Citrus Sinensis ID: 018050

Local Sequence Feature Prediction

Prediction and (Method)	Result

Residue Number Marker

Protein Sequence

Secondary Structure (PSIPRED)

Secondary Structure Prediction (SSPRO)

Coil and Loop (DISEMBL)

Flexible Loop (DISEMBL)

Low Complexity Region (SEG)

Disordered region (IsUnstruct)

Disordered Region (DISOPRED)

Disordered Region (DISEMBL)

Disordered Region (DISPRO)

Transmembrane Helix (TMHMM)

Transmembrane Helix (HMMTOP)

Transmembrane Helix (MEMSAT)

TM Helix, Signal Peptide (MEMSAT_SVM)

TM Helix, Signal Peptide (Phobius)

Signal Peptide (SignalP HMM Mode)

Signal Peptide (SignalP NN Mode)

Coiled Coils (COILS)

Positional Conservation

--------10--------20--------30--------40--------50--------60--------70--------80--------90-------100-------110-------120-------130-------140-------150-------160-------170-------180-------190-------200-------210-------220-------230-------240-------250-------260-------270-------280-------290-------300-------310-------320-------330-------340-------350-------360-

MESELKDLNSKQLKSTASSDDGGSAKDDRPLLKPDAADNIQELEKKFAPYVRNDVYGTMGRGELPLAEKFLIGIAMVTLLPIRVVLAMTVLVIYYLICRVCTLFSAPNRGEDEQEDYAHMGGWRRSVVVVTGRFLSRVMLFVLGFYWITETFRILDVQEKSENEAKNQSKDEDEAKDQDEESGRPGAIISNHVSYLDILYHMSSSFPSFVAKRSVAKLPLVGLISKCLGCVYVQRESKSSDFKGVSGVVTERVREAHRDKSAPMMMLFPEGTTTNGDYLLPFKTGAFLARAPVLPVILRYPYQRFSPAWDSISGQEKDDPKLYAENVRRLMASERNLILSDIGLAEKRIYHAALNGLLSQS

cccHHcccccccccccccccccccccccccccccccccHHHHHHHccccccccccccccccccccHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHccccccccccccccccccHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHcccccccccccccccccccEEEEEccccHHHHHHHHHccccEEEEccccccccHHHHHHHHcccEEEEccccccHHHHHHHHHHHHHHHHHHcccccEEEEEEcccccccccccccccccccccccEEEEEEEccccccccccccccccccccHHHHHHHHHHHHHHHHHHHHccccHHHHHHHHHHHccccccc

cHHHHHcccccccccccccccccccccccccccccccHHHHHHHHccccccccccccccccccccHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHccccccccccccccccHHHHHHHHHHHHHHHHHHHHHHHHHEEEEEccccccHHHcccHHcccccccHEEEccccccccccEEEEEcccccccEEEEEcccccHHEEEcccccccHHHHHHHccccEEEEccccccHHHHHHHHHHHHHHHHHcccccccEEEEcccccccccEEEEEccccEcccccEEEEEEEccccccccccccccHHHcccHHHHHHHHHHHHHHHcccccccccHHHHHHHHHHHHcccccc

meselkdlnskqlkstassddggsakddrpllkpdaADNIQELEKKFapyvrndvygtmgrgelplAEKFLIGIAMVTLLPIRVVLAMTVLVIYYLICRVCtlfsapnrgedeqedyahmggwrRSVVVVTGRFLSRVMLFVLGFYWITETFRILDVQEKseneaknqskdedeakdqdeesgrpgaiisNHVSYLDILYhmsssfpsfvaKRSVAKLPLVGLISKCLgcvyvqreskssdfkgvsgVVTERVReahrdksapmmmlfpegtttngdyllpfktgaflarapvlpvilrypyqrfspawdsisgqekddpkLYAENVRRLMASERNLILSDIGLAEKRIYHAALNGLLSQS

meselkdlnskqlkstassddggsakddrpllkpdaadniqelekkfapyvrnDVYGTMGRGELPLAEKFLIGIAMVTLLPIRVVLAMTVLVIYYLICRVCTLFSAPNRGEDEqedyahmggwrRSVVVVTGRFLSRVMLFVLGFYWITETFRILDVqekseneaknqskdedeakdqdeesgrpgaIISNHVSYLDILYHMSSSFPSFVAKRSVAKLPLVGLISKCLGCVYvqreskssdfkgvsgvvtervreahrdksapmmMLFPEGTTTNGDYLLPFKTGAFLARAPVLPVILRYPYQRFspawdsisgqekddPKLYAENVRRLMASERNLILSDIGLAEKRIYHAALNGLLSQS

MESELKDLNSKQLkstassddggsakddRPLLKPDAADNIQELEKKFAPYVRNDVYGTMGRGELPLAEKFLIGIAMVTLLPIRVVLAMTVLVIYYLICRVCTLFSAPNRGEDEQEDYAHMGGWRRSVVVVTGRFLSRVMLFVLGFYWITETFRILDVQEKSENEAKNqskdedeakdqdeesGRPGAIISNHVSYLDILYHMSSSFPSFVAKRSVAKLPLVGLISKCLGCVYVQRESKSSDFKGVSGVVTERVREAHRDKSAPMMMLFPEGTTTNGDYLLPFKTGAFLARAPVLPVILRYPYQRFSPAWDSISGQEKDDPKLYAENVRRLMASERNLILSDIGLAEKRIYHAALNGLLSQS

*******************************************EKKFAPYVRNDVYGTMGRGELPLAEKFLIGIAMVTLLPIRVVLAMTVLVIYYLICRVCTLFSAP********DYAHMGGWRRSVVVVTGRFLSRVMLFVLGFYWITETFRILDV*****************************AIISNHVSYLDILYHMSSSFPSFVAKRSVAKLPLVGLISKCLGCVYVQR******************************MLFPEGTTTNGDYLLPFKTGAFLARAPVLPVILRYPYQRFSPAWDSI*********LYAENVRRLMASERNLILSDIGLAEKRIYHAALNGL****

************************************************PYVRNDVYGTMGRGELPLAEKFLIGIAMVTLLPIRVVLAMTVLVIYYLICRVCTLFSAPNRGEDEQEDYAHMGGWRRSVVVVTGRFLSRVMLFVLGFYWITETFRILDVQEKSENEAKNQSKDEDEAKDQDEESGRPGAIISNHVSYLDILYHMSSSFPSFVAKRSVAKLPLVGLISKCLGCVYVQRE****************VREAHRDKSAPMMMLFPEGTTTNGDYLLPFKTGAFLARAPVLPVILRYPYQRFSPAWDSISGQEKDDPKLYAENVRRLMASERNLILSDIGLAEKRIYHAALNG*****

***************************DRPLLKPDAADNIQELEKKFAPYVRNDVYGTMGRGELPLAEKFLIGIAMVTLLPIRVVLAMTVLVIYYLICRVCTLFSAPNRGEDEQEDYAHMGGWRRSVVVVTGRFLSRVMLFVLGFYWITETFRILDVQEK***********************RPGAIISNHVSYLDILYHMSSSFPSFVAKRSVAKLPLVGLISKCLGCVYVQRESKSSDFKGVSGVVTERVREAHRDKSAPMMMLFPEGTTTNGDYLLPFKTGAFLARAPVLPVILRYPYQRFSPAWDSISGQEKDDPKLYAENVRRLMASERNLILSDIGLAEKRIYHAALNGLLSQS

************************************ADNIQELEKKFAPYVRNDVYGTMGRGELPLAEKFLIGIAMVTLLPIRVVLAMTVLVIYYLICRVCTLFSAPNRGEDEQEDYAHMGGWRRSVVVVTGRFLSRVMLFVLGFYWITETFRILDVQEKSENEAKNQSKDEDEAKDQDEESGRPGAIISNHVSYLDILYHMSSSFPSFVAKRSVAKLPLVGLISKCLGCVYVQRESKSSDFKGVSGVVTERVREAHRDKSAPMMMLFPEGTTTNGDYLLPFKTGAFLARAPVLPVILRYPYQRFSPAWDSISGQEKDDPKLYAENVRRLMASERNLILSDIGLAEKRIYHAALNG*****

