Citrus Sinensis ID: 018067

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Local Sequence Feature Prediction

Residue Number Marker
--------10--------20--------30--------40--------50--------60--------70--------80--------90-------100-------110-------120-------130-------140-------150-------160-------170-------180-------190-------200-------210-------220-------230-------240-------250-------260-------270-------280-------290-------300-------310-------320-------330-------340-------350-------360-
Protein Sequence
MGQAPEQEHPKNAFGWAAKDTSGVLSPFHFSRRATGEKDVTFKVTHCGICHSDLHMIKNEWGNTIYPIVPGHEIVGVVTEVGSKVSKFKVGDKVGVGCMVGSCRSCDSCAIDLENYCPKVIMTYANKYHDGTITYGGYSDIMVADEHFVVRIPEGTPLDATAPLLCAGITVYSPLRFYGLDKPGMHVGVVGLGGLGHVAVKFAKAMGVKVTVISTSPSKKSEAIERLGADSFLVSRDQDEMQAAMGTMDGIIDTVSAVHPLMPLIGLLKSQGKLVLVGAPEKPLELPAFSLLMGRKIVGGSMIGGMKETQEMIDFAAKHNIRADIEVIPADYVNTALERLAKADVRYRFVIDVANTMKSTP
Secondary Structure (PSIPRED)
cccccccccccEEEEEEEEccccccccEEEEccccccccEEEEEEEEcccHHHHHHHcccccccccccccccEEEEEEEEEcccccccccccEEEEcEEcccccccHHHccccccccccccEEEccccccccccccccccEEEEcccEEEEcccccccccccccccccccccHHHHHccccccccEEEEEEEccHHHHHHHHHHHcccEEEEEEcccccHHHHHHHccccEEEEcccHHHHHHHHccccEEEEcccccccHHHHHHccccccEEEEEccccccccccccccccccEEEEEcccccHHHHHHHHHHHHHccccccEEEEccccHHHHHHHHHcccccEEEEEEccccccccc
Secondary Structure Prediction (SSPRO)
ccccccEEcccEEEEEEEcccccccEEEEEEccccccccEEEEEEEEEEEcccHHHHccccccccccEEccccEEEEEEEEcccccccccccEEEEccEccccccHHHHcccccccccccEEEEcccccccccccccccEEEEEcccEEEEccccccHHHHHHHHcHHHHHHHHHHHcccccccEEEEEccccHHHHHHHHHHHHHcccEEEEEEccHHHHHHHHHccccEEEEcccccHHHHHcccccEEEEEcccHHHHHHHHHHHccccEEEEEccccccccccccEEEEccEEEEEEEccccccHHHHHHHHHHccccEEEEEEcHHHHHHHHHHHHccccEEEEEEEccccccccc
Coil and Loop (DISEMBL)
mgqapeqehpknafgwaakdtsgvlspfhfsrratgekdvtfkvthcgichsdlhmiknewgntiypivpghEIVGVVTEVgskvskfkvgdkvgvgcmvgscrscdscaidlenycpKVIMTYANkyhdgtityggysdimvadehfvvripegtpldatapllcagitvysplrfygldkpgmhvgvvGLGGLGHVAVKFAKAMGVKVTVistspskkseAIERLgadsflvsrDQDEMQAAMGTMDGIIDTVSAVHPLMPLIGLLKsqgklvlvgapekplelpafSLLMGRKIvggsmiggmkETQEMIDFAAKHNIRADIEVIPADYVNTALERLAKADVRYRFVIDVANTMKSTP
Flexible Loop (DISEMBL)
mgqapeqehpknafgwaaKDTSGVLSPFHFSrratgekdvTFKVTHCGICHSDLHMIKNEWGNTIYPIVPGHEIVGVVTEVGSKVSKFKVGDKVGVGCMVGSCRSCDSCAIDLENYCPKVIMTYANKYHDGTITYGGYSDIMVADEHFVVRIPEGTPLDATAPLLCAGITVYSPLRFYGLDKPGMHVGVVGLGGLGHVAVKFAKAMGVKVTvistspskkseaierlgadsflvsRDQDEMQAAMGTMDGIIDTVSAVHPLMPLIGLLKSQGKLVLVGAPEKPLELPAFSLLMGRKIVGGSMIGGMKETQEMIDFAAKHNIRADIEVIPADYVNTALErlakadvryRFVIDVANTMKSTP
Low Complexity Region (SEG)
MGQAPEQEHPKNAFGWAAKDTSGVLSPFHFSRRATGEKDVTFKVTHCGICHSDLHMIKNEWGNTIYPIVPGHEIVGVVTEVGSKVSKFKVGDKVGVGCMVGSCRSCDSCAIDLENYCPKVIMTYANKYHDGTITYGGYSDIMVADEHFVVRIPEGTPLDATAPLLCAGITVYSPLRFYGLDKPGMhvgvvglgglghvavKFAKAMGVKVTVISTSPSKKSEAIERLGADSFLVSRDQDEMQAAMGTMDGIIDTVSAVHPLMPLIGLLKSQGKLVLVGAPEKPLELPAFSLLMGRKIVGGSMIGGMKETQEMIDFAAKHNIRADIEVIPADYVNTALERLAKADVRYRFVIDVANTMKSTP
Disordered region (IsUnstruct)
*************FGWAAKDTSGVLSPFHFSRRATGEKDVTFKVTHCGICHSDLHMIKNEWGNTIYPIVPGHEIVGVVTEVGSKVSKFKVGDKVGVGCMVGSCRSCDSCAIDLENYCPKVIMTYANKYHDGTITYGGYSDIMVADEHFVVRIPEGTPLDATAPLLCAGITVYSPLRFYGLDKPGMHVGVVGLGGLGHVAVKFAKAMGVKVTVIS******************************MGTMDGIIDTVSAVHPLMPLIGLLKSQGKLVLVGAPEKPLELPAFSLLMGRKIVGGSMIGGMKETQEMIDFAAKHNIRADIEVIPADYVNTALERLAKADVRYRFVIDVA*******
Disordered Region (DISOPRED)
************AFGWAAKDTSGVLSPFHFSRRATGEKDVTFKVTHCGICHSDLHMIKNEWGNTIYPIVPGHEIVGVVTEVGSKVSKFKVGDKVGVGCMVGSCRSCDSCAIDLENYCPKVIMTYANKYHDGTITYGGYSDIMVADEHFVVRIPEGTPLDATAPLLCAGITVYSPLRFYGLDKPGMHVGVVGLGGLGHVAVKFAKAMGVKVTVISTSPSK***AIERLGADSFLVSRDQDEMQAAMGTMDGIIDTVSAVHPLMPLIGLLKSQGKLVLVGAPEKPLELPAFSLLMGRKIVGGSMIGGMKETQEMIDFAAKHNIRADIEVIPADYVNTALERLAKADVRYRFVID**NT*****
Disordered Region (DISEMBL)
**********KNAFGWAAKDTSGVLSPFHFSRRATGEKDVTFKVTHCGICHSDLHMIKNEWGNTIYPIVPGHEIVGVVTEVGSKVSKFKVGDKVGVGCMVGSCRSCDSCAIDLENYCPKVIMTYANKYHDGTITYGGYSDIMVADEHFVVRIPEGTPLDATAPLLCAGITVYSPLRFYGLDKPGMHVGVVGLGGLGHVAVKFAKAMGVKVTVISTSPSKKSEAIERLGADSFLVSRDQDEMQAAMGTMDGIIDTVSAVHPLMPLIGLLKSQGKLVLVGAPEKPLELPAFSLLMGRKIVGGSMIGGMKETQEMIDFAAKHNIRADIEVIPADYVNTALERLAKADVRYRFVIDVANTMKSTP
Disordered Region (DISPRO)
****PEQEHPKNAFGWAAKDTSGVLSPFHFSRRATGEKDVTFKVTHCGICHSDLHMIKNEWGNTIYPIVPGHEIVGVVTEVGSKVSKFKVGDKVGVGCMVGSCRSCDSCAIDLENYCPKVIMTYANKYHDGTITYGGYSDIMVADEHFVVRIPEGTPLDATAPLLCAGITVYSPLRFYGLDKPGMHVGVVGLGGLGHVAVKFAKAMGVKVTVISTSPSKKSEAIERLGADSFLVSRDQDEMQAAMGTMDGIIDTVSAVHPLMPLIGLLKSQGKLVLVGAPEKPLELPAFSLLMGRKIVGGSMIGGMKETQEMIDFAAKHNIRADIEVIPADYVNTALERLAKADVRYRFVIDVANT*****
Transmembrane Helix (TMHMM)
ooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooo
Transmembrane Helix (HMMTOP)
oooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooHHHHHHHHHHHHHHHHHiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiii
Transmembrane Helix (MEMSAT)
iiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiihhhhhhhhhhhhhhhhhhhhoooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooohhhhhhhhhhhhhhhhhhhhhhhhiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiii
TM Helix, Signal Peptide (MEMSAT_SVM)
ooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooohhhhhhhhhhhhhhhhiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiii
TM Helix, Signal Peptide (Phobius)
ooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooo
Signal Peptide (SignalP HMM Mode)
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Signal Peptide (SignalP NN Mode)
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Coiled Coils (COILS)
MGQAPEQEHPKNAFGWAAKDTSGVLSPFHFSRRATGEKDVTFKVTHCGICHSDLHMIKNEWGNTIYPIVPGHEIVGVVTEVGSKVSKFKVGDKVGVGCMVGSCRSCDSCAIDLENYCPKVIMTYANKYHDGTITYGGYSDIMVADEHFVVRIPEGTPLDATAPLLCAGITVYSPLRFYGLDKPGMHVGVVGLGGLGHVAVKFAKAMGVKVTVISTSPSKKSEAIERLGADSFLVSRDQDEMQAAMGTMDGIIDTVSAVHPLMPLIGLLKSQGKLVLVGAPEKPLELPAFSLLMGRKIVGGSMIGGMKETQEMIDFAAKHNIRADIEVIPADYVNTALERLAKADVRYRFVIDVANTMKSTP
Positional Conservation
no confident homologs detected

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Close Homologs for Annotation Transfer

Close Homologs in SWISS-PROT Database Detected by BLAST

Original result of BLAST against SWISS-PROT Database

ID	Length	Definition	RBH(Q2H)	RBH(H2Q)	Q cover	H cover	Identity	E-value
Query	361	2.2.26 [Sep-21-2011]
Q9ZRF1	359	Probable mannitol dehydro	N/A	no	0.983	0.988	0.808	1e-163
P93257	361	Probable mannitol dehydro	N/A	no	0.986	0.986	0.766	1e-157
Q6V4H0	360	8-hydroxygeraniol dehydro	N/A	no	0.994	0.997	0.771	1e-152
Q2KNL6	360	Geraniol dehydrogenase 1	N/A	no	0.991	0.994	0.706	1e-147
Q38707	365	Mannitol dehydrogenase OS	N/A	no	0.994	0.983	0.699	1e-146
Q02972	359	Cinnamyl alcohol dehydrog	yes	no	0.972	0.977	0.754	1e-143
P42754	337	Mannitol dehydrogenase (F	N/A	no	0.930	0.997	0.75	1e-143
Q02971	357	Cinnamyl alcohol dehydrog	no	no	0.988	1.0	0.734	1e-143
Q43138	363	Probable mannitol dehydro	N/A	no	0.980	0.975	0.691	1e-136
P42734	360	Probable cinnamyl alcohol	no	no	0.988	0.991	0.658	1e-136

>sp|Q9ZRF1|MTDH_FRAAN Probable mannitol dehydrogenase OS=Fragaria ananassa GN=CAD PE=2 SV=1

 Score =  575 bits (1483), Expect = e-163,   Method: Compositional matrix adjust.
 Identities = 287/355 (80%), Positives = 318/355 (89%)

Query: 4   APEQEHPKNAFGWAAKDTSGVLSPFHFSRRATGEKDVTFKVTHCGICHSDLHMIKNEWGN 63
           A EQEH K A GWAA+D+SGVLSPF+F RR TGEKDVTFKV +CGICHSDLHM+KNEWG 
Sbjct: 2   AIEQEHRKKASGWAARDSSGVLSPFNFYRRETGEKDVTFKVLYCGICHSDLHMVKNEWGF 61

Query: 64  TIYPIVPGHEIVGVVTEVGSKVSKFKVGDKVGVGCMVGSCRSCDSCAIDLENYCPKVIMT 123
           + YP+VPGHEIVG VTEVGSKV KFKVGD+VGVGC+VGSCRSC++C   LENYCPK I+T
Sbjct: 62  STYPLVPGHEIVGEVTEVGSKVQKFKVGDRVGVGCIVGSCRSCENCTDHLENYCPKQILT 121

Query: 124 YANKYHDGTITYGGYSDIMVADEHFVVRIPEGTPLDATAPLLCAGITVYSPLRFYGLDKP 183
           Y  KY+DG+ TYGGYSDIMVADEHF+VRIP+  PLD  APLLCAGIT YSPLR++GLDKP
Sbjct: 122 YGAKYYDGSTTYGGYSDIMVADEHFIVRIPDNLPLDGAAPLLCAGITTYSPLRYFGLDKP 181

Query: 184 GMHVGVVGLGGLGHVAVKFAKAMGVKVTVISTSPSKKSEAIERLGADSFLVSRDQDEMQA 243
           GMHVGVVGLGGLGHVAVKFAKAMGVKVTVISTSP K+ EA++ LGADSFLVSRDQD+MQA
Sbjct: 182 GMHVGVVGLGGLGHVAVKFAKAMGVKVTVISTSPKKEEEALKHLGADSFLVSRDQDQMQA 241

Query: 244 AMGTMDGIIDTVSAVHPLMPLIGLLKSQGKLVLVGAPEKPLELPAFSLLMGRKIVGGSMI 303
           A+GTMDGIIDTVSA HPL+PLIGLL S GKLV+VGAPEKPLELP F LLMGRK+V GS I
Sbjct: 242 AIGTMDGIIDTVSAQHPLLPLIGLLNSHGKLVMVGAPEKPLELPVFPLLMGRKMVAGSGI 301

Query: 304 GGMKETQEMIDFAAKHNIRADIEVIPADYVNTALERLAKADVRYRFVIDVANTMK 358
           GGMKETQEMIDFAA+HNI ADIEVIP DY+NTA+ERL KADVRYRFVID+ NT+K
Sbjct: 302 GGMKETQEMIDFAARHNITADIEVIPIDYLNTAMERLVKADVRYRFVIDIGNTLK 356

Oxidizes mannitol to mannose. Provides the initial step by which translocated mannitol is committed to central metabolism and, by regulating mannitol pool size, is important in regulating salt tolerance at the cellular level.
Fragaria ananassa (taxid: 3747)
EC: 1EC: .EC: 1EC: .EC: 1EC: .EC: 2EC: 5EC: 5

>sp|P93257|MTDH_MESCR Probable mannitol dehydrogenase OS=Mesembryanthemum crystallinum GN=ELI3 PE=2 SV=1

 Score =  554 bits (1427), Expect = e-157,   Method: Compositional matrix adjust.
 Identities = 273/356 (76%), Positives = 316/356 (88%)

Query: 4   APEQEHPKNAFGWAAKDTSGVLSPFHFSRRATGEKDVTFKVTHCGICHSDLHMIKNEWGN 63
           APE  HP+ AFGWAA+DTSG LSP  FSRRATGE+DVTFKV +CGICHSDLH IKNEWGN
Sbjct: 5   APENVHPQKAFGWAARDTSGTLSPLKFSRRATGEQDVTFKVLYCGICHSDLHYIKNEWGN 64

Query: 64  TIYPIVPGHEIVGVVTEVGSKVSKFKVGDKVGVGCMVGSCRSCDSCAIDLENYCPKVIMT 123
            +YP +PGHEIVGVVTEVG+KV  FKVGDKVGVGCMVGSCRSC+SC   LENYCPK+I+T
Sbjct: 65  AVYPAIPGHEIVGVVTEVGNKVQNFKVGDKVGVGCMVGSCRSCESCENHLENYCPKMILT 124

Query: 124 YANKYHDGTITYGGYSDIMVADEHFVVRIPEGTPLDATAPLLCAGITVYSPLRFYGLDKP 183
           Y + Y+DGT+TYGGYSDIMV +EHF VRIP+   LDATAPLLCAG+TVYSPL+ + LDKP
Sbjct: 125 YGSTYYDGTLTYGGYSDIMVVEEHFAVRIPDNMALDATAPLLCAGVTVYSPLKHFELDKP 184

Query: 184 GMHVGVVGLGGLGHVAVKFAKAMGVKVTVISTSPSKKSEAIERLGADSFLVSRDQDEMQA 243
           G+H+GVVGLGGLGH+AVKF KA G KVTVISTSP+KK EA+ RLGADSF+VSR+ ++MQ+
Sbjct: 185 GLHIGVVGLGGLGHMAVKFGKAFGAKVTVISTSPNKKDEAVNRLGADSFVVSREPEQMQS 244

Query: 244 AMGTMDGIIDTVSAVHPLMPLIGLLKSQGKLVLVGAPEKPLELPAFSLLMGRKIVGGSMI 303
           AMGT+DGIIDTVSA HPL+PL+GLLKSQGK+++VG P+KPLELP F LL GRKI+ GS I
Sbjct: 245 AMGTLDGIIDTVSAAHPLLPLLGLLKSQGKMIMVGVPDKPLELPVFPLLQGRKILAGSCI 304

Query: 304 GGMKETQEMIDFAAKHNIRADIEVIPADYVNTALERLAKADVRYRFVIDVANTMKS 359
           GGMKETQEMIDFAAKH+I++DIEV+P DYVNTA+ERL K DVRYRFVIDVANT+K+
Sbjct: 305 GGMKETQEMIDFAAKHDIKSDIEVVPMDYVNTAMERLLKGDVRYRFVIDVANTLKA 360

Oxidizes mannitol to mannose. Provides the initial step by which translocated mannitol is committed to central metabolism and, by regulating mannitol pool size, is important in regulating salt tolerance at the cellular level.

Mesembryanthemum crystallinum (taxid: 3544)

EC: 1

EC: .

EC: 1

EC: .

EC: 1

EC: .

EC: 2

EC: 5

EC: 5

>sp|Q6V4H0|10HGO_CATRO 8-hydroxygeraniol dehydrogenase OS=Catharanthus roseus GN=10HGO PE=1 SV=1

 Score =  537 bits (1384), Expect = e-152,   Method: Compositional matrix adjust.
 Identities = 277/359 (77%), Positives = 313/359 (87%)

Query: 1   MGQAPEQEHPKNAFGWAAKDTSGVLSPFHFSRRATGEKDVTFKVTHCGICHSDLHMIKNE 60
           M ++PE EHP  AFGWAA+DTSG LSPFHFSRRATGE DV FKV +CGICHSDLHMIKNE
Sbjct: 1   MAKSPEVEHPVKAFGWAARDTSGHLSPFHFSRRATGEHDVQFKVLYCGICHSDLHMIKNE 60

Query: 61  WGNTIYPIVPGHEIVGVVTEVGSKVSKFKVGDKVGVGCMVGSCRSCDSCAIDLENYCPKV 120
           WG T YPIVPGHEIVG+VTEVGSKV KFKVGDKVGVGC+VGSCR CD C  DLENYCP  
Sbjct: 61  WGFTKYPIVPGHEIVGIVTEVGSKVEKFKVGDKVGVGCLVGSCRKCDMCTKDLENYCPGQ 120

Query: 121 IMTYANKYHDGTITYGGYSDIMVADEHFVVRIPEGTPLDATAPLLCAGITVYSPLRFYGL 180
           I+TY+  Y DGT TYGGYSD+MVADEHFV+R PE  P+D  APLLCAGIT YSPLR++GL
Sbjct: 121 ILTYSATYTDGTTTYGGYSDLMVADEHFVIRWPENLPMDIGAPLLCAGITTYSPLRYFGL 180

Query: 181 DKPGMHVGVVGLGGLGHVAVKFAKAMGVKVTVISTSPSKKSEAIERLGADSFLVSRDQDE 240
           DKPG HVGVVGLGGLGHVAVKFAKA G KVTVISTS SKK EA+E+LGADSFLVSRD ++
Sbjct: 181 DKPGTHVGVVGLGGLGHVAVKFAKAFGAKVTVISTSESKKQEALEKLGADSFLVSRDPEQ 240

Query: 241 MQAAMGTMDGIIDTVSAVHPLMPLIGLLKSQGKLVLVGAPEKPLELPAFSLLMGRKIVGG 300
           M+AA  ++DGIIDTVSA+HP+MPL+ +LKS GKL+LVGAPEKPLELP+F L+ GRKI+ G
Sbjct: 241 MKAAAASLDGIIDTVSAIHPIMPLLSILKSHGKLILVGAPEKPLELPSFPLIAGRKIIAG 300

Query: 301 SMIGGMKETQEMIDFAAKHNIRADIEVIPADYVNTALERLAKADVRYRFVIDVANTMKS 359
           S IGG+KETQEMIDFAAKHN+  D+E++  DYVNTA+ERL KADV+YRFVIDVANT+KS
Sbjct: 301 SAIGGLKETQEMIDFAAKHNVLPDVELVSMDYVNTAMERLLKADVKYRFVIDVANTLKS 359

Dehydrogenase involved in the biosynthesis of oxogeranial from hydroxygeraniol, a precursor of the terpenoid indole alkaloids such as vinblastine and vincristine.

Catharanthus roseus (taxid: 4058)

EC: 1

EC: .

EC: 1

EC: .

EC: 1

EC: .

EC: 3

EC: 2

EC: 4

>sp|Q2KNL6|GEDH1_OCIBA Geraniol dehydrogenase 1 OS=Ocimum basilicum GN=GEDH1 PE=1 SV=1

 Score =  523 bits (1346), Expect = e-147,   Method: Compositional matrix adjust.
 Identities = 253/358 (70%), Positives = 298/358 (83%)

Query: 1   MGQAPEQEHPKNAFGWAAKDTSGVLSPFHFSRRATGEKDVTFKVTHCGICHSDLHMIKNE 60
           M ++PE EHP  A GWAA D SG  SPF+FSRRATGE+DV F+V +CG+CHSDLHM+KNE
Sbjct: 1   MAKSPETEHPVKALGWAATDNSGTFSPFNFSRRATGERDVQFRVLYCGVCHSDLHMVKNE 60

Query: 61  WGNTIYPIVPGHEIVGVVTEVGSKVSKFKVGDKVGVGCMVGSCRSCDSCAIDLENYCPKV 120
           WG T YPIVPGHEIVG+VTEVGSKV K K+GDKVGVG +VGSCR CD C+ DLENYC K 
Sbjct: 61  WGVTHYPIVPGHEIVGIVTEVGSKVEKVKIGDKVGVGVLVGSCRQCDQCSNDLENYCYKQ 120

Query: 121 IMTYANKYHDGTITYGGYSDIMVADEHFVVRIPEGTPLDATAPLLCAGITVYSPLRFYGL 180
           I+TY   Y DGTI  GGYSDIMVADEHF++R PE  PLDA APLLCAGIT YSPL+++GL
Sbjct: 121 ILTYGAPYLDGTIARGGYSDIMVADEHFIIRWPENFPLDAGAPLLCAGITTYSPLKYFGL 180

Query: 181 DKPGMHVGVVGLGGLGHVAVKFAKAMGVKVTVISTSPSKKSEAIERLGADSFLVSRDQDE 240
           DKPG+ VGV GLGGLGHVAVKFAKA G KVTVISTS SKK EA++ LG D F+VS D  +
Sbjct: 181 DKPGLRVGVNGLGGLGHVAVKFAKAFGTKVTVISTSLSKKEEAMQHLGVDEFVVSTDPQQ 240

Query: 241 MQAAMGTMDGIIDTVSAVHPLMPLIGLLKSQGKLVLVGAPEKPLELPAFSLLMGRKIVGG 300
           MQAA+GT+DGIIDTVSA HP++PL+ LLK  GKL++VG P+KPL+LP F L+ GR+ + G
Sbjct: 241 MQAAVGTLDGIIDTVSAPHPIVPLLSLLKPHGKLIVVGLPDKPLQLPVFPLIQGRRTIAG 300

Query: 301 SMIGGMKETQEMIDFAAKHNIRADIEVIPADYVNTALERLAKADVRYRFVIDVANTMK 358
           S IGG+KETQEMIDFAAK+NI AD+EVIP DY+NTA++RL K+DV+YRFVIDV  ++K
Sbjct: 301 SGIGGLKETQEMIDFAAKNNIVADVEVIPIDYINTAMDRLLKSDVKYRFVIDVEKSLK 358

Involved in the production of citral, a mixture of geranial and neral with a strong lemony scent. Reversibly oxidizes geraniol and nerol in equal efficiency. Also active, although at a lower efficiency, with cinnamyl alcohol.

Ocimum basilicum (taxid: 39350)

EC: 1

EC: .

EC: 1

EC: .

EC: 1

EC: .

EC: 1

EC: 8

EC: 3

>sp|Q38707|MTDH_APIGR Mannitol dehydrogenase OS=Apium graveolens GN=MTD PE=1 SV=1

 Score =  517 bits (1332), Expect = e-146,   Method: Compositional matrix adjust.
 Identities = 251/359 (69%), Positives = 297/359 (82%)

Query: 1   MGQAPEQEHPKNAFGWAAKDTSGVLSPFHFSRRATGEKDVTFKVTHCGICHSDLHMIKNE 60
           M ++ E EHP  AFGWAA+DT+G+LSPF FSRRATGEKDV  KV  CG+CHSD HMI N 
Sbjct: 1   MAKSSEIEHPVKAFGWAARDTTGLLSPFKFSRRATGEKDVRLKVLFCGVCHSDHHMIHNN 60

Query: 61  WGNTIYPIVPGHEIVGVVTEVGSKVSKFKVGDKVGVGCMVGSCRSCDSCAIDLENYCPKV 120
           WG T YPIVPGHEIVGVVTEVGSKV K KVGD VG+GC+VGSCRSC+SC  + E++C   
Sbjct: 61  WGFTTYPIVPGHEIVGVVTEVGSKVEKVKVGDNVGIGCLVGSCRSCESCCDNRESHCENT 120

Query: 121 IMTYANKYHDGTITYGGYSDIMVADEHFVVRIPEGTPLDATAPLLCAGITVYSPLRFYGL 180
           I TY + Y DGT+T+GGYSD MVADEHF++R P+  PLD+ APLLCAGIT YSPL++YGL
Sbjct: 121 IDTYGSIYFDGTMTHGGYSDTMVADEHFILRWPKNLPLDSGAPLLCAGITTYSPLKYYGL 180

Query: 181 DKPGMHVGVVGLGGLGHVAVKFAKAMGVKVTVISTSPSKKSEAIERLGADSFLVSRDQDE 240
           DKPG  +GVVGLGGLGHVAVK AKA G +VTVI  S SK+ EA+E+LGADSFL++ DQ++
Sbjct: 181 DKPGTKIGVVGLGGLGHVAVKMAKAFGAQVTVIDISESKRKEALEKLGADSFLLNSDQEQ 240

Query: 241 MQAAMGTMDGIIDTVSAVHPLMPLIGLLKSQGKLVLVGAPEKPLELPAFSLLMGRKIVGG 300
           M+ A  ++DGIIDTV   HPL PL  LLK  GKLV+VGAPEKP ELP FSLL GRK++GG
Sbjct: 241 MKGARSSLDGIIDTVPVNHPLAPLFDLLKPNGKLVMVGAPEKPFELPVFSLLKGRKLLGG 300

Query: 301 SMIGGMKETQEMIDFAAKHNIRADIEVIPADYVNTALERLAKADVRYRFVIDVANTMKS 359
           ++ GG+KETQEM+DFAAKHNI AD+EVIP DYVNTA+ERL K+DVRYRFVID+ANTM++
Sbjct: 301 TINGGIKETQEMLDFAAKHNITADVEVIPMDYVNTAMERLVKSDVRYRFVIDIANTMRT 359

Oxidizes mannitol to mannose. Provides the initial step by which translocated mannitol is committed to central metabolism and, by regulating mannitol pool size, is important in regulating salt tolerance at the cellular level.

Apium graveolens (taxid: 4045)

EC: 1

EC: .

EC: 1

EC: .

EC: 1

EC: .

EC: 2

EC: 5

EC: 5

>sp|Q02972|CADH8_ARATH Cinnamyl alcohol dehydrogenase 8 OS=Arabidopsis thaliana GN=CAD8 PE=1 SV=1

 Score =  508 bits (1309), Expect = e-143,   Method: Compositional matrix adjust.
 Identities = 265/351 (75%), Positives = 298/351 (84%)

Query: 11  KNAFGWAAKDTSGVLSPFHFSRRATGEKDVTFKVTHCGICHSDLHMIKNEWGNTIYPIVP 70
           K AFG AAKD SGVLSPF F+RR TGEKDV FKV  CGICHSDLHM+KNEWG + YP+VP
Sbjct: 7   KEAFGLAAKDNSGVLSPFSFTRRETGEKDVRFKVLFCGICHSDLHMVKNEWGMSTYPLVP 66

Query: 71  GHEIVGVVTEVGSKVSKFKVGDKVGVGCMVGSCRSCDSCAIDLENYCPKVIMTYANKYHD 130
           GHEIVGVVTEVG+KV+KFK G+KVGVGC+V SC SCDSC   +ENYCPK I TY   Y+D
Sbjct: 67  GHEIVGVVTEVGAKVTKFKTGEKVGVGCLVSSCGSCDSCTEGMENYCPKSIQTYGFPYYD 126

Query: 131 GTITYGGYSDIMVADEHFVVRIPEGTPLDATAPLLCAGITVYSPLRFYGLDKPGMHVGVV 190
            TITYGGYSD MV +E FV+RIP+  PLDA APLLCAGITVYSP++++GLDKPGMH+GVV
Sbjct: 127 NTITYGGYSDHMVCEEGFVIRIPDNLPLDAAAPLLCAGITVYSPMKYHGLDKPGMHIGVV 186

Query: 191 GLGGLGHVAVKFAKAMGVKVTVISTSPSKKSEAIERLGADSFLVSRDQDEMQAAMGTMDG 250
           GLGGLGHV VKFAKAMG KVTVISTS  K+ EAI RLGAD+FLVSRD  +++ AMGTMDG
Sbjct: 187 GLGGLGHVGVKFAKAMGTKVTVISTSEKKRDEAINRLGADAFLVSRDPKQIKDAMGTMDG 246

Query: 251 IIDTVSAVHPLMPLIGLLKSQGKLVLVGAPEKPLELPAFSLLMGRKIVGGSMIGGMKETQ 310
           IIDTVSA H L+PL+GLLK +GKLV+VGAPEKPLELP   L+  RK+V GSMIGG+KETQ
Sbjct: 247 IIDTVSATHSLLPLLGLLKHKGKLVMVGAPEKPLELPVMPLIFERKMVMGSMIGGIKETQ 306

Query: 311 EMIDFAAKHNIRADIEVIPADYVNTALERLAKADVRYRFVIDVANTMKSTP 361
           EMID A KHNI ADIE+I ADYVNTA+ERL KADVRYRFVIDVANT+K  P
Sbjct: 307 EMIDMAGKHNITADIELISADYVNTAMERLEKADVRYRFVIDVANTLKPNP 357

Involved in lignin biosynthesis. Catalyzes the final step specific for the production of lignin monomers. Catalyzes the NADPH-dependent reduction of coniferaldehyde, 5-hydroxyconiferaldehyde, sinapaldehyde, 4-coumaraldehyde and caffeyl aldehyde to their respective alcohols.

Arabidopsis thaliana (taxid: 3702)

EC: 1

EC: .

EC: 1

EC: .

EC: 1

EC: .

EC: 1

EC: 9

EC: 5

>sp|P42754|MTDH_PETCR Mannitol dehydrogenase (Fragment) OS=Petroselinum crispum GN=ELI3 PE=2 SV=1

 Score =  508 bits (1307), Expect = e-143,   Method: Compositional matrix adjust.
 Identities = 252/336 (75%), Positives = 287/336 (85%)

Query: 24  VLSPFHFSRRATGEKDVTFKVTHCGICHSDLHMIKNEWGNTIYPIVPGHEIVGVVTEVGS 83
           +LSPF FSRRATG+ DV FKV +CG+CHSDLHM+KNEWG T YPIVPGHEIVG VTEVGS
Sbjct: 1   ILSPFKFSRRATGDNDVRFKVLYCGVCHSDLHMVKNEWGMTTYPIVPGHEIVGRVTEVGS 60

Query: 84  KVSKFKVGDKVGVGCMVGSCRSCDSCAIDLENYCPKVIMTYANKYHDGTITYGGYSDIMV 143
           KV KFKVGD VGVGC+VGSC SC++C  D EN C K + TYA    DG+ITYGGY+D MV
Sbjct: 61  KVEKFKVGDAVGVGCLVGSCLSCENCDDDSENNCAKQVQTYAFTNVDGSITYGGYADSMV 120

Query: 144 ADEHFVVRIPEGTPLDATAPLLCAGITVYSPLRFYGLDKPGMHVGVVGLGGLGHVAVKFA 203
           AD+HFV+R PE  PLD+ APLLCAGIT YSPLR++GLDKPG  VGVVGLGGLGHVAVK A
Sbjct: 121 ADQHFVLRWPENLPLDSGAPLLCAGITTYSPLRYHGLDKPGTKVGVVGLGGLGHVAVKMA 180

Query: 204 KAMGVKVTVISTSPSKKSEAIERLGADSFLVSRDQDEMQAAMGTMDGIIDTVSAVHPLMP 263
           KA G  VTVISTS SKK EA+E+LGAD FLVS D D+MQAA GT+ GIIDTVSA+HP++P
Sbjct: 181 KAFGAHVTVISTSESKKQEALEKLGADEFLVSSDSDQMQAATGTLHGIIDTVSALHPVVP 240

Query: 264 LIGLLKSQGKLVLVGAPEKPLELPAFSLLMGRKIVGGSMIGGMKETQEMIDFAAKHNIRA 323
           L+GLLK  GKLV+VGAPEKPLELP F LLMGRK++ GS IGG+KETQEM+DFAA+HNI A
Sbjct: 241 LLGLLKVNGKLVMVGAPEKPLELPVFPLLMGRKVLAGSNIGGLKETQEMLDFAAQHNITA 300

Query: 324 DIEVIPADYVNTALERLAKADVRYRFVIDVANTMKS 359
           D+EVIP DYVNTA+ERL K+DVRYRFVIDVANT+K+
Sbjct: 301 DVEVIPVDYVNTAMERLVKSDVRYRFVIDVANTIKT 336

Oxidizes mannitol to mannose. Provides the initial step by which translocated mannitol is committed to central metabolism and, by regulating mannitol pool size, is important in regulating salt tolerance at the cellular level.

Petroselinum crispum (taxid: 4043)

EC: 1

EC: .

EC: 1

EC: .

EC: 1

EC: .

EC: 2

EC: 5

EC: 5

>sp|Q02971|CADH7_ARATH Cinnamyl alcohol dehydrogenase 7 OS=Arabidopsis thaliana GN=CAD7 PE=1 SV=2

 Score =  507 bits (1306), Expect = e-143,   Method: Compositional matrix adjust.
 Identities = 265/361 (73%), Positives = 303/361 (83%), Gaps = 4/361 (1%)

Query: 1   MGQAPEQEHPKNAFGWAAKDTSGVLSPFHFSRRATGEKDVTFKVTHCGICHSDLHMIKNE 60
           MG+  E+E    AFG AAKD SG+LSPF FSRRATGEKDV FKV  CGICH+DL M KNE
Sbjct: 1   MGKVLEKE----AFGLAAKDESGILSPFSFSRRATGEKDVRFKVLFCGICHTDLSMAKNE 56

Query: 61  WGNTIYPIVPGHEIVGVVTEVGSKVSKFKVGDKVGVGCMVGSCRSCDSCAIDLENYCPKV 120
           WG T YP+VPGHEIVGVVTEVG+KV KF  GDKVGVG M GSCRSCDSC    ENYCPK+
Sbjct: 57  WGLTTYPLVPGHEIVGVVTEVGAKVKKFNAGDKVGVGYMAGSCRSCDSCNDGDENYCPKM 116

Query: 121 IMTYANKYHDGTITYGGYSDIMVADEHFVVRIPEGTPLDATAPLLCAGITVYSPLRFYGL 180
           I+T   K  D T+T+GGYSD MV  E F++RIP+  PLD  APLLCAG+TVYSP++++GL
Sbjct: 117 ILTSGAKNFDDTMTHGGYSDHMVCAEDFIIRIPDNLPLDGAAPLLCAGVTVYSPMKYHGL 176

Query: 181 DKPGMHVGVVGLGGLGHVAVKFAKAMGVKVTVISTSPSKKSEAIERLGADSFLVSRDQDE 240
           DKPGMH+GVVGLGGLGHVAVKFAKAMG KVTVISTS  K+ EA+ RLGAD+FLVSRD  +
Sbjct: 177 DKPGMHIGVVGLGGLGHVAVKFAKAMGTKVTVISTSERKRDEAVTRLGADAFLVSRDPKQ 236

Query: 241 MQAAMGTMDGIIDTVSAVHPLMPLIGLLKSQGKLVLVGAPEKPLELPAFSLLMGRKIVGG 300
           M+ AMGTMDGIIDTVSA HPL+PL+GLLK++GKLV+VGAP +PLELP F L+ GRK+V G
Sbjct: 237 MKDAMGTMDGIIDTVSATHPLLPLLGLLKNKGKLVMVGAPAEPLELPVFPLIFGRKMVVG 296

Query: 301 SMIGGMKETQEMIDFAAKHNIRADIEVIPADYVNTALERLAKADVRYRFVIDVANTMKST 360
           SM+GG+KETQEM+D A KHNI ADIE+I ADYVNTA+ERLAKADV+YRFVIDVANTMK T
Sbjct: 297 SMVGGIKETQEMVDLAGKHNITADIELISADYVNTAMERLAKADVKYRFVIDVANTMKPT 356

Query: 361 P 361
           P
Sbjct: 357 P 357

Involved in lignin biosynthesis. Catalyzes the final step specific for the production of lignin monomers. Catalyzes the NADPH-dependent reduction of coniferaldehyde, 5-hydroxyconiferaldehyde, sinapaldehyde, 4-coumaraldehyde and caffeyl aldehyde to their respective alcohols.

Arabidopsis thaliana (taxid: 3702)

EC: 1

EC: .

EC: 1

EC: .

EC: 1

EC: .

EC: 1

EC: 9

EC: 5

>sp|Q43138|MTDH3_STYHU Probable mannitol dehydrogenase 3 OS=Stylosanthes humilis GN=CAD3 PE=2 SV=1

 Score =  486 bits (1251), Expect = e-136,   Method: Compositional matrix adjust.
 Identities = 247/357 (69%), Positives = 301/357 (84%), Gaps = 3/357 (0%)

Query: 6   EQEHPKNAFGWAAKDTSGVLSPFHFSRRATGEKDVTFKVTHCGICHSDLHMIKNEWGNTI 65
           E EHP+ AFGWAA+D+SG+LSPF+FSRR  GE+DV  +V +CGICH+DLHM KN++GN+I
Sbjct: 7   EFEHPRKAFGWAARDSSGLLSPFNFSRRDIGEEDVALEVLYCGICHTDLHMAKNDFGNSI 66

Query: 66  YPIVPGHEIVGVVTEVGSKVSKFKVGDKVGVGCMVGSCRSCDSCAIDLENYCPKVIMTYA 125
           YP VPGHE++G+V EVGSKV K+KVGDKVGVG  V SCRSC +C  +LENYCPK I+T  
Sbjct: 67  YPYVPGHEVIGIVAEVGSKVEKYKVGDKVGVGYFVESCRSCQNCIDNLENYCPKHILTQG 126

Query: 126 NKYHDGTITYGGYSDIMVADEHFVVRIPEGTPLDAT-APLLCAGITVYSPLRFYGLDKPG 184
           +K+ DGT TYGGYSD MV DEHFV RIPEG PLD   +  LC G + +SPL++YGLDKPG
Sbjct: 127 DKHIDGTTTYGGYSDSMVVDEHFVTRIPEGLPLDGCGSSSLCWGYS-HSPLKYYGLDKPG 185

Query: 185 MHVGVVGLGGLGHVAVKFAKAMGVKVTVISTS-PSKKSEAIERLGADSFLVSRDQDEMQA 243
           +HVGVVGLGGLGH+  KFAK  G+K+TVISTS P+KK EAI+ LGADSFLVSRD D+M+A
Sbjct: 186 LHVGVVGLGGLGHMVAKFAKTHGLKITVISTSPPTKKEEAIKNLGADSFLVSRDPDQMEA 245

Query: 244 AMGTMDGIIDTVSAVHPLMPLIGLLKSQGKLVLVGAPEKPLELPAFSLLMGRKIVGGSMI 303
              T+DGIIDTVSA H ++PLIGLLKS GKLVL+GA EKPLELP F L++GRK+VGG+++
Sbjct: 246 PKETLDGIIDTVSADHSIVPLIGLLKSHGKLVLIGAIEKPLELPPFPLILGRKLVGGTLV 305

Query: 304 GGMKETQEMIDFAAKHNIRADIEVIPADYVNTALERLAKADVRYRFVIDVANTMKST 360
           GG+KETQEMIDF+ KHN++ +IEV+P DYVN A++RLAKADV+YRFVIDVANT+K T
Sbjct: 306 GGLKETQEMIDFSPKHNVKPEIEVVPMDYVNIAMQRLAKADVKYRFVIDVANTLKPT 362

Oxidizes mannitol to mannose. Provides the initial step by which translocated mannitol is committed to central metabolism and, by regulating mannitol pool size, is important in regulating salt tolerance at the cellular level.

Stylosanthes humilis (taxid: 35628)

EC: 1

EC: .

EC: 1

EC: .

EC: 1

EC: .

EC: 2

EC: 5

EC: 5

>sp|P42734|CADH9_ARATH Probable cinnamyl alcohol dehydrogenase 9 OS=Arabidopsis thaliana GN=CAD9 PE=2 SV=2

 Score =  486 bits (1250), Expect = e-136,   Method: Compositional matrix adjust.
 Identities = 235/357 (65%), Positives = 286/357 (80%)

Query: 1   MGQAPEQEHPKNAFGWAAKDTSGVLSPFHFSRRATGEKDVTFKVTHCGICHSDLHMIKNE 60
           M ++PE EHP   FGW A+D SGVLSPFHFSRR  GE DVT K+  CG+CH+DLH IKN+
Sbjct: 1   MAKSPETEHPNKVFGWGARDKSGVLSPFHFSRRDNGENDVTVKILFCGVCHTDLHTIKND 60

Query: 61  WGNTIYPIVPGHEIVGVVTEVGSKVSKFKVGDKVGVGCMVGSCRSCDSCAIDLENYCPKV 120
           WG + YP+VPGHEIVG+ T+VG  V+KFK GD+VGVG + GSC+SC+SC  DLENYCP++
Sbjct: 61  WGYSYYPVVPGHEIVGIATKVGKNVTKFKEGDRVGVGVISGSCQSCESCDQDLENYCPQM 120

Query: 121 IMTYANKYHDGTITYGGYSDIMVADEHFVVRIPEGTPLDATAPLLCAGITVYSPLRFYGL 180
             TY     DGT  YGGYS+ +V D+ FV+R PE  P D+ APLLCAGITVYSP+++YG+
Sbjct: 121 SFTYNAIGSDGTKNYGGYSENIVVDQRFVLRFPENLPSDSGAPLLCAGITVYSPMKYYGM 180

Query: 181 DKPGMHVGVVGLGGLGHVAVKFAKAMGVKVTVISTSPSKKSEAIERLGADSFLVSRDQDE 240
            + G H+GV GLGGLGHVAVK  KA G+KVTVIS+S +K  EAI  LGADSFLV+ D  +
Sbjct: 181 TEAGKHLGVAGLGGLGHVAVKIGKAFGLKVTVISSSSTKAEEAINHLGADSFLVTTDPQK 240

Query: 241 MQAAMGTMDGIIDTVSAVHPLMPLIGLLKSQGKLVLVGAPEKPLELPAFSLLMGRKIVGG 300
           M+AA+GTMD IIDT+SAVH L PL+GLLK  GKL+ +G PEKPLELP F L++GRK+VGG
Sbjct: 241 MKAAIGTMDYIIDTISAVHALYPLLGLLKVNGKLIALGLPEKPLELPMFPLVLGRKMVGG 300

Query: 301 SMIGGMKETQEMIDFAAKHNIRADIEVIPADYVNTALERLAKADVRYRFVIDVANTM 357
           S +GGMKETQEM+DF AKHNI ADIE+I  D +NTA+ERLAK+DVRYRFVIDVAN++
Sbjct: 301 SDVGGMKETQEMLDFCAKHNITADIELIKMDEINTAMERLAKSDVRYRFVIDVANSL 357

Involved in lignin biosynthesis. May catalyze the final step specific for the production of lignin monomers, like coniferyl alcohol, sinapyl alcohol and 4-coumaryl alcohol.

Arabidopsis thaliana (taxid: 3702)

EC: 1

EC: .

EC: 1

EC: .

EC: 1

EC: .

