Citrus Sinensis ID: 017934

Local Sequence Feature Prediction

Prediction and (Method)Result
Residue Number Marker
Protein Sequence ?
Secondary Structure (PSIPRED) ?
Secondary Structure Prediction (SSPRO) ?
Coil and Loop (DISEMBL) ?
Flexible Loop (DISEMBL) ?
Low Complexity Region (SEG) ?
Disordered region (IsUnstruct) ?
Disordered Region (DISOPRED) ?
Disordered Region (DISEMBL) ?
Disordered Region (DISPRO) ?
Transmembrane Helix (TMHMM) ?
Transmembrane Helix (HMMTOP) ?
Transmembrane Helix (MEMSAT) ?
TM Helix, Signal Peptide (MEMSAT_SVM) ?
TM Helix, Signal Peptide (Phobius) ?
Signal Peptide (SignalP HMM Mode) ?
Signal Peptide (SignalP NN Mode) ?
Coiled Coils (COILS) ?
Positional Conservation ?
 
--------10--------20--------30--------40--------50--------60--------70--------80--------90-------100-------110-------120-------130-------140-------150-------160-------170-------180-------190-------200-------210-------220-------230-------240-------250-------260-------270-------280-------290-------300-------310-------320-------330-------340-------350-------360---
MNCLQSWPEPIVRVQALSESGIKSIPERYIKPSLQRPNSVKHGDRDFDDSQINIPLIDLQSIYSNDESVRNETLSCISNACRDWAFFQVVNHGVSPELMKQTREMWREFFNLPLELKQEYANSPTTYEGYGSRLGVEKGAKLDWSDYFFLHFMPHSLRNPNKWPSLPPSCRELVSEYGENLVKLCGVLMKVLSINLGLQEDQFQNAFGGEEIGACLRVNFYPKCPQPDLTLGLSPHSDPGGMTLLLPDENVAGLQVRRGDNWITVKPVPNAFIVNIGDQIQVLSNAIYKSVEHRVIVNSEKDRVSLAFFYNPKSDLLIEPMKEFVTRNRPALYPPMTYDEYRLYIRTKGPCGKAQVESLTSSP
cccccccccccccHHHHHHccccccccccccccccccccccccccccccccccccEEEccccccccHHHHHHHHHHHHHHHHHccEEEEEcccccHHHHHHHHHHHHHHHcccHHHHHHHHccccccEEEccccccccccccccEEEEEEEEEccccccccccccccccHHHHHHHHHHHHHHHHHHHHHHHHHHccccHHHHHHHHccccccEEEEEEcccccccccccccccccccccccEEEEEcccccccEEEEccEEEEcccccccEEEEEccEEEEEEcccccccccEEEccccccEEEEEEEEccccccEEEccccccccccccccccccHHHHHHHHHHcccccccccccccccc
cccHccccccHHHHHHHHHcccccccHHcEcccccccccccccccccccccccccEEEccccccccHHHHHHHHHHHHHHHHHccEEEEEcccccHHHHHHHHHHHHHHHcccHHHHHHHEcEHHHEcEEEccccccccccccccEEEEEEEEcHHHccHHHcccccccHHHHHHHHHHHHHHHHHHHHHHHHHHccccccHHHHHccHHHccEEEEEEccccccccccEcccccccccccEEEEEcccccccEEEEEccEEEEcccccccEEEEEcHHHHHHcccccccccEEEcccccccEEEEEEEEEccccccEcccHHHcccccccccccccHHHHHHHHHHHccccccHHHHHcccc
mnclqswpepiVRVQALSesgiksiperyikpslqrpnsvkhgdrdfddsqiniplidlqsiysndesVRNETLSCISNACRDWAFFQVVnhgvspelMKQTREMWREFFNLPLELKqeyanspttyegygsrlgvekgakldwsdyfflhfmphslrnpnkwpslppsCRELVSEYGENLVKLCGVLMKVLSInlglqedqfqnafggeeigaclrvnfypkcpqpdltlglsphsdpggmtlllpdenvaglqvrrgdnwitvkpvpnafivNIGDQIQVLSNAIYKSVEHRVIVNSEKDRVSLAffynpksdlliepmkefvtrnrpalyppmtydeYRLYirtkgpcgkaqvesltssp
mnclqswpepIVRVQALsesgiksiperyikpslqrpnsVKHGDRDFDDSQINIPLIDLQSIYSNDESVRNETLSCISNACRDWAFFQVVNHGVSPELMKQTREMWREFFNLPLELKQEYANSPTTYEGYGSRLGVEKGAKLDWSDYFFLHFMPHSLRNPNKWPSLPPSCRELVSEYGENLVKLCGVLMKVLSINLGLQEDQFQNAFGGEEIGACLRVNFYPKCPQPDLTLGLSPHSDPGGMTLLLPDENVAGLQVRRGDNWITVKPVPNAFIVNIGDQIQVLSNAIYKSVEHRVivnsekdrvSLAFFynpksdlliepmkefvtrnrpalyppMTYDEYRLYIRTKGPCGKAqvesltssp
MNCLQSWPEPIVRVQALSESGIKSIPERYIKPSLQRPNSVKHGDRDFDDSQINIPLIDLQSIYSNDESVRNETLSCISNACRDWAFFQVVNHGVSPELMKQTREMWREFFNLPLELKQEYANSPTTYEGYGSRLGVEKGAKLDWSDYFFLHFMPHSLRNPNKWPSLPPSCRELVSEYGENLVKLCGVLMKVLSINLGLQEDQFQNAFGGEEIGACLRVNFYPKCPQPDLTLGLSPHSDPGGMTLLLPDENVAGLQVRRGDNWITVKPVPNAFIVNIGDQIQVLSNAIYKSVEHRVIVNSEKDRVSLAFFYNPKSDLLIEPMKEFVTRNRPALYPPMTYDEYRLYIRTKGPCGKAQVESLTSSP
**************************************************QINIPLIDLQSIYSNDESVRNETLSCISNACRDWAFFQVVNHGVSPELMKQTREMWREFFNLPLELKQEYANSPTTYEGYGSRLGVEKGAKLDWSDYFFLHFMPHSLRNPNKWPSLPPSCRELVSEYGENLVKLCGVLMKVLSINLGLQEDQFQNAFGGEEIGACLRVNFYPKCPQPDLTLGL*******GMTLLLPDENVAGLQVRRGDNWITVKPVPNAFIVNIGDQIQVLSNAIYKSVEHRVIVNSEKDRVSLAFFYNPKSDLLIEPMKEFVTRNRPALYPPMTYDEYRLYIRTKGPC************
**C*QSWPEPIVRVQALSESGIKSIPERYIKPSLQR************DSQINIPLIDLQSIYSNDESVRNETLSCISNACRDWAFFQVVNHGVSPELMKQTREMWREFFNLPLELKQEYANSPTTYEGYGSRLGVEKGAKLDWSDYFFLHFMPHSLRNPNKWPSLPPSCRELVSEYGENLVKLCGVLMKVLSINLGLQEDQFQNAFGGEEIGACLRVNFYPKCPQPDLTLGLSPHSDPGGMTLLLPDENVAGLQVRRGDNWITVKPVPNAFIVNIGDQIQVLSNAIYKSVEHRVIVNSEKDRVSLAFFYNPKSDLLIEPMKEFVTRNRPALYPPMTYDEYRLYIRTKGPCGKAQVESLTSS*
MNCLQSWPEPIVRVQALSESGIKSIPERYIKPSLQRPNSVKHGDRDFDDSQINIPLIDLQSIYSNDESVRNETLSCISNACRDWAFFQVVNHGVSPELMKQTREMWREFFNLPLELKQEYANSPTTYEGYGSRLGVEKGAKLDWSDYFFLHFMPHSLRNPNKWPSLPPSCRELVSEYGENLVKLCGVLMKVLSINLGLQEDQFQNAFGGEEIGACLRVNFYPKCPQPDLTLGLSPHSDPGGMTLLLPDENVAGLQVRRGDNWITVKPVPNAFIVNIGDQIQVLSNAIYKSVEHRVIVNSEKDRVSLAFFYNPKSDLLIEPMKEFVTRNRPALYPPMTYDEYRLYIRTKGP*************
**CLQSWPEPIVRVQALSESGIKSIPERYIKPSLQRPNSVKHG***FDDSQINIPLIDLQSIYSNDESVRNETLSCISNACRDWAFFQVVNHGVSPELMKQTREMWREFFNLPLELKQEYANSPTTYEGYGSRLGVEKGAKLDWSDYFFLHFMPHSLRNPNKWPSLPPSCRELVSEYGENLVKLCGVLMKVLSINLGLQEDQFQNAFGGEEIGACLRVNFYPKCPQPDLTLGLSPHSDPGGMTLLLPDENVAGLQVRRGDNWITVKPVPNAFIVNIGDQIQVLSNAIYKSVEHRVIVNSEKDRVSLAFFYNPKSDLLIEPMKEFVTRNRPALYPPMTYDEYRLYIRTKGPCGKAQVES*T***
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MNCLQSWPEPIVRVQALSESGIKSIPERYIKPSLQRPNSVKHGDRDFDDSQINIPLIDLQSIYSNDESVRNETLSCISNACRDWAFFQVVNHGVSPELMKQTREMWREFFNLPLELKQEYANSPTTYEGYGSRLGVEKGAKLDWSDYFFLHFMPHSLRNPNKWPSLPPSCRELVSEYGENLVKLCGVLMKVLSINLGLQEDQFQNAFGGEEIGACLRVNFYPKCPQPDLTLGLSPHSDPGGMTLLLPDENVAGLQVRRGDNWITVKPVPNAFIVNIGDQIQVLSNAIYKSVEHRVIVNSEKDRVSLAFFYNPKSDLLIEPMKEFVTRNRPALYPPMTYDEYRLYIRTKGPCGKAQVESLTSSP
no confident homologs detected

Close Homologs for Annotation Transfer

Close Homologs in SWISS-PROT Database Detected by BLAST ?