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MESELKDLNSKQLKSTASSDDGGSAKDDRPLLKPDAADNIQELEKKFAPYVRNDVYGTMGRGELPLAEKFLIGIAMVTLLPIRVVLAMTVLVIYYLICRVCTLFSAPNRGEDEQEDYAHMGGWRRSVVVVTGRFLSRVMLFVLGFYWITETFRILDVxxxxxxxxxxxxxxxxxxxxxDEESGRPGAIISNHVSYLDILYHMSSSFPSFVAKRSVAKLPLVGLISKCLGCVYVQRESKSSDFKGVSGVVTERVREAHRDKSAPMMMLFPEGTTTNGDYLLPFKTGAFLARAPVLPVILRYPYQRFSPAWDSISGQEKDDPKLYAENVRRLMASERNLILSDIGLAEKRIYHAALNGLLSQS

no confident homologs detected

Close Homologs for Annotation Transfer

Close Homologs in SWISS-PROT Database Detected by BLAST

Original result of BLAST against SWISS-PROT Database

ID	Alignment graph	Length	Definition	RBH(Q2H)	RBH(H2Q)	Q cover	H cover	Identity	E-value
Query		361	2.2.26 [Sep-21-2011]
Q1LWG4		517	Lysophosphatidylcholine a	no	no	0.686	0.479	0.270	4e-21
Q8BYI6		544	Lysophosphatidylcholine a	yes	no	0.681	0.452	0.262	1e-19
Q28C60		522	Lysophospholipid acyltran	no	no	0.609	0.421	0.274	2e-19
Q8NF37		534	Lysophosphatidylcholine a	yes	no	0.706	0.477	0.269	1e-18
Q6DCK1		522	Lysophospholipid acyltran	N/A	no	0.606	0.419	0.272	2e-18
Q0KHU5		533	1-acylglycerophosphocholi	yes	no	0.650	0.440	0.283	2e-18
Q7L5N7		544	Lysophosphatidylcholine a	no	no	0.692	0.459	0.249	8e-18
Q1HAQ0		534	Lysophosphatidylcholine a	yes	no	0.756	0.511	0.261	8e-18
Q3TFD2		534	Lysophosphatidylcholine a	no	no	0.761	0.514	0.254	2e-17
P0C1Q3		544	Lysophosphatidylcholine a	no	no	0.559	0.371	0.265	4e-17

>sp\|Q1LWG4\|PCAT1_DANRE Lysophosphatidylcholine acyltransferase 1 OS=Danio rerio GN=lpcat1 PE=2 SV=1	Back alignment and function desciption

 Score =  102 bits (255), Expect = 4e-21,   Method: Compositional matrix adjust.
 Identities = 85/314 (27%), Positives = 134/314 (42%), Gaps = 66/314 (21%)

Query: 68  EKFLIGIAMVTLLPIRVVLAMTVLVIYYLICRVCTLFSAPNRGEDEQEDYAHMGGWRRSV 127
           +K  I +  VTL P+R++ A  ++++ +    V T+     R E+  E  +    W R +
Sbjct: 37  QKLKIAVMTVTLFPVRLLFAAFMMLLAWPFAFVATV----GRSENAVEPLS----WWRWL 88

Query: 128 VVVTGRFLSRVMLFVLGFYWITETFRILDVQEKSENEAKNQSKDEDEAKDQDEESGRPGA 187
           V +  + + R M F  GF+W+                 K +     EA         P  
Sbjct: 89  VDLALKAIMRAMWFSGGFHWV---------------RVKGRPALPSEA---------PIL 124

Query: 188 IISNHVSYLDILYHMSSSFPSFVAKRSVAKLPLVGLISKCLGCVYVQRESKSSDFKGVSG 247
            ++ H SY D +  ++ +  S V K     +P+ G + K +  V+V R  + S  K    
Sbjct: 125 TMAPHSSYFDAI-PVTMTMASIVMKAESKDIPVWGTLIKFIRPVFVSRSDQDSRRK---- 179

Query: 248 VVTERVREAHRDKSAPMMMLFPEGTTTNGDYLLPFKTGAFLARAPVLPVILRYPYQRFSP 307
            V E  R A  +   P +M+FPEGT TN   L+ FK GAF+   PV PV+LRYP +  + 
Sbjct: 180 TVEEIKRRASSNGEWPQIMIFPEGTCTNRSCLIAFKPGAFIPGVPVQPVVLRYPNELDTI 239

Query: 308 AWD-----------------------------SISGQEKDDPKLYAENVRRLMASERNLI 338
           +W                              + S +EK DP L+A NVRR+MA    L 
Sbjct: 240 SWTWQGPGAFKILWLTLCQLHNFVEIEYLPTYTPSEEEKKDPALFASNVRRIMAKALGLP 299

Query: 339 LSDIGLAEKRIYHA 352
           + D    + ++  A
Sbjct: 300 IIDYSFEDCQLAMA 313

Possesses both acyltransferase and acetyltransferase activities. Activity is calcium-independent. Mediates the conversion of 1-acyl-sn-glycero-3-phosphocholine (LPC) into phosphatidylcholine (PC).
Danio rerio (taxid: 7955)
EC: 2EC: .EC: 3EC: .EC: 1EC: .EC: 6EC: 7

>sp\|Q8BYI6\|PCAT2_MOUSE Lysophosphatidylcholine acyltransferase 2 OS=Mus musculus GN=Lpcat2 PE=1 SV=1	Back alignment and function description

>sp\|Q28C60\|LPCT4_XENTR Lysophospholipid acyltransferase LPCAT4 OS=Xenopus tropicalis GN=lpcat4 PE=2 SV=1	Back alignment and function description

>sp\|Q8NF37\|PCAT1_HUMAN Lysophosphatidylcholine acyltransferase 1 OS=Homo sapiens GN=LPCAT1 PE=1 SV=2	Back alignment and function description

>sp\|Q6DCK1\|LPCT4_XENLA Lysophospholipid acyltransferase LPCAT4 OS=Xenopus laevis GN=lpcat4 PE=2 SV=2	Back alignment and function description

>sp\|Q0KHU5\|PCAT1_DROME 1-acylglycerophosphocholine O-acyltransferase 1 OS=Drosophila melanogaster GN=CG32699 PE=2 SV=1	Back alignment and function description

>sp\|Q7L5N7\|PCAT2_HUMAN Lysophosphatidylcholine acyltransferase 2 OS=Homo sapiens GN=LPCAT2 PE=1 SV=1	Back alignment and function description

>sp\|Q1HAQ0\|PCAT1_RAT Lysophosphatidylcholine acyltransferase 1 OS=Rattus norvegicus GN=Lpcat1 PE=2 SV=2	Back alignment and function description

>sp\|Q3TFD2\|PCAT1_MOUSE Lysophosphatidylcholine acyltransferase 1 OS=Mus musculus GN=Lpcat1 PE=1 SV=1	Back alignment and function description

>sp\|P0C1Q3\|PCAT2_RAT Lysophosphatidylcholine acyltransferase 2 OS=Rattus norvegicus GN=Lpcat2 PE=2 SV=1	Back alignment and function description

Close Homologs in the Non-Redundant Database Detected by BLAST

Original result of BLAST against Nonredundant Database

GI	Alignment Graph	Length	Definition	Q cover	H cover	Identity	E-value
Query		361
224137214		402	predicted protein [Populus trichocarpa]	0.977	0.878	0.680	1e-150
356510241		369	PREDICTED: 1-acylglycerophosphocholine O	0.936	0.915	0.687	1e-148
255538570		382	acyltransferase, putative [Ricinus commu	0.961	0.908	0.676	1e-147
356518056		370	PREDICTED: 1-acylglycerophosphocholine O	0.939	0.916	0.684	1e-146
224063595		403	predicted protein [Populus trichocarpa]	0.969	0.868	0.671	1e-146
359492117		374	PREDICTED: lysophosphatidylcholine acylt	0.944	0.911	0.706	1e-141
357511059		382	1-acyl-sn-glycerol-3-phosphate acyltrans	0.947	0.895	0.683	1e-138
357511061		390	1-acyl-sn-glycerol-3-phosphate acyltrans	0.936	0.866	0.682	1e-136
449469993		390	PREDICTED: lysophosphatidylcholine acylt	0.958	0.887	0.643	1e-134
449496066		382	PREDICTED: lysophosphatidylcholine acylt	0.969	0.916	0.636	1e-134

>gi\|224137214\|ref\|XP_002327070.1\| predicted protein [Populus trichocarpa] gi\|222835385\|gb\|EEE73820.1\| predicted protein [Populus trichocarpa]	Back alignment and taxonomy information

 Score =  538 bits (1387), Expect = e-150,   Method: Compositional matrix adjust.
 Identities = 271/398 (68%), Positives = 313/398 (78%), Gaps = 45/398 (11%)

Query: 1   MESELKDLNSKQLK----STASSDDGGSAKDDRPLLKPDA-------ADNIQELEKKFAP 49
           M++ELK +N    K      AS DDG ++KDDRPLLK D+        ++I+ELEKKFA 
Sbjct: 1   MDTELKSMNPDPPKPEQPDPASRDDGSNSKDDRPLLKSDSNRISSTTGESIEELEKKFAA 60

Query: 50  YVRNDVYGTMGRGELPLAEKFLIGIAMVTLLPIRVVLAMTVLVIYYLICRVCTLFSAPNR 109
           YVRNDVYG MGRGELPL EK L+GIA+VTL+PIR VLA+ +LV+YY+ICRVCTLFSAPNR
Sbjct: 61  YVRNDVYGPMGRGELPLVEKVLLGIAVVTLVPIRFVLALIILVVYYIICRVCTLFSAPNR 120

