCTTCEEEECCTTCHHHHHHHHHHHHHHH-SCE
T ss_pred             CCCEEEEeCcCCHHHHHHHHHHH-HCCC-EEEEEECCHHHHHHHHHHcCCCeEEEEecCCCHHHHHHHHHHHHHHc-CCC
Confidence            6889999987 999999999554 6699 6788888888765 4577775332 22222 2234444444444333 589


Q ss_pred             eEEEeCCCCH----------H---------------HHHHHHHhcccCCEEEEEcc
Q 017868          257 DVSFDCAGLN----------K---------------TMSTALGATCAGGKVCLVGM  287 (365)
Q Consensus       257 d~vid~~g~~----------~---------------~~~~~~~~l~~~G~~~~~g~  287 (365)
                      |++++++|..          +               ..+.++..|+.+|.++.++.
T Consensus       105 DiLVNNAG~~~~~~~~~~~~e~w~~~~~vNl~g~~~~~~~~~p~m~~~G~IInisS  160 (273)
T 4fgs_A          105 DVLFVNAGGGSMLPLGEVTEEQYDDTFDRNVKGVLFTVQKALPLLARGSSVVLTGS  160 (273)
T ss_dssp             EEEEECCCCCCCCCTTSCCHHHHHHHHHHHTHHHHHHHHHHTTTEEEEEEEEEECC
T ss_pred             CEEEECCCCCCCCChhhccHHHHHHHHHHHhHHHHHHHHHHHHHHhhCCeEEEEee
Confidence            9999988731          1               22235556777888888764

>3c85_A Putative glutathione-regulated potassium-efflux S protein KEFB; TRKA domain; HET: AMP; 1.90A {Vibrio parahaemolyticus rimd 2210633}

Probab=97.22  E-value=0.0015  Score=52.92  Aligned_cols=97  Identities=19%  Similarity=0.172  Sum_probs=63.5

Q ss_pred             CCCEEEEEcCCHHHHHHHHHHHHHC-CCCeEEEEeCChhHHHHHHHcCCCEEEeCCCCcccHHHHHHHHHHHhCCCceEE
Q 017868          181 PETNVLIMGAGPIGLVTMLGAPRAF-GAPRIVIVDVDDYRLSVAKEIGADNIVKVSTNLQDIAEEVEKIQKAMGTGIDVS  259 (365)
Q Consensus       181 ~g~~vlI~G~g~~G~~ai~~l~~~~-g~~~vi~v~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~i~~~~~~~~~~~d~v  259 (365)
                      .+++|+|.|+|.+|..+++ .++.. |. .|+++++++++.+.+++.|...+. -+..+.   +.+++.+  .-.++|+|
T Consensus        38 ~~~~v~IiG~G~~G~~~a~-~L~~~~g~-~V~vid~~~~~~~~~~~~g~~~~~-gd~~~~---~~l~~~~--~~~~ad~v  109 (183)
T 3c85_A           38 GHAQVLILGMGRIGTGAYD-ELRARYGK-ISLGIEIREEAAQQHRSEGRNVIS-GDATDP---DFWERIL--DTGHVKLV  109 (183)
T ss_dssp             TTCSEEEECCSHHHHHHHH-HHHHHHCS-CEEEEESCHHHHHHHHHTTCCEEE-CCTTCH---HHHHTBC--SCCCCCEE
T ss_pred             CCCcEEEECCCHHHHHHHH-HHHhccCC-eEEEEECCHHHHHHHHHCCCCEEE-cCCCCH---HHHHhcc--CCCCCCEE
Confidence            3678999999999999999 66677 88 588889999999888888876433 122111   1122110  13579999


Q ss_pred             EeCCCCHHHHHHHH---HhcccCCEEEEE
Q 017868          260 FDCAGLNKTMSTAL---GATCAGGKVCLV  285 (365)
Q Consensus       260 id~~g~~~~~~~~~---~~l~~~G~~~~~  285 (365)
                      |.+++.........   +.+.+...++..
T Consensus       110 i~~~~~~~~~~~~~~~~~~~~~~~~ii~~  138 (183)
T 3c85_A          110 LLAMPHHQGNQTALEQLQRRNYKGQIAAI  138 (183)
T ss_dssp             EECCSSHHHHHHHHHHHHHTTCCSEEEEE
T ss_pred             EEeCCChHHHHHHHHHHHHHCCCCEEEEE
Confidence            99998754433333   334444555543

>3njr_A Precorrin-6Y methylase; methyltransferase, decarboxylase, transferase; HET: SAH PG4; 2.70A {Rhodobacter capsulatus}

Probab=97.19  E-value=0.0035  Score=51.74  Aligned_cols=103  Identities=13%  Similarity=0.089  Sum_probs=69.4

Q ss_pred             HHHhcCCCCCCEEEEEcCCHHHHHHHHHHHHHCCCCeEEEEeCChhHHHHHHH----cCCC-EEEeCCCCcccHHHHHHH
Q 017868          173 ACRRANIGPETNVLIMGAGPIGLVTMLGAPRAFGAPRIVIVDVDDYRLSVAKE----IGAD-NIVKVSTNLQDIAEEVEK  247 (365)
Q Consensus       173 ~~~~~~~~~g~~vlI~G~g~~G~~ai~~l~~~~g~~~vi~v~~~~~~~~~~~~----~g~~-~~~~~~~~~~~~~~~i~~  247 (365)
                      .+....+.++++||-.|+|. |..++. +++. +. .|++++.+++..+.+++    +|.. .+.....+..+.   +. 
T Consensus        47 ~l~~l~~~~~~~vLDlGcG~-G~~~~~-la~~-~~-~v~~vD~s~~~~~~a~~~~~~~g~~~~v~~~~~d~~~~---~~-  118 (204)
T 3njr_A           47 TLAALAPRRGELLWDIGGGS-GSVSVE-WCLA-GG-RAITIEPRADRIENIQKNIDTYGLSPRMRAVQGTAPAA---LA-  118 (204)
T ss_dssp             HHHHHCCCTTCEEEEETCTT-CHHHHH-HHHT-TC-EEEEEESCHHHHHHHHHHHHHTTCTTTEEEEESCTTGG---GT-
T ss_pred             HHHhcCCCCCCEEEEecCCC-CHHHHH-HHHc-CC-EEEEEeCCHHHHHHHHHHHHHcCCCCCEEEEeCchhhh---cc-
Confidence            44566788999999999875 777777 7666 66 79999999988766543    4554 222221222221   11 


Q ss_pred             HHHHhCCCceEEEeCCCC-HHHHHHHHHhcccCCEEEEEcc
Q 017868          248 IQKAMGTGIDVSFDCAGL-NKTMSTALGATCAGGKVCLVGM  287 (365)
Q Consensus       248 ~~~~~~~~~d~vid~~g~-~~~~~~~~~~l~~~G~~~~~g~  287 (365)
                          ....+|+|+...+. ...+..+.+.|+++|+++....
T Consensus       119 ----~~~~~D~v~~~~~~~~~~l~~~~~~LkpgG~lv~~~~  155 (204)
T 3njr_A          119 ----DLPLPEAVFIGGGGSQALYDRLWEWLAPGTRIVANAV  155 (204)
T ss_dssp             ----TSCCCSEEEECSCCCHHHHHHHHHHSCTTCEEEEEEC
T ss_pred             ----cCCCCCEEEECCcccHHHHHHHHHhcCCCcEEEEEec
Confidence                12479999976443 2267888999999999987643

>3ond_A Adenosylhomocysteinase; plant protein, enzyme-substrate complex, NAD cofactor, regul SAM-dependent methylation reactions; HET: NAD ADN; 1.17A {Lupinus luteus} PDB: 3one_A* 3onf_A*

Probab=97.19  E-value=0.0007  Score=62.96  Aligned_cols=91  Identities=18%  Similarity=0.250  Sum_probs=69.0

Q ss_pred             CCCCEEEEEcCCHHHHHHHHHHHHHCCCCeEEEEeCChhHHHHHHHcCCCEEEeCCCCcccHHHHHHHHHHHhCCCceEE
Q 017868          180 GPETNVLIMGAGPIGLVTMLGAPRAFGAPRIVIVDVDDYRLSVAKEIGADNIVKVSTNLQDIAEEVEKIQKAMGTGIDVS  259 (365)
Q Consensus       180 ~~g~~vlI~G~g~~G~~ai~~l~~~~g~~~vi~v~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~i~~~~~~~~~~~d~v  259 (365)
                      -.|++++|+|+|++|.++++ .++..|+ +|+++++++.+.+.+...+++. ...    ++       .    -..+|++
T Consensus       263 L~GKtVvVtGaGgIG~aiA~-~Laa~GA-~Viv~D~~~~~a~~Aa~~g~dv-~~l----ee-------~----~~~aDvV  324 (488)
T 3ond_A          263 IAGKVAVVAGYGDVGKGCAA-ALKQAGA-RVIVTEIDPICALQATMEGLQV-LTL----ED-------V----VSEADIF  324 (488)
T ss_dssp             CTTCEEEEECCSHHHHHHHH-HHHHTTC-EEEEECSCHHHHHHHHHTTCEE-CCG----GG-------T----TTTCSEE
T ss_pred             ccCCEEEEECCCHHHHHHHH-HHHHCCC-EEEEEcCCHHHHHHHHHhCCcc-CCH----HH-------H----HHhcCEE
Confidence            47899999999999999999 7788899 6888899888877777777532 111    11       1    3579999


Q ss_pred             EeCCCCHHHHH-HHHHhcccCCEEEEEccC
Q 017868          260 FDCAGLNKTMS-TALGATCAGGKVCLVGMG  288 (365)
Q Consensus       260 id~~g~~~~~~-~~~~~l~~~G~~~~~g~~  288 (365)
                      +++.|....+. ..+..+++++.++..|..
T Consensus       325 i~atG~~~vl~~e~l~~mk~gaiVvNaG~~  354 (488)
T 3ond_A          325 VTTTGNKDIIMLDHMKKMKNNAIVCNIGHF  354 (488)
T ss_dssp             EECSSCSCSBCHHHHTTSCTTEEEEESSST
T ss_pred             EeCCCChhhhhHHHHHhcCCCeEEEEcCCC
Confidence            99998654443 377889988888887754

>3e05_A Precorrin-6Y C5,15-methyltransferase (decarboxyla; porphyrin metabolism, S-adenosyl-methionine; 1.80A {Geobacter metallireducens} SCOP: c.66.1.0

Probab=97.18  E-value=0.0037  Score=51.38  Aligned_cols=105  Identities=15%  Similarity=0.160  Sum_probs=70.8

Q ss_pred             HHHhcCCCCCCEEEEEcCCHHHHHHHHHHHHHCCCCeEEEEeCChhHHHHHHH----cCCCEEEeCCCCcccHHHHHHHH
Q 017868          173 ACRRANIGPETNVLIMGAGPIGLVTMLGAPRAFGAPRIVIVDVDDYRLSVAKE----IGADNIVKVSTNLQDIAEEVEKI  248 (365)
Q Consensus       173 ~~~~~~~~~g~~vlI~G~g~~G~~ai~~l~~~~g~~~vi~v~~~~~~~~~~~~----~g~~~~~~~~~~~~~~~~~i~~~  248 (365)
                      .+....++++++||-.|+|. |..++. +++..+...+++++.+++..+.+++    .+.+.+.....+..+.   +.  
T Consensus        32 ~l~~l~~~~~~~vLDiG~G~-G~~~~~-la~~~~~~~v~~vD~s~~~~~~a~~~~~~~~~~~v~~~~~d~~~~---~~--  104 (204)
T 3e05_A           32 TLSKLRLQDDLVMWDIGAGS-ASVSIE-ASNLMPNGRIFALERNPQYLGFIRDNLKKFVARNVTLVEAFAPEG---LD--  104 (204)
T ss_dssp             HHHHTTCCTTCEEEEETCTT-CHHHHH-HHHHCTTSEEEEEECCHHHHHHHHHHHHHHTCTTEEEEECCTTTT---CT--
T ss_pred             HHHHcCCCCCCEEEEECCCC-CHHHHH-HHHHCCCCEEEEEeCCHHHHHHHHHHHHHhCCCcEEEEeCChhhh---hh--
Confidence            34667789999999999875 777777 7777545589999999988776654    3443222111211111   10  


Q ss_pred             HHHhCCCceEEEeCCC---CHHHHHHHHHhcccCCEEEEEcc
Q 017868          249 QKAMGTGIDVSFDCAG---LNKTMSTALGATCAGGKVCLVGM  287 (365)
Q Consensus       249 ~~~~~~~~d~vid~~g---~~~~~~~~~~~l~~~G~~~~~g~  287 (365)
                         ....+|+|+....   ....+..+.+.|+++|+++....
T Consensus       105 ---~~~~~D~i~~~~~~~~~~~~l~~~~~~LkpgG~l~~~~~  143 (204)
T 3e05_A          105 ---DLPDPDRVFIGGSGGMLEEIIDAVDRRLKSEGVIVLNAV  143 (204)
T ss_dssp             ---TSCCCSEEEESCCTTCHHHHHHHHHHHCCTTCEEEEEEC
T ss_pred             ---cCCCCCEEEECCCCcCHHHHHHHHHHhcCCCeEEEEEec
Confidence               1257999998654   24577788999999999998643

>3grz_A L11 mtase, ribosomal protein L11 methyltransferase; methylase, SAM-binding domain, PSI-2, nysgxrc; 2.00A {Lactobacillus delbrueckii subsp}

Probab=97.13  E-value=0.0011  Score=54.76  Aligned_cols=134  Identities=16%  Similarity=0.238  Sum_probs=78.9

Q ss_pred             cceeeEEe-ecCCceEECCCCCCcchhccchhhHHHHHHHHhcCCCCCCEEEEEcCCHHHHHHHHHHHHHCCCCeEEEEe
Q 017868          136 GSLANQVV-HPADLCFKLPDNVSLEEGAMCEPLSVGLHACRRANIGPETNVLIMGAGPIGLVTMLGAPRAFGAPRIVIVD  214 (365)
Q Consensus       136 g~~~~~~~-v~~~~~~~iP~~~~~~~a~~~~~~~~a~~~~~~~~~~~g~~vlI~G~g~~G~~ai~~l~~~~g~~~vi~v~  214 (365)
                      ..|.+|.. .+....+.+++.+++..+.. +........+.. .++++++||-.|+|. |..+.. +++ .+...+++++
T Consensus        16 p~w~~~~~~~~~~~~~~~~~~~~f~~~~~-~~~~~~~~~l~~-~~~~~~~vLDiG~G~-G~~~~~-l~~-~~~~~v~~vD   90 (205)
T 3grz_A           16 PEWEDYQPVFKDQEIIRLDPGLAFGTGNH-QTTQLAMLGIER-AMVKPLTVADVGTGS-GILAIA-AHK-LGAKSVLATD   90 (205)
T ss_dssp             ETTCCCCCSSTTCEEEEESCC-----CCH-HHHHHHHHHHHH-HCSSCCEEEEETCTT-SHHHHH-HHH-TTCSEEEEEE
T ss_pred             ccccccccCCCCceeEEecCCcccCCCCC-ccHHHHHHHHHH-hccCCCEEEEECCCC-CHHHHH-HHH-CCCCEEEEEE
Confidence            44667766 67778888888877665421 111111222222 256889999999865 666666 665 4666899999


Q ss_pred             CChhHHHHHHH----cCCC--EEEeCCCCcccHHHHHHHHHHHhCCCceEEEeCCCCH---HHHHHHHHhcccCCEEEEE
Q 017868          215 VDDYRLSVAKE----IGAD--NIVKVSTNLQDIAEEVEKIQKAMGTGIDVSFDCAGLN---KTMSTALGATCAGGKVCLV  285 (365)
Q Consensus       215 ~~~~~~~~~~~----~g~~--~~~~~~~~~~~~~~~i~~~~~~~~~~~d~vid~~g~~---~~~~~~~~~l~~~G~~~~~  285 (365)
                      .+++..+.+++    .+..  .++.  .+..++          ....+|+|+......   ..+..+.+.|+++|.+++.
T Consensus        91 ~s~~~~~~a~~~~~~~~~~~v~~~~--~d~~~~----------~~~~fD~i~~~~~~~~~~~~l~~~~~~L~~gG~l~~~  158 (205)
T 3grz_A           91 ISDESMTAAEENAALNGIYDIALQK--TSLLAD----------VDGKFDLIVANILAEILLDLIPQLDSHLNEDGQVIFS  158 (205)
T ss_dssp             SCHHHHHHHHHHHHHTTCCCCEEEE--SSTTTT----------CCSCEEEEEEESCHHHHHHHGGGSGGGEEEEEEEEEE
T ss_pred             CCHHHHHHHHHHHHHcCCCceEEEe--cccccc----------CCCCceEEEECCcHHHHHHHHHHHHHhcCCCCEEEEE
Confidence            99987776654    3443  2222  111111          146899999765432   1234556688999998875


Q ss_pred             c
Q 017868          286 G  286 (365)
Q Consensus       286 g  286 (365)
                      .
T Consensus       159 ~  159 (205)
T 3grz_A          159 G  159 (205)
T ss_dssp             E
T ss_pred             e
Confidence            4

>3fwz_A Inner membrane protein YBAL; TRKA-N domain, E.coli, structural genomics, PSI-2, Pro structure initiative; HET: MSE AMP; 1.79A {Escherichia coli k-12}

Probab=97.10  E-value=0.012  Score=45.22  Aligned_cols=96  Identities=10%  Similarity=0.041  Sum_probs=65.1

Q ss_pred             CCCEEEEEcCCHHHHHHHHHHHHHCCCCeEEEEeCChhHHHHHHHcCCCEEEeCCCCcccHHHHHHHHHHHhCCCceEEE
Q 017868          181 PETNVLIMGAGPIGLVTMLGAPRAFGAPRIVIVDVDDYRLSVAKEIGADNIVKVSTNLQDIAEEVEKIQKAMGTGIDVSF  260 (365)
Q Consensus       181 ~g~~vlI~G~g~~G~~ai~~l~~~~g~~~vi~v~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~i~~~~~~~~~~~d~vi  260 (365)
                      -.++|+|.|.|.+|..+++ .++..|. .|++++.++++.+.+++.|...+. -+..+++   .+++.   .-..+|+++
T Consensus         6 ~~~~viIiG~G~~G~~la~-~L~~~g~-~v~vid~~~~~~~~~~~~g~~~i~-gd~~~~~---~l~~a---~i~~ad~vi   76 (140)
T 3fwz_A            6 ICNHALLVGYGRVGSLLGE-KLLASDI-PLVVIETSRTRVDELRERGVRAVL-GNAANEE---IMQLA---HLECAKWLI   76 (140)
T ss_dssp             CCSCEEEECCSHHHHHHHH-HHHHTTC-CEEEEESCHHHHHHHHHTTCEEEE-SCTTSHH---HHHHT---TGGGCSEEE
T ss_pred             CCCCEEEECcCHHHHHHHH-HHHHCCC-CEEEEECCHHHHHHHHHcCCCEEE-CCCCCHH---HHHhc---CcccCCEEE
Confidence            3478999999999999999 6667798 588999999999988888875432 2222222   22221   235799999


Q ss_pred             eCCCCHHHHH---HHHHhcccCCEEEEE
Q 017868          261 DCAGLNKTMS---TALGATCAGGKVCLV  285 (365)
Q Consensus       261 d~~g~~~~~~---~~~~~l~~~G~~~~~  285 (365)
                      -+++......   ...+.+.+..+++..
T Consensus        77 ~~~~~~~~n~~~~~~a~~~~~~~~iiar  104 (140)
T 3fwz_A           77 LTIPNGYEAGEIVASARAKNPDIEIIAR  104 (140)
T ss_dssp             ECCSCHHHHHHHHHHHHHHCSSSEEEEE
T ss_pred             EECCChHHHHHHHHHHHHHCCCCeEEEE
Confidence            9998753222   334455566665543

>3n58_A Adenosylhomocysteinase; ssgcid, hydrolase, structural genomics, seattle structural G center for infectious disease; HET: ADN NAD; 2.39A {Brucella melitensis biovar abortus}

Probab=97.09  E-value=0.0024  Score=58.43  Aligned_cols=94  Identities=16%  Similarity=0.143  Sum_probs=70.8

Q ss_pred             CCCCCCEEEEEcCCHHHHHHHHHHHHHCCCCeEEEEeCChhHHHHHHHcCCCEEEeCCCCcccHHHHHHHHHHHhCCCce
Q 017868          178 NIGPETNVLIMGAGPIGLVTMLGAPRAFGAPRIVIVDVDDYRLSVAKEIGADNIVKVSTNLQDIAEEVEKIQKAMGTGID  257 (365)
Q Consensus       178 ~~~~g~~vlI~G~g~~G~~ai~~l~~~~g~~~vi~v~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~i~~~~~~~~~~~d  257 (365)
                      ..-.|++|+|.|.|.+|..+++ .++.+|+ +|++++.++.+...+...|... .       ++.    +.    -...|
T Consensus       243 ~~L~GKTVgVIG~G~IGr~vA~-~lrafGa-~Viv~d~dp~~a~~A~~~G~~v-v-------~Le----El----L~~AD  304 (464)
T 3n58_A          243 VMMAGKVAVVCGYGDVGKGSAQ-SLAGAGA-RVKVTEVDPICALQAAMDGFEV-V-------TLD----DA----ASTAD  304 (464)
T ss_dssp             CCCTTCEEEEECCSHHHHHHHH-HHHHTTC-EEEEECSSHHHHHHHHHTTCEE-C-------CHH----HH----GGGCS
T ss_pred             CcccCCEEEEECcCHHHHHHHH-HHHHCCC-EEEEEeCCcchhhHHHhcCcee-c-------cHH----HH----HhhCC
Confidence            4568999999999999999999 8899999 6888888887766566666532 1       121    22    14689


Q ss_pred             EEEeCCCCHHHH-HHHHHhcccCCEEEEEccCC
Q 017868          258 VSFDCAGLNKTM-STALGATCAGGKVCLVGMGH  289 (365)
Q Consensus       258 ~vid~~g~~~~~-~~~~~~l~~~G~~~~~g~~~  289 (365)
                      +|+.++|....+ ...+..+++++.++..|...
T Consensus       305 IVv~atgt~~lI~~e~l~~MK~GAILINvGRgd  337 (464)
T 3n58_A          305 IVVTTTGNKDVITIDHMRKMKDMCIVGNIGHFD  337 (464)
T ss_dssp             EEEECCSSSSSBCHHHHHHSCTTEEEEECSSST
T ss_pred             EEEECCCCccccCHHHHhcCCCCeEEEEcCCCC
Confidence            999998865343 47788999999998887543

>4eso_A Putative oxidoreductase; NADP, structural genomics, PSI-biology, NEW structural genomics research consortium, nysgrc; HET: MSE NAP; 1.91A {Sinorhizobium meliloti} PDB: 3vc7_A

Probab=96.97  E-value=0.0097  Score=50.86  Aligned_cols=81  Identities=19%  Similarity=0.271  Sum_probs=51.7

Q ss_pred             CCCEEEEEcC-CHHHHHHHHHHHHHCCCCeEEEEeCChhHHHHH-HHcCCCE-EEeCCC-CcccHHHHHHHHHHHhCCCc
Q 017868          181 PETNVLIMGA-GPIGLVTMLGAPRAFGAPRIVIVDVDDYRLSVA-KEIGADN-IVKVST-NLQDIAEEVEKIQKAMGTGI  256 (365)
Q Consensus       181 ~g~~vlI~G~-g~~G~~ai~~l~~~~g~~~vi~v~~~~~~~~~~-~~~g~~~-~~~~~~-~~~~~~~~i~~~~~~~~~~~  256 (365)
                      .|+++||+|+ +++|.++++.++ ..|+ +|+.+++++++.+.+ ++++... .+..+- +.++....+++..+. -+++
T Consensus         7 ~gk~~lVTGas~gIG~a~a~~l~-~~G~-~V~~~~r~~~~~~~~~~~~~~~~~~~~~Dv~~~~~v~~~~~~~~~~-~g~i   83 (255)
T 4eso_A            7 QGKKAIVIGGTHGMGLATVRRLV-EGGA-EVLLTGRNESNIARIREEFGPRVHALRSDIADLNEIAVLGAAAGQT-LGAI   83 (255)
T ss_dssp             TTCEEEEETCSSHHHHHHHHHHH-HTTC-EEEEEESCHHHHHHHHHHHGGGEEEEECCTTCHHHHHHHHHHHHHH-HSSE
T ss_pred             CCCEEEEECCCCHHHHHHHHHHH-HCCC-EEEEEeCCHHHHHHHHHHhCCcceEEEccCCCHHHHHHHHHHHHHH-hCCC
Confidence            5789999987 999999999555 5599 677888888776543 4555332 222222 222333333333332 3589


Q ss_pred             eEEEeCCC
Q 017868          257 DVSFDCAG  264 (365)
Q Consensus       257 d~vid~~g  264 (365)
                      |+++.++|
T Consensus        84 d~lv~nAg   91 (255)
T 4eso_A           84 DLLHINAG   91 (255)
T ss_dssp             EEEEECCC
T ss_pred             CEEEECCC
Confidence            99999887

>1jg1_A PIMT;, protein-L-isoaspartate O-methyltransferase; rossmann methyltransferase, protein repair isomerization; HET: SAH; 1.20A {Pyrococcus furiosus} SCOP: c.66.1.7 PDB: 1jg2_A* 1jg3_A* 1jg4_A*

Probab=96.97  E-value=0.0013  Score=55.58  Aligned_cols=103  Identities=21%  Similarity=0.228  Sum_probs=67.8

Q ss_pred             HHHHhcCCCCCCEEEEEcCCHHHHHHHHHHHHHCCCCeEEEEeCChhHHHHHHH----cCCCEEEeCCCCcccHHHHHHH
Q 017868          172 HACRRANIGPETNVLIMGAGPIGLVTMLGAPRAFGAPRIVIVDVDDYRLSVAKE----IGADNIVKVSTNLQDIAEEVEK  247 (365)
Q Consensus       172 ~~~~~~~~~~g~~vlI~G~g~~G~~ai~~l~~~~g~~~vi~v~~~~~~~~~~~~----~g~~~~~~~~~~~~~~~~~i~~  247 (365)
                      ..++...++++++||..|+| .|..++. +++..+ ..+++++.+++..+.+++    .+...+.....   +....+  
T Consensus        82 ~~~~~l~~~~~~~vLdiG~G-~G~~~~~-la~~~~-~~v~~vD~~~~~~~~a~~~~~~~~~~~v~~~~~---d~~~~~--  153 (235)
T 1jg1_A           82 IMLEIANLKPGMNILEVGTG-SGWNAAL-ISEIVK-TDVYTIERIPELVEFAKRNLERAGVKNVHVILG---DGSKGF--  153 (235)
T ss_dssp             HHHHHHTCCTTCCEEEECCT-TSHHHHH-HHHHHC-SCEEEEESCHHHHHHHHHHHHHTTCCSEEEEES---CGGGCC--
T ss_pred             HHHHhcCCCCCCEEEEEeCC-cCHHHHH-HHHHhC-CEEEEEeCCHHHHHHHHHHHHHcCCCCcEEEEC---CcccCC--
Confidence            34455578899999999987 5888888 777766 479999999887766654    45433221111   110001  


Q ss_pred             HHHHhCCCceEEEeCCCCHHHHHHHHHhcccCCEEEEE
Q 017868          248 IQKAMGTGIDVSFDCAGLNKTMSTALGATCAGGKVCLV  285 (365)
Q Consensus       248 ~~~~~~~~~d~vid~~g~~~~~~~~~~~l~~~G~~~~~  285 (365)
                       .  ...++|+|+...........+.+.|+++|++++.
T Consensus       154 -~--~~~~fD~Ii~~~~~~~~~~~~~~~L~pgG~lvi~  188 (235)
T 1jg1_A          154 -P--PKAPYDVIIVTAGAPKIPEPLIEQLKIGGKLIIP  188 (235)
T ss_dssp             -G--GGCCEEEEEECSBBSSCCHHHHHTEEEEEEEEEE
T ss_pred             -C--CCCCccEEEECCcHHHHHHHHHHhcCCCcEEEEE
Confidence             0  1346999998665443445788899999998765

>3oig_A Enoyl-[acyl-carrier-protein] reductase [NADH]; fatty acid synthesis, rossmann-like fold, enoyl-ACP reductas binding; HET: NAD IMJ; 1.25A {Bacillus subtilis} SCOP: c.2.1.2 PDB: 3oif_A* 2qio_A* 3oje_A 3ojf_A*

Probab=96.93  E-value=0.013  Score=50.30  Aligned_cols=81  Identities=17%  Similarity=0.186  Sum_probs=48.7

Q ss_pred             CCCEEEEEcC-CH--HHHHHHHHHHHHCCCCeEEEEeCChhHHHH----HHHcCC--CEEEeCCC-CcccHHHHHHHHHH
Q 017868          181 PETNVLIMGA-GP--IGLVTMLGAPRAFGAPRIVIVDVDDYRLSV----AKEIGA--DNIVKVST-NLQDIAEEVEKIQK  250 (365)
Q Consensus       181 ~g~~vlI~G~-g~--~G~~ai~~l~~~~g~~~vi~v~~~~~~~~~----~~~~g~--~~~~~~~~-~~~~~~~~i~~~~~  250 (365)
                      .+.++||+|+ |.  +|.++++.++ ..|+ +|+.++++++..+.    .++++.  ...+..+- +.+++.+.++++.+
T Consensus         6 ~~k~vlVTGasg~~GIG~~ia~~l~-~~G~-~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~D~~~~~~v~~~~~~~~~   83 (266)
T 3oig_A            6 EGRNIVVMGVANKRSIAWGIARSLH-EAGA-RLIFTYAGERLEKSVHELAGTLDRNDSIILPCDVTNDAEIETCFASIKE   83 (266)
T ss_dssp             TTCEEEEECCCSTTSHHHHHHHHHH-HTTC-EEEEEESSGGGHHHHHHHHHTSSSCCCEEEECCCSSSHHHHHHHHHHHH
T ss_pred             CCCEEEEEcCCCCCcHHHHHHHHHH-HCCC-EEEEecCchHHHHHHHHHHHhcCCCCceEEeCCCCCHHHHHHHHHHHHH
Confidence            4678999986 55  9999999555 5599 56777676644333    333333  22222222 23344444444443


Q ss_pred             HhCCCceEEEeCCC
Q 017868          251 AMGTGIDVSFDCAG  264 (365)
Q Consensus       251 ~~~~~~d~vid~~g  264 (365)
                      . .+++|+++.++|
T Consensus        84 ~-~g~id~li~~Ag   96 (266)
T 3oig_A           84 Q-VGVIHGIAHCIA   96 (266)
T ss_dssp             H-HSCCCEEEECCC
T ss_pred             H-hCCeeEEEEccc
Confidence            3 257999999887

>3hm2_A Precorrin-6Y C5,15-methyltransferase; alpha-beta-sandwich, structural genomics, PSI-2, protein structure initiative; 2.21A {Corynebacterium diphtheriae}

Probab=96.91  E-value=0.0045  Score=49.44  Aligned_cols=104  Identities=17%  Similarity=0.237  Sum_probs=69.7

Q ss_pred             HHhcCCCCCCEEEEEcCCHHHHHHHHHHHHHCCCCeEEEEeCChhHHHHHHH----cCCC-EEEeCCCCcccHHHHHHHH
Q 017868          174 CRRANIGPETNVLIMGAGPIGLVTMLGAPRAFGAPRIVIVDVDDYRLSVAKE----IGAD-NIVKVSTNLQDIAEEVEKI  248 (365)
Q Consensus       174 ~~~~~~~~g~~vlI~G~g~~G~~ai~~l~~~~g~~~vi~v~~~~~~~~~~~~----~g~~-~~~~~~~~~~~~~~~i~~~  248 (365)
                      +....++++++||-.|+|. |..+.. +++..+...+++++.+++..+.+++    .+.. .+ .+..+..+   .+.  
T Consensus        18 ~~~~~~~~~~~vldiG~G~-G~~~~~-l~~~~~~~~v~~vD~~~~~~~~a~~~~~~~~~~~~~-~~~~d~~~---~~~--   89 (178)
T 3hm2_A           18 ISALAPKPHETLWDIGGGS-GSIAIE-WLRSTPQTTAVCFEISEERRERILSNAINLGVSDRI-AVQQGAPR---AFD--   89 (178)
T ss_dssp             HHHHCCCTTEEEEEESTTT-THHHHH-HHTTSSSEEEEEECSCHHHHHHHHHHHHTTTCTTSE-EEECCTTG---GGG--
T ss_pred             HHHhcccCCCeEEEeCCCC-CHHHHH-HHHHCCCCeEEEEeCCHHHHHHHHHHHHHhCCCCCE-EEecchHh---hhh--
Confidence            4555778999999999875 888888 7666654589999999988776654    3544 23 22222111   111  


Q ss_pred             HHHhCCCceEEEeCCCC--HHHHHHHHHhcccCCEEEEEcc
Q 017868          249 QKAMGTGIDVSFDCAGL--NKTMSTALGATCAGGKVCLVGM  287 (365)
Q Consensus       249 ~~~~~~~~d~vid~~g~--~~~~~~~~~~l~~~G~~~~~g~  287 (365)
                        .....+|+|+.....  ...+..+.+.|+++|.++....
T Consensus        90 --~~~~~~D~i~~~~~~~~~~~l~~~~~~L~~gG~l~~~~~  128 (178)
T 3hm2_A           90 --DVPDNPDVIFIGGGLTAPGVFAAAWKRLPVGGRLVANAV  128 (178)
T ss_dssp             --GCCSCCSEEEECC-TTCTTHHHHHHHTCCTTCEEEEEEC
T ss_pred             --ccCCCCCEEEECCcccHHHHHHHHHHhcCCCCEEEEEee
Confidence              012689999975432  3367889999999999987643

>2nyu_A Putative ribosomal RNA methyltransferase 2; SAM, structural genomics, structural genomics consortium, SGC; HET: SAM; 1.76A {Homo sapiens}

Probab=96.83  E-value=0.0047  Score=50.30  Aligned_cols=101  Identities=18%  Similarity=0.211  Sum_probs=62.3

Q ss_pred             cCCCCCCEEEEEcCCHHHHHHHHHHHHHCCC---------CeEEEEeCChhHHHHHHHcCCCEEE-eCCCCcccHHHHHH
Q 017868          177 ANIGPETNVLIMGAGPIGLVTMLGAPRAFGA---------PRIVIVDVDDYRLSVAKEIGADNIV-KVSTNLQDIAEEVE  246 (365)
Q Consensus       177 ~~~~~g~~vlI~G~g~~G~~ai~~l~~~~g~---------~~vi~v~~~~~~~~~~~~~g~~~~~-~~~~~~~~~~~~i~  246 (365)
                      ..++++++||..|+|. |..+.. +++..+.         ..+++++.++...     +.....+ ..+-...+....+.
T Consensus        18 ~~~~~~~~vLDlGcG~-G~~~~~-la~~~~~~~~~~~~~~~~v~~vD~s~~~~-----~~~~~~~~~~d~~~~~~~~~~~   90 (196)
T 2nyu_A           18 QILRPGLRVLDCGAAP-GAWSQV-AVQKVNAAGTDPSSPVGFVLGVDLLHIFP-----LEGATFLCPADVTDPRTSQRIL   90 (196)
T ss_dssp             CCCCTTCEEEEETCCS-CHHHHH-HHHHTTTTCCCTTSCCCEEEEECSSCCCC-----CTTCEEECSCCTTSHHHHHHHH
T ss_pred             CCCCCCCEEEEeCCCC-CHHHHH-HHHHhccccccccCCCceEEEEechhccc-----CCCCeEEEeccCCCHHHHHHHH
Confidence            3468899999999877 888888 7777764         4799999887431     1111222 21111112222222


Q ss_pred             HHHHHhCCCceEEEe-----CCCCH------------HHHHHHHHhcccCCEEEEEc
Q 017868          247 KIQKAMGTGIDVSFD-----CAGLN------------KTMSTALGATCAGGKVCLVG  286 (365)
Q Consensus       247 ~~~~~~~~~~d~vid-----~~g~~------------~~~~~~~~~l~~~G~~~~~g  286 (365)
                      ...  .+..+|+|+.     +++..            ..+..+.+.|+++|++++..
T Consensus        91 ~~~--~~~~fD~V~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~LkpgG~lv~~~  145 (196)
T 2nyu_A           91 EVL--PGRRADVILSDMAPNATGFRDLDHDRLISLCLTLLSVTPDILQPGGTFLCKT  145 (196)
T ss_dssp             HHS--GGGCEEEEEECCCCCCCSCHHHHHHHHHHHHHHHHHHHHHHEEEEEEEEEEE
T ss_pred             Hhc--CCCCCcEEEeCCCCCCCCCcccCHHHHHHHHHHHHHHHHHHhcCCCEEEEEe
Confidence            221  2357999994     33322            35667888999999998763

>3llv_A Exopolyphosphatase-related protein; NAD(P)-binding, rossmann, PSI, M structural genomics; 1.70A {Archaeoglobus fulgidus}

Probab=96.80  E-value=0.007  Score=46.46  Aligned_cols=76  Identities=13%  Similarity=0.200  Sum_probs=54.2

Q ss_pred             CCEEEEEcCCHHHHHHHHHHHHHCCCCeEEEEeCChhHHHHHHHcCCCEEEeCCCCcccHHHHHHHHHHHhCCCceEEEe
Q 017868          182 ETNVLIMGAGPIGLVTMLGAPRAFGAPRIVIVDVDDYRLSVAKEIGADNIVKVSTNLQDIAEEVEKIQKAMGTGIDVSFD  261 (365)
Q Consensus       182 g~~vlI~G~g~~G~~ai~~l~~~~g~~~vi~v~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~i~~~~~~~~~~~d~vid  261 (365)
                      ..+++|.|+|.+|..+++ .+...|. .|++++.++++.+.+++.+... +..+..++   +.+++.   .-.++|++|.
T Consensus         6 ~~~v~I~G~G~iG~~la~-~L~~~g~-~V~~id~~~~~~~~~~~~~~~~-~~gd~~~~---~~l~~~---~~~~~d~vi~   76 (141)
T 3llv_A            6 RYEYIVIGSEAAGVGLVR-ELTAAGK-KVLAVDKSKEKIELLEDEGFDA-VIADPTDE---SFYRSL---DLEGVSAVLI   76 (141)
T ss_dssp             CCSEEEECCSHHHHHHHH-HHHHTTC-CEEEEESCHHHHHHHHHTTCEE-EECCTTCH---HHHHHS---CCTTCSEEEE
T ss_pred             CCEEEEECCCHHHHHHHH-HHHHCCC-eEEEEECCHHHHHHHHHCCCcE-EECCCCCH---HHHHhC---CcccCCEEEE
Confidence            468999999999999999 5566798 5888899999988888777643 33222222   223221   2357999999


Q ss_pred             CCCCH
Q 017868          262 CAGLN  266 (365)
Q Consensus       262 ~~g~~  266 (365)
                      +++..
T Consensus        77 ~~~~~   81 (141)
T 3llv_A           77 TGSDD   81 (141)
T ss_dssp             CCSCH
T ss_pred             ecCCH
Confidence            99964

>3grk_A Enoyl-(acyl-carrier-protein) reductase (NADH); ssgcid, niaid, structural genomics, seattle structural genomics center for infectious disease; 2.35A {Brucella melitensis} PDB: 4eit_A*

Probab=96.80  E-value=0.02  Score=50.08  Aligned_cols=83  Identities=20%  Similarity=0.163  Sum_probs=50.3

Q ss_pred             CCCCEEEEEcC-CH--HHHHHHHHHHHHCCCCeEEEEeCChhHHHH----HHHcCCCEEEeCCCC-cccHHHHHHHHHHH
Q 017868          180 GPETNVLIMGA-GP--IGLVTMLGAPRAFGAPRIVIVDVDDYRLSV----AKEIGADNIVKVSTN-LQDIAEEVEKIQKA  251 (365)
Q Consensus       180 ~~g~~vlI~G~-g~--~G~~ai~~l~~~~g~~~vi~v~~~~~~~~~----~~~~g~~~~~~~~~~-~~~~~~~i~~~~~~  251 (365)
                      -.++++||+|+ |.  +|.++++.++ ..|+ +|+.++++++..+.    .++.+....+..+-. .++..+.++++.+.
T Consensus        29 l~gk~~lVTGasg~~GIG~aia~~la-~~G~-~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~Dv~d~~~v~~~~~~~~~~  106 (293)
T 3grk_A           29 LQGKRGLILGVANNRSIAWGIAKAAR-EAGA-ELAFTYQGDALKKRVEPLAEELGAFVAGHCDVADAASIDAVFETLEKK  106 (293)
T ss_dssp             TTTCEEEEECCCSSSSHHHHHHHHHH-HTTC-EEEEEECSHHHHHHHHHHHHHHTCEEEEECCTTCHHHHHHHHHHHHHH
T ss_pred             CCCCEEEEEcCCCCCcHHHHHHHHHH-HCCC-EEEEEcCCHHHHHHHHHHHHhcCCceEEECCCCCHHHHHHHHHHHHHh
Confidence            46789999986 55  9999999454 5699 57777777543332    333443333333322 23333344444332


Q ss_pred             hCCCceEEEeCCCC
Q 017868          252 MGTGIDVSFDCAGL  265 (365)
Q Consensus       252 ~~~~~d~vid~~g~  265 (365)
                       -+++|++|.++|.
T Consensus       107 -~g~iD~lVnnAG~  119 (293)
T 3grk_A          107 -WGKLDFLVHAIGF  119 (293)
T ss_dssp             -TSCCSEEEECCCC
T ss_pred             -cCCCCEEEECCcc
Confidence             3589999998873

>3lbf_A Protein-L-isoaspartate O-methyltransferase; modified rossman-type fold, S-adenosyl-L- methionine; HET: SAH; 1.80A {Escherichia coli}

Probab=96.79  E-value=0.0023  Score=52.89  Aligned_cols=101  Identities=15%  Similarity=0.134  Sum_probs=66.5

Q ss_pred             HHHhcCCCCCCEEEEEcCCHHHHHHHHHHHHHCCCCeEEEEeCChhHHHHHHH----cCCCEEEeCCCCcccHHHHHHHH
Q 017868          173 ACRRANIGPETNVLIMGAGPIGLVTMLGAPRAFGAPRIVIVDVDDYRLSVAKE----IGADNIVKVSTNLQDIAEEVEKI  248 (365)
Q Consensus       173 ~~~~~~~~~g~~vlI~G~g~~G~~ai~~l~~~~g~~~vi~v~~~~~~~~~~~~----~g~~~~~~~~~~~~~~~~~i~~~  248 (365)
                      .++...++++++||-.|+|. |..+.. +++. +. .+++++.+++..+.+++    .+...+.....+..+   ...  
T Consensus        69 ~~~~l~~~~~~~vLdiG~G~-G~~~~~-la~~-~~-~v~~vD~~~~~~~~a~~~~~~~~~~~v~~~~~d~~~---~~~--  139 (210)
T 3lbf_A           69 MTELLELTPQSRVLEIGTGS-GYQTAI-LAHL-VQ-HVCSVERIKGLQWQARRRLKNLDLHNVSTRHGDGWQ---GWQ--  139 (210)
T ss_dssp             HHHHTTCCTTCEEEEECCTT-SHHHHH-HHHH-SS-EEEEEESCHHHHHHHHHHHHHTTCCSEEEEESCGGG---CCG--
T ss_pred             HHHhcCCCCCCEEEEEcCCC-CHHHHH-HHHh-CC-EEEEEecCHHHHHHHHHHHHHcCCCceEEEECCccc---CCc--
Confidence            34666788999999999874 777777 6666 55 79999999988776654    354322211111111   010  


Q ss_pred             HHHhCCCceEEEeCCCCHHHHHHHHHhcccCCEEEEE
Q 017868          249 QKAMGTGIDVSFDCAGLNKTMSTALGATCAGGKVCLV  285 (365)
Q Consensus       249 ~~~~~~~~d~vid~~g~~~~~~~~~~~l~~~G~~~~~  285 (365)
                         ....+|+|+...........+.+.|+++|+++..
T Consensus       140 ---~~~~~D~i~~~~~~~~~~~~~~~~L~pgG~lv~~  173 (210)
T 3lbf_A          140 ---ARAPFDAIIVTAAPPEIPTALMTQLDEGGILVLP  173 (210)
T ss_dssp             ---GGCCEEEEEESSBCSSCCTHHHHTEEEEEEEEEE
T ss_pred             ---cCCCccEEEEccchhhhhHHHHHhcccCcEEEEE
Confidence               1368999998654333344678899999998875

>2pwy_A TRNA (adenine-N(1)-)-methyltransferase; mtase, adoMet, TRMI, tRNA-M1A58; HET: SAH; 1.70A {Thermus thermophilus}

Probab=96.79  E-value=0.0057  Score=52.18  Aligned_cols=104  Identities=17%  Similarity=0.094  Sum_probs=70.9

Q ss_pred             HHHhcCCCCCCEEEEEcCCHHHHHHHHHHHHHCC-CCeEEEEeCChhHHHHHHHc-----CCCEEEeCCCCcccHHHHHH
Q 017868          173 ACRRANIGPETNVLIMGAGPIGLVTMLGAPRAFG-APRIVIVDVDDYRLSVAKEI-----GADNIVKVSTNLQDIAEEVE  246 (365)
Q Consensus       173 ~~~~~~~~~g~~vlI~G~g~~G~~ai~~l~~~~g-~~~vi~v~~~~~~~~~~~~~-----g~~~~~~~~~~~~~~~~~i~  246 (365)
                      .+....++++++||..|+|. |..+.. +++..+ ...+++++.+++..+.+++.     |...+.....+..+.     
T Consensus        88 ~~~~~~~~~~~~vLdiG~G~-G~~~~~-l~~~~~~~~~v~~~D~~~~~~~~a~~~~~~~~g~~~v~~~~~d~~~~-----  160 (258)
T 2pwy_A           88 MVTLLDLAPGMRVLEAGTGS-GGLTLF-LARAVGEKGLVESYEARPHHLAQAERNVRAFWQVENVRFHLGKLEEA-----  160 (258)
T ss_dssp             HHHHTTCCTTCEEEEECCTT-SHHHHH-HHHHHCTTSEEEEEESCHHHHHHHHHHHHHHCCCCCEEEEESCGGGC-----
T ss_pred             HHHHcCCCCCCEEEEECCCc-CHHHHH-HHHHhCCCCEEEEEeCCHHHHHHHHHHHHHhcCCCCEEEEECchhhc-----
Confidence            44667789999999999875 777777 766644 34899999999888776554     533222111111111     


Q ss_pred             HHHHHhCCCceEEEeCCCCH-HHHHHHHHhcccCCEEEEEc
Q 017868          247 KIQKAMGTGIDVSFDCAGLN-KTMSTALGATCAGGKVCLVG  286 (365)
Q Consensus       247 ~~~~~~~~~~d~vid~~g~~-~~~~~~~~~l~~~G~~~~~g  286 (365)
                         ......+|+|+...... ..+..+.++|+++|.++.+.
T Consensus       161 ---~~~~~~~D~v~~~~~~~~~~l~~~~~~L~~gG~l~~~~  198 (258)
T 2pwy_A          161 ---ELEEAAYDGVALDLMEPWKVLEKAALALKPDRFLVAYL  198 (258)
T ss_dssp             ---CCCTTCEEEEEEESSCGGGGHHHHHHHEEEEEEEEEEE
T ss_pred             ---CCCCCCcCEEEECCcCHHHHHHHHHHhCCCCCEEEEEe
Confidence               00135799999766544 57788999999999998874

>3h9u_A Adenosylhomocysteinase; NAD CO-factor complex, structural genomics, SGC stockholm, S genomics consortium, SGC, hydrolase, NAD; HET: NAD ADN PG4; 1.90A {Trypanosoma brucei} PDB: 3g1u_A* 1b3r_A* 1k0u_A* 1ky4_A* 2h5l_A* 1xwf_A* 1d4f_A* 1ky5_A* 3nj4_A* 1li4_A* 1a7a_A*

Probab=96.78  E-value=0.0042  Score=56.83  Aligned_cols=92  Identities=21%  Similarity=0.288  Sum_probs=68.9

Q ss_pred             CCCCCCEEEEEcCCHHHHHHHHHHHHHCCCCeEEEEeCChhHHHHHHHcCCCEEEeCCCCcccHHHHHHHHHHHhCCCce
Q 017868          178 NIGPETNVLIMGAGPIGLVTMLGAPRAFGAPRIVIVDVDDYRLSVAKEIGADNIVKVSTNLQDIAEEVEKIQKAMGTGID  257 (365)
Q Consensus       178 ~~~~g~~vlI~G~g~~G~~ai~~l~~~~g~~~vi~v~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~i~~~~~~~~~~~d  257 (365)
                      ..-.|.+|+|.|.|.+|..+++ .++.+|+ +|+++++++.+...+...|....        ++    .+.    -...|
T Consensus       207 ~~L~GktVgIiG~G~IG~~vA~-~Lka~Ga-~Viv~D~~p~~a~~A~~~G~~~~--------sL----~ea----l~~AD  268 (436)
T 3h9u_A          207 VMIAGKTACVCGYGDVGKGCAA-ALRGFGA-RVVVTEVDPINALQAAMEGYQVL--------LV----EDV----VEEAH  268 (436)
T ss_dssp             CCCTTCEEEEECCSHHHHHHHH-HHHHTTC-EEEEECSCHHHHHHHHHTTCEEC--------CH----HHH----TTTCS
T ss_pred             CcccCCEEEEEeeCHHHHHHHH-HHHHCCC-EEEEECCChhhhHHHHHhCCeec--------CH----HHH----HhhCC
Confidence            3347899999999999999999 8889999 68889988887777777775321        22    222    25799


Q ss_pred             EEEeCCCCHHHHH-HHHHhcccCCEEEEEcc
Q 017868          258 VSFDCAGLNKTMS-TALGATCAGGKVCLVGM  287 (365)
Q Consensus       258 ~vid~~g~~~~~~-~~~~~l~~~G~~~~~g~  287 (365)
                      +++.+.+....+. ..+..++++..++.++.
T Consensus       269 VVilt~gt~~iI~~e~l~~MK~gAIVINvgR  299 (436)
T 3h9u_A          269 IFVTTTGNDDIITSEHFPRMRDDAIVCNIGH  299 (436)
T ss_dssp             EEEECSSCSCSBCTTTGGGCCTTEEEEECSS
T ss_pred             EEEECCCCcCccCHHHHhhcCCCcEEEEeCC
Confidence            9999887543333 56778888888887764

>3cea_A MYO-inositol 2-dehydrogenase; NP_786804.1, oxidoreductase FA NAD-binding rossmann fold, structural genomics; HET: NAD; 2.40A {Lactobacillus plantarum WCFS1}

Probab=96.73  E-value=0.008  Score=53.89  Aligned_cols=130  Identities=15%  Similarity=0.222  Sum_probs=81.3

Q ss_pred             CEEEEEcCCHHHHHHHHHHH-HHCCCCeEEEEeCChhHHH-HHHHcCCCEEEeCCCCcccHHHHHHHHHHHhCCCceEEE
Q 017868          183 TNVLIMGAGPIGLVTMLGAP-RAFGAPRIVIVDVDDYRLS-VAKEIGADNIVKVSTNLQDIAEEVEKIQKAMGTGIDVSF  260 (365)
Q Consensus       183 ~~vlI~G~g~~G~~ai~~l~-~~~g~~~vi~v~~~~~~~~-~~~~~g~~~~~~~~~~~~~~~~~i~~~~~~~~~~~d~vi  260 (365)
                      -+|.|+|+|.+|...++.+. +..+++.+.+.++++++.+ +++++|...+..      ++.+.+    +  ...+|+|+
T Consensus         9 ~~v~iiG~G~ig~~~~~~l~~~~~~~~~vav~d~~~~~~~~~a~~~g~~~~~~------~~~~~l----~--~~~~D~V~   76 (346)
T 3cea_A            9 LRAAIIGLGRLGERHARHLVNKIQGVKLVAACALDSNQLEWAKNELGVETTYT------NYKDMI----D--TENIDAIF   76 (346)
T ss_dssp             EEEEEECCSTTHHHHHHHHHHTCSSEEEEEEECSCHHHHHHHHHTTCCSEEES------CHHHHH----T--TSCCSEEE
T ss_pred             ceEEEEcCCHHHHHHHHHHHhcCCCcEEEEEecCCHHHHHHHHHHhCCCcccC------CHHHHh----c--CCCCCEEE
Confidence            47889999999998888444 3456755566788887765 456778754331      333222    1  34799999


Q ss_pred             eCCCCHHHHHHHHHhcccCCEEEEEccCCCCccccch---Hh----hhc-CcEEEeecc--cCCcHHHHHHHHHcCCC
Q 017868          261 DCAGLNKTMSTALGATCAGGKVCLVGMGHHEMTVPLT---PA----AVR-EVDVVGVFR--YKNTWPLCLELLRSGKI  328 (365)
Q Consensus       261 d~~g~~~~~~~~~~~l~~~G~~~~~g~~~~~~~~~~~---~~----~~~-~~~i~~~~~--~~~~~~~~~~~l~~g~~  328 (365)
                      .|+....+...+..++..+ +-+++.-   +......   .+    -.+ ++.+.-.+.  +...+..+.+++++|.+
T Consensus        77 i~tp~~~h~~~~~~al~~G-~~v~~eK---p~~~~~~~~~~l~~~a~~~~~~~~~~~~~~r~~p~~~~~~~~i~~g~i  150 (346)
T 3cea_A           77 IVAPTPFHPEMTIYAMNAG-LNVFCEK---PLGLDFNEVDEMAKVIKSHPNQIFQSGFMRRYDDSYRYAKKIVDNGDI  150 (346)
T ss_dssp             ECSCGGGHHHHHHHHHHTT-CEEEECS---CCCSCHHHHHHHHHHHHTCTTSCEECCCGGGTCHHHHHHHHHHHTTTT
T ss_pred             EeCChHhHHHHHHHHHHCC-CEEEEcC---CCCCCHHHHHHHHHHHHhCCCCeEEEecccccCHHHHHHHHHHHcCCC
Confidence            9999877888888888865 4444421   1111111   11    123 444433222  34568889999999887

>2d1y_A Hypothetical protein TT0321; strucrtural genomics, thermus thermophilus HB8, structural genomics, NPPSFA; HET: NAD; 1.65A {Thermus thermophilus} SCOP: c.2.1.2

Probab=96.71  E-value=0.012  Score=50.16  Aligned_cols=80  Identities=24%  Similarity=0.280  Sum_probs=51.2

Q ss_pred             CCCEEEEEcC-CHHHHHHHHHHHHHCCCCeEEEEeCChhHHHHHHHcCCCEEEeCCCC-cccHHHHHHHHHHHhCCCceE
Q 017868          181 PETNVLIMGA-GPIGLVTMLGAPRAFGAPRIVIVDVDDYRLSVAKEIGADNIVKVSTN-LQDIAEEVEKIQKAMGTGIDV  258 (365)
Q Consensus       181 ~g~~vlI~G~-g~~G~~ai~~l~~~~g~~~vi~v~~~~~~~~~~~~~g~~~~~~~~~~-~~~~~~~i~~~~~~~~~~~d~  258 (365)
                      .+.++||+|+ |++|.++++.++ ..|+ .|+.+++++++.+..+++.. ..+..+-. .+++...+++..+.. +++|+
T Consensus         5 ~~k~vlVTGas~gIG~~ia~~l~-~~G~-~V~~~~r~~~~~~~~~~~~~-~~~~~D~~~~~~~~~~~~~~~~~~-g~iD~   80 (256)
T 2d1y_A            5 AGKGVLVTGGARGIGRAIAQAFA-REGA-LVALCDLRPEGKEVAEAIGG-AFFQVDLEDERERVRFVEEAAYAL-GRVDV   80 (256)
T ss_dssp             TTCEEEEETTTSHHHHHHHHHHH-HTTC-EEEEEESSTTHHHHHHHHTC-EEEECCTTCHHHHHHHHHHHHHHH-SCCCE
T ss_pred             CCCEEEEeCCCCHHHHHHHHHHH-HCCC-EEEEEeCChhHHHHHHHhhC-CEEEeeCCCHHHHHHHHHHHHHHc-CCCCE
Confidence            4678999987 999999999554 5698 57777777666445555542 33333322 233334444433322 57999


Q ss_pred             EEeCCC
Q 017868          259 SFDCAG  264 (365)
Q Consensus       259 vid~~g  264 (365)
                      +|.++|
T Consensus        81 lv~~Ag   86 (256)
T 2d1y_A           81 LVNNAA   86 (256)
T ss_dssp             EEECCC
T ss_pred             EEECCC
Confidence            999887

>1nvm_B Acetaldehyde dehydrogenase (acylating), 4-hydroxy-2-oxovalerate aldolase; sequestered tunnel, substrate channeling; HET: NAD; 1.70A {Pseudomonas SP} SCOP: c.2.1.3 d.81.1.1

Probab=96.69  E-value=0.0097  Score=52.50  Aligned_cols=94  Identities=21%  Similarity=0.225  Sum_probs=64.6

Q ss_pred             CEEEEEcCCHHHHHHHHHHHH-HCCCCeEEEEeCChhH--HHHHHHcCCCEEEeCCCCcccHHHHHHHHHHHhCCCceEE
Q 017868          183 TNVLIMGAGPIGLVTMLGAPR-AFGAPRIVIVDVDDYR--LSVAKEIGADNIVKVSTNLQDIAEEVEKIQKAMGTGIDVS  259 (365)
Q Consensus       183 ~~vlI~G~g~~G~~ai~~l~~-~~g~~~vi~v~~~~~~--~~~~~~~g~~~~~~~~~~~~~~~~~i~~~~~~~~~~~d~v  259 (365)
                      -+|.|+|+|.+|...+..+.+ ..+.+.+.++++++++  .++++++|.....      .++.+.+.+   +.+.++|+|
T Consensus         5 irVaIIG~G~iG~~~~~~l~~~~~~~elvav~d~~~~~~~~~~a~~~g~~~~~------~~~e~ll~~---~~~~~iDvV   75 (312)
T 1nvm_B            5 LKVAIIGSGNIGTDLMIKVLRNAKYLEMGAMVGIDAASDGLARAQRMGVTTTY------AGVEGLIKL---PEFADIDFV   75 (312)
T ss_dssp             EEEEEECCSHHHHHHHHHHHHHCSSEEEEEEECSCTTCHHHHHHHHTTCCEES------SHHHHHHHS---GGGGGEEEE
T ss_pred             CEEEEEcCcHHHHHHHHHHHhhCcCeEEEEEEeCChhhhHHHHHHHcCCCccc------CCHHHHHhc---cCCCCCcEE
Confidence            478999999999988885545 5567666667777665  5677888875311      122222211   112579999


Q ss_pred             EeCCCCHHHHHHHHHhccc--CCEEEEE
Q 017868          260 FDCAGLNKTMSTALGATCA--GGKVCLV  285 (365)
Q Consensus       260 id~~g~~~~~~~~~~~l~~--~G~~~~~  285 (365)
                      ++|++...+...+..++..  +.+++..
T Consensus        76 ~~atp~~~h~~~a~~al~a~~Gk~Vi~e  103 (312)
T 1nvm_B           76 FDATSASAHVQNEALLRQAKPGIRLIDL  103 (312)
T ss_dssp             EECSCHHHHHHHHHHHHHHCTTCEEEEC
T ss_pred             EECCChHHHHHHHHHHHHhCCCCEEEEc
Confidence            9999977777788888887  7777664

>3gem_A Short chain dehydrogenase; structural genomics, APC65077, oxidoreductase, PSI-2, protein structure initiative; 1.83A {Pseudomonas syringae PV}

Probab=96.67  E-value=0.0083  Score=51.50  Aligned_cols=80  Identities=16%  Similarity=0.202  Sum_probs=50.2

Q ss_pred             CCCEEEEEcC-CHHHHHHHHHHHHHCCCCeEEEEeCChhH-HHHHHHcCCCEEEeCCC-CcccHHHHHHHHHHHhCCCce
Q 017868          181 PETNVLIMGA-GPIGLVTMLGAPRAFGAPRIVIVDVDDYR-LSVAKEIGADNIVKVST-NLQDIAEEVEKIQKAMGTGID  257 (365)
Q Consensus       181 ~g~~vlI~G~-g~~G~~ai~~l~~~~g~~~vi~v~~~~~~-~~~~~~~g~~~~~~~~~-~~~~~~~~i~~~~~~~~~~~d  257 (365)
                      .+.++||+|+ +++|.++++.++ ..|++ |+.+++++++ .+.+++.++.. +..+- +.+++.+.++++.+. -+++|
T Consensus        26 ~~k~vlVTGas~gIG~aia~~l~-~~G~~-V~~~~r~~~~~~~~~~~~~~~~-~~~Dv~~~~~v~~~~~~~~~~-~g~iD  101 (260)
T 3gem_A           26 SSAPILITGASQRVGLHCALRLL-EHGHR-VIISYRTEHASVTELRQAGAVA-LYGDFSCETGIMAFIDLLKTQ-TSSLR  101 (260)
T ss_dssp             -CCCEEESSTTSHHHHHHHHHHH-HTTCC-EEEEESSCCHHHHHHHHHTCEE-EECCTTSHHHHHHHHHHHHHH-CSCCS
T ss_pred             CCCEEEEECCCCHHHHHHHHHHH-HCCCE-EEEEeCChHHHHHHHHhcCCeE-EECCCCCHHHHHHHHHHHHHh-cCCCC
Confidence            4678999987 999999999554 55995 6666666544 44556666533 32222 223333344444332 35899


Q ss_pred             EEEeCCC
Q 017868          258 VSFDCAG  264 (365)
Q Consensus       258 ~vid~~g  264 (365)
                      ++|.++|
T Consensus       102 ~lv~nAg  108 (260)
T 3gem_A          102 AVVHNAS  108 (260)
T ss_dssp             EEEECCC
T ss_pred             EEEECCC
Confidence            9999887

>3u5t_A 3-oxoacyl-[acyl-carrier-protein] reductase; structural genomics, PSI-biology, NEW YORK structural genomi research consortium, nysgrc; 2.40A {Sinorhizobium meliloti}

Probab=96.67  E-value=0.018  Score=49.53  Aligned_cols=105  Identities=15%  Similarity=0.193  Sum_probs=60.7

Q ss_pred             CCCEEEEEcC-CHHHHHHHHHHHHHCCCCeEEEEeCChhHHHH----HHHcCCCE-EEeCCC-CcccHHHHHHHHHHHhC
Q 017868          181 PETNVLIMGA-GPIGLVTMLGAPRAFGAPRIVIVDVDDYRLSV----AKEIGADN-IVKVST-NLQDIAEEVEKIQKAMG  253 (365)
Q Consensus       181 ~g~~vlI~G~-g~~G~~ai~~l~~~~g~~~vi~v~~~~~~~~~----~~~~g~~~-~~~~~~-~~~~~~~~i~~~~~~~~  253 (365)
                      .+.++||+|+ +++|.++++.+++. |+++++...+++++.+.    ++..+... .+..+- +.++..+.++++.+. -
T Consensus        26 ~~k~~lVTGas~GIG~aia~~la~~-G~~Vv~~~~~~~~~~~~~~~~~~~~~~~~~~~~~Dl~~~~~v~~~~~~~~~~-~  103 (267)
T 3u5t_A           26 TNKVAIVTGASRGIGAAIAARLASD-GFTVVINYAGKAAAAEEVAGKIEAAGGKALTAQADVSDPAAVRRLFATAEEA-F  103 (267)
T ss_dssp             -CCEEEEESCSSHHHHHHHHHHHHH-TCEEEEEESSCSHHHHHHHHHHHHTTCCEEEEECCTTCHHHHHHHHHHHHHH-H
T ss_pred             CCCEEEEeCCCCHHHHHHHHHHHHC-CCEEEEEcCCCHHHHHHHHHHHHhcCCeEEEEEcCCCCHHHHHHHHHHHHHH-c
Confidence            5789999987 99999999956554 99544444555544332    23344332 222222 223333344444332 2


Q ss_pred             CCceEEEeCCCCH----------H---------------HHHHHHHhcccCCEEEEEcc
Q 017868          254 TGIDVSFDCAGLN----------K---------------TMSTALGATCAGGKVCLVGM  287 (365)
Q Consensus       254 ~~~d~vid~~g~~----------~---------------~~~~~~~~l~~~G~~~~~g~  287 (365)
                      +++|++|.++|..          +               ....++..++.+|+++.++.
T Consensus       104 g~iD~lvnnAG~~~~~~~~~~~~~~~~~~~~vN~~g~~~~~~~~~~~~~~~g~iv~isS  162 (267)
T 3u5t_A          104 GGVDVLVNNAGIMPLTTIAETGDAVFDRVIAVNLKGTFNTLREAAQRLRVGGRIINMST  162 (267)
T ss_dssp             SCEEEEEECCCCCCCCCGGGCCHHHHHHHHHHHHHHHHHHHHHHHHHEEEEEEEEEECC
T ss_pred             CCCCEEEECCCCCCCCChhhCCHHHHHHHHHHHHHHHHHHHHHHHHHHhhCCeEEEEeC
Confidence            5899999998731          1               12234555666788888864

>3l6e_A Oxidoreductase, short-chain dehydrogenase/reducta; structural genomics, PSI-2, protein structure initiative; 2.30A {Aeromonas hydrophila subsp} SCOP: c.2.1.0

Probab=96.67  E-value=0.01  Score=50.00  Aligned_cols=81  Identities=16%  Similarity=0.243  Sum_probs=51.0

Q ss_pred             CCEEEEEcC-CHHHHHHHHHHHHHCCCCeEEEEeCChhHHHHH-HHcCCC-EEEeCCC-CcccHHHHHHHHHHHhCCCce
Q 017868          182 ETNVLIMGA-GPIGLVTMLGAPRAFGAPRIVIVDVDDYRLSVA-KEIGAD-NIVKVST-NLQDIAEEVEKIQKAMGTGID  257 (365)
Q Consensus       182 g~~vlI~G~-g~~G~~ai~~l~~~~g~~~vi~v~~~~~~~~~~-~~~g~~-~~~~~~~-~~~~~~~~i~~~~~~~~~~~d  257 (365)
                      +.++||+|+ +++|.+++..++ ..|+ +|+.+++++++.+.+ ++++.. ..+..+- +.++....++++.+. .+++|
T Consensus         3 ~k~vlVTGas~GIG~a~a~~l~-~~G~-~V~~~~r~~~~~~~~~~~~~~~~~~~~~D~~~~~~v~~~~~~~~~~-~g~id   79 (235)
T 3l6e_A            3 LGHIIVTGAGSGLGRALTIGLV-ERGH-QVSMMGRRYQRLQQQELLLGNAVIGIVADLAHHEDVDVAFAAAVEW-GGLPE   79 (235)
T ss_dssp             CCEEEEESTTSHHHHHHHHHHH-HTTC-EEEEEESCHHHHHHHHHHHGGGEEEEECCTTSHHHHHHHHHHHHHH-HCSCS
T ss_pred             CCEEEEECCCCHHHHHHHHHHH-HCCC-EEEEEECCHHHHHHHHHHhcCCceEEECCCCCHHHHHHHHHHHHHh-cCCCc
Confidence            568999987 999999999555 5699 577888888776543 444322 1222222 223343444444333 25899


Q ss_pred             EEEeCCCC
Q 017868          258 VSFDCAGL  265 (365)
Q Consensus       258 ~vid~~g~  265 (365)
                      ++|.++|.
T Consensus        80 ~lvnnAg~   87 (235)
T 3l6e_A           80 LVLHCAGT   87 (235)
T ss_dssp             EEEEECCC
T ss_pred             EEEECCCC
Confidence            99998873

>4fs3_A Enoyl-[acyl-carrier-protein] reductase [NADPH] FA; rossmann fold, short chain dehydrogenase, NADPH binding, oxidoreductase; HET: 0WD 0WE; 1.80A {Staphylococcus aureus subsp} PDB: 3gr6_A* 3gns_A* 4all_A* 3gnt_A 4alk_A* 4alj_A* 4ali_A* 4alm_A 4aln_A

Probab=96.66  E-value=0.033  Score=47.53  Aligned_cols=81  Identities=15%  Similarity=0.258  Sum_probs=50.5

Q ss_pred             CCCEEEEEcC-C--HHHHHHHHHHHHHCCCCeEEEEeCChhHHHH----HHHcCCC--EEEeCC-CCcccHHHHHHHHHH
Q 017868          181 PETNVLIMGA-G--PIGLVTMLGAPRAFGAPRIVIVDVDDYRLSV----AKEIGAD--NIVKVS-TNLQDIAEEVEKIQK  250 (365)
Q Consensus       181 ~g~~vlI~G~-g--~~G~~ai~~l~~~~g~~~vi~v~~~~~~~~~----~~~~g~~--~~~~~~-~~~~~~~~~i~~~~~  250 (365)
                      +|+++||+|+ |  ++|.++++.++ ..|+ +|+.+++++++.+.    +++++..  ..+..+ .+.++..+.+.+..+
T Consensus         5 ~gK~alVTGaa~~~GIG~aiA~~la-~~Ga-~Vvi~~r~~~~~~~~~~~~~~~~~~~~~~~~~Dv~~~~~v~~~~~~~~~   82 (256)
T 4fs3_A            5 ENKTYVIMGIANKRSIAFGVAKVLD-QLGA-KLVFTYRKERSRKELEKLLEQLNQPEAHLYQIDVQSDEEVINGFEQIGK   82 (256)
T ss_dssp             TTCEEEEECCCSTTCHHHHHHHHHH-HTTC-EEEEEESSGGGHHHHHHHHGGGTCSSCEEEECCTTCHHHHHHHHHHHHH
T ss_pred             CCCEEEEECCCCCchHHHHHHHHHH-HCCC-EEEEEECCHHHHHHHHHHHHhcCCCcEEEEEccCCCHHHHHHHHHHHHH
Confidence            5789999996 4  79999999554 6699 57777787765433    3344432  222222 223344444444443


Q ss_pred             HhCCCceEEEeCCC
Q 017868          251 AMGTGIDVSFDCAG  264 (365)
Q Consensus       251 ~~~~~~d~vid~~g  264 (365)
                      .. +++|++++++|
T Consensus        83 ~~-G~iD~lvnnAg   95 (256)
T 4fs3_A           83 DV-GNIDGVYHSIA   95 (256)
T ss_dssp             HH-CCCSEEEECCC
T ss_pred             Hh-CCCCEEEeccc
Confidence            33 58999999877

>2yxe_A Protein-L-isoaspartate O-methyltransferase; rossman-type fold, alpha/beta/alpha sandwich structure, STRU genomics, NPPSFA; 2.00A {Methanocaldococcus jannaschii}

Probab=96.63  E-value=0.0036  Score=51.88  Aligned_cols=104  Identities=20%  Similarity=0.242  Sum_probs=67.8

Q ss_pred             HHHHhcCCCCCCEEEEEcCCHHHHHHHHHHHHHCCC-CeEEEEeCChhHHHHHHH----cCCCEEEeCCCCcccHHHHHH
Q 017868          172 HACRRANIGPETNVLIMGAGPIGLVTMLGAPRAFGA-PRIVIVDVDDYRLSVAKE----IGADNIVKVSTNLQDIAEEVE  246 (365)
Q Consensus       172 ~~~~~~~~~~g~~vlI~G~g~~G~~ai~~l~~~~g~-~~vi~v~~~~~~~~~~~~----~g~~~~~~~~~~~~~~~~~i~  246 (365)
                      ..++...+.++++||..|+|. |..+.. +++..+. ..+++++.+++..+.+++    .+...+.....   +....+.
T Consensus        68 ~~~~~~~~~~~~~vLdiG~G~-G~~~~~-l~~~~~~~~~v~~vD~~~~~~~~a~~~~~~~~~~~v~~~~~---d~~~~~~  142 (215)
T 2yxe_A           68 MMCELLDLKPGMKVLEIGTGC-GYHAAV-TAEIVGEDGLVVSIERIPELAEKAERTLRKLGYDNVIVIVG---DGTLGYE  142 (215)
T ss_dssp             HHHHHTTCCTTCEEEEECCTT-SHHHHH-HHHHHCTTSEEEEEESCHHHHHHHHHHHHHHTCTTEEEEES---CGGGCCG
T ss_pred             HHHHhhCCCCCCEEEEECCCc-cHHHHH-HHHHhCCCCEEEEEeCCHHHHHHHHHHHHHcCCCCeEEEEC---CcccCCC
Confidence            344566788999999999874 777777 7666652 379999999987776654    34332211111   1111010


Q ss_pred             HHHHHhCCCceEEEeCCCCHHHHHHHHHhcccCCEEEEE
Q 017868          247 KIQKAMGTGIDVSFDCAGLNKTMSTALGATCAGGKVCLV  285 (365)
Q Consensus       247 ~~~~~~~~~~d~vid~~g~~~~~~~~~~~l~~~G~~~~~  285 (365)
                           ....+|+|+...........+.+.|+++|++++.
T Consensus       143 -----~~~~fD~v~~~~~~~~~~~~~~~~L~pgG~lv~~  176 (215)
T 2yxe_A          143 -----PLAPYDRIYTTAAGPKIPEPLIRQLKDGGKLLMP  176 (215)
T ss_dssp             -----GGCCEEEEEESSBBSSCCHHHHHTEEEEEEEEEE
T ss_pred             -----CCCCeeEEEECCchHHHHHHHHHHcCCCcEEEEE
Confidence                 1357999998665433445788899999998876

>3v2g_A 3-oxoacyl-[acyl-carrier-protein] reductase; structural genomics, PSI-biology, protein structure initiati nysgrc; 2.30A {Sinorhizobium meliloti}

Probab=96.62  E-value=0.044  Score=47.20  Aligned_cols=104  Identities=16%  Similarity=0.311  Sum_probs=61.7

Q ss_pred             CCCEEEEEcC-CHHHHHHHHHHHHHCCCCeEEEE-eCChhHHH----HHHHcCCCE-EEeCCC-CcccHHHHHHHHHHHh
Q 017868          181 PETNVLIMGA-GPIGLVTMLGAPRAFGAPRIVIV-DVDDYRLS----VAKEIGADN-IVKVST-NLQDIAEEVEKIQKAM  252 (365)
Q Consensus       181 ~g~~vlI~G~-g~~G~~ai~~l~~~~g~~~vi~v-~~~~~~~~----~~~~~g~~~-~~~~~~-~~~~~~~~i~~~~~~~  252 (365)
                      .++++||+|+ +++|.++++.++ ..|++ |+.+ .++.++.+    .+++.+... .+..+- +.+++.+.++++.+..
T Consensus        30 ~gk~~lVTGas~GIG~aia~~la-~~G~~-V~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~Dv~d~~~v~~~~~~~~~~~  107 (271)
T 3v2g_A           30 AGKTAFVTGGSRGIGAAIAKRLA-LEGAA-VALTYVNAAERAQAVVSEIEQAGGRAVAIRADNRDAEAIEQAIRETVEAL  107 (271)
T ss_dssp             TTCEEEEETTTSHHHHHHHHHHH-HTTCE-EEEEESSCHHHHHHHHHHHHHTTCCEEEEECCTTCHHHHHHHHHHHHHHH
T ss_pred             CCCEEEEeCCCcHHHHHHHHHHH-HCCCE-EEEEeCCCHHHHHHHHHHHHhcCCcEEEEECCCCCHHHHHHHHHHHHHHc
Confidence            5789999987 999999999555 56995 5555 44444433    233345432 222222 2233444444444333


Q ss_pred             CCCceEEEeCCCCH----------H---------------HHHHHHHhcccCCEEEEEcc
Q 017868          253 GTGIDVSFDCAGLN----------K---------------TMSTALGATCAGGKVCLVGM  287 (365)
Q Consensus       253 ~~~~d~vid~~g~~----------~---------------~~~~~~~~l~~~G~~~~~g~  287 (365)
                       +++|++|.++|..          +               ....+...+..+|+++.++.
T Consensus       108 -g~iD~lvnnAg~~~~~~~~~~~~~~~~~~~~vN~~g~~~~~~~~~~~m~~~g~iv~isS  166 (271)
T 3v2g_A          108 -GGLDILVNSAGIWHSAPLEETTVADFDEVMAVNFRAPFVAIRSASRHLGDGGRIITIGS  166 (271)
T ss_dssp             -SCCCEEEECCCCCCCCCGGGCCHHHHHHHHHHHTHHHHHHHHHHHHHCCTTCEEEEECC
T ss_pred             -CCCcEEEECCCCCCCCChhhCCHHHHHHHHHHHhHHHHHHHHHHHHHHhcCCEEEEEeC
Confidence             4899999988731          1               22234556667899998864

>2ekp_A 2-deoxy-D-gluconate 3-dehydrogenase; structural genomics, NPPSFA, nation project on protein structural and functional analyses; HET: NAD; 1.15A {Thermus thermophilus} PDB: 1x1e_A* 2ekq_A

Probab=96.61  E-value=0.021  Score=48.11  Aligned_cols=77  Identities=23%  Similarity=0.283  Sum_probs=50.6

Q ss_pred             CCEEEEEcC-CHHHHHHHHHHHHHCCCCeEEEEeCChhHHHHHHHcCCCEEEeCCCCcccHHHHHHHHHHHhCCCceEEE
Q 017868          182 ETNVLIMGA-GPIGLVTMLGAPRAFGAPRIVIVDVDDYRLSVAKEIGADNIVKVSTNLQDIAEEVEKIQKAMGTGIDVSF  260 (365)
Q Consensus       182 g~~vlI~G~-g~~G~~ai~~l~~~~g~~~vi~v~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~i~~~~~~~~~~~d~vi  260 (365)
                      +.++||+|+ |++|.++++.++ ..|+ .|+.+++++++  ..+++++ ..+..+-.+++..+.+++..+.. +++|+++
T Consensus         2 ~k~vlVTGas~giG~~~a~~l~-~~G~-~V~~~~r~~~~--~~~~~~~-~~~~~D~~~~~~~~~~~~~~~~~-g~id~lv   75 (239)
T 2ekp_A            2 ERKALVTGGSRGIGRAIAEALV-ARGY-RVAIASRNPEE--AAQSLGA-VPLPTDLEKDDPKGLVKRALEAL-GGLHVLV   75 (239)
T ss_dssp             CCEEEEETTTSHHHHHHHHHHH-HTTC-EEEEEESSCHH--HHHHHTC-EEEECCTTTSCHHHHHHHHHHHH-TSCCEEE
T ss_pred             CCEEEEeCCCcHHHHHHHHHHH-HCCC-EEEEEeCCHHH--HHHhhCc-EEEecCCchHHHHHHHHHHHHHc-CCCCEEE
Confidence            568999987 999999999554 5698 57777777665  3444563 23333322255555555544332 4799999


Q ss_pred             eCCC
Q 017868          261 DCAG  264 (365)
Q Consensus       261 d~~g  264 (365)
                      .++|
T Consensus        76 ~~Ag   79 (239)
T 2ekp_A           76 HAAA   79 (239)
T ss_dssp             ECCC
T ss_pred             ECCC
Confidence            9887

>3is3_A 17BETA-hydroxysteroid dehydrogenase; short chain dehydrogenase/REDU SDR, fungi, oxidoreductase; HET: GOL; 1.48A {Cochliobolus lunatus} PDB: 3qwf_A* 3qwh_A* 3qwi_A* 3itd_A

Probab=96.60  E-value=0.042  Score=47.24  Aligned_cols=106  Identities=17%  Similarity=0.275  Sum_probs=62.5

Q ss_pred             CCCEEEEEcC-CHHHHHHHHHHHHHCCCCeEEEEeCChhHHH----HHHHcCCCE-EEeCCC-CcccHHHHHHHHHHHhC
Q 017868          181 PETNVLIMGA-GPIGLVTMLGAPRAFGAPRIVIVDVDDYRLS----VAKEIGADN-IVKVST-NLQDIAEEVEKIQKAMG  253 (365)
Q Consensus       181 ~g~~vlI~G~-g~~G~~ai~~l~~~~g~~~vi~v~~~~~~~~----~~~~~g~~~-~~~~~~-~~~~~~~~i~~~~~~~~  253 (365)
                      .|.++||+|+ +++|.++++.++ ..|+++++...+++++.+    .+++.+... .+..+- +.++..+.+++..+.. 
T Consensus        17 ~~k~~lVTGas~gIG~aia~~l~-~~G~~V~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~Dv~~~~~v~~~~~~~~~~~-   94 (270)
T 3is3_A           17 DGKVALVTGSGRGIGAAVAVHLG-RLGAKVVVNYANSTKDAEKVVSEIKALGSDAIAIKADIRQVPEIVKLFDQAVAHF-   94 (270)
T ss_dssp             TTCEEEESCTTSHHHHHHHHHHH-HTTCEEEEEESSCHHHHHHHHHHHHHTTCCEEEEECCTTSHHHHHHHHHHHHHHH-
T ss_pred             CCCEEEEECCCchHHHHHHHHHH-HCCCEEEEEcCCCHHHHHHHHHHHHhcCCcEEEEEcCCCCHHHHHHHHHHHHHHc-
Confidence            5788999987 999999999554 569954443444444433    233445432 222222 2233444444443332 


Q ss_pred             CCceEEEeCCCCH----------H---------------HHHHHHHhcccCCEEEEEccC
Q 017868          254 TGIDVSFDCAGLN----------K---------------TMSTALGATCAGGKVCLVGMG  288 (365)
Q Consensus       254 ~~~d~vid~~g~~----------~---------------~~~~~~~~l~~~G~~~~~g~~  288 (365)
                      +++|++|.++|..          +               ..+.++..+..+|+++.++..
T Consensus        95 g~id~lvnnAg~~~~~~~~~~~~~~~~~~~~~N~~g~~~~~~~~~~~~~~~g~iv~isS~  154 (270)
T 3is3_A           95 GHLDIAVSNSGVVSFGHLKDVTEEEFDRVFSLNTRGQFFVAREAYRHLTEGGRIVLTSSN  154 (270)
T ss_dssp             SCCCEEECCCCCCCCCCGGGCCHHHHHHHHHHHTHHHHHHHHHHHHHCCTTCEEEEECCT
T ss_pred             CCCCEEEECCCCCCCCCcccCCHHHHHHHHHHHhHHHHHHHHHHHHHHhcCCeEEEEeCc
Confidence            4799999988731          1               223455567778999988753

>3ew7_A LMO0794 protein; Q8Y8U8_lismo, putative NAD-dependent epimerase/dehydratase, LMR162, NESG, structural genomics, PSI-2; 2.73A {Listeria monocytogenes}

Probab=96.58  E-value=0.033  Score=45.97  Aligned_cols=91  Identities=13%  Similarity=0.242  Sum_probs=57.3

Q ss_pred             EEEEEcC-CHHHHHHHHHHHHHCCCCeEEEEeCChhHHHHHHHcCCCEEEeCCCCcccHHHHHHHHHHHhCCCceEEEeC
Q 017868          184 NVLIMGA-GPIGLVTMLGAPRAFGAPRIVIVDVDDYRLSVAKEIGADNIVKVSTNLQDIAEEVEKIQKAMGTGIDVSFDC  262 (365)
Q Consensus       184 ~vlI~G~-g~~G~~ai~~l~~~~g~~~vi~v~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~i~~~~~~~~~~~d~vid~  262 (365)
                      +|||+|+ |.+|..+++ .+...|. .|+++++++++.+.+. -++. .+..+-.+.+.    +.+     .++|+||.+
T Consensus         2 kvlVtGatG~iG~~l~~-~L~~~g~-~V~~~~R~~~~~~~~~-~~~~-~~~~D~~d~~~----~~~-----~~~d~vi~~   68 (221)
T 3ew7_A            2 KIGIIGATGRAGSRILE-EAKNRGH-EVTAIVRNAGKITQTH-KDIN-ILQKDIFDLTL----SDL-----SDQNVVVDA   68 (221)
T ss_dssp             EEEEETTTSHHHHHHHH-HHHHTTC-EEEEEESCSHHHHHHC-SSSE-EEECCGGGCCH----HHH-----TTCSEEEEC
T ss_pred             eEEEEcCCchhHHHHHH-HHHhCCC-EEEEEEcCchhhhhcc-CCCe-EEeccccChhh----hhh-----cCCCEEEEC
Confidence            6899997 999999999 4455688 6777778877765443 2332 33322222222    222     579999999


Q ss_pred             CCCH--------HHHHHHHHhcccC--CEEEEEcc
Q 017868          263 AGLN--------KTMSTALGATCAG--GKVCLVGM  287 (365)
Q Consensus       263 ~g~~--------~~~~~~~~~l~~~--G~~~~~g~  287 (365)
                      +|..        ......++.+...  ++++.++.
T Consensus        69 ag~~~~~~~~~~~~~~~l~~a~~~~~~~~~v~~SS  103 (221)
T 3ew7_A           69 YGISPDEAEKHVTSLDHLISVLNGTVSPRLLVVGG  103 (221)
T ss_dssp             CCSSTTTTTSHHHHHHHHHHHHCSCCSSEEEEECC
T ss_pred             CcCCccccchHHHHHHHHHHHHHhcCCceEEEEec
Confidence            9853        2334555665543  67887754

>3nyw_A Putative oxidoreductase; fatty acid synthesis,3-oxoacyl-[ACP] reductase, NADP+ bindin rossman fold, PSI-II, nysgxrc; 2.16A {Bacteroides thetaiotaomicron}

Probab=96.57  E-value=0.019  Score=48.85  Aligned_cols=82  Identities=21%  Similarity=0.322  Sum_probs=51.1

Q ss_pred             CCCEEEEEcC-CHHHHHHHHHHHHHCCCCeEEEEeCChhHHHHH-HHc-----C--CCEEEeCCC-CcccHHHHHHHHHH
Q 017868          181 PETNVLIMGA-GPIGLVTMLGAPRAFGAPRIVIVDVDDYRLSVA-KEI-----G--ADNIVKVST-NLQDIAEEVEKIQK  250 (365)
Q Consensus       181 ~g~~vlI~G~-g~~G~~ai~~l~~~~g~~~vi~v~~~~~~~~~~-~~~-----g--~~~~~~~~~-~~~~~~~~i~~~~~  250 (365)
                      .+.++||+|+ +++|.++++.+++ .|+ +|+.+++++++.+.+ +++     +  -...+..+- +.++..+.++++.+
T Consensus         6 ~~k~~lVTGas~GIG~aia~~l~~-~G~-~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~~~Dv~~~~~v~~~~~~~~~   83 (250)
T 3nyw_A            6 QKGLAIITGASQGIGAVIAAGLAT-DGY-RVVLIARSKQNLEKVHDEIMRSNKHVQEPIVLPLDITDCTKADTEIKDIHQ   83 (250)
T ss_dssp             CCCEEEEESTTSHHHHHHHHHHHH-HTC-EEEEEESCHHHHHHHHHHHHHHCTTSCCCEEEECCTTCHHHHHHHHHHHHH
T ss_pred             CCCEEEEECCCcHHHHHHHHHHHH-CCC-EEEEEECCHHHHHHHHHHHHHhccccCcceEEeccCCCHHHHHHHHHHHHH
Confidence            4678999987 9999999995655 499 677788887765433 222     2  122222222 22333444444433


Q ss_pred             HhCCCceEEEeCCCC
Q 017868          251 AMGTGIDVSFDCAGL  265 (365)
Q Consensus       251 ~~~~~~d~vid~~g~  265 (365)
                      . .+++|++|.++|.
T Consensus        84 ~-~g~iD~lvnnAg~   97 (250)
T 3nyw_A           84 K-YGAVDILVNAAAM   97 (250)
T ss_dssp             H-HCCEEEEEECCCC
T ss_pred             h-cCCCCEEEECCCc
Confidence            3 2589999999884

>3e8x_A Putative NAD-dependent epimerase/dehydratase; structural genomics, APC7755, NADP, P protein structure initiative; HET: MSE NAP; 2.10A {Bacillus halodurans}

Probab=96.57  E-value=0.0099  Score=50.00  Aligned_cols=74  Identities=23%  Similarity=0.263  Sum_probs=50.6

Q ss_pred             CCCEEEEEcC-CHHHHHHHHHHHHHCCCCeEEEEeCChhHHHHHHHcCCCEEEeCCCCcccHHHHHHHHHHHhCCCceEE
Q 017868          181 PETNVLIMGA-GPIGLVTMLGAPRAFGAPRIVIVDVDDYRLSVAKEIGADNIVKVSTNLQDIAEEVEKIQKAMGTGIDVS  259 (365)
Q Consensus       181 ~g~~vlI~G~-g~~G~~ai~~l~~~~g~~~vi~v~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~i~~~~~~~~~~~d~v  259 (365)
                      .+.+|||+|+ |.+|.+++..+ ...|+ .|+++++++++.+.+...++...+..+-. +++    .+.    -.++|+|
T Consensus        20 ~~~~ilVtGatG~iG~~l~~~L-~~~G~-~V~~~~R~~~~~~~~~~~~~~~~~~~Dl~-~~~----~~~----~~~~D~v   88 (236)
T 3e8x_A           20 QGMRVLVVGANGKVARYLLSEL-KNKGH-EPVAMVRNEEQGPELRERGASDIVVANLE-EDF----SHA----FASIDAV   88 (236)
T ss_dssp             -CCEEEEETTTSHHHHHHHHHH-HHTTC-EEEEEESSGGGHHHHHHTTCSEEEECCTT-SCC----GGG----GTTCSEE
T ss_pred             CCCeEEEECCCChHHHHHHHHH-HhCCC-eEEEEECChHHHHHHHhCCCceEEEcccH-HHH----HHH----HcCCCEE
Confidence            5789999997 99999999945 45698 67888888888777766666233332221 222    211    2479999


Q ss_pred             EeCCCC
Q 017868          260 FDCAGL  265 (365)
Q Consensus       260 id~~g~  265 (365)
                      |.++|.
T Consensus        89 i~~ag~   94 (236)
T 3e8x_A           89 VFAAGS   94 (236)
T ss_dssp             EECCCC
T ss_pred             EECCCC
Confidence            999884

>3ged_A Short-chain dehydrogenase/reductase SDR; SCOR, rossmann fold, oxidoreductase; 1.70A {Clostridium thermocellum atcc 27405} PDB: 3geg_A*

Probab=96.56  E-value=0.017  Score=49.12  Aligned_cols=79  Identities=19%  Similarity=0.220  Sum_probs=51.8

Q ss_pred             CEEEEEcC-CHHHHHHHHHHHHHCCCCeEEEEeCChhHHHHHHHcCCC-EEEeCCC-CcccHHHHHHHHHHHhCCCceEE
Q 017868          183 TNVLIMGA-GPIGLVTMLGAPRAFGAPRIVIVDVDDYRLSVAKEIGAD-NIVKVST-NLQDIAEEVEKIQKAMGTGIDVS  259 (365)
Q Consensus       183 ~~vlI~G~-g~~G~~ai~~l~~~~g~~~vi~v~~~~~~~~~~~~~g~~-~~~~~~~-~~~~~~~~i~~~~~~~~~~~d~v  259 (365)
                      ++|||+|+ +++|.++++.++ ..|+ +|+.+++++++.+.+.+-+.. ..+..+- +.++..+.+.+..+.. +++|++
T Consensus         3 K~vlVTGas~GIG~aia~~la-~~Ga-~V~~~~~~~~~~~~~~~~~~~~~~~~~Dv~~~~~v~~~v~~~~~~~-g~iDiL   79 (247)
T 3ged_A            3 RGVIVTGGGHGIGKQICLDFL-EAGD-KVCFIDIDEKRSADFAKERPNLFYFHGDVADPLTLKKFVEYAMEKL-QRIDVL   79 (247)
T ss_dssp             CEEEEESTTSHHHHHHHHHHH-HTTC-EEEEEESCHHHHHHHHTTCTTEEEEECCTTSHHHHHHHHHHHHHHH-SCCCEE
T ss_pred             CEEEEecCCCHHHHHHHHHHH-HCCC-EEEEEeCCHHHHHHHHHhcCCEEEEEecCCCHHHHHHHHHHHHHHc-CCCCEE
Confidence            68999987 999999999554 5699 678888888877655443332 2222222 2334444444444433 589999


Q ss_pred             EeCCC
Q 017868          260 FDCAG  264 (365)
Q Consensus       260 id~~g  264 (365)
                      ++++|
T Consensus        80 VNNAG   84 (247)
T 3ged_A           80 VNNAC   84 (247)
T ss_dssp             EECCC
T ss_pred             EECCC
Confidence            99887

>2hmt_A YUAA protein; RCK, KTN, KTR, KTRA, ktrab, membrane protein, ION transporter, symporter, transport protein; HET: NAI; 2.20A {Bacillus subtilis} SCOP: c.2.1.9 PDB: 2hms_A* 2hmu_A* 2hmv_A* 2hmw_A* 1lsu_A*

Probab=96.54  E-value=0.0045  Score=47.47  Aligned_cols=77  Identities=13%  Similarity=0.243  Sum_probs=50.7

Q ss_pred             CCCEEEEEcCCHHHHHHHHHHHHHCCCCeEEEEeCChhHHHHHHHcCCCEEEeCCCCcccHHHHHHHHHHHhCCCceEEE
Q 017868          181 PETNVLIMGAGPIGLVTMLGAPRAFGAPRIVIVDVDDYRLSVAKEIGADNIVKVSTNLQDIAEEVEKIQKAMGTGIDVSF  260 (365)
Q Consensus       181 ~g~~vlI~G~g~~G~~ai~~l~~~~g~~~vi~v~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~i~~~~~~~~~~~d~vi  260 (365)
                      ++++|+|+|+|.+|..+++ .+...|.+ |+++++++++.+.+++.+.. .+..+.  .+ .+.+.+.   .-.++|+++
T Consensus         5 ~~~~v~I~G~G~iG~~~a~-~l~~~g~~-v~~~d~~~~~~~~~~~~~~~-~~~~d~--~~-~~~l~~~---~~~~~d~vi   75 (144)
T 2hmt_A            5 KNKQFAVIGLGRFGGSIVK-ELHRMGHE-VLAVDINEEKVNAYASYATH-AVIANA--TE-ENELLSL---GIRNFEYVI   75 (144)
T ss_dssp             -CCSEEEECCSHHHHHHHH-HHHHTTCC-CEEEESCHHHHHTTTTTCSE-EEECCT--TC-HHHHHTT---TGGGCSEEE
T ss_pred             cCCcEEEECCCHHHHHHHH-HHHHCCCE-EEEEeCCHHHHHHHHHhCCE-EEEeCC--CC-HHHHHhc---CCCCCCEEE
Confidence            3568999999999999999 66677884 77778888877766555553 232221  12 1222221   125799999


Q ss_pred             eCCCCH
Q 017868          261 DCAGLN  266 (365)
Q Consensus       261 d~~g~~  266 (365)
                      .+++..
T Consensus        76 ~~~~~~   81 (144)
T 2hmt_A           76 VAIGAN   81 (144)
T ss_dssp             ECCCSC
T ss_pred             ECCCCc
Confidence            999963

>3ak4_A NADH-dependent quinuclidinone reductase; SDR, (R)-3-quinuclidinol, chiral alcohol, oxidoreductase; HET: NAD; 2.00A {Agrobacterium tumefaciens}

Probab=96.54  E-value=0.023  Score=48.65  Aligned_cols=81  Identities=20%  Similarity=0.282  Sum_probs=50.6

Q ss_pred             CCCEEEEEcC-CHHHHHHHHHHHHHCCCCeEEEEeCChhHHHHH-HHcCC-CEEEeCCC-CcccHHHHHHHHHHHhCCCc
Q 017868          181 PETNVLIMGA-GPIGLVTMLGAPRAFGAPRIVIVDVDDYRLSVA-KEIGA-DNIVKVST-NLQDIAEEVEKIQKAMGTGI  256 (365)
Q Consensus       181 ~g~~vlI~G~-g~~G~~ai~~l~~~~g~~~vi~v~~~~~~~~~~-~~~g~-~~~~~~~~-~~~~~~~~i~~~~~~~~~~~  256 (365)
                      .+.++||+|+ |++|.+++..++ ..|+ .|+.+++++++.+.+ +++.. ...+..+- +.+++...+++..+.. +++
T Consensus        11 ~~k~vlVTGas~gIG~~ia~~l~-~~G~-~V~~~~r~~~~~~~~~~~~~~~~~~~~~D~~d~~~v~~~~~~~~~~~-g~i   87 (263)
T 3ak4_A           11 SGRKAIVTGGSKGIGAAIARALD-KAGA-TVAIADLDVMAAQAVVAGLENGGFAVEVDVTKRASVDAAMQKAIDAL-GGF   87 (263)
T ss_dssp             TTCEEEEETTTSHHHHHHHHHHH-HTTC-EEEEEESCHHHHHHHHHTCTTCCEEEECCTTCHHHHHHHHHHHHHHH-TCC
T ss_pred             CCCEEEEeCCCChHHHHHHHHHH-HCCC-EEEEEeCCHHHHHHHHHHHhcCCeEEEEeCCCHHHHHHHHHHHHHHc-CCC
Confidence            4678999987 999999999454 5698 577777887766543 44432 12222222 2233333444433322 479


Q ss_pred             eEEEeCCC
Q 017868          257 DVSFDCAG  264 (365)
Q Consensus       257 d~vid~~g  264 (365)
                      |++|.++|
T Consensus        88 D~lv~~Ag   95 (263)
T 3ak4_A           88 DLLCANAG   95 (263)
T ss_dssp             CEEEECCC
T ss_pred             CEEEECCC
Confidence            99999887

>3p19_A BFPVVD8, putative blue fluorescent protein; rossmann-fold, oxidoreductase; HET: NAP; 2.05A {Vibrio vulnificus}

Probab=96.53  E-value=0.0082  Score=51.70  Aligned_cols=81  Identities=17%  Similarity=0.155  Sum_probs=49.3

Q ss_pred             CCCEEEEEcC-CHHHHHHHHHHHHHCCCCeEEEEeCChhHHHHHHHcCCCEEEeCCC-CcccHHHHHHHHHHHhCCCceE
Q 017868          181 PETNVLIMGA-GPIGLVTMLGAPRAFGAPRIVIVDVDDYRLSVAKEIGADNIVKVST-NLQDIAEEVEKIQKAMGTGIDV  258 (365)
Q Consensus       181 ~g~~vlI~G~-g~~G~~ai~~l~~~~g~~~vi~v~~~~~~~~~~~~~g~~~~~~~~~-~~~~~~~~i~~~~~~~~~~~d~  258 (365)
                      .+.++||+|+ +++|.++++.++ ..|+ +|+.++++.++.+.+..-.. ..+..+- +.+++...+++..+. -+++|+
T Consensus        15 ~~k~vlVTGas~gIG~aia~~l~-~~G~-~V~~~~r~~~~~~~~~~~~~-~~~~~Dv~d~~~v~~~~~~~~~~-~g~iD~   90 (266)
T 3p19_A           15 MKKLVVITGASSGIGEAIARRFS-EEGH-PLLLLARRVERLKALNLPNT-LCAQVDVTDKYTFDTAITRAEKI-YGPADA   90 (266)
T ss_dssp             CCCEEEEESTTSHHHHHHHHHHH-HTTC-CEEEEESCHHHHHTTCCTTE-EEEECCTTCHHHHHHHHHHHHHH-HCSEEE
T ss_pred             CCCEEEEECCCCHHHHHHHHHHH-HCCC-EEEEEECCHHHHHHhhcCCc-eEEEecCCCHHHHHHHHHHHHHH-CCCCCE
Confidence            4678999987 999999999454 5699 47777777766543221111 1222222 223334444444333 258999


Q ss_pred             EEeCCCC
Q 017868          259 SFDCAGL  265 (365)
Q Consensus       259 vid~~g~  265 (365)
                      +|.++|.
T Consensus        91 lvnnAg~   97 (266)
T 3p19_A           91 IVNNAGM   97 (266)
T ss_dssp             EEECCCC
T ss_pred             EEECCCc
Confidence            9999883

>1uls_A Putative 3-oxoacyl-acyl carrier protein reductase; structural genomics, riken structural genomics/proteomics initiative, RSGI; 2.40A {Thermus thermophilus} SCOP: c.2.1.2

Probab=96.51  E-value=0.028  Score=47.61  Aligned_cols=80  Identities=26%  Similarity=0.334  Sum_probs=51.4

Q ss_pred             CCCEEEEEcC-CHHHHHHHHHHHHHCCCCeEEEEeCChhHHHH-HHHcCCCEEEeCCC-CcccHHHHHHHHHHHhCCCce
Q 017868          181 PETNVLIMGA-GPIGLVTMLGAPRAFGAPRIVIVDVDDYRLSV-AKEIGADNIVKVST-NLQDIAEEVEKIQKAMGTGID  257 (365)
Q Consensus       181 ~g~~vlI~G~-g~~G~~ai~~l~~~~g~~~vi~v~~~~~~~~~-~~~~g~~~~~~~~~-~~~~~~~~i~~~~~~~~~~~d  257 (365)
                      .+.++||+|+ |++|.++++.++ ..|+ .|+.+++++++.+. .+++++ ..+..+- +.+++.+.+++..+.. +++|
T Consensus         4 ~~k~vlVTGas~giG~~ia~~l~-~~G~-~V~~~~r~~~~~~~~~~~~~~-~~~~~D~~~~~~~~~~~~~~~~~~-g~id   79 (245)
T 1uls_A            4 KDKAVLITGAAHGIGRATLELFA-KEGA-RLVACDIEEGPLREAAEAVGA-HPVVMDVADPASVERGFAEALAHL-GRLD   79 (245)
T ss_dssp             TTCEEEEESTTSHHHHHHHHHHH-HTTC-EEEEEESCHHHHHHHHHTTTC-EEEECCTTCHHHHHHHHHHHHHHH-SSCC
T ss_pred             CCCEEEEECCCCHHHHHHHHHHH-HCCC-EEEEEeCCHHHHHHHHHHcCC-EEEEecCCCHHHHHHHHHHHHHHc-CCCC
Confidence            4678999987 999999999554 5699 57777788776554 344563 2333222 2233334444433322 5799


Q ss_pred             EEEeCCC
Q 017868          258 VSFDCAG  264 (365)
Q Consensus       258 ~vid~~g  264 (365)
                      ++|.++|
T Consensus        80 ~lvn~Ag   86 (245)
T 1uls_A           80 GVVHYAG   86 (245)
T ss_dssp             EEEECCC
T ss_pred             EEEECCC
Confidence            9999988

>3mb5_A SAM-dependent methyltransferase; RNA methyltransferase, M1A, TRMI, intermolecular contacts, R specificity, tetramer, disulfide bond; HET: SAM; 1.60A {Pyrococcus abyssi} PDB: 3lga_A* 3lhd_C*

Probab=96.51  E-value=0.013  Score=49.90  Aligned_cols=103  Identities=21%  Similarity=0.226  Sum_probs=70.5

Q ss_pred             HHHhcCCCCCCEEEEEcCCHHHHHHHHHHHHHCC-CCeEEEEeCChhHHHHHHHc----CCCE-EEeCCCCcccHHHHHH
Q 017868          173 ACRRANIGPETNVLIMGAGPIGLVTMLGAPRAFG-APRIVIVDVDDYRLSVAKEI----GADN-IVKVSTNLQDIAEEVE  246 (365)
Q Consensus       173 ~~~~~~~~~g~~vlI~G~g~~G~~ai~~l~~~~g-~~~vi~v~~~~~~~~~~~~~----g~~~-~~~~~~~~~~~~~~i~  246 (365)
                      .+....++++++||-.|+|. |..+.. +++..+ ...+++++.+++..+.+++.    |... +.....   ++.+.  
T Consensus        85 i~~~~~~~~~~~vldiG~G~-G~~~~~-l~~~~~~~~~v~~~D~~~~~~~~a~~~~~~~~~~~~v~~~~~---d~~~~--  157 (255)
T 3mb5_A           85 IVAYAGISPGDFIVEAGVGS-GALTLF-LANIVGPEGRVVSYEIREDFAKLAWENIKWAGFDDRVTIKLK---DIYEG--  157 (255)
T ss_dssp             HHHHTTCCTTCEEEEECCTT-SHHHHH-HHHHHCTTSEEEEECSCHHHHHHHHHHHHHHTCTTTEEEECS---CGGGC--
T ss_pred             HHHhhCCCCCCEEEEecCCc-hHHHHH-HHHHhCCCeEEEEEecCHHHHHHHHHHHHHcCCCCceEEEEC---chhhc--
Confidence            34667889999999999875 777777 666643 45899999998877766543    5432 222212   21111  


Q ss_pred             HHHHHhCCCceEEEeCCCCH-HHHHHHHHhcccCCEEEEEc
Q 017868          247 KIQKAMGTGIDVSFDCAGLN-KTMSTALGATCAGGKVCLVG  286 (365)
Q Consensus       247 ~~~~~~~~~~d~vid~~g~~-~~~~~~~~~l~~~G~~~~~g  286 (365)
                          .....+|+|+.....+ ..+..+.+.|+++|.++.+.
T Consensus       158 ----~~~~~~D~v~~~~~~~~~~l~~~~~~L~~gG~l~~~~  194 (255)
T 3mb5_A          158 ----IEEENVDHVILDLPQPERVVEHAAKALKPGGFFVAYT  194 (255)
T ss_dssp             ----CCCCSEEEEEECSSCGGGGHHHHHHHEEEEEEEEEEE
T ss_pred             ----cCCCCcCEEEECCCCHHHHHHHHHHHcCCCCEEEEEE
Confidence                1145699999866654 37788999999999998874

>2ae2_A Protein (tropinone reductase-II); oxidoreductase, tropane alkaloid biosynthesis, reduction of tropinone to pseudotropine; HET: NAP PTO; 1.90A {Datura stramonium} SCOP: c.2.1.2 PDB: 2ae1_A* 1ipe_A* 1ipf_A*

Probab=96.50  E-value=0.016  Score=49.51  Aligned_cols=82  Identities=13%  Similarity=0.182  Sum_probs=50.5

Q ss_pred             CCCEEEEEcC-CHHHHHHHHHHHHHCCCCeEEEEeCChhHHHH-HHH---cCCCE-EEeCCC-CcccHHHHHHHHHHHhC
Q 017868          181 PETNVLIMGA-GPIGLVTMLGAPRAFGAPRIVIVDVDDYRLSV-AKE---IGADN-IVKVST-NLQDIAEEVEKIQKAMG  253 (365)
Q Consensus       181 ~g~~vlI~G~-g~~G~~ai~~l~~~~g~~~vi~v~~~~~~~~~-~~~---~g~~~-~~~~~~-~~~~~~~~i~~~~~~~~  253 (365)
                      .+.++||+|+ |++|.++++.++ ..|+ .|+.+++++++.+. .++   .+... .+..+- +.+++.+.+++..+..+
T Consensus         8 ~~k~vlVTGas~giG~~ia~~l~-~~G~-~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~D~~~~~~~~~~~~~~~~~~~   85 (260)
T 2ae2_A            8 EGCTALVTGGSRGIGYGIVEELA-SLGA-SVYTCSRNQKELNDCLTQWRSKGFKVEASVCDLSSRSERQELMNTVANHFH   85 (260)
T ss_dssp             TTCEEEEESCSSHHHHHHHHHHH-HTTC-EEEEEESCHHHHHHHHHHHHHTTCEEEEEECCTTCHHHHHHHHHHHHHHTT
T ss_pred             CCCEEEEECCCcHHHHHHHHHHH-HCCC-EEEEEeCCHHHHHHHHHHHHhcCCcEEEEEcCCCCHHHHHHHHHHHHHHcC
Confidence            4678999987 999999999555 5698 57777787766543 222   24321 222222 22333344444433332


Q ss_pred             CCceEEEeCCC
Q 017868          254 TGIDVSFDCAG  264 (365)
Q Consensus       254 ~~~d~vid~~g  264 (365)
                      +++|++|.++|
T Consensus        86 g~id~lv~~Ag   96 (260)
T 2ae2_A           86 GKLNILVNNAG   96 (260)
T ss_dssp             TCCCEEEECCC
T ss_pred             CCCCEEEECCC
Confidence            68999999887

>3h7a_A Short chain dehydrogenase; oxidoreductase, PSI-2, NYSGXRC, structural genomics, protein structure initiative; 1.87A {Rhodopseudomonas palustris}

Probab=96.49  E-value=0.019  Score=48.86  Aligned_cols=80  Identities=15%  Similarity=0.175  Sum_probs=50.5

Q ss_pred             CCCEEEEEcC-CHHHHHHHHHHHHHCCCCeEEEEeCChhHHHH-H---HHcCCCE-EEeCCC-CcccHHHHHHHHHHHhC
Q 017868          181 PETNVLIMGA-GPIGLVTMLGAPRAFGAPRIVIVDVDDYRLSV-A---KEIGADN-IVKVST-NLQDIAEEVEKIQKAMG  253 (365)
Q Consensus       181 ~g~~vlI~G~-g~~G~~ai~~l~~~~g~~~vi~v~~~~~~~~~-~---~~~g~~~-~~~~~~-~~~~~~~~i~~~~~~~~  253 (365)
                      .+.++||+|+ +++|.++++.++ ..|+ +|+.+++++++.+. .   ++.+... .+..+- +.++....++++.+ . 
T Consensus         6 ~~k~vlVTGas~GIG~aia~~l~-~~G~-~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~Dv~~~~~v~~~~~~~~~-~-   81 (252)
T 3h7a_A            6 RNATVAVIGAGDYIGAEIAKKFA-AEGF-TVFAGRRNGEKLAPLVAEIEAAGGRIVARSLDARNEDEVTAFLNAADA-H-   81 (252)
T ss_dssp             CSCEEEEECCSSHHHHHHHHHHH-HTTC-EEEEEESSGGGGHHHHHHHHHTTCEEEEEECCTTCHHHHHHHHHHHHH-H-
T ss_pred             CCCEEEEECCCchHHHHHHHHHH-HCCC-EEEEEeCCHHHHHHHHHHHHhcCCeEEEEECcCCCHHHHHHHHHHHHh-h-
Confidence            4678999987 999999999555 5599 57778887765432 2   2334322 222222 22333344444444 2 


Q ss_pred             CCceEEEeCCC
Q 017868          254 TGIDVSFDCAG  264 (365)
Q Consensus       254 ~~~d~vid~~g  264 (365)
                      +++|++|.++|
T Consensus        82 g~id~lv~nAg   92 (252)
T 3h7a_A           82 APLEVTIFNVG   92 (252)
T ss_dssp             SCEEEEEECCC
T ss_pred             CCceEEEECCC
Confidence            68999999888

>2fk8_A Methoxy mycolic acid synthase 4; S-adenosylmethionine-dependent methyltransferase fold, trans; HET: SAM; 2.00A {Mycobacterium tuberculosis} SCOP: c.66.1.18 PDB: 2fk7_A* 3ha3_A* 3ha5_A* 3ha7_A*

Probab=96.47  E-value=0.016  Score=51.23  Aligned_cols=99  Identities=12%  Similarity=0.222  Sum_probs=67.8

Q ss_pred             HhcCCCCCCEEEEEcCCHHHHHHHHHHHHHCCCCeEEEEeCChhHHHHHHHc----CCCE-EEeCCCCcccHHHHHHHHH
Q 017868          175 RRANIGPETNVLIMGAGPIGLVTMLGAPRAFGAPRIVIVDVDDYRLSVAKEI----GADN-IVKVSTNLQDIAEEVEKIQ  249 (365)
Q Consensus       175 ~~~~~~~g~~vlI~G~g~~G~~ai~~l~~~~g~~~vi~v~~~~~~~~~~~~~----g~~~-~~~~~~~~~~~~~~i~~~~  249 (365)
                      +...++++++||-.|+|. |..+.. +++..|+ .+++++.+++..+.+++.    |... +.....+..++        
T Consensus        84 ~~~~~~~~~~vLDiGcG~-G~~~~~-la~~~~~-~v~gvD~s~~~~~~a~~~~~~~~~~~~v~~~~~d~~~~--------  152 (318)
T 2fk8_A           84 DKLDLKPGMTLLDIGCGW-GTTMRR-AVERFDV-NVIGLTLSKNQHARCEQVLASIDTNRSRQVLLQGWEDF--------  152 (318)
T ss_dssp             TTSCCCTTCEEEEESCTT-SHHHHH-HHHHHCC-EEEEEESCHHHHHHHHHHHHTSCCSSCEEEEESCGGGC--------
T ss_pred             HhcCCCCcCEEEEEcccc-hHHHHH-HHHHCCC-EEEEEECCHHHHHHHHHHHHhcCCCCceEEEECChHHC--------
Confidence            456778999999999876 777777 6666687 799999999888776553    3321 11111111111        


Q ss_pred             HHhCCCceEEEeC-----CCC---HHHHHHHHHhcccCCEEEEEcc
Q 017868          250 KAMGTGIDVSFDC-----AGL---NKTMSTALGATCAGGKVCLVGM  287 (365)
Q Consensus       250 ~~~~~~~d~vid~-----~g~---~~~~~~~~~~l~~~G~~~~~g~  287 (365)
                         ...+|+|+..     .+.   ...+..+.++|+++|.+++...
T Consensus       153 ---~~~fD~v~~~~~l~~~~~~~~~~~l~~~~~~LkpgG~l~~~~~  195 (318)
T 2fk8_A          153 ---AEPVDRIVSIEAFEHFGHENYDDFFKRCFNIMPADGRMTVQSS  195 (318)
T ss_dssp             ---CCCCSEEEEESCGGGTCGGGHHHHHHHHHHHSCTTCEEEEEEE
T ss_pred             ---CCCcCEEEEeChHHhcCHHHHHHHHHHHHHhcCCCcEEEEEEe
Confidence               3679999875     332   3466788899999999988653

>4fn4_A Short chain dehydrogenase; NADH-binding, rossmann fold, oxidoreductase; HET: NAD; 1.75A {Sulfolobus acidocaldarius}

Probab=96.46  E-value=0.026  Score=48.12  Aligned_cols=81  Identities=25%  Similarity=0.338  Sum_probs=53.5

Q ss_pred             CCCEEEEEcC-CHHHHHHHHHHHHHCCCCeEEEEeCChhHHHH----HHHcCCCEE-EeCC-CCcccHHHHHHHHHHHhC
Q 017868          181 PETNVLIMGA-GPIGLVTMLGAPRAFGAPRIVIVDVDDYRLSV----AKEIGADNI-VKVS-TNLQDIAEEVEKIQKAMG  253 (365)
Q Consensus       181 ~g~~vlI~G~-g~~G~~ai~~l~~~~g~~~vi~v~~~~~~~~~----~~~~g~~~~-~~~~-~~~~~~~~~i~~~~~~~~  253 (365)
                      +|+++||+|+ +++|.++++.++ ..|+ +|+.+++++++.+.    +++.|.... +..+ .+.++....+++..+.. 
T Consensus         6 ~gKvalVTGas~GIG~aiA~~la-~~Ga-~Vv~~~~~~~~~~~~~~~i~~~g~~~~~~~~Dvt~~~~v~~~~~~~~~~~-   82 (254)
T 4fn4_A            6 KNKVVIVTGAGSGIGRAIAKKFA-LNDS-IVVAVELLEDRLNQIVQELRGMGKEVLGVKADVSKKKDVEEFVRRTFETY-   82 (254)
T ss_dssp             TTCEEEEETTTSHHHHHHHHHHH-HTTC-EEEEEESCHHHHHHHHHHHHHTTCCEEEEECCTTSHHHHHHHHHHHHHHH-
T ss_pred             CCCEEEEeCCCCHHHHHHHHHHH-HcCC-EEEEEECCHHHHHHHHHHHHhcCCcEEEEEccCCCHHHHHHHHHHHHHHc-
Confidence            5789999987 999999999555 5699 67888888876542    344554332 2222 23344444444444433 


Q ss_pred             CCceEEEeCCC
Q 017868          254 TGIDVSFDCAG  264 (365)
Q Consensus       254 ~~~d~vid~~g  264 (365)
                      +++|++++++|
T Consensus        83 G~iDiLVNNAG   93 (254)
T 4fn4_A           83 SRIDVLCNNAG   93 (254)
T ss_dssp             SCCCEEEECCC
T ss_pred             CCCCEEEECCc
Confidence            58999999887

>1ae1_A Tropinone reductase-I; oxidoreductase, tropane alkaloid biosynthesis, reduction of tropinone to tropine, short-chain dehydrogenase; HET: NAP; 2.40A {Datura stramonium} SCOP: c.2.1.2

Probab=96.46  E-value=0.021  Score=49.26  Aligned_cols=83  Identities=16%  Similarity=0.256  Sum_probs=51.0

Q ss_pred             CCCEEEEEcC-CHHHHHHHHHHHHHCCCCeEEEEeCChhHHHHH-H---HcCCCE-EEeCCC-CcccHHHHHHHHHHHhC
Q 017868          181 PETNVLIMGA-GPIGLVTMLGAPRAFGAPRIVIVDVDDYRLSVA-K---EIGADN-IVKVST-NLQDIAEEVEKIQKAMG  253 (365)
Q Consensus       181 ~g~~vlI~G~-g~~G~~ai~~l~~~~g~~~vi~v~~~~~~~~~~-~---~~g~~~-~~~~~~-~~~~~~~~i~~~~~~~~  253 (365)
                      .+.++||+|+ +++|.++++.++ ..|+ .|+.+++++++.+.+ +   +.+... .+..+- +.++..+.++++.+..+
T Consensus        20 ~~k~vlVTGas~gIG~aia~~l~-~~G~-~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~D~~~~~~~~~~~~~~~~~~~   97 (273)
T 1ae1_A           20 KGTTALVTGGSKGIGYAIVEELA-GLGA-RVYTCSRNEKELDECLEIWREKGLNVEGSVCDLLSRTERDKLMQTVAHVFD   97 (273)
T ss_dssp             TTCEEEEESCSSHHHHHHHHHHH-HTTC-EEEEEESCHHHHHHHHHHHHHTTCCEEEEECCTTCHHHHHHHHHHHHHHTT
T ss_pred             CCCEEEEECCcchHHHHHHHHHH-HCCC-EEEEEeCCHHHHHHHHHHHHhcCCceEEEECCCCCHHHHHHHHHHHHHHcC
Confidence            4678999987 999999999554 5698 577778887665432 2   234322 222222 22333334444433333


Q ss_pred             CCceEEEeCCCC
Q 017868          254 TGIDVSFDCAGL  265 (365)
Q Consensus       254 ~~~d~vid~~g~  265 (365)
                      +++|++|.++|.
T Consensus        98 g~id~lv~nAg~  109 (273)
T 1ae1_A           98 GKLNILVNNAGV  109 (273)
T ss_dssp             SCCCEEEECCCC
T ss_pred             CCCcEEEECCCC
Confidence            689999998873

>4e6p_A Probable sorbitol dehydrogenase (L-iditol 2-dehyd; NAD(P)-binding, structural genomics, PSI-biology; HET: MSE; 2.10A {Sinorhizobium meliloti} PDB: 1k2w_A

Probab=96.45  E-value=0.031  Score=47.70  Aligned_cols=82  Identities=26%  Similarity=0.332  Sum_probs=52.8

Q ss_pred             CCCEEEEEcC-CHHHHHHHHHHHHHCCCCeEEEEeCChhHHH-HHHHcCCCE-EEeCCC-CcccHHHHHHHHHHHhCCCc
Q 017868          181 PETNVLIMGA-GPIGLVTMLGAPRAFGAPRIVIVDVDDYRLS-VAKEIGADN-IVKVST-NLQDIAEEVEKIQKAMGTGI  256 (365)
Q Consensus       181 ~g~~vlI~G~-g~~G~~ai~~l~~~~g~~~vi~v~~~~~~~~-~~~~~g~~~-~~~~~~-~~~~~~~~i~~~~~~~~~~~  256 (365)
                      .++++||+|+ +++|.++++.++ ..|+ +|+.++++.++.+ ..++++... .+..+- +.++..+.+++..+. -+++
T Consensus         7 ~~k~vlVTGas~gIG~~ia~~l~-~~G~-~V~~~~r~~~~~~~~~~~~~~~~~~~~~D~~~~~~v~~~~~~~~~~-~g~i   83 (259)
T 4e6p_A            7 EGKSALITGSARGIGRAFAEAYV-REGA-TVAIADIDIERARQAAAEIGPAAYAVQMDVTRQDSIDAAIAATVEH-AGGL   83 (259)
T ss_dssp             TTCEEEEETCSSHHHHHHHHHHH-HTTC-EEEEEESCHHHHHHHHHHHCTTEEEEECCTTCHHHHHHHHHHHHHH-SSSC
T ss_pred             CCCEEEEECCCcHHHHHHHHHHH-HCCC-EEEEEeCCHHHHHHHHHHhCCCceEEEeeCCCHHHHHHHHHHHHHH-cCCC
Confidence            5688999987 999999999555 5599 5777788877654 445555432 222222 223333444444332 3589


Q ss_pred             eEEEeCCCC
Q 017868          257 DVSFDCAGL  265 (365)
Q Consensus       257 d~vid~~g~  265 (365)
                      |++|.++|.
T Consensus        84 d~lv~~Ag~   92 (259)
T 4e6p_A           84 DILVNNAAL   92 (259)
T ss_dssp             CEEEECCCC
T ss_pred             CEEEECCCc
Confidence            999999883

>3ijr_A Oxidoreductase, short chain dehydrogenase/reducta; structural genomics, infectious D center for structural genomics of infectious diseases; HET: NAD; 2.05A {Bacillus anthracis str} PDB: 3i3o_A*

Probab=96.45  E-value=0.048  Score=47.50  Aligned_cols=81  Identities=19%  Similarity=0.268  Sum_probs=48.1

Q ss_pred             CCCEEEEEcC-CHHHHHHHHHHHHHCCCCeEEEEeCChh-HHH----HHHHcCCCE-EEeCCC-CcccHHHHHHHHHHHh
Q 017868          181 PETNVLIMGA-GPIGLVTMLGAPRAFGAPRIVIVDVDDY-RLS----VAKEIGADN-IVKVST-NLQDIAEEVEKIQKAM  252 (365)
Q Consensus       181 ~g~~vlI~G~-g~~G~~ai~~l~~~~g~~~vi~v~~~~~-~~~----~~~~~g~~~-~~~~~~-~~~~~~~~i~~~~~~~  252 (365)
                      .|+++||+|+ +++|.++++.++ ..|+ .|+.++++++ ..+    .+++.+... .+..+- +.++..+.+++..+..
T Consensus        46 ~gk~vlVTGas~GIG~aia~~la-~~G~-~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~Dv~d~~~v~~~~~~~~~~~  123 (291)
T 3ijr_A           46 KGKNVLITGGDSGIGRAVSIAFA-KEGA-NIAIAYLDEEGDANETKQYVEKEGVKCVLLPGDLSDEQHCKDIVQETVRQL  123 (291)
T ss_dssp             TTCEEEEETTTSHHHHHHHHHHH-HTTC-EEEEEESSCHHHHHHHHHHHHTTTCCEEEEESCTTSHHHHHHHHHHHHHHH
T ss_pred             CCCEEEEeCCCcHHHHHHHHHHH-HCCC-EEEEEeCCchHHHHHHHHHHHhcCCcEEEEECCCCCHHHHHHHHHHHHHHc
Confidence            5789999987 999999999555 5599 4666666543 222    233344432 222222 2233333444443332


Q ss_pred             CCCceEEEeCCC
Q 017868          253 GTGIDVSFDCAG  264 (365)
Q Consensus       253 ~~~~d~vid~~g  264 (365)
                       +++|++|.++|
T Consensus       124 -g~iD~lvnnAg  134 (291)
T 3ijr_A          124 -GSLNILVNNVA  134 (291)
T ss_dssp             -SSCCEEEECCC
T ss_pred             -CCCCEEEECCC
Confidence             57999999876

>4b79_A PA4098, probable short-chain dehydrogenase; oxidoreductase, infectious disease, structure-based inhibito; HET: NAD; 1.98A {Pseudomonas aeruginosa PAO1}

Probab=96.43  E-value=0.003  Score=53.45  Aligned_cols=79  Identities=20%  Similarity=0.350  Sum_probs=49.4

Q ss_pred             CCCCCEEEEEcC-CHHHHHHHHHHHHHCCCCeEEEEeCChhHHHHHHHcCCCEEEeCCCCcccHHHHHHHHHHHhCCCce
Q 017868          179 IGPETNVLIMGA-GPIGLVTMLGAPRAFGAPRIVIVDVDDYRLSVAKEIGADNIVKVSTNLQDIAEEVEKIQKAMGTGID  257 (365)
Q Consensus       179 ~~~g~~vlI~G~-g~~G~~ai~~l~~~~g~~~vi~v~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~i~~~~~~~~~~~d  257 (365)
                      +-+|+++||+|+ +++|.++++.+ ...|+ +|+.+++++++.+....-.+ ..+..+-.  + .+.++++.+.. +++|
T Consensus         8 lf~GK~alVTGas~GIG~aia~~l-a~~Ga-~Vv~~~~~~~~~~~~~~~~~-~~~~~Dv~--~-~~~v~~~~~~~-g~iD   80 (242)
T 4b79_A            8 IYAGQQVLVTGGSSGIGAAIAMQF-AELGA-EVVALGLDADGVHAPRHPRI-RREELDIT--D-SQRLQRLFEAL-PRLD   80 (242)
T ss_dssp             TTTTCEEEEETTTSHHHHHHHHHH-HHTTC-EEEEEESSTTSTTSCCCTTE-EEEECCTT--C-HHHHHHHHHHC-SCCS
T ss_pred             CCCCCEEEEeCCCCHHHHHHHHHH-HHCCC-EEEEEeCCHHHHhhhhcCCe-EEEEecCC--C-HHHHHHHHHhc-CCCC
Confidence            346899999987 99999999955 46699 67888887765442211111 11222211  1 22344444433 5799


Q ss_pred             EEEeCCC
Q 017868          258 VSFDCAG  264 (365)
Q Consensus       258 ~vid~~g  264 (365)
                      ++++++|
T Consensus        81 iLVNNAG   87 (242)
T 4b79_A           81 VLVNNAG   87 (242)
T ss_dssp             EEEECCC
T ss_pred             EEEECCC
Confidence            9999988

>1yde_A Retinal dehydrogenase/reductase 3; oxidoreductase, structural genomics, structural genomics CON SGC; 2.40A {Homo sapiens} SCOP: c.2.1.2

Probab=96.42  E-value=0.029  Score=48.31  Aligned_cols=81  Identities=21%  Similarity=0.263  Sum_probs=51.1

Q ss_pred             CCCEEEEEcC-CHHHHHHHHHHHHHCCCCeEEEEeCChhHHHHH-HHcCCCEEEeCCCC-cccHHHHHHHHHHHhCCCce
Q 017868          181 PETNVLIMGA-GPIGLVTMLGAPRAFGAPRIVIVDVDDYRLSVA-KEIGADNIVKVSTN-LQDIAEEVEKIQKAMGTGID  257 (365)
Q Consensus       181 ~g~~vlI~G~-g~~G~~ai~~l~~~~g~~~vi~v~~~~~~~~~~-~~~g~~~~~~~~~~-~~~~~~~i~~~~~~~~~~~d  257 (365)
                      .+.++||+|+ +++|.++++.++ ..|+ .|+.+++++++.+.+ +++.....+..+-. .+++...+++..+.. +++|
T Consensus         8 ~~k~vlVTGas~gIG~~ia~~l~-~~G~-~V~~~~r~~~~~~~~~~~~~~~~~~~~Dv~d~~~v~~~~~~~~~~~-g~iD   84 (270)
T 1yde_A            8 AGKVVVVTGGGRGIGAGIVRAFV-NSGA-RVVICDKDESGGRALEQELPGAVFILCDVTQEDDVKTLVSETIRRF-GRLD   84 (270)
T ss_dssp             TTCEEEEETCSSHHHHHHHHHHH-HTTC-EEEEEESCHHHHHHHHHHCTTEEEEECCTTSHHHHHHHHHHHHHHH-SCCC
T ss_pred             CCCEEEEECCCcHHHHHHHHHHH-HCCC-EEEEEeCCHHHHHHHHHHhcCCeEEEcCCCCHHHHHHHHHHHHHHc-CCCC
Confidence            4688999987 999999999554 5698 577778887766543 44432233333222 233333344333322 4799


Q ss_pred             EEEeCCC
Q 017868          258 VSFDCAG  264 (365)
Q Consensus       258 ~vid~~g  264 (365)
                      ++|.++|
T Consensus        85 ~lv~nAg   91 (270)
T 1yde_A           85 CVVNNAG   91 (270)
T ss_dssp             EEEECCC
T ss_pred             EEEECCC
Confidence            9999887

>1dl5_A Protein-L-isoaspartate O-methyltransferase; isoaspartyl residues, protein repair, deamidation, post-translational modification; HET: SAH; 1.80A {Thermotoga maritima} SCOP: c.66.1.7 d.197.1.1

Probab=96.40  E-value=0.0082  Score=53.19  Aligned_cols=103  Identities=22%  Similarity=0.267  Sum_probs=66.5

Q ss_pred             HHHhcCCCCCCEEEEEcCCHHHHHHHHHHHHHCC-CCeEEEEeCChhHHHHHHH----cCCCEEEeCCCCcccHHHHHHH
Q 017868          173 ACRRANIGPETNVLIMGAGPIGLVTMLGAPRAFG-APRIVIVDVDDYRLSVAKE----IGADNIVKVSTNLQDIAEEVEK  247 (365)
Q Consensus       173 ~~~~~~~~~g~~vlI~G~g~~G~~ai~~l~~~~g-~~~vi~v~~~~~~~~~~~~----~g~~~~~~~~~~~~~~~~~i~~  247 (365)
                      .++...++++++||-.|+|. |..+.. +++..+ ...|++++.+++..+.+++    .|...+.....+..+.   .. 
T Consensus        67 l~~~l~~~~~~~VLDiGcG~-G~~~~~-la~~~~~~~~v~gvD~s~~~~~~a~~~~~~~g~~~v~~~~~d~~~~---~~-  140 (317)
T 1dl5_A           67 FMEWVGLDKGMRVLEIGGGT-GYNAAV-MSRVVGEKGLVVSVEYSRKICEIAKRNVERLGIENVIFVCGDGYYG---VP-  140 (317)
T ss_dssp             HHHHTTCCTTCEEEEECCTT-SHHHHH-HHHHHCTTCEEEEEESCHHHHHHHHHHHHHTTCCSEEEEESCGGGC---CG-
T ss_pred             HHHhcCCCCcCEEEEecCCc-hHHHHH-HHHhcCCCCEEEEEECCHHHHHHHHHHHHHcCCCCeEEEECChhhc---cc-
Confidence            34667789999999999865 777777 666544 2469999999988776654    3543322111111111   10 


Q ss_pred             HHHHhCCCceEEEeCCCCHHHHHHHHHhcccCCEEEEE
Q 017868          248 IQKAMGTGIDVSFDCAGLNKTMSTALGATCAGGKVCLV  285 (365)
Q Consensus       248 ~~~~~~~~~d~vid~~g~~~~~~~~~~~l~~~G~~~~~  285 (365)
                          ....+|+|+...........+.+.|+++|++++.
T Consensus       141 ----~~~~fD~Iv~~~~~~~~~~~~~~~LkpgG~lvi~  174 (317)
T 1dl5_A          141 ----EFSPYDVIFVTVGVDEVPETWFTQLKEGGRVIVP  174 (317)
T ss_dssp             ----GGCCEEEEEECSBBSCCCHHHHHHEEEEEEEEEE
T ss_pred             ----cCCCeEEEEEcCCHHHHHHHHHHhcCCCcEEEEE
Confidence                1357999998654332335677899999998876

>3dfz_A SIRC, precorrin-2 dehydrogenase; NAD dehydrogenase, cobalamin biosynthesis, NAD, oxidoreducta porphyrin biosynthesis; 2.30A {Bacillus megaterium}

Probab=96.39  E-value=0.047  Score=45.43  Aligned_cols=106  Identities=10%  Similarity=0.076  Sum_probs=58.3

Q ss_pred             CCCEEEEEcCCHHHHHHHHHHHHHCCCCeEEEEeCCh-hHH-HHHHHcCCCEEEeCCCCcccHHHHHHHHHHHhCCCceE
Q 017868          181 PETNVLIMGAGPIGLVTMLGAPRAFGAPRIVIVDVDD-YRL-SVAKEIGADNIVKVSTNLQDIAEEVEKIQKAMGTGIDV  258 (365)
Q Consensus       181 ~g~~vlI~G~g~~G~~ai~~l~~~~g~~~vi~v~~~~-~~~-~~~~~~g~~~~~~~~~~~~~~~~~i~~~~~~~~~~~d~  258 (365)
                      .|.+|||.|+|.+|...+. .+...|++ |.+++... +.. +++++.+.. .+.-.-...+            -.++|+
T Consensus        30 ~gk~VLVVGgG~va~~ka~-~Ll~~GA~-VtVvap~~~~~l~~l~~~~~i~-~i~~~~~~~d------------L~~adL   94 (223)
T 3dfz_A           30 KGRSVLVVGGGTIATRRIK-GFLQEGAA-ITVVAPTVSAEINEWEAKGQLR-VKRKKVGEED------------LLNVFF   94 (223)
T ss_dssp             TTCCEEEECCSHHHHHHHH-HHGGGCCC-EEEECSSCCHHHHHHHHTTSCE-EECSCCCGGG------------SSSCSE
T ss_pred             CCCEEEEECCCHHHHHHHH-HHHHCCCE-EEEECCCCCHHHHHHHHcCCcE-EEECCCCHhH------------hCCCCE
Confidence            5789999999999999999 55566995 55554432 233 333333332 2211111111            257999


Q ss_pred             EEeCCCCHHHHHHHHHhcccCCEEEEEccCCCCccccchHhhhc
Q 017868          259 SFDCAGLNKTMSTALGATCAGGKVCLVGMGHHEMTVPLTPAAVR  302 (365)
Q Consensus       259 vid~~g~~~~~~~~~~~l~~~G~~~~~g~~~~~~~~~~~~~~~~  302 (365)
                      ||-+++.+.. +..+...+..|..+..........+....+..+
T Consensus        95 VIaAT~d~~~-N~~I~~~ak~gi~VNvvD~p~~~~f~~Paiv~r  137 (223)
T 3dfz_A           95 IVVATNDQAV-NKFVKQHIKNDQLVNMASSFSDGNIQIPAQFSR  137 (223)
T ss_dssp             EEECCCCTHH-HHHHHHHSCTTCEEEC-----CCSEECCEEEEE
T ss_pred             EEECCCCHHH-HHHHHHHHhCCCEEEEeCCcccCeEEEeeEEEe
Confidence            9999998744 444444444777765543333334444444333

>3uf0_A Short-chain dehydrogenase/reductase SDR; gluconate, gluconate 5-dehydratase, NAD(P) dependent, enzyme initiative, EFI, oxidoreductase; HET: NAP; 2.00A {Beutenbergia cavernae} SCOP: c.2.1.0

Probab=96.38  E-value=0.027  Score=48.60  Aligned_cols=81  Identities=26%  Similarity=0.256  Sum_probs=48.0

Q ss_pred             CCCEEEEEcC-CHHHHHHHHHHHHHCCCCeEEEEeCChhHHHHHHHc---CCC-EEEeCCCCcccHHHHHHHHHHHhCCC
Q 017868          181 PETNVLIMGA-GPIGLVTMLGAPRAFGAPRIVIVDVDDYRLSVAKEI---GAD-NIVKVSTNLQDIAEEVEKIQKAMGTG  255 (365)
Q Consensus       181 ~g~~vlI~G~-g~~G~~ai~~l~~~~g~~~vi~v~~~~~~~~~~~~~---g~~-~~~~~~~~~~~~~~~i~~~~~~~~~~  255 (365)
                      .|.++||+|+ +++|.++++.++ ..|+ +|+.+++++...+.++++   +.. ..+..+-.+.+-.+.+.+..+. .++
T Consensus        30 ~gk~~lVTGas~GIG~aia~~la-~~G~-~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~Dv~d~~~v~~~~~~~~~-~g~  106 (273)
T 3uf0_A           30 AGRTAVVTGAGSGIGRAIAHGYA-RAGA-HVLAWGRTDGVKEVADEIADGGGSAEAVVADLADLEGAANVAEELAA-TRR  106 (273)
T ss_dssp             TTCEEEEETTTSHHHHHHHHHHH-HTTC-EEEEEESSTHHHHHHHHHHTTTCEEEEEECCTTCHHHHHHHHHHHHH-HSC
T ss_pred             CCCEEEEeCCCcHHHHHHHHHHH-HCCC-EEEEEcCHHHHHHHHHHHHhcCCcEEEEEecCCCHHHHHHHHHHHHh-cCC
Confidence            5789999987 999999999555 5699 566676665544444443   322 1222222222222222222222 258


Q ss_pred             ceEEEeCCC
Q 017868          256 IDVSFDCAG  264 (365)
Q Consensus       256 ~d~vid~~g  264 (365)
                      +|++|.++|
T Consensus       107 iD~lv~nAg  115 (273)
T 3uf0_A          107 VDVLVNNAG  115 (273)
T ss_dssp             CCEEEECCC
T ss_pred             CcEEEECCC
Confidence            999999887

>2z1n_A Dehydrogenase; reductase, SDR, oxidoreductase; 1.80A {Aeropyrum pernix}

Probab=96.38  E-value=0.021  Score=48.79  Aligned_cols=80  Identities=23%  Similarity=0.330  Sum_probs=48.6

Q ss_pred             CCCEEEEEcC-CHHHHHHHHHHHHHCCCCeEEEEeCChhHHHH-HHHc-----C-CCEEEeCCC-CcccHHHHHHHHHHH
Q 017868          181 PETNVLIMGA-GPIGLVTMLGAPRAFGAPRIVIVDVDDYRLSV-AKEI-----G-ADNIVKVST-NLQDIAEEVEKIQKA  251 (365)
Q Consensus       181 ~g~~vlI~G~-g~~G~~ai~~l~~~~g~~~vi~v~~~~~~~~~-~~~~-----g-~~~~~~~~~-~~~~~~~~i~~~~~~  251 (365)
                      .+.++||+|+ |++|.++++.++ ..|+ .|+.+++++++.+. .+++     + -...+..+- +.+++...+++..+.
T Consensus         6 ~~k~vlVTGas~gIG~~ia~~l~-~~G~-~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~~D~~~~~~v~~~~~~~~~~   83 (260)
T 2z1n_A            6 QGKLAVVTAGSSGLGFASALELA-RNGA-RLLLFSRNREKLEAAASRIASLVSGAQVDIVAGDIREPGDIDRLFEKARDL   83 (260)
T ss_dssp             TTCEEEEETTTSHHHHHHHHHHH-HTTC-EEEEEESCHHHHHHHHHHHHHHSTTCCEEEEECCTTCHHHHHHHHHHHHHT
T ss_pred             CCCEEEEECCCchHHHHHHHHHH-HCCC-EEEEEeCCHHHHHHHHHHHHhcCCCCeEEEEEccCCCHHHHHHHHHHHHHh
Confidence            4678999987 999999999555 5598 57777787766543 2332     2 112222222 223333344444332


Q ss_pred             hCCCceEEEeCCC
Q 017868          252 MGTGIDVSFDCAG  264 (365)
Q Consensus       252 ~~~~~d~vid~~g  264 (365)
                        .++|++|.++|
T Consensus        84 --~gid~lv~~Ag   94 (260)
T 2z1n_A           84 --GGADILVYSTG   94 (260)
T ss_dssp             --TCCSEEEECCC
T ss_pred             --cCCCEEEECCC
Confidence              23999999887

>3e18_A Oxidoreductase; dehydrogenase, NAD-binding, structural genom protein structure initiative, PSI, NEW YORK structural GENO research consortium; HET: NAD; 1.95A {Listeria innocua}

Probab=96.37  E-value=0.016  Score=52.27  Aligned_cols=129  Identities=15%  Similarity=0.131  Sum_probs=81.9

Q ss_pred             CEEEEEcCCHHHHHHHHHHHHHCCCCeEEEEeCChhHHHHHHHcCCCEEEeCCCCcccHHHHHHHHHHHhCCCceEEEeC
Q 017868          183 TNVLIMGAGPIGLVTMLGAPRAFGAPRIVIVDVDDYRLSVAKEIGADNIVKVSTNLQDIAEEVEKIQKAMGTGIDVSFDC  262 (365)
Q Consensus       183 ~~vlI~G~g~~G~~ai~~l~~~~g~~~vi~v~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~i~~~~~~~~~~~d~vid~  262 (365)
                      -+|.|+|+|.+|...+..+.+..+++.+.++++++++.+.++++|+..   +    .++.+.+.      ...+|+|+.|
T Consensus         6 ~~vgiiG~G~~g~~~~~~l~~~~~~~l~av~d~~~~~~~~a~~~g~~~---~----~~~~~ll~------~~~~D~V~i~   72 (359)
T 3e18_A            6 YQLVIVGYGGMGSYHVTLASAADNLEVHGVFDILAEKREAAAQKGLKI---Y----ESYEAVLA------DEKVDAVLIA   72 (359)
T ss_dssp             EEEEEECCSHHHHHHHHHHHTSTTEEEEEEECSSHHHHHHHHTTTCCB---C----SCHHHHHH------CTTCCEEEEC
T ss_pred             CcEEEECcCHHHHHHHHHHHhCCCcEEEEEEcCCHHHHHHHHhcCCce---e----CCHHHHhc------CCCCCEEEEc
Confidence            368899999999988884444446755556688888888777777632   2    24433332      4579999999


Q ss_pred             CCCHHHHHHHHHhcccCCEEEEEccCCCCccccchH-------hhhcCcEEE-e-ecccCCcHHHHHHHHHcCCC
Q 017868          263 AGLNKTMSTALGATCAGGKVCLVGMGHHEMTVPLTP-------AAVREVDVV-G-VFRYKNTWPLCLELLRSGKI  328 (365)
Q Consensus       263 ~g~~~~~~~~~~~l~~~G~~~~~g~~~~~~~~~~~~-------~~~~~~~i~-~-~~~~~~~~~~~~~~l~~g~~  328 (365)
                      +....+.+.+..+|..+-+ +++.-   +.......       .-.+++.+. + ...+...++.+.+++++|.+
T Consensus        73 tp~~~h~~~~~~al~aGkh-Vl~EK---P~a~~~~ea~~l~~~a~~~g~~~~v~~~~r~~p~~~~~k~~i~~g~i  143 (359)
T 3e18_A           73 TPNDSHKELAISALEAGKH-VVCEK---PVTMTSEDLLAIMDVAKRVNKHFMVHQNRRWDEDFLIIKEMFEQKTI  143 (359)
T ss_dssp             SCGGGHHHHHHHHHHTTCE-EEEES---SCCSSHHHHHHHHHHHHHHTCCEEEECGGGGCHHHHHHHHHHHHTTT
T ss_pred             CCcHHHHHHHHHHHHCCCC-EEeeC---CCcCCHHHHHHHHHHHHHhCCeEEEEeeeccCHHHHHHHHHHHcCCC
Confidence            9988788888888886544 44421   11111111       112233222 2 22346678888899999887

>3f1l_A Uncharacterized oxidoreductase YCIK; E. coli, NADP+,; 0.95A {Escherichia coli K12} SCOP: c.2.1.0 PDB: 3f1k_A 3e9q_A* 3f5q_A 3gz4_A* 3f5s_A 3gy0_A* 3iah_A* 3g1t_A

Probab=96.37  E-value=0.043  Score=46.62  Aligned_cols=82  Identities=18%  Similarity=0.318  Sum_probs=50.7

Q ss_pred             CCCEEEEEcC-CHHHHHHHHHHHHHCCCCeEEEEeCChhHHHHH-HHc----C-CCEEEeCCC---CcccHHHHHHHHHH
Q 017868          181 PETNVLIMGA-GPIGLVTMLGAPRAFGAPRIVIVDVDDYRLSVA-KEI----G-ADNIVKVST---NLQDIAEEVEKIQK  250 (365)
Q Consensus       181 ~g~~vlI~G~-g~~G~~ai~~l~~~~g~~~vi~v~~~~~~~~~~-~~~----g-~~~~~~~~~---~~~~~~~~i~~~~~  250 (365)
                      .++++||+|+ +++|.++++.++ ..|+ +|+.+++++++.+.+ +++    + -...+..+-   +.++....++++.+
T Consensus        11 ~~k~vlVTGas~gIG~aia~~l~-~~G~-~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~D~~~~~~~~~~~~~~~~~~   88 (252)
T 3f1l_A           11 NDRIILVTGASDGIGREAAMTYA-RYGA-TVILLGRNEEKLRQVASHINEETGRQPQWFILDLLTCTSENCQQLAQRIAV   88 (252)
T ss_dssp             TTCEEEEESTTSHHHHHHHHHHH-HTTC-EEEEEESCHHHHHHHHHHHHHHHSCCCEEEECCTTTCCHHHHHHHHHHHHH
T ss_pred             CCCEEEEeCCCChHHHHHHHHHH-HCCC-EEEEEeCCHHHHHHHHHHHHhhcCCCceEEEEecccCCHHHHHHHHHHHHH
Confidence            5789999987 999999999554 5699 577788887765432 222    2 122232222   22233333443333


Q ss_pred             HhCCCceEEEeCCCC
Q 017868          251 AMGTGIDVSFDCAGL  265 (365)
Q Consensus       251 ~~~~~~d~vid~~g~  265 (365)
                      . .+++|++|.++|.
T Consensus        89 ~-~g~id~lv~nAg~  102 (252)
T 3f1l_A           89 N-YPRLDGVLHNAGL  102 (252)
T ss_dssp             H-CSCCSEEEECCCC
T ss_pred             h-CCCCCEEEECCcc
Confidence            2 4589999998873

>2hnk_A SAM-dependent O-methyltransferase; modified rossman fold; HET: SAH; 2.30A {Leptospira interrogans}

Probab=96.35  E-value=0.017  Score=48.69  Aligned_cols=104  Identities=20%  Similarity=0.242  Sum_probs=67.0

Q ss_pred             CCCCCCEEEEEcCCHHHHHHHHHHHHHCC-CCeEEEEeCChhHHHHHHH----cCCCE-EEeCCCCcccHHHHHHHHHHH
Q 017868          178 NIGPETNVLIMGAGPIGLVTMLGAPRAFG-APRIVIVDVDDYRLSVAKE----IGADN-IVKVSTNLQDIAEEVEKIQKA  251 (365)
Q Consensus       178 ~~~~g~~vlI~G~g~~G~~ai~~l~~~~g-~~~vi~v~~~~~~~~~~~~----~g~~~-~~~~~~~~~~~~~~i~~~~~~  251 (365)
                      ...++++||-.|+|. |..+.. +++..+ ...+++++.+++..+.+++    .|... +....   .+..+.+......
T Consensus        57 ~~~~~~~VLdiG~G~-G~~~~~-la~~~~~~~~v~~vD~~~~~~~~a~~~~~~~g~~~~v~~~~---~d~~~~~~~~~~~  131 (239)
T 2hnk_A           57 KISGAKRIIEIGTFT-GYSSLC-FASALPEDGKILCCDVSEEWTNVARKYWKENGLENKIFLKL---GSALETLQVLIDS  131 (239)
T ss_dssp             HHHTCSEEEEECCTT-CHHHHH-HHHHSCTTCEEEEEESCHHHHHHHHHHHHHTTCGGGEEEEE---SCHHHHHHHHHHC
T ss_pred             HhhCcCEEEEEeCCC-CHHHHH-HHHhCCCCCEEEEEECCHHHHHHHHHHHHHcCCCCCEEEEE---CCHHHHHHHHHhh
Confidence            345788999999863 777777 777764 3489999999987776654    35432 21111   2333333322110


Q ss_pred             ----------h-C-CCceEEEeCCCCH---HHHHHHHHhcccCCEEEEEc
Q 017868          252 ----------M-G-TGIDVSFDCAGLN---KTMSTALGATCAGGKVCLVG  286 (365)
Q Consensus       252 ----------~-~-~~~d~vid~~g~~---~~~~~~~~~l~~~G~~~~~g  286 (365)
                                . + ..+|+|+......   ..+..+.+.|+++|.++...
T Consensus       132 ~~~~~~~~~f~~~~~~fD~I~~~~~~~~~~~~l~~~~~~L~pgG~lv~~~  181 (239)
T 2hnk_A          132 KSAPSWASDFAFGPSSIDLFFLDADKENYPNYYPLILKLLKPGGLLIADN  181 (239)
T ss_dssp             SSCCGGGTTTCCSTTCEEEEEECSCGGGHHHHHHHHHHHEEEEEEEEEEC
T ss_pred             cccccccccccCCCCCcCEEEEeCCHHHHHHHHHHHHHHcCCCeEEEEEc
Confidence                      0 1 6799999876543   45678889999999998753

>3imf_A Short chain dehydrogenase; structural genomics, infectious D center for structural genomics of infectious diseases, oxidoreductase, csgid; HET: MSE; 1.99A {Bacillus anthracis str}

Probab=96.34  E-value=0.022  Score=48.66  Aligned_cols=81  Identities=28%  Similarity=0.324  Sum_probs=50.9

Q ss_pred             CCCEEEEEcC-CHHHHHHHHHHHHHCCCCeEEEEeCChhHHHHH-HHc---CCCE-EEeCCC-CcccHHHHHHHHHHHhC
Q 017868          181 PETNVLIMGA-GPIGLVTMLGAPRAFGAPRIVIVDVDDYRLSVA-KEI---GADN-IVKVST-NLQDIAEEVEKIQKAMG  253 (365)
Q Consensus       181 ~g~~vlI~G~-g~~G~~ai~~l~~~~g~~~vi~v~~~~~~~~~~-~~~---g~~~-~~~~~~-~~~~~~~~i~~~~~~~~  253 (365)
                      .+.++||+|+ +++|.++++.++ ..|+ +|+.+++++++.+.+ +++   +... .+..+- +.++..+.++++.+. .
T Consensus         5 ~~k~vlVTGas~gIG~aia~~l~-~~G~-~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~Dv~~~~~v~~~~~~~~~~-~   81 (257)
T 3imf_A            5 KEKVVIITGGSSGMGKGMATRFA-KEGA-RVVITGRTKEKLEEAKLEIEQFPGQILTVQMDVRNTDDIQKMIEQIDEK-F   81 (257)
T ss_dssp             TTCEEEETTTTSHHHHHHHHHHH-HTTC-EEEEEESCHHHHHHHHHHHCCSTTCEEEEECCTTCHHHHHHHHHHHHHH-H
T ss_pred             CCCEEEEECCCCHHHHHHHHHHH-HCCC-EEEEEeCCHHHHHHHHHHHHhcCCcEEEEEccCCCHHHHHHHHHHHHHH-c
Confidence            4678999987 999999999555 5699 577788888766543 333   2221 222222 223333444444333 2


Q ss_pred             CCceEEEeCCC
Q 017868          254 TGIDVSFDCAG  264 (365)
Q Consensus       254 ~~~d~vid~~g  264 (365)
                      +++|++|.++|
T Consensus        82 g~id~lv~nAg   92 (257)
T 3imf_A           82 GRIDILINNAA   92 (257)
T ss_dssp             SCCCEEEECCC
T ss_pred             CCCCEEEECCC
Confidence            58999999988

>3o26_A Salutaridine reductase; short chain dehydrogenase/reductases, oxidoreductase; HET: NDP; 1.91A {Papaver somniferum} SCOP: c.2.1.0

Probab=96.34  E-value=0.022  Score=49.93  Aligned_cols=83  Identities=12%  Similarity=0.152  Sum_probs=49.6

Q ss_pred             CCCCEEEEEcC-CHHHHHHHHHHHHHCCCCeEEEEeCChhHHH-HHHHc---CCC--EEEeCCCCc--ccHHHHHHHHHH
Q 017868          180 GPETNVLIMGA-GPIGLVTMLGAPRAFGAPRIVIVDVDDYRLS-VAKEI---GAD--NIVKVSTNL--QDIAEEVEKIQK  250 (365)
Q Consensus       180 ~~g~~vlI~G~-g~~G~~ai~~l~~~~g~~~vi~v~~~~~~~~-~~~~~---g~~--~~~~~~~~~--~~~~~~i~~~~~  250 (365)
                      ..+.++||+|+ +++|.++++.++ ..|+ .|+.++++.++.+ .++++   +..  ..+..+-.+  .+.....+.+.+
T Consensus        10 ~~~k~vlITGas~GIG~~~a~~L~-~~G~-~V~~~~r~~~~~~~~~~~l~~~~~~~~~~~~~Dl~~~~~~v~~~~~~~~~   87 (311)
T 3o26_A           10 TKRRCAVVTGGNKGIGFEICKQLS-SNGI-MVVLTCRDVTKGHEAVEKLKNSNHENVVFHQLDVTDPIATMSSLADFIKT   87 (311)
T ss_dssp             --CCEEEESSCSSHHHHHHHHHHH-HTTC-EEEEEESCHHHHHHHHHHHHTTTCCSEEEEECCTTSCHHHHHHHHHHHHH
T ss_pred             CCCcEEEEecCCchHHHHHHHHHH-HCCC-EEEEEeCCHHHHHHHHHHHHhcCCCceEEEEccCCCcHHHHHHHHHHHHH
Confidence            35778999987 999999999555 5599 6788888876643 23332   221  222222222  222333333322


Q ss_pred             HhCCCceEEEeCCCC
Q 017868          251 AMGTGIDVSFDCAGL  265 (365)
Q Consensus       251 ~~~~~~d~vid~~g~  265 (365)
                      . .+++|++|.++|.
T Consensus        88 ~-~g~iD~lv~nAg~  101 (311)
T 3o26_A           88 H-FGKLDILVNNAGV  101 (311)
T ss_dssp             H-HSSCCEEEECCCC
T ss_pred             h-CCCCCEEEECCcc
Confidence            2 3589999999984

>1jw9_B Molybdopterin biosynthesis MOEB protein; MOEB: modified rossmann fold, (2) Cys-X-X-Cys zinc-binding M MOAD: ubiquitin-like fold; 1.70A {Escherichia coli} SCOP: c.111.1.1 PDB: 1jwa_B* 1jwb_B*

Probab=96.34  E-value=0.015  Score=49.50  Aligned_cols=35  Identities=26%  Similarity=0.472  Sum_probs=29.5

Q ss_pred             CCEEEEEcCCHHHHHHHHHHHHHCCCCeEEEEeCCh
Q 017868          182 ETNVLIMGAGPIGLVTMLGAPRAFGAPRIVIVDVDD  217 (365)
Q Consensus       182 g~~vlI~G~g~~G~~ai~~l~~~~g~~~vi~v~~~~  217 (365)
                      +.+|+|.|+|++|..+++ .+...|...+..++.+.
T Consensus        31 ~~~VlVvG~Gg~G~~va~-~La~~Gv~~i~lvD~d~   65 (249)
T 1jw9_B           31 DSRVLIVGLGGLGCAASQ-YLASAGVGNLTLLDFDT   65 (249)
T ss_dssp             HCEEEEECCSHHHHHHHH-HHHHHTCSEEEEECCCB
T ss_pred             CCeEEEEeeCHHHHHHHH-HHHHcCCCeEEEEcCCC
Confidence            468999999999999999 44566998888888876

>3qiv_A Short-chain dehydrogenase or 3-oxoacyl-[acyl-CARR protein] reductase; structural genomics; 2.25A {Mycobacterium avium subsp}

Probab=96.33  E-value=0.03  Score=47.52  Aligned_cols=82  Identities=20%  Similarity=0.283  Sum_probs=50.7

Q ss_pred             CCCEEEEEcC-CHHHHHHHHHHHHHCCCCeEEEEeCChhHHHHH-HH---cCCCE-EEeCCC-CcccHHHHHHHHHHHhC
Q 017868          181 PETNVLIMGA-GPIGLVTMLGAPRAFGAPRIVIVDVDDYRLSVA-KE---IGADN-IVKVST-NLQDIAEEVEKIQKAMG  253 (365)
Q Consensus       181 ~g~~vlI~G~-g~~G~~ai~~l~~~~g~~~vi~v~~~~~~~~~~-~~---~g~~~-~~~~~~-~~~~~~~~i~~~~~~~~  253 (365)
                      .+.++||+|+ +++|.++++.++ ..|+ +|+.+++++++.+.+ ++   .+... .+..+- +.++..+.++++.+.. 
T Consensus         8 ~~k~vlITGas~giG~~~a~~l~-~~G~-~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~D~~~~~~~~~~~~~~~~~~-   84 (253)
T 3qiv_A            8 ENKVGIVTGSGGGIGQAYAEALA-REGA-AVVVADINAEAAEAVAKQIVADGGTAISVAVDVSDPESAKAMADRTLAEF-   84 (253)
T ss_dssp             TTCEEEEETTTSHHHHHHHHHHH-HTTC-EEEEEESCHHHHHHHHHHHHHTTCEEEEEECCTTSHHHHHHHHHHHHHHH-
T ss_pred             CCCEEEEECCCChHHHHHHHHHH-HCCC-EEEEEcCCHHHHHHHHHHHHhcCCcEEEEEccCCCHHHHHHHHHHHHHHc-
Confidence            5688999987 999999999555 5599 577788887765433 32   23321 222222 2233333344333322 


Q ss_pred             CCceEEEeCCCC
Q 017868          254 TGIDVSFDCAGL  265 (365)
Q Consensus       254 ~~~d~vid~~g~  265 (365)
                      +++|++|.++|.
T Consensus        85 g~id~li~~Ag~   96 (253)
T 3qiv_A           85 GGIDYLVNNAAI   96 (253)
T ss_dssp             SCCCEEEECCCC
T ss_pred             CCCCEEEECCCc
Confidence            489999999874

>3pk0_A Short-chain dehydrogenase/reductase SDR; ssgcid, structural genomics, seattle structural genomics CEN infectious disease; 1.75A {Mycobacterium smegmatis} SCOP: c.2.1.0

Probab=96.32  E-value=0.022  Score=48.81  Aligned_cols=81  Identities=17%  Similarity=0.212  Sum_probs=50.1

Q ss_pred             CCCEEEEEcC-CHHHHHHHHHHHHHCCCCeEEEEeCChhHHHH-HHH---cCC--CEEEeCCC-CcccHHHHHHHHHHHh
Q 017868          181 PETNVLIMGA-GPIGLVTMLGAPRAFGAPRIVIVDVDDYRLSV-AKE---IGA--DNIVKVST-NLQDIAEEVEKIQKAM  252 (365)
Q Consensus       181 ~g~~vlI~G~-g~~G~~ai~~l~~~~g~~~vi~v~~~~~~~~~-~~~---~g~--~~~~~~~~-~~~~~~~~i~~~~~~~  252 (365)
                      .|.++||+|+ +++|.++++.++ ..|+ +|+.+++++++.+. .++   .+.  ...+..+- +.+++.+.+++..+..
T Consensus         9 ~~k~vlVTGas~gIG~aia~~l~-~~G~-~V~~~~r~~~~~~~~~~~l~~~~~~~~~~~~~Dv~~~~~v~~~~~~~~~~~   86 (262)
T 3pk0_A            9 QGRSVVVTGGTKGIGRGIATVFA-RAGA-NVAVAGRSTADIDACVADLDQLGSGKVIGVQTDVSDRAQCDALAGRAVEEF   86 (262)
T ss_dssp             TTCEEEETTCSSHHHHHHHHHHH-HTTC-EEEEEESCHHHHHHHHHHHHTTSSSCEEEEECCTTSHHHHHHHHHHHHHHH
T ss_pred             CCCEEEEECCCcHHHHHHHHHHH-HCCC-EEEEEeCCHHHHHHHHHHHHhhCCCcEEEEEcCCCCHHHHHHHHHHHHHHh
Confidence            5688999987 999999999554 5699 67778888776543 222   331  12222222 2233333344433322


Q ss_pred             CCCceEEEeCCC
Q 017868          253 GTGIDVSFDCAG  264 (365)
Q Consensus       253 ~~~~d~vid~~g  264 (365)
                       +++|++|.++|
T Consensus        87 -g~id~lvnnAg   97 (262)
T 3pk0_A           87 -GGIDVVCANAG   97 (262)
T ss_dssp             -SCCSEEEECCC
T ss_pred             -CCCCEEEECCC
Confidence             58999999887

>1g0o_A Trihydroxynaphthalene reductase; protein-NADPH-active site inhibitor complex, dinucleotide binding fold, oxidoreductase; HET: NDP PYQ; 1.70A {Magnaporthe grisea} SCOP: c.2.1.2 PDB: 1doh_A* 1g0n_A* 1ybv_A*

Probab=96.32  E-value=0.047  Score=47.30  Aligned_cols=104  Identities=21%  Similarity=0.305  Sum_probs=60.2

Q ss_pred             CCCEEEEEcC-CHHHHHHHHHHHHHCCCCeEEEEeCChhH-HH----HHHHcCCCE-EEeCCC-CcccHHHHHHHHHHHh
Q 017868          181 PETNVLIMGA-GPIGLVTMLGAPRAFGAPRIVIVDVDDYR-LS----VAKEIGADN-IVKVST-NLQDIAEEVEKIQKAM  252 (365)
Q Consensus       181 ~g~~vlI~G~-g~~G~~ai~~l~~~~g~~~vi~v~~~~~~-~~----~~~~~g~~~-~~~~~~-~~~~~~~~i~~~~~~~  252 (365)
                      .+.++||+|+ +++|.++++.++ ..|+ .|+.++++.++ .+    .+++.+... .+..+- +.+++...+.++.+..
T Consensus        28 ~~k~vlVTGas~gIG~~ia~~l~-~~G~-~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~D~~~~~~~~~~~~~~~~~~  105 (283)
T 1g0o_A           28 EGKVALVTGAGRGIGREMAMELG-RRGC-KVIVNYANSTESAEEVVAAIKKNGSDAACVKANVGVVEDIVRMFEEAVKIF  105 (283)
T ss_dssp             TTCEEEETTTTSHHHHHHHHHHH-HTTC-EEEEEESSCHHHHHHHHHHHHHTTCCEEEEECCTTCHHHHHHHHHHHHHHH
T ss_pred             CCCEEEEeCCCcHHHHHHHHHHH-HCCC-EEEEEeCCchHHHHHHHHHHHHhCCCeEEEEcCCCCHHHHHHHHHHHHHHc
Confidence            4678999987 999999999555 5599 46666665432 22    234445432 222222 2233333344333322


Q ss_pred             CCCceEEEeCCCCH----------H---------------HHHHHHHhcccCCEEEEEcc
Q 017868          253 GTGIDVSFDCAGLN----------K---------------TMSTALGATCAGGKVCLVGM  287 (365)
Q Consensus       253 ~~~~d~vid~~g~~----------~---------------~~~~~~~~l~~~G~~~~~g~  287 (365)
                       +++|++|.++|..          +               ..+.+...+...|+++.++.
T Consensus       106 -g~iD~lv~~Ag~~~~~~~~~~~~~~~~~~~~~N~~g~~~l~~~~~~~~~~~g~iv~isS  164 (283)
T 1g0o_A          106 -GKLDIVCSNSGVVSFGHVKDVTPEEFDRVFTINTRGQFFVAREAYKHLEIGGRLILMGS  164 (283)
T ss_dssp             -SCCCEEEECCCCCCCCCGGGCCHHHHHHHHHHHTHHHHHHHHHHHHHSCTTCEEEEECC
T ss_pred             -CCCCEEEECCCcCCCCCcccCCHHHHHHHHHHhhHHHHHHHHHHHHHHhcCCeEEEEec
Confidence             4799999988731          1               11234445556789998864

>4dqx_A Probable oxidoreductase protein; structural genomics, PSI-biology, NEW YORK structural genomi research consortium, nysgrc; 2.00A {Rhizobium etli}

Probab=96.32  E-value=0.031  Score=48.36  Aligned_cols=81  Identities=30%  Similarity=0.358  Sum_probs=52.0

Q ss_pred             CCCEEEEEcC-CHHHHHHHHHHHHHCCCCeEEEEeCChhHHH-HHHHcCCCE-EEeCCC-CcccHHHHHHHHHHHhCCCc
Q 017868          181 PETNVLIMGA-GPIGLVTMLGAPRAFGAPRIVIVDVDDYRLS-VAKEIGADN-IVKVST-NLQDIAEEVEKIQKAMGTGI  256 (365)
Q Consensus       181 ~g~~vlI~G~-g~~G~~ai~~l~~~~g~~~vi~v~~~~~~~~-~~~~~g~~~-~~~~~~-~~~~~~~~i~~~~~~~~~~~  256 (365)
                      .+.++||+|+ +++|.++++.++ ..|+ +|+.+++++++.+ ..++++... .+..+- +.++..+.++++.+.. +++
T Consensus        26 ~~k~vlVTGas~GIG~aia~~l~-~~G~-~V~~~~r~~~~~~~~~~~~~~~~~~~~~Dv~d~~~v~~~~~~~~~~~-g~i  102 (277)
T 4dqx_A           26 NQRVCIVTGGGSGIGRATAELFA-KNGA-YVVVADVNEDAAVRVANEIGSKAFGVRVDVSSAKDAESMVEKTTAKW-GRV  102 (277)
T ss_dssp             TTCEEEEETTTSHHHHHHHHHHH-HTTC-EEEEEESSHHHHHHHHHHHCTTEEEEECCTTCHHHHHHHHHHHHHHH-SCC
T ss_pred             CCCEEEEECCCcHHHHHHHHHHH-HCCC-EEEEEeCCHHHHHHHHHHhCCceEEEEecCCCHHHHHHHHHHHHHHc-CCC
Confidence            5679999987 999999999555 5699 5777778877654 445555432 222222 2233333444443332 479


Q ss_pred             eEEEeCCC
Q 017868          257 DVSFDCAG  264 (365)
Q Consensus       257 d~vid~~g  264 (365)
                      |++|.++|
T Consensus       103 D~lv~nAg  110 (277)
T 4dqx_A          103 DVLVNNAG  110 (277)
T ss_dssp             CEEEECCC
T ss_pred             CEEEECCC
Confidence            99999988

>3rkr_A Short chain oxidoreductase; rossmann fold; HET: NAP; 2.42A {Uncultured bacterium BIO5}

Probab=96.30  E-value=0.021  Score=48.94  Aligned_cols=83  Identities=22%  Similarity=0.222  Sum_probs=51.3

Q ss_pred             CCCCEEEEEcC-CHHHHHHHHHHHHHCCCCeEEEEeCChhHHHHH----HHcCCCE-EEeCCC-CcccHHHHHHHHHHHh
Q 017868          180 GPETNVLIMGA-GPIGLVTMLGAPRAFGAPRIVIVDVDDYRLSVA----KEIGADN-IVKVST-NLQDIAEEVEKIQKAM  252 (365)
Q Consensus       180 ~~g~~vlI~G~-g~~G~~ai~~l~~~~g~~~vi~v~~~~~~~~~~----~~~g~~~-~~~~~~-~~~~~~~~i~~~~~~~  252 (365)
                      -.+.++||+|+ +++|.+++..++ ..|+ .|+.++++.++.+.+    ++.+... .+..+- +.+++.+.+.++.+..
T Consensus        27 l~~k~vlITGas~gIG~~la~~l~-~~G~-~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~D~~~~~~v~~~~~~~~~~~  104 (262)
T 3rkr_A           27 LSGQVAVVTGASRGIGAAIARKLG-SLGA-RVVLTARDVEKLRAVEREIVAAGGEAESHACDLSHSDAIAAFATGVLAAH  104 (262)
T ss_dssp             TTTCEEEESSTTSHHHHHHHHHHH-HTTC-EEEEEESCHHHHHHHHHHHHHTTCEEEEEECCTTCHHHHHHHHHHHHHHH
T ss_pred             cCCCEEEEECCCChHHHHHHHHHH-HCCC-EEEEEECCHHHHHHHHHHHHHhCCceeEEEecCCCHHHHHHHHHHHHHhc
Confidence            35789999987 999999999555 5599 577788887765432    2234322 222222 2233333344443332


Q ss_pred             CCCceEEEeCCCC
Q 017868          253 GTGIDVSFDCAGL  265 (365)
Q Consensus       253 ~~~~d~vid~~g~  265 (365)
                       +++|++|.++|.
T Consensus       105 -g~id~lv~~Ag~  116 (262)
T 3rkr_A          105 -GRCDVLVNNAGV  116 (262)
T ss_dssp             -SCCSEEEECCCC
T ss_pred             -CCCCEEEECCCc
Confidence             479999999884

>3abi_A Putative uncharacterized protein PH1688; L-lysine dehydrogenase, oxidoreductase; HET: NAD; 2.44A {Pyrococcus horikoshii}

Probab=96.29  E-value=0.027  Score=50.84  Aligned_cols=93  Identities=19%  Similarity=0.240  Sum_probs=62.0

Q ss_pred             CEEEEEcCCHHHHHHHHHHHHHCCCCeEEEEeCChhHHHHHHHcCCCEEEeCCCCcccHHHHHHHHHHHhCCCceEEEeC
Q 017868          183 TNVLIMGAGPIGLVTMLGAPRAFGAPRIVIVDVDDYRLSVAKEIGADNIVKVSTNLQDIAEEVEKIQKAMGTGIDVSFDC  262 (365)
Q Consensus       183 ~~vlI~G~g~~G~~ai~~l~~~~g~~~vi~v~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~i~~~~~~~~~~~d~vid~  262 (365)
                      -+|+|+|+|.+|..+++.|++  .. .|.+++.+.++.+.+++....  +..+-.  +. +.+.+..    .+.|+||+|
T Consensus        17 mkilvlGaG~vG~~~~~~L~~--~~-~v~~~~~~~~~~~~~~~~~~~--~~~d~~--d~-~~l~~~~----~~~DvVi~~   84 (365)
T 3abi_A           17 MKVLILGAGNIGRAIAWDLKD--EF-DVYIGDVNNENLEKVKEFATP--LKVDAS--NF-DKLVEVM----KEFELVIGA   84 (365)
T ss_dssp             CEEEEECCSHHHHHHHHHHTT--TS-EEEEEESCHHHHHHHTTTSEE--EECCTT--CH-HHHHHHH----TTCSEEEEC
T ss_pred             cEEEEECCCHHHHHHHHHHhc--CC-CeEEEEcCHHHHHHHhccCCc--EEEecC--CH-HHHHHHH----hCCCEEEEe
Confidence            479999999999999994543  34 567778888888777654322  222222  22 2333332    478999999


Q ss_pred             CCCHHHHHHHHHhcccCCEEEEEcc
Q 017868          263 AGLNKTMSTALGATCAGGKVCLVGM  287 (365)
Q Consensus       263 ~g~~~~~~~~~~~l~~~G~~~~~g~  287 (365)
                      ++...+...+-.++..+-+++.++.
T Consensus        85 ~p~~~~~~v~~~~~~~g~~yvD~s~  109 (365)
T 3abi_A           85 LPGFLGFKSIKAAIKSKVDMVDVSF  109 (365)
T ss_dssp             CCGGGHHHHHHHHHHHTCEEEECCC
T ss_pred             cCCcccchHHHHHHhcCcceEeeec
Confidence            9865455566667777888887653

>3i1j_A Oxidoreductase, short chain dehydrogenase/reducta; dimer, MIXE beta, structural genomics, PSI-2; 1.90A {Pseudomonas syringae PV} SCOP: c.2.1.0

Probab=96.29  E-value=0.029  Score=47.43  Aligned_cols=82  Identities=21%  Similarity=0.274  Sum_probs=50.6

Q ss_pred             CCCEEEEEcC-CHHHHHHHHHHHHHCCCCeEEEEeCChhHHHHH----HHcCC--CEEEeCCC---CcccHHHHHHHHHH
Q 017868          181 PETNVLIMGA-GPIGLVTMLGAPRAFGAPRIVIVDVDDYRLSVA----KEIGA--DNIVKVST---NLQDIAEEVEKIQK  250 (365)
Q Consensus       181 ~g~~vlI~G~-g~~G~~ai~~l~~~~g~~~vi~v~~~~~~~~~~----~~~g~--~~~~~~~~---~~~~~~~~i~~~~~  250 (365)
                      .+.++||+|+ +++|.+++..++ ..|+ +|+.+++++++.+.+    ++.+.  ..++..+-   +.+++.+.++++.+
T Consensus        13 ~~k~vlITGas~gIG~~ia~~l~-~~G~-~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~d~d~~~~~~~~~~~~~~~~   90 (247)
T 3i1j_A           13 KGRVILVTGAARGIGAAAARAYA-AHGA-SVVLLGRTEASLAEVSDQIKSAGQPQPLIIALNLENATAQQYRELAARVEH   90 (247)
T ss_dssp             TTCEEEESSTTSHHHHHHHHHHH-HTTC-EEEEEESCHHHHHHHHHHHHHTTSCCCEEEECCTTTCCHHHHHHHHHHHHH
T ss_pred             CCCEEEEeCCCChHHHHHHHHHH-HCCC-EEEEEecCHHHHHHHHHHHHhcCCCCceEEEeccccCCHHHHHHHHHHHHH
Confidence            5788999987 999999999554 5699 577888887765432    23331  22333222   22233333333333


Q ss_pred             HhCCCceEEEeCCCC
Q 017868          251 AMGTGIDVSFDCAGL  265 (365)
Q Consensus       251 ~~~~~~d~vid~~g~  265 (365)
                      . .+++|++|.++|.
T Consensus        91 ~-~g~id~lv~nAg~  104 (247)
T 3i1j_A           91 E-FGRLDGLLHNASI  104 (247)
T ss_dssp             H-HSCCSEEEECCCC
T ss_pred             h-CCCCCEEEECCcc
Confidence            2 2489999998873

>3rwb_A TPLDH, pyridoxal 4-dehydrogenase; short chain dehydrogenase/reductase, 4-pyridoxola NAD+, oxidoreductase; HET: NAD 4PL; 1.70A {Mesorhizobium loti} PDB: 3ndr_A* 3nug_A*

Probab=96.29  E-value=0.028  Score=47.65  Aligned_cols=81  Identities=22%  Similarity=0.293  Sum_probs=52.4

Q ss_pred             CCCEEEEEcC-CHHHHHHHHHHHHHCCCCeEEEEeCChhHHH-HHHHcCCCEEE-eCCC-CcccHHHHHHHHHHHhCCCc
Q 017868          181 PETNVLIMGA-GPIGLVTMLGAPRAFGAPRIVIVDVDDYRLS-VAKEIGADNIV-KVST-NLQDIAEEVEKIQKAMGTGI  256 (365)
Q Consensus       181 ~g~~vlI~G~-g~~G~~ai~~l~~~~g~~~vi~v~~~~~~~~-~~~~~g~~~~~-~~~~-~~~~~~~~i~~~~~~~~~~~  256 (365)
                      .|+++||+|+ +++|.++++.++ ..|+ +|+.+++++++.+ ..++++..... ..+- +.++..+.++++.+.. +++
T Consensus         5 ~gk~vlVTGas~gIG~a~a~~l~-~~G~-~V~~~~r~~~~~~~~~~~~~~~~~~~~~Dv~~~~~v~~~~~~~~~~~-g~i   81 (247)
T 3rwb_A            5 AGKTALVTGAAQGIGKAIAARLA-ADGA-TVIVSDINAEGAKAAAASIGKKARAIAADISDPGSVKALFAEIQALT-GGI   81 (247)
T ss_dssp             TTCEEEEETTTSHHHHHHHHHHH-HTTC-EEEEECSCHHHHHHHHHHHCTTEEECCCCTTCHHHHHHHHHHHHHHH-SCC
T ss_pred             CCCEEEEECCCCHHHHHHHHHHH-HCCC-EEEEEeCCHHHHHHHHHHhCCceEEEEcCCCCHHHHHHHHHHHHHHC-CCC
Confidence            5789999987 999999999554 5699 5778888877655 34556543322 1121 2233334444443332 479


Q ss_pred             eEEEeCCC
Q 017868          257 DVSFDCAG  264 (365)
Q Consensus       257 d~vid~~g  264 (365)
                      |++|.++|
T Consensus        82 d~lv~nAg   89 (247)
T 3rwb_A           82 DILVNNAS   89 (247)
T ss_dssp             SEEEECCC
T ss_pred             CEEEECCC
Confidence            99999888

>1sny_A Sniffer CG10964-PA; alpha and beta protein, rossmann fold, dinucleotide binding oxidoreductase; HET: NAP; 1.75A {Drosophila melanogaster} SCOP: c.2.1.2

Probab=96.29  E-value=0.013  Score=50.34  Aligned_cols=83  Identities=17%  Similarity=0.292  Sum_probs=50.1

Q ss_pred             CCCCEEEEEcC-CHHHHHHHHHHHHHCC---CCeEEEEeCChhHHHHHHHc---CCC-EEEeCCC-CcccHHHHHHHHHH
Q 017868          180 GPETNVLIMGA-GPIGLVTMLGAPRAFG---APRIVIVDVDDYRLSVAKEI---GAD-NIVKVST-NLQDIAEEVEKIQK  250 (365)
Q Consensus       180 ~~g~~vlI~G~-g~~G~~ai~~l~~~~g---~~~vi~v~~~~~~~~~~~~~---g~~-~~~~~~~-~~~~~~~~i~~~~~  250 (365)
                      -++.++||+|+ |++|.++++.++ ..|   + .|+.++++.++.+.++++   +.. ..+..+- +.+++.+.+.++.+
T Consensus        19 ~~~k~vlITGasggIG~~la~~L~-~~G~~~~-~V~~~~r~~~~~~~~~~l~~~~~~~~~~~~Dl~~~~~v~~~~~~~~~   96 (267)
T 1sny_A           19 SHMNSILITGCNRGLGLGLVKALL-NLPQPPQ-HLFTTCRNREQAKELEDLAKNHSNIHILEIDLRNFDAYDKLVADIEG   96 (267)
T ss_dssp             -CCSEEEESCCSSHHHHHHHHHHH-TSSSCCS-EEEEEESCTTSCHHHHHHHHHCTTEEEEECCTTCGGGHHHHHHHHHH
T ss_pred             CCCCEEEEECCCCcHHHHHHHHHH-hcCCCCc-EEEEEecChhhhHHHHHhhccCCceEEEEecCCChHHHHHHHHHHHH
Confidence            35678999987 999999999454 558   6 677777776543333322   222 2222222 23445555554443


Q ss_pred             HhCC-CceEEEeCCC
Q 017868          251 AMGT-GIDVSFDCAG  264 (365)
Q Consensus       251 ~~~~-~~d~vid~~g  264 (365)
                      ..+. ++|++|.++|
T Consensus        97 ~~g~~~id~li~~Ag  111 (267)
T 1sny_A           97 VTKDQGLNVLFNNAG  111 (267)
T ss_dssp             HHGGGCCSEEEECCC
T ss_pred             hcCCCCccEEEECCC
Confidence            3332 7999999887

>3hem_A Cyclopropane-fatty-acyl-phospholipid synthase 2; protein-ligand complex, cytoplasm, lipid synthesis, methyltransferase; HET: D22; 2.39A {Mycobacterium tuberculosis} SCOP: c.66.1.18 PDB: 1kpi_A*

Probab=96.28  E-value=0.038  Score=48.35  Aligned_cols=100  Identities=12%  Similarity=0.171  Sum_probs=68.8

Q ss_pred             HHhcCCCCCCEEEEEcCCHHHHHHHHHHHHHCCCCeEEEEeCChhHHHHHHH----cCCC-EEEeCCCCcccHHHHHHHH
Q 017868          174 CRRANIGPETNVLIMGAGPIGLVTMLGAPRAFGAPRIVIVDVDDYRLSVAKE----IGAD-NIVKVSTNLQDIAEEVEKI  248 (365)
Q Consensus       174 ~~~~~~~~g~~vlI~G~g~~G~~ai~~l~~~~g~~~vi~v~~~~~~~~~~~~----~g~~-~~~~~~~~~~~~~~~i~~~  248 (365)
                      ++...++++++||-.|+|. |..+.. +++..|. .+++++.+++..+.+++    .|.. .+.....+..++       
T Consensus        65 ~~~~~~~~~~~vLDiGcG~-G~~~~~-la~~~~~-~v~gvD~s~~~~~~a~~~~~~~~~~~~v~~~~~d~~~~-------  134 (302)
T 3hem_A           65 LDKLNLEPGMTLLDIGCGW-GSTMRH-AVAEYDV-NVIGLTLSENQYAHDKAMFDEVDSPRRKEVRIQGWEEF-------  134 (302)
T ss_dssp             HHTTCCCTTCEEEEETCTT-SHHHHH-HHHHHCC-EEEEEECCHHHHHHHHHHHHHSCCSSCEEEEECCGGGC-------
T ss_pred             HHHcCCCCcCEEEEeeccC-cHHHHH-HHHhCCC-EEEEEECCHHHHHHHHHHHHhcCCCCceEEEECCHHHc-------
Confidence            3566789999999999875 777777 7777686 79999999987766654    3433 121111221111       


Q ss_pred             HHHhCCCceEEEeCCC-----C----------HHHHHHHHHhcccCCEEEEEcc
Q 017868          249 QKAMGTGIDVSFDCAG-----L----------NKTMSTALGATCAGGKVCLVGM  287 (365)
Q Consensus       249 ~~~~~~~~d~vid~~g-----~----------~~~~~~~~~~l~~~G~~~~~g~  287 (365)
                          .+.+|+|+....     .          ...+..+.++|+++|.+++...
T Consensus       135 ----~~~fD~v~~~~~~~~~~d~~~~~~~~~~~~~l~~~~~~LkpgG~l~i~~~  184 (302)
T 3hem_A          135 ----DEPVDRIVSLGAFEHFADGAGDAGFERYDTFFKKFYNLTPDDGRMLLHTI  184 (302)
T ss_dssp             ----CCCCSEEEEESCGGGTTCCSSCCCTTHHHHHHHHHHHSSCTTCEEEEEEE
T ss_pred             ----CCCccEEEEcchHHhcCccccccchhHHHHHHHHHHHhcCCCcEEEEEEE
Confidence                468999987322     1          2567788899999999998754

>4dyv_A Short-chain dehydrogenase/reductase SDR; structural genomics, PSI-biology, NEW YORK structural genomi research consortium, nysgrc; 1.80A {Xanthobacter autotrophicus}

Probab=96.27  E-value=0.026  Score=48.67  Aligned_cols=82  Identities=20%  Similarity=0.260  Sum_probs=51.5

Q ss_pred             CCCEEEEEcC-CHHHHHHHHHHHHHCCCCeEEEEeCChhHHH-HHHHcCCC-EEEeCCC-CcccHHHHHHHHHHHhCCCc
Q 017868          181 PETNVLIMGA-GPIGLVTMLGAPRAFGAPRIVIVDVDDYRLS-VAKEIGAD-NIVKVST-NLQDIAEEVEKIQKAMGTGI  256 (365)
Q Consensus       181 ~g~~vlI~G~-g~~G~~ai~~l~~~~g~~~vi~v~~~~~~~~-~~~~~g~~-~~~~~~~-~~~~~~~~i~~~~~~~~~~~  256 (365)
                      .+.++||+|+ +++|.++++.++ ..|+ .|+.++++.++.+ ..++++.. ..+..+- +.++..+.++++.+.. +++
T Consensus        27 ~~k~~lVTGas~GIG~aia~~la-~~G~-~V~~~~r~~~~~~~~~~~~~~~~~~~~~Dv~d~~~v~~~~~~~~~~~-g~i  103 (272)
T 4dyv_A           27 GKKIAIVTGAGSGVGRAVAVALA-GAGY-GVALAGRRLDALQETAAEIGDDALCVPTDVTDPDSVRALFTATVEKF-GRV  103 (272)
T ss_dssp             -CCEEEETTTTSHHHHHHHHHHH-HTTC-EEEEEESCHHHHHHHHHHHTSCCEEEECCTTSHHHHHHHHHHHHHHH-SCC
T ss_pred             CCCEEEEeCCCcHHHHHHHHHHH-HCCC-EEEEEECCHHHHHHHHHHhCCCeEEEEecCCCHHHHHHHHHHHHHHc-CCC
Confidence            5678999987 999999999555 5599 5777788877655 44555432 2222222 2233334444443332 589


Q ss_pred             eEEEeCCCC
Q 017868          257 DVSFDCAGL  265 (365)
Q Consensus       257 d~vid~~g~  265 (365)
                      |++|.++|.
T Consensus       104 D~lVnnAg~  112 (272)
T 4dyv_A          104 DVLFNNAGT  112 (272)
T ss_dssp             CEEEECCCC
T ss_pred             CEEEECCCC
Confidence            999998873

>3lyl_A 3-oxoacyl-(acyl-carrier-protein) reductase; alpha and beta protein, NAD(P)-binding rossmann fold, csgid, oxidoreductase; 1.95A {Francisella tularensis subsp} SCOP: c.2.1.2

Probab=96.27  E-value=0.04  Score=46.58  Aligned_cols=82  Identities=22%  Similarity=0.264  Sum_probs=50.6

Q ss_pred             CCCEEEEEcC-CHHHHHHHHHHHHHCCCCeEEEEeCChhHHHHH----HHcCCCE-EEeCCC-CcccHHHHHHHHHHHhC
Q 017868          181 PETNVLIMGA-GPIGLVTMLGAPRAFGAPRIVIVDVDDYRLSVA----KEIGADN-IVKVST-NLQDIAEEVEKIQKAMG  253 (365)
Q Consensus       181 ~g~~vlI~G~-g~~G~~ai~~l~~~~g~~~vi~v~~~~~~~~~~----~~~g~~~-~~~~~~-~~~~~~~~i~~~~~~~~  253 (365)
                      .+.++||+|+ +++|.++++.++ ..|+ +|+.+++++++.+.+    ++.+... .+..+- +.+++.+.++++.+ ..
T Consensus         4 ~~k~vlITGas~gIG~~~a~~l~-~~G~-~v~~~~r~~~~~~~~~~~~~~~~~~~~~~~~D~~~~~~~~~~~~~~~~-~~   80 (247)
T 3lyl_A            4 NEKVALVTGASRGIGFEVAHALA-SKGA-TVVGTATSQASAEKFENSMKEKGFKARGLVLNISDIESIQNFFAEIKA-EN   80 (247)
T ss_dssp             TTCEEEESSCSSHHHHHHHHHHH-HTTC-EEEEEESSHHHHHHHHHHHHHTTCCEEEEECCTTCHHHHHHHHHHHHH-TT
T ss_pred             CCCEEEEECCCChHHHHHHHHHH-HCCC-EEEEEeCCHHHHHHHHHHHHhcCCceEEEEecCCCHHHHHHHHHHHHH-Hc
Confidence            4678999987 999999999555 5599 577777877665432    3334332 222222 22333333444433 24


Q ss_pred             CCceEEEeCCCC
Q 017868          254 TGIDVSFDCAGL  265 (365)
Q Consensus       254 ~~~d~vid~~g~  265 (365)
                      +++|++|.++|.
T Consensus        81 ~~id~li~~Ag~   92 (247)
T 3lyl_A           81 LAIDILVNNAGI   92 (247)
T ss_dssp             CCCSEEEECCCC
T ss_pred             CCCCEEEECCCC
Confidence            579999999873

>3tfo_A Putative 3-oxoacyl-(acyl-carrier-protein) reducta; structural genomics, PSI-biology, NEW YORK structural genomi research consortium; 2.08A {Sinorhizobium meliloti}

Probab=96.27  E-value=0.022  Score=48.90  Aligned_cols=81  Identities=22%  Similarity=0.257  Sum_probs=50.1

Q ss_pred             CCCEEEEEcC-CHHHHHHHHHHHHHCCCCeEEEEeCChhHHHHH-H---HcCCCE-EEeCCC-CcccHHHHHHHHHHHhC
Q 017868          181 PETNVLIMGA-GPIGLVTMLGAPRAFGAPRIVIVDVDDYRLSVA-K---EIGADN-IVKVST-NLQDIAEEVEKIQKAMG  253 (365)
Q Consensus       181 ~g~~vlI~G~-g~~G~~ai~~l~~~~g~~~vi~v~~~~~~~~~~-~---~~g~~~-~~~~~~-~~~~~~~~i~~~~~~~~  253 (365)
                      .+.++||+|+ +++|.++++.++ ..|+ +|+.+++++++.+.+ +   +.+... .+..+- +.++....++++.+. .
T Consensus         3 ~~k~~lVTGas~GIG~aia~~la-~~G~-~V~~~~r~~~~~~~~~~~l~~~~~~~~~~~~Dv~d~~~v~~~~~~~~~~-~   79 (264)
T 3tfo_A            3 MDKVILITGASGGIGEGIARELG-VAGA-KILLGARRQARIEAIATEIRDAGGTALAQVLDVTDRHSVAAFAQAAVDT-W   79 (264)
T ss_dssp             TTCEEEESSTTSHHHHHHHHHHH-HTTC-EEEEEESSHHHHHHHHHHHHHTTCEEEEEECCTTCHHHHHHHHHHHHHH-H
T ss_pred             CCCEEEEeCCccHHHHHHHHHHH-HCCC-EEEEEECCHHHHHHHHHHHHhcCCcEEEEEcCCCCHHHHHHHHHHHHHH-c
Confidence            4678999987 999999999554 5699 577778887765432 2   234322 222222 223333344444332 2


Q ss_pred             CCceEEEeCCC
Q 017868          254 TGIDVSFDCAG  264 (365)
Q Consensus       254 ~~~d~vid~~g  264 (365)
                      +++|++|.++|
T Consensus        80 g~iD~lVnnAG   90 (264)
T 3tfo_A           80 GRIDVLVNNAG   90 (264)
T ss_dssp             SCCCEEEECCC
T ss_pred             CCCCEEEECCC
Confidence            57999999987

>2jah_A Clavulanic acid dehydrogenase; short-chain dehydrogenase/reductase, lactamase inhibitor, AN biosynthesis, NADPH, oxidoreductase; HET: MSE NDP; 1.80A {Streptomyces clavuligerus} PDB: 2jap_A*

Probab=96.27  E-value=0.042  Score=46.58  Aligned_cols=81  Identities=27%  Similarity=0.328  Sum_probs=49.8

Q ss_pred             CCCEEEEEcC-CHHHHHHHHHHHHHCCCCeEEEEeCChhHHHHH-HH---cCCCE-EEeCCC-CcccHHHHHHHHHHHhC
Q 017868          181 PETNVLIMGA-GPIGLVTMLGAPRAFGAPRIVIVDVDDYRLSVA-KE---IGADN-IVKVST-NLQDIAEEVEKIQKAMG  253 (365)
Q Consensus       181 ~g~~vlI~G~-g~~G~~ai~~l~~~~g~~~vi~v~~~~~~~~~~-~~---~g~~~-~~~~~~-~~~~~~~~i~~~~~~~~  253 (365)
                      .+.++||+|+ |++|.++++.++ ..|+ .|+.+++++++.+.+ ++   .+... .+..+- +.+++...+++..+. -
T Consensus         6 ~~k~~lVTGas~gIG~aia~~l~-~~G~-~V~~~~r~~~~~~~~~~~l~~~~~~~~~~~~Dv~~~~~~~~~~~~~~~~-~   82 (247)
T 2jah_A            6 QGKVALITGASSGIGEATARALA-AEGA-AVAIAARRVEKLRALGDELTAAGAKVHVLELDVADRQGVDAAVASTVEA-L   82 (247)
T ss_dssp             TTCEEEEESCSSHHHHHHHHHHH-HTTC-EEEEEESCHHHHHHHHHHHHHTTCCEEEEECCTTCHHHHHHHHHHHHHH-H
T ss_pred             CCCEEEEECCCCHHHHHHHHHHH-HCCC-EEEEEECCHHHHHHHHHHHHhcCCcEEEEECCCCCHHHHHHHHHHHHHH-c
Confidence            4678999987 999999999555 5599 577777877665432 22   24322 222222 223333334433332 2


Q ss_pred             CCceEEEeCCC
Q 017868          254 TGIDVSFDCAG  264 (365)
Q Consensus       254 ~~~d~vid~~g  264 (365)
                      +++|++|.++|
T Consensus        83 g~id~lv~nAg   93 (247)
T 2jah_A           83 GGLDILVNNAG   93 (247)
T ss_dssp             SCCSEEEECCC
T ss_pred             CCCCEEEECCC
Confidence            57999999887

>3r1i_A Short-chain type dehydrogenase/reductase; structural genomics, seattle structural genomics center for infectious disease, ssgcid; 1.95A {Mycobacterium marinum}

Probab=96.26  E-value=0.031  Score=48.29  Aligned_cols=81  Identities=21%  Similarity=0.338  Sum_probs=50.0

Q ss_pred             CCCEEEEEcC-CHHHHHHHHHHHHHCCCCeEEEEeCChhHHHH----HHHcCCC-EEEeCCC-CcccHHHHHHHHHHHhC
Q 017868          181 PETNVLIMGA-GPIGLVTMLGAPRAFGAPRIVIVDVDDYRLSV----AKEIGAD-NIVKVST-NLQDIAEEVEKIQKAMG  253 (365)
Q Consensus       181 ~g~~vlI~G~-g~~G~~ai~~l~~~~g~~~vi~v~~~~~~~~~----~~~~g~~-~~~~~~~-~~~~~~~~i~~~~~~~~  253 (365)
                      .+.++||+|+ +++|.++++.++ ..|+ +|+.+++++++.+.    +++.+.. ..+..+- +.+++.+.++++.+.. 
T Consensus        31 ~gk~~lVTGas~GIG~aia~~la-~~G~-~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~Dl~d~~~v~~~~~~~~~~~-  107 (276)
T 3r1i_A           31 SGKRALITGASTGIGKKVALAYA-EAGA-QVAVAARHSDALQVVADEIAGVGGKALPIRCDVTQPDQVRGMLDQMTGEL-  107 (276)
T ss_dssp             TTCEEEEESTTSHHHHHHHHHHH-HTTC-EEEEEESSGGGGHHHHHHHHHTTCCCEEEECCTTCHHHHHHHHHHHHHHH-
T ss_pred             CCCEEEEeCCCCHHHHHHHHHHH-HCCC-EEEEEeCCHHHHHHHHHHHHhcCCeEEEEEcCCCCHHHHHHHHHHHHHHc-
Confidence            5689999987 999999999555 5599 57777777665432    2233322 2232222 2233444444443333 


Q ss_pred             CCceEEEeCCC
Q 017868          254 TGIDVSFDCAG  264 (365)
Q Consensus       254 ~~~d~vid~~g  264 (365)
                      +++|++|.++|
T Consensus       108 g~iD~lvnnAg  118 (276)
T 3r1i_A          108 GGIDIAVCNAG  118 (276)
T ss_dssp             SCCSEEEECCC
T ss_pred             CCCCEEEECCC
Confidence            47999999887

>1xg5_A ARPG836; short chain dehydrogenase, human, SGC, structural genomics, structural genomics consortium, oxidoreductase; HET: NAP; 1.53A {Homo sapiens} SCOP: c.2.1.2

Probab=96.26  E-value=0.029  Score=48.48  Aligned_cols=81  Identities=21%  Similarity=0.275  Sum_probs=49.1

Q ss_pred             CCCEEEEEcC-CHHHHHHHHHHHHHCCCCeEEEEeCChhHHHHH----HHcCC-CE--EEeCCCC-cccHHHHHHHHHHH
Q 017868          181 PETNVLIMGA-GPIGLVTMLGAPRAFGAPRIVIVDVDDYRLSVA----KEIGA-DN--IVKVSTN-LQDIAEEVEKIQKA  251 (365)
Q Consensus       181 ~g~~vlI~G~-g~~G~~ai~~l~~~~g~~~vi~v~~~~~~~~~~----~~~g~-~~--~~~~~~~-~~~~~~~i~~~~~~  251 (365)
                      .+.++||+|+ |++|.++++.++ ..|+ .|++++++.++.+.+    +..+. ..  .+..+-. .+++.+.++++.+.
T Consensus        31 ~~k~vlVTGasggIG~~la~~l~-~~G~-~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~~Dl~~~~~v~~~~~~~~~~  108 (279)
T 1xg5_A           31 RDRLALVTGASGGIGAAVARALV-QQGL-KVVGCARTVGNIEELAAECKSAGYPGTLIPYRCDLSNEEDILSMFSAIRSQ  108 (279)
T ss_dssp             TTCEEEEESTTSHHHHHHHHHHH-HTTC-EEEEEESCHHHHHHHHHHHHHTTCSSEEEEEECCTTCHHHHHHHHHHHHHH
T ss_pred             CCCEEEEECCCchHHHHHHHHHH-HCCC-EEEEEECChHHHHHHHHHHHhcCCCceEEEEEecCCCHHHHHHHHHHHHHh
Confidence            4678999987 999999999555 5698 577777877665432    23332 11  2222222 22333333333332


Q ss_pred             hCCCceEEEeCCC
Q 017868          252 MGTGIDVSFDCAG  264 (365)
Q Consensus       252 ~~~~~d~vid~~g  264 (365)
                       .+++|++|.++|
T Consensus       109 -~g~iD~vi~~Ag  120 (279)
T 1xg5_A          109 -HSGVDICINNAG  120 (279)
T ss_dssp             -HCCCSEEEECCC
T ss_pred             -CCCCCEEEECCC
Confidence             247999999887

>3tjr_A Short chain dehydrogenase; structural genomics, seattle structural genomics center for infectious disease, ssgcid, SCD, NAD; HET: UNL; 1.60A {Mycobacterium avium subsp}

Probab=96.26  E-value=0.034  Score=48.72  Aligned_cols=82  Identities=29%  Similarity=0.368  Sum_probs=51.2

Q ss_pred             CCCCEEEEEcC-CHHHHHHHHHHHHHCCCCeEEEEeCChhHHHHH-H---HcCCCE-EEeCCC-CcccHHHHHHHHHHHh
Q 017868          180 GPETNVLIMGA-GPIGLVTMLGAPRAFGAPRIVIVDVDDYRLSVA-K---EIGADN-IVKVST-NLQDIAEEVEKIQKAM  252 (365)
Q Consensus       180 ~~g~~vlI~G~-g~~G~~ai~~l~~~~g~~~vi~v~~~~~~~~~~-~---~~g~~~-~~~~~~-~~~~~~~~i~~~~~~~  252 (365)
                      -.|.++||+|+ +++|.+++..++ ..|+ .|+.+++++++.+.+ +   ..+... .+..+- +.+++.+.++++.+. 
T Consensus        29 l~gk~vlVTGas~gIG~~la~~l~-~~G~-~V~~~~r~~~~~~~~~~~l~~~~~~~~~~~~Dv~d~~~v~~~~~~~~~~-  105 (301)
T 3tjr_A           29 FDGRAAVVTGGASGIGLATATEFA-RRGA-RLVLSDVDQPALEQAVNGLRGQGFDAHGVVCDVRHLDEMVRLADEAFRL-  105 (301)
T ss_dssp             STTCEEEEETTTSHHHHHHHHHHH-HTTC-EEEEEESCHHHHHHHHHHHHHTTCCEEEEECCTTCHHHHHHHHHHHHHH-
T ss_pred             cCCCEEEEeCCCCHHHHHHHHHHH-HCCC-EEEEEECCHHHHHHHHHHHHhcCCceEEEEccCCCHHHHHHHHHHHHHh-
Confidence            36789999987 999999999555 5698 577788887765432 2   234322 222222 223333334443332 


Q ss_pred             CCCceEEEeCCC
Q 017868          253 GTGIDVSFDCAG  264 (365)
Q Consensus       253 ~~~~d~vid~~g  264 (365)
                      .+++|++|.++|
T Consensus       106 ~g~id~lvnnAg  117 (301)
T 3tjr_A          106 LGGVDVVFSNAG  117 (301)
T ss_dssp             HSSCSEEEECCC
T ss_pred             CCCCCEEEECCC
Confidence            258999999988

>3zv4_A CIS-2,3-dihydrobiphenyl-2,3-DIOL dehydrogenase; oxidoreductase, short chain dehydrogenase/oxidoreductase, SD comamonas testosteroni; 1.80A {Pandoraea pnomenusa} SCOP: c.2.1.2 PDB: 2y99_A* 3zv3_A 2y93_A 3zv5_A* 3zv6_A* 1bdb_A*

Probab=96.25  E-value=0.033  Score=48.30  Aligned_cols=82  Identities=27%  Similarity=0.305  Sum_probs=52.8

Q ss_pred             CCCEEEEEcC-CHHHHHHHHHHHHHCCCCeEEEEeCChhHHHHH-HHcCCCEE-EeCCC-CcccHHHHHHHHHHHhCCCc
Q 017868          181 PETNVLIMGA-GPIGLVTMLGAPRAFGAPRIVIVDVDDYRLSVA-KEIGADNI-VKVST-NLQDIAEEVEKIQKAMGTGI  256 (365)
Q Consensus       181 ~g~~vlI~G~-g~~G~~ai~~l~~~~g~~~vi~v~~~~~~~~~~-~~~g~~~~-~~~~~-~~~~~~~~i~~~~~~~~~~~  256 (365)
                      .|+++||+|+ +++|.++++.++ ..|+ +|+.++++.++.+.+ ++++.... +..+- +.++....++++.+.. +++
T Consensus         4 ~gk~~lVTGas~GIG~aia~~la-~~G~-~V~~~~r~~~~~~~~~~~~~~~~~~~~~Dv~~~~~v~~~~~~~~~~~-g~i   80 (281)
T 3zv4_A            4 TGEVALITGGASGLGRALVDRFV-AEGA-RVAVLDKSAERLRELEVAHGGNAVGVVGDVRSLQDQKRAAERCLAAF-GKI   80 (281)
T ss_dssp             TTCEEEEETCSSHHHHHHHHHHH-HTTC-EEEEEESCHHHHHHHHHHTBTTEEEEECCTTCHHHHHHHHHHHHHHH-SCC
T ss_pred             CCCEEEEECCCcHHHHHHHHHHH-HCcC-EEEEEeCCHHHHHHHHHHcCCcEEEEEcCCCCHHHHHHHHHHHHHhc-CCC
Confidence            4678999987 999999999555 5599 677788888776543 45554322 22222 2233344444443332 589


Q ss_pred             eEEEeCCCC
Q 017868          257 DVSFDCAGL  265 (365)
Q Consensus       257 d~vid~~g~  265 (365)
                      |+++.++|.
T Consensus        81 D~lvnnAg~   89 (281)
T 3zv4_A           81 DTLIPNAGI   89 (281)
T ss_dssp             CEEECCCCC
T ss_pred             CEEEECCCc
Confidence            999998873

>3v8b_A Putative dehydrogenase, possibly 3-oxoacyl-[acyl- protein] reductase; PSI-biology, structural genomics, protein structure initiati nysgrc; 2.70A {Sinorhizobium meliloti}

Probab=96.25  E-value=0.036  Score=48.11  Aligned_cols=82  Identities=23%  Similarity=0.302  Sum_probs=51.1

Q ss_pred             CCCEEEEEcC-CHHHHHHHHHHHHHCCCCeEEEEeCChhHHHH-HHHc---CCCE-EEeCCC-CcccHHHHHHHHHHHhC
Q 017868          181 PETNVLIMGA-GPIGLVTMLGAPRAFGAPRIVIVDVDDYRLSV-AKEI---GADN-IVKVST-NLQDIAEEVEKIQKAMG  253 (365)
Q Consensus       181 ~g~~vlI~G~-g~~G~~ai~~l~~~~g~~~vi~v~~~~~~~~~-~~~~---g~~~-~~~~~~-~~~~~~~~i~~~~~~~~  253 (365)
                      ++.++||+|+ +++|.++++.++ ..|+ +|+.++++.++.+. .+++   +... .+..+- +.++....++++.+. .
T Consensus        27 ~~k~~lVTGas~GIG~aia~~la-~~G~-~V~~~~r~~~~~~~~~~~l~~~~~~~~~~~~Dv~d~~~v~~~~~~~~~~-~  103 (283)
T 3v8b_A           27 PSPVALITGAGSGIGRATALALA-ADGV-TVGALGRTRTEVEEVADEIVGAGGQAIALEADVSDELQMRNAVRDLVLK-F  103 (283)
T ss_dssp             CCCEEEEESCSSHHHHHHHHHHH-HTTC-EEEEEESSHHHHHHHHHHHTTTTCCEEEEECCTTCHHHHHHHHHHHHHH-H
T ss_pred             CCCEEEEECCCCHHHHHHHHHHH-HCCC-EEEEEeCCHHHHHHHHHHHHhcCCcEEEEEccCCCHHHHHHHHHHHHHH-h
Confidence            5678999987 999999999555 5599 67777788776543 3333   3222 222222 223334444444333 2


Q ss_pred             CCceEEEeCCCC
Q 017868          254 TGIDVSFDCAGL  265 (365)
Q Consensus       254 ~~~d~vid~~g~  265 (365)
                      +++|++|.++|.
T Consensus       104 g~iD~lVnnAg~  115 (283)
T 3v8b_A          104 GHLDIVVANAGI  115 (283)
T ss_dssp             SCCCEEEECCCC
T ss_pred             CCCCEEEECCCC
Confidence            589999998873

>1iy8_A Levodione reductase; oxidoreductase; HET: NAD; 1.60A {Leifsonia aquatica} SCOP: c.2.1.2

Probab=96.25  E-value=0.041  Score=47.22  Aligned_cols=81  Identities=25%  Similarity=0.335  Sum_probs=49.8

Q ss_pred             CCCEEEEEcC-CHHHHHHHHHHHHHCCCCeEEEEeCChhHHHHH-HHc-----CCCE-EEeCCC-CcccHHHHHHHHHHH
Q 017868          181 PETNVLIMGA-GPIGLVTMLGAPRAFGAPRIVIVDVDDYRLSVA-KEI-----GADN-IVKVST-NLQDIAEEVEKIQKA  251 (365)
Q Consensus       181 ~g~~vlI~G~-g~~G~~ai~~l~~~~g~~~vi~v~~~~~~~~~~-~~~-----g~~~-~~~~~~-~~~~~~~~i~~~~~~  251 (365)
                      .+.++||+|+ +++|.++++.++ ..|+ .|+.+++++++.+.+ +++     +... .+..+- +.+++.+.+++..+.
T Consensus        12 ~~k~vlVTGas~gIG~~ia~~l~-~~G~-~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~~D~~~~~~v~~~~~~~~~~   89 (267)
T 1iy8_A           12 TDRVVLITGGGSGLGRATAVRLA-AEGA-KLSLVDVSSEGLEASKAAVLETAPDAEVLTTVADVSDEAQVEAYVTATTER   89 (267)
T ss_dssp             TTCEEEEETTTSHHHHHHHHHHH-HTTC-EEEEEESCHHHHHHHHHHHHHHCTTCCEEEEECCTTSHHHHHHHHHHHHHH
T ss_pred             CCCEEEEECCCCHHHHHHHHHHH-HCCC-EEEEEeCCHHHHHHHHHHHHhhcCCceEEEEEccCCCHHHHHHHHHHHHHH
Confidence            4678999987 999999999555 5598 577777877665432 222     3322 222222 223333444444332


Q ss_pred             hCCCceEEEeCCC
Q 017868          252 MGTGIDVSFDCAG  264 (365)
Q Consensus       252 ~~~~~d~vid~~g  264 (365)
                      . +++|++|.++|
T Consensus        90 ~-g~id~lv~nAg  101 (267)
T 1iy8_A           90 F-GRIDGFFNNAG  101 (267)
T ss_dssp             H-SCCSEEEECCC
T ss_pred             c-CCCCEEEECCC
Confidence            2 47999999887

>1c1d_A L-phenylalanine dehydrogenase; amino acid dehydrogenase, oxidative deamination mechanism, oxidoreductase; HET: PHE NAD; 1.25A {Rhodococcus SP} SCOP: c.2.1.7 c.58.1.1 PDB: 1bw9_A* 1c1x_A* 1bw9_B* 1c1d_B* 1c1x_B* 1bxg_B* 1bxg_A*

Probab=96.25  E-value=0.038  Score=49.36  Aligned_cols=49  Identities=24%  Similarity=0.349  Sum_probs=40.9

Q ss_pred             CCCCEEEEEcCCHHHHHHHHHHHHHCCCCeEEEEeCChhHHHHHHHcCCCE
Q 017868          180 GPETNVLIMGAGPIGLVTMLGAPRAFGAPRIVIVDVDDYRLSVAKEIGADN  230 (365)
Q Consensus       180 ~~g~~vlI~G~g~~G~~ai~~l~~~~g~~~vi~v~~~~~~~~~~~~~g~~~  230 (365)
                      -+|++|.|.|.|.+|+.+++ .++.+|+ +|++.+.+..+.++++++++..
T Consensus       173 L~GktV~I~G~GnVG~~~A~-~l~~~Ga-kVvvsD~~~~~~~~a~~~ga~~  221 (355)
T 1c1d_A          173 LDGLTVLVQGLGAVGGSLAS-LAAEAGA-QLLVADTDTERVAHAVALGHTA  221 (355)
T ss_dssp             STTCEEEEECCSHHHHHHHH-HHHHTTC-EEEEECSCHHHHHHHHHTTCEE
T ss_pred             CCCCEEEEECcCHHHHHHHH-HHHHCCC-EEEEEeCCccHHHHHHhcCCEE
Confidence            47899999999999999999 8889999 5668888877766777787643

>2rhc_B Actinorhodin polyketide ketoreductase; oxidoreductase, combinatorial biosynthesis, short chain dehydrogenase/reductase; HET: NAP EMO; 2.10A {Streptomyces coelicolor} SCOP: c.2.1.2 PDB: 2rh4_A* 1w4z_A* 3csd_B* 3qrw_A* 3ri3_B* 2rhr_B* 1x7g_A* 1x7h_A* 1xr3_A*

Probab=96.24  E-value=0.053  Score=46.79  Aligned_cols=81  Identities=22%  Similarity=0.254  Sum_probs=50.0

Q ss_pred             CCCEEEEEcC-CHHHHHHHHHHHHHCCCCeEEEEeCChhHHHH-HHH---cCCCE-EEeCCC-CcccHHHHHHHHHHHhC
Q 017868          181 PETNVLIMGA-GPIGLVTMLGAPRAFGAPRIVIVDVDDYRLSV-AKE---IGADN-IVKVST-NLQDIAEEVEKIQKAMG  253 (365)
Q Consensus       181 ~g~~vlI~G~-g~~G~~ai~~l~~~~g~~~vi~v~~~~~~~~~-~~~---~g~~~-~~~~~~-~~~~~~~~i~~~~~~~~  253 (365)
                      .+.++||+|+ |++|.++++.++ ..|+ .|+++++++++.+. .++   .+... .+..+- +.+++...++++.+. -
T Consensus        21 ~~k~vlVTGas~gIG~~ia~~l~-~~G~-~V~~~~r~~~~~~~~~~~l~~~~~~~~~~~~Dv~~~~~v~~~~~~~~~~-~   97 (277)
T 2rhc_B           21 DSEVALVTGATSGIGLEIARRLG-KEGL-RVFVCARGEEGLRTTLKELREAGVEADGRTCDVRSVPEIEALVAAVVER-Y   97 (277)
T ss_dssp             TSCEEEEETCSSHHHHHHHHHHH-HTTC-EEEEEESCHHHHHHHHHHHHHTTCCEEEEECCTTCHHHHHHHHHHHHHH-T
T ss_pred             CCCEEEEECCCCHHHHHHHHHHH-HCCC-EEEEEeCCHHHHHHHHHHHHhcCCceEEEECCCCCHHHHHHHHHHHHHH-h
Confidence            4678999987 999999999554 5698 57777788766442 222   34322 222222 223333334443332 3


Q ss_pred             CCceEEEeCCC
Q 017868          254 TGIDVSFDCAG  264 (365)
Q Consensus       254 ~~~d~vid~~g  264 (365)
                      +++|++|.++|
T Consensus        98 g~iD~lv~~Ag  108 (277)
T 2rhc_B           98 GPVDVLVNNAG  108 (277)
T ss_dssp             CSCSEEEECCC
T ss_pred             CCCCEEEECCC
Confidence            57999999887

>2gpy_A O-methyltransferase; structural genomics, PSI, protein structure initiative, NEW research center for structural genomics, nysgxrc; HET: MSE; 1.90A {Bacillus halodurans}

Probab=96.24  E-value=0.014  Score=48.94  Aligned_cols=102  Identities=20%  Similarity=0.249  Sum_probs=65.8

Q ss_pred             CCCCCCEEEEEcCCHHHHHHHHHHHHHCCCCeEEEEeCChhHHHHHHHc----CCCE-EEeCCCCcccHHHHHHHHHHHh
Q 017868          178 NIGPETNVLIMGAGPIGLVTMLGAPRAFGAPRIVIVDVDDYRLSVAKEI----GADN-IVKVSTNLQDIAEEVEKIQKAM  252 (365)
Q Consensus       178 ~~~~g~~vlI~G~g~~G~~ai~~l~~~~g~~~vi~v~~~~~~~~~~~~~----g~~~-~~~~~~~~~~~~~~i~~~~~~~  252 (365)
                      ...++++||-.|+| .|..++. +++..+...+++++.+++..+.+++.    |... +.....+..+.   +....  .
T Consensus        51 ~~~~~~~vLdiG~G-~G~~~~~-la~~~~~~~v~~vD~~~~~~~~a~~~~~~~~~~~~v~~~~~d~~~~---~~~~~--~  123 (233)
T 2gpy_A           51 KMAAPARILEIGTA-IGYSAIR-MAQALPEATIVSIERDERRYEEAHKHVKALGLESRIELLFGDALQL---GEKLE--L  123 (233)
T ss_dssp             HHHCCSEEEEECCT-TSHHHHH-HHHHCTTCEEEEECCCHHHHHHHHHHHHHTTCTTTEEEECSCGGGS---HHHHT--T
T ss_pred             hccCCCEEEEecCC-CcHHHHH-HHHHCCCCEEEEEECCHHHHHHHHHHHHHcCCCCcEEEEECCHHHH---HHhcc--c
Confidence            34678899999987 4777777 77776444899999999887766543    5421 22222222221   11110  1


Q ss_pred             CCCceEEEeCCCC---HHHHHHHHHhcccCCEEEEEc
Q 017868          253 GTGIDVSFDCAGL---NKTMSTALGATCAGGKVCLVG  286 (365)
Q Consensus       253 ~~~~d~vid~~g~---~~~~~~~~~~l~~~G~~~~~g  286 (365)
                      ...+|+|+.....   ...+..+.+.|+++|.++...
T Consensus       124 ~~~fD~I~~~~~~~~~~~~l~~~~~~L~pgG~lv~~~  160 (233)
T 2gpy_A          124 YPLFDVLFIDAAKGQYRRFFDMYSPMVRPGGLILSDN  160 (233)
T ss_dssp             SCCEEEEEEEGGGSCHHHHHHHHGGGEEEEEEEEEET
T ss_pred             CCCccEEEECCCHHHHHHHHHHHHHHcCCCeEEEEEc
Confidence            3679999875543   356678888999999998753

>3ioy_A Short-chain dehydrogenase/reductase SDR; structural genomics, oxidoreductase, PSI-2, protein structure initiative; 1.90A {Novosphingobium aromaticivorans DSM12444}

Probab=96.23  E-value=0.026  Score=49.94  Aligned_cols=81  Identities=12%  Similarity=0.212  Sum_probs=50.7

Q ss_pred             CCCEEEEEcC-CHHHHHHHHHHHHHCCCCeEEEEeCChhHHHHH-HH---cCC---CEEEeCCC-CcccHHHHHHHHHHH
Q 017868          181 PETNVLIMGA-GPIGLVTMLGAPRAFGAPRIVIVDVDDYRLSVA-KE---IGA---DNIVKVST-NLQDIAEEVEKIQKA  251 (365)
Q Consensus       181 ~g~~vlI~G~-g~~G~~ai~~l~~~~g~~~vi~v~~~~~~~~~~-~~---~g~---~~~~~~~~-~~~~~~~~i~~~~~~  251 (365)
                      .+.++||+|+ |++|.+++..++ ..|+ .|+.++++.++.+.+ +.   .+.   ...+..+- +..++...+..+.+.
T Consensus         7 ~~k~vlVTGas~gIG~~la~~l~-~~G~-~Vv~~~r~~~~~~~~~~~l~~~~~~~~~~~~~~Dl~~~~~v~~~~~~~~~~   84 (319)
T 3ioy_A            7 AGRTAFVTGGANGVGIGLVRQLL-NQGC-KVAIADIRQDSIDKALATLEAEGSGPEVMGVQLDVASREGFKMAADEVEAR   84 (319)
T ss_dssp             TTCEEEEETTTSTHHHHHHHHHH-HTTC-EEEEEESCHHHHHHHHHHHHHHTCGGGEEEEECCTTCHHHHHHHHHHHHHH
T ss_pred             CCCEEEEcCCchHHHHHHHHHHH-HCCC-EEEEEECCHHHHHHHHHHHHhcCCCCeEEEEECCCCCHHHHHHHHHHHHHh
Confidence            4679999987 999999999555 5699 577777887765432 22   232   12222222 223344444444332


Q ss_pred             hCCCceEEEeCCC
Q 017868          252 MGTGIDVSFDCAG  264 (365)
Q Consensus       252 ~~~~~d~vid~~g  264 (365)
                       .+++|++|.++|
T Consensus        85 -~g~id~lv~nAg   96 (319)
T 3ioy_A           85 -FGPVSILCNNAG   96 (319)
T ss_dssp             -TCCEEEEEECCC
T ss_pred             -CCCCCEEEECCC
Confidence             358999999988

>3rd5_A Mypaa.01249.C; ssgcid, structural genomics, seattle structural genomics CEN infectious disease, oxidoreductase; HET: EPE; 1.50A {Mycobacterium paratuberculosis}

Probab=96.23  E-value=0.031  Score=48.68  Aligned_cols=78  Identities=24%  Similarity=0.400  Sum_probs=50.9

Q ss_pred             CCCEEEEEcC-CHHHHHHHHHHHHHCCCCeEEEEeCChhHHHHH-HHcCCCE-EEeCCCCcccHHHHHHHHHHHhCCCce
Q 017868          181 PETNVLIMGA-GPIGLVTMLGAPRAFGAPRIVIVDVDDYRLSVA-KEIGADN-IVKVSTNLQDIAEEVEKIQKAMGTGID  257 (365)
Q Consensus       181 ~g~~vlI~G~-g~~G~~ai~~l~~~~g~~~vi~v~~~~~~~~~~-~~~g~~~-~~~~~~~~~~~~~~i~~~~~~~~~~~d  257 (365)
                      +|.++||+|+ +++|.++++.++ ..|+ +|+.+++++++.+.+ ++++... .+..+-  .+. +.++++.+.. +++|
T Consensus        15 ~gk~vlVTGas~gIG~~~a~~L~-~~G~-~V~~~~r~~~~~~~~~~~~~~~~~~~~~Dl--~d~-~~v~~~~~~~-~~iD   88 (291)
T 3rd5_A           15 AQRTVVITGANSGLGAVTARELA-RRGA-TVIMAVRDTRKGEAAARTMAGQVEVRELDL--QDL-SSVRRFADGV-SGAD   88 (291)
T ss_dssp             TTCEEEEECCSSHHHHHHHHHHH-HTTC-EEEEEESCHHHHHHHHTTSSSEEEEEECCT--TCH-HHHHHHHHTC-CCEE
T ss_pred             CCCEEEEeCCCChHHHHHHHHHH-HCCC-EEEEEECCHHHHHHHHHHhcCCeeEEEcCC--CCH-HHHHHHHHhc-CCCC
Confidence            5789999987 999999999555 5598 677788888776544 4454322 222222  222 2344444322 5899


Q ss_pred             EEEeCCC
Q 017868          258 VSFDCAG  264 (365)
Q Consensus       258 ~vid~~g  264 (365)
                      ++|.++|
T Consensus        89 ~lv~nAg   95 (291)
T 3rd5_A           89 VLINNAG   95 (291)
T ss_dssp             EEEECCC
T ss_pred             EEEECCc
Confidence            9999888

>1xq1_A Putative tropinone reducatse; structural genomics, protein structure initiative, CESG, AT1 reductively methylated protein; 2.10A {Arabidopsis thaliana} SCOP: c.2.1.2 PDB: 2q45_A

Probab=96.22  E-value=0.022  Score=48.82  Aligned_cols=83  Identities=18%  Similarity=0.269  Sum_probs=50.1

Q ss_pred             CCCEEEEEcC-CHHHHHHHHHHHHHCCCCeEEEEeCChhHHHH-HH---HcCCCE-EEeCCCC-cccHHHHHHHHHHHhC
Q 017868          181 PETNVLIMGA-GPIGLVTMLGAPRAFGAPRIVIVDVDDYRLSV-AK---EIGADN-IVKVSTN-LQDIAEEVEKIQKAMG  253 (365)
Q Consensus       181 ~g~~vlI~G~-g~~G~~ai~~l~~~~g~~~vi~v~~~~~~~~~-~~---~~g~~~-~~~~~~~-~~~~~~~i~~~~~~~~  253 (365)
                      .+.++||+|+ |++|.++++.++ ..|+ .|+.+++++++.+. .+   +.+... .+..+-. .+++.+.++++.+..+
T Consensus        13 ~~k~vlITGasggiG~~la~~l~-~~G~-~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~D~~~~~~~~~~~~~~~~~~~   90 (266)
T 1xq1_A           13 KAKTVLVTGGTKGIGHAIVEEFA-GFGA-VIHTCARNEYELNECLSKWQKKGFQVTGSVCDASLRPEREKLMQTVSSMFG   90 (266)
T ss_dssp             TTCEEEETTTTSHHHHHHHHHHH-HTTC-EEEEEESCHHHHHHHHHHHHHTTCCEEEEECCTTSHHHHHHHHHHHHHHHT
T ss_pred             CCCEEEEECCCCHHHHHHHHHHH-HCCC-EEEEEeCCHHHHHHHHHHHHhcCCeeEEEECCCCCHHHHHHHHHHHHHHhC
Confidence            4678999987 999999999554 5698 57777787765442 22   234322 2222222 2233333333333333


Q ss_pred             CCceEEEeCCCC
Q 017868          254 TGIDVSFDCAGL  265 (365)
Q Consensus       254 ~~~d~vid~~g~  265 (365)
                      +++|++|.++|.
T Consensus        91 ~~id~li~~Ag~  102 (266)
T 1xq1_A           91 GKLDILINNLGA  102 (266)
T ss_dssp             TCCSEEEEECCC
T ss_pred             CCCcEEEECCCC
Confidence            689999998874

>1hdc_A 3-alpha, 20 beta-hydroxysteroid dehydrogenase; oxidoreductase; HET: CBO; 2.20A {Streptomyces exfoliatus} SCOP: c.2.1.2 PDB: 2hsd_A*

Probab=96.22  E-value=0.036  Score=47.23  Aligned_cols=81  Identities=26%  Similarity=0.313  Sum_probs=51.0

Q ss_pred             CCCEEEEEcC-CHHHHHHHHHHHHHCCCCeEEEEeCChhHHHH-HHHcCCCE-EEeCCC-CcccHHHHHHHHHHHhCCCc
Q 017868          181 PETNVLIMGA-GPIGLVTMLGAPRAFGAPRIVIVDVDDYRLSV-AKEIGADN-IVKVST-NLQDIAEEVEKIQKAMGTGI  256 (365)
Q Consensus       181 ~g~~vlI~G~-g~~G~~ai~~l~~~~g~~~vi~v~~~~~~~~~-~~~~g~~~-~~~~~~-~~~~~~~~i~~~~~~~~~~~  256 (365)
                      .+.++||+|+ |++|.++++.++ ..|+ .|+.+++++++.+. .++++... .+..+- +.+++...++++.+.. +++
T Consensus         4 ~~k~vlVTGas~gIG~~ia~~l~-~~G~-~V~~~~r~~~~~~~~~~~~~~~~~~~~~D~~~~~~~~~~~~~~~~~~-g~i   80 (254)
T 1hdc_A            4 SGKTVIITGGARGLGAEAARQAV-AAGA-RVVLADVLDEEGAATARELGDAARYQHLDVTIEEDWQRVVAYAREEF-GSV   80 (254)
T ss_dssp             CCSEEEEETTTSHHHHHHHHHHH-HTTC-EEEEEESCHHHHHHHHHTTGGGEEEEECCTTCHHHHHHHHHHHHHHH-SCC
T ss_pred             CCCEEEEECCCcHHHHHHHHHHH-HCCC-EEEEEeCCHHHHHHHHHHhCCceeEEEecCCCHHHHHHHHHHHHHHc-CCC
Confidence            4678999987 999999999454 5699 57777788776553 44454322 222222 2233444444443322 479


Q ss_pred             eEEEeCCC
Q 017868          257 DVSFDCAG  264 (365)
Q Consensus       257 d~vid~~g  264 (365)
                      |++|.++|
T Consensus        81 D~lv~nAg   88 (254)
T 1hdc_A           81 DGLVNNAG   88 (254)
T ss_dssp             CEEEECCC
T ss_pred             CEEEECCC
Confidence            99999887

>3ucx_A Short chain dehydrogenase; ssgcid, seattle structural genomics center for infectious DI dehydrogenase, oxidoreductase; HET: 1PE; 1.85A {Mycobacterium smegmatis} SCOP: c.2.1.0

Probab=96.22  E-value=0.047  Score=46.75  Aligned_cols=83  Identities=23%  Similarity=0.209  Sum_probs=51.6

Q ss_pred             CCCCEEEEEcC-CHHHHHHHHHHHHHCCCCeEEEEeCChhHHHHH-H---HcCCCE-EEeCCC-CcccHHHHHHHHHHHh
Q 017868          180 GPETNVLIMGA-GPIGLVTMLGAPRAFGAPRIVIVDVDDYRLSVA-K---EIGADN-IVKVST-NLQDIAEEVEKIQKAM  252 (365)
Q Consensus       180 ~~g~~vlI~G~-g~~G~~ai~~l~~~~g~~~vi~v~~~~~~~~~~-~---~~g~~~-~~~~~~-~~~~~~~~i~~~~~~~  252 (365)
                      -.++++||+|+ +++|.++++.++ ..|+ +|+.++++.++.+.+ +   +.+... .+..+- +.++..+.++++.+. 
T Consensus         9 l~~k~vlVTGas~gIG~aia~~l~-~~G~-~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~Dv~~~~~v~~~~~~~~~~-   85 (264)
T 3ucx_A            9 LTDKVVVISGVGPALGTTLARRCA-EQGA-DLVLAARTVERLEDVAKQVTDTGRRALSVGTDITDDAQVAHLVDETMKA-   85 (264)
T ss_dssp             TTTCEEEEESCCTTHHHHHHHHHH-HTTC-EEEEEESCHHHHHHHHHHHHHTTCCEEEEECCTTCHHHHHHHHHHHHHH-
T ss_pred             cCCcEEEEECCCcHHHHHHHHHHH-HCcC-EEEEEeCCHHHHHHHHHHHHhcCCcEEEEEcCCCCHHHHHHHHHHHHHH-
Confidence            35789999987 899999999555 5599 577778887665432 2   334322 222222 223333444444333 


Q ss_pred             CCCceEEEeCCCC
Q 017868          253 GTGIDVSFDCAGL  265 (365)
Q Consensus       253 ~~~~d~vid~~g~  265 (365)
                      -+++|++|.++|.
T Consensus        86 ~g~id~lv~nAg~   98 (264)
T 3ucx_A           86 YGRVDVVINNAFR   98 (264)
T ss_dssp             TSCCSEEEECCCS
T ss_pred             cCCCcEEEECCCC
Confidence            3589999998863

>3k31_A Enoyl-(acyl-carrier-protein) reductase; ssgcid, NIH, niaid, SBRI, UW, decode, eonyl-(acyl-carrier-PR reductase, NAD, oxidoreductase; HET: NAD; 1.80A {Anaplasma phagocytophilum} PDB: 3k2e_A*

Probab=96.21  E-value=0.034  Score=48.63  Aligned_cols=82  Identities=11%  Similarity=0.191  Sum_probs=51.2

Q ss_pred             CCCEEEEEcC-C--HHHHHHHHHHHHHCCCCeEEEEeCChhHHH----HHHHcCCCEEEeCCCC-cccHHHHHHHHHHHh
Q 017868          181 PETNVLIMGA-G--PIGLVTMLGAPRAFGAPRIVIVDVDDYRLS----VAKEIGADNIVKVSTN-LQDIAEEVEKIQKAM  252 (365)
Q Consensus       181 ~g~~vlI~G~-g--~~G~~ai~~l~~~~g~~~vi~v~~~~~~~~----~~~~~g~~~~~~~~~~-~~~~~~~i~~~~~~~  252 (365)
                      .+.++||+|+ |  ++|.++++.++ ..|+ +|+.++++++..+    ..++.+....+..+-. .++..+.++++.+..
T Consensus        29 ~~k~vlVTGasg~~GIG~~ia~~la-~~G~-~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~Dv~d~~~v~~~~~~~~~~~  106 (296)
T 3k31_A           29 EGKKGVIIGVANDKSLAWGIAKAVC-AQGA-EVALTYLSETFKKRVDPLAESLGVKLTVPCDVSDAESVDNMFKVLAEEW  106 (296)
T ss_dssp             TTCEEEEECCCSTTSHHHHHHHHHH-HTTC-EEEEEESSGGGHHHHHHHHHHHTCCEEEECCTTCHHHHHHHHHHHHHHH
T ss_pred             CCCEEEEEeCCCCCCHHHHHHHHHH-HCCC-EEEEEeCChHHHHHHHHHHHhcCCeEEEEcCCCCHHHHHHHHHHHHHHc
Confidence            5789999987 5  89999999555 5599 5777777764433    3344454444433322 233444444443332


Q ss_pred             CCCceEEEeCCCC
Q 017868          253 GTGIDVSFDCAGL  265 (365)
Q Consensus       253 ~~~~d~vid~~g~  265 (365)
                       +++|++|.++|.
T Consensus       107 -g~iD~lVnnAG~  118 (296)
T 3k31_A          107 -GSLDFVVHAVAF  118 (296)
T ss_dssp             -SCCSEEEECCCC
T ss_pred             -CCCCEEEECCCc
Confidence             589999998873

>3ai3_A NADPH-sorbose reductase; rossmann-fold, NADPH-dependent reductase, short chain dehydrogenase/reductase, oxidoreductase; HET: NAP SOL SOE; 1.80A {Gluconobacter frateurii} PDB: 3ai2_A* 3ai1_A*

Probab=96.20  E-value=0.046  Score=46.74  Aligned_cols=81  Identities=28%  Similarity=0.391  Sum_probs=49.7

Q ss_pred             CCCEEEEEcC-CHHHHHHHHHHHHHCCCCeEEEEeCChhHHHH-HHHc----CCCE-EEeCCC-CcccHHHHHHHHHHHh
Q 017868          181 PETNVLIMGA-GPIGLVTMLGAPRAFGAPRIVIVDVDDYRLSV-AKEI----GADN-IVKVST-NLQDIAEEVEKIQKAM  252 (365)
Q Consensus       181 ~g~~vlI~G~-g~~G~~ai~~l~~~~g~~~vi~v~~~~~~~~~-~~~~----g~~~-~~~~~~-~~~~~~~~i~~~~~~~  252 (365)
                      ++.++||+|+ |++|.++++.++ ..|+ .|+.+++++++.+. .+++    +... .+..+- +.+++.+.++++.+..
T Consensus         6 ~~k~vlVTGas~gIG~~ia~~l~-~~G~-~V~~~~r~~~~~~~~~~~l~~~~~~~~~~~~~D~~~~~~~~~~~~~~~~~~   83 (263)
T 3ai3_A            6 SGKVAVITGSSSGIGLAIAEGFA-KEGA-HIVLVARQVDRLHEAARSLKEKFGVRVLEVAVDVATPEGVDAVVESVRSSF   83 (263)
T ss_dssp             TTCEEEEESCSSHHHHHHHHHHH-HTTC-EEEEEESCHHHHHHHHHHHHHHHCCCEEEEECCTTSHHHHHHHHHHHHHHH
T ss_pred             CCCEEEEECCCchHHHHHHHHHH-HCCC-EEEEEcCCHHHHHHHHHHHHHhcCCceEEEEcCCCCHHHHHHHHHHHHHHc
Confidence            4678999987 999999999554 5698 57777788766543 2222    4322 222222 2233333344333322


Q ss_pred             CCCceEEEeCCC
Q 017868          253 GTGIDVSFDCAG  264 (365)
Q Consensus       253 ~~~~d~vid~~g  264 (365)
                       +++|++|.++|
T Consensus        84 -g~id~lv~~Ag   94 (263)
T 3ai3_A           84 -GGADILVNNAG   94 (263)
T ss_dssp             -SSCSEEEECCC
T ss_pred             -CCCCEEEECCC
Confidence             47999999887

>2b4q_A Rhamnolipids biosynthesis 3-oxoacyl-[acyl- carrier-protein] reductase; RHLG-NADP complex, oxidoreductase; HET: NAP; 2.30A {Pseudomonas aeruginosa}

Probab=96.20  E-value=0.041  Score=47.51  Aligned_cols=81  Identities=20%  Similarity=0.272  Sum_probs=49.4

Q ss_pred             CCCEEEEEcC-CHHHHHHHHHHHHHCCCCeEEEEeCChhHHH-HHHHcCC--C-EEEeCCC-CcccHHHHHHHHHHHhCC
Q 017868          181 PETNVLIMGA-GPIGLVTMLGAPRAFGAPRIVIVDVDDYRLS-VAKEIGA--D-NIVKVST-NLQDIAEEVEKIQKAMGT  254 (365)
Q Consensus       181 ~g~~vlI~G~-g~~G~~ai~~l~~~~g~~~vi~v~~~~~~~~-~~~~~g~--~-~~~~~~~-~~~~~~~~i~~~~~~~~~  254 (365)
                      .+.++||+|+ |++|.++++.++ ..|+ .|+.+++++++.+ ..+++..  . ..+..+- +.+++.+.++++.+. -+
T Consensus        28 ~~k~vlVTGas~gIG~aia~~L~-~~G~-~V~~~~r~~~~~~~~~~~l~~~~~~~~~~~Dv~d~~~v~~~~~~~~~~-~g  104 (276)
T 2b4q_A           28 AGRIALVTGGSRGIGQMIAQGLL-EAGA-RVFICARDAEACADTATRLSAYGDCQAIPADLSSEAGARRLAQALGEL-SA  104 (276)
T ss_dssp             TTCEEEEETTTSHHHHHHHHHHH-HTTC-EEEEECSCHHHHHHHHHHHTTSSCEEECCCCTTSHHHHHHHHHHHHHH-CS
T ss_pred             CCCEEEEeCCCChHHHHHHHHHH-HCCC-EEEEEeCCHHHHHHHHHHHHhcCceEEEEeeCCCHHHHHHHHHHHHHh-cC
Confidence            4678999987 999999999554 5698 5777888876654 3343321  1 1121121 122333333333332 35


Q ss_pred             CceEEEeCCC
Q 017868          255 GIDVSFDCAG  264 (365)
Q Consensus       255 ~~d~vid~~g  264 (365)
                      ++|++|.++|
T Consensus       105 ~iD~lvnnAg  114 (276)
T 2b4q_A          105 RLDILVNNAG  114 (276)
T ss_dssp             CCSEEEECCC
T ss_pred             CCCEEEECCC
Confidence            8999999887

>3rih_A Short chain dehydrogenase or reductase; structural genomics, seattle structural genomics center for infectious disease, ssgcid; HET: PG5; 2.15A {Mycobacterium abscessus}

Probab=96.20  E-value=0.022  Score=49.78  Aligned_cols=81  Identities=25%  Similarity=0.258  Sum_probs=49.9

Q ss_pred             CCCEEEEEcC-CHHHHHHHHHHHHHCCCCeEEEEeCChhHHH-HHHHc---CC--CEEEeCCCC-cccHHHHHHHHHHHh
Q 017868          181 PETNVLIMGA-GPIGLVTMLGAPRAFGAPRIVIVDVDDYRLS-VAKEI---GA--DNIVKVSTN-LQDIAEEVEKIQKAM  252 (365)
Q Consensus       181 ~g~~vlI~G~-g~~G~~ai~~l~~~~g~~~vi~v~~~~~~~~-~~~~~---g~--~~~~~~~~~-~~~~~~~i~~~~~~~  252 (365)
                      .+.++||+|+ +++|.++++.++ ..|+ +|+.+++++++.+ ..+++   +.  ...+..+-. .++..+.++++.+. 
T Consensus        40 ~~k~vlVTGas~GIG~aia~~la-~~G~-~V~~~~r~~~~~~~~~~~l~~~~~~~~~~~~~Dv~d~~~v~~~~~~~~~~-  116 (293)
T 3rih_A           40 SARSVLVTGGTKGIGRGIATVFA-RAGA-NVAVAARSPRELSSVTAELGELGAGNVIGVRLDVSDPGSCADAARTVVDA-  116 (293)
T ss_dssp             TTCEEEETTTTSHHHHHHHHHHH-HTTC-EEEEEESSGGGGHHHHHHHTTSSSSCEEEEECCTTCHHHHHHHHHHHHHH-
T ss_pred             CCCEEEEeCCCcHHHHHHHHHHH-HCCC-EEEEEECCHHHHHHHHHHHHhhCCCcEEEEEEeCCCHHHHHHHHHHHHHH-
Confidence            5788999987 999999999554 5699 5777777776544 33433   21  122222222 23333344444333 


Q ss_pred             CCCceEEEeCCC
Q 017868          253 GTGIDVSFDCAG  264 (365)
Q Consensus       253 ~~~~d~vid~~g  264 (365)
                      -+++|++|.++|
T Consensus       117 ~g~iD~lvnnAg  128 (293)
T 3rih_A          117 FGALDVVCANAG  128 (293)
T ss_dssp             HSCCCEEEECCC
T ss_pred             cCCCCEEEECCC
Confidence            258999999887

>3n74_A 3-ketoacyl-(acyl-carrier-protein) reductase; seattle structural genomics center for infectious disease, S brucellosis; 2.20A {Brucella melitensis biovar abortus}

Probab=96.20  E-value=0.041  Score=46.95  Aligned_cols=81  Identities=28%  Similarity=0.300  Sum_probs=52.5

Q ss_pred             CCCEEEEEcC-CHHHHHHHHHHHHHCCCCeEEEEeCChhHHHH-HHHcCCCE-EEeCCC-CcccHHHHHHHHHHHhCCCc
Q 017868          181 PETNVLIMGA-GPIGLVTMLGAPRAFGAPRIVIVDVDDYRLSV-AKEIGADN-IVKVST-NLQDIAEEVEKIQKAMGTGI  256 (365)
Q Consensus       181 ~g~~vlI~G~-g~~G~~ai~~l~~~~g~~~vi~v~~~~~~~~~-~~~~g~~~-~~~~~~-~~~~~~~~i~~~~~~~~~~~  256 (365)
                      .+.++||+|+ +++|.++++.++ ..|+ .|+.+++++++.+. .++++... .+..+- +.++..+.++++.+.. +++
T Consensus         8 ~~k~vlITGas~gIG~~~a~~l~-~~G~-~V~~~~r~~~~~~~~~~~~~~~~~~~~~D~~~~~~~~~~~~~~~~~~-g~i   84 (261)
T 3n74_A            8 EGKVALITGAGSGFGEGMAKRFA-KGGA-KVVIVDRDKAGAERVAGEIGDAALAVAADISKEADVDAAVEAALSKF-GKV   84 (261)
T ss_dssp             TTCEEEEETTTSHHHHHHHHHHH-HTTC-EEEEEESCHHHHHHHHHHHCTTEEEEECCTTSHHHHHHHHHHHHHHH-SCC
T ss_pred             CCCEEEEECCCchHHHHHHHHHH-HCCC-EEEEEcCCHHHHHHHHHHhCCceEEEEecCCCHHHHHHHHHHHHHhc-CCC
Confidence            4678999987 999999999555 5598 57888888877654 45565432 222222 2233444444443332 479


Q ss_pred             eEEEeCCC
Q 017868          257 DVSFDCAG  264 (365)
Q Consensus       257 d~vid~~g  264 (365)
                      |++|.++|
T Consensus        85 d~li~~Ag   92 (261)
T 3n74_A           85 DILVNNAG   92 (261)
T ss_dssp             CEEEECCC
T ss_pred             CEEEECCc
Confidence            99999887

>3op4_A 3-oxoacyl-[acyl-carrier protein] reductase; 3-ketoacyl-(acyl-carrier-protein) reductase; HET: MSE NAP; 1.60A {Vibrio cholerae o1 biovar el tor} SCOP: c.2.1.2 PDB: 3rsh_A* 3rro_A* 4i08_A* 3tzk_A 3tzc_A* 3u09_A 3tzh_A 1q7b_A* 1i01_A* 1q7c_A* 2cf2_E

Probab=96.18  E-value=0.025  Score=47.98  Aligned_cols=81  Identities=19%  Similarity=0.269  Sum_probs=51.4

Q ss_pred             CCCEEEEEcC-CHHHHHHHHHHHHHCCCCeEEEEeCChhHHHHH-HHcCCC-EEEeCCC-CcccHHHHHHHHHHHhCCCc
Q 017868          181 PETNVLIMGA-GPIGLVTMLGAPRAFGAPRIVIVDVDDYRLSVA-KEIGAD-NIVKVST-NLQDIAEEVEKIQKAMGTGI  256 (365)
Q Consensus       181 ~g~~vlI~G~-g~~G~~ai~~l~~~~g~~~vi~v~~~~~~~~~~-~~~g~~-~~~~~~~-~~~~~~~~i~~~~~~~~~~~  256 (365)
                      .|+++||+|+ +++|.++++.++ ..|+ +|+.+++++++.+.+ +.++.. ..+..+- +.++..+.++++.+.. +++
T Consensus         8 ~gk~~lVTGas~gIG~a~a~~l~-~~G~-~V~~~~r~~~~~~~~~~~~~~~~~~~~~Dv~d~~~v~~~~~~~~~~~-g~i   84 (248)
T 3op4_A            8 EGKVALVTGASRGIGKAIAELLA-ERGA-KVIGTATSESGAQAISDYLGDNGKGMALNVTNPESIEAVLKAITDEF-GGV   84 (248)
T ss_dssp             TTCEEEESSCSSHHHHHHHHHHH-HTTC-EEEEEESSHHHHHHHHHHHGGGEEEEECCTTCHHHHHHHHHHHHHHH-CCC
T ss_pred             CCCEEEEeCCCCHHHHHHHHHHH-HCCC-EEEEEeCCHHHHHHHHHHhcccceEEEEeCCCHHHHHHHHHHHHHHc-CCC
Confidence            5788999987 999999999554 5699 577778887766543 444432 1222222 2233444444443332 589


Q ss_pred             eEEEeCCC
Q 017868          257 DVSFDCAG  264 (365)
Q Consensus       257 d~vid~~g  264 (365)
                      |+++.++|
T Consensus        85 D~lv~nAg   92 (248)
T 3op4_A           85 DILVNNAG   92 (248)
T ss_dssp             SEEEECCC
T ss_pred             CEEEECCC
Confidence            99999988

>3lf2_A Short chain oxidoreductase Q9HYA2; SDR, SCOR, rossmann fold; HET: NAP; 2.30A {Pseudomonas aeruginosa} PDB: 3lf1_A*

Probab=96.18  E-value=0.043  Score=47.05  Aligned_cols=81  Identities=19%  Similarity=0.184  Sum_probs=50.0

Q ss_pred             CCCEEEEEcC-CHHHHHHHHHHHHHCCCCeEEEEeCChhHHHHH-HH----cCCC--EEEeCCC-CcccHHHHHHHHHHH
Q 017868          181 PETNVLIMGA-GPIGLVTMLGAPRAFGAPRIVIVDVDDYRLSVA-KE----IGAD--NIVKVST-NLQDIAEEVEKIQKA  251 (365)
Q Consensus       181 ~g~~vlI~G~-g~~G~~ai~~l~~~~g~~~vi~v~~~~~~~~~~-~~----~g~~--~~~~~~~-~~~~~~~~i~~~~~~  251 (365)
                      .+.++||+|+ +++|.++++.++ ..|+ +|+.+++++++.+.+ ++    .+..  ..+..+- +..+....++++.+.
T Consensus         7 ~~k~~lVTGas~GIG~aia~~l~-~~G~-~V~~~~r~~~~~~~~~~~l~~~~~~~~~~~~~~Dv~~~~~v~~~~~~~~~~   84 (265)
T 3lf2_A            7 SEAVAVVTGGSSGIGLATVELLL-EAGA-AVAFCARDGERLRAAESALRQRFPGARLFASVCDVLDALQVRAFAEACERT   84 (265)
T ss_dssp             TTCEEEEETCSSHHHHHHHHHHH-HTTC-EEEEEESCHHHHHHHHHHHHHHSTTCCEEEEECCTTCHHHHHHHHHHHHHH
T ss_pred             CCCEEEEeCCCChHHHHHHHHHH-HCCC-EEEEEeCCHHHHHHHHHHHHHhcCCceEEEEeCCCCCHHHHHHHHHHHHHH
Confidence            4678999987 999999999555 5599 577778887765432 22    3332  2222222 223333334444332


Q ss_pred             hCCCceEEEeCCC
Q 017868          252 MGTGIDVSFDCAG  264 (365)
Q Consensus       252 ~~~~~d~vid~~g  264 (365)
                       -+++|++|.++|
T Consensus        85 -~g~id~lvnnAg   96 (265)
T 3lf2_A           85 -LGCASILVNNAG   96 (265)
T ss_dssp             -HCSCSEEEECCC
T ss_pred             -cCCCCEEEECCC
Confidence             258999999987

>2a4k_A 3-oxoacyl-[acyl carrier protein] reductase; reductase,hyperthermophIle, structural genomics, PSI, protei structure initiative; 2.30A {Thermus thermophilus} SCOP: c.2.1.2

Probab=96.17  E-value=0.037  Score=47.40  Aligned_cols=81  Identities=19%  Similarity=0.199  Sum_probs=50.8

Q ss_pred             CCCEEEEEcC-CHHHHHHHHHHHHHCCCCeEEEEeCChhHHHH-HHHcCCCE-EEeCCC-CcccHHHHHHHHHHHhCCCc
Q 017868          181 PETNVLIMGA-GPIGLVTMLGAPRAFGAPRIVIVDVDDYRLSV-AKEIGADN-IVKVST-NLQDIAEEVEKIQKAMGTGI  256 (365)
Q Consensus       181 ~g~~vlI~G~-g~~G~~ai~~l~~~~g~~~vi~v~~~~~~~~~-~~~~g~~~-~~~~~~-~~~~~~~~i~~~~~~~~~~~  256 (365)
                      .+.++||+|+ |++|.++++.++ ..|+ .|+.+++++++.+. .++++... .+..+- +.+++...+++..+. -+++
T Consensus         5 ~~k~vlITGas~gIG~aia~~l~-~~G~-~V~~~~r~~~~~~~~~~~~~~~~~~~~~D~~~~~~v~~~~~~~~~~-~g~i   81 (263)
T 2a4k_A            5 SGKTILVTGAASGIGRAALDLFA-REGA-SLVAVDREERLLAEAVAALEAEAIAVVADVSDPKAVEAVFAEALEE-FGRL   81 (263)
T ss_dssp             TTCEEEEESTTSHHHHHHHHHHH-HTTC-EEEEEESCHHHHHHHHHTCCSSEEEEECCTTSHHHHHHHHHHHHHH-HSCC
T ss_pred             CCCEEEEECCCCHHHHHHHHHHH-HCCC-EEEEEeCCHHHHHHHHHHhcCceEEEEcCCCCHHHHHHHHHHHHHH-cCCC
Confidence            4678999987 999999999555 5598 57777888776654 34454221 222222 223333334443332 2579


Q ss_pred             eEEEeCCC
Q 017868          257 DVSFDCAG  264 (365)
Q Consensus       257 d~vid~~g  264 (365)
                      |++|.++|
T Consensus        82 D~lvnnAg   89 (263)
T 2a4k_A           82 HGVAHFAG   89 (263)
T ss_dssp             CEEEEGGG
T ss_pred             cEEEECCC
Confidence            99999887

>3mti_A RRNA methylase; SAM-dependent, PSI, MCSG, structural genomics, midwest cente structural genomics, protein structure initiative; 1.95A {Streptococcus thermophilus} PDB: 3lby_A*

Probab=96.17  E-value=0.015  Score=46.80  Aligned_cols=102  Identities=15%  Similarity=0.207  Sum_probs=64.2

Q ss_pred             HhcCCCCCCEEEEEcCCHHHHHHHHHHHHHCCCCeEEEEeCChhHHHHHHH----cCCCEEEeCCCCcccHHHHHHHHHH
Q 017868          175 RRANIGPETNVLIMGAGPIGLVTMLGAPRAFGAPRIVIVDVDDYRLSVAKE----IGADNIVKVSTNLQDIAEEVEKIQK  250 (365)
Q Consensus       175 ~~~~~~~g~~vlI~G~g~~G~~ai~~l~~~~g~~~vi~v~~~~~~~~~~~~----~g~~~~~~~~~~~~~~~~~i~~~~~  250 (365)
                      ....++++++||=.|+|. |..+.. +++. +. .|++++.+++..+.+++    .+...+........++.    .   
T Consensus        16 l~~~~~~~~~vLDiGcG~-G~~~~~-la~~-~~-~v~~vD~s~~~l~~a~~~~~~~~~~~v~~~~~~~~~l~----~---   84 (185)
T 3mti_A           16 LAEVLDDESIVVDATMGN-GNDTAF-LAGL-SK-KVYAFDVQEQALGKTSQRLSDLGIENTELILDGHENLD----H---   84 (185)
T ss_dssp             HHTTCCTTCEEEESCCTT-SHHHHH-HHTT-SS-EEEEEESCHHHHHHHHHHHHHHTCCCEEEEESCGGGGG----G---
T ss_pred             HHHhCCCCCEEEEEcCCC-CHHHHH-HHHh-CC-EEEEEECCHHHHHHHHHHHHHcCCCcEEEEeCcHHHHH----h---
Confidence            345678999999988865 777777 6666 55 79999999987766543    34432221112212211    0   


Q ss_pred             HhCCCceEEEeCCCC-----------H----HHHHHHHHhcccCCEEEEEcc
Q 017868          251 AMGTGIDVSFDCAGL-----------N----KTMSTALGATCAGGKVCLVGM  287 (365)
Q Consensus       251 ~~~~~~d~vid~~g~-----------~----~~~~~~~~~l~~~G~~~~~g~  287 (365)
                      .....+|+|+-..+-           .    ..+..+.+.|+++|.++....
T Consensus        85 ~~~~~fD~v~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~LkpgG~l~i~~~  136 (185)
T 3mti_A           85 YVREPIRAAIFNLGYLPSADKSVITKPHTTLEAIEKILDRLEVGGRLAIMIY  136 (185)
T ss_dssp             TCCSCEEEEEEEEC-----------CHHHHHHHHHHHHHHEEEEEEEEEEEC
T ss_pred             hccCCcCEEEEeCCCCCCcchhcccChhhHHHHHHHHHHhcCCCcEEEEEEe
Confidence            114679999865321           1    234677889999999987643

>4dry_A 3-oxoacyl-[acyl-carrier-protein] reductase; structural genomics, PSI-biology, NEW YORK structural genomi research consortium, nysgrc; 2.50A {Sinorhizobium meliloti}

Probab=96.17  E-value=0.029  Score=48.68  Aligned_cols=82  Identities=21%  Similarity=0.225  Sum_probs=49.9

Q ss_pred             CCCEEEEEcC-CHHHHHHHHHHHHHCCCCeEEEEeCChhHHHHH-HHc----CCC-EEEeCCC-CcccHHHHHHHHHHHh
Q 017868          181 PETNVLIMGA-GPIGLVTMLGAPRAFGAPRIVIVDVDDYRLSVA-KEI----GAD-NIVKVST-NLQDIAEEVEKIQKAM  252 (365)
Q Consensus       181 ~g~~vlI~G~-g~~G~~ai~~l~~~~g~~~vi~v~~~~~~~~~~-~~~----g~~-~~~~~~~-~~~~~~~~i~~~~~~~  252 (365)
                      .|.++||+|+ +++|.++++.++ ..|+ +|+.+++++++.+.+ +++    +.. ..+..+- +.+++.+.++++.+..
T Consensus        32 ~gk~~lVTGas~GIG~aia~~la-~~G~-~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~Dv~d~~~v~~~~~~~~~~~  109 (281)
T 4dry_A           32 EGRIALVTGGGTGVGRGIAQALS-AEGY-SVVITGRRPDVLDAAAGEIGGRTGNIVRAVVCDVGDPDQVAALFAAVRAEF  109 (281)
T ss_dssp             --CEEEETTTTSHHHHHHHHHHH-HTTC-EEEEEESCHHHHHHHHHHHHHHHSSCEEEEECCTTCHHHHHHHHHHHHHHH
T ss_pred             CCCEEEEeCCCCHHHHHHHHHHH-HCCC-EEEEEECCHHHHHHHHHHHHhcCCCeEEEEEcCCCCHHHHHHHHHHHHHHc
Confidence            5788999987 999999999555 5699 577788887765432 222    211 2333322 2233444444443332


Q ss_pred             CCCceEEEeCCCC
Q 017868          253 GTGIDVSFDCAGL  265 (365)
Q Consensus       253 ~~~~d~vid~~g~  265 (365)
                       +++|++|.++|.
T Consensus       110 -g~iD~lvnnAG~  121 (281)
T 4dry_A          110 -ARLDLLVNNAGS  121 (281)
T ss_dssp             -SCCSEEEECCCC
T ss_pred             -CCCCEEEECCCC
Confidence             589999998873

>3gaf_A 7-alpha-hydroxysteroid dehydrogenase; seattle structural genomics center for infectious disease, ssgcid, oxidoreductase, structural genomics; 2.20A {Brucella melitensis}

Probab=96.17  E-value=0.03  Score=47.77  Aligned_cols=82  Identities=17%  Similarity=0.226  Sum_probs=50.8

Q ss_pred             CCCEEEEEcC-CHHHHHHHHHHHHHCCCCeEEEEeCChhHHHHH----HHcCCCE-EEeCCC-CcccHHHHHHHHHHHhC
Q 017868          181 PETNVLIMGA-GPIGLVTMLGAPRAFGAPRIVIVDVDDYRLSVA----KEIGADN-IVKVST-NLQDIAEEVEKIQKAMG  253 (365)
Q Consensus       181 ~g~~vlI~G~-g~~G~~ai~~l~~~~g~~~vi~v~~~~~~~~~~----~~~g~~~-~~~~~~-~~~~~~~~i~~~~~~~~  253 (365)
                      .+.++||+|+ +++|.++++.+++ .|+ +|+.+++++++.+.+    ++.+... .+..+- +.++....++++.+.. 
T Consensus        11 ~~k~vlVTGas~gIG~~ia~~l~~-~G~-~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~Dv~d~~~v~~~~~~~~~~~-   87 (256)
T 3gaf_A           11 NDAVAIVTGAAAGIGRAIAGTFAK-AGA-SVVVTDLKSEGAEAVAAAIRQAGGKAIGLECNVTDEQHREAVIKAALDQF-   87 (256)
T ss_dssp             TTCEEEECSCSSHHHHHHHHHHHH-HTC-EEEEEESSHHHHHHHHHHHHHTTCCEEEEECCTTCHHHHHHHHHHHHHHH-
T ss_pred             CCCEEEEECCCCHHHHHHHHHHHH-CCC-EEEEEeCCHHHHHHHHHHHHhcCCcEEEEECCCCCHHHHHHHHHHHHHHc-
Confidence            5678999987 9999999995654 499 577777877665432    3334332 222222 2233333444443332 


Q ss_pred             CCceEEEeCCCC
Q 017868          254 TGIDVSFDCAGL  265 (365)
Q Consensus       254 ~~~d~vid~~g~  265 (365)
                      +++|++|.++|.
T Consensus        88 g~id~lv~nAg~   99 (256)
T 3gaf_A           88 GKITVLVNNAGG   99 (256)
T ss_dssp             SCCCEEEECCCC
T ss_pred             CCCCEEEECCCC
Confidence            589999998873

>1yb1_A 17-beta-hydroxysteroid dehydrogenase type XI; short chain dehydrogenase, HUM structural genomics, structural genomics consortium, SGC; HET: AE2; 1.95A {Homo sapiens} SCOP: c.2.1.2

Probab=96.17  E-value=0.062  Score=46.20  Aligned_cols=81  Identities=25%  Similarity=0.337  Sum_probs=49.9

Q ss_pred             CCCEEEEEcC-CHHHHHHHHHHHHHCCCCeEEEEeCChhHHHHH----HHcCCCE-EEeCCCC-cccHHHHHHHHHHHhC
Q 017868          181 PETNVLIMGA-GPIGLVTMLGAPRAFGAPRIVIVDVDDYRLSVA----KEIGADN-IVKVSTN-LQDIAEEVEKIQKAMG  253 (365)
Q Consensus       181 ~g~~vlI~G~-g~~G~~ai~~l~~~~g~~~vi~v~~~~~~~~~~----~~~g~~~-~~~~~~~-~~~~~~~i~~~~~~~~  253 (365)
                      .+.++||+|+ |++|.+++..++ ..|+ .|+++++++++.+.+    ++.+... .+..+-. .+++...++++.+. -
T Consensus        30 ~~k~vlITGasggIG~~la~~L~-~~G~-~V~~~~r~~~~~~~~~~~l~~~~~~~~~~~~Dl~~~~~v~~~~~~~~~~-~  106 (272)
T 1yb1_A           30 TGEIVLITGAGHGIGRLTAYEFA-KLKS-KLVLWDINKHGLEETAAKCKGLGAKVHTFVVDCSNREDIYSSAKKVKAE-I  106 (272)
T ss_dssp             TTCEEEEETTTSHHHHHHHHHHH-HTTC-EEEEEESCHHHHHHHHHHHHHTTCCEEEEECCTTCHHHHHHHHHHHHHH-T
T ss_pred             CCCEEEEECCCchHHHHHHHHHH-HCCC-EEEEEEcCHHHHHHHHHHHHhcCCeEEEEEeeCCCHHHHHHHHHHHHHH-C
Confidence            4678999987 999999999554 5598 577777877655432    2334322 2222222 22333334333332 3


Q ss_pred             CCceEEEeCCC
Q 017868          254 TGIDVSFDCAG  264 (365)
Q Consensus       254 ~~~d~vid~~g  264 (365)
                      +++|++|.++|
T Consensus       107 g~iD~li~~Ag  117 (272)
T 1yb1_A          107 GDVSILVNNAG  117 (272)
T ss_dssp             CCCSEEEECCC
T ss_pred             CCCcEEEECCC
Confidence            57999999887

>2ag5_A DHRS6, dehydrogenase/reductase (SDR family) member 6; protein-CO-factor complex, structural genomics, structural G consortium, SGC, oxidoreductase; HET: NAD; 1.84A {Homo sapiens} SCOP: c.2.1.2

Probab=96.16  E-value=0.021  Score=48.42  Aligned_cols=78  Identities=17%  Similarity=0.315  Sum_probs=48.4

Q ss_pred             CCCEEEEEcC-CHHHHHHHHHHHHHCCCCeEEEEeCChhHHHHHHHcCCCEEEeCCCCcccHHHHHHHHHHHhCCCceEE
Q 017868          181 PETNVLIMGA-GPIGLVTMLGAPRAFGAPRIVIVDVDDYRLSVAKEIGADNIVKVSTNLQDIAEEVEKIQKAMGTGIDVS  259 (365)
Q Consensus       181 ~g~~vlI~G~-g~~G~~ai~~l~~~~g~~~vi~v~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~i~~~~~~~~~~~d~v  259 (365)
                      .+.++||+|+ |++|.++++.++ ..|+ .|+.+++++++.+.+.++.-...+..+-.+.   +.+++..+. -+++|++
T Consensus         5 ~~k~vlVTGas~gIG~~ia~~l~-~~G~-~V~~~~r~~~~~~~~~~~~~~~~~~~D~~~~---~~~~~~~~~-~~~id~l   78 (246)
T 2ag5_A            5 DGKVIILTAAAQGIGQAAALAFA-REGA-KVIATDINESKLQELEKYPGIQTRVLDVTKK---KQIDQFANE-VERLDVL   78 (246)
T ss_dssp             TTCEEEESSTTSHHHHHHHHHHH-HTTC-EEEEEESCHHHHGGGGGSTTEEEEECCTTCH---HHHHHHHHH-CSCCSEE
T ss_pred             CCCEEEEeCCCcHHHHHHHHHHH-HCCC-EEEEEECCHHHHHHHHhccCceEEEeeCCCH---HHHHHHHHH-hCCCCEE
Confidence            4678999987 999999999554 5598 6777788877654333332112222222222   223333322 3579999


Q ss_pred             EeCCC
Q 017868          260 FDCAG  264 (365)
Q Consensus       260 id~~g  264 (365)
                      |.++|
T Consensus        79 v~~Ag   83 (246)
T 2ag5_A           79 FNVAG   83 (246)
T ss_dssp             EECCC
T ss_pred             EECCc
Confidence            99887

>3svt_A Short-chain type dehydrogenase/reductase; ssgcid, seattle structural genomics center for infectious DI oxidoreductase; 2.00A {Mycobacterium ulcerans}

Probab=96.16  E-value=0.03  Score=48.48  Aligned_cols=82  Identities=23%  Similarity=0.321  Sum_probs=50.4

Q ss_pred             CCCEEEEEcC-CHHHHHHHHHHHHHCCCCeEEEEeCChhHHHH-H---HHcCCC--E--EEeCCC-CcccHHHHHHHHHH
Q 017868          181 PETNVLIMGA-GPIGLVTMLGAPRAFGAPRIVIVDVDDYRLSV-A---KEIGAD--N--IVKVST-NLQDIAEEVEKIQK  250 (365)
Q Consensus       181 ~g~~vlI~G~-g~~G~~ai~~l~~~~g~~~vi~v~~~~~~~~~-~---~~~g~~--~--~~~~~~-~~~~~~~~i~~~~~  250 (365)
                      .+.++||+|+ +++|.++++.++ ..|+ +|+.+++++++.+. +   ++.+..  .  .+..+- +.++..+.+++..+
T Consensus        10 ~~k~vlVTGas~gIG~aia~~l~-~~G~-~V~~~~r~~~~~~~~~~~l~~~~~~~~~~~~~~~Dv~~~~~v~~~~~~~~~   87 (281)
T 3svt_A           10 QDRTYLVTGGGSGIGKGVAAGLV-AAGA-SVMIVGRNPDKLAGAVQELEALGANGGAIRYEPTDITNEDETARAVDAVTA   87 (281)
T ss_dssp             TTCEEEEETTTSHHHHHHHHHHH-HTTC-EEEEEESCHHHHHHHHHHHHTTCCSSCEEEEEECCTTSHHHHHHHHHHHHH
T ss_pred             CCCEEEEeCCCcHHHHHHHHHHH-HCCC-EEEEEeCCHHHHHHHHHHHHHhCCCCceEEEEeCCCCCHHHHHHHHHHHHH
Confidence            4689999987 999999999555 5599 57777888766442 2   333321  2  222222 22333334444433


Q ss_pred             HhCCCceEEEeCCCC
Q 017868          251 AMGTGIDVSFDCAGL  265 (365)
Q Consensus       251 ~~~~~~d~vid~~g~  265 (365)
                      .. +++|++|.++|.
T Consensus        88 ~~-g~id~lv~nAg~  101 (281)
T 3svt_A           88 WH-GRLHGVVHCAGG  101 (281)
T ss_dssp             HH-SCCCEEEECCCC
T ss_pred             Hc-CCCCEEEECCCc
Confidence            22 579999998884

>4had_A Probable oxidoreductase protein; structural genomics, protein structure initiative, nysgrc, PSI-biology; 2.00A {Rhizobium etli}

Probab=96.16  E-value=0.063  Score=48.06  Aligned_cols=130  Identities=17%  Similarity=0.176  Sum_probs=82.7

Q ss_pred             CEEEEEcCCHHHHH-HHHHHHHHCCCCeEEEEeCChhHH-HHHHHcCCCEEEeCCCCcccHHHHHHHHHHHhCCCceEEE
Q 017868          183 TNVLIMGAGPIGLV-TMLGAPRAFGAPRIVIVDVDDYRL-SVAKEIGADNIVKVSTNLQDIAEEVEKIQKAMGTGIDVSF  260 (365)
Q Consensus       183 ~~vlI~G~g~~G~~-ai~~l~~~~g~~~vi~v~~~~~~~-~~~~~~g~~~~~~~~~~~~~~~~~i~~~~~~~~~~~d~vi  260 (365)
                      =++.|+|+|.+|.. .+..+.+.-+++.+.++++++++. ++++++|...++      .++.+.+.      ...+|+|+
T Consensus        24 irigiIG~G~ig~~~~~~~~~~~~~~~lvav~d~~~~~a~~~a~~~g~~~~y------~d~~ell~------~~~iDaV~   91 (350)
T 4had_A           24 LRFGIISTAKIGRDNVVPAIQDAENCVVTAIASRDLTRAREMADRFSVPHAF------GSYEEMLA------SDVIDAVY   91 (350)
T ss_dssp             EEEEEESCCHHHHHTHHHHHHHCSSEEEEEEECSSHHHHHHHHHHHTCSEEE------SSHHHHHH------CSSCSEEE
T ss_pred             cEEEEEcChHHHHHHHHHHHHhCCCeEEEEEECCCHHHHHHHHHHcCCCeee------CCHHHHhc------CCCCCEEE
Confidence            37889999999974 455244455776555667777765 467889987654      24444332      46899999