Original result of BLAST against SWISS-PROT Database

ID ?Alignment graph ?Length ? Definition ? RBH(Q2H) ? RBH(H2Q) ? Q cover ? H cover ? Identity ? E-value ?
Query363 2.2.26 [Sep-21-2011]
P51091357 Leucoanthocyanidin dioxyg N/A no 0.903 0.918 0.390 9e-69
Q96323356 Leucoanthocyanidin dioxyg no no 0.903 0.921 0.385 7e-66
Q39224358 Protein SRG1 OS=Arabidops no no 0.931 0.944 0.356 1e-65
O04274362 Leucoanthocyanidin dioxyg N/A no 0.933 0.936 0.364 1e-62
D4N501364 Probable 2-oxoglutarate/F N/A no 0.933 0.931 0.360 2e-62
P51092430 Leucoanthocyanidin dioxyg N/A no 0.909 0.767 0.369 8e-62
D4N502360 Codeine O-demethylase OS= N/A no 0.881 0.888 0.376 2e-61
Q7XZQ6337 Flavonol synthase/flavano N/A no 0.881 0.949 0.375 1e-60
D4N500364 Thebaine 6-O-demethylase N/A no 0.939 0.936 0.353 5e-60
Q9ZWQ9335 Flavonol synthase/flavano N/A no 0.876 0.949 0.363 2e-57
>sp|P51091|LDOX_MALDO Leucoanthocyanidin dioxygenase OS=Malus domestica GN=ANS PE=2 SV=1 Back     alignment and function desciption
 Score =  261 bits (666), Expect = 9e-69,   Method: Compositional matrix adjust.
 Identities = 130/333 (39%), Positives = 205/333 (61%), Gaps = 5/333 (1%)

Query: 13  RVQALSESGIKSIPERYIKPSLQRPNSVKHGDRDFDDSQINIPLIDLQSIYSNDESVRNE 72
           RV+ L+ SGI +IP+ YI+P  +  N     +++ ++    +P IDL+ I S++E VR +
Sbjct: 10  RVETLAGSGISTIPKEYIRPKDELVNIGDIFEQEKNNEGPQVPTIDLKEIESDNEKVRAK 69

Query: 73  TLSCISNACRDWAFFQVVNHGVSPELMKQTREMWREFFNLPLELKQEYANSPTT--YEGY 130
               +  A  DW    +VNHG+S ELM + R+  + FF+LP+E K++YAN   +   +GY
Sbjct: 70  CREKLKKAAVDWGVMHLVNHGISDELMDKVRKAGKAFFDLPIEQKEKYANDQASGKIQGY 129

Query: 131 GSRLGVEKGAKLDWSDYFFLHFMPHSLRNPNKWPSLPPSCRELVSEYGENLVKLCGVLMK 190
           GS+L      +L+W DYFF    P   R+ + WP  P    E  +EY + L +L   ++K
Sbjct: 130 GSKLANNASGQLEWEDYFFHCVYPEDKRDLSIWPQTPADYIEATAEYAKQLRELATKVLK 189

Query: 191 VLSINLGLQEDQFQNAFGG-EEIGACLRVNFYPKCPQPDLTLGLSPHSDPGGMTLLLPDE 249
           VLS+ LGL E + +   GG EE+   +++N+YPKCPQP+L LG+  H+D   +T +L + 
Sbjct: 190 VLSLGLGLDEGRLEKEVGGLEELLLQMKINYYPKCPQPELALGVEAHTDVSALTFILHN- 248

Query: 250 NVAGLQVRRGDNWITVKPVPNAFIVNIGDQIQVLSNAIYKSVEHRVIVNSEKDRVSLAFF 309
            V GLQ+     W+T K VPN+ +++IGD +++LSN  YKS+ HR +VN EK R+S A F
Sbjct: 249 MVPGLQLFYEGKWVTAKCVPNSIVMHIGDTLEILSNGKYKSILHRGMVNKEKVRISWAVF 308

Query: 310 YN-PKSDLLIEPMKEFVTRNRPALYPPMTYDEY 341
              PK  ++++P+ E V+ + PA++PP T+ E+
Sbjct: 309 CEPPKEKIILKPLPETVSEDEPAMFPPRTFAEH 341
Oxidation of leucoanthocyanidins into anthocyanidins.
Malus domestica (taxid: 3750)
EC: 1EC: .EC: 1EC: 4EC: .EC: 1EC: 1EC: .EC: 1EC: 9
>sp|Q96323|LDOX_ARATH Leucoanthocyanidin dioxygenase OS=Arabidopsis thaliana GN=LDOX PE=1 SV=1 Back     alignment and function description
>sp|Q39224|SRG1_ARATH Protein SRG1 OS=Arabidopsis thaliana GN=SRG1 PE=2 SV=1 Back     alignment and function description
>sp|O04274|LDOX_PERFR Leucoanthocyanidin dioxygenase OS=Perilla frutescens GN=ANS PE=2 SV=1 Back     alignment and function description
>sp|D4N501|DIOX2_PAPSO Probable 2-oxoglutarate/Fe(II)-dependent dioxygenase OS=Papaver somniferum GN=DIOX2 PE=2 SV=1 Back     alignment and function description
>sp|P51092|LDOX_PETHY Leucoanthocyanidin dioxygenase OS=Petunia hybrida GN=ANT17 PE=2 SV=1 Back     alignment and function description
>sp|D4N502|DIOX3_PAPSO Codeine O-demethylase OS=Papaver somniferum GN=CODM PE=1 SV=1 Back     alignment and function description
>sp|Q7XZQ6|FLS_PETCR Flavonol synthase/flavanone 3-hydroxylase OS=Petroselinum crispum GN=FLS PE=1 SV=1 Back     alignment and function description
>sp|D4N500|DIOX1_PAPSO Thebaine 6-O-demethylase OS=Papaver somniferum GN=T6ODM PE=1 SV=1 Back     alignment and function description
>sp|Q9ZWQ9|FLS_CITUN Flavonol synthase/flavanone 3-hydroxylase OS=Citrus unshiu GN=FLS PE=1 SV=1 Back     alignment and function description

Close Homologs in the Non-Redundant Database Detected by BLAST ?

Original result of BLAST against Nonredundant Database

GI ?Alignment Graph ?Length ? Definition ? Q cover ? H cover ? Identity ? E-value ?
Query363
255585926362 Leucoanthocyanidin dioxygenase, putative 0.994 0.997 0.765 1e-164
224140423367 predicted protein [Populus trichocarpa] 0.983 0.972 0.768 1e-164
224087760362 predicted protein [Populus trichocarpa] 0.977 0.980 0.729 1e-157
224091010361 predicted protein [Populus trichocarpa] 0.986 0.991 0.744 1e-157
358349115 474 Leucoanthocyanidin dioxygenase [Medicago 0.983 0.753 0.713 1e-156
357468779371 Leucoanthocyanidin dioxygenase [Medicago 0.983 0.962 0.713 1e-156
356503301373 PREDICTED: leucoanthocyanidin dioxygenas 0.994 0.967 0.693 1e-154
356521024382 PREDICTED: leucoanthocyanidin dioxygenas 0.991 0.942 0.692 1e-153
224109308358 predicted protein [Populus trichocarpa] 0.980 0.994 0.698 1e-148
224101153358 predicted protein [Populus trichocarpa] 0.980 0.994 0.686 1e-148
>gi|255585926|ref|XP_002533635.1| Leucoanthocyanidin dioxygenase, putative [Ricinus communis] gi|223526473|gb|EEF28746.1| Leucoanthocyanidin dioxygenase, putative [Ricinus communis] Back     alignment and taxonomy information
 Score =  585 bits (1508), Expect = e-164,   Method: Compositional matrix adjust.
 Identities = 278/363 (76%), Positives = 315/363 (86%), Gaps = 2/363 (0%)

Query: 1   MNCLQSWPEPIVRVQALSESGIKSIPERYIKPSLQRPNSVKHGDRDFDDSQINIPLIDLQ 60
           MNCL SWPEP+VRVQ+LS+SGI+ IP RYIKP   RP    + D  F  S+INIP+IDLQ
Sbjct: 1   MNCLHSWPEPVVRVQSLSDSGIRQIPHRYIKPPSHRPMINSNSDASFH-SEINIPVIDLQ 59

Query: 61  SIYSNDESVRNETLSCISNACRDWAFFQVVNHGVSPELMKQTREMWREFFNLPLELKQEY 120
           ++ S+D+++R +TL+ IS ACRDW FFQV+NHGV+PEL++  R++WREFFNLPLE KQEY
Sbjct: 60  NVLSSDQALRQDTLTRISCACRDWGFFQVINHGVNPELLRGIRQVWREFFNLPLEKKQEY 119

Query: 121 ANSPTTYEGYGSRLGVEKGAKLDWSDYFFLHFMPHSLRNPNKWPSLPPSCRELVSEYGEN 180
           ANSP TYEGYGSRLGVE+G  LDWSDYFFLH+MP SLRN  KWP++P SCRELV+EYG  
Sbjct: 120 ANSPATYEGYGSRLGVEQGVTLDWSDYFFLHYMPASLRNHQKWPAIPASCRELVAEYGSE 179

Query: 181 LVKLCGVLMKVLSINLGLQEDQFQNAFGGEE-IGACLRVNFYPKCPQPDLTLGLSPHSDP 239
           +VKL G LM+V S NLGL+ED+ QN FGG++ IGACLRVNFYPKCPQPDLTLGLSPHSDP
Sbjct: 180 VVKLGGRLMRVFSTNLGLEEDRLQNTFGGDDNIGACLRVNFYPKCPQPDLTLGLSPHSDP 239

Query: 240 GGMTLLLPDENVAGLQVRRGDNWITVKPVPNAFIVNIGDQIQVLSNAIYKSVEHRVIVNS 299
           GGMT+LLPDENVAGLQVRRGDNWITVKPVPNAFI+NIGDQIQVLSNAIYKSVEHRVIVNS
Sbjct: 240 GGMTILLPDENVAGLQVRRGDNWITVKPVPNAFIINIGDQIQVLSNAIYKSVEHRVIVNS 299

Query: 300 EKDRVSLAFFYNPKSDLLIEPMKEFVTRNRPALYPPMTYDEYRLYIRTKGPCGKAQVESL 359
           +KDRVSLAFFYNP+SDLLIEP KE VT  RPALYP  T+DEYRLYIRTKGPCGK QVESL
Sbjct: 300 DKDRVSLAFFYNPESDLLIEPCKELVTMERPALYPAKTFDEYRLYIRTKGPCGKQQVESL 359

Query: 360 TSS 362
             S
Sbjct: 360 KCS 362

Source: Ricinus communis

Species: Ricinus communis

Genus: Ricinus

Family: Euphorbiaceae

Order: Malpighiales

Class:

Phylum: Streptophyta

Superkingdom: Eukaryota
>gi|224140423|ref|XP_002323582.1| predicted protein [Populus trichocarpa] gi|222868212|gb|EEF05343.1| predicted protein [Populus trichocarpa] Back     alignment and taxonomy information
>gi|224087760|ref|XP_002308223.1| predicted protein [Populus trichocarpa] gi|222854199|gb|EEE91746.1| predicted protein [Populus trichocarpa] Back     alignment and taxonomy information
>gi|224091010|ref|XP_002309144.1| predicted protein [Populus trichocarpa] gi|222855120|gb|EEE92667.1| predicted protein [Populus trichocarpa] Back     alignment and taxonomy information
>gi|358349115|ref|XP_003638585.1| Leucoanthocyanidin dioxygenase [Medicago truncatula] gi|355504520|gb|AES85723.1| Leucoanthocyanidin dioxygenase [Medicago truncatula] Back     alignment and taxonomy information
>gi|357468779|ref|XP_003604674.1| Leucoanthocyanidin dioxygenase [Medicago truncatula] gi|355505729|gb|AES86871.1| Leucoanthocyanidin dioxygenase [Medicago truncatula] Back     alignment and taxonomy information
>gi|356503301|ref|XP_003520449.1| PREDICTED: leucoanthocyanidin dioxygenase-like [Glycine max] Back     alignment and taxonomy information
>gi|356521024|ref|XP_003529158.1| PREDICTED: leucoanthocyanidin dioxygenase-like [Glycine max] Back     alignment and taxonomy information
>gi|224109308|ref|XP_002315155.1| predicted protein [Populus trichocarpa] gi|222864195|gb|EEF01326.1| predicted protein [Populus trichocarpa] Back     alignment and taxonomy information
>gi|224101153|ref|XP_002312162.1| predicted protein [Populus trichocarpa] gi|222851982|gb|EEE89529.1| predicted protein [Populus trichocarpa] Back     alignment and taxonomy information

Prediction of Gene Ontology (GO) Terms

Close Homologs with Gene Ontology terms Detected by BLAST ?