Query: 110 GEDE-QEDYAHMGGWRRSVVVVTGRFLSRVMLFVLGFYWITETFRILDVQEKSENEAKNQ 168
            E+E QED+AHMGGWRR+V+V  GRFLSR++LFVLGFYWI+ ++R +++ ++      N+
Sbjct: 121 DEEEEQEDFAHMGGWRRAVIVWCGRFLSRMLLFVLGFYWISVSYRDIELPDQ------NK 174

Query: 169 SKDEDEAKDQDEESGRPGAIISNHVSYLDILYHMSSSFPSFVAKRSVAKLPLVGLISKCL 228
           S  ++E KDQ EE  R GAIISNHVSYLDILYHMS+SFPSFVAKRSVAKLPLVGLISKCL
Sbjct: 175 SSSQNEGKDQSEEPERLGAIISNHVSYLDILYHMSASFPSFVAKRSVAKLPLVGLISKCL 234

Query: 229 GCVYVQRESKSSDFKGVSGVVTERVREAHRDKSAPMMMLFPEGTTTNGDYLLPFKTGAFL 288
           GCVYVQRESKSSDFKGVSG+VTERV+E+H + SAPMMMLFPEGTTTNGD+LLPFKTGAFL
Sbjct: 235 GCVYVQRESKSSDFKGVSGIVTERVKESHENSSAPMMMLFPEGTTTNGDFLLPFKTGAFL 294

Query: 289 ARAPVLPVILRYPYQRFSPAWDSISG---------------------------QEKDDPK 321
           A APV PVILRYPYQRFSPAWDSISG                           +EKDDPK
Sbjct: 295 ATAPVRPVILRYPYQRFSPAWDSISGALHVFYLFCQFINHMEAVWLPVYYPSQEEKDDPK 354

Query: 322 LYAENVRRLMASERNLILSDIGLAEKRIYHAALNGLLS 359
           LYA NVRRLMA E NL +SDIGLAEKRIYH ALNG +S
Sbjct: 355 LYASNVRRLMAREGNLKMSDIGLAEKRIYHTALNGNIS 392

Source: Populus trichocarpa

Species: Populus trichocarpa

Genus: Populus

Family: Salicaceae

Order: Malpighiales

Class:

Phylum: Streptophyta

Superkingdom: Eukaryota

>gi\|356510241\|ref\|XP_003523848.1\| PREDICTED: 1-acylglycerophosphocholine O-acyltransferase 1-like [Glycine max]	Back alignment and taxonomy information

>gi\|255538570\|ref\|XP_002510350.1\| acyltransferase, putative [Ricinus communis] gi\|223551051\|gb\|EEF52537.1\| acyltransferase, putative [Ricinus communis]	Back alignment and taxonomy information

>gi\|356518056\|ref\|XP_003527700.1\| PREDICTED: 1-acylglycerophosphocholine O-acyltransferase 1-like [Glycine max]	Back alignment and taxonomy information

>gi\|224063595\|ref\|XP_002301219.1\| predicted protein [Populus trichocarpa] gi\|222842945\|gb\|EEE80492.1\| predicted protein [Populus trichocarpa]	Back alignment and taxonomy information

>gi\|359492117\|ref\|XP_002283301.2\| PREDICTED: lysophosphatidylcholine acyltransferase 1-like [Vitis vinifera] gi\|302142453\|emb\|CBI19656.3\| unnamed protein product [Vitis vinifera]	Back alignment and taxonomy information

>gi\|357511059\|ref\|XP_003625818.1\| 1-acyl-sn-glycerol-3-phosphate acyltransferase [Medicago truncatula] gi\|355500833\|gb\|AES82036.1\| 1-acyl-sn-glycerol-3-phosphate acyltransferase [Medicago truncatula]	Back alignment and taxonomy information

>gi\|357511061\|ref\|XP_003625819.1\| 1-acyl-sn-glycerol-3-phosphate acyltransferase [Medicago truncatula] gi\|355500834\|gb\|AES82037.1\| 1-acyl-sn-glycerol-3-phosphate acyltransferase [Medicago truncatula]	Back alignment and taxonomy information

>gi\|449469993\|ref\|XP_004152703.1\| PREDICTED: lysophosphatidylcholine acyltransferase 1-like [Cucumis sativus]	Back alignment and taxonomy information

>gi\|449496066\|ref\|XP_004160028.1\| PREDICTED: lysophosphatidylcholine acyltransferase 1-like isoform 2 [Cucumis sativus]	Back alignment and taxonomy information

Prediction of Gene Ontology (GO) Terms

Close Homologs with Gene Ontology terms Detected by BLAST

Original result of BLAST against Gene Ontology (AMIGO)

ID	Alignment graph	Length	Definition	Q cover	H cover	Identity	E-value
Query		361
TAIR\|locus:2025807		398	AT1G80950 [Arabidopsis thalian	0.844	0.766	0.633	4.7e-118
TAIR\|locus:2043639		539	AT2G45670 [Arabidopsis thalian	0.335	0.224	0.404	1.1e-24
ZFIN\|ZDB-GENE-030131-5777		508	lpcat4 "lysophosphatidylcholin	0.335	0.238	0.4	1.3e-22
UNIPROTKB\|J9NSM6		485	LPCAT1 "Uncharacterized protei	0.321	0.239	0.363	1.2e-20
UNIPROTKB\|F1PJ28		534	LPCAT1 "Uncharacterized protei	0.326	0.220	0.338	1.4e-19
UNIPROTKB\|F1NME3		525	LPCAT1 "Uncharacterized protei	0.318	0.219	0.347	1.4e-18
ZFIN\|ZDB-GENE-060503-915		517	lpcat1 "lysophosphatidylcholin	0.332	0.232	0.352	1.5e-18
FB\|FBgn0052699		533	CG32699 [Drosophila melanogast	0.337	0.228	0.390	2.5e-18
UNIPROTKB\|Q7L5N7		544	LPCAT2 "Lysophosphatidylcholin	0.335	0.222	0.304	5.5e-18
UNIPROTKB\|Q8NF37		534	LPCAT1 "Lysophosphatidylcholin	0.321	0.217	0.355	9.7e-18

TAIR\|locus:2025807 AT1G80950 [Arabidopsis thaliana (taxid:3702)]	Back alignment and assigned GO terms

 Score = 997 (356.0 bits), Expect = 4.7e-118, Sum P(2) = 4.7e-118
 Identities = 206/325 (63%), Positives = 236/325 (72%)

Query:     1 MESELKDLNSKQLXXXXXXXXXXXXXXXRPLLKP--DAADNIQELEKKFAPYVRNDVYGT 58
             MESELKDLNS                  RPLLK   D A  I+EL+KKFAPY R D+YGT
Sbjct:     1 MESELKDLNSNS--------NPPSSKEDRPLLKSESDLAAAIEELDKKFAPYARTDLYGT 52

Query:    59 MGRGELPLAEKFLIGIAMVTLLPIRVVLAMTVLVIYYLICRVCTLFSAPNRG----EDE- 113
             MG G  P+ E   + +A+VTL+P+R +L+M++L++YYLICRV TLFSAP RG    EDE 
Sbjct:    53 MGLGPFPMTENIKLAVALVTLVPLRFLLSMSILLLYYLICRVFTLFSAPYRGPEEEEDEG 112

Query:   114 ----QEDYAHMGGWRRSVVVVTGRFLSRVMLFVLGFYWITETFRILDVQEKSENEAKNXX 169
                 QEDYAHM GW+R+V+V +GRFLSRV+LFV GFYWI E+    D  +   N      
Sbjct:   113 GVVFQEDYAHMEGWKRTVIVRSGRFLSRVLLFVFGFYWIHESCPDRD-SDMDSNPKTTST 171

Query:   170 XXXXXXXXXXXXXGRPGAIISNHVSYLDILYHMSSSFPSFVAKRSVAKLPLVGLISKCLG 229
                           RPGAI+SNHVSYLDILYHMS+SFPSFVAKRSV KLPLVGLISKCLG
Sbjct:   172 EINQKGEAATEEPERPGAIVSNHVSYLDILYHMSASFPSFVAKRSVGKLPLVGLISKCLG 231

Query:   230 CVYVQRESKSSDFKGVSGVVTERVREAHRDKSAPMMMLFPEGTTTNGDYLLPFKTGAFLA 289
             CVYVQRE+KS DFKGVSG V ERVREAH +KSAP +MLFPEGTTTNGDYLL FKTGAFLA
Sbjct:   232 CVYVQREAKSPDFKGVSGTVNERVREAHSNKSAPTIMLFPEGTTTNGDYLLTFKTGAFLA 291