EC: 1

EC: 9

EC: 5

Close Homologs in the Non-Redundant Database Detected by BLAST

Original result of BLAST against Nonredundant Database

GI	Length	Definition	Q cover	H cover	Identity	E-value
Query	361
255587709	362	alcohol dehydrogenase, putative [Ricinus	0.980	0.977	0.824	1e-169
255587478	359	alcohol dehydrogenase, putative [Ricinus	0.983	0.988	0.814	1e-169
224138226	362	cinnamyl alcohol dehydrogenase-like prot	0.986	0.983	0.825	1e-169
118489566	362	unknown [Populus trichocarpa x Populus d	0.986	0.983	0.823	1e-167
327202268	361	cinnamyl alcohol dehydrogenase [Sinopodo	0.997	0.997	0.819	1e-167
224104043	360	cinnamyl alcohol dehydrogenase-like prot	0.977	0.980	0.830	1e-166
358248942	362	uncharacterized protein LOC100809071 [Gl	0.986	0.983	0.806	1e-166
224144875	360	cinnamyl alcohol dehydrogenase-like prot	0.977	0.980	0.830	1e-166
224104051	360	cinnamyl alcohol dehydrogenase-like prot	0.977	0.980	0.835	1e-166
449451377	361	PREDICTED: probable mannitol dehydrogena	0.997	0.997	0.783	1e-166

>gi|255587709|ref|XP_002534367.1| alcohol dehydrogenase, putative [Ricinus communis] gi|223525426|gb|EEF28018.1| alcohol dehydrogenase, putative [Ricinus communis]

 Score =  600 bits (1546), Expect = e-169,   Method: Compositional matrix adjust.
 Identities = 292/354 (82%), Positives = 326/354 (92%)

Query: 5   PEQEHPKNAFGWAAKDTSGVLSPFHFSRRATGEKDVTFKVTHCGICHSDLHMIKNEWGNT 64
           PE++HP+ AFGWAA+D SGVLSPF FSRR TGEKDV+FKV +CG+CHSDLHM+KNEWG +
Sbjct: 6   PEKDHPRKAFGWAARDQSGVLSPFTFSRRETGEKDVSFKVLYCGMCHSDLHMVKNEWGTS 65

Query: 65  IYPIVPGHEIVGVVTEVGSKVSKFKVGDKVGVGCMVGSCRSCDSCAIDLENYCPKVIMTY 124
            YP+VPGHEIVGVVTEVGSKV K KVGDKVGVGCMVGSCRSC++C  DLENYCPK+I+TY
Sbjct: 66  TYPLVPGHEIVGVVTEVGSKVEKIKVGDKVGVGCMVGSCRSCNNCNKDLENYCPKMILTY 125

Query: 125 ANKYHDGTITYGGYSDIMVADEHFVVRIPEGTPLDATAPLLCAGITVYSPLRFYGLDKPG 184
             KY+DGT TYGGYSDIMV+DEHFVVRIP+  PLDATAPLLCAGITVYSPL++YGLDKPG
Sbjct: 126 GAKYYDGTTTYGGYSDIMVSDEHFVVRIPDNLPLDATAPLLCAGITVYSPLKYYGLDKPG 185

Query: 185 MHVGVVGLGGLGHVAVKFAKAMGVKVTVISTSPSKKSEAIERLGADSFLVSRDQDEMQAA 244
           M +GVVGLGGLGH+AVKFAKAMG KVTVISTSP+KK EAIERLGADSFLVSRDQD+M+ A
Sbjct: 186 MQLGVVGLGGLGHMAVKFAKAMGAKVTVISTSPNKKQEAIERLGADSFLVSRDQDQMKGA 245

Query: 245 MGTMDGIIDTVSAVHPLMPLIGLLKSQGKLVLVGAPEKPLELPAFSLLMGRKIVGGSMIG 304
           +GTMDGIIDTVSA+HPL PLIGLLKS GKLVLVGAPEKPLELPAF L+ GRK+VGGS IG
Sbjct: 246 IGTMDGIIDTVSAMHPLSPLIGLLKSDGKLVLVGAPEKPLELPAFPLIGGRKLVGGSCIG 305

Query: 305 GMKETQEMIDFAAKHNIRADIEVIPADYVNTALERLAKADVRYRFVIDVANTMK 358
           GMKETQEMIDFAAKH+I ADIEVIPA+YVNTA+ER+ KADVRYRFVID+ NT+K
Sbjct: 306 GMKETQEMIDFAAKHSITADIEVIPANYVNTAMERMLKADVRYRFVIDIGNTLK 359

Source: Ricinus communis

Species: Ricinus communis

Genus: Ricinus

Family: Euphorbiaceae

Order: Malpighiales

Phylum: Streptophyta

Superkingdom: Eukaryota

>gi|255587478|ref|XP_002534286.1| alcohol dehydrogenase, putative [Ricinus communis] gi|223525574|gb|EEF28097.1| alcohol dehydrogenase, putative [Ricinus communis]

 Score =  599 bits (1545), Expect = e-169,   Method: Compositional matrix adjust.
 Identities = 289/355 (81%), Positives = 324/355 (91%)

Query: 5   PEQEHPKNAFGWAAKDTSGVLSPFHFSRRATGEKDVTFKVTHCGICHSDLHMIKNEWGNT 64
           PE+EHP+ AFGWAA+D SGVLSP  FSRR TGEKDV+F+V +CG+CHSDLHM+KNEWG +
Sbjct: 3   PEEEHPRQAFGWAARDQSGVLSPLKFSRRETGEKDVSFRVMYCGMCHSDLHMVKNEWGIS 62

Query: 65  IYPIVPGHEIVGVVTEVGSKVSKFKVGDKVGVGCMVGSCRSCDSCAIDLENYCPKVIMTY 124
            YP+VPGHEIVGVVTEVGSKV KFKVG+KVGVGCMVGSCRSCD+C  DLENYCP++I+TY
Sbjct: 63  AYPLVPGHEIVGVVTEVGSKVEKFKVGEKVGVGCMVGSCRSCDNCTNDLENYCPEIILTY 122

Query: 125 ANKYHDGTITYGGYSDIMVADEHFVVRIPEGTPLDATAPLLCAGITVYSPLRFYGLDKPG 184
             KY+DGT TYGGYSDIMVA+EHFVVRIP+  PLDATAPLLCAGITVYSPL++YGLDKPG
Sbjct: 123 GAKYYDGTTTYGGYSDIMVANEHFVVRIPDNLPLDATAPLLCAGITVYSPLKYYGLDKPG 182

Query: 185 MHVGVVGLGGLGHVAVKFAKAMGVKVTVISTSPSKKSEAIERLGADSFLVSRDQDEMQAA 244
             + VVGLGGLGH+AVKFAKAMG KVTVISTSP+KK EAIERLGADSFLV+RDQD+M+ A
Sbjct: 183 TQLAVVGLGGLGHMAVKFAKAMGAKVTVISTSPNKKQEAIERLGADSFLVTRDQDQMKGA 242

Query: 245 MGTMDGIIDTVSAVHPLMPLIGLLKSQGKLVLVGAPEKPLELPAFSLLMGRKIVGGSMIG 304
           MGTMDGIIDTVSA+H L+PLIGLLKS GKLVLVGAPEKPLELPAF LL GRK+VGGS IG
Sbjct: 243 MGTMDGIIDTVSAMHLLLPLIGLLKSHGKLVLVGAPEKPLELPAFPLLAGRKMVGGSGIG 302

Query: 305 GMKETQEMIDFAAKHNIRADIEVIPADYVNTALERLAKADVRYRFVIDVANTMKS 359
           GMKETQEM+DFAAKH+I ADIEVIP DYVNTA+ER+ KADVRYRFVID+ NT+KS
Sbjct: 303 GMKETQEMLDFAAKHSITADIEVIPVDYVNTAMERMLKADVRYRFVIDIGNTLKS 357

Source: Ricinus communis

Species: Ricinus communis

Genus: Ricinus

Family: Euphorbiaceae

Order: Malpighiales

Phylum: Streptophyta

Superkingdom: Eukaryota

>gi|224138226|ref|XP_002322761.1| cinnamyl alcohol dehydrogenase-like protein [Populus trichocarpa] gi|222867391|gb|EEF04522.1| cinnamyl alcohol dehydrogenase-like protein [Populus trichocarpa]

 Score =  599 bits (1544), Expect = e-169,   Method: Compositional matrix adjust.
 Identities = 294/356 (82%), Positives = 322/356 (90%)

Query: 3   QAPEQEHPKNAFGWAAKDTSGVLSPFHFSRRATGEKDVTFKVTHCGICHSDLHMIKNEWG 62
           + PE+EHPK AFGWAA+D SGVLSPF FSRRATGEKDV FKV +CGICHSDLHM+KNEWG
Sbjct: 4   KLPEEEHPKPAFGWAARDQSGVLSPFKFSRRATGEKDVAFKVLYCGICHSDLHMVKNEWG 63

Query: 63  NTIYPIVPGHEIVGVVTEVGSKVSKFKVGDKVGVGCMVGSCRSCDSCAIDLENYCPKVIM 122
            T YP++PGHEIVGVVTEVGSKV KFKVGDKVGVGCMVGSCRSCDSC  +LENYC K I+
Sbjct: 64  VTQYPLIPGHEIVGVVTEVGSKVEKFKVGDKVGVGCMVGSCRSCDSCDNNLENYCSKKIL 123

Query: 123 TYANKYHDGTITYGGYSDIMVADEHFVVRIPEGTPLDATAPLLCAGITVYSPLRFYGLDK 182
           TY  KY+DGT+TYGGYSD MVADEHF+VRIP   PLDA APLLCAGITVYSPLR++GLDK
Sbjct: 124 TYGAKYYDGTVTYGGYSDNMVADEHFIVRIPNNLPLDAGAPLLCAGITVYSPLRYFGLDK 183

Query: 183 PGMHVGVVGLGGLGHVAVKFAKAMGVKVTVISTSPSKKSEAIERLGADSFLVSRDQDEMQ 242
           PGMHVG+VGLGGLGHVAVKFA+AMGVKVTVISTSP+KK EA+E LGADSFLVSRDQD+MQ
Sbjct: 184 PGMHVGIVGLGGLGHVAVKFARAMGVKVTVISTSPNKKQEALENLGADSFLVSRDQDQMQ 243

Query: 243 AAMGTMDGIIDTVSAVHPLMPLIGLLKSQGKLVLVGAPEKPLELPAFSLLMGRKIVGGSM 302
           AAMGT+DGIIDTVSAVHPL+PL+ LLKS GKLVLVGAPEKPLELP F L+ GRK VGGS 
Sbjct: 244 AAMGTLDGIIDTVSAVHPLLPLVALLKSHGKLVLVGAPEKPLELPVFPLITGRKTVGGSC 303

Query: 303 IGGMKETQEMIDFAAKHNIRADIEVIPADYVNTALERLAKADVRYRFVIDVANTMK 358
           +GG+KETQEMIDFAAKHNI ADIEVIP DYVNTA+ER+ KADVRYRFVIDV  T+K
Sbjct: 304 VGGIKETQEMIDFAAKHNITADIEVIPMDYVNTAMERVLKADVRYRFVIDVGKTLK 359

Source: Populus trichocarpa

Species: Populus trichocarpa

Genus: Populus

Family: Salicaceae

Order: Malpighiales

Phylum: Streptophyta

Superkingdom: Eukaryota

>gi|118489566|gb|ABK96585.1| unknown [Populus trichocarpa x Populus deltoides]

 Score =  595 bits (1534), Expect = e-167,   Method: Compositional matrix adjust.
 Identities = 293/356 (82%), Positives = 320/356 (89%)

Query: 3   QAPEQEHPKNAFGWAAKDTSGVLSPFHFSRRATGEKDVTFKVTHCGICHSDLHMIKNEWG 62
           + PE+EHPK AFGWAA+D SGVLSPF FSRRATGEKDV F V +CGICHSDLHM+KNEWG
Sbjct: 4   KLPEEEHPKPAFGWAARDQSGVLSPFKFSRRATGEKDVAFTVLYCGICHSDLHMVKNEWG 63

Query: 63  NTIYPIVPGHEIVGVVTEVGSKVSKFKVGDKVGVGCMVGSCRSCDSCAIDLENYCPKVIM 122
            T YP++PGHEIVGVVTEVGSKV KFKVGDKVGVGCMVGSCRSCDSC  +LENYC K I+
Sbjct: 64  VTQYPLIPGHEIVGVVTEVGSKVEKFKVGDKVGVGCMVGSCRSCDSCDNNLENYCSKKIL 123

Query: 123 TYANKYHDGTITYGGYSDIMVADEHFVVRIPEGTPLDATAPLLCAGITVYSPLRFYGLDK 182
           TY  KY+DGT+TYGGYSD MVADEHF+VRIP   PLDA APLLCAGITVYSPLR++GLDK
Sbjct: 124 TYGAKYYDGTVTYGGYSDNMVADEHFIVRIPNNLPLDAGAPLLCAGITVYSPLRYFGLDK 183

Query: 183 PGMHVGVVGLGGLGHVAVKFAKAMGVKVTVISTSPSKKSEAIERLGADSFLVSRDQDEMQ 242
           PGMHVG+VGLGGLGHVAVKFA+AMGVKVTVISTSP+KK EA+E LGADSFLVSRDQD+MQ
Sbjct: 184 PGMHVGIVGLGGLGHVAVKFARAMGVKVTVISTSPNKKQEALENLGADSFLVSRDQDQMQ 243

Query: 243 AAMGTMDGIIDTVSAVHPLMPLIGLLKSQGKLVLVGAPEKPLELPAFSLLMGRKIVGGSM 302
           AAMGT+DGIIDTVSAVHPL+PL+ LLKS GKLVLVGAPEKPLELP F L+ GRK VGGS 
Sbjct: 244 AAMGTLDGIIDTVSAVHPLLPLVALLKSHGKLVLVGAPEKPLELPVFPLITGRKTVGGSC 303

Query: 303 IGGMKETQEMIDFAAKHNIRADIEVIPADYVNTALERLAKADVRYRFVIDVANTMK 358
            GG+KETQEMIDFAAKHNI ADIEVIP DYVNTA+ER+ KADVRYRFVIDV  T+K
Sbjct: 304 FGGIKETQEMIDFAAKHNITADIEVIPMDYVNTAMERVLKADVRYRFVIDVGKTLK 359

Source: Populus trichocarpa x Populus deltoides

Species: Populus trichocarpa x Populus deltoides

Genus: Populus

Family: Salicaceae

Order: Malpighiales

Phylum: Streptophyta

Superkingdom: Eukaryota

>gi|327202268|gb|AEA36767.1| cinnamyl alcohol dehydrogenase [Sinopodophyllum hexandrum]

 Score =  592 bits (1526), Expect = e-167,   Method: Compositional matrix adjust.
 Identities = 295/360 (81%), Positives = 327/360 (90%)

Query: 1   MGQAPEQEHPKNAFGWAAKDTSGVLSPFHFSRRATGEKDVTFKVTHCGICHSDLHMIKNE 60
           M  +PEQEHPK A GWAA+DTSGVLSPF+FSRR TGEKDV FKV +CGICHSDLHM+KNE
Sbjct: 1   MVASPEQEHPKKAIGWAARDTSGVLSPFNFSRRETGEKDVAFKVLYCGICHSDLHMVKNE 60

Query: 61  WGNTIYPIVPGHEIVGVVTEVGSKVSKFKVGDKVGVGCMVGSCRSCDSCAIDLENYCPKV 120
           WG++ YP+VPGHEIVGVVTEVGSKV   KVGDKVGVGCMVGSCRSCDSCA  LENYCPK+
Sbjct: 61  WGSSTYPLVPGHEIVGVVTEVGSKVQNIKVGDKVGVGCMVGSCRSCDSCADHLENYCPKM 120

Query: 121 IMTYANKYHDGTITYGGYSDIMVADEHFVVRIPEGTPLDATAPLLCAGITVYSPLRFYGL 180
           I+T++ K +DGTITYGGYSDIMVADEHF+VRIPE  PLD  APLLCA IT YSPLR +GL
Sbjct: 121 ILTHSAKNYDGTITYGGYSDIMVADEHFIVRIPENLPLDGAAPLLCARITTYSPLRHFGL 180

Query: 181 DKPGMHVGVVGLGGLGHVAVKFAKAMGVKVTVISTSPSKKSEAIERLGADSFLVSRDQDE 240
           DKPGMHVGVVGLGGLGHVAVKFAKA+GVKVTVISTSP KK+EA+E L ADSFLVS DQ+E
Sbjct: 181 DKPGMHVGVVGLGGLGHVAVKFAKALGVKVTVISTSPKKKTEAVEHLHADSFLVSTDQNE 240

Query: 241 MQAAMGTMDGIIDTVSAVHPLMPLIGLLKSQGKLVLVGAPEKPLELPAFSLLMGRKIVGG 300
           MQAAMGTMDGIIDTVSAVHPL+PLIGLLK+QGK+V+VGAPEKPLELP F L+MGRKI+GG
Sbjct: 241 MQAAMGTMDGIIDTVSAVHPLVPLIGLLKTQGKIVMVGAPEKPLELPVFPLIMGRKIIGG 300

Query: 301 SMIGGMKETQEMIDFAAKHNIRADIEVIPADYVNTALERLAKADVRYRFVIDVANTMKST 360
           S IGGMKETQEMI+FAAKHNI ADIEVIP DYVNTA++RL KADVRYRFVID+ NT+K++
Sbjct: 301 SCIGGMKETQEMINFAAKHNITADIEVIPIDYVNTAMDRLVKADVRYRFVIDIGNTLKAS 360

Source: Sinopodophyllum hexandrum

Species: Sinopodophyllum hexandrum

Genus: Sinopodophyllum

Family: Berberidaceae

Order: Ranunculales

Phylum: Streptophyta

Superkingdom: Eukaryota

>gi|224104043|ref|XP_002313294.1| cinnamyl alcohol dehydrogenase-like protein [Populus trichocarpa] gi|222849702|gb|EEE87249.1| cinnamyl alcohol dehydrogenase-like protein [Populus trichocarpa]

 Score =  591 bits (1523), Expect = e-166,   Method: Compositional matrix adjust.
 Identities = 293/353 (83%), Positives = 317/353 (89%)

Query: 6   EQEHPKNAFGWAAKDTSGVLSPFHFSRRATGEKDVTFKVTHCGICHSDLHMIKNEWGNTI 65
           E+EHP  AFGWAA+D SGVLSPF FSRR+TGEKDV FKV  CGICHSDLHM KNEWG   
Sbjct: 7   EEEHPNKAFGWAARDQSGVLSPFKFSRRSTGEKDVRFKVLFCGICHSDLHMAKNEWGTAT 66

Query: 66  YPIVPGHEIVGVVTEVGSKVSKFKVGDKVGVGCMVGSCRSCDSCAIDLENYCPKVIMTYA 125
           YP+VPGHEIVG VTEVGSKV KFKVGDKVGVGC+VGSC SCDSC  +LENYCPK+I+TY+
Sbjct: 67  YPLVPGHEIVGEVTEVGSKVEKFKVGDKVGVGCLVGSCHSCDSCNNNLENYCPKMILTYS 126

Query: 126 NKYHDGTITYGGYSDIMVADEHFVVRIPEGTPLDATAPLLCAGITVYSPLRFYGLDKPGM 185
            KYHDGT TYGGYSD MV DEHFV+RIP+  PLDA APLLCAGITVYSPLRF+ LDKPGM
Sbjct: 127 TKYHDGTTTYGGYSDSMVTDEHFVIRIPDNLPLDAAAPLLCAGITVYSPLRFFNLDKPGM 186

Query: 186 HVGVVGLGGLGHVAVKFAKAMGVKVTVISTSPSKKSEAIERLGADSFLVSRDQDEMQAAM 245
           HVGVVGLGGLGHVAVKFAKAMGVKVTVISTSP KK EA+E LGADSFLVSRDQDEMQAA+
Sbjct: 187 HVGVVGLGGLGHVAVKFAKAMGVKVTVISTSPKKKQEALEHLGADSFLVSRDQDEMQAAV 246

Query: 246 GTMDGIIDTVSAVHPLMPLIGLLKSQGKLVLVGAPEKPLELPAFSLLMGRKIVGGSMIGG 305
           GTMDG+IDTVSA+HP++PLI LLK+QGKLVLVGAPEKPLELP F L+MGRKIVGGS IGG
Sbjct: 247 GTMDGVIDTVSAIHPILPLISLLKTQGKLVLVGAPEKPLELPVFPLIMGRKIVGGSTIGG 306

Query: 306 MKETQEMIDFAAKHNIRADIEVIPADYVNTALERLAKADVRYRFVIDVANTMK 358
           MKETQEMIDFAAK+NI ADIEVI  DYVNTA+ERL+K DVRYRFVID+ NTMK
Sbjct: 307 MKETQEMIDFAAKNNITADIEVISMDYVNTAMERLSKTDVRYRFVIDIGNTMK 359

Source: Populus trichocarpa

Species: Populus trichocarpa

Genus: Populus

Family: Salicaceae

Order: Malpighiales

Phylum: Streptophyta

Superkingdom: Eukaryota

>gi|358248942|ref|NP_001240222.1| uncharacterized protein LOC100809071 [Glycine max] gi|255642037|gb|ACU21285.1| unknown [Glycine max]

 Score =  591 bits (1523), Expect = e-166,   Method: Compositional matrix adjust.
 Identities = 287/356 (80%), Positives = 325/356 (91%)

Query: 5   PEQEHPKNAFGWAAKDTSGVLSPFHFSRRATGEKDVTFKVTHCGICHSDLHMIKNEWGNT 64
           PE EHPK  FGWAA+D+SG+LSPF+FSRR TGEKD+ FKV +CGICHSDLHM+KNEWGNT
Sbjct: 6   PEMEHPKKVFGWAARDSSGLLSPFNFSRRETGEKDLVFKVQYCGICHSDLHMLKNEWGNT 65

Query: 65  IYPIVPGHEIVGVVTEVGSKVSKFKVGDKVGVGCMVGSCRSCDSCAIDLENYCPKVIMTY 124
            YP+VPGHEI GVVTEVGSKV KFKVGD+VGVGCM+GSCRSC+SC  +LENYCPK+I+TY
Sbjct: 66  TYPLVPGHEIAGVVTEVGSKVQKFKVGDRVGVGCMIGSCRSCESCDENLENYCPKMILTY 125

Query: 125 ANKYHDGTITYGGYSDIMVADEHFVVRIPEGTPLDATAPLLCAGITVYSPLRFYGLDKPG 184
             KY DGTIT+GGYSD+MVADEHFVVRIP+  PLDA APLLCAGITVYSPLR+YGLDKPG
Sbjct: 126 GVKYFDGTITHGGYSDLMVADEHFVVRIPDNLPLDAAAPLLCAGITVYSPLRYYGLDKPG 185

Query: 185 MHVGVVGLGGLGHVAVKFAKAMGVKVTVISTSPSKKSEAIERLGADSFLVSRDQDEMQAA 244
           +++GVVGLGGLGH+AVKFAKA+G  VTVISTSP+KK EAIE +GADSF+VSR+QD+MQA 
Sbjct: 186 LNLGVVGLGGLGHMAVKFAKALGANVTVISTSPNKKKEAIENIGADSFVVSREQDQMQAV 245

Query: 245 MGTMDGIIDTVSAVHPLMPLIGLLKSQGKLVLVGAPEKPLELPAFSLLMGRKIVGGSMIG 304
           MGTMDGIIDTVSAVHPL+PLIGLLK  GKLV+VGAPEKPLELP FSLLMGRK+VGGS IG
Sbjct: 246 MGTMDGIIDTVSAVHPLVPLIGLLKPHGKLVMVGAPEKPLELPVFSLLMGRKMVGGSSIG 305

Query: 305 GMKETQEMIDFAAKHNIRADIEVIPADYVNTALERLAKADVRYRFVIDVANTMKST 360
           GMKETQEMIDFAAKH ++ DIEVIP DYVNTA+ERLAKADV+YRFVID+ NT+K +
Sbjct: 306 GMKETQEMIDFAAKHGVKPDIEVIPIDYVNTAIERLAKADVKYRFVIDIGNTLKPS 361

Source: Glycine max

Species: Glycine max

Genus: Glycine

Family: Fabaceae

Order: Fabales

Phylum: Streptophyta

Superkingdom: Eukaryota

>gi|224144875|ref|XP_002336182.1| cinnamyl alcohol dehydrogenase-like protein [Populus trichocarpa] gi|222831876|gb|EEE70353.1| cinnamyl alcohol dehydrogenase-like protein [Populus trichocarpa]

 Score =  591 bits (1523), Expect = e-166,   Method: Compositional matrix adjust.
 Identities = 293/353 (83%), Positives = 317/353 (89%)

Query: 6   EQEHPKNAFGWAAKDTSGVLSPFHFSRRATGEKDVTFKVTHCGICHSDLHMIKNEWGNTI 65
           E+EHP  AFGWAA+D SGVLSPF FSRR+TGEKDV FKV  CGICHSDLHM KNEWG   
Sbjct: 7   EEEHPTKAFGWAARDQSGVLSPFKFSRRSTGEKDVRFKVLFCGICHSDLHMAKNEWGTAT 66

Query: 66  YPIVPGHEIVGVVTEVGSKVSKFKVGDKVGVGCMVGSCRSCDSCAIDLENYCPKVIMTYA 125
           YP+VPGHEIVG VTEVGSKV KFKVGDKVGVGC+VGSC SCDSC  +LENYCPK+I+TY+
Sbjct: 67  YPLVPGHEIVGEVTEVGSKVEKFKVGDKVGVGCLVGSCHSCDSCNNNLENYCPKMILTYS 126

Query: 126 NKYHDGTITYGGYSDIMVADEHFVVRIPEGTPLDATAPLLCAGITVYSPLRFYGLDKPGM 185
            KYHDGT TYGGYSD MV DEHFV+RIP+  PLDA APLLCAGITVYSPLRF+ LDKPGM
Sbjct: 127 TKYHDGTTTYGGYSDSMVTDEHFVIRIPDNLPLDAAAPLLCAGITVYSPLRFFNLDKPGM 186

Query: 186 HVGVVGLGGLGHVAVKFAKAMGVKVTVISTSPSKKSEAIERLGADSFLVSRDQDEMQAAM 245
           HVGVVGLGGLGHVAVKFAKAMGVKVTVISTSP KK EA+E LGADSFLVSRDQDEMQAA+
Sbjct: 187 HVGVVGLGGLGHVAVKFAKAMGVKVTVISTSPKKKQEALEHLGADSFLVSRDQDEMQAAV 246

Query: 246 GTMDGIIDTVSAVHPLMPLIGLLKSQGKLVLVGAPEKPLELPAFSLLMGRKIVGGSMIGG 305
           GTMDG+IDTVSA+HP++PLI LLK+QGKLVLVGAPEKPLELP F L+MGRKIVGGS IGG
Sbjct: 247 GTMDGVIDTVSAIHPILPLISLLKTQGKLVLVGAPEKPLELPVFPLIMGRKIVGGSTIGG 306

Query: 306 MKETQEMIDFAAKHNIRADIEVIPADYVNTALERLAKADVRYRFVIDVANTMK 358
           MKETQEMIDFAAK+NI ADIEVI  DYVNTA+ERL+K DVRYRFVID+ NTMK
Sbjct: 307 MKETQEMIDFAAKNNITADIEVISMDYVNTAMERLSKTDVRYRFVIDIGNTMK 359

Source: Populus trichocarpa

Species: Populus trichocarpa

Genus: Populus

Family: Salicaceae

Order: Malpighiales

Phylum: Streptophyta

Superkingdom: Eukaryota

>gi|224104051|ref|XP_002313297.1| cinnamyl alcohol dehydrogenase-like protein [Populus trichocarpa] gi|222849705|gb|EEE87252.1| cinnamyl alcohol dehydrogenase-like protein [Populus trichocarpa]

 Score =  590 bits (1522), Expect = e-166,   Method: Compositional matrix adjust.
 Identities = 295/353 (83%), Positives = 316/353 (89%)

Query: 6   EQEHPKNAFGWAAKDTSGVLSPFHFSRRATGEKDVTFKVTHCGICHSDLHMIKNEWGNTI 65
           E+EHP  AFGWAA+D SGVLSPF FSRR+TGE DV FKV  CGICHSDLHM KNEWG + 
Sbjct: 7   EEEHPTKAFGWAARDQSGVLSPFKFSRRSTGENDVRFKVLFCGICHSDLHMAKNEWGTST 66

Query: 66  YPIVPGHEIVGVVTEVGSKVSKFKVGDKVGVGCMVGSCRSCDSCAIDLENYCPKVIMTYA 125
           YP+VPGHEIVG VTEVGSKV KFKVGDKVGVGCMVGSC SC SC  DLENYCPK+I+TY+
Sbjct: 67  YPLVPGHEIVGEVTEVGSKVEKFKVGDKVGVGCMVGSCHSCGSCNNDLENYCPKMILTYS 126

Query: 126 NKYHDGTITYGGYSDIMVADEHFVVRIPEGTPLDATAPLLCAGITVYSPLRFYGLDKPGM 185
            KYHDGT TYGGYSD MV DEHFVVRIP+  PLDA APLLCAGITVYSPLRF+ LDKPGM
Sbjct: 127 TKYHDGTTTYGGYSDSMVTDEHFVVRIPDNLPLDAAAPLLCAGITVYSPLRFFNLDKPGM 186

Query: 186 HVGVVGLGGLGHVAVKFAKAMGVKVTVISTSPSKKSEAIERLGADSFLVSRDQDEMQAAM 245
           HVGVVGLGGLGHVAVKFAKAMGVKVTVISTSP KK EA+E LGADSFLVSRDQDEMQAAM
Sbjct: 187 HVGVVGLGGLGHVAVKFAKAMGVKVTVISTSPKKKQEALEHLGADSFLVSRDQDEMQAAM 246

Query: 246 GTMDGIIDTVSAVHPLMPLIGLLKSQGKLVLVGAPEKPLELPAFSLLMGRKIVGGSMIGG 305
           GTMDG+IDTVSA+HP++PLI LLK+QGKLVLVGAPEKPLELP F L+MGRKIVGGS IGG
Sbjct: 247 GTMDGVIDTVSAIHPILPLISLLKTQGKLVLVGAPEKPLELPVFPLIMGRKIVGGSCIGG 306

Query: 306 MKETQEMIDFAAKHNIRADIEVIPADYVNTALERLAKADVRYRFVIDVANTMK 358
           MKETQEMIDFAAK+NI ADIEVI  DYVNTA+ERL+K DVRYRFVID+ NTMK
Sbjct: 307 MKETQEMIDFAAKNNITADIEVISMDYVNTAMERLSKTDVRYRFVIDIGNTMK 359

Source: Populus trichocarpa

Species: Populus trichocarpa

Genus: Populus

Family: Salicaceae

Order: Malpighiales

Phylum: Streptophyta

Superkingdom: Eukaryota

>gi|449451377|ref|XP_004143438.1| PREDICTED: probable mannitol dehydrogenase-like [Cucumis sativus] gi|449496398|ref|XP_004160124.1| PREDICTED: probable mannitol dehydrogenase-like [Cucumis sativus] gi|227330353|emb|CAY19192.1| somatic embryogenesis cinnamyl alcohol dehydrogenase 1 [Cucumis sativus]

 Score =  589 bits (1519), Expect = e-166,   Method: Compositional matrix adjust.
 Identities = 282/360 (78%), Positives = 324/360 (90%)

Query: 1   MGQAPEQEHPKNAFGWAAKDTSGVLSPFHFSRRATGEKDVTFKVTHCGICHSDLHMIKNE 60
           MG++P ++HPK AFGWAA DTSG+LSPFHFSRR TGE DV FKV +CGICHSDLHM+KNE
Sbjct: 1   MGKSPAEQHPKKAFGWAASDTSGILSPFHFSRRETGENDVAFKVLYCGICHSDLHMLKNE 60

Query: 61  WGNTIYPIVPGHEIVGVVTEVGSKVSKFKVGDKVGVGCMVGSCRSCDSCAIDLENYCPKV 120
           WGNTIYPIVPGHEIVG VTEVGSKV  FKVGDKVGVGCMVGSCRSCD+C+ +LENYCPK+
Sbjct: 61  WGNTIYPIVPGHEIVGEVTEVGSKVKNFKVGDKVGVGCMVGSCRSCDNCSNNLENYCPKM 120

Query: 121 IMTYANKYHDGTITYGGYSDIMVADEHFVVRIPEGTPLDATAPLLCAGITVYSPLRFYGL 180
           I+TY++K  DG+ITYGGYS+ MVADEHF+VRIP+  PL A APLLCAGITVYSPLR+YGL
Sbjct: 121 ILTYSSKESDGSITYGGYSNCMVADEHFIVRIPDSIPLHAGAPLLCAGITVYSPLRYYGL 180

Query: 181 DKPGMHVGVVGLGGLGHVAVKFAKAMGVKVTVISTSPSKKSEAIERLGADSFLVSRDQDE 240
           DKPGM +GVVGLGGLGHVAVKFAKA G KVTVISTSP+KK EAIERLGADSFLVSRDQ++
Sbjct: 181 DKPGMQIGVVGLGGLGHVAVKFAKAFGAKVTVISTSPNKKQEAIERLGADSFLVSRDQEQ 240

Query: 241 MQAAMGTMDGIIDTVSAVHPLMPLIGLLKSQGKLVLVGAPEKPLELPAFSLLMGRKIVGG 300
           MQAA GT+DGIIDTVSA HPL+PL+ L+K+ GKLV+VGAPEKPLE+PAF+L+ GRK + G
Sbjct: 241 MQAARGTLDGIIDTVSAAHPLLPLLSLIKTHGKLVMVGAPEKPLEIPAFALIGGRKTMAG 300

Query: 301 SMIGGMKETQEMIDFAAKHNIRADIEVIPADYVNTALERLAKADVRYRFVIDVANTMKST 360
           S IGGMKETQEMIDFAAKHNI AD+E+IP D VN A+ER+ K DV+YRFVID+AN++KS+
Sbjct: 301 SCIGGMKETQEMIDFAAKHNITADVEMIPMDDVNKAMERMLKQDVKYRFVIDIANSLKSS 360

Source: Cucumis sativus

Species: Cucumis sativus

Genus: Cucumis

Family: Cucurbitaceae

Order: Cucurbitales

Phylum: Streptophyta

Superkingdom: Eukaryota

---

Prediction of Gene Ontology (GO) Terms

Close Homologs with Gene Ontology terms Detected by BLAST

Original result of BLAST against Gene Ontology (AMIGO)

ID	Length	Definition	Q cover	H cover	Identity	E-value
Query	361
TAIR|locus:2005528	359	ELI3-2 "elicitor-activated gen	0.972	0.977	0.717	7.7e-135
TAIR|locus:2005527	357	ELI3-1 "elicitor-activated gen	0.972	0.983	0.706	7.9e-133
TAIR|locus:2136278	360	CAD9 "cinnamyl alcohol dehydro	0.997	1.0	0.620	4e-122
TAIR|locus:2120968	363	CAD6 "cinnamyl alcohol dehydro	0.983	0.977	0.622	6.5e-122
TAIR|locus:2052516	376	CAD2 "cinnamyl alcohol dehydro	0.955	0.917	0.622	2.7e-116
TAIR|locus:2052494	375	CAD3 "cinnamyl alcohol dehydro	0.955	0.92	0.615	3.9e-115
UNIPROTKB|Q0JA75	379	CAD7 "Cinnamyl alcohol dehydro	0.988	0.941	0.565	1e-107
TAIR|locus:2090704	365	ATCAD4 [Arabidopsis thaliana (	0.980	0.969	0.508	2.1e-91
TAIR|locus:2124311	357	CAD5 "cinnamyl alcohol dehydro	0.958	0.969	0.502	2.1e-91
UNIPROTKB|Q6ZHS4	363	CAD2 "Cinnamyl alcohol dehydro	0.958	0.953	0.494	1.2e-88

TAIR|locus:2005528 ELI3-2 "elicitor-activated gene 3-2" [Arabidopsis thaliana (taxid:3702)]

 Score = 1321 (470.1 bits), Expect = 7.7e-135, P = 7.7e-135
 Identities = 252/351 (71%), Positives = 284/351 (80%)

Query:    11 KNAFGWAAKDTSGVLSPFHFSRRATGEKDVTFKVTHCGICHSDLHMIKNEWGNTIYPIVP 70
             K AFG AAKD SGVLSPF F+RR TGEKDV FKV  CGICHSDLHM+KNEWG + YP+VP
Sbjct:     7 KEAFGLAAKDNSGVLSPFSFTRRETGEKDVRFKVLFCGICHSDLHMVKNEWGMSTYPLVP 66

Query:    71 GHEIVGVVTEVGSKVSKFKVGDKVGVGCMVGSCRSCDSCAIDLENYCPKVIMTYANKYHD 130
             GHEIVGVVTEVG+KV+KFK G+KVGVGC+V SC SCDSC   +ENYCPK I TY   Y+D
Sbjct:    67 GHEIVGVVTEVGAKVTKFKTGEKVGVGCLVSSCGSCDSCTEGMENYCPKSIQTYGFPYYD 126

Query:   131 GTITYGGYSDIMVADEHFVVRIPEGTPLDATAPLLCAGITVYSPLRFYGLDKPGMXXXXX 190
              TITYGGYSD MV +E FV+RIP+  PLDA APLLCAGITVYSP++++GLDKPGM     
Sbjct:   127 NTITYGGYSDHMVCEEGFVIRIPDNLPLDAAAPLLCAGITVYSPMKYHGLDKPGMHIGVV 186

Query:   191 XXXXXXXXXXKFAKAMGVKVTVISTSPSKKSEAIERLGADSFLVSRDQDEMQAAMGTMDG 250
                       KFAKAMG KVTVISTS  K+ EAI RLGAD+FLVSRD  +++ AMGTMDG
Sbjct:   187 GLGGLGHVGVKFAKAMGTKVTVISTSEKKRDEAINRLGADAFLVSRDPKQIKDAMGTMDG 246

Query:   251 IIDTVSAVHPLMPLIGLLKSQGKLVLVGAPEKPLELPAFSLLMGRKIVGGSMIGGMKETQ 310
             IIDTVSA H L+PL+GLLK +GKLV+VGAPEKPLELP   L+  RK+V GSMIGG+KETQ
Sbjct:   247 IIDTVSATHSLLPLLGLLKHKGKLVMVGAPEKPLELPVMPLIFERKMVMGSMIGGIKETQ 306

Query:   311 EMIDFAAKHNIRADIEVIPADYVNTALERLAKADVRYRFVIDVANTMKSTP 361
             EMID A KHNI ADIE+I ADYVNTA+ERL KADVRYRFVIDVANT+K  P
Sbjct:   307 EMIDMAGKHNITADIELISADYVNTAMERLEKADVRYRFVIDVANTLKPNP 357

GO:0000166 "nucleotide binding" evidence=IEA

GO:0005737 "cytoplasm" evidence=ISM

GO:0008270 "zinc ion binding" evidence=IEA

GO:0016491 "oxidoreductase activity" evidence=IEA

GO:0055114 "oxidation-reduction process" evidence=IEA

GO:0046029 "mannitol dehydrogenase activity" evidence=IDA

GO:0047681 "aryl-alcohol dehydrogenase (NADP+) activity" evidence=IDA

GO:0009617 "response to bacterium" evidence=IEP

GO:0009626 "plant-type hypersensitive response" evidence=IGI

GO:0045551 "cinnamyl-alcohol dehydrogenase activity" evidence=IDA

GO:0009809 "lignin biosynthetic process" evidence=IEP

GO:0006865 "amino acid transport" evidence=RCA

GO:0009407 "toxin catabolic process" evidence=RCA

GO:0010583 "response to cyclopentenone" evidence=RCA

TAIR|locus:2005527 ELI3-1 "elicitor-activated gene 3-1" [Arabidopsis thaliana (taxid:3702)]

 Score = 1302 (463.4 bits), Expect = 7.9e-133, P = 7.9e-133
 Identities = 248/351 (70%), Positives = 283/351 (80%)

Query:    11 KNAFGWAAKDTSGVLSPFHFSRRATGEKDVTFKVTHCGICHSDLHMIKNEWGNTIYPIVP 70
             K AFG AAKD SG+LSPF FSRRATGEKDV FKV  CGICH+DL M KNEWG T YP+VP
Sbjct:     7 KEAFGLAAKDESGILSPFSFSRRATGEKDVRFKVLFCGICHTDLSMAKNEWGLTTYPLVP 66

Query:    71 GHEIVGVVTEVGSKVSKFKVGDKVGVGCMVGSCRSCDSCAIDLENYCPKVIMTYANKYHD 130
             GHEIVGVVTEVG+KV KF  GDKVGVG M GSCRSCDSC    ENYCPK+I+T   K  D
Sbjct:    67 GHEIVGVVTEVGAKVKKFNAGDKVGVGYMAGSCRSCDSCNDGDENYCPKMILTSGAKNFD 126

Query:   131 GTITYGGYSDIMVADEHFVVRIPEGTPLDATAPLLCAGITVYSPLRFYGLDKPGMXXXXX 190
              T+T+GGYSD MV  E F++RIP+  PLD  APLLCAG+TVYSP++++GLDKPGM     
Sbjct:   127 DTMTHGGYSDHMVCAEDFIIRIPDNLPLDGAAPLLCAGVTVYSPMKYHGLDKPGMHIGVV 186

Query:   191 XXXXXXXXXXKFAKAMGVKVTVISTSPSKKSEAIERLGADSFLVSRDQDEMQAAMGTMDG 250
                       KFAKAMG KVTVISTS  K+ EA+ RLGAD+FLVSRD  +M+ AMGTMDG
Sbjct:   187 GLGGLGHVAVKFAKAMGTKVTVISTSERKRDEAVTRLGADAFLVSRDPKQMKDAMGTMDG 246

Query:   251 IIDTVSAVHPLMPLIGLLKSQGKLVLVGAPEKPLELPAFSLLMGRKIVGGSMIGGMKETQ 310
             IIDTVSA HPL+PL+GLLK++GKLV+VGAP +PLELP F L+ GRK+V GSM+GG+KETQ
Sbjct:   247 IIDTVSATHPLLPLLGLLKNKGKLVMVGAPAEPLELPVFPLIFGRKMVVGSMVGGIKETQ 306

Query:   311 EMIDFAAKHNIRADIEVIPADYVNTALERLAKADVRYRFVIDVANTMKSTP 361
             EM+D A KHNI ADIE+I ADYVNTA+ERLAKADV+YRFVIDVANTMK TP
Sbjct:   307 EMVDLAGKHNITADIELISADYVNTAMERLAKADVKYRFVIDVANTMKPTP 357

GO:0000166 "nucleotide binding" evidence=IEA

GO:0005737 "cytoplasm" evidence=ISM

GO:0008270 "zinc ion binding" evidence=IEA

GO:0016491 "oxidoreductase activity" evidence=IEA

GO:0016747 "transferase activity, transferring acyl groups other than amino-acyl groups" evidence=IEA

GO:0055114 "oxidation-reduction process" evidence=IEA

GO:0009617 "response to bacterium" evidence=IEP

GO:0009626 "plant-type hypersensitive response" evidence=IGI

GO:0045551 "cinnamyl-alcohol dehydrogenase activity" evidence=IDA

GO:0009809 "lignin biosynthetic process" evidence=IEP

TAIR|locus:2136278 CAD9 "cinnamyl alcohol dehydrogenase 9" [Arabidopsis thaliana (taxid:3702)]

 Score = 1201 (427.8 bits), Expect = 4.0e-122, P = 4.0e-122
 Identities = 224/361 (62%), Positives = 274/361 (75%)

Query:     1 MGQAPEQEHPKNAFGWAAKDTSGVLSPFHFSRRATGEKDVTFKVTHCGICHSDLHMIKNE 60
             M ++PE EHP   FGW A+D SGVLSPFHFSRR  GE DVT K+  CG+CH+DLH IKN+
Sbjct:     1 MAKSPETEHPNKVFGWGARDKSGVLSPFHFSRRDNGENDVTVKILFCGVCHTDLHTIKND 60

Query:    61 WGNTIYPIVPGHEIVGVVTEVGSKVSKFKVGDKVGVGCMVGSCRSCDSCAIDLENYCPKV 120
             WG + YP+VPGHEIVG+ T+VG  V+KFK GD+VGVG + GSC+SC+SC  DLENYCP++
Sbjct:    61 WGYSYYPVVPGHEIVGIATKVGKNVTKFKEGDRVGVGVISGSCQSCESCDQDLENYCPQM 120

Query:   121 IMTYANKYHDGTITYGGYSDIMVADEHFVVRIPEGTPLDATAPLLCAGITVYSPLRFYGL 180
               TY     DGT  YGGYS+ +V D+ FV+R PE  P D+ APLLCAGITVYSP+++YG+
Sbjct:   121 SFTYNAIGSDGTKNYGGYSENIVVDQRFVLRFPENLPSDSGAPLLCAGITVYSPMKYYGM 180

Query:   181 DKPGMXXXXXXXXXXXXXXXKFAKAMGVKVTVISTSPSKKSEAIERLGADSFLVSRDQDE 240
              + G                K  KA G+KVTVIS+S +K  EAI  LGADSFLV+ D  +
Sbjct:   181 TEAGKHLGVAGLGGLGHVAVKIGKAFGLKVTVISSSSTKAEEAINHLGADSFLVTTDPQK 240

Query:   241 MQAAMGTMDGIIDTVSAVHPLMPLIGLLKSQGKLVLVGAPEKPLELPAFSLLMGRKIVGG 300
             M+AA+GTMD IIDT+SAVH L PL+GLLK  GKL+ +G PEKPLELP F L++GRK+VGG
Sbjct:   241 MKAAIGTMDYIIDTISAVHALYPLLGLLKVNGKLIALGLPEKPLELPMFPLVLGRKMVGG 300

Query:   301 SMIGGMKETQEMIDFAAKHNIRADIEVIPADYVNTALERLAKADVRYRFVIDVANTMKST 360
             S +GGMKETQEM+DF AKHNI ADIE+I  D +NTA+ERLAK+DVRYRFVIDVAN++ S 
Sbjct:   301 SDVGGMKETQEMLDFCAKHNITADIELIKMDEINTAMERLAKSDVRYRFVIDVANSL-SP 359

Query:   361 P 361
             P
Sbjct:   360 P 360

GO:0000166 "nucleotide binding" evidence=IEA

GO:0005737 "cytoplasm" evidence=ISM

GO:0008270 "zinc ion binding" evidence=IEA

GO:0016491 "oxidoreductase activity" evidence=IEA

GO:0016747 "transferase activity, transferring acyl groups other than amino-acyl groups" evidence=IEA

GO:0055114 "oxidation-reduction process" evidence=IEA

GO:0009809 "lignin biosynthetic process" evidence=IMP

GO:0045551 "cinnamyl-alcohol dehydrogenase activity" evidence=IMP

GO:0048046 "apoplast" evidence=IDA

TAIR|locus:2120968 CAD6 "cinnamyl alcohol dehydrogenase 6" [Arabidopsis thaliana (taxid:3702)]

 Score = 1199 (427.1 bits), Expect = 6.5e-122, P = 6.5e-122
 Identities = 221/355 (62%), Positives = 278/355 (78%)

Query:     6 EQEHPKNAFGWAAKDTSGVLSPFHFSRRATGEKDVTFKVTHCGICHSDLHMIKNEWGNTI 65
             E+E    AFGWAA+D+SG LSPF FSRR TGE++V  KV +CGICHSDLH +KNEW ++I
Sbjct:     7 EKEQSVEAFGWAARDSSGHLSPFVFSRRKTGEEEVRVKVLYCGICHSDLHCLKNEWHSSI 66

Query:    66 YPIVPGHEIVGVVTEVGSKVSKFKVGDKVGVGCMVGSCRSCDSCAIDLENYCPKVIMTYA 125
             YP+VPGHEI+G V+E+G+KVSKF +GDKVGVGC+V SCR+C+SC  D ENYC K I TY 
Sbjct:    67 YPLVPGHEIIGEVSEIGNKVSKFNLGDKVGVGCIVDSCRTCESCREDQENYCTKAIATYN 126

Query:   126 NKYHDGTITYGGYSDIMVADEHFVVRIPEGTPLDATAPLLCAGITVYSPLRFYGLDKPGM 185
               +HDGTI YGGYSD +V DE + V+IP   PL + APLLCAGI++YSP++++GL  P  
Sbjct:   127 GVHHDGTINYGGYSDHIVVDERYAVKIPHTLPLVSAAPLLCAGISMYSPMKYFGLTGPDK 186

Query:   186 XXXXXXXXXXXXXXXKFAKAMGVKVTVISTSPSKKSEAIERLGADSFLVSRDQDEMQAAM 245
                            +FAKA G KVTV+S++  K  +A++ LGAD FLVS D+D+M+AAM
Sbjct:   187 HVGIVGLGGLGHIGVRFAKAFGTKVTVVSSTTGKSKDALDTLGADGFLVSTDEDQMKAAM 246

Query:   246 GTMDGIIDTVSAVHPLMPLIGLLKSQGKLVLVGAPEKPLELPAFSLLMGRKIVGGSMIGG 305
             GTMDGIIDTVSA H + PLIGLLKS GKLVL+GA EKP ++ AFSL++GRK + GS IGG
Sbjct:   247 GTMDGIIDTVSASHSISPLIGLLKSNGKLVLLGATEKPFDISAFSLILGRKSIAGSGIGG 306

Query:   306 MKETQEMIDFAAKHNIRADIEVIPADYVNTALERLAKADVRYRFVIDVANTMKST 360
             M+ETQEMIDFAA+H I+A+IE+I  DYVNTA++RLAK DVRYRFVID++NT+ +T
Sbjct:   307 MQETQEMIDFAAEHGIKAEIEIISMDYVNTAMDRLAKGDVRYRFVIDISNTLAAT 361

GO:0000166 "nucleotide binding" evidence=IEA

GO:0005737 "cytoplasm" evidence=ISM

GO:0008270 "zinc ion binding" evidence=IEA

GO:0016491 "oxidoreductase activity" evidence=IEA

GO:0055114 "oxidation-reduction process" evidence=IEA

GO:0009809 "lignin biosynthetic process" evidence=IEP

TAIR|locus:2052516 CAD2 "cinnamyl alcohol dehydrogenase homolog 2" [Arabidopsis thaliana (taxid:3702)]

 Score = 1146 (408.5 bits), Expect = 2.7e-116, P = 2.7e-116
 Identities = 216/347 (62%), Positives = 265/347 (76%)

Query:    13 AFGWAAKDTSGVLSPFHFSRRATGEKDVTFKVTHCGICHSDLHMIKNEWGNTIYPIVPGH 72
             AFGWAA D SGVLSPFHFSRR  GE DVT K+  CG+CHSDLH IKN WG + YPI+PGH
Sbjct:     7 AFGWAANDESGVLSPFHFSRRENGENDVTVKILFCGVCHSDLHTIKNHWGFSRYPIIPGH 66

Query:    73 EIVGVVTEVGSKVSKFKVGDKVGVGCMVGSCRSCDSCAIDLENYCPKVIMTYANKYHDGT 132
             EIVG+ T+VG  V+KFK GD+VGVG ++GSC+SC+SC  DLENYCPKV+ TY ++  DGT
Sbjct:    67 EIVGIATKVGKNVTKFKEGDRVGVGVIIGSCQSCESCNQDLENYCPKVVFTYNSRSSDGT 126

Query:   133 I-TYGGYSDIMVADEHFVVRIPEGTPLDATAPLLCAGITVYSPLRFYGLDKP-GMXXXXX 190
                 GGYSD++V D  FV+ IP+G P D+ APLLCAGITVYSP+++YG+ K  G      
Sbjct:   127 SRNQGGYSDVIVVDHRFVLSIPDGLPSDSGAPLLCAGITVYSPMKYYGMTKESGKRLGVN 186

Query:   191 XXXXXXXXXXKFAKAMGVKVTVISTSPSKKSEAIERLGADSFLVSRDQDEMQAAMGTMDG 250
                       K  KA G++VTVIS S  K+ EAI+RLGADSFLV+ D  +M+ A+GTMD 
Sbjct:   187 GLGGLGHIAVKIGKAFGLRVTVISRSSEKEREAIDRLGADSFLVTTDSQKMKEAVGTMDF 246

Query:   251 IIDTVSAVHPLMPLIGLLKSQGKLVLVGAPEKPLELPAFSLLMGRKIVGGSMIGGMKETQ 310
             IIDTVSA H L+PL  LLK  GKLV +G PEKPL+LP FSL++GRK+VGGS IGGMKETQ
Sbjct:   247 IIDTVSAEHALLPLFSLLKVNGKLVALGLPEKPLDLPIFSLVLGRKMVGGSQIGGMKETQ 306

Query:   311 EMIDFAAKHNIRADIEVIPADYVNTALERLAKADVRYRFVIDVANTM 357
             EM++F AKH I +DIE+I    +N+A++RLAK+DVRYRFVIDVAN++
Sbjct:   307 EMLEFCAKHKIVSDIELIKMSDINSAMDRLAKSDVRYRFVIDVANSL 353

GO:0000166 "nucleotide binding" evidence=IEA

GO:0005737 "cytoplasm" evidence=ISM

GO:0008270 "zinc ion binding" evidence=IEA

GO:0016491 "oxidoreductase activity" evidence=IEA

GO:0055114 "oxidation-reduction process" evidence=IEA

GO:0009809 "lignin biosynthetic process" evidence=IC

GO:0045551 "cinnamyl-alcohol dehydrogenase activity" evidence=IDA

TAIR|locus:2052494 CAD3 "cinnamyl alcohol dehydrogenase homolog 3" [Arabidopsis thaliana (taxid:3702)]

 Score = 1135 (404.6 bits), Expect = 3.9e-115, P = 3.9e-115
 Identities = 213/346 (61%), Positives = 262/346 (75%)

Query:    13 AFGWAAKDTSGVLSPFHFSRRATGEKDVTFKVTHCGICHSDLHMIKNEWGNTIYPIVPGH 72
             AFGWAA D SGVLSPFHFSRR  GE DVT K+  CG+CHSDLH IKN WG + YPI+PGH
Sbjct:     7 AFGWAANDESGVLSPFHFSRRENGENDVTVKILFCGVCHSDLHTIKNHWGFSRYPIIPGH 66

Query:    73 EIVGVVTEVGSKVSKFKVGDKVGVGCMVGSCRSCDSCAIDLENYCPKVIMTYANKYHDGT 132
             EIVG+ T+VG  V+KFK GD+VGVG ++GSC+SC+SC  DLENYCPKV+ TY ++  DGT
Sbjct:    67 EIVGIATKVGKNVTKFKEGDRVGVGVIIGSCQSCESCNQDLENYCPKVVFTYNSRSSDGT 126

Query:   133 ITYGGYSDIMVADEHFVVRIPEGTPLDATAPLLCAGITVYSPLRFYGLDKP-GMXXXXXX 191
                GGYSD++V D  FV+ IP+G P D+ APLLCAGITVYSP+++YG+ K  G       
Sbjct:   127 RNQGGYSDVIVVDHRFVLSIPDGLPSDSGAPLLCAGITVYSPMKYYGMTKESGKRLGVNG 186

Query:   192 XXXXXXXXXKFAKAMGVKVTVISTSPSKKSEAIERLGADSFLVSRDQDEMQAAMGTMDGI 251
                      K  KA G++VTVIS S  K+ EAI+RLGADSFLV+ D  +M+ A+GTMD I
Sbjct:   187 LGGLGHIAVKIGKAFGLRVTVISRSSEKEREAIDRLGADSFLVTTDSQKMKEAVGTMDFI 246

Query:   252 IDTVSAVHPLMPLIGLLKSQGKLVLVGAPEKPLELPAFSLLMGRKIVGGSMIGGMKETQE 311
             IDTVSA H L+PL  LLK  GKLV +G  EKPL+LP F L++GRK+VGGS IGGMKETQE
Sbjct:   247 IDTVSAEHALLPLFSLLKVSGKLVALGLLEKPLDLPIFPLVLGRKMVGGSQIGGMKETQE 306

Query:   312 MIDFAAKHNIRADIEVIPADYVNTALERLAKADVRYRFVIDVANTM 357
             M++F AKH I +DIE+I    +N+A++RL K+DVRYRFVIDVAN++
Sbjct:   307 MLEFCAKHKIVSDIELIKMSDINSAMDRLVKSDVRYRFVIDVANSL 352

GO:0000166 "nucleotide binding" evidence=IEA

GO:0005737 "cytoplasm" evidence=ISM

GO:0008270 "zinc ion binding" evidence=IEA

GO:0016491 "oxidoreductase activity" evidence=IEA

GO:0055114 "oxidation-reduction process" evidence=IEA

GO:0009809 "lignin biosynthetic process" evidence=IC

GO:0045551 "cinnamyl-alcohol dehydrogenase activity" evidence=IDA

UNIPROTKB|Q0JA75 CAD7 "Cinnamyl alcohol dehydrogenase 7" [Oryza sativa Japonica Group (taxid:39947)]

 Score = 1065 (380.0 bits), Expect = 1.0e-107, P = 1.0e-107
 Identities = 207/366 (56%), Positives = 258/366 (70%)

Query:     3 QAPEQEHPKNAFGWAAKDTSGVLSPFHFSRRATGEKDVTFKVTHCGICHSDLHMIKNEWG 62
             QAP  +H + A G AA D SG L+P   SRR TG+ DV  KV +CGICHSDLH IKNEW 
Sbjct:    13 QAPPPQHTRKAVGLAAHDDSGHLTPIRISRRKTGDDDVAIKVLYCGICHSDLHTIKNEWR 72

Query:    63 NTIYPIVPGHEIVGVVTEVGSKVSKFKVGDKVGVGCMVGSCRSCDSCAIDLENYCPK-VI 121
             N +YP+V GHEI GVVTEVG  V++FK GD+VGVGCMV +C  C+SC    ENYC   V+
Sbjct:    73 NAVYPVVAGHEITGVVTEVGKNVARFKAGDEVGVGCMVNTCGGCESCRDGCENYCSGGVV 132

