Citrus Sinensis ID: 018030

Local Sequence Feature Prediction

Prediction and (Method)Result
Residue Number Marker
Protein Sequence ?
Secondary Structure (PSIPRED) ?
Secondary Structure Prediction (SSPRO) ?
Coil and Loop (DISEMBL) ?
Flexible Loop (DISEMBL) ?
Low Complexity Region (SEG) ?
Disordered region (IsUnstruct) ?
Disordered Region (DISOPRED) ?
Disordered Region (DISEMBL) ?
Disordered Region (DISPRO) ?
Transmembrane Helix (TMHMM) ?
Transmembrane Helix (HMMTOP) ?
Transmembrane Helix (MEMSAT) ?
TM Helix, Signal Peptide (MEMSAT_SVM) ?
TM Helix, Signal Peptide (Phobius) ?
Signal Peptide (SignalP HMM Mode) ?
Signal Peptide (SignalP NN Mode) ?
Coiled Coils (COILS) ?
Positional Conservation ?
 
--------10--------20--------30--------40--------50--------60--------70--------80--------90-------100-------110-------120-------130-------140-------150-------160-------170-------180-------190-------200-------210-------220-------230-------240-------250-------260-------270-------280-------290-------300-------310-------320-------330-------340-------350-------360--
MALLNQQLQRFLLTRLNYNFKPTVKNNFVNTTTARAKSQCYCSAIAIDAPSSLSGVAGIRWGSVSLQGLREEMEDGAVIQSDGLDGFSFAAVFDGHGGVSTVKFLRDELYKECVAALQGGLLLSGKDFDAIKKALQEAFENVDMKLLNRLEMNAEEDESGATATVMFIGRDILFISHVGDCCVVLSRTGKADVLTNPHRPYGSGQVSLQEIRRIREAGGWISNGRICGDIAVSRAFGDIRFKTKKNEMLKKGVNEGRWSEKFVSSIFCVRRVQLNKDLVIASPDIFQVSLGSDAEFVLLASDGLWDYMNSSDAVKFVRNQLQQHGDVQLACEALAQAALDQHSQDNISIVIADLGYASVELV
ccccHHHHHHHHHHHcccccccccccccccccccccccccccccccEEccccccccccEEEEEEcccccccccccEEEEEccccccEEEEEEEcccccHHHHHHHHHHHHHHHHHHHccccccccccHHHHHHHHHHHHHHHHHHHHHHHHccccccccccEEEEEEEEccEEEEEEcccccEEEEEccEEEEccccccccccccccHHHHHHHHHcccEEEccEEccccHHHHHcccHHHcccccHHccccccccccccccHHHHHHHcccccccccEEEcccEEEEEccccccEEEEEccccccccccHHHHHHHHHHHHccccHHHHHHHHHHHHHHcccccccEEEEEEccccccccc
ccccccccccccccccccccccccccccccccccccccccccccccEcccccccccccEEEEEEccccccccHHHHHEcccccccccEEEEEEccccHHHHHHHHHHHHHHHHHHcHHHccccccccHHHHHHHHHHHHHHHHHHHHHcccccccccccccEEEEEEEcccEEEEEEcccccEEEEEccEEEEccccccccccccccHHHHHHHHHcccEEEEccccccEEHHHHccccccccccccccccccccccccccccccEEEcccccccccEEcccccEEEEEcccccEEEEEEEcccHccccHHHHHHHHHHHHHccccHHHHHHHHHHHHHcccccccEEEEEEEEcccccccc
MALLNQQLQRFLLTRlnynfkptvknnfvnttTARAKSQCYCSAiaidapsslsgvagirwgSVSLQglreemedgaviqsdgldgfsfaavfdghggvstVKFLRDELYKECVAALQGGLLLSGKDFDAIKKALQEAFENVDMKLLNRLEMnaeedesgataTVMFIGRDILFISHVGDCCVVLsrtgkadvltnphrpygsgqvSLQEIRRIREAggwisngricgdiavsrafgdirfkTKKNEMLKKGvnegrwsekFVSSIFCVRRVQlnkdlviaspdifqvslgsdAEFVLLASDglwdymnsSDAVKFVRNQLQQHGDVQLACEALAQAALDQHSQDNISIVIADLGYASVELV
MALLNQQLQRFLLTrlnynfkptvknNFVNTTTARAKSQCYCSAIAIDAPSSLSGVAGIRWGSVSLQGLREEMEDGAVIQSDGLDGFSFAAVFDGHGGVSTVKFLRDELYKECVAALQGGLLLSGKDFDAIKKALQEAFENVDMKLLNRLEMNAEEDESGATATVMFIGRDILFISHVGDCCVVLSRTgkadvltnphrpygsgqvslQEIRRIREAggwisngricgdiavsrafgdirfktkknemlkkgvnegrwsekfVSSIFCVRRVQLNKDLVIASPDIFQVSLGSDAEFVLLASDGLWDYMNSSDAVKFVRNQLQQHGDVQLACEALAQAALDQHSQDNISIVIADLGYASVELV
MALLNQQLQRFLLTRLNYNFKPTVKNNFVNTTTARAKSQCYCSAIAIDAPSSLSGVAGIRWGSVSLQGLREEMEDGAVIQSDGLDGFSFAAVFDGHGGVSTVKFLRDELYKECVAALQGGLLLSGKDFDAIKKALQEAFENVDMKLLNRLEMNAEEDESGATATVMFIGRDILFISHVGDCCVVLSRTGKADVLTNPHRPYGSGQVSLQEIRRIREAGGWISNGRICGDIAVSRAFGDIRFKTKKNEMLKKGVNEGRWSEKFVSSIFCVRRVQLNKDLVIASPDIFQVSLGSDAEFVLLASDGLWDYMNSSDAVKFVRNQLQQHGDVqlacealaqaaldqHSQDNISIVIADLGYASVELV
******QLQRFLLTRLNYNFKPTVKNNFVNTTTARAKSQCYCSAIAIDAPSSLSGVAGIRWGSVSLQGLREEMEDGAVIQSDGLDGFSFAAVFDGHGGVSTVKFLRDELYKECVAALQGGLLLSGKDFDAIKKALQEAFENVDMKLLNRLE*********ATATVMFIGRDILFISHVGDCCVVLSRTGKADVLTNPHRPYGSGQVSLQEIRRIREAGGWISNGRICGDIAVSRAFGDIRFKTKKNEMLKKGVNEGRWSEKFVSSIFCVRRVQLNKDLVIASPDIFQVSLGSDAEFVLLASDGLWDYMNSSDAVKFVRNQLQQHGDVQLACEALAQAALDQHSQDNISIVIADLGYAS****
****************************************************LSGVAGIRWGSVSLQGLREEMEDGAVIQSDGLDGFSFAAVFDGHGGVSTVKFLRDELYKECVAALQGG****GKDFDAIKKALQEAFENVDMKLLNRLEMNAEEDESGATATVMFIGRDILFISHVGDCCVVLSRTGKADVLTNPHRPYGSGQVSLQEIRRIREAGGWISNGRICGDIAVSRAFGDIRFKTKKNEMLKKGVNEGRWSEKFVSSIFCVRRVQLNKDLVIASPDIFQVSLGSDAEFVLLASDGLWDYMNSSDAVKFVRNQLQQHGDVQLACEALAQAALDQHSQDNISIVIADLGYA*****
MALLNQQLQRFLLTRLNYNFKPTVKNNFVNTTTARAKSQCYCSAIAIDAPSSLSGVAGIRWGSVSLQGLREEMEDGAVIQSDGLDGFSFAAVFDGHGGVSTVKFLRDELYKECVAALQGGLLLSGKDFDAIKKALQEAFENVDMKLLNRLEMNAEEDESGATATVMFIGRDILFISHVGDCCVVLSRTGKADVLTNPHRPYGSGQVSLQEIRRIREAGGWISNGRICGDIAVSRAFGDIRFKTKKNEMLKKGVNEGRWSEKFVSSIFCVRRVQLNKDLVIASPDIFQVSLGSDAEFVLLASDGLWDYMNSSDAVKFVRNQLQQHGDVQLACEALAQAALDQHSQDNISIVIADLGYASVELV
********QRFLLTRLNYNFK*TVKNNF*NTTTARAKSQCYCSAIAIDAPSSLSGVAGIRWGSVSLQGLREEMEDGAVIQSDGLDGFSFAAVFDGHGGVSTVKFLRDELYKECVAALQGGLLLSGKDFDAIKKALQEAFENVDMKLLNRL*******ESGATATVMFIGRDILFISHVGDCCVVLSRTGKADVLTNPHRPYGSGQVSLQEIRRIREAGGWISNGRICGDIAVSRAFGDIRFKTKKN***********W*EKFVSSIFCVRRVQLNKDLVIASPDIFQVSLGSDAEFVLLASDGLWDYMNSSDAVKFVRNQLQQHGDVQLACEALAQAALDQHSQDNISIVIADLGYA*****
oooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooo
oooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooo
iiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiihhhhhhhhhhhhhhhhhhhhhhhhhooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooo
SSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiHHHHHHHHHHHHHHHHooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooo
oooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooo
xxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxx
xxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxx
MALLNQQLQRFLLTRLNYNFKPTVKNNFVNTTTARAKSQCYCSAIAIDAPSSLSGVAGIRWGSVSLQGLREEMEDGAVIQSDGLDGFSFAAVFDGHGGVSTVKFLRDELYKECVAALQGGLLLSGKDFDAIKKALQEAFENVDMKLLNRLEMNAEEDESGATATVMFIGRDILFISHVGDCCVVLSRTGKADVLTNPHRPYGSGQVSLQEIRRIREAGGWISNGRICGDIAVSRAFGDIRFKTKKNEMLKKGVNEGRWSEKFVSSIFCVRRVQLNKDLVIASPDIFQVSLGSDAEFVLLASDGLWDYMNSSDAVKFVRNQLQQHGDVQLACEALAQAALDQHSQDNISIVIADLGYASVELV
no confident homologs detected

Close Homologs for Annotation Transfer

Close Homologs in SWISS-PROT Database Detected by BLAST ?

