Citrus Sinensis ID: 018041

Local Sequence Feature Prediction

Prediction and (Method)Result
Residue Number Marker
Protein Sequence ?
Secondary Structure (PSIPRED) ?
Secondary Structure Prediction (SSPRO) ?
Coil and Loop (DISEMBL) ?
Flexible Loop (DISEMBL) ?
Low Complexity Region (SEG) ?
Disordered region (IsUnstruct) ?
Disordered Region (DISOPRED) ?
Disordered Region (DISEMBL) ?
Disordered Region (DISPRO) ?
Transmembrane Helix (TMHMM) ?
Transmembrane Helix (HMMTOP) ?
Transmembrane Helix (MEMSAT) ?
TM Helix, Signal Peptide (MEMSAT_SVM) ?
TM Helix, Signal Peptide (Phobius) ?
Signal Peptide (SignalP HMM Mode) ?
Signal Peptide (SignalP NN Mode) ?
Coiled Coils (COILS) ?
Positional Conservation ?
 
--------10--------20--------30--------40--------50--------60--------70--------80--------90-------100-------110-------120-------130-------140-------150-------160-------170-------180-------190-------200-------210-------220-------230-------240-------250-------260-------270-------280-------290-------300-------310-------320-------330-------340-------350-------360--
MAPSTLTALAGEKTLNPSFVRFQDERPKVAYNEFSNEIPVISLAGIDDVGGKRAEICKKIVEACEDWGIFQVVDHGVDAKLISDMTRLATEFFALPPEEKLKFDMSGGKKGGFIVSSHLQGEVVKDWREIVTYFSFPKQSRDYSRWPDKPEGWMEVTKEYSDKLMGVACKLLEVLSEAMGLEKEALTKACVDMDQKIVVNYYPKCPQPDLTLGLKRHTDPGTITLLLQDQVGGLQATKDNGKTWITVQPIEGAFVVNLGDHGHYLSNGRFKNADHQAVVNSNSSRLSIATFQNPAPEATVYPLKIREGEKPVLEEPIPFSEMYRRKMSKDLELARLKKLANERHQDSEKAKLGTKPIEEILA
cccccccHHccccccccccccccccccccccccccccccEEEccccccccccHHHHHHHHHHHHHHccEEEEEcccccHHHHHHHHHHHHHHHcccHHHHHccccccccEEEEEEcccccccccccccEEEEcccccccccccccccccccHHHHHHHHHHHHHHHHHHHHHHHHHHHccccHHHHHHHHccccEEEEEEcccccccccccccccccccccccEEEEccccccEEEEEcccccEEEEccccccEEEEcccEEEEEEcccccccccEEEccccccEEEEEEEEcccccccEEcccccccccccccccccHHHHHHHHHHcHHHHHHHHHHHHHHHHHHHHHHccccccccccc
cccccHHHHcccccccHHcEcccccccccccccccccccEEEccccccccHHHHHHHHHHHHHHHHcccEEEEcccccHHHHHHHHHHHHHHHcccHHHHHHHHcccccccEEEEEEEEEccccccHHHEEEEEEcccccccccccccccHHHHHHHHHHHHHHHHHHHHHHHHHHHHccccHHHHHHHHcccccEEEEEEEcccccccccccEEEEcccccEEEEEEcccccEEEEEccccEEEEEcccccEEEEEEccHEEEEccccEEEEEEEEEEEcccccEEEEEEcccccccEEccccccccccccccccccHHHHHHHHHcccccHHHHHHHHHHHHHHHHHHccccccHHHHcc
mapstltalagektlnpsfvrfqderpkvaynefsneipvislagiddvggKRAEICKKIVEACEDWGIFQVVDHGVDAKLISDMTRLATeffalppeeklkfdmsggkkggFIVSSHLQGEVVKDWREIVTYFsfpkqsrdysrwpdkpegwmEVTKEYSDKLMGVACKLLEVLSEAMGLEKEALTKACVDMDQKIvvnyypkcpqpdltlglkrhtdpgtITLLLQDQvgglqatkdngktwitvqpIEGAFVVNLgdhghylsngrfknadhqavvnsnssrlsiatfqnpapeatvyplkiregekpvleepipfseMYRRKMSKDLELARLKKLANerhqdsekaklgtkpIEEILA
mapstltalagektlnpsfvrfQDERPKVAYnefsneipvislAGIDDVGGKRAEICKKIVEACEDWGIFQVVDHGVDAKLISDMTRLATEFFALPPEEKLKFDMSGGKKGGFIVSSHLQGEVVKDWREIVTYfsfpkqsrdysrwpdkpegWMEVTKEYSDKLMGVACKLLEVLSEAMGLEKEALTKACVDMDQKIVVNYYPKCPQPDLTLGLKRHTDPGTITLLLQDQVGGLQATKDNGKTWITVQPIEGAFVVNLGDHGHYLSNGRFKNADHQAVVNSNSSRLSIAtfqnpapeatvyplkiregekpvleepipfsemyrRKMSKDLELARLKKlanerhqdsekaklgtkpieeila
MAPSTLTALAGEKTLNPSFVRFQDERPKVAYNEFSNEIPVISLAGIDDVGGKRAEICKKIVEACEDWGIFQVVDHGVDAKLISDMTRLATEFFALPPEEKLKFDMSGGKKGGFIVSSHLQGEVVKDWREIVTYFSFPKQSRDYSRWPDKPEGWMEVTKEYSDKLMGVACKLLEVLSEAMGLEKEALTKACVDMDQKIVVNYYPKCPQPDLTLGLKRHTDPGTITLLLQDQVGGLQATKDNGKTWITVQPIEGAFVVNLGDHGHYLSNGRFKNADHQAVVNSNSSRLSIATFQNPAPEATVYPLKIREGEKPVLEEPIPFSEMYRRKMSKDLELARLKKLANERHQDSEKAKLGTKPIEEILA
******************FVRFQDERPKVAYNEFSNEIPVISLAGIDDVGGKRAEICKKIVEACEDWGIFQVVDHGVDAKLISDMTRLATEFFALPPEEKLKFDMSGGKKGGFIVSSHLQGEVVKDWREIVTYFSFPKQSRDYSRWPDKPEGWMEVTKEYSDKLMGVACKLLEVLSEAMGLEKEALTKACVDMDQKIVVNYYPKCPQPDLTLGLKRHTDPGTITLLLQDQVGGLQATKDNGKTWITVQPIEGAFVVNLGDHGHYLSNGRFKNADH************************VYP************************************************************
*APSTL******KTLNPSFVRFQD**********SNEIPVISLAGIDDVGGKRAEICKKIVEACEDWGIFQVVDHGVDAKLISDMTRLATEFFALPPEEKLKF*MS*GKKGGFIVSSHLQGEVVKDWREIVTYFSFPKQSRDYSRWPDKPEGWMEVTKEYSDKLMGVACKLLEVLSEAMGLEKEALTKACVDMDQKIVVNYYPKCPQPDLTLGLKRHTDPGTITLLLQDQVGGLQATKDNGKTWITVQPIEGAFVVNLGDHGHYLSNGRFKNADHQAVVNSNSSRLSIATFQNPAPEATVYPLKIREGEKPVLEEPIPFSEMYRRKMSKDLELARL**********************EILA
MAPSTLTALAGEKTLNPSFVRFQDERPKVAYNEFSNEIPVISLAGIDDVGGKRAEICKKIVEACEDWGIFQVVDHGVDAKLISDMTRLATEFFALPPEEKLKFDMSGGKKGGFIVSSHLQGEVVKDWREIVTYFSFPKQSRDYSRWPDKPEGWMEVTKEYSDKLMGVACKLLEVLSEAMGLEKEALTKACVDMDQKIVVNYYPKCPQPDLTLGLKRHTDPGTITLLLQDQVGGLQATKDNGKTWITVQPIEGAFVVNLGDHGHYLSNGRFKNADHQAVVNSNSSRLSIATFQNPAPEATVYPLKIREGEKPVLEEPIPFSEMYRRKMSKDLELARLKKLAN***********GTKPIEEILA
*****LT****EKTLNPSFVRFQDERPKVAYNEFSNEIPVISLAGIDDVGGKRAEICKKIVEACEDWGIFQVVDHGVDAKLISDMTRLATEFFALPPEEKLKFDMSGGKKGGFIVSSHLQGEVVKDWREIVTYFSFPKQSRDYSRWPDKPEGWMEVTKEYSDKLMGVACKLLEVLSEAMGLEKEALTKACVDMDQKIVVNYYPKCPQPDLTLGLKRHTDPGTITLLLQDQVGGLQATKDNGKTWITVQPIEGAFVVNLGDHGHYLSNGRFKNADHQAVVNSNSSRLSIATFQNPAPEATVYPLKIREGEKPVLEEPIPFSEMYRRKMSKDLELARLKKLANERHQDSEKAKLGTKPIE*ILA
oooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooo
oooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooo
ooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooohhhhhhhhhhhhhhhhhhhhiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiii
iiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiihhhhhhhhhhhhhhhhooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooo
oooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooo
xxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxx
xxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxx
MAPSTLTALAGEKTLNPSFVRFQDERPKVAYNEFSNEIPVISLAGIDDVGGKRAEICKKIVEACEDWGIFQVVDHGVDAKLISDMTRLATEFFALPPEEKLKFDMSGGKKGGFIVSSHLQGEVVKDWREIVTYFSFPKQSRDYSRWPDKPEGWMEVTKEYSDKLMGVACKLLEVLSEAMGLEKEALTKACVDMDQKIVVNYYPKCPQPDLTLGLKRHTDPGTITLLLQDQVGGLQATKDNGKTWITVQPIEGAFVVNLGDHGHYLSNGRFKNADHQAVVNSNSSRLSIATFQNPAPEATVYPLKIREGEKPVLEEPIPFSEMYRRKMSKDLELARLKKLANERHQDSEKAKLGTKPIEEILA
no confident homologs detected

Close Homologs for Annotation Transfer

Close Homologs in SWISS-PROT Database Detected by BLAST ?