Query:   290 RAPVLPVILRYPYQRFSPAWDSISG 314
               PVLPVIL+YPY+RFS AWD+ISG
Sbjct:   292 GTPVLPVILKYPYERFSVAWDTISG 316

GO:0005634 "nucleus" evidence=ISM;IDA

GO:0008152 "metabolic process" evidence=IEA;ISS

GO:0016746 "transferase activity, transferring acyl groups" evidence=IEA;ISS

GO:0005783 "endoplasmic reticulum" evidence=IDA

GO:0006655 "phosphatidylglycerol biosynthetic process" evidence=RCA

TAIR\|locus:2043639 AT2G45670 [Arabidopsis thaliana (taxid:3702)]	Back alignment and assigned GO terms

ZFIN\|ZDB-GENE-030131-5777 lpcat4 "lysophosphatidylcholine acyltransferase 4" [Danio rerio (taxid:7955)]	Back alignment and assigned GO terms

UNIPROTKB\|J9NSM6 LPCAT1 "Uncharacterized protein" [Canis lupus familiaris (taxid:9615)]	Back alignment and assigned GO terms

UNIPROTKB\|F1PJ28 LPCAT1 "Uncharacterized protein" [Canis lupus familiaris (taxid:9615)]	Back alignment and assigned GO terms

UNIPROTKB\|F1NME3 LPCAT1 "Uncharacterized protein" [Gallus gallus (taxid:9031)]	Back alignment and assigned GO terms

ZFIN\|ZDB-GENE-060503-915 lpcat1 "lysophosphatidylcholine acyltransferase 1" [Danio rerio (taxid:7955)]	Back alignment and assigned GO terms

FB\|FBgn0052699 CG32699 [Drosophila melanogaster (taxid:7227)]	Back alignment and assigned GO terms

UNIPROTKB\|Q7L5N7 LPCAT2 "Lysophosphatidylcholine acyltransferase 2" [Homo sapiens (taxid:9606)]	Back alignment and assigned GO terms

UNIPROTKB\|Q8NF37 LPCAT1 "Lysophosphatidylcholine acyltransferase 1" [Homo sapiens (taxid:9606)]	Back alignment and assigned GO terms

Prediction of Enzyme Commission (EC) Number

EC Number Prediction by Annotation Transfer from SWISS-PROT Entries

Original result of BLAST against SWISS-PROT

No confident hit for EC number transfering in SWISSPROT detected by BLAST

EC Number Prediction by Ezypred Server

Original result from Ezypred Server

Fail to connect to Ezypred Server

EC Number Prediction by EFICAz Software

Prediction Level	EC number	Confidence of Prediction
3rd Layer	2.3.1.51	0.737
3rd Layer	2.3.1	0.691

Prediction of Functionally Associated Proteins

Functionally Associated Proteins Detected by STRING

Original result from the STRING server

Fail to connect to STRING server

Conserved Domains and Related Protein Families

Conserved Domains Detected by RPS-BLAST

Original result of RPS-BLAST against CDD database part I

ID	Alignment Graph	Length	Definition	E-value
Query		361
cd07991		211	cd07991, LPLAT_LPCAT1-like, Lysophospholipid Acylt	6e-64
cd07989		184	cd07989, LPLAT_AGPAT-like, Lysophospholipid Acyltr	5e-25
smart00563		118	smart00563, PlsC, Phosphate acyltransferases	4e-24
pfam01553		131	pfam01553, Acyltransferase, Acyltransferase	7e-21
TIGR00530		130	TIGR00530, AGP_acyltrn, 1-acyl-sn-glycerol-3-phosp	2e-19
COG0204		255	COG0204, PlsC, 1-acyl-sn-glycerol-3-phosphate acyl	3e-18
PLN02833		376	PLN02833, PLN02833, glycerol acyltransferase famil	2e-09
PLN02901		214	PLN02901, PLN02901, 1-acyl-sn-glycerol-3-phosphate	2e-09
PRK15018		245	PRK15018, PRK15018, 1-acyl-sn-glycerol-3-phosphate	2e-08
cd06551		187	cd06551, LPLAT, Lysophospholipid acyltransferases	2e-08
cd07992		203	cd07992, LPLAT_AAK14816-like, Lysophospholipid Acy	6e-07
cd07990		193	cd07990, LPLAT_LCLAT1-like, Lysophospholipid Acylt	2e-06
PRK08633		1146	PRK08633, PRK08633, 2-acyl-glycerophospho-ethanola	3e-04

>gnl\|CDD\|153253 cd07991, LPLAT_LPCAT1-like, Lysophospholipid Acyltransferases (LPLATs) of Glycerophospholipid Biosynthesis: LPCAT1-like	Back alignment and domain information

 Score =  202 bits (515), Expect = 6e-64
 Identities = 76/241 (31%), Positives = 108/241 (44%), Gaps = 60/241 (24%)

Query: 137 RVMLFVLGFYWITETFRILDVQEKSENEAKNQSKDEDEAKDQDEESGRPGAIISNHVSYL 196
           RV+LF  GFY I                             + +    P  I++NH S++
Sbjct: 2   RVLLFAFGFYVIKV-------------------------HGKPDPPEAPRIIVANHTSFI 36

Query: 197 DILYHMSSSFPSFVAKRSVAKLPLVGLISKCLGCVYVQRESKSSDFKGVSGVVTERVREA 256
           D L   S  FPS VAK+ + KLP +G I + LGC++V R             V E ++E 
Sbjct: 37  DPLILFSDLFPSIVAKKELGKLPFIGTILRALGCIFVDRSEPKD-----RKKVVEEIKER 91

Query: 257 HRDKSAPMMMLFPEGTTTNGDYLLPFKTGAFLARAPVLPVILRYPYQRFSPAWDSISG-- 314
             D + P +++FPEGTTTNG  L+ FK GAF    PV PV +RYP  +F  A+ + SG  
Sbjct: 92  ATDPNWPPILIFPEGTTTNGKALIMFKKGAFEPGVPVQPVAIRYPN-KFVDAFWNSSGYS 150

Query: 315 ---------------------------QEKDDPKLYAENVRRLMASERNLILSDIGLAEK 347
                                      +E +DPK +A  VR +MA++  L  +D    +K
Sbjct: 151 SLMYLFRLLTQPANVLEVEFLPVYTPSEEGEDPKEFANRVRLIMANKLGLPATDWTGEDK 210

Query: 348 R 348
           R
Sbjct: 211 R 211

Lysophospholipid acyltransferase (LPLAT) superfamily member: acyltransferases of de novo and remodeling pathways of glycerophospholipid biosynthesis which catalyze the incorporation of an acyl group from either acylCoAs or acyl-acyl carrier proteins (acylACPs) into acceptors such as glycerol 3-phosphate, dihydroxyacetone phosphate or lyso-phosphatidic acid. Included in this subgroup are such LPLATs as lysophosphatidylcholine acyltransferase 1 (LPCAT-1), glycerol-3-phosphate acyltransferase 3 (GPAT3), and similar sequences. Length = 211

>gnl\|CDD\|153251 cd07989, LPLAT_AGPAT-like, Lysophospholipid Acyltransferases (LPLATs) of Glycerophospholipid Biosynthesis: AGPAT-like	Back alignment and domain information

>gnl\|CDD\|214724 smart00563, PlsC, Phosphate acyltransferases	Back alignment and domain information

>gnl\|CDD\|216567 pfam01553, Acyltransferase, Acyltransferase	Back alignment and domain information

>gnl\|CDD\|129621 TIGR00530, AGP_acyltrn, 1-acyl-sn-glycerol-3-phosphate acyltransferases	Back alignment and domain information

>gnl\|CDD\|223282 COG0204, PlsC, 1-acyl-sn-glycerol-3-phosphate acyltransferase [Lipid metabolism]	Back alignment and domain information

>gnl\|CDD\|215447 PLN02833, PLN02833, glycerol acyltransferase family protein	Back alignment and domain information

>gnl\|CDD\|215488 PLN02901, PLN02901, 1-acyl-sn-glycerol-3-phosphate acyltransferase	Back alignment and domain information

>gnl\|CDD\|184979 PRK15018, PRK15018, 1-acyl-sn-glycerol-3-phosphate acyltransferase; Provisional	Back alignment and domain information

>gnl\|CDD\|153244 cd06551, LPLAT, Lysophospholipid acyltransferases (LPLATs) of glycerophospholipid biosynthesis	Back alignment and domain information

>gnl\|CDD\|153254 cd07992, LPLAT_AAK14816-like, Lysophospholipid Acyltransferases (LPLATs) of Glycerophospholipid Biosynthesis: Unknown AAK14816-like	Back alignment and domain information

>gnl\|CDD\|153252 cd07990, LPLAT_LCLAT1-like, Lysophospholipid Acyltransferases (LPLATs) of Glycerophospholipid Biosynthesis: LCLAT1-like	Back alignment and domain information