Original result of BLAST against Gene Ontology (AMIGO)

ID ? Alignment graph ? Length ? Definition ? Q cover ? H cover ? Identity ? E-value ?
Query363
TAIR|locus:2169697371 AT5G05600 [Arabidopsis thalian 0.961 0.940 0.657 2.7e-132
TAIR|locus:2082058363 JRG21 "jasmonate-regulated gen 0.988 0.988 0.641 2.6e-127
TAIR|locus:2042942353 AT2G38240 [Arabidopsis thalian 0.947 0.974 0.615 5.2e-120
TAIR|locus:2089428364 LBO1 "LATERAL BRANCHING OXIDOR 0.909 0.906 0.410 7.4e-66
TAIR|locus:2127218356 LDOX "leucoanthocyanidin dioxy 0.903 0.921 0.385 2e-63
TAIR|locus:2020407358 SRG1 "senescence-related gene 0.947 0.960 0.364 3e-62
TAIR|locus:2122669356 AT4G25300 [Arabidopsis thalian 0.931 0.949 0.349 4.3e-61
TAIR|locus:2122679353 AT4G25310 [Arabidopsis thalian 0.922 0.949 0.361 9e-61
TAIR|locus:2020422361 AT1G17010 [Arabidopsis thalian 0.950 0.955 0.339 1.7e-57
TAIR|locus:2202980356 AT1G78550 [Arabidopsis thalian 0.942 0.960 0.322 2e-56
TAIR|locus:2169697 AT5G05600 [Arabidopsis thaliana (taxid:3702)] Back     alignment and assigned GO terms
 Score = 1297 (461.6 bits), Expect = 2.7e-132, P = 2.7e-132
 Identities = 234/356 (65%), Positives = 291/356 (81%)

Query:     4 LQSWPEPIVRVQALSESGIKSIPERYIKPSLQRPNSVKHGDRDFDDSQINIPLIDLQSIY 63
             +  WPEPIVRVQ+L+ES + S+P+RYIKP+  RP + +        +  NIP+IDL+ ++
Sbjct:    17 MDEWPEPIVRVQSLAESNLSSLPDRYIKPASLRPTTTEDAP-----TATNIPIIDLEGLF 71

Query:    64 SNDESVRNETLSC-ISNACRDWAFFQVVNHGVSPELMKQTREMWREFFNLPLELKQEYAN 122
             S +E + ++ +   IS ACR W FFQVVNHGV PELM   RE WREFF++P+  K+ Y+N
Sbjct:    72 S-EEGLSDDVIMARISEACRGWGFFQVVNHGVKPELMDAARENWREFFHMPVNAKETYSN 130

Query:   123 SPTTYEGYGSRLGVEKGAKLDWSDYFFLHFMPHSLRNPNKWPSLPPSCRELVSEYGENLV 182
             SP TYEGYGSRLGVEKGA LDWSDY+FLH +PH L++ NKWPS PP+ RE++ EYGE LV
Sbjct:   131 SPRTYEGYGSRLGVEKGASLDWSDYYFLHLLPHHLKDFNKWPSFPPTIREVIDEYGEELV 190

Query:   183 KLCGVLMKVLSINLGLQEDQFQNAFGGEEIGACLRVNFYPKCPQPDLTLGLSPHSDPGGM 242
             KL G +M+VLS NLGL+ED+FQ AFGGE IGACLRVN+YPKCP+P+L LGLSPHSDPGGM
Sbjct:   191 KLSGRIMRVLSTNLGLKEDKFQEAFGGENIGACLRVNYYPKCPRPELALGLSPHSDPGGM 250

Query:   243 TLLLPDENVAGLQVRRGDNWITVKPVPNAFIVNIGDQIQVLSNAIYKSVEHRVIVNSEKD 302
             T+LLPD+ V GLQVR+ D WITVKP P+AFIVNIGDQIQ+LSN+ YKSVEHRVIVNS+K+
Sbjct:   251 TILLPDDQVFGLQVRKDDTWITVKPHPHAFIVNIGDQIQILSNSTYKSVEHRVIVNSDKE 310

Query:   303 RVSLAFFYNPKSDLLIEPMKEFVTRNRPALYPPMTYDEYRLYIRTKGPCGKAQVES 358
             RVSLAFFYNPKSD+ I+P++E V+ + P LYPPMT+D+YRL+IRT+GP GK+ VES
Sbjct:   311 RVSLAFFYNPKSDIPIQPLQELVSTHNPPLYPPMTFDQYRLFIRTQGPQGKSHVES 366
GO:0005506 "iron ion binding" evidence=IEA
GO:0005737 "cytoplasm" evidence=ISM
GO:0016491 "oxidoreductase activity" evidence=IEA
GO:0016706 "oxidoreductase activity, acting on paired donors, with incorporation or reduction of molecular oxygen, 2-oxoglutarate as one donor, and incorporation of one atom each of oxygen into both donors" evidence=IEA
GO:0055114 "oxidation-reduction process" evidence=IEA
GO:0080167 "response to karrikin" evidence=IEP
GO:0009611 "response to wounding" evidence=RCA
GO:0009620 "response to fungus" evidence=RCA
GO:0009695 "jasmonic acid biosynthetic process" evidence=RCA
GO:0009753 "response to jasmonic acid stimulus" evidence=RCA
GO:0009867 "jasmonic acid mediated signaling pathway" evidence=RCA
TAIR|locus:2082058 JRG21 "jasmonate-regulated gene 21" [Arabidopsis thaliana (taxid:3702)] Back     alignment and assigned GO terms
TAIR|locus:2042942 AT2G38240 [Arabidopsis thaliana (taxid:3702)] Back     alignment and assigned GO terms
TAIR|locus:2089428 LBO1 "LATERAL BRANCHING OXIDOREDUCTASE 1" [Arabidopsis thaliana (taxid:3702)] Back     alignment and assigned GO terms
TAIR|locus:2127218 LDOX "leucoanthocyanidin dioxygenase" [Arabidopsis thaliana (taxid:3702)] Back     alignment and assigned GO terms
TAIR|locus:2020407 SRG1 "senescence-related gene 1" [Arabidopsis thaliana (taxid:3702)] Back     alignment and assigned GO terms
TAIR|locus:2122669 AT4G25300 [Arabidopsis thaliana (taxid:3702)] Back     alignment and assigned GO terms
TAIR|locus:2122679 AT4G25310 [Arabidopsis thaliana (taxid:3702)] Back     alignment and assigned GO terms
TAIR|locus:2020422 AT1G17010 [Arabidopsis thaliana (taxid:3702)] Back     alignment and assigned GO terms
TAIR|locus:2202980 AT1G78550 [Arabidopsis thaliana (taxid:3702)] Back     alignment and assigned GO terms

Prediction of Enzyme Commission (EC) Number

EC Number Prediction by Annotation Transfer from SWISS-PROT Entries ?

Original result of BLAST against SWISS-PROT

No confident hit for EC number transfering in SWISSPROT detected by BLAST

EC Number Prediction by Ezypred Server ?

Original result from Ezypred Server

Fail to connect to Ezypred Server

EC Number Prediction by EFICAz Software ?

Prediction LevelEC numberConfidence of Prediction
3rd Layer1.14.110.766
4th Layer1.14.11.9LOW CONFIDENCE prediction!
3rd Layer1.14.11.13LOW CONFIDENCE prediction!
4th Layer1.14.11.4LOW CONFIDENCE prediction!

Prediction of Functionally Associated Proteins

Functionally Associated Proteins Detected by STRING ?

Original result from the STRING server

Your Input:
estExt_fgenesh4_pm.C_LG_XVI0427
oxidoreductase, 2OG-Fe(II) oxygenase family protein (EC-1.14.11.9) (367 aa)
(Populus trichocarpa)
Predicted Functional Partners:
F3H1
flavonoid 3'-hydroxylase (EC-1.14.13.21) (521 aa)
      • 0.510

Conserved Domains and Related Protein Families

Conserved Domains Detected by RPS-BLAST ?

Original result of RPS-BLAST against CDD database part I

ID ?Alignment Graph ?Length ? Definition ? E-value ?
Query363
PLN02393362 PLN02393, PLN02393, leucoanthocyanidin dioxygenase 0.0
PLN03178360 PLN03178, PLN03178, leucoanthocyanidin dioxygenase 1e-105
PLN02758361 PLN02758, PLN02758, oxidoreductase, 2OG-Fe(II) oxy 1e-104
PLN02639337 PLN02639, PLN02639, oxidoreductase, 2OG-Fe(II) oxy 3e-87
PLN02216357 PLN02216, PLN02216, protein SRG1 2e-84
PLN02704335 PLN02704, PLN02704, flavonol synthase 5e-82
PLN02947374 PLN02947, PLN02947, oxidoreductase 3e-78
PLN02912348 PLN02912, PLN02912, oxidoreductase, 2OG-Fe(II) oxy 1e-74
PLN00417348 PLN00417, PLN00417, oxidoreductase, 2OG-Fe(II) oxy 6e-70
PLN02276361 PLN02276, PLN02276, gibberellin 20-oxidase 2e-66
PLN02904357 PLN02904, PLN02904, oxidoreductase 4e-65
PLN02515358 PLN02515, PLN02515, naringenin,2-oxoglutarate 3-di 4e-65
PLN03001262 PLN03001, PLN03001, oxidoreductase, 2OG-Fe(II) oxy 3e-63
PLN02254358 PLN02254, PLN02254, gibberellin 3-beta-dioxygenase 4e-63
PLN02750345 PLN02750, PLN02750, oxidoreductase, 2OG-Fe(II) oxy 1e-62
PLN02299321 PLN02299, PLN02299, 1-aminocyclopropane-1-carboxyl 2e-62
PLN02403303 PLN02403, PLN02403, aminocyclopropanecarboxylate o 7e-59
PLN02997325 PLN02997, PLN02997, flavonol synthase 1e-55
COG3491322 COG3491, PcbC, Isopenicillin N synthase and relate 3e-54
PLN02485329 PLN02485, PLN02485, oxidoreductase 3e-50
PTZ00273320 PTZ00273, PTZ00273, oxidase reductase; Provisional 8e-46
PLN02984341 PLN02984, PLN02984, oxidoreductase, 2OG-Fe(II) oxy 8e-44
PLN02156335 PLN02156, PLN02156, gibberellin 2-beta-dioxygenase 1e-37
pfam14226113 pfam14226, DIOX_N, non-haem dioxygenase in morphin 7e-37
pfam0317196 pfam03171, 2OG-FeII_Oxy, 2OG-Fe(II) oxygenase supe 2e-36
PLN02365300 PLN02365, PLN02365, 2-oxoglutarate-dependent dioxy 8e-36
PLN03002332 PLN03002, PLN03002, oxidoreductase, 2OG-Fe(II) oxy 3e-27
PLN03176120 PLN03176, PLN03176, flavanone-3-hydroxylase; Provi 2e-08
>gnl|CDD|215220 PLN02393, PLN02393, leucoanthocyanidin dioxygenase like protein Back     alignment and domain information 
 Score =  731 bits (1890), Expect = 0.0
 Identities = 280/363 (77%), Positives = 319/363 (87%), Gaps = 4/363 (1%)

Query: 1   MNCLQSWPEPIVRVQALSESGIKSIPERYIKPSLQRPNSVKHGDRDFDDSQINIPLIDLQ 60
           MNCLQ WPEPIVRVQ+LSESG+ +IP+RY+KP  QRPNS          ++INIP+IDL 
Sbjct: 2   MNCLQDWPEPIVRVQSLSESGLPTIPDRYVKPPSQRPNSSNTTS---APAEINIPVIDLS 58

Query: 61  SIYSNDESVRNETLSCISNACRDWAFFQVVNHGVSPELMKQTREMWREFFNLPLELKQEY 120
           S++S+D  +R+ TL  IS ACR+W FFQVVNHGV PELM + RE WREFF+LPLE+KQ Y
Sbjct: 59  SLFSDDARLRDATLRAISEACREWGFFQVVNHGVRPELMDRAREAWREFFHLPLEVKQRY 118