Original result of BLAST against SWISS-PROT Database

ID ?Alignment graph ?Length ? Definition ? RBH(Q2H) ? RBH(H2Q) ? Q cover ? H cover ? Identity ? E-value ?
Query362 2.2.26 [Sep-21-2011]
Q07353369 Naringenin,2-oxoglutarate N/A no 1.0 0.981 0.833 0.0
Q05965357 Naringenin,2-oxoglutarate N/A no 0.986 1.0 0.828 0.0
Q9S818358 Naringenin,2-oxoglutarate yes no 0.988 1.0 0.817 1e-180
P41090364 Naringenin,2-oxoglutarate yes no 1.0 0.994 0.829 1e-180
Q06942364 Naringenin,2-oxoglutarate N/A no 1.0 0.994 0.818 1e-180
Q7XZQ7368 Flavanone 3-dioxygenase O N/A no 1.0 0.983 0.807 1e-178
Q05964365 Naringenin,2-oxoglutarate N/A no 0.988 0.980 0.792 1e-171
Q05963356 Naringenin,2-oxoglutarate N/A no 0.933 0.949 0.799 1e-164
Q7XZQ8365 Flavone synthase OS=Petro N/A no 0.980 0.972 0.730 1e-158
P28038377 Naringenin,2-oxoglutarate N/A no 0.966 0.928 0.703 1e-155
>sp|Q07353|FL3H_PETHY Naringenin,2-oxoglutarate 3-dioxygenase (Fragment) OS=Petunia hybrida GN=AN3 PE=1 SV=1 Back     alignment and function desciption
 Score =  645 bits (1664), Expect = 0.0,   Method: Compositional matrix adjust.
 Identities = 305/366 (83%), Positives = 337/366 (92%), Gaps = 4/366 (1%)

Query: 1   MAPSTLTALAGEKTLNPSFVRFQDERPKVAYNEFSNEIPVISLAGIDDVGGKRAEICKKI 60
           + PSTLTALA EKTL  SF+R +DERPKVAYN+FSNEIP+ISL GIDD  GKRAEIC KI
Sbjct: 4   VTPSTLTALAEEKTLQTSFIRDEDERPKVAYNQFSNEIPIISLEGIDDETGKRAEICDKI 63

Query: 61  VEACEDWGIFQVVDHGVDAKLISDMTRLATEFFALPPEEKLKFDMSGGKKGGFIVSSHLQ 120
           V+ACEDWG+FQVVDHGVDA++IS MT  A EFFALPPEEKL+FDMSGGKKGGFIVSSHLQ
Sbjct: 64  VKACEDWGVFQVVDHGVDAEVISQMTTFAKEFFALPPEEKLRFDMSGGKKGGFIVSSHLQ 123

Query: 121 GEVVKDWREIVTYFSFPKQSRDYSRWPDKPEGWMEVTKEYSDKLMGVACKLLEVLSEAMG 180
           GEVV+DWREIVTYFS+P ++RDYSRWPDKPEGW+ VT++YS+KLM +ACKLL+VLSEAMG
Sbjct: 124 GEVVQDWREIVTYFSYPTRARDYSRWPDKPEGWIAVTQKYSEKLMELACKLLDVLSEAMG 183

Query: 181 LEKEALTKACVDMDQKIVVNYYPKCPQPDLTLGLKRHTDPGTITLLLQDQVGGLQATKDN 240
           LEKEALTKACVDMDQK+VVN+YPKCP+PDLTLGLKRHTDPGTITLLLQDQVGGLQATKDN
Sbjct: 184 LEKEALTKACVDMDQKVVVNFYPKCPEPDLTLGLKRHTDPGTITLLLQDQVGGLQATKDN 243

Query: 241 GKTWITVQPIEGAFVVNLGDHGHYLSNGRFKNADHQAVVNSNSSRLSIATFQNPAPEATV 300
           GKTWITVQP+EGAFVVNLGDHGH+LSNGRFKNADHQAVVNSNSSRLSIATFQNPAPEA V
Sbjct: 244 GKTWITVQPVEGAFVVNLGDHGHFLSNGRFKNADHQAVVNSNSSRLSIATFQNPAPEAIV 303

Query: 301 YPLKIREGEKPVLEEPIPFSEMYRRKMSKDLELARLKKLANERHQD----SEKAKLGTKP 356
           YPLKIREGEK +++EPI F+EMYRRKMSKDLELARLKK A E+       +EKAKL +KP
Sbjct: 304 YPLKIREGEKSIMDEPITFAEMYRRKMSKDLELARLKKQAKEQQLQAEVAAEKAKLESKP 363

Query: 357 IEEILA 362
           IEEILA
Sbjct: 364 IEEILA 369
Catalyzes the 3-beta-hydroxylation of 2S-flavanones to 2R,3R-dihydroflavonols which are intermediates in the biosynthesis of flavonols, anthocyanidins, catechins and proanthocyanidins in plants.
Petunia hybrida (taxid: 4102)
EC: 1EC: .EC: 1EC: 4EC: .EC: 1EC: 1EC: .EC: 9
>sp|Q05965|FL3H_MATIN Naringenin,2-oxoglutarate 3-dioxygenase (Fragment) OS=Matthiola incana GN=FHT PE=2 SV=1 Back     alignment and function description
>sp|Q9S818|FL3H_ARATH Naringenin,2-oxoglutarate 3-dioxygenase OS=Arabidopsis thaliana GN=F3H PE=1 SV=1 Back     alignment and function description
>sp|P41090|FL3H_VITVI Naringenin,2-oxoglutarate 3-dioxygenase OS=Vitis vinifera GN=F3H PE=2 SV=1 Back     alignment and function description
>sp|Q06942|FL3H_MALDO Naringenin,2-oxoglutarate 3-dioxygenase OS=Malus domestica PE=2 SV=1 Back     alignment and function description
>sp|Q7XZQ7|FL3H_PETCR Flavanone 3-dioxygenase OS=Petroselinum crispum GN=FHT PE=1 SV=1 Back     alignment and function description
>sp|Q05964|FL3H_DIACA Naringenin,2-oxoglutarate 3-dioxygenase OS=Dianthus caryophyllus GN=FHT PE=2 SV=1 Back     alignment and function description
>sp|Q05963|FL3H_CALCH Naringenin,2-oxoglutarate 3-dioxygenase OS=Callistephus chinensis GN=FHT PE=2 SV=1 Back     alignment and function description
>sp|Q7XZQ8|FNSI_PETCR Flavone synthase OS=Petroselinum crispum GN=FNSI PE=1 SV=1 Back     alignment and function description
>sp|P28038|FL3H_HORVU Naringenin,2-oxoglutarate 3-dioxygenase OS=Hordeum vulgare PE=2 SV=1 Back     alignment and function description

Close Homologs in the Non-Redundant Database Detected by BLAST ?

Original result of BLAST against Nonredundant Database

GI ?Alignment Graph ?Length ? Definition ? Q cover ? H cover ? Identity ? E-value ?
Query362
284518920362 flavanone 3-hydroxylase [Citrus maxima] 1.0 1.0 0.986 0.0
4126401362 flavanone 3-hydroxylase [Citrus sinensis 1.0 1.0 0.986 0.0
239633763362 flavanone 3-hydroxylase [Citrus maxima] 1.0 1.0 0.977 0.0
134039064365 flavanone-3-hydroxylase [Dimocarpus long 1.0 0.991 0.882 0.0
309951612363 flavanone 3-hydroxylase [Litchi chinensi 1.0 0.997 0.881 0.0
121755803368 flavanone-3-hydroxylase [Gossypium hirsu 1.0 0.983 0.866 0.0
119657097368 F3H [Gossypium barbadense] gi|289470638| 1.0 0.983 0.864 0.0
74273629368 gibberellin 20-oxidase 1 [Gossypium hirs 1.0 0.983 0.864 0.0
346540239364 F3H [Canarium album] 0.994 0.989 0.872 0.0
395760140363 flavanone 3-hydroxylase [Ampelopsis gros 1.0 0.997 0.865 0.0
>gi|284518920|gb|ADB92595.1| flavanone 3-hydroxylase [Citrus maxima] Back     alignment and taxonomy information
 Score =  743 bits (1919), Expect = 0.0,   Method: Compositional matrix adjust.
 Identities = 357/362 (98%), Positives = 360/362 (99%)

Query: 1   MAPSTLTALAGEKTLNPSFVRFQDERPKVAYNEFSNEIPVISLAGIDDVGGKRAEICKKI 60
           MAPSTLTALA EKTLNPSFVRFQDERPKVAYNEFSNEIPVISLAGIDDVGGKRAEICKKI
Sbjct: 1   MAPSTLTALAAEKTLNPSFVRFQDERPKVAYNEFSNEIPVISLAGIDDVGGKRAEICKKI 60

Query: 61  VEACEDWGIFQVVDHGVDAKLISDMTRLATEFFALPPEEKLKFDMSGGKKGGFIVSSHLQ 120
           VEACEDWGIFQVVDHGVDAKLISDMTRLATEFFALPPEEKLKFDMSGGKKGGFIVSSHLQ
Sbjct: 61  VEACEDWGIFQVVDHGVDAKLISDMTRLATEFFALPPEEKLKFDMSGGKKGGFIVSSHLQ 120

Query: 121 GEVVKDWREIVTYFSFPKQSRDYSRWPDKPEGWMEVTKEYSDKLMGVACKLLEVLSEAMG 180
           GEVVKDWREIVTYFS+PKQSRDYSRWPDKPEGWMEVTKEYSD+LMGVACKLLEVLSEAMG
Sbjct: 121 GEVVKDWREIVTYFSYPKQSRDYSRWPDKPEGWMEVTKEYSDQLMGVACKLLEVLSEAMG 180

Query: 181 LEKEALTKACVDMDQKIVVNYYPKCPQPDLTLGLKRHTDPGTITLLLQDQVGGLQATKDN 240
           LEKEALTKACVDMDQKIVVNYYPKCPQPDLTLGLKRHTDPGTITLLLQDQVGGLQATKDN
Sbjct: 181 LEKEALTKACVDMDQKIVVNYYPKCPQPDLTLGLKRHTDPGTITLLLQDQVGGLQATKDN 240

Query: 241 GKTWITVQPIEGAFVVNLGDHGHYLSNGRFKNADHQAVVNSNSSRLSIATFQNPAPEATV 300
           GKTWITVQPIEGAFVVNLGDHGHYLSNGRFKNADHQAVVNSNSSRLSIATFQNPAPEATV
Sbjct: 241 GKTWITVQPIEGAFVVNLGDHGHYLSNGRFKNADHQAVVNSNSSRLSIATFQNPAPEATV 300

Query: 301 YPLKIREGEKPVLEEPIPFSEMYRRKMSKDLELARLKKLANERHQDSEKAKLGTKPIEEI 360
           YPLKIREGEKPVLEEPIPFSEMYRRKMSKDLELARLKKLANE+HQDSEKAKL TKPIEEI
Sbjct: 301 YPLKIREGEKPVLEEPIPFSEMYRRKMSKDLELARLKKLANEKHQDSEKAKLDTKPIEEI 360

Query: 361 LA 362
           LA
Sbjct: 361 LA 362

Source: Citrus maxima

Species: Citrus maxima

Genus: Citrus

Family: Rutaceae

Order: Sapindales

Class:

Phylum: Streptophyta

Superkingdom: Eukaryota
>gi|4126401|dbj|BAA36553.1| flavanone 3-hydroxylase [Citrus sinensis] Back     alignment and taxonomy information
>gi|239633763|gb|ACR77526.1| flavanone 3-hydroxylase [Citrus maxima] Back     alignment and taxonomy information
>gi|134039064|gb|ABO48521.1| flavanone-3-hydroxylase [Dimocarpus longan] Back     alignment and taxonomy information
>gi|309951612|gb|ADO95201.1| flavanone 3-hydroxylase [Litchi chinensis] Back     alignment and taxonomy information
>gi|121755803|gb|ABM64799.1| flavanone-3-hydroxylase [Gossypium hirsutum] Back     alignment and taxonomy information
>gi|119657097|gb|ABL86673.1| F3H [Gossypium barbadense] gi|289470638|gb|ADC96713.1| flavanone-3-hydroxylase [Gossypium hirsutum] Back     alignment and taxonomy information
>gi|74273629|gb|ABA01482.1| gibberellin 20-oxidase 1 [Gossypium hirsutum] Back     alignment and taxonomy information
>gi|346540239|gb|AEO36935.1| F3H [Canarium album] Back     alignment and taxonomy information
>gi|395760140|gb|AFN70721.1| flavanone 3-hydroxylase [Ampelopsis grossedentata] Back     alignment and taxonomy information

Prediction of Gene Ontology (GO) Terms

Close Homologs with Gene Ontology terms Detected by BLAST ?