Q ss_pred             eCCCCHHHHHHHHHhcccCCEEEEEccCCCCccccch---H----hhhcCcEEE-ee-cccCCcHHHHHHHHHcCCC
Q 017868          261 DCAGLNKTMSTALGATCAGGKVCLVGMGHHEMTVPLT---P----AAVREVDVV-GV-FRYKNTWPLCLELLRSGKI  328 (365)
Q Consensus       261 d~~g~~~~~~~~~~~l~~~G~~~~~g~~~~~~~~~~~---~----~~~~~~~i~-~~-~~~~~~~~~~~~~l~~g~~  328 (365)
                      -|+....+.+.+..+|.. |+-+++.   .+......   .    .-.+++.+. +. ..+...++.+.+++++|.+
T Consensus        92 I~tP~~~H~~~~~~al~a-GkhVl~E---KPla~~~~ea~~l~~~a~~~~~~l~v~~~~R~~p~~~~~k~~i~~G~i  164 (350)
T 4had_A           92 IPLPTSQHIEWSIKAADA-GKHVVCE---KPLALKAGDIDAVIAARDRNKVVVTEAYMITYSPVWQKVRSLIDEGAI  164 (350)
T ss_dssp             ECSCGGGHHHHHHHHHHT-TCEEEEC---SCCCSSGGGGHHHHHHHHHHTCCEEECCGGGGSHHHHHHHHHHHTTTT
T ss_pred             EeCCCchhHHHHHHHHhc-CCEEEEe---CCcccchhhHHHHHHHHHHcCCceeEeeeeecCHHHHHhhHhhhcCCC
Confidence            999888788888888875 5556663   22211111   1    112233222 22 2336678888999999887

>4g81_D Putative hexonate dehydrogenase; enzyme function initiative, EFI, structural genomics, dehydr oxidoreductase; 1.90A {Salmonella enterica subsp}

Probab=96.15  E-value=0.03  Score=47.78  Aligned_cols=81  Identities=22%  Similarity=0.351  Sum_probs=52.3

Q ss_pred             CCCEEEEEcC-CHHHHHHHHHHHHHCCCCeEEEEeCChhHHH----HHHHcCCCEEE-eCCC-CcccHHHHHHHHHHHhC
Q 017868          181 PETNVLIMGA-GPIGLVTMLGAPRAFGAPRIVIVDVDDYRLS----VAKEIGADNIV-KVST-NLQDIAEEVEKIQKAMG  253 (365)
Q Consensus       181 ~g~~vlI~G~-g~~G~~ai~~l~~~~g~~~vi~v~~~~~~~~----~~~~~g~~~~~-~~~~-~~~~~~~~i~~~~~~~~  253 (365)
                      +|+++||+|+ +++|.+.++.++ ..|+ +|+.+++++++.+    .+++.|..... ..+- +.++..+.+++..+. -
T Consensus         8 ~gKvalVTGas~GIG~aia~~la-~~Ga-~Vvi~~~~~~~~~~~~~~l~~~g~~~~~~~~Dv~~~~~v~~~~~~~~~~-~   84 (255)
T 4g81_D            8 TGKTALVTGSARGLGFAYAEGLA-AAGA-RVILNDIRATLLAESVDTLTRKGYDAHGVAFDVTDELAIEAAFSKLDAE-G   84 (255)
T ss_dssp             TTCEEEETTCSSHHHHHHHHHHH-HTTC-EEEECCSCHHHHHHHHHHHHHTTCCEEECCCCTTCHHHHHHHHHHHHHT-T
T ss_pred             CCCEEEEeCCCcHHHHHHHHHHH-HCCC-EEEEEECCHHHHHHHHHHHHhcCCcEEEEEeeCCCHHHHHHHHHHHHHH-C
Confidence            5789999987 999999999554 5699 6788888876643    23444543321 1121 223444444444432 4


Q ss_pred             CCceEEEeCCC
Q 017868          254 TGIDVSFDCAG  264 (365)
Q Consensus       254 ~~~d~vid~~g  264 (365)
                      +++|++++++|
T Consensus        85 G~iDiLVNNAG   95 (255)
T 4g81_D           85 IHVDILINNAG   95 (255)
T ss_dssp             CCCCEEEECCC
T ss_pred             CCCcEEEECCC
Confidence            68999999988

>2nxc_A L11 mtase, ribosomal protein L11 methyltransferase; transferase S-adenosly-L-methionine dependent methyltransfer posttranslational modification; 1.59A {Thermus thermophilus} SCOP: c.66.1.39 PDB: 1ufk_A 2nxe_A* 2nxj_A 2nxn_A 2zbp_A* 2zbq_A* 2zbr_A* 3cjq_A* 3cjr_A* 3cju_A* 3egv_A* 3cjt_A*

Probab=96.15  E-value=0.093  Score=44.64  Aligned_cols=124  Identities=20%  Similarity=0.326  Sum_probs=72.5

Q ss_pred             CceEECCCCCCcchhccchhhHHHHHHHHhcCCCCCCEEEEEcCCHHHHHHHHHHHHHCCCCeEEEEeCChhHHHHHHH-
Q 017868          147 DLCFKLPDNVSLEEGAMCEPLSVGLHACRRANIGPETNVLIMGAGPIGLVTMLGAPRAFGAPRIVIVDVDDYRLSVAKE-  225 (365)
Q Consensus       147 ~~~~~iP~~~~~~~a~~~~~~~~a~~~~~~~~~~~g~~vlI~G~g~~G~~ai~~l~~~~g~~~vi~v~~~~~~~~~~~~-  225 (365)
                      ...+.++++..+..... +........+... ++++++||-.|+|. |..++. +++ .|. .+++++.++...+.+++ 
T Consensus        88 ~~~~~l~p~~~fgtg~~-~tt~~~~~~l~~~-~~~~~~VLDiGcG~-G~l~~~-la~-~g~-~v~gvDi~~~~v~~a~~n  161 (254)
T 2nxc_A           88 EIPLVIEPGMAFGTGHH-ETTRLALKALARH-LRPGDKVLDLGTGS-GVLAIA-AEK-LGG-KALGVDIDPMVLPQAEAN  161 (254)
T ss_dssp             SEEEECCCC-----CCS-HHHHHHHHHHHHH-CCTTCEEEEETCTT-SHHHHH-HHH-TTC-EEEEEESCGGGHHHHHHH
T ss_pred             ceEEEECCCccccCCCC-HHHHHHHHHHHHh-cCCCCEEEEecCCC-cHHHHH-HHH-hCC-eEEEEECCHHHHHHHHHH
Confidence            44566666655443221 1111122333333 67889999999865 766666 655 477 89999999887766544 


Q ss_pred             ---cCCC-EEEeCCCCcccHHHHHHHHHHHhCCCceEEEeCCCC---HHHHHHHHHhcccCCEEEEEcc
Q 017868          226 ---IGAD-NIVKVSTNLQDIAEEVEKIQKAMGTGIDVSFDCAGL---NKTMSTALGATCAGGKVCLVGM  287 (365)
Q Consensus       226 ---~g~~-~~~~~~~~~~~~~~~i~~~~~~~~~~~d~vid~~g~---~~~~~~~~~~l~~~G~~~~~g~  287 (365)
                         .+.. .++.     .++.+.+      ....+|+|+...-.   ...+..+.+.|+++|.+++.+.
T Consensus       162 ~~~~~~~v~~~~-----~d~~~~~------~~~~fD~Vv~n~~~~~~~~~l~~~~~~LkpgG~lils~~  219 (254)
T 2nxc_A          162 AKRNGVRPRFLE-----GSLEAAL------PFGPFDLLVANLYAELHAALAPRYREALVPGGRALLTGI  219 (254)
T ss_dssp             HHHTTCCCEEEE-----SCHHHHG------GGCCEEEEEEECCHHHHHHHHHHHHHHEEEEEEEEEEEE
T ss_pred             HHHcCCcEEEEE-----CChhhcC------cCCCCCEEEECCcHHHHHHHHHHHHHHcCCCCEEEEEee
Confidence               3443 1111     2332211      14689999975431   2355677889999999988654

>3r6d_A NAD-dependent epimerase/dehydratase; structural genomics, PSI-biology, midwest center for structu genomics, MCSG, veillo parvula; HET: MLZ; 1.25A {Veillonella parvula dsm 2008} PDB: 4hng_A 4hnh_A* 3r14_A*

Probab=96.15  E-value=0.073  Score=44.03  Aligned_cols=97  Identities=20%  Similarity=0.127  Sum_probs=58.4

Q ss_pred             CEEEEEcC-CHHHHHHHHHHHHHCCCCeEEEEeCChh-HHHHHHHcCCC-EEEeCCCCcccHHHHHHHHHHHhCCCceEE
Q 017868          183 TNVLIMGA-GPIGLVTMLGAPRAFGAPRIVIVDVDDY-RLSVAKEIGAD-NIVKVSTNLQDIAEEVEKIQKAMGTGIDVS  259 (365)
Q Consensus       183 ~~vlI~G~-g~~G~~ai~~l~~~~g~~~vi~v~~~~~-~~~~~~~~g~~-~~~~~~~~~~~~~~~i~~~~~~~~~~~d~v  259 (365)
                      .+|||+|+ |.+|.++++.+++..|+ .|++++++++ +.+.+...+.. ..+..+-  .+. +.+++..    .++|++
T Consensus         6 k~vlVtGasg~iG~~~~~~l~~~~g~-~V~~~~r~~~~~~~~~~~~~~~~~~~~~D~--~d~-~~~~~~~----~~~d~v   77 (221)
T 3r6d_A            6 XYITILGAAGQIAQXLTATLLTYTDM-HITLYGRQLKTRIPPEIIDHERVTVIEGSF--QNP-GXLEQAV----TNAEVV   77 (221)
T ss_dssp             SEEEEESTTSHHHHHHHHHHHHHCCC-EEEEEESSHHHHSCHHHHTSTTEEEEECCT--TCH-HHHHHHH----TTCSEE
T ss_pred             EEEEEEeCCcHHHHHHHHHHHhcCCc-eEEEEecCccccchhhccCCCceEEEECCC--CCH-HHHHHHH----cCCCEE
Confidence            46999997 99999999956546799 6777778877 65444222222 2222222  222 2344332    478999


Q ss_pred             EeCCCCHHH-HHHHHHhcccC--CEEEEEcc
Q 017868          260 FDCAGLNKT-MSTALGATCAG--GKVCLVGM  287 (365)
Q Consensus       260 id~~g~~~~-~~~~~~~l~~~--G~~~~~g~  287 (365)
                      |.++|.... ....+..+...  ++++.++.
T Consensus        78 v~~ag~~n~~~~~~~~~~~~~~~~~iv~iSs  108 (221)
T 3r6d_A           78 FVGAMESGSDMASIVKALSRXNIRRVIGVSM  108 (221)
T ss_dssp             EESCCCCHHHHHHHHHHHHHTTCCEEEEEEE
T ss_pred             EEcCCCCChhHHHHHHHHHhcCCCeEEEEee
Confidence            999986211 33444444433  57887764

>3grp_A 3-oxoacyl-(acyl carrierprotein) reductase; structural genomics, oxidoreductase, S structural genomics center for infectious disease, ssgcid; 2.09A {Bartonella henselae} PDB: 3enn_A 3emk_A

Probab=96.14  E-value=0.034  Score=47.79  Aligned_cols=82  Identities=24%  Similarity=0.360  Sum_probs=52.3

Q ss_pred             CCCEEEEEcC-CHHHHHHHHHHHHHCCCCeEEEEeCChhHHH-HHHHcCCCEE-EeCCC-CcccHHHHHHHHHHHhCCCc
Q 017868          181 PETNVLIMGA-GPIGLVTMLGAPRAFGAPRIVIVDVDDYRLS-VAKEIGADNI-VKVST-NLQDIAEEVEKIQKAMGTGI  256 (365)
Q Consensus       181 ~g~~vlI~G~-g~~G~~ai~~l~~~~g~~~vi~v~~~~~~~~-~~~~~g~~~~-~~~~~-~~~~~~~~i~~~~~~~~~~~  256 (365)
                      .+.++||+|+ +++|.++++.++ ..|+ .|+.+++++++.+ ..++++.... +..+- +.++..+.++++.+. .+++
T Consensus        26 ~gk~vlVTGas~gIG~aia~~la-~~G~-~V~~~~r~~~~~~~~~~~~~~~~~~~~~Dv~d~~~v~~~~~~~~~~-~g~i  102 (266)
T 3grp_A           26 TGRKALVTGATGGIGEAIARCFH-AQGA-IVGLHGTREDKLKEIAADLGKDVFVFSANLSDRKSIKQLAEVAERE-MEGI  102 (266)
T ss_dssp             TTCEEEESSTTSHHHHHHHHHHH-HTTC-EEEEEESCHHHHHHHHHHHCSSEEEEECCTTSHHHHHHHHHHHHHH-HTSC
T ss_pred             CCCEEEEeCCCcHHHHHHHHHHH-HCCC-EEEEEeCCHHHHHHHHHHhCCceEEEEeecCCHHHHHHHHHHHHHH-cCCC
Confidence            5789999987 999999999554 5699 5777778777655 4456665432 22222 222333333333332 2589


Q ss_pred             eEEEeCCCC
Q 017868          257 DVSFDCAGL  265 (365)
Q Consensus       257 d~vid~~g~  265 (365)
                      |++|.++|.
T Consensus       103 D~lvnnAg~  111 (266)
T 3grp_A          103 DILVNNAGI  111 (266)
T ss_dssp             CEEEECCCC
T ss_pred             CEEEECCCC
Confidence            999999884

>3gvc_A Oxidoreductase, probable short-chain type dehydrogenase/reductase; ssgcid, decode, niaid, UWPPG, SBRI, structural genomics; 2.45A {Mycobacterium tuberculosis}

Probab=96.14  E-value=0.031  Score=48.33  Aligned_cols=82  Identities=24%  Similarity=0.352  Sum_probs=52.2

Q ss_pred             CCCEEEEEcC-CHHHHHHHHHHHHHCCCCeEEEEeCChhHHH-HHHHcCCC-EEEeCCC-CcccHHHHHHHHHHHhCCCc
Q 017868          181 PETNVLIMGA-GPIGLVTMLGAPRAFGAPRIVIVDVDDYRLS-VAKEIGAD-NIVKVST-NLQDIAEEVEKIQKAMGTGI  256 (365)
Q Consensus       181 ~g~~vlI~G~-g~~G~~ai~~l~~~~g~~~vi~v~~~~~~~~-~~~~~g~~-~~~~~~~-~~~~~~~~i~~~~~~~~~~~  256 (365)
                      .|.++||+|+ +++|.++++.++ ..|+ +|+.+++++++.+ ..++++.. ..+..+- +.++..+.++++.+.. +++
T Consensus        28 ~gk~vlVTGas~gIG~aia~~la-~~G~-~V~~~~r~~~~~~~~~~~~~~~~~~~~~Dv~d~~~v~~~~~~~~~~~-g~i  104 (277)
T 3gvc_A           28 AGKVAIVTGAGAGIGLAVARRLA-DEGC-HVLCADIDGDAADAAATKIGCGAAACRVDVSDEQQIIAMVDACVAAF-GGV  104 (277)
T ss_dssp             TTCEEEETTTTSTHHHHHHHHHH-HTTC-EEEEEESSHHHHHHHHHHHCSSCEEEECCTTCHHHHHHHHHHHHHHH-SSC
T ss_pred             CCCEEEEECCCcHHHHHHHHHHH-HCCC-EEEEEeCCHHHHHHHHHHcCCcceEEEecCCCHHHHHHHHHHHHHHc-CCC
Confidence            5678999987 999999999555 5599 6777888877655 34555532 2222222 2233333344443332 589


Q ss_pred             eEEEeCCCC
Q 017868          257 DVSFDCAGL  265 (365)
Q Consensus       257 d~vid~~g~  265 (365)
                      |++|.++|.
T Consensus       105 D~lvnnAg~  113 (277)
T 3gvc_A          105 DKLVANAGV  113 (277)
T ss_dssp             CEEEECCCC
T ss_pred             CEEEECCCC
Confidence            999998883

>1yo6_A Putative carbonyl reductase sniffer; tyrosine-dependent oxidoreductase (SDR family), structural genomics, PSI; 2.60A {Caenorhabditis elegans} SCOP: c.2.1.2

Probab=96.13  E-value=0.016  Score=48.93  Aligned_cols=81  Identities=20%  Similarity=0.292  Sum_probs=50.2

Q ss_pred             CCEEEEEcC-CHHHHHHHHHHHHHCC--CCeEEEEeCChhHHHHHHHc-CCC-EEEeCCCCc-ccHHHHHHHHHHHhC-C
Q 017868          182 ETNVLIMGA-GPIGLVTMLGAPRAFG--APRIVIVDVDDYRLSVAKEI-GAD-NIVKVSTNL-QDIAEEVEKIQKAMG-T  254 (365)
Q Consensus       182 g~~vlI~G~-g~~G~~ai~~l~~~~g--~~~vi~v~~~~~~~~~~~~~-g~~-~~~~~~~~~-~~~~~~i~~~~~~~~-~  254 (365)
                      +.++||+|+ |++|.++++.++ ..|  + .|++++++.++.+.++++ +.. ..+..+-.+ +++.+.++++.+..+ .
T Consensus         3 ~k~vlItGasggiG~~la~~l~-~~g~~~-~V~~~~r~~~~~~~l~~~~~~~~~~~~~D~~~~~~~~~~~~~~~~~~g~~   80 (250)
T 1yo6_A            3 PGSVVVTGANRGIGLGLVQQLV-KDKNIR-HIIATARDVEKATELKSIKDSRVHVLPLTVTCDKSLDTFVSKVGEIVGSD   80 (250)
T ss_dssp             CSEEEESSCSSHHHHHHHHHHH-TCTTCC-EEEEEESSGGGCHHHHTCCCTTEEEEECCTTCHHHHHHHHHHHHHHHGGG
T ss_pred             CCEEEEecCCchHHHHHHHHHH-hcCCCc-EEEEEecCHHHHHHHHhccCCceEEEEeecCCHHHHHHHHHHHHHhcCCC
Confidence            568999987 999999999454 568  6 688888887776655555 222 222222222 233333443333222 2


Q ss_pred             CceEEEeCCC
Q 017868          255 GIDVSFDCAG  264 (365)
Q Consensus       255 ~~d~vid~~g  264 (365)
                      ++|++|.++|
T Consensus        81 ~id~li~~Ag   90 (250)
T 1yo6_A           81 GLSLLINNAG   90 (250)
T ss_dssp             CCCEEEECCC
T ss_pred             CCcEEEECCc
Confidence            7999999886

>3r3s_A Oxidoreductase; structural genomics, csgid, center for structural genomics O infectious diseases, 3-layer(ABA) sandwich, rossmann fold; HET: NAD; 1.25A {Salmonella enterica subsp}

Probab=96.13  E-value=0.073  Score=46.38  Aligned_cols=81  Identities=20%  Similarity=0.228  Sum_probs=47.3

Q ss_pred             CCCEEEEEcC-CHHHHHHHHHHHHHCCCCeEEEEeCCh--hHH----HHHHHcCCCEEE-eCCC-CcccHHHHHHHHHHH
Q 017868          181 PETNVLIMGA-GPIGLVTMLGAPRAFGAPRIVIVDVDD--YRL----SVAKEIGADNIV-KVST-NLQDIAEEVEKIQKA  251 (365)
Q Consensus       181 ~g~~vlI~G~-g~~G~~ai~~l~~~~g~~~vi~v~~~~--~~~----~~~~~~g~~~~~-~~~~-~~~~~~~~i~~~~~~  251 (365)
                      .++++||+|+ +++|.+++..++ ..|+ .|+.++++.  ++.    +.+++.+..... ..+- +.++....++++.+.
T Consensus        48 ~~k~vlVTGas~GIG~aia~~la-~~G~-~V~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~Dv~d~~~v~~~~~~~~~~  125 (294)
T 3r3s_A           48 KDRKALVTGGDSGIGRAAAIAYA-REGA-DVAINYLPAEEEDAQQVKALIEECGRKAVLLPGDLSDESFARSLVHKAREA  125 (294)
T ss_dssp             TTCEEEEETTTSHHHHHHHHHHH-HTTC-EEEEECCGGGHHHHHHHHHHHHHTTCCEEECCCCTTSHHHHHHHHHHHHHH
T ss_pred             CCCEEEEeCCCcHHHHHHHHHHH-HCCC-EEEEEeCCcchhHHHHHHHHHHHcCCcEEEEEecCCCHHHHHHHHHHHHHH
Confidence            5789999987 999999999555 5699 466665542  222    233445543322 1121 122333333333332


Q ss_pred             hCCCceEEEeCCC
Q 017868          252 MGTGIDVSFDCAG  264 (365)
Q Consensus       252 ~~~~~d~vid~~g  264 (365)
                       -+++|++|.+.|
T Consensus       126 -~g~iD~lv~nAg  137 (294)
T 3r3s_A          126 -LGGLDILALVAG  137 (294)
T ss_dssp             -HTCCCEEEECCC
T ss_pred             -cCCCCEEEECCC
Confidence             258999999887

>2ph5_A Homospermidine synthase; alpha-beta protein, structural genomics, PSI-2, protein STRU initiative; HET: NAD; 2.50A {Legionella pneumophila subsp}

Probab=96.13  E-value=0.015  Score=53.83  Aligned_cols=105  Identities=15%  Similarity=0.145  Sum_probs=71.5

Q ss_pred             CCCCCCEEEEEcCCHHHHHHHHHHHHHCCCC--eEEEEeCChhHHHHHHHcCCCEEEeCCCCcccHHHHHHHHHHHhCCC
Q 017868          178 NIGPETNVLIMGAGPIGLVTMLGAPRAFGAP--RIVIVDVDDYRLSVAKEIGADNIVKVSTNLQDIAEEVEKIQKAMGTG  255 (365)
Q Consensus       178 ~~~~g~~vlI~G~g~~G~~ai~~l~~~~g~~--~vi~v~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~i~~~~~~~~~~  255 (365)
                      ++....+|||+|+|++|+.++.++++..+..  .++.++..+.+.++.+.+|... ....-+..++.+.+..+.   .++
T Consensus         9 ~~~~~~rVlIIGaGgVG~~va~lla~~~dv~~~~I~vaD~~~~~~~~~~~~g~~~-~~~~Vdadnv~~~l~aLl---~~~   84 (480)
T 2ph5_A            9 KILFKNRFVILGFGCVGQALMPLIFEKFDIKPSQVTIIAAEGTKVDVAQQYGVSF-KLQQITPQNYLEVIGSTL---EEN   84 (480)
T ss_dssp             CBCCCSCEEEECCSHHHHHHHHHHHHHBCCCGGGEEEEESSCCSCCHHHHHTCEE-EECCCCTTTHHHHTGGGC---CTT
T ss_pred             eecCCCCEEEECcCHHHHHHHHHHHhCCCCceeEEEEeccchhhhhHHhhcCCce-eEEeccchhHHHHHHHHh---cCC
Confidence            3556678999999999999999788887663  5777777766666667777533 322223344444444332   234


Q ss_pred             ceEEEeCCCCHHHHHHHHHhcccCCEEEEEcc
Q 017868          256 IDVSFDCAGLNKTMSTALGATCAGGKVCLVGM  287 (365)
Q Consensus       256 ~d~vid~~g~~~~~~~~~~~l~~~G~~~~~g~  287 (365)
                       |+||+++-....+..+-.|+..+-.++....
T Consensus        85 -DvVIN~s~~~~~l~Im~acleaGv~YlDTa~  115 (480)
T 2ph5_A           85 -DFLIDVSIGISSLALIILCNQKGALYINAAT  115 (480)
T ss_dssp             -CEEEECCSSSCHHHHHHHHHHHTCEEEESSC
T ss_pred             -CEEEECCccccCHHHHHHHHHcCCCEEECCC
Confidence             9999977555566677778888888887753

>1xkq_A Short-chain reductase family member (5D234); parrallel beta-sheet of seven strands in the order 3214567; HET: NDP; 2.10A {Caenorhabditis elegans} SCOP: c.2.1.2

Probab=96.13  E-value=0.024  Score=49.06  Aligned_cols=81  Identities=26%  Similarity=0.310  Sum_probs=49.4

Q ss_pred             CCCEEEEEcC-CHHHHHHHHHHHHHCCCCeEEEEeCChhHHHHH-HHc---CC---C-EEEeCCC-CcccHHHHHHHHHH
Q 017868          181 PETNVLIMGA-GPIGLVTMLGAPRAFGAPRIVIVDVDDYRLSVA-KEI---GA---D-NIVKVST-NLQDIAEEVEKIQK  250 (365)
Q Consensus       181 ~g~~vlI~G~-g~~G~~ai~~l~~~~g~~~vi~v~~~~~~~~~~-~~~---g~---~-~~~~~~~-~~~~~~~~i~~~~~  250 (365)
                      .+.++||+|+ +++|.++++.++ ..|+ .|+.+++++++.+.+ +++   +.   . ..+..+- +.+++...++++.+
T Consensus         5 ~~k~vlVTGas~gIG~~ia~~l~-~~G~-~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~~~Dv~~~~~v~~~~~~~~~   82 (280)
T 1xkq_A            5 SNKTVIITGSSNGIGRTTAILFA-QEGA-NVTITGRSSERLEETRQIILKSGVSEKQVNSVVADVTTEDGQDQIINSTLK   82 (280)
T ss_dssp             TTCEEEETTCSSHHHHHHHHHHH-HTTC-EEEEEESCHHHHHHHHHHHHTTTCCGGGEEEEECCTTSHHHHHHHHHHHHH
T ss_pred             CCCEEEEECCCChHHHHHHHHHH-HCCC-EEEEEeCCHHHHHHHHHHHHHcCCCCcceEEEEecCCCHHHHHHHHHHHHH
Confidence            4678999987 999999999555 5599 577778887665432 322   32   1 2222222 22333333444333


Q ss_pred             HhCCCceEEEeCCC
Q 017868          251 AMGTGIDVSFDCAG  264 (365)
Q Consensus       251 ~~~~~~d~vid~~g  264 (365)
                      .. +++|++|.++|
T Consensus        83 ~~-g~iD~lv~nAg   95 (280)
T 1xkq_A           83 QF-GKIDVLVNNAG   95 (280)
T ss_dssp             HH-SCCCEEEECCC
T ss_pred             hc-CCCCEEEECCC
Confidence            22 47999999887

>2ew8_A (S)-1-phenylethanol dehydrogenase; transferase; 2.10A {Azoarcus SP} SCOP: c.2.1.2 PDB: 2ewm_A*

Probab=96.11  E-value=0.049  Score=46.16  Aligned_cols=81  Identities=20%  Similarity=0.233  Sum_probs=49.8

Q ss_pred             CCCEEEEEcC-CHHHHHHHHHHHHHCCCCeEEEEeCCh-hHHH-HHHHcCCCE-EEeCCCC-cccHHHHHHHHHHHhCCC
Q 017868          181 PETNVLIMGA-GPIGLVTMLGAPRAFGAPRIVIVDVDD-YRLS-VAKEIGADN-IVKVSTN-LQDIAEEVEKIQKAMGTG  255 (365)
Q Consensus       181 ~g~~vlI~G~-g~~G~~ai~~l~~~~g~~~vi~v~~~~-~~~~-~~~~~g~~~-~~~~~~~-~~~~~~~i~~~~~~~~~~  255 (365)
                      .+.++||+|+ +++|.++++.++ ..|+ .|+.+++++ ++.+ .+++.+... .+..+-. .+++...++++.+.. ++
T Consensus         6 ~~k~vlVTGas~gIG~~ia~~l~-~~G~-~V~~~~r~~~~~~~~~~~~~~~~~~~~~~Dv~~~~~v~~~~~~~~~~~-g~   82 (249)
T 2ew8_A            6 KDKLAVITGGANGIGRAIAERFA-VEGA-DIAIADLVPAPEAEAAIRNLGRRVLTVKCDVSQPGDVEAFGKQVISTF-GR   82 (249)
T ss_dssp             TTCEEEEETTTSHHHHHHHHHHH-HTTC-EEEEEESSCCHHHHHHHHHTTCCEEEEECCTTCHHHHHHHHHHHHHHH-SC
T ss_pred             CCCEEEEeCCCcHHHHHHHHHHH-HCCC-EEEEEcCCchhHHHHHHHhcCCcEEEEEeecCCHHHHHHHHHHHHHHc-CC
Confidence            4678999987 999999999554 5698 567777765 5443 345555432 2222222 223333334333322 57


Q ss_pred             ceEEEeCCC
Q 017868          256 IDVSFDCAG  264 (365)
Q Consensus       256 ~d~vid~~g  264 (365)
                      +|++|.++|
T Consensus        83 id~lv~nAg   91 (249)
T 2ew8_A           83 CDILVNNAG   91 (249)
T ss_dssp             CCEEEECCC
T ss_pred             CCEEEECCC
Confidence            999999887

>2pd6_A Estradiol 17-beta-dehydrogenase 8; short-chain dehydrogenase/reductase, steroid metabolism, LIP metabolism, structural genomics; HET: NAD; 2.00A {Homo sapiens}

Probab=96.11  E-value=0.053  Score=46.23  Aligned_cols=81  Identities=20%  Similarity=0.300  Sum_probs=48.8

Q ss_pred             CCCEEEEEcC-CHHHHHHHHHHHHHCCCCeEEEEeCChhHHHHH-HHcC-----------CCEEEeCCC-CcccHHHHHH
Q 017868          181 PETNVLIMGA-GPIGLVTMLGAPRAFGAPRIVIVDVDDYRLSVA-KEIG-----------ADNIVKVST-NLQDIAEEVE  246 (365)
Q Consensus       181 ~g~~vlI~G~-g~~G~~ai~~l~~~~g~~~vi~v~~~~~~~~~~-~~~g-----------~~~~~~~~~-~~~~~~~~i~  246 (365)
                      .+.++||+|+ |++|.+++..++ ..|+ .|+.+++++++.+.+ +++.           -...+..+- +.+++.+.++
T Consensus         6 ~~k~vlITGasggiG~~la~~l~-~~G~-~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~D~~~~~~~~~~~~   83 (264)
T 2pd6_A            6 RSALALVTGAGSGIGRAVSVRLA-GEGA-TVAACDLDRAAAQETVRLLGGPGSKEGPPRGNHAAFQADVSEARAARCLLE   83 (264)
T ss_dssp             TTCEEEEETTTSHHHHHHHHHHH-HTTC-EEEEEESSHHHHHHHHHTC------------CCEEEECCTTSHHHHHHHHH
T ss_pred             CCCEEEEECCCChHHHHHHHHHH-HCCC-EEEEEeCChHHHHHHHHHHHhcCccccccCcceEEEEecCCCHHHHHHHHH
Confidence            4678999987 999999999554 5698 577777877665433 3331           112222222 2233333444


Q ss_pred             HHHHHhCCCc-eEEEeCCC
Q 017868          247 KIQKAMGTGI-DVSFDCAG  264 (365)
Q Consensus       247 ~~~~~~~~~~-d~vid~~g  264 (365)
                      .+.+.. +++ |++|.++|
T Consensus        84 ~~~~~~-g~i~d~vi~~Ag  101 (264)
T 2pd6_A           84 QVQACF-SRPPSVVVSCAG  101 (264)
T ss_dssp             HHHHHH-SSCCSEEEECCC
T ss_pred             HHHHHh-CCCCeEEEECCC
Confidence            443323 356 99999887

>2wsb_A Galactitol dehydrogenase; oxidoreductase, SDR, rossmann fold, tagatose; HET: NAD; 1.25A {Rhodobacter sphaeroides} PDB: 2wdz_A* 3lqf_A*

Probab=96.10  E-value=0.041  Score=46.63  Aligned_cols=80  Identities=21%  Similarity=0.325  Sum_probs=50.1

Q ss_pred             CCCEEEEEcC-CHHHHHHHHHHHHHCCCCeEEEEeCChhHHHH-HHHcCCCE--EEeCCCC-cccHHHHHHHHHHHhCCC
Q 017868          181 PETNVLIMGA-GPIGLVTMLGAPRAFGAPRIVIVDVDDYRLSV-AKEIGADN--IVKVSTN-LQDIAEEVEKIQKAMGTG  255 (365)
Q Consensus       181 ~g~~vlI~G~-g~~G~~ai~~l~~~~g~~~vi~v~~~~~~~~~-~~~~g~~~--~~~~~~~-~~~~~~~i~~~~~~~~~~  255 (365)
                      .+.++||+|+ |++|.++++.++ ..|+ .|+.+++++++.+. .++++...  .+..+-. .+++.+.++++.+  .++
T Consensus        10 ~~k~vlITGasggiG~~la~~l~-~~G~-~V~~~~r~~~~~~~~~~~~~~~~~~~~~~D~~~~~~~~~~~~~~~~--~~~   85 (254)
T 2wsb_A           10 DGACAAVTGAGSGIGLEICRAFA-ASGA-RLILIDREAAALDRAAQELGAAVAARIVADVTDAEAMTAAAAEAEA--VAP   85 (254)
T ss_dssp             TTCEEEEETTTSHHHHHHHHHHH-HTTC-EEEEEESCHHHHHHHHHHHGGGEEEEEECCTTCHHHHHHHHHHHHH--HSC
T ss_pred             CCCEEEEECCCcHHHHHHHHHHH-HCCC-EEEEEeCCHHHHHHHHHHhcccceeEEEEecCCHHHHHHHHHHHHh--hCC
Confidence            4678999987 999999999555 5598 57777788776543 34454332  2222222 2233333333333  257


Q ss_pred             ceEEEeCCC
Q 017868          256 IDVSFDCAG  264 (365)
Q Consensus       256 ~d~vid~~g  264 (365)
                      +|++|.++|
T Consensus        86 id~li~~Ag   94 (254)
T 2wsb_A           86 VSILVNSAG   94 (254)
T ss_dssp             CCEEEECCC
T ss_pred             CcEEEECCc
Confidence            999999887

>3sju_A Keto reductase; short-chain dehydrogenase, oxidoreductase; HET: NDP; 2.40A {Streptomyces griseoruber}

Probab=96.08  E-value=0.052  Score=46.91  Aligned_cols=83  Identities=17%  Similarity=0.195  Sum_probs=49.8

Q ss_pred             CCCCEEEEEcC-CHHHHHHHHHHHHHCCCCeEEEEeCChhHHHH-HHH---cCCCE-EEeCCC-CcccHHHHHHHHHHHh
Q 017868          180 GPETNVLIMGA-GPIGLVTMLGAPRAFGAPRIVIVDVDDYRLSV-AKE---IGADN-IVKVST-NLQDIAEEVEKIQKAM  252 (365)
Q Consensus       180 ~~g~~vlI~G~-g~~G~~ai~~l~~~~g~~~vi~v~~~~~~~~~-~~~---~g~~~-~~~~~~-~~~~~~~~i~~~~~~~  252 (365)
                      ..+.++||+|+ +++|.+++..++ ..|+ .|+.+++++++.+. +++   .+... .+..+- +.++....++++.+..
T Consensus        22 ~~~k~~lVTGas~GIG~aia~~la-~~G~-~V~~~~r~~~~~~~~~~~l~~~~~~~~~~~~Dv~d~~~v~~~~~~~~~~~   99 (279)
T 3sju_A           22 SRPQTAFVTGVSSGIGLAVARTLA-ARGI-AVYGCARDAKNVSAAVDGLRAAGHDVDGSSCDVTSTDEVHAAVAAAVERF   99 (279)
T ss_dssp             ---CEEEEESTTSHHHHHHHHHHH-HTTC-EEEEEESCHHHHHHHHHHHHTTTCCEEEEECCTTCHHHHHHHHHHHHHHH
T ss_pred             cCCCEEEEeCCCCHHHHHHHHHHH-HCCC-EEEEEeCCHHHHHHHHHHHHhcCCcEEEEECCCCCHHHHHHHHHHHHHHc
Confidence            45789999987 999999999555 5599 57778888776543 233   34332 222222 2233333444443332


Q ss_pred             CCCceEEEeCCCC
Q 017868          253 GTGIDVSFDCAGL  265 (365)
Q Consensus       253 ~~~~d~vid~~g~  265 (365)
                       +++|++|.++|.
T Consensus       100 -g~id~lv~nAg~  111 (279)
T 3sju_A          100 -GPIGILVNSAGR  111 (279)
T ss_dssp             -CSCCEEEECCCC
T ss_pred             -CCCcEEEECCCC
Confidence             589999998873

>3tox_A Short chain dehydrogenase; structural genomics, PSI-biology, NEW YORK structural genomi research consortium, nysgrc, oxidoreductase; HET: NAP; 1.93A {Sinorhizobium meliloti}

Probab=96.08  E-value=0.025  Score=49.07  Aligned_cols=81  Identities=23%  Similarity=0.280  Sum_probs=49.8

Q ss_pred             CCCEEEEEcC-CHHHHHHHHHHHHHCCCCeEEEEeCChhHHHH-HHHc---CCCEE-EeCCCC-cccHHHHHHHHHHHhC
Q 017868          181 PETNVLIMGA-GPIGLVTMLGAPRAFGAPRIVIVDVDDYRLSV-AKEI---GADNI-VKVSTN-LQDIAEEVEKIQKAMG  253 (365)
Q Consensus       181 ~g~~vlI~G~-g~~G~~ai~~l~~~~g~~~vi~v~~~~~~~~~-~~~~---g~~~~-~~~~~~-~~~~~~~i~~~~~~~~  253 (365)
                      .|.++||+|+ +++|.++++.++ ..|+ +|+.+++++++.+. .+++   +.... +..+-. ..+....++++.+. -
T Consensus         7 ~gk~vlVTGas~GIG~aia~~la-~~G~-~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~Dv~~~~~v~~~~~~~~~~-~   83 (280)
T 3tox_A            7 EGKIAIVTGASSGIGRAAALLFA-REGA-KVVVTARNGNALAELTDEIAGGGGEAAALAGDVGDEALHEALVELAVRR-F   83 (280)
T ss_dssp             TTCEEEESSTTSHHHHHHHHHHH-HTTC-EEEECCSCHHHHHHHHHHHTTTTCCEEECCCCTTCHHHHHHHHHHHHHH-H
T ss_pred             CCCEEEEECCCcHHHHHHHHHHH-HCCC-EEEEEECCHHHHHHHHHHHHhcCCcEEEEECCCCCHHHHHHHHHHHHHH-c
Confidence            5678999987 999999999555 5599 57788888776543 3333   32221 211211 22333333333332 2


Q ss_pred             CCceEEEeCCC
Q 017868          254 TGIDVSFDCAG  264 (365)
Q Consensus       254 ~~~d~vid~~g  264 (365)
                      +++|++|.++|
T Consensus        84 g~iD~lvnnAg   94 (280)
T 3tox_A           84 GGLDTAFNNAG   94 (280)
T ss_dssp             SCCCEEEECCC
T ss_pred             CCCCEEEECCC
Confidence            47999999887

>4gkb_A 3-oxoacyl-[acyl-carrier protein] reductase; putative sugar dehydrogenase, enzyme function initiative, EF structural genomics; 1.50A {Burkholderia multivorans} PDB: 4glo_A*

Probab=96.07  E-value=0.039  Score=47.18  Aligned_cols=82  Identities=13%  Similarity=0.113  Sum_probs=50.7

Q ss_pred             CCCEEEEEcC-CHHHHHHHHHHHHHCCCCeEEEEeCChhHHH---HHHHcCCC-EEEeCC-CCcccHHHHHHHHHHHhCC
Q 017868          181 PETNVLIMGA-GPIGLVTMLGAPRAFGAPRIVIVDVDDYRLS---VAKEIGAD-NIVKVS-TNLQDIAEEVEKIQKAMGT  254 (365)
Q Consensus       181 ~g~~vlI~G~-g~~G~~ai~~l~~~~g~~~vi~v~~~~~~~~---~~~~~g~~-~~~~~~-~~~~~~~~~i~~~~~~~~~  254 (365)
                      +|+++||+|+ +++|.++++.++ ..|+ .|+.+++++++.+   .+.+.+.. ..+..+ .+..+..+.+.+..+.. +
T Consensus         6 ~gKvalVTGas~GIG~aia~~la-~~Ga-~Vv~~~r~~~~~~~~~~~~~~~~~~~~~~~Dv~~~~~v~~~v~~~~~~~-G   82 (258)
T 4gkb_A            6 QDKVVIVTGGASGIGGAISMRLA-EERA-IPVVFARHAPDGAFLDALAQRQPRATYLPVELQDDAQCRDAVAQTIATF-G   82 (258)
T ss_dssp             TTCEEEEETTTSHHHHHHHHHHH-HTTC-EEEEEESSCCCHHHHHHHHHHCTTCEEEECCTTCHHHHHHHHHHHHHHH-S
T ss_pred             CCCEEEEeCCCCHHHHHHHHHHH-HcCC-EEEEEECCcccHHHHHHHHhcCCCEEEEEeecCCHHHHHHHHHHHHHHh-C
Confidence            5788999987 999999999555 5599 5666666654433   23333432 222222 23334444455544433 5


Q ss_pred             CceEEEeCCCC
Q 017868          255 GIDVSFDCAGL  265 (365)
Q Consensus       255 ~~d~vid~~g~  265 (365)
                      ++|++++++|.
T Consensus        83 ~iDiLVNnAGi   93 (258)
T 4gkb_A           83 RLDGLVNNAGV   93 (258)
T ss_dssp             CCCEEEECCCC
T ss_pred             CCCEEEECCCC
Confidence            89999999883

>3f9i_A 3-oxoacyl-[acyl-carrier-protein] reductase; 3-ketoacyl-(acyl-carrier-protein) reductase, FAT biosynthesis, lipid synthesis, NADP; 2.25A {Rickettsia prowazekii} SCOP: c.2.1.0

Probab=96.07  E-value=0.023  Score=48.14  Aligned_cols=81  Identities=17%  Similarity=0.234  Sum_probs=51.5

Q ss_pred             CCCCCEEEEEcC-CHHHHHHHHHHHHHCCCCeEEEEeCChhHHHHH-HHcCCCEE-EeCCCCcccHHHHHHHHHHHhCCC
Q 017868          179 IGPETNVLIMGA-GPIGLVTMLGAPRAFGAPRIVIVDVDDYRLSVA-KEIGADNI-VKVSTNLQDIAEEVEKIQKAMGTG  255 (365)
Q Consensus       179 ~~~g~~vlI~G~-g~~G~~ai~~l~~~~g~~~vi~v~~~~~~~~~~-~~~g~~~~-~~~~~~~~~~~~~i~~~~~~~~~~  255 (365)
                      -.+++++||+|+ +++|.+++..++ ..|+ +|+.+++++++.+.+ +++..... +..+-  .+ .+.+.++.+. -++
T Consensus        11 ~~~~k~vlVTGas~gIG~~~a~~l~-~~G~-~V~~~~r~~~~~~~~~~~~~~~~~~~~~D~--~~-~~~~~~~~~~-~~~   84 (249)
T 3f9i_A           11 DLTGKTSLITGASSGIGSAIARLLH-KLGS-KVIISGSNEEKLKSLGNALKDNYTIEVCNL--AN-KEECSNLISK-TSN   84 (249)
T ss_dssp             CCTTCEEEETTTTSHHHHHHHHHHH-HTTC-EEEEEESCHHHHHHHHHHHCSSEEEEECCT--TS-HHHHHHHHHT-CSC
T ss_pred             cCCCCEEEEECCCChHHHHHHHHHH-HCCC-EEEEEcCCHHHHHHHHHHhccCccEEEcCC--CC-HHHHHHHHHh-cCC
Confidence            357889999987 999999999554 5598 577788887776544 44543322 22222  22 2234444332 257


Q ss_pred             ceEEEeCCCC
Q 017868          256 IDVSFDCAGL  265 (365)
Q Consensus       256 ~d~vid~~g~  265 (365)
                      +|++|.++|.
T Consensus        85 id~li~~Ag~   94 (249)
T 3f9i_A           85 LDILVCNAGI   94 (249)
T ss_dssp             CSEEEECCC-
T ss_pred             CCEEEECCCC
Confidence            9999998883

>4egf_A L-xylulose reductase; structural genomics, ssgcid, seattle structural genomics CEN infectious disease, oxidoreductase; 2.30A {Mycobacterium smegmatis}

Probab=96.07  E-value=0.044  Score=47.01  Aligned_cols=81  Identities=31%  Similarity=0.374  Sum_probs=51.1

Q ss_pred             CCCEEEEEcC-CHHHHHHHHHHHHHCCCCeEEEEeCChhHHHHH-HH----cCCCE-EEeCCC-CcccHHHHHHHHHHHh
Q 017868          181 PETNVLIMGA-GPIGLVTMLGAPRAFGAPRIVIVDVDDYRLSVA-KE----IGADN-IVKVST-NLQDIAEEVEKIQKAM  252 (365)
Q Consensus       181 ~g~~vlI~G~-g~~G~~ai~~l~~~~g~~~vi~v~~~~~~~~~~-~~----~g~~~-~~~~~~-~~~~~~~~i~~~~~~~  252 (365)
                      .+.++||+|+ +++|.++++.++ ..|+ +|+.+++++++.+.+ ++    .+... .+..+- +.++....++++.+..
T Consensus        19 ~~k~vlVTGas~gIG~aia~~l~-~~G~-~V~~~~r~~~~~~~~~~~l~~~~~~~~~~~~~Dv~~~~~v~~~~~~~~~~~   96 (266)
T 4egf_A           19 DGKRALITGATKGIGADIARAFA-AAGA-RLVLSGRDVSELDAARRALGEQFGTDVHTVAIDLAEPDAPAELARRAAEAF   96 (266)
T ss_dssp             TTCEEEETTTTSHHHHHHHHHHH-HTTC-EEEEEESCHHHHHHHHHHHHHHHCCCEEEEECCTTSTTHHHHHHHHHHHHH
T ss_pred             CCCEEEEeCCCcHHHHHHHHHHH-HCCC-EEEEEeCCHHHHHHHHHHHHHhcCCcEEEEEecCCCHHHHHHHHHHHHHHc
Confidence            5688999987 999999999554 5699 577788887665432 22    34322 222222 2334444444444332


Q ss_pred             CCCceEEEeCCC
Q 017868          253 GTGIDVSFDCAG  264 (365)
Q Consensus       253 ~~~~d~vid~~g  264 (365)
                       +++|++|.++|
T Consensus        97 -g~id~lv~nAg  107 (266)
T 4egf_A           97 -GGLDVLVNNAG  107 (266)
T ss_dssp             -TSCSEEEEECC
T ss_pred             -CCCCEEEECCC
Confidence             58999999887

>1xhl_A Short-chain dehydrogenase/reductase family member putative tropinone reductase-II...; parallel beta-sheet of seven strands in the order 3214567; HET: NDP TNE; 2.40A {Caenorhabditis elegans} SCOP: c.2.1.2

Probab=96.07  E-value=0.026  Score=49.35  Aligned_cols=81  Identities=21%  Similarity=0.299  Sum_probs=49.5

Q ss_pred             CCCEEEEEcC-CHHHHHHHHHHHHHCCCCeEEEEeCChhHHHHH-H---HcCC---C-EEEeCCC-CcccHHHHHHHHHH
Q 017868          181 PETNVLIMGA-GPIGLVTMLGAPRAFGAPRIVIVDVDDYRLSVA-K---EIGA---D-NIVKVST-NLQDIAEEVEKIQK  250 (365)
Q Consensus       181 ~g~~vlI~G~-g~~G~~ai~~l~~~~g~~~vi~v~~~~~~~~~~-~---~~g~---~-~~~~~~~-~~~~~~~~i~~~~~  250 (365)
                      .+.++||+|+ +++|.++++.++ ..|+ .|+.+++++++.+.+ +   +.+.   . ..+..+- +.+++...+++..+
T Consensus        25 ~~k~vlVTGas~gIG~aia~~L~-~~G~-~V~~~~r~~~~~~~~~~~l~~~~~~~~~~~~~~~Dv~d~~~v~~~~~~~~~  102 (297)
T 1xhl_A           25 SGKSVIITGSSNGIGRSAAVIFA-KEGA-QVTITGRNEDRLEETKQQILKAGVPAEKINAVVADVTEASGQDDIINTTLA  102 (297)
T ss_dssp             TTCEEEETTCSSHHHHHHHHHHH-HTTC-EEEEEESCHHHHHHHHHHHHHTTCCGGGEEEEECCTTSHHHHHHHHHHHHH
T ss_pred             CCCEEEEeCCCcHHHHHHHHHHH-HCCC-EEEEEeCCHHHHHHHHHHHHhcCCCCceEEEEecCCCCHHHHHHHHHHHHH
Confidence            4678999987 999999999555 5599 577777887665432 2   2232   1 2222222 22333334444333


Q ss_pred             HhCCCceEEEeCCC
Q 017868          251 AMGTGIDVSFDCAG  264 (365)
Q Consensus       251 ~~~~~~d~vid~~g  264 (365)
                      .. +++|++|.++|
T Consensus       103 ~~-g~iD~lvnnAG  115 (297)
T 1xhl_A          103 KF-GKIDILVNNAG  115 (297)
T ss_dssp             HH-SCCCEEEECCC
T ss_pred             hc-CCCCEEEECCC
Confidence            22 48999999887

>3eey_A Putative rRNA methylase; rRNA methylation, S-adenosyl-methionine, structural genomics structure initiative, PSI; HET: SAM; 2.20A {Clostridium thermocellum atcc 27405}

Probab=96.06  E-value=0.018  Score=46.74  Aligned_cols=102  Identities=16%  Similarity=0.236  Sum_probs=65.5

Q ss_pred             hcCCCCCCEEEEEcCCHHHHHHHHHHHHHCC-CCeEEEEeCChhHHHHHHH----cCC-CEEEeCCCCcccHHHHHHHHH
Q 017868          176 RANIGPETNVLIMGAGPIGLVTMLGAPRAFG-APRIVIVDVDDYRLSVAKE----IGA-DNIVKVSTNLQDIAEEVEKIQ  249 (365)
Q Consensus       176 ~~~~~~g~~vlI~G~g~~G~~ai~~l~~~~g-~~~vi~v~~~~~~~~~~~~----~g~-~~~~~~~~~~~~~~~~i~~~~  249 (365)
                      ...++++++||-.|+|. |..+.. +++..+ ...+++++.+++..+.+++    .+. ..+.....+..++..      
T Consensus        17 ~~~~~~~~~vLDlGcG~-G~~~~~-l~~~~~~~~~v~~vD~s~~~~~~a~~~~~~~~~~~~v~~~~~d~~~~~~------   88 (197)
T 3eey_A           17 KMFVKEGDTVVDATCGN-GNDTAF-LASLVGENGRVFGFDIQDKAIANTTKKLTDLNLIDRVTLIKDGHQNMDK------   88 (197)
T ss_dssp             HHHCCTTCEEEESCCTT-SHHHHH-HHHHHCTTCEEEEECSCHHHHHHHHHHHHHTTCGGGEEEECSCGGGGGG------
T ss_pred             HhcCCCCCEEEEcCCCC-CHHHHH-HHHHhCCCCEEEEEECCHHHHHHHHHHHHHcCCCCCeEEEECCHHHHhh------
Confidence            34568899999998765 666667 666643 3389999999887766544    343 222222222222211      


Q ss_pred             HHhCCCceEEEeCCCC---------------HHHHHHHHHhcccCCEEEEEc
Q 017868          250 KAMGTGIDVSFDCAGL---------------NKTMSTALGATCAGGKVCLVG  286 (365)
Q Consensus       250 ~~~~~~~d~vid~~g~---------------~~~~~~~~~~l~~~G~~~~~g  286 (365)
                       .....+|+|+...+-               ...+..+.+.|+++|.+++..
T Consensus        89 -~~~~~fD~v~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~Lk~gG~l~~~~  139 (197)
T 3eey_A           89 -YIDCPVKAVMFNLGYLPSGDHSISTRPETTIQALSKAMELLVTGGIITVVI  139 (197)
T ss_dssp             -TCCSCEEEEEEEESBCTTSCTTCBCCHHHHHHHHHHHHHHEEEEEEEEEEE
T ss_pred             -hccCCceEEEEcCCcccCcccccccCcccHHHHHHHHHHhCcCCCEEEEEE
Confidence             124689999865422               246778899999999998764

>2pbf_A Protein-L-isoaspartate O-methyltransferase beta-A methyltransferase; protein repair, isoaspartyl formation, P. falciparum; HET: SAH; 2.00A {Plasmodium falciparum}

Probab=96.05  E-value=0.053  Score=45.11  Aligned_cols=101  Identities=15%  Similarity=0.161  Sum_probs=65.3

Q ss_pred             CCCCCCEEEEEcCCHHHHHHHHHHHHHCC-----CCeEEEEeCChhHHHHHHHc----C-----CCEEEeCCCCccc-HH
Q 017868          178 NIGPETNVLIMGAGPIGLVTMLGAPRAFG-----APRIVIVDVDDYRLSVAKEI----G-----ADNIVKVSTNLQD-IA  242 (365)
Q Consensus       178 ~~~~g~~vlI~G~g~~G~~ai~~l~~~~g-----~~~vi~v~~~~~~~~~~~~~----g-----~~~~~~~~~~~~~-~~  242 (365)
                      .++++++||-.|+|. |..+.. +++..+     ...+++++.+++..+.+++.    +     ...+.....+..+ +.
T Consensus        77 ~~~~~~~VLdiG~G~-G~~~~~-la~~~~~~~~~~~~v~~vD~~~~~~~~a~~~~~~~~~~~~~~~~v~~~~~d~~~~~~  154 (227)
T 2pbf_A           77 VLKPGSRAIDVGSGS-GYLTVC-MAIKMNVLENKNSYVIGLERVKDLVNFSLENIKRDKPELLKIDNFKIIHKNIYQVNE  154 (227)
T ss_dssp             TSCTTCEEEEESCTT-SHHHHH-HHHHTTTTTCTTCEEEEEESCHHHHHHHHHHHHHHCGGGGSSTTEEEEECCGGGCCH
T ss_pred             hCCCCCEEEEECCCC-CHHHHH-HHHHhcccCCCCCEEEEEeCCHHHHHHHHHHHHHcCccccccCCEEEEECChHhccc
Confidence            578999999999865 777777 777655     23799999999877766543    3     1212111111111 11


Q ss_pred             HHHHHHHHHhCCCceEEEeCCCCHHHHHHHHHhcccCCEEEEE
Q 017868          243 EEVEKIQKAMGTGIDVSFDCAGLNKTMSTALGATCAGGKVCLV  285 (365)
Q Consensus       243 ~~i~~~~~~~~~~~d~vid~~g~~~~~~~~~~~l~~~G~~~~~  285 (365)
                      ...   ..  ...+|+|+........+..+.+.|+++|++++.
T Consensus       155 ~~~---~~--~~~fD~I~~~~~~~~~~~~~~~~LkpgG~lv~~  192 (227)
T 2pbf_A          155 EEK---KE--LGLFDAIHVGASASELPEILVDLLAENGKLIIP  192 (227)
T ss_dssp             HHH---HH--HCCEEEEEECSBBSSCCHHHHHHEEEEEEEEEE
T ss_pred             ccC---cc--CCCcCEEEECCchHHHHHHHHHhcCCCcEEEEE
Confidence            100   11  357999998666544567888999999998875

>1o5i_A 3-oxoacyl-(acyl carrier protein) reductase; TM1169, structur genomics, JCSG, PSI, protein structure initiative, joint CE structural genomics; HET: NAD; 2.50A {Thermotoga maritima} SCOP: c.2.1.2

Probab=96.05  E-value=0.044  Score=46.48  Aligned_cols=73  Identities=23%  Similarity=0.248  Sum_probs=46.6

Q ss_pred             CCCCEEEEEcC-CHHHHHHHHHHHHHCCCCeEEEEeCChhHHHHHHHcCCCEEEeCCCCcccHHHHHHHHHHHhCCCceE
Q 017868          180 GPETNVLIMGA-GPIGLVTMLGAPRAFGAPRIVIVDVDDYRLSVAKEIGADNIVKVSTNLQDIAEEVEKIQKAMGTGIDV  258 (365)
Q Consensus       180 ~~g~~vlI~G~-g~~G~~ai~~l~~~~g~~~vi~v~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~i~~~~~~~~~~~d~  258 (365)
                      -.+.++||+|+ |++|.++++.++ ..|+ .|+.++++++.   +++++....+ .+- .++....++++     .++|+
T Consensus        17 ~~~k~vlVTGas~gIG~~~a~~l~-~~G~-~V~~~~r~~~~---~~~~~~~~~~-~D~-~~~~~~~~~~~-----~~iD~   84 (249)
T 1o5i_A           17 IRDKGVLVLAASRGIGRAVADVLS-QEGA-EVTICARNEEL---LKRSGHRYVV-CDL-RKDLDLLFEKV-----KEVDI   84 (249)
T ss_dssp             CTTCEEEEESCSSHHHHHHHHHHH-HTTC-EEEEEESCHHH---HHHTCSEEEE-CCT-TTCHHHHHHHS-----CCCSE
T ss_pred             cCCCEEEEECCCCHHHHHHHHHHH-HCCC-EEEEEcCCHHH---HHhhCCeEEE-eeH-HHHHHHHHHHh-----cCCCE
Confidence            46789999987 999999999554 5698 57777777643   3444522222 222 22333333222     38999


Q ss_pred             EEeCCC
Q 017868          259 SFDCAG  264 (365)
Q Consensus       259 vid~~g  264 (365)
                      +|.++|
T Consensus        85 lv~~Ag   90 (249)
T 1o5i_A           85 LVLNAG   90 (249)
T ss_dssp             EEECCC
T ss_pred             EEECCC
Confidence            999887

>1geg_A Acetoin reductase; SDR family, oxidoreductase; HET: GLC NAD; 1.70A {Klebsiella pneumoniae} SCOP: c.2.1.2

Probab=96.05  E-value=0.069  Score=45.41  Aligned_cols=80  Identities=29%  Similarity=0.360  Sum_probs=49.0

Q ss_pred             CCEEEEEcC-CHHHHHHHHHHHHHCCCCeEEEEeCChhHHHHH-HH---cCCCE-EEeCCC-CcccHHHHHHHHHHHhCC
Q 017868          182 ETNVLIMGA-GPIGLVTMLGAPRAFGAPRIVIVDVDDYRLSVA-KE---IGADN-IVKVST-NLQDIAEEVEKIQKAMGT  254 (365)
Q Consensus       182 g~~vlI~G~-g~~G~~ai~~l~~~~g~~~vi~v~~~~~~~~~~-~~---~g~~~-~~~~~~-~~~~~~~~i~~~~~~~~~  254 (365)
                      +.++||+|+ |++|.++++.++ ..|+ .|+.+++++++.+.+ ++   .+... .+..+- +.+++.+.+++..+. -+
T Consensus         2 ~k~vlVTGas~gIG~~ia~~l~-~~G~-~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~D~~~~~~v~~~~~~~~~~-~g   78 (256)
T 1geg_A            2 KKVALVTGAGQGIGKAIALRLV-KDGF-AVAIADYNDATAKAVASEINQAGGHAVAVKVDVSDRDQVFAAVEQARKT-LG   78 (256)
T ss_dssp             CCEEEEETTTSHHHHHHHHHHH-HTTC-EEEEEESCHHHHHHHHHHHHHTTCCEEEEECCTTSHHHHHHHHHHHHHH-TT
T ss_pred             CCEEEEECCCChHHHHHHHHHH-HCCC-EEEEEeCCHHHHHHHHHHHHhcCCcEEEEEecCCCHHHHHHHHHHHHHH-hC
Confidence            468999987 999999999554 5698 577777877655432 22   34322 222222 223333444444332 35


Q ss_pred             CceEEEeCCC
Q 017868          255 GIDVSFDCAG  264 (365)
Q Consensus       255 ~~d~vid~~g  264 (365)
                      ++|++|.++|
T Consensus        79 ~id~lv~nAg   88 (256)
T 1geg_A           79 GFDVIVNNAG   88 (256)
T ss_dssp             CCCEEEECCC
T ss_pred             CCCEEEECCC
Confidence            8999999887

>1wma_A Carbonyl reductase [NADPH] 1; oxidoreductase; HET: AB3 NDP PE5 P33; 1.24A {Homo sapiens} SCOP: c.2.1.2 PDB: 3bhi_A* 3bhj_A* 3bhm_A* 2pfg_A* 1n5d_A* 2hrb_A*

Probab=96.04  E-value=0.05  Score=46.58  Aligned_cols=82  Identities=24%  Similarity=0.320  Sum_probs=49.8

Q ss_pred             CCCEEEEEcC-CHHHHHHHHHHHHHCCCCeEEEEeCChhHHH-HHHH---cCC-CEEEeCCCC-cccHHHHHHHHHHHhC
Q 017868          181 PETNVLIMGA-GPIGLVTMLGAPRAFGAPRIVIVDVDDYRLS-VAKE---IGA-DNIVKVSTN-LQDIAEEVEKIQKAMG  253 (365)
Q Consensus       181 ~g~~vlI~G~-g~~G~~ai~~l~~~~g~~~vi~v~~~~~~~~-~~~~---~g~-~~~~~~~~~-~~~~~~~i~~~~~~~~  253 (365)
                      ++.++||+|+ |++|.+++..+++..|+ .|+.++++.++.+ ..++   .+. ...+..+-. ..++...++++.+.. 
T Consensus         3 ~~k~vlITGasggIG~~~a~~L~~~~g~-~V~~~~r~~~~~~~~~~~l~~~~~~~~~~~~Dl~~~~~~~~~~~~~~~~~-   80 (276)
T 1wma_A            3 GIHVALVTGGNKGIGLAIVRDLCRLFSG-DVVLTARDVTRGQAAVQQLQAEGLSPRFHQLDIDDLQSIRALRDFLRKEY-   80 (276)
T ss_dssp             CCCEEEESSCSSHHHHHHHHHHHHHSSS-EEEEEESSHHHHHHHHHHHHHTTCCCEEEECCTTCHHHHHHHHHHHHHHH-
T ss_pred             CCCEEEEeCCCcHHHHHHHHHHHHhcCC-eEEEEeCChHHHHHHHHHHHhcCCeeEEEECCCCCHHHHHHHHHHHHHhc-
Confidence            5678999987 99999999966653798 5777777766543 2222   232 222332222 233333344333322 


Q ss_pred             CCceEEEeCCC
Q 017868          254 TGIDVSFDCAG  264 (365)
Q Consensus       254 ~~~d~vid~~g  264 (365)
                      +++|++|.++|
T Consensus        81 g~id~li~~Ag   91 (276)
T 1wma_A           81 GGLDVLVNNAG   91 (276)
T ss_dssp             SSEEEEEECCC
T ss_pred             CCCCEEEECCc
Confidence            47999999887

>3oid_A Enoyl-[acyl-carrier-protein] reductase [NADPH]; fatty acid synthesis, enoyl-ACP reductases, FABL, rossmann-L NADPH binding, oxidoreductase; HET: TCL NDP; 1.80A {Bacillus subtilis} PDB: 3oic_A*

Probab=96.03  E-value=0.036  Score=47.37  Aligned_cols=82  Identities=16%  Similarity=0.232  Sum_probs=49.3

Q ss_pred             CCCEEEEEcC-CHHHHHHHHHHHHHCCCCeEEEEeCChhHHHHH----HHcCCCE-EEeCCC-CcccHHHHHHHHHHHhC
Q 017868          181 PETNVLIMGA-GPIGLVTMLGAPRAFGAPRIVIVDVDDYRLSVA----KEIGADN-IVKVST-NLQDIAEEVEKIQKAMG  253 (365)
Q Consensus       181 ~g~~vlI~G~-g~~G~~ai~~l~~~~g~~~vi~v~~~~~~~~~~----~~~g~~~-~~~~~~-~~~~~~~~i~~~~~~~~  253 (365)
                      ++.++||+|+ +++|.++++.++ ..|+++++...+++++.+.+    ++.+... .+..+- +.++..+.++++.+.. 
T Consensus         3 ~~k~vlVTGas~gIG~aia~~l~-~~G~~vv~~~~r~~~~~~~~~~~~~~~~~~~~~~~~Dv~~~~~v~~~~~~~~~~~-   80 (258)
T 3oid_A            3 QNKCALVTGSSRGVGKAAAIRLA-ENGYNIVINYARSKKAALETAEEIEKLGVKVLVVKANVGQPAKIKEMFQQIDETF-   80 (258)
T ss_dssp             CCCEEEESSCSSHHHHHHHHHHH-HTTCEEEEEESSCHHHHHHHHHHHHTTTCCEEEEECCTTCHHHHHHHHHHHHHHH-
T ss_pred             CCCEEEEecCCchHHHHHHHHHH-HCCCEEEEEcCCCHHHHHHHHHHHHhcCCcEEEEEcCCCCHHHHHHHHHHHHHHc-
Confidence            5788999987 999999999554 56995444447776654432    2334332 222222 2233333444443332 


Q ss_pred             CCceEEEeCCC
Q 017868          254 TGIDVSFDCAG  264 (365)
Q Consensus       254 ~~~d~vid~~g  264 (365)
                      +++|++|.++|
T Consensus        81 g~id~lv~nAg   91 (258)
T 3oid_A           81 GRLDVFVNNAA   91 (258)
T ss_dssp             SCCCEEEECCC
T ss_pred             CCCCEEEECCC
Confidence            57999999987

>3v2h_A D-beta-hydroxybutyrate dehydrogenase; structural genomics, PSI-biology, NEW YORK structural genomi research consortium, nysgrc; 3.00A {Sinorhizobium meliloti}

Probab=96.02  E-value=0.071  Score=46.15  Aligned_cols=82  Identities=20%  Similarity=0.257  Sum_probs=48.2

Q ss_pred             CCCEEEEEcC-CHHHHHHHHHHHHHCCCCeEEEEeC-ChhHHHH-HHHc----CCCE-EEeCCC-CcccHHHHHHHHHHH
Q 017868          181 PETNVLIMGA-GPIGLVTMLGAPRAFGAPRIVIVDV-DDYRLSV-AKEI----GADN-IVKVST-NLQDIAEEVEKIQKA  251 (365)
Q Consensus       181 ~g~~vlI~G~-g~~G~~ai~~l~~~~g~~~vi~v~~-~~~~~~~-~~~~----g~~~-~~~~~~-~~~~~~~~i~~~~~~  251 (365)
                      .+.++||+|+ +++|.++++.++ ..|+ +|+.+++ ++++.+. .+++    +... .+..+- +.+++.+.++++.+.
T Consensus        24 ~~k~~lVTGas~GIG~~ia~~la-~~G~-~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~~Dv~d~~~v~~~~~~~~~~  101 (281)
T 3v2h_A           24 MTKTAVITGSTSGIGLAIARTLA-KAGA-NIVLNGFGAPDEIRTVTDEVAGLSSGTVLHHPADMTKPSEIADMMAMVADR  101 (281)
T ss_dssp             TTCEEEEETCSSHHHHHHHHHHH-HTTC-EEEEECCCCHHHHHHHHHHHHTTCSSCEEEECCCTTCHHHHHHHHHHHHHH
T ss_pred             CCCEEEEeCCCcHHHHHHHHHHH-HCCC-EEEEEeCCChHHHHHHHHHHhhccCCcEEEEeCCCCCHHHHHHHHHHHHHH
Confidence            4678999987 999999999555 5699 5777766 4444332 2222    2222 222222 223333344444332


Q ss_pred             hCCCceEEEeCCCC
Q 017868          252 MGTGIDVSFDCAGL  265 (365)
Q Consensus       252 ~~~~~d~vid~~g~  265 (365)
                       -+++|++|.++|.
T Consensus       102 -~g~iD~lv~nAg~  114 (281)
T 3v2h_A          102 -FGGADILVNNAGV  114 (281)
T ss_dssp             -TSSCSEEEECCCC
T ss_pred             -CCCCCEEEECCCC
Confidence             3589999998883

>3m1a_A Putative dehydrogenase; short, PSI, MCSG, structural genomics, midwest center for structural genomics, protein structure initiative; 2.00A {Streptomyces avermitilis}

Probab=96.02  E-value=0.03  Score=48.39  Aligned_cols=81  Identities=16%  Similarity=0.144  Sum_probs=50.7

Q ss_pred             CCCEEEEEcC-CHHHHHHHHHHHHHCCCCeEEEEeCChhHHH-HHHHcCCCE-EEeCCC-CcccHHHHHHHHHHHhCCCc
Q 017868          181 PETNVLIMGA-GPIGLVTMLGAPRAFGAPRIVIVDVDDYRLS-VAKEIGADN-IVKVST-NLQDIAEEVEKIQKAMGTGI  256 (365)
Q Consensus       181 ~g~~vlI~G~-g~~G~~ai~~l~~~~g~~~vi~v~~~~~~~~-~~~~~g~~~-~~~~~~-~~~~~~~~i~~~~~~~~~~~  256 (365)
                      .+.++||+|+ |++|.++++.+ ...|+ +|++++++.++.+ ..++++... .+..+- +..++...+.++.+. .+++
T Consensus         4 ~~k~vlVTGas~gIG~~~a~~l-~~~G~-~V~~~~r~~~~~~~~~~~~~~~~~~~~~Dv~~~~~~~~~~~~~~~~-~g~i   80 (281)
T 3m1a_A            4 SAKVWLVTGASSGFGRAIAEAA-VAAGD-TVIGTARRTEALDDLVAAYPDRAEAISLDVTDGERIDVVAADVLAR-YGRV   80 (281)
T ss_dssp             CCCEEEETTTTSHHHHHHHHHH-HHTTC-EEEEEESSGGGGHHHHHHCTTTEEEEECCTTCHHHHHHHHHHHHHH-HSCC
T ss_pred             CCcEEEEECCCChHHHHHHHHH-HHCCC-EEEEEeCCHHHHHHHHHhccCCceEEEeeCCCHHHHHHHHHHHHHh-CCCC
Confidence            4678999987 99999999945 45698 5777777776654 445555322 222222 223333334443332 2479


Q ss_pred             eEEEeCCC
Q 017868          257 DVSFDCAG  264 (365)
Q Consensus       257 d~vid~~g  264 (365)
                      |++|.++|
T Consensus        81 d~lv~~Ag   88 (281)
T 3m1a_A           81 DVLVNNAG   88 (281)
T ss_dssp             SEEEECCC
T ss_pred             CEEEECCC
Confidence            99999987

>1w6u_A 2,4-dienoyl-COA reductase, mitochondrial precursor; short chain dehydrogenase, beta- oxidation, NADP, oxidoreductase; HET: HXC NAP; 1.75A {Homo sapiens} SCOP: c.2.1.2 PDB: 1w73_A* 1w8d_A*

Probab=96.01  E-value=0.075  Score=46.33  Aligned_cols=81  Identities=17%  Similarity=0.205  Sum_probs=49.8

Q ss_pred             CCCEEEEEcC-CHHHHHHHHHHHHHCCCCeEEEEeCChhHHHH-HHHc----CCCE-EEeCCCC-cccHHHHHHHHHHHh
Q 017868          181 PETNVLIMGA-GPIGLVTMLGAPRAFGAPRIVIVDVDDYRLSV-AKEI----GADN-IVKVSTN-LQDIAEEVEKIQKAM  252 (365)
Q Consensus       181 ~g~~vlI~G~-g~~G~~ai~~l~~~~g~~~vi~v~~~~~~~~~-~~~~----g~~~-~~~~~~~-~~~~~~~i~~~~~~~  252 (365)
                      .+.++||+|+ |++|.+++..++ ..|+ .|+.+++++++.+. .+++    +... .+..+-. .+++...++...+. 
T Consensus        25 ~~k~vlITGasggiG~~la~~L~-~~G~-~V~~~~r~~~~~~~~~~~l~~~~~~~~~~~~~Dl~~~~~~~~~~~~~~~~-  101 (302)
T 1w6u_A           25 QGKVAFITGGGTGLGKGMTTLLS-SLGA-QCVIASRKMDVLKATAEQISSQTGNKVHAIQCDVRDPDMVQNTVSELIKV-  101 (302)
T ss_dssp             TTCEEEEETTTSHHHHHHHHHHH-HTTC-EEEEEESCHHHHHHHHHHHHHHHSSCEEEEECCTTCHHHHHHHHHHHHHH-
T ss_pred             CCCEEEEECCCchHHHHHHHHHH-HCCC-EEEEEeCCHHHHHHHHHHHHHhcCCceEEEEeCCCCHHHHHHHHHHHHHH-
Confidence            4678999987 999999999554 5698 57777787766542 2322    4322 2222222 23333333333332 


Q ss_pred             CCCceEEEeCCC
Q 017868          253 GTGIDVSFDCAG  264 (365)
Q Consensus       253 ~~~~d~vid~~g  264 (365)
                      .+.+|++|.++|
T Consensus       102 ~g~id~li~~Ag  113 (302)
T 1w6u_A          102 AGHPNIVINNAA  113 (302)
T ss_dssp             TCSCSEEEECCC
T ss_pred             cCCCCEEEECCC
Confidence            358999999887

>3d3w_A L-xylulose reductase; uronate cycle, short-chain dehydrogenase/reductase(SDR) superfamily, glucose metabolism, acetylation, carbohydrate metabolism; HET: NAP; 1.87A {Homo sapiens} PDB: 1wnt_A* 1pr9_A*

Probab=96.01  E-value=0.035  Score=46.77  Aligned_cols=78  Identities=28%  Similarity=0.260  Sum_probs=49.7

Q ss_pred             CCCEEEEEcC-CHHHHHHHHHHHHHCCCCeEEEEeCChhHHHH-HHHcCCCEEEeCCCCcccHHHHHHHHHHHhCCCceE
Q 017868          181 PETNVLIMGA-GPIGLVTMLGAPRAFGAPRIVIVDVDDYRLSV-AKEIGADNIVKVSTNLQDIAEEVEKIQKAMGTGIDV  258 (365)
Q Consensus       181 ~g~~vlI~G~-g~~G~~ai~~l~~~~g~~~vi~v~~~~~~~~~-~~~~g~~~~~~~~~~~~~~~~~i~~~~~~~~~~~d~  258 (365)
                      ++.++||+|+ |++|.++++.+ ...|+ .|+++++++++.+. .+++.....+..+-  .+. +.+++..+ .-+++|+
T Consensus         6 ~~k~vlITGasggiG~~~a~~l-~~~G~-~V~~~~r~~~~~~~~~~~~~~~~~~~~D~--~~~-~~~~~~~~-~~~~id~   79 (244)
T 3d3w_A            6 AGRRVLVTGAGKGIGRGTVQAL-HATGA-RVVAVSRTQADLDSLVRECPGIEPVCVDL--GDW-EATERALG-SVGPVDL   79 (244)
T ss_dssp             TTCEEEEESTTSHHHHHHHHHH-HHTTC-EEEEEESCHHHHHHHHHHSTTCEEEECCT--TCH-HHHHHHHT-TCCCCCE
T ss_pred             CCcEEEEECCCcHHHHHHHHHH-HHCCC-EEEEEeCCHHHHHHHHHHcCCCCEEEEeC--CCH-HHHHHHHH-HcCCCCE
Confidence            4678999987 99999999945 45698 57777788776553 34443333333322  222 23443332 1247999


Q ss_pred             EEeCCC
Q 017868          259 SFDCAG  264 (365)
Q Consensus       259 vid~~g  264 (365)
                      +|.++|
T Consensus        80 vi~~Ag   85 (244)
T 3d3w_A           80 LVNNAA   85 (244)
T ss_dssp             EEECCC
T ss_pred             EEECCc
Confidence            999887

>1vl8_A Gluconate 5-dehydrogenase; TM0441, structural genomics, JCSG structure initiative, PSI, joint center for structural GENO oxidoreductase; HET: NAP; 2.07A {Thermotoga maritima} SCOP: c.2.1.2

Probab=96.01  E-value=0.064  Score=46.00  Aligned_cols=82  Identities=17%  Similarity=0.323  Sum_probs=50.4

Q ss_pred             CCCCEEEEEcC-CHHHHHHHHHHHHHCCCCeEEEEeCChhHHHH-HHHc----CCCE-EEeCCC-CcccHHHHHHHHHHH
Q 017868          180 GPETNVLIMGA-GPIGLVTMLGAPRAFGAPRIVIVDVDDYRLSV-AKEI----GADN-IVKVST-NLQDIAEEVEKIQKA  251 (365)
Q Consensus       180 ~~g~~vlI~G~-g~~G~~ai~~l~~~~g~~~vi~v~~~~~~~~~-~~~~----g~~~-~~~~~~-~~~~~~~~i~~~~~~  251 (365)
                      -.+.++||+|+ |++|.++++.++ ..|+ .|+.+++++++.+. .+++    +... .+..+- +.+++...+++..+.
T Consensus        19 l~~k~~lVTGas~gIG~~ia~~l~-~~G~-~V~~~~r~~~~~~~~~~~l~~~~~~~~~~~~~Dl~~~~~v~~~~~~~~~~   96 (267)
T 1vl8_A           19 LRGRVALVTGGSRGLGFGIAQGLA-EAGC-SVVVASRNLEEASEAAQKLTEKYGVETMAFRCDVSNYEEVKKLLEAVKEK   96 (267)
T ss_dssp             CTTCEEEEETTTSHHHHHHHHHHH-HTTC-EEEEEESCHHHHHHHHHHHHHHHCCCEEEEECCTTCHHHHHHHHHHHHHH
T ss_pred             CCCCEEEEECCCCHHHHHHHHHHH-HCCC-EEEEEeCCHHHHHHHHHHHHHhcCCeEEEEEcCCCCHHHHHHHHHHHHHH
Confidence            35688999987 999999999555 5698 57777787766442 2322    5432 222222 223333344443332


Q ss_pred             hCCCceEEEeCCC
Q 017868          252 MGTGIDVSFDCAG  264 (365)
Q Consensus       252 ~~~~~d~vid~~g  264 (365)
                      . +++|++|.++|
T Consensus        97 ~-g~iD~lvnnAg  108 (267)
T 1vl8_A           97 F-GKLDTVVNAAG  108 (267)
T ss_dssp             H-SCCCEEEECCC
T ss_pred             c-CCCCEEEECCC
Confidence            2 47999999887

>1lss_A TRK system potassium uptake protein TRKA homolog; KTN domain, NAD, RCK domain, potassium transport, potassium channel, KTRA; HET: NAD; 2.30A {Methanocaldococcus jannaschii} SCOP: c.2.1.9

Probab=96.00  E-value=0.17  Score=38.09  Aligned_cols=76  Identities=24%  Similarity=0.289  Sum_probs=49.6

Q ss_pred             CCEEEEEcCCHHHHHHHHHHHHHCCCCeEEEEeCChhHHHHHH-HcCCCEEEeCCCCcccHHHHHHHHHHHhCCCceEEE
Q 017868          182 ETNVLIMGAGPIGLVTMLGAPRAFGAPRIVIVDVDDYRLSVAK-EIGADNIVKVSTNLQDIAEEVEKIQKAMGTGIDVSF  260 (365)
Q Consensus       182 g~~vlI~G~g~~G~~ai~~l~~~~g~~~vi~v~~~~~~~~~~~-~~g~~~~~~~~~~~~~~~~~i~~~~~~~~~~~d~vi  260 (365)
                      +.+|+|.|+|.+|..+++ .+...|. .|+++++++++.+.+. .++... +..+.  .+. +.+.+   ..-.++|+||
T Consensus         4 ~m~i~IiG~G~iG~~~a~-~L~~~g~-~v~~~d~~~~~~~~~~~~~~~~~-~~~d~--~~~-~~l~~---~~~~~~d~vi   74 (140)
T 1lss_A            4 GMYIIIAGIGRVGYTLAK-SLSEKGH-DIVLIDIDKDICKKASAEIDALV-INGDC--TKI-KTLED---AGIEDADMYI   74 (140)
T ss_dssp             -CEEEEECCSHHHHHHHH-HHHHTTC-EEEEEESCHHHHHHHHHHCSSEE-EESCT--TSH-HHHHH---TTTTTCSEEE
T ss_pred             CCEEEEECCCHHHHHHHH-HHHhCCC-eEEEEECCHHHHHHHHHhcCcEE-EEcCC--CCH-HHHHH---cCcccCCEEE
Confidence            468999999999999999 5556687 5788888888776654 456532 22111  121 12221   1135799999


Q ss_pred             eCCCCH
Q 017868          261 DCAGLN  266 (365)
Q Consensus       261 d~~g~~  266 (365)
                      .+++..
T Consensus        75 ~~~~~~   80 (140)
T 1lss_A           75 AVTGKE   80 (140)
T ss_dssp             ECCSCH
T ss_pred             EeeCCc
Confidence            999875

>2bgk_A Rhizome secoisolariciresinol dehydrogenase; oxidoreductase; 1.6A {Podophyllum peltatum} SCOP: c.2.1.2 PDB: 2bgl_A* 2bgm_A*

Probab=96.00  E-value=0.047  Score=46.94  Aligned_cols=81  Identities=26%  Similarity=0.391  Sum_probs=49.5

Q ss_pred             CCCEEEEEcC-CHHHHHHHHHHHHHCCCCeEEEEeCChhHHH-HHHHcCC---CEEEeCCC-CcccHHHHHHHHHHHhCC
Q 017868          181 PETNVLIMGA-GPIGLVTMLGAPRAFGAPRIVIVDVDDYRLS-VAKEIGA---DNIVKVST-NLQDIAEEVEKIQKAMGT  254 (365)
Q Consensus       181 ~g~~vlI~G~-g~~G~~ai~~l~~~~g~~~vi~v~~~~~~~~-~~~~~g~---~~~~~~~~-~~~~~~~~i~~~~~~~~~  254 (365)
                      .+.++||+|+ |++|.++++.++ ..|+ .|+.+++++++.+ ..++++.   ...+..+- +.+++...++++.+. .+
T Consensus        15 ~~k~vlITGasggiG~~~a~~l~-~~G~-~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~D~~~~~~~~~~~~~~~~~-~~   91 (278)
T 2bgk_A           15 QDKVAIITGGAGGIGETTAKLFV-RYGA-KVVIADIADDHGQKVCNNIGSPDVISFVHCDVTKDEDVRNLVDTTIAK-HG   91 (278)
T ss_dssp             TTCEEEEESTTSHHHHHHHHHHH-HTTC-EEEEEESCHHHHHHHHHHHCCTTTEEEEECCTTCHHHHHHHHHHHHHH-HS
T ss_pred             cCCEEEEECCCCHHHHHHHHHHH-HCCC-EEEEEcCChhHHHHHHHHhCCCCceEEEECCCCCHHHHHHHHHHHHHH-cC
Confidence            4678999987 999999999555 5598 5777777776544 3344432   12222222 222333333333332 24


Q ss_pred             CceEEEeCCC
Q 017868          255 GIDVSFDCAG  264 (365)
Q Consensus       255 ~~d~vid~~g  264 (365)
                      ++|++|.++|
T Consensus        92 ~id~li~~Ag  101 (278)
T 2bgk_A           92 KLDIMFGNVG  101 (278)
T ss_dssp             CCCEEEECCC
T ss_pred             CCCEEEECCc
Confidence            7999999887

>2pnf_A 3-oxoacyl-[acyl-carrier-protein] reductase; short chain oxidoreductase, rossmann fold, oxidoreductase; HET: 1PE MES; 1.80A {Aquifex aeolicus} PDB: 2p68_A*

Probab=95.99  E-value=0.06  Score=45.38  Aligned_cols=81  Identities=22%  Similarity=0.310  Sum_probs=49.5

Q ss_pred             CCCEEEEEcC-CHHHHHHHHHHHHHCCCCeEEEEeCChhHHHHH-HH----cCCCE-EEeCCC-CcccHHHHHHHHHHHh
Q 017868          181 PETNVLIMGA-GPIGLVTMLGAPRAFGAPRIVIVDVDDYRLSVA-KE----IGADN-IVKVST-NLQDIAEEVEKIQKAM  252 (365)
Q Consensus       181 ~g~~vlI~G~-g~~G~~ai~~l~~~~g~~~vi~v~~~~~~~~~~-~~----~g~~~-~~~~~~-~~~~~~~~i~~~~~~~  252 (365)
                      .+.++||+|+ |++|.++++.++ ..|+ .|+.+++++++.+.+ ++    .+... .+..+- +.+++.+.++++.+. 
T Consensus         6 ~~~~vlVtGasggiG~~la~~l~-~~G~-~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~D~~~~~~~~~~~~~~~~~-   82 (248)
T 2pnf_A            6 QGKVSLVTGSTRGIGRAIAEKLA-SAGS-TVIITGTSGERAKAVAEEIANKYGVKAHGVEMNLLSEESINKAFEEIYNL-   82 (248)
T ss_dssp             TTCEEEETTCSSHHHHHHHHHHH-HTTC-EEEEEESSHHHHHHHHHHHHHHHCCCEEEEECCTTCHHHHHHHHHHHHHH-
T ss_pred             CCCEEEEECCCchHHHHHHHHHH-HCCC-EEEEEeCChHHHHHHHHHHHhhcCCceEEEEccCCCHHHHHHHHHHHHHh-
Confidence            4678999987 999999999555 5698 577777877665432 22    34322 222222 223333334433332 


Q ss_pred             CCCceEEEeCCC
Q 017868          253 GTGIDVSFDCAG  264 (365)
Q Consensus       253 ~~~~d~vid~~g  264 (365)
                      -+++|++|.++|
T Consensus        83 ~~~~d~vi~~Ag   94 (248)
T 2pnf_A           83 VDGIDILVNNAG   94 (248)
T ss_dssp             SSCCSEEEECCC
T ss_pred             cCCCCEEEECCC
Confidence            357999999887

>4hkt_A Inositol 2-dehydrogenase; structural genomics, nysgrc, PSI-biology, NEW YORK structura genomics research consortium, oxidoreductase; HET: MSE; 2.00A {Sinorhizobium meliloti}

Probab=95.99  E-value=0.054  Score=48.09  Aligned_cols=130  Identities=15%  Similarity=0.160  Sum_probs=79.8

Q ss_pred             EEEEEcCCHHHHHHHHHHHHHCCCCeEEEEeCChhHHH-HHHHcCCCEEEeCCCCcccHHHHHHHHHHHhCCCceEEEeC
Q 017868          184 NVLIMGAGPIGLVTMLGAPRAFGAPRIVIVDVDDYRLS-VAKEIGADNIVKVSTNLQDIAEEVEKIQKAMGTGIDVSFDC  262 (365)
Q Consensus       184 ~vlI~G~g~~G~~ai~~l~~~~g~~~vi~v~~~~~~~~-~~~~~g~~~~~~~~~~~~~~~~~i~~~~~~~~~~~d~vid~  262 (365)
                      +|.|+|+|.+|...+..+.+..+++.+.+.++++++.+ +++++|+.    +    .++.+.+.      ...+|+|+.|
T Consensus         5 ~vgiiG~G~~g~~~~~~l~~~~~~~l~av~d~~~~~~~~~~~~~~~~----~----~~~~~~l~------~~~~D~V~i~   70 (331)
T 4hkt_A            5 RFGLLGAGRIGKVHAKAVSGNADARLVAVADAFPAAAEAIAGAYGCE----V----RTIDAIEA------AADIDAVVIC   70 (331)
T ss_dssp             EEEEECCSHHHHHHHHHHHHCTTEEEEEEECSSHHHHHHHHHHTTCE----E----CCHHHHHH------CTTCCEEEEC
T ss_pred             EEEEECCCHHHHHHHHHHhhCCCcEEEEEECCCHHHHHHHHHHhCCC----c----CCHHHHhc------CCCCCEEEEe
Confidence            68899999999988884554457755556777777755 55677765    2    23333332      3579999999


Q ss_pred             CCCHHHHHHHHHhcccCCEEEEEccCCCCccccchH----hhhcCcEEEee--cccCCcHHHHHHHHHcCCC
Q 017868          263 AGLNKTMSTALGATCAGGKVCLVGMGHHEMTVPLTP----AAVREVDVVGV--FRYKNTWPLCLELLRSGKI  328 (365)
Q Consensus       263 ~g~~~~~~~~~~~l~~~G~~~~~g~~~~~~~~~~~~----~~~~~~~i~~~--~~~~~~~~~~~~~l~~g~~  328 (365)
                      +....+...+..++..+-+ +++.-+..........    .-.+++.+.-.  ..+...++.+.+++++|.+
T Consensus        71 tp~~~h~~~~~~al~~gk~-v~~EKP~~~~~~~~~~l~~~a~~~g~~~~v~~~~r~~p~~~~~~~~i~~g~i  141 (331)
T 4hkt_A           71 TPTDTHADLIERFARAGKA-IFCEKPIDLDAERVRACLKVVSDTKAKLMVGFNRRFDPHFMAVRKAIDDGRI  141 (331)
T ss_dssp             SCGGGHHHHHHHHHHTTCE-EEECSCSCSSHHHHHHHHHHHHHTTCCEEECCGGGGCHHHHHHHHHHHTTTT
T ss_pred             CCchhHHHHHHHHHHcCCc-EEEecCCCCCHHHHHHHHHHHHHcCCeEEEcccccCCHHHHHHHHHHHcCCC
Confidence            9987788888888876544 4443111110111111    12233333322  2236678888999999887

>3ftp_A 3-oxoacyl-[acyl-carrier protein] reductase; ssgcid, 3-ketoacyl-(acyl-carrier- protein) reductase, oxidoreductase, structural genomics; 2.05A {Burkholderia pseudomallei}

Probab=95.98  E-value=0.046  Score=47.05  Aligned_cols=81  Identities=19%  Similarity=0.216  Sum_probs=50.4

Q ss_pred             CCCEEEEEcC-CHHHHHHHHHHHHHCCCCeEEEEeCChhHHHH----HHHcCCC-EEEeCCC-CcccHHHHHHHHHHHhC
Q 017868          181 PETNVLIMGA-GPIGLVTMLGAPRAFGAPRIVIVDVDDYRLSV----AKEIGAD-NIVKVST-NLQDIAEEVEKIQKAMG  253 (365)
Q Consensus       181 ~g~~vlI~G~-g~~G~~ai~~l~~~~g~~~vi~v~~~~~~~~~----~~~~g~~-~~~~~~~-~~~~~~~~i~~~~~~~~  253 (365)
                      .+.++||+|+ +++|.+++..++ ..|+ +|+.+++++++.+.    +++.+.. ..+..+- +.+++...++++.+.. 
T Consensus        27 ~~k~~lVTGas~GIG~aia~~la-~~G~-~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~Dv~d~~~v~~~~~~~~~~~-  103 (270)
T 3ftp_A           27 DKQVAIVTGASRGIGRAIALELA-RRGA-MVIGTATTEAGAEGIGAAFKQAGLEGRGAVLNVNDATAVDALVESTLKEF-  103 (270)
T ss_dssp             TTCEEEETTCSSHHHHHHHHHHH-HTTC-EEEEEESSHHHHHHHHHHHHHHTCCCEEEECCTTCHHHHHHHHHHHHHHH-
T ss_pred             CCCEEEEECCCCHHHHHHHHHHH-HCCC-EEEEEeCCHHHHHHHHHHHHhcCCcEEEEEEeCCCHHHHHHHHHHHHHHc-
Confidence            5678999987 999999999555 5599 67778888766543    2233422 2222222 2233344444443332 


Q ss_pred             CCceEEEeCCC
Q 017868          254 TGIDVSFDCAG  264 (365)
Q Consensus       254 ~~~d~vid~~g  264 (365)
                      +++|++|.++|
T Consensus       104 g~iD~lvnnAg  114 (270)
T 3ftp_A          104 GALNVLVNNAG  114 (270)
T ss_dssp             SCCCEEEECCC
T ss_pred             CCCCEEEECCC
Confidence            47999999987

>4ibo_A Gluconate dehydrogenase; enzyme function initiative structural genomics, oxidoreductase; 2.10A {Agrobacterium fabrum}

Probab=95.96  E-value=0.042  Score=47.31  Aligned_cols=81  Identities=25%  Similarity=0.427  Sum_probs=50.3

Q ss_pred             CCCEEEEEcC-CHHHHHHHHHHHHHCCCCeEEEEeCChhHHHH-H---HHcCCCEE-EeCCC-CcccHHHHHHHHHHHhC
Q 017868          181 PETNVLIMGA-GPIGLVTMLGAPRAFGAPRIVIVDVDDYRLSV-A---KEIGADNI-VKVST-NLQDIAEEVEKIQKAMG  253 (365)
Q Consensus       181 ~g~~vlI~G~-g~~G~~ai~~l~~~~g~~~vi~v~~~~~~~~~-~---~~~g~~~~-~~~~~-~~~~~~~~i~~~~~~~~  253 (365)
                      .|.++||+|+ +++|.++++.++ ..|+ +|+.+++++++.+. +   ++.+.... +..+- +.++..+.++++.+. .
T Consensus        25 ~gk~~lVTGas~gIG~aia~~la-~~G~-~V~~~~r~~~~~~~~~~~l~~~~~~~~~~~~Dv~d~~~v~~~~~~~~~~-~  101 (271)
T 4ibo_A           25 GGRTALVTGSSRGLGRAMAEGLA-VAGA-RILINGTDPSRVAQTVQEFRNVGHDAEAVAFDVTSESEIIEAFARLDEQ-G  101 (271)
T ss_dssp             TTCEEEETTCSSHHHHHHHHHHH-HTTC-EEEECCSCHHHHHHHHHHHHHTTCCEEECCCCTTCHHHHHHHHHHHHHH-T
T ss_pred             CCCEEEEeCCCcHHHHHHHHHHH-HCCC-EEEEEeCCHHHHHHHHHHHHhcCCceEEEEcCCCCHHHHHHHHHHHHHH-C
Confidence            5788999987 999999999555 5699 67777787766543 2   33343322 21121 222333334433332 4


Q ss_pred             CCceEEEeCCC
Q 017868          254 TGIDVSFDCAG  264 (365)
Q Consensus       254 ~~~d~vid~~g  264 (365)
                      +++|+++.++|
T Consensus       102 g~iD~lv~nAg  112 (271)
T 4ibo_A          102 IDVDILVNNAG  112 (271)
T ss_dssp             CCCCEEEECCC
T ss_pred             CCCCEEEECCC
Confidence            57999999988

>1hxh_A 3BETA/17BETA-hydroxysteroid dehydrogenase; alpha-beta, rossmann fold, short-chain dehydrogenase, oxidoreductase; 1.22A {Comamonas testosteroni} SCOP: c.2.1.2

Probab=95.96  E-value=0.042  Score=46.73  Aligned_cols=81  Identities=20%  Similarity=0.297  Sum_probs=50.8

Q ss_pred             CCCEEEEEcC-CHHHHHHHHHHHHHCCCCeEEEEeCChhHHHH-HHHcCCCE-EEeCCC-CcccHHHHHHHHHHHhCCCc
Q 017868          181 PETNVLIMGA-GPIGLVTMLGAPRAFGAPRIVIVDVDDYRLSV-AKEIGADN-IVKVST-NLQDIAEEVEKIQKAMGTGI  256 (365)
Q Consensus       181 ~g~~vlI~G~-g~~G~~ai~~l~~~~g~~~vi~v~~~~~~~~~-~~~~g~~~-~~~~~~-~~~~~~~~i~~~~~~~~~~~  256 (365)
                      .+.++||+|+ |++|.++++.++ ..|+ .|+.+++++++.+. .++++... .+..+- +.+++...+++..+.. +++
T Consensus         5 ~~k~vlVTGas~giG~~ia~~l~-~~G~-~V~~~~r~~~~~~~~~~~~~~~~~~~~~D~~~~~~v~~~~~~~~~~~-g~i   81 (253)
T 1hxh_A            5 QGKVALVTGGASGVGLEVVKLLL-GEGA-KVAFSDINEAAGQQLAAELGERSMFVRHDVSSEADWTLVMAAVQRRL-GTL   81 (253)
T ss_dssp             TTCEEEETTTTSHHHHHHHHHHH-HTTC-EEEEECSCHHHHHHHHHHHCTTEEEECCCTTCHHHHHHHHHHHHHHH-CSC
T ss_pred             CCCEEEEeCCCcHHHHHHHHHHH-HCCC-EEEEEeCCHHHHHHHHHHcCCceEEEEccCCCHHHHHHHHHHHHHHc-CCC
Confidence            4678999987 999999999555 5598 57778888776543 34555332 222222 2223333344433322 479


Q ss_pred             eEEEeCCC
Q 017868          257 DVSFDCAG  264 (365)
Q Consensus       257 d~vid~~g  264 (365)
                      |++|.++|
T Consensus        82 d~lv~~Ag   89 (253)
T 1hxh_A           82 NVLVNNAG   89 (253)
T ss_dssp             CEEEECCC
T ss_pred             CEEEECCC
Confidence            99999887

>1nff_A Putative oxidoreductase RV2002; directed evolution, GFP, SDR, hydroxysteroid dehydrogenase, structural genomics, PSI; HET: NAD; 1.80A {Mycobacterium tuberculosis} SCOP: c.2.1.2 PDB: 1nfq_A* 1nfr_A*

Probab=95.96  E-value=0.056  Score=46.19  Aligned_cols=81  Identities=22%  Similarity=0.275  Sum_probs=50.4

Q ss_pred             CCCEEEEEcC-CHHHHHHHHHHHHHCCCCeEEEEeCChhHHHH-HHHcCCC-EEEeCCC-CcccHHHHHHHHHHHhCCCc
Q 017868          181 PETNVLIMGA-GPIGLVTMLGAPRAFGAPRIVIVDVDDYRLSV-AKEIGAD-NIVKVST-NLQDIAEEVEKIQKAMGTGI  256 (365)
Q Consensus       181 ~g~~vlI~G~-g~~G~~ai~~l~~~~g~~~vi~v~~~~~~~~~-~~~~g~~-~~~~~~~-~~~~~~~~i~~~~~~~~~~~  256 (365)
                      .+.++||+|+ |++|.++++.++ ..|+ .|+.+++++++.+. .+++... ..+..+- +.+++.+.+++..+.. +++
T Consensus         6 ~~k~vlVTGas~gIG~~ia~~l~-~~G~-~V~~~~r~~~~~~~~~~~~~~~~~~~~~D~~~~~~v~~~~~~~~~~~-g~i   82 (260)
T 1nff_A            6 TGKVALVSGGARGMGASHVRAMV-AEGA-KVVFGDILDEEGKAMAAELADAARYVHLDVTQPAQWKAAVDTAVTAF-GGL   82 (260)
T ss_dssp             TTCEEEEETTTSHHHHHHHHHHH-HTTC-EEEEEESCHHHHHHHHHHTGGGEEEEECCTTCHHHHHHHHHHHHHHH-SCC
T ss_pred             CCCEEEEeCCCCHHHHHHHHHHH-HCCC-EEEEEeCCHHHHHHHHHHhhcCceEEEecCCCHHHHHHHHHHHHHHc-CCC
Confidence            4678999987 999999999554 5698 57777787766543 3444321 1222222 2233334444443322 479


Q ss_pred             eEEEeCCC
Q 017868          257 DVSFDCAG  264 (365)
Q Consensus       257 d~vid~~g  264 (365)
                      |++|.++|
T Consensus        83 D~lv~~Ag   90 (260)
T 1nff_A           83 HVLVNNAG   90 (260)
T ss_dssp             CEEEECCC
T ss_pred             CEEEECCC
Confidence            99999887

>3l77_A Short-chain alcohol dehydrogenase; oxidoreductase; HET: NJP PG4; 1.60A {Thermococcus sibiricus} SCOP: c.2.1.0 PDB: 3tn7_A*

Probab=95.96  E-value=0.041  Score=46.13  Aligned_cols=80  Identities=20%  Similarity=0.207  Sum_probs=48.2

Q ss_pred             CCEEEEEcC-CHHHHHHHHHHHHHCCCCeEEEEeCChhHHHHH-H----HcCCCE-EEeCCC-CcccHHHHHHHHHHHhC
Q 017868          182 ETNVLIMGA-GPIGLVTMLGAPRAFGAPRIVIVDVDDYRLSVA-K----EIGADN-IVKVST-NLQDIAEEVEKIQKAMG  253 (365)
Q Consensus       182 g~~vlI~G~-g~~G~~ai~~l~~~~g~~~vi~v~~~~~~~~~~-~----~~g~~~-~~~~~~-~~~~~~~~i~~~~~~~~  253 (365)
                      +.++||+|+ +++|.++++.++ ..|+ .|+.++++.++.+.+ +    ..+... .+..+- +.++..+.++++.+.. 
T Consensus         2 ~k~vlITGas~gIG~~ia~~l~-~~G~-~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~D~~~~~~v~~~~~~~~~~~-   78 (235)
T 3l77_A            2 MKVAVITGASRGIGEAIARALA-RDGY-ALALGARSVDRLEKIAHELMQEQGVEVFYHHLDVSKAESVEEFSKKVLERF-   78 (235)
T ss_dssp             CCEEEEESCSSHHHHHHHHHHH-HTTC-EEEEEESCHHHHHHHHHHHHHHHCCCEEEEECCTTCHHHHHHHCC-HHHHH-
T ss_pred             CCEEEEECCCcHHHHHHHHHHH-HCCC-EEEEEeCCHHHHHHHHHHHHhhcCCeEEEEEeccCCHHHHHHHHHHHHHhc-
Confidence            578999987 999999999554 5699 577777887765432 2    334332 222222 2223333333333322 


Q ss_pred             CCceEEEeCCC
Q 017868          254 TGIDVSFDCAG  264 (365)
Q Consensus       254 ~~~d~vid~~g  264 (365)
                      +++|++|.++|
T Consensus        79 g~id~li~~Ag   89 (235)
T 3l77_A           79 GDVDVVVANAG   89 (235)
T ss_dssp             SSCSEEEECCC
T ss_pred             CCCCEEEECCc
Confidence            47999999887

>1zk4_A R-specific alcohol dehydrogenase; short chain reductases/dehydrogenases, magnesium dependence, oxidoreductase; HET: NAP; 1.00A {Lactobacillus brevis} SCOP: c.2.1.2 PDB: 1nxq_A* 1zjy_A* 1zjz_A* 1zk0_A* 1zk1_A* 1zk2_A 1zk3_A

Probab=95.96  E-value=0.045  Score=46.30  Aligned_cols=81  Identities=19%  Similarity=0.162  Sum_probs=49.4

Q ss_pred             CCCEEEEEcC-CHHHHHHHHHHHHHCCCCeEEEEeCChhHHHH-HHHcC---CCEEEeCCCC-cccHHHHHHHHHHHhCC
Q 017868          181 PETNVLIMGA-GPIGLVTMLGAPRAFGAPRIVIVDVDDYRLSV-AKEIG---ADNIVKVSTN-LQDIAEEVEKIQKAMGT  254 (365)
Q Consensus       181 ~g~~vlI~G~-g~~G~~ai~~l~~~~g~~~vi~v~~~~~~~~~-~~~~g---~~~~~~~~~~-~~~~~~~i~~~~~~~~~  254 (365)
                      ++.++||+|+ |++|.++++.++ ..|+ .|+.+++++++.+. .+++.   -...+..+-. .+++.+.+.++.+. -+
T Consensus         5 ~~k~vlVtGasggiG~~~a~~l~-~~G~-~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~D~~~~~~~~~~~~~~~~~-~~   81 (251)
T 1zk4_A            5 DGKVAIITGGTLGIGLAIATKFV-EEGA-KVMITGRHSDVGEKAAKSVGTPDQIQFFQHDSSDEDGWTKLFDATEKA-FG   81 (251)
T ss_dssp             TTCEEEETTTTSHHHHHHHHHHH-HTTC-EEEEEESCHHHHHHHHHHHCCTTTEEEEECCTTCHHHHHHHHHHHHHH-HS
T ss_pred             CCcEEEEeCCCChHHHHHHHHHH-HCCC-EEEEEeCCHHHHHHHHHHhhccCceEEEECCCCCHHHHHHHHHHHHHH-hC
Confidence            4678999987 999999999554 5698 57777787766543 34333   1122222222 22333333333332 24


Q ss_pred             CceEEEeCCC
Q 017868          255 GIDVSFDCAG  264 (365)
Q Consensus       255 ~~d~vid~~g  264 (365)
                      ++|++|.++|
T Consensus        82 ~id~li~~Ag   91 (251)
T 1zk4_A           82 PVSTLVNNAG   91 (251)
T ss_dssp             SCCEEEECCC
T ss_pred             CCCEEEECCC
Confidence            7999999887

>1zem_A Xylitol dehydrogenase; rossmann fold, dinucleotide-binding domain, oxidoreductase; HET: NAD; 1.90A {Gluconobacter oxydans} SCOP: c.2.1.2

Probab=95.95  E-value=0.062  Score=45.89  Aligned_cols=81  Identities=26%  Similarity=0.407  Sum_probs=49.4

Q ss_pred             CCCEEEEEcC-CHHHHHHHHHHHHHCCCCeEEEEeCChhHHHHH-HHc---CCCE-EEeCCC-CcccHHHHHHHHHHHhC
Q 017868          181 PETNVLIMGA-GPIGLVTMLGAPRAFGAPRIVIVDVDDYRLSVA-KEI---GADN-IVKVST-NLQDIAEEVEKIQKAMG  253 (365)
Q Consensus       181 ~g~~vlI~G~-g~~G~~ai~~l~~~~g~~~vi~v~~~~~~~~~~-~~~---g~~~-~~~~~~-~~~~~~~~i~~~~~~~~  253 (365)
                      .+.++||+|+ |++|.++++.++ ..|+ .|+.+++++++.+.+ +++   +... .+..+- +.+++...+.++.+.. 
T Consensus         6 ~~k~vlVTGas~gIG~~ia~~l~-~~G~-~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~D~~~~~~~~~~~~~~~~~~-   82 (262)
T 1zem_A            6 NGKVCLVTGAGGNIGLATALRLA-EEGT-AIALLDMNREALEKAEASVREKGVEARSYVCDVTSEEAVIGTVDSVVRDF-   82 (262)
T ss_dssp             TTCEEEEETTTSHHHHHHHHHHH-HTTC-EEEEEESCHHHHHHHHHHHHTTTSCEEEEECCTTCHHHHHHHHHHHHHHH-
T ss_pred             CCCEEEEeCCCcHHHHHHHHHHH-HCCC-EEEEEeCCHHHHHHHHHHHHhcCCcEEEEEecCCCHHHHHHHHHHHHHHh-
Confidence            4678999987 999999999554 5698 577777877665432 322   4322 222222 2233333344333322 


Q ss_pred             CCceEEEeCCC
Q 017868          254 TGIDVSFDCAG  264 (365)
Q Consensus       254 ~~~d~vid~~g  264 (365)
                      +++|++|.++|
T Consensus        83 g~id~lv~nAg   93 (262)
T 1zem_A           83 GKIDFLFNNAG   93 (262)
T ss_dssp             SCCCEEEECCC
T ss_pred             CCCCEEEECCC
Confidence            47999999887

>1sby_A Alcohol dehydrogenase; ternary complex, NAD, trifluoroethanol, oxidoreductase; HET: NAD; 1.10A {Scaptodrosophila lebanonensis} SCOP: c.2.1.2 PDB: 1b14_A* 1b15_A* 1a4u_A* 1b2l_A* 1b16_A* 3rj5_A* 3rj9_A* 1mg5_A*

Probab=95.95  E-value=0.053  Score=46.04  Aligned_cols=82  Identities=22%  Similarity=0.271  Sum_probs=48.5

Q ss_pred             CCCEEEEEcC-CHHHHHHHHHHHHHCCCCeEEEEeCCh--hHHHHHHH-c-CCC-EEEeCCCCc--ccHHHHHHHHHHHh
Q 017868          181 PETNVLIMGA-GPIGLVTMLGAPRAFGAPRIVIVDVDD--YRLSVAKE-I-GAD-NIVKVSTNL--QDIAEEVEKIQKAM  252 (365)
Q Consensus       181 ~g~~vlI~G~-g~~G~~ai~~l~~~~g~~~vi~v~~~~--~~~~~~~~-~-g~~-~~~~~~~~~--~~~~~~i~~~~~~~  252 (365)
                      .+.++||+|+ |++|.++++.++ ..|+++|+.+++++  +..+.+.+ . +.. ..+..+-.+  ++..+.++++.+..
T Consensus         4 ~~k~vlVtGas~gIG~~~a~~l~-~~G~~~v~~~~r~~~~~~~~~l~~~~~~~~~~~~~~D~~~~~~~~~~~~~~~~~~~   82 (254)
T 1sby_A            4 TNKNVIFVAALGGIGLDTSRELV-KRNLKNFVILDRVENPTALAELKAINPKVNITFHTYDVTVPVAESKKLLKKIFDQL   82 (254)
T ss_dssp             TTCEEEEETTTSHHHHHHHHHHH-HTCCSEEEEEESSCCHHHHHHHHHHCTTSEEEEEECCTTSCHHHHHHHHHHHHHHH
T ss_pred             CCcEEEEECCCChHHHHHHHHHH-HCCCcEEEEEecCchHHHHHHHHHhCCCceEEEEEEecCCChHHHHHHHHHHHHhc
Confidence            4678999987 999999999554 56986466666654  33333333 2 211 122222222  23444444443322


Q ss_pred             CCCceEEEeCCC
Q 017868          253 GTGIDVSFDCAG  264 (365)
Q Consensus       253 ~~~~d~vid~~g  264 (365)
                       +++|++|.++|
T Consensus        83 -g~id~lv~~Ag   93 (254)
T 1sby_A           83 -KTVDILINGAG   93 (254)
T ss_dssp             -SCCCEEEECCC
T ss_pred             -CCCCEEEECCc
Confidence             47999999987

>2ehd_A Oxidoreductase, oxidoreductase, short-chain dehydrogenase/reducta; rossman fold, structural genomics, NPPSFA; 2.40A {Thermus thermophilus}

Probab=95.93  E-value=0.039  Score=46.15  Aligned_cols=80  Identities=28%  Similarity=0.278  Sum_probs=50.0

Q ss_pred             CCEEEEEcC-CHHHHHHHHHHHHHCCCCeEEEEeCChhHHHH-HHHcCCCEEEeCCCC-cccHHHHHHHHHHHhCCCceE
Q 017868          182 ETNVLIMGA-GPIGLVTMLGAPRAFGAPRIVIVDVDDYRLSV-AKEIGADNIVKVSTN-LQDIAEEVEKIQKAMGTGIDV  258 (365)
Q Consensus       182 g~~vlI~G~-g~~G~~ai~~l~~~~g~~~vi~v~~~~~~~~~-~~~~g~~~~~~~~~~-~~~~~~~i~~~~~~~~~~~d~  258 (365)
                      +.++||+|+ |++|.++++.++ ..|+ .|+.+++++++.+. .++++-...+..+-. .+++.+.++++.+.. +++|+
T Consensus         5 ~k~vlVtGasggiG~~~a~~l~-~~G~-~V~~~~r~~~~~~~~~~~~~~~~~~~~D~~~~~~~~~~~~~~~~~~-~~id~   81 (234)
T 2ehd_A            5 KGAVLITGASRGIGEATARLLH-AKGY-RVGLMARDEKRLQALAAELEGALPLPGDVREEGDWARAVAAMEEAF-GELSA   81 (234)
T ss_dssp             CCEEEESSTTSHHHHHHHHHHH-HTTC-EEEEEESCHHHHHHHHHHSTTCEEEECCTTCHHHHHHHHHHHHHHH-SCCCE
T ss_pred             CCEEEEECCCcHHHHHHHHHHH-HCCC-EEEEEECCHHHHHHHHHHhhhceEEEecCCCHHHHHHHHHHHHHHc-CCCCE
Confidence            568999987 999999999554 5698 57777787776553 344542233332222 233333344333322 47999


Q ss_pred             EEeCCC
Q 017868          259 SFDCAG  264 (365)
Q Consensus       259 vid~~g  264 (365)
                      +|.++|
T Consensus        82 li~~Ag   87 (234)
T 2ehd_A           82 LVNNAG   87 (234)
T ss_dssp             EEECCC
T ss_pred             EEECCC
Confidence            999887

>3rc1_A Sugar 3-ketoreductase; sugar biosynthesis, TDP binding, NADP binding binding protein; HET: TLO NAP; 1.71A {Actinomadura kijaniata} PDB: 3rbv_A* 3rc2_A* 3rcb_A* 3rc7_A* 3rc9_A*

Probab=95.92  E-value=0.059  Score=48.33  Aligned_cols=132  Identities=14%  Similarity=0.066  Sum_probs=80.4

Q ss_pred             CEEEEEcCCHHHH-HHHHHHHHHCCCCeEEEEeCChhHHH-HHHHcCCCEEEeCCCCcccHHHHHHHHHHHhCCCceEEE
Q 017868          183 TNVLIMGAGPIGL-VTMLGAPRAFGAPRIVIVDVDDYRLS-VAKEIGADNIVKVSTNLQDIAEEVEKIQKAMGTGIDVSF  260 (365)
Q Consensus       183 ~~vlI~G~g~~G~-~ai~~l~~~~g~~~vi~v~~~~~~~~-~~~~~g~~~~~~~~~~~~~~~~~i~~~~~~~~~~~d~vi  260 (365)
                      -+|.|+|+|.+|. ..+..+.+.-+++.+.++++++++.+ +++++|+...       .++.+.+.      ...+|+|+
T Consensus        28 ~rigiIG~G~~g~~~~~~~l~~~~~~~l~av~d~~~~~~~~~a~~~g~~~~-------~~~~~ll~------~~~~D~V~   94 (350)
T 3rc1_A           28 IRVGVIGCADIAWRRALPALEAEPLTEVTAIASRRWDRAKRFTERFGGEPV-------EGYPALLE------RDDVDAVY   94 (350)
T ss_dssp             EEEEEESCCHHHHHTHHHHHHHCTTEEEEEEEESSHHHHHHHHHHHCSEEE-------ESHHHHHT------CTTCSEEE
T ss_pred             eEEEEEcCcHHHHHHHHHHHHhCCCeEEEEEEcCCHHHHHHHHHHcCCCCc-------CCHHHHhc------CCCCCEEE
Confidence            4789999999998 56663544447755556677777655 5577887543       23333321      35799999


Q ss_pred             eCCCCHHHHHHHHHhcccCCEEEEEccCCCCccccchH----hhhcCcEEE-ee-cccCCcHHHHHHHHHcCCC
Q 017868          261 DCAGLNKTMSTALGATCAGGKVCLVGMGHHEMTVPLTP----AAVREVDVV-GV-FRYKNTWPLCLELLRSGKI  328 (365)
Q Consensus       261 d~~g~~~~~~~~~~~l~~~G~~~~~g~~~~~~~~~~~~----~~~~~~~i~-~~-~~~~~~~~~~~~~l~~g~~  328 (365)
                      .|+....+...+..++..+-+ +++.=+..........    .-.+++.+. +. ..+...++.+.+++++|.+
T Consensus        95 i~tp~~~h~~~~~~al~aGk~-Vl~EKP~a~~~~ea~~l~~~a~~~g~~~~v~~~~R~~p~~~~~k~~i~~G~i  167 (350)
T 3rc1_A           95 VPLPAVLHAEWIDRALRAGKH-VLAEKPLTTDRPQAERLFAVARERGLLLMENFMFLHHPQHRQVADMLDEGVI  167 (350)
T ss_dssp             ECCCGGGHHHHHHHHHHTTCE-EEEESSSCSSHHHHHHHHHHHHHTTCCEEEECGGGGCTHHHHHHHHHHTTTT
T ss_pred             ECCCcHHHHHHHHHHHHCCCc-EEEeCCCCCCHHHHHHHHHHHHHhCCEEEEEecccCCHHHHHHHHHHhcCCC
Confidence            999988788888888876544 4442111100001111    122333332 22 2346778899999999887

>2o23_A HADH2 protein; HSD17B10, schad, ERAB, type II HADH, 2-methyl-3-hydroxybuTyr dehydrogenase, MHBD, structural genomics, structural genomi consortium; HET: NAD GOL; 1.20A {Homo sapiens} SCOP: c.2.1.2 PDB: 1so8_A 1u7t_A* 1e3s_A* 1e3w_B* 1e3w_A* 1e6w_A*

Probab=95.92  E-value=0.05  Score=46.43  Aligned_cols=81  Identities=22%  Similarity=0.354  Sum_probs=50.0

Q ss_pred             CCCEEEEEcC-CHHHHHHHHHHHHHCCCCeEEEEeCChhHHH-HHHHcCCCE-EEeCCCC-cccHHHHHHHHHHHhCCCc
Q 017868          181 PETNVLIMGA-GPIGLVTMLGAPRAFGAPRIVIVDVDDYRLS-VAKEIGADN-IVKVSTN-LQDIAEEVEKIQKAMGTGI  256 (365)
Q Consensus       181 ~g~~vlI~G~-g~~G~~ai~~l~~~~g~~~vi~v~~~~~~~~-~~~~~g~~~-~~~~~~~-~~~~~~~i~~~~~~~~~~~  256 (365)
                      .+.++||+|+ |++|.++++.++ ..|+ .|++++++.++.+ ..++++... .+..+-. .+++.+.++++.+.. +++
T Consensus        11 ~~k~vlVTGasggiG~~~a~~l~-~~G~-~V~~~~r~~~~~~~~~~~~~~~~~~~~~D~~~~~~v~~~~~~~~~~~-g~i   87 (265)
T 2o23_A           11 KGLVAVITGGASGLGLATAERLV-GQGA-SAVLLDLPNSGGEAQAKKLGNNCVFAPADVTSEKDVQTALALAKGKF-GRV   87 (265)
T ss_dssp             TTCEEEEETTTSHHHHHHHHHHH-HTTC-EEEEEECTTSSHHHHHHHHCTTEEEEECCTTCHHHHHHHHHHHHHHH-SCC
T ss_pred             CCCEEEEECCCChHHHHHHHHHH-HCCC-EEEEEeCCcHhHHHHHHHhCCceEEEEcCCCCHHHHHHHHHHHHHHC-CCC
Confidence            4678999987 999999999554 5598 5677777665543 445555432 2222222 233333444333322 479


Q ss_pred             eEEEeCCC
Q 017868          257 DVSFDCAG  264 (365)
Q Consensus       257 d~vid~~g  264 (365)
                      |++|.++|
T Consensus        88 d~li~~Ag   95 (265)
T 2o23_A           88 DVAVNCAG   95 (265)
T ss_dssp             CEEEECCC
T ss_pred             CEEEECCc
Confidence            99999887

>3pwz_A Shikimate dehydrogenase 3; alpha-beta, oxidoreductase; 1.71A {Pseudomonas putida}

Probab=95.91  E-value=0.036  Score=47.73  Aligned_cols=108  Identities=18%  Similarity=0.192  Sum_probs=65.1

Q ss_pred             CCCEEEEEcCCHHHHHHHHHHHHHCCCCeEEEEeCChhHHH-HHHHcCC--CEEEeCCCCcccHHHHHHHHHHHhCCCce
Q 017868          181 PETNVLIMGAGPIGLVTMLGAPRAFGAPRIVIVDVDDYRLS-VAKEIGA--DNIVKVSTNLQDIAEEVEKIQKAMGTGID  257 (365)
Q Consensus       181 ~g~~vlI~G~g~~G~~ai~~l~~~~g~~~vi~v~~~~~~~~-~~~~~g~--~~~~~~~~~~~~~~~~i~~~~~~~~~~~d  257 (365)
                      .+.++||+|+|++|.+++. .+...|+..+.++.++.++.+ ++++++.  .....+    +++          ....+|
T Consensus       119 ~~k~~lvlGaGg~~~aia~-~L~~~G~~~v~i~~R~~~~a~~la~~~~~~~~~~~~~----~~l----------~~~~~D  183 (272)
T 3pwz_A          119 RNRRVLLLGAGGAVRGALL-PFLQAGPSELVIANRDMAKALALRNELDHSRLRISRY----EAL----------EGQSFD  183 (272)
T ss_dssp             TTSEEEEECCSHHHHHHHH-HHHHTCCSEEEEECSCHHHHHHHHHHHCCTTEEEECS----GGG----------TTCCCS
T ss_pred             cCCEEEEECccHHHHHHHH-HHHHcCCCEEEEEeCCHHHHHHHHHHhccCCeeEeeH----HHh----------cccCCC
Confidence            6789999999999999998 555679878888888888765 5566664  122221    111          015799


Q ss_pred             EEEeCCCCHHHHH---HHHHhcccCCEEEEEccCCCCccccchHhhhcCc
Q 017868          258 VSFDCAGLNKTMS---TALGATCAGGKVCLVGMGHHEMTVPLTPAAVREV  304 (365)
Q Consensus       258 ~vid~~g~~~~~~---~~~~~l~~~G~~~~~g~~~~~~~~~~~~~~~~~~  304 (365)
                      +||+++.....-.   .....+.++..++.+-.... .+......-.++.
T Consensus       184 ivInaTp~gm~~~~~~i~~~~l~~~~~V~DlvY~P~-~T~ll~~A~~~G~  232 (272)
T 3pwz_A          184 IVVNATSASLTADLPPLPADVLGEAALAYELAYGKG-LTPFLRLAREQGQ  232 (272)
T ss_dssp             EEEECSSGGGGTCCCCCCGGGGTTCSEEEESSCSCC-SCHHHHHHHHHSC
T ss_pred             EEEECCCCCCCCCCCCCCHHHhCcCCEEEEeecCCC-CCHHHHHHHHCCC
Confidence            9999987431100   12245666666665543322 2333333444443

>3awd_A GOX2181, putative polyol dehydrogenase; oxidoreductase; 1.80A {Gluconobacter oxydans}

Probab=95.90  E-value=0.077  Score=45.07  Aligned_cols=81  Identities=22%  Similarity=0.415  Sum_probs=49.0

Q ss_pred             CCCEEEEEcC-CHHHHHHHHHHHHHCCCCeEEEEeCChhHHHH----HHHcCCCE-EEeCCCC-cccHHHHHHHHHHHhC
Q 017868          181 PETNVLIMGA-GPIGLVTMLGAPRAFGAPRIVIVDVDDYRLSV----AKEIGADN-IVKVSTN-LQDIAEEVEKIQKAMG  253 (365)
Q Consensus       181 ~g~~vlI~G~-g~~G~~ai~~l~~~~g~~~vi~v~~~~~~~~~----~~~~g~~~-~~~~~~~-~~~~~~~i~~~~~~~~  253 (365)
                      .+.++||+|+ |++|.++++.++ ..|+ .|+++++++++.+.    +++.+... .+..+-. .+++.+.++++.+. .
T Consensus        12 ~~k~vlItGasggiG~~la~~l~-~~G~-~V~~~~r~~~~~~~~~~~l~~~~~~~~~~~~D~~~~~~~~~~~~~~~~~-~   88 (260)
T 3awd_A           12 DNRVAIVTGGAQNIGLACVTALA-EAGA-RVIIADLDEAMATKAVEDLRMEGHDVSSVVMDVTNTESVQNAVRSVHEQ-E   88 (260)
T ss_dssp             TTCEEEEETTTSHHHHHHHHHHH-HTTC-EEEEEESCHHHHHHHHHHHHHTTCCEEEEECCTTCHHHHHHHHHHHHHH-H
T ss_pred             CCCEEEEeCCCchHHHHHHHHHH-HCCC-EEEEEeCCHHHHHHHHHHHHhcCCceEEEEecCCCHHHHHHHHHHHHHH-c
Confidence            4678999987 999999999554 5598 57777787765432    22334322 2222222 22333333333322 2


Q ss_pred             CCceEEEeCCC
Q 017868          254 TGIDVSFDCAG  264 (365)
Q Consensus       254 ~~~d~vid~~g  264 (365)
                      +++|++|.++|
T Consensus        89 ~~id~vi~~Ag   99 (260)
T 3awd_A           89 GRVDILVACAG   99 (260)
T ss_dssp             SCCCEEEECCC
T ss_pred             CCCCEEEECCC
Confidence            47999999887

>3ujc_A Phosphoethanolamine N-methyltransferase; parasite; HET: PC; 1.19A {Plasmodium falciparum} PDB: 3uj9_A* 3uj6_A* 3uj7_A* 3uj8_A* 3uja_A 3ujb_A* 4fgz_A* 3ujd_A*

Probab=95.90  E-value=0.041  Score=46.85  Aligned_cols=101  Identities=15%  Similarity=0.163  Sum_probs=68.5

Q ss_pred             HHhcCCCCCCEEEEEcCCHHHHHHHHHHHHHCCCCeEEEEeCChhHHHHHHHcCCC----EEEeCCCCcccHHHHHHHHH
Q 017868          174 CRRANIGPETNVLIMGAGPIGLVTMLGAPRAFGAPRIVIVDVDDYRLSVAKEIGAD----NIVKVSTNLQDIAEEVEKIQ  249 (365)
Q Consensus       174 ~~~~~~~~g~~vlI~G~g~~G~~ai~~l~~~~g~~~vi~v~~~~~~~~~~~~~g~~----~~~~~~~~~~~~~~~i~~~~  249 (365)
                      ++...++++.+||-.|+| .|..+.. +++..+. .+++++.+++..+.+++....    ..+..+.  .++        
T Consensus        48 ~~~~~~~~~~~vLdiG~G-~G~~~~~-l~~~~~~-~v~~vD~s~~~~~~a~~~~~~~~~~~~~~~d~--~~~--------  114 (266)
T 3ujc_A           48 LSDIELNENSKVLDIGSG-LGGGCMY-INEKYGA-HTHGIDICSNIVNMANERVSGNNKIIFEANDI--LTK--------  114 (266)
T ss_dssp             TTTCCCCTTCEEEEETCT-TSHHHHH-HHHHHCC-EEEEEESCHHHHHHHHHTCCSCTTEEEEECCT--TTC--------
T ss_pred             HHhcCCCCCCEEEEECCC-CCHHHHH-HHHHcCC-EEEEEeCCHHHHHHHHHHhhcCCCeEEEECcc--ccC--------
Confidence            355677899999999986 4777777 6665576 799999999999988876432    1222111  111        


Q ss_pred             HHhCCCceEEEeCCC--------CHHHHHHHHHhcccCCEEEEEcc
Q 017868          250 KAMGTGIDVSFDCAG--------LNKTMSTALGATCAGGKVCLVGM  287 (365)
Q Consensus       250 ~~~~~~~d~vid~~g--------~~~~~~~~~~~l~~~G~~~~~g~  287 (365)
                      ......+|+|+....        ....+..+.++|+++|.+++...
T Consensus       115 ~~~~~~fD~v~~~~~l~~~~~~~~~~~l~~~~~~L~pgG~l~~~~~  160 (266)
T 3ujc_A          115 EFPENNFDLIYSRDAILALSLENKNKLFQKCYKWLKPTGTLLITDY  160 (266)
T ss_dssp             CCCTTCEEEEEEESCGGGSCHHHHHHHHHHHHHHEEEEEEEEEEEE
T ss_pred             CCCCCcEEEEeHHHHHHhcChHHHHHHHHHHHHHcCCCCEEEEEEe
Confidence            001468999997532        12345678889999999988753

>1kpg_A CFA synthase;, cyclopropane-fatty-acyl-phospholipid synthase 1; mixed alpha beta fold, structural genomics, PSI; HET: SAH 16A; 2.00A {Mycobacterium tuberculosis} SCOP: c.66.1.18 PDB: 1kp9_A* 1kph_A* 1tpy_A* 1l1e_A*

Probab=95.90  E-value=0.06  Score=46.61  Aligned_cols=98  Identities=15%  Similarity=0.170  Sum_probs=66.1

Q ss_pred             HhcCCCCCCEEEEEcCCHHHHHHHHHHHHHCCCCeEEEEeCChhHHHHHHHc----CCC-EEEeCCCCcccHHHHHHHHH
Q 017868          175 RRANIGPETNVLIMGAGPIGLVTMLGAPRAFGAPRIVIVDVDDYRLSVAKEI----GAD-NIVKVSTNLQDIAEEVEKIQ  249 (365)
Q Consensus       175 ~~~~~~~g~~vlI~G~g~~G~~ai~~l~~~~g~~~vi~v~~~~~~~~~~~~~----g~~-~~~~~~~~~~~~~~~i~~~~  249 (365)
                      +...++++.+||-.|+|. |..+.. +++..|. .+++++.+++..+.+++.    +.. .+.....+..+       + 
T Consensus        58 ~~~~~~~~~~vLDiGcG~-G~~~~~-l~~~~~~-~v~gvd~s~~~~~~a~~~~~~~~~~~~~~~~~~d~~~-------~-  126 (287)
T 1kpg_A           58 GKLGLQPGMTLLDVGCGW-GATMMR-AVEKYDV-NVVGLTLSKNQANHVQQLVANSENLRSKRVLLAGWEQ-------F-  126 (287)
T ss_dssp             TTTTCCTTCEEEEETCTT-SHHHHH-HHHHHCC-EEEEEESCHHHHHHHHHHHHTCCCCSCEEEEESCGGG-------C-
T ss_pred             HHcCCCCcCEEEEECCcc-cHHHHH-HHHHcCC-EEEEEECCHHHHHHHHHHHHhcCCCCCeEEEECChhh-------C-
Confidence            456678999999999865 777777 6656688 899999999887776553    321 11111111111       1 


Q ss_pred             HHhCCCceEEEeC-----CC---CHHHHHHHHHhcccCCEEEEEc
Q 017868          250 KAMGTGIDVSFDC-----AG---LNKTMSTALGATCAGGKVCLVG  286 (365)
Q Consensus       250 ~~~~~~~d~vid~-----~g---~~~~~~~~~~~l~~~G~~~~~g  286 (365)
                         ...+|+|+..     .+   ....+..+.++|+++|.+++..
T Consensus       127 ---~~~fD~v~~~~~l~~~~~~~~~~~l~~~~~~LkpgG~l~~~~  168 (287)
T 1kpg_A          127 ---DEPVDRIVSIGAFEHFGHERYDAFFSLAHRLLPADGVMLLHT  168 (287)
T ss_dssp             ---CCCCSEEEEESCGGGTCTTTHHHHHHHHHHHSCTTCEEEEEE
T ss_pred             ---CCCeeEEEEeCchhhcChHHHHHHHHHHHHhcCCCCEEEEEE
Confidence               2679999864     22   2356778889999999998764

>2egg_A AROE, shikimate 5-dehydrogenase; dimer, X-RAY diffraction, structural genomics, NPPSFA; 2.25A {Geobacillus kaustophilus}

Probab=95.89  E-value=0.014  Score=51.20  Aligned_cols=94  Identities=16%  Similarity=0.123  Sum_probs=61.1

Q ss_pred             CCCEEEEEcCCHHHHHHHHHHHHHCCCCeEEEEeCChhHH-HHHHHcCCC--EEEeCCCCcccHHHHHHHHHHHhCCCce
Q 017868          181 PETNVLIMGAGPIGLVTMLGAPRAFGAPRIVIVDVDDYRL-SVAKEIGAD--NIVKVSTNLQDIAEEVEKIQKAMGTGID  257 (365)
Q Consensus       181 ~g~~vlI~G~g~~G~~ai~~l~~~~g~~~vi~v~~~~~~~-~~~~~~g~~--~~~~~~~~~~~~~~~i~~~~~~~~~~~d  257 (365)
                      .+.+++|+|+|++|.+++. .+...|+..|.+++++.++. +++++++..  .+.       ++. .+.+.    -..+|
T Consensus       140 ~~~~vlVlGaGg~g~aia~-~L~~~G~~~V~v~nR~~~ka~~la~~~~~~~~~~~-------~~~-~~~~~----~~~aD  206 (297)
T 2egg_A          140 DGKRILVIGAGGGARGIYF-SLLSTAAERIDMANRTVEKAERLVREGDERRSAYF-------SLA-EAETR----LAEYD  206 (297)
T ss_dssp             TTCEEEEECCSHHHHHHHH-HHHTTTCSEEEEECSSHHHHHHHHHHSCSSSCCEE-------CHH-HHHHT----GGGCS
T ss_pred             CCCEEEEECcHHHHHHHHH-HHHHCCCCEEEEEeCCHHHHHHHHHHhhhccCcee-------eHH-HHHhh----hccCC
Confidence            6789999999999999999 55677987788888888775 466777652  111       121 22221    25799


Q ss_pred             EEEeCCCCHHHH-----HHHHHhcccCCEEEEEcc
Q 017868          258 VSFDCAGLNKTM-----STALGATCAGGKVCLVGM  287 (365)
Q Consensus       258 ~vid~~g~~~~~-----~~~~~~l~~~G~~~~~g~  287 (365)
                      +||+|++.....     ......+.++..++.+..
T Consensus       207 ivIn~t~~~~~~~~~~~~i~~~~l~~~~~v~D~~y  241 (297)
T 2egg_A          207 IIINTTSVGMHPRVEVQPLSLERLRPGVIVSDIIY  241 (297)
T ss_dssp             EEEECSCTTCSSCCSCCSSCCTTCCTTCEEEECCC
T ss_pred             EEEECCCCCCCCCCCCCCCCHHHcCCCCEEEEcCC
Confidence            999999854210     011234556666666654

>1fbn_A MJ fibrillarin homologue; MJ proteins, ribosomal RNA processing, snoRNP, structural genomics, BSGC structure funded by NIH; 1.60A {Methanocaldococcus jannaschii} SCOP: c.66.1.3 PDB: 1g8s_A

Probab=95.89  E-value=0.046  Score=45.69  Aligned_cols=104  Identities=13%  Similarity=0.147  Sum_probs=65.8

Q ss_pred             HhcCCCCCCEEEEEcCCHHHHHHHHHHHHHCCCCeEEEEeCChhHHHHHHHcCC--CEEEeCCCCcccHHHHHHHHHHHh
Q 017868          175 RRANIGPETNVLIMGAGPIGLVTMLGAPRAFGAPRIVIVDVDDYRLSVAKEIGA--DNIVKVSTNLQDIAEEVEKIQKAM  252 (365)
Q Consensus       175 ~~~~~~~g~~vlI~G~g~~G~~ai~~l~~~~g~~~vi~v~~~~~~~~~~~~~g~--~~~~~~~~~~~~~~~~i~~~~~~~  252 (365)
                      +...++++++||-.|+|. |..+.. +++..|...|++++.+++..+.+++.-.  ..+.....+..+...    ... .
T Consensus        68 ~~~~~~~~~~VLDlGcG~-G~~~~~-la~~~~~~~v~gvD~s~~~~~~a~~~~~~~~~v~~~~~d~~~~~~----~~~-~  140 (230)
T 1fbn_A           68 KVMPIKRDSKILYLGASA-GTTPSH-VADIADKGIVYAIEYAPRIMRELLDACAERENIIPILGDANKPQE----YAN-I  140 (230)
T ss_dssp             CCCCCCTTCEEEEESCCS-SHHHHH-HHHHTTTSEEEEEESCHHHHHHHHHHTTTCTTEEEEECCTTCGGG----GTT-T
T ss_pred             cccCCCCCCEEEEEcccC-CHHHHH-HHHHcCCcEEEEEECCHHHHHHHHHHhhcCCCeEEEECCCCCccc----ccc-c
Confidence            334577899999999865 777777 7777665589999999988776654321  112111111111100    000 1


Q ss_pred             CCCceEEEeCCCCH----HHHHHHHHhcccCCEEEEE
Q 017868          253 GTGIDVSFDCAGLN----KTMSTALGATCAGGKVCLV  285 (365)
Q Consensus       253 ~~~~d~vid~~g~~----~~~~~~~~~l~~~G~~~~~  285 (365)
                      ...+|+|+.....+    ..+..+.+.|+++|.+++.
T Consensus       141 ~~~~D~v~~~~~~~~~~~~~l~~~~~~LkpgG~l~i~  177 (230)
T 1fbn_A          141 VEKVDVIYEDVAQPNQAEILIKNAKWFLKKGGYGMIA  177 (230)
T ss_dssp             SCCEEEEEECCCSTTHHHHHHHHHHHHEEEEEEEEEE
T ss_pred             CccEEEEEEecCChhHHHHHHHHHHHhCCCCcEEEEE
Confidence            35799999655443    3477888899999999875

>3tpc_A Short chain alcohol dehydrogenase-related dehydro; structural genomics, PSI-biology, NEW YORK structural genomi research consortium; 2.34A {Sinorhizobium meliloti}

Probab=95.89  E-value=0.037  Score=47.20  Aligned_cols=81  Identities=19%  Similarity=0.216  Sum_probs=45.4

Q ss_pred             CCCEEEEEcC-CHHHHHHHHHHHHHCCCCeEEEEeCChhHHH-HHHHcCCC-EEEeCCC-CcccHHHHHHHHHHHhCCCc
Q 017868          181 PETNVLIMGA-GPIGLVTMLGAPRAFGAPRIVIVDVDDYRLS-VAKEIGAD-NIVKVST-NLQDIAEEVEKIQKAMGTGI  256 (365)
Q Consensus       181 ~g~~vlI~G~-g~~G~~ai~~l~~~~g~~~vi~v~~~~~~~~-~~~~~g~~-~~~~~~~-~~~~~~~~i~~~~~~~~~~~  256 (365)
                      .+.++||+|+ +++|.++++.++ ..|+ +|+.+++++++.+ ..++++.. ..+..+- +.++..+.+++..+. -+++
T Consensus         6 ~~k~~lVTGas~gIG~aia~~l~-~~G~-~V~~~~r~~~~~~~~~~~~~~~~~~~~~Dv~~~~~v~~~~~~~~~~-~g~i   82 (257)
T 3tpc_A            6 KSRVFIVTGASSGLGAAVTRMLA-QEGA-TVLGLDLKPPAGEEPAAELGAAVRFRNADVTNEADATAALAFAKQE-FGHV   82 (257)
T ss_dssp             TTCEEEEESTTSHHHHHHHHHHH-HTTC-EEEEEESSCC------------CEEEECCTTCHHHHHHHHHHHHHH-HSCC
T ss_pred             CCCEEEEeCCCCHHHHHHHHHHH-HCCC-EEEEEeCChHHHHHHHHHhCCceEEEEccCCCHHHHHHHHHHHHHH-cCCC
Confidence            4678999987 999999999555 5699 5677777766543 34445432 2222222 223333444444332 2479


Q ss_pred             eEEEeCCC
Q 017868          257 DVSFDCAG  264 (365)
Q Consensus       257 d~vid~~g  264 (365)
                      |++|.++|
T Consensus        83 d~lv~nAg   90 (257)
T 3tpc_A           83 HGLVNCAG   90 (257)
T ss_dssp             CEEEECCC
T ss_pred             CEEEECCC
Confidence            99999887

>4imr_A 3-oxoacyl-(acyl-carrier-protein) reductase; oxidoreductase, nicotinamide adenine dinucleotide phosphate, structural genomics; HET: NAP; 1.96A {Agrobacterium fabrum}

Probab=95.86  E-value=0.05  Score=46.97  Aligned_cols=80  Identities=16%  Similarity=0.184  Sum_probs=49.8

Q ss_pred             CCCEEEEEcC-CHHHHHHHHHHHHHCCCCeEEEEeCChhHHH-H---HHHcCCCE-EEeCCC-CcccHHHHHHHHHHHhC
Q 017868          181 PETNVLIMGA-GPIGLVTMLGAPRAFGAPRIVIVDVDDYRLS-V---AKEIGADN-IVKVST-NLQDIAEEVEKIQKAMG  253 (365)
Q Consensus       181 ~g~~vlI~G~-g~~G~~ai~~l~~~~g~~~vi~v~~~~~~~~-~---~~~~g~~~-~~~~~~-~~~~~~~~i~~~~~~~~  253 (365)
                      .|+++||+|+ +++|.++++.++ ..|+ +|+.+++++++.+ .   +++.+... .+..+- +..+....+++..+.  
T Consensus        32 ~gk~~lVTGas~GIG~aia~~la-~~G~-~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~Dv~~~~~~~~~~~~~~~~--  107 (275)
T 4imr_A           32 RGRTALVTGSSRGIGAAIAEGLA-GAGA-HVILHGVKPGSTAAVQQRIIASGGTAQELAGDLSEAGAGTDLIERAEAI--  107 (275)
T ss_dssp             TTCEEEETTCSSHHHHHHHHHHH-HTTC-EEEEEESSTTTTHHHHHHHHHTTCCEEEEECCTTSTTHHHHHHHHHHHH--
T ss_pred             CCCEEEEECCCCHHHHHHHHHHH-HCCC-EEEEEcCCHHHHHHHHHHHHhcCCeEEEEEecCCCHHHHHHHHHHHHHh--
Confidence            5688999987 999999999555 5599 5777777665433 2   22334322 222222 223444444444432  


Q ss_pred             CCceEEEeCCC
Q 017868          254 TGIDVSFDCAG  264 (365)
Q Consensus       254 ~~~d~vid~~g  264 (365)
                      +++|++|.++|
T Consensus       108 g~iD~lvnnAg  118 (275)
T 4imr_A          108 APVDILVINAS  118 (275)
T ss_dssp             SCCCEEEECCC
T ss_pred             CCCCEEEECCC
Confidence            68999999988

>2c07_A 3-oxoacyl-(acyl-carrier protein) reductase; oxidoreductase, FABG, short-chain alcohol reductase, fatty acid biosynthesis, apicoplast; 1.5A {Plasmodium falciparum} SCOP: c.2.1.2

Probab=95.85  E-value=0.08  Score=45.84  Aligned_cols=81  Identities=17%  Similarity=0.207  Sum_probs=48.4

Q ss_pred             CCCEEEEEcC-CHHHHHHHHHHHHHCCCCeEEEEeCChhHHHH-HHH---cCCCE-EEeCCC-CcccHHHHHHHHHHHhC
Q 017868          181 PETNVLIMGA-GPIGLVTMLGAPRAFGAPRIVIVDVDDYRLSV-AKE---IGADN-IVKVST-NLQDIAEEVEKIQKAMG  253 (365)
Q Consensus       181 ~g~~vlI~G~-g~~G~~ai~~l~~~~g~~~vi~v~~~~~~~~~-~~~---~g~~~-~~~~~~-~~~~~~~~i~~~~~~~~  253 (365)
                      .+.++||+|+ |++|.++++.++ ..|+ .|+++++++++.+. .++   .+... .+..+- +.+++.+.++++.+. .
T Consensus        43 ~~k~vlITGasggIG~~la~~L~-~~G~-~V~~~~r~~~~~~~~~~~l~~~~~~~~~~~~Dl~d~~~v~~~~~~~~~~-~  119 (285)
T 2c07_A           43 ENKVALVTGAGRGIGREIAKMLA-KSVS-HVICISRTQKSCDSVVDEIKSFGYESSGYAGDVSKKEEISEVINKILTE-H  119 (285)
T ss_dssp             SSCEEEEESTTSHHHHHHHHHHT-TTSS-EEEEEESSHHHHHHHHHHHHTTTCCEEEEECCTTCHHHHHHHHHHHHHH-C
T ss_pred             CCCEEEEECCCcHHHHHHHHHHH-HcCC-EEEEEcCCHHHHHHHHHHHHhcCCceeEEECCCCCHHHHHHHHHHHHHh-c
Confidence            4678999987 999999999454 5588 46667777665442 222   24332 222222 223333333333332 3


Q ss_pred             CCceEEEeCCC
Q 017868          254 TGIDVSFDCAG  264 (365)
Q Consensus       254 ~~~d~vid~~g  264 (365)
                      +++|++|.++|
T Consensus       120 ~~id~li~~Ag  130 (285)
T 2c07_A          120 KNVDILVNNAG  130 (285)
T ss_dssp             SCCCEEEECCC
T ss_pred             CCCCEEEECCC
Confidence            57999999887

>2qq5_A DHRS1, dehydrogenase/reductase SDR family member 1; short-chain, structura genomics consortium, SGC, oxidoreductase; 1.80A {Homo sapiens}

Probab=95.85  E-value=0.042  Score=46.92  Aligned_cols=82  Identities=22%  Similarity=0.206  Sum_probs=49.0

Q ss_pred             CCCEEEEEcC-CHHHHHHHHHHHHHCCCCeEEEEeCChhHHHH-HHHc---CCCE-EEeCCC-CcccHHHHHHHHHHHhC
Q 017868          181 PETNVLIMGA-GPIGLVTMLGAPRAFGAPRIVIVDVDDYRLSV-AKEI---GADN-IVKVST-NLQDIAEEVEKIQKAMG  253 (365)
Q Consensus       181 ~g~~vlI~G~-g~~G~~ai~~l~~~~g~~~vi~v~~~~~~~~~-~~~~---g~~~-~~~~~~-~~~~~~~~i~~~~~~~~  253 (365)
                      .+.++||+|+ +++|.++++.++ ..|+ +|+.+++++++.+. .+++   +... .+..+- +.+++...+++..+...
T Consensus         4 ~~k~vlVTGas~gIG~~ia~~l~-~~G~-~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~Dv~~~~~v~~~~~~~~~~~~   81 (260)
T 2qq5_A            4 NGQVCVVTGASRGIGRGIALQLC-KAGA-TVYITGRHLDTLRVVAQEAQSLGGQCVPVVCDSSQESEVRSLFEQVDREQQ   81 (260)
T ss_dssp             TTCEEEESSTTSHHHHHHHHHHH-HTTC-EEEEEESCHHHHHHHHHHHHHHSSEEEEEECCTTSHHHHHHHHHHHHHHHT
T ss_pred             CCCEEEEeCCCchHHHHHHHHHH-HCCC-EEEEEeCCHHHHHHHHHHHHHcCCceEEEECCCCCHHHHHHHHHHHHHhcC
Confidence            4678999987 999999999555 5598 57777787766543 2322   4321 222222 22233333333332214


Q ss_pred             CCceEEEeCCC
Q 017868          254 TGIDVSFDCAG  264 (365)
Q Consensus       254 ~~~d~vid~~g  264 (365)
                      +++|++|.++|
T Consensus        82 g~id~lvnnAg   92 (260)
T 2qq5_A           82 GRLDVLVNNAY   92 (260)
T ss_dssp             TCCCEEEECCC
T ss_pred             CCceEEEECCc
Confidence            57999999984

>3ezy_A Dehydrogenase; structural genomics, unknown function, PSI-2, protein structure initiative; 2.04A {Thermotoga maritima}

Probab=95.84  E-value=0.084  Score=47.14  Aligned_cols=132  Identities=18%  Similarity=0.247  Sum_probs=80.4

Q ss_pred             EEEEEcCCHHHHHHHHHHHHHCCCCeEEEEeCChhHHH-HHHHcCCCEEEeCCCCcccHHHHHHHHHHHhCCCceEEEeC
Q 017868          184 NVLIMGAGPIGLVTMLGAPRAFGAPRIVIVDVDDYRLS-VAKEIGADNIVKVSTNLQDIAEEVEKIQKAMGTGIDVSFDC  262 (365)
Q Consensus       184 ~vlI~G~g~~G~~ai~~l~~~~g~~~vi~v~~~~~~~~-~~~~~g~~~~~~~~~~~~~~~~~i~~~~~~~~~~~d~vid~  262 (365)
                      +|.|+|+|.+|...+..+.+..+++.+.+.++++++.+ +++++|.....      .++.+.+.      ...+|+|+.|
T Consensus         4 rvgiIG~G~~g~~~~~~l~~~~~~~l~av~d~~~~~~~~~~~~~~~~~~~------~~~~~ll~------~~~~D~V~i~   71 (344)
T 3ezy_A            4 RIGVIGLGRIGTIHAENLKMIDDAILYAISDVREDRLREMKEKLGVEKAY------KDPHELIE------DPNVDAVLVC   71 (344)
T ss_dssp             EEEEECCSHHHHHHHHHGGGSTTEEEEEEECSCHHHHHHHHHHHTCSEEE------SSHHHHHH------CTTCCEEEEC
T ss_pred             EEEEEcCCHHHHHHHHHHHhCCCcEEEEEECCCHHHHHHHHHHhCCCcee------CCHHHHhc------CCCCCEEEEc
Confidence            68899999999988774545446655556677777754 56778865433      23333332      3579999999


Q ss_pred             CCCHHHHHHHHHhcccCCEEEEEccCCCCccccchH----hhhcCcEEE-e-ecccCCcHHHHHHHHHcCCC
Q 017868          263 AGLNKTMSTALGATCAGGKVCLVGMGHHEMTVPLTP----AAVREVDVV-G-VFRYKNTWPLCLELLRSGKI  328 (365)
Q Consensus       263 ~g~~~~~~~~~~~l~~~G~~~~~g~~~~~~~~~~~~----~~~~~~~i~-~-~~~~~~~~~~~~~~l~~g~~  328 (365)
                      +....+...+..++..+-+ +++.-+..........    .-.+++.+. + ...+...++.+.+++++|.+
T Consensus        72 tp~~~h~~~~~~al~~gk~-v~~EKP~~~~~~e~~~l~~~a~~~g~~~~v~~~~R~~p~~~~~k~~i~~G~i  142 (344)
T 3ezy_A           72 SSTNTHSELVIACAKAKKH-VFCEKPLSLNLADVDRMIEETKKADVILFTGFNRRFDRNFKKLKEAVENGTI  142 (344)
T ss_dssp             SCGGGHHHHHHHHHHTTCE-EEEESCSCSCHHHHHHHHHHHHHHTCCEEEECGGGGCHHHHHHHHHHHTTTT
T ss_pred             CCCcchHHHHHHHHhcCCe-EEEECCCCCCHHHHHHHHHHHHHhCCcEEEeecccCCHHHHHHHHHHHcCCC
Confidence            9987777778888876644 4443111110001111    112233222 2 22346678889999999887

>4dmm_A 3-oxoacyl-[acyl-carrier-protein] reductase; rossmann fold, oxoacyl-ACP reductase, NADP binding, fatty AC biosynthsis, oxidoreductase; HET: NAP; 2.38A {Synechococcus elongatus} PDB: 4dml_A*

Probab=95.84  E-value=0.044  Score=47.12  Aligned_cols=82  Identities=20%  Similarity=0.244  Sum_probs=48.2

Q ss_pred             CCCEEEEEcC-CHHHHHHHHHHHHHCCCCeEEEEeC-ChhHHHH----HHHcCCCE-EEeCCC-CcccHHHHHHHHHHHh
Q 017868          181 PETNVLIMGA-GPIGLVTMLGAPRAFGAPRIVIVDV-DDYRLSV----AKEIGADN-IVKVST-NLQDIAEEVEKIQKAM  252 (365)
Q Consensus       181 ~g~~vlI~G~-g~~G~~ai~~l~~~~g~~~vi~v~~-~~~~~~~----~~~~g~~~-~~~~~~-~~~~~~~~i~~~~~~~  252 (365)
                      .+.++||+|+ +++|.++++.++ ..|++ |+.+.+ ++++.+.    +++.+... .+..+- +.++..+.++++.+..
T Consensus        27 ~~k~vlVTGas~gIG~aia~~la-~~G~~-V~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~D~~d~~~v~~~~~~~~~~~  104 (269)
T 4dmm_A           27 TDRIALVTGASRGIGRAIALELA-AAGAK-VAVNYASSAGAADEVVAAIAAAGGEAFAVKADVSQESEVEALFAAVIERW  104 (269)
T ss_dssp             TTCEEEETTCSSHHHHHHHHHHH-HTTCE-EEEEESSCHHHHHHHHHHHHHTTCCEEEEECCTTSHHHHHHHHHHHHHHH
T ss_pred             CCCEEEEECCCCHHHHHHHHHHH-HCCCE-EEEEeCCChHHHHHHHHHHHhcCCcEEEEECCCCCHHHHHHHHHHHHHHc
Confidence            5778999987 999999999555 56995 555544 5544332    23344332 222222 2233333444443332


Q ss_pred             CCCceEEEeCCCC
Q 017868          253 GTGIDVSFDCAGL  265 (365)
Q Consensus       253 ~~~~d~vid~~g~  265 (365)
                       +++|++|.++|.
T Consensus       105 -g~id~lv~nAg~  116 (269)
T 4dmm_A          105 -GRLDVLVNNAGI  116 (269)
T ss_dssp             -SCCCEEEECCCC
T ss_pred             -CCCCEEEECCCC
Confidence             589999998873

>1fmc_A 7 alpha-hydroxysteroid dehydrogenase; short-chain dehydrogenase/reductase, bIle acid catabolism, oxidoreductase; HET: CHO NAD; 1.80A {Escherichia coli} SCOP: c.2.1.2 PDB: 1ahi_A* 1ahh_A*

Probab=95.84  E-value=0.056  Score=45.76  Aligned_cols=81  Identities=17%  Similarity=0.264  Sum_probs=48.7

Q ss_pred             CCCEEEEEcC-CHHHHHHHHHHHHHCCCCeEEEEeCChhHHHH-H---HHcCCCE-EEeCCCC-cccHHHHHHHHHHHhC
Q 017868          181 PETNVLIMGA-GPIGLVTMLGAPRAFGAPRIVIVDVDDYRLSV-A---KEIGADN-IVKVSTN-LQDIAEEVEKIQKAMG  253 (365)
Q Consensus       181 ~g~~vlI~G~-g~~G~~ai~~l~~~~g~~~vi~v~~~~~~~~~-~---~~~g~~~-~~~~~~~-~~~~~~~i~~~~~~~~  253 (365)
                      .+.++||+|+ |++|.++++.++ ..|+ .|+++++++++.+. .   +..+... .+..+-. .+++.+.++++.+. .
T Consensus        10 ~~~~vlVtGasggiG~~la~~l~-~~G~-~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~D~~~~~~~~~~~~~~~~~-~   86 (255)
T 1fmc_A           10 DGKCAIITGAGAGIGKEIAITFA-TAGA-SVVVSDINADAANHVVDEIQQLGGQAFACRCDITSEQELSALADFAISK-L   86 (255)
T ss_dssp             TTCEEEETTTTSHHHHHHHHHHH-TTTC-EEEEEESCHHHHHHHHHHHHHTTCCEEEEECCTTCHHHHHHHHHHHHHH-H
T ss_pred             CCCEEEEECCccHHHHHHHHHHH-HCCC-EEEEEcCCHHHHHHHHHHHHHhCCceEEEEcCCCCHHHHHHHHHHHHHh-c
Confidence            4678999987 999999999554 5598 57777787765432 2   2234322 2222222 22333333333222 2


Q ss_pred             CCceEEEeCCC
Q 017868          254 TGIDVSFDCAG  264 (365)
Q Consensus       254 ~~~d~vid~~g  264 (365)
                      +++|++|.++|
T Consensus        87 ~~~d~vi~~Ag   97 (255)
T 1fmc_A           87 GKVDILVNNAG   97 (255)
T ss_dssp             SSCCEEEECCC
T ss_pred             CCCCEEEECCC
Confidence            48999999887

>1mxh_A Pteridine reductase 2; SDR topology, protein-substrate complex, oxidoreductase; HET: NAP DHF; 2.20A {Trypanosoma cruzi} SCOP: c.2.1.2 PDB: 1mxf_A*

Probab=95.83  E-value=0.062  Score=46.26  Aligned_cols=81  Identities=16%  Similarity=0.135  Sum_probs=48.3

Q ss_pred             CCCEEEEEcC-CHHHHHHHHHHHHHCCCCeEEEEeC-ChhHHHH-HHHc----CCCE-EEeCCCC-c----ccHHHHHHH
Q 017868          181 PETNVLIMGA-GPIGLVTMLGAPRAFGAPRIVIVDV-DDYRLSV-AKEI----GADN-IVKVSTN-L----QDIAEEVEK  247 (365)
Q Consensus       181 ~g~~vlI~G~-g~~G~~ai~~l~~~~g~~~vi~v~~-~~~~~~~-~~~~----g~~~-~~~~~~~-~----~~~~~~i~~  247 (365)
                      .+.++||+|+ +++|.+++..++ ..|+ .|+.+++ ++++.+. .+++    +... .+..+-. .    +++...+++
T Consensus        10 ~~k~~lVTGas~gIG~~ia~~l~-~~G~-~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~~Dl~~~~~~~~~~~~~~~~   87 (276)
T 1mxh_A           10 ECPAAVITGGARRIGHSIAVRLH-QQGF-RVVVHYRHSEGAAQRLVAELNAARAGSAVLCKGDLSLSSSLLDCCEDIIDC   87 (276)
T ss_dssp             -CCEEEETTCSSHHHHHHHHHHH-HTTC-EEEEEESSCHHHHHHHHHHHHHHSTTCEEEEECCCSSSTTHHHHHHHHHHH
T ss_pred             CCCEEEEeCCCcHHHHHHHHHHH-HCCC-EEEEEeCCChHHHHHHHHHHHHhcCCceEEEeccCCCccccHHHHHHHHHH
Confidence            4678999987 999999999555 5698 5777777 6665442 2332    4322 2222222 2    233333333


Q ss_pred             HHHHhCCCceEEEeCCC
Q 017868          248 IQKAMGTGIDVSFDCAG  264 (365)
Q Consensus       248 ~~~~~~~~~d~vid~~g  264 (365)
                      +.+.. +++|++|.++|
T Consensus        88 ~~~~~-g~id~lv~nAg  103 (276)
T 1mxh_A           88 SFRAF-GRCDVLVNNAS  103 (276)
T ss_dssp             HHHHH-SCCCEEEECCC
T ss_pred             HHHhc-CCCCEEEECCC
Confidence            33322 47999999887

>3tzq_B Short-chain type dehydrogenase/reductase; ssgcid, structural genomics, seattle structural genomics CEN infectious disease, oxidoreductase; 2.50A {Mycobacterium marinum} SCOP: c.2.1.0

Probab=95.80  E-value=0.059  Score=46.33  Aligned_cols=82  Identities=24%  Similarity=0.295  Sum_probs=51.6

Q ss_pred             CCCEEEEEcC-CHHHHHHHHHHHHHCCCCeEEEEeCChhHHH-HHHHcCCCE-EEeCCC-CcccHHHHHHHHHHHhCCCc
Q 017868          181 PETNVLIMGA-GPIGLVTMLGAPRAFGAPRIVIVDVDDYRLS-VAKEIGADN-IVKVST-NLQDIAEEVEKIQKAMGTGI  256 (365)
Q Consensus       181 ~g~~vlI~G~-g~~G~~ai~~l~~~~g~~~vi~v~~~~~~~~-~~~~~g~~~-~~~~~~-~~~~~~~~i~~~~~~~~~~~  256 (365)
                      .++++||+|+ +++|.++++.++ ..|+ +|+.+++++++.+ ..++++... .+..+- +.+++.+.+++..+.. +++
T Consensus        10 ~~k~vlVTGas~gIG~aia~~l~-~~G~-~V~~~~r~~~~~~~~~~~~~~~~~~~~~Dv~~~~~v~~~~~~~~~~~-g~i   86 (271)
T 3tzq_B           10 ENKVAIITGACGGIGLETSRVLA-RAGA-RVVLADLPETDLAGAAASVGRGAVHHVVDLTNEVSVRALIDFTIDTF-GRL   86 (271)
T ss_dssp             TTCEEEEETTTSHHHHHHHHHHH-HTTC-EEEEEECTTSCHHHHHHHHCTTCEEEECCTTCHHHHHHHHHHHHHHH-SCC
T ss_pred             CCCEEEEECCCcHHHHHHHHHHH-HCCC-EEEEEcCCHHHHHHHHHHhCCCeEEEECCCCCHHHHHHHHHHHHHHc-CCC
Confidence            4689999987 999999999555 5699 5777777776554 445555322 222222 2233344444443332 479


Q ss_pred             eEEEeCCCC
Q 017868          257 DVSFDCAGL  265 (365)
Q Consensus       257 d~vid~~g~  265 (365)
                      |+++.++|.
T Consensus        87 d~lv~nAg~   95 (271)
T 3tzq_B           87 DIVDNNAAH   95 (271)
T ss_dssp             CEEEECCCC
T ss_pred             CEEEECCCC
Confidence            999998873

>3edm_A Short chain dehydrogenase; structural genomics, oxidoreductase, PSI-2, P structure initiative; 2.30A {Agrobacterium tumefaciens str}

Probab=95.78  E-value=0.081  Score=45.12  Aligned_cols=82  Identities=15%  Similarity=0.221  Sum_probs=47.9

Q ss_pred             CCCEEEEEcC-CHHHHHHHHHHHHHCCCCeEEEEeCChhHHHH----HHHcCCC-EEEeCCC-CcccHHHHHHHHHHHhC
Q 017868          181 PETNVLIMGA-GPIGLVTMLGAPRAFGAPRIVIVDVDDYRLSV----AKEIGAD-NIVKVST-NLQDIAEEVEKIQKAMG  253 (365)
Q Consensus       181 ~g~~vlI~G~-g~~G~~ai~~l~~~~g~~~vi~v~~~~~~~~~----~~~~g~~-~~~~~~~-~~~~~~~~i~~~~~~~~  253 (365)
                      .+.++||+|+ +++|.++++.++ ..|+++++...+++++.+.    +++.+.. ..+..+- +.++....++++.+.. 
T Consensus         7 ~~k~vlVTGas~GIG~aia~~la-~~G~~V~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~Dv~~~~~v~~~~~~~~~~~-   84 (259)
T 3edm_A            7 TNRTIVVAGAGRDIGRACAIRFA-QEGANVVLTYNGAAEGAATAVAEIEKLGRSALAIKADLTNAAEVEAAISAAADKF-   84 (259)
T ss_dssp             TTCEEEEETTTSHHHHHHHHHHH-HTTCEEEEEECSSCHHHHHHHHHHHTTTSCCEEEECCTTCHHHHHHHHHHHHHHH-
T ss_pred             CCCEEEEECCCchHHHHHHHHHH-HCCCEEEEEcCCCHHHHHHHHHHHHhcCCceEEEEcCCCCHHHHHHHHHHHHHHh-
Confidence            5789999987 999999999555 5599544443555544332    2333432 2222222 2233334444443332 


Q ss_pred             CCceEEEeCCC
Q 017868          254 TGIDVSFDCAG  264 (365)
Q Consensus       254 ~~~d~vid~~g  264 (365)
                      +++|++|.++|
T Consensus        85 g~id~lv~nAg   95 (259)
T 3edm_A           85 GEIHGLVHVAG   95 (259)
T ss_dssp             CSEEEEEECCC
T ss_pred             CCCCEEEECCC
Confidence            58999999886

>3ek2_A Enoyl-(acyl-carrier-protein) reductase (NADH); ssgcid, oxidoreductase, structural genomics; 1.90A {Burkholderia pseudomallei 1710B} SCOP: c.2.1.2

Probab=95.77  E-value=0.069  Score=45.71  Aligned_cols=83  Identities=16%  Similarity=0.149  Sum_probs=50.5

Q ss_pred             CCCCCEEEEEcC---CHHHHHHHHHHHHHCCCCeEEEEeCChhHHHH----HHHcCCCEEEeCCCC-cccHHHHHHHHHH
Q 017868          179 IGPETNVLIMGA---GPIGLVTMLGAPRAFGAPRIVIVDVDDYRLSV----AKEIGADNIVKVSTN-LQDIAEEVEKIQK  250 (365)
Q Consensus       179 ~~~g~~vlI~G~---g~~G~~ai~~l~~~~g~~~vi~v~~~~~~~~~----~~~~g~~~~~~~~~~-~~~~~~~i~~~~~  250 (365)
                      ..+++++||+|+   +++|.++++.++ ..|+ +|+.++++++..+.    .++.+....+..+-. ..+....++++.+
T Consensus        11 ~~~~k~vlITGa~~~~giG~~ia~~l~-~~G~-~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~Dv~~~~~v~~~~~~~~~   88 (271)
T 3ek2_A           11 FLDGKRILLTGLLSNRSIAYGIAKACK-REGA-ELAFTYVGDRFKDRITEFAAEFGSELVFPCDVADDAQIDALFASLKT   88 (271)
T ss_dssp             TTTTCEEEECCCCSTTSHHHHHHHHHH-HTTC-EEEEEESSGGGHHHHHHHHHHTTCCCEEECCTTCHHHHHHHHHHHHH
T ss_pred             ccCCCEEEEeCCCCCCcHHHHHHHHHH-HcCC-CEEEEecchhhHHHHHHHHHHcCCcEEEECCCCCHHHHHHHHHHHHH
Confidence            457889999974   689999999555 5599 57777666543332    244443333333322 2333334444433


Q ss_pred             HhCCCceEEEeCCC
Q 017868          251 AMGTGIDVSFDCAG  264 (365)
Q Consensus       251 ~~~~~~d~vid~~g  264 (365)
                      . .+++|++|.++|
T Consensus        89 ~-~g~id~lv~nAg  101 (271)
T 3ek2_A           89 H-WDSLDGLVHSIG  101 (271)
T ss_dssp             H-CSCEEEEEECCC
T ss_pred             H-cCCCCEEEECCc
Confidence            2 358999999887

>2glx_A 1,5-anhydro-D-fructose reductase; NADP(H) dependent reductase, rossmann-fold, sugar metabolism, 1,5-anhydro-D-mannitol, oxidoreductase; HET: NDP; 2.20A {Ensifer adhaerens}

Probab=95.76  E-value=0.059  Score=47.82  Aligned_cols=128  Identities=18%  Similarity=0.163  Sum_probs=77.5

Q ss_pred             EEEEEcCCHHHHHH-HHHHHHHCCCCeEEEEeCChhHHH-HHHHcCCCEEEeCCCCcccHHHHHHHHHHHhCCCceEEEe
Q 017868          184 NVLIMGAGPIGLVT-MLGAPRAFGAPRIVIVDVDDYRLS-VAKEIGADNIVKVSTNLQDIAEEVEKIQKAMGTGIDVSFD  261 (365)
Q Consensus       184 ~vlI~G~g~~G~~a-i~~l~~~~g~~~vi~v~~~~~~~~-~~~~~g~~~~~~~~~~~~~~~~~i~~~~~~~~~~~d~vid  261 (365)
                      +|.|+|+|.+|... +..+.+ .+.+.+.++++++++.+ +++++|....  +    .++.+.+.      ...+|+|+.
T Consensus         2 ~vgiiG~G~~g~~~~~~~l~~-~~~~~vav~d~~~~~~~~~~~~~g~~~~--~----~~~~~~l~------~~~~D~V~i   68 (332)
T 2glx_A            2 RWGLIGASTIAREWVIGAIRA-TGGEVVSMMSTSAERGAAYATENGIGKS--V----TSVEELVG------DPDVDAVYV   68 (332)
T ss_dssp             EEEEESCCHHHHHTHHHHHHH-TTCEEEEEECSCHHHHHHHHHHTTCSCC--B----SCHHHHHT------CTTCCEEEE
T ss_pred             eEEEEcccHHHHHhhhHHhhc-CCCeEEEEECCCHHHHHHHHHHcCCCcc--c----CCHHHHhc------CCCCCEEEE
Confidence            58899999999976 653555 67765556788877764 5677776421  1    23333221      347999999


Q ss_pred             CCCCHHHHHHHHHhcccCCEEEEEccCCCCccccch---Hh----hhcCcEEEee--cccCCcHHHHHHHHHcCCC
Q 017868          262 CAGLNKTMSTALGATCAGGKVCLVGMGHHEMTVPLT---PA----AVREVDVVGV--FRYKNTWPLCLELLRSGKI  328 (365)
Q Consensus       262 ~~g~~~~~~~~~~~l~~~G~~~~~g~~~~~~~~~~~---~~----~~~~~~i~~~--~~~~~~~~~~~~~l~~g~~  328 (365)
                      ++....+.+.+..++..+ +-+++.-   +......   .+    -.+++.+.-.  ..+...++.+.+++++|.+
T Consensus        69 ~tp~~~h~~~~~~al~~G-k~v~~ek---P~~~~~~~~~~l~~~a~~~g~~~~~~~~~r~~p~~~~~~~~i~~g~i  140 (332)
T 2glx_A           69 STTNELHREQTLAAIRAG-KHVLCEK---PLAMTLEDAREMVVAAREAGVVLGTNHHLRNAAAHRAMRDAIAEGRI  140 (332)
T ss_dssp             CSCGGGHHHHHHHHHHTT-CEEEECS---SSCSSHHHHHHHHHHHHHHTCCEEECCCGGGSHHHHHHHHHHHTTTT
T ss_pred             eCChhHhHHHHHHHHHCC-CeEEEeC---CCcCCHHHHHHHHHHHHHcCCEEEEeehhhcCHHHHHHHHHHHcCCC
Confidence            998777777777788765 4444421   1111111   11    1223333222  2235567888899999877

>2uvd_A 3-oxoacyl-(acyl-carrier-protein) reductase; beta-ketoacyl- (acyl carrier protein) reductase, short-chain dehydrogenase/reductase (SDR); 2.4A {Bacillus anthracis}

Probab=95.76  E-value=0.07  Score=45.06  Aligned_cols=81  Identities=22%  Similarity=0.383  Sum_probs=48.3

Q ss_pred             CCCEEEEEcC-CHHHHHHHHHHHHHCCCCeEEEEeC-ChhHHHH-H---HHcCCCE-EEeCCC-CcccHHHHHHHHHHHh
Q 017868          181 PETNVLIMGA-GPIGLVTMLGAPRAFGAPRIVIVDV-DDYRLSV-A---KEIGADN-IVKVST-NLQDIAEEVEKIQKAM  252 (365)
Q Consensus       181 ~g~~vlI~G~-g~~G~~ai~~l~~~~g~~~vi~v~~-~~~~~~~-~---~~~g~~~-~~~~~~-~~~~~~~~i~~~~~~~  252 (365)
                      .+.++||+|+ |++|.++++.++ ..|+ .|+.+++ ++++.+. .   ++.+... .+..+- +.+++.+.+++..+..
T Consensus         3 ~~k~vlVTGas~giG~~ia~~l~-~~G~-~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~D~~~~~~~~~~~~~~~~~~   80 (246)
T 2uvd_A            3 KGKVALVTGASRGIGRAIAIDLA-KQGA-NVVVNYAGNEQKANEVVDEIKKLGSDAIAVRADVANAEDVTNMVKQTVDVF   80 (246)
T ss_dssp             TTCEEEETTCSSHHHHHHHHHHH-HTTC-EEEEEESSCHHHHHHHHHHHHHTTCCEEEEECCTTCHHHHHHHHHHHHHHH
T ss_pred             CCCEEEEECCCcHHHHHHHHHHH-HCCC-EEEEEeCCCHHHHHHHHHHHHhcCCcEEEEEcCCCCHHHHHHHHHHHHHHc
Confidence            4678999987 999999999555 5699 4666666 6655432 2   2334332 222222 2233334444433322


Q ss_pred             CCCceEEEeCCC
Q 017868          253 GTGIDVSFDCAG  264 (365)
Q Consensus       253 ~~~~d~vid~~g  264 (365)
                       +++|++|.++|
T Consensus        81 -g~id~lv~nAg   91 (246)
T 2uvd_A           81 -GQVDILVNNAG   91 (246)
T ss_dssp             -SCCCEEEECCC
T ss_pred             -CCCCEEEECCC
Confidence             47999999887

>4e3z_A Putative oxidoreductase protein; PSI-biology, structural genomics, protein structure initiati nysgrc,oxidoreductase; 2.00A {Rhizobium etli}

Probab=95.75  E-value=0.044  Score=47.16  Aligned_cols=83  Identities=20%  Similarity=0.186  Sum_probs=49.5

Q ss_pred             CCCCEEEEEcC-CHHHHHHHHHHHHHCCCCeEEEEeCChhHHHHH----HHcCCCE-EEeCCC-CcccHHHHHHHHHHHh
Q 017868          180 GPETNVLIMGA-GPIGLVTMLGAPRAFGAPRIVIVDVDDYRLSVA----KEIGADN-IVKVST-NLQDIAEEVEKIQKAM  252 (365)
Q Consensus       180 ~~g~~vlI~G~-g~~G~~ai~~l~~~~g~~~vi~v~~~~~~~~~~----~~~g~~~-~~~~~~-~~~~~~~~i~~~~~~~  252 (365)
                      ..+.++||+|+ +++|.++++.++ ..|+++++...+++++.+.+    ++.+... .+..+- +.+++.+.++++.+..
T Consensus        24 ~~~k~vlITGas~gIG~a~a~~l~-~~G~~V~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~Dl~~~~~v~~~~~~~~~~~  102 (272)
T 4e3z_A           24 SDTPVVLVTGGSRGIGAAVCRLAA-RQGWRVGVNYAANREAADAVVAAITESGGEAVAIPGDVGNAADIAAMFSAVDRQF  102 (272)
T ss_dssp             CCSCEEEETTTTSHHHHHHHHHHH-HTTCEEEEEESSCHHHHHHHHHHHHHTTCEEEEEECCTTCHHHHHHHHHHHHHHH
T ss_pred             cCCCEEEEECCCchHHHHHHHHHH-HCCCEEEEEcCCChhHHHHHHHHHHhcCCcEEEEEcCCCCHHHHHHHHHHHHHhC
Confidence            45778999987 999999999554 56996545546666654432    3334322 222222 2233334444443322


Q ss_pred             CCCceEEEeCCC
Q 017868          253 GTGIDVSFDCAG  264 (365)
Q Consensus       253 ~~~~d~vid~~g  264 (365)
                       +++|++|.++|
T Consensus       103 -g~id~li~nAg  113 (272)
T 4e3z_A          103 -GRLDGLVNNAG  113 (272)
T ss_dssp             -SCCCEEEECCC
T ss_pred             -CCCCEEEECCC
Confidence             47999999887

>1xu9_A Corticosteroid 11-beta-dehydrogenase, isozyme 1; hydroxysteroid, SDR, oxidoreductase; HET: NDP CPS MES; 1.55A {Homo sapiens} SCOP: c.2.1.2 PDB: 1xu7_A* 3bzu_A* 3czr_A* 3d3e_A* 3d4n_A* 3fco_A* 3frj_A* 3h6k_A* 3hfg_A* 3oq1_A* 3qqp_A* 3pdj_A* 3d5q_A* 2rbe_A* 3byz_A* 3ey4_A* 3tfq_A* 3ch6_A* 2irw_A* 2ilt_A* ...

Probab=95.75  E-value=0.05  Score=47.14  Aligned_cols=79  Identities=20%  Similarity=0.208  Sum_probs=47.9

Q ss_pred             CCCEEEEEcC-CHHHHHHHHHHHHHCCCCeEEEEeCChhHHHHH----HHcCCCE--EEeCCCCc-ccHHHHHHHHHHHh
Q 017868          181 PETNVLIMGA-GPIGLVTMLGAPRAFGAPRIVIVDVDDYRLSVA----KEIGADN--IVKVSTNL-QDIAEEVEKIQKAM  252 (365)
Q Consensus       181 ~g~~vlI~G~-g~~G~~ai~~l~~~~g~~~vi~v~~~~~~~~~~----~~~g~~~--~~~~~~~~-~~~~~~i~~~~~~~  252 (365)
                      ++.++||+|+ |++|.++++.++ ..|+ .|+.+++++++.+.+    ++.+...  .+..+-.+ ++....+++..+. 
T Consensus        27 ~~k~vlITGasggIG~~la~~l~-~~G~-~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~Dl~d~~~v~~~~~~~~~~-  103 (286)
T 1xu9_A           27 QGKKVIVTGASKGIGREMAYHLA-KMGA-HVVVTARSKETLQKVVSHCLELGAASAHYIAGTMEDMTFAEQFVAQAGKL-  103 (286)
T ss_dssp             TTCEEEESSCSSHHHHHHHHHHH-HTTC-EEEEEESCHHHHHHHHHHHHHHTCSEEEEEECCTTCHHHHHHHHHHHHHH-
T ss_pred             CCCEEEEeCCCcHHHHHHHHHHH-HCCC-EEEEEECCHHHHHHHHHHHHHhCCCceEEEeCCCCCHHHHHHHHHHHHHH-
Confidence            4678999987 999999999454 5698 577888887765432    2334322  22222222 2233333333322 


Q ss_pred             CCCceEEEeC
Q 017868          253 GTGIDVSFDC  262 (365)
Q Consensus       253 ~~~~d~vid~  262 (365)
                      .+++|++|.+
T Consensus       104 ~g~iD~li~n  113 (286)
T 1xu9_A          104 MGGLDMLILN  113 (286)
T ss_dssp             HTSCSEEEEC
T ss_pred             cCCCCEEEEC
Confidence            2489999987

>2zat_A Dehydrogenase/reductase SDR family member 4; alpha/beta, oxidoreductase; HET: NAP; 1.50A {Sus scrofa} PDB: 3o4r_A*

Probab=95.73  E-value=0.074  Score=45.30  Aligned_cols=81  Identities=16%  Similarity=0.143  Sum_probs=49.3

Q ss_pred             CCCEEEEEcC-CHHHHHHHHHHHHHCCCCeEEEEeCChhHHHH-HH---HcCCCE-EEeCCC-CcccHHHHHHHHHHHhC
Q 017868          181 PETNVLIMGA-GPIGLVTMLGAPRAFGAPRIVIVDVDDYRLSV-AK---EIGADN-IVKVST-NLQDIAEEVEKIQKAMG  253 (365)
Q Consensus       181 ~g~~vlI~G~-g~~G~~ai~~l~~~~g~~~vi~v~~~~~~~~~-~~---~~g~~~-~~~~~~-~~~~~~~~i~~~~~~~~  253 (365)
                      .+.++||+|+ |++|.++++.++ ..|+ .|+.+++++++.+. .+   +.+... .+..+- +.+++...+++..+. -
T Consensus        13 ~~k~vlVTGas~gIG~~ia~~l~-~~G~-~V~~~~r~~~~~~~~~~~l~~~~~~~~~~~~D~~~~~~~~~~~~~~~~~-~   89 (260)
T 2zat_A           13 ENKVALVTASTDGIGLAIARRLA-QDGA-HVVVSSRKQENVDRTVATLQGEGLSVTGTVCHVGKAEDRERLVAMAVNL-H   89 (260)
T ss_dssp             TTCEEEESSCSSHHHHHHHHHHH-HTTC-EEEEEESCHHHHHHHHHHHHHTTCCEEEEECCTTCHHHHHHHHHHHHHH-H
T ss_pred             CCCEEEEECCCcHHHHHHHHHHH-HCCC-EEEEEeCCHHHHHHHHHHHHhcCCceEEEEccCCCHHHHHHHHHHHHHH-c
Confidence            4688999987 999999999555 5698 57777787765432 22   234322 222222 222333334333332 2


Q ss_pred             CCceEEEeCCC
Q 017868          254 TGIDVSFDCAG  264 (365)
Q Consensus       254 ~~~d~vid~~g  264 (365)
                      +++|++|.++|
T Consensus        90 g~iD~lv~~Ag  100 (260)
T 2zat_A           90 GGVDILVSNAA  100 (260)
T ss_dssp             SCCCEEEECCC
T ss_pred             CCCCEEEECCC
Confidence            48999999887

>3o38_A Short chain dehydrogenase; tuberculosis, ortholog from A non-pathogenic dehydrogenase, structural genomics; 1.95A {Mycobacterium smegmatis}

Probab=95.72  E-value=0.058  Score=46.17  Aligned_cols=81  Identities=26%  Similarity=0.330  Sum_probs=50.0

Q ss_pred             CCCEEEEEcC-C-HHHHHHHHHHHHHCCCCeEEEEeCChhHHHH-HHHc---CCC--EEEeCCC-CcccHHHHHHHHHHH
Q 017868          181 PETNVLIMGA-G-PIGLVTMLGAPRAFGAPRIVIVDVDDYRLSV-AKEI---GAD--NIVKVST-NLQDIAEEVEKIQKA  251 (365)
Q Consensus       181 ~g~~vlI~G~-g-~~G~~ai~~l~~~~g~~~vi~v~~~~~~~~~-~~~~---g~~--~~~~~~~-~~~~~~~~i~~~~~~  251 (365)
                      .+.++||+|+ | ++|.+++..++ ..|+ .|+.++++.++.+. .+++   +..  ..+..+- +.+++.+.++++.+.
T Consensus        21 ~~k~vlITGasg~GIG~~~a~~l~-~~G~-~V~~~~r~~~~~~~~~~~l~~~~~~~~~~~~~Dl~~~~~v~~~~~~~~~~   98 (266)
T 3o38_A           21 KGKVVLVTAAAGTGIGSTTARRAL-LEGA-DVVISDYHERRLGETRDQLADLGLGRVEAVVCDVTSTEAVDALITQTVEK   98 (266)
T ss_dssp             TTCEEEESSCSSSSHHHHHHHHHH-HTTC-EEEEEESCHHHHHHHHHHHHTTCSSCEEEEECCTTCHHHHHHHHHHHHHH
T ss_pred             CCCEEEEECCCCCchHHHHHHHHH-HCCC-EEEEecCCHHHHHHHHHHHHhcCCCceEEEEeCCCCHHHHHHHHHHHHHH
Confidence            5789999987 6 79999999555 5598 57778888766543 2333   211  2222222 223333444444333


Q ss_pred             hCCCceEEEeCCC
Q 017868          252 MGTGIDVSFDCAG  264 (365)
Q Consensus       252 ~~~~~d~vid~~g  264 (365)
                       .+++|++|.++|
T Consensus        99 -~g~id~li~~Ag  110 (266)
T 3o38_A           99 -AGRLDVLVNNAG  110 (266)
T ss_dssp             -HSCCCEEEECCC
T ss_pred             -hCCCcEEEECCC
Confidence             257999999988

>1vl6_A Malate oxidoreductase; TM0542, NAD-dependent malic enzyme, structural genomics, JCS protein structure initiative, PSI; 2.61A {Thermotoga maritima} SCOP: c.2.1.7 c.58.1.3 PDB: 2hae_A*

Probab=95.71  E-value=0.071  Score=47.92  Aligned_cols=92  Identities=16%  Similarity=0.192  Sum_probs=61.6

Q ss_pred             CCCEEEEEcCCHHHHHHHHHHHHHCCCCeEEEEeCC----hhH---------HHHHHHcCCCEEEeCCCCcccHHHHHHH
Q 017868          181 PETNVLIMGAGPIGLVTMLGAPRAFGAPRIVIVDVD----DYR---------LSVAKEIGADNIVKVSTNLQDIAEEVEK  247 (365)
Q Consensus       181 ~g~~vlI~G~g~~G~~ai~~l~~~~g~~~vi~v~~~----~~~---------~~~~~~~g~~~~~~~~~~~~~~~~~i~~  247 (365)
                      ++.+|+|.|+|..|..+++ ++...|+++++.++++    .+|         .+++++....      ....++.+.+  
T Consensus       191 ~~~kVVv~GAGaAG~~iAk-ll~~~G~~~I~v~Dr~Gli~~~R~~~~L~~~k~~~A~~~~~~------~~~~~L~eav--  261 (388)
T 1vl6_A          191 EEVKVVVNGIGAAGYNIVK-FLLDLGVKNVVAVDRKGILNENDPETCLNEYHLEIARITNPE------RLSGDLETAL--  261 (388)
T ss_dssp             TTCEEEEECCSHHHHHHHH-HHHHHTCCEEEEEETTEECCTTSGGGCSSHHHHHHHHTSCTT------CCCSCHHHHH--
T ss_pred             CCcEEEEECCCHHHHHHHH-HHHhCCCCeEEEEECCCcccCCCcccccCHHHHHHHHhhhcc------CchhhHHHHH--
Confidence            6679999999999999999 6666799899999887    443         4455554321      1223444443  


Q ss_pred             HHHHhCCCceEEEeCCCCHHHHHHHHHhcccCCEEEEEcc
Q 017868          248 IQKAMGTGIDVSFDCAGLNKTMSTALGATCAGGKVCLVGM  287 (365)
Q Consensus       248 ~~~~~~~~~d~vid~~g~~~~~~~~~~~l~~~G~~~~~g~  287 (365)
                            .++|++|.+++........++.|+++..++.++.
T Consensus       262 ------~~ADVlIG~Sap~l~t~emVk~Ma~~pIIfalSN  295 (388)
T 1vl6_A          262 ------EGADFFIGVSRGNILKPEWIKKMSRKPVIFALAN  295 (388)
T ss_dssp             ------TTCSEEEECSCSSCSCHHHHTTSCSSCEEEECCS
T ss_pred             ------ccCCEEEEeCCCCccCHHHHHhcCCCCEEEEcCC
Confidence                  3589999988743223356677887665555443

>1zmt_A Haloalcohol dehalogenase HHEC; halohydrin dehalogenase, epoxide catalysis, enantioselectivity, lyase; HET: RNO; 1.70A {Agrobacterium tumefaciens} SCOP: c.2.1.2 PDB: 1pwz_A 1px0_A* 1pwx_A* 1zo8_A*

Probab=95.71  E-value=0.028  Score=47.84  Aligned_cols=77  Identities=16%  Similarity=0.065  Sum_probs=49.1

Q ss_pred             CEEEEEcC-CHHHHHHHHHHHHHCCCCeEEEEeCChhHHHHH---HHcCCCEEEeCCCCcccHHHHHHHHHHHhCCCceE
Q 017868          183 TNVLIMGA-GPIGLVTMLGAPRAFGAPRIVIVDVDDYRLSVA---KEIGADNIVKVSTNLQDIAEEVEKIQKAMGTGIDV  258 (365)
Q Consensus       183 ~~vlI~G~-g~~G~~ai~~l~~~~g~~~vi~v~~~~~~~~~~---~~~g~~~~~~~~~~~~~~~~~i~~~~~~~~~~~d~  258 (365)
                      +++||+|+ +++|.++++.++ ..|+ .|+.+++++++.+.+   +..+......   +.++..+.+.+..+.. +++|+
T Consensus         2 k~vlVTGas~gIG~~ia~~l~-~~G~-~V~~~~r~~~~~~~~~~l~~~~~~~~~~---d~~~v~~~~~~~~~~~-g~iD~   75 (254)
T 1zmt_A            2 STAIVTNVKHFGGMGSALRLS-EAGH-TVACHDESFKQKDELEAFAETYPQLKPM---SEQEPAELIEAVTSAY-GQVDV   75 (254)
T ss_dssp             CEEEESSTTSTTHHHHHHHHH-HTTC-EEEECCGGGGSHHHHHHHHHHCTTSEEC---CCCSHHHHHHHHHHHH-SCCCE
T ss_pred             eEEEEeCCCchHHHHHHHHHH-HCCC-EEEEEeCCHHHHHHHHHHHhcCCcEEEE---CHHHHHHHHHHHHHHh-CCCCE
Confidence            36899987 999999999554 5699 577777776654433   2334332221   3345555555544433 58999


Q ss_pred             EEeCCCC
Q 017868          259 SFDCAGL  265 (365)
Q Consensus       259 vid~~g~  265 (365)
                      +|.++|.
T Consensus        76 lv~nAg~   82 (254)
T 1zmt_A           76 LVSNDIF   82 (254)
T ss_dssp             EEEECCC
T ss_pred             EEECCCc
Confidence            9998873

>3vtz_A Glucose 1-dehydrogenase; rossmann fold, oxidoreductase, NAD binding; 2.30A {Thermoplasma volcanium}

Probab=95.71  E-value=0.038  Score=47.53  Aligned_cols=78  Identities=26%  Similarity=0.384  Sum_probs=47.8

Q ss_pred             CCCCCEEEEEcC-CHHHHHHHHHHHHHCCCCeEEEEeCChhHHHHHHHcCCCEEEeCCC-CcccHHHHHHHHHHHhCCCc
Q 017868          179 IGPETNVLIMGA-GPIGLVTMLGAPRAFGAPRIVIVDVDDYRLSVAKEIGADNIVKVST-NLQDIAEEVEKIQKAMGTGI  256 (365)
Q Consensus       179 ~~~g~~vlI~G~-g~~G~~ai~~l~~~~g~~~vi~v~~~~~~~~~~~~~g~~~~~~~~~-~~~~~~~~i~~~~~~~~~~~  256 (365)
                      -..++++||+|+ +++|.++++.++ ..|+ .|+.+++++++..     +....+..+- +.++..+.++++.+.. +++
T Consensus        11 ~~~~k~vlVTGas~GIG~aia~~l~-~~G~-~V~~~~r~~~~~~-----~~~~~~~~Dv~~~~~v~~~~~~~~~~~-g~i   82 (269)
T 3vtz_A           11 EFTDKVAIVTGGSSGIGLAVVDALV-RYGA-KVVSVSLDEKSDV-----NVSDHFKIDVTNEEEVKEAVEKTTKKY-GRI   82 (269)
T ss_dssp             TTTTCEEEESSTTSHHHHHHHHHHH-HTTC-EEEEEESCC--CT-----TSSEEEECCTTCHHHHHHHHHHHHHHH-SCC
T ss_pred             CCCCCEEEEeCCCCHHHHHHHHHHH-HCCC-EEEEEeCCchhcc-----CceeEEEecCCCHHHHHHHHHHHHHHc-CCC
Confidence            457889999987 999999999555 5599 5777777665431     1222222222 2233444444443332 589


Q ss_pred             eEEEeCCC
Q 017868          257 DVSFDCAG  264 (365)
Q Consensus       257 d~vid~~g  264 (365)
                      |++|.++|
T Consensus        83 D~lv~nAg   90 (269)
T 3vtz_A           83 DILVNNAG   90 (269)
T ss_dssp             CEEEECCC
T ss_pred             CEEEECCC
Confidence            99999887

>2gn4_A FLAA1 protein, UDP-GLCNAC C6 dehydratase; rossmann fold, TYK triad, SDR, enzyme, NADP, NADPH, lyase; HET: NDP UD1 MES; 1.90A {Helicobacter pylori} PDB: 2gn6_A* 2gn8_A* 2gn9_A* 2gna_A*

Probab=95.71  E-value=0.057  Score=48.24  Aligned_cols=79  Identities=20%  Similarity=0.309  Sum_probs=49.8

Q ss_pred             CCCCEEEEEcC-CHHHHHHHHHHHHHCCCCeEEEEeCChhHHHHH-HHcCCC--EEEeCCCCcccHHHHHHHHHHHhCCC
Q 017868          180 GPETNVLIMGA-GPIGLVTMLGAPRAFGAPRIVIVDVDDYRLSVA-KEIGAD--NIVKVSTNLQDIAEEVEKIQKAMGTG  255 (365)
Q Consensus       180 ~~g~~vlI~G~-g~~G~~ai~~l~~~~g~~~vi~v~~~~~~~~~~-~~~g~~--~~~~~~~~~~~~~~~i~~~~~~~~~~  255 (365)
                      -.+.+|||+|+ |.+|..+++.+++..|...|+++++++.+.+.+ +.+...  ..+..+-  .+. +.+++.    -.+
T Consensus        19 ~~~k~vlVTGatG~iG~~l~~~L~~~~g~~~V~~~~r~~~~~~~~~~~~~~~~v~~~~~Dl--~d~-~~l~~~----~~~   91 (344)
T 2gn4_A           19 LDNQTILITGGTGSFGKCFVRKVLDTTNAKKIIVYSRDELKQSEMAMEFNDPRMRFFIGDV--RDL-ERLNYA----LEG   91 (344)
T ss_dssp             TTTCEEEEETTTSHHHHHHHHHHHHHCCCSEEEEEESCHHHHHHHHHHHCCTTEEEEECCT--TCH-HHHHHH----TTT
T ss_pred             hCCCEEEEECCCcHHHHHHHHHHHhhCCCCEEEEEECChhhHHHHHHHhcCCCEEEEECCC--CCH-HHHHHH----Hhc
Confidence            35789999987 999999999555443875688888887776544 334321  2222222  222 233333    247


Q ss_pred             ceEEEeCCCC
Q 017868          256 IDVSFDCAGL  265 (365)
Q Consensus       256 ~d~vid~~g~  265 (365)
                      +|+||.+++.
T Consensus        92 ~D~Vih~Aa~  101 (344)
T 2gn4_A           92 VDICIHAAAL  101 (344)
T ss_dssp             CSEEEECCCC
T ss_pred             CCEEEECCCC
Confidence            9999999873

>2gdz_A NAD+-dependent 15-hydroxyprostaglandin dehydrogen; dehydrogenase, structural genomics, SH dehydrogenase/reductase, inflammation; HET: NAD; 1.65A {Homo sapiens} SCOP: c.2.1.2

Probab=95.70  E-value=0.08  Score=45.31  Aligned_cols=82  Identities=17%  Similarity=0.217  Sum_probs=49.5

Q ss_pred             CCCEEEEEcC-CHHHHHHHHHHHHHCCCCeEEEEeCChhHHHH-HHHcC-----CC-EEEeCCC-CcccHHHHHHHHHHH
Q 017868          181 PETNVLIMGA-GPIGLVTMLGAPRAFGAPRIVIVDVDDYRLSV-AKEIG-----AD-NIVKVST-NLQDIAEEVEKIQKA  251 (365)
Q Consensus       181 ~g~~vlI~G~-g~~G~~ai~~l~~~~g~~~vi~v~~~~~~~~~-~~~~g-----~~-~~~~~~~-~~~~~~~~i~~~~~~  251 (365)
                      .+.++||+|+ |++|.++++.++ ..|+ .|+++++++++.+. .+++.     .. ..+..+- +.+++...++...+.
T Consensus         6 ~~k~vlVTGas~gIG~~ia~~l~-~~G~-~V~~~~r~~~~~~~~~~~l~~~~~~~~~~~~~~D~~~~~~v~~~~~~~~~~   83 (267)
T 2gdz_A            6 NGKVALVTGAAQGIGRAFAEALL-LKGA-KVALVDWNLEAGVQCKAALHEQFEPQKTLFIQCDVADQQQLRDTFRKVVDH   83 (267)
T ss_dssp             TTCEEEEETTTSHHHHHHHHHHH-HTTC-EEEEEESCHHHHHHHHHHHTTTSCGGGEEEEECCTTSHHHHHHHHHHHHHH
T ss_pred             CCCEEEEECCCCcHHHHHHHHHH-HCCC-EEEEEECCHHHHHHHHHHHHhhcCCCceEEEecCCCCHHHHHHHHHHHHHH
Confidence            4678999987 999999999554 5598 57777787766442 23332     11 1222222 223333344443332


Q ss_pred             hCCCceEEEeCCCC
Q 017868          252 MGTGIDVSFDCAGL  265 (365)
Q Consensus       252 ~~~~~d~vid~~g~  265 (365)
                      . +++|++|.++|.
T Consensus        84 ~-g~id~lv~~Ag~   96 (267)
T 2gdz_A           84 F-GRLDILVNNAGV   96 (267)
T ss_dssp             H-SCCCEEEECCCC
T ss_pred             c-CCCCEEEECCCC
Confidence            2 479999999873

>3sx2_A Putative 3-ketoacyl-(acyl-carrier-protein) reduct; ssgcid, 3-ketoacyl-(acyl-carrier-protein) reductase, mycobac paratuberculosis; HET: NAD; 1.50A {Mycobacterium avium subsp}

Probab=95.70  E-value=0.092  Score=45.23  Aligned_cols=82  Identities=20%  Similarity=0.285  Sum_probs=49.2

Q ss_pred             CCCEEEEEcC-CHHHHHHHHHHHHHCCCCeEEEEeCC------------hhHHH----HHHHcCCCE-EEeCCC-CcccH
Q 017868          181 PETNVLIMGA-GPIGLVTMLGAPRAFGAPRIVIVDVD------------DYRLS----VAKEIGADN-IVKVST-NLQDI  241 (365)
Q Consensus       181 ~g~~vlI~G~-g~~G~~ai~~l~~~~g~~~vi~v~~~------------~~~~~----~~~~~g~~~-~~~~~~-~~~~~  241 (365)
                      .|.++||+|+ +++|.++++.++ ..|+ .|+.++++            .++.+    .++..+... .+..+- +.+++
T Consensus        12 ~gk~vlVTGas~gIG~~ia~~l~-~~G~-~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~D~~~~~~v   89 (278)
T 3sx2_A           12 TGKVAFITGAARGQGRAHAVRLA-ADGA-DIIAVDLCDQIASVPYPLATPEELAATVKLVEDIGSRIVARQADVRDRESL   89 (278)
T ss_dssp             TTCEEEEESTTSHHHHHHHHHHH-HTTC-EEEEEECCSCCTTCSSCCCCHHHHHHHHHHHHHHTCCEEEEECCTTCHHHH
T ss_pred             CCCEEEEECCCChHHHHHHHHHH-HCCC-eEEEEecccccccccccccchHHHHHHHHHHHhcCCeEEEEeCCCCCHHHH
Confidence            5789999987 999999999555 5699 57777665            33332    223344332 222222 22333


Q ss_pred             HHHHHHHHHHhCCCceEEEeCCCC
Q 017868          242 AEEVEKIQKAMGTGIDVSFDCAGL  265 (365)
Q Consensus       242 ~~~i~~~~~~~~~~~d~vid~~g~  265 (365)
                      .+.++++.+.. +++|++|.++|.
T Consensus        90 ~~~~~~~~~~~-g~id~lv~nAg~  112 (278)
T 3sx2_A           90 SAALQAGLDEL-GRLDIVVANAGI  112 (278)
T ss_dssp             HHHHHHHHHHH-CCCCEEEECCCC
T ss_pred             HHHHHHHHHHc-CCCCEEEECCCC
Confidence            34444443332 579999999883

>3uve_A Carveol dehydrogenase ((+)-trans-carveol dehydrog; ssgcid, structural genomics, seattle structural genomics CEN infectious disease; HET: NAD PG4; 1.55A {Mycobacterium avium} SCOP: c.2.1.0 PDB: 3uwr_A*

Probab=95.69  E-value=0.089  Score=45.55  Aligned_cols=81  Identities=19%  Similarity=0.211  Sum_probs=48.2

Q ss_pred             CCCEEEEEcC-CHHHHHHHHHHHHHCCCCeEEEEeCC----------------hhHHHH----HHHcCCCE-EEeCCC-C
Q 017868          181 PETNVLIMGA-GPIGLVTMLGAPRAFGAPRIVIVDVD----------------DYRLSV----AKEIGADN-IVKVST-N  237 (365)
Q Consensus       181 ~g~~vlI~G~-g~~G~~ai~~l~~~~g~~~vi~v~~~----------------~~~~~~----~~~~g~~~-~~~~~~-~  237 (365)
                      .|.++||+|+ +++|.++++.++ ..|+ +|+.++++                +++.+.    ++..+... .+..+- +
T Consensus        10 ~~k~~lVTGas~gIG~aia~~la-~~G~-~V~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~Dv~~   87 (286)
T 3uve_A           10 EGKVAFVTGAARGQGRSHAVRLA-QEGA-DIIAVDICKPIRAGVVDTAIPASTPEDLAETADLVKGHNRRIVTAEVDVRD   87 (286)
T ss_dssp             TTCEEEEESTTSHHHHHHHHHHH-HTTC-EEEEEECCSCSBTTBCCCSSCCCCHHHHHHHHHHHHTTTCCEEEEECCTTC
T ss_pred             CCCEEEEeCCCchHHHHHHHHHH-HCCC-eEEEEeccccccccccccccccCCHHHHHHHHHHHhhcCCceEEEEcCCCC
Confidence            5789999987 999999999555 5599 56777654                343332    22234322 222222 2


Q ss_pred             cccHHHHHHHHHHHhCCCceEEEeCCC
Q 017868          238 LQDIAEEVEKIQKAMGTGIDVSFDCAG  264 (365)
Q Consensus       238 ~~~~~~~i~~~~~~~~~~~d~vid~~g  264 (365)
                      .++....++++.+.. +++|++|.++|
T Consensus        88 ~~~v~~~~~~~~~~~-g~id~lv~nAg  113 (286)
T 3uve_A           88 YDALKAAVDSGVEQL-GRLDIIVANAG  113 (286)
T ss_dssp             HHHHHHHHHHHHHHH-SCCCEEEECCC
T ss_pred             HHHHHHHHHHHHHHh-CCCCEEEECCc
Confidence            233333444443332 48999999887

>3q2i_A Dehydrogenase; rossmann fold, UDP-sugar binding, NAD binding oxidoreductase; HET: NAD HP7; 1.50A {Chromobacterium violaceum} PDB: 3q2k_A*

Probab=95.69  E-value=0.079  Score=47.52  Aligned_cols=129  Identities=15%  Similarity=0.124  Sum_probs=80.1

Q ss_pred             CEEEEEcCCHHHHHHHHHHHHH-CCCCeEEEEeCChhHHH-HHHHcCCCEEEeCCCCcccHHHHHHHHHHHhCCCceEEE
Q 017868          183 TNVLIMGAGPIGLVTMLGAPRA-FGAPRIVIVDVDDYRLS-VAKEIGADNIVKVSTNLQDIAEEVEKIQKAMGTGIDVSF  260 (365)
Q Consensus       183 ~~vlI~G~g~~G~~ai~~l~~~-~g~~~vi~v~~~~~~~~-~~~~~g~~~~~~~~~~~~~~~~~i~~~~~~~~~~~d~vi  260 (365)
                      -+|.|+|+|.+|...+..+.+. -+++.+.+.++++++.+ +++++|+ ...      .++.+.+.      ...+|+|+
T Consensus        14 ~rvgiiG~G~~g~~~~~~l~~~~~~~~lvav~d~~~~~~~~~~~~~~~-~~~------~~~~~ll~------~~~~D~V~   80 (354)
T 3q2i_A           14 IRFALVGCGRIANNHFGALEKHADRAELIDVCDIDPAALKAAVERTGA-RGH------ASLTDMLA------QTDADIVI   80 (354)
T ss_dssp             EEEEEECCSTTHHHHHHHHHHTTTTEEEEEEECSSHHHHHHHHHHHCC-EEE------SCHHHHHH------HCCCSEEE
T ss_pred             ceEEEEcCcHHHHHHHHHHHhCCCCeEEEEEEcCCHHHHHHHHHHcCC-cee------CCHHHHhc------CCCCCEEE
Confidence            4688999999999877745444 36755556788877765 5577886 222      24433332      25799999


Q ss_pred             eCCCCHHHHHHHHHhcccCCEEEEEccCCCCccccch---H----hhhcCcEEE-ee-cccCCcHHHHHHHHHcCCC
Q 017868          261 DCAGLNKTMSTALGATCAGGKVCLVGMGHHEMTVPLT---P----AAVREVDVV-GV-FRYKNTWPLCLELLRSGKI  328 (365)
Q Consensus       261 d~~g~~~~~~~~~~~l~~~G~~~~~g~~~~~~~~~~~---~----~~~~~~~i~-~~-~~~~~~~~~~~~~l~~g~~  328 (365)
                      .|+....+...+..++..+-+ +++.-   +......   .    .-.++..+. +. ..+...++.+.+++++|.+
T Consensus        81 i~tp~~~h~~~~~~al~~gk~-v~~EK---P~a~~~~~~~~l~~~a~~~g~~~~v~~~~r~~p~~~~~k~~i~~g~i  153 (354)
T 3q2i_A           81 LTTPSGLHPTQSIECSEAGFH-VMTEK---PMATRWEDGLEMVKAADKAKKHLFVVKQNRRNATLQLLKRAMQEKRF  153 (354)
T ss_dssp             ECSCGGGHHHHHHHHHHTTCE-EEECS---SSCSSHHHHHHHHHHHHHHTCCEEECCGGGGSHHHHHHHHHHHTTTT
T ss_pred             ECCCcHHHHHHHHHHHHCCCC-EEEeC---CCcCCHHHHHHHHHHHHHhCCeEEEEEcccCCHHHHHHHHHHhcCCC
Confidence            999887777788888876544 44421   1111111   1    122233332 22 2235678888999999888

>1x1t_A D(-)-3-hydroxybutyrate dehydrogenase; NAD, NADH, SDR, short chain dehydrogenase, ketone BODY, beta hydroxybutyrate, oxidoreductase; HET: NAD; 1.52A {Pseudomonas fragi} SCOP: c.2.1.2 PDB: 1wmb_A* 2ztl_A* 2ztv_A* 2ztm_A* 2ztu_A* 2yz7_A 2zea_A* 3eew_A* 3vdq_A* 3vdr_A*

Probab=95.69  E-value=0.059  Score=45.98  Aligned_cols=81  Identities=22%  Similarity=0.276  Sum_probs=48.5

Q ss_pred             CCCEEEEEcC-CHHHHHHHHHHHHHCCCCeEEEEeCChhH-HH-HHHHc----CCCE-EEeCCC-CcccHHHHHHHHHHH
Q 017868          181 PETNVLIMGA-GPIGLVTMLGAPRAFGAPRIVIVDVDDYR-LS-VAKEI----GADN-IVKVST-NLQDIAEEVEKIQKA  251 (365)
Q Consensus       181 ~g~~vlI~G~-g~~G~~ai~~l~~~~g~~~vi~v~~~~~~-~~-~~~~~----g~~~-~~~~~~-~~~~~~~~i~~~~~~  251 (365)
                      ++.++||+|+ |++|.++++.++ ..|+ .|+.+++++++ .+ ..+++    +... .+..+- +.+++...+++..+.
T Consensus         3 ~~k~vlVTGas~gIG~~ia~~l~-~~G~-~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~~D~~~~~~v~~~~~~~~~~   80 (260)
T 1x1t_A            3 KGKVAVVTGSTSGIGLGIATALA-AQGA-DIVLNGFGDAAEIEKVRAGLAAQHGVKVLYDGADLSKGEAVRGLVDNAVRQ   80 (260)
T ss_dssp             TTCEEEETTCSSHHHHHHHHHHH-HTTC-EEEEECCSCHHHHHHHHHHHHHHHTSCEEEECCCTTSHHHHHHHHHHHHHH
T ss_pred             CCCEEEEeCCCcHHHHHHHHHHH-HcCC-EEEEEeCCcchHHHHHHHHHHhccCCcEEEEECCCCCHHHHHHHHHHHHHh
Confidence            4678999987 999999999555 5699 57777776655 33 22332    4332 222222 222333334433332


Q ss_pred             hCCCceEEEeCCC
Q 017868          252 MGTGIDVSFDCAG  264 (365)
Q Consensus       252 ~~~~~d~vid~~g  264 (365)
                      . +++|++|.++|
T Consensus        81 ~-g~iD~lv~~Ag   92 (260)
T 1x1t_A           81 M-GRIDILVNNAG   92 (260)
T ss_dssp             H-SCCSEEEECCC
T ss_pred             c-CCCCEEEECCC
Confidence            2 47999999887

>4fc7_A Peroxisomal 2,4-dienoyl-COA reductase; SDR/rossmann fold, peroxisomal beta-oxidation, oxidoreductas; HET: NAP COA; 1.84A {Homo sapiens} PDB: 4fc6_A*

Probab=95.69  E-value=0.053  Score=46.79  Aligned_cols=81  Identities=20%  Similarity=0.266  Sum_probs=50.4

Q ss_pred             CCCEEEEEcC-CHHHHHHHHHHHHHCCCCeEEEEeCChhHHH-HHHH----cCCCE-EEeCCC-CcccHHHHHHHHHHHh
Q 017868          181 PETNVLIMGA-GPIGLVTMLGAPRAFGAPRIVIVDVDDYRLS-VAKE----IGADN-IVKVST-NLQDIAEEVEKIQKAM  252 (365)
Q Consensus       181 ~g~~vlI~G~-g~~G~~ai~~l~~~~g~~~vi~v~~~~~~~~-~~~~----~g~~~-~~~~~~-~~~~~~~~i~~~~~~~  252 (365)
                      .|.++||+|+ +++|.++++.++ ..|+ +|+.++++.++.+ .+++    .+... .+..+- +.++..+.++++.+..
T Consensus        26 ~~k~~lVTGas~GIG~aia~~l~-~~G~-~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~Dv~~~~~v~~~~~~~~~~~  103 (277)
T 4fc7_A           26 RDKVAFITGGGSGIGFRIAEIFM-RHGC-HTVIASRSLPRVLTAARKLAGATGRRCLPLSMDVRAPPAVMAAVDQALKEF  103 (277)
T ss_dssp             TTCEEEEETTTSHHHHHHHHHHH-TTTC-EEEEEESCHHHHHHHHHHHHHHHSSCEEEEECCTTCHHHHHHHHHHHHHHH
T ss_pred             CCCEEEEeCCCchHHHHHHHHHH-HCCC-EEEEEeCCHHHHHHHHHHHHHhcCCcEEEEEcCCCCHHHHHHHHHHHHHHc
Confidence            5789999987 999999999555 5699 6777778776543 2222    24322 222222 2233334444443332


Q ss_pred             CCCceEEEeCCC
Q 017868          253 GTGIDVSFDCAG  264 (365)
Q Consensus       253 ~~~~d~vid~~g  264 (365)
                       +++|++|.++|
T Consensus       104 -g~id~lv~nAg  114 (277)
T 4fc7_A          104 -GRIDILINCAA  114 (277)
T ss_dssp             -SCCCEEEECCC
T ss_pred             -CCCCEEEECCc
Confidence             58999999988

>4h15_A Short chain alcohol dehydrogenase-related dehydro; structural genomics, PSI-biology, nysgrc; HET: MSE; 1.45A {Sinorhizobium meliloti} PDB: 4h16_A*

Probab=95.69  E-value=0.038  Score=47.31  Aligned_cols=76  Identities=18%  Similarity=0.177  Sum_probs=46.2

Q ss_pred             CCCEEEEEcC-CHHHHHHHHHHHHHCCCCeEEEEeCChhHHHHHHHcCCCEEEeCC-CCcccHHHHHHHHHHHhCCCceE
Q 017868          181 PETNVLIMGA-GPIGLVTMLGAPRAFGAPRIVIVDVDDYRLSVAKEIGADNIVKVS-TNLQDIAEEVEKIQKAMGTGIDV  258 (365)
Q Consensus       181 ~g~~vlI~G~-g~~G~~ai~~l~~~~g~~~vi~v~~~~~~~~~~~~~g~~~~~~~~-~~~~~~~~~i~~~~~~~~~~~d~  258 (365)
                      +|+++||+|+ +++|.++++.+ ...|+ +|+.++++++.     .+.....+..+ .+.++....+++..+. -+++|+
T Consensus        10 ~GK~alVTGas~GIG~aia~~l-a~~Ga-~V~~~~r~~~~-----~~~~~~~~~~Dv~~~~~v~~~~~~~~~~-~G~iDi   81 (261)
T 4h15_A           10 RGKRALITAGTKGAGAATVSLF-LELGA-QVLTTARARPE-----GLPEELFVEADLTTKEGCAIVAEATRQR-LGGVDV   81 (261)
T ss_dssp             TTCEEEESCCSSHHHHHHHHHH-HHTTC-EEEEEESSCCT-----TSCTTTEEECCTTSHHHHHHHHHHHHHH-TSSCSE
T ss_pred             CCCEEEEeccCcHHHHHHHHHH-HHcCC-EEEEEECCchh-----CCCcEEEEEcCCCCHHHHHHHHHHHHHH-cCCCCE
Confidence            6889999987 99999999945 46699 56667665432     11111112222 2223444444444433 358999


Q ss_pred             EEeCCC
Q 017868          259 SFDCAG  264 (365)
Q Consensus       259 vid~~g  264 (365)
                      +++++|
T Consensus        82 lVnnAG   87 (261)
T 4h15_A           82 IVHMLG   87 (261)
T ss_dssp             EEECCC
T ss_pred             EEECCC
Confidence            999876

>1npy_A Hypothetical shikimate 5-dehydrogenase-like protein HI0607; structural genomics, PSI, protein structure initiative; 1.75A {Haemophilus influenzae} SCOP: c.2.1.7 c.58.1.5

Probab=95.68  E-value=0.059  Score=46.37  Aligned_cols=114  Identities=12%  Similarity=0.054  Sum_probs=68.9

Q ss_pred             HHhcCCCCCCEEEEEcCCHHHHHHHHHHHHHCCCCeEEEEeCChhHH-HHHHHcCCCEEEeCCCCcccHHHHHHHHHHHh
Q 017868          174 CRRANIGPETNVLIMGAGPIGLVTMLGAPRAFGAPRIVIVDVDDYRL-SVAKEIGADNIVKVSTNLQDIAEEVEKIQKAM  252 (365)
Q Consensus       174 ~~~~~~~~g~~vlI~G~g~~G~~ai~~l~~~~g~~~vi~v~~~~~~~-~~~~~~g~~~~~~~~~~~~~~~~~i~~~~~~~  252 (365)
                      ++...+..+.++||.|+|+.+.+++. .+...|++.+.++.++.+|. +++++++...  .  .   +.    .      
T Consensus       111 l~~~~~~~~~~vlvlGaGgaarav~~-~L~~~G~~~i~v~nRt~~ka~~la~~~~~~~--~--~---~~----~------  172 (271)
T 1npy_A          111 IEKYHLNKNAKVIVHGSGGMAKAVVA-AFKNSGFEKLKIYARNVKTGQYLAALYGYAY--I--N---SL----E------  172 (271)
T ss_dssp             HHHTTCCTTSCEEEECSSTTHHHHHH-HHHHTTCCCEEEECSCHHHHHHHHHHHTCEE--E--S---CC----T------
T ss_pred             HHHhCCCCCCEEEEECCcHHHHHHHH-HHHHCCCCEEEEEeCCHHHHHHHHHHcCCcc--c--h---hh----h------
Confidence            34334446789999999999999998 55677987788888887775 4667777521  1  1   10    0      


Q ss_pred             CCCceEEEeCCCCHHHH-------HHHHHhcccCCEEEEEccCCCCccccchHhhhcCcEE
Q 017868          253 GTGIDVSFDCAGLNKTM-------STALGATCAGGKVCLVGMGHHEMTVPLTPAAVREVDV  306 (365)
Q Consensus       253 ~~~~d~vid~~g~~~~~-------~~~~~~l~~~G~~~~~g~~~~~~~~~~~~~~~~~~~i  306 (365)
                      -..+|+||+++......       ......+.++..++.+.... ..+......-.++...
T Consensus       173 ~~~~DivInaTp~gm~~~~~~~~~~~~~~~l~~~~~v~DlvY~P-~~T~ll~~A~~~G~~~  232 (271)
T 1npy_A          173 NQQADILVNVTSIGMKGGKEEMDLAFPKAFIDNASVAFDVVAMP-VETPFIRYAQARGKQT  232 (271)
T ss_dssp             TCCCSEEEECSSTTCTTSTTTTSCSSCHHHHHHCSEEEECCCSS-SSCHHHHHHHHTTCEE
T ss_pred             cccCCEEEECCCCCccCccccCCCCCCHHHcCCCCEEEEeecCC-CCCHHHHHHHHCCCEE
Confidence            14699999998754210       11124555666666654422 2233333444455544

>3ou2_A SAM-dependent methyltransferase; O-methyltransferase, SAH; HET: SAH; 1.50A {Streptomyces luridus} PDB: 3ou6_A* 3ou7_A*

Probab=95.68  E-value=0.039  Score=45.38  Aligned_cols=99  Identities=20%  Similarity=0.155  Sum_probs=68.0

Q ss_pred             cCCCCCCEEEEEcCCHHHHHHHHHHHHHCCCCeEEEEeCChhHHHHHHHcCCCEEEeCCCCcccHHHHHHHHHHHhCCCc
Q 017868          177 ANIGPETNVLIMGAGPIGLVTMLGAPRAFGAPRIVIVDVDDYRLSVAKEIGADNIVKVSTNLQDIAEEVEKIQKAMGTGI  256 (365)
Q Consensus       177 ~~~~~g~~vlI~G~g~~G~~ai~~l~~~~g~~~vi~v~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~i~~~~~~~~~~~  256 (365)
                      ..+.++.+||-.|+|. |..+.. +++. |. .+++++.+++..+.+++.+...+.....+..++         .....+
T Consensus        42 ~~~~~~~~vLdiG~G~-G~~~~~-l~~~-~~-~v~~~D~s~~~~~~a~~~~~~~~~~~~~d~~~~---------~~~~~~  108 (218)
T 3ou2_A           42 RAGNIRGDVLELASGT-GYWTRH-LSGL-AD-RVTALDGSAEMIAEAGRHGLDNVEFRQQDLFDW---------TPDRQW  108 (218)
T ss_dssp             TTTTSCSEEEEESCTT-SHHHHH-HHHH-SS-EEEEEESCHHHHHHHGGGCCTTEEEEECCTTSC---------CCSSCE
T ss_pred             hcCCCCCeEEEECCCC-CHHHHH-HHhc-CC-eEEEEeCCHHHHHHHHhcCCCCeEEEecccccC---------CCCCce
Confidence            4477888999998865 666666 6655 76 799999999999988886643322221222221         125789


Q ss_pred             eEEEeCCC-----C---HHHHHHHHHhcccCCEEEEEccC
Q 017868          257 DVSFDCAG-----L---NKTMSTALGATCAGGKVCLVGMG  288 (365)
Q Consensus       257 d~vid~~g-----~---~~~~~~~~~~l~~~G~~~~~g~~  288 (365)
                      |+|+....     .   ...+..+.+.|+++|.+++....
T Consensus       109 D~v~~~~~l~~~~~~~~~~~l~~~~~~L~pgG~l~~~~~~  148 (218)
T 3ou2_A          109 DAVFFAHWLAHVPDDRFEAFWESVRSAVAPGGVVEFVDVT  148 (218)
T ss_dssp             EEEEEESCGGGSCHHHHHHHHHHHHHHEEEEEEEEEEEEC
T ss_pred             eEEEEechhhcCCHHHHHHHHHHHHHHcCCCeEEEEEeCC
Confidence            99997432     1   34667888999999999887543

>3pgx_A Carveol dehydrogenase; structural genomics, seattle structural genomics center for infectious disease, ssgcid; HET: NAD; 1.85A {Mycobacterium avium} SCOP: c.2.1.0

Probab=95.68  E-value=0.094  Score=45.25  Aligned_cols=82  Identities=21%  Similarity=0.197  Sum_probs=49.0

Q ss_pred             CCCCEEEEEcC-CHHHHHHHHHHHHHCCCCeEEEEeC-------------ChhHHHH----HHHcCCCE-EEeCCC-Ccc
Q 017868          180 GPETNVLIMGA-GPIGLVTMLGAPRAFGAPRIVIVDV-------------DDYRLSV----AKEIGADN-IVKVST-NLQ  239 (365)
Q Consensus       180 ~~g~~vlI~G~-g~~G~~ai~~l~~~~g~~~vi~v~~-------------~~~~~~~----~~~~g~~~-~~~~~~-~~~  239 (365)
                      -.|+++||+|+ +++|.++++.++ ..|+ +|+.+++             ++++.+.    +++.+... .+..+- +.+
T Consensus        13 l~gk~~lVTGas~gIG~a~a~~la-~~G~-~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~Dv~~~~   90 (280)
T 3pgx_A           13 LQGRVAFITGAARGQGRSHAVRLA-AEGA-DIIACDICAPVSASVTYAPASPEDLDETARLVEDQGRKALTRVLDVRDDA   90 (280)
T ss_dssp             TTTCEEEEESTTSHHHHHHHHHHH-HTTC-EEEEEECCSCCCTTCCSCCCCHHHHHHHHHHHHTTTCCEEEEECCTTCHH
T ss_pred             cCCCEEEEECCCcHHHHHHHHHHH-HCCC-EEEEEeccccccccccccccCHHHHHHHHHHHHhcCCeEEEEEcCCCCHH
Confidence            45789999987 999999999555 5599 5666665             4444332    23334332 222222 223


Q ss_pred             cHHHHHHHHHHHhCCCceEEEeCCC
Q 017868          240 DIAEEVEKIQKAMGTGIDVSFDCAG  264 (365)
Q Consensus       240 ~~~~~i~~~~~~~~~~~d~vid~~g  264 (365)
                      +..+.+++..+.. +++|++|.++|
T Consensus        91 ~v~~~~~~~~~~~-g~id~lvnnAg  114 (280)
T 3pgx_A           91 ALRELVADGMEQF-GRLDVVVANAG  114 (280)
T ss_dssp             HHHHHHHHHHHHH-CCCCEEEECCC
T ss_pred             HHHHHHHHHHHHc-CCCCEEEECCC
Confidence            3334444443332 58999999887

>1yxm_A Pecra, peroxisomal trans 2-enoyl COA reductase; perioxisomes, fatty acid synthesis, short-chain dehydrogenases/reductases, structural genomics; HET: ADE; 1.90A {Homo sapiens} SCOP: c.2.1.2

Probab=95.67  E-value=0.1  Score=45.57  Aligned_cols=81  Identities=19%  Similarity=0.257  Sum_probs=48.9

Q ss_pred             CCCEEEEEcC-CHHHHHHHHHHHHHCCCCeEEEEeCChhHHHHH-HHc--------CCCE-EEeCCC-CcccHHHHHHHH
Q 017868          181 PETNVLIMGA-GPIGLVTMLGAPRAFGAPRIVIVDVDDYRLSVA-KEI--------GADN-IVKVST-NLQDIAEEVEKI  248 (365)
Q Consensus       181 ~g~~vlI~G~-g~~G~~ai~~l~~~~g~~~vi~v~~~~~~~~~~-~~~--------g~~~-~~~~~~-~~~~~~~~i~~~  248 (365)
                      .+.++||+|+ |++|.+++..++ ..|+ .|+.++++.++.+.+ +++        +... .+..+- +.+++...++++
T Consensus        17 ~~k~vlVTGasggIG~~la~~l~-~~G~-~V~~~~r~~~~~~~~~~~l~~~~~~~~~~~~~~~~~D~~~~~~v~~~~~~~   94 (303)
T 1yxm_A           17 QGQVAIVTGGATGIGKAIVKELL-ELGS-NVVIASRKLERLKSAADELQANLPPTKQARVIPIQCNIRNEEEVNNLVKST   94 (303)
T ss_dssp             TTCEEEEETTTSHHHHHHHHHHH-HTTC-EEEEEESCHHHHHHHHHHHHHTSCTTCCCCEEEEECCTTCHHHHHHHHHHH
T ss_pred             CCCEEEEECCCcHHHHHHHHHHH-HCCC-EEEEEeCCHHHHHHHHHHHHhhccccCCccEEEEecCCCCHHHHHHHHHHH
Confidence            4678999987 999999999454 5698 577777877665432 222        2221 222222 222333334433


Q ss_pred             HHHhCCCceEEEeCCC
Q 017868          249 QKAMGTGIDVSFDCAG  264 (365)
Q Consensus       249 ~~~~~~~~d~vid~~g  264 (365)
                      .+.. +++|++|.++|
T Consensus        95 ~~~~-g~id~li~~Ag  109 (303)
T 1yxm_A           95 LDTF-GKINFLVNNGG  109 (303)
T ss_dssp             HHHH-SCCCEEEECCC
T ss_pred             HHHc-CCCCEEEECCC
Confidence            3322 47999999987

>4da9_A Short-chain dehydrogenase/reductase; structural genomics, protein structure initiative, PSI-biology; 2.50A {Sinorhizobium meliloti}

Probab=95.67  E-value=0.085  Score=45.61  Aligned_cols=83  Identities=20%  Similarity=0.269  Sum_probs=50.2

Q ss_pred             CCCCEEEEEcC-CHHHHHHHHHHHHHCCCCeEEEEe-CChhHHHH----HHHcCCCE-EEeCCC-CcccHHHHHHHHHHH
Q 017868          180 GPETNVLIMGA-GPIGLVTMLGAPRAFGAPRIVIVD-VDDYRLSV----AKEIGADN-IVKVST-NLQDIAEEVEKIQKA  251 (365)
Q Consensus       180 ~~g~~vlI~G~-g~~G~~ai~~l~~~~g~~~vi~v~-~~~~~~~~----~~~~g~~~-~~~~~~-~~~~~~~~i~~~~~~  251 (365)
                      -.+.++||+|+ +++|.++++.++ ..|++ |+.++ +++++.+.    ++..+... .+..+- +.++..+.++++.+.
T Consensus        27 ~~~k~~lVTGas~GIG~aia~~la-~~G~~-V~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~Dv~d~~~v~~~~~~~~~~  104 (280)
T 4da9_A           27 KARPVAIVTGGRRGIGLGIARALA-ASGFD-IAITGIGDAEGVAPVIAELSGLGARVIFLRADLADLSSHQATVDAVVAE  104 (280)
T ss_dssp             CCCCEEEEETTTSHHHHHHHHHHH-HTTCE-EEEEESCCHHHHHHHHHHHHHTTCCEEEEECCTTSGGGHHHHHHHHHHH
T ss_pred             cCCCEEEEecCCCHHHHHHHHHHH-HCCCe-EEEEeCCCHHHHHHHHHHHHhcCCcEEEEEecCCCHHHHHHHHHHHHHH
Confidence            35788999987 999999999554 56994 66665 35554332    23334322 222222 334455555555443


Q ss_pred             hCCCceEEEeCCCC
Q 017868          252 MGTGIDVSFDCAGL  265 (365)
Q Consensus       252 ~~~~~d~vid~~g~  265 (365)
                      . +++|++|.++|.
T Consensus       105 ~-g~iD~lvnnAg~  117 (280)
T 4da9_A          105 F-GRIDCLVNNAGI  117 (280)
T ss_dssp             H-SCCCEEEEECC-
T ss_pred             c-CCCCEEEECCCc
Confidence            3 589999998885

>2bd0_A Sepiapterin reductase; oxidoreductase; HET: NAP BIO; 1.70A {Chlorobium tepidum} SCOP: c.2.1.2

Probab=95.66  E-value=0.085  Score=44.33  Aligned_cols=81  Identities=23%  Similarity=0.242  Sum_probs=48.9

Q ss_pred             CCEEEEEcC-CHHHHHHHHHHHHHCCCC------eEEEEeCChhHHHHH-HHc---CCC-EEEeCCCC-cccHHHHHHHH
Q 017868          182 ETNVLIMGA-GPIGLVTMLGAPRAFGAP------RIVIVDVDDYRLSVA-KEI---GAD-NIVKVSTN-LQDIAEEVEKI  248 (365)
Q Consensus       182 g~~vlI~G~-g~~G~~ai~~l~~~~g~~------~vi~v~~~~~~~~~~-~~~---g~~-~~~~~~~~-~~~~~~~i~~~  248 (365)
                      +.++||+|+ |++|.++++.+++ .|+.      .|+.+++++++.+.+ +++   +.. ..+..+-. .+++...++++
T Consensus         2 ~k~vlITGasggiG~~la~~l~~-~G~~~~~~~~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~D~~~~~~v~~~~~~~   80 (244)
T 2bd0_A            2 KHILLITGAGKGIGRAIALEFAR-AARHHPDFEPVLVLSSRTAADLEKISLECRAEGALTDTITADISDMADVRRLTTHI   80 (244)
T ss_dssp             CEEEEEETTTSHHHHHHHHHHHH-HTTTCTTCCEEEEEEESCHHHHHHHHHHHHTTTCEEEEEECCTTSHHHHHHHHHHH
T ss_pred             CCEEEEECCCChHHHHHHHHHHH-hcCcccccceEEEEEeCCHHHHHHHHHHHHccCCeeeEEEecCCCHHHHHHHHHHH
Confidence            467999987 9999999995655 4873      577777877665433 222   322 12222222 22333334433


Q ss_pred             HHHhCCCceEEEeCCC
Q 017868          249 QKAMGTGIDVSFDCAG  264 (365)
Q Consensus       249 ~~~~~~~~d~vid~~g  264 (365)
                      .+. .+++|++|.++|
T Consensus        81 ~~~-~g~id~li~~Ag   95 (244)
T 2bd0_A           81 VER-YGHIDCLVNNAG   95 (244)
T ss_dssp             HHH-TSCCSEEEECCC
T ss_pred             HHh-CCCCCEEEEcCC
Confidence            332 357999999887

>3u0b_A Oxidoreductase, short chain dehydrogenase/reducta protein; structural genomics, ssgcid; 1.70A {Mycobacterium smegmatis} PDB: 3lls_A 3v1t_C 3v1u_A* 4fw8_A* 3q6i_A* 3m1l_A

Probab=95.66  E-value=0.058  Score=50.26  Aligned_cols=82  Identities=22%  Similarity=0.317  Sum_probs=52.2

Q ss_pred             CCCEEEEEcC-CHHHHHHHHHHHHHCCCCeEEEEeCChhH---HHHHHHcCCCEEEeCC-CCcccHHHHHHHHHHHhCCC
Q 017868          181 PETNVLIMGA-GPIGLVTMLGAPRAFGAPRIVIVDVDDYR---LSVAKEIGADNIVKVS-TNLQDIAEEVEKIQKAMGTG  255 (365)
Q Consensus       181 ~g~~vlI~G~-g~~G~~ai~~l~~~~g~~~vi~v~~~~~~---~~~~~~~g~~~~~~~~-~~~~~~~~~i~~~~~~~~~~  255 (365)
                      ++.++||+|+ +++|.++++.++ ..|+ +++.+++++..   .+..++++... +..+ .+.++....+.++.+..+..
T Consensus       212 ~gk~~LVTGgsgGIG~aiA~~La-~~Ga-~Vvl~~r~~~~~~l~~~~~~~~~~~-~~~Dvtd~~~v~~~~~~~~~~~g~~  288 (454)
T 3u0b_A          212 DGKVAVVTGAARGIGATIAEVFA-RDGA-TVVAIDVDGAAEDLKRVADKVGGTA-LTLDVTADDAVDKITAHVTEHHGGK  288 (454)
T ss_dssp             TTCEEEESSCSSHHHHHHHHHHH-HTTC-EEEEEECGGGHHHHHHHHHHHTCEE-EECCTTSTTHHHHHHHHHHHHSTTC
T ss_pred             CCCEEEEeCCchHHHHHHHHHHH-HCCC-EEEEEeCCccHHHHHHHHHHcCCeE-EEEecCCHHHHHHHHHHHHHHcCCC
Confidence            5778999986 999999999666 4599 57777665432   23445566543 2222 23344444555554444445


Q ss_pred             ceEEEeCCCC
Q 017868          256 IDVSFDCAGL  265 (365)
Q Consensus       256 ~d~vid~~g~  265 (365)
                      +|++|.+.|.
T Consensus       289 id~lV~nAGv  298 (454)
T 3u0b_A          289 VDILVNNAGI  298 (454)
T ss_dssp             CSEEEECCCC
T ss_pred             ceEEEECCcc
Confidence            9999998873

>2q2v_A Beta-D-hydroxybutyrate dehydrogenase; SDR, oxidoreductase; HET: NAD; 1.90A {Pseudomonas putida} PDB: 2q2q_A* 2q2w_A

Probab=95.65  E-value=0.051  Score=46.21  Aligned_cols=81  Identities=21%  Similarity=0.298  Sum_probs=47.6

Q ss_pred             CCCEEEEEcC-CHHHHHHHHHHHHHCCCCeEEEEeCChhH--HHHHHHcCCCEE-EeCCC-CcccHHHHHHHHHHHhCCC
Q 017868          181 PETNVLIMGA-GPIGLVTMLGAPRAFGAPRIVIVDVDDYR--LSVAKEIGADNI-VKVST-NLQDIAEEVEKIQKAMGTG  255 (365)
Q Consensus       181 ~g~~vlI~G~-g~~G~~ai~~l~~~~g~~~vi~v~~~~~~--~~~~~~~g~~~~-~~~~~-~~~~~~~~i~~~~~~~~~~  255 (365)
                      .+.++||+|+ |++|.++++.++ ..|+ .|+.++++++.  .+.+++.+.... +..+- +.+++...+++..+.. ++
T Consensus         3 ~~k~vlVTGas~giG~~ia~~l~-~~G~-~V~~~~r~~~~~~~~~l~~~~~~~~~~~~D~~~~~~v~~~~~~~~~~~-g~   79 (255)
T 2q2v_A            3 KGKTALVTGSTSGIGLGIAQVLA-RAGA-NIVLNGFGDPAPALAEIARHGVKAVHHPADLSDVAQIEALFALAEREF-GG   79 (255)
T ss_dssp             TTCEEEESSCSSHHHHHHHHHHH-HTTC-EEEEECSSCCHHHHHHHHTTSCCEEEECCCTTSHHHHHHHHHHHHHHH-SS
T ss_pred             CCCEEEEeCCCcHHHHHHHHHHH-HCCC-EEEEEeCCchHHHHHHHHhcCCceEEEeCCCCCHHHHHHHHHHHHHHc-CC
Confidence            4678999987 999999999554 5698 56777666541  122233343322 22221 2233333444333322 48


Q ss_pred             ceEEEeCCC
Q 017868          256 IDVSFDCAG  264 (365)
Q Consensus       256 ~d~vid~~g  264 (365)
                      +|++|.++|
T Consensus        80 id~lv~~Ag   88 (255)
T 2q2v_A           80 VDILVNNAG   88 (255)
T ss_dssp             CSEEEECCC
T ss_pred             CCEEEECCC
Confidence            999999887

>1nkv_A Hypothetical protein YJHP; structural genomics, PSI, protein structure initiative, northeast structural genomics consortium, NESG; 2.90A {Escherichia coli} SCOP: c.66.1.21

Probab=95.65  E-value=0.12  Score=43.64  Aligned_cols=101  Identities=18%  Similarity=0.215  Sum_probs=66.3

Q ss_pred             HHhcCCCCCCEEEEEcCCHHHHHHHHHHHHHCCCCeEEEEeCChhHHHHHHH----cCCC-EEEeCCCCcccHHHHHHHH
Q 017868          174 CRRANIGPETNVLIMGAGPIGLVTMLGAPRAFGAPRIVIVDVDDYRLSVAKE----IGAD-NIVKVSTNLQDIAEEVEKI  248 (365)
Q Consensus       174 ~~~~~~~~g~~vlI~G~g~~G~~ai~~l~~~~g~~~vi~v~~~~~~~~~~~~----~g~~-~~~~~~~~~~~~~~~i~~~  248 (365)
                      +....+.++.+||-.|+|. |..+.. +++..+. .+++++.+++..+.+++    .|.. .+.....+..++.      
T Consensus        29 ~~~~~~~~~~~VLDiGcG~-G~~~~~-la~~~~~-~v~gvD~s~~~l~~a~~~~~~~~~~~~v~~~~~d~~~~~------   99 (256)
T 1nkv_A           29 GRVLRMKPGTRILDLGSGS-GEMLCT-WARDHGI-TGTGIDMSSLFTAQAKRRAEELGVSERVHFIHNDAAGYV------   99 (256)
T ss_dssp             HHHTCCCTTCEEEEETCTT-CHHHHH-HHHHTCC-EEEEEESCHHHHHHHHHHHHHTTCTTTEEEEESCCTTCC------
T ss_pred             HHhcCCCCCCEEEEECCCC-CHHHHH-HHHhcCC-eEEEEeCCHHHHHHHHHHHHhcCCCcceEEEECChHhCC------
Confidence            3556788999999999865 777777 7777677 68999999887666543    3432 1111111111110      


Q ss_pred             HHHhCCCceEEEeCC------CCHHHHHHHHHhcccCCEEEEEc
Q 017868          249 QKAMGTGIDVSFDCA------GLNKTMSTALGATCAGGKVCLVG  286 (365)
Q Consensus       249 ~~~~~~~~d~vid~~------g~~~~~~~~~~~l~~~G~~~~~g  286 (365)
                         ....+|+|+...      .....+..+.++|+++|.+++..
T Consensus       100 ---~~~~fD~V~~~~~~~~~~~~~~~l~~~~r~LkpgG~l~~~~  140 (256)
T 1nkv_A          100 ---ANEKCDVAACVGATWIAGGFAGAEELLAQSLKPGGIMLIGE  140 (256)
T ss_dssp             ---CSSCEEEEEEESCGGGTSSSHHHHHHHTTSEEEEEEEEEEE
T ss_pred             ---cCCCCCEEEECCChHhcCCHHHHHHHHHHHcCCCeEEEEec
Confidence               136799998621      23456778889999999988764

>2pd4_A Enoyl-[acyl-carrier-protein] reductase [NADH]; antibacterial target, type II fatty acid biosynthesis, enoyl-ACP-reductase, FABI; HET: NAD DCN; 2.30A {Helicobacter pylori} SCOP: c.2.1.2 PDB: 2pd3_A*

Probab=95.65  E-value=0.1  Score=44.81  Aligned_cols=81  Identities=14%  Similarity=0.215  Sum_probs=47.9

Q ss_pred             CCCEEEEEcC---CHHHHHHHHHHHHHCCCCeEEEEeCChh---HHH-HHHHcCCCEEEeCCCCc-ccHHHHHHHHHHHh
Q 017868          181 PETNVLIMGA---GPIGLVTMLGAPRAFGAPRIVIVDVDDY---RLS-VAKEIGADNIVKVSTNL-QDIAEEVEKIQKAM  252 (365)
Q Consensus       181 ~g~~vlI~G~---g~~G~~ai~~l~~~~g~~~vi~v~~~~~---~~~-~~~~~g~~~~~~~~~~~-~~~~~~i~~~~~~~  252 (365)
                      .+.++||+|+   |++|.++++.++ ..|+ .|+.++++++   ..+ +.+..+....+..+-.+ ++....++++.+. 
T Consensus         5 ~~k~vlVTGas~~~gIG~~~a~~l~-~~G~-~V~~~~r~~~~~~~~~~l~~~~~~~~~~~~D~~~~~~v~~~~~~~~~~-   81 (275)
T 2pd4_A            5 KGKKGLIVGVANNKSIAYGIAQSCF-NQGA-TLAFTYLNESLEKRVRPIAQELNSPYVYELDVSKEEHFKSLYNSVKKD-   81 (275)
T ss_dssp             TTCEEEEECCCSTTSHHHHHHHHHH-TTTC-EEEEEESSTTTHHHHHHHHHHTTCCCEEECCTTCHHHHHHHHHHHHHH-
T ss_pred             CCCEEEEECCCCCCcHHHHHHHHHH-HCCC-EEEEEeCCHHHHHHHHHHHHhcCCcEEEEcCCCCHHHHHHHHHHHHHH-
Confidence            4678999985   699999999554 5598 5677766654   222 22334432233332222 2333333333332 


Q ss_pred             CCCceEEEeCCC
Q 017868          253 GTGIDVSFDCAG  264 (365)
Q Consensus       253 ~~~~d~vid~~g  264 (365)
                      -+++|++|.++|
T Consensus        82 ~g~id~lv~nAg   93 (275)
T 2pd4_A           82 LGSLDFIVHSVA   93 (275)
T ss_dssp             TSCEEEEEECCC
T ss_pred             cCCCCEEEECCc
Confidence            358999999887

>1l3i_A Precorrin-6Y methyltransferase/putative decarboxylase; structural genomics, beta barrel, rossmann fold, tetramer; HET: SAH; 1.95A {Methanothermobacterthermautotrophicus} SCOP: c.66.1.22 PDB: 1kxz_A 1l3b_A 1f38_A 1l3c_A*

Probab=95.64  E-value=0.1  Score=41.64  Aligned_cols=101  Identities=20%  Similarity=0.256  Sum_probs=66.2

Q ss_pred             HHhcCCCCCCEEEEEcCCHHHHHHHHHHHHHCCCCeEEEEeCChhHHHHHHH----cCC-CEEEeCCCCcccHHHHHHHH
Q 017868          174 CRRANIGPETNVLIMGAGPIGLVTMLGAPRAFGAPRIVIVDVDDYRLSVAKE----IGA-DNIVKVSTNLQDIAEEVEKI  248 (365)
Q Consensus       174 ~~~~~~~~g~~vlI~G~g~~G~~ai~~l~~~~g~~~vi~v~~~~~~~~~~~~----~g~-~~~~~~~~~~~~~~~~i~~~  248 (365)
                      +....+.++++||-.|+|. |..+.. +++..  ..+++++.+++..+.+++    .+. ..+....   .++.+.+.  
T Consensus        26 ~~~~~~~~~~~vldiG~G~-G~~~~~-l~~~~--~~v~~~D~~~~~~~~a~~~~~~~~~~~~~~~~~---~d~~~~~~--   96 (192)
T 1l3i_A           26 MCLAEPGKNDVAVDVGCGT-GGVTLE-LAGRV--RRVYAIDRNPEAISTTEMNLQRHGLGDNVTLME---GDAPEALC--   96 (192)
T ss_dssp             HHHHCCCTTCEEEEESCTT-SHHHHH-HHTTS--SEEEEEESCHHHHHHHHHHHHHTTCCTTEEEEE---SCHHHHHT--
T ss_pred             HHhcCCCCCCEEEEECCCC-CHHHHH-HHHhc--CEEEEEECCHHHHHHHHHHHHHcCCCcceEEEe---cCHHHhcc--
Confidence            3455778999999999866 777777 66554  489999999987776654    444 2221111   23322211  


Q ss_pred             HHHhCCCceEEEeCCC---CHHHHHHHHHhcccCCEEEEEc
Q 017868          249 QKAMGTGIDVSFDCAG---LNKTMSTALGATCAGGKVCLVG  286 (365)
Q Consensus       249 ~~~~~~~~d~vid~~g---~~~~~~~~~~~l~~~G~~~~~g  286 (365)
                         ....+|+|+....   ....+..+.+.|+++|.++...
T Consensus        97 ---~~~~~D~v~~~~~~~~~~~~l~~~~~~l~~gG~l~~~~  134 (192)
T 1l3i_A           97 ---KIPDIDIAVVGGSGGELQEILRIIKDKLKPGGRIIVTA  134 (192)
T ss_dssp             ---TSCCEEEEEESCCTTCHHHHHHHHHHTEEEEEEEEEEE
T ss_pred             ---cCCCCCEEEECCchHHHHHHHHHHHHhcCCCcEEEEEe
Confidence               1157999997543   1456677888999999988763

>3db2_A Putative NADPH-dependent oxidoreductase; two domain protein, rossman fold, putative dehydrogenase, ST genomics; 1.70A {Desulfitobacterium hafniense dcb-2}

Probab=95.63  E-value=0.045  Score=49.19  Aligned_cols=132  Identities=10%  Similarity=0.032  Sum_probs=80.6

Q ss_pred             CEEEEEcCCHHHHHHHHHHHHHCCCCeEEEEeCChhHHH-HHHHcCCCEEEeCCCCcccHHHHHHHHHHHhCCCceEEEe
Q 017868          183 TNVLIMGAGPIGLVTMLGAPRAFGAPRIVIVDVDDYRLS-VAKEIGADNIVKVSTNLQDIAEEVEKIQKAMGTGIDVSFD  261 (365)
Q Consensus       183 ~~vlI~G~g~~G~~ai~~l~~~~g~~~vi~v~~~~~~~~-~~~~~g~~~~~~~~~~~~~~~~~i~~~~~~~~~~~d~vid  261 (365)
                      -+|.|+|+|.+|...+..+.+.-+++.+.+.++++++.+ +++++|+..   +    .++.+.+.      ...+|+|+.
T Consensus         6 ~~vgiiG~G~~g~~~~~~l~~~~~~~lvav~d~~~~~~~~~~~~~g~~~---~----~~~~~~l~------~~~~D~V~i   72 (354)
T 3db2_A            6 VGVAAIGLGRWAYVMADAYTKSEKLKLVTCYSRTEDKREKFGKRYNCAG---D----ATMEALLA------REDVEMVII   72 (354)
T ss_dssp             EEEEEECCSHHHHHHHHHHTTCSSEEEEEEECSSHHHHHHHHHHHTCCC---C----SSHHHHHH------CSSCCEEEE
T ss_pred             ceEEEEccCHHHHHHHHHHHhCCCcEEEEEECCCHHHHHHHHHHcCCCC---c----CCHHHHhc------CCCCCEEEE
Confidence            478999999999988884444347755556688777765 456778653   2    24433332      467999999


Q ss_pred             CCCCHHHHHHHHHhcccCCEEEEEccCCCCccccchH----hhhcCcEEE-e-ecccCCcHHHHHHHHHcCCC
Q 017868          262 CAGLNKTMSTALGATCAGGKVCLVGMGHHEMTVPLTP----AAVREVDVV-G-VFRYKNTWPLCLELLRSGKI  328 (365)
Q Consensus       262 ~~g~~~~~~~~~~~l~~~G~~~~~g~~~~~~~~~~~~----~~~~~~~i~-~-~~~~~~~~~~~~~~l~~g~~  328 (365)
                      |+....+...+..++..+-+ +++.-+..........    .-.+++.+. + ...+...++.+.+++++|.+
T Consensus        73 ~tp~~~h~~~~~~al~~gk~-vl~EKP~~~~~~~~~~l~~~a~~~~~~~~v~~~~R~~p~~~~~k~~i~~g~i  144 (354)
T 3db2_A           73 TVPNDKHAEVIEQCARSGKH-IYVEKPISVSLDHAQRIDQVIKETGVKFLCGHSSRRLGALRKMKEMIDTKEI  144 (354)
T ss_dssp             CSCTTSHHHHHHHHHHTTCE-EEEESSSCSSHHHHHHHHHHHHHHCCCEEEECGGGGSHHHHHHHHHHHTTTT
T ss_pred             eCChHHHHHHHHHHHHcCCE-EEEccCCCCCHHHHHHHHHHHHHcCCeEEEeechhcCHHHHHHHHHHhcCCC
Confidence            99987788888888876654 4442111110011111    112233222 2 22346678888999999887

>4iin_A 3-ketoacyl-acyl carrier protein reductase (FABG); structural genomics, center for structural genomics of infec diseases, csgid; HET: NAD; 2.40A {Helicobacter pylori} PDB: 4ijk_A

Probab=95.63  E-value=0.06  Score=46.27  Aligned_cols=82  Identities=23%  Similarity=0.296  Sum_probs=48.9

Q ss_pred             CCCEEEEEcC-CHHHHHHHHHHHHHCCCCeEEEEeC-ChhHHH----HHHHcCCCE-EEeCCC-CcccHHHHHHHHHHHh
Q 017868          181 PETNVLIMGA-GPIGLVTMLGAPRAFGAPRIVIVDV-DDYRLS----VAKEIGADN-IVKVST-NLQDIAEEVEKIQKAM  252 (365)
Q Consensus       181 ~g~~vlI~G~-g~~G~~ai~~l~~~~g~~~vi~v~~-~~~~~~----~~~~~g~~~-~~~~~~-~~~~~~~~i~~~~~~~  252 (365)
                      .+.++||+|+ +++|.++++.++ ..|++ |+.+.+ +++..+    .+++.+... .+..+- +.++..+.++++.+. 
T Consensus        28 ~~k~vlITGas~gIG~~la~~l~-~~G~~-V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~D~~~~~~v~~~~~~~~~~-  104 (271)
T 4iin_A           28 TGKNVLITGASKGIGAEIAKTLA-SMGLK-VWINYRSNAEVADALKNELEEKGYKAAVIKFDAASESDFIEAIQTIVQS-  104 (271)
T ss_dssp             SCCEEEETTCSSHHHHHHHHHHH-HTTCE-EEEEESSCHHHHHHHHHHHHHTTCCEEEEECCTTCHHHHHHHHHHHHHH-
T ss_pred             CCCEEEEECCCcHHHHHHHHHHH-HCCCE-EEEEeCCCHHHHHHHHHHHHhcCCceEEEECCCCCHHHHHHHHHHHHHh-
Confidence            5788999987 999999999555 56994 666656 444433    233444332 222222 223333344444332 


Q ss_pred             CCCceEEEeCCCC
Q 017868          253 GTGIDVSFDCAGL  265 (365)
Q Consensus       253 ~~~~d~vid~~g~  265 (365)
                      .+++|++|.++|.
T Consensus       105 ~g~id~li~nAg~  117 (271)
T 4iin_A          105 DGGLSYLVNNAGV  117 (271)
T ss_dssp             HSSCCEEEECCCC
T ss_pred             cCCCCEEEECCCc
Confidence            3589999999883

>3s55_A Putative short-chain dehydrogenase/reductase; structural genomics, seattle structural genomics center for infectious disease, ssgcid; HET: NAD; 2.10A {Mycobacterium abscessus} SCOP: c.2.1.0

Probab=95.63  E-value=0.11  Score=44.81  Aligned_cols=81  Identities=23%  Similarity=0.334  Sum_probs=48.9

Q ss_pred             CCCEEEEEcC-CHHHHHHHHHHHHHCCCCeEEEEeCC------------hhHH----HHHHHcCCCE-EEeCCC-CcccH
Q 017868          181 PETNVLIMGA-GPIGLVTMLGAPRAFGAPRIVIVDVD------------DYRL----SVAKEIGADN-IVKVST-NLQDI  241 (365)
Q Consensus       181 ~g~~vlI~G~-g~~G~~ai~~l~~~~g~~~vi~v~~~------------~~~~----~~~~~~g~~~-~~~~~~-~~~~~  241 (365)
                      .+.++||+|+ +++|.++++.++ ..|+ +|+.++++            .++.    +.+++.+... .+..+- +.++.
T Consensus         9 ~~k~~lVTGas~gIG~a~a~~l~-~~G~-~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~Dv~~~~~v   86 (281)
T 3s55_A            9 EGKTALITGGARGMGRSHAVALA-EAGA-DIAICDRCENSDVVGYPLATADDLAETVALVEKTGRRCISAKVDVKDRAAL   86 (281)
T ss_dssp             TTCEEEEETTTSHHHHHHHHHHH-HTTC-EEEEEECCSCCTTCSSCCCCHHHHHHHHHHHHHTTCCEEEEECCTTCHHHH
T ss_pred             CCCEEEEeCCCchHHHHHHHHHH-HCCC-eEEEEeCCccccccccccccHHHHHHHHHHHHhcCCeEEEEeCCCCCHHHH
Confidence            5789999987 999999999554 5699 57777665            2222    2234445432 222222 22333


Q ss_pred             HHHHHHHHHHhCCCceEEEeCCC
Q 017868          242 AEEVEKIQKAMGTGIDVSFDCAG  264 (365)
Q Consensus       242 ~~~i~~~~~~~~~~~d~vid~~g  264 (365)
                      .+.+++..+.. +++|++|.++|
T Consensus        87 ~~~~~~~~~~~-g~id~lv~nAg  108 (281)
T 3s55_A           87 ESFVAEAEDTL-GGIDIAITNAG  108 (281)
T ss_dssp             HHHHHHHHHHH-TCCCEEEECCC
T ss_pred             HHHHHHHHHhc-CCCCEEEECCC
Confidence            44444443332 48999999887

>3ksu_A 3-oxoacyl-acyl carrier protein reductase; structural genomics, PSI-2, dehydrogenase, protein structure initiative; 2.30A {Oenococcus oeni psu-1}

Probab=95.62  E-value=0.071  Score=45.57  Aligned_cols=81  Identities=16%  Similarity=0.218  Sum_probs=46.5

Q ss_pred             CCCEEEEEcC-CHHHHHHHHHHHHHCCCCeEEEEeCCh---hHHH-HHHH---cCCCE-EEeCCC-CcccHHHHHHHHHH
Q 017868          181 PETNVLIMGA-GPIGLVTMLGAPRAFGAPRIVIVDVDD---YRLS-VAKE---IGADN-IVKVST-NLQDIAEEVEKIQK  250 (365)
Q Consensus       181 ~g~~vlI~G~-g~~G~~ai~~l~~~~g~~~vi~v~~~~---~~~~-~~~~---~g~~~-~~~~~~-~~~~~~~~i~~~~~  250 (365)
                      .+.++||+|+ +++|.++++.++ ..|+ +|+.+.+..   ++.+ ..++   .+... .+..+- +.++....++++.+
T Consensus        10 ~~k~vlVTGas~GIG~aia~~la-~~G~-~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~~~Dv~d~~~v~~~~~~~~~   87 (262)
T 3ksu_A           10 KNKVIVIAGGIKNLGALTAKTFA-LESV-NLVLHYHQAKDSDTANKLKDELEDQGAKVALYQSDLSNEEEVAKLFDFAEK   87 (262)
T ss_dssp             TTCEEEEETCSSHHHHHHHHHHT-TSSC-EEEEEESCGGGHHHHHHHHHHHHTTTCEEEEEECCCCSHHHHHHHHHHHHH
T ss_pred             CCCEEEEECCCchHHHHHHHHHH-HCCC-EEEEEecCccCHHHHHHHHHHHHhcCCcEEEEECCCCCHHHHHHHHHHHHH
Confidence            5678999987 999999999454 5699 466654433   2222 2222   24322 122222 22333334444433


Q ss_pred             HhCCCceEEEeCCC
Q 017868          251 AMGTGIDVSFDCAG  264 (365)
Q Consensus       251 ~~~~~~d~vid~~g  264 (365)
                      . -+++|++|.++|
T Consensus        88 ~-~g~iD~lvnnAg  100 (262)
T 3ksu_A           88 E-FGKVDIAINTVG  100 (262)
T ss_dssp             H-HCSEEEEEECCC
T ss_pred             H-cCCCCEEEECCC
Confidence            2 258999999988

>3i4f_A 3-oxoacyl-[acyl-carrier protein] reductase; structural genomics, 3-oxoacyl-reductase, PSI-2; 2.39A {Bacillus thuringiensis serovar kurstakorganism_taxid} SCOP: c.2.1.0

Probab=95.62  E-value=0.045  Score=46.76  Aligned_cols=81  Identities=20%  Similarity=0.220  Sum_probs=47.4

Q ss_pred             CCCEEEEEcC-CHHHHHHHHHHHHHCCCCeEEEE-eCChhHHHHHHHc----CCC-EEEeCCC-CcccHHHHHHHHHHHh
Q 017868          181 PETNVLIMGA-GPIGLVTMLGAPRAFGAPRIVIV-DVDDYRLSVAKEI----GAD-NIVKVST-NLQDIAEEVEKIQKAM  252 (365)
Q Consensus       181 ~g~~vlI~G~-g~~G~~ai~~l~~~~g~~~vi~v-~~~~~~~~~~~~~----g~~-~~~~~~~-~~~~~~~~i~~~~~~~  252 (365)
                      .+.++||+|+ +++|.++++.++ ..|++ |+.+ .++++..+.+++.    +.. ..+..+- +.+++.+.++++.+..
T Consensus         6 ~~k~vlVTGas~gIG~~~a~~l~-~~G~~-v~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~Dl~~~~~v~~~~~~~~~~~   83 (264)
T 3i4f_A            6 FVRHALITAGTKGLGKQVTEKLL-AKGYS-VTVTYHSDTTAMETMKETYKDVEERLQFVQADVTKKEDLHKIVEEAMSHF   83 (264)
T ss_dssp             CCCEEEETTTTSHHHHHHHHHHH-HTTCE-EEEEESSCHHHHHHHHHHTGGGGGGEEEEECCTTSHHHHHHHHHHHHHHH
T ss_pred             ccCEEEEeCCCchhHHHHHHHHH-HCCCE-EEEEcCCChHHHHHHHHHHHhcCCceEEEEecCCCHHHHHHHHHHHHHHh
Confidence            3578999987 999999999555 55995 5555 4445444443332    221 1222222 2233444444443322


Q ss_pred             CCCceEEEeCCC
Q 017868          253 GTGIDVSFDCAG  264 (365)
Q Consensus       253 ~~~~d~vid~~g  264 (365)
                       +++|++|.++|
T Consensus        84 -g~id~lv~~Ag   94 (264)
T 3i4f_A           84 -GKIDFLINNAG   94 (264)
T ss_dssp             -SCCCEEECCCC
T ss_pred             -CCCCEEEECCc
Confidence             48999999998

>3kvo_A Hydroxysteroid dehydrogenase-like protein 2; HSDL2, human hydroxysteroid dehydrogenase like 2, SDHL2, STR genomics, structural genomics consortium; HET: NAP; 2.25A {Homo sapiens}

Probab=95.62  E-value=0.065  Score=47.99  Aligned_cols=82  Identities=30%  Similarity=0.361  Sum_probs=50.4

Q ss_pred             CCCEEEEEcC-CHHHHHHHHHHHHHCCCCeEEEEeCChhH-----------HHHHHHcCCCEE-EeCCC-CcccHHHHHH
Q 017868          181 PETNVLIMGA-GPIGLVTMLGAPRAFGAPRIVIVDVDDYR-----------LSVAKEIGADNI-VKVST-NLQDIAEEVE  246 (365)
Q Consensus       181 ~g~~vlI~G~-g~~G~~ai~~l~~~~g~~~vi~v~~~~~~-----------~~~~~~~g~~~~-~~~~~-~~~~~~~~i~  246 (365)
                      .|.++||+|+ +++|.+++..++ ..|+ +|+.+++++++           .+.+++.+.... +..+- +.+++.+.++
T Consensus        44 ~gk~vlVTGas~GIG~aia~~La-~~Ga-~Vvl~~r~~~~~~~l~~~l~~~~~~~~~~g~~~~~~~~Dv~d~~~v~~~~~  121 (346)
T 3kvo_A           44 AGCTVFITGASRGIGKAIALKAA-KDGA-NIVIAAKTAQPHPKLLGTIYTAAEEIEAVGGKALPCIVDVRDEQQISAAVE  121 (346)
T ss_dssp             TTCEEEEETTTSHHHHHHHHHHH-TTTC-EEEEEESCCSCCSSSCCCHHHHHHHHHHTTCEEEEEECCTTCHHHHHHHHH
T ss_pred             CCCEEEEeCCChHHHHHHHHHHH-HCCC-EEEEEECChhhhhhhHHHHHHHHHHHHhcCCeEEEEEccCCCHHHHHHHHH
Confidence            5789999987 999999999554 5599 56666666542           233445554322 22222 2233444444


Q ss_pred             HHHHHhCCCceEEEeCCCC
Q 017868          247 KIQKAMGTGIDVSFDCAGL  265 (365)
Q Consensus       247 ~~~~~~~~~~d~vid~~g~  265 (365)
                      ++.+.. +++|++|.++|.
T Consensus       122 ~~~~~~-g~iDilVnnAG~  139 (346)
T 3kvo_A          122 KAIKKF-GGIDILVNNASA  139 (346)
T ss_dssp             HHHHHH-SCCCEEEECCCC
T ss_pred             HHHHHc-CCCCEEEECCCC
Confidence            444333 489999999883

>2avd_A Catechol-O-methyltransferase; structural genomics, structural genomics consortium, SGC; HET: SAM; 1.70A {Homo sapiens} SCOP: c.66.1.1

Probab=95.62  E-value=0.14  Score=42.48  Aligned_cols=103  Identities=17%  Similarity=0.196  Sum_probs=66.0

Q ss_pred             CCCCCCEEEEEcCCHHHHHHHHHHHHHCC-CCeEEEEeCChhHHHHHHH----cCCC-EEEeCCCCcccHHHHHHHHHHH
Q 017868          178 NIGPETNVLIMGAGPIGLVTMLGAPRAFG-APRIVIVDVDDYRLSVAKE----IGAD-NIVKVSTNLQDIAEEVEKIQKA  251 (365)
Q Consensus       178 ~~~~g~~vlI~G~g~~G~~ai~~l~~~~g-~~~vi~v~~~~~~~~~~~~----~g~~-~~~~~~~~~~~~~~~i~~~~~~  251 (365)
                      +..++.+||-.|+| .|..++. +++..+ ...+++++.+++..+.+++    .|.. .+....   .+..+.+..+.. 
T Consensus        66 ~~~~~~~vLdiG~G-~G~~~~~-la~~~~~~~~v~~vD~~~~~~~~a~~~~~~~g~~~~i~~~~---~d~~~~~~~~~~-  139 (229)
T 2avd_A           66 RLIQAKKALDLGTF-TGYSALA-LALALPADGRVVTCEVDAQPPELGRPLWRQAEAEHKIDLRL---KPALETLDELLA-  139 (229)
T ss_dssp             HHTTCCEEEEECCT-TSHHHHH-HHTTSCTTCEEEEEESCSHHHHHHHHHHHHTTCTTTEEEEE---SCHHHHHHHHHH-
T ss_pred             HhcCCCEEEEEcCC-ccHHHHH-HHHhCCCCCEEEEEECCHHHHHHHHHHHHHCCCCCeEEEEE---cCHHHHHHHHHh-
Confidence            34677899999986 5777777 766653 4489999999887776654    3542 221111   233333333321 


Q ss_pred             hC--CCceEEEeCCCC---HHHHHHHHHhcccCCEEEEEc
Q 017868          252 MG--TGIDVSFDCAGL---NKTMSTALGATCAGGKVCLVG  286 (365)
Q Consensus       252 ~~--~~~d~vid~~g~---~~~~~~~~~~l~~~G~~~~~g  286 (365)
                      .+  ..+|+|+.....   ...+..+.+.|+++|.++...
T Consensus       140 ~~~~~~~D~v~~d~~~~~~~~~l~~~~~~L~pgG~lv~~~  179 (229)
T 2avd_A          140 AGEAGTFDVAVVDADKENCSAYYERCLQLLRPGGILAVLR  179 (229)
T ss_dssp             TTCTTCEEEEEECSCSTTHHHHHHHHHHHEEEEEEEEEEC
T ss_pred             cCCCCCccEEEECCCHHHHHHHHHHHHHHcCCCeEEEEEC
Confidence            11  679998864332   246778889999999998764

>3e9m_A Oxidoreductase, GFO/IDH/MOCA family; GFO/LDH/MOCA, PSI-II, dimeric dihydodiol dehydrogenase, structural genomics; 2.70A {Enterococcus faecalis}

Probab=95.60  E-value=0.039  Score=49.07  Aligned_cols=130  Identities=16%  Similarity=0.038  Sum_probs=79.1

Q ss_pred             CEEEEEcCCHHHHHHHHHHHHHCCCCeEEEEeCChhHHH-HHHHcCCCEEEeCCCCcccHHHHHHHHHHHhCCCceEEEe
Q 017868          183 TNVLIMGAGPIGLVTMLGAPRAFGAPRIVIVDVDDYRLS-VAKEIGADNIVKVSTNLQDIAEEVEKIQKAMGTGIDVSFD  261 (365)
Q Consensus       183 ~~vlI~G~g~~G~~ai~~l~~~~g~~~vi~v~~~~~~~~-~~~~~g~~~~~~~~~~~~~~~~~i~~~~~~~~~~~d~vid  261 (365)
                      -+|.|+|+|.+|...+..+.+..+++.+.+.++++++.+ +++++|.....      .++.+.+.      ...+|+|+.
T Consensus         6 ~~igiiG~G~~g~~~~~~l~~~~~~~l~av~d~~~~~~~~~~~~~~~~~~~------~~~~~ll~------~~~~D~V~i   73 (330)
T 3e9m_A            6 IRYGIMSTAQIVPRFVAGLRESAQAEVRGIASRRLENAQKMAKELAIPVAY------GSYEELCK------DETIDIIYI   73 (330)
T ss_dssp             EEEEECSCCTTHHHHHHHHHHSSSEEEEEEBCSSSHHHHHHHHHTTCCCCB------SSHHHHHH------CTTCSEEEE
T ss_pred             EEEEEECchHHHHHHHHHHHhCCCcEEEEEEeCCHHHHHHHHHHcCCCcee------CCHHHHhc------CCCCCEEEE
Confidence            368889999999988884544456654445577766654 56777864221      24433332      457999999


Q ss_pred             CCCCHHHHHHHHHhcccCCEEEEEccCCCCccccch---H----hhhcCcEEEee--cccCCcHHHHHHHHHcCCC
Q 017868          262 CAGLNKTMSTALGATCAGGKVCLVGMGHHEMTVPLT---P----AAVREVDVVGV--FRYKNTWPLCLELLRSGKI  328 (365)
Q Consensus       262 ~~g~~~~~~~~~~~l~~~G~~~~~g~~~~~~~~~~~---~----~~~~~~~i~~~--~~~~~~~~~~~~~l~~g~~  328 (365)
                      |+....+...+..++..+-+ +++.-   +......   .    .-.+++.+.-.  ..+...++.+.+++++|.+
T Consensus        74 ~tp~~~h~~~~~~al~~gk~-vl~EK---P~~~~~~e~~~l~~~a~~~g~~~~v~~~~r~~p~~~~~k~~i~~g~i  145 (330)
T 3e9m_A           74 PTYNQGHYSAAKLALSQGKP-VLLEK---PFTLNAAEAEELFAIAQEQGVFLMEAQKSVFLPITQKVKATIQEGGL  145 (330)
T ss_dssp             CCCGGGHHHHHHHHHHTTCC-EEECS---SCCSSHHHHHHHHHHHHHTTCCEEECCSGGGCHHHHHHHHHHHTTTT
T ss_pred             cCCCHHHHHHHHHHHHCCCe-EEEeC---CCCCCHHHHHHHHHHHHHcCCeEEEEEhhhhCHHHHHHHHHHhCCCC
Confidence            99988788888888876544 44421   1111111   1    11233333222  2235668888899999887

>3l9w_A Glutathione-regulated potassium-efflux system Pro linker, ancillary protein KEFF; potassium channel regulation, domains, antiport; HET: FMN AMP GSH; 1.75A {Escherichia coli} PDB: 3eyw_A* 3l9x_A*

Probab=95.59  E-value=0.089  Score=48.27  Aligned_cols=96  Identities=17%  Similarity=0.166  Sum_probs=66.2

Q ss_pred             CCCEEEEEcCCHHHHHHHHHHHHHCCCCeEEEEeCChhHHHHHHHcCCCEEEeCCCCcccHHHHHHHHHHHhCCCceEEE
Q 017868          181 PETNVLIMGAGPIGLVTMLGAPRAFGAPRIVIVDVDDYRLSVAKEIGADNIVKVSTNLQDIAEEVEKIQKAMGTGIDVSF  260 (365)
Q Consensus       181 ~g~~vlI~G~g~~G~~ai~~l~~~~g~~~vi~v~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~i~~~~~~~~~~~d~vi  260 (365)
                      .+++|+|.|.|.+|+.+++ .++..|. .|++++.++++.+.+++.|...+. -+..+.+   .+++   ..-..+|+||
T Consensus         3 ~~~~viIiG~Gr~G~~va~-~L~~~g~-~vvvId~d~~~v~~~~~~g~~vi~-GDat~~~---~L~~---agi~~A~~vi   73 (413)
T 3l9w_A            3 HGMRVIIAGFGRFGQITGR-LLLSSGV-KMVVLDHDPDHIETLRKFGMKVFY-GDATRMD---LLES---AGAAKAEVLI   73 (413)
T ss_dssp             -CCSEEEECCSHHHHHHHH-HHHHTTC-CEEEEECCHHHHHHHHHTTCCCEE-SCTTCHH---HHHH---TTTTTCSEEE
T ss_pred             CCCeEEEECCCHHHHHHHH-HHHHCCC-CEEEEECCHHHHHHHHhCCCeEEE-cCCCCHH---HHHh---cCCCccCEEE
Confidence            4568999999999999999 6677898 588899999999999998876432 2222222   2322   2246799999


Q ss_pred             eCCCCHHHHH---HHHHhcccCCEEEEE
Q 017868          261 DCAGLNKTMS---TALGATCAGGKVCLV  285 (365)
Q Consensus       261 d~~g~~~~~~---~~~~~l~~~G~~~~~  285 (365)
                      -+++....-.   ...+.+.+.-+++.-
T Consensus        74 v~~~~~~~n~~i~~~ar~~~p~~~Iiar  101 (413)
T 3l9w_A           74 NAIDDPQTNLQLTEMVKEHFPHLQIIAR  101 (413)
T ss_dssp             ECCSSHHHHHHHHHHHHHHCTTCEEEEE
T ss_pred             ECCCChHHHHHHHHHHHHhCCCCeEEEE
Confidence            9998753322   344455666666654

