Citrus Sinensis ID: 018026

Local Sequence Feature Prediction

Prediction and MethodResult
Residue Number Marker
Protein Sequence ?
Secondary Structure (Consensus) ?
Disordered Region (Consensus) ?
Transmembrane Helix (Consensus) ?
Signal Peptide (Consensus) ?
Coiled Coil (COILS) ?
 
--------10--------20--------30--------40--------50--------60--------70--------80--------90-------100-------110-------120-------130-------140-------150-------160-------170-------180-------190-------200-------210-------220-------230-------240-------250-------260-------270-------280-------290-------300-------310-------320-------330-------340-------350-------360--
MFNRFFLAAIAIAALVQSSTAQTRHVVGDALGWIVPPNGPATYSNWAANQTFTVGDTLVFNFAAGNHDVTRVTQSSFNACNTTSPLSRTTNSPASVTLTASGPHYFICSFPGHCLGGQKLAINVSARGSSPAPQPSSPAPQPSGSTPSPVPAPARTPTPAPAPAPEPATTPTPAPASAPTPTPRSAPTPAPTRQPATHVVGGALGWTVPPNASVGYQNWARNNNFSVGDILVFDYPARVHDVVEVTKAAYDSCNSSSTISKSTNPPTRITLGTAGEHYFFCTFPGHCSAGQKLAVNVTGGSSTAPSASPPSPTATPPSTTTNPPPQSPGGGTAPPPPNSSAKSLGAASLFTSFLVIVAGLLY
cHHHHHHHHHHHHHHHHHHccEEEEEEccccccccccccccccccccccccEEcccEEEEECccccccCEEEcHHHccccccccccccccccccEEEccccccEEEEcccccccccccEEEEEEccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccEEEEccccccccccccccccccccccccEEcccEEEEEccccccEEEEEcHHHHcccccccccccccccccEEEEcccccEEEEcccccccccccEEEEEEcccccccccccccccccccccccccccccccccccccccccccccccHHHHHHHHHHHHHHHHcc
**NRFFLAAIAIAALVQSSTAQTRHVVGDALGWIVPPNGPATYSNWAANQTFTVGDTLVFNFAAGNHDVTRVTQSSFNACNTTSPLSRTTNSPASVTLTASGPHYFICSFPGHCLGGQKLAINV**************************************************PASAPTPTPRSAPTPAPTRQPATHVVGGALGWTVPPNASVGYQNWARNNNFSVGDILVFDYPARVHDVVEVTKAAYDSCNSSSTISKSTNPPTRITLGTAGEHYFFCTFPGHCSAGQKLAVNV************************************************AASLFTSFLVIVAGLLY
xxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxHHHHHHHHHHHHHHHHHxx
SSSSSSSSSSSSSSSSSSSSSxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxx
MFNRFFLAAIAIAALVQSSTAQTRHVVGDALGWIVPPNGPATYSNWAANQTFTVGDTLVFNFAAGNHDVTRVTQSSFNACNTTSPLSRTTNSPASVTLTASGPHYFICSFPGHCLGGQKLAINVSARGSSPAPQPSSPAPQPSGSTPSPVPAPARTPTPAPAPAPEPATTPTPAPASAPTPTPRSAPTPAPTRQPATHVVGGALGWTVPPNASVGYQNWARNNNFSVGDILVFDYPARVHDVVEVTKAAYDSCNSSSTISKSTNPPTRITLGTAGEHYFFCTFPGHCSAGQKLAVNVTGGSSTAPSASPPSPTATPPSTTTNPPPQSPGGGTAPPPPNSSAKSLGAASLFTSFLVIVAGLLY

Function Prediction

Annotation transfered from Closely Related SWISS-PROT Entries ?

No confident close homologs for annotation transfering were detected in SWISSPROT

Prediction of Enzyme Commission Number ?

No confident prediction of EC number!

Spatial Structural Prediction

Structural Models Based on Templates

Template: 1JER, chain A
Confidence level:very confident
Coverage over the Query: 21-128
View the alignment between query and template
View the model in PyMOL
Template: 1JER, chain A
Confidence level:very confident
Coverage over the Query: 194-301
View the alignment between query and template
View the model in PyMOL
Template: 1M2V, chain B
Confidence level:probable
Coverage over the Query: 180-192
View the alignment between query and template
View the model in PyMOL

Templates for Structure Prediction

ID ?Alignment Graph ?Confidence Level ? View Alignment and Template ?
Query
1twf, chain Aprobable Alignment | Template Structure