Query:   122 MTYANKYHDGTITYGGYSDIMVADEHFVVRIPEGT--------PLDATAPLLCAGITVYS 173
              TY +   DGT TYGGYSD +V  + FVVR P           PLD+ APLLCAG+TVY+
Sbjct:   133 FTYNSVDRDGTRTYGGYSDAVVVSQRFVVRFPSSAGGGAGAALPLDSGAPLLCAGVTVYA 192

Query:   174 PLRFYGLDKPGMXXXXXXXXXXXXXXXKFAKAMGVKVTVISTSPSKKSEAIERLGADSFL 233
             P+R +GL + G                KFA+A G++VTVISTSP K+ EA+ERLGAD F+
Sbjct:   193 PMRQHGLCEAGKHVGVVGLGGLGHVAVKFARAFGMRVTVISTSPVKRQEALERLGADGFI 252

Query:   234 VSRDQDEMQAAMGTMDGIIDTVSAVHPLMPLIGLLKSQGKLVLVGAPEKPLELPAFSLLM 293
             VS +  EM+AAMGTM GII+T SA   +   + LLK +GK++LVG PEKPL++P F+L+ 
Sbjct:   253 VSTNASEMKAAMGTMHGIINTASASTSMHSYLALLKPKGKMILVGLPEKPLQIPTFALVG 312

Query:   294 GRKIVGGSMIGGMKETQEMIDFAAKHNIRADIEVIPADYVNTALERLAKADVRYRFVIDV 353
             G KI+ GS +G + ETQEMIDFAA+H + ADIE+I AD VNTA+ERLAK DVRYRFV+D+
Sbjct:   313 GGKILAGSCMGSISETQEMIDFAAEHGVAADIELIGADEVNTAMERLAKGDVRYRFVVDI 372

Query:   354 ANTMKS 359
              NT++S
Sbjct:   373 GNTLRS 378

GO:0009809 "lignin biosynthetic process" evidence=IMP

GO:0045551 "cinnamyl-alcohol dehydrogenase activity" evidence=IMP

TAIR|locus:2090704 ATCAD4 [Arabidopsis thaliana (taxid:3702)]

 Score = 911 (325.7 bits), Expect = 2.1e-91, P = 2.1e-91
 Identities = 181/356 (50%), Positives = 233/356 (65%)

Query:     1 MGQAPEQEHPKNAFGWAAKDTSGVLSPFHFSRRATGEKDVTFKVTHCGICHSDLHMIKNE 60
             MG     E  K A GWAA+D SGVLSP+ ++ R+TG  DV  KV  CGICH+D+H IKN+
Sbjct:     1 MGSVEAGE--KKALGWAARDPSGVLSPYSYTLRSTGADDVYIKVICCGICHTDIHQIKND 58

Query:    61 WGNTIYPIVPGHEIVGVVTEVGSKVSKFKVGDKVGVGCMVGSCRSCDSCAIDLENYCPKV 120
              G + YP+VPGHE+VG V EVGS VSKF VGD VGVG +VG C SC  C+ +LE YC K 
Sbjct:    59 LGMSNYPMVPGHEVVGEVLEVGSDVSKFTVGDVVGVGVVVGCCGSCKPCSSELEQYCNKR 118

Query:   121 IMTYANKYHDGTITYGGYSDIMVADEHFVVRIPEGTPLDATAPLLCAGITVYSPLRFYGL 180
             I +Y + Y DG  T GG++D M+ ++ FVV+IPEG  ++  APLLCAG+TVYSPL  +GL
Sbjct:   119 IWSYNDVYTDGKPTQGGFADTMIVNQKFVVKIPEGMAVEQAAPLLCAGVTVYSPLSHFGL 178

Query:   181 DKPGMXXXXXXXXXXXXXXXKFAKAMGVKVTVISTSPSKKSEAIERLGADSFLVSRDQDE 240
                G+               K AKAMG  VTVIS+S  KK EAIE LGAD ++VS D  E
Sbjct:   179 MASGLKGGILGLGGVGHMGVKIAKAMGHHVTVISSSDKKKEEAIEHLGADDYVVSSDPAE 238

Query:   241 MQAAMGTMDGIIDTVSAVHPLMPLIGLLKSQGKLVLVGAPEKPLELPAFSLLMGRKIVGG 300
             MQ    ++D IIDTV   HPL P +  LK  GKL+L+G    PL+     +++GRK++ G
Sbjct:   239 MQRLADSLDYIIDTVPVFHPLDPYLACLKLDGKLILMGVINTPLQFVTPLVILGRKVISG 298

Query:   301 SMIGGMKETQEMIDFAAKHNIRADIEVIPADYVNTALERLAKADVRYRFVIDVANT 356
             S IG +KET+E++ F  +  + + IE +  D +N A ERL K DVRYRFV+DVA +
Sbjct:   299 SFIGSIKETEEVLAFCKEKGLTSTIETVKIDELNIAFERLRKNDVRYRFVVDVAGS 354

GO:0000166 "nucleotide binding" evidence=IEA

GO:0005737 "cytoplasm" evidence=ISM

GO:0008270 "zinc ion binding" evidence=IEA

GO:0016491 "oxidoreductase activity" evidence=IEA

GO:0055114 "oxidation-reduction process" evidence=IEA

GO:0045551 "cinnamyl-alcohol dehydrogenase activity" evidence=IDA;IMP

GO:0009809 "lignin biosynthetic process" evidence=IGI;TAS

GO:0080167 "response to karrikin" evidence=IEP

TAIR|locus:2124311 CAD5 "cinnamyl alcohol dehydrogenase 5" [Arabidopsis thaliana (taxid:3702)]

 Score = 911 (325.7 bits), Expect = 2.1e-91, P = 2.1e-91
 Identities = 174/346 (50%), Positives = 229/346 (66%)

Query:     8 EHPKNAFGWAAKDTSGVLSPFHFSRRATGEKDVTFKVTHCGICHSDLHMIKNEWGNTIYP 67
             E  +   GWAA+D SG+LSP+ ++ R TG +DV  ++  CGICH+DLH  KN+ G + YP
Sbjct:     5 EAERKTTGWAARDPSGILSPYTYTLRETGPEDVNIRIICCGICHTDLHQTKNDLGMSNYP 64

Query:    68 IVPGHEIVGVVTEVGSKVSKFKVGDKVGVGCMVGSCRSCDSCAIDLENYCPKVIMTYANK 127
             +VPGHE+VG V EVGS VSKF VGD VGVGC+VG C  C  C  DLE YCPK I +Y + 
Sbjct:    65 MVPGHEVVGEVVEVGSDVSKFTVGDIVGVGCLVGCCGGCSPCERDLEQYCPKKIWSYNDV 124

Query:   128 YHDGTITYGGYSDIMVADEHFVVRIPEGTPLDATAPLLCAGITVYSPLRFYGLDKPGMXX 187
             Y +G  T GG++   V  + FVV+IPEG  ++  APLLCAG+TVYSPL  +GL +PG+  
Sbjct:   125 YINGQPTQGGFAKATVVHQKFVVKIPEGMAVEQAAPLLCAGVTVYSPLSHFGLKQPGLRG 184

Query:   188 XXXXXXXXXXXXXKFAKAMGVKVTVISTSPSKKSEAIERLGADSFLVSRDQDEMQAAMGT 247
                          K AKAMG  VTVIS+S  K+ EA++ LGAD +++  DQ +M     +
Sbjct:   185 GILGLGGVGHMGVKIAKAMGHHVTVISSSNKKREEALQDLGADDYVIGSDQAKMSELADS 244

Query:   248 MDGIIDTVSAVHPLMPLIGLLKSQGKLVLVGAPEKPLELPAFSLLMGRKIVGGSMIGGMK 307
             +D +IDTV   H L P + LLK  GKL+L+G    PL+     L++GRK++ GS IG MK
Sbjct:   245 LDYVIDTVPVHHALEPYLSLLKLDGKLILMGVINNPLQFLTPLLMLGRKVITGSFIGSMK 304

Query:   308 ETQEMIDFAAKHNIRADIEVIPADYVNTALERLAKADVRYRFVIDV 353
             ET+EM++F  +  + + IEV+  DYVNTA ERL K DVRYRFV+DV
Sbjct:   305 ETEEMLEFCKEKGLSSIIEVVKMDYVNTAFERLEKNDVRYRFVVDV 350

GO:0000166 "nucleotide binding" evidence=IEA

GO:0005737 "cytoplasm" evidence=ISM

GO:0008270 "zinc ion binding" evidence=IEA

GO:0016491 "oxidoreductase activity" evidence=IEA

GO:0016747 "transferase activity, transferring acyl groups other than amino-acyl groups" evidence=IEA

GO:0055114 "oxidation-reduction process" evidence=IEA

GO:0045551 "cinnamyl-alcohol dehydrogenase activity" evidence=IDA;IMP

GO:0009809 "lignin biosynthetic process" evidence=IGI;IMP;TAS

GO:0005829 "cytosol" evidence=IDA

GO:0006612 "protein targeting to membrane" evidence=RCA

GO:0006865 "amino acid transport" evidence=RCA

GO:0009611 "response to wounding" evidence=RCA

GO:0009805 "coumarin biosynthetic process" evidence=RCA

GO:0009963 "positive regulation of flavonoid biosynthetic process" evidence=RCA

GO:0010363 "regulation of plant-type hypersensitive response" evidence=RCA

GO:0015824 "proline transport" evidence=RCA

UNIPROTKB|Q6ZHS4 CAD2 "Cinnamyl alcohol dehydrogenase 2" [Oryza sativa Japonica Group (taxid:39947)]

 Score = 885 (316.6 bits), Expect = 1.2e-88, P = 1.2e-88
 Identities = 171/346 (49%), Positives = 229/346 (66%)

Query:    11 KNAFGWAAKDTSGVLSPFHFSRRATGEKDVTFKVTHCGICHSDLHMIKNEWGNTIYPIVP 70
             K   GWAA+D SG L+P++++ R TG +DV  KV +CGICH+D+H  KN  G + YP+VP
Sbjct:     8 KTVTGWAARDASGHLTPYNYTLRKTGPEDVVVKVLYCGICHTDIHQAKNHLGASKYPMVP 67

Query:    71 GHEIVGVVTEVGSKVSKFKVGDKVGVGCMVGSCRSCDSCAIDLENYCPKVIMTYANKYHD 130
             GHE+VG V EVG +V+K+  GD VGVG +VG CR C  C  ++E YC K I +Y + Y D
Sbjct:    68 GHEVVGEVVEVGPEVTKYSAGDVVGVGVIVGCCRECHPCKANVEQYCNKRIWSYNDVYTD 127

Query:   131 GTITYGGYSDIMVADEHFVVRIPEGTPLDATAPLLCAGITVYSPLRFYGLDKPGMXXXXX 190
             G  T GG++  MV D+ FVV+IP G   +  APLLCAG+TVYSPL+ +GL  PG+     
Sbjct:   128 GRPTQGGFASAMVVDQKFVVKIPAGLAPEQAAPLLCAGLTVYSPLKHFGLMSPGLRGGVL 187

Query:   191 XXXXXXXXXXKFAKAMGVKVTVISTSPSKKSEAIERLGADSFLVSRDQDEMQAAMGTMDG 250
                       K AK+MG  VTVIS+S  K+ EA++ LGAD++LVS D   M AA  ++D 
Sbjct:   188 GLGGVGHMGVKVAKSMGHHVTVISSSARKRGEAMDDLGADAYLVSSDAAAMAAAGDSLDY 247

Query:   251 IIDTVSAVHPLMPLIGLLKSQGKLVLVGAPEKPLELPAFSLLMGRKIVGGSMIGGMKETQ 310
             IIDTV   HPL P + LLK  GKL+L+G   +PL   +  +++GRK + GS IG M ET+
Sbjct:   248 IIDTVPVHHPLEPYLALLKLDGKLILMGVINQPLSFISPMVMLGRKAITGSFIGSMAETE 307

Query:   311 EMIDFAAKHNIRADIEVIPADYVNTALERLAKADVRYRFVIDVANT 356
             E+++F     + + IEV+  DYVN ALERL + DVRYRFV+DVA +
Sbjct:   308 EVLNFCVDKGLTSQIEVVKMDYVNQALERLERNDVRYRFVVDVAGS 353

GO:0009809 "lignin biosynthetic process" evidence=IDA

GO:0045551 "cinnamyl-alcohol dehydrogenase activity" evidence=IDA

---

Prediction of Enzyme Commission (EC) Number

EC Number Prediction by Annotation Transfer from SWISS-PROT Entries

Original result of BLAST against SWISS-PROT

ID	Name	Annotated EC number	Identity	Query coverage	Hit coverage	RBH(Q2H)	RBH(H2Q)
P0A4X1	ADHC_MYCBO	1, ., 1, ., 1, ., 2	0.4882	0.9335	0.9739	yes	no
P0A4X0	ADHC_MYCTU	1, ., 1, ., 1, ., 2	0.4882	0.9335	0.9739	yes	no
P42754	MTDH_PETCR	1, ., 1, ., 1, ., 2, 5, 5	0.75	0.9307	0.9970	N/A	no
C0SPA5	ADHA_BACSU	1, ., 1, ., 1, ., -	0.5107	0.8919	0.9226	yes	no
P42495	CADH1_ARACO	1, ., 1, ., 1, ., 1, 9, 5	0.5457	0.9667	0.9694	N/A	no
P30360	CADH2_TOBAC	1, ., 1, ., 1, ., 1, 9, 5	0.5433	0.9584	0.9691	N/A	no
O82035	CADH2_PICAB	1, ., 1, ., 1, ., 1, 9, 5	0.5501	0.9667	0.9775	N/A	no
Q42726	CADH1_EUCGU	1, ., 1, ., 1, ., 1, 9, 5	0.5243	0.9612	0.9802	N/A	no
P93257	MTDH_MESCR	1, ., 1, ., 1, ., 2, 5, 5	0.7668	0.9861	0.9861	N/A	no
Q08350	CADH7_PICAB	1, ., 1, ., 1, ., 1, 9, 5	0.5504	0.9612	0.9719	N/A	no
P31657	CADH_POPDE	1, ., 1, ., 1, ., 1, 9, 5	0.5358	0.9667	0.9775	N/A	no
P31656	CADH_MEDSA	1, ., 1, ., 1, ., 1, 9, 5	0.5202	0.9584	0.9664	N/A	no
P31655	CADH2_EUCGU	1, ., 1, ., 1, ., 1, 9, 5	0.5329	0.9667	0.9803	N/A	no
P0CH37	ADHC2_MYCS2	1, ., 1, ., 1, ., 2	0.5467	0.9362	0.9684	yes	no
P30359	CADH1_TOBAC	1, ., 1, ., 1, ., 1, 9, 5	0.5520	0.9584	0.9691	N/A	no
Q337Y2	CADH3_ORYSJ	1, ., 1, ., 1, ., 1, 9, 5	0.6504	0.9667	0.9535	yes	no
Q43138	MTDH3_STYHU	1, ., 1, ., 1, ., 2, 5, 5	0.6918	0.9806	0.9752	N/A	no
O64969	CADH_EUCGL	1, ., 1, ., 1, ., 1, 9, 5	0.5358	0.9667	0.9803	N/A	no
P50746	CADH_EUCBO	1, ., 1, ., 1, ., 1, 9, 5	0.5300	0.9639	0.9802	N/A	no
Q2KNL5	CADH1_OCIBA	1, ., 1, ., 1, ., 1, 9, 5	0.5300	0.9667	0.9775	N/A	no
Q2KNL6	GEDH1_OCIBA	1, ., 1, ., 1, ., 1, 8, 3	0.7067	0.9916	0.9944	N/A	no
Q43137	MTDH1_STYHU	1, ., 1, ., 1, ., 2, 5, 5	0.6494	0.9612	0.9802	N/A	no
P0CH36	ADHC1_MYCS2	1, ., 1, ., 1, ., 2	0.5467	0.9362	0.9684	yes	no
P41637	CADH_PINTA	1, ., 1, ., 1, ., 1, 9, 5	0.5444	0.9667	0.9775	N/A	no
Q9ZRF1	MTDH_FRAAN	1, ., 1, ., 1, ., 2, 5, 5	0.8084	0.9833	0.9888	N/A	no
O82515	MTDH_MEDSA	1, ., 1, ., 1, ., 2, 5, 5	0.6657	0.9916	0.9972	N/A	no
Q6V4H0	10HGO_CATRO	1, ., 1, ., 1, ., 3, 2, 4	0.7715	0.9944	0.9972	N/A	no
Q40976	CADH_PINRA	1, ., 1, ., 1, ., 1, 9, 5	0.5415	0.9667	0.9775	N/A	no
O22380	CADH_LOLPR	1, ., 1, ., 1, ., 1, 9, 5	0.5196	0.9806	0.9806	N/A	no
Q38707	MTDH_APIGR	1, ., 1, ., 1, ., 2, 5, 5	0.6991	0.9944	0.9835	N/A	no
Q02972	CADH8_ARATH	1, ., 1, ., 1, ., 1, 9, 5	0.7549	0.9722	0.9777	yes	no
Q02971	CADH7_ARATH	1, ., 1, ., 1, ., 1, 9, 5	0.7340	0.9889	1.0	no	no

EC Number Prediction by Ezypred Server

Original result from Ezypred Server

Fail to connect to Ezypred Server

EC Number Prediction by EFICAz Software

Prediction Level	EC number	Confidence of Prediction
3rd Layer	1.1.1	0.983
4th Layer	1.1.1.195	LOW CONFIDENCE prediction!

---

Prediction of Functionally Associated Proteins

Functionally Associated Proteins Detected by STRING

Original result from the STRING server

Fail to connect to STRING server

---

Conserved Domains and Related Protein Families

Conserved Domains Detected by RPS-BLAST

Original result of RPS-BLAST against CDD database part I

ID	Length	Definition	E-value
Query	361
PLN02586	360	PLN02586, PLN02586, probable cinnamyl alcohol dehy	0.0
cd05283	337	cd05283, CAD1, Cinnamyl alcohol dehydrogenases (CA	0.0
PLN02178	375	PLN02178, PLN02178, cinnamyl-alcohol dehydrogenase	1e-175
PLN02514	357	PLN02514, PLN02514, cinnamyl-alcohol dehydrogenase	1e-161
cd08245	330	cd08245, CAD, Cinnamyl alcohol dehydrogenases (CAD	1e-146
COG1064	339	COG1064, AdhP, Zn-dependent alcohol dehydrogenases	1e-126
cd08296	333	cd08296, CAD_like, Cinnamyl alcohol dehydrogenases	1e-82
cd08297	341	cd08297, CAD3, Cinnamyl alcohol dehydrogenases (CA	3e-80
cd08298	329	cd08298, CAD2, Cinnamyl alcohol dehydrogenases (CA	6e-70
cd05284	340	cd05284, arabinose_DH_like, D-arabinose dehydrogen	3e-59
cd08240	350	cd08240, 6_hydroxyhexanoate_dh_like, 6-hydroxyhexa	3e-55
cd05188	271	cd05188, MDR, Medium chain reductase/dehydrogenase	1e-54
cd08254	338	cd08254, hydroxyacyl_CoA_DH, 6-hydroxycyclohex-1-e	9e-53
cd08259	332	cd08259, Zn_ADH5, Alcohol dehydrogenases of the MD	7e-46
COG1063	350	COG1063, Tdh, Threonine dehydrogenase and related	4e-39
cd08279	363	cd08279, Zn_ADH_class_III, Class III alcohol dehyd	3e-38
COG1062	366	COG1062, AdhC, Zn-dependent alcohol dehydrogenases	3e-37
PRK09422	338	PRK09422, PRK09422, ethanol-active dehydrogenase/a	3e-37
PRK13771	334	PRK13771, PRK13771, putative alcohol dehydrogenase	2e-33
cd08263	367	cd08263, Zn_ADH10, Alcohol dehydrogenases of the M	2e-33
cd08236	343	cd08236, sugar_DH, NAD(P)-dependent sugar dehydrog	4e-33
COG0604	326	COG0604, Qor, NADPH:quinone reductase and related	2e-32
cd05289	309	cd05289, MDR_like_2, alcohol dehydrogenase and qui	3e-32
cd08233	351	cd08233, butanediol_DH_like, (2R,3R)-2,3-butanedio	1e-31
cd08231	361	cd08231, MDR_TM0436_like, Hypothetical enzyme TM04	8e-31
pfam08240	108	pfam08240, ADH_N, Alcohol dehydrogenase GroES-like	1e-30
cd08260	345	cd08260, Zn_ADH6, Alcohol dehydrogenases of the MD	1e-30
TIGR02822	329	TIGR02822, adh_fam_2, zinc-binding alcohol dehydro	9e-30
cd08278	365	cd08278, benzyl_alcohol_DH, Benzyl alcohol dehydro	2e-29
cd08235	343	cd08235, iditol_2_DH_like, L-iditol 2-dehydrogenas	6e-29
cd08258	306	cd08258, Zn_ADH4, Alcohol dehydrogenases of the MD	1e-28
cd08277	365	cd08277, liver_alcohol_DH_like, Liver alcohol dehy	2e-28
cd08234	334	cd08234, threonine_DH_like, L-threonine dehydrogen	5e-28
cd08239	339	cd08239, THR_DH_like, L-threonine dehydrogenase (T	3e-27
TIGR03989	369	TIGR03989, Rxyl_3153, oxidoreductase, Rxyl_3153 fa	1e-25
cd05279	365	cd05279, Zn_ADH1, Liver alcohol dehydrogenase and	3e-25
cd08281	371	cd08281, liver_ADH_like1, Zinc-dependent alcohol d	5e-25
cd08264	325	cd08264, Zn_ADH_like2, Alcohol dehydrogenases of t	1e-24
cd08267	319	cd08267, MDR1, Medium chain dehydrogenases/reducta	6e-23
cd05278	347	cd05278, FDH_like, Formaldehyde dehydrogenases	8e-23
cd08241	323	cd08241, QOR1, Quinone oxidoreductase (QOR)	3e-22
cd08232	339	cd08232, idonate-5-DH, L-idonate 5-dehydrogenase	6e-22
cd08261	337	cd08261, Zn_ADH7, Alcohol dehydrogenases of the MD	1e-21
cd08299	373	cd08299, alcohol_DH_class_I_II_IV, class I, II, IV	3e-21
cd05285	343	cd05285, sorbitol_DH, Sorbitol dehydrogenase	3e-21
cd08301	369	cd08301, alcohol_DH_plants, Plant alcohol dehydrog	7e-21
cd08266	342	cd08266, Zn_ADH_like1, Alcohol dehydrogenases of t	1e-19
cd08286	345	cd08286, FDH_like_ADH2, formaldehyde dehydrogenase	4e-19
cd08276	336	cd08276, MDR7, Medium chain dehydrogenases/reducta	6e-19
cd08284	344	cd08284, FDH_like_2, Glutathione-dependent formald	1e-18
pfam00107	131	pfam00107, ADH_zinc_N, Zinc-binding dehydrogenase	4e-18
PRK10309	347	PRK10309, PRK10309, galactitol-1-phosphate dehydro	7e-18
cd08271	325	cd08271, MDR5, Medium chain dehydrogenases/reducta	1e-17
cd08300	368	cd08300, alcohol_DH_class_III, class III alcohol d	1e-17
PLN02702	364	PLN02702, PLN02702, L-idonate 5-dehydrogenase	2e-17
cd08249	339	cd08249, enoyl_reductase_like, enoyl_reductase_lik	2e-17
cd08283	386	cd08283, FDH_like_1, Glutathione-dependent formald	2e-16
cd08275	337	cd08275, MDR3, Medium chain dehydrogenases/reducta	2e-16
cd08273	331	cd08273, MDR8, Medium chain dehydrogenases/reducta	2e-16
cd08268	328	cd08268, MDR2, Medium chain dehydrogenases/reducta	5e-16
TIGR02818	368	TIGR02818, adh_III_F_hyde, S-(hydroxymethyl)glutat	6e-16
TIGR02824	325	TIGR02824, quinone_pig3, putative NAD(P)H quinone	1e-15
cd08269	312	cd08269, Zn_ADH9, Alcohol dehydrogenases of the MD	2e-15
cd08242	319	cd08242, MDR_like, Medium chain dehydrogenases/red	2e-15
cd08255	277	cd08255, 2-desacetyl-2-hydroxyethyl_bacteriochloro	3e-15
TIGR03451	358	TIGR03451, mycoS_dep_FDH, S-(hydroxymethyl)mycothi	1e-14
cd05281	341	cd05281, TDH, Threonine dehydrogenase	2e-14
cd08262	341	cd08262, Zn_ADH8, Alcohol dehydrogenases of the MD	2e-14
cd05276	323	cd05276, p53_inducible_oxidoreductase, PIG3 p53-in	2e-14
cd05195	293	cd05195, enoyl_red, enoyl reductase of polyketide	2e-14
cd08272	326	cd08272, MDR6, Medium chain dehydrogenases/reducta	2e-14
cd05282	323	cd05282, ETR_like, 2-enoyl thioester reductase-lik	4e-14
cd08285	351	cd08285, NADP_ADH, NADP(H)-dependent alcohol dehyd	4e-14
cd08253	325	cd08253, zeta_crystallin, Zeta-crystallin with NAD	4e-14
PLN02740	381	PLN02740, PLN02740, Alcohol dehydrogenase-like	4e-14
cd08265	384	cd08265, Zn_ADH3, Alcohol dehydrogenases of the MD	8e-14
TIGR03201	349	TIGR03201, dearomat_had, 6-hydroxycyclohex-1-ene-1	1e-13
TIGR00692	340	TIGR00692, tdh, L-threonine 3-dehydrogenase	1e-13
cd08282	375	cd08282, PFDH_like, Pseudomonas putida aldehyde-di	2e-13
cd08287	345	cd08287, FDH_like_ADH3, formaldehyde dehydrogenase	2e-13
cd05286	320	cd05286, QOR2, Quinone oxidoreductase (QOR)	3e-13
PRK05396	341	PRK05396, tdh, L-threonine 3-dehydrogenase; Valida	4e-13
smart00829	287	smart00829, PKS_ER, Enoylreductase	5e-13
cd08230	355	cd08230, glucose_DH, Glucose dehydrogenase	2e-12
TIGR03366	280	TIGR03366, HpnZ_proposed, putative phosphonate cat	6e-12
PRK10083	339	PRK10083, PRK10083, putative oxidoreductase; Provi	1e-11
cd08250	329	cd08250, Mgc45594_like, Mgc45594 gene product and	2e-11
PTZ00354	334	PTZ00354, PTZ00354, alcohol dehydrogenase; Provisi	3e-11
cd08252	336	cd08252, AL_MDR, Arginate lyase and other MDR fami	4e-11
PRK09880	343	PRK09880, PRK09880, L-idonate 5-dehydrogenase; Pro	6e-11
cd08289	326	cd08289, MDR_yhfp_like, Yhfp putative quinone oxid	1e-10
PLN02827	378	PLN02827, PLN02827, Alcohol dehydrogenase-like	1e-10
cd08251	303	cd08251, polyketide_synthase, polyketide synthase	1e-10
cd08243	320	cd08243, quinone_oxidoreductase_like_1, Quinone ox	4e-10
cd08274	350	cd08274, MDR9, Medium chain dehydrogenases/reducta	6e-10
cd08256	350	cd08256, Zn_ADH2, Alcohol dehydrogenases of the MD	2e-09
cd08248	350	cd08248, RTN4I1, Human Reticulon 4 Interacting Pro	2e-09
TIGR01751	398	TIGR01751, crot-CoA-red, crotonyl-CoA reductase	1e-08
cd05280	325	cd05280, MDR_yhdh_yhfp, Yhdh and yhfp-like putativ	1e-08
cd08290	341	cd08290, ETR, 2-enoyl thioester reductase (ETR)	1e-08
TIGR01202	308	TIGR01202, bchC, 2-desacetyl-2-hydroxyethyl bacter	4e-08
TIGR02819	393	TIGR02819, fdhA_non_GSH, formaldehyde dehydrogenas	7e-08
cd08244	324	cd08244, MDR_enoyl_red, Possible enoyl reductase	3e-07
COG2130	340	COG2130, COG2130, Putative NADP-dependent oxidored	3e-07
TIGR02817	336	TIGR02817, adh_fam_1, zinc-binding alcohol dehydro	6e-07
cd08246	393	cd08246, crotonyl_coA_red, crotonyl-CoA reductase	8e-07
PRK10754	327	PRK10754, PRK10754, quinone oxidoreductase, NADPH-	1e-06
TIGR02823	323	TIGR02823, oxido_YhdH, putative quinone oxidoreduc	6e-06
cd08288	324	cd08288, MDR_yhdh, Yhdh putative quinone oxidoredu	9e-06
cd08270	305	cd08270, MDR4, Medium chain dehydrogenases/reducta	3e-05
cd05300	313	cd05300, 2-Hacid_dh_1, Putative D-isomer specific	3e-05
pfam02826	175	pfam02826, 2-Hacid_dh_C, D-isomer specific 2-hydro	5e-05
cd08247	352	cd08247, AST1_like, AST1 is a cytoplasmic protein	8e-05
PRK13243	333	PRK13243, PRK13243, glyoxylate reductase; Reviewed	6e-04
cd05198	302	cd05198, formate_dh_like, Formate/glycerate and re	7e-04
cd12178	317	cd12178, 2-Hacid_dh_13, Putative D-isomer specific	0.001
COG0111	324	COG0111, SerA, Phosphoglycerate dehydrogenase and	0.002

>gnl|CDD|166227 PLN02586, PLN02586, probable cinnamyl alcohol dehydrogenase

 Score =  587 bits (1515), Expect = 0.0
 Identities = 251/357 (70%), Positives = 303/357 (84%)

Query: 1   MGQAPEQEHPKNAFGWAAKDTSGVLSPFHFSRRATGEKDVTFKVTHCGICHSDLHMIKNE 60
           M ++PE+EHP+ AFGWAA+D SGVLSPFHFSRR  G++DVT K+ +CG+CHSDLH IKNE
Sbjct: 1   MAKSPEEEHPQKAFGWAARDPSGVLSPFHFSRRENGDEDVTVKILYCGVCHSDLHTIKNE 60

Query: 61  WGNTIYPIVPGHEIVGVVTEVGSKVSKFKVGDKVGVGCMVGSCRSCDSCAIDLENYCPKV 120
           WG T YPIVPGHEIVG+VT++G  V KFK GD+VGVG +VGSC+SC+SC  DLENYCPK+
Sbjct: 61  WGFTRYPIVPGHEIVGIVTKLGKNVKKFKEGDRVGVGVIVGSCKSCESCDQDLENYCPKM 120

Query: 121 IMTYANKYHDGTITYGGYSDIMVADEHFVVRIPEGTPLDATAPLLCAGITVYSPLRFYGL 180
           I TY +  HDGT  YGGYSD++V D+HFV+R P+  PLDA APLLCAGITVYSP+++YG+
Sbjct: 121 IFTYNSIGHDGTKNYGGYSDMIVVDQHFVLRFPDNLPLDAGAPLLCAGITVYSPMKYYGM 180

Query: 181 DKPGMHVGVVGLGGLGHVAVKFAKAMGVKVTVISTSPSKKSEAIERLGADSFLVSRDQDE 240
            +PG H+GV GLGGLGHVAVK  KA G+KVTVIS+S +K+ EAI RLGADSFLVS D ++
Sbjct: 181 TEPGKHLGVAGLGGLGHVAVKIGKAFGLKVTVISSSSNKEDEAINRLGADSFLVSTDPEK 240

Query: 241 MQAAMGTMDGIIDTVSAVHPLMPLIGLLKSQGKLVLVGAPEKPLELPAFSLLMGRKIVGG 300
           M+AA+GTMD IIDTVSAVH L PL+GLLK  GKL+ +G PEKPLELP F L++GRK+VGG
Sbjct: 241 MKAAIGTMDYIIDTVSAVHALGPLLGLLKVNGKLITLGLPEKPLELPIFPLVLGRKLVGG 300

Query: 301 SMIGGMKETQEMIDFAAKHNIRADIEVIPADYVNTALERLAKADVRYRFVIDVANTM 357
           S IGG+KETQEM+DF AKHNI ADIE+I  D +NTA+ERLAK+DVRYRFVIDVAN++
Sbjct: 301 SDIGGIKETQEMLDFCAKHNITADIELIRMDEINTAMERLAKSDVRYRFVIDVANSL 357

Length = 360

>gnl|CDD|176186 cd05283, CAD1, Cinnamyl alcohol dehydrogenases (CAD)

 Score =  570 bits (1471), Expect = 0.0
 Identities = 212/339 (62%), Positives = 256/339 (75%), Gaps = 2/339 (0%)

Query: 14  FGWAAKDTSGVLSPFHFSRRATGEKDVTFKVTHCGICHSDLHMIKNEWGNTIYPIVPGHE 73
            G+AA+D SG L PF F RR  G  DV  K+T+CG+CHSDLH ++NEWG T YP+VPGHE
Sbjct: 1   KGYAARDASGKLEPFTFERRPLGPDDVDIKITYCGVCHSDLHTLRNEWGPTKYPLVPGHE 60

Query: 74  IVGVVTEVGSKVSKFKVGDKVGVGCMVGSCRSCDSCAIDLENYCPKVIMTYANKYHDGTI 133
           IVG+V  VGSKV+KFKVGD+VGVGC V SC +C+ C    E YCPK ++TY  KY DGTI
Sbjct: 61  IVGIVVAVGSKVTKFKVGDRVGVGCQVDSCGTCEQCKSGEEQYCPKGVVTYNGKYPDGTI 120

Query: 134 TYGGYSDIMVADEHFVVRIPEGTPLDATAPLLCAGITVYSPLRFYGLDKPGMHVGVVGLG 193
           T GGY+D +V DE FV +IPEG    A APLLCAGITVYSPL+  G+  PG  VGVVG+G
Sbjct: 121 TQGGYADHIVVDERFVFKIPEGLDSAAAAPLLCAGITVYSPLKRNGV-GPGKRVGVVGIG 179

Query: 194 GLGHVAVKFAKAMGVKVTVISTSPSKKSEAIERLGADSFLVSRDQDEMQAAMGTMDGIID 253
           GLGH+AVKFAKA+G +VT  S SPSKK +A  +LGAD F+ ++D + M+ A G++D IID
Sbjct: 180 GLGHLAVKFAKALGAEVTAFSRSPSKKEDA-LKLGADEFIATKDPEAMKKAAGSLDLIID 238

Query: 254 TVSAVHPLMPLIGLLKSQGKLVLVGAPEKPLELPAFSLLMGRKIVGGSMIGGMKETQEMI 313
           TVSA H L P + LLK  G LVLVGAPE+PL +P F L+ GRK V GS+IGG KETQEM+
Sbjct: 239 TVSASHDLDPYLSLLKPGGTLVLVGAPEEPLPVPPFPLIFGRKSVAGSLIGGRKETQEML 298

Query: 314 DFAAKHNIRADIEVIPADYVNTALERLAKADVRYRFVID 352
           DFAA+H I+  +EVIP D +N ALERL K DVRYRFV+D
Sbjct: 299 DFAAEHGIKPWVEVIPMDGINEALERLEKGDVRYRFVLD 337

Cinnamyl alcohol dehydrogenases (CAD), members of the medium chain dehydrogenase/reductase family, reduce cinnamaldehydes to cinnamyl alcohols in the last step of monolignal metabolism in plant cells walls. CAD binds 2 zinc ions and is NADPH- dependent. CAD family members are also found in non-plant species, e.g. in yeast where they have an aldehyde reductase activity. The medium chain dehydrogenases/reductase (MDR)/zinc-dependent alcohol dehydrogenase-like family, which contains the zinc-dependent alcohol dehydrogenase (ADH-Zn) and related proteins, is a diverse group of proteins related to the first identified member, class I mammalian ADH. MDRs display a broad range of activities and are distinguished from the smaller short chain dehydrogenases (~ 250 amino acids vs. the ~ 350 amino acids of the MDR). The MDR proteins have 2 domains: a C-terminal NAD(P) binding-Rossmann fold domain of a beta-alpha form and an N-terminal catalytic domain with distant homology to GroES. The MDR group contains a host of activities, including the founding alcohol dehydrogenase (ADH), quinone reductase, sorbitol dehydrogenase, formaldehyde dehydrogenase, butanediol DH, ketose reductase, cinnamyl reductase, and numerous others. The zinc-dependent alcohol dehydrogenases (ADHs) catalyze the NAD(P)(H)-dependent interconversion of alcohols to aldehydes or ketones. Active site zinc has a catalytic role, while structural zinc aids in stability. ADH-like proteins typically form dimers (typically higher plants, mammals) or tetramers (yeast, bacteria), and generally have 2 tightly bound zinc atoms per subunit. The active site zinc is coordinated by a histidine, two cysteines, and a water molecule. The second zinc seems to play a structural role, affects subunit interactions, and is typically coordinated by 4 cysteines. Length = 337

>gnl|CDD|177834 PLN02178, PLN02178, cinnamyl-alcohol dehydrogenase

 Score =  490 bits (1262), Expect = e-175
 Identities = 226/346 (65%), Positives = 277/346 (80%), Gaps = 1/346 (0%)

Query: 13  AFGWAAKDTSGVLSPFHFSRRATGEKDVTFKVTHCGICHSDLHMIKNEWGNTIYPIVPGH 72
           AFGWAA D SGVLSPFHFSRR  GE DVT K+  CG+CHSDLH IKN WG + YPI+PGH
Sbjct: 7   AFGWAANDESGVLSPFHFSRRENGENDVTVKILFCGVCHSDLHTIKNHWGFSRYPIIPGH 66

Query: 73  EIVGVVTEVGSKVSKFKVGDKVGVGCMVGSCRSCDSCAIDLENYCPKVIMTYANKYHDGT 132
           EIVG+ T+VG  V+KFK GD+VGVG ++GSC+SC+SC  DLENYCPKV+ TY ++  DGT
Sbjct: 67  EIVGIATKVGKNVTKFKEGDRVGVGVIIGSCQSCESCNQDLENYCPKVVFTYNSRSSDGT 126

Query: 133 ITYGGYSDIMVADEHFVVRIPEGTPLDATAPLLCAGITVYSPLRFYGLDK-PGMHVGVVG 191
              GGYSD++V D  FV+ IP+G P D+ APLLCAGITVYSP+++YG+ K  G  +GV G
Sbjct: 127 RNQGGYSDVIVVDHRFVLSIPDGLPSDSGAPLLCAGITVYSPMKYYGMTKESGKRLGVNG 186

Query: 192 LGGLGHVAVKFAKAMGVKVTVISTSPSKKSEAIERLGADSFLVSRDQDEMQAAMGTMDGI 251
           LGGLGH+AVK  KA G++VTVIS S  K+ EAI+RLGADSFLV+ D  +M+ A+GTMD I
Sbjct: 187 LGGLGHIAVKIGKAFGLRVTVISRSSEKEREAIDRLGADSFLVTTDSQKMKEAVGTMDFI 246

Query: 252 IDTVSAVHPLMPLIGLLKSQGKLVLVGAPEKPLELPAFSLLMGRKIVGGSMIGGMKETQE 311
           IDTVSA H L+PL  LLK  GKLV +G PEKPL+LP F L++GRK+VGGS IGGMKETQE
Sbjct: 247 IDTVSAEHALLPLFSLLKVSGKLVALGLPEKPLDLPIFPLVLGRKMVGGSQIGGMKETQE 306

Query: 312 MIDFAAKHNIRADIEVIPADYVNTALERLAKADVRYRFVIDVANTM 357
           M++F AKH I +DIE+I    +N+A++RLAK+DVRYRFVIDVAN++
Sbjct: 307 MLEFCAKHKIVSDIELIKMSDINSAMDRLAKSDVRYRFVIDVANSL 352

Length = 375

>gnl|CDD|166155 PLN02514, PLN02514, cinnamyl-alcohol dehydrogenase

 Score =  454 bits (1170), Expect = e-161
 Identities = 195/347 (56%), Positives = 244/347 (70%)

Query: 8   EHPKNAFGWAAKDTSGVLSPFHFSRRATGEKDVTFKVTHCGICHSDLHMIKNEWGNTIYP 67
           E  K   GWAA+D SG LSP+ ++ R TG +DV  KV +CGICH+DLH IKN+ G + YP
Sbjct: 5   EAEKKTTGWAARDPSGHLSPYTYTLRKTGPEDVVIKVIYCGICHTDLHQIKNDLGMSNYP 64

Query: 68  IVPGHEIVGVVTEVGSKVSKFKVGDKVGVGCMVGSCRSCDSCAIDLENYCPKVIMTYANK 127
           +VPGHE+VG V EVGS VSKF VGD VGVG +VG C  C  C  DLE YC K I +Y + 
Sbjct: 65  MVPGHEVVGEVVEVGSDVSKFTVGDIVGVGVIVGCCGECSPCKSDLEQYCNKRIWSYNDV 124

Query: 128 YHDGTITYGGYSDIMVADEHFVVRIPEGTPLDATAPLLCAGITVYSPLRFYGLDKPGMHV 187
           Y DG  T GG++  MV D+ FVV+IPEG   +  APLLCAG+TVYSPL  +GL + G+  
Sbjct: 125 YTDGKPTQGGFASAMVVDQKFVVKIPEGMAPEQAAPLLCAGVTVYSPLSHFGLKQSGLRG 184

Query: 188 GVVGLGGLGHVAVKFAKAMGVKVTVISTSPSKKSEAIERLGADSFLVSRDQDEMQAAMGT 247
           G++GLGG+GH+ VK AKAMG  VTVIS+S  K+ EA+E LGAD +LVS D  EMQ A  +
Sbjct: 185 GILGLGGVGHMGVKIAKAMGHHVTVISSSDKKREEALEHLGADDYLVSSDAAEMQEAADS 244

Query: 248 MDGIIDTVSAVHPLMPLIGLLKSQGKLVLVGAPEKPLELPAFSLLMGRKIVGGSMIGGMK 307
           +D IIDTV   HPL P + LLK  GKL+L+G    PL+     L++GRK++ GS IG MK
Sbjct: 245 LDYIIDTVPVFHPLEPYLSLLKLDGKLILMGVINTPLQFVTPMLMLGRKVITGSFIGSMK 304

Query: 308 ETQEMIDFAAKHNIRADIEVIPADYVNTALERLAKADVRYRFVIDVA 354
           ET+EM++F  +  + + IEV+  DYVNTA ERL K DVRYRFV+DVA
Sbjct: 305 ETEEMLEFCKEKGLTSMIEVVKMDYVNTAFERLEKNDVRYRFVVDVA 351

Length = 357

>gnl|CDD|176207 cd08245, CAD, Cinnamyl alcohol dehydrogenases (CAD) and related proteins

 Score =  415 bits (1069), Expect = e-146
 Identities = 155/339 (45%), Positives = 205/339 (60%), Gaps = 12/339 (3%)

Query: 16  WAAKDTS--GVLSPFHFSRRATGEKDVTFKVTHCGICHSDLHMIKNEWGNTIYPIVPGHE 73
            AA   +  G L P        G  +V  K+  CG+CH+DLH  + +WG + YP+VPGHE
Sbjct: 1   KAAVVHAAGGPLEPEEVPVPEPGPGEVLIKIEACGVCHTDLHAAEGDWGGSKYPLVPGHE 60

Query: 74  IVGVVTEVGSKVSKFKVGDKVGVGCMVGSCRSCDSCAIDLENYCPKVIMTYANKYHDGTI 133
           IVG V EVG+ V   KVGD+VGVG +VGSC  C+ C   LEN C K + T       G  
Sbjct: 61  IVGEVVEVGAGVEGRKVGDRVGVGWLVGSCGRCEYCRRGLENLCQKAVNT-------GYT 113

Query: 134 TYGGYSDIMVADEHFVVRIPEGTPLDATAPLLCAGITVYSPLRFYGLDKPGMHVGVVGLG 193
           T GGY++ MVAD  + V +P+G PL   APLLCAGITVYS LR  G  +PG  V V+G+G
Sbjct: 114 TQGGYAEYMVADAEYTVLLPDGLPLAQAAPLLCAGITVYSALRDAGP-RPGERVAVLGIG 172

Query: 194 GLGHVAVKFAKAMGVKVTVISTSPSKKSEAIERLGADSFLVSRDQDEMQAAMGTMDGIID 253
           GLGH+AV++A+AMG +   I+ SP K+  A  +LGAD  + S  + + QAA G  D I+ 
Sbjct: 173 GLGHLAVQYARAMGFETVAITRSPDKRELAR-KLGADEVVDSGAELDEQAAAGGADVILV 231

Query: 254 TVSAVHPLMPLIGLLKSQGKLVLVGAPEKPLELP-AFSLLMGRKIVGGSMIGGMKETQEM 312
           TV +       +G L+  G++VLVG PE P   P  F L+M R+ + GS  GG  + QE 
Sbjct: 232 TVVSGAAAEAALGGLRRGGRIVLVGLPESPPFSPDIFPLIMKRQSIAGSTHGGRADLQEA 291

Query: 313 IDFAAKHNIRADIEVIPADYVNTALERLAKADVRYRFVI 351
           +DFAA+  ++  IE  P D  N A ER+ K DVR+RFV+
Sbjct: 292 LDFAAEGKVKPMIETFPLDQANEAYERMEKGDVRFRFVL 330

Cinnamyl alcohol dehydrogenases (CAD), members of the medium chain dehydrogenase/reductase family, reduce cinnamaldehydes to cinnamyl alcohols in the last step of monolignal metabolism in plant cells walls. CAD binds 2 zinc ions and is NADPH- dependent. CAD family members are also found in non-plant species, e.g. in yeast where they have an aldehyde reductase activity. The medium chain dehydrogenases/reductase (MDR)/zinc-dependent alcohol dehydrogenase-like family, which contains the zinc-dependent alcohol dehydrogenase (ADH-Zn) and related proteins, is a diverse group of proteins related to the first identified member, class I mammalian ADH. MDRs display a broad range of activities and are distinguished from the smaller short chain dehydrogenases (~ 250 amino acids vs. the ~ 350 amino acids of the MDR). The MDR proteins have 2 domains: a C-terminal NAD(P) binding-Rossmann fold domain of a beta-alpha form and an N-terminal catalytic domain with distant homology to GroES. The MDR group contains a host of activities, including the founding alcohol dehydrogenase (ADH), quinone reductase, sorbitol dehydrogenase, formaldehyde dehydrogenase, butanediol DH, ketose reductase, cinnamyl reductase, and numerous others. The zinc-dependent alcohol dehydrogenases (ADHs) catalyze the NAD(P)(H)-dependent interconversion of alcohols to aldehydes, or ketones. Active site zinc has a catalytic role, while structural zinc aids in stability. ADH-like proteins typically form dimers (typically higher plants, mammals) or tetramers (yeast, bacteria), and generally have 2 tightly bound zinc atoms per subunit. The active site zinc is coordinated by a histidine, two cysteines, and a water molecule. The second zinc seems to play a structural role, affects subunit interactions, and is typically coordinated by 4 cysteines. Length = 330

>gnl|CDD|223992 COG1064, AdhP, Zn-dependent alcohol dehydrogenases [General function prediction only]

 Score =  366 bits (942), Expect = e-126
 Identities = 148/341 (43%), Positives = 192/341 (56%), Gaps = 13/341 (3%)

Query: 15  GWAAKDTSGVLSPFHFSRRATGEKDVTFKVTHCGICHSDLHMIKNEWGNTIYPIVPGHEI 74
               K     L          G  +V  KV  CG+CH+DLH+ K +W     P++PGHEI
Sbjct: 6   AAVLKKFGQPLEIEEVPVPEPGPGEVLIKVEACGVCHTDLHVAKGDWPVPKLPLIPGHEI 65

Query: 75  VGVVTEVGSKVSKFKVGDKVGVGCMVGSCRSCDSCAIDLENYCPKVIMTYANKYHDGTIT 134
           VG V EVG  V+  KVGD+VGVG +V SC  C+ C    EN CP   +T       G  T
Sbjct: 66  VGTVVEVGEGVTGLKVGDRVGVGWLVISCGECEYCRSGNENLCPNQKIT-------GYTT 118

Query: 135 YGGYSDIMVADEHFVVRIPEGTPLDATAPLLCAGITVYSPLRFYGLDKPGMHVGVVGLGG 194
            GGY++ +V    +VV+IPEG  L   APLLCAGIT Y  L+   + KPG  V VVG GG
Sbjct: 119 DGGYAEYVVVPARYVVKIPEGLDLAEAAPLLCAGITTYRALKKANV-KPGKWVAVVGAGG 177

Query: 195 LGHVAVKFAKAMGVKVTVISTSPSKKSEAIERLGADSFLVSRDQDEMQAAMGTMDGIIDT 254
           LGH+AV++AKAMG +V  I+ S  K   A ++LGAD  + S D D ++A     D IIDT
Sbjct: 178 LGHMAVQYAKAMGAEVIAITRSEEKLELA-KKLGADHVINSSDSDALEAVKEIADAIIDT 236

Query: 255 VSAVHPLMPLIGLLKSQGKLVLVGAP--EKPLELPAFSLLMGRKIVGGSMIGGMKETQEM 312
           V     L P +  L+  G LVLVG P       LPAF L++    + GS++G   + +E 
Sbjct: 237 VGP-ATLEPSLKALRRGGTLVLVGLPGGGPIPLLPAFLLILKEISIVGSLVGTRADLEEA 295

Query: 313 IDFAAKHNIRADI-EVIPADYVNTALERLAKADVRYRFVID 352
           +DFAA+  I+ +I E IP D +N A ER+ K  VR R VID
Sbjct: 296 LDFAAEGKIKPEILETIPLDEINEAYERMEKGKVRGRAVID 336

Length = 339

>gnl|CDD|176256 cd08296, CAD_like, Cinnamyl alcohol dehydrogenases (CAD)

 Score =  254 bits (650), Expect = 1e-82
 Identities = 118/324 (36%), Positives = 176/324 (54%), Gaps = 17/324 (5%)

Query: 33  RATGEKDVTFKVTHCGICHSDLHMIKNEWGNTIYPIVPGHEIVGVVTEVGSKVSKFKVGD 92
              G  +V  KV  CG+CHSD  + +       YP VPGHE+VG +  VG  VS++KVGD
Sbjct: 21  PLPGPGEVLIKVEACGVCHSDAFVKEGAMPGLSYPRVPGHEVVGRIDAVGEGVSRWKVGD 80

Query: 93  KVGVGCMVGSCRSCDSCAIDLENYCPKVIMTYANKYHDGTITY-GGYSDIMVADEHFVVR 151
           +VGVG   G C +CD+C      +C        N    G +T  GGY++ M+A    + R
Sbjct: 81  RVGVGWHGGHCGTCDACRRGDFVHC-------ENGKVTG-VTRDGGYAEYMLAPAEALAR 132

Query: 152 IPEGTPLDAT--APLLCAGITVYSPLRFYGLDKPGMHVGVVGLGGLGHVAVKFAKAMGVK 209
           IP+   LDA   APLLCAG+T ++ LR  G  KPG  V V G+GGLGH+AV++A  MG +
Sbjct: 133 IPDD--LDAAEAAPLLCAGVTTFNALRNSGA-KPGDLVAVQGIGGLGHLAVQYAAKMGFR 189

Query: 210 VTVISTSPSKKSEAIERLGADSFLVSRDQDEMQA--AMGTMDGIIDTVSAVHPLMPLIGL 267
              IS    K   A + LGA  ++ +  +D  +A   +G    I+ T      +  L+G 
Sbjct: 190 TVAISRGSDKADLARK-LGAHHYIDTSKEDVAEALQELGGAKLILATAPNAKAISALVGG 248