>4iiu_A 3-oxoacyl-[acyl-carrier protein] reductase; structural genomics, center for structural genomics of infec diseases, csgid; HET: NAP; 2.10A {Escherichia coli} PDB: 4iiv_A*

Probab=95.58  E-value=0.065  Score=45.90  Aligned_cols=82  Identities=20%  Similarity=0.093  Sum_probs=48.2

Q ss_pred             CCCEEEEEcC-CHHHHHHHHHHHHHCCCCeEEEEeCChhHHH-H---HHHcCCC-EEEeCCC-CcccHHHHHHHHHHHhC
Q 017868          181 PETNVLIMGA-GPIGLVTMLGAPRAFGAPRIVIVDVDDYRLS-V---AKEIGAD-NIVKVST-NLQDIAEEVEKIQKAMG  253 (365)
Q Consensus       181 ~g~~vlI~G~-g~~G~~ai~~l~~~~g~~~vi~v~~~~~~~~-~---~~~~g~~-~~~~~~~-~~~~~~~~i~~~~~~~~  253 (365)
                      .+.++||+|+ +++|.++++.++ ..|+++++...++.++.+ .   +++.+.. ..+..+- +.+++.+.++++.+. .
T Consensus        25 ~~k~vlVTGas~gIG~~la~~l~-~~G~~v~i~~~r~~~~~~~~~~~l~~~~~~~~~~~~Dl~~~~~~~~~~~~~~~~-~  102 (267)
T 4iiu_A           25 MSRSVLVTGASKGIGRAIARQLA-ADGFNIGVHYHRDAAGAQETLNAIVANGGNGRLLSFDVANREQCREVLEHEIAQ-H  102 (267)
T ss_dssp             CCCEEEETTTTSHHHHHHHHHHH-HTTCEEEEEESSCHHHHHHHHHHHHHTTCCEEEEECCTTCHHHHHHHHHHHHHH-H
T ss_pred             CCCEEEEECCCChHHHHHHHHHH-HCCCEEEEEeCCchHHHHHHHHHHHhcCCceEEEEecCCCHHHHHHHHHHHHHH-h
Confidence            4578999987 999999999554 569965555656655433 2   2233332 2232222 223333334433332 3


Q ss_pred             CCceEEEeCCC
Q 017868          254 TGIDVSFDCAG  264 (365)
Q Consensus       254 ~~~d~vid~~g  264 (365)
                      +++|++|.++|
T Consensus       103 g~id~li~nAg  113 (267)
T 4iiu_A          103 GAWYGVVSNAG  113 (267)
T ss_dssp             CCCSEEEECCC
T ss_pred             CCccEEEECCC
Confidence            58999999887

>1ixk_A Methyltransferase; open beta sheet; 1.90A {Pyrococcus horikoshii} SCOP: c.66.1.38

Probab=95.57  E-value=0.093  Score=46.28  Aligned_cols=102  Identities=23%  Similarity=0.298  Sum_probs=64.4

Q ss_pred             HhcCCCCCCEEEEEcCCHHHHHHHHHHHHHC-CCCeEEEEeCChhHHHHHH----HcCCCEEEeCCCCcccHHHHHHHHH
Q 017868          175 RRANIGPETNVLIMGAGPIGLVTMLGAPRAF-GAPRIVIVDVDDYRLSVAK----EIGADNIVKVSTNLQDIAEEVEKIQ  249 (365)
Q Consensus       175 ~~~~~~~g~~vlI~G~g~~G~~ai~~l~~~~-g~~~vi~v~~~~~~~~~~~----~~g~~~~~~~~~~~~~~~~~i~~~~  249 (365)
                      ....+++|++||=.|+|+ |..++. +++.+ +...|++++.++.+.+.++    .+|...+.....+..++..      
T Consensus       112 ~~l~~~~g~~VLDlg~G~-G~~t~~-la~~~~~~~~v~avD~s~~~l~~a~~~~~~~g~~~v~~~~~D~~~~~~------  183 (315)
T 1ixk_A          112 VALDPKPGEIVADMAAAP-GGKTSY-LAQLMRNDGVIYAFDVDENRLRETRLNLSRLGVLNVILFHSSSLHIGE------  183 (315)
T ss_dssp             HHHCCCTTCEEEECCSSC-SHHHHH-HHHHTTTCSEEEEECSCHHHHHHHHHHHHHHTCCSEEEESSCGGGGGG------
T ss_pred             HHhCCCCCCEEEEeCCCC-CHHHHH-HHHHhCCCCEEEEEcCCHHHHHHHHHHHHHhCCCeEEEEECChhhccc------
Confidence            445678999998887654 555556 55554 3347999999998876654    3465433322232222211      


Q ss_pred             HHhCCCceEEEe---CCCC-------------------------HHHHHHHHHhcccCCEEEEEc
Q 017868          250 KAMGTGIDVSFD---CAGL-------------------------NKTMSTALGATCAGGKVCLVG  286 (365)
Q Consensus       250 ~~~~~~~d~vid---~~g~-------------------------~~~~~~~~~~l~~~G~~~~~g  286 (365)
                        ....+|.|+-   |+|.                         ...+..+.+.|+++|+++...
T Consensus       184 --~~~~fD~Il~d~Pcsg~g~~~~~p~~~~~~~~~~~~~~~~~q~~~L~~~~~~LkpGG~lv~st  246 (315)
T 1ixk_A          184 --LNVEFDKILLDAPCTGSGTIHKNPERKWNRTMDDIKFCQGLQMRLLEKGLEVLKPGGILVYST  246 (315)
T ss_dssp             --GCCCEEEEEEECCTTSTTTCC--------CCHHHHHHHHHHHHHHHHHHHHHEEEEEEEEEEE
T ss_pred             --ccccCCEEEEeCCCCCcccccCChhHhhcCCHHHHHHHHHHHHHHHHHHHHhCCCCCEEEEEe
Confidence              1457999975   3331                         245677889999999998753

>3nrc_A Enoyl-[acyl-carrier-protein] reductase (NADH); rossmann fold, NADH BI oxidoreductase; HET: NAD TCL; 2.10A {Francisella tularensis subsp} PDB: 3uic_A* 2jjy_A*

Probab=95.57  E-value=0.089  Score=45.42  Aligned_cols=83  Identities=17%  Similarity=0.198  Sum_probs=50.1

Q ss_pred             CCCCEEEEEcC-C--HHHHHHHHHHHHHCCCCeEEEEeCCh--hHHHHH-HHcCCCEEEeCCCCc-ccHHHHHHHHHHHh
Q 017868          180 GPETNVLIMGA-G--PIGLVTMLGAPRAFGAPRIVIVDVDD--YRLSVA-KEIGADNIVKVSTNL-QDIAEEVEKIQKAM  252 (365)
Q Consensus       180 ~~g~~vlI~G~-g--~~G~~ai~~l~~~~g~~~vi~v~~~~--~~~~~~-~~~g~~~~~~~~~~~-~~~~~~i~~~~~~~  252 (365)
                      -++.++||+|+ |  ++|.++++.++ ..|+ +|+.++++.  ++.+.+ ++.+-...+..+-.+ ++..+.++++.+. 
T Consensus        24 l~~k~vlVTGasg~~GIG~~ia~~l~-~~G~-~V~~~~r~~~~~~~~~l~~~~~~~~~~~~Dl~~~~~v~~~~~~~~~~-  100 (280)
T 3nrc_A           24 LAGKKILITGLLSNKSIAYGIAKAMH-REGA-ELAFTYVGQFKDRVEKLCAEFNPAAVLPCDVISDQEIKDLFVELGKV-  100 (280)
T ss_dssp             TTTCEEEECCCCSTTCHHHHHHHHHH-HTTC-EEEEEECTTCHHHHHHHHGGGCCSEEEECCTTCHHHHHHHHHHHHHH-
T ss_pred             cCCCEEEEECCCCCCCHHHHHHHHHH-HcCC-EEEEeeCchHHHHHHHHHHhcCCceEEEeecCCHHHHHHHHHHHHHH-
Confidence            35789999985 4  49999999555 5699 577776665  444433 344433334333322 3333344444332 


Q ss_pred             CCCceEEEeCCCC
Q 017868          253 GTGIDVSFDCAGL  265 (365)
Q Consensus       253 ~~~~d~vid~~g~  265 (365)
                      -+++|++|.++|.
T Consensus       101 ~g~id~li~nAg~  113 (280)
T 3nrc_A          101 WDGLDAIVHSIAF  113 (280)
T ss_dssp             CSSCCEEEECCCC
T ss_pred             cCCCCEEEECCcc
Confidence            4589999998873

>3sc4_A Short chain dehydrogenase (A0QTM2 homolog); ssgcid, NIH, niaid, SBRI, UW, emerald biostructures, structu genomics; 2.50A {Mycobacterium thermoresistibile}

Probab=95.57  E-value=0.073  Score=46.15  Aligned_cols=81  Identities=22%  Similarity=0.275  Sum_probs=49.2

Q ss_pred             CCCEEEEEcC-CHHHHHHHHHHHHHCCCCeEEEEeCChhH-----------HHHHHHcCCCE-EEeCCC-CcccHHHHHH
Q 017868          181 PETNVLIMGA-GPIGLVTMLGAPRAFGAPRIVIVDVDDYR-----------LSVAKEIGADN-IVKVST-NLQDIAEEVE  246 (365)
Q Consensus       181 ~g~~vlI~G~-g~~G~~ai~~l~~~~g~~~vi~v~~~~~~-----------~~~~~~~g~~~-~~~~~~-~~~~~~~~i~  246 (365)
                      .+.++||+|+ +++|.++++.++ ..|+ +|+.+++++++           .+.+++.+... .+..+- +.++..+.++
T Consensus         8 ~~k~vlVTGas~GIG~aia~~l~-~~G~-~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~Dv~~~~~v~~~~~   85 (285)
T 3sc4_A            8 RGKTMFISGGSRGIGLAIAKRVA-ADGA-NVALVAKSAEPHPKLPGTIYTAAKEIEEAGGQALPIVGDIRDGDAVAAAVA   85 (285)
T ss_dssp             TTCEEEEESCSSHHHHHHHHHHH-TTTC-EEEEEESCCSCCSSSCCCHHHHHHHHHHHTSEEEEEECCTTSHHHHHHHHH
T ss_pred             CCCEEEEECCCCHHHHHHHHHHH-HCCC-EEEEEECChhhhhhhhHHHHHHHHHHHhcCCcEEEEECCCCCHHHHHHHHH
Confidence            4678999987 999999999555 5599 57777676542           22334444322 222222 2233344444


Q ss_pred             HHHHHhCCCceEEEeCCC
Q 017868          247 KIQKAMGTGIDVSFDCAG  264 (365)
Q Consensus       247 ~~~~~~~~~~d~vid~~g  264 (365)
                      ++.+.. +++|++|.++|
T Consensus        86 ~~~~~~-g~id~lvnnAg  102 (285)
T 3sc4_A           86 KTVEQF-GGIDICVNNAS  102 (285)
T ss_dssp             HHHHHH-SCCSEEEECCC
T ss_pred             HHHHHc-CCCCEEEECCC
Confidence            444332 48999999888

>1r18_A Protein-L-isoaspartate(D-aspartate)-O-methyltrans; methyltransferase, isomerization, protein repair, S-adenosyl homocysteine; HET: SAH; 2.20A {Drosophila melanogaster} SCOP: c.66.1.7

Probab=95.56  E-value=0.037  Score=46.18  Aligned_cols=98  Identities=17%  Similarity=0.220  Sum_probs=63.4

Q ss_pred             CCCCCCEEEEEcCCHHHHHHHHHHHHHCCC------CeEEEEeCChhHHHHHHHc----C-----CCEEEeCCCCcccHH
Q 017868          178 NIGPETNVLIMGAGPIGLVTMLGAPRAFGA------PRIVIVDVDDYRLSVAKEI----G-----ADNIVKVSTNLQDIA  242 (365)
Q Consensus       178 ~~~~g~~vlI~G~g~~G~~ai~~l~~~~g~------~~vi~v~~~~~~~~~~~~~----g-----~~~~~~~~~~~~~~~  242 (365)
                      .++++++||-.|+|. |..+.. +++..+.      ..+++++.+++..+.+++.    +     ...+.....+..+  
T Consensus        81 ~~~~~~~VLdiG~G~-G~~~~~-la~~~~~~~~~~~~~v~~vD~~~~~~~~a~~~~~~~~~~~~~~~~v~~~~~d~~~--  156 (227)
T 1r18_A           81 HLKPGARILDVGSGS-GYLTAC-FYRYIKAKGVDADTRIVGIEHQAELVRRSKANLNTDDRSMLDSGQLLIVEGDGRK--  156 (227)
T ss_dssp             TCCTTCEEEEESCTT-SHHHHH-HHHHHHHSCCCTTCEEEEEESCHHHHHHHHHHHHHHHHHHHHHTSEEEEESCGGG--
T ss_pred             hCCCCCEEEEECCCc-cHHHHH-HHHhcccccCCccCEEEEEEcCHHHHHHHHHHHHhcCccccCCCceEEEECCccc--
Confidence            578999999999865 777777 6665553      3799999998877665442    1     1111111111111  


Q ss_pred             HHHHHHHHHhCCCceEEEeCCCCHHHHHHHHHhcccCCEEEEE
Q 017868          243 EEVEKIQKAMGTGIDVSFDCAGLNKTMSTALGATCAGGKVCLV  285 (365)
Q Consensus       243 ~~i~~~~~~~~~~~d~vid~~g~~~~~~~~~~~l~~~G~~~~~  285 (365)
                       ...     ....+|+|+...........+.+.|+++|++++.
T Consensus       157 -~~~-----~~~~fD~I~~~~~~~~~~~~~~~~LkpgG~lvi~  193 (227)
T 1r18_A          157 -GYP-----PNAPYNAIHVGAAAPDTPTELINQLASGGRLIVP  193 (227)
T ss_dssp             -CCG-----GGCSEEEEEECSCBSSCCHHHHHTEEEEEEEEEE
T ss_pred             -CCC-----cCCCccEEEECCchHHHHHHHHHHhcCCCEEEEE
Confidence             010     1257999998766554557888999999998865

>3t4x_A Oxidoreductase, short chain dehydrogenase/reducta; structural genomics, center for structural genomics of infec diseases, csgid; 2.80A {Bacillus anthracis}

Probab=95.56  E-value=0.078  Score=45.43  Aligned_cols=78  Identities=18%  Similarity=0.200  Sum_probs=47.8

Q ss_pred             CCCEEEEEcC-CHHHHHHHHHHHHHCCCCeEEEEeCChhHHHH-HHHc---C-CCE--EEeCCCCcccHHHHHHHHHHHh
Q 017868          181 PETNVLIMGA-GPIGLVTMLGAPRAFGAPRIVIVDVDDYRLSV-AKEI---G-ADN--IVKVSTNLQDIAEEVEKIQKAM  252 (365)
Q Consensus       181 ~g~~vlI~G~-g~~G~~ai~~l~~~~g~~~vi~v~~~~~~~~~-~~~~---g-~~~--~~~~~~~~~~~~~~i~~~~~~~  252 (365)
                      .+.++||+|+ +++|.++++.++ ..|+ +|+.+++++++.+. ++++   + ...  .+..+-.  + .+.++++.+. 
T Consensus         9 ~~k~~lVTGas~gIG~aia~~l~-~~G~-~V~~~~r~~~~~~~~~~~l~~~~~~~~~~~~~~D~~--~-~~~~~~~~~~-   82 (267)
T 3t4x_A            9 KGKTALVTGSTAGIGKAIATSLV-AEGA-NVLINGRREENVNETIKEIRAQYPDAILQPVVADLG--T-EQGCQDVIEK-   82 (267)
T ss_dssp             TTCEEEETTCSSHHHHHHHHHHH-HTTC-EEEEEESSHHHHHHHHHHHHHHCTTCEEEEEECCTT--S-HHHHHHHHHH-
T ss_pred             CCCEEEEeCCCcHHHHHHHHHHH-HCCC-EEEEEeCCHHHHHHHHHHHHhhCCCceEEEEecCCC--C-HHHHHHHHHh-
Confidence            4678999987 999999999555 5699 57777787765432 2222   2 112  2222222  2 2234444332 


Q ss_pred             CCCceEEEeCCC
Q 017868          253 GTGIDVSFDCAG  264 (365)
Q Consensus       253 ~~~~d~vid~~g  264 (365)
                      -+++|+++.++|
T Consensus        83 ~g~id~lv~nAg   94 (267)
T 3t4x_A           83 YPKVDILINNLG   94 (267)
T ss_dssp             CCCCSEEEECCC
T ss_pred             cCCCCEEEECCC
Confidence            358999999988

>3kzv_A Uncharacterized oxidoreductase YIR035C; cytoplasmic protein, unknown function, structural genomics, MCSG, protein structure initiative; 2.00A {Saccharomyces cerevisiae}

Probab=95.56  E-value=0.068  Score=45.43  Aligned_cols=82  Identities=17%  Similarity=0.057  Sum_probs=50.6

Q ss_pred             CCEEEEEcC-CHHHHHHHHHHHHHC-CCCeEEEEeCChhHHHHH-HHcCCCE-EEeCCC-CcccHHHHHHHHHHHhCCCc
Q 017868          182 ETNVLIMGA-GPIGLVTMLGAPRAF-GAPRIVIVDVDDYRLSVA-KEIGADN-IVKVST-NLQDIAEEVEKIQKAMGTGI  256 (365)
Q Consensus       182 g~~vlI~G~-g~~G~~ai~~l~~~~-g~~~vi~v~~~~~~~~~~-~~~g~~~-~~~~~~-~~~~~~~~i~~~~~~~~~~~  256 (365)
                      |+++||+|+ +++|.++++.+++.- |+ +|+.+++++++.+.+ ++++... .+..+- +.++..+.++++.+. .+++
T Consensus         2 gk~~lVTGas~GIG~aia~~l~~~g~~~-~v~~~~r~~~~~~~~~~~~~~~~~~~~~Dv~~~~~v~~~~~~~~~~-~g~i   79 (254)
T 3kzv_A            2 GKVILVTGVSRGIGKSIVDVLFSLDKDT-VVYGVARSEAPLKKLKEKYGDRFFYVVGDITEDSVLKQLVNAAVKG-HGKI   79 (254)
T ss_dssp             CCEEEECSTTSHHHHHHHHHHHHHCSSC-EEEEEESCHHHHHHHHHHHGGGEEEEESCTTSHHHHHHHHHHHHHH-HSCC
T ss_pred             CCEEEEECCCchHHHHHHHHHHhcCCCe-EEEEecCCHHHHHHHHHHhCCceEEEECCCCCHHHHHHHHHHHHHh-cCCc
Confidence            568899987 999999998566552 35 677777887776543 4455322 222222 223333344444333 2589


Q ss_pred             eEEEeCCCC
Q 017868          257 DVSFDCAGL  265 (365)
Q Consensus       257 d~vid~~g~  265 (365)
                      |+++.++|.
T Consensus        80 d~lvnnAg~   88 (254)
T 3kzv_A           80 DSLVANAGV   88 (254)
T ss_dssp             CEEEEECCC
T ss_pred             cEEEECCcc
Confidence            999998873

>3tnl_A Shikimate dehydrogenase; structural genomics, center for structural genomics of infec diseases, csgid; HET: NAD SKM; 1.45A {Listeria monocytogenes} PDB: 3toz_A*

Probab=95.55  E-value=0.062  Score=47.30  Aligned_cols=83  Identities=17%  Similarity=0.185  Sum_probs=51.6

Q ss_pred             HHHhcCC-CCCCEEEEEcCCHHHHHHHHHHHHHCCCCeEEEEeCC---hhHHH-HHHHc----CCC-EEEeCCCCcccHH
Q 017868          173 ACRRANI-GPETNVLIMGAGPIGLVTMLGAPRAFGAPRIVIVDVD---DYRLS-VAKEI----GAD-NIVKVSTNLQDIA  242 (365)
Q Consensus       173 ~~~~~~~-~~g~~vlI~G~g~~G~~ai~~l~~~~g~~~vi~v~~~---~~~~~-~~~~~----g~~-~~~~~~~~~~~~~  242 (365)
                      +++...+ -.+.++||+|+|++|.+++. .+...|++.|.++.++   .++.+ +++++    +.. ..+.++    ++ 
T Consensus       144 ~L~~~~~~l~gk~~lVlGaGG~g~aia~-~L~~~Ga~~V~i~nR~~~~~~~a~~la~~~~~~~~~~~~~~~~~----~~-  217 (315)
T 3tnl_A          144 ALKEAGHDIIGKKMTICGAGGAATAICI-QAALDGVKEISIFNRKDDFYANAEKTVEKINSKTDCKAQLFDIE----DH-  217 (315)
T ss_dssp             HHHHTTCCCTTSEEEEECCSHHHHHHHH-HHHHTTCSEEEEEECSSTTHHHHHHHHHHHHHHSSCEEEEEETT----CH-
T ss_pred             HHHHcCCCccCCEEEEECCChHHHHHHH-HHHHCCCCEEEEEECCCchHHHHHHHHHHhhhhcCCceEEeccc----hH-
Confidence            3444333 36789999999999999999 5567899778888888   66554 33333    321 222322    11 


Q ss_pred             HHHHHHHHHhCCCceEEEeCCCC
Q 017868          243 EEVEKIQKAMGTGIDVSFDCAGL  265 (365)
Q Consensus       243 ~~i~~~~~~~~~~~d~vid~~g~  265 (365)
                      +.+.+..    ..+|+||+|+..
T Consensus       218 ~~l~~~l----~~aDiIINaTp~  236 (315)
T 3tnl_A          218 EQLRKEI----AESVIFTNATGV  236 (315)
T ss_dssp             HHHHHHH----HTCSEEEECSST
T ss_pred             HHHHhhh----cCCCEEEECccC
Confidence            1222221    368999998863

>2wyu_A Enoyl-[acyl carrier protein] reductase; oxidoreductase, fatty acid biosynthesis, oxidation reduction; 1.50A {Thermus thermophilus} PDB: 1ulu_A 2wyv_A* 2wyw_A* 2yw9_A*

Probab=95.55  E-value=0.11  Score=44.29  Aligned_cols=82  Identities=13%  Similarity=0.296  Sum_probs=48.7

Q ss_pred             CCCEEEEEcC---CHHHHHHHHHHHHHCCCCeEEEEeCChh---HHHHH-HHcCCCEEEeCCCCc-ccHHHHHHHHHHHh
Q 017868          181 PETNVLIMGA---GPIGLVTMLGAPRAFGAPRIVIVDVDDY---RLSVA-KEIGADNIVKVSTNL-QDIAEEVEKIQKAM  252 (365)
Q Consensus       181 ~g~~vlI~G~---g~~G~~ai~~l~~~~g~~~vi~v~~~~~---~~~~~-~~~g~~~~~~~~~~~-~~~~~~i~~~~~~~  252 (365)
                      .+.++||+|+   |++|.++++.+++. |+ +|+.++++++   ..+.+ ++.+....+..+-.+ +++...+++..+..
T Consensus         7 ~~k~vlVTGas~~~gIG~~ia~~l~~~-G~-~V~~~~r~~~~~~~~~~l~~~~~~~~~~~~D~~~~~~v~~~~~~~~~~~   84 (261)
T 2wyu_A            7 SGKKALVMGVTNQRSLGFAIAAKLKEA-GA-EVALSYQAERLRPEAEKLAEALGGALLFRADVTQDEELDALFAGVKEAF   84 (261)
T ss_dssp             TTCEEEEESCCSSSSHHHHHHHHHHHH-TC-EEEEEESCGGGHHHHHHHHHHTTCCEEEECCTTCHHHHHHHHHHHHHHH
T ss_pred             CCCEEEEECCCCCCcHHHHHHHHHHHC-CC-EEEEEcCCHHHHHHHHHHHHhcCCcEEEECCCCCHHHHHHHHHHHHHHc
Confidence            4678999985   58999999956554 98 5777777664   22222 334433333333222 23333344333322


Q ss_pred             CCCceEEEeCCCC
Q 017868          253 GTGIDVSFDCAGL  265 (365)
Q Consensus       253 ~~~~d~vid~~g~  265 (365)
                       +++|++|.++|.
T Consensus        85 -g~iD~lv~~Ag~   96 (261)
T 2wyu_A           85 -GGLDYLVHAIAF   96 (261)
T ss_dssp             -SSEEEEEECCCC
T ss_pred             -CCCCEEEECCCC
Confidence             489999998873

>1i1n_A Protein-L-isoaspartate O-methyltransferase; S-adenosyl homocysteine, protein repair; HET: SAH; 1.50A {Homo sapiens} SCOP: c.66.1.7 PDB: 1kr5_A*

Probab=95.55  E-value=0.023  Score=47.34  Aligned_cols=98  Identities=15%  Similarity=0.135  Sum_probs=63.2

Q ss_pred             CCCCCCEEEEEcCCHHHHHHHHHHHHHCCC-CeEEEEeCChhHHHHHHH----cC-----CCEEEeCCCCcccHHHHHHH
Q 017868          178 NIGPETNVLIMGAGPIGLVTMLGAPRAFGA-PRIVIVDVDDYRLSVAKE----IG-----ADNIVKVSTNLQDIAEEVEK  247 (365)
Q Consensus       178 ~~~~g~~vlI~G~g~~G~~ai~~l~~~~g~-~~vi~v~~~~~~~~~~~~----~g-----~~~~~~~~~~~~~~~~~i~~  247 (365)
                      .++++++||-.|+|. |..+.. +++..|. ..+++++.+++..+.+++    .+     ...+.....+..+.      
T Consensus        74 ~~~~~~~vLDiG~G~-G~~~~~-la~~~~~~~~v~~vD~s~~~~~~a~~~~~~~~~~~~~~~~v~~~~~d~~~~------  145 (226)
T 1i1n_A           74 QLHEGAKALDVGSGS-GILTAC-FARMVGCTGKVIGIDHIKELVDDSVNNVRKDDPTLLSSGRVQLVVGDGRMG------  145 (226)
T ss_dssp             TSCTTCEEEEETCTT-SHHHHH-HHHHHCTTCEEEEEESCHHHHHHHHHHHHHHCTHHHHTSSEEEEESCGGGC------
T ss_pred             hCCCCCEEEEEcCCc-CHHHHH-HHHHhCCCcEEEEEeCCHHHHHHHHHHHHhhcccccCCCcEEEEECCcccC------
Confidence            378999999999865 767777 6666553 289999999988776543    22     11111111111100      


Q ss_pred             HHHHhCCCceEEEeCCCCHHHHHHHHHhcccCCEEEEE
Q 017868          248 IQKAMGTGIDVSFDCAGLNKTMSTALGATCAGGKVCLV  285 (365)
Q Consensus       248 ~~~~~~~~~d~vid~~g~~~~~~~~~~~l~~~G~~~~~  285 (365)
                      .  .....+|+|+........+..+.+.|+++|.++..
T Consensus       146 ~--~~~~~fD~i~~~~~~~~~~~~~~~~LkpgG~lv~~  181 (226)
T 1i1n_A          146 Y--AEEAPYDAIHVGAAAPVVPQALIDQLKPGGRLILP  181 (226)
T ss_dssp             C--GGGCCEEEEEECSBBSSCCHHHHHTEEEEEEEEEE
T ss_pred             c--ccCCCcCEEEECCchHHHHHHHHHhcCCCcEEEEE
Confidence            0  01357999987655444567888999999998875

>1spx_A Short-chain reductase family member (5L265); parallel beta-sheet of seven strands in the order 3214567; 2.10A {Caenorhabditis elegans} SCOP: c.2.1.2

Probab=95.53  E-value=0.063  Score=46.25  Aligned_cols=82  Identities=23%  Similarity=0.271  Sum_probs=49.5

Q ss_pred             CCCEEEEEcC-CHHHHHHHHHHHHHCCCCeEEEEeCChhHHHH-HHHc---C---CC-EEEeCCC-CcccHHHHHHHHHH
Q 017868          181 PETNVLIMGA-GPIGLVTMLGAPRAFGAPRIVIVDVDDYRLSV-AKEI---G---AD-NIVKVST-NLQDIAEEVEKIQK  250 (365)
Q Consensus       181 ~g~~vlI~G~-g~~G~~ai~~l~~~~g~~~vi~v~~~~~~~~~-~~~~---g---~~-~~~~~~~-~~~~~~~~i~~~~~  250 (365)
                      .+.++||+|+ |++|.+++..++ ..|+ .|+.+++++++.+. .+++   .   .. ..+..+- +.+++...+++..+
T Consensus         5 ~~k~vlVTGas~gIG~~ia~~l~-~~G~-~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~~~D~~~~~~~~~~~~~~~~   82 (278)
T 1spx_A            5 AEKVAIITGSSNGIGRATAVLFA-REGA-KVTITGRHAERLEETRQQILAAGVSEQNVNSVVADVTTDAGQDEILSTTLG   82 (278)
T ss_dssp             TTCEEEETTTTSHHHHHHHHHHH-HTTC-EEEEEESCHHHHHHHHHHHHHTTCCGGGEEEEECCTTSHHHHHHHHHHHHH
T ss_pred             CCCEEEEeCCCchHHHHHHHHHH-HCCC-EEEEEeCCHHHHHHHHHHHHhcccCCCceeEEecccCCHHHHHHHHHHHHH
Confidence            4678999987 999999999555 5598 57777788776543 3333   2   11 1222222 22333334444333


Q ss_pred             HhCCCceEEEeCCCC
Q 017868          251 AMGTGIDVSFDCAGL  265 (365)
Q Consensus       251 ~~~~~~d~vid~~g~  265 (365)
                      .. +++|++|.++|.
T Consensus        83 ~~-g~id~lv~~Ag~   96 (278)
T 1spx_A           83 KF-GKLDILVNNAGA   96 (278)
T ss_dssp             HH-SCCCEEEECCC-
T ss_pred             Hc-CCCCEEEECCCC
Confidence            22 489999998873

>2fwm_X 2,3-dihydro-2,3-dihydroxybenzoate dehydrogenase; enterobactin, rossman fold, chorismate metabolism, short-CHA oxidoreductase, tetramer; 2.00A {Escherichia coli}

Probab=95.52  E-value=0.063  Score=45.51  Aligned_cols=77  Identities=19%  Similarity=0.261  Sum_probs=47.3

Q ss_pred             CCCEEEEEcC-CHHHHHHHHHHHHHCCCCeEEEEeCChhHHHHHHHcCCCEEEeCCC-CcccHHHHHHHHHHHhCCCceE
Q 017868          181 PETNVLIMGA-GPIGLVTMLGAPRAFGAPRIVIVDVDDYRLSVAKEIGADNIVKVST-NLQDIAEEVEKIQKAMGTGIDV  258 (365)
Q Consensus       181 ~g~~vlI~G~-g~~G~~ai~~l~~~~g~~~vi~v~~~~~~~~~~~~~g~~~~~~~~~-~~~~~~~~i~~~~~~~~~~~d~  258 (365)
                      .+.++||+|+ |++|.+++..+ ...|+ .|+.++++++.    ++.++ ..+..+- +.+++.+.+++..+. .+++|+
T Consensus         6 ~~k~vlVTGas~giG~~ia~~l-~~~G~-~V~~~~r~~~~----~~~~~-~~~~~D~~d~~~~~~~~~~~~~~-~g~id~   77 (250)
T 2fwm_X            6 SGKNVWVTGAGKGIGYATALAF-VEAGA-KVTGFDQAFTQ----EQYPF-ATEVMDVADAAQVAQVCQRLLAE-TERLDA   77 (250)
T ss_dssp             TTCEEEEESTTSHHHHHHHHHH-HHTTC-EEEEEESCCCS----SCCSS-EEEECCTTCHHHHHHHHHHHHHH-CSCCCE
T ss_pred             CCCEEEEeCCCcHHHHHHHHHH-HHCCC-EEEEEeCchhh----hcCCc-eEEEcCCCCHHHHHHHHHHHHHH-cCCCCE
Confidence            4678999987 99999999945 45698 56777666542    22342 2232222 223333444444332 358999


Q ss_pred             EEeCCCC
Q 017868          259 SFDCAGL  265 (365)
Q Consensus       259 vid~~g~  265 (365)
                      +|.++|.
T Consensus        78 lv~~Ag~   84 (250)
T 2fwm_X           78 LVNAAGI   84 (250)
T ss_dssp             EEECCCC
T ss_pred             EEECCCc
Confidence            9998873

>1cyd_A Carbonyl reductase; short-chain dehydrogenase, oxidoreductase; HET: NAP; 1.80A {Mus musculus} SCOP: c.2.1.2

Probab=95.50  E-value=0.073  Score=44.72  Aligned_cols=78  Identities=27%  Similarity=0.208  Sum_probs=49.0

Q ss_pred             CCCEEEEEcC-CHHHHHHHHHHHHHCCCCeEEEEeCChhHHHHH-HHcCCCEEEeCCCCcccHHHHHHHHHHHhCCCceE
Q 017868          181 PETNVLIMGA-GPIGLVTMLGAPRAFGAPRIVIVDVDDYRLSVA-KEIGADNIVKVSTNLQDIAEEVEKIQKAMGTGIDV  258 (365)
Q Consensus       181 ~g~~vlI~G~-g~~G~~ai~~l~~~~g~~~vi~v~~~~~~~~~~-~~~g~~~~~~~~~~~~~~~~~i~~~~~~~~~~~d~  258 (365)
                      ++.++||+|+ |.+|.++++.++ ..|+ .|+++++++++.+.+ +++.....+..+-.  +. +.+++..+ .-+++|+
T Consensus         6 ~~~~vlVTGasggiG~~~a~~l~-~~G~-~V~~~~r~~~~~~~~~~~~~~~~~~~~D~~--~~-~~~~~~~~-~~~~id~   79 (244)
T 1cyd_A            6 SGLRALVTGAGKGIGRDTVKALH-ASGA-KVVAVTRTNSDLVSLAKECPGIEPVCVDLG--DW-DATEKALG-GIGPVDL   79 (244)
T ss_dssp             TTCEEEEESTTSHHHHHHHHHHH-HTTC-EEEEEESCHHHHHHHHHHSTTCEEEECCTT--CH-HHHHHHHT-TCCCCSE
T ss_pred             CCCEEEEeCCCchHHHHHHHHHH-HCCC-EEEEEeCCHHHHHHHHHhccCCCcEEecCC--CH-HHHHHHHH-HcCCCCE
Confidence            4678999987 999999999554 5698 577777877665433 33322233332222  22 23443332 1247899


Q ss_pred             EEeCCC
Q 017868          259 SFDCAG  264 (365)
Q Consensus       259 vid~~g  264 (365)
                      +|.++|
T Consensus        80 vi~~Ag   85 (244)
T 1cyd_A           80 LVNNAA   85 (244)
T ss_dssp             EEECCC
T ss_pred             EEECCc
Confidence            999988

>3a28_C L-2.3-butanediol dehydrogenase; chiral substrate recognition, oxidoreductase; HET: NAD; 2.00A {Brevibacterium saccharolyticum}

Probab=95.50  E-value=0.1  Score=44.44  Aligned_cols=80  Identities=18%  Similarity=0.276  Sum_probs=48.0

Q ss_pred             CCEEEEEcC-CHHHHHHHHHHHHHCCCCeEEEEeCChhH--HH-HHHHc---CCCE-EEeCCC-CcccHHHHHHHHHHHh
Q 017868          182 ETNVLIMGA-GPIGLVTMLGAPRAFGAPRIVIVDVDDYR--LS-VAKEI---GADN-IVKVST-NLQDIAEEVEKIQKAM  252 (365)
Q Consensus       182 g~~vlI~G~-g~~G~~ai~~l~~~~g~~~vi~v~~~~~~--~~-~~~~~---g~~~-~~~~~~-~~~~~~~~i~~~~~~~  252 (365)
                      +.++||+|+ +++|.++++.+++. |+ .|+.+++++++  .+ ..+++   +... .+..+- +.+++.+.+++..+..
T Consensus         2 ~k~vlVTGas~gIG~~ia~~l~~~-G~-~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~~Dv~~~~~v~~~~~~~~~~~   79 (258)
T 3a28_C            2 SKVAMVTGGAQGIGRGISEKLAAD-GF-DIAVADLPQQEEQAAETIKLIEAADQKAVFVGLDVTDKANFDSAIDEAAEKL   79 (258)
T ss_dssp             CCEEEEETTTSHHHHHHHHHHHHH-TC-EEEEEECGGGHHHHHHHHHHHHTTTCCEEEEECCTTCHHHHHHHHHHHHHHH
T ss_pred             CCEEEEeCCCcHHHHHHHHHHHHC-CC-EEEEEeCCcchHHHHHHHHHHHhcCCcEEEEEccCCCHHHHHHHHHHHHHHh
Confidence            568999987 99999999956554 98 56777776655  32 33332   3322 222222 2233333444443322


Q ss_pred             CCCceEEEeCCC
Q 017868          253 GTGIDVSFDCAG  264 (365)
Q Consensus       253 ~~~~d~vid~~g  264 (365)
                       +++|++|.++|
T Consensus        80 -g~iD~lv~nAg   90 (258)
T 3a28_C           80 -GGFDVLVNNAG   90 (258)
T ss_dssp             -TCCCEEEECCC
T ss_pred             -CCCCEEEECCC
Confidence             47999999887

>2cfc_A 2-(R)-hydroxypropyl-COM dehydrogenase; NAD, oxidoreductase; HET: NAD KPC; 1.8A {Xanthobacter autotrophicus}

Probab=95.49  E-value=0.11  Score=43.75  Aligned_cols=80  Identities=20%  Similarity=0.263  Sum_probs=48.4

Q ss_pred             CCEEEEEcC-CHHHHHHHHHHHHHCCCCeEEEEeCChhHHHHH-HHc----CCC-EEEeCCC-CcccHHHHHHHHHHHhC
Q 017868          182 ETNVLIMGA-GPIGLVTMLGAPRAFGAPRIVIVDVDDYRLSVA-KEI----GAD-NIVKVST-NLQDIAEEVEKIQKAMG  253 (365)
Q Consensus       182 g~~vlI~G~-g~~G~~ai~~l~~~~g~~~vi~v~~~~~~~~~~-~~~----g~~-~~~~~~~-~~~~~~~~i~~~~~~~~  253 (365)
                      +.++||+|+ |++|.+++..++ ..|+ .|+.+++++++.+.+ +++    +.. ..+..+- +.+++.+.++++.+.. 
T Consensus         2 ~k~vlItGasggiG~~~a~~l~-~~G~-~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~D~~~~~~~~~~~~~~~~~~-   78 (250)
T 2cfc_A            2 SRVAIVTGASSGNGLAIATRFL-ARGD-RVAALDLSAETLEETARTHWHAYADKVLRVRADVADEGDVNAAIAATMEQF-   78 (250)
T ss_dssp             CCEEEEETTTSHHHHHHHHHHH-HTTC-EEEEEESCHHHHHHHHHHHSTTTGGGEEEEECCTTCHHHHHHHHHHHHHHH-
T ss_pred             CCEEEEeCCCchHHHHHHHHHH-HCCC-EEEEEeCCHHHHHHHHHHHHHhcCCcEEEEEecCCCHHHHHHHHHHHHHHh-
Confidence            568999987 999999999554 5698 577777877665433 333    222 1222222 2223333333333322 


Q ss_pred             CCceEEEeCCC
Q 017868          254 TGIDVSFDCAG  264 (365)
Q Consensus       254 ~~~d~vid~~g  264 (365)
                      +++|++|.++|
T Consensus        79 ~~id~li~~Ag   89 (250)
T 2cfc_A           79 GAIDVLVNNAG   89 (250)
T ss_dssp             SCCCEEEECCC
T ss_pred             CCCCEEEECCC
Confidence            47999999886

>3euw_A MYO-inositol dehydrogenase; protein structure initiative II (PSI II), NYSGXRC, MYO-inosi dehydrogenase, oxidoreductase, tetramer; 2.30A {Corynebacterium glutamicum}

Probab=95.48  E-value=0.047  Score=48.79  Aligned_cols=132  Identities=17%  Similarity=0.096  Sum_probs=78.8

Q ss_pred             CEEEEEcCCHHHHHHHHHHHHHCCCCeEEEEeCChhHHH-HHHHcCCCEEEeCCCCcccHHHHHHHHHHHhCCCceEEEe
Q 017868          183 TNVLIMGAGPIGLVTMLGAPRAFGAPRIVIVDVDDYRLS-VAKEIGADNIVKVSTNLQDIAEEVEKIQKAMGTGIDVSFD  261 (365)
Q Consensus       183 ~~vlI~G~g~~G~~ai~~l~~~~g~~~vi~v~~~~~~~~-~~~~~g~~~~~~~~~~~~~~~~~i~~~~~~~~~~~d~vid  261 (365)
                      -+|.|+|+|.+|...+..+.+..+++.+.+.++++++.+ +++++|+. ..      .++.+.+.      ...+|+|+.
T Consensus         5 ~rvgiiG~G~~g~~~~~~l~~~~~~~l~av~d~~~~~~~~~a~~~g~~-~~------~~~~~~l~------~~~~D~V~i   71 (344)
T 3euw_A            5 LRIALFGAGRIGHVHAANIAANPDLELVVIADPFIEGAQRLAEANGAE-AV------ASPDEVFA------RDDIDGIVI   71 (344)
T ss_dssp             EEEEEECCSHHHHHHHHHHHHCTTEEEEEEECSSHHHHHHHHHTTTCE-EE------SSHHHHTT------CSCCCEEEE
T ss_pred             eEEEEECCcHHHHHHHHHHHhCCCcEEEEEECCCHHHHHHHHHHcCCc-ee------CCHHHHhc------CCCCCEEEE
Confidence            368899999999988884554446755556777777755 45677742 22      23333221      357999999


Q ss_pred             CCCCHHHHHHHHHhcccCCEEEEEccCCCCccccchH----hhhcCcEEE-e-ecccCCcHHHHHHHHHcCCC
Q 017868          262 CAGLNKTMSTALGATCAGGKVCLVGMGHHEMTVPLTP----AAVREVDVV-G-VFRYKNTWPLCLELLRSGKI  328 (365)
Q Consensus       262 ~~g~~~~~~~~~~~l~~~G~~~~~g~~~~~~~~~~~~----~~~~~~~i~-~-~~~~~~~~~~~~~~l~~g~~  328 (365)
                      |+....+...+..++..+-+ +++.-+..........    .-.+++.+. + ...+...+..+.+++++|.+
T Consensus        72 ~tp~~~h~~~~~~al~~gk~-v~~EKP~~~~~~~~~~l~~~a~~~g~~~~v~~~~r~~p~~~~~k~~i~~g~i  143 (344)
T 3euw_A           72 GSPTSTHVDLITRAVERGIP-ALCEKPIDLDIEMVRACKEKIGDGASKVMLGFNRRFDPSFAAINARVANQEI  143 (344)
T ss_dssp             CSCGGGHHHHHHHHHHTTCC-EEECSCSCSCHHHHHHHHHHHGGGGGGEEECCGGGGCHHHHHHHHHHHTTTT
T ss_pred             eCCchhhHHHHHHHHHcCCc-EEEECCCCCCHHHHHHHHHHHHhcCCeEEecchhhcCHHHHHHHHHHhcCCC
Confidence            99988788888888876644 4442111100001111    111222222 2 22335678888899999887

>3e48_A Putative nucleoside-diphosphate-sugar epimerase; alpha-beta protein., structural genomics, PSI-2, protein STR initiative; 1.60A {Staphylococcus aureus subsp}

Probab=95.48  E-value=0.041  Score=47.65  Aligned_cols=96  Identities=13%  Similarity=0.078  Sum_probs=55.7

Q ss_pred             EEEEEcC-CHHHHHHHHHHHHHCCCCeEEEEeCChhHHHHHHHcCCCEEEeCCCCcccHHHHHHHHHHHhCCCceEEEeC
Q 017868          184 NVLIMGA-GPIGLVTMLGAPRAFGAPRIVIVDVDDYRLSVAKEIGADNIVKVSTNLQDIAEEVEKIQKAMGTGIDVSFDC  262 (365)
Q Consensus       184 ~vlI~G~-g~~G~~ai~~l~~~~g~~~vi~v~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~i~~~~~~~~~~~d~vid~  262 (365)
                      +|||+|+ |.+|..+++.+++..|.+ |+++.+++++...+...++. ++..+-  .+. +.+.+.    -.++|+||.+
T Consensus         2 ~ilVtGatG~iG~~l~~~L~~~~g~~-V~~~~R~~~~~~~~~~~~v~-~~~~D~--~d~-~~l~~~----~~~~d~vi~~   72 (289)
T 3e48_A            2 NIMLTGATGHLGTHITNQAIANHIDH-FHIGVRNVEKVPDDWRGKVS-VRQLDY--FNQ-ESMVEA----FKGMDTVVFI   72 (289)
T ss_dssp             CEEEETTTSHHHHHHHHHHHHTTCTT-EEEEESSGGGSCGGGBTTBE-EEECCT--TCH-HHHHHH----TTTCSEEEEC
T ss_pred             EEEEEcCCchHHHHHHHHHhhCCCCc-EEEEECCHHHHHHhhhCCCE-EEEcCC--CCH-HHHHHH----HhCCCEEEEe
Confidence            5899997 999999999544333774 66666777664433333433 222222  222 233333    2589999999


Q ss_pred             CCCH-------HHHHHHHHhcccC--CEEEEEccC
Q 017868          263 AGLN-------KTMSTALGATCAG--GKVCLVGMG  288 (365)
Q Consensus       263 ~g~~-------~~~~~~~~~l~~~--G~~~~~g~~  288 (365)
                      ++..       ......++.+...  ++++.++..
T Consensus        73 a~~~~~~~~~~~~~~~l~~aa~~~gv~~iv~~Ss~  107 (289)
T 3e48_A           73 PSIIHPSFKRIPEVENLVYAAKQSGVAHIIFIGYY  107 (289)
T ss_dssp             CCCCCSHHHHHHHHHHHHHHHHHTTCCEEEEEEES
T ss_pred             CCCCccchhhHHHHHHHHHHHHHcCCCEEEEEccc
Confidence            8741       1223444544443  477777653

>1edo_A Beta-keto acyl carrier protein reductase; nucleotide fold, rossmann fold, oxidoreductase; HET: NAP; 2.30A {Brassica napus} SCOP: c.2.1.2 PDB: 2cdh_G

Probab=95.48  E-value=0.076  Score=44.61  Aligned_cols=81  Identities=20%  Similarity=0.177  Sum_probs=46.9

Q ss_pred             CCEEEEEcC-CHHHHHHHHHHHHHCCCCeEEEEeCChhHHHHH----HHcCCCE-EEeCCC-CcccHHHHHHHHHHHhCC
Q 017868          182 ETNVLIMGA-GPIGLVTMLGAPRAFGAPRIVIVDVDDYRLSVA----KEIGADN-IVKVST-NLQDIAEEVEKIQKAMGT  254 (365)
Q Consensus       182 g~~vlI~G~-g~~G~~ai~~l~~~~g~~~vi~v~~~~~~~~~~----~~~g~~~-~~~~~~-~~~~~~~~i~~~~~~~~~  254 (365)
                      |.++||+|+ |++|.++++.++ ..|+++++...+++++.+.+    ++.+... .+..+- +.+++...++++.+. -+
T Consensus         1 ~k~vlVTGasggiG~~la~~l~-~~G~~v~~~~~r~~~~~~~~~~~~~~~~~~~~~~~~D~~~~~~~~~~~~~~~~~-~g   78 (244)
T 1edo_A            1 SPVVVVTGASRGIGKAIALSLG-KAGCKVLVNYARSAKAAEEVSKQIEAYGGQAITFGGDVSKEADVEAMMKTAIDA-WG   78 (244)
T ss_dssp             CCEEEETTCSSHHHHHHHHHHH-HTTCEEEEEESSCHHHHHHHHHHHHHHTCEEEEEECCTTSHHHHHHHHHHHHHH-SS
T ss_pred             CCEEEEeCCCchHHHHHHHHHH-HCCCEEEEEcCCCHHHHHHHHHHHHhcCCcEEEEeCCCCCHHHHHHHHHHHHHH-cC
Confidence            468899987 999999999554 56985444356776654322    2234321 122222 223333334433332 35


Q ss_pred             CceEEEeCCC
Q 017868          255 GIDVSFDCAG  264 (365)
Q Consensus       255 ~~d~vid~~g  264 (365)
                      ++|++|.++|
T Consensus        79 ~id~li~~Ag   88 (244)
T 1edo_A           79 TIDVVVNNAG   88 (244)
T ss_dssp             CCSEEEECCC
T ss_pred             CCCEEEECCC
Confidence            8999999887

>3o8q_A Shikimate 5-dehydrogenase I alpha; structural genomics, center for structural genomics of infec diseases, csgid; HET: EPE; 1.45A {Vibrio cholerae biovar el tor} PDB: 3sef_A* 3pgj_A* 3o8q_B*

Probab=95.47  E-value=0.054  Score=46.89  Aligned_cols=70  Identities=13%  Similarity=0.156  Sum_probs=49.5

Q ss_pred             CCCEEEEEcCCHHHHHHHHHHHHHCCCCeEEEEeCChhHHH-HHHHcCC---CEEEeCCCCcccHHHHHHHHHHHhCCCc
Q 017868          181 PETNVLIMGAGPIGLVTMLGAPRAFGAPRIVIVDVDDYRLS-VAKEIGA---DNIVKVSTNLQDIAEEVEKIQKAMGTGI  256 (365)
Q Consensus       181 ~g~~vlI~G~g~~G~~ai~~l~~~~g~~~vi~v~~~~~~~~-~~~~~g~---~~~~~~~~~~~~~~~~i~~~~~~~~~~~  256 (365)
                      .+.+++|+|+|++|.+++. .+...|+..|.++.++.++.+ ++++++.   .....++    ++           ...+
T Consensus       125 ~~k~vlvlGaGg~g~aia~-~L~~~G~~~v~v~~R~~~~a~~la~~~~~~~~~~~~~~~----~l-----------~~~a  188 (281)
T 3o8q_A          125 KGATILLIGAGGAARGVLK-PLLDQQPASITVTNRTFAKAEQLAELVAAYGEVKAQAFE----QL-----------KQSY  188 (281)
T ss_dssp             TTCEEEEECCSHHHHHHHH-HHHTTCCSEEEEEESSHHHHHHHHHHHGGGSCEEEEEGG----GC-----------CSCE
T ss_pred             cCCEEEEECchHHHHHHHH-HHHhcCCCeEEEEECCHHHHHHHHHHhhccCCeeEeeHH----Hh-----------cCCC
Confidence            6789999999999999998 556679877888888887754 4555553   1222211    11           2579


Q ss_pred             eEEEeCCCCH
Q 017868          257 DVSFDCAGLN  266 (365)
Q Consensus       257 d~vid~~g~~  266 (365)
                      |+||+++...
T Consensus       189 DiIInaTp~g  198 (281)
T 3o8q_A          189 DVIINSTSAS  198 (281)
T ss_dssp             EEEEECSCCC
T ss_pred             CEEEEcCcCC
Confidence            9999998753

>3pxx_A Carveol dehydrogenase; structural genomics, seattle structural genomics center for infectious disease, ssgcid, NAD, tuberculosis; HET: NAD; 2.00A {Mycobacterium avium} SCOP: c.2.1.0

Probab=95.47  E-value=0.12  Score=44.72  Aligned_cols=82  Identities=20%  Similarity=0.305  Sum_probs=48.6

Q ss_pred             CCCEEEEEcC-CHHHHHHHHHHHHHCCCCeEEEEeCC------------hhHHH----HHHHcCCCE-EEeCCC-CcccH
Q 017868          181 PETNVLIMGA-GPIGLVTMLGAPRAFGAPRIVIVDVD------------DYRLS----VAKEIGADN-IVKVST-NLQDI  241 (365)
Q Consensus       181 ~g~~vlI~G~-g~~G~~ai~~l~~~~g~~~vi~v~~~------------~~~~~----~~~~~g~~~-~~~~~~-~~~~~  241 (365)
                      .|.++||+|+ +++|.++++.++ ..|+ +|+.++++            .++.+    .++..+... .+..+- +.++.
T Consensus         9 ~gk~vlVTGas~gIG~~ia~~l~-~~G~-~V~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~D~~~~~~v   86 (287)
T 3pxx_A            9 QDKVVLVTGGARGQGRSHAVKLA-EEGA-DIILFDICHDIETNEYPLATSRDLEEAGLEVEKTGRKAYTAEVDVRDRAAV   86 (287)
T ss_dssp             TTCEEEEETTTSHHHHHHHHHHH-HTTC-EEEEEECCSCCTTSCSCCCCHHHHHHHHHHHHHTTSCEEEEECCTTCHHHH
T ss_pred             CCCEEEEeCCCChHHHHHHHHHH-HCCC-eEEEEcccccccccccchhhhHHHHHHHHHHHhcCCceEEEEccCCCHHHH
Confidence            5789999987 999999999555 5599 56777665            33322    223344332 222222 22333


Q ss_pred             HHHHHHHHHHhCCCceEEEeCCCC
Q 017868          242 AEEVEKIQKAMGTGIDVSFDCAGL  265 (365)
Q Consensus       242 ~~~i~~~~~~~~~~~d~vid~~g~  265 (365)
                      .+.++++.+.. +++|++|.++|.
T Consensus        87 ~~~~~~~~~~~-g~id~lv~nAg~  109 (287)
T 3pxx_A           87 SRELANAVAEF-GKLDVVVANAGI  109 (287)
T ss_dssp             HHHHHHHHHHH-SCCCEEEECCCC
T ss_pred             HHHHHHHHHHc-CCCCEEEECCCc
Confidence            33444443332 489999998873

>3phh_A Shikimate dehydrogenase; shikimate pathway, helicobacter PYL oxidoreductase, alpha/beta domain, rossmann fold; HET: SKM; 1.42A {Helicobacter pylori} PDB: 3phg_A* 3phi_A* 3phj_A* 4foo_A 4fpx_A 4fos_A* 4fr5_A* 4fq8_A*

Probab=95.47  E-value=0.062  Score=46.07  Aligned_cols=103  Identities=17%  Similarity=0.190  Sum_probs=64.2

Q ss_pred             CCEEEEEcCCHHHHHHHHHHHHHCCCCeEEEEeCChhHHHHHHHcCCCEEEeCCCCcccHHHHHHHHHHHhCCCceEEEe
Q 017868          182 ETNVLIMGAGPIGLVTMLGAPRAFGAPRIVIVDVDDYRLSVAKEIGADNIVKVSTNLQDIAEEVEKIQKAMGTGIDVSFD  261 (365)
Q Consensus       182 g~~vlI~G~g~~G~~ai~~l~~~~g~~~vi~v~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~i~~~~~~~~~~~d~vid  261 (365)
                      +.+++|+|+|++|.+++. .+...| ..+.++.++.+|.+.+.+++.. ...++    ++            ..+|+||+
T Consensus       118 ~k~vlvlGaGGaaraia~-~L~~~G-~~v~V~nRt~~ka~~la~~~~~-~~~~~----~l------------~~~DiVIn  178 (269)
T 3phh_A          118 YQNALILGAGGSAKALAC-ELKKQG-LQVSVLNRSSRGLDFFQRLGCD-CFMEP----PK------------SAFDLIIN  178 (269)
T ss_dssp             CCEEEEECCSHHHHHHHH-HHHHTT-CEEEEECSSCTTHHHHHHHTCE-EESSC----CS------------SCCSEEEE
T ss_pred             CCEEEEECCCHHHHHHHH-HHHHCC-CEEEEEeCCHHHHHHHHHCCCe-EecHH----Hh------------ccCCEEEE
Confidence            889999999999999998 556778 5788888888776544377743 22221    11            27899999


Q ss_pred             CCCCHH----HH--HHHHHhcccCCEEEEEccCCCCccccchHhhhcCcE
Q 017868          262 CAGLNK----TM--STALGATCAGGKVCLVGMGHHEMTVPLTPAAVREVD  305 (365)
Q Consensus       262 ~~g~~~----~~--~~~~~~l~~~G~~~~~g~~~~~~~~~~~~~~~~~~~  305 (365)
                      |+....    .+  ......+.++..++.+...+  .+......-.++..
T Consensus       179 aTp~Gm~~~~~l~~~~l~~~l~~~~~v~D~vY~P--~T~ll~~A~~~G~~  226 (269)
T 3phh_A          179 ATSASLHNELPLNKEVLKGYFKEGKLAYDLAYGF--LTPFLSLAKELKTP  226 (269)
T ss_dssp             CCTTCCCCSCSSCHHHHHHHHHHCSEEEESCCSS--CCHHHHHHHHTTCC
T ss_pred             cccCCCCCCCCCChHHHHhhCCCCCEEEEeCCCC--chHHHHHHHHCcCE
Confidence            876321    11  11222567777777665433  33333344444443

>3tfw_A Putative O-methyltransferase; PSI-biology, nysgrc, structural genomics, NEW YORK structura genomics research consortium; 1.88A {Klebsiella pneumoniae subsp}

Probab=95.46  E-value=0.038  Score=46.89  Aligned_cols=102  Identities=18%  Similarity=0.209  Sum_probs=64.3

Q ss_pred             CCCCCCEEEEEcCCHHHHHHHHHHHHHCC-CCeEEEEeCChhHHHHHHH----cCCC-EEEeCCCCcccHHHHHHHHHHH
Q 017868          178 NIGPETNVLIMGAGPIGLVTMLGAPRAFG-APRIVIVDVDDYRLSVAKE----IGAD-NIVKVSTNLQDIAEEVEKIQKA  251 (365)
Q Consensus       178 ~~~~g~~vlI~G~g~~G~~ai~~l~~~~g-~~~vi~v~~~~~~~~~~~~----~g~~-~~~~~~~~~~~~~~~i~~~~~~  251 (365)
                      ...++.+||-.|+|. |..++. +++.++ ...+++++.+++..+.+++    .|.. .+....   .+..+.+....  
T Consensus        60 ~~~~~~~VLdiG~G~-G~~~~~-la~~~~~~~~v~~vD~s~~~~~~a~~~~~~~g~~~~v~~~~---~d~~~~l~~~~--  132 (248)
T 3tfw_A           60 RLTQAKRILEIGTLG-GYSTIW-MARELPADGQLLTLEADAHHAQVARENLQLAGVDQRVTLRE---GPALQSLESLG--  132 (248)
T ss_dssp             HHHTCSEEEEECCTT-SHHHHH-HHTTSCTTCEEEEEECCHHHHHHHHHHHHHTTCTTTEEEEE---SCHHHHHHTCC--
T ss_pred             hhcCCCEEEEecCCc-hHHHHH-HHHhCCCCCEEEEEECCHHHHHHHHHHHHHcCCCCcEEEEE---cCHHHHHHhcC--
Confidence            345778999999864 777777 666654 4589999999987766544    3543 121111   23322222110  


Q ss_pred             hCCCceEEEeCCCC---HHHHHHHHHhcccCCEEEEEc
Q 017868          252 MGTGIDVSFDCAGL---NKTMSTALGATCAGGKVCLVG  286 (365)
Q Consensus       252 ~~~~~d~vid~~g~---~~~~~~~~~~l~~~G~~~~~g  286 (365)
                      ....+|+|+-....   ...+..+.+.|+++|.++.-.
T Consensus       133 ~~~~fD~V~~d~~~~~~~~~l~~~~~~LkpGG~lv~~~  170 (248)
T 3tfw_A          133 ECPAFDLIFIDADKPNNPHYLRWALRYSRPGTLIIGDN  170 (248)
T ss_dssp             SCCCCSEEEECSCGGGHHHHHHHHHHTCCTTCEEEEEC
T ss_pred             CCCCeEEEEECCchHHHHHHHHHHHHhcCCCeEEEEeC
Confidence            12489999843322   346778889999999988754

>2p91_A Enoyl-[acyl-carrier-protein] reductase [NADH]; NADH-dependent enoyl-ACP reductase, FABI, aquifex A VF5, structural genomics, PSI; 2.00A {Aquifex aeolicus}

Probab=95.45  E-value=0.12  Score=44.75  Aligned_cols=81  Identities=19%  Similarity=0.206  Sum_probs=47.8

Q ss_pred             CCCEEEEEcC---CHHHHHHHHHHHHHCCCCeEEEEeCChh---HHHHH-HHcCCCEEEeCCCC-cccHHHHHHHHHHHh
Q 017868          181 PETNVLIMGA---GPIGLVTMLGAPRAFGAPRIVIVDVDDY---RLSVA-KEIGADNIVKVSTN-LQDIAEEVEKIQKAM  252 (365)
Q Consensus       181 ~g~~vlI~G~---g~~G~~ai~~l~~~~g~~~vi~v~~~~~---~~~~~-~~~g~~~~~~~~~~-~~~~~~~i~~~~~~~  252 (365)
                      .+.++||+|+   |++|.++++.++ ..|+ .|+.++++++   ..+.+ +..+....+..+-. .+++...++++.+. 
T Consensus        20 ~~k~vlVTGas~~~gIG~~ia~~l~-~~G~-~V~~~~r~~~~~~~~~~l~~~~~~~~~~~~Dl~~~~~v~~~~~~~~~~-   96 (285)
T 2p91_A           20 EGKRALITGVANERSIAYGIAKSFH-REGA-QLAFTYATPKLEKRVREIAKGFGSDLVVKCDVSLDEDIKNLKKFLEEN-   96 (285)
T ss_dssp             TTCEEEECCCSSTTSHHHHHHHHHH-HTTC-EEEEEESSGGGHHHHHHHHHHTTCCCEEECCTTCHHHHHHHHHHHHHH-
T ss_pred             CCCEEEEECCCCCCcHHHHHHHHHH-HcCC-EEEEEeCCHHHHHHHHHHHHhcCCeEEEEcCCCCHHHHHHHHHHHHHH-
Confidence            4678999985   589999999555 5598 5677767654   22222 33343223332222 23333334433332 


Q ss_pred             CCCceEEEeCCC
Q 017868          253 GTGIDVSFDCAG  264 (365)
Q Consensus       253 ~~~~d~vid~~g  264 (365)
                      -+++|++|.++|
T Consensus        97 ~g~iD~lv~~Ag  108 (285)
T 2p91_A           97 WGSLDIIVHSIA  108 (285)
T ss_dssp             TSCCCEEEECCC
T ss_pred             cCCCCEEEECCC
Confidence            358999999887

>3osu_A 3-oxoacyl-[acyl-carrier-protein] reductase; structural genomics, csgid, center for structural genomics O infectious diseases; 1.90A {Staphylococcus aureus subsp} SCOP: c.2.1.0 PDB: 3sj7_A*

Probab=95.42  E-value=0.08  Score=44.73  Aligned_cols=82  Identities=18%  Similarity=0.259  Sum_probs=47.5

Q ss_pred             CCCEEEEEcC-CHHHHHHHHHHHHHCCCCeEEEEeCChhHHHH----HHHcCCCEE-EeCCC-CcccHHHHHHHHHHHhC
Q 017868          181 PETNVLIMGA-GPIGLVTMLGAPRAFGAPRIVIVDVDDYRLSV----AKEIGADNI-VKVST-NLQDIAEEVEKIQKAMG  253 (365)
Q Consensus       181 ~g~~vlI~G~-g~~G~~ai~~l~~~~g~~~vi~v~~~~~~~~~----~~~~g~~~~-~~~~~-~~~~~~~~i~~~~~~~~  253 (365)
                      .+.++||+|+ +++|.++++.++ ..|+++++...++.++.+.    +++.+.... +..+- +.++....++++.+.. 
T Consensus         3 ~~k~~lVTGas~gIG~~ia~~l~-~~G~~V~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~Dv~d~~~v~~~~~~~~~~~-   80 (246)
T 3osu_A            3 MTKSALVTGASRGIGRSIALQLA-EEGYNVAVNYAGSKEKAEAVVEEIKAKGVDSFAIQANVADADEVKAMIKEVVSQF-   80 (246)
T ss_dssp             CSCEEEETTCSSHHHHHHHHHHH-HTTCEEEEEESSCHHHHHHHHHHHHHTTSCEEEEECCTTCHHHHHHHHHHHHHHH-
T ss_pred             CCCEEEEECCCChHHHHHHHHHH-HCCCEEEEEeCCCHHHHHHHHHHHHhcCCcEEEEEccCCCHHHHHHHHHHHHHHc-
Confidence            3578999987 999999999554 5699544444435444332    333444322 22222 2233334444443332 


Q ss_pred             CCceEEEeCCC
Q 017868          254 TGIDVSFDCAG  264 (365)
Q Consensus       254 ~~~d~vid~~g  264 (365)
                      +++|+++.++|
T Consensus        81 g~id~lv~nAg   91 (246)
T 3osu_A           81 GSLDVLVNNAG   91 (246)
T ss_dssp             SCCCEEEECCC
T ss_pred             CCCCEEEECCC
Confidence            58999999887

>3tsc_A Putative oxidoreductase; structural genomics, seattle structural genomics center for infectious disease, ssgcid, nucleotide; HET: NAD; 2.05A {Mycobacterium avium subsp} SCOP: c.2.1.0

Probab=95.42  E-value=0.13  Score=44.26  Aligned_cols=81  Identities=23%  Similarity=0.274  Sum_probs=48.0

Q ss_pred             CCCEEEEEcC-CHHHHHHHHHHHHHCCCCeEEEEeC-------------ChhHHH----HHHHcCCCE-EEeCCC-Cccc
Q 017868          181 PETNVLIMGA-GPIGLVTMLGAPRAFGAPRIVIVDV-------------DDYRLS----VAKEIGADN-IVKVST-NLQD  240 (365)
Q Consensus       181 ~g~~vlI~G~-g~~G~~ai~~l~~~~g~~~vi~v~~-------------~~~~~~----~~~~~g~~~-~~~~~~-~~~~  240 (365)
                      .+.++||+|+ +++|.++++.++ ..|+ +|+.+++             +.++.+    .++..+... .+..+- +.++
T Consensus        10 ~~k~~lVTGas~GIG~a~a~~la-~~G~-~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~D~~~~~~   87 (277)
T 3tsc_A           10 EGRVAFITGAARGQGRAHAVRMA-AEGA-DIIAVDIAGKLPSCVPYDPASPDDLSETVRLVEAANRRIVAAVVDTRDFDR   87 (277)
T ss_dssp             TTCEEEEESTTSHHHHHHHHHHH-HTTC-EEEEEECCSCCCTTCCSCCCCHHHHHHHHHHHHHTTCCEEEEECCTTCHHH
T ss_pred             CCCEEEEECCccHHHHHHHHHHH-HcCC-EEEEEeccccccccccccccCHHHHHHHHHHHHhcCCeEEEEECCCCCHHH
Confidence            5789999987 999999999555 5599 5677765             344332    223334332 222222 2233


Q ss_pred             HHHHHHHHHHHhCCCceEEEeCCC
Q 017868          241 IAEEVEKIQKAMGTGIDVSFDCAG  264 (365)
Q Consensus       241 ~~~~i~~~~~~~~~~~d~vid~~g  264 (365)
                      +.+.++++.+.. +++|++|.++|
T Consensus        88 v~~~~~~~~~~~-g~id~lvnnAg  110 (277)
T 3tsc_A           88 LRKVVDDGVAAL-GRLDIIVANAG  110 (277)
T ss_dssp             HHHHHHHHHHHH-SCCCEEEECCC
T ss_pred             HHHHHHHHHHHc-CCCCEEEECCC
Confidence            333444433322 57999999887

>3t7c_A Carveol dehydrogenase; structural genomics, seattle structural genomics center for infectious disease, ssgcid; HET: NAD; 1.95A {Mycobacterium avium}

Probab=95.41  E-value=0.14  Score=44.65  Aligned_cols=81  Identities=19%  Similarity=0.246  Sum_probs=48.4

Q ss_pred             CCCEEEEEcC-CHHHHHHHHHHHHHCCCCeEEEEeCC------------hhHHH----HHHHcCCCE-EEeCCC-CcccH
Q 017868          181 PETNVLIMGA-GPIGLVTMLGAPRAFGAPRIVIVDVD------------DYRLS----VAKEIGADN-IVKVST-NLQDI  241 (365)
Q Consensus       181 ~g~~vlI~G~-g~~G~~ai~~l~~~~g~~~vi~v~~~------------~~~~~----~~~~~g~~~-~~~~~~-~~~~~  241 (365)
                      .|.++||+|+ +++|.++++.++ ..|+ .|++++++            .++.+    .++..+... .+..+- +.++.
T Consensus        27 ~gk~~lVTGas~GIG~aia~~la-~~G~-~V~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~Dv~~~~~v  104 (299)
T 3t7c_A           27 EGKVAFITGAARGQGRSHAITLA-REGA-DIIAIDVCKQLDGVKLPMSTPDDLAETVRQVEALGRRIIASQVDVRDFDAM  104 (299)
T ss_dssp             TTCEEEEESTTSHHHHHHHHHHH-HTTC-EEEEEECCSCCTTCCSCCCCHHHHHHHHHHHHHTTCCEEEEECCTTCHHHH
T ss_pred             CCCEEEEECCCCHHHHHHHHHHH-HCCC-EEEEEecccccccccccccCHHHHHHHHHHHHhcCCceEEEECCCCCHHHH
Confidence            5789999987 999999999555 5599 56666654            33322    234445432 222222 22333


Q ss_pred             HHHHHHHHHHhCCCceEEEeCCC
Q 017868          242 AEEVEKIQKAMGTGIDVSFDCAG  264 (365)
Q Consensus       242 ~~~i~~~~~~~~~~~d~vid~~g  264 (365)
                      ...++++.+.. +++|++|.++|
T Consensus       105 ~~~~~~~~~~~-g~iD~lv~nAg  126 (299)
T 3t7c_A          105 QAAVDDGVTQL-GRLDIVLANAA  126 (299)
T ss_dssp             HHHHHHHHHHH-SCCCEEEECCC
T ss_pred             HHHHHHHHHHh-CCCCEEEECCC
Confidence            33444443332 58999999887

>1gee_A Glucose 1-dehydrogenase; short-chain dehydrogenase/reductase, oxidoreductase; HET: NAD; 1.60A {Bacillus megaterium} SCOP: c.2.1.2 PDB: 1rwb_A* 1gco_A* 1g6k_A* 3aus_A 3aut_A* 3auu_A*

Probab=95.40  E-value=0.081  Score=44.98  Aligned_cols=81  Identities=21%  Similarity=0.241  Sum_probs=47.6

Q ss_pred             CCCEEEEEcC-CHHHHHHHHHHHHHCCCCeEEEEeC-ChhHHHH----HHHcCCCE-EEeCCCC-cccHHHHHHHHHHHh
Q 017868          181 PETNVLIMGA-GPIGLVTMLGAPRAFGAPRIVIVDV-DDYRLSV----AKEIGADN-IVKVSTN-LQDIAEEVEKIQKAM  252 (365)
Q Consensus       181 ~g~~vlI~G~-g~~G~~ai~~l~~~~g~~~vi~v~~-~~~~~~~----~~~~g~~~-~~~~~~~-~~~~~~~i~~~~~~~  252 (365)
                      .+.++||+|+ |++|.++++.++ ..|+ .|+.+++ ++++.+.    +++.+... .+..+-. .+++.+.++++.+. 
T Consensus         6 ~~k~vlITGasggiG~~~a~~l~-~~G~-~V~~~~r~~~~~~~~~~~~l~~~~~~~~~~~~D~~~~~~~~~~~~~~~~~-   82 (261)
T 1gee_A            6 EGKVVVITGSSTGLGKSMAIRFA-TEKA-KVVVNYRSKEDEANSVLEEIKKVGGEAIAVKGDVTVESDVINLVQSAIKE-   82 (261)
T ss_dssp             TTCEEEETTCSSHHHHHHHHHHH-HTTC-EEEEEESSCHHHHHHHHHHHHHTTCEEEEEECCTTSHHHHHHHHHHHHHH-
T ss_pred             CCCEEEEeCCCChHHHHHHHHHH-HCCC-EEEEEcCCChHHHHHHHHHHHhcCCceEEEECCCCCHHHHHHHHHHHHHH-
Confidence            4678999987 999999999555 5598 5666767 6554432    22234322 2222222 22333334433332 


Q ss_pred             CCCceEEEeCCC
Q 017868          253 GTGIDVSFDCAG  264 (365)
Q Consensus       253 ~~~~d~vid~~g  264 (365)
                      -+++|++|.++|
T Consensus        83 ~g~id~li~~Ag   94 (261)
T 1gee_A           83 FGKLDVMINNAG   94 (261)
T ss_dssp             HSCCCEEEECCC
T ss_pred             cCCCCEEEECCC
Confidence            247999999887

>2h7i_A Enoyl-[acyl-carrier-protein] reductase [NADH]; oxidoreductase, INHA, enoyl acyl carrier reductase, pyrrolid carboxamide; HET: NAD 566; 1.62A {Mycobacterium tuberculosis} SCOP: c.2.1.2 PDB: 1p44_A* 1p45_A* 2b35_A* 2b36_A* 2b37_A* 2aq8_A* 2h7l_A* 2h7m_A* 2h7n_A* 2h7p_A* 2nsd_A* 2pr2_A* 2x22_A* 2x23_A* 3fne_A* 3fnf_A* 3fng_A* 3fnh_A* 3oew_A* 2aqh_A* ...

Probab=95.39  E-value=0.088  Score=45.15  Aligned_cols=82  Identities=20%  Similarity=0.357  Sum_probs=49.0

Q ss_pred             CCCEEEEEc---CCHHHHHHHHHHHHHCCCCeEEEEeCChhH--HHHHHHcCCC-EEEeCCC-CcccHHHHHHHHHHHhC
Q 017868          181 PETNVLIMG---AGPIGLVTMLGAPRAFGAPRIVIVDVDDYR--LSVAKEIGAD-NIVKVST-NLQDIAEEVEKIQKAMG  253 (365)
Q Consensus       181 ~g~~vlI~G---~g~~G~~ai~~l~~~~g~~~vi~v~~~~~~--~~~~~~~g~~-~~~~~~~-~~~~~~~~i~~~~~~~~  253 (365)
                      .+.++||+|   ++++|.++++.++ ..|+ .|+.+++++++  .+..++++.. ..+..+- +.+++...++++.+..+
T Consensus         6 ~~k~vlVTGa~~s~gIG~aia~~l~-~~G~-~V~~~~r~~~~~~~~~~~~~~~~~~~~~~Dv~~~~~v~~~~~~~~~~~g   83 (269)
T 2h7i_A            6 DGKRILVSGIITDSSIAFHIARVAQ-EQGA-QLVLTGFDRLRLIQRITDRLPAKAPLLELDVQNEEHLASLAGRVTEAIG   83 (269)
T ss_dssp             TTCEEEECCCSSTTSHHHHHHHHHH-HTTC-EEEEEECSCHHHHHHHHTTSSSCCCEEECCTTCHHHHHHHHHHHHHHHC
T ss_pred             CCCEEEEECCCCCCchHHHHHHHHH-HCCC-EEEEEecChHHHHHHHHHhcCCCceEEEccCCCHHHHHHHHHHHHHHhC
Confidence            467899997   4899999999554 5699 56777776654  3344445432 1222222 22333344444433333


Q ss_pred             --CCceEEEeCCC
Q 017868          254 --TGIDVSFDCAG  264 (365)
Q Consensus       254 --~~~d~vid~~g  264 (365)
                        .++|++|.++|
T Consensus        84 ~~~~iD~lv~nAg   96 (269)
T 2h7i_A           84 AGNKLDGVVHSIG   96 (269)
T ss_dssp             TTCCEEEEEECCC
T ss_pred             CCCCceEEEECCc
Confidence              27999999887

>4df3_A Fibrillarin-like rRNA/TRNA 2'-O-methyltransferase; NADP rossmann superfamily, S-adenosyl-L-M (SAM) binding, nucleolus; HET: SAM; 1.73A {Aeropyrum pernix}

Probab=95.38  E-value=0.065  Score=44.89  Aligned_cols=102  Identities=12%  Similarity=0.085  Sum_probs=64.7

Q ss_pred             HhcCCCCCCEEEEEcCCHHHHHHHHHHHHHCCC-CeEEEEeCChhHHHHHHHcCC--C--EEEeCCCCcccHHHHHHHHH
Q 017868          175 RRANIGPETNVLIMGAGPIGLVTMLGAPRAFGA-PRIVIVDVDDYRLSVAKEIGA--D--NIVKVSTNLQDIAEEVEKIQ  249 (365)
Q Consensus       175 ~~~~~~~g~~vlI~G~g~~G~~ai~~l~~~~g~-~~vi~v~~~~~~~~~~~~~g~--~--~~~~~~~~~~~~~~~i~~~~  249 (365)
                      +...++||++||=.|+|+ |..+.. +++..|. .+|++++.+++..+.+++.-.  .  ..+..+....+.   ..   
T Consensus        71 ~~l~ikpG~~VldlG~G~-G~~~~~-la~~VG~~G~V~avD~s~~~~~~l~~~a~~~~ni~~V~~d~~~p~~---~~---  142 (233)
T 4df3_A           71 IELPVKEGDRILYLGIAS-GTTASH-MSDIIGPRGRIYGVEFAPRVMRDLLTVVRDRRNIFPILGDARFPEK---YR---  142 (233)
T ss_dssp             SCCCCCTTCEEEEETCTT-SHHHHH-HHHHHCTTCEEEEEECCHHHHHHHHHHSTTCTTEEEEESCTTCGGG---GT---
T ss_pred             hhcCCCCCCEEEEecCcC-CHHHHH-HHHHhCCCceEEEEeCCHHHHHHHHHhhHhhcCeeEEEEeccCccc---cc---
Confidence            456799999999999864 666667 7777664 379999999988776544321  1  122222211111   00   


Q ss_pred             HHhCCCceEEEeCCCCH----HHHHHHHHhcccCCEEEEE
Q 017868          250 KAMGTGIDVSFDCAGLN----KTMSTALGATCAGGKVCLV  285 (365)
Q Consensus       250 ~~~~~~~d~vid~~g~~----~~~~~~~~~l~~~G~~~~~  285 (365)
                       .....+|+|+.....+    ..+..+.+.|+++|++++.
T Consensus       143 -~~~~~vDvVf~d~~~~~~~~~~l~~~~r~LKpGG~lvI~  181 (233)
T 4df3_A          143 -HLVEGVDGLYADVAQPEQAAIVVRNARFFLRDGGYMLMA  181 (233)
T ss_dssp             -TTCCCEEEEEECCCCTTHHHHHHHHHHHHEEEEEEEEEE
T ss_pred             -cccceEEEEEEeccCChhHHHHHHHHHHhccCCCEEEEE
Confidence             1135789887644432    2455677899999998864

>3h2s_A Putative NADH-flavin reductase; Q03B84, NESG, LCR19, structural genomics, PSI-2, protein structure initiative; HET: NDP; 1.78A {Lactobacillus casei atcc 334}

Probab=95.37  E-value=0.056  Score=44.70  Aligned_cols=91  Identities=12%  Similarity=0.137  Sum_probs=56.4

Q ss_pred             EEEEEcC-CHHHHHHHHHHHHHCCCCeEEEEeCChhHHHHHHHcCCCEEEeCCCCcccHHHHHHHHHHHhCCCceEEEeC
Q 017868          184 NVLIMGA-GPIGLVTMLGAPRAFGAPRIVIVDVDDYRLSVAKEIGADNIVKVSTNLQDIAEEVEKIQKAMGTGIDVSFDC  262 (365)
Q Consensus       184 ~vlI~G~-g~~G~~ai~~l~~~~g~~~vi~v~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~i~~~~~~~~~~~d~vid~  262 (365)
                      +|||+|+ |.+|..++..| ...|. .|+++.+++++.+.+..-++.. +..+-.+.+.    +.+     .++|+||.+
T Consensus         2 kilVtGatG~iG~~l~~~L-~~~g~-~V~~~~R~~~~~~~~~~~~~~~-~~~D~~d~~~----~~~-----~~~d~vi~~   69 (224)
T 3h2s_A            2 KIAVLGATGRAGSAIVAEA-RRRGH-EVLAVVRDPQKAADRLGATVAT-LVKEPLVLTE----ADL-----DSVDAVVDA   69 (224)
T ss_dssp             EEEEETTTSHHHHHHHHHH-HHTTC-EEEEEESCHHHHHHHTCTTSEE-EECCGGGCCH----HHH-----TTCSEEEEC
T ss_pred             EEEEEcCCCHHHHHHHHHH-HHCCC-EEEEEEecccccccccCCCceE-EecccccccH----hhc-----ccCCEEEEC
Confidence            6899997 99999999944 45588 6778888887766543334432 3222222222    222     579999999


Q ss_pred             CCCH----------HHHHHHHHhccc-CCEEEEEc
Q 017868          263 AGLN----------KTMSTALGATCA-GGKVCLVG  286 (365)
Q Consensus       263 ~g~~----------~~~~~~~~~l~~-~G~~~~~g  286 (365)
                      +|..          ......++.+.. +++++.++
T Consensus        70 ag~~~~~~~~~~n~~~~~~l~~a~~~~~~~~v~~S  104 (224)
T 3h2s_A           70 LSVPWGSGRGYLHLDFATHLVSLLRNSDTLAVFIL  104 (224)
T ss_dssp             CCCCTTSSCTHHHHHHHHHHHHTCTTCCCEEEEEC
T ss_pred             CccCCCcchhhHHHHHHHHHHHHHHHcCCcEEEEe
Confidence            9851          122345555543 36777775

>1e7w_A Pteridine reductase; dihydrofolate reductase, shortchain dehydrogenase, methotrexate resistance, oxidoreductase; HET: NDP MTX; 1.75A {Leishmania major} SCOP: c.2.1.2 PDB: 1w0c_A* 1e92_A* 2bf7_A* 2bfa_A* 2bfm_A* 2bfo_A* 2bfp_A* 2p8k_A* 3h4v_A* 2xox_A 1p33_A*

Probab=95.37  E-value=0.13  Score=44.65  Aligned_cols=81  Identities=19%  Similarity=0.118  Sum_probs=49.7

Q ss_pred             CCCEEEEEcC-CHHHHHHHHHHHHHCCCCeEEEEe-CChhHHHH-HH----HcCCCE-EEeCCC-Ccc------------
Q 017868          181 PETNVLIMGA-GPIGLVTMLGAPRAFGAPRIVIVD-VDDYRLSV-AK----EIGADN-IVKVST-NLQ------------  239 (365)
Q Consensus       181 ~g~~vlI~G~-g~~G~~ai~~l~~~~g~~~vi~v~-~~~~~~~~-~~----~~g~~~-~~~~~~-~~~------------  239 (365)
                      .+.++||+|+ +++|.++++.++ ..|+ +|+.++ +++++.+. .+    +.+... .+..+- +.+            
T Consensus         8 ~~k~~lVTGas~GIG~aia~~la-~~G~-~V~~~~~r~~~~~~~~~~~l~~~~~~~~~~~~~Dl~~~~~~~~~~~~~~~~   85 (291)
T 1e7w_A            8 TVPVALVTGAAKRLGRSIAEGLH-AEGY-AVCLHYHRSAAEANALSATLNARRPNSAITVQADLSNVATAPVSGADGSAP   85 (291)
T ss_dssp             CCCEEEETTCSSHHHHHHHHHHH-HTTC-EEEEEESSCHHHHHHHHHHHHHHSTTCEEEEECCCSSSCBCCCC----CCC
T ss_pred             CCCEEEEECCCchHHHHHHHHHH-HCCC-eEEEEcCCCHHHHHHHHHHHhhhcCCeeEEEEeecCCcccccccccccccc
Confidence            4678999987 999999999555 5599 577777 77765442 22    334322 222222 222            


Q ss_pred             -----cHHHHHHHHHHHhCCCceEEEeCCC
Q 017868          240 -----DIAEEVEKIQKAMGTGIDVSFDCAG  264 (365)
Q Consensus       240 -----~~~~~i~~~~~~~~~~~d~vid~~g  264 (365)
                           ++...+.++.+.. +++|++|.++|
T Consensus        86 ~~~~~~v~~~~~~~~~~~-g~iD~lvnnAg  114 (291)
T 1e7w_A           86 VTLFTRCAELVAACYTHW-GRCDVLVNNAS  114 (291)
T ss_dssp             BCHHHHHHHHHHHHHHHH-SCCCEEEECCC
T ss_pred             cchHHHHHHHHHHHHHhc-CCCCEEEECCC
Confidence                 4444444443332 57999999987

>1iy9_A Spermidine synthase; rossmann fold, structural genomics, PSI, protein structure initiative, northeast structural genomics consortium, NESG; 2.30A {Bacillus subtilis} SCOP: c.66.1.17

Probab=95.33  E-value=0.047  Score=47.19  Aligned_cols=97  Identities=16%  Similarity=0.106  Sum_probs=63.6

Q ss_pred             CCCEEEEEcCCHHHHHHHHHHHHHCCCCeEEEEeCChhHHHHHHHc------CC--CEEEeCCCCcccHHHHHHHHHHHh
Q 017868          181 PETNVLIMGAGPIGLVTMLGAPRAFGAPRIVIVDVDDYRLSVAKEI------GA--DNIVKVSTNLQDIAEEVEKIQKAM  252 (365)
Q Consensus       181 ~g~~vlI~G~g~~G~~ai~~l~~~~g~~~vi~v~~~~~~~~~~~~~------g~--~~~~~~~~~~~~~~~~i~~~~~~~  252 (365)
                      .+.+||+.|+|. |..+.. +++..+...+.+++.+++-.+.+++.      +.  +.+.....   |..+.+..    .
T Consensus        75 ~~~~VLdiG~G~-G~~~~~-l~~~~~~~~v~~vEid~~~v~~ar~~~~~~~~~~~~~rv~v~~~---D~~~~l~~----~  145 (275)
T 1iy9_A           75 NPEHVLVVGGGD-GGVIRE-ILKHPSVKKATLVDIDGKVIEYSKKFLPSIAGKLDDPRVDVQVD---DGFMHIAK----S  145 (275)
T ss_dssp             SCCEEEEESCTT-CHHHHH-HTTCTTCSEEEEEESCHHHHHHHHHHCHHHHTTTTSTTEEEEES---CSHHHHHT----C
T ss_pred             CCCEEEEECCch-HHHHHH-HHhCCCCceEEEEECCHHHHHHHHHHhHhhccccCCCceEEEEC---cHHHHHhh----C
Confidence            568999998754 556666 66666777899999999888877652      11  11211112   22222321    2


Q ss_pred             CCCceEEEeCCCC----------HHHHHHHHHhcccCCEEEEEc
Q 017868          253 GTGIDVSFDCAGL----------NKTMSTALGATCAGGKVCLVG  286 (365)
Q Consensus       253 ~~~~d~vid~~g~----------~~~~~~~~~~l~~~G~~~~~g  286 (365)
                      ...+|+|+-....          ...+..+.++|+++|.++...
T Consensus       146 ~~~fD~Ii~d~~~~~~~~~~l~~~~~~~~~~~~L~pgG~lv~~~  189 (275)
T 1iy9_A          146 ENQYDVIMVDSTEPVGPAVNLFTKGFYAGIAKALKEDGIFVAQT  189 (275)
T ss_dssp             CSCEEEEEESCSSCCSCCCCCSTTHHHHHHHHHEEEEEEEEEEC
T ss_pred             CCCeeEEEECCCCCCCcchhhhHHHHHHHHHHhcCCCcEEEEEc
Confidence            4689999863321          357888999999999998863

>3tl3_A Short-chain type dehydrogenase/reductase; ssgcid, seattle structural genomics center for infectious DI oxidoreductase; 1.85A {Mycobacterium ulcerans}

Probab=95.33  E-value=0.043  Score=46.74  Aligned_cols=79  Identities=18%  Similarity=0.365  Sum_probs=46.6

Q ss_pred             CCCEEEEEcC-CHHHHHHHHHHHHHCCCCeEEEEeCChhHHHHHHHcCCCE-EEeCCCC-cccHHHHHHHHHHHhCCCce
Q 017868          181 PETNVLIMGA-GPIGLVTMLGAPRAFGAPRIVIVDVDDYRLSVAKEIGADN-IVKVSTN-LQDIAEEVEKIQKAMGTGID  257 (365)
Q Consensus       181 ~g~~vlI~G~-g~~G~~ai~~l~~~~g~~~vi~v~~~~~~~~~~~~~g~~~-~~~~~~~-~~~~~~~i~~~~~~~~~~~d  257 (365)
                      .+.++||+|+ +++|.++++.+++ .|+ .|+.++++.+  +..++++... .+..+-. .++....++...+  .+++|
T Consensus         8 ~~k~vlVTGas~gIG~aia~~l~~-~G~-~V~~~~r~~~--~~~~~~~~~~~~~~~D~~~~~~v~~~~~~~~~--~g~id   81 (257)
T 3tl3_A            8 RDAVAVVTGGASGLGLATTKRLLD-AGA-QVVVLDIRGE--DVVADLGDRARFAAADVTDEAAVASALDLAET--MGTLR   81 (257)
T ss_dssp             --CEEEEETTTSHHHHHHHHHHHH-HTC-EEEEEESSCH--HHHHHTCTTEEEEECCTTCHHHHHHHHHHHHH--HSCEE
T ss_pred             cCCEEEEeCCCCHHHHHHHHHHHH-CCC-EEEEEeCchH--HHHHhcCCceEEEECCCCCHHHHHHHHHHHHH--hCCCC
Confidence            4678999987 9999999995654 499 5666666443  3344555432 2222222 2233333333322  35899


Q ss_pred             EEEeCCCC
Q 017868          258 VSFDCAGL  265 (365)
Q Consensus       258 ~vid~~g~  265 (365)
                      ++|.++|.
T Consensus        82 ~lv~nAg~   89 (257)
T 3tl3_A           82 IVVNCAGT   89 (257)
T ss_dssp             EEEECGGG
T ss_pred             EEEECCCC
Confidence            99999883

>3ajd_A Putative methyltransferase MJ0026; tRNA, M5C, rossmann fold, structural genomics, riken structu genomics/proteomics initiative; 1.27A {Methanocaldococcus jannaschii} PDB: 3a4t_A

Probab=95.32  E-value=0.093  Score=45.22  Aligned_cols=105  Identities=18%  Similarity=0.216  Sum_probs=62.5

Q ss_pred             hcCCCCCCEEEEEcCCHHHHHHHHHHHHHC-CCCeEEEEeCChhHHHHHH----HcCCCEEEeCCCCcccHHHHHHHHHH
Q 017868          176 RANIGPETNVLIMGAGPIGLVTMLGAPRAF-GAPRIVIVDVDDYRLSVAK----EIGADNIVKVSTNLQDIAEEVEKIQK  250 (365)
Q Consensus       176 ~~~~~~g~~vlI~G~g~~G~~ai~~l~~~~-g~~~vi~v~~~~~~~~~~~----~~g~~~~~~~~~~~~~~~~~i~~~~~  250 (365)
                      ...+++|++||=.|+|+ |..+.. ++..+ +...|++++.++++.+.++    .+|...+.....   |..+....+. 
T Consensus        78 ~l~~~~g~~VLDlgaG~-G~~t~~-la~~~~~~~~v~avD~~~~~l~~~~~~~~~~g~~~v~~~~~---D~~~~~~~~~-  151 (274)
T 3ajd_A           78 VLNPREDDFILDMCAAP-GGKTTH-LAQLMKNKGTIVAVEISKTRTKALKSNINRMGVLNTIIINA---DMRKYKDYLL-  151 (274)
T ss_dssp             HHCCCTTCEEEETTCTT-CHHHHH-HHHHTTTCSEEEEEESCHHHHHHHHHHHHHTTCCSEEEEES---CHHHHHHHHH-
T ss_pred             HhCCCCcCEEEEeCCCc-cHHHHH-HHHHcCCCCEEEEECCCHHHHHHHHHHHHHhCCCcEEEEeC---ChHhcchhhh-
Confidence            34678899988877643 445555 44443 4458999999998876543    456543322222   2222111110 


Q ss_pred             HhCCCceEEEe---CCCC---------------------HHHHHHHHHhcccCCEEEEEc
Q 017868          251 AMGTGIDVSFD---CAGL---------------------NKTMSTALGATCAGGKVCLVG  286 (365)
Q Consensus       251 ~~~~~~d~vid---~~g~---------------------~~~~~~~~~~l~~~G~~~~~g  286 (365)
                      .....+|.|+-   |.|.                     ...+..+.+.|+++|+++...
T Consensus       152 ~~~~~fD~Vl~d~Pcs~~g~~~~~p~~~~~~~~~~~~~~~~~l~~~~~~LkpgG~lv~st  211 (274)
T 3ajd_A          152 KNEIFFDKILLDAPCSGNIIKDKNRNVSEEDIKYCSLRQKELIDIGIDLLKKDGELVYST  211 (274)
T ss_dssp             HTTCCEEEEEEEECCC------------HHHHTGGGTCHHHHHHHHHHHEEEEEEEEEEE
T ss_pred             hccccCCEEEEcCCCCCCcccccCCCCCHHHHHHHHHHHHHHHHHHHHhCCCCCEEEEEE
Confidence            01467999975   3331                     345667888999999988754

>2axq_A Saccharopine dehydrogenase; rossmann fold variant, saccharopine reductase fold (domain II), alpha/beta protein; 1.70A {Saccharomyces cerevisiae}

Probab=95.32  E-value=0.084  Score=49.25  Aligned_cols=96  Identities=13%  Similarity=0.091  Sum_probs=58.1

Q ss_pred             CCCEEEEEcCCHHHHHHHHHHHHHCCCCeEEEEeCChhHHHHHH-HcCCCEEEeCCCCcccHHHHHHHHHHHhCCCceEE
Q 017868          181 PETNVLIMGAGPIGLVTMLGAPRAFGAPRIVIVDVDDYRLSVAK-EIGADNIVKVSTNLQDIAEEVEKIQKAMGTGIDVS  259 (365)
Q Consensus       181 ~g~~vlI~G~g~~G~~ai~~l~~~~g~~~vi~v~~~~~~~~~~~-~~g~~~~~~~~~~~~~~~~~i~~~~~~~~~~~d~v  259 (365)
                      ++.+|+|+|+|.+|.+++..+++..+. .|.+++++.++.+.+. ..+.. .+..+-  .+.. .+.+..    .++|+|
T Consensus        22 ~~k~VlIiGAGgiG~aia~~L~~~~g~-~V~v~~R~~~ka~~la~~~~~~-~~~~D~--~d~~-~l~~~l----~~~DvV   92 (467)
T 2axq_A           22 MGKNVLLLGSGFVAQPVIDTLAANDDI-NVTVACRTLANAQALAKPSGSK-AISLDV--TDDS-ALDKVL----ADNDVV   92 (467)
T ss_dssp             -CEEEEEECCSTTHHHHHHHHHTSTTE-EEEEEESSHHHHHHHHGGGTCE-EEECCT--TCHH-HHHHHH----HTSSEE
T ss_pred             CCCEEEEECChHHHHHHHHHHHhCCCC-eEEEEECCHHHHHHHHHhcCCc-EEEEec--CCHH-HHHHHH----cCCCEE
Confidence            456899999999999999945443366 5777888888765443 33432 222221  1222 233332    269999


Q ss_pred             EeCCCCHHHHHHHHHhcccCCEEEEE
Q 017868          260 FDCAGLNKTMSTALGATCAGGKVCLV  285 (365)
Q Consensus       260 id~~g~~~~~~~~~~~l~~~G~~~~~  285 (365)
                      |+|++..........++..+-.++..
T Consensus        93 In~tp~~~~~~v~~a~l~~g~~vvd~  118 (467)
T 2axq_A           93 ISLIPYTFHPNVVKSAIRTKTDVVTS  118 (467)
T ss_dssp             EECSCGGGHHHHHHHHHHHTCEEEEC
T ss_pred             EECCchhhhHHHHHHHHhcCCEEEEe
Confidence            99998653333344556666666654

>3h8v_A Ubiquitin-like modifier-activating enzyme 5; rossman fold, ATP-binding, UBL conjugation pathway, transfer structural genomics consortium, SGC; HET: ATP; 2.00A {Homo sapiens} PDB: 3guc_A*

Probab=95.31  E-value=0.11  Score=45.02  Aligned_cols=36  Identities=28%  Similarity=0.401  Sum_probs=29.6

Q ss_pred             CCCEEEEEcCCHHHHHHHHHHHHHCCCCeEEEEeCCh
Q 017868          181 PETNVLIMGAGPIGLVTMLGAPRAFGAPRIVIVDVDD  217 (365)
Q Consensus       181 ~g~~vlI~G~g~~G~~ai~~l~~~~g~~~vi~v~~~~  217 (365)
                      ...+|||.|+|++|..+++.|+ +.|..++..+|.+.
T Consensus        35 ~~~~VlVvGaGGlGs~va~~La-~aGVG~i~lvD~D~   70 (292)
T 3h8v_A           35 RTFAVAIVGVGGVGSVTAEMLT-RCGIGKLLLFDYDK   70 (292)
T ss_dssp             GGCEEEEECCSHHHHHHHHHHH-HHTCSEEEEECCCB
T ss_pred             hCCeEEEECcCHHHHHHHHHHH-HcCCCEEEEECCCc
Confidence            4569999999999999999554 55998898887654

>4hp8_A 2-deoxy-D-gluconate 3-dehydrogenase; enzyme function initiative, EFI, structural genomics, oxidor; HET: NAP; 1.35A {Agrobacterium tumefaciens}

Probab=95.30  E-value=0.022  Score=48.25  Aligned_cols=77  Identities=19%  Similarity=0.258  Sum_probs=48.7

Q ss_pred             CCCEEEEEcC-CHHHHHHHHHHHHHCCCCeEEEEeCCh--hHHHHHHHcCCCEE-EeCCCCcccHHHHHHHHHHHhCCCc
Q 017868          181 PETNVLIMGA-GPIGLVTMLGAPRAFGAPRIVIVDVDD--YRLSVAKEIGADNI-VKVSTNLQDIAEEVEKIQKAMGTGI  256 (365)
Q Consensus       181 ~g~~vlI~G~-g~~G~~ai~~l~~~~g~~~vi~v~~~~--~~~~~~~~~g~~~~-~~~~~~~~~~~~~i~~~~~~~~~~~  256 (365)
                      .|+++||+|+ +++|.++++.++ ..|+ +|+.++++.  +..+.+++.|.... +..+-.+++-   +++..+  .+++
T Consensus         8 ~GKvalVTGas~GIG~aiA~~la-~~Ga-~Vvi~~r~~~~~~~~~~~~~g~~~~~~~~Dv~d~~~---v~~~~~--~g~i   80 (247)
T 4hp8_A            8 EGRKALVTGANTGLGQAIAVGLA-AAGA-EVVCAARRAPDETLDIIAKDGGNASALLIDFADPLA---AKDSFT--DAGF   80 (247)
T ss_dssp             TTCEEEETTTTSHHHHHHHHHHH-HTTC-EEEEEESSCCHHHHHHHHHTTCCEEEEECCTTSTTT---TTTSST--TTCC
T ss_pred             CCCEEEEeCcCCHHHHHHHHHHH-HcCC-EEEEEeCCcHHHHHHHHHHhCCcEEEEEccCCCHHH---HHHHHH--hCCC
Confidence            5788999987 999999999554 6699 566666653  44566677775432 2222211111   222211  3679


Q ss_pred             eEEEeCCC
Q 017868          257 DVSFDCAG  264 (365)
Q Consensus       257 d~vid~~g  264 (365)
                      |+.++++|
T Consensus        81 DiLVNNAG   88 (247)
T 4hp8_A           81 DILVNNAG   88 (247)
T ss_dssp             CEEEECCC
T ss_pred             CEEEECCC
Confidence            99999988

>3ppi_A 3-hydroxyacyl-COA dehydrogenase type-2; ssgcid, dehydrogenas mycobacterium avium, structural genomics; 2.00A {Mycobacterium avium}

Probab=95.30  E-value=0.13  Score=44.40  Aligned_cols=78  Identities=18%  Similarity=0.246  Sum_probs=49.0

Q ss_pred             CCCEEEEEcC-CHHHHHHHHHHHHHCCCCeEEEEeCChhHHHH-HHHcCCCE-EEeCCCC-cccHHHHHHHHHHHhCCCc
Q 017868          181 PETNVLIMGA-GPIGLVTMLGAPRAFGAPRIVIVDVDDYRLSV-AKEIGADN-IVKVSTN-LQDIAEEVEKIQKAMGTGI  256 (365)
Q Consensus       181 ~g~~vlI~G~-g~~G~~ai~~l~~~~g~~~vi~v~~~~~~~~~-~~~~g~~~-~~~~~~~-~~~~~~~i~~~~~~~~~~~  256 (365)
                      .+.++||+|+ +++|.++++.++ ..|+ +|+.++++.++.+. .++++... .+..+-. .+++.+.++++ + ..+++
T Consensus        29 ~~k~vlVTGas~GIG~aia~~l~-~~G~-~Vi~~~r~~~~~~~~~~~~~~~~~~~~~Dl~~~~~v~~~~~~~-~-~~~~i  104 (281)
T 3ppi_A           29 EGASAIVSGGAGGLGEATVRRLH-ADGL-GVVIADLAAEKGKALADELGNRAEFVSTNVTSEDSVLAAIEAA-N-QLGRL  104 (281)
T ss_dssp             TTEEEEEETTTSHHHHHHHHHHH-HTTC-EEEEEESCHHHHHHHHHHHCTTEEEEECCTTCHHHHHHHHHHH-T-TSSEE
T ss_pred             CCCEEEEECCCChHHHHHHHHHH-HCCC-EEEEEeCChHHHHHHHHHhCCceEEEEcCCCCHHHHHHHHHHH-H-HhCCC
Confidence            4678999987 999999999555 5599 57788888877654 45565432 2222222 22233333333 2 13578


Q ss_pred             eEEEeC
Q 017868          257 DVSFDC  262 (365)
Q Consensus       257 d~vid~  262 (365)
                      |++|.+
T Consensus       105 d~lv~~  110 (281)
T 3ppi_A          105 RYAVVA  110 (281)
T ss_dssp             EEEEEC
T ss_pred             CeEEEc
Confidence            999987

>2qhx_A Pteridine reductase 1; oxidoreductase, short-chain dehydrogenase/reductase, trypanosomatid, pterin salvage, drug resistance; HET: NAP FE1; 2.61A {Leishmania major} SCOP: c.2.1.2

Probab=95.29  E-value=0.12  Score=45.76  Aligned_cols=82  Identities=17%  Similarity=0.087  Sum_probs=49.8

Q ss_pred             CCCEEEEEcC-CHHHHHHHHHHHHHCCCCeEEEEe-CChhHHHHH-H----HcCCCE-EEeCCCC-cc------------
Q 017868          181 PETNVLIMGA-GPIGLVTMLGAPRAFGAPRIVIVD-VDDYRLSVA-K----EIGADN-IVKVSTN-LQ------------  239 (365)
Q Consensus       181 ~g~~vlI~G~-g~~G~~ai~~l~~~~g~~~vi~v~-~~~~~~~~~-~----~~g~~~-~~~~~~~-~~------------  239 (365)
                      .+.++||+|+ +++|.++++.++ ..|+ .|+.++ +++++.+.+ +    +.+... .+..+-. .+            
T Consensus        45 ~~k~~lVTGas~GIG~aia~~La-~~G~-~Vv~~~~r~~~~~~~~~~~l~~~~~~~~~~~~~Dl~d~~~~~~~~~~~~~~  122 (328)
T 2qhx_A           45 TVPVALVTGAAKRLGRSIAEGLH-AEGY-AVCLHYHRSAAEANALSATLNARRPNSAITVQADLSNVATAPVSGADGSAP  122 (328)
T ss_dssp             CCCEEEETTCSSHHHHHHHHHHH-HTTC-EEEEEESSCHHHHHHHHHHHHHHSTTCEEEEECCCSSSCBCC-------CC
T ss_pred             CCCEEEEECCCCHHHHHHHHHHH-HCCC-EEEEEcCCCHHHHHHHHHHHHhhcCCeEEEEEeeCCCchhccccccccccc
Confidence            4678999987 999999999554 5699 577777 777655432 2    234222 2222222 22            


Q ss_pred             -----cHHHHHHHHHHHhCCCceEEEeCCCC
Q 017868          240 -----DIAEEVEKIQKAMGTGIDVSFDCAGL  265 (365)
Q Consensus       240 -----~~~~~i~~~~~~~~~~~d~vid~~g~  265 (365)
                           ++...+.++.+.. +++|++|.++|.
T Consensus       123 ~~~~~~v~~~~~~~~~~~-g~iD~lVnnAG~  152 (328)
T 2qhx_A          123 VTLFTRCAELVAACYTHW-GRCDVLVNNASS  152 (328)
T ss_dssp             BCHHHHHHHHHHHHHHHH-SCCCEEEECCCC
T ss_pred             cccHHHHHHHHHHHHHhc-CCCCEEEECCCC
Confidence                 3444444443332 579999998873

>3orf_A Dihydropteridine reductase; alpha-beta-alpha sandwich, rossmann fold, oxidoreductase (AC NADH), NADH binding, oxidoreductase; HET: NAD; 2.16A {Dictyostelium discoideum}

Probab=95.28  E-value=0.073  Score=45.14  Aligned_cols=74  Identities=18%  Similarity=0.269  Sum_probs=45.9

Q ss_pred             CCCEEEEEcC-CHHHHHHHHHHHHHCCCCeEEEEeCChhHHHHHHHcCCCEEEeCC-CCcccHHHHHHHHHHHhCCCceE
Q 017868          181 PETNVLIMGA-GPIGLVTMLGAPRAFGAPRIVIVDVDDYRLSVAKEIGADNIVKVS-TNLQDIAEEVEKIQKAMGTGIDV  258 (365)
Q Consensus       181 ~g~~vlI~G~-g~~G~~ai~~l~~~~g~~~vi~v~~~~~~~~~~~~~g~~~~~~~~-~~~~~~~~~i~~~~~~~~~~~d~  258 (365)
                      -+.++||+|+ +++|.++++.++ ..|+ .|+++++++++.+      . ..+.++ .+.++....++++.+ ..+++|+
T Consensus        21 m~k~vlITGas~gIG~~la~~l~-~~G~-~V~~~~r~~~~~~------~-~~~~~d~~d~~~v~~~~~~~~~-~~g~iD~   90 (251)
T 3orf_A           21 MSKNILVLGGSGALGAEVVKFFK-SKSW-NTISIDFRENPNA------D-HSFTIKDSGEEEIKSVIEKINS-KSIKVDT   90 (251)
T ss_dssp             -CCEEEEETTTSHHHHHHHHHHH-HTTC-EEEEEESSCCTTS------S-EEEECSCSSHHHHHHHHHHHHT-TTCCEEE
T ss_pred             cCCEEEEECCCCHHHHHHHHHHH-HCCC-EEEEEeCCccccc------c-cceEEEeCCHHHHHHHHHHHHH-HcCCCCE
Confidence            3678999987 999999999454 5699 5777777765432      1 112222 222333334444332 2358999


Q ss_pred             EEeCCC
Q 017868          259 SFDCAG  264 (365)
Q Consensus       259 vid~~g  264 (365)
                      +|.++|
T Consensus        91 li~~Ag   96 (251)
T 3orf_A           91 FVCAAG   96 (251)
T ss_dssp             EEECCC
T ss_pred             EEECCc
Confidence            999988

>4fb5_A Probable oxidoreductase protein; PSI-biology, nysgrc, structural genomics, NEW YORK structura genomics research consortium, GFO/IDH/MOCA family; 2.61A {Rhizobium etli}

Probab=95.28  E-value=0.12  Score=46.94  Aligned_cols=130  Identities=16%  Similarity=0.124  Sum_probs=79.8

Q ss_pred             CEEEEEcCCHHHHHHHHHHHHH-------CCCCeEEEEeCChhHHH-HHHHcCCCEEEeCCCCcccHHHHHHHHHHHhCC
Q 017868          183 TNVLIMGAGPIGLVTMLGAPRA-------FGAPRIVIVDVDDYRLS-VAKEIGADNIVKVSTNLQDIAEEVEKIQKAMGT  254 (365)
Q Consensus       183 ~~vlI~G~g~~G~~ai~~l~~~-------~g~~~vi~v~~~~~~~~-~~~~~g~~~~~~~~~~~~~~~~~i~~~~~~~~~  254 (365)
                      =+|.|+|+|.+|..-+..+.+.       -+++.+.++++++++.+ +++++|.....      .++.+.+.      ..
T Consensus        26 irvgiIG~G~ig~~H~~a~~~~~~~~~~~~~~~lvav~d~~~~~a~~~a~~~g~~~~y------~d~~ell~------~~   93 (393)
T 4fb5_A           26 LGIGLIGTGYMGKCHALAWNAVKTVFGDVERPRLVHLAEANAGLAEARAGEFGFEKAT------ADWRALIA------DP   93 (393)
T ss_dssp             CEEEEECCSHHHHHHHHHHTTHHHHHCSSCCCEEEEEECC--TTHHHHHHHHTCSEEE------SCHHHHHH------CT
T ss_pred             ccEEEEcCCHHHHHHHHHHHhhhhhhccCCCcEEEEEECCCHHHHHHHHHHhCCCeec------CCHHHHhc------CC
Confidence            4789999999998655422111       24555666677776654 66889987654      24444432      46


Q ss_pred             CceEEEeCCCCHHHHHHHHHhcccCCEEEEEccCCCCccccchH-------hhhcCcEEE-ee-cccCCcHHHHHHHHHc
Q 017868          255 GIDVSFDCAGLNKTMSTALGATCAGGKVCLVGMGHHEMTVPLTP-------AAVREVDVV-GV-FRYKNTWPLCLELLRS  325 (365)
Q Consensus       255 ~~d~vid~~g~~~~~~~~~~~l~~~G~~~~~g~~~~~~~~~~~~-------~~~~~~~i~-~~-~~~~~~~~~~~~~l~~  325 (365)
                      .+|+|+-|+....+.+.+..+|.. |+-+++.   .+.......       .-.+++.+. +. ..+...++.+.+++++
T Consensus        94 ~iDaV~IatP~~~H~~~a~~al~a-GkhVl~E---KPla~~~~ea~~l~~~a~~~g~~l~vg~~~R~~p~~~~~k~~i~~  169 (393)
T 4fb5_A           94 EVDVVSVTTPNQFHAEMAIAALEA-GKHVWCE---KPMAPAYADAERMLATAERSGKVAALGYNYIQNPVMRHIRKLVGD  169 (393)
T ss_dssp             TCCEEEECSCGGGHHHHHHHHHHT-TCEEEEC---SCSCSSHHHHHHHHHHHHHSSSCEEECCGGGGCHHHHHHHHHHHT
T ss_pred             CCcEEEECCChHHHHHHHHHHHhc-CCeEEEc---cCCcccHHHHHHhhhhHHhcCCccccccccccChHHHHHHHHHHc
Confidence            799999999988788888888885 5556653   222222221       112233222 22 2336678889999999


Q ss_pred             CCC
Q 017868          326 GKI  328 (365)
Q Consensus       326 g~~  328 (365)
                      |.+
T Consensus       170 G~i  172 (393)
T 4fb5_A          170 GVI  172 (393)
T ss_dssp             TTT
T ss_pred             CCC
Confidence            887

>1u2z_A Histone-lysine N-methyltransferase, H3 lysine-79 specific; histone methyltransferase, nucleosome; HET: SAH; 2.20A {Saccharomyces cerevisiae} SCOP: c.66.1.31

Probab=95.27  E-value=0.21  Score=45.96  Aligned_cols=108  Identities=15%  Similarity=0.101  Sum_probs=66.4

Q ss_pred             HHHhcCCCCCCEEEEEcCCHHHHHHHHHHHHHCCCCeEEEEeCChhHHHHH-----------HHcC--CCEEEeCCCCcc
Q 017868          173 ACRRANIGPETNVLIMGAGPIGLVTMLGAPRAFGAPRIVIVDVDDYRLSVA-----------KEIG--ADNIVKVSTNLQ  239 (365)
Q Consensus       173 ~~~~~~~~~g~~vlI~G~g~~G~~ai~~l~~~~g~~~vi~v~~~~~~~~~~-----------~~~g--~~~~~~~~~~~~  239 (365)
                      .++...++++++||=.|+|. |..++. +++..|...|++++.++...+.+           +.+|  ...+.....+..
T Consensus       234 ml~~l~l~~g~~VLDLGCGs-G~la~~-LA~~~g~~~V~GVDis~~~l~~A~~Ml~~ar~~~~~~Gl~~~nV~~i~gD~~  311 (433)
T 1u2z_A          234 VYQQCQLKKGDTFMDLGSGV-GNCVVQ-AALECGCALSFGCEIMDDASDLTILQYEELKKRCKLYGMRLNNVEFSLKKSF  311 (433)
T ss_dssp             HHHHTTCCTTCEEEEESCTT-SHHHHH-HHHHHCCSEEEEEECCHHHHHHHHHHHHHHHHHHHHTTBCCCCEEEEESSCS
T ss_pred             HHHhcCCCCCCEEEEeCCCc-CHHHHH-HHHHCCCCEEEEEeCCHHHHHHHHHhHHHHHHHHHHcCCCCCceEEEEcCcc
Confidence            34566788999999998864 777777 77766876899999998754433           4456  233222111111


Q ss_pred             cHHHHHHHHHHHhCCCceEEEeC--CCCH---HHHHHHHHhcccCCEEEEEc
Q 017868          240 DIAEEVEKIQKAMGTGIDVSFDC--AGLN---KTMSTALGATCAGGKVCLVG  286 (365)
Q Consensus       240 ~~~~~i~~~~~~~~~~~d~vid~--~g~~---~~~~~~~~~l~~~G~~~~~g  286 (365)
                      .....+...    ...+|+|+-.  ...+   ..+..+.+.|++||++++..
T Consensus       312 ~~~~~~~~~----~~~FDvIvvn~~l~~~d~~~~L~el~r~LKpGG~lVi~d  359 (433)
T 1u2z_A          312 VDNNRVAEL----IPQCDVILVNNFLFDEDLNKKVEKILQTAKVGCKIISLK  359 (433)
T ss_dssp             TTCHHHHHH----GGGCSEEEECCTTCCHHHHHHHHHHHTTCCTTCEEEESS
T ss_pred             ccccccccc----cCCCCEEEEeCccccccHHHHHHHHHHhCCCCeEEEEee
Confidence            000011111    2579999952  2222   23457888999999998864

>3afn_B Carbonyl reductase; alpha/beta/alpha, rossmann-fold, oxidoreductase; HET: NAP; 1.63A {Sphingomonas SP} PDB: 3afm_A*

Probab=95.27  E-value=0.079  Score=44.89  Aligned_cols=82  Identities=23%  Similarity=0.264  Sum_probs=48.0

Q ss_pred             CCCEEEEEcC-CHHHHHHHHHHHHHCCCCeEEEEeCC-hhHHH-HHH---HcCCCE-EEeCCC-CcccHHHHHHHHHHHh
Q 017868          181 PETNVLIMGA-GPIGLVTMLGAPRAFGAPRIVIVDVD-DYRLS-VAK---EIGADN-IVKVST-NLQDIAEEVEKIQKAM  252 (365)
Q Consensus       181 ~g~~vlI~G~-g~~G~~ai~~l~~~~g~~~vi~v~~~-~~~~~-~~~---~~g~~~-~~~~~~-~~~~~~~~i~~~~~~~  252 (365)
                      .+.++||+|+ |++|.+++..++ ..|+ .|+.++++ +++.+ ..+   ..+... .+..+- +.+++.+.++++.+..
T Consensus         6 ~~k~vlVTGasggiG~~~a~~l~-~~G~-~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~D~~~~~~~~~~~~~~~~~~   83 (258)
T 3afn_B            6 KGKRVLITGSSQGIGLATARLFA-RAGA-KVGLHGRKAPANIDETIASMRADGGDAAFFAADLATSEACQQLVDEFVAKF   83 (258)
T ss_dssp             TTCEEEETTCSSHHHHHHHHHHH-HTTC-EEEEEESSCCTTHHHHHHHHHHTTCEEEEEECCTTSHHHHHHHHHHHHHHH
T ss_pred             CCCEEEEeCCCChHHHHHHHHHH-HCCC-EEEEECCCchhhHHHHHHHHHhcCCceEEEECCCCCHHHHHHHHHHHHHHc
Confidence            4678999987 999999999555 5698 56667666 44433 222   224321 222222 2233333444333322


Q ss_pred             CCCceEEEeCCCC
Q 017868          253 GTGIDVSFDCAGL  265 (365)
Q Consensus       253 ~~~~d~vid~~g~  265 (365)
                       +++|++|.++|.
T Consensus        84 -g~id~vi~~Ag~   95 (258)
T 3afn_B           84 -GGIDVLINNAGG   95 (258)
T ss_dssp             -SSCSEEEECCCC
T ss_pred             -CCCCEEEECCCC
Confidence             489999998874

>2nm0_A Probable 3-oxacyl-(acyl-carrier-protein) reductas; oxidoreductase; 1.99A {Streptomyces coelicolor}

Probab=95.25  E-value=0.062  Score=45.71  Aligned_cols=76  Identities=18%  Similarity=0.225  Sum_probs=46.3

Q ss_pred             CCCEEEEEcC-CHHHHHHHHHHHHHCCCCeEEEEeCChhHHHHHHHcCCCEEEeCCC-CcccHHHHHHHHHHHhCCCceE
Q 017868          181 PETNVLIMGA-GPIGLVTMLGAPRAFGAPRIVIVDVDDYRLSVAKEIGADNIVKVST-NLQDIAEEVEKIQKAMGTGIDV  258 (365)
Q Consensus       181 ~g~~vlI~G~-g~~G~~ai~~l~~~~g~~~vi~v~~~~~~~~~~~~~g~~~~~~~~~-~~~~~~~~i~~~~~~~~~~~d~  258 (365)
                      .+.++||+|+ |++|.++++.++ ..|+ .|+.+++++++.+.      ...+..+- +.+++.+.+++..+. -+++|+
T Consensus        20 ~~k~vlVTGas~gIG~aia~~l~-~~G~-~V~~~~r~~~~~~~------~~~~~~Dl~d~~~v~~~~~~~~~~-~g~iD~   90 (253)
T 2nm0_A           20 MSRSVLVTGGNRGIGLAIARAFA-DAGD-KVAITYRSGEPPEG------FLAVKCDITDTEQVEQAYKEIEET-HGPVEV   90 (253)
T ss_dssp             CCCEEEEETTTSHHHHHHHHHHH-HTTC-EEEEEESSSCCCTT------SEEEECCTTSHHHHHHHHHHHHHH-TCSCSE
T ss_pred             CCCEEEEeCCCCHHHHHHHHHHH-HCCC-EEEEEeCChHhhcc------ceEEEecCCCHHHHHHHHHHHHHH-cCCCCE
Confidence            4678999987 999999999454 5698 56666666544221      22232222 223333344443332 357999


Q ss_pred             EEeCCCC
Q 017868          259 SFDCAGL  265 (365)
Q Consensus       259 vid~~g~  265 (365)
                      +|.++|.
T Consensus        91 lv~nAg~   97 (253)
T 2nm0_A           91 LIANAGV   97 (253)
T ss_dssp             EEEECSC
T ss_pred             EEECCCC
Confidence            9998773

>2dtx_A Glucose 1-dehydrogenase related protein; rossmann fold, oxidoreductase; HET: BMA; 1.60A {Thermoplasma acidophilum} PDB: 2dtd_A* 2dte_A* 2zk7_A

Probab=95.25  E-value=0.092  Score=44.91  Aligned_cols=75  Identities=20%  Similarity=0.279  Sum_probs=45.8

Q ss_pred             CCCEEEEEcC-CHHHHHHHHHHHHHCCCCeEEEEeCChhHHHHHHHcCCCEEEeCCC-CcccHHHHHHHHHHHhCCCceE
Q 017868          181 PETNVLIMGA-GPIGLVTMLGAPRAFGAPRIVIVDVDDYRLSVAKEIGADNIVKVST-NLQDIAEEVEKIQKAMGTGIDV  258 (365)
Q Consensus       181 ~g~~vlI~G~-g~~G~~ai~~l~~~~g~~~vi~v~~~~~~~~~~~~~g~~~~~~~~~-~~~~~~~~i~~~~~~~~~~~d~  258 (365)
                      .+.++||+|+ |++|.++++.++ ..|+ .|+.+++++++     .-.+ ..+..+- +.+++...++++.+.. +++|+
T Consensus         7 ~~k~vlVTGas~gIG~~ia~~l~-~~G~-~V~~~~r~~~~-----~~~~-~~~~~Dl~~~~~v~~~~~~~~~~~-g~iD~   77 (264)
T 2dtx_A            7 RDKVVIVTGASMGIGRAIAERFV-DEGS-KVIDLSIHDPG-----EAKY-DHIECDVTNPDQVKASIDHIFKEY-GSISV   77 (264)
T ss_dssp             TTCEEEEESCSSHHHHHHHHHHH-HTTC-EEEEEESSCCC-----SCSS-EEEECCTTCHHHHHHHHHHHHHHH-SCCCE
T ss_pred             CCCEEEEeCCCCHHHHHHHHHHH-HCCC-EEEEEecCccc-----CCce-EEEEecCCCHHHHHHHHHHHHHHc-CCCCE
Confidence            4678999987 999999999454 5698 56777666554     1112 2222222 2233333444443322 47999


Q ss_pred             EEeCCC
Q 017868          259 SFDCAG  264 (365)
Q Consensus       259 vid~~g  264 (365)
                      +|.++|
T Consensus        78 lv~~Ag   83 (264)
T 2dtx_A           78 LVNNAG   83 (264)
T ss_dssp             EEECCC
T ss_pred             EEECCC
Confidence            999887

>3m4x_A NOL1/NOP2/SUN family protein; mtase domain, PUA domain, RRM motif, transferase; 2.28A {Enterococcus faecium}

Probab=95.24  E-value=0.12  Score=47.98  Aligned_cols=100  Identities=19%  Similarity=0.251  Sum_probs=62.0

Q ss_pred             cCCCCCCEEEEEcCCHHHHHHHHHHHHHC-CCCeEEEEeCChhHHHHH----HHcCCCEEEeCCCCcccHHHHHHHHHHH
Q 017868          177 ANIGPETNVLIMGAGPIGLVTMLGAPRAF-GAPRIVIVDVDDYRLSVA----KEIGADNIVKVSTNLQDIAEEVEKIQKA  251 (365)
Q Consensus       177 ~~~~~g~~vlI~G~g~~G~~ai~~l~~~~-g~~~vi~v~~~~~~~~~~----~~~g~~~~~~~~~~~~~~~~~i~~~~~~  251 (365)
                      ..+++|++||=.|+|+ |..+++ ++..+ +...|++++.++++.+.+    +.+|...+.....+..++   ...    
T Consensus       101 L~~~~g~~VLDlcaGp-Ggkt~~-lA~~~~~~g~V~AvDis~~rl~~~~~n~~r~g~~nv~v~~~Da~~l---~~~----  171 (456)
T 3m4x_A          101 AAAKPGEKVLDLCAAP-GGKSTQ-LAAQMKGKGLLVTNEIFPKRAKILSENIERWGVSNAIVTNHAPAEL---VPH----  171 (456)
T ss_dssp             HCCCTTCEEEESSCTT-CHHHHH-HHHHHTTCSEEEEECSSHHHHHHHHHHHHHHTCSSEEEECCCHHHH---HHH----
T ss_pred             cCCCCCCEEEEECCCc-CHHHHH-HHHHcCCCCEEEEEeCCHHHHHHHHHHHHHcCCCceEEEeCCHHHh---hhh----
Confidence            4678999988876543 334444 33332 334799999999887654    456776444333322221   111    


Q ss_pred             hCCCceEEEe---CCCCH-------------------------HHHHHHHHhcccCCEEEEE
Q 017868          252 MGTGIDVSFD---CAGLN-------------------------KTMSTALGATCAGGKVCLV  285 (365)
Q Consensus       252 ~~~~~d~vid---~~g~~-------------------------~~~~~~~~~l~~~G~~~~~  285 (365)
                      ....+|.|+-   |+|..                         ..+..++++|+++|+++..
T Consensus       172 ~~~~FD~Il~DaPCSg~G~~rr~p~~~~~~~~~~~~~l~~~Q~~iL~~a~~~LkpGG~LvYs  233 (456)
T 3m4x_A          172 FSGFFDRIVVDAPCSGEGMFRKDPNAIKEWTEESPLYCQKRQQEILSSAIKMLKNKGQLIYS  233 (456)
T ss_dssp             HTTCEEEEEEECCCCCGGGTTTCHHHHHHCCTTHHHHHHHHHHHHHHHHHHTEEEEEEEEEE
T ss_pred             ccccCCEEEECCCCCCccccccCHHHhhhcCHHHHHHHHHHHHHHHHHHHHhcCCCcEEEEE
Confidence            1568999975   44422                         3566788899999998864

>3dhn_A NAD-dependent epimerase/dehydratase; reductase, PF01370, Q89Z24_bactn, NESG, BTR310, structural genomics, PSI-2; 2.00A {Bacteroides thetaiotaomicron}

Probab=95.22  E-value=0.07  Score=44.27  Aligned_cols=94  Identities=16%  Similarity=0.264  Sum_probs=55.0

Q ss_pred             CEEEEEcC-CHHHHHHHHHHHHHCCCCeEEEEeCChhHHHHHHHcCCCEEEeCCCCcccHHHHHHHHHHHhCCCceEEEe
Q 017868          183 TNVLIMGA-GPIGLVTMLGAPRAFGAPRIVIVDVDDYRLSVAKEIGADNIVKVSTNLQDIAEEVEKIQKAMGTGIDVSFD  261 (365)
Q Consensus       183 ~~vlI~G~-g~~G~~ai~~l~~~~g~~~vi~v~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~i~~~~~~~~~~~d~vid  261 (365)
                      .+|||+|+ |.+|..+++ .+...|. .|+++++++++.+.+.  .....+..  +-.+. +.+.+..    .++|+||.
T Consensus         5 ~~ilItGatG~iG~~l~~-~L~~~g~-~V~~~~r~~~~~~~~~--~~~~~~~~--Dl~d~-~~~~~~~----~~~d~vi~   73 (227)
T 3dhn_A            5 KKIVLIGASGFVGSALLN-EALNRGF-EVTAVVRHPEKIKIEN--EHLKVKKA--DVSSL-DEVCEVC----KGADAVIS   73 (227)
T ss_dssp             CEEEEETCCHHHHHHHHH-HHHTTTC-EEEEECSCGGGCCCCC--TTEEEECC--CTTCH-HHHHHHH----TTCSEEEE
T ss_pred             CEEEEEcCCchHHHHHHH-HHHHCCC-EEEEEEcCcccchhcc--CceEEEEe--cCCCH-HHHHHHh----cCCCEEEE
Confidence            58999997 999999999 5556687 6888888776542211  11112222  22232 2333332    36999999


Q ss_pred             CCCCH-----------HHHHHHHHhcccC--CEEEEEcc
Q 017868          262 CAGLN-----------KTMSTALGATCAG--GKVCLVGM  287 (365)
Q Consensus       262 ~~g~~-----------~~~~~~~~~l~~~--G~~~~~g~  287 (365)
                      ++|..           ......++.+...  .+++.++.
T Consensus        74 ~a~~~~~~~~~~~~n~~~~~~l~~~~~~~~~~~~v~~Ss  112 (227)
T 3dhn_A           74 AFNPGWNNPDIYDETIKVYLTIIDGVKKAGVNRFLMVGG  112 (227)
T ss_dssp             CCCC------CCSHHHHHHHHHHHHHHHTTCSEEEEECC
T ss_pred             eCcCCCCChhHHHHHHHHHHHHHHHHHHhCCCEEEEeCC
Confidence            98853           1222344444433  47887764

>1vbf_A 231AA long hypothetical protein-L-isoaspartate O- methyltransferase; trimeric coiled coil assembly; 2.80A {Sulfolobus tokodaii} SCOP: c.66.1.7

Probab=95.22  E-value=0.068  Score=44.52  Aligned_cols=100  Identities=16%  Similarity=0.131  Sum_probs=65.9

Q ss_pred             HHHhcCCCCCCEEEEEcCCHHHHHHHHHHHHHCCCCeEEEEeCChhHHHHHHHcCC----CEEEeCCCCcccHHHHHHHH
Q 017868          173 ACRRANIGPETNVLIMGAGPIGLVTMLGAPRAFGAPRIVIVDVDDYRLSVAKEIGA----DNIVKVSTNLQDIAEEVEKI  248 (365)
Q Consensus       173 ~~~~~~~~~g~~vlI~G~g~~G~~ai~~l~~~~g~~~vi~v~~~~~~~~~~~~~g~----~~~~~~~~~~~~~~~~i~~~  248 (365)
                      .++...+.++++||-.|+|. |..+.. +++. + ..+++++.+++..+.+++...    ..++.  .+..+   ...  
T Consensus        62 ~~~~~~~~~~~~vLdiG~G~-G~~~~~-l~~~-~-~~v~~vD~~~~~~~~a~~~~~~~~~v~~~~--~d~~~---~~~--  130 (231)
T 1vbf_A           62 MLDELDLHKGQKVLEIGTGI-GYYTAL-IAEI-V-DKVVSVEINEKMYNYASKLLSYYNNIKLIL--GDGTL---GYE--  130 (231)
T ss_dssp             HHHHTTCCTTCEEEEECCTT-SHHHHH-HHHH-S-SEEEEEESCHHHHHHHHHHHTTCSSEEEEE--SCGGG---CCG--
T ss_pred             HHHhcCCCCCCEEEEEcCCC-CHHHHH-HHHH-c-CEEEEEeCCHHHHHHHHHHHhhcCCeEEEE--CCccc---ccc--
Confidence            34556788999999999875 777777 6665 4 489999999998887766421    11222  11111   000  


Q ss_pred             HHHhCCCceEEEeCCCCHHHHHHHHHhcccCCEEEEEc
Q 017868          249 QKAMGTGIDVSFDCAGLNKTMSTALGATCAGGKVCLVG  286 (365)
Q Consensus       249 ~~~~~~~~d~vid~~g~~~~~~~~~~~l~~~G~~~~~g  286 (365)
                         ....+|+|+...........+.+.|+++|.++..-
T Consensus       131 ---~~~~fD~v~~~~~~~~~~~~~~~~L~pgG~l~~~~  165 (231)
T 1vbf_A          131 ---EEKPYDRVVVWATAPTLLCKPYEQLKEGGIMILPI  165 (231)
T ss_dssp             ---GGCCEEEEEESSBBSSCCHHHHHTEEEEEEEEEEE
T ss_pred             ---cCCCccEEEECCcHHHHHHHHHHHcCCCcEEEEEE
Confidence               13679999976543333457788999999988764

>2hq1_A Glucose/ribitol dehydrogenase; CTH-1438, structural genomics, southeast collaboratory for structural genomics, secsg, PSI; 1.90A {Clostridium thermocellum}

Probab=95.21  E-value=0.11  Score=43.73  Aligned_cols=82  Identities=21%  Similarity=0.270  Sum_probs=46.1

Q ss_pred             CCCEEEEEcC-CHHHHHHHHHHHHHCCCCeEEEE-eCChhHHH----HHHHcCCCE-EEeCCCC-cccHHHHHHHHHHHh
Q 017868          181 PETNVLIMGA-GPIGLVTMLGAPRAFGAPRIVIV-DVDDYRLS----VAKEIGADN-IVKVSTN-LQDIAEEVEKIQKAM  252 (365)
Q Consensus       181 ~g~~vlI~G~-g~~G~~ai~~l~~~~g~~~vi~v-~~~~~~~~----~~~~~g~~~-~~~~~~~-~~~~~~~i~~~~~~~  252 (365)
                      ++.++||+|+ |++|.++++.++ ..|+ .|+.+ .+++++.+    .+++.+... .+..+-. .+++.+.+++..+. 
T Consensus         4 ~~~~vlItGasggiG~~~a~~l~-~~G~-~V~~~~~r~~~~~~~~~~~~~~~~~~~~~~~~D~~~~~~~~~~~~~~~~~-   80 (247)
T 2hq1_A            4 KGKTAIVTGSSRGLGKAIAWKLG-NMGA-NIVLNGSPASTSLDATAEEFKAAGINVVVAKGDVKNPEDVENMVKTAMDA-   80 (247)
T ss_dssp             TTCEEEESSCSSHHHHHHHHHHH-HTTC-EEEEEECTTCSHHHHHHHHHHHTTCCEEEEESCTTSHHHHHHHHHHHHHH-
T ss_pred             CCcEEEEECCCchHHHHHHHHHH-HCCC-EEEEEcCcCHHHHHHHHHHHHhcCCcEEEEECCCCCHHHHHHHHHHHHHh-
Confidence            4678999987 999999999554 5698 46665 55544432    223334322 2222222 22333333333332 


Q ss_pred             CCCceEEEeCCCC
Q 017868          253 GTGIDVSFDCAGL  265 (365)
Q Consensus       253 ~~~~d~vid~~g~  265 (365)
                      .+++|++|.++|.
T Consensus        81 ~~~~d~vi~~Ag~   93 (247)
T 2hq1_A           81 FGRIDILVNNAGI   93 (247)
T ss_dssp             HSCCCEEEECC--
T ss_pred             cCCCCEEEECCCC
Confidence            2479999998874

>3g0o_A 3-hydroxyisobutyrate dehydrogenase; NAD(P), valine catabolism, tartaric acid, target 11128H, NYSGXRC, PSI-2, structural genomics; HET: TLA; 1.80A {Salmonella typhimurium}

Probab=95.21  E-value=0.28  Score=42.86  Aligned_cols=73  Identities=14%  Similarity=0.058  Sum_probs=51.2

Q ss_pred             CEEEEEcCCHHHHHHHHHHHHHCCCCeEEEEeCChhHHHHHHHcCCCE-EEeCCCCcccHHHHHHHHHHHhCCCceEEEe
Q 017868          183 TNVLIMGAGPIGLVTMLGAPRAFGAPRIVIVDVDDYRLSVAKEIGADN-IVKVSTNLQDIAEEVEKIQKAMGTGIDVSFD  261 (365)
Q Consensus       183 ~~vlI~G~g~~G~~ai~~l~~~~g~~~vi~v~~~~~~~~~~~~~g~~~-~~~~~~~~~~~~~~i~~~~~~~~~~~d~vid  261 (365)
                      .+|.|+|+|.+|...+. .+...|. .|.+.++++++.+.+.+.|+.. .-+.    .+.           -...|+||-
T Consensus         8 ~~I~iIG~G~mG~~~a~-~l~~~G~-~V~~~dr~~~~~~~~~~~g~~~~~~~~----~e~-----------~~~aDvvi~   70 (303)
T 3g0o_A            8 FHVGIVGLGSMGMGAAR-SCLRAGL-STWGADLNPQACANLLAEGACGAAASA----REF-----------AGVVDALVI   70 (303)
T ss_dssp             CEEEEECCSHHHHHHHH-HHHHTTC-EEEEECSCHHHHHHHHHTTCSEEESSS----TTT-----------TTTCSEEEE
T ss_pred             CeEEEECCCHHHHHHHH-HHHHCCC-eEEEEECCHHHHHHHHHcCCccccCCH----HHH-----------HhcCCEEEE
Confidence            57999999999999988 4456688 6888899999998888878754 2111    111           145688888


Q ss_pred             CCCCHHHHHHH
Q 017868          262 CAGLNKTMSTA  272 (365)
Q Consensus       262 ~~g~~~~~~~~  272 (365)
                      |+..+......
T Consensus        71 ~vp~~~~~~~v   81 (303)
T 3g0o_A           71 LVVNAAQVRQV   81 (303)
T ss_dssp             CCSSHHHHHHH
T ss_pred             ECCCHHHHHHH
Confidence            77765444444

>1ej0_A FTSJ; methyltransferase, adoMet, adenosyl methionine, heat shock proteins, 23S ribosomal RNA; HET: SAM; 1.50A {Escherichia coli} SCOP: c.66.1.2 PDB: 1eiz_A*

Probab=95.20  E-value=0.1  Score=40.99  Aligned_cols=101  Identities=14%  Similarity=0.180  Sum_probs=60.0

Q ss_pred             CCCCCCEEEEEcCCHHHHHHHHHHHHHCCC-CeEEEEeCChhHHHHHHHcCCCEEEeCCCCcccHHHHHHHHHHHhCCCc
Q 017868          178 NIGPETNVLIMGAGPIGLVTMLGAPRAFGA-PRIVIVDVDDYRLSVAKEIGADNIVKVSTNLQDIAEEVEKIQKAMGTGI  256 (365)
Q Consensus       178 ~~~~g~~vlI~G~g~~G~~ai~~l~~~~g~-~~vi~v~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~i~~~~~~~~~~~  256 (365)
                      .++++++||-.|+|. |..+.. +++..|. ..+++++.++ ..+.    .-...+..+....+..+.+...  .....+
T Consensus        19 ~~~~~~~vLd~G~G~-G~~~~~-l~~~~~~~~~v~~~D~~~-~~~~----~~~~~~~~d~~~~~~~~~~~~~--~~~~~~   89 (180)
T 1ej0_A           19 LFKPGMTVVDLGAAP-GGWSQY-VVTQIGGKGRIIACDLLP-MDPI----VGVDFLQGDFRDELVMKALLER--VGDSKV   89 (180)
T ss_dssp             CCCTTCEEEEESCTT-CHHHHH-HHHHHCTTCEEEEEESSC-CCCC----TTEEEEESCTTSHHHHHHHHHH--HTTCCE
T ss_pred             CCCCCCeEEEeCCCC-CHHHHH-HHHHhCCCCeEEEEECcc-cccc----CcEEEEEcccccchhhhhhhcc--CCCCce
Confidence            368899999999865 666777 6666542 4799998877 3221    1112222222111111112211  124689


Q ss_pred             eEEEe-----CCCC------------HHHHHHHHHhcccCCEEEEEcc
Q 017868          257 DVSFD-----CAGL------------NKTMSTALGATCAGGKVCLVGM  287 (365)
Q Consensus       257 d~vid-----~~g~------------~~~~~~~~~~l~~~G~~~~~g~  287 (365)
                      |+|+.     ..+.            ...+..+.+.|+++|.++....
T Consensus        90 D~i~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~L~~gG~l~~~~~  137 (180)
T 1ej0_A           90 QVVMSDMAPNMSGTPAVDIPRAMYLVELALEMCRDVLAPGGSFVVKVF  137 (180)
T ss_dssp             EEEEECCCCCCCSCHHHHHHHHHHHHHHHHHHHHHHEEEEEEEEEEEE
T ss_pred             eEEEECCCccccCCCccchHHHHHHHHHHHHHHHHHcCCCcEEEEEEe
Confidence            99997     2232            2566778899999999987643

>3duw_A OMT, O-methyltransferase, putative; alternating of alpha and beta with complex SAH; HET: SAH; 1.20A {Bacillus cereus} PDB: 3dul_A*

Probab=95.19  E-value=0.12  Score=42.81  Aligned_cols=104  Identities=16%  Similarity=0.189  Sum_probs=64.4

Q ss_pred             CCCCCCEEEEEcCCHHHHHHHHHHHHHCC-CCeEEEEeCChhHHHHHH----HcCCCE-EEeCCCCcccHHHHHHHHHHH
Q 017868          178 NIGPETNVLIMGAGPIGLVTMLGAPRAFG-APRIVIVDVDDYRLSVAK----EIGADN-IVKVSTNLQDIAEEVEKIQKA  251 (365)
Q Consensus       178 ~~~~g~~vlI~G~g~~G~~ai~~l~~~~g-~~~vi~v~~~~~~~~~~~----~~g~~~-~~~~~~~~~~~~~~i~~~~~~  251 (365)
                      ...++.+||-.|+|. |..++. +++..+ ...+++++.+++..+.++    ..|... +....   .+..+.+..+...
T Consensus        55 ~~~~~~~vLdiG~G~-G~~~~~-la~~~~~~~~v~~vD~~~~~~~~a~~~~~~~~~~~~v~~~~---~d~~~~~~~~~~~  129 (223)
T 3duw_A           55 QIQGARNILEIGTLG-GYSTIW-LARGLSSGGRVVTLEASEKHADIARSNIERANLNDRVEVRT---GLALDSLQQIENE  129 (223)
T ss_dssp             HHHTCSEEEEECCTT-SHHHHH-HHTTCCSSCEEEEEESCHHHHHHHHHHHHHTTCTTTEEEEE---SCHHHHHHHHHHT
T ss_pred             HhhCCCEEEEecCCc-cHHHHH-HHHhCCCCCEEEEEECCHHHHHHHHHHHHHcCCCCcEEEEE---cCHHHHHHHHHhc
Confidence            345778999998863 666777 666653 338999999998776554    345432 21111   2333333333221


Q ss_pred             hCCCceEEEeCCCC---HHHHHHHHHhcccCCEEEEEc
Q 017868          252 MGTGIDVSFDCAGL---NKTMSTALGATCAGGKVCLVG  286 (365)
Q Consensus       252 ~~~~~d~vid~~g~---~~~~~~~~~~l~~~G~~~~~g  286 (365)
                      ....+|+|+-....   ...+..+.+.|+++|.++.-.
T Consensus       130 ~~~~fD~v~~d~~~~~~~~~l~~~~~~L~pgG~lv~~~  167 (223)
T 3duw_A          130 KYEPFDFIFIDADKQNNPAYFEWALKLSRPGTVIIGDN  167 (223)
T ss_dssp             TCCCCSEEEECSCGGGHHHHHHHHHHTCCTTCEEEEES
T ss_pred             CCCCcCEEEEcCCcHHHHHHHHHHHHhcCCCcEEEEeC
Confidence            12579999854322   346678889999999887654

>1vl5_A Unknown conserved protein BH2331; putative methyltransferase, structural genomics, joint cente structural genomics, JCSG; HET: MSE; 1.95A {Bacillus halodurans} SCOP: c.66.1.41

Probab=95.17  E-value=0.069  Score=45.44  Aligned_cols=100  Identities=19%  Similarity=0.204  Sum_probs=64.9

Q ss_pred             HhcCCCCCCEEEEEcCCHHHHHHHHHHHHHCCCCeEEEEeCChhHHHHHHHc----CCCEEEeCCCCcccHHHHHHHHHH
Q 017868          175 RRANIGPETNVLIMGAGPIGLVTMLGAPRAFGAPRIVIVDVDDYRLSVAKEI----GADNIVKVSTNLQDIAEEVEKIQK  250 (365)
Q Consensus       175 ~~~~~~~g~~vlI~G~g~~G~~ai~~l~~~~g~~~vi~v~~~~~~~~~~~~~----g~~~~~~~~~~~~~~~~~i~~~~~  250 (365)
                      +....+++.+||-.|+| .|..+.. +++. +. .+++++.+++..+.+++.    +...+.....+..++.        
T Consensus        31 ~~l~~~~~~~vLDiGcG-~G~~~~~-l~~~-~~-~v~gvD~s~~~l~~a~~~~~~~~~~~v~~~~~d~~~l~--------   98 (260)
T 1vl5_A           31 QIAALKGNEEVLDVATG-GGHVANA-FAPF-VK-KVVAFDLTEDILKVARAFIEGNGHQQVEYVQGDAEQMP--------   98 (260)
T ss_dssp             HHHTCCSCCEEEEETCT-TCHHHHH-HGGG-SS-EEEEEESCHHHHHHHHHHHHHTTCCSEEEEECCC-CCC--------
T ss_pred             HHhCCCCCCEEEEEeCC-CCHHHHH-HHHh-CC-EEEEEeCCHHHHHHHHHHHHhcCCCceEEEEecHHhCC--------
Confidence            34466789999999986 3767777 6655 44 799999999877766543    4322111111111110        


Q ss_pred             HhCCCceEEEeCCCC------HHHHHHHHHhcccCCEEEEEc
Q 017868          251 AMGTGIDVSFDCAGL------NKTMSTALGATCAGGKVCLVG  286 (365)
Q Consensus       251 ~~~~~~d~vid~~g~------~~~~~~~~~~l~~~G~~~~~g  286 (365)
                      .....+|+|+....-      ...+..+.++|+++|.+++..
T Consensus        99 ~~~~~fD~V~~~~~l~~~~d~~~~l~~~~r~LkpgG~l~~~~  140 (260)
T 1vl5_A           99 FTDERFHIVTCRIAAHHFPNPASFVSEAYRVLKKGGQLLLVD  140 (260)
T ss_dssp             SCTTCEEEEEEESCGGGCSCHHHHHHHHHHHEEEEEEEEEEE
T ss_pred             CCCCCEEEEEEhhhhHhcCCHHHHHHHHHHHcCCCCEEEEEE
Confidence            013689999975432      357778999999999998864

>3uwp_A Histone-lysine N-methyltransferase, H3 lysine-79; epigenetics, tubercidin, structu genomics, structural genomics consortium, SGC; HET: 5ID; 2.05A {Homo sapiens} PDB: 4eqz_A* 3sx0_A* 4er0_A* 4er7_A* 1nw3_A* 4er6_A* 4er5_A* 3qow_A* 3qox_A* 4ek9_A* 4ekg_A* 4eki_A* 4er3_A* 3sr4_A*

Probab=95.16  E-value=0.21  Score=45.51  Aligned_cols=105  Identities=12%  Similarity=0.075  Sum_probs=66.6

Q ss_pred             HHhcCCCCCCEEEEEcCCHHHHHHHHHHHHHCCCCeEEEEeCChhHHHHHH-----------HcCC--CEEEeCCCCccc
Q 017868          174 CRRANIGPETNVLIMGAGPIGLVTMLGAPRAFGAPRIVIVDVDDYRLSVAK-----------EIGA--DNIVKVSTNLQD  240 (365)
Q Consensus       174 ~~~~~~~~g~~vlI~G~g~~G~~ai~~l~~~~g~~~vi~v~~~~~~~~~~~-----------~~g~--~~~~~~~~~~~~  240 (365)
                      +...+++++++||=+|+|. |..+++ +++..|+..+++++.++.-.++++           .+|.  ..+-....+-.+
T Consensus       166 l~~l~l~~gd~VLDLGCGt-G~l~l~-lA~~~g~~kVvGIDiS~~~lelAr~n~e~frkr~~~~Gl~~~rVefi~GD~~~  243 (438)
T 3uwp_A          166 IDEIKMTDDDLFVDLGSGV-GQVVLQ-VAAATNCKHHYGVEKADIPAKYAETMDREFRKWMKWYGKKHAEYTLERGDFLS  243 (438)
T ss_dssp             HHHHCCCTTCEEEEESCTT-SHHHHH-HHHHCCCSEEEEEECCHHHHHHHHHHHHHHHHHHHHHTBCCCEEEEEECCTTS
T ss_pred             HHhcCCCCCCEEEEeCCCC-CHHHHH-HHHHCCCCEEEEEeCCHHHHHHHHHHHHHHHHHHHHhCCCCCCeEEEECcccC
Confidence            4667899999998898864 777888 777789877999999986544443           3343  333222222222


Q ss_pred             HHHHHHHHHHHhCCCceEEEeCC--CCH---HHHHHHHHhcccCCEEEEEc
Q 017868          241 IAEEVEKIQKAMGTGIDVSFDCA--GLN---KTMSTALGATCAGGKVCLVG  286 (365)
Q Consensus       241 ~~~~i~~~~~~~~~~~d~vid~~--g~~---~~~~~~~~~l~~~G~~~~~g  286 (365)
                      ..  ..+.    -..+|+|+-..  -.+   ..+...++.|++||++++..
T Consensus       244 lp--~~d~----~~~aDVVf~Nn~~F~pdl~~aL~Ei~RvLKPGGrIVssE  288 (438)
T 3uwp_A          244 EE--WRER----IANTSVIFVNNFAFGPEVDHQLKERFANMKEGGRIVSSK  288 (438)
T ss_dssp             HH--HHHH----HHTCSEEEECCTTCCHHHHHHHHHHHTTSCTTCEEEESS
T ss_pred             Cc--cccc----cCCccEEEEcccccCchHHHHHHHHHHcCCCCcEEEEee
Confidence            21  1111    03689998521  112   34456778899999999874

>1oaa_A Sepiapterin reductase; tetrahydrobiopterin, oxidoreductase; HET: NAP; 1.25A {Mus musculus} SCOP: c.2.1.2 PDB: 1nas_A* 1sep_A* 1z6z_A*

Probab=95.15  E-value=0.11  Score=44.24  Aligned_cols=83  Identities=11%  Similarity=0.147  Sum_probs=47.9

Q ss_pred             CCCEEEEEcC-CHHHHHHHHHHHHH--CCCCeEEEEeCChhHHHH-HHHc-----CCC-EEEeCCCC-cccHHHHHHHHH
Q 017868          181 PETNVLIMGA-GPIGLVTMLGAPRA--FGAPRIVIVDVDDYRLSV-AKEI-----GAD-NIVKVSTN-LQDIAEEVEKIQ  249 (365)
Q Consensus       181 ~g~~vlI~G~-g~~G~~ai~~l~~~--~g~~~vi~v~~~~~~~~~-~~~~-----g~~-~~~~~~~~-~~~~~~~i~~~~  249 (365)
                      .+.++||+|+ +++|.+++..+++.  .|+ +|+.+++++++.+. .+++     +.. ..+..+-. .++..+.+.++.
T Consensus         5 ~~k~~lVTGas~gIG~~ia~~l~~~~~~G~-~V~~~~r~~~~~~~~~~~l~~~~~~~~~~~~~~Dv~~~~~v~~~~~~~~   83 (259)
T 1oaa_A            5 GCAVCVLTGASRGFGRALAPQLARLLSPGS-VMLVSARSESMLRQLKEELGAQQPDLKVVLAAADLGTEAGVQRLLSAVR   83 (259)
T ss_dssp             BSEEEEESSCSSHHHHHHHHHHHTTBCTTC-EEEEEESCHHHHHHHHHHHHHHCTTSEEEEEECCTTSHHHHHHHHHHHH
T ss_pred             CCcEEEEeCCCChHHHHHHHHHHHhhcCCC-eEEEEeCCHHHHHHHHHHHHhhCCCCeEEEEecCCCCHHHHHHHHHHHH
Confidence            3568899987 99999999966653  698 67777888766543 2333     322 12222222 223333333332


Q ss_pred             HH-hCCCce--EEEeCCC
Q 017868          250 KA-MGTGID--VSFDCAG  264 (365)
Q Consensus       250 ~~-~~~~~d--~vid~~g  264 (365)
                      +. ..+++|  ++|.++|
T Consensus        84 ~~~~~g~~d~~~lvnnAg  101 (259)
T 1oaa_A           84 ELPRPEGLQRLLLINNAA  101 (259)
T ss_dssp             HSCCCTTCCEEEEEECCC
T ss_pred             hccccccCCccEEEECCc
Confidence            20 124677  9999876

>1pjz_A Thiopurine S-methyltransferase; polymorphism, S-adenosylmethionine, drug metabolism; NMR {Pseudomonas syringae PV} SCOP: c.66.1.36

Probab=95.15  E-value=0.17  Score=41.32  Aligned_cols=98  Identities=12%  Similarity=0.054  Sum_probs=61.1

Q ss_pred             HhcCCCCCCEEEEEcCCHHHHHHHHHHHHHCCCCeEEEEeCChhHHHHHHHc-CC-----------------CEEEeCCC
Q 017868          175 RRANIGPETNVLIMGAGPIGLVTMLGAPRAFGAPRIVIVDVDDYRLSVAKEI-GA-----------------DNIVKVST  236 (365)
Q Consensus       175 ~~~~~~~g~~vlI~G~g~~G~~ai~~l~~~~g~~~vi~v~~~~~~~~~~~~~-g~-----------------~~~~~~~~  236 (365)
                      ....+.++.+||..|+|. |..+.. +++. |+ .|+++|.+++-.+.+++. +.                 ...+.  .
T Consensus        16 ~~l~~~~~~~vLD~GCG~-G~~~~~-la~~-g~-~V~gvD~S~~~l~~a~~~~~~~~~~~~~~~~~~~~~~~v~~~~--~   89 (203)
T 1pjz_A           16 SSLNVVPGARVLVPLCGK-SQDMSW-LSGQ-GY-HVVGAELSEAAVERYFTERGEQPHITSQGDFKVYAAPGIEIWC--G   89 (203)
T ss_dssp             HHHCCCTTCEEEETTTCC-SHHHHH-HHHH-CC-EEEEEEECHHHHHHHHHHHCSCSEEEEETTEEEEECSSSEEEE--E
T ss_pred             HhcccCCCCEEEEeCCCC-cHhHHH-HHHC-CC-eEEEEeCCHHHHHHHHHHccCCcccccccccccccCCccEEEE--C
Confidence            444567889999998864 666667 6665 88 799999999988877553 21                 11111  1


Q ss_pred             CcccHHHHHHHHHHHhCCCceEEEeCCC-----C---HHHHHHHHHhcccCCEEEEE
Q 017868          237 NLQDIAEEVEKIQKAMGTGIDVSFDCAG-----L---NKTMSTALGATCAGGKVCLV  285 (365)
Q Consensus       237 ~~~~~~~~i~~~~~~~~~~~d~vid~~g-----~---~~~~~~~~~~l~~~G~~~~~  285 (365)
                      +..++..  ..     ...+|+|++...     .   ...+..+.++|+++|+++++
T Consensus        90 d~~~l~~--~~-----~~~fD~v~~~~~l~~l~~~~~~~~l~~~~r~LkpgG~~~l~  139 (203)
T 1pjz_A           90 DFFALTA--RD-----IGHCAAFYDRAAMIALPADMRERYVQHLEALMPQACSGLLI  139 (203)
T ss_dssp             CCSSSTH--HH-----HHSEEEEEEESCGGGSCHHHHHHHHHHHHHHSCSEEEEEEE
T ss_pred             ccccCCc--cc-----CCCEEEEEECcchhhCCHHHHHHHHHHHHHHcCCCcEEEEE
Confidence            1112110  00     147999997322     1   12456788899999994443

>1yb2_A Hypothetical protein TA0852; structural genomics, methyltransferase, thermoplasma acidoph midwest center for structural genomics, MCSG; 2.01A {Thermoplasma acidophilum} SCOP: c.66.1.13

Probab=95.14  E-value=0.068  Score=46.07  Aligned_cols=101  Identities=16%  Similarity=0.204  Sum_probs=65.3

Q ss_pred             HhcCCCCCCEEEEEcCCHHHHHHHHHHHHH-CCCCeEEEEeCChhHHHHHHHc-----CCCEEEeCCCCcccHHHHHHHH
Q 017868          175 RRANIGPETNVLIMGAGPIGLVTMLGAPRA-FGAPRIVIVDVDDYRLSVAKEI-----GADNIVKVSTNLQDIAEEVEKI  248 (365)
Q Consensus       175 ~~~~~~~g~~vlI~G~g~~G~~ai~~l~~~-~g~~~vi~v~~~~~~~~~~~~~-----g~~~~~~~~~~~~~~~~~i~~~  248 (365)
                      ....++++++||-.|+|. |..+.. +++. .....+++++.+++..+.+++.     |...+.....+..+.   +   
T Consensus       104 ~~~~~~~~~~VLD~G~G~-G~~~~~-la~~~~~~~~v~~vD~s~~~~~~a~~~~~~~~g~~~v~~~~~d~~~~---~---  175 (275)
T 1yb2_A          104 MRCGLRPGMDILEVGVGS-GNMSSY-ILYALNGKGTLTVVERDEDNLKKAMDNLSEFYDIGNVRTSRSDIADF---I---  175 (275)
T ss_dssp             --CCCCTTCEEEEECCTT-SHHHHH-HHHHHTTSSEEEEECSCHHHHHHHHHHHHTTSCCTTEEEECSCTTTC---C---
T ss_pred             HHcCCCCcCEEEEecCCC-CHHHHH-HHHHcCCCCEEEEEECCHHHHHHHHHHHHhcCCCCcEEEEECchhcc---C---
Confidence            556788999999998763 666666 5555 2334899999999887766543     533222211211110   0   


Q ss_pred             HHHhCCCceEEEeCCCCH-HHHHHHHHhcccCCEEEEEc
Q 017868          249 QKAMGTGIDVSFDCAGLN-KTMSTALGATCAGGKVCLVG  286 (365)
Q Consensus       249 ~~~~~~~~d~vid~~g~~-~~~~~~~~~l~~~G~~~~~g  286 (365)
                         ....+|+|+...... ..+..+.+.|+++|.++...
T Consensus       176 ---~~~~fD~Vi~~~~~~~~~l~~~~~~LkpgG~l~i~~  211 (275)
T 1yb2_A          176 ---SDQMYDAVIADIPDPWNHVQKIASMMKPGSVATFYL  211 (275)
T ss_dssp             ---CSCCEEEEEECCSCGGGSHHHHHHTEEEEEEEEEEE
T ss_pred             ---cCCCccEEEEcCcCHHHHHHHHHHHcCCCCEEEEEe
Confidence               135799999755433 46778889999999998874

>2x9g_A PTR1, pteridine reductase; short chain dehydrogenase, oxidoreductase; HET: NAP LYA; 1.10A {Trypanosoma brucei brucei} PDB: 2x9n_A* 2x9v_A* 3bmc_A* 3bmd_A* 3bme_A* 3bmf_A* 3bmg_A* 3bmh_A* 3bmi_A* 3bmj_A* 3bmk_A* 3bml_A* 3bmm_A* 3bmn_A* 3bmo_A* 3bmq_A* 3bmr_A* 3gn1_A* 3gn2_A* 3jq6_A* ...

Probab=95.14  E-value=0.071  Score=46.25  Aligned_cols=81  Identities=19%  Similarity=0.163  Sum_probs=47.6

Q ss_pred             CCCEEEEEcC-CHHHHHHHHHHHHHCCCCeEEEEeCCh-hHHH-HHH----HcCCCE-EEeCCCCc-----ccHHHHHHH
Q 017868          181 PETNVLIMGA-GPIGLVTMLGAPRAFGAPRIVIVDVDD-YRLS-VAK----EIGADN-IVKVSTNL-----QDIAEEVEK  247 (365)
Q Consensus       181 ~g~~vlI~G~-g~~G~~ai~~l~~~~g~~~vi~v~~~~-~~~~-~~~----~~g~~~-~~~~~~~~-----~~~~~~i~~  247 (365)
                      .+.++||+|+ +++|.++++.+++ .|+ .|+.+++++ ++.+ ..+    ..+... .+..+-.+     +++...+++
T Consensus        22 ~~k~~lVTGas~gIG~aia~~L~~-~G~-~V~~~~r~~~~~~~~~~~~l~~~~~~~~~~~~~Dv~~~~~~~~~v~~~~~~   99 (288)
T 2x9g_A           22 EAPAAVVTGAAKRIGRAIAVKLHQ-TGY-RVVIHYHNSAEAAVSLADELNKERSNTAVVCQADLTNSNVLPASCEEIINS   99 (288)
T ss_dssp             CCCEEEETTCSSHHHHHHHHHHHH-HTC-EEEEEESSCHHHHHHHHHHHHHHSTTCEEEEECCCSCSTTHHHHHHHHHHH
T ss_pred             CCCEEEEeCCCCHHHHHHHHHHHH-CCC-eEEEEeCCchHHHHHHHHHHHhhcCCceEEEEeecCCccCCHHHHHHHHHH
Confidence            4678999987 9999999995654 598 566666665 5443 222    334322 22222222     233333333


Q ss_pred             HHHHhCCCceEEEeCCC
Q 017868          248 IQKAMGTGIDVSFDCAG  264 (365)
Q Consensus       248 ~~~~~~~~~d~vid~~g  264 (365)
                      +.+. .+++|++|.++|
T Consensus       100 ~~~~-~g~iD~lvnnAG  115 (288)
T 2x9g_A          100 CFRA-FGRCDVLVNNAS  115 (288)
T ss_dssp             HHHH-HSCCCEEEECCC
T ss_pred             HHHh-cCCCCEEEECCC
Confidence            3322 248999999887

>4ina_A Saccharopine dehydrogenase; structural genomics, PSI-biology, northeast structural genom consortium, NESG, oxidoreductas; 2.49A {Wolinella succinogenes}

Probab=95.14  E-value=0.16  Score=46.55  Aligned_cols=97  Identities=19%  Similarity=0.162  Sum_probs=58.2

Q ss_pred             CEEEEEcCCHHHHHHHHHHHHHCCC--CeEEEEeCChhHHHH-HHHcCC-----CEEEeCCCCcccHHHHHHHHHHHhCC
Q 017868          183 TNVLIMGAGPIGLVTMLGAPRAFGA--PRIVIVDVDDYRLSV-AKEIGA-----DNIVKVSTNLQDIAEEVEKIQKAMGT  254 (365)
Q Consensus       183 ~~vlI~G~g~~G~~ai~~l~~~~g~--~~vi~v~~~~~~~~~-~~~~g~-----~~~~~~~~~~~~~~~~i~~~~~~~~~  254 (365)
                      .+|+|+|+|.+|..+++.++ ..|.  ..+++++++.++.+. +++++.     ...+..+-.  +. +.+.++.+  ..
T Consensus         2 ~kVlIiGaGgiG~~ia~~L~-~~g~~~~~V~v~~r~~~~~~~la~~l~~~~~~~~~~~~~D~~--d~-~~l~~~l~--~~   75 (405)
T 4ina_A            2 AKVLQIGAGGVGGVVAHKMA-MNREVFSHITLASRTLSKCQEIAQSIKAKGYGEIDITTVDAD--SI-EELVALIN--EV   75 (405)
T ss_dssp             CEEEEECCSHHHHHHHHHHH-TCTTTCCEEEEEESCHHHHHHHHHHHHHTTCCCCEEEECCTT--CH-HHHHHHHH--HH
T ss_pred             CEEEEECCCHHHHHHHHHHH-hCCCCceEEEEEECCHHHHHHHHHHhhhhcCCceEEEEecCC--CH-HHHHHHHH--hh
Confidence            37899999999999999454 4453  468888888887654 344431     222222221  11 22333322  12


Q ss_pred             CceEEEeCCCCHHHHHHHHHhcccCCEEEEE
Q 017868          255 GIDVSFDCAGLNKTMSTALGATCAGGKVCLV  285 (365)
Q Consensus       255 ~~d~vid~~g~~~~~~~~~~~l~~~G~~~~~  285 (365)
                      ++|+||++++........-.++..+-+++.+
T Consensus        76 ~~DvVin~ag~~~~~~v~~a~l~~g~~vvD~  106 (405)
T 4ina_A           76 KPQIVLNIALPYQDLTIMEACLRTGVPYLDT  106 (405)
T ss_dssp             CCSEEEECSCGGGHHHHHHHHHHHTCCEEES
T ss_pred             CCCEEEECCCcccChHHHHHHHHhCCCEEEe
Confidence            5899999998654444555566666666654

>3e03_A Short chain dehydrogenase; structural genomics, PSI-2, protein structure initiative, NEW YORK structural genomix research consortium; 1.69A {Xanthomonas campestris PV}

Probab=95.13  E-value=0.14  Score=44.08  Aligned_cols=81  Identities=22%  Similarity=0.295  Sum_probs=48.4

Q ss_pred             CCCEEEEEcC-CHHHHHHHHHHHHHCCCCeEEEEeCChhH-----------HHHHHHcCCCE-EEeCCC-CcccHHHHHH
Q 017868          181 PETNVLIMGA-GPIGLVTMLGAPRAFGAPRIVIVDVDDYR-----------LSVAKEIGADN-IVKVST-NLQDIAEEVE  246 (365)
Q Consensus       181 ~g~~vlI~G~-g~~G~~ai~~l~~~~g~~~vi~v~~~~~~-----------~~~~~~~g~~~-~~~~~~-~~~~~~~~i~  246 (365)
                      .++++||+|+ +++|.++++.++ ..|+ +|+.++++.++           .+.++..+... .+..+- +.++..+.++
T Consensus         5 ~~k~~lVTGas~GIG~aia~~la-~~G~-~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~Dv~~~~~v~~~~~   82 (274)
T 3e03_A            5 SGKTLFITGASRGIGLAIALRAA-RDGA-NVAIAAKSAVANPKLPGTIHSAAAAVNAAGGQGLALKCDIREEDQVRAAVA   82 (274)
T ss_dssp             TTCEEEEETTTSHHHHHHHHHHH-HTTC-EEEEEESCCSCCTTSCCCHHHHHHHHHHHTSEEEEEECCTTCHHHHHHHHH
T ss_pred             CCcEEEEECCCChHHHHHHHHHH-HCCC-EEEEEeccchhhhhhHHHHHHHHHHHHhcCCeEEEEeCCCCCHHHHHHHHH
Confidence            4688999987 999999999555 5599 57777666532           12223334322 222222 2233333444


Q ss_pred             HHHHHhCCCceEEEeCCC
Q 017868          247 KIQKAMGTGIDVSFDCAG  264 (365)
Q Consensus       247 ~~~~~~~~~~d~vid~~g  264 (365)
                      ++.+. .+++|++|.++|
T Consensus        83 ~~~~~-~g~iD~lvnnAG   99 (274)
T 3e03_A           83 ATVDT-FGGIDILVNNAS   99 (274)
T ss_dssp             HHHHH-HSCCCEEEECCC
T ss_pred             HHHHH-cCCCCEEEECCC
Confidence            44332 258999999988

>2ph3_A 3-oxoacyl-[acyl carrier protein] reductase; TTHA0415, structural genomics, southea collaboratory for structural genomics, secsg; 1.91A {Thermus thermophilus HB8}

Probab=95.12  E-value=0.1  Score=43.81  Aligned_cols=80  Identities=19%  Similarity=0.218  Sum_probs=46.7

Q ss_pred             CCEEEEEcC-CHHHHHHHHHHHHHCCCCeEEEE-eCChhHHHHH----HHcCCCE-E-EeCCCC-cccHHHHHHHHHHHh
Q 017868          182 ETNVLIMGA-GPIGLVTMLGAPRAFGAPRIVIV-DVDDYRLSVA----KEIGADN-I-VKVSTN-LQDIAEEVEKIQKAM  252 (365)
Q Consensus       182 g~~vlI~G~-g~~G~~ai~~l~~~~g~~~vi~v-~~~~~~~~~~----~~~g~~~-~-~~~~~~-~~~~~~~i~~~~~~~  252 (365)
                      ++++||+|+ |++|.++++.++ ..|++ |+++ ++++++.+.+    +..+... . +..+-. .+++.+.+.++.+..
T Consensus         1 ~k~vlITGasggiG~~~a~~l~-~~G~~-v~~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~D~~~~~~~~~~~~~~~~~~   78 (245)
T 2ph3_A            1 MRKALITGASRGIGRAIALRLA-EDGFA-LAIHYGQNREKAEEVAEEARRRGSPLVAVLGANLLEAEAATALVHQAAEVL   78 (245)
T ss_dssp             CCEEEETTTTSHHHHHHHHHHH-TTTCE-EEEEESSCHHHHHHHHHHHHHTTCSCEEEEECCTTSHHHHHHHHHHHHHHH
T ss_pred             CCEEEEeCCCchHHHHHHHHHH-HCCCE-EEEEcCCCHHHHHHHHHHHHhcCCceEEEEeccCCCHHHHHHHHHHHHHhc
Confidence            357899987 999999999554 56984 5555 6776654432    2234321 2 222222 223333333333222


Q ss_pred             CCCceEEEeCCC
Q 017868          253 GTGIDVSFDCAG  264 (365)
Q Consensus       253 ~~~~d~vid~~g  264 (365)
                       +++|++|.++|
T Consensus        79 -~~~d~li~~Ag   89 (245)
T 2ph3_A           79 -GGLDTLVNNAG   89 (245)
T ss_dssp             -TCCCEEEECCC
T ss_pred             -CCCCEEEECCC
Confidence             47999999887

>3d64_A Adenosylhomocysteinase; structural genomics, ssgcid, S-adenosyl-L-homocysteine hydro NAD, one-carbon metabolism; HET: NAD; 2.30A {Burkholderia pseudomallei} PDB: 3glq_A*

Probab=95.11  E-value=0.081  Score=49.45  Aligned_cols=93  Identities=17%  Similarity=0.200  Sum_probs=67.0

Q ss_pred             CCCCCEEEEEcCCHHHHHHHHHHHHHCCCCeEEEEeCChhHHHHHHHcCCCEEEeCCCCcccHHHHHHHHHHHhCCCceE
Q 017868          179 IGPETNVLIMGAGPIGLVTMLGAPRAFGAPRIVIVDVDDYRLSVAKEIGADNIVKVSTNLQDIAEEVEKIQKAMGTGIDV  258 (365)
Q Consensus       179 ~~~g~~vlI~G~g~~G~~ai~~l~~~~g~~~vi~v~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~i~~~~~~~~~~~d~  258 (365)
                      .-.|.+|+|.|.|.+|..+++ .++.+|+ +|++++++..+...+...|...        .+    +.+.    -...|+
T Consensus       274 ~L~GktVgIIG~G~IG~~vA~-~l~~~G~-~V~v~d~~~~~~~~a~~~G~~~--------~~----l~el----l~~aDi  335 (494)
T 3d64_A          274 MIAGKIAVVAGYGDVGKGCAQ-SLRGLGA-TVWVTEIDPICALQAAMEGYRV--------VT----MEYA----ADKADI  335 (494)
T ss_dssp             CCTTCEEEEECCSHHHHHHHH-HHHTTTC-EEEEECSCHHHHHHHHTTTCEE--------CC----HHHH----TTTCSE
T ss_pred             ccCCCEEEEEccCHHHHHHHH-HHHHCCC-EEEEEeCChHhHHHHHHcCCEe--------CC----HHHH----HhcCCE
Confidence            357899999999999999999 8889999 6888988887653444456531        12    2222    257899


Q ss_pred             EEeCCCCHHHH-HHHHHhcccCCEEEEEccCC
Q 017868          259 SFDCAGLNKTM-STALGATCAGGKVCLVGMGH  289 (365)
Q Consensus       259 vid~~g~~~~~-~~~~~~l~~~G~~~~~g~~~  289 (365)
                      |+-+++....+ ...+..++++..++.++...
T Consensus       336 Vi~~~~t~~lI~~~~l~~MK~gAilINvgrg~  367 (494)
T 3d64_A          336 FVTATGNYHVINHDHMKAMRHNAIVCNIGHFD  367 (494)
T ss_dssp             EEECSSSSCSBCHHHHHHCCTTEEEEECSSSS
T ss_pred             EEECCCcccccCHHHHhhCCCCcEEEEcCCCc
Confidence            99988654333 35678899998888887543

>1mjf_A Spermidine synthase; spermidine synthetase, structural genomics, PSI, protein structure initiative; 1.80A {Pyrococcus furiosus} SCOP: c.66.1.17 PDB: 2e5w_A* 2zsu_A*

Probab=95.10  E-value=0.13  Score=44.41  Aligned_cols=95  Identities=18%  Similarity=0.228  Sum_probs=62.2

Q ss_pred             CCCCEEEEEcCCHHHHHHHHHHHHHCCCCeEEEEeCChhHHHHHHHc-----CC---------CEEEeCCCCcccHHHHH
Q 017868          180 GPETNVLIMGAGPIGLVTMLGAPRAFGAPRIVIVDVDDYRLSVAKEI-----GA---------DNIVKVSTNLQDIAEEV  245 (365)
Q Consensus       180 ~~g~~vlI~G~g~~G~~ai~~l~~~~g~~~vi~v~~~~~~~~~~~~~-----g~---------~~~~~~~~~~~~~~~~i  245 (365)
                      .++.+||+.|+|. |..+.. +++. +...+++++.+++..+.+++.     +.         ..+....   .|..+.+
T Consensus        74 ~~~~~VLdiG~G~-G~~~~~-l~~~-~~~~v~~vDid~~~i~~ar~~~~~~~~l~~~~~~~~~~~v~~~~---~D~~~~l  147 (281)
T 1mjf_A           74 PKPKRVLVIGGGD-GGTVRE-VLQH-DVDEVIMVEIDEDVIMVSKDLIKIDNGLLEAMLNGKHEKAKLTI---GDGFEFI  147 (281)
T ss_dssp             SCCCEEEEEECTT-SHHHHH-HTTS-CCSEEEEEESCHHHHHHHHHHTCTTTTHHHHHHTTCCSSEEEEE---SCHHHHH
T ss_pred             CCCCeEEEEcCCc-CHHHHH-HHhC-CCCEEEEEECCHHHHHHHHHHHhhccccccccccCCCCcEEEEE---CchHHHh
Confidence            4568999998754 566666 6666 777899999999988887653     21         1111111   2322222


Q ss_pred             HHHHHHhCCCceEEEeCCC----------CHHHHHHHHHhcccCCEEEEE
Q 017868          246 EKIQKAMGTGIDVSFDCAG----------LNKTMSTALGATCAGGKVCLV  285 (365)
Q Consensus       246 ~~~~~~~~~~~d~vid~~g----------~~~~~~~~~~~l~~~G~~~~~  285 (365)
                      ..     ...+|+|+-...          ....+..+.++|+++|.++..
T Consensus       148 ~~-----~~~fD~Ii~d~~~~~~~~~~l~~~~~l~~~~~~L~pgG~lv~~  192 (281)
T 1mjf_A          148 KN-----NRGFDVIIADSTDPVGPAKVLFSEEFYRYVYDALNNPGIYVTQ  192 (281)
T ss_dssp             HH-----CCCEEEEEEECCCCC-----TTSHHHHHHHHHHEEEEEEEEEE
T ss_pred             cc-----cCCeeEEEECCCCCCCcchhhhHHHHHHHHHHhcCCCcEEEEE
Confidence            21     468999975332          244677888999999999876

>1qsg_A Enoyl-[acyl-carrier-protein] reductase; enoyl reductase, oxidoreductase; HET: GLC NAD TCL; 1.75A {Escherichia coli} SCOP: c.2.1.2 PDB: 1c14_A* 1i2z_A* 1i30_A* 1lx6_A* 1lxc_A* 1mfp_A* 2fhs_A 1qg6_A* 1dfg_A* 1dfh_A* 1d8a_A* 1dfi_A* 3pje_A* 3pjd_A* 3pjf_A*

Probab=95.10  E-value=0.15  Score=43.58  Aligned_cols=81  Identities=16%  Similarity=0.197  Sum_probs=46.9

Q ss_pred             CCCEEEEEcC---CHHHHHHHHHHHHHCCCCeEEEEeCCh---hHHHHH-HHcCCCEEEeCCCCc-ccHHHHHHHHHHHh
Q 017868          181 PETNVLIMGA---GPIGLVTMLGAPRAFGAPRIVIVDVDD---YRLSVA-KEIGADNIVKVSTNL-QDIAEEVEKIQKAM  252 (365)
Q Consensus       181 ~g~~vlI~G~---g~~G~~ai~~l~~~~g~~~vi~v~~~~---~~~~~~-~~~g~~~~~~~~~~~-~~~~~~i~~~~~~~  252 (365)
                      .+.++||+|+   |++|.++++.++ ..|+ .|+.+++++   +..+.+ +..+....+..+-.+ +++...+++..+ .
T Consensus         8 ~~k~vlVTGas~~~gIG~~ia~~l~-~~G~-~V~~~~r~~~~~~~~~~l~~~~~~~~~~~~D~~~~~~v~~~~~~~~~-~   84 (265)
T 1qsg_A            8 SGKRILVTGVASKLSIAYGIAQAMH-REGA-ELAFTYQNDKLKGRVEEFAAQLGSDIVLQCDVAEDASIDTMFAELGK-V   84 (265)
T ss_dssp             TTCEEEECCCCSTTSHHHHHHHHHH-HTTC-EEEEEESSTTTHHHHHHHHHHTTCCCEEECCTTCHHHHHHHHHHHHT-T
T ss_pred             CCCEEEEECCCCCCCHHHHHHHHHH-HCCC-EEEEEcCcHHHHHHHHHHHHhcCCcEEEEccCCCHHHHHHHHHHHHH-H
Confidence            4678999975   589999999555 5598 566676665   222222 333433333333222 233333333322 1


Q ss_pred             CCCceEEEeCCC
Q 017868          253 GTGIDVSFDCAG  264 (365)
Q Consensus       253 ~~~~d~vid~~g  264 (365)
                      -+++|++|.++|
T Consensus        85 ~g~iD~lv~~Ag   96 (265)
T 1qsg_A           85 WPKFDGFVHSIG   96 (265)
T ss_dssp             CSSEEEEEECCC
T ss_pred             cCCCCEEEECCC
Confidence            347999999887

>3oec_A Carveol dehydrogenase (mytha.01326.C, A0R518 HOMO; ssgcid, structural genomics; 1.95A {Mycobacterium thermoresistibile}

Probab=95.09  E-value=0.15  Score=44.96  Aligned_cols=82  Identities=22%  Similarity=0.253  Sum_probs=48.6

Q ss_pred             CCCCEEEEEcC-CHHHHHHHHHHHHHCCCCeEEEEeCC------------hhHHH----HHHHcCCCEE-EeCCC-Cccc
Q 017868          180 GPETNVLIMGA-GPIGLVTMLGAPRAFGAPRIVIVDVD------------DYRLS----VAKEIGADNI-VKVST-NLQD  240 (365)
Q Consensus       180 ~~g~~vlI~G~-g~~G~~ai~~l~~~~g~~~vi~v~~~------------~~~~~----~~~~~g~~~~-~~~~~-~~~~  240 (365)
                      -.|.++||+|+ +++|.++++.++ ..|+ .|++++++            .++.+    .+++.+.... +..+- +.++
T Consensus        44 l~gk~~lVTGas~GIG~aia~~la-~~G~-~Vv~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~Dv~d~~~  121 (317)
T 3oec_A           44 LQGKVAFITGAARGQGRTHAVRLA-QDGA-DIVAIDLCRQQPNLDYAQGSPEELKETVRLVEEQGRRIIARQADVRDLAS  121 (317)
T ss_dssp             TTTCEEEESSCSSHHHHHHHHHHH-HTTC-EEEEEECCCCCTTCCSCCCCHHHHHHHHHHHHHTTCCEEEEECCTTCHHH
T ss_pred             cCCCEEEEeCCCcHHHHHHHHHHH-HCCC-eEEEEecccccccccccccCHHHHHHHHHHHHhcCCeEEEEECCCCCHHH
Confidence            35789999987 999999999555 5599 56666554            33322    2334454322 22222 2233


Q ss_pred             HHHHHHHHHHHhCCCceEEEeCCC
Q 017868          241 IAEEVEKIQKAMGTGIDVSFDCAG  264 (365)
Q Consensus       241 ~~~~i~~~~~~~~~~~d~vid~~g  264 (365)
                      ..+.++++.+.. +++|++|.++|
T Consensus       122 v~~~~~~~~~~~-g~iD~lVnnAg  144 (317)
T 3oec_A          122 LQAVVDEALAEF-GHIDILVSNVG  144 (317)
T ss_dssp             HHHHHHHHHHHH-SCCCEEEECCC
T ss_pred             HHHHHHHHHHHc-CCCCEEEECCC
Confidence            444444443332 58999999887

>3guy_A Short-chain dehydrogenase/reductase SDR; structural genomics, oxidoreductase, PSI-2, protein structur initiative; 1.90A {Vibrio parahaemolyticus}

Probab=95.09  E-value=0.074  Score=44.37  Aligned_cols=76  Identities=17%  Similarity=0.181  Sum_probs=47.5

Q ss_pred             EEEEEcC-CHHHHHHHHHHHHHCCCCeEEEEeCChhHHHHH-HHcCCC-EEEeCCCCcccHHHHHHHHHHHhCCCceEEE
Q 017868          184 NVLIMGA-GPIGLVTMLGAPRAFGAPRIVIVDVDDYRLSVA-KEIGAD-NIVKVSTNLQDIAEEVEKIQKAMGTGIDVSF  260 (365)
Q Consensus       184 ~vlI~G~-g~~G~~ai~~l~~~~g~~~vi~v~~~~~~~~~~-~~~g~~-~~~~~~~~~~~~~~~i~~~~~~~~~~~d~vi  260 (365)
                      ++||+|+ +++|.+++..++ ..|++ |+.+++++++.+.+ ++++.. ..+..+-  .+ .+.++++.+.....+|+++
T Consensus         3 ~vlVTGas~gIG~~~a~~l~-~~G~~-V~~~~r~~~~~~~~~~~~~~~~~~~~~D~--~~-~~~v~~~~~~~~~~~d~lv   77 (230)
T 3guy_A            3 LIVITGASSGLGAELAKLYD-AEGKA-TYLTGRSESKLSTVTNCLSNNVGYRARDL--AS-HQEVEQLFEQLDSIPSTVV   77 (230)
T ss_dssp             CEEEESTTSHHHHHHHHHHH-HTTCC-EEEEESCHHHHHHHHHTCSSCCCEEECCT--TC-HHHHHHHHHSCSSCCSEEE
T ss_pred             EEEEecCCchHHHHHHHHHH-HCCCE-EEEEeCCHHHHHHHHHHHhhccCeEeecC--CC-HHHHHHHHHHHhhcCCEEE
Confidence            6899987 999999999554 56995 77778888776654 445322 1222222  12 2334444433334559999


Q ss_pred             eCCC
Q 017868          261 DCAG  264 (365)
Q Consensus       261 d~~g  264 (365)
                      .++|
T Consensus        78 ~~Ag   81 (230)
T 3guy_A           78 HSAG   81 (230)
T ss_dssp             ECCC
T ss_pred             EeCC
Confidence            9887

>3rku_A Oxidoreductase YMR226C; substrate fingerprint, short chain oxidoreductase, rossmann oxidoreductase; HET: NAP; 2.60A {Saccharomyces cerevisiae}

Probab=95.07  E-value=0.083  Score=45.89  Aligned_cols=82  Identities=24%  Similarity=0.317  Sum_probs=49.0

Q ss_pred             CCCEEEEEcC-CHHHHHHHHHHHHHCCC--CeEEEEeCChhHHHHH-HHc-----CCCE-EEeCCC-CcccHHHHHHHHH
Q 017868          181 PETNVLIMGA-GPIGLVTMLGAPRAFGA--PRIVIVDVDDYRLSVA-KEI-----GADN-IVKVST-NLQDIAEEVEKIQ  249 (365)
Q Consensus       181 ~g~~vlI~G~-g~~G~~ai~~l~~~~g~--~~vi~v~~~~~~~~~~-~~~-----g~~~-~~~~~~-~~~~~~~~i~~~~  249 (365)
                      .+.++||+|+ +++|.+++..+++. |+  .+|+.++++.++.+.+ +++     +... .+..+- +.+++.+.++++.
T Consensus        32 ~~k~~lVTGas~GIG~aia~~l~~~-G~~~~~V~~~~r~~~~~~~~~~~l~~~~~~~~~~~~~~Dv~d~~~v~~~~~~~~  110 (287)
T 3rku_A           32 AKKTVLITGASAGIGKATALEYLEA-SNGDMKLILAARRLEKLEELKKTIDQEFPNAKVHVAQLDITQAEKIKPFIENLP  110 (287)
T ss_dssp             TTCEEEEESTTSHHHHHHHHHHHHH-HTTCSEEEEEESCHHHHHHHHHHHHHHCTTCEEEEEECCTTCGGGHHHHHHTSC
T ss_pred             CCCEEEEecCCChHHHHHHHHHHHc-CCCCceEEEEECCHHHHHHHHHHHHhhCCCCeEEEEECCCCCHHHHHHHHHHHH
Confidence            4679999987 99999998856544 55  2677778887765433 222     3221 222222 2233433333332


Q ss_pred             HHhCCCceEEEeCCC
Q 017868          250 KAMGTGIDVSFDCAG  264 (365)
Q Consensus       250 ~~~~~~~d~vid~~g  264 (365)
                      +. -+++|++|.++|
T Consensus       111 ~~-~g~iD~lVnnAG  124 (287)
T 3rku_A          111 QE-FKDIDILVNNAG  124 (287)
T ss_dssp             GG-GCSCCEEEECCC
T ss_pred             Hh-cCCCCEEEECCC
Confidence            21 247999999887

>1ja9_A 4HNR, 1,3,6,8-tetrahydroxynaphthalene reductase; protein-NADPH-active site inhibitor complex, oxidoreductase, chain dehydrogenase; HET: NDP PYQ; 1.50A {Magnaporthe grisea} SCOP: c.2.1.2

Probab=95.07  E-value=0.15  Score=43.65  Aligned_cols=81  Identities=19%  Similarity=0.241  Sum_probs=47.8

Q ss_pred             CCCEEEEEcC-CHHHHHHHHHHHHHCCCCeEEEEeC-ChhHHHH----HHHcCCCE-EEeCCCC-cccHHHHHHHHHHHh
Q 017868          181 PETNVLIMGA-GPIGLVTMLGAPRAFGAPRIVIVDV-DDYRLSV----AKEIGADN-IVKVSTN-LQDIAEEVEKIQKAM  252 (365)
Q Consensus       181 ~g~~vlI~G~-g~~G~~ai~~l~~~~g~~~vi~v~~-~~~~~~~----~~~~g~~~-~~~~~~~-~~~~~~~i~~~~~~~  252 (365)
                      ++.++||+|+ |++|.++++.++ ..|+ .|+++++ ++++.+.    +++.+... .+..+-. ..++.+.++++.+..
T Consensus        20 ~~k~vlItGasggiG~~la~~l~-~~G~-~v~~~~r~~~~~~~~~~~~l~~~~~~~~~~~~D~~~~~~~~~~~~~~~~~~   97 (274)
T 1ja9_A           20 AGKVALTTGAGRGIGRGIAIELG-RRGA-SVVVNYGSSSKAAEEVVAELKKLGAQGVAIQADISKPSEVVALFDKAVSHF   97 (274)
T ss_dssp             TTCEEEETTTTSHHHHHHHHHHH-HTTC-EEEEEESSCHHHHHHHHHHHHHTTCCEEEEECCTTSHHHHHHHHHHHHHHH
T ss_pred             CCCEEEEeCCCchHHHHHHHHHH-HCCC-EEEEEcCCchHHHHHHHHHHHhcCCcEEEEEecCCCHHHHHHHHHHHHHHc
Confidence            4678999987 999999999554 5598 4666666 5554432    23335432 2222222 223333343333322


Q ss_pred             CCCceEEEeCCC
Q 017868          253 GTGIDVSFDCAG  264 (365)
Q Consensus       253 ~~~~d~vid~~g  264 (365)
                       +++|++|.++|
T Consensus        98 -~~~d~vi~~Ag  108 (274)
T 1ja9_A           98 -GGLDFVMSNSG  108 (274)
T ss_dssp             -SCEEEEECCCC
T ss_pred             -CCCCEEEECCC
Confidence             47999999887

>4gqa_A NAD binding oxidoreductase; structural genomics, PSI-biology, NEW YORK structural genomi research consortium, nysgrc; HET: MSE; 2.42A {Klebsiella pneumoniae}

Probab=95.06  E-value=0.15  Score=46.78  Aligned_cols=130  Identities=21%  Similarity=0.180  Sum_probs=81.6

Q ss_pred             CEEEEEcCCHHHHHHHHHHHHH--------CCCCeEEEEeCChhHHH-HHHHcCCCEEEeCCCCcccHHHHHHHHHHHhC
Q 017868          183 TNVLIMGAGPIGLVTMLGAPRA--------FGAPRIVIVDVDDYRLS-VAKEIGADNIVKVSTNLQDIAEEVEKIQKAMG  253 (365)
Q Consensus       183 ~~vlI~G~g~~G~~ai~~l~~~--------~g~~~vi~v~~~~~~~~-~~~~~g~~~~~~~~~~~~~~~~~i~~~~~~~~  253 (365)
                      =+|.|+|+|.+|...+..+.+.        .+++.+.+++.++++.+ +++++|...++      .++.+.+.      .
T Consensus        27 lrvgiIG~G~ig~~h~~~~~~~~~~~~~~~~~~elvav~d~~~~~a~~~a~~~~~~~~y------~d~~~ll~------~   94 (412)
T 4gqa_A           27 LNIGLIGSGFMGQAHADAYRRAAMFYPDLPKRPHLYALADQDQAMAERHAAKLGAEKAY------GDWRELVN------D   94 (412)
T ss_dssp             EEEEEECCSHHHHHHHHHHHHHHHHCTTSSSEEEEEEEECSSHHHHHHHHHHHTCSEEE------SSHHHHHH------C
T ss_pred             ceEEEEcCcHHHHHHHHHHHhccccccccCCCeEEEEEEcCCHHHHHHHHHHcCCCeEE------CCHHHHhc------C
Confidence            4688999999998766633332        14555556677777765 56889987654      24444432      4


Q ss_pred             CCceEEEeCCCCHHHHHHHHHhcccCCEEEEEccCCCCccccchH-------hhhcCcEEE-e-ecccCCcHHHHHHHHH
Q 017868          254 TGIDVSFDCAGLNKTMSTALGATCAGGKVCLVGMGHHEMTVPLTP-------AAVREVDVV-G-VFRYKNTWPLCLELLR  324 (365)
Q Consensus       254 ~~~d~vid~~g~~~~~~~~~~~l~~~G~~~~~g~~~~~~~~~~~~-------~~~~~~~i~-~-~~~~~~~~~~~~~~l~  324 (365)
                      ..+|+|+-|+....+.+.+..+|..| +-+++.   .+.......       .-.+++.+. + ...+...+..+.++++
T Consensus        95 ~~vD~V~I~tp~~~H~~~~~~al~aG-khVl~E---KP~a~~~~ea~~l~~~a~~~g~~~~v~~~~R~~p~~~~~k~~i~  170 (412)
T 4gqa_A           95 PQVDVVDITSPNHLHYTMAMAAIAAG-KHVYCE---KPLAVNEQQAQEMAQAARRAGVKTMVAFNNIKTPAALLAKQIIA  170 (412)
T ss_dssp             TTCCEEEECSCGGGHHHHHHHHHHTT-CEEEEE---SCSCSSHHHHHHHHHHHHHHTCCEEEECGGGTSHHHHHHHHHHH
T ss_pred             CCCCEEEECCCcHHHHHHHHHHHHcC-CCeEee---cCCcCCHHHHHHHHHHHHHhCCeeeeccceecCHHHHHHHHHHh
Confidence            67999999998887888888888855 445553   111111111       112232222 2 2234667888899999


Q ss_pred             cCCC
Q 017868          325 SGKI  328 (365)
Q Consensus       325 ~g~~  328 (365)
                      +|.+
T Consensus       171 ~G~i  174 (412)
T 4gqa_A          171 RGDI  174 (412)
T ss_dssp             HTTT
T ss_pred             cCCc
Confidence            9887

>3vc1_A Geranyl diphosphate 2-C-methyltransferase; rossmann fold, methyltransferase fold, SAM-dependent methyltransferase; HET: SAH GST GOL; 1.82A {Streptomyces coelicolor} PDB: 3vc2_A* 4f84_A* 4f85_A 4f86_A*

Probab=95.05  E-value=0.18  Score=44.18  Aligned_cols=99  Identities=19%  Similarity=0.290  Sum_probs=65.8

Q ss_pred             HhcC-CCCCCEEEEEcCCHHHHHHHHHHHHHCCCCeEEEEeCChhHHHHHHH----cCCC---EEEeCCCCcccHHHHHH
Q 017868          175 RRAN-IGPETNVLIMGAGPIGLVTMLGAPRAFGAPRIVIVDVDDYRLSVAKE----IGAD---NIVKVSTNLQDIAEEVE  246 (365)
Q Consensus       175 ~~~~-~~~g~~vlI~G~g~~G~~ai~~l~~~~g~~~vi~v~~~~~~~~~~~~----~g~~---~~~~~~~~~~~~~~~i~  246 (365)
                      +... ++++++||-.|+|. |..+.. +++..+. .+++++.+++..+.+++    .|..   ..+.  .+..++.    
T Consensus       110 ~~l~~~~~~~~vLDiGcG~-G~~~~~-la~~~~~-~v~gvD~s~~~~~~a~~~~~~~~~~~~v~~~~--~d~~~~~----  180 (312)
T 3vc1_A          110 DHLGQAGPDDTLVDAGCGR-GGSMVM-AHRRFGS-RVEGVTLSAAQADFGNRRARELRIDDHVRSRV--CNMLDTP----  180 (312)
T ss_dssp             TTSCCCCTTCEEEEESCTT-SHHHHH-HHHHHCC-EEEEEESCHHHHHHHHHHHHHTTCTTTEEEEE--CCTTSCC----
T ss_pred             HHhccCCCCCEEEEecCCC-CHHHHH-HHHHcCC-EEEEEeCCHHHHHHHHHHHHHcCCCCceEEEE--CChhcCC----
Confidence            3344 78999999998864 666777 6666576 79999999987766554    4432   1222  1111110    


Q ss_pred             HHHHHhCCCceEEEeC-----CCCHHHHHHHHHhcccCCEEEEEc
Q 017868          247 KIQKAMGTGIDVSFDC-----AGLNKTMSTALGATCAGGKVCLVG  286 (365)
Q Consensus       247 ~~~~~~~~~~d~vid~-----~g~~~~~~~~~~~l~~~G~~~~~g  286 (365)
                          ...+.+|+|+..     .+....+..+.++|+++|.+++..
T Consensus       181 ----~~~~~fD~V~~~~~l~~~~~~~~l~~~~~~LkpgG~l~~~~  221 (312)
T 3vc1_A          181 ----FDKGAVTASWNNESTMYVDLHDLFSEHSRFLKVGGRYVTIT  221 (312)
T ss_dssp             ----CCTTCEEEEEEESCGGGSCHHHHHHHHHHHEEEEEEEEEEE
T ss_pred             ----CCCCCEeEEEECCchhhCCHHHHHHHHHHHcCCCcEEEEEE
Confidence                013689999863     233567788999999999998875

>3ezl_A Acetoacetyl-COA reductase; ssgcid, acetyacetyl-COA reductase, oxidoreductase, structural genomics; HET: P4C; 2.25A {Burkholderia pseudomallei 1710B} SCOP: c.2.1.0

Probab=95.05  E-value=0.094  Score=44.48  Aligned_cols=83  Identities=20%  Similarity=0.224  Sum_probs=46.7

Q ss_pred             CCCCCEEEEEcC-CHHHHHHHHHHHHHCCCCeEEEEe-CChhH----HHHHHHcCCC-EEEeCCC-CcccHHHHHHHHHH
Q 017868          179 IGPETNVLIMGA-GPIGLVTMLGAPRAFGAPRIVIVD-VDDYR----LSVAKEIGAD-NIVKVST-NLQDIAEEVEKIQK  250 (365)
Q Consensus       179 ~~~g~~vlI~G~-g~~G~~ai~~l~~~~g~~~vi~v~-~~~~~----~~~~~~~g~~-~~~~~~~-~~~~~~~~i~~~~~  250 (365)
                      ..+++++||+|+ +++|.+++..++ ..|++ |+.++ ++.++    .+.+++.+.. ..+..+- +.++..+.++++.+
T Consensus        10 ~~~~k~vlITGas~giG~~ia~~l~-~~G~~-v~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~Dv~~~~~v~~~~~~~~~   87 (256)
T 3ezl_A           10 VMSQRIAYVTGGMGGIGTSICQRLH-KDGFR-VVAGCGPNSPRRVKWLEDQKALGFDFYASEGNVGDWDSTKQAFDKVKA   87 (256)
T ss_dssp             ---CEEEEETTTTSHHHHHHHHHHH-HTTEE-EEEEECTTCSSHHHHHHHHHHTTCCCEEEECCTTCHHHHHHHHHHHHH
T ss_pred             CCCCCEEEEECCCChHHHHHHHHHH-HCCCE-EEEEeCCCHHHHHHHHHHHHhcCCeeEEEecCCCCHHHHHHHHHHHHH
Confidence            356788999987 999999999555 55995 55444 33332    2233344432 2222222 22334444444433


Q ss_pred             HhCCCceEEEeCCC
Q 017868          251 AMGTGIDVSFDCAG  264 (365)
Q Consensus       251 ~~~~~~d~vid~~g  264 (365)
                      . -+++|++|.++|
T Consensus        88 ~-~g~id~lv~~Ag  100 (256)
T 3ezl_A           88 E-VGEIDVLVNNAG  100 (256)
T ss_dssp             H-TCCEEEEEECCC
T ss_pred             h-cCCCCEEEECCC
Confidence            3 358999999887

>3e9n_A Putative short-chain dehydrogenase/reductase; structural genomics, unknown function, oxidoreductase, PSI- 2; 2.40A {Corynebacterium glutamicum}

Probab=95.05  E-value=0.012  Score=49.81  Aligned_cols=76  Identities=20%  Similarity=0.238  Sum_probs=45.3

Q ss_pred             CCCEEEEEcC-CHHHHHHHHHHHHHCCCCeEEEEeCChhHHHHHHHcCCCEEEeCCCCcccHHHHHH-----HHHHHhCC
Q 017868          181 PETNVLIMGA-GPIGLVTMLGAPRAFGAPRIVIVDVDDYRLSVAKEIGADNIVKVSTNLQDIAEEVE-----KIQKAMGT  254 (365)
Q Consensus       181 ~g~~vlI~G~-g~~G~~ai~~l~~~~g~~~vi~v~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~i~-----~~~~~~~~  254 (365)
                      .+.++||+|+ +++|.++++.+++  |. .|+.+++++++.+.+.+..-...+..     |+.+...     +..+ .-+
T Consensus         4 ~~k~vlITGas~gIG~~~a~~l~~--g~-~v~~~~r~~~~~~~~~~~~~~~~~~~-----D~~~~~~~~~~~~~~~-~~~   74 (245)
T 3e9n_A            4 KKKIAVVTGATGGMGIEIVKDLSR--DH-IVYALGRNPEHLAALAEIEGVEPIES-----DIVKEVLEEGGVDKLK-NLD   74 (245)
T ss_dssp             --CEEEEESTTSHHHHHHHHHHTT--TS-EEEEEESCHHHHHHHHTSTTEEEEEC-----CHHHHHHTSSSCGGGT-TCS
T ss_pred             CCCEEEEEcCCCHHHHHHHHHHhC--CC-eEEEEeCCHHHHHHHHhhcCCcceec-----ccchHHHHHHHHHHHH-hcC
Confidence            3678999987 9999999995654  77 67888888887776655432222221     2211110     0000 124


Q ss_pred             CceEEEeCCCC
Q 017868          255 GIDVSFDCAGL  265 (365)
Q Consensus       255 ~~d~vid~~g~  265 (365)
                      ++|++|.++|.
T Consensus        75 ~id~lv~~Ag~   85 (245)
T 3e9n_A           75 HVDTLVHAAAV   85 (245)
T ss_dssp             CCSEEEECC--
T ss_pred             CCCEEEECCCc
Confidence            79999998884

>1zh8_A Oxidoreductase; TM0312, structural genomics, JO center for structural genomics, JCSG, protein structure INI PSI; HET: MSE NAP; 2.50A {Thermotoga maritima} SCOP: c.2.1.3 d.81.1.5

Probab=95.04  E-value=0.18  Score=44.98  Aligned_cols=130  Identities=15%  Similarity=0.118  Sum_probs=79.6

Q ss_pred             CEEEEEcCC-HHHHHHHHHHHHH-CCCCeEEEEeCChhHHH-HHHHcCCCEEEeCCCCcccHHHHHHHHHHHhCCCceEE
Q 017868          183 TNVLIMGAG-PIGLVTMLGAPRA-FGAPRIVIVDVDDYRLS-VAKEIGADNIVKVSTNLQDIAEEVEKIQKAMGTGIDVS  259 (365)
Q Consensus       183 ~~vlI~G~g-~~G~~ai~~l~~~-~g~~~vi~v~~~~~~~~-~~~~~g~~~~~~~~~~~~~~~~~i~~~~~~~~~~~d~v  259 (365)
                      -+|.|.|+| .+|...+..+.+. -+++.+.++++++++.+ +++++|.....      .++.+.+.      ...+|+|
T Consensus        19 irvgiIG~G~~~g~~~~~~l~~~~~~~~lvav~d~~~~~~~~~a~~~~~~~~~------~~~~~ll~------~~~vD~V   86 (340)
T 1zh8_A           19 IRLGIVGCGIAARELHLPALKNLSHLFEITAVTSRTRSHAEEFAKMVGNPAVF------DSYEELLE------SGLVDAV   86 (340)
T ss_dssp             EEEEEECCSHHHHHTHHHHHHTTTTTEEEEEEECSSHHHHHHHHHHHSSCEEE------SCHHHHHH------SSCCSEE
T ss_pred             eeEEEEecCHHHHHHHHHHHHhCCCceEEEEEEcCCHHHHHHHHHHhCCCccc------CCHHHHhc------CCCCCEE
Confidence            467888999 7898777734433 35655566677777765 56778864433      24433332      3579999


Q ss_pred             EeCCCCHHHHHHHHHhcccCCEEEEEccCCCCccccchH-------hhhcCcEEE-e-ecccCCcHHHHHHHHHcCCC
Q 017868          260 FDCAGLNKTMSTALGATCAGGKVCLVGMGHHEMTVPLTP-------AAVREVDVV-G-VFRYKNTWPLCLELLRSGKI  328 (365)
Q Consensus       260 id~~g~~~~~~~~~~~l~~~G~~~~~g~~~~~~~~~~~~-------~~~~~~~i~-~-~~~~~~~~~~~~~~l~~g~~  328 (365)
                      +.|+....+.+.+..+|..+ +-+++.   .+.......       .-.++..+. + ...+...++.+.+++++|.+
T Consensus        87 ~i~tp~~~H~~~~~~al~aG-khVl~E---KPla~~~~ea~~l~~~a~~~g~~~~v~~~~R~~p~~~~~k~~i~~g~i  160 (340)
T 1zh8_A           87 DLTLPVELNLPFIEKALRKG-VHVICE---KPISTDVETGKKVVELSEKSEKTVYIAENFRHVPAFWKAKELVESGAI  160 (340)
T ss_dssp             EECCCGGGHHHHHHHHHHTT-CEEEEE---SSSSSSHHHHHHHHHHHHHCSSCEEEECGGGGCHHHHHHHHHHHTTTT
T ss_pred             EEeCCchHHHHHHHHHHHCC-CcEEEe---CCCCCCHHHHHHHHHHHHHcCCeEEEEecccCCHHHHHHHHHHhcCCC
Confidence            99998877878888888755 445553   111111111       112233222 2 22336678888899999887

>1gz6_A Estradiol 17 beta-dehydrogenase 4; 17BETA-HSD4, MFE-2, beta-oxidation, peroxisome, SDR, steroid biosynthesis, oxidoreductase, NADP; HET: NAI; 2.38A {Rattus norvegicus} SCOP: c.2.1.2 PDB: 1zbq_A*

Probab=95.03  E-value=0.2  Score=44.17  Aligned_cols=80  Identities=23%  Similarity=0.275  Sum_probs=48.9

Q ss_pred             CCCEEEEEcC-CHHHHHHHHHHHHHCCCCeEEEEeC---------ChhHHH----HHHHcCCCEEEeCCCCcccHHHHHH
Q 017868          181 PETNVLIMGA-GPIGLVTMLGAPRAFGAPRIVIVDV---------DDYRLS----VAKEIGADNIVKVSTNLQDIAEEVE  246 (365)
Q Consensus       181 ~g~~vlI~G~-g~~G~~ai~~l~~~~g~~~vi~v~~---------~~~~~~----~~~~~g~~~~~~~~~~~~~~~~~i~  246 (365)
                      .|.++||+|+ +++|.++++.++ ..|+ .|++++.         +.++.+    .++..+.....++. +..+....+.
T Consensus         8 ~gk~~lVTGas~GIG~~~a~~La-~~Ga-~Vv~~~~~~~~~~~~R~~~~~~~~~~~l~~~~~~~~~D~~-~~~~~~~~~~   84 (319)
T 1gz6_A            8 DGRVVLVTGAGGGLGRAYALAFA-ERGA-LVVVNDLGGDFKGVGKGSSAADKVVEEIRRRGGKAVANYD-SVEAGEKLVK   84 (319)
T ss_dssp             TTCEEEETTTTSHHHHHHHHHHH-HTTC-EEEEECCCBCTTSCBCCSHHHHHHHHHHHHTTCEEEEECC-CGGGHHHHHH
T ss_pred             CCCEEEEeCCCcHHHHHHHHHHH-HCCC-EEEEEcCCcccccccCCHHHHHHHHHHHHhhCCeEEEeCC-CHHHHHHHHH
Confidence            4678999987 999999999555 5699 4666432         333332    22333444344443 2344444455


Q ss_pred             HHHHHhCCCceEEEeCCC
Q 017868          247 KIQKAMGTGIDVSFDCAG  264 (365)
Q Consensus       247 ~~~~~~~~~~d~vid~~g  264 (365)
                      ++.+. .+++|++|.++|
T Consensus        85 ~~~~~-~g~iD~lVnnAG  101 (319)
T 1gz6_A           85 TALDT-FGRIDVVVNNAG  101 (319)
T ss_dssp             HHHHH-TSCCCEEEECCC
T ss_pred             HHHHH-cCCCCEEEECCC
Confidence            44433 358999999887

>2i7c_A Spermidine synthase; transferase, structural genomics consor; HET: AAT 1PG; 1.71A {Plasmodium falciparum} PDB: 2hte_A* 3b7p_A* 3rie_A* 2pwp_A*

Probab=95.02  E-value=0.37  Score=41.66  Aligned_cols=99  Identities=17%  Similarity=0.150  Sum_probs=63.9

Q ss_pred             CCCCCEEEEEcCCHHHHHHHHHHHHHCCCCeEEEEeCChhHHHHHHHc-CC-------CEEEeCCCCcccHHHHHHHHHH
Q 017868          179 IGPETNVLIMGAGPIGLVTMLGAPRAFGAPRIVIVDVDDYRLSVAKEI-GA-------DNIVKVSTNLQDIAEEVEKIQK  250 (365)
Q Consensus       179 ~~~g~~vlI~G~g~~G~~ai~~l~~~~g~~~vi~v~~~~~~~~~~~~~-g~-------~~~~~~~~~~~~~~~~i~~~~~  250 (365)
                      ..++.+||+.|+|. |..+.. +++..+...+++++.+++..+.+++. ..       ..+....   .|..+.+..   
T Consensus        76 ~~~~~~VLdiG~G~-G~~~~~-l~~~~~~~~v~~vDid~~~i~~a~~~~~~~~~~~~~~~v~~~~---~D~~~~l~~---  147 (283)
T 2i7c_A           76 SKEPKNVLVVGGGD-GGIIRE-LCKYKSVENIDICEIDETVIEVSKIYFKNISCGYEDKRVNVFI---EDASKFLEN---  147 (283)
T ss_dssp             SSSCCEEEEEECTT-SHHHHH-HTTCTTCCEEEEEESCHHHHHHHHHHCTTTSGGGGSTTEEEEE---SCHHHHHHH---
T ss_pred             CCCCCeEEEEeCCc-CHHHHH-HHHcCCCCEEEEEECCHHHHHHHHHHhHHhccccCCCcEEEEE---CChHHHHHh---
Confidence            35668999998754 556666 55565556899999999988887663 21       1111111   233332322   


Q ss_pred             HhCCCceEEEeCCC----------CHHHHHHHHHhcccCCEEEEEc
Q 017868          251 AMGTGIDVSFDCAG----------LNKTMSTALGATCAGGKVCLVG  286 (365)
Q Consensus       251 ~~~~~~d~vid~~g----------~~~~~~~~~~~l~~~G~~~~~g  286 (365)
                       ....+|+|+-...          ....+..+.++|+++|.++...
T Consensus       148 -~~~~fD~Ii~d~~~~~~~~~~l~~~~~l~~~~~~L~pgG~lv~~~  192 (283)
T 2i7c_A          148 -VTNTYDVIIVDSSDPIGPAETLFNQNFYEKIYNALKPNGYCVAQC  192 (283)
T ss_dssp             -CCSCEEEEEEECCCTTTGGGGGSSHHHHHHHHHHEEEEEEEEEEC
T ss_pred             -CCCCceEEEEcCCCCCCcchhhhHHHHHHHHHHhcCCCcEEEEEC
Confidence             2568999985221          1356778899999999998774

>1h5q_A NADP-dependent mannitol dehydrogenase; oxidoreductase, mannitol metabolism; HET: NAP; 1.50A {Agaricus bisporus} SCOP: c.2.1.2

Probab=95.01  E-value=0.15  Score=43.40  Aligned_cols=82  Identities=17%  Similarity=0.279  Sum_probs=47.3

Q ss_pred             CCCEEEEEcC-CHHHHHHHHHHHHHCCCCeEEEEeCChhH-HHHHH----HcCCCE-EEeCCCC-cccHHHHHHHHHHHh
Q 017868          181 PETNVLIMGA-GPIGLVTMLGAPRAFGAPRIVIVDVDDYR-LSVAK----EIGADN-IVKVSTN-LQDIAEEVEKIQKAM  252 (365)
Q Consensus       181 ~g~~vlI~G~-g~~G~~ai~~l~~~~g~~~vi~v~~~~~~-~~~~~----~~g~~~-~~~~~~~-~~~~~~~i~~~~~~~  252 (365)
                      .+.++||+|+ |++|.+++..++ ..|+ .|++++++.++ .+.++    +.+... .+..+-. .+++.+.++++.+. 
T Consensus        13 ~~k~vlITGasggiG~~~a~~l~-~~G~-~V~~~~r~~~~~~~~~~~l~~~~~~~~~~~~~Dl~~~~~~~~~~~~~~~~-   89 (265)
T 1h5q_A           13 VNKTIIVTGGNRGIGLAFTRAVA-AAGA-NVAVIYRSAADAVEVTEKVGKEFGVKTKAYQCDVSNTDIVTKTIQQIDAD-   89 (265)
T ss_dssp             TTEEEEEETTTSHHHHHHHHHHH-HTTE-EEEEEESSCTTHHHHHHHHHHHHTCCEEEEECCTTCHHHHHHHHHHHHHH-
T ss_pred             CCCEEEEECCCchHHHHHHHHHH-HCCC-eEEEEeCcchhhHHHHHHHHHhcCCeeEEEEeeCCCHHHHHHHHHHHHHh-
Confidence            4578999987 999999999555 5598 56677664332 22222    234322 2222222 22333334443332 


Q ss_pred             CCCceEEEeCCCC
Q 017868          253 GTGIDVSFDCAGL  265 (365)
Q Consensus       253 ~~~~d~vid~~g~  265 (365)
                      -+++|++|.++|.
T Consensus        90 ~~~id~li~~Ag~  102 (265)
T 1h5q_A           90 LGPISGLIANAGV  102 (265)
T ss_dssp             SCSEEEEEECCCC
T ss_pred             cCCCCEEEECCCc
Confidence            3579999998873

>3qvo_A NMRA family protein; structural genomics, PSI-biology, midwest center for structu genomics, MCSG, unknown function; HET: MNB; 2.30A {Shigella flexneri 2A}

Probab=95.01  E-value=0.037  Score=46.46  Aligned_cols=95  Identities=15%  Similarity=0.162  Sum_probs=55.4

Q ss_pred             CEEEEEcC-CHHHHHHHHHHHHHCC-CCeEEEEeCChhHHHHHHHcCCCEEEeCCCCcccHHHHHHHHHHHhCCCceEEE
Q 017868          183 TNVLIMGA-GPIGLVTMLGAPRAFG-APRIVIVDVDDYRLSVAKEIGADNIVKVSTNLQDIAEEVEKIQKAMGTGIDVSF  260 (365)
Q Consensus       183 ~~vlI~G~-g~~G~~ai~~l~~~~g-~~~vi~v~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~i~~~~~~~~~~~d~vi  260 (365)
                      .+|||+|+ |.+|.++++ .+...| + .|+++.+++++.+.+..-++. .+..+-  .+. +.+++..    .++|+||
T Consensus        24 k~vlVtGatG~iG~~l~~-~L~~~G~~-~V~~~~R~~~~~~~~~~~~~~-~~~~Dl--~d~-~~~~~~~----~~~D~vv   93 (236)
T 3qvo_A           24 KNVLILGAGGQIARHVIN-QLADKQTI-KQTLFARQPAKIHKPYPTNSQ-IIMGDV--LNH-AALKQAM----QGQDIVY   93 (236)
T ss_dssp             EEEEEETTTSHHHHHHHH-HHTTCTTE-EEEEEESSGGGSCSSCCTTEE-EEECCT--TCH-HHHHHHH----TTCSEEE
T ss_pred             cEEEEEeCCcHHHHHHHH-HHHhCCCc-eEEEEEcChhhhcccccCCcE-EEEecC--CCH-HHHHHHh----cCCCEEE
Confidence            57999987 999999999 445668 6 677777777654322111221 222221  222 2343332    3789999


Q ss_pred             eCCCCHH---HHHHHHHhccc--CCEEEEEcc
Q 017868          261 DCAGLNK---TMSTALGATCA--GGKVCLVGM  287 (365)
Q Consensus       261 d~~g~~~---~~~~~~~~l~~--~G~~~~~g~  287 (365)
                      .+.+...   .....+..+..  .++++.++.
T Consensus        94 ~~a~~~~~~~~~~~~~~~~~~~~~~~iV~iSS  125 (236)
T 3qvo_A           94 ANLTGEDLDIQANSVIAAMKACDVKRLIFVLS  125 (236)
T ss_dssp             EECCSTTHHHHHHHHHHHHHHTTCCEEEEECC
T ss_pred             EcCCCCchhHHHHHHHHHHHHcCCCEEEEEec
Confidence            9888532   22334444443  367887764

>3evn_A Oxidoreductase, GFO/IDH/MOCA family; structural genomics; 2.00A {Streptococcus agalactiae serogroup V}

Probab=95.01  E-value=0.073  Score=47.24  Aligned_cols=133  Identities=14%  Similarity=0.059  Sum_probs=76.8

Q ss_pred             CEEEEEcCCHHHHHHHHHHHHHCCCCeEEEEeCChhHHH-HHHHcCCCEEEeCCCCcccHHHHHHHHHHHhCCCceEEEe
Q 017868          183 TNVLIMGAGPIGLVTMLGAPRAFGAPRIVIVDVDDYRLS-VAKEIGADNIVKVSTNLQDIAEEVEKIQKAMGTGIDVSFD  261 (365)
Q Consensus       183 ~~vlI~G~g~~G~~ai~~l~~~~g~~~vi~v~~~~~~~~-~~~~~g~~~~~~~~~~~~~~~~~i~~~~~~~~~~~d~vid  261 (365)
                      -+|.|+|+|.+|...+..+.+.-+++.+.+.++++++.+ +++++|.....      .++.+.+.      ...+|+|+.
T Consensus         6 ~rigiiG~G~ig~~~~~~l~~~~~~~~~av~d~~~~~~~~~a~~~~~~~~~------~~~~~ll~------~~~~D~V~i   73 (329)
T 3evn_A            6 VRYGVVSTAKVAPRFIEGVRLAGNGEVVAVSSRTLESAQAFANKYHLPKAY------DKLEDMLA------DESIDVIYV   73 (329)
T ss_dssp             EEEEEEBCCTTHHHHHHHHHHHCSEEEEEEECSCSSTTCC---CCCCSCEE------SCHHHHHT------CTTCCEEEE
T ss_pred             eEEEEEechHHHHHHHHHHHhCCCcEEEEEEcCCHHHHHHHHHHcCCCccc------CCHHHHhc------CCCCCEEEE
Confidence            368899999999887774555556655555677766654 55667765332      23333321      357999999


Q ss_pred             CCCCHHHHHHHHHhcccCCEEEEEccCCCCccccchH----hhhcCcEEEeec--ccCCcHHHHHHHHHcCCC
Q 017868          262 CAGLNKTMSTALGATCAGGKVCLVGMGHHEMTVPLTP----AAVREVDVVGVF--RYKNTWPLCLELLRSGKI  328 (365)
Q Consensus       262 ~~g~~~~~~~~~~~l~~~G~~~~~g~~~~~~~~~~~~----~~~~~~~i~~~~--~~~~~~~~~~~~l~~g~~  328 (365)
                      |+....+...+..++..+-+ +++.-+..........    .-.+++.+.-.+  .+...++.+.+++++|.+
T Consensus        74 ~tp~~~h~~~~~~al~aGk~-Vl~EKP~a~~~~e~~~l~~~a~~~~~~~~v~~~~r~~p~~~~~~~~i~~g~i  145 (329)
T 3evn_A           74 ATINQDHYKVAKAALLAGKH-VLVEKPFTLTYDQANELFALAESCNLFLMEAQKSVFIPMTQVIKKLLASGEI  145 (329)
T ss_dssp             CSCGGGHHHHHHHHHHTTCE-EEEESSCCSSHHHHHHHHHHHHHTTCCEEEECSSCSSHHHHHHHHHHHTTTT
T ss_pred             CCCcHHHHHHHHHHHHCCCe-EEEccCCcCCHHHHHHHHHHHHHcCCEEEEEEcccCCHHHHHHHHHHhCCCC
Confidence            99987787888888876544 4442111100101111    122333332222  235667888899999887

>2gb4_A Thiopurine S-methyltransferase; 18204406, thiopurine methyltransferase, structural genomics, PSI, protein structure initiative; HET: SAH; 1.25A {Mus musculus} PDB: 3bgi_A* 3bgd_A* 2bzg_A* 2h11_A*

Probab=95.00  E-value=0.074  Score=45.27  Aligned_cols=96  Identities=11%  Similarity=0.047  Sum_probs=60.7

Q ss_pred             CCCCCEEEEEcCCHHHHHHHHHHHHHCCCCeEEEEeCChhHHHHHHH-cCC--------------------CEEEeCCCC
Q 017868          179 IGPETNVLIMGAGPIGLVTMLGAPRAFGAPRIVIVDVDDYRLSVAKE-IGA--------------------DNIVKVSTN  237 (365)
Q Consensus       179 ~~~g~~vlI~G~g~~G~~ai~~l~~~~g~~~vi~v~~~~~~~~~~~~-~g~--------------------~~~~~~~~~  237 (365)
                      ..++.+||..|+|. |..+.. +++. |+ .|++++.++.-.+.+++ .+.                    ..+.....+
T Consensus        66 ~~~~~~vLD~GCG~-G~~~~~-La~~-G~-~V~gvD~S~~~i~~a~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~~~D  141 (252)
T 2gb4_A           66 GQSGLRVFFPLCGK-AIEMKW-FADR-GH-TVVGVEISEIGIREFFAEQNLSYTEEPLAEIAGAKVFKSSSGSISLYCCS  141 (252)
T ss_dssp             TCCSCEEEETTCTT-CTHHHH-HHHT-TC-EEEEECSCHHHHHHHHHHTTCCEEEEECTTSTTCEEEEETTSSEEEEESC
T ss_pred             CCCCCeEEEeCCCC-cHHHHH-HHHC-CC-eEEEEECCHHHHHHHHHhcccccccccccccccccccccCCCceEEEECc
Confidence            46788999998864 666666 6654 88 79999999998887754 331                    111111111


Q ss_pred             cccHHHHHHHHHHHhCCCceEEEeCCC-----C---HHHHHHHHHhcccCCEEEEE
Q 017868          238 LQDIAEEVEKIQKAMGTGIDVSFDCAG-----L---NKTMSTALGATCAGGKVCLV  285 (365)
Q Consensus       238 ~~~~~~~i~~~~~~~~~~~d~vid~~g-----~---~~~~~~~~~~l~~~G~~~~~  285 (365)
                      ..++       .....+.||+|++...     .   ...+..+.++|+++|+++++
T Consensus       142 ~~~l-------~~~~~~~FD~V~~~~~l~~l~~~~~~~~l~~~~~~LkpGG~l~l~  190 (252)
T 2gb4_A          142 IFDL-------PRANIGKFDRIWDRGALVAINPGDHDRYADIILSLLRKEFQYLVA  190 (252)
T ss_dssp             TTTG-------GGGCCCCEEEEEESSSTTTSCGGGHHHHHHHHHHTEEEEEEEEEE
T ss_pred             cccC-------CcccCCCEEEEEEhhhhhhCCHHHHHHHHHHHHHHcCCCeEEEEE
Confidence            1111       1001268999997422     1   23566788899999998654

>2b2c_A Spermidine synthase; beta-alpha, transferase; 2.50A {Caenorhabditis elegans} SCOP: c.66.1.17

Probab=95.00  E-value=0.21  Score=43.94  Aligned_cols=98  Identities=17%  Similarity=0.172  Sum_probs=62.5

Q ss_pred             CCCCEEEEEcCCHHHHHHHHHHHHHCCCCeEEEEeCChhHHHHHHHcCC--------CEEEeCCCCcccHHHHHHHHHHH
Q 017868          180 GPETNVLIMGAGPIGLVTMLGAPRAFGAPRIVIVDVDDYRLSVAKEIGA--------DNIVKVSTNLQDIAEEVEKIQKA  251 (365)
Q Consensus       180 ~~g~~vlI~G~g~~G~~ai~~l~~~~g~~~vi~v~~~~~~~~~~~~~g~--------~~~~~~~~~~~~~~~~i~~~~~~  251 (365)
                      ..+.+||+.|+|. |..+.. +++..+...+++++.+++-.+.+++.-.        ..+....   .|..+.+..    
T Consensus       107 ~~~~~VLdIG~G~-G~~~~~-l~~~~~~~~v~~vDid~~~i~~Ar~~~~~~~~~~~~~rv~~~~---~D~~~~l~~----  177 (314)
T 2b2c_A          107 PDPKRVLIIGGGD-GGILRE-VLKHESVEKVTMCEIDEMVIDVAKKFLPGMSCGFSHPKLDLFC---GDGFEFLKN----  177 (314)
T ss_dssp             SSCCEEEEESCTT-SHHHHH-HTTCTTCCEEEEECSCHHHHHHHHHHCTTTSGGGGCTTEEEEC---SCHHHHHHH----
T ss_pred             CCCCEEEEEcCCc-CHHHHH-HHHcCCCCEEEEEECCHHHHHHHHHHHHHhccccCCCCEEEEE---ChHHHHHHh----
Confidence            3557999998754 666666 6666555689999999998888876321        1121111   233333322    


Q ss_pred             hCCCceEEEeCCCC----------HHHHHHHHHhcccCCEEEEEc
Q 017868          252 MGTGIDVSFDCAGL----------NKTMSTALGATCAGGKVCLVG  286 (365)
Q Consensus       252 ~~~~~d~vid~~g~----------~~~~~~~~~~l~~~G~~~~~g  286 (365)
                      ....+|+|+.....          ...+..+.++|+++|.++...
T Consensus       178 ~~~~fD~Ii~d~~~~~~~~~~l~t~~~l~~~~~~LkpgG~lv~~~  222 (314)
T 2b2c_A          178 HKNEFDVIITDSSDPVGPAESLFGQSYYELLRDALKEDGILSSQG  222 (314)
T ss_dssp             CTTCEEEEEECCC-------------HHHHHHHHEEEEEEEEEEC
T ss_pred             cCCCceEEEEcCCCCCCcchhhhHHHHHHHHHhhcCCCeEEEEEC
Confidence            25689999853311          345678889999999998764

>1v8b_A Adenosylhomocysteinase; hydrolase; HET: NAD ADN; 2.40A {Plasmodium falciparum} SCOP: c.2.1.4 c.23.12.3

Probab=94.99  E-value=0.082  Score=49.20  Aligned_cols=93  Identities=20%  Similarity=0.194  Sum_probs=67.4

Q ss_pred             CCCCCEEEEEcCCHHHHHHHHHHHHHCCCCeEEEEeCChhHHHHHHHcCCCEEEeCCCCcccHHHHHHHHHHHhCCCceE
Q 017868          179 IGPETNVLIMGAGPIGLVTMLGAPRAFGAPRIVIVDVDDYRLSVAKEIGADNIVKVSTNLQDIAEEVEKIQKAMGTGIDV  258 (365)
Q Consensus       179 ~~~g~~vlI~G~g~~G~~ai~~l~~~~g~~~vi~v~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~i~~~~~~~~~~~d~  258 (365)
                      .-.|.+|+|.|.|.+|..+++ .++.+|+ +|++++++..+...+...|+..        .+    +.+.    -...|+
T Consensus       254 ~l~GktVgIIG~G~IG~~vA~-~l~~~G~-~Viv~d~~~~~~~~a~~~g~~~--------~~----l~el----l~~aDi  315 (479)
T 1v8b_A          254 LISGKIVVICGYGDVGKGCAS-SMKGLGA-RVYITEIDPICAIQAVMEGFNV--------VT----LDEI----VDKGDF  315 (479)
T ss_dssp             CCTTSEEEEECCSHHHHHHHH-HHHHHTC-EEEEECSCHHHHHHHHTTTCEE--------CC----HHHH----TTTCSE
T ss_pred             ccCCCEEEEEeeCHHHHHHHH-HHHhCcC-EEEEEeCChhhHHHHHHcCCEe--------cC----HHHH----HhcCCE
Confidence            457899999999999999999 7788899 6899988887754445556521        12    2222    257899


Q ss_pred             EEeCCCCHHHH-HHHHHhcccCCEEEEEccCC
Q 017868          259 SFDCAGLNKTM-STALGATCAGGKVCLVGMGH  289 (365)
Q Consensus       259 vid~~g~~~~~-~~~~~~l~~~G~~~~~g~~~  289 (365)
                      |+-+.+....+ ...+..|+++..++.++...
T Consensus       316 Vi~~~~t~~lI~~~~l~~MK~gailiNvgrg~  347 (479)
T 1v8b_A          316 FITCTGNVDVIKLEHLLKMKNNAVVGNIGHFD  347 (479)
T ss_dssp             EEECCSSSSSBCHHHHTTCCTTCEEEECSSTT
T ss_pred             EEECCChhhhcCHHHHhhcCCCcEEEEeCCCC
Confidence            99987654333 25677899999998887543

>4dll_A 2-hydroxy-3-oxopropionate reductase; structural genomics, PSI-biology, NEW YORK structural genomi research consortium, nysgrc, oxidoreductase; 2.11A {Polaromonas SP}

Probab=94.99  E-value=0.32  Score=42.91  Aligned_cols=88  Identities=14%  Similarity=0.160  Sum_probs=57.5

Q ss_pred             CCEEEEEcCCHHHHHHHHHHHHHCCCCeEEEEeCChhHHHHHHHcCCCEEEeCCCCcccHHHHHHHHHHHhCCCceEEEe
Q 017868          182 ETNVLIMGAGPIGLVTMLGAPRAFGAPRIVIVDVDDYRLSVAKEIGADNIVKVSTNLQDIAEEVEKIQKAMGTGIDVSFD  261 (365)
Q Consensus       182 g~~vlI~G~g~~G~~ai~~l~~~~g~~~vi~v~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~i~~~~~~~~~~~d~vid  261 (365)
                      ..+|.|+|+|.+|..+++ .+...|. .|.+.++++++.+.+.+.|+...       .+..+.+        ...|+||-
T Consensus        31 ~~~I~iIG~G~mG~~~a~-~l~~~G~-~V~~~dr~~~~~~~l~~~g~~~~-------~~~~e~~--------~~aDvVi~   93 (320)
T 4dll_A           31 ARKITFLGTGSMGLPMAR-RLCEAGY-ALQVWNRTPARAASLAALGATIH-------EQARAAA--------RDADIVVS   93 (320)
T ss_dssp             CSEEEEECCTTTHHHHHH-HHHHTTC-EEEEECSCHHHHHHHHTTTCEEE-------SSHHHHH--------TTCSEEEE
T ss_pred             CCEEEEECccHHHHHHHH-HHHhCCC-eEEEEcCCHHHHHHHHHCCCEee-------CCHHHHH--------hcCCEEEE
Confidence            458999999999999998 4456688 68888999998887777675321       1222211        35788888


Q ss_pred             CCCCHHHHHHHH------HhcccCCEEEEEc
Q 017868          262 CAGLNKTMSTAL------GATCAGGKVCLVG  286 (365)
Q Consensus       262 ~~g~~~~~~~~~------~~l~~~G~~~~~g  286 (365)
                      |+..+......+      ..+.++..++..+
T Consensus        94 ~vp~~~~~~~v~~~~~~~~~l~~~~~vi~~s  124 (320)
T 4dll_A           94 MLENGAVVQDVLFAQGVAAAMKPGSLFLDMA  124 (320)
T ss_dssp             CCSSHHHHHHHHTTTCHHHHCCTTCEEEECS
T ss_pred             ECCCHHHHHHHHcchhHHhhCCCCCEEEecC
Confidence            877654444333      2455555555544

>3asu_A Short-chain dehydrogenase/reductase SDR; SDR family, rossmann-fold, short-chain dehydrogenase/reducta ALLO-threonine dehydrogenase; 1.90A {Escherichia coli} PDB: 3asv_A*

Probab=94.98  E-value=0.068  Score=45.27  Aligned_cols=76  Identities=21%  Similarity=0.296  Sum_probs=46.3

Q ss_pred             EEEEEcC-CHHHHHHHHHHHHHCCCCeEEEEeCChhHHHH-HHHcCCCE-EEeCCCCcccHHHHHHHHHHH---hCCCce
Q 017868          184 NVLIMGA-GPIGLVTMLGAPRAFGAPRIVIVDVDDYRLSV-AKEIGADN-IVKVSTNLQDIAEEVEKIQKA---MGTGID  257 (365)
Q Consensus       184 ~vlI~G~-g~~G~~ai~~l~~~~g~~~vi~v~~~~~~~~~-~~~~g~~~-~~~~~~~~~~~~~~i~~~~~~---~~~~~d  257 (365)
                      ++||+|+ +++|.++++.++ ..|+ .|+.+++++++.+. .++++... .+..+-.  +. +.++++.+.   .-+++|
T Consensus         2 ~vlVTGas~gIG~aia~~l~-~~G~-~V~~~~r~~~~~~~~~~~~~~~~~~~~~Dv~--~~-~~v~~~~~~~~~~~g~iD   76 (248)
T 3asu_A            2 IVLVTGATAGFGECITRRFI-QQGH-KVIATGRRQERLQELKDELGDNLYIAQLDVR--NR-AAIEEMLASLPAEWCNID   76 (248)
T ss_dssp             EEEETTTTSTTHHHHHHHHH-HTTC-EEEEEESCHHHHHHHHHHHCTTEEEEECCTT--CH-HHHHHHHHTSCTTTCCCC
T ss_pred             EEEEECCCChHHHHHHHHHH-HCCC-EEEEEeCCHHHHHHHHHHhcCceEEEEcCCC--CH-HHHHHHHHHHHHhCCCCC
Confidence            6889987 999999999555 5698 57777788776553 34454322 2222222  21 223333221   124799


Q ss_pred             EEEeCCC
Q 017868          258 VSFDCAG  264 (365)
Q Consensus       258 ~vid~~g  264 (365)
                      ++|.++|
T Consensus        77 ~lvnnAg   83 (248)
T 3asu_A           77 ILVNNAG   83 (248)
T ss_dssp             EEEECCC
T ss_pred             EEEECCC
Confidence            9999887

>3s8m_A Enoyl-ACP reductase; rossmann fold, oxidoreductase, NADH binding, fatty acid SYNT enoyl-ACP; 1.60A {Xanthomonas oryzae PV}

Probab=94.98  E-value=0.14  Score=46.80  Aligned_cols=89  Identities=24%  Similarity=0.237  Sum_probs=54.4

Q ss_pred             hcCC-CCCCEEEEEcC-CHHHHHHHHHHHHHCCCCeEEEEeCChhH----------------HHHHHHcCCCEE-EeCCC
Q 017868          176 RANI-GPETNVLIMGA-GPIGLVTMLGAPRAFGAPRIVIVDVDDYR----------------LSVAKEIGADNI-VKVST  236 (365)
Q Consensus       176 ~~~~-~~g~~vlI~G~-g~~G~~ai~~l~~~~g~~~vi~v~~~~~~----------------~~~~~~~g~~~~-~~~~~  236 (365)
                      ...+ +.++++||+|+ +++|.+++..+++..|+ .|+.++++.+.                .+.+++.|.... +..+-
T Consensus        54 ~~~~~~~gKvaLVTGASsGIG~AiA~~LA~~~GA-~Vv~~~r~~~~~~~~~~~ag~~n~~a~~~~~~~~G~~a~~i~~Dv  132 (422)
T 3s8m_A           54 RGVRNDGPKKVLVIGASSGYGLASRITAAFGFGA-DTLGVFFEKPGTASKAGTAGWYNSAAFDKHAKAAGLYSKSINGDA  132 (422)
T ss_dssp             TCCCSSSCSEEEEESCSSHHHHHHHHHHHHHHCC-EEEEEECCCCCCSSSCCCHHHHHHHHHHHHHHHTTCCEEEEESCT
T ss_pred             ccccccCCCEEEEECCChHHHHHHHHHHHHhCCC-EEEEEeCCchhhhhhhcccccchhHHHHHHHHhcCCcEEEEEecC
Confidence            3455 35678899987 89999999966652699 56666554321                144566675432 32222


Q ss_pred             -CcccHHHHHHHHHHHhCCCceEEEeCCCC
Q 017868          237 -NLQDIAEEVEKIQKAMGTGIDVSFDCAGL  265 (365)
Q Consensus       237 -~~~~~~~~i~~~~~~~~~~~d~vid~~g~  265 (365)
                       +.++....+.++.+..++++|++++++|.
T Consensus       133 td~~~v~~~v~~i~~~~~G~IDiLVNNAG~  162 (422)
T 3s8m_A          133 FSDAARAQVIELIKTEMGGQVDLVVYSLAS  162 (422)
T ss_dssp             TSHHHHHHHHHHHHHHSCSCEEEEEECCCC
T ss_pred             CCHHHHHHHHHHHHHHcCCCCCEEEEcCcc
Confidence             22334444444444333689999998875

>3qlj_A Short chain dehydrogenase; structural genomics, seattle structural genomics center for infectious disease, ssgcid, tuberculosis; 1.80A {Mycobacterium avium}

Probab=94.97  E-value=0.14  Score=45.20  Aligned_cols=82  Identities=24%  Similarity=0.351  Sum_probs=48.2

Q ss_pred             CCCCEEEEEcC-CHHHHHHHHHHHHHCCCCeEEEEeCC----------hhHH----HHHHHcCCCEE-EeCCC-CcccHH
Q 017868          180 GPETNVLIMGA-GPIGLVTMLGAPRAFGAPRIVIVDVD----------DYRL----SVAKEIGADNI-VKVST-NLQDIA  242 (365)
Q Consensus       180 ~~g~~vlI~G~-g~~G~~ai~~l~~~~g~~~vi~v~~~----------~~~~----~~~~~~g~~~~-~~~~~-~~~~~~  242 (365)
                      -.|.++||+|+ +++|.+++..++ ..|+ .|+.++++          .++.    +.+++.+.... +..+- +.++..
T Consensus        25 l~gk~vlVTGas~GIG~aia~~la-~~G~-~Vv~~~r~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~Dv~d~~~v~  102 (322)
T 3qlj_A           25 VDGRVVIVTGAGGGIGRAHALAFA-AEGA-RVVVNDIGVGLDGSPASGGSAAQSVVDEITAAGGEAVADGSNVADWDQAA  102 (322)
T ss_dssp             TTTCEEEETTTTSHHHHHHHHHHH-HTTC-EEEEECCCBCTTSSBTCTTSHHHHHHHHHHHTTCEEEEECCCTTSHHHHH
T ss_pred             cCCCEEEEECCCcHHHHHHHHHHH-HCCC-EEEEEeCcccccccccccHHHHHHHHHHHHhcCCcEEEEECCCCCHHHHH
Confidence            35788999987 999999999555 5599 57777654          2222    22333443322 11121 222333


Q ss_pred             HHHHHHHHHhCCCceEEEeCCC
Q 017868          243 EEVEKIQKAMGTGIDVSFDCAG  264 (365)
Q Consensus       243 ~~i~~~~~~~~~~~d~vid~~g  264 (365)
                      +.++++.+.. +++|++|.++|
T Consensus       103 ~~~~~~~~~~-g~iD~lv~nAg  123 (322)
T 3qlj_A          103 GLIQTAVETF-GGLDVLVNNAG  123 (322)
T ss_dssp             HHHHHHHHHH-SCCCEEECCCC
T ss_pred             HHHHHHHHHc-CCCCEEEECCC
Confidence            3344443332 48999999888

>3u9l_A 3-oxoacyl-[acyl-carrier-protein] reductase; structural genomics, PSI-biology, NEW YORK structural genomi research consortium, nysgrc; 2.10A {Sinorhizobium meliloti}

Probab=94.96  E-value=0.14  Score=45.21  Aligned_cols=80  Identities=21%  Similarity=0.278  Sum_probs=47.1

Q ss_pred             CCEEEEEcC-CHHHHHHHHHHHHHCCCCeEEEEeCC-----hhHHHH----HHHcCCCE-EEeCCC-CcccHHHHHHHHH
Q 017868          182 ETNVLIMGA-GPIGLVTMLGAPRAFGAPRIVIVDVD-----DYRLSV----AKEIGADN-IVKVST-NLQDIAEEVEKIQ  249 (365)
Q Consensus       182 g~~vlI~G~-g~~G~~ai~~l~~~~g~~~vi~v~~~-----~~~~~~----~~~~g~~~-~~~~~~-~~~~~~~~i~~~~  249 (365)
                      +.++||+|+ |++|.++++.++ ..|+ +|+++.++     .++.+.    ++..+... .+..+- +.+++.+.++++.
T Consensus         5 ~k~vlVTGas~GIG~aia~~L~-~~G~-~V~~~~r~~~~r~~~~~~~l~~~~~~~~~~~~~~~~Dvtd~~~v~~~~~~~~   82 (324)
T 3u9l_A            5 KKIILITGASSGFGRLTAEALA-GAGH-RVYASMRDIVGRNASNVEAIAGFARDNDVDLRTLELDVQSQVSVDRAIDQII   82 (324)
T ss_dssp             CCEEEESSCSSHHHHHHHHHHH-HTTC-EEEEEESCTTTTTHHHHHHHHHHHHHHTCCEEEEECCTTCHHHHHHHHHHHH
T ss_pred             CCEEEEECCCcHHHHHHHHHHH-HCCC-EEEEecCcccccCHHHHHHHHHHHHhcCCcEEEEEeecCCHHHHHHHHHHHH
Confidence            578999987 999999999554 5699 46655443     333332    23334322 222222 2234444444444


Q ss_pred             HHhCCCceEEEeCCC
Q 017868          250 KAMGTGIDVSFDCAG  264 (365)
Q Consensus       250 ~~~~~~~d~vid~~g  264 (365)
                      +.. +++|++|.++|
T Consensus        83 ~~~-g~iD~lVnnAG   96 (324)
T 3u9l_A           83 GED-GRIDVLIHNAG   96 (324)
T ss_dssp             HHH-SCCSEEEECCC
T ss_pred             HHc-CCCCEEEECCC
Confidence            332 58999999988

>1zud_1 Adenylyltransferase THIF; thiamin, thiazole, protein-protein complex, THIF, TRAN biosynthetic protein complex; 1.98A {Escherichia coli} PDB: 1zfn_A* 1zkm_A

Probab=94.96  E-value=0.12  Score=43.91  Aligned_cols=34  Identities=32%  Similarity=0.520  Sum_probs=28.1

Q ss_pred             CCEEEEEcCCHHHHHHHHHHHHHCCCCeEEEEeCC
Q 017868          182 ETNVLIMGAGPIGLVTMLGAPRAFGAPRIVIVDVD  216 (365)
Q Consensus       182 g~~vlI~G~g~~G~~ai~~l~~~~g~~~vi~v~~~  216 (365)
                      +.+|+|.|+|++|..++. .+...|...+..+|.+
T Consensus        28 ~~~VlvvG~GglG~~va~-~La~~Gvg~i~lvD~d   61 (251)
T 1zud_1           28 DSQVLIIGLGGLGTPAAL-YLAGAGVGTLVLADDD   61 (251)
T ss_dssp             TCEEEEECCSTTHHHHHH-HHHHTTCSEEEEECCC
T ss_pred             cCcEEEEccCHHHHHHHH-HHHHcCCCeEEEEeCC
Confidence            469999999999999999 5557799888888654

>2yxl_A PH0851 protein, 450AA long hypothetical FMU protein; FMU-homolog, methyltransferase, structural genomics, NPPSFA; HET: SFG; 2.55A {Pyrococcus horikoshii}

Probab=94.94  E-value=0.15  Score=47.31  Aligned_cols=104  Identities=19%  Similarity=0.233  Sum_probs=64.9

Q ss_pred             HhcCCCCCCEEEEEcCCHHHHHHHHHHHHHCCC-CeEEEEeCChhHHHHH----HHcCCCEEEeCCCCcccHHHHHHHHH
Q 017868          175 RRANIGPETNVLIMGAGPIGLVTMLGAPRAFGA-PRIVIVDVDDYRLSVA----KEIGADNIVKVSTNLQDIAEEVEKIQ  249 (365)
Q Consensus       175 ~~~~~~~g~~vlI~G~g~~G~~ai~~l~~~~g~-~~vi~v~~~~~~~~~~----~~~g~~~~~~~~~~~~~~~~~i~~~~  249 (365)
                      ....+++|++||-.|+|+ |..+.+ ++..++- ..+++++.++.+.+.+    +.+|...+.....+..++...   + 
T Consensus       253 ~~l~~~~g~~VLDlgaG~-G~~t~~-la~~~~~~~~v~a~D~s~~~l~~~~~~~~~~g~~~v~~~~~D~~~~~~~---~-  326 (450)
T 2yxl_A          253 IVLDPKPGETVVDLAAAP-GGKTTH-LAELMKNKGKIYAFDVDKMRMKRLKDFVKRMGIKIVKPLVKDARKAPEI---I-  326 (450)
T ss_dssp             HHHCCCTTCEEEESSCTT-CHHHHH-HHHHTTTCSEEEEECSCHHHHHHHHHHHHHTTCCSEEEECSCTTCCSSS---S-
T ss_pred             HhcCCCCcCEEEEeCCCc-cHHHHH-HHHHcCCCCEEEEEcCCHHHHHHHHHHHHHcCCCcEEEEEcChhhcchh---h-
Confidence            445678999998887755 555666 5555442 4899999999887654    445764333222222221100   0 


Q ss_pred             HHhCCCceEEEe---CCCC-------------------------HHHHHHHHHhcccCCEEEEEc
Q 017868          250 KAMGTGIDVSFD---CAGL-------------------------NKTMSTALGATCAGGKVCLVG  286 (365)
Q Consensus       250 ~~~~~~~d~vid---~~g~-------------------------~~~~~~~~~~l~~~G~~~~~g  286 (365)
                        .+..+|.|+-   |+|.                         ...+..+.+.|+++|+++...
T Consensus       327 --~~~~fD~Vl~D~Pcsg~g~~~~~pd~~~~~~~~~~~~l~~~q~~iL~~a~~~LkpGG~lvy~t  389 (450)
T 2yxl_A          327 --GEEVADKVLLDAPCTSSGTIGKNPELRWRLREDKINEMSQLQRELLESAARLVKPGGRLLYTT  389 (450)
T ss_dssp             --CSSCEEEEEEECCCCCGGGTTTSTTHHHHCCTTSHHHHHHHHHHHHHHHHTTEEEEEEEEEEE
T ss_pred             --ccCCCCEEEEcCCCCCCeeeccChhhhhhCCHHHHHHHHHHHHHHHHHHHHhcCCCcEEEEEe
Confidence              1256999985   4442                         235677888999999998754

>3pef_A 6-phosphogluconate dehydrogenase, NAD-binding; gamma-hydroxybutyrate dehydrogenase, succinic semialdehyde R geobacter metallireducens; HET: NAP; 2.07A {Geobacter metallireducens}

Probab=94.93  E-value=0.25  Score=42.73  Aligned_cols=86  Identities=14%  Similarity=0.116  Sum_probs=55.5

Q ss_pred             CEEEEEcCCHHHHHHHHHHHHHCCCCeEEEEeCChhHHHHHHHcCCCEEEeCCCCcccHHHHHHHHHHHhCCCceEEEeC
Q 017868          183 TNVLIMGAGPIGLVTMLGAPRAFGAPRIVIVDVDDYRLSVAKEIGADNIVKVSTNLQDIAEEVEKIQKAMGTGIDVSFDC  262 (365)
Q Consensus       183 ~~vlI~G~g~~G~~ai~~l~~~~g~~~vi~v~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~i~~~~~~~~~~~d~vid~  262 (365)
                      .+|.|+|+|.+|...+. .+...|. .|.+.++++++.+.+.+.|+...       .+..+.+        ...|+||-|
T Consensus         2 ~~i~iIG~G~mG~~~a~-~l~~~G~-~V~~~dr~~~~~~~~~~~g~~~~-------~~~~~~~--------~~aDvvi~~   64 (287)
T 3pef_A            2 QKFGFIGLGIMGSAMAK-NLVKAGC-SVTIWNRSPEKAEELAALGAERA-------ATPCEVV--------ESCPVTFAM   64 (287)
T ss_dssp             CEEEEECCSHHHHHHHH-HHHHTTC-EEEEECSSGGGGHHHHHTTCEEC-------SSHHHHH--------HHCSEEEEC
T ss_pred             CEEEEEeecHHHHHHHH-HHHHCCC-eEEEEcCCHHHHHHHHHCCCeec-------CCHHHHH--------hcCCEEEEE
Confidence            47899999999999998 4456687 67888999988887777665321       1222222        236788887


Q ss_pred             CCCHHHHHHHH-------HhcccCCEEEEE
Q 017868          263 AGLNKTMSTAL-------GATCAGGKVCLV  285 (365)
Q Consensus       263 ~g~~~~~~~~~-------~~l~~~G~~~~~  285 (365)
                      +..+......+       ..+.++..++..
T Consensus        65 vp~~~~~~~v~~~~~~l~~~l~~~~~vi~~   94 (287)
T 3pef_A           65 LADPAAAEEVCFGKHGVLEGIGEGRGYVDM   94 (287)
T ss_dssp             CSSHHHHHHHHHSTTCHHHHCCTTCEEEEC
T ss_pred             cCCHHHHHHHHcCcchHhhcCCCCCEEEeC
Confidence            77543444333       345555555444

>2o07_A Spermidine synthase; structural genomics, structural genomics consortium, SGC, transferase; HET: SPD MTA; 1.89A {Homo sapiens} SCOP: c.66.1.17 PDB: 2o06_A* 2o05_A* 2o0l_A* 3rw9_A*

Probab=94.93  E-value=0.15  Score=44.70  Aligned_cols=99  Identities=19%  Similarity=0.186  Sum_probs=62.6

Q ss_pred             CCCCCEEEEEcCCHHHHHHHHHHHHHCCCCeEEEEeCChhHHHHHHHcC--------CCEEEeCCCCcccHHHHHHHHHH
Q 017868          179 IGPETNVLIMGAGPIGLVTMLGAPRAFGAPRIVIVDVDDYRLSVAKEIG--------ADNIVKVSTNLQDIAEEVEKIQK  250 (365)
Q Consensus       179 ~~~g~~vlI~G~g~~G~~ai~~l~~~~g~~~vi~v~~~~~~~~~~~~~g--------~~~~~~~~~~~~~~~~~i~~~~~  250 (365)
                      ...+.+||+.|+|. |..+.. +++..+...+++++.+++..+.+++.-        ...+....   .|..+.+..   
T Consensus        93 ~~~~~~VLdiG~G~-G~~~~~-l~~~~~~~~v~~vDid~~~i~~ar~~~~~~~~~~~~~rv~v~~---~Da~~~l~~---  164 (304)
T 2o07_A           93 HPNPRKVLIIGGGD-GGVLRE-VVKHPSVESVVQCEIDEDVIQVSKKFLPGMAIGYSSSKLTLHV---GDGFEFMKQ---  164 (304)
T ss_dssp             SSSCCEEEEEECTT-SHHHHH-HTTCTTCCEEEEEESCHHHHHHHHHHCHHHHGGGGCTTEEEEE---SCHHHHHHT---
T ss_pred             CCCCCEEEEECCCc-hHHHHH-HHHcCCCCEEEEEECCHHHHHHHHHHhHHhhcccCCCcEEEEE---CcHHHHHhh---
Confidence            45668999998754 666666 666655568999999998888776531        11111111   232222221   


Q ss_pred             HhCCCceEEEeCCCC----------HHHHHHHHHhcccCCEEEEEc
Q 017868          251 AMGTGIDVSFDCAGL----------NKTMSTALGATCAGGKVCLVG  286 (365)
Q Consensus       251 ~~~~~~d~vid~~g~----------~~~~~~~~~~l~~~G~~~~~g  286 (365)
                       ....+|+|+.....          ...+..+.++|+++|.++...
T Consensus       165 -~~~~fD~Ii~d~~~~~~~~~~l~~~~~l~~~~~~LkpgG~lv~~~  209 (304)
T 2o07_A          165 -NQDAFDVIITDSSDPMGPAESLFKESYYQLMKTALKEDGVLCCQG  209 (304)
T ss_dssp             -CSSCEEEEEEECC-----------CHHHHHHHHHEEEEEEEEEEE
T ss_pred             -CCCCceEEEECCCCCCCcchhhhHHHHHHHHHhccCCCeEEEEec
Confidence             24679999842221          235778889999999998764

>3dqp_A Oxidoreductase YLBE; alpha-beta protein., structural genomics, PSI-2, protein structure initiative; 1.40A {Lactococcus lactis subsp}

Probab=94.89  E-value=0.057  Score=44.62  Aligned_cols=93  Identities=15%  Similarity=0.166  Sum_probs=54.8

Q ss_pred             EEEEEcC-CHHHHHHHHHHHHHCCCCeEEEEeCChhHHHHHHHcCCCEEEeCCCCcccHHHHHHHHHHHhCCCceEEEeC
Q 017868          184 NVLIMGA-GPIGLVTMLGAPRAFGAPRIVIVDVDDYRLSVAKEIGADNIVKVSTNLQDIAEEVEKIQKAMGTGIDVSFDC  262 (365)
Q Consensus       184 ~vlI~G~-g~~G~~ai~~l~~~~g~~~vi~v~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~i~~~~~~~~~~~d~vid~  262 (365)
                      +|||+|+ |.+|..+++ .+...|. .|+++++++++.+..   .-...+..+-  .+..+.+++.    -.++|+||.+
T Consensus         2 ~ilItGatG~iG~~l~~-~L~~~g~-~V~~~~R~~~~~~~~---~~~~~~~~D~--~d~~~~~~~~----~~~~d~vi~~   70 (219)
T 3dqp_A            2 KIFIVGSTGRVGKSLLK-SLSTTDY-QIYAGARKVEQVPQY---NNVKAVHFDV--DWTPEEMAKQ----LHGMDAIINV   70 (219)
T ss_dssp             EEEEESTTSHHHHHHHH-HHTTSSC-EEEEEESSGGGSCCC---TTEEEEECCT--TSCHHHHHTT----TTTCSEEEEC
T ss_pred             eEEEECCCCHHHHHHHH-HHHHCCC-EEEEEECCccchhhc---CCceEEEecc--cCCHHHHHHH----HcCCCEEEEC
Confidence            6899987 999999999 4456688 677787877654322   2122233222  2212333333    2479999999


Q ss_pred             CCCHH---------HHHHHHHhcccC--CEEEEEcc
Q 017868          263 AGLNK---------TMSTALGATCAG--GKVCLVGM  287 (365)
Q Consensus       263 ~g~~~---------~~~~~~~~l~~~--G~~~~~g~  287 (365)
                      +|...         .....++.+...  ++++.++.
T Consensus        71 ag~~~~~~~~~n~~~~~~l~~a~~~~~~~~iv~~SS  106 (219)
T 3dqp_A           71 SGSGGKSLLKVDLYGAVKLMQAAEKAEVKRFILLST  106 (219)
T ss_dssp             CCCTTSSCCCCCCHHHHHHHHHHHHTTCCEEEEECC
T ss_pred             CcCCCCCcEeEeHHHHHHHHHHHHHhCCCEEEEECc
Confidence            88431         123344444333  57887764

>1xq6_A Unknown protein; structural genomics, protein structure initiative, CESG, AT5G02240, NADP, center for eukaryotic structural genomics; HET: NAP; 1.80A {Arabidopsis thaliana} SCOP: c.2.1.2 PDB: 1ybm_A* 2q46_A* 2q4b_A*

Probab=94.86  E-value=0.16  Score=42.66  Aligned_cols=74  Identities=16%  Similarity=0.042  Sum_probs=45.2

Q ss_pred             CCCEEEEEcC-CHHHHHHHHHHHHHC-CCCeEEEEeCChhHHHHHHHcCCCEEEeCCCCcccHHHHHHHHHHHhCCCceE
Q 017868          181 PETNVLIMGA-GPIGLVTMLGAPRAF-GAPRIVIVDVDDYRLSVAKEIGADNIVKVSTNLQDIAEEVEKIQKAMGTGIDV  258 (365)
Q Consensus       181 ~g~~vlI~G~-g~~G~~ai~~l~~~~-g~~~vi~v~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~i~~~~~~~~~~~d~  258 (365)
                      .+.+|||+|+ |.+|..+++.+++.- |+ .|+++++++++.+.+ .-++.. +..+-  .+. +.+.+..    .++|+
T Consensus         3 ~~~~ilVtGasG~iG~~l~~~l~~~~~g~-~V~~~~r~~~~~~~~-~~~~~~-~~~D~--~d~-~~~~~~~----~~~d~   72 (253)
T 1xq6_A            3 NLPTVLVTGASGRTGQIVYKKLKEGSDKF-VAKGLVRSAQGKEKI-GGEADV-FIGDI--TDA-DSINPAF----QGIDA   72 (253)
T ss_dssp             SCCEEEEESTTSHHHHHHHHHHHHTTTTC-EEEEEESCHHHHHHT-TCCTTE-EECCT--TSH-HHHHHHH----TTCSE
T ss_pred             CCCEEEEEcCCcHHHHHHHHHHHhcCCCc-EEEEEEcCCCchhhc-CCCeeE-EEecC--CCH-HHHHHHH----cCCCE
Confidence            4678999987 999999999454432 67 677777877665432 112222 22221  122 2343332    36999


Q ss_pred             EEeCCC
Q 017868          259 SFDCAG  264 (365)
Q Consensus       259 vid~~g  264 (365)
                      ||.++|
T Consensus        73 vi~~a~   78 (253)
T 1xq6_A           73 LVILTS   78 (253)
T ss_dssp             EEECCC
T ss_pred             EEEecc
Confidence            999887

>1inl_A Spermidine synthase; beta-barrel, rossman fold, structural genomics, PSI, protein structure initiative; 1.50A {Thermotoga maritima} SCOP: c.66.1.17 PDB: 1jq3_A*

Probab=94.84  E-value=0.13  Score=44.79  Aligned_cols=98  Identities=17%  Similarity=0.132  Sum_probs=61.4

Q ss_pred             CCCCEEEEEcCCHHHHHHHHHHHHHCCCCeEEEEeCChhHHHHHHHcC--------CCEEEeCCCCcccHHHHHHHHHHH
Q 017868          180 GPETNVLIMGAGPIGLVTMLGAPRAFGAPRIVIVDVDDYRLSVAKEIG--------ADNIVKVSTNLQDIAEEVEKIQKA  251 (365)
Q Consensus       180 ~~g~~vlI~G~g~~G~~ai~~l~~~~g~~~vi~v~~~~~~~~~~~~~g--------~~~~~~~~~~~~~~~~~i~~~~~~  251 (365)
                      ..+.+||+.|+|. |..+.. +++..+...+++++.+++..+.+++.-        ...+....   .|..+.+.    .
T Consensus        89 ~~~~~VLdiG~G~-G~~~~~-l~~~~~~~~v~~vDid~~~~~~a~~~~~~~~~~~~~~~v~~~~---~D~~~~l~----~  159 (296)
T 1inl_A           89 PNPKKVLIIGGGD-GGTLRE-VLKHDSVEKAILCEVDGLVIEAARKYLKQTSCGFDDPRAEIVI---ANGAEYVR----K  159 (296)
T ss_dssp             SSCCEEEEEECTT-CHHHHH-HTTSTTCSEEEEEESCHHHHHHHHHHCHHHHGGGGCTTEEEEE---SCHHHHGG----G
T ss_pred             CCCCEEEEEcCCc-CHHHHH-HHhcCCCCEEEEEECCHHHHHHHHHHhHhhccccCCCceEEEE---CcHHHHHh----h
Confidence            3458999998754 556666 666656668999999998888776531        11111111   22222221    1


Q ss_pred             hCCCceEEEeCCC-----------CHHHHHHHHHhcccCCEEEEEc
Q 017868          252 MGTGIDVSFDCAG-----------LNKTMSTALGATCAGGKVCLVG  286 (365)
Q Consensus       252 ~~~~~d~vid~~g-----------~~~~~~~~~~~l~~~G~~~~~g  286 (365)
                      ....+|+|+-...           ....+..+.++|+++|.++...
T Consensus       160 ~~~~fD~Ii~d~~~~~~~~~~~l~~~~~l~~~~~~LkpgG~lv~~~  205 (296)
T 1inl_A          160 FKNEFDVIIIDSTDPTAGQGGHLFTEEFYQACYDALKEDGVFSAET  205 (296)
T ss_dssp             CSSCEEEEEEEC----------CCSHHHHHHHHHHEEEEEEEEEEC
T ss_pred             CCCCceEEEEcCCCcccCchhhhhHHHHHHHHHHhcCCCcEEEEEc
Confidence            2467999984221           1346678889999999998863

>1zmo_A Halohydrin dehalogenase; haloalcohol dehalogenase, short- chain dehydrogenase/reductase family, lyase; 2.00A {Arthrobacter SP}

Probab=94.84  E-value=0.095  Score=44.18  Aligned_cols=75  Identities=17%  Similarity=0.066  Sum_probs=47.5

Q ss_pred             CCEEEEEcC-CHHHHHHHHHHHHHCCCCeEEEE-e--CChhHHHH-HHHc-CCCEEEeCCCCcccHHHHHHHHHHHhCCC
Q 017868          182 ETNVLIMGA-GPIGLVTMLGAPRAFGAPRIVIV-D--VDDYRLSV-AKEI-GADNIVKVSTNLQDIAEEVEKIQKAMGTG  255 (365)
Q Consensus       182 g~~vlI~G~-g~~G~~ai~~l~~~~g~~~vi~v-~--~~~~~~~~-~~~~-g~~~~~~~~~~~~~~~~~i~~~~~~~~~~  255 (365)
                      +.++||+|+ +++|.++++.++ ..|+ +|+.+ +  +++++.+. .+++ +.+ +.    +.++....++++.+. -++
T Consensus         1 ~k~vlVTGas~gIG~~ia~~l~-~~G~-~V~~~~~~~r~~~~~~~~~~~~~~~~-~~----~~~~v~~~~~~~~~~-~g~   72 (244)
T 1zmo_A            1 MVIALVTHARHFAGPAAVEALT-QDGY-TVVCHDASFADAAERQRFESENPGTI-AL----AEQKPERLVDATLQH-GEA   72 (244)
T ss_dssp             -CEEEESSTTSTTHHHHHHHHH-HTTC-EEEECCGGGGSHHHHHHHHHHSTTEE-EC----CCCCGGGHHHHHGGG-SSC
T ss_pred             CCEEEEECCCChHHHHHHHHHH-HCCC-EEEEecCCcCCHHHHHHHHHHhCCCc-cc----CHHHHHHHHHHHHHH-cCC
Confidence            467899987 999999999554 5699 57777 5  77766553 3455 322 21    223444444444332 357


Q ss_pred             ceEEEeCCC
Q 017868          256 IDVSFDCAG  264 (365)
Q Consensus       256 ~d~vid~~g  264 (365)
                      +|++|.++|
T Consensus        73 iD~lv~~Ag   81 (244)
T 1zmo_A           73 IDTIVSNDY   81 (244)
T ss_dssp             EEEEEECCC
T ss_pred             CCEEEECCC
Confidence            999999887

>3orh_A Guanidinoacetate N-methyltransferase; structura genomics, structural genomics consortium, SGC; HET: SAH; 1.86A {Homo sapiens} PDB: 1xcj_A* 1xcl_A* 1p1c_A* 1p1b_A* 1khh_A*

Probab=94.82  E-value=0.013  Score=49.38  Aligned_cols=99  Identities=14%  Similarity=0.110  Sum_probs=62.4

Q ss_pred             CCCCCEEEEEcCCHHHHHHHHHHHHHCCCCeEEEEeCChhHHHHHHHcCCC---EEEeCCCCcccHHHHHHHHHHHhCCC
Q 017868          179 IGPETNVLIMGAGPIGLVTMLGAPRAFGAPRIVIVDVDDYRLSVAKEIGAD---NIVKVSTNLQDIAEEVEKIQKAMGTG  255 (365)
Q Consensus       179 ~~~g~~vlI~G~g~~G~~ai~~l~~~~g~~~vi~v~~~~~~~~~~~~~g~~---~~~~~~~~~~~~~~~i~~~~~~~~~~  255 (365)
                      ..+|.+||-+|+|. |..+.. +++..+. .+++++.+++-.+.+++....   .+....   .++...+..   .....
T Consensus        58 ~~~G~rVLdiG~G~-G~~~~~-~~~~~~~-~v~~id~~~~~~~~a~~~~~~~~~~~~~~~---~~a~~~~~~---~~~~~  128 (236)
T 3orh_A           58 SSKGGRVLEVGFGM-AIAASK-VQEAPID-EHWIIECNDGVFQRLRDWAPRQTHKVIPLK---GLWEDVAPT---LPDGH  128 (236)
T ss_dssp             TTTCEEEEEECCTT-SHHHHH-HTTSCEE-EEEEEECCHHHHHHHHHHGGGCSSEEEEEE---SCHHHHGGG---SCTTC
T ss_pred             ccCCCeEEEECCCc-cHHHHH-HHHhCCc-EEEEEeCCHHHHHHHHHHHhhCCCceEEEe---ehHHhhccc---ccccC
Confidence            36889999999864 666666 6665454 688999999888888764321   111111   122222211   12457


Q ss_pred             ceEE-EeCCCC----------HHHHHHHHHhcccCCEEEEEc
Q 017868          256 IDVS-FDCAGL----------NKTMSTALGATCAGGKVCLVG  286 (365)
Q Consensus       256 ~d~v-id~~g~----------~~~~~~~~~~l~~~G~~~~~g  286 (365)
                      ||.| +|+...          ...+..+.++|+|||+++.+.
T Consensus       129 FD~i~~D~~~~~~~~~~~~~~~~~~~e~~rvLkPGG~l~f~~  170 (236)
T 3orh_A          129 FDGILYDTYPLSEETWHTHQFNFIKNHAFRLLKPGGVLTYCN  170 (236)
T ss_dssp             EEEEEECCCCCBGGGTTTHHHHHHHHTHHHHEEEEEEEEECC
T ss_pred             CceEEEeeeecccchhhhcchhhhhhhhhheeCCCCEEEEEe
Confidence            9988 454321          234567889999999998764

>1xxl_A YCGJ protein; structural genomics, protein structure initiative, PSI, NEW YORK SGX research center for structural genomics, nysgxrc; 2.10A {Bacillus subtilis} SCOP: c.66.1.41 PDB: 2glu_A*

Probab=94.80  E-value=0.11  Score=43.58  Aligned_cols=103  Identities=18%  Similarity=0.184  Sum_probs=67.1

Q ss_pred             HHHhcCCCCCCEEEEEcCCHHHHHHHHHHHHHCCCCeEEEEeCChhHHHHHHH----cCCCEEEeCCCCcccHHHHHHHH
Q 017868          173 ACRRANIGPETNVLIMGAGPIGLVTMLGAPRAFGAPRIVIVDVDDYRLSVAKE----IGADNIVKVSTNLQDIAEEVEKI  248 (365)
Q Consensus       173 ~~~~~~~~~g~~vlI~G~g~~G~~ai~~l~~~~g~~~vi~v~~~~~~~~~~~~----~g~~~~~~~~~~~~~~~~~i~~~  248 (365)
                      .++..+++++.+||-.|+|. |..+.. +++. +. .+++++.+++..+.+++    .+...+.....+..++.      
T Consensus        13 ~~~~~~~~~~~~vLDiGcG~-G~~~~~-l~~~-~~-~v~~vD~s~~~~~~a~~~~~~~~~~~v~~~~~d~~~~~------   82 (239)
T 1xxl_A           13 MIKTAECRAEHRVLDIGAGA-GHTALA-FSPY-VQ-ECIGVDATKEMVEVASSFAQEKGVENVRFQQGTAESLP------   82 (239)
T ss_dssp             HHHHHTCCTTCEEEEESCTT-SHHHHH-HGGG-SS-EEEEEESCHHHHHHHHHHHHHHTCCSEEEEECBTTBCC------
T ss_pred             HHHHhCcCCCCEEEEEccCc-CHHHHH-HHHh-CC-EEEEEECCHHHHHHHHHHHHHcCCCCeEEEecccccCC------
Confidence            44667789999999999865 777777 6655 44 79999999887766544    24332211111111210      


Q ss_pred             HHHhCCCceEEEeCCC------CHHHHHHHHHhcccCCEEEEEcc
Q 017868          249 QKAMGTGIDVSFDCAG------LNKTMSTALGATCAGGKVCLVGM  287 (365)
Q Consensus       249 ~~~~~~~~d~vid~~g------~~~~~~~~~~~l~~~G~~~~~g~  287 (365)
                        .....+|+|+....      ....+..+.++|+++|.+++...
T Consensus        83 --~~~~~fD~v~~~~~l~~~~~~~~~l~~~~~~LkpgG~l~~~~~  125 (239)
T 1xxl_A           83 --FPDDSFDIITCRYAAHHFSDVRKAVREVARVLKQDGRFLLVDH  125 (239)
T ss_dssp             --SCTTCEEEEEEESCGGGCSCHHHHHHHHHHHEEEEEEEEEEEE
T ss_pred             --CCCCcEEEEEECCchhhccCHHHHHHHHHHHcCCCcEEEEEEc
Confidence              01367999997532      13567788899999999988753