>gnl\|CDD\|236315 PRK08633, PRK08633, 2-acyl-glycerophospho-ethanolamine acyltransferase; Validated	Back alignment and domain information

Conserved Domains Detected by HHsearch

Original result of HHsearch against CDD database

ID	Alignment Graph	Length	Definition	Probability
Query		361
PLN02833		376	glycerol acyltransferase family protein	100.0
KOG2848		276	consensus 1-acyl-sn-glycerol-3-phosphate acyltrans	100.0
cd07991		211	LPLAT_LPCAT1-like Lysophospholipid Acyltransferase	99.98
KOG4666		412	consensus Predicted phosphate acyltransferase, con	99.97
PRK15018		245	1-acyl-sn-glycerol-3-phosphate acyltransferase; Pr	99.97
PTZ00261		355	acyltransferase; Provisional	99.93
PLN02901		214	1-acyl-sn-glycerol-3-phosphate acyltransferase	99.92
PRK14014		301	putative acyltransferase; Provisional	99.91
PLN02499		498	glycerol-3-phosphate acyltransferase	99.91
PLN02177		497	glycerol-3-phosphate acyltransferase	99.91
PLN02588		525	glycerol-3-phosphate acyltransferase	99.91
cd07988		163	LPLAT_ABO13168-like Lysophospholipid Acyltransfera	99.9
COG0204		255	PlsC 1-acyl-sn-glycerol-3-phosphate acyltransferas	99.87
cd07992		203	LPLAT_AAK14816-like Lysophospholipid Acyltransfera	99.87
cd07993		205	LPLAT_DHAPAT-like Lysophospholipid Acyltransferase	99.87
PLN02510		374	probable 1-acyl-sn-glycerol-3-phosphate acyltransf	99.85
PRK08043		718	bifunctional acyl-[acyl carrier protein] synthetas	99.85
PLN02783		315	diacylglycerol O-acyltransferase	99.84
PRK06814		1140	acylglycerophosphoethanolamine acyltransferase; Pr	99.82
PRK08633		1146	2-acyl-glycerophospho-ethanolamine acyltransferase	99.8
TIGR00530		130	AGP_acyltrn 1-acyl-sn-glycerol-3-phosphate acyltra	99.79
cd07986		210	LPLAT_ACT14924-like Lysophospholipid Acyltransfera	99.78
PLN02380		376	1-acyl-sn-glycerol-3-phosphate acyltransferase	99.78
PF01553		132	Acyltransferase: Acyltransferase; InterPro: IPR002	99.76
cd07987		212	LPLAT_MGAT-like Lysophospholipid Acyltransferases	99.75
PRK03355		783	glycerol-3-phosphate acyltransferase; Validated	99.75
smart00563		118	PlsC Phosphate acyltransferases. Function in phosp	99.74
cd07990		193	LPLAT_LCLAT1-like Lysophospholipid Acyltransferase	99.73
PRK04974		818	glycerol-3-phosphate acyltransferase; Validated	99.7
TIGR03703		799	plsB glycerol-3-phosphate O-acyltransferase. Membe	99.7
cd07985		235	LPLAT_GPAT Lysophospholipid Acyltransferases (LPLA	99.68
cd06551		187	LPLAT Lysophospholipid acyltransferases (LPLATs) o	99.68
PTZ00374		1108	dihydroxyacetone phosphate acyltransferase; Provis	99.66
cd07983		189	LPLAT_DUF374-like Lysophospholipid Acyltransferase	99.63
cd07989		184	LPLAT_AGPAT-like Lysophospholipid Acyltransferases	99.55
PRK11915		621	glycerol-3-phosphate acyltransferase; Reviewed	99.47
KOG4666		412	consensus Predicted phosphate acyltransferase, con	99.47
KOG1505		346	consensus Lysophosphatidic acid acyltransferase LP	99.41
KOG2898		354	consensus Predicted phosphate acyltransferase, con	99.4
cd07984		192	LPLAT_LABLAT-like Lysophospholipid Acyltransferase	99.21
KOG2847		286	consensus Phosphate acyltransferase [Lipid transpo	98.97
KOG3729		715	consensus Mitochondrial glycerol-3-phosphate acylt	98.9
COG2937		810	PlsB Glycerol-3-phosphate O-acyltransferase [Lipid	98.85
KOG3730		685	consensus Acyl-CoA:dihydroxyactetone-phosphate acy	98.38
PLN02349		426	glycerol-3-phosphate acyltransferase	97.73
PRK08419		298	lipid A biosynthesis lauroyl acyltransferase; Revi	97.41
COG2121		214	Uncharacterized protein conserved in bacteria [Fun	97.11
PRK07920		298	lipid A biosynthesis lauroyl acyltransferase; Prov	96.79
COG1560		308	HtrB Lauroyl/myristoyl acyltransferase [Cell envel	96.28
PF03279		295	Lip_A_acyltrans: Bacterial lipid A biosynthesis ac	95.68
PRK06553		308	lipid A biosynthesis lauroyl acyltransferase; Prov	93.89
PRK08733		306	lipid A biosynthesis lauroyl acyltransferase; Prov	93.44
PRK06860		309	lipid A biosynthesis lauroyl acyltransferase; Prov	91.64
TIGR02207		303	lipid_A_htrB lipid A biosynthesis lauroyl (or palm	91.51
PRK06946		293	lipid A biosynthesis lauroyl acyltransferase; Prov	90.59
PRK05906		454	lipid A biosynthesis lauroyl acyltransferase; Prov	89.48
PF03982		297	DAGAT: Diacylglycerol acyltransferase ; InterPro:	88.34
PRK05646		310	lipid A biosynthesis lauroyl acyltransferase; Prov	87.15
PRK08905		289	lipid A biosynthesis lauroyl acyltransferase; Vali	87.13
COG3176		292	Putative hemolysin [General function prediction on	85.27
PRK08734		305	lipid A biosynthesis lauroyl acyltransferase; Prov	85.21
PRK06628		290	lipid A biosynthesis lauroyl acyltransferase; Prov	85.08
PRK08025		305	lipid A biosynthesis palmitoleoyl acyltransferase;	84.63
PRK08706		289	lipid A biosynthesis lauroyl acyltransferase; Prov	84.5
TIGR02208		305	lipid_A_msbB lipid A biosynthesis (KDO)2-(lauroyl)	83.32
PRK05645		295	lipid A biosynthesis lauroyl acyltransferase; Prov	82.69
PRK15174		656	Vi polysaccharide export protein VexE; Provisional	82.53
PRK08943		314	lipid A biosynthesis (KDO)2-(lauroyl)-lipid IVA ac	80.85

>PLN02833 glycerol acyltransferase family protein	Back alignment and domain information

Probab=100.00  E-value=3e-33  Score=271.97  Aligned_cols=256  Identities=18%  Similarity=0.249  Sum_probs=182.5

Q ss_pred             cHHHHhhccCCceecCCCCCCCCCCCC--HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhhcCCCCCCccccc
Q 018050           39 NIQELEKKFAPYVRNDVYGTMGRGELP--LAEKFLIGIAMVTLLPIRVVLAMTVLVIYYLICRVCTLFSAPNRGEDEQED  116 (361)
Q Consensus        39 ~~~~~~~~~~p~~r~d~~g~~~~~~~~--~~~~~~~~~~~~~l~plR~~~~~~~ll~~~l~~~~~~l~~~p~~~~~~~~~  116 (361)
                      .+||+.++|++-+-..-  +   +.+.  ....+-+++.+.+|+|+|+++++++++++.++..++.++...         
T Consensus        60 ~dd~~~~~f~~~~~~~~--n---~~~~l~~~w~~g~~~ry~~L~p~R~~~~~~~~~~~~~~~~~v~~~~~~---------  125 (376)
T PLN02833         60 VDDSFTRCFKSNPPEPW--N---WNIYLFPLWCVGVVIRYGILFPVRVLLLAIGWIIFLSAFIPVHFLLKG---------  125 (376)
T ss_pred             hhhhhhhccCCCCCCCc--c---hhhHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhcCc---------
Confidence            45789999998776431  1   1222  333455566788999999999998776665554444333211         


Q ss_pred             cccccchhHHHHHHHHHHHHHHHHhhcceEEEEEeeeecchhhhhhhhhccCCcccccccccCCCCCCCEEEEeCCCChh
Q 018050          117 YAHMGGWRRSVVVVTGRFLSRVMLFVLGFYWITETFRILDVQEKSENEAKNQSKDEDEAKDQDEESGRPGAIISNHVSYL  196 (361)
Q Consensus       117 ~~~~~~~~r~l~~~~~r~l~r~ll~~~G~~~I~v~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~p~IiVsNH~S~l  196 (361)
                          ...++.+...+.+.+++.++...+. .|+++|.+.                         .+++++|+||||+|++
T Consensus       126 ----~~~r~~~~r~~v~~~~~~~~~~~~~-~i~v~G~e~-------------------------~~~~~~IiVaNH~S~l  175 (376)
T PLN02833        126 ----HKLRKKIERKLVELICSAFVASWTG-VIKYHGPRP-------------------------SRRPKQVFVANHTSMI  175 (376)
T ss_pred             ----hHHHHHHHHHHHHHHHHHHHHHhEE-EEEEECCcC-------------------------CCCCCEEEEECCCChH
Confidence                1223333444444444443332222 256665321                         2456899999999999