Query: 268 LKSQGKLVLVGAPEKPLELPAFSLLMGRKIVGGSMIGGMKETQEMIDFAAKHNIRADIEV 327
           L  +GKL+++GA  +P+ +    L+MGRK + G   G   ++++ + F+A H +R  +E 
Sbjct: 249 LAPRGKLLILGAAGEPVAVSPLQLIMGRKSIHGWPSGTALDSEDTLKFSALHGVRPMVET 308

Query: 328 IPADYVNTALERLAKADVRYRFVI 351
            P +  N A +R+     R+R V+
Sbjct: 309 FPLEKANEAYDRMMSGKARFRVVL 332

Cinnamyl alcohol dehydrogenases (CAD), members of the medium chain dehydrogenase/reductase family, reduce cinnamaldehydes to cinnamyl alcohols in the last step of monolignal metabolism in plant cells walls. CAD binds 2 zinc ions and is NADPH- dependent. CAD family members are also found in non-plant species, e.g. in yeast where they have an aldehyde reductase activity. The medium chain dehydrogenases/reductase (MDR)/zinc-dependent alcohol dehydrogenase-like family, which contains the zinc-dependent alcohol dehydrogenase (ADH-Zn) and related proteins, is a diverse group of proteins related to the first identified member, class I mammalian ADH. MDRs display a broad range of activities and are distinguished from the smaller short chain dehydrogenases (~ 250 amino acids vs. the ~ 350 amino acids of the MDR). The MDR proteins have 2 domains: a C-terminal NAD(P) binding-Rossmann fold domain of a beta-alpha form and an N-terminal catalytic domain with distant homology to GroES. The MDR group contains a host of activities, including the founding alcohol dehydrogenase (ADHs), quinone reductase, sorbitol dehydrogenase, formaldehyde dehydrogenase, butanediol DH, ketose reductase, cinnamyl reductase, and numerous others. The zinc-dependent alcohol dehydrogenases (ADHs) catalyze the NAD(P)(H)-dependent interconversion of alcohols to aldehydes or ketones. Active site zinc has a catalytic role, while structural zinc aids in stability. ADH-like proteins typically form dimers (typically higher plants, mammals) or tetramers (yeast, bacteria), and generally have 2 tightly bound zinc atoms per subunit. The active site zinc is coordinated by a histidine, two cysteines, and a water molecule. The second zinc seems to play a structural role, affects subunit interactions, and is typically coordinated by 4 cysteines. Length = 333

>gnl|CDD|176257 cd08297, CAD3, Cinnamyl alcohol dehydrogenases (CAD)

 Score =  248 bits (635), Expect = 3e-80
 Identities = 113/327 (34%), Positives = 170/327 (51%), Gaps = 19/327 (5%)

Query: 36  GEKDVTFKVTHCGICHSDLHMIKNEWG-NTIYPIVPGHEIVGVVTEVGSKVSKFKVGDKV 94
           G  +V  K+   G+CH+DLH    +W      P++ GHE  GVV  VG  VS  KVGD+V
Sbjct: 25  GPGEVLVKLEASGVCHTDLHAALGDWPVKPKLPLIGGHEGAGVVVAVGPGVSGLKVGDRV 84

Query: 95  GVGCMVGSCRSCDSCAIDLENYCPKVIMTYANKYHDGTITYGGYSDIMVADEHFVVRIPE 154
           GV  +  +C  C+ C    E  CP    +       G    G +++  +AD  +V  IP+
Sbjct: 85  GVKWLYDACGKCEYCRTGDETLCPNQKNS-------GYTVDGTFAEYAIADARYVTPIPD 137

Query: 155 GTPLDATAPLLCAGITVYSPLRFYGLDKPGMHVGVVGLGG-LGHVAVKFAKAMGVKVTVI 213
           G   +  APLLCAG+TVY  L+  GL KPG  V + G GG LGH+ V++AKAMG++V  I
Sbjct: 138 GLSFEQAAPLLCAGVTVYKALKKAGL-KPGDWVVISGAGGGLGHLGVQYAKAMGLRVIAI 196

Query: 214 STSPSKKSEAIERLGADSFLVSRDQD---EMQAAMGTM--DGIIDTVSAVHPLMPLIGLL 268
                K  E  + LGAD+F+  +  D    ++   G      ++ T  +       +  L
Sbjct: 197 DVGDEKL-ELAKELGADAFVDFKKSDDVEAVKELTGGGGAHAVVVTAVSAAAYEQALDYL 255

Query: 269 KSQGKLVLVGAPEK-PLELPAFSL-LMGRKIVGGSMIGGMKETQEMIDFAAKHNIRADIE 326
           +  G LV VG P    + L  F L L G  IV GS++G  ++ QE ++FAA+  ++  I+
Sbjct: 256 RPGGTLVCVGLPPGGFIPLDPFDLVLRGITIV-GSLVGTRQDLQEALEFAARGKVKPHIQ 314

Query: 327 VIPADYVNTALERLAKADVRYRFVIDV 353
           V+P + +N   E++ +  +  R V+D 
Sbjct: 315 VVPLEDLNEVFEKMEEGKIAGRVVVDF 341

These alcohol dehydrogenases are related to the cinnamyl alcohol dehydrogenases (CAD), members of the medium chain dehydrogenase/reductase family. NAD(P)(H)-dependent oxidoreductases are the major enzymes in the interconversion of alcohols and aldehydes, or ketones. Cinnamyl alcohol dehydrogenases (CAD) reduce cinnamaldehydes to cinnamyl alcohols in the last step of monolignal metabolism in plant cells walls. CAD binds 2 zinc ions and is NADPH- dependent. CAD family members are also found in non-plant species, e.g. in yeast where they have an aldehyde reductase activity. The medium chain dehydrogenases/reductase (MDR)/zinc-dependent alcohol dehydrogenase-like family, which contains the zinc-dependent alcohol dehydrogenase (ADH-Zn) and related proteins, is a diverse group of proteins related to the first identified member, class I mammalian ADH. MDRs display a broad range of activities and are distinguished from the smaller short chain dehydrogenases (~ 250 amino acids vs. the ~ 350 amino acids of the MDR). The MDR proteins have 2 domains: a C-terminal NAD(P) binding-Rossmann fold domain of a beta-alpha form and an N-terminal catalytic domain with distant homology to GroES. The MDR group contains a host of activities, including the founding alcohol dehydrogenase (ADH), quinone reductase, sorbitol dehydrogenase, formaldehyde dehydrogenase, butanediol DH, ketose reductase, cinnamyl reductase, and numerous others. The zinc-dependent alcohol dehydrogenases (ADHs) catalyze the NAD(P)(H)-dependent interconversion of alcohols to aldehydes or ketones. Active site zinc has a catalytic role, while structural zinc aids in stability. ADH-like proteins typically form dimers (typically higher plants, mammals) or tetramers (yeast, bacteria), and generally have 2 tightly bound zinc atoms per subunit. The active site zinc is coordinated by a histidine, two cysteines, and a water molecule. The second zinc seems to play a structural role, affects subunit interactions, and is typically coordinated by 4 cysteines. Length = 341

>gnl|CDD|176258 cd08298, CAD2, Cinnamyl alcohol dehydrogenases (CAD)

 Score =  221 bits (566), Expect = 6e-70
 Identities = 104/316 (32%), Positives = 153/316 (48%), Gaps = 14/316 (4%)

Query: 36  GEKDVTFKVTHCGICHSDLHMIKNEWGNTIYPIVPGHEIVGVVTEVGSKVSKFKVGDKVG 95
           G  +V  KV  CG+C +DLH+++ +      P++PGHEIVG V  VG  V++F VGD+VG
Sbjct: 28  GPGEVLIKVEACGVCRTDLHIVEGDLPPPKLPLIPGHEIVGRVEAVGPGVTRFSVGDRVG 87

Query: 96  VGCMVGSCRSCDSCAIDLENYCPKVIMTYANKYHDGTITYGGYSDIMVADEHFVVRIPEG 155
           V  +  +C  C  C    EN C     T       G    GGY++ MVADE F   IPE 
Sbjct: 88  VPWLGSTCGECRYCRSGRENLCDNARFT-------GYTVDGGYAEYMVADERFAYPIPED 140

Query: 156 TPLDATAPLLCAGITVYSPLRFYGLDKPGMHVGVVGLGGLGHVAVKFAKAMGVKVTVIST 215
              +  APLLCAGI  Y  L+  GL KPG  +G+ G G   H+A++ A+  G +V   + 
Sbjct: 141 YDDEEAAPLLCAGIIGYRALKLAGL-KPGQRLGLYGFGASAHLALQIARYQGAEVFAFTR 199

Query: 216 SPSKKSEAIERLGADSFLVSRDQDEMQAAMGTMDGIIDTVSAVHPLMPLIGLLKSQGKLV 275
           S   +  A E LGAD    S D          +D  I        +   +  +K  G++V
Sbjct: 200 SGEHQELARE-LGADWAGDSDDLPP-----EPLDAAIIFAPVGALVPAALRAVKKGGRVV 253

Query: 276 LVGAPEKPLELPAFSLLMGRKIVGGSMIGGMKETQEMIDFAAKHNIRADIEVIPADYVNT 335
           L G     +    + LL G K +        ++ +E +  AA+  I+ ++E  P +  N 
Sbjct: 254 LAGIHMSDIPAFDYELLWGEKTIRSVANLTRQDGEEFLKLAAEIPIKPEVETYPLEEANE 313

Query: 336 ALERLAKADVRYRFVI 351
           AL+ L +  +R   V+
Sbjct: 314 ALQDLKEGRIRGAAVL 329

These alcohol dehydrogenases are related to the cinnamyl alcohol dehydrogenases (CAD), members of the medium chain dehydrogenase/reductase family. NAD(P)(H)-dependent oxidoreductases are the major enzymes in the interconversion of alcohols and aldehydes, or ketones. Cinnamyl alcohol dehydrogenases (CAD) reduce cinnamaldehydes to cinnamyl alcohols in the last step of monolignal metabolism in plant cells walls. CAD binds 2 zinc ions and is NADPH- dependent. CAD family members are also found in non-plant species, e.g. in yeast where they have an aldehyde reductase activity. The medium chain dehydrogenases/reductase (MDR)/zinc-dependent alcohol dehydrogenase-like family, which contains the zinc-dependent alcohol dehydrogenase (ADH-Zn) and related proteins, is a diverse group of proteins related to the first identified member, class I mammalian ADH. MDRs display a broad range of activities and are distinguished from the smaller short chain dehydrogenases (~ 250 amino acids vs. the ~ 350 amino acids of the MDR). The MDR proteins have 2 domains: a C-terminal NAD(P) binding-Rossmann fold domain of a beta-alpha form and an N-terminal catalytic domain with distant homology to GroES. The MDR group contains a host of activities, including the founding alcohol dehydrogenase (ADH), quinone reductase, sorbitol dehydrogenase, formaldehyde dehydrogenase, butanediol DH, ketose reductase, cinnamyl reductase, and numerous others. The zinc-dependent alcohol dehydrogenases (ADHs) catalyze the NAD(P)(H)-dependent interconversion of alcohols to aldehydes or ketones. Active site zinc has a catalytic role, while structural zinc aids in stability. ADH-like proteins typically form dimers (typically higher plants, mammals) or tetramers (yeast, bacteria), and generally have 2 tightly bound zinc atoms per subunit. The active site zinc is coordinated by a histidine, two cysteines, and a water molecule. The second zinc seems to play a structural role, affects subunit interactions, and is typically coordinated by 4 cysteines. Length = 329

>gnl|CDD|176187 cd05284, arabinose_DH_like, D-arabinose dehydrogenase

 Score =  194 bits (495), Expect = 3e-59
 Identities = 105/323 (32%), Positives = 145/323 (44%), Gaps = 21/323 (6%)

Query: 39  DVTFKVTHCGICHSDLHMIKNEWGNT---IYPIVPGHEIVGVVTEVGSKVSKFKVGDKVG 95
            V  +V   G+CHSDLH+I   WG       P   GHE  G V EVGS V   K GD V 
Sbjct: 27  QVLVRVGGAGVCHSDLHVIDGVWGGILPYKLPFTLGHENAGWVEEVGSGVDGLKEGDPVV 86

Query: 96  VGCMVGSCRSCDSCAIDLENYCPKVIMTYANKYHDGTITYGGYSDIMVADEHFVVRIPEG 155
           V    G C +C  C    ENYC                T GG+++ ++     +V++P G
Sbjct: 87  VHPPWG-CGTCRYCRRGEENYCENARFPGIG-------TDGGFAEYLLVPSRRLVKLPRG 138

Query: 156 TPLDATAPLLCAGITVYSPLRFYGLDK-PGMHVGVVGLGGLGHVAVKFAKAM-GVKVTVI 213
                 APL  AG+T Y  ++       PG  V V+G+GGLGH+AV+  +A+    V  +
Sbjct: 139 LDPVEAAPLADAGLTAYHAVKKALPYLDPGSTVVVIGVGGLGHIAVQILRALTPATVIAV 198

Query: 214 STSPSKKSEAIERLGADSFLVSRDQDEMQAAMGTMDG-----IIDTVSAVHPLMPLIGLL 268
             S      A ERLGAD  L + D D ++       G     +ID V +   L     LL
Sbjct: 199 DRSEEALKLA-ERLGADHVLNASD-DVVEEVRELTGGRGADAVIDFVGSDETLALAAKLL 256

Query: 269 KSQGKLVLVGAPEKPLELPAFSLLMGRKIVGGSMIGGMKETQEMIDFAAKHNIRADIEVI 328
              G+ V+VG       LP   L+     V GS+ G   E  E++  A    ++ +I   
Sbjct: 257 AKGGRYVIVGYGGH-GRLPTSDLVPTEISVIGSLWGTRAELVEVVALAESGKVKVEITKF 315

Query: 329 PADYVNTALERLAKADVRYRFVI 351
           P +  N AL+RL +  V  R V+
Sbjct: 316 PLEDANEALDRLREGRVTGRAVL 338

This group contains arabinose dehydrogenase (AraDH) and related alcohol dehydrogenases. AraDH is a member of the medium chain dehydrogenase/reductase family and catalyzes the NAD(P)-dependent oxidation of D-arabinose and other pentoses, the initial step in the metabolism of d-arabinose into 2-oxoglutarate. Like the alcohol dehydrogenases, AraDH binds a zinc in the catalytic cleft as well as a distal structural zinc. AraDH forms homotetramers as a dimer of dimers. AraDH replaces a conserved catalytic His with replace with Arg, compared to the canonical ADH site. NAD(P)(H)-dependent oxidoreductases are the major enzymes in the interconversion of alcohols and aldehydes, or ketones. Alcohol dehydrogenase in the liver converts ethanol and NAD+ to acetaldehyde and NADH, while in yeast and some other microorganisms ADH catalyzes the conversion acetaldehyde to ethanol in alcoholic fermentation. ADH is a member of the medium chain alcohol dehydrogenase family (MDR), which has a NAD(P)(H)-binding domain in a Rossmann fold of a beta-alpha form. The NAD(H)-binding region is comprised of 2 structurally similar halves, each of which contacts a mononucleotide. A GxGxxG motif after the first mononucleotide contact half allows the close contact of the coenzyme with the ADH backbone. The N-terminal catalytic domain has a distant homology to GroES. These proteins typically form dimers (typically higher plants, mammals) or tetramers (yeast, bacteria), and have 2 tightly bound zinc atoms per subunit, a catalytic zinc at the active site and a structural zinc in a lobe of the catalytic domain. NAD(H) binding occurs in the cleft between the catalytic and coenzyme-binding domains at the active site, and coenzyme binding induces a conformational closing of this cleft. Coenzyme binding typically precedes and contributes to substrate binding. In human ADH catalysis, the zinc ion helps coordinate the alcohol, followed by deprotonation of a histidine, the ribose of NAD, a serine, then the alcohol, which allows the transfer of a hydride to NAD+, creating NADH and a zinc-bound aldehyde or ketone. In yeast and some bacteria, the active site zinc binds an aldehyde, polarizing it, and leading to the reverse reaction. Length = 340

>gnl|CDD|176202 cd08240, 6_hydroxyhexanoate_dh_like, 6-hydroxyhexanoate dehydrogenase

 Score =  183 bits (468), Expect = 3e-55
 Identities = 104/332 (31%), Positives = 148/332 (44%), Gaps = 27/332 (8%)

Query: 38  KDVTFKVTHCGICHSDLHMIKNEW----GNTI--------YPIVPGHEIVGVVTEVGSKV 85
            +V  KVT CG+CHSDLH+    +    G T+         P+V GHEIVG V  VG   
Sbjct: 26  TEVLVKVTACGVCHSDLHIWDGGYDLGGGKTMSLDDRGVKLPLVLGHEIVGEVVAVGPDA 85

Query: 86  SKFKVGDKVGVGCMVGSCRSCDSCAIDLENYCPKVIMTYANKYHDGTITYGGYSDIMVAD 145
           +  KVGDKV V   +G C  C  C    EN C K           G    GGY++ ++  
Sbjct: 86  ADVKVGDKVLVYPWIG-CGECPVCLAGDENLCAK-------GRALGIFQDGGYAEYVIVP 137

Query: 146 EHFVVRIPEGTPLDATAPLLCAGITVYSPLRFYGLDKPGMHVGVVGLGGLGHVAVKFAKA 205
               +  P G      A L C+G+T YS ++          V ++G GGLG +A+   KA
Sbjct: 138 HSRYLVDPGGLDPALAATLACSGLTAYSAVKKLMPLVADEPVVIIGAGGLGLMALALLKA 197

Query: 206 MG-VKVTVISTSPSKKSEAIERLGADSFLVSRDQDE----MQAAMGTMDGIIDTVSAVHP 260
           +G   + V+    +K   A    GAD  +   D D     ++AA G +D +ID V+    
Sbjct: 198 LGPANIIVVDIDEAKLEAAKAA-GADVVVNGSDPDAAKRIIKAAGGGVDAVIDFVNNSAT 256

Query: 261 LMPLIGLLKSQGKLVLVGAPEKPLELPAFSLLMGRKIVGGSMIGGMKETQEMIDFAAKHN 320
                 +L   GKLVLVG       LP   L +    + GS +G ++E +E++  A    
Sbjct: 257 ASLAFDILAKGGKLVLVGLFGGEATLPLPLLPLRALTIQGSYVGSLEELRELVALAKAGK 316

Query: 321 I-RADIEVIPADYVNTALERLAKADVRYRFVI 351
           +    +   P   VN AL+ L    V  R V+
Sbjct: 317 LKPIPLTERPLSDVNDALDDLKAGKVVGRAVL 348

6-hydroxyhexanoate dehydrogenase, an enzyme of the zinc-dependent alcohol dehydrogenase-like family of medium chain dehydrogenases/reductases catalyzes the conversion of 6-hydroxyhexanoate and NAD(+) to 6-oxohexanoate + NADH and H+. NAD(P)(H)-dependent oxidoreductases are the major enzymes in the interconversion of alcohols and aldehydes, or ketones. Alcohol dehydrogenase in the liver converts ethanol and NAD+ to acetaldehyde and NADH, while in yeast and some other microorganisms ADH catalyzes the conversion acetaldehyde to ethanol in alcoholic fermentation. ADH is a member of the medium chain alcohol dehydrogenase family (MDR), which has a NAD(P)(H)-binding domain in a Rossmann fold of a beta-alpha form. The NAD(H)-binding region is comprised of 2 structurally similar halves, each of which contacts a mononucleotide. A GxGxxG motif after the first mononucleotide contact half allows the close contact of the coenzyme with the ADH backbone. The N-terminal catalytic domain has a distant homology to GroES. These proteins typically form dimers (typically higher plants, mammals) or tetramers (yeast, bacteria), and have 2 tightly bound zinc atoms per subunit, a catalytic zinc at the active site and a structural zinc in a lobe of the catalytic domain. NAD(H)-binding occurs in the cleft between the catalytic and coenzyme-binding domains, at the active site, and coenzyme binding induces a conformational closing of this cleft. Coenzyme binding typically precedes and contributes to substrate binding. In human ADH catalysis, the zinc ion helps coordinate the alcohol, followed by deprotonation of a histidine, the ribose of NAD, a serine, then the alcohol, which allows the transfer of a hydride to NAD+, creating NADH and a zinc-bound aldehyde or ketone. In yeast and some bacteria, the active site zinc binds an aldehyde, polarizing it, and leading to the reverse reaction. Length = 350

>gnl|CDD|176178 cd05188, MDR, Medium chain reductase/dehydrogenase (MDR)/zinc-dependent alcohol dehydrogenase-like family

 Score =  180 bits (458), Expect = 1e-54
 Identities = 86/283 (30%), Positives = 135/283 (47%), Gaps = 19/283 (6%)

Query: 39  DVTFKVTHCGICHSDLHMIKNEWGNTI-YPIVPGHEIVGVVTEVGSKVSKFKVGDKVGVG 97
           +V  +V   G+C +DLH+ +  +      P++ GHE  GVV EVG  V+  KVGD+V V 
Sbjct: 1   EVLVRVEAAGLCGTDLHIRRGGYPPPPKLPLILGHEGAGVVVEVGPGVTGVKVGDRVVVL 60

Query: 98  CMVGSCRSCDSCAIDLENYCPKVIMTYANKYHDGTITYGGYSDIMVADEHFVVRIPEGTP 157
             +G C +C+ C                     G    GG+++ +V     +V +P+G  
Sbjct: 61  PNLG-CGTCELCR-----------ELCPGGGILGEGLDGGFAEYVVVPADNLVPLPDGLS 108

Query: 158 LDATAPLLCAGITVYSPLRFYGLDKPGMHVGVVGLGGLGHVAVKFAKAMGVKVTVISTSP 217
           L+  A L     T Y  LR  G+ KPG  V V+G GG+G +A + AKA G +V V   S 
Sbjct: 109 LEEAALLPEPLATAYHALRRAGVLKPGDTVLVLGAGGVGLLAAQLAKAAGARVIVTDRSD 168

Query: 218 SKKSEAIERLGADSFLVSRDQDEMQAAMGT----MDGIIDTVSAVHPLMPLIGLLKSQGK 273
            K  E  + LGAD  +  +++D  +    T     D +ID V     L   + LL+  G+
Sbjct: 169 EKL-ELAKELGADHVIDYKEEDLEEELRLTGGGGADVVIDAVGGPETLAQALRLLRPGGR 227

Query: 274 LVLVGAPEKPLELPAFSLLMGRKI-VGGSMIGGMKETQEMIDF 315
           +V+VG       L     L+ +++ + GS  G  ++ +E +D 
Sbjct: 228 IVVVGGTSGGPPLDDLRRLLFKELTIIGSTGGTREDFEEALDL 270

The medium chain reductase/dehydrogenases (MDR)/zinc-dependent alcohol dehydrogenase-like family, which contains the zinc-dependent alcohol dehydrogenase (ADH-Zn) and related proteins, is a diverse group of proteins related to the first identified member, class I mammalian ADH. MDRs display a broad range of activities and are distinguished from the smaller short chain dehydrogenases (~ 250 amino acids vs. the ~ 350 amino acids of the MDR). The MDR proteins have 2 domains: a C-terminal NAD(P) binding-Rossmann fold domain of a beta-alpha form and an N-terminal catalytic domain with distant homology to GroES. The MDR group contains a host of activities, including the founding alcohol dehydrogenase (ADH) , quinone reductase, sorbitol dehydrogenase, formaldehyde dehydrogenase, butanediol DH, ketose reductase, cinnamyl reductase, and numerous others. The zinc-dependent alcohol dehydrogenases (ADHs) catalyze the NAD(P)(H)-dependent interconversion of alcohols to aldehydes or ketones. ADH-like proteins typically form dimers (typically higher plants, mammals) or tetramers (yeast, bacteria), and generally have 2 tightly bound zinc atoms per subunit, a catalytic zinc at the active site and a structural zinc in a lobe of the catalytic domain. The active site zinc is coordinated by a histidine, two cysteines, and a water molecule. The second zinc seems to play a structural role, affects subunit interactions, and is typically coordinated by 4 cysteines. Other MDR members have only a catalytic zinc, and some contain no coordinated zinc. Length = 271

>gnl|CDD|176216 cd08254, hydroxyacyl_CoA_DH, 6-hydroxycyclohex-1-ene-1-carboxyl-CoA dehydrogenase, N-benzyl-3-pyrrolidinol dehydrogenase, and other MDR family members

 Score =  177 bits (451), Expect = 9e-53
 Identities = 107/329 (32%), Positives = 146/329 (44%), Gaps = 28/329 (8%)

Query: 36  GEKDVTFKVTHCGICHSDLHMIKNE-WGNTIYPIVPGHEIVGVVTEVGSKVSKFKVGDKV 94
           G  +V  KV   G+CHSDLH++       T  P+  GHEI G V EVG+ V+ FKVGD+V
Sbjct: 25  GPGEVLVKVKAAGVCHSDLHILDGGVPTLTKLPLTLGHEIAGTVVEVGAGVTNFKVGDRV 84

Query: 95  GVGCMVGSCRSCDSCAIDLENYCPKVIMTYANKYHDGTITYGGYSDIMVADEHFVVRIPE 154
            V   V  C +C  C     N C    M        G    GG+++ +V     +V +P+
Sbjct: 85  AV-PAVIPCGACALCRRGRGNLCLNQGMP-------GLGIDGGFAEYIVVPARALVPVPD 136

Query: 155 GTPLDATAPLLCAGITVYSPLRFYGLDKPGMHVGVVGLGGLGHVAVKFAKAMGVKVTVIS 214
           G P    A    A +T Y  +   G  KPG  V V+GLGGLG  AV+ AKAMG  V  + 
Sbjct: 137 GVPFAQAAVATDAVLTPYHAVVRAGEVKPGETVLVIGLGGLGLNAVQIAKAMGAAVIAVD 196

Query: 215 TSPSKKSEAIERLGADSFLVSRDQDEMQAAMGTMDGIIDTV-----------SAVHPLMP 263
               K   A E LGAD  L S D          + G  D +            A      
Sbjct: 197 IKEEKLELAKE-LGADEVLNSLDDSPKDKKAAGLGGGFDVIFDFVGTQPTFEDAQK---- 251

Query: 264 LIGLLKSQGKLVLVGAPEKPLELPAFSLLMGRKIVGGSMIGGMKETQEMIDFAAKHNIRA 323
               +K  G++V+VG     L +    L+     + GS  G  ++  E++D  AK  +  
Sbjct: 252 ---AVKPGGRIVVVGLGRDKLTVDLSDLIARELRIIGSFGGTPEDLPEVLDLIAKGKLDP 308

Query: 324 DIEVIPADYVNTALERLAKADVRYRFVID 352
            +E  P D +   LERL K  V+ R V+ 
Sbjct: 309 QVETRPLDEIPEVLERLHKGKVKGRVVLV 337

This group contains enzymes of the zinc-dependent alcohol dehydrogenase family, including members (aka MDR) identified as 6-hydroxycyclohex-1-ene-1-carboxyl-CoA dehydrogenase and N-benzyl-3-pyrrolidinol dehydrogenase. 6-hydroxycyclohex-1-ene-1-carboxyl-CoA dehydrogenase catalyzes the conversion of 6-Hydroxycyclohex-1-enecarbonyl-CoA and NAD+ to 6-Ketoxycyclohex-1-ene-1-carboxyl-CoA,NADH, and H+. This group displays the characteristic catalytic and structural zinc sites of the zinc-dependent alcohol dehydrogenases. NAD(P)(H)-dependent oxidoreductases are the major enzymes in the interconversion of alcohols and aldehydes, or ketones. Alcohol dehydrogenase in the liver converts ethanol and NAD+ to acetaldehyde and NADH, while in yeast and some other microorganisms ADH catalyzes the conversion acetaldehyde to ethanol in alcoholic fermentation. ADH is a member of the medium chain alcohol dehydrogenase family (MDR), which have a NAD(P)(H)-binding domain in a Rossmann fold of a beta-alpha form. The NAD(H)-binding region is comprised of 2 structurally similar halves, each of which contacts a mononucleotide. A GxGxxG motif after the first mononucleotide contact half allows the close contact of the coenzyme with the ADH backbone. The N-terminal catalytic domain has a distant homology to GroES. These proteins typically form dimers (typically higher plants, mammals) or tetramers (yeast, bacteria), and have 2 tightly bound zinc atoms per subunit, a catalytic zinc at the active site and a structural zinc in a lobe of the catalytic domain. NAD(H)-binding occurs in the cleft between the catalytic and coenzyme-binding domains at the active site, and coenzyme binding induces a conformational closing of this cleft. Coenzyme binding typically precedes and contributes to substrate binding. In human ADH catalysis, the zinc ion helps coordinate the alcohol, followed by deprotonation of a histidine, the ribose of NAD, a serine, then the alcohol, which allows the transfer of a hydride to NAD+, creating NADH and a zinc-bound aldehyde or ketone. In yeast and some bacteria, the active site zinc binds an aldehyde, polarizing it, and leading to the reverse reaction. Length = 338

>gnl|CDD|176220 cd08259, Zn_ADH5, Alcohol dehydrogenases of the MDR family

 Score =  159 bits (404), Expect = 7e-46
 Identities = 95/321 (29%), Positives = 153/321 (47%), Gaps = 16/321 (4%)

Query: 36  GEKDVTFKVTHCGICHSDLHMIKNEWGNTIYPIVPGHEIVGVVTEVGSKVSKFKVGDKVG 95
           G  +V  KV   G+C+ DL   K  +    YP++ GHEIVG V EVG  V +FK GD+V 
Sbjct: 24  GPGEVLIKVKAAGVCYRDLLFWKGFFPRGKYPLILGHEIVGTVEEVGEGVERFKPGDRVI 83

Query: 96  VGCMVGSCRSCDSCAIDLENYCPKVIMTYANKYHDGTITYGGYSDIMVADEHFVVRIPEG 155
           +   +  C  C+ C    EN C        N+   G    GG+++ +   E  +V++P+ 
Sbjct: 84  LYYYIP-CGKCEYCLSGEENLCR-------NRAEYGEEVDGGFAEYVKVPERSLVKLPDN 135

Query: 156 TPLDATAPLLCAGITVYSPLRFYGLDKPGMHVGVVG-LGGLGHVAVKFAKAMGVKVTVIS 214
              ++ A   C   T    L+  G+ K G  V V G  GG+G  A++ AKA+G +V  ++
Sbjct: 136 VSDESAALAACVVGTAVHALKRAGV-KKGDTVLVTGAGGGVGIHAIQLAKALGARVIAVT 194

Query: 215 TSPSKKSEAIERLGADSFLVSRDQDEMQAAMGTMDGIIDTVSAVHPLMPLIGLLKSQGKL 274
            SP K  + ++ LGAD  +      E    +G  D +I+ V +   +   +  L   G+L
Sbjct: 195 RSPEKL-KILKELGADYVIDGSKFSEDVKKLGGADVVIELVGS-PTIEESLRSLNKGGRL 252

Query: 275 VLVG--APEKPLELPAFSLLMGRKIVGGSMIGGMKETQEMIDFAAKHNIRADIE-VIPAD 331
           VL+G   P+     P   +L   +I+ GS+     + +E +    +  I+  I+ V+  +
Sbjct: 253 VLIGNVTPDPAPLRPGLLILKEIRII-GSISATKADVEEALKLVKEGKIKPVIDRVVSLE 311

Query: 332 YVNTALERLAKADVRYRFVID 352
            +N ALE L    V  R V+ 
Sbjct: 312 DINEALEDLKSGKVVGRIVLK 332

NAD(P)(H)-dependent oxidoreductases are the major enzymes in the interconversion of alcohols and aldehydes, or ketones. This group contains proteins that share the characteristic catalytic and structural zinc-binding sites of the zinc-dependent alcohol dehydrogenase family. Alcohol dehydrogenase in the liver converts ethanol and NAD+ to acetaldehyde and NADH, while in yeast and some other microorganisms ADH catalyzes the conversion acetaldehyde to ethanol in alcoholic fermentation. ADH is a member of the medium chain alcohol dehydrogenase family (MDR), which have a NAD(P)(H)-binding domain in a Rossmann fold of a beta-alpha form. The NAD(H)-binding region is comprised of 2 structurally similar halves, each of which contacts a mononucleotide. A GxGxxG motif after the first mononucleotide contact half allows the close contact of the coenzyme with the ADH backbone. The N-terminal catalytic domain has a distant homology to GroES. These proteins typically form dimers (typically higher plants, mammals) or tetramers (yeast, bacteria), and have 2 tightly bound zinc atoms per subunit, a catalytic zinc at the active site and a structural zinc in a lobe of the catalytic domain. NAD(H)-binding occurs in the cleft between the catalytic and coenzyme-binding domains at the active site, and coenzyme binding induces a conformational closing of this cleft. Coenzyme binding typically precedes and contributes to substrate binding. In human ADH catalysis, the zinc ion helps coordinate the alcohol, followed by deprotonation of a histidine (His-51), the ribose of NAD, a serine (Ser-48), then the alcohol, which allows the transfer of a hydride to NAD+, creating NADH and a zinc-bound aldehyde or ketone. In yeast and some bacteria, the active site zinc binds an aldehyde, polarizing it, and leading to the reverse reaction. Length = 332

>gnl|CDD|223991 COG1063, Tdh, Threonine dehydrogenase and related Zn-dependent dehydrogenases [Amino acid transport and metabolism / General function prediction only]

 Score =  141 bits (358), Expect = 4e-39
 Identities = 82/301 (27%), Positives = 128/301 (42%), Gaps = 19/301 (6%)

Query: 36  GEKDVTFKVTHCGICHSDLHMIK-NEWGNTIYPIVPGHEIVGVVTEVGSKVSKFKVGDKV 94
           G  DV  +VT  GIC SDLH+ +  E       I+ GHE VG V EVG  V  FKVGD+V
Sbjct: 24  GPGDVLIRVTATGICGSDLHIYRGGEPFVPPGDIILGHEFVGEVVEVGV-VRGFKVGDRV 82

Query: 95  GVGCMVGSCRSCDSCAIDLENYCPKVIMTYANKYHDGTITYGGYSD-IMVADEHFVVRIP 153
            V   +  C  C  C     N C      +      G    GG+++ + V  +  + ++P
Sbjct: 83  VVEPNI-PCGHCRYCRAGEYNLCEN--PGFYGYAGLGGGIDGGFAEYVRVPADFNLAKLP 139

Query: 154 EGTPLDATA--PLLCAGITVYSPLRFYGLDKPGMHVGVVGLGGLGHVAVKFAKAMGV-KV 210
           +G   +A A    L      ++        +PG  V VVG G +G +A+  AK +G   V
Sbjct: 140 DGIDEEAAALTEPLATAYHGHA---ERAAVRPGGTVVVVGAGPIGLLAIALAKLLGASVV 196

Query: 211 TVISTSPSKKSEAIERLGADSFLVSRDQDEMQAAMGTMDG-----IIDTVSAVHPLMPLI 265
            V+  SP +   A E  GAD  +   + D     +    G     +I+ V +   L   +
Sbjct: 197 IVVDRSPERLELAKEAGGADVVVNPSEDDAGAEILELTGGRGADVVIEAVGSPPALDQAL 256

Query: 266 GLLKSQGKLVLVGAPEKPLELPAFSLLMGRK--IVGGSMIGGMKETQEMIDFAAKHNIRA 323
             L+  G +V+VG            L++ ++  + G     G ++ +  +D  A   I  
Sbjct: 257 EALRPGGTVVVVGVYGGEDIPLPAGLVVSKELTLRGSLRPSGREDFERALDLLASGKIDP 316

Query: 324 D 324
           +
Sbjct: 317 E 317

Length = 350

>gnl|CDD|176240 cd08279, Zn_ADH_class_III, Class III alcohol dehydrogenase

 Score =  139 bits (353), Expect = 3e-38
 Identities = 82/291 (28%), Positives = 126/291 (43%), Gaps = 24/291 (8%)

Query: 36  GEKDVTFKVTHCGICHSDLHMIKNEWGNTIYPIVPGHEIVGVVTEVGSKVSKFKVGDKVG 95
           G  +V  ++   G+CHSDLH++  +      P V GHE  GVV EVG  V+  K GD V 
Sbjct: 24  GPGEVLVRIAAAGLCHSDLHVVTGDLPAP-LPAVLGHEGAGVVEEVGPGVTGVKPGDHV- 81

Query: 96  VGCMVGSCRSCDSCAIDLENYCPKVIMTYANKYHDGT-------------ITYGGYSDIM 142
           V   + +C +C  C+    N C         +  DGT                G +++  
Sbjct: 82  VLSWIPACGTCRYCSRGQPNLCDLGAGILGGQLPDGTRRFTADGEPVGAMCGLGTFAEYT 141

Query: 143 VADEHFVVRIPEGTPLDATAPLLCAGITVYSPLRFYGLDKPGMHVGVVGLGGLGHVAVKF 202
           V  E  VV+I +  PLD  A L C   T    +      +PG  V V+G GG+G  A++ 
Sbjct: 142 VVPEASVVKIDDDIPLDRAALLGCGVTTGVGAVVNTARVRPGDTVAVIGCGGVGLNAIQG 201

Query: 203 AKAMGV-KVTVISTSPSKKSEAIERLGADSFLVSRDQDEMQAAMGTMDGI-----IDTVS 256
           A+  G  ++  +   P K   A  R GA   + + + D ++A     DG       + V 
Sbjct: 202 ARIAGASRIIAVDPVPEKLELAR-RFGATHTVNASEDDAVEAVRDLTDGRGADYAFEAVG 260

Query: 257 AVHPLMPLIGLLKSQGKLVLVG--APEKPLELPAFSLLMGRKIVGGSMIGG 305
               +   + + +  G  V+VG   P + + LPA  L +  K + GS+ G 
Sbjct: 261 RAATIRQALAMTRKGGTAVVVGMGPPGETVSLPALELFLSEKRLQGSLYGS 311

Glutathione-dependent formaldehyde dehydrogenases (FDHs, Class III ADH) are members of the zinc-dependent/medium chain alcohol dehydrogenase family. FDH converts formaldehyde and NAD(P) to formate and NAD(P)H. The initial step in this process the spontaneous formation of a S-(hydroxymethyl)glutathione adduct from formaldehyde and glutathione, followed by FDH-mediated oxidation (and detoxification) of the adduct to S-formylglutathione. NAD(P)(H)-dependent oxidoreductases are the major enzymes in the interconversion of alcohols and aldehydes or ketones. Alcohol dehydrogenase in the liver converts ethanol and NAD+ to acetaldehyde and NADH, while in yeast and some other microorganisms ADH catalyzes the conversion acetaldehyde to ethanol in alcoholic fermentation. Class III ADH are also known as glutathione-dependent formaldehyde dehydrogenase (FDH), which convert aldehydes to corresponding carboxylic acid and alcohol. ADH is a member of the medium chain alcohol dehydrogenase family (MDR), which has a NAD(P)(H)-binding domain in a Rossmann fold of an beta-alpha form. The NAD(H)-binding region is comprised of 2 structurally similar halves, each of which contacts a mononucleotide. A GxGxxG motif after the first mononucleotide contact half allows the close contact of the coenzyme with the ADH backbone. The N-terminal catalytic domain has a distant homology to GroES. These proteins typically form dimers (typically higher plants, mammals) or tetramers (yeast, bacteria), and have 2 tightly bound zinc atoms per subunit, a catalytic zinc at the active site and a structural zinc in a lobe of the catalytic domain. NAD(H) binding occurs in the cleft between the catalytic and coenzyme-binding domains at the active site, and coenzyme binding induces a conformational closing of this cleft. Coenzyme binding typically precedes and contributes to substrate binding. Length = 363

>gnl|CDD|223990 COG1062, AdhC, Zn-dependent alcohol dehydrogenases, class III [Energy production and conversion]

 Score =  137 bits (347), Expect = 3e-37
 Identities = 82/335 (24%), Positives = 135/335 (40%), Gaps = 32/335 (9%)

Query: 39  DVTFKVTHCGICHSDLHMIKNEWGNTIYPIVPGHEIVGVVTEVGSKVSKFKVGDKVGVGC 98
           +V  ++T  G+CH+D H +  +     +P V GHE  G+V  VG  V+  K GD V +  
Sbjct: 29  EVLVRITATGVCHTDAHTLSGDD-PEGFPAVLGHEGAGIVEAVGEGVTSVKPGDHV-ILL 86

Query: 99  MVGSCRSCDSCAIDLENYCPKVIMT-YANKYHDGTITY-------------GGYSDIMVA 144
               C  C  C     N C  +  T       DGT                  +++  V 
Sbjct: 87  FTPECGQCKFCLSGKPNLCEAIRATQGKGTMPDGTTRLSGNGVPVYHYLGCSTFAEYTVV 146

Query: 145 DEHFVVRIPEGTPLDATAPLLCAGITVYSPLRFYGLDKPGMHVGVVGLGGLGHVAVKFAK 204
            E  +V+I    PL+    L C   T    +      +PG  V V GLGG+G  A++ AK
Sbjct: 147 HEISLVKIDPDAPLEKACLLGCGVTTGIGAVVNTAKVEPGDTVAVFGLGGVGLAAIQGAK 206

Query: 205 AMG-VKVTVISTSPSKKSEAIERLGADSFLVSRDQDEMQAAM-----GTMDGIIDTVSAV 258
           A G  ++  +  +P K   A ++ GA  F+  ++ D++  A+     G  D   + V  V
Sbjct: 207 AAGAGRIIAVDINPEKLELA-KKFGATHFVNPKEVDDVVEAIVELTDGGADYAFECVGNV 265

Query: 259 HPLMPLIGLLKSQGKLVLVGAPE--KPLELPAFSLLMGRKIVGGSMIGGMK---ETQEMI 313
             +   +      G  V++G     + +    F L+ GR    GS  GG +   +   ++
Sbjct: 266 EVMRQALEATHRGGTSVIIGVAGAGQEISTRPFQLVTGRVWK-GSAFGGARPRSDIPRLV 324

Query: 314 DFAAKHNIRAD---IEVIPADYVNTALERLAKADV 345
           D      +  D      IP + +N A + + +   
Sbjct: 325 DLYMAGKLPLDRLVTHTIPLEDINEAFDLMHEGKS 359

Length = 366

>gnl|CDD|181842 PRK09422, PRK09422, ethanol-active dehydrogenase/acetaldehyde-active reductase; Provisional

 Score =  136 bits (344), Expect = 3e-37
 Identities = 90/317 (28%), Positives = 162/317 (51%), Gaps = 19/317 (5%)

Query: 43  KVTHCGICHSDLHMIKNEWGNTIYPIVPGHEIVGVVTEVGSKVSKFKVGDKVGVGCMVGS 102
           K+ +CG+CH+DLH+   ++G+    I+ GHE +G+V EVG  V+  KVGD+V +      
Sbjct: 31  KMEYCGVCHTDLHVANGDFGDKTGRIL-GHEGIGIVKEVGPGVTSLKVGDRVSIAWFFEG 89

Query: 103 CRSCDSCAIDLENYCPKVIMTYANKYHDGTITYGGYSD--IMVADEHFVVRIPEGTPLDA 160
           C  C+ C    E  C  V        + G    GG ++  I+ AD  + V++PEG     
Sbjct: 90  CGHCEYCTTGRETLCRSVK-------NAGYTVDGGMAEQCIVTAD--YAVKVPEGLDPAQ 140

Query: 161 TAPLLCAGITVYSPLRFYGLDKPGMHVGVVGLGGLGHVAVKFAK-AMGVKVTVISTSPSK 219
            + + CAG+T Y  ++  G+ KPG  + + G GGLG++A+++AK     KV  +  +  K
Sbjct: 141 ASSITCAGVTTYKAIKVSGI-KPGQWIAIYGAGGLGNLALQYAKNVFNAKVIAVDINDDK 199

Query: 220 KSEAIERLGADSFLVSRDQD----EMQAAMGTMDGIIDTVSAVHPLMPLIGLLKSQGKLV 275
            + A E +GAD  + S+  +     +Q   G     + T  A       +  +++ G++V
Sbjct: 200 LALAKE-VGADLTINSKRVEDVAKIIQEKTGGAHAAVVTAVAKAAFNQAVDAVRAGGRVV 258

Query: 276 LVGAPEKPLELPAFSLLMGRKIVGGSMIGGMKETQEMIDFAAKHNIRADIEVIPADYVNT 335
            VG P + ++L    L++    V GS++G  ++ +E   F A+  +   +++ P + +N 
Sbjct: 259 AVGLPPESMDLSIPRLVLDGIEVVGSLVGTRQDLEEAFQFGAEGKVVPKVQLRPLEDIND 318

Query: 336 ALERLAKADVRYRFVID 352
             + + +  ++ R VID
Sbjct: 319 IFDEMEQGKIQGRMVID 335

Length = 338

>gnl|CDD|184316 PRK13771, PRK13771, putative alcohol dehydrogenase; Provisional

 Score =  126 bits (318), Expect = 2e-33
 Identities = 87/323 (26%), Positives = 148/323 (45%), Gaps = 20/323 (6%)

Query: 36  GEKDVTFKVTHCGICHSDLHMIKNEWGNTIYPIVPGHEIVGVVTEVGSKVSKFKVGDKVG 95
           G+ +V  KV + G+C+ DL  ++  +    YP++ GHE+VG V EVG  V  FK GD+V 
Sbjct: 24  GKDEVVIKVNYAGLCYRDLLQLQGFYPRMKYPVILGHEVVGTVEEVGENVKGFKPGDRV- 82

Query: 96  VGCMVGSCRSCDSCAIDLENYCPKVIMTYANKYHDGTITYGGYSDIMVADEHFVVRIPEG 155
              +     +C+ C    E YC        N+   G    G +++        +V++P  
Sbjct: 83  ASLLYAPDGTCEYCRSGEEAYCK-------NRLGYGEELDGFFAEYAKVKVTSLVKVPPN 135

Query: 156 TPLDATAPLLCAGITVYSPLRFYGLDKPGMHVGVVGL-GGLGHVAVKFAKAMGVKVTVIS 214
              +    + C    VY  LR  G+ K G  V V G  GG+G  A++ AKA+G KV  ++
Sbjct: 136 VSDEGAVIVPCVTGMVYRGLRRAGV-KKGETVLVTGAGGGVGIHAIQVAKALGAKVIAVT 194

Query: 215 TSPSKKSEAIERLGADSFLVSRDQDEMQAAMGTMDGIIDTVSAVHPLMPLIGLLKSQGKL 274
           +S SK  + + +  AD  +V     E    +G  D +I+TV     L   +  L   GK+
Sbjct: 195 SSESKA-KIVSKY-ADYVIVGSKFSEEVKKIGGADIVIETV-GTPTLEESLRSLNMGGKI 251

Query: 275 VLVG----APEKPLELPAFSLLMGRKIVGGSMIGGMKETQEMIDFAAKHNIRADIEV-IP 329
           + +G    +P   L L  + +L   +I+ G +    ++ +E +   A+  I+  I   + 
Sbjct: 252 IQIGNVDPSPTYSLRL-GYIILKDIEII-GHISATKRDVEEALKLVAEGKIKPVIGAEVS 309

Query: 330 ADYVNTALERLAKADVRYRFVID 352
              ++ ALE L       + ++ 
Sbjct: 310 LSEIDKALEELKDKSRIGKILVK 332

Length = 334

>gnl|CDD|176224 cd08263, Zn_ADH10, Alcohol dehydrogenases of the MDR family

 Score =  126 bits (319), Expect = 2e-33
 Identities = 97/349 (27%), Positives = 154/349 (44%), Gaps = 37/349 (10%)

Query: 36  GEKDVTFKVTHCGICHSDLHMIKNEWGNTIYPI--VPGHEIVGVVTEVGSKV---SKFKV 90
            E ++  +V  CG+CHSDLH++K E     +P   V GHEI G V EVG  V       V
Sbjct: 24  KEGEILIRVAACGVCHSDLHVLKGE---LPFPPPFVLGHEISGEVVEVGPNVENPYGLSV 80

Query: 91  GDKVGVGCMVGSCRSCDSCAIDLENYCPKVIMTYANK--YHDGTI-------------TY 135
           GD+V VG  +  C  C  CA   EN C         K   +DGT              + 
Sbjct: 81  GDRV-VGSFIMPCGKCRYCARGKENLCEDFFAYNRLKGTLYDGTTRLFRLDGGPVYMYSM 139

Query: 136 GGYSDIMVADEHFVVRIPEGTPLDATAPLLCAGITVYSPLRFYGLDKPGMHVGVVGLGGL 195
           GG ++  V     +  +PE      +A L CAG T Y  L+     +PG  V V+G+GG+
Sbjct: 140 GGLAEYAVVPATALAPLPESLDYTESAVLGCAGFTAYGALKHAADVRPGETVAVIGVGGV 199

Query: 196 GHVAVKFAKAMGVKVTV-ISTSPSKKSEAIERLGADSFLVSRDQD---EMQAAMGTM--D 249
           G  A++ AKA G    + +     K ++A E LGA   + +  +D    ++   G    D
Sbjct: 200 GSSAIQLAKAFGASPIIAVDVRDEKLAKAKE-LGATHTVNAAKEDAVAAIREITGGRGVD 258

Query: 250 GIIDTVSAVHPLMPLIGLLKSQGKLVLVG--APEKPLELPAFSLLM-GRKIVGGSMIGGM 306
            +++ +         + +++  G+ V+VG        E+P   L+  G KI+G       
Sbjct: 259 VVVEALGKPETFKLALDVVRDGGRAVVVGLAPGGATAEIPITRLVRRGIKIIGSYGARPR 318

Query: 307 KETQEMIDFAAKHNIRADIEV---IPADYVNTALERLAKADVRYRFVID 352
           ++  E++  AA   +  +  V      + +N A E L K  +  R +++
Sbjct: 319 QDLPELVGLAASGKLDPEALVTHKYKLEEINEAYENLRKGLIHGRAIVE 367

NAD(P)(H)-dependent oxidoreductases are the major enzymes in the interconversion of alcohols and aldehydes, or ketones. Alcohol dehydrogenase in the liver converts ethanol and NAD+ to acetaldehyde and NADH, while in yeast and some other microorganisms ADH catalyzes the conversion acetaldehyde to ethanol in alcoholic fermentation. ADH is a member of the medium chain alcohol dehydrogenase family (MDR), which have a NAD(P)(H)-binding domain in a Rossmann fold of a beta-alpha form. The NAD(H)-binding region is comprised of 2 structurally similar halves, each of which contacts a mononucleotide. A GxGxxG motif after the first mononucleotide contact half allows the close contact of the coenzyme with the ADH backbone. The N-terminal catalytic domain has a distant homology to GroES. These proteins typically form dimers (typically higher plants, mammals) or tetramers (yeast, bacteria), and have 2 tightly bound zinc atoms per subunit, a catalytic zinc at the active site and a structural zinc in a lobe of the catalytic domain. NAD(H)-binding occurs in the cleft between the catalytic and coenzyme-binding domains at the active site, and coenzyme binding induces a conformational closing of this cleft. Coenzyme binding typically precedes and contributes to substrate binding. In human ADH catalysis, the zinc ion helps coordinate the alcohol, followed by deprotonation of a histidine, the ribose of NAD, a serine, then the alcohol, which allows the transfer of a hydride to NAD+, creating NADH and a zinc-bound aldehyde or ketone. In yeast and some bacteria, the active site zinc binds an aldehyde, polarizing it, and leading to the reverse reaction. Length = 367

>gnl|CDD|176198 cd08236, sugar_DH, NAD(P)-dependent sugar dehydrogenases

 Score =  125 bits (317), Expect = 4e-33
 Identities = 68/273 (24%), Positives = 114/273 (41%), Gaps = 30/273 (10%)