>1vpd_A Tartronate semialdehyde reductase; structural genomics, MCSG, protein structure initiative, PSI, midwest center for structural genomics; HET: MSE TLA; 1.65A {Salmonella typhimurium} SCOP: a.100.1.1 c.2.1.6

Probab=94.79  E-value=0.23  Score=43.18  Aligned_cols=86  Identities=14%  Similarity=0.102  Sum_probs=57.5

Q ss_pred             EEEEEcCCHHHHHHHHHHHHHCCCCeEEEEeCChhHHHHHHHcCCCEEEeCCCCcccHHHHHHHHHHHhCCCceEEEeCC
Q 017868          184 NVLIMGAGPIGLVTMLGAPRAFGAPRIVIVDVDDYRLSVAKEIGADNIVKVSTNLQDIAEEVEKIQKAMGTGIDVSFDCA  263 (365)
Q Consensus       184 ~vlI~G~g~~G~~ai~~l~~~~g~~~vi~v~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~i~~~~~~~~~~~d~vid~~  263 (365)
                      +|.|+|+|.+|...+. .+...|. .|.+.++++++.+.+.+.|...   .    .++.+.+        ...|+||.|+
T Consensus         7 ~i~iiG~G~~G~~~a~-~l~~~g~-~V~~~~~~~~~~~~~~~~g~~~---~----~~~~~~~--------~~~D~vi~~v   69 (299)
T 1vpd_A            7 KVGFIGLGIMGKPMSK-NLLKAGY-SLVVSDRNPEAIADVIAAGAET---A----STAKAIA--------EQCDVIITML   69 (299)
T ss_dssp             EEEEECCSTTHHHHHH-HHHHTTC-EEEEECSCHHHHHHHHHTTCEE---C----SSHHHHH--------HHCSEEEECC
T ss_pred             eEEEECchHHHHHHHH-HHHhCCC-EEEEEeCCHHHHHHHHHCCCee---c----CCHHHHH--------hCCCEEEEEC
Confidence            7899999999999888 4445687 5788889888888777766432   1    1222222        2479999998


Q ss_pred             CCHHHHHHHH-------HhcccCCEEEEEc
Q 017868          264 GLNKTMSTAL-------GATCAGGKVCLVG  286 (365)
Q Consensus       264 g~~~~~~~~~-------~~l~~~G~~~~~g  286 (365)
                      ..+......+       ..+.++..++.++
T Consensus        70 ~~~~~~~~~~~~~~~l~~~l~~~~~vv~~s   99 (299)
T 1vpd_A           70 PNSPHVKEVALGENGIIEGAKPGTVLIDMS   99 (299)
T ss_dssp             SSHHHHHHHHHSTTCHHHHCCTTCEEEECS
T ss_pred             CCHHHHHHHHhCcchHhhcCCCCCEEEECC
Confidence            8654444443       4566666665553

>3ohs_X Trans-1,2-dihydrobenzene-1,2-DIOL dehydrogenase; dimeric dihydrodiol dehydrogenase, MDD, oxidoreductase; 1.90A {Macaca fascicularis} PDB: 2o48_X 2poq_X* 2o4u_X

Probab=94.76  E-value=0.23  Score=44.08  Aligned_cols=128  Identities=14%  Similarity=0.119  Sum_probs=78.5

Q ss_pred             EEEEEcCCHHHHHHHHHHHHHCC---CCeEEEEeCChhHHH-HHHHcCCCEEEeCCCCcccHHHHHHHHHHHhCCCceEE
Q 017868          184 NVLIMGAGPIGLVTMLGAPRAFG---APRIVIVDVDDYRLS-VAKEIGADNIVKVSTNLQDIAEEVEKIQKAMGTGIDVS  259 (365)
Q Consensus       184 ~vlI~G~g~~G~~ai~~l~~~~g---~~~vi~v~~~~~~~~-~~~~~g~~~~~~~~~~~~~~~~~i~~~~~~~~~~~d~v  259 (365)
                      ++.|+|+|.+|...+. ..+..+   ++.+.+.+++.++.+ +++++|.....      .++.+.+.      ...+|+|
T Consensus         4 rigiiG~G~ig~~~~~-~l~~~~~~~~~l~av~d~~~~~a~~~a~~~~~~~~~------~~~~~ll~------~~~vD~V   70 (334)
T 3ohs_X            4 RWGIVSVGLISSDFTA-VLQTLPRSEHQVVAVAARDLSRAKEFAQKHDIPKAY------GSYEELAK------DPNVEVA   70 (334)
T ss_dssp             EEEEECCSHHHHHHHH-HHTTSCTTTEEEEEEECSSHHHHHHHHHHHTCSCEE------SSHHHHHH------CTTCCEE
T ss_pred             EEEEECchHHHHHHHH-HHHhCCCCCeEEEEEEcCCHHHHHHHHHHcCCCccc------CCHHHHhc------CCCCCEE
Confidence            6889999999998777 444433   334555677766654 66778875433      24433332      4579999


Q ss_pred             EeCCCCHHHHHHHHHhcccCCEEEEEccCCCCccccchH-------hhhcCcEEE-ee-cccCCcHHHHHHHHHcCCC
Q 017868          260 FDCAGLNKTMSTALGATCAGGKVCLVGMGHHEMTVPLTP-------AAVREVDVV-GV-FRYKNTWPLCLELLRSGKI  328 (365)
Q Consensus       260 id~~g~~~~~~~~~~~l~~~G~~~~~g~~~~~~~~~~~~-------~~~~~~~i~-~~-~~~~~~~~~~~~~l~~g~~  328 (365)
                      +.|+....+.+.+..+|..+-+ +++.=   +.......       .-.+++.+. +. ..+...++.+.+++++|.+
T Consensus        71 ~i~tp~~~H~~~~~~al~~Gkh-Vl~EK---P~a~~~~e~~~l~~~a~~~~~~~~v~~~~r~~p~~~~~k~~i~~g~i  144 (334)
T 3ohs_X           71 YVGTQHPQHKAAVMLCLAAGKA-VLCEK---PMGVNAAEVREMVTEARSRGLFLMEAIWTRFFPASEALRSVLAQGTL  144 (334)
T ss_dssp             EECCCGGGHHHHHHHHHHTTCE-EEEES---SSSSSHHHHHHHHHHHHHTTCCEEEECGGGGSHHHHHHHHHHHHTTT
T ss_pred             EECCCcHHHHHHHHHHHhcCCE-EEEEC---CCCCCHHHHHHHHHHHHHhCCEEEEEEhHhcCHHHHHHHHHHhcCCC
Confidence            9999888788888888886544 55431   11111111       112233222 22 2235668888899999887

>3gk3_A Acetoacetyl-COA reductase; acetoacetyl-CO reductase, oxidoreductase, structural genomics; 2.10A {Burkholderia pseudomallei 1710B}

Probab=94.76  E-value=0.16  Score=43.39  Aligned_cols=82  Identities=17%  Similarity=0.296  Sum_probs=46.8

Q ss_pred             CCCCEEEEEcC-CHHHHHHHHHHHHHCCCCeEEEEe-CChhHHHH-H---HHcCCC-EEEeCCC-CcccHHHHHHHHHHH
Q 017868          180 GPETNVLIMGA-GPIGLVTMLGAPRAFGAPRIVIVD-VDDYRLSV-A---KEIGAD-NIVKVST-NLQDIAEEVEKIQKA  251 (365)
Q Consensus       180 ~~g~~vlI~G~-g~~G~~ai~~l~~~~g~~~vi~v~-~~~~~~~~-~---~~~g~~-~~~~~~~-~~~~~~~~i~~~~~~  251 (365)
                      ..+.++||+|+ +++|.++++.++ ..|++ |+.++ ++.++.+. .   +..+.. ..+..+- +.++..+.++++.+.
T Consensus        23 ~~~k~vlITGas~gIG~~~a~~l~-~~G~~-v~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~Dl~~~~~v~~~~~~~~~~  100 (269)
T 3gk3_A           23 QAKRVAFVTGGMGGLGAAISRRLH-DAGMA-VAVSHSERNDHVSTWLMHERDAGRDFKAYAVDVADFESCERCAEKVLAD  100 (269)
T ss_dssp             -CCCEEEETTTTSHHHHHHHHHHH-TTTCE-EEEEECSCHHHHHHHHHHHHTTTCCCEEEECCTTCHHHHHHHHHHHHHH
T ss_pred             hcCCEEEEECCCchHHHHHHHHHH-HCCCE-EEEEcCCchHHHHHHHHHHHhcCCceEEEEecCCCHHHHHHHHHHHHHH
Confidence            35678999987 999999999555 55995 55555 55444332 2   222322 2222222 223333344444332


Q ss_pred             hCCCceEEEeCCC
Q 017868          252 MGTGIDVSFDCAG  264 (365)
Q Consensus       252 ~~~~~d~vid~~g  264 (365)
                      . +++|++|.++|
T Consensus       101 ~-g~id~li~nAg  112 (269)
T 3gk3_A          101 F-GKVDVLINNAG  112 (269)
T ss_dssp             H-SCCSEEEECCC
T ss_pred             c-CCCCEEEECCC
Confidence            2 47999999887

>2ixa_A Alpha-N-acetylgalactosaminidase; NAD, A-ECO conversion, hydrolase; HET: NAD; 2.3A {Flavobacterium meningosepticum} PDB: 2ixb_A*

Probab=94.74  E-value=0.16  Score=47.18  Aligned_cols=136  Identities=16%  Similarity=0.202  Sum_probs=79.2

Q ss_pred             CEEEEEcCCHHHHHHHHHHHHHCCCCeEEEEeCChhHHHHH-H---HcCCCEEEeCCCCcccHHHHHHHHHHHhCCCceE
Q 017868          183 TNVLIMGAGPIGLVTMLGAPRAFGAPRIVIVDVDDYRLSVA-K---EIGADNIVKVSTNLQDIAEEVEKIQKAMGTGIDV  258 (365)
Q Consensus       183 ~~vlI~G~g~~G~~ai~~l~~~~g~~~vi~v~~~~~~~~~~-~---~~g~~~~~~~~~~~~~~~~~i~~~~~~~~~~~d~  258 (365)
                      -+|.|+|+|.+|...+..+.+.-+++.+.++++++++.+.+ +   ++|......+.....++.+.+.      ...+|+
T Consensus        21 ~rvgiIG~G~~g~~h~~~l~~~~~~~lvav~d~~~~~~~~~a~~~~~~g~~~~~~~~~~~~~~~~ll~------~~~vD~   94 (444)
T 2ixa_A           21 VRIAFIAVGLRGQTHVENMARRDDVEIVAFADPDPYMVGRAQEILKKNGKKPAKVFGNGNDDYKNMLK------DKNIDA   94 (444)
T ss_dssp             EEEEEECCSHHHHHHHHHHHTCTTEEEEEEECSCHHHHHHHHHHHHHTTCCCCEEECSSTTTHHHHTT------CTTCCE
T ss_pred             ceEEEEecCHHHHHHHHHHHhCCCcEEEEEEeCCHHHHHHHHHHHHhcCCCCCceeccCCCCHHHHhc------CCCCCE
Confidence            47889999999988777454444676566677777776543 3   3464211122211124433321      347999


Q ss_pred             EEeCCCCHHHHHHHHHhcccCCEEEEEccCCCCccccch---H----hhhcCcEEEe--ecccCCcHHHHHHHHHcCCC
Q 017868          259 SFDCAGLNKTMSTALGATCAGGKVCLVGMGHHEMTVPLT---P----AAVREVDVVG--VFRYKNTWPLCLELLRSGKI  328 (365)
Q Consensus       259 vid~~g~~~~~~~~~~~l~~~G~~~~~g~~~~~~~~~~~---~----~~~~~~~i~~--~~~~~~~~~~~~~~l~~g~~  328 (365)
                      |+.|+....+.+.+..+|..+ +-+++.   .+......   .    .-.++..+.-  ...+...+..+.+++++|.+
T Consensus        95 V~i~tp~~~h~~~~~~al~aG-khV~~E---KP~a~~~~ea~~l~~~a~~~g~~~~v~~~~r~~p~~~~~~~~i~~G~i  169 (444)
T 2ixa_A           95 VFVSSPWEWHHEHGVAAMKAG-KIVGME---VSGAITLEECWDYVKVSEQTGVPLMALENVCYRRDVMAILNMVRKGMF  169 (444)
T ss_dssp             EEECCCGGGHHHHHHHHHHTT-CEEEEC---CCCCSSHHHHHHHHHHHHHHCCCEEECCGGGGCHHHHHHHHHHHTTTT
T ss_pred             EEEcCCcHHHHHHHHHHHHCC-CeEEEe---CCCcCCHHHHHHHHHHHHHhCCeEEEEeccccCHHHHHHHHHHHcCCC
Confidence            999999877888888888855 445553   11111111   1    1122333222  22335567888899999887

>1id1_A Putative potassium channel protein; RCK domain, E.coli potassium channel, BK channel, rossmann fold, membrane protein; 2.40A {Escherichia coli} SCOP: c.2.1.9

Probab=94.73  E-value=0.21  Score=38.55  Aligned_cols=95  Identities=12%  Similarity=0.157  Sum_probs=55.6

Q ss_pred             CCEEEEEcCCHHHHHHHHHHHHHCCCCeEEEEeCC-hhHHHHHH-Hc--CCCEEEeCCCCcccHHHHHHHHHHHhCCCce
Q 017868          182 ETNVLIMGAGPIGLVTMLGAPRAFGAPRIVIVDVD-DYRLSVAK-EI--GADNIVKVSTNLQDIAEEVEKIQKAMGTGID  257 (365)
Q Consensus       182 g~~vlI~G~g~~G~~ai~~l~~~~g~~~vi~v~~~-~~~~~~~~-~~--g~~~~~~~~~~~~~~~~~i~~~~~~~~~~~d  257 (365)
                      .++++|.|+|.+|...++ .+...|. .|++++++ +++.+.++ .+  |.. ++.-+.  .+. +.+++   ..-.++|
T Consensus         3 ~~~vlI~G~G~vG~~la~-~L~~~g~-~V~vid~~~~~~~~~~~~~~~~~~~-~i~gd~--~~~-~~l~~---a~i~~ad   73 (153)
T 1id1_A            3 KDHFIVCGHSILAINTIL-QLNQRGQ-NVTVISNLPEDDIKQLEQRLGDNAD-VIPGDS--NDS-SVLKK---AGIDRCR   73 (153)
T ss_dssp             CSCEEEECCSHHHHHHHH-HHHHTTC-CEEEEECCCHHHHHHHHHHHCTTCE-EEESCT--TSH-HHHHH---HTTTTCS
T ss_pred             CCcEEEECCCHHHHHHHH-HHHHCCC-CEEEEECCChHHHHHHHHhhcCCCe-EEEcCC--CCH-HHHHH---cChhhCC
Confidence            467999999999999999 5566788 47777776 45554443 22  433 333222  221 22322   2235899


Q ss_pred             EEEeCCCCHHHHH---HHHHhcccCCEEEEE
Q 017868          258 VSFDCAGLNKTMS---TALGATCAGGKVCLV  285 (365)
Q Consensus       258 ~vid~~g~~~~~~---~~~~~l~~~G~~~~~  285 (365)
                      .|+-+++....-.   ...+.+.+..+++..
T Consensus        74 ~vi~~~~~d~~n~~~~~~a~~~~~~~~ii~~  104 (153)
T 1id1_A           74 AILALSDNDADNAFVVLSAKDMSSDVKTVLA  104 (153)
T ss_dssp             EEEECSSCHHHHHHHHHHHHHHTSSSCEEEE
T ss_pred             EEEEecCChHHHHHHHHHHHHHCCCCEEEEE
Confidence            9999998653211   233344455565543

>1nt2_A Fibrillarin-like PRE-rRNA processing protein; adeMet, binding motif, RNA binding protein; HET: SAM; 2.90A {Archaeoglobus fulgidus} SCOP: c.66.1.3

Probab=94.69  E-value=0.36  Score=39.62  Aligned_cols=100  Identities=12%  Similarity=0.087  Sum_probs=60.3

Q ss_pred             cCCCCCCEEEEEcCCHHHHHHHHHHHHHCCCCeEEEEeCChhHH----HHHHHcCCCEEEeCCCCcccHHHHHHHHHHHh
Q 017868          177 ANIGPETNVLIMGAGPIGLVTMLGAPRAFGAPRIVIVDVDDYRL----SVAKEIGADNIVKVSTNLQDIAEEVEKIQKAM  252 (365)
Q Consensus       177 ~~~~~g~~vlI~G~g~~G~~ai~~l~~~~g~~~vi~v~~~~~~~----~~~~~~g~~~~~~~~~~~~~~~~~i~~~~~~~  252 (365)
                      ..+++|++||=.|+|. |..+.. +++..+...|++++.+++..    +.+++..-...+.  .+..+...    .. ..
T Consensus        53 ~~~~~g~~VLDlGcGt-G~~~~~-la~~~~~~~V~gvD~s~~~l~~~~~~a~~~~~v~~~~--~d~~~~~~----~~-~~  123 (210)
T 1nt2_A           53 LKLRGDERVLYLGAAS-GTTVSH-LADIVDEGIIYAVEYSAKPFEKLLELVRERNNIIPLL--FDASKPWK----YS-GI  123 (210)
T ss_dssp             CCCCSSCEEEEETCTT-SHHHHH-HHHHTTTSEEEEECCCHHHHHHHHHHHHHCSSEEEEC--SCTTCGGG----TT-TT
T ss_pred             cCCCCCCEEEEECCcC-CHHHHH-HHHHcCCCEEEEEECCHHHHHHHHHHHhcCCCeEEEE--cCCCCchh----hc-cc
Confidence            4578999999998864 666666 66665544799999998643    3344432111121  11111100    00 01


Q ss_pred             CCCceEEEeCCCCHH----HHHHHHHhcccCCEEEEE
Q 017868          253 GTGIDVSFDCAGLNK----TMSTALGATCAGGKVCLV  285 (365)
Q Consensus       253 ~~~~d~vid~~g~~~----~~~~~~~~l~~~G~~~~~  285 (365)
                      ...+|+|+.....+.    .+..+.+.|+++|+++..
T Consensus       124 ~~~fD~V~~~~~~~~~~~~~l~~~~r~LkpgG~l~i~  160 (210)
T 1nt2_A          124 VEKVDLIYQDIAQKNQIEILKANAEFFLKEKGEVVIM  160 (210)
T ss_dssp             CCCEEEEEECCCSTTHHHHHHHHHHHHEEEEEEEEEE
T ss_pred             ccceeEEEEeccChhHHHHHHHHHHHHhCCCCEEEEE
Confidence            357999987654321    256788899999999876

>1dhr_A Dihydropteridine reductase; oxidoreductase(acting on NADH or NADPH); HET: NAD; 2.30A {Rattus norvegicus} SCOP: c.2.1.2 PDB: 1dir_A* 1hdr_A*

Probab=94.67  E-value=0.068  Score=45.00  Aligned_cols=78  Identities=23%  Similarity=0.326  Sum_probs=45.7

Q ss_pred             CCCCEEEEEcC-CHHHHHHHHHHHHHCCCCeEEEEeCChhHHHHHHHcCCCEEEeCCC-CcccHHHHHHHHHHHhC-CCc
Q 017868          180 GPETNVLIMGA-GPIGLVTMLGAPRAFGAPRIVIVDVDDYRLSVAKEIGADNIVKVST-NLQDIAEEVEKIQKAMG-TGI  256 (365)
Q Consensus       180 ~~g~~vlI~G~-g~~G~~ai~~l~~~~g~~~vi~v~~~~~~~~~~~~~g~~~~~~~~~-~~~~~~~~i~~~~~~~~-~~~  256 (365)
                      ..+.++||+|+ |++|.++++.++ ..|+ .|+.+++++++.+     +....+..+- +.+++.+.++++.+..+ +++
T Consensus         5 ~~~k~vlVTGas~gIG~~ia~~l~-~~G~-~V~~~~r~~~~~~-----~~~~~~~~D~~~~~~v~~~~~~~~~~~~~g~i   77 (241)
T 1dhr_A            5 GEARRVLVYGGRGALGSRCVQAFR-ARNW-WVASIDVVENEEA-----SASVIVKMTDSFTEQADQVTAEVGKLLGDQKV   77 (241)
T ss_dssp             -CCCEEEEETTTSHHHHHHHHHHH-TTTC-EEEEEESSCCTTS-----SEEEECCCCSCHHHHHHHHHHHHHHHHTTCCE
T ss_pred             CCCCEEEEECCCcHHHHHHHHHHH-hCCC-EEEEEeCChhhcc-----CCcEEEEcCCCCHHHHHHHHHHHHHHhCCCCC
Confidence            45678999987 999999999554 5598 5777777655421     1111111111 11223333333333222 589


Q ss_pred             eEEEeCCC
Q 017868          257 DVSFDCAG  264 (365)
Q Consensus       257 d~vid~~g  264 (365)
                      |++|.++|
T Consensus        78 D~lv~~Ag   85 (241)
T 1dhr_A           78 DAILCVAG   85 (241)
T ss_dssp             EEEEECCC
T ss_pred             CEEEEccc
Confidence            99999887

>3bus_A REBM, methyltransferase; rebeccamycin synthesis; HET: SAH; 2.65A {Lechevalieria aerocolonigenes}

Probab=94.67  E-value=0.38  Score=40.97  Aligned_cols=100  Identities=14%  Similarity=0.191  Sum_probs=65.9

Q ss_pred             HHhcCCCCCCEEEEEcCCHHHHHHHHHHHHHCCCCeEEEEeCChhHHHHHHHc----CCC---EEEeCCCCcccHHHHHH
Q 017868          174 CRRANIGPETNVLIMGAGPIGLVTMLGAPRAFGAPRIVIVDVDDYRLSVAKEI----GAD---NIVKVSTNLQDIAEEVE  246 (365)
Q Consensus       174 ~~~~~~~~g~~vlI~G~g~~G~~ai~~l~~~~g~~~vi~v~~~~~~~~~~~~~----g~~---~~~~~~~~~~~~~~~i~  246 (365)
                      ++...++++.+||-.|+|. |..+.. +++..+. .+++++.+++..+.+++.    +..   .++..+  ..++.    
T Consensus        54 ~~~~~~~~~~~vLDiGcG~-G~~~~~-l~~~~~~-~v~gvD~s~~~~~~a~~~~~~~~~~~~~~~~~~d--~~~~~----  124 (273)
T 3bus_A           54 IALLDVRSGDRVLDVGCGI-GKPAVR-LATARDV-RVTGISISRPQVNQANARATAAGLANRVTFSYAD--AMDLP----  124 (273)
T ss_dssp             HHHSCCCTTCEEEEESCTT-SHHHHH-HHHHSCC-EEEEEESCHHHHHHHHHHHHHTTCTTTEEEEECC--TTSCC----
T ss_pred             HHhcCCCCCCEEEEeCCCC-CHHHHH-HHHhcCC-EEEEEeCCHHHHHHHHHHHHhcCCCcceEEEECc--cccCC----
Confidence            3567788999999999865 777777 6666676 799999998877665442    432   222211  11110    


Q ss_pred             HHHHHhCCCceEEEeCC-----C-CHHHHHHHHHhcccCCEEEEEc
Q 017868          247 KIQKAMGTGIDVSFDCA-----G-LNKTMSTALGATCAGGKVCLVG  286 (365)
Q Consensus       247 ~~~~~~~~~~d~vid~~-----g-~~~~~~~~~~~l~~~G~~~~~g  286 (365)
                          .....+|+|+..-     . ....+..+.++|+++|.+++..
T Consensus       125 ----~~~~~fD~v~~~~~l~~~~~~~~~l~~~~~~L~pgG~l~i~~  166 (273)
T 3bus_A          125 ----FEDASFDAVWALESLHHMPDRGRALREMARVLRPGGTVAIAD  166 (273)
T ss_dssp             ----SCTTCEEEEEEESCTTTSSCHHHHHHHHHTTEEEEEEEEEEE
T ss_pred             ----CCCCCccEEEEechhhhCCCHHHHHHHHHHHcCCCeEEEEEE
Confidence                0135799998522     1 2346678888999999998764

>2jl1_A Triphenylmethane reductase; oxidoreductase, bioremediation; HET: NAP GOL; 1.96A {Citrobacter SP} PDB: 2vrb_A* 2vrc_A 2vrc_D

Probab=94.66  E-value=0.1  Score=44.98  Aligned_cols=94  Identities=14%  Similarity=0.184  Sum_probs=54.5

Q ss_pred             EEEEEcC-CHHHHHHHHHHHHHC--CCCeEEEEeCChhHHHHHHHcCCCEEEeCCCCcccHHHHHHHHHHHhCCCceEEE
Q 017868          184 NVLIMGA-GPIGLVTMLGAPRAF--GAPRIVIVDVDDYRLSVAKEIGADNIVKVSTNLQDIAEEVEKIQKAMGTGIDVSF  260 (365)
Q Consensus       184 ~vlI~G~-g~~G~~ai~~l~~~~--g~~~vi~v~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~i~~~~~~~~~~~d~vi  260 (365)
                      +|||+|+ |.+|..+++.++ ..  |. .|+++++++++.+.+...++.. +..+-  .+. +.+.+.    -.++|+||
T Consensus         2 ~ilVtGatG~iG~~l~~~L~-~~~~g~-~V~~~~r~~~~~~~l~~~~~~~-~~~D~--~d~-~~l~~~----~~~~d~vi   71 (287)
T 2jl1_A            2 SIAVTGATGQLGGLVIQHLL-KKVPAS-QIIAIVRNVEKASTLADQGVEV-RHGDY--NQP-ESLQKA----FAGVSKLL   71 (287)
T ss_dssp             CEEETTTTSHHHHHHHHHHT-TTSCGG-GEEEEESCTTTTHHHHHTTCEE-EECCT--TCH-HHHHHH----TTTCSEEE
T ss_pred             eEEEEcCCchHHHHHHHHHH-HhCCCC-eEEEEEcCHHHHhHHhhcCCeE-EEecc--CCH-HHHHHH----HhcCCEEE
Confidence            6899987 999999998444 44  77 5677777766655444445432 22222  122 233333    24699999


Q ss_pred             eCCCCH-------HHHHHHHHhcccC--CEEEEEcc
Q 017868          261 DCAGLN-------KTMSTALGATCAG--GKVCLVGM  287 (365)
Q Consensus       261 d~~g~~-------~~~~~~~~~l~~~--G~~~~~g~  287 (365)
                      .+++..       ......++.+...  .+++.++.
T Consensus        72 ~~a~~~~~~~~n~~~~~~l~~a~~~~~~~~~v~~Ss  107 (287)
T 2jl1_A           72 FISGPHYDNTLLIVQHANVVKAARDAGVKHIAYTGY  107 (287)
T ss_dssp             ECCCCCSCHHHHHHHHHHHHHHHHHTTCSEEEEEEE
T ss_pred             EcCCCCcCchHHHHHHHHHHHHHHHcCCCEEEEECC
Confidence            988731       1222344444333  47777764

>3un1_A Probable oxidoreductase; structural genomics, PSI-biology, NEW YORK structural genomi research consortium, nysgrc; 2.45A {Sinorhizobium meliloti}

Probab=94.66  E-value=0.051  Score=46.43  Aligned_cols=77  Identities=18%  Similarity=0.076  Sum_probs=46.2

Q ss_pred             CCCEEEEEcC-CHHHHHHHHHHHHHCCCCeEEEEeCChhHHHHHHHcCCCEEEeCCC-CcccHHHHHHHHHHHhCCCceE
Q 017868          181 PETNVLIMGA-GPIGLVTMLGAPRAFGAPRIVIVDVDDYRLSVAKEIGADNIVKVST-NLQDIAEEVEKIQKAMGTGIDV  258 (365)
Q Consensus       181 ~g~~vlI~G~-g~~G~~ai~~l~~~~g~~~vi~v~~~~~~~~~~~~~g~~~~~~~~~-~~~~~~~~i~~~~~~~~~~~d~  258 (365)
                      .+.++||+|+ +++|.+++..++ ..|+ .|+.++++.++.+.   ..+ ..+..+- +.++..+.+++..+.. +++|+
T Consensus        27 ~~k~vlVTGas~gIG~aia~~l~-~~G~-~V~~~~r~~~~~~~---~~~-~~~~~Dv~d~~~v~~~~~~~~~~~-g~iD~   99 (260)
T 3un1_A           27 QQKVVVITGASQGIGAGLVRAYR-DRNY-RVVATSRSIKPSAD---PDI-HTVAGDISKPETADRIVREGIERF-GRIDS   99 (260)
T ss_dssp             TCCEEEESSCSSHHHHHHHHHHH-HTTC-EEEEEESSCCCCSS---TTE-EEEESCTTSHHHHHHHHHHHHHHH-SCCCE
T ss_pred             CCCEEEEeCCCCHHHHHHHHHHH-HCCC-EEEEEeCChhhccc---Cce-EEEEccCCCHHHHHHHHHHHHHHC-CCCCE
Confidence            4678999987 999999999554 5599 57777666543211   111 1222222 2233333444443332 48999


Q ss_pred             EEeCCC
Q 017868          259 SFDCAG  264 (365)
Q Consensus       259 vid~~g  264 (365)
                      +|.++|
T Consensus       100 lv~nAg  105 (260)
T 3un1_A          100 LVNNAG  105 (260)
T ss_dssp             EEECCC
T ss_pred             EEECCC
Confidence            999887

>1wwk_A Phosphoglycerate dehydrogenase; riken structural genomics/proteomics initiative, RSGI, structural genomics, oxidoreductase; HET: NAD; 1.90A {Pyrococcus horikoshii}

Probab=94.65  E-value=0.18  Score=44.26  Aligned_cols=88  Identities=19%  Similarity=0.178  Sum_probs=62.9

Q ss_pred             CCCEEEEEcCCHHHHHHHHHHHHHCCCCeEEEEeCChhHHHHHHHcCCCEEEeCCCCcccHHHHHHHHHHHhCCCceEEE
Q 017868          181 PETNVLIMGAGPIGLVTMLGAPRAFGAPRIVIVDVDDYRLSVAKEIGADNIVKVSTNLQDIAEEVEKIQKAMGTGIDVSF  260 (365)
Q Consensus       181 ~g~~vlI~G~g~~G~~ai~~l~~~~g~~~vi~v~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~i~~~~~~~~~~~d~vi  260 (365)
                      .|.+|.|.|.|.+|..+++ .++.+|+ .|++.+++.++ +.+.++|+...        ++.+.+        ...|+|+
T Consensus       141 ~g~~vgIiG~G~IG~~~A~-~l~~~G~-~V~~~d~~~~~-~~~~~~g~~~~--------~l~ell--------~~aDvV~  201 (307)
T 1wwk_A          141 EGKTIGIIGFGRIGYQVAK-IANALGM-NILLYDPYPNE-ERAKEVNGKFV--------DLETLL--------KESDVVT  201 (307)
T ss_dssp             TTCEEEEECCSHHHHHHHH-HHHHTTC-EEEEECSSCCH-HHHHHTTCEEC--------CHHHHH--------HHCSEEE
T ss_pred             CCceEEEEccCHHHHHHHH-HHHHCCC-EEEEECCCCCh-hhHhhcCcccc--------CHHHHH--------hhCCEEE
Confidence            5789999999999999999 7788998 68888887766 55677776321        222222        2579999


Q ss_pred             eCCCCHH----HH-HHHHHhcccCCEEEEEcc
Q 017868          261 DCAGLNK----TM-STALGATCAGGKVCLVGM  287 (365)
Q Consensus       261 d~~g~~~----~~-~~~~~~l~~~G~~~~~g~  287 (365)
                      -++....    .+ ...+..+++++.++.++.
T Consensus       202 l~~p~~~~t~~li~~~~l~~mk~ga~lin~ar  233 (307)
T 1wwk_A          202 IHVPLVESTYHLINEERLKLMKKTAILINTSR  233 (307)
T ss_dssp             ECCCCSTTTTTCBCHHHHHHSCTTCEEEECSC
T ss_pred             EecCCChHHhhhcCHHHHhcCCCCeEEEECCC
Confidence            8776321    11 246678899988888765

>3ggo_A Prephenate dehydrogenase; TYRA, HPP, NADH, alpha-beta, oxidoreductase; HET: NAI ENO; 2.15A {Aquifex aeolicus} PDB: 3ggg_D* 3ggp_A*

Probab=94.64  E-value=0.41  Score=42.04  Aligned_cols=91  Identities=21%  Similarity=0.183  Sum_probs=58.0

Q ss_pred             CEEEEEcCCHHHHHHHHHHHHHCCCC-eEEEEeCChhHHHHHHHcCCCEEEeCCCCcccHHHHHHHHHHHhCCCceEEEe
Q 017868          183 TNVLIMGAGPIGLVTMLGAPRAFGAP-RIVIVDVDDYRLSVAKEIGADNIVKVSTNLQDIAEEVEKIQKAMGTGIDVSFD  261 (365)
Q Consensus       183 ~~vlI~G~g~~G~~ai~~l~~~~g~~-~vi~v~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~i~~~~~~~~~~~d~vid  261 (365)
                      .+|.|+|+|.+|...+. .++..|.. .|++.++++++.+.+.++|+.....  .+..++  .        -...|+||-
T Consensus        34 ~kI~IIG~G~mG~slA~-~l~~~G~~~~V~~~dr~~~~~~~a~~~G~~~~~~--~~~~~~--~--------~~~aDvVil  100 (314)
T 3ggo_A           34 QNVLIVGVGFMGGSFAK-SLRRSGFKGKIYGYDINPESISKAVDLGIIDEGT--TSIAKV--E--------DFSPDFVML  100 (314)
T ss_dssp             SEEEEESCSHHHHHHHH-HHHHTTCCSEEEEECSCHHHHHHHHHTTSCSEEE--SCTTGG--G--------GGCCSEEEE
T ss_pred             CEEEEEeeCHHHHHHHH-HHHhCCCCCEEEEEECCHHHHHHHHHCCCcchhc--CCHHHH--h--------hccCCEEEE
Confidence            68999999999999998 55666863 6888899999998888888632111  111110  0        135788888


Q ss_pred             CCCCHH---HHHHHHHhcccCCEEEEEc
Q 017868          262 CAGLNK---TMSTALGATCAGGKVCLVG  286 (365)
Q Consensus       262 ~~g~~~---~~~~~~~~l~~~G~~~~~g  286 (365)
                      |+....   .+......++++..++.++
T Consensus       101 avp~~~~~~vl~~l~~~l~~~~iv~d~~  128 (314)
T 3ggo_A          101 SSPVRTFREIAKKLSYILSEDATVTDQG  128 (314)
T ss_dssp             CSCGGGHHHHHHHHHHHSCTTCEEEECC
T ss_pred             eCCHHHHHHHHHHHhhccCCCcEEEECC
Confidence            776432   2233444555565555554

>2pt6_A Spermidine synthase; transferase, structural genomics consor SGC,dcadoMet complex; HET: S4M 1PG; 2.00A {Plasmodium falciparum} PDB: 2pss_A* 2pt9_A*

Probab=94.61  E-value=0.23  Score=43.91  Aligned_cols=98  Identities=17%  Similarity=0.158  Sum_probs=63.4

Q ss_pred             CCCCEEEEEcCCHHHHHHHHHHHHHCCCCeEEEEeCChhHHHHHHHc-CC-------CEEEeCCCCcccHHHHHHHHHHH
Q 017868          180 GPETNVLIMGAGPIGLVTMLGAPRAFGAPRIVIVDVDDYRLSVAKEI-GA-------DNIVKVSTNLQDIAEEVEKIQKA  251 (365)
Q Consensus       180 ~~g~~vlI~G~g~~G~~ai~~l~~~~g~~~vi~v~~~~~~~~~~~~~-g~-------~~~~~~~~~~~~~~~~i~~~~~~  251 (365)
                      .++.+||..|+|. |..+.. +++..+...+++++.+++..+.+++. ..       ..+....   .|..+.+..    
T Consensus       115 ~~~~~VLdiG~G~-G~~~~~-l~~~~~~~~v~~vDis~~~l~~ar~~~~~~~~~~~~~~v~~~~---~D~~~~l~~----  185 (321)
T 2pt6_A          115 KEPKNVLVVGGGD-GGIIRE-LCKYKSVENIDICEIDETVIEVSKIYFKNISCGYEDKRVNVFI---EDASKFLEN----  185 (321)
T ss_dssp             SSCCEEEEEECTT-CHHHHH-HTTCTTCCEEEEEESCHHHHHHHHHHCTTTSGGGGSTTEEEEE---SCHHHHHHH----
T ss_pred             CCCCEEEEEcCCc-cHHHHH-HHHcCCCCEEEEEECCHHHHHHHHHHHHhhccccCCCcEEEEE---ccHHHHHhh----
Confidence            4568999998754 556666 66665556899999999988887663 21       1111111   233332221    


Q ss_pred             hCCCceEEEeCCC----------CHHHHHHHHHhcccCCEEEEEc
Q 017868          252 MGTGIDVSFDCAG----------LNKTMSTALGATCAGGKVCLVG  286 (365)
Q Consensus       252 ~~~~~d~vid~~g----------~~~~~~~~~~~l~~~G~~~~~g  286 (365)
                      ....+|+|+....          ....+..+.++|+++|.++...
T Consensus       186 ~~~~fDvIi~d~~~p~~~~~~l~~~~~l~~~~~~LkpgG~lv~~~  230 (321)
T 2pt6_A          186 VTNTYDVIIVDSSDPIGPAETLFNQNFYEKIYNALKPNGYCVAQC  230 (321)
T ss_dssp             CCSCEEEEEEECCCSSSGGGGGSSHHHHHHHHHHEEEEEEEEEEE
T ss_pred             cCCCceEEEECCcCCCCcchhhhHHHHHHHHHHhcCCCcEEEEEc
Confidence            2568999984321          1456778899999999998864

>1ooe_A Dihydropteridine reductase; structural genomics, PSI, protein structure initiative, southeast collaboratory for structural genomics; HET: MES; 1.65A {Caenorhabditis elegans} SCOP: c.2.1.2

Probab=94.61  E-value=0.053  Score=45.49  Aligned_cols=76  Identities=17%  Similarity=0.277  Sum_probs=44.5

Q ss_pred             CCEEEEEcC-CHHHHHHHHHHHHHCCCCeEEEEeCChhHHHHHHHcCCCEEEeCCCC-cccHHHHHHHHHHHhC-CCceE
Q 017868          182 ETNVLIMGA-GPIGLVTMLGAPRAFGAPRIVIVDVDDYRLSVAKEIGADNIVKVSTN-LQDIAEEVEKIQKAMG-TGIDV  258 (365)
Q Consensus       182 g~~vlI~G~-g~~G~~ai~~l~~~~g~~~vi~v~~~~~~~~~~~~~g~~~~~~~~~~-~~~~~~~i~~~~~~~~-~~~d~  258 (365)
                      +.++||+|+ |++|.++++.++ ..|+ .|+.+++++++.+     +....+..+-. .++....+++..+..+ +++|+
T Consensus         3 ~k~vlITGas~gIG~~~a~~l~-~~G~-~V~~~~r~~~~~~-----~~~~~~~~D~~~~~~~~~~~~~~~~~~~~g~id~   75 (236)
T 1ooe_A            3 SGKVIVYGGKGALGSAILEFFK-KNGY-TVLNIDLSANDQA-----DSNILVDGNKNWTEQEQSILEQTASSLQGSQVDG   75 (236)
T ss_dssp             CEEEEEETTTSHHHHHHHHHHH-HTTE-EEEEEESSCCTTS-----SEEEECCTTSCHHHHHHHHHHHHHHHHTTCCEEE
T ss_pred             CCEEEEECCCcHHHHHHHHHHH-HCCC-EEEEEecCccccc-----cccEEEeCCCCCHHHHHHHHHHHHHHhCCCCCCE
Confidence            568999987 999999999554 5698 5777777665421     11111111111 1222223333333222 58999


Q ss_pred             EEeCCC
Q 017868          259 SFDCAG  264 (365)
Q Consensus       259 vid~~g  264 (365)
                      +|.++|
T Consensus        76 lv~~Ag   81 (236)
T 1ooe_A           76 VFCVAG   81 (236)
T ss_dssp             EEECCC
T ss_pred             EEECCc
Confidence            999988

>3bwc_A Spermidine synthase; SAM, SGPP, structura genomics, PSI, protein structure initiative, structural GEN pathogenic protozoa consortium; HET: MSE SAM; 2.30A {Trypanosoma cruzi} PDB: 3bwb_A*

Probab=94.58  E-value=0.29  Score=42.83  Aligned_cols=100  Identities=20%  Similarity=0.097  Sum_probs=63.4

Q ss_pred             CCCCCEEEEEcCCHHHHHHHHHHHHHCCCCeEEEEeCChhHHHHHHHcC--------CCEEEeCCCCcccHHHHHHHHHH
Q 017868          179 IGPETNVLIMGAGPIGLVTMLGAPRAFGAPRIVIVDVDDYRLSVAKEIG--------ADNIVKVSTNLQDIAEEVEKIQK  250 (365)
Q Consensus       179 ~~~g~~vlI~G~g~~G~~ai~~l~~~~g~~~vi~v~~~~~~~~~~~~~g--------~~~~~~~~~~~~~~~~~i~~~~~  250 (365)
                      ..++.+||+.|+|. |..+.. +++..+...+++++.+++-.+.+++.-        ...+....   .|..+.+...  
T Consensus        93 ~~~~~~VLdiG~G~-G~~~~~-l~~~~~~~~v~~vDid~~~i~~a~~~~~~~~~~~~~~~v~~~~---~D~~~~~~~~--  165 (304)
T 3bwc_A           93 HPKPERVLIIGGGD-GGVLRE-VLRHGTVEHCDLVDIDGEVMEQSKQHFPQISRSLADPRATVRV---GDGLAFVRQT--  165 (304)
T ss_dssp             SSSCCEEEEEECTT-SHHHHH-HHTCTTCCEEEEEESCHHHHHHHHHHCHHHHGGGGCTTEEEEE---SCHHHHHHSS--
T ss_pred             CCCCCeEEEEcCCC-CHHHHH-HHhCCCCCEEEEEECCHHHHHHHHHHhHHhhcccCCCcEEEEE---CcHHHHHHhc--
Confidence            45678999998764 666666 655555568999999998888776532        11111111   2332222110  


Q ss_pred             HhCCCceEEEeCCCC----------HHHHHHHHHhcccCCEEEEEc
Q 017868          251 AMGTGIDVSFDCAGL----------NKTMSTALGATCAGGKVCLVG  286 (365)
Q Consensus       251 ~~~~~~d~vid~~g~----------~~~~~~~~~~l~~~G~~~~~g  286 (365)
                       ....+|+|+.....          ...+..+.++|+++|.++...
T Consensus       166 -~~~~fDvIi~d~~~~~~~~~~l~~~~~l~~~~~~LkpgG~lv~~~  210 (304)
T 3bwc_A          166 -PDNTYDVVIIDTTDPAGPASKLFGEAFYKDVLRILKPDGICCNQG  210 (304)
T ss_dssp             -CTTCEEEEEEECC---------CCHHHHHHHHHHEEEEEEEEEEE
T ss_pred             -cCCceeEEEECCCCccccchhhhHHHHHHHHHHhcCCCcEEEEec
Confidence             24679999863321          346778889999999998874

>2z5l_A Tylkr1, tylactone synthase starter module and modules 1 & 2; short-chain dehydrogenase/reductase, rossman fold; 1.95A {Streptomyces fradiae}

Probab=94.57  E-value=0.25  Score=46.62  Aligned_cols=80  Identities=23%  Similarity=0.295  Sum_probs=50.4

Q ss_pred             CCCCCEEEEEcC-CHHHHHHHHHHHHHCCCCeEEEEeCChhH----H---HHHHHcCCCEE-EeCCCCcccHHHHHHHHH
Q 017868          179 IGPETNVLIMGA-GPIGLVTMLGAPRAFGAPRIVIVDVDDYR----L---SVAKEIGADNI-VKVSTNLQDIAEEVEKIQ  249 (365)
Q Consensus       179 ~~~g~~vlI~G~-g~~G~~ai~~l~~~~g~~~vi~v~~~~~~----~---~~~~~~g~~~~-~~~~~~~~~~~~~i~~~~  249 (365)
                      ++++.++||+|+ |++|..++..+ ...|+++++.+.++...    .   +.++..|.... +..+-  .+. +.+++..
T Consensus       256 ~~~~~~vLITGgtGgIG~~lA~~L-a~~G~~~vvl~~R~~~~~~~~~~l~~~l~~~g~~v~~~~~Dv--td~-~~v~~~~  331 (511)
T 2z5l_A          256 WQPSGTVLITGGMGAIGRRLARRL-AAEGAERLVLTSRRGPEAPGAAELAEELRGHGCEVVHAACDV--AER-DALAALV  331 (511)
T ss_dssp             CCCCSEEEEETTTSHHHHHHHHHH-HHTTCSEEEEEESSGGGSTTHHHHHHHHHTTTCEEEEEECCS--SCH-HHHHHHH
T ss_pred             cCCCCEEEEECCCCHHHHHHHHHH-HhCCCcEEEEEecCCcccHHHHHHHHHHHhcCCEEEEEEeCC--CCH-HHHHHHH
Confidence            467899999987 99999999955 45698777777776531    2   22344454322 22222  222 3344443


Q ss_pred             HHhCCCceEEEeCCC
Q 017868          250 KAMGTGIDVSFDCAG  264 (365)
Q Consensus       250 ~~~~~~~d~vid~~g  264 (365)
                      +.  .++|+||.+.|
T Consensus       332 ~~--~~ld~VVh~AG  344 (511)
T 2z5l_A          332 TA--YPPNAVFHTAG  344 (511)
T ss_dssp             HH--SCCSEEEECCC
T ss_pred             hc--CCCcEEEECCc
Confidence            32  57999999987

>3m33_A Uncharacterized protein; structural genomics, PSI-2, protein structure initiative, MCSG, midwest center for structural genomics; 2.19A {Deinococcus radiodurans}

Probab=94.54  E-value=0.045  Score=45.59  Aligned_cols=95  Identities=18%  Similarity=0.210  Sum_probs=65.2

Q ss_pred             CCCCCEEEEEcCCHHHHHHHHHHHHHCCCCeEEEEeCChhHHHHHHHcCC-CEEEeCCCCcccHHHHHHHHHHHh-CCCc
Q 017868          179 IGPETNVLIMGAGPIGLVTMLGAPRAFGAPRIVIVDVDDYRLSVAKEIGA-DNIVKVSTNLQDIAEEVEKIQKAM-GTGI  256 (365)
Q Consensus       179 ~~~g~~vlI~G~g~~G~~ai~~l~~~~g~~~vi~v~~~~~~~~~~~~~g~-~~~~~~~~~~~~~~~~i~~~~~~~-~~~~  256 (365)
                      +.++.+||-.|+|. |..+.. +++. +. .+++++.++...+.+++... ..++..+-. ..+.        .. ...+
T Consensus        46 ~~~~~~vLDiGcG~-G~~~~~-l~~~-~~-~v~~vD~s~~~~~~a~~~~~~~~~~~~d~~-~~~~--------~~~~~~f  112 (226)
T 3m33_A           46 LTPQTRVLEAGCGH-GPDAAR-FGPQ-AA-RWAAYDFSPELLKLARANAPHADVYEWNGK-GELP--------AGLGAPF  112 (226)
T ss_dssp             CCTTCEEEEESCTT-SHHHHH-HGGG-SS-EEEEEESCHHHHHHHHHHCTTSEEEECCSC-SSCC--------TTCCCCE
T ss_pred             CCCCCeEEEeCCCC-CHHHHH-HHHc-CC-EEEEEECCHHHHHHHHHhCCCceEEEcchh-hccC--------CcCCCCE
Confidence            36789999998864 666667 6655 76 79999999998888876532 222221110 1110        01 3579


Q ss_pred             eEEEeCCCCHHHHHHHHHhcccCCEEEEEc
Q 017868          257 DVSFDCAGLNKTMSTALGATCAGGKVCLVG  286 (365)
Q Consensus       257 d~vid~~g~~~~~~~~~~~l~~~G~~~~~g  286 (365)
                      |+|+........+..+.+.|+++|.++..+
T Consensus       113 D~v~~~~~~~~~l~~~~~~LkpgG~l~~~~  142 (226)
T 3m33_A          113 GLIVSRRGPTSVILRLPELAAPDAHFLYVG  142 (226)
T ss_dssp             EEEEEESCCSGGGGGHHHHEEEEEEEEEEE
T ss_pred             EEEEeCCCHHHHHHHHHHHcCCCcEEEEeC
Confidence            999987665667788999999999998443

>2nwq_A Probable short-chain dehydrogenase; oxidoreductase; 2.30A {Pseudomonas aeruginosa}

Probab=94.54  E-value=0.09  Score=45.26  Aligned_cols=78  Identities=19%  Similarity=0.189  Sum_probs=46.8

Q ss_pred             CEEEEEcC-CHHHHHHHHHHHHHCCCCeEEEEeCChhHHHH-HHHcCC---CEEEeCCCCcccHHHHHHHHHHH---hCC
Q 017868          183 TNVLIMGA-GPIGLVTMLGAPRAFGAPRIVIVDVDDYRLSV-AKEIGA---DNIVKVSTNLQDIAEEVEKIQKA---MGT  254 (365)
Q Consensus       183 ~~vlI~G~-g~~G~~ai~~l~~~~g~~~vi~v~~~~~~~~~-~~~~g~---~~~~~~~~~~~~~~~~i~~~~~~---~~~  254 (365)
                      .++||+|+ +++|.++++.++ ..|+ .|+.+++++++.+. .+++..   ...+..+-.  +. +.++++.+.   .-+
T Consensus        22 k~vlVTGas~gIG~aia~~La-~~G~-~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~Dv~--d~-~~v~~~~~~~~~~~g   96 (272)
T 2nwq_A           22 STLFITGATSGFGEACARRFA-EAGW-SLVLTGRREERLQALAGELSAKTRVLPLTLDVR--DR-AAMSAAVDNLPEEFA   96 (272)
T ss_dssp             CEEEESSTTTSSHHHHHHHHH-HTTC-EEEEEESCHHHHHHHHHHHTTTSCEEEEECCTT--CH-HHHHHHHHTCCGGGS
T ss_pred             cEEEEeCCCCHHHHHHHHHHH-HCCC-EEEEEECCHHHHHHHHHHhhcCCcEEEEEcCCC--CH-HHHHHHHHHHHHHhC
Confidence            68999987 999999999555 5699 57777788776553 344432   122222222  21 223333221   124


Q ss_pred             CceEEEeCCCC
Q 017868          255 GIDVSFDCAGL  265 (365)
Q Consensus       255 ~~d~vid~~g~  265 (365)
                      ++|++|.++|.
T Consensus        97 ~iD~lvnnAG~  107 (272)
T 2nwq_A           97 TLRGLINNAGL  107 (272)
T ss_dssp             SCCEEEECCCC
T ss_pred             CCCEEEECCCC
Confidence            78999998873

>1g8a_A Fibrillarin-like PRE-rRNA processing protein; rRNA binding, RNA binding, structural genomics, BSGC structure funded by NIH; 1.40A {Pyrococcus horikoshii} SCOP: c.66.1.3 PDB: 2nnw_B 3nmu_F* 3nvk_I* 3nvm_B 1pry_A

Probab=94.53  E-value=0.16  Score=42.06  Aligned_cols=100  Identities=17%  Similarity=0.126  Sum_probs=60.7

Q ss_pred             cCCCCCCEEEEEcCCHHHHHHHHHHHHHCC-CCeEEEEeCChhHHHHHHH----cCCCEEEeCCCCcccHHHHHHHHHHH
Q 017868          177 ANIGPETNVLIMGAGPIGLVTMLGAPRAFG-APRIVIVDVDDYRLSVAKE----IGADNIVKVSTNLQDIAEEVEKIQKA  251 (365)
Q Consensus       177 ~~~~~g~~vlI~G~g~~G~~ai~~l~~~~g-~~~vi~v~~~~~~~~~~~~----~g~~~~~~~~~~~~~~~~~i~~~~~~  251 (365)
                      ..++++++||-.|+|. |..+.. +++..| ...+++++.+++..+.+++    ..-...+.  .+..+.. ...    .
T Consensus        69 ~~~~~~~~vLDlG~G~-G~~~~~-la~~~~~~~~v~~vD~s~~~~~~~~~~~~~~~~v~~~~--~d~~~~~-~~~----~  139 (227)
T 1g8a_A           69 FPIKPGKSVLYLGIAS-GTTASH-VSDIVGWEGKIFGIEFSPRVLRELVPIVEERRNIVPIL--GDATKPE-EYR----A  139 (227)
T ss_dssp             CCCCTTCEEEEETTTS-TTHHHH-HHHHHCTTSEEEEEESCHHHHHHHHHHHSSCTTEEEEE--CCTTCGG-GGT----T
T ss_pred             cCCCCCCEEEEEeccC-CHHHHH-HHHHhCCCeEEEEEECCHHHHHHHHHHHhccCCCEEEE--ccCCCcc-hhh----c
Confidence            4578899999998865 666666 666654 2479999999865544322    21111222  1111110 000    0


Q ss_pred             hCCCceEEEeCCCCH----HHHHHHHHhcccCCEEEEE
Q 017868          252 MGTGIDVSFDCAGLN----KTMSTALGATCAGGKVCLV  285 (365)
Q Consensus       252 ~~~~~d~vid~~g~~----~~~~~~~~~l~~~G~~~~~  285 (365)
                      ....+|+|+.....+    ..+..+.+.|+++|.++..
T Consensus       140 ~~~~~D~v~~~~~~~~~~~~~l~~~~~~LkpgG~l~~~  177 (227)
T 1g8a_A          140 LVPKVDVIFEDVAQPTQAKILIDNAEVYLKRGGYGMIA  177 (227)
T ss_dssp             TCCCEEEEEECCCSTTHHHHHHHHHHHHEEEEEEEEEE
T ss_pred             ccCCceEEEECCCCHhHHHHHHHHHHHhcCCCCEEEEE
Confidence            135799998755433    2367788999999998876

>2pxx_A Uncharacterized protein MGC2408; structural genomics consortium, SGC, methyltransferase, LOC84291, transferase; HET: SAH; 1.30A {Homo sapiens}

Probab=94.52  E-value=0.17  Score=41.28  Aligned_cols=96  Identities=16%  Similarity=0.266  Sum_probs=63.0

Q ss_pred             CCCCCEEEEEcCCHHHHHHHHHHHHHCCCCeEEEEeCChhHHHHHHHcCC----CEEEeCCCCcccHHHHHHHHHHHhCC
Q 017868          179 IGPETNVLIMGAGPIGLVTMLGAPRAFGAPRIVIVDVDDYRLSVAKEIGA----DNIVKVSTNLQDIAEEVEKIQKAMGT  254 (365)
Q Consensus       179 ~~~g~~vlI~G~g~~G~~ai~~l~~~~g~~~vi~v~~~~~~~~~~~~~g~----~~~~~~~~~~~~~~~~i~~~~~~~~~  254 (365)
                      +.++.+||-.|+|. |..+.. +++. |...+++++.++...+.+++...    ...+..+.  .++        .....
T Consensus        40 ~~~~~~vLdiGcG~-G~~~~~-l~~~-~~~~v~~~D~s~~~~~~a~~~~~~~~~i~~~~~d~--~~~--------~~~~~  106 (215)
T 2pxx_A           40 LRPEDRILVLGCGN-SALSYE-LFLG-GFPNVTSVDYSSVVVAAMQACYAHVPQLRWETMDV--RKL--------DFPSA  106 (215)
T ss_dssp             CCTTCCEEEETCTT-CSHHHH-HHHT-TCCCEEEEESCHHHHHHHHHHTTTCTTCEEEECCT--TSC--------CSCSS
T ss_pred             cCCCCeEEEECCCC-cHHHHH-HHHc-CCCcEEEEeCCHHHHHHHHHhcccCCCcEEEEcch--hcC--------CCCCC
Confidence            57889999999865 666666 6555 65579999999998888766432    12222111  111        01135


Q ss_pred             CceEEEeCCC---------------------CHHHHHHHHHhcccCCEEEEEcc
Q 017868          255 GIDVSFDCAG---------------------LNKTMSTALGATCAGGKVCLVGM  287 (365)
Q Consensus       255 ~~d~vid~~g---------------------~~~~~~~~~~~l~~~G~~~~~g~  287 (365)
                      .+|+|+....                     ....+..+.++|+++|.+++...
T Consensus       107 ~fD~v~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~LkpgG~li~~~~  160 (215)
T 2pxx_A          107 SFDVVLEKGTLDALLAGERDPWTVSSEGVHTVDQVLSEVSRVLVPGGRFISMTS  160 (215)
T ss_dssp             CEEEEEEESHHHHHTTTCSCTTSCCHHHHHHHHHHHHHHHHHEEEEEEEEEEES
T ss_pred             cccEEEECcchhhhccccccccccccchhHHHHHHHHHHHHhCcCCCEEEEEeC
Confidence            7999996311                     13456678889999999998754

>1xj5_A Spermidine synthase 1; structural genomics, protein structure initiative, CESG, AT1G23820, putrescine aminopropyl transferase, SPDS1; 2.70A {Arabidopsis thaliana} SCOP: c.66.1.17 PDB: 2q41_A

Probab=94.49  E-value=0.19  Score=44.60  Aligned_cols=100  Identities=20%  Similarity=0.214  Sum_probs=64.0

Q ss_pred             CCCCCCEEEEEcCCHHHHHHHHHHHHHCCCCeEEEEeCChhHHHHHHHcC------C--CEEEeCCCCcccHHHHHHHHH
Q 017868          178 NIGPETNVLIMGAGPIGLVTMLGAPRAFGAPRIVIVDVDDYRLSVAKEIG------A--DNIVKVSTNLQDIAEEVEKIQ  249 (365)
Q Consensus       178 ~~~~g~~vlI~G~g~~G~~ai~~l~~~~g~~~vi~v~~~~~~~~~~~~~g------~--~~~~~~~~~~~~~~~~i~~~~  249 (365)
                      ....+.+||.+|+|. |..+.. +++..+...+++++.+++..+.+++.-      .  ..+....   .|..+.+... 
T Consensus       117 ~~~~~~~VLdIG~G~-G~~a~~-la~~~~~~~V~~VDis~~~l~~Ar~~~~~~~~gl~~~rv~~~~---~D~~~~l~~~-  190 (334)
T 1xj5_A          117 SIPNPKKVLVIGGGD-GGVLRE-VARHASIEQIDMCEIDKMVVDVSKQFFPDVAIGYEDPRVNLVI---GDGVAFLKNA-  190 (334)
T ss_dssp             TSSCCCEEEEETCSS-SHHHHH-HTTCTTCCEEEEEESCHHHHHHHHHHCHHHHGGGGSTTEEEEE---SCHHHHHHTS-
T ss_pred             hCCCCCEEEEECCCc-cHHHHH-HHHcCCCCEEEEEECCHHHHHHHHHHHHhhccccCCCcEEEEE---CCHHHHHHhc-
Confidence            345678999998754 666666 666655568999999998887776531      1  1111111   2333322211 


Q ss_pred             HHhCCCceEEEeCCC----------CHHHHHHHHHhcccCCEEEEE
Q 017868          250 KAMGTGIDVSFDCAG----------LNKTMSTALGATCAGGKVCLV  285 (365)
Q Consensus       250 ~~~~~~~d~vid~~g----------~~~~~~~~~~~l~~~G~~~~~  285 (365)
                        ....+|+|+....          ....+..+.++|+++|.++..
T Consensus       191 --~~~~fDlIi~d~~~p~~~~~~l~~~~~l~~~~~~LkpgG~lv~~  234 (334)
T 1xj5_A          191 --AEGSYDAVIVDSSDPIGPAKELFEKPFFQSVARALRPGGVVCTQ  234 (334)
T ss_dssp             --CTTCEEEEEECCCCTTSGGGGGGSHHHHHHHHHHEEEEEEEEEE
T ss_pred             --cCCCccEEEECCCCccCcchhhhHHHHHHHHHHhcCCCcEEEEe
Confidence              1357999985322          245677889999999999886

>1hdo_A Biliverdin IX beta reductase; foetal metabolism, HAEM degradation, flavin reductase, diaphorase, green HAEM binding protein; HET: NAP; 1.15A {Homo sapiens} SCOP: c.2.1.2 PDB: 1he2_A* 1he3_A* 1he4_A* 1he5_A*

Probab=94.49  E-value=0.062  Score=43.67  Aligned_cols=73  Identities=26%  Similarity=0.332  Sum_probs=44.3

Q ss_pred             CEEEEEcC-CHHHHHHHHHHHHHCCCCeEEEEeCChhHHHHHHHcCCCEEEeCCCCcccHHHHHHHHHHHhCCCceEEEe
Q 017868          183 TNVLIMGA-GPIGLVTMLGAPRAFGAPRIVIVDVDDYRLSVAKEIGADNIVKVSTNLQDIAEEVEKIQKAMGTGIDVSFD  261 (365)
Q Consensus       183 ~~vlI~G~-g~~G~~ai~~l~~~~g~~~vi~v~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~i~~~~~~~~~~~d~vid  261 (365)
                      .+|||+|+ |.+|..+++.+ ...|. .|+++++++++.+....-+. ..+..+-  .+. +.+.+..    .++|+||.
T Consensus         4 ~~ilVtGatG~iG~~l~~~l-~~~g~-~V~~~~r~~~~~~~~~~~~~-~~~~~D~--~~~-~~~~~~~----~~~d~vi~   73 (206)
T 1hdo_A            4 KKIAIFGATGQTGLTTLAQA-VQAGY-EVTVLVRDSSRLPSEGPRPA-HVVVGDV--LQA-ADVDKTV----AGQDAVIV   73 (206)
T ss_dssp             CEEEEESTTSHHHHHHHHHH-HHTTC-EEEEEESCGGGSCSSSCCCS-EEEESCT--TSH-HHHHHHH----TTCSEEEE
T ss_pred             CEEEEEcCCcHHHHHHHHHH-HHCCC-eEEEEEeChhhcccccCCce-EEEEecC--CCH-HHHHHHH----cCCCEEEE
Confidence            68999997 99999999944 45587 67777777765422111122 2222222  222 2333332    36899999


Q ss_pred             CCCC
Q 017868          262 CAGL  265 (365)
Q Consensus       262 ~~g~  265 (365)
                      ++|.
T Consensus        74 ~a~~   77 (206)
T 1hdo_A           74 LLGT   77 (206)
T ss_dssp             CCCC
T ss_pred             CccC
Confidence            9884

>2o57_A Putative sarcosine dimethylglycine methyltransferase; structural genomics, protein structure initiative, PSI-2; 1.95A {Galdieria sulphuraria} SCOP: c.66.1.18

Probab=94.48  E-value=0.45  Score=41.15  Aligned_cols=96  Identities=16%  Similarity=0.212  Sum_probs=63.9

Q ss_pred             CCCCCCEEEEEcCCHHHHHHHHHHHHHCCCCeEEEEeCChhHHHHHHH----cCCC---EEEeCCCCcccHHHHHHHHHH
Q 017868          178 NIGPETNVLIMGAGPIGLVTMLGAPRAFGAPRIVIVDVDDYRLSVAKE----IGAD---NIVKVSTNLQDIAEEVEKIQK  250 (365)
Q Consensus       178 ~~~~g~~vlI~G~g~~G~~ai~~l~~~~g~~~vi~v~~~~~~~~~~~~----~g~~---~~~~~~~~~~~~~~~i~~~~~  250 (365)
                      .+.++.+||-.|+|. |..+.. +++..|. .+++++.++...+.+++    .|..   .++.  .+..++.        
T Consensus        79 ~~~~~~~vLDiGcG~-G~~~~~-l~~~~~~-~v~gvD~s~~~~~~a~~~~~~~~~~~~~~~~~--~d~~~~~--------  145 (297)
T 2o57_A           79 VLQRQAKGLDLGAGY-GGAARF-LVRKFGV-SIDCLNIAPVQNKRNEEYNNQAGLADNITVKY--GSFLEIP--------  145 (297)
T ss_dssp             CCCTTCEEEEETCTT-SHHHHH-HHHHHCC-EEEEEESCHHHHHHHHHHHHHHTCTTTEEEEE--CCTTSCS--------
T ss_pred             CCCCCCEEEEeCCCC-CHHHHH-HHHHhCC-EEEEEeCCHHHHHHHHHHHHhcCCCcceEEEE--cCcccCC--------
Confidence            778999999999863 777777 6666677 79999999887666544    3331   2222  1111110        


Q ss_pred             HhCCCceEEEeCCCC------HHHHHHHHHhcccCCEEEEEc
Q 017868          251 AMGTGIDVSFDCAGL------NKTMSTALGATCAGGKVCLVG  286 (365)
Q Consensus       251 ~~~~~~d~vid~~g~------~~~~~~~~~~l~~~G~~~~~g  286 (365)
                      .....+|+|+....-      ...+..+.++|+++|.+++..
T Consensus       146 ~~~~~fD~v~~~~~l~~~~~~~~~l~~~~~~LkpgG~l~~~~  187 (297)
T 2o57_A          146 CEDNSYDFIWSQDAFLHSPDKLKVFQECARVLKPRGVMAITD  187 (297)
T ss_dssp             SCTTCEEEEEEESCGGGCSCHHHHHHHHHHHEEEEEEEEEEE
T ss_pred             CCCCCEeEEEecchhhhcCCHHHHHHHHHHHcCCCeEEEEEE
Confidence            013579999874321      346778899999999998764

>3g5t_A Trans-aconitate 3-methyltransferase; structural genomics, protein structure initiative, PSI, center for eukaryotic structural genomics; HET: MSE SAH T8N; 1.12A {Saccharomyces cerevisiae}

Probab=94.47  E-value=0.26  Score=42.82  Aligned_cols=104  Identities=17%  Similarity=0.209  Sum_probs=64.1

Q ss_pred             CCCCCEEEEEcCCHHHHHHHHHHHHHC-CCCeEEEEeCChhHHHHHHHc-----C-CCEEEeCCCCcccHHHHHHHHHHH
Q 017868          179 IGPETNVLIMGAGPIGLVTMLGAPRAF-GAPRIVIVDVDDYRLSVAKEI-----G-ADNIVKVSTNLQDIAEEVEKIQKA  251 (365)
Q Consensus       179 ~~~g~~vlI~G~g~~G~~ai~~l~~~~-g~~~vi~v~~~~~~~~~~~~~-----g-~~~~~~~~~~~~~~~~~i~~~~~~  251 (365)
                      ..++.+||=.|+|. |..+.. +++.. ....+++++.++...+.+++.     + ...+.....+..++.  .......
T Consensus        34 ~~~~~~vLDiGcG~-G~~~~~-la~~~~~~~~v~gvD~s~~~~~~a~~~~~~~~~~~~~v~~~~~d~~~~~--~~~~~~~  109 (299)
T 3g5t_A           34 DGERKLLVDVGCGP-GTATLQ-MAQELKPFEQIIGSDLSATMIKTAEVIKEGSPDTYKNVSFKISSSDDFK--FLGADSV  109 (299)
T ss_dssp             CSCCSEEEEETCTT-THHHHH-HHHHSSCCSEEEEEESCHHHHHHHHHHHHHCC-CCTTEEEEECCTTCCG--GGCTTTT
T ss_pred             cCCCCEEEEECCCC-CHHHHH-HHHhCCCCCEEEEEeCCHHHHHHHHHHHHhccCCCCceEEEEcCHHhCC--ccccccc
Confidence            36889999999874 777888 77654 555899999999887776553     1 111111111212211  0000000


Q ss_pred             hCCCceEEEeCCC-----CHHHHHHHHHhcccCCEEEEEc
Q 017868          252 MGTGIDVSFDCAG-----LNKTMSTALGATCAGGKVCLVG  286 (365)
Q Consensus       252 ~~~~~d~vid~~g-----~~~~~~~~~~~l~~~G~~~~~g  286 (365)
                      ..+.+|+|+....     ....+..+.++|+++|.++++.
T Consensus       110 ~~~~fD~V~~~~~l~~~~~~~~l~~~~~~LkpgG~l~i~~  149 (299)
T 3g5t_A          110 DKQKIDMITAVECAHWFDFEKFQRSAYANLRKDGTIAIWG  149 (299)
T ss_dssp             TSSCEEEEEEESCGGGSCHHHHHHHHHHHEEEEEEEEEEE
T ss_pred             cCCCeeEEeHhhHHHHhCHHHHHHHHHHhcCCCcEEEEEe
Confidence            0168999987433     2457778999999999998754

>2gas_A Isoflavone reductase; NADPH-dependent reductase, oxidoreductase; 1.60A {Medicago sativa}

Probab=94.44  E-value=0.067  Score=46.68  Aligned_cols=74  Identities=22%  Similarity=0.321  Sum_probs=44.8

Q ss_pred             CCEEEEEcC-CHHHHHHHHHHHHHCCCCeEEEEeCCh-------hHHHHHH---HcCCCEEEeCCCCcccHHHHHHHHHH
Q 017868          182 ETNVLIMGA-GPIGLVTMLGAPRAFGAPRIVIVDVDD-------YRLSVAK---EIGADNIVKVSTNLQDIAEEVEKIQK  250 (365)
Q Consensus       182 g~~vlI~G~-g~~G~~ai~~l~~~~g~~~vi~v~~~~-------~~~~~~~---~~g~~~~~~~~~~~~~~~~~i~~~~~  250 (365)
                      +.+|||+|+ |.+|..++..|++ .|.+ |+++++++       ++.+.++   ..++.. +..+-  .+. +.+.+.. 
T Consensus         2 ~~~vlVtGatG~iG~~l~~~L~~-~g~~-V~~~~R~~~~~~~~~~~~~~~~~l~~~~v~~-v~~D~--~d~-~~l~~~~-   74 (307)
T 2gas_A            2 ENKILILGPTGAIGRHIVWASIK-AGNP-TYALVRKTITAANPETKEELIDNYQSLGVIL-LEGDI--NDH-ETLVKAI-   74 (307)
T ss_dssp             CCCEEEESTTSTTHHHHHHHHHH-HTCC-EEEEECCSCCSSCHHHHHHHHHHHHHTTCEE-EECCT--TCH-HHHHHHH-
T ss_pred             CcEEEEECCCchHHHHHHHHHHh-CCCc-EEEEECCCcccCChHHHHHHHHHHHhCCCEE-EEeCC--CCH-HHHHHHH-
Confidence            457999997 9999999995554 5875 55665654       4444333   335433 32222  222 2333332 


Q ss_pred             HhCCCceEEEeCCCC
Q 017868          251 AMGTGIDVSFDCAGL  265 (365)
Q Consensus       251 ~~~~~~d~vid~~g~  265 (365)
                         .++|+||.+++.
T Consensus        75 ---~~~d~vi~~a~~   86 (307)
T 2gas_A           75 ---KQVDIVICAAGR   86 (307)
T ss_dssp             ---TTCSEEEECSSS
T ss_pred             ---hCCCEEEECCcc
Confidence               369999998874

>3doj_A AT3G25530, dehydrogenase-like protein; gamma-hydroxybutyrate dehydrogenase, 4-hydroxybutyrate dehydrogenase; 2.10A {Arabidopsis thaliana}

Probab=94.44  E-value=0.32  Score=42.62  Aligned_cols=88  Identities=14%  Similarity=0.107  Sum_probs=57.0

Q ss_pred             CCEEEEEcCCHHHHHHHHHHHHHCCCCeEEEEeCChhHHHHHHHcCCCEEEeCCCCcccHHHHHHHHHHHhCCCceEEEe
Q 017868          182 ETNVLIMGAGPIGLVTMLGAPRAFGAPRIVIVDVDDYRLSVAKEIGADNIVKVSTNLQDIAEEVEKIQKAMGTGIDVSFD  261 (365)
Q Consensus       182 g~~vlI~G~g~~G~~ai~~l~~~~g~~~vi~v~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~i~~~~~~~~~~~d~vid  261 (365)
                      -.+|.|+|+|.+|..++. .+...|. .|.+.++++++.+.+.+.|+...       .+..+.+        ...|+||-
T Consensus        21 m~~I~iIG~G~mG~~~A~-~l~~~G~-~V~~~dr~~~~~~~l~~~g~~~~-------~~~~~~~--------~~aDvvi~   83 (310)
T 3doj_A           21 MMEVGFLGLGIMGKAMSM-NLLKNGF-KVTVWNRTLSKCDELVEHGASVC-------ESPAEVI--------KKCKYTIA   83 (310)
T ss_dssp             SCEEEEECCSHHHHHHHH-HHHHTTC-EEEEECSSGGGGHHHHHTTCEEC-------SSHHHHH--------HHCSEEEE
T ss_pred             CCEEEEECccHHHHHHHH-HHHHCCC-eEEEEeCCHHHHHHHHHCCCeEc-------CCHHHHH--------HhCCEEEE
Confidence            367999999999999998 4456688 68888999998888877775321       1222222        23688888


Q ss_pred             CCCCHHHHHHHH-------HhcccCCEEEEEc
Q 017868          262 CAGLNKTMSTAL-------GATCAGGKVCLVG  286 (365)
Q Consensus       262 ~~g~~~~~~~~~-------~~l~~~G~~~~~g  286 (365)
                      |+..+......+       ..+.++..++..+
T Consensus        84 ~vp~~~~~~~v~~~~~~l~~~l~~g~~vv~~s  115 (310)
T 3doj_A           84 MLSDPCAALSVVFDKGGVLEQICEGKGYIDMS  115 (310)
T ss_dssp             CCSSHHHHHHHHHSTTCGGGGCCTTCEEEECS
T ss_pred             EcCCHHHHHHHHhCchhhhhccCCCCEEEECC
Confidence            876654444433       2344444554443

>3cbg_A O-methyltransferase; cyanobacterium; HET: SAH FER 4FE; 2.00A {Synechocystis SP}

Probab=94.44  E-value=0.17  Score=42.28  Aligned_cols=102  Identities=18%  Similarity=0.188  Sum_probs=64.1

Q ss_pred             CCCCCEEEEEcCCHHHHHHHHHHHHHCC-CCeEEEEeCChhHHHHHHH----cCCCE-EEeCCCCcccHHHHHHHHHHHh
Q 017868          179 IGPETNVLIMGAGPIGLVTMLGAPRAFG-APRIVIVDVDDYRLSVAKE----IGADN-IVKVSTNLQDIAEEVEKIQKAM  252 (365)
Q Consensus       179 ~~~g~~vlI~G~g~~G~~ai~~l~~~~g-~~~vi~v~~~~~~~~~~~~----~g~~~-~~~~~~~~~~~~~~i~~~~~~~  252 (365)
                      ..++.+||-.|+| .|..++. +++..+ ...+++++.+++..+.+++    .|... +....   .+..+.+..+.. .
T Consensus        70 ~~~~~~vLdiG~G-~G~~~~~-la~~~~~~~~v~~iD~~~~~~~~a~~~~~~~g~~~~i~~~~---~d~~~~l~~l~~-~  143 (232)
T 3cbg_A           70 LTGAKQVLEIGVF-RGYSALA-MALQLPPDGQIIACDQDPNATAIAKKYWQKAGVAEKISLRL---GPALATLEQLTQ-G  143 (232)
T ss_dssp             HHTCCEEEEECCT-TSHHHHH-HHTTSCTTCEEEEEESCHHHHHHHHHHHHHHTCGGGEEEEE---SCHHHHHHHHHT-S
T ss_pred             hcCCCEEEEecCC-CCHHHHH-HHHhCCCCCEEEEEECCHHHHHHHHHHHHHcCCCCcEEEEE---cCHHHHHHHHHh-c
Confidence            3567799999986 5777777 766654 2379999999988776654    35432 21111   233333333211 1


Q ss_pred             C--CCceEEEeCCCC---HHHHHHHHHhcccCCEEEEEc
Q 017868          253 G--TGIDVSFDCAGL---NKTMSTALGATCAGGKVCLVG  286 (365)
Q Consensus       253 ~--~~~d~vid~~g~---~~~~~~~~~~l~~~G~~~~~g  286 (365)
                      +  ..+|+|+-....   ...+..+.+.|+++|.++.-.
T Consensus       144 ~~~~~fD~V~~d~~~~~~~~~l~~~~~~LkpgG~lv~~~  182 (232)
T 3cbg_A          144 KPLPEFDLIFIDADKRNYPRYYEIGLNLLRRGGLMVIDN  182 (232)
T ss_dssp             SSCCCEEEEEECSCGGGHHHHHHHHHHTEEEEEEEEEEC
T ss_pred             CCCCCcCEEEECCCHHHHHHHHHHHHHHcCCCeEEEEeC
Confidence            2  679999843322   345778889999999998753

>1ff9_A Saccharopine reductase; lysine biosynthesis, alpha-aminoadipate pathway, dehydrogenase, oxidoreductase; 2.00A {Magnaporthe grisea} SCOP: c.2.1.3 d.81.1.2 PDB: 1e5l_A* 1e5q_A

Probab=94.43  E-value=0.29  Score=45.41  Aligned_cols=95  Identities=12%  Similarity=0.064  Sum_probs=56.1

Q ss_pred             CCEEEEEcCCHHHHHHHHHHHHHCCCCeEEEEeCChhHHHHH-HHcCCCEEEeCCCCcccHHHHHHHHHHHhCCCceEEE
Q 017868          182 ETNVLIMGAGPIGLVTMLGAPRAFGAPRIVIVDVDDYRLSVA-KEIGADNIVKVSTNLQDIAEEVEKIQKAMGTGIDVSF  260 (365)
Q Consensus       182 g~~vlI~G~g~~G~~ai~~l~~~~g~~~vi~v~~~~~~~~~~-~~~g~~~~~~~~~~~~~~~~~i~~~~~~~~~~~d~vi  260 (365)
                      +.+|+|+|+|.+|.+++..+ ...|. .|++++++.++.+.+ +.++....+..+-  .++. .+.+..    .++|+|+
T Consensus         3 ~k~VlViGaG~iG~~ia~~L-~~~G~-~V~v~~R~~~~a~~la~~~~~~~~~~~Dv--~d~~-~l~~~l----~~~DvVI   73 (450)
T 1ff9_A            3 TKSVLMLGSGFVTRPTLDVL-TDSGI-KVTVACRTLESAKKLSAGVQHSTPISLDV--NDDA-ALDAEV----AKHDLVI   73 (450)
T ss_dssp             CCEEEEECCSTTHHHHHHHH-HTTTC-EEEEEESSHHHHHHTTTTCTTEEEEECCT--TCHH-HHHHHH----TTSSEEE
T ss_pred             CCEEEEECCCHHHHHHHHHH-HhCcC-EEEEEECCHHHHHHHHHhcCCceEEEeec--CCHH-HHHHHH----cCCcEEE
Confidence            56899999999999999945 45787 577778887776543 3343222222221  2222 233322    3799999


Q ss_pred             eCCCCHHHHHHHHHhcccCCEEEEE
Q 017868          261 DCAGLNKTMSTALGATCAGGKVCLV  285 (365)
Q Consensus       261 d~~g~~~~~~~~~~~l~~~G~~~~~  285 (365)
                      .+++..........++..+-+++..
T Consensus        74 n~a~~~~~~~i~~a~l~~g~~vvd~   98 (450)
T 1ff9_A           74 SLIPYTFHATVIKSAIRQKKHVVTT   98 (450)
T ss_dssp             ECCC--CHHHHHHHHHHHTCEEEES
T ss_pred             ECCccccchHHHHHHHhCCCeEEEe
Confidence            9998532333344556665555544

>3zu3_A Putative reductase YPO4104/Y4119/YP_4011; oxidoreductase, fatty acid biosynthesis II, short-chain dehydrogenase reductase superfamily; HET: NAI; 1.80A {Yersinia pestis} PDB: 3zu4_A* 3zu5_A* 3zu2_A*

Probab=94.43  E-value=0.32  Score=44.04  Aligned_cols=87  Identities=17%  Similarity=0.124  Sum_probs=51.8

Q ss_pred             cCC-CCCCEEEEEcC-CHHHHHHHHHHHHHCCCCeEEEEeCChhH----------------HHHHHHcCCCEE-EeCCC-
Q 017868          177 ANI-GPETNVLIMGA-GPIGLVTMLGAPRAFGAPRIVIVDVDDYR----------------LSVAKEIGADNI-VKVST-  236 (365)
Q Consensus       177 ~~~-~~g~~vlI~G~-g~~G~~ai~~l~~~~g~~~vi~v~~~~~~----------------~~~~~~~g~~~~-~~~~~-  236 (365)
                      ..+ ..++++||+|+ +++|.+++..+++-.|+ .|+.++++.+.                .+.+++.|.... +..+- 
T Consensus        41 ~~~~~~gKvaLVTGas~GIG~AiA~~LA~g~GA-~Vv~~~~~~~~~~~~~~~~gwyn~~~~~~~~~~~G~~a~~i~~Dvt  119 (405)
T 3zu3_A           41 GPIANGPKRVLVIGASTGYGLAARITAAFGCGA-DTLGVFFERPGEEGKPGTSGWYNSAAFHKFAAQKGLYAKSINGDAF  119 (405)
T ss_dssp             CCCTTCCSEEEEESCSSHHHHHHHHHHHHHHCC-EEEEEECCCCCBTTBCCCHHHHHHHHHHHHHHHTTCCEEEEESCTT
T ss_pred             CCcCCCCCEEEEeCcchHHHHHHHHHHHHhcCC-EEEEEeCCchhhhhhcccccchhHHHHHHHHHhcCCceEEEECCCC
Confidence            445 45677788987 89999999856652699 46666543221                224455665432 32222 


Q ss_pred             CcccHHHHHHHHHHHhCCCceEEEeCCCC
Q 017868          237 NLQDIAEEVEKIQKAMGTGIDVSFDCAGL  265 (365)
Q Consensus       237 ~~~~~~~~i~~~~~~~~~~~d~vid~~g~  265 (365)
                      +.++....+.++.+. -+++|++++++|.
T Consensus       120 d~~~v~~~v~~i~~~-~G~IDiLVNNAG~  147 (405)
T 3zu3_A          120 SDEIKQLTIDAIKQD-LGQVDQVIYSLAS  147 (405)
T ss_dssp             SHHHHHHHHHHHHHH-TSCEEEEEECCCC
T ss_pred             CHHHHHHHHHHHHHH-cCCCCEEEEcCcc
Confidence            233444444544443 3689999998875

>2frx_A Hypothetical protein YEBU; rossmann-type S-adenosylmethionine-dependent methyltransfera domain; 2.90A {Escherichia coli}

Probab=94.42  E-value=0.36  Score=45.11  Aligned_cols=98  Identities=17%  Similarity=0.241  Sum_probs=62.1

Q ss_pred             CCCCEEEEEcCCHHHHHHHHHHHHHCC-CCeEEEEeCChhHHHHH----HHcCCCEEEeCCCCcccHHHHHHHHHHHhCC
Q 017868          180 GPETNVLIMGAGPIGLVTMLGAPRAFG-APRIVIVDVDDYRLSVA----KEIGADNIVKVSTNLQDIAEEVEKIQKAMGT  254 (365)
Q Consensus       180 ~~g~~vlI~G~g~~G~~ai~~l~~~~g-~~~vi~v~~~~~~~~~~----~~~g~~~~~~~~~~~~~~~~~i~~~~~~~~~  254 (365)
                      ++|++||=.|+|+ |..+++ ++..++ ...|++++.++++.+.+    +.+|...+.....+..++...       ...
T Consensus       116 ~~g~~VLDl~aGp-G~kt~~-lA~~~~~~g~V~avDis~~~l~~~~~n~~r~g~~nv~~~~~D~~~~~~~-------~~~  186 (479)
T 2frx_A          116 NAPQRVMDVAAAP-GSKTTQ-ISARMNNEGAILANEFSASRVKVLHANISRCGISNVALTHFDGRVFGAA-------VPE  186 (479)
T ss_dssp             CCCSEEEESSCTT-SHHHHH-HHHHTTTCSEEEEECSSHHHHHHHHHHHHHHTCCSEEEECCCSTTHHHH-------STT
T ss_pred             CCCCEEEEeCCCC-CHHHHH-HHHhCCCCCEEEEEECCHHHHHHHHHHHHHcCCCcEEEEeCCHHHhhhh-------ccc
Confidence            3899988877644 555556 555543 34799999999887654    445765443333333333211       146


Q ss_pred             CceEEEe---CCCCH-------------------------HHHHHHHHhcccCCEEEEEc
Q 017868          255 GIDVSFD---CAGLN-------------------------KTMSTALGATCAGGKVCLVG  286 (365)
Q Consensus       255 ~~d~vid---~~g~~-------------------------~~~~~~~~~l~~~G~~~~~g  286 (365)
                      .+|.|+-   |+|..                         ..+..++++|+++|+++...
T Consensus       187 ~fD~Il~D~PcSg~G~~~~~pd~~~~~~~~~~~~l~~~q~~iL~~a~~~LkpGG~LvysT  246 (479)
T 2frx_A          187 MFDAILLDAPCSGEGVVRKDPDALKNWSPESNQEIAATQRELIDSAFHALRPGGTLVYST  246 (479)
T ss_dssp             CEEEEEEECCCCCGGGGGTCTTSSSSCCHHHHHHHHHHHHHHHHHHHHHEEEEEEEEEEE
T ss_pred             cCCEEEECCCcCCcccccCCHHHHhhcCHhHHHHHHHHHHHHHHHHHHhcCCCCEEEEec
Confidence            7999976   55421                         24567888999999998753

>3g89_A Ribosomal RNA small subunit methyltransferase G; 16S rRNA methyltransferase, translation, cytoplasm, rRNA processing; HET: HIC SAM AMP; 1.50A {Thermus thermophilus} PDB: 3g88_A* 3g8a_A* 3g8b_A*

Probab=94.42  E-value=0.15  Score=43.25  Aligned_cols=99  Identities=13%  Similarity=0.091  Sum_probs=60.9

Q ss_pred             CCCCCEEEEEcCCHHHHHHHHHHHHHCCCCeEEEEeCChhHHHHHH----HcCCCEEEeCCCCcccHHHHHHHHHH--Hh
Q 017868          179 IGPETNVLIMGAGPIGLVTMLGAPRAFGAPRIVIVDVDDYRLSVAK----EIGADNIVKVSTNLQDIAEEVEKIQK--AM  252 (365)
Q Consensus       179 ~~~g~~vlI~G~g~~G~~ai~~l~~~~g~~~vi~v~~~~~~~~~~~----~~g~~~~~~~~~~~~~~~~~i~~~~~--~~  252 (365)
                      ..++.+||=.|+|. |..++. ++...+...|++++.+++..+.++    .+|...+..+..   +..    ++..  ..
T Consensus        78 ~~~~~~vLDiG~G~-G~~~i~-la~~~~~~~v~~vD~s~~~~~~a~~~~~~~~l~~v~~~~~---d~~----~~~~~~~~  148 (249)
T 3g89_A           78 WQGPLRVLDLGTGA-GFPGLP-LKIVRPELELVLVDATRKKVAFVERAIEVLGLKGARALWG---RAE----VLAREAGH  148 (249)
T ss_dssp             CCSSCEEEEETCTT-TTTHHH-HHHHCTTCEEEEEESCHHHHHHHHHHHHHHTCSSEEEEEC---CHH----HHTTSTTT
T ss_pred             cCCCCEEEEEcCCC-CHHHHH-HHHHCCCCEEEEEECCHHHHHHHHHHHHHhCCCceEEEEC---cHH----Hhhccccc
Confidence            35788888888643 444455 555544458999999998876654    456543322222   221    1110  01


Q ss_pred             CCCceEEEeCCC-C-HHHHHHHHHhcccCCEEEEEc
Q 017868          253 GTGIDVSFDCAG-L-NKTMSTALGATCAGGKVCLVG  286 (365)
Q Consensus       253 ~~~~d~vid~~g-~-~~~~~~~~~~l~~~G~~~~~g  286 (365)
                      ...||+|+...- . ...+..+.+.|+++|+++.+.
T Consensus       149 ~~~fD~I~s~a~~~~~~ll~~~~~~LkpgG~l~~~~  184 (249)
T 3g89_A          149 REAYARAVARAVAPLCVLSELLLPFLEVGGAAVAMK  184 (249)
T ss_dssp             TTCEEEEEEESSCCHHHHHHHHGGGEEEEEEEEEEE
T ss_pred             CCCceEEEECCcCCHHHHHHHHHHHcCCCeEEEEEe
Confidence            367999987432 2 345667788999999998764

>3qp9_A Type I polyketide synthase pikaii; rossmann fold, ketoreductase, epimerization, oxidoreductase; 1.88A {Streptomyces venezuelae}

Probab=94.41  E-value=0.15  Score=48.31  Aligned_cols=83  Identities=16%  Similarity=0.211  Sum_probs=50.3

Q ss_pred             CCCCCCEEEEEcC-CHHHHHHHHHHHHHCCCCeEEEE-eCCh-------------h----HHHHHHHcCCCEE-EeCCCC
Q 017868          178 NIGPETNVLIMGA-GPIGLVTMLGAPRAFGAPRIVIV-DVDD-------------Y----RLSVAKEIGADNI-VKVSTN  237 (365)
Q Consensus       178 ~~~~g~~vlI~G~-g~~G~~ai~~l~~~~g~~~vi~v-~~~~-------------~----~~~~~~~~g~~~~-~~~~~~  237 (365)
                      .++++.++||+|+ |++|..+++.+++. |+++++.+ .++.             +    ..+.+++.|.... +..+-.
T Consensus       247 ~~~~~~~vLITGgsgGIG~~lA~~La~~-G~~~vvl~~~R~~~~~~~~~~~~~~~~~~~~~~~~l~~~g~~v~~~~~Dvt  325 (525)
T 3qp9_A          247 WWQADGTVLVTGAEEPAAAEAARRLARD-GAGHLLLHTTPSGSEGAEGTSGAAEDSGLAGLVAELADLGATATVVTCDLT  325 (525)
T ss_dssp             SSCTTSEEEESSTTSHHHHHHHHHHHHH-TCCEEEEEECCCC---------------CHHHHHHHHHHTCEEEEEECCTT
T ss_pred             eecCCCEEEEECCCCcHHHHHHHHHHHc-CCCEEEEEeCCCCCCccccccccccCHHHHHHHHHHHhcCCEEEEEECCCC
Confidence            3568899999987 99999999966654 98777777 6662             1    1233444565332 222221


Q ss_pred             cccHHHHHHHHHHH--hCCCceEEEeCCC
Q 017868          238 LQDIAEEVEKIQKA--MGTGIDVSFDCAG  264 (365)
Q Consensus       238 ~~~~~~~i~~~~~~--~~~~~d~vid~~g  264 (365)
                        +. +.++++.+.  ..+++|.||.+.|
T Consensus       326 --d~-~~v~~~~~~i~~~g~id~vVh~AG  351 (525)
T 3qp9_A          326 --DA-EAAARLLAGVSDAHPLSAVLHLPP  351 (525)
T ss_dssp             --SH-HHHHHHHHTSCTTSCEEEEEECCC
T ss_pred             --CH-HHHHHHHHHHHhcCCCcEEEECCc
Confidence              21 223333221  1357999999988

>2p35_A Trans-aconitate 2-methyltransferase; SAM dependent methyltrans agrobacterium tumefaciens, structural genomics, PSI-2; HET: SAH; 1.95A {Agrobacterium tumefaciens str}

Probab=94.40  E-value=0.074  Score=45.08  Aligned_cols=102  Identities=22%  Similarity=0.198  Sum_probs=66.4

Q ss_pred             HHHHhcCCCCCCEEEEEcCCHHHHHHHHHHHHHCCCCeEEEEeCChhHHHHHHHcC-CCEEEeCCCCcccHHHHHHHHHH
Q 017868          172 HACRRANIGPETNVLIMGAGPIGLVTMLGAPRAFGAPRIVIVDVDDYRLSVAKEIG-ADNIVKVSTNLQDIAEEVEKIQK  250 (365)
Q Consensus       172 ~~~~~~~~~~g~~vlI~G~g~~G~~ai~~l~~~~g~~~vi~v~~~~~~~~~~~~~g-~~~~~~~~~~~~~~~~~i~~~~~  250 (365)
                      ..+......++.+||-.|+|. |..+.. +++......+++++.+++..+.+++.. -...+..+  ..++.        
T Consensus        24 ~l~~~~~~~~~~~vLdiG~G~-G~~~~~-l~~~~~~~~v~~~D~s~~~~~~a~~~~~~~~~~~~d--~~~~~--------   91 (259)
T 2p35_A           24 DLLAQVPLERVLNGYDLGCGP-GNSTEL-LTDRYGVNVITGIDSDDDMLEKAADRLPNTNFGKAD--LATWK--------   91 (259)
T ss_dssp             HHHTTCCCSCCSSEEEETCTT-THHHHH-HHHHHCTTSEEEEESCHHHHHHHHHHSTTSEEEECC--TTTCC--------
T ss_pred             HHHHhcCCCCCCEEEEecCcC-CHHHHH-HHHhCCCCEEEEEECCHHHHHHHHHhCCCcEEEECC--hhhcC--------
Confidence            334555678889999998863 666666 555543337999999999888887642 22222211  11111        


Q ss_pred             HhCCCceEEEeCCC------CHHHHHHHHHhcccCCEEEEEc
Q 017868          251 AMGTGIDVSFDCAG------LNKTMSTALGATCAGGKVCLVG  286 (365)
Q Consensus       251 ~~~~~~d~vid~~g------~~~~~~~~~~~l~~~G~~~~~g  286 (365)
                       ....+|+|+....      ....+..+.++|+++|.+++..
T Consensus        92 -~~~~fD~v~~~~~l~~~~~~~~~l~~~~~~L~pgG~l~~~~  132 (259)
T 2p35_A           92 -PAQKADLLYANAVFQWVPDHLAVLSQLMDQLESGGVLAVQM  132 (259)
T ss_dssp             -CSSCEEEEEEESCGGGSTTHHHHHHHHGGGEEEEEEEEEEE
T ss_pred             -ccCCcCEEEEeCchhhCCCHHHHHHHHHHhcCCCeEEEEEe
Confidence             1467999997442      2346667888999999988764

>3l4b_C TRKA K+ channel protien TM1088B; potassium channel, ring-gating complex, structural GEN PSI-2-2, protein structure initiative; HET: AMP; 3.45A {Thermotoga maritima}

Probab=94.40  E-value=0.42  Score=39.39  Aligned_cols=75  Identities=16%  Similarity=0.089  Sum_probs=51.2

Q ss_pred             EEEEEcCCHHHHHHHHHHHHHCCCCeEEEEeCChhHHHHH-HHcCCCEEEeCCCCcccHHHHHHHHHHHhCCCceEEEeC
Q 017868          184 NVLIMGAGPIGLVTMLGAPRAFGAPRIVIVDVDDYRLSVA-KEIGADNIVKVSTNLQDIAEEVEKIQKAMGTGIDVSFDC  262 (365)
Q Consensus       184 ~vlI~G~g~~G~~ai~~l~~~~g~~~vi~v~~~~~~~~~~-~~~g~~~~~~~~~~~~~~~~~i~~~~~~~~~~~d~vid~  262 (365)
                      +|+|.|+|.+|..+++ .+...|. .|++++.++++.+.+ +.++... +.-+..  + .+.+++   ..-..+|+++-+
T Consensus         2 ~iiIiG~G~~G~~la~-~L~~~g~-~v~vid~~~~~~~~l~~~~~~~~-i~gd~~--~-~~~l~~---a~i~~ad~vi~~   72 (218)
T 3l4b_C            2 KVIIIGGETTAYYLAR-SMLSRKY-GVVIINKDRELCEEFAKKLKATI-IHGDGS--H-KEILRD---AEVSKNDVVVIL   72 (218)
T ss_dssp             CEEEECCHHHHHHHHH-HHHHTTC-CEEEEESCHHHHHHHHHHSSSEE-EESCTT--S-HHHHHH---HTCCTTCEEEEC
T ss_pred             EEEEECCCHHHHHHHH-HHHhCCC-eEEEEECCHHHHHHHHHHcCCeE-EEcCCC--C-HHHHHh---cCcccCCEEEEe
Confidence            5889999999999999 5566788 578888999888765 4566543 332222  2 122322   224689999999


Q ss_pred             CCCHH
Q 017868          263 AGLNK  267 (365)
Q Consensus       263 ~g~~~  267 (365)
                      ++...
T Consensus        73 ~~~d~   77 (218)
T 3l4b_C           73 TPRDE   77 (218)
T ss_dssp             CSCHH
T ss_pred             cCCcH
Confidence            98753

>3ctm_A Carbonyl reductase; alcohol dehydrogenase, short-chain dehydrogenases/reductases (SDR), X-RAY crystallography, oxidoreductase; 2.69A {Candida parapsilosis}

Probab=94.39  E-value=0.1  Score=44.93  Aligned_cols=81  Identities=22%  Similarity=0.267  Sum_probs=47.5

Q ss_pred             CCCEEEEEcC-CHHHHHHHHHHHHHCCCCeEEEEeCChhHHH----HHHHcCCCE-EEeCCCC-cccHHHHHHHHHHHhC
Q 017868          181 PETNVLIMGA-GPIGLVTMLGAPRAFGAPRIVIVDVDDYRLS----VAKEIGADN-IVKVSTN-LQDIAEEVEKIQKAMG  253 (365)
Q Consensus       181 ~g~~vlI~G~-g~~G~~ai~~l~~~~g~~~vi~v~~~~~~~~----~~~~~g~~~-~~~~~~~-~~~~~~~i~~~~~~~~  253 (365)
                      .+.++||+|+ |++|.+++..+++. |+ .|+.+++++++.+    .++..+... .+..+-. .+++.+.++++.+.. 
T Consensus        33 ~~k~vlITGasggIG~~la~~L~~~-G~-~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~Dl~~~~~~~~~~~~~~~~~-  109 (279)
T 3ctm_A           33 KGKVASVTGSSGGIGWAVAEAYAQA-GA-DVAIWYNSHPADEKAEHLQKTYGVHSKAYKCNISDPKSVEETISQQEKDF-  109 (279)
T ss_dssp             TTCEEEETTTTSSHHHHHHHHHHHH-TC-EEEEEESSSCCHHHHHHHHHHHCSCEEEEECCTTCHHHHHHHHHHHHHHH-
T ss_pred             CCCEEEEECCCcHHHHHHHHHHHHC-CC-EEEEEeCCHHHHHHHHHHHHhcCCcceEEEeecCCHHHHHHHHHHHHHHh-
Confidence            4678999987 99999999956554 98 5666766654332    223334322 2222222 223333344333322 


Q ss_pred             CCceEEEeCCC
Q 017868          254 TGIDVSFDCAG  264 (365)
Q Consensus       254 ~~~d~vid~~g  264 (365)
                      +++|++|.++|
T Consensus       110 g~id~li~~Ag  120 (279)
T 3ctm_A          110 GTIDVFVANAG  120 (279)
T ss_dssp             SCCSEEEECGG
T ss_pred             CCCCEEEECCc
Confidence            47999999876

>3moi_A Probable dehydrogenase; structural genomics, PSI2, MCSG, protein structure initiativ midwest center for structural genomics; 2.50A {Bordetella bronchiseptica}

Probab=94.39  E-value=0.15  Score=46.26  Aligned_cols=128  Identities=15%  Similarity=0.137  Sum_probs=79.6

Q ss_pred             EEEEEcCC-HHHHHHHHHHHHHCCCCeEEEEeCChhHHH-HHHHcCCCEEEeCCCCcccHHHHHHHHHHHhCCCceEEEe
Q 017868          184 NVLIMGAG-PIGLVTMLGAPRAFGAPRIVIVDVDDYRLS-VAKEIGADNIVKVSTNLQDIAEEVEKIQKAMGTGIDVSFD  261 (365)
Q Consensus       184 ~vlI~G~g-~~G~~ai~~l~~~~g~~~vi~v~~~~~~~~-~~~~~g~~~~~~~~~~~~~~~~~i~~~~~~~~~~~d~vid  261 (365)
                      +|.|+|+| .+|...+..+.+.-+++.+.++++++++.+ +++++|+...       .++.+.+.      ...+|+|+.
T Consensus         4 rigiiG~G~~~~~~~~~~l~~~~~~~l~av~d~~~~~~~~~a~~~g~~~~-------~~~~ell~------~~~vD~V~i   70 (387)
T 3moi_A            4 RFGICGLGFAGSVLMAPAMRHHPDAQIVAACDPNEDVRERFGKEYGIPVF-------ATLAEMMQ------HVQMDAVYI   70 (387)
T ss_dssp             EEEEECCSHHHHTTHHHHHHHCTTEEEEEEECSCHHHHHHHHHHHTCCEE-------SSHHHHHH------HSCCSEEEE
T ss_pred             EEEEEeCCHHHHHHHHHHHHhCCCeEEEEEEeCCHHHHHHHHHHcCCCeE-------CCHHHHHc------CCCCCEEEE
Confidence            68899998 888877774555556766666677777654 5677887631       24444332      247999999


Q ss_pred             CCCCHHHHHHHHHhcccCCEEEEEccCCCCccccchH-------hhhcCcEEE-e-ecccCCcHHHHHHHHHcCCC
Q 017868          262 CAGLNKTMSTALGATCAGGKVCLVGMGHHEMTVPLTP-------AAVREVDVV-G-VFRYKNTWPLCLELLRSGKI  328 (365)
Q Consensus       262 ~~g~~~~~~~~~~~l~~~G~~~~~g~~~~~~~~~~~~-------~~~~~~~i~-~-~~~~~~~~~~~~~~l~~g~~  328 (365)
                      ++....+.+.+..+|..+=+ +++.   .+.......       .-.+++.+. + ...+...++.+.+++++|.+
T Consensus        71 ~tp~~~H~~~~~~al~aGk~-Vl~E---KP~a~~~~e~~~l~~~a~~~g~~~~v~~~~R~~p~~~~~k~~i~~g~i  142 (387)
T 3moi_A           71 ASPHQFHCEHVVQASEQGLH-IIVE---KPLTLSRDEADRMIEAVERAGVHLVVGTSRSHDPVVRTLRAIVQEGSV  142 (387)
T ss_dssp             CSCGGGHHHHHHHHHHTTCE-EEEC---SCCCSCHHHHHHHHHHHHHHTCCEEECCCGGGSHHHHHHHHHHHHCTT
T ss_pred             cCCcHHHHHHHHHHHHCCCc-eeee---CCccCCHHHHHHHHHHHHHhCCeEEEEeccccCHHHHHHHHHHhcCCC
Confidence            99987788888888886544 4442   111111111       112233332 2 12335667888899999887

>2g5c_A Prephenate dehydrogenase; TYRA, oxidoreductase; HET: NAD; 1.90A {Aquifex aeolicus} SCOP: a.100.1.12 c.2.1.6

Probab=94.39  E-value=0.52  Score=40.49  Aligned_cols=89  Identities=22%  Similarity=0.165  Sum_probs=56.8

Q ss_pred             EEEEEcCCHHHHHHHHHHHHHCCCC-eEEEEeCChhHHHHHHHcCCCEEEeCCCCcccHHHHHHHHHHHhCC-CceEEEe
Q 017868          184 NVLIMGAGPIGLVTMLGAPRAFGAP-RIVIVDVDDYRLSVAKEIGADNIVKVSTNLQDIAEEVEKIQKAMGT-GIDVSFD  261 (365)
Q Consensus       184 ~vlI~G~g~~G~~ai~~l~~~~g~~-~vi~v~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~i~~~~~~~~~-~~d~vid  261 (365)
                      +|.|+|+|.+|.+.+. .+...|.. .|++.++++++.+.++++|......  .   +..+.        -. ..|+||.
T Consensus         3 ~I~iIG~G~mG~~~a~-~l~~~g~~~~V~~~d~~~~~~~~~~~~g~~~~~~--~---~~~~~--------~~~~aDvVil   68 (281)
T 2g5c_A            3 NVLIVGVGFMGGSFAK-SLRRSGFKGKIYGYDINPESISKAVDLGIIDEGT--T---SIAKV--------EDFSPDFVML   68 (281)
T ss_dssp             EEEEESCSHHHHHHHH-HHHHTTCCSEEEEECSCHHHHHHHHHTTSCSEEE--S---CGGGG--------GGTCCSEEEE
T ss_pred             EEEEEecCHHHHHHHH-HHHhcCCCcEEEEEeCCHHHHHHHHHCCCccccc--C---CHHHH--------hcCCCCEEEE
Confidence            6889999999999999 55566752 5788899998888888888642111  1   11111        13 6889998


Q ss_pred             CCCCHHHH---HHHHHhcccCCEEEEEc
Q 017868          262 CAGLNKTM---STALGATCAGGKVCLVG  286 (365)
Q Consensus       262 ~~g~~~~~---~~~~~~l~~~G~~~~~g  286 (365)
                      |+......   ......+.++..++.++
T Consensus        69 avp~~~~~~v~~~l~~~l~~~~iv~~~~   96 (281)
T 2g5c_A           69 SSPVRTFREIAKKLSYILSEDATVTDQG   96 (281)
T ss_dssp             CSCHHHHHHHHHHHHHHSCTTCEEEECC
T ss_pred             cCCHHHHHHHHHHHHhhCCCCcEEEECC
Confidence            88754222   22333456666555544

>2j6i_A Formate dehydrogenase; oxidoreductase, D-specific-2- hydroxy acid dehydrogenase, cofactor regenerator, yeast, CBFDH; HET: PG4; 1.55A {Candida boidinii} PDB: 2fss_A

Probab=94.37  E-value=0.078  Score=47.77  Aligned_cols=91  Identities=19%  Similarity=0.250  Sum_probs=61.7

Q ss_pred             CCCEEEEEcCCHHHHHHHHHHHHHCCCCeEEEEeCChhHHHHHHHcCCCEEEeCCCCcccHHHHHHHHHHHhCCCceEEE
Q 017868          181 PETNVLIMGAGPIGLVTMLGAPRAFGAPRIVIVDVDDYRLSVAKEIGADNIVKVSTNLQDIAEEVEKIQKAMGTGIDVSF  260 (365)
Q Consensus       181 ~g~~vlI~G~g~~G~~ai~~l~~~~g~~~vi~v~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~i~~~~~~~~~~~d~vi  260 (365)
                      .|.+|.|+|.|.+|..+++ .++.+|++.|++.+++..+.+.+.++|+..+       .++.+.+        ...|+|+
T Consensus       163 ~g~tvgIIG~G~IG~~vA~-~l~~~G~~~V~~~d~~~~~~~~~~~~g~~~~-------~~l~ell--------~~aDvV~  226 (364)
T 2j6i_A          163 EGKTIATIGAGRIGYRVLE-RLVPFNPKELLYYDYQALPKDAEEKVGARRV-------ENIEELV--------AQADIVT  226 (364)
T ss_dssp             TTCEEEEECCSHHHHHHHH-HHGGGCCSEEEEECSSCCCHHHHHHTTEEEC-------SSHHHHH--------HTCSEEE
T ss_pred             CCCEEEEECcCHHHHHHHH-HHHhCCCcEEEEECCCccchhHHHhcCcEec-------CCHHHHH--------hcCCEEE
Confidence            6789999999999999999 7788899537888877766666677775321       1222221        2578888


Q ss_pred             eCCCCHH----HH-HHHHHhcccCCEEEEEcc
Q 017868          261 DCAGLNK----TM-STALGATCAGGKVCLVGM  287 (365)
Q Consensus       261 d~~g~~~----~~-~~~~~~l~~~G~~~~~g~  287 (365)
                      .++....    .+ ...+..|++++.++.++.
T Consensus       227 l~~P~t~~t~~li~~~~l~~mk~ga~lIn~ar  258 (364)
T 2j6i_A          227 VNAPLHAGTKGLINKELLSKFKKGAWLVNTAR  258 (364)
T ss_dssp             ECCCCSTTTTTCBCHHHHTTSCTTEEEEECSC
T ss_pred             ECCCCChHHHHHhCHHHHhhCCCCCEEEECCC
Confidence            8776421    11 245677787777777653

>1yzh_A TRNA (guanine-N(7)-)-methyltransferase; alpha-beta-alpha sandwich, S-adenosylmeth dependent, structural genomics, PSI; 2.02A {Streptococcus pneumoniae} SCOP: c.66.1.53

Probab=94.37  E-value=0.23  Score=40.71  Aligned_cols=98  Identities=15%  Similarity=0.123  Sum_probs=61.8

Q ss_pred             CCCCEEEEEcCCHHHHHHHHHHHHHCCCCeEEEEeCChhHHHHHHH----cCCCEEEeCCCCcccHHHHHHHHHHHhCCC
Q 017868          180 GPETNVLIMGAGPIGLVTMLGAPRAFGAPRIVIVDVDDYRLSVAKE----IGADNIVKVSTNLQDIAEEVEKIQKAMGTG  255 (365)
Q Consensus       180 ~~g~~vlI~G~g~~G~~ai~~l~~~~g~~~vi~v~~~~~~~~~~~~----~g~~~~~~~~~~~~~~~~~i~~~~~~~~~~  255 (365)
                      .++++||-.|+|. |..++. +++......+++++.+++..+.+++    .+...+.....+..++...+      ....
T Consensus        40 ~~~~~vLDiGcG~-G~~~~~-la~~~p~~~v~gvD~s~~~l~~a~~~~~~~~~~~v~~~~~d~~~~~~~~------~~~~  111 (214)
T 1yzh_A           40 NDNPIHVEVGSGK-GAFVSG-MAKQNPDINYIGIDIQKSVLSYALDKVLEVGVPNIKLLWVDGSDLTDYF------EDGE  111 (214)
T ss_dssp             SCCCEEEEESCTT-SHHHHH-HHHHCTTSEEEEEESCHHHHHHHHHHHHHHCCSSEEEEECCSSCGGGTS------CTTC
T ss_pred             CCCCeEEEEccCc-CHHHHH-HHHHCCCCCEEEEEcCHHHHHHHHHHHHHcCCCCEEEEeCCHHHHHhhc------CCCC
Confidence            4677888888763 666777 6666544489999999887765543    34433222222222221100      1356


Q ss_pred             ceEEEeCCCC--------------HHHHHHHHHhcccCCEEEEE
Q 017868          256 IDVSFDCAGL--------------NKTMSTALGATCAGGKVCLV  285 (365)
Q Consensus       256 ~d~vid~~g~--------------~~~~~~~~~~l~~~G~~~~~  285 (365)
                      +|.|+-....              ...+..+.++|+++|.+++.
T Consensus       112 ~D~i~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~LkpgG~l~~~  155 (214)
T 1yzh_A          112 IDRLYLNFSDPWPKKRHEKRRLTYKTFLDTFKRILPENGEIHFK  155 (214)
T ss_dssp             CSEEEEESCCCCCSGGGGGGSTTSHHHHHHHHHHSCTTCEEEEE
T ss_pred             CCEEEEECCCCccccchhhhccCCHHHHHHHHHHcCCCcEEEEE
Confidence            8998865443              35778889999999998775

>4h3v_A Oxidoreductase domain protein; structural genomics, PSI-biology, midwest center for structu genomics, MCSG, unknown function; HET: MSE; 1.68A {Kribbella flavida}

Probab=94.33  E-value=0.24  Score=44.75  Aligned_cols=129  Identities=19%  Similarity=0.210  Sum_probs=79.7

Q ss_pred             EEEEEcCCHHHHHHHHHHHHHC-------CCCeEEEEeCChhHHH-HHHHcCCCEEEeCCCCcccHHHHHHHHHHHhCCC
Q 017868          184 NVLIMGAGPIGLVTMLGAPRAF-------GAPRIVIVDVDDYRLS-VAKEIGADNIVKVSTNLQDIAEEVEKIQKAMGTG  255 (365)
Q Consensus       184 ~vlI~G~g~~G~~ai~~l~~~~-------g~~~vi~v~~~~~~~~-~~~~~g~~~~~~~~~~~~~~~~~i~~~~~~~~~~  255 (365)
                      +|.|+|+|.+|...+..+.+.-       +++.+.++++++++.+ +++++|...+.      .++.+.+.      ...
T Consensus         8 rvgiIG~G~ig~~h~~~~~~~~~~~~~~~~~~l~av~d~~~~~a~~~a~~~g~~~~~------~d~~~ll~------~~~   75 (390)
T 4h3v_A            8 GIGLIGYAFMGAAHSQAWRSAPRFFDLPLHPDLNVLCGRDAEAVRAAAGKLGWSTTE------TDWRTLLE------RDD   75 (390)
T ss_dssp             EEEEECHHHHHHHHHHHHHHHHHHSCCSSEEEEEEEECSSHHHHHHHHHHHTCSEEE------SCHHHHTT------CTT
T ss_pred             cEEEEcCCHHHHHHHHHHHhCccccccccCceEEEEEcCCHHHHHHHHHHcCCCccc------CCHHHHhc------CCC
Confidence            6788999999987665233221       2345566677777765 56889987654      24433332      457


Q ss_pred             ceEEEeCCCCHHHHHHHHHhcccCCEEEEEccCCCCccccch---Hh---h----hcCcEE-Eee-cccCCcHHHHHHHH
Q 017868          256 IDVSFDCAGLNKTMSTALGATCAGGKVCLVGMGHHEMTVPLT---PA---A----VREVDV-VGV-FRYKNTWPLCLELL  323 (365)
Q Consensus       256 ~d~vid~~g~~~~~~~~~~~l~~~G~~~~~g~~~~~~~~~~~---~~---~----~~~~~i-~~~-~~~~~~~~~~~~~l  323 (365)
                      +|+|+-|+....+.+.+..+|..| +-+++.   .+......   .+   .    .+++.+ .+. ..+...++.+.+++
T Consensus        76 iDaV~I~tP~~~H~~~~~~al~aG-khVl~E---KPla~t~~ea~~l~~~~~~~~~~g~~~~v~~~~R~~p~~~~~k~~i  151 (390)
T 4h3v_A           76 VQLVDVCTPGDSHAEIAIAALEAG-KHVLCE---KPLANTVAEAEAMAAAAAKAAAGGIRSMVGFTYRRVPAIALARKLV  151 (390)
T ss_dssp             CSEEEECSCGGGHHHHHHHHHHTT-CEEEEE---SSSCSSHHHHHHHHHHHHHHHHTTCCEEEECGGGGSHHHHHHHHHH
T ss_pred             CCEEEEeCChHHHHHHHHHHHHcC-CCceee---cCcccchhHHHHHHHHHHHHHhcCCceEEEeeeccCchHHHHHHHH
Confidence            999999998887888888888855 445553   22211111   11   1    123322 232 23466788899999


Q ss_pred             HcCCC
Q 017868          324 RSGKI  328 (365)
Q Consensus       324 ~~g~~  328 (365)
                      ++|.+
T Consensus       152 ~~g~i  156 (390)
T 4h3v_A          152 ADGKI  156 (390)
T ss_dssp             HTTSS
T ss_pred             HcCCC
Confidence            99988

>2ekl_A D-3-phosphoglycerate dehydrogenase; structural genomics, NPPSFA, national project on protein structural and functional analyses; HET: NAD; 1.77A {Sulfolobus tokodaii}

Probab=94.33  E-value=0.21  Score=43.89  Aligned_cols=89  Identities=19%  Similarity=0.183  Sum_probs=62.3

Q ss_pred             CCCCEEEEEcCCHHHHHHHHHHHHHCCCCeEEEEeCChhHHHHHHHcCCCEEEeCCCCcccHHHHHHHHHHHhCCCceEE
Q 017868          180 GPETNVLIMGAGPIGLVTMLGAPRAFGAPRIVIVDVDDYRLSVAKEIGADNIVKVSTNLQDIAEEVEKIQKAMGTGIDVS  259 (365)
Q Consensus       180 ~~g~~vlI~G~g~~G~~ai~~l~~~~g~~~vi~v~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~i~~~~~~~~~~~d~v  259 (365)
                      -.|.+|.|+|.|.+|..+++ .++.+|+ .|++.+++.++. .++++|+..        .++.+.+        ...|+|
T Consensus       140 l~g~~vgIIG~G~IG~~~A~-~l~~~G~-~V~~~d~~~~~~-~~~~~g~~~--------~~l~ell--------~~aDvV  200 (313)
T 2ekl_A          140 LAGKTIGIVGFGRIGTKVGI-IANAMGM-KVLAYDILDIRE-KAEKINAKA--------VSLEELL--------KNSDVI  200 (313)
T ss_dssp             CTTCEEEEESCSHHHHHHHH-HHHHTTC-EEEEECSSCCHH-HHHHTTCEE--------CCHHHHH--------HHCSEE
T ss_pred             CCCCEEEEEeeCHHHHHHHH-HHHHCCC-EEEEECCCcchh-HHHhcCcee--------cCHHHHH--------hhCCEE
Confidence            36789999999999999999 7788999 688888877664 456777642        1222222        257999


Q ss_pred             EeCCCCHH----HH-HHHHHhcccCCEEEEEcc
Q 017868          260 FDCAGLNK----TM-STALGATCAGGKVCLVGM  287 (365)
Q Consensus       260 id~~g~~~----~~-~~~~~~l~~~G~~~~~g~  287 (365)
                      +-++....    .+ ...+..+++++.++.++.
T Consensus       201 vl~~P~~~~t~~li~~~~l~~mk~ga~lIn~ar  233 (313)
T 2ekl_A          201 SLHVTVSKDAKPIIDYPQFELMKDNVIIVNTSR  233 (313)
T ss_dssp             EECCCCCTTSCCSBCHHHHHHSCTTEEEEESSC
T ss_pred             EEeccCChHHHHhhCHHHHhcCCCCCEEEECCC
Confidence            98776321    11 356678888888877764

>3tr6_A O-methyltransferase; cellular processes; HET: SAH; 2.70A {Coxiella burnetii} SCOP: c.66.1.0

Probab=94.33  E-value=0.43  Score=39.29  Aligned_cols=104  Identities=17%  Similarity=0.192  Sum_probs=64.2

Q ss_pred             CCCCCCEEEEEcCCHHHHHHHHHHHHHCC-CCeEEEEeCChhHHHHHHH----cCCCE-EEeCCCCcccHHHHHHHHHHH
Q 017868          178 NIGPETNVLIMGAGPIGLVTMLGAPRAFG-APRIVIVDVDDYRLSVAKE----IGADN-IVKVSTNLQDIAEEVEKIQKA  251 (365)
Q Consensus       178 ~~~~g~~vlI~G~g~~G~~ai~~l~~~~g-~~~vi~v~~~~~~~~~~~~----~g~~~-~~~~~~~~~~~~~~i~~~~~~  251 (365)
                      ...++.+||-.|+|. |..++. +++.++ ...+++++.+++..+.+++    .+... +....   .+..+.+......
T Consensus        61 ~~~~~~~vLdiG~G~-G~~~~~-la~~~~~~~~v~~vD~~~~~~~~a~~~~~~~~~~~~v~~~~---~d~~~~~~~~~~~  135 (225)
T 3tr6_A           61 KLMQAKKVIDIGTFT-GYSAIA-MGLALPKDGTLITCDVDEKSTALAKEYWEKAGLSDKIGLRL---SPAKDTLAELIHA  135 (225)
T ss_dssp             HHHTCSEEEEECCTT-SHHHHH-HHTTCCTTCEEEEEESCHHHHHHHHHHHHHTTCTTTEEEEE---SCHHHHHHHHHTT
T ss_pred             HhhCCCEEEEeCCcc-hHHHHH-HHHhCCCCCEEEEEeCCHHHHHHHHHHHHHCCCCCceEEEe---CCHHHHHHHhhhc
Confidence            345678999998864 667777 666654 4589999999987766544    35432 21111   2333333322110


Q ss_pred             -hCCCceEEEeCCCC---HHHHHHHHHhcccCCEEEEEc
Q 017868          252 -MGTGIDVSFDCAGL---NKTMSTALGATCAGGKVCLVG  286 (365)
Q Consensus       252 -~~~~~d~vid~~g~---~~~~~~~~~~l~~~G~~~~~g  286 (365)
                       ....+|+|+-....   ...+..+.+.|+++|.++...
T Consensus       136 ~~~~~fD~v~~~~~~~~~~~~l~~~~~~L~pgG~lv~~~  174 (225)
T 3tr6_A          136 GQAWQYDLIYIDADKANTDLYYEESLKLLREGGLIAVDN  174 (225)
T ss_dssp             TCTTCEEEEEECSCGGGHHHHHHHHHHHEEEEEEEEEEC
T ss_pred             cCCCCccEEEECCCHHHHHHHHHHHHHhcCCCcEEEEeC
Confidence             00689999853332   345678889999999998754

>1lu9_A Methylene tetrahydromethanopterin dehydrogenase; alpha/beta twisted open sheet structure, oxidoreductase; 1.90A {Methylobacterium extorquens} SCOP: c.2.1.7 c.58.1.4 PDB: 1lua_A*

Probab=94.31  E-value=0.2  Score=43.43  Aligned_cols=75  Identities=13%  Similarity=0.237  Sum_probs=47.4

Q ss_pred             CCCCEEEEEc-CCHHHHHHHHHHHHHCCCCeEEEEeCChhHHH-HHHHc----CCCE-EEeCCCCcccHHHHHHHHHHHh
Q 017868          180 GPETNVLIMG-AGPIGLVTMLGAPRAFGAPRIVIVDVDDYRLS-VAKEI----GADN-IVKVSTNLQDIAEEVEKIQKAM  252 (365)
Q Consensus       180 ~~g~~vlI~G-~g~~G~~ai~~l~~~~g~~~vi~v~~~~~~~~-~~~~~----g~~~-~~~~~~~~~~~~~~i~~~~~~~  252 (365)
                      -++.++||+| +|++|.+++. .+...|++ |+.++++.++.+ +++++    +... ..+..    +. +.+++.    
T Consensus       117 l~gk~vlVtGaaGGiG~aia~-~L~~~G~~-V~i~~R~~~~~~~l~~~~~~~~~~~~~~~D~~----~~-~~~~~~----  185 (287)
T 1lu9_A          117 VKGKKAVVLAGTGPVGMRSAA-LLAGEGAE-VVLCGRKLDKAQAAADSVNKRFKVNVTAAETA----DD-ASRAEA----  185 (287)
T ss_dssp             CTTCEEEEETCSSHHHHHHHH-HHHHTTCE-EEEEESSHHHHHHHHHHHHHHHTCCCEEEECC----SH-HHHHHH----
T ss_pred             CCCCEEEEECCCcHHHHHHHH-HHHHCcCE-EEEEECCHHHHHHHHHHHHhcCCcEEEEecCC----CH-HHHHHH----
Confidence            3678999998 5999999999 55566985 777888877654 33333    3221 12221    11 223332    


Q ss_pred             CCCceEEEeCCCC
Q 017868          253 GTGIDVSFDCAGL  265 (365)
Q Consensus       253 ~~~~d~vid~~g~  265 (365)
                      -..+|++|+++|.
T Consensus       186 ~~~~DvlVn~ag~  198 (287)
T 1lu9_A          186 VKGAHFVFTAGAI  198 (287)
T ss_dssp             TTTCSEEEECCCT
T ss_pred             HHhCCEEEECCCc
Confidence            2458999999973

>3m6w_A RRNA methylase; rRNA methyltransferase, 5-methylcytidine, RSMF, adoMet, MULT specific, methyltransferase, transferase; HET: CXM SAM; 1.30A {Thermus thermophilus} PDB: 3m6v_A* 3m6u_A* 3m6x_A*

Probab=94.31  E-value=0.23  Score=46.14  Aligned_cols=99  Identities=21%  Similarity=0.264  Sum_probs=61.7

Q ss_pred             cCCCCCCEEEEEcCCHHHHHHHHHHHHHCC-CCeEEEEeCChhHHHHH----HHcCCCEEEeCCCCcccHHHHHHHHHHH
Q 017868          177 ANIGPETNVLIMGAGPIGLVTMLGAPRAFG-APRIVIVDVDDYRLSVA----KEIGADNIVKVSTNLQDIAEEVEKIQKA  251 (365)
Q Consensus       177 ~~~~~g~~vlI~G~g~~G~~ai~~l~~~~g-~~~vi~v~~~~~~~~~~----~~~g~~~~~~~~~~~~~~~~~i~~~~~~  251 (365)
                      ..+++|++||=.|+|+ |..+++ ++..++ ...|++++.++++.+.+    +.+|.. +.....   |..+ +..   .
T Consensus        97 L~~~~g~~VLDlgaGp-G~kt~~-LA~~~~~~g~V~AvDis~~~l~~a~~n~~r~G~~-v~~~~~---Da~~-l~~---~  166 (464)
T 3m6w_A           97 LDPKPGERVLDLAAAP-GGKTTH-LAARMGGKGLLLANEVDGKRVRGLLENVERWGAP-LAVTQA---PPRA-LAE---A  166 (464)
T ss_dssp             HCCCTTCEEEESSCTT-CHHHHH-HHHHTTTCSEEEEECSCHHHHHHHHHHHHHHCCC-CEEECS---CHHH-HHH---H
T ss_pred             cCcCCCCEEEEEcCCc-CHHHHH-HHHhCCCCCEEEEEECCHHHHHHHHHHHHHcCCe-EEEEEC---CHHH-hhh---h
Confidence            4678999988877643 444555 444443 24799999999887654    456766 333222   2222 111   1


Q ss_pred             hCCCceEEEe---CCCC-------------------------HHHHHHHHHhcccCCEEEEE
Q 017868          252 MGTGIDVSFD---CAGL-------------------------NKTMSTALGATCAGGKVCLV  285 (365)
Q Consensus       252 ~~~~~d~vid---~~g~-------------------------~~~~~~~~~~l~~~G~~~~~  285 (365)
                      ....+|.|+-   |+|.                         ...+..+++.|+++|+++..
T Consensus       167 ~~~~FD~Il~D~PcSg~G~~rr~pd~~~~~~~~~~~~l~~~Q~~iL~~a~~~LkpGG~Lvys  228 (464)
T 3m6w_A          167 FGTYFHRVLLDAPCSGEGMFRKDREAARHWGPSAPKRMAEVQKALLAQASRLLGPGGVLVYS  228 (464)
T ss_dssp             HCSCEEEEEEECCCCCGGGTTTCTTSGGGCCTTHHHHHHHHHHHHHHHHHTTEEEEEEEEEE
T ss_pred             ccccCCEEEECCCcCCccccccChHHhhhcCHHHHHHHHHHHHHHHHHHHHhcCCCcEEEEE
Confidence            2568999984   4331                         23566788899999998864

>2fca_A TRNA (guanine-N(7)-)-methyltransferase; 2.10A {Bacillus subtilis} SCOP: c.66.1.53

Probab=94.30  E-value=0.46  Score=38.98  Aligned_cols=98  Identities=8%  Similarity=0.071  Sum_probs=62.2

Q ss_pred             CCCCEEEEEcCCHHHHHHHHHHHHHCCCCeEEEEeCChhHHHHHHH----cCCCEEEeCCCCcccHHHHHHHHHHHhCCC
Q 017868          180 GPETNVLIMGAGPIGLVTMLGAPRAFGAPRIVIVDVDDYRLSVAKE----IGADNIVKVSTNLQDIAEEVEKIQKAMGTG  255 (365)
Q Consensus       180 ~~g~~vlI~G~g~~G~~ai~~l~~~~g~~~vi~v~~~~~~~~~~~~----~g~~~~~~~~~~~~~~~~~i~~~~~~~~~~  255 (365)
                      .++.+||=.|+|. |..++. +++......+++++.+++..+.+++    .+...+.....+..++.    ..  .....
T Consensus        37 ~~~~~vLDiGcG~-G~~~~~-la~~~p~~~v~giD~s~~~l~~a~~~~~~~~~~nv~~~~~d~~~l~----~~--~~~~~  108 (213)
T 2fca_A           37 NDNPIHIEVGTGK-GQFISG-MAKQNPDINYIGIELFKSVIVTAVQKVKDSEAQNVKLLNIDADTLT----DV--FEPGE  108 (213)
T ss_dssp             SCCCEEEEECCTT-SHHHHH-HHHHCTTSEEEEECSCHHHHHHHHHHHHHSCCSSEEEECCCGGGHH----HH--CCTTS
T ss_pred             CCCceEEEEecCC-CHHHHH-HHHHCCCCCEEEEEechHHHHHHHHHHHHcCCCCEEEEeCCHHHHH----hh--cCcCC
Confidence            3567788788864 777777 6666544489999999987765543    45543333333333321    11  11356


Q ss_pred             ceEEEeCCC--------------CHHHHHHHHHhcccCCEEEEE
Q 017868          256 IDVSFDCAG--------------LNKTMSTALGATCAGGKVCLV  285 (365)
Q Consensus       256 ~d~vid~~g--------------~~~~~~~~~~~l~~~G~~~~~  285 (365)
                      +|.|+-...              ....+..+.+.|+++|.+++.
T Consensus       109 ~d~v~~~~~~p~~~~~~~~~rl~~~~~l~~~~~~LkpgG~l~~~  152 (213)
T 2fca_A          109 VKRVYLNFSDPWPKKRHEKRRLTYSHFLKKYEEVMGKGGSIHFK  152 (213)
T ss_dssp             CCEEEEESCCCCCSGGGGGGSTTSHHHHHHHHHHHTTSCEEEEE
T ss_pred             cCEEEEECCCCCcCccccccccCcHHHHHHHHHHcCCCCEEEEE
Confidence            888864332              135678889999999999876

>1qyd_A Pinoresinol-lariciresinol reductase; NADPH-dependent aromatic alcohol reductases, pcber, PLR, IFR, lignans, isoflavonoids, plant protein; 2.50A {Thuja plicata} SCOP: c.2.1.2

Probab=94.28  E-value=0.14  Score=44.67  Aligned_cols=74  Identities=20%  Similarity=0.302  Sum_probs=44.6

Q ss_pred             CCEEEEEcC-CHHHHHHHHHHHHHCCCCeEEEEeCC-----hhHHHHHHH---cCCCEEEeCCCCcccHHHHHHHHHHHh
Q 017868          182 ETNVLIMGA-GPIGLVTMLGAPRAFGAPRIVIVDVD-----DYRLSVAKE---IGADNIVKVSTNLQDIAEEVEKIQKAM  252 (365)
Q Consensus       182 g~~vlI~G~-g~~G~~ai~~l~~~~g~~~vi~v~~~-----~~~~~~~~~---~g~~~~~~~~~~~~~~~~~i~~~~~~~  252 (365)
                      ..+|||+|+ |.+|..+++.| ...|.+ |++++++     +++.+.++.   .++. ++..+-  .+. +.+.+..   
T Consensus         4 ~~~ilVtGatG~iG~~l~~~L-~~~g~~-V~~~~R~~~~~~~~~~~~~~~~~~~~~~-~~~~D~--~d~-~~l~~~~---   74 (313)
T 1qyd_A            4 KSRVLIVGGTGYIGKRIVNAS-ISLGHP-TYVLFRPEVVSNIDKVQMLLYFKQLGAK-LIEASL--DDH-QRLVDAL---   74 (313)
T ss_dssp             CCCEEEESTTSTTHHHHHHHH-HHTTCC-EEEECCSCCSSCHHHHHHHHHHHTTTCE-EECCCS--SCH-HHHHHHH---
T ss_pred             CCEEEEEcCCcHHHHHHHHHH-HhCCCc-EEEEECCCcccchhHHHHHHHHHhCCeE-EEeCCC--CCH-HHHHHHH---
Confidence            357999997 99999999944 455884 6666665     344444333   2432 232221  222 2343332   


Q ss_pred             CCCceEEEeCCCC
Q 017868          253 GTGIDVSFDCAGL  265 (365)
Q Consensus       253 ~~~~d~vid~~g~  265 (365)
                       .++|+||.+++.
T Consensus        75 -~~~d~vi~~a~~   86 (313)
T 1qyd_A           75 -KQVDVVISALAG   86 (313)
T ss_dssp             -TTCSEEEECCCC
T ss_pred             -hCCCEEEECCcc
Confidence             469999998874

>1uir_A Polyamine aminopropyltransferase; spermidien synthase, spermine synthase, riken STR genomics/proteomics initiative, RSGI; 2.00A {Thermus thermophilus} SCOP: c.66.1.17 PDB: 3anx_A*

Probab=94.27  E-value=0.4  Score=42.16  Aligned_cols=98  Identities=21%  Similarity=0.174  Sum_probs=62.4

Q ss_pred             CCCCEEEEEcCCHHHHHHHHHHHHHCCCCeEEEEeCChhHHHHHHHcC---------CCEEEeCCCCcccHHHHHHHHHH
Q 017868          180 GPETNVLIMGAGPIGLVTMLGAPRAFGAPRIVIVDVDDYRLSVAKEIG---------ADNIVKVSTNLQDIAEEVEKIQK  250 (365)
Q Consensus       180 ~~g~~vlI~G~g~~G~~ai~~l~~~~g~~~vi~v~~~~~~~~~~~~~g---------~~~~~~~~~~~~~~~~~i~~~~~  250 (365)
                      ..+.+||+.|+|. |..+.. +++..+...+++++.+++-.+.+++.-         ...+....   .|..+.+..   
T Consensus        76 ~~~~~VLdiG~G~-G~~~~~-l~~~~~~~~v~~vDid~~~i~~ar~~~~~~~~~~~~~~~v~~~~---~D~~~~l~~---  147 (314)
T 1uir_A           76 PEPKRVLIVGGGE-GATLRE-VLKHPTVEKAVMVDIDGELVEVAKRHMPEWHQGAFDDPRAVLVI---DDARAYLER---  147 (314)
T ss_dssp             SCCCEEEEEECTT-SHHHHH-HTTSTTCCEEEEEESCHHHHHHHHHHCHHHHTTGGGCTTEEEEE---SCHHHHHHH---
T ss_pred             CCCCeEEEEcCCc-CHHHHH-HHhcCCCCEEEEEECCHHHHHHHHHHhHhhccccccCCceEEEE---chHHHHHHh---
Confidence            4568999998754 556666 666655668999999998877776521         11111111   233222222   


Q ss_pred             HhCCCceEEEeCC-------C------CHHHHHHHHHhcccCCEEEEEc
Q 017868          251 AMGTGIDVSFDCA-------G------LNKTMSTALGATCAGGKVCLVG  286 (365)
Q Consensus       251 ~~~~~~d~vid~~-------g------~~~~~~~~~~~l~~~G~~~~~g  286 (365)
                       ....+|+|+...       +      ....+..+.++|+++|.++...
T Consensus       148 -~~~~fD~Ii~d~~~~~~~~~~~~~l~~~~~l~~~~~~LkpgG~lv~~~  195 (314)
T 1uir_A          148 -TEERYDVVIIDLTDPVGEDNPARLLYTVEFYRLVKAHLNPGGVMGMQT  195 (314)
T ss_dssp             -CCCCEEEEEEECCCCBSTTCGGGGGSSHHHHHHHHHTEEEEEEEEEEE
T ss_pred             -cCCCccEEEECCCCcccccCcchhccHHHHHHHHHHhcCCCcEEEEEc
Confidence             256899998532       1      2356778899999999998763

>3i6i_A Putative leucoanthocyanidin reductase 1; rossmann fold, short chain dehydrogenase reductase, flavonoi oxidoreductase; HET: NDP; 1.75A {Vitis vinifera} PDB: 3i5m_A 3i52_A* 3i6q_A*

Probab=94.27  E-value=0.11  Score=46.37  Aligned_cols=76  Identities=29%  Similarity=0.291  Sum_probs=45.4

Q ss_pred             CCEEEEEcC-CHHHHHHHHHHHHHCCCCeEEEEeCCh----hHHHHHH---HcCCCEEEeCCCCcccHHHHHHHHHHHhC
Q 017868          182 ETNVLIMGA-GPIGLVTMLGAPRAFGAPRIVIVDVDD----YRLSVAK---EIGADNIVKVSTNLQDIAEEVEKIQKAMG  253 (365)
Q Consensus       182 g~~vlI~G~-g~~G~~ai~~l~~~~g~~~vi~v~~~~----~~~~~~~---~~g~~~~~~~~~~~~~~~~~i~~~~~~~~  253 (365)
                      ..+|||+|+ |.+|..+++.+ ...|.+ |+++++++    ++.+.++   ..++.. +..+-  .+. +.+.+..+  .
T Consensus        10 ~~~IlVtGatG~iG~~l~~~L-~~~g~~-V~~l~R~~~~~~~~~~~~~~l~~~~v~~-~~~Dl--~d~-~~l~~~~~--~   81 (346)
T 3i6i_A           10 KGRVLIAGATGFIGQFVATAS-LDAHRP-TYILARPGPRSPSKAKIFKALEDKGAII-VYGLI--NEQ-EAMEKILK--E   81 (346)
T ss_dssp             -CCEEEECTTSHHHHHHHHHH-HHTTCC-EEEEECSSCCCHHHHHHHHHHHHTTCEE-EECCT--TCH-HHHHHHHH--H
T ss_pred             CCeEEEECCCcHHHHHHHHHH-HHCCCC-EEEEECCCCCChhHHHHHHHHHhCCcEE-EEeec--CCH-HHHHHHHh--h
Confidence            358999998 99999999944 456875 56665654    4444333   334433 22222  222 23333322  2


Q ss_pred             CCceEEEeCCCC
Q 017868          254 TGIDVSFDCAGL  265 (365)
Q Consensus       254 ~~~d~vid~~g~  265 (365)
                      .++|+||.+++.
T Consensus        82 ~~~d~Vi~~a~~   93 (346)
T 3i6i_A           82 HEIDIVVSTVGG   93 (346)
T ss_dssp             TTCCEEEECCCG
T ss_pred             CCCCEEEECCch
Confidence            389999999884

>2dbq_A Glyoxylate reductase; D-3-phosphoglycerate dehydrogenase, ST genomics, NPPSFA; HET: NAP; 1.70A {Pyrococcus horikoshii} PDB: 2dbr_A* 2dbz_A*

Probab=94.24  E-value=0.25  Score=43.83  Aligned_cols=87  Identities=16%  Similarity=0.210  Sum_probs=59.6

Q ss_pred             CCCEEEEEcCCHHHHHHHHHHHHHCCCCeEEEEeCChhHHHHHHHcCCCEEEeCCCCcccHHHHHHHHHHHhCCCceEEE
Q 017868          181 PETNVLIMGAGPIGLVTMLGAPRAFGAPRIVIVDVDDYRLSVAKEIGADNIVKVSTNLQDIAEEVEKIQKAMGTGIDVSF  260 (365)
Q Consensus       181 ~g~~vlI~G~g~~G~~ai~~l~~~~g~~~vi~v~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~i~~~~~~~~~~~d~vi  260 (365)
                      .|.+|.|+|.|.+|..+++ .++..|. .|++.+++.++ +.+.++|+..        .++.+.+        ...|+|+
T Consensus       149 ~g~~vgIIG~G~iG~~iA~-~l~~~G~-~V~~~d~~~~~-~~~~~~g~~~--------~~l~~~l--------~~aDvVi  209 (334)
T 2dbq_A          149 YGKTIGIIGLGRIGQAIAK-RAKGFNM-RILYYSRTRKE-EVERELNAEF--------KPLEDLL--------RESDFVV  209 (334)
T ss_dssp             TTCEEEEECCSHHHHHHHH-HHHHTTC-EEEEECSSCCH-HHHHHHCCEE--------CCHHHHH--------HHCSEEE
T ss_pred             CCCEEEEEccCHHHHHHHH-HHHhCCC-EEEEECCCcch-hhHhhcCccc--------CCHHHHH--------hhCCEEE
Confidence            5678999999999999999 6678898 68888887776 5556666521        1222222        2478888


Q ss_pred             eCCCCHH----HH-HHHHHhcccCCEEEEEc
Q 017868          261 DCAGLNK----TM-STALGATCAGGKVCLVG  286 (365)
Q Consensus       261 d~~g~~~----~~-~~~~~~l~~~G~~~~~g  286 (365)
                      .++....    .+ ...+..++++..++..+
T Consensus       210 l~vp~~~~t~~~i~~~~~~~mk~~ailIn~s  240 (334)
T 2dbq_A          210 LAVPLTRETYHLINEERLKLMKKTAILINIA  240 (334)
T ss_dssp             ECCCCCTTTTTCBCHHHHHHSCTTCEEEECS
T ss_pred             ECCCCChHHHHhhCHHHHhcCCCCcEEEECC
Confidence            8776432    11 24566788877777665

>3icc_A Putative 3-oxoacyl-(acyl carrier protein) reducta; structural genomics, putative 3-oxoacyl-(acyl carrier protei reductase, oxidoreductase; HET: NAP MES; 1.87A {Bacillus anthracis str}

Probab=94.24  E-value=0.1  Score=44.10  Aligned_cols=83  Identities=16%  Similarity=0.181  Sum_probs=45.6

Q ss_pred             CCCEEEEEcC-CHHHHHHHHHHHHHCCCCeEEEEeCChhHHH-HH---HHcCCCE-EEeCCCC-cccHHHHHHHHHHHh-
Q 017868          181 PETNVLIMGA-GPIGLVTMLGAPRAFGAPRIVIVDVDDYRLS-VA---KEIGADN-IVKVSTN-LQDIAEEVEKIQKAM-  252 (365)
Q Consensus       181 ~g~~vlI~G~-g~~G~~ai~~l~~~~g~~~vi~v~~~~~~~~-~~---~~~g~~~-~~~~~~~-~~~~~~~i~~~~~~~-  252 (365)
                      ++.++||+|+ +++|.++++.++ ..|+++++...++.++.+ .+   ++.+... .+..+-. ..+....++++.+.. 
T Consensus         6 ~~k~vlITGas~gIG~~~a~~l~-~~G~~v~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~D~~~~~~~~~~~~~~~~~~~   84 (255)
T 3icc_A            6 KGKVALVTGASRGIGRAIAKRLA-NDGALVAIHYGNRKEEAEETVYEIQSNGGSAFSIGANLESLHGVEALYSSLDNELQ   84 (255)
T ss_dssp             TTCEEEETTCSSHHHHHHHHHHH-HTTCEEEEEESSCSHHHHHHHHHHHHTTCEEEEEECCTTSHHHHHHHHHHHHHHHH
T ss_pred             CCCEEEEECCCChHHHHHHHHHH-HCCCeEEEEeCCchHHHHHHHHHHHhcCCceEEEecCcCCHHHHHHHHHHHHHHhc
Confidence            5788999987 999999999555 569954444455554433 22   3333322 2222221 122222222222211 


Q ss_pred             ----CCCceEEEeCCC
Q 017868          253 ----GTGIDVSFDCAG  264 (365)
Q Consensus       253 ----~~~~d~vid~~g  264 (365)
                          ..++|++|.++|
T Consensus        85 ~~~~~~~id~lv~nAg  100 (255)
T 3icc_A           85 NRTGSTKFDILINNAG  100 (255)
T ss_dssp             HHHSSSCEEEEEECCC
T ss_pred             ccccCCcccEEEECCC
Confidence                235999999887

>1sqg_A SUN protein, FMU protein; rossmann-fold, mixed beta sheet, methyltransferase-fold, RNA-binding domain; 1.65A {Escherichia coli} SCOP: a.79.1.3 c.66.1.38 PDB: 1sqf_A

Probab=94.23  E-value=0.26  Score=45.46  Aligned_cols=102  Identities=17%  Similarity=0.179  Sum_probs=64.7

Q ss_pred             HhcCCCCCCEEEEEcCCHHHHHHHHHHHHHCCCCeEEEEeCChhHHHHHH----HcCCC-EEEeCCCCcccHHHHHHHHH
Q 017868          175 RRANIGPETNVLIMGAGPIGLVTMLGAPRAFGAPRIVIVDVDDYRLSVAK----EIGAD-NIVKVSTNLQDIAEEVEKIQ  249 (365)
Q Consensus       175 ~~~~~~~g~~vlI~G~g~~G~~ai~~l~~~~g~~~vi~v~~~~~~~~~~~----~~g~~-~~~~~~~~~~~~~~~i~~~~  249 (365)
                      .....++|++||=.|+|+ |..+.+ +++..+...+++++.++.+.+.++    .+|.. .++.  .+..++...   + 
T Consensus       240 ~~l~~~~g~~VLDlgaG~-G~~t~~-la~~~~~~~v~a~D~~~~~l~~~~~~~~~~g~~~~~~~--~D~~~~~~~---~-  311 (429)
T 1sqg_A          240 TWLAPQNGEHILDLCAAP-GGKTTH-ILEVAPEAQVVAVDIDEQRLSRVYDNLKRLGMKATVKQ--GDGRYPSQW---C-  311 (429)
T ss_dssp             HHHCCCTTCEEEEESCTT-CHHHHH-HHHHCTTCEEEEEESSTTTHHHHHHHHHHTTCCCEEEE--CCTTCTHHH---H-
T ss_pred             HHcCCCCcCeEEEECCCc-hHHHHH-HHHHcCCCEEEEECCCHHHHHHHHHHHHHcCCCeEEEe--Cchhhchhh---c-
Confidence            344678999999988755 556666 555554348999999998776553    34643 2222  222232211   1 


Q ss_pred             HHhCCCceEEEe---CCCC-------------------------HHHHHHHHHhcccCCEEEEEc
Q 017868          250 KAMGTGIDVSFD---CAGL-------------------------NKTMSTALGATCAGGKVCLVG  286 (365)
Q Consensus       250 ~~~~~~~d~vid---~~g~-------------------------~~~~~~~~~~l~~~G~~~~~g  286 (365)
                        .+..+|.|+-   |+|.                         ...+..+.+.|+++|+++...
T Consensus       312 --~~~~fD~Vl~D~Pcsg~g~~~~~p~~~~~~~~~~~~~l~~~q~~~L~~a~~~LkpGG~lvyst  374 (429)
T 1sqg_A          312 --GEQQFDRILLDAPCSATGVIRRHPDIKWLRRDRDIPELAQLQSEILDAIWPHLKTGGTLVYAT  374 (429)
T ss_dssp             --TTCCEEEEEEECCCCCGGGTTTCTTHHHHCCTTHHHHHHHHHHHHHHHHGGGEEEEEEEEEEE
T ss_pred             --ccCCCCEEEEeCCCCcccccCCCcchhhcCCHHHHHHHHHHHHHHHHHHHHhcCCCCEEEEEE
Confidence              1467999985   5442                         135667888999999988754

>2nvw_A Galactose/lactose metabolism regulatory protein GAL80; transcription, galactose metabolism, repressor; 2.10A {Kluyveromyces lactis} SCOP: c.2.1.3 d.81.1.5 PDB: 3e1k_A

Probab=94.20  E-value=0.35  Score=45.27  Aligned_cols=136  Identities=9%  Similarity=0.023  Sum_probs=80.4

Q ss_pred             CEEEEEcC----CHHHHHHHHHHHHH-CCCCeEEEEeCChhHHH-HHHHcCCCEEEeCCCCcccHHHHHHHHHHHhCCCc
Q 017868          183 TNVLIMGA----GPIGLVTMLGAPRA-FGAPRIVIVDVDDYRLS-VAKEIGADNIVKVSTNLQDIAEEVEKIQKAMGTGI  256 (365)
Q Consensus       183 ~~vlI~G~----g~~G~~ai~~l~~~-~g~~~vi~v~~~~~~~~-~~~~~g~~~~~~~~~~~~~~~~~i~~~~~~~~~~~  256 (365)
                      -+|.|+|+    |.+|...+..+.+. -+++.+.++++++++.+ +++++|+..+..+    .++.+.+    +  ...+
T Consensus        40 irvgiIG~g~~GG~~g~~h~~~l~~~~~~~~lvav~d~~~~~a~~~a~~~g~~~~~~~----~d~~ell----~--~~~v  109 (479)
T 2nvw_A           40 IRVGFVGLTSGKSWVAKTHFLAIQQLSSQFQIVALYNPTLKSSLQTIEQLQLKHATGF----DSLESFA----Q--YKDI  109 (479)
T ss_dssp             EEEEEECCCSTTSHHHHTHHHHHHHTTTTEEEEEEECSCHHHHHHHHHHTTCTTCEEE----SCHHHHH----H--CTTC
T ss_pred             CEEEEEcccCCCCHHHHHHHHHHHhcCCCeEEEEEEeCCHHHHHHHHHHcCCCcceee----CCHHHHh----c--CCCC
Confidence            36889998    88898777745444 46755566677777665 5677887521112    2343333    2  3579


Q ss_pred             eEEEeCCCCHHHHHHHHHhcccCC-----EEEEEccCCCCccccchH----hhhcC-cEEEeec--ccCCcHHHHHHHHH
Q 017868          257 DVSFDCAGLNKTMSTALGATCAGG-----KVCLVGMGHHEMTVPLTP----AAVRE-VDVVGVF--RYKNTWPLCLELLR  324 (365)
Q Consensus       257 d~vid~~g~~~~~~~~~~~l~~~G-----~~~~~g~~~~~~~~~~~~----~~~~~-~~i~~~~--~~~~~~~~~~~~l~  324 (365)
                      |+|+.|+....+...+..+|..+.     +-+++.-+..........    .-.++ +.+.-.+  .+...++.+.++++
T Consensus       110 D~V~I~tp~~~H~~~~~~al~aG~~~~~~khVl~EKPla~~~~ea~~l~~~a~~~g~~~~~v~~~~R~~p~~~~~k~~i~  189 (479)
T 2nvw_A          110 DMIVVSVKVPEHYEVVKNILEHSSQNLNLRYLYVEWALAASVQQAEELYSISQQRANLQTIICLQGRKSPYIVRAKELIS  189 (479)
T ss_dssp             SEEEECSCHHHHHHHHHHHHHHSSSCSSCCEEEEESSSSSSHHHHHHHHHHHHTCTTCEEEEECGGGGCHHHHHHHHHHH
T ss_pred             CEEEEcCCcHHHHHHHHHHHHCCCCcCCceeEEEeCCCcCCHHHHHHHHHHHHHcCCeEEEEEeccccCHHHHHHHHHHH
Confidence            999999998778788888888661     434443111100101111    12233 3333222  23567888889999


Q ss_pred             cCCC
Q 017868          325 SGKI  328 (365)
Q Consensus       325 ~g~~  328 (365)
                      +|.+
T Consensus       190 ~G~i  193 (479)
T 2nvw_A          190 EGCI  193 (479)
T ss_dssp             TTTT
T ss_pred             cCCC
Confidence            9887

>3kkz_A Uncharacterized protein Q5LES9; putative methyltransferase, BFR250, NESG, structural genomics, PSI-2; HET: SAM; 1.68A {Bacteroides fragilis nctc 9343} PDB: 3e7p_A 3t7s_A* 3t7r_A* 3t7t_A*

Probab=94.18  E-value=0.29  Score=41.67  Aligned_cols=96  Identities=14%  Similarity=0.188  Sum_probs=63.7

Q ss_pred             CCCCCCEEEEEcCCHHHHHHHHHHHHHCCCCeEEEEeCChhHHHHHHH----cCCC---EEEeCCCCcccHHHHHHHHHH
Q 017868          178 NIGPETNVLIMGAGPIGLVTMLGAPRAFGAPRIVIVDVDDYRLSVAKE----IGAD---NIVKVSTNLQDIAEEVEKIQK  250 (365)
Q Consensus       178 ~~~~g~~vlI~G~g~~G~~ai~~l~~~~g~~~vi~v~~~~~~~~~~~~----~g~~---~~~~~~~~~~~~~~~i~~~~~  250 (365)
                      .++++.+||-.|+|. |..+.. +++. +...+++++.++...+.+++    .+..   .++.  .+..++.        
T Consensus        43 ~~~~~~~vLDiGcG~-G~~~~~-la~~-~~~~v~gvD~s~~~~~~a~~~~~~~~~~~~v~~~~--~d~~~~~--------  109 (267)
T 3kkz_A           43 NLTEKSLIADIGCGT-GGQTMV-LAGH-VTGQVTGLDFLSGFIDIFNRNARQSGLQNRVTGIV--GSMDDLP--------  109 (267)
T ss_dssp             CCCTTCEEEEETCTT-CHHHHH-HHTT-CSSEEEEEESCHHHHHHHHHHHHHTTCTTTEEEEE--CCTTSCC--------
T ss_pred             cCCCCCEEEEeCCCC-CHHHHH-HHhc-cCCEEEEEeCCHHHHHHHHHHHHHcCCCcCcEEEE--cChhhCC--------
Confidence            478899999999864 777777 6666 44489999999987766544    3432   2222  1111110        


Q ss_pred             HhCCCceEEEeC-----CCCHHHHHHHHHhcccCCEEEEEc
Q 017868          251 AMGTGIDVSFDC-----AGLNKTMSTALGATCAGGKVCLVG  286 (365)
Q Consensus       251 ~~~~~~d~vid~-----~g~~~~~~~~~~~l~~~G~~~~~g  286 (365)
                      .....+|+|+..     .+....+..+.+.|+++|.+++..
T Consensus       110 ~~~~~fD~i~~~~~~~~~~~~~~l~~~~~~LkpgG~l~~~~  150 (267)
T 3kkz_A          110 FRNEELDLIWSEGAIYNIGFERGLNEWRKYLKKGGYLAVSE  150 (267)
T ss_dssp             CCTTCEEEEEESSCGGGTCHHHHHHHHGGGEEEEEEEEEEE
T ss_pred             CCCCCEEEEEEcCCceecCHHHHHHHHHHHcCCCCEEEEEE
Confidence            014679999863     233456778889999999998764

>3f4k_A Putative methyltransferase; structural genomics, PSI-2, protein structure initiative, northeast structural genomics consortium, NESG; 2.30A {Bacteroides thetaiotaomicron} PDB: 3t0i_A* 3svz_A* 3sxj_A*

Probab=94.18  E-value=0.099  Score=44.27  Aligned_cols=97  Identities=12%  Similarity=0.213  Sum_probs=65.6

Q ss_pred             cCCCCCCEEEEEcCCHHHHHHHHHHHHHCCCCeEEEEeCChhHHHHHHH----cCCC---EEEeCCCCcccHHHHHHHHH
Q 017868          177 ANIGPETNVLIMGAGPIGLVTMLGAPRAFGAPRIVIVDVDDYRLSVAKE----IGAD---NIVKVSTNLQDIAEEVEKIQ  249 (365)
Q Consensus       177 ~~~~~g~~vlI~G~g~~G~~ai~~l~~~~g~~~vi~v~~~~~~~~~~~~----~g~~---~~~~~~~~~~~~~~~i~~~~  249 (365)
                      ..+.++.+||-.|+|. |..+.. +++..+. .+++++.++...+.+++    .|..   .++.  .+..++.       
T Consensus        42 ~~~~~~~~vLDiG~G~-G~~~~~-l~~~~~~-~v~~vD~s~~~~~~a~~~~~~~~~~~~~~~~~--~d~~~~~-------  109 (257)
T 3f4k_A           42 NELTDDAKIADIGCGT-GGQTLF-LADYVKG-QITGIDLFPDFIEIFNENAVKANCADRVKGIT--GSMDNLP-------  109 (257)
T ss_dssp             CCCCTTCEEEEETCTT-SHHHHH-HHHHCCS-EEEEEESCHHHHHHHHHHHHHTTCTTTEEEEE--CCTTSCS-------
T ss_pred             hcCCCCCeEEEeCCCC-CHHHHH-HHHhCCC-eEEEEECCHHHHHHHHHHHHHcCCCCceEEEE--CChhhCC-------
Confidence            4678899999999865 777777 7777665 89999999987766544    3432   1222  1111210       


Q ss_pred             HHhCCCceEEEe-----CCCCHHHHHHHHHhcccCCEEEEEc
Q 017868          250 KAMGTGIDVSFD-----CAGLNKTMSTALGATCAGGKVCLVG  286 (365)
Q Consensus       250 ~~~~~~~d~vid-----~~g~~~~~~~~~~~l~~~G~~~~~g  286 (365)
                       .....+|+|+.     ..+....+..+.++|+++|.+++..
T Consensus       110 -~~~~~fD~v~~~~~l~~~~~~~~l~~~~~~L~pgG~l~~~~  150 (257)
T 3f4k_A          110 -FQNEELDLIWSEGAIYNIGFERGMNEWSKYLKKGGFIAVSE  150 (257)
T ss_dssp             -SCTTCEEEEEEESCSCCCCHHHHHHHHHTTEEEEEEEEEEE
T ss_pred             -CCCCCEEEEEecChHhhcCHHHHHHHHHHHcCCCcEEEEEE
Confidence             01468999975     2333457778889999999998765

>3e82_A Putative oxidoreductase; NAD, GFO/IDH/MOCA family, PSI-2, NYSGXRC, 11136F, structural genomics, protein structure initiative; 2.04A {Klebsiella pneumoniae subsp}

Probab=94.17  E-value=0.33  Score=43.63  Aligned_cols=128  Identities=14%  Similarity=0.188  Sum_probs=76.1

Q ss_pred             CEEEEEcCCHHHHH-HHHHHHHHCCCCeEEEEeCChhHHHHHHHcCCCEEEeCCCCcccHHHHHHHHHHHhCCCceEEEe
Q 017868          183 TNVLIMGAGPIGLV-TMLGAPRAFGAPRIVIVDVDDYRLSVAKEIGADNIVKVSTNLQDIAEEVEKIQKAMGTGIDVSFD  261 (365)
Q Consensus       183 ~~vlI~G~g~~G~~-ai~~l~~~~g~~~vi~v~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~i~~~~~~~~~~~d~vid  261 (365)
                      -+|.|+|+|.+|.. .+..+.+.-+++.+.++++++++..  ++++.....      .++.+.+.      ...+|+|+.
T Consensus         8 ~rvgiiG~G~~g~~~~~~~l~~~~~~~l~av~d~~~~~~~--~~~~~~~~~------~~~~~ll~------~~~~D~V~i   73 (364)
T 3e82_A            8 INIALIGYGFVGKTFHAPLIRSVPGLNLAFVASRDEEKVK--RDLPDVTVI------ASPEAAVQ------HPDVDLVVI   73 (364)
T ss_dssp             EEEEEECCSHHHHHTHHHHHHTSTTEEEEEEECSCHHHHH--HHCTTSEEE------SCHHHHHT------CTTCSEEEE
T ss_pred             ceEEEECCCHHHHHHHHHHHhhCCCeEEEEEEcCCHHHHH--hhCCCCcEE------CCHHHHhc------CCCCCEEEE
Confidence            36889999999984 6663444447755556677776644  455443332      24433331      357999999


Q ss_pred             CCCCHHHHHHHHHhcccCCEEEEEccCCCCccccchH-------hhhcCcEEEeec--ccCCcHHHHHHHHHcCCC
Q 017868          262 CAGLNKTMSTALGATCAGGKVCLVGMGHHEMTVPLTP-------AAVREVDVVGVF--RYKNTWPLCLELLRSGKI  328 (365)
Q Consensus       262 ~~g~~~~~~~~~~~l~~~G~~~~~g~~~~~~~~~~~~-------~~~~~~~i~~~~--~~~~~~~~~~~~l~~g~~  328 (365)
                      |+....+...+..++..+ +-+++.   .+.......       .-.+++.+.-.+  .+...++.+.+++++|.+
T Consensus        74 ~tp~~~H~~~~~~al~aG-k~Vl~E---KPla~~~~e~~~l~~~a~~~g~~~~v~~~~r~~p~~~~~~~~i~~g~i  145 (364)
T 3e82_A           74 ASPNATHAPLARLALNAG-KHVVVD---KPFTLDMQEARELIALAEEKQRLLSVFHNRRWDSDYLGIRQVIEQGTL  145 (364)
T ss_dssp             CSCGGGHHHHHHHHHHTT-CEEEEC---SCSCSSHHHHHHHHHHHHHTTCCEEECCCCTTCHHHHHHHHHHHHTTT
T ss_pred             eCChHHHHHHHHHHHHCC-CcEEEe---CCCcCCHHHHHHHHHHHHHhCCeEEEEeecccCHHHHHHHHHHHcCCC
Confidence            999877888888888765 445553   211111111       112333332222  235567888899999887

>4ggo_A Trans-2-enoyl-COA reductase; rossmann fold, oxidoreductase; 2.00A {Treponema denticola atcc 35405} PDB: 4ggp_A

Probab=94.16  E-value=0.36  Score=43.43  Aligned_cols=85  Identities=21%  Similarity=0.244  Sum_probs=51.8

Q ss_pred             CCCCCEEEEEcC-CHHHHHHHHHHHHHCCCCeEEEEeCChh----------------HHHHHHHcCCCEE-EeCCCCc-c
Q 017868          179 IGPETNVLIMGA-GPIGLVTMLGAPRAFGAPRIVIVDVDDY----------------RLSVAKEIGADNI-VKVSTNL-Q  239 (365)
Q Consensus       179 ~~~g~~vlI~G~-g~~G~~ai~~l~~~~g~~~vi~v~~~~~----------------~~~~~~~~g~~~~-~~~~~~~-~  239 (365)
                      ...++++||+|+ +++|+++...+|...|+ .++++....+                -.+.+++.|.... ++.+-.+ +
T Consensus        47 ~~~pK~vLVtGaSsGiGlA~AialAf~~GA-~vi~v~~~~~~~~~~~atag~~~~~a~~~~i~~~G~~a~~i~~Dv~d~e  125 (401)
T 4ggo_A           47 AKAPKNVLVLGCSNGYGLASRITAAFGYGA-ATIGVSFEKAGSETKYGTPGWYNNLAFDEAAKREGLYSVTIDGDAFSDE  125 (401)
T ss_dssp             SCCCCEEEEESCSSHHHHHHHHHHHHHHCC-EEEEEECCCCCCSSSCCCHHHHHHHHHHHHHHHHTCCEEEEESCTTSHH
T ss_pred             cCCCCEEEEECCCCcHHHHHHHHHHhhCCC-CEEEEecCCcccccccccccchhHHHHHHHHHHcCCCceeEeCCCCCHH
Confidence            345789999987 99999876646645588 4666644321                1245666676443 4443333 3


Q ss_pred             cHHHHHHHHHHHhCCCceEEEeCCCC
Q 017868          240 DIAEEVEKIQKAMGTGIDVSFDCAGL  265 (365)
Q Consensus       240 ~~~~~i~~~~~~~~~~~d~vid~~g~  265 (365)
                      ...+.+.++.+ ..+++|+++.+++.
T Consensus       126 ~i~~vi~~i~~-~~G~IDiLVhS~A~  150 (401)
T 4ggo_A          126 IKAQVIEEAKK-KGIKFDLIVYSLAS  150 (401)
T ss_dssp             HHHHHHHHHHH-TTCCEEEEEECCCC
T ss_pred             HHHHHHHHHHH-hcCCCCEEEEeccc
Confidence            33333344433 46799999998774

>4eue_A Putative reductase CA_C0462; TER, biofuel, synthetic biology, catalytic mechan substrate specificity, oxidoreductase; HET: NAI; 2.00A {Clostridium acetobutylicum} PDB: 4euf_A* 4euh_A*

Probab=94.15  E-value=0.41  Score=43.86  Aligned_cols=86  Identities=19%  Similarity=0.106  Sum_probs=50.9

Q ss_pred             cCCCCCCEEEEEcC-CHHHHH--HHHHHHHHCCCCeEEEEeCCh---------------hH-HHHHHHcCCCE-EEeCCC
Q 017868          177 ANIGPETNVLIMGA-GPIGLV--TMLGAPRAFGAPRIVIVDVDD---------------YR-LSVAKEIGADN-IVKVST  236 (365)
Q Consensus       177 ~~~~~g~~vlI~G~-g~~G~~--ai~~l~~~~g~~~vi~v~~~~---------------~~-~~~~~~~g~~~-~~~~~~  236 (365)
                      ..+..|.++||+|+ +++|.+  .+. .....|+ .|+.+.++.               +. .+.+++.|... .+..+-
T Consensus        55 ~~~~~gK~aLVTGassGIG~A~aia~-ala~~Ga-~Vi~~~r~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~Dv  132 (418)
T 4eue_A           55 IGFRGPKKVLIVGASSGFGLATRISV-AFGGPEA-HTIGVSYETGATDRRIGTAGWYNNIFFKEFAKKKGLVAKNFIEDA  132 (418)
T ss_dssp             CCCCCCSEEEEESCSSHHHHHHHHHH-HHSSSCC-EEEEEECCCCCCSSCCCCHHHHHHHHHHHHHHHTTCCEEEEESCT
T ss_pred             CcCCCCCEEEEECCCcHHHHHHHHHH-HHHhCCC-EEEEEecCcchhhhcccccccchHHHHHHHHHHcCCcEEEEEeeC
Confidence            44577889999987 899998  555 3334588 566665532               11 23445566543 222222


Q ss_pred             -CcccHHHHHHHHHHHhCCCceEEEeCCCC
Q 017868          237 -NLQDIAEEVEKIQKAMGTGIDVSFDCAGL  265 (365)
Q Consensus       237 -~~~~~~~~i~~~~~~~~~~~d~vid~~g~  265 (365)
                       +.++....++++.+. -+++|+++.++|.
T Consensus       133 td~~~v~~~v~~i~~~-~G~IDiLVnNAG~  161 (418)
T 4eue_A          133 FSNETKDKVIKYIKDE-FGKIDLFVYSLAA  161 (418)
T ss_dssp             TCHHHHHHHHHHHHHT-TCCEEEEEECCCC
T ss_pred             CCHHHHHHHHHHHHHH-cCCCCEEEECCcc
Confidence             223344444444432 3689999998875

>1dus_A MJ0882; hypothetical protein, methanococcus jannaschii, structural genomics, BSGC structure funded by NIH; 1.80A {Methanocaldococcus jannaschii} SCOP: c.66.1.4

Probab=94.14  E-value=0.39  Score=38.22  Aligned_cols=101  Identities=16%  Similarity=0.247  Sum_probs=64.2

Q ss_pred             HHhcCCCCCCEEEEEcCCHHHHHHHHHHHHHCCCCeEEEEeCChhHHHHHHHc----CCCE--EEeCCCCcccHHHHHHH
Q 017868          174 CRRANIGPETNVLIMGAGPIGLVTMLGAPRAFGAPRIVIVDVDDYRLSVAKEI----GADN--IVKVSTNLQDIAEEVEK  247 (365)
Q Consensus       174 ~~~~~~~~g~~vlI~G~g~~G~~ai~~l~~~~g~~~vi~v~~~~~~~~~~~~~----g~~~--~~~~~~~~~~~~~~i~~  247 (365)
                      ++....+++++||-.|+|. |..+.. +++. +. .+++++.+++..+.+++.    +...  +.....+..+.   .  
T Consensus        45 ~~~~~~~~~~~vLdiG~G~-G~~~~~-~~~~-~~-~v~~~D~~~~~~~~a~~~~~~~~~~~~~~~~~~~d~~~~---~--  115 (194)
T 1dus_A           45 VENVVVDKDDDILDLGCGY-GVIGIA-LADE-VK-STTMADINRRAIKLAKENIKLNNLDNYDIRVVHSDLYEN---V--  115 (194)
T ss_dssp             HHHCCCCTTCEEEEETCTT-SHHHHH-HGGG-SS-EEEEEESCHHHHHHHHHHHHHTTCTTSCEEEEECSTTTT---C--
T ss_pred             HHHcccCCCCeEEEeCCCC-CHHHHH-HHHc-CC-eEEEEECCHHHHHHHHHHHHHcCCCccceEEEECchhcc---c--
Confidence            4556677899999998864 666667 6555 55 799999998877665542    4331  21111111111   1  


Q ss_pred             HHHHhCCCceEEEeCCCC-------HHHHHHHHHhcccCCEEEEEcc
Q 017868          248 IQKAMGTGIDVSFDCAGL-------NKTMSTALGATCAGGKVCLVGM  287 (365)
Q Consensus       248 ~~~~~~~~~d~vid~~g~-------~~~~~~~~~~l~~~G~~~~~g~  287 (365)
                          ....+|+|+....-       ...+..+.+.|+++|.+++...
T Consensus       116 ----~~~~~D~v~~~~~~~~~~~~~~~~l~~~~~~L~~gG~l~~~~~  158 (194)
T 1dus_A          116 ----KDRKYNKIITNPPIRAGKEVLHRIIEEGKELLKDNGEIWVVIQ  158 (194)
T ss_dssp             ----TTSCEEEEEECCCSTTCHHHHHHHHHHHHHHEEEEEEEEEEEE
T ss_pred             ----ccCCceEEEECCCcccchhHHHHHHHHHHHHcCCCCEEEEEEC
Confidence                13579999874321       2355677889999999988754

>2g76_A 3-PGDH, D-3-phosphoglycerate dehydrogenase; oxidoreductase, phosphoglycerate dehydrogenase deficiency, S metabolism, 2-hydroxyacid dehydrogenases; HET: NAD; 1.70A {Homo sapiens}

Probab=94.13  E-value=0.17  Score=44.87  Aligned_cols=89  Identities=18%  Similarity=0.163  Sum_probs=63.2

Q ss_pred             CCCEEEEEcCCHHHHHHHHHHHHHCCCCeEEEEeCChhHHHHHHHcCCCEEEeCCCCcccHHHHHHHHHHHhCCCceEEE
Q 017868          181 PETNVLIMGAGPIGLVTMLGAPRAFGAPRIVIVDVDDYRLSVAKEIGADNIVKVSTNLQDIAEEVEKIQKAMGTGIDVSF  260 (365)
Q Consensus       181 ~g~~vlI~G~g~~G~~ai~~l~~~~g~~~vi~v~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~i~~~~~~~~~~~d~vi  260 (365)
                      .|.+|.|.|.|.+|..+++ .++.+|+ .|++.+++.++ +.+.++|+..        .++.    +.    -...|+|+
T Consensus       164 ~g~tvgIIGlG~IG~~vA~-~l~~~G~-~V~~~d~~~~~-~~~~~~g~~~--------~~l~----el----l~~aDvV~  224 (335)
T 2g76_A          164 NGKTLGILGLGRIGREVAT-RMQSFGM-KTIGYDPIISP-EVSASFGVQQ--------LPLE----EI----WPLCDFIT  224 (335)
T ss_dssp             TTCEEEEECCSHHHHHHHH-HHHTTTC-EEEEECSSSCH-HHHHHTTCEE--------CCHH----HH----GGGCSEEE
T ss_pred             CcCEEEEEeECHHHHHHHH-HHHHCCC-EEEEECCCcch-hhhhhcCcee--------CCHH----HH----HhcCCEEE
Confidence            6789999999999999999 7788998 68888877655 3566777642        1222    22    24689999


Q ss_pred             eCCCCHH----HH-HHHHHhcccCCEEEEEccC
Q 017868          261 DCAGLNK----TM-STALGATCAGGKVCLVGMG  288 (365)
Q Consensus       261 d~~g~~~----~~-~~~~~~l~~~G~~~~~g~~  288 (365)
                      -++....    .+ ...+..+++++.++.++..
T Consensus       225 l~~P~t~~t~~li~~~~l~~mk~gailIN~arg  257 (335)
T 2g76_A          225 VHTPLLPSTTGLLNDNTFAQCKKGVRVVNCARG  257 (335)
T ss_dssp             ECCCCCTTTTTSBCHHHHTTSCTTEEEEECSCT
T ss_pred             EecCCCHHHHHhhCHHHHhhCCCCcEEEECCCc
Confidence            8776431    11 3567788888888887653

>3kux_A Putative oxidoreductase; oxidoreductase family, csgid, structural genomics, center FO structural genomics of infectious diseases; HET: MSE; 2.75A {Yersinia pestis}

Probab=94.13  E-value=0.25  Score=44.16  Aligned_cols=128  Identities=19%  Similarity=0.134  Sum_probs=75.4

Q ss_pred             CEEEEEcCCHHHHH-HHHHHHHHCCCCeEEEEeCChhHHHHHHHcCCCEEEeCCCCcccHHHHHHHHHHHhCCCceEEEe
Q 017868          183 TNVLIMGAGPIGLV-TMLGAPRAFGAPRIVIVDVDDYRLSVAKEIGADNIVKVSTNLQDIAEEVEKIQKAMGTGIDVSFD  261 (365)
Q Consensus       183 ~~vlI~G~g~~G~~-ai~~l~~~~g~~~vi~v~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~i~~~~~~~~~~~d~vid  261 (365)
                      -+|.|+|+|.+|.. .+..+.+.-+++.+.++++++++.+  ++++.....      .++.+.+    .  ...+|+|+.
T Consensus         8 ~rvgiiG~G~~g~~~~~~~~~~~~~~~l~av~d~~~~~~~--~~~~~~~~~------~~~~~ll----~--~~~vD~V~i   73 (352)
T 3kux_A            8 IKVGLLGYGYASKTFHAPLIMGTPGLELAGVSSSDASKVH--ADWPAIPVV------SDPQMLF----N--DPSIDLIVI   73 (352)
T ss_dssp             EEEEEECCSHHHHHTHHHHHHTSTTEEEEEEECSCHHHHH--TTCSSCCEE------SCHHHHH----H--CSSCCEEEE
T ss_pred             ceEEEECCCHHHHHHHHHHHhhCCCcEEEEEECCCHHHHH--hhCCCCceE------CCHHHHh----c--CCCCCEEEE
Confidence            47889999999985 6663444446755556677776655  333322221      2443333    2  457999999


Q ss_pred             CCCCHHHHHHHHHhcccCCEEEEEccCCCCccccchH-------hhhcCcEEEeec--ccCCcHHHHHHHHHcCCC
Q 017868          262 CAGLNKTMSTALGATCAGGKVCLVGMGHHEMTVPLTP-------AAVREVDVVGVF--RYKNTWPLCLELLRSGKI  328 (365)
Q Consensus       262 ~~g~~~~~~~~~~~l~~~G~~~~~g~~~~~~~~~~~~-------~~~~~~~i~~~~--~~~~~~~~~~~~l~~g~~  328 (365)
                      |+....+...+..+|..+ +-+++.-   +.......       .-.+++.+.-.+  .+...++.+.+++++|.+
T Consensus        74 ~tp~~~H~~~~~~al~aG-khV~~EK---Pla~~~~e~~~l~~~a~~~g~~~~v~~~~r~~p~~~~~~~~i~~g~i  145 (352)
T 3kux_A           74 PTPNDTHFPLAQSALAAG-KHVVVDK---PFTVTLSQANALKEHADDAGLLLSVFHNRRWDSDFLTLKTLLAEGSL  145 (352)
T ss_dssp             CSCTTTHHHHHHHHHHTT-CEEEECS---SCCSCHHHHHHHHHHHHHTTCCEEECCGGGGCHHHHHHHHHHHHTTT
T ss_pred             eCChHHHHHHHHHHHHCC-CcEEEEC---CCcCCHHHHHHHHHHHHHcCCeEEEEeecccCHHHHHHHHHHhcCCC
Confidence            998877888888888865 4444431   11111111       112233322222  235567888899998887

>3hdj_A Probable ornithine cyclodeaminase; APC62486, bordetella pertussis TOH structural genomics, PSI-2, protein structure initiative; 1.70A {Bordetella pertussis}

Probab=94.13  E-value=0.35  Score=42.44  Aligned_cols=95  Identities=17%  Similarity=0.138  Sum_probs=62.8

Q ss_pred             CCCCEEEEEcCCHHHHHHHHHHHHHCCCCeEEEEeCChhHHHHHHH----cCCCEEEeCCCCcccHHHHHHHHHHHhCCC
Q 017868          180 GPETNVLIMGAGPIGLVTMLGAPRAFGAPRIVIVDVDDYRLSVAKE----IGADNIVKVSTNLQDIAEEVEKIQKAMGTG  255 (365)
Q Consensus       180 ~~g~~vlI~G~g~~G~~ai~~l~~~~g~~~vi~v~~~~~~~~~~~~----~g~~~~~~~~~~~~~~~~~i~~~~~~~~~~  255 (365)
                      +...+++|.|+|.+|...+..++...+.+.|.+.+++ +..+++++    +|..... .     ++.+.+        ..
T Consensus       119 ~~~~~v~iIGaG~~a~~~~~al~~~~~~~~V~v~~r~-~a~~la~~l~~~~g~~~~~-~-----~~~eav--------~~  183 (313)
T 3hdj_A          119 PRSSVLGLFGAGTQGAEHAAQLSARFALEAILVHDPY-ASPEILERIGRRCGVPARM-A-----APADIA--------AQ  183 (313)
T ss_dssp             TTCCEEEEECCSHHHHHHHHHHHHHSCCCEEEEECTT-CCHHHHHHHHHHHTSCEEE-C-----CHHHHH--------HH
T ss_pred             CCCcEEEEECccHHHHHHHHHHHHhCCCcEEEEECCc-HHHHHHHHHHHhcCCeEEE-e-----CHHHHH--------hh
Confidence            4567899999999999888856555678888888887 44455544    4654221 1     222222        35


Q ss_pred             ceEEEeCCCCHHHHHHHHHhcccCCEEEEEccCCC
Q 017868          256 IDVSFDCAGLNKTMSTALGATCAGGKVCLVGMGHH  290 (365)
Q Consensus       256 ~d~vid~~g~~~~~~~~~~~l~~~G~~~~~g~~~~  290 (365)
                      +|+|+.|+.....+ .....++++-+++.+|....
T Consensus       184 aDIVi~aT~s~~pv-l~~~~l~~G~~V~~vGs~~p  217 (313)
T 3hdj_A          184 ADIVVTATRSTTPL-FAGQALRAGAFVGAIGSSLP  217 (313)
T ss_dssp             CSEEEECCCCSSCS-SCGGGCCTTCEEEECCCSST
T ss_pred             CCEEEEccCCCCcc-cCHHHcCCCcEEEECCCCCC
Confidence            89999998754211 11246888888888886543

>3iv6_A Putative Zn-dependent alcohol dehydrogenase; alpha/beta fold, rossmann-fold, structural genomics, PSI-2, structure initiative; HET: SAM; 2.70A {Rhodobacter sphaeroides}

Probab=94.10  E-value=0.35  Score=41.23  Aligned_cols=100  Identities=18%  Similarity=0.188  Sum_probs=63.1

Q ss_pred             HHhcCCCCCCEEEEEcCCHHHHHHHHHHHHHCCCCeEEEEeCChhHHHHHHHcCCCE--EEeCCCCcccHHHHHHHHHHH
Q 017868          174 CRRANIGPETNVLIMGAGPIGLVTMLGAPRAFGAPRIVIVDVDDYRLSVAKEIGADN--IVKVSTNLQDIAEEVEKIQKA  251 (365)
Q Consensus       174 ~~~~~~~~g~~vlI~G~g~~G~~ai~~l~~~~g~~~vi~v~~~~~~~~~~~~~g~~~--~~~~~~~~~~~~~~i~~~~~~  251 (365)
                      +....+.++.+||=.|+|. |..++. +++. |+ .|++++.+++-.+.+++.-...  ..++........   .    .
T Consensus        38 l~~l~l~~g~~VLDlGcGt-G~~a~~-La~~-g~-~V~gvD~S~~ml~~Ar~~~~~~~v~~~~~~~~~~~~---~----~  106 (261)
T 3iv6_A           38 IFLENIVPGSTVAVIGAST-RFLIEK-ALER-GA-SVTVFDFSQRMCDDLAEALADRCVTIDLLDITAEIP---K----E  106 (261)
T ss_dssp             HHTTTCCTTCEEEEECTTC-HHHHHH-HHHT-TC-EEEEEESCHHHHHHHHHHTSSSCCEEEECCTTSCCC---G----G
T ss_pred             HHhcCCCCcCEEEEEeCcc-hHHHHH-HHhc-CC-EEEEEECCHHHHHHHHHHHHhccceeeeeecccccc---c----c
Confidence            4556788999999999864 777777 6654 76 7999999999888886643221  111111110000   0    0


Q ss_pred             hCCCceEEEeCCC-----C---HHHHHHHHHhcccCCEEEEE
Q 017868          252 MGTGIDVSFDCAG-----L---NKTMSTALGATCAGGKVCLV  285 (365)
Q Consensus       252 ~~~~~d~vid~~g-----~---~~~~~~~~~~l~~~G~~~~~  285 (365)
                      ....+|+|+....     .   ...+....++| |+|++++.
T Consensus       107 ~~~~fD~Vv~~~~l~~~~~~~~~~~l~~l~~lL-PGG~l~lS  147 (261)
T 3iv6_A          107 LAGHFDFVLNDRLINRFTTEEARRACLGMLSLV-GSGTVRAS  147 (261)
T ss_dssp             GTTCCSEEEEESCGGGSCHHHHHHHHHHHHHHH-TTSEEEEE
T ss_pred             cCCCccEEEEhhhhHhCCHHHHHHHHHHHHHhC-cCcEEEEE
Confidence            1468999987432     1   12455667788 99998754

>3id6_C Fibrillarin-like rRNA/TRNA 2'-O-methyltransferase; C/D guide RNA, 2'-O-methylation, coiled-coil, methyltransfer binding, rRNA processing; HET: SAM; 2.60A {Sulfolobus solfataricus} SCOP: c.66.1.0 PDB: 3id5_B* 3pla_E*

Probab=94.09  E-value=0.36  Score=40.38  Aligned_cols=100  Identities=16%  Similarity=0.083  Sum_probs=56.1

Q ss_pred             cCCCCCCEEEEEcCCHHHHHHHHHHHHHCC-CCeEEEEeCChhHHH----HHHHcCCCEEEeCCCCcccHHHHHHHHHHH
Q 017868          177 ANIGPETNVLIMGAGPIGLVTMLGAPRAFG-APRIVIVDVDDYRLS----VAKEIGADNIVKVSTNLQDIAEEVEKIQKA  251 (365)
Q Consensus       177 ~~~~~g~~vlI~G~g~~G~~ai~~l~~~~g-~~~vi~v~~~~~~~~----~~~~~g~~~~~~~~~~~~~~~~~i~~~~~~  251 (365)
                      ..+++|++||=.|+|+ |..+.. ++...| ...|++++.++...+    .+++..-...+..+......   ...    
T Consensus        72 ~~l~~g~~VLDlG~Gt-G~~t~~-la~~v~~~G~V~avD~s~~~l~~l~~~a~~r~nv~~i~~Da~~~~~---~~~----  142 (232)
T 3id6_C           72 NPIRKGTKVLYLGAAS-GTTISH-VSDIIELNGKAYGVEFSPRVVRELLLVAQRRPNIFPLLADARFPQS---YKS----  142 (232)
T ss_dssp             CSCCTTCEEEEETCTT-SHHHHH-HHHHHTTTSEEEEEECCHHHHHHHHHHHHHCTTEEEEECCTTCGGG---TTT----
T ss_pred             cCCCCCCEEEEEeecC-CHHHHH-HHHHhCCCCEEEEEECcHHHHHHHHHHhhhcCCeEEEEcccccchh---hhc----
Confidence            5689999999998754 444555 554444 337999999987642    33333211222211111110   000    


Q ss_pred             hCCCceEEEeCCCCHH---HHH-HHHHhcccCCEEEEE
Q 017868          252 MGTGIDVSFDCAGLNK---TMS-TALGATCAGGKVCLV  285 (365)
Q Consensus       252 ~~~~~d~vid~~g~~~---~~~-~~~~~l~~~G~~~~~  285 (365)
                      ....+|+|+-....+.   .+. .+.+.|+++|+++..
T Consensus       143 ~~~~~D~I~~d~a~~~~~~il~~~~~~~LkpGG~lvis  180 (232)
T 3id6_C          143 VVENVDVLYVDIAQPDQTDIAIYNAKFFLKVNGDMLLV  180 (232)
T ss_dssp             TCCCEEEEEECCCCTTHHHHHHHHHHHHEEEEEEEEEE
T ss_pred             cccceEEEEecCCChhHHHHHHHHHHHhCCCCeEEEEE
Confidence            1357999986544322   222 333489999999875

>1fjh_A 3alpha-hydroxysteroid dehydrogenase/carbonyl reductase; short chain dehydrogenase, SDR, xenobiotic, metyrapone, oligomerisation; 1.68A {Comamonas testosteroni} SCOP: c.2.1.2 PDB: 1fk8_A*

Probab=94.07  E-value=0.13  Score=43.47  Aligned_cols=70  Identities=29%  Similarity=0.376  Sum_probs=41.1

Q ss_pred             CEEEEEcC-CHHHHHHHHHHHHHCCCCeEEEEeCChhHHHHHHHcCCCEEEeCCCCcccHHHHHHHHHHHhCCCceEEEe
Q 017868          183 TNVLIMGA-GPIGLVTMLGAPRAFGAPRIVIVDVDDYRLSVAKEIGADNIVKVSTNLQDIAEEVEKIQKAMGTGIDVSFD  261 (365)
Q Consensus       183 ~~vlI~G~-g~~G~~ai~~l~~~~g~~~vi~v~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~i~~~~~~~~~~~d~vid  261 (365)
                      .++||+|+ |++|.++++.++ ..|+ .|+.+++++++.+.      .    +..+-.+ .+.++++.+...+++|++|.
T Consensus         2 k~vlVTGas~gIG~~~a~~l~-~~G~-~V~~~~r~~~~~~~------~----~~~Dl~~-~~~v~~~~~~~~~~id~lv~   68 (257)
T 1fjh_A            2 SIIVISGCATGIGAATRKVLE-AAGH-QIVGIDIRDAEVIA------D----LSTAEGR-KQAIADVLAKCSKGMDGLVL   68 (257)
T ss_dssp             CEEEEETTTSHHHHHHHHHHH-HTTC-EEEEEESSSSSEEC------C----TTSHHHH-HHHHHHHHTTCTTCCSEEEE
T ss_pred             CEEEEeCCCCHHHHHHHHHHH-HCCC-EEEEEeCCchhhcc------c----cccCCCC-HHHHHHHHHHhCCCCCEEEE
Confidence            36899987 999999999554 5698 57777666543211      0    1111011 12333333211257899999


Q ss_pred             CCCC
Q 017868          262 CAGL  265 (365)
Q Consensus       262 ~~g~  265 (365)
                      ++|.
T Consensus        69 ~Ag~   72 (257)
T 1fjh_A           69 CAGL   72 (257)
T ss_dssp             CCCC
T ss_pred             CCCC
Confidence            8874

>3gdo_A Uncharacterized oxidoreductase YVAA; structural genomics, putative oxidoreductase YVAA, oxidoredu PSI-2, protein structure initiative; 2.03A {Bacillus subtilis subsp} PDB: 3gfg_A

Probab=94.07  E-value=0.25  Score=44.29  Aligned_cols=128  Identities=16%  Similarity=0.148  Sum_probs=75.7

Q ss_pred             CEEEEEcCCHHHHH-HHHHHHHHCCCCeEEEEeCChhHHHHHHHcCCCEEEeCCCCcccHHHHHHHHHHHhCCCceEEEe
Q 017868          183 TNVLIMGAGPIGLV-TMLGAPRAFGAPRIVIVDVDDYRLSVAKEIGADNIVKVSTNLQDIAEEVEKIQKAMGTGIDVSFD  261 (365)
Q Consensus       183 ~~vlI~G~g~~G~~-ai~~l~~~~g~~~vi~v~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~i~~~~~~~~~~~d~vid  261 (365)
                      -+|.|+|+|.+|.. .+..+.+.-+++.+.++++++++  ..++++.....      .++.+.+.      ...+|+|+.
T Consensus         6 ~rvgiiG~G~~g~~~~~~~l~~~~~~~l~av~d~~~~~--~~~~~~~~~~~------~~~~~ll~------~~~vD~V~i   71 (358)
T 3gdo_A            6 IKVGILGYGLSGSVFHGPLLDVLDEYQISKIMTSRTEE--VKRDFPDAEVV------HELEEITN------DPAIELVIV   71 (358)
T ss_dssp             EEEEEECCSHHHHHTTHHHHTTCTTEEEEEEECSCHHH--HHHHCTTSEEE------SSTHHHHT------CTTCCEEEE
T ss_pred             ceEEEEccCHHHHHHHHHHHhhCCCeEEEEEEcCCHHH--HHhhCCCCceE------CCHHHHhc------CCCCCEEEE
Confidence            36889999999984 56634444467555555666655  45666543332      23333331      357999999


Q ss_pred             CCCCHHHHHHHHHhcccCCEEEEEccCCCCccccch---H----hhhcCcEEE-ee-cccCCcHHHHHHHHHcCCC
Q 017868          262 CAGLNKTMSTALGATCAGGKVCLVGMGHHEMTVPLT---P----AAVREVDVV-GV-FRYKNTWPLCLELLRSGKI  328 (365)
Q Consensus       262 ~~g~~~~~~~~~~~l~~~G~~~~~g~~~~~~~~~~~---~----~~~~~~~i~-~~-~~~~~~~~~~~~~l~~g~~  328 (365)
                      |+....+...+..+|..+=+ +++.   .+......   .    .-.+++.+. +. ..+...++.+.+++++|.+
T Consensus        72 ~tp~~~H~~~~~~al~aGkh-Vl~E---KPla~~~~e~~~l~~~a~~~g~~~~v~~~~r~~p~~~~~k~~i~~g~i  143 (358)
T 3gdo_A           72 TTPSGLHYEHTMACIQAGKH-VVME---KPMTATAEEGETLKRAADEKGVLLSVYHNRRWDNDFLTIKKLISEGSL  143 (358)
T ss_dssp             CSCTTTHHHHHHHHHHTTCE-EEEE---SSCCSSHHHHHHHHHHHHHHTCCEEEECGGGGSHHHHHHHHHHHTTSS
T ss_pred             cCCcHHHHHHHHHHHHcCCe-EEEe---cCCcCCHHHHHHHHHHHHHcCCeEEEeeecccCHHHHHHHHHHhcCCC
Confidence            99987788888888886644 4442   11111111   1    112233222 22 2335668888999999887

>3g07_A 7SK snRNA methylphosphate capping enzyme; structural genomics consortium (SGC), methyltransferase, phosphoprotein, S-adenosyl-L-methionine; HET: SAM; 2.65A {Homo sapiens}

Probab=94.06  E-value=0.12  Score=44.94  Aligned_cols=45  Identities=24%  Similarity=0.351  Sum_probs=35.0

Q ss_pred             CCCCEEEEEcCCHHHHHHHHHHHHHCCCCeEEEEeCChhHHHHHHHc
Q 017868          180 GPETNVLIMGAGPIGLVTMLGAPRAFGAPRIVIVDVDDYRLSVAKEI  226 (365)
Q Consensus       180 ~~g~~vlI~G~g~~G~~ai~~l~~~~g~~~vi~v~~~~~~~~~~~~~  226 (365)
                      .++.+||=+|+|. |..++. +++..+...|+++|.++.-.+.+++.
T Consensus        45 ~~~~~VLDiGCG~-G~~~~~-la~~~~~~~v~gvDis~~~i~~A~~~   89 (292)
T 3g07_A           45 FRGRDVLDLGCNV-GHLTLS-IACKWGPSRMVGLDIDSRLIHSARQN   89 (292)
T ss_dssp             TTTSEEEEESCTT-CHHHHH-HHHHTCCSEEEEEESCHHHHHHHHHT
T ss_pred             cCCCcEEEeCCCC-CHHHHH-HHHHcCCCEEEEECCCHHHHHHHHHH
Confidence            4678999999864 677777 77777666899999999877777653

>3mz0_A Inositol 2-dehydrogenase/D-chiro-inositol 3-dehyd; MYO-inositol dehydrogenase, bsidh, oxidoreductase; HET: MSE PGE; 1.54A {Bacillus subtilis} PDB: 3nt2_A* 3nt4_A* 3nt5_A* 3nto_A* 3ntq_A* 3ntr_A*

Probab=94.04  E-value=0.48  Score=42.11  Aligned_cols=129  Identities=16%  Similarity=0.166  Sum_probs=79.3

Q ss_pred             EEEEEcCCHHHHHHHHHHH-HHCCCCeEEEEeCChhHHH-HHHHcCC-CEEEeCCCCcccHHHHHHHHHHHhCCCceEEE
Q 017868          184 NVLIMGAGPIGLVTMLGAP-RAFGAPRIVIVDVDDYRLS-VAKEIGA-DNIVKVSTNLQDIAEEVEKIQKAMGTGIDVSF  260 (365)
Q Consensus       184 ~vlI~G~g~~G~~ai~~l~-~~~g~~~vi~v~~~~~~~~-~~~~~g~-~~~~~~~~~~~~~~~~i~~~~~~~~~~~d~vi  260 (365)
                      +|.|+|+|.+|...+..+. +..+++.+.+.++++++.+ +++++|. ....      .++.+.+.      ...+|+|+
T Consensus         4 rigiIG~G~~g~~~~~~l~~~~~~~~l~av~d~~~~~~~~~~~~~g~~~~~~------~~~~~ll~------~~~~D~V~   71 (344)
T 3mz0_A            4 RIGVIGTGAIGKEHINRITNKLSGAEIVAVTDVNQEAAQKVVEQYQLNATVY------PNDDSLLA------DENVDAVL   71 (344)
T ss_dssp             EEEEECCSHHHHHHHHHHHHTCSSEEEEEEECSSHHHHHHHHHHTTCCCEEE------SSHHHHHH------CTTCCEEE
T ss_pred             EEEEECccHHHHHHHHHHHhhCCCcEEEEEEcCCHHHHHHHHHHhCCCCeee------CCHHHHhc------CCCCCEEE
Confidence            6889999999998888454 3356755556677777765 5577884 2322      23433332      35799999


Q ss_pred             eCCCCHHHHHHHHHhcccCCEEEEEccCCCCccccchH-------hhhcCcEE--Eee-cccCCcHHHHHHHHHcCCC
Q 017868          261 DCAGLNKTMSTALGATCAGGKVCLVGMGHHEMTVPLTP-------AAVREVDV--VGV-FRYKNTWPLCLELLRSGKI  328 (365)
Q Consensus       261 d~~g~~~~~~~~~~~l~~~G~~~~~g~~~~~~~~~~~~-------~~~~~~~i--~~~-~~~~~~~~~~~~~l~~g~~  328 (365)
                      .|+....+.+.+..++..+-+ +++.   .+.......       .-.++..+  .+. ..+...++.+.+++++|.+
T Consensus        72 i~tp~~~h~~~~~~al~~Gk~-vl~E---KP~a~~~~e~~~l~~~a~~~g~~~~~v~~~~r~~p~~~~~k~~i~~g~i  145 (344)
T 3mz0_A           72 VTSWGPAHESSVLKAIKAQKY-VFCE---KPLATTAEGCMRIVEEEIKVGKRLVQVGFMRRYDSGYVQLKEALDNHVI  145 (344)
T ss_dssp             ECSCGGGHHHHHHHHHHTTCE-EEEC---SCSCSSHHHHHHHHHHHHHHSSCCEEECCGGGGSHHHHHHHHHHHTTTT
T ss_pred             ECCCchhHHHHHHHHHHCCCc-EEEc---CCCCCCHHHHHHHHHHHHHHCCEEEEEecccccCHHHHHHHHHHHcCCC
Confidence            999887787788888876544 4442   111111111       12233322  222 2336678888899999887

>3sm3_A SAM-dependent methyltransferases; NESG, structural genomics, PSI-biology, protein structure in northeast structural genomics; 2.20A {Methanosarcina mazei}

Probab=93.96  E-value=0.51  Score=38.96  Aligned_cols=95  Identities=14%  Similarity=0.238  Sum_probs=62.8

Q ss_pred             CCCCCEEEEEcCCHHHHHHHHHHHHHCCCCeEEEEeCChhHHHHHHHcCCC-----------EEEeCCCCcccHHHHHHH
Q 017868          179 IGPETNVLIMGAGPIGLVTMLGAPRAFGAPRIVIVDVDDYRLSVAKEIGAD-----------NIVKVSTNLQDIAEEVEK  247 (365)
Q Consensus       179 ~~~g~~vlI~G~g~~G~~ai~~l~~~~g~~~vi~v~~~~~~~~~~~~~g~~-----------~~~~~~~~~~~~~~~i~~  247 (365)
                      ++++.+||-.|+|. |..+.. +++. +. .+++++.++...+.+++.-..           ..+.  .+..++.     
T Consensus        28 ~~~~~~vLdiG~G~-G~~~~~-l~~~-~~-~v~~vD~s~~~~~~a~~~~~~~~~~~~~~~~~~~~~--~d~~~~~-----   96 (235)
T 3sm3_A           28 LQEDDEILDIGCGS-GKISLE-LASK-GY-SVTGIDINSEAIRLAETAARSPGLNQKTGGKAEFKV--ENASSLS-----   96 (235)
T ss_dssp             CCTTCEEEEETCTT-SHHHHH-HHHT-TC-EEEEEESCHHHHHHHHHHTTCCSCCSSSSCEEEEEE--CCTTSCC-----
T ss_pred             CCCCCeEEEECCCC-CHHHHH-HHhC-CC-eEEEEECCHHHHHHHHHHHHhcCCccccCcceEEEE--ecccccC-----
Confidence            56889999998864 666666 6555 77 799999999988887663211           1222  1111110     


Q ss_pred             HHHHhCCCceEEEeCCC-----CH----HHHHHHHHhcccCCEEEEEcc
Q 017868          248 IQKAMGTGIDVSFDCAG-----LN----KTMSTALGATCAGGKVCLVGM  287 (365)
Q Consensus       248 ~~~~~~~~~d~vid~~g-----~~----~~~~~~~~~l~~~G~~~~~g~  287 (365)
                         .....+|+|+....     ..    ..+..+.+.|+++|.+++...
T Consensus        97 ---~~~~~~D~v~~~~~l~~~~~~~~~~~~l~~~~~~L~pgG~l~~~~~  142 (235)
T 3sm3_A           97 ---FHDSSFDFAVMQAFLTSVPDPKERSRIIKEVFRVLKPGAYLYLVEF  142 (235)
T ss_dssp             ---SCTTCEEEEEEESCGGGCCCHHHHHHHHHHHHHHEEEEEEEEEEEE
T ss_pred             ---CCCCceeEEEEcchhhcCCCHHHHHHHHHHHHHHcCCCeEEEEEEC
Confidence               01467999986321     22    467788899999999988754

>1uzm_A 3-oxoacyl-[acyl-carrier protein] reductase; beta-ketoacyl reductase, oxidoreductase; 1.49A {Mycobacterium tuberculosis} SCOP: c.2.1.2 PDB: 1uzn_A* 2ntn_A 1uzl_A

Probab=93.96  E-value=0.058  Score=45.66  Aligned_cols=77  Identities=21%  Similarity=0.244  Sum_probs=45.9

Q ss_pred             CCCEEEEEcC-CHHHHHHHHHHHHHCCCCeEEEEeCChhHHHHHHHcCCCEEEeCCCCcccHHHHHHHHHHHhCCCceEE
Q 017868          181 PETNVLIMGA-GPIGLVTMLGAPRAFGAPRIVIVDVDDYRLSVAKEIGADNIVKVSTNLQDIAEEVEKIQKAMGTGIDVS  259 (365)
Q Consensus       181 ~g~~vlI~G~-g~~G~~ai~~l~~~~g~~~vi~v~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~i~~~~~~~~~~~d~v  259 (365)
                      .+.++||+|+ |++|.++++.++ ..|+ .|+.+++++++.+.+.  +  ...++ .+.+++.+.+++..+. .+++|++
T Consensus        14 ~~k~vlVTGas~gIG~~ia~~l~-~~G~-~V~~~~r~~~~~~~~~--~--~~~D~-~~~~~~~~~~~~~~~~-~g~id~l   85 (247)
T 1uzm_A           14 VSRSVLVTGGNRGIGLAIAQRLA-ADGH-KVAVTHRGSGAPKGLF--G--VEVDV-TDSDAVDRAFTAVEEH-QGPVEVL   85 (247)
T ss_dssp             CCCEEEETTTTSHHHHHHHHHHH-HTTC-EEEEEESSSCCCTTSE--E--EECCT-TCHHHHHHHHHHHHHH-HSSCSEE
T ss_pred             CCCEEEEeCCCCHHHHHHHHHHH-HCCC-EEEEEeCChHHHHHhc--C--eeccC-CCHHHHHHHHHHHHHH-cCCCCEE
Confidence            4678999987 999999999554 5698 5677766654432111  1  11222 1223333344443332 2579999


Q ss_pred             EeCCCC
Q 017868          260 FDCAGL  265 (365)
Q Consensus       260 id~~g~  265 (365)
                      |.++|.
T Consensus        86 v~~Ag~   91 (247)
T 1uzm_A           86 VSNAGL   91 (247)
T ss_dssp             EEECSC
T ss_pred             EECCCC
Confidence            998873

>4e12_A Diketoreductase; oxidoreductase, NADH; HET: 1PE; 1.93A {Acinetobacter baylyi} PDB: 4dyd_A* 4e13_A*

Probab=93.94  E-value=0.65  Score=40.03  Aligned_cols=41  Identities=27%  Similarity=0.429  Sum_probs=33.0

Q ss_pred             CEEEEEcCCHHHHHHHHHHHHHCCCCeEEEEeCChhHHHHHHH
Q 017868          183 TNVLIMGAGPIGLVTMLGAPRAFGAPRIVIVDVDDYRLSVAKE  225 (365)
Q Consensus       183 ~~vlI~G~g~~G~~ai~~l~~~~g~~~vi~v~~~~~~~~~~~~  225 (365)
                      .+|.|+|+|.+|..+++ .+...|+ .|+..++++++.+.+.+
T Consensus         5 ~kV~VIGaG~mG~~iA~-~la~~G~-~V~l~d~~~~~~~~~~~   45 (283)
T 4e12_A            5 TNVTVLGTGVLGSQIAF-QTAFHGF-AVTAYDINTDALDAAKK   45 (283)
T ss_dssp             CEEEEECCSHHHHHHHH-HHHHTTC-EEEEECSSHHHHHHHHH
T ss_pred             CEEEEECCCHHHHHHHH-HHHhCCC-eEEEEeCCHHHHHHHHH
Confidence            58999999999999999 5556698 68888999887765543

>4gek_A TRNA (CMO5U34)-methyltransferase; structural genomics, PSI-biology, NEW YORK structural genomi research consortium, nysgrc, rossmann fold; HET: GEK; 1.50A {Escherichia coli} PDB: 1im8_A*

Probab=93.93  E-value=0.51  Score=40.23  Aligned_cols=95  Identities=16%  Similarity=0.228  Sum_probs=60.8

Q ss_pred             CCCCCEEEEEcCCHHHHHHHHHHHHHC---CCCeEEEEeCChhHHHHHHH----cCCCE-EEeCCCCcccHHHHHHHHHH
Q 017868          179 IGPETNVLIMGAGPIGLVTMLGAPRAF---GAPRIVIVDVDDYRLSVAKE----IGADN-IVKVSTNLQDIAEEVEKIQK  250 (365)
Q Consensus       179 ~~~g~~vlI~G~g~~G~~ai~~l~~~~---g~~~vi~v~~~~~~~~~~~~----~g~~~-~~~~~~~~~~~~~~i~~~~~  250 (365)
                      +++|.+||=.|+|. |..+.. +++..   |+ .|++++.+++-.+.+++    .+... +-....+..++         
T Consensus        68 ~~~~~~vLDlGcGt-G~~~~~-la~~~~~~~~-~v~gvD~s~~ml~~A~~~~~~~~~~~~v~~~~~D~~~~---------  135 (261)
T 4gek_A           68 VQPGTQVYDLGCSL-GAATLS-VRRNIHHDNC-KIIAIDNSPAMIERCRRHIDAYKAPTPVDVIEGDIRDI---------  135 (261)
T ss_dssp             CCTTCEEEEETCTT-THHHHH-HHHTCCSSSC-EEEEEESCHHHHHHHHHHHHTSCCSSCEEEEESCTTTC---------
T ss_pred             CCCCCEEEEEeCCC-CHHHHH-HHHhcCCCCC-EEEEEECCHHHHHHHHHHHHhhccCceEEEeecccccc---------
Confidence            78999999999864 666666 66554   45 79999999987776644    34321 11111111111         


Q ss_pred             HhCCCceEEEeCCC-----C---HHHHHHHHHhcccCCEEEEEc
Q 017868          251 AMGTGIDVSFDCAG-----L---NKTMSTALGATCAGGKVCLVG  286 (365)
Q Consensus       251 ~~~~~~d~vid~~g-----~---~~~~~~~~~~l~~~G~~~~~g  286 (365)
                       .-..+|+|+....     .   ...+..+.+.|+|||.+++..
T Consensus       136 -~~~~~d~v~~~~~l~~~~~~~~~~~l~~i~~~LkpGG~lii~e  178 (261)
T 4gek_A          136 -AIENASMVVLNFTLQFLEPSERQALLDKIYQGLNPGGALVLSE  178 (261)
T ss_dssp             -CCCSEEEEEEESCGGGSCHHHHHHHHHHHHHHEEEEEEEEEEE
T ss_pred             -cccccccceeeeeeeecCchhHhHHHHHHHHHcCCCcEEEEEe
Confidence             1346888876432     1   135678899999999998764

>3uxy_A Short-chain dehydrogenase/reductase SDR; structural genomics, PSI-biology, NEW YORK structural genomi research consortium, nysgrc; HET: NAD; 2.10A {Rhodobacter sphaeroides}

Probab=93.92  E-value=0.17  Score=43.27  Aligned_cols=75  Identities=20%  Similarity=0.197  Sum_probs=44.6

Q ss_pred             CCCEEEEEcC-CHHHHHHHHHHHHHCCCCeEEEEeCChhHHHHHHHcCCCEEEeCCC-CcccHHHHHHHHHHHhCCCceE
Q 017868          181 PETNVLIMGA-GPIGLVTMLGAPRAFGAPRIVIVDVDDYRLSVAKEIGADNIVKVST-NLQDIAEEVEKIQKAMGTGIDV  258 (365)
Q Consensus       181 ~g~~vlI~G~-g~~G~~ai~~l~~~~g~~~vi~v~~~~~~~~~~~~~g~~~~~~~~~-~~~~~~~~i~~~~~~~~~~~d~  258 (365)
                      .|.++||+|+ +++|.++++.++ ..|+ +|+.++++.++.+.      ...+..+- +..+....++++.+. -+++|+
T Consensus        27 ~gk~vlVTGas~gIG~aia~~la-~~G~-~V~~~~r~~~~~~~------~~~~~~Dv~~~~~~~~~~~~~~~~-~g~iD~   97 (266)
T 3uxy_A           27 EGKVALVTGAAGGIGGAVVTALR-AAGA-RVAVADRAVAGIAA------DLHLPGDLREAAYADGLPGAVAAG-LGRLDI   97 (266)
T ss_dssp             TTCEEEESSTTSHHHHHHHHHHH-HTTC-EEEECSSCCTTSCC------SEECCCCTTSHHHHHHHHHHHHHH-HSCCCE
T ss_pred             CCCEEEEeCCCcHHHHHHHHHHH-HCCC-EEEEEeCCHHHHHh------hhccCcCCCCHHHHHHHHHHHHHh-cCCCCE
Confidence            5788999987 999999999555 5599 57777766544221      11111111 112222233333322 257999


Q ss_pred             EEeCCC
Q 017868          259 SFDCAG  264 (365)
Q Consensus       259 vid~~g  264 (365)
                      +|.++|
T Consensus        98 lvnnAg  103 (266)
T 3uxy_A           98 VVNNAG  103 (266)
T ss_dssp             EEECCC
T ss_pred             EEECCC
Confidence            999888

>3ruf_A WBGU; rossmann fold, UDP-hexose 4-epimerase, isomerase; HET: NAD UDP; 2.00A {Plesiomonas shigelloides} SCOP: c.2.1.2 PDB: 3ru9_A* 3rud_A* 3rue_A* 3rua_A* 3ruh_A* 3ruc_A* 3ru7_A* 3lu1_A*

Probab=93.92  E-value=0.44  Score=42.30  Aligned_cols=76  Identities=21%  Similarity=0.268  Sum_probs=45.2

Q ss_pred             CCCEEEEEcC-CHHHHHHHHHHHHHCCCCeEEEEeCCh----hHHHHHHHc------CCCEEEeCCCCcccHHHHHHHHH
Q 017868          181 PETNVLIMGA-GPIGLVTMLGAPRAFGAPRIVIVDVDD----YRLSVAKEI------GADNIVKVSTNLQDIAEEVEKIQ  249 (365)
Q Consensus       181 ~g~~vlI~G~-g~~G~~ai~~l~~~~g~~~vi~v~~~~----~~~~~~~~~------g~~~~~~~~~~~~~~~~~i~~~~  249 (365)
                      .+.+|||+|+ |.+|..+++ .+...|. .|++++++.    +..+.++..      .-...+..+-  .+. +.+.+. 
T Consensus        24 ~~~~vlVtGatG~iG~~l~~-~L~~~g~-~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~~~~~Dl--~d~-~~~~~~-   97 (351)
T 3ruf_A           24 SPKTWLITGVAGFIGSNLLE-KLLKLNQ-VVIGLDNFSTGHQYNLDEVKTLVSTEQWSRFCFIEGDI--RDL-TTCEQV-   97 (351)
T ss_dssp             SCCEEEEETTTSHHHHHHHH-HHHHTTC-EEEEEECCSSCCHHHHHHHHHTSCHHHHTTEEEEECCT--TCH-HHHHHH-
T ss_pred             CCCeEEEECCCcHHHHHHHH-HHHHCCC-EEEEEeCCCCCchhhhhhhhhccccccCCceEEEEccC--CCH-HHHHHH-
Confidence            3579999997 999999999 4455688 566666643    233333332      2222333222  222 233333 


Q ss_pred             HHhCCCceEEEeCCCC
Q 017868          250 KAMGTGIDVSFDCAGL  265 (365)
Q Consensus       250 ~~~~~~~d~vid~~g~  265 (365)
                         -.++|+||.+++.
T Consensus        98 ---~~~~d~Vih~A~~  110 (351)
T 3ruf_A           98 ---MKGVDHVLHQAAL  110 (351)
T ss_dssp             ---TTTCSEEEECCCC
T ss_pred             ---hcCCCEEEECCcc
Confidence               2489999999884

>1qyc_A Phenylcoumaran benzylic ether reductase PT1; NADPH-dependent aromatic alcohol reductases, pcber, PLR, IFR, lignans, isoflavonoids, plant protein; 2.20A {Pinus taeda} SCOP: c.2.1.2

Probab=93.90  E-value=0.15  Score=44.42  Aligned_cols=74  Identities=23%  Similarity=0.375  Sum_probs=44.3

Q ss_pred             CCEEEEEcC-CHHHHHHHHHHHHHCCCCeEEEEeCC------hhHHHHHHH---cCCCEEEeCCCCcccHHHHHHHHHHH
Q 017868          182 ETNVLIMGA-GPIGLVTMLGAPRAFGAPRIVIVDVD------DYRLSVAKE---IGADNIVKVSTNLQDIAEEVEKIQKA  251 (365)
Q Consensus       182 g~~vlI~G~-g~~G~~ai~~l~~~~g~~~vi~v~~~------~~~~~~~~~---~g~~~~~~~~~~~~~~~~~i~~~~~~  251 (365)
                      ..+|||+|+ |.+|..++..+ ...|.+ |++++++      +++.+.++.   .++. ++..+-  .+. +.+.+..  
T Consensus         4 ~~~ilVtGatG~iG~~l~~~L-~~~g~~-V~~l~R~~~~~~~~~~~~~~~~l~~~~v~-~v~~D~--~d~-~~l~~~~--   75 (308)
T 1qyc_A            4 RSRILLIGATGYIGRHVAKAS-LDLGHP-TFLLVRESTASSNSEKAQLLESFKASGAN-IVHGSI--DDH-ASLVEAV--   75 (308)
T ss_dssp             CCCEEEESTTSTTHHHHHHHH-HHTTCC-EEEECCCCCTTTTHHHHHHHHHHHTTTCE-EECCCT--TCH-HHHHHHH--
T ss_pred             CCEEEEEcCCcHHHHHHHHHH-HhCCCC-EEEEECCcccccCHHHHHHHHHHHhCCCE-EEEecc--CCH-HHHHHHH--
Confidence            457999997 99999999944 456874 5666665      334433332   3443 222222  222 2344333  


Q ss_pred             hCCCceEEEeCCCC
Q 017868          252 MGTGIDVSFDCAGL  265 (365)
Q Consensus       252 ~~~~~d~vid~~g~  265 (365)
                        .++|+||.+++.
T Consensus        76 --~~~d~vi~~a~~   87 (308)
T 1qyc_A           76 --KNVDVVISTVGS   87 (308)
T ss_dssp             --HTCSEEEECCCG
T ss_pred             --cCCCEEEECCcc
Confidence              269999999874

>3c3y_A Pfomt, O-methyltransferase; plant secondary metabolism; HET: SAH; 1.37A {Mesembryanthemum crystallinum}

Probab=93.90  E-value=0.32  Score=40.74  Aligned_cols=103  Identities=16%  Similarity=0.188  Sum_probs=62.8

Q ss_pred             CCCCCEEEEEcCCHHHHHHHHHHHHHCC-CCeEEEEeCChhHHHHHHH----cCCCE-EEeCCCCcccHHHHHHHHHHHh
Q 017868          179 IGPETNVLIMGAGPIGLVTMLGAPRAFG-APRIVIVDVDDYRLSVAKE----IGADN-IVKVSTNLQDIAEEVEKIQKAM  252 (365)
Q Consensus       179 ~~~g~~vlI~G~g~~G~~ai~~l~~~~g-~~~vi~v~~~~~~~~~~~~----~g~~~-~~~~~~~~~~~~~~i~~~~~~~  252 (365)
                      ..++.+||-.|+|. |..++. +++.++ ...+++++.+++..+.+++    .|... +....   .+..+.+..+....
T Consensus        68 ~~~~~~VLeiG~G~-G~~~~~-la~~~~~~~~v~~iD~~~~~~~~a~~~~~~~g~~~~i~~~~---gda~~~l~~l~~~~  142 (237)
T 3c3y_A           68 LVNAKKTIEVGVFT-GYSLLL-TALSIPDDGKITAIDFDREAYEIGLPFIRKAGVEHKINFIE---SDAMLALDNLLQGQ  142 (237)
T ss_dssp             HTTCCEEEEECCTT-SHHHHH-HHHHSCTTCEEEEEESCHHHHHHHHHHHHHTTCGGGEEEEE---SCHHHHHHHHHHST
T ss_pred             hhCCCEEEEeCCCC-CHHHHH-HHHhCCCCCEEEEEECCHHHHHHHHHHHHHcCCCCcEEEEE---cCHHHHHHHHHhcc
Confidence            35667999998753 556666 666653 3489999999987766543    45532 21111   23333333332111


Q ss_pred             --CCCceEEEeCCCC---HHHHHHHHHhcccCCEEEEEc
Q 017868          253 --GTGIDVSFDCAGL---NKTMSTALGATCAGGKVCLVG  286 (365)
Q Consensus       253 --~~~~d~vid~~g~---~~~~~~~~~~l~~~G~~~~~g  286 (365)
                        ...+|+||-....   ...+..+.+.|+++|.++.-.
T Consensus       143 ~~~~~fD~I~~d~~~~~~~~~l~~~~~~L~pGG~lv~d~  181 (237)
T 3c3y_A          143 ESEGSYDFGFVDADKPNYIKYHERLMKLVKVGGIVAYDN  181 (237)
T ss_dssp             TCTTCEEEEEECSCGGGHHHHHHHHHHHEEEEEEEEEEC
T ss_pred             CCCCCcCEEEECCchHHHHHHHHHHHHhcCCCeEEEEec
Confidence              3579999854332   345677889999999987653

>3uce_A Dehydrogenase; rossmann fold, oxidoreductase; HET: NDP; 1.80A {Vibrio vulnificus}

Probab=93.89  E-value=0.093  Score=43.53  Aligned_cols=63  Identities=14%  Similarity=0.143  Sum_probs=39.8

Q ss_pred             CCCEEEEEcC-CHHHHHHHHHHHHHCCCCeEEEEeCChhHHHHHHHcCCCEEEeCCCCcccHHHHHHHHHHHhCCCceEE
Q 017868          181 PETNVLIMGA-GPIGLVTMLGAPRAFGAPRIVIVDVDDYRLSVAKEIGADNIVKVSTNLQDIAEEVEKIQKAMGTGIDVS  259 (365)
Q Consensus       181 ~g~~vlI~G~-g~~G~~ai~~l~~~~g~~~vi~v~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~i~~~~~~~~~~~d~v  259 (365)
                      .++++||+|+ +++|.++++.++ ..|+ +|+.++++++             .+.. +.++    ++++.+.. +++|++
T Consensus         5 ~~k~vlVTGas~gIG~~~a~~l~-~~G~-~V~~~~r~~~-------------~D~~-~~~~----v~~~~~~~-g~id~l   63 (223)
T 3uce_A            5 DKTVYVVLGGTSGIGAELAKQLE-SEHT-IVHVASRQTG-------------LDIS-DEKS----VYHYFETI-GAFDHL   63 (223)
T ss_dssp             CCEEEEEETTTSHHHHHHHHHHC-STTE-EEEEESGGGT-------------CCTT-CHHH----HHHHHHHH-CSEEEE
T ss_pred             CCCEEEEECCCCHHHHHHHHHHH-HCCC-EEEEecCCcc-------------cCCC-CHHH----HHHHHHHh-CCCCEE
Confidence            4678899987 999999999454 5588 5777766544             1221 1122    22222222 578999


Q ss_pred             EeCCC
Q 017868          260 FDCAG  264 (365)
Q Consensus       260 id~~g  264 (365)
                      +.++|
T Consensus        64 v~nAg   68 (223)
T 3uce_A           64 IVTAG   68 (223)
T ss_dssp             EECCC
T ss_pred             EECCC
Confidence            98877

>2yut_A Putative short-chain oxidoreductase; alpha and beta proteins (A/B), NAD(P)-binding rossmann-fold structural genomics, NPPSFA; HET: NAP; 2.20A {Thermus thermophilus}

Probab=93.88  E-value=0.24  Score=40.27  Aligned_cols=72  Identities=21%  Similarity=0.279  Sum_probs=44.8

Q ss_pred             EEEEEcC-CHHHHHHHHHHHHHCCCCeEEEEeCChhHHHHH-HHcCCCEEEeCCCCcccHHHHHHHHHHHhCCCceEEEe
Q 017868          184 NVLIMGA-GPIGLVTMLGAPRAFGAPRIVIVDVDDYRLSVA-KEIGADNIVKVSTNLQDIAEEVEKIQKAMGTGIDVSFD  261 (365)
Q Consensus       184 ~vlI~G~-g~~G~~ai~~l~~~~g~~~vi~v~~~~~~~~~~-~~~g~~~~~~~~~~~~~~~~~i~~~~~~~~~~~d~vid  261 (365)
                      ++||+|+ |.+|..+++.+++.    .|+++++++++.+.+ ++++. ..+..+-  .+. +.+++..+. .+++|++|.
T Consensus         2 ~vlVtGasg~iG~~la~~l~~~----~V~~~~r~~~~~~~~~~~~~~-~~~~~D~--~~~-~~~~~~~~~-~~~id~vi~   72 (207)
T 2yut_A            2 RVLITGATGGLGGAFARALKGH----DLLLSGRRAGALAELAREVGA-RALPADL--ADE-LEAKALLEE-AGPLDLLVH   72 (207)
T ss_dssp             EEEEETTTSHHHHHHHHHTTTS----EEEEECSCHHHHHHHHHHHTC-EECCCCT--TSH-HHHHHHHHH-HCSEEEEEE
T ss_pred             EEEEEcCCcHHHHHHHHHHHhC----CEEEEECCHHHHHHHHHhccC-cEEEeeC--CCH-HHHHHHHHh-cCCCCEEEE
Confidence            6899987 99999998855543    688888887766543 44443 3332222  222 223333221 248999999


Q ss_pred             CCC
Q 017868          262 CAG  264 (365)
Q Consensus       262 ~~g  264 (365)
                      ++|
T Consensus        73 ~ag   75 (207)
T 2yut_A           73 AVG   75 (207)
T ss_dssp             CCC
T ss_pred             CCC
Confidence            887

>2z1m_A GDP-D-mannose dehydratase; short-chain dehydrogenase/reductase, lyase, structural genom NPPSFA; HET: NDP GDP; 2.00A {Aquifex aeolicus} PDB: 2z95_A*

Probab=93.86  E-value=0.11  Score=46.16  Aligned_cols=79  Identities=16%  Similarity=0.164  Sum_probs=45.5

Q ss_pred             CCEEEEEcC-CHHHHHHHHHHHHHCCCCeEEEEeCChhHH--HHHHHcCC-CEEEeCCCCcccHHHHHHHHHHHhCCCce
Q 017868          182 ETNVLIMGA-GPIGLVTMLGAPRAFGAPRIVIVDVDDYRL--SVAKEIGA-DNIVKVSTNLQDIAEEVEKIQKAMGTGID  257 (365)
Q Consensus       182 g~~vlI~G~-g~~G~~ai~~l~~~~g~~~vi~v~~~~~~~--~~~~~~g~-~~~~~~~~~~~~~~~~i~~~~~~~~~~~d  257 (365)
                      +.+|||+|+ |.+|..+++.|+ ..|+ .|+++++++++.  +.++.++. ..+..+..+-.+. +.+.+..+  +.++|
T Consensus         3 ~~~vlVtGatG~iG~~l~~~L~-~~G~-~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~Dl~d~-~~~~~~~~--~~~~d   77 (345)
T 2z1m_A            3 GKRALITGIRGQDGAYLAKLLL-EKGY-EVYGADRRSGEFASWRLKELGIENDVKIIHMDLLEF-SNIIRTIE--KVQPD   77 (345)
T ss_dssp             CCEEEEETTTSHHHHHHHHHHH-HTTC-EEEEECSCCSTTTTHHHHHTTCTTTEEECCCCTTCH-HHHHHHHH--HHCCS
T ss_pred             CCEEEEECCCChHHHHHHHHHH-HCCC-EEEEEECCCcccccccHhhccccCceeEEECCCCCH-HHHHHHHH--hcCCC
Confidence            578999987 999999999454 5588 577777765432  23344421 1111111221222 23333322  12689


Q ss_pred             EEEeCCCC
Q 017868          258 VSFDCAGL  265 (365)
Q Consensus       258 ~vid~~g~  265 (365)
                      +||.++|.
T Consensus        78 ~vih~A~~   85 (345)
T 2z1m_A           78 EVYNLAAQ   85 (345)
T ss_dssp             EEEECCCC
T ss_pred             EEEECCCC
Confidence            99999873

>1y1p_A ARII, aldehyde reductase II; rossmann fold, short chain dehydrogenase reductase, oxidoreductase; HET: NMN AMP; 1.60A {Sporidiobolus salmonicolor} SCOP: c.2.1.2 PDB: 1ujm_A* 1zze_A

Probab=93.84  E-value=0.21  Score=44.08  Aligned_cols=41  Identities=17%  Similarity=0.135  Sum_probs=31.2

Q ss_pred             CCCCEEEEEcC-CHHHHHHHHHHHHHCCCCeEEEEeCChhHHHH
Q 017868          180 GPETNVLIMGA-GPIGLVTMLGAPRAFGAPRIVIVDVDDYRLSV  222 (365)
Q Consensus       180 ~~g~~vlI~G~-g~~G~~ai~~l~~~~g~~~vi~v~~~~~~~~~  222 (365)
                      -++.+|||+|+ |.+|..++..|+ ..|+ .|++++++.++.+.
T Consensus         9 ~~~~~vlVTGatG~iG~~l~~~L~-~~g~-~V~~~~r~~~~~~~   50 (342)
T 1y1p_A            9 PEGSLVLVTGANGFVASHVVEQLL-EHGY-KVRGTARSASKLAN   50 (342)
T ss_dssp             CTTCEEEEETTTSHHHHHHHHHHH-HTTC-EEEEEESSHHHHHH
T ss_pred             CCCCEEEEECCccHHHHHHHHHHH-HCCC-EEEEEeCCcccHHH
Confidence            45789999987 999999999454 5588 57777777766543

>3ec7_A Putative dehydrogenase; alpha-beta, structural genomics, PSI-2, protein structure in midwest center for structural genomics, MCSG; HET: MSE NAD EPE; 2.15A {Salmonella typhimurium}

Probab=93.79  E-value=0.43  Score=42.73  Aligned_cols=133  Identities=15%  Similarity=0.163  Sum_probs=80.3

Q ss_pred             CEEEEEcCCHHHHHHHHHHH-HHCCCCeEEEEeCChhHHH-HHHHcCC-CEEEeCCCCcccHHHHHHHHHHHhCCCceEE
Q 017868          183 TNVLIMGAGPIGLVTMLGAP-RAFGAPRIVIVDVDDYRLS-VAKEIGA-DNIVKVSTNLQDIAEEVEKIQKAMGTGIDVS  259 (365)
Q Consensus       183 ~~vlI~G~g~~G~~ai~~l~-~~~g~~~vi~v~~~~~~~~-~~~~~g~-~~~~~~~~~~~~~~~~i~~~~~~~~~~~d~v  259 (365)
                      -+|.|+|+|.+|...+..+. +..+++.+.++++++++.+ +++++|. ....      .++.+.+.      ...+|+|
T Consensus        24 ~rvgiIG~G~~g~~~~~~l~~~~~~~~lvav~d~~~~~~~~~a~~~g~~~~~~------~~~~~ll~------~~~~D~V   91 (357)
T 3ec7_A           24 LKAGIVGIGMIGSDHLRRLANTVSGVEVVAVCDIVAGRAQAALDKYAIEAKDY------NDYHDLIN------DKDVEVV   91 (357)
T ss_dssp             EEEEEECCSHHHHHHHHHHHHTCTTEEEEEEECSSTTHHHHHHHHHTCCCEEE------SSHHHHHH------CTTCCEE
T ss_pred             eeEEEECCcHHHHHHHHHHHhhCCCcEEEEEEeCCHHHHHHHHHHhCCCCeee------CCHHHHhc------CCCCCEE
Confidence            36899999999998888454 3356755556777777755 5677884 2222      24433332      3579999


Q ss_pred             EeCCCCHHHHHHHHHhcccCCEEEEEccCCCCccccchH----hhhcCcEE--Ee-ecccCCcHHHHHHHHHcCCC
Q 017868          260 FDCAGLNKTMSTALGATCAGGKVCLVGMGHHEMTVPLTP----AAVREVDV--VG-VFRYKNTWPLCLELLRSGKI  328 (365)
Q Consensus       260 id~~g~~~~~~~~~~~l~~~G~~~~~g~~~~~~~~~~~~----~~~~~~~i--~~-~~~~~~~~~~~~~~l~~g~~  328 (365)
                      +.|+....+...+..++..+-. +++.-+..........    .-.++..+  .+ ...+...++.+.+++++|.+
T Consensus        92 ~i~tp~~~h~~~~~~al~aGk~-Vl~EKPla~~~~e~~~l~~~a~~~g~~~~~v~~~~R~~p~~~~~k~~i~~g~i  166 (357)
T 3ec7_A           92 IITASNEAHADVAVAALNANKY-VFCEKPLAVTAADCQRVIEAEQKNGKRMVQIGFMRRYDKGYVQLKNIIDSGEI  166 (357)
T ss_dssp             EECSCGGGHHHHHHHHHHTTCE-EEEESSSCSSHHHHHHHHHHHHHHTSCCEEEECGGGGSHHHHHHHHHHHHTTT
T ss_pred             EEcCCcHHHHHHHHHHHHCCCC-EEeecCccCCHHHHHHHHHHHHHhCCeEEEEeecccCCHHHHHHHHHHhcCCC
Confidence            9999988788888888886644 4442111100111111    11233322  22 23346678888899999887

>1sui_A Caffeoyl-COA O-methyltransferase; rossmann fold, protein-cofactor-substrate complex; HET: SAH FRE; 2.70A {Medicago sativa} SCOP: c.66.1.1 PDB: 1sus_A*

Probab=93.76  E-value=0.56  Score=39.57  Aligned_cols=103  Identities=15%  Similarity=0.136  Sum_probs=62.7

Q ss_pred             CCCCCEEEEEcCCHHHHHHHHHHHHHCC-CCeEEEEeCChhHHHHHHH----cCCCE-EEeCCCCcccHHHHHHHHHHHh
Q 017868          179 IGPETNVLIMGAGPIGLVTMLGAPRAFG-APRIVIVDVDDYRLSVAKE----IGADN-IVKVSTNLQDIAEEVEKIQKAM  252 (365)
Q Consensus       179 ~~~g~~vlI~G~g~~G~~ai~~l~~~~g-~~~vi~v~~~~~~~~~~~~----~g~~~-~~~~~~~~~~~~~~i~~~~~~~  252 (365)
                      ..++.+||-.|+|. |..++. +++.+. ...+++++.+++..+.+++    .|... +....   .+..+.+..+....
T Consensus        77 ~~~~~~VLeiG~G~-G~~~~~-la~~~~~~~~v~~iD~s~~~~~~a~~~~~~~g~~~~i~~~~---gda~~~l~~l~~~~  151 (247)
T 1sui_A           77 LINAKNTMEIGVYT-GYSLLA-TALAIPEDGKILAMDINKENYELGLPVIKKAGVDHKIDFRE---GPALPVLDEMIKDE  151 (247)
T ss_dssp             HTTCCEEEEECCGG-GHHHHH-HHHHSCTTCEEEEEESCCHHHHHHHHHHHHTTCGGGEEEEE---SCHHHHHHHHHHSG
T ss_pred             hhCcCEEEEeCCCc-CHHHHH-HHHhCCCCCEEEEEECCHHHHHHHHHHHHHcCCCCCeEEEE---CCHHHHHHHHHhcc
Confidence            35667999998753 666666 666653 2389999999887766544    45421 21111   23333333222110


Q ss_pred             --CCCceEEEeCCCC---HHHHHHHHHhcccCCEEEEEc
Q 017868          253 --GTGIDVSFDCAGL---NKTMSTALGATCAGGKVCLVG  286 (365)
Q Consensus       253 --~~~~d~vid~~g~---~~~~~~~~~~l~~~G~~~~~g  286 (365)
                        ...+|+||-....   ...+..+.+.|+++|.++.-.
T Consensus       152 ~~~~~fD~V~~d~~~~~~~~~l~~~~~~LkpGG~lv~d~  190 (247)
T 1sui_A          152 KNHGSYDFIFVDADKDNYLNYHKRLIDLVKVGGVIGYDN  190 (247)
T ss_dssp             GGTTCBSEEEECSCSTTHHHHHHHHHHHBCTTCCEEEEC
T ss_pred             CCCCCEEEEEEcCchHHHHHHHHHHHHhCCCCeEEEEec
Confidence              3679999853322   346678889999999988653

>2nac_A NAD-dependent formate dehydrogenase; oxidoreductase(aldehyde(D),NAD+(A)); 1.80A {Pseudomonas SP} SCOP: c.2.1.4 c.23.12.1 PDB: 2nad_A* 2go1_A 2gug_A* 2gsd_A* 3fn4_A

Probab=93.73  E-value=0.12  Score=46.97  Aligned_cols=90  Identities=19%  Similarity=0.128  Sum_probs=60.7

Q ss_pred             CCCEEEEEcCCHHHHHHHHHHHHHCCCCeEEEEeCChhHHHHHHHcCCCEEEeCCCCcccHHHHHHHHHHHhCCCceEEE
Q 017868          181 PETNVLIMGAGPIGLVTMLGAPRAFGAPRIVIVDVDDYRLSVAKEIGADNIVKVSTNLQDIAEEVEKIQKAMGTGIDVSF  260 (365)
Q Consensus       181 ~g~~vlI~G~g~~G~~ai~~l~~~~g~~~vi~v~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~i~~~~~~~~~~~d~vi  260 (365)
                      .|.+|.|+|.|.+|..+++ .++.+|. .|++.+++..+.+..+++|+...       .++.    ++    -...|+|+
T Consensus       190 ~gktvGIIGlG~IG~~vA~-~l~a~G~-~V~~~d~~~~~~~~~~~~G~~~~-------~~l~----el----l~~aDvV~  252 (393)
T 2nac_A          190 EAMHVGTVAAGRIGLAVLR-RLAPFDV-HLHYTDRHRLPESVEKELNLTWH-------ATRE----DM----YPVCDVVT  252 (393)
T ss_dssp             TTCEEEEECCSHHHHHHHH-HHGGGTC-EEEEECSSCCCHHHHHHHTCEEC-------SSHH----HH----GGGCSEEE
T ss_pred             CCCEEEEEeECHHHHHHHH-HHHhCCC-EEEEEcCCccchhhHhhcCceec-------CCHH----HH----HhcCCEEE
Confidence            6789999999999999999 7788998 68888877655566666775421       1222    12    13678888


Q ss_pred             eCCCCHH----HH-HHHHHhcccCCEEEEEcc
Q 017868          261 DCAGLNK----TM-STALGATCAGGKVCLVGM  287 (365)
Q Consensus       261 d~~g~~~----~~-~~~~~~l~~~G~~~~~g~  287 (365)
                      -++....    .+ ...+..|+++..++.++.
T Consensus       253 l~~Plt~~t~~li~~~~l~~mk~gailIN~aR  284 (393)
T 2nac_A          253 LNCPLHPETEHMINDETLKLFKRGAYIVNTAR  284 (393)
T ss_dssp             ECSCCCTTTTTCBSHHHHTTSCTTEEEEECSC
T ss_pred             EecCCchHHHHHhhHHHHhhCCCCCEEEECCC
Confidence            8765321    11 245667777777776653

>2fr1_A Erythromycin synthase, eryai; short chain dehydrogenase/reductase, oxidoreductase; HET: NDP; 1.79A {Saccharopolyspora erythraea} SCOP: c.2.1.2 c.2.1.2 PDB: 2fr0_A*

Probab=93.68  E-value=0.48  Score=44.43  Aligned_cols=82  Identities=22%  Similarity=0.312  Sum_probs=50.5

Q ss_pred             CCCCCEEEEEcC-CHHHHHHHHHHHHHCCCCeEEEEeCChhH----H---HHHHHcCCCEE-EeCCCCcccHHHHHHHHH
Q 017868          179 IGPETNVLIMGA-GPIGLVTMLGAPRAFGAPRIVIVDVDDYR----L---SVAKEIGADNI-VKVSTNLQDIAEEVEKIQ  249 (365)
Q Consensus       179 ~~~g~~vlI~G~-g~~G~~ai~~l~~~~g~~~vi~v~~~~~~----~---~~~~~~g~~~~-~~~~~~~~~~~~~i~~~~  249 (365)
                      ++++.++||+|+ |++|..++..+++. |+++++.+.++...    .   +.++..|.... +..+-.  +. +.+++..
T Consensus       223 ~~~~~~vLITGgtGgIG~~la~~La~~-G~~~vvl~~R~~~~~~~~~~l~~~l~~~g~~v~~~~~Dv~--d~-~~v~~~~  298 (486)
T 2fr1_A          223 WKPTGTVLVTGGTGGVGGQIARWLARR-GAPHLLLVSRSGPDADGAGELVAELEALGARTTVAACDVT--DR-ESVRELL  298 (486)
T ss_dssp             CCCCSEEEEETTTSHHHHHHHHHHHHH-TCSEEEEEESSGGGSTTHHHHHHHHHHTTCEEEEEECCTT--CH-HHHHHHH
T ss_pred             cCCCCEEEEECCCCHHHHHHHHHHHHc-CCCEEEEEcCCCCCcHHHHHHHHHHHhcCCEEEEEEeCCC--CH-HHHHHHH
Confidence            567899999987 99999999966655 98778888776531    1   23445565322 222221  21 2233332


Q ss_pred             HH--hCCCceEEEeCCC
Q 017868          250 KA--MGTGIDVSFDCAG  264 (365)
Q Consensus       250 ~~--~~~~~d~vid~~g  264 (365)
                      +.  ..+++|.||.+.|
T Consensus       299 ~~i~~~g~ld~VIh~AG  315 (486)
T 2fr1_A          299 GGIGDDVPLSAVFHAAA  315 (486)
T ss_dssp             HTSCTTSCEEEEEECCC
T ss_pred             HHHHhcCCCcEEEECCc
Confidence            21  1247899999988

>3jtm_A Formate dehydrogenase, mitochondrial; mitochondrion, NAD, oxidoreductase, T peptide; 1.30A {Arabidopsis thaliana} PDB: 3n7u_A* 3naq_A

Probab=93.66  E-value=0.12  Score=46.22  Aligned_cols=90  Identities=22%  Similarity=0.252  Sum_probs=62.9

Q ss_pred             CCCEEEEEcCCHHHHHHHHHHHHHCCCCeEEEEeCChhHHHHHHHcCCCEEEeCCCCcccHHHHHHHHHHHhCCCceEEE
Q 017868          181 PETNVLIMGAGPIGLVTMLGAPRAFGAPRIVIVDVDDYRLSVAKEIGADNIVKVSTNLQDIAEEVEKIQKAMGTGIDVSF  260 (365)
Q Consensus       181 ~g~~vlI~G~g~~G~~ai~~l~~~~g~~~vi~v~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~i~~~~~~~~~~~d~vi  260 (365)
                      .|.+|.|+|.|.+|..+++ .++.+|+ .|++.+++....+.++++|+..+       .++.+    +    -...|+|+
T Consensus       163 ~gktvGIIG~G~IG~~vA~-~l~~~G~-~V~~~dr~~~~~~~~~~~g~~~~-------~~l~e----l----l~~aDvV~  225 (351)
T 3jtm_A          163 EGKTIGTVGAGRIGKLLLQ-RLKPFGC-NLLYHDRLQMAPELEKETGAKFV-------EDLNE----M----LPKCDVIV  225 (351)
T ss_dssp             TTCEEEEECCSHHHHHHHH-HHGGGCC-EEEEECSSCCCHHHHHHHCCEEC-------SCHHH----H----GGGCSEEE
T ss_pred             cCCEEeEEEeCHHHHHHHH-HHHHCCC-EEEEeCCCccCHHHHHhCCCeEc-------CCHHH----H----HhcCCEEE
Confidence            5789999999999999999 7789999 58888877666666677776431       12222    2    24678888


Q ss_pred             eCCCCH-H---H-HHHHHHhcccCCEEEEEcc
Q 017868          261 DCAGLN-K---T-MSTALGATCAGGKVCLVGM  287 (365)
Q Consensus       261 d~~g~~-~---~-~~~~~~~l~~~G~~~~~g~  287 (365)
                      -++... .   . -...+..|+++..++..+.
T Consensus       226 l~~Plt~~t~~li~~~~l~~mk~gailIN~aR  257 (351)
T 3jtm_A          226 INMPLTEKTRGMFNKELIGKLKKGVLIVNNAR  257 (351)
T ss_dssp             ECSCCCTTTTTCBSHHHHHHSCTTEEEEECSC
T ss_pred             ECCCCCHHHHHhhcHHHHhcCCCCCEEEECcC
Confidence            876521 1   1 1356677888888777754

>3btv_A Galactose/lactose metabolism regulatory protein GAL80; eukaryotic transcription repressor, acetylation, carbohydrate metabolism; 2.10A {Saccharomyces cerevisiae} PDB: 3bts_A 3v2u_A* 3btu_A

Probab=93.66  E-value=0.27  Score=45.50  Aligned_cols=136  Identities=13%  Similarity=-0.014  Sum_probs=79.6

Q ss_pred             CEEEEEcC----CHHHHHHHHHHHHH-CCCCeEEEEeCChhHHH-HHHHcCCCEEEeCCCCcccHHHHHHHHHHHhCCCc
Q 017868          183 TNVLIMGA----GPIGLVTMLGAPRA-FGAPRIVIVDVDDYRLS-VAKEIGADNIVKVSTNLQDIAEEVEKIQKAMGTGI  256 (365)
Q Consensus       183 ~~vlI~G~----g~~G~~ai~~l~~~-~g~~~vi~v~~~~~~~~-~~~~~g~~~~~~~~~~~~~~~~~i~~~~~~~~~~~  256 (365)
                      -+|.|+|+    |.+|...+..+.+. -+++.+.++++++++.+ +++++|...+..+    .++.+.+    .  ...+
T Consensus        21 irvgiIG~g~~gG~~g~~~~~~l~~~~~~~~lvav~d~~~~~~~~~a~~~g~~~~~~~----~~~~~ll----~--~~~v   90 (438)
T 3btv_A           21 IRVGFVGLNAAKGWAIKTHYPAILQLSSQFQITALYSPKIETSIATIQRLKLSNATAF----PTLESFA----S--SSTI   90 (438)
T ss_dssp             EEEEEESCCTTSSSTTTTHHHHHHHTTTTEEEEEEECSSHHHHHHHHHHTTCTTCEEE----SSHHHHH----H--CSSC
T ss_pred             CEEEEEcccCCCChHHHHHHHHHHhcCCCeEEEEEEeCCHHHHHHHHHHcCCCcceee----CCHHHHh----c--CCCC
Confidence            37889998    77888777745444 46755566777777664 5677886511112    2343332    2  3579


Q ss_pred             eEEEeCCCCHHHHHHHHHhcccCC-----EEEEEccCCCCccccchH----hhhcCcEEEeec--ccCCcHHHHHHHHHc
Q 017868          257 DVSFDCAGLNKTMSTALGATCAGG-----KVCLVGMGHHEMTVPLTP----AAVREVDVVGVF--RYKNTWPLCLELLRS  325 (365)
Q Consensus       257 d~vid~~g~~~~~~~~~~~l~~~G-----~~~~~g~~~~~~~~~~~~----~~~~~~~i~~~~--~~~~~~~~~~~~l~~  325 (365)
                      |+|+.|+....+...+..+|..+.     +-+++.-+..........    .-.+++.+.-.+  .+...+..+.+++++
T Consensus        91 D~V~i~tp~~~H~~~~~~al~aG~~~~~~khVl~EKP~a~~~~e~~~l~~~a~~~g~~~~v~~~~R~~p~~~~~k~~i~~  170 (438)
T 3btv_A           91 DMIVIAIQVASHYEVVMPLLEFSKNNPNLKYLFVEWALACSLDQAESIYKAAAERGVQTIISLQGRKSPYILRAKELISQ  170 (438)
T ss_dssp             SEEEECSCHHHHHHHHHHHHHHGGGCTTCCEEEEESSCCSSHHHHHHHHHHHHTTTCEEEEECGGGGCHHHHHHHHHHHT
T ss_pred             CEEEEeCCcHHHHHHHHHHHHCCCCcccceeEEecCcccCCHHHHHHHHHHHHHcCCeEEEecccccCHHHHHHHHHHHc
Confidence            999999998777778888887651     444443111000001111    122333333222  235667888899999


Q ss_pred             CCC
Q 017868          326 GKI  328 (365)
Q Consensus       326 g~~  328 (365)
                      |.+
T Consensus       171 G~i  173 (438)
T 3btv_A          171 GYI  173 (438)
T ss_dssp             TTT
T ss_pred             CCC
Confidence            887

>2dkn_A 3-alpha-hydroxysteroid dehydrogenase; oxidoreductase, rossmann fold; HET: NAI; 1.80A {Pseudomonas SP}

Probab=93.61  E-value=0.25  Score=41.48  Aligned_cols=70  Identities=21%  Similarity=0.255  Sum_probs=40.9

Q ss_pred             CEEEEEcC-CHHHHHHHHHHHHHCCCCeEEEEeCChhHHHHHHHcCCCEEEeCCCCcccHHHHHHHHHHHhCCCceEEEe
Q 017868          183 TNVLIMGA-GPIGLVTMLGAPRAFGAPRIVIVDVDDYRLSVAKEIGADNIVKVSTNLQDIAEEVEKIQKAMGTGIDVSFD  261 (365)
Q Consensus       183 ~~vlI~G~-g~~G~~ai~~l~~~~g~~~vi~v~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~i~~~~~~~~~~~d~vid  261 (365)
                      .++||+|+ |.+|..++..++ ..|+ .|+++++++++.+.      .    +..+-.+ .+.++++.+...+++|++|.
T Consensus         2 k~vlVtGasg~iG~~l~~~L~-~~g~-~V~~~~r~~~~~~~------~----~~~D~~~-~~~~~~~~~~~~~~~d~vi~   68 (255)
T 2dkn_A            2 SVIAITGSASGIGAALKELLA-RAGH-TVIGIDRGQADIEA------D----LSTPGGR-ETAVAAVLDRCGGVLDGLVC   68 (255)
T ss_dssp             CEEEEETTTSHHHHHHHHHHH-HTTC-EEEEEESSSSSEEC------C----TTSHHHH-HHHHHHHHHHHTTCCSEEEE
T ss_pred             cEEEEeCCCcHHHHHHHHHHH-hCCC-EEEEEeCChhHccc------c----ccCCccc-HHHHHHHHHHcCCCccEEEE
Confidence            36899987 999999999554 5688 57777776543210      0    1111111 12233332222358999999


Q ss_pred             CCCC
Q 017868          262 CAGL  265 (365)
Q Consensus       262 ~~g~  265 (365)
                      ++|.
T Consensus        69 ~Ag~   72 (255)
T 2dkn_A           69 CAGV   72 (255)
T ss_dssp             CCCC
T ss_pred             CCCC
Confidence            8873

>3slg_A PBGP3 protein; structural genomics, seattle structural genomics center for infectious disease, ssgcid, melioidosis, glanders; 2.10A {Burkholderia pseudomallei}

Probab=93.60  E-value=0.17  Score=45.45  Aligned_cols=77  Identities=19%  Similarity=0.114  Sum_probs=45.7

Q ss_pred             CCCEEEEEcC-CHHHHHHHHHHHHHCCCCeEEEEeCChhHHHHHHHcCCCEEEeCCCCcccHHHHHHHHHHHhCCCceEE
Q 017868          181 PETNVLIMGA-GPIGLVTMLGAPRAFGAPRIVIVDVDDYRLSVAKEIGADNIVKVSTNLQDIAEEVEKIQKAMGTGIDVS  259 (365)
Q Consensus       181 ~g~~vlI~G~-g~~G~~ai~~l~~~~g~~~vi~v~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~i~~~~~~~~~~~d~v  259 (365)
                      .+.+|||+|+ |.+|..+++.|++.-|. .|++++++.++...+....-...+..+-. .+ .+.+.+..    .++|+|
T Consensus        23 ~~~~vlVtGatG~iG~~l~~~L~~~~g~-~V~~~~r~~~~~~~~~~~~~v~~~~~Dl~-~d-~~~~~~~~----~~~d~V   95 (372)
T 3slg_A           23 KAKKVLILGVNGFIGHHLSKRILETTDW-EVFGMDMQTDRLGDLVKHERMHFFEGDIT-IN-KEWVEYHV----KKCDVI   95 (372)
T ss_dssp             CCCEEEEESCSSHHHHHHHHHHHHHSSC-EEEEEESCCTTTGGGGGSTTEEEEECCTT-TC-HHHHHHHH----HHCSEE
T ss_pred             CCCEEEEECCCChHHHHHHHHHHhCCCC-EEEEEeCChhhhhhhccCCCeEEEeCccC-CC-HHHHHHHh----ccCCEE
Confidence            3578999987 99999999955554477 57777777655433322122222222221 02 22343332    269999


Q ss_pred             EeCCC
Q 017868          260 FDCAG  264 (365)
Q Consensus       260 id~~g  264 (365)
                      |.+++
T Consensus        96 ih~A~  100 (372)
T 3slg_A           96 LPLVA  100 (372)
T ss_dssp             EECBC
T ss_pred             EEcCc
Confidence            99876

>1uay_A Type II 3-hydroxyacyl-COA dehydrogenase; beta oxidation, fatty acid, structural genomi structural genomics/proteomics initiative, RSGI; HET: ADN; 1.40A {Thermus thermophilus} SCOP: c.2.1.2

Probab=93.60  E-value=0.33  Score=40.43  Aligned_cols=72  Identities=19%  Similarity=0.309  Sum_probs=43.7

Q ss_pred             CCEEEEEcC-CHHHHHHHHHHHHHCCCCeEEEEeCChhHHHHHHHcCCCEEEeCCC-CcccHHHHHHHHHHHhCCCceEE
Q 017868          182 ETNVLIMGA-GPIGLVTMLGAPRAFGAPRIVIVDVDDYRLSVAKEIGADNIVKVST-NLQDIAEEVEKIQKAMGTGIDVS  259 (365)
Q Consensus       182 g~~vlI~G~-g~~G~~ai~~l~~~~g~~~vi~v~~~~~~~~~~~~~g~~~~~~~~~-~~~~~~~~i~~~~~~~~~~~d~v  259 (365)
                      +.++||+|+ |++|.++++.+++ .|+ .|++++++++ .   +++   ..+..+- +.+++.+.++++ +. .+++|++
T Consensus         2 ~k~vlVtGasggiG~~la~~l~~-~G~-~V~~~~r~~~-~---~~~---~~~~~D~~~~~~~~~~~~~~-~~-~~~~d~l   70 (242)
T 1uay_A            2 ERSALVTGGASGLGRAAALALKA-RGY-RVVVLDLRRE-G---EDL---IYVEGDVTREEDVRRAVARA-QE-EAPLFAV   70 (242)
T ss_dssp             CCEEEEETTTSHHHHHHHHHHHH-HTC-EEEEEESSCC-S---SSS---EEEECCTTCHHHHHHHHHHH-HH-HSCEEEE
T ss_pred             CCEEEEeCCCChHHHHHHHHHHH-CCC-EEEEEccCcc-c---cce---EEEeCCCCCHHHHHHHHHHH-Hh-hCCceEE
Confidence            568999987 9999999995654 498 5677766554 1   111   2232222 223333334433 22 2479999


Q ss_pred             EeCCC
Q 017868          260 FDCAG  264 (365)
Q Consensus       260 id~~g  264 (365)
                      |.++|
T Consensus        71 i~~ag   75 (242)
T 1uay_A           71 VSAAG   75 (242)
T ss_dssp             EECCC
T ss_pred             EEccc
Confidence            99877

>3dr5_A Putative O-methyltransferase; Q8NRD3, CGL1119, PF01596, CGR117, NESG, structural genomics, PSI-2, protein structure initiative; 2.25A {Corynebacterium glutamicum}

Probab=93.59  E-value=0.58  Score=38.68  Aligned_cols=103  Identities=15%  Similarity=0.204  Sum_probs=64.5

Q ss_pred             HhcCCCCCCEEEEEcCCHHHHHHHHHHHHHCC-CCeEEEEeCChhHHHHHH----HcCCC--EEEeCCCCcccHHHHHHH
Q 017868          175 RRANIGPETNVLIMGAGPIGLVTMLGAPRAFG-APRIVIVDVDDYRLSVAK----EIGAD--NIVKVSTNLQDIAEEVEK  247 (365)
Q Consensus       175 ~~~~~~~g~~vlI~G~g~~G~~ai~~l~~~~g-~~~vi~v~~~~~~~~~~~----~~g~~--~~~~~~~~~~~~~~~i~~  247 (365)
                      ...+.+++.+||-.|+|. |..++. +++.++ ...+++++.+++..+.++    +.|..  .+.....   +..+.+..
T Consensus        50 ~~~~~~~~~~vLdiG~G~-G~~~~~-la~~~~~~~~v~~vD~~~~~~~~a~~~~~~~g~~~~~i~~~~g---da~~~l~~  124 (221)
T 3dr5_A           50 ATTNGNGSTGAIAITPAA-GLVGLY-ILNGLADNTTLTCIDPESEHQRQAKALFREAGYSPSRVRFLLS---RPLDVMSR  124 (221)
T ss_dssp             HHSCCTTCCEEEEESTTH-HHHHHH-HHHHSCTTSEEEEECSCHHHHHHHHHHHHHTTCCGGGEEEECS---CHHHHGGG
T ss_pred             HhhCCCCCCCEEEEcCCc-hHHHHH-HHHhCCCCCEEEEEECCHHHHHHHHHHHHHcCCCcCcEEEEEc---CHHHHHHH
Confidence            334455667999888864 777777 666653 337999999998766554    34543  2222222   22222211


Q ss_pred             HHHHhCCCceEEEeCCCC---HHHHHHHHHhcccCCEEEEE
Q 017868          248 IQKAMGTGIDVSFDCAGL---NKTMSTALGATCAGGKVCLV  285 (365)
Q Consensus       248 ~~~~~~~~~d~vid~~g~---~~~~~~~~~~l~~~G~~~~~  285 (365)
                      +   ..+.||+||-....   ...+..+.+.|+++|.++.-
T Consensus       125 ~---~~~~fD~V~~d~~~~~~~~~l~~~~~~LkpGG~lv~d  162 (221)
T 3dr5_A          125 L---ANDSYQLVFGQVSPMDLKALVDAAWPLLRRGGALVLA  162 (221)
T ss_dssp             S---CTTCEEEEEECCCTTTHHHHHHHHHHHEEEEEEEEET
T ss_pred             h---cCCCcCeEEEcCcHHHHHHHHHHHHHHcCCCcEEEEe
Confidence            1   14689999864432   23567888999999998874

>3ius_A Uncharacterized conserved protein; APC63810, silicibacter pomeroyi DSS, structural genomics, PSI-2, protein structure initiative; HET: MSE; 1.66A {Ruegeria pomeroyi dss-3}

Probab=93.58  E-value=0.28  Score=42.12  Aligned_cols=89  Identities=13%  Similarity=0.090  Sum_probs=57.3

Q ss_pred             CEEEEEcCCHHHHHHHHHHHHHCCCCeEEEEeCChhHHHHHHHcCCCEEEeCCCCcccHHHHHHHHHHHhCCCceEEEeC
Q 017868          183 TNVLIMGAGPIGLVTMLGAPRAFGAPRIVIVDVDDYRLSVAKEIGADNIVKVSTNLQDIAEEVEKIQKAMGTGIDVSFDC  262 (365)
Q Consensus       183 ~~vlI~G~g~~G~~ai~~l~~~~g~~~vi~v~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~i~~~~~~~~~~~d~vid~  262 (365)
                      .+|||+|+|.+|..++. .+...|. .|+++++++++.+.+...++..+ ..+-  .++.          -.++|+||.+
T Consensus         6 ~~ilVtGaG~iG~~l~~-~L~~~g~-~V~~~~r~~~~~~~~~~~~~~~~-~~D~--~d~~----------~~~~d~vi~~   70 (286)
T 3ius_A            6 GTLLSFGHGYTARVLSR-ALAPQGW-RIIGTSRNPDQMEAIRASGAEPL-LWPG--EEPS----------LDGVTHLLIS   70 (286)
T ss_dssp             CEEEEETCCHHHHHHHH-HHGGGTC-EEEEEESCGGGHHHHHHTTEEEE-ESSS--SCCC----------CTTCCEEEEC
T ss_pred             CcEEEECCcHHHHHHHH-HHHHCCC-EEEEEEcChhhhhhHhhCCCeEE-Eecc--cccc----------cCCCCEEEEC
Confidence            58999999999999999 4445588 67888888888777666665433 2222  2221          2578999998


Q ss_pred             CCCH----HHHHHHHHhcc----cCCEEEEEc
Q 017868          263 AGLN----KTMSTALGATC----AGGKVCLVG  286 (365)
Q Consensus       263 ~g~~----~~~~~~~~~l~----~~G~~~~~g  286 (365)
                      ++..    ......++.+.    .-.+++.++
T Consensus        71 a~~~~~~~~~~~~l~~a~~~~~~~~~~~v~~S  102 (286)
T 3ius_A           71 TAPDSGGDPVLAALGDQIAARAAQFRWVGYLS  102 (286)
T ss_dssp             CCCBTTBCHHHHHHHHHHHHTGGGCSEEEEEE
T ss_pred             CCccccccHHHHHHHHHHHhhcCCceEEEEee
Confidence            8632    12233444433    236777765

>2cmg_A Spermidine synthase; transferase, putrescine aminopropyltransferase, spermidine biosynthesis, polyamine biosynthesis, SPEE; 2.0A {Helicobacter pylori} PDB: 2cmh_A

Probab=93.57  E-value=0.11  Score=44.36  Aligned_cols=92  Identities=14%  Similarity=-0.019  Sum_probs=59.5

Q ss_pred             CCCCEEEEEcCCHHHHHHHHHHHHHCCCCeEEEEeCChhHHHHHHHcCC--------CEEEeCCCCcccHHHHHHHHHHH
Q 017868          180 GPETNVLIMGAGPIGLVTMLGAPRAFGAPRIVIVDVDDYRLSVAKEIGA--------DNIVKVSTNLQDIAEEVEKIQKA  251 (365)
Q Consensus       180 ~~g~~vlI~G~g~~G~~ai~~l~~~~g~~~vi~v~~~~~~~~~~~~~g~--------~~~~~~~~~~~~~~~~i~~~~~~  251 (365)
                      ..+.+||+.|+|. |..+.. +++. + ..+.+++.+++-.+.+++.-.        +.+.....+..++          
T Consensus        71 ~~~~~VL~iG~G~-G~~~~~-ll~~-~-~~v~~veid~~~i~~ar~~~~~~~~~~~~~rv~~~~~D~~~~----------  136 (262)
T 2cmg_A           71 KELKEVLIVDGFD-LELAHQ-LFKY-D-THIDFVQADEKILDSFISFFPHFHEVKNNKNFTHAKQLLDLD----------  136 (262)
T ss_dssp             SCCCEEEEESSCC-HHHHHH-HTTS-S-CEEEEECSCHHHHGGGTTTSTTHHHHHTCTTEEEESSGGGSC----------
T ss_pred             CCCCEEEEEeCCc-CHHHHH-HHhC-C-CEEEEEECCHHHHHHHHHHHHhhccccCCCeEEEEechHHHH----------
Confidence            4568999999865 666667 6666 7 689999999887776654211        1111111111111          


Q ss_pred             hCCCceEEEeCCCCHH-HHHHHHHhcccCCEEEEEc
Q 017868          252 MGTGIDVSFDCAGLNK-TMSTALGATCAGGKVCLVG  286 (365)
Q Consensus       252 ~~~~~d~vid~~g~~~-~~~~~~~~l~~~G~~~~~g  286 (365)
                       -..+|+|+-....+. .+..+.++|+++|.++...
T Consensus       137 -~~~fD~Ii~d~~dp~~~~~~~~~~L~pgG~lv~~~  171 (262)
T 2cmg_A          137 -IKKYDLIFCLQEPDIHRIDGLKRMLKEDGVFISVA  171 (262)
T ss_dssp             -CCCEEEEEESSCCCHHHHHHHHTTEEEEEEEEEEE
T ss_pred             -HhhCCEEEECCCChHHHHHHHHHhcCCCcEEEEEc
Confidence             046999986544333 4778889999999998763

>3d7l_A LIN1944 protein; APC89317, structural genomics, PS protein structure initiative, midwest center for structural genomics, MCSG; 2.06A {Listeria innocua}

Probab=93.57  E-value=0.26  Score=39.86  Aligned_cols=62  Identities=19%  Similarity=0.384  Sum_probs=38.6

Q ss_pred             EEEEEcC-CHHHHHHHHHHHHHCCCCeEEEEeCChhHHHHHHHcCCCEEEeCCCCcccHHHHHHHHHHHhCCCceEEEeC
Q 017868          184 NVLIMGA-GPIGLVTMLGAPRAFGAPRIVIVDVDDYRLSVAKEIGADNIVKVSTNLQDIAEEVEKIQKAMGTGIDVSFDC  262 (365)
Q Consensus       184 ~vlI~G~-g~~G~~ai~~l~~~~g~~~vi~v~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~i~~~~~~~~~~~d~vid~  262 (365)
                      ++||+|+ |.+|.++++.++  .|+ .|+.++++++          ....++.    +. +.+++..+.. +++|++|.+
T Consensus         5 ~vlVtGasg~iG~~~~~~l~--~g~-~V~~~~r~~~----------~~~~D~~----~~-~~~~~~~~~~-~~~d~vi~~   65 (202)
T 3d7l_A            5 KILLIGASGTLGSAVKERLE--KKA-EVITAGRHSG----------DVTVDIT----NI-DSIKKMYEQV-GKVDAIVSA   65 (202)
T ss_dssp             EEEEETTTSHHHHHHHHHHT--TTS-EEEEEESSSS----------SEECCTT----CH-HHHHHHHHHH-CCEEEEEEC
T ss_pred             EEEEEcCCcHHHHHHHHHHH--CCC-eEEEEecCcc----------ceeeecC----CH-HHHHHHHHHh-CCCCEEEEC
Confidence            7999987 999999999555  698 5777766553          1112221    11 2233322211 479999998


Q ss_pred             CC
Q 017868          263 AG  264 (365)
Q Consensus       263 ~g  264 (365)
                      +|
T Consensus        66 ag   67 (202)
T 3d7l_A           66 TG   67 (202)
T ss_dssp             CC
T ss_pred             CC
Confidence            87

>1ydw_A AX110P-like protein; structural genomics, protein structure initiative, center for eukaryotic structural genomics, CESG, AT4G09670; 2.49A {Arabidopsis thaliana} SCOP: c.2.1.3 d.81.1.5 PDB: 2q4e_A

Probab=93.56  E-value=0.63  Score=41.68  Aligned_cols=90  Identities=17%  Similarity=0.053  Sum_probs=58.6

Q ss_pred             CEEEEEcCCHHHHHHHHHHHHHCCCCeEEEEeCChhHHH-HHHHcCC---CEEEeCCCCcccHHHHHHHHHHHhCCCceE
Q 017868          183 TNVLIMGAGPIGLVTMLGAPRAFGAPRIVIVDVDDYRLS-VAKEIGA---DNIVKVSTNLQDIAEEVEKIQKAMGTGIDV  258 (365)
Q Consensus       183 ~~vlI~G~g~~G~~ai~~l~~~~g~~~vi~v~~~~~~~~-~~~~~g~---~~~~~~~~~~~~~~~~i~~~~~~~~~~~d~  258 (365)
                      -+|.|+|+|.+|...+..+.+..+++.+.++++++++.+ +++++|.   ....      .++.+.+.      ...+|+
T Consensus         7 ~~vgiiG~G~ig~~~~~~l~~~~~~~lv~v~d~~~~~~~~~a~~~~~~~~~~~~------~~~~~ll~------~~~~D~   74 (362)
T 1ydw_A            7 IRIGVMGCADIARKVSRAIHLAPNATISGVASRSLEKAKAFATANNYPESTKIH------GSYESLLE------DPEIDA   74 (362)
T ss_dssp             EEEEEESCCTTHHHHHHHHHHCTTEEEEEEECSSHHHHHHHHHHTTCCTTCEEE------SSHHHHHH------CTTCCE
T ss_pred             eEEEEECchHHHHHHHHHHhhCCCcEEEEEEcCCHHHHHHHHHHhCCCCCCeee------CCHHHHhc------CCCCCE
Confidence            368899999999877774544446655566677777654 5677774   2221      23333321      357999


Q ss_pred             EEeCCCCHHHHHHHHHhcccCCEEEEE
Q 017868          259 SFDCAGLNKTMSTALGATCAGGKVCLV  285 (365)
Q Consensus       259 vid~~g~~~~~~~~~~~l~~~G~~~~~  285 (365)
                      |+.|+....+...+..++..+ +-+++
T Consensus        75 V~i~tp~~~h~~~~~~al~aG-k~V~~  100 (362)
T 1ydw_A           75 LYVPLPTSLHVEWAIKAAEKG-KHILL  100 (362)
T ss_dssp             EEECCCGGGHHHHHHHHHTTT-CEEEE
T ss_pred             EEEcCChHHHHHHHHHHHHCC-CeEEE
Confidence            999998776777777777755 44444

>2a9f_A Putative malic enzyme ((S)-malate:NAD+ oxidoreductase (decarboxylating)); hypothetical protein, structural genomics, PSI; 2.50A {Streptococcus pyogenes}

Probab=93.54  E-value=0.26  Score=44.40  Aligned_cols=101  Identities=17%  Similarity=0.199  Sum_probs=63.6

Q ss_pred             HHhcCCC-CCCEEEEEcCCHHHHHHHHHHHHHCCCCeEEEEeCCh----h--------HHHHHHHcCCCEEEeCCCCccc
Q 017868          174 CRRANIG-PETNVLIMGAGPIGLVTMLGAPRAFGAPRIVIVDVDD----Y--------RLSVAKEIGADNIVKVSTNLQD  240 (365)
Q Consensus       174 ~~~~~~~-~g~~vlI~G~g~~G~~ai~~l~~~~g~~~vi~v~~~~----~--------~~~~~~~~g~~~~~~~~~~~~~  240 (365)
                      ++..+.+ +..+|+|.|+|..|..+++ ++..+|+++|+.+|++-    .        +..+++....      .....+
T Consensus       179 l~l~g~~l~d~kVVi~GAGaAG~~iA~-ll~~~Ga~~I~v~D~~Gli~~~R~~~L~~~k~~fa~~~~~------~~~~~~  251 (398)
T 2a9f_A          179 LKLLKKSLDEVSIVVNGGGSAGLSITR-KLLAAGATKVTVVDKFGIINEQEAAQLAPHHLDIAKVTNR------EFKSGT  251 (398)
T ss_dssp             HHTTTCCTTSCEEEEECCSHHHHHHHH-HHHHHTCCEEEEEETTEECCTTCCCSCCC---CHHHHHSC------TTCCCS
T ss_pred             HHHhCCCCCccEEEEECCCHHHHHHHH-HHHHcCCCeEEEEECCCcccCCccccchHHHHHHhhccCc------ccchhh
Confidence            4443333 4578999999999999999 66677998999998752    1        2223322110      011223


Q ss_pred             HHHHHHHHHHHhCCCceEEEeCCCCHHHHHHHHHhcccCCEEEEEccCC
Q 017868          241 IAEEVEKIQKAMGTGIDVSFDCAGLNKTMSTALGATCAGGKVCLVGMGH  289 (365)
Q Consensus       241 ~~~~i~~~~~~~~~~~d~vid~~g~~~~~~~~~~~l~~~G~~~~~g~~~  289 (365)
                      +.+.++        ++|++|.+++........++.|+++..++.++.+.
T Consensus       252 L~eav~--------~ADV~IG~Sapgl~T~EmVk~Ma~~pIIfalsNPt  292 (398)
T 2a9f_A          252 LEDALE--------GADIFIGVSAPGVLKAEWISKMAARPVIFAMANPI  292 (398)
T ss_dssp             CSHHHH--------TTCSEEECCSTTCCCHHHHHTSCSSCEEEECCSSS
T ss_pred             HHHHhc--------cCCEEEecCCCCCCCHHHHHhhCCCCEEEECCCCC
Confidence            333332        47999998773333346778899888887776544