Original result of BLAST against Gene Ontology (AMIGO)

ID ? Alignment graph ? Length ? Definition ? Q cover ? H cover ? Identity ? E-value ?
Query362
TAIR|locus:2081008358 F3H "flavanone 3-hydroxylase" 0.988 1.0 0.817 3.9e-163
TAIR|locus:2153924341 DMR6 "DOWNY MILDEW RESISTANT 6 0.892 0.947 0.356 6.5e-51
TAIR|locus:2127686348 AT4G10490 [Arabidopsis thalian 0.837 0.870 0.373 1.7e-50
TAIR|locus:2127691349 AT4G10500 [Arabidopsis thalian 0.861 0.893 0.358 2.2e-50
TAIR|locus:2042942353 AT2G38240 [Arabidopsis thalian 0.848 0.869 0.364 4.1e-49
TAIR|locus:2169697371 AT5G05600 [Arabidopsis thalian 0.870 0.849 0.354 5.4e-47
TAIR|locus:2202980356 AT1G78550 [Arabidopsis thalian 0.848 0.862 0.341 1.4e-46
TAIR|locus:2085864352 AT3G19000 [Arabidopsis thalian 0.908 0.934 0.337 7.9e-46
TAIR|locus:2035671361 AT1G55290 [Arabidopsis thalian 0.812 0.814 0.340 7.9e-46
TAIR|locus:2089428364 LBO1 "LATERAL BRANCHING OXIDOR 0.779 0.774 0.354 2.7e-45
TAIR|locus:2081008 F3H "flavanone 3-hydroxylase" [Arabidopsis thaliana (taxid:3702)] Back     alignment and assigned GO terms
 Score = 1588 (564.1 bits), Expect = 3.9e-163, P = 3.9e-163
 Identities = 296/362 (81%), Positives = 329/362 (90%)

Query:     1 MAPSTLTALAGEKTLNPSFVRFQDERPKVAYNEFSNEIPVISLAGIDDVGGKRAEICKKI 60
             MAP TLT LAGE  LN  FVR +DERPKVAYN FS+EIPVISLAGIDDV GKR EIC++I
Sbjct:     1 MAPGTLTELAGESKLNSKFVRDEDERPKVAYNVFSDEIPVISLAGIDDVDGKRGEICRQI 60

Query:    61 VEACEDWGIFQVVDHGVDAKLISDMTRLATEFFALPPEEKLKFDMSGGKKGGFIVSSHLQ 120
             VEACE+WGIFQVVDHGVD  L++DMTRLA +FFALPPE+KL+FDMSGGKKGGFIVSSHLQ
Sbjct:    61 VEACENWGIFQVVDHGVDTNLVADMTRLARDFFALPPEDKLRFDMSGGKKGGFIVSSHLQ 120

Query:   121 GEVVKDWREIVTYFSFPKQSRDYSRWPDKPEGWMEVTKEYSDKLMGVACKLLEVLSEAMG 180
             GE V+DWREIVTYFS+P ++RDYSRWPDKPEGW++VT+EYS++LM +ACKLLEVLSEAMG
Sbjct:   121 GEAVQDWREIVTYFSYPVRNRDYSRWPDKPEGWVKVTEEYSERLMSLACKLLEVLSEAMG 180

Query:   181 LEKEALTKACVDMDQKIVVNYYPKCPQPDLTLGLKRHTDPGTITLLLQDQVGGLQATKDN 240
             LEKE+LT ACVDMDQKIVVNYYPKCPQPDLTLGLKRHTDPGTITLLLQDQVGGLQAT+DN
Sbjct:   181 LEKESLTNACVDMDQKIVVNYYPKCPQPDLTLGLKRHTDPGTITLLLQDQVGGLQATRDN 240

Query:   241 GKTWITVQPIEGAFVVNLGDHGHYLSNGRFKNADHQAVVNSNSSRLSIATFQNPAPEATV 300
             GKTWITVQP+EGAFVVNLGDHGH+LSNGRFKNADHQAVVNSNSSRLSIATFQNPAP+ATV
Sbjct:   241 GKTWITVQPVEGAFVVNLGDHGHFLSNGRFKNADHQAVVNSNSSRLSIATFQNPAPDATV 300

Query:   301 YPLKIREGEKPVLEEPIPFSEMYRRKMSKDLELARLKKLANERHQDSEKAKLGTKPIEEI 360
             YPLK+REGEK +LEEPI F+EMY+RKM +DLELARLKKLA E     E      KP+++I
Sbjct:   301 YPLKVREGEKAILEEPITFAEMYKRKMGRDLELARLKKLAKEERDHKEV----DKPVDQI 356

Query:   361 LA 362
              A
Sbjct:   357 FA 358
GO:0005737 "cytoplasm" evidence=ISM
GO:0016491 "oxidoreductase activity" evidence=IEA
GO:0016706 "oxidoreductase activity, acting on paired donors, with incorporation or reduction of molecular oxygen, 2-oxoglutarate as one donor, and incorporation of one atom each of oxygen into both donors" evidence=IEA
GO:0055114 "oxidation-reduction process" evidence=IEA
GO:0010224 "response to UV-B" evidence=RCA;IMP
GO:0009718 "anthocyanin-containing compound biosynthetic process" evidence=RCA
GO:0009744 "response to sucrose stimulus" evidence=RCA
GO:0009813 "flavonoid biosynthetic process" evidence=ISS;IMP;RCA
GO:0045486 "naringenin 3-dioxygenase activity" evidence=IMP
TAIR|locus:2153924 DMR6 "DOWNY MILDEW RESISTANT 6" [Arabidopsis thaliana (taxid:3702)] Back     alignment and assigned GO terms
TAIR|locus:2127686 AT4G10490 [Arabidopsis thaliana (taxid:3702)] Back     alignment and assigned GO terms
TAIR|locus:2127691 AT4G10500 [Arabidopsis thaliana (taxid:3702)] Back     alignment and assigned GO terms
TAIR|locus:2042942 AT2G38240 [Arabidopsis thaliana (taxid:3702)] Back     alignment and assigned GO terms
TAIR|locus:2169697 AT5G05600 [Arabidopsis thaliana (taxid:3702)] Back     alignment and assigned GO terms
TAIR|locus:2202980 AT1G78550 [Arabidopsis thaliana (taxid:3702)] Back     alignment and assigned GO terms
TAIR|locus:2085864 AT3G19000 [Arabidopsis thaliana (taxid:3702)] Back     alignment and assigned GO terms
TAIR|locus:2035671 AT1G55290 [Arabidopsis thaliana (taxid:3702)] Back     alignment and assigned GO terms
TAIR|locus:2089428 LBO1 "LATERAL BRANCHING OXIDOREDUCTASE 1" [Arabidopsis thaliana (taxid:3702)] Back     alignment and assigned GO terms

Prediction of Enzyme Commission (EC) Number

EC Number Prediction by Annotation Transfer from SWISS-PROT Entries ?

Original result of BLAST against SWISS-PROT

ID ?Name ?Annotated EC number ?Identity ?Query coverage ?Hit coverage ?RBH(Q2H) ?RBH(H2Q) ?
Q7XZQ8FNSI_PETCR1, ., 1, 4, ., 1, 1, ., 2, 20.73030.98060.9726N/Ano
Q7XZQ7FL3H_PETCR1, ., 1, 4, ., 1, 1, ., 90.80701.00.9836N/Ano
Q06942FL3H_MALDO1, ., 1, 4, ., 1, 1, ., 90.81861.00.9945N/Ano
P28038FL3H_HORVU1, ., 1, 4, ., 1, 1, ., 90.70320.96680.9283N/Ano
Q9S818FL3H_ARATH1, ., 1, 4, ., 1, 1, ., 90.81760.98891.0yesno
Q07353FL3H_PETHY1, ., 1, 4, ., 1, 1, ., 90.83331.00.9810N/Ano
Q05965FL3H_MATIN1, ., 1, 4, ., 1, 1, ., 90.82820.98611.0N/Ano
Q05964FL3H_DIACA1, ., 1, 4, ., 1, 1, ., 90.79280.98890.9808N/Ano
Q05963FL3H_CALCH1, ., 1, 4, ., 1, 1, ., 90.79940.93370.9494N/Ano
P41090FL3H_VITVI1, ., 1, 4, ., 1, 1, ., 90.82961.00.9945yesno

EC Number Prediction by Ezypred Server ?

Original result from Ezypred Server

Fail to connect to Ezypred Server

EC Number Prediction by EFICAz Software ?

Prediction LevelEC numberConfidence of Prediction
3rd Layer1.14.110.998
4th Layer1.14.11.90.994
4th Layer1.14.11.4LOW CONFIDENCE prediction!

Prediction of Functionally Associated Proteins

Functionally Associated Proteins Detected by STRING ?

Original result from the STRING server

Fail to connect to STRING server

Conserved Domains and Related Protein Families

Conserved Domains Detected by RPS-BLAST ?

Original result of RPS-BLAST against CDD database part I

ID ?Alignment Graph ?Length ? Definition ? E-value ?
Query362
PLN02515358 PLN02515, PLN02515, naringenin,2-oxoglutarate 3-di 0.0
PLN02639337 PLN02639, PLN02639, oxidoreductase, 2OG-Fe(II) oxy 1e-77
PLN03178360 PLN03178, PLN03178, leucoanthocyanidin dioxygenase 5e-77
PLN02393362 PLN02393, PLN02393, leucoanthocyanidin dioxygenase 3e-71
PLN03176120 PLN03176, PLN03176, flavanone-3-hydroxylase; Provi 1e-68
PLN02912348 PLN02912, PLN02912, oxidoreductase, 2OG-Fe(II) oxy 8e-67
PLN02758361 PLN02758, PLN02758, oxidoreductase, 2OG-Fe(II) oxy 3e-62
PLN02947374 PLN02947, PLN02947, oxidoreductase 1e-60
PLN02750345 PLN02750, PLN02750, oxidoreductase, 2OG-Fe(II) oxy 5e-59
PLN02704335 PLN02704, PLN02704, flavonol synthase 9e-59
PLN03001262 PLN03001, PLN03001, oxidoreductase, 2OG-Fe(II) oxy 1e-58
PLN02254358 PLN02254, PLN02254, gibberellin 3-beta-dioxygenase 2e-57
PLN02276361 PLN02276, PLN02276, gibberellin 20-oxidase 5e-56
PLN02216357 PLN02216, PLN02216, protein SRG1 9e-55
COG3491322 COG3491, PcbC, Isopenicillin N synthase and relate 8e-52
PLN02403303 PLN02403, PLN02403, aminocyclopropanecarboxylate o 1e-48
PLN02299321 PLN02299, PLN02299, 1-aminocyclopropane-1-carboxyl 5e-48
PLN02904357 PLN02904, PLN02904, oxidoreductase 7e-47
PLN02997325 PLN02997, PLN02997, flavonol synthase 1e-44
PTZ00273320 PTZ00273, PTZ00273, oxidase reductase; Provisional 2e-42
PLN00417348 PLN00417, PLN00417, oxidoreductase, 2OG-Fe(II) oxy 9e-42
pfam14226113 pfam14226, DIOX_N, non-haem dioxygenase in morphin 2e-32
pfam0317196 pfam03171, 2OG-FeII_Oxy, 2OG-Fe(II) oxygenase supe 4e-32
PLN02365300 PLN02365, PLN02365, 2-oxoglutarate-dependent dioxy 5e-30
PLN02156335 PLN02156, PLN02156, gibberellin 2-beta-dioxygenase 1e-28
PLN02485329 PLN02485, PLN02485, oxidoreductase 8e-28
PLN02984341 PLN02984, PLN02984, oxidoreductase, 2OG-Fe(II) oxy 2e-26
PLN03002332 PLN03002, PLN03002, oxidoreductase, 2OG-Fe(II) oxy 8e-21
>gnl|CDD|178130 PLN02515, PLN02515, naringenin,2-oxoglutarate 3-dioxygenase Back     alignment and domain information 
 Score =  695 bits (1794), Expect = 0.0
 Identities = 308/362 (85%), Positives = 335/362 (92%), Gaps = 4/362 (1%)