Query: 121 ANSPTTYEGYGSRLGVEKGAKLDWSDYFFLHFMPHSLRNPNKWPSLPPSCRELVSEYGEN 180
           ANSP TYEGYGSRLGVEKGA LDWSDY+FLH++P SL++PNKWPSLPPSCREL+ EYGE 
Sbjct: 119 ANSPATYEGYGSRLGVEKGAILDWSDYYFLHYLPSSLKDPNKWPSLPPSCRELIEEYGEE 178

Query: 181 LVKLCGVLMKVLSINLGLQEDQFQNAFGGEE-IGACLRVNFYPKCPQPDLTLGLSPHSDP 239
           +VKLCG LMKVLS+NLGL+ED+ QNAFGGE+ +GACLRVN+YPKCPQPDLTLGLSPHSDP
Sbjct: 179 VVKLCGRLMKVLSVNLGLEEDRLQNAFGGEDGVGACLRVNYYPKCPQPDLTLGLSPHSDP 238

Query: 240 GGMTLLLPDENVAGLQVRRGDNWITVKPVPNAFIVNIGDQIQVLSNAIYKSVEHRVIVNS 299
           GGMT+LLPD+NVAGLQVRR D WITVKPVP+AFIVNIGDQIQVLSNAIYKSVEHRVIVNS
Sbjct: 239 GGMTILLPDDNVAGLQVRRDDAWITVKPVPDAFIVNIGDQIQVLSNAIYKSVEHRVIVNS 298

Query: 300 EKDRVSLAFFYNPKSDLLIEPMKEFVTRNRPALYPPMTYDEYRLYIRTKGPCGKAQVESL 359
            K+RVSLAFFYNPKSDL IEP+KE VT +RPALYPPMT+DEYRL+IRTKGP GK+QVESL
Sbjct: 299 AKERVSLAFFYNPKSDLPIEPLKELVTPDRPALYPPMTFDEYRLFIRTKGPRGKSQVESL 358

Query: 360 TSS 362
            S 
Sbjct: 359 KSP 361

Length = 362
>gnl|CDD|215614 PLN03178, PLN03178, leucoanthocyanidin dioxygenase; Provisional Back     alignment and domain information
>gnl|CDD|215404 PLN02758, PLN02758, oxidoreductase, 2OG-Fe(II) oxygenase family protein Back     alignment and domain information
>gnl|CDD|178245 PLN02639, PLN02639, oxidoreductase, 2OG-Fe(II) oxygenase family protein Back     alignment and domain information
>gnl|CDD|215129 PLN02216, PLN02216, protein SRG1 Back     alignment and domain information
>gnl|CDD|166345 PLN02704, PLN02704, flavonol synthase Back     alignment and domain information
>gnl|CDD|215510 PLN02947, PLN02947, oxidoreductase Back     alignment and domain information
>gnl|CDD|178500 PLN02912, PLN02912, oxidoreductase, 2OG-Fe(II) oxygenase family protein Back     alignment and domain information
>gnl|CDD|177810 PLN00417, PLN00417, oxidoreductase, 2OG-Fe(II) oxygenase family protein Back     alignment and domain information
>gnl|CDD|215156 PLN02276, PLN02276, gibberellin 20-oxidase Back     alignment and domain information
>gnl|CDD|178492 PLN02904, PLN02904, oxidoreductase Back     alignment and domain information
>gnl|CDD|178130 PLN02515, PLN02515, naringenin,2-oxoglutarate 3-dioxygenase Back     alignment and domain information
>gnl|CDD|166642 PLN03001, PLN03001, oxidoreductase, 2OG-Fe(II) oxygenase family protein Back     alignment and domain information
>gnl|CDD|215142 PLN02254, PLN02254, gibberellin 3-beta-dioxygenase Back     alignment and domain information
>gnl|CDD|178351 PLN02750, PLN02750, oxidoreductase, 2OG-Fe(II) oxygenase family protein Back     alignment and domain information
>gnl|CDD|215168 PLN02299, PLN02299, 1-aminocyclopropane-1-carboxylate oxidase Back     alignment and domain information
>gnl|CDD|178025 PLN02403, PLN02403, aminocyclopropanecarboxylate oxidase Back     alignment and domain information
>gnl|CDD|178576 PLN02997, PLN02997, flavonol synthase Back     alignment and domain information
>gnl|CDD|226022 COG3491, PcbC, Isopenicillin N synthase and related dioxygenases [General function prediction only] Back     alignment and domain information
>gnl|CDD|215267 PLN02485, PLN02485, oxidoreductase Back     alignment and domain information
>gnl|CDD|140299 PTZ00273, PTZ00273, oxidase reductase; Provisional Back     alignment and domain information
>gnl|CDD|215534 PLN02984, PLN02984, oxidoreductase, 2OG-Fe(II) oxygenase family protein Back     alignment and domain information
>gnl|CDD|177816 PLN02156, PLN02156, gibberellin 2-beta-dioxygenase Back     alignment and domain information
>gnl|CDD|222608 pfam14226, DIOX_N, non-haem dioxygenase in morphine synthesis N-terminal Back     alignment and domain information
>gnl|CDD|217403 pfam03171, 2OG-FeII_Oxy, 2OG-Fe(II) oxygenase superfamily Back     alignment and domain information
>gnl|CDD|177993 PLN02365, PLN02365, 2-oxoglutarate-dependent dioxygenase Back     alignment and domain information
>gnl|CDD|178579 PLN03002, PLN03002, oxidoreductase, 2OG-Fe(II) oxygenase family protein Back     alignment and domain information
>gnl|CDD|178720 PLN03176, PLN03176, flavanone-3-hydroxylase; Provisional Back     alignment and domain information

Conserved Domains Detected by HHsearch ?

Original result of HHsearch against CDD database

ID ?Alignment Graph ?Length ? Definition ? Probability ?
Query 363
PLN02393362 leucoanthocyanidin dioxygenase like protein 100.0
PLN02216357 protein SRG1 100.0
PLN02758361 oxidoreductase, 2OG-Fe(II) oxygenase family protei 100.0
PLN02947374 oxidoreductase 100.0
PLN03178360 leucoanthocyanidin dioxygenase; Provisional 100.0
PLN02904357 oxidoreductase 100.0
PLN02912348 oxidoreductase, 2OG-Fe(II) oxygenase family protei 100.0
PLN02254358 gibberellin 3-beta-dioxygenase 100.0
PLN02276361 gibberellin 20-oxidase 100.0
PLN02639337 oxidoreductase, 2OG-Fe(II) oxygenase family protei 100.0
PLN02704335 flavonol synthase 100.0
KOG0143322 consensus Iron/ascorbate family oxidoreductases [S 100.0
PLN00417348 oxidoreductase, 2OG-Fe(II) oxygenase family protei 100.0
PLN02515358 naringenin,2-oxoglutarate 3-dioxygenase 100.0
PLN02750345 oxidoreductase, 2OG-Fe(II) oxygenase family protei 100.0
PLN02997325 flavonol synthase 100.0
PLN02299321 1-aminocyclopropane-1-carboxylate oxidase 100.0
PTZ00273320 oxidase reductase; Provisional 100.0
PLN02485329 oxidoreductase 100.0
PLN02156335 gibberellin 2-beta-dioxygenase 100.0
PLN03002332 oxidoreductase, 2OG-Fe(II) oxygenase family protei 100.0
PLN02365300 2-oxoglutarate-dependent dioxygenase 100.0
PLN02403303 aminocyclopropanecarboxylate oxidase 100.0
PLN02984341 oxidoreductase, 2OG-Fe(II) oxygenase family protei 100.0
COG3491322 PcbC Isopenicillin N synthase and related dioxygen 100.0
PLN03001262 oxidoreductase, 2OG-Fe(II) oxygenase family protei 100.0
PF0317198 2OG-FeII_Oxy: 2OG-Fe(II) oxygenase superfamily Ent 99.92
PF14226116 DIOX_N: non-haem dioxygenase in morphine synthesis 99.91
PLN03176120 flavanone-3-hydroxylase; Provisional 99.9
PF13640100 2OG-FeII_Oxy_3: 2OG-Fe(II) oxygenase superfamily; 96.31
smart00702178 P4Hc Prolyl 4-hydroxylase alpha subunit homologues 94.14
PF12851171 Tet_JBP: Oxygenase domain of the 2OGFeDO superfami 92.72
PRK05467226 Fe(II)-dependent oxygenase superfamily protein; Pr 91.69
PF13532194 2OG-FeII_Oxy_2: 2OG-Fe(II) oxygenase superfamily; 84.76
TIGR02466201 conserved hypothetical protein. This family consis 84.4
PRK15401213 alpha-ketoglutarate-dependent dioxygenase AlkB; Pr 83.43
>PLN02393 leucoanthocyanidin dioxygenase like protein Back     alignment and domain information 
Probab=100.00  E-value=1.5e-88  Score=659.58  Aligned_cols=358  Identities=78%  Similarity=1.355  Sum_probs=319.3

Q ss_pred             CCCCCCCCCCccchHHHHhcCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCcceeeCCCCCCCChhHHHHHHHHHHHH
Q 017934            1 MNCLQSWPEPIVRVQALSESGIKSIPERYIKPSLQRPNSVKHGDRDFDDSQINIPLIDLQSIYSNDESVRNETLSCISNA   80 (363)
Q Consensus         1 ~~~~~~~~~~~~~v~~l~~~~~~~~p~~y~~~~~~~~~~~~~~~~~~~~~~~~iPvIDls~l~~~d~~~r~~~~~~l~~A   80 (363)
                      |||++.|..+++.|+.|++.+..+||++||+|++++|.......   .....+||||||+.+.+++++.|.+++++|.+|
T Consensus         2 ~~~~~~~~~~~~~~~~~~~~~~~~~p~~~~~~~~~~~~~~~~~~---~~~~~~iPvIDls~l~~~~~~~r~~~~~~l~~A   78 (362)
T PLN02393          2 MNCLQDWPEPIVRVQSLSESGLPTIPDRYVKPPSQRPNSSNTTS---APAEINIPVIDLSSLFSDDARLRDATLRAISEA   78 (362)
T ss_pred             CCcccCCCCccchHHHHHhcCCCcCCHHHcCCchhccccccccc---cCcCCCCCeEECccccCCChHHHHHHHHHHHHH
Confidence            89999999998999999998999999999999999985310000   123457999999999877777788999999999


Q ss_pred             hhhcCeEEEEeCCCCHHHHHHHHHHHHHHhCCCHHHHHhhhcCCCCccccccCCCcccCcccCcccchhcccCCCCCCCC
Q 017934           81 CRDWAFFQVVNHGVSPELMKQTREMWREFFNLPLELKQEYANSPTTYEGYGSRLGVEKGAKLDWSDYFFLHFMPHSLRNP  160 (363)
Q Consensus        81 ~~~~GfF~l~nHGi~~~l~~~~~~~~~~fF~lP~eeK~~~~~~~~~~~GY~~~~~~~~~~~~d~~e~~~~~~~p~~~~~~  160 (363)
                      |++||||||+||||+.++++++++++++||+||.|+|+++...+..++||+...+.......+|+|.+.+...|.....+
T Consensus        79 c~~~GFF~l~nHGI~~~li~~~~~~~~~FF~LP~eeK~~~~~~~~~~~Gy~~~~~~~~~~~~d~~e~~~~~~~~~~~~~~  158 (362)
T PLN02393         79 CREWGFFQVVNHGVRPELMDRAREAWREFFHLPLEVKQRYANSPATYEGYGSRLGVEKGAILDWSDYYFLHYLPSSLKDP  158 (362)
T ss_pred             HHHCcEEEEEeCCCCHHHHHHHHHHHHHHHcCCHHHHHhhhcccCcccccccccccccccccCchhheeeeecCccccch
Confidence            99999999999999999999999999999999999999998665558899654444444578999988765555444557