>2aef_A Calcium-gated potassium channel MTHK; rossmann fold, helix-turn-helix, Ca2+ binding, flexible interface; 1.70A {Methanothermobacterthermautotrophicus} PDB: 2aej_A 2aem_A 3rbx_A 2ogu_A 2fy8_A 3kxd_A

Probab=93.52  E-value=0.68  Score=38.51  Aligned_cols=95  Identities=16%  Similarity=0.152  Sum_probs=58.1

Q ss_pred             CCCCEEEEEcCCHHHHHHHHHHHHHCCCCeEEEEeCChhHHHHHHHcCCCEEEeCCCCcccHHHHHHHHHHHhCCCceEE
Q 017868          180 GPETNVLIMGAGPIGLVTMLGAPRAFGAPRIVIVDVDDYRLSVAKEIGADNIVKVSTNLQDIAEEVEKIQKAMGTGIDVS  259 (365)
Q Consensus       180 ~~g~~vlI~G~g~~G~~ai~~l~~~~g~~~vi~v~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~i~~~~~~~~~~~d~v  259 (365)
                      ....+++|.|+|.+|..+++ .+...|.  |+++++++++.+.+. .+.. ++.-+.  .+. +.+++   ..-.++|.+
T Consensus         7 ~~~~~viI~G~G~~G~~la~-~L~~~g~--v~vid~~~~~~~~~~-~~~~-~i~gd~--~~~-~~l~~---a~i~~ad~v   75 (234)
T 2aef_A            7 AKSRHVVICGWSESTLECLR-ELRGSEV--FVLAEDENVRKKVLR-SGAN-FVHGDP--TRV-SDLEK---ANVRGARAV   75 (234)
T ss_dssp             ---CEEEEESCCHHHHHHHH-HSTTSEE--EEEESCGGGHHHHHH-TTCE-EEESCT--TCH-HHHHH---TTCTTCSEE
T ss_pred             CCCCEEEEECCChHHHHHHH-HHHhCCe--EEEEECCHHHHHHHh-cCCe-EEEcCC--CCH-HHHHh---cCcchhcEE
Confidence            45578999999999999998 5556676  778888888877766 5643 333222  221 22222   223589999


Q ss_pred             EeCCCCHHH---HHHHHHhcccCCEEEEE
Q 017868          260 FDCAGLNKT---MSTALGATCAGGKVCLV  285 (365)
Q Consensus       260 id~~g~~~~---~~~~~~~l~~~G~~~~~  285 (365)
                      +-+++....   .....+.+.+..+++..
T Consensus        76 i~~~~~d~~n~~~~~~a~~~~~~~~iia~  104 (234)
T 2aef_A           76 IVDLESDSETIHCILGIRKIDESVRIIAE  104 (234)
T ss_dssp             EECCSCHHHHHHHHHHHHHHCSSSEEEEE
T ss_pred             EEcCCCcHHHHHHHHHHHHHCCCCeEEEE
Confidence            999886522   12334445565566554

>3i23_A Oxidoreductase, GFO/IDH/MOCA family; structural genomics, PSI-2, protein structure initiative, northeast structural genomics consortium; 2.30A {Enterococcus faecalis} PDB: 3fd8_A* 3hnp_A

Probab=93.52  E-value=0.093  Score=46.97  Aligned_cols=130  Identities=15%  Similarity=0.132  Sum_probs=74.4

Q ss_pred             EEEEEcCCHHHH-HHHHHHHHHCCCCeEEEEeCChhHHHHHHHcCCCEEEeCCCCcccHHHHHHHHHHHhCCCceEEEeC
Q 017868          184 NVLIMGAGPIGL-VTMLGAPRAFGAPRIVIVDVDDYRLSVAKEIGADNIVKVSTNLQDIAEEVEKIQKAMGTGIDVSFDC  262 (365)
Q Consensus       184 ~vlI~G~g~~G~-~ai~~l~~~~g~~~vi~v~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~i~~~~~~~~~~~d~vid~  262 (365)
                      +|.|+|+|.+|. ..+..+.+.-+++.+.+++++ ...+++++++...+..+    .++.+.+.      ...+|+|+.|
T Consensus         4 rvgiiG~G~~g~~~~~~~l~~~~~~~l~av~d~~-~~~~~a~~~~~~~~~~~----~~~~~ll~------~~~~D~V~i~   72 (349)
T 3i23_A            4 KMGFIGFGKSANRYHLPYVMIRETLEVKTIFDLH-VNEKAAAPFKEKGVNFT----ADLNELLT------DPEIELITIC   72 (349)
T ss_dssp             EEEEECCSHHHHHTTHHHHTTCTTEEEEEEECTT-CCHHHHHHHHTTTCEEE----SCTHHHHS------CTTCCEEEEC
T ss_pred             EEEEEccCHHHHHHHHHHHhhCCCeEEEEEECCC-HHHHHHHhhCCCCCeEE----CCHHHHhc------CCCCCEEEEe
Confidence            688999999998 666634444466444445544 44556666432211122    23333321      3579999999


Q ss_pred             CCCHHHHHHHHHhcccCCEEEEEccCCCCccccchH-------hhhcCcEEEee--cccCCcHHHHHHHHHcCCC
Q 017868          263 AGLNKTMSTALGATCAGGKVCLVGMGHHEMTVPLTP-------AAVREVDVVGV--FRYKNTWPLCLELLRSGKI  328 (365)
Q Consensus       263 ~g~~~~~~~~~~~l~~~G~~~~~g~~~~~~~~~~~~-------~~~~~~~i~~~--~~~~~~~~~~~~~l~~g~~  328 (365)
                      +....+.+.+..+|..+ +-+++.   .+.......       .-.+++.+.-.  ..+...++.+.+++++|.+
T Consensus        73 tp~~~h~~~~~~al~aG-k~Vl~E---KP~a~~~~e~~~l~~~a~~~g~~~~v~~~~r~~p~~~~~~~~i~~g~i  143 (349)
T 3i23_A           73 TPAHTHYDLAKQAILAG-KSVIVE---KPFCDTLEHAEELFALGQEKGVVVMPYQNRRFDGDYLAMKQVVEQGFL  143 (349)
T ss_dssp             SCGGGHHHHHHHHHHTT-CEEEEC---SCSCSSHHHHHHHHHHHHHTTCCEEECCGGGGCHHHHHHHHHHHHTTT
T ss_pred             CCcHHHHHHHHHHHHcC-CEEEEE---CCCcCCHHHHHHHHHHHHHcCCeEEEEecccCCHHHHHHHHHHhcCCC
Confidence            99877888888888855 445552   221111111       12233333222  2235567888899999887

>3e23_A Uncharacterized protein RPA2492; alpha-beta protein, structural genomics, PSI-2, protein structure initiative; HET: SAM; 1.60A {Rhodopseudomonas palustris}

Probab=93.50  E-value=0.23  Score=40.58  Aligned_cols=94  Identities=16%  Similarity=0.135  Sum_probs=62.5

Q ss_pred             cCCCCCCEEEEEcCCHHHHHHHHHHHHHCCCCeEEEEeCChhHHHHHHHc-CCCEEEeCCCCcccHHHHHHHHHHHhCCC
Q 017868          177 ANIGPETNVLIMGAGPIGLVTMLGAPRAFGAPRIVIVDVDDYRLSVAKEI-GADNIVKVSTNLQDIAEEVEKIQKAMGTG  255 (365)
Q Consensus       177 ~~~~~g~~vlI~G~g~~G~~ai~~l~~~~g~~~vi~v~~~~~~~~~~~~~-g~~~~~~~~~~~~~~~~~i~~~~~~~~~~  255 (365)
                      ..+.++.+||-.|+|. |..+.. +++. |. .+++++.+++..+.+++. +.... ..  +..++.         ....
T Consensus        39 ~~~~~~~~vLDiGcG~-G~~~~~-l~~~-~~-~v~~vD~s~~~~~~a~~~~~~~~~-~~--d~~~~~---------~~~~  102 (211)
T 3e23_A           39 GELPAGAKILELGCGA-GYQAEA-MLAA-GF-DVDATDGSPELAAEASRRLGRPVR-TM--LFHQLD---------AIDA  102 (211)
T ss_dssp             TTSCTTCEEEESSCTT-SHHHHH-HHHT-TC-EEEEEESCHHHHHHHHHHHTSCCE-EC--CGGGCC---------CCSC
T ss_pred             HhcCCCCcEEEECCCC-CHHHHH-HHHc-CC-eEEEECCCHHHHHHHHHhcCCceE-Ee--eeccCC---------CCCc
Confidence            4567888999888754 666666 5554 77 799999999888877664 44322 11  111110         1578


Q ss_pred             ceEEEeCCC--------CHHHHHHHHHhcccCCEEEEEc
Q 017868          256 IDVSFDCAG--------LNKTMSTALGATCAGGKVCLVG  286 (365)
Q Consensus       256 ~d~vid~~g--------~~~~~~~~~~~l~~~G~~~~~g  286 (365)
                      +|+|+....        ....+..+.+.|+++|.+++.-
T Consensus       103 fD~v~~~~~l~~~~~~~~~~~l~~~~~~LkpgG~l~~~~  141 (211)
T 3e23_A          103 YDAVWAHACLLHVPRDELADVLKLIWRALKPGGLFYASY  141 (211)
T ss_dssp             EEEEEECSCGGGSCHHHHHHHHHHHHHHEEEEEEEEEEE
T ss_pred             EEEEEecCchhhcCHHHHHHHHHHHHHhcCCCcEEEEEE
Confidence            999997432        1246678888999999988763

>2gcg_A Glyoxylate reductase/hydroxypyruvate reductase; NAD(P) rossmann fold, formate/glycerate dehydrogenase substr binding domain, oxidoreductase; HET: NDP; 2.20A {Homo sapiens} PDB: 2wwr_A 2h1s_A 2q50_A

Probab=93.49  E-value=0.23  Score=43.99  Aligned_cols=88  Identities=17%  Similarity=0.156  Sum_probs=57.9

Q ss_pred             CCCEEEEEcCCHHHHHHHHHHHHHCCCCeEEEEeCChhHHHHHHHcCCCEEEeCCCCcccHHHHHHHHHHHhCCCceEEE
Q 017868          181 PETNVLIMGAGPIGLVTMLGAPRAFGAPRIVIVDVDDYRLSVAKEIGADNIVKVSTNLQDIAEEVEKIQKAMGTGIDVSF  260 (365)
Q Consensus       181 ~g~~vlI~G~g~~G~~ai~~l~~~~g~~~vi~v~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~i~~~~~~~~~~~d~vi  260 (365)
                      .|.+|.|+|.|.+|..+++ .++..|. .|++.+++.++.+.+.++|+...        ++.+.+        ...|+|+
T Consensus       154 ~g~~vgIIG~G~iG~~iA~-~l~~~G~-~V~~~d~~~~~~~~~~~~g~~~~--------~l~e~l--------~~aDvVi  215 (330)
T 2gcg_A          154 TQSTVGIIGLGRIGQAIAR-RLKPFGV-QRFLYTGRQPRPEEAAEFQAEFV--------STPELA--------AQSDFIV  215 (330)
T ss_dssp             TTCEEEEECCSHHHHHHHH-HHGGGTC-CEEEEESSSCCHHHHHTTTCEEC--------CHHHHH--------HHCSEEE
T ss_pred             CCCEEEEECcCHHHHHHHH-HHHHCCC-EEEEECCCCcchhHHHhcCceeC--------CHHHHH--------hhCCEEE
Confidence            4678999999999999999 6678899 47788876655555555554321        222222        2478888


Q ss_pred             eCCCCHH----HH-HHHHHhcccCCEEEEEc
Q 017868          261 DCAGLNK----TM-STALGATCAGGKVCLVG  286 (365)
Q Consensus       261 d~~g~~~----~~-~~~~~~l~~~G~~~~~g  286 (365)
                      .++....    .+ ...+..++++..++..+
T Consensus       216 ~~vp~~~~t~~~i~~~~~~~mk~gailIn~s  246 (330)
T 2gcg_A          216 VACSLTPATEGLCNKDFFQKMKETAVFINIS  246 (330)
T ss_dssp             ECCCCCTTTTTCBSHHHHHHSCTTCEEEECS
T ss_pred             EeCCCChHHHHhhCHHHHhcCCCCcEEEECC
Confidence            8776421    11 24556777777776654

>4e4y_A Short chain dehydrogenase family protein; structural genomics, the center for structural genomics of I diseases, csgid, niaid; 1.80A {Francisella tularensis subsp}

Probab=93.46  E-value=0.073  Score=44.87  Aligned_cols=75  Identities=21%  Similarity=0.254  Sum_probs=44.1

Q ss_pred             CCCEEEEEcC-CHHHHHHHHHHHHHCCCCeEEEEeCChh-HHHHHHHcCCCEEEeCCCCc-ccHHHHHHHHHHHhCCCce
Q 017868          181 PETNVLIMGA-GPIGLVTMLGAPRAFGAPRIVIVDVDDY-RLSVAKEIGADNIVKVSTNL-QDIAEEVEKIQKAMGTGID  257 (365)
Q Consensus       181 ~g~~vlI~G~-g~~G~~ai~~l~~~~g~~~vi~v~~~~~-~~~~~~~~g~~~~~~~~~~~-~~~~~~i~~~~~~~~~~~d  257 (365)
                      ++.++||+|+ +++|.++++.+++..|+ +|+.++++++ ..+      ....+..+-.+ ++..+.+ +..+  ..++|
T Consensus         3 ~~k~vlITGas~gIG~~~a~~l~~~~g~-~v~~~~~~~~~~~~------~~~~~~~Dv~~~~~v~~~~-~~~~--~~~id   72 (244)
T 4e4y_A            3 AMANYLVTGGSKGIGKAVVELLLQNKNH-TVINIDIQQSFSAE------NLKFIKADLTKQQDITNVL-DIIK--NVSFD   72 (244)
T ss_dssp             CCEEEEEETTTSHHHHHHHHHHTTSTTE-EEEEEESSCCCCCT------TEEEEECCTTCHHHHHHHH-HHTT--TCCEE
T ss_pred             CCCeEEEeCCCChHHHHHHHHHHhcCCc-EEEEeccccccccc------cceEEecCcCCHHHHHHHH-HHHH--hCCCC
Confidence            4678999987 99999999856654577 6777766554 211      11222222222 2222222 2211  35899


Q ss_pred             EEEeCCCC
Q 017868          258 VSFDCAGL  265 (365)
Q Consensus       258 ~vid~~g~  265 (365)
                      ++|.++|.
T Consensus        73 ~lv~nAg~   80 (244)
T 4e4y_A           73 GIFLNAGI   80 (244)
T ss_dssp             EEEECCCC
T ss_pred             EEEECCcc
Confidence            99998884

>3dli_A Methyltransferase; PSI-II, NYSGXRC, structural genomics, protein structure initiative; 2.46A {Archaeoglobus fulgidus}

Probab=93.46  E-value=0.52  Score=39.31  Aligned_cols=96  Identities=17%  Similarity=0.132  Sum_probs=63.8

Q ss_pred             CCCCCCEEEEEcCCHHHHHHHHHHHHHCCCCeEEEEeCChhHHHHHHHcCCCEEEeCCCCcccHHHHHHHHHHHhCCCce
Q 017868          178 NIGPETNVLIMGAGPIGLVTMLGAPRAFGAPRIVIVDVDDYRLSVAKEIGADNIVKVSTNLQDIAEEVEKIQKAMGTGID  257 (365)
Q Consensus       178 ~~~~g~~vlI~G~g~~G~~ai~~l~~~~g~~~vi~v~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~i~~~~~~~~~~~d  257 (365)
                      .++++.+||=.|+|. |..+.. +++. |. .+++++.+++..+.+++.  ...+.     .+..+.+..   ...+.+|
T Consensus        38 ~~~~~~~vLDiGcG~-G~~~~~-l~~~-~~-~v~gvD~s~~~~~~a~~~--~~~~~-----~d~~~~~~~---~~~~~fD  103 (240)
T 3dli_A           38 YFKGCRRVLDIGCGR-GEFLEL-CKEE-GI-ESIGVDINEDMIKFCEGK--FNVVK-----SDAIEYLKS---LPDKYLD  103 (240)
T ss_dssp             GTTTCSCEEEETCTT-THHHHH-HHHH-TC-CEEEECSCHHHHHHHHTT--SEEEC-----SCHHHHHHT---SCTTCBS
T ss_pred             hhcCCCeEEEEeCCC-CHHHHH-HHhC-CC-cEEEEECCHHHHHHHHhh--cceee-----ccHHHHhhh---cCCCCee
Confidence            357889999998754 555555 5555 77 589999999998888776  22222     122222111   1246899


Q ss_pred             EEEeCC-----CC---HHHHHHHHHhcccCCEEEEEcc
Q 017868          258 VSFDCA-----GL---NKTMSTALGATCAGGKVCLVGM  287 (365)
Q Consensus       258 ~vid~~-----g~---~~~~~~~~~~l~~~G~~~~~g~  287 (365)
                      +|+...     ..   ...+..+.++|+++|.+++...
T Consensus       104 ~i~~~~~l~~~~~~~~~~~l~~~~~~LkpgG~l~~~~~  141 (240)
T 3dli_A          104 GVMISHFVEHLDPERLFELLSLCYSKMKYSSYIVIESP  141 (240)
T ss_dssp             EEEEESCGGGSCGGGHHHHHHHHHHHBCTTCCEEEEEE
T ss_pred             EEEECCchhhCCcHHHHHHHHHHHHHcCCCcEEEEEeC
Confidence            998632     21   3567788899999999987643

>3fhl_A Putative oxidoreductase; NAD-binding domain, PSI-2, NYSGXRC, structur genomics, protein structure initiative; 1.93A {Bacteroides fragilis nctc 9343}

Probab=93.46  E-value=0.15  Score=45.79  Aligned_cols=128  Identities=16%  Similarity=0.047  Sum_probs=76.0

Q ss_pred             CEEEEEcCCHHHHH-HHHHHHHHCCCCeEEEEeCChhHHHHHHHcCCCEEEeCCCCcccHHHHHHHHHHHhCCCceEEEe
Q 017868          183 TNVLIMGAGPIGLV-TMLGAPRAFGAPRIVIVDVDDYRLSVAKEIGADNIVKVSTNLQDIAEEVEKIQKAMGTGIDVSFD  261 (365)
Q Consensus       183 ~~vlI~G~g~~G~~-ai~~l~~~~g~~~vi~v~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~i~~~~~~~~~~~d~vid  261 (365)
                      -+|.|+|+|.+|.. .+..+.+.-+++.+.++++++++  ..++++.....      .++.+.+.      ...+|+|+.
T Consensus         6 ~rvgiiG~G~~g~~~~~~~l~~~~~~~l~av~d~~~~~--~~~~~~~~~~~------~~~~~ll~------~~~vD~V~i   71 (362)
T 3fhl_A            6 IKTGLAAFGMSGQVFHAPFISTNPHFELYKIVERSKEL--SKERYPQASIV------RSFKELTE------DPEIDLIVV   71 (362)
T ss_dssp             EEEEESCCSHHHHHTTHHHHHHCTTEEEEEEECSSCCG--GGTTCTTSEEE------SCSHHHHT------CTTCCEEEE
T ss_pred             eEEEEECCCHHHHHHHHHHHhhCCCeEEEEEEcCCHHH--HHHhCCCCceE------CCHHHHhc------CCCCCEEEE
Confidence            36888999999985 66635444577555566666665  34556433332      23333331      357999999


Q ss_pred             CCCCHHHHHHHHHhcccCCEEEEEccCCCCccccch---H----hhhcCcEEE-ee-cccCCcHHHHHHHHHcCCC
Q 017868          262 CAGLNKTMSTALGATCAGGKVCLVGMGHHEMTVPLT---P----AAVREVDVV-GV-FRYKNTWPLCLELLRSGKI  328 (365)
Q Consensus       262 ~~g~~~~~~~~~~~l~~~G~~~~~g~~~~~~~~~~~---~----~~~~~~~i~-~~-~~~~~~~~~~~~~l~~g~~  328 (365)
                      |+....+...+..+|..+=+ +++.-   +......   .    .-.+++.+. +. ..+...++.+.+++++|.+
T Consensus        72 ~tp~~~H~~~~~~al~aGkh-Vl~EK---P~a~~~~ea~~l~~~a~~~g~~~~v~~~~R~~p~~~~~k~~i~~G~i  143 (362)
T 3fhl_A           72 NTPDNTHYEYAGMALEAGKN-VVVEK---PFTSTTKQGEELIALAKKKGLMLSVYQNRRWDADFLTVRDILAKSLL  143 (362)
T ss_dssp             CSCGGGHHHHHHHHHHTTCE-EEEES---SCCSSHHHHHHHHHHHHHHTCCEEEECGGGGSHHHHHHHHHHHTTTT
T ss_pred             eCChHHHHHHHHHHHHCCCe-EEEec---CCCCCHHHHHHHHHHHHHcCCEEEEEecceeCHHHHHHHHHHHcCCC
Confidence            99988788888888886544 44421   1111111   1    112233332 22 2346678889999999887

>1p9l_A Dihydrodipicolinate reductase; oxidoreductase, lysine biosynthesis, NADH binding specificity, TB structural genomics consortium; HET: NAD PDC PG4; 2.30A {Mycobacterium tuberculosis} SCOP: c.2.1.3 d.81.1.3 PDB: 1c3v_A* 1yl5_A 1yl7_A* 1yl6_A*

Probab=93.44  E-value=1.3  Score=37.29  Aligned_cols=79  Identities=15%  Similarity=0.222  Sum_probs=50.3

Q ss_pred             EEEEEcC-CHHHHHHHHHHHHHCCCCeEEEEeCChhHHHHHHHcCCCEEEeCCCCcccHHHHHHHHHHHhCCCceEEEeC
Q 017868          184 NVLIMGA-GPIGLVTMLGAPRAFGAPRIVIVDVDDYRLSVAKEIGADNIVKVSTNLQDIAEEVEKIQKAMGTGIDVSFDC  262 (365)
Q Consensus       184 ~vlI~G~-g~~G~~ai~~l~~~~g~~~vi~v~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~i~~~~~~~~~~~d~vid~  262 (365)
                      +|+|.|+ |.+|..+++.+.+..+.+.+.++++.+.-.+++ ..+++.++++... ....+.++...   ..+.++|+.+
T Consensus         2 kV~V~Ga~G~mG~~i~~~~~~~~~~elva~~d~~~dl~~~~-~~~~DvvIDfT~p-~a~~~~~~~a~---~~g~~~VigT   76 (245)
T 1p9l_A            2 RVGVLGAKGKVGTTMVRAVAAADDLTLSAELDAGDPLSLLT-DGNTEVVIDFTHP-DVVMGNLEFLI---DNGIHAVVGT   76 (245)
T ss_dssp             EEEEETTTSHHHHHHHHHHHHCTTCEEEEEECTTCCTHHHH-HTTCCEEEECSCT-TTHHHHHHHHH---HTTCEEEECC
T ss_pred             EEEEECCCCHHHHHHHHHHHhCCCCEEEEEEccCCCHHHHh-ccCCcEEEEccCh-HHHHHHHHHHH---HcCCCEEEcC
Confidence            6889997 999999999443344776555555443322233 2467888877643 34444444433   3689999999


Q ss_pred             CCCHH
Q 017868          263 AGLNK  267 (365)
Q Consensus       263 ~g~~~  267 (365)
                      +|-..
T Consensus        77 TG~~~   81 (245)
T 1p9l_A           77 TGFTA   81 (245)
T ss_dssp             CCCCH
T ss_pred             CCCCH
Confidence            88543

>3gg9_A D-3-phosphoglycerate dehydrogenase oxidoreductase; structural genomics, PSI-2, P structure initiative; 1.90A {Ralstonia solanacearum}

Probab=93.42  E-value=0.23  Score=44.45  Aligned_cols=88  Identities=18%  Similarity=0.126  Sum_probs=60.4

Q ss_pred             CCCEEEEEcCCHHHHHHHHHHHHHCCCCeEEEEeCChhHHHHHHHcCCCEEEeCCCCcccHHHHHHHHHHHhCCCceEEE
Q 017868          181 PETNVLIMGAGPIGLVTMLGAPRAFGAPRIVIVDVDDYRLSVAKEIGADNIVKVSTNLQDIAEEVEKIQKAMGTGIDVSF  260 (365)
Q Consensus       181 ~g~~vlI~G~g~~G~~ai~~l~~~~g~~~vi~v~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~i~~~~~~~~~~~d~vi  260 (365)
                      .|.+|.|+|.|.+|..+++ .++.+|+ .|++.+++. +.+.+.+.|+..+       .++.+.+        ...|+|+
T Consensus       159 ~g~tvGIIGlG~IG~~vA~-~l~~~G~-~V~~~d~~~-~~~~~~~~g~~~~-------~~l~ell--------~~aDiV~  220 (352)
T 3gg9_A          159 KGQTLGIFGYGKIGQLVAG-YGRAFGM-NVLVWGREN-SKERARADGFAVA-------ESKDALF--------EQSDVLS  220 (352)
T ss_dssp             TTCEEEEECCSHHHHHHHH-HHHHTTC-EEEEECSHH-HHHHHHHTTCEEC-------SSHHHHH--------HHCSEEE
T ss_pred             CCCEEEEEeECHHHHHHHH-HHHhCCC-EEEEECCCC-CHHHHHhcCceEe-------CCHHHHH--------hhCCEEE
Confidence            4789999999999999999 7789999 688887764 4455666776421       1332222        2478888


Q ss_pred             eCCCCHH-----HHHHHHHhcccCCEEEEEc
Q 017868          261 DCAGLNK-----TMSTALGATCAGGKVCLVG  286 (365)
Q Consensus       261 d~~g~~~-----~~~~~~~~l~~~G~~~~~g  286 (365)
                      -++....     .-...+..|+++..++.++
T Consensus       221 l~~Plt~~t~~li~~~~l~~mk~gailIN~a  251 (352)
T 3gg9_A          221 VHLRLNDETRSIITVADLTRMKPTALFVNTS  251 (352)
T ss_dssp             ECCCCSTTTTTCBCHHHHTTSCTTCEEEECS
T ss_pred             EeccCcHHHHHhhCHHHHhhCCCCcEEEECC
Confidence            7664221     1125677888888888876

>2et6_A (3R)-hydroxyacyl-COA dehydrogenase; MFE-2, beta-oxidation, peroxisome, SDR, oxido; 2.22A {Candida tropicalis}

Probab=93.41  E-value=0.49  Score=45.67  Aligned_cols=80  Identities=25%  Similarity=0.327  Sum_probs=48.5

Q ss_pred             CCCEEEEEcC-CHHHHHHHHHHHHHCCCCeEEEEeCCh---------hHH----HHHHHcCCCEEEeCCCCcccHHHHHH
Q 017868          181 PETNVLIMGA-GPIGLVTMLGAPRAFGAPRIVIVDVDD---------YRL----SVAKEIGADNIVKVSTNLQDIAEEVE  246 (365)
Q Consensus       181 ~g~~vlI~G~-g~~G~~ai~~l~~~~g~~~vi~v~~~~---------~~~----~~~~~~g~~~~~~~~~~~~~~~~~i~  246 (365)
                      .|+++||+|+ +++|.+.+..++ ..|+ +|++++++.         ++.    +.+++.|...+.+.. +..+....++
T Consensus         7 ~gkvalVTGas~GIG~a~A~~la-~~Ga-~Vv~~~~~~~~~~~gr~~~~~~~~~~~i~~~g~~~~~d~~-d~~~~~~~v~   83 (604)
T 2et6_A            7 KDKVVIITGAGGGLGKYYSLEFA-KLGA-KVVVNDLGGALNGQGGNSKAADVVVDEIVKNGGVAVADYN-NVLDGDKIVE   83 (604)
T ss_dssp             TTCEEEETTTTSHHHHHHHHHHH-HTTC-EEEEECC-----------CHHHHHHHHHHHTTCEEEEECC-CTTCHHHHHH
T ss_pred             CCCEEEEeCCCcHHHHHHHHHHH-HcCC-EEEEEeCCccccccccchHHHHHHHHHHHhcCCeEEEEcC-CHHHHHHHHH
Confidence            4678899987 899999999554 5699 566665432         222    223334544444433 2334444455


Q ss_pred             HHHHHhCCCceEEEeCCC
Q 017868          247 KIQKAMGTGIDVSFDCAG  264 (365)
Q Consensus       247 ~~~~~~~~~~d~vid~~g  264 (365)
                      +..+.. +.+|++|+++|
T Consensus        84 ~~~~~~-G~iDiLVnNAG  100 (604)
T 2et6_A           84 TAVKNF-GTVHVIINNAG  100 (604)
T ss_dssp             HHHHHH-SCCCEEEECCC
T ss_pred             HHHHHc-CCCCEEEECCC
Confidence            444433 57999999988

>4e21_A 6-phosphogluconate dehydrogenase (decarboxylating; structural genomics, PSI-biology, NEW YORK structural genomi research consortium; 2.30A {Geobacter metallireducens}

Probab=93.37  E-value=0.78  Score=41.10  Aligned_cols=45  Identities=18%  Similarity=0.261  Sum_probs=36.3

Q ss_pred             CCEEEEEcCCHHHHHHHHHHHHHCCCCeEEEEeCChhHHHHHHHcCC
Q 017868          182 ETNVLIMGAGPIGLVTMLGAPRAFGAPRIVIVDVDDYRLSVAKEIGA  228 (365)
Q Consensus       182 g~~vlI~G~g~~G~~ai~~l~~~~g~~~vi~v~~~~~~~~~~~~~g~  228 (365)
                      ..+|.|+|.|.+|..++. .+...|. .|.+.++++++.+.+.+.|+
T Consensus        22 ~mkIgiIGlG~mG~~~A~-~L~~~G~-~V~v~dr~~~~~~~l~~~g~   66 (358)
T 4e21_A           22 SMQIGMIGLGRMGADMVR-RLRKGGH-ECVVYDLNVNAVQALEREGI   66 (358)
T ss_dssp             CCEEEEECCSHHHHHHHH-HHHHTTC-EEEEECSCHHHHHHHHTTTC
T ss_pred             CCEEEEECchHHHHHHHH-HHHhCCC-EEEEEeCCHHHHHHHHHCCC
Confidence            468999999999999888 5456687 68888999988887766664

>3mgg_A Methyltransferase; NYSGXRC, PSI-II, protein structure initiative, structural genomics, NEW YORK SGX research center for structural genomics; 1.86A {Methanosarcina mazei}

Probab=93.37  E-value=0.19  Score=43.00  Aligned_cols=101  Identities=20%  Similarity=0.311  Sum_probs=64.4

Q ss_pred             hcCCCCCCEEEEEcCCHHHHHHHHHHHHHCCCCeEEEEeCChhHHHHHHH----cCCCEEEeCCCCcccHHHHHHHHHHH
Q 017868          176 RANIGPETNVLIMGAGPIGLVTMLGAPRAFGAPRIVIVDVDDYRLSVAKE----IGADNIVKVSTNLQDIAEEVEKIQKA  251 (365)
Q Consensus       176 ~~~~~~g~~vlI~G~g~~G~~ai~~l~~~~g~~~vi~v~~~~~~~~~~~~----~g~~~~~~~~~~~~~~~~~i~~~~~~  251 (365)
                      ...+.++.+||-.|+|. |..+.. +++......+++++.++...+.+++    .+...+.....+..++.        .
T Consensus        32 ~~~~~~~~~vLDiG~G~-G~~~~~-l~~~~~~~~v~~vD~s~~~~~~a~~~~~~~~~~~~~~~~~d~~~~~--------~  101 (276)
T 3mgg_A           32 DTVYPPGAKVLEAGCGI-GAQTVI-LAKNNPDAEITSIDISPESLEKARENTEKNGIKNVKFLQANIFSLP--------F  101 (276)
T ss_dssp             TCCCCTTCEEEETTCTT-SHHHHH-HHHHCTTSEEEEEESCHHHHHHHHHHHHHTTCCSEEEEECCGGGCC--------S
T ss_pred             cccCCCCCeEEEecCCC-CHHHHH-HHHhCCCCEEEEEECCHHHHHHHHHHHHHcCCCCcEEEEcccccCC--------C
Confidence            35568899999998764 666666 6666533489999999887766544    34432211111111110        1


Q ss_pred             hCCCceEEEeCC------CCHHHHHHHHHhcccCCEEEEEc
Q 017868          252 MGTGIDVSFDCA------GLNKTMSTALGATCAGGKVCLVG  286 (365)
Q Consensus       252 ~~~~~d~vid~~------g~~~~~~~~~~~l~~~G~~~~~g  286 (365)
                      ....+|+|+...      .....+..+.++|+++|.+++..
T Consensus       102 ~~~~fD~v~~~~~l~~~~~~~~~l~~~~~~L~pgG~l~~~~  142 (276)
T 3mgg_A          102 EDSSFDHIFVCFVLEHLQSPEEALKSLKKVLKPGGTITVIE  142 (276)
T ss_dssp             CTTCEEEEEEESCGGGCSCHHHHHHHHHHHEEEEEEEEEEE
T ss_pred             CCCCeeEEEEechhhhcCCHHHHHHHHHHHcCCCcEEEEEE
Confidence            146799998642      22356778889999999998864

>3dxy_A TRNA (guanine-N(7)-)-methyltransferase; rossmann fold methyltransferase, tRNA modification, S-adenosyl-L-methionine, TR processing; HET: SAM; 1.50A {Escherichia coli} PDB: 3dxx_A* 3dxz_A*

Probab=93.37  E-value=0.7  Score=38.12  Aligned_cols=98  Identities=13%  Similarity=0.092  Sum_probs=61.9

Q ss_pred             CCCEEEEEcCCHHHHHHHHHHHHHCCCCeEEEEeCChhHHHHH----HHcCCCEEEeCCCCcccHHHHHHHHHHHhCCCc
Q 017868          181 PETNVLIMGAGPIGLVTMLGAPRAFGAPRIVIVDVDDYRLSVA----KEIGADNIVKVSTNLQDIAEEVEKIQKAMGTGI  256 (365)
Q Consensus       181 ~g~~vlI~G~g~~G~~ai~~l~~~~g~~~vi~v~~~~~~~~~~----~~~g~~~~~~~~~~~~~~~~~i~~~~~~~~~~~  256 (365)
                      ++.+||=.|+|. |..++. +++......|++++.+++..+.+    ++.+...+..+..   |..+.+....  ....+
T Consensus        34 ~~~~vLDiGcG~-G~~~~~-lA~~~p~~~v~giD~s~~~l~~a~~~~~~~~l~nv~~~~~---Da~~~l~~~~--~~~~~  106 (218)
T 3dxy_A           34 EAPVTLEIGFGM-GASLVA-MAKDRPEQDFLGIEVHSPGVGACLASAHEEGLSNLRVMCH---DAVEVLHKMI--PDNSL  106 (218)
T ss_dssp             CCCEEEEESCTT-CHHHHH-HHHHCTTSEEEEECSCHHHHHHHHHHHHHTTCSSEEEECS---CHHHHHHHHS--CTTCE
T ss_pred             CCCeEEEEeeeC-hHHHHH-HHHHCCCCeEEEEEecHHHHHHHHHHHHHhCCCcEEEEEC---CHHHHHHHHc--CCCCh
Confidence            567788788764 667777 66665444899999999866554    3456544333222   3322222211  24678


Q ss_pred             eEEEeCCCC--------------HHHHHHHHHhcccCCEEEEE
Q 017868          257 DVSFDCAGL--------------NKTMSTALGATCAGGKVCLV  285 (365)
Q Consensus       257 d~vid~~g~--------------~~~~~~~~~~l~~~G~~~~~  285 (365)
                      |.|+-....              +..+..+.++|+++|.+.+.
T Consensus       107 d~v~~~~~~p~~~~~~~~rr~~~~~~l~~~~r~LkpGG~l~i~  149 (218)
T 3dxy_A          107 RMVQLFFPDPWHKARHNKRRIVQVPFAELVKSKLQLGGVFHMA  149 (218)
T ss_dssp             EEEEEESCCCCCSGGGGGGSSCSHHHHHHHHHHEEEEEEEEEE
T ss_pred             heEEEeCCCCccchhhhhhhhhhHHHHHHHHHHcCCCcEEEEE
Confidence            888754221              13678888999999998775

---

Homologous Structure Domains

Structure Domains Detected by RPS-BLAST

Original result of RPS-BLAST against SCOP70(version1.75) database

ID	Length	Definition	E-value
Query	365
d1pl8a1	185	b.35.1.2 (A:1-145,A:317-356) Ketose reductase (sor	4e-37
d1pl8a2	171	c.2.1.1 (A:146-316) Ketose reductase (sorbitol deh	1e-33
d1e3ja2	170	c.2.1.1 (A:143-312) Ketose reductase (sorbitol deh	4e-30
d1e3ja1	178	b.35.1.2 (A:4-142,A:313-351) Ketose reductase (sor	5e-30
d1p0fa1	198	b.35.1.2 (A:1001-1163,A:1338-1372) Alcohol dehydro	9e-26
d1piwa1	192	b.35.1.2 (A:1-152,A:321-360) Cinnamyl alcohol dehy	4e-25
d1kola1	201	b.35.1.2 (A:2-160,A:356-397) Formaldehyde dehydrog	1e-24
d1cdoa1	199	b.35.1.2 (A:1-164,A:340-374) Alcohol dehydrogenase	3e-22
d1vj0a1	184	b.35.1.2 (A:2-155,A:338-367) Hypothetical protein	5e-22
d1llua1	175	b.35.1.2 (A:2-143,A:310-342) Alcohol dehydrogenase	2e-21
d1rjwa1	171	b.35.1.2 (A:1-137,A:306-339) Alcohol dehydrogenase	3e-21
d2fzwa1	197	b.35.1.2 (A:1-162,A:339-373) Alcohol dehydrogenase	5e-21
d1e3ia1	202	b.35.1.2 (A:1-167,A:342-376) Alcohol dehydrogenase	5e-21
d1jvba1	177	b.35.1.2 (A:1-143,A:314-347) Alcohol dehydrogenase	8e-21
d1jqba1	177	b.35.1.2 (A:1001-1139,A:1314-1351) Bacterial secon	3e-20
d1uufa1	179	b.35.1.2 (A:3-144,A:313-349) Hypothetical protein	4e-20
d1h2ba1	171	b.35.1.2 (A:17-154,A:327-359) Alcohol dehydrogenas	2e-19
d2jhfa1	198	b.35.1.2 (A:1-163,A:340-374) Alcohol dehydrogenase	3e-17
d1f8fa1	194	b.35.1.2 (A:4-162,A:337-371) Benzyl alcohol dehydr	1e-16
d1kola2	195	c.2.1.1 (A:161-355) Formaldehyde dehydrogenase {Ps	8e-13
d1jqba2	174	c.2.1.1 (A:1140-1313) Bacterial secondary alcohol	4e-12
d1f8fa2	174	c.2.1.1 (A:163-336) Benzyl alcohol dehydrogenase {	4e-12
d1vj0a2	182	c.2.1.1 (A:156-337) Hypothetical protein TM0436 {T	3e-10
d1tt7a1	162	b.35.1.2 (A:2-127,A:295-330) Hypothetical protein	6e-10
d1cdoa2	175	c.2.1.1 (A:165-339) Alcohol dehydrogenase {Cod (Ga	2e-09
d2jhfa2	176	c.2.1.1 (A:164-339) Alcohol dehydrogenase {Horse (	2e-09
d1xa0a1	152	b.35.1.2 (A:1-118,A:295-328) B. subtilis YhfP homo	4e-09
d1h2ba2	172	c.2.1.1 (A:155-326) Alcohol dehydrogenase {Archaeo	5e-09
d1p0fa2	174	c.2.1.1 (A:1164-1337) Alcohol dehydrogenase {Frog	5e-09
d1e3ia2	174	c.2.1.1 (A:168-341) Alcohol dehydrogenase {Mouse (	9e-09
d2fzwa2	176	c.2.1.1 (A:163-338) Alcohol dehydrogenase {Human (	1e-08
d1d1ta2	176	c.2.1.1 (A:163-338) Alcohol dehydrogenase {Human (	2e-08
d1rjwa2	168	c.2.1.1 (A:138-305) Alcohol dehydrogenase {Bacillu	2e-07
d1o89a1	146	b.35.1.2 (A:1-115,A:293-323) Hypothetical protein	1e-06
d1llua2	166	c.2.1.1 (A:144-309) Alcohol dehydrogenase {Pseudom	1e-06
d1jvba2	170	c.2.1.1 (A:144-313) Alcohol dehydrogenase {Archaeo	5e-06
d1piwa2	168	c.2.1.1 (A:153-320) Cinnamyl alcohol dehydrogenase	8e-06
d1gu7a1	175	b.35.1.2 (A:23-160,A:350-386) 2,4-dienoyl-CoA redu	8e-05
d1qora1	147	b.35.1.2 (A:2-112,A:292-327) Quinone oxidoreductas	9e-05
d1uufa2	168	c.2.1.1 (A:145-312) Hypothetical protein YahK {Esc	3e-04
d1yb5a1	150	b.35.1.2 (A:6-120,A:295-329) Quinone oxidoreductas	9e-04
d2d1ya1	248	c.2.1.2 (A:2-249) Hypothetical protein TTHA0369 {T	0.001
d1iz0a1	131	b.35.1.2 (A:1-98,A:270-302) Quinone oxidoreductase	0.002

>d1pl8a1 b.35.1.2 (A:1-145,A:317-356) Ketose reductase (sorbitol dehydrogenase) {Human (Homo sapiens) [TaxId: 9606]} Length = 185

class: All beta proteins
fold: GroES-like
superfamily: GroES-like
family: Alcohol dehydrogenase-like, N-terminal domain
domain: Ketose reductase (sorbitol dehydrogenase)
species: Human (Homo sapiens) [TaxId: 9606]

 Score =  130 bits (327), Expect = 4e-37
 Identities = 78/177 (44%), Positives = 104/177 (58%), Gaps = 2/177 (1%)

Query: 18  NMAAWLLGVNTLKIQPFELPSLGPYDVLVRMKAVGICGSDVHYLKTLRCADFVVKEPMVI 77
           N++  + G   L+++ + +P  GP +VL+RM +VGICGSDVHY +  R  +F+VK+PMV+
Sbjct: 8   NLSLVVHGPGDLRLENYPIPEPGPNEVLLRMHSVGICGSDVHYWEYGRIGNFIVKKPMVL 67

Query: 78  GHECAGVIEKVGSEVKTLVPGDRVALEPGISCWRCDHCKGGRYNLCPEMKFFATPPVHGS 137
           GHE +G +EKVGS VK L PGDRVA+EPG      + CK GRYNL P + F ATPP  G+
Sbjct: 68  GHEASGTVEKVGSSVKHLKPGDRVAIEPGAPRENDEFCKMGRYNLSPSIFFCATPPDDGN 127

Query: 138 LANQVVHPADLCFKLPDNVSLEEGAMCEPLSVGLHACRRANIGPETNVLIMGAGPIG 194
           L     H A  C+KLPDNV         PL   L A      G    +++    P  
Sbjct: 128 LCRFYKHNAAFCYKLPDNVKPLV-THRFPLEKALEAFETFKKGLGLKIML-KCDPSD 182

>d1pl8a2 c.2.1.1 (A:146-316) Ketose reductase (sorbitol dehydrogenase) {Human (Homo sapiens) [TaxId: 9606]} Length = 171

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Alcohol dehydrogenase-like, C-terminal domain
domain: Ketose reductase (sorbitol dehydrogenase)
species: Human (Homo sapiens) [TaxId: 9606]

 Score =  120 bits (302), Expect = 1e-33
 Identities = 77/174 (44%), Positives = 110/174 (63%), Gaps = 3/174 (1%)

Query: 156 VSLEEGAMCEPLSVGLHACRRANIGPETNVLIMGAGPIGLVTMLGAPRAFGAPRIVIVDV 215
           V+ EEGA+ EPLSVG+HACRR  +     VL+ GAGPIG+VT+L A    GA ++V+ D+
Sbjct: 1   VTFEEGALIEPLSVGIHACRRGGVTLGHKVLVCGAGPIGMVTLLVAKA-MGAAQVVVTDL 59

Query: 216 DDYRLSVAKEIGADNIVKVSTNLQDIAEEVEKIQKAMGTGIDVSFDCAGLNKTMSTALGA 275
              RLS AKEIGAD ++++S           + Q  +G   +V+ +C G   ++   + A
Sbjct: 60  SATRLSKAKEIGADLVLQISKESPQEIARKVEGQ--LGCKPEVTIECTGAEASIQAGIYA 117

Query: 276 TCAGGKVCLVGMGHHEMTVPLTPAAVREVDVVGVFRYKNTWPLCLELLRSGKID 329
           T +GG + LVG+G    TVPL  AA+REVD+ GVFRY NTWP+ + +L S  ++
Sbjct: 118 TRSGGTLVLVGLGSEMTTVPLLHAAIREVDIKGVFRYCNTWPVAISMLASKSVN 171

>d1e3ja2 c.2.1.1 (A:143-312) Ketose reductase (sorbitol dehydrogenase) {Silverleaf whitefly (Bemisia argentifolii) [TaxId: 77855]} Length = 170

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Alcohol dehydrogenase-like, C-terminal domain
domain: Ketose reductase (sorbitol dehydrogenase)
species: Silverleaf whitefly (Bemisia argentifolii) [TaxId: 77855]

 Score =  111 bits (278), Expect = 4e-30
 Identities = 77/172 (44%), Positives = 108/172 (62%), Gaps = 2/172 (1%)

Query: 156 VSLEEGAMCEPLSVGLHACRRANIGPETNVLIMGAGPIGLVTMLGAPRAFGAPRIVIVDV 215
           VSLEEGA+ EPLSVG+HACRRA +   T VL++GAGPIGLV++L A        +V    
Sbjct: 1   VSLEEGALLEPLSVGVHACRRAGVQLGTTVLVIGAGPIGLVSVLAAKAYG--AFVVCTAR 58

Query: 216 DDYRLSVAKEIGADNIVKVSTNLQDIAEEVEKIQKAMGTGIDVSFDCAGLNKTMSTALGA 275
              RL VAK  GAD  + V    ++ +  +E+I+ A+G   +V+ DC+G  K ++  +  
Sbjct: 59  SPRRLEVAKNCGADVTLVVDPAKEEESSIIERIRSAIGDLPNVTIDCSGNEKCITIGINI 118

Query: 276 TCAGGKVCLVGMGHHEMTVPLTPAAVREVDVVGVFRYKNTWPLCLELLRSGK 327
           T  GG + LVGMG   +TVPL  A  RE+D+  VFRY N +P+ LE++ SG+
Sbjct: 119 TRTGGTLMLVGMGSQMVTVPLVNACAREIDIKSVFRYCNDYPIALEMVASGR 170

>d1e3ja1 b.35.1.2 (A:4-142,A:313-351) Ketose reductase (sorbitol dehydrogenase) {Silverleaf whitefly (Bemisia argentifolii) [TaxId: 77855]} Length = 178

class: All beta proteins
fold: GroES-like
superfamily: GroES-like
family: Alcohol dehydrogenase-like, N-terminal domain
domain: Ketose reductase (sorbitol dehydrogenase)
species: Silverleaf whitefly (Bemisia argentifolii) [TaxId: 77855]

 Score =  111 bits (278), Expect = 5e-30
 Identities = 80/174 (45%), Positives = 109/174 (62%), Gaps = 1/174 (0%)

Query: 18  NMAAWLLGVNTLKIQPFELPSLGPYDVLVRMKAVGICGSDVHYLKTLRCADFVVKEPMVI 77
           N++A L   N L+++   +P     +VL++M  VGICGSDVHY +  R ADF+VK+PMVI
Sbjct: 2   NLSAVLYKQNDLRLEQRPIPEPKEDEVLLQMAYVGICGSDVHYYEHGRIADFIVKDPMVI 61

Query: 78  GHECAGVIEKVGSEVKTLVPGDRVALEPGISCWRCDHCKGGRYNLCPEMKFFATPPVHGS 137
           GHE +G + KVG  VK L  GDRVA+EPG+ C RC  CK G+YNLCP++ F ATPP  G+
Sbjct: 62  GHEASGTVVKVGKNVKHLKKGDRVAVEPGVPCRRCQFCKEGKYNLCPDLTFCATPPDDGN 121

Query: 138 LANQVVHPADLCFKLPDNVSLEEGAMC-EPLSVGLHACRRANIGPETNVLIMGA 190
           LA   VH AD C KLPDN ++++       L   + A   A    +  + +M +
Sbjct: 122 LARYYVHAADFCHKLPDNCNVKQLVTHSFKLEQTVDAFEAARKKADNTIKVMIS 175

>d1p0fa1 b.35.1.2 (A:1001-1163,A:1338-1372) Alcohol dehydrogenase {Frog (Rana perezi) [TaxId: 8403]} Length = 198

class: All beta proteins
fold: GroES-like
superfamily: GroES-like
family: Alcohol dehydrogenase-like, N-terminal domain
domain: Alcohol dehydrogenase
species: Frog (Rana perezi) [TaxId: 8403]

 Score =  100 bits (249), Expect = 9e-26
 Identities = 37/179 (20%), Positives = 65/179 (36%), Gaps = 16/179 (8%)

Query: 29  LKIQPFELPSLGPYDVLVRMKAVGICGSDVHYLKTLRCADFVVKEPMVIGHECAGVIEKV 88
           L ++   +     ++V +++ A GICGSD              K P+++GHE  GV+E +
Sbjct: 21  LSLETITVAPPKAHEVRIKILASGICGSDSSV----LKEIIPSKFPVILGHEAVGVVESI 76

Query: 89  GSEVKTLVPGDRVALEPGISCWRCDHCKGGRYNLCPEMKFFATPPVHGSLANQVVHPADL 148
           G+ V  + PGD+V       C  C  CK    N C +    A   +   + ++       
Sbjct: 77  GAGVTCVKPGDKVIPLFVPQCGSCRACKSSNSNFCEKNDMGAKTGLMADMTSRFTCRGKP 136

Query: 149 CFKLPDNVSLEEGAMCEPLSVG------------LHACRRANIGPETNVLIMGAGPIGL 195
            + L    +  E  +   ++V                     I     +L  G G   +
Sbjct: 137 IYNLMGTSTFTEYTVVADIAVAKIDPKINVNFLVSTKLTLDQINKAFELLSSGQGVRSI 195

>d1piwa1 b.35.1.2 (A:1-152,A:321-360) Cinnamyl alcohol dehydrogenase, ADH6 {Baker's yeast (Saccharomyces cerevisiae) [TaxId: 4932]} Length = 192

class: All beta proteins
fold: GroES-like
superfamily: GroES-like
family: Alcohol dehydrogenase-like, N-terminal domain
domain: Cinnamyl alcohol dehydrogenase, ADH6
species: Baker's yeast (Saccharomyces cerevisiae) [TaxId: 4932]

 Score = 98.4 bits (244), Expect = 4e-25
 Identities = 37/174 (21%), Positives = 69/174 (39%), Gaps = 12/174 (6%)

Query: 27  NTLKIQPFELPSLGPYDVLVRMKAVGICGSDVHYLKTLRCADFVVKEPMVIGHECAGVIE 86
              K   ++      +D+ ++++A G+CGSD+H           +K P+V+GHE  G + 
Sbjct: 19  KNPKKTKYDPKPFYDHDIDIKIEACGVCGSDIHC---AAGHWGNMKMPLVVGHEIVGKVV 75

Query: 87  KVGSEVKTLV-PGDRVAL-EPGISCWRCDHCKGGRYNLCPEMKFFATPP------VHGSL 138
           K+G +  + +  G RV +     SC  CD CK      C +     + P        G  
Sbjct: 76  KLGPKSNSGLKVGQRVGVGAQVFSCLECDRCKNDNEPYCTKFVTTYSQPYEDGYVSQGGY 135

Query: 139 ANQVVHPADLCFKLPDNVSLEEGAMCEP-LSVGLHACRRANIGPETNVLIMGAG 191
           AN V         +P+N+ +E   + E  +        + ++     ++     
Sbjct: 136 ANYVRVHEHFVVPIPENIWVETLPVGEAGVHEAFERMEKGDVRYRFTLVGYDKE 189

>d1kola1 b.35.1.2 (A:2-160,A:356-397) Formaldehyde dehydrogenase {Pseudomonas putida [TaxId: 303]} Length = 201

class: All beta proteins
fold: GroES-like
superfamily: GroES-like
family: Alcohol dehydrogenase-like, N-terminal domain
domain: Formaldehyde dehydrogenase
species: Pseudomonas putida [TaxId: 303]

 Score = 97.3 bits (241), Expect = 1e-24
 Identities = 46/209 (22%), Positives = 82/209 (39%), Gaps = 28/209 (13%)

Query: 18  NMAAWLLGVNTLKIQPFELPSL-------GPYDVLVRMKAVGICGSDVHYLKTLRCADFV 70
           N     LG   +++Q  + P +         + V++++ +  ICGSD H ++        
Sbjct: 2   NRGVVYLGSGKVEVQKIDYPKMQDPRGKKIEHGVILKVVSTNICGSDQHMVR----GRTT 57

Query: 71  VKEPMVIGHECAGVIEKVGSEVKTLVPGDRVALEPGISCWRCDHCKGGRYNLCPEMK--- 127
            +  +V+GHE  G + + G +V+ L  GD V++   ++C RC  CK     +C  +    
Sbjct: 58  AQVGLVLGHEITGEVIEKGRDVENLQIGDLVSVPFNVACGRCRSCKEMHTGVCLTVNPAR 117

Query: 128 ------FFATPPVHGSLANQVVHPAD--LCFKLPDNVS-LEEGAMCEPLSVGLHACRRAN 178
                 +       G  A  V+ P       KLPD    +E+  + E + V + +   A 
Sbjct: 118 AGGAYGYVDMGDWTGGQAEYVLVPYADFNLLKLPDRDKAMEKINIAEVVGVQVISLDDAP 177

Query: 179 IGPETNVLIMGAGPIGLVTMLGAPRAFGA 207
            G         AG      +    + F A
Sbjct: 178 RGYG----EFDAGVPKKFVIDPH-KTFSA 201

>d1cdoa1 b.35.1.2 (A:1-164,A:340-374) Alcohol dehydrogenase {Cod (Gadus callarias) [TaxId: 8053]} Length = 199

class: All beta proteins
fold: GroES-like
superfamily: GroES-like
family: Alcohol dehydrogenase-like, N-terminal domain
domain: Alcohol dehydrogenase
species: Cod (Gadus callarias) [TaxId: 8053]

 Score = 91.1 bits (225), Expect = 3e-22
 Identities = 37/182 (20%), Positives = 65/182 (35%), Gaps = 25/182 (13%)

Query: 29  LKIQPFELPSLGPYDVLVRMKAVGICGSDVHYLKTLRCADFVVKEPMVIGHECAGVIEKV 88
           L I+  E+      ++ +++ A G+C +D+++L   +  D          HE AG++E V
Sbjct: 21  LVIEEIEVDVPHANEIRIKIIATGVCHTDLYHLFEGKHKDGFPVVLG---HEGAGIVESV 77

Query: 89  GSEVKTLVPGDRVALEPGISCWRCDHCKGGRYNLCPEMKFFATPPVH------------- 135
           G  V    PG++V       C  C  C+  + N C +     +P V              
Sbjct: 78  GPGVTEFQPGEKVIPLFISQCGECRFCQSPKTNQCVKGWANESPDVMSPKETRFTCKGRK 137

Query: 136 -------GSLANQVVHPADLCFKLPDNVSLEEGA-MCEPLSVGLHAC-RRANIGPETNVL 186
                   + +   V       K+  +V L+E      PL     A     +      VL
Sbjct: 138 VLQFLGTSTFSQYTVVNQIAVAKIDPSVKLDEFITHRMPLESVNDAIDLMKHGKCIRTVL 197

Query: 187 IM 188
            +
Sbjct: 198 SL 199

>d1vj0a1 b.35.1.2 (A:2-155,A:338-367) Hypothetical protein TM0436 {Thermotoga maritima [TaxId: 2336]} Length = 184

class: All beta proteins
fold: GroES-like
superfamily: GroES-like
family: Alcohol dehydrogenase-like, N-terminal domain
domain: Hypothetical protein TM0436
species: Thermotoga maritima [TaxId: 2336]

 Score = 89.9 bits (222), Expect = 5e-22
 Identities = 43/173 (24%), Positives = 69/173 (39%), Gaps = 22/173 (12%)

Query: 29  LKIQPFELPSLGPYDVLVRMKAVGICGSDVHYLKTLRCADFVVKEPMVIGHECAGVIEKV 88
           L  + FE+  +    +LV + + G+CGSDVH     R  D  V  P+++GHE AG + +V
Sbjct: 17  LVYKEFEISDIPRGSILVEILSAGVCGSDVHM---FRGEDPRVPLPIILGHEGAGRVVEV 73

Query: 89  GSEVKTLVPGD-----RVALEPGISCWRCDHCK-GGRYNLCPEMKFF-------ATPPVH 135
             E + L          +    GI+C  C  CK      LCP  K +         P + 
Sbjct: 74  NGEKRDLNGELLKPGDLIVWNRGITCGECYWCKVSKEPYLCPNRKVYGINRGCSEYPHLR 133

Query: 136 GSLANQ-VVHPADLCFKLPDNVSLEEGAMCEPLSVGLHACRRANIGPETNVLI 187
           G  ++  V+ P     K+ + ++        PL     A           V++
Sbjct: 134 GCYSSHIVLDPETDVLKVSEKITHR-----LPLKEANKALELMESREALKVIL 181

>d1llua1 b.35.1.2 (A:2-143,A:310-342) Alcohol dehydrogenase {Pseudomonas aeruginosa [TaxId: 287]} Length = 175

class: All beta proteins
fold: GroES-like
superfamily: GroES-like
family: Alcohol dehydrogenase-like, N-terminal domain
domain: Alcohol dehydrogenase
species: Pseudomonas aeruginosa [TaxId: 287]

 Score = 87.7 bits (216), Expect = 2e-21
 Identities = 46/162 (28%), Positives = 70/162 (43%), Gaps = 6/162 (3%)

Query: 29  LKIQPFELPSLGPYDVLVRMKAVGICGSDVHYLKTLRCADFVVKEPMVIGHECAGVIEKV 88
           L+I+  ++P  GP  VLV+++A G+C +D+H  +           P + GHE  G +  V
Sbjct: 18  LRIEEVKVPLPGPGQVLVKIEASGVCHTDLHAAE--GDWPVKPPLPFIPGHEGVGYVAAV 75

Query: 89  GSEVKTLVPGDRVALEPGISCW-RCDHCKGGRYNLCPEMKFFATPPVHGSLANQVVHPAD 147
           GS V  +  GDRV +    +    C+HC  G   LC   +      V+G  A  V+   +
Sbjct: 76  GSGVTRVKEGDRVGIPWLYTACGCCEHCLTGWETLCESQQNT-GYSVNGGYAEYVLADPN 134

Query: 148 LCFKLPDNVSLEEGA-MCEPLSVGLHACRRANIGPETNVLIM 188
               LP NV         + ++  L   R   I     VL M
Sbjct: 135 YVGILPKNVKATIHPGKLDDINQILDQMRAGQIEGRI-VLEM 175

>d1rjwa1 b.35.1.2 (A:1-137,A:306-339) Alcohol dehydrogenase {Bacillus stearothermophilus [TaxId: 1422]} Length = 171

class: All beta proteins
fold: GroES-like
superfamily: GroES-like
family: Alcohol dehydrogenase-like, N-terminal domain
domain: Alcohol dehydrogenase
species: Bacillus stearothermophilus [TaxId: 1422]

 Score = 87.3 bits (215), Expect = 3e-21
 Identities = 52/162 (32%), Positives = 74/162 (45%), Gaps = 6/162 (3%)

Query: 29  LKIQPFELPSLGPYDVLVRMKAVGICGSDVHYLKTLRCADFVVKEPMVIGHECAGVIEKV 88
           LKI+  E P++   +VLVR+KA G+C +D+H            K P++ GHE  G++E+V
Sbjct: 13  LKIKEVEKPTISYGEVLVRIKACGVCHTDLHAAH--GDWPVKPKLPLIPGHEGVGIVEEV 70

Query: 89  GSEVKTLVPGDRVALEPGISCWR-CDHCKGGRYNLCPEMKFFATPPVHGSLANQVVHPAD 147
           G  V  L  GDRV +    S    CD+C  G+  LC   K      V G  A      AD
Sbjct: 71  GPGVTHLKVGDRVGIPWLYSACGHCDYCLSGQETLCEHQKNA-GYSVDGGYAEYCRAAAD 129

Query: 148 LCFKLPDNVSLEEGAMCEPLSVGLHACRRANIGPETNVLIMG 189
              K+PDN  +E     E ++       +  I     VL + 
Sbjct: 130 YVVKIPDNTIIEV-QPLEKINEVFDRMLKGQINGRV-VLTLE 169

>d2fzwa1 b.35.1.2 (A:1-162,A:339-373) Alcohol dehydrogenase {Human (Homo sapiens), different isozymes [TaxId: 9606]} Length = 197

class: All beta proteins
fold: GroES-like
superfamily: GroES-like
family: Alcohol dehydrogenase-like, N-terminal domain
domain: Alcohol dehydrogenase
species: Human (Homo sapiens), different isozymes [TaxId: 9606]

 Score = 87.6 bits (216), Expect = 5e-21
 Identities = 34/169 (20%), Positives = 63/169 (37%), Gaps = 26/169 (15%)

Query: 29  LKIQPFELPSLGPYDVLVRMKAVGICGSDVHYLKTLRCADFVVKEPMVIGHECAGVIEKV 88
           L I+  E+     ++V +++ A  +C +D +   TL  AD     P+++GH  AG++E V
Sbjct: 19  LSIEEIEVAPPKAHEVRIKIIATAVCHTDAY---TLSGADPEGCFPVILGHLGAGIVESV 75

Query: 89  GSEVKTLVPGDRVALEPGISCWRCDHCKGGRYNLCPEMKFFATPPVH------------- 135
           G  V  L  GD V       C  C  C   + NLC +++      +              
Sbjct: 76  GEGVTKLKAGDTVIPLYIPQCGECKFCLNPKTNLCQKIRVTQGKGLMPDGTSRFTCKGKT 135

Query: 136 -------GSLANQVVHPADLCFKLPDNVSLEEGAMCEPLSVGLHACRRA 177
                   + +   V       K+   + ++E       ++      +A
Sbjct: 136 ILHYMGTSTFSEYTVVADISVAKIDPLIKVDEFV---THNLSFDEINKA 181

>d1e3ia1 b.35.1.2 (A:1-167,A:342-376) Alcohol dehydrogenase {Mouse (Mus musculus), class II [TaxId: 10090]} Length = 202

class: All beta proteins
fold: GroES-like
superfamily: GroES-like
family: Alcohol dehydrogenase-like, N-terminal domain
domain: Alcohol dehydrogenase
species: Mouse (Mus musculus), class II [TaxId: 10090]

 Score = 87.6 bits (216), Expect = 5e-21
 Identities = 37/173 (21%), Positives = 63/173 (36%), Gaps = 31/173 (17%)

Query: 29  LKIQPFELPSLGPYDVLVRMKAVGICGSDVHYLKTLRCADFVVKEPMVIGHECAGVIEKV 88
           L I+  E+      +V +++ A  +C +D++              P+V+GHECAG++E V
Sbjct: 21  LCIEEIEVSPPKACEVRIQVIATCVCPTDINA----TDPKKKALFPVVLGHECAGIVESV 76

Query: 89  GSEVKTLVPGDRVALEPGISCWRCDHCKGGRYNLCPEMKFFATPPV-------------- 134
           G  V    PGD+V       C RC  C     NLC +++ F  P +              
Sbjct: 77  GPGVTNFKPGDKVIPFFAPQCKRCKLCLSPLTNLCGKLRNFKYPTIDQELMEDRTSRFTC 136

Query: 135 ----------HGSLANQVVHPADLCFKLPDNVSLEEGAMCEPLSVGLHACRRA 177
                       S +   V       ++ D   L+        ++   +   A
Sbjct: 137 KGRSIYHFMGVSSFSQYTVVSEANLARVDDEFDLDLLV---THALPFESINDA 186

>d1jvba1 b.35.1.2 (A:1-143,A:314-347) Alcohol dehydrogenase {Archaeon Sulfolobus solfataricus [TaxId: 2287]} Length = 177

class: All beta proteins
fold: GroES-like
superfamily: GroES-like
family: Alcohol dehydrogenase-like, N-terminal domain
domain: Alcohol dehydrogenase
species: Archaeon Sulfolobus solfataricus [TaxId: 2287]

 Score = 86.5 bits (213), Expect = 8e-21
 Identities = 48/166 (28%), Positives = 71/166 (42%), Gaps = 9/166 (5%)

Query: 29  LKIQPFELPSLGPYDVLVRMKAVGICGSDVH-----YLKTLRCADFVVKEPMVIGHECAG 83
           L +Q   +P      VL++++A G+C SDVH     +       D  VK P+ +GHE AG
Sbjct: 13  LSLQEIGVPKPKGPQVLIKVEAAGVCHSDVHMRQGRFGNLRIVEDLGVKLPVTLGHEIAG 72

Query: 84  VIEKVGSEVKTLVPGDRVALEPGISCWRCDHCKGGRYNLCPEMKFFATPPVHGSLANQVV 143
            IE+VG EV     GD VA+ P      C +C+ G  +LC   ++       G+ A  V+
Sbjct: 73  KIEEVGDEVVGYSKGDLVAVNPWQGEGNCYYCRIGEEHLCDSPRWLGI-NFDGAYAEYVI 131

Query: 144 HPA-DLCFKLPDNVSLEEGAM-CEPLSVGLHACRRANIGPETNVLI 187
            P     +KL     +    M  E  +  +             VLI
Sbjct: 132 VPHYKYMYKLRRVKPMITKTMKLEEANEAIDNLENFKAIGRQ-VLI 176

>d1jqba1 b.35.1.2 (A:1001-1139,A:1314-1351) Bacterial secondary alcohol dehydrogenase {Clostridium beijerinckii [TaxId: 1520]} Length = 177

class: All beta proteins
fold: GroES-like
superfamily: GroES-like
family: Alcohol dehydrogenase-like, N-terminal domain
domain: Bacterial secondary alcohol dehydrogenase
species: Clostridium beijerinckii [TaxId: 1520]

 Score = 84.6 bits (208), Expect = 3e-20
 Identities = 48/182 (26%), Positives = 68/182 (37%), Gaps = 16/182 (8%)

Query: 20  AAWLLGVNTLKIQPFELPSLGPYDVLVRMKAVGICGSDVHYLKTLRCADFVVKEPMVIGH 79
              +LG+N L     E P  G YD +VR  AV  C SD+H    +       ++ M++GH
Sbjct: 3   GFAMLGINKLGWIEKERPVAGSYDAIVRPLAVSPCTSDIHT---VFEGALGDRKNMILGH 59

Query: 80  ECAGVIEKVGSEVKTLVPGDRVALEPGISCWRCDHCKGGRYNLCPEMKFF--ATPPVHGS 137
           E  G + +VGSEVK   PGDRV +      WR    + G       M      +    G 
Sbjct: 60  EAVGEVVEVGSEVKDFKPGDRVIVPCTTPDWRSLEVQAGFQQHSNGMLAGWKFSNFKDGV 119

Query: 138 LANQVVHPA--DLCFKLPDNVSLEEGAMCEPLSVGLHACRRANIGPETNVLIMGAGPIGL 195
                           LP +V L +      +  G      A       +L+M   P  L
Sbjct: 120 FGEYFHVNDADMNLAILPKDVDLSKLVTH--VYHGFDHIEEA-------LLLMKDKPKDL 170

Query: 196 VT 197
           + 
Sbjct: 171 IK 172

>d1uufa1 b.35.1.2 (A:3-144,A:313-349) Hypothetical protein YahK {Escherichia coli [TaxId: 562]} Length = 179

class: All beta proteins
fold: GroES-like
superfamily: GroES-like
family: Alcohol dehydrogenase-like, N-terminal domain
domain: Hypothetical protein YahK
species: Escherichia coli [TaxId: 562]

 Score = 84.6 bits (208), Expect = 4e-20
 Identities = 36/160 (22%), Positives = 59/160 (36%), Gaps = 13/160 (8%)

Query: 29  LKIQPFELPSLGPYDVLVRMKAVGICGSDVHYLKTLRCADFVVKEPMVIGHECAGVIEKV 88
           L+         GP DV + +   G+C SD+H    +R        P V GHE  G +  V
Sbjct: 13  LEPMDITRREPGPNDVKIEIAYCGVCHSDLHQ---VRSEWAGTVYPCVPGHEIVGRVVAV 69

Query: 89  GSEVKTLVPGDRVALEPGISCWR-CDHCKGGRYNLCPEMKFFATPP-------VHGSLAN 140
           G +V+   PGD V +   +   + C+ C+ G  N C  M      P         G  + 
Sbjct: 70  GDQVEKYAPGDLVGVGCIVDSCKHCEECEDGLENYCDHMTGTYNSPTPDEPGHTLGGYSQ 129

Query: 141 QVVHPADLCFKLPDNVSLEEGAMCEPLSVGLHACRRANIG 180
           Q+V       ++       E    + ++       R ++ 
Sbjct: 130 QIVVHERYVLRIRVA--DIEMIRADQINEAYERMLRGDVK 167

>d1h2ba1 b.35.1.2 (A:17-154,A:327-359) Alcohol dehydrogenase {Archaeon Aeropyrum pernix [TaxId: 56636]} Length = 171

class: All beta proteins
fold: GroES-like
superfamily: GroES-like
family: Alcohol dehydrogenase-like, N-terminal domain
domain: Alcohol dehydrogenase
species: Archaeon Aeropyrum pernix [TaxId: 56636]

 Score = 82.4 bits (202), Expect = 2e-19
 Identities = 45/161 (27%), Positives = 73/161 (45%), Gaps = 4/161 (2%)

Query: 29  LKIQPFELPSL-GPYDVLVRMKAVGICGSDVHYLKTLRCADFVVKEPMVIGHECAGVIEK 87
           L+I+  + P L G +DV+VR+   G+C +D+H ++ +       K P  +GHE  G IE+
Sbjct: 12  LRIEDVDYPRLEGRFDVIVRIAGAGVCHTDLHLVQGMWHELLQPKLPYTLGHENVGYIEE 71

Query: 88  VGSEVKTLVPGDRVALEPGISCWRCDHCKGGRYNLCPEMKFFATPPVHGSLANQVVHPAD 147
           V   V+ L  GD V L P ++   C  C+ G    C  ++F       G  A  +     
Sbjct: 72  VAEGVEGLEKGDPVILHPAVTDGTCLACRAGEDMHCENLEFPGLNIDGGF-AEFMRTSHR 130

Query: 148 LCFKLPDNVSLEEGA-MCEPLSVGLHACRRANIGPETNVLI 187
              KLP +V +E      + ++  L    +  +     VLI
Sbjct: 131 SVIKLPKDVRVEVDIHKLDEINDVLERLEKGEVLGRA-VLI 170

>d2jhfa1 b.35.1.2 (A:1-163,A:340-374) Alcohol dehydrogenase {Horse (Equus caballus) [TaxId: 9796]} Length = 198

class: All beta proteins
fold: GroES-like
superfamily: GroES-like
family: Alcohol dehydrogenase-like, N-terminal domain
domain: Alcohol dehydrogenase
species: Horse (Equus caballus) [TaxId: 9796]

 Score = 77.2 bits (189), Expect = 3e-17
 Identities = 40/182 (21%), Positives = 64/182 (35%), Gaps = 32/182 (17%)

Query: 29  LKIQPFELPSLGPYDVLVRMKAVGICGSDVHYLKTLRCADFVVKEPMVIGHECAGVIEKV 88
             I+  E+     ++V ++M A GIC SD H          V   P++ GHE AG++E +
Sbjct: 21  FSIEEVEVAPPKAHEVRIKMVATGICRSDDHV----VSGTLVTPLPVIAGHEAAGIVESI 76

Query: 89  GSEVKTLVPGDRVALEPGISCWRCDHCKGGRYNLCPEMKFFATPPVH------------- 135
           G  V T+ PGD+V       C +C  CK    N C +                       
Sbjct: 77  GEGVTTVRPGDKVIPLFTPQCGKCRVCKHPEGNFCLKNDLSMPRGTMQDGTSRFTCRGKP 136

Query: 136 -------GSLANQVVHPADLCFKLPDNVSLEEGAMCEPLSVGLHACRRANIGPETNVLIM 188
                   + +   V       K+    +L      +PL   +    +  I    ++L  
Sbjct: 137 IHHFLGTSTFSQYTVVDEISVAKIDAAFAL------DPLITHVLPFEK--INEGFDLLRS 188

Query: 189 GA 190
           G 
Sbjct: 189 GE 190

>d1f8fa1 b.35.1.2 (A:4-162,A:337-371) Benzyl alcohol dehydrogenase {Acinetobacter calcoaceticus [TaxId: 471]} Length = 194

class: All beta proteins
fold: GroES-like
superfamily: GroES-like
family: Alcohol dehydrogenase-like, N-terminal domain
domain: Benzyl alcohol dehydrogenase
species: Acinetobacter calcoaceticus [TaxId: 471]

 Score = 75.4 bits (184), Expect = 1e-16
 Identities = 35/198 (17%), Positives = 66/198 (33%), Gaps = 12/198 (6%)

Query: 19  MAAWLLGVNT-LKIQPFELPSLGPYDVLVRMKAVGICGSDVHYLKTLRCADFVVKEPMVI 77
           +AA         ++Q  ++      +VLV++ A G+C +D+               P V+
Sbjct: 5   IAAVTPCKGADFELQALKIRQPQGDEVLVKVVATGMCHTDLIVRDQKYPVPL----PAVL 60

Query: 78  GHECAGVIEKVGSEVKTLVPGDRVALEPGISCWRCDHCKGGRYNLCPEMKFFATPPVHGS 137
           GHE +G+IE +G  V  L  GD V L     C +C  C  G    C E          G+
Sbjct: 61  GHEGSGIIEAIGPNVTELQVGDHVVLSY-GYCGKCTQCNTGNPAYCSEF---FGRNFSGA 116

Query: 138 LANQVVHPADLCFKLPDNVSLEEGAMCEPLSVGLHACRR--ANIGPETNVLIMGAGPIGL 195
            +            + ++    + +         +   +   +   +  V       I  
Sbjct: 117 DSEGNHALCTHDQGVVNDHFFAQSSFATYALSRENNTVKVTKDFPFDQLVKFYAFDEINQ 176

Query: 196 VTMLGAPRAFGAPRIVIV 213
             +    +      I+ +
Sbjct: 177 AAIDSR-KGITLKPIIKI 193

>d1kola2 c.2.1.1 (A:161-355) Formaldehyde dehydrogenase {Pseudomonas putida [TaxId: 303]} Length = 195

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Alcohol dehydrogenase-like, C-terminal domain
domain: Formaldehyde dehydrogenase
species: Pseudomonas putida [TaxId: 303]

 Score = 64.5 bits (156), Expect = 8e-13
 Identities = 33/156 (21%), Positives = 57/156 (36%), Gaps = 20/156 (12%)

Query: 162 AMCEPLSVGLHACRRANIGPETNVLIMGAGPIGLVTMLGAPRAFGAPRIVIVDVDDYRLS 221
            + + L  G H    A +GP + V + GAGP+GL     A     A  IV    +  RL+
Sbjct: 6   CLSDILPTGYHGAVTAGVGPGSTVYVAGAGPVGLAAAASARLLGAAVVIVGDL-NPARLA 64

Query: 222 VAKEIGADNIVKVSTNLQDIAEEVEKIQKAMGTGIDVSFDCAGL---------------N 266
            AK  G +      +    + E++  +       +D + D  G                 
Sbjct: 65  HAKAQGFEIA--DLSLDTPLHEQIAALL--GEPEVDCAVDAVGFEARGHGHEGAKHEAPA 120

Query: 267 KTMSTALGATCAGGKVCLVGMGHHEMTVPLTPAAVR 302
             +++ +  T   GK+ + G+   E    +  AA  
Sbjct: 121 TVLNSLMQVTRVAGKIGIPGLYVTEDPGAVDAAAKI 156

>d1jqba2 c.2.1.1 (A:1140-1313) Bacterial secondary alcohol dehydrogenase {Clostridium beijerinckii [TaxId: 1520]} Length = 174

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Alcohol dehydrogenase-like, C-terminal domain
domain: Bacterial secondary alcohol dehydrogenase
species: Clostridium beijerinckii [TaxId: 1520]

 Score = 61.9 bits (149), Expect = 4e-12
 Identities = 26/146 (17%), Positives = 57/146 (39%), Gaps = 6/146 (4%)

Query: 156 VSLEEGAM-CEPLSVGLHACRRANIGPETNVLIMGAGPIGLVTMLGAPRAFGAPRIVIVD 214
           + LE   M  + ++ G H    A+I   ++V+++G G +GL+ + GA        I +  
Sbjct: 1   MPLENAVMITDMMTTGFHGAELADIEMGSSVVVIGIGAVGLMGIAGAKLRGAGRIIGVGS 60

Query: 215 VDDYRLSVAKEIGADNIVKVSTNLQDIAEEVEKIQKAMGTGIDVSFDCAGLNKTMSTALG 274
                 +       D +   + +++D       ++   G G+D      G ++T+S A+ 
Sbjct: 61  RPICVEAAKFYGATDILNYKNGHIEDQV-----MKLTNGKGVDRVIMAGGGSETLSQAVK 115

Query: 275 ATCAGGKVCLVGMGHHEMTVPLTPAA 300
               GG +  +        + +    
Sbjct: 116 MVKPGGIISNINYHGSGDALLIPRVE 141

>d1f8fa2 c.2.1.1 (A:163-336) Benzyl alcohol dehydrogenase {Acinetobacter calcoaceticus [TaxId: 471]} Length = 174

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Alcohol dehydrogenase-like, C-terminal domain
domain: Benzyl alcohol dehydrogenase
species: Acinetobacter calcoaceticus [TaxId: 471]

 Score = 61.8 bits (149), Expect = 4e-12
 Identities = 36/174 (20%), Positives = 70/174 (40%), Gaps = 17/174 (9%)

Query: 165 EPLSVGLH-----ACRRANIGPETNVLIMGAGPIGLVTMLGAPRAFGAPRIVIVDVDDYR 219
            PL  G+            + P ++ +  GAG +GL  +L A     +  I +  V+  R
Sbjct: 7   GPLGCGIQTGAGACINALKVTPASSFVTWGAGAVGLSALLAAKVCGASIIIAVDIVES-R 65

Query: 220 LSVAKEIGADNIVKVSTNLQDIAEEVEKIQKAMGTGIDVSFDCAGLNKTMSTALGATCAG 279
           L +AK++GA +++   T      + V  I++    G++ + +  G  + +   + A    
Sbjct: 66  LELAKQLGATHVINSKTQ-----DPVAAIKEITDGGVNFALESTGSPEILKQGVDALGIL 120

Query: 280 GKVCLVGMGH--HEMTVPLTPAAVREVDVVGVF----RYKNTWPLCLELLRSGK 327
           GK+ +VG           +    +    ++GV       K   P  + L + GK
Sbjct: 121 GKIAVVGAPQLGTTAQFDVNDLLLGGKTILGVVEGSGSPKKFIPELVRLYQQGK 174

>d1vj0a2 c.2.1.1 (A:156-337) Hypothetical protein TM0436 {Thermotoga maritima [TaxId: 2336]} Length = 182

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Alcohol dehydrogenase-like, C-terminal domain
domain: Hypothetical protein TM0436
species: Thermotoga maritima [TaxId: 2336]

 Score = 56.5 bits (135), Expect = 3e-10
 Identities = 26/184 (14%), Positives = 51/184 (27%), Gaps = 6/184 (3%)

Query: 154 DNVSLEEGAMCEPLSVGLHACRRANIGPETNVLIMGAGPIGLVTMLGAPRAFGAPRIVIV 213
           D++ +   AMC   +                V+I GAGP+G                VIV
Sbjct: 1   DDLDVLAMAMCSGATAYHAFDEYPESFAGKTVVIQGAGPLG--LFGVVIARSLGAENVIV 58

Query: 214 DVDDYRLSVAKEIGADNIVKVSTNLQDIAEEVEKIQKAMGTGIDVSFDCAGLNKTMSTAL 273
                      E    ++                +    G G D   +  G ++ +    
Sbjct: 59  IAGSPNRLKLAEEIGADLTLNRRETSVEERRKAIMDITHGRGADFILEATGDSRALLEGS 118

Query: 274 GATCAGGKVCLVGMGHHEMTVPLTPAA---VREVDVVGVFRY-KNTWPLCLELLRSGKID 329
                GG   + G+   +  VP        ++     G++    + +   + +       
Sbjct: 119 ELLRRGGFYSVAGVAVPQDPVPFKVYEWLVLKNATFKGIWVSDTSHFVKTVSITSRNYQL 178

Query: 330 VKPL 333
           +  L
Sbjct: 179 LSKL 182

>d1tt7a1 b.35.1.2 (A:2-127,A:295-330) Hypothetical protein YhfP {Bacillus subtilis [TaxId: 1423]} Length = 162

class: All beta proteins
fold: GroES-like
superfamily: GroES-like
family: Alcohol dehydrogenase-like, N-terminal domain
domain: Hypothetical protein YhfP
species: Bacillus subtilis [TaxId: 1423]

 Score = 55.3 bits (132), Expect = 6e-10
 Identities = 23/172 (13%), Positives = 44/172 (25%), Gaps = 27/172 (15%)

Query: 25  GVNTLKIQPFELPSLGPYDVLVRMKAVGICGSDVHYLKTLRCADFVVKEPMVIGHECAGV 84
              ++ ++      L    VL+++   GI   D    K            + I       
Sbjct: 14  DDVSVHVKTISTEDLPKDGVLIKVAYSGINYKDGLAGKAGGNIVREYPLILGIDAAG--- 70

Query: 85  IEKVGSEVKTLVPGDRVALEPGISCWRCDHCKGGRYNLCPEMKFFATPPVHGSLANQVVH 144
                                  +    +  +    +      +       G L+     
Sbjct: 71  -----------------------TVVSSNDPRFAEGDEVIATSYELGVSRDGGLSEYASV 107

Query: 145 PADLCFKLPDNVSLEEGAMCEPLSVGLHACRRANIGPETNVLIMGAGPIGLV 196
           P D    LP N+SL+E  + + L++           P     I+     G V
Sbjct: 108 PGDWLVPLPQNLSLKEAMVDQLLTIVDREVSL-EETPGALKDILQNRIQGRV 158

>d1cdoa2 c.2.1.1 (A:165-339) Alcohol dehydrogenase {Cod (Gadus callarias) [TaxId: 8053]} Length = 175

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Alcohol dehydrogenase-like, C-terminal domain
domain: Alcohol dehydrogenase
species: Cod (Gadus callarias) [TaxId: 8053]

 Score = 54.3 bits (129), Expect = 2e-09
 Identities = 35/158 (22%), Positives = 57/158 (36%), Gaps = 9/158 (5%)

Query: 175 RRANIGPETNVLIMGAGPIGLVTMLGAPRAFGAPRIVIVDVDDYRLSVAKEIGADNIVKV 234
             A + P +   + G G +GL  ++G   A     I +    D +   AK  GA + V  
Sbjct: 22  NTAKVEPGSTCAVFGLGAVGLAAVMGCHSAGAKRIIAVDLNPD-KFEKAKVFGATDFVNP 80

Query: 235 STNLQDIAEEVEKIQKAMGTGIDVSFDCAGLNKTMSTALGATCAGGKVC-LVGMGHHEMT 293
           + + + I    + + K    G+D S +C G    M  AL +   G  V  LVG       
Sbjct: 81  NDHSEPI---SQVLSKMTNGGVDFSLECVGNVGVMRNALESCLKGWGVSVLVGWTDLHDV 137

Query: 294 VPLTPAAVREVDVVGV----FRYKNTWPLCLELLRSGK 327
                  +      G     F+ K+  P  ++     K
Sbjct: 138 ATRPIQLIAGRTWKGSMFGGFKGKDGVPKMVKAYLDKK 175

>d2jhfa2 c.2.1.1 (A:164-339) Alcohol dehydrogenase {Horse (Equus caballus) [TaxId: 9796]} Length = 176

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Alcohol dehydrogenase-like, C-terminal domain
domain: Alcohol dehydrogenase
species: Horse (Equus caballus) [TaxId: 9796]

 Score = 54.2 bits (129), Expect = 2e-09
 Identities = 39/160 (24%), Positives = 69/160 (43%), Gaps = 12/160 (7%)

Query: 175 RRANIGPETNVLIMGAGPIGLVTMLGAPRAFGAPRIVIVDVDDYRLSVAKEIGADNIVKV 234
           + A +   +   + G G +GL  ++G  +A GA RI+ VD++  + + AKE+GA   V  
Sbjct: 22  KVAKVTQGSTCAVFGLGGVGLSVIMGC-KAAGAARIIGVDINKDKFAKAKEVGATECV-- 78

Query: 235 STNLQDIAEEVEKIQKAMGT-GIDVSFDCAGLNKTMSTALGATCAGGKVCLVGMGHHEMT 293
             N QD  + ++++   M   G+D SF+  G   TM TAL        V ++     +  
Sbjct: 79  --NPQDYKKPIQEVLTEMSNGGVDFSFEVIGRLDTMVTALSCCQEAYGVSVIVGVPPDSQ 136

Query: 294 VPLTPAA--VREVDVVGV----FRYKNTWPLCLELLRSGK 327
                    +      G     F+ K++ P  +    + K
Sbjct: 137 NLSMNPMLLLSGRTWKGAIFGGFKSKDSVPKLVADFMAKK 176

>d1xa0a1 b.35.1.2 (A:1-118,A:295-328) B. subtilis YhfP homologue {Bacillus stearothermophilus [TaxId: 1422]} Length = 152

class: All beta proteins
fold: GroES-like
superfamily: GroES-like
family: Alcohol dehydrogenase-like, N-terminal domain
domain: B. subtilis YhfP homologue
species: Bacillus stearothermophilus [TaxId: 1422]

 Score = 53.0 bits (126), Expect = 4e-09
 Identities = 24/177 (13%), Positives = 39/177 (22%), Gaps = 32/177 (18%)

Query: 18  NMAAWLL----GVNTLKIQPFELPSLGPYDVLVRMKAVGICGSDVHYLKTLRCADFVVKE 73
              A+++       T  +Q   +  L   DVLVR+    +   D                
Sbjct: 3   AFQAFVVNKTETEFTAGVQTISMDDLPEGDVLVRVHYSSVNYKDGLASIPDGKIVKTYPF 62

Query: 74  PMVIGHECAGVIEKVGSEVKTLVPGDRVALEPGISCWRCDHCKGGRYNLCPEMKFFATPP 133
              I          V S+      GD V                                
Sbjct: 63  VPGIDLAG----VVVSSQHPRFREGDEVIATGYEIGV----------------------T 96

Query: 134 VHGSLANQVVHPADLCFKLPDNVSLEEGAM-CEPLSVGLHACRRANIGPETNVLIMG 189
             G  +       +    LP  +      +    L   L    R  +   T V+ + 
Sbjct: 97  HFGGYSEYARLHGEWLVPLPKGLERIAQEISLAELPQALKRILRGELRGRT-VVRLA 152

>d1h2ba2 c.2.1.1 (A:155-326) Alcohol dehydrogenase {Archaeon Aeropyrum pernix [TaxId: 56636]} Length = 172

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Alcohol dehydrogenase-like, C-terminal domain
domain: Alcohol dehydrogenase
species: Archaeon Aeropyrum pernix [TaxId: 56636]

 Score = 53.0 bits (126), Expect = 5e-09
 Identities = 31/179 (17%), Positives = 60/179 (33%), Gaps = 14/179 (7%)

Query: 156 VSLEEGAMCEPLSV----GLHACRRA--NIGPETNVLIMGAGPIGLVTMLGAPRAFGAPR 209
           +S E+     PL+        A ++A   + P   V I+G G +G + +        A  
Sbjct: 1   ISREKLVEMAPLADAGITAYRAVKKAARTLYPGAYVAIVGVGGLGHIAVQLLKVMTPATV 60

Query: 210 IVIVDVDDYRLSVAKEIGADNIVKVSTNLQDIAEEVEKIQKAMGTGIDVSFDCAGLNKTM 269
           I +   ++      +      +      ++ +      ++   G G++V+ D  G   T+
Sbjct: 61  IALDVKEEKLKLAERLGADHVVDARRDPVKQV------MELTRGRGVNVAMDFVGSQATV 114

Query: 270 STALGATCAGGKVCLVGMGHHEMTVPLTPAAVREVDVVGVFRY-KNTWPLCLELLRSGK 327
                     G++ +VG    E+  P       EV   G            + L   GK
Sbjct: 115 DYTPYLLGRMGRLIIVGY-GGELRFPTIRVISSEVSFEGSLVGNYVELHELVTLALQGK 172

>d1p0fa2 c.2.1.1 (A:1164-1337) Alcohol dehydrogenase {Frog (Rana perezi) [TaxId: 8403]} Length = 174

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Alcohol dehydrogenase-like, C-terminal domain
domain: Alcohol dehydrogenase
species: Frog (Rana perezi) [TaxId: 8403]

 Score = 52.9 bits (126), Expect = 5e-09
 Identities = 36/161 (22%), Positives = 65/161 (40%), Gaps = 11/161 (6%)

Query: 173 ACRRANIGPETNVLIMGAGPIGLVTMLGAPRAFGAPRIVIVDVDDYRLSVAKEIGADNIV 232
           A   A + P +   + G G +G   ++G  +A GA RI+ V     +   A E+GA   +
Sbjct: 19  AVNTAKVTPGSTCAVFGLGGVGFSAIVGC-KAAGASRIIGVGTHKDKFPKAIELGATECL 77

Query: 233 KVSTNLQDIAEEVEKIQKAMGT-GIDVSFDCAGLNKTMSTALGATCA-GGKVCLVGMGHH 290
               N +D  + + ++       G+D + +CAG  +TM  AL +T    G   ++G+   
Sbjct: 78  ----NPKDYDKPIYEVICEKTNGGVDYAVECAGRIETMMNALQSTYCGSGVTVVLGLASP 133

Query: 291 EMTVPLTPAA-VREVDVVGVF---RYKNTWPLCLELLRSGK 327
              +PL P   +    + G              ++     K
Sbjct: 134 NERLPLDPLLLLTGRSLKGSVFGGFKGEEVSRLVDDYMKKK 174

>d1e3ia2 c.2.1.1 (A:168-341) Alcohol dehydrogenase {Mouse (Mus musculus), class II [TaxId: 10090]} Length = 174

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Alcohol dehydrogenase-like, C-terminal domain
domain: Alcohol dehydrogenase
species: Mouse (Mus musculus), class II [TaxId: 10090]

 Score = 52.2 bits (124), Expect = 9e-09
 Identities = 35/159 (22%), Positives = 68/159 (42%), Gaps = 8/159 (5%)

Query: 173 ACRRANIGPETNVLIMGAGPIGLVTMLGAPRAFGAPRIVIVDVDDYRLSVAKEIGADNIV 232
           A   A + P +   + G G +GL  ++G     GA RI+ +D++  +   AK +GA + +
Sbjct: 20  AINTAKVTPGSTCAVFGLGCVGLSAIIGCK-IAGASRIIAIDINGEKFPKAKALGATDCL 78

Query: 233 KVSTNLQDIAEEVEKIQKAMGTGIDVSFDCAGLNKTMSTALGATCAGGKVCLVGMGHHEM 292
                 + + + + ++      G+D S DCAG  +T+  A+  T  G   C V     + 
Sbjct: 79  NPRELDKPVQDVITELTAG---GVDYSLDCAGTAQTLKAAVDCTVLGWGSCTVVGAKVDE 135

Query: 293 TVPLTPAAVREVDVVGVF----RYKNTWPLCLELLRSGK 327
               T   +    + G F    +  ++ P  +   ++ K
Sbjct: 136 MTIPTVDVILGRSINGTFFGGWKSVDSVPNLVSDYKNKK 174

>d2fzwa2 c.2.1.1 (A:163-338) Alcohol dehydrogenase {Human (Homo sapiens), different isozymes [TaxId: 9606]} Length = 176

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Alcohol dehydrogenase-like, C-terminal domain
domain: Alcohol dehydrogenase
species: Human (Homo sapiens), different isozymes [TaxId: 9606]

 Score = 51.9 bits (123), Expect = 1e-08
 Identities = 41/159 (25%), Positives = 65/159 (40%), Gaps = 10/159 (6%)

Query: 175 RRANIGPETNVLIMGAGPIGLVTMLGAPRAFGAPRIVIVDVDDYRLSVAKEIGADNIVKV 234
             A + P +   + G G +GL  ++G  +  GA RI+ VD++  + + AKE GA   +  
Sbjct: 22  NTAKLEPGSVCAVFGLGGVGLAVIMGC-KVAGASRIIGVDINKDKFARAKEFGATECINP 80

Query: 235 STNLQDIAEEVEKIQKAMGTGIDVSFDCAGLNKTMSTALGATCAG-GKVCLVGMGHHEMT 293
               + I    E + +    G+D SF+C G  K M  AL A   G G   +VG+      
Sbjct: 81  QDFSKPI---QEVLIEMTDGGVDYSFECIGNVKVMRAALEACHKGWGVSVVVGVAASGEE 137

Query: 294 VPLTPAA-VREVDVVGVF----RYKNTWPLCLELLRSGK 327
           +   P   V      G      +   + P  +    S K
Sbjct: 138 IATRPFQLVTGRTWKGTAFGGWKSVESVPKLVSEYMSKK 176

>d1d1ta2 c.2.1.1 (A:163-338) Alcohol dehydrogenase {Human (Homo sapiens), different isozymes [TaxId: 9606]} Length = 176

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Alcohol dehydrogenase-like, C-terminal domain
domain: Alcohol dehydrogenase
species: Human (Homo sapiens), different isozymes [TaxId: 9606]

 Score = 51.4 bits (122), Expect = 2e-08
 Identities = 29/148 (19%), Positives = 60/148 (40%), Gaps = 9/148 (6%)

Query: 167 LSVGLHAC-RRANIGPETNVLIMGAGPIGLVTMLGAPRAFGAPRIVIVDVDDYRLSVAKE 225
            S G  A  +   + P +  ++ G G +GL  ++G  ++ GA RI+ +D++  +   A  
Sbjct: 14  FSTGYGAAVKTGKVKPGSTCVVFGLGGVGLSVIMGC-KSAGASRIIGIDLNKDKFEKAMA 72

Query: 226 IGADNIVKVSTNLQDIAEEVEKIQKAMG-TGIDVSFDCAGLNKTMSTALGATCAGGKVC- 283
           +GA   +    + +D  + + ++   M    +  +F+  G  +TM  AL +         
Sbjct: 73  VGATECI----SPKDSTKPISEVLSEMTGNNVGYTFEVIGHLETMIDALASCHMNYGTSV 128

Query: 284 LVGMGHHEMTVPLTP-AAVREVDVVGVF 310
           +VG+      +   P          G  
Sbjct: 129 VVGVPPSAKMLTYDPMLLFTGRTWKGCV 156

>d1rjwa2 c.2.1.1 (A:138-305) Alcohol dehydrogenase {Bacillus stearothermophilus [TaxId: 1422]} Length = 168

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Alcohol dehydrogenase-like, C-terminal domain
domain: Alcohol dehydrogenase
species: Bacillus stearothermophilus [TaxId: 1422]

 Score = 48.6 bits (114), Expect = 2e-07
 Identities = 43/175 (24%), Positives = 68/175 (38%), Gaps = 12/175 (6%)

Query: 157 SLEEGA--MCEPLSVGLHACRRANIGPETNVLIMGAGPIGLVTMLGAPRAFGAPRIVIVD 214
           S EE A   C  ++    A +     P   V I G G +G V +  A        +V VD
Sbjct: 2   SFEEAAPIFCAGVTT-YKALKVTGAKPGEWVAIYGIGGLGHVAVQYAK--AMGLNVVAVD 58

Query: 215 VDDYRLSVAKEIGADNIVKVSTNLQDIAEEVEKIQKAMGTGIDVSFDCAGLNKTMSTALG 274
           + D +L +AKE+GAD +V              K  K    G+  +   A       +A  
Sbjct: 59  IGDEKLELAKELGADLVVNPLKEDAA------KFMKEKVGGVHAAVVTAVSKPAFQSAYN 112

Query: 275 ATCAGGKVCLVGMGHHEMTVPLTPAAVREVDVVGVF-RYKNTWPLCLELLRSGKI 328
           +   GG   LVG+   EM +P+    +  + ++G     +      L+    GK+
Sbjct: 113 SIRRGGACVLVGLPPEEMPIPIFDTVLNGIKIIGSIVGTRKDLQEALQFAAEGKV 167

>d1o89a1 b.35.1.2 (A:1-115,A:293-323) Hypothetical protein YhdH {Escherichia coli [TaxId: 562]} Length = 146

class: All beta proteins
fold: GroES-like
superfamily: GroES-like
family: Alcohol dehydrogenase-like, N-terminal domain
domain: Hypothetical protein YhdH
species: Escherichia coli [TaxId: 562]

 Score = 45.6 bits (107), Expect = 1e-06
 Identities = 23/149 (15%), Positives = 39/149 (26%), Gaps = 30/149 (20%)

Query: 19  MAAWLL----GVNTLKIQPFELPSLGPYDVLVRMKAVGICGSDVHYLKTLRCADFVVKEP 74
           + A LL    G     +Q  +   L   DV V +    +   D   +        +   P
Sbjct: 1   LQALLLEQQDGKTLASVQTLDESRLPEGDVTVDVHWSSLNYKDALAIT--GKGKIIRNFP 58

Query: 75  MVIGHECAGVIEKVGSEVKTLVPGDRVALEPGISCWRCDHCKGGRYNLCPEMKFFATPPV 134
           M+ G + AG +              R      +                           
Sbjct: 59  MIPGIDFAGTVRT--------SEDPRFHAGQEVLLTGWGVG----------------ENH 94

Query: 135 HGSLANQVVHPADLCFKLPDNVSLEEGAM 163
            G LA Q     D    +P   + +E ++
Sbjct: 95  WGGLAEQARVKGDWLVAMPQGQAAKEISL 123

>d1llua2 c.2.1.1 (A:144-309) Alcohol dehydrogenase {Pseudomonas aeruginosa [TaxId: 287]} Length = 166

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Alcohol dehydrogenase-like, C-terminal domain
domain: Alcohol dehydrogenase
species: Pseudomonas aeruginosa [TaxId: 287]

 Score = 45.8 bits (107), Expect = 1e-06
 Identities = 37/174 (21%), Positives = 66/174 (37%), Gaps = 12/174 (6%)

Query: 156 VSLEEGA--MCEPLSVGLHACRRANIGPETNVLIMGAGPIGLVTMLGAPRAFGAPRIVIV 213
           V   E A  +C  ++V     ++ N  P   V I G G +G V +  A        +  +
Sbjct: 1   VEFAEIAPILCAGVTV-YKGLKQTNARPGQWVAISGIGGLGHVAVQYAR--AMGLHVAAI 57

Query: 214 DVDDYRLSVAKEIGADNIVKVSTNLQDIAEEVEKIQKAMGTGIDVSFDCAGLNKTMSTAL 273
           D+DD +L +A+++GA   V          E+  +  +    G       A  N     A+
Sbjct: 58  DIDDAKLELARKLGASLTV------NARQEDPVEAIQRDIGGAHGVLVTAVSNSAFGQAI 111

Query: 274 GATCAGGKVCLVGMGHHEMTVPLTPAAVREVDVVGVFRY-KNTWPLCLELLRSG 326
           G    GG + LVG+   +   P+    ++ + + G     +      L+    G
Sbjct: 112 GMARRGGTIALVGLPPGDFPTPIFDVVLKGLHIAGSIVGTRADLQEALDFAGEG 165

>d1jvba2 c.2.1.1 (A:144-313) Alcohol dehydrogenase {Archaeon Sulfolobus solfataricus [TaxId: 2287]} Length = 170

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Alcohol dehydrogenase-like, C-terminal domain
domain: Alcohol dehydrogenase
species: Archaeon Sulfolobus solfataricus [TaxId: 2287]

 Score = 44.3 bits (103), Expect = 5e-06
 Identities = 38/159 (23%), Positives = 70/159 (44%), Gaps = 5/159 (3%)

Query: 170 GLHACRRANIGPETNVLIMGAGPIGLVTMLGAPRAFGAPRIVIVDVDDYRLSVAKEIGAD 229
              A R+A++ P   +L++GAG       +   +A     I+ VDV +  +  AK  GAD
Sbjct: 16  TYRAVRKASLDPTKTLLVVGAGGGLGTMAVQIAKAVSGATIIGVDVREEAVEAAKRAGAD 75

Query: 230 NIVKVSTNLQDIAEEVEKIQKAMGTGIDVSFDCAGLNKTMSTALGATCAGGKVCLVGMGH 289
            ++  S   QD   E+ +I ++ G    +  + +   KT+S    A    GK  +VG+  
Sbjct: 76  YVINASM--QDPLAEIRRITESKGVDAVIDLNNS--EKTLSVYPKALAKQGKYVMVGLFG 131

Query: 290 HEMTVPLTPAAVREVDVVGVFRY-KNTWPLCLELLRSGK 327
            ++        + E+  VG     ++ +   + L  +GK
Sbjct: 132 ADLHYHAPLITLSEIQFVGSLVGNQSDFLGIMRLAEAGK 170

>d1piwa2 c.2.1.1 (A:153-320) Cinnamyl alcohol dehydrogenase, ADH6 {Baker's yeast (Saccharomyces cerevisiae) [TaxId: 4932]} Length = 168

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Alcohol dehydrogenase-like, C-terminal domain
domain: Cinnamyl alcohol dehydrogenase, ADH6
species: Baker's yeast (Saccharomyces cerevisiae) [TaxId: 4932]

 Score = 43.4 bits (101), Expect = 8e-06
 Identities = 28/176 (15%), Positives = 56/176 (31%), Gaps = 12/176 (6%)

Query: 156 VSLEEGA--MCEPLSVGLHACRRANIGPETNVLIMGAGPIGLVTMLGAPRAFGAPRIVIV 213
           +     A  +C  L+V      R   GP   V I+G G IG +  L +        ++  
Sbjct: 1   IPSHLAAPLLCGGLTV-YSPLVRNGCGPGKKVGIVGLGGIGSMGTLISKAMGAETYVISR 59

Query: 214 DVDDYRLSVAKEIGADNIVKVSTNLQDIAEEVEKIQKAMGTGIDVSFDCAGLNKTMSTAL 273
                  +   ++GAD+         +  +  EK        +      +  +   +   
Sbjct: 60  SSRKREDA--MKMGADHY----IATLEEGDWGEKYFDTFDLIVV--CASSLTDIDFNIMP 111

Query: 274 GATCAGGKVCLVGMGHHEMTVPLTPAAVREVDVVGVFRY-KNTWPLCLELLRSGKI 328
            A   GG++  + +      + L P  ++ V +              L+L+    I
Sbjct: 112 KAMKVGGRIVSISIPEQHEMLSLKPYGLKAVSISYSALGSIKELNQLLKLVSEKDI 167

>d1gu7a1 b.35.1.2 (A:23-160,A:350-386) 2,4-dienoyl-CoA reductase {Yeast (Candida tropicalis) [TaxId: 5482]} Length = 175

class: All beta proteins
fold: GroES-like
superfamily: GroES-like
family: Alcohol dehydrogenase-like, N-terminal domain
domain: 2,4-dienoyl-CoA reductase
species: Yeast (Candida tropicalis) [TaxId: 5482]

 Score = 40.5 bits (93), Expect = 8e-05
 Identities = 18/175 (10%), Positives = 40/175 (22%), Gaps = 21/175 (12%)

Query: 26  VNTLKIQPFELPSLGPYDVLVRMKAVGICGSDVHYLKTLRCADFVVKEPMVIGHECAGVI 85
           V   +    +  +L P +V+V+     +  SD++ ++ +  +              A   
Sbjct: 18  VLFTQSFEIDDDNLAPNEVIVKTLGSPVNPSDINQIQGVYPSKPAKTTGFGTTEPAAPC- 76

Query: 86  EKVGSEVKTLVPGDRVALEPGISCWRCDHCKGGRYNLCPEMKFFATPPVHGSLANQVVHP 145
                                   +          +L        +    G+     +  
Sbjct: 77  -------------------GNEGLFEVIKVGSNVSSLEAGDWVIPSHVNFGTWRTHALGN 117

Query: 146 ADLCFKLPDNVSLEEGAMCEPLSVGLHACR-RANIGPETNVLIMGAGPIGLVTML 199
            D   KLP+    +       L+             P   +   G         L
Sbjct: 118 DDDFIKLPNPAQSKANGKPNGLTDAKSIETLYDGTKPLHELYQDGVANSKDGKQL 172

>d1qora1 b.35.1.2 (A:2-112,A:292-327) Quinone oxidoreductase {Escherichia coli [TaxId: 562]} Length = 147

class: All beta proteins
fold: GroES-like
superfamily: GroES-like
family: Alcohol dehydrogenase-like, N-terminal domain
domain: Quinone oxidoreductase
species: Escherichia coli [TaxId: 562]

 Score = 40.0 bits (92), Expect = 9e-05
 Identities = 26/166 (15%), Positives = 42/166 (25%), Gaps = 33/166 (19%)

Query: 25  GVNTLKIQPFELPSLGPYDVLVRMKAVGICGSDVHYLKTLRCADFVVKEPMVIGHECAGV 84
           G   L+   F        ++ V  KA+GI                    P  +G E AG+
Sbjct: 11  GPEVLQAVEFTPADPAENEIQVENKAIGIN---FIDTYIRSGLYPPPSLPSGLGTEAAGI 67

Query: 85  IEKVGSEVKTLVPGDRVALEPGISCWRCDHCKGGRYNLCPEMKFFATPPVHGSLANQVVH 144
           + KV                            G R                   ++    
Sbjct: 68  VSKV-------------------GSGVKHIKAGDRVVYAQSALGA--------YSSVHNI 100

Query: 145 PADLCFKLPDNVSLEEG-AMCEPLSVGL--HACRRANIGPETNVLI 187
            AD    LP  + ++       PL      H    +     +++LI
Sbjct: 101 IADKAAILPAAIKVDVAEQQKYPLKDAQRAHEILESRATQGSSLLI 146

>d1uufa2 c.2.1.1 (A:145-312) Hypothetical protein YahK {Escherichia coli [TaxId: 562]} Length = 168

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Alcohol dehydrogenase-like, C-terminal domain
domain: Hypothetical protein YahK
species: Escherichia coli [TaxId: 562]

 Score = 38.8 bits (89), Expect = 3e-04
 Identities = 24/157 (15%), Positives = 40/157 (25%), Gaps = 16/157 (10%)

Query: 159 EEGAMCEPLSVG----LHACRRANIGPETNVLIMGAGPIGLVTMLGAPRAFGAPRIVIVD 214
           E+ A   PL           R    GP   V ++G G +G + +  A             
Sbjct: 4   EQLAAVAPLLCAGITTYSPLRHWQAGPGKKVGVVGIGGLGHMGIKLAHAMGAHVVAFTTS 63

Query: 215 VDDYRLSVAKEIGADNIVKVSTNLQDIAEEVEKIQKAMGTGIDVSFDCAGLNKTMSTALG 274
                 +  K +GAD +         +         A     D   +       +     
Sbjct: 64  EAKREAA--KALGADEV---------VNSRNADEMAAHLKSFDFILNTVAAPHNLDDFTT 112

Query: 275 ATCAGGKVCLVGMGHHEMTVPLTPAAV-REVDVVGVF 310
                G + LVG        P     + +   + G  
Sbjct: 113 LLKRDGTMTLVGAPATPHKSPEVFNLIMKRRAIAGSM 149

>d1yb5a1 b.35.1.2 (A:6-120,A:295-329) Quinone oxidoreductase {Human (Homo sapiens) [TaxId: 9606]} Length = 150

class: All beta proteins
fold: GroES-like
superfamily: GroES-like
family: Alcohol dehydrogenase-like, N-terminal domain
domain: Quinone oxidoreductase
species: Human (Homo sapiens) [TaxId: 9606]

 Score = 37.3 bits (85), Expect = 9e-04
 Identities = 22/104 (21%), Positives = 40/104 (38%), Gaps = 3/104 (2%)

Query: 25  GVNTLKIQP-FELPSLGPYDVLVRMKAVGICGSDVHYLKTLRCADFVVKEPMVIGHECAG 83
           G   LK++    +P    + VL+++ A G+   + +          ++      G + AG
Sbjct: 13  GPEVLKLRSDIAVPIPKDHQVLIKVHACGVNPVETYIRSGTYSRKPLLPYTP--GSDVAG 70

Query: 84  VIEKVGSEVKTLVPGDRVALEPGISCWRCDHCKGGRYNLCPEMK 127
           VIE VG        GDRV     IS    ++     + +    +
Sbjct: 71  VIEAVGDNASAFKKGDRVFTSSTISGGYAEYALAADHTVYKLPE 114

>d2d1ya1 c.2.1.2 (A:2-249) Hypothetical protein TTHA0369 {Thermus thermophilus [TaxId: 274]} Length = 248

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Tyrosine-dependent oxidoreductases
domain: Hypothetical protein TTHA0369
species: Thermus thermophilus [TaxId: 274]

 Score = 37.5 bits (87), Expect = 0.001
 Identities = 20/84 (23%), Positives = 33/84 (39%), Gaps = 4/84 (4%)

Query: 184 NVLIMGAGP-IGLVTMLGAPRAFGAPRIVIVDVDDYRLSVAKEIGADNIVKVSTNLQDIA 242
            VL+ G    IG        R  GA  + + D+      VA+ IG         + ++  
Sbjct: 7   GVLVTGGARGIGRAIAQAFARE-GA-LVALCDLRPEGKEVAEAIGGAFFQVDLEDERERV 64

Query: 243 EEVEKIQKAMGTGIDVSFDCAGLN 266
             VE+   A+G  +DV  + A + 
Sbjct: 65  RFVEEAAYALG-RVDVLVNNAAIA 87

>d1iz0a1 b.35.1.2 (A:1-98,A:270-302) Quinone oxidoreductase {Thermus thermophilus [TaxId: 274]} Length = 131

class: All beta proteins
fold: GroES-like
superfamily: GroES-like
family: Alcohol dehydrogenase-like, N-terminal domain
domain: Quinone oxidoreductase
species: Thermus thermophilus [TaxId: 274]

 Score = 35.6 bits (81), Expect = 0.002
 Identities = 24/162 (14%), Positives = 41/162 (25%), Gaps = 45/162 (27%)

Query: 29  LKIQPFELPSLGPYDVLVRMKAVGICGSDVHYLKTLRCADFVVKEPMVIGHECAGVIEKV 88
           L++     P     +V++R++AVG+  +D                P + G E  GV    
Sbjct: 13  LELVDLPEPEAEEGEVVLRVEAVGLNFADHLMRLGAYLTRL--HPPFIPGMEVVGV---- 66

Query: 89  GSEVKTLVPGDRVALEPGISCWRCDHCKGGRYNLCPEMKFFATPPVHGSLANQVVHPADL 148
                                                          G LA +V  P   
Sbjct: 67  ---------------------VEGRRYAALVP--------------QGGLAERVAVPKGA 91

Query: 149 CFKLPDNVSLEEGA-MCEPLSVGLHAC-RRANIGPETNVLIM 188
              LP+   +               A   R + G +  V+ +
Sbjct: 92  LLPLPEGRPVVGPVFPFAEAEAAFRALLDRGHTG-KV-VVRL 131

Homologous Domains Detected by HHsearch

Original result of HHsearch against SCOP70(version1.75) database

ID	Length	Definition	Probability
Query	365
d1e3ja1	178	Ketose reductase (sorbitol dehydrogenase) {Silverl	100.0
d1pl8a1	185	Ketose reductase (sorbitol dehydrogenase) {Human (	100.0
d1h2ba1	171	Alcohol dehydrogenase {Archaeon Aeropyrum pernix [	100.0
d1llua1	175	Alcohol dehydrogenase {Pseudomonas aeruginosa [Tax	100.0
d1cdoa1	199	Alcohol dehydrogenase {Cod (Gadus callarias) [TaxI	100.0
d1vj0a1	184	Hypothetical protein TM0436 {Thermotoga maritima [	100.0
d1f8fa1	194	Benzyl alcohol dehydrogenase {Acinetobacter calcoa	100.0
d1e3ia1	202	Alcohol dehydrogenase {Mouse (Mus musculus), class	99.98
d1piwa1	192	Cinnamyl alcohol dehydrogenase, ADH6 {Baker's yeas	99.98
d1jvba1	177	Alcohol dehydrogenase {Archaeon Sulfolobus solfata	99.98
d2fzwa1	197	Alcohol dehydrogenase {Human (Homo sapiens), diffe	99.98
d1rjwa1	171	Alcohol dehydrogenase {Bacillus stearothermophilus	99.97
d1kola1	201	Formaldehyde dehydrogenase {Pseudomonas putida [Ta	99.97
d1p0fa1	198	Alcohol dehydrogenase {Frog (Rana perezi) [TaxId:	99.97
d1jqba1	177	Bacterial secondary alcohol dehydrogenase {Clostri	99.97
d1uufa1	179	Hypothetical protein YahK {Escherichia coli [TaxId	99.97
d2jhfa1	198	Alcohol dehydrogenase {Horse (Equus caballus) [Tax	99.96
d1yb5a1	150	Quinone oxidoreductase {Human (Homo sapiens) [TaxI	99.96
d1pl8a2	171	Ketose reductase (sorbitol dehydrogenase) {Human (	99.96
d1e3ja2	170	Ketose reductase (sorbitol dehydrogenase) {Silverl	99.96
d1qora1	147	Quinone oxidoreductase {Escherichia coli [TaxId: 5	99.94
d1xa0a1	152	B. subtilis YhfP homologue {Bacillus stearothermop	99.93
d1iz0a1	131	Quinone oxidoreductase {Thermus thermophilus [TaxI	99.93
d1jqba2	174	Bacterial secondary alcohol dehydrogenase {Clostri	99.92
d1jvba2	170	Alcohol dehydrogenase {Archaeon Sulfolobus solfata	99.92
d1f8fa2	174	Benzyl alcohol dehydrogenase {Acinetobacter calcoa	99.92
d1yb5a2	174	Quinone oxidoreductase {Human (Homo sapiens) [TaxI	99.91
d1e3ia2	174	Alcohol dehydrogenase {Mouse (Mus musculus), class	99.91
d1llua2	166	Alcohol dehydrogenase {Pseudomonas aeruginosa [Tax	99.91
d1p0fa2	174	Alcohol dehydrogenase {Frog (Rana perezi) [TaxId:	99.91
d1o89a1	146	Hypothetical protein YhdH {Escherichia coli [TaxId	99.91
d1h2ba2	172	Alcohol dehydrogenase {Archaeon Aeropyrum pernix [	99.9
d1vj0a2	182	Hypothetical protein TM0436 {Thermotoga maritima [	99.9
d1rjwa2	168	Alcohol dehydrogenase {Bacillus stearothermophilus	99.9
d1gu7a1	175	2,4-dienoyl-CoA reductase {Yeast (Candida tropical	99.9
d2fzwa2	176	Alcohol dehydrogenase {Human (Homo sapiens), diffe	99.9
d1tt7a1	162	Hypothetical protein YhfP {Bacillus subtilis [TaxI	99.9
d1pqwa_	183	Putative enoyl reductase domain of polyketide synt	99.89
d1piwa2	168	Cinnamyl alcohol dehydrogenase, ADH6 {Baker's yeas	99.89
d1xa0a2	176	B. subtilis YhfP homologue {Bacillus stearothermop	99.89
d1v3va2	182	Leukotriene b4 12-hydroxydehydrogenase/prostagland	99.88
d1gu7a2	189	2,4-dienoyl-CoA reductase {Yeast (Candida tropical	99.88
d1iz0a2	171	Quinone oxidoreductase {Thermus thermophilus [TaxI	99.88
d1cdoa2	175	Alcohol dehydrogenase {Cod (Gadus callarias) [TaxI	99.87
d2jhfa2	176	Alcohol dehydrogenase {Horse (Equus caballus) [Tax	99.87
d1qora2	179	Quinone oxidoreductase {Escherichia coli [TaxId: 5	99.87
d1uufa2	168	Hypothetical protein YahK {Escherichia coli [TaxId	99.87
d1d1ta2	176	Alcohol dehydrogenase {Human (Homo sapiens), diffe	99.87
d1kola2	195	Formaldehyde dehydrogenase {Pseudomonas putida [Ta	99.87
d1vj1a2	187	Putative zinc-binding alcohol dehydrogenase {Mouse	99.83
d1o89a2	177	Hypothetical protein YhdH {Escherichia coli [TaxId	99.77
d1tt7a2	167	Hypothetical protein YhfP {Bacillus subtilis [TaxI	99.76
d1vj1a1	166	Putative zinc-binding alcohol dehydrogenase {Mouse	99.66
d1v3va1	147	Leukotriene b4 12-hydroxydehydrogenase/prostagland	99.65
d1o8ca2	77	Hypothetical protein YhdH {Escherichia coli [TaxId	99.35
d1pjca1	168	L-alanine dehydrogenase {Phormidium lapideum [TaxI	97.6
d1jg1a_	215	Protein-L-isoaspartyl O-methyltransferase {Archaeo	97.56
d2d1ya1	248	Hypothetical protein TTHA0369 {Thermus thermophilu	97.54
d1l7da1	183	Nicotinamide nucleotide transhydrogenase dI compon	97.53
d1npya1	167	Shikimate 5-dehydrogenase-like protein HI0607 {Hae	97.47
d1dl5a1	213	Protein-L-isoaspartyl O-methyltransferase {Thermot	97.43
d1yb2a1	250	Hypothetical protein Ta0852 {Thermoplasma acidophi	97.32
d1o54a_	266	Hypothetical protein TM0748 {Thermotoga maritima [	97.31
d1gpja2	159	Glutamyl tRNA-reductase middle domain {Archaeon Me	97.29
d1ulsa_	242	beta-keto acyl carrier protein reductase {Thermus	97.17
d1wmaa1	275	Carbonyl reductase/20beta-hydroxysteroid dehydroge	97.14
d1ydea1	250	Retinal dehydrogenase/reductase 3 {Human (Homo sap	97.13
d1q7ba_	243	beta-keto acyl carrier protein reductase {Escheric	97.13
d1vbfa_	224	Protein-L-isoaspartyl O-methyltransferase {Sulfolo	97.1
d2ag5a1	245	Dehydrogenase/reductase SDR family member 6, DHRS6	97.06
d1pjqa1	113	Siroheme synthase CysG, domain 1 {Salmonella typhi	97.03
d1pr9a_	244	Carbonyl reductase {Human (Homo sapiens) [TaxId: 9	97.03
d1i1na_	224	Protein-L-isoaspartyl O-methyltransferase {Human (	97.02
d1ae1a_	258	Tropinone reductase {Jimsonweed (Datura stramonium	97.02
d2ae2a_	259	Tropinone reductase {Jimsonweed (Datura stramonium	96.92
d1xq1a_	259	Tropinone reductase {Thale cress (Arabidopsis thal	96.92
d1i9ga_	264	Probable methyltransferase Rv2118c {Mycobacterium	96.88
d1cyda_	242	Carbonyl reductase {Mouse (Mus musculus) [TaxId: 1	96.87
d1kpia_	291	CmaA2 {Mycobacterium tuberculosis [TaxId: 1773]}	96.86
d1nffa_	244	Putative oxidoreductase Rv2002 {Mycobacterium tube	96.84
d1kpga_	285	CmaA1 {Mycobacterium tuberculosis [TaxId: 1773]}	96.82
d1luaa1	191	Methylene-tetrahydromethanopterin dehydrogenase {M	96.78
d1w6ua_	294	2,4-dienoyl-CoA reductase, mitochondrial (DECR) {H	96.77
d1hdca_	254	3-alpha,20-beta-hydroxysteroid dehydrogenase {Stre	96.73
d1hxha_	253	3beta/17beta hydroxysteroid dehydrogenase {Comamon	96.73
d1k2wa_	256	Sorbitol dehydrogenase {Rhodobacter sphaeroides [T	96.72
d1yb1a_	244	17-beta-hydroxysteroid dehydrogenase type XI {Huma	96.69
d2fk8a1	280	Methoxy mycolic acid synthase 4, Mma4 {Mycobacteri	96.66
d1r18a_	223	Protein-L-isoaspartyl O-methyltransferase {Fruit f	96.65
d2b25a1	324	Hypothetical protein FLJ20628 {Human (Homo sapiens	96.65
d1zk4a1	251	R-specific alcohol dehydrogenase {Lactobacillus br	96.65
d2bgka1	268	Rhizome secoisolariciresinol dehydrogenase {Mayapp	96.63
d1sbya1	254	Drosophila alcohol dehydrogenase {Fly (Drosophila	96.59
d1xg5a_	257	Putative dehydrogenase ARPG836 (MGC4172) {Human (H	96.59
d1vl8a_	251	Gluconate 5-dehydrogenase {Thermotoga maritima [Ta	96.59
d1xu9a_	269	11-beta-hydroxysteroid dehydrogenase 1 {Human (Hom	96.58
d1bdba_	276	Cis-biphenyl-2,3-dihydrodiol-2,3-dehydrogenase {Ps	96.58
d1dhra_	236	Dihydropteridin reductase (pteridine reductase) {R	96.49
d1fmca_	255	7-alpha-hydroxysteroid dehydrogenase {Escherichia	96.48
d1zema1	260	Xylitol dehydrogenase {Gluconobacter oxydans [TaxI	96.47
d2gdza1	254	15-hydroxyprostaglandin dehydrogenase, PGDH {Human	96.44
d1yo6a1	250	Putative carbonyl reductase sniffer {Caenorhabditi	96.42
d1nyta1	170	Shikimate 5-dehydrogenase AroE {Escherichia coli [	96.4
d2a4ka1	241	beta-keto acyl carrier protein reductase {Thermus	96.39
d1xhla_	274	Hypothetical protein F25D1.5 {Caenorhabditis elega	96.38
d1ja9a_	259	1,3,6,8-tetrahydroxynaphthalene reductase {Rice bl	96.38
d1ulua_	256	Enoyl-ACP reductase {Thermus thermophilus [TaxId:	96.36
d1nkva_	245	Hypothetical Protein YjhP {Escherichia coli [TaxId	96.34
d1o5ia_	234	beta-keto acyl carrier protein reductase {Thermoto	96.33
d1iy8a_	258	Levodione reductase {Corynebacterium aquaticum [Ta	96.32
d1xkqa_	272	Hypothetical protein R05D8.7 {Caenorhabditis elega	96.31
d1g0oa_	272	1,3,8-trihydroxynaphtalene reductase (THNR, naphto	96.31
d1yxma1	297	Peroxisomal trans 2-enoyl CoA reductase {Human (Ho	96.28
d2rhca1	257	beta-keto acyl carrier protein reductase {Streptom	96.26
d1h5qa_	260	Mannitol dehydrogenase {Mushroom (Agaricus bisporu	96.22
d2ew8a1	247	(s)-1-phenylethanol dehydrogenase {Azoarcus sp. eb	96.19
d1xxla_	234	Hypothetical protein YcgJ {Bacillus subtilis [TaxI	96.18
d1e5qa1	182	Saccharopine reductase {Rice blast fungus (Magnapo	96.15
d1lssa_	132	Ktn Mja218 {Archaeon Methanococcus jannaschii [Tax	96.15
d1spxa_	264	Glucose dehydrogenase (5l265) {Nematode (Caenorhab	96.14
d1geea_	261	Glucose dehydrogenase {Bacillus megaterium [TaxId:	96.12
d2c07a1	251	beta-keto acyl carrier protein reductase {Malaria	96.12
d2avna1	246	Hypothetical methyltransferase TM1389 {Thermotoga	96.11
d1ooea_	235	Dihydropteridin reductase (pteridine reductase) {N	96.04
d1pjza_	201	Thiopurine S-methyltransferase {Pseudomonas syring	96.04
d2nxca1	254	PrmA-like protein TTHA0656 (TT0836) {Thermus therm	96.01
d2f1ka2	165	Prephenate dehydrogenase TyrA {Synechocystis sp. p	96.01
d1vl5a_	231	Hypothetical protein BH2331 {Bacillus halodurans [	96.01
d1vi2a1	182	Putative shikimate dehydrogenase YdiB {Escherichia	95.99
d1hdoa_	205	Biliverdin IX beta reductase {Human (Homo sapiens)	95.97
d1uzma1	237	beta-keto acyl carrier protein reductase {Mycobact	95.96
d2fr1a1	259	Erythromycin synthase, eryAI, 1st ketoreductase mo	95.91
d1gega_	255	meso-2,3-butanediol dehydrogenase {Klebsiella pneu	95.9
d1nw3a_	328	Catalytic, N-terminal domain of histone methyltran	95.86
d1edoa_	244	beta-keto acyl carrier protein reductase {Oil seed	95.84
d1bg6a2	184	N-(1-D-carboxylethyl)-L-norvaline dehydrogenase {A	95.78
d1gz6a_	302	(3R)-hydroxyacyl-CoA dehydrogenase domain of estra	95.71
d1snya_	248	Carbonyl reductase sniffer {Fruit fly (Drosophila	95.7
d1zmta1	252	Halohydrin dehalogenase HheC {Agrobacterium tumefa	95.69
d2hmva1	134	Ktn bsu222 {Bacillus subtilis [TaxId: 1423]}	95.65
d1u2za_	406	Catalytic, N-terminal domain of histone methyltran	95.59
d2pd4a1	274	Enoyl-ACP reductase {Helicobacter pylori [TaxId: 2	95.56
d2g5ca2	171	Prephenate dehydrogenase TyrA {Aquifex aeolicus [T	95.53
d2o57a1	282	Putative sarcosine dimethylglycine methyltransfera	95.53
d2czca2	172	Glyceraldehyde-3-phosphate dehydrogenase (GAPDH) {	95.5
d1x1ta1	260	D(-)-3-hydroxybutyrate dehydrogenase {Pseudomonas	95.47
d1nt2a_	209	Fibrillarin homologue {Archaeon Archaeoglobus fulg	95.4
d1l3ia_	186	Precorrin-6Y methyltransferase (CbiT) {Archaeon Me	95.38
d2bd0a1	240	Bacterial sepiapterin reductase {Chlorobium tepidu	95.29
d1qsga_	258	Enoyl-ACP reductase {Escherichia coli [TaxId: 562]	95.21
d2bzga1	229	Thiopurine S-methyltransferase {Human (Homo sapien	95.06
d1yqga2	152	Pyrroline-5-carboxylate reductase ProC {Neisseria	94.97
d1p77a1	171	Shikimate 5-dehydrogenase AroE {Haemophilus influe	94.9
d1cf2o1	171	Glyceraldehyde-3-phosphate dehydrogenase (GAPDH) {	94.79
d1li4a1	163	S-adenosylhomocystein hydrolase {Human (Homo sapie	94.73
d1c1da1	201	Phenylalanine dehydrogenase {Rhodococcus sp., M4 [	94.61
d2o23a1	248	Type II 3-hydroxyacyl-CoA dehydrogenase {Human (Ho	94.57
d1zx0a1	229	Guanidinoacetate methyltransferase {Human (Homo sa	94.49
d1g8aa_	227	Fibrillarin homologue {Archaeon Pyrococcus horikos	94.44
d1b7go1	178	Glyceraldehyde-3-phosphate dehydrogenase (GAPDH) {	94.41
d1ve3a1	226	Hypothetical protein PH0226 {Archaeon Pyrococcus h	94.32
d2as0a2	324	Hypothetical protein PH1915, middle and C-terminal	94.3
d1yl7a1	135	Dihydrodipicolinate reductase {Mycobacterium tuber	94.21
d1g8sa_	230	Fibrillarin homologue {Archaeon Methanococcus jann	94.2
d1nvmb1	157	Acetaldehyde dehydrogenase (acylating) {Pseudomona	94.16
d1oaaa_	259	Sepiapterin reductase {Mouse (Mus musculus) [TaxId	94.11
d2jfga1	93	UDP-N-acetylmuramoyl-L-alanine:D-glutamate ligase	94.1
d1vpda2	161	Hydroxyisobutyrate dehydrogenase {Salmonella typhi	93.83
d2h7ma1	268	Enoyl-ACP reductase {Mycobacterium tuberculosis, T	93.82
d1wzna1	251	Hypothetical methyltransferase PH1305 {Archaeon Py	93.76
d1iy9a_	274	Spermidine synthase {Bacillus subtilis [TaxId: 142	93.74
d2q46a1	252	Hypothetical protein At5g02240 (T7H20_290) {Thale	93.68
d1jbqa_	355	Cystathionine beta-synthase {Human (Homo sapiens)	93.62
d1ldna1	148	Lactate dehydrogenase {Bacillus stearothermophilus	93.59
d1ydwa1	184	Probable oxidoreductase At4g09670 {Thale cress (Ar	93.43
d1jtva_	285	Human estrogenic 17beta-hydroxysteroid dehydrogena	93.37
d1v8ba1	163	S-adenosylhomocystein hydrolase {Plasmodium falcip	93.34
d2b2ca1	312	Spermidine synthase {Caenorhabditis elegans [TaxId	93.29
d1xj5a_	290	Spermidine synthase {Thale cress (Arabidopsis thal	93.26
d1mxha_	266	Dihydropteridin reductase (pteridine reductase) {T	93.22
d1jw9b_	247	Molybdenum cofactor biosynthesis protein MoeB {Esc	93.05
d1inla_	295	Spermidine synthase {Thermotoga maritima [TaxId: 2	92.97
d2bkaa1	232	TAT-interacting protein TIP30 {Human (Homo sapiens	92.93
d2o07a1	285	Spermidine synthase {Human (Homo sapiens) [TaxId:	92.88
d1wxxa2	318	Hypothetical protein TTHA1280, middle and C-termin	92.78
d2fyta1	311	Protein arginine N-methyltransferase 3, PRMT3 {Hum	92.7
d2i6ga1	198	Putative methyltransferase TehB {Salmonella typhim	92.69
d2bhsa1	292	O-acetylserine sulfhydrylase (Cysteine synthase) {	92.69
d1gtea4	196	Dihydropyrimidine dehydrogenase, domain 2 {Pig (Su	92.68
d1y1pa1	342	Aldehyde reductase II {Sporobolomyces salmonicolor	92.45
d2frna1	260	Hypothetical protein PH0793 {Pyrococcus horikoshii	92.44
d1im8a_	225	Hypothetical protein HI0319 (YecO) {Haemophilus in	92.24
d1uira_	312	Spermidine synthase {Thermus thermophilus [TaxId:	92.19
d1dusa_	194	Hypothetical protein MJ0882 {Archaeon Methanococcu	92.15
d1orra_	338	CDP-tyvelose-2-epimerase {Salmonella typhi [TaxId:	92.12
d2b78a2	317	Hypothetical protein SMu776, middle and C-terminal	92.03
d1udca_	338	Uridine diphosphogalactose-4-epimerase (UDP-galact	92.0
d3cuma2	162	Hydroxyisobutyrate dehydrogenase {Pseudomonas aeru	91.92
d1r0ka2	150	1-deoxy-D-xylulose-5-phosphate reductoisomerase {Z	91.9
d2ahra2	152	Pyrroline-5-carboxylate reductase ProC {Streptococ	91.87
d1zh8a1	181	Hypothetical protein TM0312 {Thermotoga maritima [	91.86
d1kjqa2	111	Glycinamide ribonucleotide transformylase PurT, N-	91.83
d3etja2	78	N5-carboxyaminoimidazole ribonucleotide synthetase	91.79
d1e7wa_	284	Dihydropteridin reductase (pteridine reductase) {L	91.78
d1ri5a_	252	mRNA cap (Guanine N-7) methyltransferase {Fungus (	91.77
d1y7la1	310	O-acetylserine sulfhydrylase (Cysteine synthase) {	91.68
d2fcaa1	204	tRNA (guanine-N(7)-)-methyltransferase TrmB {Bacil	91.59
d1ks9a2	167	Ketopantoate reductase PanE {Escherichia coli [Tax	91.48
d1rkxa_	356	CDP-glucose-4,6-dehydratase {Yersinia pseudotuberc	91.48
d1oria_	316	Protein arginine N-methyltransferase 1, PRMT1 {Rat	91.37
d1xeaa1	167	Putative oxidoreductase VCA1048 {Vibrio cholerae [	91.35
d1vm6a3	128	Dihydrodipicolinate reductase {Thermotoga maritima	91.21
d1y8ca_	246	Putative methyltransferase CAC2371 {Clostridium ac	91.19
d1h6da1	221	Glucose-fructose oxidoreductase, N-terminal domain	91.05
d1p91a_	268	rRNA methyltransferase RlmA {Escherichia coli [Tax	90.96
d1i24a_	393	Sulfolipid biosynthesis protein SQD1 {Thale cress	90.82
d1f0ya2	192	Short chain L-3-hydroxyacyl CoA dehydrogenase {Hum	90.74
d1mjfa_	276	Putative spermidine synthetase PF0127 (SpeE) {Arch	90.55
d1d7ya2	121	NADH-dependent ferredoxin reductase, BphA4 {Pseudo	90.43
d1ne2a_	197	Hypothetical protein Ta1320 {Archaeon Thermoplasma	90.4
d1fjha_	257	3-alpha-hydroxysteroid dehydrogenase {Comamonas te	90.3
d1j5pa4	132	Hypothetical protein TM1643 {Thermotoga maritima [	90.26
d2voua1	265	Dihydroxypyridine hydroxylase DhpH {Arthrobacter n	90.22
d2p7ia1	225	Hypothetical protein ECA1738 {Erwinia carotovora [	90.22
d1tlta1	164	Virulence factor MviM {Escherichia coli [TaxId: 56	90.17
d1g6q1_	328	Arginine methyltransferase, HMT1 {Baker's yeast (S	90.15
d1leha1	230	Leucine dehydrogenase {Bacillus sphaericus [TaxId:	90.03
d1nvta1	177	Shikimate 5-dehydrogenase AroE {Archaeon Methanoco	89.9
d2gh1a1	281	Methyltransferase BC2162 {Bacillus cereus [TaxId:	89.68
d1uaya_	241	Type II 3-hydroxyacyl-CoA dehydrogenase {Thermus t	89.68
d1mo9a2	121	NADH-dependent 2-ketopropyl coenzyme M oxidoreduct	89.53
d1qyda_	312	Pinoresinol-lariciresinol reductase {Giant arborvi	89.44
d1j6ua1	89	UDP-N-acetylmuramate-alanine ligase MurC {Thermoto	89.29
d2ex4a1	222	Adrenal gland protein AD-003 (C9orf32) {Human (Hom	89.21
d1id1a_	153	Rck domain from putative potassium channel Kch {Es	89.18
d1xvaa_	292	Glycine N-methyltransferase {Rat (Rattus norvegicu	89.02
d1gdha1	191	D-glycerate dehydrogenase {Hyphomicrobium methylov	88.98
d1ps9a3	179	2,4-dienoyl-CoA reductase, middle domain {Escheric	88.86
d2c5aa1	363	GDP-mannose-3', 5'-epimerase {Thale cress (Arabido	88.78
d3lada2	119	Dihydrolipoamide dehydrogenase {Azotobacter vinela	88.73
d1seza1	373	Protoporphyrinogen oxidase {Tobacco (Nicotiana tab	88.53
d1nhpa2	123	NADH peroxidase {Enterococcus faecalis [TaxId: 135	88.27
d1llda1	143	Lactate dehydrogenase {Bifidobacterium longum, str	88.21
d1f06a1	170	Diaminopimelic acid dehydrogenase (DAPDH) {Coryneb	88.1
d1wkva1	382	O-acetylserine sulfhydrylase (Cysteine synthase) {	88.01
d1sqga2	284	Ribosomal RNA small subunit methyltransferase B, R	87.96
d3c96a1	288	Monooxygenase PhzS {Pseudomonas aeruginosa [TaxId:	87.95
d1z7wa1	320	O-acetylserine sulfhydrylase (Cysteine synthase) {	87.89
d1fcja_	302	O-acetylserine sulfhydrylase (Cysteine synthase) {	87.83
d2pgda2	176	6-phosphogluconate dehydrogenase {Sheep (Ovis orie	87.83
d1diha1	162	Dihydrodipicolinate reductase {Escherichia coli [T	87.79
d1xtpa_	254	Hypothetical protein Lmaj004091aaa (LmjF30.0810) {	87.78
d2naca1	188	Formate dehydrogenase {Pseudomonas sp., strain 101	87.68
d1omoa_	320	Archaeal alanine dehydrogenase {Archaeon Archaeogl	87.59
d1v9la1	242	Glutamate dehydrogenase {Pyrobaculum islandicum [T	87.58
d1n7ha_	339	GDP-mannose 4,6-dehydratase {Thale-cress (Arabidop	87.43
d1vlma_	208	Possible histamine N-methyltransferase TM1293 {The	87.2
d1jaya_	212	Coenzyme F420H2:NADP+ oxidoreductase (FNO) {Archae	87.1
d1vl0a_	281	DTDP-4-dehydrorhamnose reductase RfbD {Clostridium	87.08
d2blla1	342	Polymyxin resistance protein ArnA (PrmI) {Escheric	86.68
d1y6ja1	142	Lactate dehydrogenase {Clostridium thermocellum [T	86.63
d1p3da1	96	UDP-N-acetylmuramate-alanine ligase MurC {Haemophi	86.59
d1wdka3	186	Fatty oxidation complex alpha subunit, middle doma	86.57
d1djqa3	233	Trimethylamine dehydrogenase, middle domain {Methy	86.52
d1xgka_	350	Negative transcriptional regulator NmrA {Aspergill	86.46
d2dula1	375	N(2),N(2)-dimethylguanosine tRNA methyltransferase	86.35
d1mlda1	144	Malate dehydrogenase {Pig (Sus scrofa) [TaxId: 982	86.32
d1kewa_	361	dTDP-glucose 4,6-dehydratase (RmlB) {Streptococcus	86.31
d1qyca_	307	Phenylcoumaran benzylic ether reductase {Loblolly	86.31
d1z45a2	347	Uridine diphosphogalactose-4-epimerase (UDP-galact	86.29
d1j4aa1	197	D-lactate dehydrogenase {Lactobacillus helveticus	86.21
d1ebda2	117	Dihydrolipoamide dehydrogenase {Bacillus stearothe	86.18
d2nvwa1	237	Galactose/lactose metabolism regulatory protein GA	86.07
d2pv7a2	152	Prephenate dehydrogenase TyrA {Haemophilus influen	86.02
d1gtma1	239	Glutamate dehydrogenase {Archaeon Pyrococcus furio	85.93
d1onfa2	117	Glutathione reductase {Plasmodium falciparum [TaxI	85.9
d1b5qa1	347	Polyamine oxidase {Maize (Zea mays) [TaxId: 4577]}	85.64
d1ek6a_	346	Uridine diphosphogalactose-4-epimerase (UDP-galact	85.44
d1dssg1	169	Glyceraldehyde-3-phosphate dehydrogenase (GAPDH) {	85.41
d1u8fo1	169	Glyceraldehyde-3-phosphate dehydrogenase (GAPDH) {	85.08
d1uh5a_	329	Enoyl-ACP reductase {Malaria parasite (Plasmodium	84.89
d1db3a_	357	GDP-mannose 4,6-dehydratase {Escherichia coli [Tax	84.77
d1b26a1	234	Glutamate dehydrogenase {Thermotoga maritima [TaxI	84.66
d1dxya1	199	D-2-hydroxyisocaproate dehydrogenase {Lactobacillu	84.48
d1bgva1	255	Glutamate dehydrogenase {Clostridium symbiosum [Ta	84.15
d1k0ia1	292	p-Hydroxybenzoate hydroxylase, PHBH {Pseudomonas a	84.11
d1jqea_	280	Histamine methyltransferase {Human (Homo sapiens)	83.82
d1qp8a1	181	Putative formate dehydrogenase {Archaeon Pyrobacul	83.59
d1ixka_	313	Hypothetical methyltransferase PH1374 {Archaeon Py	83.56
d1kyqa1	150	Bifunctional dehydrogenase/ferrochelatase Met8p, N	83.55
d1mx3a1	193	Transcription corepressor CtbP {Human (Homo sapien	83.48
d1d7oa_	297	Enoyl-ACP reductase {Oil seed rape (Brassica napus	83.45
d2i76a2	153	Hypothetical protein TM1727 {Thermotoga maritima [	83.43
d1yzha1	204	tRNA (guanine-N(7)-)-methyltransferase TrmB {Strep	83.42
d1tdja1	331	Threonine deaminase {Escherichia coli [TaxId: 562]	83.35
d2iida1	370	L-aminoacid oxidase {Malayan pit viper (Calloselas	83.27
d1gy8a_	383	Uridine diphosphogalactose-4-epimerase (UDP-galact	83.19
d1guza1	142	Malate dehydrogenase {Chlorobium vibrioforme [TaxI	83.18
d1mv8a2	202	GDP-mannose 6-dehydrogenase {Pseudomonas aeruginos	83.12
d1rpna_	321	GDP-mannose 4,6-dehydratase {Pseudomonas aeruginos	83.03
d1i0za1	160	Lactate dehydrogenase {Human (Homo sapiens), heart	83.02
d1c0pa1	268	D-aminoacid oxidase, N-terminal domain {Rhodotorul	83.01
d1pzga1	154	Lactate dehydrogenase {Toxoplasma gondii [TaxId: 5	82.99
d1i36a2	152	Conserved hypothetical protein MTH1747 {Archaeon M	82.95
d1gtea3	153	Dihydropyrimidine dehydrogenase, domain 3 {Pig (Su	82.84
d1hwxa1	293	Glutamate dehydrogenase {Cow (Bos taurus) [TaxId:	82.83
d1gesa2	116	Glutathione reductase {Escherichia coli [TaxId: 56	82.82
d1v59a2	122	Dihydrolipoamide dehydrogenase {Baker's yeast (Sac	82.55
d1p3ha_	99	Chaperonin-10 (GroES) {Mycobacterium tuberculosis	82.46
d1q0qa2	151	1-deoxy-D-xylulose-5-phosphate reductoisomerase {E	82.43
d1susa1	227	Caffeoyl-CoA O-methyltransferase {Alfalfa (Medicag	82.3
d2bi7a1	314	UDP-galactopyranose mutase, N-terminal domain {Kle	81.92
d1tw3a2	253	Carminomycin 4-O-methyltransferase {Streptomyces p	81.86
d1fcda1	186	Flavocytochrome c sulfide dehydrogenase, FCSD, fla	81.74
d1q1ra2	133	Putidaredoxin reductase {Pseudomonas putida [TaxId	81.65
d1h6va2	122	Mammalian thioredoxin reductase {Rat (Rattus norve	81.44
d1ej0a_	180	RNA methyltransferase FtsJ {Escherichia coli [TaxI	81.32
d1x7da_	340	Ornithine cyclodeaminase {Pseudomonas putida [TaxI	81.16
d1ygya1	184	Phosphoglycerate dehydrogenase {Mycobacterium tube	81.12
d1gado1	166	Glyceraldehyde-3-phosphate dehydrogenase (GAPDH) {	80.8
d1ez4a1	146	Lactate dehydrogenase {Lactobacillus pentosus [Tax	80.76
d1lvla2	115	Dihydrolipoamide dehydrogenase {Pseudomonas putida	80.57
d2dw4a2	449	Lysine-specific histone demethylase 1, LSD1 {Human	80.52
d1obfo1	173	Glyceraldehyde-3-phosphate dehydrogenase (GAPDH) {	80.3
d1o58a_	293	O-acetylserine sulfhydrylase (Cysteine synthase) {	80.26
d3grsa2	125	Glutathione reductase {Human (Homo sapiens) [TaxId	80.14
d1ojta2	125	Dihydrolipoamide dehydrogenase {Neisseria meningit	80.06

>d1e3ja1 b.35.1.2 (A:4-142,A:313-351) Ketose reductase (sorbitol dehydrogenase) {Silverleaf whitefly (Bemisia argentifolii) [TaxId: 77855]}

class: All beta proteins
fold: GroES-like
superfamily: GroES-like
family: Alcohol dehydrogenase-like, N-terminal domain
domain: Ketose reductase (sorbitol dehydrogenase)
species: Silverleaf whitefly (Bemisia argentifolii) [TaxId: 77855]

Probab=100.00  E-value=1.3e-38  Score=260.71  Aligned_cols=173  Identities=46%  Similarity=0.820  Sum_probs=162.5

Q ss_pred             ceeEEEecCCceEEEEecCCCCCCCcEEEEEeeeeeCcccHhhhhccccCCccCCCCcccCccceEEEEEeCCCCCCCCC
Q 017868           18 NMAAWLLGVNTLKIQPFELPSLGPYDVLVRMKAVGICGSDVHYLKTLRCADFVVKEPMVIGHECAGVIEKVGSEVKTLVP   97 (365)
Q Consensus        18 ~~~~~~~~~~~l~~~~~~~p~~~~~eVlI~v~~~~l~~~D~~~~~g~~~~~~~~~~p~~~G~e~~G~V~~vG~~v~~~~~   97 (365)
                      +++++++++++|+++++|+|+|+++||||||.+++||++|++.+.+.........+|.++|||++|+|+++|+++++|++
T Consensus         2 ~maAVl~g~~~l~~~e~~~P~~~~~evlVkv~a~gic~sD~~~~~~~~~~~~~~~~p~i~GhE~~G~Vv~vG~~v~~~~~   81 (178)
T d1e3ja1           2 NLSAVLYKQNDLRLEQRPIPEPKEDEVLLQMAYVGICGSDVHYYEHGRIADFIVKDPMVIGHEASGTVVKVGKNVKHLKK   81 (178)
T ss_dssp             CEEEEEEETTEEEEEECCCCCCCTTEEEEEEEEEEECHHHHHHHHHSBSSSCBCCSCEECCCEEEEEEEEECTTCCSCCT
T ss_pred             ceEEEEEcCCcEEEEEeECCCCCCCEEEEEEEEEcccCchhhhhccCccccccccCCeeeccccceEEEecCcccCCCCC
Confidence            67888899999999999999999999999999999999999999887666666678999999999999999999999999


Q ss_pred             CCEEEEcCCcCCCCCccccCCCCCCCCCccccccCCCCcceeeEEeecCCceEECCCCCCcchhccch-hhHHHHHHHHh
Q 017868           98 GDRVALEPGISCWRCDHCKGGRYNLCPEMKFFATPPVHGSLANQVVHPADLCFKLPDNVSLEEGAMCE-PLSVGLHACRR  176 (365)
Q Consensus        98 Gd~V~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~v~~~~~~~iP~~~~~~~a~~~~-~~~~a~~~~~~  176 (365)
                      ||||+..+..+|+.|++|..++.++|++..+.+....+|+|+||+.+++++++++|+++++++|+.+. ++.|||++++.
T Consensus        82 GdrV~~~~~~~~~~c~~c~~g~~~~c~~~~~~~~~~~~G~~aey~~v~~~~~~~iP~~~~~~~aa~~~~~~~ta~~a~~~  161 (178)
T d1e3ja1          82 GDRVAVEPGVPCRRCQFCKEGKYNLCPDLTFCATPPDDGNLARYYVHAADFCHKLPDNCNVKQLVTHSFKLEQTVDAFEA  161 (178)
T ss_dssp             TCEEEECCEECCSSSHHHHTTCGGGCTTCEETTBTTBCCSCBSEEEEEGGGEEECCTTCCCGGGEEEEEEGGGHHHHHHH
T ss_pred             CCEEEECcccccCCccccccCCccccccccceeccccccccceeeeecccceeeCCCCCCHHHHHHHHhHHHHHHHHHHH
Confidence            99999999999999999999999999999999888889999999999999999999999999999885 88999999999


Q ss_pred             cCCCCCCEEEEEcC
Q 017868          177 ANIGPETNVLIMGA  190 (365)
Q Consensus       177 ~~~~~g~~vlI~G~  190 (365)
                      +++++|++|||+|+
T Consensus       162 ~~~~~g~~VlVig~  175 (178)
T d1e3ja1         162 ARKKADNTIKVMIS  175 (178)
T ss_dssp             HHHCCTTCSEEEEE
T ss_pred             hCCCCCCEEEEEcc
Confidence            99999999999864

>d1pl8a1 b.35.1.2 (A:1-145,A:317-356) Ketose reductase (sorbitol dehydrogenase) {Human (Homo sapiens) [TaxId: 9606]}

class: All beta proteins
fold: GroES-like
superfamily: GroES-like
family: Alcohol dehydrogenase-like, N-terminal domain
domain: Ketose reductase (sorbitol dehydrogenase)
species: Human (Homo sapiens) [TaxId: 9606]

Probab=100.00  E-value=1.2e-36  Score=250.05  Aligned_cols=175  Identities=44%  Similarity=0.759  Sum_probs=160.1

Q ss_pred             hhcceeEEEecCCceEEEEecCCCCCCCcEEEEEeeeeeCcccHhhhhccccCCccCCCCcccCccceEEEEEeCCCCCC
Q 017868           15 EEVNMAAWLLGVNTLKIQPFELPSLGPYDVLVRMKAVGICGSDVHYLKTLRCADFVVKEPMVIGHECAGVIEKVGSEVKT   94 (365)
Q Consensus        15 ~~~~~~~~~~~~~~l~~~~~~~p~~~~~eVlI~v~~~~l~~~D~~~~~g~~~~~~~~~~p~~~G~e~~G~V~~vG~~v~~   94 (365)
                      ++.++++++.++++|+++++|+|+|+++||+|||.+++||++|++.+.+.+.+.....+|.++|||++|+|+++|+++++
T Consensus         5 ~p~~~a~V~~gp~~l~l~evp~P~p~~~eVlVkv~a~gic~sD~~~~~~~~~~~~~~~~p~i~GhE~~G~V~~vG~~v~~   84 (185)
T d1pl8a1           5 KPNNLSLVVHGPGDLRLENYPIPEPGPNEVLLRMHSVGICGSDVHYWEYGRIGNFIVKKPMVLGHEASGTVEKVGSSVKH   84 (185)
T ss_dssp             CCCCEEEEEEETTEEEEEECCCCCCCTTEEEEEEEEEEECHHHHHHHHHSEETTEECSSCEECCCEEEEEEEEECTTCCS
T ss_pred             CCCCEEEEEeCCCeEEEEEeECCCCCCCEEEEEEEEEEeeCchhhhhccccccccCCCCCeeeeeeeeeeEEEeccceee
Confidence            45688999999999999999999999999999999999999999999876655555778999999999999999999999


Q ss_pred             CCCCCEEEEcCCcCCCCCccccCCCCCCCCCccccccCCCCcceeeEEeecCCceEECCCCCCcchhccchhhHHHHHHH
Q 017868           95 LVPGDRVALEPGISCWRCDHCKGGRYNLCPEMKFFATPPVHGSLANQVVHPADLCFKLPDNVSLEEGAMCEPLSVGLHAC  174 (365)
Q Consensus        95 ~~~Gd~V~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~v~~~~~~~iP~~~~~~~a~~~~~~~~a~~~~  174 (365)
                      |++||||++.+..+|++|++|+.+++++|.+..+.+....+|+|+||+++++++++++|+++++++|+.+ ++++|++++
T Consensus        85 ~~~GdrV~~~~~~~cg~c~~c~~G~~~~c~~~~~~g~~~~~G~~aey~~~~~~~~~~lP~~~~~~~aa~~-pl~~a~~a~  163 (185)
T d1pl8a1          85 LKPGDRVAIEPGAPRENDEFCKMGRYNLSPSIFFCATPPDDGNLCRFYKHNAAFCYKLPDNVKPLVTHRF-PLEKALEAF  163 (185)
T ss_dssp             CCTTCEEEECSEECSSCCHHHHTTCGGGCTTCEETTBTTBCCSCBSEEEEEGGGEEECCTTCGGGEEEEE-EGGGHHHHH
T ss_pred             ecccccceecceeccccchhhccchhchhccceeeecccccccceEEEEEchHHEEECCCCCCHHHHHHH-HHHHHHHHH
Confidence            9999999999999999999999999999999999988778899999999999999999999999988754 567788888


Q ss_pred             HhcCCCCCCEEEEEcCC
Q 017868          175 RRANIGPETNVLIMGAG  191 (365)
Q Consensus       175 ~~~~~~~g~~vlI~G~g  191 (365)
                      +..++++|++||| |+|
T Consensus       164 ~~~~~~~G~~VlI-g~G  179 (185)
T d1pl8a1         164 ETFKKGLGLKIML-KCD  179 (185)
T ss_dssp             HHHHTTCCSEEEE-ECC
T ss_pred             HHhCCCCCCEEEE-EeC
Confidence            8888899999998 544

>d1h2ba1 b.35.1.2 (A:17-154,A:327-359) Alcohol dehydrogenase {Archaeon Aeropyrum pernix [TaxId: 56636]}

class: All beta proteins
fold: GroES-like
superfamily: GroES-like
family: Alcohol dehydrogenase-like, N-terminal domain
domain: Alcohol dehydrogenase
species: Archaeon Aeropyrum pernix [TaxId: 56636]

Probab=100.00  E-value=1.8e-34  Score=233.77  Aligned_cols=167  Identities=29%  Similarity=0.503  Sum_probs=150.5

Q ss_pred             eeEEEecCC-ceEEEEecCCCC-CCCcEEEEEeeeeeCcccHhhhhccccCCccCCCCcccCccceEEEEEeCCCCCCCC
Q 017868           19 MAAWLLGVN-TLKIQPFELPSL-GPYDVLVRMKAVGICGSDVHYLKTLRCADFVVKEPMVIGHECAGVIEKVGSEVKTLV   96 (365)
Q Consensus        19 ~~~~~~~~~-~l~~~~~~~p~~-~~~eVlI~v~~~~l~~~D~~~~~g~~~~~~~~~~p~~~G~e~~G~V~~vG~~v~~~~   96 (365)
                      ||+++.+.+ +|+++++++|++ .++||||||.++++|++|++.+.|.........+|.++|||++|+|+++|+++++|+
T Consensus         1 kA~~~~~~g~pl~i~~v~~P~~~~~~eVlVkv~a~gic~sD~~~~~g~~~~~~~~~~P~v~GhE~~G~V~~vG~~v~~~~   80 (171)
T d1h2ba1           1 KAARLHEYNKPLRIEDVDYPRLEGRFDVIVRIAGAGVCHTDLHLVQGMWHELLQPKLPYTLGHENVGYIEEVAEGVEGLE   80 (171)
T ss_dssp             CEEEESSTTSCCEEECCCCCCCBTTBCEEEEEEEEECCHHHHHHHHTTTHHHHCCCSSEECCCCEEEEEEEECTTCCSCC
T ss_pred             CEEEEEeCCCCCEEEEeeCCCCCCCCEEEEEEEecccceeeehccCCCcccccCCccccccceeeeeeeecccCCCCcCC
Confidence            678888754 599999999986 689999999999999999999988654433457799999999999999999999999


Q ss_pred             CCCEEEEcCCcCCCCCccccCCCCCCCCCccccccCCCCcceeeEEeecCCceEECCCCCCcchhccc-hhhHHHHHHHH
Q 017868           97 PGDRVALEPGISCWRCDHCKGGRYNLCPEMKFFATPPVHGSLANQVVHPADLCFKLPDNVSLEEGAMC-EPLSVGLHACR  175 (365)
Q Consensus        97 ~Gd~V~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~v~~~~~~~iP~~~~~~~a~~~-~~~~~a~~~~~  175 (365)
                      +||||++.+..+|++|..|+.+.+++|.+..+.+. ..+|+|+||+++++++++++|++++++.++.+ .++.||+++++
T Consensus        81 ~GdrV~~~~~~~cg~~~~c~~g~~~~c~~~~~~g~-~~~G~~aey~~v~~~~~~~iP~~~~~e~aa~~~~~~~ta~~al~  159 (171)
T d1h2ba1          81 KGDPVILHPAVTDGTCLACRAGEDMHCENLEFPGL-NIDGGFAEFMRTSHRSVIKLPKDVRVEVDIHKLDEINDVLERLE  159 (171)
T ss_dssp             TTCEEEECSCBCCSCSHHHHTTCGGGCTTCBCBTT-TBCCSSBSEEEECGGGEEECCTTCCCCEEEEEGGGHHHHHHHHH
T ss_pred             CCCEEEEcCccCCCCccccccccccccccccccee-ecccccceeeeehhhcceecCCCCCHHHHHHHHhHHHHHHHHHH
Confidence            99999999999999999999999999999888876 46799999999999999999999999877655 58999999998


Q ss_pred             hcCCCCCCEEEE
Q 017868          176 RANIGPETNVLI  187 (365)
Q Consensus       176 ~~~~~~g~~vlI  187 (365)
                      .+++ .|++|||
T Consensus       160 ~~~~-~G~~VlI  170 (171)
T d1h2ba1         160 KGEV-LGRAVLI  170 (171)
T ss_dssp             TTCC-SSEEEEE
T ss_pred             hcCC-CCCEEEe
Confidence            8888 8999998

>d1llua1 b.35.1.2 (A:2-143,A:310-342) Alcohol dehydrogenase {Pseudomonas aeruginosa [TaxId: 287]}

class: All beta proteins
fold: GroES-like
superfamily: GroES-like
family: Alcohol dehydrogenase-like, N-terminal domain
domain: Alcohol dehydrogenase
species: Pseudomonas aeruginosa [TaxId: 287]

Probab=100.00  E-value=1.1e-33  Score=230.74  Aligned_cols=172  Identities=28%  Similarity=0.381  Sum_probs=150.7

Q ss_pred             cchhcceeEEEecCC-ceEEEEecCCCCCCCcEEEEEeeeeeCcccHhhhhccccCCccCCCCcccCccceEEEEEeCCC
Q 017868           13 DGEEVNMAAWLLGVN-TLKIQPFELPSLGPYDVLVRMKAVGICGSDVHYLKTLRCADFVVKEPMVIGHECAGVIEKVGSE   91 (365)
Q Consensus        13 ~~~~~~~~~~~~~~~-~l~~~~~~~p~~~~~eVlI~v~~~~l~~~D~~~~~g~~~~~~~~~~p~~~G~e~~G~V~~vG~~   91 (365)
                      +++.+|||+++.+++ +++++++|.|.|+++||+|||.++++|++|++.+.|.+..  ...+|.++|||++|+|+++|++
T Consensus         1 ~~P~tMkA~v~~~~g~pl~l~evp~P~~~~~evlVkv~a~gic~~D~~~~~G~~~~--~~~~P~i~GhE~~G~V~~~G~~   78 (175)
T d1llua1           1 TLPQTMKAAVVHAYGAPLRIEEVKVPLPGPGQVLVKIEASGVCHTDLHAAEGDWPV--KPPLPFIPGHEGVGYVAAVGSG   78 (175)
T ss_dssp             CCCSEEEEEEBCSTTSCCEEEEEECCCCCTTCEEEEEEEEECCHHHHHHHHTCSSS--CCCSSBCCCSCEEEEEEEECTT
T ss_pred             CcchhcEEEEEEeCCCCCEEEEeECCCCCCCEEEEEEEEecCcccchhhhccCccc--cccCCcCCCCcceEEEEEeCCC
Confidence            367899999999874 5999999999999999999999999999999999986432  2567999999999999999999


Q ss_pred             CCCCCCCCEEEEcC-CcCCCCCccccCCCCCCCCCccccccCCCCcceeeEEeecCCceEECCCCCCcchhccch-hhHH
Q 017868           92 VKTLVPGDRVALEP-GISCWRCDHCKGGRYNLCPEMKFFATPPVHGSLANQVVHPADLCFKLPDNVSLEEGAMCE-PLSV  169 (365)
Q Consensus        92 v~~~~~Gd~V~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~v~~~~~~~iP~~~~~~~a~~~~-~~~~  169 (365)
                      +++|++||||+..+ ...|+.|.+|+.+.+++|.+....+. ..+|+|+||+.+++++++++|++++++.++.+. .+.+
T Consensus        79 v~~~~~GdrV~~~~~~~~~g~~~~~~~g~~~~~~~~~~~G~-~~~gg~aey~~v~~~~~~~iPd~l~~~~a~~~~~~~~t  157 (175)
T d1llua1          79 VTRVKEGDRVGIPWLYTACGCCEHCLTGWETLCESQQNTGY-SVNGGYAEYVLADPNYVGILPKNVKATIHPGKLDDINQ  157 (175)
T ss_dssp             CCSCCTTCEEEECSEEECCSSSHHHHTTCGGGCTTCEEBTT-TBCCSSBSEEEECTTTSEECCTTCCCCEEEECGGGHHH
T ss_pred             ccccccCCEEEeccccccCCccccccCCccccccccccccc-ccccccceEEEechHHEEECCCCCChhHHHHHHhHHHH
Confidence            99999999998754 44699999999999999999888876 477999999999999999999999988777554 7778


Q ss_pred             HHHHHHhcCCCCCCEEEEE
Q 017868          170 GLHACRRANIGPETNVLIM  188 (365)
Q Consensus       170 a~~~~~~~~~~~g~~vlI~  188 (365)
                      +++.++.+.+ +|++|||+
T Consensus       158 ~~~~~~~g~~-~G~~VLVl  175 (175)
T d1llua1         158 ILDQMRAGQI-EGRIVLEM  175 (175)
T ss_dssp             HHHHHHTTCC-SSEEEEEC
T ss_pred             HHHHHHhCCC-CCCEEEeC
Confidence            8877776544 69999984

>d1cdoa1 b.35.1.2 (A:1-164,A:340-374) Alcohol dehydrogenase {Cod (Gadus callarias) [TaxId: 8053]}

class: All beta proteins
fold: GroES-like
superfamily: GroES-like
family: Alcohol dehydrogenase-like, N-terminal domain
domain: Alcohol dehydrogenase
species: Cod (Gadus callarias) [TaxId: 8053]

Probab=100.00  E-value=2.2e-33  Score=233.02  Aligned_cols=172  Identities=23%  Similarity=0.270  Sum_probs=151.1

Q ss_pred             chhcceeEEEecC-CceEEEEecCCCCCCCcEEEEEeeeeeCcccHhhhhccccCCccCCCCcccCccceEEEEEeCCCC
Q 017868           14 GEEVNMAAWLLGV-NTLKIQPFELPSLGPYDVLVRMKAVGICGSDVHYLKTLRCADFVVKEPMVIGHECAGVIEKVGSEV   92 (365)
Q Consensus        14 ~~~~~~~~~~~~~-~~l~~~~~~~p~~~~~eVlI~v~~~~l~~~D~~~~~g~~~~~~~~~~p~~~G~e~~G~V~~vG~~v   92 (365)
                      ..+++||+++.+. .+|+++++++|+|+++||+|||.++|+|++|++.+.|...   ...+|.++|||++|+|+++|+++
T Consensus         5 ~~~~~kAav~~~~~~pl~i~ev~~P~p~~~eVlIkv~a~giCgsD~~~~~g~~~---~~~~p~i~GhE~~G~v~~vG~~v   81 (199)
T d1cdoa1           5 KVIKCKAAVAWEANKPLVIEEIEVDVPHANEIRIKIIATGVCHTDLYHLFEGKH---KDGFPVVLGHEGAGIVESVGPGV   81 (199)
T ss_dssp             SCEEEEEEEBCSTTSCCEEEEEEECCCCTTEEEEEEEEEECCHHHHHHHHTTCC---TTSCSEECCCCEEEEEEEECTTC
T ss_pred             CceEEEEEEEecCCCCcEEEEEECCCCCCCEEEEEEEEEEEecchhhhhhhccc---ccccccccccccceEEEEEcCCC
Confidence            3567889999876 4799999999999999999999999999999999987543   34679999999999999999999


Q ss_pred             CCCCCCCEEEEcCCcCCCCCccccCCCCCCCCCccccccCC--------------------CCcceeeEEeecCCceEEC
Q 017868           93 KTLVPGDRVALEPGISCWRCDHCKGGRYNLCPEMKFFATPP--------------------VHGSLANQVVHPADLCFKL  152 (365)
Q Consensus        93 ~~~~~Gd~V~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~--------------------~~g~~~~~~~v~~~~~~~i  152 (365)
                      ++|++||||++.+..+|++|++|+.+++++|.+........                    ..|+|+||++++++++++|
T Consensus        82 ~~~~~GdrV~~~~~~~cg~c~~C~~g~~~~C~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~~Ggfaey~~v~~~~~~~i  161 (199)
T d1cdoa1          82 TEFQPGEKVIPLFISQCGECRFCQSPKTNQCVKGWANESPDVMSPKETRFTCKGRKVLQFLGTSTFSQYTVVNQIAVAKI  161 (199)
T ss_dssp             CSCCTTCEEEECSSCCCSSSHHHHCTTCCCCSCSGGGTCTTTTSCSCCCEEETTEEEEEGGGTCCSBSEEEEEGGGEEEC
T ss_pred             ceecCCCEEEEeeeccccccccccCCCcccccccccccccccccCcccceeeccceeecccccCCceEEEEEchHHEEEC
Confidence            99999999999999999999999999999998754432211                    1499999999999999999


Q ss_pred             CCCCCcchhccch-hhHHHHHHHH-hcCCCCCCEEEEE
Q 017868          153 PDNVSLEEGAMCE-PLSVGLHACR-RANIGPETNVLIM  188 (365)
Q Consensus       153 P~~~~~~~a~~~~-~~~~a~~~~~-~~~~~~g~~vlI~  188 (365)
                      |+++++++++.+. ++.|++.+++ ....+.|++|||+
T Consensus       162 P~~~~~~~aa~l~~~l~t~~~av~~~~~~~~G~tVlv~  199 (199)
T d1cdoa1         162 DPSVKLDEFITHRMPLESVNDAIDLMKHGKCIRTVLSL  199 (199)
T ss_dssp             CTTSCCGGGEEEEEEGGGHHHHHHHHHTTCCSEEEEEC
T ss_pred             CCCCCHHHHHHHHHHHHHHHHHHHHhCCCCCCCEEEeC
Confidence            9999999988775 8889999996 4678899999984

>d1vj0a1 b.35.1.2 (A:2-155,A:338-367) Hypothetical protein TM0436 {Thermotoga maritima [TaxId: 2336]}

class: All beta proteins
fold: GroES-like
superfamily: GroES-like
family: Alcohol dehydrogenase-like, N-terminal domain
domain: Hypothetical protein TM0436
species: Thermotoga maritima [TaxId: 2336]

Probab=100.00  E-value=1.9e-33  Score=229.02  Aligned_cols=167  Identities=27%  Similarity=0.461  Sum_probs=146.0

Q ss_pred             chhcceeEEEecCC-ceEEEEecCCCCCCCcEEEEEeeeeeCcccHhhhhccccCCccCCCCcccCccceEEEEEeCCCC
Q 017868           14 GEEVNMAAWLLGVN-TLKIQPFELPSLGPYDVLVRMKAVGICGSDVHYLKTLRCADFVVKEPMVIGHECAGVIEKVGSEV   92 (365)
Q Consensus        14 ~~~~~~~~~~~~~~-~l~~~~~~~p~~~~~eVlI~v~~~~l~~~D~~~~~g~~~~~~~~~~p~~~G~e~~G~V~~vG~~v   92 (365)
                      |.+++||+++.+++ +|++++++.|+|+++||||||.++|||++|++++.|.+..   ..+|.++|||++|+|+++|++|
T Consensus         1 m~~k~kA~v~~~~~~pl~i~ev~~P~~~~~evlVkv~a~gIC~sD~~~~~G~~~~---~~~P~vlGHE~~G~V~~vG~~v   77 (184)
T d1vj0a1           1 MGLKAHAMVLEKFNQPLVYKEFEISDIPRGSILVEILSAGVCGSDVHMFRGEDPR---VPLPIILGHEGAGRVVEVNGEK   77 (184)
T ss_dssp             CCEEEEEEEBCSTTSCCEEEEEEECCCCTTCEEEEEEEEEECHHHHHHHTTCCTT---CCSSBCCCCEEEEEEEEESSCC
T ss_pred             CCceEEEEEEecCCCCcEEEEeeCCCCCCCEEEEEEEEECCCCCchhheeccCCc---cccccccceeeeeeeeEEeccc
Confidence            45678999999864 6999999999999999999999999999999999875432   4689999999999999999988


Q ss_pred             C-----CCCCCCEEEEcCCcCCCCCccccCCC-CCCCCCccccccC-------CCCcceeeEEeec-CCceEECCCCCCc
Q 017868           93 K-----TLVPGDRVALEPGISCWRCDHCKGGR-YNLCPEMKFFATP-------PVHGSLANQVVHP-ADLCFKLPDNVSL  158 (365)
Q Consensus        93 ~-----~~~~Gd~V~~~~~~~~~~~~~~~~~~-~~~~~~~~~~~~~-------~~~g~~~~~~~v~-~~~~~~iP~~~~~  158 (365)
                      +     .+++||||+..+..+|++|.+|+.+. +++|++....|..       ..+|+|+||+.++ +++++++|+++++
T Consensus        78 ~~~~~~~~~~Gd~V~~~~~~~Cg~C~~C~~g~~~~~c~~~~~~G~~~~~~~~~~~~Gg~ae~~~v~~~~~v~~ip~~l~~  157 (184)
T d1vj0a1          78 RDLNGELLKPGDLIVWNRGITCGECYWCKVSKEPYLCPNRKVYGINRGCSEYPHLRGCYSSHIVLDPETDVLKVSEKITH  157 (184)
T ss_dssp             BCTTSCBCCTTCEEEECSEECCSSSHHHHTSCCGGGCTTCEETTTTCCSSSTTCCCSSSBSEEEECTTCCEEEECTTCCE
T ss_pred             cccccccccceeeeEeccccccccChhHhCccccccCCCceeeccCCCCCCCCCcceeCcCcEEechhHcEEECCCCCCH
Confidence            6     46899999999999999999999887 5679888777652       3589999999996 6899999999997


Q ss_pred             chhccchhhHHHHHHHHhcCCCCCCEEEEE
Q 017868          159 EEGAMCEPLSVGLHACRRANIGPETNVLIM  188 (365)
Q Consensus       159 ~~a~~~~~~~~a~~~~~~~~~~~g~~vlI~  188 (365)
                      ++     ++++|+++++.+++++|++|||+
T Consensus       158 ~~-----pl~~A~~a~~~~~~~~G~~VlI~  182 (184)
T d1vj0a1         158 RL-----PLKEANKALELMESREALKVILY  182 (184)
T ss_dssp             EE-----EGGGHHHHHHHHHHTSCSCEEEE
T ss_pred             HH-----HHHHHHHHHHHhCCCcCCEEEEe
Confidence            63     45678889998999999999997

>d1f8fa1 b.35.1.2 (A:4-162,A:337-371) Benzyl alcohol dehydrogenase {Acinetobacter calcoaceticus [TaxId: 471]}

class: All beta proteins
fold: GroES-like
superfamily: GroES-like
family: Alcohol dehydrogenase-like, N-terminal domain
domain: Benzyl alcohol dehydrogenase
species: Acinetobacter calcoaceticus [TaxId: 471]

Probab=100.00  E-value=2.5e-33  Score=231.11  Aligned_cols=170  Identities=22%  Similarity=0.326  Sum_probs=144.6

Q ss_pred             hhcceeEEEecC-CceEEEEecCCCCCCCcEEEEEeeeeeCcccHhhhhccccCCccCCCCcccCccceEEEEEeCCCCC
Q 017868           15 EEVNMAAWLLGV-NTLKIQPFELPSLGPYDVLVRMKAVGICGSDVHYLKTLRCADFVVKEPMVIGHECAGVIEKVGSEVK   93 (365)
Q Consensus        15 ~~~~~~~~~~~~-~~l~~~~~~~p~~~~~eVlI~v~~~~l~~~D~~~~~g~~~~~~~~~~p~~~G~e~~G~V~~vG~~v~   93 (365)
                      |++|+|+++.++ ++|+++++|.|+|+++||||||.++++|++|++.+.|.+    ..++|.++|||++|+|+++|++++
T Consensus         1 ~k~~~Aav~~~~g~~l~l~~v~~P~p~~geVlVkv~a~gic~sD~~~~~G~~----~~~~P~i~GHE~~G~V~~vG~~v~   76 (194)
T d1f8fa1           1 LKDIIAAVTPCKGADFELQALKIRQPQGDEVLVKVVATGMCHTDLIVRDQKY----PVPLPAVLGHEGSGIIEAIGPNVT   76 (194)
T ss_dssp             CEEEEEEEBCSTTCCCEEEEEEECCCCTTEEEEEEEEEECCHHHHHHHTTSS----CCCSSBCCCCEEEEEEEEECTTCC
T ss_pred             CceeEEEEEcCCCCCcEEEEeeCCCCCCCEEEEEEEEEEecCchHhhhhhcc----cccCCcccccceEEEeeecCccce
Confidence            457899999876 579999999999999999999999999999999988653    356899999999999999999999


Q ss_pred             CCCCCCEEEEcCCcCCCCCccccCCCCCCCCCccccccC----------------------CCCcceeeEEeecCCceEE
Q 017868           94 TLVPGDRVALEPGISCWRCDHCKGGRYNLCPEMKFFATP----------------------PVHGSLANQVVHPADLCFK  151 (365)
Q Consensus        94 ~~~~Gd~V~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~----------------------~~~g~~~~~~~v~~~~~~~  151 (365)
                      +|++||||+.. ..+|++|.+|+.+++++|++.......                      ...|+|+||+++++.++++
T Consensus        77 ~~~vGDrVv~~-~~~Cg~C~~C~~g~~~~C~~~~~~~~~g~~~dg~~~~~~~~~~~~~~~~~~~g~fae~~~v~~~~~~~  155 (194)
T d1f8fa1          77 ELQVGDHVVLS-YGYCGKCTQCNTGNPAYCSEFFGRNFSGADSEGNHALCTHDQGVVNDHFFAQSSFATYALSRENNTVK  155 (194)
T ss_dssp             SCCTTCEEEEC-CCCCSSSHHHHTTCGGGCTTHHHHSSSSSCSSSCCSBC------CBCCGGGTCCSBSEEEEEGGGEEE
T ss_pred             eEccCceeeee-cccccCChhhhCCCcccccccccceeccccccceeeeecCCceeeccccccccccceeEEEehHHEEE
Confidence            99999999554 558999999999999999864222110                      0237899999999999999


Q ss_pred             CCCCCCcchhccchhhHHHHHHHHhcCCCCCCEEEEEcCCHHHHHHHHHHHHHCCCCeEEEE
Q 017868          152 LPDNVSLEEGAMCEPLSVGLHACRRANIGPETNVLIMGAGPIGLVTMLGAPRAFGAPRIVIV  213 (365)
Q Consensus       152 iP~~~~~~~a~~~~~~~~a~~~~~~~~~~~g~~vlI~G~g~~G~~ai~~l~~~~g~~~vi~v  213 (365)
                      +|++++++++                       +++.|+|++|++++| +++.+|+..+++|
T Consensus       156 ip~~i~~~~~-----------------------~~i~g~g~~g~~aiq-~a~~~g~~~iiaV  193 (194)
T d1f8fa1         156 VTKDFPFDQL-----------------------VKFYAFDEINQAAID-SRKGITLKPIIKI  193 (194)
T ss_dssp             ECTTCCGGGG-----------------------EEEEEGGGHHHHHHH-HHHTSCSEEEEEC
T ss_pred             CCCCCCcccE-----------------------EEEeCcHHHHHHHHH-HHHHcCCCEEEEe
Confidence            9999886543                       445678999999999 9999999887765

>d1e3ia1 b.35.1.2 (A:1-167,A:342-376) Alcohol dehydrogenase {Mouse (Mus musculus), class II [TaxId: 10090]}

class: All beta proteins
fold: GroES-like
superfamily: GroES-like
family: Alcohol dehydrogenase-like, N-terminal domain
domain: Alcohol dehydrogenase
species: Mouse (Mus musculus), class II [TaxId: 10090]

Probab=99.98  E-value=1.3e-32  Score=229.42  Aligned_cols=169  Identities=24%  Similarity=0.345  Sum_probs=146.0

Q ss_pred             chhcceeEEEecCC-ceEEEEecCCCCCCCcEEEEEeeeeeCcccHhhhhccccCCccCCCCcccCccceEEEEEeCCCC
Q 017868           14 GEEVNMAAWLLGVN-TLKIQPFELPSLGPYDVLVRMKAVGICGSDVHYLKTLRCADFVVKEPMVIGHECAGVIEKVGSEV   92 (365)
Q Consensus        14 ~~~~~~~~~~~~~~-~l~~~~~~~p~~~~~eVlI~v~~~~l~~~D~~~~~g~~~~~~~~~~p~~~G~e~~G~V~~vG~~v   92 (365)
                      .++||||+++.+++ +|+++++|.|+|+++||||||.++|||++|++.+.|.+    ...+|.++|||++|+|+++|++|
T Consensus         5 ~~~~~KAaV~~~~g~pl~i~evp~P~p~~geVlVkv~a~gic~sD~~~~~G~~----~~~~P~v~GHE~~G~V~~vG~~V   80 (202)
T d1e3ia1           5 KVIKCKAAIAWKTGSPLCIEEIEVSPPKACEVRIQVIATCVCPTDINATDPKK----KALFPVVLGHECAGIVESVGPGV   80 (202)
T ss_dssp             SCEEEEEEEBCSTTSCCEEEEEEECCCCTTEEEEEEEEEECCHHHHHTTCTTS----CCCSSBCCCCEEEEEEEEECTTC
T ss_pred             CeEEEEEEEEccCCCCCEEEEEECCCCCCCEEEEEEEEEEEeccccceeeeec----ccccccccccccceEEeeecCCc
Confidence            35689999999874 69999999999999999999999999999999988753    34679999999999999999999


Q ss_pred             CCCCCCCEEEEcCCcCCCCCccccCCCCCCCCCccccccC------------------------CCCcceeeEEeecCCc
Q 017868           93 KTLVPGDRVALEPGISCWRCDHCKGGRYNLCPEMKFFATP------------------------PVHGSLANQVVHPADL  148 (365)
Q Consensus        93 ~~~~~Gd~V~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~------------------------~~~g~~~~~~~v~~~~  148 (365)
                      +++++||||++.+...|+.|++|..+++++|.+....+..                        ...|+|+||+++++.+
T Consensus        81 ~~~~~GdrV~~~~~~~c~~c~~c~~g~~~~C~~~~~~~~~~~~~~~~~~~~~~~~~~g~~v~~~~~~G~faey~~v~~~~  160 (202)
T d1e3ia1          81 TNFKPGDKVIPFFAPQCKRCKLCLSPLTNLCGKLRNFKYPTIDQELMEDRTSRFTCKGRSIYHFMGVSSFSQYTVVSEAN  160 (202)
T ss_dssp             CSCCTTCEEEECSSCCCSSSHHHHCTTCCCCTTCCCSSCGGGSSCSCTTSCCSEEETTEEEBCCTTTCCSBSEEEEEGGG
T ss_pred             eeccCCCEEEEEeeccccccccccCCcccccccccccccCccceecccccccccccCceeeecccccCCceEEEEEehhh
Confidence            9999999999999999999999999999999876655431                        1248999999999999


Q ss_pred             eEECCCCCCcchhccch-hhHHHHHHHHhcCCCCCCEEEEE
Q 017868          149 CFKLPDNVSLEEGAMCE-PLSVGLHACRRANIGPETNVLIM  188 (365)
Q Consensus       149 ~~~iP~~~~~~~a~~~~-~~~~a~~~~~~~~~~~g~~vlI~  188 (365)
                      ++++|++++++.++.+. ++.+++++++.  +++|++|.|.
T Consensus       161 l~~lP~~~~~~~~~~~~~~~~~~~~a~~~--~k~G~~V~vi  199 (202)
T d1e3ia1         161 LARVDDEFDLDLLVTHALPFESINDAIDL--MKEGKSIRTI  199 (202)
T ss_dssp             EEECCTTSCGGGGEEEEEEGGGHHHHHHH--HHTTCCSEEE
T ss_pred             EEECCCCCCHHHHHHHHHHHHHHHHHHHh--CCCCCEEEEE
Confidence            99999999998777664 56666766654  4688998775

>d1piwa1 b.35.1.2 (A:1-152,A:321-360) Cinnamyl alcohol dehydrogenase, ADH6 {Baker's yeast (Saccharomyces cerevisiae) [TaxId: 4932]}

class: All beta proteins
fold: GroES-like
superfamily: GroES-like
family: Alcohol dehydrogenase-like, N-terminal domain
domain: Cinnamyl alcohol dehydrogenase, ADH6
species: Baker's yeast (Saccharomyces cerevisiae) [TaxId: 4932]

Probab=99.98  E-value=3e-32  Score=223.81  Aligned_cols=173  Identities=22%  Similarity=0.365  Sum_probs=149.8

Q ss_pred             cchhcceeEEEecC---CceEEEEecCCCCCCCcEEEEEeeeeeCcccHhhhhccccCCccCCCCcccCccceEEEEEeC
Q 017868           13 DGEEVNMAAWLLGV---NTLKIQPFELPSLGPYDVLVRMKAVGICGSDVHYLKTLRCADFVVKEPMVIGHECAGVIEKVG   89 (365)
Q Consensus        13 ~~~~~~~~~~~~~~---~~l~~~~~~~p~~~~~eVlI~v~~~~l~~~D~~~~~g~~~~~~~~~~p~~~G~e~~G~V~~vG   89 (365)
                      .-+.++++..+.++   ..+++.+.+.++++|+||||||.++|||++|++.+.|.+.   ...+|+++|||++|+|+++|
T Consensus         2 ~~P~~~ka~~~~~~~~~~~~~~~~~~p~p~~~~eVlVkv~a~giC~sDl~~~~g~~~---~~~~P~i~GHE~~G~Vv~vG   78 (192)
T d1piwa1           2 SYPEKFEGIAIQSHEDWKNPKKTKYDPKPFYDHDIDIKIEACGVCGSDIHCAAGHWG---NMKMPLVVGHEIVGKVVKLG   78 (192)
T ss_dssp             CTTTCEEEEEECCSSSTTSCEEEEECCCCCCTTEEEEEEEEEEECHHHHHHHTTTTS---CCCSSEECCCCEEEEEEEEC
T ss_pred             CCCceeEEEEEeCCCcCCcceEeeccCCCCCCCeEEEEEeeeCCCcchHHHHcCCCC---CCCCCcCcccccccchhhcc
Confidence            45778999999876   4678888887788999999999999999999999987543   25779999999999999999


Q ss_pred             CCC-CCCCCCCEEEEcCC-cCCCCCccccCCCCCCCCCcccccc------CCCCcceeeEEeecCCceEECCCCCCcchh
Q 017868           90 SEV-KTLVPGDRVALEPG-ISCWRCDHCKGGRYNLCPEMKFFAT------PPVHGSLANQVVHPADLCFKLPDNVSLEEG  161 (365)
Q Consensus        90 ~~v-~~~~~Gd~V~~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~------~~~~g~~~~~~~v~~~~~~~iP~~~~~~~a  161 (365)
                      +++ +.+++||||...+. ..|+.|.+|..+++++|.+....+.      ...+|+|+||+++++++++++|++++++.|
T Consensus        79 ~~v~~~~k~GdrV~~~~~~~~c~~c~~c~~g~~~~C~~~~~~~~~~~~~G~~~~Ggfaey~~v~~~~~~~iP~~l~~e~A  158 (192)
T d1piwa1          79 PKSNSGLKVGQRVGVGAQVFSCLECDRCKNDNEPYCTKFVTTYSQPYEDGYVSQGGYANYVRVHEHFVVPIPENIWVETL  158 (192)
T ss_dssp             TTCCSSCCTTCEEEECSEEECCSCSHHHHTTCGGGCTTCEESSSCBCTTSCBCCCSSBSEEEEEGGGEEECCTTCCEEEE
T ss_pred             cccccccCCCCeeeEeeeccCCCCchhhhcCCcccccccccccccccccccccccceeeEEEeehHHeEECCCCCCHHHH
Confidence            988 56999999977654 4699999999999999998766542      235799999999999999999999999988


Q ss_pred             ccchh-hHHHHHHHHhcCCCCCCEEEEE
Q 017868          162 AMCEP-LSVGLHACRRANIGPETNVLIM  188 (365)
Q Consensus       162 ~~~~~-~~~a~~~~~~~~~~~g~~vlI~  188 (365)
                      +++.+ +.+|+++++++++++|++|||.
T Consensus       159 al~~~~~~ta~~~l~~~~vk~g~~Vvv~  186 (192)
T d1piwa1         159 PVGEAGVHEAFERMEKGDVRYRFTLVGY  186 (192)
T ss_dssp             ESSHHHHHHHHHHHHHTCCSSEEEEECC
T ss_pred             HHHHHHHHHHHHHHHHhCCCCCCEEEEE
Confidence            87764 6789999999999999999985

>d1jvba1 b.35.1.2 (A:1-143,A:314-347) Alcohol dehydrogenase {Archaeon Sulfolobus solfataricus [TaxId: 2287]}

class: All beta proteins
fold: GroES-like
superfamily: GroES-like
family: Alcohol dehydrogenase-like, N-terminal domain
domain: Alcohol dehydrogenase
species: Archaeon Sulfolobus solfataricus [TaxId: 2287]

Probab=99.98  E-value=4.8e-32  Score=221.33  Aligned_cols=168  Identities=29%  Similarity=0.408  Sum_probs=144.3

Q ss_pred             ceeEEEecCC-ceEEEEecCCCCCCCcEEEEEeeeeeCcccHhhhhccccCC-----ccCCCCcccCccceEEEEEeCCC
Q 017868           18 NMAAWLLGVN-TLKIQPFELPSLGPYDVLVRMKAVGICGSDVHYLKTLRCAD-----FVVKEPMVIGHECAGVIEKVGSE   91 (365)
Q Consensus        18 ~~~~~~~~~~-~l~~~~~~~p~~~~~eVlI~v~~~~l~~~D~~~~~g~~~~~-----~~~~~p~~~G~e~~G~V~~vG~~   91 (365)
                      |||+++.+++ +|++++++.|+|++|||+|||.+++||++|++.+.|.+...     ....+|+++|||++|+|+++|++
T Consensus         1 MKA~~~~~~G~pl~i~dv~~P~p~~~eVlVkv~a~gic~~D~~~~~G~~~~~~~~~~~~~~~P~v~GhE~~G~V~~~g~~   80 (177)
T d1jvba1           1 MRAVRLVEIGKPLSLQEIGVPKPKGPQVLIKVEAAGVCHSDVHMRQGRFGNLRIVEDLGVKLPVTLGHEIAGKIEEVGDE   80 (177)
T ss_dssp             CEEEEECSTTSCCEEEECCCCCCCTTCEEEEEEEEEECTHHHHHTTTEETTEETTTTTCCCSCEECCCEEEEEEEEECTT
T ss_pred             CeEEEEEeCCCCCEEEEeeCCCCCCCEEEEEEEEEecccceeeeecCcccccccccccccCCCccccceEEEEEeeeccC
Confidence            7899999864 69999999999999999999999999999999999865321     23468999999999999999999


Q ss_pred             CCCCCCCCEEEEcCCcCCCCCccccCCCCCCCCCccccccCCCCcceeeEEeecCCc-eEECCCCCCcchhccc-hhhHH
Q 017868           92 VKTLVPGDRVALEPGISCWRCDHCKGGRYNLCPEMKFFATPPVHGSLANQVVHPADL-CFKLPDNVSLEEGAMC-EPLSV  169 (365)
Q Consensus        92 v~~~~~Gd~V~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~v~~~~-~~~iP~~~~~~~a~~~-~~~~~  169 (365)
                      +++|++||||++.+...|+.|.+|+.++.++|++..+.+. ..+|+|+||+++++.+ ++++|+..+.+.|+.. .++.+
T Consensus        81 v~~~~~GdrV~~~~~~~c~~c~~~~~g~~~~c~~~~~~g~-~~~G~~aey~~vp~~~~~~~~~~~~~~~~a~~~~~~~~~  159 (177)
T d1jvba1          81 VVGYSKGDLVAVNPWQGEGNCYYCRIGEEHLCDSPRWLGI-NFDGAYAEYVIVPHYKYMYKLRRVKPMITKTMKLEEANE  159 (177)
T ss_dssp             CCSCCTTCEEEECCEECCSSSHHHHTTCGGGCSSCEEBTT-TBCCSSBSEEEESCGGGEEECSSSCCCCEEEEEGGGHHH
T ss_pred             ccccccCceEeeeeccccccccccccccccccCCcceeee-ccccccccEEEEEhHHeEEECCCCChHHHHHHHHHHHHH
Confidence            9999999999999999999999999999999999888876 4679999999998655 5566655554444443 48889


Q ss_pred             HHHHHHhcCCCCCCEEEE
Q 017868          170 GLHACRRANIGPETNVLI  187 (365)
Q Consensus       170 a~~~~~~~~~~~g~~vlI  187 (365)
                      ++++++..++ .|++|||
T Consensus       160 a~~~~~~~~~-~G~~VlI  176 (177)
T d1jvba1         160 AIDNLENFKA-IGRQVLI  176 (177)
T ss_dssp             HHHHHHTTCC-CSEEEEE
T ss_pred             HHHHHHhhcc-cCCceEC
Confidence            9999988876 6899997

>d2fzwa1 b.35.1.2 (A:1-162,A:339-373) Alcohol dehydrogenase {Human (Homo sapiens), different isozymes [TaxId: 9606]}

class: All beta proteins
fold: GroES-like
superfamily: GroES-like
family: Alcohol dehydrogenase-like, N-terminal domain
domain: Alcohol dehydrogenase
species: Human (Homo sapiens), different isozymes [TaxId: 9606]

Probab=99.98  E-value=2.9e-32  Score=225.38  Aligned_cols=172  Identities=20%  Similarity=0.215  Sum_probs=148.3

Q ss_pred             chhcceeEEEecC-CceEEEEecCCCCCCCcEEEEEeeeeeCcccHhhhhccccCCccCCCCcccCccceEEEEEeCCCC
Q 017868           14 GEEVNMAAWLLGV-NTLKIQPFELPSLGPYDVLVRMKAVGICGSDVHYLKTLRCADFVVKEPMVIGHECAGVIEKVGSEV   92 (365)
Q Consensus        14 ~~~~~~~~~~~~~-~~l~~~~~~~p~~~~~eVlI~v~~~~l~~~D~~~~~g~~~~~~~~~~p~~~G~e~~G~V~~vG~~v   92 (365)
                      -+++|||+++.++ ++|+++++|+|+|+++||||||.++|||++|++++.|.+.   ...+|.++|||++|+|+++|++|
T Consensus         3 ~~~~~kAav~~~~g~~l~i~evp~P~p~~~eVLVkv~a~gic~sD~~~~~G~~~---~~~~p~v~GhE~~G~V~~vG~~V   79 (197)
T d2fzwa1           3 EVIKCKAAVAWEAGKPLSIEEIEVAPPKAHEVRIKIIATAVCHTDAYTLSGADP---EGCFPVILGHLGAGIVESVGEGV   79 (197)
T ss_dssp             CCEEEEEEEBCSTTSCCEEEEEEECCCCTTEEEEEEEEEECCHHHHHHHHTCCT---TCCSSBCCCCEEEEEEEEECTTC
T ss_pred             CceEEEEEEEccCCCCCEEEEEECCCCCCCEEEEEEEEecCCCCcHHHHcCCcc---cccccccCCcceeeEEEeecCCc
Confidence            3567999999976 5799999999999999999999999999999999998532   35679999999999999999999


Q ss_pred             CCCCCCCEEEEcCCcCCCCCccccCCCCCCCCCcccccc--------------------CCCCcceeeEEeecCCceEEC
Q 017868           93 KTLVPGDRVALEPGISCWRCDHCKGGRYNLCPEMKFFAT--------------------PPVHGSLANQVVHPADLCFKL  152 (365)
Q Consensus        93 ~~~~~Gd~V~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~--------------------~~~~g~~~~~~~v~~~~~~~i  152 (365)
                      +.+++||||++.+..+|+.|.+|..++++.|++......                    ....|+|+||+++++.+++++
T Consensus        80 ~~~~~GdrV~v~~~~~cg~c~~c~~g~~~~C~~~~~~~~~~~~~~~~~~~~~~g~~v~~~~g~GgfAey~vvp~~~~~~v  159 (197)
T d2fzwa1          80 TKLKAGDTVIPLYIPQCGECKFCLNPKTNLCQKIRVTQGKGLMPDGTSRFTCKGKTILHYMGTSTFSEYTVVADISVAKI  159 (197)
T ss_dssp             CSCCTTCEEEECSSCCCSCSHHHHCTTCCCCCTTHHHHHTTCCTTSCCSEEETTEEEBCCTTTCCSBSEEEEEGGGEEEC
T ss_pred             eecCCCCEEEEccccccccccccccCccccCccccccccccccCCccceeccCCcceecccccccceeEEEechHHEEEC
Confidence            999999999999999999999999999999986543311                    012489999999999999999


Q ss_pred             CCCCCcchhccch-hhHHHHHHHHh-cCCCCCCEEEEE
Q 017868          153 PDNVSLEEGAMCE-PLSVGLHACRR-ANIGPETNVLIM  188 (365)
Q Consensus       153 P~~~~~~~a~~~~-~~~~a~~~~~~-~~~~~g~~vlI~  188 (365)
                      |+++++++++.+. ++.+++.+++. ...+.+++|||+
T Consensus       160 p~~l~~~~aa~~~~~~~t~~~a~~~~~~g~~~~tvvvi  197 (197)
T d2fzwa1         160 DPLIKVDEFVTHNLSFDEINKAFELMHSGKSIRTVVKI  197 (197)
T ss_dssp             CTTSCSGGGEEEEEEGGGHHHHHHHHHHTCCSEEEEEC
T ss_pred             CCCCCHHHHhhhhhHHHHHHHHHHhccCCCcCCEEEeC
Confidence            9999999988775 77788888744 334678898874

>d1rjwa1 b.35.1.2 (A:1-137,A:306-339) Alcohol dehydrogenase {Bacillus stearothermophilus [TaxId: 1422]}

class: All beta proteins
fold: GroES-like
superfamily: GroES-like
family: Alcohol dehydrogenase-like, N-terminal domain
domain: Alcohol dehydrogenase
species: Bacillus stearothermophilus [TaxId: 1422]

Probab=99.97  E-value=6.5e-32  Score=219.46  Aligned_cols=167  Identities=32%  Similarity=0.463  Sum_probs=145.3

Q ss_pred             ceeEEEecC-CceEEEEecCCCCCCCcEEEEEeeeeeCcccHhhhhccccCCccCCCCcccCccceEEEEEeCCCCCCCC
Q 017868           18 NMAAWLLGV-NTLKIQPFELPSLGPYDVLVRMKAVGICGSDVHYLKTLRCADFVVKEPMVIGHECAGVIEKVGSEVKTLV   96 (365)
Q Consensus        18 ~~~~~~~~~-~~l~~~~~~~p~~~~~eVlI~v~~~~l~~~D~~~~~g~~~~~~~~~~p~~~G~e~~G~V~~vG~~v~~~~   96 (365)
                      |||+++.+. ++|+++++|.|+|++|||||||++++||++|++.+.+....  ...+|.++|||++|+|+++|+++++++
T Consensus         1 MkA~v~~~~g~pl~i~~v~~P~~~~~eVlVkv~a~gic~sD~~~~~~~~~~--~~~~p~v~GhE~~G~Vv~vG~~v~~~~   78 (171)
T d1rjwa1           1 MKAAVVEQFKEPLKIKEVEKPTISYGEVLVRIKACGVCHTDLHAAHGDWPV--KPKLPLIPGHEGVGIVEEVGPGVTHLK   78 (171)
T ss_dssp             CEEEEBSSTTSCCEEEECCCCCCCTTEEEEEEEEEEECHHHHHHHHTCSSS--CCCSSBCCCSCEEEEEEEECTTCCSCC
T ss_pred             CeEEEEecCCCCcEEEEeECCCCCCCeEEEEEEEeeccccceeeeeccccc--ccccccccCCEEEEEEEEecccccCce
Confidence            789999975 46999999999999999999999999999999988764332  257799999999999999999999999


Q ss_pred             CCCEEEEcC-CcCCCCCccccCCCCCCCCCccccccCCCCcceeeEEeecCCceEECCCCCCcchhccchhhHHHHHHHH
Q 017868           97 PGDRVALEP-GISCWRCDHCKGGRYNLCPEMKFFATPPVHGSLANQVVHPADLCFKLPDNVSLEEGAMCEPLSVGLHACR  175 (365)
Q Consensus        97 ~Gd~V~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~v~~~~~~~iP~~~~~~~a~~~~~~~~a~~~~~  175 (365)
                      +||||+..+ ...|+.|..|..+..++|......+. ..+|+|+||+++++++++++|++++++.|+ +.++.++++++.
T Consensus        79 vGdrV~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~-~~~G~~aey~~v~~~~~~~iP~~~~~e~A~-l~~~~~~~~~~~  156 (171)
T d1rjwa1          79 VGDRVGIPWLYSACGHCDYCLSGQETLCEHQKNAGY-SVDGGYAEYCRAAADYVVKIPDNTIIEVQP-LEKINEVFDRML  156 (171)
T ss_dssp             TTCEEEECSEEECCSCSHHHHTTCGGGCTTCEEBTT-TBCCSSBSEEEEEGGGCEECCTTCCEEEEE-GGGHHHHHHHHH
T ss_pred             eeeEEeeccccccccccccccCCCccccccccccce-eccCccccceEecHHHEEECCCCCCHHHHH-HHHHHHHHHHHH
Confidence            999998754 45588899999999999999888776 467999999999999999999999987665 467778888877


Q ss_pred             hcCCCCCCEEEEEc
Q 017868          176 RANIGPETNVLIMG  189 (365)
Q Consensus       176 ~~~~~~g~~vlI~G  189 (365)
                      .+.+ +|++|||+|
T Consensus       157 ~~~~-~G~tVlViG  169 (171)
T d1rjwa1         157 KGQI-NGRVVLTLE  169 (171)
T ss_dssp             TTCC-SSEEEEECC
T ss_pred             hcCC-CCCEEEEeC
Confidence            6666 599999987

>d1kola1 b.35.1.2 (A:2-160,A:356-397) Formaldehyde dehydrogenase {Pseudomonas putida [TaxId: 303]}

class: All beta proteins
fold: GroES-like
superfamily: GroES-like
family: Alcohol dehydrogenase-like, N-terminal domain
domain: Formaldehyde dehydrogenase
species: Pseudomonas putida [TaxId: 303]

Probab=99.97  E-value=2.9e-34  Score=237.63  Aligned_cols=181  Identities=25%  Similarity=0.375  Sum_probs=148.5

Q ss_pred             ceeEEEecCCceEEEEecCCCC-------CCCcEEEEEeeeeeCcccHhhhhccccCCccCCCCcccCccceEEEEEeCC
Q 017868           18 NMAAWLLGVNTLKIQPFELPSL-------GPYDVLVRMKAVGICGSDVHYLKTLRCADFVVKEPMVIGHECAGVIEKVGS   90 (365)
Q Consensus        18 ~~~~~~~~~~~l~~~~~~~p~~-------~~~eVlI~v~~~~l~~~D~~~~~g~~~~~~~~~~p~~~G~e~~G~V~~vG~   90 (365)
                      +||+++.++++++++++|.|++       .++||+|||.+++||++|++.+.|..    ...+|.++|||++|+|+++|+
T Consensus         2 ~kA~v~~~~~~le~~e~~~P~~~~p~~~p~~~eVlVkv~a~giC~sDl~~~~G~~----~~~~P~v~GHE~~G~Vv~vG~   77 (201)
T d1kola1           2 NRGVVYLGSGKVEVQKIDYPKMQDPRGKKIEHGVILKVVSTNICGSDQHMVRGRT----TAQVGLVLGHEITGEVIEKGR   77 (201)
T ss_dssp             EEEEEEEETTEEEEEEECCCCSBCTTSCBCSSCEEEEEEEEECCHHHHHHHTTCS----CCCTTCBCCCCEEEEEEEECT
T ss_pred             cEEEEEeCCCceEEEEecCCcccCCCCCCCCCEEEEEEEEEEEcchhhhhhcCCc----ccccceeccceeeeeeecccc
Confidence            6899999999999999999975       46999999999999999999988643    356799999999999999999


Q ss_pred             CCCCCCCCCEEEEcCCcCCCCCccccCCCCCCCCCcccc------cc---CCCCcceeeEEeecC--CceEECCCCCCcc
Q 017868           91 EVKTLVPGDRVALEPGISCWRCDHCKGGRYNLCPEMKFF------AT---PPVHGSLANQVVHPA--DLCFKLPDNVSLE  159 (365)
Q Consensus        91 ~v~~~~~Gd~V~~~~~~~~~~~~~~~~~~~~~~~~~~~~------~~---~~~~g~~~~~~~v~~--~~~~~iP~~~~~~  159 (365)
                      +|++|++||||++.+..+|++|++|+.++++.|......      +.   ...+|+|+||+++|.  .++++||++.++.
T Consensus        78 ~V~~~~vGdrV~v~~~~~Cg~C~~C~~g~~~~~~~~~~~~~~~~~g~~~~~~~~Gg~aeyv~vp~~~~~l~~iPd~~~~~  157 (201)
T d1kola1          78 DVENLQIGDLVSVPFNVACGRCRSCKEMHTGVCLTVNPARAGGAYGYVDMGDWTGGQAEYVLVPYADFNLLKLPDRDKAM  157 (201)
T ss_dssp             TCCSCCTTCEEECCSEECCSSSHHHHTTCGGGCSSSCSSSSCEEBTCTTSCCBCCCSBSEEEESSHHHHCEECSCHHHHH
T ss_pred             ccccccccceeEEeeeeeccCChhhhCCCcccccccccccccccccccCCCccccccccEEEeehHHCeEEECCCCCChH
Confidence            999999999999999999999999999998888653221      11   245799999999985  4799999986555


Q ss_pred             hhcc-chhhHHHHHHHHhcCCCCCCEEEEEcCCHHHHHHHHHHHHHCCC
Q 017868          160 EGAM-CEPLSVGLHACRRANIGPETNVLIMGAGPIGLVTMLGAPRAFGA  207 (365)
Q Consensus       160 ~a~~-~~~~~~a~~~~~~~~~~~g~~vlI~G~g~~G~~ai~~l~~~~g~  207 (365)
                      +++. ..++.++++++.....+.+    ++|+|++|++++| +||.+|+
T Consensus       158 ~~~~~~~~~~~~~~a~~~~~~~~g----~~g~G~vG~~~i~-~ak~~GA  201 (201)
T d1kola1         158 EKINIAEVVGVQVISLDDAPRGYG----EFDAGVPKKFVID-PHKTFSA  201 (201)
T ss_dssp             HTCCHHHHHTEEEECGGGHHHHHH----HHHHTCSCEEEEC-TTCSSCC
T ss_pred             HHHHHHHHHHHHHHHHHhCCCCCe----EEeeCHHHHHHHH-HHHHcCC
Confidence            5544 4577777777654443434    2488999999999 9888875

>d1p0fa1 b.35.1.2 (A:1001-1163,A:1338-1372) Alcohol dehydrogenase {Frog (Rana perezi) [TaxId: 8403]}

class: All beta proteins
fold: GroES-like
superfamily: GroES-like
family: Alcohol dehydrogenase-like, N-terminal domain
domain: Alcohol dehydrogenase
species: Frog (Rana perezi) [TaxId: 8403]

Probab=99.97  E-value=1.1e-31  Score=222.09  Aligned_cols=168  Identities=24%  Similarity=0.370  Sum_probs=140.6

Q ss_pred             hhcceeEEEecC-CceEEEEecCCCCCCCcEEEEEeeeeeCcccHhhhhccccCCccCCCCcccCccceEEEEEeCCCCC
Q 017868           15 EEVNMAAWLLGV-NTLKIQPFELPSLGPYDVLVRMKAVGICGSDVHYLKTLRCADFVVKEPMVIGHECAGVIEKVGSEVK   93 (365)
Q Consensus        15 ~~~~~~~~~~~~-~~l~~~~~~~p~~~~~eVlI~v~~~~l~~~D~~~~~g~~~~~~~~~~p~~~G~e~~G~V~~vG~~v~   93 (365)
                      ..||||+++.++ ++|+++++|+|+|+++||||||.++++|.+|++.+.|..    ...+|.++|||++|+|+++|++++
T Consensus         6 ~~~~KAav~~~~g~~l~i~ev~~P~p~~~eVlVkv~a~gICgsDlh~~~G~~----~~~~P~i~GHE~~G~Vv~~G~~v~   81 (198)
T d1p0fa1           6 DITCKAAVAWEPHKPLSLETITVAPPKAHEVRIKILASGICGSDSSVLKEII----PSKFPVILGHEAVGVVESIGAGVT   81 (198)
T ss_dssp             CEEEEEEEBSSTTSCCEEEEEEECCCCTTEEEEEEEEEECCHHHHHHHTTSS----CCCSSBCCCCCEEEEEEEECTTCC
T ss_pred             ceEEEEEEEccCCCCCEEEEEECCCCCCCEEEEEEEEEEEecccceeeeecc----ccccccccceeeeeeeeecCcccc
Confidence            468999999987 579999999999999999999999999999999998753    357899999999999999999999


Q ss_pred             CCCCCCEEEEcCCcCCCCCccccCCCCCCCCCccccccC--------------------CCCcceeeEEeecCCceEECC
Q 017868           94 TLVPGDRVALEPGISCWRCDHCKGGRYNLCPEMKFFATP--------------------PVHGSLANQVVHPADLCFKLP  153 (365)
Q Consensus        94 ~~~~Gd~V~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~--------------------~~~g~~~~~~~v~~~~~~~iP  153 (365)
                      ++++||||++.+..+|+.|.+|..+.+++|++....+..                    ...|+|+||+.+++..++++|
T Consensus        82 ~~~~GdrV~~~~~~~Cg~c~~c~~g~~~~C~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~g~faey~~v~~~~~~kip  161 (198)
T d1p0fa1          82 CVKPGDKVIPLFVPQCGSCRACKSSNSNFCEKNDMGAKTGLMADMTSRFTCRGKPIYNLMGTSTFTEYTVVADIAVAKID  161 (198)
T ss_dssp             SCCTTCEEEECSSCCCSSSHHHHCTTCCCCTTCSTTTCCCSCTTSCCSEEETTEEEBCSTTTCCSBSEEEEETTSEEEEC
T ss_pred             cCcCCCEEEEEeeccccccccccccccccchhhhccccccccCCCceeEeeCCeeccccCCCccceeeEEecHHHEEECC
Confidence            999999999999999999999999999999876654331                    124889999999999999999


Q ss_pred             CCCCcchhccch-hhHHHHHHHHhcCCCCCCEEEEEcCCHHHH
Q 017868          154 DNVSLEEGAMCE-PLSVGLHACRRANIGPETNVLIMGAGPIGL  195 (365)
Q Consensus       154 ~~~~~~~a~~~~-~~~~a~~~~~~~~~~~g~~vlI~G~g~~G~  195 (365)
                      ++++.+.++... .+         ..+.+++.|||.|+|++|+
T Consensus       162 ~~~~~~~~~~~~~~~---------~~v~~~~~vlv~G~G~iGl  195 (198)
T d1p0fa1         162 PKINVNFLVSTKLTL---------DQINKAFELLSSGQGVRSI  195 (198)
T ss_dssp             TTSCGGGGEEEEECG---------GGHHHHHHHTTTSSCSEEE
T ss_pred             CCCCHHHHHHhhcch---------hhcCCCCEEEEECCCcceE
Confidence            999877655332 21         1223344577777777664

>d1jqba1 b.35.1.2 (A:1001-1139,A:1314-1351) Bacterial secondary alcohol dehydrogenase {Clostridium beijerinckii [TaxId: 1520]}

class: All beta proteins
fold: GroES-like
superfamily: GroES-like
family: Alcohol dehydrogenase-like, N-terminal domain
domain: Bacterial secondary alcohol dehydrogenase
species: Clostridium beijerinckii [TaxId: 1520]

Probab=99.97  E-value=1.4e-30  Score=210.96  Aligned_cols=144  Identities=29%  Similarity=0.345  Sum_probs=127.4

Q ss_pred             ceeEEEecCCceEEEEecCCCCCCCcEEEEEeeeeeCcccHhhhhccccCCccCCCCcccCccceEEEEEeCCCCCCCCC
Q 017868           18 NMAAWLLGVNTLKIQPFELPSLGPYDVLVRMKAVGICGSDVHYLKTLRCADFVVKEPMVIGHECAGVIEKVGSEVKTLVP   97 (365)
Q Consensus        18 ~~~~~~~~~~~l~~~~~~~p~~~~~eVlI~v~~~~l~~~D~~~~~g~~~~~~~~~~p~~~G~e~~G~V~~vG~~v~~~~~   97 (365)
                      ||++++.+++++++.++|.|+|+++||+|||.+++||++|++.+.+..   ....+|.++|||++|+|+++|+++++|++
T Consensus         1 MKa~v~~~~~~l~i~e~p~P~~~~~eVlIkv~a~gic~sD~~~~~~~~---~~~~~P~i~GhE~~G~V~~vG~~v~~~~v   77 (177)
T d1jqba1           1 MKGFAMLGINKLGWIEKERPVAGSYDAIVRPLAVSPCTSDIHTVFEGA---LGDRKNMILGHEAVGEVVEVGSEVKDFKP   77 (177)
T ss_dssp             CEEEEEEETTEEEEEECCCCCCCTTCEEEEEEEECCCHHHHHHHHHCT---TCCCSSEECCCCEEEEEEEECTTCCSCCT
T ss_pred             CeEEEEEeCCCeEEEEeeCCCCCCCEEEEEEEEEecCCCcccccccCC---CCCCCCccCcceeeEEeeecccccceecC
Confidence            799999999999999999999999999999999999999998776533   23467999999999999999999999999


Q ss_pred             CCEEEEcCCcCCCCCccccCCCCCCCCCcccc--ccCCCCcceeeEEeecC--CceEECCCCCCcchhccc
Q 017868           98 GDRVALEPGISCWRCDHCKGGRYNLCPEMKFF--ATPPVHGSLANQVVHPA--DLCFKLPDNVSLEEGAMC  164 (365)
Q Consensus        98 Gd~V~~~~~~~~~~~~~~~~~~~~~~~~~~~~--~~~~~~g~~~~~~~v~~--~~~~~iP~~~~~~~a~~~  164 (365)
                      ||||++.+..+|++|++|+.+..+.|......  .....+|+|+||++++.  .+++++|+++++++++..
T Consensus        78 GdrV~v~~~~~cg~c~~C~~g~~~~c~~~~~~~~~g~~~~G~~aEy~~vp~a~~~l~~iP~~~~~~~~~~~  148 (177)
T d1jqba1          78 GDRVIVPCTTPDWRSLEVQAGFQQHSNGMLAGWKFSNFKDGVFGEYFHVNDADMNLAILPKDVDLSKLVTH  148 (177)
T ss_dssp             TCEEEECSCCCCSSSHHHHTTCGGGTTSTTTTCCBTTTBCCSSBSSEEESSHHHHCEECCTTSCGGGGEEE
T ss_pred             CCcEEEeeeeccccccchhhhhhcccccccccccccCCCChhcCeeEEEEhhhCeEEECCCCcchHHHHHH
Confidence            99999999999999999999999999876432  22346799999999986  479999999998877644

>d1uufa1 b.35.1.2 (A:3-144,A:313-349) Hypothetical protein YahK {Escherichia coli [TaxId: 562]}

class: All beta proteins
fold: GroES-like
superfamily: GroES-like
family: Alcohol dehydrogenase-like, N-terminal domain
domain: Hypothetical protein YahK
species: Escherichia coli [TaxId: 562]

Probab=99.97  E-value=3e-30  Score=209.54  Aligned_cols=158  Identities=23%  Similarity=0.357  Sum_probs=133.3

Q ss_pred             ceeEEEecC-CceEEEEecCCCCCCCcEEEEEeeeeeCcccHhhhhccccCCccCCCCcccCccceEEEEEeCCCCCCCC
Q 017868           18 NMAAWLLGV-NTLKIQPFELPSLGPYDVLVRMKAVGICGSDVHYLKTLRCADFVVKEPMVIGHECAGVIEKVGSEVKTLV   96 (365)
Q Consensus        18 ~~~~~~~~~-~~l~~~~~~~p~~~~~eVlI~v~~~~l~~~D~~~~~g~~~~~~~~~~p~~~G~e~~G~V~~vG~~v~~~~   96 (365)
                      |||+...++ ++|++.++|.|+|++|||||||.+++||++|++.+.|....   ..+|.++|||++|+|+++|++|++++
T Consensus         1 m~a~~~~~~~~pl~i~ev~~P~pg~geVlVkv~a~gic~sDl~~~~g~~~~---~~~P~i~GhE~~G~V~~vG~~V~~~~   77 (179)
T d1uufa1           1 IKAVGAYSAKQPLEPMDITRREPGPNDVKIEIAYCGVCHSDLHQVRSEWAG---TVYPCVPGHEIVGRVVAVGDQVEKYA   77 (179)
T ss_dssp             CEEEEBSSTTSCCEEEECCCCCCCTTEEEEEEEEEECCHHHHHHHHCTTSC---CCSSBCCCCCEEEEEEEECTTCCSCC
T ss_pred             CeEEEEccCCCCCEEEEecCCCCCCCEEEEEEEEECCCCCcceeeeeeecc---ccccccccccccccchhhccccccCC
Confidence            678887765 68999999999999999999999999999999999875432   47799999999999999999999999


Q ss_pred             CCCEEEEcC-CcCCCCCccccCCCCCCCCCcccccc-------CCCCcceeeEEeecCCceEECCCCCCcchhccchhhH
Q 017868           97 PGDRVALEP-GISCWRCDHCKGGRYNLCPEMKFFAT-------PPVHGSLANQVVHPADLCFKLPDNVSLEEGAMCEPLS  168 (365)
Q Consensus        97 ~Gd~V~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~-------~~~~g~~~~~~~v~~~~~~~iP~~~~~~~a~~~~~~~  168 (365)
                      +||||...+ ..+|++|++|+.+.+++|++....+.       ...+|+|+||+++++++++++|+...  .++.+.++.
T Consensus        78 vGdrV~v~~~~~~cg~C~~C~~g~~~~C~~~~~~~~~~~~~~~~~~~GgfaEy~~v~~~~~~~ip~~~~--~~~~a~~l~  155 (179)
T d1uufa1          78 PGDLVGVGCIVDSCKHCEECEDGLENYCDHMTGTYNSPTPDEPGHTLGGYSQQIVVHERYVLRIRVADI--EMIRADQIN  155 (179)
T ss_dssp             TTCEEEECSEEECCSSSHHHHTTCGGGCTTCEETTTSBCSSTTSBCCCSSBSEEEEEGGGCEECCCCCE--EEECGGGHH
T ss_pred             CCCEEEEcccccccCccccccCcccccCCCccccccccCCCCCcccccccceEEEechHHEEECCCCCc--ChhHhchhH
Confidence            999997765 45899999999999999997653322       13469999999999999999996543  344456788


Q ss_pred             HHHHHHHhcCCC
Q 017868          169 VGLHACRRANIG  180 (365)
Q Consensus       169 ~a~~~~~~~~~~  180 (365)
                      ++++++.++.++
T Consensus       156 ~a~~a~~~a~v~  167 (179)
T d1uufa1         156 EAYERMLRGDVK  167 (179)
T ss_dssp             HHHHHHHTTCSS
T ss_pred             HHHHHHHHhCcc
Confidence            899998777655

>d2jhfa1 b.35.1.2 (A:1-163,A:340-374) Alcohol dehydrogenase {Horse (Equus caballus) [TaxId: 9796]}

class: All beta proteins
fold: GroES-like
superfamily: GroES-like
family: Alcohol dehydrogenase-like, N-terminal domain
domain: Alcohol dehydrogenase
species: Horse (Equus caballus) [TaxId: 9796]

Probab=99.96  E-value=1.4e-29  Score=210.09  Aligned_cols=169  Identities=23%  Similarity=0.297  Sum_probs=140.6

Q ss_pred             chhcceeEEEecC-CceEEEEecCCCCCCCcEEEEEeeeeeCcccHhhhhccccCCccCCCCcccCccceEEEEEeCCCC
Q 017868           14 GEEVNMAAWLLGV-NTLKIQPFELPSLGPYDVLVRMKAVGICGSDVHYLKTLRCADFVVKEPMVIGHECAGVIEKVGSEV   92 (365)
Q Consensus        14 ~~~~~~~~~~~~~-~~l~~~~~~~p~~~~~eVlI~v~~~~l~~~D~~~~~g~~~~~~~~~~p~~~G~e~~G~V~~vG~~v   92 (365)
                      ...+|||+++..+ ++|+++++|+|+|+++||||||.++|||.+|++.+.|..    ...+|.++|||++|+|+++|+++
T Consensus         5 ~~~k~KAavl~~~~~~l~i~ev~~P~p~~~eVlVkV~a~giC~sDl~~~~G~~----~~~~P~i~GHE~~G~Vv~vG~~v   80 (198)
T d2jhfa1           5 KVIKCKAAVLWEEKKPFSIEEVEVAPPKAHEVRIKMVATGICRSDDHVVSGTL----VTPLPVIAGHEAAGIVESIGEGV   80 (198)
T ss_dssp             SCEEEEEEEBCSTTSCCEEEEEEECCCCTTEEEEEEEEEECCHHHHHHHHTSS----CCCSSBCCCCSEEEEEEEECTTC
T ss_pred             CceEEEEEEEecCCCCCEEEEEECCCCCCCEEEEEEEEEecccccceeecCCc----ccccceecccceeEEEEecCccc
Confidence            4567999999865 579999999999999999999999999999999998743    35679999999999999999999


Q ss_pred             CCCCCCCEEEEcCCcCCCCCccccCCCCCCCCCcccccc--------------------CCCCcceeeEEeecCCceEEC
Q 017868           93 KTLVPGDRVALEPGISCWRCDHCKGGRYNLCPEMKFFAT--------------------PPVHGSLANQVVHPADLCFKL  152 (365)
Q Consensus        93 ~~~~~Gd~V~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~--------------------~~~~g~~~~~~~v~~~~~~~i  152 (365)
                      +++++||||++.+..+|+.|.+|+.+.+++|........                    ....|+|+||+++++.+++++
T Consensus        81 ~~~~vGdrV~v~~~~~c~~c~~c~~g~~~~C~~~~~~~~~g~~~~~~~~~~~~g~~~~~~~~~G~fAEy~~v~~~~~~~~  160 (198)
T d2jhfa1          81 TTVRPGDKVIPLFTPQCGKCRVCKHPEGNFCLKNDLSMPRGTMQDGTSRFTCRGKPIHHFLGTSTFSQYTVVDEISVAKI  160 (198)
T ss_dssp             CSCCTTCEEEECSSCCCSCSHHHHSTTCCCCTTCSSSSCCCSCTTSCCSEEETTEEEBCSTTTCCSBSEEEEEGGGEEEC
T ss_pred             cCcCCCCEEEEeeeecccccccccCCccceeccccccccCccccCccccccccCceeccCCCCCcccCeEEeCHHHeEEC
Confidence            999999999999999999999999999999987765422                    012489999999999999999


Q ss_pred             CCCCCcchhccch-hhHHHHHHHHhcCCCCCCEEEEE
Q 017868          153 PDNVSLEEGAMCE-PLSVGLHACRRANIGPETNVLIM  188 (365)
Q Consensus       153 P~~~~~~~a~~~~-~~~~a~~~~~~~~~~~g~~vlI~  188 (365)
                      |+.++++.++... ++.....+.  ..+++|++|+|.
T Consensus       161 p~~~~~e~l~~~~~~~~~v~~g~--~~l~~G~~VaVi  195 (198)
T d2jhfa1         161 DAAFALDPLITHVLPFEKINEGF--DLLRSGESIRTI  195 (198)
T ss_dssp             CTTSCCGGGEEEEEEGGGHHHHH--HHHHTTCCSEEE
T ss_pred             CCCCCHHHHHHHHHHHHhhhhCC--ceeeCCCEEEEE
Confidence            9999887655442 333322222  235788998775

>d1yb5a1 b.35.1.2 (A:6-120,A:295-329) Quinone oxidoreductase {Human (Homo sapiens) [TaxId: 9606]}

class: All beta proteins
fold: GroES-like
superfamily: GroES-like
family: Alcohol dehydrogenase-like, N-terminal domain
domain: Quinone oxidoreductase
species: Human (Homo sapiens) [TaxId: 9606]

Probab=99.96  E-value=9.2e-29  Score=195.35  Aligned_cols=143  Identities=21%  Similarity=0.306  Sum_probs=124.5

Q ss_pred             cceeEEEe---cCCceEEE-EecCCCCCCCcEEEEEeeeeeCcccHhhhhccccCCccCCCCcccCccceEEEEEeCCCC
Q 017868           17 VNMAAWLL---GVNTLKIQ-PFELPSLGPYDVLVRMKAVGICGSDVHYLKTLRCADFVVKEPMVIGHECAGVIEKVGSEV   92 (365)
Q Consensus        17 ~~~~~~~~---~~~~l~~~-~~~~p~~~~~eVlI~v~~~~l~~~D~~~~~g~~~~~~~~~~p~~~G~e~~G~V~~vG~~v   92 (365)
                      .|||+++.   +++.+++. ++|.|+|++|||+|||.++++|++|++.+.|.+..  ...+|.++|||++|+|+++|+++
T Consensus         2 ~MkAv~~~~~G~p~~l~~~~~~~~P~~~~~eVlVkv~a~~i~~~D~~~~~g~~~~--~~~~p~i~G~e~~G~V~~vG~~v   79 (150)
T d1yb5a1           2 LMRAVRVFEFGGPEVLKLRSDIAVPIPKDHQVLIKVHACGVNPVETYIRSGTYSR--KPLLPYTPGSDVAGVIEAVGDNA   79 (150)
T ss_dssp             EEEEEEESSCSSGGGEEEEEEEECCCCCTTEEEEEEEEEECCHHHHHHHHTCSSC--CCCSSBCCCSCEEEEEEEECTTC
T ss_pred             ceeEEEEEccCCcceEEEEeecCCCCCCCCeEEEEEEEecCcccchhhhcCCcCc--cccccccCccceeeeeEeeccee
Confidence            47888888   45678885 79999999999999999999999999999876433  24678999999999999999999


Q ss_pred             CCCCCCCEEEEcCCcCCCCCccccCCCCCCCCCccccccCCCCcceeeEEeecCCceEECCCCCCcchhccch-hhHHHH
Q 017868           93 KTLVPGDRVALEPGISCWRCDHCKGGRYNLCPEMKFFATPPVHGSLANQVVHPADLCFKLPDNVSLEEGAMCE-PLSVGL  171 (365)
Q Consensus        93 ~~~~~Gd~V~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~v~~~~~~~iP~~~~~~~a~~~~-~~~~a~  171 (365)
                      ++|++||||++...                           .+|+|+||+++++++++++|+++++++|+.++ ...||+
T Consensus        80 ~~~~vGdrV~~~~~---------------------------~~G~~ae~~~v~~~~~~~iP~~ls~~~Aa~~~~~~~ta~  132 (150)
T d1yb5a1          80 SAFKKGDRVFTSST---------------------------ISGGYAEYALAADHTVYKLPEKLKPVIGSQYPLEKVAEA  132 (150)
T ss_dssp             TTCCTTCEEEESCC---------------------------SSCSSBSEEEEEGGGEEECCTTCCCCEEEEEEGGGHHHH
T ss_pred             eccccCcccccccc---------------------------ccccccccccccccccccccCCCCHHHHHHhhhhhhheh
Confidence            99999999987532                           45999999999999999999999999999887 677888


Q ss_pred             HHH-HhcCCCCCCEEEEE
Q 017868          172 HAC-RRANIGPETNVLIM  188 (365)
Q Consensus       172 ~~~-~~~~~~~g~~vlI~  188 (365)
                      +++ ..+..+.|+++||+
T Consensus       133 ~~~~~~g~~~~G~~vliL  150 (150)
T d1yb5a1         133 HENIIHGSGATGKMILLL  150 (150)
T ss_dssp             HHHHHHSSCCSSEEEEEC
T ss_pred             hhheEEcCcccCCEEEEC
Confidence            876 56788999999874

>d1pl8a2 c.2.1.1 (A:146-316) Ketose reductase (sorbitol dehydrogenase) {Human (Homo sapiens) [TaxId: 9606]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Alcohol dehydrogenase-like, C-terminal domain
domain: Ketose reductase (sorbitol dehydrogenase)
species: Human (Homo sapiens) [TaxId: 9606]

Probab=99.96  E-value=1.1e-27  Score=194.40  Aligned_cols=170  Identities=46%  Similarity=0.820  Sum_probs=154.7

Q ss_pred             CCcchhccchhhHHHHHHHHhcCCCCCCEEEEEcCCHHHHHHHHHHHHHCCCCeEEEEeCChhHHHHHHHcCCCEEEeCC
Q 017868          156 VSLEEGAMCEPLSVGLHACRRANIGPETNVLIMGAGPIGLVTMLGAPRAFGAPRIVIVDVDDYRLSVAKEIGADNIVKVS  235 (365)
Q Consensus       156 ~~~~~a~~~~~~~~a~~~~~~~~~~~g~~vlI~G~g~~G~~ai~~l~~~~g~~~vi~v~~~~~~~~~~~~~g~~~~~~~~  235 (365)
                      +|+++|+++.|+++||++++++++++|++|+|+|+|++|++++| +++.+|+++|++++++++|+++++++|++++++..
T Consensus         1 vS~e~Aal~epla~a~~a~~~~~~~~gd~VlI~G~G~iG~~~~~-~a~~~G~~~Vi~~d~~~~rl~~a~~~Ga~~~~~~~   79 (171)
T d1pl8a2           1 VTFEEGALIEPLSVGIHACRRGGVTLGHKVLVCGAGPIGMVTLL-VAKAMGAAQVVVTDLSATRLSKAKEIGADLVLQIS   79 (171)
T ss_dssp             SCHHHHHHHHHHHHHHHHHHHHTCCTTCEEEEECCSHHHHHHHH-HHHHTTCSEEEEEESCHHHHHHHHHTTCSEEEECS
T ss_pred             CCHHHHHHHHHHHHHHHHHHHhCCCCCCEEEEECCCccHHHHHH-HHHHcCCceEEeccCCHHHHHHHHHhCCccccccc
Confidence            57899999999999999999999999999999999999999999 88999998999999999999999999999998854


Q ss_pred             CCcccHHHHHHHHHHHhCCCceEEEeCCCCHHHHHHHHHhcccCCEEEEEccCCCCccccchHhhhcCcEEEeecccCCc
Q 017868          236 TNLQDIAEEVEKIQKAMGTGIDVSFDCAGLNKTMSTALGATCAGGKVCLVGMGHHEMTVPLTPAAVREVDVVGVFRYKNT  315 (365)
Q Consensus       236 ~~~~~~~~~i~~~~~~~~~~~d~vid~~g~~~~~~~~~~~l~~~G~~~~~g~~~~~~~~~~~~~~~~~~~i~~~~~~~~~  315 (365)
                      .  ++..+..+.+....+.++|+||||+|.+..++.++++++++|+++.+|.......++...++.|++++.|++.+.++
T Consensus        80 ~--~~~~~~~~~~~~~~g~g~Dvvid~~G~~~~~~~a~~~~~~gG~iv~~G~~~~~~~~~~~~~~~k~l~i~Gs~~~~~~  157 (171)
T d1pl8a2          80 K--ESPQEIARKVEGQLGCKPEVTIECTGAEASIQAGIYATRSGGTLVLVGLGSEMTTVPLLHAAIREVDIKGVFRYCNT  157 (171)
T ss_dssp             S--CCHHHHHHHHHHHHTSCCSEEEECSCCHHHHHHHHHHSCTTCEEEECSCCCSCCCCCHHHHHHTTCEEEECCSCSSC
T ss_pred             c--cccccccccccccCCCCceEEEeccCCchhHHHHHHHhcCCCEEEEEecCCCCCccCHHHHHHCCcEEEEEeCCHhH
Confidence            4  55555666666566889999999999998999999999999999999987777788888899999999999988889


Q ss_pred             HHHHHHHHHcCCC
Q 017868          316 WPLCLELLRSGKI  328 (365)
Q Consensus       316 ~~~~~~~l~~g~~  328 (365)
                      ++++++++++|++
T Consensus       158 ~~~al~li~~gki  170 (171)
T d1pl8a2         158 WPVAISMLASKSV  170 (171)
T ss_dssp             HHHHHHHHHTTSC
T ss_pred             HHHHHHHHHcCCC
Confidence            9999999999987

>d1e3ja2 c.2.1.1 (A:143-312) Ketose reductase (sorbitol dehydrogenase) {Silverleaf whitefly (Bemisia argentifolii) [TaxId: 77855]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Alcohol dehydrogenase-like, C-terminal domain
domain: Ketose reductase (sorbitol dehydrogenase)
species: Silverleaf whitefly (Bemisia argentifolii) [TaxId: 77855]

Probab=99.96  E-value=1.9e-27  Score=192.90  Aligned_cols=170  Identities=47%  Similarity=0.785  Sum_probs=155.1

Q ss_pred             CCcchhccchhhHHHHHHHHhcCCCCCCEEEEEcCCHHHHHHHHHHHHHCCCCeEEEEeCChhHHHHHHHcCCCEEEeCC
Q 017868          156 VSLEEGAMCEPLSVGLHACRRANIGPETNVLIMGAGPIGLVTMLGAPRAFGAPRIVIVDVDDYRLSVAKEIGADNIVKVS  235 (365)
Q Consensus       156 ~~~~~a~~~~~~~~a~~~~~~~~~~~g~~vlI~G~g~~G~~ai~~l~~~~g~~~vi~v~~~~~~~~~~~~~g~~~~~~~~  235 (365)
                      +|+++|++++|++|||++++++++++|++|||+|+|++|++++| +++..|+ +|++++++++|.++++++|++.+++++
T Consensus         1 VS~e~Aal~ePla~a~~a~~~~~~~~g~~vlV~G~G~vG~~~~~-~ak~~Ga-~vi~v~~~~~r~~~a~~~ga~~~~~~~   78 (170)
T d1e3ja2           1 VSLEEGALLEPLSVGVHACRRAGVQLGTTVLVIGAGPIGLVSVL-AAKAYGA-FVVCTARSPRRLEVAKNCGADVTLVVD   78 (170)
T ss_dssp             SCHHHHHTHHHHHHHHHHHHHHTCCTTCEEEEECCSHHHHHHHH-HHHHTTC-EEEEEESCHHHHHHHHHTTCSEEEECC
T ss_pred             CCHHHHHHHHHHHHHHHHHHHhCCCCCCEEEEEcccccchhhHh-hHhhhcc-cccccchHHHHHHHHHHcCCcEEEecc
Confidence            57899999999999999999999999999999999999999999 9999999 799999999999999999999988877


Q ss_pred             CCcccHHHHHHHHHHHhCCCceEEEeCCCCHHHHHHHHHhcccCCEEEEEccCCCCccccchHhhhcCcEEEeecccCCc
Q 017868          236 TNLQDIAEEVEKIQKAMGTGIDVSFDCAGLNKTMSTALGATCAGGKVCLVGMGHHEMTVPLTPAAVREVDVVGVFRYKNT  315 (365)
Q Consensus       236 ~~~~~~~~~i~~~~~~~~~~~d~vid~~g~~~~~~~~~~~l~~~G~~~~~g~~~~~~~~~~~~~~~~~~~i~~~~~~~~~  315 (365)
                      ....+..+..+.+.+..+.++|+||||+|.+..++.++++++++|+++.+|....+..++...++.|++++.|++.+.++
T Consensus        79 ~~~~~~~~~~~~~~~~~g~g~D~vid~~g~~~~~~~a~~~~~~~G~iv~~G~~~~~~~~~~~~~~~k~i~i~gs~~~~~~  158 (170)
T d1e3ja2          79 PAKEEESSIIERIRSAIGDLPNVTIDCSGNEKCITIGINITRTGGTLMLVGMGSQMVTVPLVNACAREIDIKSVFRYCND  158 (170)
T ss_dssp             TTTSCHHHHHHHHHHHSSSCCSEEEECSCCHHHHHHHHHHSCTTCEEEECSCCSSCCCCCHHHHHTTTCEEEECCSCSSC
T ss_pred             ccccccchhhhhhhcccccCCceeeecCCChHHHHHHHHHHhcCCceEEEecCCCCCCcCHHHHHHCCCEEEEEECCHHH
Confidence            77677777777777777889999999999988899999999999999999987766677888899999999999988889


Q ss_pred             HHHHHHHHHcCC
Q 017868          316 WPLCLELLRSGK  327 (365)
Q Consensus       316 ~~~~~~~l~~g~  327 (365)
                      ++++++++++|+
T Consensus       159 ~~~ai~li~~Gk  170 (170)
T d1e3ja2         159 YPIALEMVASGR  170 (170)
T ss_dssp             HHHHHHHHHTTS
T ss_pred             HHHHHHHHHcCC
Confidence            999999999985

>d1qora1 b.35.1.2 (A:2-112,A:292-327) Quinone oxidoreductase {Escherichia coli [TaxId: 562]}

class: All beta proteins
fold: GroES-like
superfamily: GroES-like
family: Alcohol dehydrogenase-like, N-terminal domain
domain: Quinone oxidoreductase
species: Escherichia coli [TaxId: 562]

Probab=99.94  E-value=5.8e-27  Score=184.61  Aligned_cols=132  Identities=24%  Similarity=0.267  Sum_probs=114.3

Q ss_pred             CCceEEEEecCCCCCCCcEEEEEeeeeeCcccHhhhhccccCCccCCCCcccCccceEEEEEeCCCCCCCCCCCEEEEcC
Q 017868           26 VNTLKIQPFELPSLGPYDVLVRMKAVGICGSDVHYLKTLRCADFVVKEPMVIGHECAGVIEKVGSEVKTLVPGDRVALEP  105 (365)
Q Consensus        26 ~~~l~~~~~~~p~~~~~eVlI~v~~~~l~~~D~~~~~g~~~~~~~~~~p~~~G~e~~G~V~~vG~~v~~~~~Gd~V~~~~  105 (365)
                      ++.|++.+++.|+|++|||+|||.++++|+.|++.+.|.+.   ...+|.++|||++|+|+++|+++++|++||||+...
T Consensus        12 pe~l~~~e~~~P~p~~~eVlVkv~a~~in~~D~~~~~G~~~---~~~~p~~~G~e~~G~V~~vG~~v~~~~vGdrV~~~~   88 (147)
T d1qora1          12 PEVLQAVEFTPADPAENEIQVENKAIGINFIDTYIRSGLYP---PPSLPSGLGTEAAGIVSKVGSGVKHIKAGDRVVYAQ   88 (147)
T ss_dssp             GGGCEEEECCCCCCCTTEEEEEEEEEECCHHHHHHHHTSSC---CSSSSBCCCSCEEEEEEEECTTCCSCCTTCEEEESC
T ss_pred             CceeEEEEecCCCCCCCEEEEEEEEecccceeeeeecCCCC---CCcceeeeccccccceeeeeeecccccccceeeeec
Confidence            45799999999999999999999999999999999988643   246789999999999999999999999999997532


Q ss_pred             CcCCCCCccccCCCCCCCCCccccccCCCCcceeeEEeecCCceEECCCCCCcchhcc--ch-hhHHHHHHHHhcCCCCC
Q 017868          106 GISCWRCDHCKGGRYNLCPEMKFFATPPVHGSLANQVVHPADLCFKLPDNVSLEEGAM--CE-PLSVGLHACRRANIGPE  182 (365)
Q Consensus       106 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~v~~~~~~~iP~~~~~~~a~~--~~-~~~~a~~~~~~~~~~~g  182 (365)
                                                 ...|+|+||++++.+.++++|++++++.|+.  ++ ..+++++++...++++|
T Consensus        89 ---------------------------~~~G~~ae~~~v~~~~~~~~P~~~~~~~a~a~~~~~~~~~~~~~l~~~~~~~G  141 (147)
T d1qora1          89 ---------------------------SALGAYSSVHNIIADKAAILPAAIKVDVAEQQKYPLKDAQRAHEILESRATQG  141 (147)
T ss_dssp             ---------------------------CSSCCSBSEEEEEGGGEEECCTTSCCCCCGGGEEEGGGHHHHHHHHHTTCCCB
T ss_pred             ---------------------------cccccceeEEEEehHHeEEcCcccchHHHHHHHHHHHHHHHHHHHHHhCCCCC
Confidence                                       2459999999999999999999998875543  33 56778888766789999


Q ss_pred             CEEEE
Q 017868          183 TNVLI  187 (365)
Q Consensus       183 ~~vlI  187 (365)
                      ++|||
T Consensus       142 ~~VLI  146 (147)
T d1qora1         142 SSLLI  146 (147)
T ss_dssp             CCEEE
T ss_pred             CEEEe
Confidence            99998

>d1xa0a1 b.35.1.2 (A:1-118,A:295-328) B. subtilis YhfP homologue {Bacillus stearothermophilus [TaxId: 1422]}

class: All beta proteins
fold: GroES-like
superfamily: GroES-like
family: Alcohol dehydrogenase-like, N-terminal domain
domain: B. subtilis YhfP homologue
species: Bacillus stearothermophilus [TaxId: 1422]

Probab=99.93  E-value=3.1e-26  Score=181.32  Aligned_cols=147  Identities=18%  Similarity=0.085  Sum_probs=118.5

Q ss_pred             hhcceeEEEecCC---ceEEEEecCCCCCCCcEEEEEeeeeeCcccHhhhhccccCCccCCCCcccCccceEEEEEeCCC
Q 017868           15 EEVNMAAWLLGVN---TLKIQPFELPSLGPYDVLVRMKAVGICGSDVHYLKTLRCADFVVKEPMVIGHECAGVIEKVGSE   91 (365)
Q Consensus        15 ~~~~~~~~~~~~~---~l~~~~~~~p~~~~~eVlI~v~~~~l~~~D~~~~~g~~~~~~~~~~p~~~G~e~~G~V~~vG~~   91 (365)
                      |.++||+++.+.+   .++++++++|+|++|||||||.++|||++|+..+.|...  .....|+++|+|++|+|++  .+
T Consensus         1 m~~~KA~v~~~~~~~~~~~i~~v~~P~~~~~eVlVkV~a~gin~~D~~~~~g~~~--~~~~~p~v~g~e~~G~v~~--~~   76 (152)
T d1xa0a1           1 MSAFQAFVVNKTETEFTAGVQTISMDDLPEGDVLVRVHYSSVNYKDGLASIPDGK--IVKTYPFVPGIDLAGVVVS--SQ   76 (152)
T ss_dssp             CCEEEEEEEEEETTEEEEEEEEEEGGGSCSCSEEEEEEEEECCHHHHHHTSGGGS--SCCSSSBCCCSEEEEEEEE--CC
T ss_pred             CCceEEEEEEecCCceEEEEEEccCCCCCCCEEEEEEEEeCCChHHHHHHhhccc--ccccccceeeeeeeeeeec--cC
Confidence            4678999998654   467889999999999999999999999999998887532  2246789999999999998  55


Q ss_pred             CCCCCCCCEEEEcCCcCCCCCccccCCCCCCCCCccccccCCCCcceeeEEeecCCceEECCCCCCcchhccch-hhHHH
Q 017868           92 VKTLVPGDRVALEPGISCWRCDHCKGGRYNLCPEMKFFATPPVHGSLANQVVHPADLCFKLPDNVSLEEGAMCE-PLSVG  170 (365)
Q Consensus        92 v~~~~~Gd~V~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~v~~~~~~~iP~~~~~~~a~~~~-~~~~a  170 (365)
                      ++.|++||+|+.....-                      ....+|+|+||+++++++++++|+++++ +|+.++ ...||
T Consensus        77 ~~~~~~g~~v~~~~~~~----------------------~~~~~G~~aEy~~v~~~~~~~iP~~l~~-~aa~l~~a~~ta  133 (152)
T d1xa0a1          77 HPRFREGDEVIATGYEI----------------------GVTHFGGYSEYARLHGEWLVPLPKGLER-IAQEISLAELPQ  133 (152)
T ss_dssp             SSSCCTTCEEEEESTTB----------------------TTTBCCSSBSEEEECGGGCEECCTTHHH-HEEEEEGGGHHH
T ss_pred             CCccccCCEEEEecCcc----------------------ccccCCCcceeeeehhhccccCCCCCCH-HHHHHHHHHHHH
Confidence            67899999998653211                      1235699999999999999999999985 566665 55677


Q ss_pred             HHHH-HhcCCCCCCEEEEEc
Q 017868          171 LHAC-RRANIGPETNVLIMG  189 (365)
Q Consensus       171 ~~~~-~~~~~~~g~~vlI~G  189 (365)
                      +.++ ...+++ |++|||+|
T Consensus       134 ~~~~~~~~~~~-G~tVL~l~  152 (152)
T d1xa0a1         134 ALKRILRGELR-GRTVVRLA  152 (152)
T ss_dssp             HHHHHHHTCCC-SEEEEECC
T ss_pred             HHHHHHhcCCC-CCEEEEcC
Confidence            7665 567775 99999975

>d1iz0a1 b.35.1.2 (A:1-98,A:270-302) Quinone oxidoreductase {Thermus thermophilus [TaxId: 274]}

class: All beta proteins
fold: GroES-like
superfamily: GroES-like
family: Alcohol dehydrogenase-like, N-terminal domain
domain: Quinone oxidoreductase
species: Thermus thermophilus [TaxId: 274]

Probab=99.93  E-value=1.2e-25  Score=172.26  Aligned_cols=128  Identities=21%  Similarity=0.209  Sum_probs=111.1

Q ss_pred             ceeEEEecC-CceEEEEecCCCCCCCcEEEEEeeeeeCcccHhhhhccccCCccCCCCcccCccceEEEEEeCCCCCCCC
Q 017868           18 NMAAWLLGV-NTLKIQPFELPSLGPYDVLVRMKAVGICGSDVHYLKTLRCADFVVKEPMVIGHECAGVIEKVGSEVKTLV   96 (365)
Q Consensus        18 ~~~~~~~~~-~~l~~~~~~~p~~~~~eVlI~v~~~~l~~~D~~~~~g~~~~~~~~~~p~~~G~e~~G~V~~vG~~v~~~~   96 (365)
                      |||+++.+. +++++++++.|+|+++||+|||.++++|++|+..+.|.+..  ...+|+++|+|++|+|           
T Consensus         1 MkA~~~~~~G~~l~~~e~~~p~p~~~eVlVkv~a~gin~~D~~~~~G~~~~--~~~~P~v~G~E~~G~V-----------   67 (131)
T d1iz0a1           1 MKAWVLKRLGGPLELVDLPEPEAEEGEVVLRVEAVGLNFADHLMRLGAYLT--RLHPPFIPGMEVVGVV-----------   67 (131)
T ss_dssp             CEEEEECSTTSCEEEEECCCCCCCTTEEEEEEEEEEECHHHHHHHHTCSSS--CCCSSBCCCCEEEEEE-----------
T ss_pred             CcEEEEccCCCCCEEEEccCCCCCCCEEEEEEEEEeccccccccccccccc--cccceeEeeeeeEEee-----------
Confidence            688888876 46999999999999999999999999999999999886433  2468999999999999           


Q ss_pred             CCCEEEEcCCcCCCCCccccCCCCCCCCCccccccCCCCcceeeEEeecCCceEECCCCCCcchhccch-hhHHHHHHHH
Q 017868           97 PGDRVALEPGISCWRCDHCKGGRYNLCPEMKFFATPPVHGSLANQVVHPADLCFKLPDNVSLEEGAMCE-PLSVGLHACR  175 (365)
Q Consensus        97 ~Gd~V~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~v~~~~~~~iP~~~~~~~a~~~~-~~~~a~~~~~  175 (365)
                      +||||.+..                            .+|+|+||+++++++++++|+++++++|++++ .+.|||+++.
T Consensus        68 vGd~V~~~~----------------------------~~G~~aey~~v~~~~~~~~P~~~~~~~aa~~~~~~~Ta~~al~  119 (131)
T d1iz0a1          68 EGRRYAALV----------------------------PQGGLAERVAVPKGALLPLPEGRPVVGPVFPFAEAEAAFRALL  119 (131)
T ss_dssp             TTEEEEEEC----------------------------SSCCSBSEEEEEGGGCEECCTTCCCEEEEEEGGGHHHHHHHTT
T ss_pred             ccceEEEEe----------------------------ccCccceeeeeCHHHeEEccCCCCHHHHHHHHHHHHHHHHHHH
Confidence            399998762                            45999999999999999999999999999886 7889999984


Q ss_pred             hcCCCCCCEEEE
Q 017868          176 RANIGPETNVLI  187 (365)
Q Consensus       176 ~~~~~~g~~vlI  187 (365)
                      . +.+.|++||+
T Consensus       120 ~-~g~~g~tvl~  130 (131)
T d1iz0a1         120 D-RGHTGKVVVR  130 (131)
T ss_dssp             C-TTCCBEEEEE
T ss_pred             h-cccCCCEEEE
Confidence            3 2266999886

>d1jqba2 c.2.1.1 (A:1140-1313) Bacterial secondary alcohol dehydrogenase {Clostridium beijerinckii [TaxId: 1520]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Alcohol dehydrogenase-like, C-terminal domain
domain: Bacterial secondary alcohol dehydrogenase
species: Clostridium beijerinckii [TaxId: 1520]

Probab=99.92  E-value=4.6e-25  Score=178.53  Aligned_cols=167  Identities=21%  Similarity=0.317  Sum_probs=139.8

Q ss_pred             CCcchhccch-hhHHHHHHHHhcCCCCCCEEEEEcCCHHHHHHHHHHHHHCCCCeEEEEeCChhHHHHHHHcCCCEEEeC
Q 017868          156 VSLEEGAMCE-PLSVGLHACRRANIGPETNVLIMGAGPIGLVTMLGAPRAFGAPRIVIVDVDDYRLSVAKEIGADNIVKV  234 (365)
Q Consensus       156 ~~~~~a~~~~-~~~~a~~~~~~~~~~~g~~vlI~G~g~~G~~ai~~l~~~~g~~~vi~v~~~~~~~~~~~~~g~~~~~~~  234 (365)
                      +|+++|+.++ +++|||++++.+++++|++|||+|+|++|++++| +++.+|+++|++++++++|.++++++|+++++++
T Consensus         1 ip~e~A~~l~~~~~ta~~a~~~a~~~~g~~VlI~GaG~vGl~~~q-~ak~~Ga~~Vi~~d~~~~r~~~a~~lGa~~~i~~   79 (174)
T d1jqba2           1 MPLENAVMITDMMTTGFHGAELADIEMGSSVVVIGIGAVGLMGIA-GAKLRGAGRIIGVGSRPICVEAAKFYGATDILNY   79 (174)
T ss_dssp             SCHHHHHTTTTHHHHHHHHHHHTTCCTTCCEEEECCSHHHHHHHH-HHHTTTCSCEEEECCCHHHHHHHHHHTCSEEECG
T ss_pred             CCHHHHHHhhhHHHHHHHHHHHhCCCCCCEEEEEcCCcchhhhhh-hhhcccccccccccchhhhHHHHHhhCccccccc
Confidence            5789999885 8999999999999999999999999999999999 9999999889999999999999999999999886


Q ss_pred             CCCcccHHHHHHHHHHHhCCCceEEEeCCCCHHHHHHHHHhcccCCEEEEEccCCCCccccchH----hhhcCcEEEeec
Q 017868          235 STNLQDIAEEVEKIQKAMGTGIDVSFDCAGLNKTMSTALGATCAGGKVCLVGMGHHEMTVPLTP----AAVREVDVVGVF  310 (365)
Q Consensus       235 ~~~~~~~~~~i~~~~~~~~~~~d~vid~~g~~~~~~~~~~~l~~~G~~~~~g~~~~~~~~~~~~----~~~~~~~i~~~~  310 (365)
                      .  ++++.+.+++++.  +.++|+||||+|.+..+++++++++++|+++.+|.......++...    ...+.+++.+..
T Consensus        80 ~--~~~~~~~v~~~t~--g~G~D~vid~~g~~~~~~~a~~~~~~~G~iv~~G~~~~~~~~~~~~~~~~~~~~~~~i~g~~  155 (174)
T d1jqba2          80 K--NGHIEDQVMKLTN--GKGVDRVIMAGGGSETLSQAVKMVKPGGIISNINYHGSGDALLIPRVEWGCGMAHKTIKGGL  155 (174)
T ss_dssp             G--GSCHHHHHHHHTT--TSCEEEEEECSSCTTHHHHHHHHEEEEEEEEECCCCCSSSEEEEETTTTGGGTBCCEEEEBC
T ss_pred             c--chhHHHHHHHHhh--ccCcceEEEccCCHHHHHHHHHHHhcCCEEEEEeecCCCCcCcCcHhHHHHHhCccEEEEec
Confidence            4  4678888877754  7889999999998888999999999999999998765443333222    345778888876


Q ss_pred             cc--CCcHHHHHHHHHcCC
Q 017868          311 RY--KNTWPLCLELLRSGK  327 (365)
Q Consensus       311 ~~--~~~~~~~~~~l~~g~  327 (365)
                      ..  +..++.+.+++++|+
T Consensus       156 ~~~~r~~~e~l~~li~~gk  174 (174)
T d1jqba2         156 CPGGRLRAERLRDMVVYNR  174 (174)
T ss_dssp             CCCHHHHHHHHHHHHHTTS
T ss_pred             CCCCcccHHHHHHHHHcCC
Confidence            43  344667778888774

>d1jvba2 c.2.1.1 (A:144-313) Alcohol dehydrogenase {Archaeon Sulfolobus solfataricus [TaxId: 2287]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Alcohol dehydrogenase-like, C-terminal domain
domain: Alcohol dehydrogenase
species: Archaeon Sulfolobus solfataricus [TaxId: 2287]

Probab=99.92  E-value=8.6e-25  Score=176.97  Aligned_cols=167  Identities=26%  Similarity=0.379  Sum_probs=148.1

Q ss_pred             CCcchhccch-hhHHHHHHHHhcCCCCCCEEEEEcC-CHHHHHHHHHHHHHCCCCeEEEEeCChhHHHHHHHcCCCEEEe
Q 017868          156 VSLEEGAMCE-PLSVGLHACRRANIGPETNVLIMGA-GPIGLVTMLGAPRAFGAPRIVIVDVDDYRLSVAKEIGADNIVK  233 (365)
Q Consensus       156 ~~~~~a~~~~-~~~~a~~~~~~~~~~~g~~vlI~G~-g~~G~~ai~~l~~~~g~~~vi~v~~~~~~~~~~~~~g~~~~~~  233 (365)
                      +++.+||.++ ...|||+++++.++++|++|||+|+ |++|+++++ +++..|...|++++.+++|.++++++|++.+++
T Consensus         1 l~~~eAA~l~c~~~Ta~~al~~~~~~~g~~vlV~G~~G~vG~~~~~-~~~~~g~~~V~~~~~~~~~~~~~~~~Ga~~~i~   79 (170)
T d1jvba2           1 LNAVEAAPLTCSGITTYRAVRKASLDPTKTLLVVGAGGGLGTMAVQ-IAKAVSGATIIGVDVREEAVEAAKRAGADYVIN   79 (170)
T ss_dssp             SCHHHHGGGGTHHHHHHHHHHHTTCCTTCEEEEETTTSHHHHHHHH-HHHHHTCCEEEEEESSHHHHHHHHHHTCSEEEE
T ss_pred             CCHHHHHHHHHHHHHHHHHHHHhCCCCCCEEEEEeccccceeeeee-cccccccccccccccchhhHHHHHHcCCceeec
Confidence            4678899887 6778999999999999999999996 999999999 888889889999999999999999999999988


Q ss_pred             CCCCcccHHHHHHHHHHHhCCCceEEEeCCCCHHHHHHHHHhcccCCEEEEEccCCCCccccchHhhhcCcEEEeeccc-
Q 017868          234 VSTNLQDIAEEVEKIQKAMGTGIDVSFDCAGLNKTMSTALGATCAGGKVCLVGMGHHEMTVPLTPAAVREVDVVGVFRY-  312 (365)
Q Consensus       234 ~~~~~~~~~~~i~~~~~~~~~~~d~vid~~g~~~~~~~~~~~l~~~G~~~~~g~~~~~~~~~~~~~~~~~~~i~~~~~~-  312 (365)
                      ++  .+++.+.+++.+  .++++|++|||+|+...++.++++++++|+++.+|....+..++...++++++++.|++.+ 
T Consensus        80 ~~--~~~~~~~~~~~~--~~~~~d~vid~~g~~~~~~~a~~~l~~~G~iv~~G~~~~~~~~~~~~~~~k~i~i~Gs~~~~  155 (170)
T d1jvba2          80 AS--MQDPLAEIRRIT--ESKGVDAVIDLNNSEKTLSVYPKALAKQGKYVMVGLFGADLHYHAPLITLSEIQFVGSLVGN  155 (170)
T ss_dssp             TT--TSCHHHHHHHHT--TTSCEEEEEESCCCHHHHTTGGGGEEEEEEEEECCSSCCCCCCCHHHHHHHTCEEEECCSCC
T ss_pred             cC--CcCHHHHHHHHh--hcccchhhhcccccchHHHhhhhhcccCCEEEEeccccCccccCHHHHHhCCcEEEEEecCC
Confidence            54  467777776654  3778999999999988899999999999999999988777888888899999999999876 


Q ss_pred             CCcHHHHHHHHHcCC
Q 017868          313 KNTWPLCLELLRSGK  327 (365)
Q Consensus       313 ~~~~~~~~~~l~~g~  327 (365)
                      .++++++++++++|+
T Consensus       156 ~~d~~~~l~lv~~GK  170 (170)
T d1jvba2         156 QSDFLGIMRLAEAGK  170 (170)
T ss_dssp             HHHHHHHHHHHHTTS
T ss_pred             HHHHHHHHHHHHcCC
Confidence            577999999999885

>d1f8fa2 c.2.1.1 (A:163-336) Benzyl alcohol dehydrogenase {Acinetobacter calcoaceticus [TaxId: 471]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Alcohol dehydrogenase-like, C-terminal domain
domain: Benzyl alcohol dehydrogenase
species: Acinetobacter calcoaceticus [TaxId: 471]

Probab=99.92  E-value=4.4e-24  Score=173.13  Aligned_cols=166  Identities=25%  Similarity=0.435  Sum_probs=142.9

Q ss_pred             CCcchhccch-hhHHHHHHH-HhcCCCCCCEEEEEcCCHHHHHHHHHHHHHCCCCeEEEEeCChhHHHHHHHcCCCEEEe
Q 017868          156 VSLEEGAMCE-PLSVGLHAC-RRANIGPETNVLIMGAGPIGLVTMLGAPRAFGAPRIVIVDVDDYRLSVAKEIGADNIVK  233 (365)
Q Consensus       156 ~~~~~a~~~~-~~~~a~~~~-~~~~~~~g~~vlI~G~g~~G~~ai~~l~~~~g~~~vi~v~~~~~~~~~~~~~g~~~~~~  233 (365)
                      ++++.|+.++ ...|||+++ +.+++++|++|||+|+|++|++++| +++.+|++++++++.+++|+++++++|++++++
T Consensus         1 vP~e~aapl~ca~~Ta~~a~~~~~~~~~g~~VlI~G~G~iG~~~~~-~ak~~g~~~v~~~~~~~~k~~~a~~~Ga~~~i~   79 (174)
T d1f8fa2           1 VPIELLGPLGCGIQTGAGACINALKVTPASSFVTWGAGAVGLSALL-AAKVCGASIIIAVDIVESRLELAKQLGATHVIN   79 (174)
T ss_dssp             SCGGGTGGGGTHHHHHHHHHHTTTCCCTTCEEEEESCSHHHHHHHH-HHHHHTCSEEEEEESCHHHHHHHHHHTCSEEEE
T ss_pred             CCHHHHHHHhhHHHHHHHHHHHhhCCCCCCEEEEeCCCHHHhhhhh-cccccccceeeeeccHHHHHHHHHHcCCeEEEe
Confidence            3567788777 578899996 5689999999999999999999999 999999999999999999999999999999988


Q ss_pred             CCCCcccHHHHHHHHHHHhCCCceEEEeCCCCHHHHHHHHHhcccCCEEEEEccCC--CCccccchHhhhcCcEEEeecc
Q 017868          234 VSTNLQDIAEEVEKIQKAMGTGIDVSFDCAGLNKTMSTALGATCAGGKVCLVGMGH--HEMTVPLTPAAVREVDVVGVFR  311 (365)
Q Consensus       234 ~~~~~~~~~~~i~~~~~~~~~~~d~vid~~g~~~~~~~~~~~l~~~G~~~~~g~~~--~~~~~~~~~~~~~~~~i~~~~~  311 (365)
                      +.  .+++.+.+++++   ++++|+||||+|....++.+++.++++|+++.+|...  ....++...+++++++++|++.
T Consensus        80 ~~--~~~~~~~i~~~t---~gg~D~vid~~G~~~~~~~~~~~~~~~G~i~~~G~~~~~~~~~~~~~~~~~k~~~i~Gs~~  154 (174)
T d1f8fa2          80 SK--TQDPVAAIKEIT---DGGVNFALESTGSPEILKQGVDALGILGKIAVVGAPQLGTTAQFDVNDLLLGGKTILGVVE  154 (174)
T ss_dssp             TT--TSCHHHHHHHHT---TSCEEEEEECSCCHHHHHHHHHTEEEEEEEEECCCCSTTCCCCCCHHHHHHTTCEEEECSG
T ss_pred             CC--CcCHHHHHHHHc---CCCCcEEEEcCCcHHHHHHHHhcccCceEEEEEeecCCCcccccCHHHHHHCCCEEEEEEe
Confidence            64  467888887764   5699999999999889999999999999999998643  2346777788999999999874


Q ss_pred             c----CCcHHHHHHHHHcCC
Q 017868          312 Y----KNTWPLCLELLRSGK  327 (365)
Q Consensus       312 ~----~~~~~~~~~~l~~g~  327 (365)
                      .    .++++++++|+++|+
T Consensus       155 g~~~~~~~~~~~~~l~~~Gk  174 (174)
T d1f8fa2         155 GSGSPKKFIPELVRLYQQGK  174 (174)
T ss_dssp             GGSCHHHHHHHHHHHHHTTS
T ss_pred             cCCChHHHHHHHHHHHHcCC
Confidence            3    457889999999885

>d1yb5a2 c.2.1.1 (A:121-294) Quinone oxidoreductase {Human (Homo sapiens) [TaxId: 9606]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Alcohol dehydrogenase-like, C-terminal domain
domain: Quinone oxidoreductase
species: Human (Homo sapiens) [TaxId: 9606]

Probab=99.91  E-value=2.9e-24  Score=174.44  Aligned_cols=163  Identities=21%  Similarity=0.362  Sum_probs=137.9

Q ss_pred             CCcchhccch-hhHHHHHHH-HhcCCCCCCEEEEEcC-CHHHHHHHHHHHHHCCCCeEEEEeCChhHHHHHHHcCCCEEE
Q 017868          156 VSLEEGAMCE-PLSVGLHAC-RRANIGPETNVLIMGA-GPIGLVTMLGAPRAFGAPRIVIVDVDDYRLSVAKEIGADNIV  232 (365)
Q Consensus       156 ~~~~~a~~~~-~~~~a~~~~-~~~~~~~g~~vlI~G~-g~~G~~ai~~l~~~~g~~~vi~v~~~~~~~~~~~~~g~~~~~  232 (365)
                      +|+++||.++ ++.|||+++ +.+++++|++|||+|+ |++|++++| +++.+|+ ++++++++++|.++++++|+++++
T Consensus         1 ls~~~AA~l~~~~~TA~~al~~~~~~~~g~~VlV~Ga~G~vG~~aiq-~a~~~G~-~vi~~~~~~~~~~~~~~~Ga~~vi   78 (174)
T d1yb5a2           1 LDFKQGAAIGIPYFTAYRALIHSACVKAGESVLVHGASGGVGLAACQ-IARAYGL-KILGTAGTEEGQKIVLQNGAHEVF   78 (174)
T ss_dssp             SCHHHHTTTHHHHHHHHHHHHTTSCCCTTCEEEEETCSSHHHHHHHH-HHHHTTC-EEEEEESSHHHHHHHHHTTCSEEE
T ss_pred             CCHHHHHHhHHHHHHHHHHHHHHhCCCCCCEEEEEeccccccccccc-cccccCc-ccccccccccccccccccCccccc
Confidence            5889999887 889999998 4688999999999986 999999999 9999999 577777889999999999999999


Q ss_pred             eCCCCcccHHHHHHHHHHHhCCCceEEEeCCCCHHHHHHHHHhcccCCEEEEEccCCCCccccchHhhhcCcEEEeeccc
Q 017868          233 KVSTNLQDIAEEVEKIQKAMGTGIDVSFDCAGLNKTMSTALGATCAGGKVCLVGMGHHEMTVPLTPAAVREVDVVGVFRY  312 (365)
Q Consensus       233 ~~~~~~~~~~~~i~~~~~~~~~~~d~vid~~g~~~~~~~~~~~l~~~G~~~~~g~~~~~~~~~~~~~~~~~~~i~~~~~~  312 (365)
                      ++.  ++++.+.+++.+.  +.++|++||++|. ..++.++++++++|+++.+|.. ....++...++.+++++.+++.+
T Consensus        79 ~~~--~~~~~~~i~~~t~--~~g~d~v~d~~g~-~~~~~~~~~l~~~G~iv~~G~~-~~~~~~~~~~~~k~~~i~g~~~~  152 (174)
T d1yb5a2          79 NHR--EVNYIDKIKKYVG--EKGIDIIIEMLAN-VNLSKDLSLLSHGGRVIVVGSR-GTIEINPRDTMAKESSIIGVTLF  152 (174)
T ss_dssp             ETT--STTHHHHHHHHHC--TTCEEEEEESCHH-HHHHHHHHHEEEEEEEEECCCC-SCEEECTHHHHTTTCEEEECCGG
T ss_pred             ccc--cccHHHHhhhhhc--cCCceEEeecccH-HHHHHHHhccCCCCEEEEEecC-CCCCCCHHHHHHCCCEEEEEEec
Confidence            864  4688888877654  7899999999995 5889999999999999999864 34567777889999999998654


Q ss_pred             ---CCcHHHHHHHHHcC
Q 017868          313 ---KNTWPLCLELLRSG  326 (365)
Q Consensus       313 ---~~~~~~~~~~l~~g  326 (365)
                         .+.+++++++++++
T Consensus       153 ~~~~~~~~~~~~~l~~g  169 (174)
T d1yb5a2         153 SSTKEEFQQYAAALQAG  169 (174)
T ss_dssp             GCCHHHHHHHHHHHHHH
T ss_pred             CCCHHHHHHHHHHHHHH
Confidence               34567777776654

>d1e3ia2 c.2.1.1 (A:168-341) Alcohol dehydrogenase {Mouse (Mus musculus), class II [TaxId: 10090]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Alcohol dehydrogenase-like, C-terminal domain
domain: Alcohol dehydrogenase
species: Mouse (Mus musculus), class II [TaxId: 10090]

Probab=99.91  E-value=1.6e-23  Score=169.07  Aligned_cols=166  Identities=26%  Similarity=0.427  Sum_probs=136.1

Q ss_pred             Ccchhccch-hhHHHHHHH-HhcCCCCCCEEEEEcCCHHHHHHHHHHHHHCCCCeEEEEeCChhHHHHHHHcCCCEEEeC
Q 017868          157 SLEEGAMCE-PLSVGLHAC-RRANIGPETNVLIMGAGPIGLVTMLGAPRAFGAPRIVIVDVDDYRLSVAKEIGADNIVKV  234 (365)
Q Consensus       157 ~~~~a~~~~-~~~~a~~~~-~~~~~~~g~~vlI~G~g~~G~~ai~~l~~~~g~~~vi~v~~~~~~~~~~~~~g~~~~~~~  234 (365)
                      ++++||.+. .+.|+|+++ +.+++++|++|||+|+|++|++++| +++.+|+++|++++.+++|+++++++|++.++++
T Consensus         2 ~Le~aa~l~Ca~~T~~~a~~~~a~v~~G~~VlV~G~G~iGl~a~~-~ak~~Ga~~Vi~~d~~~~r~~~a~~~Ga~~~i~~   80 (174)
T d1e3ia2           2 NLERVCLIGCGFSSGYGAAINTAKVTPGSTCAVFGLGCVGLSAII-GCKIAGASRIIAIDINGEKFPKAKALGATDCLNP   80 (174)
T ss_dssp             CHHHHGGGGTHHHHHHHHHHTTSCCCTTCEEEEECCSHHHHHHHH-HHHHTTCSEEEEECSCGGGHHHHHHTTCSEEECG
T ss_pred             CHHHHHHhhhHHHHHHHHHHHhhCCCCCCEEEEECCChHHHHHHH-HHHHhCCceeeeeccchHHHHHHHHhCCCcccCC
Confidence            456788876 688999997 5799999999999999999999999 9999999999999999999999999999999886