Q ss_pred             hHHHHhhhccceeeehhhhhhhcHHH-HHHHhcCceEEecCCCCccccchHHHHHHHHHHHHhCCCCCeEEEecCceecC
Q 018050          197 DILYHMSSSFPSFVAKRSVAKLPLVG-LISKCLGCVYVQRESKSSDFKGVSGVVTERVREAHRDKSAPMMMLFPEGTTTN  275 (361)
Q Consensus       197 D~l~l~~~~~~~fvak~~~~~~p~~g-~~~~~~g~i~V~R~~~~~~~~~~~~~~~~~l~~~~~~~~g~~lvIFPEGT~sn  275 (361)
                      |++++.+..+..+++|++....|+++ ++++..|+|+|+|.+..+     ...+.+.+++.+++++|.+|+|||||||++
T Consensus       176 Di~vL~s~~p~~~v~kk~~~~~~~~~~~~~~~~g~I~VdR~~~~~-----~~~~~~~l~~~l~~~~G~~llIFPEGTrs~  250 (376)
T PLN02833        176 DFIVLEQMTPFAVIMQKHPGWVGFLQNTILESVGCIWFNRTEAKD-----REVVAKKLRDHVQDPDRNPLLIFPEGTCVN  250 (376)
T ss_pred             HHHHHHhhcCceEEEEehhhhhHHHHHHHHHHcCcEEecCCCHHH-----HHHHHHHHHHHHHhcCCCEEEEEcCccccC
Confidence            99999988888888888887777654 889999999999976543     124456666666655678999999999999


Q ss_pred             CCCccccccccccCCCcEEEEEEEcCCCCcCCccccc---------------------------CCCCCCCHHHHHHHHH
Q 018050          276 GDYLLPFKTGAFLARAPVLPVILRYPYQRFSPAWDSI---------------------------SGQEKDDPKLYAENVR  328 (361)
Q Consensus       276 ~~~ll~Fk~Gaf~~~~pVvPv~i~y~~~~~~~~~~~~---------------------------~~~~~~~~~~~a~~Vr  328 (361)
                      ++.+++||+|+|..++|||||+|+|+.......|.+.                           ...+.+++++|+++||
T Consensus       251 ~~~l~~FK~Gaf~~g~pI~PVaI~y~~~~~~~fW~s~~~s~~~~l~~ll~~~~~~v~V~~LpPi~~~~~e~~~efA~rv~  330 (376)
T PLN02833        251 NEYTVMFKKGAFELGCTVCPIAIKYNKIFVDAFWNSRKQSFTMHLLRLMTSWAVVCDVWYLEPQTLRPGETPIEFAERVR  330 (376)
T ss_pred             CCcccccchhhHhcCCeEEEEEEEecCcccccccCCCCccHHHhHHHHhCCCceEEEEEECCCcCCCCCCCHHHHHHHHH
Confidence            9999999999999999999999999865555555420                           0135688999999999


Q ss_pred             HHHHHHhhhhhcccc
Q 018050          329 RLMASERNLILSDIG  343 (361)
Q Consensus       329 ~~ma~~l~~~~~~~~  343 (361)
                      +.|++.+|++....+
T Consensus       331 ~~Ia~~lgi~~~~wd  345 (376)
T PLN02833        331 DMIAKRAGLKKVPWD  345 (376)
T ss_pred             HHHHHhcCCCCCCCC
Confidence            999999999887643

>KOG2848 consensus 1-acyl-sn-glycerol-3-phosphate acyltransferase [Lipid transport and metabolism]	Back alignment and domain information

>cd07991 LPLAT_LPCAT1-like Lysophospholipid Acyltransferases (LPLATs) of Glycerophospholipid Biosynthesis: LPCAT1-like	Back alignment and domain information

>KOG4666 consensus Predicted phosphate acyltransferase, contains PlsC domain [Lipid transport and metabolism]	Back alignment and domain information

>PRK15018 1-acyl-sn-glycerol-3-phosphate acyltransferase; Provisional	Back alignment and domain information

>PTZ00261 acyltransferase; Provisional	Back alignment and domain information

>PLN02901 1-acyl-sn-glycerol-3-phosphate acyltransferase	Back alignment and domain information

>PRK14014 putative acyltransferase; Provisional	Back alignment and domain information

>PLN02499 glycerol-3-phosphate acyltransferase	Back alignment and domain information

>PLN02177 glycerol-3-phosphate acyltransferase	Back alignment and domain information

>PLN02588 glycerol-3-phosphate acyltransferase	Back alignment and domain information

>cd07988 LPLAT_ABO13168-like Lysophospholipid Acyltransferases (LPLATs) of Glycerophospholipid Biosynthesis: Unknown ABO13168	Back alignment and domain information

>COG0204 PlsC 1-acyl-sn-glycerol-3-phosphate acyltransferase [Lipid metabolism]	Back alignment and domain information

>cd07992 LPLAT_AAK14816-like Lysophospholipid Acyltransferases (LPLATs) of Glycerophospholipid Biosynthesis: Unknown AAK14816-like	Back alignment and domain information

>cd07993 LPLAT_DHAPAT-like Lysophospholipid Acyltransferases (LPLATs) of Glycerophospholipid Biosynthesis: GPAT-like	Back alignment and domain information

>PLN02510 probable 1-acyl-sn-glycerol-3-phosphate acyltransferase	Back alignment and domain information

>PRK08043 bifunctional acyl-[acyl carrier protein] synthetase/2-acylglycerophosphoethanolamine acyltransferase; Validated	Back alignment and domain information

>PLN02783 diacylglycerol O-acyltransferase	Back alignment and domain information

>PRK06814 acylglycerophosphoethanolamine acyltransferase; Provisional	Back alignment and domain information

>PRK08633 2-acyl-glycerophospho-ethanolamine acyltransferase; Validated	Back alignment and domain information

>TIGR00530 AGP_acyltrn 1-acyl-sn-glycerol-3-phosphate acyltransferases	Back alignment and domain information

>cd07986 LPLAT_ACT14924-like Lysophospholipid Acyltransferases (LPLATs) of Glycerophospholipid Biosynthesis: Unknown ACT14924	Back alignment and domain information

>PLN02380 1-acyl-sn-glycerol-3-phosphate acyltransferase	Back alignment and domain information

>PF01553 Acyltransferase: Acyltransferase; InterPro: IPR002123 This family contains acyltransferases involved in phospholipid biosynthesis and other proteins of unknown function []	Back alignment and domain information

>cd07987 LPLAT_MGAT-like Lysophospholipid Acyltransferases (LPLATs) of Glycerophospholipid Biosynthesis: MGAT-like	Back alignment and domain information

>PRK03355 glycerol-3-phosphate acyltransferase; Validated	Back alignment and domain information

>smart00563 PlsC Phosphate acyltransferases	Back alignment and domain information

>cd07990 LPLAT_LCLAT1-like Lysophospholipid Acyltransferases (LPLATs) of Glycerophospholipid Biosynthesis: LCLAT1-like	Back alignment and domain information

>PRK04974 glycerol-3-phosphate acyltransferase; Validated	Back alignment and domain information

>TIGR03703 plsB glycerol-3-phosphate O-acyltransferase	Back alignment and domain information

>cd07985 LPLAT_GPAT Lysophospholipid Acyltransferases (LPLATs) of Glycerophospholipid Biosynthesis: GPAT	Back alignment and domain information

>cd06551 LPLAT Lysophospholipid acyltransferases (LPLATs) of glycerophospholipid biosynthesis	Back alignment and domain information

>PTZ00374 dihydroxyacetone phosphate acyltransferase; Provisional	Back alignment and domain information

>cd07983 LPLAT_DUF374-like Lysophospholipid Acyltransferases (LPLATs) of Glycerophospholipid Biosynthesis: DUF374	Back alignment and domain information

>cd07989 LPLAT_AGPAT-like Lysophospholipid Acyltransferases (LPLATs) of Glycerophospholipid Biosynthesis: AGPAT-like	Back alignment and domain information

>PRK11915 glycerol-3-phosphate acyltransferase; Reviewed	Back alignment and domain information

>KOG4666 consensus Predicted phosphate acyltransferase, contains PlsC domain [Lipid transport and metabolism]	Back alignment and domain information