Original result of BLAST against SWISS-PROT Database

ID ?Alignment graph ?Length ? Definition ? RBH(Q2H) ? RBH(H2Q) ? Q cover ? H cover ? Identity ? E-value ?
Query362 2.2.26 [Sep-21-2011]
P49599388 Protein phosphatase 2C 57 yes no 0.953 0.889 0.640 1e-130
Q5JKN1389 Probable protein phosphat yes no 0.803 0.748 0.635 1e-107
P36993390 Protein phosphatase 1B OS yes no 0.726 0.674 0.293 1e-29
Q69QZ0354 Probable protein phosphat no no 0.776 0.793 0.303 1e-29
O62830 484 Protein phosphatase 1B OS yes no 0.726 0.543 0.293 2e-29
P35815390 Protein phosphatase 1B OS yes no 0.726 0.674 0.297 3e-29
O75688 479 Protein phosphatase 1B OS no no 0.726 0.549 0.290 1e-28
Q5SMK6360 Probable protein phosphat no no 0.690 0.694 0.305 2e-28
Q8VZN9371 Probable protein phosphat no no 0.674 0.657 0.325 3e-28
P49596356 Probable protein phosphat yes no 0.687 0.699 0.310 3e-28
>sp|P49599|P2C57_ARATH Protein phosphatase 2C 57 OS=Arabidopsis thaliana GN=PPH1 PE=2 SV=2 Back     alignment and function desciption
 Score =  464 bits (1195), Expect = e-130,   Method: Compositional matrix adjust.
 Identities = 230/359 (64%), Positives = 278/359 (77%), Gaps = 14/359 (3%)

Query: 1   MALLNQQLQRFLLTRLNYNFKPTVKNN---FVNTTTARAKSQCYCSAIAIDAPSSLSGVA 57
           MALL   L RF    L ++  P+        V  T  R +    CSAIAIDAPSSL+GV 
Sbjct: 1   MALLRPHLHRFHSNTLRHSAYPSADAGGGLVVYPTYGRHR----CSAIAIDAPSSLTGVT 56

Query: 58  GIRWGSVSLQGLREEMEDGAVIQSDGLDGFSFAAVFDGHGGVSTVKFLRDELYKECVAAL 117
            IRWG  S+QG R+EMED  VI+SD +D FS+AAVFDGH G S+VKFLR+ELYKECV AL
Sbjct: 57  PIRWGYTSVQGFRDEMEDDIVIRSDAVDSFSYAAVFDGHAGSSSVKFLREELYKECVGAL 116

Query: 118 QGGLLLSGKDFDAIKKALQEAFENVDMKLLNRLEMNA-EEDESGATATVMFIGRDILFIS 176
           Q G LL+G DF AIK+AL +AFE+VD  LL  LE N  EEDESG+TATVM I  D+ FI+
Sbjct: 117 QAGSLLNGGDFAAIKEALIKAFESVDRNLLKWLEANGDEEDESGSTATVMIIRNDVSFIA 176

Query: 177 HVGDCCVVLSRTGKADVLTNPHRPYGSGQVSLQEIRRIREAGGWISNGRICGDIAVSRAF 236
           H+GD C VLSR+G+ + LT+ HRPYGS + ++QE++R++EAGGWI NGRICGDIAVSRAF
Sbjct: 177 HIGDSCAVLSRSGQIEELTDYHRPYGSSRAAIQEVKRVKEAGGWIVNGRICGDIAVSRAF 236

Query: 237 GDIRFKTKKNEMLKKGVNEGRWSEKFVSSIFCVRRVQLNKDLVIASPDIFQVSLGSDAEF 296
           GDIRFKTKKN+MLKKGV+EGRWSEKFVS      R++   D+V+A+PDIFQV L SD EF
Sbjct: 237 GDIRFKTKKNDMLKKGVDEGRWSEKFVS------RIEFKGDMVVATPDIFQVPLTSDVEF 290

Query: 297 VLLASDGLWDYMNSSDAVKFVRNQLQQHGDVQLACEALAQAALDQHSQDNISIVIADLG 355
           ++LASDGLWDYM SSD V +VR+QL++HG+VQLACE+LAQ ALD+ SQDNISI+IADLG
Sbjct: 291 IILASDGLWDYMKSSDVVSYVRDQLRKHGNVQLACESLAQVALDRRSQDNISIIIADLG 349

Arabidopsis thaliana (taxid: 3702)
EC: 3EC: .EC: 1EC: .EC: 3EC: .EC: 1EC: 6
>sp|Q5JKN1|P2C05_ORYSJ Probable protein phosphatase 2C 5 OS=Oryza sativa subsp. japonica GN=Os01g0552300 PE=2 SV=1 Back     alignment and function description
>sp|P36993|PPM1B_MOUSE Protein phosphatase 1B OS=Mus musculus GN=Ppm1b PE=2 SV=1 Back     alignment and function description
>sp|Q69QZ0|P2C27_ORYSJ Probable protein phosphatase 2C 27 OS=Oryza sativa subsp. japonica GN=Os02g0799000 PE=2 SV=1 Back     alignment and function description
>sp|O62830|PPM1B_BOVIN Protein phosphatase 1B OS=Bos taurus GN=PPM1B PE=2 SV=2 Back     alignment and function description
>sp|P35815|PPM1B_RAT Protein phosphatase 1B OS=Rattus norvegicus GN=Ppm1b PE=2 SV=1 Back     alignment and function description
>sp|O75688|PPM1B_HUMAN Protein phosphatase 1B OS=Homo sapiens GN=PPM1B PE=1 SV=1 Back     alignment and function description
>sp|Q5SMK6|P2C54_ORYSJ Probable protein phosphatase 2C 54 OS=Oryza sativa subsp. japonica GN=Os06g0179700 PE=2 SV=1 Back     alignment and function description
>sp|Q8VZN9|P2C11_ARATH Probable protein phosphatase 2C 11 OS=Arabidopsis thaliana GN=At1g43900 PE=2 SV=1 Back     alignment and function description
>sp|P49596|PP2C2_CAEEL Probable protein phosphatase 2C T23F11.1 OS=Caenorhabditis elegans GN=T23F11.1 PE=3 SV=2 Back     alignment and function description

Close Homologs in the Non-Redundant Database Detected by BLAST ?

Original result of BLAST against Nonredundant Database

GI ?Alignment Graph ?Length ? Definition ? Q cover ? H cover ? Identity ? E-value ?
Query362
255588292390 protein phosphatase, putative [Ricinus c 0.958 0.889 0.754 1e-155
302143922 505 unnamed protein product [Vitis vinifera] 0.950 0.681 0.731 1e-146
225455338386 PREDICTED: protein phosphatase 2C 57 [Vi 0.950 0.891 0.731 1e-145
3643090401 protein phosphatase-2C [Mesembryanthemum 0.964 0.870 0.692 1e-141
224135107384 predicted protein [Populus trichocarpa] 0.950 0.895 0.710 1e-140
449456991387 PREDICTED: protein phosphatase 2C 57-lik 0.950 0.888 0.711 1e-139
356509229386 PREDICTED: protein phosphatase 2C 57-lik 0.955 0.896 0.707 1e-135
356516081388 PREDICTED: protein phosphatase 2C 57-lik 0.955 0.891 0.694 1e-135
388500942390 unknown [Medicago truncatula] 0.966 0.897 0.643 1e-132
297799196386 hypothetical protein ARALYDRAFT_492004 [ 0.947 0.888 0.646 1e-128
>gi|255588292|ref|XP_002534559.1| protein phosphatase, putative [Ricinus communis] gi|223525033|gb|EEF27824.1| protein phosphatase, putative [Ricinus communis] Back     alignment and taxonomy information
 Score =  553 bits (1424), Expect = e-155,   Method: Compositional matrix adjust.
 Identities = 270/358 (75%), Positives = 306/358 (85%), Gaps = 11/358 (3%)

Query: 1   MALLNQQLQRFLLTRLNY---NFKPTVKNNFVNTTTARAKSQCYCSAIAIDAPSSLSGVA 57
           MAL + QL+RFLL++L+Y   NFK T   N  N    R  SQC  SAIAIDAPSSL+ VA
Sbjct: 1   MALFSPQLERFLLSKLHYGSSNFKTTSTKNLNNFVPVRPISQC--SAIAIDAPSSLTDVA 58

Query: 58  GIRWGSVSLQGLREEMEDGAVIQSDGLDGFSFAAVFDGHGGVSTVKFLRDELYKECVAAL 117
           G+RWGS SLQG REEMED  +++SDGLDG+SFA VFDGHGG+S+V+FLRDELYKECVAAL
Sbjct: 59  GVRWGSASLQGAREEMEDYIIVRSDGLDGYSFAGVFDGHGGISSVEFLRDELYKECVAAL 118

Query: 118 QGGLLLSGKDFDAIKKALQEAFENVDMKLLNRLEMNAEEDESGATATVMFIGRDILFISH 177
           QGGLLLSGKDF+A +KAL EAFENVD KLLN LE   EEDESG+TATVMFIG ++L +SH
Sbjct: 119 QGGLLLSGKDFNATRKALTEAFENVDKKLLNWLETIGEEDESGSTATVMFIGNNMLIVSH 178

Query: 178 VGDCCVVLSRTGKADVLTNPHRPYGSGQVSLQEIRRIREAGGWISNGRICGDIAVSRAFG 237
           +GD C+VLSR+GKA+VLT  HRPYGS +VSLQEI+RIREAGGWISNGRICGDIAVSRAFG
Sbjct: 179 IGDSCLVLSRSGKAEVLTESHRPYGSNKVSLQEIKRIREAGGWISNGRICGDIAVSRAFG 238

Query: 238 DIRFKTKKNEMLKKGVNEGRWSEKFVSSIFCVRRVQLNKDLVIASPDIFQVSLGSDAEFV 297
           DIRFKTKKNEML+KGV EGRWSEKF+S      RVQ N DL+ ASPD+FQV+LGSDAEF+
Sbjct: 239 DIRFKTKKNEMLQKGVKEGRWSEKFIS------RVQFNGDLMTASPDVFQVALGSDAEFI 292

Query: 298 LLASDGLWDYMNSSDAVKFVRNQLQQHGDVQLACEALAQAALDQHSQDNISIVIADLG 355
           +LASDGLWDYMNSSDAV FVRNQL+QHGDVQLACE LAQAALD  SQDN+SI+IADLG
Sbjct: 293 MLASDGLWDYMNSSDAVSFVRNQLRQHGDVQLACEELAQAALDLRSQDNVSIIIADLG 350

Source: Ricinus communis

Species: Ricinus communis

Genus: Ricinus

Family: Euphorbiaceae

Order: Malpighiales

Class:

Phylum: Streptophyta

Superkingdom: Eukaryota
>gi|302143922|emb|CBI23027.3| unnamed protein product [Vitis vinifera] Back     alignment and taxonomy information
>gi|225455338|ref|XP_002276645.1| PREDICTED: protein phosphatase 2C 57 [Vitis vinifera] Back     alignment and taxonomy information
>gi|3643090|gb|AAC36700.1| protein phosphatase-2C [Mesembryanthemum crystallinum] Back     alignment and taxonomy information
>gi|224135107|ref|XP_002321985.1| predicted protein [Populus trichocarpa] gi|222868981|gb|EEF06112.1| predicted protein [Populus trichocarpa] Back     alignment and taxonomy information
>gi|449456991|ref|XP_004146232.1| PREDICTED: protein phosphatase 2C 57-like [Cucumis sativus] gi|449517609|ref|XP_004165838.1| PREDICTED: protein phosphatase 2C 57-like [Cucumis sativus] Back     alignment and taxonomy information
>gi|356509229|ref|XP_003523353.1| PREDICTED: protein phosphatase 2C 57-like [Glycine max] Back     alignment and taxonomy information
>gi|356516081|ref|XP_003526725.1| PREDICTED: protein phosphatase 2C 57-like [Glycine max] Back     alignment and taxonomy information
>gi|388500942|gb|AFK38537.1| unknown [Medicago truncatula] Back     alignment and taxonomy information
>gi|297799196|ref|XP_002867482.1| hypothetical protein ARALYDRAFT_492004 [Arabidopsis lyrata subsp. lyrata] gi|297313318|gb|EFH43741.1| hypothetical protein ARALYDRAFT_492004 [Arabidopsis lyrata subsp. lyrata] Back     alignment and taxonomy information

Prediction of Gene Ontology (GO) Terms

Close Homologs with Gene Ontology terms Detected by BLAST ?

