Citrus Sinensis ID: 018035

Local Sequence Feature Prediction

Prediction and (Method)Result
Residue Number Marker
Protein Sequence ?
Secondary Structure (PSIPRED) ?
Secondary Structure Prediction (SSPRO) ?
Coil and Loop (DISEMBL) ?
Flexible Loop (DISEMBL) ?
Low Complexity Region (SEG) ?
Disordered region (IsUnstruct) ?
Disordered Region (DISOPRED) ?
Disordered Region (DISEMBL) ?
Disordered Region (DISPRO) ?
Transmembrane Helix (TMHMM) ?
Transmembrane Helix (HMMTOP) ?
Transmembrane Helix (MEMSAT) ?
TM Helix, Signal Peptide (MEMSAT_SVM) ?
TM Helix, Signal Peptide (Phobius) ?
Signal Peptide (SignalP HMM Mode) ?
Signal Peptide (SignalP NN Mode) ?
Coiled Coils (COILS) ?
Positional Conservation ?
 
--------10--------20--------30--------40--------50--------60--------70--------80--------90-------100-------110-------120-------130-------140-------150-------160-------170-------180-------190-------200-------210-------220-------230-------240-------250-------260-------270-------280-------290-------300-------310-------320-------330-------340-------350-------360--
MELKQPNMGGSLPVPCVQDLAKKPLTNVPPQYIRADQESPFICNADLAANVPVIDMSKLLSADFMDSELHKFHHACKEWGFFQLINHGVSNSLIEKMKVEIPNFFNLPMEEKKKYWQQPGDIQGFGQAFVVSEEQKLDWADMFAMYTLPTYLRKPHLFPKLPVHFRDTLESYSAELRNLALKILYQMAKALKMDPNDIKDLFEEGVQIMRMNYYPPCPQPKLVMGLTPHSDAGGLTILLQINEMDGLQIKKDGLWVPIKALPDAFIINIGDALEIVTNGSYPSIEHRATINSEKERISIATFYTPKLDGEIGPAPSLMKPETPGLFKKITFGDYLKGYLARELHAKSYIDNFRIRNEDAKRY
ccccccccccccccccHHHHHHccccccccccccccccccccccccccccccEEEccccccccHHHHHHHHHHHHHHHccEEEEEcccccHHHHHHHHHHHHHHccccHHHHHHHHcccccEEEEEcccccccccccccEEEEEEEEccccccccccccccccHHHHHHHHHHHHHHHHHHHHHHHHHHHccccHHHHHHHHccccEEEEEEcccccccccccccccccccccccEEEEEccccccEEEEEccEEEEcccccccEEEEEccEEEEEEcccccccccEEEEcccccEEEEEEEEccccccEEEccccccccccccccccccHHHHHHHHHHcccccccccccccccccccccc
ccccccccccccccHHHHHHHHcccccccHHcEcccccccccccccccccccEEEcHcccccccHHHHHHHHHHHHHHcccEEEEcccccHHHHHHHHHHHHHHHcccHHHHHHHHccccccEEEEEEEEEEccccccHHHHEEEEEcccHcccccHcccccHHHHHHHHHHHHHHHHHHHHHHHHHHHHccccHHHHHHHHHHcEEEEEEEEEcccccccccccEEEEcccccEEEEEEccccccEEEEEccEEEEcccccccEEEEEcHHHHHHcccccccccEEEcccccccEEEEEEEEEcccccEEcccHHHcccccccccccccHHHHHHHHHHccccccHHHHHHHHcccccccc
melkqpnmggslpvpcvqdlakkpltnvppqyiradqespficnadlaanvpvidmskllsadfmdseLHKFHHACKEWGFFQLINHGVSNSLIEKMKveipnffnlpmeekkkywqqpgdiqgFGQAFVVSeeqkldwadmfamytlptylrkphlfpklpvhfrDTLESYSAELRNLALKILYQMAKAlkmdpndikDLFEEGVQIMrmnyyppcpqpklvmgltphsdaggLTILLQINEmdglqikkdglwvpikalpdAFIINIGDAleivtngsypsiehratinsekERISIatfytpkldgeigpapslmkpetpglfkkitfgDYLKGYLARELHAKSYIDNFRIrnedakry
melkqpnmggslpvPCVQDLAKKPLTNVPPQYIRADQESPFICNADLAANVPVIDMSKLLSADFMDSELHKFHHACKEWGFFQLINHGVSNSLIEKMKVEIPNFFNLPMEEKKKYWQQPGDIQGFGQAFVVSEEQKLDWADMFAMYTLPTYLRKPHLFPKLPVHFRDTLESYSAELRNLALKILYQMAKALKMDPNDIKDLFEEGVQIMRMNYYPPCPQPKLVMGLTPHSDAGGLTILLQINEMDGLQIKKDGLWVPIKALPDAFIINIGDALEIVTNGSYPSIEhratinsekeriSIATFYTPKLDGEIGPAPSLMKPETPGLFKKITFGDYLKGYLARelhaksyidnfrirnedakry
MELKQPNMGGSLPVPCVQDLAKKPLTNVPPQYIRADQESPFICNADLAANVPVIDMSKLLSADFMDSELHKFHHACKEWGFFQLINHGVSNSLIEKMKVEIPNFFNLPMEEKKKYWQQPGDIQGFGQAFVVSEEQKLDWADMFAMYTLPTYLRKPHLFPKLPVHFRDTLESYSAELRNLALKILYQMAKALKMDPNDIKDLFEEGVQIMRMNYYPPCPQPKLVMGLTPHSDAGGLTILLQINEMDGLQIKKDGLWVPIKALPDAFIINIGDALEIVTNGSYPSIEHRATINSEKERISIATFYTPKLDGEIGPAPSLMKPETPGLFKKITFGDYLKGYLARELHAKSYIDNFRIRNEDAKRY
****************V**L****LTNVPPQYIRADQESPFICNADLAANVPVIDMSKLLSADFMDSELHKFHHACKEWGFFQLINHGVSNSLIEKMKVEIPNFFNLPMEEKKKYWQQPGDIQGFGQAFVVSEEQKLDWADMFAMYTLPTYLRKPHLFPKLPVHFRDTLESYSAELRNLALKILYQMAKALKMDPNDIKDLFEEGVQIMRMNYYPPCPQPKLVMGLTPHSDAGGLTILLQINEMDGLQIKKDGLWVPIKALPDAFIINIGDALEIVTNGSYPSIEHRATINSEKERISIATFYTPKLDGEI**********TPGLFKKITFGDYLKGYLARELHAKSYIDNFRI********
***************CVQDLAKKPLTNVPPQYIRADQ**********AANVPVIDMSKLLSADFMDSELHKFHHACKEWGFFQLINHGVSNSLIEKMKVEIPNFFNLPMEEKKKYWQQPGDIQGFGQAFVVSEEQKLDWADMFAMYTLPTYLRKPHLFPKLPVHFRDTLESYSAELRNLALKILYQMAKALKMDPNDIKDLFEEGVQIMRMNYYPPCPQPKLVMGLTPHSDAGGLTILLQINEMDGLQIKKDGLWVPIKALPDAFIINIGDALEIVTNGSYPSIEHRATINSEKERISIATFYTPKLDGEIGPAPSLMKPETPGLFKKITFGDYLKGYLARELHAKSYIDN***********
*********GSLPVPCVQDLAKKPLTNVPPQYIRADQESPFICNADLAANVPVIDMSKLLSADFMDSELHKFHHACKEWGFFQLINHGVSNSLIEKMKVEIPNFFNLPMEEKKKYWQQPGDIQGFGQAFVVSEEQKLDWADMFAMYTLPTYLRKPHLFPKLPVHFRDTLESYSAELRNLALKILYQMAKALKMDPNDIKDLFEEGVQIMRMNYYPPCPQPKLVMGLTPHSDAGGLTILLQINEMDGLQIKKDGLWVPIKALPDAFIINIGDALEIVTNGSYPSIEHRATINSEKERISIATFYTPKLDGEIGPAPSLMKPETPGLFKKITFGDYLKGYLARELHAKSYIDNFRIRNEDAKRY
**********SLPVPCVQDLAKKPLTNVPPQYIRADQESPFICNADLAANVPVIDMSKLLSADFMDSELHKFHHACKEWGFFQLINHGVSNSLIEKMKVEIPNFFNLPMEEKKKYWQQPGDIQGFGQAFVVSEEQKLDWADMFAMYTLPTYLRKPHLFPKLPVHFRDTLESYSAELRNLALKILYQMAKALKMDPNDIKDLFEEGVQIMRMNYYPPCPQPKLVMGLTPHSDAGGLTILLQINEMDGLQIKKDGLWVPIKALPDAFIINIGDALEIVTNGSYPSIEHRATINSEKERISIATFYTPKLDGEIGPAPSLMKPETPGLFKKITFGDYLKGYLARELHAKSYIDNFRIRN******
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MELKQPNMGGSLPVPCVQDLAKKPLTNVPPQYIRADQESPFICNADLAANVPVIDMSKLLSADFMDSELHKFHHACKEWGFFQLINHGVSNSLIEKMKVEIPNFFNLPMEEKKKYWQQPGDIQGFGQAFVVSEEQKLDWADMFAMYTLPTYLRKPHLFPKLPVHFRDTLESYSAELRNLALKILYQMAKALKMDPNDIKDLFEEGVQIMRMNYYPPCPQPKLVMGLTPHSDAGGLTILLQINEMDGLQIKKDGLWVPIKALPDAFIINIGDALEIVTNGSYPSIEHRATINSEKERISIATFYTPKLDGEIGPAPSLMKPETPGLFKKITFGDYLKGYLARELHAKSYIDNFRIRNEDAKRY
no confident homologs detected

Close Homologs for Annotation Transfer

Close Homologs in SWISS-PROT Database Detected by BLAST ?

Original result of BLAST against SWISS-PROT Database

ID ?Alignment graph ?Length ? Definition ? RBH(Q2H) ? RBH(H2Q) ? Q cover ? H cover ? Identity ? E-value ?
Query362 2.2.26 [Sep-21-2011]
Q39224358 Protein SRG1 OS=Arabidops yes no 0.977 0.988 0.558 1e-119
D4N500364 Thebaine 6-O-demethylase N/A no 0.958 0.953 0.525 1e-109
D4N501364 Probable 2-oxoglutarate/F N/A no 0.958 0.953 0.516 1e-109
D4N502360 Codeine O-demethylase OS= N/A no 0.955 0.961 0.538 1e-107
A2A1A0352 S-norcoclaurine synthase N/A no 0.941 0.968 0.464 3e-84
Q9M547334 Flavonol synthase/flavano N/A no 0.864 0.937 0.362 5e-53
P51092430 Leucoanthocyanidin dioxyg N/A no 0.939 0.790 0.340 7e-52
Q96323356 Leucoanthocyanidin dioxyg no no 0.903 0.918 0.347 2e-51
P51091357 Leucoanthocyanidin dioxyg N/A no 0.881 0.893 0.332 7e-50
Q07512348 Flavonol synthase/flavano N/A no 0.881 0.916 0.344 8e-50
>sp|Q39224|SRG1_ARATH Protein SRG1 OS=Arabidopsis thaliana GN=SRG1 PE=2 SV=1 Back     alignment and function desciption
 Score =  429 bits (1104), Expect = e-119,   Method: Compositional matrix adjust.
 Identities = 200/358 (55%), Positives = 273/358 (76%), Gaps = 4/358 (1%)

Query: 1   MELKQPNMGGSLPVPCVQDLAK-KPLTNVPPQYIRADQESPFICNA-DLAANVPVIDMSK 58
           ME K      S+ VP VQ++ K K +T VPP+Y+R+DQ+   + +  D+   +P+IDM +
Sbjct: 1   MEAKGAAQWSSILVPSVQEMVKEKTITTVPPRYVRSDQDKTEVDDDFDVKIEIPIIDMKR 60