Q ss_pred             CCCCCCCchHHHHHHHHHHHHHHHHHHHHHHHHHHcCCCHHHHHHhhcCCC-ccceeEeecCCCCCCCCCCCCCCCcccC
Q 017934          161 NKWPSLPPSCRELVSEYGENLVKLCGVLMKVLSINLGLQEDQFQNAFGGEE-IGACLRVNFYPKCPQPDLTLGLSPHSDP  239 (363)
Q Consensus       161 ~~wP~~p~~fr~~~~~y~~~~~~la~~ll~~l~~~Lgl~~~~~~~~~~~~~-~~~~lr~~~YP~~~~~~~~~g~~~HtD~  239 (363)
                      |.||+.+++||+++++|+++|.+|+.+||++|+++||+++++|.+.+.... ..+.+|+||||+|+.++.++|+++|||+
T Consensus       159 n~wP~~~~~fr~~~~~y~~~~~~la~~ll~~la~~Lgl~~~~f~~~~~~~~~~~~~lRl~~YP~~p~~~~~~g~~~HtD~  238 (362)
T PLN02393        159 NKWPSLPPSCRELIEEYGEEVVKLCGRLMKVLSVNLGLEEDRLQNAFGGEDGVGACLRVNYYPKCPQPDLTLGLSPHSDP  238 (362)
T ss_pred             hhCcccchHHHHHHHHHHHHHHHHHHHHHHHHHHHcCCCHHHHHHHhCCCccccceeeeeecCCCCCcccccccccccCC
Confidence            899998899999999999999999999999999999999999999886532 3368999999999999889999999999


Q ss_pred             CCeeEEecCCCCCCeeeeeCCeEEEecCCCCeeEEechhhHHHhhhcccccccceeecCCCCCceeeEeeecCCCCceee
Q 017934          240 GGMTLLLPDENVAGLQVRRGDNWITVKPVPNAFIVNIGDQIQVLSNAIYKSVEHRVIVNSEKDRVSLAFFYNPKSDLLIE  319 (363)
Q Consensus       240 ~~lTiL~~qd~~~GLqV~~~g~W~~V~p~pgalvVnvGD~Le~~TnG~~kS~~HRVv~~~~~~R~Si~~F~~P~~d~~i~  319 (363)
                      |+||||+|+++++||||+++|+|++|+|.||++||||||+||+||||+|||++|||+.++.++|||++||++|+.|++|.
T Consensus       239 g~lTlL~q~~~v~GLQV~~~g~W~~V~p~pgalVVNiGD~l~~~Tng~~kSt~HRVv~~~~~~R~SiafF~~P~~d~~i~  318 (362)
T PLN02393        239 GGMTILLPDDNVAGLQVRRDDAWITVKPVPDAFIVNIGDQIQVLSNAIYKSVEHRVIVNSAKERVSLAFFYNPKSDLPIE  318 (362)
T ss_pred             ceEEEEeeCCCCCcceeeECCEEEECCCCCCeEEEEcchhhHhhcCCeeeccceecccCCCCCEEEEEEEecCCCCceEe
Confidence            99999993357999999999999999999999999999999999999999999999999888999999999999999999


Q ss_pred             cCccccCCCCCCCCCCcCHHHHHHHHHHcCCCCCccccccCC
Q 017934          320 PMKEFVTRNRPALYPPMTYDEYRLYIRTKGPCGKAQVESLTS  361 (363)
Q Consensus       320 Pl~~~v~~~~p~~y~~~~~~ey~~~~~~~~~~g~~~l~~~~~  361 (363)
                      |+++++++++|++|++++|+||+..+.++..++++.++.+|+
T Consensus       319 pl~~~v~~~~p~~y~~~~~~ey~~~~~~~~~~~~~~~~~~~~  360 (362)
T PLN02393        319 PLKELVTPDRPALYPPMTFDEYRLFIRTKGPRGKSQVESLKS  360 (362)
T ss_pred             CcHHhcCCCCCCCCCCccHHHHHHHHHhcccCcchHHhhhcc
Confidence            999999999999999999999999999999999988888775

>PLN02216 protein SRG1 Back     alignment and domain information
>PLN02758 oxidoreductase, 2OG-Fe(II) oxygenase family protein Back     alignment and domain information
>PLN02947 oxidoreductase Back     alignment and domain information
>PLN03178 leucoanthocyanidin dioxygenase; Provisional Back     alignment and domain information
>PLN02904 oxidoreductase Back     alignment and domain information
>PLN02912 oxidoreductase, 2OG-Fe(II) oxygenase family protein Back     alignment and domain information
>PLN02254 gibberellin 3-beta-dioxygenase Back     alignment and domain information
>PLN02276 gibberellin 20-oxidase Back     alignment and domain information
>PLN02639 oxidoreductase, 2OG-Fe(II) oxygenase family protein Back     alignment and domain information
>PLN02704 flavonol synthase Back     alignment and domain information
>KOG0143 consensus Iron/ascorbate family oxidoreductases [Secondary metabolites biosynthesis, transport and catabolism; General function prediction only] Back     alignment and domain information
>PLN00417 oxidoreductase, 2OG-Fe(II) oxygenase family protein Back     alignment and domain information
>PLN02515 naringenin,2-oxoglutarate 3-dioxygenase Back     alignment and domain information
>PLN02750 oxidoreductase, 2OG-Fe(II) oxygenase family protein Back     alignment and domain information
>PLN02997 flavonol synthase Back     alignment and domain information
>PLN02299 1-aminocyclopropane-1-carboxylate oxidase Back     alignment and domain information
>PTZ00273 oxidase reductase; Provisional Back     alignment and domain information
>PLN02485 oxidoreductase Back     alignment and domain information
>PLN02156 gibberellin 2-beta-dioxygenase Back     alignment and domain information
>PLN03002 oxidoreductase, 2OG-Fe(II) oxygenase family protein Back     alignment and domain information
>PLN02365 2-oxoglutarate-dependent dioxygenase Back     alignment and domain information
>PLN02403 aminocyclopropanecarboxylate oxidase Back     alignment and domain information
>PLN02984 oxidoreductase, 2OG-Fe(II) oxygenase family protein Back     alignment and domain information
>COG3491 PcbC Isopenicillin N synthase and related dioxygenases [General function prediction only] Back     alignment and domain information
>PLN03001 oxidoreductase, 2OG-Fe(II) oxygenase family protein Back     alignment and domain information
>PF03171 2OG-FeII_Oxy: 2OG-Fe(II) oxygenase superfamily Entry for Lysyl hydrolases This Prosite entry is a sub-family of the Pfam entry; InterPro: IPR005123 This domain is found in members of the 2-oxoglutarate (2OG) and Fe(II)-dependent oxygenase superfamily [], as well as the C-terminal of prolyl 4-hydroxylase alpha subunit Back     alignment and domain information
>PF14226 DIOX_N: non-haem dioxygenase in morphine synthesis N-terminal; PDB: 3OOX_A 1BK0_A 1IPS_B 1QIQ_A 1OC1_A 2Y86_A 2Y60_A 1W03_A 2VE1_A 1QJF_A Back     alignment and domain information
>PLN03176 flavanone-3-hydroxylase; Provisional Back     alignment and domain information
>PF13640 2OG-FeII_Oxy_3: 2OG-Fe(II) oxygenase superfamily; PDB: 3DKQ_B 3GZE_D 3HQR_A 2Y34_A 2G1M_A 2G19_A 3OUI_A 3OUJ_A 2HBU_A 2Y33_A Back     alignment and domain information
>smart00702 P4Hc Prolyl 4-hydroxylase alpha subunit homologues Back     alignment and domain information
>PF12851 Tet_JBP: Oxygenase domain of the 2OGFeDO superfamily ; InterPro: IPR024779 TETs are 2OG- and Fe(II)-dependent oxygenases that catalyse the conversion of 5 methyl-Cytosine (5-MC) to 5-hydroxymethyl-cytosine (hmC) in cultured cells and in vitro [] Back     alignment and domain information
>PRK05467 Fe(II)-dependent oxygenase superfamily protein; Provisional Back     alignment and domain information
>PF13532 2OG-FeII_Oxy_2: 2OG-Fe(II) oxygenase superfamily; PDB: 2IUW_A 3BTZ_A 3RZL_A 3RZH_A 3S5A_A 3RZG_A 3RZJ_A 3BUC_A 3H8X_A 3H8R_A Back     alignment and domain information
>TIGR02466 conserved hypothetical protein Back     alignment and domain information
>PRK15401 alpha-ketoglutarate-dependent dioxygenase AlkB; Provisional Back     alignment and domain information

Homologous Structure Templates

Structure Templates Detected by BLAST ?

Original result of BLAST against Protein Data Bank

ID ?Alignment Graph ?Length ? Definition ? E-value ?
Query363
1gp5_A356 Anthocyanidin Synthase From Arabidopsis Thaliana Co 5e-67
2brt_A355 Anthocyanidin Synthase From Arabidopsis Thaliana Co 7e-67
1gp4_A356 Anthocyanidin Synthase From Arabidopsis Thaliana (S 3e-65
1w9y_A319 The Structure Of Acc Oxidase Length = 319 4e-46
3oox_A312 Crystal Structure Of A Putative 2og-Fe(Ii) Oxygenas 5e-18
2bjs_A325 Isopenicillin N Synthase C-Terminal Truncation Muta 1e-15
1ips_A331 Isopenicillin N Synthase From Aspergillus Nidulans 1e-15
3on7_A280 Crystal Structure Of A Putative Oxygenase (So_2589) 3e-12
>pdb|1GP5|A Chain A, Anthocyanidin Synthase From Arabidopsis Thaliana Complexed With Trans-Dihydroquercetin Length = 356 Back     alignment and structure 
Iteration: 1