Original result of BLAST against Gene Ontology (AMIGO)

ID ? Alignment graph ? Length ? Definition ? Q cover ? H cover ? Identity ? E-value ?
Query362
TAIR|locus:2137400388 TAP38 "thylakoid-associated ph 0.953 0.889 0.610 5.5e-109
TAIR|locus:2029172371 AT1G43900 [Arabidopsis thalian 0.486 0.474 0.37 8.4e-31
RGD|1562091403 Ppm1n "protein phosphatase, Mg 0.488 0.439 0.338 6.3e-27
MGI|MGI:2142330404 Ppm1n "protein phosphatase, Mg 0.488 0.438 0.333 8.7e-26
UNIPROTKB|E1BVM8382 PPM1A "Uncharacterized protein 0.488 0.463 0.345 9.9e-26
TAIR|locus:2183695354 AT5G10740 [Arabidopsis thalian 0.488 0.5 0.33 2.1e-25
WB|WBGene00011953356 ppm-2 [Caenorhabditis elegans 0.461 0.469 0.333 1.8e-24
ZFIN|ZDB-GENE-040426-2731433 ppm1na "protein phosphatase, M 0.483 0.404 0.343 2e-24
UNIPROTKB|G3N3B3422 PPM1N "Uncharacterized protein 0.477 0.409 0.361 5.1e-24
TAIR|locus:2124784311 WIN2 "HOPW1-1-interacting 2" [ 0.486 0.565 0.311 7.9e-24
TAIR|locus:2137400 TAP38 "thylakoid-associated phosphatase 38" [Arabidopsis thaliana (taxid:3702)] Back     alignment and assigned GO terms
 Score = 1077 (384.2 bits), Expect = 5.5e-109, P = 5.5e-109
 Identities = 219/359 (61%), Positives = 265/359 (73%)

Query:     1 MALLNQQLQRFLLTRLNYNFKPTVKNN---FVNTTTARAKSQCYCSAIAIDAPSSLSGVA 57
             MALL   L RF    L ++  P+        V  T  R +    CSAIAIDAPSSL+GV 
Sbjct:     1 MALLRPHLHRFHSNTLRHSAYPSADAGGGLVVYPTYGRHR----CSAIAIDAPSSLTGVT 56

Query:    58 GIRWGSVSLQGLREEMEDGAVIQSDGLDGFSFAAVFDGHGGVSTVKFLRDELYKECVAAL 117
              IRWG  S+QG R+EMED  VI+SD +D FS+AAVFDGH G S+VKFLR+ELYKECV AL
Sbjct:    57 PIRWGYTSVQGFRDEMEDDIVIRSDAVDSFSYAAVFDGHAGSSSVKFLREELYKECVGAL 116

Query:   118 QGGLLLSGKDFDAIKKALQEAFENVDMKLLNRLEMNA-EEDESGATATVMFIGRDILFIS 176
             Q G LL+G DF AIK+AL +AFE+VD  LL  LE N  EEDESG+TATVM I  D+ FI+
Sbjct:   117 QAGSLLNGGDFAAIKEALIKAFESVDRNLLKWLEANGDEEDESGSTATVMIIRNDVSFIA 176

Query:   177 HVGDCCVVLSRTGKADVLTNPHRPYGSGQVSLQEIRRIREAGGWISNGRICGDIAVSRAF 236
             H+GD C VLSR+G+ + LT+ HRPYGS + ++QE++R++EAGGWI NGRICGDIAVSRAF
Sbjct:   177 HIGDSCAVLSRSGQIEELTDYHRPYGSSRAAIQEVKRVKEAGGWIVNGRICGDIAVSRAF 236

Query:   237 GDIRFKTKKNEMLKKGVNEGRWSEKFVSSIFCVRRVQLNKDLVIASPDIFQVSLGSDAEF 296
             GDIRFKTKKN+MLKKGV+EGRWSEKFVS      R++   D+V+A+PDIFQV L SD EF
Sbjct:   237 GDIRFKTKKNDMLKKGVDEGRWSEKFVS------RIEFKGDMVVATPDIFQVPLTSDVEF 290

Query:   297 VLLASDGLWDYMNSSDAVKFVRNQLQQHGDVXXXXXXXXXXXXXXHSQDNISIVIADLG 355
             ++LASDGLWDYM SSD V +VR+QL++HG+V               SQDNISI+IADLG
Sbjct:   291 IILASDGLWDYMKSSDVVSYVRDQLRKHGNVQLACESLAQVALDRRSQDNISIIIADLG 349
GO:0003824 "catalytic activity" evidence=IEA
GO:0004722 "protein serine/threonine phosphatase activity" evidence=IEA;ISS
GO:0006470 "protein dephosphorylation" evidence=IEA
GO:0008287 "protein serine/threonine phosphatase complex" evidence=IEA;ISS
GO:0005634 "nucleus" evidence=IDA
GO:0005730 "nucleolus" evidence=IDA
GO:0005737 "cytoplasm" evidence=IDA
GO:0009507 "chloroplast" evidence=IDA
GO:0009579 "thylakoid" evidence=IDA
GO:0009767 "photosynthetic electron transport chain" evidence=IMP
GO:0016791 "phosphatase activity" evidence=IDA
GO:0080005 "photosystem stoichiometry adjustment" evidence=IMP
GO:0009570 "chloroplast stroma" evidence=IDA
GO:0016311 "dephosphorylation" evidence=IMP
TAIR|locus:2029172 AT1G43900 [Arabidopsis thaliana (taxid:3702)] Back     alignment and assigned GO terms
RGD|1562091 Ppm1n "protein phosphatase, Mg2+/Mn2+ dependent, 1N" [Rattus norvegicus (taxid:10116)] Back     alignment and assigned GO terms
MGI|MGI:2142330 Ppm1n "protein phosphatase, Mg2+/Mn2+ dependent, 1N (putative)" [Mus musculus (taxid:10090)] Back     alignment and assigned GO terms
UNIPROTKB|E1BVM8 PPM1A "Uncharacterized protein" [Gallus gallus (taxid:9031)] Back     alignment and assigned GO terms
TAIR|locus:2183695 AT5G10740 [Arabidopsis thaliana (taxid:3702)] Back     alignment and assigned GO terms
WB|WBGene00011953 ppm-2 [Caenorhabditis elegans (taxid:6239)] Back     alignment and assigned GO terms
ZFIN|ZDB-GENE-040426-2731 ppm1na "protein phosphatase, Mg2+/Mn2+ dependent, 1Na (putative)" [Danio rerio (taxid:7955)] Back     alignment and assigned GO terms
UNIPROTKB|G3N3B3 PPM1N "Uncharacterized protein" [Bos taurus (taxid:9913)] Back     alignment and assigned GO terms
TAIR|locus:2124784 WIN2 "HOPW1-1-interacting 2" [Arabidopsis thaliana (taxid:3702)] Back     alignment and assigned GO terms

Prediction of Enzyme Commission (EC) Number

EC Number Prediction by Annotation Transfer from SWISS-PROT Entries ?

Original result of BLAST against SWISS-PROT

ID ?Name ?Annotated EC number ?Identity ?Query coverage ?Hit coverage ?RBH(Q2H) ?RBH(H2Q) ?
Q5JKN1P2C05_ORYSJ3, ., 1, ., 3, ., 1, 60.63540.80380.7480yesno
P49599P2C57_ARATH3, ., 1, ., 3, ., 1, 60.64060.95300.8891yesno

EC Number Prediction by Ezypred Server ?

Original result from Ezypred Server

Fail to connect to Ezypred Server

EC Number Prediction by EFICAz Software ?

Prediction LevelEC numberConfidence of Prediction
3rd Layer3.1.3.160.946
3rd Layer3.1.30.963

Prediction of Functionally Associated Proteins

Functionally Associated Proteins Detected by STRING ?

Original result from the STRING server

Fail to connect to STRING server

Conserved Domains and Related Protein Families

Conserved Domains Detected by RPS-BLAST ?

Original result of RPS-BLAST against CDD database part I

ID ?Alignment Graph ?Length ? Definition ? E-value ?
Query362
cd00143254 cd00143, PP2Cc, Serine/threonine phosphatases, fam 9e-68
smart00332252 smart00332, PP2Cc, Serine/threonine phosphatases, 7e-67
pfam00481252 pfam00481, PP2C, Protein phosphatase 2C 4e-51
PTZ00224 381 PTZ00224, PTZ00224, protein phosphatase 2C; Provis 2e-32
PLN03145365 PLN03145, PLN03145, Protein phosphatase 2c; Provis 3e-31
COG0631262 COG0631, PTC1, Serine/threonine protein phosphatas 7e-31
>gnl|CDD|238083 cd00143, PP2Cc, Serine/threonine phosphatases, family 2C, catalytic domain; The protein architecture and deduced catalytic mechanism of PP2C phosphatases are similar to the PP1, PP2A, PP2B family of protein Ser/Thr phosphatases, with which PP2C shares no sequence similarity Back     alignment and domain information 
 Score =  213 bits (544), Expect = 9e-68
 Identities = 100/297 (33%), Positives = 150/297 (50%), Gaps = 44/297 (14%)

Query: 59  IRWGSVSLQGLREEMEDGAVIQSD-GLDGFSFAAVFDGHGGVSTVKFLRDELYKECVAAL 117
              G     G R+  ED  VI+ +   +      VFDGHGG +  +F    L +E +  L
Sbjct: 1   FSAGVSDKGGDRKTNEDAVVIKPNLNNEDGGLFGVFDGHGGHAAGEFASKLLVEELLEEL 60

Query: 118 QGGLLLSGKDFDAIKKALQEAFENVDMKLLNRLEMNAEEDESGATATVMFIGRDILFISH 177
           +  L LS +D   I++AL++AF   D ++L   +   ++  SG TA V  I  + L++++
Sbjct: 61  EETLTLSEED---IEEALRKAFLRADEEILEEAQDEPDDARSGTTAVVALIRGNKLYVAN 117

Query: 178 VGDCCVVLSRTGKADVLTNPHRPYGSGQVSLQEIRRIREAGGWISNGRICGDIAVSRAFG 237
           VGD   VL R G+A  LT  H+P     V+ +E  RI +AGG +SNGR+ G +AV+RA G
Sbjct: 118 VGDSRAVLCRNGEAVQLTKDHKP-----VNEEERERIEKAGGRVSNGRVPGVLAVTRALG 172