Query: 36  GEKDVTFKVTHCGICHSDLHMIKNEWGNTIYPIVPGHEIVGVVTEVGSKVSKFKVGDKVG 95
           G  +V  KV  CGIC SD+            P+V GHE  G V EVGS V    VGD+V 
Sbjct: 23  GPGEVLVKVKACGICGSDIPRYLGTG-AYHPPLVLGHEFSGTVEEVGSGVDDLAVGDRVA 81

Query: 96  VGCMVGSCRSCDSCAIDLENYCPKVIMTYANKYHDGTITYGGYSDIMVADEHFVVRIPEG 155
           V  ++  C  C+ C     + C        ++        G +++ +      +++IP+ 
Sbjct: 82  VNPLL-PCGKCEYCKKGEYSLCSNYDY-IGSRRD------GAFAEYVSVPARNLIKIPDH 133

Query: 156 TPLDATA---PLLCAGITVY-SPLRFYGLDKPGMHVGVVGLGGLGHVAVKFAKAMGVK-V 210
              +  A   P   A   V  + +        G  V V+G G +G +A+++ K +G K V
Sbjct: 134 VDYEEAAMIEPAAVALHAVRLAGI------TLGDTVVVIGAGTIGLLAIQWLKILGAKRV 187

Query: 211 TVISTSPSKKSEAIERLGADSFLVSRDQDEMQAAMGTMDG-----IIDTVSAVHPLMPLI 265
             +     +K      LGAD  +  +++D  +      +G     +I+   +   +   +
Sbjct: 188 IAVDID-DEKLAVARELGADDTINPKEEDV-EKVRELTEGRGADLVIEAAGSPATIEQAL 245

Query: 266 GLLKSQGKLVLVGAPEKPLELPAFSLLMGRKIV 298
            L +  GK+VLVG P   + L   +     KI+
Sbjct: 246 ALARPGGKVVLVGIPYGDVTLSEEAF---EKIL 275

This group contains proteins identified as sorbitol dehydrogenases and other sugar dehydrogenases of the medium-chain dehydrogenase/reductase family (MDR), which includes zinc-dependent alcohol dehydrogenase and related proteins. Sorbitol and aldose reductase are NAD(+) binding proteins of the polyol pathway, which interconverts glucose and fructose. Sorbitol dehydrogenase is tetrameric and has a single catalytic zinc per subunit. NAD(P)(H)-dependent oxidoreductases are the major enzymes in the interconversion of alcohols and aldehydes, or ketones. Related proteins include threonine dehydrogenase, formaldehyde dehydrogenase, and butanediol dehydrogenase. The medium chain alcohol dehydrogenase family (MDR) has a NAD(P)(H)-binding domain in a Rossmann fold of a beta-alpha form. The N-terminal region typically has an all-beta catalytic domain. These proteins typically form dimers (typically higher plants, mammals) or tetramers (yeast, bacteria), and have 2 tightly bound zinc atoms per subunit. Horse liver alcohol dehydrogenase is a dimeric enzyme and each subunit has two domains. The NAD binding domain is in a Rossmann fold and the catalytic domain contains a zinc ion to which substrates bind. There is a cleft between the domains that closes upon formation of the ternary complex. Length = 343

>gnl|CDD|223677 COG0604, Qor, NADPH:quinone reductase and related Zn-dependent oxidoreductases [Energy production and conversion / General function prediction only]

 Score =  123 bits (310), Expect = 2e-32
 Identities = 91/335 (27%), Positives = 138/335 (41%), Gaps = 51/335 (15%)

Query: 36  GEKDVTFKVTHCGICHSDLHMIKNEWGNTI-YPIVPGHEIVGVVTEVGSKVSKFKVGDKV 94
           G  +V  +V   G+   D+ + +         P +PG E  GVV  VGS V+ FKVGD+V
Sbjct: 26  GPGEVLVRVKAAGVNPIDVLVRQGLAPPVRPLPFIPGSEAAGVVVAVGSGVTGFKVGDRV 85

Query: 95  GVGCMVGSCRSCDSCAIDLENYCPKVIMTYANKYHDGTITYGGYSDIMVADEHFVVRIPE 154
                VG                                  GGY++ +V    ++V +P+
Sbjct: 86  AALGGVGR--------------------------------DGGYAEYVVVPADWLVPLPD 113

Query: 155 GTPLDATAPLLCAGITVYSPLRFYGLDKPGMHVGVVG-LGGLGHVAVKFAKAMGVKVTVI 213
           G   +  A L  AG+T +  L      KPG  V V G  GG+G  A++ AKA+G  V V 
Sbjct: 114 GLSFEEAAALPLAGLTAWLALFDRAGLKPGETVLVHGAAGGVGSAAIQLAKALGATV-VA 172

Query: 214 STSPSKKSEAIERLGADSFLVSRDQDEMQAAMGTM-----DGIIDTVSAVHPLMPLIGLL 268
             S S+K E ++ LGAD  +  R++D ++           D ++DTV         +  L
Sbjct: 173 VVSSSEKLELLKELGADHVINYREEDFVEQVRELTGGKGVDVVLDTVGG-DTFAASLAAL 231

Query: 269 KSQGKLVLVGAPEK--PLELPAFSLLMGRKIVGGSMIGGM------KETQEMIDFAAKHN 320
              G+LV +GA     P+ L    LL  R  + G  +G        +   E+ D  A   
Sbjct: 232 APGGRLVSIGALSGGPPVPLNLLPLLGKRLTLRGVTLGSRDPEALAEALAELFDLLASGK 291

Query: 321 IRADI-EVIP-ADYVNTALERLAKADVRYRFVIDV 353
           ++  I  V P A+    A   L +     + V+ V
Sbjct: 292 LKPVIDRVYPLAEAPAAAAHLLLERRTTGKVVLKV 326

Length = 326

>gnl|CDD|176191 cd05289, MDR_like_2, alcohol dehydrogenase and quinone reductase-like medium chain degydrogenases/reductases

 Score =  122 bits (308), Expect = 3e-32
 Identities = 88/325 (27%), Positives = 134/325 (41%), Gaps = 50/325 (15%)

Query: 36  GEKDVTFKVTHCGICHSDLHMIKNEWGNTIY---PIVPGHEIVGVVTEVGSKVSKFKVGD 92
           G  +V  KV   G+   DL + +           P++PGH++ GVV  VG  V+ FKVGD
Sbjct: 26  GPGEVLVKVHAAGVNPVDLKIREGLLKAAFPLTLPLIPGHDVAGVVVAVGPGVTGFKVGD 85

Query: 93  KVGVGCMVGSCRSCDSCAIDLENYCPKVIMTYANKYHDGTITYGGYSDIMVADEHFVVRI 152
           +V  G M    R                               G Y++ +V     +   
Sbjct: 86  EV-FG-MTPFTRG------------------------------GAYAEYVVVPADELALK 113

Query: 153 PEGTPLDATAPLLCAGITVYSPLRFYGLDKPGMHVGVVG-LGGLGHVAVKFAKAMGVKVT 211
           P     +  A L  AG+T +  L   G  K G  V + G  GG+G  AV+ AKA G +  
Sbjct: 114 PANLSFEEAAALPLAGLTAWQALFELGGLKAGQTVLIHGAAGGVGSFAVQLAKARGAR-- 171

Query: 212 VISTSPSKKSEAIERLGADSFLVSRDQD-EMQAAMGTMDGIIDTVSAVHPLMPLIGLLKS 270
           VI+T+ +  ++ +  LGAD  +     D E  AA G +D ++DTV     L   + L+K 
Sbjct: 172 VIATASAANADFLRSLGADEVIDYTKGDFERAAAPGGVDAVLDTVGG-ETLARSLALVKP 230

Query: 271 QGKLV-LVGAPEKPLELPAFSLLMGRKIVGGSMI--GGMKETQEMIDFAAKHNIRADI-E 326
            G+LV + G P      PA      R +  G +      ++  E+ +      +R  +  
Sbjct: 231 GGRLVSIAGPP------PAEQAAKRRGVRAGFVFVEPDGEQLAELAELVEAGKLRPVVDR 284

Query: 327 VIPADYVNTALERLAKADVRYRFVI 351
           V P +    A ERL     R + V+
Sbjct: 285 VFPLEDAAEAHERLESGHARGKVVL 309

Members identified as zinc-dependent alcohol dehydrogenases and quinone oxidoreductase. QOR catalyzes the conversion of a quinone + NAD(P)H to a hydroquinone + NAD(P)+. Quinones are cyclic diones derived from aromatic compounds. Membrane bound QOR actin the respiratory chains of bacteria and mitochondria, while soluble QOR acts to protect from toxic quinones (e.g. DT-diaphorase) or as a soluble eye-lens protein in some vertebrates (e.g. zeta-crystalin). QOR reduces quinones through a semi-quinone intermediate via a NAD(P)H-dependent single electron transfer. QOR is a member of the medium chain dehydrogenase/reductase family, but lacks the zinc-binding sites of the prototypical alcohol dehydrogenases of this group. NAD(P)(H)-dependent oxidoreductases are the major enzymes in the interconversion of alcohols and aldehydes, or ketones. Alcohol dehydrogenase in the liver converts ethanol and NAD+ to acetaldehyde and NADH, while in yeast and some other microorganisms ADH catalyzes the conversion acetaldehyde to ethanol in alcoholic fermentation. ADH is a member of the medium chain alcohol dehydrogenase family (MDR), which has a NAD(P)(H)-binding domain in a Rossmann fold of a beta-alpha form. The NAD(H)-binding region is comprised of 2 structurally similar halves, each of which contacts a mononucleotide. A GxGxxG motif after the first mononucleotide contact half allows the close contact of the coenzyme with the ADH backbone. The N-terminal catalytic domain has a distant homology to GroES. These proteins typically form dimers (typically higher plants, mammals) or tetramers (yeast, bacteria), and have 2 tightly bound zinc atoms per subunit, a catalytic zinc at the active site and a structural zinc in a lobe of the catalytic domain. NAD(H) binding occurs in the cleft between the catalytic and coenzyme-binding domains at the active site, and coenzyme binding induces a conformational closing of this cleft. Coenzyme binding typically precedes and contributes to substrate binding. In human ADH catalysis, the zinc ion helps coordinate the alcohol, followed by deprotonation of a histidine, the ribose of NAD, a serine, then the alcohol, which allows the transfer of a hydride to NAD+, creating NADH and a zinc-bound aldehyde or ketone. In yeast and some bacteria, the active site zinc binds an aldehyde, polarizing it, and leading to the reverse reaction. Length = 309

>gnl|CDD|176195 cd08233, butanediol_DH_like, (2R,3R)-2,3-butanediol dehydrogenase

 Score =  121 bits (307), Expect = 1e-31
 Identities = 96/316 (30%), Positives = 138/316 (43%), Gaps = 43/316 (13%)

Query: 34  ATGEKDVTFKVTHCGICHSDLH-------MIKNEWGNTIY-----PIVPGHEIVGVVTEV 81
                +V  KV  CGIC SDLH        I  E G+        P+  GHE  GVV EV
Sbjct: 21  PVKPGEVKIKVAWCGICGSDLHEYLDGPIFIPTE-GHPHLTGETAPVTLGHEFSGVVVEV 79

Query: 82  GSKVSKFKVGDKVGVGCMVGSCRSCDSCAIDLENYCPKVIMTYANKYHDGTI----TYGG 137
           GS V+ FKVGD+V V      C +C +C   L N C  +          G I      GG
Sbjct: 80  GSGVTGFKVGDRVVVEPT-IKCGTCGACKRGLYNLCDSL----------GFIGLGGGGGG 128

Query: 138 YSDIMVADEHFVVRIPEGTPLDATA---PLLCAGITVYSPLRFYGLDKPGMHVGVVGLGG 194
           +++ +V   + V ++P+  PL+  A   PL  A    +  +R  G  KPG    V+G G 
Sbjct: 129 FAEYVVVPAYHVHKLPDNVPLEEAALVEPLAVA----WHAVRRSGF-KPGDTALVLGAGP 183

Query: 195 LGHVAVKFAKAMGV-KVTVISTSPSKKSEAIERLGADSFLVSRDQDEMQAAM-----GTM 248
           +G + +   KA G  K+ V   S +++ E  E LGA   L   + D +         G +
Sbjct: 184 IGLLTILALKAAGASKIIVSEPSEARR-ELAEELGATIVLDPTEVDVVAEVRKLTGGGGV 242

Query: 249 DGIIDTVSAVHPLMPLIGLLKSQGKLVLVGAPEKPLELPAFSLLMGRKIVGGSMIGGMKE 308
           D   D       L   I  L+ +G  V V   EKP+      L++  K + GS+    ++
Sbjct: 243 DVSFDCAGVQATLDTAIDALRPRGTAVNVAIWEKPISFNPNDLVLKEKTLTGSICYTRED 302

Query: 309 TQEMIDFAAKHNIRAD 324
            +E+ID  A   I A+
Sbjct: 303 FEEVIDLLASGKIDAE 318

(2R,3R)-2,3-butanediol dehydrogenase, a zinc-dependent medium chain alcohol dehydrogenase, catalyzes the NAD(+)-dependent oxidation of (2R,3R)-2,3-butanediol and meso-butanediol to acetoin. BDH functions as a homodimer. NAD(P)(H)-dependent oxidoreductases are the major enzymes in the interconversion of alcohols and aldehydes, or ketones. The medium chain alcohol dehydrogenase family (MDR) have a NAD(P)(H)-binding domain in a Rossmann fold of a beta-alpha form. The N-terminal region typically has an all-beta catalytic domain. These proteins typically form dimers (typically higher plants, mammals) or tetramers (yeast, bacteria), and have 2 tightly bound zinc atoms per subunit. Sorbitol and aldose reductase are NAD(+) binding proteins of the polyol pathway, which interconverts glucose and fructose. Sorbitol dehydrogenase is tetrameric and has a single catalytic zinc per subunit. Length = 351

>gnl|CDD|176193 cd08231, MDR_TM0436_like, Hypothetical enzyme TM0436 resembles the zinc-dependent alcohol dehydrogenases (ADH)

 Score =  119 bits (301), Expect = 8e-31
 Identities = 86/334 (25%), Positives = 121/334 (36%), Gaps = 39/334 (11%)

Query: 36  GEKDVTFKVTHCGICHSDLHMIKNEWGNTIYPIVPGHEIVGVVTEVGSKVS------KFK 89
               V  +V   G+C SD+H +         PI+ GHE VG V  +G  V+        K
Sbjct: 24  EPGAVLVRVRLAGVCGSDVHTVAGRRPRVPLPIILGHEGVGRVVALGGGVTTDVAGEPLK 83

Query: 90  VGDKVGVGCMVGSCRSCDSCAIDLENYCPKVIMTYANKYHDGTITYGGYSDIMV--ADEH 147
           VGD+V    +   C  C  C +     C            D     GGY++ +       
Sbjct: 84  VGDRV-TWSVGAPCGRCYRCLVGDPTKCENRKKYGHEASCDDPHLSGGYAEHIYLPPGTA 142

Query: 148 FVVRIPEGTPLDATAPLLCAGITVYSPLRFYGLDKPGMHVGVVGLGGLGHVAVKFAKAMG 207
             VR+P+  P +  AP  CA  TV + L   G    G  V V G G LG  AV  AK  G
Sbjct: 143 I-VRVPDNVPDEVAAPANCALATVLAALDRAGPVGAGDTVVVQGAGPLGLYAVAAAKLAG 201

Query: 208 -VKVTVISTSPSKKSEAIERLGADSFLVSRDQDEMQAAMGTMD--------------GII 252
             +V VI  SP +  E     GAD+ +   +  + Q      D              G  
Sbjct: 202 ARRVIVIDGSPERL-ELAREFGADATIDIDELPDPQRRAIVRDITGGRGADVVIEASGHP 260

Query: 253 DTVSAVHPLMPLIGLLKSQGKLVLVG--APEKPLELPAFSLLMGRKIVGGSMIGGMKETQ 310
             V         + LL+  G  VLVG  AP   + L    ++     + G          
Sbjct: 261 AAVPEG------LELLRRGGTYVLVGSVAPAGTVPLDPERIVRKNLTIIGVHNYDPSHLY 314

Query: 311 EMIDFAAKHNIR---ADI--EVIPADYVNTALER 339
             + F  +   R   A++     P + +N ALE 
Sbjct: 315 RAVRFLERTQDRFPFAELVTHRYPLEDINEALEL 348

This group contains the hypothetical TM0436 alcohol dehydrogenase from Thermotoga maritima, proteins annotated as 5-exo-alcohol dehydrogenase, and other members of the medium chain dehydrogenases/reductase (MDR)/zinc-dependent alcohol dehydrogenase-like family. MDR, which contains the zinc-dependent alcohol dehydrogenase (ADH-Zn) and related proteins, is a diverse group of proteins related to the first identified member, class I mammalian ADH. MDRs display a broad range of activities and are distinguished from the smaller short chain dehydrogenases (~ 250 amino acids vs. the ~ 350 amino acids of the MDR). The MDR proteins have 2 domains: a C-terminal NAD(P) binding-Rossmann fold domain of a beta-alpha form and an N-terminal catalytic domain with distant homology to GroES. The MDR group contains a host of activities, including the founding alcohol dehydrogenase (ADH), quinone reductase, sorbitol dehydrogenase, formaldehyde dehydrogenase, butanediol DH, ketose reductase, cinnamyl reductase, and numerous others. The zinc-dependent alcohol dehydrogenases (ADHs) catalyze the NAD(P)(H)-dependent interconversion of alcohols to aldehydes or ketones. Active site zinc has a catalytic role, while structural zinc aids in stability. Length = 361

>gnl|CDD|219758 pfam08240, ADH_N, Alcohol dehydrogenase GroES-like domain

 Score =  112 bits (282), Expect = 1e-30
 Identities = 39/116 (33%), Positives = 57/116 (49%), Gaps = 8/116 (6%)

Query: 37  EKDVTFKVTHCGICHSDLHMIKNEWGNTIYPIVPGHEIVGVVTEVGSKVSKFKVGDKVGV 96
             +V  +V   GIC SDLH+ + E      P++ GHE  G+V EVG  V+  KVGD+V V
Sbjct: 1   PGEVLVRVKAAGICGSDLHIYRGEPPPVKLPLILGHEGAGIVEEVGPGVTGLKVGDRVVV 60

Query: 97  GCMVGSCRSCDSCAIDLENYCPKVIMTYANKYHDGTITYGGYSDIMVADEHFVVRI 152
             ++  C  C +C    EN CP       N    G    GG+++ +V     +V +
Sbjct: 61  YPLI-PCGKCAACREGRENLCP-------NGKFLGVHLDGGFAEYVVVPARNLVPL 108

This is the catalytic domain of alcohol dehydrogenases. Many of them contain an inserted zinc binding domain. This domain has a GroES-like structure. Length = 108

>gnl|CDD|176221 cd08260, Zn_ADH6, Alcohol dehydrogenases of the MDR family

 Score =  118 bits (299), Expect = 1e-30
 Identities = 72/250 (28%), Positives = 109/250 (43%), Gaps = 16/250 (6%)

Query: 36  GEKDVTFKVTHCGICHSDLHMIKNEWGNTIYPIVPGHEIVGVVTEVGSKVSKFKVGDKVG 95
               V  +V  CG+C SD H  +    +   P VPGHE  GVV EVG  VS+++VGD+V 
Sbjct: 24  PPDGVVVEVEACGVCRSDWHGWQGHDPDVTLPHVPGHEFAGVVVEVGEDVSRWRVGDRVT 83

Query: 96  VGCMVGSCRSCDSCAIDLENYCPKVIMTYANKYHDGTITYGGYSDIMVAD--EHFVVRIP 153
           V   V  C +C  C     N C   +         G    G +++ +     +  +VR+P
Sbjct: 84  VP-FVLGCGTCPYCRAGDSNVCEHQVQP-------GFTHPGSFAEYVAVPRADVNLVRLP 135

Query: 154 EGTPLDATAPLLCAGITVYSPLRFYGLDKPGMHVGVVGLGGLGHVAVKFAKAMGVKVTVI 213
           +       A L C   T +  L      KPG  V V G GG+G  AV  A A+G +V  +
Sbjct: 136 DDVDFVTAAGLGCRFATAFRALVHQARVKPGEWVAVHGCGGVGLSAVMIASALGARVIAV 195

Query: 214 STSPSKKSEAIERLGADSFLVSRDQDEMQAAM-----GTMDGIIDTVSAVHPLMPLIGLL 268
                K   A   LGA + + + + +++ AA+     G     +D +         +  L
Sbjct: 196 DIDDDKLELA-RELGAVATVNASEVEDVAAAVRDLTGGGAHVSVDALGIPETCRNSVASL 254

Query: 269 KSQGKLVLVG 278
           + +G+ V VG
Sbjct: 255 RKRGRHVQVG 264

NAD(P)(H)-dependent oxidoreductases are the major enzymes in the interconversion of alcohols and aldehydes, or ketones. This group has the characteristic catalytic and structural zinc sites of the zinc-dependent alcohol dehydrogenases. Alcohol dehydrogenase in the liver converts ethanol and NAD+ to acetaldehyde and NADH, while in yeast and some other microorganisms ADH catalyzes the conversion acetaldehyde to ethanol in alcoholic fermentation. ADH is a member of the medium chain alcohol dehydrogenase family (MDR), which has a NAD(P)(H)-binding domain in a Rossmann fold of a beta-alpha form. The NAD(H)-binding region is comprised of 2 structurally similar halves, each of which contacts a mononucleotide. A GxGxxG motif after the first mononucleotide contact half allows the close contact of the coenzyme with the ADH backbone. The N-terminal catalytic domain has a distant homology to GroES. These proteins typically form dimers (typically higher plants, mammals) or tetramers (yeast, bacteria), and have 2 tightly bound zinc atoms per subunit, a catalytic zinc at the active site and a structural zinc in a lobe of the catalytic domain. NAD(H)-binding occurs in the cleft between the catalytic and coenzyme-binding domains at the active site, and coenzyme binding induces a conformational closing of this cleft. Coenzyme binding typically precedes and contributes to substrate binding. In human ADH catalysis, the zinc ion helps coordinate the alcohol, followed by deprotonation of a histidine, the ribose of NAD, a serine, then the alcohol, which allows the transfer of a hydride to NAD+, creating NADH and a zinc-bound aldehyde or ketone. In yeast and some bacteria, the active site zinc binds an aldehyde, polarizing it, and leading to the reverse reaction. Length = 345

>gnl|CDD|131869 TIGR02822, adh_fam_2, zinc-binding alcohol dehydrogenase family protein

 Score =  116 bits (291), Expect = 9e-30
 Identities = 88/311 (28%), Positives = 130/311 (41%), Gaps = 23/311 (7%)

Query: 36  GEKDVTFKVTHCGICHSDLHMIKNEWGNTIYPIVPGHEIVGVVTEVGSKVSKFKVGDKVG 95
           G  ++  +V  CG+C +DLH+ + +       + PGHE+VG V   G+    F VGD+VG
Sbjct: 26  GPGELLVRVRACGVCRTDLHVSEGDLPVHRPRVTPGHEVVGEVAGRGADAGGFAVGDRVG 85

Query: 96  VGCMVGSCRSCDSCAIDLENYCPKVIMTYANKYHDGTITYGGYSDIMVADEHFVVRIPEG 155
           +  +  +C  C  C    EN CP      A++Y  G  T GGY++       F  R+P G
Sbjct: 86  IAWLRRTCGVCRYCRRGAENLCP------ASRY-TGWDTDGGYAEYTTVPAAFAYRLPTG 138

Query: 156 TPLDATAPLLCAGITVYSPLRFYGLDKPGMHVGVVGLGGLGHVAVKFAKAMGVKVTVIST 215
                 APLLCAGI  Y  L    L  PG  +G+ G GG  H+  + A A G  V V++ 
Sbjct: 139 YDDVELAPLLCAGIIGYRALLRASL-PPGGRLGLYGFGGSAHLTAQVALAQGATVHVMTR 197

Query: 216 SPSKKSEAIERLGADSFLVSRDQDEMQAAMGTMDGIIDTVSAVHPLMPLIGLLKSQGKLV 275
             + +  A+  LGA S                +D  I    A   + P +  L   G L 
Sbjct: 198 GAAARRLALA-LGAASA-----GGAYDTPPEPLDAAILFAPAGGLVPPALEALDRGGVLA 251

Query: 276 LVG-----APEKPLELPAFSLLMGRKIVGGSMIGGMKETQEMIDFAAKHNIRADIEVIPA 330
           + G      P    +   F     R +   +        +E ++ AA+H +R      P 
Sbjct: 252 VAGIHLTDTPPLNYQRHLFYERQIRSVTSNTRADA----REFLELAAQHGVRVTTHTYPL 307

Query: 331 DYVNTALERLA 341
              + AL  L 
Sbjct: 308 SEADRALRDLK 318

Members of this model form a distinct subset of the larger family of oxidoreductases that includes zinc-binding alcohol dehydrogenases and NADPH:quinone reductases (pfam00107). The gene neighborhood of members of this family is not conserved and it appears that no members are characterized. The sequence of the family includes 6 invariant cysteine residues and one invariant histidine. It appears that no member is characterized [Energy metabolism, Fermentation]. Length = 329

>gnl|CDD|176239 cd08278, benzyl_alcohol_DH, Benzyl alcohol dehydrogenase

 Score =  116 bits (293), Expect = 2e-29
 Identities = 81/286 (28%), Positives = 123/286 (43%), Gaps = 38/286 (13%)

Query: 43  KVTHCGICHSDLHMIKNEWGNTIYPIVPGHEIVGVVTEVGSKVSKFKVGDKVGVGCMVGS 102
           ++   GICH+DL  +++    T  P V GHE  GVV  VGS V+  K GD V +     S
Sbjct: 33  RIVATGICHTDLV-VRDGGLPTPLPAVLGHEGAGVVEAVGSAVTGLKPGDHVVLS--FAS 89

Query: 103 CRSCDSCAIDLENYCPKVI-MTYANKYHDGTITY--GGYSDI-------------MVADE 146
           C  C +C      YC     + ++ +  DG+        + +              V  E
Sbjct: 90  CGECANCLSGHPAYCENFFPLNFSGRRPDGSTPLSLDDGTPVHGHFFGQSSFATYAVVHE 149

Query: 147 HFVVRIPEGTPLDATAPLLC-----AGITVYSPLRFYGLDKPGMHVGVVGLGGLGHVAVK 201
             VV++ +  PL+  APL C     AG  V + L+     +PG  + V G G +G  AV 
Sbjct: 150 RNVVKVDKDVPLELLAPLGCGIQTGAG-AVLNVLK----PRPGSSIAVFGAGAVGLAAVM 204

Query: 202 FAKAMGVK-VTVISTSPSKKSEAIERLGADSFLVSRDQD---EMQAAMGT-MDGIIDTVS 256
            AK  G   +  +    S+   A E LGA   +  +++D    ++   G  +D  +DT  
Sbjct: 205 AAKIAGCTTIIAVDIVDSRLELAKE-LGATHVINPKEEDLVAAIREITGGGVDYALDTTG 263

Query: 257 AVHPLMPLIGLLKSQGKLVLVGAP--EKPLELPAFSLLM-GRKIVG 299
               +   +  L  +G L LVGAP     + L    LL+ G+ I G
Sbjct: 264 VPAVIEQAVDALAPRGTLALVGAPPPGAEVTLDVNDLLVSGKTIRG 309

Benzyl alcohol dehydrogenase is similar to liver alcohol dehydrogenase, but has some amino acid substitutions near the active site, which may determine the enzyme's specificity of oxidizing aromatic substrates. Also known as aryl-alcohol dehydrogenases, they catalyze the conversion of an aromatic alcohol + NAD+ to an aromatic aldehyde + NADH + H+. NAD(P)(H)-dependent oxidoreductases are the major enzymes in the interconversion of alcohols and aldehydes, or ketones. Alcohol dehydrogenase in the liver converts ethanol and NAD+ to acetaldehyde and NADH, while in yeast and some other microorganisms ADH catalyzes the conversion acetaldehyde to ethanol in alcoholic fermentation. ADH is a member of the medium chain alcohol dehydrogenase family (MDR), which has a NAD(P)(H)-binding domain in a Rossmann fold of a beta-alpha form. The NAD(H)-binding region is comprised of 2 structurally similar halves, each of which contacts a mononucleotide. A GxGxxG motif after the first mononucleotide contact half allows the close contact of the coenzyme with the ADH backbone. The N-terminal catalytic domain has a distant homology to GroES. These proteins typically form dimers (typically higher plants, mammals) or tetramers (yeast, bacteria), and have 2 tightly bound zinc atoms per subunit, a catalytic zinc at the active site and a structural zinc in a lobe of the catalytic domain. NAD(H) binding occurs in the cleft between the catalytic and coenzyme-binding domains at the active site, and coenzyme binding induces a conformational closing of this cleft. Coenzyme binding typically precedes and contributes to substrate binding. In human ADH catalysis, the zinc ion helps coordinate the alcohol, followed by deprotonation of a histidine, the ribose of NAD, a serine, then the alcohol, which allows the transfer of a hydride to NAD+, creating NADH and a zinc-bound aldehyde or ketone. In yeast and some bacteria, the active site zinc binds an aldehyde, polarizing it, and leading to the reverse reaction. Length = 365

>gnl|CDD|176197 cd08235, iditol_2_DH_like, L-iditol 2-dehydrogenase

 Score =  114 bits (287), Expect = 6e-29
 Identities = 76/262 (29%), Positives = 117/262 (44%), Gaps = 30/262 (11%)

Query: 36  GEKDVTFKVTHCGICHSDLHMIKNEWGNTIYPIVPGHEIVGVVTEVGSKVSKFKVGDKVG 95
           G  +V  KV  CGIC +D+  I+    +   P + GHEI G + EVG  V+ FKVGD+V 
Sbjct: 23  GPGEVLVKVRACGICGTDVKKIRGGHTDLKPPRILGHEIAGEIVEVGDGVTGFKVGDRVF 82

Query: 96  VGCMVGSCRSCDSCAIDLENYCPKVIMTYANKYHDGTITY-GGYSDIM-VADEHF----V 149
           V   V  C  C  C    EN CP         Y      Y GG+++ + V         V
Sbjct: 83  VAPHVP-CGECHYCLRGNENMCP--------NYKKFGNLYDGGFAEYVRVPAWAVKRGGV 133

Query: 150 VRIPEGTPLDATA---PLLCAGITVYSPLRFYGLDKPGMHVGVVGLGGLGHVAVKFAKAM 206
           +++P+    +  A   PL C      +  R  G+ KPG  V V+G G +G +    AKA 
Sbjct: 134 LKLPDNVSFEEAALVEPLAC----CINAQRKAGI-KPGDTVLVIGAGPIGLLHAMLAKAS 188

Query: 207 G-VKVTVISTSPSKKSEAIERLGADSFLVSRDQDEMQAAMGTMDG-----IIDTVSAVHP 260
           G  KV V   +  +   A ++LGAD  + + ++D ++      DG     +I    +   
Sbjct: 189 GARKVIVSDLNEFRLEFA-KKLGADYTIDAAEEDLVEKVRELTDGRGADVVIVATGSPEA 247

Query: 261 LMPLIGLLKSQGKLVLVGAPEK 282
               + L++  G+++  G   K
Sbjct: 248 QAQALELVRKGGRILFFGGLPK 269

Putative L-iditol 2-dehydrogenase based on annotation of some members in this subgroup. L-iditol 2-dehydrogenase catalyzes the NAD+-dependent conversion of L-iditol to L-sorbose in fructose and mannose metabolism. This enzyme is related to sorbitol dehydrogenase, alcohol dehydrogenase, and other medium chain dehydrogenase/reductases. The zinc-dependent alcohol dehydrogenase (ADH-Zn)-like family of proteins is a diverse group of proteins related to the first identified member, class I mammalian ADH. This group is also called the medium chain dehydrogenases/reductase family (MDR) to highlight its broad range of activities and to distinguish from the smaller short chain dehydrogenases (~ 250 amino acids vs. the ~ 350 amino acids of the MDR). The MDR proteins have 2 domains: a C-terminal NAD(P) binding-Rossmann fold domain of a beta-alpha form and an N-terminal GroES-like catalytic domain. The MDR group contains a host of activities, including the founding alcohol dehydrogenase (ADH), quinone reductase, sorbitol dehydrogenase, formaldehyde dehydrogenase, butanediol DH, ketose reductase, cinnamyl reductase, and numerous others. The zinc-dependent alcohol dehydrogenases (ADHs) catalyze the NAD(P)(H)-dependent interconversion of alcohols to aldehydes or ketones. Active site zinc has a catalytic role, while structural zinc aids in stability. ADH-like proteins typically form dimers (typically higher plants, mammals) or tetramers (yeast, bacteria), and generally have 2 tightly bound zinc atoms per subunit. The active site zinc is coordinated by a histidine, two cysteines, and a water molecule. The second zinc seems to play a structural role, affects subunit interactions, and is typically coordinated by 4 cysteines. Length = 343

>gnl|CDD|176219 cd08258, Zn_ADH4, Alcohol dehydrogenases of the MDR family

 Score =  112 bits (282), Expect = 1e-28
 Identities = 81/277 (29%), Positives = 120/277 (43%), Gaps = 22/277 (7%)

Query: 36  GEKDVTFKVTHCGICHSDLHMIKNEWGNTIYPIVPGHEIVGVVTEVGSKVSKFKVGDKVG 95
           G  +V  KV   GIC SDLH+ K ++     P+V GHE  G + EVG  V  +KVGD+V 
Sbjct: 25  GPGEVLIKVAAAGICGSDLHIYKGDYDPVETPVVLGHEFSGTIVEVGPDVEGWKVGDRVV 84

Query: 96  VGCMVGSCRSCDSCAIDLENYCPKVIMTYANKYHDGTITYGGYSDIMVADEHFVVRIPEG 155
                 +C  C  C     N CP       ++   GT   GG+++ ++  E  +  +PE 
Sbjct: 85  SETTFSTCGRCPYCRRGDYNLCP-------HRKGIGTQADGGFAEYVLVPEESLHELPEN 137

Query: 156 TPLDATA---PLLCAGITVYSPLRFYGLDKPGMHVGVVGLGGLGHVAVKFAKAMGVKVTV 212
             L+A A   PL  A   V          +PG  V V G G +G +A + AK  G  V V
Sbjct: 138 LSLEAAALTEPLAVAVHAVAERSGI----RPGDTVVVFGPGPIGLLAAQVAKLQGATVVV 193

Query: 213 ISTSPSKKSEAI-ERLGADSFLVSRDQDEMQAAMGTMDG-----IIDTVSAVHPLMPLIG 266
           + T   +    + + LGAD+      +D  +      DG     +I+   AV  L   + 
Sbjct: 194 VGTEKDEVRLDVAKELGADAVNGGE-EDLAELVNEITDGDGADVVIECSGAVPALEQALE 252

Query: 267 LLKSQGKLVLVG-APEKPLELPAFSLLMGRKIVGGSM 302
           LL+  G++V VG        +    ++     V GS 
Sbjct: 253 LLRKGGRIVQVGIFGPLAASIDVERIIQKELSVIGSR 289

This group shares the zinc coordination sites of the zinc-dependent alcohol dehydrogenases. The medium chain dehydrogenases/reductase (MDR)/zinc-dependent alcohol dehydrogenase-like family, which contains the zinc-dependent alcohol dehydrogenase (ADH-Zn) and related proteins, is a diverse group of proteins related to the first identified member, class I mammalian ADH. MDRs display a broad range of activities and are distinguished from the smaller short chain dehydrogenases (~ 250 amino acids vs. the ~ 350 amino acids of the MDR). The MDR proteins have 2 domains: a C-terminal NAD(P)-binding Rossmann fold domain of an beta-alpha form and an N-terminal catalytic domain with distant homology to GroES. The MDR group contains a host of activities, including the founding alcohol dehydrogenase (ADH), quinone reductase, sorbitol dehydrogenase, formaldehyde dehydrogenase, butanediol DH, ketose reductase, cinnamyl reductase, and numerous others. The zinc-dependent alcohol dehydrogenases (ADHs) catalyze the NAD(P)(H)-dependent interconversion of alcohols to aldehydes or ketones. Active site zinc has a catalytic role, while structural zinc aids in stability. ADH-like proteins typically form dimers (typically higher plants, mammals) or tetramers (yeast, bacteria), and generally have 2 tightly bound zinc atoms per subunit. The active site zinc is coordinated by a histidine, two cysteines, and a water molecule. The second zinc seems to play a structural role, affects subunit interactions, and is typically coordinated by 4 cysteines. Length = 306

>gnl|CDD|176238 cd08277, liver_alcohol_DH_like, Liver alcohol dehydrogenase

 Score =  113 bits (284), Expect = 2e-28
 Identities = 94/351 (26%), Positives = 148/351 (42%), Gaps = 51/351 (14%)

Query: 38  KDVTFKVTHCGICHSDLHMIKNEWGNTIYPIVPGHEIVGVVTEVGSKVSKFKVGDKVGVG 97
            +V  K+    +CH+D+  I+  +  T++P++ GHE  G+V  VG  V+  K GDKV + 
Sbjct: 28  NEVRIKMLATSVCHTDILAIE-GFKATLFPVILGHEGAGIVESVGEGVTNLKPGDKV-IP 85

Query: 98  CMVGSCRSCDSCAIDLENYCPKVIMTYANKYHDGT--ITYGG-----------YSDIMVA 144
             +G C  C +C     N C K     +    DGT   T  G           +S   V 
Sbjct: 86  LFIGQCGECSNCRSGKTNLCQKYRANESGLMPDGTSRFTCKGKKIYHFLGTSTFSQYTVV 145

Query: 145 DEHFVVRIPEGTPLDATAPLLCAGITVYSPLRFYGLDKPGMHVGVVGLGGLGHVAVKFAK 204
           DE++V +I    PL+    L C   T Y         +PG  V V GLG +G  A+  AK
Sbjct: 146 DENYVAKIDPAAPLEHVCLLGCGFSTGYGAAWNTAKVEPGSTVAVFGLGAVGLSAIMGAK 205

Query: 205 AMGV-KVTVISTSPSKKSEAIERLGADSFLVSRDQD----EMQAAM------------GT 247
             G  ++  +  +  K  +A +  GA  F+  +D D    E+   M            G 
Sbjct: 206 IAGASRIIGVDINEDKFEKA-KEFGATDFINPKDSDKPVSEVIREMTGGGVDYSFECTGN 264

Query: 248 MDGIIDTVSAVHPLMPLIGLLKSQGKLVLVGAPEKP-LELPAFSLLMGRKIVGGSMIGGM 306
            D + + + +              G  V+VG P    L +  F L++GR    GS  GG 
Sbjct: 265 ADLMNEALESTK---------LGWGVSVVVGVPPGAELSIRPFQLILGRT-WKGSFFGGF 314

Query: 307 KETQEMIDFAAKH-NIRADIE-----VIPADYVNTALERLAKADVRYRFVI 351
           K   ++    +K+ N + D++     V+P + +N   + L K+    R VI
Sbjct: 315 KSRSDVPKLVSKYMNKKFDLDELITHVLPFEEINKGFD-LMKSGECIRTVI 364

NAD(P)(H)-dependent oxidoreductases are the major enzymes in the interconversion of alcohols and aldehydes, or ketones. Alcohol dehydrogenase in the liver converts ethanol and NAD+ to acetaldehyde and NADH, while in yeast and some other microorganisms ADH catalyzes the conversion acetaldehyde to ethanol in alcoholic fermentation. There are 7 vertebrate ADH 7 classes, 6 of which have been identified in humans. Class III, glutathione-dependent formaldehyde dehydrogenase, has been identified as the primordial form and exists in diverse species, including plants, micro-organisms, vertebrates, and invertebrates. Class I, typified by liver dehydrogenase, is an evolving form. Gene duplication and functional specialization of ADH into ADH classes and subclasses created numerous forms in vertebrates. For example, the A, B and C (formerly alpha, beta, gamma) human class I subunits have high overall structural similarity, but differ in the substrate binding pocket and therefore in substrate specificity. In human ADH catalysis, the zinc ion helps coordinate the alcohol, followed by deprotonation of a histidine (His-51), the ribose of NAD, a serine (Ser-48) , then the alcohol, which allows the transfer of a hydride to NAD+, creating NADH and a zinc-bound aldehyde or ketone. In yeast and some bacteria, the active site zinc binds an aldehyde, polarizing it, and leading to the reverse reaction. ADH is a member of the medium chain alcohol dehydrogenase family (MDR), which has a NAD(P)(H)-binding domain in a Rossmann fold of an beta-alpha form. The NAD(H)-binding region is comprised of 2 structurally similar halves, each of which contacts a mononucleotide. A GxGxxG motif after the first mononucleotide contact half allows the close contact of the coenzyme with the ADH backbone. The N-terminal catalytic domain has a distant homology to GroES. These proteins typically form dimers (typically higher plants, mammals) or tetramers (yeast, bacteria), and have 2 tightly bound zinc atoms per subunit, a catalytic zinc at the active site and a structural zinc in a lobe of the catalytic domain. NAD(H) binding occurs in the cleft between the catalytic and coenzyme-binding domains at the active site, and coenzyme binding induces a conformational closing of this cleft. Coenzyme binding typically precedes and contributes to substrate binding. Length = 365

>gnl|CDD|176196 cd08234, threonine_DH_like, L-threonine dehydrogenase

 Score =  111 bits (280), Expect = 5e-28
 Identities = 82/267 (30%), Positives = 118/267 (44%), Gaps = 32/267 (11%)

Query: 36  GEKDVTFKVTHCGICHSDLHMIKNEWGNTIYPIVPGHEIVGVVTEVGSKVSKFKVGDKVG 95
           G  +V  KV  CGIC +DLH+ + E+G    P+VPGHE  GVV  VGSKV+ FKVGD+V 
Sbjct: 23  GPDEVLIKVAACGICGTDLHIYEGEFGAA-PPLVPGHEFAGVVVAVGSKVTGFKVGDRVA 81

Query: 96  VGCMVGSCRSCDSCAIDLENYCPKVIMTYANKYHDGTITYGGYSDIMVADEHFVVRIPEG 155
           V   +  C  C  C     N C  +          G    GG+++ +V     V +IP+ 
Sbjct: 82  VDPNI-YCGECFYCRRGRPNLCENLTAV-------GVTRNGGFAEYVVVPAKQVYKIPDN 133

Query: 156 TPLDATA---PLLCAGITVYSPLRFYGLD----KPGMHVGVVGLGGLGHVAVKFAKAMGV 208
              +  A   PL CA          +GLD    KPG  V V G G +G +  +  K  G 
Sbjct: 134 LSFEEAALAEPLSCA---------VHGLDLLGIKPGDSVLVFGAGPIGLLLAQLLKLNGA 184

Query: 209 -KVTVISTSPSKKSEAIERLGADSFLVSRDQDEMQAAMGTMDG---IIDTVSAVHPLMPL 264
            +VTV   +  K  E  ++LGA   +    +D          G   +I+       L   
Sbjct: 185 SRVTVAEPNEEKL-ELAKKLGATETVDPSREDPEAQKEDNPYGFDVVIEATGVPKTLEQA 243

Query: 265 IGLLKSQGKLVL--VGAPEKPLELPAF 289
           I   +  G +++  V AP+  + +  F
Sbjct: 244 IEYARRGGTVLVFGVYAPDARVSISPF 270

L-threonine dehydrogenase (TDH) catalyzes the zinc-dependent formation of 2-amino-3-ketobutyrate from L-threonine, via NAD(H)-dependent oxidation. THD is a member of the zinc-requiring, medium chain NAD(H)-dependent alcohol dehydrogenase family (MDR). MDRs have a NAD(P)(H)-binding domain in a Rossmann fold of a beta-alpha form. NAD(P)(H)-dependent oxidoreductases are the major enzymes in the interconversion of alcohols and aldehydes, or ketones. The N-terminal region typically has an all-beta catalytic domain. These proteins typically form dimers (typically higher plants, mammals) or tetramers (yeast, bacteria), and have 2 tightly bound zinc atoms per subunit. Sorbitol and aldose reductase are NAD(+) binding proteins of the polyol pathway, which interconverts glucose and fructose. Length = 334

>gnl|CDD|176201 cd08239, THR_DH_like, L-threonine dehydrogenase (TDH)-like

 Score =  109 bits (275), Expect = 3e-27
 Identities = 87/303 (28%), Positives = 135/303 (44%), Gaps = 17/303 (5%)

Query: 29  HFSRRATGEKDVTFKVTHCGICHSDLHMIKNEWGNTIYP-IVPGHEIVGVVTEVGSKVSK 87
            F     G  +V  +V   G+C SDLH   +      Y  ++PGHE  GVV  VG  V+ 
Sbjct: 16  EFPVPVPGPGEVLLRVKASGLCGSDLHYYYHGHRAPAYQGVIPGHEPAGVVVAVGPGVTH 75

Query: 88  FKVGDKVGVGCMVGSCRSCDSCAIDLENYCPKVIMTYANKYHDGTITYGGYSDIMVADEH 147
           F+VGD+V V   VG C +C +C       C      Y      G    GG+++ M+  E 
Sbjct: 76  FRVGDRVMVYHYVG-CGACRNCRRGWMQLCTSKRAAY------GWNRDGGHAEYMLVPEK 128

Query: 148 FVVRIPEGTPLDATAPLLCAGITVYSPLRFYGLDKPGMHVGVVGLGGLGHVAVKFAKAMG 207
            ++ +P+       A LLC   T Y  LR  G+      V VVG G +G  A+  A+A+G
Sbjct: 129 TLIPLPDDLSFADGALLLCGIGTAYHALRRVGV-SGRDTVLVVGAGPVGLGALMLARALG 187

Query: 208 V-KVTVISTSPSKKSEAIERLGADSFLVSRDQDEMQAAMGTMDG-----IIDTVSAVHPL 261
              V  +  SP +   A   LGAD F+++  QD++Q       G      I+        
Sbjct: 188 AEDVIGVDPSPERLELAKA-LGAD-FVINSGQDDVQEIRELTSGAGADVAIECSGNTAAR 245

Query: 262 MPLIGLLKSQGKLVLVGAPEKPLELPAFSLLMGRKIVGGSMIGGMKETQEMIDFAAKHNI 321
              +  ++  G+LVLVG   +     +  L+  ++ + GS    + + +E  +F A+H +
Sbjct: 246 RLALEAVRPWGRLVLVGEGGELTIEVSNDLIRKQRTLIGSWYFSVPDMEECAEFLARHKL 305

Query: 322 RAD 324
             D
Sbjct: 306 EVD 308

MDR/AHD-like proteins, including a protein annotated as a threonine dehydrogenase. L-threonine dehydrogenase (TDH) catalyzes the zinc-dependent formation of 2-amino-3-ketobutyrate from L-threonine via NAD(H)-dependent oxidation. The zinc-dependent alcohol dehydrogenases (ADHs) catalyze the NAD(P)(H)-dependent interconversion of alcohols to aldehydes or ketones. Zinc-dependent ADHs are medium chain dehydrogenase/reductase type proteins (MDRs) and have a NAD(P)(H)-binding domain in a Rossmann fold of an beta-alpha form. The N-terminal region typically has an all-beta catalytic domain. In addition to alcohol dehydrogenases, this group includes quinone reductase, sorbitol dehydrogenase, formaldehyde dehydrogenase, butanediol DH, ketose reductase, cinnamyl reductase, and numerous others. These proteins typically form dimers (typically higher plants, mammals) or tetramers (yeast, bacteria), and generally have 2 tightly bound zinc atoms per subunit. The active site zinc is coordinated by a histidine, two cysteines, and a water molecule. The second zinc seems to play a structural role, affects subunit interactions, and is typically coordinated by 4 cysteines. Length = 339

>gnl|CDD|188504 TIGR03989, Rxyl_3153, oxidoreductase, Rxyl_3153 family

 Score =  105 bits (264), Expect = 1e-25
 Identities = 85/296 (28%), Positives = 135/296 (45%), Gaps = 30/296 (10%)

Query: 36  GEKDVTFKVTHCGICHSDLHMIKNEWGNTIYPIVPGHEIVGVVTEVGSKVSKFKVGDKVG 95
              +V  K+   G+CHSD H++  +     YPI+ GHE  GVVT+VG  V+  K GD V 
Sbjct: 25  KAGEVLVKLVASGLCHSDEHLVTGDLPMPRYPILGGHEGAGVVTKVGPGVTGVKPGDHV- 83

Query: 96  VGCMVGSCRSCDSCAIDLENYCPK--VIMTYANKYHDGTITY-------------GGYSD 140
           V   + +C  C  C+  L+N C     ++T  ++  DGT  +             G +S+
Sbjct: 84  VLSFIPACGRCRWCSTGLQNLCDLGAALLT-GSQISDGTYRFHADGQDVGQMCLLGTFSE 142

Query: 141 IMVADEHFVVRIPEGTPLDATAPLLCAGITVYSPLRFYGLDKPGMHVGVVGLGGLGHVAV 200
             V  E  VV+I +  PLD    + C   T +         +PG  V V+G+GG+G  AV
Sbjct: 143 YTVVPEASVVKIDDDIPLDKACLVGCGVPTGWGSAVNIADVRPGDTVVVMGIGGVGINAV 202

Query: 201 KFAKAMGVKVTVISTSPSK-KSEAIERLGADSFLVSRDQDEMQAAM----GTM-DGIIDT 254
           + A   G +  VI+  P + K E   + GA     S + + +Q       G   D  I T
Sbjct: 203 QGAAVAGAR-KVIAVDPVEFKREQALKFGATHAFASME-EAVQLVRELTNGQGADKTIIT 260

Query: 255 VSAVHPLM--PLIGLLKSQGKLVLVG-AP--EKPLELPAFSLLMGRKIVGGSMIGG 305
           V  V        +   +  G++V+ G  P  +  +++  F L + +K + G++ GG
Sbjct: 261 VGEVDGEHIAEALSATRKGGRVVVTGLGPMADVDVKVNLFELTLLQKELQGTLFGG 316

This model describes a clade within the family pfam00107 of zinc-binding dehydrogenases. The family pfam00107 contains class III alcohol dehydrogenases, including enzymes designated S-(hydroxymethyl)glutathione dehydrogenase and NAD/mycothiol-dependent formaldehyde dehydrogenase. Members of the current family occur only in species that contain the very small protein mycofactocin (TIGR03969), a possible cofactor precursor, and radical SAM protein TIGR03962. We name this family for Rxyl_3153, where the lone member of the family co-clusters with these markers in Rubrobacter xylanophilus [Unknown function, Enzymes of unknown specificity]. Length = 369

>gnl|CDD|176182 cd05279, Zn_ADH1, Liver alcohol dehydrogenase and related zinc-dependent alcohol dehydrogenases

 Score =  104 bits (261), Expect = 3e-25
 Identities = 88/356 (24%), Positives = 130/356 (36%), Gaps = 60/356 (16%)

Query: 33  RATGEKDVTFKVTHCGICHSDLHMIKNEWGNTIYPIVPGHEIVGVVTEVGSKVSKFKVGD 92
                 +V  KV   G+CH+DLH+I  +   T  P++ GHE  G+V  +G  V+  K GD
Sbjct: 21  APPKAGEVRIKVVATGVCHTDLHVIDGKL-PTPLPVILGHEGAGIVESIGPGVTTLKPGD 79

Query: 93  KVGVGCMVGSCRSCDSCAIDLENYCPKVIMTY-----------------ANKYHDGTITY 135
           KV +      C  C  C     N C K   T                     +  GT T+
Sbjct: 80  KV-IPLFGPQCGKCKQCLNPRPNLCSKSRGTNGRGLMSDGTSRFTCKGKPIHHFLGTSTF 138