>KOG1505 consensus Lysophosphatidic acid acyltransferase LPAAT and related acyltransferases [Lipid transport and metabolism]	Back alignment and domain information

>KOG2898 consensus Predicted phosphate acyltransferase, contains PlsC domain [Lipid transport and metabolism]	Back alignment and domain information

>cd07984 LPLAT_LABLAT-like Lysophospholipid Acyltransferases (LPLATs) of Glycerophospholipid Biosynthesis: LABLAT-like	Back alignment and domain information

>KOG2847 consensus Phosphate acyltransferase [Lipid transport and metabolism]	Back alignment and domain information

>KOG3729 consensus Mitochondrial glycerol-3-phosphate acyltransferase GPAT [Lipid transport and metabolism]	Back alignment and domain information

>COG2937 PlsB Glycerol-3-phosphate O-acyltransferase [Lipid metabolism]	Back alignment and domain information

>KOG3730 consensus Acyl-CoA:dihydroxyactetone-phosphate acyltransferase DHAPAT [Lipid transport and metabolism]	Back alignment and domain information

>PLN02349 glycerol-3-phosphate acyltransferase	Back alignment and domain information

>PRK08419 lipid A biosynthesis lauroyl acyltransferase; Reviewed	Back alignment and domain information

>COG2121 Uncharacterized protein conserved in bacteria [Function unknown]	Back alignment and domain information

>PRK07920 lipid A biosynthesis lauroyl acyltransferase; Provisional	Back alignment and domain information

>COG1560 HtrB Lauroyl/myristoyl acyltransferase [Cell envelope biogenesis, outer membrane]	Back alignment and domain information

>PF03279 Lip_A_acyltrans: Bacterial lipid A biosynthesis acyltransferase; InterPro: IPR004960 Bacterial lipopolysachharides (LPS) are glycolipids that make up the outer monolayer of the outer membranes of most Gram-negative bacteria	Back alignment and domain information

>PRK06553 lipid A biosynthesis lauroyl acyltransferase; Provisional	Back alignment and domain information

>PRK08733 lipid A biosynthesis lauroyl acyltransferase; Provisional	Back alignment and domain information

>PRK06860 lipid A biosynthesis lauroyl acyltransferase; Provisional	Back alignment and domain information

>TIGR02207 lipid_A_htrB lipid A biosynthesis lauroyl (or palmitoleoyl) acyltransferase	Back alignment and domain information

>PRK06946 lipid A biosynthesis lauroyl acyltransferase; Provisional	Back alignment and domain information

>PRK05906 lipid A biosynthesis lauroyl acyltransferase; Provisional	Back alignment and domain information

>PF03982 DAGAT: Diacylglycerol acyltransferase ; InterPro: IPR007130 The terminal step of triacylglycerol (TAG) formation is catalysed by the enzyme diacylglycerol acyltransferase (DAGAT) [, ]	Back alignment and domain information

>PRK05646 lipid A biosynthesis lauroyl acyltransferase; Provisional	Back alignment and domain information

>PRK08905 lipid A biosynthesis lauroyl acyltransferase; Validated	Back alignment and domain information

>COG3176 Putative hemolysin [General function prediction only]	Back alignment and domain information

>PRK08734 lipid A biosynthesis lauroyl acyltransferase; Provisional	Back alignment and domain information

>PRK06628 lipid A biosynthesis lauroyl acyltransferase; Provisional	Back alignment and domain information

>PRK08025 lipid A biosynthesis palmitoleoyl acyltransferase; Reviewed	Back alignment and domain information

>PRK08706 lipid A biosynthesis lauroyl acyltransferase; Provisional	Back alignment and domain information

>TIGR02208 lipid_A_msbB lipid A biosynthesis (KDO)2-(lauroyl)-lipid IVA acyltransferase	Back alignment and domain information

>PRK05645 lipid A biosynthesis lauroyl acyltransferase; Provisional	Back alignment and domain information

>PRK15174 Vi polysaccharide export protein VexE; Provisional	Back alignment and domain information

>PRK08943 lipid A biosynthesis (KDO)2-(lauroyl)-lipid IVA acyltransferase; Validated	Back alignment and domain information

Homologous Structure Templates

Structure Templates Detected by BLAST

Original result of BLAST against Protein Data Bank

No homologous structure with e-value below 0.005

Structure Templates Detected by RPS-BLAST

Original result of RPS-BLAST against PDB70 database

ID	Alignment Graph	Length	Definition	E-value
Query		361
1vt4_I		1221	APAF-1 related killer DARK; drosophila apoptosome,	8e-08

>1vt4_I APAF-1 related killer DARK; drosophila apoptosome, apoptosis, programmed cell death; HET: DTP; 6.90A {Drosophila melanogaster} PDB: 3iz8_A* Length = 1221	Back alignment and structure

 Score = 53.3 bits (127), Expect = 8e-08
 Identities = 33/213 (15%), Positives = 68/213 (31%), Gaps = 38/213 (17%)

Query: 148 ITETFRILDVQEKSENEAKNQSKDEDEAKDQD-------EESGRPGAIISNHVSYLDILY 200
           ++ T R+       + E   +  +E    +          E  +P  +   ++   D LY
Sbjct: 61  VSGTLRLFWTLLSKQEEMVQKFVEEVLRINYKFLMSPIKTEQRQPSMMTRMYIEQRDRLY 120

Query: 201 HMSSSFPSFVAKRSVAKLPLVGLISKCLGCVYVQRESKSSDFKGVSGVV----TERVREA 256
           + +  F     K +V++L     + + L       E + +    + GV+    T    + 
Sbjct: 121 NDNQVFA----KYNVSRLQPYLKLRQAL------LELRPAKNVLIDGVLGSGKTWVALDV 170

Query: 257 HRDKSAPMMMLFPEGTTTNGDYLLPFKTGAFLARAPVLPVILRYPYQRFSPAWDSISGQE 316
                    M F         + L  K          +  +L+    +  P W S S   
Sbjct: 171 CLSYKVQCKMDF-------KIFWLNLKN---CNSPETVLEMLQKLLYQIDPNWTSRSDHS 220

Query: 317 KDDPKLY---AENVRRLMASERN----LILSDI 342
            +           +RRL+ S+      L+L ++
Sbjct: 221 SNIKLRIHSIQAELRRLLKSKPYENCLLVLLNV 253

PyMOL of 1vt4

Structure Templates Detected by HHsearch

Original result of HHsearch against PDB70 database

ID	Alignment Graph	Length	Definition	Probability
Query		361
1iuq_A		367	Glycerol-3-phosphate acyltransferase; open twisted	99.73

>1iuq_A Glycerol-3-phosphate acyltransferase; open twisted alpha/beta, four helix bundle; 1.55A {Cucurbita moschata} SCOP: c.112.1.1 PDB: 1k30_A	Back alignment and structure

Probab=99.73  E-value=5.5e-18  Score=161.20  Aligned_cols=157  Identities=19%  Similarity=0.192  Sum_probs=101.2

Q ss_pred             HHHHHHHHHHHHHhhcceEEEEEeeeecchhhhhhhhhccCCcccccccccCCCCCCCEEEEeCCCChhhHHHHhhhc--
Q 018050          128 VVVTGRFLSRVMLFVLGFYWITETFRILDVQEKSENEAKNQSKDEDEAKDQDEESGRPGAIISNHVSYLDILYHMSSS--  205 (361)
Q Consensus       128 ~~~~~r~l~r~ll~~~G~~~I~v~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~p~IiVsNH~S~lD~l~l~~~~--  205 (361)
                      +..+.+.|.|.++...|..   +.|.....        ++         .+..+.++++|++|||+|.+|++++...+  
T Consensus        94 ~y~~~~~~ir~li~~~~s~---V~G~e~~~--------~~---------~E~l~~~~~vIfisNHQS~~D~~vi~~~l~~  153 (367)
T 1iuq_A           94 YYIFGQNYIRPLIDFGNSF---VGNLSLFK--------DI---------EEKLQQGHNVVLISNHQTEADPAIISLLLEK  153 (367)
T ss_dssp             HHHHHHHHHGGGBCGGGCE---EECHHHHH--------HH---------HHHHHTTCEEEEEECCCCTTHHHHHHHHHTT
T ss_pred             HHHHHHHHHHHHHhhcCCE---eecchhhh--------hH---------HhhccCCCcEEEEECCccchhHHHHHHHHhh
Confidence            3346677777777766663   55543320        00         11124678999999999999999988776  