Query: 238 DIRFKTKKNEMLKKGVNEGRWSEKFVSSIFCVRRVQLNKDLVIASPDIFQVSLGSDAEFV 297
           D   K                                    V A PD+  V L  D +F+
Sbjct: 173 DFDLKP----------------------------------GVSAEPDVTVVKLTEDDDFL 198

Query: 298 LLASDGLWDYMNSSDAVKFVRNQLQQHGDVQLACEALAQAALDQHSQDNISIVIADL 354
           +LASDGLWD +++ +AV  VR++L +  D+Q A + L   AL + S DNI++V+  L
Sbjct: 199 ILASDGLWDVLSNQEAVDIVRSELAKE-DLQEAAQELVDLALRRGSHDNITVVVVRL 254

Length = 254
>gnl|CDD|214625 smart00332, PP2Cc, Serine/threonine phosphatases, family 2C, catalytic domain Back     alignment and domain information
>gnl|CDD|215938 pfam00481, PP2C, Protein phosphatase 2C Back     alignment and domain information
>gnl|CDD|240318 PTZ00224, PTZ00224, protein phosphatase 2C; Provisional Back     alignment and domain information
>gnl|CDD|215603 PLN03145, PLN03145, Protein phosphatase 2c; Provisional Back     alignment and domain information
>gnl|CDD|223704 COG0631, PTC1, Serine/threonine protein phosphatase [Signal transduction mechanisms] Back     alignment and domain information

Conserved Domains Detected by HHsearch ?

Original result of HHsearch against CDD database

ID ?Alignment Graph ?Length ? Definition ? Probability ?
Query 362
PLN03145365 Protein phosphatase 2c; Provisional 100.0
KOG0697379 consensus Protein phosphatase 1B (formerly 2C) [Si 100.0
PTZ00224 381 protein phosphatase 2C; Provisional 100.0
KOG0698330 consensus Serine/threonine protein phosphatase [Si 100.0
PF00481254 PP2C: Protein phosphatase 2C; InterPro: IPR001932 100.0
KOG0699542 consensus Serine/threonine protein phosphatase [Si 100.0
COG0631262 PTC1 Serine/threonine protein phosphatase [Signal 100.0
KOG0700390 consensus Protein phosphatase 2C/pyruvate dehydrog 100.0
cd00143254 PP2Cc Serine/threonine phosphatases, family 2C, ca 100.0
smart00332255 PP2Cc Serine/threonine phosphatases, family 2C, ca 100.0
PRK14559645 putative protein serine/threonine phosphatase; Pro 100.0
KOG1323493 consensus Serine/threonine phosphatase [Signal tra 100.0
KOG1379330 consensus Serine/threonine protein phosphatase [Si 99.96
KOG0618 1081 consensus Serine/threonine phosphatase 2C containi 99.9
PF13672212 PP2C_2: Protein phosphatase 2C; PDB: 2JFT_A 2JFS_A 99.86
smart00331193 PP2C_SIG Sigma factor PP2C-like phosphatases. 99.77
TIGR02865764 spore_II_E stage II sporulation protein E. Stage I 99.63
PF07228193 SpoIIE: Stage II sporulation protein E (SpoIIE); I 99.55
COG2208367 RsbU Serine phosphatase RsbU, regulator of sigma s 98.41
PRK10693303 response regulator of RpoS; Provisional 81.13
>PLN03145 Protein phosphatase 2c; Provisional Back     alignment and domain information 
Probab=100.00  E-value=7.8e-52  Score=399.31  Aligned_cols=259  Identities=30%  Similarity=0.484  Sum_probs=225.1

Q ss_pred             CCeeEEEEeccCCCCCCCceEEEeeCC----------CCCeEEEEEEcCCCChhHHHHHHHHHHHHHHHHHhcCcccCCC
Q 018030           57 AGIRWGSVSLQGLREEMEDGAVIQSDG----------LDGFSFAAVFDGHGGVSTVKFLRDELYKECVAALQGGLLLSGK  126 (362)
Q Consensus        57 ~~~~~~~~s~~G~R~~nED~~~~~~~~----------~~~~~~~~V~DG~GG~~aa~~~~~~l~~~~~~~l~~~~~~~~~  126 (362)
                      ..++++..|.+|.|+.|||++++..+.          .....||||||||||+.+++|+++++.+.+.+..        .
T Consensus        63 ~~~~~~~~s~~G~R~~nED~~~~~~~~~~~~~~~~~~~~~~~lf~V~DGhGG~~age~as~~l~~~i~~~~--------~  134 (365)
T PLN03145         63 PVVRSGAWADIGSRSSMEDVYICVDNFMSDFGLKNSEDGPSAFYGVFDGHGGKHAADFACYHLPRFIVEDE--------D  134 (365)
T ss_pred             CceEEEEEccccCCCCCCCceEecccccccccccccCCCCceEEEEEeCCCCHHHHHHHHHHHHHHHHhhh--------c
Confidence            457889999999999999998875432          1235799999999999999999999999886531        1


Q ss_pred             ChhHHHHHHHHHHHHHHHHHHHHHhhccccCCCCceEEEEEeeCCEEEEEEeccccEEEEeCCceeeCCCCCcCCCCCCC
Q 018030          127 DFDAIKKALQEAFENVDMKLLNRLEMNAEEDESGATATVMFIGRDILFISHVGDCCVVLSRTGKADVLTNPHRPYGSGQV  206 (362)
Q Consensus       127 ~~~~~~~~L~~a~~~~~~~l~~~~~~~~~~~~~GsT~~~~~i~~~~l~~anvGDSr~~l~r~g~~~~lt~dH~~~~~~~~  206 (362)
                      ....++++|.++|.++|+.|....... ....+|||++++++.++++|+||+||||+|++|+|++++||.||++.+    
T Consensus       135 ~~~~~~~al~~af~~~d~~~~~~~~~~-~~~~~GTTavv~li~~~~l~vaNvGDSRayl~r~g~~~~LT~DH~~~~----  209 (365)
T PLN03145        135 FPREIEKVVSSAFLQTDTAFAEACSLD-ASLASGTTALAALVVGRSLVVANAGDCRAVLCRRGKAIEMSRDHKPMC----  209 (365)
T ss_pred             cchhHHHHHHHHHHHHhHHHHhhhccc-cCCCCcCcEEEEEEECCeEEEEecCCceEEEEcCCeEEEecCCCCCCC----
Confidence            234678899999999999987643322 334599999999999999999999999999999999999999999987    


Q ss_pred             CHhHHHHHHHcCCEEECCeeccccccccccCCcccccchhhhhhccCCCCcccccchhhhhhhhhcccCCCceEecceEE
Q 018030          207 SLQEIRRIREAGGWISNGRICGDIAVSRAFGDIRFKTKKNEMLKKGVNEGRWSEKFVSSIFCVRRVQLNKDLVIASPDIF  286 (362)
Q Consensus       207 ~~~E~~Ri~~~gg~i~~~rv~G~l~~tRalGd~~~k~~~n~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~p~i~  286 (362)
                       +.|++||+++||+|.++++.|.+.+||||||..+|..+.                           .....++++|++.
T Consensus       210 -~~E~~RI~~~Gg~v~~g~v~g~l~vTRalGD~~~k~~k~---------------------------~~~~~vs~ePdv~  261 (365)
T PLN03145        210 -SKERKRIEASGGYVYDGYLNGQLNVARALGDWHMEGMKG---------------------------SDGGPLSAEPELM  261 (365)
T ss_pred             -HHHHHHHHHcCCceecceECCcccccccccccccccccc---------------------------ccCCCcceEEEEE
Confidence             799999999999999999999999999999988763220                           1123467899999


Q ss_pred             EEEcCCCCeEEEEEcCCCcCCCChHHHHHHHHHHHHccCCHHHHHHHHHHHHHhcCCCCCeEEEEEEcCC
Q 018030          287 QVSLGSDAEFVLLASDGLWDYMNSSDAVKFVRNQLQQHGDVQLACEALAQAALDQHSQDNISIVIADLGY  356 (362)
Q Consensus       287 ~~~l~~~~d~lvL~SDGl~d~l~~~~i~~~v~~~l~~~~~~~~~a~~L~~~A~~~~~~DNiTvivv~l~~  356 (362)
                      .+++.++|+|||||||||||+|+++++++++++.+.+..+++.+|+.|+++|+++++.||||||||+|..
T Consensus       262 ~~~l~~~D~fLILaSDGLwdvls~ee~v~~i~~~l~~~~~p~~aa~~Lv~~Al~rgs~DNITvIVV~l~~  331 (365)
T PLN03145        262 TTQLTEEDEFLIIGCDGIWDVFRSQNAVDFARRRLQEHNDPVMCSKELVDEALKRKSGDNLAVVVVCFQS  331 (365)
T ss_pred             EEECCCCCEEEEEeCCccccCcCHHHHHHHHHHHHhcCCCHHHHHHHHHHHHHhCCCCCCEEEEEEEeec
Confidence            9999999899999999999999999999999988888889999999999999999999999999999986

>KOG0697 consensus Protein phosphatase 1B (formerly 2C) [Signal transduction mechanisms] Back     alignment and domain information
>PTZ00224 protein phosphatase 2C; Provisional Back     alignment and domain information
>KOG0698 consensus Serine/threonine protein phosphatase [Signal transduction mechanisms] Back     alignment and domain information
>PF00481 PP2C: Protein phosphatase 2C; InterPro: IPR001932 This domain is found in protein phosphatase 2C, as well as other proteins eg Back     alignment and domain information
>KOG0699 consensus Serine/threonine protein phosphatase [Signal transduction mechanisms] Back     alignment and domain information
>COG0631 PTC1 Serine/threonine protein phosphatase [Signal transduction mechanisms] Back     alignment and domain information
>KOG0700 consensus Protein phosphatase 2C/pyruvate dehydrogenase (lipoamide) phosphatase [Signal transduction mechanisms] Back     alignment and domain information
>cd00143 PP2Cc Serine/threonine phosphatases, family 2C, catalytic domain; The protein architecture and deduced catalytic mechanism of PP2C phosphatases are similar to the PP1, PP2A, PP2B family of protein Ser/Thr phosphatases, with which PP2C shares no sequence similarity Back     alignment and domain information
>smart00332 PP2Cc Serine/threonine phosphatases, family 2C, catalytic domain Back     alignment and domain information
>PRK14559 putative protein serine/threonine phosphatase; Provisional Back     alignment and domain information
>KOG1323 consensus Serine/threonine phosphatase [Signal transduction mechanisms] Back     alignment and domain information
>KOG1379 consensus Serine/threonine protein phosphatase [Signal transduction mechanisms] Back     alignment and domain information
>KOG0618 consensus Serine/threonine phosphatase 2C containing leucine-rich repeats, similar to SCN circadian oscillatory protein (SCOP) [Signal transduction mechanisms] Back     alignment and domain information
>PF13672 PP2C_2: Protein phosphatase 2C; PDB: 2JFT_A 2JFS_A 2V06_A 2JFR_A 2J86_A 2J82_A 2Y09_A 2XZV_A 2CM1_A 1TXO_B Back     alignment and domain information
>smart00331 PP2C_SIG Sigma factor PP2C-like phosphatases Back     alignment and domain information
>TIGR02865 spore_II_E stage II sporulation protein E Back     alignment and domain information
>PF07228 SpoIIE: Stage II sporulation protein E (SpoIIE); InterPro: IPR001932 This domain is found in protein phosphatase 2C, as well as other proteins eg Back     alignment and domain information
>COG2208 RsbU Serine phosphatase RsbU, regulator of sigma subunit [Signal transduction mechanisms / Transcription] Back     alignment and domain information
>PRK10693 response regulator of RpoS; Provisional Back     alignment and domain information

Homologous Structure Templates

Structure Templates Detected by BLAST ?