 Score =  251 bits (641), Expect = 5e-67,   Method: Compositional matrix adjust.
 Identities = 130/337 (38%), Positives = 205/337 (60%), Gaps = 9/337 (2%)
Query: 11  IVRVQALSESGIKSIPERYIKPS--LQRPNSVKHGDRDFDDSQINIPLIDLQSIYSNDES 68
           + RV++L++SGI SIP+ YI+P   L+  N V   ++  D  Q+  P IDL++I S+DE 
Sbjct: 4   VERVESLAKSGIISIPKEYIRPKEELESINDVFLEEKKEDGPQV--PTIDLKNIESDDEK 61
Query: 69  VRNETLSCISNACRDWAFFQVVNHGVSPELMKQTREMWREFFNLPLELKQEYANSPTT-- 126
           +R   +  +  A  DW    ++NHG+  +LM++ ++   EFF+L +E K++YAN   T  
Sbjct: 62  IRENCIEELKKASLDWGVMHLINHGIPADLMERVKKAGEEFFSLSVEEKEKYANDQATGK 121
Query: 127 YEGYGSRLGVEKGAKLDWSDYFFLHFMPHSLRNPNKWPSLPPSCRELVSEYGENLVKLCG 186
            +GYGS+L      +L+W DYFF    P   R+ + WP  P    E  SEY + L  L  
Sbjct: 122 IQGYGSKLANNASGQLEWEDYFFHLAYPEEKRDLSIWPKTPSDYIEATSEYAKCLRLLAT 181
Query: 187 VLMKVLSINLGLQEDQFQNAFGG-EEIGACLRVNFYPKCPQPDLTLGLSPHSDPGGMTLL 245
            + K LS+ LGL+ D+ +   GG EE+   +++N+YPKCPQP+L LG+  H+D   +T +
Sbjct: 182 KVFKALSVGLGLEPDRLEKEVGGLEELLLQMKINYYPKCPQPELALGVEAHTDVSALTFI 241
Query: 246 LPDENVAGLQVRRGDNWITVKPVPNAFIVNIGDQIQVLSNAIYKSVEHRVIVNSEKDRVS 305
           L +  V GLQ+     W+T K VP++ +++IGD +++LSN  YKS+ HR +VN EK R+S
Sbjct: 242 LHN-MVPGLQLFYEGKWVTAKCVPDSIVMHIGDTLEILSNGKYKSILHRGLVNKEKVRIS 300
Query: 306 LAFFYN-PKSDLLIEPMKEFVTRNRPALYPPMTYDEY 341
            A F   PK  ++++P+ E V+   PA +PP T+ ++
Sbjct: 301 WAVFCEPPKDKIVLKPLPEMVSVESPAKFPPRTFAQH 337
>pdb|2BRT|A Chain A, Anthocyanidin Synthase From Arabidopsis Thaliana Complexed With Naringenin Length = 355 Back     alignment and structure
>pdb|1GP4|A Chain A, Anthocyanidin Synthase From Arabidopsis Thaliana (Selenomethionine Substituted) Length = 356 Back     alignment and structure
>pdb|1W9Y|A Chain A, The Structure Of Acc Oxidase Length = 319 Back     alignment and structure
>pdb|3OOX|A Chain A, Crystal Structure Of A Putative 2og-Fe(Ii) Oxygenase Family Protein (Cc_0200) From Caulobacter Crescentus At 1.44 A Resolution Length = 312 Back     alignment and structure
>pdb|2BJS|A Chain A, Isopenicillin N Synthase C-Terminal Truncation Mutant Length = 325 Back     alignment and structure
>pdb|1IPS|A Chain A, Isopenicillin N Synthase From Aspergillus Nidulans (Manganese Complex) Length = 331 Back     alignment and structure
>pdb|3ON7|A Chain A, Crystal Structure Of A Putative Oxygenase (So_2589) From Shewanella Oneidensis At 2.20 A Resolution Length = 280 Back     alignment and structure

Structure Templates Detected by RPS-BLAST ?

Original result of RPS-BLAST against PDB70 database

ID ?Alignment Graph ?Length ? Definition ? E-value ?
Query363
1gp6_A356 Leucoanthocyanidin dioxygenase; 2-oxoglutarate dep 1e-172
1w9y_A319 1-aminocyclopropane-1-carboxylate oxidase 1; oxyge 1e-155
1odm_A331 Isopenicillin N synthase; antibiotic biosynthesis, 1e-110
1dcs_A311 Deacetoxycephalosporin C synthase; ferrous oxygena 1e-109
3on7_A280 Oxidoreductase, iron/ascorbate family; structural 2e-93
3oox_A312 Putative 2OG-Fe(II) oxygenase family protein; stru 3e-89
1vt4_I 1221 APAF-1 related killer DARK; drosophila apoptosome, 4e-15
1vt4_I 1221 APAF-1 related killer DARK; drosophila apoptosome, 2e-06
>1gp6_A Leucoanthocyanidin dioxygenase; 2-oxoglutarate dependent dioxygenase, flavonoid biosynthesis; HET: MES QUE DH2; 1.75A {Arabidopsis thaliana} SCOP: b.82.2.1 PDB: 1gp5_A* 1gp4_A* 2brt_A* Length = 356 Back     alignment and structure
 Score =  483 bits (1245), Expect = e-172
 Identities = 128/355 (36%), Positives = 207/355 (58%), Gaps = 11/355 (3%)

Query: 10  PIVRVQALSESGIKSIPERYIKPSLQRPNSVKHGDRDFDDSQINIPLIDLQSIYSNDESV 69
            + RV++L++SGI SIP+ YI+P  +  +       +  +    +P IDL++I S+DE +
Sbjct: 3   AVERVESLAKSGIISIPKEYIRPKEELESINDVFLEEKKEDGPQVPTIDLKNIESDDEKI 62

Query: 70  RNETLSCISNACRDWAFFQVVNHGVSPELMKQTREMWREFFNLPLELKQEYAN--SPTTY 127
           R   +  +  A  DW    ++NHG+  +LM++ ++   EFF+L +E K++YAN  +    
Sbjct: 63  RENCIEELKKASLDWGVMHLINHGIPADLMERVKKAGEEFFSLSVEEKEKYANDQATGKI 122

Query: 128 EGYGSRLGVEKGAKLDWSDYFFLHFMPHSLRNPNKWPSLPPSCRELVSEYGENLVKLCGV 187
           +GYGS+L      +L+W DYFF    P   R+ + WP  P    E  SEY + L  L   
Sbjct: 123 QGYGSKLANNASGQLEWEDYFFHLAYPEEKRDLSIWPKTPSDYIEATSEYAKCLRLLATK 182

Query: 188 LMKVLSINLGLQEDQFQNAFGG-EEIGACLRVNFYPKCPQPDLTLGLSPHSDPGGMTLLL 246
           + K LS+ LGL+ D+ +   GG EE+   +++N+YPKCPQP+L LG+  H+D   +T +L
Sbjct: 183 VFKALSVGLGLEPDRLEKEVGGLEELLLQMKINYYPKCPQPELALGVEAHTDVSALTFIL 242

Query: 247 PDENVAGLQVRRGDNWITVKPVPNAFIVNIGDQIQVLSNAIYKSVEHRVIVNSEKDRVSL 306
            +  V GLQ+     W+T K VP++ +++IGD +++LSN  YKS+ HR +VN EK R+S 
Sbjct: 243 HNM-VPGLQLFYEGKWVTAKCVPDSIVMHIGDTLEILSNGKYKSILHRGLVNKEKVRISW 301

Query: 307 AFFYNPKSD-LLIEPMKEFVTRNRPALYPPMTYDEY-RLYIRTKGPCGKAQVESL 359
           A F  P  D ++++P+ E V+   PA +PP T+ ++    +      GK Q E +
Sbjct: 302 AVFCEPPKDKIVLKPLPEMVSVESPAKFPPRTFAQHIEHKLF-----GKEQEELV 351
>1w9y_A 1-aminocyclopropane-1-carboxylate oxidase 1; oxygenase, 2OG oxygenase, ACCO, ACC oxidase; 2.1A {Petunia hybrida} SCOP: b.82.2.1 PDB: 1wa6_X Length = 319 Back     alignment and structure
>1odm_A Isopenicillin N synthase; antibiotic biosynthesis, B-lactam antibiotic, oxygenase, penicillin biosynthesis, oxidoreductase, iron; HET: ASV; 1.15A {Emericella nidulans} SCOP: b.82.2.1 PDB: 1blz_A* 1hb1_A* 1hb2_A* 1hb3_A* 1hb4_A* 1ips_A 1obn_A* 1oc1_A* 1bk0_A* 1odn_A* 1qiq_A* 1qje_A* 1qjf_A* 1uzw_A* 1w03_A* 1w04_A* 1w05_A* 1w06_A* 1w3v_A* 1w3x_A* ... Length = 331 Back     alignment and structure
>1dcs_A Deacetoxycephalosporin C synthase; ferrous oxygenase, 2-oxoglutarate, oxidoreduc antibiotics, merohedral twinning; 1.30A {Streptomyces clavuligerus} SCOP: b.82.2.1 PDB: 1rxf_A 1rxg_A* 1unb_A* 1uo9_A 1uob_A* 1uof_A* 1uog_A* 2jb8_A 1w28_A 1w2a_X 1w2n_A* 1w2o_A* 1hjg_A 1hjf_A 1e5h_A 1e5i_A* Length = 311 Back     alignment and structure
>3on7_A Oxidoreductase, iron/ascorbate family; structural genomics, joint center for structural genomics, J protein structure initiative; 2.20A {Shewanella oneidensis} Length = 280 Back     alignment and structure
>3oox_A Putative 2OG-Fe(II) oxygenase family protein; structural genomics, joint center for structural genomics; HET: MSE; 1.44A {Caulobacter crescentus CB15} Length = 312 Back     alignment and structure
>1vt4_I APAF-1 related killer DARK; drosophila apoptosome, apoptosis, programmed cell death; HET: DTP; 6.90A {Drosophila melanogaster} PDB: 3iz8_A* Length = 1221 Back     alignment and structure
>1vt4_I APAF-1 related killer DARK; drosophila apoptosome, apoptosis, programmed cell death; HET: DTP; 6.90A {Drosophila melanogaster} PDB: 3iz8_A* Length = 1221 Back     alignment and structure

Structure Templates Detected by HHsearch ?

Original result of HHsearch against PDB70 database

ID ?Alignment Graph ?Length ? Definition ? Probability ?
Query363
1gp6_A356 Leucoanthocyanidin dioxygenase; 2-oxoglutarate dep 100.0
1w9y_A319 1-aminocyclopropane-1-carboxylate oxidase 1; oxyge 100.0
3oox_A312 Putative 2OG-Fe(II) oxygenase family protein; stru 100.0
1odm_A331 Isopenicillin N synthase; antibiotic biosynthesis, 100.0
1dcs_A311 Deacetoxycephalosporin C synthase; ferrous oxygena 100.0
3on7_A280 Oxidoreductase, iron/ascorbate family; structural 100.0
2rg4_A216 Uncharacterized protein; rhodobacterales, oceanico 93.14
3dkq_A243 PKHD-type hydroxylase SBAL_3634; putative oxygenas 93.05
2hbt_A247 EGL nine homolog 1; prolyl hydroxylase, hypoxia in 86.16
>1gp6_A Leucoanthocyanidin dioxygenase; 2-oxoglutarate dependent dioxygenase, flavonoid biosynthesis; HET: MES QUE DH2; 1.75A {Arabidopsis thaliana} SCOP: b.82.2.1 PDB: 1gp5_A* 1gp4_A* 2brt_A* Back     alignment and structure
Probab=100.00  E-value=1.2e-86  Score=645.15  Aligned_cols=343  Identities=36%  Similarity=0.666  Sum_probs=303.9

Q ss_pred             CccchHHHHhcCCCCCCCCCCCCCCCCCCCCCCCCCCCC-C-CCCCcceeeCCCCCCCChhHHHHHHHHHHHHhhhcCeE
Q 017934           10 PIVRVQALSESGIKSIPERYIKPSLQRPNSVKHGDRDFD-D-SQINIPLIDLQSIYSNDESVRNETLSCISNACRDWAFF   87 (363)
Q Consensus        10 ~~~~v~~l~~~~~~~~p~~y~~~~~~~~~~~~~~~~~~~-~-~~~~iPvIDls~l~~~d~~~r~~~~~~l~~A~~~~GfF   87 (363)
                      ++++||+|+++|+.+||++|++|++++|........  . . ...+||||||+.+.+++++.|.+++++|.+||++||||
T Consensus         3 ~~~~v~~l~~~~~~~vP~~~~~p~~~~~~~~~~~~~--~~~~~~~~iPvIDls~l~~~~~~~~~~~~~~l~~A~~~~GFF   80 (356)
T 1gp6_A            3 AVERVESLAKSGIISIPKEYIRPKEELESINDVFLE--EKKEDGPQVPTIDLKNIESDDEKIRENCIEELKKASLDWGVM   80 (356)
T ss_dssp             CCCCHHHHHHTTCSSCCGGGSCCHHHHTTCCCHHHH--HHCCCSCCCCEEECTTTTCSCHHHHHHHHHHHHHHHHHTSEE
T ss_pred             CcccHHHHHhcCCCCCCHHhcCCchhcccccccccc--cccccCCCCCEEEchhccCCChHHHHHHHHHHHHHHHhCCEE
Confidence            456899999999999999999999888764210000  0 0 02369999999998777777889999999999999999