Query: 1   MAPSTLTALAGEKTLNPSFVRFQDERPKVAYNEFSNEIPVISLAGIDDVGGKRAEICKKI 60
           MAP TLTALAGE TL  SFVR +DERPKVAYN+FS+EIPVISLAGID+VGG+R EIC+KI
Sbjct: 1   MAPGTLTALAGESTLQSSFVRDEDERPKVAYNQFSDEIPVISLAGIDEVGGRRGEICRKI 60

Query: 61  VEACEDWGIFQVVDHGVDAKLISDMTRLATEFFALPPEEKLKFDMSGGKKGGFIVSSHLQ 120
           VEACEDWGIFQVVDHGVDA L++DMTRLA +FFALP EEKL+FDMSGGKKGGFIVSSHLQ
Sbjct: 61  VEACEDWGIFQVVDHGVDANLVADMTRLARDFFALPAEEKLRFDMSGGKKGGFIVSSHLQ 120

Query: 121 GEVVKDWREIVTYFSFPKQSRDYSRWPDKPEGWMEVTKEYSDKLMGVACKLLEVLSEAMG 180
           GE V+DWREIVTYFS+P ++RDYSRWPDKPEGW  VT+EYS+KLMG+ACKLLEVLSEAMG
Sbjct: 121 GEAVQDWREIVTYFSYPVRTRDYSRWPDKPEGWRAVTEEYSEKLMGLACKLLEVLSEAMG 180

Query: 181 LEKEALTKACVDMDQKIVVNYYPKCPQPDLTLGLKRHTDPGTITLLLQDQVGGLQATKDN 240
           LEKEALTKACVDMDQK+VVNYYPKCPQPDLTLGLKRHTDPGTITLLLQDQVGGLQAT+D 
Sbjct: 181 LEKEALTKACVDMDQKVVVNYYPKCPQPDLTLGLKRHTDPGTITLLLQDQVGGLQATRDG 240

Query: 241 GKTWITVQPIEGAFVVNLGDHGHYLSNGRFKNADHQAVVNSNSSRLSIATFQNPAPEATV 300
           GKTWITVQP+EGAFVVNLGDHGHYLSNGRFKNADHQAVVNSN SRLSIATFQNPAP+ATV
Sbjct: 241 GKTWITVQPVEGAFVVNLGDHGHYLSNGRFKNADHQAVVNSNCSRLSIATFQNPAPDATV 300

Query: 301 YPLKIREGEKPVLEEPIPFSEMYRRKMSKDLELARLKKLANERHQDSEKAKLGTKPIEEI 360
           YPLK+REGEKP+LEEPI F+EMYRRKMS+DLELARLKKLA E  Q  E      KPI++I
Sbjct: 301 YPLKVREGEKPILEEPITFAEMYRRKMSRDLELARLKKLAKEEDQQKEV----PKPIDQI 356

Query: 361 LA 362
           LA
Sbjct: 357 LA 358

Length = 358
>gnl|CDD|178245 PLN02639, PLN02639, oxidoreductase, 2OG-Fe(II) oxygenase family protein Back     alignment and domain information
>gnl|CDD|215614 PLN03178, PLN03178, leucoanthocyanidin dioxygenase; Provisional Back     alignment and domain information
>gnl|CDD|215220 PLN02393, PLN02393, leucoanthocyanidin dioxygenase like protein Back     alignment and domain information
>gnl|CDD|178720 PLN03176, PLN03176, flavanone-3-hydroxylase; Provisional Back     alignment and domain information
>gnl|CDD|178500 PLN02912, PLN02912, oxidoreductase, 2OG-Fe(II) oxygenase family protein Back     alignment and domain information
>gnl|CDD|215404 PLN02758, PLN02758, oxidoreductase, 2OG-Fe(II) oxygenase family protein Back     alignment and domain information
>gnl|CDD|215510 PLN02947, PLN02947, oxidoreductase Back     alignment and domain information
>gnl|CDD|178351 PLN02750, PLN02750, oxidoreductase, 2OG-Fe(II) oxygenase family protein Back     alignment and domain information
>gnl|CDD|166345 PLN02704, PLN02704, flavonol synthase Back     alignment and domain information
>gnl|CDD|166642 PLN03001, PLN03001, oxidoreductase, 2OG-Fe(II) oxygenase family protein Back     alignment and domain information
>gnl|CDD|215142 PLN02254, PLN02254, gibberellin 3-beta-dioxygenase Back     alignment and domain information
>gnl|CDD|215156 PLN02276, PLN02276, gibberellin 20-oxidase Back     alignment and domain information
>gnl|CDD|215129 PLN02216, PLN02216, protein SRG1 Back     alignment and domain information
>gnl|CDD|226022 COG3491, PcbC, Isopenicillin N synthase and related dioxygenases [General function prediction only] Back     alignment and domain information
>gnl|CDD|178025 PLN02403, PLN02403, aminocyclopropanecarboxylate oxidase Back     alignment and domain information
>gnl|CDD|215168 PLN02299, PLN02299, 1-aminocyclopropane-1-carboxylate oxidase Back     alignment and domain information
>gnl|CDD|178492 PLN02904, PLN02904, oxidoreductase Back     alignment and domain information
>gnl|CDD|178576 PLN02997, PLN02997, flavonol synthase Back     alignment and domain information
>gnl|CDD|140299 PTZ00273, PTZ00273, oxidase reductase; Provisional Back     alignment and domain information
>gnl|CDD|177810 PLN00417, PLN00417, oxidoreductase, 2OG-Fe(II) oxygenase family protein Back     alignment and domain information
>gnl|CDD|222608 pfam14226, DIOX_N, non-haem dioxygenase in morphine synthesis N-terminal Back     alignment and domain information
>gnl|CDD|217403 pfam03171, 2OG-FeII_Oxy, 2OG-Fe(II) oxygenase superfamily Back     alignment and domain information
>gnl|CDD|177993 PLN02365, PLN02365, 2-oxoglutarate-dependent dioxygenase Back     alignment and domain information
>gnl|CDD|177816 PLN02156, PLN02156, gibberellin 2-beta-dioxygenase Back     alignment and domain information
>gnl|CDD|215267 PLN02485, PLN02485, oxidoreductase Back     alignment and domain information
>gnl|CDD|215534 PLN02984, PLN02984, oxidoreductase, 2OG-Fe(II) oxygenase family protein Back     alignment and domain information
>gnl|CDD|178579 PLN03002, PLN03002, oxidoreductase, 2OG-Fe(II) oxygenase family protein Back     alignment and domain information

Conserved Domains Detected by HHsearch ?

Original result of HHsearch against CDD database

ID ?Alignment Graph ?Length ? Definition ? Probability ?
Query 362
PLN02515358 naringenin,2-oxoglutarate 3-dioxygenase 100.0
PLN02216357 protein SRG1 100.0
PLN02758361 oxidoreductase, 2OG-Fe(II) oxygenase family protei 100.0
PLN02254358 gibberellin 3-beta-dioxygenase 100.0
PLN02639337 oxidoreductase, 2OG-Fe(II) oxygenase family protei 100.0
PLN03178360 leucoanthocyanidin dioxygenase; Provisional 100.0
PLN02947374 oxidoreductase 100.0
PLN02904357 oxidoreductase 100.0
PLN02276361 gibberellin 20-oxidase 100.0
PLN02393362 leucoanthocyanidin dioxygenase like protein 100.0
PLN02750345 oxidoreductase, 2OG-Fe(II) oxygenase family protei 100.0
PLN02912348 oxidoreductase, 2OG-Fe(II) oxygenase family protei 100.0
PLN02704335 flavonol synthase 100.0
PLN00417348 oxidoreductase, 2OG-Fe(II) oxygenase family protei 100.0
PLN02997325 flavonol synthase 100.0
PTZ00273320 oxidase reductase; Provisional 100.0
PLN02485329 oxidoreductase 100.0
PLN02156335 gibberellin 2-beta-dioxygenase 100.0
COG3491322 PcbC Isopenicillin N synthase and related dioxygen 100.0
PLN03002332 oxidoreductase, 2OG-Fe(II) oxygenase family protei 100.0
PLN02299321 1-aminocyclopropane-1-carboxylate oxidase 100.0
KOG0143322 consensus Iron/ascorbate family oxidoreductases [S 100.0
PLN02365300 2-oxoglutarate-dependent dioxygenase 100.0
PLN02403303 aminocyclopropanecarboxylate oxidase 100.0
PLN02984341 oxidoreductase, 2OG-Fe(II) oxygenase family protei 100.0
PLN03001262 oxidoreductase, 2OG-Fe(II) oxygenase family protei 100.0
PLN03176120 flavanone-3-hydroxylase; Provisional 99.92
PF0317198 2OG-FeII_Oxy: 2OG-Fe(II) oxygenase superfamily Ent 99.91
PF14226116 DIOX_N: non-haem dioxygenase in morphine synthesis 99.89
PF13640100 2OG-FeII_Oxy_3: 2OG-Fe(II) oxygenase superfamily; 95.99
smart00702178 P4Hc Prolyl 4-hydroxylase alpha subunit homologues 95.49
PF12851171 Tet_JBP: Oxygenase domain of the 2OGFeDO superfami 94.07
PRK05467226 Fe(II)-dependent oxygenase superfamily protein; Pr 93.76
PF13532194 2OG-FeII_Oxy_2: 2OG-Fe(II) oxygenase superfamily; 88.99
PRK15401213 alpha-ketoglutarate-dependent dioxygenase AlkB; Pr 88.57
TIGR02466201 conserved hypothetical protein. This family consis 83.68
>PLN02515 naringenin,2-oxoglutarate 3-dioxygenase Back     alignment and domain information 
Probab=100.00  E-value=1.1e-85  Score=636.96  Aligned_cols=358  Identities=86%  Similarity=1.361  Sum_probs=315.5

Q ss_pred             CCCcccccccCCCCCCCccCCCCCCCCcccCCCCCCCCceeeCCCCCCCCchHHHHHHHHHHHHHhccEEEEecCCCCHH
Q 018041            1 MAPSTLTALAGEKTLNPSFVRFQDERPKVAYNEFSNEIPVISLAGIDDVGGKRAEICKKIVEACEDWGIFQVVDHGVDAK   80 (362)
Q Consensus         1 ~~~~~~~~~~~~~~~p~~~~~~~~~~~~~~~~~~~~~IPvIDls~l~~~~~~~~~~~~~l~~A~~~~GFF~l~nhGi~~~   80 (362)
                      |||.|+++.+++.++|++|+++..++|.......+.+||+|||+.+..++.+|.+++++|.+||++||||||+||||+.+
T Consensus         1 ~~~~~~~~~~~~~~~p~~~~~~~~~~~~~~~~~~~~~iPvIDls~~~~~~~~~~~~~~~l~~Ac~~~GFf~v~nHGI~~~   80 (358)
T PLN02515          1 MAPGTLTALAGESTLQSSFVRDEDERPKVAYNQFSDEIPVISLAGIDEVGGRRGEICRKIVEACEDWGIFQVVDHGVDAN   80 (358)
T ss_pred             CCccccccccCCCcCCHHhcCCchhccCccccccCCCCCEEEChhccCCchHHHHHHHHHHHHHHHCcEEEEEcCCCCHH
Confidence            89999999999999999999999888754333334579999999986544567889999999999999999999999999