Query: 59  LLSADFMDSELHKFHHACKEWGFFQLINHGVSNSLIEKMKVEIPNFFNLPMEEKKKYWQQ 118
           L S+  MDSE+ K   ACKEWGFFQL+NHG+ +S ++K+K EI +FFNLPMEEKKK+WQ+
Sbjct: 61  LCSSTTMDSEVEKLDFACKEWGFFQLVNHGIDSSFLDKVKSEIQDFFNLPMEEKKKFWQR 120

Query: 119 PGDIQGFGQAFVVSEEQKLDWADMFAMYTLPTYLRKPHLFPKLPVHFRDTLESYSAELRN 178
           P +I+GFGQAFVVSE+QKLDWAD+F     P  LRKPHLFPKLP+ FRDTLE YS+E+++
Sbjct: 121 PDEIEGFGQAFVVSEDQKLDWADLFFHTVQPVELRKPHLFPKLPLPFRDTLEMYSSEVQS 180

Query: 179 LALKILYQMAKALKMDPNDIKDLFE--EGVQIMRMNYYPPCPQPKLVMGLTPHSDAGGLT 236
           +A  ++ +MA+AL++ P +++ LF+  + VQ MRMNYYPPCPQP  V+GLTPHSD+ GLT
Sbjct: 181 VAKILIAKMARALEIKPEELEKLFDDVDSVQSMRMNYYPPCPQPDQVIGLTPHSDSVGLT 240

Query: 237 ILLQINEMDGLQIKKDGLWVPIKALPDAFIINIGDALEIVTNGSYPSIEHRATINSEKER 296
           +L+Q+N+++GLQIKKDG WVP+K LP+AFI+NIGD LEI+TNG+Y SIEHR  +NSEKER
Sbjct: 241 VLMQVNDVEGLQIKKDGKWVPVKPLPNAFIVNIGDVLEIITNGTYRSIEHRGVVNSEKER 300

Query: 297 ISIATFYTPKLDGEIGPAPSLMKPETPGLFKKITFGDYLKGYLARELHAKSYIDNFRI 354
           +SIATF+   +  E+GPA SL++ +    FK++T  +Y  G  +R L  K+Y+D  RI
Sbjct: 301 LSIATFHNVGMYKEVGPAKSLVERQKVARFKRLTMKEYNDGLFSRTLDGKAYLDALRI 358

Arabidopsis thaliana (taxid: 3702)
>sp|D4N500|DIOX1_PAPSO Thebaine 6-O-demethylase OS=Papaver somniferum GN=T6ODM PE=1 SV=1 Back     alignment and function description
>sp|D4N501|DIOX2_PAPSO Probable 2-oxoglutarate/Fe(II)-dependent dioxygenase OS=Papaver somniferum GN=DIOX2 PE=2 SV=1 Back     alignment and function description
>sp|D4N502|DIOX3_PAPSO Codeine O-demethylase OS=Papaver somniferum GN=CODM PE=1 SV=1 Back     alignment and function description
>sp|A2A1A0|NCS1_COPJA S-norcoclaurine synthase 1 OS=Coptis japonica GN=NCS1 PE=1 SV=1 Back     alignment and function description
>sp|Q9M547|FLS_EUSER Flavonol synthase/flavanone 3-hydroxylase OS=Eustoma exaltatum subsp. russellianum GN=FLS PE=2 SV=1 Back     alignment and function description
>sp|P51092|LDOX_PETHY Leucoanthocyanidin dioxygenase OS=Petunia hybrida GN=ANT17 PE=2 SV=1 Back     alignment and function description
>sp|Q96323|LDOX_ARATH Leucoanthocyanidin dioxygenase OS=Arabidopsis thaliana GN=LDOX PE=1 SV=1 Back     alignment and function description
>sp|P51091|LDOX_MALDO Leucoanthocyanidin dioxygenase OS=Malus domestica GN=ANS PE=2 SV=1 Back     alignment and function description
>sp|Q07512|FLS_PETHY Flavonol synthase/flavanone 3-hydroxylase OS=Petunia hybrida GN=FL PE=2 SV=1 Back     alignment and function description

Close Homologs in the Non-Redundant Database Detected by BLAST ?

Original result of BLAST against Nonredundant Database

GI ?Alignment Graph ?Length ? Definition ? Q cover ? H cover ? Identity ? E-value ?
Query362
225462507366 PREDICTED: protein SRG1 [Vitis vinifera] 0.986 0.975 0.661 1e-143
224061027362 predicted protein [Populus trichocarpa] 0.966 0.966 0.650 1e-136
225453297364 PREDICTED: protein SRG1 [Vitis vinifera] 0.953 0.947 0.644 1e-136
359483589361 PREDICTED: LOW QUALITY PROTEIN: protein 0.953 0.955 0.650 1e-135
224061381359 predicted protein [Populus trichocarpa] 0.988 0.997 0.627 1e-134
255557461360 Flavonol synthase/flavanone 3-hydroxylas 0.961 0.966 0.644 1e-133
255557471366 Flavonol synthase/flavanone 3-hydroxylas 0.969 0.959 0.629 1e-133
449434270358 PREDICTED: protein SRG1-like [Cucumis sa 0.953 0.963 0.627 1e-132
224061385355 predicted protein [Populus trichocarpa] 0.977 0.997 0.628 1e-132
255575141364 Leucoanthocyanidin dioxygenase, putative 0.953 0.947 0.625 1e-131
>gi|225462507|ref|XP_002269087.1| PREDICTED: protein SRG1 [Vitis vinifera] gi|297740615|emb|CBI30797.3| unnamed protein product [Vitis vinifera] Back     alignment and taxonomy information
 Score =  515 bits (1327), Expect = e-143,   Method: Compositional matrix adjust.
 Identities = 238/360 (66%), Positives = 297/360 (82%), Gaps = 3/360 (0%)

Query: 4   KQPNMGGSLPVPCVQDLAKKPLTNVPPQYIRADQESPFICNADLAAN---VPVIDMSKLL 60
           K  ++GGSL VP VQ+LAKK LT VPP+Y+R +Q+ PF+ ++    +   VPVID  +L+
Sbjct: 5   KLTSLGGSLMVPSVQELAKKTLTTVPPRYLRPEQDPPFLSDSSTTCSSIHVPVIDFHRLV 64

Query: 61  SADFMDSELHKFHHACKEWGFFQLINHGVSNSLIEKMKVEIPNFFNLPMEEKKKYWQQPG 120
           S D +DSEL K H+ACK+WGFFQL NHGVS++L+E++KVE+  FFNLPMEEKKK+WQ+P 
Sbjct: 65  SGDVLDSELDKLHYACKDWGFFQLTNHGVSSTLVERVKVEVQEFFNLPMEEKKKFWQEPE 124

Query: 121 DIQGFGQAFVVSEEQKLDWADMFAMYTLPTYLRKPHLFPKLPVHFRDTLESYSAELRNLA 180
           D++GFGQAFV+SEEQKLDWADMF M TLPTYLRKPHLFPKLP+  RD+LE Y+ ELRNLA
Sbjct: 125 DLEGFGQAFVISEEQKLDWADMFYMITLPTYLRKPHLFPKLPISLRDSLEIYAVELRNLA 184

Query: 181 LKILYQMAKALKMDPNDIKDLFEEGVQIMRMNYYPPCPQPKLVMGLTPHSDAGGLTILLQ 240
           + IL  +AKALKM+ ND+K+LFEEG Q MRMNYYP CPQP  V+GLTPHSDA GLTILLQ
Sbjct: 185 MTILGFIAKALKMEANDMKELFEEGHQGMRMNYYPLCPQPDQVIGLTPHSDAVGLTILLQ 244

Query: 241 INEMDGLQIKKDGLWVPIKALPDAFIINIGDALEIVTNGSYPSIEHRATINSEKERISIA 300
           +NEM+GLQI+KDG+WVPIK LP AFI+N+GD LEIVTN +Y SIEHRAT+NS KER+S+A
Sbjct: 245 VNEMEGLQIRKDGMWVPIKPLPGAFIVNMGDILEIVTNAAYRSIEHRATVNSIKERLSVA 304

Query: 301 TFYTPKLDGEIGPAPSLMKPETPGLFKKITFGDYLKGYLARELHAKSYIDNFRIRNEDAK 360
           TFY+PKL+G++GPAPSL+ P++P LFK+I   DY KG  +RELH KSY++  R    +A+
Sbjct: 305 TFYSPKLNGDMGPAPSLVSPDSPSLFKRIGVADYFKGLFSRELHGKSYLEVLRTETGEAQ 364

Source: Vitis vinifera

Species: Vitis vinifera

Genus: Vitis

Family: Vitaceae

Order: Vitales

Class:

Phylum: Streptophyta

Superkingdom: Eukaryota
>gi|224061027|ref|XP_002300322.1| predicted protein [Populus trichocarpa] gi|222847580|gb|EEE85127.1| predicted protein [Populus trichocarpa] Back     alignment and taxonomy information
>gi|225453297|ref|XP_002268288.1| PREDICTED: protein SRG1 [Vitis vinifera] Back     alignment and taxonomy information
>gi|359483589|ref|XP_003632983.1| PREDICTED: LOW QUALITY PROTEIN: protein SRG1-like [Vitis vinifera] Back     alignment and taxonomy information
>gi|224061381|ref|XP_002300451.1| predicted protein [Populus trichocarpa] gi|222847709|gb|EEE85256.1| predicted protein [Populus trichocarpa] Back     alignment and taxonomy information
>gi|255557461|ref|XP_002519761.1| Flavonol synthase/flavanone 3-hydroxylase, putative [Ricinus communis] gi|223541178|gb|EEF42734.1| Flavonol synthase/flavanone 3-hydroxylase, putative [Ricinus communis] Back     alignment and taxonomy information
>gi|255557471|ref|XP_002519766.1| Flavonol synthase/flavanone 3-hydroxylase, putative [Ricinus communis] gi|223541183|gb|EEF42739.1| Flavonol synthase/flavanone 3-hydroxylase, putative [Ricinus communis] Back     alignment and taxonomy information
>gi|449434270|ref|XP_004134919.1| PREDICTED: protein SRG1-like [Cucumis sativus] gi|449479526|ref|XP_004155625.1| PREDICTED: protein SRG1-like [Cucumis sativus] Back     alignment and taxonomy information
>gi|224061385|ref|XP_002300453.1| predicted protein [Populus trichocarpa] gi|222847711|gb|EEE85258.1| predicted protein [Populus trichocarpa] Back     alignment and taxonomy information
>gi|255575141|ref|XP_002528475.1| Leucoanthocyanidin dioxygenase, putative [Ricinus communis] gi|223532084|gb|EEF33892.1| Leucoanthocyanidin dioxygenase, putative [Ricinus communis] Back     alignment and taxonomy information

Prediction of Gene Ontology (GO) Terms

Close Homologs with Gene Ontology terms Detected by BLAST ?