Original result of BLAST against Protein Data Bank

ID ?Alignment Graph ?Length ? Definition ? E-value ?
Query362
2p8e_A307 Crystal Structure Of The SerineTHREONINE PHOSPHATAS 7e-27
1a6q_A382 Crystal Structure Of The Protein SerineTHREONINE PH 8e-25
3fxj_A390 Crystal Structure Of Human Protein Phosphatase 1a ( 8e-25
2i0o_A304 Crystal Structure Of Anopheles Gambiae SerTHR PHOSP 2e-22
3nmv_B324 Crystal Structure Of Pyrabactin-Bound Abscisic Acid 1e-12
3ujg_B350 Crystal Structure Of Snrk2.6 In Complex With Hab1 L 2e-12
3nmn_B319 Crystal Structure Of Pyrabactin-Bound Abscisic Acid 2e-12
4ds8_B343 Complex Structure Of Abscisic Acid Receptor Pyl3-(+ 2e-12
3nmt_B341 Crystal Structure Of Pyrabactin Bound Abscisic Acid 2e-12
3kb3_B321 Crystal Structure Of Abscisic Acid-Bound Pyl2 In Co 2e-12
3qn1_B337 Crystal Structure Of The Pyr1 Abscisic Acid Recepto 2e-12
3jrq_A326 Crystal Structure Of (+)-aba-bound Pyl1 In Complex 2e-12
3kdj_B316 Complex Structure Of (+)-Aba-Bound Pyl1 And Abi1 Le 2e-12
3rt0_A340 Crystal Structure Of Pyl10-Hab1 Complex In The Abse 3e-12
2iq1_A274 Crystal Structure Of Human Ppm1k Length = 274 9e-11
4da1_A389 Crystal Structure Of Branched-Chain Alpha-Ketoacid 9e-11
3mq3_A467 Crystal Structure Of Native Bovine Pdp1c Length = 4 4e-08
2pnq_A467 Crystal Structure Of Pyruvate Dehydrogenase Phospha 1e-07
>pdb|2P8E|A Chain A, Crystal Structure Of The SerineTHREONINE PHOSPHATASE Domain Of Human Ppm1b Length = 307 Back     alignment and structure 
Iteration: 1

 Score =  117 bits (294), Expect = 7e-27,   Method: Compositional matrix adjust.
 Identities = 86/303 (28%), Positives = 141/303 (46%), Gaps = 40/303 (13%)
Query: 58  GIRWGSVSLQGLREEMEDG--AVIQ-SDGLDGFSFAAVFDGHGGVSTVKFLRDELYKECV 114
           G+R+G  S+QG R EMED   AV+    GL+ +SF AV+DGH G     +    L +   
Sbjct: 23  GLRYGLSSMQGWRVEMEDAHTAVVGIPHGLEDWSFFAVYDGHAGSRVANYCSTHLLEHIT 82
Query: 115 ------AALQGGLLLSGKDFDAIKKALQEAFENVDMKLLNRLEMNAEEDESGATATVMFI 168
                 AA + G  L     + +K  ++  F  +D  + N  ++    D SG+TA  + I
Sbjct: 83  TNEDFRAAGKSGSALE-LSVENVKNGIRTGFLKIDEYMRNFSDLRNGMDRSGSTAVGVMI 141
Query: 169 GRDILFISHVGDCCVVLSRTGKADVLTNPHRPYGSGQVSLQEIRRIREAGGWISNGRICG 228
               ++  + GD   VL R G+    T  H+P      + +E  RI+ AGG +   R+ G
Sbjct: 142 SPKHIYFINCGDSRAVLYRNGQVCFSTQDHKP-----CNPREKERIQNAGGSVMIQRVNG 196
Query: 229 DIAVSRAFGDIRFKTKKNEMLKKGVNEGRWSEKFVSSIFCVRRVQLNKDLVIASPDIFQV 288
            +AVSRA GD  +K                         CV      + LV   P+++++
Sbjct: 197 SLAVSRALGDYDYK-------------------------CVDGKGPTEQLVSPEPEVYEI 231
Query: 289 SLGSDAEFVLLASDGLWDYMNSSDAVKFVRNQLQQHGDVXXXXXXXXXXXXXXHSQDNIS 348
               + EF++LA DG+WD M++ +  ++V+++L+   D+               S+DN+S
Sbjct: 232 LRAEEDEFIILAXDGIWDVMSNEELCEYVKSRLEVSDDLENVCNWVVDTCLHKGSRDNMS 291
Query: 349 IVI 351
           IV+
Sbjct: 292 IVL 294
>pdb|1A6Q|A Chain A, Crystal Structure Of The Protein SerineTHREONINE PHOSPHATASE 2C AT 2 A Resolution Length = 382 Back     alignment and structure
>pdb|3FXJ|A Chain A, Crystal Structure Of Human Protein Phosphatase 1a (Ppm1a) Bound With Phosphate At 3 Mm Of Mn2+ Length = 390 Back     alignment and structure
>pdb|2I0O|A Chain A, Crystal Structure Of Anopheles Gambiae SerTHR PHOSPHATASE COMPLEXED With Zn2+ Length = 304 Back     alignment and structure
>pdb|3NMV|B Chain B, Crystal Structure Of Pyrabactin-Bound Abscisic Acid Receptor Pyl2 Mutant A93f In Complex With Type 2c Protein Phosphatase Abi2 Length = 324 Back     alignment and structure
>pdb|3UJG|B Chain B, Crystal Structure Of Snrk2.6 In Complex With Hab1 Length = 350 Back     alignment and structure
>pdb|3NMN|B Chain B, Crystal Structure Of Pyrabactin-Bound Abscisic Acid Receptor Pyl1 In Complex With Type 2c Protein Phosphatase Abi1 Length = 319 Back     alignment and structure
>pdb|4DS8|B Chain B, Complex Structure Of Abscisic Acid Receptor Pyl3-(+)-Aba-Hab1 In The Presence Of Mn2+ Length = 343 Back     alignment and structure
>pdb|3NMT|B Chain B, Crystal Structure Of Pyrabactin Bound Abscisic Acid Receptor Pyl2 Mutant A93f In Complex With Type 2c Protein Phosphatase Hab1 Length = 341 Back     alignment and structure
>pdb|3KB3|B Chain B, Crystal Structure Of Abscisic Acid-Bound Pyl2 In Complex With Hab1 Length = 321 Back     alignment and structure
>pdb|3QN1|B Chain B, Crystal Structure Of The Pyr1 Abscisic Acid Receptor In Complex With The Hab1 Type 2c Phosphatase Catalytic Domain Length = 337 Back     alignment and structure
>pdb|3JRQ|A Chain A, Crystal Structure Of (+)-aba-bound Pyl1 In Complex With Abi1 Length = 326 Back     alignment and structure
>pdb|3KDJ|B Chain B, Complex Structure Of (+)-Aba-Bound Pyl1 And Abi1 Length = 316 Back     alignment and structure
>pdb|3RT0|A Chain A, Crystal Structure Of Pyl10-Hab1 Complex In The Absence Of Abscisic Acid (Aba) Length = 340 Back     alignment and structure
>pdb|2IQ1|A Chain A, Crystal Structure Of Human Ppm1k Length = 274 Back     alignment and structure
>pdb|4DA1|A Chain A, Crystal Structure Of Branched-Chain Alpha-Ketoacid Dehydrogenase Phosphatase With Mg (Ii) Ions At The Active Site Length = 389 Back     alignment and structure
>pdb|3MQ3|A Chain A, Crystal Structure Of Native Bovine Pdp1c Length = 467 Back     alignment and structure
>pdb|2PNQ|A Chain A, Crystal Structure Of Pyruvate Dehydrogenase Phosphatase 1 (Pdp1) Length = 467 Back     alignment and structure

Structure Templates Detected by RPS-BLAST ?

Original result of RPS-BLAST against PDB70 database

ID ?Alignment Graph ?Length ? Definition ? E-value ?
Query362
1a6q_A382 Phosphatase 2C; catalytic mechanism, metalloenzyme 3e-93
2p8e_A307 PPM1B beta isoform variant 6; structural genomics, 1e-92
2i44_A324 Serine-threonine phosphatase 2C; PSI-2, 8817Z, str 3e-82
2i0o_A304 Ser/Thr phosphatase; beta sandwich, structural gen 6e-78
2iq1_A274 Protein phosphatase 2C kappa, PPM1K; structural ge 1e-70
4da1_A389 Protein phosphatase 1K, mitochondrial; metal-ION-a 5e-70
3kdj_B316 Protein phosphatase 2C 56; ABA, PYL1, abscisic aci 6e-69
3qn1_B337 Protein phosphatase 2C 16; start domain, BET V dom 2e-63
3d8k_A377 PP2C, protein phosphatase 2C; nysgrc, PSI-II, STR 4e-54
2irm_A358 Mitogen-activated protein kinase kinase kinase 7 i 1e-48
2isn_A364 NYSGXRC-8828Z, phosphatase; pathogenic strain, pra 3e-48
2j4o_A401 Mitogen-activated protein kinase kinase kinase 7-i 2e-45
2pnq_A467 [pyruvate dehydrogenase [lipoamide]]-phosphatase 1 6e-40
2pk0_A250 Serine/threonine protein phosphatase STP1; SI moti 2e-08
2pk0_A250 Serine/threonine protein phosphatase STP1; SI moti 1e-05
2jfr_A234 Ser-Thr phosphatase MSPP; hydrolase, PPM phosphata 1e-07
2j82_A240 TPPHA, protein serine-threonine phosphatase; PP2C 2e-07
1txo_A237 Putative bacterial enzyme; serine/threonine protei 4e-07
1txo_A237 Putative bacterial enzyme; serine/threonine protei 4e-04
3rnr_A211 Stage II sporulation E family protein; structural 2e-05
>1a6q_A Phosphatase 2C; catalytic mechanism, metalloenzyme, transductuin, hydrolase; 2.00A {Homo sapiens} SCOP: a.159.1.1 d.219.1.1 PDB: 3fxk_A 3fxj_A 3fxl_A* 3fxm_A* 3fxo_A Length = 382 Back     alignment and structure
 Score =  282 bits (723), Expect = 3e-93
 Identities = 80/308 (25%), Positives = 130/308 (42%), Gaps = 34/308 (11%)