Q ss_pred             EEEeCCCCHHHHHHHHHHHHHHhCCCHHHHHhhhcCCC--CccccccCCCcccCcccCcccchhcccCCCCCCCCCCCCC
Q 017934           88 QVVNHGVSPELMKQTREMWREFFNLPLELKQEYANSPT--TYEGYGSRLGVEKGAKLDWSDYFFLHFMPHSLRNPNKWPS  165 (363)
Q Consensus        88 ~l~nHGi~~~l~~~~~~~~~~fF~lP~eeK~~~~~~~~--~~~GY~~~~~~~~~~~~d~~e~~~~~~~p~~~~~~~~wP~  165 (363)
                      ||+||||+.++++++++++++||+||.|+|+++.....  .++||+........+..||+|.|.+...|......|.||+
T Consensus        81 ~v~nHGi~~~l~~~~~~~~~~FF~lP~eeK~~~~~~~~~~~~~Gy~~~~~~~~~~~~d~kE~~~~~~~p~~~~~~~~wP~  160 (356)
T 1gp6_A           81 HLINHGIPADLMERVKKAGEEFFSLSVEEKEKYANDQATGKIQGYGSKLANNASGQLEWEDYFFHLAYPEEKRDLSIWPK  160 (356)
T ss_dssp             EEESCSCCHHHHHHHHHHHHHHHTSCHHHHGGGBCBGGGTBCSEEECCCCCSTTCCCCSCEEEEEEEESGGGCCGGGSCC
T ss_pred             EEeCCCCCHHHHHHHHHHHHHHHCCCHHHHHhhcccccccCccccCcCcccCCCCCCChhheeeeecCCccccccccCCC
Confidence            99999999999999999999999999999999987654  4899987665555567899999988766654455689999


Q ss_pred             CCchHHHHHHHHHHHHHHHHHHHHHHHHHHcCCCHHHHHHhhcCC-CccceeEeecCCCCCCCCCCCCCCCcccCCCeeE
Q 017934          166 LPPSCRELVSEYGENLVKLCGVLMKVLSINLGLQEDQFQNAFGGE-EIGACLRVNFYPKCPQPDLTLGLSPHSDPGGMTL  244 (363)
Q Consensus       166 ~p~~fr~~~~~y~~~~~~la~~ll~~l~~~Lgl~~~~~~~~~~~~-~~~~~lr~~~YP~~~~~~~~~g~~~HtD~~~lTi  244 (363)
                      .+++||+++++|+++|.+|+.+||++|+++|||++++|.+.+... ...+.||+||||||++++.++|+++|||+|+|||
T Consensus       161 ~~~~fr~~~~~y~~~~~~l~~~ll~~la~~Lgl~~~~f~~~~~~~~~~~~~lrl~~YPp~~~~~~~~g~~~HtD~g~lTl  240 (356)
T 1gp6_A          161 TPSDYIEATSEYAKCLRLLATKVFKALSVGLGLEPDRLEKEVGGLEELLLQMKINYYPKCPQPELALGVEAHTDVSALTF  240 (356)
T ss_dssp             SSTTHHHHHHHHHHHHHHHHHHHHHHHHHHTTSCTTHHHHHTTHHHHCEEEEEEEEECCCSSTTTCCSEEEECCCSSEEE
T ss_pred             cchhhhHHHHHHHHHHHHHHHHHHHHHHHHcCCCHHHHHHHhcccCCccceeeeeecCCCCCcccccCcCCccCCCeEEE
Confidence            999999999999999999999999999999999999999988620 1346899999999999999999999999999999


Q ss_pred             EecCCCCCCeeeeeCCeEEEecCCCCeeEEechhhHHHhhhcccccccceeecCCCCCceeeEeeecCCCCc-eeecCcc
Q 017934          245 LLPDENVAGLQVRRGDNWITVKPVPNAFIVNIGDQIQVLSNAIYKSVEHRVIVNSEKDRVSLAFFYNPKSDL-LIEPMKE  323 (363)
Q Consensus       245 L~~qd~~~GLqV~~~g~W~~V~p~pgalvVnvGD~Le~~TnG~~kS~~HRVv~~~~~~R~Si~~F~~P~~d~-~i~Pl~~  323 (363)
                      |+ ||+++||||+++|+|++|+|+||+|||||||+||+||||+|||++|||+++++++|||++||++|+.|+ +|+|+++
T Consensus       241 L~-qd~v~GLQV~~~g~Wi~V~p~pgalvVNiGD~l~~~TnG~~kS~~HRVv~~~~~~R~Sia~F~~P~~d~~~i~pl~~  319 (356)
T 1gp6_A          241 IL-HNMVPGLQLFYEGKWVTAKCVPDSIVMHIGDTLEILSNGKYKSILHRGLVNKEKVRISWAVFCEPPKDKIVLKPLPE  319 (356)
T ss_dssp             EE-ECSCCCEEEEETTEEEECCCCTTCEEEEECHHHHHHTTTSSCCCCEEECCCSSCCEEEEEEEEECCTTTCEECCCGG
T ss_pred             EE-EcCCCCeEEecCCcEEECcCCCCeEEEEeccHHHHhcCCEeeccCceecCCCCCCEEEEEEeecCCCCCcEEeCChh
Confidence            99 889999999999999999999999999999999999999999999999999889999999999999999 9999999


Q ss_pred             ccCCCCCCCCCCcCHHHHHHHHHHcCCCCCcc
Q 017934          324 FVTRNRPALYPPMTYDEYRLYIRTKGPCGKAQ  355 (363)
Q Consensus       324 ~v~~~~p~~y~~~~~~ey~~~~~~~~~~g~~~  355 (363)
                      ++++++|++|+++||+||+..++.++++|+..
T Consensus       320 ~~~~~~p~~y~~~t~~eyl~~~~~~~~d~~~~  351 (356)
T 1gp6_A          320 MVSVESPAKFPPRTFAQHIEHKLFGKEQEELV  351 (356)
T ss_dssp             GCCSSSCCSSCCEEHHHHHHHHHHHHHHHHC-
T ss_pred             hcCCCCCccCCCccHHHHHHHHHHhccCcchh
Confidence            99999999999999999999988887776643
>1w9y_A 1-aminocyclopropane-1-carboxylate oxidase 1; oxygenase, 2OG oxygenase, ACCO, ACC oxidase; 2.1A {Petunia hybrida} SCOP: b.82.2.1 PDB: 1wa6_X Back     alignment and structure
>3oox_A Putative 2OG-Fe(II) oxygenase family protein; structural genomics, joint center for structural genomics; HET: MSE; 1.44A {Caulobacter crescentus CB15} Back     alignment and structure
>1odm_A Isopenicillin N synthase; antibiotic biosynthesis, B-lactam antibiotic, oxygenase, penicillin biosynthesis, oxidoreductase, iron; HET: ASV; 1.15A {Emericella nidulans} SCOP: b.82.2.1 PDB: 1blz_A* 1hb1_A* 1hb2_A* 1hb3_A* 1hb4_A* 1ips_A 1obn_A* 1oc1_A* 1bk0_A* 1odn_A* 1qiq_A* 1qje_A* 1qjf_A* 1uzw_A* 1w03_A* 1w04_A* 1w05_A* 1w06_A* 1w3v_A* 1w3x_A* ... Back     alignment and structure
>1dcs_A Deacetoxycephalosporin C synthase; ferrous oxygenase, 2-oxoglutarate, oxidoreduc antibiotics, merohedral twinning; 1.30A {Streptomyces clavuligerus} SCOP: b.82.2.1 PDB: 1rxf_A 1rxg_A* 1unb_A* 1uo9_A 1uob_A* 1uof_A* 1uog_A* 2jb8_A 1w28_A 1w2a_X 1w2n_A* 1w2o_A* 1hjg_A 1hjf_A 1e5h_A 1e5i_A* Back     alignment and structure
>3on7_A Oxidoreductase, iron/ascorbate family; structural genomics, joint center for structural genomics, J protein structure initiative; 2.20A {Shewanella oneidensis} Back     alignment and structure
>2rg4_A Uncharacterized protein; rhodobacterales, oceanicola granulosus HTCC2516, Q2CBJ1_9RHO structural genomics, PSI-2; 1.90A {Oceanicola granulosus} PDB: 3bvc_A Back     alignment and structure
>3dkq_A PKHD-type hydroxylase SBAL_3634; putative oxygenase, structural genomics, JOI for structural genomics, JCSG; 2.26A {Shewanella baltica OS155} Back     alignment and structure
>2hbt_A EGL nine homolog 1; prolyl hydroxylase, hypoxia inducible factor, HIF, 2- oxoglutarate, oxygenase, oxidoreductase; HET: UN9; 1.60A {Homo sapiens} PDB: 2hbu_A* 2g1m_A* 3hqu_A* 3hqr_A* 2y33_A* 2y34_A* 2g19_A* 3ouj_A* 3ouh_A* 3oui_A* Back     alignment and structure

Homologous Structure Domains

Structure Domains Detected by RPS-BLAST ?

Original result of RPS-BLAST against SCOP70(version1.75) database

ID ?Alignment Graph ?Length ? Definition ? E-value ?
Query 363
d1gp6a_349 b.82.2.1 (A:) Anthocyanidin synthase {Mouse-ear cr 2e-94
d1w9ya1307 b.82.2.1 (A:2-308) 1-aminocyclopropane-1-carboxyla 1e-74
d1dcsa_311 b.82.2.1 (A:) Deacetoxycephalosporin C synthase {S 6e-57
d1odma_329 b.82.2.1 (A:) Isopenicillin N synthase {Emericella 2e-55
>d1gp6a_ b.82.2.1 (A:) Anthocyanidin synthase {Mouse-ear cress (Arabidopsis thaliana) [TaxId: 3702]} Length = 349 Back     information, alignment and structure

class: All beta proteins
fold: Double-stranded beta-helix
superfamily: Clavaminate synthase-like
family: Penicillin synthase-like
domain: Anthocyanidin synthase
species: Mouse-ear cress (Arabidopsis thaliana) [TaxId: 3702]

 Score =  283 bits (725), Expect = 2e-94
 Identities = 128/355 (36%), Positives = 206/355 (58%), Gaps = 15/355 (4%)

Query: 10  PIVRVQALSESGIKSIPERYIKPSLQRPNSVKHGDRDFDDSQINIPLIDLQSIYSNDESV 69
            + RV++L++SGI SIP+ YI+P  +  +       +  +    +P IDL++I S+DE +
Sbjct: 2   AVERVESLAKSGIISIPKEYIRPKEELESINDVFLEEKKEDGPQVPTIDLKNIESDDEKI 61

Query: 70  RNETLSCISNACRDWAFFQVVNHGVSPELMKQTREMWREFFNLPLELKQEYANSPTT--Y 127
           R   +  +  A  DW    ++NHG+  +LM++ ++   EFF+L +E K++YAN   T   
Sbjct: 62  RENCIEELKKASLDWGVMHLINHGIPADLMERVKKAGEEFFSLSVEEKEKYANDQATGKI 121

Query: 128 EGYGSRLGVEKGAKLDWSDYFFLHFMPHSLRNPNKWPSLPPSCRELVSEYGENLVKLCGV 187
           +GYGS+L      +L+W DYFF    P   R+ + WP  P    E  SEY + L  L   
Sbjct: 122 QGYGSKLANNASGQLEWEDYFFHLAYPEEKRDLSIWPKTPSDYIEATSEYAKCLRLLATK 181