Original result of BLAST against Gene Ontology (AMIGO)

ID ? Alignment graph ? Length ? Definition ? Q cover ? H cover ? Identity ? E-value ?
Query362
TAIR|locus:2020407358 SRG1 "senescence-related gene 0.977 0.988 0.558 3.8e-110
TAIR|locus:2020422361 AT1G17010 [Arabidopsis thalian 0.986 0.988 0.548 5.1e-106
TAIR|locus:2122679353 AT4G25310 [Arabidopsis thalian 0.936 0.960 0.573 3.2e-104
TAIR|locus:2122669356 AT4G25300 [Arabidopsis thalian 0.975 0.991 0.543 2.9e-103
TAIR|locus:2202980356 AT1G78550 [Arabidopsis thalian 0.975 0.991 0.515 1.7e-98
TAIR|locus:2089428364 LBO1 "LATERAL BRANCHING OXIDOR 0.939 0.934 0.448 7.6e-80
TAIR|locus:2042942353 AT2G38240 [Arabidopsis thalian 0.881 0.903 0.382 1.2e-65
TAIR|locus:2169697371 AT5G05600 [Arabidopsis thalian 0.936 0.913 0.354 6.9e-63
TAIR|locus:2082058363 JRG21 "jasmonate-regulated gen 0.941 0.939 0.341 3.2e-58
TAIR|locus:2010242348 AT1G49390 [Arabidopsis thalian 0.837 0.870 0.383 2.2e-57
TAIR|locus:2020407 SRG1 "senescence-related gene 1" [Arabidopsis thaliana (taxid:3702)] Back     alignment and assigned GO terms
 Score = 1088 (388.1 bits), Expect = 3.8e-110, P = 3.8e-110
 Identities = 200/358 (55%), Positives = 273/358 (76%)

Query:     1 MELKQPNMGGSLPVPCVQDLAK-KPLTNVPPQYIRADQESPFICNA-DLAANVPVIDMSK 58
             ME K      S+ VP VQ++ K K +T VPP+Y+R+DQ+   + +  D+   +P+IDM +
Sbjct:     1 MEAKGAAQWSSILVPSVQEMVKEKTITTVPPRYVRSDQDKTEVDDDFDVKIEIPIIDMKR 60

Query:    59 LLSADFMDSELHKFHHACKEWGFFQLINHGVSNSLIEKMKVEIPNFFNLPMEEKKKYWQQ 118
             L S+  MDSE+ K   ACKEWGFFQL+NHG+ +S ++K+K EI +FFNLPMEEKKK+WQ+
Sbjct:    61 LCSSTTMDSEVEKLDFACKEWGFFQLVNHGIDSSFLDKVKSEIQDFFNLPMEEKKKFWQR 120

Query:   119 PGDIQGFGQAFVVSEEQKLDWADMFAMYTLPTYLRKPHLFPKLPVHFRDTLESYSAELRN 178
             P +I+GFGQAFVVSE+QKLDWAD+F     P  LRKPHLFPKLP+ FRDTLE YS+E+++
Sbjct:   121 PDEIEGFGQAFVVSEDQKLDWADLFFHTVQPVELRKPHLFPKLPLPFRDTLEMYSSEVQS 180

Query:   179 LALKILYQMAKALKMDPNDIKDLFEE--GVQIMRMNYYPPCPQPKLVMGLTPHSDAGGLT 236
             +A  ++ +MA+AL++ P +++ LF++   VQ MRMNYYPPCPQP  V+GLTPHSD+ GLT
Sbjct:   181 VAKILIAKMARALEIKPEELEKLFDDVDSVQSMRMNYYPPCPQPDQVIGLTPHSDSVGLT 240

Query:   237 ILLQINEMDGLQIKKDGLWVPIKALPDAFIINIGDALEIVTNGSYPSIEHRATINSEKER 296
             +L+Q+N+++GLQIKKDG WVP+K LP+AFI+NIGD LEI+TNG+Y SIEHR  +NSEKER
Sbjct:   241 VLMQVNDVEGLQIKKDGKWVPVKPLPNAFIVNIGDVLEIITNGTYRSIEHRGVVNSEKER 300

Query:   297 ISIATFYTPKLDGEIGPAPSLMKPETPGLFKKITFGDYLKGYLARELHAKSYIDNFRI 354
             +SIATF+   +  E+GPA SL++ +    FK++T  +Y  G  +R L  K+Y+D  RI
Sbjct:   301 LSIATFHNVGMYKEVGPAKSLVERQKVARFKRLTMKEYNDGLFSRTLDGKAYLDALRI 358
GO:0005737 "cytoplasm" evidence=ISM
GO:0009813 "flavonoid biosynthetic process" evidence=ISS
GO:0016491 "oxidoreductase activity" evidence=IEA
GO:0016706 "oxidoreductase activity, acting on paired donors, with incorporation or reduction of molecular oxygen, 2-oxoglutarate as one donor, and incorporation of one atom each of oxygen into both donors" evidence=IEA;ISS
GO:0055114 "oxidation-reduction process" evidence=IEA
GO:0009737 "response to abscisic acid stimulus" evidence=RCA
GO:0009793 "embryo development ending in seed dormancy" evidence=RCA
GO:0009830 "cell wall modification involved in abscission" evidence=RCA
GO:0009845 "seed germination" evidence=RCA
GO:0010162 "seed dormancy process" evidence=RCA
GO:0010260 "organ senescence" evidence=IEP;RCA
GO:0016682 "oxidoreductase activity, acting on diphenols and related substances as donors, oxygen as acceptor" evidence=ISS
TAIR|locus:2020422 AT1G17010 [Arabidopsis thaliana (taxid:3702)] Back     alignment and assigned GO terms
TAIR|locus:2122679 AT4G25310 [Arabidopsis thaliana (taxid:3702)] Back     alignment and assigned GO terms
TAIR|locus:2122669 AT4G25300 [Arabidopsis thaliana (taxid:3702)] Back     alignment and assigned GO terms
TAIR|locus:2202980 AT1G78550 [Arabidopsis thaliana (taxid:3702)] Back     alignment and assigned GO terms
TAIR|locus:2089428 LBO1 "LATERAL BRANCHING OXIDOREDUCTASE 1" [Arabidopsis thaliana (taxid:3702)] Back     alignment and assigned GO terms
TAIR|locus:2042942 AT2G38240 [Arabidopsis thaliana (taxid:3702)] Back     alignment and assigned GO terms
TAIR|locus:2169697 AT5G05600 [Arabidopsis thaliana (taxid:3702)] Back     alignment and assigned GO terms
TAIR|locus:2082058 JRG21 "jasmonate-regulated gene 21" [Arabidopsis thaliana (taxid:3702)] Back     alignment and assigned GO terms
TAIR|locus:2010242 AT1G49390 [Arabidopsis thaliana (taxid:3702)] Back     alignment and assigned GO terms

Prediction of Enzyme Commission (EC) Number

EC Number Prediction by Annotation Transfer from SWISS-PROT Entries ?

Original result of BLAST against SWISS-PROT

ID ?Name ?Annotated EC number ?Identity ?Query coverage ?Hit coverage ?RBH(Q2H) ?RBH(H2Q) ?
D4N501DIOX2_PAPSO1, ., 1, 4, ., 1, 1, ., -0.51680.95850.9532N/Ano
D4N502DIOX3_PAPSO1, ., 1, 4, ., 1, 1, ., 3, 20.53820.95580.9611N/Ano
Q39224SRG1_ARATHNo assigned EC number0.55860.97790.9888yesno
D4N500DIOX1_PAPSO1, ., 1, 4, ., 1, 1, ., 3, 10.52520.95850.9532N/Ano

EC Number Prediction by Ezypred Server ?

Original result from Ezypred Server

Fail to connect to Ezypred Server

EC Number Prediction by EFICAz Software ?

Prediction LevelEC numberConfidence of Prediction
3rd Layer1.14.110.963
4th Layer1.14.11.11LOW CONFIDENCE prediction!
4th Layer1.14.11.4LOW CONFIDENCE prediction!

Prediction of Functionally Associated Proteins

Functionally Associated Proteins Detected by STRING ?

Original result from the STRING server

Fail to connect to STRING server

Conserved Domains and Related Protein Families

Conserved Domains Detected by RPS-BLAST ?

Original result of RPS-BLAST against CDD database part I

ID ?Alignment Graph ?Length ? Definition ? E-value ?
Query362
PLN02216357 PLN02216, PLN02216, protein SRG1 1e-170
PLN02758361 PLN02758, PLN02758, oxidoreductase, 2OG-Fe(II) oxy 1e-123
PLN02393362 PLN02393, PLN02393, leucoanthocyanidin dioxygenase 1e-103
PLN03178360 PLN03178, PLN03178, leucoanthocyanidin dioxygenase 7e-89
PLN02639337 PLN02639, PLN02639, oxidoreductase, 2OG-Fe(II) oxy 2e-81
PLN00417348 PLN00417, PLN00417, oxidoreductase, 2OG-Fe(II) oxy 1e-73
PLN02912348 PLN02912, PLN02912, oxidoreductase, 2OG-Fe(II) oxy 2e-71
PLN02947374 PLN02947, PLN02947, oxidoreductase 8e-71
PLN02704335 PLN02704, PLN02704, flavonol synthase 1e-66
PLN02276361 PLN02276, PLN02276, gibberellin 20-oxidase 7e-66
PLN02254358 PLN02254, PLN02254, gibberellin 3-beta-dioxygenase 2e-63
PLN02750345 PLN02750, PLN02750, oxidoreductase, 2OG-Fe(II) oxy 2e-61
PLN02904357 PLN02904, PLN02904, oxidoreductase 4e-60
PLN02299321 PLN02299, PLN02299, 1-aminocyclopropane-1-carboxyl 1e-56
PLN03001262 PLN03001, PLN03001, oxidoreductase, 2OG-Fe(II) oxy 2e-56
PLN02403303 PLN02403, PLN02403, aminocyclopropanecarboxylate o 3e-55
PLN02515358 PLN02515, PLN02515, naringenin,2-oxoglutarate 3-di 2e-54
COG3491322 COG3491, PcbC, Isopenicillin N synthase and relate 2e-49
PLN02997325 PLN02997, PLN02997, flavonol synthase 3e-45
PLN02485329 PLN02485, PLN02485, oxidoreductase 4e-40
PLN02984341 PLN02984, PLN02984, oxidoreductase, 2OG-Fe(II) oxy 4e-39
PLN02365300 PLN02365, PLN02365, 2-oxoglutarate-dependent dioxy 5e-38
PLN02156335 PLN02156, PLN02156, gibberellin 2-beta-dioxygenase 1e-37
PTZ00273320 PTZ00273, PTZ00273, oxidase reductase; Provisional 2e-37
pfam14226113 pfam14226, DIOX_N, non-haem dioxygenase in morphin 2e-32
pfam0317196 pfam03171, 2OG-FeII_Oxy, 2OG-Fe(II) oxygenase supe 5e-32
PLN03002332 PLN03002, PLN03002, oxidoreductase, 2OG-Fe(II) oxy 5e-16
PLN03176120 PLN03176, PLN03176, flavanone-3-hydroxylase; Provi 2e-11
>gnl|CDD|215129 PLN02216, PLN02216, protein SRG1 Back     alignment and domain information 
 Score =  478 bits (1231), Expect = e-170
 Identities = 204/357 (57%), Positives = 273/357 (76%), Gaps = 3/357 (0%)

Query: 1   MELKQPNMGGSLPVPCVQDLAK-KPLTNVPPQYIRADQESPFICN-ADLAANVPVIDMSK 58
           ME K      S+ VP VQ++ K K +T VPP+Y+R+DQ+   I   + L++ +P+IDM +
Sbjct: 1   MEAKGATQWSSIIVPSVQEMVKEKMITTVPPRYVRSDQDKTEIAVDSGLSSEIPIIDMKR 60

Query: 59  LLSADFMDSELHKFHHACKEWGFFQLINHGVSNSLIEKMKVEIPNFFNLPMEEKKKYWQQ 118
           L S+  MDSE+ K   ACKEWGFFQL+NHG+ +S ++K+K EI +FFNLPMEEKKK WQ+
Sbjct: 61  LCSSTAMDSEVEKLDFACKEWGFFQLVNHGIDSSFLDKVKSEIQDFFNLPMEEKKKLWQR 120