Q ss_pred             HHHHHHHHHHHhhCCCHHhhccccccCCCccceeeccccCCccccchhhhhhcccCCCCCCCCCCCCCCCcchHHHHHHH
Q 018041           81 LISDMTRLATEFFALPPEEKLKFDMSGGKKGGFIVSSHLQGEVVKDWREIVTYFSFPKQSRDYSRWPDKPEGWMEVTKEY  160 (362)
Q Consensus        81 ~i~~~~~~~~~fF~lP~eeK~~~~~~~~~~~Gy~~~~~~~~~~~~d~~E~~~~~~~p~~~~~~~~wP~~~~~fr~~~~~y  160 (362)
                      +++++++.+++||+||.|+|+++........||.......+....||+|.+.+...|......|.||+.+++||+.+++|
T Consensus        81 li~~~~~~~~~FF~LP~eeK~k~~~~~~~~~Gy~~~~~~~~~~~~d~kE~~~~~~~~~~~~~~n~WP~~~~~fr~~~~~y  160 (358)
T PLN02515         81 LVADMTRLARDFFALPAEEKLRFDMSGGKKGGFIVSSHLQGEAVQDWREIVTYFSYPVRTRDYSRWPDKPEGWRAVTEEY  160 (358)
T ss_pred             HHHHHHHHHHHHhcCCHHHHhhhCcCCCCccCcccccccccccccCceeeeccccCcccccccccccccchHHHHHHHHH
Confidence            99999999999999999999998765544568854333333456799999876555555556799999889999999999


Q ss_pred             HHHHHHHHHHHHHHHHHHcCCCHHHHHHhhcCCCceEEEEecCCCCCCCCCCCccccccCCceEEEEeCCCCceEEEeCC
Q 018041          161 SDKLMGVACKLLEVLSEAMGLEKEALTKACVDMDQKIVVNYYPKCPQPDLTLGLKRHTDPGTITLLLQDQVGGLQATKDN  240 (362)
Q Consensus       161 ~~~~~~l~~~ll~~la~~Lgl~~~~~~~~~~~~~~~lrl~~YP~~~~~~~~~g~~~HtD~g~lTlL~qd~~~GLqV~~~~  240 (362)
                      +++|.+|+..||++|+++||+++++|.+.+....+.+|++|||+|+.++..+|+++|||+|+||||+||+++||||+.++
T Consensus       161 ~~~~~~L~~~ll~~la~~Lgl~~~~f~~~~~~~~~~lrl~~YP~~~~~~~~~G~~~HTD~g~lTlL~Qd~v~GLQV~~~~  240 (358)
T PLN02515        161 SEKLMGLACKLLEVLSEAMGLEKEALTKACVDMDQKVVVNYYPKCPQPDLTLGLKRHTDPGTITLLLQDQVGGLQATRDG  240 (358)
T ss_pred             HHHHHHHHHHHHHHHHHhcCCChhhHHHhhcCccceEEEeecCCCCChhhccCCCCCCCCCeEEEEecCCCCceEEEECC
Confidence            99999999999999999999999999988877778899999999998888899999999999999999999999999876


Q ss_pred             CCCeEEecCCCCcEEeeccchhhhhcCCcccccCccccCCCCCCcccceeeeCCCCCCeEeccccCCCCCCCCCCCcCHH
Q 018041          241 GKTWITVQPIEGAFVVNLGDHGHYLSNGRFKNADHQAVVNSNSSRLSIATFQNPAPEATVYPLKIREGEKPVLEEPIPFS  320 (362)
Q Consensus       241 g~~W~~V~p~pg~lvVnvGD~L~~~TnG~~kSt~HRVv~~~~~~R~Si~~F~~P~~d~~i~Pl~~~~~~~~~~y~~~t~~  320 (362)
                      +++|++|+|.||++||||||+||+||||+||||+|||+.++..+||||+||++|+.|++|.|++...+++|++|++++|+
T Consensus       241 ~~~Wi~Vpp~pgalVVNiGD~L~~~TNG~~kSt~HRVv~~~~~~R~Si~~F~~P~~d~~i~Pl~~~~~~~p~~y~~~t~~  320 (358)
T PLN02515        241 GKTWITVQPVEGAFVVNLGDHGHYLSNGRFKNADHQAVVNSNCSRLSIATFQNPAPDATVYPLKVREGEKPILEEPITFA  320 (358)
T ss_pred             CCeEEECCCCCCeEEEEccHHHHHHhCCeeeeecceEECCCCCCEEEEEEEecCCCCCEEECCCcCCCCCCCcCCCcCHH
Confidence            55799999999999999999999999999999999999888889999999999999999999986666678999999999


Q ss_pred             HHHHHHHHhhhhHHHhhHHHHhhhhhhhhhhcCCCchhhhcC
Q 018041          321 EMYRRKMSKDLELARLKKLANERHQDSEKAKLGTKPIEEILA  362 (362)
Q Consensus       321 e~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  362 (362)
                      ||++.++.+.+......+...++-|.+    --++||.+|||
T Consensus       321 eyl~~~~~~~~~~~~~~~~~~~~~~~~----~~~~~~~~~~~  358 (358)
T PLN02515        321 EMYRRKMSRDLELARLKKLAKEEDQQK----EVPKPIDQILA  358 (358)
T ss_pred             HHHHHHHhcccchHHHHHHHhhhhhhh----ccCCccccccC
Confidence            999999999998777777776655554    56789999986

>PLN02216 protein SRG1 Back     alignment and domain information
>PLN02758 oxidoreductase, 2OG-Fe(II) oxygenase family protein Back     alignment and domain information
>PLN02254 gibberellin 3-beta-dioxygenase Back     alignment and domain information
>PLN02639 oxidoreductase, 2OG-Fe(II) oxygenase family protein Back     alignment and domain information
>PLN03178 leucoanthocyanidin dioxygenase; Provisional Back     alignment and domain information
>PLN02947 oxidoreductase Back     alignment and domain information
>PLN02904 oxidoreductase Back     alignment and domain information
>PLN02276 gibberellin 20-oxidase Back     alignment and domain information
>PLN02393 leucoanthocyanidin dioxygenase like protein Back     alignment and domain information
>PLN02750 oxidoreductase, 2OG-Fe(II) oxygenase family protein Back     alignment and domain information
>PLN02912 oxidoreductase, 2OG-Fe(II) oxygenase family protein Back     alignment and domain information
>PLN02704 flavonol synthase Back     alignment and domain information
>PLN00417 oxidoreductase, 2OG-Fe(II) oxygenase family protein Back     alignment and domain information
>PLN02997 flavonol synthase Back     alignment and domain information
>PTZ00273 oxidase reductase; Provisional Back     alignment and domain information
>PLN02485 oxidoreductase Back     alignment and domain information
>PLN02156 gibberellin 2-beta-dioxygenase Back     alignment and domain information
>COG3491 PcbC Isopenicillin N synthase and related dioxygenases [General function prediction only] Back     alignment and domain information
>PLN03002 oxidoreductase, 2OG-Fe(II) oxygenase family protein Back     alignment and domain information
>PLN02299 1-aminocyclopropane-1-carboxylate oxidase Back     alignment and domain information
>KOG0143 consensus Iron/ascorbate family oxidoreductases [Secondary metabolites biosynthesis, transport and catabolism; General function prediction only] Back     alignment and domain information
>PLN02365 2-oxoglutarate-dependent dioxygenase Back     alignment and domain information
>PLN02403 aminocyclopropanecarboxylate oxidase Back     alignment and domain information
>PLN02984 oxidoreductase, 2OG-Fe(II) oxygenase family protein Back     alignment and domain information
>PLN03001 oxidoreductase, 2OG-Fe(II) oxygenase family protein Back     alignment and domain information
>PLN03176 flavanone-3-hydroxylase; Provisional Back     alignment and domain information
>PF03171 2OG-FeII_Oxy: 2OG-Fe(II) oxygenase superfamily Entry for Lysyl hydrolases This Prosite entry is a sub-family of the Pfam entry; InterPro: IPR005123 This domain is found in members of the 2-oxoglutarate (2OG) and Fe(II)-dependent oxygenase superfamily [], as well as the C-terminal of prolyl 4-hydroxylase alpha subunit Back     alignment and domain information
>PF14226 DIOX_N: non-haem dioxygenase in morphine synthesis N-terminal; PDB: 3OOX_A 1BK0_A 1IPS_B 1QIQ_A 1OC1_A 2Y86_A 2Y60_A 1W03_A 2VE1_A 1QJF_A Back     alignment and domain information
>PF13640 2OG-FeII_Oxy_3: 2OG-Fe(II) oxygenase superfamily; PDB: 3DKQ_B 3GZE_D 3HQR_A 2Y34_A 2G1M_A 2G19_A 3OUI_A 3OUJ_A 2HBU_A 2Y33_A Back     alignment and domain information
>smart00702 P4Hc Prolyl 4-hydroxylase alpha subunit homologues Back     alignment and domain information
>PF12851 Tet_JBP: Oxygenase domain of the 2OGFeDO superfamily ; InterPro: IPR024779 TETs are 2OG- and Fe(II)-dependent oxygenases that catalyse the conversion of 5 methyl-Cytosine (5-MC) to 5-hydroxymethyl-cytosine (hmC) in cultured cells and in vitro [] Back     alignment and domain information
>PRK05467 Fe(II)-dependent oxygenase superfamily protein; Provisional Back     alignment and domain information
>PF13532 2OG-FeII_Oxy_2: 2OG-Fe(II) oxygenase superfamily; PDB: 2IUW_A 3BTZ_A 3RZL_A 3RZH_A 3S5A_A 3RZG_A 3RZJ_A 3BUC_A 3H8X_A 3H8R_A Back     alignment and domain information
>PRK15401 alpha-ketoglutarate-dependent dioxygenase AlkB; Provisional Back     alignment and domain information
>TIGR02466 conserved hypothetical protein Back     alignment and domain information

Homologous Structure Templates

Structure Templates Detected by BLAST ?