Query: 136 GGYSDIMVADEHFVVRIPEGTPLDATAPLLCAGITVYSPLRFYGLDKPGMHVGVVGLGGL 195
             Y+   V  E  + +I    PL+    + C   T Y          PG    V GLGG+
Sbjct: 139 AEYT---VVSEISLAKIDPDAPLEKVCLIGCGFSTGYGAAVNTAKVTPGSTCAVFGLGGV 195

Query: 196 GHVAVKFAKAMGV-KVTVISTSPSKKSEAIERLGADSFLVSRDQD--------EMQA--- 243
           G   +   KA G  ++  +  +  K  +A + LGA   +  RDQD        EM     
Sbjct: 196 GLSVIMGCKAAGASRIIAVDINKDKFEKAKQ-LGATECINPRDQDKPIVEVLTEMTDGGV 254

Query: 244 -----AMGTMDGIIDTVSAVHPLMPLIGLLKSQGKLVLVGAPE--KPLELPAFSLLMGRK 296
                 +G+ D +   + A              G  V+VG P       L    LL GR 
Sbjct: 255 DYAFEVIGSADTLKQALDATR---------LGGGTSVVVGVPPSGTEATLDPNDLLTGRT 305

Query: 297 IVGGSMIGGMKETQEMI----DFAAKHNIRAD---IEVIPADYVNTALERLAKADV 345
           I  G++ GG K    +      +  K     D     V+P + +N   + +   + 
Sbjct: 306 IK-GTVFGGWKSKDSVPKLVALYRQK-KFPLDELITHVLPFEEINDGFDLMRSGES 359

NAD(P)(H)-dependent oxidoreductases are the major enzymes in the interconversion of alcohols and aldehydes, or ketones. Alcohol dehydrogenase in the liver converts ethanol and NAD+ to acetaldehyde and NADH, while in yeast and some other microorganisms ADH catalyzes the conversion acetaldehyde to ethanol in alcoholic fermentation. There are 7 vertebrate ADH 7 classes, 6 of which have been identified in humans. Class III, glutathione-dependent formaldehyde dehydrogenase, has been identified as the primordial form and exists in diverse species, including plants, micro-organisms, vertebrates, and invertebrates. Class I, typified by liver dehydrogenase, is an evolving form. Gene duplication and functional specialization of ADH into ADH classes and subclasses created numerous forms in vertebrates. For example, the A, B and C (formerly alpha, beta, gamma) human class I subunits have high overall structural similarity, but differ in the substrate binding pocket and therefore in substrate specificity. In human ADH catalysis, the zinc ion helps coordinate the alcohol, followed by deprotonation of a histidine (His-51), the ribose of NAD, a serine (Ser-48), then the alcohol, which allows the transfer of a hydride to NAD+, creating NADH and a zinc-bound aldehyde or ketone. In yeast and some bacteria, the active site zinc binds an aldehyde, polarizing it, and leading to the reverse reaction. ADH is a member of the medium chain alcohol dehydrogenase family (MDR), which has a NAD(P)(H)-binding domain in a Rossmann fold of an beta-alpha form. The NAD(H)-binding region is comprised of 2 structurally similar halves, each of which contacts a mononucleotide. A GxGxxG motif after the first mononucleotide contact half allows the close contact of the coenzyme with the ADH backbone. The N-terminal catalytic domain has a distant homology to GroES. These proteins typically form dimers (typically higher plants, mammals) or tetramers (yeast, bacteria), and have 2 tightly bound zinc atoms per subunit, a catalytic zinc at the active site and a structural zinc in a lobe of the catalytic domain. NAD(H) binding occurs in the cleft between the catalytic and coenzyme-binding domains at the active site, and coenzyme binding induces a conformational closing of this cleft. Coenzyme binding typically precedes and contributes to substrate binding. Length = 365

>gnl|CDD|176241 cd08281, liver_ADH_like1, Zinc-dependent alcohol dehydrogenases (ADH) and class III ADG (AKA formaldehyde dehydrogenase)

 Score =  103 bits (260), Expect = 5e-25
 Identities = 96/365 (26%), Positives = 150/365 (41%), Gaps = 39/365 (10%)

Query: 17  AAKDTSGVLSPFHFSR---------RATGEKDVTFKVTHCGICHSDLHMIKNEWGNTIYP 67
           A    +G  +P+  SR            G  +V  K+   G+CHSDL +I  +    + P
Sbjct: 4   AVLRETGAPTPYADSRPLVIEEVELDPPGPGEVLVKIAAAGLCHSDLSVINGDRPRPL-P 62

Query: 68  IVPGHEIVGVVTEVGSKVSKFKVGDKVGVGCMVGSCRSCDSCAIDLENYCPKVIMTYAN- 126
           +  GHE  GVV EVG  V+  +VGD V V   V SC  C  CA      C          
Sbjct: 63  MALGHEAAGVVVEVGEGVTDLEVGDHV-VLVFVPSCGHCRPCAEGRPALCEPGAAANGAG 121

Query: 127 ---------KYHDGTITY----GGYSDIMVADEHFVVRIPEGTPLDATAPLLCAGITVYS 173
                    +   G I +      +++  V     VV+I +  PL+  A   CA +T   
Sbjct: 122 TLLSGGRRLRLRGGEINHHLGVSAFAEYAVVSRRSVVKIDKDVPLEIAALFGCAVLTGVG 181

Query: 174 PLRFYGLDKPGMHVGVVGLGGLGHVAVKFAKAMGV-KVTVISTSPSKKSEAIERLGADSF 232
            +      +PG  V VVGLGG+G  A+  A A G  +V  +  +  K + A E LGA + 
Sbjct: 182 AVVNTAGVRPGQSVAVVGLGGVGLSALLGAVAAGASQVVAVDLNEDKLALARE-LGATAT 240

Query: 233 LVSRDQDEMQ----AAMGTMDGIIDTVSAVHPLMPLIGLLKSQGKLVLVG--APEKPLEL 286
           + + D + ++       G +D   +   +V  L     + +  G  V  G   PE  L +
Sbjct: 241 VNAGDPNAVEQVRELTGGGVDYAFEMAGSVPALETAYEITRRGGTTVTAGLPDPEARLSV 300

Query: 287 PAFSLLMGRKIVGGSMIGGMKETQEM---IDFAAKHNIRAD---IEVIPADYVNTALERL 340
           PA SL+   + + GS +G     +++   +       +  D      +P D +N   +RL
Sbjct: 301 PALSLVAEERTLKGSYMGSCVPRRDIPRYLALYLSGRLPVDKLLTHRLPLDEINEGFDRL 360

Query: 341 AKADV 345
           A  + 
Sbjct: 361 AAGEA 365

NAD(P)(H)-dependent oxidoreductases are the major enzymes in the interconversion of alcohols and aldehydes or ketones. This group contains members identified as zinc dependent alcohol dehydrogenases (ADH), and class III ADG (aka formaldehyde dehydrogenase, FDH). Alcohol dehydrogenase in the liver converts ethanol and NAD+ to acetaldehyde and NADH, while in yeast and some other microorganisms ADH catalyzes the conversion acetaldehyde to ethanol in alcoholic fermentation. NAD(P)(H)-dependent oxidoreductases are the major enzymes in the interconversion of alcohols and aldehydes or ketones. Alcohol dehydrogenase in the liver converts ethanol and NAD+ to acetaldehyde and NADH, while in yeast and some other microorganisms ADH catalyzes the conversion acetaldehyde to ethanol in alcoholic fermentation. Class III ADH are also know as glutathione-dependent formaldehyde dehydrogenase (FDH), which convert aldehydes to the corresponding carboxylic acid and alcohol. ADH is a member of the medium chain alcohol dehydrogenase family (MDR), which have a NAD(P)(H)-binding domain in a Rossmann fold of a beta-alpha form. The NAD(H)-binding region is comprised of 2 structurally similar halves, each of which contacts a mononucleotide. A GxGxxG motif after the first mononucleotide contact half allows the close contact of the coenzyme with the ADH backbone. The N-terminal catalytic domain has a distant homology to GroES. These proteins typically form dimers (typically higher plants, mammals) or tetramers (yeast, bacteria), and have 2 tightly bound zinc atoms per subunit, a catalytic zinc at the active site and a structural zinc in a lobe of the catalytic domain. NAD(H) binding occurs in the cleft between the catalytic and coenzyme-binding domains at the active site, and coenzyme binding induces a conformational closing of this cleft. Coenzyme binding typically precedes and contributes to substrate binding. In human ADH catalysis, the zinc ion helps coordinate the alcohol, followed by deprotonation of a histidine, the ribose of NAD, a serine, then the alcohol, which allows the transfer of a hydride to NAD+, creating NADH and a zinc-bound aldehyde or ketone. In yeast and some bacteria, the active site zinc binds an aldehyde, polarizing it, and leading to the reverse reaction. Length = 371

>gnl|CDD|176225 cd08264, Zn_ADH_like2, Alcohol dehydrogenases of the MDR family

 Score =  101 bits (254), Expect = 1e-24
 Identities = 89/293 (30%), Positives = 129/293 (44%), Gaps = 33/293 (11%)

Query: 36  GEKDVTFKVTHCGICHSDLHMIKNEWGNTIYPIVPGHEIVGVVTEVGSKVSKFKVGDKVG 95
           G  +V  +V   G+   D ++I N       P +PG E  GVV EVG  V   K GD+V 
Sbjct: 25  GPGEVLIRVKMAGVNPVDYNVI-NAVKVKPMPHIPGAEFAGVVEEVGDHVKGVKKGDRVV 83

Query: 96  VGCMVGSCRSCDSCAIDLENYCPKVIMTYANKYHDGTITYGGYSDIMVADEHFVVRIPEG 155
           V   V    +CD C    E  C        N    G ++ GGY++ +V  E  + +IP+ 
Sbjct: 84  VYNRV-FDGTCDMCLSGNEMLC-------RNGGIIGVVSNGGYAEYIVVPEKNLFKIPDS 135

Query: 156 TPLDATAPLLCAGITVYSPLRFYGLDKPGMHVGVVGLGG-LGHVAVKFAKAMGVKVTVIS 214
              +  A L  A +T Y  L+  GL  PG  V V G  G  G  AV+ AK MG +V  +S
Sbjct: 136 ISDELAASLPVAALTAYHALKTAGL-GPGETVVVFGASGNTGIFAVQLAKMMGAEVIAVS 194

Query: 215 TSPSKKSEAIERLGADSFLVSRDQDEMQAAMGTMDGIIDTVSAVHPLMPLI-----GLLK 269
                + + ++  GAD  +V  D+ E +    T   + D V  ++ L          +L 
Sbjct: 195 -----RKDWLKEFGAD-EVVDYDEVEEKVKEIT--KMADVV--INSLGSSFWDLSLSVLG 244

Query: 270 SQGKLVLVGA---PEKPLELPAFSLLMGRKI-VGGSMIGGMKETQEMIDFAAK 318
             G+LV  G     E  L+L   S L  ++I + GS  G  KE  E++  A  
Sbjct: 245 RGGRLVTFGTLTGGEVKLDL---SDLYSKQISIIGSTGGTRKELLELVKIAKD 294

This group resembles the zinc-dependent alcohol dehydrogenases of the medium chain dehydrogenase family. However, this subgroup does not contain the characteristic catalytic zinc site. Also, it contains an atypical structural zinc-binding pattern: DxxCxxCxxxxxxxC. NAD(P)(H)-dependent oxidoreductases are the major enzymes in the interconversion of alcohols and aldehydes, or ketones. Alcohol dehydrogenase in the liver converts ethanol and NAD+ to acetaldehyde and NADH, while in yeast and some other microorganisms ADH catalyzes the conversion acetaldehyde to ethanol in alcoholic fermentation. ADH is a member of the medium chain alcohol dehydrogenase family (MDR), which has a NAD(P)(H)-binding domain in a Rossmann fold of a beta-alpha form. The NAD(H)-binding region is comprised of 2 structurally similar halves, each of which contacts a mononucleotide. A GxGxxG motif after the first mononucleotide contact half allows the close contact of the coenzyme with the ADH backbone. The N-terminal catalytic domain has a distant homology to GroES. These proteins typically form dimers (typically higher plants, mammals) or tetramers (yeast, bacteria), and have 2 tightly bound zinc atoms per subunit, a catalytic zinc at the active site and a structural zinc in a lobe of the catalytic domain. NAD(H)-binding occurs in the cleft between the catalytic and coenzyme-binding domains at the active site, and coenzyme binding induces a conformational closing of this cleft. Coenzyme binding typically precedes and contributes to substrate binding. In human ADH catalysis, the zinc ion helps coordinate the alcohol, followed by deprotonation of a histidine, the ribose of NAD, a serine, then the alcohol, which allows the transfer of a hydride to NAD+, creating NADH and a zinc-bound aldehyde or ketone. In yeast and some bacteria, the active site zinc binds an aldehyde, polarizing it, and leading to the reverse reaction. Length = 325

>gnl|CDD|176228 cd08267, MDR1, Medium chain dehydrogenases/reductase (MDR)/zinc-dependent alcohol dehydrogenase-like family

 Score = 97.3 bits (243), Expect = 6e-23
 Identities = 82/315 (26%), Positives = 125/315 (39%), Gaps = 51/315 (16%)

Query: 43  KVTHCGICHSDLHMIKNEWGNTI---YPIVPGHEIVGVVTEVGSKVSKFKVGDKVGVGCM 99
           KV    +   D  + +      +   +P +PG +  G V  VGS V++FKVGD+V  G +
Sbjct: 32  KVHAASVNPVDWKLRRGPPKLLLGRPFPPIPGMDFAGEVVAVGSGVTRFKVGDEV-FGRL 90

Query: 100 VGSCRSCDSCAIDLENYCPKVIMTYANKYHDGTITYGGYSDIMVADEHFVVRIPEG-TPL 158
                                               G  ++ +VA E  + + PEG +  
Sbjct: 91  -------------------------------PPKGGGALAEYVVAPESGLAKKPEGVSFE 119

Query: 159 DATAPLLCAGITVYSPLRFYGLDKPGMHVGVVGL-GGLGHVAVKFAKAMGVKVTVI-STS 216
           +A A L  AG+T    LR  G  KPG  V + G  GG+G  AV+ AKA+G  VT + ST 
Sbjct: 120 EA-AALPVAGLTALQALRDAGKVKPGQRVLINGASGGVGTFAVQIAKALGAHVTGVCST- 177

Query: 217 PSKKSEAIERLGADSFLVSRDQD--EMQAAMGTMDGIIDTVSAVHP-LMPLIGLLKSQGK 273
             + +E +  LGAD  +    +D   + A     D I D V      L      LK  G+
Sbjct: 178 --RNAELVRSLGADEVIDYTTEDFVALTAGGEKYDVIFDAVGNSPFSLYRASLALKPGGR 235

Query: 274 LVLVGAPEK-----PLELPAFSLLMGRKIVGGSMIGGMKETQEMIDFAAKHNIRADI-EV 327
            V VG          L LP      GR++         ++ +++ +   +  ++  I  V
Sbjct: 236 YVSVGGGPSGLLLVLLLLPLTLGGGGRRLKFFLAKPNAEDLEQLAELVEEGKLKPVIDSV 295

Query: 328 IPADYVNTALERLAK 342
            P +    A  RL  
Sbjct: 296 YPLEDAPEAYRRLKS 310

This group is a member of the medium chain dehydrogenases/reductase (MDR)/zinc-dependent alcohol dehydrogenase-like family, but lacks the zinc-binding sites of the zinc-dependent alcohol dehydrogenases. The medium chain dehydrogenases/reductase (MDR)/zinc-dependent alcohol dehydrogenase-like family, which contains the zinc-dependent alcohol dehydrogenase (ADH-Zn) and related proteins, is a diverse group of proteins related to the first identified member, class I mammalian ADH. MDRs display a broad range of activities and are distinguished from the smaller short chain dehydrogenases (~ 250 amino acids vs. the ~ 350 amino acids of the MDR). The MDR proteins have 2 domains: a C-terminal NAD(P)-binding Rossmann fold domain of a beta-alpha form and an N-terminal catalytic domain with distant homology to GroES. The MDR group contains a host of activities, including the founding alcohol dehydrogenase (ADH), quinone reductase, sorbitol dehydrogenase, formaldehyde dehydrogenase, butanediol DH, ketose reductase, cinnamyl reductase, and numerous others. The zinc-dependent alcohol dehydrogenases (ADHs) catalyze the NAD(P)(H)-dependent interconversion of alcohols to aldehydes or ketones. Active site zinc has a catalytic role, while structural zinc aids in stability. ADH-like proteins typically form dimers (typically higher plants, mammals) or tetramers (yeast, bacteria), and generally have 2 tightly bound zinc atoms per subunit. The active site zinc is coordinated by a histidine, two cysteines, and a water molecule. The second zinc seems to play a structural role, affects subunit interactions, and is typically coordinated by 4 cysteines. Length = 319

>gnl|CDD|176181 cd05278, FDH_like, Formaldehyde dehydrogenases

 Score = 97.3 bits (243), Expect = 8e-23
 Identities = 78/318 (24%), Positives = 120/318 (37%), Gaps = 23/318 (7%)

Query: 35  TGEKDVTFKVTHCGICHSDLHMIKNEWGNTI---YPIVPGHEIVGVVTEVGSKVSKFKVG 91
            G  D   +VT   IC SDLH+     G      + ++ GHE VG V EVGS V + K G
Sbjct: 23  QGPHDAIVRVTATSICGSDLHIY---RGGVPGAKHGMILGHEFVGEVVEVGSDVKRLKPG 79

Query: 92  DKVGVGCMVGSCRSCDSCAIDLENYCPKVIMTYANKYHDGTI--TYGGYSDIMVADEHFV 149
           D+V V C+   C  C  C      +C               I      Y  +  AD + +
Sbjct: 80  DRVSVPCIT-FCGRCRFCRRGYHAHCEN---GLWGWKLGNRIDGGQAEYVRVPYADMN-L 134

Query: 150 VRIPEGTPLDATAPLLCAGITVYSPLRFYGLDKPGMHVGVVGLGGLGHVAVKFAKAMGV- 208
            +IP+G P +    L     T +      G+ KPG  V V+G G +G  AV  A+ +G  
Sbjct: 135 AKIPDGLPDEDALMLSDILPTGFHGAELAGI-KPGSTVAVIGAGPVGLCAVAGARLLGAA 193

Query: 209 KVTVISTSPSKKSEAIERLGADSFLVSRDQDEMQAAMGT----MDGIIDTVSAVHPLMPL 264
           ++  + ++P +   A E    D           Q    T    +D +I+ V         
Sbjct: 194 RIIAVDSNPERLDLAKEAGATDIINPKNGDIVEQILELTGGRGVDCVIEAVGFEETFEQA 253

Query: 265 IGLLKSQGKLVLVGAPEKPLELPAFSLLMGR-KIVGGSMIGGMKETQEMIDFAAKHNIRA 323
           + +++  G +  VG   KP  LP      G+       ++       E++D   +  I  
Sbjct: 254 VKVVRPGGTIANVGVYGKPDPLPLLGEWFGKNLTFKTGLVPVRARMPELLDLIEEGKIDP 313

Query: 324 D---IEVIPADYVNTALE 338
                   P D +  A  
Sbjct: 314 SKLITHRFPLDDILKAYR 331

Formaldehyde dehydrogenase (FDH) is a member of the zinc-dependent/medium chain alcohol dehydrogenase family. Formaldehyde dehydrogenase (aka ADH3) may be the ancestral form of alcohol dehydrogenase, which evolved to detoxify formaldehyde. This CD contains glutathione dependant FDH, glutathione independent FDH, and related alcohol dehydrogenases. FDH converts formaldehyde and NAD(P) to formate and NAD(P)H. The initial step in this process the spontaneous formation of a S-(hydroxymethyl)glutathione adduct from formaldehyde and glutathione, followed by FDH-mediated oxidation (and detoxification) of the adduct to S-formylglutathione. Unlike typical FDH, Pseudomonas putida aldehyde-dismutating FDH (PFDH) is glutathione-independent. The medium chain alcohol dehydrogenase family (MDR) have a NAD(P)(H)-binding domain in a Rossmann fold of a beta-alpha form. The N-terminal region typically has an all-beta catalytic domain. These proteins typically form dimers (typically higher plants, mammals) or tetramers (yeast, bacteria), and have 2 tightly bound zinc atoms per subunit. Length = 347

>gnl|CDD|176203 cd08241, QOR1, Quinone oxidoreductase (QOR)

 Score = 95.3 bits (238), Expect = 3e-22
 Identities = 88/329 (26%), Positives = 127/329 (38%), Gaps = 63/329 (19%)

Query: 34  ATGEKDVTFKVTHCGICHSDLHMIKNEWGNTI-YPIVPGHEIVGVVTEVGSKVSKFKVGD 92
           A GE  V  +V   G+   DL MI+ ++      P VPG E+ GVV  VG  V+ FKVGD
Sbjct: 26  APGE--VRIRVEAAGVNFPDLLMIQGKYQVKPPLPFVPGSEVAGVVEAVGEGVTGFKVGD 83

Query: 93  KVGVGCMVGSCRSCDSCAIDLENYCPKVIMTYANKYHDGTITYGGYSDIMVADEHFVVRI 152
           +V                                         GG+++ +V     V  +
Sbjct: 84  RVVALTG-----------------------------------QGGFAEEVVVPAAAVFPL 108

Query: 153 PEGTPLDATAPLLCAGITVYSPLRFYGLDKPGMHVGVVGL-GGLGHVAVKFAKAMGVKVT 211
           P+G   +  A L     T Y  L      +PG  V V+G  GG+G  AV+ AKA+G +V 
Sbjct: 109 PDGLSFEEAAALPVTYGTAYHALVRRARLQPGETVLVLGAAGGVGLAAVQLAKALGARVI 168

Query: 212 VISTSPSKKSEAIERLGADSFLVSRDQDEMQAAMGTMDG-----IIDTVSAVHPLMPLIG 266
             ++S  +K      LGAD  +  RD D  +       G     + D V         + 
Sbjct: 169 AAASSE-EKLALARALGADHVIDYRDPDLRERVKALTGGRGVDVVYDPVGGDV-FEASLR 226

Query: 267 LLKSQGKLVLVG-----APEKPLELPAFSLLMGRKIVG---GSMIG-----GMKETQEMI 313
            L   G+L+++G      P+ P  L    LL    +VG   G+              E+ 
Sbjct: 227 SLAWGGRLLVIGFASGEIPQIPANLL---LLKNISVVGVYWGAYARREPELLRANLAELF 283

Query: 314 DFAAKHNIRADI-EVIPADYVNTALERLA 341
           D  A+  IR  +  V P +    AL  LA
Sbjct: 284 DLLAEGKIRPHVSAVFPLEQAAEALRALA 312

QOR catalyzes the conversion of a quinone + NAD(P)H to a hydroquinone + NAD(P)+. Quinones are cyclic diones derived from aromatic compounds. Membrane bound QOR acts in the respiratory chains of bacteria and mitochondria, while soluble QOR acts to protect from toxic quinones (e.g. DT-diaphorase) or as a soluble eye-lens protein in some vertebrates (e.g. zeta-crystalin). QOR reduces quinones through a semi-quinone intermediate via a NAD(P)H-dependent single electron transfer. QOR is a member of the medium chain dehydrogenase/reductase family, but lacks the zinc-binding sites of the prototypical alcohol dehydrogenases of this group. NAD(P)(H)-dependent oxidoreductases are the major enzymes in the interconversion of alcohols and aldehydes, or ketones. Alcohol dehydrogenase in the liver converts ethanol and NAD+ to acetaldehyde and NADH, while in yeast and some other microorganisms ADH catalyzes the conversion acetaldehyde to ethanol in alcoholic fermentation. ADH is a member of the medium chain alcohol dehydrogenase family (MDR), which has a NAD(P)(H)-binding domain in a Rossmann fold of a beta-alpha form. The NAD(H)-binding region is comprised of 2 structurally similar halves, each of which contacts a mononucleotide. A GxGxxG motif after the first mononucleotide contact half allows the close contact of the coenzyme with the ADH backbone. The N-terminal catalytic domain has a distant homology to GroES. These proteins typically form dimers (typically higher plants, mammals) or tetramers (yeast, bacteria), and have 2 tightly bound zinc atoms per subunit, a catalytic zinc at the active site, and a structural zinc in a lobe of the catalytic domain. NAD(H)-binding occurs in the cleft between the catalytic and coenzyme-binding domains at the active site, and coenzyme binding induces a conformational closing of this cleft. Coenzyme binding typically precedes and contributes to substrate binding. In human ADH catalysis, the zinc ion helps coordinate the alcohol, followed by deprotonation of a histidine, the ribose of NAD, a serine, then the alcohol, which allows the transfer of a hydride to NAD+, creating NADH and a zinc-bound aldehyde or ketone. In yeast and some bacteria, the active site zinc binds an aldehyde, polarizing it, and leading to the reverse reaction. Length = 323

>gnl|CDD|176194 cd08232, idonate-5-DH, L-idonate 5-dehydrogenase

 Score = 94.6 bits (236), Expect = 6e-22
 Identities = 76/279 (27%), Positives = 117/279 (41%), Gaps = 35/279 (12%)

Query: 36  GEKDVTFKVTHCGICHSDLH-MIKNEWGNTI--YPIVPGHEIVGVVTEVGSKVSKFKVGD 92
           G  +V  +V   GIC SDLH      +G      P+V GHE+ GVV  VG  V+    G 
Sbjct: 20  GPGEVRVRVAAGGICGSDLHYYQHGGFGTVRLREPMVLGHEVSGVVEAVGPGVTGLAPGQ 79

Query: 93  KVGVGCMVGSCRSCDSCAIDLENYCPKVIMTY---ANKY-HDGTITYGGYSDIMVADEHF 148
           +V V      C +CD C     N C    M +   A ++ H      GG+ + +V D   
Sbjct: 80  RVAVNPSR-PCGTCDYCRAGRPNLCLN--MRFLGSAMRFPH----VQGGFREYLVVDASQ 132

Query: 149 VVRIPEGTPLDATA---PLLCA--GITVYSPLRFYGLDKPGMHVGVVGLGGLGHVAVKFA 203
            V +P+G  L   A   PL  A   +     L        G  V V G G +G + V  A
Sbjct: 133 CVPLPDGLSLRRAALAEPLAVALHAVNRAGDLA-------GKRVLVTGAGPIGALVVAAA 185

Query: 204 KAMG---VKVTVISTSPSKKSEAIERLGADSFL-VSRDQ-DEMQAAMGTMDGIIDTVSAV 258
           +  G   +  T ++ +P         +GAD  + ++RD      A  G  D + +   A 
Sbjct: 186 RRAGAAEIVATDLADAP---LAVARAMGADETVNLARDPLAAYAADKGDFDVVFEASGAP 242

Query: 259 HPLMPLIGLLKSQGKLVLVGAPEKPLELPAFSLLMGRKI 297
             L   + +++  G +V VG    P+ LP  + L+ +++
Sbjct: 243 AALASALRVVRPGGTVVQVGMLGGPVPLP-LNALVAKEL 280

L-idonate 5-dehydrogenase (L-ido 5-DH ) catalyzes the conversion of L-lodonate to 5-ketogluconate in the metabolism of L-Idonate to 6-P-gluconate. In E. coli, this GntII pathway is a subsidiary pathway to the canonical GntI system, which also phosphorylates and transports gluconate. L-ido 5-DH is found in an operon with a regulator indR, transporter idnT, 5-keto-D-gluconate 5-reductase, and Gnt kinase. L-ido 5-DH is a zinc-dependent alcohol dehydrogenase-like protein. The alcohol dehydrogenase ADH-like family of proteins is a diverse group of proteins related to the first identified member, class I mammalian ADH. This group is also called the medium chain dehydrogenases/reductase family (MDR) which displays a broad range of activities and are distinguished from the smaller short chain dehydrogenases(~ 250 amino acids vs. the ~ 350 amino acids of the MDR). The MDR proteins have 2 domains: a C-terminal NAD(P) binding-Rossmann fold domain of a beta-alpha form and an N-terminal GroES-like catalytic domain. The MDR group contains a host of activities, including the founding alcohol dehydrogenase (ADH), quinone reductase, sorbitol dehydrogenase, formaldehyde dehydrogenase, butanediol DH, ketose reductase, cinnamyl reductase, and numerous others. The zinc-dependent alcohol dehydrogenases (ADHs) catalyze the NAD(P)(H)-dependent interconversion of alcohols to aldehydes or ketones. ADH-like proteins typically form dimers (typically higher plants, mammals) or tetramers (yeast, bacteria), and generally have 2 tightly bound zinc atoms per subunit. The active site zinc is coordinated by a histidine, two cysteines, and a water molecule. The second zinc seems to play a structural role, affects subunit interactions, and is typically coordinated by 4 cysteines. Length = 339

>gnl|CDD|176222 cd08261, Zn_ADH7, Alcohol dehydrogenases of the MDR family

 Score = 93.8 bits (234), Expect = 1e-21
 Identities = 78/261 (29%), Positives = 117/261 (44%), Gaps = 25/261 (9%)

Query: 36  GEKDVTFKVTHCGICHSDLHMIKNEWGN---TIYPIVPGHEIVGVVTEVGSKVSKFKVGD 92
           G  +V  +V   GIC SDLH+     G      YP + GHE+ G V EVG  V+  KVGD
Sbjct: 23  GAGEVLVRVKRVGICGSDLHIYH---GRNPFASYPRILGHELSGEVVEVGEGVAGLKVGD 79

Query: 93  KVGVGCMVGSCRSCDSCAIDLENYCPKVIMTYANKYHDGTITYGGYSDIMVADEHFVVRI 152
           +V V     SC  C +C     N C  + +        G    GG+++ +V     ++ +
Sbjct: 80  RV-VVDPYISCGECYACRKGRPNCCENLQVL-------GVHRDGGFAEYIVVPADALL-V 130

Query: 153 PEGTPLDATAPLLCAGITVYSPLRFYGLDKPGMHVGVVGLGGLGHVAVKFAKAMGVKVTV 212
           PEG  LD  A +    I  ++  R       G  V VVG G +G   ++ AKA G +V V
Sbjct: 131 PEGLSLDQAALVEPLAIGAHAVRR--AGVTAGDTVLVVGAGPIGLGVIQVAKARGARVIV 188

Query: 213 ISTSPSKKSEAIERLGADSFLVSRDQDEMQAAMGTM------DGIIDTVSAVHPLMPLIG 266
           +     +  E    LGAD  +   D+D + A +  +      D +ID       +   + 
Sbjct: 189 VDIDDERL-EFARELGADDTINVGDED-VAARLRELTDGEGADVVIDATGNPASMEEAVE 246

Query: 267 LLKSQGKLVLVGAPEKPLELP 287
           L+   G++VLVG  + P+  P
Sbjct: 247 LVAHGGRVVLVGLSKGPVTFP 267

This group contains members identified as related to zinc-dependent alcohol dehydrogenase and other members of the MDR family. The medium chain dehydrogenases/reductase (MDR)/zinc-dependent alcohol dehydrogenase-like family, which contains the zinc-dependent alcohol dehydrogenase (ADH-Zn) and related proteins, is a diverse group of proteins related to the first identified member, class I mammalian ADH. MDRs display a broad range of activities and are distinguished from the smaller short chain dehydrogenases (~ 250 amino acids vs. the ~ 350 amino acids of the MDR). The MDR proteins have 2 domains: a C-terminal NAD(P)-binding Rossmann fold domain of a beta-alpha form and an N-terminal catalytic domain with distant homology to GroES. The MDR group includes various activities, including the founding alcohol dehydrogenase (ADH), quinone reductase, sorbitol dehydrogenase, formaldehyde dehydrogenase, butanediol DH, ketose reductase, cinnamyl reductase, and numerous others. The zinc-dependent alcohol dehydrogenases (ADHs) catalyze the NAD(P)(H)-dependent interconversion of alcohols to aldehydes or ketones. Active site zinc has a catalytic role, while structural zinc aids in stability. ADH-like proteins typically form dimers (typically higher plants, mammals) or tetramers (yeast, bacteria), and generally have 2 tightly bound zinc atoms per subunit. The active site zinc is coordinated by a histidine, two cysteines, and a water molecule. The second zinc seems to play a structural role, affects subunit interactions, and is typically coordinated by 4 cysteines. Length = 337

>gnl|CDD|176259 cd08299, alcohol_DH_class_I_II_IV, class I, II, IV alcohol dehydrogenases

 Score = 93.5 bits (233), Expect = 3e-21
 Identities = 96/338 (28%), Positives = 141/338 (41%), Gaps = 44/338 (13%)

Query: 38  KDVTFKVTHCGICHSDLHMIKNEWGNTIYPIVPGHEIVGVVTEVGSKVSKFKVGDKVGVG 97
            +V  K+   GIC SD H++  +   T +P++ GHE  G+V  VG  V+  K GDKV + 
Sbjct: 33  HEVRIKIVATGICRSDDHVVSGKLV-TPFPVILGHEAAGIVESVGEGVTTVKPGDKV-IP 90

Query: 98  CMVGSCRSCDSCAIDLENYCPKV-IMTYANKYHDGT--ITYGG-----------YSDIMV 143
             V  C  C +C     N C K  +        DGT   T  G           +S+  V
Sbjct: 91  LFVPQCGKCRACLNPESNLCLKNDLGKPQGLMQDGTSRFTCKGKPIHHFLGTSTFSEYTV 150

Query: 144 ADEHFVVRIPEGTPLDATAPLLCAGITVYSPLRFYGLDKPGMHVGVVGLGGLGHVAVKFA 203
            DE  V +I    PL+    + C   T Y          PG    V GLGG+G  A+   
Sbjct: 151 VDEIAVAKIDAAAPLEKVCLIGCGFSTGYGAAVNTAKVTPGSTCAVFGLGGVGLSAIMGC 210

Query: 204 KAMGV-KVTVISTSPSKKSEAIERLGADSFLVSRDQD----EMQAAM--GTMD------G 250
           KA G  ++  +  +  K ++A E LGA   +  +D      E+   M  G +D      G
Sbjct: 211 KAAGASRIIAVDINKDKFAKAKE-LGATECINPQDYKKPIQEVLTEMTDGGVDFSFEVIG 269

Query: 251 IIDTVSAVHPLMPLIGLLKSQGKLVLVGAP--EKPLELPAFSLLMGRKIVGGSMIGGMKE 308
            +DT+ A      L    +  G  V+VG P   + L +    LL GR    G++ GG K 
Sbjct: 270 RLDTMKAA-----LASCHEGYGVSVIVGVPPSSQNLSINPMLLLTGR-TWKGAVFGGWKS 323

Query: 309 TQEM----IDFAAKH-NIRADI-EVIPADYVNTALERL 340
              +     D+ AK  N+   I   +P + +N   + L
Sbjct: 324 KDSVPKLVADYMAKKFNLDPLITHTLPFEKINEGFDLL 361

NAD(P)(H)-dependent oxidoreductases are the major enzymes in the interconversion of alcohols and aldehydes or ketones. This group includes alcohol dehydrogenases corresponding to mammalian classes I, II, IV. Alcohol dehydrogenase in the liver converts ethanol and NAD+ to acetaldehyde and NADH, while in yeast and some other microorganisms ADH catalyzes the conversion acetaldehyde to ethanol in alcoholic fermentation. ADH is a member of the medium chain alcohol dehydrogenase family (MDR), which have a NAD(P)(H)-binding domain in a Rossmann fold of a beta-alpha form. The NAD(H)-binding region is comprised of 2 structurally similar halves, each of which contacts a mononucleotide. A GxGxxG motif after the first mononucleotide contact half allows the close contact of the coenzyme with the ADH backbone. The N-terminal catalytic domain has a distant homology to GroES. These proteins typically form dimers (typically higher plants, mammals) or tetramers (yeast, bacteria), and have 2 tightly bound zinc atoms per subunit, a catalytic zinc at the active site and a structural zinc in a lobe of the catalytic domain. NAD(H) binding occurs in the cleft between the catalytic and coenzyme-binding domains at the active site, and coenzyme binding induces a conformational closing of this cleft. Coenzyme binding typically precedes and contributes to substrate binding. In human ADH catalysis, the zinc ion helps coordinate the alcohol, followed by deprotonation of a histidine (His-51), the ribose of NAD, a serine (Ser-48) , then the alcohol, which allows the transfer of a hydride to NAD+, creating NADH and a zinc-bound aldehyde or ketone. In yeast and some bacteria, the active site zinc binds an aldehyde, polarizing it, and leading to the reverse reaction. Length = 373

>gnl|CDD|176188 cd05285, sorbitol_DH, Sorbitol dehydrogenase

 Score = 92.9 bits (232), Expect = 3e-21
 Identities = 78/278 (28%), Positives = 121/278 (43%), Gaps = 31/278 (11%)

Query: 36  GEKDVTFKVTHCGICHSDLHMIKN-EWGNTIY--PIVPGHEIVGVVTEVGSKVSKFKVGD 92
           G  +V  +V   GIC SD+H  K+   G+ +   P+V GHE  G V  VGS V+  KVGD
Sbjct: 21  GPGEVLVRVRAVGICGSDVHYYKHGRIGDFVVKEPMVLGHESAGTVVAVGSGVTHLKVGD 80

Query: 93  KVGV--GCMVGSCRSCDSCAIDLENYCPKVIMTYANKYHDGTITYGGYSDIMVADEHFVV 150
           +V +  G     CR+C+ C     N CP +    A    DGT+        +     F  
Sbjct: 81  RVAIEPGV---PCRTCEFCKSGRYNLCPDMRF-AATPPVDGTLC-----RYVNHPADFCH 131

Query: 151 RIPEGTPLDATAPLLCAGITVYSPLRFYGLDKPGMHVGVVGLGGLGHVAVKFAKAMGVKV 210
           ++P+   L+  A +    + V++  R     +PG  V V G G +G +    AKA G   
Sbjct: 132 KLPDNVSLEEGALVEPLSVGVHACRR--AGVRPGDTVLVFGAGPIGLLTAAVAKAFGATK 189

Query: 211 TVISTSPSKKSEAIERLGADSFLVSRDQD------EMQAAMGTM--DGIIDTV---SAVH 259
            V++     + E  + LGA   +  R +D      ++   +G    D +I+     S + 
Sbjct: 190 VVVTDIDPSRLEFAKELGATHTVNVRTEDTPESAEKIAELLGGKGPDVVIECTGAESCIQ 249

Query: 260 PLMPLIGLLKSQGKLVLVGAPEKPLELPAFSLLMGRKI 297
                I   +  G +VLVG  +  + LP  S    R+I
Sbjct: 250 ---TAIYATRPGGTVVLVGMGKPEVTLP-LSAASLREI 283

Sorbitol and aldose reductase are NAD(+) binding proteins of the polyol pathway, which interconverts glucose and fructose. Sorbitol dehydrogenase is tetrameric and has a single catalytic zinc per subunit. Aldose reductase catalyzes the NADP(H)-dependent conversion of glucose to sorbital, and SDH uses NAD(H) in the conversion of sorbitol to fructose. NAD(P)(H)-dependent oxidoreductases are the major enzymes in the interconversion of alcohols and aldehydes, or ketones. The medium chain alcohol dehydrogenase family (MDR) have a NAD(P)(H)-binding domain in a Rossmann fold of a beta-alpha form. The N-terminal region typically has an all-beta catalytic domain. These proteins typically form dimers (typically higher plants, mammals) or tetramers (yeast, bacteria), and have 2 tightly bound zinc atoms per subunit. Length = 343

>gnl|CDD|176261 cd08301, alcohol_DH_plants, Plant alcohol dehydrogenase

 Score = 92.4 bits (230), Expect = 7e-21
 Identities = 82/313 (26%), Positives = 124/313 (39%), Gaps = 66/313 (21%)

Query: 39  DVTFKVTHCGICHSDLHMIKNEWGNTIYPIVPGHEIVGVVTEVGSKVSKFKVGDKVGVGC 98
           +V  K+ H  +CH+D++  + +    ++P + GHE  G+V  VG  V+  K GD V +  
Sbjct: 29  EVRIKILHTSLCHTDVYFWEAKGQTPLFPRILGHEAAGIVESVGEGVTDLKPGDHV-LPV 87

Query: 99  MVGSCRSCDSCAIDLENYCPKV-------IMTYANK----------YH-DGTITYGGYSD 140
             G C+ C  C  +  N C  +       +M    K          YH  GT T+  Y+ 
Sbjct: 88  FTGECKECRHCKSEKSNMCDLLRINTDRGVMINDGKSRFSINGKPIYHFVGTSTFSEYT- 146

Query: 141 IMVADEHFVVRIPEGTPLDATAPLLC-------AGITVYSPLRFYGLDKPGMHVGVVGLG 193
             V     V +I    PLD    L C       A   V          K G  V + GLG
Sbjct: 147 --VVHVGCVAKINPEAPLDKVCLLSCGVSTGLGAAWNVAKV-------KKGSTVAIFGLG 197

Query: 194 GLGHVAVKFAKAMGV-KVTVISTSPSKKSEAIERLGADSFLVSRDQD----EMQAAM--- 245
            +G    + A+  G  ++  +  +PSK  +A ++ G   F+  +D D    E+ A M   
Sbjct: 198 AVGLAVAEGARIRGASRIIGVDLNPSKFEQA-KKFGVTEFVNPKDHDKPVQEVIAEMTGG 256

Query: 246 ---------GTMDGIIDTVSAVHPLMPLIGLLKSQGKLVLVGAPEKPLELPA--FSLLMG 294
                    G +D +I     VH            G  VL+G P K         +LL G
Sbjct: 257 GVDYSFECTGNIDAMISAFECVHD---------GWGVTVLLGVPHKDAVFSTHPMNLLNG 307

Query: 295 RKIVGGSMIGGMK 307
           R +  G++ GG K
Sbjct: 308 RTLK-GTLFGGYK 319

NAD(P)(H)-dependent oxidoreductases are the major enzymes in the interconversion of alcohols and aldehydes or ketones. Alcohol dehydrogenase in the liver converts ethanol and NAD+ to acetaldehyde and NADH, while in yeast and some other microorganisms ADH catalyzes the conversion acetaldehyde to ethanol in alcoholic fermentation. There are 7 vertebrate ADH 7 classes, 6 of which have been identified in humans. Class III, glutathione-dependent formaldehyde dehydrogenase, has been identified as the primordial form and exists in diverse species, including plants, micro-organisms, vertebrates, and invertebrates. Class I, typified by liver dehydrogenase, is an evolving form. Gene duplication and functional specialization of ADH into ADH classes and subclasses created numerous forms in vertebrates. For example, the A, B and C (formerly alpha, beta, gamma) human class I subunits have high overall structural similarity, but differ in the substrate binding pocket and therefore in substrate specificity. In human ADH catalysis, the zinc ion helps coordinate the alcohol, followed by deprotonation of a histidine (His-51), the ribose of NAD, a serine (Ser-48) , then the alcohol, which allows the transfer of a hydride to NAD+, creating NADH and a zinc-bound aldehyde or ketone. In yeast and some bacteria, the active site zinc binds an aldehyde, polarizing it, and leading to the reverse reaction. ADH is a member of the medium chain alcohol dehydrogenase family (MDR), which has a NAD(P)(H)-binding domain in a Rossmann fold of an beta-alpha form. The NAD(H)-binding region is comprised of 2 structurally similar halves, each of which contacts a mononucleotide. A GxGxxG motif after the first mononucleotide contact half allows the close contact of the coenzyme with the ADH backbone. The N-terminal catalytic domain has a distant homology to GroES. These proteins typically form dimers (typically higher plants, mammals) or tetramers (yeast, bacteria), and have 2 tightly bound zinc atoms per subunit, a catalytic zinc at the active site and a structural zinc in a lobe of the catalytic domain. NAD(H) binding occurs in the cleft between the catalytic and coenzyme-binding domains at the active site, and coenzyme binding induces a conformational closing of this cleft. Coenzyme binding typically precedes and contributes to substrate binding. Length = 369

>gnl|CDD|176227 cd08266, Zn_ADH_like1, Alcohol dehydrogenases of the MDR family

 Score = 88.1 bits (219), Expect = 1e-19
 Identities = 83/332 (25%), Positives = 137/332 (41%), Gaps = 29/332 (8%)

Query: 36  GEKDVTFKVTHCGICHSDLHMIKNEWGNTI-YPIVPGHEIVGVVTEVGSKVSKFKVGDKV 94
           G  +V  +V    + H DL + +   G  +  P + G +  GVV  VG  V+  K G +V
Sbjct: 26  GPDEVLVRVKAAALNHLDLWVRRGMPGIKLPLPHILGSDGAGVVEAVGPGVTNVKPGQRV 85

Query: 95  GVGCMVGSCRSCDSCAIDLENYCPKVIMTYANKYHDGTITYGGYSDIMVADEHFVVRIPE 154
            +   + SC  C+ C    EN C +  +        G    GGY++ +      ++ IP+
Sbjct: 86  VIYPGI-SCGRCEYCLAGRENLCAQYGIL-------GEHVDGGYAEYVAVPARNLLPIPD 137

Query: 155 GTPLD--ATAPLLCAGITVYSPLRFYGLDKPGMHVGVVGLG-GLGHVAVKFAKAMGVKVT 211
               +  A APL    +T +  L      +PG  V V G G G+G  A++ AK  G  V 
Sbjct: 138 NLSFEEAAAAPL--TFLTAWHMLVTRARLRPGETVLVHGAGSGVGSAAIQIAKLFGATVI 195

Query: 212 VISTSPSKKSEAIERLGADSFLVSRDQDEM------QAAMGTMDGIIDTVSAVHPLMPLI 265
             + S  K   A E LGAD +++   +++             +D +++ V A       +
Sbjct: 196 ATAGSEDKLERAKE-LGAD-YVIDYRKEDFVREVRELTGKRGVDVVVEHVGAAT-WEKSL 252

Query: 266 GLLKSQGKLVLVGA---PEKPLELPAFSLLMGRKIVGGSMIGGMKETQEMIDFAAKHNIR 322
             L   G+LV  GA    E P++L          I+G +M G   E  E +    +  ++
Sbjct: 253 KSLARGGRLVTCGATTGYEAPIDL-RHVFWRQLSILGSTM-GTKAELDEALRLVFRGKLK 310

Query: 323 ADIE-VIPADYVNTALERLAKADVRYRFVIDV 353
             I+ V P +    A  RL   +   + V+  
Sbjct: 311 PVIDSVFPLEEAAEAHRRLESREQFGKIVLTP 342

This group contains proteins related to the zinc-dependent alcohol dehydrogenases. However, while the group has structural zinc site characteristic of these enzymes, it lacks the consensus site for a catalytic zinc. NAD(P)(H)-dependent oxidoreductases are the major enzymes in the interconversion of alcohols and aldehydes, or ketones. Alcohol dehydrogenase in the liver converts ethanol and NAD+ to acetaldehyde and NADH, while in yeast and some other microorganisms ADH catalyzes the conversion acetaldehyde to ethanol in alcoholic fermentation. ADH is a member of the medium chain alcohol dehydrogenase family (MDR), which has a NAD(P)(H)-binding domain in a Rossmann fold of a beta-alpha form. The NAD(H)-binding region is comprised of 2 structurally similar halves, each of which contacts a mononucleotide. A GxGxxG motif after the first mononucleotide contact half allows the close contact of the coenzyme with the ADH backbone. The N-terminal catalytic domain has a distant homology to GroES. These proteins typically form dimers (typically higher plants, mammals) or tetramers (yeast, bacteria), and have 2 tightly bound zinc atoms per subunit, a catalytic zinc at the active site, and a structural zinc in a lobe of the catalytic domain. NAD(H)-binding occurs in the cleft between the catalytic and coenzyme-binding domains at the active site, and coenzyme binding induces a conformational closing of this cleft. Coenzyme binding typically precedes and contributes to substrate binding. In human ADH catalysis, the zinc ion helps coordinate the alcohol, followed by deprotonation of a histidine, the ribose of NAD, a serine, then the alcohol, which allows the transfer of a hydride to NAD+, creating NADH and a zinc-bound aldehyde or ketone. In yeast and some bacteria, the active site zinc binds an aldehyde, polarizing it, and leading to the reverse reaction. Length = 342

>gnl|CDD|176246 cd08286, FDH_like_ADH2, formaldehyde dehydrogenase (FDH)-like

 Score = 86.5 bits (215), Expect = 4e-19
 Identities = 70/224 (31%), Positives = 107/224 (47%), Gaps = 29/224 (12%)

Query: 39  DVTFKVTHCGICHSDLHMIKNEWGN--TIYP-IVPGHEIVGVVTEVGSKVSKFKVGDKVG 95
           D   K+    IC +DLH++K   G+  T+ P  + GHE VGVV EVGS V+ FKVGD+V 
Sbjct: 27  DAIVKMLKTTICGTDLHILK---GDVPTVTPGRILGHEGVGVVEEVGSAVTNFKVGDRVL 83

Query: 96  VGCMVGSCRSCDSCAIDLENYCPKVIMTYANKYHDGT------ITYGGYSDIMVADEHFV 149
           + C+  SC +C  C   L ++C        N   DGT      I +   S         +
Sbjct: 84  ISCIS-SCGTCGYCRKGLYSHCESGGWILGNLI-DGTQAEYVRIPHADNS---------L 132

Query: 150 VRIPEGTPLDATAPLLCAGI--TVYSPLRFYGLDKPGMHVGVVGLGGLGHVAVKFAKAMG 207
            ++PEG  +D  A ++ + I  T Y      G  KPG  V +VG G +G  A+  A+   
Sbjct: 133 YKLPEG--VDEEAAVMLSDILPTGYECGVLNGKVKPGDTVAIVGAGPVGLAALLTAQLYS 190

Query: 208 -VKVTVISTSPSKKSEAIERLGADSFLVSRDQDEMQAAMGTMDG 250
             K+ ++    ++  E  ++LGA   + S   D ++  +   DG
Sbjct: 191 PSKIIMVDLDDNRL-EVAKKLGATHTVNSAKGDAIEQVLELTDG 233

This group is related to formaldehyde dehydrogenase (FDH), which is a member of the zinc-dependent/medium chain alcohol dehydrogenase family. This family uses NAD(H) as a cofactor in the interconversion of alcohols and aldehydes, or ketones. Another member is identified as a dihydroxyacetone reductase. Like the zinc-dependent alcohol dehydrogenases (ADH) of the medium chain alcohol dehydrogenase/reductase family (MDR), tetrameric FDHs have a catalytic zinc that resides between the catalytic and NAD(H)binding domains and a structural zinc in a lobe of the catalytic domain. Unlike ADH, where NAD(P)(H) acts as a cofactor, NADH in FDH is a tightly bound redox cofactor (similar to nicotinamide proteins). The medium chain alcohol dehydrogenase family (MDR) has a NAD(P)(H)-binding domain in a Rossmann fold of a beta-alpha form. The N-terminal region typically has an all-beta catalytic domain. These proteins typically form dimers (typically higher plants, mammals) or tetramers (yeast, bacteria), and have 2 tightly bound zinc atoms per subunit. Length = 345

>gnl|CDD|176237 cd08276, MDR7, Medium chain dehydrogenases/reductase (MDR)/zinc-dependent alcohol dehydrogenase-like family

 Score = 86.1 bits (214), Expect = 6e-19
 Identities = 76/313 (24%), Positives = 121/313 (38%), Gaps = 55/313 (17%)