Query: 119 PGDIQGFGQAFVVSEEQKLDWADMFAMYTLPTYLRKPHLFPKLPVHFRDTLESYSAELRN 178
           PG+I+GFGQAFVVSE+QKLDWADMF +   P  LRKPHLFPKLP+ FRDTLE+YSAE+++
Sbjct: 121 PGEIEGFGQAFVVSEDQKLDWADMFFLTMQPVRLRKPHLFPKLPLPFRDTLETYSAEVKS 180

Query: 179 LALKILYQMAKALKMDPNDIKDLFEEGV-QIMRMNYYPPCPQPKLVMGLTPHSDAGGLTI 237
           +A  +  +MA AL++ P +++ LF++ + Q +RMNYYPPCPQP  V+GLTPHSDA GLTI
Sbjct: 181 IAKILFAKMASALEIKPEEMEKLFDDDLGQSIRMNYYPPCPQPDQVIGLTPHSDAVGLTI 240

Query: 238 LLQINEMDGLQIKKDGLWVPIKALPDAFIINIGDALEIVTNGSYPSIEHRATINSEKERI 297
           LLQ+NE++GLQIKKDG WV +K LP+A ++N+GD LEI+TNG+Y SIEHR  +NSEKER+
Sbjct: 241 LLQVNEVEGLQIKKDGKWVSVKPLPNALVVNVGDILEIITNGTYRSIEHRGVVNSEKERL 300

Query: 298 SIATFYTPKLDGEIGPAPSLMKPETPGLFKKITFGDYLKGYLARELHAKSYIDNFRI 354
           S+ATF+   +  EIGPA SL++ +   LFK +T  +Y  G  +REL  K+Y+D  RI
Sbjct: 301 SVATFHNTGMGKEIGPAKSLVERQKAALFKSLTTKEYFDGLFSRELDGKAYLDAMRI 357

Length = 357
>gnl|CDD|215404 PLN02758, PLN02758, oxidoreductase, 2OG-Fe(II) oxygenase family protein Back     alignment and domain information
>gnl|CDD|215220 PLN02393, PLN02393, leucoanthocyanidin dioxygenase like protein Back     alignment and domain information
>gnl|CDD|215614 PLN03178, PLN03178, leucoanthocyanidin dioxygenase; Provisional Back     alignment and domain information
>gnl|CDD|178245 PLN02639, PLN02639, oxidoreductase, 2OG-Fe(II) oxygenase family protein Back     alignment and domain information
>gnl|CDD|177810 PLN00417, PLN00417, oxidoreductase, 2OG-Fe(II) oxygenase family protein Back     alignment and domain information
>gnl|CDD|178500 PLN02912, PLN02912, oxidoreductase, 2OG-Fe(II) oxygenase family protein Back     alignment and domain information
>gnl|CDD|215510 PLN02947, PLN02947, oxidoreductase Back     alignment and domain information
>gnl|CDD|166345 PLN02704, PLN02704, flavonol synthase Back     alignment and domain information
>gnl|CDD|215156 PLN02276, PLN02276, gibberellin 20-oxidase Back     alignment and domain information
>gnl|CDD|215142 PLN02254, PLN02254, gibberellin 3-beta-dioxygenase Back     alignment and domain information
>gnl|CDD|178351 PLN02750, PLN02750, oxidoreductase, 2OG-Fe(II) oxygenase family protein Back     alignment and domain information
>gnl|CDD|178492 PLN02904, PLN02904, oxidoreductase Back     alignment and domain information
>gnl|CDD|215168 PLN02299, PLN02299, 1-aminocyclopropane-1-carboxylate oxidase Back     alignment and domain information
>gnl|CDD|166642 PLN03001, PLN03001, oxidoreductase, 2OG-Fe(II) oxygenase family protein Back     alignment and domain information
>gnl|CDD|178025 PLN02403, PLN02403, aminocyclopropanecarboxylate oxidase Back     alignment and domain information
>gnl|CDD|178130 PLN02515, PLN02515, naringenin,2-oxoglutarate 3-dioxygenase Back     alignment and domain information
>gnl|CDD|226022 COG3491, PcbC, Isopenicillin N synthase and related dioxygenases [General function prediction only] Back     alignment and domain information
>gnl|CDD|178576 PLN02997, PLN02997, flavonol synthase Back     alignment and domain information
>gnl|CDD|215267 PLN02485, PLN02485, oxidoreductase Back     alignment and domain information
>gnl|CDD|215534 PLN02984, PLN02984, oxidoreductase, 2OG-Fe(II) oxygenase family protein Back     alignment and domain information
>gnl|CDD|177993 PLN02365, PLN02365, 2-oxoglutarate-dependent dioxygenase Back     alignment and domain information
>gnl|CDD|177816 PLN02156, PLN02156, gibberellin 2-beta-dioxygenase Back     alignment and domain information
>gnl|CDD|140299 PTZ00273, PTZ00273, oxidase reductase; Provisional Back     alignment and domain information
>gnl|CDD|222608 pfam14226, DIOX_N, non-haem dioxygenase in morphine synthesis N-terminal Back     alignment and domain information
>gnl|CDD|217403 pfam03171, 2OG-FeII_Oxy, 2OG-Fe(II) oxygenase superfamily Back     alignment and domain information
>gnl|CDD|178579 PLN03002, PLN03002, oxidoreductase, 2OG-Fe(II) oxygenase family protein Back     alignment and domain information
>gnl|CDD|178720 PLN03176, PLN03176, flavanone-3-hydroxylase; Provisional Back     alignment and domain information

Conserved Domains Detected by HHsearch ?

Original result of HHsearch against CDD database

ID ?Alignment Graph ?Length ? Definition ? Probability ?
Query 362
PLN02216357 protein SRG1 100.0
PLN02758361 oxidoreductase, 2OG-Fe(II) oxygenase family protei 100.0
PLN02947374 oxidoreductase 100.0
PLN02393362 leucoanthocyanidin dioxygenase like protein 100.0
PLN03178360 leucoanthocyanidin dioxygenase; Provisional 100.0
PLN02904357 oxidoreductase 100.0
PLN02254358 gibberellin 3-beta-dioxygenase 100.0
PLN02912348 oxidoreductase, 2OG-Fe(II) oxygenase family protei 100.0
PLN02639337 oxidoreductase, 2OG-Fe(II) oxygenase family protei 100.0
PLN02276361 gibberellin 20-oxidase 100.0
PLN00417348 oxidoreductase, 2OG-Fe(II) oxygenase family protei 100.0
PLN02515358 naringenin,2-oxoglutarate 3-dioxygenase 100.0
PLN02704335 flavonol synthase 100.0
PLN02750345 oxidoreductase, 2OG-Fe(II) oxygenase family protei 100.0
PLN02997325 flavonol synthase 100.0
PLN02299321 1-aminocyclopropane-1-carboxylate oxidase 100.0
PTZ00273320 oxidase reductase; Provisional 100.0
KOG0143322 consensus Iron/ascorbate family oxidoreductases [S 100.0
PLN02485329 oxidoreductase 100.0
PLN02156335 gibberellin 2-beta-dioxygenase 100.0
PLN03002332 oxidoreductase, 2OG-Fe(II) oxygenase family protei 100.0
COG3491322 PcbC Isopenicillin N synthase and related dioxygen 100.0
PLN02365300 2-oxoglutarate-dependent dioxygenase 100.0
PLN02403303 aminocyclopropanecarboxylate oxidase 100.0
PLN02984341 oxidoreductase, 2OG-Fe(II) oxygenase family protei 100.0
PLN03001262 oxidoreductase, 2OG-Fe(II) oxygenase family protei 100.0
PF0317198 2OG-FeII_Oxy: 2OG-Fe(II) oxygenase superfamily Ent 99.91
PF14226116 DIOX_N: non-haem dioxygenase in morphine synthesis 99.88
PLN03176120 flavanone-3-hydroxylase; Provisional 99.86
PF13640100 2OG-FeII_Oxy_3: 2OG-Fe(II) oxygenase superfamily; 96.55
PRK05467226 Fe(II)-dependent oxygenase superfamily protein; Pr 95.12
smart00702178 P4Hc Prolyl 4-hydroxylase alpha subunit homologues 94.99
PF12851171 Tet_JBP: Oxygenase domain of the 2OGFeDO superfami 91.56
PRK15401213 alpha-ketoglutarate-dependent dioxygenase AlkB; Pr 88.34
PF13532194 2OG-FeII_Oxy_2: 2OG-Fe(II) oxygenase superfamily; 84.75
>PLN02216 protein SRG1 Back     alignment and domain information 
Probab=100.00  E-value=4e-82  Score=609.87  Aligned_cols=342  Identities=58%  Similarity=1.038  Sum_probs=306.9

Q ss_pred             CccchHHHhhC-CCCCCCCCCCCCCCCCCcccC-CCCCCCcceEeCCCCCCCChhhHHHHHHHHHHHhcceEEEEecCCC
Q 018035           13 PVPCVQDLAKK-PLTNVPPQYIRADQESPFICN-ADLAANVPVIDMSKLLSADFMDSELHKFHHACKEWGFFQLINHGVS   90 (362)
Q Consensus        13 ~~~~~~~~~~~-~~~~~p~~~~~~~~~~~~~~~-~~~~~~IPvIDls~l~~~d~~~~~~~~l~~A~~~~Gff~l~nhGi~   90 (362)
                      .+++|+.|+.+ ++..||..|++|++++|.+.. .....+||+|||+.+.+++..++++++|.+||++||||||+||||+
T Consensus        13 ~~~~~~~~~~~~~~~~~p~~~v~p~~~~~~~~~~~~~~~~iPvIDls~~~~~~~~~~~~~~l~~Ac~~~GFF~v~nHGI~   92 (357)
T PLN02216         13 IVPSVQEMVKEKMITTVPPRYVRSDQDKTEIAVDSGLSSEIPIIDMKRLCSSTAMDSEVEKLDFACKEWGFFQLVNHGID   92 (357)
T ss_pred             cchhHHHHHhcCCCCCCCHhhCcCcccCCccccccCcCCCCCeEEChhccCCccHHHHHHHHHHHHHHCcEEEEECCCCC
Confidence            46889999877 788999999999999875321 1112579999999987665434578999999999999999999999


Q ss_pred             HHHHHHHHHHhhhhcCCCHHHHhhhccCCCCccccccccccccccccccccccccccCCCCCCCCCCCCCCCchHHHHHH
Q 018035           91 NSLIEKMKVEIPNFFNLPMEEKKKYWQQPGDIQGFGQAFVVSEEQKLDWADMFAMYTLPTYLRKPHLFPKLPVHFRDTLE  170 (362)
Q Consensus        91 ~~l~~~~~~~~~~fF~lp~e~K~~~~~~~~~~~Gy~~~~~~~~~~~~d~~e~~~~~~~p~~~~~~~~wP~~~~~fr~~~~  170 (362)
                      .++++++++++++||+||.|+|+++....+..+||+.........+.||+|.+.+...|.....+|.||+.++.||+.++
T Consensus        93 ~~li~~~~~~~~~FF~LP~eeK~k~~~~~~~~~Gy~~~~~~~~~~~~d~~e~~~~~~~p~~~~~~~~WP~~p~~fr~~~~  172 (357)
T PLN02216         93 SSFLDKVKSEIQDFFNLPMEEKKKLWQRPGEIEGFGQAFVVSEDQKLDWADMFFLTMQPVRLRKPHLFPKLPLPFRDTLE  172 (357)
T ss_pred             HHHHHHHHHHHHHHHcCCHHHHHhhhcCCCCccccCccccccccccCCceeeeeeeccCcccccchhcccchHHHHHHHH
Confidence            99999999999999999999999997755667899765444445667999999887666556678999998899999999