Original result of BLAST against Protein Data Bank

ID ?Alignment Graph ?Length ? Definition ? E-value ?
Query362
1gp5_A356 Anthocyanidin Synthase From Arabidopsis Thaliana Co 4e-42
2brt_A355 Anthocyanidin Synthase From Arabidopsis Thaliana Co 4e-42
1gp4_A356 Anthocyanidin Synthase From Arabidopsis Thaliana (S 2e-41
1w9y_A319 The Structure Of Acc Oxidase Length = 319 6e-37
3oox_A312 Crystal Structure Of A Putative 2og-Fe(Ii) Oxygenas 6e-14
2bjs_A325 Isopenicillin N Synthase C-Terminal Truncation Muta 4e-11
1ips_A331 Isopenicillin N Synthase From Aspergillus Nidulans 4e-11
3on7_A280 Crystal Structure Of A Putative Oxygenase (So_2589) 3e-09
>pdb|1GP5|A Chain A, Anthocyanidin Synthase From Arabidopsis Thaliana Complexed With Trans-Dihydroquercetin Length = 356 Back     alignment and structure 
Iteration: 1

 Score =  168 bits (426), Expect = 4e-42,   Method: Compositional matrix adjust.
 Identities = 92/272 (33%), Positives = 159/272 (58%), Gaps = 12/272 (4%)
Query: 37  EIPVISLAGIDDVGGKRAEIC-KKIVEACEDWGIFQVVDHGVDAKLISDMTRLATEFFAL 95
           ++P I L  I+    K  E C +++ +A  DWG+  +++HG+ A L+  + +   EFF+L
Sbjct: 46  QVPTIDLKNIESDDEKIRENCIEELKKASLDWGVMHLINHGIPADLMERVKKAGEEFFSL 105
Query: 96  PPEEKLKF--DMSGGKKGGF--IVSSHLQGEVVKDWREIVTYFSFPKQSRDYSRWPDKPE 151
             EEK K+  D + GK  G+   ++++  G++  +W +   + ++P++ RD S WP  P 
Sbjct: 106 SVEEKEKYANDQATGKIQGYGSKLANNASGQL--EWEDYFFHLAYPEEKRDLSIWPKTPS 163
Query: 152 GWMEVTKEYSDKLMGVACKLLEVLSEAMGLEKEALTKACVDMDQKIV---VNYYPKCPQP 208
            ++E T EY+  L  +A K+ + LS  +GLE + L K    +++ ++   +NYYPKCPQP
Sbjct: 164 DYIEATSEYAKCLRLLATKVFKALSVGLGLEPDRLEKEVGGLEELLLQMKINYYPKCPQP 223
Query: 209 DLTLGLKRHTDPGTITLLLQDQVGGLQATKDNGKTWITVQPIEGAFVVNLGDHGHYLSNG 268
           +L LG++ HTD   +T +L + V GLQ   + GK W+T + +  + V+++GD    LSNG
Sbjct: 224 ELALGVEAHTDVSALTFILHNMVPGLQLFYE-GK-WVTAKCVPDSIVMHIGDTLEILSNG 281
Query: 269 RFKNADHQAVVNSNSSRLSIATFQNPAPEATV 300
           ++K+  H+ +VN    R+S A F  P  +  V
Sbjct: 282 KYKSILHRGLVNKEKVRISWAVFCEPPKDKIV 313
>pdb|2BRT|A Chain A, Anthocyanidin Synthase From Arabidopsis Thaliana Complexed With Naringenin Length = 355 Back     alignment and structure
>pdb|1GP4|A Chain A, Anthocyanidin Synthase From Arabidopsis Thaliana (Selenomethionine Substituted) Length = 356 Back     alignment and structure
>pdb|1W9Y|A Chain A, The Structure Of Acc Oxidase Length = 319 Back     alignment and structure
>pdb|3OOX|A Chain A, Crystal Structure Of A Putative 2og-Fe(Ii) Oxygenase Family Protein (Cc_0200) From Caulobacter Crescentus At 1.44 A Resolution Length = 312 Back     alignment and structure
>pdb|2BJS|A Chain A, Isopenicillin N Synthase C-Terminal Truncation Mutant Length = 325 Back     alignment and structure
>pdb|1IPS|A Chain A, Isopenicillin N Synthase From Aspergillus Nidulans (Manganese Complex) Length = 331 Back     alignment and structure
>pdb|3ON7|A Chain A, Crystal Structure Of A Putative Oxygenase (So_2589) From Shewanella Oneidensis At 2.20 A Resolution Length = 280 Back     alignment and structure

Structure Templates Detected by RPS-BLAST ?

Original result of RPS-BLAST against PDB70 database

ID ?Alignment Graph ?Length ? Definition ? E-value ?
Query362
1gp6_A356 Leucoanthocyanidin dioxygenase; 2-oxoglutarate dep 1e-145
1w9y_A319 1-aminocyclopropane-1-carboxylate oxidase 1; oxyge 1e-132
1odm_A331 Isopenicillin N synthase; antibiotic biosynthesis, 3e-80
3on7_A280 Oxidoreductase, iron/ascorbate family; structural 1e-75
1dcs_A311 Deacetoxycephalosporin C synthase; ferrous oxygena 4e-75
3oox_A312 Putative 2OG-Fe(II) oxygenase family protein; stru 4e-75
>1gp6_A Leucoanthocyanidin dioxygenase; 2-oxoglutarate dependent dioxygenase, flavonoid biosynthesis; HET: MES QUE DH2; 1.75A {Arabidopsis thaliana} SCOP: b.82.2.1 PDB: 1gp5_A* 1gp4_A* 2brt_A* Length = 356 Back     alignment and structure
 Score =  414 bits (1067), Expect = e-145
 Identities = 103/347 (29%), Positives = 175/347 (50%), Gaps = 18/347 (5%)

Query: 8   ALAGEKTLNPSFVRFQDERPKV------AYNEFSNEIPVISLAGID-DVGGKRAEICKKI 60
           A +G  ++   ++R ++E   +         E   ++P I L  I+ D    R    +++
Sbjct: 11  AKSGIISIPKEYIRPKEELESINDVFLEEKKEDGPQVPTIDLKNIESDDEKIRENCIEEL 70

Query: 61  VEACEDWGIFQVVDHGVDAKLISDMTRLATEFFALPPEEKLKF--DMSGGKKGGFIVSSH 118
            +A  DWG+  +++HG+ A L+  + +   EFF+L  EEK K+  D + GK  G+     
Sbjct: 71  KKASLDWGVMHLINHGIPADLMERVKKAGEEFFSLSVEEKEKYANDQATGKIQGYGSKLA 130

Query: 119 LQGEVVKDWREIVTYFSFPKQSRDYSRWPDKPEGWMEVTKEYSDKLMGVACKLLEVLSEA 178
                  +W +   + ++P++ RD S WP  P  ++E T EY+  L  +A K+ + LS  
Sbjct: 131 NNASGQLEWEDYFFHLAYPEEKRDLSIWPKTPSDYIEATSEYAKCLRLLATKVFKALSVG 190

Query: 179 MGLEKEALTKACVDMD---QKIVVNYYPKCPQPDLTLGLKRHTDPGTITLLLQDQVGGLQ 235
           +GLE + L K    ++    ++ +NYYPKCPQP+L LG++ HTD   +T +L + V GLQ
Sbjct: 191 LGLEPDRLEKEVGGLEELLLQMKINYYPKCPQPELALGVEAHTDVSALTFILHNMVPGLQ 250

Query: 236 ATKDNGKTWITVQPIEGAFVVNLGDHGHYLSNGRFKNADHQAVVNSNSSRLSIATFQNPA 295
              +    W+T + +  + V+++GD    LSNG++K+  H+ +VN    R+S A F  P 
Sbjct: 251 LFYEG--KWVTAKCVPDSIVMHIGDTLEILSNGKYKSILHRGLVNKEKVRISWAVFCEPP 308

Query: 296 PEATVY-PLK-IREGEKPVLEEPIPFSEMYRRKMSK--DLELARLKK 338
            +  V  PL  +   E P    P  F++    K+      EL   K 
Sbjct: 309 KDKIVLKPLPEMVSVESPAKFPPRTFAQHIEHKLFGKEQEELVSEKN 355
>1w9y_A 1-aminocyclopropane-1-carboxylate oxidase 1; oxygenase, 2OG oxygenase, ACCO, ACC oxidase; 2.1A {Petunia hybrida} SCOP: b.82.2.1 PDB: 1wa6_X Length = 319 Back     alignment and structure
>1odm_A Isopenicillin N synthase; antibiotic biosynthesis, B-lactam antibiotic, oxygenase, penicillin biosynthesis, oxidoreductase, iron; HET: ASV; 1.15A {Emericella nidulans} SCOP: b.82.2.1 PDB: 1blz_A* 1hb1_A* 1hb2_A* 1hb3_A* 1hb4_A* 1ips_A 1obn_A* 1oc1_A* 1bk0_A* 1odn_A* 1qiq_A* 1qje_A* 1qjf_A* 1uzw_A* 1w03_A* 1w04_A* 1w05_A* 1w06_A* 1w3v_A* 1w3x_A* ... Length = 331 Back     alignment and structure
>3on7_A Oxidoreductase, iron/ascorbate family; structural genomics, joint center for structural genomics, J protein structure initiative; 2.20A {Shewanella oneidensis} Length = 280 Back     alignment and structure
>1dcs_A Deacetoxycephalosporin C synthase; ferrous oxygenase, 2-oxoglutarate, oxidoreduc antibiotics, merohedral twinning; 1.30A {Streptomyces clavuligerus} SCOP: b.82.2.1 PDB: 1rxf_A 1rxg_A* 1unb_A* 1uo9_A 1uob_A* 1uof_A* 1uog_A* 2jb8_A 1w28_A 1w2a_X 1w2n_A* 1w2o_A* 1hjg_A 1hjf_A 1e5h_A 1e5i_A* Length = 311 Back     alignment and structure
>3oox_A Putative 2OG-Fe(II) oxygenase family protein; structural genomics, joint center for structural genomics; HET: MSE; 1.44A {Caulobacter crescentus CB15} Length = 312 Back     alignment and structure

Structure Templates Detected by HHsearch ?

Original result of HHsearch against PDB70 database

ID ?Alignment Graph ?Length ? Definition ? Probability ?
Query362
1gp6_A356 Leucoanthocyanidin dioxygenase; 2-oxoglutarate dep 100.0
3oox_A312 Putative 2OG-Fe(II) oxygenase family protein; stru 100.0
1w9y_A319 1-aminocyclopropane-1-carboxylate oxidase 1; oxyge 100.0
1odm_A331 Isopenicillin N synthase; antibiotic biosynthesis, 100.0
1dcs_A311 Deacetoxycephalosporin C synthase; ferrous oxygena 100.0
3on7_A280 Oxidoreductase, iron/ascorbate family; structural 100.0
3dkq_A243 PKHD-type hydroxylase SBAL_3634; putative oxygenas 94.99
2rg4_A216 Uncharacterized protein; rhodobacterales, oceanico 93.15
2hbt_A247 EGL nine homolog 1; prolyl hydroxylase, hypoxia in 90.47
2iuw_A238 Alkylated repair protein ALKB homolog 3; oxidoredu 83.82
3itq_A216 Prolyl 4-hydroxylase, alpha subunit domain protei; 81.85
>1gp6_A Leucoanthocyanidin dioxygenase; 2-oxoglutarate dependent dioxygenase, flavonoid biosynthesis; HET: MES QUE DH2; 1.75A {Arabidopsis thaliana} SCOP: b.82.2.1 PDB: 1gp5_A* 1gp4_A* 2brt_A* Back     alignment and structure
Probab=100.00  E-value=2.9e-78  Score=586.08  Aligned_cols=322  Identities=30%  Similarity=0.554  Sum_probs=280.3

Q ss_pred             CCCCCCCccCCCCCCCCcccC---CC---CCCCCceeeCCCCCCC-CchHHHHHHHHHHHHHhccEEEEecCCCCHHHHH
Q 018041           11 GEKTLNPSFVRFQDERPKVAY---NE---FSNEIPVISLAGIDDV-GGKRAEICKKIVEACEDWGIFQVVDHGVDAKLIS   83 (362)
Q Consensus        11 ~~~~~p~~~~~~~~~~~~~~~---~~---~~~~IPvIDls~l~~~-~~~~~~~~~~l~~A~~~~GFF~l~nhGi~~~~i~   83 (362)
                      ++.+||++|++|.+++|....   ..   .+.+||||||+.|.++ +.+|.+++++|.+||++||||||+||||+.++++
T Consensus        14 ~~~~vP~~~~~p~~~~~~~~~~~~~~~~~~~~~iPvIDls~l~~~~~~~~~~~~~~l~~A~~~~GFF~v~nHGi~~~l~~   93 (356)
T 1gp6_A           14 GIISIPKEYIRPKEELESINDVFLEEKKEDGPQVPTIDLKNIESDDEKIRENCIEELKKASLDWGVMHLINHGIPADLME   93 (356)
T ss_dssp             TCSSCCGGGSCCHHHHTTCCCHHHHHHCCCSCCCCEEECTTTTCSCHHHHHHHHHHHHHHHHHTSEEEEESCSCCHHHHH
T ss_pred             CCCCCCHHhcCCchhcccccccccccccccCCCCCEEEchhccCCChHHHHHHHHHHHHHHHhCCEEEEeCCCCCHHHHH
Confidence            578999999999877765321   01   1246999999998653 3457889999999999999999999999999999