Q ss_pred             CCCcccHHHHHHHHHHHhCCCceEEEeCCCCHHHHHHHHHhcccC-CEEEEEccCCCCccccchHhhhcCcEEEeeccc-
Q 017868          235 STNLQDIAEEVEKIQKAMGTGIDVSFDCAGLNKTMSTALGATCAG-GKVCLVGMGHHEMTVPLTPAAVREVDVVGVFRY-  312 (365)
Q Consensus       235 ~~~~~~~~~~i~~~~~~~~~~~d~vid~~g~~~~~~~~~~~l~~~-G~~~~~g~~~~~~~~~~~~~~~~~~~i~~~~~~-  312 (365)
                      ...+... ..+...+  .++++|++|||+|.+..+++++++++++ |+++.+|.......++...+. .+.++.|++.. 
T Consensus        81 ~~~~~~~-~~~~~~~--~~~G~d~vie~~G~~~~~~~a~~~~~~g~G~~v~vG~~~~~~~i~~~~~~-~~k~i~Gs~~Gs  156 (174)
T d1e3ia2          81 RELDKPV-QDVITEL--TAGGVDYSLDCAGTAQTLKAAVDCTVLGWGSCTVVGAKVDEMTIPTVDVI-LGRSINGTFFGG  156 (174)
T ss_dssp             GGCSSCH-HHHHHHH--HTSCBSEEEESSCCHHHHHHHHHTBCTTTCEEEECCCSSSEEEEEHHHHH-TTCEEEECSGGG
T ss_pred             ccchhhh-hhhHhhh--hcCCCcEEEEecccchHHHHHHHHhhcCCeEEEecCCCCCccccchHHHh-ccCEEEEEEeeC
Confidence            5433333 3333332  3789999999999999999999999996 999999987666666655554 45688887643 


Q ss_pred             ---CCcHHHHHHHHHcCC
Q 017868          313 ---KNTWPLCLELLRSGK  327 (365)
Q Consensus       313 ---~~~~~~~~~~l~~g~  327 (365)
                         .+++.++++++++|+
T Consensus       157 ~~~~~d~p~li~l~~~GK  174 (174)
T d1e3ia2         157 WKSVDSVPNLVSDYKNKK  174 (174)
T ss_dssp             CCHHHHHHHHHHHHHTTS
T ss_pred             CChHHHHHHHHHHHHCcC
Confidence               456778888888875

>d1llua2 c.2.1.1 (A:144-309) Alcohol dehydrogenase {Pseudomonas aeruginosa [TaxId: 287]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Alcohol dehydrogenase-like, C-terminal domain
domain: Alcohol dehydrogenase
species: Pseudomonas aeruginosa [TaxId: 287]

Probab=99.91  E-value=1.1e-23  Score=169.67  Aligned_cols=163  Identities=23%  Similarity=0.354  Sum_probs=141.6

Q ss_pred             CCcchhccch-hhHHHHHHHHhcCCCCCCEEEEEcCCHHHHHHHHHHHHHCCCCeEEEEeCChhHHHHHHHcCCCEEEeC
Q 017868          156 VSLEEGAMCE-PLSVGLHACRRANIGPETNVLIMGAGPIGLVTMLGAPRAFGAPRIVIVDVDDYRLSVAKEIGADNIVKV  234 (365)
Q Consensus       156 ~~~~~a~~~~-~~~~a~~~~~~~~~~~g~~vlI~G~g~~G~~ai~~l~~~~g~~~vi~v~~~~~~~~~~~~~g~~~~~~~  234 (365)
                      +++++||.++ ...|||++++++++++|++|||+|+|++|++++| +++.+|+ +|++++++++|.++++++|+++++++
T Consensus         1 v~f~~aA~l~ca~~Ta~~al~~~~~~~g~~VlV~GaG~vG~~~~~-~ak~~G~-~Vi~~~~~~~~~~~a~~~Ga~~~i~~   78 (166)
T d1llua2           1 VEFAEIAPILCAGVTVYKGLKQTNARPGQWVAISGIGGLGHVAVQ-YARAMGL-HVAAIDIDDAKLELARKLGASLTVNA   78 (166)
T ss_dssp             SCHHHHGGGGTHHHHHHHHHHHHTCCTTCEEEEECCSHHHHHHHH-HHHHTTC-EEEEEESCHHHHHHHHHTTCSEEEET
T ss_pred             CCHHHHHHHHHHHHHHHHHHHHhCCCCCCEEEEeeccccHHHHHH-HHHHcCC-ccceecchhhHHHhhhccCccccccc
Confidence            4788999887 7789999999899999999999999999999999 9999997 79999999999999999999999886


Q ss_pred             CCCcccHHHHHHHHHHHhCCCceEEEeCCCCHHHHHHHHHhcccCCEEEEEccCCCCccccchHhhhcCcEEEeeccc-C
Q 017868          235 STNLQDIAEEVEKIQKAMGTGIDVSFDCAGLNKTMSTALGATCAGGKVCLVGMGHHEMTVPLTPAAVREVDVVGVFRY-K  313 (365)
Q Consensus       235 ~~~~~~~~~~i~~~~~~~~~~~d~vid~~g~~~~~~~~~~~l~~~G~~~~~g~~~~~~~~~~~~~~~~~~~i~~~~~~-~  313 (365)
                      ..  +++.+.+++.    ..+.+.++++++....++.++++++++|+++.+|....+..++...++.+++++.|++.+ .
T Consensus        79 ~~--~~~~~~~~~~----~~g~~~~i~~~~~~~~~~~~~~~l~~~G~iv~~G~~~~~~~~~~~~~~~k~~~i~Gs~~~~~  152 (166)
T d1llua2          79 RQ--EDPVEAIQRD----IGGAHGVLVTAVSNSAFGQAIGMARRGGTIALVGLPPGDFPTPIFDVVLKGLHIAGSIVGTR  152 (166)
T ss_dssp             TT--SCHHHHHHHH----HSSEEEEEECCSCHHHHHHHHTTEEEEEEEEECCCCSSEEEEEHHHHHHTTCEEEECCSCCH
T ss_pred             cc--hhHHHHHHHh----hcCCcccccccccchHHHHHHHHhcCCcEEEEEEecCCCccCCHHHHHhCCcEEEEEeecCH
Confidence            43  5666666543    246777777777788999999999999999999987777788888899999999999876 5


Q ss_pred             CcHHHHHHHHHcC
Q 017868          314 NTWPLCLELLRSG  326 (365)
Q Consensus       314 ~~~~~~~~~l~~g  326 (365)
                      ++++++++++++|
T Consensus       153 ~d~~e~l~l~~~G  165 (166)
T d1llua2         153 ADLQEALDFAGEG  165 (166)
T ss_dssp             HHHHHHHHHHHTT
T ss_pred             HHHHHHHHHHHCc
Confidence            6799999999887

>d1p0fa2 c.2.1.1 (A:1164-1337) Alcohol dehydrogenase {Frog (Rana perezi) [TaxId: 8403]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Alcohol dehydrogenase-like, C-terminal domain
domain: Alcohol dehydrogenase
species: Frog (Rana perezi) [TaxId: 8403]

Probab=99.91  E-value=3.5e-23  Score=167.39  Aligned_cols=166  Identities=22%  Similarity=0.336  Sum_probs=136.2

Q ss_pred             cchhccch-hhHHHHHHH-HhcCCCCCCEEEEEcCCHHHHHHHHHHHHHCCCCeEEEEeCChhHHHHHHHcCCCEEEeCC
Q 017868          158 LEEGAMCE-PLSVGLHAC-RRANIGPETNVLIMGAGPIGLVTMLGAPRAFGAPRIVIVDVDDYRLSVAKEIGADNIVKVS  235 (365)
Q Consensus       158 ~~~a~~~~-~~~~a~~~~-~~~~~~~g~~vlI~G~g~~G~~ai~~l~~~~g~~~vi~v~~~~~~~~~~~~~g~~~~~~~~  235 (365)
                      +.+||++. .+.|||+++ +.+++++|++|||+|+|++|++++| +++..|+++|++++.+++|+++++++|+++++++.
T Consensus         2 P~eaa~lgCa~~Ta~~a~~~~a~~~~G~~VlV~GaGgvGl~a~~-~ak~~G~~~Vi~~d~~~~kl~~a~~lGa~~~i~~~   80 (174)
T d1p0fa2           2 PLESCLIGCGFATGYGAAVNTAKVTPGSTCAVFGLGGVGFSAIV-GCKAAGASRIIGVGTHKDKFPKAIELGATECLNPK   80 (174)
T ss_dssp             CGGGGGGGTHHHHHHHHHHTTTCCCTTCEEEEECCSHHHHHHHH-HHHHHTCSEEEEECSCGGGHHHHHHTTCSEEECGG
T ss_pred             HHHHHhhhhHHHHHHHHHHHhhCCCCCCEEEEECCCchhHHHHH-HHHHcCCceeeccCChHHHHHHHHHcCCcEEEcCC
Confidence            45677775 788999997 6789999999999999999999999 99999999999999999999999999999999876


Q ss_pred             CCcccHHHHHHHHHHHhCCCceEEEeCCCCHHHHHHHHHhccc-CCEEEEEccCCCCccccchH-hhhcCcEEEeeccc-
Q 017868          236 TNLQDIAEEVEKIQKAMGTGIDVSFDCAGLNKTMSTALGATCA-GGKVCLVGMGHHEMTVPLTP-AAVREVDVVGVFRY-  312 (365)
Q Consensus       236 ~~~~~~~~~i~~~~~~~~~~~d~vid~~g~~~~~~~~~~~l~~-~G~~~~~g~~~~~~~~~~~~-~~~~~~~i~~~~~~-  312 (365)
                      ..+....+..+.   +.++++|++||++|.......++..+.+ +|+++.+|.......++... ...++++++|++.. 
T Consensus        81 ~~d~~~~~~~~~---~~~~G~d~vid~~g~~~~~~~~~~~~~~~~G~~v~vG~~~~~~~~~~~~~~~~~~~~i~Gs~~G~  157 (174)
T d1p0fa2          81 DYDKPIYEVICE---KTNGGVDYAVECAGRIETMMNALQSTYCGSGVTVVLGLASPNERLPLDPLLLLTGRSLKGSVFGG  157 (174)
T ss_dssp             GCSSCHHHHHHH---HTTSCBSEEEECSCCHHHHHHHHHTBCTTTCEEEECCCCCTTCCEEECTHHHHTTCEEEECSGGG
T ss_pred             CchhHHHHHHHH---hcCCCCcEEEEcCCCchHHHHHHHHHHHhcCceEEEEEecCccccccCHHHHhCCCEEEEEEeCC
Confidence            543334333332   2478999999999999888889988876 59999999766655665543 45678899998743 


Q ss_pred             --CCcHHHHHHHHHcCC
Q 017868          313 --KNTWPLCLELLRSGK  327 (365)
Q Consensus       313 --~~~~~~~~~~l~~g~  327 (365)
                        .+++.++++|+++|+
T Consensus       158 ~~~~d~~~lidl~~~gK  174 (174)
T d1p0fa2         158 FKGEEVSRLVDDYMKKK  174 (174)
T ss_dssp             CCGGGHHHHHHHHHTTS
T ss_pred             CCHHHHHHHHHHHHcCC
Confidence              468999999999875

>d1o89a1 b.35.1.2 (A:1-115,A:293-323) Hypothetical protein YhdH {Escherichia coli [TaxId: 562]}

class: All beta proteins
fold: GroES-like
superfamily: GroES-like
family: Alcohol dehydrogenase-like, N-terminal domain
domain: Hypothetical protein YhdH
species: Escherichia coli [TaxId: 562]

Probab=99.91  E-value=8.4e-24  Score=165.33  Aligned_cols=129  Identities=19%  Similarity=0.128  Sum_probs=106.4

Q ss_pred             ceeEEEecC---CceEEEEecCCCCCCCcEEEEEeeeeeCcccHhhhhccccCCccCCCCcccCccceEEEEEeCCCCCC
Q 017868           18 NMAAWLLGV---NTLKIQPFELPSLGPYDVLVRMKAVGICGSDVHYLKTLRCADFVVKEPMVIGHECAGVIEKVGSEVKT   94 (365)
Q Consensus        18 ~~~~~~~~~---~~l~~~~~~~p~~~~~eVlI~v~~~~l~~~D~~~~~g~~~~~~~~~~p~~~G~e~~G~V~~vG~~v~~   94 (365)
                      |||+++.+.   ..+++++++.|+|+++||+|||.+++||+.|...+.|.+..  ...+|.++|+|++|+|+++|.+  .
T Consensus         1 MkA~v~~~~~~~~~l~i~~v~~p~~~~geVlVkV~a~gin~~D~~~~~G~~~~--~~~~p~v~G~e~~G~V~~~~~~--~   76 (146)
T d1o89a1           1 LQALLLEQQDGKTLASVQTLDESRLPEGDVTVDVHWSSLNYKDALAITGKGKI--IRNFPMIPGIDFAGTVRTSEDP--R   76 (146)
T ss_dssp             CEEEEEECC---CEEEEEECCGGGSCSCSEEEEEEEEECCHHHHHHHHTCSSC--CCSSSBCCCSEEEEEEEEECST--T
T ss_pred             CeEEEEEcCCCceEEEEEEcCCCCCCCCEEEEEEeeccCccceeeEEEeeccc--ccccceeccccccccceeeccC--C
Confidence            788988855   35889999999999999999999999999999988875432  2467899999999999998774  6


Q ss_pred             CCCCCEEEEcCCcCCCCCccccCCCCCCCCCccccccCCCCcceeeEEeecCCceEECCCCCCcchhccchh-hHHHHH
Q 017868           95 LVPGDRVALEPGISCWRCDHCKGGRYNLCPEMKFFATPPVHGSLANQVVHPADLCFKLPDNVSLEEGAMCEP-LSVGLH  172 (365)
Q Consensus        95 ~~~Gd~V~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~v~~~~~~~iP~~~~~~~a~~~~~-~~~a~~  172 (365)
                      +++||+|+......                      ....+|+|+||+.+++++++++|+++++++|+++++ ..||+.
T Consensus        77 ~~~g~~v~~~~~~~----------------------g~~~~G~~Aey~~v~~~~vv~lP~~ls~~eAA~l~~a~~tA~~  133 (146)
T d1o89a1          77 FHAGQEVLLTGWGV----------------------GENHWGGLAEQARVKGDWLVAMPQGQAAKEISLSEAPNFAEAI  133 (146)
T ss_dssp             CCTTCEEEEECTTB----------------------TTTBCCSSBSEEEECGGGCEECCTTSCCEEECGGGHHHHHHHH
T ss_pred             ccceeeEEeecccc----------------------eecCCCcceeeeeeeeeeEEECCCCCCHHHHHHHHHHHHHHHH
Confidence            99999998752210                      123569999999999999999999999999999974 445543

>d1h2ba2 c.2.1.1 (A:155-326) Alcohol dehydrogenase {Archaeon Aeropyrum pernix [TaxId: 56636]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Alcohol dehydrogenase-like, C-terminal domain
domain: Alcohol dehydrogenase
species: Archaeon Aeropyrum pernix [TaxId: 56636]

Probab=99.90  E-value=2.9e-23  Score=168.02  Aligned_cols=163  Identities=24%  Similarity=0.354  Sum_probs=137.4

Q ss_pred             cchhccch-hhHHHHHHHHh-c-CCCCCCEEEEEcCCHHHHHHHHHHHHHCCCCeEEEEeCChhHHHHHHHcCCCEEEeC
Q 017868          158 LEEGAMCE-PLSVGLHACRR-A-NIGPETNVLIMGAGPIGLVTMLGAPRAFGAPRIVIVDVDDYRLSVAKEIGADNIVKV  234 (365)
Q Consensus       158 ~~~a~~~~-~~~~a~~~~~~-~-~~~~g~~vlI~G~g~~G~~ai~~l~~~~g~~~vi~v~~~~~~~~~~~~~g~~~~~~~  234 (365)
                      +.++|.++ +..|||+++++ . .+++|++|||+|+|++|++++| +++.+|+.++++++++++|.++++++|+++++++
T Consensus         6 l~eaA~l~~~~~Ta~~al~~~~~~~~~g~~vli~GaG~vG~~~~~-~a~~~g~~~vv~~~~~~~k~~~~~~~ga~~~i~~   84 (172)
T d1h2ba2           6 LVEMAPLADAGITAYRAVKKAARTLYPGAYVAIVGVGGLGHIAVQ-LLKVMTPATVIALDVKEEKLKLAERLGADHVVDA   84 (172)
T ss_dssp             HHHTGGGGTHHHHHHHHHHHHHTTCCTTCEEEEECCSHHHHHHHH-HHHHHCCCEEEEEESSHHHHHHHHHTTCSEEEET
T ss_pred             HHHHhHHHhHHHHHHHHHHHhhhccCCCCEEEEeCCChHHHHHHH-HHHhhcCcccccccchhHHHHHHhhcccceeecC
Confidence            34566665 78899999965 3 5899999999999999999999 8889999899999999999999999999999886


Q ss_pred             CCCcccHHHHHHHHHHHhCCCceEEEeCCCCHHHHHHHHHhcccCCEEEEEccCCCCccccchHhhhcCcEEEeeccc-C
Q 017868          235 STNLQDIAEEVEKIQKAMGTGIDVSFDCAGLNKTMSTALGATCAGGKVCLVGMGHHEMTVPLTPAAVREVDVVGVFRY-K  313 (365)
Q Consensus       235 ~~~~~~~~~~i~~~~~~~~~~~d~vid~~g~~~~~~~~~~~l~~~G~~~~~g~~~~~~~~~~~~~~~~~~~i~~~~~~-~  313 (365)
                      .+   +..+.+.+.  +.+.++|+|||++|+...++.++++++++|+++.+|.. .+.+++...++.++++++|++.+ .
T Consensus        85 ~~---~~~~~~~~~--~~~~g~d~vid~~g~~~~~~~a~~~l~~~G~iv~~G~~-~~~~~~~~~l~~k~~~i~Gs~~~~~  158 (172)
T d1h2ba2          85 RR---DPVKQVMEL--TRGRGVNVAMDFVGSQATVDYTPYLLGRMGRLIIVGYG-GELRFPTIRVISSEVSFEGSLVGNY  158 (172)
T ss_dssp             TS---CHHHHHHHH--TTTCCEEEEEESSCCHHHHHHGGGGEEEEEEEEECCCS-SCCCCCHHHHHHTTCEEEECCSCCH
T ss_pred             cc---cHHHHHHHh--hCCCCceEEEEecCcchHHHHHHHHHhCCCEEEEEeCc-ccccCCHHHHHhCCcEEEEEEecCH
Confidence            43   333334433  23788999999999988899999999999999999864 34567778899999999999876 5


Q ss_pred             CcHHHHHHHHHcCC
Q 017868          314 NTWPLCLELLRSGK  327 (365)
Q Consensus       314 ~~~~~~~~~l~~g~  327 (365)
                      ++++++++++++|+
T Consensus       159 ~d~~~~l~l~~~GK  172 (172)
T d1h2ba2         159 VELHELVTLALQGK  172 (172)
T ss_dssp             HHHHHHHHHHHTTS
T ss_pred             HHHHHHHHHHHcCC
Confidence            67999999999885

>d1vj0a2 c.2.1.1 (A:156-337) Hypothetical protein TM0436 {Thermotoga maritima [TaxId: 2336]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Alcohol dehydrogenase-like, C-terminal domain
domain: Hypothetical protein TM0436
species: Thermotoga maritima [TaxId: 2336]

Probab=99.90  E-value=1.5e-23  Score=171.48  Aligned_cols=165  Identities=21%  Similarity=0.341  Sum_probs=133.2

Q ss_pred             chhccc-hhhHHHHHHHH-hcCCCCCCEEEEEcCCHHHHHHHHHHHHHCCCCeEEEEeCChhHHHHHHHcCCCEEEeCCC
Q 017868          159 EEGAMC-EPLSVGLHACR-RANIGPETNVLIMGAGPIGLVTMLGAPRAFGAPRIVIVDVDDYRLSVAKEIGADNIVKVST  236 (365)
Q Consensus       159 ~~a~~~-~~~~~a~~~~~-~~~~~~g~~vlI~G~g~~G~~ai~~l~~~~g~~~vi~v~~~~~~~~~~~~~g~~~~~~~~~  236 (365)
                      +.+|.+ ....|||+++. ..++++|++|||+|+|++|++++| +++.+|+++|++++++++|.++++++|++.++++.+
T Consensus         4 ~~~a~~~c~~~ta~~al~~~~~~~~G~~VlV~GaG~iG~~~~~-~ak~~Ga~~Vi~~~~~~~~~~~a~~lGa~~vi~~~~   82 (182)
T d1vj0a2           4 DVLAMAMCSGATAYHAFDEYPESFAGKTVVIQGAGPLGLFGVV-IARSLGAENVIVIAGSPNRLKLAEEIGADLTLNRRE   82 (182)
T ss_dssp             HHHHHHTTHHHHHHHHHHTCSSCCBTCEEEEECCSHHHHHHHH-HHHHTTBSEEEEEESCHHHHHHHHHTTCSEEEETTT
T ss_pred             HHHHHhhcHHHHHHHHHHHHhCCCCCCEEEEECCCccchhhee-cccccccccccccccccccccccccccceEEEeccc
Confidence            334444 46789999995 578999999999999999999999 999999988999999999999999999999998654


Q ss_pred             CcccHHHHHHHHHHH-hCCCceEEEeCCCCHHHHHHHHHhcccCCEEEEEccCCCCccccc---hHhhhcCcEEEeeccc
Q 017868          237 NLQDIAEEVEKIQKA-MGTGIDVSFDCAGLNKTMSTALGATCAGGKVCLVGMGHHEMTVPL---TPAAVREVDVVGVFRY  312 (365)
Q Consensus       237 ~~~~~~~~i~~~~~~-~~~~~d~vid~~g~~~~~~~~~~~l~~~G~~~~~g~~~~~~~~~~---~~~~~~~~~i~~~~~~  312 (365)
                        .+..+..+++.+. .+.++|+||||+|.+..++.++++++++|+++.+|........+.   ..+..|++++.|++.+
T Consensus        83 --~~~~~~~~~i~~~~~~~g~Dvvid~vG~~~~~~~a~~~l~~~G~iv~~G~~~~~~~~~~~~~~~l~~k~l~i~G~~~~  160 (182)
T d1vj0a2          83 --TSVEERRKAIMDITHGRGADFILEATGDSRALLEGSELLRRGGFYSVAGVAVPQDPVPFKVYEWLVLKNATFKGIWVS  160 (182)
T ss_dssp             --SCHHHHHHHHHHHTTTSCEEEEEECSSCTTHHHHHHHHEEEEEEEEECCCCSCCCCEEECHHHHTTTTTCEEEECCCC
T ss_pred             --cchHHHHHHHHHhhCCCCceEEeecCCchhHHHHHHHHhcCCCEEEEEeecCCCCccccccHHHHHHCCcEEEEEEeC
Confidence              4444444433332 367899999999988889999999999999999986544333322   2367899999999887


Q ss_pred             -CCcHHHHHHHHHcC
Q 017868          313 -KNTWPLCLELLRSG  326 (365)
Q Consensus       313 -~~~~~~~~~~l~~g  326 (365)
                       ..++++++++++++
T Consensus       161 ~~~~~~~~~~~i~~~  175 (182)
T d1vj0a2         161 DTSHFVKTVSITSRN  175 (182)
T ss_dssp             CHHHHHHHHHHHHTC
T ss_pred             CHHHHHHHHHHHHHC
Confidence             56789999998875

>d1rjwa2 c.2.1.1 (A:138-305) Alcohol dehydrogenase {Bacillus stearothermophilus [TaxId: 1422]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Alcohol dehydrogenase-like, C-terminal domain
domain: Alcohol dehydrogenase
species: Bacillus stearothermophilus [TaxId: 1422]

Probab=99.90  E-value=5.6e-23  Score=165.92  Aligned_cols=165  Identities=26%  Similarity=0.388  Sum_probs=144.1

Q ss_pred             CCcchhccch-hhHHHHHHHHhcCCCCCCEEEEEcCCHHHHHHHHHHHHHCCCCeEEEEeCChhHHHHHHHcCCCEEEeC
Q 017868          156 VSLEEGAMCE-PLSVGLHACRRANIGPETNVLIMGAGPIGLVTMLGAPRAFGAPRIVIVDVDDYRLSVAKEIGADNIVKV  234 (365)
Q Consensus       156 ~~~~~a~~~~-~~~~a~~~~~~~~~~~g~~vlI~G~g~~G~~ai~~l~~~~g~~~vi~v~~~~~~~~~~~~~g~~~~~~~  234 (365)
                      +|+++||.++ ...|||++++..++++|++|||+|+|++|+++++ +++..|+ +|++++++++|.++++++|++.++++
T Consensus         1 ls~eeAA~l~~~~~Ta~~al~~~~~~~g~~vlv~G~G~iG~~a~~-~a~~~g~-~v~~~~~~~~r~~~~k~~Ga~~~~~~   78 (168)
T d1rjwa2           1 LSFEEAAPIFCAGVTTYKALKVTGAKPGEWVAIYGIGGLGHVAVQ-YAKAMGL-NVVAVDIGDEKLELAKELGADLVVNP   78 (168)
T ss_dssp             SCHHHHGGGGTHHHHHHHHHHHHTCCTTCEEEEECCSTTHHHHHH-HHHHTTC-EEEEECSCHHHHHHHHHTTCSEEECT
T ss_pred             CCHHHHHHHHHHHHHHHHHHHHhCCCCCCEEEEeecccchhhhhH-HHhcCCC-eEeccCCCHHHhhhhhhcCcceeccc
Confidence            5789999887 6778999999999999999999999999999999 8899999 68889999999999999999999885


Q ss_pred             CCCcccHHHHHHHHHHHhCCCceEEEeCCCCHHHHHHHHHhcccCCEEEEEccCCCCccccchHhhhcCcEEEeeccc-C
Q 017868          235 STNLQDIAEEVEKIQKAMGTGIDVSFDCAGLNKTMSTALGATCAGGKVCLVGMGHHEMTVPLTPAAVREVDVVGVFRY-K  313 (365)
Q Consensus       235 ~~~~~~~~~~i~~~~~~~~~~~d~vid~~g~~~~~~~~~~~l~~~G~~~~~g~~~~~~~~~~~~~~~~~~~i~~~~~~-~  313 (365)
                      .+  +++...+++.+    .+.+.+++++++...+..++++++++|+++.+|....+..++...++.+++++.+++.+ .
T Consensus        79 ~~--~~~~~~~~~~~----~~~~~~v~~~~~~~~~~~a~~~l~~~G~i~~~g~~~~~~~~~~~~~~~~~~~i~gs~~~~~  152 (168)
T d1rjwa2          79 LK--EDAAKFMKEKV----GGVHAAVVTAVSKPAFQSAYNSIRRGGACVLVGLPPEEMPIPIFDTVLNGIKIIGSIVGTR  152 (168)
T ss_dssp             TT--SCHHHHHHHHH----SSEEEEEESSCCHHHHHHHHHHEEEEEEEEECCCCSSEEEEEHHHHHHTTCEEEECCSCCH
T ss_pred             cc--chhhhhccccc----CCCceEEeecCCHHHHHHHHHHhccCCceEecccccCCCCCCHHHHHHCCcEEEEEeeCCH
Confidence            43  67777777654    35555666677788999999999999999999988777788888899999999999865 6


Q ss_pred             CcHHHHHHHHHcCCC
Q 017868          314 NTWPLCLELLRSGKI  328 (365)
Q Consensus       314 ~~~~~~~~~l~~g~~  328 (365)
                      ++++++++++++|++
T Consensus       153 ~~~~~~l~l~~~Gki  167 (168)
T d1rjwa2         153 KDLQEALQFAAEGKV  167 (168)
T ss_dssp             HHHHHHHHHHHTTSC
T ss_pred             HHHHHHHHHHHhCCC
Confidence            789999999999987

>d1gu7a1 b.35.1.2 (A:23-160,A:350-386) 2,4-dienoyl-CoA reductase {Yeast (Candida tropicalis) [TaxId: 5482]}

class: All beta proteins
fold: GroES-like
superfamily: GroES-like
family: Alcohol dehydrogenase-like, N-terminal domain
domain: 2,4-dienoyl-CoA reductase
species: Yeast (Candida tropicalis) [TaxId: 5482]

Probab=99.90  E-value=2.7e-26  Score=186.98  Aligned_cols=157  Identities=17%  Similarity=0.124  Sum_probs=127.0

Q ss_pred             hhcceeEEEecCC------ceEEEEecCCCCCCCcEEEEEeeeeeCcccHhhhhccccCC-------ccCCCCcccCccc
Q 017868           15 EEVNMAAWLLGVN------TLKIQPFELPSLGPYDVLVRMKAVGICGSDVHYLKTLRCAD-------FVVKEPMVIGHEC   81 (365)
Q Consensus        15 ~~~~~~~~~~~~~------~l~~~~~~~p~~~~~eVlI~v~~~~l~~~D~~~~~g~~~~~-------~~~~~p~~~G~e~   81 (365)
                      |.++||+++.+.+      +++..++|.|+|+++||||||.++++|++|++.++|.....       .....|.++|+|+
T Consensus         1 m~t~kA~v~~~~G~p~~~l~l~~~~~p~p~~~~~eVlVkv~a~~i~~~D~~~~~G~~~~~~~~~~~~~~~~~~~v~G~e~   80 (175)
T d1gu7a1           1 MITAQAVLYTQHGEPKDVLFTQSFEIDDDNLAPNEVIVKTLGSPVNPSDINQIQGVYPSKPAKTTGFGTTEPAAPCGNEG   80 (175)
T ss_dssp             CEEEEEEEESSCSCHHHHCEEEEEEECTTSCCTTEEEEEEEEEEECHHHHHHHHTCSSCCCCCBSTTCCSSCBEECCSCC
T ss_pred             CceeEEEEEccCCCcccccEEEEEECCCCCCCcCEEEEEEEEeccCcceeEEEecCcccccccccccCCCCCCccccccc
Confidence            5689999998643      24556788888999999999999999999999998864322       1135678999999


Q ss_pred             eEEEEEeCCCCCCCCCCCEEEEcCCcCCCCCccccCCCCCCCCCccccccCCCCcceeeEEeecCCceEECCCCCCcchh
Q 017868           82 AGVIEKVGSEVKTLVPGDRVALEPGISCWRCDHCKGGRYNLCPEMKFFATPPVHGSLANQVVHPADLCFKLPDNVSLEEG  161 (365)
Q Consensus        82 ~G~V~~vG~~v~~~~~Gd~V~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~v~~~~~~~iP~~~~~~~a  161 (365)
                      +|+|+++|.+++.++.||+|.....                           ..|+|+||+.+++++++++|++++.+.+
T Consensus        81 ~g~V~~~~~~~~~~~~g~~v~~~~~---------------------------~~g~~aey~~v~~~~~~~iP~~~~~~~a  133 (175)
T d1gu7a1          81 LFEVIKVGSNVSSLEAGDWVIPSHV---------------------------NFGTWRTHALGNDDDFIKLPNPAQSKAN  133 (175)
T ss_dssp             EEEEEEECTTCCSCCTTCEEEESSS---------------------------CCCCSBSEEEEEGGGEEEECCHHHHHHT
T ss_pred             ccccccccccccccccccceecccc---------------------------ccccccceeeehhhhccCCCccchhhhh
Confidence            9999999999999999999987532                           4589999999999999999998876665


Q ss_pred             ccchhhHHHHHHHH--hcCCCCCCEEEEEc-C-CHHHHHHHH
Q 017868          162 AMCEPLSVGLHACR--RANIGPETNVLIMG-A-GPIGLVTML  199 (365)
Q Consensus       162 ~~~~~~~~a~~~~~--~~~~~~g~~vlI~G-~-g~~G~~ai~  199 (365)
                      +.+ ...|||+++.  ..++++|++|||.| + |++|++++|
T Consensus       134 ~~~-~~~ta~~~l~~~~~~~~~g~~vli~gaa~~gvG~~~iQ  174 (175)
T d1gu7a1         134 GKP-NGLTDAKSIETLYDGTKPLHELYQDGVANSKDGKQLIT  174 (175)
T ss_dssp             TCS-CCCCCCCCEEEECCSSSCHHHHHHHHHHTGGGSCEEEE
T ss_pred             ccc-hHHHHHHHHHHHhcCCCCCCEEEEECccchhhhheEEe
Confidence            544 4446776663  46799999999996 4 679998776

>d2fzwa2 c.2.1.1 (A:163-338) Alcohol dehydrogenase {Human (Homo sapiens), different isozymes [TaxId: 9606]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Alcohol dehydrogenase-like, C-terminal domain
domain: Alcohol dehydrogenase
species: Human (Homo sapiens), different isozymes [TaxId: 9606]

Probab=99.90  E-value=1.1e-22  Score=165.41  Aligned_cols=167  Identities=26%  Similarity=0.311  Sum_probs=134.6

Q ss_pred             Ccchhccch-hhHHHHHHH-HhcCCCCCCEEEEEcCCHHHHHHHHHHHHHCCCCeEEEEeCChhHHHHHHHcCCCEEEeC
Q 017868          157 SLEEGAMCE-PLSVGLHAC-RRANIGPETNVLIMGAGPIGLVTMLGAPRAFGAPRIVIVDVDDYRLSVAKEIGADNIVKV  234 (365)
Q Consensus       157 ~~~~a~~~~-~~~~a~~~~-~~~~~~~g~~vlI~G~g~~G~~ai~~l~~~~g~~~vi~v~~~~~~~~~~~~~g~~~~~~~  234 (365)
                      |+++||.+. ...|+|+++ +.+++++|++|||+|+|++|++++| +++.+|+++|++++++++|+++++++|+++++++
T Consensus         2 P~e~aa~l~ca~~Tay~al~~~~~~~~G~tVlI~GaGGvG~~aiq-~ak~~G~~~vi~~~~~~~k~~~ak~lGa~~~i~~   80 (176)
T d2fzwa2           2 PLDKVCLLGCGISTGYGAAVNTAKLEPGSVCAVFGLGGVGLAVIM-GCKVAGASRIIGVDINKDKFARAKEFGATECINP   80 (176)
T ss_dssp             CHHHHGGGGTHHHHHHHHHHTTTCCCTTCEEEEECCSHHHHHHHH-HHHHHTCSEEEEECSCGGGHHHHHHHTCSEEECG
T ss_pred             CHHHHhHhhcHHHHHHHHHHHhhCCCCCCEEEEecchhHHHHHHH-HHHHHhcCceEEEcccHHHHHHHHHhCCcEEEeC
Confidence            577888887 678999998 5689999999999999999999999 9999999999999999999999999999999987


Q ss_pred             CCCcccHHHHHHHHHHHhCCCceEEEeCCCCHHHHHHHHHhcccCCEEEEEccCC--CCccccchHhhhcCcEEEeeccc
Q 017868          235 STNLQDIAEEVEKIQKAMGTGIDVSFDCAGLNKTMSTALGATCAGGKVCLVGMGH--HEMTVPLTPAAVREVDVVGVFRY  312 (365)
Q Consensus       235 ~~~~~~~~~~i~~~~~~~~~~~d~vid~~g~~~~~~~~~~~l~~~G~~~~~g~~~--~~~~~~~~~~~~~~~~i~~~~~~  312 (365)
                      ....++..+.++..   .++++|+|||++|.......+..++++++..+.++...  .....+......++.++.|++..
T Consensus        81 ~~~~~~~~~~~~~~---~~~g~D~vid~~G~~~~~~~~~~~~~~g~~~~~v~~~~~~~~~~~~~~~~~~~~~~i~Gs~~G  157 (176)
T d2fzwa2          81 QDFSKPIQEVLIEM---TDGGVDYSFECIGNVKVMRAALEACHKGWGVSVVVGVAASGEEIATRPFQLVTGRTWKGTAFG  157 (176)
T ss_dssp             GGCSSCHHHHHHHH---TTSCBSEEEECSCCHHHHHHHHHTBCTTTCEEEECSCCCTTCCEEECTHHHHTTCEEEECSGG
T ss_pred             CchhhHHHHHHHHH---cCCCCcEeeecCCCHHHHHHHHHhhcCCceeEEEEeeccccccccccHHHHHCCCEEEEEeee
Confidence            65545555544443   46899999999999888889999999998887765322  22233344456788999998754


Q ss_pred             ----CCcHHHHHHHHHcCC
Q 017868          313 ----KNTWPLCLELLRSGK  327 (365)
Q Consensus       313 ----~~~~~~~~~~l~~g~  327 (365)
                          .+++.++++++++|+
T Consensus       158 ~~~~~~d~~~li~l~~~GK  176 (176)
T d2fzwa2         158 GWKSVESVPKLVSEYMSKK  176 (176)
T ss_dssp             GCCHHHHHHHHHHHHHTTS
T ss_pred             CCcHHHHHHHHHHHHHcCC
Confidence                345777888888875

>d1tt7a1 b.35.1.2 (A:2-127,A:295-330) Hypothetical protein YhfP {Bacillus subtilis [TaxId: 1423]}

class: All beta proteins
fold: GroES-like
superfamily: GroES-like
family: Alcohol dehydrogenase-like, N-terminal domain
domain: Hypothetical protein YhfP
species: Bacillus subtilis [TaxId: 1423]

Probab=99.90  E-value=8.2e-26  Score=180.87  Aligned_cols=149  Identities=20%  Similarity=0.190  Sum_probs=119.5

Q ss_pred             hcceeEEEecC---CceEEEEecCCCCCCCcEEEEEeeeeeCcccHhhhhccccCCccCCCCcccCccceEEEEEeCCCC
Q 017868           16 EVNMAAWLLGV---NTLKIQPFELPSLGPYDVLVRMKAVGICGSDVHYLKTLRCADFVVKEPMVIGHECAGVIEKVGSEV   92 (365)
Q Consensus        16 ~~~~~~~~~~~---~~l~~~~~~~p~~~~~eVlI~v~~~~l~~~D~~~~~g~~~~~~~~~~p~~~G~e~~G~V~~vG~~v   92 (365)
                      .+|||+++.++   ..+++++++.|++++|||||||+|+++|++|++.+.|...  .....|.++|+|++|+|++  +.+
T Consensus         2 ~~~ka~~~~~~g~~~~l~~~~v~~p~l~~~eVLVkV~a~gin~~D~~~~~g~~~--~~~~~~~~~g~e~~G~v~~--~~~   77 (162)
T d1tt7a1           2 TLFQALQAEKNADDVSVHVKTISTEDLPKDGVLIKVAYSGINYKDGLAGKAGGN--IVREYPLILGIDAAGTVVS--SND   77 (162)
T ss_dssp             CEEEEEEECCGGGSCCCEEEEEESSSSCSSSEEEEECCEEECHHHHHHTSTTCT--TCSSCSEECCSEEEEEEEE--CSS
T ss_pred             CcEEEEEEEecCCCeEEEEEEcCCCCCCCCEEEEEEEEecccchhhheeeeccc--ccccceeeeeeeccccccc--ccc
Confidence            46889998854   5699999999999999999999999999999998887543  2246688999999999998  566


Q ss_pred             CCCCCCCEEEEcCCcCCCCCccccCCCCCCCCCccccccCCCCcceeeEEeecCCceEECCCCCCcchhccch-hhHHHH
Q 017868           93 KTLVPGDRVALEPGISCWRCDHCKGGRYNLCPEMKFFATPPVHGSLANQVVHPADLCFKLPDNVSLEEGAMCE-PLSVGL  171 (365)
Q Consensus        93 ~~~~~Gd~V~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~v~~~~~~~iP~~~~~~~a~~~~-~~~~a~  171 (365)
                      +++++||+|+......                      ....+|+|+||+.+++++++++|+++++++|+.++ ...|||
T Consensus        78 ~~~~~g~~v~~~~~~~----------------------g~~~~G~~aey~~v~~~~l~~iP~~ls~~~Aa~~~~~~~ta~  135 (162)
T d1tt7a1          78 PRFAEGDEVIATSYEL----------------------GVSRDGGLSEYASVPGDWLVPLPQNLSLKEAMVDQLLTIVDR  135 (162)
T ss_dssp             TTCCTTCEEEEESTTB----------------------TTTBCCSSBSSEEECGGGEEECCTTCCHHHHHHSCSTTSEEE
T ss_pred             cccccceeeEeeeccc----------------------eeccccccceEEEecHHHEEECCCCCCHHHHHHHHHHHHHHH
Confidence            7899999998753211                      12356999999999999999999999999999887 555677


Q ss_pred             HHHHhcCCCCCCEEEEEcC
Q 017868          172 HACRRANIGPETNVLIMGA  190 (365)
Q Consensus       172 ~~~~~~~~~~g~~vlI~G~  190 (365)
                      .++...+...+++|||+|+
T Consensus       136 ~~~~~~~~~~~~~Vli~ga  154 (162)
T d1tt7a1         136 EVSLEETPGALKDILQNRI  154 (162)
T ss_dssp             EECSTTHHHHHHHTTTTCC
T ss_pred             HHHHhcCCCCCCEEEEECC
Confidence            6553333445567777765

>d1pqwa_ c.2.1.1 (A:) Putative enoyl reductase domain of polyketide synthase {Mycobacterium tuberculosis [TaxId: 1773]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Alcohol dehydrogenase-like, C-terminal domain
domain: Putative enoyl reductase domain of polyketide synthase
species: Mycobacterium tuberculosis [TaxId: 1773]

Probab=99.89  E-value=7.6e-23  Score=167.52  Aligned_cols=167  Identities=20%  Similarity=0.292  Sum_probs=133.8

Q ss_pred             chhccch-hhHHHHHHH-HhcCCCCCCEEEEEcC-CHHHHHHHHHHHHHCCCCeEEEEeCChhHHHHHHHcCCCEEEeCC
Q 017868          159 EEGAMCE-PLSVGLHAC-RRANIGPETNVLIMGA-GPIGLVTMLGAPRAFGAPRIVIVDVDDYRLSVAKEIGADNIVKVS  235 (365)
Q Consensus       159 ~~a~~~~-~~~~a~~~~-~~~~~~~g~~vlI~G~-g~~G~~ai~~l~~~~g~~~vi~v~~~~~~~~~~~~~g~~~~~~~~  235 (365)
                      ++||+++ ++.|||+++ +.+++++|++|||+|+ |++|++++| +++..|+ .++++.+++++.++++++|++++++++
T Consensus         1 eeAA~l~~~~~TA~~al~~~~~~~~g~~VlI~ga~g~vG~~~iq-la~~~g~-~vi~~~~~~~~~~~l~~~Ga~~vi~~~   78 (183)
T d1pqwa_           1 NEAATFGVAYLTAWHSLCEVGRLSPGERVLIHSATGGVGMAAVS-IAKMIGA-RIYTTAGSDAKREMLSRLGVEYVGDSR   78 (183)
T ss_dssp             CHHHHHHHHHHHHHHHHHTTSCCCTTCEEEETTTTSHHHHHHHH-HHHHHTC-EEEEEESSHHHHHHHHTTCCSEEEETT
T ss_pred             CchhhhhHHHHHHHHHHHHHhCCCCCCEEEEECCCCCcccccch-hhccccc-cceeeecccccccccccccccccccCC
Confidence            4677777 889999998 5678999999999986 999999999 9999999 566666788999999999999998854


Q ss_pred             CCcccHHHHHHHHHHHhCCCceEEEeCCCCHHHHHHHHHhcccCCEEEEEccCCCCcc-ccchHhhhcCcEEEeeccc--
Q 017868          236 TNLQDIAEEVEKIQKAMGTGIDVSFDCAGLNKTMSTALGATCAGGKVCLVGMGHHEMT-VPLTPAAVREVDVVGVFRY--  312 (365)
Q Consensus       236 ~~~~~~~~~i~~~~~~~~~~~d~vid~~g~~~~~~~~~~~l~~~G~~~~~g~~~~~~~-~~~~~~~~~~~~i~~~~~~--  312 (365)
                        ++++.+.+++.+.  +.++|++||++|+ ..++.++++|+++|+++.+|....... ........++.++.+....  
T Consensus        79 --~~~~~~~v~~~t~--~~g~d~v~d~~g~-~~~~~~~~~l~~~G~~v~~G~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  153 (183)
T d1pqwa_          79 --SVDFADEILELTD--GYGVDVVLNSLAG-EAIQRGVQILAPGGRFIELGKKDVYADASLGLAALAKSASFSVVDLDLN  153 (183)
T ss_dssp             --CSTHHHHHHHHTT--TCCEEEEEECCCT-HHHHHHHHTEEEEEEEEECSCGGGTTTCEEEGGGGTTTCEEEECCHHHH
T ss_pred             --ccCHHHHHHHHhC--CCCEEEEEecccc-hHHHHHHHHhcCCCEEEEEccCCCCCCcccchHHHhCCcEEEEEEccce
Confidence              4788888887754  7899999999997 488999999999999999985433222 2222334677887776421  


Q ss_pred             --------CCcHHHHHHHHHcCCCCCCC
Q 017868          313 --------KNTWPLCLELLRSGKIDVKP  332 (365)
Q Consensus       313 --------~~~~~~~~~~l~~g~~~~~~  332 (365)
                              .+.++++++++++|++++.|
T Consensus       154 ~~~~~~~~~~~~~~v~~~i~~G~i~p~P  181 (183)
T d1pqwa_         154 LKLQPARYRQLLQHILQHVADGKLEVLP  181 (183)
T ss_dssp             HHHCHHHHHHHHHHHHHHHHTTSSCCCC
T ss_pred             eccCHHHHHHHHHHHHHHHHCCCCceeC
Confidence                    35688899999999995443

>d1piwa2 c.2.1.1 (A:153-320) Cinnamyl alcohol dehydrogenase, ADH6 {Baker's yeast (Saccharomyces cerevisiae) [TaxId: 4932]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Alcohol dehydrogenase-like, C-terminal domain
domain: Cinnamyl alcohol dehydrogenase, ADH6
species: Baker's yeast (Saccharomyces cerevisiae) [TaxId: 4932]

Probab=99.89  E-value=2.8e-23  Score=167.44  Aligned_cols=162  Identities=20%  Similarity=0.218  Sum_probs=136.5

Q ss_pred             Ccchhccch-hhHHHHHHHHhcCCCCCCEEEEEcCCHHHHHHHHHHHHHCCCCeEEEEeCChhHHHHHHHcCCCEEEeCC
Q 017868          157 SLEEGAMCE-PLSVGLHACRRANIGPETNVLIMGAGPIGLVTMLGAPRAFGAPRIVIVDVDDYRLSVAKEIGADNIVKVS  235 (365)
Q Consensus       157 ~~~~a~~~~-~~~~a~~~~~~~~~~~g~~vlI~G~g~~G~~ai~~l~~~~g~~~vi~v~~~~~~~~~~~~~g~~~~~~~~  235 (365)
                      |++.||.+. ...|||+++++.++++|++|||+|+|++|++++| +++.+|+ ++++++++++|.++++++|+++++++.
T Consensus         2 p~e~AApl~cag~Ta~~al~~~~~~~g~~vlI~GaG~vG~~a~q-~ak~~G~-~vi~~~~~~~k~~~a~~lGa~~~i~~~   79 (168)
T d1piwa2           2 PSHLAAPLLCGGLTVYSPLVRNGCGPGKKVGIVGLGGIGSMGTL-ISKAMGA-ETYVISRSSRKREDAMKMGADHYIATL   79 (168)
T ss_dssp             CHHHHGGGGTHHHHHHHHHHHTTCSTTCEEEEECCSHHHHHHHH-HHHHHTC-EEEEEESSSTTHHHHHHHTCSEEEEGG
T ss_pred             CHHHHHHHHHHHHHHHHHHHHhCcCCCCEEEEECCCCcchhHHH-Hhhhccc-cccccccchhHHHHhhccCCcEEeecc
Confidence            456677665 5678999999999999999999999999999999 9999999 578889999999999999999998864


Q ss_pred             CCcccHHHHHHHHHHHhCCCceEEEeCCCCHH--HHHHHHHhcccCCEEEEEccCCCCccccchHhhhcCcEEEeeccc-
Q 017868          236 TNLQDIAEEVEKIQKAMGTGIDVSFDCAGLNK--TMSTALGATCAGGKVCLVGMGHHEMTVPLTPAAVREVDVVGVFRY-  312 (365)
Q Consensus       236 ~~~~~~~~~i~~~~~~~~~~~d~vid~~g~~~--~~~~~~~~l~~~G~~~~~g~~~~~~~~~~~~~~~~~~~i~~~~~~-  312 (365)
                      +. .++.+       ....++|.++||++...  .+..++++++++|+++.+|.......++...+..+++++.|++.. 
T Consensus        80 ~~-~~~~~-------~~~~~~d~vi~~~~~~~~~~~~~~~~~l~~~G~iv~~G~~~~~~~~~~~~~~~k~~~i~Gs~~g~  151 (168)
T d1piwa2          80 EE-GDWGE-------KYFDTFDLIVVCASSLTDIDFNIMPKAMKVGGRIVSISIPEQHEMLSLKPYGLKAVSISYSALGS  151 (168)
T ss_dssp             GT-SCHHH-------HSCSCEEEEEECCSCSTTCCTTTGGGGEEEEEEEEECCCCCSSCCEEECGGGCBSCEEEECCCCC
T ss_pred             ch-HHHHH-------hhhcccceEEEEecCCccchHHHHHHHhhccceEEEeccccccccccHHHHHhCCcEEEEEeeCC
Confidence            32 23322       12578999999988542  356789999999999999987777788888899999999998765 


Q ss_pred             CCcHHHHHHHHHcCCC
Q 017868          313 KNTWPLCLELLRSGKI  328 (365)
Q Consensus       313 ~~~~~~~~~~l~~g~~  328 (365)
                      .++++++++++++|++
T Consensus       152 ~~~~~e~l~li~~gkI  167 (168)
T d1piwa2         152 IKELNQLLKLVSEKDI  167 (168)
T ss_dssp             HHHHHHHHHHHHHTTC
T ss_pred             HHHHHHHHHHHHhCCC
Confidence            6789999999999987

>d1xa0a2 c.2.1.1 (A:119-294) B. subtilis YhfP homologue {Bacillus stearothermophilus [TaxId: 1422]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Alcohol dehydrogenase-like, C-terminal domain
domain: B. subtilis YhfP homologue
species: Bacillus stearothermophilus [TaxId: 1422]

Probab=99.89  E-value=1.2e-22  Score=163.52  Aligned_cols=163  Identities=18%  Similarity=0.217  Sum_probs=129.0

Q ss_pred             CCcchhccch-hhHHHHHHHH----hcCCCCCCEEEEEcC-CHHHHHHHHHHHHHCCCCeEEEEeCChhHHHHHHHcCCC
Q 017868          156 VSLEEGAMCE-PLSVGLHACR----RANIGPETNVLIMGA-GPIGLVTMLGAPRAFGAPRIVIVDVDDYRLSVAKEIGAD  229 (365)
Q Consensus       156 ~~~~~a~~~~-~~~~a~~~~~----~~~~~~g~~vlI~G~-g~~G~~ai~~l~~~~g~~~vi~v~~~~~~~~~~~~~g~~  229 (365)
                      +|+++||.++ +..|||++++    .++.++|++|||+|+ |++|.+++| +++..|+ +|+++.++++|.++++++|++
T Consensus         1 lS~~eAAal~~aglTA~~a~~~L~~~g~~~~g~~VLI~gaaGGVG~~aiQ-lak~~Ga-~Viat~~s~~k~~~~~~lGa~   78 (176)
T d1xa0a2           1 LTLKEAMAIGTAGFTAALSIHRLEEHGLTPERGPVLVTGATGGVGSLAVS-MLAKRGY-TVEASTGKAAEHDYLRVLGAK   78 (176)
T ss_dssp             CCHHHHHHHHHHHHHHHHHHHHHHHTTCCGGGCCEEESSTTSHHHHHHHH-HHHHTTC-CEEEEESCTTCHHHHHHTTCS
T ss_pred             CCHHHHHHhhhHHHHHHHHHHHHHHhCCCCCCCEEEEEeccchHHHHHHH-HHHHcCC-ceEEecCchHHHHHHHhcccc
Confidence            5899999998 7789997753    477889999999986 999999999 9999999 577788999999999999999


Q ss_pred             EEEeCCCCcccHHHHHHHHHHHhCCCceEEEeCCCCHHHHHHHHHhcccCCEEEEEccC-CCCccccchHhhhcCcEEEe
Q 017868          230 NIVKVSTNLQDIAEEVEKIQKAMGTGIDVSFDCAGLNKTMSTALGATCAGGKVCLVGMG-HHEMTVPLTPAAVREVDVVG  308 (365)
Q Consensus       230 ~~~~~~~~~~~~~~~i~~~~~~~~~~~d~vid~~g~~~~~~~~~~~l~~~G~~~~~g~~-~~~~~~~~~~~~~~~~~i~~  308 (365)
                      ++++++.   .+.+.++   .+.++++|+|||++|+. .+..++++|+++|+++.+|.. .....++...++.|++++.|
T Consensus        79 ~vi~~~~---~~~~~~~---~~~~~gvD~vid~vgg~-~~~~~l~~l~~~Griv~~G~~~g~~~~~~~~~~~~k~~~i~G  151 (176)
T d1xa0a2          79 EVLARED---VMAERIR---PLDKQRWAAAVDPVGGR-TLATVLSRMRYGGAVAVSGLTGGAEVPTTVHPFILRGVSLLG  151 (176)
T ss_dssp             EEEECC---------------CCSCCEEEEEECSTTT-THHHHHHTEEEEEEEEECSCCSSSCCCCCSHHHHHTTCEEEE
T ss_pred             eeeecch---hHHHHHH---HhhccCcCEEEEcCCch-hHHHHHHHhCCCceEEEeecccCcccCCCHHHHHHCCcEEEE
Confidence            9998753   2323322   23478999999999976 899999999999999999965 44557888889999999999


Q ss_pred             ecccC---CcHHHHHHHHHcCCC
Q 017868          309 VFRYK---NTWPLCLELLRSGKI  328 (365)
Q Consensus       309 ~~~~~---~~~~~~~~~l~~g~~  328 (365)
                      .....   +...++++.+ .+.+
T Consensus       152 v~~~~~~~~~~~~~~~~l-ag~l  173 (176)
T d1xa0a2         152 IDSVYCPMDLRLRIWERL-AGDL  173 (176)
T ss_dssp             CCSSSCCHHHHHHHHHHH-HTTT
T ss_pred             EeCCcCCHHHHHHHHHHH-hccc
Confidence            75442   3444555555 3666

>d1v3va2 c.2.1.1 (A:113-294) Leukotriene b4 12-hydroxydehydrogenase/prostaglandin 15-keto reductase {Guinea pig (Cavia porcellus) [TaxId: 10141]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Alcohol dehydrogenase-like, C-terminal domain
domain: Leukotriene b4 12-hydroxydehydrogenase/prostaglandin 15-keto reductase
species: Guinea pig (Cavia porcellus) [TaxId: 10141]

Probab=99.88  E-value=3.1e-22  Score=163.42  Aligned_cols=155  Identities=19%  Similarity=0.219  Sum_probs=125.8

Q ss_pred             hhhHHHHHHHH-hcCCCCCCEEEEEcC-CHHHHHHHHHHHHHCCCCeEEEEeCChhHHHHHHHcCCCEEEeCCCCcccHH
Q 017868          165 EPLSVGLHACR-RANIGPETNVLIMGA-GPIGLVTMLGAPRAFGAPRIVIVDVDDYRLSVAKEIGADNIVKVSTNLQDIA  242 (365)
Q Consensus       165 ~~~~~a~~~~~-~~~~~~g~~vlI~G~-g~~G~~ai~~l~~~~g~~~vi~v~~~~~~~~~~~~~g~~~~~~~~~~~~~~~  242 (365)
                      .+..|||+++. .+++++||+|||+|+ |++|++++| +++..|+ +|+++++++++.++++++|+++++++.  ++++.
T Consensus        12 ~~glTA~~al~~~~~v~~G~~VlV~ga~ggvG~~aiq-lak~~Ga-~vi~~~~~~~~~~~~~~~Ga~~vi~~~--~~~~~   87 (182)
T d1v3va2          12 MPGLTAYFGLLEVCGVKGGETVLVSAAAGAVGSVVGQ-IAKLKGC-KVVGAAGSDEKIAYLKQIGFDAAFNYK--TVNSL   87 (182)
T ss_dssp             HHHHHHHHHHHTTTCCCSSCEEEESSTTSHHHHHHHH-HHHHTTC-EEEEEESSHHHHHHHHHTTCSEEEETT--SCSCH
T ss_pred             hHHHHHHHHHHHHhCCCCCCEEEEEeCCCchhHHHHH-HHHccCC-EEEEeCCCHHHHHHHHhhhhhhhcccc--cccHH
Confidence            47889999995 689999999999987 899999999 9999999 688888999999999999999998854  35666


Q ss_pred             HHHHHHHHHhCCCceEEEeCCCCHHHHHHHHHhcccCCEEEEEccCC-------CCccccchHhhhcCcEEEeeccc---
Q 017868          243 EEVEKIQKAMGTGIDVSFDCAGLNKTMSTALGATCAGGKVCLVGMGH-------HEMTVPLTPAAVREVDVVGVFRY---  312 (365)
Q Consensus       243 ~~i~~~~~~~~~~~d~vid~~g~~~~~~~~~~~l~~~G~~~~~g~~~-------~~~~~~~~~~~~~~~~i~~~~~~---  312 (365)
                      +.+.+.+  .+.++|+|||++|. ..++.++++++++|+++.+|...       ....++...++++++++.+++..   
T Consensus        88 ~~~~~~~--~~~Gvd~v~D~vG~-~~~~~~~~~l~~~G~~v~~G~~~~~~~~~~~~~~~~~~~l~~k~~ti~g~~~~~~~  164 (182)
T d1v3va2          88 EEALKKA--SPDGYDCYFDNVGG-EFLNTVLSQMKDFGKIAICGAISVYNRMDQLPPGPSPESIIYKQLRIEGFIVYRWQ  164 (182)
T ss_dssp             HHHHHHH--CTTCEEEEEESSCH-HHHHHHGGGEEEEEEEEECCCGGGTTCTTSCCBCCCHHHHHHTTCEEEECCGGGCC
T ss_pred             HHHHHHh--hcCCCceeEEecCc-hhhhhhhhhccCCCeEEeecceeeccccccCCCCcchHHHhhcCcEEEEEEEeccC
Confidence            6665543  37899999999995 58999999999999999998421       12234455688999999997643   


Q ss_pred             ----CCcHHHHHHHHHcC
Q 017868          313 ----KNTWPLCLELLRSG  326 (365)
Q Consensus       313 ----~~~~~~~~~~l~~g  326 (365)
                          .+.++++++|+++|
T Consensus       165 ~~~~~~~~~~l~~~i~~G  182 (182)
T d1v3va2         165 GDVREKALRDLMKWVLEG  182 (182)
T ss_dssp             HHHHHHHHHHHHHHHHTT
T ss_pred             hHHHHHHHHHHHHHHhCc
Confidence                23467777777765

>d1gu7a2 c.2.1.1 (A:161-349) 2,4-dienoyl-CoA reductase {Yeast (Candida tropicalis) [TaxId: 5482]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Alcohol dehydrogenase-like, C-terminal domain
domain: 2,4-dienoyl-CoA reductase
species: Yeast (Candida tropicalis) [TaxId: 5482]

Probab=99.88  E-value=1.6e-22  Score=166.04  Aligned_cols=170  Identities=15%  Similarity=0.244  Sum_probs=135.8

Q ss_pred             CCcchhccch-hhHHHHHHHH-hcCCCCCCEEEEE-cC-CHHHHHHHHHHHHHCCCCeEEEEeCC---hhHHHHHHHcCC
Q 017868          156 VSLEEGAMCE-PLSVGLHACR-RANIGPETNVLIM-GA-GPIGLVTMLGAPRAFGAPRIVIVDVD---DYRLSVAKEIGA  228 (365)
Q Consensus       156 ~~~~~a~~~~-~~~~a~~~~~-~~~~~~g~~vlI~-G~-g~~G~~ai~~l~~~~g~~~vi~v~~~---~~~~~~~~~~g~  228 (365)
                      +|+++||+++ .+.|||+++. ..++++|+++||+ |+ |++|++++| +|+.+|++++.++.+.   +++.+.++++|+
T Consensus         1 ls~~~AA~l~~~~~TA~~~l~~~~~~~~g~~vli~~ga~g~vG~~aiq-lAk~~Ga~vI~~v~~~~~~~~~~~~~~~lGa   79 (189)
T d1gu7a2           1 LTINQGATISVNPLTAYLMLTHYVKLTPGKDWFIQNGGTSAVGKYASQ-IGKLLNFNSISVIRDRPNLDEVVASLKELGA   79 (189)
T ss_dssp             CCHHHHHTCTTHHHHHHHHHHSSSCCCTTTCEEEESCTTSHHHHHHHH-HHHHHTCEEEEEECCCTTHHHHHHHHHHHTC
T ss_pred             CCHHHHHHhhhHHHHHHHHHHHHhCCCCCCEEEEEeCCCchHHHHHHH-HHhhcCCeEEEEEecccccchHHhhhhhccc
Confidence            5889999998 8899999995 5889999999997 55 999999999 9999999655555333   345667899999


Q ss_pred             CEEEeCCC-CcccHHHHHHHHHHHhCCCceEEEeCCCCHHHHHHHHHhcccCCEEEEEccC-CCCccccchHhhhcCcEE
Q 017868          229 DNIVKVST-NLQDIAEEVEKIQKAMGTGIDVSFDCAGLNKTMSTALGATCAGGKVCLVGMG-HHEMTVPLTPAAVREVDV  306 (365)
Q Consensus       229 ~~~~~~~~-~~~~~~~~i~~~~~~~~~~~d~vid~~g~~~~~~~~~~~l~~~G~~~~~g~~-~~~~~~~~~~~~~~~~~i  306 (365)
                      +++++++. +..++.+.+++++...++++|++||++|.+ .+..++++|+++|+++.+|.. ..+..++...+.+|++++
T Consensus        80 d~vi~~~~~~~~~~~~~v~~~~~~~g~~vdvv~D~vg~~-~~~~~~~~l~~~G~~v~~G~~~~~~~~~~~~~l~~k~~~i  158 (189)
T d1gu7a2          80 TQVITEDQNNSREFGPTIKEWIKQSGGEAKLALNCVGGK-SSTGIARKLNNNGLMLTYGGMSFQPVTIPTSLYIFKNFTS  158 (189)
T ss_dssp             SEEEEHHHHHCGGGHHHHHHHHHHHTCCEEEEEESSCHH-HHHHHHHTSCTTCEEEECCCCSSCCEEECHHHHHHSCCEE
T ss_pred             cEEEeccccchhHHHHHHHHHHhhccCCceEEEECCCcc-hhhhhhhhhcCCcEEEEECCccCCCccCcHHHHHHCCcEE
Confidence            99998743 345667777877766788999999999965 788999999999999999853 445567778888999999


Q ss_pred             Eeeccc----------CCcHHHHHHHHHcCC
Q 017868          307 VGVFRY----------KNTWPLCLELLRSGK  327 (365)
Q Consensus       307 ~~~~~~----------~~~~~~~~~~l~~g~  327 (365)
                      .|++..          .+.++++++++++|+
T Consensus       159 ~G~~~~~~~~~~~~~~~~~~~~l~~l~~~Gk  189 (189)
T d1gu7a2         159 AGFWVTELLKNNKELKTSTLNQIIAWYEEGK  189 (189)
T ss_dssp             EECCHHHHHTTCHHHHHHHHHHHHHHHHHTC
T ss_pred             EEEEehHhhhhCHHHHHHHHHHHHHHHHcCC
Confidence            997532          235677778877764

>d1iz0a2 c.2.1.1 (A:99-269) Quinone oxidoreductase {Thermus thermophilus [TaxId: 274]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Alcohol dehydrogenase-like, C-terminal domain
domain: Quinone oxidoreductase
species: Thermus thermophilus [TaxId: 274]

Probab=99.88  E-value=2.1e-22  Score=162.54  Aligned_cols=144  Identities=23%  Similarity=0.419  Sum_probs=118.7

Q ss_pred             CCcchhccch-hhHHHHHHHHhcCCCCCCEEEEEcC-CHHHHHHHHHHHHHCCCCeEEEEeCChhHHHHHHHcCCCEEEe
Q 017868          156 VSLEEGAMCE-PLSVGLHACRRANIGPETNVLIMGA-GPIGLVTMLGAPRAFGAPRIVIVDVDDYRLSVAKEIGADNIVK  233 (365)
Q Consensus       156 ~~~~~a~~~~-~~~~a~~~~~~~~~~~g~~vlI~G~-g~~G~~ai~~l~~~~g~~~vi~v~~~~~~~~~~~~~g~~~~~~  233 (365)
                      +++++||.++ ++.|||++++++++++|++|||+|+ |++|++++| +++..|+ +++++++++++.+.++++|++++++
T Consensus         1 ls~eeAA~l~~~~~TA~~al~~~~~~~g~~VlI~ga~G~vG~~aiq-lak~~G~-~vi~~~~~~~~~~~~~~lGa~~~i~   78 (171)
T d1iz0a2           1 LSPEEAAAFPVSFLTAYLALKRAQARPGEKVLVQAAAGALGTAAVQ-VARAMGL-RVLAAASRPEKLALPLALGAEEAAT   78 (171)
T ss_dssp             CCHHHHHTSHHHHHHHHHHHHHTTCCTTCEEEESSTTBHHHHHHHH-HHHHTTC-EEEEEESSGGGSHHHHHTTCSEEEE
T ss_pred             CCHHHHHHHHHHHHHHHHHHHHhCCCCCCEEEEEeccccchhhhhh-hhccccc-ccccccccccccccccccccceeee
Confidence            5789999887 7899999998899999999999986 999999999 9999999 6788888899999999999999987


Q ss_pred             CCCCcccHHHHHHHHHHHhCCCceEEEeCCCCHHHHHHHHHhcccCCEEEEEccCC-CCccccchHhhhcCcEEEeeccc
Q 017868          234 VSTNLQDIAEEVEKIQKAMGTGIDVSFDCAGLNKTMSTALGATCAGGKVCLVGMGH-HEMTVPLTPAAVREVDVVGVFRY  312 (365)
Q Consensus       234 ~~~~~~~~~~~i~~~~~~~~~~~d~vid~~g~~~~~~~~~~~l~~~G~~~~~g~~~-~~~~~~~~~~~~~~~~i~~~~~~  312 (365)
                      +.    +.   ..+.+.  +.++|+|||++|.  .+..++++++++|+++.+|... ....++...++.|++++.+++..
T Consensus        79 ~~----~~---~~~~~~--~~g~D~v~d~~G~--~~~~~~~~l~~~G~~v~~G~~~g~~~~~~~~~~~~k~~~i~g~~~~  147 (171)
T d1iz0a2          79 YA----EV---PERAKA--WGGLDLVLEVRGK--EVEESLGLLAHGGRLVYIGAAEGEVAPIPPLRLMRRNLAVLGFWLT  147 (171)
T ss_dssp             GG----GH---HHHHHH--TTSEEEEEECSCT--THHHHHTTEEEEEEEEEC-------CCCCTTHHHHTTCEEEECCHH
T ss_pred             hh----hh---hhhhhc--cccccccccccch--hHHHHHHHHhcCCcEEEEeCCCCCCCCccHHHHHHCCcEEEEEeCc
Confidence            53    22   233333  7899999999983  6789999999999999998654 34467778889999999998643

>d1cdoa2 c.2.1.1 (A:165-339) Alcohol dehydrogenase {Cod (Gadus callarias) [TaxId: 8053]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Alcohol dehydrogenase-like, C-terminal domain
domain: Alcohol dehydrogenase
species: Cod (Gadus callarias) [TaxId: 8053]

Probab=99.87  E-value=2.7e-21  Score=156.93  Aligned_cols=167  Identities=23%  Similarity=0.330  Sum_probs=135.6

Q ss_pred             Ccchhccch-hhHHHHHHH-HhcCCCCCCEEEEEcCCHHHHHHHHHHHHHCCCCeEEEEeCChhHHHHHHHcCCCEEEeC
Q 017868          157 SLEEGAMCE-PLSVGLHAC-RRANIGPETNVLIMGAGPIGLVTMLGAPRAFGAPRIVIVDVDDYRLSVAKEIGADNIVKV  234 (365)
Q Consensus       157 ~~~~a~~~~-~~~~a~~~~-~~~~~~~g~~vlI~G~g~~G~~ai~~l~~~~g~~~vi~v~~~~~~~~~~~~~g~~~~~~~  234 (365)
                      |+++||.+. .+.|+|+++ +.+++++|++|+|+|+|++|+++++ +++..|..+|++++++++|+++++++|+++++++
T Consensus         2 P~e~aa~l~ca~~Tay~a~~~~a~~k~g~~VlI~G~Gg~g~~~~~-~~~~~g~~~Vi~~~~~~~rl~~a~~~GAd~~in~   80 (175)
T d1cdoa2           2 PLDTVCLLGCGVSTGFGAAVNTAKVEPGSTCAVFGLGAVGLAAVM-GCHSAGAKRIIAVDLNPDKFEKAKVFGATDFVNP   80 (175)
T ss_dssp             CHHHHGGGGTHHHHHHHHHHTTTCCCTTCEEEEECCSHHHHHHHH-HHHHTTCSEEEEECSCGGGHHHHHHTTCCEEECG
T ss_pred             CHHHHHHhhcHHHHHHHHHHHhhCCCCCCEEEEEecCCccchHHH-HHHHHhhchheeecchHHHHHHHHHcCCcEEEcC
Confidence            678888887 788999998 5789999999999999999999999 7788899899999999999999999999999987


Q ss_pred             CCCcccHHHHHHHHHHHhCCCceEEEeCCCCHHHHHHHHHhcccCCEE-EEEccCCCCccccchHhhhcCcEEEeeccc-
Q 017868          235 STNLQDIAEEVEKIQKAMGTGIDVSFDCAGLNKTMSTALGATCAGGKV-CLVGMGHHEMTVPLTPAAVREVDVVGVFRY-  312 (365)
Q Consensus       235 ~~~~~~~~~~i~~~~~~~~~~~d~vid~~g~~~~~~~~~~~l~~~G~~-~~~g~~~~~~~~~~~~~~~~~~~i~~~~~~-  312 (365)
                      ...+ +..+.+++.+.  ++++|++||++|....+..+..++.+++.. +..+........+....+.++.++.|++.. 
T Consensus        81 ~~~~-~~~~~~~~~~~--~~G~d~vid~~G~~~~~~~a~~~~~~g~~~~~~~g~~~~~~~~~~~~~~~~~~~i~Gs~~G~  157 (175)
T d1cdoa2          81 NDHS-EPISQVLSKMT--NGGVDFSLECVGNVGVMRNALESCLKGWGVSVLVGWTDLHDVATRPIQLIAGRTWKGSMFGG  157 (175)
T ss_dssp             GGCS-SCHHHHHHHHH--TSCBSEEEECSCCHHHHHHHHHTBCTTTCEEEECSCCSSSCEEECHHHHHTTCEEEECSGGG
T ss_pred             CCcc-hhHHHHHHhhc--cCCcceeeeecCCHHHHHHHHHHhhCCCcceeEEEecCCcccCccHHHHHCCcEEEEEEEeC
Confidence            5432 33444444433  789999999999988888888887777554 445555555566667778889999998643 


Q ss_pred             ---CCcHHHHHHHHHcCC
Q 017868          313 ---KNTWPLCLELLRSGK  327 (365)
Q Consensus       313 ---~~~~~~~~~~l~~g~  327 (365)
                         .+++.++++++++|+
T Consensus       158 ~~~~~d~~~~i~l~~~gK  175 (175)
T d1cdoa2         158 FKGKDGVPKMVKAYLDKK  175 (175)
T ss_dssp             CCHHHHHHHHHHHHHTTS
T ss_pred             CcHHHHHHHHHHHHHcCC
Confidence               467889999998875

>d2jhfa2 c.2.1.1 (A:164-339) Alcohol dehydrogenase {Horse (Equus caballus) [TaxId: 9796]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Alcohol dehydrogenase-like, C-terminal domain
domain: Alcohol dehydrogenase
species: Horse (Equus caballus) [TaxId: 9796]

Probab=99.87  E-value=2.3e-21  Score=157.44  Aligned_cols=167  Identities=23%  Similarity=0.284  Sum_probs=132.3

Q ss_pred             Ccchhccch-hhHHHHHHH-HhcCCCCCCEEEEEcCCHHHHHHHHHHHHHCCCCeEEEEeCChhHHHHHHHcCCCEEEeC
Q 017868          157 SLEEGAMCE-PLSVGLHAC-RRANIGPETNVLIMGAGPIGLVTMLGAPRAFGAPRIVIVDVDDYRLSVAKEIGADNIVKV  234 (365)
Q Consensus       157 ~~~~a~~~~-~~~~a~~~~-~~~~~~~g~~vlI~G~g~~G~~ai~~l~~~~g~~~vi~v~~~~~~~~~~~~~g~~~~~~~  234 (365)
                      |+++||.++ ...|||+++ +.+++++||+|||+|+|++|+++++ +++..|+.+|++++++++|.++++++|+++++++
T Consensus         2 Ple~aa~l~ca~~Tay~al~~~~~vk~GdtVlV~GaGG~G~~~~~-~~~~~g~~~Vi~~~~~~~k~~~a~~~Ga~~~i~~   80 (176)
T d2jhfa2           2 PLEKVCLIGCGFSTGYGSAVKVAKVTQGSTCAVFGLGGVGLSVIM-GCKAAGAARIIGVDINKDKFAKAKEVGATECVNP   80 (176)
T ss_dssp             CHHHHGGGGTHHHHHHHHHHTTTCCCTTCEEEEECCSHHHHHHHH-HHHHTTCSEEEEECSCGGGHHHHHHTTCSEEECG
T ss_pred             CHHHHhHhhcHHHHHHHHHHHhhCCCCCCEEEEECCCCcHHHHHH-HHHHcCCceEEeecCcHHHHHHHHHhCCeeEEec
Confidence            677888887 678999998 5789999999999999999999999 8888998899999999999999999999999886


Q ss_pred             CCCcccHHHHHHHHHHHhCCCceEEEeCCCCHHHHHHHHHhcccCCEEEEEc-cCCCCc-cccchHhhhcCcEEEeeccc
Q 017868          235 STNLQDIAEEVEKIQKAMGTGIDVSFDCAGLNKTMSTALGATCAGGKVCLVG-MGHHEM-TVPLTPAAVREVDVVGVFRY  312 (365)
Q Consensus       235 ~~~~~~~~~~i~~~~~~~~~~~d~vid~~g~~~~~~~~~~~l~~~G~~~~~g-~~~~~~-~~~~~~~~~~~~~i~~~~~~  312 (365)
                      .+..+.....++ .  +.++++|++||++|.......++..+++++..+.++ ...... .+.......+++++.|++..
T Consensus        81 ~~~~~~~~~~~~-~--~~~~G~D~vid~~G~~~~~~~a~~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~i~Gs~~G  157 (176)
T d2jhfa2          81 QDYKKPIQEVLT-E--MSNGGVDFSFEVIGRLDTMVTALSCCQEAYGVSVIVGVPPDSQNLSMNPMLLLSGRTWKGAIFG  157 (176)
T ss_dssp             GGCSSCHHHHHH-H--HTTSCBSEEEECSCCHHHHHHHHHHBCTTTCEEEECSCCCTTCCEEECTHHHHTTCEEEECSGG
T ss_pred             CCchhHHHHHHH-H--HhcCCCCEEEecCCchhHHHHHHHHHhcCCcceEEecCCCCcccccccHHHHhCCCEEEEEEEe
Confidence            544333333333 2  236899999999999888889999998875555544 333333 33444567799999998753


Q ss_pred             ----CCcHHHHHHHHHcCC
Q 017868          313 ----KNTWPLCLELLRSGK  327 (365)
Q Consensus       313 ----~~~~~~~~~~l~~g~  327 (365)
                          .+++.++++++.+|+
T Consensus       158 ~~~~~~~~~~li~~~~~GK  176 (176)
T d2jhfa2         158 GFKSKDSVPKLVADFMAKK  176 (176)
T ss_dssp             GCCHHHHHHHHHHHHHTTS
T ss_pred             CCCHHHHHHHHHHHHHCcC
Confidence                456778888888775

>d1qora2 c.2.1.1 (A:113-291) Quinone oxidoreductase {Escherichia coli [TaxId: 562]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Alcohol dehydrogenase-like, C-terminal domain
domain: Quinone oxidoreductase
species: Escherichia coli [TaxId: 562]

Probab=99.87  E-value=3.8e-22  Score=162.70  Aligned_cols=128  Identities=22%  Similarity=0.305  Sum_probs=112.8

Q ss_pred             CCcchhccch-hhHHHHHHHH-hcCCCCCCEEEEEcC-CHHHHHHHHHHHHHCCCCeEEEEeCChhHHHHHHHcCCCEEE
Q 017868          156 VSLEEGAMCE-PLSVGLHACR-RANIGPETNVLIMGA-GPIGLVTMLGAPRAFGAPRIVIVDVDDYRLSVAKEIGADNIV  232 (365)
Q Consensus       156 ~~~~~a~~~~-~~~~a~~~~~-~~~~~~g~~vlI~G~-g~~G~~ai~~l~~~~g~~~vi~v~~~~~~~~~~~~~g~~~~~  232 (365)
                      +|+++||.++ ...|||+++. .+++++|++|||+|+ |++|++++| +|+..|+ +|++++++++|.++++++|+++++
T Consensus         1 isfe~AA~~~~~~~TA~~al~~~~~l~~g~~Vlv~ga~g~vG~~~iq-lak~~Ga-~Vi~~~~s~~k~~~~~~lGa~~vi   78 (179)
T d1qora2           1 ISFEQAAASFLKGLTVYYLLRKTYEIKPDEQFLFHAAAGGVGLIACQ-WAKALGA-KLIGTVGTAQKAQSALKAGAWQVI   78 (179)
T ss_dssp             SCHHHHHHHHHHHHHHHHHHHTTSCCCTTCEEEESSTTBHHHHHHHH-HHHHHTC-EEEEEESSHHHHHHHHHHTCSEEE
T ss_pred             CCHHHHHHHHHHHHHHHHHHHHHhCCCCCCEEEEEccccccchHHHH-HHHHhCC-eEeecccchHHHHHHHhcCCeEEE
Confidence            5899999887 7889999995 578999999999976 889999999 9999999 688888999999999999999999


Q ss_pred             eCCCCcccHHHHHHHHHHHhCCCceEEEeCCCCHHHHHHHHHhcccCCEEEEEccCCC
Q 017868          233 KVSTNLQDIAEEVEKIQKAMGTGIDVSFDCAGLNKTMSTALGATCAGGKVCLVGMGHH  290 (365)
Q Consensus       233 ~~~~~~~~~~~~i~~~~~~~~~~~d~vid~~g~~~~~~~~~~~l~~~G~~~~~g~~~~  290 (365)
                      ++..  +++.+.+++++.  +.++|+++|++|.+ .+..++.+++++|+++.++....
T Consensus        79 ~~~~--~d~~~~v~~~t~--g~g~d~v~d~~g~~-~~~~~~~~l~~~G~~v~~g~~~~  131 (179)
T d1qora2          79 NYRE--EDLVERLKEITG--GKKVRVVYDSVGRD-TWERSLDCLQRRGLMVSFGNSSG  131 (179)
T ss_dssp             ETTT--SCHHHHHHHHTT--TCCEEEEEECSCGG-GHHHHHHTEEEEEEEEECCCTTC
T ss_pred             ECCC--CCHHHHHHHHhC--CCCeEEEEeCccHH-HHHHHHHHHhcCCeeeecccccC
Confidence            8644  789999988754  88999999999965 88999999999999999875443

>d1uufa2 c.2.1.1 (A:145-312) Hypothetical protein YahK {Escherichia coli [TaxId: 562]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Alcohol dehydrogenase-like, C-terminal domain
domain: Hypothetical protein YahK
species: Escherichia coli [TaxId: 562]

Probab=99.87  E-value=3.5e-22  Score=160.92  Aligned_cols=162  Identities=18%  Similarity=0.189  Sum_probs=129.1

Q ss_pred             CCcchhccch-hhHHHHHHHHhcCCCCCCEEEEEcCCHHHHHHHHHHHHHCCCCeEEEEeCChhHHHHHHHcCCCEEEeC
Q 017868          156 VSLEEGAMCE-PLSVGLHACRRANIGPETNVLIMGAGPIGLVTMLGAPRAFGAPRIVIVDVDDYRLSVAKEIGADNIVKV  234 (365)
Q Consensus       156 ~~~~~a~~~~-~~~~a~~~~~~~~~~~g~~vlI~G~g~~G~~ai~~l~~~~g~~~vi~v~~~~~~~~~~~~~g~~~~~~~  234 (365)
                      .++..+|.+. ...|+|++++++++++|++|||+|+|++|++++| +++.+|++ +++++++++++++++++|++.++++
T Consensus         4 ~~~a~~Apl~Cag~Tay~al~~~~~~~G~~VlI~GaG~vG~~a~q-lak~~Ga~-~i~~~~~~~~~~~a~~lGad~~i~~   81 (168)
T d1uufa2           4 EQLAAVAPLLCAGITTYSPLRHWQAGPGKKVGVVGIGGLGHMGIK-LAHAMGAH-VVAFTTSEAKREAAKALGADEVVNS   81 (168)
T ss_dssp             GGHHHHGGGGTHHHHHHHHHHHTTCCTTCEEEEECCSHHHHHHHH-HHHHTTCE-EEEEESSGGGHHHHHHHTCSEEEET
T ss_pred             ccHHHHHHHHhHHHHHHHHHHHhCCCCCCEEEEeccchHHHHHHH-Hhhccccc-chhhccchhHHHHHhccCCcEEEEC
Confidence            3445555554 4568999999999999999999999999999999 99999995 5678889999999999999999886


Q ss_pred             CCCcccHHHHHHHHHHHhCCCceEEEeCCCCHHHHHHHHHhcccCCEEEEEccCCCC-ccccchHhhhcCcEEEeeccc-
Q 017868          235 STNLQDIAEEVEKIQKAMGTGIDVSFDCAGLNKTMSTALGATCAGGKVCLVGMGHHE-MTVPLTPAAVREVDVVGVFRY-  312 (365)
Q Consensus       235 ~~~~~~~~~~i~~~~~~~~~~~d~vid~~g~~~~~~~~~~~l~~~G~~~~~g~~~~~-~~~~~~~~~~~~~~i~~~~~~-  312 (365)
                      ..  ++.   .    ....+++|++||++|.+..+..++++++++|+++.+|..... ..++...+..+++++.|++.+ 
T Consensus        82 ~~--~~~---~----~~~~~~~D~vid~~g~~~~~~~~~~~l~~~G~iv~~G~~~~~~~~~~~~~l~~k~~~i~Gs~~~~  152 (168)
T d1uufa2          82 RN--ADE---M----AAHLKSFDFILNTVAAPHNLDDFTTLLKRDGTMTLVGAPATPHKSPEVFNLIMKRRAIAGSMIGG  152 (168)
T ss_dssp             TC--HHH---H----HTTTTCEEEEEECCSSCCCHHHHHTTEEEEEEEEECCCC-------CHHHHHTTTCEEEECCSCC
T ss_pred             ch--hhH---H----HHhcCCCceeeeeeecchhHHHHHHHHhcCCEEEEeccCCCCcccccHHHHHHCCcEEEEEeecC
Confidence            43  221   1    112578999999999877889999999999999999865443 355666788899999999766 


Q ss_pred             CCcHHHHHHHHHcCCC
Q 017868          313 KNTWPLCLELLRSGKI  328 (365)
Q Consensus       313 ~~~~~~~~~~l~~g~~  328 (365)
                      ..+++++++++.+++|
T Consensus       153 ~~d~~e~l~l~a~~~I  168 (168)
T d1uufa2         153 IPETQEMLDFCAEHGI  168 (168)
T ss_dssp             HHHHHHHHHHHHHHTC
T ss_pred             HHHHHHHHHHHHHcCC
Confidence            6778999999987654

>d1d1ta2 c.2.1.1 (A:163-338) Alcohol dehydrogenase {Human (Homo sapiens), different isozymes [TaxId: 9606]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Alcohol dehydrogenase-like, C-terminal domain
domain: Alcohol dehydrogenase
species: Human (Homo sapiens), different isozymes [TaxId: 9606]

Probab=99.87  E-value=7.2e-21  Score=153.86  Aligned_cols=164  Identities=19%  Similarity=0.290  Sum_probs=130.1

Q ss_pred             CCcchhccch-hhHHHHHHH-HhcCCCCCCEEEEEcCCHHHHHHHHHHHHHCCCCeEEEEeCChhHHHHHHHcCCCEEEe
Q 017868          156 VSLEEGAMCE-PLSVGLHAC-RRANIGPETNVLIMGAGPIGLVTMLGAPRAFGAPRIVIVDVDDYRLSVAKEIGADNIVK  233 (365)
Q Consensus       156 ~~~~~a~~~~-~~~~a~~~~-~~~~~~~g~~vlI~G~g~~G~~ai~~l~~~~g~~~vi~v~~~~~~~~~~~~~g~~~~~~  233 (365)
                      .+++.||.+. .+.|+|+++ +.+++++|++|+|+|+|++|++++| +++..|+.+|++++.+++|+++++++|++++++
T Consensus         2 ~P~e~aa~l~Ca~~T~~~Av~~~~~~~~g~tVlI~G~GgvGl~ai~-~ak~~G~~~Vi~vd~~~~kl~~Ak~~GA~~~in   80 (176)
T d1d1ta2           2 APPEKVCLIGCGFSTGYGAAVKTGKVKPGSTCVVFGLGGVGLSVIM-GCKSAGASRIIGIDLNKDKFEKAMAVGATECIS   80 (176)
T ss_dssp             SCHHHHGGGGTHHHHHHHHHHTTSCCCTTCEEEEECCSHHHHHHHH-HHHHTTCSEEEEECSCGGGHHHHHHHTCSEEEC
T ss_pred             cCHHHHHhhhhHHHHHHHHHHHhhCCCCCCEEEEECCCchhHHHHH-HHHHcCCceEEEecCcHHHHHHHHhcCCcEEEC
Confidence            3578899987 788999997 5689999999999999999999999 999999989999999999999999999999998


Q ss_pred             CCCCcccHHHHHHHHHHHhCCCceEEEeCCCCHHHHHHHHHhcccC-CEEEEEccCCCCccccch-HhhhcCcEEEeecc
Q 017868          234 VSTNLQDIAEEVEKIQKAMGTGIDVSFDCAGLNKTMSTALGATCAG-GKVCLVGMGHHEMTVPLT-PAAVREVDVVGVFR  311 (365)
Q Consensus       234 ~~~~~~~~~~~i~~~~~~~~~~~d~vid~~g~~~~~~~~~~~l~~~-G~~~~~g~~~~~~~~~~~-~~~~~~~~i~~~~~  311 (365)
                      +.+. .+....+.+.+  .+.++|++||++|.......++..+.++ |+++.+|........... ...+++.+++|++.
T Consensus        81 ~~~~-~~~~~~~~~~~--~g~G~d~vi~~~g~~~~~~~a~~~~~~~~G~~v~vG~~~~~~~~~~~~~~~~~~~~i~Gs~~  157 (176)
T d1d1ta2          81 PKDS-TKPISEVLSEM--TGNNVGYTFEVIGHLETMIDALASCHMNYGTSVVVGVPPSAKMLTYDPMLLFTGRTWKGCVF  157 (176)
T ss_dssp             GGGC-SSCHHHHHHHH--HTSCCCEEEECSCCHHHHHHHHTTSCTTTCEEEECSCCCTTCCEEECTHHHHTTCEEEECSG
T ss_pred             cccc-chHHHHHHHHh--ccccceEEEEeCCchHHHHHHHHHhhcCCeEEEEEEccccccccCCCHHHHhCCCEEEEEEE
Confidence            6543 23344444443  3789999999999988888888877655 999999976555444333 35667889999875


Q ss_pred             c-C---CcHHHHHHHH
Q 017868          312 Y-K---NTWPLCLELL  323 (365)
Q Consensus       312 ~-~---~~~~~~~~~l  323 (365)
                      . .   +++.++++++
T Consensus       158 G~~~~~~dip~li~~~  173 (176)
T d1d1ta2         158 GGLKSRDDVPKLVTEF  173 (176)
T ss_dssp             GGCCHHHHHHHHHHHH
T ss_pred             eCCCcHHHHHHHHHHH
Confidence            4 2   3444454443

>d1kola2 c.2.1.1 (A:161-355) Formaldehyde dehydrogenase {Pseudomonas putida [TaxId: 303]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Alcohol dehydrogenase-like, C-terminal domain
domain: Formaldehyde dehydrogenase
species: Pseudomonas putida [TaxId: 303]

Probab=99.87  E-value=4.8e-21  Score=157.33  Aligned_cols=161  Identities=19%  Similarity=0.303  Sum_probs=129.1

Q ss_pred             ccchhhHHHHHHHHhcCCCCCCEEEEEcCCHHHHHHHHHHHHHCCCCeEEEEeCChhHHHHHHHcCCCEEEeCCCCcccH
Q 017868          162 AMCEPLSVGLHACRRANIGPETNVLIMGAGPIGLVTMLGAPRAFGAPRIVIVDVDDYRLSVAKEIGADNIVKVSTNLQDI  241 (365)
Q Consensus       162 ~~~~~~~~a~~~~~~~~~~~g~~vlI~G~g~~G~~ai~~l~~~~g~~~vi~v~~~~~~~~~~~~~g~~~~~~~~~~~~~~  241 (365)
                      ++..+++|||++++.+++++|++|||+|+|++|+++++ +++..|+.+|++++.+++|+++++++|+++++++  ..+++
T Consensus         6 ~l~d~~~ta~~a~~~a~v~~G~tVlV~GaG~vGl~a~~-~ak~~ga~~Vi~~d~~~~rl~~a~~~Ga~~~~~~--~~~~~   82 (195)
T d1kola2           6 CLSDILPTGYHGAVTAGVGPGSTVYVAGAGPVGLAAAA-SARLLGAAVVIVGDLNPARLAHAKAQGFEIADLS--LDTPL   82 (195)
T ss_dssp             GGGTHHHHHHHHHHHTTCCTTCEEEEECCSHHHHHHHH-HHHHTTCSEEEEEESCHHHHHHHHHTTCEEEETT--SSSCH
T ss_pred             hcccHHHHHHHHHHHhCCCCCCEEEEECcCHHHHHHHH-HHHhhcccceeeecccchhhHhhhhccccEEEeC--CCcCH
Confidence            33459999999999999999999999999999999999 8999999999999999999999999999988774  44788


Q ss_pred             HHHHHHHHHHhCCCceEEEeCCCC---------------HHHHHHHHHhcccCCEEEEEccCCCCc-------------c
Q 017868          242 AEEVEKIQKAMGTGIDVSFDCAGL---------------NKTMSTALGATCAGGKVCLVGMGHHEM-------------T  293 (365)
Q Consensus       242 ~~~i~~~~~~~~~~~d~vid~~g~---------------~~~~~~~~~~l~~~G~~~~~g~~~~~~-------------~  293 (365)
                      .+.+++++.  +.++|++||++|.               ...++.++++++++|+++.+|......             .
T Consensus        83 ~~~i~~~t~--g~g~D~vid~vG~~~~~~~~~~~~~~~~~~~l~~~~~~~r~gG~v~~~G~~~~~~~~~~~~~~~~~~~~  160 (195)
T d1kola2          83 HEQIAALLG--EPEVDCAVDAVGFEARGHGHEGAKHEAPATVLNSLMQVTRVAGKIGIPGLYVTEDPGAVDAAAKIGSLS  160 (195)
T ss_dssp             HHHHHHHHS--SSCEEEEEECCCTTCBCSSTTGGGSBCTTHHHHHHHHHEEEEEEEEECSCCCSCCTTCSSHHHHTTCCC
T ss_pred             HHHHHHHhC--CCCcEEEEECccccccCCcccceeecCcHHHHHHHHHHHhcCCEEEEeeecCCCcccchhhhhhcCcee
Confidence            888888754  7899999999983               468999999999999999998644322             2


Q ss_pred             ccchHhhhcCcEEEeeccc-CCcHHHHHHHHHcCC
Q 017868          294 VPLTPAAVREVDVVGVFRY-KNTWPLCLELLRSGK  327 (365)
Q Consensus       294 ~~~~~~~~~~~~i~~~~~~-~~~~~~~~~~l~~g~  327 (365)
                      +....++.|++++.+.... .+.++++++++.+++
T Consensus       161 ~~~~~~~~k~~~i~~g~~~v~~~~~~Ll~~I~~~k  195 (195)
T d1kola2         161 IRFGLGWAKSHSFHTGQTPVMKYNRALMQAIMWDR  195 (195)
T ss_dssp             CCHHHHHHTTCEEEESSCCHHHHHHHHHHHHHTTS
T ss_pred             eeHHHHHhhcceeccCCCchHHHHHHHHHHHHcCC
Confidence            2223345677777643222 445677777777653

>d1vj1a2 c.2.1.1 (A:125-311) Putative zinc-binding alcohol dehydrogenase {Mouse (Mus musculus) [TaxId: 10090]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Alcohol dehydrogenase-like, C-terminal domain
domain: Putative zinc-binding alcohol dehydrogenase
species: Mouse (Mus musculus) [TaxId: 10090]

Probab=99.83  E-value=2.7e-20  Score=152.28  Aligned_cols=165  Identities=20%  Similarity=0.246  Sum_probs=122.4

Q ss_pred             CCcchhccchhhHHHHHHH-HhcCCCCC--CEEEEEcC-CHHHHHHHHHHHHHCCCCeEEEEeCChhHH-HHHHHcCCCE
Q 017868          156 VSLEEGAMCEPLSVGLHAC-RRANIGPE--TNVLIMGA-GPIGLVTMLGAPRAFGAPRIVIVDVDDYRL-SVAKEIGADN  230 (365)
Q Consensus       156 ~~~~~a~~~~~~~~a~~~~-~~~~~~~g--~~vlI~G~-g~~G~~ai~~l~~~~g~~~vi~v~~~~~~~-~~~~~~g~~~  230 (365)
                      +|+.+.++-.+..|||+++ +.+++++|  ++|||+|+ |++|++++| +|+.+|+++|+++++++++. ++++++|++.
T Consensus         2 ~~~~~galg~~glTA~~~l~~~~~~~~G~~etVLI~gaaGgVG~~aiQ-lak~~Ga~~vi~~~~~~e~~~~l~~~~gad~   80 (187)
T d1vj1a2           2 LSYFLGAIGMPGLTSLIGVQEKGHISAGSNQTMVVSGAAGACGSLAGQ-IGHLLGCSRVVGICGTQEKCLFLTSELGFDA   80 (187)
T ss_dssp             GGGGGTTTSHHHHHHHHHHHHHSCCCTTSCCEEEESSTTSTTGGGHHH-HHHHTTCSEEEEEESSHHHHHHHHHHSCCSE
T ss_pred             ccHHHHHhhcHHHHHHHHHHHHhCCCCCCCCEEEEECCCchhhHHHHH-HHHHcCCcceecccchHHHHhhhhhcccceE
Confidence            5667765445788999998 56888887  88999986 999999999 99999998888877666554 5667899999


Q ss_pred             EEeCCCCcccHHHHHHHHHHHhCCCceEEEeCCCCHHHHHHHHHhcccCCEEEEEccCCC-----Ccccc-----chHhh
Q 017868          231 IVKVSTNLQDIAEEVEKIQKAMGTGIDVSFDCAGLNKTMSTALGATCAGGKVCLVGMGHH-----EMTVP-----LTPAA  300 (365)
Q Consensus       231 ~~~~~~~~~~~~~~i~~~~~~~~~~~d~vid~~g~~~~~~~~~~~l~~~G~~~~~g~~~~-----~~~~~-----~~~~~  300 (365)
                      ++++..  +++.+.+++..   +.++|+|||++|. ..+..++++++++|+++.+|....     +...+     ...+.
T Consensus        81 vi~~~~--~~~~~~~~~~~---~~GvDvv~D~vGg-~~~~~~~~~l~~~G~iv~~G~~s~~~~~~~~~~~~~~~~~~~~~  154 (187)
T d1vj1a2          81 AVNYKT--GNVAEQLREAC---PGGVDVYFDNVGG-DISNTVISQMNENSHIILCGQISQYNKDVPYPPPLPPAVEAIRK  154 (187)
T ss_dssp             EEETTS--SCHHHHHHHHC---TTCEEEEEESSCH-HHHHHHHTTEEEEEEEEEC------------CCCCCHHHHHHHH
T ss_pred             Eeeccc--hhHHHHHHHHh---ccCceEEEecCCc-hhHHHHhhhccccccEEEeccccccccccccCCchHHHHHHHHH
Confidence            999754  67877777763   5799999999996 488999999999999999985221     11111     11245


Q ss_pred             hcCcEEEeeccc------CCcHHHHHHHHHcCC
Q 017868          301 VREVDVVGVFRY------KNTWPLCLELLRSGK  327 (365)
Q Consensus       301 ~~~~~i~~~~~~------~~~~~~~~~~l~~g~  327 (365)
                      .|++++.++...      .+.++++.+|+++|+
T Consensus       155 ~k~i~~~g~~~~~~~~~~~e~~~~l~~~i~~Gk  187 (187)
T d1vj1a2         155 ERNITRERFTVLNYKDKFEPGILQLSQWFKEGK  187 (187)
T ss_dssp             HTTCEEEECCGGGCGGGHHHHHHHHHHHHHHTS
T ss_pred             hcceEEEEeEecchHHHHHHHHHHHHHHHHCcC
Confidence            688888876432      234566777777764

>d1o89a2 c.2.1.1 (A:116-292) Hypothetical protein YhdH {Escherichia coli [TaxId: 562]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Alcohol dehydrogenase-like, C-terminal domain
domain: Hypothetical protein YhdH
species: Escherichia coli [TaxId: 562]

Probab=99.77  E-value=6.6e-19  Score=141.73  Aligned_cols=145  Identities=16%  Similarity=0.233  Sum_probs=115.9

Q ss_pred             CCcchhccch-hhHHHHHHH---HhcC-CCCCCEEEEEcC-CHHHHHHHHHHHHHCCCCeEEEEeCChhHHHHHHHcCCC
Q 017868          156 VSLEEGAMCE-PLSVGLHAC---RRAN-IGPETNVLIMGA-GPIGLVTMLGAPRAFGAPRIVIVDVDDYRLSVAKEIGAD  229 (365)
Q Consensus       156 ~~~~~a~~~~-~~~~a~~~~---~~~~-~~~g~~vlI~G~-g~~G~~ai~~l~~~~g~~~vi~v~~~~~~~~~~~~~g~~  229 (365)
                      +++.+|+.++ +..|||+++   +..+ ...+++|||+|+ |++|++++| +++.+|+ +|+++.+++++.+.++++|++
T Consensus         1 l~~~~Aa~lg~aGlTA~~a~~~l~~~g~~~~~~~vlV~gasGGVG~~aiQ-lAk~~Ga-~Via~~~~~~k~~~~~~lGad   78 (177)
T d1o89a2           1 LDARKAMIIGTAGFTAMLCVMALEDAGVRPQDGEIVVTGASGGVGSTAVA-LLHKLGY-QVVAVSGRESTHEYLKSLGAS   78 (177)
T ss_dssp             CCHHHHHHHHHHHHHHHHHHHHHHHTTCCGGGCEEEESSTTSHHHHHHHH-HHHHTTC-CEEEEESCGGGHHHHHHHTEE
T ss_pred             CCHHHHHHcccHHHHHHHHHHHHHHhCCCCCCCcEEEEEccccchHHHHH-HHHHcCC-CeEEEecchhHHHHHHhhccc
Confidence            4778899887 667888765   3344 445569999976 999999999 9999999 477888999999999999999


Q ss_pred             EEEeCCCCcccHHHHHHHHHHHhCCCceEEEeCCCCHHHHHHHHHhcccCCEEEEEccCC-CCccccchHhhhcCcEEEe
Q 017868          230 NIVKVSTNLQDIAEEVEKIQKAMGTGIDVSFDCAGLNKTMSTALGATCAGGKVCLVGMGH-HEMTVPLTPAAVREVDVVG  308 (365)
Q Consensus       230 ~~~~~~~~~~~~~~~i~~~~~~~~~~~d~vid~~g~~~~~~~~~~~l~~~G~~~~~g~~~-~~~~~~~~~~~~~~~~i~~  308 (365)
                      +++++++  .++.+.+      .....|.++|++|+. .+...+++++++|+++.+|... .....+...++.|++++.|
T Consensus        79 ~vi~~~~--~~~~~~l------~~~~~~~vvD~Vgg~-~~~~~l~~l~~~Griv~~G~~~~~~~~~~~~~~~~k~~~i~G  149 (177)
T d1o89a2          79 RVLPRDE--FAESRPL------EKQVWAGAIDTVGDK-VLAKVLAQMNYGGCVAACGLAGGFTLPTTVMPFILRNVRLQG  149 (177)
T ss_dssp             EEEEGGG--SSSCCSS------CCCCEEEEEESSCHH-HHHHHHHTEEEEEEEEECCCTTCSCCCCCSHHHHHHCCEEEE
T ss_pred             ccccccc--HHHHHHH------HhhcCCeeEEEcchH-HHHHHHHHhccccceEeecccCCccccccHHHHHHCCCeEEE
Confidence            9998754  2222221      145689999999965 8899999999999999998654 3556778889999999999


Q ss_pred             ecc
Q 017868          309 VFR  311 (365)
Q Consensus       309 ~~~  311 (365)
                      +..
T Consensus       150 ~~~  152 (177)
T d1o89a2         150 VDS  152 (177)
T ss_dssp             CCS
T ss_pred             Eec
Confidence            754

>d1tt7a2 c.2.1.1 (A:128-294) Hypothetical protein YhfP {Bacillus subtilis [TaxId: 1423]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Alcohol dehydrogenase-like, C-terminal domain
domain: Hypothetical protein YhfP
species: Bacillus subtilis [TaxId: 1423]

Probab=99.76  E-value=1.6e-18  Score=138.13  Aligned_cols=145  Identities=17%  Similarity=0.240  Sum_probs=111.1

Q ss_pred             HHHHHH-hcCCCCCCEEEEEcC-CHHHHHHHHHHHHHCCCCeEEEEeCChhHHHHHHHcCCCEEEeCCCCcccHHHHHHH
Q 017868          170 GLHACR-RANIGPETNVLIMGA-GPIGLVTMLGAPRAFGAPRIVIVDVDDYRLSVAKEIGADNIVKVSTNLQDIAEEVEK  247 (365)
Q Consensus       170 a~~~~~-~~~~~~g~~vlI~G~-g~~G~~ai~~l~~~~g~~~vi~v~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~i~~  247 (365)
                      +++++. ....+++++|||+|+ |++|.+++| +|+.+|+ +|+++.++++|.++++++|++.++++++...   +.+  
T Consensus        11 a~~~L~~~g~~~~~~~VLV~gaaGgVG~~avQ-lAk~~Ga-~Viat~~s~~k~~~~~~lGad~vi~~~~~~~---~~~--   83 (167)
T d1tt7a2          11 SVHRLEQNGLSPEKGSVLVTGATGGVGGIAVS-MLNKRGY-DVVASTGNREAADYLKQLGASEVISREDVYD---GTL--   83 (167)
T ss_dssp             HHHHHHHTTCCGGGCCEEEESTTSHHHHHHHH-HHHHHTC-CEEEEESSSSTHHHHHHHTCSEEEEHHHHCS---SCC--
T ss_pred             HHHHHHHhcCCCCCCEEEEeCCcchHHHHHHH-HHHHcCC-ceEEEecCHHHHHHHHhhcccceEeccchhc---hhh--
Confidence            345554 355667889999986 999999999 9999999 5788889999999999999999987532111   111  


Q ss_pred             HHHHhCCCceEEEeCCCCHHHHHHHHHhcccCCEEEEEccCCC-CccccchHhhhcCcEEEeecccC---CcHHHHHHHH
Q 017868          248 IQKAMGTGIDVSFDCAGLNKTMSTALGATCAGGKVCLVGMGHH-EMTVPLTPAAVREVDVVGVFRYK---NTWPLCLELL  323 (365)
Q Consensus       248 ~~~~~~~~~d~vid~~g~~~~~~~~~~~l~~~G~~~~~g~~~~-~~~~~~~~~~~~~~~i~~~~~~~---~~~~~~~~~l  323 (365)
                       ..+.++++|+|||++|++ .+..++++|+++|+++.+|.... ...++...++.|+++++|.....   +...++++.+
T Consensus        84 -~~~~~~gvd~vid~vgg~-~~~~~~~~l~~~G~iv~~G~~~g~~~~~~~~~l~~k~~~i~G~~~~~~~~~~~~~~~~~l  161 (167)
T d1tt7a2          84 -KALSKQQWQGAVDPVGGK-QLASLLSKIQYGGSVAVSGLTGGGEVPATVYPFILRGVSLLGIDSVYCPMDVRAAVWERM  161 (167)
T ss_dssp             -CSSCCCCEEEEEESCCTH-HHHHHHTTEEEEEEEEECCCSSCSCEEECSHHHHTSCCEEEECCSSSCCHHHHHHHHHHT
T ss_pred             -hcccCCCceEEEecCcHH-HHHHHHHHhccCceEEEeeccCCCcccCCHHHHHHCCcEEEEEecCCCCHHHHHHHHHHH
Confidence             112367999999999975 88999999999999999996544 55778888999999999975442   2333444444

>d1v3va1 b.35.1.2 (A:1-112,A:295-329) Leukotriene b4 12-hydroxydehydrogenase/prostaglandin 15-keto reductase {Guinea pig (Cavia porcellus) [TaxId: 10141]}

class: All beta proteins
fold: GroES-like
superfamily: GroES-like
family: Alcohol dehydrogenase-like, N-terminal domain
domain: Leukotriene b4 12-hydroxydehydrogenase/prostaglandin 15-keto reductase
species: Guinea pig (Cavia porcellus) [TaxId: 10141]

Probab=99.65  E-value=1.8e-15  Score=116.87  Aligned_cols=131  Identities=14%  Similarity=0.031  Sum_probs=95.2

Q ss_pred             hcceeEEEec-------CCceEEEEecCCCCCCCcEEEEEeeeeeCcccHhhhhccccCCccCCCCcccCccceEEEEEe
Q 017868           16 EVNMAAWLLG-------VNTLKIQPFELPSLGPYDVLVRMKAVGICGSDVHYLKTLRCADFVVKEPMVIGHECAGVIEKV   88 (365)
Q Consensus        16 ~~~~~~~~~~-------~~~l~~~~~~~p~~~~~eVlI~v~~~~l~~~D~~~~~g~~~~~~~~~~p~~~G~e~~G~V~~v   88 (365)
                      .++|++++..       ++.|++++.++|+|++||||||+.|.+++|.....+..       .+..-.+..+++|+|++ 
T Consensus         2 ~~~k~~vl~~~P~G~P~~~~f~l~e~~ip~~~~gevLvk~~~~svDp~~R~~~~~-------~~~g~~~~g~~vg~Vv~-   73 (147)
T d1v3va1           2 VKAKSWTLKKHFQGKPTQSDFELKTVELPPLKNGEVLLEALFLSVDPYMRIASKR-------LKEGAVMMGQQVARVVE-   73 (147)
T ss_dssp             CEEEEEEESSCCCSSCCGGGEEEEEEECCCCCTTCEEEEEEEEECCTHHHHHGGG-------SCTTSBCCCCEEEEEEE-
T ss_pred             cccEEEEEccCCCCCCcccceEEEEEECCCCCCCEEEEEEEEEeEcccccccccc-------cccCCccccceEEEEEE-
Confidence            4566666663       24599999999999999999999999999865433221       23333455678999987 


Q ss_pred             CCCCCCCCCCCEEEEcCCcCCCCCccccCCCCCCCCCccccccCCCCcceeeEEeecCCceEECCCCCCcc-----hhcc
Q 017868           89 GSEVKTLVPGDRVALEPGISCWRCDHCKGGRYNLCPEMKFFATPPVHGSLANQVVHPADLCFKLPDNVSLE-----EGAM  163 (365)
Q Consensus        89 G~~v~~~~~Gd~V~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~v~~~~~~~iP~~~~~~-----~a~~  163 (365)
                       +++++|++||+|++.                               ++|+||.+++...+.++|+..+..     ..+.
T Consensus        74 -S~~~~f~~GD~V~g~-------------------------------~gw~ey~v~~~~~l~kv~~~~~~~~~~~~~~~~  121 (147)
T d1v3va1          74 -SKNSAFPAGSIVLAQ-------------------------------SGWTTHFISDGKGLEKLLTEWPDKKIQYHEHVT  121 (147)
T ss_dssp             -ESCTTSCTTCEEEEC-------------------------------CCSBSEEEECSSSCEECCTTCCTTSSCCCEEEE
T ss_pred             -eCCCcccCCCEEEEc-------------------------------cCCEeEEEeccceeeEccccccccccchhhhHh
Confidence             677889999999864                               789999999999999998765432     2333


Q ss_pred             ch-hhHH-HHHHHHhcCCCCCCEEEE
Q 017868          164 CE-PLSV-GLHACRRANIGPETNVLI  187 (365)
Q Consensus       164 ~~-~~~~-a~~~~~~~~~~~g~~vlI  187 (365)
                      +. ...| ||..+ ....+.|++||+
T Consensus       122 lG~~Gmtaay~gl-~~~~k~Getvv~  146 (147)
T d1v3va1         122 KGFENMPAAFIEM-LNGANLGKAVVT  146 (147)
T ss_dssp             ECGGGHHHHHHHH-HTTCCSSEEEEE
T ss_pred             ccccchHHHHHHh-hCCCCCCCEEEe
Confidence            32 4445 44444 334578999987

>d1o8ca2 c.2.1.1 (A:116-192) Hypothetical protein YhdH {Escherichia coli [TaxId: 562]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Alcohol dehydrogenase-like, C-terminal domain
domain: Hypothetical protein YhdH
species: Escherichia coli [TaxId: 562]

Probab=99.35  E-value=6.4e-13  Score=89.58  Aligned_cols=71  Identities=14%  Similarity=0.219  Sum_probs=61.0

Q ss_pred             CCcchhccch-hhHHHHHHH----HhcCCCCCCEEEEEcC-CHHHHHHHHHHHHHCCCCeEEEEeCChhHHHHHHHcCC
Q 017868          156 VSLEEGAMCE-PLSVGLHAC----RRANIGPETNVLIMGA-GPIGLVTMLGAPRAFGAPRIVIVDVDDYRLSVAKEIGA  228 (365)
Q Consensus       156 ~~~~~a~~~~-~~~~a~~~~----~~~~~~~g~~vlI~G~-g~~G~~ai~~l~~~~g~~~vi~v~~~~~~~~~~~~~g~  228 (365)
                      +|+++|+.++ ...|||.++    +....+++++|||+|+ |++|.+++| +++.+|+ +|+++++++++.++++++|+
T Consensus         1 ls~~eAa~lg~aGlTA~~al~~~~~~~~~~~~~~vlI~gasGgVG~~aiQ-lak~~G~-~Vi~~t~s~~k~~~~~~lGA   77 (77)
T d1o8ca2           1 LDARKAMIIGTAGFTAMLCVMALEDAGVRPQDGEIVVTGASGGVGSTAVA-LLHKLGY-QVVAVSGRESTHEYLKSLGA   77 (77)
T ss_dssp             CCHHHHHHHHHHHHHHHHHHHHHHHTTCCGGGCEEEESSTTSHHHHHHHH-HHHHTTC-CEEEEESCGGGHHHHHHHTE
T ss_pred             CCHHHHHHhhhHHHHHHHHHHHHHhhhhccCCCcEEEEeCCCcHHHHHHH-HHHHcCC-eEEEEECCHHHHHHHHHCCC
Confidence            5788999887 667888765    3466789999999976 999999999 9999999 58888899999999999985

>d1pjca1 c.2.1.4 (A:136-303) L-alanine dehydrogenase {Phormidium lapideum [TaxId: 32060]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Formate/glycerate dehydrogenases, NAD-domain
domain: L-alanine dehydrogenase
species: Phormidium lapideum [TaxId: 32060]

Probab=97.60  E-value=4.7e-05  Score=58.11  Aligned_cols=97  Identities=19%  Similarity=0.257  Sum_probs=69.4

Q ss_pred             CCCEEEEEcCCHHHHHHHHHHHHHCCCCeEEEEeCChhHHHHHHHcCCCEEEeCCCCcccHHHHHHHHHHHhCCCceEEE
Q 017868          181 PETNVLIMGAGPIGLVTMLGAPRAFGAPRIVIVDVDDYRLSVAKEIGADNIVKVSTNLQDIAEEVEKIQKAMGTGIDVSF  260 (365)
Q Consensus       181 ~g~~vlI~G~g~~G~~ai~~l~~~~g~~~vi~v~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~i~~~~~~~~~~~d~vi  260 (365)
                      +.-+|+|+|+|..|+.++. .|+.+|+ .|.+.|.+.++.+.++......+.....+.+    .+.+..    ..+|+||
T Consensus        31 ~pa~V~ViGaGvaG~~A~~-~A~~lGA-~V~~~D~~~~~l~~l~~~~~~~~~~~~~~~~----~l~~~~----~~aDivI  100 (168)
T d1pjca1          31 KPGKVVILGGGVVGTEAAK-MAVGLGA-QVQIFDINVERLSYLETLFGSRVELLYSNSA----EIETAV----AEADLLI  100 (168)
T ss_dssp             CCCEEEEECCSHHHHHHHH-HHHHTTC-EEEEEESCHHHHHHHHHHHGGGSEEEECCHH----HHHHHH----HTCSEEE
T ss_pred             CCcEEEEECCChHHHHHHH-HHhhCCC-EEEEEeCcHHHHHHHHHhhcccceeehhhhh----hHHHhh----ccCcEEE
Confidence            4579999999999999999 9999999 7899999999998887754322111112222    233322    3689999


Q ss_pred             eCCCCHH------HHHHHHHhcccCCEEEEEcc
Q 017868          261 DCAGLNK------TMSTALGATCAGGKVCLVGM  287 (365)
Q Consensus       261 d~~g~~~------~~~~~~~~l~~~G~~~~~g~  287 (365)
                      .++-.+.      .....++.+++++.++.+..
T Consensus       101 ~aalipG~~aP~lIt~~mv~~Mk~GSVIVDvai  133 (168)
T d1pjca1         101 GAVLVPGRRAPILVPASLVEQMRTGSVIVDVAV  133 (168)
T ss_dssp             ECCCCTTSSCCCCBCHHHHTTSCTTCEEEETTC
T ss_pred             EeeecCCcccCeeecHHHHhhcCCCcEEEEeec
Confidence            9775321      22367889999999999863

>d1jg1a_ c.66.1.7 (A:) Protein-L-isoaspartyl O-methyltransferase {Archaeon Pyrococcus furiosus [TaxId: 2261]}

class: Alpha and beta proteins (a/b)
fold: S-adenosyl-L-methionine-dependent methyltransferases
superfamily: S-adenosyl-L-methionine-dependent methyltransferases
family: Protein-L-isoaspartyl O-methyltransferase
domain: Protein-L-isoaspartyl O-methyltransferase
species: Archaeon Pyrococcus furiosus [TaxId: 2261]

Probab=97.56  E-value=5.3e-05  Score=61.13  Aligned_cols=103  Identities=18%  Similarity=0.203  Sum_probs=71.0

Q ss_pred             HHHHHhcCCCCCCEEEEEcCCHHHHHHHHHHHHHCCCCeEEEEeCChhHH----HHHHHcCCCEEEeCCCCc-ccHHHHH
Q 017868          171 LHACRRANIGPETNVLIMGAGPIGLVTMLGAPRAFGAPRIVIVDVDDYRL----SVAKEIGADNIVKVSTNL-QDIAEEV  245 (365)
Q Consensus       171 ~~~~~~~~~~~g~~vlI~G~g~~G~~ai~~l~~~~g~~~vi~v~~~~~~~----~~~~~~g~~~~~~~~~~~-~~~~~~i  245 (365)
                      ...++..++++|++||..|+|. |..++. +++..|. .|++++..++-.    +.++++|.+.+.....+. ..+    
T Consensus        68 a~ml~~L~l~~g~~VLeIGsGs-GY~tai-la~l~g~-~V~~ie~~~~l~~~a~~~l~~~g~~nv~~~~gd~~~g~----  140 (215)
T d1jg1a_          68 AIMLEIANLKPGMNILEVGTGS-GWNAAL-ISEIVKT-DVYTIERIPELVEFAKRNLERAGVKNVHVILGDGSKGF----  140 (215)
T ss_dssp             HHHHHHHTCCTTCCEEEECCTT-SHHHHH-HHHHHCS-CEEEEESCHHHHHHHHHHHHHTTCCSEEEEESCGGGCC----
T ss_pred             HHHHHhhccCccceEEEecCCC-ChhHHH-HHHhhCc-eeEEEeccHHHHHHHHHHHHHcCCceeEEEECccccCC----
Confidence            3456778899999999998854 666666 7766675 688998887644    445667876654432221 111    


Q ss_pred             HHHHHHhCCCceEEEeCCCCHHHHHHHHHhcccCCEEEEE
Q 017868          246 EKIQKAMGTGIDVSFDCAGLNKTMSTALGATCAGGKVCLV  285 (365)
Q Consensus       246 ~~~~~~~~~~~d~vid~~g~~~~~~~~~~~l~~~G~~~~~  285 (365)
                           ....++|.|+-..+........++.|++||+++..
T Consensus       141 -----~~~~pfD~Iiv~~a~~~ip~~l~~qL~~gGrLv~p  175 (215)
T d1jg1a_         141 -----PPKAPYDVIIVTAGAPKIPEPLIEQLKIGGKLIIP  175 (215)
T ss_dssp             -----GGGCCEEEEEECSBBSSCCHHHHHTEEEEEEEEEE
T ss_pred             -----cccCcceeEEeecccccCCHHHHHhcCCCCEEEEE
Confidence                 11478999988766554456788899999999864

>d2d1ya1 c.2.1.2 (A:2-249) Hypothetical protein TTHA0369 {Thermus thermophilus [TaxId: 274]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Tyrosine-dependent oxidoreductases
domain: Hypothetical protein TTHA0369
species: Thermus thermophilus [TaxId: 274]

Probab=97.54  E-value=0.00028  Score=58.33  Aligned_cols=81  Identities=23%  Similarity=0.249  Sum_probs=59.0

Q ss_pred             CCCCEEEEEcC-CHHHHHHHHHHHHHCCCCeEEEEeCChhHHHHHHHcCCCEEEeCC-CCcccHHHHHHHHHHHhCCCce
Q 017868          180 GPETNVLIMGA-GPIGLVTMLGAPRAFGAPRIVIVDVDDYRLSVAKEIGADNIVKVS-TNLQDIAEEVEKIQKAMGTGID  257 (365)
Q Consensus       180 ~~g~~vlI~G~-g~~G~~ai~~l~~~~g~~~vi~v~~~~~~~~~~~~~g~~~~~~~~-~~~~~~~~~i~~~~~~~~~~~d  257 (365)
                      -+|+++||+|+ +++|.++++.+ ...|+ +|+.+++++++.+.+++++...+ ..+ .+.++..+.+.+..+.. +++|
T Consensus         3 l~GK~alITGas~GIG~aia~~l-a~~G~-~V~~~~~~~~~~~~~~~~~~~~~-~~Dv~~~~~v~~~~~~~~~~~-G~iD   78 (248)
T d2d1ya1           3 FAGKGVLVTGGARGIGRAIAQAF-AREGA-LVALCDLRPEGKEVAEAIGGAFF-QVDLEDERERVRFVEEAAYAL-GRVD   78 (248)
T ss_dssp             TTTCEEEEETTTSHHHHHHHHHH-HHTTC-EEEEEESSTTHHHHHHHHTCEEE-ECCTTCHHHHHHHHHHHHHHH-SCCC
T ss_pred             cCCCEEEEeCCCCHHHHHHHHHH-HHCCC-EEEEEECCHHHHHHHHHcCCeEE-EEeCCCHHHHHHHHHHHHHhc-CCCC
Confidence            36899999987 99999999945 46699 68888888888888888887543 222 23344444555554433 5899


Q ss_pred             EEEeCCC
Q 017868          258 VSFDCAG  264 (365)
Q Consensus       258 ~vid~~g  264 (365)
                      +++.++|
T Consensus        79 iLVnnAG   85 (248)
T d2d1ya1          79 VLVNNAA   85 (248)
T ss_dssp             EEEECCC
T ss_pred             eEEEeCc
Confidence            9999887

>d1l7da1 c.2.1.4 (A:144-326) Nicotinamide nucleotide transhydrogenase dI component {Rhodospirillum rubrum [TaxId: 1085]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Formate/glycerate dehydrogenases, NAD-domain
domain: Nicotinamide nucleotide transhydrogenase dI component
species: Rhodospirillum rubrum [TaxId: 1085]

Probab=97.53  E-value=0.00017  Score=55.68  Aligned_cols=104  Identities=18%  Similarity=0.285  Sum_probs=70.8

Q ss_pred             CCCEEEEEcCCHHHHHHHHHHHHHCCCCeEEEEeCChhHHHHHHHcCCCEEEeCCCCcc------cHHH---------HH
Q 017868          181 PETNVLIMGAGPIGLVTMLGAPRAFGAPRIVIVDVDDYRLSVAKEIGADNIVKVSTNLQ------DIAE---------EV  245 (365)
Q Consensus       181 ~g~~vlI~G~g~~G~~ai~~l~~~~g~~~vi~v~~~~~~~~~~~~~g~~~~~~~~~~~~------~~~~---------~i  245 (365)
                      +.-+|+|+|+|.+|+.++. .|+.+|+ +|.+.|.+.++.+.+++++...+........      .+++         +.
T Consensus        28 ~pa~VvViGaGvaG~~Aa~-~A~~lGA-~V~v~D~~~~~~~~l~~l~~~~i~~~~~~~~~~~~~~gyA~~~s~~~~~~~~  105 (183)
T d1l7da1          28 PPARVLVFGVGVAGLQAIA-TAKRLGA-VVMATDVRAATKEQVESLGGKFITVDDEAMKTAETAGGYAKEMGEEFRKKQA  105 (183)
T ss_dssp             CCCEEEEECCSHHHHHHHH-HHHHTTC-EEEEECSCSTTHHHHHHTTCEECCC-----------------------CCHH
T ss_pred             CCcEEEEEcCcHHHHHHHH-HHHHcCC-EEEEEeccHHHHHHHHHhhcceEEEeccccccccccccchhhcCHHHHHHHH
Confidence            4469999999999999999 9999999 7999999999999999998755321111000      0111         11


Q ss_pred             HHHHHHhCCCceEEEeCCCCH------HHHHHHHHhcccCCEEEEEcc
Q 017868          246 EKIQKAMGTGIDVSFDCAGLN------KTMSTALGATCAGGKVCLVGM  287 (365)
Q Consensus       246 ~~~~~~~~~~~d~vid~~g~~------~~~~~~~~~l~~~G~~~~~g~  287 (365)
                      +.+.+. -...|+||-++-.+      -.-...++.|++++.++.++.
T Consensus       106 ~~l~~~-l~~aDlVI~talipG~~aP~lit~~mv~~Mk~GSVIVDvai  152 (183)
T d1l7da1         106 EAVLKE-LVKTDIAITTALIPGKPAPVLITEEMVTKMKPGSVIIDLAV  152 (183)
T ss_dssp             HHHHHH-HTTCSEEEECCCCTTSCCCCCSCHHHHTTSCTTCEEEETTG
T ss_pred             HHHHHH-HHhhhhheeeeecCCcccceeehHHHHHhcCCCcEEEEEee
Confidence            111111 24799999876422      123467889999999999863

>d1npya1 c.2.1.7 (A:103-269) Shikimate 5-dehydrogenase-like protein HI0607 {Haemophilus influenzae [TaxId: 727]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Aminoacid dehydrogenase-like, C-terminal domain
domain: Shikimate 5-dehydrogenase-like protein HI0607
species: Haemophilus influenzae [TaxId: 727]

Probab=97.47  E-value=0.00034  Score=53.95  Aligned_cols=74  Identities=12%  Similarity=0.154  Sum_probs=55.9

Q ss_pred             HHHhcCCCCCCEEEEEcCCHHHHHHHHHHHHHCCCCeEEEEeCChhHHHHH-HHcCCCEEEeCCCCcccHHHHHHHHHHH
Q 017868          173 ACRRANIGPETNVLIMGAGPIGLVTMLGAPRAFGAPRIVIVDVDDYRLSVA-KEIGADNIVKVSTNLQDIAEEVEKIQKA  251 (365)
Q Consensus       173 ~~~~~~~~~g~~vlI~G~g~~G~~ai~~l~~~~g~~~vi~v~~~~~~~~~~-~~~g~~~~~~~~~~~~~~~~~i~~~~~~  251 (365)
                      .++..++.++.+|||.|+|+.+.+++. .++..|++.+..+.++.+|.+.+ +.++....... .               
T Consensus         8 ~l~~~~~~~~~~vlIlGaGGaarai~~-aL~~~g~~~I~I~nR~~~ka~~L~~~~~~~~~~~~-~---------------   70 (167)
T d1npya1           8 LIEKYHLNKNAKVIVHGSGGMAKAVVA-AFKNSGFEKLKIYARNVKTGQYLAALYGYAYINSL-E---------------   70 (167)
T ss_dssp             HHHHTTCCTTSCEEEECSSTTHHHHHH-HHHHTTCCCEEEECSCHHHHHHHHHHHTCEEESCC-T---------------
T ss_pred             HHHHcCCCCCCeEEEECCCHHHHHHHH-HHHHCCCCEEEEecccHHHHHHHHHhhhhhhhhcc-c---------------
Confidence            456667778899999999999999999 77788998888899998887655 55665432111 0               


Q ss_pred             hCCCceEEEeCCC
Q 017868          252 MGTGIDVSFDCAG  264 (365)
Q Consensus       252 ~~~~~d~vid~~g  264 (365)
                       ...+|++|+|+.
T Consensus        71 -~~~~DliINaTp   82 (167)
T d1npya1          71 -NQQADILVNVTS   82 (167)
T ss_dssp             -TCCCSEEEECSS
T ss_pred             -ccchhhheeccc
Confidence             246899999875

>d1dl5a1 c.66.1.7 (A:1-213) Protein-L-isoaspartyl O-methyltransferase {Thermotoga maritima [TaxId: 2336]}

class: Alpha and beta proteins (a/b)
fold: S-adenosyl-L-methionine-dependent methyltransferases
superfamily: S-adenosyl-L-methionine-dependent methyltransferases
family: Protein-L-isoaspartyl O-methyltransferase
domain: Protein-L-isoaspartyl O-methyltransferase
species: Thermotoga maritima [TaxId: 2336]

Probab=97.43  E-value=0.00014  Score=58.70  Aligned_cols=103  Identities=22%  Similarity=0.271  Sum_probs=68.5

Q ss_pred             HHHhcCCCCCCEEEEEcCCHHHHHHHHHHHHHCCC-CeEEEEeCChhHHHHHHH----cCCCEEEeCCCCcccHHHHHHH
Q 017868          173 ACRRANIGPETNVLIMGAGPIGLVTMLGAPRAFGA-PRIVIVDVDDYRLSVAKE----IGADNIVKVSTNLQDIAEEVEK  247 (365)
Q Consensus       173 ~~~~~~~~~g~~vlI~G~g~~G~~ai~~l~~~~g~-~~vi~v~~~~~~~~~~~~----~g~~~~~~~~~~~~~~~~~i~~  247 (365)
                      .++..++++|++||-.|+|. |..++. +++..|. ..|++++.+++..+.+++    .+...+.....+..+.   .  
T Consensus        67 ~l~~l~l~~g~~VLdiG~Gt-G~~s~~-la~~~~~~g~V~~id~~~~~~~~a~~~~~~~~~~n~~~~~~d~~~~---~--  139 (213)
T d1dl5a1          67 FMEWVGLDKGMRVLEIGGGT-GYNAAV-MSRVVGEKGLVVSVEYSRKICEIAKRNVERLGIENVIFVCGDGYYG---V--  139 (213)
T ss_dssp             HHHHTTCCTTCEEEEECCTT-SHHHHH-HHHHHCTTCEEEEEESCHHHHHHHHHHHHHTTCCSEEEEESCGGGC---C--
T ss_pred             HHHhhhccccceEEEecCcc-chhHHH-HHHHhCCCCcEEEeecchhhHHHhhhhHhhhcccccccccCchHHc---c--
Confidence            46778899999999999865 666666 7776663 378999999877665543    4554333221211110   0  


Q ss_pred             HHHHhCCCceEEEeCCCCHHHHHHHHHhcccCCEEEEE
Q 017868          248 IQKAMGTGIDVSFDCAGLNKTMSTALGATCAGGKVCLV  285 (365)
Q Consensus       248 ~~~~~~~~~d~vid~~g~~~~~~~~~~~l~~~G~~~~~  285 (365)
                         .....||+|+...+.....+..++.|+++|+++..
T Consensus       140 ---~~~~~fD~I~~~~~~~~~p~~l~~~LkpGG~lv~p  174 (213)
T d1dl5a1         140 ---PEFSPYDVIFVTVGVDEVPETWFTQLKEGGRVIVP  174 (213)
T ss_dssp             ---GGGCCEEEEEECSBBSCCCHHHHHHEEEEEEEEEE
T ss_pred             ---ccccchhhhhhhccHHHhHHHHHHhcCCCcEEEEE
Confidence               01357999998766443445678899999999863

>d1yb2a1 c.66.1.13 (A:6-255) Hypothetical protein Ta0852 {Thermoplasma acidophilum [TaxId: 2303]}

class: Alpha and beta proteins (a/b)
fold: S-adenosyl-L-methionine-dependent methyltransferases
superfamily: S-adenosyl-L-methionine-dependent methyltransferases
family: tRNA(1-methyladenosine) methyltransferase-like
domain: Hypothetical protein Ta0852
species: Thermoplasma acidophilum [TaxId: 2303]

Probab=97.32  E-value=0.0003  Score=57.96  Aligned_cols=102  Identities=18%  Similarity=0.224  Sum_probs=66.2

Q ss_pred             HHhcCCCCCCEEEEEcCCHHHHHHHHHHHHHCCC-CeEEEEeCChhHHHHHHH----cC-CCEEEeCCCCcccHHHHHHH
Q 017868          174 CRRANIGPETNVLIMGAGPIGLVTMLGAPRAFGA-PRIVIVDVDDYRLSVAKE----IG-ADNIVKVSTNLQDIAEEVEK  247 (365)
Q Consensus       174 ~~~~~~~~g~~vlI~G~g~~G~~ai~~l~~~~g~-~~vi~v~~~~~~~~~~~~----~g-~~~~~~~~~~~~~~~~~i~~  247 (365)
                      +...++++|++||=.|+|. |.+++. +++..|. .+|++++.+++..+.+++    ++ ...+.....   |+.+.+  
T Consensus        78 i~~l~i~pG~rVLEiG~Gs-G~lt~~-la~~v~~~g~V~~vD~~e~~~~~A~~n~~~~~~~~nv~~~~~---Di~~~~--  150 (250)
T d1yb2a1          78 IMRCGLRPGMDILEVGVGS-GNMSSY-ILYALNGKGTLTVVERDEDNLKKAMDNLSEFYDIGNVRTSRS---DIADFI--  150 (250)
T ss_dssp             ---CCCCTTCEEEEECCTT-SHHHHH-HHHHHTTSSEEEEECSCHHHHHHHHHHHHTTSCCTTEEEECS---CTTTCC--
T ss_pred             HHHcCCCCcCEEEEeeeeC-cHHHHH-HHHHhCCCcEEEEEECCHHHHHHHHHHHHHhcCCCceEEEEe---eeeccc--
Confidence            4668899999999998754 556666 6666553 389999999988776654    22 232222111   221111  


Q ss_pred             HHHHhCCCceEEE-eCCCCHHHHHHHHHhcccCCEEEEEc
Q 017868          248 IQKAMGTGIDVSF-DCAGLNKTMSTALGATCAGGKVCLVG  286 (365)
Q Consensus       248 ~~~~~~~~~d~vi-d~~g~~~~~~~~~~~l~~~G~~~~~g  286 (365)
                          ....+|.|+ |.......+..+.++|+++|+++.+.
T Consensus       151 ----~~~~fD~V~ld~p~p~~~l~~~~~~LKpGG~lv~~~  186 (250)
T d1yb2a1         151 ----SDQMYDAVIADIPDPWNHVQKIASMMKPGSVATFYL  186 (250)
T ss_dssp             ----CSCCEEEEEECCSCGGGSHHHHHHTEEEEEEEEEEE
T ss_pred             ----ccceeeeeeecCCchHHHHHHHHHhcCCCceEEEEe
Confidence                146799887 44444457788999999999999874

>d1o54a_ c.66.1.13 (A:) Hypothetical protein TM0748 {Thermotoga maritima [TaxId: 2336]}

class: Alpha and beta proteins (a/b)
fold: S-adenosyl-L-methionine-dependent methyltransferases
superfamily: S-adenosyl-L-methionine-dependent methyltransferases
family: tRNA(1-methyladenosine) methyltransferase-like
domain: Hypothetical protein TM0748
species: Thermotoga maritima [TaxId: 2336]

Probab=97.31  E-value=0.00097  Score=55.41  Aligned_cols=107  Identities=17%  Similarity=0.197  Sum_probs=70.9

Q ss_pred             HHHHHHhcCCCCCCEEEEEcCCHHHHHHHHHHHHHCCC-CeEEEEeCChhHHHHH----HHcCCCEEEeCCCCcccHHHH
Q 017868          170 GLHACRRANIGPETNVLIMGAGPIGLVTMLGAPRAFGA-PRIVIVDVDDYRLSVA----KEIGADNIVKVSTNLQDIAEE  244 (365)
Q Consensus       170 a~~~~~~~~~~~g~~vlI~G~g~~G~~ai~~l~~~~g~-~~vi~v~~~~~~~~~~----~~~g~~~~~~~~~~~~~~~~~  244 (365)
                      +.+.+...++++|++||=.|+|. |..++. +|+..+. .++++++.+++..+.+    +.++....+.....  +....
T Consensus        92 ~~~Ii~~l~i~pG~~VLDiG~Gs-G~lt~~-lA~~~~~~G~V~~vD~~~~~~~~A~~~~~~~g~~~~v~~~~~--d~~~~  167 (266)
T d1o54a_          92 SSFIAMMLDVKEGDRIIDTGVGS-GAMCAV-LARAVGSSGKVFAYEKREEFAKLAESNLTKWGLIERVTIKVR--DISEG  167 (266)
T ss_dssp             HHHHHHHTTCCTTCEEEEECCTT-SHHHHH-HHHHTTTTCEEEEECCCHHHHHHHHHHHHHTTCGGGEEEECC--CGGGC
T ss_pred             HHHHHHhhCCCCCCEEEECCCCC-CHHHHH-HHHHhCCCcEEEEEeCCHHHHHHHHHHHHHhccccCcEEEec--ccccc
Confidence            34456788999999999998865 666667 7777653 3799999999877655    44564222221111  11110


Q ss_pred             HHHHHHHhCCCceEEEeCCCC-HHHHHHHHHhcccCCEEEEEc
Q 017868          245 VEKIQKAMGTGIDVSFDCAGL-NKTMSTALGATCAGGKVCLVG  286 (365)
Q Consensus       245 i~~~~~~~~~~~d~vid~~g~-~~~~~~~~~~l~~~G~~~~~g  286 (365)
                            .....+|.|+--... ...+..+.++|+++|+++.+.
T Consensus       168 ------~~~~~~D~V~~d~p~p~~~l~~~~~~LKpGG~lv~~~  204 (266)
T d1o54a_         168 ------FDEKDVDALFLDVPDPWNYIDKCWEALKGGGRFATVC  204 (266)
T ss_dssp             ------CSCCSEEEEEECCSCGGGTHHHHHHHEEEEEEEEEEE
T ss_pred             ------ccccceeeeEecCCCHHHHHHHHHhhcCCCCEEEEEe
Confidence                  124568877654444 457789999999999999874

>d1gpja2 c.2.1.7 (A:144-302) Glutamyl tRNA-reductase middle domain {Archaeon Methanopyrus kandleri [TaxId: 2320]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Aminoacid dehydrogenase-like, C-terminal domain
domain: Glutamyl tRNA-reductase middle domain
species: Archaeon Methanopyrus kandleri [TaxId: 2320]

Probab=97.29  E-value=0.00079  Score=51.29  Aligned_cols=73  Identities=18%  Similarity=0.355  Sum_probs=54.1

Q ss_pred             CCCCEEEEEcCCHHHHHHHHHHHHHCCCCeEEEEeCChhHHH-HHHHcCCCEEEeCCCCcccHHHHHHHHHHHhCCCceE
Q 017868          180 GPETNVLIMGAGPIGLVTMLGAPRAFGAPRIVIVDVDDYRLS-VAKEIGADNIVKVSTNLQDIAEEVEKIQKAMGTGIDV  258 (365)
Q Consensus       180 ~~g~~vlI~G~g~~G~~ai~~l~~~~g~~~vi~v~~~~~~~~-~~~~~g~~~~~~~~~~~~~~~~~i~~~~~~~~~~~d~  258 (365)
                      -.+.+|||.|+|.+|..+++ .+...|++.+.++.++.+|.+ ++++++... ..+    .++.+.+        ..+|+
T Consensus        22 l~~~~ilviGaG~~g~~v~~-~L~~~g~~~i~v~nRt~~ka~~l~~~~~~~~-~~~----~~~~~~l--------~~~Di   87 (159)
T d1gpja2          22 LHDKTVLVVGAGEMGKTVAK-SLVDRGVRAVLVANRTYERAVELARDLGGEA-VRF----DELVDHL--------ARSDV   87 (159)
T ss_dssp             CTTCEEEEESCCHHHHHHHH-HHHHHCCSEEEEECSSHHHHHHHHHHHTCEE-CCG----GGHHHHH--------HTCSE
T ss_pred             cccCeEEEECCCHHHHHHHH-HHHhcCCcEEEEEcCcHHHHHHHHHhhhccc-ccc----hhHHHHh--------ccCCE
Confidence            47789999999999999999 555669988888888877764 778888542 222    2333322        36999


Q ss_pred             EEeCCCCH
Q 017868          259 SFDCAGLN  266 (365)
Q Consensus       259 vid~~g~~  266 (365)
                      ||.|++.+
T Consensus        88 vi~atss~   95 (159)
T d1gpja2          88 VVSATAAP   95 (159)
T ss_dssp             EEECCSSS
T ss_pred             EEEecCCC
Confidence            99999853

>d1ulsa_ c.2.1.2 (A:) beta-keto acyl carrier protein reductase {Thermus thermophilus [TaxId: 274]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Tyrosine-dependent oxidoreductases
domain: beta-keto acyl carrier protein reductase
species: Thermus thermophilus [TaxId: 274]

Probab=97.17  E-value=0.002  Score=52.78  Aligned_cols=80  Identities=25%  Similarity=0.336  Sum_probs=56.0

Q ss_pred             CCCEEEEEcC-CHHHHHHHHHHHHHCCCCeEEEEeCChhHHHH-HHHcCCCEEEeCC-CCcccHHHHHHHHHHHhCCCce
Q 017868          181 PETNVLIMGA-GPIGLVTMLGAPRAFGAPRIVIVDVDDYRLSV-AKEIGADNIVKVS-TNLQDIAEEVEKIQKAMGTGID  257 (365)
Q Consensus       181 ~g~~vlI~G~-g~~G~~ai~~l~~~~g~~~vi~v~~~~~~~~~-~~~~g~~~~~~~~-~~~~~~~~~i~~~~~~~~~~~d  257 (365)
                      +|+++||+|+ +++|.++++.+ ...|+ +|+.+++++++.+. .+++++..+ ..+ .+.++..+.+++..+.. +++|
T Consensus         4 ~gK~~lITGas~GIG~aia~~l-~~~G~-~V~~~~r~~~~l~~~~~~~~~~~~-~~Dv~~~~~v~~~~~~~~~~~-g~iD   79 (242)
T d1ulsa_           4 KDKAVLITGAAHGIGRATLELF-AKEGA-RLVACDIEEGPLREAAEAVGAHPV-VMDVADPASVERGFAEALAHL-GRLD   79 (242)
T ss_dssp             TTCEEEEESTTSHHHHHHHHHH-HHTTC-EEEEEESCHHHHHHHHHTTTCEEE-ECCTTCHHHHHHHHHHHHHHH-SSCC
T ss_pred             CCCEEEEeCCCCHHHHHHHHHH-HHCCC-EEEEEECCHHHHHHHHHHcCCeEE-EEecCCHHHHHHHHHHHHHhc-CCce
Confidence            4789999987 99999999945 56699 68888888887764 456776543 233 23344555555554433 5799


Q ss_pred             EEEeCCC
Q 017868          258 VSFDCAG  264 (365)
Q Consensus       258 ~vid~~g  264 (365)
                      ++|.++|
T Consensus        80 ilVnnAG   86 (242)
T d1ulsa_          80 GVVHYAG   86 (242)
T ss_dssp             EEEECCC
T ss_pred             EEEECCc
Confidence            9999887

>d1wmaa1 c.2.1.2 (A:2-276) Carbonyl reductase/20beta-hydroxysteroid dehydrogenase {Human (Homo sapiens) [TaxId: 9606]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Tyrosine-dependent oxidoreductases
domain: Carbonyl reductase/20beta-hydroxysteroid dehydrogenase
species: Human (Homo sapiens) [TaxId: 9606]

Probab=97.14  E-value=0.002  Score=53.85  Aligned_cols=105  Identities=24%  Similarity=0.302  Sum_probs=64.5

Q ss_pred             CCCEE-EEEcC-CHHHHHHHHHHHHHCCCCeEEEEeCChhHHHH-HH---HcCC-CEEEeCCC-CcccHHHHHHHHHHHh
Q 017868          181 PETNV-LIMGA-GPIGLVTMLGAPRAFGAPRIVIVDVDDYRLSV-AK---EIGA-DNIVKVST-NLQDIAEEVEKIQKAM  252 (365)
Q Consensus       181 ~g~~v-lI~G~-g~~G~~ai~~l~~~~g~~~vi~v~~~~~~~~~-~~---~~g~-~~~~~~~~-~~~~~~~~i~~~~~~~  252 (365)
                      +|.+| ||+|+ +++|.++++.+++.-|+ +|+.+.+++++.+. ++   +.+. ...+..+- +.++..+...++.+. 
T Consensus         1 ~g~rVAlVTGas~GIG~a~A~~la~~~g~-~Vi~~~r~~~~~~~~~~~l~~~~~~~~~~~~Dvs~~~sv~~~~~~~~~~-   78 (275)
T d1wmaa1           1 SGIHVALVTGGNKGIGLAIVRDLCRLFSG-DVVLTARDVTRGQAAVQQLQAEGLSPRFHQLDIDDLQSIRALRDFLRKE-   78 (275)
T ss_dssp             CCCCEEEESSCSSHHHHHHHHHHHHHSSS-EEEEEESSHHHHHHHHHHHHHTTCCCEEEECCTTCHHHHHHHHHHHHHH-
T ss_pred             CCCeEEEECCCCCHHHHHHHHHHHHhCCC-EEEEEECCHHHHHHHHHHHHhcCCcEEEEEEecCCHHHHHHHHHHHHHh-
Confidence            46778 66787 99999998867776677 67888888877643 23   3343 22333332 223333333444333 


Q ss_pred             CCCceEEEeCCCCH-------------------------HHHHHHHHhcccCCEEEEEcc
Q 017868          253 GTGIDVSFDCAGLN-------------------------KTMSTALGATCAGGKVCLVGM  287 (365)
Q Consensus       253 ~~~~d~vid~~g~~-------------------------~~~~~~~~~l~~~G~~~~~g~  287 (365)
                      .+++|++|+++|..                         .....++..|++.|+++.++.
T Consensus        79 ~g~iDiLVnNAGi~~~~~~~~~~~~~~~~~~~vN~~g~~~l~~~~lp~m~~~g~ivnisS  138 (275)
T d1wmaa1          79 YGGLDVLVNNAGIAFKVADPTPFHIQAEVTMKTNFFGTRDVCTELLPLIKPQGRVVNVSS  138 (275)
T ss_dssp             HSSEEEEEECCCCCCCTTCCSCHHHHHHHHHHHHTHHHHHHHHHHGGGEEEEEEEEEECC
T ss_pred             cCCcEEEEEcCCcCCCCCcccCCHHHHHHHHHHHHHHHHHHHHHHHHHHHhcCCcccccc
Confidence            35899999988831                         122234556677899888753

>d1ydea1 c.2.1.2 (A:4-253) Retinal dehydrogenase/reductase 3 {Human (Homo sapiens) [TaxId: 9606]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Tyrosine-dependent oxidoreductases
domain: Retinal dehydrogenase/reductase 3
species: Human (Homo sapiens) [TaxId: 9606]

Probab=97.13  E-value=0.0019  Score=53.07  Aligned_cols=81  Identities=21%  Similarity=0.264  Sum_probs=55.2

Q ss_pred             CCCEEEEEcC-CHHHHHHHHHHHHHCCCCeEEEEeCChhHHHHH-HHcCCCEEEeCCC-CcccHHHHHHHHHHHhCCCce
Q 017868          181 PETNVLIMGA-GPIGLVTMLGAPRAFGAPRIVIVDVDDYRLSVA-KEIGADNIVKVST-NLQDIAEEVEKIQKAMGTGID  257 (365)
Q Consensus       181 ~g~~vlI~G~-g~~G~~ai~~l~~~~g~~~vi~v~~~~~~~~~~-~~~g~~~~~~~~~-~~~~~~~~i~~~~~~~~~~~d  257 (365)
                      +|+++||+|+ +++|.++++.++ ..|+ +|+.+++++++.+.+ ++++-...+..+- +.++..+.+++..+.. +++|
T Consensus         5 ~GK~alITGas~GIG~aia~~la-~~Ga-~V~i~~r~~~~~~~~~~~~~~~~~~~~Dvs~~~~v~~~~~~~~~~~-g~iD   81 (250)
T d1ydea1           5 AGKVVVVTGGGRGIGAGIVRAFV-NSGA-RVVICDKDESGGRALEQELPGAVFILCDVTQEDDVKTLVSETIRRF-GRLD   81 (250)
T ss_dssp             TTCEEEEETCSSHHHHHHHHHHH-HTTC-EEEEEESCHHHHHHHHHHCTTEEEEECCTTSHHHHHHHHHHHHHHH-SCCC
T ss_pred             CCCEEEEeCCCCHHHHHHHHHHH-HCCC-EEEEEECCHHHHHHHHHhcCCCeEEEccCCCHHHHHHHHHHHHHhc-CCCC
Confidence            6889999987 999999999554 5699 678888888887655 4555433333332 2334444444444433 5799


Q ss_pred             EEEeCCC
Q 017868          258 VSFDCAG  264 (365)
Q Consensus       258 ~vid~~g  264 (365)
                      +++.++|
T Consensus        82 ilVnnAG   88 (250)
T d1ydea1          82 CVVNNAG   88 (250)
T ss_dssp             EEEECCC
T ss_pred             EEEeccc
Confidence            9999887

>d1q7ba_ c.2.1.2 (A:) beta-keto acyl carrier protein reductase {Escherichia coli [TaxId: 562]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Tyrosine-dependent oxidoreductases
domain: beta-keto acyl carrier protein reductase
species: Escherichia coli [TaxId: 562]

Probab=97.13  E-value=0.0034  Score=51.29  Aligned_cols=81  Identities=21%  Similarity=0.273  Sum_probs=54.4

Q ss_pred             CCCEEEEEcC-CHHHHHHHHHHHHHCCCCeEEEEeCChhHHH-HHHHcCCCE-EEeCCC-CcccHHHHHHHHHHHhCCCc
Q 017868          181 PETNVLIMGA-GPIGLVTMLGAPRAFGAPRIVIVDVDDYRLS-VAKEIGADN-IVKVST-NLQDIAEEVEKIQKAMGTGI  256 (365)
Q Consensus       181 ~g~~vlI~G~-g~~G~~ai~~l~~~~g~~~vi~v~~~~~~~~-~~~~~g~~~-~~~~~~-~~~~~~~~i~~~~~~~~~~~  256 (365)
                      +|+++||+|+ +++|.++++.++ ..|+ +|+.+++++++.+ +.++++... .+..+- +.++..+.+++..+. -+++
T Consensus         3 ~gK~alITGas~GIG~a~a~~l~-~~G~-~Vv~~~r~~~~l~~~~~~~~~~~~~~~~Dv~~~~~v~~~~~~~~~~-~g~i   79 (243)
T d1q7ba_           3 EGKIALVTGASRGIGRAIAETLA-ARGA-KVIGTATSENGAQAISDYLGANGKGLMLNVTDPASIESVLEKIRAE-FGEV   79 (243)
T ss_dssp             TTCEEEESSCSSHHHHHHHHHHH-HTTC-EEEEEESSHHHHHHHHHHHGGGEEEEECCTTCHHHHHHHHHHHHHH-TCSC
T ss_pred             CCCEEEEeCCCCHHHHHHHHHHH-HcCC-EEEEEeCCHHHHHHHHHHhCCCCcEEEEEecCHHHhhhhhhhhhcc-cCCc
Confidence            5788999987 999999999554 5699 5788888888765 445666432 222222 234444445554443 4689


Q ss_pred             eEEEeCCC
Q 017868          257 DVSFDCAG  264 (365)
Q Consensus       257 d~vid~~g  264 (365)
                      |+++.++|
T Consensus        80 DilVnnAg   87 (243)
T d1q7ba_          80 DILVNNAG   87 (243)
T ss_dssp             SEEEECCC
T ss_pred             ceehhhhh
Confidence            99999887

>d1vbfa_ c.66.1.7 (A:) Protein-L-isoaspartyl O-methyltransferase {Sulfolobus tokodaii [TaxId: 111955]}

class: Alpha and beta proteins (a/b)
fold: S-adenosyl-L-methionine-dependent methyltransferases
superfamily: S-adenosyl-L-methionine-dependent methyltransferases
family: Protein-L-isoaspartyl O-methyltransferase
domain: Protein-L-isoaspartyl O-methyltransferase
species: Sulfolobus tokodaii [TaxId: 111955]

Probab=97.10  E-value=0.00084  Score=54.18  Aligned_cols=101  Identities=17%  Similarity=0.167  Sum_probs=67.1

Q ss_pred             HHHHhcCCCCCCEEEEEcCCHHHHHHHHHHHHHCCCCeEEEEeCChhHHHHHHHcC--CCEEEeCCCC-cccHHHHHHHH
Q 017868          172 HACRRANIGPETNVLIMGAGPIGLVTMLGAPRAFGAPRIVIVDVDDYRLSVAKEIG--ADNIVKVSTN-LQDIAEEVEKI  248 (365)
Q Consensus       172 ~~~~~~~~~~g~~vlI~G~g~~G~~ai~~l~~~~g~~~vi~v~~~~~~~~~~~~~g--~~~~~~~~~~-~~~~~~~i~~~  248 (365)
                      ..++...+++|++||-.|+|. |..++. +++. +. .|++++.+++..+.+++.-  ...+.....+ ...+.      
T Consensus        61 ~ml~~L~l~~g~~VLdIG~Gs-Gy~ta~-La~l-~~-~V~aiE~~~~~~~~A~~~~~~~~nv~~~~~d~~~g~~------  130 (224)
T d1vbfa_          61 FMLDELDLHKGQKVLEIGTGI-GYYTAL-IAEI-VD-KVVSVEINEKMYNYASKLLSYYNNIKLILGDGTLGYE------  130 (224)
T ss_dssp             HHHHHTTCCTTCEEEEECCTT-SHHHHH-HHHH-SS-EEEEEESCHHHHHHHHHHHTTCSSEEEEESCGGGCCG------
T ss_pred             HHHHHhhhcccceEEEecCCC-CHHHHH-HHHH-hc-ccccccccHHHHHHHHHHHhcccccccccCchhhcch------
Confidence            356778999999999999864 666666 7665 44 6999999998888776642  1211111111 11111      


Q ss_pred             HHHhCCCceEEEeCCCCHHHHHHHHHhcccCCEEEEE
Q 017868          249 QKAMGTGIDVSFDCAGLNKTMSTALGATCAGGKVCLV  285 (365)
Q Consensus       249 ~~~~~~~~d~vid~~g~~~~~~~~~~~l~~~G~~~~~  285 (365)
                         ...+||.|+-..+.+......++.|++||+++..
T Consensus       131 ---~~~pfD~Iiv~~a~~~ip~~l~~qLk~GGrLV~p  164 (224)
T d1vbfa_         131 ---EEKPYDRVVVWATAPTLLCKPYEQLKEGGIMILP  164 (224)
T ss_dssp             ---GGCCEEEEEESSBBSSCCHHHHHTEEEEEEEEEE
T ss_pred             ---hhhhHHHHHhhcchhhhhHHHHHhcCCCCEEEEE
Confidence               1367999987655544556678899999999874

>d2ag5a1 c.2.1.2 (A:1-245) Dehydrogenase/reductase SDR family member 6, DHRS6 {Human (Homo sapiens) [TaxId: 9606]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Tyrosine-dependent oxidoreductases
domain: Dehydrogenase/reductase SDR family member 6, DHRS6
species: Human (Homo sapiens) [TaxId: 9606]

Probab=97.06  E-value=0.001  Score=54.64  Aligned_cols=78  Identities=17%  Similarity=0.308  Sum_probs=53.7

Q ss_pred             CCCEEEEEcC-CHHHHHHHHHHHHHCCCCeEEEEeCChhHHHHHHHcCCCEEEeCCCCcccHHHHHHHHHHHhCCCceEE
Q 017868          181 PETNVLIMGA-GPIGLVTMLGAPRAFGAPRIVIVDVDDYRLSVAKEIGADNIVKVSTNLQDIAEEVEKIQKAMGTGIDVS  259 (365)
Q Consensus       181 ~g~~vlI~G~-g~~G~~ai~~l~~~~g~~~vi~v~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~i~~~~~~~~~~~d~v  259 (365)
                      +|+++||+|+ +++|.++++.+ ...|+ +|+.+++++++.+.+.+.........+...++   .+....+. -.++|++
T Consensus         5 ~gK~alITGas~GIG~aia~~l-a~~G~-~Vi~~~r~~~~l~~~~~~~~~~~~~~d~~~~~---~~~~~~~~-~~~id~l   78 (245)
T d2ag5a1           5 DGKVIILTAAAQGIGQAAALAF-AREGA-KVIATDINESKLQELEKYPGIQTRVLDVTKKK---QIDQFANE-VERLDVL   78 (245)
T ss_dssp             TTCEEEESSTTSHHHHHHHHHH-HHTTC-EEEEEESCHHHHGGGGGSTTEEEEECCTTCHH---HHHHHHHH-CSCCSEE
T ss_pred             CCCEEEEeCCCCHHHHHHHHHH-HHcCC-EEEEEeCCHHHHHHHHhccCCceeeeeccccc---cccccccc-cccceeE
Confidence            6789999987 99999999955 45599 68888899888776655444444444433333   33333332 4689999


Q ss_pred             EeCCC
Q 017868          260 FDCAG  264 (365)
Q Consensus       260 id~~g  264 (365)
                      +++.|
T Consensus        79 Vn~ag   83 (245)
T d2ag5a1          79 FNVAG   83 (245)
T ss_dssp             EECCC
T ss_pred             Eeccc
Confidence            99887

>d1pjqa1 c.2.1.11 (A:1-113) Siroheme synthase CysG, domain 1 {Salmonella typhimurium [TaxId: 90371]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Siroheme synthase N-terminal domain-like
domain: Siroheme synthase CysG, domain 1
species: Salmonella typhimurium [TaxId: 90371]

Probab=97.03  E-value=0.007  Score=42.85  Aligned_cols=92  Identities=13%  Similarity=-0.018  Sum_probs=58.7

Q ss_pred             CCCEEEEEcCCHHHHHHHHHHHHHCCCCeEEEEeCCh--hHHHHHHHcCCCEEEeCCCCcccHHHHHHHHHHHhCCCceE
Q 017868          181 PETNVLIMGAGPIGLVTMLGAPRAFGAPRIVIVDVDD--YRLSVAKEIGADNIVKVSTNLQDIAEEVEKIQKAMGTGIDV  258 (365)
Q Consensus       181 ~g~~vlI~G~g~~G~~ai~~l~~~~g~~~vi~v~~~~--~~~~~~~~~g~~~~~~~~~~~~~~~~~i~~~~~~~~~~~d~  258 (365)
                      .|.+|||.|+|.+|..-++ .+...|++ +++++...  +-..+++.-.... +.-.-...+            -.++++
T Consensus        11 ~~k~vlVvG~G~va~~ka~-~ll~~ga~-v~v~~~~~~~~~~~~~~~~~i~~-~~~~~~~~d------------l~~~~l   75 (113)
T d1pjqa1          11 RDRDCLIVGGGDVAERKAR-LLLEAGAR-LTVNALTFIPQFTVWANEGMLTL-VEGPFDETL------------LDSCWL   75 (113)
T ss_dssp             BTCEEEEECCSHHHHHHHH-HHHHTTBE-EEEEESSCCHHHHHHHTTTSCEE-EESSCCGGG------------GTTCSE
T ss_pred             CCCEEEEECCCHHHHHHHH-HHHHCCCe-EEEEeccCChHHHHHHhcCCcee-eccCCCHHH------------hCCCcE
Confidence            5789999999999999999 66677995 55553332  3333443322322 221111112            157899


Q ss_pred             EEeCCCCHHHHHHHHHhcccCCEEEEEcc
Q 017868          259 SFDCAGLNKTMSTALGATCAGGKVCLVGM  287 (365)
Q Consensus       259 vid~~g~~~~~~~~~~~l~~~G~~~~~g~  287 (365)
                      |+-+++....-.......+..|..+.+..
T Consensus        76 v~~at~d~~~n~~i~~~a~~~~ilVNv~D  104 (113)
T d1pjqa1          76 AIAATDDDTVNQRVSDAAESRRIFCNVVD  104 (113)
T ss_dssp             EEECCSCHHHHHHHHHHHHHTTCEEEETT
T ss_pred             EeecCCCHHHHHHHHHHHHHcCCEEEeCC
Confidence            99999987555567777888888877643

>d1pr9a_ c.2.1.2 (A:) Carbonyl reductase {Human (Homo sapiens) [TaxId: 9606]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Tyrosine-dependent oxidoreductases
domain: Carbonyl reductase
species: Human (Homo sapiens) [TaxId: 9606]

Probab=97.03  E-value=0.0024  Score=52.32  Aligned_cols=78  Identities=27%  Similarity=0.268  Sum_probs=54.6

Q ss_pred             CCCEEEEEcC-CHHHHHHHHHHHHHCCCCeEEEEeCChhHHH-HHHHcCCCEEEeCCCCcccHHHHHHHHHHHhCCCceE
Q 017868          181 PETNVLIMGA-GPIGLVTMLGAPRAFGAPRIVIVDVDDYRLS-VAKEIGADNIVKVSTNLQDIAEEVEKIQKAMGTGIDV  258 (365)
Q Consensus       181 ~g~~vlI~G~-g~~G~~ai~~l~~~~g~~~vi~v~~~~~~~~-~~~~~g~~~~~~~~~~~~~~~~~i~~~~~~~~~~~d~  258 (365)
                      +|+++||+|+ +++|.++++.+ ...|+ +|+.+++++++.+ +.++++....+..+-.++   +.++++.+.. +++|+
T Consensus         6 ~GK~~lITGas~GIG~aia~~l-a~~G~-~V~~~~r~~~~l~~~~~~~~~~~~~~~Dv~d~---~~v~~~~~~~-g~iDi   79 (244)
T d1pr9a_           6 AGRRVLVTGAGKGIGRGTVQAL-HATGA-RVVAVSRTQADLDSLVRECPGIEPVCVDLGDW---EATERALGSV-GPVDL   79 (244)
T ss_dssp             TTCEEEEESTTSHHHHHHHHHH-HHTTC-EEEEEESCHHHHHHHHHHSTTCEEEECCTTCH---HHHHHHHTTC-CCCCE
T ss_pred             CCCEEEEeCCCCHHHHHHHHHH-HHcCC-EEEEEECCHHHHHHHHHhcCCCeEEEEeCCCH---HHHHHHHHHh-CCceE
Confidence            6899999987 99999999945 45699 6888888888766 446666544444433222   2344444332 58999


Q ss_pred             EEeCCC
Q 017868          259 SFDCAG  264 (365)
Q Consensus       259 vid~~g  264 (365)
                      +++++|
T Consensus        80 lVnnAg   85 (244)
T d1pr9a_          80 LVNNAA   85 (244)
T ss_dssp             EEECCC
T ss_pred             EEeccc
Confidence            999887

>d1i1na_ c.66.1.7 (A:) Protein-L-isoaspartyl O-methyltransferase {Human (Homo sapiens) [TaxId: 9606]}

class: Alpha and beta proteins (a/b)
fold: S-adenosyl-L-methionine-dependent methyltransferases
superfamily: S-adenosyl-L-methionine-dependent methyltransferases
family: Protein-L-isoaspartyl O-methyltransferase
domain: Protein-L-isoaspartyl O-methyltransferase
species: Human (Homo sapiens) [TaxId: 9606]

Probab=97.02  E-value=0.0005  Score=55.73  Aligned_cols=104  Identities=15%  Similarity=0.132  Sum_probs=65.9

Q ss_pred             HHHHHhc--CCCCCCEEEEEcCCHHHHHHHHHHHHHCC-CCeEEEEeCChhHHHHHH----HcCC-----CEEEeCCCC-
Q 017868          171 LHACRRA--NIGPETNVLIMGAGPIGLVTMLGAPRAFG-APRIVIVDVDDYRLSVAK----EIGA-----DNIVKVSTN-  237 (365)
Q Consensus       171 ~~~~~~~--~~~~g~~vlI~G~g~~G~~ai~~l~~~~g-~~~vi~v~~~~~~~~~~~----~~g~-----~~~~~~~~~-  237 (365)
                      ...++..  .+++|++||-.|+|. |..++. +++..| ...|++++.+++-.+.++    +.+.     ..+.....+ 
T Consensus        64 a~~le~L~~~l~~g~~VLdiG~Gs-Gy~ta~-la~l~~~~g~V~~ie~~~~l~~~a~~~l~~~~~~~~~~~~~~~~~gD~  141 (224)
T d1i1na_          64 AYALELLFDQLHEGAKALDVGSGS-GILTAC-FARMVGCTGKVIGIDHIKELVDDSVNNVRKDDPTLLSSGRVQLVVGDG  141 (224)
T ss_dssp             HHHHHHTTTTSCTTCEEEEETCTT-SHHHHH-HHHHHCTTCEEEEEESCHHHHHHHHHHHHHHCTHHHHTSSEEEEESCG
T ss_pred             HHHHHHHhhccCCCCeEEEecCCC-CHHHHH-HHHHhCCCceEEEEcCCHHHHHHHHHhccccCcccccccceEEEEeec
Confidence            3445543  789999999999864 666666 666655 337999999987665543    2222     111111011 


Q ss_pred             cccHHHHHHHHHHHhCCCceEEEeCCCCHHHHHHHHHhcccCCEEEEE
Q 017868          238 LQDIAEEVEKIQKAMGTGIDVSFDCAGLNKTMSTALGATCAGGKVCLV  285 (365)
Q Consensus       238 ~~~~~~~i~~~~~~~~~~~d~vid~~g~~~~~~~~~~~l~~~G~~~~~  285 (365)
                      ...+         .....||.|+.+..........++.|++||+++..
T Consensus       142 ~~~~---------~~~~~fD~I~~~~~~~~ip~~l~~~LkpGG~LV~p  180 (224)
T d1i1na_         142 RMGY---------AEEAPYDAIHVGAAAPVVPQALIDQLKPGGRLILP  180 (224)
T ss_dssp             GGCC---------GGGCCEEEEEECSBBSSCCHHHHHTEEEEEEEEEE
T ss_pred             cccc---------chhhhhhhhhhhcchhhcCHHHHhhcCCCcEEEEE
Confidence            0011         01368999998766554556788999999999874

>d1ae1a_ c.2.1.2 (A:) Tropinone reductase {Jimsonweed (Datura stramonium), I [TaxId: 4076]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Tyrosine-dependent oxidoreductases
domain: Tropinone reductase
species: Jimsonweed (Datura stramonium), I [TaxId: 4076]

Probab=97.02  E-value=0.0033  Score=51.94  Aligned_cols=83  Identities=16%  Similarity=0.246  Sum_probs=54.8

Q ss_pred             CCCEEEEEcC-CHHHHHHHHHHHHHCCCCeEEEEeCChhHHH----HHHHcCCCE-EEeCCCCc-ccHHHHHHHHHHHhC
Q 017868          181 PETNVLIMGA-GPIGLVTMLGAPRAFGAPRIVIVDVDDYRLS----VAKEIGADN-IVKVSTNL-QDIAEEVEKIQKAMG  253 (365)
Q Consensus       181 ~g~~vlI~G~-g~~G~~ai~~l~~~~g~~~vi~v~~~~~~~~----~~~~~g~~~-~~~~~~~~-~~~~~~i~~~~~~~~  253 (365)
                      +|+++||+|+ +++|.+.++.+ ...|+ +|+.+++++++.+    .+++.+... .+..+-.+ ++..+.+.++.+..+
T Consensus         5 ~gK~alITGas~GIG~aia~~l-a~~G~-~V~i~~r~~~~l~~~~~~~~~~~~~~~~~~~D~s~~~~~~~~~~~~~~~~~   82 (258)
T d1ae1a_           5 KGTTALVTGGSKGIGYAIVEEL-AGLGA-RVYTCSRNEKELDECLEIWREKGLNVEGSVCDLLSRTERDKLMQTVAHVFD   82 (258)
T ss_dssp             TTCEEEEESCSSHHHHHHHHHH-HHTTC-EEEEEESCHHHHHHHHHHHHHTTCCEEEEECCTTCHHHHHHHHHHHHHHTT
T ss_pred             CCCEEEEeCCCCHHHHHHHHHH-HHCCC-EEEEEECCHHHHHHHHHHHHhcCCCceEEEeecCCHHHHHHHHHHHHHHhC
Confidence            6889999987 99999999845 46699 6888888886644    344455433 23333322 333334444544445


Q ss_pred             CCceEEEeCCCC
Q 017868          254 TGIDVSFDCAGL  265 (365)
Q Consensus       254 ~~~d~vid~~g~  265 (365)
                      +..|+++.++|.
T Consensus        83 g~idilinnag~   94 (258)
T d1ae1a_          83 GKLNILVNNAGV   94 (258)
T ss_dssp             SCCCEEEECCCC
T ss_pred             CCcEEEeccccc
Confidence            679999998873

>d2ae2a_ c.2.1.2 (A:) Tropinone reductase {Jimsonweed (Datura stramonium), II [TaxId: 4076]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Tyrosine-dependent oxidoreductases
domain: Tropinone reductase
species: Jimsonweed (Datura stramonium), II [TaxId: 4076]

Probab=96.92  E-value=0.0026  Score=52.61  Aligned_cols=82  Identities=13%  Similarity=0.194  Sum_probs=53.3

Q ss_pred             CCCEEEEEcC-CHHHHHHHHHHHHHCCCCeEEEEeCChhHHHHH----HHcCCCE-EEeCCC-CcccHHHHHHHHHHHhC
Q 017868          181 PETNVLIMGA-GPIGLVTMLGAPRAFGAPRIVIVDVDDYRLSVA----KEIGADN-IVKVST-NLQDIAEEVEKIQKAMG  253 (365)
Q Consensus       181 ~g~~vlI~G~-g~~G~~ai~~l~~~~g~~~vi~v~~~~~~~~~~----~~~g~~~-~~~~~~-~~~~~~~~i~~~~~~~~  253 (365)
                      +|+++||+|+ +++|.++++.++ ..|+ +|+.+++++++.+.+    ++.+... .+..+- +.++..+.+.+..+..+
T Consensus         7 ~GK~alITGas~GIG~aia~~la-~~Ga-~V~~~~r~~~~l~~~~~~~~~~g~~~~~~~~Dv~~~~~v~~~~~~~~~~~~   84 (259)
T d2ae2a_           7 EGCTALVTGGSRGIGYGIVEELA-SLGA-SVYTCSRNQKELNDCLTQWRSKGFKVEASVCDLSSRSERQELMNTVANHFH   84 (259)
T ss_dssp             TTCEEEEESCSSHHHHHHHHHHH-HTTC-EEEEEESCHHHHHHHHHHHHHTTCEEEEEECCTTCHHHHHHHHHHHHHHTT
T ss_pred             CCCEEEEeCCCCHHHHHHHHHHH-HCCC-EEEEEECCHHHHHHHHHHHHhcCCCceEEEeeCCCHHHHHHHHHHHHHHhC
Confidence            6889999987 999999999555 5699 678888888776432    3334322 222222 22333444444444445


Q ss_pred             CCceEEEeCCC
Q 017868          254 TGIDVSFDCAG  264 (365)
Q Consensus       254 ~~~d~vid~~g  264 (365)
                      .++|++++++|
T Consensus        85 ~~idilvnnAG   95 (259)
T d2ae2a_          85 GKLNILVNNAG   95 (259)
T ss_dssp             TCCCEEEECCC
T ss_pred             CCceEEEECCc
Confidence            67999999988

>d1xq1a_ c.2.1.2 (A:) Tropinone reductase {Thale cress (Arabidopsis thaliana) [TaxId: 3702]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Tyrosine-dependent oxidoreductases
domain: Tropinone reductase
species: Thale cress (Arabidopsis thaliana) [TaxId: 3702]

Probab=96.92  E-value=0.002  Score=53.37  Aligned_cols=83  Identities=18%  Similarity=0.260  Sum_probs=53.6

Q ss_pred             CCCEEEEEcC-CHHHHHHHHHHHHHCCCCeEEEEeCChhHHHHH-H---HcCCCE-EEeCCC-CcccHHHHHHHHHHHhC
Q 017868          181 PETNVLIMGA-GPIGLVTMLGAPRAFGAPRIVIVDVDDYRLSVA-K---EIGADN-IVKVST-NLQDIAEEVEKIQKAMG  253 (365)
Q Consensus       181 ~g~~vlI~G~-g~~G~~ai~~l~~~~g~~~vi~v~~~~~~~~~~-~---~~g~~~-~~~~~~-~~~~~~~~i~~~~~~~~  253 (365)
                      +|+++||+|+ +++|.++++.++ ..|+ +|+.+++++++.+.+ +   +.+... .+..+- +.++..+.+++..+..+
T Consensus         7 kgK~alVTGas~GIG~aiA~~la-~~Ga-~V~~~~r~~~~l~~~~~~~~~~~~~~~~~~~Dv~~~~~v~~~~~~~~~~~~   84 (259)
T d1xq1a_           7 KAKTVLVTGGTKGIGHAIVEEFA-GFGA-VIHTCARNEYELNECLSKWQKKGFQVTGSVCDASLRPEREKLMQTVSSMFG   84 (259)
T ss_dssp             TTCEEEETTTTSHHHHHHHHHHH-HTTC-EEEEEESCHHHHHHHHHHHHHTTCCEEEEECCTTSHHHHHHHHHHHHHHHT
T ss_pred             CCCEEEEeCCCCHHHHHHHHHHH-HCCC-EEEEEECCHHHHHHHHHHHHhcCCceEEEeccCCCHHHHHHHHHHHHHHhC
Confidence            5889999987 999999999454 5699 678888888765432 3   233321 222222 22344444555544445


Q ss_pred             CCceEEEeCCCC
Q 017868          254 TGIDVSFDCAGL  265 (365)
Q Consensus       254 ~~~d~vid~~g~  265 (365)
                      +.+|++++++|.
T Consensus        85 g~idilvnnAG~   96 (259)
T d1xq1a_          85 GKLDILINNLGA   96 (259)
T ss_dssp             TCCSEEEEECCC
T ss_pred             CCcccccccccc
Confidence            679999999884

>d1i9ga_ c.66.1.13 (A:) Probable methyltransferase Rv2118c {Mycobacterium tuberculosis [TaxId: 1773]}

class: Alpha and beta proteins (a/b)
fold: S-adenosyl-L-methionine-dependent methyltransferases
superfamily: S-adenosyl-L-methionine-dependent methyltransferases
family: tRNA(1-methyladenosine) methyltransferase-like
domain: Probable methyltransferase Rv2118c
species: Mycobacterium tuberculosis [TaxId: 1773]

Probab=96.88  E-value=0.0021  Score=53.02  Aligned_cols=105  Identities=22%  Similarity=0.266  Sum_probs=69.0

Q ss_pred             HHHHhcCCCCCCEEEEEcCCHHHHHHHHHHHHHCCC-CeEEEEeCChhHHHHHHH----cC---CCEEEeCCCCcccHHH
Q 017868          172 HACRRANIGPETNVLIMGAGPIGLVTMLGAPRAFGA-PRIVIVDVDDYRLSVAKE----IG---ADNIVKVSTNLQDIAE  243 (365)
Q Consensus       172 ~~~~~~~~~~g~~vlI~G~g~~G~~ai~~l~~~~g~-~~vi~v~~~~~~~~~~~~----~g---~~~~~~~~~~~~~~~~  243 (365)
                      ..+...+++||++||=.|+|. |.+++. +|+..|. .++++++.+++..+.+++    ++   .+.+.....   |..+
T Consensus        87 ~Ii~~l~i~PG~~VLE~G~Gs-G~lt~~-La~~vgp~G~V~~~d~~~~~~~~Ar~n~~~~~~~~~~nv~~~~~---d~~~  161 (264)
T d1i9ga_          87 QIVHEGDIFPGARVLEAGAGS-GALTLS-LLRAVGPAGQVISYEQRADHAEHARRNVSGCYGQPPDNWRLVVS---DLAD  161 (264)
T ss_dssp             HHHHHTTCCTTCEEEEECCTT-SHHHHH-HHHHHCTTSEEEEECSCHHHHHHHHHHHHHHHTSCCTTEEEECS---CGGG
T ss_pred             HHHHHhCCCCCCEEEecCcCC-cHHHHH-HHHhhCCCcEEEEecCCHHHHHHHHHhhhhhccCCCceEEEEec---cccc
Confidence            345778999999999998764 667777 7777664 389999999988777654    21   222222111   1111


Q ss_pred             HHHHHHHHhCCCceEEE-eCCCCHHHHHHHHHhcccCCEEEEEc
Q 017868          244 EVEKIQKAMGTGIDVSF-DCAGLNKTMSTALGATCAGGKVCLVG  286 (365)
Q Consensus       244 ~i~~~~~~~~~~~d~vi-d~~g~~~~~~~~~~~l~~~G~~~~~g  286 (365)
                      .     ......+|.|| |.......+..+.++|+++|+++.+.
T Consensus       162 ~-----~~~~~~fDaV~ldlp~P~~~l~~~~~~LkpGG~lv~~~  200 (264)
T d1i9ga_         162 S-----ELPDGSVDRAVLDMLAPWEVLDAVSRLLVAGGVLMVYV  200 (264)
T ss_dssp             C-----CCCTTCEEEEEEESSCGGGGHHHHHHHEEEEEEEEEEE
T ss_pred             c-----cccCCCcceEEEecCCHHHHHHHHHhccCCCCEEEEEe
Confidence            0     01146789665 44333457778999999999998874

>d1cyda_ c.2.1.2 (A:) Carbonyl reductase {Mouse (Mus musculus) [TaxId: 10090]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Tyrosine-dependent oxidoreductases
domain: Carbonyl reductase
species: Mouse (Mus musculus) [TaxId: 10090]

Probab=96.87  E-value=0.0039  Score=50.91  Aligned_cols=78  Identities=27%  Similarity=0.219  Sum_probs=53.5

Q ss_pred             CCCEEEEEcC-CHHHHHHHHHHHHHCCCCeEEEEeCChhHHH-HHHHcCCCEEEeCCCCcccHHHHHHHHHHHhCCCceE
Q 017868          181 PETNVLIMGA-GPIGLVTMLGAPRAFGAPRIVIVDVDDYRLS-VAKEIGADNIVKVSTNLQDIAEEVEKIQKAMGTGIDV  258 (365)
Q Consensus       181 ~g~~vlI~G~-g~~G~~ai~~l~~~~g~~~vi~v~~~~~~~~-~~~~~g~~~~~~~~~~~~~~~~~i~~~~~~~~~~~d~  258 (365)
                      +|+++||+|+ +++|.++++.+ ...|+ +|+.+++++++.+ +.++++....+..+-.++   +.+++..+. -+++|+
T Consensus         4 ~GK~alITGas~GIG~aia~~l-a~~Ga-~V~~~~r~~~~l~~~~~~~~~~~~~~~Dv~~~---~~v~~~~~~-~g~iDi   77 (242)
T d1cyda_           4 SGLRALVTGAGKGIGRDTVKAL-HASGA-KVVAVTRTNSDLVSLAKECPGIEPVCVDLGDW---DATEKALGG-IGPVDL   77 (242)
T ss_dssp             TTCEEEEESTTSHHHHHHHHHH-HHTTC-EEEEEESCHHHHHHHHHHSTTCEEEECCTTCH---HHHHHHHTT-CCCCSE
T ss_pred             CCCEEEEeCCCcHHHHHHHHHH-HHCCC-EEEEEECCHHHHHHHHHhcCCCeEEEEeCCCH---HHHHHHHHH-cCCCeE
Confidence            5889999987 99999999945 46699 5788888877764 456665444444333222   234444432 258999


Q ss_pred             EEeCCC
Q 017868          259 SFDCAG  264 (365)
Q Consensus       259 vid~~g  264 (365)
                      ++.++|
T Consensus        78 lVnnAg   83 (242)
T d1cyda_          78 LVNNAA   83 (242)
T ss_dssp             EEECCC
T ss_pred             EEECCc
Confidence            999887

>d1kpia_ c.66.1.18 (A:) CmaA2 {Mycobacterium tuberculosis [TaxId: 1773]}

class: Alpha and beta proteins (a/b)
fold: S-adenosyl-L-methionine-dependent methyltransferases
superfamily: S-adenosyl-L-methionine-dependent methyltransferases
family: Mycolic acid cyclopropane synthase
domain: CmaA2
species: Mycobacterium tuberculosis [TaxId: 1773]

Probab=96.86  E-value=0.0042  Score=52.16  Aligned_cols=100  Identities=14%  Similarity=0.173  Sum_probs=67.3

Q ss_pred             HHhcCCCCCCEEEEEcCCHHHHHHHHHHHHHCCCCeEEEEeCChhHHHH----HHHcCCCEEEeCCCCcccHHHHHHHHH
Q 017868          174 CRRANIGPETNVLIMGAGPIGLVTMLGAPRAFGAPRIVIVDVDDYRLSV----AKEIGADNIVKVSTNLQDIAEEVEKIQ  249 (365)
Q Consensus       174 ~~~~~~~~g~~vlI~G~g~~G~~ai~~l~~~~g~~~vi~v~~~~~~~~~----~~~~g~~~~~~~~~~~~~~~~~i~~~~  249 (365)
                      +++.++++|++||=+|+|- |..+.. +++..|+ .+++++.+++..+.    ++..|....+....  .++.       
T Consensus        54 ~~~l~l~~G~~VLDiGCG~-G~~~~~-~a~~~g~-~v~git~s~~q~~~a~~~~~~~~l~~~v~~~~--~d~~-------  121 (291)
T d1kpia_          54 LDKLNLEPGMTLLDIGCGW-GSTMRH-AVAEYDV-NVIGLTLSENQYAHDKAMFDEVDSPRRKEVRI--QGWE-------  121 (291)
T ss_dssp             HHTTCCCTTCEEEEETCTT-SHHHHH-HHHHHCC-EEEEEESCHHHHHHHHHHHHHSCCSSCEEEEE--CCGG-------
T ss_pred             HHhcCCCCCCEEEEecCcc-hHHHHH-HHHhcCc-ceeeccchHHHHHHHHHHHHhhccchhhhhhh--hccc-------
Confidence            4778999999999999863 445666 6777798 78899999887554    44456543222111  1211       


Q ss_pred             HHhCCCceEEEe-----CCCC----------HHHHHHHHHhcccCCEEEEEc
Q 017868          250 KAMGTGIDVSFD-----CAGL----------NKTMSTALGATCAGGKVCLVG  286 (365)
Q Consensus       250 ~~~~~~~d~vid-----~~g~----------~~~~~~~~~~l~~~G~~~~~g  286 (365)
                       ...+.+|.|+.     .++.          +..+..+.++|+|+|++++..
T Consensus       122 -~~~~~fD~i~sie~~eH~~~~~~~~~~~~~~~~f~~i~~~LkpgG~~~l~~  172 (291)
T d1kpia_         122 -EFDEPVDRIVSLGAFEHFADGAGDAGFERYDTFFKKFYNLTPDDGRMLLHT  172 (291)
T ss_dssp             -GCCCCCSEEEEESCGGGTTCCSSCCSTTHHHHHHHHHHHTSCTTCEEEEEE
T ss_pred             -ccccccceEeechhHHhcchhhhhhHHHHHHHHHHHHHHhCCCCCceEEEE
Confidence             12468998865     3332          246778889999999998754

>d1nffa_ c.2.1.2 (A:) Putative oxidoreductase Rv2002 {Mycobacterium tuberculosis [TaxId: 1773]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Tyrosine-dependent oxidoreductases
domain: Putative oxidoreductase Rv2002
species: Mycobacterium tuberculosis [TaxId: 1773]

Probab=96.84  E-value=0.004  Score=50.86  Aligned_cols=83  Identities=22%  Similarity=0.258  Sum_probs=55.4

Q ss_pred             CCCCEEEEEcC-CHHHHHHHHHHHHHCCCCeEEEEeCChhHHH-HHHHcCCCEE-EeCCC-CcccHHHHHHHHHHHhCCC
Q 017868          180 GPETNVLIMGA-GPIGLVTMLGAPRAFGAPRIVIVDVDDYRLS-VAKEIGADNI-VKVST-NLQDIAEEVEKIQKAMGTG  255 (365)
Q Consensus       180 ~~g~~vlI~G~-g~~G~~ai~~l~~~~g~~~vi~v~~~~~~~~-~~~~~g~~~~-~~~~~-~~~~~~~~i~~~~~~~~~~  255 (365)
                      -+|+++||+|+ +++|.++++.+ ...|+ +|+.+++++++.+ +.++++.... +..+- +.++..+.++++.+.. ++
T Consensus         4 L~gK~alITGas~GIG~aia~~l-a~~G~-~V~~~~r~~~~~~~~~~~~~~~~~~~~~Dv~~~~~v~~~~~~~~~~~-g~   80 (244)
T d1nffa_           4 LTGKVALVSGGARGMGASHVRAM-VAEGA-KVVFGDILDEEGKAMAAELADAARYVHLDVTQPAQWKAAVDTAVTAF-GG   80 (244)
T ss_dssp             TTTCEEEEETTTSHHHHHHHHHH-HHTTC-EEEEEESCHHHHHHHHHHTGGGEEEEECCTTCHHHHHHHHHHHHHHH-SC
T ss_pred             cCCCEEEEeCCCCHHHHHHHHHH-HHCCC-EEEEEECCHHHHHHHHHHhhCcceEEEeecCCHHHHHHHHHHHHHHh-CC
Confidence            36789999987 99999999945 46699 6788888888775 4466653322 22222 2334444455554433 57


Q ss_pred             ceEEEeCCCC
Q 017868          256 IDVSFDCAGL  265 (365)
Q Consensus       256 ~d~vid~~g~  265 (365)
                      +|+++.++|.
T Consensus        81 idilinnAG~   90 (244)
T d1nffa_          81 LHVLVNNAGI   90 (244)
T ss_dssp             CCEEEECCCC
T ss_pred             CeEEEECCcc
Confidence            9999999883

>d1kpga_ c.66.1.18 (A:) CmaA1 {Mycobacterium tuberculosis [TaxId: 1773]}

class: Alpha and beta proteins (a/b)
fold: S-adenosyl-L-methionine-dependent methyltransferases
superfamily: S-adenosyl-L-methionine-dependent methyltransferases
family: Mycolic acid cyclopropane synthase
domain: CmaA1
species: Mycobacterium tuberculosis [TaxId: 1773]

Probab=96.82  E-value=0.0043  Score=51.87  Aligned_cols=100  Identities=16%  Similarity=0.146  Sum_probs=66.8

Q ss_pred             HHhcCCCCCCEEEEEcCCHHHHHHHHHHHHHCCCCeEEEEeCChhHHHHHHH----cCCCEEEeCCCCcccHHHHHHHHH
Q 017868          174 CRRANIGPETNVLIMGAGPIGLVTMLGAPRAFGAPRIVIVDVDDYRLSVAKE----IGADNIVKVSTNLQDIAEEVEKIQ  249 (365)
Q Consensus       174 ~~~~~~~~g~~vlI~G~g~~G~~ai~~l~~~~g~~~vi~v~~~~~~~~~~~~----~g~~~~~~~~~~~~~~~~~i~~~~  249 (365)
                      +++.++++|++||=+|+|- |..++. +++..|+ .|++++.+++..+.+++    .|....+.+..  .++.    +  
T Consensus        55 ~~~l~l~~G~~VLDiGCG~-G~~a~~-~a~~~g~-~v~git~s~~Q~~~a~~~~~~~g~~~~v~~~~--~d~~----~--  123 (285)
T d1kpga_          55 LGKLGLQPGMTLLDVGCGW-GATMMR-AVEKYDV-NVVGLTLSKNQANHVQQLVANSENLRSKRVLL--AGWE----Q--  123 (285)
T ss_dssp             HTTTTCCTTCEEEEETCTT-SHHHHH-HHHHHCC-EEEEEESCHHHHHHHHHHHHTCCCCSCEEEEE--SCGG----G--
T ss_pred             HHHcCCCCCCEEEEecCcc-hHHHHH-HHhcCCc-ceEEEeccHHHHHHHHHHHHhhhhhhhhHHHH--hhhh----c--
Confidence            3678899999999999864 666777 7777798 78999999987776644    33221111111  1221    1  


Q ss_pred             HHhCCCceEEEe-----CCCC---HHHHHHHHHhcccCCEEEEEc
Q 017868          250 KAMGTGIDVSFD-----CAGL---NKTMSTALGATCAGGKVCLVG  286 (365)
Q Consensus       250 ~~~~~~~d~vid-----~~g~---~~~~~~~~~~l~~~G~~~~~g  286 (365)
                        ....+|.|+.     .++.   ...+..+.++|+|+|++++..
T Consensus       124 --~~~~fD~i~si~~~eh~~~~~~~~~~~~~~r~LkpgG~~~l~~  166 (285)
T d1kpga_         124 --FDEPVDRIVSIGAFEHFGHERYDAFFSLAHRLLPADGVMLLHT  166 (285)
T ss_dssp             --CCCCCSEEEEESCGGGTCTTTHHHHHHHHHHHSCTTCEEEEEE
T ss_pred             --ccccccceeeehhhhhcCchhHHHHHHHHHhhcCCCCcEEEEE
Confidence              1467888765     4443   245667889999999998754

>d1luaa1 c.2.1.7 (A:98-288) Methylene-tetrahydromethanopterin dehydrogenase {Methylobacterium extorquens [TaxId: 408]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Aminoacid dehydrogenase-like, C-terminal domain
domain: Methylene-tetrahydromethanopterin dehydrogenase
species: Methylobacterium extorquens [TaxId: 408]

Probab=96.78  E-value=0.00084  Score=52.91  Aligned_cols=76  Identities=13%  Similarity=0.257  Sum_probs=49.5

Q ss_pred             CCCCCEEEEEcC-CHHHHHHHHHHHHHCCCCeEEEEeCChhHHHHH-HHc----CCC-EEEeCCCCcccHHHHHHHHHHH
Q 017868          179 IGPETNVLIMGA-GPIGLVTMLGAPRAFGAPRIVIVDVDDYRLSVA-KEI----GAD-NIVKVSTNLQDIAEEVEKIQKA  251 (365)
Q Consensus       179 ~~~g~~vlI~G~-g~~G~~ai~~l~~~~g~~~vi~v~~~~~~~~~~-~~~----g~~-~~~~~~~~~~~~~~~i~~~~~~  251 (365)
                      --+|+++||+|+ |++|..+++ .+...|+ +|+.++++.++.+.+ +++    ... ...+..    + .+.+++.   
T Consensus        20 ~l~gK~vlItGasgGIG~~ia~-~la~~G~-~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~d~~----~-~~~~~~~---   89 (191)
T d1luaa1          20 SVKGKKAVVLAGTGPVGMRSAA-LLAGEGA-EVVLCGRKLDKAQAAADSVNKRFKVNVTAAETA----D-DASRAEA---   89 (191)
T ss_dssp             CCTTCEEEEETTTSHHHHHHHH-HHHHTTC-EEEEEESSHHHHHHHHHHHHHHHTCCCEEEECC----S-HHHHHHH---
T ss_pred             CCCCCEEEEECCCHHHHHHHHH-HHHhhcc-chhhcccchHHHHHHHHHHHhccchhhhhhhcc----c-HHHHHHH---
Confidence            348899999987 999999999 4456699 678888888776433 322    221 122221    1 1233333   


Q ss_pred             hCCCceEEEeCCCC
Q 017868          252 MGTGIDVSFDCAGL  265 (365)
Q Consensus       252 ~~~~~d~vid~~g~  265 (365)
                       -+++|++|.++|.
T Consensus        90 -~~~iDilin~Ag~  102 (191)
T d1luaa1          90 -VKGAHFVFTAGAI  102 (191)
T ss_dssp             -TTTCSEEEECCCT
T ss_pred             -hcCcCeeeecCcc
Confidence             3579999999873

>d1w6ua_ c.2.1.2 (A:) 2,4-dienoyl-CoA reductase, mitochondrial (DECR) {Human (Homo sapiens), [TaxId: 9606]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Tyrosine-dependent oxidoreductases
domain: 2,4-dienoyl-CoA reductase, mitochondrial (DECR)
species: Human (Homo sapiens), [TaxId: 9606]

Probab=96.77  E-value=0.0062  Score=51.17  Aligned_cols=81  Identities=15%  Similarity=0.183  Sum_probs=51.7

Q ss_pred             CCCEEEEEcC-CHHHHHHHHHHHHHCCCCeEEEEeCChhHHH-----HHHHcCCCE-EEeCCCCcc-cHHHHHHHHHHHh
Q 017868          181 PETNVLIMGA-GPIGLVTMLGAPRAFGAPRIVIVDVDDYRLS-----VAKEIGADN-IVKVSTNLQ-DIAEEVEKIQKAM  252 (365)
Q Consensus       181 ~g~~vlI~G~-g~~G~~ai~~l~~~~g~~~vi~v~~~~~~~~-----~~~~~g~~~-~~~~~~~~~-~~~~~i~~~~~~~  252 (365)
                      +|+++||+|+ +++|.+++..++ ..|+ +|+.+++++++.+     +.++.|... .+..+-.++ +.........+ .
T Consensus        24 ~gK~alITGas~GIG~aiA~~la-~~Ga-~Vii~~r~~~~l~~~~~~l~~~~g~~~~~~~~D~~~~~~v~~~~~~~~~-~  100 (294)
T d1w6ua_          24 QGKVAFITGGGTGLGKGMTTLLS-SLGA-QCVIASRKMDVLKATAEQISSQTGNKVHAIQCDVRDPDMVQNTVSELIK-V  100 (294)
T ss_dssp             TTCEEEEETTTSHHHHHHHHHHH-HTTC-EEEEEESCHHHHHHHHHHHHHHHSSCEEEEECCTTCHHHHHHHHHHHHH-H
T ss_pred             CCCEEEEeCCCCHHHHHHHHHHH-HcCC-EEEEEECCHHHHHHHHHHHHHhcCCceEEEEecccChHHHHHHhhhhhh-h
Confidence            6789999987 999999999555 6699 6788888876643     233344432 333333222 22223333322 3


Q ss_pred             CCCceEEEeCCC
Q 017868          253 GTGIDVSFDCAG  264 (365)
Q Consensus       253 ~~~~d~vid~~g  264 (365)
                      .+++|+++.+.|
T Consensus       101 ~g~iDilvnnAg  112 (294)
T d1w6ua_         101 AGHPNIVINNAA  112 (294)
T ss_dssp             TCSCSEEEECCC
T ss_pred             ccccchhhhhhh
Confidence            578999999887

>d1hdca_ c.2.1.2 (A:) 3-alpha,20-beta-hydroxysteroid dehydrogenase {Streptomyces hydrogenans [TaxId: 1905]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Tyrosine-dependent oxidoreductases
domain: 3-alpha,20-beta-hydroxysteroid dehydrogenase
species: Streptomyces hydrogenans [TaxId: 1905]

Probab=96.73  E-value=0.0052  Score=50.53  Aligned_cols=81  Identities=27%  Similarity=0.323  Sum_probs=54.5

Q ss_pred             CCCEEEEEcC-CHHHHHHHHHHHHHCCCCeEEEEeCChhHHH-HHHHcCCCE-EEeCC-CCcccHHHHHHHHHHHhCCCc
Q 017868          181 PETNVLIMGA-GPIGLVTMLGAPRAFGAPRIVIVDVDDYRLS-VAKEIGADN-IVKVS-TNLQDIAEEVEKIQKAMGTGI  256 (365)
Q Consensus       181 ~g~~vlI~G~-g~~G~~ai~~l~~~~g~~~vi~v~~~~~~~~-~~~~~g~~~-~~~~~-~~~~~~~~~i~~~~~~~~~~~  256 (365)
                      +|+++||+|+ +++|.++++.++ ..|+ +|+.+++++++.+ .+++++... .+..+ .+.++..+.+++..+.. +++
T Consensus         4 ~gK~alVTGas~GIG~aia~~la-~~Ga-~V~~~~r~~~~~~~~~~~~~~~~~~~~~Dv~~~~~v~~~~~~~~~~~-g~i   80 (254)
T d1hdca_           4 SGKTVIITGGARGLGAEAARQAV-AAGA-RVVLADVLDEEGAATARELGDAARYQHLDVTIEEDWQRVVAYAREEF-GSV   80 (254)
T ss_dssp             CCSEEEEETTTSHHHHHHHHHHH-HTTC-EEEEEESCHHHHHHHHHTTGGGEEEEECCTTCHHHHHHHHHHHHHHH-SCC
T ss_pred             CCCEEEEeCcCCHHHHHHHHHHH-HCCC-EEEEEECCHHHHHHHHHHhCCceEEEEcccCCHHHHHHHHHHHHHHc-CCc
Confidence            5889999987 899999999555 5599 5788888887765 456676432 22222 22344444444444433 589


Q ss_pred             eEEEeCCC
Q 017868          257 DVSFDCAG  264 (365)
Q Consensus       257 d~vid~~g  264 (365)
                      |+++.++|
T Consensus        81 DilVnnAg   88 (254)
T d1hdca_          81 DGLVNNAG   88 (254)
T ss_dssp             CEEEECCC
T ss_pred             cEEEecCc
Confidence            99999887

>d1hxha_ c.2.1.2 (A:) 3beta/17beta hydroxysteroid dehydrogenase {Comamonas testosteroni [TaxId: 285]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Tyrosine-dependent oxidoreductases
domain: 3beta/17beta hydroxysteroid dehydrogenase
species: Comamonas testosteroni [TaxId: 285]

Probab=96.73  E-value=0.0047  Score=50.74  Aligned_cols=81  Identities=19%  Similarity=0.256  Sum_probs=54.9

Q ss_pred             CCCEEEEEcC-CHHHHHHHHHHHHHCCCCeEEEEeCChhHHH-HHHHcCCCEEEe-CCC-CcccHHHHHHHHHHHhCCCc
Q 017868          181 PETNVLIMGA-GPIGLVTMLGAPRAFGAPRIVIVDVDDYRLS-VAKEIGADNIVK-VST-NLQDIAEEVEKIQKAMGTGI  256 (365)
Q Consensus       181 ~g~~vlI~G~-g~~G~~ai~~l~~~~g~~~vi~v~~~~~~~~-~~~~~g~~~~~~-~~~-~~~~~~~~i~~~~~~~~~~~  256 (365)
                      +|+++||+|+ +++|.++++.++ ..|+ +|+.+++++++.+ ..++++...... .+- +..+..+.++...+. -+++
T Consensus         5 ~gK~alITGas~GIG~aia~~la-~~Ga-~V~~~~~~~~~~~~~~~~~~~~~~~~~~Dv~~~~~~~~~~~~~~~~-~g~i   81 (253)
T d1hxha_           5 QGKVALVTGGASGVGLEVVKLLL-GEGA-KVAFSDINEAAGQQLAAELGERSMFVRHDVSSEADWTLVMAAVQRR-LGTL   81 (253)
T ss_dssp             TTCEEEETTTTSHHHHHHHHHHH-HTTC-EEEEECSCHHHHHHHHHHHCTTEEEECCCTTCHHHHHHHHHHHHHH-HCSC
T ss_pred             CCCEEEEeCCCCHHHHHHHHHHH-HCCC-EEEEEECCHHHHHHHHHHhCCCeEEEEeecCCHHHHHHHHHHHHHH-hCCC
Confidence            5788999987 999999999454 6699 5888888887765 456777544322 222 223444444444333 3689


Q ss_pred             eEEEeCCC
Q 017868          257 DVSFDCAG  264 (365)
Q Consensus       257 d~vid~~g  264 (365)
                      |+++.++|
T Consensus        82 DilVnnAG   89 (253)
T d1hxha_          82 NVLVNNAG   89 (253)
T ss_dssp             CEEEECCC
T ss_pred             CeEEeccc
Confidence            99999988

>d1k2wa_ c.2.1.2 (A:) Sorbitol dehydrogenase {Rhodobacter sphaeroides [TaxId: 1063]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Tyrosine-dependent oxidoreductases
domain: Sorbitol dehydrogenase
species: Rhodobacter sphaeroides [TaxId: 1063]

Probab=96.72  E-value=0.0047  Score=50.89  Aligned_cols=81  Identities=25%  Similarity=0.291  Sum_probs=55.3

Q ss_pred             CCCEEEEEcC-CHHHHHHHHHHHHHCCCCeEEEEeCChhHHH-HHHHcCCCEE-EeCC-CCcccHHHHHHHHHHHhCCCc
Q 017868          181 PETNVLIMGA-GPIGLVTMLGAPRAFGAPRIVIVDVDDYRLS-VAKEIGADNI-VKVS-TNLQDIAEEVEKIQKAMGTGI  256 (365)
Q Consensus       181 ~g~~vlI~G~-g~~G~~ai~~l~~~~g~~~vi~v~~~~~~~~-~~~~~g~~~~-~~~~-~~~~~~~~~i~~~~~~~~~~~  256 (365)
                      +|+++||+|+ +++|.++++.++ ..|+ +|+.+++++++.+ .+++++.... +..+ .+.++..+.+++..+.. +++
T Consensus         4 ~gK~alVTGas~GIG~aia~~la-~~Ga-~V~~~~r~~~~l~~~~~~~~~~~~~~~~Dvt~~~~v~~~~~~~~~~~-g~i   80 (256)
T d1k2wa_           4 DGKTALITGSARGIGRAFAEAYV-REGA-RVAIADINLEAARATAAEIGPAACAIALDVTDQASIDRCVAELLDRW-GSI   80 (256)
T ss_dssp             TTEEEEEETCSSHHHHHHHHHHH-HTTE-EEEEEESCHHHHHHHHHHHCTTEEEEECCTTCHHHHHHHHHHHHHHH-SCC
T ss_pred             CCCEEEEeCCCCHHHHHHHHHHH-HCCC-EEEEEECCHHHHHHHHHHhCCceEEEEeeCCCHHHHHHHHHHHHHHh-CCc
Confidence            5788999987 999999999454 5699 6788888887765 5577875432 2222 23344444444444433 589


Q ss_pred             eEEEeCCC
Q 017868          257 DVSFDCAG  264 (365)
Q Consensus       257 d~vid~~g  264 (365)
                      |+++.++|
T Consensus        81 DilVnnAg   88 (256)
T d1k2wa_          81 DILVNNAA   88 (256)
T ss_dssp             CEEEECCC
T ss_pred             cEEEeecc
Confidence            99999888

>d1yb1a_ c.2.1.2 (A:) 17-beta-hydroxysteroid dehydrogenase type XI {Human (Homo sapiens) [TaxId: 9606]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Tyrosine-dependent oxidoreductases
domain: 17-beta-hydroxysteroid dehydrogenase type XI
species: Human (Homo sapiens) [TaxId: 9606]

Probab=96.69  E-value=0.0092  Score=48.61  Aligned_cols=82  Identities=24%  Similarity=0.351  Sum_probs=54.0

Q ss_pred             CCCEEEEEcC-CHHHHHHHHHHHHHCCCCeEEEEeCChhHHHH----HHHcCCC-EEEeCCCCc-ccHHHHHHHHHHHhC
Q 017868          181 PETNVLIMGA-GPIGLVTMLGAPRAFGAPRIVIVDVDDYRLSV----AKEIGAD-NIVKVSTNL-QDIAEEVEKIQKAMG  253 (365)
Q Consensus       181 ~g~~vlI~G~-g~~G~~ai~~l~~~~g~~~vi~v~~~~~~~~~----~~~~g~~-~~~~~~~~~-~~~~~~i~~~~~~~~  253 (365)
                      .|+++||+|+ +++|..++..++ ..|+ +|+.+++++++.+.    ++..|.. ..+..+-.+ ++....++++.+. -
T Consensus         6 ~Gkv~lITGas~GIG~~ia~~la-~~G~-~V~l~~r~~~~l~~~~~~~~~~~~~~~~~~~Dvs~~~~v~~~~~~i~~~-~   82 (244)
T d1yb1a_           6 TGEIVLITGAGHGIGRLTAYEFA-KLKS-KLVLWDINKHGLEETAAKCKGLGAKVHTFVVDCSNREDIYSSAKKVKAE-I   82 (244)
T ss_dssp             TTCEEEEETTTSHHHHHHHHHHH-HTTC-EEEEEESCHHHHHHHHHHHHHTTCCEEEEECCTTCHHHHHHHHHHHHHH-T
T ss_pred             CCCEEEEeCCCcHHHHHHHHHHH-HCCC-EEEEEECCHHHHHHHHHHHHhcCCcEEEEEeeCCCHHHHHHHHHHHHHH-c
Confidence            6899999987 999999998555 5599 67888888887653    3344543 223333222 3334444444433 4


Q ss_pred             CCceEEEeCCCC
Q 017868          254 TGIDVSFDCAGL  265 (365)
Q Consensus       254 ~~~d~vid~~g~  265 (365)
                      +.+|+++.++|.
T Consensus        83 g~idilinnag~   94 (244)
T d1yb1a_          83 GDVSILVNNAGV   94 (244)
T ss_dssp             CCCSEEEECCCC
T ss_pred             CCCceeEeeccc
Confidence            579999999883

>d2fk8a1 c.66.1.18 (A:22-301) Methoxy mycolic acid synthase 4, Mma4 {Mycobacterium tuberculosis [TaxId: 1773]}

class: Alpha and beta proteins (a/b)
fold: S-adenosyl-L-methionine-dependent methyltransferases
superfamily: S-adenosyl-L-methionine-dependent methyltransferases
family: Mycolic acid cyclopropane synthase
domain: Methoxy mycolic acid synthase 4, Mma4
species: Mycobacterium tuberculosis [TaxId: 1773]

Probab=96.66  E-value=0.007  Score=50.47  Aligned_cols=100  Identities=14%  Similarity=0.217  Sum_probs=66.1

Q ss_pred             HHhcCCCCCCEEEEEcCCHHHHHHHHHHHHHCCCCeEEEEeCChhHHHHHHH----cCCCEEEeCCCCcccHHHHHHHHH
Q 017868          174 CRRANIGPETNVLIMGAGPIGLVTMLGAPRAFGAPRIVIVDVDDYRLSVAKE----IGADNIVKVSTNLQDIAEEVEKIQ  249 (365)
Q Consensus       174 ~~~~~~~~g~~vlI~G~g~~G~~ai~~l~~~~g~~~vi~v~~~~~~~~~~~~----~g~~~~~~~~~~~~~~~~~i~~~~  249 (365)
                      ++..++++|++||=+|+|. |..+.. +++..|+ .|++++.+++..+.+++    .|....+....  .++.    +  
T Consensus        45 ~~~l~l~~g~~VLDiGCG~-G~~a~~-~a~~~g~-~v~gi~ls~~q~~~a~~~~~~~~l~~~~~~~~--~d~~----~--  113 (280)
T d2fk8a1          45 LDKLDLKPGMTLLDIGCGW-GTTMRR-AVERFDV-NVIGLTLSKNQHARCEQVLASIDTNRSRQVLL--QGWE----D--  113 (280)
T ss_dssp             HTTSCCCTTCEEEEESCTT-SHHHHH-HHHHHCC-EEEEEESCHHHHHHHHHHHHTSCCSSCEEEEE--SCGG----G--
T ss_pred             HHHcCCCCCCEEEEecCCc-hHHHHH-HHHhCce-eEEEecchHHHHHHHHHHHHhhccccchhhhh--hhhh----h--
Confidence            3667899999999999854 445556 6677798 79999999988776544    34322111101  1211    1  


Q ss_pred             HHhCCCceEEEe-----CCCCH---HHHHHHHHhcccCCEEEEEc
Q 017868          250 KAMGTGIDVSFD-----CAGLN---KTMSTALGATCAGGKVCLVG  286 (365)
Q Consensus       250 ~~~~~~~d~vid-----~~g~~---~~~~~~~~~l~~~G~~~~~g  286 (365)
                        ....+|.|+.     .++..   ..+..+.++|+|+|++++..
T Consensus       114 --~~~~fD~i~si~~~eh~~~~~~~~~f~~i~~~LkpgG~~~i~~  156 (280)
T d2fk8a1         114 --FAEPVDRIVSIEAFEHFGHENYDDFFKRCFNIMPADGRMTVQS  156 (280)
T ss_dssp             --CCCCCSEEEEESCGGGTCGGGHHHHHHHHHHHSCTTCEEEEEE
T ss_pred             --hccchhhhhHhhHHHHhhhhhHHHHHHHHHhccCCCceEEEEE
Confidence              1467888864     44432   45677889999999998753

>d1r18a_ c.66.1.7 (A:) Protein-L-isoaspartyl O-methyltransferase {Fruit fly (Drosophila melanogaster) [TaxId: 7227]}

class: Alpha and beta proteins (a/b)
fold: S-adenosyl-L-methionine-dependent methyltransferases
superfamily: S-adenosyl-L-methionine-dependent methyltransferases
family: Protein-L-isoaspartyl O-methyltransferase
domain: Protein-L-isoaspartyl O-methyltransferase
species: Fruit fly (Drosophila melanogaster) [TaxId: 7227]

Probab=96.65  E-value=0.00066  Score=54.87  Aligned_cols=104  Identities=15%  Similarity=0.194  Sum_probs=62.6

Q ss_pred             HHHHhc--CCCCCCEEEEEcCC--HHHHHHHHHHHHHCCC---CeEEEEeCChhHHHHHHH---------cCCCEEEeCC
Q 017868          172 HACRRA--NIGPETNVLIMGAG--PIGLVTMLGAPRAFGA---PRIVIVDVDDYRLSVAKE---------IGADNIVKVS  235 (365)
Q Consensus       172 ~~~~~~--~~~~g~~vlI~G~g--~~G~~ai~~l~~~~g~---~~vi~v~~~~~~~~~~~~---------~g~~~~~~~~  235 (365)
                      ..++..  .+++|++||..|+|  -....+.+ ++...|.   .+|++++..++-.+.+++         ++...+....
T Consensus        69 ~~l~~L~~~l~~g~~VLeIGtGsGY~ta~la~-l~g~~g~~~~~~V~~iE~~~~l~~~a~~~l~~~~~~~~~~~nv~~~~  147 (223)
T d1r18a_          69 FALEYLRDHLKPGARILDVGSGSGYLTACFYR-YIKAKGVDADTRIVGIEHQAELVRRSKANLNTDDRSMLDSGQLLIVE  147 (223)
T ss_dssp             HHHHHTTTTCCTTCEEEEESCTTSHHHHHHHH-HHHHSCCCTTCEEEEEESCHHHHHHHHHHHHHHHHHHHHHTSEEEEE
T ss_pred             HHHHHHhhccCCCCeEEEecCCCCHHHHHHHH-HhhhccCCcccEEEEEecCHHHHHHHHHhhhhcchhhcCccEEEEEe
Confidence            345543  78999999999873  33333444 5555453   269999988876555432         1222222111


Q ss_pred             CC-cccHHHHHHHHHHHhCCCceEEEeCCCCHHHHHHHHHhcccCCEEEEE
Q 017868          236 TN-LQDIAEEVEKIQKAMGTGIDVSFDCAGLNKTMSTALGATCAGGKVCLV  285 (365)
Q Consensus       236 ~~-~~~~~~~i~~~~~~~~~~~d~vid~~g~~~~~~~~~~~l~~~G~~~~~  285 (365)
                      .+ ...+.         ...+||.|+-..+........++.|+++|+++..
T Consensus       148 ~d~~~~~~---------~~~~fD~Iiv~~a~~~~p~~l~~~Lk~gG~lV~p  189 (223)
T d1r18a_         148 GDGRKGYP---------PNAPYNAIHVGAAAPDTPTELINQLASGGRLIVP  189 (223)
T ss_dssp             SCGGGCCG---------GGCSEEEEEECSCBSSCCHHHHHTEEEEEEEEEE
T ss_pred             cccccccc---------cccceeeEEEEeechhchHHHHHhcCCCcEEEEE
Confidence            11 11110         1468999988766554556778899999999873

>d2b25a1 c.66.1.13 (A:6-329) Hypothetical protein FLJ20628 {Human (Homo sapiens) [TaxId: 9606]}

class: Alpha and beta proteins (a/b)
fold: S-adenosyl-L-methionine-dependent methyltransferases
superfamily: S-adenosyl-L-methionine-dependent methyltransferases
family: tRNA(1-methyladenosine) methyltransferase-like
domain: Hypothetical protein FLJ20628
species: Human (Homo sapiens) [TaxId: 9606]

Probab=96.65  E-value=0.0028  Score=54.07  Aligned_cols=107  Identities=20%  Similarity=0.295  Sum_probs=65.7

Q ss_pred             HHHHhcCCCCCCEEEEEcCCHHHHHHHHHHHHHCCCC-eEEEEeCChhHHHHHHH----cC-----------CCEEEeCC
Q 017868          172 HACRRANIGPETNVLIMGAGPIGLVTMLGAPRAFGAP-RIVIVDVDDYRLSVAKE----IG-----------ADNIVKVS  235 (365)
Q Consensus       172 ~~~~~~~~~~g~~vlI~G~g~~G~~ai~~l~~~~g~~-~vi~v~~~~~~~~~~~~----~g-----------~~~~~~~~  235 (365)
                      +.+...+++||++||=.|+|. |.+++. +|+..|.+ +|++++.+++..+.+++    ++           .+.+....
T Consensus        89 ~Il~~l~i~pG~rVLE~GtGs-G~lt~~-LAr~vg~~G~V~t~E~~~~~~~~A~~n~~~~~~~~~~~~~~~~~~nv~~~~  166 (324)
T d2b25a1          89 MILSMMDINPGDTVLEAGSGS-GGMSLF-LSKAVGSQGRVISFEVRKDHHDLAKKNYKHWRDSWKLSHVEEWPDNVDFIH  166 (324)
T ss_dssp             HHHHHHTCCTTCEEEEECCTT-SHHHHH-HHHHHCTTCEEEEEESSHHHHHHHHHHHHHHHHHHTTTCSSCCCCCEEEEE
T ss_pred             HHHHHhCCCCCCEEEEecccc-cHHHHH-HHHHhCCCcEEEEecCCHHHHHHHHHHHHHhhhhhhhhhhhccccceeEEe
Confidence            345678999999999998865 777777 77776643 79999999988776543    11           11111111


Q ss_pred             CCcccHHHHHHHHHHHhCCCceEEE-eCCCCHHHHHHHHHhcccCCEEEEEc
Q 017868          236 TNLQDIAEEVEKIQKAMGTGIDVSF-DCAGLNKTMSTALGATCAGGKVCLVG  286 (365)
Q Consensus       236 ~~~~~~~~~i~~~~~~~~~~~d~vi-d~~g~~~~~~~~~~~l~~~G~~~~~g  286 (365)
                      .+-.++...+      ....+|.|| |-......+.++.++|+++|+++.+.
T Consensus       167 ~di~~~~~~~------~~~~fD~V~LD~p~P~~~l~~~~~~LKpGG~lv~~~  212 (324)
T d2b25a1         167 KDISGATEDI------KSLTFDAVALDMLNPHVTLPVFYPHLKHGGVCAVYV  212 (324)
T ss_dssp             SCTTCCC-------------EEEEEECSSSTTTTHHHHGGGEEEEEEEEEEE
T ss_pred             cchhhccccc------CCCCcceEeecCcCHHHHHHHHHHhccCCCEEEEEe
Confidence            1111111111      134688765 43332347788999999999999874

>d1zk4a1 c.2.1.2 (A:1-251) R-specific alcohol dehydrogenase {Lactobacillus brevis [TaxId: 1580]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Tyrosine-dependent oxidoreductases
domain: R-specific alcohol dehydrogenase
species: Lactobacillus brevis [TaxId: 1580]

Probab=96.65  E-value=0.0059  Score=50.08  Aligned_cols=82  Identities=18%  Similarity=0.206  Sum_probs=53.6

Q ss_pred             CCCEEEEEcC-CHHHHHHHHHHHHHCCCCeEEEEeCChhHHHHH-HHcCC---CEEEeCCC-CcccHHHHHHHHHHHhCC
Q 017868          181 PETNVLIMGA-GPIGLVTMLGAPRAFGAPRIVIVDVDDYRLSVA-KEIGA---DNIVKVST-NLQDIAEEVEKIQKAMGT  254 (365)
Q Consensus       181 ~g~~vlI~G~-g~~G~~ai~~l~~~~g~~~vi~v~~~~~~~~~~-~~~g~---~~~~~~~~-~~~~~~~~i~~~~~~~~~  254 (365)
                      +|+++||+|+ +++|.++++.+ ...|+ +|+.+++++++.+.+ ++++.   ...+..+- +.++..+.+++..+.. +
T Consensus         5 ~gK~alVTGas~GIG~aia~~l-a~~Ga-~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~Dv~~~~~v~~~~~~~~~~~-G   81 (251)
T d1zk4a1           5 DGKVAIITGGTLGIGLAIATKF-VEEGA-KVMITGRHSDVGEKAAKSVGTPDQIQFFQHDSSDEDGWTKLFDATEKAF-G   81 (251)
T ss_dssp             TTCEEEETTTTSHHHHHHHHHH-HHTTC-EEEEEESCHHHHHHHHHHHCCTTTEEEEECCTTCHHHHHHHHHHHHHHH-S
T ss_pred             CCCEEEEeCCCCHHHHHHHHHH-HHCCC-EEEEEECCHHHHHHHHHHhCCCCcEEEEEccCCCHHHHHHHHHHHHHHh-C
Confidence            5789999987 99999999945 45699 578888888776644 44542   12222222 2233444444444433 5


Q ss_pred             CceEEEeCCCC
Q 017868          255 GIDVSFDCAGL  265 (365)
Q Consensus       255 ~~d~vid~~g~  265 (365)
                      ++|++++++|.
T Consensus        82 ~iDiLVnnAg~   92 (251)
T d1zk4a1          82 PVSTLVNNAGI   92 (251)
T ss_dssp             SCCEEEECCCC
T ss_pred             CceEEEecccc
Confidence            89999998873

>d2bgka1 c.2.1.2 (A:11-278) Rhizome secoisolariciresinol dehydrogenase {Mayapple (Podophyllum peltatum) [TaxId: 35933]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Tyrosine-dependent oxidoreductases
domain: Rhizome secoisolariciresinol dehydrogenase
species: Mayapple (Podophyllum peltatum) [TaxId: 35933]

Probab=96.63  E-value=0.0084  Score=49.64  Aligned_cols=81  Identities=26%  Similarity=0.380  Sum_probs=54.1

Q ss_pred             CCCEEEEEcC-CHHHHHHHHHHHHHCCCCeEEEEeCChhHHHH-HHHcCC---CEEEeCC-CCcccHHHHHHHHHHHhCC
Q 017868          181 PETNVLIMGA-GPIGLVTMLGAPRAFGAPRIVIVDVDDYRLSV-AKEIGA---DNIVKVS-TNLQDIAEEVEKIQKAMGT  254 (365)
Q Consensus       181 ~g~~vlI~G~-g~~G~~ai~~l~~~~g~~~vi~v~~~~~~~~~-~~~~g~---~~~~~~~-~~~~~~~~~i~~~~~~~~~  254 (365)
                      +|+++||+|+ +++|.++++.++ ..|+ +|+.+++++++.+. +++++.   ...+..+ .+.++....+++..+.. +
T Consensus         5 ~gKvalITGas~GIG~aia~~la-~~Ga-~V~i~~r~~~~~~~~~~~l~~~~~~~~~~~Dv~~~~~v~~~~~~~~~~~-g   81 (268)
T d2bgka1           5 QDKVAIITGGAGGIGETTAKLFV-RYGA-KVVIADIADDHGQKVCNNIGSPDVISFVHCDVTKDEDVRNLVDTTIAKH-G   81 (268)
T ss_dssp             TTCEEEEESTTSHHHHHHHHHHH-HTTC-EEEEEESCHHHHHHHHHHHCCTTTEEEEECCTTCHHHHHHHHHHHHHHH-S
T ss_pred             CCCEEEEeCCCcHHHHHHHHHHH-HCCC-EEEEEECCHHHHHHHHHHhcCCCceEEEEccCCCHHHHHHHHHHHHHHc-C
Confidence            6789999987 999999999454 5699 57888888887654 455542   2222222 23344544555554433 5


Q ss_pred             CceEEEeCCC
Q 017868          255 GIDVSFDCAG  264 (365)
Q Consensus       255 ~~d~vid~~g  264 (365)
                      .+|+++.++|
T Consensus        82 ~iD~lVnnAG   91 (268)
T d2bgka1          82 KLDIMFGNVG   91 (268)
T ss_dssp             CCCEEEECCC
T ss_pred             Ccceeccccc
Confidence            8999999887

>d1sbya1 c.2.1.2 (A:1-254) Drosophila alcohol dehydrogenase {Fly (Drosophila lebanonensis) [TaxId: 7225]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Tyrosine-dependent oxidoreductases
domain: Drosophila alcohol dehydrogenase
species: Fly (Drosophila lebanonensis) [TaxId: 7225]

Probab=96.59  E-value=0.003  Score=52.05  Aligned_cols=83  Identities=22%  Similarity=0.246  Sum_probs=49.6

Q ss_pred             CCCEEEEEcC-CHHHHHHHHHHHHHCCCCeEEEEeCChhHHHH---HHHcCCCEE--EeCCC--CcccHHHHHHHHHHHh
Q 017868          181 PETNVLIMGA-GPIGLVTMLGAPRAFGAPRIVIVDVDDYRLSV---AKEIGADNI--VKVST--NLQDIAEEVEKIQKAM  252 (365)
Q Consensus       181 ~g~~vlI~G~-g~~G~~ai~~l~~~~g~~~vi~v~~~~~~~~~---~~~~g~~~~--~~~~~--~~~~~~~~i~~~~~~~  252 (365)
                      +|++|||+|+ +++|.+++..++ ..|+++++..++.++....   ....+-..+  +..+.  +..++.+.+.++.+..
T Consensus         4 ~gK~vlITGgs~GIG~~~A~~la-~~G~~vii~~r~~~~~~~~~~~~~~~~~~~~~~~~~d~~~~~~~~~~~~~~~~~~~   82 (254)
T d1sbya1           4 TNKNVIFVAALGGIGLDTSRELV-KRNLKNFVILDRVENPTALAELKAINPKVNITFHTYDVTVPVAESKKLLKKIFDQL   82 (254)
T ss_dssp             TTCEEEEETTTSHHHHHHHHHHH-HTCCSEEEEEESSCCHHHHHHHHHHCTTSEEEEEECCTTSCHHHHHHHHHHHHHHH
T ss_pred             CCCEEEEecCCCHHHHHHHHHHH-HCCCEEEEEECCcccHHHHHHHHhhCCCCCEEEEEeecCCCHHHHHHHHHHHHHHc
Confidence            5889999987 899999999565 5599765655544432222   122332222  22222  2223444455554443


Q ss_pred             CCCceEEEeCCCC
Q 017868          253 GTGIDVSFDCAGL  265 (365)
Q Consensus       253 ~~~~d~vid~~g~  265 (365)
                       +++|+++.++|.
T Consensus        83 -g~iDilvnnAG~   94 (254)
T d1sbya1          83 -KTVDILINGAGI   94 (254)
T ss_dssp             -SCCCEEEECCCC
T ss_pred             -CCCCEEEeCCCC
Confidence             589999999984

>d1xg5a_ c.2.1.2 (A:) Putative dehydrogenase ARPG836 (MGC4172) {Human (Homo sapiens) [TaxId: 9606]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Tyrosine-dependent oxidoreductases
domain: Putative dehydrogenase ARPG836 (MGC4172)
species: Human (Homo sapiens) [TaxId: 9606]

Probab=96.59  E-value=0.0071  Score=49.75  Aligned_cols=82  Identities=23%  Similarity=0.330  Sum_probs=53.7

Q ss_pred             CCCEEEEEcC-CHHHHHHHHHHHHHCCCCeEEEEeCChhHHHHH----HHcCCC-EE--EeCC-CCcccHHHHHHHHHHH
Q 017868          181 PETNVLIMGA-GPIGLVTMLGAPRAFGAPRIVIVDVDDYRLSVA----KEIGAD-NI--VKVS-TNLQDIAEEVEKIQKA  251 (365)
Q Consensus       181 ~g~~vlI~G~-g~~G~~ai~~l~~~~g~~~vi~v~~~~~~~~~~----~~~g~~-~~--~~~~-~~~~~~~~~i~~~~~~  251 (365)
                      +|+++||+|+ +++|.++++.++ ..|+ +|+.+++++++.+.+    ++.+.. .+  +..+ .+.++..+.+..+.+.
T Consensus         9 k~Kv~lITGas~GIG~aiA~~la-~~G~-~Vv~~~r~~~~l~~~~~~l~~~~~~~~~~~~~~Dls~~~~v~~~v~~~~~~   86 (257)
T d1xg5a_           9 RDRLALVTGASGGIGAAVARALV-QQGL-KVVGCARTVGNIEELAAECKSAGYPGTLIPYRCDLSNEEDILSMFSAIRSQ   86 (257)
T ss_dssp             TTCEEEEESTTSHHHHHHHHHHH-HTTC-EEEEEESCHHHHHHHHHHHHHTTCSSEEEEEECCTTCHHHHHHHHHHHHHH
T ss_pred             CCCEEEEeCCCCHHHHHHHHHHH-HCCC-EEEEEECCHHHHHHHHHHHHhcCCCceEEEEEccCCCHHHHHHHHHHHHHh
Confidence            5788999987 999999999555 5699 677888888776542    333321 22  2222 2334555555555543


Q ss_pred             hCCCceEEEeCCCC
Q 017868          252 MGTGIDVSFDCAGL  265 (365)
Q Consensus       252 ~~~~~d~vid~~g~  265 (365)
                      . +++|++|.++|.
T Consensus        87 ~-g~iD~lVnnAg~   99 (257)
T d1xg5a_          87 H-SGVDICINNAGL   99 (257)
T ss_dssp             H-CCCSEEEECCCC
T ss_pred             c-CCCCEEEecccc
Confidence            3 579999998873

>d1vl8a_ c.2.1.2 (A:) Gluconate 5-dehydrogenase {Thermotoga maritima [TaxId: 2336]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Tyrosine-dependent oxidoreductases
domain: Gluconate 5-dehydrogenase
species: Thermotoga maritima [TaxId: 2336]

Probab=96.59  E-value=0.0099  Score=48.67  Aligned_cols=82  Identities=16%  Similarity=0.354  Sum_probs=53.3

Q ss_pred             CCCEEEEEcC-CHHHHHHHHHHHHHCCCCeEEEEeCChhHHH-----HHHHcCCCEE-EeCCC-CcccHHHHHHHHHHHh
Q 017868          181 PETNVLIMGA-GPIGLVTMLGAPRAFGAPRIVIVDVDDYRLS-----VAKEIGADNI-VKVST-NLQDIAEEVEKIQKAM  252 (365)
Q Consensus       181 ~g~~vlI~G~-g~~G~~ai~~l~~~~g~~~vi~v~~~~~~~~-----~~~~~g~~~~-~~~~~-~~~~~~~~i~~~~~~~  252 (365)
                      +|+++||+|+ +++|.++++.+ ...|+ +|+.+++++++.+     +.++.|.... +..+- +.++..+.+++..+..
T Consensus         4 ~gK~~lITGas~GIG~aia~~l-a~~Ga-~V~i~~r~~~~~~~~~~~l~~~~g~~~~~~~~Dv~~~~~v~~~~~~~~~~~   81 (251)
T d1vl8a_           4 RGRVALVTGGSRGLGFGIAQGL-AEAGC-SVVVASRNLEEASEAAQKLTEKYGVETMAFRCDVSNYEEVKKLLEAVKEKF   81 (251)
T ss_dssp             TTCEEEEETTTSHHHHHHHHHH-HHTTC-EEEEEESCHHHHHHHHHHHHHHHCCCEEEEECCTTCHHHHHHHHHHHHHHH
T ss_pred             CCCEEEEeCCCCHHHHHHHHHH-HHCCC-EEEEEECCHHHHHHHHHHHHHHhCCcEEEEEccCCCHHHHHHHHHHHHHHc
Confidence            5789999987 99999999945 45699 6788888876643     3344565432 22222 2344444445444433


Q ss_pred             CCCceEEEeCCCC
Q 017868          253 GTGIDVSFDCAGL  265 (365)
Q Consensus       253 ~~~~d~vid~~g~  265 (365)
                       +++|++|.++|.
T Consensus        82 -g~iDiLVnnAG~   93 (251)
T d1vl8a_          82 -GKLDTVVNAAGI   93 (251)
T ss_dssp             -SCCCEEEECCCC
T ss_pred             -CCCCEEEECCCC
Confidence             589999999873

>d1xu9a_ c.2.1.2 (A:) 11-beta-hydroxysteroid dehydrogenase 1 {Human (Homo sapiens) [TaxId: 9606]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Tyrosine-dependent oxidoreductases
domain: 11-beta-hydroxysteroid dehydrogenase 1
species: Human (Homo sapiens) [TaxId: 9606]

Probab=96.58  E-value=0.0052  Score=50.96  Aligned_cols=83  Identities=17%  Similarity=0.108  Sum_probs=50.5

Q ss_pred             CCCCEEEEEcC-CHHHHHHHHHHHHHCCCCeEEEEeCChhHHHHHH-----HcCCCE-EEeCCCCcccHHHHHHHHHHHh
Q 017868          180 GPETNVLIMGA-GPIGLVTMLGAPRAFGAPRIVIVDVDDYRLSVAK-----EIGADN-IVKVSTNLQDIAEEVEKIQKAM  252 (365)
Q Consensus       180 ~~g~~vlI~G~-g~~G~~ai~~l~~~~g~~~vi~v~~~~~~~~~~~-----~~g~~~-~~~~~~~~~~~~~~i~~~~~~~  252 (365)
                      -+|+++||+|+ +++|.+++..++ ..|+ +|+.+++++++.+.+.     ..+... .+..+....+....+.+.....
T Consensus        12 L~GK~alITGassGIG~aiA~~la-~~G~-~Vil~~r~~~~l~~~~~~~~~~~~~~~~~~~~d~~~~~~~~~~~~~~~~~   89 (269)
T d1xu9a_          12 LQGKKVIVTGASKGIGREMAYHLA-KMGA-HVVVTARSKETLQKVVSHCLELGAASAHYIAGTMEDMTFAEQFVAQAGKL   89 (269)
T ss_dssp             GTTCEEEESSCSSHHHHHHHHHHH-HTTC-EEEEEESCHHHHHHHHHHHHHHTCSEEEEEECCTTCHHHHHHHHHHHHHH
T ss_pred             cCCCEEEEeCCCcHHHHHHHHHHH-HCCC-EEEEEECCHHHHHHHHHHHhhhhcccchhhhhhhhhHHHHHHHHHHHHHH
Confidence            36899999987 999999999565 5599 6888889888765432     223322 2222222222222222222222


Q ss_pred             CCCceEEEeCCC
Q 017868          253 GTGIDVSFDCAG  264 (365)
Q Consensus       253 ~~~~d~vid~~g  264 (365)
                      .+..|+++.+.|
T Consensus        90 ~g~~~~li~nag  101 (269)
T d1xu9a_          90 MGGLDMLILNHI  101 (269)
T ss_dssp             HTSCSEEEECCC
T ss_pred             hCCccccccccc
Confidence            467888888766

>d1bdba_ c.2.1.2 (A:) Cis-biphenyl-2,3-dihydrodiol-2,3-dehydrogenase {Pseudomonas sp., lb400 [TaxId: 306]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Tyrosine-dependent oxidoreductases
domain: Cis-biphenyl-2,3-dihydrodiol-2,3-dehydrogenase
species: Pseudomonas sp., lb400 [TaxId: 306]

Probab=96.58  E-value=0.0067  Score=50.52  Aligned_cols=81  Identities=22%  Similarity=0.284  Sum_probs=54.2

Q ss_pred             CCCEEEEEcC-CHHHHHHHHHHHHHCCCCeEEEEeCChhHHH-HHHHcCCCEE-EeCC-CCcccHHHHHHHHHHHhCCCc
Q 017868          181 PETNVLIMGA-GPIGLVTMLGAPRAFGAPRIVIVDVDDYRLS-VAKEIGADNI-VKVS-TNLQDIAEEVEKIQKAMGTGI  256 (365)
Q Consensus       181 ~g~~vlI~G~-g~~G~~ai~~l~~~~g~~~vi~v~~~~~~~~-~~~~~g~~~~-~~~~-~~~~~~~~~i~~~~~~~~~~~  256 (365)
                      +|+++||+|+ +++|.++++.++ ..|+ +|+.+++++++.+ +.++++.... +..+ .+.++..+.+.+..+. -+++
T Consensus         4 ~gK~alITGas~GIG~aia~~la-~~Ga-~V~i~~r~~~~l~~~~~~~~~~~~~~~~Dv~~~~~~~~~~~~~~~~-~g~i   80 (276)
T d1bdba_           4 KGEAVLITGGASGLGRALVDRFV-AEGA-KVAVLDKSAERLAELETDHGDNVLGIVGDVRSLEDQKQAASRCVAR-FGKI   80 (276)
T ss_dssp             TTCEEEEETTTSHHHHHHHHHHH-HTTC-EEEEEESCHHHHHHHHHHHGGGEEEEECCTTCHHHHHHHHHHHHHH-HSCC
T ss_pred             CCCEEEEeCCCCHHHHHHHHHHH-HCCC-EEEEEECCHHHHHHHHHHcCCCeeEEecccccHHHHHHHHHHHHHH-hCCc
Confidence            5889999987 999999999555 5599 6788888888765 4466664332 2222 2233444444444433 3589


Q ss_pred             eEEEeCCC
Q 017868          257 DVSFDCAG  264 (365)
Q Consensus       257 d~vid~~g  264 (365)
                      |+++.++|
T Consensus        81 dilvnnAG   88 (276)
T d1bdba_          81 DTLIPNAG   88 (276)
T ss_dssp             CEEECCCC
T ss_pred             cccccccc
Confidence            99999887

>d1dhra_ c.2.1.2 (A:) Dihydropteridin reductase (pteridine reductase) {Rat (Rattus norvegicus) [TaxId: 10116]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Tyrosine-dependent oxidoreductases
domain: Dihydropteridin reductase (pteridine reductase)
species: Rat (Rattus norvegicus) [TaxId: 10116]

Probab=96.49  E-value=0.0098  Score=48.16  Aligned_cols=100  Identities=25%  Similarity=0.303  Sum_probs=58.0

Q ss_pred             CCCEEEEEcC-CHHHHHHHHHHHHHCCCCeEEEEeCChhHHHHHHHcCCCEEEeCCCCcccHHHHHH-HHHHH-hCCCce
Q 017868          181 PETNVLIMGA-GPIGLVTMLGAPRAFGAPRIVIVDVDDYRLSVAKEIGADNIVKVSTNLQDIAEEVE-KIQKA-MGTGID  257 (365)
Q Consensus       181 ~g~~vlI~G~-g~~G~~ai~~l~~~~g~~~vi~v~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~i~-~~~~~-~~~~~d  257 (365)
                      +|++|||+|+ +++|.+.++.+ ...|+ +|+.++..+.+..     .............+..+.+. ...+. ...++|
T Consensus         1 egK~vlITGas~GIG~a~a~~l-~~~G~-~V~~~~~~~~~~~-----~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~iD   73 (236)
T d1dhra_           1 EARRVLVYGGRGALGSRCVQAF-RARNW-WVASIDVVENEEA-----SASVIVKMTDSFTEQADQVTAEVGKLLGDQKVD   73 (236)
T ss_dssp             CCCEEEEETTTSHHHHHHHHHH-HTTTC-EEEEEESSCCTTS-----SEEEECCCCSCHHHHHHHHHHHHHHHHTTCCEE
T ss_pred             CCCEEEEECCCCHHHHHHHHHH-HHCCC-EEEEEeCCccccc-----cccceeecccCcHHHHHHHHHHHHHHhCCCCce
Confidence            4789999987 99999999944 56699 5777766544311     11111111111122222222 22222 245799


Q ss_pred             EEEeCCCCH-----------H---------------HHHHHHHhcccCCEEEEEcc
Q 017868          258 VSFDCAGLN-----------K---------------TMSTALGATCAGGKVCLVGM  287 (365)
Q Consensus       258 ~vid~~g~~-----------~---------------~~~~~~~~l~~~G~~~~~g~  287 (365)
                      ++|+++|..           +               ....++..++++|+++.++.
T Consensus        74 ~lInnAG~~~~~~~~~~~~~~~~~~~~~~n~~~~~~~~~~~~~~m~~~G~Iv~isS  129 (236)
T d1dhra_          74 AILCVAGGWAGGNAKSKSLFKNCDLMWKQSIWTSTISSHLATKHLKEGGLLTLAGA  129 (236)
T ss_dssp             EEEECCCCCCCBCTTCTTHHHHHHHHHHHHHHHHHHHHHHHHHHEEEEEEEEEECC
T ss_pred             EEEECCcccccccchhcCCHHHHHHHHHHcchHHHHHHHHHHHhcccccceeEEcc
Confidence            999988721           1               22235567788899998864

>d1fmca_ c.2.1.2 (A:) 7-alpha-hydroxysteroid dehydrogenase {Escherichia coli [TaxId: 562]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Tyrosine-dependent oxidoreductases
domain: 7-alpha-hydroxysteroid dehydrogenase
species: Escherichia coli [TaxId: 562]

Probab=96.48  E-value=0.0074  Score=49.59  Aligned_cols=82  Identities=17%  Similarity=0.266  Sum_probs=53.1

Q ss_pred             CCCEEEEEcC-CHHHHHHHHHHHHHCCCCeEEEEeCChhHHHH----HHHcCCCE-EEeCCC-CcccHHHHHHHHHHHhC
Q 017868          181 PETNVLIMGA-GPIGLVTMLGAPRAFGAPRIVIVDVDDYRLSV----AKEIGADN-IVKVST-NLQDIAEEVEKIQKAMG  253 (365)
Q Consensus       181 ~g~~vlI~G~-g~~G~~ai~~l~~~~g~~~vi~v~~~~~~~~~----~~~~g~~~-~~~~~~-~~~~~~~~i~~~~~~~~  253 (365)
                      +|+++||+|+ +++|.++++.+ ...|+ +|+.+++++++.+.    +++.|... .+..+- +.++..+.+.+..+.. 
T Consensus        10 ~gK~alITGas~GIG~aia~~l-a~~Ga-~V~~~~r~~~~~~~~~~~l~~~g~~~~~~~~Dvs~~~~~~~~~~~~~~~~-   86 (255)
T d1fmca_          10 DGKCAIITGAGAGIGKEIAITF-ATAGA-SVVVSDINADAANHVVDEIQQLGGQAFACRCDITSEQELSALADFAISKL-   86 (255)
T ss_dssp             TTCEEEETTTTSHHHHHHHHHH-HTTTC-EEEEEESCHHHHHHHHHHHHHTTCCEEEEECCTTCHHHHHHHHHHHHHHH-
T ss_pred             CCCEEEEeCCCcHHHHHHHHHH-HHCCC-EEEEEECCHHHHHHHHHHHHHcCCcEEEEEccCCCHHHHHHHHHHHHHHc-
Confidence            6889999987 99999999945 46699 57778888776543    34455432 222222 2234444444444433 


Q ss_pred             CCceEEEeCCCC
Q 017868          254 TGIDVSFDCAGL  265 (365)
Q Consensus       254 ~~~d~vid~~g~  265 (365)
                      +++|+++.++|.
T Consensus        87 g~iDilvnnAG~   98 (255)
T d1fmca_          87 GKVDILVNNAGG   98 (255)
T ss_dssp             SSCCEEEECCCC
T ss_pred             CCCCEeeeCCcC
Confidence            579999998873

>d1zema1 c.2.1.2 (A:3-262) Xylitol dehydrogenase {Gluconobacter oxydans [TaxId: 442]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Tyrosine-dependent oxidoreductases
domain: Xylitol dehydrogenase
species: Gluconobacter oxydans [TaxId: 442]

Probab=96.47  E-value=0.013  Score=48.27  Aligned_cols=81  Identities=28%  Similarity=0.423  Sum_probs=53.4

Q ss_pred             CCCEEEEEcC-CHHHHHHHHHHHHHCCCCeEEEEeCChhHHHHH----HHcCCCE-EEeCC-CCcccHHHHHHHHHHHhC
Q 017868          181 PETNVLIMGA-GPIGLVTMLGAPRAFGAPRIVIVDVDDYRLSVA----KEIGADN-IVKVS-TNLQDIAEEVEKIQKAMG  253 (365)
Q Consensus       181 ~g~~vlI~G~-g~~G~~ai~~l~~~~g~~~vi~v~~~~~~~~~~----~~~g~~~-~~~~~-~~~~~~~~~i~~~~~~~~  253 (365)
                      +|+++||+|+ +++|.+++..++ ..|+ +|+.+++++++.+.+    ++.|... .+..+ .+.++..+.+++..+.. 
T Consensus         4 ~gK~alITGas~GIG~aia~~la-~~Ga-~V~~~~r~~~~l~~~~~~~~~~g~~~~~~~~Dv~~~~~v~~~~~~~~~~~-   80 (260)
T d1zema1           4 NGKVCLVTGAGGNIGLATALRLA-EEGT-AIALLDMNREALEKAEASVREKGVEARSYVCDVTSEEAVIGTVDSVVRDF-   80 (260)
T ss_dssp             TTCEEEEETTTSHHHHHHHHHHH-HTTC-EEEEEESCHHHHHHHHHHHHTTTSCEEEEECCTTCHHHHHHHHHHHHHHH-
T ss_pred             CCCEEEEeCCCCHHHHHHHHHHH-HCCC-EEEEEECCHHHHHHHHHHHHhcCCcEEEEEccCCCHHHHHHHHHHHHHHh-
Confidence            6889999987 999999999554 5699 688888888776533    3345432 22222 23344445555544433 


Q ss_pred             CCceEEEeCCC
Q 017868          254 TGIDVSFDCAG  264 (365)
Q Consensus       254 ~~~d~vid~~g  264 (365)
                      +++|+++.++|
T Consensus        81 g~iDilVnnaG   91 (260)
T d1zema1          81 GKIDFLFNNAG   91 (260)
T ss_dssp             SCCCEEEECCC
T ss_pred             CCCCeehhhhc
Confidence            57999999877

>d2gdza1 c.2.1.2 (A:3-256) 15-hydroxyprostaglandin dehydrogenase, PGDH {Human (Homo sapiens) [TaxId: 9606]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Tyrosine-dependent oxidoreductases
domain: 15-hydroxyprostaglandin dehydrogenase, PGDH
species: Human (Homo sapiens) [TaxId: 9606]

Probab=96.44  E-value=0.011  Score=48.55  Aligned_cols=82  Identities=17%  Similarity=0.245  Sum_probs=53.0

Q ss_pred             CCCEEEEEcC-CHHHHHHHHHHHHHCCCCeEEEEeCChhHHHHH-HHc----CCCE--EEeCC-CCcccHHHHHHHHHHH
Q 017868          181 PETNVLIMGA-GPIGLVTMLGAPRAFGAPRIVIVDVDDYRLSVA-KEI----GADN--IVKVS-TNLQDIAEEVEKIQKA  251 (365)
Q Consensus       181 ~g~~vlI~G~-g~~G~~ai~~l~~~~g~~~vi~v~~~~~~~~~~-~~~----g~~~--~~~~~-~~~~~~~~~i~~~~~~  251 (365)
                      .|+++||+|+ +++|.++++.++ ..|+ +|+.+++++++.+.+ +++    +...  .+..+ .+.+++.+.+++..+.
T Consensus         2 ~GKvalITGas~GIG~aia~~la-~~Ga-~V~i~~r~~~~~~~~~~~l~~~~~~~~~~~~~~Dv~~~~~v~~~~~~~~~~   79 (254)
T d2gdza1           2 NGKVALVTGAAQGIGRAFAEALL-LKGA-KVALVDWNLEAGVQCKAALHEQFEPQKTLFIQCDVADQQQLRDTFRKVVDH   79 (254)
T ss_dssp             TTCEEEEETTTSHHHHHHHHHHH-HTTC-EEEEEESCHHHHHHHHHHHTTTSCGGGEEEEECCTTSHHHHHHHHHHHHHH
T ss_pred             CCCEEEEeCCCCHHHHHHHHHHH-HCCC-EEEEEECCHHHHHHHHHHHHHhcCCCcEEEEEeecCCHHHHHHHHHHHHHH
Confidence            5789999987 999999999554 5699 688888888775533 333    1111  12222 2334444555555443


Q ss_pred             hCCCceEEEeCCCC
Q 017868          252 MGTGIDVSFDCAGL  265 (365)
Q Consensus       252 ~~~~~d~vid~~g~  265 (365)
                      . +++|++++++|.
T Consensus        80 ~-G~iDilVnnAg~   92 (254)
T d2gdza1          80 F-GRLDILVNNAGV   92 (254)
T ss_dssp             H-SCCCEEEECCCC
T ss_pred             c-CCcCeecccccc
Confidence            3 589999999883

>d1yo6a1 c.2.1.2 (A:1-250) Putative carbonyl reductase sniffer {Caenorhabditis elegans [TaxId: 6239]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Tyrosine-dependent oxidoreductases
domain: Putative carbonyl reductase sniffer
species: Caenorhabditis elegans [TaxId: 6239]

Probab=96.42  E-value=0.0044  Score=50.81  Aligned_cols=82  Identities=18%  Similarity=0.240  Sum_probs=52.3

Q ss_pred             CCEEEEEcC-CHHHHHHHHHHHHHCCCC-eEEEEeCChhHHHHHHHcCCC--EEEeCCC-CcccHHHHHHHHHHHh-CCC
Q 017868          182 ETNVLIMGA-GPIGLVTMLGAPRAFGAP-RIVIVDVDDYRLSVAKEIGAD--NIVKVST-NLQDIAEEVEKIQKAM-GTG  255 (365)
Q Consensus       182 g~~vlI~G~-g~~G~~ai~~l~~~~g~~-~vi~v~~~~~~~~~~~~~g~~--~~~~~~~-~~~~~~~~i~~~~~~~-~~~  255 (365)
                      .++|||+|+ +++|.++++.+++ .|+. +|+.+.++.++.+.+++....  ..+..+- +.++..+..+.+.+.. ..+
T Consensus         3 ~KtilITGassGIG~a~a~~la~-~G~~~~Vi~~~R~~~~~~~l~~~~~~~~~~~~~Dvs~~~~v~~~~~~i~~~~~~~~   81 (250)
T d1yo6a1           3 PGSVVVTGANRGIGLGLVQQLVK-DKNIRHIIATARDVEKATELKSIKDSRVHVLPLTVTCDKSLDTFVSKVGEIVGSDG   81 (250)
T ss_dssp             CSEEEESSCSSHHHHHHHHHHHT-CTTCCEEEEEESSGGGCHHHHTCCCTTEEEEECCTTCHHHHHHHHHHHHHHHGGGC
T ss_pred             CCEEEEeCCCCHHHHHHHHHHHH-CCCCCEEEEEeCCHHHHHHHHHhhCCceEEEEEecCCHHHHHHHHHHHHHHhCCCC
Confidence            378999987 9999999995654 5764 677778888887766664322  2232222 2233333444443332 346


Q ss_pred             ceEEEeCCC
Q 017868          256 IDVSFDCAG  264 (365)
Q Consensus       256 ~d~vid~~g  264 (365)
                      +|+++.++|
T Consensus        82 idilinnAG   90 (250)
T d1yo6a1          82 LSLLINNAG   90 (250)
T ss_dssp             CCEEEECCC
T ss_pred             eEEEEEcCc
Confidence            999999988

>d1nyta1 c.2.1.7 (A:102-271) Shikimate 5-dehydrogenase AroE {Escherichia coli [TaxId: 562]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Aminoacid dehydrogenase-like, C-terminal domain
domain: Shikimate 5-dehydrogenase AroE
species: Escherichia coli [TaxId: 562]

Probab=96.40  E-value=0.01  Score=45.41  Aligned_cols=79  Identities=19%  Similarity=0.265  Sum_probs=51.8

Q ss_pred             HHHhcC-CCCCCEEEEEcCCHHHHHHHHHHHHHCCCCeEEEEeCChhHHHHH-HHcCCCE-EEeCCCCcccHHHHHHHHH
Q 017868          173 ACRRAN-IGPETNVLIMGAGPIGLVTMLGAPRAFGAPRIVIVDVDDYRLSVA-KEIGADN-IVKVSTNLQDIAEEVEKIQ  249 (365)
Q Consensus       173 ~~~~~~-~~~g~~vlI~G~g~~G~~ai~~l~~~~g~~~vi~v~~~~~~~~~~-~~~g~~~-~~~~~~~~~~~~~~i~~~~  249 (365)
                      +++..+ ..+|++|||.|+|+.+.+++. .+...|+ .+..+.++.+|.+.+ +.+.... +.....  .+         
T Consensus         8 ~l~~~~~~~~~k~vlIlGaGGaarai~~-al~~~g~-~i~I~nRt~~ka~~l~~~~~~~~~~~~~~~--~~---------   74 (170)
T d1nyta1           8 DLERLSFIRPGLRILLIGAGGASRGVLL-PLLSLDC-AVTITNRTVSRAEELAKLFAHTGSIQALSM--DE---------   74 (170)
T ss_dssp             HHHHHTCCCTTCEEEEECCSHHHHHHHH-HHHHTTC-EEEEECSSHHHHHHHHHHTGGGSSEEECCS--GG---------
T ss_pred             HHHHcCCCCCCCEEEEECCcHHHHHHHH-Hhcccce-EEEeccchHHHHHHHHHHHhhccccccccc--cc---------
Confidence            444433 457899999999999999998 6677898 577888888876644 4443211 111111  11         


Q ss_pred             HHhCCCceEEEeCCCC
Q 017868          250 KAMGTGIDVSFDCAGL  265 (365)
Q Consensus       250 ~~~~~~~d~vid~~g~  265 (365)
                       .....+|++|+|+..
T Consensus        75 -~~~~~~dliIN~Tp~   89 (170)
T d1nyta1          75 -LEGHEFDLIINATSS   89 (170)
T ss_dssp             -GTTCCCSEEEECCSC
T ss_pred             -ccccccceeeccccc
Confidence             014578999998864

>d2a4ka1 c.2.1.2 (A:2-242) beta-keto acyl carrier protein reductase {Thermus thermophilus, TTHB020 [TaxId: 274]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Tyrosine-dependent oxidoreductases
domain: beta-keto acyl carrier protein reductase
species: Thermus thermophilus, TTHB020 [TaxId: 274]

Probab=96.39  E-value=0.013  Score=47.69  Aligned_cols=81  Identities=20%  Similarity=0.223  Sum_probs=54.6

Q ss_pred             CCCEEEEEcC-CHHHHHHHHHHHHHCCCCeEEEEeCChhHHH-HHHHcCCCEE-EeCCC-CcccHHHHHHHHHHHhCCCc
Q 017868          181 PETNVLIMGA-GPIGLVTMLGAPRAFGAPRIVIVDVDDYRLS-VAKEIGADNI-VKVST-NLQDIAEEVEKIQKAMGTGI  256 (365)
Q Consensus       181 ~g~~vlI~G~-g~~G~~ai~~l~~~~g~~~vi~v~~~~~~~~-~~~~~g~~~~-~~~~~-~~~~~~~~i~~~~~~~~~~~  256 (365)
                      .|+++||+|+ +++|.++++.+ ...|+ +|+.+.+++++.+ ..++++.... +..+- +.++..+.++++.+. -+++
T Consensus         4 ~gK~alItGas~GIG~aia~~l-~~~G~-~V~~~~r~~~~~~~~~~~~~~~~~~~~~Dls~~~~i~~~~~~i~~~-~g~i   80 (241)
T d2a4ka1           4 SGKTILVTGAASGIGRAALDLF-AREGA-SLVAVDREERLLAEAVAALEAEAIAVVADVSDPKAVEAVFAEALEE-FGRL   80 (241)
T ss_dssp             TTCEEEEESTTSHHHHHHHHHH-HHTTC-EEEEEESCHHHHHHHHHTCCSSEEEEECCTTSHHHHHHHHHHHHHH-HSCC
T ss_pred             CCCEEEEeCCCCHHHHHHHHHH-HHCCC-EEEEEECCHHHHHHHHHHcCCceEEEEecCCCHHHHHHHHHHHHHH-hCCc
Confidence            6889999987 89999999944 56699 6777888887765 5577876432 22222 233444444444433 2589


Q ss_pred             eEEEeCCC
Q 017868          257 DVSFDCAG  264 (365)
Q Consensus       257 d~vid~~g  264 (365)
                      |+.|.++|
T Consensus        81 DiLinnAg   88 (241)
T d2a4ka1          81 HGVAHFAG   88 (241)
T ss_dssp             CEEEEGGG
T ss_pred             cEeccccc
Confidence            99999876

>d1xhla_ c.2.1.2 (A:) Hypothetical protein F25D1.5 {Caenorhabditis elegans [TaxId: 6239]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Tyrosine-dependent oxidoreductases
domain: Hypothetical protein F25D1.5
species: Caenorhabditis elegans [TaxId: 6239]

Probab=96.38  E-value=0.012  Score=48.91  Aligned_cols=81  Identities=21%  Similarity=0.274  Sum_probs=52.4

Q ss_pred             CCCEEEEEcC-CHHHHHHHHHHHHHCCCCeEEEEeCChhHHHH----HHHcCCC----EEEeCCC-CcccHHHHHHHHHH
Q 017868          181 PETNVLIMGA-GPIGLVTMLGAPRAFGAPRIVIVDVDDYRLSV----AKEIGAD----NIVKVST-NLQDIAEEVEKIQK  250 (365)
Q Consensus       181 ~g~~vlI~G~-g~~G~~ai~~l~~~~g~~~vi~v~~~~~~~~~----~~~~g~~----~~~~~~~-~~~~~~~~i~~~~~  250 (365)
                      +|+++||+|+ +++|.++++.++ ..|+ +|+.+++++++.+.    +++.+..    ..+..+- +..+..+.+++..+
T Consensus         3 ~gK~alITGas~GIG~aia~~la-~~Ga-~V~~~~r~~~~l~~~~~~i~~~~~~~~~~~~~~~Dv~~~~~v~~~~~~~~~   80 (274)
T d1xhla_           3 SGKSVIITGSSNGIGRSAAVIFA-KEGA-QVTITGRNEDRLEETKQQILKAGVPAEKINAVVADVTEASGQDDIINTTLA   80 (274)
T ss_dssp             TTCEEEETTCSSHHHHHHHHHHH-HTTC-EEEEEESCHHHHHHHHHHHHHTTCCGGGEEEEECCTTSHHHHHHHHHHHHH
T ss_pred             CCCEEEEeCCCcHHHHHHHHHHH-HCCC-EEEEEECCHHHHHHHHHHHHHcCCCCcceEEEEeeCCCHHHHHHHHHHHHH
Confidence            5789999987 999999999554 5699 68888888877553    2334432    1222222 22344444454444


Q ss_pred             HhCCCceEEEeCCC
Q 017868          251 AMGTGIDVSFDCAG  264 (365)
Q Consensus       251 ~~~~~~d~vid~~g  264 (365)
                      .. +++|+++.++|
T Consensus        81 ~~-G~iDilVnnAG   93 (274)
T d1xhla_          81 KF-GKIDILVNNAG   93 (274)
T ss_dssp             HH-SCCCEEEECCC
T ss_pred             Hc-CCceEEEeecc
Confidence            33 58999999877

>d1ja9a_ c.2.1.2 (A:) 1,3,6,8-tetrahydroxynaphthalene reductase {Rice blast fungus (Magnaporthe grisea) [TaxId: 148305]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Tyrosine-dependent oxidoreductases
domain: 1,3,6,8-tetrahydroxynaphthalene reductase
species: Rice blast fungus (Magnaporthe grisea) [TaxId: 148305]

Probab=96.38  E-value=0.0091  Score=49.12  Aligned_cols=105  Identities=18%  Similarity=0.250  Sum_probs=66.7

Q ss_pred             CCCCEEEEEcC-CHHHHHHHHHHHHHCCCCeEEEEeCChhHHH----HHHHcCCCEE-EeCCC-CcccHHHHHHHHHHHh
Q 017868          180 GPETNVLIMGA-GPIGLVTMLGAPRAFGAPRIVIVDVDDYRLS----VAKEIGADNI-VKVST-NLQDIAEEVEKIQKAM  252 (365)
Q Consensus       180 ~~g~~vlI~G~-g~~G~~ai~~l~~~~g~~~vi~v~~~~~~~~----~~~~~g~~~~-~~~~~-~~~~~~~~i~~~~~~~  252 (365)
                      -.|+++||+|+ +++|.+.++ .+...|+++++...++++..+    .+++.|.... +..+- +.++..+.+++..+..
T Consensus         4 L~GK~alITGas~GIG~aia~-~la~~G~~Vvi~~~~~~~~~~~~~~~~~~~g~~~~~~~~D~~~~~~v~~~~~~~~~~~   82 (259)
T d1ja9a_           4 LAGKVALTTGAGRGIGRGIAI-ELGRRGASVVVNYGSSSKAAEEVVAELKKLGAQGVAIQADISKPSEVVALFDKAVSHF   82 (259)
T ss_dssp             TTTCEEEETTTTSHHHHHHHH-HHHHTTCEEEEEESSCHHHHHHHHHHHHHTTCCEEEEECCTTSHHHHHHHHHHHHHHH
T ss_pred             CCCCEEEEeCCCCHHHHHHHH-HHHHcCCEEEEEcCCChHHHHHHHHHHHHcCCCceEecCCCCCHHHHHHHHHHHHHHc
Confidence            46899999987 999999999 445669965555566655433    4455665432 33332 2334444455544433


Q ss_pred             CCCceEEEeCCCCH-------------------------HHHHHHHHhcccCCEEEEEc
Q 017868          253 GTGIDVSFDCAGLN-------------------------KTMSTALGATCAGGKVCLVG  286 (365)
Q Consensus       253 ~~~~d~vid~~g~~-------------------------~~~~~~~~~l~~~G~~~~~g  286 (365)
                       +++|+++.++|..                         ......+..++.+|..+.+.
T Consensus        83 -g~idilinnag~~~~~~~~~~~~~~~~~~~~~n~~~~~~~~~~~~~~m~~~g~~iii~  140 (259)
T d1ja9a_          83 -GGLDFVMSNSGMEVWCDELEVTQELFDKVFNLNTRGQFFVAQQGLKHCRRGGRIILTS  140 (259)
T ss_dssp             -SCEEEEECCCCCCCCCCGGGCCHHHHHHHHHHHTHHHHHHHHHHHHHEEEEEEEEEEC
T ss_pred             -CCCcEEEeccccccccccccchHHHHHHHHhhccceeeeehhhhhhhhhcCCcccccc
Confidence             5799999988832                         13334666777888877764

>d1ulua_ c.2.1.2 (A:) Enoyl-ACP reductase {Thermus thermophilus [TaxId: 274]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Tyrosine-dependent oxidoreductases
domain: Enoyl-ACP reductase
species: Thermus thermophilus [TaxId: 274]

Probab=96.36  E-value=0.013  Score=47.94  Aligned_cols=81  Identities=14%  Similarity=0.268  Sum_probs=50.8

Q ss_pred             CCCEEEEEcC-C--HHHHHHHHHHHHHCCCCeEEEEeCChhHHHH----HHHcCCCEEEeCCC-CcccHHHHHHHHHHHh
Q 017868          181 PETNVLIMGA-G--PIGLVTMLGAPRAFGAPRIVIVDVDDYRLSV----AKEIGADNIVKVST-NLQDIAEEVEKIQKAM  252 (365)
Q Consensus       181 ~g~~vlI~G~-g--~~G~~ai~~l~~~~g~~~vi~v~~~~~~~~~----~~~~g~~~~~~~~~-~~~~~~~~i~~~~~~~  252 (365)
                      +|+++||+|+ |  ++|.++++.++ ..|+ +|+.++++++..+.    .+..+....+..+- +.++..+.+.+..+..
T Consensus         7 ~gK~alITGas~~~GIG~aiA~~la-~~Ga-~V~i~~~~~~~~~~~~~~~~~~~~~~~~~~D~~~~~~v~~~~~~~~~~~   84 (256)
T d1ulua_           7 SGKKALVMGVTNQRSLGFAIAAKLK-EAGA-EVALSYQAERLRPEAEKLAEALGGALLFRADVTQDEELDALFAGVKEAF   84 (256)
T ss_dssp             TTCEEEEESCCCSSSHHHHHHHHHH-HTTC-EEEEEESSGGGHHHHHHHHHHTTCCEEEECCTTCHHHHHHHHHHHHHHH
T ss_pred             CCCEEEEECCCCCchHHHHHHHHHH-HCCC-EEEEEeCcHHHHHHHHHhhhccCcccccccccCCHHHHHHHHHHHHHhc
Confidence            5789999997 5  69999999555 5599 46677777654432    33344444444333 2234444444444433


Q ss_pred             CCCceEEEeCCC
Q 017868          253 GTGIDVSFDCAG  264 (365)
Q Consensus       253 ~~~~d~vid~~g  264 (365)
                       +++|++++++|
T Consensus        85 -g~iDilVnnag   95 (256)
T d1ulua_          85 -GGLDYLVHAIA   95 (256)
T ss_dssp             -SSEEEEEECCC
T ss_pred             -CCceEEEeccc
Confidence             58999999886

>d1nkva_ c.66.1.21 (A:) Hypothetical Protein YjhP {Escherichia coli [TaxId: 562]}

class: Alpha and beta proteins (a/b)
fold: S-adenosyl-L-methionine-dependent methyltransferases
superfamily: S-adenosyl-L-methionine-dependent methyltransferases
family: Hypothetical Protein YjhP
domain: Hypothetical Protein YjhP
species: Escherichia coli [TaxId: 562]

Probab=96.34  E-value=0.019  Score=46.59  Aligned_cols=98  Identities=19%  Similarity=0.254  Sum_probs=67.0

Q ss_pred             HhcCCCCCCEEEEEcCCHHHHHHHHHHHHHCCCCeEEEEeCChhHHHHHH----HcCCCE---EEeCCCCcccHHHHHHH
Q 017868          175 RRANIGPETNVLIMGAGPIGLVTMLGAPRAFGAPRIVIVDVDDYRLSVAK----EIGADN---IVKVSTNLQDIAEEVEK  247 (365)
Q Consensus       175 ~~~~~~~g~~vlI~G~g~~G~~ai~~l~~~~g~~~vi~v~~~~~~~~~~~----~~g~~~---~~~~~~~~~~~~~~i~~  247 (365)
                      ...++++|++||=+|+|. |..+.. +++..|+ .+++++.++.-.+.++    +.|...   .+.  .+..++      
T Consensus        27 ~~~~l~pg~~VLDiGCG~-G~~~~~-la~~~~~-~v~GvD~s~~~~~~ar~~~~~~gl~~~v~~~~--~d~~~~------   95 (245)
T d1nkva_          27 RVLRMKPGTRILDLGSGS-GEMLCT-WARDHGI-TGTGIDMSSLFTAQAKRRAEELGVSERVHFIH--NDAAGY------   95 (245)
T ss_dssp             HHTCCCTTCEEEEETCTT-CHHHHH-HHHHTCC-EEEEEESCHHHHHHHHHHHHHTTCTTTEEEEE--SCCTTC------
T ss_pred             HHcCCCCCCEEEEEcCCC-CHHHHH-HHHhcCC-EEEEEecccchhhHHHHHHHHhhccccchhhh--hHHhhc------
Confidence            678999999999999854 556666 7777787 7899999987765544    446432   222  111111      


Q ss_pred             HHHHhCCCceEEEeCC------CCHHHHHHHHHhcccCCEEEEEc
Q 017868          248 IQKAMGTGIDVSFDCA------GLNKTMSTALGATCAGGKVCLVG  286 (365)
Q Consensus       248 ~~~~~~~~~d~vid~~------g~~~~~~~~~~~l~~~G~~~~~g  286 (365)
                         ...+.+|+|+..-      .-...+..+.+.|+|+|++++..
T Consensus        96 ---~~~~~fD~v~~~~~~~~~~d~~~~l~~~~r~LkPGG~l~i~~  137 (245)
T d1nkva_          96 ---VANEKCDVAACVGATWIAGGFAGAEELLAQSLKPGGIMLIGE  137 (245)
T ss_dssp             ---CCSSCEEEEEEESCGGGTSSSHHHHHHHTTSEEEEEEEEEEE
T ss_pred             ---cccCceeEEEEEehhhccCCHHHHHHHHHHHcCcCcEEEEEe
Confidence               1246899998521      23457778889999999998753

>d1o5ia_ c.2.1.2 (A:) beta-keto acyl carrier protein reductase {Thermotoga maritima [TaxId: 2336]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Tyrosine-dependent oxidoreductases
domain: beta-keto acyl carrier protein reductase
species: Thermotoga maritima [TaxId: 2336]

Probab=96.33  E-value=0.012  Score=47.47  Aligned_cols=72  Identities=21%  Similarity=0.243  Sum_probs=47.1

Q ss_pred             CCCEEEEEcC-CHHHHHHHHHHHHHCCCCeEEEEeCChhHHHHHHHcCCCEEEeCCCCcccHHHHHHHHHHHhCCCceEE
Q 017868          181 PETNVLIMGA-GPIGLVTMLGAPRAFGAPRIVIVDVDDYRLSVAKEIGADNIVKVSTNLQDIAEEVEKIQKAMGTGIDVS  259 (365)
Q Consensus       181 ~g~~vlI~G~-g~~G~~ai~~l~~~~g~~~vi~v~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~i~~~~~~~~~~~d~v  259 (365)
                      +|+++||+|+ +++|.++++.+ ...|+ +|+.+++++++.   ++.+.... ..+- ..+.    ....+. -+.+|++
T Consensus         3 kgK~~lVTGas~GIG~aia~~l-~~~Ga-~V~~~~r~~~~l---~~~~~~~~-~~Dv-~~~~----~~~~~~-~g~iD~l   70 (234)
T d1o5ia_           3 RDKGVLVLAASRGIGRAVADVL-SQEGA-EVTICARNEELL---KRSGHRYV-VCDL-RKDL----DLLFEK-VKEVDIL   70 (234)
T ss_dssp             TTCEEEEESCSSHHHHHHHHHH-HHTTC-EEEEEESCHHHH---HHTCSEEE-ECCT-TTCH----HHHHHH-SCCCSEE
T ss_pred             CCCEEEEeCCCcHHHHHHHHHH-HHCCC-EEEEEECCHHHH---HhcCCcEE-Ecch-HHHH----HHHHHH-hCCCcEE
Confidence            5789999987 99999999944 56699 577888876554   45554332 2221 1222    222222 3579999


Q ss_pred             EeCCC
Q 017868          260 FDCAG  264 (365)
Q Consensus       260 id~~g  264 (365)
                      +.++|
T Consensus        71 VnnAG   75 (234)
T d1o5ia_          71 VLNAG   75 (234)
T ss_dssp             EECCC
T ss_pred             Eeccc
Confidence            99887

>d1iy8a_ c.2.1.2 (A:) Levodione reductase {Corynebacterium aquaticum [TaxId: 144185]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Tyrosine-dependent oxidoreductases
domain: Levodione reductase
species: Corynebacterium aquaticum [TaxId: 144185]

Probab=96.32  E-value=0.017  Score=47.32  Aligned_cols=81  Identities=25%  Similarity=0.326  Sum_probs=51.8

