Citrus Sinensis ID: 018000

Local Sequence Feature Prediction

Prediction and MethodResult
Residue Number Marker
Protein Sequence ?
Secondary Structure (Consensus) ?
Disordered Region (Consensus) ?
Transmembrane Helix (Consensus) ?
Signal Peptide (Consensus) ?
Coiled Coil (COILS) ?
 
--------10--------20--------30--------40--------50--------60--------70--------80--------90-------100-------110-------120-------130-------140-------150-------160-------170-------180-------190-------200-------210-------220-------230-------240-------250-------260-------270-------280-------290-------300-------310-------320-------330-------340-------350-------360--
MEPDTEPRGTVTQREQSMVLNDVNMLYHIYATVPPIAQTLMMELQRKNHVEYLLRGLQQLGPSFCSLDANRPWICYWILHSMALLGEFVDADLEDRTIEFLSRCQDPNGGYGGGPGQMPHLATTYAAVNALISLGGEKSLPSINRSKVYTFLKCMKDPSGAFRMHDAGEIDVRACYTAISVASILNILDDELLQNVGNYILSCQTYEGGIAGEPGSEAHGGYTFCGLAAMILINEADRLDLDALIGWVVFRQGVEGGFQGRTNKLVDGCYSFWQGGVFALLRRFHSIIGESPTPVDQRGAECSIDNTQTTTASDVSEGDGSSDEISSQGDEHCHFQHREREPLFHSIALQRYLLLCSQVQIL
ccccccccccccHHHHHHHHHHHHHHHHHHccccccccccccHHcHHHHHHHHHHHHccccccccccccccHHHHHHHHHHHHHccccccccHHHHHHHHHHHcccccccccccccccccHHHHHHHHHHHHHcccccccccccHHHHHHHHHHcccccccEECccccccccHHHHHHHHHHHHHHcccHHHHHHHHHHHHHcccccccccccccccccccHHHHHHHHHHHHcccccccHHHHHHHHHHHcccccccccccccccccHHHHHHHHHHHHHHHHHHccccccccccHHHHHHHHcccccccccccccccccccccccccccccccccccccccccHHHHHHHHHHccccccc
*****EPRGTVTQREQSMVLNDVNMLYHIYATVPPIAQTLMMELQRKNHVEYLLRGLQQLGPSFCSLDANRPWICYWILHSMALLGEFVDADLEDRTIEFLSRCQDPNGGYGGGPGQMPHLATTYAAVNALISLGGEKSLPSINRSKVYTFLKCMKDPSGAFRMHDAGEIDVRACYTAISVASILNILDDELLQNVGNYILSCQTYEGGIAGEPGSEAHGGYTFCGLAAMILINEADRLDLDALIGWVVFRQGVEGGFQGRTNKLVDGCYSFWQGGVFALLRRFHSIIGESPTPVDQRGAECSIDNTQTTTASDVSEGDGSSDEISSQGDEHCHFQHREREPLFHSIALQRYLLLCSQVQIL
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MEPDTEPRGTVTQREQSMVLNDVNMLYHIYATVPPIAQTLMMELQRKNHVEYLLRGLQQLGPSFCSLDANRPWICYWILHSMALLGEFVDADLEDRTIEFLSRCQDPNGGYGGGPGQMPHLATTYAAVNALISLGGEKSLPSINRSKVYTFLKCMKDPSGAFRMHDAGEIDVRACYTAISVASILNILDDELLQNVGNYILSCQTYEGGIAGEPGSEAHGGYTFCGLAAMILINEADRLDLDALIGWVVFRQGVEGGFQGRTNKLVDGCYSFWQGGVFALLRRFHSIIGESPTPVDQRGAECSIDNTQTTTASDVSEGDGSSDEISSQGDEHCHFQHREREPLFHSIALQRYLLLCSQVQIL

Function Prediction

Annotation transfered from Closely Related SWISS-PROT Entries ?

Annotation ?Function Description ?Confidence Level ?Reference Protein ?
Protein farnesyltransferase subunit beta Catalyzes the transfer of a farnesyl moiety from farnesyl pyrophosphate to a cysteine at the fourth position from the C-terminus of several proteins. The beta subunit is responsible for peptide-binding.probableP49355
Protein farnesyltransferase subunit beta Catalyzes the transfer of a farnesyl moiety from farnesyl pyrophosphate to a cysteine at the fourth position from the C-terminus of several proteins. The beta subunit is responsible for peptide-binding.probableQ38920

Prediction of Enzyme Commission Number ?

EC Number ?Description ?Confidence Level ?
2.-.-.-Transferases.probable
2.5.-.-Transferring alkyl or aryl groups, other than methyl groups.probable
2.5.1.-5,10-methenyltetrahydromethanopterin hydrogenase.probable
2.5.1.58Protein farnesyltransferase.probable

Spatial Structural Prediction

Structural Models Based on Templates

Template: 2H6F, chain B
Confidence level:very confident
Coverage over the Query: 2-292,319-320,340-360
View the alignment between query and template
View the model in PyMOL