Q ss_pred             -------cceeeehhhhhhhcHHHHHH--HhcCceEEecCCC------CccccchHHHHHHHHHHHHhCCCCCeEEEecC
Q 018050          206 -------FPSFVAKRSVAKLPLVGLIS--KCLGCVYVQRESK------SSDFKGVSGVVTERVREAHRDKSAPMMMLFPE  270 (361)
Q Consensus       206 -------~~~fvak~~~~~~p~~g~~~--~~~g~i~V~R~~~------~~~~~~~~~~~~~~l~~~~~~~~g~~lvIFPE  270 (361)
                             +..||||+++.+.|+...+.  +.++||+..+.-.      .+..+.-. ...+.+.+.++.+ |..++||||
T Consensus       154 ~~~~l~~~~~fVAk~eL~~~Pl~~Pfs~g~~l~cI~~kk~id~~p~l~r~~~r~n~-ksl~~~~~~Lk~G-G~sI~IFPE  231 (367)
T 1iuq_A          154 TNPYIAENTIFVAGDRVLADPLCKPFSIGRNLICVYSKKHMFDIPELTETKRKANT-RSLKEMALLLRGG-SQLIWIAPS  231 (367)
T ss_dssp             TCHHHHHHCEEEECTHHHHCTTTHHHHHTSEEEECCCGGGTTSSGGGHHHHHHHHH-HHHHHHHHHHHHC-CCEEEECTT
T ss_pred             cccccccceEEEeehhhhcCccccchhhhhheeeEEecccCCCcchhhhhhhHHHH-HHHHHHHHHHHcC-CeEEEEeCC
Confidence                   35999999999777664331  4456777633221      00001111 1112222223322 569999999


Q ss_pred             ceecCC----CC--ccccccccc----c----CCCc--EEEEEEEcCCCCcCC
Q 018050          271 GTTTNG----DY--LLPFKTGAF----L----ARAP--VLPVILRYPYQRFSP  307 (361)
Q Consensus       271 GT~sn~----~~--ll~Fk~Gaf----~----~~~p--VvPv~i~y~~~~~~~  307 (361)
                      |||+.+    +.  ..+||+|+|    .    +++|  |+||+|. ++..+.|
T Consensus       232 GTRsR~~~~~g~l~~~~Fk~gs~~~~~~LA~ksg~P~hIvPvaI~-t~~impp  283 (367)
T 1iuq_A          232 GGRDRPDPSTGEWYPAPFDASSVDNMRRLIQHSDVPGHLFPLALL-CHDIMPP  283 (367)
T ss_dssp             CSCCCBCTTTCCBCCCCCCHHHHHHHHHHHHTSSSCEEEEEEEEE-CGGGSCC
T ss_pred             CCCCCCCCCCCccccccccchhhhHHHHHHHHcCCCceEEEEEEE-eccccCC
Confidence            999995    44  446999998    3    8999  9999999 7776755

PyMOL of 1iuq

Homologous Structure Domains

Structure Domains Detected by RPS-BLAST

Original result of RPS-BLAST against SCOP70(version1.75) database

ID	Alignment Graph	Length	Definition	E-value
Query		361
d1iuqa_		367	c.112.1.1 (A:) Glycerol-3-phosphate (1)-acyltransf	8e-07

>d1iuqa_ c.112.1.1 (A:) Glycerol-3-phosphate (1)-acyltransferase {Cushaw squash (Cucurbita moschata) [TaxId: 3662]} Length = 367	Back information, alignment and structure


class: Alpha and beta proteins (a/b)
fold: Glycerol-3-phosphate (1)-acyltransferase
superfamily: Glycerol-3-phosphate (1)-acyltransferase
family: Glycerol-3-phosphate (1)-acyltransferase
domain: Glycerol-3-phosphate (1)-acyltransferase
species: Cushaw squash (Cucurbita moschata) [TaxId: 3662]

 Score = 48.1 bits (114), Expect = 8e-07
 Identities = 25/142 (17%), Positives = 41/142 (28%), Gaps = 26/142 (18%)

Query: 181 ESGRPGAIISNHVSYLD------ILYHMSSSFP---SFVAKRSVAKLPLVGLISKCLGCV 231
           + G    +ISNH +  D      +L   +        FVA   V   PL    S     +
Sbjct: 127 QQGHNVVLISNHQTEADPAIISLLLEKTNPYIAENTIFVAGDRVLADPLCKPFSIGRNLI 186

Query: 232 YVQRESKSSDFKGVSGVVT----ERVREAHRDKSAP--MMMLFPEGTTTNGD------YL 279
            V  +    D   ++          ++E          ++ + P G     D      Y 
Sbjct: 187 CVYSKKHMFDIPELTETKRKANTRSLKEMALLLRGGSQLIWIAPSGGRDRPDPSTGEWYP 246

Query: 280 LPFKTG-----AFLARAPVLPV 296
            PF          L +   +P 
Sbjct: 247 APFDASSVDNMRRLIQHSDVPG 268

PyMOL of d1iuqa_

Homologous Domains Detected by HHsearch

Original result of HHsearch against SCOP70(version1.75) database

ID	Alignment Graph	Length	Definition	Probability
Query		361
d1iuqa_		367	Glycerol-3-phosphate (1)-acyltransferase {Cushaw s	99.59

>d1iuqa_ c.112.1.1 (A:) Glycerol-3-phosphate (1)-acyltransferase {Cushaw squash (Cucurbita moschata) [TaxId: 3662]}	Back information, alignment and structure

class: Alpha and beta proteins (a/b)
fold: Glycerol-3-phosphate (1)-acyltransferase
superfamily: Glycerol-3-phosphate (1)-acyltransferase
family: Glycerol-3-phosphate (1)-acyltransferase
domain: Glycerol-3-phosphate (1)-acyltransferase
species: Cushaw squash (Cucurbita moschata) [TaxId: 3662]

Probab=99.59  E-value=1.1e-15  Score=144.68  Aligned_cols=126  Identities=18%  Similarity=0.154  Sum_probs=88.8

Q ss_pred             CCCCCCEEEEeCCCChhhHHHHhhhc---------cceeeehhhhhhhcHHHHHHHhcCceEEecCCCCccccch-----
Q 018050          180 EESGRPGAIISNHVSYLDILYHMSSS---------FPSFVAKRSVAKLPLVGLISKCLGCVYVQRESKSSDFKGV-----  245 (361)
Q Consensus       180 ~~~~~p~IiVsNH~S~lD~l~l~~~~---------~~~fvak~~~~~~p~~g~~~~~~g~i~V~R~~~~~~~~~~-----  245 (361)
                      .+.++++|++|||+|++|+.++..++         ...|++|+++++.|++++++...|+|+|.|.....+...+     
T Consensus       126 l~~g~nVIlvSNHqS~~D~~il~~ll~~~~~~l~r~i~f~Ak~~l~~~Pl~~~f~~~~g~I~V~rk~~i~~~p~l~~~~~  205 (367)
T d1iuqa_         126 LQQGHNVVLISNHQTEADPAIISLLLEKTNPYIAENTIFVAGDRVLADPLCKPFSIGRNLICVYSKKHMFDIPELTETKR  205 (367)
T ss_dssp             HHTTCEEEEEECCCCTTHHHHHHHHHTTTCHHHHHHCEEEECTHHHHCTTTHHHHHTSEEEECCCGGGTTSSGGGHHHHH
T ss_pred             hcCCCCEEEEECCcccccHHHHHHHHhccccccccceEEEeehhhhccHHHHHHHHhCCEEEEeccccccccccccchhh
Confidence            35677899999999999998876553         2389999999999999999999999999986543221111     


Q ss_pred             --HHHHHHHHHHHHhCCCCCeEEEecCceecC----CCCcc--cccccc----c----cCCCc--EEEEEEEcCCCCcC
Q 018050          246 --SGVVTERVREAHRDKSAPMMMLFPEGTTTN----GDYLL--PFKTGA----F----LARAP--VLPVILRYPYQRFS  306 (361)
Q Consensus       246 --~~~~~~~l~~~~~~~~g~~lvIFPEGT~sn----~~~ll--~Fk~Ga----f----~~~~p--VvPv~i~y~~~~~~  306 (361)
                        .....+.+.+.+..+ |..|+|||||||++    ++.+.  +|+++.    +    .+++|  |+|++|.+++...+
T Consensus       206 ~~~~~al~~~~~lL~~G-g~~v~IfPEGTRsr~~~~dg~l~p~~F~~~~~~~~~~LA~~sgvP~hV~Pvai~~~d~~pP  283 (367)
T d1iuqa_         206 KANTRSLKEMALLLRGG-SQLIWIAPSGGRDRPDPSTGEWYPAPFDASSVDNMRRLIQHSDVPGHLFPLALLCHDIMPP  283 (367)
T ss_dssp             HHHHHHHHHHHHHHHHC-CCEEEECTTCSCCCBCTTTCCBCCCCCCHHHHHHHHHHHHTSSSCEEEEEEEEECGGGSCC
T ss_pred             hhhhHHHHHHHHHhhcC-CeEEEEeccCcccCcccccccccccccCccchHHHHHHHhcCCCCceEechhhhcccccCC
Confidence              011112222233333 35788999999985    33343  677765    2    28999  99999998765444

PyMOL of d1iuqa_