Q ss_pred             CCCEEEEEcC-CHHHHHHHHHHHHHCCCCeEEEEeCChhHHHHH-HH---c--CCCE-EEeCC-CCcccHHHHHHHHHHH
Q 017868          181 PETNVLIMGA-GPIGLVTMLGAPRAFGAPRIVIVDVDDYRLSVA-KE---I--GADN-IVKVS-TNLQDIAEEVEKIQKA  251 (365)
Q Consensus       181 ~g~~vlI~G~-g~~G~~ai~~l~~~~g~~~vi~v~~~~~~~~~~-~~---~--g~~~-~~~~~-~~~~~~~~~i~~~~~~  251 (365)
                      +|+++||+|+ +++|.++++.++ ..|+ +|+.+++++++.+.+ ++   .  +... .+..+ .+.++..+.+.+..+.
T Consensus         3 ~gK~alITGas~GIG~aia~~la-~~Ga-~V~i~~r~~~~l~~~~~~~~~~~~~~~~~~~~~Dvt~~~~v~~~~~~~~~~   80 (258)
T d1iy8a_           3 TDRVVLITGGGSGLGRATAVRLA-AEGA-KLSLVDVSSEGLEASKAAVLETAPDAEVLTTVADVSDEAQVEAYVTATTER   80 (258)
T ss_dssp             TTCEEEEETTTSHHHHHHHHHHH-HTTC-EEEEEESCHHHHHHHHHHHHHHCTTCCEEEEECCTTSHHHHHHHHHHHHHH
T ss_pred             CCCEEEEeCCCCHHHHHHHHHHH-HCCC-EEEEEECCHHHHHHHHHHHHhhCCCCeEEEEeccCCCHHHHHHHHHHHHHH
Confidence            5788999987 999999999554 5699 688888888775432 21   1  2221 12222 2334454455554443


Q ss_pred             hCCCceEEEeCCC
Q 017868          252 MGTGIDVSFDCAG  264 (365)
Q Consensus       252 ~~~~~d~vid~~g  264 (365)
                      . +++|++++++|
T Consensus        81 ~-G~iDiLVnnAG   92 (258)
T d1iy8a_          81 F-GRIDGFFNNAG   92 (258)
T ss_dssp             H-SCCSEEEECCC
T ss_pred             h-CCCCEEEECCc
Confidence            3 58999999887

>d1xkqa_ c.2.1.2 (A:) Hypothetical protein R05D8.7 {Caenorhabditis elegans [TaxId: 6239]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Tyrosine-dependent oxidoreductases
domain: Hypothetical protein R05D8.7
species: Caenorhabditis elegans [TaxId: 6239]

Probab=96.31  E-value=0.0086  Score=49.69  Aligned_cols=81  Identities=25%  Similarity=0.282  Sum_probs=52.2

Q ss_pred             CCCEEEEEcC-CHHHHHHHHHHHHHCCCCeEEEEeCChhHHHHH----HHcCCC----EEEeCCC-CcccHHHHHHHHHH
Q 017868          181 PETNVLIMGA-GPIGLVTMLGAPRAFGAPRIVIVDVDDYRLSVA----KEIGAD----NIVKVST-NLQDIAEEVEKIQK  250 (365)
Q Consensus       181 ~g~~vlI~G~-g~~G~~ai~~l~~~~g~~~vi~v~~~~~~~~~~----~~~g~~----~~~~~~~-~~~~~~~~i~~~~~  250 (365)
                      +|+++||+|+ +++|.++++.+ ...|+ +|+.+++++++.+.+    ++.+..    ..+..+- +.++....+++..+
T Consensus         4 ~gK~alVTGas~GIG~aia~~l-a~~Ga-~V~l~~r~~~~l~~~~~~l~~~~~~~~~~~~~~~Dvs~~~~v~~~~~~~~~   81 (272)
T d1xkqa_           4 SNKTVIITGSSNGIGRTTAILF-AQEGA-NVTITGRSSERLEETRQIILKSGVSEKQVNSVVADVTTEDGQDQIINSTLK   81 (272)
T ss_dssp             TTCEEEETTCSSHHHHHHHHHH-HHTTC-EEEEEESCHHHHHHHHHHHHTTTCCGGGEEEEECCTTSHHHHHHHHHHHHH
T ss_pred             CCCEEEEeCcCcHHHHHHHHHH-HHCCC-EEEEEECCHHHHHHHHHHHHhcCCCCCceEEEEccCCCHHHHHHHHHHHHH
Confidence            5788999987 99999999945 45699 688888888776533    233321    1222222 23344444555444


Q ss_pred             HhCCCceEEEeCCC
Q 017868          251 AMGTGIDVSFDCAG  264 (365)
Q Consensus       251 ~~~~~~d~vid~~g  264 (365)
                      .. +++|+++.++|
T Consensus        82 ~~-g~iDilvnnAG   94 (272)
T d1xkqa_          82 QF-GKIDVLVNNAG   94 (272)
T ss_dssp             HH-SCCCEEEECCC
T ss_pred             Hh-CCceEEEeCCc
Confidence            33 58999999877

>d1g0oa_ c.2.1.2 (A:) 1,3,8-trihydroxynaphtalene reductase (THNR, naphtol reductase) {Rice blast fungus (Magnaporthe grisea) [TaxId: 148305]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Tyrosine-dependent oxidoreductases
domain: 1,3,8-trihydroxynaphtalene reductase (THNR, naphtol reductase)
species: Rice blast fungus (Magnaporthe grisea) [TaxId: 148305]

Probab=96.31  E-value=0.026  Score=46.60  Aligned_cols=104  Identities=20%  Similarity=0.266  Sum_probs=65.6

Q ss_pred             CCCEEEEEcC-CHHHHHHHHHHHHHCCCCeEEEEeCC-hhHHH----HHHHcCCCEEE-eCCC-CcccHHHHHHHHHHHh
Q 017868          181 PETNVLIMGA-GPIGLVTMLGAPRAFGAPRIVIVDVD-DYRLS----VAKEIGADNIV-KVST-NLQDIAEEVEKIQKAM  252 (365)
Q Consensus       181 ~g~~vlI~G~-g~~G~~ai~~l~~~~g~~~vi~v~~~-~~~~~----~~~~~g~~~~~-~~~~-~~~~~~~~i~~~~~~~  252 (365)
                      +|+++||+|+ +++|.++++.+ ...|++ |+.++++ +++.+    .+++.+..... ..+- +.+++.+.++++.+..
T Consensus        17 ~gK~~lITGas~GIG~aia~~l-a~~Ga~-Vvi~~~~~~~~~~~~~~~~~~~g~~~~~~~~D~~~~~~v~~~~~~~~~~~   94 (272)
T d1g0oa_          17 EGKVALVTGAGRGIGREMAMEL-GRRGCK-VIVNYANSTESAEEVVAAIKKNGSDAACVKANVGVVEDIVRMFEEAVKIF   94 (272)
T ss_dssp             TTCEEEETTTTSHHHHHHHHHH-HHTTCE-EEEEESSCHHHHHHHHHHHHHTTCCEEEEECCTTCHHHHHHHHHHHHHHH
T ss_pred             CCCEEEEeCCCCHHHHHHHHHH-HHcCCE-EEEEeCCchHHHHHHHHHHHhhCCceeeEeCCCCCHHHHHHHHHHHHHHh
Confidence            5789999987 99999999945 456995 5555444 44332    34555654322 2222 3345555555555443


Q ss_pred             CCCceEEEeCCCCH-------------------------HHHHHHHHhcccCCEEEEEcc
Q 017868          253 GTGIDVSFDCAGLN-------------------------KTMSTALGATCAGGKVCLVGM  287 (365)
Q Consensus       253 ~~~~d~vid~~g~~-------------------------~~~~~~~~~l~~~G~~~~~g~  287 (365)
                       +++|+++.+.|..                         .........|..+|+.+.++.
T Consensus        95 -g~idilV~nag~~~~~~~~~~~~~~~~~~~~~nl~~~~~~~~~~~~~m~~~g~~i~i~s  153 (272)
T d1g0oa_          95 -GKLDIVCSNSGVVSFGHVKDVTPEEFDRVFTINTRGQFFVAREAYKHLEIGGRLILMGS  153 (272)
T ss_dssp             -SCCCEEEECCCCCCCCCGGGCCHHHHHHHHHHHTHHHHHHHHHHHHHSCTTCEEEEECC
T ss_pred             -CCCCccccccccchhhhhhhhhhhHHHHHhhhccceeeeeccccccccccccccccccc
Confidence             5899999988732                         123346667788888888753

>d1yxma1 c.2.1.2 (A:7-303) Peroxisomal trans 2-enoyl CoA reductase {Human (Homo sapiens) [TaxId: 9606]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Tyrosine-dependent oxidoreductases
domain: Peroxisomal trans 2-enoyl CoA reductase
species: Human (Homo sapiens) [TaxId: 9606]

Probab=96.28  E-value=0.018  Score=48.32  Aligned_cols=82  Identities=18%  Similarity=0.236  Sum_probs=52.2

Q ss_pred             CCCCEEEEEcC-CHHHHHHHHHHHHHCCCCeEEEEeCChhHHHH-HHHc--------CCCE-EEeCCC-CcccHHHHHHH
Q 017868          180 GPETNVLIMGA-GPIGLVTMLGAPRAFGAPRIVIVDVDDYRLSV-AKEI--------GADN-IVKVST-NLQDIAEEVEK  247 (365)
Q Consensus       180 ~~g~~vlI~G~-g~~G~~ai~~l~~~~g~~~vi~v~~~~~~~~~-~~~~--------g~~~-~~~~~~-~~~~~~~~i~~  247 (365)
                      -+|+++||+|+ +++|.++++.++ ..|+ +|+.+++++++.+. ++++        +... .+..+- +.++..+.+++
T Consensus        10 L~gKvalITGas~GIG~aia~~la-~~Ga-~Vvi~~r~~~~l~~~~~el~~~~~~~~~~~~~~~~~Dvs~~~~v~~~~~~   87 (297)
T d1yxma1          10 LQGQVAIVTGGATGIGKAIVKELL-ELGS-NVVIASRKLERLKSAADELQANLPPTKQARVIPIQCNIRNEEEVNNLVKS   87 (297)
T ss_dssp             TTTCEEEEETTTSHHHHHHHHHHH-HTTC-EEEEEESCHHHHHHHHHHHHHTSCTTCCCCEEEEECCTTCHHHHHHHHHH
T ss_pred             CCCCEEEEeCCCCHHHHHHHHHHH-HCCC-EEEEEECCHHHHHHHHHHHHhhhccccCceEEEEeccCCCHHHHHHHHHH
Confidence            47889999987 999999999454 5699 67888888776543 2332        2221 122222 23344444544


Q ss_pred             HHHHhCCCceEEEeCCC
Q 017868          248 IQKAMGTGIDVSFDCAG  264 (365)
Q Consensus       248 ~~~~~~~~~d~vid~~g  264 (365)
                      ..+.. +++|++++++|
T Consensus        88 ~~~~~-G~iDiLVnnAg  103 (297)
T d1yxma1          88 TLDTF-GKINFLVNNGG  103 (297)
T ss_dssp             HHHHH-SCCCEEEECCC
T ss_pred             HHHHh-CCeEEEEeecc
Confidence            44433 57999999887

>d2rhca1 c.2.1.2 (A:5-261) beta-keto acyl carrier protein reductase {Streptomyces coelicolor [TaxId: 1902]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Tyrosine-dependent oxidoreductases
domain: beta-keto acyl carrier protein reductase
species: Streptomyces coelicolor [TaxId: 1902]

Probab=96.26  E-value=0.022  Score=46.62  Aligned_cols=81  Identities=21%  Similarity=0.247  Sum_probs=52.0

Q ss_pred             CCEEEEEcC-CHHHHHHHHHHHHHCCCCeEEEEeCChhHHHH----HHHcCCCEE-EeCC-CCcccHHHHHHHHHHHhCC
Q 017868          182 ETNVLIMGA-GPIGLVTMLGAPRAFGAPRIVIVDVDDYRLSV----AKEIGADNI-VKVS-TNLQDIAEEVEKIQKAMGT  254 (365)
Q Consensus       182 g~~vlI~G~-g~~G~~ai~~l~~~~g~~~vi~v~~~~~~~~~----~~~~g~~~~-~~~~-~~~~~~~~~i~~~~~~~~~  254 (365)
                      |+.+||+|+ +++|.++++.++ ..|+ +|+.+++++++.+.    +++.|.... +..+ .+.++..+.+++..+. -+
T Consensus         2 gKValITGas~GIG~aia~~la-~~Ga-~V~i~~r~~~~l~~~~~~l~~~g~~~~~~~~Dvs~~~~v~~~~~~~~~~-~g   78 (257)
T d2rhca1           2 SEVALVTGATSGIGLEIARRLG-KEGL-RVFVCARGEEGLRTTLKELREAGVEADGRTCDVRSVPEIEALVAAVVER-YG   78 (257)
T ss_dssp             CCEEEEESCSSHHHHHHHHHHH-HTTC-EEEEEESCHHHHHHHHHHHHHTTCCEEEEECCTTCHHHHHHHHHHHHHH-TC
T ss_pred             CCEEEEeCCCCHHHHHHHHHHH-HCCC-EEEEEECCHHHHHHHHHHHHhcCCcEEEEEeecCCHHHHHHHHHHHHHH-hC
Confidence            567799987 999999999554 5599 57778888776543    344554322 2222 2233444444444443 46


Q ss_pred             CceEEEeCCCC
Q 017868          255 GIDVSFDCAGL  265 (365)
Q Consensus       255 ~~d~vid~~g~  265 (365)
                      ++|+++.++|.
T Consensus        79 ~iDilVnnAG~   89 (257)
T d2rhca1          79 PVDVLVNNAGR   89 (257)
T ss_dssp             SCSEEEECCCC
T ss_pred             CCCEEEecccc
Confidence            89999998873

>d1h5qa_ c.2.1.2 (A:) Mannitol dehydrogenase {Mushroom (Agaricus bisporus) [TaxId: 5341]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Tyrosine-dependent oxidoreductases
domain: Mannitol dehydrogenase
species: Mushroom (Agaricus bisporus) [TaxId: 5341]

Probab=96.22  E-value=0.013  Score=48.12  Aligned_cols=81  Identities=20%  Similarity=0.277  Sum_probs=51.7

Q ss_pred             CCCEEEEEcC-CHHHHHHHHHHHHHCCCCeEEEEeCChhHHH-----HHHHcCCCE-EEeCCC-CcccHHHHHHHHHHHh
Q 017868          181 PETNVLIMGA-GPIGLVTMLGAPRAFGAPRIVIVDVDDYRLS-----VAKEIGADN-IVKVST-NLQDIAEEVEKIQKAM  252 (365)
Q Consensus       181 ~g~~vlI~G~-g~~G~~ai~~l~~~~g~~~vi~v~~~~~~~~-----~~~~~g~~~-~~~~~~-~~~~~~~~i~~~~~~~  252 (365)
                      +|+++||+|+ +++|.++++.++ ..|+ +|+.+++++++.+     +.++.|... .+..+- +.++..+.+++..+. 
T Consensus         8 ~gK~alITGas~GIG~aia~~la-~~Ga-~V~i~~r~~~~~~~~~~~~~~~~g~~~~~~~~Dv~~~~~v~~~~~~~~~~-   84 (260)
T d1h5qa_           8 VNKTIIVTGGNRGIGLAFTRAVA-AAGA-NVAVIYRSAADAVEVTEKVGKEFGVKTKAYQCDVSNTDIVTKTIQQIDAD-   84 (260)
T ss_dssp             TTEEEEEETTTSHHHHHHHHHHH-HTTE-EEEEEESSCTTHHHHHHHHHHHHTCCEEEEECCTTCHHHHHHHHHHHHHH-
T ss_pred             CCCEEEEeCCCCHHHHHHHHHHH-HCCC-EEEEEECCHHHHHHHHHHHHHHhCCceEEEEccCCCHHHHHHHHHHHHHH-
Confidence            5788999987 999999999555 5699 5777777765432     334456432 222222 233444444444443 


Q ss_pred             CCCceEEEeCCC
Q 017868          253 GTGIDVSFDCAG  264 (365)
Q Consensus       253 ~~~~d~vid~~g  264 (365)
                      -+++|+++.+.|
T Consensus        85 ~g~iDilVnnAg   96 (260)
T d1h5qa_          85 LGPISGLIANAG   96 (260)
T ss_dssp             SCSEEEEEECCC
T ss_pred             hCCCcEeccccc
Confidence            468999999887

>d2ew8a1 c.2.1.2 (A:3-249) (s)-1-phenylethanol dehydrogenase {Azoarcus sp. ebn1 [TaxId: 76114]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Tyrosine-dependent oxidoreductases
domain: (s)-1-phenylethanol dehydrogenase
species: Azoarcus sp. ebn1 [TaxId: 76114]

Probab=96.19  E-value=0.023  Score=46.24  Aligned_cols=82  Identities=20%  Similarity=0.254  Sum_probs=52.7

Q ss_pred             CCCEEEEEcC-CHHHHHHHHHHHHHCCCCeEEEEeCChh--HHHHHHHcCCCEE-EeCC-CCcccHHHHHHHHHHHhCCC
Q 017868          181 PETNVLIMGA-GPIGLVTMLGAPRAFGAPRIVIVDVDDY--RLSVAKEIGADNI-VKVS-TNLQDIAEEVEKIQKAMGTG  255 (365)
Q Consensus       181 ~g~~vlI~G~-g~~G~~ai~~l~~~~g~~~vi~v~~~~~--~~~~~~~~g~~~~-~~~~-~~~~~~~~~i~~~~~~~~~~  255 (365)
                      +|+++||+|+ +++|.++++.+ ...|+ +|+.++++++  ..+.++++|.... +..+ .+.++....+++..+.. ++
T Consensus         4 ~gKvalVTGas~GIG~aia~~l-a~~Ga-~V~~~~~~~~~~~~~~~~~~g~~~~~~~~Dvs~~~~v~~~~~~~~~~~-G~   80 (247)
T d2ew8a1           4 KDKLAVITGGANGIGRAIAERF-AVEGA-DIAIADLVPAPEAEAAIRNLGRRVLTVKCDVSQPGDVEAFGKQVISTF-GR   80 (247)
T ss_dssp             TTCEEEEETTTSHHHHHHHHHH-HHTTC-EEEEEESSCCHHHHHHHHHTTCCEEEEECCTTCHHHHHHHHHHHHHHH-SC
T ss_pred             CCCEEEEeCCCCHHHHHHHHHH-HHCCC-EEEEEECCchHHHHHHHHHcCCcEEEEEeeCCCHHHHHHHHHHHHHHc-CC
Confidence            5788999987 99999999945 56699 5677776543  2345677775432 2222 22344444444444433 58


Q ss_pred             ceEEEeCCCC
Q 017868          256 IDVSFDCAGL  265 (365)
Q Consensus       256 ~d~vid~~g~  265 (365)
                      +|+++.++|.
T Consensus        81 iDilVnnAG~   90 (247)
T d2ew8a1          81 CDILVNNAGI   90 (247)
T ss_dssp             CCEEEECCCC
T ss_pred             CCEEEECCCC
Confidence            9999998883

>d1xxla_ c.66.1.41 (A:) Hypothetical protein YcgJ {Bacillus subtilis [TaxId: 1423]}

class: Alpha and beta proteins (a/b)
fold: S-adenosyl-L-methionine-dependent methyltransferases
superfamily: S-adenosyl-L-methionine-dependent methyltransferases
family: UbiE/COQ5-like
domain: Hypothetical protein YcgJ
species: Bacillus subtilis [TaxId: 1423]

Probab=96.18  E-value=0.0083  Score=48.46  Aligned_cols=101  Identities=20%  Similarity=0.210  Sum_probs=66.5

Q ss_pred             HHhcCCCCCCEEEEEcCCHHHHHHHHHHHHHCCCCeEEEEeCChhHHHHH----HHcCCCEEEeCCCCcccHHHHHHHHH
Q 017868          174 CRRANIGPETNVLIMGAGPIGLVTMLGAPRAFGAPRIVIVDVDDYRLSVA----KEIGADNIVKVSTNLQDIAEEVEKIQ  249 (365)
Q Consensus       174 ~~~~~~~~g~~vlI~G~g~~G~~ai~~l~~~~g~~~vi~v~~~~~~~~~~----~~~g~~~~~~~~~~~~~~~~~i~~~~  249 (365)
                      ++.+.+++|++||=.|+|. |..+.. +++. +. .++++|.++.-.+.+    ++.+...+.....+.+++.       
T Consensus         9 ~~~~~~~~~~rILDiGcGt-G~~~~~-la~~-~~-~v~gvD~S~~~l~~A~~~~~~~~~~~~~~~~~d~~~~~-------   77 (234)
T d1xxla_           9 IKTAECRAEHRVLDIGAGA-GHTALA-FSPY-VQ-ECIGVDATKEMVEVASSFAQEKGVENVRFQQGTAESLP-------   77 (234)
T ss_dssp             HHHHTCCTTCEEEEESCTT-SHHHHH-HGGG-SS-EEEEEESCHHHHHHHHHHHHHHTCCSEEEEECBTTBCC-------
T ss_pred             HHHhCCCCCCEEEEeCCcC-cHHHHH-HHHh-CC-eEEEEeCChhhhhhhhhhhccccccccccccccccccc-------
Confidence            3678999999999999865 777777 7665 55 799999998766544    3334432222112222210       


Q ss_pred             HHhCCCceEEEeCCC------CHHHHHHHHHhcccCCEEEEEc
Q 017868          250 KAMGTGIDVSFDCAG------LNKTMSTALGATCAGGKVCLVG  286 (365)
Q Consensus       250 ~~~~~~~d~vid~~g------~~~~~~~~~~~l~~~G~~~~~g  286 (365)
                       ...+.+|+|+.+-.      -...+..+.++|+|+|.++...
T Consensus        78 -~~~~~fD~v~~~~~l~~~~d~~~~l~~~~r~LkpgG~~~~~~  119 (234)
T d1xxla_          78 -FPDDSFDIITCRYAAHHFSDVRKAVREVARVLKQDGRFLLVD  119 (234)
T ss_dssp             -SCTTCEEEEEEESCGGGCSCHHHHHHHHHHHEEEEEEEEEEE
T ss_pred             -ccccccceeeeeceeecccCHHHHHHHHHHeeCCCcEEEEEE
Confidence             01467999986332      2356778999999999988753

>d1e5qa1 c.2.1.3 (A:2-124,A:392-450) Saccharopine reductase {Rice blast fungus (Magnaporthe grisea) [TaxId: 148305]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Glyceraldehyde-3-phosphate dehydrogenase-like, N-terminal domain
domain: Saccharopine reductase
species: Rice blast fungus (Magnaporthe grisea) [TaxId: 148305]

Probab=96.15  E-value=0.026  Score=42.98  Aligned_cols=97  Identities=9%  Similarity=0.039  Sum_probs=61.0

Q ss_pred             CCCEEEEEcCCHHHHHHHHHHHHHCCCCeEEEEeCChhHHHHH-HHcCCCEEEeCCCCcccHHHHHHHHHHHhCCCceEE
Q 017868          181 PETNVLIMGAGPIGLVTMLGAPRAFGAPRIVIVDVDDYRLSVA-KEIGADNIVKVSTNLQDIAEEVEKIQKAMGTGIDVS  259 (365)
Q Consensus       181 ~g~~vlI~G~g~~G~~ai~~l~~~~g~~~vi~v~~~~~~~~~~-~~~g~~~~~~~~~~~~~~~~~i~~~~~~~~~~~d~v  259 (365)
                      ++++|||.|+|.+|..+++.| ...|. .|++++++.++.+.+ +.++.........   +......+.    -...|.+
T Consensus         1 ~~K~IliiGaG~~G~~~a~~L-~~~g~-~V~v~dr~~~~a~~l~~~~~~~~~~~~~~---~~~~~~~~~----i~~~~~~   71 (182)
T d1e5qa1           1 ATKSVLMLGSGFVTRPTLDVL-TDSGI-KVTVACRTLESAKKLSAGVQHSTPISLDV---NDDAALDAE----VAKHDLV   71 (182)
T ss_dssp             CCCEEEEECCSTTHHHHHHHH-HTTTC-EEEEEESCHHHHHHHHTTCTTEEEEECCT---TCHHHHHHH----HTTSSEE
T ss_pred             CCCEEEEECCCHHHHHHHHHH-HhCCC-EEEEEECChHHHHHHHhcccccccccccc---cchhhhHhh----hhcccee
Confidence            367999999999999999944 55588 688999999988765 4455433332111   222222222    1467888


Q ss_pred             EeCCCCHHHHHHHHHhcccCCEEEEEc
Q 017868          260 FDCAGLNKTMSTALGATCAGGKVCLVG  286 (365)
Q Consensus       260 id~~g~~~~~~~~~~~l~~~G~~~~~g  286 (365)
                      +.+............+...+-.++...
T Consensus        72 i~~~~~~~~~~~~~~~~~~~~~~~~~~   98 (182)
T d1e5qa1          72 ISLIPYTFHATVIKSAIRQKKHVVTTS   98 (182)
T ss_dssp             EECSCGGGHHHHHHHHHHHTCEEECSS
T ss_pred             EeeccchhhhHHHHHHHhhccceeecc
Confidence            877765544445555566666665543

>d1lssa_ c.2.1.9 (A:) Ktn Mja218 {Archaeon Methanococcus jannaschii [TaxId: 2190]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Potassium channel NAD-binding domain
domain: Ktn Mja218
species: Archaeon Methanococcus jannaschii [TaxId: 2190]

Probab=96.15  E-value=0.048  Score=39.39  Aligned_cols=74  Identities=23%  Similarity=0.288  Sum_probs=51.8

Q ss_pred             EEEEEcCCHHHHHHHHHHHHHCCCCeEEEEeCChhHHHHHH-HcCCCEEEeCCCCcccHHHHHHHHHHHhCCCceEEEeC
Q 017868          184 NVLIMGAGPIGLVTMLGAPRAFGAPRIVIVDVDDYRLSVAK-EIGADNIVKVSTNLQDIAEEVEKIQKAMGTGIDVSFDC  262 (365)
Q Consensus       184 ~vlI~G~g~~G~~ai~~l~~~~g~~~vi~v~~~~~~~~~~~-~~g~~~~~~~~~~~~~~~~~i~~~~~~~~~~~d~vid~  262 (365)
                      +|+|.|+|.+|..+++ .+...|. .|++++.++++.+.+. +++.. ++.-+..+++   .+++   ..-..+|.++.+
T Consensus         2 ~IvI~G~G~~G~~la~-~L~~~g~-~v~vid~d~~~~~~~~~~~~~~-vi~Gd~~~~~---~l~~---~~i~~a~~vv~~   72 (132)
T d1lssa_           2 YIIIAGIGRVGYTLAK-SLSEKGH-DIVLIDIDKDICKKASAEIDAL-VINGDCTKIK---TLED---AGIEDADMYIAV   72 (132)
T ss_dssp             EEEEECCSHHHHHHHH-HHHHTTC-EEEEEESCHHHHHHHHHHCSSE-EEESCTTSHH---HHHH---TTTTTCSEEEEC
T ss_pred             EEEEECCCHHHHHHHH-HHHHCCC-CcceecCChhhhhhhhhhhhhh-hccCcccchh---hhhh---cChhhhhhhccc
Confidence            6899999999999999 6667798 6899999999887664 46654 3332222222   2322   224679999998


Q ss_pred             CCCH
Q 017868          263 AGLN  266 (365)
Q Consensus       263 ~g~~  266 (365)
                      +.+.
T Consensus        73 t~~d   76 (132)
T d1lssa_          73 TGKE   76 (132)
T ss_dssp             CSCH
T ss_pred             CCcH
Confidence            8865

>d1spxa_ c.2.1.2 (A:) Glucose dehydrogenase (5l265) {Nematode (Caenorhabditis elegans) [TaxId: 6239]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Tyrosine-dependent oxidoreductases
domain: Glucose dehydrogenase (5l265)
species: Nematode (Caenorhabditis elegans) [TaxId: 6239]

Probab=96.14  E-value=0.012  Score=48.52  Aligned_cols=82  Identities=22%  Similarity=0.202  Sum_probs=51.6

Q ss_pred             CCCEEEEEcC-CHHHHHHHHHHHHHCCCCeEEEEeCChhHHHHH----HHcCCC----EEEeCCC-CcccHHHHHHHHHH
Q 017868          181 PETNVLIMGA-GPIGLVTMLGAPRAFGAPRIVIVDVDDYRLSVA----KEIGAD----NIVKVST-NLQDIAEEVEKIQK  250 (365)
Q Consensus       181 ~g~~vlI~G~-g~~G~~ai~~l~~~~g~~~vi~v~~~~~~~~~~----~~~g~~----~~~~~~~-~~~~~~~~i~~~~~  250 (365)
                      +|+.+||+|+ +++|.+.++.++ ..|+ +|+.+++++++.+.+    ++.+..    ..+..+- +.++..+.+++..+
T Consensus         4 ~gKvalVTGas~GIG~aia~~la-~~Ga-~V~~~~r~~~~l~~~~~~l~~~~~~~~~~~~~~~Dvt~~~~v~~~~~~~~~   81 (264)
T d1spxa_           4 AEKVAIITGSSNGIGRATAVLFA-REGA-KVTITGRHAERLEETRQQILAAGVSEQNVNSVVADVTTDAGQDEILSTTLG   81 (264)
T ss_dssp             TTCEEEETTTTSHHHHHHHHHHH-HTTC-EEEEEESCHHHHHHHHHHHHHTTCCGGGEEEEECCTTSHHHHHHHHHHHHH
T ss_pred             CCCEEEEeCcCCHHHHHHHHHHH-HCCC-EEEEEECCHHHHHHHHHHHHhcCCCcCceEEEEccCCCHHHHHHHHHHHHH
Confidence            5788899987 999999999554 5599 688888888776532    233321    1222222 22344444444443


Q ss_pred             HhCCCceEEEeCCCC
Q 017868          251 AMGTGIDVSFDCAGL  265 (365)
Q Consensus       251 ~~~~~~d~vid~~g~  265 (365)
                      . -+++|+++.++|.
T Consensus        82 ~-~g~iDilvnnAG~   95 (264)
T d1spxa_          82 K-FGKLDILVNNAGA   95 (264)
T ss_dssp             H-HSCCCEEEECCC-
T ss_pred             H-hCCCCEeeccccc
Confidence            3 3689999998873

>d1geea_ c.2.1.2 (A:) Glucose dehydrogenase {Bacillus megaterium [TaxId: 1404]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Tyrosine-dependent oxidoreductases
domain: Glucose dehydrogenase
species: Bacillus megaterium [TaxId: 1404]

Probab=96.12  E-value=0.016  Score=47.64  Aligned_cols=82  Identities=23%  Similarity=0.275  Sum_probs=50.8

Q ss_pred             CCCEEEEEcC-CHHHHHHHHHHHHHCCCCeEEEEeCCh-hHH----HHHHHcCCCEE-EeCCC-CcccHHHHHHHHHHHh
Q 017868          181 PETNVLIMGA-GPIGLVTMLGAPRAFGAPRIVIVDVDD-YRL----SVAKEIGADNI-VKVST-NLQDIAEEVEKIQKAM  252 (365)
Q Consensus       181 ~g~~vlI~G~-g~~G~~ai~~l~~~~g~~~vi~v~~~~-~~~----~~~~~~g~~~~-~~~~~-~~~~~~~~i~~~~~~~  252 (365)
                      +|+++||+|+ +++|.++++.++ ..|+ +|+.++++. ++.    +.+++.|.... +..+- +.++..+.+++..+..
T Consensus         6 ~gK~alITGas~GIG~aia~~la-~~G~-~Vv~~~r~~~~~~~~~~~~~~~~g~~~~~~~~Dvt~~~~v~~~~~~~~~~~   83 (261)
T d1geea_           6 EGKVVVITGSSTGLGKSMAIRFA-TEKA-KVVVNYRSKEDEANSVLEEIKKVGGEAIAVKGDVTVESDVINLVQSAIKEF   83 (261)
T ss_dssp             TTCEEEETTCSSHHHHHHHHHHH-HTTC-EEEEEESSCHHHHHHHHHHHHHTTCEEEEEECCTTSHHHHHHHHHHHHHHH
T ss_pred             CCCEEEEeCCCcHHHHHHHHHHH-HCCC-EEEEEeCCcHHHHHHHHHHHHhcCCcEEEEEccCCCHHHHHHHHHHHHHHh
Confidence            5788999987 999999999555 5599 566666653 332    33455665322 22222 2234444444444433


Q ss_pred             CCCceEEEeCCCC
Q 017868          253 GTGIDVSFDCAGL  265 (365)
Q Consensus       253 ~~~~d~vid~~g~  265 (365)
                       +++|+++.++|.
T Consensus        84 -G~iDiLVnnAG~   95 (261)
T d1geea_          84 -GKLDVMINNAGL   95 (261)
T ss_dssp             -SCCCEEEECCCC
T ss_pred             -CCCCEeecccee
Confidence             589999998873

>d2c07a1 c.2.1.2 (A:54-304) beta-keto acyl carrier protein reductase {Malaria parasite (Plasmodium falciparum) [TaxId: 5833]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Tyrosine-dependent oxidoreductases
domain: beta-keto acyl carrier protein reductase
species: Malaria parasite (Plasmodium falciparum) [TaxId: 5833]

Probab=96.12  E-value=0.024  Score=46.28  Aligned_cols=81  Identities=17%  Similarity=0.201  Sum_probs=52.3

Q ss_pred             CCCEEEEEcC-CHHHHHHHHHHHHHCCCCeEEEEeCChhHHHH----HHHcCCCE-EEeCCC-CcccHHHHHHHHHHHhC
Q 017868          181 PETNVLIMGA-GPIGLVTMLGAPRAFGAPRIVIVDVDDYRLSV----AKEIGADN-IVKVST-NLQDIAEEVEKIQKAMG  253 (365)
Q Consensus       181 ~g~~vlI~G~-g~~G~~ai~~l~~~~g~~~vi~v~~~~~~~~~----~~~~g~~~-~~~~~~-~~~~~~~~i~~~~~~~~  253 (365)
                      .++.+||+|+ +++|.++++.++ ..|+ +|+.+++++++.+.    +++.|... .+..+- +.++..+.+++..+. -
T Consensus         9 enKvalITGas~GIG~a~a~~la-~~Ga-~V~~~~r~~~~l~~~~~~l~~~g~~~~~~~~Dvt~~~~v~~~~~~~~~~-~   85 (251)
T d2c07a1           9 ENKVALVTGAGRGIGREIAKMLA-KSVS-HVICISRTQKSCDSVVDEIKSFGYESSGYAGDVSKKEEISEVINKILTE-H   85 (251)
T ss_dssp             SSCEEEEESTTSHHHHHHHHHHT-TTSS-EEEEEESSHHHHHHHHHHHHTTTCCEEEEECCTTCHHHHHHHHHHHHHH-C
T ss_pred             CCCEEEEeCCCCHHHHHHHHHHH-HcCC-EEEEEECCHHHHHHHHHHHHhcCCcEEEEEccCCCHHHHHHHHHHHHHh-c
Confidence            4678899987 999999999554 6699 67888888876543    33445432 222222 233444444444433 4


Q ss_pred             CCceEEEeCCC
Q 017868          254 TGIDVSFDCAG  264 (365)
Q Consensus       254 ~~~d~vid~~g  264 (365)
                      +++|+++.+.|
T Consensus        86 g~iDilvnnag   96 (251)
T d2c07a1          86 KNVDILVNNAG   96 (251)
T ss_dssp             SCCCEEEECCC
T ss_pred             CCceeeeeccc
Confidence            68999999887

>d2avna1 c.66.1.41 (A:1-246) Hypothetical methyltransferase TM1389 {Thermotoga maritima [TaxId: 2336]}

class: Alpha and beta proteins (a/b)
fold: S-adenosyl-L-methionine-dependent methyltransferases
superfamily: S-adenosyl-L-methionine-dependent methyltransferases
family: UbiE/COQ5-like
domain: Hypothetical methyltransferase TM1389
species: Thermotoga maritima [TaxId: 2336]

Probab=96.11  E-value=0.016  Score=46.71  Aligned_cols=93  Identities=22%  Similarity=0.333  Sum_probs=66.8

Q ss_pred             CCCCCEEEEEcCCHHHHHHHHHHHHHCCCCeEEEEeCChhHHHHHHHcCCCEEEeCCCCcccHHHHHHHHHHHhCCCceE
Q 017868          179 IGPETNVLIMGAGPIGLVTMLGAPRAFGAPRIVIVDVDDYRLSVAKEIGADNIVKVSTNLQDIAEEVEKIQKAMGTGIDV  258 (365)
Q Consensus       179 ~~~g~~vlI~G~g~~G~~ai~~l~~~~g~~~vi~v~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~i~~~~~~~~~~~d~  258 (365)
                      ..++.+||=.|+|. |..+.. +++. |+ .|++++.+++..+.+++.+....+..+.  +++.        .....+|+
T Consensus        40 ~~~~~~vLDiGcG~-G~~~~~-l~~~-~~-~v~giD~s~~~l~~a~~~~~~~~~~~~~--~~l~--------~~~~~fD~  105 (246)
T d2avna1          40 LKNPCRVLDLGGGT-GKWSLF-LQER-GF-EVVLVDPSKEMLEVAREKGVKNVVEAKA--EDLP--------FPSGAFEA  105 (246)
T ss_dssp             CCSCCEEEEETCTT-CHHHHH-HHTT-TC-EEEEEESCHHHHHHHHHHTCSCEEECCT--TSCC--------SCTTCEEE
T ss_pred             cCCCCEEEEECCCC-chhccc-cccc-ce-EEEEeecccccccccccccccccccccc--cccc--------cccccccc
Confidence            46778999889874 888887 7654 88 7999999999999998877766555322  2221        11468999


Q ss_pred             EEeCCC-------CHHHHHHHHHhcccCCEEEEE
Q 017868          259 SFDCAG-------LNKTMSTALGATCAGGKVCLV  285 (365)
Q Consensus       259 vid~~g-------~~~~~~~~~~~l~~~G~~~~~  285 (365)
                      |+....       ....+..+.++|++||.++..
T Consensus       106 ii~~~~~~~~~~d~~~~l~~i~r~Lk~gG~~ii~  139 (246)
T d2avna1         106 VLALGDVLSYVENKDKAFSEIRRVLVPDGLLIAT  139 (246)
T ss_dssp             EEECSSHHHHCSCHHHHHHHHHHHEEEEEEEEEE
T ss_pred             eeeecchhhhhhhHHHHHHHHHhhcCcCcEEEEE
Confidence            986433       123566788999999998764

>d1ooea_ c.2.1.2 (A:) Dihydropteridin reductase (pteridine reductase) {Nematode (Caenorhabditis elegans) [TaxId: 6239]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Tyrosine-dependent oxidoreductases
domain: Dihydropteridin reductase (pteridine reductase)
species: Nematode (Caenorhabditis elegans) [TaxId: 6239]

Probab=96.04  E-value=0.016  Score=46.71  Aligned_cols=96  Identities=23%  Similarity=0.290  Sum_probs=56.6

Q ss_pred             CCEEEEEcC-CHHHHHHHHHHHHHCCCCeEEEEeCChhHHHHHHHcCCCEEEeCCCCcccHHHHHH----HHHH-HhCCC
Q 017868          182 ETNVLIMGA-GPIGLVTMLGAPRAFGAPRIVIVDVDDYRLSVAKEIGADNIVKVSTNLQDIAEEVE----KIQK-AMGTG  255 (365)
Q Consensus       182 g~~vlI~G~-g~~G~~ai~~l~~~~g~~~vi~v~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~i~----~~~~-~~~~~  255 (365)
                      +.+|||+|+ +++|.+.++.++ ..|+ +|+.++++++..       +......... .+..+...    .... ...++
T Consensus         2 ~gkVlITGas~GIG~aia~~l~-~~G~-~V~~~~~~~~~~-------~~~~~~~~~~-~~~~~~~~~~~~~~~~~~~~g~   71 (235)
T d1ooea_           2 SGKVIVYGGKGALGSAILEFFK-KNGY-TVLNIDLSANDQ-------ADSNILVDGN-KNWTEQEQSILEQTASSLQGSQ   71 (235)
T ss_dssp             CEEEEEETTTSHHHHHHHHHHH-HTTE-EEEEEESSCCTT-------SSEEEECCTT-SCHHHHHHHHHHHHHHHHTTCC
T ss_pred             CCEEEEECCCCHHHHHHHHHHH-HCCC-EEEEEECCchhc-------ccccceeccc-cCchhHHHHHHHHHHHHhcCCC
Confidence            457999987 999999999555 5699 577887765431       1111111111 12222211    1111 12567


Q ss_pred             ceEEEeCCCCH-----------H---------------HHHHHHHhcccCCEEEEEcc
Q 017868          256 IDVSFDCAGLN-----------K---------------TMSTALGATCAGGKVCLVGM  287 (365)
Q Consensus       256 ~d~vid~~g~~-----------~---------------~~~~~~~~l~~~G~~~~~g~  287 (365)
                      +|++|.++|..           +               .....+..|+++|+++.++.
T Consensus        72 iD~linnAG~~~~~~~~~~~~~~~~~~~~~~n~~~~~~~~~~~~~~m~~~g~Iv~isS  129 (235)
T d1ooea_          72 VDGVFCVAGGWAGGSASSKDFVKNADLMIKQSVWSSAIAAKLATTHLKPGGLLQLTGA  129 (235)
T ss_dssp             EEEEEECCCCCCCBCTTSTTHHHHHHHHHHHHHHHHHHHHHHHHHHEEEEEEEEEECC
T ss_pred             eeEEEECCcccccccccccCcHHHHhhHhhhHHHHHHHHhhhcccccccceEEEEecc
Confidence            99999988721           1               12235567788899988864

>d1pjza_ c.66.1.36 (A:) Thiopurine S-methyltransferase {Pseudomonas syringae [TaxId: 317]}

class: Alpha and beta proteins (a/b)
fold: S-adenosyl-L-methionine-dependent methyltransferases
superfamily: S-adenosyl-L-methionine-dependent methyltransferases
family: Thiopurine S-methyltransferase
domain: Thiopurine S-methyltransferase
species: Pseudomonas syringae [TaxId: 317]

Probab=96.04  E-value=0.026  Score=43.65  Aligned_cols=101  Identities=10%  Similarity=0.003  Sum_probs=65.0

Q ss_pred             HhcCCCCCCEEEEEcCCHHHHHHHHHHHHHCCCCeEEEEeCChhHHHHHHHcC-CCEE---------Ee------CCCCc
Q 017868          175 RRANIGPETNVLIMGAGPIGLVTMLGAPRAFGAPRIVIVDVDDYRLSVAKEIG-ADNI---------VK------VSTNL  238 (365)
Q Consensus       175 ~~~~~~~g~~vlI~G~g~~G~~ai~~l~~~~g~~~vi~v~~~~~~~~~~~~~g-~~~~---------~~------~~~~~  238 (365)
                      ....+.+|.+||..|+|. |..++. +++. |+ .|+++|.+++-.+.+++.- ....         ..      +..+.
T Consensus        14 ~~l~~~~~~rvLd~GCG~-G~~a~~-la~~-G~-~V~gvD~S~~~i~~a~~~~~~~~~~~~~~~~~~~~~~~~~~~~~d~   89 (201)
T d1pjza_          14 SSLNVVPGARVLVPLCGK-SQDMSW-LSGQ-GY-HVVGAELSEAAVERYFTERGEQPHITSQGDFKVYAAPGIEIWCGDF   89 (201)
T ss_dssp             HHHCCCTTCEEEETTTCC-SHHHHH-HHHH-CC-EEEEEEECHHHHHHHHHHHCSCSEEEEETTEEEEECSSSEEEEECC
T ss_pred             HHcCCCCCCEEEEecCcC-CHHHHH-HHHc-CC-ceEeecccHHHHHHHHHHhccccchhhhhhhhhccccccceecccc
Confidence            335689999999999865 777777 7765 98 7999999999888886632 1100         00      00011


Q ss_pred             ccHHHHHHHHHHHhCCCceEEEeCCC--------CHHHHHHHHHhcccCCEEEEEc
Q 017868          239 QDIAEEVEKIQKAMGTGIDVSFDCAG--------LNKTMSTALGATCAGGKVCLVG  286 (365)
Q Consensus       239 ~~~~~~i~~~~~~~~~~~d~vid~~g--------~~~~~~~~~~~l~~~G~~~~~g  286 (365)
                      .++...       ....+|.|++...        ....+..+.++|+++|.+++..
T Consensus        90 ~~l~~~-------~~~~~D~i~~~~~l~~l~~~~~~~~~~~i~~~LkpgG~l~l~~  138 (201)
T d1pjza_          90 FALTAR-------DIGHCAAFYDRAAMIALPADMRERYVQHLEALMPQACSGLLIT  138 (201)
T ss_dssp             SSSTHH-------HHHSEEEEEEESCGGGSCHHHHHHHHHHHHHHSCSEEEEEEEE
T ss_pred             cccccc-------cccceeEEEEEeeeEecchhhhHHHHHHHHHhcCCCcEEEEEE
Confidence            111111       1247899988433        1235667888999999977653

>d2nxca1 c.66.1.39 (A:1-254) PrmA-like protein TTHA0656 (TT0836) {Thermus thermophilus [TaxId: 274]}

class: Alpha and beta proteins (a/b)
fold: S-adenosyl-L-methionine-dependent methyltransferases
superfamily: S-adenosyl-L-methionine-dependent methyltransferases
family: Ribosomal protein L11 methyltransferase PrmA
domain: PrmA-like protein TTHA0656 (TT0836)
species: Thermus thermophilus [TaxId: 274]

Probab=96.01  E-value=0.041  Score=44.82  Aligned_cols=95  Identities=21%  Similarity=0.285  Sum_probs=61.7

Q ss_pred             CCCCCEEEEEcCCHHHHHHHHHHHHHCCCCeEEEEeCChhHHHHHH----HcCCCEEEeCCCCcccHHHHHHHHHHHhCC
Q 017868          179 IGPETNVLIMGAGPIGLVTMLGAPRAFGAPRIVIVDVDDYRLSVAK----EIGADNIVKVSTNLQDIAEEVEKIQKAMGT  254 (365)
Q Consensus       179 ~~~g~~vlI~G~g~~G~~ai~~l~~~~g~~~vi~v~~~~~~~~~~~----~~g~~~~~~~~~~~~~~~~~i~~~~~~~~~  254 (365)
                      .++|++||=.|+|. |..++. +++ .|+ +|++++.+++..+.++    ..+....+..    .+..+    .  ....
T Consensus       118 ~~~g~~VLDiGcGs-G~l~i~-aa~-~g~-~V~gvDis~~av~~A~~na~~n~~~~~~~~----~d~~~----~--~~~~  183 (254)
T d2nxca1         118 LRPGDKVLDLGTGS-GVLAIA-AEK-LGG-KALGVDIDPMVLPQAEANAKRNGVRPRFLE----GSLEA----A--LPFG  183 (254)
T ss_dssp             CCTTCEEEEETCTT-SHHHHH-HHH-TTC-EEEEEESCGGGHHHHHHHHHHTTCCCEEEE----SCHHH----H--GGGC
T ss_pred             cCccCEEEEcccch-hHHHHH-HHh-cCC-EEEEEECChHHHHHHHHHHHHcCCceeEEe----ccccc----c--cccc
Confidence            58999999999864 666655 544 587 6899999998766554    3454332221    12221    1  1246


Q ss_pred             CceEEEeCCCCH---HHHHHHHHhcccCCEEEEEcc
Q 017868          255 GIDVSFDCAGLN---KTMSTALGATCAGGKVCLVGM  287 (365)
Q Consensus       255 ~~d~vid~~g~~---~~~~~~~~~l~~~G~~~~~g~  287 (365)
                      .+|+|+......   ..+....++|+|+|++++.|.
T Consensus       184 ~fD~V~ani~~~~l~~l~~~~~~~LkpGG~lilSgi  219 (254)
T d2nxca1         184 PFDLLVANLYAELHAALAPRYREALVPGGRALLTGI  219 (254)
T ss_dssp             CEEEEEEECCHHHHHHHHHHHHHHEEEEEEEEEEEE
T ss_pred             ccchhhhccccccHHHHHHHHHHhcCCCcEEEEEec
Confidence            899999765432   234567789999999987653

>d2f1ka2 c.2.1.6 (A:1-165) Prephenate dehydrogenase TyrA {Synechocystis sp. pcc 6803 [TaxId: 1148]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: 6-phosphogluconate dehydrogenase-like, N-terminal domain
domain: Prephenate dehydrogenase TyrA
species: Synechocystis sp. pcc 6803 [TaxId: 1148]

Probab=96.01  E-value=0.042  Score=41.41  Aligned_cols=85  Identities=16%  Similarity=0.109  Sum_probs=56.5

Q ss_pred             EEEEEcCCHHHHHHHHHHHHHCCCCeEEEEeCChhHHHHHHHcCCC-EEEeCCCCcccHHHHHHHHHHHhCCCceEEEeC
Q 017868          184 NVLIMGAGPIGLVTMLGAPRAFGAPRIVIVDVDDYRLSVAKEIGAD-NIVKVSTNLQDIAEEVEKIQKAMGTGIDVSFDC  262 (365)
Q Consensus       184 ~vlI~G~g~~G~~ai~~l~~~~g~~~vi~v~~~~~~~~~~~~~g~~-~~~~~~~~~~~~~~~i~~~~~~~~~~~d~vid~  262 (365)
                      +|.|.|+|.+|...+. .++..|. .|.+.++++++.+.+++.+.. ...+   +. +   .        -...|+||-|
T Consensus         2 kI~iIG~G~mG~~lA~-~l~~~g~-~V~~~d~~~~~~~~a~~~~~~~~~~~---~~-~---~--------~~~~DiIila   64 (165)
T d2f1ka2           2 KIGVVGLGLIGASLAG-DLRRRGH-YLIGVSRQQSTCEKAVERQLVDEAGQ---DL-S---L--------LQTAKIIFLC   64 (165)
T ss_dssp             EEEEECCSHHHHHHHH-HHHHTTC-EEEEECSCHHHHHHHHHTTSCSEEES---CG-G---G--------GTTCSEEEEC
T ss_pred             EEEEEeecHHHHHHHH-HHHHCCC-EEEEEECCchHHHHHHHhhccceeee---ec-c---c--------cccccccccc
Confidence            6889999999998888 5567798 688889999999998888853 3221   11 1   1        1468999988


Q ss_pred             CCCHHHHH----HHHHhcccCCEEEEEc
Q 017868          263 AGLNKTMS----TALGATCAGGKVCLVG  286 (365)
Q Consensus       263 ~g~~~~~~----~~~~~l~~~G~~~~~g  286 (365)
                      +-.. ...    .....+.++..++..+
T Consensus        65 vp~~-~~~~vl~~l~~~l~~~~iv~~~~   91 (165)
T d2f1ka2          65 TPIQ-LILPTLEKLIPHLSPTAIVTDVA   91 (165)
T ss_dssp             SCHH-HHHHHHHHHGGGSCTTCEEEECC
T ss_pred             CcHh-hhhhhhhhhhhhcccccceeecc
Confidence            7633 333    3333445455554443

>d1vl5a_ c.66.1.41 (A:) Hypothetical protein BH2331 {Bacillus halodurans [TaxId: 86665]}

class: Alpha and beta proteins (a/b)
fold: S-adenosyl-L-methionine-dependent methyltransferases
superfamily: S-adenosyl-L-methionine-dependent methyltransferases
family: UbiE/COQ5-like
domain: Hypothetical protein BH2331
species: Bacillus halodurans [TaxId: 86665]

Probab=96.01  E-value=0.012  Score=47.12  Aligned_cols=101  Identities=19%  Similarity=0.178  Sum_probs=67.1

Q ss_pred             HHhcCCCCCCEEEEEcCCHHHHHHHHHHHHHCCCCeEEEEeCChhHHHHHH----HcCCCEEEeCCCCcccHHHHHHHHH
Q 017868          174 CRRANIGPETNVLIMGAGPIGLVTMLGAPRAFGAPRIVIVDVDDYRLSVAK----EIGADNIVKVSTNLQDIAEEVEKIQ  249 (365)
Q Consensus       174 ~~~~~~~~g~~vlI~G~g~~G~~ai~~l~~~~g~~~vi~v~~~~~~~~~~~----~~g~~~~~~~~~~~~~~~~~i~~~~  249 (365)
                      ++.++++++++||=.|+| .|..+.. +++. |. .+++++.+++-.+.++    +.+.+.+-....+.+++.       
T Consensus         8 l~~~~l~~~~rVLDiGcG-~G~~~~~-l~~~-~~-~v~gvD~s~~~i~~A~~~~~~~~~~~i~~~~~d~~~l~-------   76 (231)
T d1vl5a_           8 MQIAALKGNEEVLDVATG-GGHVANA-FAPF-VK-KVVAFDLTEDILKVARAFIEGNGHQQVEYVQGDAEQMP-------   76 (231)
T ss_dssp             HHHHTCCSCCEEEEETCT-TCHHHHH-HGGG-SS-EEEEEESCHHHHHHHHHHHHHTTCCSEEEEECCC-CCC-------
T ss_pred             HHhcCCCCcCEEEEeccc-CcHHHHH-HHHh-CC-EEEEEECCHHHHhhhhhccccccccccccccccccccc-------
Confidence            467889999999999986 3777777 6655 66 6899999987666543    345443221112222220       


Q ss_pred             HHhCCCceEEEeCCC-----C-HHHHHHHHHhcccCCEEEEEc
Q 017868          250 KAMGTGIDVSFDCAG-----L-NKTMSTALGATCAGGKVCLVG  286 (365)
Q Consensus       250 ~~~~~~~d~vid~~g-----~-~~~~~~~~~~l~~~G~~~~~g  286 (365)
                       ...+.+|+|+..-.     . ...+..+.++|+|+|.+++..
T Consensus        77 -~~~~~fD~v~~~~~l~~~~d~~~~l~~~~r~LkpgG~l~i~~  118 (231)
T d1vl5a_          77 -FTDERFHIVTCRIAAHHFPNPASFVSEAYRVLKKGGQLLLVD  118 (231)
T ss_dssp             -SCTTCEEEEEEESCGGGCSCHHHHHHHHHHHEEEEEEEEEEE
T ss_pred             -ccccccccccccccccccCCHHHHHHHHHHhcCCCcEEEEEe
Confidence             01467999986422     2 346778999999999998764

>d1vi2a1 c.2.1.7 (A:107-288) Putative shikimate dehydrogenase YdiB {Escherichia coli [TaxId: 562]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Aminoacid dehydrogenase-like, C-terminal domain
domain: Putative shikimate dehydrogenase YdiB
species: Escherichia coli [TaxId: 562]

Probab=95.99  E-value=0.015  Score=44.97  Aligned_cols=123  Identities=13%  Similarity=0.111  Sum_probs=67.4

Q ss_pred             HHHhcCC-CCCCEEEEEcCCHHHHHHHHHHHHHCCCCeEEEEeCChhHHH----HHHHcC----CC-EEEeCCCCcccHH
Q 017868          173 ACRRANI-GPETNVLIMGAGPIGLVTMLGAPRAFGAPRIVIVDVDDYRLS----VAKEIG----AD-NIVKVSTNLQDIA  242 (365)
Q Consensus       173 ~~~~~~~-~~g~~vlI~G~g~~G~~ai~~l~~~~g~~~vi~v~~~~~~~~----~~~~~g----~~-~~~~~~~~~~~~~  242 (365)
                      +++..++ -++.+|||.|+|+.+.+++. .+...|++.+..+.+++++.+    ++++++    .. ....+    .+..
T Consensus         8 ~l~~~~~~l~~k~vlIlGaGGaarai~~-al~~~g~~~i~i~nR~~~~~~~~~~l~~~~~~~~~~~~~~~~~----~~~~   82 (182)
T d1vi2a1           8 AIKESGFDIKGKTMVLLGAGGASTAIGA-QGAIEGLKEIKLFNRRDEFFDKALAFAQRVNENTDCVVTVTDL----ADQQ   82 (182)
T ss_dssp             HHHHTTCCCTTCEEEEECCSHHHHHHHH-HHHHTTCSEEEEEECSSTTHHHHHHHHHHHHHHSSCEEEEEET----TCHH
T ss_pred             HHHHcCCCcCCCEEEEECCcHHHHHHHH-HHhhcCCceEeeeccchHHHHHHHHHHHHHHhhcCcceEeeec----cccc
Confidence            3444333 36789999999999999988 666679988988888765543    233332    21 11221    1222


Q ss_pred             HHHHHHHHHhCCCceEEEeCCCCHHH------HHHHHHhcccCCEEEEEccCCCCccccchHhhhcCcEE
Q 017868          243 EEVEKIQKAMGTGIDVSFDCAGLNKT------MSTALGATCAGGKVCLVGMGHHEMTVPLTPAAVREVDV  306 (365)
Q Consensus       243 ~~i~~~~~~~~~~~d~vid~~g~~~~------~~~~~~~l~~~G~~~~~g~~~~~~~~~~~~~~~~~~~i  306 (365)
                      . +.+.    -..+|++|+|+.....      +..-...+.++..++.+-..... +......-.++.+.
T Consensus        83 ~-~~~~----~~~~diiIN~Tp~G~~~~~~~~~~~~~~~~~~~~~v~Di~Y~p~~-T~ll~~a~~~g~~~  146 (182)
T d1vi2a1          83 A-FAEA----LASADILTNGTKVGMKPLENESLVNDISLLHPGLLVTECVYNPHM-TKLLQQAQQAGCKT  146 (182)
T ss_dssp             H-HHHH----HHTCSEEEECSSTTSTTSCSCCSCCCGGGSCTTCEEEECCCSSSS-CHHHHHHHTTTCEE
T ss_pred             c-hhhh----hcccceeccccCCccccccchhhhhHHHhhhcchhhHHhhcCccc-cHHHHHHHHCcCeE
Confidence            2 2221    1468999999763210      00113456666666666433222 33334444444443

>d1hdoa_ c.2.1.2 (A:) Biliverdin IX beta reductase {Human (Homo sapiens) [TaxId: 9606]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Tyrosine-dependent oxidoreductases
domain: Biliverdin IX beta reductase
species: Human (Homo sapiens) [TaxId: 9606]

Probab=95.97  E-value=0.0053  Score=48.59  Aligned_cols=74  Identities=27%  Similarity=0.334  Sum_probs=47.4

Q ss_pred             CCEEEEEcC-CHHHHHHHHHHHHHCCCCeEEEEeCChhHHHHHHHcCCCEEEeCCCCcccHHHHHHHHHHHhCCCceEEE
Q 017868          182 ETNVLIMGA-GPIGLVTMLGAPRAFGAPRIVIVDVDDYRLSVAKEIGADNIVKVSTNLQDIAEEVEKIQKAMGTGIDVSF  260 (365)
Q Consensus       182 g~~vlI~G~-g~~G~~ai~~l~~~~g~~~vi~v~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~i~~~~~~~~~~~d~vi  260 (365)
                      .++|+|+|+ |.+|..++..+ ...|. .|.++.+++++.......++. ++..+  ..+.. .+.+..    .+.|+||
T Consensus         3 ~kkIlV~GatG~iG~~v~~~L-l~~g~-~V~~~~R~~~~~~~~~~~~~~-~~~gD--~~d~~-~l~~al----~~~d~vi   72 (205)
T d1hdoa_           3 VKKIAIFGATGQTGLTTLAQA-VQAGY-EVTVLVRDSSRLPSEGPRPAH-VVVGD--VLQAA-DVDKTV----AGQDAVI   72 (205)
T ss_dssp             CCEEEEESTTSHHHHHHHHHH-HHTTC-EEEEEESCGGGSCSSSCCCSE-EEESC--TTSHH-HHHHHH----TTCSEEE
T ss_pred             CCEEEEECCCCHHHHHHHHHH-HHCcC-EEEEEEcChhhcccccccccc-ccccc--ccchh-hHHHHh----cCCCEEE
Confidence            468999997 99999999844 45688 577777888775433333443 33322  23332 233322    4689999


Q ss_pred             eCCCC
Q 017868          261 DCAGL  265 (365)
Q Consensus       261 d~~g~  265 (365)
                      .++|.
T Consensus        73 ~~~g~   77 (205)
T d1hdoa_          73 VLLGT   77 (205)
T ss_dssp             ECCCC
T ss_pred             EEecc
Confidence            99874

>d1uzma1 c.2.1.2 (A:9-245) beta-keto acyl carrier protein reductase {Mycobacterium tuberculosis [TaxId: 1773]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Tyrosine-dependent oxidoreductases
domain: beta-keto acyl carrier protein reductase
species: Mycobacterium tuberculosis [TaxId: 1773]

Probab=95.96  E-value=0.0017  Score=52.90  Aligned_cols=75  Identities=19%  Similarity=0.211  Sum_probs=48.6

Q ss_pred             CCCEEEEEcC-CHHHHHHHHHHHHHCCCCeEEEEeCChhHHHHHHHcCCCEEEeCC-CCcccHHHHHHHHHHHhCCCceE
Q 017868          181 PETNVLIMGA-GPIGLVTMLGAPRAFGAPRIVIVDVDDYRLSVAKEIGADNIVKVS-TNLQDIAEEVEKIQKAMGTGIDV  258 (365)
Q Consensus       181 ~g~~vlI~G~-g~~G~~ai~~l~~~~g~~~vi~v~~~~~~~~~~~~~g~~~~~~~~-~~~~~~~~~i~~~~~~~~~~~d~  258 (365)
                      .|+++||+|+ +++|.++++.++ ..|+ +|+.+++++++.+.+      ..+..+ .+.++..+.+++..+.. +++|+
T Consensus         6 ~gK~~lITGas~GIG~aia~~la-~~Ga-~V~~~~r~~~~~~~~------~~~~~Dv~~~~~v~~~~~~~~~~~-g~iDi   76 (237)
T d1uzma1           6 VSRSVLVTGGNRGIGLAIAQRLA-ADGH-KVAVTHRGSGAPKGL------FGVEVDVTDSDAVDRAFTAVEEHQ-GPVEV   76 (237)
T ss_dssp             CCCEEEETTTTSHHHHHHHHHHH-HTTC-EEEEEESSSCCCTTS------EEEECCTTCHHHHHHHHHHHHHHH-SSCSE
T ss_pred             CCCEEEEeCCCCHHHHHHHHHHH-HCCC-EEEEEECCcchhcCc------eEEEEecCCHHHHHHHHHHHHHhc-CCceE
Confidence            6789999987 899999999554 5699 577777776543321      112222 22334444445544433 58999


Q ss_pred             EEeCCC
Q 017868          259 SFDCAG  264 (365)
Q Consensus       259 vid~~g  264 (365)
                      ++.++|
T Consensus        77 LVnnAG   82 (237)
T d1uzma1          77 LVSNAG   82 (237)
T ss_dssp             EEEECS
T ss_pred             EEeeec
Confidence            999887

>d2fr1a1 c.2.1.2 (A:1657-1915) Erythromycin synthase, eryAI, 1st ketoreductase module {Saccharopolyspora erythraea [TaxId: 1836]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Tyrosine-dependent oxidoreductases
domain: Erythromycin synthase, eryAI, 1st ketoreductase module
species: Saccharopolyspora erythraea [TaxId: 1836]

Probab=95.91  E-value=0.04  Score=44.96  Aligned_cols=83  Identities=22%  Similarity=0.358  Sum_probs=50.8

Q ss_pred             CCCCCCEEEEEcC-CHHHHHHHHHHHHHCCCCeEEEEeCChh----H---HHHHHHcCCCEE-EeCCCCcccHHHHHHHH
Q 017868          178 NIGPETNVLIMGA-GPIGLVTMLGAPRAFGAPRIVIVDVDDY----R---LSVAKEIGADNI-VKVSTNLQDIAEEVEKI  248 (365)
Q Consensus       178 ~~~~g~~vlI~G~-g~~G~~ai~~l~~~~g~~~vi~v~~~~~----~---~~~~~~~g~~~~-~~~~~~~~~~~~~i~~~  248 (365)
                      .++|+.++||+|+ +++|.+++..+++. |+++++.+.+++.    .   .+.+++.|.... +..+-.  +. +.++++
T Consensus         5 ~~~p~gt~lVTGgs~GIG~a~a~~la~~-Ga~~vvl~~R~~~~~~~~~~~~~~l~~~g~~v~~~~~Dv~--d~-~~~~~~   80 (259)
T d2fr1a1           5 EWKPTGTVLVTGGTGGVGGQIARWLARR-GAPHLLLVSRSGPDADGAGELVAELEALGARTTVAACDVT--DR-ESVREL   80 (259)
T ss_dssp             CCCCCSEEEEETTTSHHHHHHHHHHHHH-TCSEEEEEESSGGGSTTHHHHHHHHHHTTCEEEEEECCTT--CH-HHHHHH
T ss_pred             ccCCcCEEEEECCCcHHHHHHHHHHHHC-CCCEEEEEeCCccCHHHHHHHHHHHHhccccccccccccc--hH-HHHHHh
Confidence            4688999999987 99999999966655 8877777766532    1   223345565332 222222  22 223333


Q ss_pred             HHHh--CCCceEEEeCCC
Q 017868          249 QKAM--GTGIDVSFDCAG  264 (365)
Q Consensus       249 ~~~~--~~~~d~vid~~g  264 (365)
                      .+..  ..++|.++.+.|
T Consensus        81 ~~~i~~~~~i~~vv~~ag   98 (259)
T d2fr1a1          81 LGGIGDDVPLSAVFHAAA   98 (259)
T ss_dssp             HHTSCTTSCEEEEEECCC
T ss_pred             hccccccccccccccccc
Confidence            3221  346899999887

>d1gega_ c.2.1.2 (A:) meso-2,3-butanediol dehydrogenase {Klebsiella pneumoniae [TaxId: 573]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Tyrosine-dependent oxidoreductases
domain: meso-2,3-butanediol dehydrogenase
species: Klebsiella pneumoniae [TaxId: 573]

Probab=95.90  E-value=0.04  Score=44.95  Aligned_cols=78  Identities=28%  Similarity=0.371  Sum_probs=49.8

Q ss_pred             EEEEEcC-CHHHHHHHHHHHHHCCCCeEEEEeCChhHHHH----HHHcCCCEE-EeCCC-CcccHHHHHHHHHHHhCCCc
Q 017868          184 NVLIMGA-GPIGLVTMLGAPRAFGAPRIVIVDVDDYRLSV----AKEIGADNI-VKVST-NLQDIAEEVEKIQKAMGTGI  256 (365)
Q Consensus       184 ~vlI~G~-g~~G~~ai~~l~~~~g~~~vi~v~~~~~~~~~----~~~~g~~~~-~~~~~-~~~~~~~~i~~~~~~~~~~~  256 (365)
                      .+||+|+ +++|.++++.++ ..|+ +|+.+++++++.+.    +++.|.... +..+- +.++..+.+.+..+. -+++
T Consensus         3 ValITGas~GIG~aia~~la-~~Ga-~V~~~~r~~~~l~~~~~~i~~~g~~~~~~~~Dv~~~~~v~~~~~~~~~~-~g~i   79 (255)
T d1gega_           3 VALVTGAGQGIGKAIALRLV-KDGF-AVAIADYNDATAKAVASEINQAGGHAVAVKVDVSDRDQVFAAVEQARKT-LGGF   79 (255)
T ss_dssp             EEEEETTTSHHHHHHHHHHH-HTTC-EEEEEESCHHHHHHHHHHHHHTTCCEEEEECCTTSHHHHHHHHHHHHHH-TTCC
T ss_pred             EEEEcCCccHHHHHHHHHHH-HCCC-EEEEEECCHHHHHHHHHHHHhcCCcEEEEEeeCCCHHHHHHHHHHHHHH-hCCc
Confidence            4588987 999999999555 5599 67888888877543    344454322 22222 233444444444443 3589


Q ss_pred             eEEEeCCC
Q 017868          257 DVSFDCAG  264 (365)
Q Consensus       257 d~vid~~g  264 (365)
                      |+++.++|
T Consensus        80 DilVnnAG   87 (255)
T d1gega_          80 DVIVNNAG   87 (255)
T ss_dssp             CEEEECCC
T ss_pred             cEEEeccc
Confidence            99999887

>d1nw3a_ c.66.1.31 (A:) Catalytic, N-terminal domain of histone methyltransferase Dot1l {Human (Homo sapiens) [TaxId: 9606]}

class: Alpha and beta proteins (a/b)
fold: S-adenosyl-L-methionine-dependent methyltransferases
superfamily: S-adenosyl-L-methionine-dependent methyltransferases
family: Catalytic, N-terminal domain of histone methyltransferase Dot1l
domain: Catalytic, N-terminal domain of histone methyltransferase Dot1l
species: Human (Homo sapiens) [TaxId: 9606]

Probab=95.86  E-value=0.087  Score=44.60  Aligned_cols=105  Identities=13%  Similarity=0.131  Sum_probs=66.9

Q ss_pred             HHHHhcCCCCCCEEEEEcCCHHHHHHHHHHHHHCCCCeEEEEeCChhHHHHHHH-----------cCC----CEEEeCCC
Q 017868          172 HACRRANIGPETNVLIMGAGPIGLVTMLGAPRAFGAPRIVIVDVDDYRLSVAKE-----------IGA----DNIVKVST  236 (365)
Q Consensus       172 ~~~~~~~~~~g~~vlI~G~g~~G~~ai~~l~~~~g~~~vi~v~~~~~~~~~~~~-----------~g~----~~~~~~~~  236 (365)
                      ..++..+++++++||=.|+|. |..+.+ +++..++..+++++.+++..+.+++           +|.    ...+.-+-
T Consensus       142 ~~~~~~~l~~~~~vlD~GcG~-G~~~~~-~a~~~~~~~~~Gid~s~~~~~~a~~~~~~~~~~~~~~g~~~~~i~~~~gd~  219 (328)
T d1nw3a_         142 QMIDEIKMTDDDLFVDLGSGV-GQVVLQ-VAAATNCKHHYGVEKADIPAKYAETMDREFRKWMKWYGKKHAEYTLERGDF  219 (328)
T ss_dssp             HHHHHSCCCTTCEEEEETCTT-SHHHHH-HHHHCCCSEEEEEECSHHHHHHHHHHHHHHHHHHHHHTCCCCCEEEEECCT
T ss_pred             HHHHHcCCCCCCEEEEcCCCC-CHHHHH-HHHHhCCCeEEEEeCCHHHHHHHHHHHHHHHHHhhhccccCCceEEEECcc
Confidence            445778999999999899864 888888 8888898889999999877665433           121    11222111


Q ss_pred             CcccHHHHHHHHHHHhCCCceEEEeCC--CCH---HHHHHHHHhcccCCEEEEEc
Q 017868          237 NLQDIAEEVEKIQKAMGTGIDVSFDCA--GLN---KTMSTALGATCAGGKVCLVG  286 (365)
Q Consensus       237 ~~~~~~~~i~~~~~~~~~~~d~vid~~--g~~---~~~~~~~~~l~~~G~~~~~g  286 (365)
                      .+.++.+.+        ..+|+|+-..  -.+   ..+...++.|++||+++..-
T Consensus       220 ~~~~~~~~~--------~~advi~~~~~~f~~~~~~~l~e~~r~LKpGg~iv~~~  266 (328)
T d1nw3a_         220 LSEEWRERI--------ANTSVIFVNNFAFGPEVDHQLKERFANMKEGGRIVSSK  266 (328)
T ss_dssp             TSHHHHHHH--------HHCSEEEECCTTTCHHHHHHHHHHHTTCCTTCEEEESS
T ss_pred             ccccccccc--------CcceEEEEcceecchHHHHHHHHHHHhCCCCcEEEEec
Confidence            112222211        1367777421  122   24456788899999998753

>d1edoa_ c.2.1.2 (A:) beta-keto acyl carrier protein reductase {Oil seed rape (Brassica napus) [TaxId: 3708]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Tyrosine-dependent oxidoreductases
domain: beta-keto acyl carrier protein reductase
species: Oil seed rape (Brassica napus) [TaxId: 3708]

Probab=95.84  E-value=0.045  Score=44.32  Aligned_cols=79  Identities=20%  Similarity=0.178  Sum_probs=47.4

Q ss_pred             EEEEEcC-CHHHHHHHHHHHHHCCCCeEEEEeCChhHHH----HHHHcCCCE-EEeCCC-CcccHHHHHHHHHHHhCCCc
Q 017868          184 NVLIMGA-GPIGLVTMLGAPRAFGAPRIVIVDVDDYRLS----VAKEIGADN-IVKVST-NLQDIAEEVEKIQKAMGTGI  256 (365)
Q Consensus       184 ~vlI~G~-g~~G~~ai~~l~~~~g~~~vi~v~~~~~~~~----~~~~~g~~~-~~~~~~-~~~~~~~~i~~~~~~~~~~~  256 (365)
                      .+||+|+ +++|.++++.++ ..|+++++...+++++.+    .+++.|... .+..+- +.++..+.+++..+. -+++
T Consensus         3 V~lITGas~GIG~a~a~~la-~~Ga~V~i~~~~~~~~~~~~~~~~~~~g~~~~~~~~Dv~~~~~v~~~~~~~~~~-~g~i   80 (244)
T d1edoa_           3 VVVVTGASRGIGKAIALSLG-KAGCKVLVNYARSAKAAEEVSKQIEAYGGQAITFGGDVSKEADVEAMMKTAIDA-WGTI   80 (244)
T ss_dssp             EEEETTCSSHHHHHHHHHHH-HTTCEEEEEESSCHHHHHHHHHHHHHHTCEEEEEECCTTSHHHHHHHHHHHHHH-SSCC
T ss_pred             EEEEeCCCcHHHHHHHHHHH-HCCCEEEEEeCCCHHHHHHHHHHHHHcCCcEEEEeCCCCCHHHHHHHHHHHHHH-cCCC
Confidence            5688887 999999999555 569954444455655543    334455432 222222 223444444444443 4689


Q ss_pred             eEEEeCCC
Q 017868          257 DVSFDCAG  264 (365)
Q Consensus       257 d~vid~~g  264 (365)
                      |++++++|
T Consensus        81 DiLVnnAg   88 (244)
T d1edoa_          81 DVVVNNAG   88 (244)
T ss_dssp             SEEEECCC
T ss_pred             Cccccccc
Confidence            99999887

>d1bg6a2 c.2.1.6 (A:4-187) N-(1-D-carboxylethyl)-L-norvaline dehydrogenase {Arthrobacter, strain 1c [TaxId: 1663]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: 6-phosphogluconate dehydrogenase-like, N-terminal domain
domain: N-(1-D-carboxylethyl)-L-norvaline dehydrogenase
species: Arthrobacter, strain 1c [TaxId: 1663]

Probab=95.78  E-value=0.045  Score=41.87  Aligned_cols=91  Identities=16%  Similarity=0.115  Sum_probs=57.3

Q ss_pred             CEEEEEcCCHHHHHHHHHHHHHCCCCeEEEEeCChhHHHHHHHcCCCEEE--------eCCCCcccHHHHHHHHHHHhCC
Q 017868          183 TNVLIMGAGPIGLVTMLGAPRAFGAPRIVIVDVDDYRLSVAKEIGADNIV--------KVSTNLQDIAEEVEKIQKAMGT  254 (365)
Q Consensus       183 ~~vlI~G~g~~G~~ai~~l~~~~g~~~vi~v~~~~~~~~~~~~~g~~~~~--------~~~~~~~~~~~~i~~~~~~~~~  254 (365)
                      .++.|.|+|.+|++.+. .+...|. .|...++++++.+.+++.+.....        .......+..+.+        .
T Consensus         2 k~iaIiGaG~~G~~~A~-~l~~~G~-~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~e~~--------~   71 (184)
T d1bg6a2           2 KTYAVLGLGNGGHAFAA-YLALKGQ-SVLAWDIDAQRIKEIQDRGAIIAEGPGLAGTAHPDLLTSDIGLAV--------K   71 (184)
T ss_dssp             CEEEEECCSHHHHHHHH-HHHHTTC-EEEEECSCHHHHHHHHHHTSEEEESSSCCEEECCSEEESCHHHHH--------T
T ss_pred             CEEEEECccHHHHHHHH-HHHHCCC-EEEEEECCHHHHHHHHHcCCCchhhhhhhhhhhhhhhhhhhHhHh--------c
Confidence            68999999999999999 5455698 688888999998888776532211        0000012222221        4


Q ss_pred             CceEEEeCCCCHH---HHHHHHHhcccCCEEE
Q 017868          255 GIDVSFDCAGLNK---TMSTALGATCAGGKVC  283 (365)
Q Consensus       255 ~~d~vid~~g~~~---~~~~~~~~l~~~G~~~  283 (365)
                      .+|++|-++....   .+.+....+.++-.++
T Consensus        72 ~aD~iii~v~~~~~~~~~~~i~~~l~~~~~iv  103 (184)
T d1bg6a2          72 DADVILIVVPAIHHASIAANIASYISEGQLII  103 (184)
T ss_dssp             TCSEEEECSCGGGHHHHHHHHGGGCCTTCEEE
T ss_pred             CCCEEEEEEchhHHHHHHHHhhhccCCCCEEE
Confidence            7999999887542   2333444555555444

>d1gz6a_ c.2.1.2 (A:) (3R)-hydroxyacyl-CoA dehydrogenase domain of estradiol 17 beta-Dehydrogenase 4 {Rat (Rattus norvegicus) [TaxId: 10116]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Tyrosine-dependent oxidoreductases
domain: (3R)-hydroxyacyl-CoA dehydrogenase domain of estradiol 17 beta-Dehydrogenase 4
species: Rat (Rattus norvegicus) [TaxId: 10116]

Probab=95.71  E-value=0.044  Score=45.92  Aligned_cols=80  Identities=24%  Similarity=0.297  Sum_probs=50.7

Q ss_pred             CCCEEEEEcC-CHHHHHHHHHHHHHCCCCeEEEEeCC---------hhHHH-H---HHHcCCCEEEeCCCCcccHHHHHH
Q 017868          181 PETNVLIMGA-GPIGLVTMLGAPRAFGAPRIVIVDVD---------DYRLS-V---AKEIGADNIVKVSTNLQDIAEEVE  246 (365)
Q Consensus       181 ~g~~vlI~G~-g~~G~~ai~~l~~~~g~~~vi~v~~~---------~~~~~-~---~~~~g~~~~~~~~~~~~~~~~~i~  246 (365)
                      +|+++||+|+ +++|.+.++.++ ..|+ +|+..+.+         .+..+ .   ....+.....+.. +..+..+.++
T Consensus         6 ~gKvalITGas~GIG~aiA~~la-~~Ga-~Vvi~d~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~d~~-~~~~~~~~v~   82 (302)
T d1gz6a_           6 DGRVVLVTGAGGGLGRAYALAFA-ERGA-LVVVNDLGGDFKGVGKGSSAADKVVEEIRRRGGKAVANYD-SVEAGEKLVK   82 (302)
T ss_dssp             TTCEEEETTTTSHHHHHHHHHHH-HTTC-EEEEECCCBCTTSCBCCSHHHHHHHHHHHHTTCEEEEECC-CGGGHHHHHH
T ss_pred             CCCEEEEeCCCCHHHHHHHHHHH-HcCC-EEEEEeCCchhhhhhhhHHHHHHHHHHHhhcccccccccc-hHHHHHHHHH
Confidence            5788999987 999999999554 6699 56666433         22222 2   2333444444433 3345555566


Q ss_pred             HHHHHhCCCceEEEeCCC
Q 017868          247 KIQKAMGTGIDVSFDCAG  264 (365)
Q Consensus       247 ~~~~~~~~~~d~vid~~g  264 (365)
                      +..+. -+++|++|+++|
T Consensus        83 ~~~~~-~G~iDiLVnNAG   99 (302)
T d1gz6a_          83 TALDT-FGRIDVVVNNAG   99 (302)
T ss_dssp             HHHHH-TSCCCEEEECCC
T ss_pred             HHHHH-cCCCCEEEECCc
Confidence            55443 468999999988

>d1snya_ c.2.1.2 (A:) Carbonyl reductase sniffer {Fruit fly (Drosophila melanogaster) [TaxId: 7227]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Tyrosine-dependent oxidoreductases
domain: Carbonyl reductase sniffer
species: Fruit fly (Drosophila melanogaster) [TaxId: 7227]

Probab=95.70  E-value=0.018  Score=46.92  Aligned_cols=81  Identities=17%  Similarity=0.246  Sum_probs=48.7

Q ss_pred             CEEEEEcC-CHHHHHHHHHHHH--HCCCCeEEEEeCChhHHHHHHH----cCCCEEEeCCC-CcccHHHHHHHHHHH-hC
Q 017868          183 TNVLIMGA-GPIGLVTMLGAPR--AFGAPRIVIVDVDDYRLSVAKE----IGADNIVKVST-NLQDIAEEVEKIQKA-MG  253 (365)
Q Consensus       183 ~~vlI~G~-g~~G~~ai~~l~~--~~g~~~vi~v~~~~~~~~~~~~----~g~~~~~~~~~-~~~~~~~~i~~~~~~-~~  253 (365)
                      ++|||+|+ +++|.++++.+++  ..|+ +|+.+.+++++.+.+++    .+-...+..+- +.++..+..+.+.+. ..
T Consensus         3 KtilITGas~GIG~a~a~~l~~~a~~g~-~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~Dvs~~~~v~~~~~~i~~~~~~   81 (248)
T d1snya_           3 NSILITGCNRGLGLGLVKALLNLPQPPQ-HLFTTCRNREQAKELEDLAKNHSNIHILEIDLRNFDAYDKLVADIEGVTKD   81 (248)
T ss_dssp             SEEEESCCSSHHHHHHHHHHHTSSSCCS-EEEEEESCTTSCHHHHHHHHHCTTEEEEECCTTCGGGHHHHHHHHHHHHGG
T ss_pred             CEEEEeCCCCHHHHHHHHHHHHHHhCCC-EEEEEECCHHHHHHHHHHHhcCCcEEEEEEEeccHHHHHHHHhhhHHHhhc
Confidence            47999987 9999998875553  3577 57777788776543332    22222333332 223444444433221 24


Q ss_pred             CCceEEEeCCC
Q 017868          254 TGIDVSFDCAG  264 (365)
Q Consensus       254 ~~~d~vid~~g  264 (365)
                      +++|+++.+.|
T Consensus        82 ~~iDiLvnNAg   92 (248)
T d1snya_          82 QGLNVLFNNAG   92 (248)
T ss_dssp             GCCSEEEECCC
T ss_pred             CCcceEEeecc
Confidence            67999999877

>d1zmta1 c.2.1.2 (A:2-253) Halohydrin dehalogenase HheC {Agrobacterium tumefaciens [TaxId: 358]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Tyrosine-dependent oxidoreductases
domain: Halohydrin dehalogenase HheC
species: Agrobacterium tumefaciens [TaxId: 358]

Probab=95.69  E-value=0.0033  Score=51.70  Aligned_cols=74  Identities=15%  Similarity=0.070  Sum_probs=48.9

Q ss_pred             EEEEEcC-CHHHHHHHHHHHHHCCCCeEEEEeCChhHHHHHHHcC----CCEEEeCCCCcccHHHHHHHHHHHhCCCceE
Q 017868          184 NVLIMGA-GPIGLVTMLGAPRAFGAPRIVIVDVDDYRLSVAKEIG----ADNIVKVSTNLQDIAEEVEKIQKAMGTGIDV  258 (365)
Q Consensus       184 ~vlI~G~-g~~G~~ai~~l~~~~g~~~vi~v~~~~~~~~~~~~~g----~~~~~~~~~~~~~~~~~i~~~~~~~~~~~d~  258 (365)
                      ++||+|+ +++|.++++.+ ...|+ +|+.++++.++.+.++..+    ...+    .+.++..+.+++..+.. +++|+
T Consensus         2 TAlVTGas~GiG~aiA~~l-a~~Ga-~V~i~~r~~~~~~~~~~~~~~~~~~dv----~~~~~~~~~~~~~~~~~-G~iDi   74 (252)
T d1zmta1           2 TAIVTNVKHFGGMGSALRL-SEAGH-TVACHDESFKQKDELEAFAETYPQLKP----MSEQEPAELIEAVTSAY-GQVDV   74 (252)
T ss_dssp             EEEESSTTSTTHHHHHHHH-HHTTC-EEEECCGGGGSHHHHHHHHHHCTTSEE----CCCCSHHHHHHHHHHHH-SCCCE
T ss_pred             EEEEECCCCHHHHHHHHHH-HHCCC-EEEEEECCHHHHHHHHhhhCcEEEecc----CCHHHHHHHHHHHHHHc-CCCCE
Confidence            6899987 89999999945 45699 6777777776665544432    2222    22345555566555443 58999


Q ss_pred             EEeCCC
Q 017868          259 SFDCAG  264 (365)
Q Consensus       259 vid~~g  264 (365)
                      ++.+.|
T Consensus        75 LVnNAg   80 (252)
T d1zmta1          75 LVSNDI   80 (252)
T ss_dssp             EEEECC
T ss_pred             EEECCc
Confidence            998765

>d2hmva1 c.2.1.9 (A:7-140) Ktn bsu222 {Bacillus subtilis [TaxId: 1423]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Potassium channel NAD-binding domain
domain: Ktn bsu222
species: Bacillus subtilis [TaxId: 1423]

Probab=95.65  E-value=0.037  Score=40.04  Aligned_cols=74  Identities=11%  Similarity=0.219  Sum_probs=52.1

Q ss_pred             EEEEEcCCHHHHHHHHHHHHHCCCCeEEEEeCChhHHHHHHHcCCCEEEeCCCCcccHHHHHHHHHHHhCCCceEEEeCC
Q 017868          184 NVLIMGAGPIGLVTMLGAPRAFGAPRIVIVDVDDYRLSVAKEIGADNIVKVSTNLQDIAEEVEKIQKAMGTGIDVSFDCA  263 (365)
Q Consensus       184 ~vlI~G~g~~G~~ai~~l~~~~g~~~vi~v~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~i~~~~~~~~~~~d~vid~~  263 (365)
                      +++|.|.|.+|..+++ .+...|. .|++++.++++.+.++..+...+ .-+..+++.   +++.   .-..+|.++-++
T Consensus         2 ~~iIiG~G~~G~~la~-~L~~~g~-~vvvid~d~~~~~~~~~~~~~~~-~gd~~~~~~---l~~a---~i~~a~~vi~~~   72 (134)
T d2hmva1           2 QFAVIGLGRFGGSIVK-ELHRMGH-EVLAVDINEEKVNAYASYATHAV-IANATEENE---LLSL---GIRNFEYVIVAI   72 (134)
T ss_dssp             CEEEECCSHHHHHHHH-HHHHTTC-CCEEEESCHHHHHHTTTTCSEEE-ECCTTCTTH---HHHH---TGGGCSEEEECC
T ss_pred             EEEEECCCHHHHHHHH-HHHHCCC-eEEEecCcHHHHHHHHHhCCcce-eeecccchh---hhcc---CCccccEEEEEc
Confidence            5788899999999999 6667798 57888999999998888776443 333333333   2222   124688888877


Q ss_pred             CCH
Q 017868          264 GLN  266 (365)
Q Consensus       264 g~~  266 (365)
                      ++.
T Consensus        73 ~~~   75 (134)
T d2hmva1          73 GAN   75 (134)
T ss_dssp             CSC
T ss_pred             Cch
Confidence            753

>d1u2za_ c.66.1.31 (A:) Catalytic, N-terminal domain of histone methyltransferase Dot1l {Baker's yeast (Saccharomyces cerevisiae) [TaxId: 4932]}

class: Alpha and beta proteins (a/b)
fold: S-adenosyl-L-methionine-dependent methyltransferases
superfamily: S-adenosyl-L-methionine-dependent methyltransferases
family: Catalytic, N-terminal domain of histone methyltransferase Dot1l
domain: Catalytic, N-terminal domain of histone methyltransferase Dot1l
species: Baker's yeast (Saccharomyces cerevisiae) [TaxId: 4932]

Probab=95.59  E-value=0.077  Score=46.17  Aligned_cols=110  Identities=14%  Similarity=0.111  Sum_probs=68.9

Q ss_pred             HHHHHHhcCCCCCCEEEEEcCCHHHHHHHHHHHHHCCCCeEEEEeCChhHHHHHHHc-----------CC--C-EEEeCC
Q 017868          170 GLHACRRANIGPETNVLIMGAGPIGLVTMLGAPRAFGAPRIVIVDVDDYRLSVAKEI-----------GA--D-NIVKVS  235 (365)
Q Consensus       170 a~~~~~~~~~~~g~~vlI~G~g~~G~~ai~~l~~~~g~~~vi~v~~~~~~~~~~~~~-----------g~--~-~~~~~~  235 (365)
                      ....++..++++|+++|=+|+|. |..+++ +|+..|+..+++++.++...+.+++.           +.  . ......
T Consensus       205 i~~Il~~l~Lkpgd~fLDLGCG~-G~~vl~-aA~~~g~~~v~GIDiS~~~i~~Ak~~~~e~~~~~~~~g~~~~~~~~~~~  282 (406)
T d1u2za_         205 LSDVYQQCQLKKGDTFMDLGSGV-GNCVVQ-AALECGCALSFGCEIMDDASDLTILQYEELKKRCKLYGMRLNNVEFSLK  282 (406)
T ss_dssp             HHHHHHHTTCCTTCEEEEESCTT-SHHHHH-HHHHHCCSEEEEEECCHHHHHHHHHHHHHHHHHHHHTTBCCCCEEEEES
T ss_pred             HHHHHHHhCCCCCCEEEeCCCCC-cHHHHH-HHHHcCCCeEEEEeCCHHHHHHHHHHHHHHhhhhhhhccccccceeeee
Confidence            44556888999999988889864 888889 88888987899999998776655432           11  1 111111


Q ss_pred             CCcccHHHHHHHHHHHhCCCceEEEeCC--CCH---HHHHHHHHhcccCCEEEEEc
Q 017868          236 TNLQDIAEEVEKIQKAMGTGIDVSFDCA--GLN---KTMSTALGATCAGGKVCLVG  286 (365)
Q Consensus       236 ~~~~~~~~~i~~~~~~~~~~~d~vid~~--g~~---~~~~~~~~~l~~~G~~~~~g  286 (365)
                      ....+ .......    -..+|+++-..  ..+   ..+...++.|++||+++...
T Consensus       283 ~~f~~-~~~~d~~----~~~adVV~inn~~f~~~l~~~L~ei~r~LKPGGrIVs~~  333 (406)
T d1u2za_         283 KSFVD-NNRVAEL----IPQCDVILVNNFLFDEDLNKKVEKILQTAKVGCKIISLK  333 (406)
T ss_dssp             SCSTT-CHHHHHH----GGGCSEEEECCTTCCHHHHHHHHHHHTTCCTTCEEEESS
T ss_pred             echhh-ccccccc----cccceEEEEecccCchHHHHHHHHHHHhcCCCcEEEEec
Confidence            11111 1111111    24577777421  122   34557888999999998753

>d2pd4a1 c.2.1.2 (A:2-275) Enoyl-ACP reductase {Helicobacter pylori [TaxId: 210]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Tyrosine-dependent oxidoreductases
domain: Enoyl-ACP reductase
species: Helicobacter pylori [TaxId: 210]

Probab=95.56  E-value=0.055  Score=44.48  Aligned_cols=81  Identities=12%  Similarity=0.192  Sum_probs=49.0

Q ss_pred             CCCEEEEEcC-C--HHHHHHHHHHHHHCCCCeEEEEeCChhH---HH-HHHHcCCCEEEeCCC-CcccHHHHHHHHHHHh
Q 017868          181 PETNVLIMGA-G--PIGLVTMLGAPRAFGAPRIVIVDVDDYR---LS-VAKEIGADNIVKVST-NLQDIAEEVEKIQKAM  252 (365)
Q Consensus       181 ~g~~vlI~G~-g--~~G~~ai~~l~~~~g~~~vi~v~~~~~~---~~-~~~~~g~~~~~~~~~-~~~~~~~~i~~~~~~~  252 (365)
                      +|+++||+|+ |  ++|.++++.+ ...|+ +|+.++++++.   .+ +..+.+...+...+- ...+..+.+.+..+. 
T Consensus         4 ~gK~alITGaag~~GIG~AiA~~l-a~~Ga-~V~i~~r~~~~~~~~~~l~~~~~~~~~~~~d~~~~~~~~~~~~~~~~~-   80 (274)
T d2pd4a1           4 KGKKGLIVGVANNKSIAYGIAQSC-FNQGA-TLAFTYLNESLEKRVRPIAQELNSPYVYELDVSKEEHFKSLYNSVKKD-   80 (274)
T ss_dssp             TTCEEEEECCCSTTSHHHHHHHHH-HTTTC-EEEEEESSTTTHHHHHHHHHHTTCCCEEECCTTCHHHHHHHHHHHHHH-
T ss_pred             CCCEEEEECCCCCcHHHHHHHHHH-HHCCC-EEEEEeCCHHHHHHHHHHHhhCCceeEeeecccchhhHHHHHHHHHHH-
Confidence            5899999986 4  6999999945 46699 57777776532   22 223333333333222 223333344444432 


Q ss_pred             CCCceEEEeCCC
Q 017868          253 GTGIDVSFDCAG  264 (365)
Q Consensus       253 ~~~~d~vid~~g  264 (365)
                      -+++|+++.+.|
T Consensus        81 ~g~id~lV~nag   92 (274)
T d2pd4a1          81 LGSLDFIVHSVA   92 (274)
T ss_dssp             TSCEEEEEECCC
T ss_pred             cCCCCeEEeecc
Confidence            468999998877

>d2g5ca2 c.2.1.6 (A:30-200) Prephenate dehydrogenase TyrA {Aquifex aeolicus [TaxId: 63363]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: 6-phosphogluconate dehydrogenase-like, N-terminal domain
domain: Prephenate dehydrogenase TyrA
species: Aquifex aeolicus [TaxId: 63363]

Probab=95.53  E-value=0.11  Score=39.23  Aligned_cols=92  Identities=20%  Similarity=0.124  Sum_probs=60.2

Q ss_pred             EEEEEcCCHHHHHHHHHHHHHCCC-CeEEEEeCChhHHHHHHHcCCCEEEeCCCCcccHHHHHHHHHHHhCCCceEEEeC
Q 017868          184 NVLIMGAGPIGLVTMLGAPRAFGA-PRIVIVDVDDYRLSVAKEIGADNIVKVSTNLQDIAEEVEKIQKAMGTGIDVSFDC  262 (365)
Q Consensus       184 ~vlI~G~g~~G~~ai~~l~~~~g~-~~vi~v~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~i~~~~~~~~~~~d~vid~  262 (365)
                      +|+|.|+|.+|...+. .++..|. ..|++.+++++..+.+++.+.......+.  ...          .....|+|+-|
T Consensus         3 ~I~IIG~G~mG~sla~-~L~~~g~~~~I~~~D~~~~~~~~a~~~~~~~~~~~~~--~~~----------~~~~~dlIila   69 (171)
T d2g5ca2           3 NVLIVGVGFMGGSFAK-SLRRSGFKGKIYGYDINPESISKAVDLGIIDEGTTSI--AKV----------EDFSPDFVMLS   69 (171)
T ss_dssp             EEEEESCSHHHHHHHH-HHHHTTCCSEEEEECSCHHHHHHHHHTTSCSEEESCG--GGG----------GGTCCSEEEEC
T ss_pred             EEEEEccCHHHHHHHH-HHHhcCCCeEEEEEECChHHHHHHHHhhcchhhhhhh--hhh----------hcccccccccc
Confidence            6899999999998888 5566675 36888999999999999988632222111  000          02467888888


Q ss_pred             CCCHH---HHHHHHHhcccCCEEEEEccC
Q 017868          263 AGLNK---TMSTALGATCAGGKVCLVGMG  288 (365)
Q Consensus       263 ~g~~~---~~~~~~~~l~~~G~~~~~g~~  288 (365)
                      +-...   .+......+.++..++.++..
T Consensus        70 ~p~~~~~~vl~~l~~~~~~~~ii~d~~s~   98 (171)
T d2g5ca2          70 SPVRTFREIAKKLSYILSEDATVTDQGSV   98 (171)
T ss_dssp             SCHHHHHHHHHHHHHHSCTTCEEEECCSC
T ss_pred             CCchhhhhhhhhhhccccccccccccccc
Confidence            77432   223344556666666666543

>d2o57a1 c.66.1.18 (A:16-297) Putative sarcosine dimethylglycine methyltransferase {Red algae (Galdieria sulphuraria) [TaxId: 130081]}

class: Alpha and beta proteins (a/b)
fold: S-adenosyl-L-methionine-dependent methyltransferases
superfamily: S-adenosyl-L-methionine-dependent methyltransferases
family: Mycolic acid cyclopropane synthase
domain: Putative sarcosine dimethylglycine methyltransferase
species: Red algae (Galdieria sulphuraria) [TaxId: 130081]

Probab=95.53  E-value=0.078  Score=43.75  Aligned_cols=99  Identities=15%  Similarity=0.187  Sum_probs=65.8

Q ss_pred             HhcCCCCCCEEEEEcCCHHHHHHHHHHHHHCCCCeEEEEeCChhHHHHHHH----cCCC---EEEeCCCCcccHHHHHHH
Q 017868          175 RRANIGPETNVLIMGAGPIGLVTMLGAPRAFGAPRIVIVDVDDYRLSVAKE----IGAD---NIVKVSTNLQDIAEEVEK  247 (365)
Q Consensus       175 ~~~~~~~g~~vlI~G~g~~G~~ai~~l~~~~g~~~vi~v~~~~~~~~~~~~----~g~~---~~~~~~~~~~~~~~~i~~  247 (365)
                      ....+.++++||=.|+|. |..+.. +++..|+ .|++++.++...+.+++    .|..   .++.  .+..++.     
T Consensus        61 ~~~~l~~~~~vLDiGcG~-G~~~~~-la~~~~~-~v~gvD~s~~~i~~a~~~~~~~gl~~~v~~~~--~d~~~l~-----  130 (282)
T d2o57a1          61 MTGVLQRQAKGLDLGAGY-GGAARF-LVRKFGV-SIDCLNIAPVQNKRNEEYNNQAGLADNITVKY--GSFLEIP-----  130 (282)
T ss_dssp             HTTCCCTTCEEEEETCTT-SHHHHH-HHHHHCC-EEEEEESCHHHHHHHHHHHHHHTCTTTEEEEE--CCTTSCS-----
T ss_pred             HhcCCCCCCEEEEeCCCC-cHHHhh-hhccCCc-EEEEEeccchhhhhhhcccccccccccccccc--ccccccc-----
Confidence            456789999999999864 666667 7777788 68999999877665543    3432   1222  1111210     


Q ss_pred             HHHHhCCCceEEEeCCC------CHHHHHHHHHhcccCCEEEEEc
Q 017868          248 IQKAMGTGIDVSFDCAG------LNKTMSTALGATCAGGKVCLVG  286 (365)
Q Consensus       248 ~~~~~~~~~d~vid~~g------~~~~~~~~~~~l~~~G~~~~~g  286 (365)
                         ...+.+|+|+..-.      ....+..+.++|+++|++++..
T Consensus       131 ---~~~~sfD~V~~~~~l~h~~d~~~~l~~~~~~LkpgG~l~~~~  172 (282)
T d2o57a1         131 ---CEDNSYDFIWSQDAFLHSPDKLKVFQECARVLKPRGVMAITD  172 (282)
T ss_dssp             ---SCTTCEEEEEEESCGGGCSCHHHHHHHHHHHEEEEEEEEEEE
T ss_pred             ---ccccccchhhccchhhhccCHHHHHHHHHHhcCCCcEEEEEE
Confidence               01367999976322      2346778999999999988764

>d2czca2 c.2.1.3 (A:1-139,A:302-334) Glyceraldehyde-3-phosphate dehydrogenase (GAPDH) {Archaeon Pyrococcus horikoshii [TaxId: 53953]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Glyceraldehyde-3-phosphate dehydrogenase-like, N-terminal domain
domain: Glyceraldehyde-3-phosphate dehydrogenase (GAPDH)
species: Archaeon Pyrococcus horikoshii [TaxId: 53953]

Probab=95.50  E-value=0.038  Score=42.07  Aligned_cols=100  Identities=19%  Similarity=0.148  Sum_probs=62.4

Q ss_pred             EEEEEcCCHHHHHHHHHHHHHCCCCeEEEE-eCC-hhHHHHHHHcCCCEEEeCCCCcccHHHHHHHHH-------HHhCC
Q 017868          184 NVLIMGAGPIGLVTMLGAPRAFGAPRIVIV-DVD-DYRLSVAKEIGADNIVKVSTNLQDIAEEVEKIQ-------KAMGT  254 (365)
Q Consensus       184 ~vlI~G~g~~G~~ai~~l~~~~g~~~vi~v-~~~-~~~~~~~~~~g~~~~~~~~~~~~~~~~~i~~~~-------~~~~~  254 (365)
                      +|.|.|-|-+|...+..+...-..+ ++++ +.+ +.....+.+++.+.......   .. .......       .....
T Consensus         4 rIaINGfGRIGR~v~Ral~~~~die-iVaINd~~~~~~~~~l~~~~~~~~~~~~~---~~-~~~~~~~~~~~~~~~~~~~   78 (172)
T d2czca2           4 KVGVNGYGTIGKRVAYAVTKQDDME-LIGITKTKPDFEAYRAKELGIPVYAASEE---FI-PRFEKEGFEVAGTLNDLLE   78 (172)
T ss_dssp             EEEEECCSHHHHHHHHHHHTCTTEE-EEEEEESSCSHHHHHHHHTTCCEEESSGG---GH-HHHHHHTCCCSCBHHHHHT
T ss_pred             EEEEECCCHHHHHHHHHHHhCCCce-EEEEecCCChHHHHHhhhcCceeeccccc---ce-eeecccCccccchhhhhhc
Confidence            6889999999998888454444453 4444 333 34556667777654432111   11 1111100       00024


Q ss_pred             CceEEEeCCCCHHHHHHHHHhcccCCEEEEEccC
Q 017868          255 GIDVSFDCAGLNKTMSTALGATCAGGKVCLVGMG  288 (365)
Q Consensus       255 ~~d~vid~~g~~~~~~~~~~~l~~~G~~~~~g~~  288 (365)
                      ++|+|+||+|.-...+.+-.++..+-+.++.+..
T Consensus        79 ~vDvViEcTG~f~~~~~~~~hl~~G~k~Vi~s~~  112 (172)
T d2czca2          79 KVDIIVDATPGGIGAKNKPLYEKAGVKAIFQGGE  112 (172)
T ss_dssp             TCSEEEECCSTTHHHHHHHHHHHHTCEEEECTTS
T ss_pred             cCCEEEECCCCCCCHHHHHHHHHcCCCEEEECCC
Confidence            7999999999877777888889999888887654

>d1x1ta1 c.2.1.2 (A:1-260) D(-)-3-hydroxybutyrate dehydrogenase {Pseudomonas fragi [TaxId: 296]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Tyrosine-dependent oxidoreductases
domain: D(-)-3-hydroxybutyrate dehydrogenase
species: Pseudomonas fragi [TaxId: 296]

Probab=95.47  E-value=0.041  Score=45.03  Aligned_cols=81  Identities=22%  Similarity=0.275  Sum_probs=49.9

Q ss_pred             CCCEEEEEcC-CHHHHHHHHHHHHHCCCCeEEEEeCCh-hHHHH-----HHHcCCCEE-EeCCC-CcccHHHHHHHHHHH
Q 017868          181 PETNVLIMGA-GPIGLVTMLGAPRAFGAPRIVIVDVDD-YRLSV-----AKEIGADNI-VKVST-NLQDIAEEVEKIQKA  251 (365)
Q Consensus       181 ~g~~vlI~G~-g~~G~~ai~~l~~~~g~~~vi~v~~~~-~~~~~-----~~~~g~~~~-~~~~~-~~~~~~~~i~~~~~~  251 (365)
                      +|+++||+|+ +++|.++++.++ ..|+ +|+.+++++ ++.+.     .+..|.... +..+- +.++..+.+++..+.
T Consensus         3 ~gK~alITGas~GIG~aiA~~la-~~Ga-~V~~~~r~~~~~~~~~~~~~~~~~g~~~~~~~~Dv~~~~~v~~~~~~~~~~   80 (260)
T d1x1ta1           3 KGKVAVVTGSTSGIGLGIATALA-AQGA-DIVLNGFGDAAEIEKVRAGLAAQHGVKVLYDGADLSKGEAVRGLVDNAVRQ   80 (260)
T ss_dssp             TTCEEEETTCSSHHHHHHHHHHH-HTTC-EEEEECCSCHHHHHHHHHHHHHHHTSCEEEECCCTTSHHHHHHHHHHHHHH
T ss_pred             CcCEEEEeCCCCHHHHHHHHHHH-HCCC-EEEEEeCCcHHHHHHHHHHHHHhcCCcEEEEECCCCCHHHHHHHHHHHHHH
Confidence            5788999987 999999999555 5699 577777653 33332     233454332 22222 233444444444443


Q ss_pred             hCCCceEEEeCCC
Q 017868          252 MGTGIDVSFDCAG  264 (365)
Q Consensus       252 ~~~~~d~vid~~g  264 (365)
                      . +++|++|.++|
T Consensus        81 ~-G~iDiLVnnAG   92 (260)
T d1x1ta1          81 M-GRIDILVNNAG   92 (260)
T ss_dssp             H-SCCSEEEECCC
T ss_pred             h-CCCcEEEeecc
Confidence            3 57999999888

>d1nt2a_ c.66.1.3 (A:) Fibrillarin homologue {Archaeon Archaeoglobus fulgidus [TaxId: 2234]}

class: Alpha and beta proteins (a/b)
fold: S-adenosyl-L-methionine-dependent methyltransferases
superfamily: S-adenosyl-L-methionine-dependent methyltransferases
family: Fibrillarin homologue
domain: Fibrillarin homologue
species: Archaeon Archaeoglobus fulgidus [TaxId: 2234]

Probab=95.40  E-value=0.057  Score=42.52  Aligned_cols=101  Identities=13%  Similarity=0.065  Sum_probs=62.9

Q ss_pred             hcCCCCCCEEEEEcCCHHHHHHHHHHHHHCCCCeEEEEeCChhHHHHH----HHcCCCEEEeCCCCcccHHHHHHHHHHH
Q 017868          176 RANIGPETNVLIMGAGPIGLVTMLGAPRAFGAPRIVIVDVDDYRLSVA----KEIGADNIVKVSTNLQDIAEEVEKIQKA  251 (365)
Q Consensus       176 ~~~~~~g~~vlI~G~g~~G~~ai~~l~~~~g~~~vi~v~~~~~~~~~~----~~~g~~~~~~~~~~~~~~~~~i~~~~~~  251 (365)
                      ...++||++||=.|+|. |..+.. +++..+...|++++.+++..+.+    +..+-...+..+........       .
T Consensus        51 ~l~lkpg~~VLDlGcG~-G~~~~~-la~~v~~g~V~gvDis~~~i~~a~~~a~~~~ni~~i~~d~~~~~~~~-------~  121 (209)
T d1nt2a_          51 RLKLRGDERVLYLGAAS-GTTVSH-LADIVDEGIIYAVEYSAKPFEKLLELVRERNNIIPLLFDASKPWKYS-------G  121 (209)
T ss_dssp             CCCCCSSCEEEEETCTT-SHHHHH-HHHHTTTSEEEEECCCHHHHHHHHHHHHHCSSEEEECSCTTCGGGTT-------T
T ss_pred             cCCCCCCCEEEEeCCcC-CHHHHH-HHHhccCCeEEEEeCCHHHHHHHHHHhhccCCceEEEeeccCccccc-------c
Confidence            46789999999999854 555555 66666656899999998776644    33443333332222211100       0


Q ss_pred             hCCCceEEEeCCCCH----HHHHHHHHhcccCCEEEEE
Q 017868          252 MGTGIDVSFDCAGLN----KTMSTALGATCAGGKVCLV  285 (365)
Q Consensus       252 ~~~~~d~vid~~g~~----~~~~~~~~~l~~~G~~~~~  285 (365)
                      .-..+|+++......    ..+..+.+.|+++|.++..
T Consensus       122 ~~~~vd~v~~~~~~~~~~~~~l~~~~~~LkpgG~l~i~  159 (209)
T d1nt2a_         122 IVEKVDLIYQDIAQKNQIEILKANAEFFLKEKGEVVIM  159 (209)
T ss_dssp             TCCCEEEEEECCCSTTHHHHHHHHHHHHEEEEEEEEEE
T ss_pred             ccceEEEEEecccChhhHHHHHHHHHHHhccCCeEEEE
Confidence            134678876644321    2455678899999998765

>d1l3ia_ c.66.1.22 (A:) Precorrin-6Y methyltransferase (CbiT) {Archaeon Methanobacterium thermoautotrophicum [TaxId: 145262]}

class: Alpha and beta proteins (a/b)
fold: S-adenosyl-L-methionine-dependent methyltransferases
superfamily: S-adenosyl-L-methionine-dependent methyltransferases
family: Precorrin-6Y methyltransferase (CbiT)
domain: Precorrin-6Y methyltransferase (CbiT)
species: Archaeon Methanobacterium thermoautotrophicum [TaxId: 145262]

Probab=95.38  E-value=0.046  Score=42.15  Aligned_cols=100  Identities=18%  Similarity=0.217  Sum_probs=64.2

Q ss_pred             HhcCCCCCCEEEEEcCCHHHHHHHHHHHHHCCCCeEEEEeCChhHHHHH----HHcCCC-EEEeCCCCcccHHHHHHHHH
Q 017868          175 RRANIGPETNVLIMGAGPIGLVTMLGAPRAFGAPRIVIVDVDDYRLSVA----KEIGAD-NIVKVSTNLQDIAEEVEKIQ  249 (365)
Q Consensus       175 ~~~~~~~g~~vlI~G~g~~G~~ai~~l~~~~g~~~vi~v~~~~~~~~~~----~~~g~~-~~~~~~~~~~~~~~~i~~~~  249 (365)
                      ...++++|++||=.|+|. |..++. +++. +. +|++++.+++..+.+    +++|.. .+.....   +..+...   
T Consensus        27 ~~l~~~~g~~VLDiGcGs-G~~s~~-lA~~-~~-~V~avD~~~~~l~~a~~n~~~~gl~~~v~~~~g---da~~~~~---   96 (186)
T d1l3ia_          27 CLAEPGKNDVAVDVGCGT-GGVTLE-LAGR-VR-RVYAIDRNPEAISTTEMNLQRHGLGDNVTLMEG---DAPEALC---   96 (186)
T ss_dssp             HHHCCCTTCEEEEESCTT-SHHHHH-HHTT-SS-EEEEEESCHHHHHHHHHHHHHTTCCTTEEEEES---CHHHHHT---
T ss_pred             HhcCCCCCCEEEEEECCe-Eccccc-cccc-ce-EEEEecCCHHHHHHHHHHHHHcCCCcceEEEEC---chhhccc---
Confidence            456889999999998754 555566 5544 44 799999998876554    456653 3222212   2222211   


Q ss_pred             HHhCCCceEEEeCCCC---HHHHHHHHHhcccCCEEEEEc
Q 017868          250 KAMGTGIDVSFDCAGL---NKTMSTALGATCAGGKVCLVG  286 (365)
Q Consensus       250 ~~~~~~~d~vid~~g~---~~~~~~~~~~l~~~G~~~~~g  286 (365)
                        ....+|.|+.....   ...+..+.+.|+++|+++...
T Consensus        97 --~~~~~D~v~~~~~~~~~~~~~~~~~~~LkpgG~lvi~~  134 (186)
T d1l3ia_          97 --KIPDIDIAVVGGSGGELQEILRIIKDKLKPGGRIIVTA  134 (186)
T ss_dssp             --TSCCEEEEEESCCTTCHHHHHHHHHHTEEEEEEEEEEE
T ss_pred             --ccCCcCEEEEeCccccchHHHHHHHHHhCcCCEEEEEe
Confidence              24689988864332   346677888999999987653

>d2bd0a1 c.2.1.2 (A:2-241) Bacterial sepiapterin reductase {Chlorobium tepidum [TaxId: 1097]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Tyrosine-dependent oxidoreductases
domain: Bacterial sepiapterin reductase
species: Chlorobium tepidum [TaxId: 1097]

Probab=95.29  E-value=0.068  Score=43.07  Aligned_cols=79  Identities=24%  Similarity=0.260  Sum_probs=49.2

Q ss_pred             EEEEEcC-CHHHHHHHHHHHHHCCCC------eEEEEeCChhHHHHH----HHcCCCE-EEeCCC-CcccHHHHHHHHHH
Q 017868          184 NVLIMGA-GPIGLVTMLGAPRAFGAP------RIVIVDVDDYRLSVA----KEIGADN-IVKVST-NLQDIAEEVEKIQK  250 (365)
Q Consensus       184 ~vlI~G~-g~~G~~ai~~l~~~~g~~------~vi~v~~~~~~~~~~----~~~g~~~-~~~~~~-~~~~~~~~i~~~~~  250 (365)
                      .|||+|+ +++|.+++..+++. |++      .++.+++++++.+.+    ++.|... .+..+- +.++..+.+++..+
T Consensus         3 VvlITGas~GIG~aia~~la~~-G~~~~~~~~~v~~~~r~~~~l~~~~~~~~~~g~~~~~~~~Dvt~~~~v~~~~~~~~~   81 (240)
T d2bd0a1           3 ILLITGAGKGIGRAIALEFARA-ARHHPDFEPVLVLSSRTAADLEKISLECRAEGALTDTITADISDMADVRRLTTHIVE   81 (240)
T ss_dssp             EEEEETTTSHHHHHHHHHHHHH-TTTCTTCCEEEEEEESCHHHHHHHHHHHHTTTCEEEEEECCTTSHHHHHHHHHHHHH
T ss_pred             EEEEccCCCHHHHHHHHHHHHh-CccccccCcEEEEEeCCHHHHHHHHHHHHhcCCcEEEEEecCCCHHHHHHHHHHHHH
Confidence            4688887 99999999956644 885      377778888776533    3344332 222222 22344444444444


Q ss_pred             HhCCCceEEEeCCC
Q 017868          251 AMGTGIDVSFDCAG  264 (365)
Q Consensus       251 ~~~~~~d~vid~~g  264 (365)
                      . -+.+|+++++.|
T Consensus        82 ~-~g~iDilvnnAg   94 (240)
T d2bd0a1          82 R-YGHIDCLVNNAG   94 (240)
T ss_dssp             H-TSCCSEEEECCC
T ss_pred             H-cCCcceeecccc
Confidence            3 468999999887

>d1qsga_ c.2.1.2 (A:) Enoyl-ACP reductase {Escherichia coli [TaxId: 562]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Tyrosine-dependent oxidoreductases
domain: Enoyl-ACP reductase
species: Escherichia coli [TaxId: 562]

Probab=95.21  E-value=0.052  Score=44.14  Aligned_cols=82  Identities=15%  Similarity=0.164  Sum_probs=48.0

Q ss_pred             CCCCEEEEEcC-C--HHHHHHHHHHHHHCCCCeEEEEeCChhHHHH----HHHcCCCEEEeCCCC-cccHHHHHHHHHHH
Q 017868          180 GPETNVLIMGA-G--PIGLVTMLGAPRAFGAPRIVIVDVDDYRLSV----AKEIGADNIVKVSTN-LQDIAEEVEKIQKA  251 (365)
Q Consensus       180 ~~g~~vlI~G~-g--~~G~~ai~~l~~~~g~~~vi~v~~~~~~~~~----~~~~g~~~~~~~~~~-~~~~~~~i~~~~~~  251 (365)
                      -+|+++||+|+ +  ++|.+++..+ ...|++ |+.+.++++..+.    ....+.......+.. ..+......+.. .
T Consensus         3 L~gK~~lITGass~~GIG~aiA~~l-~~~G~~-V~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~   79 (258)
T d1qsga_           3 LSGKRILVTGVASKLSIAYGIAQAM-HREGAE-LAFTYQNDKLKGRVEEFAAQLGSDIVLQCDVAEDASIDTMFAELG-K   79 (258)
T ss_dssp             TTTCEEEECCCCSTTSHHHHHHHHH-HHTTCE-EEEEESSTTTHHHHHHHHHHTTCCCEEECCTTCHHHHHHHHHHHH-T
T ss_pred             CCCCEEEEECCCCchhHHHHHHHHH-HHcCCE-EEEEeCCHHHHHHHHHHHhhcCCcceeecccchHHHHHHHHHHhh-h
Confidence            36899999987 5  6889888845 466995 6666777654433    333444443333222 222222222222 2


Q ss_pred             hCCCceEEEeCCC
Q 017868          252 MGTGIDVSFDCAG  264 (365)
Q Consensus       252 ~~~~~d~vid~~g  264 (365)
                      .....|+.+++++
T Consensus        80 ~~~~~d~~v~~a~   92 (258)
T d1qsga_          80 VWPKFDGFVHSIG   92 (258)
T ss_dssp             TCSSEEEEEECCC
T ss_pred             cccccceEEEeec
Confidence            3567899998765

>d2bzga1 c.66.1.36 (A:17-245) Thiopurine S-methyltransferase {Human (Homo sapiens) [TaxId: 9606]}

class: Alpha and beta proteins (a/b)
fold: S-adenosyl-L-methionine-dependent methyltransferases
superfamily: S-adenosyl-L-methionine-dependent methyltransferases
family: Thiopurine S-methyltransferase
domain: Thiopurine S-methyltransferase
species: Human (Homo sapiens) [TaxId: 9606]

Probab=95.06  E-value=0.011  Score=47.55  Aligned_cols=106  Identities=10%  Similarity=-0.013  Sum_probs=64.1

Q ss_pred             cCCCCCCEEEEEcCCHHHHHHHHHHHHHCCCCeEEEEeCChhHHHHHHHc-CCCEEE------------eCCCCcccH-H
Q 017868          177 ANIGPETNVLIMGAGPIGLVTMLGAPRAFGAPRIVIVDVDDYRLSVAKEI-GADNIV------------KVSTNLQDI-A  242 (365)
Q Consensus       177 ~~~~~g~~vlI~G~g~~G~~ai~~l~~~~g~~~vi~v~~~~~~~~~~~~~-g~~~~~------------~~~~~~~~~-~  242 (365)
                      ..+.++.+||..|+|. |..+.. +++ .|+ .|+++|.+++-.+.+++. +.....            ......-++ .
T Consensus        41 l~~~~~~rvLd~GCG~-G~~a~~-LA~-~G~-~V~gvD~S~~ai~~a~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~  116 (229)
T d2bzga1          41 LKGKSGLRVFFPLCGK-AVEMKW-FAD-RGH-SVVGVEISELGIQEFFTEQNLSYSEEPITEIPGTKVFKSSSGNISLYC  116 (229)
T ss_dssp             HTTCCSCEEEETTCTT-CTHHHH-HHH-TTC-EEEEECSCHHHHHHHHHHTTCCEEEEECTTSTTCEEEEETTSSEEEEE
T ss_pred             cCCCCCCEEEEeCCCC-cHHHHH-HHh-CCC-cEEEEeCCHHHHHHHHHHhhccccccchhcccccceeeecCCcEEEEE
Confidence            4578899999999875 777777 765 499 799999999988876553 221110            000000000 0


Q ss_pred             HHHHHHHHHhCCCceEEEeCCC--------CHHHHHHHHHhcccCCEEEEEc
Q 017868          243 EEVEKIQKAMGTGIDVSFDCAG--------LNKTMSTALGATCAGGKVCLVG  286 (365)
Q Consensus       243 ~~i~~~~~~~~~~~d~vid~~g--------~~~~~~~~~~~l~~~G~~~~~g  286 (365)
                      ..+.++.......+|+|+++.-        ....+....++|+++|++++..
T Consensus       117 ~d~~~l~~~~~~~fd~i~~~~~l~~~~~~~r~~~~~~~~~~LkpgG~~~l~~  168 (229)
T d2bzga1         117 CSIFDLPRTNIGKFDMIWDRGALVAINPGDRKCYADTMFSLLGKKFQYLLCV  168 (229)
T ss_dssp             SCGGGGGGSCCCCEEEEEESSSTTTSCGGGHHHHHHHHHHTEEEEEEEEEEE
T ss_pred             cchhhccccccCceeEEEEEEEEEeccchhhHHHHHHHHhhcCCcceEEEEE
Confidence            0000111112467899998542        1245567889999999987664

>d1yqga2 c.2.1.6 (A:1-152) Pyrroline-5-carboxylate reductase ProC {Neisseria meningitidis, serogroup B [TaxId: 487]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: 6-phosphogluconate dehydrogenase-like, N-terminal domain
domain: Pyrroline-5-carboxylate reductase ProC
species: Neisseria meningitidis, serogroup B [TaxId: 487]

Probab=94.97  E-value=0.14  Score=37.86  Aligned_cols=83  Identities=23%  Similarity=0.288  Sum_probs=56.5

Q ss_pred             EEEEEcCCHHHHHHHHHHHHHCCCCeEEEEeCChhHHHHH-HHcCCCEEEeCCCCcccHHHHHHHHHHHhCCCceEEEeC
Q 017868          184 NVLIMGAGPIGLVTMLGAPRAFGAPRIVIVDVDDYRLSVA-KEIGADNIVKVSTNLQDIAEEVEKIQKAMGTGIDVSFDC  262 (365)
Q Consensus       184 ~vlI~G~g~~G~~ai~~l~~~~g~~~vi~v~~~~~~~~~~-~~~g~~~~~~~~~~~~~~~~~i~~~~~~~~~~~d~vid~  262 (365)
                      +|.+.|+|.+|.+.++-+.+. |...+.+.++++++.+.+ +++|....-+    .+.            -...|+||=|
T Consensus         2 kI~fIG~G~MG~ai~~~l~~~-~~~~i~v~~r~~~~~~~l~~~~~~~~~~~----~~~------------v~~~Div~la   64 (152)
T d1yqga2           2 NVYFLGGGNMAAAVAGGLVKQ-GGYRIYIANRGAEKRERLEKELGVETSAT----LPE------------LHSDDVLILA   64 (152)
T ss_dssp             EEEEECCSHHHHHHHHHHHHH-CSCEEEEECSSHHHHHHHHHHTCCEEESS----CCC------------CCTTSEEEEC
T ss_pred             EEEEEcCcHHHHHHHHHHHHC-CCCcEEEEeCChhHHHHhhhhcccccccc----ccc------------ccccceEEEe
Confidence            578899999999988856555 545788999999887765 5577643221    111            1347999988


Q ss_pred             CCCHHHHHHHHHhcccCCEEEE
Q 017868          263 AGLNKTMSTALGATCAGGKVCL  284 (365)
Q Consensus       263 ~g~~~~~~~~~~~l~~~G~~~~  284 (365)
                      +- +..+...++-+.+.++++.
T Consensus        65 vk-P~~~~~v~~~l~~~~~~vi   85 (152)
T d1yqga2          65 VK-PQDMEAACKNIRTNGALVL   85 (152)
T ss_dssp             SC-HHHHHHHHTTCCCTTCEEE
T ss_pred             cC-HHHHHHhHHHHhhcccEEe
Confidence            86 4566666666666655443

>d1p77a1 c.2.1.7 (A:102-272) Shikimate 5-dehydrogenase AroE {Haemophilus influenzae [TaxId: 727]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Aminoacid dehydrogenase-like, C-terminal domain
domain: Shikimate 5-dehydrogenase AroE
species: Haemophilus influenzae [TaxId: 727]

Probab=94.90  E-value=0.048  Score=41.46  Aligned_cols=117  Identities=16%  Similarity=0.109  Sum_probs=64.4

Q ss_pred             CCCCCEEEEEcCCHHHHHHHHHHHHHCCCCeEEEEeCChhHHHHH-HHcCCC-EEEeCCCCcccHHHHHHHHHHHhCCCc
Q 017868          179 IGPETNVLIMGAGPIGLVTMLGAPRAFGAPRIVIVDVDDYRLSVA-KEIGAD-NIVKVSTNLQDIAEEVEKIQKAMGTGI  256 (365)
Q Consensus       179 ~~~g~~vlI~G~g~~G~~ai~~l~~~~g~~~vi~v~~~~~~~~~~-~~~g~~-~~~~~~~~~~~~~~~i~~~~~~~~~~~  256 (365)
                      ..++.+|+|.|+|+.+.+++. .+...+ ..+..+.++.++.+.+ +.++.. .+.....+..            .-..+
T Consensus        15 ~~~~k~vlIlGaGGaarai~~-aL~~~~-~~i~I~nR~~~~a~~l~~~~~~~~~~~~~~~~~~------------~~~~~   80 (171)
T d1p77a1          15 LRPNQHVLILGAGGATKGVLL-PLLQAQ-QNIVLANRTFSKTKELAERFQPYGNIQAVSMDSI------------PLQTY   80 (171)
T ss_dssp             CCTTCEEEEECCSHHHHTTHH-HHHHTT-CEEEEEESSHHHHHHHHHHHGGGSCEEEEEGGGC------------CCSCC
T ss_pred             CCCCCEEEEECCcHHHHHHHH-HHcccC-ceeeeccchHHHHHHHHHHHhhccccchhhhccc------------ccccc
Confidence            347889999999999999988 555544 5788888888876644 545421 1111111100            13579


Q ss_pred             eEEEeCCCCHHHHH---HHHHhcccCCEEEEEccCCCCccccchHhhhcCc-EEE-ee
Q 017868          257 DVSFDCAGLNKTMS---TALGATCAGGKVCLVGMGHHEMTVPLTPAAVREV-DVV-GV  309 (365)
Q Consensus       257 d~vid~~g~~~~~~---~~~~~l~~~G~~~~~g~~~~~~~~~~~~~~~~~~-~i~-~~  309 (365)
                      |++|+|+.....-.   .....++++..++.+-...+..+.+....-.++. ++. |.
T Consensus        81 diiIN~tp~g~~~~~~~~~~~~~~~~~~~~D~vy~~p~~T~~l~~A~~~g~~~v~~Gl  138 (171)
T d1p77a1          81 DLVINATSAGLSGGTASVDAEILKLGSAFYDMQYAKGTDTPFIALCKSLGLTNVSDGF  138 (171)
T ss_dssp             SEEEECCCC-------CCCHHHHHHCSCEEESCCCTTSCCHHHHHHHHTTCCCEECSH
T ss_pred             ceeeecccccccccccchhhhhhcccceeeeeeccCcccHHHHHHHHHcCCCcccCcH
Confidence            99999987532111   1223455566665554322322333343443443 454 44

>d1cf2o1 c.2.1.3 (O:1-138,O:304-336) Glyceraldehyde-3-phosphate dehydrogenase (GAPDH) {Archaeon Methanothermus fervidus [TaxId: 2180]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Glyceraldehyde-3-phosphate dehydrogenase-like, N-terminal domain
domain: Glyceraldehyde-3-phosphate dehydrogenase (GAPDH)
species: Archaeon Methanothermus fervidus [TaxId: 2180]

Probab=94.79  E-value=0.13  Score=38.87  Aligned_cols=100  Identities=18%  Similarity=0.197  Sum_probs=59.6

Q ss_pred             EEEEEcCCHHHHHHHHHHHHHCCCCeEEEE-eCC-hhHHHHHHHcCCCEEEeCCCCcccHHH-------HHHHHHHHhCC
Q 017868          184 NVLIMGAGPIGLVTMLGAPRAFGAPRIVIV-DVD-DYRLSVAKEIGADNIVKVSTNLQDIAE-------EVEKIQKAMGT  254 (365)
Q Consensus       184 ~vlI~G~g~~G~~ai~~l~~~~g~~~vi~v-~~~-~~~~~~~~~~g~~~~~~~~~~~~~~~~-------~i~~~~~~~~~  254 (365)
                      +|.|.|-|-+|..++.+++..-.. .++++ +.+ ......+..++.+......+....+.+       .+...    -.
T Consensus         3 ~VgINGfGRIGR~v~R~l~~~~di-~vvaInd~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~v~g~~~~~----~~   77 (171)
T d1cf2o1           3 AVAINGYGTVGKRVADAIAQQDDM-KVIGVSKTRPDFEARMALKKGYDLYVAIPERVKLFEKAGIEVAGTVDDM----LD   77 (171)
T ss_dssp             EEEEECCSHHHHHHHHHHHTSSSE-EEEEEEESSCSHHHHHHHHTTCCEEESSGGGHHHHHHTTCCCCEEHHHH----HH
T ss_pred             EEEEEcCcHHHHHHHHHHHhCCCc-eEEEEecCCcHHHHHHHHhcCCceEecccccceeecccCcccCCChhHh----hc
Confidence            678899999999999944444335 34444 333 344556666676543332111111100       01111    13


Q ss_pred             CceEEEeCCCCHHHHHHHHHhcccCCEEEEEccC
Q 017868          255 GIDVSFDCAGLNKTMSTALGATCAGGKVCLVGMG  288 (365)
Q Consensus       255 ~~d~vid~~g~~~~~~~~~~~l~~~G~~~~~g~~  288 (365)
                      ++|+|+||+|.-.....+-.++..+-+.+..+..
T Consensus        78 ~vDvViEcTG~f~~~~~~~~hl~~G~K~vi~~~~  111 (171)
T d1cf2o1          78 EADIVIDCTPEGIGAKNLKMYKEKGIKAIFQGGE  111 (171)
T ss_dssp             TCSEEEECCSTTHHHHHHHHHHHTTCEEEECTTS
T ss_pred             CCCEEEEccCCCCCHHHHHHHHHcCCCEEEECCC
Confidence            6999999999876667777888888777766543

>d1li4a1 c.2.1.4 (A:190-352) S-adenosylhomocystein hydrolase {Human (Homo sapiens) [TaxId: 9606]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Formate/glycerate dehydrogenases, NAD-domain
domain: S-adenosylhomocystein hydrolase
species: Human (Homo sapiens) [TaxId: 9606]

Probab=94.73  E-value=0.079  Score=39.58  Aligned_cols=101  Identities=18%  Similarity=0.249  Sum_probs=69.0

Q ss_pred             HHHHH-Hh-cCCCCCCEEEEEcCCHHHHHHHHHHHHHCCCCeEEEEeCChhHHHHHHHcCCCEEEeCCCCcccHHHHHHH
Q 017868          170 GLHAC-RR-ANIGPETNVLIMGAGPIGLVTMLGAPRAFGAPRIVIVDVDDYRLSVAKEIGADNIVKVSTNLQDIAEEVEK  247 (365)
Q Consensus       170 a~~~~-~~-~~~~~g~~vlI~G~g~~G~~ai~~l~~~~g~~~vi~v~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~i~~  247 (365)
                      .+.++ +. .-.-.|++++|.|-|-+|...++ .++.+|+ +|++++.++-+.-.+.--|.. +.       .    +.+
T Consensus        10 ~~~~~~r~t~~~l~Gk~v~V~GyG~iG~g~A~-~~rg~G~-~V~v~e~dp~~al~A~~dG~~-v~-------~----~~~   75 (163)
T d1li4a1          10 LIDGIKRATDVMIAGKVAVVAGYGDVGKGCAQ-ALRGFGA-RVIITEIDPINALQAAMEGYE-VT-------T----MDE   75 (163)
T ss_dssp             HHHHHHHHHCCCCTTCEEEEECCSHHHHHHHH-HHHHTTC-EEEEECSCHHHHHHHHHTTCE-EC-------C----HHH
T ss_pred             HHHHHHHHhCceecCCEEEEeccccccHHHHH-HHHhCCC-eeEeeecccchhHHhhcCceE-ee-------e----hhh
Confidence            34444 33 33568999999999999999999 8899999 789998877654333333432 22       1    111


Q ss_pred             HHHHhCCCceEEEeCCCCHH-HHHHHHHhcccCCEEEEEccC
Q 017868          248 IQKAMGTGIDVSFDCAGLNK-TMSTALGATCAGGKVCLVGMG  288 (365)
Q Consensus       248 ~~~~~~~~~d~vid~~g~~~-~~~~~~~~l~~~G~~~~~g~~  288 (365)
                      .    -...|+++-++|... .-..-++.|+++..+...|..
T Consensus        76 a----~~~adivvtaTGn~~vI~~eh~~~MKdgaIL~N~Ghf  113 (163)
T d1li4a1          76 A----CQEGNIFVTTTGCIDIILGRHFEQMKDDAIVCNIGHF  113 (163)
T ss_dssp             H----TTTCSEEEECSSCSCSBCHHHHTTCCTTEEEEECSSS
T ss_pred             h----hhhccEEEecCCCccchhHHHHHhccCCeEEEEeccc
Confidence            1    356899999999743 223667888887777776643

>d1c1da1 c.2.1.7 (A:149-349) Phenylalanine dehydrogenase {Rhodococcus sp., M4 [TaxId: 1831]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Aminoacid dehydrogenase-like, C-terminal domain
domain: Phenylalanine dehydrogenase
species: Rhodococcus sp., M4 [TaxId: 1831]

Probab=94.61  E-value=0.043  Score=42.89  Aligned_cols=69  Identities=28%  Similarity=0.381  Sum_probs=52.7

Q ss_pred             CCCCEEEEEcCCHHHHHHHHHHHHHCCCCeEEEEeCChhHHHHHHHcCCCEEEeCCCCcccHHHHHHHHHHHhCCCceEE
Q 017868          180 GPETNVLIMGAGPIGLVTMLGAPRAFGAPRIVIVDVDDYRLSVAKEIGADNIVKVSTNLQDIAEEVEKIQKAMGTGIDVS  259 (365)
Q Consensus       180 ~~g~~vlI~G~g~~G~~ai~~l~~~~g~~~vi~v~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~i~~~~~~~~~~~d~v  259 (365)
                      -.|.+|+|.|.|.+|..+++ ++...|+ ++++++.+.++.+....+|...+ .    .+++          .....|+.
T Consensus        25 L~gk~v~IqG~G~VG~~~A~-~L~~~Ga-kvvv~d~d~~~~~~~~~~g~~~~-~----~~~~----------~~~~~DI~   87 (201)
T d1c1da1          25 LDGLTVLVQGLGAVGGSLAS-LAAEAGA-QLLVADTDTERVAHAVALGHTAV-A----LEDV----------LSTPCDVF   87 (201)
T ss_dssp             STTCEEEEECCSHHHHHHHH-HHHHTTC-EEEEECSCHHHHHHHHHTTCEEC-C----GGGG----------GGCCCSEE
T ss_pred             CCCCEEEEECCCHHHHHHHH-HHHHCCC-EEEEecchHHHHHHHHhhccccc-C----cccc----------ccccceee
Confidence            37899999999999999999 7778899 68888998899888888887542 1    1121          14678988


Q ss_pred             EeCCCC
Q 017868          260 FDCAGL  265 (365)
Q Consensus       260 id~~g~  265 (365)
                      +=|...
T Consensus        88 iPcA~~   93 (201)
T d1c1da1          88 APCAMG   93 (201)
T ss_dssp             EECSCS
T ss_pred             eccccc
Confidence            866553

>d2o23a1 c.2.1.2 (A:6-253) Type II 3-hydroxyacyl-CoA dehydrogenase {Human (Homo sapiens) [TaxId: 9606]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Tyrosine-dependent oxidoreductases
domain: Type II 3-hydroxyacyl-CoA dehydrogenase
species: Human (Homo sapiens) [TaxId: 9606]

Probab=94.57  E-value=0.11  Score=41.96  Aligned_cols=47  Identities=26%  Similarity=0.329  Sum_probs=36.1

Q ss_pred             CCCEEEEEcC-CHHHHHHHHHHHHHCCCCeEEEEeCChhHHH-HHHHcCCC
Q 017868          181 PETNVLIMGA-GPIGLVTMLGAPRAFGAPRIVIVDVDDYRLS-VAKEIGAD  229 (365)
Q Consensus       181 ~g~~vlI~G~-g~~G~~ai~~l~~~~g~~~vi~v~~~~~~~~-~~~~~g~~  229 (365)
                      +|+.+||+|+ +++|.++++.++ ..|+ +|+.+++++++.+ .+++++..
T Consensus         4 kGKvalITGas~GIG~aia~~la-~~G~-~V~~~~r~~~~~~~~~~~l~~~   52 (248)
T d2o23a1           4 KGLVAVITGGASGLGLATAERLV-GQGA-SAVLLDLPNSGGEAQAKKLGNN   52 (248)
T ss_dssp             TTCEEEEETTTSHHHHHHHHHHH-HTTC-EEEEEECTTSSHHHHHHHHCTT
T ss_pred             CCCEEEEeCCCCHHHHHHHHHHH-HCCC-EEEEEeCChHHHHHHHHHhCCC
Confidence            6889999987 999999999554 5699 5777777776654 55667654

>d1zx0a1 c.66.1.16 (A:8-236) Guanidinoacetate methyltransferase {Human (Homo sapiens) [TaxId: 9606]}

class: Alpha and beta proteins (a/b)
fold: S-adenosyl-L-methionine-dependent methyltransferases
superfamily: S-adenosyl-L-methionine-dependent methyltransferases
family: Guanidinoacetate methyltransferase
domain: Guanidinoacetate methyltransferase
species: Human (Homo sapiens) [TaxId: 9606]

Probab=94.49  E-value=0.0094  Score=48.02  Aligned_cols=97  Identities=14%  Similarity=0.106  Sum_probs=60.4

Q ss_pred             CCCCEEEEEcCCHHHHHHHHHHHHHCCCCeEEEEeCChhHHHHHHHcCCC---EEEeCCCCcccHHHHHHHHHHHhCCCc
Q 017868          180 GPETNVLIMGAGPIGLVTMLGAPRAFGAPRIVIVDVDDYRLSVAKEIGAD---NIVKVSTNLQDIAEEVEKIQKAMGTGI  256 (365)
Q Consensus       180 ~~g~~vlI~G~g~~G~~ai~~l~~~~g~~~vi~v~~~~~~~~~~~~~g~~---~~~~~~~~~~~~~~~i~~~~~~~~~~~  256 (365)
                      .+|.+||-+|+|. |..+.. +++..+. .+++++.++...+.+++....   .+....   .+.......   ...+.+
T Consensus        52 ~~g~~VLdIGcG~-G~~a~~-~a~~~~~-~v~~id~s~~~~~~a~~~~~~~~~~~~~~~---~~~~~~~~~---~~~~~f  122 (229)
T d1zx0a1          52 SKGGRVLEVGFGM-AIAASK-VQEAPID-EHWIIECNDGVFQRLRDWAPRQTHKVIPLK---GLWEDVAPT---LPDGHF  122 (229)
T ss_dssp             TTCEEEEEECCTT-SHHHHH-HHTSCEE-EEEEEECCHHHHHHHHHHGGGCSSEEEEEE---SCHHHHGGG---SCTTCE
T ss_pred             cCCCeEEEeeccc-hHHHHH-HHHcCCC-eEEEeCCCHHHHHHHHHHhhhccccccccc---ccccccccc---cccccc
Confidence            6789999998864 666777 6665444 789999999988887664321   111111   121111111   124678


Q ss_pred             eEEE-eCCCC----------HHHHHHHHHhcccCCEEEEE
Q 017868          257 DVSF-DCAGL----------NKTMSTALGATCAGGKVCLV  285 (365)
Q Consensus       257 d~vi-d~~g~----------~~~~~~~~~~l~~~G~~~~~  285 (365)
                      |.++ |++..          ...+..+.++|++||.++..
T Consensus       123 D~i~fD~~~~~~~~~~~~~~~~~~~~~~r~LkpGG~~~~~  162 (229)
T d1zx0a1         123 DGILYDTYPLSEETWHTHQFNFIKNHAFRLLKPGGVLTYC  162 (229)
T ss_dssp             EEEEECCCCCBGGGTTTHHHHHHHHTHHHHEEEEEEEEEC
T ss_pred             cceeecccccccccccccCHHHHHHHHHHHcCCCcEEEEE
Confidence            8884 54432          12445688899999999865

>d1g8aa_ c.66.1.3 (A:) Fibrillarin homologue {Archaeon Pyrococcus horikoshii [TaxId: 53953]}

class: Alpha and beta proteins (a/b)
fold: S-adenosyl-L-methionine-dependent methyltransferases
superfamily: S-adenosyl-L-methionine-dependent methyltransferases
family: Fibrillarin homologue
domain: Fibrillarin homologue
species: Archaeon Pyrococcus horikoshii [TaxId: 53953]

Probab=94.44  E-value=0.064  Score=42.81  Aligned_cols=102  Identities=17%  Similarity=0.125  Sum_probs=64.2

Q ss_pred             HhcCCCCCCEEEEEcCCHHHHHHHHHHHHHCCC-CeEEEEeCChhHHHHHHHc----CCCEEEeCCCCcccHHHHHHHHH
Q 017868          175 RRANIGPETNVLIMGAGPIGLVTMLGAPRAFGA-PRIVIVDVDDYRLSVAKEI----GADNIVKVSTNLQDIAEEVEKIQ  249 (365)
Q Consensus       175 ~~~~~~~g~~vlI~G~g~~G~~ai~~l~~~~g~-~~vi~v~~~~~~~~~~~~~----g~~~~~~~~~~~~~~~~~i~~~~  249 (365)
                      +...++||++||=.|+|. |..+.. +++..|. .+|++++.+++..+.+++.    +....+..+......   ..   
T Consensus        67 ~~l~i~pG~~VLDlGaGs-G~~t~~-la~~VG~~G~V~aVD~s~~~l~~a~~~a~~~~~~~~i~~d~~~~~~---~~---  138 (227)
T d1g8aa_          67 KNFPIKPGKSVLYLGIAS-GTTASH-VSDIVGWEGKIFGIEFSPRVLRELVPIVEERRNIVPILGDATKPEE---YR---  138 (227)
T ss_dssp             CCCCCCTTCEEEEETTTS-TTHHHH-HHHHHCTTSEEEEEESCHHHHHHHHHHHSSCTTEEEEECCTTCGGG---GT---
T ss_pred             cccccCCCCEEEEeccCC-CHHHHH-HHHHhCCCCEEEEEeCcHHHHHHHHHHHHhcCCceEEEEECCCccc---cc---
Confidence            456789999999998754 666666 7777663 3899999999876655432    322233322221111   10   


Q ss_pred             HHhCCCceEEEeCCCCH----HHHHHHHHhcccCCEEEEE
Q 017868          250 KAMGTGIDVSFDCAGLN----KTMSTALGATCAGGKVCLV  285 (365)
Q Consensus       250 ~~~~~~~d~vid~~g~~----~~~~~~~~~l~~~G~~~~~  285 (365)
                       .....+|+++..+...    ..+..+...|+++|.+++.
T Consensus       139 -~~~~~vD~i~~d~~~~~~~~~~l~~~~~~LkpgG~lvi~  177 (227)
T d1g8aa_         139 -ALVPKVDVIFEDVAQPTQAKILIDNAEVYLKRGGYGMIA  177 (227)
T ss_dssp             -TTCCCEEEEEECCCSTTHHHHHHHHHHHHEEEEEEEEEE
T ss_pred             -ccccceEEEEEEccccchHHHHHHHHHHhcccCCeEEEE
Confidence             0135788887644322    2466778899999998764

>d1b7go1 c.2.1.3 (O:1-138,O:301-340) Glyceraldehyde-3-phosphate dehydrogenase (GAPDH) {Archaeon Sulfolobus solfataricus [TaxId: 2287]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Glyceraldehyde-3-phosphate dehydrogenase-like, N-terminal domain
domain: Glyceraldehyde-3-phosphate dehydrogenase (GAPDH)
species: Archaeon Sulfolobus solfataricus [TaxId: 2287]

Probab=94.41  E-value=0.078  Score=40.48  Aligned_cols=95  Identities=20%  Similarity=0.113  Sum_probs=55.6

Q ss_pred             EEEEEcCCHHHHHHHHHHHHHCCCCeEEEE-eCCh-hHHHHHHHcCCCEEEeCCCCcccHHH----------HHHHHHHH
Q 017868          184 NVLIMGAGPIGLVTMLGAPRAFGAPRIVIV-DVDD-YRLSVAKEIGADNIVKVSTNLQDIAE----------EVEKIQKA  251 (365)
Q Consensus       184 ~vlI~G~g~~G~~ai~~l~~~~g~~~vi~v-~~~~-~~~~~~~~~g~~~~~~~~~~~~~~~~----------~i~~~~~~  251 (365)
                      +|.|.|.|-+|..++..+...-..+ ++++ +..+ .....+...+.......    +....          .+...   
T Consensus         3 KVaINGfGRIGR~v~Ral~~~~die-vVaInd~~~~~~~~~~~~~~~~~~~~~----~~~~~~~~~~i~v~g~~~~~---   74 (178)
T d1b7go1           3 NVAVNGYGTIGKRVADAIIKQPDMK-LVGVAKTSPNYEAFIAHRRGIRIYVPQ----QSIKKFEESGIPVAGTVEDL---   74 (178)
T ss_dssp             EEEEECCSHHHHHHHHHHHTCTTEE-EEEEECSSCSHHHHHHHHTTCCEECCG----GGHHHHHTTTCCCCCCHHHH---
T ss_pred             EEEEECCCHHHHHHHHHHHhCCCCE-EEEEECCCCcHHHHHhcccCcceeccC----ccceeccccceecCCchhhh---
Confidence            5789999999999999555444564 5554 4333 33444444454332111    11000          01111   


Q ss_pred             hCCCceEEEeCCCCHHHHHHHHHhcccCCEEEEEcc
Q 017868          252 MGTGIDVSFDCAGLNKTMSTALGATCAGGKVCLVGM  287 (365)
Q Consensus       252 ~~~~~d~vid~~g~~~~~~~~~~~l~~~G~~~~~g~  287 (365)
                       ..++|+|+||+|.....+.+-.++..+-+.++.+.
T Consensus        75 -~~~vDiViecTG~f~~~e~a~~hl~~G~KvIi~~~  109 (178)
T d1b7go1          75 -IKTSDIVVDTTPNGVGAQYKPIYLQLQRNAIFQGG  109 (178)
T ss_dssp             -HHHCSEEEECCSTTHHHHHHHHHHHTTCEEEECTT
T ss_pred             -hhcCCEEEECCCCcCCHHHHHHHHHcCCEEEEECC
Confidence             13689999999986666777777876666666544

>d1ve3a1 c.66.1.43 (A:2-227) Hypothetical protein PH0226 {Archaeon Pyrococcus horikoshii [TaxId: 53953]}

class: Alpha and beta proteins (a/b)
fold: S-adenosyl-L-methionine-dependent methyltransferases
superfamily: S-adenosyl-L-methionine-dependent methyltransferases
family: CAC2371-like
domain: Hypothetical protein PH0226
species: Archaeon Pyrococcus horikoshii [TaxId: 53953]

Probab=94.32  E-value=0.19  Score=39.38  Aligned_cols=95  Identities=16%  Similarity=0.147  Sum_probs=61.1

Q ss_pred             CCCCCCEEEEEcCCHHHHHHHHHHHHHCCCCeEEEEeCChhHHHHHHH----cCCCEEEeCCCCcccHHHHHHHHHHHhC
Q 017868          178 NIGPETNVLIMGAGPIGLVTMLGAPRAFGAPRIVIVDVDDYRLSVAKE----IGADNIVKVSTNLQDIAEEVEKIQKAMG  253 (365)
Q Consensus       178 ~~~~g~~vlI~G~g~~G~~ai~~l~~~~g~~~vi~v~~~~~~~~~~~~----~g~~~~~~~~~~~~~~~~~i~~~~~~~~  253 (365)
                      .++++++||-+|+|. |..+.. +++. |. .++++|.+++..+.+++    .+....... .+..++.        ...
T Consensus        34 ~l~~~~~ILDiGcG~-G~~~~~-la~~-~~-~v~giD~S~~~i~~ak~~~~~~~~~~~~~~-~d~~~l~--------~~~  100 (226)
T d1ve3a1          34 YMKKRGKVLDLACGV-GGFSFL-LEDY-GF-EVVGVDISEDMIRKAREYAKSRESNVEFIV-GDARKLS--------FED  100 (226)
T ss_dssp             SCCSCCEEEEETCTT-SHHHHH-HHHT-TC-EEEEEESCHHHHHHHHHHHHHTTCCCEEEE-CCTTSCC--------SCT
T ss_pred             hcCCCCEEEEECCCc-chhhhh-Hhhh-hc-ccccccccccchhhhhhhhccccccccccc-ccccccc--------ccC
Confidence            357889999999865 777777 7764 77 79999999887766543    333222111 1111210        114


Q ss_pred             CCceEEEeCCC-----CH---HHHHHHHHhcccCCEEEEE
Q 017868          254 TGIDVSFDCAG-----LN---KTMSTALGATCAGGKVCLV  285 (365)
Q Consensus       254 ~~~d~vid~~g-----~~---~~~~~~~~~l~~~G~~~~~  285 (365)
                      ..+|+|+....     ..   ..+..+.++|++||++++.
T Consensus       101 ~~fD~I~~~~~l~~~~~~d~~~~l~~i~~~LkpgG~lii~  140 (226)
T d1ve3a1         101 KTFDYVIFIDSIVHFEPLELNQVFKEVRRVLKPSGKFIMY  140 (226)
T ss_dssp             TCEEEEEEESCGGGCCHHHHHHHHHHHHHHEEEEEEEEEE
T ss_pred             cCceEEEEecchhhCChhHHHHHHHHHHHHcCcCcEEEEE
Confidence            67999986433     11   2466788899999998764

>d2as0a2 c.66.1.51 (A:73-396) Hypothetical protein PH1915, middle and C-terminal domains {Archaeon Pyrococcus horikoshii [TaxId: 53953]}

class: Alpha and beta proteins (a/b)
fold: S-adenosyl-L-methionine-dependent methyltransferases
superfamily: S-adenosyl-L-methionine-dependent methyltransferases
family: hypothetical RNA methyltransferase
domain: Hypothetical protein PH1915, middle and C-terminal domains
species: Archaeon Pyrococcus horikoshii [TaxId: 53953]

Probab=94.30  E-value=0.11  Score=43.91  Aligned_cols=104  Identities=22%  Similarity=0.209  Sum_probs=63.1

Q ss_pred             CCCCCCEEEEEcCCHHHHHHHHHHHHHCCCCeEEEEeCChhHHHHH----HHcCCCE-EEeCCCCcccHHHHHHHHHHHh
Q 017868          178 NIGPETNVLIMGAGPIGLVTMLGAPRAFGAPRIVIVDVDDYRLSVA----KEIGADN-IVKVSTNLQDIAEEVEKIQKAM  252 (365)
Q Consensus       178 ~~~~g~~vlI~G~g~~G~~ai~~l~~~~g~~~vi~v~~~~~~~~~~----~~~g~~~-~~~~~~~~~~~~~~i~~~~~~~  252 (365)
                      .+++|++||=.++|. |..++. +++. |+..|++++.+++..+.+    +..|... +....   .|..+.+..+.. .
T Consensus       142 ~~~~g~~VLDl~~g~-G~~si~-~a~~-ga~~V~~vD~s~~al~~a~~N~~~ngl~~~~~~~~---~d~~~~~~~~~~-~  214 (324)
T d2as0a2         142 WVQPGDRVLDVFTYT-GGFAIH-AAIA-GADEVIGIDKSPRAIETAKENAKLNGVEDRMKFIV---GSAFEEMEKLQK-K  214 (324)
T ss_dssp             GCCTTCEEEETTCTT-THHHHH-HHHT-TCSEEEEEESCHHHHHHHHHHHHHTTCGGGEEEEE---SCHHHHHHHHHH-T
T ss_pred             hcCCCCeeecccCcc-cchhhh-hhhc-CCcEEEeecCCHHHHHHHHHHHHHcCCCccceeee---chhhhhhHHHHh-c
Confidence            367899988876532 334444 4433 888899999999877654    3456532 21111   233344433322 3


Q ss_pred             CCCceEEEeCCC---C------------HHHHHHHHHhcccCCEEEEEccC
Q 017868          253 GTGIDVSFDCAG---L------------NKTMSTALGATCAGGKVCLVGMG  288 (365)
Q Consensus       253 ~~~~d~vid~~g---~------------~~~~~~~~~~l~~~G~~~~~g~~  288 (365)
                      +..||+|+--..   .            ...+..++++|+++|.++....+
T Consensus       215 ~~~fD~Vi~DpP~~~~~~~~~~~~~~~y~~l~~~a~~ll~pGG~lv~~s~s  265 (324)
T d2as0a2         215 GEKFDIVVLDPPAFVQHEKDLKAGLRAYFNVNFAGLNLVKDGGILVTCSCS  265 (324)
T ss_dssp             TCCEEEEEECCCCSCSSGGGHHHHHHHHHHHHHHHHTTEEEEEEEEEEECC
T ss_pred             cCCCCchhcCCccccCCHHHHHHHHHHHHHHHHHHHHHcCCCcEEEEEeCC
Confidence            678999985211   1            12455678899999999887543

>d1yl7a1 c.2.1.3 (A:2-105,A:215-245) Dihydrodipicolinate reductase {Mycobacterium tuberculosis [TaxId: 1773]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Glyceraldehyde-3-phosphate dehydrogenase-like, N-terminal domain
domain: Dihydrodipicolinate reductase
species: Mycobacterium tuberculosis [TaxId: 1773]

Probab=94.21  E-value=0.56  Score=33.61  Aligned_cols=31  Identities=23%  Similarity=0.266  Sum_probs=23.1

Q ss_pred             EEEEEcC-CHHHHHHHHHHHHHCCCCeEEEEe
Q 017868          184 NVLIMGA-GPIGLVTMLGAPRAFGAPRIVIVD  214 (365)
Q Consensus       184 ~vlI~G~-g~~G~~ai~~l~~~~g~~~vi~v~  214 (365)
                      +|.|.|+ |-+|+.+++.+.+..+++.+.+++
T Consensus         1 kI~v~Ga~GrMG~~i~~~i~~~~~~~l~~~~d   32 (135)
T d1yl7a1           1 RVGVLGAKGKVGATMVRAVAAADDLTLSAELD   32 (135)
T ss_dssp             EEEEETTTSHHHHHHHHHHHHSTTSEEEEEEC
T ss_pred             CEEEECCCCHHHHHHHHHHHhCCCCEEEEEEe
Confidence            5889997 999999999556666775555554

>d1g8sa_ c.66.1.3 (A:) Fibrillarin homologue {Archaeon Methanococcus jannaschii [TaxId: 2190]}

class: Alpha and beta proteins (a/b)
fold: S-adenosyl-L-methionine-dependent methyltransferases
superfamily: S-adenosyl-L-methionine-dependent methyltransferases
family: Fibrillarin homologue
domain: Fibrillarin homologue
species: Archaeon Methanococcus jannaschii [TaxId: 2190]

Probab=94.20  E-value=0.14  Score=40.86  Aligned_cols=102  Identities=12%  Similarity=0.084  Sum_probs=62.5

Q ss_pred             HhcCCCCCCEEEEEcCCHHHHHHHHHHHHHCCCCeEEEEeCChhHHHHHHHc----CCCEEEeCCCCcccHHHHHHHHHH
Q 017868          175 RRANIGPETNVLIMGAGPIGLVTMLGAPRAFGAPRIVIVDVDDYRLSVAKEI----GADNIVKVSTNLQDIAEEVEKIQK  250 (365)
Q Consensus       175 ~~~~~~~g~~vlI~G~g~~G~~ai~~l~~~~g~~~vi~v~~~~~~~~~~~~~----g~~~~~~~~~~~~~~~~~i~~~~~  250 (365)
                      +...+++|++||=.|+|. |..+.. +++......|++++.+++..+.+++.    +....+..+.....  . ...   
T Consensus        68 ~~l~ikpG~~VLDlGcGs-G~~~~~-la~~~~~g~V~aVDiS~~~i~~a~~~a~~~~ni~~i~~d~~~~~--~-~~~---  139 (230)
T d1g8sa_          68 KVMPIKRDSKILYLGASA-GTTPSH-VADIADKGIVYAIEYAPRIMRELLDACAERENIIPILGDANKPQ--E-YAN---  139 (230)
T ss_dssp             CCCCCCTTCEEEEESCCS-SHHHHH-HHHHTTTSEEEEEESCHHHHHHHHHHTTTCTTEEEEECCTTCGG--G-GTT---
T ss_pred             HhCCCCCCCEEEEeCEEc-CHHHHH-HHHhCCCCEEEEEeCcHHHHHHHHHHHhhhcccceEEEeeccCc--c-ccc---
Confidence            446789999999999854 666666 66664445899999999877766553    22223332221111  1 100   


Q ss_pred             HhCCCceEEEeCCCC----HHHHHHHHHhcccCCEEEEE
Q 017868          251 AMGTGIDVSFDCAGL----NKTMSTALGATCAGGKVCLV  285 (365)
Q Consensus       251 ~~~~~~d~vid~~g~----~~~~~~~~~~l~~~G~~~~~  285 (365)
                       ....+|+++.....    ...+..+...|+++|.+++.
T Consensus       140 -~~~~v~~i~~~~~~~~~~~~~l~~~~r~LKpgG~~~i~  177 (230)
T d1g8sa_         140 -IVEKVDVIYEDVAQPNQAEILIKNAKWFLKKGGYGMIA  177 (230)
T ss_dssp             -TCCCEEEEEECCCSTTHHHHHHHHHHHHEEEEEEEEEE
T ss_pred             -ccceeEEeeccccchHHHHHHHHHHHHhcccCceEEEE
Confidence             12356666665442    22355777889999998765

>d1nvmb1 c.2.1.3 (B:1-131,B:287-312) Acetaldehyde dehydrogenase (acylating) {Pseudomonas sp. [TaxId: 306]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Glyceraldehyde-3-phosphate dehydrogenase-like, N-terminal domain
domain: Acetaldehyde dehydrogenase (acylating)
species: Pseudomonas sp. [TaxId: 306]

Probab=94.16  E-value=0.22  Score=36.93  Aligned_cols=94  Identities=21%  Similarity=0.269  Sum_probs=53.5

Q ss_pred             CEEEEEcCCHHHH-HHHHHHHHHC-CCCeEEEEeCCh--hHHHHHHHcCCCEEEeCCCCcccHHHHHHHHHHHhCCCceE
Q 017868          183 TNVLIMGAGPIGL-VTMLGAPRAF-GAPRIVIVDVDD--YRLSVAKEIGADNIVKVSTNLQDIAEEVEKIQKAMGTGIDV  258 (365)
Q Consensus       183 ~~vlI~G~g~~G~-~ai~~l~~~~-g~~~vi~v~~~~--~~~~~~~~~g~~~~~~~~~~~~~~~~~i~~~~~~~~~~~d~  258 (365)
                      -++.|.|+|.+|. ..++ +.+.. ..+.+.+++++.  ....+++++|.....      .++ +.+.+..  .-.++|+
T Consensus         5 irvaIIGaG~ig~~~~~~-~l~~~~~~el~avas~~~~~~~~~~a~~~~i~~~~------~~~-d~l~~~~--~~~~iDi   74 (157)
T d1nvmb1           5 LKVAIIGSGNIGTDLMIK-VLRNAKYLEMGAMVGIDAASDGLARAQRMGVTTTY------AGV-EGLIKLP--EFADIDF   74 (157)
T ss_dssp             EEEEEECCSHHHHHHHHH-HHHHCSSEEEEEEECSCTTCHHHHHHHHTTCCEES------SHH-HHHHHSG--GGGGEEE
T ss_pred             cEEEEEcCcHHHHHHHHH-HHhhCCcceEEEEEecchhccchhhhhhcCCcccc------cce-eeeeecc--cccccCE
Confidence            4688999999987 5667 54544 443334444444  345678888876432      122 1121111  1247999


Q ss_pred             EEeCCCCHHHHHHH--HHhcccCCEEEEEc
Q 017868          259 SFDCAGLNKTMSTA--LGATCAGGKVCLVG  286 (365)
Q Consensus       259 vid~~g~~~~~~~~--~~~l~~~G~~~~~g  286 (365)
                      ||+++....+..+.  .+.+..|-.++...
T Consensus        75 Vf~ATpag~h~~~~~~~~aa~~G~~VID~s  104 (157)
T d1nvmb1          75 VFDATSASAHVQNEALLRQAKPGIRLIDLT  104 (157)
T ss_dssp             EEECSCHHHHHHHHHHHHHHCTTCEEEECS
T ss_pred             EEEcCCchhHHHhHHHHHHHHcCCEEEEcc
Confidence            99998755555544  33455444555543

>d1oaaa_ c.2.1.2 (A:) Sepiapterin reductase {Mouse (Mus musculus) [TaxId: 10090]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Tyrosine-dependent oxidoreductases
domain: Sepiapterin reductase
species: Mouse (Mus musculus) [TaxId: 10090]

Probab=94.11  E-value=0.082  Score=43.03  Aligned_cols=83  Identities=11%  Similarity=0.098  Sum_probs=48.4

Q ss_pred             CCCEEEEEcC-CHHHHHHHHHHHHH--CCCCeEEEEeCChhHHHHH-HHc----CCCEE--EeCCCCc-ccHHHHHHHHH
Q 017868          181 PETNVLIMGA-GPIGLVTMLGAPRA--FGAPRIVIVDVDDYRLSVA-KEI----GADNI--VKVSTNL-QDIAEEVEKIQ  249 (365)
Q Consensus       181 ~g~~vlI~G~-g~~G~~ai~~l~~~--~g~~~vi~v~~~~~~~~~~-~~~----g~~~~--~~~~~~~-~~~~~~i~~~~  249 (365)
                      .|+.+||+|+ +++|.++++.+++.  .|+ +|+.+++++++.+.+ +++    .-..+  +..+-.+ ++..+.++.+.
T Consensus         5 ~gKvalITGas~GIG~aiA~~lA~~~~~G~-~Vv~~~r~~~~l~~~~~~l~~~~~~~~~~~~~~Dvs~~~~v~~l~~~~~   83 (259)
T d1oaaa_           5 GCAVCVLTGASRGFGRALAPQLARLLSPGS-VMLVSARSESMLRQLKEELGAQQPDLKVVLAAADLGTEAGVQRLLSAVR   83 (259)
T ss_dssp             BSEEEEESSCSSHHHHHHHHHHHTTBCTTC-EEEEEESCHHHHHHHHHHHHHHCTTSEEEEEECCTTSHHHHHHHHHHHH
T ss_pred             CCCEEEEeCCCCHHHHHHHHHHHhcccCCC-EEEEEECCHHHHHHHHHHHHhhcCCceEEEEEccCCCHHHHHHHHHHHH
Confidence            4667788887 89999998867763  588 678888888876543 333    11222  2222222 23333333332


Q ss_pred             HH---hCCCceEEEeCCC
Q 017868          250 KA---MGTGIDVSFDCAG  264 (365)
Q Consensus       250 ~~---~~~~~d~vid~~g  264 (365)
                      +.   .+...|+++.+.|
T Consensus        84 ~~~~~~~~~~~~lvnnag  101 (259)
T d1oaaa_          84 ELPRPEGLQRLLLINNAA  101 (259)
T ss_dssp             HSCCCTTCCEEEEEECCC
T ss_pred             HhhhhccCceEEEEeccc
Confidence            21   2346788888665

>d2jfga1 c.5.1.1 (A:1-93) UDP-N-acetylmuramoyl-L-alanine:D-glutamate ligase MurD {Escherichia coli [TaxId: 562]}

class: Alpha and beta proteins (a/b)
fold: MurCD N-terminal domain
superfamily: MurCD N-terminal domain
family: MurCD N-terminal domain
domain: UDP-N-acetylmuramoyl-L-alanine:D-glutamate ligase MurD
species: Escherichia coli [TaxId: 562]

Probab=94.10  E-value=0.027  Score=38.06  Aligned_cols=35  Identities=29%  Similarity=0.283  Sum_probs=28.3

Q ss_pred             CCCEEEEEcCCHHHHHHHHHHHHHCCCCeEEEEeCCh
Q 017868          181 PETNVLIMGAGPIGLVTMLGAPRAFGAPRIVIVDVDD  217 (365)
Q Consensus       181 ~g~~vlI~G~g~~G~~ai~~l~~~~g~~~vi~v~~~~  217 (365)
                      +|.+|+|+|.|..|+++++ ++...|++ |.+.+..+
T Consensus         4 ~~K~v~ViGlG~sG~s~a~-~L~~~g~~-v~~~D~~~   38 (93)
T d2jfga1           4 QGKNVVIIGLGLTGLSCVD-FFLARGVT-PRVMDTRM   38 (93)
T ss_dssp             TTCCEEEECCSHHHHHHHH-HHHHTTCC-CEEEESSS
T ss_pred             CCCEEEEEeECHHHHHHHH-HHHHCCCE-EEEeeCCc
Confidence            5778999999999999999 66777994 66666543

>d1vpda2 c.2.1.6 (A:3-163) Hydroxyisobutyrate dehydrogenase {Salmonella typhimurium [TaxId: 90371]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: 6-phosphogluconate dehydrogenase-like, N-terminal domain
domain: Hydroxyisobutyrate dehydrogenase
species: Salmonella typhimurium [TaxId: 90371]

Probab=93.83  E-value=0.4  Score=35.56  Aligned_cols=88  Identities=14%  Similarity=0.096  Sum_probs=59.6

Q ss_pred             EEEEEcCCHHHHHHHHHHHHHCCCCeEEEEeCChhHHHHHHHcCCCEEEeCCCCcccHHHHHHHHHHHhCCCceEEEeCC
Q 017868          184 NVLIMGAGPIGLVTMLGAPRAFGAPRIVIVDVDDYRLSVAKEIGADNIVKVSTNLQDIAEEVEKIQKAMGTGIDVSFDCA  263 (365)
Q Consensus       184 ~vlI~G~g~~G~~ai~~l~~~~g~~~vi~v~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~i~~~~~~~~~~~d~vid~~  263 (365)
                      +|-|.|.|.+|..++.-|+ ..|+ .|++.++++++.+.+.+.++...       .+..+.+        ...|++|-|+
T Consensus         2 kIgiIGlG~MG~~~A~~L~-~~G~-~V~~~d~~~~~~~~~~~~~~~~~-------~~~~e~~--------~~~d~ii~~v   64 (161)
T d1vpda2           2 KVGFIGLGIMGKPMSKNLL-KAGY-SLVVSDRNPEAIADVIAAGAETA-------STAKAIA--------EQCDVIITML   64 (161)
T ss_dssp             EEEEECCSTTHHHHHHHHH-HTTC-EEEEECSCHHHHHHHHHTTCEEC-------SSHHHHH--------HHCSEEEECC
T ss_pred             EEEEEehhHHHHHHHHHHH-HCCC-eEEEEeCCcchhHHHHHhhhhhc-------ccHHHHH--------hCCCeEEEEc
Confidence            5788999999998888454 5688 58889999999998888876431       1222221        3579999998


Q ss_pred             CCHHHHHHH-------HHhcccCCEEEEEccC
Q 017868          264 GLNKTMSTA-------LGATCAGGKVCLVGMG  288 (365)
Q Consensus       264 g~~~~~~~~-------~~~l~~~G~~~~~g~~  288 (365)
                      ..+......       ...+.++-.++..+..
T Consensus        65 ~~~~~v~~v~~~~~~~~~~~~~g~iiid~sT~   96 (161)
T d1vpda2          65 PNSPHVKEVALGENGIIEGAKPGTVLIDMSSI   96 (161)
T ss_dssp             SSHHHHHHHHHSTTCHHHHCCTTCEEEECSCC
T ss_pred             CCHHHHHHHHhCCcchhhccCCCCEEEECCCC
Confidence            766555443       3345566666665443

>d2h7ma1 c.2.1.2 (A:2-269) Enoyl-ACP reductase {Mycobacterium tuberculosis, TB, gene InhA [TaxId: 1773]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Tyrosine-dependent oxidoreductases
domain: Enoyl-ACP reductase
species: Mycobacterium tuberculosis, TB, gene InhA [TaxId: 1773]

Probab=93.82  E-value=0.17  Score=41.03  Aligned_cols=84  Identities=19%  Similarity=0.372  Sum_probs=49.4

Q ss_pred             CCCCCEEEEEcC-C--HHHHHHHHHHHHHCCCCeEEEEeCChhHH-H-HHHHcCCCE-EEeCCC-CcccHHHHHHHHHHH
Q 017868          179 IGPETNVLIMGA-G--PIGLVTMLGAPRAFGAPRIVIVDVDDYRL-S-VAKEIGADN-IVKVST-NLQDIAEEVEKIQKA  251 (365)
Q Consensus       179 ~~~g~~vlI~G~-g--~~G~~ai~~l~~~~g~~~vi~v~~~~~~~-~-~~~~~g~~~-~~~~~~-~~~~~~~~i~~~~~~  251 (365)
                      +=+|+++||+|+ |  ++|.++++ .+...|+ +|+.+.++.++. + ..++++... .+..+- +..+..+..+.+.+.
T Consensus         3 ~l~gK~~lItGaag~~GIG~aiA~-~la~~Ga-~Vil~~~~~~~~~~~~~~~~~~~~~~~~~dv~~~~~~~~~~~~v~~~   80 (268)
T d2h7ma1           3 LLDGKRILVSGIITDSSIAFHIAR-VAQEQGA-QLVLTGFDRLRLIQRITDRLPAKAPLLELDVQNEEHLASLAGRVTEA   80 (268)
T ss_dssp             TTTTCEEEECCCSSTTCHHHHHHH-HHHHTTC-EEEEEECSCHHHHHHHHTTSSSCCCEEECCTTCHHHHHHHHHHHHHH
T ss_pred             CCCCCEEEEECCCCCCHHHHHHHH-HHHHcCC-EEEEEeCChHHHHHHHHHHcCCceeeEeeecccccccccccchhhhc
Confidence            346889999984 3  59999988 4456699 466666666553 3 445565422 222222 222333333333322


Q ss_pred             h--CCCceEEEeCCC
Q 017868          252 M--GTGIDVSFDCAG  264 (365)
Q Consensus       252 ~--~~~~d~vid~~g  264 (365)
                      .  .+.+|+++.++|
T Consensus        81 ~~~~~~ld~~i~~ag   95 (268)
T d2h7ma1          81 IGAGNKLDGVVHSIG   95 (268)
T ss_dssp             HCTTCCEEEEEECCC
T ss_pred             cccCCCcceeeeccc
Confidence            2  457899999887

>d1wzna1 c.66.1.43 (A:1-251) Hypothetical methyltransferase PH1305 {Archaeon Pyrococcus horikoshii [TaxId: 53953]}

class: Alpha and beta proteins (a/b)
fold: S-adenosyl-L-methionine-dependent methyltransferases
superfamily: S-adenosyl-L-methionine-dependent methyltransferases
family: CAC2371-like
domain: Hypothetical methyltransferase PH1305
species: Archaeon Pyrococcus horikoshii [TaxId: 53953]

Probab=93.76  E-value=0.19  Score=40.31  Aligned_cols=95  Identities=20%  Similarity=0.230  Sum_probs=63.0

Q ss_pred             HhcCCCCCCEEEEEcCCHHHHHHHHHHHHHCCCCeEEEEeCChhHHHHHHHc----CCC-EEEeCCCCcccHHHHHHHHH
Q 017868          175 RRANIGPETNVLIMGAGPIGLVTMLGAPRAFGAPRIVIVDVDDYRLSVAKEI----GAD-NIVKVSTNLQDIAEEVEKIQ  249 (365)
Q Consensus       175 ~~~~~~~g~~vlI~G~g~~G~~ai~~l~~~~g~~~vi~v~~~~~~~~~~~~~----g~~-~~~~~~~~~~~~~~~i~~~~  249 (365)
                      .....++..+||=.|+|. |..+.. +++ .|+ .+++++.+++-.+.+++.    +.. ..+.  .+..++.       
T Consensus        35 ~~~~~~~~~~iLDiGcGt-G~~~~~-l~~-~~~-~v~gvD~s~~mi~~a~~~~~~~~~~i~~~~--~d~~~l~-------  101 (251)
T d1wzna1          35 KEDAKREVRRVLDLACGT-GIPTLE-LAE-RGY-EVVGLDLHEEMLRVARRKAKERNLKIEFLQ--GDVLEIA-------  101 (251)
T ss_dssp             HHTCSSCCCEEEEETCTT-CHHHHH-HHH-TTC-EEEEEESCHHHHHHHHHHHHHTTCCCEEEE--SCGGGCC-------
T ss_pred             HHhcCCCCCEEEEeCCCC-Cccchh-hcc-cce-EEEEEeeccccccccccccccccccchhee--hhhhhcc-------
Confidence            344567778999999875 777777 765 487 799999999877766543    332 2222  2222210       


Q ss_pred             HHhCCCceEEEeCCCC---------HHHHHHHHHhcccCCEEEE
Q 017868          250 KAMGTGIDVSFDCAGL---------NKTMSTALGATCAGGKVCL  284 (365)
Q Consensus       250 ~~~~~~~d~vid~~g~---------~~~~~~~~~~l~~~G~~~~  284 (365)
                        .+..+|+|+...+.         ...+..+.++|+++|.+++
T Consensus       102 --~~~~fD~I~~~~~~~~~~~~~~~~~~L~~~~~~LkpgG~lii  143 (251)
T d1wzna1         102 --FKNEFDAVTMFFSTIMYFDEEDLRKLFSKVAEALKPGGVFIT  143 (251)
T ss_dssp             --CCSCEEEEEECSSGGGGSCHHHHHHHHHHHHHHEEEEEEEEE
T ss_pred             --cccccchHhhhhhhhhcCChHHHHHHHHHHHHHcCCCcEEEE
Confidence              14689999875331         1356678899999999876

>d1iy9a_ c.66.1.17 (A:) Spermidine synthase {Bacillus subtilis [TaxId: 1423]}

class: Alpha and beta proteins (a/b)
fold: S-adenosyl-L-methionine-dependent methyltransferases
superfamily: S-adenosyl-L-methionine-dependent methyltransferases
family: Spermidine synthase
domain: Spermidine synthase
species: Bacillus subtilis [TaxId: 1423]

Probab=93.74  E-value=0.17  Score=41.49  Aligned_cols=96  Identities=17%  Similarity=0.133  Sum_probs=64.2

Q ss_pred             CCCCEEEEEcCCHHHHHHHHHHHHHCCCCeEEEEeCChhHHHHHHHcC-----C----C-EEEeCCCCcccHHHHHHHHH
Q 017868          180 GPETNVLIMGAGPIGLVTMLGAPRAFGAPRIVIVDVDDYRLSVAKEIG-----A----D-NIVKVSTNLQDIAEEVEKIQ  249 (365)
Q Consensus       180 ~~g~~vlI~G~g~~G~~ai~~l~~~~g~~~vi~v~~~~~~~~~~~~~g-----~----~-~~~~~~~~~~~~~~~i~~~~  249 (365)
                      ...++|||.|+|. |..+.. +++..+.+.+..++-+++-.+.++++-     +    . .++.     .|....+++  
T Consensus        74 ~~p~~vLiiGgG~-G~~~~~-~l~~~~~~~i~~VEID~~Vi~~a~~~~~~~~~~~~d~r~~i~~-----~D~~~~l~~--  144 (274)
T d1iy9a_          74 PNPEHVLVVGGGD-GGVIRE-ILKHPSVKKATLVDIDGKVIEYSKKFLPSIAGKLDDPRVDVQV-----DDGFMHIAK--  144 (274)
T ss_dssp             SSCCEEEEESCTT-CHHHHH-HTTCTTCSEEEEEESCHHHHHHHHHHCHHHHTTTTSTTEEEEE-----SCSHHHHHT--
T ss_pred             CCcceEEecCCCC-cHHHHH-HHhcCCcceEEEecCCHHHHHHHHHhChhhcccccCCCeEEEe-----chHHHHHhh--
Confidence            4457999998754 445555 556777779999999999888887752     1    1 1222     233333432  


Q ss_pred             HHhCCCceEEEe-CCC---------CHHHHHHHHHhcccCCEEEEEc
Q 017868          250 KAMGTGIDVSFD-CAG---------LNKTMSTALGATCAGGKVCLVG  286 (365)
Q Consensus       250 ~~~~~~~d~vid-~~g---------~~~~~~~~~~~l~~~G~~~~~g  286 (365)
                        ....+|+||- ...         +.+-++.+.++|+++|.++...
T Consensus       145 --~~~~yDvIi~D~~~p~~~~~~L~t~eFy~~~~~~L~~~Gv~v~q~  189 (274)
T d1iy9a_         145 --SENQYDVIMVDSTEPVGPAVNLFTKGFYAGIAKALKEDGIFVAQT  189 (274)
T ss_dssp             --CCSCEEEEEESCSSCCSCCCCCSTTHHHHHHHHHEEEEEEEEEEC
T ss_pred             --cCCCCCEEEEcCCCCCCcchhhccHHHHHHHHhhcCCCceEEEec
Confidence              3678999964 221         3356778889999999999874

>d2q46a1 c.2.1.2 (A:2-253) Hypothetical protein At5g02240 (T7H20_290) {Thale cress (Arabidopsis thaliana) [TaxId: 3702]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Tyrosine-dependent oxidoreductases
domain: Hypothetical protein At5g02240 (T7H20 290)
species: Thale cress (Arabidopsis thaliana) [TaxId: 3702]

Probab=93.68  E-value=0.11  Score=41.05  Aligned_cols=72  Identities=17%  Similarity=0.075  Sum_probs=42.6

Q ss_pred             CEEEEEcC-CHHHHHHHHHHHHHCCCC-eEEEEeCChhHHHHHHHcCCCEEEeCCCCcccHHHHHHHHHHHhCCCceEEE
Q 017868          183 TNVLIMGA-GPIGLVTMLGAPRAFGAP-RIVIVDVDDYRLSVAKEIGADNIVKVSTNLQDIAEEVEKIQKAMGTGIDVSF  260 (365)
Q Consensus       183 ~~vlI~G~-g~~G~~ai~~l~~~~g~~-~vi~v~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~i~~~~~~~~~~~d~vi  260 (365)
                      .+|||+|+ |.+|..++..| ...|.+ .++...+++++.+.... +... +..+.  .+... +.+..    .++|.|+
T Consensus         4 ~tVlVtGatG~iG~~l~~~L-l~~g~~v~v~~~~R~~~~~~~~~~-~~~~-~~~d~--~~~~~-~~~~~----~~~d~vi   73 (252)
T d2q46a1           4 PTVLVTGASGRTGQIVYKKL-KEGSDKFVAKGLVRSAQGKEKIGG-EADV-FIGDI--TDADS-INPAF----QGIDALV   73 (252)
T ss_dssp             CEEEEESTTSTTHHHHHHHH-HHTTTTCEEEEEESCHHHHHHTTC-CTTE-EECCT--TSHHH-HHHHH----TTCSEEE
T ss_pred             CEEEEECCccHHHHHHHHHH-HHCCCcEEEEEEcCCHHHHHhccC-CcEE-EEeee--ccccc-ccccc----ccceeeE
Confidence            58999987 99999999945 455764 35556677666543321 2332 22221  23222 22221    4789999


Q ss_pred             eCCC
Q 017868          261 DCAG  264 (365)
Q Consensus       261 d~~g  264 (365)
                      .+.+
T Consensus        74 ~~a~   77 (252)
T d2q46a1          74 ILTS   77 (252)
T ss_dssp             ECCC
T ss_pred             EEEe
Confidence            8765

>d1jbqa_ c.79.1.1 (A:) Cystathionine beta-synthase {Human (Homo sapiens) [TaxId: 9606]}

class: Alpha and beta proteins (a/b)
fold: Tryptophan synthase beta subunit-like PLP-dependent enzymes
superfamily: Tryptophan synthase beta subunit-like PLP-dependent enzymes
family: Tryptophan synthase beta subunit-like PLP-dependent enzymes
domain: Cystathionine beta-synthase
species: Human (Homo sapiens) [TaxId: 9606]

Probab=93.62  E-value=1.2  Score=37.65  Aligned_cols=111  Identities=18%  Similarity=0.332  Sum_probs=72.3

Q ss_pred             HhcCCCCCCEEEEEcCCHHHHHHHHHHHHHCCCCeEEEEe--CChhHHHHHHHcCCCEEEeCCC----------------
Q 017868          175 RRANIGPETNVLIMGAGPIGLVTMLGAPRAFGAPRIVIVD--VDDYRLSVAKEIGADNIVKVST----------------  236 (365)
Q Consensus       175 ~~~~~~~g~~vlI~G~g~~G~~ai~~l~~~~g~~~vi~v~--~~~~~~~~~~~~g~~~~~~~~~----------------  236 (365)
                      +...+++++.|+...+|..|.+++. +++.+|.+.++++.  .+++|.+.++.+|+.-+.....                
T Consensus        90 ~~g~~~~~~~vv~aSsGN~g~a~A~-~a~~~Gi~~~iv~p~~~~~~k~~~i~~~GA~vv~v~~~~~~~~~~~~~~~~~~~  168 (355)
T d1jbqa_          90 RDGTLKPGDTIIEPTSGNTGIGLAL-AAAVRGYRCIIVMPEKMSSEKVDVLRALGAEIVRTPTNARFDSPESHVGVAWRL  168 (355)
T ss_dssp             HHTCSCTTCEEEEECSSHHHHHHHH-HHHHHTCEEEEEECSCCCHHHHHHHHHTTCEEEECCC-------CCHHHHHHHH
T ss_pred             HcCCcccCceEEEecccchhhHHHH-HHHhccCCeEEEeeccchHHHHHHHHhcCCeEEEecccccchhhhhhhhHHHHH
Confidence            4566777777666677999999999 99999997776663  3457888999999975432100                


Q ss_pred             --------------Ccc----cHHHHHHHHHHHhCCCceEEEeCCCCHHHHH---HHHHhcccCCEEEEEc
Q 017868          237 --------------NLQ----DIAEEVEKIQKAMGTGIDVSFDCAGLNKTMS---TALGATCAGGKVCLVG  286 (365)
Q Consensus       237 --------------~~~----~~~~~i~~~~~~~~~~~d~vid~~g~~~~~~---~~~~~l~~~G~~~~~g  286 (365)
                                    +..    .+.....++.+..+..+|.++-++|+..++.   ..++...+.-+++.+.
T Consensus       169 ~~~~~~~~~~~~~~~~~~~~ag~~t~~~EI~~ql~~~~d~vv~~vG~GG~~~Gi~~~lk~~~~~~kii~ve  239 (355)
T d1jbqa_         169 KNEIPNSHILDQYRNASNPLAHYDTTADEILQQCDGKLDMLVASVGTGGTITGIARKLKEKCPGCRIIGVD  239 (355)
T ss_dssp             HHHSTTEECCCTTTCTHHHHHHHHTHHHHHHHHHTTCCCEEEEECSSSHHHHHHHHHHHHHCTTCEEEEEE
T ss_pred             HHhccccccccccCcccchhhhcccchhhhhhhcCCCCCeeEecccCCchHHHHHHHHhhcCCcceEEeec
Confidence                          000    0111122333333567899999999765544   4555566677777664

>d1ldna1 c.2.1.5 (A:15-162) Lactate dehydrogenase {Bacillus stearothermophilus [TaxId: 1422]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: LDH N-terminal domain-like
domain: Lactate dehydrogenase
species: Bacillus stearothermophilus [TaxId: 1422]

Probab=93.59  E-value=0.44  Score=34.84  Aligned_cols=40  Identities=23%  Similarity=0.367  Sum_probs=30.7

Q ss_pred             CCCCEEEEEcCCHHHHHHHHHHHHHCCCCeEEEEeCChhH
Q 017868          180 GPETNVLIMGAGPIGLVTMLGAPRAFGAPRIVIVDVDDYR  219 (365)
Q Consensus       180 ~~g~~vlI~G~g~~G~~ai~~l~~~~g~~~vi~v~~~~~~  219 (365)
                      ..+.+|.|.|+|.+|...+..++..--+..++.+|..+++
T Consensus         4 ~~~~KI~IiGaG~vG~~~a~~l~~~~l~~el~L~Di~~~~   43 (148)
T d1ldna1           4 NGGARVVVIGAGFVGASYVFALMNQGIADEIVLIDANESK   43 (148)
T ss_dssp             TTSCEEEEECCSHHHHHHHHHHHHHTCCSEEEEECSSHHH
T ss_pred             CCCCeEEEECcCHHHHHHHHHHHhcCCCceEEEEeecccc
Confidence            3567899999999999888855544335578899988876

>d1ydwa1 c.2.1.3 (A:6-133,A:305-360) Probable oxidoreductase At4g09670 {Thale cress (Arabidopsis thaliana) [TaxId: 3702]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Glyceraldehyde-3-phosphate dehydrogenase-like, N-terminal domain
domain: Probable oxidoreductase At4g09670
species: Thale cress (Arabidopsis thaliana) [TaxId: 3702]

Probab=93.43  E-value=0.21  Score=38.09  Aligned_cols=91  Identities=14%  Similarity=0.009  Sum_probs=58.9

Q ss_pred             EEEEEcCCHHHHHHHHHHHHHCCCCeEEEEeCChhHHH-HHHHcCCCEE-EeCCCCcccHHHHHHHHHHHhCCCceEEEe
Q 017868          184 NVLIMGAGPIGLVTMLGAPRAFGAPRIVIVDVDDYRLS-VAKEIGADNI-VKVSTNLQDIAEEVEKIQKAMGTGIDVSFD  261 (365)
Q Consensus       184 ~vlI~G~g~~G~~ai~~l~~~~g~~~vi~v~~~~~~~~-~~~~~g~~~~-~~~~~~~~~~~~~i~~~~~~~~~~~d~vid  261 (365)
                      ++.|.|+|.+|...+..+...-+++.+.+.+.++++.+ +.++++.... ..+    .++.+.+    +  ...+|+|+-
T Consensus         3 ki~iIG~G~~g~~~~~~l~~~~~~~i~ai~d~~~~~~~~~~~~~~~~~~~~~~----~~~~~ll----~--~~~iD~v~I   72 (184)
T d1ydwa1           3 RIGVMGCADIARKVSRAIHLAPNATISGVASRSLEKAKAFATANNYPESTKIH----GSYESLL----E--DPEIDALYV   72 (184)
T ss_dssp             EEEEESCCTTHHHHHHHHHHCTTEEEEEEECSSHHHHHHHHHHTTCCTTCEEE----SSHHHHH----H--CTTCCEEEE
T ss_pred             EEEEEcCCHHHHHHHHHHHhCCCCEEEEEEeCCccccccchhccccccceeec----CcHHHhh----h--ccccceeee
Confidence            57889999999988883433336644445577776654 5577775321 111    2443333    2  457999999


Q ss_pred             CCCCHHHHHHHHHhcccCCEEEEE
Q 017868          262 CAGLNKTMSTALGATCAGGKVCLV  285 (365)
Q Consensus       262 ~~g~~~~~~~~~~~l~~~G~~~~~  285 (365)
                      ++....+.+.+..++..+ .-+++
T Consensus        73 ~tp~~~h~~~~~~~l~~g-~~v~~   95 (184)
T d1ydwa1          73 PLPTSLHVEWAIKAAEKG-KHILL   95 (184)
T ss_dssp             CCCGGGHHHHHHHHHTTT-CEEEE
T ss_pred             cccchhhcchhhhhhhcc-ceeec
Confidence            998888888888888865 44555

>d1jtva_ c.2.1.2 (A:) Human estrogenic 17beta-hydroxysteroid dehydrogenase {Human (Homo sapiens) [TaxId: 9606]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Tyrosine-dependent oxidoreductases
domain: Human estrogenic 17beta-hydroxysteroid dehydrogenase
species: Human (Homo sapiens) [TaxId: 9606]

Probab=93.37  E-value=0.35  Score=39.74  Aligned_cols=77  Identities=19%  Similarity=0.205  Sum_probs=40.3

Q ss_pred             EEEEEcC-CHHHHHHHHHHHHHCCCCeEEEE--eCChhH----HHHHHHcC---CC-EEEeCCCCcccHHHHHHHHHH-H
Q 017868          184 NVLIMGA-GPIGLVTMLGAPRAFGAPRIVIV--DVDDYR----LSVAKEIG---AD-NIVKVSTNLQDIAEEVEKIQK-A  251 (365)
Q Consensus       184 ~vlI~G~-g~~G~~ai~~l~~~~g~~~vi~v--~~~~~~----~~~~~~~g---~~-~~~~~~~~~~~~~~~i~~~~~-~  251 (365)
                      .|||+|+ +++|.+++..++ ..|++.+.+.  .++.++    .+.++++.   .. ..+..+-.  +.. .+.++.+ .
T Consensus         4 VvlITGassGIG~a~A~~la-~~Ga~v~~v~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~Dv~--~~~-~~~~~~~~~   79 (285)
T d1jtva_           4 VVLITGCSSGIGLHLAVRLA-SDPSQSFKVYATLRDLKTQGRLWEAARALACPPGSLETLQLDVR--DSK-SVAAARERV   79 (285)
T ss_dssp             EEEESCCSSHHHHHHHHHHH-TCTTCCEEEEEEESCGGGTHHHHHHHHHTTCCTTSEEEEECCTT--CHH-HHHHHHHTC
T ss_pred             EEEEccCCCHHHHHHHHHHH-HCCCCeEEEEEecCChhhhHHHHHHHHHHhccCCceEEEecccc--chH-hhhhhhhhc
Confidence            3567787 999999999454 5688643332  333222    23344443   22 12222222  221 2222222 2


Q ss_pred             hCCCceEEEeCCC
Q 017868          252 MGTGIDVSFDCAG  264 (365)
Q Consensus       252 ~~~~~d~vid~~g  264 (365)
                      ..+.+|+++.+.|
T Consensus        80 ~~g~idilvnnag   92 (285)
T d1jtva_          80 TEGRVDVLVCNAG   92 (285)
T ss_dssp             TTSCCSEEEECCC
T ss_pred             cccchhhhhhccc
Confidence            2468999999887

>d1v8ba1 c.2.1.4 (A:235-397) S-adenosylhomocystein hydrolase {Plasmodium falciparum, isolate 3D7 [TaxId: 5833]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Formate/glycerate dehydrogenases, NAD-domain
domain: S-adenosylhomocystein hydrolase
species: Plasmodium falciparum, isolate 3D7 [TaxId: 5833]

Probab=93.34  E-value=0.23  Score=36.87  Aligned_cols=94  Identities=21%  Similarity=0.203  Sum_probs=67.6

Q ss_pred             CCCCCCEEEEEcCCHHHHHHHHHHHHHCCCCeEEEEeCChhHHHHHHHcCCCEEEeCCCCcccHHHHHHHHHHHhCCCce
Q 017868          178 NIGPETNVLIMGAGPIGLVTMLGAPRAFGAPRIVIVDVDDYRLSVAKEIGADNIVKVSTNLQDIAEEVEKIQKAMGTGID  257 (365)
Q Consensus       178 ~~~~g~~vlI~G~g~~G~~ai~~l~~~~g~~~vi~v~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~i~~~~~~~~~~~d  257 (365)
                      -.-.|++++|.|=|-+|.-.++ -++.+|+ +|++++.++-+.-.+. +..-.+..           +.+.    -...|
T Consensus        19 ~~laGk~vvV~GYG~vGrG~A~-~~rg~Ga-~V~V~E~DPi~alqA~-mdGf~v~~-----------~~~a----~~~aD   80 (163)
T d1v8ba1          19 FLISGKIVVICGYGDVGKGCAS-SMKGLGA-RVYITEIDPICAIQAV-MEGFNVVT-----------LDEI----VDKGD   80 (163)
T ss_dssp             CCCTTSEEEEECCSHHHHHHHH-HHHHHTC-EEEEECSCHHHHHHHH-TTTCEECC-----------HHHH----TTTCS
T ss_pred             ceecCCEEEEecccccchhHHH-HHHhCCC-EEEEEecCchhhHHHH-hcCCccCc-----------hhHc----cccCc
Confidence            3568999999999999999999 8899999 7899988886543332 22222221           2222    35789


Q ss_pred             EEEeCCCCHHH-HHHHHHhcccCCEEEEEccCC
Q 017868          258 VSFDCAGLNKT-MSTALGATCAGGKVCLVGMGH  289 (365)
Q Consensus       258 ~vid~~g~~~~-~~~~~~~l~~~G~~~~~g~~~  289 (365)
                      +++-++|.... -..-++.|+.+..+...|...
T Consensus        81 i~vTaTGn~~vI~~~h~~~MKdgaIl~N~GHfd  113 (163)
T d1v8ba1          81 FFITCTGNVDVIKLEHLLKMKNNAVVGNIGHFD  113 (163)
T ss_dssp             EEEECCSSSSSBCHHHHTTCCTTCEEEECSSTT
T ss_pred             EEEEcCCCCccccHHHHHHhhCCeEEEeccccc
Confidence            99999998643 335678899888888776443

>d2b2ca1 c.66.1.17 (A:3-314) Spermidine synthase {Caenorhabditis elegans [TaxId: 6239]}

class: Alpha and beta proteins (a/b)
fold: S-adenosyl-L-methionine-dependent methyltransferases
superfamily: S-adenosyl-L-methionine-dependent methyltransferases
family: Spermidine synthase
domain: Spermidine synthase
species: Caenorhabditis elegans [TaxId: 6239]

Probab=93.29  E-value=0.34  Score=40.23  Aligned_cols=99  Identities=17%  Similarity=0.166  Sum_probs=62.9

Q ss_pred             CCCCEEEEEcCCHHHHHHHHHHHHHCCCCeEEEEeCChhHHHHHHHcCCC--------EEEeCCCCcccHHHHHHHHHHH
Q 017868          180 GPETNVLIMGAGPIGLVTMLGAPRAFGAPRIVIVDVDDYRLSVAKEIGAD--------NIVKVSTNLQDIAEEVEKIQKA  251 (365)
Q Consensus       180 ~~g~~vlI~G~g~~G~~ai~~l~~~~g~~~vi~v~~~~~~~~~~~~~g~~--------~~~~~~~~~~~~~~~i~~~~~~  251 (365)
                      ....+|||.|+|. |..+-. +++....+.+..++-+++-.+.++++-..        .+-...   .|..+.+++    
T Consensus       105 ~~pk~VLIiGgG~-G~~~re-llk~~~v~~v~~VEID~~Vv~~a~~~~~~~~~~~~dprv~i~i---~Da~~~l~~----  175 (312)
T d2b2ca1         105 PDPKRVLIIGGGD-GGILRE-VLKHESVEKVTMCEIDEMVIDVAKKFLPGMSCGFSHPKLDLFC---GDGFEFLKN----  175 (312)
T ss_dssp             SSCCEEEEESCTT-SHHHHH-HTTCTTCCEEEEECSCHHHHHHHHHHCTTTSGGGGCTTEEEEC---SCHHHHHHH----
T ss_pred             CCCCeEEEeCCCc-hHHHHH-HHHcCCcceEEEEcccHHHHHHHHhhchhhccccCCCCeEEEE---chHHHHHHh----
Confidence            3456999998754 444555 55666777899999999999988885321        111111   233344432    


Q ss_pred             hCCCceEEEeCCCC----------HHHHHHHHHhcccCCEEEEEcc
Q 017868          252 MGTGIDVSFDCAGL----------NKTMSTALGATCAGGKVCLVGM  287 (365)
Q Consensus       252 ~~~~~d~vid~~g~----------~~~~~~~~~~l~~~G~~~~~g~  287 (365)
                      ....+|+||--...          .+-+..+.++|+++|.++..+.
T Consensus       176 ~~~~yDvII~D~~dp~~~~~~L~t~eFy~~~~~~L~~~Gi~v~q~~  221 (312)
T d2b2ca1         176 HKNEFDVIITDSSDPVGPAESLFGQSYYELLRDALKEDGILSSQGE  221 (312)
T ss_dssp             CTTCEEEEEECCC-------------HHHHHHHHEEEEEEEEEECC
T ss_pred             CCCCCCEEEEcCCCCCCcchhhhhHHHHHHHHhhcCCCcEEEEecC
Confidence            36789999842211          2234567789999999998753

>d1xj5a_ c.66.1.17 (A:) Spermidine synthase {Thale cress (Arabidopsis thaliana) [TaxId: 3702]}

class: Alpha and beta proteins (a/b)
fold: S-adenosyl-L-methionine-dependent methyltransferases
superfamily: S-adenosyl-L-methionine-dependent methyltransferases
family: Spermidine synthase
domain: Spermidine synthase
species: Thale cress (Arabidopsis thaliana) [TaxId: 3702]

Probab=93.26  E-value=0.36  Score=39.78  Aligned_cols=98  Identities=19%  Similarity=0.241  Sum_probs=63.8

Q ss_pred             CCCCEEEEEcCCHHHHHHHHHHHHHCCCCeEEEEeCChhHHHHHHHcC---------CCEEEeCCCCcccHHHHHHHHHH
Q 017868          180 GPETNVLIMGAGPIGLVTMLGAPRAFGAPRIVIVDVDDYRLSVAKEIG---------ADNIVKVSTNLQDIAEEVEKIQK  250 (365)
Q Consensus       180 ~~g~~vlI~G~g~~G~~ai~~l~~~~g~~~vi~v~~~~~~~~~~~~~g---------~~~~~~~~~~~~~~~~~i~~~~~  250 (365)
                      ..-++|||.|+|. |..+-. +++..+.+.+..++-+++-.+.++++-         ....+.+    .|-.+.+++.  
T Consensus        79 ~~pk~VLiiGgG~-G~~~r~-~l~~~~~~~i~~VEiD~~Vi~~~~~~f~~~~~~~~~~r~~i~~----~Da~~~l~~~--  150 (290)
T d1xj5a_          79 PNPKKVLVIGGGD-GGVLRE-VARHASIEQIDMCEIDKMVVDVSKQFFPDVAIGYEDPRVNLVI----GDGVAFLKNA--  150 (290)
T ss_dssp             SCCCEEEEETCSS-SHHHHH-HTTCTTCCEEEEEESCHHHHHHHHHHCHHHHGGGGSTTEEEEE----SCHHHHHHTS--
T ss_pred             CCCcceEEecCCc-hHHHHH-HHhcccceeeEEecCCHHHHHHHHHhchhhhccccCCCcEEEE----ccHHHHHhhc--
Confidence            4457999998654 444555 666777778999999999888887753         1111111    2333334322  


Q ss_pred             HhCCCceEEE-eCCC---------CHHHHHHHHHhcccCCEEEEEc
Q 017868          251 AMGTGIDVSF-DCAG---------LNKTMSTALGATCAGGKVCLVG  286 (365)
Q Consensus       251 ~~~~~~d~vi-d~~g---------~~~~~~~~~~~l~~~G~~~~~g  286 (365)
                       ....+|+|| |+..         +.+-++.+.++|+++|.++...
T Consensus       151 -~~~~yDvIi~D~~dp~~~~~~L~t~eF~~~~~~~L~~~Gi~v~q~  195 (290)
T d1xj5a_         151 -AEGSYDAVIVDSSDPIGPAKELFEKPFFQSVARALRPGGVVCTQA  195 (290)
T ss_dssp             -CTTCEEEEEECCCCTTSGGGGGGSHHHHHHHHHHEEEEEEEEEEC
T ss_pred             -cccCccEEEEcCCCCCCcchhhCCHHHHHHHHHhcCCCcEEEEec
Confidence             245899876 3332         2346778889999999999875

>d1mxha_ c.2.1.2 (A:) Dihydropteridin reductase (pteridine reductase) {Trypanosoma cruzi [TaxId: 5693]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Tyrosine-dependent oxidoreductases
domain: Dihydropteridin reductase (pteridine reductase)
species: Trypanosoma cruzi [TaxId: 5693]

Probab=93.22  E-value=0.2  Score=40.59  Aligned_cols=78  Identities=15%  Similarity=0.135  Sum_probs=43.5

Q ss_pred             EEEEEcC-CHHHHHHHHHHHHHCCCCeEEEEeCChhHH--HHHH----HcCCCEEEeC--CCCcccHHHHHHH----HHH
Q 017868          184 NVLIMGA-GPIGLVTMLGAPRAFGAPRIVIVDVDDYRL--SVAK----EIGADNIVKV--STNLQDIAEEVEK----IQK  250 (365)
Q Consensus       184 ~vlI~G~-g~~G~~ai~~l~~~~g~~~vi~v~~~~~~~--~~~~----~~g~~~~~~~--~~~~~~~~~~i~~----~~~  250 (365)
                      +.||+|+ +++|.++++.+ ...|+ +|+.++++.++.  ++.+    ..+.......  .....+..+.+++    ..+
T Consensus         3 vAlVTGas~GIG~aia~~l-a~~G~-~Vvi~~r~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~   80 (266)
T d1mxha_           3 AAVITGGARRIGHSIAVRL-HQQGF-RVVVHYRHSEGAAQRLVAELNAARAGSAVLCKGDLSLSSSLLDCCEDIIDCSFR   80 (266)
T ss_dssp             EEEETTCSSHHHHHHHHHH-HHTTC-EEEEEESSCHHHHHHHHHHHHHHSTTCEEEEECCCSSSTTHHHHHHHHHHHHHH
T ss_pred             EEEEeCCCCHHHHHHHHHH-HHCCC-EEEEEECCchHHHHHHHHHHHhhcCCceEEEecccccchhHHHHHHHHHHHHHH
Confidence            4688887 89999999945 46699 566666664432  2222    2233332211  1112222333322    222


Q ss_pred             HhCCCceEEEeCCC
Q 017868          251 AMGTGIDVSFDCAG  264 (365)
Q Consensus       251 ~~~~~~d~vid~~g  264 (365)
                      .. +.+|++++++|
T Consensus        81 ~~-g~iDilvnnAG   93 (266)
T d1mxha_          81 AF-GRCDVLVNNAS   93 (266)
T ss_dssp             HH-SCCCEEEECCC
T ss_pred             Hh-CCCCEEEECCc
Confidence            22 58999999888

>d1jw9b_ c.111.1.1 (B:) Molybdenum cofactor biosynthesis protein MoeB {Escherichia coli [TaxId: 562]}

class: Alpha and beta proteins (a/b)
fold: Activating enzymes of the ubiquitin-like proteins
superfamily: Activating enzymes of the ubiquitin-like proteins
family: Molybdenum cofactor biosynthesis protein MoeB
domain: Molybdenum cofactor biosynthesis protein MoeB
species: Escherichia coli [TaxId: 562]

Probab=93.05  E-value=0.3  Score=39.13  Aligned_cols=34  Identities=26%  Similarity=0.486  Sum_probs=28.3

Q ss_pred             CCEEEEEcCCHHHHHHHHHHHHHCCCCeEEEEeCC
Q 017868          182 ETNVLIMGAGPIGLVTMLGAPRAFGAPRIVIVDVD  216 (365)
Q Consensus       182 g~~vlI~G~g~~G~~ai~~l~~~~g~~~vi~v~~~  216 (365)
                      ..+|+|.|+|++|..++. .+.+.|..++..+|.+
T Consensus        30 ~~~VliiG~GglGs~va~-~La~~Gvg~i~lvD~D   63 (247)
T d1jw9b_          30 DSRVLIVGLGGLGCAASQ-YLASAGVGNLTLLDFD   63 (247)
T ss_dssp             HCEEEEECCSHHHHHHHH-HHHHHTCSEEEEECCC
T ss_pred             CCCEEEECCCHHHHHHHH-HHHHcCCCeEEEECCc
Confidence            359999999999999999 4456699999998644

>d1inla_ c.66.1.17 (A:) Spermidine synthase {Thermotoga maritima [TaxId: 2336]}

class: Alpha and beta proteins (a/b)
fold: S-adenosyl-L-methionine-dependent methyltransferases
superfamily: S-adenosyl-L-methionine-dependent methyltransferases
family: Spermidine synthase
domain: Spermidine synthase
species: Thermotoga maritima [TaxId: 2336]

Probab=92.97  E-value=0.19  Score=41.55  Aligned_cols=96  Identities=20%  Similarity=0.193  Sum_probs=62.3

Q ss_pred             CCCEEEEEcCCHHHHHHHHHHHHHCCCCeEEEEeCChhHHHHHHHcCC---------C-EEEeCCCCcccHHHHHHHHHH
Q 017868          181 PETNVLIMGAGPIGLVTMLGAPRAFGAPRIVIVDVDDYRLSVAKEIGA---------D-NIVKVSTNLQDIAEEVEKIQK  250 (365)
Q Consensus       181 ~g~~vlI~G~g~~G~~ai~~l~~~~g~~~vi~v~~~~~~~~~~~~~g~---------~-~~~~~~~~~~~~~~~i~~~~~  250 (365)
                      ...+|||.|+|. |..+-. +++..+.+.|.+++-+++-.+.++++-.         . .++.     .|..+.+++   
T Consensus        89 ~pk~VLiiGgG~-G~~~r~-~l~~~~~~~i~~VEIDp~Vi~~a~~~~~~~~~~~~d~rv~v~~-----~Da~~~l~~---  158 (295)
T d1inla_          89 NPKKVLIIGGGD-GGTLRE-VLKHDSVEKAILCEVDGLVIEAARKYLKQTSCGFDDPRAEIVI-----ANGAEYVRK---  158 (295)
T ss_dssp             SCCEEEEEECTT-CHHHHH-HTTSTTCSEEEEEESCHHHHHHHHHHCHHHHGGGGCTTEEEEE-----SCHHHHGGG---
T ss_pred             CCceEEEecCCc-hHHHHH-HHhcCCCceEEEecCCHHHHHHHHHHHHhhcccccCCCcEEEh-----hhHHHHHhc---
Confidence            447999998754 444445 6666677789999999998888877431         1 1222     233333432   


Q ss_pred             HhCCCceEEEe-CCC----------CHHHHHHHHHhcccCCEEEEEcc
Q 017868          251 AMGTGIDVSFD-CAG----------LNKTMSTALGATCAGGKVCLVGM  287 (365)
Q Consensus       251 ~~~~~~d~vid-~~g----------~~~~~~~~~~~l~~~G~~~~~g~  287 (365)
                       ....+|+||- +..          +.+-+..+.++|+++|.++....
T Consensus       159 -~~~~yDvIi~D~~dp~~~~~~~L~t~efy~~~~~~L~~~Gi~v~q~~  205 (295)
T d1inla_         159 -FKNEFDVIIIDSTDPTAGQGGHLFTEEFYQACYDALKEDGVFSAETE  205 (295)
T ss_dssp             -CSSCEEEEEEEC----------CCSHHHHHHHHHHEEEEEEEEEECC
T ss_pred             -CCCCCCEEEEcCCCCCcCchhhhccHHHHHHHHhhcCCCcEEEEecC
Confidence             3678999974 221          23456678889999999988753

>d2bkaa1 c.2.1.2 (A:5-236) TAT-interacting protein TIP30 {Human (Homo sapiens) [TaxId: 9606]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Tyrosine-dependent oxidoreductases
domain: TAT-interacting protein TIP30
species: Human (Homo sapiens) [TaxId: 9606]

Probab=92.93  E-value=0.039  Score=44.19  Aligned_cols=77  Identities=18%  Similarity=0.261  Sum_probs=43.2

Q ss_pred             CCCEEEEEcC-CHHHHHHHHHHHHHCCCCeEEEEeCChhHHHHHHHcCCCEEEeCCCCcccHHHHHHHHHHHhCCCceEE
Q 017868          181 PETNVLIMGA-GPIGLVTMLGAPRAFGAPRIVIVDVDDYRLSVAKEIGADNIVKVSTNLQDIAEEVEKIQKAMGTGIDVS  259 (365)
Q Consensus       181 ~g~~vlI~G~-g~~G~~ai~~l~~~~g~~~vi~v~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~i~~~~~~~~~~~d~v  259 (365)
                      .+.+|||+|+ |.+|..+++.+.+.-.+..|.++.+++.+......-.... ...+-  .+.. .+.+.    -.++|.+
T Consensus        13 ~~k~IlItGaTG~iG~~l~~~Ll~~g~~~~v~~~~R~~~~~~~~~~~~i~~-~~~D~--~~~~-~~~~~----~~~~d~v   84 (232)
T d2bkaa1          13 QNKSVFILGASGETGRVLLKEILEQGLFSKVTLIGRRKLTFDEEAYKNVNQ-EVVDF--EKLD-DYASA----FQGHDVG   84 (232)
T ss_dssp             TCCEEEEECTTSHHHHHHHHHHHHHTCCSEEEEEESSCCCCCSGGGGGCEE-EECCG--GGGG-GGGGG----GSSCSEE
T ss_pred             CCCEEEEECCCcHHHHHHHHHHHhCCCCCEEEEEecChhhhcccccceeee-eeecc--cccc-ccccc----ccccccc
Confidence            3468999998 9999999996665533356778777553322111111221 11111  1111 11111    2579999


Q ss_pred             EeCCCC
Q 017868          260 FDCAGL  265 (365)
Q Consensus       260 id~~g~  265 (365)
                      +.++|.
T Consensus        85 i~~~~~   90 (232)
T d2bkaa1          85 FCCLGT   90 (232)
T ss_dssp             EECCCC
T ss_pred             cccccc
Confidence            999885

>d2o07a1 c.66.1.17 (A:16-300) Spermidine synthase {Human (Homo sapiens) [TaxId: 9606]}

class: Alpha and beta proteins (a/b)
fold: S-adenosyl-L-methionine-dependent methyltransferases
superfamily: S-adenosyl-L-methionine-dependent methyltransferases
family: Spermidine synthase
domain: Spermidine synthase
species: Human (Homo sapiens) [TaxId: 9606]

Probab=92.88  E-value=0.4  Score=39.36  Aligned_cols=99  Identities=19%  Similarity=0.200  Sum_probs=62.4

Q ss_pred             CCCCCEEEEEcCCHHHHHHHHHHHHHCCCCeEEEEeCChhHHHHHHHcCC--------CEEEeCCCCcccHHHHHHHHHH
Q 017868          179 IGPETNVLIMGAGPIGLVTMLGAPRAFGAPRIVIVDVDDYRLSVAKEIGA--------DNIVKVSTNLQDIAEEVEKIQK  250 (365)
Q Consensus       179 ~~~g~~vlI~G~g~~G~~ai~~l~~~~g~~~vi~v~~~~~~~~~~~~~g~--------~~~~~~~~~~~~~~~~i~~~~~  250 (365)
                      ....++|||.|+|. |..+-. +++..+..++..++-+++-.+.++++-.        +.+..+.   .|....+++   
T Consensus        76 ~~~pk~vLiiGgG~-G~~~~~-~l~~~~~~~v~~vEiD~~Vv~~a~~~~~~~~~~~~d~rv~i~~---~Da~~~l~~---  147 (285)
T d2o07a1          76 HPNPRKVLIIGGGD-GGVLRE-VVKHPSVESVVQCEIDEDVIQVSKKFLPGMAIGYSSSKLTLHV---GDGFEFMKQ---  147 (285)
T ss_dssp             SSSCCEEEEEECTT-SHHHHH-HTTCTTCCEEEEEESCHHHHHHHHHHCHHHHGGGGCTTEEEEE---SCHHHHHHT---
T ss_pred             CcCcCeEEEeCCCc-hHHHHH-HHHcCCcceeeeccCCHHHHHHHHhhchhhccccCCCCceEEE---ccHHHHHhc---
Confidence            34557999998754 444555 5566677799999999998888876431        1111111   233333332   


Q ss_pred             HhCCCceEEEe-CCC---------CHHHHHHHHHhcccCCEEEEEc
Q 017868          251 AMGTGIDVSFD-CAG---------LNKTMSTALGATCAGGKVCLVG  286 (365)
Q Consensus       251 ~~~~~~d~vid-~~g---------~~~~~~~~~~~l~~~G~~~~~g  286 (365)
                       ....+|+||- ...         +.+-+..+-++|+++|.++...
T Consensus       148 -~~~~yDvIi~D~~~p~~~~~~L~t~eF~~~~~~~L~~~Gi~v~q~  192 (285)
T d2o07a1         148 -NQDAFDVIITDSSDPMGPAESLFKESYYQLMKTALKEDGVLCCQG  192 (285)
T ss_dssp             -CSSCEEEEEEECC-----------CHHHHHHHHHEEEEEEEEEEE
T ss_pred             -CCCCCCEEEEcCCCCCCcccccccHHHHHHHHHhcCCCCeEEEec
Confidence             3678999974 221         1124556788999999998865

>d1wxxa2 c.66.1.51 (A:65-382) Hypothetical protein TTHA1280, middle and C-terminal domains {Thermus thermophilus [TaxId: 274]}

class: Alpha and beta proteins (a/b)
fold: S-adenosyl-L-methionine-dependent methyltransferases
superfamily: S-adenosyl-L-methionine-dependent methyltransferases
family: hypothetical RNA methyltransferase
domain: Hypothetical protein TTHA1280, middle and C-terminal domains
species: Thermus thermophilus [TaxId: 274]

Probab=92.78  E-value=0.17  Score=42.55  Aligned_cols=101  Identities=16%  Similarity=0.107  Sum_probs=60.4

Q ss_pred             CCCCEEEEEcCCHHHHHHHHHHHHHCCCCeEEEEeCChhHHHHHH----HcCCCEEEeCCCCcccHHHHHHHHHHHhCCC
Q 017868          180 GPETNVLIMGAGPIGLVTMLGAPRAFGAPRIVIVDVDDYRLSVAK----EIGADNIVKVSTNLQDIAEEVEKIQKAMGTG  255 (365)
Q Consensus       180 ~~g~~vlI~G~g~~G~~ai~~l~~~~g~~~vi~v~~~~~~~~~~~----~~g~~~~~~~~~~~~~~~~~i~~~~~~~~~~  255 (365)
                      .+|++||=.++|. |..++. +++  |+..|++++.++...+.++    ..|.+.+.....   +..+.++.+.. .+..
T Consensus       144 ~~g~rVLDl~~gt-G~~s~~-~a~--g~~~V~~vD~s~~al~~a~~n~~~ngl~~~~~i~~---d~~~~~~~~~~-~~~~  215 (318)
T d1wxxa2         144 FRGERALDVFSYA-GGFALH-LAL--GFREVVAVDSSAEALRRAEENARLNGLGNVRVLEA---NAFDLLRRLEK-EGER  215 (318)
T ss_dssp             CCEEEEEEETCTT-THHHHH-HHH--HEEEEEEEESCHHHHHHHHHHHHHTTCTTEEEEES---CHHHHHHHHHH-TTCC
T ss_pred             hCCCeeeccCCCC-cHHHHH-HHh--cCCcEEeecchHHHHHHHHHHHHHcCCCCcceeec---cHHHHhhhhHh-hhcC
Confidence            4688988876533 334445 443  4457999999998776554    456543322222   33333333322 2678


Q ss_pred             ceEEEeC---CC--C----------HHHHHHHHHhcccCCEEEEEccC
Q 017868          256 IDVSFDC---AG--L----------NKTMSTALGATCAGGKVCLVGMG  288 (365)
Q Consensus       256 ~d~vid~---~g--~----------~~~~~~~~~~l~~~G~~~~~g~~  288 (365)
                      ||+|+--   .+  .          ...+..+.++|+|||.++....+
T Consensus       216 fD~Vi~DpP~~~~~~~~~~~~~~~~~~l~~~a~~lLkpGG~Lv~~scs  263 (318)
T d1wxxa2         216 FDLVVLDPPAFAKGKKDVERAYRAYKEVNLRAIKLLKEGGILATASCS  263 (318)
T ss_dssp             EEEEEECCCCSCCSTTSHHHHHHHHHHHHHHHHHTEEEEEEEEEEECC
T ss_pred             CCEEEEcCCccccchHHHHHHHHHHHHHHHHHHHHcCCCCEEEEEeCC
Confidence            9998741   11  1          12455678899999999887543

>d2fyta1 c.66.1.6 (A:238-548) Protein arginine N-methyltransferase 3, PRMT3 {Human (Homo sapiens) [TaxId: 9606]}

class: Alpha and beta proteins (a/b)
fold: S-adenosyl-L-methionine-dependent methyltransferases
superfamily: S-adenosyl-L-methionine-dependent methyltransferases
family: Arginine methyltransferase
domain: Protein arginine N-methyltransferase 3, PRMT3
species: Human (Homo sapiens) [TaxId: 9606]

Probab=92.70  E-value=0.16  Score=42.42  Aligned_cols=96  Identities=20%  Similarity=0.322  Sum_probs=54.5

Q ss_pred             cCCCCCCEEEEEcCCHHHHHHHHHHHHHCCCCeEEEEeCChhHHH---HHHHcCCC-EEEeCCCCcccHHHHHHHHHHHh
Q 017868          177 ANIGPETNVLIMGAGPIGLVTMLGAPRAFGAPRIVIVDVDDYRLS---VAKEIGAD-NIVKVSTNLQDIAEEVEKIQKAM  252 (365)
Q Consensus       177 ~~~~~g~~vlI~G~g~~G~~ai~~l~~~~g~~~vi~v~~~~~~~~---~~~~~g~~-~~~~~~~~~~~~~~~i~~~~~~~  252 (365)
                      ..+.+|++||-.|+| .|..++. +|+ .|+++|++++.++.-..   ..++.+.. .+.....+..++.        ..
T Consensus        31 ~~~~~~~~VLDiGcG-~G~lsl~-aa~-~Ga~~V~aid~s~~~~~a~~~~~~~~~~~~i~~~~~~~~~l~--------~~   99 (311)
T d2fyta1          31 PHIFKDKVVLDVGCG-TGILSMF-AAK-AGAKKVLGVDQSEILYQAMDIIRLNKLEDTITLIKGKIEEVH--------LP   99 (311)
T ss_dssp             GGGTTTCEEEEETCT-TSHHHHH-HHH-TTCSEEEEEESSTHHHHHHHHHHHTTCTTTEEEEESCTTTSC--------CS
T ss_pred             cccCCcCEEEEECCC-CCHHHHH-HHH-cCCCEEEEEeCHHHHHHHHHHHHHhCCCccceEEEeeHHHhc--------Cc
Confidence            456789999999886 3555555 554 48889999998875432   33344432 2211112222210        11


Q ss_pred             CCCceEEEeC-CC----CH----HHHHHHHHhcccCCEEE
Q 017868          253 GTGIDVSFDC-AG----LN----KTMSTALGATCAGGKVC  283 (365)
Q Consensus       253 ~~~~d~vid~-~g----~~----~~~~~~~~~l~~~G~~~  283 (365)
                      ...+|+|+.- .+    ..    ..+...-+.|+++|+++
T Consensus       100 ~~~~D~Ivse~~~~~~~~e~~~~~~~~a~~~~Lkp~G~ii  139 (311)
T d2fyta1         100 VEKVDVIISEWMGYFLLFESMLDSVLYAKNKYLAKGGSVY  139 (311)
T ss_dssp             CSCEEEEEECCCBTTBTTTCHHHHHHHHHHHHEEEEEEEE
T ss_pred             cccceEEEEeeeeeecccccccHHHHHHHHhcCCCCcEEe
Confidence            4689999862 11    11    12223345799999876

>d2i6ga1 c.66.1.44 (A:1-198) Putative methyltransferase TehB {Salmonella typhimurium [TaxId: 90371]}

class: Alpha and beta proteins (a/b)
fold: S-adenosyl-L-methionine-dependent methyltransferases
superfamily: S-adenosyl-L-methionine-dependent methyltransferases
family: TehB-like
domain: Putative methyltransferase TehB
species: Salmonella typhimurium [TaxId: 90371]

Probab=92.69  E-value=0.52  Score=36.13  Aligned_cols=92  Identities=18%  Similarity=0.206  Sum_probs=59.0

Q ss_pred             CCCCCEEEEEcCCHHHHHHHHHHHHHCCCCeEEEEeCChhHHHHH----HHcCCCE--EEeCCCCcccHHHHHHHHHHHh
Q 017868          179 IGPETNVLIMGAGPIGLVTMLGAPRAFGAPRIVIVDVDDYRLSVA----KEIGADN--IVKVSTNLQDIAEEVEKIQKAM  252 (365)
Q Consensus       179 ~~~g~~vlI~G~g~~G~~ai~~l~~~~g~~~vi~v~~~~~~~~~~----~~~g~~~--~~~~~~~~~~~~~~i~~~~~~~  252 (365)
                      +++| +||=.|+| .|..+.. +++. |+ .|++++.+++..+.+    +..+.+.  ....+.....           .
T Consensus        29 ~~~g-rvLDiGcG-~G~~~~~-la~~-g~-~v~gvD~s~~~l~~a~~~~~~~~~~~~~~~~~d~~~~~-----------~   92 (198)
T d2i6ga1          29 VAPG-RTLDLGCG-NGRNSLY-LAAN-GY-DVTAWDKNPASMANLERIKAAEGLDNLQTDLVDLNTLT-----------F   92 (198)
T ss_dssp             SCSC-EEEEETCT-TSHHHHH-HHHT-TC-EEEEEESCHHHHHHHHHHHHHTTCTTEEEEECCTTTCC-----------C
T ss_pred             CCCC-cEEEECCC-CCHHHHH-HHHH-hh-hhccccCcHHHHHHHHHHhhhccccchhhhheeccccc-----------c
Confidence            4454 89889986 5777777 6654 88 689999999876654    3445542  2222211111           1


Q ss_pred             CCCceEEEeCCC-----C---HHHHHHHHHhcccCCEEEEEc
Q 017868          253 GTGIDVSFDCAG-----L---NKTMSTALGATCAGGKVCLVG  286 (365)
Q Consensus       253 ~~~~d~vid~~g-----~---~~~~~~~~~~l~~~G~~~~~g  286 (365)
                      ...+|+|+...-     .   ...+..+.++|+++|.++...
T Consensus        93 ~~~fD~I~~~~~~~~~~~~~~~~~l~~~~~~L~pgG~~~~~~  134 (198)
T d2i6ga1          93 DGEYDFILSTVVMMFLEAQTIPGLIANMQRCTKPGGYNLIVA  134 (198)
T ss_dssp             CCCEEEEEEESCGGGSCTTHHHHHHHHHHHTEEEEEEEEEEE
T ss_pred             cccccEEEEeeeeecCCHHHHHHHHHHHHHHcCCCcEEEEEE
Confidence            467999986221     1   236667888999999988764

>d2bhsa1 c.79.1.1 (A:2-293) O-acetylserine sulfhydrylase (Cysteine synthase) {Escherichia coli, isoform B (CysM) [TaxId: 562]}

class: Alpha and beta proteins (a/b)
fold: Tryptophan synthase beta subunit-like PLP-dependent enzymes
superfamily: Tryptophan synthase beta subunit-like PLP-dependent enzymes
family: Tryptophan synthase beta subunit-like PLP-dependent enzymes
domain: O-acetylserine sulfhydrylase (Cysteine synthase)
species: Escherichia coli, isoform B (CysM) [TaxId: 562]

Probab=92.69  E-value=2  Score=34.87  Aligned_cols=111  Identities=14%  Similarity=0.154  Sum_probs=69.3

Q ss_pred             HhcCCCCCCEEEEEcCCHHHHHHHHHHHHHCCCCeEEEEeC--ChhHHHHHHHcCCCEEEeCCCC---------------
Q 017868          175 RRANIGPETNVLIMGAGPIGLVTMLGAPRAFGAPRIVIVDV--DDYRLSVAKEIGADNIVKVSTN---------------  237 (365)
Q Consensus       175 ~~~~~~~g~~vlI~G~g~~G~~ai~~l~~~~g~~~vi~v~~--~~~~~~~~~~~g~~~~~~~~~~---------------  237 (365)
                      +...+.++.+|+...+|..|++++. .++.+|.+.++.+..  ++.|.+.++.+|+.-++.....               
T Consensus        53 ~~g~~~~~~~vv~aSsGN~g~a~A~-~a~~~G~~~~i~~p~~~~~~k~~~~~~~GA~v~~v~~~~~~~~a~~~~~~~~~~  131 (292)
T d2bhsa1          53 KRGEIKPGDVLIEATSGNTGIALAM-IAALKGYRMKLLMPDNMSQERRAAMRAYGAELILVTKEQGMEGARDLALEMANR  131 (292)
T ss_dssp             HTTSCCTTSEEEEECCSHHHHHHHH-HHHHHTCEEEEEEESCCCHHHHHHHHHTTCEEEEECTTTHHHHHHHHHHHHHHH
T ss_pred             HhCCcCCCceeeeecccchhHHHHH-HHHhcCcceEeeeccCchhhhhHHHHHhCCCcceeecccchHHHHHHHhhcccc
Confidence            4555666766666677999999999 999999987777643  4677889999999754332110               


Q ss_pred             -----------cccHHH----HHHHHHHHhCCCceEEEeCCCCHHHHH---HHHHhcccCCEEEEEc
Q 017868          238 -----------LQDIAE----EVEKIQKAMGTGIDVSFDCAGLNKTMS---TALGATCAGGKVCLVG  286 (365)
Q Consensus       238 -----------~~~~~~----~i~~~~~~~~~~~d~vid~~g~~~~~~---~~~~~l~~~G~~~~~g  286 (365)
                                 ...+..    .-.++.+..+..+|.++-++|+..++.   ..++.+.+..+++.+.
T Consensus       132 ~~~~~~~~~~~~~~~~~~~~~~a~Ei~~q~~~~~d~vv~~~G~Gg~~~G~~~~~k~~~~~~~i~~Ve  198 (292)
T d2bhsa1         132 GEGKLLDQFNNPDNPYAHYTTTGPEIWQQTGGRITHFVSSMGTTGTITGVSRFMREQSKPVTIVGLQ  198 (292)
T ss_dssp             TSSEECCTTTCTHHHHHHHHTHHHHHHHHTTTCCCEEEEECSSSHHHHHHHHHHHTSSSCCEEEEEE
T ss_pred             ccccccCCCchhcchhhHHHHHHHHhHHhcCCCCCcccccCCCccchhhhhhhhhhccCcceEEEec
Confidence                       000000    011222233556899998888655544   4445556667776654

>d1gtea4 c.4.1.1 (A:184-287,A:441-532) Dihydropyrimidine dehydrogenase, domain 2 {Pig (Sus scrofa) [TaxId: 9823]}

class: Alpha and beta proteins (a/b)
fold: Nucleotide-binding domain
superfamily: Nucleotide-binding domain
family: N-terminal domain of adrenodoxin reductase-like
domain: Dihydropyrimidine dehydrogenase, domain 2
species: Pig (Sus scrofa) [TaxId: 9823]

Probab=92.68  E-value=0.058  Score=41.54  Aligned_cols=35  Identities=20%  Similarity=0.418  Sum_probs=28.4

Q ss_pred             CCEEEEEcCCHHHHHHHHHHHHHCCCCeEEEEeCCh
Q 017868          182 ETNVLIMGAGPIGLVTMLGAPRAFGAPRIVIVDVDD  217 (365)
Q Consensus       182 g~~vlI~G~g~~G~~ai~~l~~~~g~~~vi~v~~~~  217 (365)
                      +++|+|.|+|+.|+.++. .+...|++.|.++++++
T Consensus         4 ~~kVaIIGaGpaGl~aA~-~l~~~G~~~V~v~E~~~   38 (196)
T d1gtea4           4 SAKIALLGAGPASISCAS-FLARLGYSDITIFEKQE   38 (196)
T ss_dssp             GCCEEEECCSHHHHHHHH-HHHHTTCCCEEEEESSS
T ss_pred             CCEEEEECChHHHHHHHH-HHHHCCCCeEEEEEecC
Confidence            579999999999999999 66777986566666654

>d1y1pa1 c.2.1.2 (A:2-343) Aldehyde reductase II {Sporobolomyces salmonicolor [TaxId: 5005]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Tyrosine-dependent oxidoreductases
domain: Aldehyde reductase II
species: Sporobolomyces salmonicolor [TaxId: 5005]

Probab=92.45  E-value=0.13  Score=43.57  Aligned_cols=45  Identities=16%  Similarity=0.129  Sum_probs=33.4

Q ss_pred             CCCCCCEEEEEcC-CHHHHHHHHHHHHHCCCCeEEEEeCChhHHHHHH
Q 017868          178 NIGPETNVLIMGA-GPIGLVTMLGAPRAFGAPRIVIVDVDDYRLSVAK  224 (365)
Q Consensus       178 ~~~~g~~vlI~G~-g~~G~~ai~~l~~~~g~~~vi~v~~~~~~~~~~~  224 (365)
                      -+.+|.+|||+|+ |-+|..+++.|+ ..|+ .|+++.++.++.+.++
T Consensus         7 ~~~~gk~VlVTG~sGfIGs~l~~~Ll-~~G~-~V~~~vR~~~~~~~~~   52 (342)
T d1y1pa1           7 VLPEGSLVLVTGANGFVASHVVEQLL-EHGY-KVRGTARSASKLANLQ   52 (342)
T ss_dssp             SSCTTCEEEEETTTSHHHHHHHHHHH-HTTC-EEEEEESSHHHHHHHH
T ss_pred             CCCCcCEEEEECCCCHHHHHHHHHHH-HCcC-EEEEEeCCchhHHHHH
Confidence            3678999999987 889999998454 4598 4666667776655443

>d2frna1 c.66.1.47 (A:19-278) Hypothetical protein PH0793 {Pyrococcus horikoshii [TaxId: 53953]}

class: Alpha and beta proteins (a/b)
fold: S-adenosyl-L-methionine-dependent methyltransferases
superfamily: S-adenosyl-L-methionine-dependent methyltransferases
family: Met-10+ protein-like
domain: Hypothetical protein PH0793
species: Pyrococcus horikoshii [TaxId: 53953]

Probab=92.44  E-value=0.13  Score=41.95  Aligned_cols=97  Identities=14%  Similarity=0.180  Sum_probs=60.0

Q ss_pred             CCCCCCEEEEEcCCHHHHHHHHHHHHHCCCCeEEEEeCChhHHHHHH----HcCCCE-EEeCCCCcccHHHHHHHHHHHh
Q 017868          178 NIGPETNVLIMGAGPIGLVTMLGAPRAFGAPRIVIVDVDDYRLSVAK----EIGADN-IVKVSTNLQDIAEEVEKIQKAM  252 (365)
Q Consensus       178 ~~~~g~~vlI~G~g~~G~~ai~~l~~~~g~~~vi~v~~~~~~~~~~~----~~g~~~-~~~~~~~~~~~~~~i~~~~~~~  252 (365)
                      .+++|++||-.+||. |..++. +|+. |...|++++.+++..+.++    ..+... +..+..+..++.         .
T Consensus       104 ~~~~g~~VlD~~aG~-G~~~l~-~a~~-~~~~V~avd~n~~a~~~~~~N~~~n~l~~~v~~~~~D~~~~~---------~  171 (260)
T d2frna1         104 VAKPDELVVDMFAGI-GHLSLP-IAVY-GKAKVIAIEKDPYTFKFLVENIHLNKVEDRMSAYNMDNRDFP---------G  171 (260)
T ss_dssp             HCCTTCEEEETTCTT-TTTHHH-HHHH-TCCEEEEECCCHHHHHHHHHHHHHTTCTTTEEEECSCTTTCC---------C
T ss_pred             hcCCccEEEECcceE-cHHHHH-HHHh-CCcEEEEecCCHHHHHHHHHHHHHhCCCceEEEEEcchHHhc---------c
Confidence            368999999986632 445555 5555 5558999999998776554    345432 322333322221         1


Q ss_pred             CCCceEEE-eCC-CCHHHHHHHHHhcccCCEEEEEc
Q 017868          253 GTGIDVSF-DCA-GLNKTMSTALGATCAGGKVCLVG  286 (365)
Q Consensus       253 ~~~~d~vi-d~~-g~~~~~~~~~~~l~~~G~~~~~g  286 (365)
                      ...+|.|+ +.. .+...+..+++.++++|.+....
T Consensus       172 ~~~~D~Ii~~~p~~~~~~l~~a~~~l~~gG~lh~~~  207 (260)
T d2frna1         172 ENIADRILMGYVVRTHEFIPKALSIAKDGAIIHYHN  207 (260)
T ss_dssp             CSCEEEEEECCCSSGGGGHHHHHHHEEEEEEEEEEE
T ss_pred             CCCCCEEEECCCCchHHHHHHHHhhcCCCCEEEEEe
Confidence            35688665 322 34457778999999999876543

>d1im8a_ c.66.1.14 (A:) Hypothetical protein HI0319 (YecO) {Haemophilus influenzae [TaxId: 727]}

class: Alpha and beta proteins (a/b)
fold: S-adenosyl-L-methionine-dependent methyltransferases
superfamily: S-adenosyl-L-methionine-dependent methyltransferases
family: Hypothetical protein HI0319 (YecO)
domain: Hypothetical protein HI0319 (YecO)
species: Haemophilus influenzae [TaxId: 727]

Probab=92.24  E-value=0.48  Score=37.14  Aligned_cols=95  Identities=12%  Similarity=0.152  Sum_probs=59.6

Q ss_pred             CCCCCEEEEEcCCHHHHHHHHHHHHH---CCCCeEEEEeCChhHHHHHHH----cCCCE-EEeCCCCcccHHHHHHHHHH
Q 017868          179 IGPETNVLIMGAGPIGLVTMLGAPRA---FGAPRIVIVDVDDYRLSVAKE----IGADN-IVKVSTNLQDIAEEVEKIQK  250 (365)
Q Consensus       179 ~~~g~~vlI~G~g~~G~~ai~~l~~~---~g~~~vi~v~~~~~~~~~~~~----~g~~~-~~~~~~~~~~~~~~i~~~~~  250 (365)
                      ++++.+||=.|+|. |..+.. +++.   .++ +|+++|.+++-.+.+++    .+... +.....+..++         
T Consensus        37 ~~~~~~vLDlGCGt-G~~~~~-l~~~~~~~~~-~v~giD~S~~ml~~A~~~~~~~~~~~~~~~~~~d~~~~---------  104 (225)
T d1im8a_          37 VTADSNVYDLGCSR-GAATLS-ARRNINQPNV-KIIGIDNSQPMVERCRQHIAAYHSEIPVEILCNDIRHV---------  104 (225)
T ss_dssp             CCTTCEEEEESCTT-CHHHHH-HHHTCCCSSC-EEEEECSCHHHHHHHHHHHHTSCCSSCEEEECSCTTTC---------
T ss_pred             cCCCCEEEEeccch-hhHHHH-HHHhhcCCCC-ceEEeCCCHHHHHHHHHHhHhhcccchhhhccchhhcc---------
Confidence            68899999999854 555555 4443   456 79999999988777754    23221 11111111111         


Q ss_pred             HhCCCceEEEeCCC--------CHHHHHHHHHhcccCCEEEEEc
Q 017868          251 AMGTGIDVSFDCAG--------LNKTMSTALGATCAGGKVCLVG  286 (365)
Q Consensus       251 ~~~~~~d~vid~~g--------~~~~~~~~~~~l~~~G~~~~~g  286 (365)
                       ....+|+++-...        ....+..+.+.|+|+|.++...
T Consensus       105 -~~~~~d~i~~~~~l~~~~~~d~~~~l~~i~~~LkpgG~li~~~  147 (225)
T d1im8a_         105 -EIKNASMVILNFTLQFLPPEDRIALLTKIYEGLNPNGVLVLSE  147 (225)
T ss_dssp             -CCCSEEEEEEESCGGGSCGGGHHHHHHHHHHHEEEEEEEEEEE
T ss_pred             -ccccceeeEEeeeccccChhhHHHHHHHHHHhCCCCceeeccc
Confidence             1346677765332        1246788999999999998864

>d1uira_ c.66.1.17 (A:) Spermidine synthase {Thermus thermophilus [TaxId: 274]}

class: Alpha and beta proteins (a/b)
fold: S-adenosyl-L-methionine-dependent methyltransferases
superfamily: S-adenosyl-L-methionine-dependent methyltransferases
family: Spermidine synthase
domain: Spermidine synthase
species: Thermus thermophilus [TaxId: 274]

Probab=92.19  E-value=0.36  Score=40.23  Aligned_cols=96  Identities=23%  Similarity=0.219  Sum_probs=62.6

Q ss_pred             CCCCEEEEEcCCHHHHHHHHHHHHHCCCCeEEEEeCChhHHHHHHHcC------C-----CEEEeCCCCcccHHHHHHHH
Q 017868          180 GPETNVLIMGAGPIGLVTMLGAPRAFGAPRIVIVDVDDYRLSVAKEIG------A-----DNIVKVSTNLQDIAEEVEKI  248 (365)
Q Consensus       180 ~~g~~vlI~G~g~~G~~ai~~l~~~~g~~~vi~v~~~~~~~~~~~~~g------~-----~~~~~~~~~~~~~~~~i~~~  248 (365)
                      ...++|||.|+|. |..+-. +++......+.+++.+++-.+.++++-      +     ..++.     .|....+++ 
T Consensus        76 ~~pk~VLiiG~G~-G~~~~~-ll~~~~~~~v~~VEiD~~Vi~~a~~~f~~~~~~~~~d~rv~i~~-----~Da~~~l~~-  147 (312)
T d1uira_          76 PEPKRVLIVGGGE-GATLRE-VLKHPTVEKAVMVDIDGELVEVAKRHMPEWHQGAFDDPRAVLVI-----DDARAYLER-  147 (312)
T ss_dssp             SCCCEEEEEECTT-SHHHHH-HTTSTTCCEEEEEESCHHHHHHHHHHCHHHHTTGGGCTTEEEEE-----SCHHHHHHH-
T ss_pred             CCcceEEEeCCCc-hHHHHH-HHhcCCcceEEEecCCHHHHHHHHhcCcccccCccCCCceEEEE-----chHHHHhhh-
Confidence            3457999998754 555555 556656668999999999888877642      1     11222     244444433 


Q ss_pred             HHHhCCCceEEEe-C---CC---------CHHHHHHHHHhcccCCEEEEEc
Q 017868          249 QKAMGTGIDVSFD-C---AG---------LNKTMSTALGATCAGGKVCLVG  286 (365)
Q Consensus       249 ~~~~~~~~d~vid-~---~g---------~~~~~~~~~~~l~~~G~~~~~g  286 (365)
                         .+..+|+||- .   .+         +.+-+..+.++|+++|.++...
T Consensus       148 ---~~~~yDvIi~D~~dp~~~~~~~~~L~t~eF~~~~~~~L~p~Gvlv~~~  195 (312)
T d1uira_         148 ---TEERYDVVIIDLTDPVGEDNPARLLYTVEFYRLVKAHLNPGGVMGMQT  195 (312)
T ss_dssp             ---CCCCEEEEEEECCCCBSTTCGGGGGSSHHHHHHHHHTEEEEEEEEEEE
T ss_pred             ---cCCcccEEEEeCCCcccccchhhhhhhHHHHHHHHHhcCCCceEEEec
Confidence               3678999974 3   12         1245667889999999998764

>d1dusa_ c.66.1.4 (A:) Hypothetical protein MJ0882 {Archaeon Methanococcus jannaschii [TaxId: 2190]}

class: Alpha and beta proteins (a/b)
fold: S-adenosyl-L-methionine-dependent methyltransferases
superfamily: S-adenosyl-L-methionine-dependent methyltransferases
family: Hypothetical protein MJ0882
domain: Hypothetical protein MJ0882
species: Archaeon Methanococcus jannaschii [TaxId: 2190]

Probab=92.15  E-value=0.48  Score=36.28  Aligned_cols=99  Identities=16%  Similarity=0.288  Sum_probs=60.6

Q ss_pred             HHhcCCCCCCEEEEEcCCHHHHHHHHHHHHHCCCCeEEEEeCChhHHHHHHH----cCCC--EEEeCCCCcccHHHHHHH
Q 017868          174 CRRANIGPETNVLIMGAGPIGLVTMLGAPRAFGAPRIVIVDVDDYRLSVAKE----IGAD--NIVKVSTNLQDIAEEVEK  247 (365)
Q Consensus       174 ~~~~~~~~g~~vlI~G~g~~G~~ai~~l~~~~g~~~vi~v~~~~~~~~~~~~----~g~~--~~~~~~~~~~~~~~~i~~  247 (365)
                      ++.....++++||=.|+|. |..++. +++. +. .+.+++.++...+.+++    .+..  .+.....+..+   .+  
T Consensus        45 i~~l~~~~~~~VLDiGcG~-G~~~~~-la~~-~~-~v~~iD~s~~~i~~a~~n~~~~~l~~~~i~~~~~d~~~---~~--  115 (194)
T d1dusa_          45 VENVVVDKDDDILDLGCGY-GVIGIA-LADE-VK-STTMADINRRAIKLAKENIKLNNLDNYDIRVVHSDLYE---NV--  115 (194)
T ss_dssp             HHHCCCCTTCEEEEETCTT-SHHHHH-HGGG-SS-EEEEEESCHHHHHHHHHHHHHTTCTTSCEEEEECSTTT---TC--
T ss_pred             HHhCCcCCCCeEEEEeecC-ChhHHH-HHhh-cc-ccceeeeccccchhHHHHHHHhCCccceEEEEEcchhh---hh--
Confidence            3556788999999998754 555566 5543 44 78999999887766643    3332  12111111111   11  


Q ss_pred             HHHHhCCCceEEEeCC----CC---HHHHHHHHHhcccCCEEEEE
Q 017868          248 IQKAMGTGIDVSFDCA----GL---NKTMSTALGATCAGGKVCLV  285 (365)
Q Consensus       248 ~~~~~~~~~d~vid~~----g~---~~~~~~~~~~l~~~G~~~~~  285 (365)
                          ....+|+|+-..    +.   ...+..+.+.|+++|.+++.
T Consensus       116 ----~~~~fD~Ii~~~p~~~~~~~~~~~l~~~~~~LkpgG~l~i~  156 (194)
T d1dusa_         116 ----KDRKYNKIITNPPIRAGKEVLHRIIEEGKELLKDNGEIWVV  156 (194)
T ss_dssp             ----TTSCEEEEEECCCSTTCHHHHHHHHHHHHHHEEEEEEEEEE
T ss_pred             ----ccCCceEEEEcccEEecchhhhhHHHHHHHhcCcCcEEEEE
Confidence                146899998632    21   12456788899999998664

>d1orra_ c.2.1.2 (A:) CDP-tyvelose-2-epimerase {Salmonella typhi [TaxId: 90370]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Tyrosine-dependent oxidoreductases
domain: CDP-tyvelose-2-epimerase
species: Salmonella typhi [TaxId: 90370]

Probab=92.12  E-value=0.26  Score=41.14  Aligned_cols=74  Identities=22%  Similarity=0.265  Sum_probs=42.5

Q ss_pred             EEEEEcC-CHHHHHHHHHHHHHCCCCeEEEEeC--Ch---hHHHHHHHcCCCEEEeCCCCcccHHHHHHHHHHHhCCCce
Q 017868          184 NVLIMGA-GPIGLVTMLGAPRAFGAPRIVIVDV--DD---YRLSVAKEIGADNIVKVSTNLQDIAEEVEKIQKAMGTGID  257 (365)
Q Consensus       184 ~vlI~G~-g~~G~~ai~~l~~~~g~~~vi~v~~--~~---~~~~~~~~~g~~~~~~~~~~~~~~~~~i~~~~~~~~~~~d  257 (365)
                      +|||+|+ |-+|..++..| ...|. .|++++.  ..   ++.+.+...+--..+..+-  .+. +.+.+..+  +.++|
T Consensus         2 KILVTGatGfIGs~lv~~L-l~~g~-~V~~id~~~~~~~~~~~~~~~~~~~~~~i~~Di--~~~-~~l~~~~~--~~~~d   74 (338)
T d1orra_           2 KLLITGGCGFLGSNLASFA-LSQGI-DLIVFDNLSRKGATDNLHWLSSLGNFEFVHGDI--RNK-NDVTRLIT--KYMPD   74 (338)
T ss_dssp             EEEEETTTSHHHHHHHHHH-HHTTC-EEEEEECCCSTTHHHHHHHHHTTCCCEEEECCT--TCH-HHHHHHHH--HHCCS
T ss_pred             EEEEECCCcHHHHHHHHHH-HHCcC-EEEEEECCCcccchhHHHHhhccCCcEEEEccc--CCH-HHHHHHHH--hcCCc
Confidence            7999987 99999999945 45598 5666752  11   2333444444333333222  121 22333322  34689


Q ss_pred             EEEeCCC
Q 017868          258 VSFDCAG  264 (365)
Q Consensus       258 ~vid~~g  264 (365)
                      +||.+++
T Consensus        75 ~Vih~aa   81 (338)
T d1orra_          75 SCFHLAG   81 (338)
T ss_dssp             EEEECCC
T ss_pred             eEEeecc
Confidence            9999875

>d2b78a2 c.66.1.51 (A:69-385) Hypothetical protein SMu776, middle and C-terminal domains {Streptococcus mutans [TaxId: 1309]}

class: Alpha and beta proteins (a/b)
fold: S-adenosyl-L-methionine-dependent methyltransferases
superfamily: S-adenosyl-L-methionine-dependent methyltransferases
family: hypothetical RNA methyltransferase
domain: Hypothetical protein SMu776, middle and C-terminal domains
species: Streptococcus mutans [TaxId: 1309]

Probab=92.03  E-value=0.45  Score=39.71  Aligned_cols=102  Identities=15%  Similarity=0.063  Sum_probs=61.8

Q ss_pred             cCCCCCCEEEEEcC--CHHHHHHHHHHHHHCCCCeEEEEeCChhHHHHHHH----cCCC--EEEeCCCCcccHHHHHHHH
Q 017868          177 ANIGPETNVLIMGA--GPIGLVTMLGAPRAFGAPRIVIVDVDDYRLSVAKE----IGAD--NIVKVSTNLQDIAEEVEKI  248 (365)
Q Consensus       177 ~~~~~g~~vlI~G~--g~~G~~ai~~l~~~~g~~~vi~v~~~~~~~~~~~~----~g~~--~~~~~~~~~~~~~~~i~~~  248 (365)
                      ..+.+|++||=..+  |+.+.   . ++ ..|++.|+.++.++...+.+++    -+.+  .+-.+.   .|.-+.++..
T Consensus       140 ~~~~~g~~VLdlf~~~G~~sl---~-aa-~~ga~~V~~vD~s~~a~~~a~~N~~~n~l~~~~~~~i~---~d~~~~l~~~  211 (317)
T d2b78a2         140 NGSAAGKTVLNLFSYTAAFSV---A-AA-MGGAMATTSVDLAKRSRALSLAHFEANHLDMANHQLVV---MDVFDYFKYA  211 (317)
T ss_dssp             HTTTBTCEEEEETCTTTHHHH---H-HH-HTTBSEEEEEESCTTHHHHHHHHHHHTTCCCTTEEEEE---SCHHHHHHHH
T ss_pred             HHhhCCCceeecCCCCcHHHH---H-HH-hCCCceEEEecCCHHHHHHHHHHHHHhcccCcceEEEE---ccHHHHHHHH
Confidence            34678999988743  55554   3 32 3488889999999887766543    2332  111111   3444445444


Q ss_pred             HHHhCCCceEEEeC---CCC------------HHHHHHHHHhcccCCEEEEEcc
Q 017868          249 QKAMGTGIDVSFDC---AGL------------NKTMSTALGATCAGGKVCLVGM  287 (365)
Q Consensus       249 ~~~~~~~~d~vid~---~g~------------~~~~~~~~~~l~~~G~~~~~g~  287 (365)
                      .+ .+..+|+||--   .+.            ...+..++++|+++|.++....
T Consensus       212 ~~-~~~~fD~Ii~DPP~f~~~~~~~~~~~~~~~~L~~~a~~ll~pgG~l~~~sc  264 (317)
T d2b78a2         212 RR-HHLTYDIIIIDPPSFARNKKEVFSVSKDYHKLIRQGLEILSENGLIIASTN  264 (317)
T ss_dssp             HH-TTCCEEEEEECCCCC-----CCCCHHHHHHHHHHHHHHTEEEEEEEEEEEC
T ss_pred             Hh-hcCCCCEEEEcChhhccchhHHHHHHHHHHHHHHHHHHHcCCCCEEEEEeC
Confidence            33 25789999741   110            1355678889999999987654

>d1udca_ c.2.1.2 (A:) Uridine diphosphogalactose-4-epimerase (UDP-galactose 4-epimerase) {Escherichia coli [TaxId: 562]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Tyrosine-dependent oxidoreductases
domain: Uridine diphosphogalactose-4-epimerase (UDP-galactose 4-epimerase)
species: Escherichia coli [TaxId: 562]

Probab=92.00  E-value=0.29  Score=41.18  Aligned_cols=73  Identities=26%  Similarity=0.344  Sum_probs=41.2

Q ss_pred             EEEEEcC-CHHHHHHHHHHHHHCCCCeEEEEeC----ChhHHHHHHHc---CCCEEEeCCCCcccHHHHHHHHHHHhCCC
Q 017868          184 NVLIMGA-GPIGLVTMLGAPRAFGAPRIVIVDV----DDYRLSVAKEI---GADNIVKVSTNLQDIAEEVEKIQKAMGTG  255 (365)
Q Consensus       184 ~vlI~G~-g~~G~~ai~~l~~~~g~~~vi~v~~----~~~~~~~~~~~---g~~~~~~~~~~~~~~~~~i~~~~~~~~~~  255 (365)
                      +|||+|+ |-+|+.++..| ...|. .|+++++    ........+.+   ++.. +..+  -.+.. .+.+..+  ..+
T Consensus         2 KiLItG~tGfIG~~l~~~L-~~~g~-~V~~~d~~~~~~~~~~~~~~~~~~~~~~~-~~~D--l~d~~-~l~~~~~--~~~   73 (338)
T d1udca_           2 RVLVTGGSGYIGSHTCVQL-LQNGH-DVIILDNLCNSKRSVLPVIERLGGKHPTF-VEGD--IRNEA-LMTEILH--DHA   73 (338)
T ss_dssp             EEEEETTTSHHHHHHHHHH-HHTTC-EEEEEECCSSCCTTHHHHHHHHHTSCCEE-EECC--TTCHH-HHHHHHH--HTT
T ss_pred             EEEEECCCCHHHHHHHHHH-HHCcC-EEEEEECCCCcchhhHHHHHhhcCCCCEE-EEee--cCCHH-HHHHHHh--ccC
Confidence            6999987 99999999945 45688 4666653    22223332222   2322 2222  22322 2333322  257


Q ss_pred             ceEEEeCCC
Q 017868          256 IDVSFDCAG  264 (365)
Q Consensus       256 ~d~vid~~g  264 (365)
                      +|+||.+++
T Consensus        74 ~d~ViHlAa   82 (338)
T d1udca_          74 IDTVIHFAG   82 (338)
T ss_dssp             CSEEEECCS
T ss_pred             CCEEEECCC
Confidence            999999764

>d3cuma2 c.2.1.6 (A:1-162) Hydroxyisobutyrate dehydrogenase {Pseudomonas aeruginosa [TaxId: 287]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: 6-phosphogluconate dehydrogenase-like, N-terminal domain
domain: Hydroxyisobutyrate dehydrogenase
species: Pseudomonas aeruginosa [TaxId: 287]

Probab=91.92  E-value=0.98  Score=33.30  Aligned_cols=87  Identities=15%  Similarity=0.153  Sum_probs=58.0

Q ss_pred             EEEEEcCCHHHHHHHHHHHHHCCCCeEEEEeCChhHHHHHHHcCCCEEEeCCCCcccHHHHHHHHHHHhCCCceEEEeCC
Q 017868          184 NVLIMGAGPIGLVTMLGAPRAFGAPRIVIVDVDDYRLSVAKEIGADNIVKVSTNLQDIAEEVEKIQKAMGTGIDVSFDCA  263 (365)
Q Consensus       184 ~vlI~G~g~~G~~ai~~l~~~~g~~~vi~v~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~i~~~~~~~~~~~d~vid~~  263 (365)
                      +|.+.|.|.+|...+..|+ ..|+ .|.+.++++++.+.+.+.+.....       +..+    .    -...|+++-|+
T Consensus         3 kIg~IGlG~MG~~iA~~L~-~~g~-~v~~~d~~~~~~~~~~~~~~~~~~-------~~~e----~----~~~~diii~~v   65 (162)
T d3cuma2           3 QIAFIGLGHMGAPMATNLL-KAGY-LLNVFDLVQSAVDGLVAAGASAAR-------SARD----A----VQGADVVISML   65 (162)
T ss_dssp             EEEEECCSTTHHHHHHHHH-HTTC-EEEEECSSHHHHHHHHHTTCEECS-------SHHH----H----HTSCSEEEECC
T ss_pred             EEEEEEEHHHHHHHHHHHH-HCCC-eEEEEECchhhhhhhhhhhccccc-------hhhh----h----ccccCeeeecc
Confidence            6888999999998888454 4588 688889999999988888765321       1111    1    24678888888


Q ss_pred             CCHHHHHHH-------HHhcccCCEEEEEcc
Q 017868          264 GLNKTMSTA-------LGATCAGGKVCLVGM  287 (365)
Q Consensus       264 g~~~~~~~~-------~~~l~~~G~~~~~g~  287 (365)
                      .........       ...+.++-.++..+.
T Consensus        66 ~~~~~~~~v~~~~~~~~~~l~~g~iiid~st   96 (162)
T d3cuma2          66 PASQHVEGLYLDDDGLLAHIAPGTLVLECST   96 (162)
T ss_dssp             SCHHHHHHHHHSTTCHHHHSCTTCEEEECSC
T ss_pred             cchhhHHHHHhccccccccCCCCCEEEECCC
Confidence            766444432       334555555555543

>d1r0ka2 c.2.1.3 (A:3-126,A:265-290) 1-deoxy-D-xylulose-5-phosphate reductoisomerase {Zymomonas mobilis [TaxId: 542]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Glyceraldehyde-3-phosphate dehydrogenase-like, N-terminal domain
domain: 1-deoxy-D-xylulose-5-phosphate reductoisomerase
species: Zymomonas mobilis [TaxId: 542]

Probab=91.90  E-value=1.3  Score=32.27  Aligned_cols=96  Identities=19%  Similarity=0.190  Sum_probs=57.8

Q ss_pred             CEEEEEcC-CHHHHHHHHHHHHHC--CCCeEEEEeCChh---HHHHHHHcCCCEEEeCCCCcccHHHHHHHHH-------
Q 017868          183 TNVLIMGA-GPIGLVTMLGAPRAF--GAPRIVIVDVDDY---RLSVAKEIGADNIVKVSTNLQDIAEEVEKIQ-------  249 (365)
Q Consensus       183 ~~vlI~G~-g~~G~~ai~~l~~~~--g~~~vi~v~~~~~---~~~~~~~~g~~~~~~~~~~~~~~~~~i~~~~-------  249 (365)
                      .+|.|.|+ |.+|.-+++ +.+..  .+ .+++......   -.+.+++|.+..+...+..  . ...++...       
T Consensus         3 K~I~IlGsTGSIG~~tL~-Vi~~~~d~f-~v~~lsa~~N~~~L~~q~~ef~Pk~v~i~d~~--~-~~~l~~~~~~~~~~v   77 (150)
T d1r0ka2           3 RTVTVLGATGSIGHSTLD-LIERNLDRY-QVIALTANRNVKDLADAAKRTNAKRAVIADPS--L-YNDLKEALAGSSVEA   77 (150)
T ss_dssp             EEEEEETTTSHHHHHHHH-HHHHTGGGE-EEEEEEESSCHHHHHHHHHHTTCSEEEESCGG--G-HHHHHHHTTTCSSEE
T ss_pred             cEEEEECCCcHHHHHHHH-HHHcCCCCc-EEEEEEeCCCHHHHHHHHHhhccccceeccHH--H-HHHHHHHhhhccccc
Confidence            68999998 999999999 55443  35 4555544432   2356788898887764432  1 12222111       


Q ss_pred             --------HHhCCCceEEEeCCCCHHHHHHHHHhcccCCEEE
Q 017868          250 --------KAMGTGIDVSFDCAGLNKTMSTALGATCAGGKVC  283 (365)
Q Consensus       250 --------~~~~~~~d~vid~~g~~~~~~~~~~~l~~~G~~~  283 (365)
                              +.....+|+++.++.+...+.-.+.++..+-++.
T Consensus        78 ~~g~~~l~~~~~~~~D~vv~Ai~G~~GL~~tl~ai~~gk~ia  119 (150)
T d1r0ka2          78 AAGADALVEAAMMGADWTMAAIIGCAGLKATLAAIRKGKTVA  119 (150)
T ss_dssp             EESHHHHHHHHTSCCSEEEECCCSGGGHHHHHHHHHTTSEEE
T ss_pred             ccCccchheecccccceeeeecCchhHHHHHHHHHhcCCEEE
Confidence                    1113457777777665556666777776554443

>d2ahra2 c.2.1.6 (A:1-152) Pyrroline-5-carboxylate reductase ProC {Streptococcus pyogenes [TaxId: 1314]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: 6-phosphogluconate dehydrogenase-like, N-terminal domain
domain: Pyrroline-5-carboxylate reductase ProC
species: Streptococcus pyogenes [TaxId: 1314]

Probab=91.87  E-value=0.45  Score=34.91  Aligned_cols=84  Identities=12%  Similarity=0.116  Sum_probs=56.7

Q ss_pred             EEEEEcCCHHHHHHHHHHHHHCCCCeEEEEeCChhHHHH-HHHcCCCEEEeCCCCcccHHHHHHHHHHHhCCCceEEEeC
Q 017868          184 NVLIMGAGPIGLVTMLGAPRAFGAPRIVIVDVDDYRLSV-AKEIGADNIVKVSTNLQDIAEEVEKIQKAMGTGIDVSFDC  262 (365)
Q Consensus       184 ~vlI~G~g~~G~~ai~~l~~~~g~~~vi~v~~~~~~~~~-~~~~g~~~~~~~~~~~~~~~~~i~~~~~~~~~~~d~vid~  262 (365)
                      +|.+.|+|.+|.+.+.-+. ..|. .+++.+++.++.+. .+++|....       .+..+.+        ...|+||=|
T Consensus         2 kIg~IG~G~mG~al~~~l~-~~~~-~i~v~~r~~~~~~~l~~~~g~~~~-------~~~~~~~--------~~~dvIila   64 (152)
T d2ahra2           2 KIGIIGVGKMASAIIKGLK-QTPH-ELIISGSSLERSKEIAEQLALPYA-------MSHQDLI--------DQVDLVILG   64 (152)
T ss_dssp             EEEEECCSHHHHHHHHHHT-TSSC-EEEEECSSHHHHHHHHHHHTCCBC-------SSHHHHH--------HTCSEEEEC
T ss_pred             EEEEEeccHHHHHHHHHHH-hCCC-eEEEEcChHHhHHhhccccceeee-------chhhhhh--------hccceeeee
Confidence            5788999999999888454 4466 57777788877665 467786532       1222221        368999988


Q ss_pred             CCCHHHHHHHHHhcccCCEEEEE
Q 017868          263 AGLNKTMSTALGATCAGGKVCLV  285 (365)
Q Consensus       263 ~g~~~~~~~~~~~l~~~G~~~~~  285 (365)
                      +- +......+..+.++-.++.+
T Consensus        65 vk-p~~~~~vl~~l~~~~~iis~   86 (152)
T d2ahra2          65 IK-PQLFETVLKPLHFKQPIISM   86 (152)
T ss_dssp             SC-GGGHHHHHTTSCCCSCEEEC
T ss_pred             cc-hHhHHHHhhhcccceeEecc
Confidence            86 44666777777777666654

>d1zh8a1 c.2.1.3 (A:4-131,A:276-328) Hypothetical protein TM0312 {Thermotoga maritima [TaxId: 2336]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Glyceraldehyde-3-phosphate dehydrogenase-like, N-terminal domain
domain: Hypothetical protein TM0312
species: Thermotoga maritima [TaxId: 2336]

Probab=91.86  E-value=1  Score=33.87  Aligned_cols=131  Identities=11%  Similarity=0.023  Sum_probs=74.6

Q ss_pred             EEEEEcCCHHHHH-HHHHHHHHCC--CCeEEEEeCChhHHH-HHHHcCCCEEEeCCCCcccHHHHHHHHHHHhCCCceEE
Q 017868          184 NVLIMGAGPIGLV-TMLGAPRAFG--APRIVIVDVDDYRLS-VAKEIGADNIVKVSTNLQDIAEEVEKIQKAMGTGIDVS  259 (365)
Q Consensus       184 ~vlI~G~g~~G~~-ai~~l~~~~g--~~~vi~v~~~~~~~~-~~~~~g~~~~~~~~~~~~~~~~~i~~~~~~~~~~~d~v  259 (365)
                      +|.|.|+|.+|.- .+. ..+..+  ++.+.++++++++.+ +.++++.....      .++.+.+    +  ...+|.|
T Consensus         5 rigiIG~G~~g~~~h~~-~l~~~~~~~~i~~v~d~~~~~~~~~~~~~~~~~~~------~~~~ell----~--~~~id~v   71 (181)
T d1zh8a1           5 RLGIVGCGIAARELHLP-ALKNLSHLFEITAVTSRTRSHAEEFAKMVGNPAVF------DSYEELL----E--SGLVDAV   71 (181)
T ss_dssp             EEEEECCSHHHHHTHHH-HHHTTTTTEEEEEEECSSHHHHHHHHHHHSSCEEE------SCHHHHH----H--SSCCSEE
T ss_pred             EEEEEcCCHHHHHHHHH-HHHhCCCCeEEEEEEeccHhhhhhhhcccccccee------eeeeccc----c--cccccee
Confidence            6789999999974 455 444433  333335567676655 45778876543      2444333    2  4679999


Q ss_pred             EeCCCCHHHHHHHHHhcccCCEEEEEccCCCCccccchH---hh-hcCcEEEeecc--c---CCcHHHHHHHHHcCCC
Q 017868          260 FDCAGLNKTMSTALGATCAGGKVCLVGMGHHEMTVPLTP---AA-VREVDVVGVFR--Y---KNTWPLCLELLRSGKI  328 (365)
Q Consensus       260 id~~g~~~~~~~~~~~l~~~G~~~~~g~~~~~~~~~~~~---~~-~~~~~i~~~~~--~---~~~~~~~~~~l~~g~~  328 (365)
                      +-|+....+...+..++..+ .-+++.=+..........   +. .++..+.-.+.  +   ...+.++.+++++|.+
T Consensus        72 ~I~tp~~~h~~~~~~al~~g-k~V~~EKPl~~~~~e~~~l~~~~~~~~~~~~v~~~~R~~~~~~~~~~~~~~i~~G~i  148 (181)
T d1zh8a1          72 DLTLPVELNLPFIEKALRKG-VHVICEKPISTDVETGKKVVELSEKSEKTVYIAENFRENSYQKEFEDFYQVVAEGKP  148 (181)
T ss_dssp             EECCCGGGHHHHHHHHHHTT-CEEEEESSSSSSHHHHHHHHHHHHHCSSCEEEECGGGCCHHHHHHHHHHHHHHSCCC
T ss_pred             eccccccccccccccccccc-hhhhcCCCCcCCHHHHHHHHHHHHHhCCeEEEEeeccccccCHHHHHHHHHHHCCCC
Confidence            99988777777787777755 555553111111111111   11 12333322222  1   2456788899999988

>d1kjqa2 c.30.1.1 (A:2-112) Glycinamide ribonucleotide transformylase PurT, N-domain {Escherichia coli [TaxId: 562]}

class: Alpha and beta proteins (a/b)
fold: PreATP-grasp domain
superfamily: PreATP-grasp domain
family: BC N-terminal domain-like
domain: Glycinamide ribonucleotide transformylase PurT, N-domain
species: Escherichia coli [TaxId: 562]

Probab=91.83  E-value=0.15  Score=35.51  Aligned_cols=37  Identities=24%  Similarity=0.496  Sum_probs=30.2

Q ss_pred             CCC-CEEEEEcCCHHHHHHHHHHHHHCCCCeEEEEeCChh
Q 017868          180 GPE-TNVLIMGAGPIGLVTMLGAPRAFGAPRIVIVDVDDY  218 (365)
Q Consensus       180 ~~g-~~vlI~G~g~~G~~ai~~l~~~~g~~~vi~v~~~~~  218 (365)
                      .++ .+|.|.|+|-+|.++++ .++.+|+ .+++.+.+++
T Consensus         8 ~~~~~kigIlGgGQL~rMla~-aA~~lG~-~v~v~d~~~~   45 (111)
T d1kjqa2           8 RPAATRVMLLGSGELGKEVAI-ECQRLGV-EVIAVDRYAD   45 (111)
T ss_dssp             STTCCEEEEESCSHHHHHHHH-HHHTTTC-EEEEEESSTT
T ss_pred             CCCCCEEEEEeCCHHHHHHHH-HHHHCCC-EEEEEcCCCC
Confidence            444 56999999999999999 9999999 5677776554

>d3etja2 c.30.1.1 (A:1-78) N5-carboxyaminoimidazole ribonucleotide synthetase PurK (AIRC), N-domain {Escherichia coli [TaxId: 562]}

class: Alpha and beta proteins (a/b)
fold: PreATP-grasp domain
superfamily: PreATP-grasp domain
family: BC N-terminal domain-like
domain: N5-carboxyaminoimidazole ribonucleotide synthetase PurK (AIRC), N-domain
species: Escherichia coli [TaxId: 562]

Probab=91.79  E-value=0.08  Score=34.16  Aligned_cols=33  Identities=24%  Similarity=0.423  Sum_probs=27.8

Q ss_pred             CEEEEEcCCHHHHHHHHHHHHHCCCCeEEEEeCCh
Q 017868          183 TNVLIMGAGPIGLVTMLGAPRAFGAPRIVIVDVDD  217 (365)
Q Consensus       183 ~~vlI~G~g~~G~~ai~~l~~~~g~~~vi~v~~~~  217 (365)
                      ++|.|.|+|-+|.+.++ .++.+|+ .+.+.+.++
T Consensus         2 k~vgIlG~GQLgrMl~~-Aa~~LG~-~v~vldp~~   34 (78)
T d3etja2           2 KQVCVLGNGQLGRMLRQ-AGEPLGI-AVWPVGLDA   34 (78)
T ss_dssp             EEEEEEBCSHHHHHHHH-HHGGGTE-EEEEECTTS
T ss_pred             CEEEEEcCCHHHHHHHH-HHHHcCC-EEEEEcCCC
Confidence            47899999999999999 9999999 566766544

>d1e7wa_ c.2.1.2 (A:) Dihydropteridin reductase (pteridine reductase) {Leishmania major [TaxId: 5664]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Tyrosine-dependent oxidoreductases
domain: Dihydropteridin reductase (pteridine reductase)
species: Leishmania major [TaxId: 5664]

Probab=91.78  E-value=0.22  Score=40.71  Aligned_cols=37  Identities=19%  Similarity=0.118  Sum_probs=25.2