Query: 53  DLHMIKNEWGN-TIYPIVPGHEIVGVVTEVGSKVSKFKVGDKVGVGCMVGSCRSCDSCAI 111
           DL ++   +      P++P  +  G V  VG  V++FKVGD+V                 
Sbjct: 43  DLLILNGRYPPPVKDPLIPLSDGAGEVVAVGEGVTRFKVGDRV----------------- 85

Query: 112 DLENYCPKVIMTYANKYHDGTITY------------GGYSDIMVADEHFVVRIPEGTPLD 159
                 P    T+   + DG  T             G  ++ +V  E  +VR P+    +
Sbjct: 86  -----VP----TFFPNWLDGPPTAEDEASALGGPIDGVLAEYVVLPEEGLVRAPDHLSFE 136

Query: 160 ATAPLLCAGITVYSPLRFYGLDKPGMHVGVVGLGGLGHVAVKFAKAMGVKVTVISTSPSK 219
             A L CAG+T ++ L   G  KPG  V V G GG+   A++FAKA G +V + ++S  +
Sbjct: 137 EAATLPCAGLTAWNALFGLGPLKPGDTVLVQGTGGVSLFALQFAKAAGARV-IATSSSDE 195

Query: 220 KSEAIERLGADSFLVSRDQDEMQAA------MGTMDGIIDTVSAVHPLMPL---IGLLKS 270
           K E  + LGAD  +  R   +             +D +++          L   I  +  
Sbjct: 196 KLERAKALGADHVINYRTTPDWGEEVLKLTGGRGVDHVVEVGGPGT----LAQSIKAVAP 251

Query: 271 QGKLVLVGA-PEKPLELPAFSLLMGRKIVGGSMIGGMKETQEMIDFAAKHNIRADIE-VI 328
            G + L+G        +    LL     + G  +G   + + M      H IR  I+ V 
Sbjct: 252 GGVISLIGFLSGFEAPVLLLPLLTKGATLRGIAVGSRAQFEAMNRAIEAHRIRPVIDRVF 311

Query: 329 PADYVNTALERLA 341
           P +    A   L 
Sbjct: 312 PFEEAKEAYRYLE 324

This group is a member of the medium chain dehydrogenases/reductase (MDR)/zinc-dependent alcohol dehydrogenase-like family, but lacks the zinc-binding sites of the zinc-dependent alcohol dehydrogenases. The medium chain dehydrogenases/reductase (MDR)/zinc-dependent alcohol dehydrogenase-like family, which contains the zinc-dependent alcohol dehydrogenase (ADH-Zn) and related proteins, is a diverse group of proteins related to the first identified member, class I mammalian ADH. MDRs display a broad range of activities and are distinguished from the smaller short chain dehydrogenases (~ 250 amino acids vs. the ~ 350 amino acids of the MDR). The MDR proteins have 2 domains: a C-terminal NAD(P)-binding Rossmann fold domain of a beta-alpha form and an N-terminal catalytic domain with distant homology to GroES. The MDR group contains a host of activities, including the founding alcohol dehydrogenase (ADH), quinone reductase, sorbitol dehydrogenase, formaldehyde dehydrogenase, butanediol DH, ketose reductase, cinnamyl reductase, and numerous others. The zinc-dependent alcohol dehydrogenases (ADHs) catalyze the NAD(P)(H)-dependent interconversion of alcohols to aldehydes or ketones. Active site zinc has a catalytic role, while structural zinc aids in stability. ADH-like proteins typically form dimers (typically higher plants, mammals) or tetramers (yeast, bacteria), and generally have 2 tightly bound zinc atoms per subunit. The active site zinc is coordinated by a histidine, two cysteines, and a water molecule. The second zinc seems to play a structural role, affects subunit interactions, and is typically coordinated by 4 cysteines. Length = 336

>gnl|CDD|176244 cd08284, FDH_like_2, Glutathione-dependent formaldehyde dehydrogenase related proteins, child 2

 Score = 85.8 bits (213), Expect = 1e-18
 Identities = 63/199 (31%), Positives = 88/199 (44%), Gaps = 18/199 (9%)

Query: 38  KDVTFKVTHCGICHSDLHMIKNEWGNTIYPIVPGHEIVGVVTEVGSKVSKFKVGDKVGVG 97
            D   KVT   IC SDLH+ +    +T    V GHE VG V EVG +V   KVGD+V V 
Sbjct: 26  TDAIVKVTAAAICGSDLHIYRGHIPST-PGFVLGHEFVGEVVEVGPEVRTLKVGDRV-VS 83

Query: 98  CMVGSCRSCDSCAIDLENYCPKVIMTYANKYHDGTITYGG----YSDIMVADEHFVVRIP 153
               +C  C  C       C K  +      + G+    G    Y  +  AD   ++++P
Sbjct: 84  PFTIACGECFYCRRGQSGRCAKGGLF----GYAGSPNLDGAQAEYVRVPFAD-GTLLKLP 138

Query: 154 EGTPLDATAPLLCAGI--TVYSPLRFYGLDKPGMHVGVVGLGGLGHVAVKFAKAMGV-KV 210
           +G   +A   LL   I  T Y   +     +PG  V V+G G +G  AV  A+ +G  +V
Sbjct: 139 DGLSDEAA--LLLGDILPTGYFGAK-RAQVRPGDTVAVIGCGPVGLCAVLSAQVLGAARV 195

Query: 211 TVISTSPSKKSEAIERLGA 229
             +   P +   A   LGA
Sbjct: 196 FAVDPVPERLERA-AALGA 213

Glutathione-dependent formaldehyde dehydrogenases (FDHs) are members of the zinc-dependent/medium chain alcohol dehydrogenase family. Formaldehyde dehydrogenase (FDH) is a member of the zinc-dependent/medium chain alcohol dehydrogenase family. FDH converts formaldehyde and NAD to formate and NADH. The initial step in this process the spontaneous formation of a S-(hydroxymethyl)glutathione adduct from formaldehyde and glutathione, followed by FDH-mediated oxidation (and detoxification) of the adduct to S-formylglutathione. These tetrameric FDHs have a catalytic zinc that resides between the catalytic and NAD(H)binding domains and a structural zinc in a lobe of the catalytic domain. The medium chain alcohol dehydrogenase family (MDR) has a NAD(P)(H)-binding domain in a Rossmann fold of a beta-alpha form. The N-terminal region typically has an all-beta catalytic domain. These proteins typically form dimers (typically higher plants, mammals) or tetramers (yeast, bacteria), and have 2 tightly bound zinc atoms per subunit. Length = 344

>gnl|CDD|215721 pfam00107, ADH_zinc_N, Zinc-binding dehydrogenase

 Score = 79.3 bits (196), Expect = 4e-18
 Identities = 42/131 (32%), Positives = 66/131 (50%), Gaps = 6/131 (4%)

Query: 194 GLGHVAVKFAKAMGVKVTVISTSPSKKSEAIERLGADSFLVSRDQD---EMQAAMGTM-- 248
           G+G  AV+ AKA+G    +      +K E  + LGAD  +  RD+D    ++   G    
Sbjct: 1   GVGLAAVQLAKALGAARVIAVDRSEEKLELAKELGADHVINYRDEDFVERVRELTGGRGV 60

Query: 249 DGIIDTVSAVHPLMPLIGLLKSQGKLVLVGAPE-KPLELPAFSLLMGRKIVGGSMIGGMK 307
           D +ID V A   L   + LL+  G++V+VG P   P+  P   LL+    + GS+ GG +
Sbjct: 61  DVVIDCVGAPATLEQALELLRPGGRVVVVGLPGGAPVPFPLRDLLLKELTILGSLGGGRE 120

Query: 308 ETQEMIDFAAK 318
           E +E ++  A 
Sbjct: 121 EFEEALELLAS 131

Length = 131

>gnl|CDD|182371 PRK10309, PRK10309, galactitol-1-phosphate dehydrogenase; Provisional

 Score = 83.3 bits (206), Expect = 7e-18
 Identities = 80/280 (28%), Positives = 125/280 (44%), Gaps = 30/280 (10%)

Query: 37  EKDVTFKVTHCGICHSDLHMIKNEWGNTIYPIVPGHEIVGVVTEVGSKVSKFKVGDKVGV 96
           + DV  KV   G+C SD+  I    G   YPI  GHE  G V  VGS V     GD   V
Sbjct: 25  QDDVLVKVASSGLCGSDIPRIFKN-GAHYYPITLGHEFSGYVEAVGSGVDDLHPGD--AV 81

Query: 97  GCM-VGSCRSCDSCAIDLENYCPKVIMTYANKYHDGTITYGGYSDIMVADEHFVVRIPEG 155
            C+ +  C +C  C     + C       A     G+   GG ++ +V     +  +P  
Sbjct: 82  ACVPLLPCFTCPECLRGFYSLC-------AKYDFIGSRRDGGNAEYIVVKRKNLFALPTD 134

Query: 156 TPLDATAPLLCAGITVYSPLRFYGLDK--PGMHVGVVGLGGLGHVAVKFAKAMGVK-VTV 212
            P++  A      ITV   L  + L +   G +V ++G G +G +A++ A A+G K VT 
Sbjct: 135 MPIEDGA--FIEPITV--GLHAFHLAQGCEGKNVIIIGAGTIGLLAIQCAVALGAKSVTA 190

Query: 213 ISTSPSKKSEAIERLGADSFLVSRDQ--DEMQAAMGTM--DGIIDTVSAVHPLMPL-IGL 267
           I  +  K + A + LGA     SR+    ++Q+ +  +  D +I   + V   + L I +
Sbjct: 191 IDINSEKLALA-KSLGAMQTFNSREMSAPQIQSVLRELRFDQLILETAGVPQTVELAIEI 249

Query: 268 LKSQGKLVLVGAPEKPLELPA--FSLLMGRK---IVGGSM 302
              + +L LVG     L L +  F  ++ RK   ++G  M
Sbjct: 250 AGPRAQLALVGTLHHDLHLTSATFGKIL-RKELTVIGSWM 288

Length = 347

>gnl|CDD|176232 cd08271, MDR5, Medium chain dehydrogenases/reductase (MDR)/zinc-dependent alcohol dehydrogenase-like family

 Score = 82.3 bits (204), Expect = 1e-17
 Identities = 73/267 (27%), Positives = 105/267 (39%), Gaps = 51/267 (19%)

Query: 36  GEKDVTFKVTHCGICHSDLHMIKNEWGNTIYPIVPGHEIVGVVTEVGSKVSKFKVGDKVG 95
           G  +V  KV   G+   D  +I        YP VPG +  GVV  VG+KV+ +KVGD+V 
Sbjct: 26  GAGEVLVKVHAAGLNPVDWKVIAWGPPAWSYPHVPGVDGAGVVVAVGAKVTGWKVGDRVA 85

Query: 96  VGCMVGSCRSCDSCAIDLENYCPKVIMTYANKYHDGTITYGGYSDIMVADEHFVVRIPEG 155
                                           YH      G +++  V D   V+ +P+ 
Sbjct: 86  --------------------------------YHASLARGGSFAEYTVVDARAVLPLPDS 113

Query: 156 TPLDATAPLLCAGITVYSPLRFYGLDKPGMHVG-----VVGLGGLGHVAVKFAKAMGVKV 210
              +  A L CAG+T Y  L      K  +  G       G GG+G  AV+ AK  G  +
Sbjct: 114 LSFEEAAALPCAGLTAYQALF----KKLRIEAGRTILITGGAGGVGSFAVQLAKRAG--L 167

Query: 211 TVISTSPSKKSEAIERLGADSFLVSRDQDEMQAAMGTMDG-----IIDTVSAVHPLMPLI 265
            VI+T   +  E ++ LGAD  +   D+D  +       G     ++DTV        L 
Sbjct: 168 RVITTCSKRNFEYVKSLGADHVIDYNDEDVCERIKEITGGRGVDAVLDTVGGETAAA-LA 226

Query: 266 GLLKSQGKLV-LVGAPEKPLELPAFSL 291
             L   G LV + G P+     P F+ 
Sbjct: 227 PTLAFNGHLVCIQGRPDAS-PDPPFTR 252

This group is a member of the medium chain dehydrogenases/reductase (MDR)/zinc-dependent alcohol dehydrogenase-like family, but lacks the zinc-binding sites of the zinc-dependent alcohol dehydrogenases. The medium chain dehydrogenases/reductase (MDR)/zinc-dependent alcohol dehydrogenase-like family, which contains the zinc-dependent alcohol dehydrogenase (ADH-Zn) and related proteins, is a diverse group of proteins related to the first identified member, class I mammalian ADH. MDRs display a broad range of activities and are distinguished from the smaller short chain dehydrogenases (~ 250 amino acids vs. the ~ 350 amino acids of the MDR). The MDR proteins have 2 domains: a C-terminal NAD(P)-binding Rossmann fold domain of a beta-alpha form and an N-terminal catalytic domain with distant homology to GroES. The MDR group contains a host of activities, including the founding alcohol dehydrogenase (ADH), quinone reductase, sorbitol dehydrogenase, formaldehyde dehydrogenase, butanediol DH, ketose reductase, cinnamyl reductase, and numerous others. The zinc-dependent alcohol dehydrogenases (ADHs) catalyze the NAD(P)(H)-dependent interconversion of alcohols to aldehydes or ketones. Active site zinc has a catalytic role, while structural zinc aids in stability. ADH-like proteins typically form dimers (typically higher plants, mammals) or tetramers (yeast, bacteria), and generally have 2 tightly bound zinc atoms per subunit. The active site zinc is coordinated by a histidine, two cysteines, and a water molecule. The second zinc seems to play a structural role, affects subunit interactions, and is typically coordinated by 4 cysteines. Length = 325

>gnl|CDD|176260 cd08300, alcohol_DH_class_III, class III alcohol dehydrogenases

 Score = 82.7 bits (205), Expect = 1e-17
 Identities = 69/234 (29%), Positives = 105/234 (44%), Gaps = 25/234 (10%)

Query: 40  VTFKVTHCGICHSDLHMIKNEWGNTIYPIVPGHEIVGVVTEVGSKVSKFKVGDKVGVGCM 99
           V  K+   G+CH+D + +       ++P++ GHE  G+V  VG  V+  K GD V +   
Sbjct: 30  VRIKILATGVCHTDAYTLSGADPEGLFPVILGHEGAGIVESVGEGVTSVKPGDHV-IPLY 88

Query: 100 VGSCRSCDSCAIDLENYCPKV-------IM-------TYANK--YH-DGTITYGGYSDIM 142
              C  C  C     N C K+       +M       +   K  YH  GT T+  Y+  +
Sbjct: 89  TPECGECKFCKSGKTNLCQKIRATQGKGLMPDGTSRFSCKGKPIYHFMGTSTFSEYT--V 146

Query: 143 VADEHFVVRIPEGTPLDATAPLLCAGITVYSPLRFYGLDKPGMHVGVVGLGGLGHVAVKF 202
           VA+   V +I    PLD    L C   T Y  +      +PG  V V GLG +G   ++ 
Sbjct: 147 VAEIS-VAKINPEAPLDKVCLLGCGVTTGYGAVLNTAKVEPGSTVAVFGLGAVGLAVIQG 205

Query: 203 AKAMGV-KVTVISTSPSKKSEAIERLGADSFLVSRDQDE-MQAAMGTM-DGIID 253
           AKA G  ++  I  +P K   A ++ GA   +  +D D+ +Q  +  M DG +D
Sbjct: 206 AKAAGASRIIGIDINPDKFELA-KKFGATDCVNPKDHDKPIQQVLVEMTDGGVD 258

Members identified as glutathione-dependent formaldehyde dehydrogenase(FDH), a member of the zinc dependent/medium chain alcohol dehydrogenase family. FDH converts formaldehyde and NAD(P) to formate and NAD(P)H. The initial step in this process the spontaneous formation of a S-(hydroxymethyl)glutathione adduct from formaldehyde and glutathione, followed by FDH-mediated oxidation (and detoxification) of the adduct to S-formylglutathione. MDH family uses NAD(H) as a cofactor in the interconversion of alcohols and aldehydes or ketones. Like many zinc-dependent alcohol dehydrogenases (ADH) of the medium chain alcohol dehydrogenase/reductase family (MDR), these FDHs form dimers, with 4 zinc ions per dimer. The medium chain alcohol dehydrogenase family (MDR) have a NAD(P)(H)-binding domain in a Rossmann fold of a beta-alpha form. The N-terminal region typically has an all-beta catalytic domain. These proteins typically form dimers (typically higher plants, mammals) or tetramers (yeast, bacteria), and have 2 tightly bound zinc atoms per subunit. Alcohol dehydrogenase in the liver converts ethanol and NAD+ to acetaldehyde and NADH, while in yeast and some other microorganisms ADH catalyzes the conversion acetaldehyde to ethanol in alcoholic fermentation. ADH is a member of the medium chain alcohol dehydrogenase family (MDR), which have a NAD(P)(H)-binding domain in a Rossmann fold of a beta-alpha form. The NAD(H)-binding region is comprised of 2 structurally similar halves, each of which contacts a mononucleotide. A GxGxxG motif after the first mononucleotide contact half allows the close contact of the coenzyme with the ADH backbone. The N-terminal catalytic domain has a distant homology to GroES. These proteins typically form dimers (typically higher plants, mammals) or tetramers (yeast, bacteria), and have 2 tightly bound zinc atoms per subunit, a catalytic zinc at the active site and a structural zinc in a lobe of the catalytic domain. NAD(H) binding occurs in the cleft between the catalytic and coenzyme-binding domains at the active site, and coenzyme binding induces a conformational closing of this cleft. Coenzyme binding typically precedes and contributes to substrate binding. Length = 368

>gnl|CDD|215378 PLN02702, PLN02702, L-idonate 5-dehydrogenase

 Score = 82.1 bits (203), Expect = 2e-17
 Identities = 75/277 (27%), Positives = 128/277 (46%), Gaps = 27/277 (9%)

Query: 25  LSPFHFSRRATGEKDVTFKVTHCGICHSDLHMIKN-EWGNTIY--PIVPGHEIVGVVTEV 81
           + PF       G  DV  ++   GIC SD+H +K     + +   P+V GHE  G++ EV
Sbjct: 31  IQPFKLP--PLGPHDVRVRMKAVGICGSDVHYLKTMRCADFVVKEPMVIGHECAGIIEEV 88

Query: 82  GSKVSKFKVGDKVGVGCMVGSCRSCDSCAIDLENYCPKVIMTYANKYHDGTITYGGYSDI 141
           GS+V    VGD+V +   + SC  C+ C     N CP++      K+      +G  ++ 
Sbjct: 89  GSEVKHLVVGDRVALEPGI-SCWRCNLCKEGRYNLCPEM------KFFATPPVHGSLANQ 141

Query: 142 MVADEHFVVRIPEGTPLDATAPLLCAGITV-YSPLRFYGLDKPGMHVGVVGLGGLGHVAV 200
           +V       ++PE   L+  A  +C  ++V     R   +  P  +V V+G G +G V +
Sbjct: 142 VVHPADLCFKLPENVSLEEGA--MCEPLSVGVHACRRANIG-PETNVLVMGAGPIGLVTM 198

Query: 201 KFAKAMGV-KVTVISTSPSKKSEAIERLGADSFLV--SRDQD------EMQAAMGT-MDG 250
             A+A G  ++ ++     + S A + LGAD  ++  +  +D      E+Q AMG  +D 
Sbjct: 199 LAARAFGAPRIVIVDVDDERLSVAKQ-LGADEIVLVSTNIEDVESEVEEIQKAMGGGIDV 257

Query: 251 IIDTVSAVHPLMPLIGLLKSQGKLVLVGAPEKPLELP 287
             D V     +   +   ++ GK+ LVG     + +P
Sbjct: 258 SFDCVGFNKTMSTALEATRAGGKVCLVGMGHNEMTVP 294

Length = 364

>gnl|CDD|176211 cd08249, enoyl_reductase_like, enoyl_reductase_like

 Score = 81.9 bits (203), Expect = 2e-17
 Identities = 63/262 (24%), Positives = 100/262 (38%), Gaps = 47/262 (17%)

Query: 43  KVTHCGICHSDLHMIKNEWGNTIYPIVPGHEIVGVVTEVGSKVSKFKVGDKVGVGCMVGS 102
           KV    +   D       +  + YP + G +  G V EVGS V++FKVGD+V  G + G 
Sbjct: 32  KVKAVALNPVDWKHQDYGFIPS-YPAILGCDFAGTVVEVGSGVTRFKVGDRV-AGFVHG- 88

Query: 103 CRSCDSCAIDLENYCPKVIMTYANKYHDGTITYGGYSDIMVADEHFVVRIPEGTPLD--A 160
                                     +      G + + +VAD     +IP+    +  A
Sbjct: 89  -------------------------GNPNDPRNGAFQEYVVADADLTAKIPDNISFEEAA 123

Query: 161 TAP--LLCAGITVYS----PLRFYGLDKPGMHVGVVGLGG---LGHVAVKFAKAMGVKVT 211
           T P  L+ A + ++     PL             V+  GG   +G +A++ AK  G K  
Sbjct: 124 TLPVGLVTAALALFQKLGLPLPPPKPSPASKGKPVLIWGGSSSVGTLAIQLAKLAGYK-- 181

Query: 212 VISTSPSKKSEAIERLGADSFLVSRD----QDEMQAAMGTMDGIIDTVSAVHPLMPLIGL 267
           VI+T+  K  + ++ LGAD+     D    +D   A  G +   +D +S           
Sbjct: 182 VITTASPKNFDLVKSLGADAVFDYHDPDVVEDIRAATGGKLRYALDCISTPESAQLCAEA 241

Query: 268 LKS--QGKLVLVGAPEKPLELP 287
           L     GKLV +    +  E  
Sbjct: 242 LGRSGGGKLVSLLPVPEETEPR 263

Member identified as possible enoyl reductase of the MDR family. 2-enoyl thioester reductase (ETR) catalyzes the NADPH-dependent dependent conversion of trans-2-enoyl acyl carrier protein/coenzyme A (ACP/CoA) to acyl-(ACP/CoA) in fatty acid synthesis. 2-enoyl thioester reductase activity has been linked in Candida tropicalis as essential in maintaining mitiochondrial respiratory function. This ETR family is a part of the medium chain dehydrogenase/reductase family, but lack the zinc coordination sites characteristic of the alcohol dehydrogenases in this family. NAD(P)(H)-dependent oxidoreductases are the major enzymes in the interconversion of alcohols and aldehydes, or ketones. Alcohol dehydrogenase in the liver converts ethanol and NAD+ to acetaldehyde and NADH, while in yeast and some other microorganisms ADH catalyzes the conversion acetaldehyde to ethanol in alcoholic fermentation. ADH is a member of the medium chain alcohol dehydrogenase family (MDR), which has a NAD(P)(H)-binding domain in a Rossmann fold of a beta-alpha form. The NAD(H)-binding region is comprised of 2 structurally similar halves, each of which contacts a mononucleotide. The N-terminal catalytic domain has a distant homology to GroES. These proteins typically form dimers (typically higher plants, mammals) or tetramers (yeast, bacteria), and have 2 tightly bound zinc atoms per subunit, a catalytic zinc at the active site, and a structural zinc in a lobe of the catalytic domain. NAD(H)-binding occurs in the cleft between the catalytic and coenzyme-binding domains at the active site, and coenzyme binding induces a conformational closing of this cleft. Coenzyme binding typically precedes and contributes to substrate binding. Candida tropicalis enoyl thioester reductase (Etr1p) catalyzes the NADPH-dependent reduction of trans-2-enoyl thioesters in mitochondrial fatty acid synthesis. Etr1p forms homodimers with each subunit containing a nucleotide-binding Rossmann fold domain and a catalytic domain. Length = 339

>gnl|CDD|176243 cd08283, FDH_like_1, Glutathione-dependent formaldehyde dehydrogenase related proteins, child 1

 Score = 79.5 bits (197), Expect = 2e-16
 Identities = 63/212 (29%), Positives = 86/212 (40%), Gaps = 26/212 (12%)

Query: 39  DVTFKVTHCGICHSDLHMIKNEWGNTIYPIVPGHEIVGVVTEVGSKVSKFKVGDKVGVGC 98
           D   +VT   IC SDLH+            + GHE +GVV EVG +V   KVGD+V V  
Sbjct: 27  DAIVRVTATAICGSDLHLYHGYIPGMKKGDILGHEFMGVVEEVGPEVRNLKVGDRV-VVP 85

Query: 99  MVGSCRSCDSCAIDLENYC----PKVIMTYANKYHDGTI-----TYGGYSD-----IMVA 144
              +C  C  C   L + C    P   M     +    I       GGY+      + V 
Sbjct: 86  FTIACGECFYCKRGLYSQCDNTNPSAEMAKLYGHAGAGIFGYSHLTGGYAGGQAEYVRVP 145

Query: 145 DEHF-VVRIPEGTPLDATAPLLCAGITVYSPLRFYGLD----KPGMHVGVVGLGGLGHVA 199
                  +IP+    D  A L  + I    P  ++  +    KPG  V V G G +G  A
Sbjct: 146 FADVGPFKIPDDLS-DEKA-LFLSDIL---PTGYHAAELAEVKPGDTVAVWGCGPVGLFA 200

Query: 200 VKFAKAMGVK-VTVISTSPSKKSEAIERLGAD 230
            + AK +G + V  I   P +   A   LGA+
Sbjct: 201 ARSAKLLGAERVIAIDRVPERLEMARSHLGAE 232

Members identified as glutathione-dependent formaldehyde dehydrogenase(FDH), a member of the zinc-dependent/medium chain alcohol dehydrogenase family. FDH converts formaldehyde and NAD(P) to formate and NAD(P)H. The initial step in this process the spontaneous formation of a S-(hydroxymethyl)glutathione adduct from formaldehyde and glutathione, followed by FDH-mediated oxidation (and detoxification) of the adduct to S-formylglutathione. MDH family uses NAD(H) as a cofactor in the interconversion of alcohols and aldehydes, or ketones. Like many zinc-dependent alcohol dehydrogenases (ADH) of the medium chain alcohol dehydrogenase/reductase family (MDR), these FDHs form dimers, with 4 zinc ions per dimer. The medium chain alcohol dehydrogenase family (MDR) has a NAD(P)(H)-binding domain in a Rossmann fold of a beta-alpha form. The N-terminal region typically has an all-beta catalytic domain. These proteins typically form dimers (typically higher plants, mammals) or tetramers (yeast, bacteria), and have 2 tightly bound zinc atoms per subunit. Length = 386

>gnl|CDD|176236 cd08275, MDR3, Medium chain dehydrogenases/reductase (MDR)/zinc-dependent alcohol dehydrogenase-like family

 Score = 79.2 bits (196), Expect = 2e-16
 Identities = 67/251 (26%), Positives = 102/251 (40%), Gaps = 53/251 (21%)

Query: 40  VTFKVTHCGICHSDLHMIKNEWGNTI-YPIVPGHEIVGVVTEVGSKVSKFKVGDKVGVGC 98
           V  +V  CG+  +DL   +  + +    P VPG E  G V  VG  V  FKVGD+V    
Sbjct: 29  VRVRVEACGLNFADLMARQGLYDSAPKPPFVPGFECAGTVEAVGEGVKDFKVGDRV---- 84

Query: 99  MVGSCRSCDSCAIDLENYCPKVIMTYANKYHDGTITYGGYSDIMVADEHFVVRIPEGTPL 158
            +G  R                              +GGY++++      V  +P+G   
Sbjct: 85  -MGLTR------------------------------FGGYAEVVNVPADQVFPLPDGMSF 113

Query: 159 DATAPLLCAGITVYSPLRFYGLDKPGMHVGV-VGLGGLGHVAVKFAKAMGVKVTVISTSP 217
           +  A      +T Y  L   G  +PG  V V    GG+G  A +  K +   VTV+ T+ 
Sbjct: 114 EEAAAFPVNYLTAYYALFELGNLRPGQSVLVHSAAGGVGLAAGQLCKTVPN-VTVVGTAS 172

Query: 218 SKKSEAIERLGADSFLVSRDQD---EM-QAAMGTMDGIIDTVSAVHPLMP-----LIGLL 268
           + K EA++  G    +  R QD   E+ + +   +D ++D       L          LL
Sbjct: 173 ASKHEALKENGVTHVIDYRTQDYVEEVKKISPEGVDIVLD------ALGGEDTRKSYDLL 226

Query: 269 KSQGKLVLVGA 279
           K  G+LV+ GA
Sbjct: 227 KPMGRLVVYGA 237

This group is a member of the medium chain dehydrogenases/reductase (MDR)/zinc-dependent alcohol dehydrogenase-like family, but lacks the zinc-binding sites of the zinc-dependent alcohol dehydrogenases. The medium chain dehydrogenases/reductase (MDR)/zinc-dependent alcohol dehydrogenase-like family, which contains the zinc-dependent alcohol dehydrogenase (ADH-Zn) and related proteins, is a diverse group of proteins related to the first identified member, class I mammalian ADH. MDRs display a broad range of activities and are distinguished from the smaller short chain dehydrogenases (~ 250 amino acids vs. the ~ 350 amino acids of the MDR). The MDR proteins have 2 domains: a C-terminal NAD(P)-binding Rossmann fold domain of a beta-alpha form and an N-terminal catalytic domain with distant homology to GroES. The MDR group contains a host of activities, including the founding alcohol dehydrogenase (ADH), quinone reductase, sorbitol dehydrogenase, formaldehyde dehydrogenase, butanediol DH, ketose reductase, cinnamyl reductase, and numerous others. The zinc-dependent alcohol dehydrogenases (ADHs) catalyze the NAD(P)(H)-dependent interconversion of alcohols to aldehydes or ketones. Active site zinc has a catalytic role, while structural zinc aids in stability. ADH-like proteins typically form dimers (typically higher plants, mammals) or tetramers (yeast, bacteria), and generally have 2 tightly bound zinc atoms per subunit. The active site zinc is coordinated by a histidine, two cysteines, and a water molecule. The second zinc seems to play a structural role, affects subunit interactions, and is typically coordinated by 4 cysteines. Length = 337

>gnl|CDD|176234 cd08273, MDR8, Medium chain dehydrogenases/reductase (MDR)/zinc-dependent alcohol dehydrogenase-like family

 Score = 78.8 bits (195), Expect = 2e-16
 Identities = 66/312 (21%), Positives = 105/312 (33%), Gaps = 66/312 (21%)

Query: 67  PIVPGHEIVGVVTEVGSKVSKFKVGDKVGVGCMVGSCRSCDSCAIDLENYCPKVIMTYAN 126
           P  PG+++VG V  +GS V+ F+VGD+V    +                           
Sbjct: 58  PFTPGYDLVGRVDALGSGVTGFEVGDRVA--ALT-------------------------- 89

Query: 127 KYHDGTITYGGYSDIMVADEHFVVRIPEGTPLDATAPLLCAGITVYSPLRFYGLDKPGMH 186
                    GG ++ +  D  ++V +PEG        L+   +T Y  L        G  
Sbjct: 90  -------RVGGNAEYINLDAKYLVPVPEGVDAAEAVCLVLNYVTAYQMLHRAAKVLTGQR 142

Query: 187 VGVVGL-GGLGHVAVKFAKAMGVKVTVISTSPSKKSEAIERLGADSFLVSRDQD--EMQA 243
           V + G  GG+G   ++ A   G    V  T+  +   A+  LGA + +  R +D      
Sbjct: 143 VLIHGASGGVGQALLELALLAG--AEVYGTASERNHAALRELGA-TPIDYRTKDWLPAML 199

Query: 244 AMGTMDGIIDTVSAVHPLMPLIGLLKSQGKLVLVGAP--------EKPLELPAFSLL--- 292
             G +D + D V            L   G LV  G                   + L   
Sbjct: 200 TPGGVDVVFDGVGGES-YEESYAALAPGGTLVCYGGNSSLLQGRRSLAALGSLLARLAKL 258

Query: 293 ----MGRKIVGGSMIGG--------MKETQEMIDFAAKHNIRADI-EVIPADYVNTALER 339
                GR+     +            ++  E++D  AK  IR  I + +P   V  A   
Sbjct: 259 KLLPTGRRATFYYVWRDRAEDPKLFRQDLTELLDLLAKGKIRPKIAKRLPLSEVAEAHRL 318

Query: 340 LAKADVRYRFVI 351
           L    V  + V+
Sbjct: 319 LESGKVVGKIVL 330

This group is a member of the medium chain dehydrogenases/reductase (MDR)/zinc-dependent alcohol dehydrogenase-like family, but lacks the zinc-binding sites of the zinc-dependent alcohol dehydrogenases. The medium chain dehydrogenases/reductase (MDR)/zinc-dependent alcohol dehydrogenase-like family, which contains the zinc-dependent alcohol dehydrogenase (ADH-Zn) and related proteins, is a diverse group of proteins related to the first identified member, class I mammalian ADH. MDRs display a broad range of activities and are distinguished from the smaller short chain dehydrogenases (~ 250 amino acids vs. the ~ 350 amino acids of the MDR). The MDR proteins have 2 domains: a C-terminal NAD(P)-binding Rossmann fold domain of a beta-alpha form and an N-terminal catalytic domain with distant homology to GroES. The MDR group contains a host of activities, including the founding alcohol dehydrogenase (ADH), quinone reductase, sorbitol dehydrogenase, formaldehyde dehydrogenase, butanediol DH, ketose reductase, cinnamyl reductase, and numerous others. The zinc-dependent alcohol dehydrogenases (ADHs) catalyze the NAD(P)(H)-dependent interconversion of alcohols to aldehydes or ketones. Active site zinc has a catalytic role, while structural zinc aids in stability. ADH-like proteins typically form dimers (typically higher plants, mammals) or tetramers (yeast, bacteria), and generally have 2 tightly bound zinc atoms per subunit. The active site zinc is coordinated by a histidine, two cysteines, and a water molecule. The second zinc seems to play a structural role, affects subunit interactions, and is typically coordinated by 4 cysteines. Length = 331

>gnl|CDD|176229 cd08268, MDR2, Medium chain dehydrogenases/reductase (MDR)/zinc-dependent alcohol dehydrogenase-like family

 Score = 77.6 bits (192), Expect = 5e-16
 Identities = 54/228 (23%), Positives = 85/228 (37%), Gaps = 42/228 (18%)

Query: 64  TIYPIVPGHEIVGVVTEVGSKVSKFKVGDKVGVGCMVGSCRSCDSCAIDLENYCPKVIMT 123
              P   G+E  GVV  VG+ V+ F VGD+V V                           
Sbjct: 55  PPLPARLGYEAAGVVEAVGAGVTGFAVGDRVSV------------IPAADLG-------- 94

Query: 124 YANKYHDGTITYGGYSDIMVADEHFVVRIPEG-TPLDATAPLLCAGITVYSPLRFYGLDK 182
                      YG Y++  +     VV++P+G + ++A A L    +T Y  L      +
Sbjct: 95  ----------QYGTYAEYALVPAAAVVKLPDGLSFVEAAA-LWMQYLTAYGALVELAGLR 143

Query: 183 PGMHVGVVGL-GGLGHVAVKFAKAMGVKVTVISTSPSKKSEAIERLGADSFLVSRDQDEM 241
           PG  V +      +G  A++ A A G  V   + +  K+   +  LGA   +V+ ++D +
Sbjct: 144 PGDSVLITAASSSVGLAAIQIANAAGATVIATTRTSEKRDALLA-LGAAHVIVTDEEDLV 202

Query: 242 QAAMGTMDG-----IIDTVSAVHPLMP-LIGLLKSQGKLVLVGAPEKP 283
              +    G     + D V    P    L   L   G LV+ GA    
Sbjct: 203 AEVLRITGGKGVDVVFDPVGG--PQFAKLADALAPGGTLVVYGALSGE 248

This group is a member of the medium chain dehydrogenases/reductase (MDR)/zinc-dependent alcohol dehydrogenase-like family, but lacks the zinc-binding sites of the zinc-dependent alcohol dehydrogenases. The medium chain dehydrogenases/reductase (MDR)/zinc-dependent alcohol dehydrogenase-like family, which contains the zinc-dependent alcohol dehydrogenase (ADH-Zn) and related proteins, is a diverse group of proteins related to the first identified member, class I mammalian ADH. MDRs display a broad range of activities and are distinguished from the smaller short chain dehydrogenases (~ 250 amino acids vs. the ~ 350 amino acids of the MDR). The MDR proteins have 2 domains: a C-terminal NAD(P)-binding Rossmann fold domain of a beta-alpha form and an N-terminal catalytic domain with distant homology to GroES. The MDR group contains a host of activities, including the founding alcohol dehydrogenase (ADH), quinone reductase, sorbitol dehydrogenase, formaldehyde dehydrogenase, butanediol DH, ketose reductase, cinnamyl reductase, and numerous others. The zinc-dependent alcohol dehydrogenases (ADHs) catalyze the NAD(P)(H)-dependent interconversion of alcohols to aldehydes or ketones. Active site zinc has a catalytic role, while structural zinc aids in stability. ADH-like proteins typically form dimers (typically higher plants, mammals) or tetramers (yeast, bacteria), and generally have 2 tightly bound zinc atoms per subunit. The active site zinc is coordinated by a histidine, two cysteines, and a water molecule. The second zinc seems to play a structural role, affects subunit interactions, and is typically coordinated by 4 cysteines. Length = 328

>gnl|CDD|131865 TIGR02818, adh_III_F_hyde, S-(hydroxymethyl)glutathione dehydrogenase/class III alcohol dehydrogenase

 Score = 77.9 bits (192), Expect = 6e-16
 Identities = 80/330 (24%), Positives = 135/330 (40%), Gaps = 33/330 (10%)

Query: 39  DVTFKVTHCGICHSDLHMIKNEWGNTIYPIVPGHEIVGVVTEVGSKVSKFKVGDKVGVGC 98
           +V  ++   G+CH+D   +       ++P++ GHE  G+V  VG  V+  KVGD V +  
Sbjct: 28  EVLVRIVATGVCHTDAFTLSGADPEGVFPVILGHEGAGIVEAVGEGVTSVKVGDHV-IPL 86

Query: 99  MVGSCRSCDSCAIDLENYCPKVIMTYANKYH-DGTITY-------------GGYSDIMVA 144
               C  C  C     N C  V  T       DGT  +               +S+  V 
Sbjct: 87  YTAECGECKFCLSGKTNLCVAVRETQGKGLMPDGTSRFSKDGQPIYHYMGCSTFSEYTVV 146

Query: 145 DEHFVVRIPEGTPLDATAPLLCAGITVYSPLRFYGLDKPGMHVGVVGLGGLGHVAVKFAK 204
            E  + +I    PL+    L C   T    +      + G  V V GLGG+G   ++ A+
Sbjct: 147 PEISLAKINPAAPLEEVCLLGCGVTTGIGAVLNTAKVEEGDTVAVFGLGGIGLSVIQGAR 206

Query: 205 AMGV-KVTVISTSPSKKSEAIERLGADSFLVSRDQDE------MQAAMGTMDGIIDTVSA 257
                ++  I  +P+ K E  ++LGA   +   D D+      ++   G +D   + +  
Sbjct: 207 MAKASRIIAIDINPA-KFELAKKLGATDCVNPNDYDKPIQEVIVEITDGGVDYSFECIGN 265

Query: 258 VHPL-MPLIGLLKSQGKLVLVGAPEKPLELPA--FSLLMGRKIVGGSMIGGMK---ETQE 311
           V+ +   L    K  G+ +++G      E+    F L+ GR +  GS  GG+K   E   
Sbjct: 266 VNVMRAALECCHKGWGESIIIGVAGAGQEISTRPFQLVTGR-VWRGSAFGGVKGRTELPG 324

Query: 312 MIDFAAKHNIRAD---IEVIPADYVNTALE 338
           +++   K  I  D      +P + +N A +
Sbjct: 325 IVEQYMKGEIALDDFVTHTMPLEDINEAFD 354

The members of this protein family show dual function. First, they remove formaldehyde, a toxic metabolite, by acting as S-(hydroxymethyl)glutathione dehydrogenase (1.1.1.284). S-(hydroxymethyl)glutathione can form spontaneously from formaldehyde and glutathione, and so this enzyme previously was designated glutathione-dependent formaldehyde dehydrogenase. These same proteins are also designated alcohol dehydrogenase (EC 1.1.1.1) of class III, for activities that do not require glutathione; they tend to show poor activity for ethanol among their various substrate alcohols [Cellular processes, Detoxification, Energy metabolism, Fermentation]. Length = 368

>gnl|CDD|234027 TIGR02824, quinone_pig3, putative NAD(P)H quinone oxidoreductase, PIG3 family

 Score = 76.5 bits (189), Expect = 1e-15
 Identities = 69/240 (28%), Positives = 101/240 (42%), Gaps = 44/240 (18%)

Query: 69  VPGHEIVGVVTEVGSKVSKFKVGDKVGVGCMVGSCRSCDSCAIDLENYCPKVIMTYANKY 128
           + G E+ G V  VG  VS++KVGD+V              CA+                 
Sbjct: 60  ILGLEVAGEVVAVGEGVSRWKVGDRV--------------CAL----------------- 88

Query: 129 HDGTITYGGYSDIMVADEHFVVRIPEGTPLDATAPLLCAGITVYSPLRFYGLDKPGMHVG 188
               +  GGY++ +      V+ +PEG  L   A L     TV+S L   G  K G  V 
Sbjct: 89  ----VAGGGYAEYVAVPAGQVLPVPEGLSLVEAAALPETFFTVWSNLFQRGGLKAGETVL 144

Query: 189 V-VGLGGLGHVAVKFAKAMGVKVTVISTSPSKKSEAIERLGADSFLVSRDQDEMQAAMGT 247
           +  G  G+G  A++ AKA G +V   + S  +K  A E LGAD  +  R++D ++     
Sbjct: 145 IHGGASGIGTTAIQLAKAFGARVFTTAGSD-EKCAACEALGADIAINYREEDFVEVVKAE 203

Query: 248 MDG-----IIDTVSAVHPLMPLIGLLKSQGKLVLVGAPE-KPLELPAFSLLMGRKIVGGS 301
             G     I+D V   + L   I  L   G++V +G    +  EL    LL  R  + GS
Sbjct: 204 TGGKGVDVILDIVGGSY-LNRNIKALALDGRIVQIGFQGGRKAELDLGPLLAKRLTITGS 262

Members of this family are putative quinone oxidoreductases that belong to the broader superfamily (modeled by Pfam pfam00107) of zinc-dependent alcohol (of medium chain length) dehydrogenases and quinone oxiooreductases. The alignment shows no motif of conserved Cys residues as are found in zinc-binding members of the superfamily, and members are likely to be quinone oxidoreductases instead. A member of this family in Homo sapiens, PIG3, is induced by p53 but is otherwise uncharacterized [Unknown function, Enzymes of unknown specificity]. Length = 325

>gnl|CDD|176230 cd08269, Zn_ADH9, Alcohol dehydrogenases of the MDR family

 Score = 75.9 bits (187), Expect = 2e-15
 Identities = 50/205 (24%), Positives = 71/205 (34%), Gaps = 56/205 (27%)

Query: 36  GEKDVTFKVTHCGICHSDLHMIKN---EWGNTIYPIVPGHEIVGVVTEVGSKVSKFKVGD 92
           G   V  +V  CG+C SDL         +     P  PGHE  G V  +G  V    VGD
Sbjct: 18  GPGQVLVRVEGCGVCGSDLPAFNQGRPWFVYPAEPGGPGHEGWGRVVALGPGVRGLAVGD 77

Query: 93  KVGVGCMVGSCRSCDSCAIDLENYCPKVIMTYANKYHDGTITYGGYSDIMVADEHFVVRI 152
           +V                                      ++ G +++  +AD    V +
Sbjct: 78  RVAG------------------------------------LSGGAFAEYDLADADHAVPL 101

Query: 153 PEGTPLDATA----PLLCA--GITVYSPLRFYGLDKPGMHVGVVGLGGLGHVAVKFAKAM 206
           P    LD  A    PL CA                  G  V V+G G +G + ++ A A 
Sbjct: 102 PSL--LDGQAFPGEPLGCALNVFRRGWIRA-------GKTVAVIGAGFIGLLFLQLAAAA 152

Query: 207 GV-KVTVISTSPSKKSEAIERLGAD 230
           G  +V  I   P++ + A   LGA 
Sbjct: 153 GARRVIAIDRRPARLALA-RELGAT 176

The medium chain dehydrogenases/reductase (MDR)/zinc-dependent alcohol dehydrogenase-like family, which contains the zinc-dependent alcohol dehydrogenase (ADH-Zn) and related proteins, is a diverse group of proteins related to the first identified member, class I mammalian ADH. MDRs display a broad range of activities and are distinguished from the smaller short chain dehydrogenases (~ 250 amino acids vs. the ~ 350 amino acids of the MDR). The MDR proteins have 2 domains: a C-terminal NAD(P)-binding Rossmann fold domain of a beta-alpha form and an N-terminal catalytic domain with distant homology to GroES. The MDR group contains a host of activities, including the founding alcohol dehydrogenase (ADH), quinone reductase, sorbitol dehydrogenase, formaldehyde dehydrogenase, butanediol DH, ketose reductase, cinnamyl reductase, and numerous others. The zinc-dependent alcohol dehydrogenases (ADHs) catalyze the NAD(P)(H)-dependent interconversion of alcohols to aldehydes or ketones. Active site zinc has a catalytic role, while structural zinc aids in stability. Length = 312

>gnl|CDD|176204 cd08242, MDR_like, Medium chain dehydrogenases/reductase (MDR)/zinc-dependent alcohol dehydrogenase-like family

 Score = 75.7 bits (187), Expect = 2e-15
 Identities = 60/231 (25%), Positives = 95/231 (41%), Gaps = 36/231 (15%)

Query: 43  KVTHCGICHSDLHMIKNEWGNTIYPIVPGHEIVGVVTEVGSKVSKFKVGDKVGVGCMVGS 102
           +V   GIC++DL + K  +    +P VPGHE VG+V E         VG +V VG +  +
Sbjct: 30  RVLLAGICNTDLEIYKGYYP---FPGVPGHEFVGIVEEGPEAEL---VGKRV-VGEINIA 82

Query: 103 CRSCDSCAIDLENYCP--KVIMTYANKYHDGTITY-GGYSDIMVADEHFVVRIPEGTPLD 159
           C  C+ C   L  +CP   V+         G +   G +++ +      +  +P+  P +
Sbjct: 83  CGRCEYCRRGLYTHCPNRTVL---------GIVDRDGAFAEYLTLPLENLHVVPDLVPDE 133

Query: 160 A---TAPLLCAG-ITVYSPLRFYGLDKPGMHVGVVGLGGLGHVAVKFAKAMGVKVTVIST 215
                 PL  A  I    P+       PG  V V+G G LG +  +     G  V ++  
Sbjct: 134 QAVFAEPLAAALEILEQVPIT------PGDKVAVLGDGKLGLLIAQVLALTGPDVVLVG- 186

Query: 216 SPSKKSEAIERLGADSFLVSRDQDEMQA------AMGTMDGIIDTVSAVHP 260
             S+K     RLG ++ L    + E         A G+  G+   +  V P
Sbjct: 187 RHSEKLALARRLGVETVLPDEAESEGGGFDVVVEATGSPSGLELALRLVRP 237

This group contains members identified as related to zinc-dependent alcohol dehydrogenase and other members of the MDR family, including threonine dehydrogenase. The medium chain dehydrogenases/reductase (MDR)/zinc-dependent alcohol dehydrogenase-like family, which contains the zinc-dependent alcohol dehydrogenase (ADH-Zn) and related proteins, is a diverse group of proteins related to the first identified member, class I mammalian ADH. MDRs display a broad range of activities and are distinguished from the smaller short chain dehydrogenases (~ 250 amino acids vs. the ~ 350 amino acids of the MDR). The MDR proteins have 2 domains: a C-terminal NAD(P) binding-Rossmann fold domain of a beta-alpha form and an N-terminal catalytic domain with distant homology to GroES. The MDR group includes various activities, including the founding alcohol dehydrogenase (ADH), quinone reductase, sorbitol dehydrogenase, formaldehyde dehydrogenase, butanediol DH, ketose reductase, cinnamyl reductase, and numerous others. The zinc-dependent alcohol dehydrogenases (ADHs) catalyze the NAD(P)(H)-dependent interconversion of alcohols to aldehydes or ketones. Active site zinc has a catalytic role, while structural zinc aids in stability. ADH-like proteins typically form dimers (typically higher plants, mammals) or tetramers (yeast, bacteria), and generally have 2 tightly bound zinc atoms per subunit. The active site zinc is coordinated by a histidine, two cysteines, and a water molecule. The second zinc seems to play a structural role, affects subunit interactions, and is typically coordinated by 4 cysteines. Length = 319

>gnl|CDD|176217 cd08255, 2-desacetyl-2-hydroxyethyl_bacteriochlorophyllide_like, 2-desacetyl-2-hydroxyethyl bacteriochlorophyllide and other MDR family members

 Score = 74.6 bits (184), Expect = 3e-15
 Identities = 57/219 (26%), Positives = 90/219 (41%), Gaps = 56/219 (25%)

Query: 67  PIVPGHEIVGVVTEVGSKVSKFKVGDKVGVGCMVGSCRSCDSCAIDLENYCPKVIMTYAN 126
           P+ PG+  VG V EVGS V+ FK GD+V                                
Sbjct: 21  PLPPGYSSVGRVVEVGSGVTGFKPGDRVFC------------------------------ 50

Query: 127 KYHDGTITYGGYSDIMVADEHFVVRIPEGTPLD--ATAPLLCAGITVYSPLRFYGLD--- 181
                   +G +++ +V   + +V +P+G P +  A   L    +         G+    
Sbjct: 51  --------FGPHAERVVVPANLLVPLPDGLPPERAALTALAATALN--------GVRDAE 94

Query: 182 -KPGMHVGVVGLGGLGHVAVKFAKAMGVKVTVISTSPSK-KSEAIERLGADSFLVSRDQD 239
            + G  V VVGLG +G +A + AKA G    V+   P   + E  E LG  +  V+ D  
Sbjct: 95  PRLGERVAVVGLGLVGLLAAQLAKAAGA-REVVGVDPDAARRELAEALGP-ADPVAADTA 152

Query: 240 EMQAAMGTMDGIIDTVSAVHPLMPLIGLLKSQGKLVLVG 278
           +     G  D +I+   +   L   + LL+ +G++VLVG
Sbjct: 153 DEIGGRG-ADVVIEASGSPSALETALRLLRDRGRVVLVG 190

This subgroup of the medium chain dehydrogenases/reductase (MDR)/zinc-dependent alcohol dehydrogenase-like family has members identified as 2-desacetyl-2-hydroxyethyl bacteriochlorophyllide A dehydrogenase and alcohol dehydrogenases. The medium chain dehydrogenases/reductase (MDR)/zinc-dependent alcohol dehydrogenase-like family, which contains the zinc-dependent alcohol dehydrogenase (ADH-Zn) and related proteins, is a diverse group of proteins related to the first identified member, class I mammalian ADH. MDRs display a broad range of activities and are distinguished from the smaller short chain dehydrogenases (~ 250 amino acids vs. the ~ 350 amino acids of the MDR). The MDR proteins have 2 domains: a C-terminal NAD(P) binding-Rossmann fold domain of a beta-alpha form and an N-terminal catalytic domain with distant homology to GroES. The MDR group contains a host of activities, including the founding alcohol dehydrogenase (ADH), quinone reductase, sorbitol dehydrogenase, formaldehyde dehydrogenase, butanediol DH, ketose reductase, cinnamyl reductase, and numerous others. The zinc-dependent alcohol dehydrogenases (ADHs) catalyze the NAD(P)(H)-dependent interconversion of alcohols to aldehydes or ketones. Active site zinc has a catalytic role, while structural zinc aids in stability. Length = 277