Q ss_pred             HHHHHHHHHHHHHHHHHHHhCCCChhhHHHhhhc-cceeeEEeecCCCCCCCccccccccccCCceEEEEecCCCCCeee
Q 018035          171 SYSAELRNLALKILYQMAKALKMDPNDIKDLFEE-GVQIMRMNYYPPCPQPKLVMGLTPHSDAGGLTILLQINEMDGLQI  249 (362)
Q Consensus       171 ~y~~~~~~la~~ll~~l~~~Lgl~~~~~~~~~~~-~~~~lrl~~Yp~~~~~~~~~g~~~HtD~~~lTiL~q~~~~~GLqV  249 (362)
                      +|+++|.+|+.+|+++|+++||+++++|.+.+.. ..+.||++|||+|++++..+|+++|||+|+||||+|+++++||||
T Consensus       173 ~y~~~~~~l~~~ll~~la~~Lgl~~~~f~~~~~~~~~~~lRl~~YPp~p~~~~~~G~~~HtD~g~lTlL~q~~~v~GLQV  252 (357)
T PLN02216        173 TYSAEVKSIAKILFAKMASALEIKPEEMEKLFDDDLGQSIRMNYYPPCPQPDQVIGLTPHSDAVGLTILLQVNEVEGLQI  252 (357)
T ss_pred             HHHHHHHHHHHHHHHHHHHHcCCCHHHHHHHhccCchheeEEeecCCCCCcccccCccCcccCceEEEEEecCCCCceeE
Confidence            9999999999999999999999999999998876 457899999999999888999999999999999999657999999


Q ss_pred             eeCCeeEeCccCCCeEEEEcchhhHHHhCCcccCcccccccCCCCCccceeeeeCCCCCceEecCCCCCCCCCCCCCCcc
Q 018035          250 KKDGLWVPIKALPDAFIINIGDALEIVTNGSYPSIEHRATINSEKERISIATFYTPKLDGEIGPAPSLMKPETPGLFKKI  329 (362)
Q Consensus       250 ~~~g~W~~V~p~~g~~vVnvGd~L~~~TnG~~ks~~HRVv~~~~~~R~Si~~F~~P~~d~~i~pl~~~~~~~~~~~y~~~  329 (362)
                      +.+|+|++|+|.+|++|||+||+||+||||+|||+.|||+.++.++||||+||++|+.|++|.|+++++++++|++|+++
T Consensus       253 ~~~g~Wi~V~p~pgalvVNiGD~L~~~TNG~~kS~~HRVv~~~~~~R~Si~~F~~P~~d~~i~p~~~lv~~~~p~~Y~~~  332 (357)
T PLN02216        253 KKDGKWVSVKPLPNALVVNVGDILEIITNGTYRSIEHRGVVNSEKERLSVATFHNTGMGKEIGPAKSLVERQKAALFKSL  332 (357)
T ss_pred             EECCEEEECCCCCCeEEEEcchhhHhhcCCeeeccCceeecCCCCCEEEEEEEecCCCCCeEeCcHHHcCCCCCCCCCCc
Confidence            99999999999999999999999999999999999999998888899999999999999999999999999999999999


Q ss_pred             cHHHHHHHHHhhhcCcccccccccc
Q 018035          330 TFGDYLKGYLARELHAKSYIDNFRI  354 (362)
Q Consensus       330 ~~~e~~~~~~~~~~~~~~~~~~~~~  354 (362)
                      +++||++.++.+...++..++.++|
T Consensus       333 t~~ey~~~~~~~~~~~~~~~~~~~~  357 (357)
T PLN02216        333 TTKEYFDGLFSRELDGKAYLDAMRI  357 (357)
T ss_pred             CHHHHHHHHHhcccCCcchhhhhcC
Confidence            9999999999999889888887765

>PLN02758 oxidoreductase, 2OG-Fe(II) oxygenase family protein Back     alignment and domain information
>PLN02947 oxidoreductase Back     alignment and domain information
>PLN02393 leucoanthocyanidin dioxygenase like protein Back     alignment and domain information
>PLN03178 leucoanthocyanidin dioxygenase; Provisional Back     alignment and domain information
>PLN02904 oxidoreductase Back     alignment and domain information
>PLN02254 gibberellin 3-beta-dioxygenase Back     alignment and domain information
>PLN02912 oxidoreductase, 2OG-Fe(II) oxygenase family protein Back     alignment and domain information
>PLN02639 oxidoreductase, 2OG-Fe(II) oxygenase family protein Back     alignment and domain information
>PLN02276 gibberellin 20-oxidase Back     alignment and domain information
>PLN00417 oxidoreductase, 2OG-Fe(II) oxygenase family protein Back     alignment and domain information
>PLN02515 naringenin,2-oxoglutarate 3-dioxygenase Back     alignment and domain information
>PLN02704 flavonol synthase Back     alignment and domain information
>PLN02750 oxidoreductase, 2OG-Fe(II) oxygenase family protein Back     alignment and domain information
>PLN02997 flavonol synthase Back     alignment and domain information
>PLN02299 1-aminocyclopropane-1-carboxylate oxidase Back     alignment and domain information
>PTZ00273 oxidase reductase; Provisional Back     alignment and domain information
>KOG0143 consensus Iron/ascorbate family oxidoreductases [Secondary metabolites biosynthesis, transport and catabolism; General function prediction only] Back     alignment and domain information
>PLN02485 oxidoreductase Back     alignment and domain information
>PLN02156 gibberellin 2-beta-dioxygenase Back     alignment and domain information
>PLN03002 oxidoreductase, 2OG-Fe(II) oxygenase family protein Back     alignment and domain information
>COG3491 PcbC Isopenicillin N synthase and related dioxygenases [General function prediction only] Back     alignment and domain information
>PLN02365 2-oxoglutarate-dependent dioxygenase Back     alignment and domain information
>PLN02403 aminocyclopropanecarboxylate oxidase Back     alignment and domain information
>PLN02984 oxidoreductase, 2OG-Fe(II) oxygenase family protein Back     alignment and domain information
>PLN03001 oxidoreductase, 2OG-Fe(II) oxygenase family protein Back     alignment and domain information
>PF03171 2OG-FeII_Oxy: 2OG-Fe(II) oxygenase superfamily Entry for Lysyl hydrolases This Prosite entry is a sub-family of the Pfam entry; InterPro: IPR005123 This domain is found in members of the 2-oxoglutarate (2OG) and Fe(II)-dependent oxygenase superfamily [], as well as the C-terminal of prolyl 4-hydroxylase alpha subunit Back     alignment and domain information
>PF14226 DIOX_N: non-haem dioxygenase in morphine synthesis N-terminal; PDB: 3OOX_A 1BK0_A 1IPS_B 1QIQ_A 1OC1_A 2Y86_A 2Y60_A 1W03_A 2VE1_A 1QJF_A Back     alignment and domain information
>PLN03176 flavanone-3-hydroxylase; Provisional Back     alignment and domain information
>PF13640 2OG-FeII_Oxy_3: 2OG-Fe(II) oxygenase superfamily; PDB: 3DKQ_B 3GZE_D 3HQR_A 2Y34_A 2G1M_A 2G19_A 3OUI_A 3OUJ_A 2HBU_A 2Y33_A Back     alignment and domain information
>PRK05467 Fe(II)-dependent oxygenase superfamily protein; Provisional Back     alignment and domain information
>smart00702 P4Hc Prolyl 4-hydroxylase alpha subunit homologues Back     alignment and domain information
>PF12851 Tet_JBP: Oxygenase domain of the 2OGFeDO superfamily ; InterPro: IPR024779 TETs are 2OG- and Fe(II)-dependent oxygenases that catalyse the conversion of 5 methyl-Cytosine (5-MC) to 5-hydroxymethyl-cytosine (hmC) in cultured cells and in vitro [] Back     alignment and domain information
>PRK15401 alpha-ketoglutarate-dependent dioxygenase AlkB; Provisional Back     alignment and domain information
>PF13532 2OG-FeII_Oxy_2: 2OG-Fe(II) oxygenase superfamily; PDB: 2IUW_A 3BTZ_A 3RZL_A 3RZH_A 3S5A_A 3RZG_A 3RZJ_A 3BUC_A 3H8X_A 3H8R_A Back     alignment and domain information

Homologous Structure Templates

Structure Templates Detected by BLAST ?

Original result of BLAST against Protein Data Bank

ID ?Alignment Graph ?Length ? Definition ? E-value ?
Query362
2brt_A355 Anthocyanidin Synthase From Arabidopsis Thaliana Co 1e-52
1gp5_A356 Anthocyanidin Synthase From Arabidopsis Thaliana Co 1e-52
1gp4_A356 Anthocyanidin Synthase From Arabidopsis Thaliana (S 3e-51
1w9y_A319 The Structure Of Acc Oxidase Length = 319 1e-40
3oox_A312 Crystal Structure Of A Putative 2og-Fe(Ii) Oxygenas 2e-19
3on7_A280 Crystal Structure Of A Putative Oxygenase (So_2589) 1e-13
1ips_A331 Isopenicillin N Synthase From Aspergillus Nidulans 3e-08
2bjs_A325 Isopenicillin N Synthase C-Terminal Truncation Muta 3e-08
1w28_A331 Conformational Flexibility Of The C-Terminus With I 9e-07
1e5h_A308 Delta-R307a Deacetoxycephalosporin C Synthase Compl 9e-07
1unb_A311 Deacetoxycephalosporin C Synthase Complexed With 2- 1e-06
1e5i_A306 Delta-R306 Deacetoxycephalosporin C Synthase Comple 1e-06
1hjf_A311 Alteration Of The Co-Substrate Selectivity Of Deace 1e-06
>pdb|2BRT|A Chain A, Anthocyanidin Synthase From Arabidopsis Thaliana Complexed With Naringenin Length = 355 Back     alignment and structure 
Iteration: 1