Q ss_pred             HHHHHHHHhhCCCHHhhccccccCC--CccceeeccccCCccccchhhhhhcccCCCCCCCCCCCCCCCcchHHHHHHHH
Q 018041           84 DMTRLATEFFALPPEEKLKFDMSGG--KKGGFIVSSHLQGEVVKDWREIVTYFSFPKQSRDYSRWPDKPEGWMEVTKEYS  161 (362)
Q Consensus        84 ~~~~~~~~fF~lP~eeK~~~~~~~~--~~~Gy~~~~~~~~~~~~d~~E~~~~~~~p~~~~~~~~wP~~~~~fr~~~~~y~  161 (362)
                      ++++.+++||+||.|+|+++.....  ...||.........+..||+|.|.+...|......|.||..+++||+.+++|+
T Consensus        94 ~~~~~~~~FF~lP~eeK~~~~~~~~~~~~~Gy~~~~~~~~~~~~d~kE~~~~~~~p~~~~~~~~wP~~~~~fr~~~~~y~  173 (356)
T 1gp6_A           94 RVKKAGEEFFSLSVEEKEKYANDQATGKIQGYGSKLANNASGQLEWEDYFFHLAYPEEKRDLSIWPKTPSDYIEATSEYA  173 (356)
T ss_dssp             HHHHHHHHHHTSCHHHHGGGBCBGGGTBCSEEECCCCCSTTCCCCSCEEEEEEEESGGGCCGGGSCCSSTTHHHHHHHHH
T ss_pred             HHHHHHHHHHCCCHHHHHhhcccccccCccccCcCcccCCCCCCChhheeeeecCCccccccccCCCcchhhhHHHHHHH
Confidence            9999999999999999999976543  45688654333334578999998876555433456899999999999999999


Q ss_pred             HHHHHHHHHHHHHHHHHcCCCHHHHHHhhc---CCCceEEEEecCCCCCCCCCCCccccccCCceEEEEeCCCCceEEEe
Q 018041          162 DKLMGVACKLLEVLSEAMGLEKEALTKACV---DMDQKIVVNYYPKCPQPDLTLGLKRHTDPGTITLLLQDQVGGLQATK  238 (362)
Q Consensus       162 ~~~~~l~~~ll~~la~~Lgl~~~~~~~~~~---~~~~~lrl~~YP~~~~~~~~~g~~~HtD~g~lTlL~qd~~~GLqV~~  238 (362)
                      +.|.+|+..||++|+++||+++++|.+.+.   ...+.+|++|||+|+.++..+|+++|||+|+||||+||.++||||++
T Consensus       174 ~~~~~l~~~ll~~la~~Lgl~~~~f~~~~~~~~~~~~~lrl~~YPp~~~~~~~~g~~~HtD~g~lTlL~qd~v~GLQV~~  253 (356)
T 1gp6_A          174 KCLRLLATKVFKALSVGLGLEPDRLEKEVGGLEELLLQMKINYYPKCPQPELALGVEAHTDVSALTFILHNMVPGLQLFY  253 (356)
T ss_dssp             HHHHHHHHHHHHHHHHHTTSCTTHHHHHTTHHHHCEEEEEEEEECCCSSTTTCCSEEEECCCSSEEEEEECSCCCEEEEE
T ss_pred             HHHHHHHHHHHHHHHHHcCCCHHHHHHHhcccCCccceeeeeecCCCCCcccccCcCCccCCCeEEEEEEcCCCCeEEec
Confidence            999999999999999999999999999876   36778999999999998888999999999999999999999999997


Q ss_pred             CCCCCeEEecCCCCcEEeeccchhhhhcCCcccccCccccCCCCCCcccceeeeCCCCCC-eEeccc-cCCCCCCCCCCC
Q 018041          239 DNGKTWITVQPIEGAFVVNLGDHGHYLSNGRFKNADHQAVVNSNSSRLSIATFQNPAPEA-TVYPLK-IREGEKPVLEEP  316 (362)
Q Consensus       239 ~~g~~W~~V~p~pg~lvVnvGD~L~~~TnG~~kSt~HRVv~~~~~~R~Si~~F~~P~~d~-~i~Pl~-~~~~~~~~~y~~  316 (362)
                      ++  +|++|+|+||++||||||+||+||||+||||+|||+.+++.+||||+||++|+.|+ +|.|++ +++.++|++|++
T Consensus       254 ~g--~Wi~V~p~pgalvVNiGD~l~~~TnG~~kS~~HRVv~~~~~~R~Sia~F~~P~~d~~~i~pl~~~~~~~~p~~y~~  331 (356)
T 1gp6_A          254 EG--KWVTAKCVPDSIVMHIGDTLEILSNGKYKSILHRGLVNKEKVRISWAVFCEPPKDKIVLKPLPEMVSVESPAKFPP  331 (356)
T ss_dssp             TT--EEEECCCCTTCEEEEECHHHHHHTTTSSCCCCEEECCCSSCCEEEEEEEEECCTTTCEECCCGGGCCSSSCCSSCC
T ss_pred             CC--cEEECcCCCCeEEEEeccHHHHhcCCEeeccCceecCCCCCCEEEEEEeecCCCCCcEEeCChhhcCCCCCccCCC
Confidence            54  89999999999999999999999999999999999988888999999999999999 999998 556678999999


Q ss_pred             cCHHHHHHHHHHhhhhHH
Q 018041          317 IPFSEMYRRKMSKDLELA  334 (362)
Q Consensus       317 ~t~~e~~~~~~~~~~~~~  334 (362)
                      +|++||+..++.++++.+
T Consensus       332 ~t~~eyl~~~~~~~~d~~  349 (356)
T 1gp6_A          332 RTFAQHIEHKLFGKEQEE  349 (356)
T ss_dssp             EEHHHHHHHHHHHHHHHH
T ss_pred             ccHHHHHHHHHHhccCcc
Confidence            999999999988776443
>3oox_A Putative 2OG-Fe(II) oxygenase family protein; structural genomics, joint center for structural genomics; HET: MSE; 1.44A {Caulobacter crescentus CB15} Back     alignment and structure
>1w9y_A 1-aminocyclopropane-1-carboxylate oxidase 1; oxygenase, 2OG oxygenase, ACCO, ACC oxidase; 2.1A {Petunia hybrida} SCOP: b.82.2.1 PDB: 1wa6_X Back     alignment and structure
>1odm_A Isopenicillin N synthase; antibiotic biosynthesis, B-lactam antibiotic, oxygenase, penicillin biosynthesis, oxidoreductase, iron; HET: ASV; 1.15A {Emericella nidulans} SCOP: b.82.2.1 PDB: 1blz_A* 1hb1_A* 1hb2_A* 1hb3_A* 1hb4_A* 1ips_A 1obn_A* 1oc1_A* 1bk0_A* 1odn_A* 1qiq_A* 1qje_A* 1qjf_A* 1uzw_A* 1w03_A* 1w04_A* 1w05_A* 1w06_A* 1w3v_A* 1w3x_A* ... Back     alignment and structure
>1dcs_A Deacetoxycephalosporin C synthase; ferrous oxygenase, 2-oxoglutarate, oxidoreduc antibiotics, merohedral twinning; 1.30A {Streptomyces clavuligerus} SCOP: b.82.2.1 PDB: 1rxf_A 1rxg_A* 1unb_A* 1uo9_A 1uob_A* 1uof_A* 1uog_A* 2jb8_A 1w28_A 1w2a_X 1w2n_A* 1w2o_A* 1hjg_A 1hjf_A 1e5h_A 1e5i_A* Back     alignment and structure
>3on7_A Oxidoreductase, iron/ascorbate family; structural genomics, joint center for structural genomics, J protein structure initiative; 2.20A {Shewanella oneidensis} Back     alignment and structure
>3dkq_A PKHD-type hydroxylase SBAL_3634; putative oxygenase, structural genomics, JOI for structural genomics, JCSG; 2.26A {Shewanella baltica OS155} Back     alignment and structure
>2rg4_A Uncharacterized protein; rhodobacterales, oceanicola granulosus HTCC2516, Q2CBJ1_9RHO structural genomics, PSI-2; 1.90A {Oceanicola granulosus} PDB: 3bvc_A Back     alignment and structure
>2hbt_A EGL nine homolog 1; prolyl hydroxylase, hypoxia inducible factor, HIF, 2- oxoglutarate, oxygenase, oxidoreductase; HET: UN9; 1.60A {Homo sapiens} PDB: 2hbu_A* 2g1m_A* 3hqu_A* 3hqr_A* 2y33_A* 2y34_A* 2g19_A* 3ouj_A* 3ouh_A* 3oui_A* Back     alignment and structure
>2iuw_A Alkylated repair protein ALKB homolog 3; oxidoreductase, DNA/RNA repair, demethylase, beta jellyroll; HET: AKG; 1.50A {Homo sapiens} SCOP: b.82.2.10 Back     alignment and structure
>3itq_A Prolyl 4-hydroxylase, alpha subunit domain protei; double-stranded beta helix, alpha-keto dependent non-heme iron oxygenase; 1.40A {Bacillus anthracis str} Back     alignment and structure

Homologous Structure Domains

Structure Domains Detected by RPS-BLAST ?

Original result of RPS-BLAST against SCOP70(version1.75) database

ID ?Alignment Graph ?Length ? Definition ? E-value ?
Query 362
d1gp6a_349 b.82.2.1 (A:) Anthocyanidin synthase {Mouse-ear cr 4e-65
d1w9ya1307 b.82.2.1 (A:2-308) 1-aminocyclopropane-1-carboxyla 1e-62
d1dcsa_311 b.82.2.1 (A:) Deacetoxycephalosporin C synthase {S 4e-52
d1odma_329 b.82.2.1 (A:) Isopenicillin N synthase {Emericella 2e-48
>d1gp6a_ b.82.2.1 (A:) Anthocyanidin synthase {Mouse-ear cress (Arabidopsis thaliana) [TaxId: 3702]} Length = 349 Back     information, alignment and structure

class: All beta proteins
fold: Double-stranded beta-helix
superfamily: Clavaminate synthase-like
family: Penicillin synthase-like
domain: Anthocyanidin synthase
species: Mouse-ear cress (Arabidopsis thaliana) [TaxId: 3702]

 Score =  208 bits (529), Expect = 4e-65
 Identities = 100/340 (29%), Positives = 171/340 (50%), Gaps = 17/340 (5%)

Query: 8   ALAGEKTLNPSFVRFQDERPKV------AYNEFSNEIPVISLAGID-DVGGKRAEICKKI 60
           A +G  ++   ++R ++E   +         E   ++P I L  I+ D    R    +++
Sbjct: 10  AKSGIISIPKEYIRPKEELESINDVFLEEKKEDGPQVPTIDLKNIESDDEKIRENCIEEL 69

Query: 61  VEACEDWGIFQVVDHGVDAKLISDMTRLATEFFALPPEEKLKFDMSGGKKGGFIVSSHLQ 120
            +A  DWG+  +++HG+ A L+  + +   EFF+L  EEK K+             S L 
Sbjct: 70  KKASLDWGVMHLINHGIPADLMERVKKAGEEFFSLSVEEKEKYANDQATGKIQGYGSKLA 129