Query: 51  SSLSGVAGIRWGSVSLQGLREEMEDGAVIQ---SDGLDGFSFAAVFDGHGGVSTVKFLRD 107
           ++     G+R+G  S+QG R EMED          GL+ +SF AV+DGH G    K+  +
Sbjct: 14  NAQGQGNGLRYGLSSMQGWRVEMEDAHTAVIGLPSGLESWSFFAVYDGHAGSQVAKYCCE 73

Query: 108 ELYKECVAALQGGLLLSGKDFDAIKKALQEAFENVDMKLLNRLEMNAEEDESGATATVMF 167
            L                   + +K  ++  F  +D  +    E     D SG+TA  + 
Sbjct: 74  HLLDHITNNQDFKGSAGAPSVENVKNGIRTGFLEIDEHMRVMSEKKHGADRSGSTAVGVL 133

Query: 168 IGRDILFISHVGDCCVVLSRTGKADVLTNPHRPYGSGQVSLQEIRRIREAGGWISNGRIC 227
           I     +  + GD   +L R  K    T  H+P         E  RI+ AGG +   R+ 
Sbjct: 134 ISPQHTYFINCGDSRGLLCRNRKVHFFTQDHKPSNPL-----EKERIQNAGGSVMIQRVN 188

Query: 228 GDIAVSRAFGDIRFKTKKNEMLKKGVNEGRWSEKFVSSIFCVRRVQLNKDLVIASPDIFQ 287
           G +AVSRA GD  +K    +                            + LV   P++  
Sbjct: 189 GSLAVSRALGDFDYKCVHGKGPT-------------------------EQLVSPEPEVHD 223

Query: 288 VSL-GSDAEFVLLASDGLWDYMNSSDAVKFVRNQLQQHGDVQLACEALAQAALDQHSQDN 346
           +     D +F++LA DG+WD M + +   FVR++L+   D++  C  +    L + S+DN
Sbjct: 224 IERSEEDDQFIILACDGIWDVMGNEELCDFVRSRLEVTDDLEKVCNEVVDTCLYKGSRDN 283

Query: 347 ISIVIADL 354
           +S+++   
Sbjct: 284 MSVILICF 291
>2p8e_A PPM1B beta isoform variant 6; structural genomics, hydrolase, PSI-2, protein structure initiative; 1.82A {Homo sapiens} Length = 307 Back     alignment and structure
>2i44_A Serine-threonine phosphatase 2C; PSI-2, 8817Z, structural genomics, protein structure initiative; 2.04A {Toxoplasma gondii} Length = 324 Back     alignment and structure
>2i0o_A Ser/Thr phosphatase; beta sandwich, structural genomics, PSI, protei structure initiative, NEW YORK SGX research center for STRU genomics; 1.70A {Anopheles gambiae} Length = 304 Back     alignment and structure
>2iq1_A Protein phosphatase 2C kappa, PPM1K; structural genomics, PSI-2, protein structure initiative, NEW YORK SGX research center for structural genomics; 2.25A {Homo sapiens} Length = 274 Back     alignment and structure
>4da1_A Protein phosphatase 1K, mitochondrial; metal-ION-assisted catalysis, dehydrogenase phosphatase, hydrolase; 2.38A {Homo sapiens} PDB: 3qht_A 1l2n_A Length = 389 Back     alignment and structure
>3kdj_B Protein phosphatase 2C 56; ABA, PYL1, abscisic acid signaling pathway, cell membr hydrolase, magnesium, manganese, metal-binding, nucleus; HET: A8S; 1.88A {Arabidopsis thaliana} PDB: 3nmn_B* 3jrq_A* 3ujk_A 3nmv_B 3ujl_B* Length = 316 Back     alignment and structure
>3qn1_B Protein phosphatase 2C 16; start domain, BET V domain, PYR/PYL/RCAR, PP2C, abscisic ACI receptor, type 2C protein phosphatase; HET: A8S; 1.80A {Arabidopsis thaliana} PDB: 3ujg_B 3nmt_B* 3rt0_A 3kb3_B* Length = 337 Back     alignment and structure
>3d8k_A PP2C, protein phosphatase 2C; nysgrc, PSI-II, STR genomics, protein structure initiative, NEW YORK structural research consortium, nysgxrc; 2.71A {Toxoplasma gondii} Length = 377 Back     alignment and structure
>2irm_A Mitogen-activated protein kinase kinase kinase 7 interacting protein 1; TAK1-binding protein, TAB1; 3.00A {Anopheles gambiae} Length = 358 Back     alignment and structure
>2isn_A NYSGXRC-8828Z, phosphatase; pathogenic strain, praseodymium, sulfate structural genomics, PSI-2, protein structure initiative; 1.90A {Toxoplasma gondii} Length = 364 Back     alignment and structure
>2j4o_A Mitogen-activated protein kinase kinase kinase 7-interacting protein 1; TGF-beta, pseudo-phosphatase, TAK1 binding protein, protein binding; 2.25A {Homo sapiens} PDB: 2pom_A 2pop_A Length = 401 Back     alignment and structure
>2pnq_A [pyruvate dehydrogenase [lipoamide]]-phosphatase 1; pyruvate dehydrogenase phosphatase 1, catalytic subunit, PDP1C, hydrolase; 1.81A {Rattus norvegicus} PDB: 3n3c_A 3mq3_A Length = 467 Back     alignment and structure
>2pk0_A Serine/threonine protein phosphatase STP1; SI motif, signaling protein; 2.65A {Streptococcus agalactiae} Length = 250 Back     alignment and structure
>2pk0_A Serine/threonine protein phosphatase STP1; SI motif, signaling protein; 2.65A {Streptococcus agalactiae} Length = 250 Back     alignment and structure
>2jfr_A Ser-Thr phosphatase MSPP; hydrolase, PPM phosphatase, manganese, phosphate; 0.83A {Mycobacterium smegmatis} PDB: 2jfs_A 2jft_A 2v06_A Length = 234 Back     alignment and structure
>2j82_A TPPHA, protein serine-threonine phosphatase; PP2C family phosphatase, hydrolase; 1.28A {Synechococcus elongatus} PDB: 2j86_A 2y09_A 2xzv_A Length = 240 Back     alignment and structure
>1txo_A Putative bacterial enzyme; serine/threonine protein phosphatases, PSTP/PPP, structural genomics, PSI, protein structure initiative; 1.95A {Mycobacterium tuberculosis} SCOP: d.219.1.1 PDB: 2cm1_A Length = 237 Back     alignment and structure
>1txo_A Putative bacterial enzyme; serine/threonine protein phosphatases, PSTP/PPP, structural genomics, PSI, protein structure initiative; 1.95A {Mycobacterium tuberculosis} SCOP: d.219.1.1 PDB: 2cm1_A Length = 237 Back     alignment and structure
>3rnr_A Stage II sporulation E family protein; structural genomics, PSI-biology, midwest center for structu genomics, MCSG; HET: MSE; 2.00A {Thermanaerovibrio acidaminovorans} Length = 211 Back     alignment and structure

Structure Templates Detected by HHsearch ?

Original result of HHsearch against PDB70 database

ID ?Alignment Graph ?Length ? Definition ? Probability ?
Query362
2p8e_A307 PPM1B beta isoform variant 6; structural genomics, 100.0
1a6q_A382 Phosphatase 2C; catalytic mechanism, metalloenzyme 100.0
2i0o_A304 Ser/Thr phosphatase; beta sandwich, structural gen 100.0
3qn1_B337 Protein phosphatase 2C 16; start domain, BET V dom 100.0
2iq1_A274 Protein phosphatase 2C kappa, PPM1K; structural ge 100.0
2i44_A324 Serine-threonine phosphatase 2C; PSI-2, 8817Z, str 100.0
3kdj_B316 Protein phosphatase 2C 56; ABA, PYL1, abscisic aci 100.0
2irm_A358 Mitogen-activated protein kinase kinase kinase 7 i 100.0
2j4o_A401 Mitogen-activated protein kinase kinase kinase 7-i 100.0
2isn_A364 NYSGXRC-8828Z, phosphatase; pathogenic strain, pra 100.0
4da1_A389 Protein phosphatase 1K, mitochondrial; metal-ION-a 100.0
3d8k_A377 PP2C, protein phosphatase 2C; nysgrc, PSI-II, STR 100.0
2pnq_A467 [pyruvate dehydrogenase [lipoamide]]-phosphatase 1 100.0
2pk0_A250 Serine/threonine protein phosphatase STP1; SI moti 100.0
1txo_A237 Putative bacterial enzyme; serine/threonine protei 100.0
2j82_A240 TPPHA, protein serine-threonine phosphatase; PP2C 100.0
2jfr_A234 Ser-Thr phosphatase MSPP; hydrolase, PPM phosphata 100.0
3rnr_A211 Stage II sporulation E family protein; structural 100.0
3t91_A242 Stage II sporulation protein E; SPOIIE, phosphatas 99.87
3pu9_A242 Protein serine/threonine phosphatase; PSI-biology, 99.85
3f79_A255 Probable two-component response regulator; adaptor 99.77
3zt9_A193 Serine phosphatase; hydrolase, signal transduction 99.74
3ke6_A 399 Protein RV1364C/MT1410; anti-sigma factor, anti-si 99.33
3eq2_A394 Probable two-component response regulator; adaptor 98.66
>2p8e_A PPM1B beta isoform variant 6; structural genomics, hydrolase, PSI-2, protein structure initiative; 1.82A {Homo sapiens} Back     alignment and structure
Probab=100.00  E-value=8.4e-53  Score=399.73  Aligned_cols=272  Identities=29%  Similarity=0.511  Sum_probs=228.1

Q ss_pred             CCeeEEEEeccCCCCCCCceEEEeeCCC---CCeEEEEEEcCCCChhHHHHHHHHHHHHHHHH--HhcCc---ccCCCCh
Q 018030           57 AGIRWGSVSLQGLREEMEDGAVIQSDGL---DGFSFAAVFDGHGGVSTVKFLRDELYKECVAA--LQGGL---LLSGKDF  128 (362)
Q Consensus        57 ~~~~~~~~s~~G~R~~nED~~~~~~~~~---~~~~~~~V~DG~GG~~aa~~~~~~l~~~~~~~--l~~~~---~~~~~~~  128 (362)
                      ..+.++..+.+|+|+.|||++++.....   +++.+|+|||||||+.+++++++.+.+.+.+.  +....   .......
T Consensus        22 ~~~~~~~~s~~G~R~~nED~~~~~~~~~~~~~~~~l~~V~DGhGG~~~a~~as~~~~~~l~~~~~~~~~~~~~~~~~~~~  101 (307)
T 2p8e_A           22 NGLRYGLSSMQGWRVEMEDAHTAVVGIPHGLEDWSFFAVYDGHAGSRVANYCSTHLLEHITTNEDFRAAGKSGSALELSV  101 (307)
T ss_dssp             TTEEEEEEEEEETSSSCCEEEEEEEEETTTEEEEEEEEEEEEESCSHHHHHHHHHHHHHHHTSTTTC-----------CH
T ss_pred             CCeeEEEEecCCCCCcccceEEEEecCCCCCCCeEEEEEECCCCCHHHHHHHHHHHHHHHHhhHhhhhcccccccccccH
Confidence            6899999999999999999998865422   35689999999999999999999999987642  11100   0011235