 Score =  203 bits (517), Expect = 1e-52,   Method: Compositional matrix adjust.
 Identities = 119/342 (34%), Positives = 184/342 (53%), Gaps = 15/342 (4%)
Query: 12  LPVPCVQDLAKKPLTNVPPQYIRADQESPFICNADL------AANVPVIDMSKLLSAD-- 63
           + V  V+ LAK  + ++P +YIR  +E   I +  L         VP ID+  + S D  
Sbjct: 1   VAVERVESLAKSGIISIPKEYIRPKEELESINDVFLEEKKEDGPQVPTIDLKNIESDDEK 60
Query: 64  FMDSELHKFHHACKEWGFFQLINHGVSNSLIEKMKVEIPNFFNLPMEEKKKYW--QQPGD 121
             ++ + +   A  +WG   LINHG+   L+E++K     FF+L +EEK+KY   Q  G 
Sbjct: 61  IRENCIEELKKASLDWGVMHLINHGIPADLMERVKKAGEEFFSLSVEEKEKYANDQATGK 120
Query: 122 IQGFGQAFVVSEEQKLDWADMFAMYTLPTYLRKPHLFPKLPVHFRDTLESYSAELRNLAL 181
           IQG+G     +   +L+W D F     P   R   ++PK P  + +    Y+  LR LA 
Sbjct: 121 IQGYGSKLANNASGQLEWEDYFFHLAYPEEKRDLSIWPKTPSDYIEATSEYAKCLRLLAT 180
Query: 182 KILYQMAKALKMDPNDIKDL---FEEGVQIMRMNYYPPCPQPKLVMGLTPHSDAGGLTIL 238
           K+   ++  L ++P+ ++      EE +  M++NYYP CPQP+L +G+  H+D   LT +
Sbjct: 181 KVFKALSVGLGLEPDRLEKEVGGLEELLLQMKINYYPKCPQPELALGVEAHTDVSALTFI 240
Query: 239 LQINEMDGLQIKKDGLWVPIKALPDAFIINIGDALEIVTNGSYPSIEHRATINSEKERIS 298
           L  N + GLQ+  +G WV  K +PD+ +++IGD LEI++NG Y SI HR  +N EK RIS
Sbjct: 241 LH-NMVPGLQLFYEGKWVTAKCVPDSIVMHIGDTLEILSNGKYKSILHRGLVNKEKVRIS 299
Query: 299 IATFYTPKLDGEI-GPAPSLMKPETPGLFKKITFGDYLKGYL 339
            A F  P  D  +  P P ++  E+P  F   TF  +++  L
Sbjct: 300 WAVFCEPPKDKIVLKPLPEMVSVESPAKFPPRTFAQHIEHKL 341
>pdb|1GP5|A Chain A, Anthocyanidin Synthase From Arabidopsis Thaliana Complexed With Trans-Dihydroquercetin Length = 356 Back     alignment and structure
>pdb|1GP4|A Chain A, Anthocyanidin Synthase From Arabidopsis Thaliana (Selenomethionine Substituted) Length = 356 Back     alignment and structure
>pdb|1W9Y|A Chain A, The Structure Of Acc Oxidase Length = 319 Back     alignment and structure
>pdb|3OOX|A Chain A, Crystal Structure Of A Putative 2og-Fe(Ii) Oxygenase Family Protein (Cc_0200) From Caulobacter Crescentus At 1.44 A Resolution Length = 312 Back     alignment and structure
>pdb|3ON7|A Chain A, Crystal Structure Of A Putative Oxygenase (So_2589) From Shewanella Oneidensis At 2.20 A Resolution Length = 280 Back     alignment and structure
>pdb|1IPS|A Chain A, Isopenicillin N Synthase From Aspergillus Nidulans (Manganese Complex) Length = 331 Back     alignment and structure
>pdb|2BJS|A Chain A, Isopenicillin N Synthase C-Terminal Truncation Mutant Length = 325 Back     alignment and structure
>pdb|1W28|A Chain A, Conformational Flexibility Of The C-Terminus With Implications For Substrate Binding And Catalysis In A New Crystal Form Of Deacetoxycephalosporin C Synthase Length = 331 Back     alignment and structure
>pdb|1E5H|A Chain A, Delta-R307a Deacetoxycephalosporin C Synthase Complexed With Succinate And Carbon Dioxide Length = 308 Back     alignment and structure
>pdb|1UNB|A Chain A, Deacetoxycephalosporin C Synthase Complexed With 2-Oxoglutarate And Ampicillin Length = 311 Back     alignment and structure
>pdb|1E5I|A Chain A, Delta-R306 Deacetoxycephalosporin C Synthase Complexed With Iron And 2-Oxoglutarate Length = 306 Back     alignment and structure
>pdb|1HJF|A Chain A, Alteration Of The Co-Substrate Selectivity Of Deacetoxycephalosporin C Synthase: The Role Of Arginine-258 Length = 311 Back     alignment and structure

Structure Templates Detected by RPS-BLAST ?

Original result of RPS-BLAST against PDB70 database

ID ?Alignment Graph ?Length ? Definition ? E-value ?
Query362
1gp6_A356 Leucoanthocyanidin dioxygenase; 2-oxoglutarate dep 1e-167
1w9y_A319 1-aminocyclopropane-1-carboxylate oxidase 1; oxyge 1e-153
1dcs_A311 Deacetoxycephalosporin C synthase; ferrous oxygena 1e-101
1odm_A331 Isopenicillin N synthase; antibiotic biosynthesis, 4e-87
3on7_A280 Oxidoreductase, iron/ascorbate family; structural 1e-80
3oox_A312 Putative 2OG-Fe(II) oxygenase family protein; stru 1e-74
1vt4_I 1221 APAF-1 related killer DARK; drosophila apoptosome, 2e-07
>1gp6_A Leucoanthocyanidin dioxygenase; 2-oxoglutarate dependent dioxygenase, flavonoid biosynthesis; HET: MES QUE DH2; 1.75A {Arabidopsis thaliana} SCOP: b.82.2.1 PDB: 1gp5_A* 1gp4_A* 2brt_A* Length = 356 Back     alignment and structure
 Score =  469 bits (1210), Expect = e-167
 Identities = 122/360 (33%), Positives = 189/360 (52%), Gaps = 19/360 (5%)

Query: 12  LPVPCVQDLAKKPLTNVPPQYIRADQESPFICNADLAA------NVPVIDMSKLLSADFM 65
           + V  V+ LAK  + ++P +YIR  +E   I +  L         VP ID+  + S D  
Sbjct: 2   VAVERVESLAKSGIISIPKEYIRPKEELESINDVFLEEKKEDGPQVPTIDLKNIESDDEK 61

Query: 66  DSE--LHKFHHACKEWGFFQLINHGVSNSLIEKMKVEIPNFFNLPMEEKKKYW--QQPGD 121
             E  + +   A  +WG   LINHG+   L+E++K     FF+L +EEK+KY   Q  G 
Sbjct: 62  IRENCIEELKKASLDWGVMHLINHGIPADLMERVKKAGEEFFSLSVEEKEKYANDQATGK 121

Query: 122 IQGFGQAFVVSEEQKLDWADMFAMYTLPTYLRKPHLFPKLPVHFRDTLESYSAELRNLAL 181
           IQG+G     +   +L+W D F     P   R   ++PK P  + +    Y+  LR LA 
Sbjct: 122 IQGYGSKLANNASGQLEWEDYFFHLAYPEEKRDLSIWPKTPSDYIEATSEYAKCLRLLAT 181

Query: 182 KILYQMAKALKMDPNDIKDLF---EEGVQIMRMNYYPPCPQPKLVMGLTPHSDAGGLTIL 238
           K+   ++  L ++P+ ++      EE +  M++NYYP CPQP+L +G+  H+D   LT +
Sbjct: 182 KVFKALSVGLGLEPDRLEKEVGGLEELLLQMKINYYPKCPQPELALGVEAHTDVSALTFI 241

Query: 239 LQINEMDGLQIKKDGLWVPIKALPDAFIINIGDALEIVTNGSYPSIEHRATINSEKERIS 298
           L  N + GLQ+  +G WV  K +PD+ +++IGD LEI++NG Y SI HR  +N EK RIS
Sbjct: 242 LH-NMVPGLQLFYEGKWVTAKCVPDSIVMHIGDTLEILSNGKYKSILHRGLVNKEKVRIS 300

Query: 299 IATFYTPKLDG-EIGPAPSLMKPETPGLFKKITFGDYLKGYLARELHAKSYIDNFRIRNE 357
            A F  P  D   + P P ++  E+P  F   TF  +++     +L  K   +    +N+
Sbjct: 301 WAVFCEPPKDKIVLKPLPEMVSVESPAKFPPRTFAQHIE----HKLFGKEQEELVSEKND 356
>1w9y_A 1-aminocyclopropane-1-carboxylate oxidase 1; oxygenase, 2OG oxygenase, ACCO, ACC oxidase; 2.1A {Petunia hybrida} SCOP: b.82.2.1 PDB: 1wa6_X Length = 319 Back     alignment and structure
>1dcs_A Deacetoxycephalosporin C synthase; ferrous oxygenase, 2-oxoglutarate, oxidoreduc antibiotics, merohedral twinning; 1.30A {Streptomyces clavuligerus} SCOP: b.82.2.1 PDB: 1rxf_A 1rxg_A* 1unb_A* 1uo9_A 1uob_A* 1uof_A* 1uog_A* 2jb8_A 1w28_A 1w2a_X 1w2n_A* 1w2o_A* 1hjg_A 1hjf_A 1e5h_A 1e5i_A* Length = 311 Back     alignment and structure
>1odm_A Isopenicillin N synthase; antibiotic biosynthesis, B-lactam antibiotic, oxygenase, penicillin biosynthesis, oxidoreductase, iron; HET: ASV; 1.15A {Emericella nidulans} SCOP: b.82.2.1 PDB: 1blz_A* 1hb1_A* 1hb2_A* 1hb3_A* 1hb4_A* 1ips_A 1obn_A* 1oc1_A* 1bk0_A* 1odn_A* 1qiq_A* 1qje_A* 1qjf_A* 1uzw_A* 1w03_A* 1w04_A* 1w05_A* 1w06_A* 1w3v_A* 1w3x_A* ... Length = 331 Back     alignment and structure
>3on7_A Oxidoreductase, iron/ascorbate family; structural genomics, joint center for structural genomics, J protein structure initiative; 2.20A {Shewanella oneidensis} Length = 280 Back     alignment and structure
>3oox_A Putative 2OG-Fe(II) oxygenase family protein; structural genomics, joint center for structural genomics; HET: MSE; 1.44A {Caulobacter crescentus CB15} Length = 312 Back     alignment and structure
>1vt4_I APAF-1 related killer DARK; drosophila apoptosome, apoptosis, programmed cell death; HET: DTP; 6.90A {Drosophila melanogaster} PDB: 3iz8_A* Length = 1221 Back     alignment and structure

Structure Templates Detected by HHsearch ?

Original result of HHsearch against PDB70 database

ID ?Alignment Graph ?Length ? Definition ? Probability ?
Query362
1gp6_A356 Leucoanthocyanidin dioxygenase; 2-oxoglutarate dep 100.0
1w9y_A319 1-aminocyclopropane-1-carboxylate oxidase 1; oxyge 100.0
3oox_A312 Putative 2OG-Fe(II) oxygenase family protein; stru 100.0
1odm_A331 Isopenicillin N synthase; antibiotic biosynthesis, 100.0
1dcs_A311 Deacetoxycephalosporin C synthase; ferrous oxygena 100.0
3on7_A280 Oxidoreductase, iron/ascorbate family; structural 100.0
3dkq_A243 PKHD-type hydroxylase SBAL_3634; putative oxygenas 95.49
2rg4_A216 Uncharacterized protein; rhodobacterales, oceanico 91.93
2hbt_A247 EGL nine homolog 1; prolyl hydroxylase, hypoxia in 91.4
2jig_A224 Prolyl-4 hydroxylase; hydrolase; HET: PD2; 1.85A { 81.82
3itq_A216 Prolyl 4-hydroxylase, alpha subunit domain protei; 80.6
>1gp6_A Leucoanthocyanidin dioxygenase; 2-oxoglutarate dependent dioxygenase, flavonoid biosynthesis; HET: MES QUE DH2; 1.75A {Arabidopsis thaliana} SCOP: b.82.2.1 PDB: 1gp5_A* 1gp4_A* 2brt_A* Back     alignment and structure
Probab=100.00  E-value=3.6e-81  Score=603.93  Aligned_cols=334  Identities=35%  Similarity=0.644  Sum_probs=301.5

Q ss_pred             CccchHHHhhCCCCCCCCCCCCCCCCCCcccC---CC---CCCCcceEeCCCCCCCChh--hHHHHHHHHHHHhcceEEE
Q 018035           13 PVPCVQDLAKKPLTNVPPQYIRADQESPFICN---AD---LAANVPVIDMSKLLSADFM--DSELHKFHHACKEWGFFQL   84 (362)
Q Consensus        13 ~~~~~~~~~~~~~~~~p~~~~~~~~~~~~~~~---~~---~~~~IPvIDls~l~~~d~~--~~~~~~l~~A~~~~Gff~l   84 (362)
                      ++++||+|+++++.+||..|++|+++++.++.   ..   ...+||||||+.+.+++..  .+.+++|.+||+++|||||
T Consensus         3 ~~~~v~~l~~~~~~~vP~~~~~p~~~~~~~~~~~~~~~~~~~~~iPvIDls~l~~~~~~~~~~~~~~l~~A~~~~GFF~v   82 (356)
T 1gp6_A            3 AVERVESLAKSGIISIPKEYIRPKEELESINDVFLEEKKEDGPQVPTIDLKNIESDDEKIRENCIEELKKASLDWGVMHL   82 (356)
T ss_dssp             CCCCHHHHHHTTCSSCCGGGSCCHHHHTTCCCHHHHHHCCCSCCCCEEECTTTTCSCHHHHHHHHHHHHHHHHHTSEEEE
T ss_pred             CcccHHHHHhcCCCCCCHHhcCCchhcccccccccccccccCCCCCEEEchhccCCChHHHHHHHHHHHHHHHhCCEEEE
Confidence            57889999999999999999999888765321   00   1246999999999766543  2467999999999999999