Query: 121 GEVVKD--WREIVTYFSFPKQSRDYSRWPDKPEGWMEVTKEYSDKLMGVACKLLEVLSEA 178
                   W +   + ++P++ RD S WP  P  ++E T EY+  L  +A K+ + LS  
Sbjct: 130 NNASGQLEWEDYFFHLAYPEEKRDLSIWPKTPSDYIEATSEYAKCLRLLATKVFKALSVG 189

Query: 179 MGLEKEALTKACVDMDQ---KIVVNYYPKCPQPDLTLGLKRHTDPGTITLLLQDQVGGLQ 235
           +GLE + L K    +++   ++ +NYYPKCPQP+L LG++ HTD   +T +L + V GLQ
Sbjct: 190 LGLEPDRLEKEVGGLEELLLQMKINYYPKCPQPELALGVEAHTDVSALTFILHNMVPGLQ 249

Query: 236 ATKDNGKTWITVQPIEGAFVVNLGDHGHYLSNGRFKNADHQAVVNSNSSRLSIATFQNPA 295
              +    W+T + +  + V+++GD    LSNG++K+  H+ +VN    R+S A F  P 
Sbjct: 250 LFYEG--KWVTAKCVPDSIVMHIGDTLEILSNGKYKSILHRGLVNKEKVRISWAVFCEPP 307

Query: 296 PEATVY-PLK-IREGEKPVLEEPIPFSEMYRRKM-SKDLE 332
            +  V  PL  +   E P    P  F++    K+  K+ E
Sbjct: 308 KDKIVLKPLPEMVSVESPAKFPPRTFAQHIEHKLFGKEQE 347
>d1w9ya1 b.82.2.1 (A:2-308) 1-aminocyclopropane-1-carboxylate oxidase 1 {Petunia hybrida [TaxId: 4102]} Length = 307 Back     information, alignment and structure
>d1dcsa_ b.82.2.1 (A:) Deacetoxycephalosporin C synthase {Streptomyces clavuligerus [TaxId: 1901]} Length = 311 Back     information, alignment and structure
>d1odma_ b.82.2.1 (A:) Isopenicillin N synthase {Emericella nidulans [TaxId: 162425]} Length = 329 Back     information, alignment and structure

Homologous Domains Detected by HHsearch ?

Original result of HHsearch against SCOP70(version1.75) database

ID ?Alignment Graph ?Length ? Definition ? Probability ?
Query362
d1gp6a_349 Anthocyanidin synthase {Mouse-ear cress (Arabidops 100.0
d1w9ya1307 1-aminocyclopropane-1-carboxylate oxidase 1 {Petun 100.0
d1odma_329 Isopenicillin N synthase {Emericella nidulans [Tax 100.0
d1dcsa_311 Deacetoxycephalosporin C synthase {Streptomyces cl 100.0
d2iuwa1210 AlkB homolog 3 {Human (Homo sapiens) [TaxId: 9606] 91.7
d2fdia1200 Alkylated DNA repair protein AlkB {Escherichia col 81.21
>d1gp6a_ b.82.2.1 (A:) Anthocyanidin synthase {Mouse-ear cress (Arabidopsis thaliana) [TaxId: 3702]} Back     information, alignment and structure
class: All beta proteins
fold: Double-stranded beta-helix
superfamily: Clavaminate synthase-like
family: Penicillin synthase-like
domain: Anthocyanidin synthase
species: Mouse-ear cress (Arabidopsis thaliana) [TaxId: 3702]

Probab=100.00  E-value=9.8e-75  Score=558.30  Aligned_cols=318  Identities=30%  Similarity=0.566  Sum_probs=270.6

Q ss_pred             ccCCCCCCCccCCCCCCCCccc------CCCCCCCCceeeCCCCCCC-CchHHHHHHHHHHHHHhccEEEEecCCCCHHH
Q 018041            9 LAGEKTLNPSFVRFQDERPKVA------YNEFSNEIPVISLAGIDDV-GGKRAEICKKIVEACEDWGIFQVVDHGVDAKL   81 (362)
Q Consensus         9 ~~~~~~~p~~~~~~~~~~~~~~------~~~~~~~IPvIDls~l~~~-~~~~~~~~~~l~~A~~~~GFF~l~nhGi~~~~   81 (362)
                      -||+.+||+.||+|+.++|...      ......+||||||+.|.++ +..|++++++|.+||+++|||||+||||+.++
T Consensus        11 ~~~~~~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~IPvIDls~l~~~d~~~r~~~~~~l~~A~~~~GFf~l~nHGI~~~l   90 (349)
T d1gp6a_          11 KSGIISIPKEYIRPKEELESINDVFLEEKKEDGPQVPTIDLKNIESDDEKIRENCIEELKKASLDWGVMHLINHGIPADL   90 (349)
T ss_dssp             HTTCSSCCGGGSCCHHHHTTCCCHHHHHHCCCSCCCCEEECTTTTCSCHHHHHHHHHHHHHHHHHTSEEEEESCSCCHHH
T ss_pred             hCCCccCCHhhcCChhhcCCCCccccccccCCCCCcCeEEChhcCCCCHHHHHHHHHHHHHHHHhCCEEEEEccCCCHHH
Confidence            3699999999999999888753      1234557999999999754 45678999999999999999999999999999


Q ss_pred             HHHHHHHHHHhhCCCHHhhccccccCC--CccceeeccccCCccccchhhhhhcccCCCCCCCCCCCCCCCcchHHHHHH
Q 018041           82 ISDMTRLATEFFALPPEEKLKFDMSGG--KKGGFIVSSHLQGEVVKDWREIVTYFSFPKQSRDYSRWPDKPEGWMEVTKE  159 (362)
Q Consensus        82 i~~~~~~~~~fF~lP~eeK~~~~~~~~--~~~Gy~~~~~~~~~~~~d~~E~~~~~~~p~~~~~~~~wP~~~~~fr~~~~~  159 (362)
                      +++++++++.||+||.|+|+++.....  ..+||............++.+.+.....+......|.||...+.|++.+++
T Consensus        91 i~~~~~~~~~FF~lP~eeK~k~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~n~wp~~~~~f~e~~~~  170 (349)
T d1gp6a_          91 MERVKKAGEEFFSLSVEEKEKYANDQATGKIQGYGSKLANNASGQLEWEDYFFHLAYPEEKRDLSIWPKTPSDYIEATSE  170 (349)
T ss_dssp             HHHHHHHHHHHHTSCHHHHGGGBCBGGGTBCSEEECCCCCSTTCCCCSCEEEEEEEESGGGCCGGGSCCSSTTHHHHHHH
T ss_pred             HHHHHHHHHHHHcCCHHHHhhhhcccccCCccccccccccccccccchhhhhcccccccccccccccccccchHHHHHHH
Confidence            999999999999999999999865422  223343222222233445555443333333345568999999999999999


Q ss_pred             HHHHHHHHHHHHHHHHHHHcCCCHHHHHHhhc---CCCceEEEEecCCCCCCCCCCCccccccCCceEEEEeCCCCceEE
Q 018041          160 YSDKLMGVACKLLEVLSEAMGLEKEALTKACV---DMDQKIVVNYYPKCPQPDLTLGLKRHTDPGTITLLLQDQVGGLQA  236 (362)
Q Consensus       160 y~~~~~~l~~~ll~~la~~Lgl~~~~~~~~~~---~~~~~lrl~~YP~~~~~~~~~g~~~HtD~g~lTlL~qd~~~GLqV  236 (362)
                      |++.|.+|+..|+++++++||+++++|.+.+.   ...+.+|++|||+++.+...+|+++|||+|+||||+|+.++||||
T Consensus       171 ~~~~~~~la~~ll~~la~~Lgl~~~~~~~~~~~~~~~~~~lrl~~Yp~~~~~~~~~g~~~HtD~g~lTlL~q~~~~GLqv  250 (349)
T d1gp6a_         171 YAKCLRLLATKVFKALSVGLGLEPDRLEKEVGGLEELLLQMKINYYPKCPQPELALGVEAHTDVSALTFILHNMVPGLQL  250 (349)
T ss_dssp             HHHHHHHHHHHHHHHHHHHTTSCTTHHHHHTTHHHHCEEEEEEEEECCCSSTTTCCSEEEECCCSSEEEEEECSCCCEEE
T ss_pred             HHHHHHHHHHhhhHHHHHHcCCCHHHHHHHhccccccceeeeecccccccchhhccccccCCCCcceEEEeccCCcceee
Confidence            99999999999999999999999999988764   245679999999999888889999999999999999999999999


Q ss_pred             EeCCCCCeEEecCCCCcEEeeccchhhhhcCCcccccCccccCCCCCCcccceeeeCCCCCCeE-eccc-cCCCCCCCCC
Q 018041          237 TKDNGKTWITVQPIEGAFVVNLGDHGHYLSNGRFKNADHQAVVNSNSSRLSIATFQNPAPEATV-YPLK-IREGEKPVLE  314 (362)
Q Consensus       237 ~~~~g~~W~~V~p~pg~lvVnvGD~L~~~TnG~~kSt~HRVv~~~~~~R~Si~~F~~P~~d~~i-~Pl~-~~~~~~~~~y  314 (362)
                      +.++  +|++|+|.+|++|||+||+||+||||+||||+|||+.+++.+||||+||++|+.|++| .|++ +++.++|++|
T Consensus       251 ~~~g--~W~~V~p~~~a~vVNvGD~l~~~TnG~~~St~HRVv~~~~~~R~Si~~F~~p~~d~~i~~pl~~~v~~~~p~~y  328 (349)
T d1gp6a_         251 FYEG--KWVTAKCVPDSIVMHIGDTLEILSNGKYKSILHRGLVNKEKVRISWAVFCEPPKDKIVLKPLPEMVSVESPAKF  328 (349)
T ss_dssp             EETT--EEEECCCCTTCEEEEECHHHHHHTTTSSCCCCEEECCCSSCCEEEEEEEEECCTTTCEECCCGGGCCSSSCCSS
T ss_pred             ecCC--ceEEccCCCCCeeeeHHhHHHHHhCCCccCcCccccCCCCCCeEEEEEEecCCCcceeecCCHHHcCCCCCCCC
Confidence            8764  8999999999999999999999999999999999999988999999999999999876 8998 6677889999


Q ss_pred             CCcCHHHHHHHHHH
Q 018041          315 EPIPFSEMYRRKMS  328 (362)
Q Consensus       315 ~~~t~~e~~~~~~~  328 (362)
                      +++|++||+++|+.
T Consensus       329 ~~~t~~e~~~~rl~  342 (349)
T d1gp6a_         329 PPRTFAQHIEHKLF  342 (349)
T ss_dssp             CCEEHHHHHHHHHH
T ss_pred             CCccHHHHHHHHHh
Confidence            99999999999883
>d1w9ya1 b.82.2.1 (A:2-308) 1-aminocyclopropane-1-carboxylate oxidase 1 {Petunia hybrida [TaxId: 4102]} Back     information, alignment and structure
>d1odma_ b.82.2.1 (A:) Isopenicillin N synthase {Emericella nidulans [TaxId: 162425]} Back     information, alignment and structure
>d1dcsa_ b.82.2.1 (A:) Deacetoxycephalosporin C synthase {Streptomyces clavuligerus [TaxId: 1901]} Back     information, alignment and structure
>d2iuwa1 b.82.2.10 (A:70-279) AlkB homolog 3 {Human (Homo sapiens) [TaxId: 9606]} Back     information, alignment and structure
>d2fdia1 b.82.2.10 (A:15-214) Alkylated DNA repair protein AlkB {Escherichia coli [TaxId: 562]} Back     information, alignment and structure