Query: 188 LMKVLSINLGLQEDQFQNAFG-GEEIGACLRVNFYPKCPQPDLTLGLSPHSDPGGMTLLL 246
           + K LS+ LGL+ D+ +   G  EE+   +++N+YPKCPQP+L LG+  H+D   +T +L
Sbjct: 182 VFKALSVGLGLEPDRLEKEVGGLEELLLQMKINYYPKCPQPELALGVEAHTDVSALTFIL 241

Query: 247 PDENVAGLQVRRGDNWITVKPVPNAFIVNIGDQIQVLSNAIYKSVEHRVIVNSEKDRVSL 306
            +    GLQ+     W+T K VP++ +++IGD +++LSN  YKS+ HR +VN EK R+S 
Sbjct: 242 HNMV-PGLQLFYEGKWVTAKCVPDSIVMHIGDTLEILSNGKYKSILHRGLVNKEKVRISW 300

Query: 307 AFFYNPKSD-LLIEPMKEFVTRNRPALYPPMTYDEY---RLYIRTKGPCGKAQVE 357
           A F  P  D ++++P+ E V+   PA +PP T+ ++   +L+       GK Q E
Sbjct: 301 AVFCEPPKDKIVLKPLPEMVSVESPAKFPPRTFAQHIEHKLF-------GKEQEE 348
>d1w9ya1 b.82.2.1 (A:2-308) 1-aminocyclopropane-1-carboxylate oxidase 1 {Petunia hybrida [TaxId: 4102]} Length = 307 Back     information, alignment and structure
>d1dcsa_ b.82.2.1 (A:) Deacetoxycephalosporin C synthase {Streptomyces clavuligerus [TaxId: 1901]} Length = 311 Back     information, alignment and structure
>d1odma_ b.82.2.1 (A:) Isopenicillin N synthase {Emericella nidulans [TaxId: 162425]} Length = 329 Back     information, alignment and structure

Homologous Domains Detected by HHsearch ?

Original result of HHsearch against SCOP70(version1.75) database

ID ?Alignment Graph ?Length ? Definition ? Probability ?
Query363
d1gp6a_349 Anthocyanidin synthase {Mouse-ear cress (Arabidops 100.0
d1w9ya1307 1-aminocyclopropane-1-carboxylate oxidase 1 {Petun 100.0
d1odma_329 Isopenicillin N synthase {Emericella nidulans [Tax 100.0
d1dcsa_311 Deacetoxycephalosporin C synthase {Streptomyces cl 100.0
d2iuwa1210 AlkB homolog 3 {Human (Homo sapiens) [TaxId: 9606] 87.47
d2fdia1200 Alkylated DNA repair protein AlkB {Escherichia col 82.89
>d1gp6a_ b.82.2.1 (A:) Anthocyanidin synthase {Mouse-ear cress (Arabidopsis thaliana) [TaxId: 3702]} Back     information, alignment and structure
class: All beta proteins
fold: Double-stranded beta-helix
superfamily: Clavaminate synthase-like
family: Penicillin synthase-like
domain: Anthocyanidin synthase
species: Mouse-ear cress (Arabidopsis thaliana) [TaxId: 3702]

Probab=100.00  E-value=7e-83  Score=615.68  Aligned_cols=336  Identities=37%  Similarity=0.694  Sum_probs=295.4

Q ss_pred             ccchHHHHhcCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCcceeeCCCCCCCChhHHHHHHHHHHHHhhhcCeEEEE
Q 017934           11 IVRVQALSESGIKSIPERYIKPSLQRPNSVKHGDRDFDDSQINIPLIDLQSIYSNDESVRNETLSCISNACRDWAFFQVV   90 (363)
Q Consensus        11 ~~~v~~l~~~~~~~~p~~y~~~~~~~~~~~~~~~~~~~~~~~~iPvIDls~l~~~d~~~r~~~~~~l~~A~~~~GfF~l~   90 (363)
                      +.+||.||++|+.+||++||+|++++|.+.............+||||||+.+.++|++.|++++++|.+||++||||||+
T Consensus         3 ~~~~~~~~~~~~~~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~IPvIDls~l~~~d~~~r~~~~~~l~~A~~~~GFf~l~   82 (349)
T d1gp6a_           3 VERVESLAKSGIISIPKEYIRPKEELESINDVFLEEKKEDGPQVPTIDLKNIESDDEKIRENCIEELKKASLDWGVMHLI   82 (349)
T ss_dssp             CCCHHHHHHTTCSSCCGGGSCCHHHHTTCCCHHHHHHCCCSCCCCEEECTTTTCSCHHHHHHHHHHHHHHHHHTSEEEEE
T ss_pred             CcchHHHHhCCCccCCHhhcCChhhcCCCCccccccccCCCCCcCeEEChhcCCCCHHHHHHHHHHHHHHHHhCCEEEEE
Confidence            45799999999999999999999999875210000002334589999999999889989999999999999999999999


Q ss_pred             eCCCCHHHHHHHHHHHHHHhCCCHHHHHhhhcCCC--CccccccCCCcccCcccCcccchhcccCCCCCCCCCCCCCCCc
Q 017934           91 NHGVSPELMKQTREMWREFFNLPLELKQEYANSPT--TYEGYGSRLGVEKGAKLDWSDYFFLHFMPHSLRNPNKWPSLPP  168 (363)
Q Consensus        91 nHGi~~~l~~~~~~~~~~fF~lP~eeK~~~~~~~~--~~~GY~~~~~~~~~~~~d~~e~~~~~~~p~~~~~~~~wP~~p~  168 (363)
                      ||||+.++++++++++++||+||.|+|+++.....  .+.||+........+..+|.+.+.....+.....+|.||+.++
T Consensus        83 nHGI~~~li~~~~~~~~~FF~lP~eeK~k~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~n~wp~~~~  162 (349)
T d1gp6a_          83 NHGIPADLMERVKKAGEEFFSLSVEEKEKYANDQATGKIQGYGSKLANNASGQLEWEDYFFHLAYPEEKRDLSIWPKTPS  162 (349)
T ss_dssp             SCSCCHHHHHHHHHHHHHHHTSCHHHHGGGBCBGGGTBCSEEECCCCCSTTCCCCSCEEEEEEEESGGGCCGGGSCCSST
T ss_pred             ccCCCHHHHHHHHHHHHHHHcCCHHHHhhhhcccccCCccccccccccccccccchhhhhcccccccccccccccccccc
Confidence            99999999999999999999999999999976432  2556665555555567788777665555555566789999999


Q ss_pred             hHHHHHHHHHHHHHHHHHHHHHHHHHHcCCCHHHHHHhhcC-CCccceeEeecCCCCCCCCCCCCCCCcccCCCeeEEec
Q 017934          169 SCRELVSEYGENLVKLCGVLMKVLSINLGLQEDQFQNAFGG-EEIGACLRVNFYPKCPQPDLTLGLSPHSDPGGMTLLLP  247 (363)
Q Consensus       169 ~fr~~~~~y~~~~~~la~~ll~~l~~~Lgl~~~~~~~~~~~-~~~~~~lr~~~YP~~~~~~~~~g~~~HtD~~~lTiL~~  247 (363)
                      .|++.+++|+++|.+|+++|+++|+++||+++++|.+.+.. +...+.||++||||++.++..+|+++|||+|+||||+ 
T Consensus       163 ~f~e~~~~~~~~~~~la~~ll~~la~~Lgl~~~~~~~~~~~~~~~~~~lrl~~Yp~~~~~~~~~g~~~HtD~g~lTlL~-  241 (349)
T d1gp6a_         163 DYIEATSEYAKCLRLLATKVFKALSVGLGLEPDRLEKEVGGLEELLLQMKINYYPKCPQPELALGVEAHTDVSALTFIL-  241 (349)
T ss_dssp             THHHHHHHHHHHHHHHHHHHHHHHHHHTTSCTTHHHHHTTHHHHCEEEEEEEEECCCSSTTTCCSEEEECCCSSEEEEE-
T ss_pred             hHHHHHHHHHHHHHHHHHhhhHHHHHHcCCCHHHHHHHhccccccceeeeecccccccchhhccccccCCCCcceEEEe-
Confidence            99999999999999999999999999999999999888753 2244689999999999999999999999999999999 


Q ss_pred             CCCCCCeeeeeCCeEEEecCCCCeeEEechhhHHHhhhcccccccceeecCCCCCceeeEeeecCCCCcee-ecCccccC
Q 017934          248 DENVAGLQVRRGDNWITVKPVPNAFIVNIGDQIQVLSNAIYKSVEHRVIVNSEKDRVSLAFFYNPKSDLLI-EPMKEFVT  326 (363)
Q Consensus       248 qd~~~GLqV~~~g~W~~V~p~pgalvVnvGD~Le~~TnG~~kS~~HRVv~~~~~~R~Si~~F~~P~~d~~i-~Pl~~~v~  326 (363)
                      |++++||||+++|+|++|+|.+|++|||+||+||+||||+|||++|||+++++++|||++||++|+.|++| +|+|+||+
T Consensus       242 q~~~~GLqv~~~g~W~~V~p~~~a~vVNvGD~l~~~TnG~~~St~HRVv~~~~~~R~Si~~F~~p~~d~~i~~pl~~~v~  321 (349)
T d1gp6a_         242 HNMVPGLQLFYEGKWVTAKCVPDSIVMHIGDTLEILSNGKYKSILHRGLVNKEKVRISWAVFCEPPKDKIVLKPLPEMVS  321 (349)
T ss_dssp             ECSCCCEEEEETTEEEECCCCTTCEEEEECHHHHHHTTTSSCCCCEEECCCSSCCEEEEEEEEECCTTTCEECCCGGGCC
T ss_pred             ccCCcceeeecCCceEEccCCCCCeeeeHHhHHHHHhCCCccCcCccccCCCCCCeEEEEEEecCCCcceeecCCHHHcC
Confidence            89999999999999999999999999999999999999999999999999999999999999999999765 89999999


Q ss_pred             CCCCCCCCCcCHHHHHHHHHH
Q 017934          327 RNRPALYPPMTYDEYRLYIRT  347 (363)
Q Consensus       327 ~~~p~~y~~~~~~ey~~~~~~  347 (363)
                      +++|++|+++|++||++.++.
T Consensus       322 ~~~p~~y~~~t~~e~~~~rl~  342 (349)
T d1gp6a_         322 VESPAKFPPRTFAQHIEHKLF  342 (349)
T ss_dssp             SSSCCSSCCEEHHHHHHHHHH
T ss_pred             CCCCCCCCCccHHHHHHHHHh
Confidence            999999999999999998764
>d1w9ya1 b.82.2.1 (A:2-308) 1-aminocyclopropane-1-carboxylate oxidase 1 {Petunia hybrida [TaxId: 4102]} Back     information, alignment and structure
>d1odma_ b.82.2.1 (A:) Isopenicillin N synthase {Emericella nidulans [TaxId: 162425]} Back     information, alignment and structure
>d1dcsa_ b.82.2.1 (A:) Deacetoxycephalosporin C synthase {Streptomyces clavuligerus [TaxId: 1901]} Back     information, alignment and structure
>d2iuwa1 b.82.2.10 (A:70-279) AlkB homolog 3 {Human (Homo sapiens) [TaxId: 9606]} Back     information, alignment and structure
>d2fdia1 b.82.2.10 (A:15-214) Alkylated DNA repair protein AlkB {Escherichia coli [TaxId: 562]} Back     information, alignment and structure