Q ss_pred             EecCCCHHHHHHHHHHhhhhcCCCHHHHhhhccCC--CCccccccccccccccccccccccccccCCCCCCCCCCCCCCC
Q 018035           85 INHGVSNSLIEKMKVEIPNFFNLPMEEKKKYWQQP--GDIQGFGQAFVVSEEQKLDWADMFAMYTLPTYLRKPHLFPKLP  162 (362)
Q Consensus        85 ~nhGi~~~l~~~~~~~~~~fF~lp~e~K~~~~~~~--~~~~Gy~~~~~~~~~~~~d~~e~~~~~~~p~~~~~~~~wP~~~  162 (362)
                      +||||+.++++++++.+++||+||.|+|+++....  ..++||+........+..||+|.|+++..|.....+|.||+.+
T Consensus        83 ~nHGi~~~l~~~~~~~~~~FF~lP~eeK~~~~~~~~~~~~~Gy~~~~~~~~~~~~d~kE~~~~~~~p~~~~~~~~wP~~~  162 (356)
T 1gp6_A           83 INHGIPADLMERVKKAGEEFFSLSVEEKEKYANDQATGKIQGYGSKLANNASGQLEWEDYFFHLAYPEEKRDLSIWPKTP  162 (356)
T ss_dssp             ESCSCCHHHHHHHHHHHHHHHTSCHHHHGGGBCBGGGTBCSEEECCCCCSTTCCCCSCEEEEEEEESGGGCCGGGSCCSS
T ss_pred             eCCCCCHHHHHHHHHHHHHHHCCCHHHHHhhcccccccCccccCcCcccCCCCCCChhheeeeecCCccccccccCCCcc
Confidence            99999999999999999999999999999998754  3689998766555566789999999987665445789999999


Q ss_pred             chHHHHHHHHHHHHHHHHHHHHHHHHHhCCCChhhHHHhhh---ccceeeEEeecCCCCCCCccccccccccCCceEEEE
Q 018035          163 VHFRDTLESYSAELRNLALKILYQMAKALKMDPNDIKDLFE---EGVQIMRMNYYPPCPQPKLVMGLTPHSDAGGLTILL  239 (362)
Q Consensus       163 ~~fr~~~~~y~~~~~~la~~ll~~l~~~Lgl~~~~~~~~~~---~~~~~lrl~~Yp~~~~~~~~~g~~~HtD~~~lTiL~  239 (362)
                      +.|++.+++|+++|.+++.+|+++|+++||+++++|.+.+.   .+.+.||++|||+|++++..+|+++|||+|+||||+
T Consensus       163 ~~fr~~~~~y~~~~~~l~~~ll~~la~~Lgl~~~~f~~~~~~~~~~~~~lrl~~YPp~~~~~~~~g~~~HtD~g~lTlL~  242 (356)
T 1gp6_A          163 SDYIEATSEYAKCLRLLATKVFKALSVGLGLEPDRLEKEVGGLEELLLQMKINYYPKCPQPELALGVEAHTDVSALTFIL  242 (356)
T ss_dssp             TTHHHHHHHHHHHHHHHHHHHHHHHHHHTTSCTTHHHHHTTHHHHCEEEEEEEEECCCSSTTTCCSEEEECCCSSEEEEE
T ss_pred             hhhhHHHHHHHHHHHHHHHHHHHHHHHHcCCCHHHHHHHhcccCCccceeeeeecCCCCCcccccCcCCccCCCeEEEEE
Confidence            99999999999999999999999999999999999999987   468899999999999888889999999999999999


Q ss_pred             ecCCCCCeeeeeCCeeEeCccCCCeEEEEcchhhHHHhCCcccCcccccccCCCCCccceeeeeCCCCCc-eEecCCCCC
Q 018035          240 QINEMDGLQIKKDGLWVPIKALPDAFIINIGDALEIVTNGSYPSIEHRATINSEKERISIATFYTPKLDG-EIGPAPSLM  318 (362)
Q Consensus       240 q~~~~~GLqV~~~g~W~~V~p~~g~~vVnvGd~L~~~TnG~~ks~~HRVv~~~~~~R~Si~~F~~P~~d~-~i~pl~~~~  318 (362)
                      | ++++||||+++|+|++|+|.+|++|||+||+||+||||+|||+.|||+.++.++|||++||++|+.|+ +|.|+++++
T Consensus       243 q-d~v~GLQV~~~g~Wi~V~p~pgalvVNiGD~l~~~TnG~~kS~~HRVv~~~~~~R~Sia~F~~P~~d~~~i~pl~~~~  321 (356)
T 1gp6_A          243 H-NMVPGLQLFYEGKWVTAKCVPDSIVMHIGDTLEILSNGKYKSILHRGLVNKEKVRISWAVFCEPPKDKIVLKPLPEMV  321 (356)
T ss_dssp             E-CSCCCEEEEETTEEEECCCCTTCEEEEECHHHHHHTTTSSCCCCEEECCCSSCCEEEEEEEEECCTTTCEECCCGGGC
T ss_pred             E-cCCCCeEEecCCcEEECcCCCCeEEEEeccHHHHhcCCEeeccCceecCCCCCCEEEEEEeecCCCCCcEEeCChhhc
Confidence            9 57999999999999999999999999999999999999999999999998888999999999999999 999999999


Q ss_pred             CCCCCCCCCcccHHHHHHHHHhhhcCccc
Q 018035          319 KPETPGLFKKITFGDYLKGYLARELHAKS  347 (362)
Q Consensus       319 ~~~~~~~y~~~~~~e~~~~~~~~~~~~~~  347 (362)
                      ++++|++|++++++||+..+++.+++|+.
T Consensus       322 ~~~~p~~y~~~t~~eyl~~~~~~~~d~~~  350 (356)
T 1gp6_A          322 SVESPAKFPPRTFAQHIEHKLFGKEQEEL  350 (356)
T ss_dssp             CSSSCCSSCCEEHHHHHHHHHHHHHHHHC
T ss_pred             CCCCCccCCCccHHHHHHHHHHhccCcch
Confidence            99899999999999999999999887765
>1w9y_A 1-aminocyclopropane-1-carboxylate oxidase 1; oxygenase, 2OG oxygenase, ACCO, ACC oxidase; 2.1A {Petunia hybrida} SCOP: b.82.2.1 PDB: 1wa6_X Back     alignment and structure
>3oox_A Putative 2OG-Fe(II) oxygenase family protein; structural genomics, joint center for structural genomics; HET: MSE; 1.44A {Caulobacter crescentus CB15} Back     alignment and structure
>1odm_A Isopenicillin N synthase; antibiotic biosynthesis, B-lactam antibiotic, oxygenase, penicillin biosynthesis, oxidoreductase, iron; HET: ASV; 1.15A {Emericella nidulans} SCOP: b.82.2.1 PDB: 1blz_A* 1hb1_A* 1hb2_A* 1hb3_A* 1hb4_A* 1ips_A 1obn_A* 1oc1_A* 1bk0_A* 1odn_A* 1qiq_A* 1qje_A* 1qjf_A* 1uzw_A* 1w03_A* 1w04_A* 1w05_A* 1w06_A* 1w3v_A* 1w3x_A* ... Back     alignment and structure
>1dcs_A Deacetoxycephalosporin C synthase; ferrous oxygenase, 2-oxoglutarate, oxidoreduc antibiotics, merohedral twinning; 1.30A {Streptomyces clavuligerus} SCOP: b.82.2.1 PDB: 1rxf_A 1rxg_A* 1unb_A* 1uo9_A 1uob_A* 1uof_A* 1uog_A* 2jb8_A 1w28_A 1w2a_X 1w2n_A* 1w2o_A* 1hjg_A 1hjf_A 1e5h_A 1e5i_A* Back     alignment and structure
>3on7_A Oxidoreductase, iron/ascorbate family; structural genomics, joint center for structural genomics, J protein structure initiative; 2.20A {Shewanella oneidensis} Back     alignment and structure
>3dkq_A PKHD-type hydroxylase SBAL_3634; putative oxygenase, structural genomics, JOI for structural genomics, JCSG; 2.26A {Shewanella baltica OS155} Back     alignment and structure
>2rg4_A Uncharacterized protein; rhodobacterales, oceanicola granulosus HTCC2516, Q2CBJ1_9RHO structural genomics, PSI-2; 1.90A {Oceanicola granulosus} PDB: 3bvc_A Back     alignment and structure
>2hbt_A EGL nine homolog 1; prolyl hydroxylase, hypoxia inducible factor, HIF, 2- oxoglutarate, oxygenase, oxidoreductase; HET: UN9; 1.60A {Homo sapiens} PDB: 2hbu_A* 2g1m_A* 3hqu_A* 3hqr_A* 2y33_A* 2y34_A* 2g19_A* 3ouj_A* 3ouh_A* 3oui_A* Back     alignment and structure
>2jig_A Prolyl-4 hydroxylase; hydrolase; HET: PD2; 1.85A {Chlamydomonas reinhardtii} PDB: 3gze_A 2v4a_A 2jij_A Back     alignment and structure
>3itq_A Prolyl 4-hydroxylase, alpha subunit domain protei; double-stranded beta helix, alpha-keto dependent non-heme iron oxygenase; 1.40A {Bacillus anthracis str} Back     alignment and structure

Homologous Structure Domains

Structure Domains Detected by RPS-BLAST ?

Original result of RPS-BLAST against SCOP70(version1.75) database

ID ?Alignment Graph ?Length ? Definition ? E-value ?
Query 362
d1gp6a_349 b.82.2.1 (A:) Anthocyanidin synthase {Mouse-ear cr 6e-79
d1w9ya1307 b.82.2.1 (A:2-308) 1-aminocyclopropane-1-carboxyla 9e-68
d1dcsa_311 b.82.2.1 (A:) Deacetoxycephalosporin C synthase {S 1e-59
d1odma_329 b.82.2.1 (A:) Isopenicillin N synthase {Emericella 3e-48
>d1gp6a_ b.82.2.1 (A:) Anthocyanidin synthase {Mouse-ear cress (Arabidopsis thaliana) [TaxId: 3702]} Length = 349 Back     information, alignment and structure

class: All beta proteins
fold: Double-stranded beta-helix
superfamily: Clavaminate synthase-like
family: Penicillin synthase-like
domain: Anthocyanidin synthase
species: Mouse-ear cress (Arabidopsis thaliana) [TaxId: 3702]

 Score =  243 bits (621), Expect = 6e-79
 Identities = 118/347 (34%), Positives = 182/347 (52%), Gaps = 15/347 (4%)

Query: 12  LPVPCVQDLAKKPLTNVPPQYIRADQESPFICNADLAA------NVPVIDMSKLLSADFM 65
           + V  V+ LAK  + ++P +YIR  +E   I +  L         VP ID+  + S D  
Sbjct: 1   VAVERVESLAKSGIISIPKEYIRPKEELESINDVFLEEKKEDGPQVPTIDLKNIESDDEK 60

Query: 66  DSE--LHKFHHACKEWGFFQLINHGVSNSLIEKMKVEIPNFFNLPMEEKKKYWQQP--GD 121
             E  + +   A  +WG   LINHG+   L+E++K     FF+L +EEK+KY      G 
Sbjct: 61  IRENCIEELKKASLDWGVMHLINHGIPADLMERVKKAGEEFFSLSVEEKEKYANDQATGK 120