Q ss_pred             hHHHHHHHHHHHHHHHHHHHHHhhccccCCCCceEEEEEeeCCEEEEEEeccccEEEEeCCceeeCCCCCcCCCCCCCCH
Q 018030          129 DAIKKALQEAFENVDMKLLNRLEMNAEEDESGATATVMFIGRDILFISHVGDCCVVLSRTGKADVLTNPHRPYGSGQVSL  208 (362)
Q Consensus       129 ~~~~~~L~~a~~~~~~~l~~~~~~~~~~~~~GsT~~~~~i~~~~l~~anvGDSr~~l~r~g~~~~lt~dH~~~~~~~~~~  208 (362)
                      ..+.++|.++|..+|+.|.+..+.......+|||++++++.++++|+|||||||+|++|+|++.+||.||++.+     +
T Consensus       102 ~~~~~~l~~a~~~~~~~i~~~~~~~~~~~~~GtT~~~~~i~~~~l~vanvGDSRa~l~r~g~~~~lT~DH~~~~-----~  176 (307)
T 2p8e_A          102 ENVKNGIRTGFLKIDEYMRNFSDLRNGMDRSGSTAVGVMISPKHIYFINCGDSRAVLYRNGQVCFSTQDHKPCN-----P  176 (307)
T ss_dssp             HHHHHHHHHHHHHHHHHHHTSTTTC---CCCEECEEEEEECSSEEEEEEESSCEEEEEETTEEEEECCCCCTTS-----H
T ss_pred             HHHHHHHHHHHHHHHHHHHhhhhhccCCCCCCCeEEEEEEECCcEEEEEccCcEEEEEECCccccCCCCCCCCC-----H
Confidence            67899999999999999987544444456799999999999999999999999999999999999999999987     8


Q ss_pred             hHHHHHHHcCCEEECCeeccccccccccCCcccccchhhhhhccCCCCcccccchhhhhhhhhcccCCCceEecceEEEE
Q 018030          209 QEIRRIREAGGWISNGRICGDIAVSRAFGDIRFKTKKNEMLKKGVNEGRWSEKFVSSIFCVRRVQLNKDLVIASPDIFQV  288 (362)
Q Consensus       209 ~E~~Ri~~~gg~i~~~rv~G~l~~tRalGd~~~k~~~n~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~p~i~~~  288 (362)
                      .|+.||..+||.|..+|++|.+.+||||||..+|...                         ..++.+++|+++|++..+
T Consensus       177 ~E~~rI~~~gg~v~~~rv~g~l~ltRalGd~~~k~~~-------------------------~~~~~~~~v~~~pdv~~~  231 (307)
T 2p8e_A          177 REKERIQNAGGSVMIQRVNGSLAVSRALGDYDYKCVD-------------------------GKGPTEQLVSPEPEVYEI  231 (307)
T ss_dssp             HHHHHHHHTTCCEETTEETTTBSCSBCEECGGGSCCT-------------------------TCCGGGSSSBCCCEEEEE
T ss_pred             HHHHHHHHcCCEEEeCcccCeEeccccccCHHHhcCc-------------------------ccCCCCCeEeccCeEEEE
Confidence            9999999999999999999999999999999988533                         122335678899999999


Q ss_pred             EcCCCCeEEEEEcCCCcCCCChHHHHHHHHHHHHccCCHHHHHHHHHHHHHhcCCCCCeEEEEEEcCCCc
Q 018030          289 SLGSDAEFVLLASDGLWDYMNSSDAVKFVRNQLQQHGDVQLACEALAQAALDQHSQDNISIVIADLGYAS  358 (362)
Q Consensus       289 ~l~~~~d~lvL~SDGl~d~l~~~~i~~~v~~~l~~~~~~~~~a~~L~~~A~~~~~~DNiTvivv~l~~~~  358 (362)
                      ++.++|+|||||||||||+++++++++++...+....+++.+|+.|++.|+++|+.|||||||+++....
T Consensus       232 ~l~~~d~~llL~SDGl~d~ls~~ei~~~v~~~~~~~~~~~~~a~~Lv~~A~~~g~~DNiTvivv~~~~~~  301 (307)
T 2p8e_A          232 LRAEEDEFIILACDGIWDVMSNEELCEYVKSRLEVSDDLENVCNWVVDTCLHKGSRDNMSIVLVCFSNEG  301 (307)
T ss_dssp             ECCTTEEEEEEECHHHHTTSCHHHHHHHHHHHHTTCCCHHHHHHHHHHHHHHTTCCSCEEEEEEEC----
T ss_pred             EcCCCCeEEEEECCCcccCCCHHHHHHHHHHHHhcCCCHHHHHHHHHHHHHHcCCCCCeEEEEEECCCCC
Confidence            9999967999999999999999999999987766678999999999999999999999999999998653
>1a6q_A Phosphatase 2C; catalytic mechanism, metalloenzyme, transductuin, hydrolase; 2.00A {Homo sapiens} SCOP: a.159.1.1 d.219.1.1 PDB: 3fxk_A 3fxj_A 3fxl_A* 3fxm_A* 3fxo_A Back     alignment and structure
>2i0o_A Ser/Thr phosphatase; beta sandwich, structural genomics, PSI, protei structure initiative, NEW YORK SGX research center for STRU genomics; 1.70A {Anopheles gambiae} Back     alignment and structure
>3qn1_B Protein phosphatase 2C 16; start domain, BET V domain, PYR/PYL/RCAR, PP2C, abscisic ACI receptor, type 2C protein phosphatase; HET: A8S; 1.80A {Arabidopsis thaliana} PDB: 3zvu_B* 3ujg_B 3nmt_B* 4ds8_B* 3rt0_A 3kb3_B* Back     alignment and structure
>2iq1_A Protein phosphatase 2C kappa, PPM1K; structural genomics, PSI-2, protein structure initiative, NEW YORK SGX research center for structural genomics; 2.25A {Homo sapiens} Back     alignment and structure
>2i44_A Serine-threonine phosphatase 2C; PSI-2, 8817Z, structural genomics, protein structure initiative; 2.04A {Toxoplasma gondii} Back     alignment and structure
>3kdj_B Protein phosphatase 2C 56; ABA, PYL1, abscisic acid signaling pathway, cell membr hydrolase, magnesium, manganese, metal-binding, nucleus; HET: A8S; 1.88A {Arabidopsis thaliana} PDB: 3nmn_B* 3jrq_A* 3ujk_A 3nmv_B 3ujl_B* Back     alignment and structure
>2irm_A Mitogen-activated protein kinase kinase kinase 7 interacting protein 1; TAK1-binding protein, TAB1; 3.00A {Anopheles gambiae} Back     alignment and structure
>2j4o_A Mitogen-activated protein kinase kinase kinase 7-interacting protein 1; TGF-beta, pseudo-phosphatase, TAK1 binding protein, protein binding; 2.25A {Homo sapiens} PDB: 2pom_A 2pop_A Back     alignment and structure
>2isn_A NYSGXRC-8828Z, phosphatase; pathogenic strain, praseodymium, sulfate structural genomics, PSI-2, protein structure initiative; 1.90A {Toxoplasma gondii} Back     alignment and structure
>4da1_A Protein phosphatase 1K, mitochondrial; metal-ION-assisted catalysis, dehydrogenase phosphatase, hydrolase; 2.38A {Homo sapiens} PDB: 3qht_A 1l2n_A Back     alignment and structure
>3d8k_A PP2C, protein phosphatase 2C; nysgrc, PSI-II, STR genomics, protein structure initiative, NEW YORK structural research consortium, nysgxrc; 2.71A {Toxoplasma gondii} Back     alignment and structure
>2pnq_A [pyruvate dehydrogenase [lipoamide]]-phosphatase 1; pyruvate dehydrogenase phosphatase 1, catalytic subunit, PDP1C, hydrolase; 1.81A {Rattus norvegicus} PDB: 3n3c_A 3mq3_A Back     alignment and structure
>2pk0_A Serine/threonine protein phosphatase STP1; SI motif, signaling protein; 2.65A {Streptococcus agalactiae} Back     alignment and structure
>1txo_A Putative bacterial enzyme; serine/threonine protein phosphatases, PSTP/PPP, structural genomics, PSI, protein structure initiative; 1.95A {Mycobacterium tuberculosis} SCOP: d.219.1.1 PDB: 2cm1_A Back     alignment and structure
>2j82_A TPPHA, protein serine-threonine phosphatase; PP2C family phosphatase, hydrolase; 1.28A {Synechococcus elongatus} PDB: 2j86_A 2y09_A 2xzv_A Back     alignment and structure
>2jfr_A Ser-Thr phosphatase MSPP; hydrolase, PPM phosphatase, manganese, phosphate; 0.83A {Mycobacterium smegmatis} PDB: 2jfs_A 2jft_A 2v06_A Back     alignment and structure
>3rnr_A Stage II sporulation E family protein; structural genomics, PSI-biology, midwest center for structu genomics, MCSG; HET: MSE; 2.00A {Thermanaerovibrio acidaminovorans} Back     alignment and structure
>3t91_A Stage II sporulation protein E; SPOIIE, phosphatase, manganese binding, PP2C PH domain; HET: GL0 MAN; 2.64A {Bacillus subtilis} PDB: 3t9q_A* Back     alignment and structure
>3pu9_A Protein serine/threonine phosphatase; PSI-biology, MCSG, structural genomics; HET: MSE; 1.55A {Sphaerobacter thermophilus} Back     alignment and structure
>3f79_A Probable two-component response regulator; adaptor, signaling protein; 2.80A {Pseudomonas aeruginosa} PDB: 3es2_A Back     alignment and structure
>3zt9_A Serine phosphatase; hydrolase, signal transduction, protein protein interaction,; HET: PEG; 1.75A {Moorella thermoacetica} Back     alignment and structure
>3ke6_A Protein RV1364C/MT1410; anti-sigma factor, anti-sigma factor antagonist, phosphatase serine kinase, ATPase, unknown function; 2.60A {Mycobacterium tuberculosis} Back     alignment and structure
>3eq2_A Probable two-component response regulator; adaptor sigmas, signaling protein; 3.40A {Pseudomonas aeruginosa} PDB: 3f7a_A Back     alignment and structure

Homologous Structure Domains

Structure Domains Detected by RPS-BLAST ?