Q ss_pred             EEEEEcC-CHHHHHHHHHHHHHCCCCeEEEEeCChhHHH
Q 017868          184 NVLIMGA-GPIGLVTMLGAPRAFGAPRIVIVDVDDYRLS  221 (365)
Q Consensus       184 ~vlI~G~-g~~G~~ai~~l~~~~g~~~vi~v~~~~~~~~  221 (365)
                      .+||+|+ +++|.++++.|+ ..|+++++...+++++.+
T Consensus         4 VAlITGas~GIG~aiA~~la-~~Ga~V~i~~~~~~~~~~   41 (284)
T d1e7wa_           4 VALVTGAAKRLGRSIAEGLH-AEGYAVCLHYHRSAAEAN   41 (284)
T ss_dssp             EEEETTCSSHHHHHHHHHHH-HTTCEEEEEESSCHHHHH
T ss_pred             EEEEeCCCCHHHHHHHHHHH-HcCCEEEEEeCCCHHHHH
Confidence            3577787 899999999555 569965555555555443

>d1ri5a_ c.66.1.34 (A:) mRNA cap (Guanine N-7) methyltransferase {Fungus (Encephalitozoon cuniculi) [TaxId: 6035]}

class: Alpha and beta proteins (a/b)
fold: S-adenosyl-L-methionine-dependent methyltransferases
superfamily: S-adenosyl-L-methionine-dependent methyltransferases
family: mRNA cap (Guanine N-7) methyltransferase
domain: mRNA cap (Guanine N-7) methyltransferase
species: Fungus (Encephalitozoon cuniculi) [TaxId: 6035]

Probab=91.77  E-value=0.51  Score=37.78  Aligned_cols=95  Identities=17%  Similarity=0.183  Sum_probs=59.5

Q ss_pred             CCCCCEEEEEcCCHHHHHHHHHHHHHCCCCeEEEEeCChhHHHHHHH----cCCC-EE--EeCCCCcccHHHHHHHHHHH
Q 017868          179 IGPETNVLIMGAGPIGLVTMLGAPRAFGAPRIVIVDVDDYRLSVAKE----IGAD-NI--VKVSTNLQDIAEEVEKIQKA  251 (365)
Q Consensus       179 ~~~g~~vlI~G~g~~G~~ai~~l~~~~g~~~vi~v~~~~~~~~~~~~----~g~~-~~--~~~~~~~~~~~~~i~~~~~~  251 (365)
                      ++++++||=.|+|. |..+.. +++. |...++++|.+++..+.+++    .+.. .+  +..+.....+         .
T Consensus        22 ~~~~~~VLDlGCG~-G~~~~~-~~~~-~~~~v~GiD~S~~~l~~A~~r~~~~~~~~~v~f~~~D~~~~~~---------~   89 (252)
T d1ri5a_          22 TKRGDSVLDLGCGK-GGDLLK-YERA-GIGEYYGVDIAEVSINDARVRARNMKRRFKVFFRAQDSYGRHM---------D   89 (252)
T ss_dssp             CCTTCEEEEETCTT-TTTHHH-HHHH-TCSEEEEEESCHHHHHHHHHHHHTSCCSSEEEEEESCTTTSCC---------C
T ss_pred             CCCcCEEEEecccC-cHHHHH-HHHc-CCCeEEEecCCHHHHHHHHHHHHhcCCCcceEEEEcchhhhcc---------c
Confidence            57899999999865 555666 6555 76689999999998777654    3322 21  1111100110         0


Q ss_pred             hCCCceEEEeCCCC------H----HHHHHHHHhcccCCEEEEE
Q 017868          252 MGTGIDVSFDCAGL------N----KTMSTALGATCAGGKVCLV  285 (365)
Q Consensus       252 ~~~~~d~vid~~g~------~----~~~~~~~~~l~~~G~~~~~  285 (365)
                      .+..+|+|+.....      .    ..+..+.++|+++|.++..
T Consensus        90 ~~~~fD~V~~~~~l~~~~~~~~~~~~~l~~i~~~Lk~gG~~i~~  133 (252)
T d1ri5a_          90 LGKEFDVISSQFSFHYAFSTSESLDIAQRNIARHLRPGGYFIMT  133 (252)
T ss_dssp             CSSCEEEEEEESCGGGGGSSHHHHHHHHHHHHHTEEEEEEEEEE
T ss_pred             ccccceEEEEcceeeecCCCHHHHHHHHHHHhceeCCCCEEEEE
Confidence            14679999864331      1    2445677889999998764

>d1y7la1 c.79.1.1 (A:2-311) O-acetylserine sulfhydrylase (Cysteine synthase) {Haemophilus influenzae [TaxId: 727]}

class: Alpha and beta proteins (a/b)
fold: Tryptophan synthase beta subunit-like PLP-dependent enzymes
superfamily: Tryptophan synthase beta subunit-like PLP-dependent enzymes
family: Tryptophan synthase beta subunit-like PLP-dependent enzymes
domain: O-acetylserine sulfhydrylase (Cysteine synthase)
species: Haemophilus influenzae [TaxId: 727]

Probab=91.68  E-value=1.7  Score=35.81  Aligned_cols=57  Identities=11%  Similarity=0.142  Sum_probs=43.8

Q ss_pred             HhcCCCCCCEEEEEcCCHHHHHHHHHHHHHCCCCeEEEEeCC--hhHHHHHHHcCCCEEE
Q 017868          175 RRANIGPETNVLIMGAGPIGLVTMLGAPRAFGAPRIVIVDVD--DYRLSVAKEIGADNIV  232 (365)
Q Consensus       175 ~~~~~~~g~~vlI~G~g~~G~~ai~~l~~~~g~~~vi~v~~~--~~~~~~~~~~g~~~~~  232 (365)
                      +...+.++++|+...+|.-|++++. .++.+|.+.++++...  ..|.+.++.+|+..+.
T Consensus        54 ~~g~~~~~~~vv~~SsGN~g~a~A~-~a~~~G~~~~i~~p~~~~~~k~~~~~~~GA~vv~  112 (310)
T d1y7la1          54 KDGTLTKGKEIVDATSGNTGIALAY-VAAARGYKITLTMPETMSLERKRLLCGLGVNLVL  112 (310)
T ss_dssp             HTTSSCTTCEEEESCCSHHHHHHHH-HHHHHTCCEEEEEETTSCHHHHHHHHHTTCEEEE
T ss_pred             HcCCCCCCceeeeecCCCchHHHHH-HHHHhhccccccchhhhhhhhhhhHHHhCCceEe
Confidence            4456678877666677999999999 9999999877777443  4677888999987654

>d2fcaa1 c.66.1.53 (A:10-213) tRNA (guanine-N(7)-)-methyltransferase TrmB {Bacillus subtilis [TaxId: 1423]}

class: Alpha and beta proteins (a/b)
fold: S-adenosyl-L-methionine-dependent methyltransferases
superfamily: S-adenosyl-L-methionine-dependent methyltransferases
family: TrmB-like
domain: tRNA (guanine-N(7)-)-methyltransferase TrmB
species: Bacillus subtilis [TaxId: 1423]

Probab=91.59  E-value=1.1  Score=34.62  Aligned_cols=95  Identities=8%  Similarity=0.071  Sum_probs=62.6

Q ss_pred             CEEEEEcCCHHHHHHHHHHHHHCCCCeEEEEeCChhHHH----HHHHcCCCEEEeCCCCcccHHHHHHHHHHHhCCCceE
Q 017868          183 TNVLIMGAGPIGLVTMLGAPRAFGAPRIVIVDVDDYRLS----VAKEIGADNIVKVSTNLQDIAEEVEKIQKAMGTGIDV  258 (365)
Q Consensus       183 ~~vlI~G~g~~G~~ai~~l~~~~g~~~vi~v~~~~~~~~----~~~~~g~~~~~~~~~~~~~~~~~i~~~~~~~~~~~d~  258 (365)
                      ..||=+|+|. |..++. +|+...-..+++++.+.....    .+++.+.+.+.....+..++.+    .  .....+|.
T Consensus        31 PlvLeIGcG~-G~~~~~-lA~~~p~~~~iGiD~~~~~i~~a~~~~~~~~l~Nv~~~~~Da~~l~~----~--~~~~~~d~  102 (204)
T d2fcaa1          31 PIHIEVGTGK-GQFISG-MAKQNPDINYIGIELFKSVIVTAVQKVKDSEAQNVKLLNIDADTLTD----V--FEPGEVKR  102 (204)
T ss_dssp             CEEEEECCTT-SHHHHH-HHHHCTTSEEEEECSCHHHHHHHHHHHHHSCCSSEEEECCCGGGHHH----H--CCTTSCCE
T ss_pred             ceEEEEEecC-cHHHHH-HHHhCCCCcEEEeecchHHHHHHHHHHHHHhccCchhcccchhhhhc----c--cCchhhhc
Confidence            3455578865 888888 777765558999999887654    3556787765544444333321    1  12456787


Q ss_pred             EEeCCCC--------------HHHHHHHHHhcccCCEEEEE
Q 017868          259 SFDCAGL--------------NKTMSTALGATCAGGKVCLV  285 (365)
Q Consensus       259 vid~~g~--------------~~~~~~~~~~l~~~G~~~~~  285 (365)
                      |+-....              +..+....+.|+++|.+.+.
T Consensus       103 v~i~fp~P~~k~~h~k~Rl~~~~~l~~~~r~LkpgG~l~i~  143 (204)
T d2fcaa1         103 VYLNFSDPWPKKRHEKRRLTYSHFLKKYEEVMGKGGSIHFK  143 (204)
T ss_dssp             EEEESCCCCCSGGGGGGSTTSHHHHHHHHHHHTTSCEEEEE
T ss_pred             cccccccccchhhhcchhhhHHHHHHHHHHhCCCCcEEEEE
Confidence            7653322              35777888999999998775

>d1ks9a2 c.2.1.6 (A:1-167) Ketopantoate reductase PanE {Escherichia coli [TaxId: 562]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: 6-phosphogluconate dehydrogenase-like, N-terminal domain
domain: Ketopantoate reductase PanE
species: Escherichia coli [TaxId: 562]

Probab=91.48  E-value=0.044  Score=41.17  Aligned_cols=92  Identities=8%  Similarity=0.014  Sum_probs=50.1

Q ss_pred             EEEEEcCCHHHHHHHHHHHHHCCCCeEEEEeCChhHHHHHHHcCCCEEEeCCCCcccHHHHHHHHHHHhCCCceEEEeCC
Q 017868          184 NVLIMGAGPIGLVTMLGAPRAFGAPRIVIVDVDDYRLSVAKEIGADNIVKVSTNLQDIAEEVEKIQKAMGTGIDVSFDCA  263 (365)
Q Consensus       184 ~vlI~G~g~~G~~ai~~l~~~~g~~~vi~v~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~i~~~~~~~~~~~d~vid~~  263 (365)
                      +|+|+|+|.+|.+.+..| ...|. .|..+++++++.+.....+............+..+.        -..+|++|-++
T Consensus         2 kI~IiGaG~iG~~~a~~L-~~~G~-~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~~~~~--------~~~~D~iii~v   71 (167)
T d1ks9a2           2 KITVLGCGALGQLWLTAL-CKQGH-EVQGWLRVPQPYCSVNLVETDGSIFNESLTANDPDF--------LATSDLLLVTL   71 (167)
T ss_dssp             EEEEECCSHHHHHHHHHH-HHTTC-EEEEECSSCCSEEEEEEECTTSCEEEEEEEESCHHH--------HHTCSEEEECS
T ss_pred             EEEEECcCHHHHHHHHHH-HHCCC-ceEEEEcCHHHhhhhccccCCccccccccccchhhh--------hcccceEEEee
Confidence            689999999999888845 45688 567777766543322222211100000000111111        14689999988


Q ss_pred             CCHH---HHHHHHHhcccCCEEEEE
Q 017868          264 GLNK---TMSTALGATCAGGKVCLV  285 (365)
Q Consensus       264 g~~~---~~~~~~~~l~~~G~~~~~  285 (365)
                      -...   .+......+.++..++.+
T Consensus        72 ka~~~~~~~~~l~~~~~~~~~Iv~~   96 (167)
T d1ks9a2          72 KAWQVSDAVKSLASTLPVTTPILLI   96 (167)
T ss_dssp             CGGGHHHHHHHHHTTSCTTSCEEEE
T ss_pred             cccchHHHHHhhccccCcccEEeec
Confidence            7542   222333455556666665

>d1rkxa_ c.2.1.2 (A:) CDP-glucose-4,6-dehydratase {Yersinia pseudotuberculosis [TaxId: 633]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Tyrosine-dependent oxidoreductases
domain: CDP-glucose-4,6-dehydratase
species: Yersinia pseudotuberculosis [TaxId: 633]

Probab=91.48  E-value=0.07  Score=45.42  Aligned_cols=78  Identities=14%  Similarity=0.079  Sum_probs=45.5

Q ss_pred             CCCEEEEEcC-CHHHHHHHHHHHHHCCCCeEEEEeCChhHH-HHHHHcC---CCEEEeCCCCcccHHHHHHHHHHHhCCC
Q 017868          181 PETNVLIMGA-GPIGLVTMLGAPRAFGAPRIVIVDVDDYRL-SVAKEIG---ADNIVKVSTNLQDIAEEVEKIQKAMGTG  255 (365)
Q Consensus       181 ~g~~vlI~G~-g~~G~~ai~~l~~~~g~~~vi~v~~~~~~~-~~~~~~g---~~~~~~~~~~~~~~~~~i~~~~~~~~~~  255 (365)
                      .+.+|||+|+ |-+|..+++ .+...|+ .|.++++...+. .+.+...   .-..+..+-  .+.. .+.+..+  ...
T Consensus         7 ~~KkILVTG~tGfIGs~lv~-~Ll~~g~-~V~~~~r~~~~~~~~~~~~~~~~~i~~~~~Dl--~d~~-~l~~~~~--~~~   79 (356)
T d1rkxa_           7 QGKRVFVTGHTGFKGGWLSL-WLQTMGA-TVKGYSLTAPTVPSLFETARVADGMQSEIGDI--RDQN-KLLESIR--EFQ   79 (356)
T ss_dssp             TTCEEEEETTTSHHHHHHHH-HHHHTTC-EEEEEESSCSSSSCHHHHTTTTTTSEEEECCT--TCHH-HHHHHHH--HHC
T ss_pred             CCCEEEEECCCCHHHHHHHH-HHHHCCC-EEEEEECCCCccHHHHhhhhcccCCeEEEeec--cChH-hhhhhhh--hch
Confidence            4689999987 899999999 5566799 577777765432 2223221   122222221  2222 2222222  356


Q ss_pred             ceEEEeCCCC
Q 017868          256 IDVSFDCAGL  265 (365)
Q Consensus       256 ~d~vid~~g~  265 (365)
                      +|+++.+++.
T Consensus        80 ~~~v~~~aa~   89 (356)
T d1rkxa_          80 PEIVFHMAAQ   89 (356)
T ss_dssp             CSEEEECCSC
T ss_pred             hhhhhhhhcc
Confidence            7889887763

>d1oria_ c.66.1.6 (A:) Protein arginine N-methyltransferase 1, PRMT1 {Rat (Rattus norvegicus) [TaxId: 10116]}

class: Alpha and beta proteins (a/b)
fold: S-adenosyl-L-methionine-dependent methyltransferases
superfamily: S-adenosyl-L-methionine-dependent methyltransferases
family: Arginine methyltransferase
domain: Protein arginine N-methyltransferase 1, PRMT1
species: Rat (Rattus norvegicus) [TaxId: 10116]

Probab=91.37  E-value=0.25  Score=41.33  Aligned_cols=95  Identities=16%  Similarity=0.283  Sum_probs=54.8

Q ss_pred             CCCCCCEEEEEcCCHHHHHHHHHHHHHCCCCeEEEEeCChhHH---HHHHHcCCCE-EEeCCCCcccHHHHHHHHHHHhC
Q 017868          178 NIGPETNVLIMGAGPIGLVTMLGAPRAFGAPRIVIVDVDDYRL---SVAKEIGADN-IVKVSTNLQDIAEEVEKIQKAMG  253 (365)
Q Consensus       178 ~~~~g~~vlI~G~g~~G~~ai~~l~~~~g~~~vi~v~~~~~~~---~~~~~~g~~~-~~~~~~~~~~~~~~i~~~~~~~~  253 (365)
                      .+.+|++||-.|+|. |..++. +++ .|+++|++++.++.-.   +.+++-+... +.....+..++.        ...
T Consensus        30 ~~~~~~~VLDiGcG~-G~ls~~-aa~-~Ga~~V~avd~s~~~~~a~~~~~~n~~~~~v~~~~~~~~~~~--------~~~   98 (316)
T d1oria_          30 HLFKDKVVLDVGSGT-GILCMF-AAK-AGARKVIGIECSSISDYAVKIVKANKLDHVVTIIKGKVEEVE--------LPV   98 (316)
T ss_dssp             HHHTTCEEEEETCTT-SHHHHH-HHH-TTCSEEEEEECSTTHHHHHHHHHHTTCTTTEEEEESCTTTCC--------CSS
T ss_pred             ccCCcCEEEEEecCC-cHHHHH-HHH-hCCCEEEEEcCcHHHhhhhhHHHHhCCccccceEeccHHHcc--------ccc
Confidence            356889999998864 555555 554 5888899999876432   2334444322 211112222210        114


Q ss_pred             CCceEEEeCC-C----C----HHHHHHHHHhcccCCEEE
Q 017868          254 TGIDVSFDCA-G----L----NKTMSTALGATCAGGKVC  283 (365)
Q Consensus       254 ~~~d~vid~~-g----~----~~~~~~~~~~l~~~G~~~  283 (365)
                      ..+|+|+... +    .    +..+...-+.|+++|.++
T Consensus        99 ~~~D~ivs~~~~~~l~~e~~~~~~l~~~~r~Lkp~G~ii  137 (316)
T d1oria_          99 EKVDIIISEWMGYCLFYESMLNTVLHARDKWLAPDGLIF  137 (316)
T ss_dssp             SCEEEEEECCCBBTBTBTCCHHHHHHHHHHHEEEEEEEE
T ss_pred             ceeEEEeeeeeeeeeccHHHHHHHHHHHHhcCCCCeEEE
Confidence            6799997522 1    1    234445667899999876

>d1xeaa1 c.2.1.3 (A:2-122,A:267-312) Putative oxidoreductase VCA1048 {Vibrio cholerae [TaxId: 666]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Glyceraldehyde-3-phosphate dehydrogenase-like, N-terminal domain
domain: Putative oxidoreductase VCA1048
species: Vibrio cholerae [TaxId: 666]

Probab=91.35  E-value=0.28  Score=36.61  Aligned_cols=130  Identities=15%  Similarity=0.114  Sum_probs=73.1

Q ss_pred             EEEEEcCCHHHHH-HHHHHHHHCCCCeEEEEeCChhHHH-HHHHcCCCEEEeCCCCcccHHHHHHHHHHHhCCCceEEEe
Q 017868          184 NVLIMGAGPIGLV-TMLGAPRAFGAPRIVIVDVDDYRLS-VAKEIGADNIVKVSTNLQDIAEEVEKIQKAMGTGIDVSFD  261 (365)
Q Consensus       184 ~vlI~G~g~~G~~-ai~~l~~~~g~~~vi~v~~~~~~~~-~~~~~g~~~~~~~~~~~~~~~~~i~~~~~~~~~~~d~vid  261 (365)
                      +|.|.|+|.+|.. .+..+.+.-+. .+++++.++++.+ +.++++.....      .++.+.+       ...+|+|+-
T Consensus         3 rvgiiG~G~~~~~~~~~~l~~~~~~-~~~~~d~~~~~~~~~~~~~~~~~~~------~~~~~ll-------~~~iD~V~I   68 (167)
T d1xeaa1           3 KIAMIGLGDIAQKAYLPVLAQWPDI-ELVLCTRNPKVLGTLATRYRVSATC------TDYRDVL-------QYGVDAVMI   68 (167)
T ss_dssp             EEEEECCCHHHHHTHHHHHTTSTTE-EEEEECSCHHHHHHHHHHTTCCCCC------SSTTGGG-------GGCCSEEEE
T ss_pred             EEEEEcCCHHHHHHHHHHHHhCCCc-EEEEEECCHHHHHHHHHhccccccc------ccHHHhc-------ccccceecc
Confidence            6789999999964 56634344355 4567777777665 45668865432      1222211       236899999


Q ss_pred             CCCCHHHHHHHHHhcccCCEEEEEccCCCCccccchH----hhhcCcEE-EeecccCCcHHHHHHHHHcCCC
Q 017868          262 CAGLNKTMSTALGATCAGGKVCLVGMGHHEMTVPLTP----AAVREVDV-VGVFRYKNTWPLCLELLRSGKI  328 (365)
Q Consensus       262 ~~g~~~~~~~~~~~l~~~G~~~~~g~~~~~~~~~~~~----~~~~~~~i-~~~~~~~~~~~~~~~~l~~g~~  328 (365)
                      |+....+.+.+..++..+ .-+++.=+..........    .-.++..+ .+...+...+.++.+.+..|++
T Consensus        69 ~tp~~~H~~~~~~al~~g-k~V~~EKP~~~~~~e~~~l~~~a~~~~~~~~vg~~r~~~~~~~~~~~~~~G~i  139 (167)
T d1xeaa1          69 HAATDVHSTLAAFFLHLG-IPTFVDKPLAASAQECENLYELAEKHHQPLYVGFNGFDAMVQDWLQVAAAGKL  139 (167)
T ss_dssp             CSCGGGHHHHHHHHHHTT-CCEEEESCSCSSHHHHHHHHHHHHHTTCCEEEECGTHHHHHHHHHHHHHHTCC
T ss_pred             cccccccccccccccccc-cccccCCCCcCCHHHHHHHHHHHHHcCCEEEEEeCcCCHHHHHHHHHhhcCCC
Confidence            998887888888888865 445543111111111111    11222222 2322223446677777777877

>d1vm6a3 c.2.1.3 (A:1-96,A:183-214) Dihydrodipicolinate reductase {Thermotoga maritima [TaxId: 2336]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Glyceraldehyde-3-phosphate dehydrogenase-like, N-terminal domain
domain: Dihydrodipicolinate reductase
species: Thermotoga maritima [TaxId: 2336]

Probab=91.21  E-value=0.95  Score=32.01  Aligned_cols=30  Identities=23%  Similarity=0.221  Sum_probs=23.8

Q ss_pred             EEEEEcC-CHHHHHHHHHHHHHCCCCeEEEEe
Q 017868          184 NVLIMGA-GPIGLVTMLGAPRAFGAPRIVIVD  214 (365)
Q Consensus       184 ~vlI~G~-g~~G~~ai~~l~~~~g~~~vi~v~  214 (365)
                      +|.|+|+ |-+|++..+ ++...+.+.+..++
T Consensus         2 ki~i~G~~GrMG~~i~~-~~~~~~~~l~~~id   32 (128)
T d1vm6a3           2 KYGIVGYSGRMGQEIQK-VFSEKGHELVLKVD   32 (128)
T ss_dssp             EEEEETTTSHHHHHHHH-HHHHTTCEEEEEEE
T ss_pred             EEEEECCCCHHHHHHHH-HHhcCCCeEEEEEC
Confidence            6889997 999999998 77777886555554

>d1y8ca_ c.66.1.43 (A:) Putative methyltransferase CAC2371 {Clostridium acetobutylicum [TaxId: 1488]}

class: Alpha and beta proteins (a/b)
fold: S-adenosyl-L-methionine-dependent methyltransferases
superfamily: S-adenosyl-L-methionine-dependent methyltransferases
family: CAC2371-like
domain: Putative methyltransferase CAC2371
species: Clostridium acetobutylicum [TaxId: 1488]

Probab=91.19  E-value=0.38  Score=38.33  Aligned_cols=91  Identities=16%  Similarity=0.142  Sum_probs=57.9

Q ss_pred             CCCCEEEEEcCCHHHHHHHHHHHHHCCCCeEEEEeCChhHHHHHHH----cCCCEEEeCCCCcccHHHHHHHHHHHhCCC
Q 017868          180 GPETNVLIMGAGPIGLVTMLGAPRAFGAPRIVIVDVDDYRLSVAKE----IGADNIVKVSTNLQDIAEEVEKIQKAMGTG  255 (365)
Q Consensus       180 ~~g~~vlI~G~g~~G~~ai~~l~~~~g~~~vi~v~~~~~~~~~~~~----~g~~~~~~~~~~~~~~~~~i~~~~~~~~~~  255 (365)
                      .++.+||=.|+|. |..+.. +++. |. .++++|.+++-.+.+++    .+...-+. ..+-.++         ...+.
T Consensus        36 ~~~~~vLDiGCG~-G~~~~~-l~~~-g~-~v~GvD~S~~ml~~A~~~~~~~~~~v~~~-~~d~~~~---------~~~~~  101 (246)
T d1y8ca_          36 LVFDDYLDLACGT-GNLTEN-LCPK-FK-NTWAVDLSQEMLSEAENKFRSQGLKPRLA-CQDISNL---------NINRK  101 (246)
T ss_dssp             CCTTEEEEETCTT-STTHHH-HGGG-SS-EEEEECSCHHHHHHHHHHHHHTTCCCEEE-CCCGGGC---------CCSCC
T ss_pred             CCCCeEEEEeCcC-CHHHHH-HHHh-CC-ccEeeccchhhhhhccccccccCccceee-ccchhhh---------ccccc
Confidence            4557899999864 777777 7654 77 69999999987766543    34322121 1211111         01468


Q ss_pred             ceEEEeCCCC------H----HHHHHHHHhcccCCEEEE
Q 017868          256 IDVSFDCAGL------N----KTMSTALGATCAGGKVCL  284 (365)
Q Consensus       256 ~d~vid~~g~------~----~~~~~~~~~l~~~G~~~~  284 (365)
                      +|+|+...+.      .    ..+..+.++|+++|.+++
T Consensus       102 fD~i~~~~~~~~~~~~~~~~~~~l~~~~~~LkpgG~~i~  140 (246)
T d1y8ca_         102 FDLITCCLDSTNYIIDSDDLKKYFKAVSNHLKEGGVFIF  140 (246)
T ss_dssp             EEEEEECTTGGGGCCSHHHHHHHHHHHHTTEEEEEEEEE
T ss_pred             ccccceeeeeeeccCCHHHHHHHHHHHHHhCCCCeEEEE
Confidence            9999864321      1    256678889999999875

>d1h6da1 c.2.1.3 (A:51-212,A:375-433) Glucose-fructose oxidoreductase, N-terminal domain {Zymomonas mobilis [TaxId: 542]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Glyceraldehyde-3-phosphate dehydrogenase-like, N-terminal domain
domain: Glucose-fructose oxidoreductase, N-terminal domain
species: Zymomonas mobilis [TaxId: 542]

Probab=91.05  E-value=0.2  Score=39.57  Aligned_cols=91  Identities=22%  Similarity=0.202  Sum_probs=59.3

Q ss_pred             EEEEEcCCHHHH-HHHHHHHHHCCCCeEEEEeCChhHHH-HHHHcCCCE--EEeCCCCcccHHHHHHHHHHHhCCCceEE
Q 017868          184 NVLIMGAGPIGL-VTMLGAPRAFGAPRIVIVDVDDYRLS-VAKEIGADN--IVKVSTNLQDIAEEVEKIQKAMGTGIDVS  259 (365)
Q Consensus       184 ~vlI~G~g~~G~-~ai~~l~~~~g~~~vi~v~~~~~~~~-~~~~~g~~~--~~~~~~~~~~~~~~i~~~~~~~~~~~d~v  259 (365)
                      +|.|.|+|.+|. ..+..+.+.-+++.+.++++++++.+ ++++++...  +..++    ++.+.+.      ...+|+|
T Consensus        35 riaiIG~G~~~~~~~~~~~~~~~~~~ivav~d~~~~~a~~~~~~~~i~~~~~~~~~----d~~ell~------~~~iD~V  104 (221)
T d1h6da1          35 GYAIVGLGKYALNQILPGFAGCQHSRIEALVSGNAEKAKIVAAEYGVDPRKIYDYS----NFDKIAK------DPKIDAV  104 (221)
T ss_dssp             EEEEECCSHHHHHTHHHHTTTCSSEEEEEEECSCHHHHHHHHHHTTCCGGGEECSS----SGGGGGG------CTTCCEE
T ss_pred             EEEEEcCcHHHHHHHHHHHHhCCCceEEEEecCCHHHHHHHHHhhccccccccccC----chhhhcc------cccceee
Confidence            578889999986 44553444457765666677777754 567787642  22222    2322221      4579999


Q ss_pred             EeCCCCHHHHHHHHHhcccCCEEEEE
Q 017868          260 FDCAGLNKTMSTALGATCAGGKVCLV  285 (365)
Q Consensus       260 id~~g~~~~~~~~~~~l~~~G~~~~~  285 (365)
                      +-++....+...+..++..+ .-+++
T Consensus       105 ~I~tp~~~H~~~~~~al~~g-k~v~~  129 (221)
T d1h6da1         105 YIILPNSLHAEFAIRAFKAG-KHVMC  129 (221)
T ss_dssp             EECSCGGGHHHHHHHHHHTT-CEEEE
T ss_pred             eeccchhhhhhHHHHhhhcc-hhhhc
Confidence            99998877888888888754 54555

>d1p91a_ c.66.1.33 (A:) rRNA methyltransferase RlmA {Escherichia coli [TaxId: 562]}

class: Alpha and beta proteins (a/b)
fold: S-adenosyl-L-methionine-dependent methyltransferases
superfamily: S-adenosyl-L-methionine-dependent methyltransferases
family: rRNA methyltransferase RlmA
domain: rRNA methyltransferase RlmA
species: Escherichia coli [TaxId: 562]

Probab=90.96  E-value=0.54  Score=38.13  Aligned_cols=95  Identities=18%  Similarity=0.113  Sum_probs=62.3

Q ss_pred             CCCCCEEEEEcCCHHHHHHHHHHHHHCCCCeEEEEeCChhHHHHHHHcCCC-EEEeCCCCcccHHHHHHHHHHHhCCCce
Q 017868          179 IGPETNVLIMGAGPIGLVTMLGAPRAFGAPRIVIVDVDDYRLSVAKEIGAD-NIVKVSTNLQDIAEEVEKIQKAMGTGID  257 (365)
Q Consensus       179 ~~~g~~vlI~G~g~~G~~ai~~l~~~~g~~~vi~v~~~~~~~~~~~~~g~~-~~~~~~~~~~~~~~~i~~~~~~~~~~~d  257 (365)
                      ..++.+||=.|+|. |..+.. +++...-..++++|.+++..+.+++.... ..+..+...-.+          ....+|
T Consensus        82 ~~~~~~iLDiGcG~-G~~~~~-l~~~~~~~~~~giD~s~~~~~~a~~~~~~~~~~~~d~~~l~~----------~~~sfD  149 (268)
T d1p91a_          82 DDKATAVLDIGCGE-GYYTHA-FADALPEITTFGLDVSKVAIKAAAKRYPQVTFCVASSHRLPF----------SDTSMD  149 (268)
T ss_dssp             CTTCCEEEEETCTT-STTHHH-HHHTCTTSEEEEEESCHHHHHHHHHHCTTSEEEECCTTSCSB----------CTTCEE
T ss_pred             CCCCCEEEEeCCCC-cHHHHH-HHHHCCCCEEEEecchHhhhhhhhcccccccceeeehhhccC----------CCCCEE
Confidence            45778888888754 555555 55554333789999999988887664322 222212111111          146799


Q ss_pred             EEEeCCCCHHHHHHHHHhcccCCEEEEEc
Q 017868          258 VSFDCAGLNKTMSTALGATCAGGKVCLVG  286 (365)
Q Consensus       258 ~vid~~g~~~~~~~~~~~l~~~G~~~~~g  286 (365)
                      +|+.... +..+..+.++|+++|.++...
T Consensus       150 ~v~~~~~-~~~~~e~~rvLkpgG~l~~~~  177 (268)
T d1p91a_         150 AIIRIYA-PCKAEELARVVKPGGWVITAT  177 (268)
T ss_dssp             EEEEESC-CCCHHHHHHHEEEEEEEEEEE
T ss_pred             EEeecCC-HHHHHHHHHHhCCCcEEEEEe
Confidence            9997544 446788999999999998874

>d1i24a_ c.2.1.2 (A:) Sulfolipid biosynthesis protein SQD1 {Thale cress (Arabidopsis thaliana) [TaxId: 3702]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Tyrosine-dependent oxidoreductases
domain: Sulfolipid biosynthesis protein SQD1
species: Thale cress (Arabidopsis thaliana) [TaxId: 3702]

Probab=90.82  E-value=0.3  Score=42.05  Aligned_cols=31  Identities=29%  Similarity=0.446  Sum_probs=24.6

Q ss_pred             CCEEEEEcC-CHHHHHHHHHHHHHCCCCeEEEEe
Q 017868          182 ETNVLIMGA-GPIGLVTMLGAPRAFGAPRIVIVD  214 (365)
Q Consensus       182 g~~vlI~G~-g~~G~~ai~~l~~~~g~~~vi~v~  214 (365)
                      |.+|||+|+ |-+|..++..| ...|. .|+++|
T Consensus         1 g~kILVTGatGfiG~~lv~~L-l~~g~-~V~~iD   32 (393)
T d1i24a_           1 GSRVMVIGGDGYCGWATALHL-SKKNY-EVCIVD   32 (393)
T ss_dssp             -CEEEEETTTSHHHHHHHHHH-HHTTC-EEEEEE
T ss_pred             CCEEEEECCCcHHHHHHHHHH-HHCcC-EEEEEe
Confidence            679999987 99999999945 45698 578876

>d1f0ya2 c.2.1.6 (A:12-203) Short chain L-3-hydroxyacyl CoA dehydrogenase {Human (Homo sapiens) [TaxId: 9606]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: 6-phosphogluconate dehydrogenase-like, N-terminal domain
domain: Short chain L-3-hydroxyacyl CoA dehydrogenase
species: Human (Homo sapiens) [TaxId: 9606]

Probab=90.74  E-value=0.29  Score=37.66  Aligned_cols=38  Identities=26%  Similarity=0.392  Sum_probs=30.7

Q ss_pred             CEEEEEcCCHHHHHHHHHHHHHCCCCeEEEEeCChhHHHH
Q 017868          183 TNVLIMGAGPIGLVTMLGAPRAFGAPRIVIVDVDDYRLSV  222 (365)
Q Consensus       183 ~~vlI~G~g~~G~~ai~~l~~~~g~~~vi~v~~~~~~~~~  222 (365)
                      .+|.|.|+|.+|...++ ++...|+ .|+..+.+++..+.
T Consensus         5 kkvaViGaG~mG~~iA~-~~a~~G~-~V~l~D~~~~~l~~   42 (192)
T d1f0ya2           5 KHVTVIGGGLMGAGIAQ-VAAATGH-TVVLVDQTEDILAK   42 (192)
T ss_dssp             CEEEEECCSHHHHHHHH-HHHHTTC-EEEEECSCHHHHHH
T ss_pred             EEEEEECcCHHHHHHHH-HHHhCCC-cEEEEECChHHHHH
Confidence            48999999999999998 5556799 68888888875543

>d1mjfa_ c.66.1.17 (A:) Putative spermidine synthetase PF0127 (SpeE) {Archaeon Pyrococcus furiosus [TaxId: 2261]}

class: Alpha and beta proteins (a/b)
fold: S-adenosyl-L-methionine-dependent methyltransferases
superfamily: S-adenosyl-L-methionine-dependent methyltransferases
family: Spermidine synthase
domain: Putative spermidine synthetase PF0127 (SpeE)
species: Archaeon Pyrococcus furiosus [TaxId: 2261]

Probab=90.55  E-value=1.5  Score=35.51  Aligned_cols=96  Identities=17%  Similarity=0.204  Sum_probs=60.1

Q ss_pred             CCCCEEEEEcCCHHHHHHHHHHHHHCCCCeEEEEeCChhHHHHHHHcC-C-------------CEEEeCCCCcccHHHHH
Q 017868          180 GPETNVLIMGAGPIGLVTMLGAPRAFGAPRIVIVDVDDYRLSVAKEIG-A-------------DNIVKVSTNLQDIAEEV  245 (365)
Q Consensus       180 ~~g~~vlI~G~g~~G~~ai~~l~~~~g~~~vi~v~~~~~~~~~~~~~g-~-------------~~~~~~~~~~~~~~~~i  245 (365)
                      ....+|||.|+|. |..+-. +++. +...+.+++-+++-.+.++++- .             +.+....   .|....+
T Consensus        71 ~~p~~vLiiG~G~-G~~~~~-~l~~-~~~~v~~VEiD~~Vi~~a~~~f~~~~~~~~~~~~~~d~rv~i~~---~Da~~~l  144 (276)
T d1mjfa_          71 PKPKRVLVIGGGD-GGTVRE-VLQH-DVDEVIMVEIDEDVIMVSKDLIKIDNGLLEAMLNGKHEKAKLTI---GDGFEFI  144 (276)
T ss_dssp             SCCCEEEEEECTT-SHHHHH-HTTS-CCSEEEEEESCHHHHHHHHHHTCTTTTHHHHHHTTCCSSEEEEE---SCHHHHH
T ss_pred             CCCceEEEecCCc-hHHHHH-HHHh-CCceEEEecCCHHHHHHHHHhhhhccchhhhhhccCCCCceEEE---ChHHHHH
Confidence            4557999998754 334444 4444 5568899999999888887642 1             1111111   2333334


Q ss_pred             HHHHHHhCCCceEEEe-CCC---------CHHHHHHHHHhcccCCEEEEEc
Q 017868          246 EKIQKAMGTGIDVSFD-CAG---------LNKTMSTALGATCAGGKVCLVG  286 (365)
Q Consensus       246 ~~~~~~~~~~~d~vid-~~g---------~~~~~~~~~~~l~~~G~~~~~g  286 (365)
                      ++     .+++|+||- +..         +.+-+..+.++|+++|.++..+
T Consensus       145 ~~-----~~~yDvIi~D~~~~~~~~~~L~t~eF~~~~~~~L~~~Gv~v~q~  190 (276)
T d1mjfa_         145 KN-----NRGFDVIIADSTDPVGPAKVLFSEEFYRYVYDALNNPGIYVTQA  190 (276)
T ss_dssp             HH-----CCCEEEEEEECCCCC-----TTSHHHHHHHHHHEEEEEEEEEEE
T ss_pred             hc-----cCCCCEEEEeCCCCCCCcccccCHHHHHhhHhhcCCCceEEEec
Confidence            32     578999964 332         1245667889999999998764

>d1d7ya2 c.3.1.5 (A:116-236) NADH-dependent ferredoxin reductase, BphA4 {Pseudomonas sp., KKS102 [TaxId: 306]}

class: Alpha and beta proteins (a/b)
fold: FAD/NAD(P)-binding domain
superfamily: FAD/NAD(P)-binding domain
family: FAD/NAD-linked reductases, N-terminal and central domains
domain: NADH-dependent ferredoxin reductase, BphA4
species: Pseudomonas sp., KKS102 [TaxId: 306]

Probab=90.43  E-value=0.73  Score=32.21  Aligned_cols=67  Identities=24%  Similarity=0.494  Sum_probs=43.4

Q ss_pred             CCCCCEEEEEcCCHHHHHHHHHHHHHCCCCeEEEEeCChhHHHHHHHcCCCEEEeCCCCcccHHHHHHHHHHHhCCCceE
Q 017868          179 IGPETNVLIMGAGPIGLVTMLGAPRAFGAPRIVIVDVDDYRLSVAKEIGADNIVKVSTNLQDIAEEVEKIQKAMGTGIDV  258 (365)
Q Consensus       179 ~~~g~~vlI~G~g~~G~~ai~~l~~~~g~~~vi~v~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~i~~~~~~~~~~~d~  258 (365)
                      ++++++++|.|+|.+|.=++. .++..|. .|..+.+.+.-.      .       ...+++..+.+++..+  ..|+++
T Consensus        27 ~~~~~~vvIIGgG~iG~E~A~-~l~~~g~-~Vtli~~~~~~l------~-------~~~~~~~~~~~~~~l~--~~GV~i   89 (121)
T d1d7ya2          27 LRPQSRLLIVGGGVIGLELAA-TARTAGV-HVSLVETQPRLM------S-------RAAPATLADFVARYHA--AQGVDL   89 (121)
T ss_dssp             CCTTCEEEEECCSHHHHHHHH-HHHHTTC-EEEEEESSSSTT------T-------TTSCHHHHHHHHHHHH--TTTCEE
T ss_pred             hhcCCeEEEECcchhHHHHHH-Hhhcccc-eEEEEeeccccc------c-------ccCCHHHHHHHHHHHH--HCCcEE
Confidence            467799999999999998888 6667798 466665544311      0       0112445555555444  567887


Q ss_pred             EEeC
Q 017868          259 SFDC  262 (365)
Q Consensus       259 vid~  262 (365)
                      ..+.
T Consensus        90 ~~~~   93 (121)
T d1d7ya2          90 RFER   93 (121)
T ss_dssp             EESC
T ss_pred             EeCC
Confidence            7764

>d1ne2a_ c.66.1.32 (A:) Hypothetical protein Ta1320 {Archaeon Thermoplasma acidophilum [TaxId: 2303]}

class: Alpha and beta proteins (a/b)
fold: S-adenosyl-L-methionine-dependent methyltransferases
superfamily: S-adenosyl-L-methionine-dependent methyltransferases
family: Ta1320-like
domain: Hypothetical protein Ta1320
species: Archaeon Thermoplasma acidophilum [TaxId: 2303]

Probab=90.40  E-value=1.2  Score=34.18  Aligned_cols=71  Identities=21%  Similarity=0.287  Sum_probs=45.6

Q ss_pred             HhcCCCCCCEEEEEcCCHHHHHHHHHHHHHCCCCeEEEEeCChhHHHHHHHcCC-CEEEeCCCCcccHHHHHHHHHHHhC
Q 017868          175 RRANIGPETNVLIMGAGPIGLVTMLGAPRAFGAPRIVIVDVDDYRLSVAKEIGA-DNIVKVSTNLQDIAEEVEKIQKAMG  253 (365)
Q Consensus       175 ~~~~~~~g~~vlI~G~g~~G~~ai~~l~~~~g~~~vi~v~~~~~~~~~~~~~g~-~~~~~~~~~~~~~~~~i~~~~~~~~  253 (365)
                      ...++ .|++||=.|+|. |..++. + ...|++.|++++.+++..+.+++.-. ..++.  .   |+    .+    ..
T Consensus        43 ~~~dl-~Gk~VLDlGcGt-G~l~i~-a-~~~ga~~V~~vDid~~a~~~ar~N~~~~~~~~--~---D~----~~----l~  105 (197)
T d1ne2a_          43 NDGNI-GGRSVIDAGTGN-GILACG-S-YLLGAESVTAFDIDPDAIETAKRNCGGVNFMV--A---DV----SE----IS  105 (197)
T ss_dssp             HHTSS-BTSEEEEETCTT-CHHHHH-H-HHTTBSEEEEEESCHHHHHHHHHHCTTSEEEE--C---CG----GG----CC
T ss_pred             HcCCC-CCCEEEEeCCCC-cHHHHH-H-HHcCCCcccccccCHHHHHHHHHccccccEEE--E---eh----hh----cC
Confidence            44555 589999988753 444444 3 34588889999999998888877332 23333  1   21    11    15


Q ss_pred             CCceEEEeC
Q 017868          254 TGIDVSFDC  262 (365)
Q Consensus       254 ~~~d~vid~  262 (365)
                      +.+|+||..
T Consensus       106 ~~fD~Vi~N  114 (197)
T d1ne2a_         106 GKYDTWIMN  114 (197)
T ss_dssp             CCEEEEEEC
T ss_pred             CcceEEEeC
Confidence            789999864

>d1fjha_ c.2.1.2 (A:) 3-alpha-hydroxysteroid dehydrogenase {Comamonas testosteroni [TaxId: 285]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Tyrosine-dependent oxidoreductases
domain: 3-alpha-hydroxysteroid dehydrogenase
species: Comamonas testosteroni [TaxId: 285]

Probab=90.30  E-value=0.41  Score=38.33  Aligned_cols=33  Identities=33%  Similarity=0.362  Sum_probs=25.1

Q ss_pred             EEEEEcC-CHHHHHHHHHHHHHCCCCeEEEEeCChh
Q 017868          184 NVLIMGA-GPIGLVTMLGAPRAFGAPRIVIVDVDDY  218 (365)
Q Consensus       184 ~vlI~G~-g~~G~~ai~~l~~~~g~~~vi~v~~~~~  218 (365)
                      .|||+|+ +++|.++++.++ ..|+ +|+.++++++
T Consensus         3 VvlITGas~GIG~aiA~~la-~~Ga-~V~~~~~~~~   36 (257)
T d1fjha_           3 IIVISGCATGIGAATRKVLE-AAGH-QIVGIDIRDA   36 (257)
T ss_dssp             EEEEETTTSHHHHHHHHHHH-HTTC-EEEEEESSSS
T ss_pred             EEEEeCCCCHHHHHHHHHHH-HCCC-EEEEEECChH
Confidence            5688887 999999999554 6699 5777776543

>d2voua1 c.3.1.2 (A:2-163,A:292-394) Dihydroxypyridine hydroxylase DhpH {Arthrobacter nicotinovorans [TaxId: 29320]}

class: Alpha and beta proteins (a/b)
fold: FAD/NAD(P)-binding domain
superfamily: FAD/NAD(P)-binding domain
family: FAD-linked reductases, N-terminal domain
domain: Dihydroxypyridine hydroxylase DhpH
species: Arthrobacter nicotinovorans [TaxId: 29320]

Probab=90.22  E-value=0.17  Score=40.72  Aligned_cols=34  Identities=18%  Similarity=0.329  Sum_probs=27.7

Q ss_pred             CCCEEEEEcCCHHHHHHHHHHHHHCCCCeEEEEeCC
Q 017868          181 PETNVLIMGAGPIGLVTMLGAPRAFGAPRIVIVDVD  216 (365)
Q Consensus       181 ~g~~vlI~G~g~~G~~ai~~l~~~~g~~~vi~v~~~  216 (365)
                      ..++|+|.|+|..|++++. .+...|. .|++++++
T Consensus         3 ~~~kV~IiGaG~aGl~~A~-~L~~~G~-~v~v~Er~   36 (265)
T d2voua1           3 TTDRIAVVGGSISGLTAAL-MLRDAGV-DVDVYERS   36 (265)
T ss_dssp             CCSEEEEECCSHHHHHHHH-HHHHTTC-EEEEECSS
T ss_pred             CCCcEEEECcCHHHHHHHH-HHHHCCC-CEEEEeCC
Confidence            4578999999999999999 5556699 68888764

>d2p7ia1 c.66.1.41 (A:22-246) Hypothetical protein ECA1738 {Erwinia carotovora [TaxId: 554]}

class: Alpha and beta proteins (a/b)
fold: S-adenosyl-L-methionine-dependent methyltransferases
superfamily: S-adenosyl-L-methionine-dependent methyltransferases
family: UbiE/COQ5-like
domain: Hypothetical protein ECA1738
species: Erwinia carotovora [TaxId: 554]

Probab=90.22  E-value=0.34  Score=38.12  Aligned_cols=95  Identities=18%  Similarity=0.115  Sum_probs=58.8

Q ss_pred             CCCCCCEEEEEcCCHHHHHHHHHHHHHCCCCeEEEEeCChhHHHHHHHcCCCEEEeCCCCcccHHHHHHHHHHHhCCCce
Q 017868          178 NIGPETNVLIMGAGPIGLVTMLGAPRAFGAPRIVIVDVDDYRLSVAKEIGADNIVKVSTNLQDIAEEVEKIQKAMGTGID  257 (365)
Q Consensus       178 ~~~~g~~vlI~G~g~~G~~ai~~l~~~~g~~~vi~v~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~i~~~~~~~~~~~d  257 (365)
                      +..++.+||=.|+|. |..+.. +++. |. .|++++.+++..+.+++.....+-....+.+++         ...+.+|
T Consensus        17 ~~~~~~~VLDiGcG~-G~~~~~-l~~~-g~-~v~giD~s~~~i~~a~~~~~~~~~~~~~~~~~~---------~~~~~fD   83 (225)
T d2p7ia1          17 PFFRPGNLLELGSFK-GDFTSR-LQEH-FN-DITCVEASEEAISHAQGRLKDGITYIHSRFEDA---------QLPRRYD   83 (225)
T ss_dssp             GGCCSSCEEEESCTT-SHHHHH-HTTT-CS-CEEEEESCHHHHHHHHHHSCSCEEEEESCGGGC---------CCSSCEE
T ss_pred             hhCCCCcEEEEeCCC-cHHHHH-HHHc-CC-eEEEEeCcHHHhhhhhccccccccccccccccc---------ccccccc
Confidence            345677899998865 666666 6544 76 599999999999888765433221111221221         1146899


Q ss_pred             EEEeCC-----CCH-HHHHHHH-HhcccCCEEEEE
Q 017868          258 VSFDCA-----GLN-KTMSTAL-GATCAGGKVCLV  285 (365)
Q Consensus       258 ~vid~~-----g~~-~~~~~~~-~~l~~~G~~~~~  285 (365)
                      +|+..-     ..+ ..+.... ++|+++|.++..
T Consensus        84 ~I~~~~vleh~~d~~~~l~~i~~~~Lk~gG~l~i~  118 (225)
T d2p7ia1          84 NIVLTHVLEHIDDPVALLKRINDDWLAEGGRLFLV  118 (225)
T ss_dssp             EEEEESCGGGCSSHHHHHHHHHHTTEEEEEEEEEE
T ss_pred             cccccceeEecCCHHHHHHHHHHHhcCCCceEEEE
Confidence            997521     222 2344555 578999998864

>d1tlta1 c.2.1.3 (A:5-127,A:268-308) Virulence factor MviM {Escherichia coli [TaxId: 562]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Glyceraldehyde-3-phosphate dehydrogenase-like, N-terminal domain
domain: Virulence factor MviM
species: Escherichia coli [TaxId: 562]

Probab=90.17  E-value=0.45  Score=35.32  Aligned_cols=86  Identities=10%  Similarity=0.035  Sum_probs=54.9

Q ss_pred             EEEEEcCCHHHH-HHHHHHHHHCCCCeEEEEeCChhHH-HHHHHcCCCEEEeCCCCcccHHHHHHHHHHHhCCCceEEEe
Q 017868          184 NVLIMGAGPIGL-VTMLGAPRAFGAPRIVIVDVDDYRL-SVAKEIGADNIVKVSTNLQDIAEEVEKIQKAMGTGIDVSFD  261 (365)
Q Consensus       184 ~vlI~G~g~~G~-~ai~~l~~~~g~~~vi~v~~~~~~~-~~~~~~g~~~~~~~~~~~~~~~~~i~~~~~~~~~~~d~vid  261 (365)
                      +|.|.|+|.+|. ..+..+.+..+++.+.+.++++++. ++.++++...   +    .++.+    +.    ..+|+|+.
T Consensus         3 ri~iIG~G~~g~~~~~~~l~~~~~~~i~~v~d~~~~~~~~~~~~~~~~~---~----~~~~~----l~----~~~D~V~I   67 (164)
T d1tlta1           3 RIGVVGLGGIAQKAWLPVLAAASDWTLQGAWSPTRAKALPICESWRIPY---A----DSLSS----LA----ASCDAVFV   67 (164)
T ss_dssp             EEEEECCSTHHHHTHHHHHHSCSSEEEEEEECSSCTTHHHHHHHHTCCB---C----SSHHH----HH----TTCSEEEE
T ss_pred             EEEEEcCCHHHHHHHHHHHHhCCCcEEEEEEechhHhhhhhhhcccccc---c----ccchh----hh----hhcccccc
Confidence            578999999986 3555344445675555556666554 4567787652   1    12211    21    35899999


Q ss_pred             CCCCHHHHHHHHHhcccCCEEEEE
Q 017868          262 CAGLNKTMSTALGATCAGGKVCLV  285 (365)
Q Consensus       262 ~~g~~~~~~~~~~~l~~~G~~~~~  285 (365)
                      |+....+.+.+..++..+ .-+++
T Consensus        68 ~tp~~~h~~~~~~al~~g-k~V~~   90 (164)
T d1tlta1          68 HSSTASHFDVVSTLLNAG-VHVCV   90 (164)
T ss_dssp             CSCTTHHHHHHHHHHHTT-CEEEE
T ss_pred             cccchhcccccccccccc-ceeec
Confidence            988777888888888765 44444

>d1g6q1_ c.66.1.6 (1:) Arginine methyltransferase, HMT1 {Baker's yeast (Saccharomyces cerevisiae) [TaxId: 4932]}

class: Alpha and beta proteins (a/b)
fold: S-adenosyl-L-methionine-dependent methyltransferases
superfamily: S-adenosyl-L-methionine-dependent methyltransferases
family: Arginine methyltransferase
domain: Arginine methyltransferase, HMT1
species: Baker's yeast (Saccharomyces cerevisiae) [TaxId: 4932]

Probab=90.15  E-value=0.34  Score=40.72  Aligned_cols=95  Identities=19%  Similarity=0.289  Sum_probs=53.3

Q ss_pred             CCCCCCEEEEEcCCHHHHHHHHHHHHHCCCCeEEEEeCChhH---HHHHHHcCCCE-EEeCCCCcccHHHHHHHHHHHhC
Q 017868          178 NIGPETNVLIMGAGPIGLVTMLGAPRAFGAPRIVIVDVDDYR---LSVAKEIGADN-IVKVSTNLQDIAEEVEKIQKAMG  253 (365)
Q Consensus       178 ~~~~g~~vlI~G~g~~G~~ai~~l~~~~g~~~vi~v~~~~~~---~~~~~~~g~~~-~~~~~~~~~~~~~~i~~~~~~~~  253 (365)
                      .+.+|++||-.|+|. |..++. +++ .|+++|++++.++.-   .+..++.+... +..+..+..++        ....
T Consensus        35 ~~~~~~~VLDlGcGt-G~ls~~-aa~-~Ga~~V~avd~s~~~~~a~~~~~~~~~~~~i~~i~~~~~~l--------~~~~  103 (328)
T d1g6q1_          35 DLFKDKIVLDVGCGT-GILSMF-AAK-HGAKHVIGVDMSSIIEMAKELVELNGFSDKITLLRGKLEDV--------HLPF  103 (328)
T ss_dssp             HHHTTCEEEEETCTT-SHHHHH-HHH-TCCSEEEEEESSTHHHHHHHHHHHTTCTTTEEEEESCTTTS--------CCSS
T ss_pred             ccCCcCEEEEeCCCC-CHHHHH-HHH-hCCCEEEEEeCCHHHHHHHHHHHHhCccccceEEEeehhhc--------cCcc
Confidence            446789999998863 554444 444 588899999988632   22334445322 21111222221        0114


Q ss_pred             CCceEEEeCCC--------C-HHHHHHHHHhcccCCEEE
Q 017868          254 TGIDVSFDCAG--------L-NKTMSTALGATCAGGKVC  283 (365)
Q Consensus       254 ~~~d~vid~~g--------~-~~~~~~~~~~l~~~G~~~  283 (365)
                      ..+|+|+...-        . ...+...-+.|+++|.++
T Consensus       104 ~~~D~i~se~~~~~~~~e~~~~~~~~a~~r~LkpgG~ii  142 (328)
T d1g6q1_         104 PKVDIIISEWMGYFLLYESMMDTVLYARDHYLVEGGLIF  142 (328)
T ss_dssp             SCEEEEEECCCBTTBSTTCCHHHHHHHHHHHEEEEEEEE
T ss_pred             cceeEEEEEecceeeccchhHHHHHHHHHhccCCCeEEE
Confidence            67999876221        1 123334457899999875

>d1leha1 c.2.1.7 (A:135-364) Leucine dehydrogenase {Bacillus sphaericus [TaxId: 1421]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Aminoacid dehydrogenase-like, C-terminal domain
domain: Leucine dehydrogenase
species: Bacillus sphaericus [TaxId: 1421]

Probab=90.03  E-value=0.39  Score=37.99  Aligned_cols=48  Identities=29%  Similarity=0.338  Sum_probs=38.6

Q ss_pred             CCCCEEEEEcCCHHHHHHHHHHHHHCCCCeEEEEeCChhHHHHH-HHcCCC
Q 017868          180 GPETNVLIMGAGPIGLVTMLGAPRAFGAPRIVIVDVDDYRLSVA-KEIGAD  229 (365)
Q Consensus       180 ~~g~~vlI~G~g~~G~~ai~~l~~~~g~~~vi~v~~~~~~~~~~-~~~g~~  229 (365)
                      -.|.+|+|.|.|.+|..+++ ++...|+ ++++++.+..+.+.+ ...|..
T Consensus        37 l~g~~v~IqG~GnVG~~~a~-~L~~~Ga-kvv~~d~~~~~~~~~~~~~g~~   85 (230)
T d1leha1          37 LEGLAVSVQGLGNVAKALCK-KLNTEGA-KLVVTDVNKAAVSAAVAEEGAD   85 (230)
T ss_dssp             CTTCEEEEECCSHHHHHHHH-HHHHTTC-EEEEECSCHHHHHHHHHHHCCE
T ss_pred             CCCCEEEEECCCHHHHHHHH-HHHHCCC-EEEeecccHHHHHHHHHhcCCc
Confidence            47899999999999999999 7778899 678888887776544 456654

>d1nvta1 c.2.1.7 (A:111-287) Shikimate 5-dehydrogenase AroE {Archaeon Methanococcus jannaschii [TaxId: 2190]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Aminoacid dehydrogenase-like, C-terminal domain
domain: Shikimate 5-dehydrogenase AroE
species: Archaeon Methanococcus jannaschii [TaxId: 2190]

Probab=89.90  E-value=0.3  Score=36.96  Aligned_cols=40  Identities=18%  Similarity=0.198  Sum_probs=30.5

Q ss_pred             CCCCEEEEEcCCHHHHHHHHHHHHHCCCCeEEEEeCChhHHHH
Q 017868          180 GPETNVLIMGAGPIGLVTMLGAPRAFGAPRIVIVDVDDYRLSV  222 (365)
Q Consensus       180 ~~g~~vlI~G~g~~G~~ai~~l~~~~g~~~vi~v~~~~~~~~~  222 (365)
                      -++.+|||.|+|+++.+++. .+...  ..+..+.++.+|.+.
T Consensus        16 ~~~k~vlIlGaGG~arai~~-aL~~~--~~i~I~nR~~~ka~~   55 (177)
T d1nvta1          16 VKDKNIVIYGAGGAARAVAF-ELAKD--NNIIIANRTVEKAEA   55 (177)
T ss_dssp             CCSCEEEEECCSHHHHHHHH-HHTSS--SEEEEECSSHHHHHH
T ss_pred             cCCCEEEEECCcHHHHHHHH-HHccc--cceeeehhhhhHHHH
Confidence            47789999999999998887 44333  367788888777653

>d2gh1a1 c.66.1.49 (A:13-293) Methyltransferase BC2162 {Bacillus cereus [TaxId: 1396]}

class: Alpha and beta proteins (a/b)
fold: S-adenosyl-L-methionine-dependent methyltransferases
superfamily: S-adenosyl-L-methionine-dependent methyltransferases
family: BC2162-like
domain: Methyltransferase BC2162
species: Bacillus cereus [TaxId: 1396]

Probab=89.68  E-value=0.85  Score=37.13  Aligned_cols=98  Identities=15%  Similarity=0.203  Sum_probs=62.8

Q ss_pred             cCCCCCCEEEEEcCCHHHHHHHHHHHHHCCC-CeEEEEeCChhHHHHHHH----cCCCEEEeCCCCcccHHHHHHHHHHH
Q 017868          177 ANIGPETNVLIMGAGPIGLVTMLGAPRAFGA-PRIVIVDVDDYRLSVAKE----IGADNIVKVSTNLQDIAEEVEKIQKA  251 (365)
Q Consensus       177 ~~~~~g~~vlI~G~g~~G~~ai~~l~~~~g~-~~vi~v~~~~~~~~~~~~----~g~~~~~~~~~~~~~~~~~i~~~~~~  251 (365)
                      .++.++.+||=.|+|. |..+.. +++..+. ..++++|.+++..+.+++    .+....+.. .+..++         .
T Consensus        23 ~~~~~~~~ILDiGcG~-G~~~~~-la~~~~~~~~v~giD~s~~~l~~a~~~~~~~~~~~~f~~-~d~~~~---------~   90 (281)
T d2gh1a1          23 WKITKPVHIVDYGCGY-GYLGLV-LMPLLPEGSKYTGIDSGETLLAEARELFRLLPYDSEFLE-GDATEI---------E   90 (281)
T ss_dssp             SCCCSCCEEEEETCTT-THHHHH-HTTTSCTTCEEEEEECCHHHHHHHHHHHHSSSSEEEEEE-SCTTTC---------C
T ss_pred             hccCCcCEEEEecCcC-CHHHHH-HHHhCCCCCEEEEEecchhHhhhhhcccccccccccccc-cccccc---------c
Confidence            3567888999889864 777777 6665542 379999999987776654    333221111 111111         0


Q ss_pred             hCCCceEEEeCCC-----C-HHHHHHHHHhcccCCEEEEEc
Q 017868          252 MGTGIDVSFDCAG-----L-NKTMSTALGATCAGGKVCLVG  286 (365)
Q Consensus       252 ~~~~~d~vid~~g-----~-~~~~~~~~~~l~~~G~~~~~g  286 (365)
                      ....+|+|+....     . ...+..+.++|+++|.++...
T Consensus        91 ~~~~fD~v~~~~~l~~~~d~~~~l~~~~~~LkpgG~lii~~  131 (281)
T d2gh1a1          91 LNDKYDIAICHAFLLHMTTPETMLQKMIHSVKKGGKIICFE  131 (281)
T ss_dssp             CSSCEEEEEEESCGGGCSSHHHHHHHHHHTEEEEEEEEEEE
T ss_pred             ccCCceEEEEehhhhcCCCHHHHHHHHHHHcCcCcEEEEEE
Confidence            1457999987432     2 346778999999999988754

>d1uaya_ c.2.1.2 (A:) Type II 3-hydroxyacyl-CoA dehydrogenase {Thermus thermophilus [TaxId: 274]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Tyrosine-dependent oxidoreductases
domain: Type II 3-hydroxyacyl-CoA dehydrogenase
species: Thermus thermophilus [TaxId: 274]

Probab=89.68  E-value=0.18  Score=40.12  Aligned_cols=35  Identities=26%  Similarity=0.430  Sum_probs=27.3

Q ss_pred             CEEEEEcC-CHHHHHHHHHHHHHCCCCeEEEEeCChhH
Q 017868          183 TNVLIMGA-GPIGLVTMLGAPRAFGAPRIVIVDVDDYR  219 (365)
Q Consensus       183 ~~vlI~G~-g~~G~~ai~~l~~~~g~~~vi~v~~~~~~  219 (365)
                      +++||+|+ +++|.++++.++ ..|+ +|+.+++++++
T Consensus         2 K~alITGas~GIG~aiA~~la-~~Ga-~V~i~~~~~~~   37 (241)
T d1uaya_           2 RSALVTGGASGLGRAAALALK-ARGY-RVVVLDLRREG   37 (241)
T ss_dssp             CEEEEETTTSHHHHHHHHHHH-HHTC-EEEEEESSCCS
T ss_pred             CEEEEeCCCCHHHHHHHHHHH-HCCC-EEEEEECCccc
Confidence            57889987 999999999565 4599 57777776654

>d1mo9a2 c.3.1.5 (A:193-313) NADH-dependent 2-ketopropyl coenzyme M oxidoreductase/carboxylase {Xanthobacter sp., py2 [TaxId: 35809]}

class: Alpha and beta proteins (a/b)
fold: FAD/NAD(P)-binding domain
superfamily: FAD/NAD(P)-binding domain
family: FAD/NAD-linked reductases, N-terminal and central domains
domain: NADH-dependent 2-ketopropyl coenzyme M oxidoreductase/carboxylase
species: Xanthobacter sp., py2 [TaxId: 35809]

Probab=89.53  E-value=0.56  Score=32.64  Aligned_cols=42  Identities=17%  Similarity=0.230  Sum_probs=31.9

Q ss_pred             HHhcCCCCCCEEEEEcCCHHHHHHHHHHHHHCCCCeEEEEeCCh
Q 017868          174 CRRANIGPETNVLIMGAGPIGLVTMLGAPRAFGAPRIVIVDVDD  217 (365)
Q Consensus       174 ~~~~~~~~g~~vlI~G~g~~G~~ai~~l~~~~g~~~vi~v~~~~  217 (365)
                      ++.....++.+|+|.|+|.+|.=++. .++..|. .+..+.+.+
T Consensus        14 ~~~l~~~~~~~vvVvGgG~ig~E~A~-~l~~~g~-~vt~i~~~~   55 (121)
T d1mo9a2          14 VEELDYEPGSTVVVVGGSKTAVEYGC-FFNATGR-RTVMLVRTE   55 (121)
T ss_dssp             HHHCCSCCCSEEEEECCSHHHHHHHH-HHHHTTC-EEEEECSSC
T ss_pred             HHHHhhCCCCEEEEECCCHHHHHHHH-HHHhcch-hheEeeccc
Confidence            34556678899999999999998888 6677788 456665543

>d1qyda_ c.2.1.2 (A:) Pinoresinol-lariciresinol reductase {Giant arborvitae (Thuja plicata) [TaxId: 3316]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Tyrosine-dependent oxidoreductases
domain: Pinoresinol-lariciresinol reductase
species: Giant arborvitae (Thuja plicata) [TaxId: 3316]

Probab=89.44  E-value=0.5  Score=38.68  Aligned_cols=34  Identities=29%  Similarity=0.427  Sum_probs=25.1

Q ss_pred             CCCEEEEEcC-CHHHHHHHHHHHHHCCCCeEEEEeCC
Q 017868          181 PETNVLIMGA-GPIGLVTMLGAPRAFGAPRIVIVDVD  216 (365)
Q Consensus       181 ~g~~vlI~G~-g~~G~~ai~~l~~~~g~~~vi~v~~~  216 (365)
                      +-.+|||+|+ |-+|..++. .+...|.+ |+++.++
T Consensus         2 ~k~KILVtGatG~iG~~l~~-~L~~~G~~-V~~~~R~   36 (312)
T d1qyda_           2 KKSRVLIVGGTGYIGKRIVN-ASISLGHP-TYVLFRP   36 (312)
T ss_dssp             CCCCEEEESTTSTTHHHHHH-HHHHTTCC-EEEECCS
T ss_pred             CCCEEEEECCCCHHHHHHHH-HHHhCCCE-EEEEECC
Confidence            3467999997 999999999 44566985 5555554

>d1j6ua1 c.5.1.1 (A:0-88) UDP-N-acetylmuramate-alanine ligase MurC {Thermotoga maritima [TaxId: 2336]}

class: Alpha and beta proteins (a/b)
fold: MurCD N-terminal domain
superfamily: MurCD N-terminal domain
family: MurCD N-terminal domain
domain: UDP-N-acetylmuramate-alanine ligase MurC
species: Thermotoga maritima [TaxId: 2336]

Probab=89.29  E-value=1.8  Score=28.31  Aligned_cols=67  Identities=13%  Similarity=0.233  Sum_probs=45.5

Q ss_pred             CEEEEEcCCHHHHHHHHHHHHHCCCCeEEEEeCCh-hHHHHHHHcCCCEEEeCCCCcccHHHHHHHHHHHhCCCceEEEe
Q 017868          183 TNVLIMGAGPIGLVTMLGAPRAFGAPRIVIVDVDD-YRLSVAKEIGADNIVKVSTNLQDIAEEVEKIQKAMGTGIDVSFD  261 (365)
Q Consensus       183 ~~vlI~G~g~~G~~ai~~l~~~~g~~~vi~v~~~~-~~~~~~~~~g~~~~~~~~~~~~~~~~~i~~~~~~~~~~~d~vid  261 (365)
                      .+|-+.|-|++|+.++..+++..|+ .|.+.|..+ +..+.++++|+.....  .+.+++            .++|+|+-
T Consensus         2 ~~ihfiGIgG~GMs~LA~~L~~~G~-~VsGSD~~~~~~t~~L~~~Gi~i~~g--h~~~~i------------~~~d~vV~   66 (89)
T d1j6ua1           2 MKIHFVGIGGIGMSAVALHEFSNGN-DVYGSNIEETERTAYLRKLGIPIFVP--HSADNW------------YDPDLVIK   66 (89)
T ss_dssp             CEEEEETTTSHHHHHHHHHHHHTTC-EEEEECSSCCHHHHHHHHTTCCEESS--CCTTSC------------CCCSEEEE
T ss_pred             cEEEEEeECHHHHHHHHHHHHhCCC-eEEEEeCCCChhHHHHHHCCCeEEee--eccccc------------CCCCEEEE
Confidence            3566778888888665558889999 688888776 4566789999864332  222221            45788876


Q ss_pred             CCC
Q 017868          262 CAG  264 (365)
Q Consensus       262 ~~g  264 (365)
                      ..+
T Consensus        67 SsA   69 (89)
T d1j6ua1          67 TPA   69 (89)
T ss_dssp             CTT
T ss_pred             ecC
Confidence            554

>d2ex4a1 c.66.1.42 (A:2-224) Adrenal gland protein AD-003 (C9orf32) {Human (Homo sapiens) [TaxId: 9606]}

class: Alpha and beta proteins (a/b)
fold: S-adenosyl-L-methionine-dependent methyltransferases
superfamily: S-adenosyl-L-methionine-dependent methyltransferases
family: AD-003 protein-like
domain: Adrenal gland protein AD-003 (C9orf32)
species: Human (Homo sapiens) [TaxId: 9606]

Probab=89.21  E-value=0.42  Score=37.44  Aligned_cols=98  Identities=19%  Similarity=0.114  Sum_probs=61.7

Q ss_pred             CCCCCCEEEEEcCCHHHHHHHHHHHHHCCCCeEEEEeCChhHHHHHHHcC----CCEEEeCCCCcccHHHHHHHHHHHhC
Q 017868          178 NIGPETNVLIMGAGPIGLVTMLGAPRAFGAPRIVIVDVDDYRLSVAKEIG----ADNIVKVSTNLQDIAEEVEKIQKAMG  253 (365)
Q Consensus       178 ~~~~g~~vlI~G~g~~G~~ai~~l~~~~g~~~vi~v~~~~~~~~~~~~~g----~~~~~~~~~~~~~~~~~i~~~~~~~~  253 (365)
                      ...++.+||=.|+|. |..+.. +++.. ...|.+++.+++-.+.+++.-    ...+.-...+..++.        ...
T Consensus        57 ~~~~~~~vLDiGcG~-G~~~~~-l~~~~-~~~v~~vD~s~~~l~~ak~~~~~~~~~~~~f~~~d~~~~~--------~~~  125 (222)
T d2ex4a1          57 NKTGTSCALDCGAGI-GRITKR-LLLPL-FREVDMVDITEDFLVQAKTYLGEEGKRVRNYFCCGLQDFT--------PEP  125 (222)
T ss_dssp             -CCCCSEEEEETCTT-THHHHH-TTTTT-CSEEEEEESCHHHHHHHHHHTGGGGGGEEEEEECCGGGCC--------CCS
T ss_pred             CCCCCCEEEEeccCC-CHhhHH-HHHhc-CCEEEEeecCHHHhhccccccccccccccccccccccccc--------ccc
Confidence            456778899999865 777777 55453 447999999999888776642    222111111111210        114


Q ss_pred             CCceEEEeCC-----CCH---HHHHHHHHhcccCCEEEEEc
Q 017868          254 TGIDVSFDCA-----GLN---KTMSTALGATCAGGKVCLVG  286 (365)
Q Consensus       254 ~~~d~vid~~-----g~~---~~~~~~~~~l~~~G~~~~~g  286 (365)
                      ..+|+|+...     ..+   ..+..+.+.|+++|.+++..
T Consensus       126 ~~fD~I~~~~~l~h~~~~~~~~~l~~i~~~Lk~~G~~~i~~  166 (222)
T d2ex4a1         126 DSYDVIWIQWVIGHLTDQHLAEFLRRCKGSLRPNGIIVIKD  166 (222)
T ss_dssp             SCEEEEEEESCGGGSCHHHHHHHHHHHHHHEEEEEEEEEEE
T ss_pred             ccccccccccccccchhhhhhhHHHHHHHhcCCcceEEEEE
Confidence            6899998732     222   36677889999999998764

>d1id1a_ c.2.1.9 (A:) Rck domain from putative potassium channel Kch {Escherichia coli [TaxId: 562]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Potassium channel NAD-binding domain
domain: Rck domain from putative potassium channel Kch
species: Escherichia coli [TaxId: 562]

Probab=89.18  E-value=1.7  Score=31.47  Aligned_cols=95  Identities=12%  Similarity=0.132  Sum_probs=54.6

Q ss_pred             CCEEEEEcCCHHHHHHHHHHHHHCCCCeEEEEeCChhH-HHHHHH---cCCCEEEeCCCCcccHHHHHHHHHHHhCCCce
Q 017868          182 ETNVLIMGAGPIGLVTMLGAPRAFGAPRIVIVDVDDYR-LSVAKE---IGADNIVKVSTNLQDIAEEVEKIQKAMGTGID  257 (365)
Q Consensus       182 g~~vlI~G~g~~G~~ai~~l~~~~g~~~vi~v~~~~~~-~~~~~~---~g~~~~~~~~~~~~~~~~~i~~~~~~~~~~~d  257 (365)
                      .++++|.|.|.+|..+++ .+...|.+ +++++.++++ .+.+++   .|.. ++.-+..  + .+.+++.   .-..++
T Consensus         3 knHiII~G~g~~g~~l~~-~L~~~~~~-v~vId~d~~~~~~~~~~~~~~~~~-vi~Gd~~--d-~~~L~~a---~i~~a~   73 (153)
T d1id1a_           3 KDHFIVCGHSILAINTIL-QLNQRGQN-VTVISNLPEDDIKQLEQRLGDNAD-VIPGDSN--D-SSVLKKA---GIDRCR   73 (153)
T ss_dssp             CSCEEEECCSHHHHHHHH-HHHHTTCC-EEEEECCCHHHHHHHHHHHCTTCE-EEESCTT--S-HHHHHHH---TTTTCS
T ss_pred             CCEEEEECCCHHHHHHHH-HHHHcCCC-EEEEeccchhHHHHHHHhhcCCcE-EEEccCc--c-hHHHHHh---ccccCC
Confidence            468999999999999999 55677885 5666666543 233333   3443 3322222  2 2233332   346789


Q ss_pred             EEEeCCCCHHHHH---HHHHhcccCCEEEEE
Q 017868          258 VSFDCAGLNKTMS---TALGATCAGGKVCLV  285 (365)
Q Consensus       258 ~vid~~g~~~~~~---~~~~~l~~~G~~~~~  285 (365)
                      .++-+++....-.   ...+.+.+.-+++..
T Consensus        74 ~vi~~~~~d~~n~~~~~~~r~~~~~~~iia~  104 (153)
T d1id1a_          74 AILALSDNDADNAFVVLSAKDMSSDVKTVLA  104 (153)
T ss_dssp             EEEECSSCHHHHHHHHHHHHHHTSSSCEEEE
T ss_pred             EEEEccccHHHHHHHHHHHHHhCCCCceEEE
Confidence            9998887642211   233345555555544

>d1xvaa_ c.66.1.5 (A:) Glycine N-methyltransferase {Rat (Rattus norvegicus) [TaxId: 10116]}

class: Alpha and beta proteins (a/b)
fold: S-adenosyl-L-methionine-dependent methyltransferases
superfamily: S-adenosyl-L-methionine-dependent methyltransferases
family: Glycine N-methyltransferase
domain: Glycine N-methyltransferase
species: Rat (Rattus norvegicus) [TaxId: 10116]

Probab=89.02  E-value=0.13  Score=42.65  Aligned_cols=96  Identities=17%  Similarity=0.205  Sum_probs=59.2

Q ss_pred             CCCCCCEEEEEcCCHHHHHHHHHHHHHCCCCeEEEEeCChhHHHHHHHc----CCC------EEEeCCCCcccHHHHHHH
Q 017868          178 NIGPETNVLIMGAGPIGLVTMLGAPRAFGAPRIVIVDVDDYRLSVAKEI----GAD------NIVKVSTNLQDIAEEVEK  247 (365)
Q Consensus       178 ~~~~g~~vlI~G~g~~G~~ai~~l~~~~g~~~vi~v~~~~~~~~~~~~~----g~~------~~~~~~~~~~~~~~~i~~  247 (365)
                      +.+++.+||=.|+|. |..++. +++. |+ .|++++.+++-.+.+++.    +..      ....     -++...-..
T Consensus        53 ~~~~~~~vLD~GcG~-G~~~~~-la~~-g~-~v~gvD~S~~ml~~A~~~~~~~~~~~~~~~~~~~~-----~~~~~~~~~  123 (292)
T d1xvaa_          53 RQHGCHRVLDVACGT-GVDSIM-LVEE-GF-SVTSVDASDKMLKYALKERWNRRKEPAFDKWVIEE-----ANWLTLDKD  123 (292)
T ss_dssp             HHTTCCEEEESSCTT-SHHHHH-HHHT-TC-EEEEEESCHHHHHHHHHHHHHTTTSHHHHTCEEEE-----CCGGGHHHH
T ss_pred             hhcCCCEEEEecCCC-cHHHHH-HHHc-CC-eeeeccCchHHHHHHHHHHHhcccccccceeeeee-----ccccccccc
Confidence            345678998888865 777777 7655 88 699999999877665442    211      0111     111110011


Q ss_pred             HHHHhCCCceEEEeCCCC--------------HHHHHHHHHhcccCCEEEE
Q 017868          248 IQKAMGTGIDVSFDCAGL--------------NKTMSTALGATCAGGKVCL  284 (365)
Q Consensus       248 ~~~~~~~~~d~vid~~g~--------------~~~~~~~~~~l~~~G~~~~  284 (365)
                      .  .....+|.|+.....              ...+..+.++|+|+|.+++
T Consensus       124 ~--~~~~~fd~v~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~LkpgG~li~  172 (292)
T d1xvaa_         124 V--PAGDGFDAVICLGNSFAHLPDSKGDQSEHRLALKNIASMVRPGGLLVI  172 (292)
T ss_dssp             S--CCTTCEEEEEECSSCGGGSCCTTSSSHHHHHHHHHHHHTEEEEEEEEE
T ss_pred             c--CCCCCceEEEEecCchhhcCCcccChHHHHHHHHHHHHHcCcCcEEEE
Confidence            1  124679999863221              1267788999999999876

>d1gdha1 c.2.1.4 (A:101-291) D-glycerate dehydrogenase {Hyphomicrobium methylovorum [TaxId: 84]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Formate/glycerate dehydrogenases, NAD-domain
domain: D-glycerate dehydrogenase
species: Hyphomicrobium methylovorum [TaxId: 84]

Probab=88.98  E-value=0.45  Score=36.45  Aligned_cols=90  Identities=16%  Similarity=0.067  Sum_probs=54.7

Q ss_pred             CCCEEEEEcCCHHHHHHHHHHHHHCCCCeEEEEeCChhHHHHHHHcCCCEEEeCCCCcccHHHHHHHHHHHhCCCceEEE
Q 017868          181 PETNVLIMGAGPIGLVTMLGAPRAFGAPRIVIVDVDDYRLSVAKEIGADNIVKVSTNLQDIAEEVEKIQKAMGTGIDVSF  260 (365)
Q Consensus       181 ~g~~vlI~G~g~~G~~ai~~l~~~~g~~~vi~v~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~i~~~~~~~~~~~d~vi  260 (365)
                      .|.++.|+|.|.+|+..++ +++.+|. .++..+............+...   +    .++.+.+        ...|+|.
T Consensus        46 ~g~tvgIiG~G~IG~~va~-~l~~fg~-~v~~~d~~~~~~~~~~~~~~~~---~----~~l~~ll--------~~sD~v~  108 (191)
T d1gdha1          46 DNKTLGIYGFGSIGQALAK-RAQGFDM-DIDYFDTHRASSSDEASYQATF---H----DSLDSLL--------SVSQFFS  108 (191)
T ss_dssp             TTCEEEEECCSHHHHHHHH-HHHTTTC-EEEEECSSCCCHHHHHHHTCEE---C----SSHHHHH--------HHCSEEE
T ss_pred             cccceEEeecccchHHHHH-HHHhhcc-ccccccccccccchhhcccccc---c----CCHHHHH--------hhCCeEE
Confidence            4799999999999999999 8889999 5777776544333323323221   1    2332222        2357776


Q ss_pred             eCCCC-HHH---H-HHHHHhcccCCEEEEEcc
Q 017868          261 DCAGL-NKT---M-STALGATCAGGKVCLVGM  287 (365)
Q Consensus       261 d~~g~-~~~---~-~~~~~~l~~~G~~~~~g~  287 (365)
                      -+... +++   + ...++.|+++..++..+.
T Consensus       109 l~~plt~~T~~li~~~~l~~mk~~a~lIN~sR  140 (191)
T d1gdha1         109 LNAPSTPETRYFFNKATIKSLPQGAIVVNTAR  140 (191)
T ss_dssp             ECCCCCTTTTTCBSHHHHTTSCTTEEEEECSC
T ss_pred             ecCCCCchHhheecHHHhhCcCCccEEEecCC
Confidence            64432 111   1 256677777777776643

>d1ps9a3 c.4.1.1 (A:331-465,A:628-671) 2,4-dienoyl-CoA reductase, middle domain {Escherichia coli [TaxId: 562]}

class: Alpha and beta proteins (a/b)
fold: Nucleotide-binding domain
superfamily: Nucleotide-binding domain
family: N-terminal domain of adrenodoxin reductase-like
domain: 2,4-dienoyl-CoA reductase, middle domain
species: Escherichia coli [TaxId: 562]

Probab=88.86  E-value=0.31  Score=36.98  Aligned_cols=37  Identities=27%  Similarity=0.512  Sum_probs=29.9

Q ss_pred             CCCCCEEEEEcCCHHHHHHHHHHHHHCCCCeEEEEeCCh
Q 017868          179 IGPETNVLIMGAGPIGLVTMLGAPRAFGAPRIVIVDVDD  217 (365)
Q Consensus       179 ~~~g~~vlI~G~g~~G~~ai~~l~~~~g~~~vi~v~~~~  217 (365)
                      ...+.+|+|.|+|+.|+.++. .+...|. .|...+..+
T Consensus        40 ~~~~k~V~IIGaGPAGL~AA~-~la~~G~-~Vtl~E~~~   76 (179)
T d1ps9a3          40 AVQKKNLAVVGAGPAGLAFAI-NAAARGH-QVTLFDAHS   76 (179)
T ss_dssp             CSSCCEEEEECCSHHHHHHHH-HHHTTTC-EEEEEESSS
T ss_pred             CCCCcEEEEECccHHHHHHHH-HHHhhcc-ceEEEeccC
Confidence            456689999999999999999 6677798 577776654

>d2c5aa1 c.2.1.2 (A:13-375) GDP-mannose-3', 5'-epimerase {Thale cress (Arabidopsis thaliana) [TaxId: 3702]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Tyrosine-dependent oxidoreductases
domain: GDP-mannose-3', 5'-epimerase
species: Thale cress (Arabidopsis thaliana) [TaxId: 3702]

Probab=88.78  E-value=0.43  Score=40.43  Aligned_cols=75  Identities=19%  Similarity=0.221  Sum_probs=43.0

Q ss_pred             CCCCEEEEEcC-CHHHHHHHHHHHHHCCCCeEEEEeCChhHHHHHHHcCCCEEEeCCCCcccHHHHHHHHHHHhCCCceE
Q 017868          180 GPETNVLIMGA-GPIGLVTMLGAPRAFGAPRIVIVDVDDYRLSVAKEIGADNIVKVSTNLQDIAEEVEKIQKAMGTGIDV  258 (365)
Q Consensus       180 ~~g~~vlI~G~-g~~G~~ai~~l~~~~g~~~vi~v~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~i~~~~~~~~~~~d~  258 (365)
                      ..+.+|||+|+ |-+|..++. .+...|. .|+++++....... ...........+  ..+.....+..     .++|.
T Consensus        13 ~~nMKILVTGgsGfIGs~lv~-~L~~~g~-~V~~~d~~~~~~~~-~~~~~~~~~~~D--~~~~~~~~~~~-----~~~d~   82 (363)
T d2c5aa1          13 SENLKISITGAGGFIASHIAR-RLKHEGH-YVIASDWKKNEHMT-EDMFCDEFHLVD--LRVMENCLKVT-----EGVDH   82 (363)
T ss_dssp             TSCCEEEEETTTSHHHHHHHH-HHHHTTC-EEEEEESSCCSSSC-GGGTCSEEEECC--TTSHHHHHHHH-----TTCSE
T ss_pred             CCCCEEEEECCCCHHHHHHHH-HHHHCcC-EEEEEeCCCccchh-hhcccCcEEEee--chhHHHHHHHh-----hcCCe
Confidence            35789999987 999999999 4456688 56666544322111 112222333222  23333332222     57899


Q ss_pred             EEeCCC
Q 017868          259 SFDCAG  264 (365)
Q Consensus       259 vid~~g  264 (365)
                      |+.+++
T Consensus        83 Vih~a~   88 (363)
T d2c5aa1          83 VFNLAA   88 (363)
T ss_dssp             EEECCC
T ss_pred             Eeeccc
Confidence            998764

>d3lada2 c.3.1.5 (A:159-277) Dihydrolipoamide dehydrogenase {Azotobacter vinelandii [TaxId: 354]}

class: Alpha and beta proteins (a/b)
fold: FAD/NAD(P)-binding domain
superfamily: FAD/NAD(P)-binding domain
family: FAD/NAD-linked reductases, N-terminal and central domains
domain: Dihydrolipoamide dehydrogenase
species: Azotobacter vinelandii [TaxId: 354]

Probab=88.73  E-value=0.96  Score=31.42  Aligned_cols=33  Identities=24%  Similarity=0.357  Sum_probs=25.9

Q ss_pred             CCCEEEEEcCCHHHHHHHHHHHHHCCCCeEEEEeC
Q 017868          181 PETNVLIMGAGPIGLVTMLGAPRAFGAPRIVIVDV  215 (365)
Q Consensus       181 ~g~~vlI~G~g~~G~~ai~~l~~~~g~~~vi~v~~  215 (365)
                      ..++++|.|+|.+|+=+++ ..+.+|.+ |..+..
T Consensus        21 ~p~~i~IiG~G~ig~E~A~-~l~~~G~~-Vtiv~~   53 (119)
T d3lada2          21 VPGKLGVIGAGVIGLELGS-VWARLGAE-VTVLEA   53 (119)
T ss_dssp             CCSEEEEECCSHHHHHHHH-HHHHTTCE-EEEEES
T ss_pred             CCCeEEEECCChHHHHHHH-HHHHcCCc-eEEEEe
Confidence            4488999999999999999 66788995 444444

>d1seza1 c.3.1.2 (A:13-329,A:442-497) Protoporphyrinogen oxidase {Tobacco (Nicotiana tabacum) [TaxId: 4097]}

class: Alpha and beta proteins (a/b)
fold: FAD/NAD(P)-binding domain
superfamily: FAD/NAD(P)-binding domain
family: FAD-linked reductases, N-terminal domain
domain: Protoporphyrinogen oxidase
species: Tobacco (Nicotiana tabacum) [TaxId: 4097]

Probab=88.53  E-value=0.24  Score=40.57  Aligned_cols=33  Identities=21%  Similarity=0.480  Sum_probs=26.9

Q ss_pred             CCEEEEEcCCHHHHHHHHHHHHHCCCCeEEEEeCC
Q 017868          182 ETNVLIMGAGPIGLVTMLGAPRAFGAPRIVIVDVD  216 (365)
Q Consensus       182 g~~vlI~G~g~~G~~ai~~l~~~~g~~~vi~v~~~  216 (365)
                      +++|+|+|+|..|+.++. .++..|. .|.+++.+
T Consensus         1 ~KkV~IIGaG~aGL~aA~-~La~~G~-~V~vlE~~   33 (373)
T d1seza1           1 AKRVAVIGAGVSGLAAAY-KLKIHGL-NVTVFEAE   33 (373)
T ss_dssp             CCEEEEECCSHHHHHHHH-HHHTTSC-EEEEECSS
T ss_pred             CCEEEEECcCHHHHHHHH-HHHhCCC-CEEEEeCC
Confidence            578999999999999988 5556798 68888754

>d1nhpa2 c.3.1.5 (A:120-242) NADH peroxidase {Enterococcus faecalis [TaxId: 1351]}

class: Alpha and beta proteins (a/b)
fold: FAD/NAD(P)-binding domain
superfamily: FAD/NAD(P)-binding domain
family: FAD/NAD-linked reductases, N-terminal and central domains
domain: NADH peroxidase
species: Enterococcus faecalis [TaxId: 1351]

Probab=88.27  E-value=1  Score=31.52  Aligned_cols=69  Identities=17%  Similarity=0.255  Sum_probs=43.5

Q ss_pred             cCCCCCCEEEEEcCCHHHHHHHHHHHHHCCCCeEEEEeCChhHHHHHHHcCCCEEEeCCCCcccHHHHHHHHHHHhCCCc
Q 017868          177 ANIGPETNVLIMGAGPIGLVTMLGAPRAFGAPRIVIVDVDDYRLSVAKEIGADNIVKVSTNLQDIAEEVEKIQKAMGTGI  256 (365)
Q Consensus       177 ~~~~~g~~vlI~G~g~~G~~ai~~l~~~~g~~~vi~v~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~i~~~~~~~~~~~  256 (365)
                      ..-.++.+|+|.|+|.+|+-+++ .+..+|.+ |..+.+.+.-      ++       ..-+++....+++..+  ..++
T Consensus        25 ~~~~~~k~vvViGgG~iG~E~A~-~l~~~g~~-Vtlie~~~~~------l~-------~~~d~~~~~~~~~~l~--~~gv   87 (123)
T d1nhpa2          25 TVDPEVNNVVVIGSGYIGIEAAE-AFAKAGKK-VTVIDILDRP------LG-------VYLDKEFTDVLTEEME--ANNI   87 (123)
T ss_dssp             HTCTTCCEEEEECCSHHHHHHHH-HHHHTTCE-EEEEESSSST------TT-------TTCCHHHHHHHHHHHH--TTTE
T ss_pred             hhccCCCEEEEECChHHHHHHHH-HhhccceE-EEEEEecCcc------cc-------cccchhhHHHHHHHhh--cCCe
Confidence            33356789999999999998888 66777984 6666554321      11       0112445555555444  5677


Q ss_pred             eEEEeC
Q 017868          257 DVSFDC  262 (365)
Q Consensus       257 d~vid~  262 (365)
                      ++..++
T Consensus        88 ~~~~~~   93 (123)
T d1nhpa2          88 TIATGE   93 (123)
T ss_dssp             EEEESC
T ss_pred             EEEeCc
Confidence            777764

>d1llda1 c.2.1.5 (A:7-149) Lactate dehydrogenase {Bifidobacterium longum, strain am101-2 [TaxId: 216816]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: LDH N-terminal domain-like
domain: Lactate dehydrogenase
species: Bifidobacterium longum, strain am101-2 [TaxId: 216816]

Probab=88.21  E-value=3.2  Score=29.75  Aligned_cols=39  Identities=28%  Similarity=0.425  Sum_probs=28.5

Q ss_pred             CEEEEEcCCHHHHHHHHHHHHHCCCCeEEEEeCChhHHH
Q 017868          183 TNVLIMGAGPIGLVTMLGAPRAFGAPRIVIVDVDDYRLS  221 (365)
Q Consensus       183 ~~vlI~G~g~~G~~ai~~l~~~~g~~~vi~v~~~~~~~~  221 (365)
                      .+|.|.|+|.+|..++..++..-=+..++.++.++++.+
T Consensus         2 ~Ki~IIGaG~VG~~~a~~l~~~~l~~ElvL~D~~~~~~~   40 (143)
T d1llda1           2 TKLAVIGAGAVGSTLAFAAAQRGIAREIVLEDIAKERVE   40 (143)
T ss_dssp             CEEEEECCSHHHHHHHHHHHHTTCCSEEEEECSSHHHHH
T ss_pred             CEEEEECCCHHHHHHHHHHHhcCCCcEEEEEEeccccch
Confidence            468889999999988874443333457889998886643

>d1f06a1 c.2.1.3 (A:1-118,A:269-320) Diaminopimelic acid dehydrogenase (DAPDH) {Corynebacterium glutamicum [TaxId: 1718]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Glyceraldehyde-3-phosphate dehydrogenase-like, N-terminal domain
domain: Diaminopimelic acid dehydrogenase (DAPDH)
species: Corynebacterium glutamicum [TaxId: 1718]

Probab=88.10  E-value=0.63  Score=34.74  Aligned_cols=83  Identities=16%  Similarity=0.123  Sum_probs=53.5

Q ss_pred             EEEEEcCCHHHHHHHHHHHHHCCCCeEEEEeCChhHHHHHHHcCCCEEEeCCCCcccHHHHHHHHHHHhCCCceEEEeCC
Q 017868          184 NVLIMGAGPIGLVTMLGAPRAFGAPRIVIVDVDDYRLSVAKEIGADNIVKVSTNLQDIAEEVEKIQKAMGTGIDVSFDCA  263 (365)
Q Consensus       184 ~vlI~G~g~~G~~ai~~l~~~~g~~~vi~v~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~i~~~~~~~~~~~d~vid~~  263 (365)
                      +|.|+|+|.+|...+..+.+.-+++.+.++++++++.      .......+    .++..        ....+|+|+.|+
T Consensus         5 rvgiiG~G~ig~~~~~~l~~~~~~elvav~~~~~~~~------~~~~~~~~----~~~~~--------~~~~~D~Vvi~t   66 (170)
T d1f06a1           5 RVAIVGYGNLGRSVEKLIAKQPDMDLVGIFSRRATLD------TKTPVFDV----ADVDK--------HADDVDVLFLCM   66 (170)
T ss_dssp             EEEEECCSHHHHHHHHHHTTCSSEEEEEEEESSSCCS------SSSCEEEG----GGGGG--------TTTTCSEEEECS
T ss_pred             eEEEECChHHHHHHHHHHHhCCCcEEEEEEecccccc------cccccccc----hhhhh--------hccccceEEEeC
Confidence            6889999999998888454445675555555554331      11112211    11111        135789999999


Q ss_pred             CCHHHHHHHHHhcccCCEEEE
Q 017868          264 GLNKTMSTALGATCAGGKVCL  284 (365)
Q Consensus       264 g~~~~~~~~~~~l~~~G~~~~  284 (365)
                      ....+.+.+..+|..|-+++.
T Consensus        67 p~~~h~~~a~~aL~aG~~vv~   87 (170)
T d1f06a1          67 GSATDIPEQAPKFAQFACTVD   87 (170)
T ss_dssp             CTTTHHHHHHHHHTTTSEEEC
T ss_pred             CCcccHHHHHHHHHCCCcEEE
Confidence            887788889999998777664

>d1wkva1 c.79.1.1 (A:2-383) O-acetylserine sulfhydrylase (Cysteine synthase) {Archaeon Aeropyrum pernix [TaxId: 56636]}

class: Alpha and beta proteins (a/b)
fold: Tryptophan synthase beta subunit-like PLP-dependent enzymes
superfamily: Tryptophan synthase beta subunit-like PLP-dependent enzymes
family: Tryptophan synthase beta subunit-like PLP-dependent enzymes
domain: O-acetylserine sulfhydrylase (Cysteine synthase)
species: Archaeon Aeropyrum pernix [TaxId: 56636]

Probab=88.01  E-value=4.5  Score=34.28  Aligned_cols=56  Identities=16%  Similarity=0.246  Sum_probs=42.0

Q ss_pred             cCCCCCCEEEEEcCCHHHHHHHHHHHHHCCCCeEEEEe--CChhHHHHHHHcCCCEEEe
Q 017868          177 ANIGPETNVLIMGAGPIGLVTMLGAPRAFGAPRIVIVD--VDDYRLSVAKEIGADNIVK  233 (365)
Q Consensus       177 ~~~~~g~~vlI~G~g~~G~~ai~~l~~~~g~~~vi~v~--~~~~~~~~~~~~g~~~~~~  233 (365)
                      .+++++.+|+-..+|..|.+++. +++.+|.+.++++.  .++.|.+.++.+|+.-+..
T Consensus       139 ~~~~~g~~VVeaSSGN~GiAlA~-~aa~lGik~~Iv~P~~~~~~K~~~ira~GAeVi~~  196 (382)
T d1wkva1         139 RRVEKGSLVADATSSNFGVALSA-VARLYGYRARVYLPGAAEEFGKLLPRLLGAQVIVD  196 (382)
T ss_dssp             TTSCTTCEEEEECCHHHHHHHHH-HHHHTTCEEEEEEETTSCHHHHHHHHHTTCEEEEE
T ss_pred             hccCCCCEEEEeCCcHHHHHHHH-HHHHcCCCEEEEeeccccccccccccccCcceeec
Confidence            35677776544556889998888 99999998777664  3457888899999876543

>d1sqga2 c.66.1.38 (A:145-428) Ribosomal RNA small subunit methyltransferase B, RsmB (Sun, Fmu/Fmv), C-terminal domain {Escherichia coli [TaxId: 562]}

class: Alpha and beta proteins (a/b)
fold: S-adenosyl-L-methionine-dependent methyltransferases
superfamily: S-adenosyl-L-methionine-dependent methyltransferases
family: NOL1/NOP2/sun
domain: Ribosomal RNA small subunit methyltransferase B, RsmB (Sun, Fmu/Fmv), C-terminal domain
species: Escherichia coli [TaxId: 562]

Probab=87.96  E-value=2.2  Score=34.69  Aligned_cols=99  Identities=18%  Similarity=0.195  Sum_probs=59.4

Q ss_pred             hcCCCCCCEEEEEc-C-CHHHHHHHHHHHHHCCCCeEEEEeCChhHHH----HHHHcCCCEEEeCCCCcccHHHHHHHHH
Q 017868          176 RANIGPETNVLIMG-A-GPIGLVTMLGAPRAFGAPRIVIVDVDDYRLS----VAKEIGADNIVKVSTNLQDIAEEVEKIQ  249 (365)
Q Consensus       176 ~~~~~~g~~vlI~G-~-g~~G~~ai~~l~~~~g~~~vi~v~~~~~~~~----~~~~~g~~~~~~~~~~~~~~~~~i~~~~  249 (365)
                      ....++|++||=.- | |+--.++++    .+.-..+++++.++.|..    .++.+|+..+...... ......     
T Consensus        97 ~L~~~~g~~vLD~CAaPGgKt~~la~----l~~~~~i~a~d~~~~R~~~l~~~~~r~g~~~~~~~~~~-~~~~~~-----  166 (284)
T d1sqga2          97 WLAPQNGEHILDLCAAPGGKTTHILE----VAPEAQVVAVDIDEQRLSRVYDNLKRLGMKATVKQGDG-RYPSQW-----  166 (284)
T ss_dssp             HHCCCTTCEEEEESCTTCHHHHHHHH----HCTTCEEEEEESSTTTHHHHHHHHHHTTCCCEEEECCT-TCTHHH-----
T ss_pred             ccCccccceeEeccCccccchhhhhh----hhhhhhhhhhhcchhhhhhHhhhhhcccccceeeeccc-cccchh-----
Confidence            34678999998873 3 543333333    333347899999998864    4567887654433222 222111     


Q ss_pred             HHhCCCceEEEe---CCCCH-------------------------HHHHHHHHhcccCCEEEEE
Q 017868          250 KAMGTGIDVSFD---CAGLN-------------------------KTMSTALGATCAGGKVCLV  285 (365)
Q Consensus       250 ~~~~~~~d~vid---~~g~~-------------------------~~~~~~~~~l~~~G~~~~~  285 (365)
                       .....+|.|+-   |+|..                         ..+..++..|+++|+++..
T Consensus       167 -~~~~~fd~IL~DaPCSg~G~~rr~p~~~~~~~~~~~~~l~~lQ~~iL~~a~~~lk~gG~lvYs  229 (284)
T d1sqga2         167 -CGEQQFDRILLDAPCSATGVIRRHPDIKWLRRDRDIPELAQLQSEILDAIWPHLKTGGTLVYA  229 (284)
T ss_dssp             -HTTCCEEEEEEECCCCCGGGTTTCTTHHHHCCTTHHHHHHHHHHHHHHHHGGGEEEEEEEEEE
T ss_pred             -cccccccEEEEeccccccCccccccchhhccccchhhHHHHHHHHHHHHHHHhcCCCceEEEe
Confidence             12467998854   76632                         2445677788888887754

>d3c96a1 c.3.1.2 (A:4-182,A:294-402) Monooxygenase PhzS {Pseudomonas aeruginosa [TaxId: 287]}

class: Alpha and beta proteins (a/b)
fold: FAD/NAD(P)-binding domain
superfamily: FAD/NAD(P)-binding domain
family: FAD-linked reductases, N-terminal domain
domain: Monooxygenase PhzS
species: Pseudomonas aeruginosa [TaxId: 287]

Probab=87.95  E-value=0.28  Score=39.63  Aligned_cols=33  Identities=30%  Similarity=0.496  Sum_probs=26.5

Q ss_pred             EEEEEcCCHHHHHHHHHHHHHCCCCeEEEEeCCh
Q 017868          184 NVLIMGAGPIGLVTMLGAPRAFGAPRIVIVDVDD  217 (365)
Q Consensus       184 ~vlI~G~g~~G~~ai~~l~~~~g~~~vi~v~~~~  217 (365)
                      .|+|.|+|..|++++. +++..|...|.++++++
T Consensus         3 ~V~IvGaG~aGl~~A~-~L~~~Gi~~V~V~Er~~   35 (288)
T d3c96a1           3 DILIAGAGIGGLSCAL-ALHQAGIGKVTLLESSS   35 (288)
T ss_dssp             EEEEECCSHHHHHHHH-HHHHTTCSEEEEEESSS
T ss_pred             EEEEECcCHHHHHHHH-HHHhCCCCeEEEEeCCC
Confidence            6899999999999999 66667976677776654

>d1z7wa1 c.79.1.1 (A:3-322) O-acetylserine sulfhydrylase (Cysteine synthase) {Thale cress (Arabidopsis thaliana) [TaxId: 3702]}

class: Alpha and beta proteins (a/b)
fold: Tryptophan synthase beta subunit-like PLP-dependent enzymes
superfamily: Tryptophan synthase beta subunit-like PLP-dependent enzymes
family: Tryptophan synthase beta subunit-like PLP-dependent enzymes
domain: O-acetylserine sulfhydrylase (Cysteine synthase)
species: Thale cress (Arabidopsis thaliana) [TaxId: 3702]

Probab=87.89  E-value=4.6  Score=33.16  Aligned_cols=111  Identities=22%  Similarity=0.215  Sum_probs=68.7

Q ss_pred             HhcCCCCCCEEEEE-cCCHHHHHHHHHHHHHCCCCeEEEEe--CChhHHHHHHHcCCCEEEeCCC---------------
Q 017868          175 RRANIGPETNVLIM-GAGPIGLVTMLGAPRAFGAPRIVIVD--VDDYRLSVAKEIGADNIVKVST---------------  236 (365)
Q Consensus       175 ~~~~~~~g~~vlI~-G~g~~G~~ai~~l~~~~g~~~vi~v~--~~~~~~~~~~~~g~~~~~~~~~---------------  236 (365)
                      +...++.+...+|. .+|..|++++. .++.+|.+.++++.  .+..|.+.++.+|+.-+..-..               
T Consensus        57 ~~g~~~~~~~~vv~aSsGN~g~a~A~-~a~~~g~~~~iv~p~~~~~~k~~~i~~~Ga~vi~~~~~~~~~~~~~~~~~~~~  135 (320)
T d1z7wa1          57 KKGLIKPGESVLIEPTSGNTGVGLAF-TAAAKGYKLIITMPASMSTERRIILLAFGVELVLTDPAKGMKGAIAKAEEILA  135 (320)
T ss_dssp             HTTSCCTTTCEEEEECSSHHHHHHHH-HHHHHTCEEEEEEETTSCHHHHHHHHHTTCEEEEECGGGHHHHHHHHHHHHHH
T ss_pred             HcCCCCCCCceEEeeCCchHHHHHHH-HHHhhccceEEeehhhhhhhhhhhhhccCcceEEeeccccccccchhHHHHHH
Confidence            45566676665665 56999999999 99999997666663  3457888899999865432110               


Q ss_pred             ------------CcccHH----HHHHHHHHHhCCCceEEEeCCCCHHHHH---HHHHhcccCCEEEEEc
Q 017868          237 ------------NLQDIA----EEVEKIQKAMGTGIDVSFDCAGLNKTMS---TALGATCAGGKVCLVG  286 (365)
Q Consensus       237 ------------~~~~~~----~~i~~~~~~~~~~~d~vid~~g~~~~~~---~~~~~l~~~G~~~~~g  286 (365)
                                  +..++.    ....++.+.....+|.++-++|+..++.   ..++...+.-+++.+.
T Consensus       136 ~~~~~~~~~~~~~~~n~~~g~~t~~~EI~~q~~~~~D~vv~~vGgGg~~~Gi~~~~k~~~~~~~~igve  204 (320)
T d1z7wa1         136 KTPNGYMLQQFENPANPKIHYETTGPEIWKGTGGKIDGFVSGIGTGGTITGAGKYLKEQNANVKLYGVE  204 (320)
T ss_dssp             HCTTEEECCTTTCTHHHHHHHHTHHHHHHHHTTTCCCEEEEECSSSHHHHHHHHHHHHHCTTCEEEEEE
T ss_pred             hCCCceecccccccchHHHhhhhHHHHHHHhccCCCCEEEeCCCCCcccchhhhhhhhhhcceeeeccc
Confidence                        000011    1112233333467899999888765554   4445566677766553

>d1fcja_ c.79.1.1 (A:) O-acetylserine sulfhydrylase (Cysteine synthase) {Salmonella typhimurium [TaxId: 90371]}

class: Alpha and beta proteins (a/b)
fold: Tryptophan synthase beta subunit-like PLP-dependent enzymes
superfamily: Tryptophan synthase beta subunit-like PLP-dependent enzymes
family: Tryptophan synthase beta subunit-like PLP-dependent enzymes
domain: O-acetylserine sulfhydrylase (Cysteine synthase)
species: Salmonella typhimurium [TaxId: 90371]

Probab=87.83  E-value=5.8  Score=32.06  Aligned_cols=58  Identities=19%  Similarity=0.225  Sum_probs=43.3

Q ss_pred             HHHhcCCCCCCEEEEEcCCHHHHHHHHHHHHHCCCCeEEEEeC--ChhHHHHHHHcCCCEE
Q 017868          173 ACRRANIGPETNVLIMGAGPIGLVTMLGAPRAFGAPRIVIVDV--DDYRLSVAKEIGADNI  231 (365)
Q Consensus       173 ~~~~~~~~~g~~vlI~G~g~~G~~ai~~l~~~~g~~~vi~v~~--~~~~~~~~~~~g~~~~  231 (365)
                      +++...++++.+|+..++|..|.+++- .++.+|.+.++++..  ++.+...++.+|+.-+
T Consensus        52 a~~~g~~~~~~~vv~assGn~g~a~A~-~a~~~g~~~~i~~p~~~~~~k~~~~~~~ga~v~  111 (302)
T d1fcja_          52 AEKRGVLKPGVELVEPTNGNTGIALAY-VAAARGYKLTLTMPETMSIERRKLLKALGANLV  111 (302)
T ss_dssp             HHHHTCCCTTCEEEEECSSHHHHHHHH-HHHHHTCCEEEEEETTSCHHHHHHHHHTTCEEE
T ss_pred             HHHcCCCCCCceEEEeccccchhHHHH-HHHHhccCCceEEeecCcHHHHHHHHHhccceE
Confidence            345667788877666677999998888 889999987777643  4567778888888654

>d2pgda2 c.2.1.6 (A:1-176) 6-phosphogluconate dehydrogenase {Sheep (Ovis orientalis aries) [TaxId: 9940]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: 6-phosphogluconate dehydrogenase-like, N-terminal domain
domain: 6-phosphogluconate dehydrogenase
species: Sheep (Ovis orientalis aries) [TaxId: 9940]

Probab=87.83  E-value=4  Score=30.17  Aligned_cols=44  Identities=11%  Similarity=0.150  Sum_probs=34.4

Q ss_pred             CEEEEEcCCHHHHHHHHHHHHHCCCCeEEEEeCChhHHHHHHHcCC
Q 017868          183 TNVLIMGAGPIGLVTMLGAPRAFGAPRIVIVDVDDYRLSVAKEIGA  228 (365)
Q Consensus       183 ~~vlI~G~g~~G~~ai~~l~~~~g~~~vi~v~~~~~~~~~~~~~g~  228 (365)
                      .+|-+.|.|.+|..++.-|+ ..|+ .|++.++++++.+.+.+.++
T Consensus         3 ~nIg~IGlG~MG~~mA~~L~-~~G~-~V~v~dr~~~~~~~l~~~~~   46 (176)
T d2pgda2           3 ADIALIGLAVMGQNLILNMN-DHGF-VVCAFNRTVSKVDDFLANEA   46 (176)
T ss_dssp             BSEEEECCSHHHHHHHHHHH-HTTC-CEEEECSSTHHHHHHHHTTT
T ss_pred             CcEEEEeEhHHHHHHHHHHH-HCCC-eEEEEcCCHHHHHHHHHhcc
Confidence            46888999999998888455 4598 57888999998887665543

>d1diha1 c.2.1.3 (A:2-130,A:241-273) Dihydrodipicolinate reductase {Escherichia coli [TaxId: 562]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Glyceraldehyde-3-phosphate dehydrogenase-like, N-terminal domain
domain: Dihydrodipicolinate reductase
species: Escherichia coli [TaxId: 562]

Probab=87.79  E-value=0.25  Score=36.84  Aligned_cols=92  Identities=20%  Similarity=0.222  Sum_probs=53.1

Q ss_pred             EEEEEcC-CHHHHHHHHHHHHHCCCCeEEEEeCChhHH---HHHH-----HcCCCEEEeCCCCcccHHHHHHHHHHHhCC
Q 017868          184 NVLIMGA-GPIGLVTMLGAPRAFGAPRIVIVDVDDYRL---SVAK-----EIGADNIVKVSTNLQDIAEEVEKIQKAMGT  254 (365)
Q Consensus       184 ~vlI~G~-g~~G~~ai~~l~~~~g~~~vi~v~~~~~~~---~~~~-----~~g~~~~~~~~~~~~~~~~~i~~~~~~~~~  254 (365)
                      +|.|.|+ |-+|+++++++.+..+++.+.++++.....   +.-+     ..+.....   . .+.       .    -.
T Consensus         6 kI~i~Ga~GrMG~~i~~~i~~~~~~~lv~~~~~~~~~~~g~d~~~~~~~~~~~~~~~~---~-~~~-------~----~~   70 (162)
T d1diha1           6 RVAIAGAGGRMGRQLIQAALALEGVQLGAALEREGSSLLGSDAGELAGAGKTGVTVQS---S-LDA-------V----KD   70 (162)
T ss_dssp             EEEETTTTSHHHHHHHHHHHHSTTEECCCEECCTTCTTCSCCTTCSSSSSCCSCCEES---C-STT-------T----TT
T ss_pred             EEEEECCCCHHHHHHHHHHHhCCCCEEEEEEecccchhccchhhhhhccccCCceeec---c-HHH-------H----hc
Confidence            5788897 999999999555556775555554432211   0000     11111110   0 000       1    25


Q ss_pred             CceEEEeCCCCHHHHHHHHHhcccCCEEEEEccCCCC
Q 017868          255 GIDVSFDCAGLNKTMSTALGATCAGGKVCLVGMGHHE  291 (365)
Q Consensus       255 ~~d~vid~~g~~~~~~~~~~~l~~~G~~~~~g~~~~~  291 (365)
                      .+|++||.+. ++.....++.....+.=+.+|.++.+
T Consensus        71 ~~DViIDFs~-p~~~~~~~~~a~~~~~~~ViGTTG~~  106 (162)
T d1diha1          71 DFDVFIDFTR-PEGTLNHLAFCRQHGKGMVIGTTGFD  106 (162)
T ss_dssp             SCSEEEECSC-HHHHHHHHHHHHHTTCEEEECCCCCC
T ss_pred             ccceEEEecc-HHHHHHHHHHHHhccceeEEecCCCc
Confidence            7899999877 45666666666667777777776543

>d1xtpa_ c.66.1.42 (A:) Hypothetical protein Lmaj004091aaa (LmjF30.0810) {Leishmania major [TaxId: 5664]}

class: Alpha and beta proteins (a/b)
fold: S-adenosyl-L-methionine-dependent methyltransferases
superfamily: S-adenosyl-L-methionine-dependent methyltransferases
family: AD-003 protein-like
domain: Hypothetical protein Lmaj004091aaa (LmjF30.0810)
species: Leishmania major [TaxId: 5664]

Probab=87.78  E-value=1.1  Score=35.87  Aligned_cols=101  Identities=14%  Similarity=0.007  Sum_probs=63.4

Q ss_pred             HhcCCCCCCEEEEEcCCHHHHHHHHHHHHHCCCCeEEEEeCChhHHHHHHHc-CCCEEEeC-CCCcccHHHHHHHHHHHh
Q 017868          175 RRANIGPETNVLIMGAGPIGLVTMLGAPRAFGAPRIVIVDVDDYRLSVAKEI-GADNIVKV-STNLQDIAEEVEKIQKAM  252 (365)
Q Consensus       175 ~~~~~~~g~~vlI~G~g~~G~~ai~~l~~~~g~~~vi~v~~~~~~~~~~~~~-g~~~~~~~-~~~~~~~~~~i~~~~~~~  252 (365)
                      +......+.+||=.|+|. |..+.. ++... +..|.+++.+++-.+.+++. .....+.+ ..+..++.        ..
T Consensus        87 ~~l~~~~~~~vLD~GcG~-G~~t~~-ll~~~-~~~v~~vD~s~~~l~~a~~~~~~~~~~~~~~~d~~~~~--------~~  155 (254)
T d1xtpa_          87 ASLPGHGTSRALDCGAGI-GRITKN-LLTKL-YATTDLLEPVKHMLEEAKRELAGMPVGKFILASMETAT--------LP  155 (254)
T ss_dssp             HTSTTCCCSEEEEETCTT-THHHHH-THHHH-CSEEEEEESCHHHHHHHHHHTTTSSEEEEEESCGGGCC--------CC
T ss_pred             hhCCCCCCCeEEEecccC-ChhhHH-HHhhc-CceEEEEcCCHHHHHhhhccccccccceeEEccccccc--------cC
Confidence            445556778888888865 777777 55443 34799999999988888653 22211211 12212210        11


Q ss_pred             CCCceEEEeCCC-----CH---HHHHHHHHhcccCCEEEEEc
Q 017868          253 GTGIDVSFDCAG-----LN---KTMSTALGATCAGGKVCLVG  286 (365)
Q Consensus       253 ~~~~d~vid~~g-----~~---~~~~~~~~~l~~~G~~~~~g  286 (365)
                      ...+|+|+..--     .+   ..+..+.+.|+++|.+++..
T Consensus       156 ~~~fD~I~~~~vl~hl~d~d~~~~l~~~~~~LkpgG~iii~e  197 (254)
T d1xtpa_         156 PNTYDLIVIQWTAIYLTDADFVKFFKHCQQALTPNGYIFFKE  197 (254)
T ss_dssp             SSCEEEEEEESCGGGSCHHHHHHHHHHHHHHEEEEEEEEEEE
T ss_pred             CCccceEEeeccccccchhhhHHHHHHHHHhcCCCcEEEEEe
Confidence            467999987322     12   34667888999999988753

>d2naca1 c.2.1.4 (A:148-335) Formate dehydrogenase {Pseudomonas sp., strain 101 [TaxId: 306]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Formate/glycerate dehydrogenases, NAD-domain
domain: Formate dehydrogenase
species: Pseudomonas sp., strain 101 [TaxId: 306]

Probab=87.68  E-value=0.51  Score=36.00  Aligned_cols=89  Identities=19%  Similarity=0.126  Sum_probs=55.5

Q ss_pred             CCCEEEEEcCCHHHHHHHHHHHHHCCCCeEEEEeCChhHHHHHHHcCCCEEEeCCCCcccHHHHHHHHHHHhCCCceEEE
Q 017868          181 PETNVLIMGAGPIGLVTMLGAPRAFGAPRIVIVDVDDYRLSVAKEIGADNIVKVSTNLQDIAEEVEKIQKAMGTGIDVSF  260 (365)
Q Consensus       181 ~g~~vlI~G~g~~G~~ai~~l~~~~g~~~vi~v~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~i~~~~~~~~~~~d~vi  260 (365)
                      .+.++.|.|.|.+|...++ .++.+|. .|+..++........+..+....       .++.+    +    -...|+|+
T Consensus        43 ~~~~vgiiG~G~IG~~va~-~l~~fg~-~v~~~d~~~~~~~~~~~~~~~~~-------~~l~~----~----l~~sD~v~  105 (188)
T d2naca1          43 EAMHVGTVAAGRIGLAVLR-RLAPFDV-HLHYTDRHRLPESVEKELNLTWH-------ATRED----M----YPVCDVVT  105 (188)
T ss_dssp             TTCEEEEECCSHHHHHHHH-HHGGGTC-EEEEECSSCCCHHHHHHHTCEEC-------SSHHH----H----GGGCSEEE
T ss_pred             cccceeeccccccchhhhh-hhhccCc-eEEEEeecccccccccccccccc-------CCHHH----H----HHhccchh
Confidence            5789999999999999999 8889999 68888776554445455453321       12211    2    13567776


Q ss_pred             eCCCCHH-----HHHHHHHhcccCCEEEEEc
Q 017868          261 DCAGLNK-----TMSTALGATCAGGKVCLVG  286 (365)
Q Consensus       261 d~~g~~~-----~~~~~~~~l~~~G~~~~~g  286 (365)
                      -+.....     .-...++.|+++..++.++
T Consensus       106 ~~~plt~~T~~li~~~~l~~mk~ga~lIN~a  136 (188)
T d2naca1         106 LNCPLHPETEHMINDETLKLFKRGAYIVNTA  136 (188)
T ss_dssp             ECSCCCTTTTTCBSHHHHTTSCTTEEEEECS
T ss_pred             hcccccccchhhhHHHHHHhCCCCCEEEecC
Confidence            6443211     1124666777666666554

>d1omoa_ c.2.1.13 (A:) Archaeal alanine dehydrogenase {Archaeon Archaeoglobus fulgidus [TaxId: 2234]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Ornithine cyclodeaminase-like
domain: Archaeal alanine dehydrogenase
species: Archaeon Archaeoglobus fulgidus [TaxId: 2234]

Probab=87.59  E-value=1.4  Score=36.65  Aligned_cols=95  Identities=17%  Similarity=0.183  Sum_probs=64.8

Q ss_pred             CCCCEEEEEcCCHHHHHHHHHHHHHCCCCeEEEEeCChhHHHH----HHHcCCCEEEeCCCCcccHHHHHHHHHHHhCCC
Q 017868          180 GPETNVLIMGAGPIGLVTMLGAPRAFGAPRIVIVDVDDYRLSV----AKEIGADNIVKVSTNLQDIAEEVEKIQKAMGTG  255 (365)
Q Consensus       180 ~~g~~vlI~G~g~~G~~ai~~l~~~~g~~~vi~v~~~~~~~~~----~~~~g~~~~~~~~~~~~~~~~~i~~~~~~~~~~  255 (365)
                      +...++.|.|+|..+.+.++.++..+..+.|.+.++++++.+.    ++..+......       ..+.        -.+
T Consensus       123 ~~~~~l~iiGaG~QA~~~~~al~~~~~i~~i~v~~r~~e~~~~~~~~~~~~~~~~~~~-------~~~a--------~~~  187 (320)
T d1omoa_         123 KNSSVFGFIGCGTQAYFQLEALRRVFDIGEVKAYDVREKAAKKFVSYCEDRGISASVQ-------PAEE--------ASR  187 (320)
T ss_dssp             TTCCEEEEECCSHHHHHHHHHHHHHSCCCEEEEECSSHHHHHHHHHHHHHTTCCEEEC-------CHHH--------HTS
T ss_pred             CCccEEEEecCcccHHHHHHHHHHHhhhhhcccccCCHHHHHHHHHHHHhcCCccccc-------hhhh--------hcc
Confidence            4446888899999999888877777899999999998877542    33444443221       1111        147


Q ss_pred             ceEEEeCCCCHHHHHHHHHhcccCCEEEEEccCCC
Q 017868          256 IDVSFDCAGLNKTMSTALGATCAGGKVCLVGMGHH  290 (365)
Q Consensus       256 ~d~vid~~g~~~~~~~~~~~l~~~G~~~~~g~~~~  290 (365)
                      .|+|+-|+.+...+ ...+.++++-++..+|....
T Consensus       188 aDiV~taT~s~~P~-~~~~~l~~G~hv~~iGs~~p  221 (320)
T d1omoa_         188 CDVLVTTTPSRKPV-VKAEWVEEGTHINAIGADGP  221 (320)
T ss_dssp             SSEEEECCCCSSCC-BCGGGCCTTCEEEECSCCST
T ss_pred             ccEEEEeccCcccc-cchhhcCCCCeEeecCCccc
Confidence            99999988754221 12256899999999886543

>d1v9la1 c.2.1.7 (A:180-421) Glutamate dehydrogenase {Pyrobaculum islandicum [TaxId: 2277]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Aminoacid dehydrogenase-like, C-terminal domain
domain: Glutamate dehydrogenase
species: Pyrobaculum islandicum [TaxId: 2277]

Probab=87.58  E-value=0.71  Score=36.77  Aligned_cols=33  Identities=27%  Similarity=0.355  Sum_probs=28.1

Q ss_pred             CCCCEEEEEcCCHHHHHHHHHHHHHCCCCeEEEEe
Q 017868          180 GPETNVLIMGAGPIGLVTMLGAPRAFGAPRIVIVD  214 (365)
Q Consensus       180 ~~g~~vlI~G~g~~G~~ai~~l~~~~g~~~vi~v~  214 (365)
                      -.|.+|+|.|.|.+|..+++ ++...|+ ++++++
T Consensus        29 l~g~~v~IqGfGnVG~~~a~-~L~~~Ga-kvv~vs   61 (242)
T d1v9la1          29 IEGKTVAIQGMGNVGRWTAY-WLEKMGA-KVIAVS   61 (242)
T ss_dssp             CTTCEEEEECCSHHHHHHHH-HHHTTTC-EEEEEE
T ss_pred             CCCCEEEEECCCHHHHHHHH-HHHHcCC-eEEEee
Confidence            47899999999999999999 7778899 566664

>d1n7ha_ c.2.1.2 (A:) GDP-mannose 4,6-dehydratase {Thale-cress (Arabidopsis thaliana) [TaxId: 3702]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Tyrosine-dependent oxidoreductases
domain: GDP-mannose 4,6-dehydratase
species: Thale-cress (Arabidopsis thaliana) [TaxId: 3702]

Probab=87.43  E-value=0.62  Score=38.80  Aligned_cols=32  Identities=19%  Similarity=-0.022  Sum_probs=25.2

Q ss_pred             CEEEEEcC-CHHHHHHHHHHHHHCCCCeEEEEeCC
Q 017868          183 TNVLIMGA-GPIGLVTMLGAPRAFGAPRIVIVDVD  216 (365)
Q Consensus       183 ~~vlI~G~-g~~G~~ai~~l~~~~g~~~vi~v~~~  216 (365)
                      .++||+|+ |-+|..++..| ...|+ .|+++++.
T Consensus         2 k~~LVTGatGfiG~~lv~~L-l~~g~-~V~~~~r~   34 (339)
T d1n7ha_           2 KIALITGITGQDGSYLTEFL-LGKGY-EVHGLIRR   34 (339)
T ss_dssp             CEEEEETTTSHHHHHHHHHH-HHTTC-EEEEEECC
T ss_pred             CEEEEeCCccHHHHHHHHHH-HHCcC-EEEEEECC
Confidence            57899998 99999999945 45699 57777753

>d1vlma_ c.66.1.41 (A:) Possible histamine N-methyltransferase TM1293 {Thermotoga maritima [TaxId: 2336]}

class: Alpha and beta proteins (a/b)
fold: S-adenosyl-L-methionine-dependent methyltransferases
superfamily: S-adenosyl-L-methionine-dependent methyltransferases
family: UbiE/COQ5-like
domain: Possible histamine N-methyltransferase TM1293
species: Thermotoga maritima [TaxId: 2336]

Probab=87.20  E-value=1.1  Score=34.37  Aligned_cols=90  Identities=14%  Similarity=0.176  Sum_probs=59.5

Q ss_pred             CCCCCEEEEEcCCHHHHHHHHHHHHHCCCCeEEEEeCChhHHHHHHHcCCCEEEeCCCCcccHHHHHHHHHHHhCCCceE
Q 017868          179 IGPETNVLIMGAGPIGLVTMLGAPRAFGAPRIVIVDVDDYRLSVAKEIGADNIVKVSTNLQDIAEEVEKIQKAMGTGIDV  258 (365)
Q Consensus       179 ~~~g~~vlI~G~g~~G~~ai~~l~~~~g~~~vi~v~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~i~~~~~~~~~~~d~  258 (365)
                      +.++.+||=.|+|. |..+.. ++      .+++++.+++..+.+++.+.... ..+  ..++.        .....+|+
T Consensus        34 ~~~~~~vLDiGcG~-G~~~~~-~~------~~~giD~s~~~~~~a~~~~~~~~-~~d--~~~l~--------~~~~~fD~   94 (208)
T d1vlma_          34 LLPEGRGVEIGVGT-GRFAVP-LK------IKIGVEPSERMAEIARKRGVFVL-KGT--AENLP--------LKDESFDF   94 (208)
T ss_dssp             HCCSSCEEEETCTT-STTHHH-HT------CCEEEESCHHHHHHHHHTTCEEE-ECB--TTBCC--------SCTTCEEE
T ss_pred             hCCCCeEEEECCCC-cccccc-cc------eEEEEeCChhhcccccccccccc-ccc--ccccc--------cccccccc
Confidence            45677899899863 555544 42      35799999999999988765432 211  12221        11467999


Q ss_pred             EEeCCC-----C-HHHHHHHHHhcccCCEEEEEcc
Q 017868          259 SFDCAG-----L-NKTMSTALGATCAGGKVCLVGM  287 (365)
Q Consensus       259 vid~~g-----~-~~~~~~~~~~l~~~G~~~~~g~  287 (365)
                      |+..-.     . ...+....++|+++|.+++...
T Consensus        95 I~~~~~l~h~~d~~~~l~~~~~~L~pgG~l~i~~~  129 (208)
T d1vlma_          95 ALMVTTICFVDDPERALKEAYRILKKGGYLIVGIV  129 (208)
T ss_dssp             EEEESCGGGSSCHHHHHHHHHHHEEEEEEEEEEEE
T ss_pred             cccccccccccccccchhhhhhcCCCCceEEEEec
Confidence            987322     2 3466788999999999887643

>d1jaya_ c.2.1.6 (A:) Coenzyme F420H2:NADP+ oxidoreductase (FNO) {Archaeon Archaeoglobus fulgidus [TaxId: 2234]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: 6-phosphogluconate dehydrogenase-like, N-terminal domain
domain: Coenzyme F420H2:NADP+ oxidoreductase (FNO)
species: Archaeon Archaeoglobus fulgidus [TaxId: 2234]

Probab=87.10  E-value=0.62  Score=35.18  Aligned_cols=37  Identities=22%  Similarity=0.349  Sum_probs=28.0

Q ss_pred             EEEEE-cCCHHHHHHHHHHHHHCCCCeEEEEeCChhHHHH
Q 017868          184 NVLIM-GAGPIGLVTMLGAPRAFGAPRIVIVDVDDYRLSV  222 (365)
Q Consensus       184 ~vlI~-G~g~~G~~ai~~l~~~~g~~~vi~v~~~~~~~~~  222 (365)
                      +|.|+ |+|.+|.++++ .+...|++ |+...+++++.+.
T Consensus         2 ki~vigGaG~iG~alA~-~la~~G~~-V~l~~R~~e~~~~   39 (212)
T d1jaya_           2 RVALLGGTGNLGKGLAL-RLATLGHE-IVVGSRREEKAEA   39 (212)
T ss_dssp             EEEEETTTSHHHHHHHH-HHHTTTCE-EEEEESSHHHHHH
T ss_pred             EEEEEeCCcHHHHHHHH-HHHHCCCE-EEEEECCHHHHHH
Confidence            57888 56999999999 54566994 6666788877653

>d1vl0a_ c.2.1.2 (A:) DTDP-4-dehydrorhamnose reductase RfbD {Clostridium acetobutylicum [TaxId: 1488]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Tyrosine-dependent oxidoreductases
domain: DTDP-4-dehydrorhamnose reductase RfbD
species: Clostridium acetobutylicum [TaxId: 1488]

Probab=87.08  E-value=0.51  Score=38.08  Aligned_cols=31  Identities=26%  Similarity=0.423  Sum_probs=25.1

Q ss_pred             EEEEEcC-CHHHHHHHHHHHHHCCCCeEEEEeCC
Q 017868          184 NVLIMGA-GPIGLVTMLGAPRAFGAPRIVIVDVD  216 (365)
Q Consensus       184 ~vlI~G~-g~~G~~ai~~l~~~~g~~~vi~v~~~  216 (365)
                      +|||+|+ |-+|..++. .++..|. .|++++++
T Consensus         3 KIlItGasGfiG~~l~~-~L~~~g~-~Vi~~~r~   34 (281)
T d1vl0a_           3 KILITGANGQLGREIQK-QLKGKNV-EVIPTDVQ   34 (281)
T ss_dssp             EEEEESTTSHHHHHHHH-HHTTSSE-EEEEECTT
T ss_pred             EEEEECCCCHHHHHHHH-HHHhCCC-EEEEeech
Confidence            6899997 999999999 6667788 57777654

>d2blla1 c.2.1.2 (A:316-657) Polymyxin resistance protein ArnA (PrmI) {Escherichia coli [TaxId: 562]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Tyrosine-dependent oxidoreductases
domain: Polymyxin resistance protein ArnA (PrmI)
species: Escherichia coli [TaxId: 562]

Probab=86.68  E-value=0.81  Score=38.21  Aligned_cols=73  Identities=18%  Similarity=0.067  Sum_probs=41.0

Q ss_pred             EEEEEcC-CHHHHHHHHHHHHHCCCCeEEEEeCChhHHHHHHH-cCCCEEEeCCC-CcccHHHHHHHHHHHhCCCceEEE
Q 017868          184 NVLIMGA-GPIGLVTMLGAPRAFGAPRIVIVDVDDYRLSVAKE-IGADNIVKVST-NLQDIAEEVEKIQKAMGTGIDVSF  260 (365)
Q Consensus       184 ~vlI~G~-g~~G~~ai~~l~~~~g~~~vi~v~~~~~~~~~~~~-~g~~~~~~~~~-~~~~~~~~i~~~~~~~~~~~d~vi  260 (365)
                      +|||+|+ |-+|..+++.|+ ..|...|++++....+...... -.+. .+..+- +..++.+   ...    .++|.|+
T Consensus         2 KILITG~tGfiG~~l~~~Ll-~~g~~~V~~ld~~~~~~~~~~~~~~~~-~i~~Di~~~~~~~~---~~~----~~~d~Vi   72 (342)
T d2blla1           2 RVLILGVNGFIGNHLTERLL-REDHYEVYGLDIGSDAISRFLNHPHFH-FVEGDISIHSEWIE---YHV----KKCDVVL   72 (342)
T ss_dssp             EEEEETCSSHHHHHHHHHHH-HSTTCEEEEEESCCGGGGGGTTCTTEE-EEECCTTTCSHHHH---HHH----HHCSEEE
T ss_pred             EEEEECCCcHHHHHHHHHHH-HCCCCEEEEEeCCCcchhhhccCCCeE-EEECccCChHHHHH---HHH----hCCCccc
Confidence            6999987 999999998454 5574367888765544332222 1222 222221 1122222   121    3689999


Q ss_pred             eCCCC
Q 017868          261 DCAGL  265 (365)
Q Consensus       261 d~~g~  265 (365)
                      .+++.
T Consensus        73 h~a~~   77 (342)
T d2blla1          73 PLVAI   77 (342)
T ss_dssp             ECBCC
T ss_pred             ccccc
Confidence            97763

>d1y6ja1 c.2.1.5 (A:7-148) Lactate dehydrogenase {Clostridium thermocellum [TaxId: 1515]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: LDH N-terminal domain-like
domain: Lactate dehydrogenase
species: Clostridium thermocellum [TaxId: 1515]

Probab=86.63  E-value=4  Score=29.08  Aligned_cols=36  Identities=28%  Similarity=0.379  Sum_probs=25.1

Q ss_pred             EEEEEcCCHHHHHHHHHHHHHCCCCeEEEEeCChhH
Q 017868          184 NVLIMGAGPIGLVTMLGAPRAFGAPRIVIVDVDDYR  219 (365)
Q Consensus       184 ~vlI~G~g~~G~~ai~~l~~~~g~~~vi~v~~~~~~  219 (365)
                      +|.|.|+|.+|...+..++..--+..++.+|.++++
T Consensus         3 KI~IIGaG~VG~~~a~~l~~~~l~~el~L~D~~~~~   38 (142)
T d1y6ja1           3 KVAIIGAGFVGASAAFTMALRQTANELVLIDVFKEK   38 (142)
T ss_dssp             CEEEECCSHHHHHHHHHHHHTTCSSEEEEECCC---
T ss_pred             eEEEECCCHHHHHHHHHHHhcCCCCEEEEEeccCCc
Confidence            688889999999888745444335578888877765

>d1p3da1 c.5.1.1 (A:11-106) UDP-N-acetylmuramate-alanine ligase MurC {Haemophilus influenzae [TaxId: 727]}

class: Alpha and beta proteins (a/b)
fold: MurCD N-terminal domain
superfamily: MurCD N-terminal domain
family: MurCD N-terminal domain
domain: UDP-N-acetylmuramate-alanine ligase MurC
species: Haemophilus influenzae [TaxId: 727]

Probab=86.59  E-value=1.6  Score=29.01  Aligned_cols=52  Identities=17%  Similarity=0.176  Sum_probs=36.6

Q ss_pred             CCCCCEEEEEcCCHHHHHHHHHHHHHCCCCeEEEEeCCh-hHHHHHHHcCCCEE
Q 017868          179 IGPETNVLIMGAGPIGLVTMLGAPRAFGAPRIVIVDVDD-YRLSVAKEIGADNI  231 (365)
Q Consensus       179 ~~~g~~vlI~G~g~~G~~ai~~l~~~~g~~~vi~v~~~~-~~~~~~~~~g~~~~  231 (365)
                      .+...++.+.|-|++|+.++..+++..|+ .|.+.|..+ ...+.+++.|+...
T Consensus         5 ~~~~~~ihfiGigG~GMs~LA~~L~~~G~-~VsGSD~~~~~~~~~L~~~Gi~v~   57 (96)
T d1p3da1           5 MRRVQQIHFIGIGGAGMSGIAEILLNEGY-QISGSDIADGVVTQRLAQAGAKIY   57 (96)
T ss_dssp             CTTCCEEEEETTTSTTHHHHHHHHHHHTC-EEEEEESCCSHHHHHHHHTTCEEE
T ss_pred             chhCCEEEEEEECHHHHHHHHHHHHhCCC-EEEEEeCCCChhhhHHHHCCCeEE
Confidence            35567899999877887664337788899 688887653 44556677887643

>d1wdka3 c.2.1.6 (A:311-496) Fatty oxidation complex alpha subunit, middle domain {Pseudomonas fragi [TaxId: 296]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: 6-phosphogluconate dehydrogenase-like, N-terminal domain
domain: Fatty oxidation complex alpha subunit, middle domain
species: Pseudomonas fragi [TaxId: 296]

Probab=86.57  E-value=0.48  Score=36.10  Aligned_cols=38  Identities=18%  Similarity=0.352  Sum_probs=29.8

Q ss_pred             CEEEEEcCCHHHHHHHHHHHHHCCCCeEEEEeCChhHHHH
Q 017868          183 TNVLIMGAGPIGLVTMLGAPRAFGAPRIVIVDVDDYRLSV  222 (365)
Q Consensus       183 ~~vlI~G~g~~G~~ai~~l~~~~g~~~vi~v~~~~~~~~~  222 (365)
                      .+|.|.|+|.+|..++. ++...|+ .|...+.+++..+.
T Consensus         5 ~~vaViGaG~mG~~iA~-~~a~~G~-~V~l~D~~~~~l~~   42 (186)
T d1wdka3           5 KQAAVLGAGIMGGGIAY-QSASKGT-PILMKDINEHGIEQ   42 (186)
T ss_dssp             SSEEEECCHHHHHHHHH-HHHHTTC-CEEEECSSHHHHHH
T ss_pred             CEEEEECcCHHHHHHHH-HHHhCCC-eEEEEECCHHHHhh
Confidence            57899999999998888 4445599 58888888876543

>d1djqa3 c.4.1.1 (A:341-489,A:646-729) Trimethylamine dehydrogenase, middle domain {Methylophilus methylotrophus, w3a1 [TaxId: 17]}

class: Alpha and beta proteins (a/b)
fold: Nucleotide-binding domain
superfamily: Nucleotide-binding domain
family: N-terminal domain of adrenodoxin reductase-like
domain: Trimethylamine dehydrogenase, middle domain
species: Methylophilus methylotrophus, w3a1 [TaxId: 17]

Probab=86.52  E-value=0.45  Score=37.60  Aligned_cols=37  Identities=27%  Similarity=0.386  Sum_probs=29.6

Q ss_pred             CCCCCEEEEEcCCHHHHHHHHHHHHHCCCCeEEEEeCCh
Q 017868          179 IGPETNVLIMGAGPIGLVTMLGAPRAFGAPRIVIVDVDD  217 (365)
Q Consensus       179 ~~~g~~vlI~G~g~~G~~ai~~l~~~~g~~~vi~v~~~~  217 (365)
                      -+.+++|+|.|+|+.|+.++. .++..|. .+..++.++
T Consensus        46 ~~~~k~VvIIGaGpAGl~aA~-~l~~~G~-~v~l~E~~~   82 (233)
T d1djqa3          46 TKNKDSVLIVGAGPSGSEAAR-VLMESGY-TVHLTDTAE   82 (233)
T ss_dssp             CSSCCEEEEECCSHHHHHHHH-HHHHTTC-EEEEECSSS
T ss_pred             ccCCceEEEEcccHHHHHHHH-HHHHhcc-ceeeEeecc
Confidence            357789999999999999999 6667798 577776554

>d1xgka_ c.2.1.2 (A:) Negative transcriptional regulator NmrA {Aspergillus nidulans [TaxId: 162425]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Tyrosine-dependent oxidoreductases
domain: Negative transcriptional regulator NmrA
species: Aspergillus nidulans [TaxId: 162425]

Probab=86.46  E-value=0.93  Score=37.98  Aligned_cols=36  Identities=19%  Similarity=0.172  Sum_probs=26.4

Q ss_pred             CCCEEEEEcC-CHHHHHHHHHHHHHCCCCeEEEEeCChh
Q 017868          181 PETNVLIMGA-GPIGLVTMLGAPRAFGAPRIVIVDVDDY  218 (365)
Q Consensus       181 ~g~~vlI~G~-g~~G~~ai~~l~~~~g~~~vi~v~~~~~  218 (365)
                      +.++|||+|+ |.+|..++..| ...|.+ |.++.++..
T Consensus         2 ~kktIlVtGatG~iG~~lv~~L-l~~G~~-V~~l~R~~~   38 (350)
T d1xgka_           2 QKKTIAVVGATGRQGASLIRVA-AAVGHH-VRAQVHSLK   38 (350)
T ss_dssp             CCCCEEEESTTSHHHHHHHHHH-HHTTCC-EEEEESCSC
T ss_pred             CCCEEEEECCChHHHHHHHHHH-HhCCCe-EEEEECCcc
Confidence            4578999987 99999999944 456996 455545443

>d2dula1 c.66.1.58 (A:3-377) N(2),N(2)-dimethylguanosine tRNA methyltransferase Trm1 {Pyrococcus horikoshii [TaxId: 53953]}

class: Alpha and beta proteins (a/b)
fold: S-adenosyl-L-methionine-dependent methyltransferases
superfamily: S-adenosyl-L-methionine-dependent methyltransferases
family: TRM1-like
domain: N(2),N(2)-dimethylguanosine tRNA methyltransferase Trm1
species: Pyrococcus horikoshii [TaxId: 53953]

Probab=86.35  E-value=2.9  Score=35.41  Aligned_cols=93  Identities=15%  Similarity=0.110  Sum_probs=60.3

Q ss_pred             cCCHHHHHHHHHHHHHCCCCeEEEEeCChhHHHHHHH----cCCCE--------EEeCC----CCcccHHHHHHHHHHHh
Q 017868          189 GAGPIGLVTMLGAPRAFGAPRIVIVDVDDYRLSVAKE----IGADN--------IVKVS----TNLQDIAEEVEKIQKAM  252 (365)
Q Consensus       189 G~g~~G~~ai~~l~~~~g~~~vi~v~~~~~~~~~~~~----~g~~~--------~~~~~----~~~~~~~~~i~~~~~~~  252 (365)
                      +.++.|.-.+. +++..|++.|+..|.+++..+++++    -+...        .....    ....|....+.+    .
T Consensus        52 ~~sasG~rsiR-ya~E~~~~~V~~nDis~~A~~~i~~N~~lN~~~~~~~~~~~~~~~~~~~~~~~~~Da~~~~~~----~  126 (375)
T d2dula1          52 ALSATGIRGIR-FALETPAEEVWLNDISEDAYELMKRNVMLNFDGELRESKGRAILKGEKTIVINHDDANRLMAE----R  126 (375)
T ss_dssp             SSCTTSHHHHH-HHHHSSCSEEEEEESCHHHHHHHHHHHHHHCCSCCEECSSEEEEESSSEEEEEESCHHHHHHH----S
T ss_pred             cCCCccHHHHH-HHHhCCCCEEEEecCCHHHHHHHHHHHHhcCccccccccccccccccceeEeehhhhhhhhHh----h
Confidence            44666888888 8888899899999999988877654    12211        00000    011233333322    2


Q ss_pred             CCCceEE-EeCCCCH-HHHHHHHHhcccCCEEEEEc
Q 017868          253 GTGIDVS-FDCAGLN-KTMSTALGATCAGGKVCLVG  286 (365)
Q Consensus       253 ~~~~d~v-id~~g~~-~~~~~~~~~l~~~G~~~~~g  286 (365)
                      +..+|+| ||..|++ ..++.++++++.+|-+....
T Consensus       127 ~~~fDvIDiDPfGs~~pfldsAi~a~~~~Gll~vTa  162 (375)
T d2dula1         127 HRYFHFIDLDPFGSPMEFLDTALRSAKRRGILGVTA  162 (375)
T ss_dssp             TTCEEEEEECCSSCCHHHHHHHHHHEEEEEEEEEEE
T ss_pred             cCcCCcccCCCCCCcHHHHHHHHHHhccCCEEEEEe
Confidence            5679966 8888873 46778999999888887654

>d1mlda1 c.2.1.5 (A:1-144) Malate dehydrogenase {Pig (Sus scrofa) [TaxId: 9823]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: LDH N-terminal domain-like
domain: Malate dehydrogenase
species: Pig (Sus scrofa) [TaxId: 9823]

Probab=86.32  E-value=2.9  Score=29.96  Aligned_cols=72  Identities=21%  Similarity=0.255  Sum_probs=43.6

Q ss_pred             EEEEEcC-CHHHHHHHHHHHHHCC-CCeEEEEeCChhHHHHHHHcCCCE---EEeCCCCcccHHHHHHHHHHHhCCCceE
Q 017868          184 NVLIMGA-GPIGLVTMLGAPRAFG-APRIVIVDVDDYRLSVAKEIGADN---IVKVSTNLQDIAEEVEKIQKAMGTGIDV  258 (365)
Q Consensus       184 ~vlI~G~-g~~G~~ai~~l~~~~g-~~~vi~v~~~~~~~~~~~~~g~~~---~~~~~~~~~~~~~~i~~~~~~~~~~~d~  258 (365)
                      +|.|.|| |.+|..++. ++...+ ++.++.++.++.+.+.+.-.-+..   .... -...++.+.+        .+.|+
T Consensus         2 Kv~IiGA~G~VG~~~A~-~l~~~~~~~elvLiDi~~~~~~a~Dl~~~~~~~~~~~~-~~~~~~~~~~--------~~aDi   71 (144)
T d1mlda1           2 KVAVLGASGGIGQPLSL-LLKNSPLVSRLTLYDIAHTPGVAADLSHIETRATVKGY-LGPEQLPDCL--------KGCDV   71 (144)
T ss_dssp             EEEEETTTSTTHHHHHH-HHHTCTTCSEEEEEESSSHHHHHHHHTTSSSSCEEEEE-ESGGGHHHHH--------TTCSE
T ss_pred             eEEEECCCChHHHHHHH-HHHhCCccceEEEEeccccchhhHHHhhhhhhcCCCeE-EcCCChHHHh--------CCCCE
Confidence            6889997 999999988 545555 478888988776544432222211   1111 0112332222        57999


Q ss_pred             EEeCCCC
Q 017868          259 SFDCAGL  265 (365)
Q Consensus       259 vid~~g~  265 (365)
                      |+-+.|.
T Consensus        72 vVitag~   78 (144)
T d1mlda1          72 VVIPAGV   78 (144)
T ss_dssp             EEECCSC
T ss_pred             EEECCCc
Confidence            9998883

>d1kewa_ c.2.1.2 (A:) dTDP-glucose 4,6-dehydratase (RmlB) {Streptococcus suis, serotype 2 [TaxId: 1307]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Tyrosine-dependent oxidoreductases
domain: dTDP-glucose 4,6-dehydratase (RmlB)
species: Streptococcus suis, serotype 2 [TaxId: 1307]

Probab=86.31  E-value=0.21  Score=42.64  Aligned_cols=31  Identities=26%  Similarity=0.308  Sum_probs=24.9

Q ss_pred             EEEEEcC-CHHHHHHHHHHHHHCCCCeEEEEeC
Q 017868          184 NVLIMGA-GPIGLVTMLGAPRAFGAPRIVIVDV  215 (365)
Q Consensus       184 ~vlI~G~-g~~G~~ai~~l~~~~g~~~vi~v~~  215 (365)
                      +|||+|+ |-+|..++..|+ ..|..++++++.
T Consensus         2 kILItG~tGfIGs~l~~~L~-~~g~~vv~~~d~   33 (361)
T d1kewa_           2 KILITGGAGFIGSAVVRHII-KNTQDTVVNIDK   33 (361)
T ss_dssp             EEEEESTTSHHHHHHHHHHH-HHCSCEEEEEEC
T ss_pred             EEEEECCCcHHHHHHHHHHH-HCCCCEEEEEeC
Confidence            6999987 899999999554 558877888764

>d1qyca_ c.2.1.2 (A:) Phenylcoumaran benzylic ether reductase {Loblolly pine (Pinus taeda) [TaxId: 3352]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Tyrosine-dependent oxidoreductases
domain: Phenylcoumaran benzylic ether reductase
species: Loblolly pine (Pinus taeda) [TaxId: 3352]

Probab=86.31  E-value=0.94  Score=36.60  Aligned_cols=33  Identities=27%  Similarity=0.489  Sum_probs=25.2

Q ss_pred             CCEEEEEcC-CHHHHHHHHHHHHHCCCCeEEEEeCC
Q 017868          182 ETNVLIMGA-GPIGLVTMLGAPRAFGAPRIVIVDVD  216 (365)
Q Consensus       182 g~~vlI~G~-g~~G~~ai~~l~~~~g~~~vi~v~~~  216 (365)
                      -.+|||+|+ |-+|..++. .+...|.+ |++++++
T Consensus         3 kkKILVtGatG~iG~~l~~-~L~~~G~~-V~~l~R~   36 (307)
T d1qyca_           3 RSRILLIGATGYIGRHVAK-ASLDLGHP-TFLLVRE   36 (307)
T ss_dssp             CCCEEEESTTSTTHHHHHH-HHHHTTCC-EEEECCC
T ss_pred             CCEEEEECCCcHHHHHHHH-HHHHCCCe-EEEEECC
Confidence            368999998 999999999 44566985 5666554

>d1z45a2 c.2.1.2 (A:11-357) Uridine diphosphogalactose-4-epimerase (UDP-galactose 4-epimerase) {Baker's yeast (Saccharomyces cerevisiae) [TaxId: 4932]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Tyrosine-dependent oxidoreductases
domain: Uridine diphosphogalactose-4-epimerase (UDP-galactose 4-epimerase)
species: Baker's yeast (Saccharomyces cerevisiae) [TaxId: 4932]

Probab=86.29  E-value=1.4  Score=36.80  Aligned_cols=30  Identities=33%  Similarity=0.410  Sum_probs=23.0

Q ss_pred             CEEEEEcC-CHHHHHHHHHHHHHCCCCeEEEEe
Q 017868          183 TNVLIMGA-GPIGLVTMLGAPRAFGAPRIVIVD  214 (365)
Q Consensus       183 ~~vlI~G~-g~~G~~ai~~l~~~~g~~~vi~v~  214 (365)
                      +.|||+|+ |-+|..++..|+ ..|. .|++++
T Consensus         2 K~ILVTGatGfIG~~lv~~Ll-~~g~-~V~~~d   32 (347)
T d1z45a2           2 KIVLVTGGAGYIGSHTVVELI-ENGY-DCVVAD   32 (347)
T ss_dssp             CEEEEETTTSHHHHHHHHHHH-HTTC-EEEEEE
T ss_pred             CEEEEeCCCcHHHHHHHHHHH-HCcC-eEEEEE
Confidence            46899987 999999999454 5588 566664

>d1j4aa1 c.2.1.4 (A:104-300) D-lactate dehydrogenase {Lactobacillus helveticus [TaxId: 1587]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Formate/glycerate dehydrogenases, NAD-domain
domain: D-lactate dehydrogenase
species: Lactobacillus helveticus [TaxId: 1587]

Probab=86.21  E-value=0.49  Score=36.45  Aligned_cols=87  Identities=18%  Similarity=0.160  Sum_probs=54.4

Q ss_pred             CCCEEEEEcCCHHHHHHHHHHHHHCCCCeEEEEeCChhHHHHHHHcCCCEEEeCCCCcccHHHHHHHHHHHhCCCceEEE
Q 017868          181 PETNVLIMGAGPIGLVTMLGAPRAFGAPRIVIVDVDDYRLSVAKEIGADNIVKVSTNLQDIAEEVEKIQKAMGTGIDVSF  260 (365)
Q Consensus       181 ~g~~vlI~G~g~~G~~ai~~l~~~~g~~~vi~v~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~i~~~~~~~~~~~d~vi  260 (365)
                      .|.+|.|+|.|.+|..+++ +++.+|+ +|++.+........  ..+..    .    .++.+.+        ...|+++
T Consensus        42 ~gk~vgIiG~G~IG~~va~-~l~~fg~-~V~~~d~~~~~~~~--~~~~~----~----~~l~~~l--------~~sDii~  101 (197)
T d1j4aa1          42 RDQVVGVVGTGHIGQVFMQ-IMEGFGA-KVITYDIFRNPELE--KKGYY----V----DSLDDLY--------KQADVIS  101 (197)
T ss_dssp             GGSEEEEECCSHHHHHHHH-HHHHTTC-EEEEECSSCCHHHH--HTTCB----C----SCHHHHH--------HHCSEEE
T ss_pred             cCCeEEEecccccchhHHH-hHhhhcc-cccccCcccccccc--cceee----e----ccccccc--------ccccccc
Confidence            5789999999999999999 8899999 67888765443222  11211    1    2333322        2368887


Q ss_pred             eCCCC-HHH---H-HHHHHhcccCCEEEEEcc
Q 017868          261 DCAGL-NKT---M-STALGATCAGGKVCLVGM  287 (365)
Q Consensus       261 d~~g~-~~~---~-~~~~~~l~~~G~~~~~g~  287 (365)
                      -+... +.+   + ...++.|+++..++..+.
T Consensus       102 ~~~plt~~T~~li~~~~l~~mk~~a~lIN~sR  133 (197)
T d1j4aa1         102 LHVPDVPANVHMINDESIAKMKQDVVIVNVSR  133 (197)
T ss_dssp             ECSCCCGGGTTCBSHHHHHHSCTTEEEEECSC
T ss_pred             ccCCccccccccccHHHHhhhCCccEEEecCc
Confidence            75542 111   1 246677877777776643

>d1ebda2 c.3.1.5 (A:155-271) Dihydrolipoamide dehydrogenase {Bacillus stearothermophilus [TaxId: 1422]}

class: Alpha and beta proteins (a/b)
fold: FAD/NAD(P)-binding domain
superfamily: FAD/NAD(P)-binding domain
family: FAD/NAD-linked reductases, N-terminal and central domains
domain: Dihydrolipoamide dehydrogenase
species: Bacillus stearothermophilus [TaxId: 1422]

Probab=86.18  E-value=0.64  Score=32.21  Aligned_cols=35  Identities=23%  Similarity=0.420  Sum_probs=27.4

Q ss_pred             CCCEEEEEcCCHHHHHHHHHHHHHCCCCeEEEEeCCh
Q 017868          181 PETNVLIMGAGPIGLVTMLGAPRAFGAPRIVIVDVDD  217 (365)
Q Consensus       181 ~g~~vlI~G~g~~G~~ai~~l~~~~g~~~vi~v~~~~  217 (365)
                      ..++++|.|+|.+|.=+++ .+..+|.+ |..+.+.+
T Consensus        21 ~p~~v~IiGgG~ig~E~A~-~l~~~G~~-Vtlve~~~   55 (117)
T d1ebda2          21 VPKSLVVIGGGYIGIELGT-AYANFGTK-VTILEGAG   55 (117)
T ss_dssp             CCSEEEEECCSHHHHHHHH-HHHHTTCE-EEEEESSS
T ss_pred             cCCeEEEECCCccceeeee-eecccccE-EEEEEecc
Confidence            3479999999999999999 66788995 55555544

>d2nvwa1 c.2.1.3 (A:2-154,A:374-457) Galactose/lactose metabolism regulatory protein GAL80 {Yeast (Kluyveromyces lactis) [TaxId: 28985]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Glyceraldehyde-3-phosphate dehydrogenase-like, N-terminal domain
domain: Galactose/lactose metabolism regulatory protein GAL80
species: Yeast (Kluyveromyces lactis) [TaxId: 28985]

Probab=86.07  E-value=1.7  Score=34.21  Aligned_cols=93  Identities=6%  Similarity=0.003  Sum_probs=55.7

Q ss_pred             CEEEEEcCCH----HHHHHHHHHHHH-CCCCeEEEEeCChhHH-HHHHHcCCCEEEeCCCCcccHHHHHHHHHHHhCCCc
Q 017868          183 TNVLIMGAGP----IGLVTMLGAPRA-FGAPRIVIVDVDDYRL-SVAKEIGADNIVKVSTNLQDIAEEVEKIQKAMGTGI  256 (365)
Q Consensus       183 ~~vlI~G~g~----~G~~ai~~l~~~-~g~~~vi~v~~~~~~~-~~~~~~g~~~~~~~~~~~~~~~~~i~~~~~~~~~~~  256 (365)
                      =+|.|.|+|.    ++...+..+.+. -+++.+.+.+++.++. +++++++......|+    ++.+.+    +  ...+
T Consensus        17 irvgiIG~G~~~~~~~~~h~~ai~~~~~~~~ivav~d~~~~~~~~~~~~~~~~~~~~~~----~~~~l~----~--~~~i   86 (237)
T d2nvwa1          17 IRVGFVGLTSGKSWVAKTHFLAIQQLSSQFQIVALYNPTLKSSLQTIEQLQLKHATGFD----SLESFA----Q--YKDI   86 (237)
T ss_dssp             EEEEEECCCSTTSHHHHTHHHHHHHTTTTEEEEEEECSCHHHHHHHHHHTTCTTCEEES----CHHHHH----H--CTTC
T ss_pred             eEEEEEecCccccHHHHHHHHHHHhcCCCeEEEEEEcCCHHHHHHHHHhcccccceeec----chhhcc----c--cccc
Confidence            4688888765    444334312222 2465454567766665 466888865433332    333332    2  4689


Q ss_pred             eEEEeCCCCHHHHHHHHHhcccC-----CEEEEE
Q 017868          257 DVSFDCAGLNKTMSTALGATCAG-----GKVCLV  285 (365)
Q Consensus       257 d~vid~~g~~~~~~~~~~~l~~~-----G~~~~~  285 (365)
                      |+|+.|+....+.+....+|..+     +.-+++
T Consensus        87 D~V~i~tp~~~h~~~~~~al~aG~~~~~~k~V~~  120 (237)
T d2nvwa1          87 DMIVVSVKVPEHYEVVKNILEHSSQNLNLRYLYV  120 (237)
T ss_dssp             SEEEECSCHHHHHHHHHHHHHHSSSCSSCCEEEE
T ss_pred             ceeeccCCCcchhhHHHHHHHhcccccCCceEEE
Confidence            99999998777777777777654     345555

>d2pv7a2 c.2.1.6 (A:92-243) Prephenate dehydrogenase TyrA {Haemophilus influenzae [TaxId: 727]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: 6-phosphogluconate dehydrogenase-like, N-terminal domain
domain: Prephenate dehydrogenase TyrA
species: Haemophilus influenzae [TaxId: 727]

Probab=86.02  E-value=4.5  Score=28.92  Aligned_cols=87  Identities=20%  Similarity=0.263  Sum_probs=54.0

Q ss_pred             CEEEEEc-CCHHHHHHHHHHHHHCCCCeEEEEeCChhHHHHHHHcCCCEEEeCCCCcccHHHHHHHHHHHhCCCceEEEe
Q 017868          183 TNVLIMG-AGPIGLVTMLGAPRAFGAPRIVIVDVDDYRLSVAKEIGADNIVKVSTNLQDIAEEVEKIQKAMGTGIDVSFD  261 (365)
Q Consensus       183 ~~vlI~G-~g~~G~~ai~~l~~~~g~~~vi~v~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~i~~~~~~~~~~~d~vid  261 (365)
                      .+|.|.| .|.+|...+. .++..|+ .|.+.+++..........+++.++... ........+.++.... ..=.+++|
T Consensus        10 ~kI~iIGg~G~mG~~la~-~L~~~G~-~V~~~d~~~~~~~~~~~~~~~~v~~~~-~~~~~~~v~~~~~~~~-~~~~iiiD   85 (152)
T d2pv7a2          10 HKIVIVGGYGKLGGLFAR-YLRASGY-PISILDREDWAVAESILANADVVIVSV-PINLTLETIERLKPYL-TENMLLAD   85 (152)
T ss_dssp             CCEEEETTTSHHHHHHHH-HHHTTTC-CEEEECTTCGGGHHHHHTTCSEEEECS-CGGGHHHHHHHHGGGC-CTTSEEEE
T ss_pred             CeEEEEcCCCHHHHHHHH-HHHHcCC-CcEecccccccccchhhhhcccccccc-chhhheeeeecccccc-cCCceEEE
Confidence            5899999 6999999999 6667799 577788777665555555677665543 2334444444443221 22347888


Q ss_pred             CCCCHHHHHHHH
Q 017868          262 CAGLNKTMSTAL  273 (365)
Q Consensus       262 ~~g~~~~~~~~~  273 (365)
                      +..........+
T Consensus        86 ~~Svk~~~~~~~   97 (152)
T d2pv7a2          86 LTSVKREPLAKM   97 (152)
T ss_dssp             CCSCCHHHHHHH
T ss_pred             ecccCHHHHHHH
Confidence            776543333333

>d1gtma1 c.2.1.7 (A:181-419) Glutamate dehydrogenase {Archaeon Pyrococcus furiosus [TaxId: 2261]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Aminoacid dehydrogenase-like, C-terminal domain
domain: Glutamate dehydrogenase
species: Archaeon Pyrococcus furiosus [TaxId: 2261]

Probab=85.93  E-value=1  Score=35.67  Aligned_cols=34  Identities=24%  Similarity=0.304  Sum_probs=27.5

Q ss_pred             CCCCEEEEEcCCHHHHHHHHHHHHHCCCCeEEEEe
Q 017868          180 GPETNVLIMGAGPIGLVTMLGAPRAFGAPRIVIVD  214 (365)
Q Consensus       180 ~~g~~vlI~G~g~~G~~ai~~l~~~~g~~~vi~v~  214 (365)
                      -.|.+|+|.|.|.+|..++++|++..|+ +++++.
T Consensus        30 l~g~~v~IqGfGnVG~~~a~~L~~~~G~-kvv~vs   63 (239)
T d1gtma1          30 LKGKTIAIQGYGNAGYYLAKIMSEDFGM-KVVAVS   63 (239)
T ss_dssp             STTCEEEEECCSHHHHHHHHHHHHTTCC-EEEEEE
T ss_pred             cCCCEEEEECCCHHHHHHHHHHHHhcCc-ceeecc
Confidence            3789999999999999999956667788 566653

>d1onfa2 c.3.1.5 (A:154-270) Glutathione reductase {Plasmodium falciparum [TaxId: 5833]}

class: Alpha and beta proteins (a/b)
fold: FAD/NAD(P)-binding domain
superfamily: FAD/NAD(P)-binding domain
family: FAD/NAD-linked reductases, N-terminal and central domains
domain: Glutathione reductase
species: Plasmodium falciparum [TaxId: 5833]

Probab=85.90  E-value=0.79  Score=31.80  Aligned_cols=67  Identities=16%  Similarity=0.170  Sum_probs=42.1

Q ss_pred             CCCCCCEEEEEcCCHHHHHHHHHHHHHCCCCeEEEEeCChhHHHHHHHcCCCEEEeCCCCcccHHHHHHHHHHHhCCCce
Q 017868          178 NIGPETNVLIMGAGPIGLVTMLGAPRAFGAPRIVIVDVDDYRLSVAKEIGADNIVKVSTNLQDIAEEVEKIQKAMGTGID  257 (365)
Q Consensus       178 ~~~~g~~vlI~G~g~~G~~ai~~l~~~~g~~~vi~v~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~i~~~~~~~~~~~d  257 (365)
                      .++..++|+|.|+|.+|.=++. .++.+|.+ |..+.+.+.-              ...-+++..+.+++..+  ..+++
T Consensus        18 ~l~~p~~v~IiGgG~iG~E~A~-~l~~~g~~-Vtlv~~~~~i--------------l~~~d~~~~~~~~~~l~--~~gV~   79 (117)
T d1onfa2          18 NIKESKKIGIVGSGYIAVELIN-VIKRLGID-SYIFARGNRI--------------LRKFDESVINVLENDMK--KNNIN   79 (117)
T ss_dssp             TCCCCSEEEEECCSHHHHHHHH-HHHTTTCE-EEEECSSSSS--------------CTTSCHHHHHHHHHHHH--HTTCE
T ss_pred             ccCCCCEEEEECCchHHHHHHH-HHHhcccc-ceeeehhccc--------------cccccHHHHHHHHHHHH--hCCCE
Confidence            4455689999999999998888 66788984 5666553321              01112455555555443  35677


Q ss_pred             EEEeC
Q 017868          258 VSFDC  262 (365)
Q Consensus       258 ~vid~  262 (365)
                      +..++
T Consensus        80 i~~~~   84 (117)
T d1onfa2          80 IVTFA   84 (117)
T ss_dssp             EECSC
T ss_pred             EEECC
Confidence            76653

>d1b5qa1 c.3.1.2 (A:5-293,A:406-463) Polyamine oxidase {Maize (Zea mays) [TaxId: 4577]}

class: Alpha and beta proteins (a/b)
fold: FAD/NAD(P)-binding domain
superfamily: FAD/NAD(P)-binding domain
family: FAD-linked reductases, N-terminal domain
domain: Polyamine oxidase
species: Maize (Zea mays) [TaxId: 4577]

Probab=85.64  E-value=0.34  Score=38.64  Aligned_cols=33  Identities=24%  Similarity=0.475  Sum_probs=25.8

Q ss_pred             EEEEEcCCHHHHHHHHHHHHHCCCCeEEEEeCCh
Q 017868          184 NVLIMGAGPIGLVTMLGAPRAFGAPRIVIVDVDD  217 (365)
Q Consensus       184 ~vlI~G~g~~G~~ai~~l~~~~g~~~vi~v~~~~  217 (365)
                      +|+|+|+|..|+.++. .++..|.+.|.+++.++
T Consensus         2 ~V~IIGaG~aGL~aA~-~L~~~G~~~V~vlE~~~   34 (347)
T d1b5qa1           2 RVIVVGAGMSGISAAK-RLSEAGITDLLILEATD   34 (347)
T ss_dssp             CEEEECCBHHHHHHHH-HHHHTTCCCEEEECSSS
T ss_pred             CEEEECCcHHHHHHHH-HHHhCCCCcEEEEECCC
Confidence            5899999999998888 55566975577777654

>d1ek6a_ c.2.1.2 (A:) Uridine diphosphogalactose-4-epimerase (UDP-galactose 4-epimerase) {Human (Homo sapiens) [TaxId: 9606]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Tyrosine-dependent oxidoreductases
domain: Uridine diphosphogalactose-4-epimerase (UDP-galactose 4-epimerase)
species: Human (Homo sapiens) [TaxId: 9606]

Probab=85.44  E-value=1.6  Score=36.39  Aligned_cols=30  Identities=37%  Similarity=0.480  Sum_probs=23.4

Q ss_pred             CEEEEEcC-CHHHHHHHHHHHHHCCCCeEEEEe
Q 017868          183 TNVLIMGA-GPIGLVTMLGAPRAFGAPRIVIVD  214 (365)
Q Consensus       183 ~~vlI~G~-g~~G~~ai~~l~~~~g~~~vi~v~  214 (365)
                      ++|||+|+ |-+|..++..| ...|.+ |++++
T Consensus         3 kKILITG~tGfIGs~lv~~L-l~~g~~-V~~ld   33 (346)
T d1ek6a_           3 EKVLVTGGAGYIGSHTVLEL-LEAGYL-PVVID   33 (346)
T ss_dssp             SEEEEETTTSHHHHHHHHHH-HHTTCC-EEEEE
T ss_pred             CeEEEECCCcHHHHHHHHHH-HHCcCE-EEEEE
Confidence            58999987 99999999945 456884 66664

>d1dssg1 c.2.1.3 (G:1-148,G:313-334) Glyceraldehyde-3-phosphate dehydrogenase (GAPDH) {South China Sea lobster (Palinurus versicolor) [TaxId: 150436]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Glyceraldehyde-3-phosphate dehydrogenase-like, N-terminal domain
domain: Glyceraldehyde-3-phosphate dehydrogenase (GAPDH)
species: South China Sea lobster (Palinurus versicolor) [TaxId: 150436]

Probab=85.41  E-value=1.5  Score=32.52  Aligned_cols=97  Identities=16%  Similarity=0.192  Sum_probs=58.0

Q ss_pred             EEEEEcCCHHHHHHHHHHHHHCCCCeEEEEeCC--hhHHHHHHHcCCCE--------------------EEeCCCCcccH
Q 017868          184 NVLIMGAGPIGLVTMLGAPRAFGAPRIVIVDVD--DYRLSVAKEIGADN--------------------IVKVSTNLQDI  241 (365)
Q Consensus       184 ~vlI~G~g~~G~~ai~~l~~~~g~~~vi~v~~~--~~~~~~~~~~g~~~--------------------~~~~~~~~~~~  241 (365)
                      +|.|.|-|-+|.++.. .+...+.+.+..-+..  .+....+-++...+                    +..+...+++ 
T Consensus         2 kIgINGfGRIGR~~~R-~~~~~~~~ivaINd~~~~~~~~~yLlkyDS~hG~~~~~i~~~~~~l~ing~~I~~~~~~~p~-   79 (169)
T d1dssg1           2 KIGINGFGRIGRLVLR-AALEMGAQVVAVNDPFIALEYMVYMFKYDSTHGMFKGEVKAEDGALVVDGKKITVFNEMKPE-   79 (169)
T ss_dssp             CEEEECCSHHHHHHHH-HHHHHTCCEEEEECTTSCHHHHHHHHHCCTTTCCCSSCEEEETTEEEETTEEEEEECCSSGG-
T ss_pred             eEEEECCcHHHHHHHH-HHHhCCCcEEEECCCCcCHHHHHHHHhcccccCCcCCeEEEeCCEEEECCEEEEEEecCChH-
Confidence            5788999999999999 4445588544443432  34555555553211                    0011111111 


Q ss_pred             HHHHHHHHHHhCCCceEEEeCCCCHHHHHHHHHhcccCCEEEEEccC
Q 017868          242 AEEVEKIQKAMGTGIDVSFDCAGLNKTMSTALGATCAGGKVCLVGMG  288 (365)
Q Consensus       242 ~~~i~~~~~~~~~~~d~vid~~g~~~~~~~~~~~l~~~G~~~~~g~~  288 (365)
                        .+ .|.   ..++|+||||+|.-...+.+..++..+.+-++++-+
T Consensus        80 --~i-~W~---~~gvD~ViEcTG~f~~~~~~~~hl~~gakkViisaP  120 (169)
T d1dssg1          80 --NI-PWS---KAGAEYIVESTGVFTTIEKASAHFKGGAKKVIISAP  120 (169)
T ss_dssp             --GC-CHH---HHTCCEEEECSSSCCSHHHHGGGGTTTCSEEEESSC
T ss_pred             --HC-Ccc---ccCCCEEEecCceEcCHHHHHHHHhcCCceEeecCC
Confidence              01 121   247999999999765667777888888777777543

>d1u8fo1 c.2.1.3 (O:3-151,O:316-335) Glyceraldehyde-3-phosphate dehydrogenase (GAPDH) {Human(Homo sapiens), liver isoform [TaxId: 9606]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Glyceraldehyde-3-phosphate dehydrogenase-like, N-terminal domain
domain: Glyceraldehyde-3-phosphate dehydrogenase (GAPDH)
species: Human(Homo sapiens), liver isoform [TaxId: 9606]

Probab=85.08  E-value=2.3  Score=31.55  Aligned_cols=99  Identities=19%  Similarity=0.199  Sum_probs=57.5

Q ss_pred             EEEEEcCCHHHHHHHHHHHHHCCCCeEEEE-eC--ChhHHHHHHHcCCCE-----E-------EeCCC------CcccHH
Q 017868          184 NVLIMGAGPIGLVTMLGAPRAFGAPRIVIV-DV--DDYRLSVAKEIGADN-----I-------VKVST------NLQDIA  242 (365)
Q Consensus       184 ~vlI~G~g~~G~~ai~~l~~~~g~~~vi~v-~~--~~~~~~~~~~~g~~~-----~-------~~~~~------~~~~~~  242 (365)
                      +|.|.|-|-+|.++..++...-.. .++++ +.  +.+....+-++...+     .       +.++.      ...+. 
T Consensus         3 kIgINGFGRIGR~v~R~~~~~~~~-~ivaINd~~~~~~~~ayLlkyDS~hG~~~~~v~~~~~~l~i~~~~I~~~~~~~p-   80 (169)
T d1u8fo1           3 KVGVNGFGRIGRLVTRAAFNSGKV-DIVAINDPFIDLNYMVYMFQYDSTHGKFHGTVKAENGKLVINGNPITIFQERDP-   80 (169)
T ss_dssp             EEEEECCSHHHHHHHHHHHHHCSS-EEEEEECSSSCHHHHHHHHHCCTTTCSCSSCEEEETTEEEETTEEEEEECCSSG-
T ss_pred             EEEEECCcHHHHHHHHHHHHCCCc-EEEEecCCCccHHHHHHHHhhccccCCcCCeEEEECCEEEECCEEEEEEECCCh-
Confidence            678999999999999855555556 45555 42  234455555543211     0       00000      00111 


Q ss_pred             HHHHHHHHHhCCCceEEEeCCCCHHHHHHHHHhcccCCEEEEEccC
Q 017868          243 EEVEKIQKAMGTGIDVSFDCAGLNKTMSTALGATCAGGKVCLVGMG  288 (365)
Q Consensus       243 ~~i~~~~~~~~~~~d~vid~~g~~~~~~~~~~~l~~~G~~~~~g~~  288 (365)
                      +.+ .|   ...++|+|+||+|.-.....+..++..+.+-++++.+
T Consensus        81 ~~i-~W---~~~~vDiViEcTG~f~~~~~~~~hl~~gakkViiSaP  122 (169)
T d1u8fo1          81 SKI-KW---GDAGAEYVVESTGVFTTMEKAGAHLQGGAKRVIISAP  122 (169)
T ss_dssp             GGC-CT---TTTTCCEEEECSSSCCSHHHHGGGGGGTCSEEEESSC
T ss_pred             hhC-Cc---cccCCCEEEEecceeccHHHHHHHHhcCCceEeeccc
Confidence            011 01   1358999999999755556677788888777777543

>d1uh5a_ c.2.1.2 (A:) Enoyl-ACP reductase {Malaria parasite (Plasmodium falciparum) [TaxId: 5833]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Tyrosine-dependent oxidoreductases
domain: Enoyl-ACP reductase
species: Malaria parasite (Plasmodium falciparum) [TaxId: 5833]

Probab=84.89  E-value=4  Score=33.67  Aligned_cols=35  Identities=17%  Similarity=0.060  Sum_probs=24.0

Q ss_pred             CCEEEEEcCC---HHHHHHHHHHHHHCCCCeEEEEeCChh
Q 017868          182 ETNVLIMGAG---PIGLVTMLGAPRAFGAPRIVIVDVDDY  218 (365)
Q Consensus       182 g~~vlI~G~g---~~G~~ai~~l~~~~g~~~vi~v~~~~~  218 (365)
                      ++..||+|++   ++|.++++.++ ..|++ |+.+.+.+.
T Consensus         2 ~kVAlITGaa~s~GIG~aiA~~la-~~GA~-V~i~~~~~~   39 (329)
T d1uh5a_           2 EDICFIAGIGDTNGYGWGIAKELS-KRNVK-IIFGIWPPV   39 (329)
T ss_dssp             CCEEEEECCSSSSSHHHHHHHHHH-HTTCE-EEEEECGGG
T ss_pred             CcEEEEeCCCCCChHHHHHHHHHH-HcCCE-EEEEeCchh
Confidence            4567889843   89999999554 66995 555544443

>d1db3a_ c.2.1.2 (A:) GDP-mannose 4,6-dehydratase {Escherichia coli [TaxId: 562]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Tyrosine-dependent oxidoreductases
domain: GDP-mannose 4,6-dehydratase
species: Escherichia coli [TaxId: 562]

Probab=84.77  E-value=2  Score=35.95  Aligned_cols=33  Identities=18%  Similarity=0.041  Sum_probs=24.5

Q ss_pred             CEEEEEcC-CHHHHHHHHHHHHHCCCCeEEEEeCCh
Q 017868          183 TNVLIMGA-GPIGLVTMLGAPRAFGAPRIVIVDVDD  217 (365)
Q Consensus       183 ~~vlI~G~-g~~G~~ai~~l~~~~g~~~vi~v~~~~  217 (365)
                      +.|||+|+ |-+|..++..| ...|. .|+++++..
T Consensus         2 K~vLITGatGfiGs~lv~~L-l~~g~-~V~~~~r~~   35 (357)
T d1db3a_           2 KVALITGVTGQDGSYLAEFL-LEKGY-EVHGIKRRA   35 (357)
T ss_dssp             CEEEEETTTSHHHHHHHHHH-HHTTC-EEEEECC--
T ss_pred             CEEEEeCCCcHHHHHHHHHH-HHCcC-EEEEEECCC
Confidence            56889987 89999999945 45698 577887643

>d1b26a1 c.2.1.7 (A:179-412) Glutamate dehydrogenase {Thermotoga maritima [TaxId: 2336]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Aminoacid dehydrogenase-like, C-terminal domain
domain: Glutamate dehydrogenase
species: Thermotoga maritima [TaxId: 2336]

Probab=84.66  E-value=1.1  Score=35.26  Aligned_cols=34  Identities=24%  Similarity=0.444  Sum_probs=27.6

Q ss_pred             CCCCEEEEEcCCHHHHHHHHHHHHHCCCCeEEEEe
Q 017868          180 GPETNVLIMGAGPIGLVTMLGAPRAFGAPRIVIVD  214 (365)
Q Consensus       180 ~~g~~vlI~G~g~~G~~ai~~l~~~~g~~~vi~v~  214 (365)
                      -.|.+|+|.|.|.+|..++++|.+..|+ ++++++
T Consensus        29 l~g~~vaIqG~GnVG~~~a~~L~~e~Ga-~vv~vs   62 (234)
T d1b26a1          29 PKKATVAVQGFGNVGQFAALLISQELGS-KVVAVS   62 (234)
T ss_dssp             TTTCEEEEECCSHHHHHHHHHHHHHHCC-EEEEEE
T ss_pred             cCCCEEEEECCCHHHHHHHHHHHHhcCC-ceEEee
Confidence            3688999999999999999955577899 566654

>d1dxya1 c.2.1.4 (A:101-299) D-2-hydroxyisocaproate dehydrogenase {Lactobacillus casei [TaxId: 1582]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Formate/glycerate dehydrogenases, NAD-domain
domain: D-2-hydroxyisocaproate dehydrogenase
species: Lactobacillus casei [TaxId: 1582]

Probab=84.48  E-value=0.48  Score=36.57  Aligned_cols=35  Identities=31%  Similarity=0.512  Sum_probs=30.3

Q ss_pred             CCCEEEEEcCCHHHHHHHHHHHHHCCCCeEEEEeCCh
Q 017868          181 PETNVLIMGAGPIGLVTMLGAPRAFGAPRIVIVDVDD  217 (365)
Q Consensus       181 ~g~~vlI~G~g~~G~~ai~~l~~~~g~~~vi~v~~~~  217 (365)
                      .|.+|.|+|.|.+|+.+++ +++.+|+ +|++.++..
T Consensus        44 ~~ktvgIiG~G~IG~~va~-~l~~fg~-~v~~~d~~~   78 (199)
T d1dxya1          44 GQQTVGVMGTGHIGQVAIK-LFKGFGA-KVIAYDPYP   78 (199)
T ss_dssp             GGSEEEEECCSHHHHHHHH-HHHHTTC-EEEEECSSC
T ss_pred             cceeeeeeecccccccccc-cccccce-eeeccCCcc
Confidence            5689999999999999999 8899999 678887643

>d1bgva1 c.2.1.7 (A:195-449) Glutamate dehydrogenase {Clostridium symbiosum [TaxId: 1512]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Aminoacid dehydrogenase-like, C-terminal domain
domain: Glutamate dehydrogenase
species: Clostridium symbiosum [TaxId: 1512]

Probab=84.15  E-value=1  Score=36.12  Aligned_cols=40  Identities=18%  Similarity=0.205  Sum_probs=29.9

Q ss_pred             HHHHhcC-CCCCCEEEEEcCCHHHHHHHHHHHHHCCCCeEEEE
Q 017868          172 HACRRAN-IGPETNVLIMGAGPIGLVTMLGAPRAFGAPRIVIV  213 (365)
Q Consensus       172 ~~~~~~~-~~~g~~vlI~G~g~~G~~ai~~l~~~~g~~~vi~v  213 (365)
                      .+++..+ --.|.+|+|.|.|.+|..+++ ++...|+ +++++
T Consensus        25 ~~~~~~~~~l~g~~v~IQGfGnVG~~~a~-~L~e~Ga-kvvav   65 (255)
T d1bgva1          25 AVMKHENDTLVGKTVALAGFGNVAWGAAK-KLAELGA-KAVTL   65 (255)
T ss_dssp             HHHHHTTCCSTTCEEEECCSSHHHHHHHH-HHHHHTC-EEEEE
T ss_pred             HHHHhCCCCCCCCEEEEECCCHHHHHHHH-HHHHcCC-eEEEE
Confidence            3344433 237889999999999999999 6677899 46655

>d1k0ia1 c.3.1.2 (A:1-173,A:276-394) p-Hydroxybenzoate hydroxylase, PHBH {Pseudomonas aeruginosa [TaxId: 287]}

class: Alpha and beta proteins (a/b)
fold: FAD/NAD(P)-binding domain
superfamily: FAD/NAD(P)-binding domain
family: FAD-linked reductases, N-terminal domain
domain: p-Hydroxybenzoate hydroxylase, PHBH
species: Pseudomonas aeruginosa [TaxId: 287]

Probab=84.11  E-value=0.43  Score=38.90  Aligned_cols=32  Identities=34%  Similarity=0.467  Sum_probs=26.0

Q ss_pred             EEEEEcCCHHHHHHHHHHHHHCCCCeEEEEeCCh
Q 017868          184 NVLIMGAGPIGLVTMLGAPRAFGAPRIVIVDVDD  217 (365)
Q Consensus       184 ~vlI~G~g~~G~~ai~~l~~~~g~~~vi~v~~~~  217 (365)
                      .|+|.|+|+.|++++. .++..|. .|.+++..+
T Consensus         4 ~V~IvGaGp~Gl~~A~-~L~~~G~-~v~vlE~~~   35 (292)
T d1k0ia1           4 QVAIIGAGPSGLLLGQ-LLHKAGI-DNVILERQT   35 (292)
T ss_dssp             SEEEECCSHHHHHHHH-HHHHHTC-CEEEECSSC
T ss_pred             CEEEECcCHHHHHHHH-HHHHCCC-CEEEEeCCC
Confidence            5899999999999999 5556699 577887654

>d1jqea_ c.66.1.19 (A:) Histamine methyltransferase {Human (Homo sapiens) [TaxId: 9606]}

class: Alpha and beta proteins (a/b)
fold: S-adenosyl-L-methionine-dependent methyltransferases
superfamily: S-adenosyl-L-methionine-dependent methyltransferases
family: Histamine methyltransferase
domain: Histamine methyltransferase
species: Human (Homo sapiens) [TaxId: 9606]

Probab=83.82  E-value=0.8  Score=37.15  Aligned_cols=105  Identities=14%  Similarity=0.133  Sum_probs=55.3

Q ss_pred             CCCCCEEEEEcCCHHHHHHHH---HHHHHC-CCC-eEEEEeCChhHHHHHHHc-C----CCE-EEeCCCCcccHHHHHHH
Q 017868          179 IGPETNVLIMGAGPIGLVTML---GAPRAF-GAP-RIVIVDVDDYRLSVAKEI-G----ADN-IVKVSTNLQDIAEEVEK  247 (365)
Q Consensus       179 ~~~g~~vlI~G~g~~G~~ai~---~l~~~~-g~~-~vi~v~~~~~~~~~~~~~-g----~~~-~~~~~~~~~~~~~~i~~  247 (365)
                      .++.-+||=.|+|. |..+..   .+.... +.. .+++++.++...+.+++. .    ... ...+..  ..+.+....
T Consensus        38 ~~~~~~VLDiGcG~-G~~~~~ll~~l~~~~~~~~~~~~~vD~s~~~l~~a~~~~~~~~~~~~~~~~~~~--~~~~~~~~~  114 (280)
T d1jqea_          38 TKSEIKILSIGGGA-GEIDLQILSKVQAQYPGVCINNEVVEPSAEQIAKYKELVAKISNLENVKFAWHK--ETSSEYQSR  114 (280)
T ss_dssp             TCSEEEEEEETCTT-SHHHHHHHHHHHHHSTTCEEEEEEECCCHHHHHHHHHHHTTCCSCTTEEEEEEC--SCHHHHHHH
T ss_pred             CCCCCeEEEEcCCC-CHHHHHHHHHhhhhccCCceEEEEEeCcHHHHHHHHHHHhhccccccccccchh--hhhhhhcch
Confidence            34555788888743 333333   122222 221 468889888877766543 1    111 111111  111111111


Q ss_pred             HH-HHhCCCceEEEeCCC-----C-HHHHHHHHHhcccCCEEEEEc
Q 017868          248 IQ-KAMGTGIDVSFDCAG-----L-NKTMSTALGATCAGGKVCLVG  286 (365)
Q Consensus       248 ~~-~~~~~~~d~vid~~g-----~-~~~~~~~~~~l~~~G~~~~~g  286 (365)
                      .. ......+|+|+..-.     . ...+..+.++|+++|.++...
T Consensus       115 ~~~~~~~~~fD~I~~~~~l~~~~d~~~~l~~l~~~LkpgG~l~i~~  160 (280)
T d1jqea_         115 MLEKKELQKWDFIHMIQMLYYVKDIPATLKFFHSLLGTNAKMLIIV  160 (280)
T ss_dssp             HTTSSSCCCEEEEEEESCGGGCSCHHHHHHHHHHTEEEEEEEEEEE
T ss_pred             hcccCCCCceeEEEEccceecCCCHHHHHHHHHhhCCCCCEEEEEE
Confidence            11 112568999987322     2 357788999999999987764

>d1qp8a1 c.2.1.4 (A:83-263) Putative formate dehydrogenase {Archaeon Pyrobaculum aerophilum [TaxId: 13773]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Formate/glycerate dehydrogenases, NAD-domain
domain: Putative formate dehydrogenase
species: Archaeon Pyrobaculum aerophilum [TaxId: 13773]

Probab=83.59  E-value=0.77  Score=34.73  Aligned_cols=83  Identities=19%  Similarity=0.168  Sum_probs=53.9

Q ss_pred             CCCEEEEEcCCHHHHHHHHHHHHHCCCCeEEEEeCChhHHHHHHHcCCCEEEeCCCCcccHHHHHHHHHHHhCCCceEEE
Q 017868          181 PETNVLIMGAGPIGLVTMLGAPRAFGAPRIVIVDVDDYRLSVAKEIGADNIVKVSTNLQDIAEEVEKIQKAMGTGIDVSF  260 (365)
Q Consensus       181 ~g~~vlI~G~g~~G~~ai~~l~~~~g~~~vi~v~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~i~~~~~~~~~~~d~vi  260 (365)
                      .|.+|.|+|.|.+|..+++ +++.+|+ +|++.+++...       +...      ...++.+.+        ...|+|+
T Consensus        41 ~gk~vgIiG~G~IG~~va~-~l~~~g~-~v~~~d~~~~~-------~~~~------~~~~l~ell--------~~sDiv~   97 (181)
T d1qp8a1          41 QGEKVAVLGLGEIGTRVGK-ILAALGA-QVRGFSRTPKE-------GPWR------FTNSLEEAL--------REARAAV   97 (181)
T ss_dssp             TTCEEEEESCSTHHHHHHH-HHHHTTC-EEEEECSSCCC-------SSSC------CBSCSHHHH--------TTCSEEE
T ss_pred             cCceEEEecccccccccee-eeecccc-ccccccccccc-------ccee------eeechhhhh--------hccchhh
Confidence            5789999999999999999 8899999 68888765421       1110      011222221        4678887


Q ss_pred             eCCCCH-HHH----HHHHHhcccCCEEEEEc
Q 017868          261 DCAGLN-KTM----STALGATCAGGKVCLVG  286 (365)
Q Consensus       261 d~~g~~-~~~----~~~~~~l~~~G~~~~~g  286 (365)
                      -+.... .+.    ...++.++++..++..+
T Consensus        98 ~~~pl~~~t~~li~~~~l~~mk~~ailIN~~  128 (181)
T d1qp8a1          98 CALPLNKHTRGLVKYQHLALMAEDAVFVNVG  128 (181)
T ss_dssp             ECCCCSTTTTTCBCHHHHTTSCTTCEEEECS
T ss_pred             cccccccccccccccceeeeccccceEEecc
Confidence            755321 111    25677788888877765

>d1ixka_ c.66.1.38 (A:) Hypothetical methyltransferase PH1374 {Archaeon Pyrococcus horikoshii [TaxId: 53953]}

class: Alpha and beta proteins (a/b)
fold: S-adenosyl-L-methionine-dependent methyltransferases
superfamily: S-adenosyl-L-methionine-dependent methyltransferases
family: NOL1/NOP2/sun
domain: Hypothetical methyltransferase PH1374
species: Archaeon Pyrococcus horikoshii [TaxId: 53953]

Probab=83.56  E-value=5  Score=32.89  Aligned_cols=100  Identities=21%  Similarity=0.240  Sum_probs=60.5

Q ss_pred             HhcCCCCCCEEEEE-cC-CHHHHHHHHHHHHHCCCCeEEEEeCChhHHH----HHHHcCCCEEEeCCCCcccHHHHHHHH
Q 017868          175 RRANIGPETNVLIM-GA-GPIGLVTMLGAPRAFGAPRIVIVDVDDYRLS----VAKEIGADNIVKVSTNLQDIAEEVEKI  248 (365)
Q Consensus       175 ~~~~~~~g~~vlI~-G~-g~~G~~ai~~l~~~~g~~~vi~v~~~~~~~~----~~~~~g~~~~~~~~~~~~~~~~~i~~~  248 (365)
                      ....+++|++||=. .| |+--..+++ +.+  +-..+++.+.++.|..    .++++|...++....+...+.      
T Consensus       110 ~~l~~~~g~~vlD~CAapGgKt~~l~~-~~~--~~~~i~a~d~~~~r~~~l~~~~~r~~~~~i~~~~~d~~~~~------  180 (313)
T d1ixka_         110 VALDPKPGEIVADMAAAPGGKTSYLAQ-LMR--NDGVIYAFDVDENRLRETRLNLSRLGVLNVILFHSSSLHIG------  180 (313)
T ss_dssp             HHHCCCTTCEEEECCSSCSHHHHHHHH-HTT--TCSEEEEECSCHHHHHHHHHHHHHHTCCSEEEESSCGGGGG------
T ss_pred             hcccCCccceeeecccchhhhhHhhhh-hcc--cccceeeeccCHHHHHHHHHHHHHHHhhccccccccccccc------
Confidence            34578999998765 33 543333333 221  2236889999988875    456678776665544332221      


Q ss_pred             HHHhCCCceEEEe---CCCCH-------------------------HHHHHHHHhcccCCEEEEE
Q 017868          249 QKAMGTGIDVSFD---CAGLN-------------------------KTMSTALGATCAGGKVCLV  285 (365)
Q Consensus       249 ~~~~~~~~d~vid---~~g~~-------------------------~~~~~~~~~l~~~G~~~~~  285 (365)
                        .....||.|+-   |+|..                         ..+..++..++++|+++..
T Consensus       181 --~~~~~fD~ILvDaPCSg~G~~~r~p~~~~~~~~~~~~~l~~~Q~~iL~~a~~~lk~gG~lVYs  243 (313)
T d1ixka_         181 --ELNVEFDKILLDAPCTGSGTIHKNPERKWNRTMDDIKFCQGLQMRLLEKGLEVLKPGGILVYS  243 (313)
T ss_dssp             --GGCCCEEEEEEECCTTSTTTCC--------CCHHHHHHHHHHHHHHHHHHHHHEEEEEEEEEE
T ss_pred             --cccccccEEEEccccccCCceeeccchhhhhhhhHHHHHHHHHHHHHHhhhheeCCCcEEEEe
Confidence              12567888754   66532                         2555688889999987654

>d1kyqa1 c.2.1.11 (A:1-150) Bifunctional dehydrogenase/ferrochelatase Met8p, N-terminal domain {Baker's yeast (Saccharomyces cerevisiae) [TaxId: 4932]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Siroheme synthase N-terminal domain-like
domain: Bifunctional dehydrogenase/ferrochelatase Met8p, N-terminal domain
species: Baker's yeast (Saccharomyces cerevisiae) [TaxId: 4932]

Probab=83.55  E-value=0.6  Score=34.02  Aligned_cols=31  Identities=23%  Similarity=0.577  Sum_probs=25.3

Q ss_pred             CCCEEEEEcCCHHHHHHHHHHHHHCCCCeEEEE
Q 017868          181 PETNVLIMGAGPIGLVTMLGAPRAFGAPRIVIV  213 (365)
Q Consensus       181 ~g~~vlI~G~g~~G~~ai~~l~~~~g~~~vi~v  213 (365)
                      .|.+|||.|+|.+|.--+. .+...|++ |.++
T Consensus        12 ~gkrvLViGgG~va~~ka~-~Ll~~GA~-VtVv   42 (150)
T d1kyqa1          12 KDKRILLIGGGEVGLTRLY-KLMPTGCK-LTLV   42 (150)
T ss_dssp             TTCEEEEEEESHHHHHHHH-HHGGGTCE-EEEE
T ss_pred             CCCEEEEECCCHHHHHHHH-HHHHCCCE-EEEE
Confidence            6789999999999999999 55666995 5555

>d1mx3a1 c.2.1.4 (A:126-318) Transcription corepressor CtbP {Human (Homo sapiens), Ctbp1 [TaxId: 9606]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Formate/glycerate dehydrogenases, NAD-domain
domain: Transcription corepressor CtbP
species: Human (Homo sapiens), Ctbp1 [TaxId: 9606]

Probab=83.48  E-value=0.68  Score=35.48  Aligned_cols=89  Identities=17%  Similarity=0.232  Sum_probs=53.4

Q ss_pred             CCCEEEEEcCCHHHHHHHHHHHHHCCCCeEEEEeCChhHHHHHHHcCCCEEEeCCCCcccHHHHHHHHHHHhCCCceEEE
Q 017868          181 PETNVLIMGAGPIGLVTMLGAPRAFGAPRIVIVDVDDYRLSVAKEIGADNIVKVSTNLQDIAEEVEKIQKAMGTGIDVSF  260 (365)
Q Consensus       181 ~g~~vlI~G~g~~G~~ai~~l~~~~g~~~vi~v~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~i~~~~~~~~~~~d~vi  260 (365)
                      .|.+|.|+|.|.+|...++ +++.+|+ +|++.++.... +.....+....       .++.+.++        ..|+|+
T Consensus        48 ~gktvgIiG~G~IG~~va~-~l~~fg~-~v~~~d~~~~~-~~~~~~~~~~~-------~~l~~ll~--------~sD~i~  109 (193)
T d1mx3a1          48 RGETLGIIGLGRVGQAVAL-RAKAFGF-NVLFYDPYLSD-GVERALGLQRV-------STLQDLLF--------HSDCVT  109 (193)
T ss_dssp             TTCEEEEECCSHHHHHHHH-HHHTTTC-EEEEECTTSCT-THHHHHTCEEC-------SSHHHHHH--------HCSEEE
T ss_pred             eCceEEEecccccccccee-eeecccc-ceeeccCcccc-cchhhhccccc-------cchhhccc--------cCCEEE
Confidence            6789999999999999999 8899999 57777654332 22233343221       23322222        357776


Q ss_pred             eCCCC-HHH----HHHHHHhcccCCEEEEEcc
Q 017868          261 DCAGL-NKT----MSTALGATCAGGKVCLVGM  287 (365)
Q Consensus       261 d~~g~-~~~----~~~~~~~l~~~G~~~~~g~  287 (365)
                      -+... +.+    -...++.|+++..++..+.
T Consensus       110 ~~~plt~~T~~li~~~~l~~mk~~a~lIN~sR  141 (193)
T d1mx3a1         110 LHCGLNEHNHHLINDFTVKQMRQGAFLVNTAR  141 (193)
T ss_dssp             ECCCCCTTCTTSBSHHHHTTSCTTEEEEECSC
T ss_pred             EeecccccchhhhhHHHHhccCCCCeEEecCC
Confidence            54432 111    1145667777776666543

>d1d7oa_ c.2.1.2 (A:) Enoyl-ACP reductase {Oil seed rape (Brassica napus) [TaxId: 3708]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Tyrosine-dependent oxidoreductases
domain: Enoyl-ACP reductase
species: Oil seed rape (Brassica napus) [TaxId: 3708]

Probab=83.45  E-value=0.73  Score=37.70  Aligned_cols=36  Identities=19%  Similarity=0.144  Sum_probs=26.6

Q ss_pred             CCCEEEEEcC-C--HHHHHHHHHHHHHCCCCeEEEEeCChh
Q 017868          181 PETNVLIMGA-G--PIGLVTMLGAPRAFGAPRIVIVDVDDY  218 (365)
Q Consensus       181 ~g~~vlI~G~-g--~~G~~ai~~l~~~~g~~~vi~v~~~~~  218 (365)
                      +|+++||+|+ |  ++|.++++.+ ...|++ |+.+.+++.
T Consensus         7 ~gK~alVTGass~~GIG~aiA~~l-a~~Ga~-Vvi~~~~~~   45 (297)
T d1d7oa_           7 RGKRAFIAGIADDNGYGWAVAKSL-AAAGAE-ILVGTWVPA   45 (297)
T ss_dssp             TTCEEEEECCSSSSSHHHHHHHHH-HHTTCE-EEEEEEHHH
T ss_pred             CCCEEEEECCCCCchHHHHHHHHH-HHCCCE-EEEEeCchh
Confidence            6789999997 4  7999999945 456995 566655443

>d2i76a2 c.2.1.6 (A:2-154) Hypothetical protein TM1727 {Thermotoga maritima [TaxId: 2336]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: 6-phosphogluconate dehydrogenase-like, N-terminal domain
domain: Hypothetical protein TM1727
species: Thermotoga maritima [TaxId: 2336]

Probab=83.43  E-value=0.56  Score=34.22  Aligned_cols=80  Identities=13%  Similarity=0.002  Sum_probs=45.7

Q ss_pred             EEEcCCHHHHHHHHHHHHHCCCCeEEEEeCChhHHHHHHHcCCCEEEeCCCCcccHHHHHHHHHHHhCCCceEEEeCCCC
Q 017868          186 LIMGAGPIGLVTMLGAPRAFGAPRIVIVDVDDYRLSVAKEIGADNIVKVSTNLQDIAEEVEKIQKAMGTGIDVSFDCAGL  265 (365)
Q Consensus       186 lI~G~g~~G~~ai~~l~~~~g~~~vi~v~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~i~~~~~~~~~~~d~vid~~g~  265 (365)
                      -+.|+|.+|.+++. .++. +.....+..++.++.+.+.+.+.....+.    .+.           -...|+||-|+..
T Consensus         3 gfIG~G~mg~~l~~-~L~~-~~~~~~v~~R~~~~~~~l~~~~~~~~~~~----~~~-----------~~~~DiVil~v~d   65 (153)
T d2i76a2           3 NFVGTGTLTRFFLE-CLKD-RYEIGYILSRSIDRARNLAEVYGGKAATL----EKH-----------PELNGVVFVIVPD   65 (153)
T ss_dssp             EEESCCHHHHHHHH-TTC-----CCCEECSSHHHHHHHHHHTCCCCCSS----CCC-----------CC---CEEECSCT
T ss_pred             EEEeCcHHHHHHHH-HHHh-CCCEEEEEeCChhhhcchhhcccccccch----hhh-----------hccCcEEEEeccc
Confidence            35799999999998 4444 44344456788888776655443222111    111           2567999999875


Q ss_pred             HHHHHHHHHhcccCCEEE
Q 017868          266 NKTMSTALGATCAGGKVC  283 (365)
Q Consensus       266 ~~~~~~~~~~l~~~G~~~  283 (365)
                      . .+......++..+.++
T Consensus        66 ~-~i~~v~~~l~~~~~iv   82 (153)
T d2i76a2          66 R-YIKTVANHLNLGDAVL   82 (153)
T ss_dssp             T-THHHHHTTTCCSSCCE
T ss_pred             h-hhhHHHhhhcccceee
Confidence            4 5666667776555543

>d1yzha1 c.66.1.53 (A:8-211) tRNA (guanine-N(7)-)-methyltransferase TrmB {Streptococcus pneumoniae [TaxId: 1313]}

class: Alpha and beta proteins (a/b)
fold: S-adenosyl-L-methionine-dependent methyltransferases
superfamily: S-adenosyl-L-methionine-dependent methyltransferases
family: TrmB-like
domain: tRNA (guanine-N(7)-)-methyltransferase TrmB
species: Streptococcus pneumoniae [TaxId: 1313]

Probab=83.42  E-value=3  Score=31.90  Aligned_cols=95  Identities=16%  Similarity=0.119  Sum_probs=61.7

Q ss_pred             CEEEEEcCCHHHHHHHHHHHHHCCCCeEEEEeCChhHHHH----HHHcCCCEEEeCCCCcccHHHHHHHHHHHhCCCceE
Q 017868          183 TNVLIMGAGPIGLVTMLGAPRAFGAPRIVIVDVDDYRLSV----AKEIGADNIVKVSTNLQDIAEEVEKIQKAMGTGIDV  258 (365)
Q Consensus       183 ~~vlI~G~g~~G~~ai~~l~~~~g~~~vi~v~~~~~~~~~----~~~~g~~~~~~~~~~~~~~~~~i~~~~~~~~~~~d~  258 (365)
                      ..||=+|+|. |..++. +|+...-..+++++.++.....    +++.+...+..+..+..++...+      ....+|.
T Consensus        33 plvLdIGcG~-G~~~~~-lA~~~p~~~~iGid~~~~~v~~a~~~~~~~~l~Ni~~~~~da~~l~~~~------~~~~~~~  104 (204)
T d1yzha1          33 PIHVEVGSGK-GAFVSG-MAKQNPDINYIGIDIQKSVLSYALDKVLEVGVPNIKLLWVDGSDLTDYF------EDGEIDR  104 (204)
T ss_dssp             CEEEEESCTT-SHHHHH-HHHHCTTSEEEEEESCHHHHHHHHHHHHHHCCSSEEEEECCSSCGGGTS------CTTCCSE
T ss_pred             CeEEEEeccC-CHHHHH-HHHHCCCCceEEEeccHHHHHHHHHhhhhhccccceeeecCHHHHhhhc------cCCceeh
Confidence            3455568865 888888 7777666689999998875543    45567765544334333432211      1356777


Q ss_pred             EEeCCCC--------------HHHHHHHHHhcccCCEEEEE
Q 017868          259 SFDCAGL--------------NKTMSTALGATCAGGKVCLV  285 (365)
Q Consensus       259 vid~~g~--------------~~~~~~~~~~l~~~G~~~~~  285 (365)
                      |+-..-.              +..+....++|+++|.+.+.
T Consensus       105 i~i~fPdPw~K~~h~krRl~~~~~l~~~~~~LkpgG~l~i~  145 (204)
T d1yzha1         105 LYLNFSDPWPKKRHEKRRLTYKTFLDTFKRILPENGEIHFK  145 (204)
T ss_dssp             EEEESCCCCCSGGGGGGSTTSHHHHHHHHHHSCTTCEEEEE
T ss_pred             hcccccccccchhhhhhhhhHHHHHHHHHHhCCCCcEEEEE
Confidence            7654332              35677889999999998764

>d1tdja1 c.79.1.1 (A:5-335) Threonine deaminase {Escherichia coli [TaxId: 562]}

class: Alpha and beta proteins (a/b)
fold: Tryptophan synthase beta subunit-like PLP-dependent enzymes
superfamily: Tryptophan synthase beta subunit-like PLP-dependent enzymes
family: Tryptophan synthase beta subunit-like PLP-dependent enzymes
domain: Threonine deaminase
species: Escherichia coli [TaxId: 562]

Probab=83.35  E-value=6.2  Score=32.43  Aligned_cols=103  Identities=13%  Similarity=0.209  Sum_probs=62.6

Q ss_pred             CCCEEEEEcCCHHHHHHHHHHHHHCCCCeEEEEe--CChhHHHHHHHcCCCEEEeCCCCcccHHHHH-------------
Q 017868          181 PETNVLIMGAGPIGLVTMLGAPRAFGAPRIVIVD--VDDYRLSVAKEIGADNIVKVSTNLQDIAEEV-------------  245 (365)
Q Consensus       181 ~g~~vlI~G~g~~G~~ai~~l~~~~g~~~vi~v~--~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~i-------------  245 (365)
                      +..+|+...+|..|.+++. .++..|.+.++.+.  .+.+|.+.++.+|+.-+. ............             
T Consensus        74 ~~~~vv~assGN~g~a~A~-~a~~~g~~~~i~~p~~~~~~k~~~l~~~Ga~vi~-~~~~~~~~~~~~~~~~~~~~~~~~~  151 (331)
T d1tdja1          74 KAHGVITASAGNHAQGVAF-SSARLGVKALIVMPTATADIKVDAVRGFGGEVLL-HGANFDEAKAKAIELSQQQGFTWVP  151 (331)
T ss_dssp             CSSSCEEEECSSSHHHHHH-HHHHTTCCEEEECCSSCCHHHHHHHHHHSCEEEC-CCSSHHHHHHHHHHHHHHHCCEECC
T ss_pred             CCCeeeecccchhHHHHHH-hhccccccceeeccccchhHHHHHHHhcCCEEEE-cCcccccchhhhhhhhhcCCCcccc
Confidence            4455666566888888888 88899998776663  335678888999987543 221111111111             


Q ss_pred             ---------------HHHHHHhCCCceEEEeCCCCHHHHH---HHHHhcccCCEEEEEc
Q 017868          246 ---------------EKIQKAMGTGIDVSFDCAGLNKTMS---TALGATCAGGKVCLVG  286 (365)
Q Consensus       246 ---------------~~~~~~~~~~~d~vid~~g~~~~~~---~~~~~l~~~G~~~~~g  286 (365)
                                     .++.+. ...+|.||-++|+..++.   ..++.+.+.-+++.+.
T Consensus       152 ~~~~~~~~~g~~t~~~Ei~~q-~~~~D~vv~~~G~GG~~aG~~~~~~~~~~~~~ii~ve  209 (331)
T d1tdja1         152 PFDHPMVIAGQGTLALELLQQ-DAHLDRVFVPVGGGGLAAGVAVLIKQLMPQIKVIAVE  209 (331)
T ss_dssp             SSCCHHHHHHHHHHHHHHHHH-CTTCCEEEEECSSSHHHHHHHHHHHHHCTTCEEEEEE
T ss_pred             ccCChHHhhhhhhHHHHHHHh-cCCCCEEEEeCChhHHHHHHHHHHHHhCCCcEEEEec
Confidence                           111212 346899999888754444   4555566777777664

>d2iida1 c.3.1.2 (A:4-319,A:433-486) L-aminoacid oxidase {Malayan pit viper (Calloselasma rhodostoma) [TaxId: 8717]}

class: Alpha and beta proteins (a/b)
fold: FAD/NAD(P)-binding domain
superfamily: FAD/NAD(P)-binding domain
family: FAD-linked reductases, N-terminal domain
domain: L-aminoacid oxidase
species: Malayan pit viper (Calloselasma rhodostoma) [TaxId: 8717]

Probab=83.27  E-value=0.64  Score=38.35  Aligned_cols=37  Identities=22%  Similarity=0.431  Sum_probs=28.5

Q ss_pred             CCCCCEEEEEcCCHHHHHHHHHHHHHCCCCeEEEEeCCh
Q 017868          179 IGPETNVLIMGAGPIGLVTMLGAPRAFGAPRIVIVDVDD  217 (365)
Q Consensus       179 ~~~g~~vlI~G~g~~G~~ai~~l~~~~g~~~vi~v~~~~  217 (365)
                      .....+|+|+|+|..|+.++..|+ ..|. .|.+++.++
T Consensus        27 ~~~pkkV~IIGaG~aGLsaA~~L~-~~G~-~V~vlE~~~   63 (370)
T d2iida1          27 TSNPKHVVIVGAGMAGLSAAYVLA-GAGH-QVTVLEASE   63 (370)
T ss_dssp             CSSCCEEEEECCBHHHHHHHHHHH-HHTC-EEEEECSSS
T ss_pred             CCCCCeEEEECCCHHHHHHHHHHH-HCCC-CEEEEeCCC
Confidence            345579999999999998888455 4598 678887644

>d1gy8a_ c.2.1.2 (A:) Uridine diphosphogalactose-4-epimerase (UDP-galactose 4-epimerase) {Trypanosoma brucei [TaxId: 5691]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Tyrosine-dependent oxidoreductases
domain: Uridine diphosphogalactose-4-epimerase (UDP-galactose 4-epimerase)
species: Trypanosoma brucei [TaxId: 5691]

Probab=83.19  E-value=5.2  Score=33.55  Aligned_cols=32  Identities=34%  Similarity=0.430  Sum_probs=25.8

Q ss_pred             CCEEEEEcC-CHHHHHHHHHHHHHCCCCeEEEEe
Q 017868          182 ETNVLIMGA-GPIGLVTMLGAPRAFGAPRIVIVD  214 (365)
Q Consensus       182 g~~vlI~G~-g~~G~~ai~~l~~~~g~~~vi~v~  214 (365)
                      +-+|||+|+ |-+|..++..|++..|. .|++++
T Consensus         2 ~MKVLITG~tGfIGs~lv~~LL~~~~~-~V~~~D   34 (383)
T d1gy8a_           2 HMRVLVCGGAGYIGSHFVRALLRDTNH-SVVIVD   34 (383)
T ss_dssp             CCEEEEETTTSHHHHHHHHHHHHHCCC-EEEEEE
T ss_pred             cCEEEEeCCCcHHHHHHHHHHHHhCCC-EEEEEe
Confidence            568999987 99999888867777787 577775

>d1guza1 c.2.1.5 (A:1-142) Malate dehydrogenase {Chlorobium vibrioforme [TaxId: 1098]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: LDH N-terminal domain-like
domain: Malate dehydrogenase
species: Chlorobium vibrioforme [TaxId: 1098]

Probab=83.18  E-value=2.9  Score=29.87  Aligned_cols=38  Identities=24%  Similarity=0.338  Sum_probs=27.9

Q ss_pred             EEEEEcCCHHHHHHHHHHHHHCCCCeEEEEeCChhHHH
Q 017868          184 NVLIMGAGPIGLVTMLGAPRAFGAPRIVIVDVDDYRLS  221 (365)
Q Consensus       184 ~vlI~G~g~~G~~ai~~l~~~~g~~~vi~v~~~~~~~~  221 (365)
                      +|.|.|+|.+|...+..++...-+..++.+|.++++.+
T Consensus         2 KI~IIGaG~VG~~la~~l~~~~l~~el~L~Di~~~~~~   39 (142)
T d1guza1           2 KITVIGAGNVGATTAFRLAEKQLARELVLLDVVEGIPQ   39 (142)
T ss_dssp             EEEEECCSHHHHHHHHHHHHTTCCSEEEEECSSSSHHH
T ss_pred             EEEEECcCHHHHHHHHHHHhCCCCceEEEeccccccch
Confidence            57888999999988884544322567889998876644

>d1mv8a2 c.2.1.6 (A:1-202) GDP-mannose 6-dehydrogenase {Pseudomonas aeruginosa [TaxId: 287]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: 6-phosphogluconate dehydrogenase-like, N-terminal domain
domain: GDP-mannose 6-dehydrogenase
species: Pseudomonas aeruginosa [TaxId: 287]

Probab=83.12  E-value=0.97  Score=34.72  Aligned_cols=42  Identities=24%  Similarity=0.326  Sum_probs=33.7

Q ss_pred             EEEEEcCCHHHHHHHHHHHHHCCCCeEEEEeCChhHHHHHHHcC
Q 017868          184 NVLIMGAGPIGLVTMLGAPRAFGAPRIVIVDVDDYRLSVAKEIG  227 (365)
Q Consensus       184 ~vlI~G~g~~G~~ai~~l~~~~g~~~vi~v~~~~~~~~~~~~~g  227 (365)
                      +|.|+|+|-+|+.++..+| ..|. .|+++|.++++.+.+.+-.
T Consensus         2 kI~ViGlG~vGl~~a~~la-~~g~-~V~g~D~n~~~i~~ln~g~   43 (202)
T d1mv8a2           2 RISIFGLGYVGAVCAGCLS-ARGH-EVIGVDVSSTKIDLINQGK   43 (202)
T ss_dssp             EEEEECCSTTHHHHHHHHH-HTTC-EEEEECSCHHHHHHHHTTC
T ss_pred             EEEEECCCHhHHHHHHHHH-hCCC-cEEEEeCCHHHHHHhcccC
Confidence            5889999999998888455 5588 6899999999888776643

>d1rpna_ c.2.1.2 (A:) GDP-mannose 4,6-dehydratase {Pseudomonas aeruginosa [TaxId: 287]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Tyrosine-dependent oxidoreductases
domain: GDP-mannose 4,6-dehydratase
species: Pseudomonas aeruginosa [TaxId: 287]

Probab=83.03  E-value=0.76  Score=37.92  Aligned_cols=44  Identities=18%  Similarity=0.100  Sum_probs=30.3

Q ss_pred             CEEEEEcC-CHHHHHHHHHHHHHCCCCeEEEEeCChh--HHHHHHHcCC
Q 017868          183 TNVLIMGA-GPIGLVTMLGAPRAFGAPRIVIVDVDDY--RLSVAKEIGA  228 (365)
Q Consensus       183 ~~vlI~G~-g~~G~~ai~~l~~~~g~~~vi~v~~~~~--~~~~~~~~g~  228 (365)
                      .+|||+|+ |-+|..++..|+ ..|+ .|+++++...  ..+.++.++.
T Consensus         1 k~vLItG~tGfiG~~l~~~Ll-~~g~-~V~~~~r~~~~~~~~~l~~~~~   47 (321)
T d1rpna_           1 RSALVTGITGQDGAYLAKLLL-EKGY-RVHGLVARRSSDTRWRLRELGI   47 (321)
T ss_dssp             CEEEEETTTSHHHHHHHHHHH-HTTC-EEEEEECCCSSCCCHHHHHTTC
T ss_pred             CEEEEECCCCHHHHHHHHHHH-HCcC-EEEEEECCCCcccHHHHHHhcc
Confidence            48999987 999999999554 4598 5677765432  3345555554

>d1i0za1 c.2.1.5 (A:1-160) Lactate dehydrogenase {Human (Homo sapiens), heart isoform (H chain) [TaxId: 9606]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: LDH N-terminal domain-like
domain: Lactate dehydrogenase
species: Human (Homo sapiens), heart isoform (H chain) [TaxId: 9606]

Probab=83.02  E-value=3.6  Score=30.08  Aligned_cols=41  Identities=22%  Similarity=0.415  Sum_probs=31.1

Q ss_pred             CCCCEEEEEcCCHHHHHHHHHHHHHCCCCeEEEEeCChhHH
Q 017868          180 GPETNVLIMGAGPIGLVTMLGAPRAFGAPRIVIVDVDDYRL  220 (365)
Q Consensus       180 ~~g~~vlI~G~g~~G~~ai~~l~~~~g~~~vi~v~~~~~~~  220 (365)
                      .+..+|.|.|+|.+|..++..++..--+..++.+|.++++.
T Consensus        18 ~~~~KV~IIGaG~VG~~~A~~l~~~~l~~ElvLiD~~~~~a   58 (160)
T d1i0za1          18 VPNNKITVVGVGQVGMACAISILGKSLADELALVDVLEDKL   58 (160)
T ss_dssp             CCSSEEEEECCSHHHHHHHHHHHHTTCCSEEEEECSCHHHH
T ss_pred             CCCCeEEEECCCHHHHHHHHHHHhcCCCcEEEEEEeccchh
Confidence            45579999999999998888454443356799999887654

>d1c0pa1 c.4.1.2 (A:999-1193,A:1289-1361) D-aminoacid oxidase, N-terminal domain {Rhodotorula gracilis [TaxId: 5286]}

class: Alpha and beta proteins (a/b)
fold: Nucleotide-binding domain
superfamily: Nucleotide-binding domain
family: D-aminoacid oxidase, N-terminal domain
domain: D-aminoacid oxidase, N-terminal domain
species: Rhodotorula gracilis [TaxId: 5286]

Probab=83.01  E-value=0.89  Score=35.86  Aligned_cols=35  Identities=29%  Similarity=0.468  Sum_probs=27.3

Q ss_pred             CCCCEEEEEcCCHHHHHHHHHHHHHCCCCeEEEEeCC
Q 017868          180 GPETNVLIMGAGPIGLVTMLGAPRAFGAPRIVIVDVD  216 (365)
Q Consensus       180 ~~g~~vlI~G~g~~G~~ai~~l~~~~g~~~vi~v~~~  216 (365)
                      ++-.+|+|+|+|..|++++. .+...|. .|.++++.
T Consensus         4 ~~~~kVvVIGaGiaGl~~A~-~L~~~G~-~V~vier~   38 (268)
T d1c0pa1           4 HSQKRVVVLGSGVIGLSSAL-ILARKGY-SVHILARD   38 (268)
T ss_dssp             CCSCEEEEECCSHHHHHHHH-HHHHTTC-EEEEEESS
T ss_pred             CCCCcEEEECccHHHHHHHH-HHHHCCC-CEEEEeCC
Confidence            34568999999999999888 5556798 57777753

>d1pzga1 c.2.1.5 (A:14-163) Lactate dehydrogenase {Toxoplasma gondii [TaxId: 5811]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: LDH N-terminal domain-like
domain: Lactate dehydrogenase
species: Toxoplasma gondii [TaxId: 5811]

Probab=82.99  E-value=1.1  Score=32.79  Aligned_cols=40  Identities=20%  Similarity=0.129  Sum_probs=30.8

Q ss_pred             CCCCEEEEEcCCHHHHHHHHHHHHHCCCCeEEEEeCChhHH
Q 017868          180 GPETNVLIMGAGPIGLVTMLGAPRAFGAPRIVIVDVDDYRL  220 (365)
Q Consensus       180 ~~g~~vlI~G~g~~G~~ai~~l~~~~g~~~vi~v~~~~~~~  220 (365)
                      ++..+|.|.|+|.+|..++. ++...+...++.++.++++.
T Consensus         5 ~k~~KI~IIGaG~VG~~lA~-~l~~~~~~el~L~D~~~~~~   44 (154)
T d1pzga1           5 QRRKKVAMIGSGMIGGTMGY-LCALRELADVVLYDVVKGMP   44 (154)
T ss_dssp             SCCCEEEEECCSHHHHHHHH-HHHHHTCCEEEEECSSSSHH
T ss_pred             cCCCcEEEECCCHHHHHHHH-HHHhCCCceEEEEEeccccc
Confidence            45678999999999998887 44555766788888776553

>d1i36a2 c.2.1.6 (A:1-152) Conserved hypothetical protein MTH1747 {Archaeon Methanobacterium thermoautotrophicum [TaxId: 145262]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: 6-phosphogluconate dehydrogenase-like, N-terminal domain
domain: Conserved hypothetical protein MTH1747
species: Archaeon Methanobacterium thermoautotrophicum [TaxId: 145262]

Probab=82.95  E-value=2.3  Score=30.72  Aligned_cols=35  Identities=17%  Similarity=0.121  Sum_probs=25.0

Q ss_pred             EEEEEcCCHHHHHHHHHHHHHCCCCeEEEEeCChhHH
Q 017868          184 NVLIMGAGPIGLVTMLGAPRAFGAPRIVIVDVDDYRL  220 (365)
Q Consensus       184 ~vlI~G~g~~G~~ai~~l~~~~g~~~vi~v~~~~~~~  220 (365)
                      +|-|.|.|.+|+..+..+ ...|. .+++.++...+.
T Consensus         2 kIgiIG~G~mG~~ia~~l-~~~g~-~v~~~~~~~~~~   36 (152)
T d1i36a2           2 RVGFIGFGEVAQTLASRL-RSRGV-EVVTSLEGRSPS   36 (152)
T ss_dssp             EEEEESCSHHHHHHHHHH-HHTTC-EEEECCTTCCHH
T ss_pred             EEEEEcHHHHHHHHHHHH-HHCCC-eEEEEcCchhHH
Confidence            578889999999999945 45588 456665554443

>d1gtea3 c.3.1.1 (A:288-440) Dihydropyrimidine dehydrogenase, domain 3 {Pig (Sus scrofa) [TaxId: 9823]}

class: Alpha and beta proteins (a/b)
fold: FAD/NAD(P)-binding domain
superfamily: FAD/NAD(P)-binding domain
family: C-terminal domain of adrenodoxin reductase-like
domain: Dihydropyrimidine dehydrogenase, domain 3
species: Pig (Sus scrofa) [TaxId: 9823]

Probab=82.84  E-value=1  Score=32.94  Aligned_cols=36  Identities=22%  Similarity=0.319  Sum_probs=28.5

Q ss_pred             CCCCEEEEEcCCHHHHHHHHHHHHHCCCCeEEEEeCC
Q 017868          180 GPETNVLIMGAGPIGLVTMLGAPRAFGAPRIVIVDVD  216 (365)
Q Consensus       180 ~~g~~vlI~G~g~~G~~ai~~l~~~~g~~~vi~v~~~  216 (365)
                      ..+++|+|+|+|.+|.=++. .+.+.|++.|..+.+.
T Consensus        43 ~~~~kVvVIGGGdtA~D~A~-~a~r~GA~~V~vi~rr   78 (153)
T d1gtea3          43 SIRGAVIVLGAGDTAFDCAT-SALRCGARRVFLVFRK   78 (153)
T ss_dssp             CCCSEEEEECSSHHHHHHHH-HHHHTTCSEEEEECSS
T ss_pred             cCCCEEEEECCChhHHHHHH-HHHHcCCcceeEEEeC
Confidence            35678999999999998887 6677899877777554

>d1hwxa1 c.2.1.7 (A:209-501) Glutamate dehydrogenase {Cow (Bos taurus) [TaxId: 9913]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Aminoacid dehydrogenase-like, C-terminal domain
domain: Glutamate dehydrogenase
species: Cow (Bos taurus) [TaxId: 9913]

Probab=82.83  E-value=0.84  Score=37.29  Aligned_cols=32  Identities=31%  Similarity=0.492  Sum_probs=27.2

Q ss_pred             CCCEEEEEcCCHHHHHHHHHHHHHCCCCeEEEEe
Q 017868          181 PETNVLIMGAGPIGLVTMLGAPRAFGAPRIVIVD  214 (365)
Q Consensus       181 ~g~~vlI~G~g~~G~~ai~~l~~~~g~~~vi~v~  214 (365)
                      .|.+|+|.|-|.+|..+++ .+...|+ ++++++
T Consensus        35 ~gktvaIqGfGnVG~~~A~-~L~e~Ga-kvv~vs   66 (293)
T d1hwxa1          35 GDKTFAVQGFGNVGLHSMR-YLHRFGA-KCVAVG   66 (293)
T ss_dssp             TTCEEEEECCSHHHHHHHH-HHHHTTC-EEEEEE
T ss_pred             CCCEEEEECCCHHHHHHHH-HHHHCCC-EEEEEE
Confidence            6789999999999999999 6678899 566664

>d1gesa2 c.3.1.5 (A:147-262) Glutathione reductase {Escherichia coli [TaxId: 562]}

class: Alpha and beta proteins (a/b)
fold: FAD/NAD(P)-binding domain
superfamily: FAD/NAD(P)-binding domain
family: FAD/NAD-linked reductases, N-terminal and central domains
domain: Glutathione reductase
species: Escherichia coli [TaxId: 562]

Probab=82.82  E-value=1.1  Score=30.97  Aligned_cols=34  Identities=26%  Similarity=0.366  Sum_probs=27.1

Q ss_pred             CCEEEEEcCCHHHHHHHHHHHHHCCCCeEEEEeCCh
Q 017868          182 ETNVLIMGAGPIGLVTMLGAPRAFGAPRIVIVDVDD  217 (365)
Q Consensus       182 g~~vlI~G~g~~G~~ai~~l~~~~g~~~vi~v~~~~  217 (365)
                      .++++|.|+|.+|.=+++ .++.+|. .|..+.+.+
T Consensus        21 p~~vvIiGgG~ig~E~A~-~l~~~G~-~Vtlve~~~   54 (116)
T d1gesa2          21 PERVAVVGAGYIGVELGG-VINGLGA-KTHLFEMFD   54 (116)
T ss_dssp             CSEEEEECCSHHHHHHHH-HHHHTTC-EEEEECSSS
T ss_pred             CCEEEEECCChhhHHHHH-Hhhcccc-EEEEEeecc
Confidence            468999999999998888 6678899 566665544

>d1v59a2 c.3.1.5 (A:161-282) Dihydrolipoamide dehydrogenase {Baker's yeast (Saccharomyces cerevisiae) [TaxId: 4932]}

class: Alpha and beta proteins (a/b)
fold: FAD/NAD(P)-binding domain
superfamily: FAD/NAD(P)-binding domain
family: FAD/NAD-linked reductases, N-terminal and central domains
domain: Dihydrolipoamide dehydrogenase
species: Baker's yeast (Saccharomyces cerevisiae) [TaxId: 4932]

Probab=82.55  E-value=1.1  Score=31.27  Aligned_cols=34  Identities=24%  Similarity=0.398  Sum_probs=26.7

Q ss_pred             CCCEEEEEcCCHHHHHHHHHHHHHCCCCeEEEEeCC
Q 017868          181 PETNVLIMGAGPIGLVTMLGAPRAFGAPRIVIVDVD  216 (365)
Q Consensus       181 ~g~~vlI~G~g~~G~~ai~~l~~~~g~~~vi~v~~~  216 (365)
                      ..++++|.|+|.+|+=+++ ++..+|.+ |..+.+.
T Consensus        22 ~p~~~vIiG~G~ig~E~A~-~l~~lG~~-Vtii~~~   55 (122)
T d1v59a2          22 IPKRLTIIGGGIIGLEMGS-VYSRLGSK-VTVVEFQ   55 (122)
T ss_dssp             CCSEEEEECCSHHHHHHHH-HHHHTTCE-EEEECSS
T ss_pred             CCCeEEEECCCchHHHHHH-HHHhhCcc-eeEEEec
Confidence            3479999999999999999 66788995 5555443

>d1p3ha_ b.35.1.1 (A:) Chaperonin-10 (GroES) {Mycobacterium tuberculosis [TaxId: 1773]}

class: All beta proteins
fold: GroES-like
superfamily: GroES-like
family: GroES
domain: Chaperonin-10 (GroES)
species: Mycobacterium tuberculosis [TaxId: 1773]

Probab=82.46  E-value=0.97  Score=30.32  Aligned_cols=24  Identities=25%  Similarity=0.340  Sum_probs=19.2

Q ss_pred             ceEEEEEeCCCCC----------CCCCCCEEEEc
Q 017868           81 CAGVIEKVGSEVK----------TLVPGDRVALE  104 (365)
Q Consensus        81 ~~G~V~~vG~~v~----------~~~~Gd~V~~~  104 (365)
                      ..|+|+++|++..          .+++||+|+..
T Consensus        38 ~~G~VvavG~g~~~~~~~~~~~~~vk~GD~Vl~~   71 (99)
T d1p3ha_          38 QEGTVVAVGPGRWDEDGEKRIPLDVAEGDTVIYS   71 (99)
T ss_dssp             EEEEEEEECCCEECSSSSCEECCSCCTTCEEEEE
T ss_pred             eEEEEEEECCceEcCCCCEecCCeeecCCEEEEc
Confidence            3699999998642          47899999764

>d1q0qa2 c.2.1.3 (A:1-125,A:275-300) 1-deoxy-D-xylulose-5-phosphate reductoisomerase {Escherichia coli [TaxId: 562]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Glyceraldehyde-3-phosphate dehydrogenase-like, N-terminal domain
domain: 1-deoxy-D-xylulose-5-phosphate reductoisomerase
species: Escherichia coli [TaxId: 562]

Probab=82.43  E-value=6.8  Score=28.17  Aligned_cols=94  Identities=20%  Similarity=0.203  Sum_probs=56.6

Q ss_pred             EEEEEcC-CHHHHHHHHHHHHHCC--CCeEEEEeCChh--H-HHHHHHcCCCEEEeCCCCcccHHHHHHHHHH-------
Q 017868          184 NVLIMGA-GPIGLVTMLGAPRAFG--APRIVIVDVDDY--R-LSVAKEIGADNIVKVSTNLQDIAEEVEKIQK-------  250 (365)
Q Consensus       184 ~vlI~G~-g~~G~~ai~~l~~~~g--~~~vi~v~~~~~--~-~~~~~~~g~~~~~~~~~~~~~~~~~i~~~~~-------  250 (365)
                      +|.|.|+ |.+|.-++. +.+...  + +|++......  . .+.+.+|.+..+...++   +....++....       
T Consensus         3 ~I~IlGsTGSIG~~tL~-Vi~~~~d~f-~v~~Lsa~~N~~~L~~q~~~f~pk~v~i~d~---~~~~~l~~~l~~~~~~~~   77 (151)
T d1q0qa2           3 QLTILGSTGSIGCSTLD-VVRHNPEHF-RVVALVAGKNVTRMVEQCLEFSPRYAVMDDE---ASAKLLKTMLQQQGSRTE   77 (151)
T ss_dssp             EEEEETTTSHHHHHHHH-HHHHCTTTE-EEEEEEESSCHHHHHHHHHHHCCSEEEESSH---HHHHHHHHHHHHTTCCCE
T ss_pred             eEEEEcCCcHHHHHHHH-HHHhCCCCc-EEEEEEecCcHHHHHHHHHHHhhcccccccH---HHHHHHHHHhhhhccccc
Confidence            6889998 999999999 555543  4 4555544332  2 34667888888776432   22222222111       


Q ss_pred             -----------HhCCCceEEEeCCCCHHHHHHHHHhcccCCEE
Q 017868          251 -----------AMGTGIDVSFDCAGLNKTMSTALGATCAGGKV  282 (365)
Q Consensus       251 -----------~~~~~~d~vid~~g~~~~~~~~~~~l~~~G~~  282 (365)
                                 .....+|+|+.++.+...+.-.+.++..+=++
T Consensus        78 ~~~g~~~l~~~~~~~~~D~vi~AI~G~aGL~~t~~aik~gk~i  120 (151)
T d1q0qa2          78 VLSGQQAACDMAALEDVDQVMAAIVGAAGLLPTLAAIRAGKTI  120 (151)
T ss_dssp             EEESHHHHHHHHTCTTCCEEEECCSSGGGHHHHHHHHHTTCEE
T ss_pred             cccChHHHHHHhcCCCCCEEEEecCcccHHHHHHHHHhcCCeE
Confidence                       01246788888777666777777777755443

>d1susa1 c.66.1.1 (A:21-247) Caffeoyl-CoA O-methyltransferase {Alfalfa (Medicago sativa) [TaxId: 3879]}

class: Alpha and beta proteins (a/b)
fold: S-adenosyl-L-methionine-dependent methyltransferases
superfamily: S-adenosyl-L-methionine-dependent methyltransferases
family: COMT-like
domain: Caffeoyl-CoA O-methyltransferase
species: Alfalfa (Medicago sativa) [TaxId: 3879]

Probab=82.30  E-value=6.3  Score=30.56  Aligned_cols=103  Identities=14%  Similarity=0.146  Sum_probs=61.9

Q ss_pred             CCCCEEEEEcCCHHHHHHHHHHHHHCC-CCeEEEEeCChhHHHHHH----HcCCCEEEeCCCCcccHHHHHHHHHHH--h
Q 017868          180 GPETNVLIMGAGPIGLVTMLGAPRAFG-APRIVIVDVDDYRLSVAK----EIGADNIVKVSTNLQDIAEEVEKIQKA--M  252 (365)
Q Consensus       180 ~~g~~vlI~G~g~~G~~ai~~l~~~~g-~~~vi~v~~~~~~~~~~~----~~g~~~~~~~~~~~~~~~~~i~~~~~~--~  252 (365)
                      ....+||-.|.+ .|..++. +++.+. -.++++++.+++..+.++    +.|...-+.+..  .+..+.+.++...  .
T Consensus        58 ~~~k~iLEiGT~-~GyStl~-la~al~~~g~v~tie~~~~~~~~A~~~~~~~g~~~~i~~~~--g~a~~~L~~l~~~~~~  133 (227)
T d1susa1          58 INAKNTMEIGVY-TGYSLLA-TALAIPEDGKILAMDINKENYELGLPVIKKAGVDHKIDFRE--GPALPVLDEMIKDEKN  133 (227)
T ss_dssp             HTCCEEEEECCG-GGHHHHH-HHHHSCTTCEEEEEESCCHHHHHHHHHHHHTTCGGGEEEEE--SCHHHHHHHHHHCGGG
T ss_pred             cCCCcEEEecch-hhhhHHH-HHhhCCCCcEEEEEeccchhHHHHHHHHHHhccccceeeee--hHHHHHHHHHHhcccc
Confidence            455799999863 2555555 555543 237999999988766554    456543222211  2344445444321  1


Q ss_pred             CCCceEEEeCCCC---HHHHHHHHHhcccCCEEEEEc
Q 017868          253 GTGIDVSFDCAGL---NKTMSTALGATCAGGKVCLVG  286 (365)
Q Consensus       253 ~~~~d~vid~~g~---~~~~~~~~~~l~~~G~~~~~g  286 (365)
                      .+.+|+||--...   ...++.+++.|+++|.++.-.
T Consensus       134 ~~~fD~iFiDa~k~~y~~~~e~~~~ll~~gGiii~DN  170 (227)
T d1susa1         134 HGSYDFIFVDADKDNYLNYHKRLIDLVKVGGVIGYDN  170 (227)
T ss_dssp             TTCBSEEEECSCSTTHHHHHHHHHHHBCTTCCEEEET
T ss_pred             CCceeEEEeccchhhhHHHHHHHHhhcCCCcEEEEcc
Confidence            4579999753222   246668899999999988754

>d2bi7a1 c.4.1.3 (A:2-247,A:317-384) UDP-galactopyranose mutase, N-terminal domain {Klebsiella pneumoniae [TaxId: 573]}

class: Alpha and beta proteins (a/b)
fold: Nucleotide-binding domain
superfamily: Nucleotide-binding domain
family: UDP-galactopyranose mutase, N-terminal domain
domain: UDP-galactopyranose mutase, N-terminal domain
species: Klebsiella pneumoniae [TaxId: 573]

Probab=81.92  E-value=0.87  Score=37.77  Aligned_cols=35  Identities=31%  Similarity=0.401  Sum_probs=27.5

Q ss_pred             CCEEEEEcCCHHHHHHHHHHHHHCCCCeEEEEeCChh
Q 017868          182 ETNVLIMGAGPIGLVTMLGAPRAFGAPRIVIVDVDDY  218 (365)
Q Consensus       182 g~~vlI~G~g~~G~~ai~~l~~~~g~~~vi~v~~~~~  218 (365)
                      ..+|+|+|||..|+.++..|+ ..|. .|.+++.++.
T Consensus         2 ~KKI~IIGaG~sGL~aA~~L~-k~G~-~V~viEk~~~   36 (314)
T d2bi7a1           2 SKKILIVGAGFSGAVIGRQLA-EKGH-QVHIIDQRDH   36 (314)
T ss_dssp             CCEEEEECCSHHHHHHHHHHH-TTTC-EEEEEESSSS
T ss_pred             CCEEEEECCcHHHHHHHHHHH-hCCC-CEEEEECCCC
Confidence            578999999999999999454 5588 6788876553

>d1tw3a2 c.66.1.12 (A:99-351) Carminomycin 4-O-methyltransferase {Streptomyces peucetius [TaxId: 1950]}

class: Alpha and beta proteins (a/b)
fold: S-adenosyl-L-methionine-dependent methyltransferases
superfamily: S-adenosyl-L-methionine-dependent methyltransferases
family: Plant O-methyltransferase, C-terminal domain
domain: Carminomycin 4-O-methyltransferase
species: Streptomyces peucetius [TaxId: 1950]

Probab=81.86  E-value=2.4  Score=33.56  Aligned_cols=102  Identities=17%  Similarity=0.148  Sum_probs=58.8

Q ss_pred             HhcCCCCCCEEEEEcCCHHHHHHHHHHHHHCCCCeEEEEeCChh---HHHHHHHcCCCEEEeCCCCcccHHHHHHHHHHH
Q 017868          175 RRANIGPETNVLIMGAGPIGLVTMLGAPRAFGAPRIVIVDVDDY---RLSVAKEIGADNIVKVSTNLQDIAEEVEKIQKA  251 (365)
Q Consensus       175 ~~~~~~~g~~vlI~G~g~~G~~ai~~l~~~~g~~~vi~v~~~~~---~~~~~~~~g~~~~~~~~~~~~~~~~~i~~~~~~  251 (365)
                      +...+....+||=+|+|. |..++. +++...--.+++++.++.   ..+.+.+.+....+.+..  .|+-+       .
T Consensus        74 ~~~d~~~~~~VLDvGcG~-G~~~~~-la~~~p~~~~~~~D~~~~~~~a~~~~~~~~~~~rv~~~~--~D~~~-------~  142 (253)
T d1tw3a2          74 AAYDWTNVRHVLDVGGGK-GGFAAA-IARRAPHVSATVLEMAGTVDTARSYLKDEGLSDRVDVVE--GDFFE-------P  142 (253)
T ss_dssp             HHSCCTTCSEEEEETCTT-SHHHHH-HHHHCTTCEEEEEECTTHHHHHHHHHHHTTCTTTEEEEE--CCTTS-------C
T ss_pred             hhcCCccCCEEEEeCCCC-CHHHHH-HHHhcceeEEEEccCHHHHHHHHHHHHHhhcccchhhcc--ccchh-------h
Confidence            445667778999888864 777777 666654436777876431   122334444321111101  11100       0


Q ss_pred             hCCCceEEEeCCC-----CH---HHHHHHHHhcccCCEEEEEcc
Q 017868          252 MGTGIDVSFDCAG-----LN---KTMSTALGATCAGGKVCLVGM  287 (365)
Q Consensus       252 ~~~~~d~vid~~g-----~~---~~~~~~~~~l~~~G~~~~~g~  287 (365)
                      ...++|+|+-..-     .+   ..+..+.++|+|+|++++...
T Consensus       143 ~~~~~D~v~~~~vlh~~~d~~~~~~L~~~~~~LkPGG~l~i~e~  186 (253)
T d1tw3a2         143 LPRKADAIILSFVLLNWPDHDAVRILTRCAEALEPGGRILIHER  186 (253)
T ss_dssp             CSSCEEEEEEESCGGGSCHHHHHHHHHHHHHTEEEEEEEEEEEC
T ss_pred             cccchhheeeccccccCCchhhHHHHHHHHHhcCCCcEEEEEec
Confidence            1457999885321     12   346788999999999998753

>d1fcda1 c.3.1.5 (A:1-114,A:256-327) Flavocytochrome c sulfide dehydrogenase, FCSD, flavin-binding subunit {Purple phototrophic bacterium (Chromatium vinosum) [TaxId: 1049]}

class: Alpha and beta proteins (a/b)
fold: FAD/NAD(P)-binding domain
superfamily: FAD/NAD(P)-binding domain
family: FAD/NAD-linked reductases, N-terminal and central domains
domain: Flavocytochrome c sulfide dehydrogenase, FCSD, flavin-binding subunit
species: Purple phototrophic bacterium (Chromatium vinosum) [TaxId: 1049]

Probab=81.74  E-value=1.2  Score=32.81  Aligned_cols=36  Identities=11%  Similarity=0.281  Sum_probs=26.3

Q ss_pred             CCCEEEEEcCCHHHHHHHHHHHHHCCCC-eEEEEeCCh
Q 017868          181 PETNVLIMGAGPIGLVTMLGAPRAFGAP-RIVIVDVDD  217 (365)
Q Consensus       181 ~g~~vlI~G~g~~G~~ai~~l~~~~g~~-~vi~v~~~~  217 (365)
                      .|++|+|.|+|..|..++. .++..+.+ .|..++.++
T Consensus         1 ~gkrivIvGgG~~G~e~A~-~l~~~~~~~~Vtlie~~~   37 (186)
T d1fcda1           1 AGRKVVVVGGGTGGATAAK-YIKLADPSIEVTLIEPNT   37 (186)
T ss_dssp             CCCEEEEECCSHHHHHHHH-HHHHHCTTSEEEEECSCS
T ss_pred             CCCcEEEECccHHHHHHHH-HHHHcCCCCcEEEEECCC
Confidence            4789999999999998888 44555643 466665544

>d1q1ra2 c.3.1.5 (A:115-247) Putidaredoxin reductase {Pseudomonas putida [TaxId: 303]}

class: Alpha and beta proteins (a/b)
fold: FAD/NAD(P)-binding domain
superfamily: FAD/NAD(P)-binding domain
family: FAD/NAD-linked reductases, N-terminal and central domains
domain: Putidaredoxin reductase
species: Pseudomonas putida [TaxId: 303]

Probab=81.65  E-value=1.4  Score=31.13  Aligned_cols=38  Identities=16%  Similarity=0.364  Sum_probs=29.4

Q ss_pred             CCCCCCEEEEEcCCHHHHHHHHHHHHHCCCCeEEEEeCCh
Q 017868          178 NIGPETNVLIMGAGPIGLVTMLGAPRAFGAPRIVIVDVDD  217 (365)
Q Consensus       178 ~~~~g~~vlI~G~g~~G~~ai~~l~~~~g~~~vi~v~~~~  217 (365)
                      .++++.+++|.|+|.+|.=++. .++..|. .|..+++.+
T Consensus        31 ~~~~~k~v~VIGgG~iG~E~A~-~l~~~g~-~Vtvie~~~   68 (133)
T d1q1ra2          31 QLIADNRLVVIGGGYIGLEVAA-TAIKANM-HVTLLDTAA   68 (133)
T ss_dssp             TCCTTCEEEEECCSHHHHHHHH-HHHHTTC-EEEEECSSS
T ss_pred             hhccCCEEEEECCchHHHHHHH-HHHhhCc-ceeeeeecc
Confidence            3567789999999999998888 6667798 466665544

>d1h6va2 c.3.1.5 (A:171-292) Mammalian thioredoxin reductase {Rat (Rattus norvegicus) [TaxId: 10116]}

class: Alpha and beta proteins (a/b)
fold: FAD/NAD(P)-binding domain
superfamily: FAD/NAD(P)-binding domain
family: FAD/NAD-linked reductases, N-terminal and central domains
domain: Mammalian thioredoxin reductase
species: Rat (Rattus norvegicus) [TaxId: 10116]

Probab=81.44  E-value=1  Score=31.38  Aligned_cols=31  Identities=19%  Similarity=0.169  Sum_probs=25.8

Q ss_pred             CCCEEEEEcCCHHHHHHHHHHHHHCCCCeEEE
Q 017868          181 PETNVLIMGAGPIGLVTMLGAPRAFGAPRIVI  212 (365)
Q Consensus       181 ~g~~vlI~G~g~~G~~ai~~l~~~~g~~~vi~  212 (365)
                      ..++++|.|+|.+|+=.++ .++.+|.++.+.
T Consensus        19 ~P~~vvIIGgG~iG~E~A~-~l~~lG~~Vtii   49 (122)
T d1h6va2          19 CPGKTLVVGASYVALECAG-FLAGIGLDVTVM   49 (122)
T ss_dssp             CCCSEEEECCSHHHHHHHH-HHHHTTCCEEEE
T ss_pred             CCCeEEEECCCccHHHHHH-HHhhcCCeEEEE
Confidence            4468999999999999999 778889975555

>d1ej0a_ c.66.1.2 (A:) RNA methyltransferase FtsJ {Escherichia coli [TaxId: 562]}

class: Alpha and beta proteins (a/b)
fold: S-adenosyl-L-methionine-dependent methyltransferases
superfamily: S-adenosyl-L-methionine-dependent methyltransferases
family: RNA methyltransferase FtsJ
domain: RNA methyltransferase FtsJ
species: Escherichia coli [TaxId: 562]

Probab=81.32  E-value=7.8  Score=28.75  Aligned_cols=96  Identities=15%  Similarity=0.196  Sum_probs=53.4

Q ss_pred             CCCCCEEEEEcC--CHHHHHHHHHHHHHCCCCeEEEEeCChhHHHHHHHcCCCEEEeCCCCcccHHHHHHHHHHHhCCCc
Q 017868          179 IGPETNVLIMGA--GPIGLVTMLGAPRAFGAPRIVIVDVDDYRLSVAKEIGADNIVKVSTNLQDIAEEVEKIQKAMGTGI  256 (365)
Q Consensus       179 ~~~g~~vlI~G~--g~~G~~ai~~l~~~~g~~~vi~v~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~i~~~~~~~~~~~  256 (365)
                      ++++.+||=+|+  |+--+++.+ .  ......+++++..+.+     .......+.-+-........+..  .....++
T Consensus        20 ~k~~~~vlDLg~aPGgw~q~~~~-~--~~~~~~v~~vDl~~~~-----~i~~~~~~~~d~~~~~~~~~~~~--~~~~~~~   89 (180)
T d1ej0a_          20 FKPGMTVVDLGAAPGGWSQYVVT-Q--IGGKGRIIACDLLPMD-----PIVGVDFLQGDFRDELVMKALLE--RVGDSKV   89 (180)
T ss_dssp             CCTTCEEEEESCTTCHHHHHHHH-H--HCTTCEEEEEESSCCC-----CCTTEEEEESCTTSHHHHHHHHH--HHTTCCE
T ss_pred             cCCCCeEEEEeccCCcceEEEEe-e--ccccceEEEeeccccc-----ccCCceEeecccccchhhhhhhh--hccCcce
Confidence            678888877875  665555555 2  2334578888865532     12222223222222222222222  2236789


Q ss_pred             eEEEe-----CCCCH------------HHHHHHHHhcccCCEEEE
Q 017868          257 DVSFD-----CAGLN------------KTMSTALGATCAGGKVCL  284 (365)
Q Consensus       257 d~vid-----~~g~~------------~~~~~~~~~l~~~G~~~~  284 (365)
                      |+|+.     ++|..            ..+..+.+.|+++|.++.
T Consensus        90 DlVlSD~ap~~sg~~~~d~~~~~~L~~~~l~~a~~~Lk~gG~fV~  134 (180)
T d1ej0a_          90 QVVMSDMAPNMSGTPAVDIPRAMYLVELALEMCRDVLAPGGSFVV  134 (180)
T ss_dssp             EEEEECCCCCCCSCHHHHHHHHHHHHHHHHHHHHHHEEEEEEEEE
T ss_pred             eEEEecccchhcccchhHHHHHHHHHHHHHHhhhhccCCCCcEEE
Confidence            99986     44432            233457788999999885

>d1x7da_ c.2.1.13 (A:) Ornithine cyclodeaminase {Pseudomonas putida [TaxId: 303]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Ornithine cyclodeaminase-like
domain: Ornithine cyclodeaminase
species: Pseudomonas putida [TaxId: 303]

Probab=81.16  E-value=6.7  Score=32.52  Aligned_cols=105  Identities=17%  Similarity=0.197  Sum_probs=66.8

Q ss_pred             HHHhcCCCCCCEEEEEcCCHHHHHHHHHHHHHCCCCeEEEEeCChhHHH-HHHHcCC---CEEEeCCCCcccHHHHHHHH
Q 017868          173 ACRRANIGPETNVLIMGAGPIGLVTMLGAPRAFGAPRIVIVDVDDYRLS-VAKEIGA---DNIVKVSTNLQDIAEEVEKI  248 (365)
Q Consensus       173 ~~~~~~~~~g~~vlI~G~g~~G~~ai~~l~~~~g~~~vi~v~~~~~~~~-~~~~~g~---~~~~~~~~~~~~~~~~i~~~  248 (365)
                      +.+...-+...++.|.|+|..+.+-++.++..++.+.|.+.++++++.+ +++.+..   ..+...    .+..+.+   
T Consensus       119 aa~~LA~~da~~l~iiG~G~QA~~~~~a~~~v~~i~~V~v~~r~~~~~~~~~~~l~~~~g~~v~~~----~s~~eav---  191 (340)
T d1x7da_         119 AAQALARPNARKMALIGNGAQSEFQALAFHKHLGIEEIVAYDTDPLATAKLIANLKEYSGLTIRRA----SSVAEAV---  191 (340)
T ss_dssp             HHHHHSCTTCCEEEEECCSTTHHHHHHHHHHHSCCCEEEEECSSHHHHHHHHHHHTTCTTCEEEEC----SSHHHHH---
T ss_pred             HHHHhhccCCceEEEEcccHHHHHHHHHHhhhcceeeeEEEecChHHHHHHHHhhhhccCCCceec----CCHHHHH---
Confidence            3343323455788999999999888886778889999999999877654 5555432   122222    2333332   


Q ss_pred             HHHhCCCceEEEeCCCCHHHH-HHHHHhcccCCEEEEEccCC
Q 017868          249 QKAMGTGIDVSFDCAGLNKTM-STALGATCAGGKVCLVGMGH  289 (365)
Q Consensus       249 ~~~~~~~~d~vid~~g~~~~~-~~~~~~l~~~G~~~~~g~~~  289 (365)
                           .+.|+|+-|+.++... -.....++++-++..+|...
T Consensus       192 -----~~ADIi~t~Tas~s~~Pv~~~~~l~pG~hI~aiGs~~  228 (340)
T d1x7da_         192 -----KGVDIITTVTADKAYATIITPDMLEPGMHLNAVGGDC  228 (340)
T ss_dssp             -----TTCSEEEECCCCSSEEEEECGGGCCTTCEEEECSCCB
T ss_pred             -----hcCCceeeccccCCCCcccchhhcCCCCEEeecccch
Confidence                 5789999877543100 01225788998888887543

>d1ygya1 c.2.1.4 (A:99-282) Phosphoglycerate dehydrogenase {Mycobacterium tuberculosis [TaxId: 1773]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Formate/glycerate dehydrogenases, NAD-domain
domain: Phosphoglycerate dehydrogenase
species: Mycobacterium tuberculosis [TaxId: 1773]

Probab=81.12  E-value=1.6  Score=32.97  Aligned_cols=88  Identities=20%  Similarity=0.170  Sum_probs=55.0

Q ss_pred             CCCEEEEEcCCHHHHHHHHHHHHHCCCCeEEEEeCChhHHHHHHHcCCCEEEeCCCCcccHHHHHHHHHHHhCCCceEEE
Q 017868          181 PETNVLIMGAGPIGLVTMLGAPRAFGAPRIVIVDVDDYRLSVAKEIGADNIVKVSTNLQDIAEEVEKIQKAMGTGIDVSF  260 (365)
Q Consensus       181 ~g~~vlI~G~g~~G~~ai~~l~~~~g~~~vi~v~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~i~~~~~~~~~~~d~vi  260 (365)
                      .|.++.|.|.|.+|+.+++ +++.+|. +|++.++...+... ...+...        .++.+.+        ...|+|+
T Consensus        43 ~~k~vgiiG~G~IG~~va~-~~~~fg~-~v~~~d~~~~~~~~-~~~~~~~--------~~l~ell--------~~sDiv~  103 (184)
T d1ygya1          43 FGKTVGVVGLGRIGQLVAQ-RIAAFGA-YVVAYDPYVSPARA-AQLGIEL--------LSLDDLL--------ARADFIS  103 (184)
T ss_dssp             TTCEEEEECCSHHHHHHHH-HHHTTTC-EEEEECTTSCHHHH-HHHTCEE--------CCHHHHH--------HHCSEEE
T ss_pred             cceeeeeccccchhHHHHH-Hhhhccc-eEEeecCCCChhHH-hhcCcee--------ccHHHHH--------hhCCEEE
Confidence            5788999999999999999 8899999 68888765544332 2333321        1222222        2467877


Q ss_pred             eCCCC-HHH---H-HHHHHhcccCCEEEEEcc
Q 017868          261 DCAGL-NKT---M-STALGATCAGGKVCLVGM  287 (365)
Q Consensus       261 d~~g~-~~~---~-~~~~~~l~~~G~~~~~g~  287 (365)
                      -+... +++   + ...++.|+++..++.++.
T Consensus       104 ~~~Plt~~T~~lin~~~l~~mk~~a~lIN~sR  135 (184)
T d1ygya1         104 VHLPKTPETAGLIDKEALAKTKPGVIIVNAAR  135 (184)
T ss_dssp             ECCCCSTTTTTCBCHHHHTTSCTTEEEEECSC
T ss_pred             EcCCCCchhhhhhhHHHHhhhCCCceEEEecc
Confidence            65442 111   1 146667777777766654

>d1gado1 c.2.1.3 (O:0-148,O:313-330) Glyceraldehyde-3-phosphate dehydrogenase (GAPDH) {Escherichia coli [TaxId: 562]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Glyceraldehyde-3-phosphate dehydrogenase-like, N-terminal domain
domain: Glyceraldehyde-3-phosphate dehydrogenase (GAPDH)
species: Escherichia coli [TaxId: 562]

Probab=80.80  E-value=3.9  Score=30.09  Aligned_cols=97  Identities=23%  Similarity=0.195  Sum_probs=54.6

Q ss_pred             EEEEEcCCHHHHHHHHHHHHHCCCCeEEEEeCCh--hHHHHHHHcCCCE--------------------EEeCCCCcccH
Q 017868          184 NVLIMGAGPIGLVTMLGAPRAFGAPRIVIVDVDD--YRLSVAKEIGADN--------------------IVKVSTNLQDI  241 (365)
Q Consensus       184 ~vlI~G~g~~G~~ai~~l~~~~g~~~vi~v~~~~--~~~~~~~~~g~~~--------------------~~~~~~~~~~~  241 (365)
                      +|.|.|-|-+|..+..++...... .++++....  +....+-++...+                    +..+...+++ 
T Consensus         3 kigINGFGRIGR~v~R~~~~~~~i-~ivaINd~~~~~~~ayLl~yDSvhG~~~~~v~~~~~~l~ing~~I~i~~~~~p~-   80 (166)
T d1gado1           3 KVGINGFGRIGRIVFRAAQKRSDI-EIVAINDLLDADYMAYMLKYDSTHGRFDGTVEVKDGHLIVNGKKIRVTAERDPA-   80 (166)
T ss_dssp             EEEEECCSHHHHHHHHHHHTCSSE-EEEEEECSSCHHHHHHHHHCCTTTCSCSSCEEEETTEEEETTEEEEEECCSSGG-
T ss_pred             EEEEECCcHHHHHHHHHHhhCCCe-EEEEEeCCCCHHHHhhhheecCCCCCcCCeEEEeCCEEEECCEEEEEEeCCChH-
Confidence            577889999999999945444345 455553222  2333333332111                    1111111111 


Q ss_pred             HHHHHHHHHHhCCCceEEEeCCCCHHHHHHHHHhcccCCEEEEEccC
Q 017868          242 AEEVEKIQKAMGTGIDVSFDCAGLNKTMSTALGATCAGGKVCLVGMG  288 (365)
Q Consensus       242 ~~~i~~~~~~~~~~~d~vid~~g~~~~~~~~~~~l~~~G~~~~~g~~  288 (365)
                       + + .|.   ..++|+||||+|.-...+.+..+|..+.+-++++-+
T Consensus        81 -~-i-~W~---~~gvDiViEcTG~f~t~~~~~~hl~~gakkViiSaP  121 (166)
T d1gado1          81 -N-L-KWD---EVGVDVVAEATGLFLTDETARKHITAGAKKVVMTGP  121 (166)
T ss_dssp             -G-G-CHH---HHTCSEEEECSSSCCSHHHHTHHHHTTCSEEEESSC
T ss_pred             -H-C-Ccc---ccCCCEEEEccccccCHHHHHHHhcCCCceEEeecc
Confidence             0 0 011   247999999999655556777788888777777543

>d1ez4a1 c.2.1.5 (A:16-162) Lactate dehydrogenase {Lactobacillus pentosus [TaxId: 1589]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: LDH N-terminal domain-like
domain: Lactate dehydrogenase
species: Lactobacillus pentosus [TaxId: 1589]

Probab=80.76  E-value=2  Score=31.03  Aligned_cols=40  Identities=28%  Similarity=0.345  Sum_probs=30.6

Q ss_pred             CCCEEEEEcCCHHHHHHHHHHHHHCCCCeEEEEeCChhHH
Q 017868          181 PETNVLIMGAGPIGLVTMLGAPRAFGAPRIVIVDVDDYRL  220 (365)
Q Consensus       181 ~g~~vlI~G~g~~G~~ai~~l~~~~g~~~vi~v~~~~~~~  220 (365)
                      ...+|.|.|+|.+|...+..++..--+..++.+|.++++.
T Consensus         4 ~~~KI~IIGaG~VG~~~A~~l~~~~~~~elvL~D~~~~~~   43 (146)
T d1ez4a1           4 NHQKVVLVGDGAVGSSYAFAMAQQGIAEEFVIVDVVKDRT   43 (146)
T ss_dssp             TBCEEEEECCSHHHHHHHHHHHHHTCCSEEEEECSSHHHH
T ss_pred             CCCEEEEECCCHHHHHHHHHHHhcCCCcEEEEeecccchh
Confidence            3468999999999998888565553356799999888654

>d1lvla2 c.3.1.5 (A:151-265) Dihydrolipoamide dehydrogenase {Pseudomonas putida [TaxId: 303]}

class: Alpha and beta proteins (a/b)
fold: FAD/NAD(P)-binding domain
superfamily: FAD/NAD(P)-binding domain
family: FAD/NAD-linked reductases, N-terminal and central domains
domain: Dihydrolipoamide dehydrogenase
species: Pseudomonas putida [TaxId: 303]

Probab=80.57  E-value=1.2  Score=30.61  Aligned_cols=34  Identities=29%  Similarity=0.574  Sum_probs=26.5

Q ss_pred             CCEEEEEcCCHHHHHHHHHHHHHCCCCeEEEEeCCh
Q 017868          182 ETNVLIMGAGPIGLVTMLGAPRAFGAPRIVIVDVDD  217 (365)
Q Consensus       182 g~~vlI~G~g~~G~~ai~~l~~~~g~~~vi~v~~~~  217 (365)
                      .++++|.|+|.+|.=+++ .++.+|.+ |..+.+.+
T Consensus        21 p~~vvIiGgG~~G~E~A~-~l~~~g~~-Vtlve~~~   54 (115)
T d1lvla2          21 PQHLVVVGGGYIGLELGI-AYRKLGAQ-VSVVEARE   54 (115)
T ss_dssp             CSEEEEECCSHHHHHHHH-HHHHHTCE-EEEECSSS
T ss_pred             CCeEEEECCCHHHHHHHH-HHhhcccc-eEEEeeec
Confidence            479999999999998888 66677984 66665543

>d2dw4a2 c.3.1.2 (A:274-654,A:764-831) Lysine-specific histone demethylase 1, LSD1 {Human (Homo sapiens) [TaxId: 9606]}

class: Alpha and beta proteins (a/b)
fold: FAD/NAD(P)-binding domain
superfamily: FAD/NAD(P)-binding domain
family: FAD-linked reductases, N-terminal domain
domain: Lysine-specific histone demethylase 1, LSD1
species: Human (Homo sapiens) [TaxId: 9606]

Probab=80.52  E-value=1  Score=37.23  Aligned_cols=36  Identities=25%  Similarity=0.531  Sum_probs=27.6

Q ss_pred             CCCCEEEEEcCCHHHHHHHHHHHHHCCCCeEEEEeCCh
Q 017868          180 GPETNVLIMGAGPIGLVTMLGAPRAFGAPRIVIVDVDD  217 (365)
Q Consensus       180 ~~g~~vlI~G~g~~G~~ai~~l~~~~g~~~vi~v~~~~  217 (365)
                      ++..+|+|+|+|..|+.++. .+...|. .|.+.+.++
T Consensus         3 ~~~~kViVIGaG~aGL~aA~-~L~~~G~-~V~VlEa~~   38 (449)
T d2dw4a2           3 KKTGKVIIIGSGVSGLAAAR-QLQSFGM-DVTLLEARD   38 (449)
T ss_dssp             SCCCEEEEECCBHHHHHHHH-HHHHTTC-EEEEECSSS
T ss_pred             CCCCcEEEECCCHHHHHHHH-HHHhCCC-CEEEEeCCC
Confidence            45568999999999999998 4456698 577776543

>d1obfo1 c.2.1.3 (O:1-152,O:315-335) Glyceraldehyde-3-phosphate dehydrogenase (GAPDH) {Achromobacter xylosoxidans [TaxId: 85698]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Glyceraldehyde-3-phosphate dehydrogenase-like, N-terminal domain
domain: Glyceraldehyde-3-phosphate dehydrogenase (GAPDH)
species: Achromobacter xylosoxidans [TaxId: 85698]

Probab=80.30  E-value=4.2  Score=30.15  Aligned_cols=35  Identities=23%  Similarity=0.393  Sum_probs=27.2

Q ss_pred             CCCceEEEeCCCCHHHHHHHHHhcccCCEEEEEcc
Q 017868          253 GTGIDVSFDCAGLNKTMSTALGATCAGGKVCLVGM  287 (365)
Q Consensus       253 ~~~~d~vid~~g~~~~~~~~~~~l~~~G~~~~~g~  287 (365)
                      ..++|+|+||+|.-.....+..+|..+.+-++++-
T Consensus        89 ~~gvDiViEcTG~f~~~~~a~~hl~~GakkViiSA  123 (173)
T d1obfo1          89 ALKVDVVLECTGFFTTKEKAGAHIKGGAKKVIISA  123 (173)
T ss_dssp             TTTCSEEEECSSSCCSHHHHHHHHHHTCSEEEESS
T ss_pred             ccccceEEEecccccCHHHHHHHhccCCcceEEec
Confidence            35899999999975555677788888877777754

>d1o58a_ c.79.1.1 (A:) O-acetylserine sulfhydrylase (Cysteine synthase) {Thermotoga maritima [TaxId: 2336]}

class: Alpha and beta proteins (a/b)
fold: Tryptophan synthase beta subunit-like PLP-dependent enzymes
superfamily: Tryptophan synthase beta subunit-like PLP-dependent enzymes
family: Tryptophan synthase beta subunit-like PLP-dependent enzymes
domain: O-acetylserine sulfhydrylase (Cysteine synthase)
species: Thermotoga maritima [TaxId: 2336]

Probab=80.26  E-value=13  Score=29.84  Aligned_cols=46  Identities=20%  Similarity=0.255  Sum_probs=35.3

Q ss_pred             EEEEcCCHHHHHHHHHHHHHCCCCeEEEEeC--ChhHHHHHHHcCCCEE
Q 017868          185 VLIMGAGPIGLVTMLGAPRAFGAPRIVIVDV--DDYRLSVAKEIGADNI  231 (365)
Q Consensus       185 vlI~G~g~~G~~ai~~l~~~~g~~~vi~v~~--~~~~~~~~~~~g~~~~  231 (365)
                      |+...+|..|.+++. .++.+|.+.++.+..  ++.|.+.++.+|+.-+
T Consensus        58 vv~~SsGN~g~a~A~-~a~~~g~~~~i~~p~~~~~~k~~~~~~~GA~V~  105 (293)
T d1o58a_          58 IVEPTSGNMGIAIAM-IGAKRGHRVILTMPETMSVERRKVLKMLGAELV  105 (293)
T ss_dssp             EEEECSSHHHHHHHH-HHHHHTCCEEEEEETTSCHHHHHHHHHTTCEEE
T ss_pred             eEEecCcchhhHHHH-hhhhccceeEeeccccccHHHeeccccCCcEEE
Confidence            333456999998888 999999987777753  4678889999998654

>d3grsa2 c.3.1.5 (A:166-290) Glutathione reductase {Human (Homo sapiens) [TaxId: 9606]}

class: Alpha and beta proteins (a/b)
fold: FAD/NAD(P)-binding domain
superfamily: FAD/NAD(P)-binding domain
family: FAD/NAD-linked reductases, N-terminal and central domains
domain: Glutathione reductase
species: Human (Homo sapiens) [TaxId: 9606]

Probab=80.14  E-value=1.5  Score=30.67  Aligned_cols=34  Identities=24%  Similarity=0.262  Sum_probs=26.8

Q ss_pred             CCEEEEEcCCHHHHHHHHHHHHHCCCCeEEEEeCCh
Q 017868          182 ETNVLIMGAGPIGLVTMLGAPRAFGAPRIVIVDVDD  217 (365)
Q Consensus       182 g~~vlI~G~g~~G~~ai~~l~~~~g~~~vi~v~~~~  217 (365)
                      .++++|.|+|.+|+=++. .++.+|.+ |..+.+++
T Consensus        22 pk~vvIvGgG~iG~E~A~-~l~~~G~~-Vtlv~~~~   55 (125)
T d3grsa2          22 PGRSVIVGAGYIAVEMAG-ILSALGSK-TSLMIRHD   55 (125)
T ss_dssp             CSEEEEECCSHHHHHHHH-HHHHTTCE-EEEECSSS
T ss_pred             CCEEEEEcCCccHHHHHH-HHhcCCcE-EEEEeecc
Confidence            368999999999998888 66788995 56665543

>d1ojta2 c.3.1.5 (A:276-400) Dihydrolipoamide dehydrogenase {Neisseria meningitidis [TaxId: 487]}

class: Alpha and beta proteins (a/b)
fold: FAD/NAD(P)-binding domain
superfamily: FAD/NAD(P)-binding domain
family: FAD/NAD-linked reductases, N-terminal and central domains
domain: Dihydrolipoamide dehydrogenase
species: Neisseria meningitidis [TaxId: 487]

Probab=80.06  E-value=1.3  Score=31.10  Aligned_cols=34  Identities=26%  Similarity=0.434  Sum_probs=26.8

Q ss_pred             CCCCEEEEEcCCHHHHHHHHHHHHHCCCCeEEEEeC
Q 017868          180 GPETNVLIMGAGPIGLVTMLGAPRAFGAPRIVIVDV  215 (365)
Q Consensus       180 ~~g~~vlI~G~g~~G~~ai~~l~~~~g~~~vi~v~~  215 (365)
                      +..++++|.|+|.+|+=+++ ..+.+|.+ |..+..
T Consensus        24 ~~p~~vvIiGgG~IG~E~A~-~~~~~G~~-Vtive~   57 (125)
T d1ojta2          24 EVPGKLLIIGGGIIGLEMGT-VYSTLGSR-LDVVEM   57 (125)
T ss_dssp             CCCSEEEEESCSHHHHHHHH-HHHHHTCE-EEEECS
T ss_pred             ccCCeEEEECCCHHHHHHHH-HhhcCCCE-EEEEEe
Confidence            44589999999999998888 66778995 555544