Query: 122 IQGFGQAFVVSEEQKLDWADMFAMYTLPTYLRKPHLFPKLPVHFRDTLESYSAELRNLAL 181
           IQG+G     +   +L+W D F     P   R   ++PK P  + +    Y+  LR LA 
Sbjct: 121 IQGYGSKLANNASGQLEWEDYFFHLAYPEEKRDLSIWPKTPSDYIEATSEYAKCLRLLAT 180

Query: 182 KILYQMAKALKMDPNDIKDLF---EEGVQIMRMNYYPPCPQPKLVMGLTPHSDAGGLTIL 238
           K+   ++  L ++P+ ++      EE +  M++NYYP CPQP+L +G+  H+D   LT  
Sbjct: 181 KVFKALSVGLGLEPDRLEKEVGGLEELLLQMKINYYPKCPQPELALGVEAHTDVSALT-F 239

Query: 239 LQINEMDGLQIKKDGLWVPIKALPDAFIINIGDALEIVTNGSYPSIEHRATINSEKERIS 298
           +  N + GLQ+  +G WV  K +PD+ +++IGD LEI++NG Y SI HR  +N EK RIS
Sbjct: 240 ILHNMVPGLQLFYEGKWVTAKCVPDSIVMHIGDTLEILSNGKYKSILHRGLVNKEKVRIS 299

Query: 299 IATFYTPKLDGEI-GPAPSLMKPETPGLFKKITFGDYLKGYLARELH 344
            A F  P  D  +  P P ++  E+P  F   TF  +++  L  +  
Sbjct: 300 WAVFCEPPKDKIVLKPLPEMVSVESPAKFPPRTFAQHIEHKLFGKEQ 346
>d1w9ya1 b.82.2.1 (A:2-308) 1-aminocyclopropane-1-carboxylate oxidase 1 {Petunia hybrida [TaxId: 4102]} Length = 307 Back     information, alignment and structure
>d1dcsa_ b.82.2.1 (A:) Deacetoxycephalosporin C synthase {Streptomyces clavuligerus [TaxId: 1901]} Length = 311 Back     information, alignment and structure
>d1odma_ b.82.2.1 (A:) Isopenicillin N synthase {Emericella nidulans [TaxId: 162425]} Length = 329 Back     information, alignment and structure

Homologous Domains Detected by HHsearch ?

Original result of HHsearch against SCOP70(version1.75) database

ID ?Alignment Graph ?Length ? Definition ? Probability ?
Query362
d1gp6a_349 Anthocyanidin synthase {Mouse-ear cress (Arabidops 100.0
d1w9ya1307 1-aminocyclopropane-1-carboxylate oxidase 1 {Petun 100.0
d1odma_329 Isopenicillin N synthase {Emericella nidulans [Tax 100.0
d1dcsa_311 Deacetoxycephalosporin C synthase {Streptomyces cl 100.0
d2iuwa1210 AlkB homolog 3 {Human (Homo sapiens) [TaxId: 9606] 88.87
d2fdia1200 Alkylated DNA repair protein AlkB {Escherichia col 86.86
>d1gp6a_ b.82.2.1 (A:) Anthocyanidin synthase {Mouse-ear cress (Arabidopsis thaliana) [TaxId: 3702]} Back     information, alignment and structure
class: All beta proteins
fold: Double-stranded beta-helix
superfamily: Clavaminate synthase-like
family: Penicillin synthase-like
domain: Anthocyanidin synthase
species: Mouse-ear cress (Arabidopsis thaliana) [TaxId: 3702]

Probab=100.00  E-value=1.9e-77  Score=575.48  Aligned_cols=328  Identities=35%  Similarity=0.654  Sum_probs=288.8

Q ss_pred             CccchHHHhhCCCCCCCCCCCCCCCCCCccc------CCCCCCCcceEeCCCCCCCChh--hHHHHHHHHHHHhcceEEE
Q 018035           13 PVPCVQDLAKKPLTNVPPQYIRADQESPFIC------NADLAANVPVIDMSKLLSADFM--DSELHKFHHACKEWGFFQL   84 (362)
Q Consensus        13 ~~~~~~~~~~~~~~~~p~~~~~~~~~~~~~~------~~~~~~~IPvIDls~l~~~d~~--~~~~~~l~~A~~~~Gff~l   84 (362)
                      .+.+||+|+++|+.+||+.|++|++++|.+.      ......+||||||+.+.+++..  +..+++|.+||+++|||||
T Consensus         2 ~~~~~~~~~~~~~~~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~IPvIDls~l~~~d~~~r~~~~~~l~~A~~~~GFf~l   81 (349)
T d1gp6a_           2 AVERVESLAKSGIISIPKEYIRPKEELESINDVFLEEKKEDGPQVPTIDLKNIESDDEKIRENCIEELKKASLDWGVMHL   81 (349)
T ss_dssp             CCCCHHHHHHTTCSSCCGGGSCCHHHHTTCCCHHHHHHCCCSCCCCEEECTTTTCSCHHHHHHHHHHHHHHHHHTSEEEE
T ss_pred             CCcchHHHHhCCCccCCHhhcCChhhcCCCCccccccccCCCCCcCeEEChhcCCCCHHHHHHHHHHHHHHHHhCCEEEE
Confidence            4678999999999999999999999988652      1244568999999999887764  2367999999999999999


Q ss_pred             EecCCCHHHHHHHHHHhhhhcCCCHHHHhhhccCC--CCccccccccccccccccccccccccccCCCCCCCCCCCCCCC
Q 018035           85 INHGVSNSLIEKMKVEIPNFFNLPMEEKKKYWQQP--GDIQGFGQAFVVSEEQKLDWADMFAMYTLPTYLRKPHLFPKLP  162 (362)
Q Consensus        85 ~nhGi~~~l~~~~~~~~~~fF~lp~e~K~~~~~~~--~~~~Gy~~~~~~~~~~~~d~~e~~~~~~~p~~~~~~~~wP~~~  162 (362)
                      +||||+.+++++++++++.||+||.|+|+++....  +.+.||+...........+|.+.+.....+.....+|.||+..
T Consensus        82 ~nHGI~~~li~~~~~~~~~FF~lP~eeK~k~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~n~wp~~~  161 (349)
T d1gp6a_          82 INHGIPADLMERVKKAGEEFFSLSVEEKEKYANDQATGKIQGYGSKLANNASGQLEWEDYFFHLAYPEEKRDLSIWPKTP  161 (349)
T ss_dssp             ESCSCCHHHHHHHHHHHHHHHTSCHHHHGGGBCBGGGTBCSEEECCCCCSTTCCCCSCEEEEEEEESGGGCCGGGSCCSS
T ss_pred             EccCCCHHHHHHHHHHHHHHHcCCHHHHhhhhcccccCCccccccccccccccccchhhhhccccccccccccccccccc
Confidence            99999999999999999999999999999997643  3455665544444445566665544433344456789999999


Q ss_pred             chHHHHHHHHHHHHHHHHHHHHHHHHHhCCCChhhHHHhhh---ccceeeEEeecCCCCCCCccccccccccCCceEEEE
Q 018035          163 VHFRDTLESYSAELRNLALKILYQMAKALKMDPNDIKDLFE---EGVQIMRMNYYPPCPQPKLVMGLTPHSDAGGLTILL  239 (362)
Q Consensus       163 ~~fr~~~~~y~~~~~~la~~ll~~l~~~Lgl~~~~~~~~~~---~~~~~lrl~~Yp~~~~~~~~~g~~~HtD~~~lTiL~  239 (362)
                      +.|++.+++|+++|..++.+|+++++++||+++++|.+.+.   ...+.||++|||+++.+...+|+++|||+|+||||+
T Consensus       162 ~~f~e~~~~~~~~~~~la~~ll~~la~~Lgl~~~~~~~~~~~~~~~~~~lrl~~Yp~~~~~~~~~g~~~HtD~g~lTlL~  241 (349)
T d1gp6a_         162 SDYIEATSEYAKCLRLLATKVFKALSVGLGLEPDRLEKEVGGLEELLLQMKINYYPKCPQPELALGVEAHTDVSALTFIL  241 (349)
T ss_dssp             TTHHHHHHHHHHHHHHHHHHHHHHHHHHTTSCTTHHHHHTTHHHHCEEEEEEEEECCCSSTTTCCSEEEECCCSSEEEEE
T ss_pred             chHHHHHHHHHHHHHHHHHhhhHHHHHHcCCCHHHHHHHhccccccceeeeecccccccchhhccccccCCCCcceEEEe
Confidence            99999999999999999999999999999999999998874   346799999999999888899999999999999999


Q ss_pred             ecCCCCCeeeeeCCeeEeCccCCCeEEEEcchhhHHHhCCcccCcccccccCCCCCccceeeeeCCCCCceE-ecCCCCC
Q 018035          240 QINEMDGLQIKKDGLWVPIKALPDAFIINIGDALEIVTNGSYPSIEHRATINSEKERISIATFYTPKLDGEI-GPAPSLM  318 (362)
Q Consensus       240 q~~~~~GLqV~~~g~W~~V~p~~g~~vVnvGd~L~~~TnG~~ks~~HRVv~~~~~~R~Si~~F~~P~~d~~i-~pl~~~~  318 (362)
                      | +.++||||+++|+|++|+|.+|++|||+||+||+||||+||||+|||+.+++++||||+||++|+.|++| .|||+|+
T Consensus       242 q-~~~~GLqv~~~g~W~~V~p~~~a~vVNvGD~l~~~TnG~~~St~HRVv~~~~~~R~Si~~F~~p~~d~~i~~pl~~~v  320 (349)
T d1gp6a_         242 H-NMVPGLQLFYEGKWVTAKCVPDSIVMHIGDTLEILSNGKYKSILHRGLVNKEKVRISWAVFCEPPKDKIVLKPLPEMV  320 (349)
T ss_dssp             E-CSCCCEEEEETTEEEECCCCTTCEEEEECHHHHHHTTTSSCCCCEEECCCSSCCEEEEEEEEECCTTTCEECCCGGGC
T ss_pred             c-cCCcceeeecCCceEEccCCCCCeeeeHHhHHHHHhCCCccCcCccccCCCCCCeEEEEEEecCCCcceeecCCHHHc
Confidence            9 6899999999999999999999999999999999999999999999999988999999999999999865 8999999


Q ss_pred             CCCCCCCCCcccHHHHHHHHHhh
Q 018035          319 KPETPGLFKKITFGDYLKGYLAR  341 (362)
Q Consensus       319 ~~~~~~~y~~~~~~e~~~~~~~~  341 (362)
                      ++++|++|++|+++||++.++.+
T Consensus       321 ~~~~p~~y~~~t~~e~~~~rl~~  343 (349)
T d1gp6a_         321 SVESPAKFPPRTFAQHIEHKLFG  343 (349)
T ss_dssp             CSSSCCSSCCEEHHHHHHHHHHH
T ss_pred             CCCCCCCCCCccHHHHHHHHHhc
Confidence            99999999999999999998844
>d1w9ya1 b.82.2.1 (A:2-308) 1-aminocyclopropane-1-carboxylate oxidase 1 {Petunia hybrida [TaxId: 4102]} Back     information, alignment and structure
>d1odma_ b.82.2.1 (A:) Isopenicillin N synthase {Emericella nidulans [TaxId: 162425]} Back     information, alignment and structure
>d1dcsa_ b.82.2.1 (A:) Deacetoxycephalosporin C synthase {Streptomyces clavuligerus [TaxId: 1901]} Back     information, alignment and structure
>d2iuwa1 b.82.2.10 (A:70-279) AlkB homolog 3 {Human (Homo sapiens) [TaxId: 9606]} Back     information, alignment and structure
>d2fdia1 b.82.2.10 (A:15-214) Alkylated DNA repair protein AlkB {Escherichia coli [TaxId: 562]} Back     information, alignment and structure