Original result of RPS-BLAST against SCOP70(version1.75) database

ID ?Alignment Graph ?Length ? Definition ? E-value ?
Query 362
d1a6qa2295 d.219.1.1 (A:2-296) Protein serine/threonine phosp 2e-51
d1txoa_235 d.219.1.1 (A:) putative serine/threonine phosphata 6e-22
>d1a6qa2 d.219.1.1 (A:2-296) Protein serine/threonine phosphatase 2C, catalytic domain {Human (Homo sapiens) [TaxId: 9606]} Length = 295 Back     information, alignment and structure

class: Alpha and beta proteins (a+b)
fold: PP2C-like
superfamily: PP2C-like
family: PP2C-like
domain: Protein serine/threonine phosphatase 2C, catalytic domain
species: Human (Homo sapiens) [TaxId: 9606]

 Score =  170 bits (432), Expect = 2e-51
 Identities = 81/308 (26%), Positives = 132/308 (42%), Gaps = 34/308 (11%)

Query: 51  SSLSGVAGIRWGSVSLQGLREEMEDGAVIQSD---GLDGFSFAAVFDGHGGVSTVKFLRD 107
           ++     G+R+G  S+QG R EMED          GL+ +SF AV+DGH G    K+  +
Sbjct: 13  NAQGQGNGLRYGLSSMQGWRVEMEDAHTAVIGLPSGLESWSFFAVYDGHAGSQVAKYCCE 72

Query: 108 ELYKECVAALQGGLLLSGKDFDAIKKALQEAFENVDMKLLNRLEMNAEEDESGATATVMF 167
            L                   + +K  ++  F  +D  +    E     D SG+TA  + 
Sbjct: 73  HLLDHITNNQDFKGSAGAPSVENVKNGIRTGFLEIDEHMRVMSEKKHGADRSGSTAVGVL 132

Query: 168 IGRDILFISHVGDCCVVLSRTGKADVLTNPHRPYGSGQVSLQEIRRIREAGGWISNGRIC 227
           I     +  + GD   +L R  K    T  H+P      +  E  RI+ AGG +   R+ 
Sbjct: 133 ISPQHTYFINCGDSRGLLCRNRKVHFFTQDHKP-----SNPLEKERIQNAGGSVMIQRVN 187

Query: 228 GDIAVSRAFGDIRFKTKKNEMLKKGVNEGRWSEKFVSSIFCVRRVQLNKDLVIASPDIFQ 287
           G +AVSRA GD  +K                         CV      + LV   P++  
Sbjct: 188 GSLAVSRALGDFDYK-------------------------CVHGKGPTEQLVSPEPEVHD 222

Query: 288 VSLGSDA-EFVLLASDGLWDYMNSSDAVKFVRNQLQQHGDVQLACEALAQAALDQHSQDN 346
           +    +  +F++LA DG+WD M + +   FVR++L+   D++  C  +    L + S+DN
Sbjct: 223 IERSEEDDQFIILACDGIWDVMGNEELCDFVRSRLEVTDDLEKVCNEVVDTCLYKGSRDN 282

Query: 347 ISIVIADL 354
           +S+++   
Sbjct: 283 MSVILICF 290
>d1txoa_ d.219.1.1 (A:) putative serine/threonine phosphatase pstp/ppp {Mycobacterium tuberculosis [TaxId: 1773]} Length = 235 Back     information, alignment and structure

Homologous Domains Detected by HHsearch ?

Original result of HHsearch against SCOP70(version1.75) database

ID ?Alignment Graph ?Length ? Definition ? Probability ?
Query362
d1a6qa2295 Protein serine/threonine phosphatase 2C, catalytic 100.0
d1txoa_235 putative serine/threonine phosphatase pstp/ppp {My 100.0
>d1a6qa2 d.219.1.1 (A:2-296) Protein serine/threonine phosphatase 2C, catalytic domain {Human (Homo sapiens) [TaxId: 9606]} Back     information, alignment and structure
class: Alpha and beta proteins (a+b)
fold: PP2C-like
superfamily: PP2C-like
family: PP2C-like
domain: Protein serine/threonine phosphatase 2C, catalytic domain
species: Human (Homo sapiens) [TaxId: 9606]

Probab=100.00  E-value=2.6e-56  Score=419.36  Aligned_cols=272  Identities=29%  Similarity=0.494  Sum_probs=242.6

Q ss_pred             CCCeeEEEEeccCCCCCCCceEEEeeCC---CCCeEEEEEEcCCCChhHHHHHHHHHHHHHHHHHhcCcccCCCChhHHH
Q 018030           56 VAGIRWGSVSLQGLREEMEDGAVIQSDG---LDGFSFAAVFDGHGGVSTVKFLRDELYKECVAALQGGLLLSGKDFDAIK  132 (362)
Q Consensus        56 ~~~~~~~~~s~~G~R~~nED~~~~~~~~---~~~~~~~~V~DG~GG~~aa~~~~~~l~~~~~~~l~~~~~~~~~~~~~~~  132 (362)
                      ...++||+++++|+|++|||++++..+.   .+++.||||||||||+.+++|+++++++.+.+.+...........+.+.
T Consensus        18 ~~~~~~g~~s~~G~R~~~ED~~~~~~~~~~~~~~~~lf~V~DGhGG~~~s~~~~~~l~~~l~~~~~~~~~~~~~~~~~~~   97 (295)
T d1a6qa2          18 GNGLRYGLSSMQGWRVEMEDAHTAVIGLPSGLESWSFFAVYDGHAGSQVAKYCCEHLLDHITNNQDFKGSAGAPSVENVK   97 (295)
T ss_dssp             ETTEEEEEEEEEETSSSCCEEEEEEEEETTTEEEEEEEEEEEEESCSHHHHHHHHHHHHHHHTSHHHHCSSSSCCHHHHH
T ss_pred             CCceEEEEEeCccCCCcccCeeEEEcccCCCCCceEEEEEEeCCCChHHHHHHHHHHHHHHHHhhhhccccccchHHHHH
Confidence            3678999999999999999999876543   3457899999999999999999999999987655543334455667899


Q ss_pred             HHHHHHHHHHHHHHHHHHhhccccCCCCceEEEEEeeCCEEEEEEeccccEEEEeCCceeeCCCCCcCCCCCCCCHhHHH
Q 018030          133 KALQEAFENVDMKLLNRLEMNAEEDESGATATVMFIGRDILFISHVGDCCVVLSRTGKADVLTNPHRPYGSGQVSLQEIR  212 (362)
Q Consensus       133 ~~L~~a~~~~~~~l~~~~~~~~~~~~~GsT~~~~~i~~~~l~~anvGDSr~~l~r~g~~~~lt~dH~~~~~~~~~~~E~~  212 (362)
                      ++|.++|.++++.+....+.......+|||++++++.++++|+||+||||+|++|+|++++||.||++.+     +.|++
T Consensus        98 ~al~~a~~~~~~~~~~~~~~~~~~~~~GtTa~~~~i~~~~l~vanvGDSR~~l~~~~~~~~lT~dH~~~~-----~~E~~  172 (295)
T d1a6qa2          98 NGIRTGFLEIDEHMRVMSEKKHGADRSGSTAVGVLISPQHTYFINCGDSRGLLCRNRKVHFFTQDHKPSN-----PLEKE  172 (295)
T ss_dssp             HHHHHHHHHHHHHHHHHHHHTTCCCCCEECEEEEEECSSEEEEEEESSCEEEEEETTEEEEECCCCCTTS-----HHHHH
T ss_pred             HHHHHHHHHHHHHHhhhhhhccCcCCCCCeEEEEEeeCCEEEEEecCCCeEEEeecccceeeccccCccc-----HHHHh
Confidence            9999999999999988877777788899999999999999999999999999999999999999999987     89999


Q ss_pred             HHHHcCCEEECCeeccccccccccCCcccccchhhhhhccCCCCcccccchhhhhhhhhcccCCCceEecceEEEEEcC-
Q 018030          213 RIREAGGWISNGRICGDIAVSRAFGDIRFKTKKNEMLKKGVNEGRWSEKFVSSIFCVRRVQLNKDLVIASPDIFQVSLG-  291 (362)
Q Consensus       213 Ri~~~gg~i~~~rv~G~l~~tRalGd~~~k~~~n~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~p~i~~~~l~-  291 (362)
                      ||+.+||+|..+|++|.+.+||||||..+|...                         ..+..+++|+++|++..+++. 
T Consensus       173 Ri~~~gg~v~~~r~~g~l~~tRa~Gd~~~k~~~-------------------------~~~~~~~~v~~~Pdi~~~~~~~  227 (295)
T d1a6qa2         173 RIQNAGGSVMIQRVNGSLAVSRALGDFDYKCVH-------------------------GKGPTEQLVSPEPEVHDIERSE  227 (295)
T ss_dssp             HHHHTTCCEETTEETTTBSCSBCEECGGGSCCT-------------------------TCCGGGSSSBCCCEEEEEECCT
T ss_pred             hHhhcCCcccccccCCceeeeeccCcHHhhhcc-------------------------ccCcccccccccccceEEEeec
Confidence            999999999999999999999999999998543                         222335778999999999986 


Q ss_pred             CCCeEEEEEcCCCcCCCChHHHHHHHHHHHHccCCHHHHHHHHHHHHHhcCCCCCeEEEEEEcCCC
Q 018030          292 SDAEFVLLASDGLWDYMNSSDAVKFVRNQLQQHGDVQLACEALAQAALDQHSQDNISIVIADLGYA  357 (362)
Q Consensus       292 ~~~d~lvL~SDGl~d~l~~~~i~~~v~~~l~~~~~~~~~a~~L~~~A~~~~~~DNiTvivv~l~~~  357 (362)
                      ++++|||||||||||+|+++|+++++++.+....+++.+|+.|+++|+++++.||||||||+|...
T Consensus       228 ~~~~flvL~SDGl~d~l~~~ei~~~v~~~~~~~~~~~~~a~~Lv~~A~~~gs~DNiTvivv~~~~~  293 (295)
T d1a6qa2         228 EDDQFIILACDGIWDVMGNEELCDFVRSRLEVTDDLEKVCNEVVDTCLYKGSRDNMSVILICFPNA  293 (295)
T ss_dssp             TTEEEEEEECHHHHTTSCHHHHHHHHHHHHTTCCCHHHHHHHHHHHHHHTTCCSCEEEEEEECTTS
T ss_pred             ccceeEeeecCcccccCCHHHHHHHHHHHhhcCCCHHHHHHHHHHHHHhcCCCCCeEEEEEeccCC
Confidence            445799999999999999999999999888888899999999999999999999999999999864
>d1txoa_ d.219.1.1 (A:) putative serine/threonine phosphatase pstp/ppp {Mycobacterium tuberculosis [TaxId: 1773]} Back     information, alignment and structure