>gnl|CDD|132492 TIGR03451, mycoS_dep_FDH, S-(hydroxymethyl)mycothiol dehydrogenase

 Score = 74.1 bits (182), Expect = 1e-14
 Identities = 80/288 (27%), Positives = 115/288 (39%), Gaps = 35/288 (12%)

Query: 36  GEKDVTFKVTHCGICHSDLHMIKNEWGNTIYPIVPGHEIVGVVTEVGSKVSKFKVGDKVG 95
           G  +V   +  CG+CH+DLH  +    N  +P + GHE  GVV  VG  V+    GD V 
Sbjct: 25  GPGEVIVDIQACGVCHTDLHY-REGGINDEFPFLLGHEAAGVVEAVGEGVTDVAPGDYVV 83

Query: 96  VG--CMVGSCRSCDS-----CAIDLENYCPKVIMTYANKYHDGT-----ITYGGYSDIMV 143
           +    + G CR+C       C  D  N   K+ +T      DGT     +  G +++  +
Sbjct: 84  LNWRAVCGQCRACKRGRPWYC-FDTHNATQKMTLT------DGTELSPALGIGAFAEKTL 136

Query: 144 ADEHFVVRI-PEGTPLDATAPLLCAGITV-YSPLRFYGLDKPGMHVGVVGLGGLGHVAVK 201
                  ++ P   P  A A LL  G+          G  K G  V V+G GG+G  A+ 
Sbjct: 137 VHAGQCTKVDPAADP--AAAGLLGCGVMAGLGAAVNTGGVKRGDSVAVIGCGGVGDAAIA 194

Query: 202 FAKAMGVKVTVISTSPSKKSEAIERLGADSFLVSRDQDEMQAAMGTMDG-----IIDTVS 256
            A   G    +      +K E     GA   + S   D ++A      G     +ID V 
Sbjct: 195 GAALAGASKIIAVDIDDRKLEWAREFGATHTVNSSGTDPVEAIRALTGGFGADVVIDAVG 254

Query: 257 AVHPLMPLIGLLKSQGKLVLVGAP--EKPLELPAFSLLMGRKIVGGSM 302
                          G +VLVG P  +  LELP   +  GR   GG++
Sbjct: 255 RPETYKQAFYARDLAGTVVLVGVPTPDMTLELPLLDVF-GR---GGAL 298

Members of this protein family are mycothiol-dependent formaldehyde dehydrogenase (EC 1.2.1.66). This protein is found, so far, only in the Actinobacteria (Mycobacterium sp., Streptomyces sp., Corynebacterium sp., and related species), where mycothione replaces glutathione [Cellular processes, Detoxification]. Length = 358

>gnl|CDD|176184 cd05281, TDH, Threonine dehydrogenase

 Score = 73.4 bits (181), Expect = 2e-14
 Identities = 71/263 (26%), Positives = 119/263 (45%), Gaps = 28/263 (10%)

Query: 36  GEKDVTFKVTHCGICHSDLHMIK-NEW--GNTIYPIVPGHEIVGVVTEVGSKVSKFKVGD 92
           G  +V  KV    IC +D+H+ + +EW       P++ GHE  G V EVG  V++ KVGD
Sbjct: 24  GPGEVLIKVLAASICGTDVHIYEWDEWAQSRIKPPLIFGHEFAGEVVEVGEGVTRVKVGD 83

Query: 93  KVGVGCMVGSCRSCDSCAIDLENYCPKV-IMTYANKYHDGTITYGGYSDIMVADEHFVVR 151
            V     +  C  C  C     + C    I+        G  T G +++ +V  E  + +
Sbjct: 84  YVSAETHI-VCGKCYQCRTGNYHVCQNTKIL--------GVDTDGCFAEYVVVPEENLWK 134

Query: 152 IPEGTPLDATA---PLLCAGITVYSPLRFYGLDKPGMHVGVVGLGGLGHVAVKFAKAMGV 208
             +  P +  +   PL  A  TV +       D  G  V + G G +G +A+  AKA G 
Sbjct: 135 NDKDIPPEIASIQEPLGNAVHTVLAG------DVSGKSVLITGCGPIGLMAIAVAKAAGA 188

Query: 209 KVTVISTSPSKKSEAIER-LGADSFLVSRDQDEMQAAMGTMDGIIDTV--SAVHPLMPLI 265
              VI++ P+     + + +GAD  +  R++D ++    T    +D V   + +P     
Sbjct: 189 -SLVIASDPNPYRLELAKKMGADVVINPREEDVVEVKSVTDGTGVDVVLEMSGNPKAIEQ 247

Query: 266 GL--LKSQGKLVLVGAPEKPLEL 286
           GL  L   G++ ++G P  P+++
Sbjct: 248 GLKALTPGGRVSILGLPPGPVDI 270

L-threonine dehydrogenase (TDH) catalyzes the zinc-dependent formation of 2-amino-3-ketobutyrate from L-threonine via NAD(H)- dependent oxidation. THD is a member of the zinc-requiring, medium chain NAD(H)-dependent alcohol dehydrogenase family (MDR). MDRs have a NAD(P)(H)-binding domain in a Rossmann fold of a beta-alpha form. NAD(P)(H)-dependent oxidoreductases are the major enzymes in the interconversion of alcohols and aldehydes, or ketones. The N-terminal region typically has an all-beta catalytic domain. These proteins typically form dimers (typically higher plants, mammals) or tetramers (yeast, bacteria) and have 2 tightly bound zinc atoms per subunit. Sorbitol and aldose reductase are NAD(+) binding proteins of the polyol pathway, which interconverts glucose and fructose. Length = 341

>gnl|CDD|176223 cd08262, Zn_ADH8, Alcohol dehydrogenases of the MDR family

 Score = 73.1 bits (180), Expect = 2e-14
 Identities = 61/231 (26%), Positives = 86/231 (37%), Gaps = 38/231 (16%)

Query: 36  GEKDVTFKVTHCGICHSDLH-------MIKNEWGNTIY----PIVPGHEIVGVVTEVGSK 84
           G   V  KV  CGIC SDLH       M+ +  G ++      IV GHE  G V + G  
Sbjct: 22  GPGQVLVKVLACGICGSDLHATAHPEAMVDDAGGPSLMDLGADIVLGHEFCGEVVDYGPG 81

Query: 85  VS-KFKVGDKVGVGCMVGSCRSCDSCAIDLENYCPKVIMTYANKYHDGTITYGGYSDIMV 143
              K KVG +V     +  C    SC I L                      GGY++ M+
Sbjct: 82  TERKLKVGTRV-TSLPLLLCGQGASCGIGL-----------------SPEAPGGYAEYML 123

Query: 144 ADEHFVVRIPEGTPLDATA---PLLCAGITVYSPLRFYGLDKPGMHVGVVGLGGLGHVAV 200
             E  ++R+P+G  ++  A   PL          +R   L  PG    V+G G +G   +
Sbjct: 124 LSEALLLRVPDGLSMEDAALTEPLAVG----LHAVRRARL-TPGEVALVIGCGPIGLAVI 178

Query: 201 KFAKAMGVKVTVISTSPSKKSEAIERLGADSFLVSRDQDEMQAAMGTMDGI 251
              KA GV   V S    ++      +GAD  +         A    +   
Sbjct: 179 AALKARGVGPIVASDFSPERRALALAMGADIVVDPAADSPFAAWAAELARA 229

The medium chain dehydrogenases/reductase (MDR)/zinc-dependent alcohol dehydrogenase-like family, which contains the zinc-dependent alcohol dehydrogenase (ADH-Zn) and related proteins, is a diverse group of proteins related to the first identified member, class I mammalian ADH. MDRs display a broad range of activities and are distinguished from the smaller short chain dehydrogenases (~ 250 amino acids vs. the ~ 350 amino acids of the MDR). The MDR proteins have 2 domains: a C-terminal NAD(P)-binding Rossmann fold domain of a beta-alpha form and an N-terminal catalytic domain with distant homology to GroES. The MDR group contains a host of activities, including the founding alcohol dehydrogenase (ADH), quinone reductase, sorbitol dehydrogenase, formaldehyde dehydrogenase, butanediol DH, ketose reductase, cinnamyl reductase, and numerous others. The zinc-dependent alcohol dehydrogenases (ADHs) catalyze the NAD(P)(H)-dependent interconversion of alcohols to aldehydes or ketones. Active site zinc has a catalytic role, while structural zinc aids in stability. ADH-like proteins typically form dimers (typically higher plants, mammals) or tetramers (yeast, bacteria), and generally have 2 tightly bound zinc atoms per subunit. The active site zinc is coordinated by a histidine, two cysteines, and a water molecule. The second zinc seems to play a structural role, affects subunit interactions, and is typically coordinated by 4 cysteines. Length = 341

>gnl|CDD|176180 cd05276, p53_inducible_oxidoreductase, PIG3 p53-inducible quinone oxidoreductase

 Score = 72.9 bits (180), Expect = 2e-14
 Identities = 61/218 (27%), Positives = 90/218 (41%), Gaps = 43/218 (19%)

Query: 67  PIVPGHEIVGVVTEVGSKVSKFKVGDKVGVGCMVGSCRSCDSCAIDLENYCPKVIMTYAN 126
             + G E+ GVV  VG  V+ +KVGD+V              CA+               
Sbjct: 58  SDILGLEVAGVVVAVGPGVTGWKVGDRV--------------CAL--------------- 88

Query: 127 KYHDGTITYGGYSDIMVADEHFVVRIPEGTPLDATAPLLCAGITVYSPLRFYGLDKPGMH 186
                 +  GGY++ +V     ++ +PEG  L   A L     T +  L   G  K G  
Sbjct: 89  ------LAGGGYAEYVVVPAGQLLPVPEGLSLVEAAALPEVFFTAWQNLFQLGGLKAGET 142

Query: 187 VGV-VGLGGLGHVAVKFAKAMGVKVTVISTSPSKKSEAIERLGADSFLVSRDQDEMQAAM 245
           V +  G  G+G  A++ AKA+G +V   + S   K EA   LGAD  +  R +D  +   
Sbjct: 143 VLIHGGASGVGTAAIQLAKALGARVIATAGSEE-KLEACRALGADVAINYRTEDFAEEVK 201

Query: 246 GTMDG-----IIDTVSAVHPLMPLIGLLKSQGKLVLVG 278
               G     I+D V   + L   +  L   G+LVL+G
Sbjct: 202 EATGGRGVDVILDMVGGDY-LARNLRALAPDGRLVLIG 238

PIG3 p53-inducible quinone oxidoreductase, a medium chain dehydrogenase/reductase family member, acts in the apoptotic pathway. PIG3 reduces ortho-quinones, but its apoptotic activity has been attributed to oxidative stress generation, since overexpression of PIG3 accumulates reactive oxygen species. PIG3 resembles the MDR family member quinone reductases, which catalyze the reduction of quinone to hydroxyquinone. NAD(P)(H)-dependent oxidoreductases are the major enzymes in the interconversion of alcohols and aldehydes or ketones. Alcohol dehydrogenase in the liver converts ethanol and NAD+ to acetaldehyde and NADH, while in yeast and some other microorganisms ADH catalyzes the conversion acetaldehyde to ethanol in alcoholic fermentation. ADH is a member of the medium chain alcohol dehydrogenase family (MDR), which has a NAD(P)(H)-binding domain in a Rossmann fold of a beta-alpha form. The NAD(H)-binding region is comprised of 2 structurally similar halves, each of which contacts a mononucleotide. A GxGxxG motif after the first mononucleotide contact half allows the close contact of the coenzyme with the ADH backbone. The N-terminal catalytic domain has a distant homology to GroES. These proteins typically form dimers (typically higher plants, mammals) or tetramers (yeast, bacteria), and have 2 tightly bound zinc atoms per subunit, a catalytic zinc at the active site, and a structural zinc in a lobe of the catalytic domain. NAD(H) binding occurs in the cleft between the catalytic and coenzyme-binding domains at the active site, and coenzyme binding induces a conformational closing of this cleft. Coenzyme binding typically precedes and contributes to substrate binding. In human ADH catalysis, the zinc ion helps coordinate the alcohol, followed by deprotonation of a histidine, the ribose of NAD, a serine, then the alcohol, which allows the transfer of a hydride to NAD+, creating NADH and a zinc-bound aldehyde or ketone. In yeast and some bacteria, the active site zinc binds an aldehyde, polarizing it, and leading to the reverse reaction. Length = 323

>gnl|CDD|176179 cd05195, enoyl_red, enoyl reductase of polyketide synthase

 Score = 72.2 bits (178), Expect = 2e-14
 Identities = 48/206 (23%), Positives = 73/206 (35%), Gaps = 50/206 (24%)

Query: 39  DVTFKVTHCGICHSDLHMIKNEWGNTIYPIVPGHEIVGVVTEVGSKVSKFKVGDKVGVGC 98
           +V  +V   G+   D+ +              G E  G+VT VGS V+  KVGD+V    
Sbjct: 2   EVEVEVKAAGLNFRDVLVALGL--LPGDETPLGLECSGIVTRVGSGVTGLKVGDRV---M 56

Query: 99  MVGSCRSCDSCAIDLENYCPKVIMTYANKYHDGTITYGGYSDIMVADEHFVVRIPEGTPL 158
            +                                   G ++  +  D   VV+IP+    
Sbjct: 57  GLAP---------------------------------GAFATHVRVDARLVVKIPDSLSF 83

Query: 159 DATAPLLCAGITVYSPLRFYGLD-----KPGMHVGVV-GLGGLGHVAVKFAKAMGVKVTV 212
           +  A L  A +T Y     Y L      + G  V +    GG+G  A++ A+ +G +V  
Sbjct: 84  EEAATLPVAYLTAY-----YALVDLARLQKGESVLIHAAAGGVGQAAIQLAQHLGAEVFA 138

Query: 213 ISTSPSKKSEAIERLG-ADSFLVSRD 237
              S  K+    E  G  D    SRD
Sbjct: 139 TVGSEEKREFLRELGGPVDHIFSSRD 164

Putative enoyl reductase of polyketide synthase. Polyketide synthases produce polyketides in step by step mechanism that is similar to fatty acid synthesis. Enoyl reductase reduces a double to single bond. Erythromycin is one example of a polyketide generated by 3 complex enzymes (megasynthases). 2-enoyl thioester reductase (ETR) catalyzes the NADPH-dependent dependent conversion of trans-2-enoyl acyl carrier protein/coenzyme A (ACP/CoA) to acyl-(ACP/CoA) in fatty acid synthesis. 2-enoyl thioester reductase activity has been linked in Candida tropicalis as essential in maintaining mitiochondrial respiratory function. This ETR family is a part of the medium chain dehydrogenase/reductase family, but lack the zinc coordination sites characteristic of the alcohol dehydrogenases in this family. NAD(P)(H)-dependent oxidoreductases are the major enzymes in the interconversion of alcohols and aldehydes or ketones. Alcohol dehydrogenase in the liver converts ethanol and NAD+ to acetaldehyde and NADH, while in yeast and some other microorganisms ADH catalyzes the conversion acetaldehyde to ethanol in alcoholic fermentation. ADH is a member of the medium chain alcohol dehydrogenase family (MDR), which has a NAD(P)(H)-binding domain in a Rossmann fold of a beta-alpha form. The NAD(H)-binding region is comprised of 2 structurally similar halves, each of which contacts a mononucleotide. The N-terminal catalytic domain has a distant homology to GroES. These proteins typically form dimers (typically higher plants, mammals) or tetramers (yeast, bacteria), and have 2 tightly bound zinc atoms per subunit, a catalytic zinc at the active site, and a structural zinc in a lobe of the catalytic domain. NAD(H) binding occurs in the cleft between the catalytic and coenzyme-binding domains, at the active site, and coenzyme binding induces a conformational closing of this cleft. Coenzyme binding typically precedes and contributes to substrate binding. Length = 293

>gnl|CDD|176233 cd08272, MDR6, Medium chain dehydrogenases/reductase (MDR)/zinc-dependent alcohol dehydrogenase-like family

 Score = 72.6 bits (179), Expect = 2e-14
 Identities = 48/170 (28%), Positives = 71/170 (41%), Gaps = 43/170 (25%)

Query: 67  PIVPGHEIVGVVTEVGSKVSKFKVGDKV-----GVGCMVGSCRSCDSCAIDLENYCPKVI 121
           P + G ++ GVV  VG  V++F+VGD+V     G+G + GS                   
Sbjct: 58  PAILGCDVAGVVEAVGEGVTRFRVGDEVYGCAGGLGGLQGS------------------- 98

Query: 122 MTYANKYHDGTITYGGYSDIMVADEHFVVRIPEGTPLDATAPLLCAGITVYSPLRFYGLD 181
                            ++  V D   +   P    +   A L   GIT +  L      
Sbjct: 99  ----------------LAEYAVVDARLLALKPANLSMREAAALPLVGITAWEGLVDRAAV 142

Query: 182 KPGMHVGVV-GLGGLGHVAVKFAKAMGVKVTVISTSPSKKSEAIERLGAD 230
           + G  V +  G GG+GHVAV+ AKA G +  V +T+ S+K+     LGAD
Sbjct: 143 QAGQTVLIHGGAGGVGHVAVQLAKAAGAR--VYATASSEKAAFARSLGAD 190

This group is a member of the medium chain dehydrogenases/reductase (MDR)/zinc-dependent alcohol dehydrogenase-like family, but lacks the zinc-binding sites of the zinc-dependent alcohol dehydrogenases. The medium chain dehydrogenases/reductase (MDR)/zinc-dependent alcohol dehydrogenase-like family, which contains the zinc-dependent alcohol dehydrogenase (ADH-Zn) and related proteins, is a diverse group of proteins related to the first identified member, class I mammalian ADH. MDRs display a broad range of activities and are distinguished from the smaller short chain dehydrogenases (~ 250 amino acids vs. the ~ 350 amino acids of the MDR). The MDR proteins have 2 domains: a C-terminal NAD(P)-binding Rossmann fold domain of a beta-alpha form and an N-terminal catalytic domain with distant homology to GroES. The MDR group contains a host of activities, including the founding alcohol dehydrogenase (ADH), quinone reductase, sorbitol dehydrogenase, formaldehyde dehydrogenase, butanediol DH, ketose reductase, cinnamyl reductase, and numerous others. The zinc-dependent alcohol dehydrogenases (ADHs) catalyze the NAD(P)(H)-dependent interconversion of alcohols to aldehydes or ketones. Active site zinc has a catalytic role, while structural zinc aids in stability. ADH-like proteins typically form dimers (typically higher plants, mammals) or tetramers (yeast, bacteria), and generally have 2 tightly bound zinc atoms per subunit. The active site zinc is coordinated by a histidine, two cysteines, and a water molecule. The second zinc seems to play a structural role, affects subunit interactions, and is typically coordinated by 4 cysteines. Length = 326

>gnl|CDD|176645 cd05282, ETR_like, 2-enoyl thioester reductase-like

 Score = 71.9 bits (177), Expect = 4e-14
 Identities = 58/238 (24%), Positives = 86/238 (36%), Gaps = 44/238 (18%)

Query: 49  ICHSDLHMIKNEWGNTI-YPIVPGHEIVGVVTEVGSKVSKFKVGDKVGVGCMVGSCRSCD 107
           I  SDL  I   +G+    P VPG+E VGVV EVGS VS   VG +V     +G      
Sbjct: 38  INPSDLITISGAYGSRPPLPAVPGNEGVGVVVEVGSGVSGLLVGQRV---LPLGG----- 89

Query: 108 SCAIDLENYCPKVIMTYANKYHDGTITYGGYSDIMVADEHFVVRIPEGTPLDATAPLLCA 167
                                       G + + +VA    ++ +P+    +  A L   
Sbjct: 90  ---------------------------EGTWQEYVVAPADDLIPVPDSISDEQAAMLYIN 122

Query: 168 GITVYSPLRFYGLDKPGMHVGVVGLG-GLGHVAVKFAKAMGVKVTVISTSPSKKSEAIER 226
            +T +  L  Y    PG  V        +G + ++ AK +G K   +     +  E ++ 
Sbjct: 123 PLTAWLMLTEYLKLPPGDWVIQNAANSAVGRMLIQLAKLLGFKTINVVRRDEQVEE-LKA 181

Query: 227 LGADSFLVSRDQDEMQAAM-----GTMDGIIDTVSAVHPLMPLIGLLKSQGKLVLVGA 279
           LGAD  + S  +D  Q              +D V        L   L+  G LV  G 
Sbjct: 182 LGADEVIDSSPEDLAQRVKEATGGAGARLALDAVGGESAT-RLARSLRPGGTLVNYGL 238

2-enoyl thioester reductase (ETR) catalyzes the NADPH-dependent conversion of trans-2-enoyl acyl carrier protein/coenzyme A (ACP/CoA) to acyl-(ACP/CoA) in fatty acid synthesis. 2-enoyl thioester reductase activity has been linked in Candida tropicalis as essential in maintaining mitiochondrial respiratory function. This ETR family is a part of the medium chain dehydrogenase/reductase family, but lack the zinc coordination sites characteristic of the alcohol dehydrogenases in this family. NAD(P)(H)-dependent oxidoreductases are the major enzymes in the interconversion of alcohols and aldehydes, or ketones. Alcohol dehydrogenase in the liver converts ethanol and NAD+ to acetaldehyde and NADH, while in yeast and some other microorganisms ADH catalyzes the conversion acetaldehyde to ethanol in alcoholic fermentation. ADH is a member of the medium chain alcohol dehydrogenase family (MDR), which has a NAD(P)(H)-binding domain in a Rossmann fold of a beta-alpha form. The NAD(H)-binding region is comprised of 2 structurally similar halves, each of which contacts a mononucleotide. The N-terminal catalytic domain has a distant homology to GroES. These proteins typically form dimers (typically higher plants, mammals) or tetramers (yeast, bacteria), and have 2 tightly bound zinc atoms per subunit, a catalytic zinc at the active site and a structural zinc in a lobe of the catalytic domain. NAD(H) binding occurs in the cleft between the catalytic and coenzyme-binding domains at the active site, and coenzyme binding induces a conformational closing of this cleft. Coenzyme binding typically precedes and contributes to substrate binding. Candida tropicalis enoyl thioester reductase (Etr1p) catalyzes the NADPH-dependent reduction of trans-2-enoyl thioesters in mitochondrial fatty acid synthesis. Etr1p forms homodimers with each subunit containing a nucleotide-binding Rossmann fold domain and a catalytic domain. Length = 323

>gnl|CDD|176245 cd08285, NADP_ADH, NADP(H)-dependent alcohol dehydrogenases

 Score = 72.3 bits (178), Expect = 4e-14
 Identities = 76/321 (23%), Positives = 118/321 (36%), Gaps = 57/321 (17%)

Query: 11  KNAFGWAAKDTSGVLSPFHFSRRATGEKDVTFKVTHCGICHSDLHMIKNEWGNTIYPIVP 70
               GW  K                G  D   + T    C SD+H +        + ++ 
Sbjct: 9   IGKVGWIEKP-----------IPVCGPNDAIVRPTAVAPCTSDVHTVWGGAPGERHGMIL 57

Query: 71  GHEIVGVVTEVGSKVSKFKVGDKVGVGCMVGSCRSCDSCAIDLENYCPKVIMTYANKYHD 130
           GHE VGVV EVGS+V  FK GD+V V   +       +     +   P            
Sbjct: 58  GHEAVGVVEEVGSEVKDFKPGDRVIVPA-ITPDWRSVAA----QRGYPS---------QS 103

Query: 131 GTITYGGY--SDIM--VADEHFVV--------RIPEGTPLDATAPLLCAGITVYSPLRFY 178
           G +  GG+  S+    V  E+F V         +P+G   D  A +L   ++      F+
Sbjct: 104 GGML-GGWKFSNFKDGVFAEYFHVNDADANLAPLPDGLT-DEQAVMLPDMMST----GFH 157

Query: 179 GLD----KPGMHVGVVGLGGLGHVAVKFAKAMGVKVTVISTSPSKKSEAIERLGADSFLV 234
           G +    K G  V V G+G +G +AV  A+  G    +   S   + E  +  GA   + 
Sbjct: 158 GAELANIKLGDTVAVFGIGPVGLMAVAGARLRGAGRIIAVGSRPNRVELAKEYGATDIVD 217

Query: 235 SRDQDEMQAAMGTMDG-----IIDTVSAVHPLMPLIGLLKSQGKLVLVGAPEKPLELP-- 287
            ++ D ++  +    G     +I            + +LK  G +  V    +   LP  
Sbjct: 218 YKNGDVVEQILKLTGGKGVDAVIIAGGGQDTFEQALKVLKPGGTISNVNYYGEDDYLPIP 277

Query: 288 --AFSLLMGRK-IVGGSMIGG 305
              + + MG K I GG   GG
Sbjct: 278 REEWGVGMGHKTINGGLCPGG 298

This group is predominated by atypical alcohol dehydrogenases; they exist as tetramers and exhibit specificity for NADP(H) as a cofactor in the interconversion of alcohols and aldehydes, or ketones. Like other zinc-dependent alcohol dehydrogenases (ADH) of the medium chain alcohol dehydrogenase/reductase family (MDR), tetrameric ADHs have a catalytic zinc that resides between the catalytic and NAD(H)binding domains; however, they do not have and a structural zinc in a lobe of the catalytic domain. The medium chain alcohol dehydrogenase family (MDR) has a NAD(P)(H)-binding domain in a Rossmann fold of a beta-alpha form. The N-terminal region typically has an all-beta catalytic domain. These proteins typically form dimers (typically higher plants, mammals) or tetramers (yeast, bacteria), and have 2 tightly bound zinc atoms per subunit. Length = 351

>gnl|CDD|176215 cd08253, zeta_crystallin, Zeta-crystallin with NADP-dependent quinone reductase activity (QOR)

 Score = 71.8 bits (177), Expect = 4e-14
 Identities = 60/234 (25%), Positives = 96/234 (41%), Gaps = 40/234 (17%)

Query: 67  PIVPGHEIVGVVTEVGSKVSKFKVGDKVGVGCMVGSCRSCDSCAIDLENYCPKVIMTYAN 126
           P VPG +  GVV  VG  V   KVGD+V +   +G  R                      
Sbjct: 58  PYVPGSDGAGVVEAVGEGVDGLKVGDRVWL-TNLGWGRR--------------------- 95

Query: 127 KYHDGTITYGGYSDIMVADEHFVVRIPEGTPLDATAPLLCAGITVYSPLRFYGLDKPGMH 186
                    G  ++ +V     +V +P+G   +  A L    +T Y  L      K G  
Sbjct: 96  --------QGTAAEYVVVPADQLVPLPDGVSFEQGAALGIPALTAYRALFHRAGAKAGET 147

Query: 187 VGVVG-LGGLGHVAVKFAKAMGVKVTVIST-SPSKKSEAIERLGADSFLVSRDQDEMQAA 244
           V V G  G +GH AV+ A+  G    VI+T S ++ +E + + GAD+    R +D     
Sbjct: 148 VLVHGGSGAVGHAAVQLARWAG--ARVIATASSAEGAELVRQAGADAVFNYRAEDLADRI 205

Query: 245 MGTMDG-----IIDTVSAVHPLMPLIGLLKSQGKLVLVGAPEKPLELPAFSLLM 293
           +    G     II+ ++ V+ L   + +L   G++V+ G+      +P   L+ 
Sbjct: 206 LAATAGQGVDVIIEVLANVN-LAKDLDVLAPGGRIVVYGSGGLRGTIPINPLMA 258

Zeta-crystallin is a eye lens protein with NADP-dependent quinone reductase activity (QOR). It has been cited as a structural component in mammalian eyes, but also has homology to quinone reductases in unrelated species. QOR catalyzes the conversion of a quinone and NAD(P)H to a hydroquinone and NAD(P+. Quinones are cyclic diones derived from aromatic compounds. Membrane bound QOR acts in the respiratory chains of bacteria and mitochondria, while soluble QOR acts to protect from toxic quinones (e.g. DT-diaphorase) or as a soluble eye-lens protein in some vertebrates (e.g. zeta-crystalin). QOR reduces quinones through a semi-quinone intermediate via a NAD(P)H-dependent single electron transfer. QOR is a member of the medium chain dehydrogenase/reductase family, but lacks the zinc-binding sites of the prototypical alcohol dehydrogenases of this group. Alcohol dehydrogenase in the liver converts ethanol and NAD+ to acetaldehyde and NADH, while in yeast and some other microorganisms ADH catalyzes the conversion acetaldehyde to ethanol in alcoholic fermentation. ADH is a member of the medium chain alcohol dehydrogenase family (MDR), which has a NAD(P)(H)-binding domain in a Rossmann fold of a beta-alpha form. The NAD(H)-binding region is comprised of 2 structurally similar halves, each of which contacts a mononucleotide. The N-terminal catalytic domain has a distant homology to GroES. These proteins typically form dimers (typically higher plants, mammals) or tetramers (yeast, bacteria), and have 2 tightly bound zinc atoms per subunit, a catalytic zinc at the active site, and a structural zinc in a lobe of the catalytic domain. NAD(H)-binding occurs in the cleft between the catalytic and coenzyme-binding domains at the active site, and coenzyme binding induces a conformational closing of this cleft. Coenzyme binding typically precedes and contributes to substrate binding. In human ADH catalysis, the zinc ion helps coordinate the alcohol, followed by deprotonation of a histidine, the ribose of NAD, a serine, then the alcohol, which allows the transfer of a hydride to NAD+, creating NADH and a zinc-bound aldehyde or ketone. In yeast and some bacteria, the active site zinc binds an aldehyde, polarizing it, and leading to the reverse reaction. Length = 325

>gnl|CDD|178341 PLN02740, PLN02740, Alcohol dehydrogenase-like

 Score = 72.5 bits (178), Expect = 4e-14
 Identities = 85/312 (27%), Positives = 124/312 (39%), Gaps = 39/312 (12%)

Query: 39  DVTFKVTHCGICHSDLHMIKNE-WGNTIYPIVPGHEIVGVVTEVGSKVSKFKVGDKVGVG 97
           +V  K+ +  ICH+DL   K E      YP + GHE  G+V  VG  V   K GD V + 
Sbjct: 37  EVRIKILYTSICHTDLSAWKGENEAQRAYPRILGHEAAGIVESVGEGVEDLKAGDHV-IP 95

Query: 98  CMVGSCRSCDSCAIDLENYCP-------KVIMTYANK------------YHD-GTITYGG 137
              G C  C  C  D  N C        K +M    K            YH   T T+  
Sbjct: 96  IFNGECGDCRYCKRDKTNLCETYRVDPFKSVMVNDGKTRFSTKGDGQPIYHFLNTSTFTE 155

Query: 138 YSDIMVADEHFVVRIPEGTPLDATAPLLCAGITVYSPLRFYGLD-KPGMHVGVVGLGGLG 196
           Y+   V D   VV+I    PL   + L C G++      +   + + G  V + GLG +G
Sbjct: 156 YT---VLDSACVVKIDPNAPLKKMSLLSC-GVSTGVGAAWNTANVQAGSSVAIFGLGAVG 211

Query: 197 HVAVKFAKAMGV-KVTVISTSPSKKSEAIERLGADSFLVSRDQDE------MQAAMGTMD 249
               + A+A G  K+  +  +P K  +  E +G   F+  +D D+       +   G +D
Sbjct: 212 LAVAEGARARGASKIIGVDINPEKFEKGKE-MGITDFINPKDSDKPVHERIREMTGGGVD 270

Query: 250 GIIDTVSAVHPLM-PLIGLLKSQGKLVLVGAPEKPLELP--AFSLLMGRKIVGGSMIGGM 306
              +    V  L    +      G  VL+G    P  LP     L  GR I  GS+ G  
Sbjct: 271 YSFECAGNVEVLREAFLSTHDGWGLTVLLGIHPTPKMLPLHPMELFDGRSIT-GSVFGDF 329

Query: 307 KETQEMIDFAAK 318
           K   ++ + A +
Sbjct: 330 KGKSQLPNLAKQ 341

Length = 381

>gnl|CDD|176226 cd08265, Zn_ADH3, Alcohol dehydrogenases of the MDR family

 Score = 71.8 bits (176), Expect = 8e-14
 Identities = 59/209 (28%), Positives = 91/209 (43%), Gaps = 24/209 (11%)

Query: 37  EKDVTFKVTHCGICHSDLHMIKNEW-------GNTIYPIVPGHEIVGVVTEVGSKVSKFK 89
             ++  +V  CGIC SD+H+ + +        G T +P+V GHE  GVV + G  V  F+
Sbjct: 51  PDEILIRVKACGICGSDIHLYETDKDGYILYPGLTEFPVVIGHEFSGVVEKTGKNVKNFE 110

Query: 90  VGDKVGVGCMVGSCRSCDSCAIDLENYCPKVIMTYANKYHDGTITYGGYSDIMVADEHFV 149
            GD V    M+  C  C +C     N+C  +     +   D     G +++ +  +  + 
Sbjct: 111 KGDPVTAEEMMW-CGMCRACRSGSPNHCKNLKELGFS--AD-----GAFAEYIAVNARYA 162

Query: 150 VRIPEGTPLDATAPLLCAGITVYSPLRFY-------GLDKPGMHVGVVGLGGLGHVAVKF 202
             I E   + +      AG  V      Y       G  +PG +V V G G +G  A+  
Sbjct: 163 WEINELREIYSEDKAFEAGALVEPTSVAYNGLFIRGGGFRPGAYVVVYGAGPIGLAAIAL 222

Query: 203 AKAMGV-KVTVISTSPSKKSEAIERLGAD 230
           AKA G  KV     S  +++ A E +GAD
Sbjct: 223 AKAAGASKVIAFEISEERRNLAKE-MGAD 250

This group resembles the zinc-dependent alcohol dehydrogenase and has the catalytic and structural zinc-binding sites characteristic of this group. The medium chain dehydrogenases/reductase (MDR)/zinc-dependent alcohol dehydrogenase-like family, which contains the zinc-dependent alcohol dehydrogenase (ADH-Zn) and related proteins, is a diverse group of proteins related to the first identified member, class I mammalian ADH. MDRs display a broad range of activities and are distinguished from the smaller short chain dehydrogenases (~ 250 amino acids vs. the ~ 350 amino acids of the MDR). The MDR proteins have 2 domains: a C-terminal NAD(P) binding-Rossmann fold domain of a beta-alpha form and an N-terminal catalytic domain with distant homology to GroES. The MDR group contains a host of activities, including the founding alcohol dehydrogenase (ADH), quinone reductase, sorbitol dehydrogenase, formaldehyde dehydrogenase, butanediol DH, ketose reductase, cinnamyl reductase, and numerous others. The zinc-dependent alcohol dehydrogenases (ADHs) catalyze the NAD(P)(H)-dependent interconversion of alcohols to aldehydes or ketones. Active site zinc has a catalytic role, while structural zinc aids in stability. ADH-like proteins typically form dimers (typically higher plants, mammals) or tetramers (yeast, bacteria), and generally have 2 tightly bound zinc atoms per subunit. The active site zinc is coordinated by a histidine, two cysteines, and a water molecule. The second zinc seems to play a structural role, affects subunit interactions, and is typically coordinated by 4 cysteines. Other MDR members have only a catalytic zinc, and some contain no coordinated zinc. Length = 384

>gnl|CDD|132245 TIGR03201, dearomat_had, 6-hydroxycyclohex-1-ene-1-carbonyl-CoA dehydrogenase

 Score = 71.1 bits (174), Expect = 1e-13
 Identities = 65/211 (30%), Positives = 90/211 (42%), Gaps = 18/211 (8%)

Query: 34  ATGEKDVTFKVTHCGICHSDLHMIKNEW-GNTIYPIVPGHEIVGVVTEVGSKVSKFKVGD 92
             G  DV  KV  CG+CH+DL         N   P+  GHEI G V + G+  + + +G 
Sbjct: 20  ELGAGDVVVKVAGCGVCHTDLSYYYMGVRTNHALPLALGHEISGRVIQAGAGAASW-IGK 78

Query: 93  KVGVGCMVGSCRSCDSCAIDLENYCPKVIMTYANKYHDGTITYGGYSDIMVADEHFVVRI 152
            V V  ++  C  C+ C       C    M        G    GG++  +V     +  +
Sbjct: 79  AVIVPAVI-PCGECELCKTGRGTICRAQKMP-------GNDMQGGFASHIVVPAKGLCVV 130

Query: 153 PE------GTPLDATAPLLCAGITVYSPLRFYGLDKPGMHVGVVGLGGLGHVAVKFAKAM 206
            E      G PL+  + +  A  T Y      GL K G  V V+G GG+G   V+ AKAM
Sbjct: 131 DEARLAAAGLPLEHVSVVADAVTTPYQAAVQAGL-KKGDLVIVIGAGGVGGYMVQTAKAM 189

Query: 207 GVKVTVISTSPSKKSEAIERLGADSFLVSRD 237
           G  V  I   P  K E ++  GAD  L  +D
Sbjct: 190 GAAVVAIDIDPE-KLEMMKGFGADLTLNPKD 219

Members of this protein family are 6-hydroxycyclohex-1-ene-1-carbonyl-CoA dehydrogenase, an enzyme in the anaerobic metabolism of aromatic enzymes by way of benzoyl-CoA, as seen in Thauera aromatica, Geobacter metallireducens, and Azoarcus sp. The experimentally characterized form from T. aromatica uses only NAD+, not NADP+. Note that Rhodopseudomonas palustris uses a different pathway to perform a similar degradation of benzoyl-CoA to 3-hydroxpimelyl-CoA. Length = 349

>gnl|CDD|129775 TIGR00692, tdh, L-threonine 3-dehydrogenase

 Score = 70.7 bits (173), Expect = 1e-13
 Identities = 53/198 (26%), Positives = 83/198 (41%), Gaps = 14/198 (7%)

Query: 36  GEKDVTFKVTHCGICHSDLHMIK-NEWGNTIY--PIVPGHEIVGVVTEVGSKVSKFKVGD 92
           G  +V  KV    IC +D+H+   +EW  +    P V GHE+ G V  +G  V   KVGD
Sbjct: 22  GPGEVLIKVLATSICGTDVHIYNWDEWAQSRIKPPQVVGHEVAGEVVGIGPGVEGIKVGD 81

Query: 93  KVGVGCMVGSCRSCDSCAIDLENYCPKVIMTYANKYHDGTITYGGYSDIMVADEHFVVRI 152
            V V   +  C  C +C     + C    +        G  T G +++  V     + + 
Sbjct: 82  YVSVETHI-VCGKCYACRRGQYHVCQNTKIF-------GVDTDGCFAEYAVVPAQNIWKN 133

Query: 153 PEGTPLDATAPLLCAGITVYSPLRFYGLDKPGMHVGVVGLGGLGHVAVKFAKAMGVKVTV 212
           P+  P +        G  V++ L        G  V V G G +G +A+  AKA G    +
Sbjct: 134 PKSIPPEYATIQEPLGNAVHTVLAG---PISGKSVLVTGAGPIGLMAIAVAKASGAYPVI 190

Query: 213 ISTSPSKKSEAIERLGAD 230
           +S     + E  +++GA 
Sbjct: 191 VSDPNEYRLELAKKMGAT 208

This protein is a tetrameric, zinc-binding, NAD-dependent enzyme of threonine catabolism. Closely related proteins include sorbitol dehydrogenase, xylitol dehydrogenase, and benzyl alcohol dehydrogenase. Eukaryotic examples of this enzyme have been demonstrated experimentally but do not appear in database search results.E. coli His-90 modulates substrate specificity and is believed part of the active site [Energy metabolism, Amino acids and amines]. Length = 340

>gnl|CDD|176242 cd08282, PFDH_like, Pseudomonas putida aldehyde-dismutating formaldehyde dehydrogenase (PFDH)

 Score = 70.3 bits (173), Expect = 2e-13
 Identities = 34/81 (41%), Positives = 41/81 (50%), Gaps = 6/81 (7%)

Query: 39  DVTFKVTHCGICHSDLHMIKNEWGNTIY--PIVPGHEIVGVVTEVGSKVSKFKVGDKVGV 96
           D   ++T   IC SDLHM +   G T     +V GHE +G V EVGS V   KVGD+V V
Sbjct: 27  DAIVRITTTAICGSDLHMYR---GRTGAEPGLVLGHEAMGEVEEVGSAVESLKVGDRVVV 83

Query: 97  GCMVGSCRSCDSCAIDLENYC 117
              V  C  C +C   L   C
Sbjct: 84  PFNVA-CGRCRNCKRGLTGVC 103

Formaldehyde dehydrogenase (FDH) is a member of the zinc-dependent/medium chain alcohol dehydrogenase family. Unlike typical FDH, Pseudomonas putida aldehyde-dismutating FDH (PFDH) is glutathione-independent. PFDH converts 2 molecules of aldehydes to corresponding carboxylic acid and alcohol. MDH family uses NAD(H) as a cofactor in the interconversion of alcohols and aldehydes, or ketones. Like the zinc-dependent alcohol dehydrogenases (ADH) of the medium chain alcohol dehydrogenase/reductase family (MDR), these tetrameric FDHs have a catalytic zinc that resides between the catalytic and NAD(H)binding domains and a structural zinc in a lobe of the catalytic domain. Unlike ADH, where NAD(P)(H) acts as a cofactor, NADH in FDH is a tightly bound redox cofactor (similar to nicotinamide proteins). The medium chain alcohol dehydrogenase family (MDR) has a NAD(P)(H)-binding domain in a Rossmann fold of an beta-alpha form. The N-terminal region typically has an all-beta catalytic domain. These proteins typically form dimers (typically higher plants, mammals) or tetramers (yeast, bacteria), and have 2 tightly bound zinc atoms per subunit. Length = 375

>gnl|CDD|176247 cd08287, FDH_like_ADH3, formaldehyde dehydrogenase (FDH)-like

 Score = 70.0 bits (172), Expect = 2e-13
 Identities = 70/290 (24%), Positives = 108/290 (37%), Gaps = 50/290 (17%)

Query: 39  DVTFKVTHCGICHSDLHMIKNEWGNTIYPIVP----GHEIVGVVTEVGSKVSKFKVGDKV 94
           D   +V    +C SDL          + P       GHE VGVV EVGS+V+  K GD V
Sbjct: 27  DAVIRVVATCVCGSDLW-----PYRGVSPTRAPAPIGHEFVGVVEEVGSEVTSVKPGDFV 81

Query: 95  GVGCMVGSCRSCDSCAIDLENYCPKVIMTYANKYHDGTITYGGYSDIMVADEHFVVRIPE 154
            +     S  +C  C       C      +   + DG    G Y  + +AD   +V++P 
Sbjct: 82  -IAPFAISDGTCPFCRAGFTTSCVHG--GFWGAFVDG--GQGEYVRVPLAD-GTLVKVPG 135

Query: 155 GTPLDA--TAPLL--------------CAGITVYSPLRFYGLDKPGMHVGVVGLGGLGHV 198
               D      LL               AG+            +PG  V VVG G +G  
Sbjct: 136 SPSDDEDLLPSLLALSDVMGTGHHAAVSAGV------------RPGSTVVVVGDGAVGLC 183

Query: 199 AVKFAKAMGVK-VTVISTSPSKKSEAIERLGADSFLVSRDQDEMQAAMGTMDGI-----I 252
           AV  AK +G + +  +S    +++ A E  GA   +  R ++ +        G+     +
Sbjct: 184 AVLAAKRLGAERIIAMSRHEDRQALARE-FGATDIVAERGEEAVARVRELTGGVGADAVL 242

Query: 253 DTVSAVHPLMPLIGLLKSQGKLVLVGAPEKPLELPAFSLLMGRKIVGGSM 302
           + V     +   I + +  G++  VG P   +EL    L      + G  
Sbjct: 243 ECVGTQESMEQAIAIARPGGRVGYVGVPHGGVELDVRELFFRNVGLAGGP 292

This group contains proteins identified as alcohol dehydrogenases and glutathione-dependant formaldehyde dehydrogenases (FDH) of the zinc-dependent/medium chain alcohol dehydrogenase family. The MDR family uses NAD(H) as a cofactor in the interconversion of alcohols and aldehydes, or ketones. FDH converts formaldehyde and NAD to formate and NADH. The initial step in this process the spontaneous formation of a S-(hydroxymethyl)glutathione adduct from formaldehyde and glutathione, followed by FDH-mediated oxidation (and detoxification) of the adduct to S-formylglutathione. The medium chain alcohol dehydrogenase family (MDR) has a NAD(P)(H)-binding domain in a Rossmann fold of a beta-alpha form. The N-terminal region typically has an all-beta catalytic domain. These proteins typically form dimers (typically higher plants, mammals) or tetramers (yeast, bacteria), and have 2 tightly bound zinc atoms per subunit. Length = 345

>gnl|CDD|176189 cd05286, QOR2, Quinone oxidoreductase (QOR)

 Score = 69.0 bits (170), Expect = 3e-13
 Identities = 56/175 (32%), Positives = 76/175 (43%), Gaps = 39/175 (22%)

Query: 67  PIVPGHEIVGVVTEVGSKVSKFKVGDKVGVGCMVGSCRSCDSCAIDLENYCPKVIMTYAN 126
           P V G E  GVV  VG  V+ FKVGD+V                             YA 
Sbjct: 55  PFVLGVEGAGVVEAVGPGVTGFKVGDRVA----------------------------YAG 86

Query: 127 KYHDGTITYGGYSDIMVADEHFVVRIPEGTPLDATAPLLCAGITVYSPLRFYGLDKPGMH 186
                    G Y++  V     +V++P+G   +  A LL  G+T +  LR     KPG  
Sbjct: 87  -------PPGAYAEYRVVPASRLVKLPDGISDETAAALLLQGLTAHYLLRETYPVKPGDT 139

Query: 187 VGVVGL-GGLGHVAVKFAKAMGVKVTVIST-SPSKKSEAIERLGADSFLVSRDQD 239
           V V    GG+G +  ++AKA+G   TVI T S  +K+E     GAD  +  RD+D
Sbjct: 140 VLVHAAAGGVGLLLTQWAKALG--ATVIGTVSSEEKAELARAAGADHVINYRDED 192

Quinone oxidoreductase (QOR) and 2-haloacrylate reductase. QOR catalyzes the conversion of a quinone + NAD(P)H to a hydroquinone + NAD(P)+. Quinones are cyclic diones derived from aromatic compounds. Membrane bound QOR actin the respiratory chains of bacteria and mitochondria, while soluble QOR acts to protect from toxic quinones (e.g. DT-diaphorase) or as a soluble eye-lens protein in some vertebrates (e.g. zeta-crystalin). QOR reduces quinones through a semi-quinone intermediate via a NAD(P)H-dependent single electron transfer. QOR is a member of the medium chain dehydrogenase/reductase family, but lacks the zinc-binding sites of the prototypical alcohol dehydrogenases of this group. 2-haloacrylate reductase, a member of this subgroup, catalyzes the NADPH-dependent reduction of a carbon-carbon double bond in organohalogen compounds. Although similar to QOR, Burkholderia 2-haloacrylate reductase does not act on the quinones 1,4-benzoquinone and 1,4-naphthoquinone. NAD(P)(H)-dependent oxidoreductases are the major enzymes in the interconversion of alcohols and aldehydes, or ketones. Alcohol dehydrogenase in the liver converts ethanol and NAD+ to acetaldehyde and NADH, while in yeast and some other microorganisms ADH catalyzes the conversion acetaldehyde to ethanol in alcoholic fermentation. ADH is a member of the medium chain alcohol dehydrogenase family (MDR), which have a NAD(P)(H)-binding domain in a Rossmann fold of a beta-alpha form. The NAD(H)-binding region is comprised of 2 structurally similar halves, each of which contacts a mononucleotide. A GxGxxG motif after the first mononucleotide contact half allows the close contact of the coenzyme with the ADH backbone. The N-terminal catalytic domain has a distant homology to GroES. These proteins typically form dimers (typically higher plants, mammals) or tetramers (yeast, bacteria), and have 2 tightly bound zinc atoms per subunit, a catalytic zinc at the active site and a structural zinc in a lobe of the catalytic domain. NAD(H) binding occurs in the cleft between the catalytic and coenzyme-binding domains at the active site, and coenzyme binding induces a conformational closing of this cleft. Coenzyme binding typically precedes and contributes to substrate binding. In human ADH catalysis, the zinc ion helps coordinate the alcohol, followed by deprotonation of a histidine, the ribose of NAD, a serine, then the alcohol, which allows the transfer of a hydride to NAD+, creating NADH and a zinc-bound aldehyde or ketone. In yeast and some bacteria, the active site zinc binds an aldehyde, polarizing it, and leading to the reverse reaction. Length = 320

>gnl|CDD|180054 PRK05396, tdh, L-threonine 3-dehydrogenase; Validated

 Score = 69.1 bits (170), Expect = 4e-13
 Identities = 74/233 (31%), Positives = 108/233 (46%), Gaps = 40/233 (17%)

Query: 36  GEKDVTFKVTHCGICHSDLHMIK-NEWG-NTI-YPIVPGHEIVGVVTEVGSKVSKFKVGD 92
           G  DV  KV    IC +D+H+   +EW   TI  P+V GHE VG V EVGS+V+ FKVGD
Sbjct: 24  GPNDVLIKVKKTAICGTDVHIYNWDEWAQKTIPVPMVVGHEFVGEVVEVGSEVTGFKVGD 83

Query: 93  KV-GVGCMV-GSCRSCDSCAIDLENYCPKVIMTYANKYH-------DGTITYGGYSDIMV 143
           +V G G +V G CR+C                  A + H        G    G +++ +V
Sbjct: 84  RVSGEGHIVCGHCRNC-----------------RAGRRHLCRNTKGVGVNRPGAFAEYLV 126

Query: 144 ADEHFVVRIPEGTPLDATA---PLLCAGITVYSPLRFYGLDKPGMHVGVVGLGGLGHVAV 200
                V +IP+  P D  A   P    G  V++ L F   D  G  V + G G +G +A 
Sbjct: 127 IPAFNVWKIPDDIPDDLAAIFDPF---GNAVHTALSF---DLVGEDVLITGAGPIGIMAA 180

Query: 201 KFAKAMGVKVTVISTSPSKKSEAIERLGADSFLVSRDQD--EMQAAMGTMDGI 251
             AK +G +  VI+     + E   ++GA   +    +D  ++ A +G  +G 
Sbjct: 181 AVAKHVGARHVVITDVNEYRLELARKMGATRAVNVAKEDLRDVMAELGMTEGF 233

Length = 341

>gnl|CDD|214840 smart00829, PKS_ER, Enoylreductase

 Score = 68.2 bits (168), Expect = 5e-13
 Identities = 47/179 (26%), Positives = 68/179 (37%), Gaps = 54/179 (30%)

Query: 69  VPGHEIVGVVTEVGSKVSKFKVGDKVGVGCMVGSCRSCDSCAIDLENYCPKVIMTYANKY 128
           V G E  GVVT VG  V+   VGD+V                                  
Sbjct: 25  VLGGECAGVVTRVGPGVTGLAVGDRVMG-------------------------------- 52

Query: 129 HDGTITYGGYSDIMVADEHFVVRIPEGTPLDATAPLLCAGITVYSPLRFYGLD-----KP 183
               +  G ++  +V D   VV IP+G   +  A +    +T Y     Y L      +P
Sbjct: 53  ----LAPGAFATRVVTDARLVVPIPDGWSFEEAATVPVVFLTAY-----YALVDLARLRP 103

Query: 184 GMHVGV-VGLGGLGHVAVKFAKAMGVKV--TVISTSPSKKSEAIERLG--ADSFLVSRD 237
           G  V +    GG+G  A++ A+ +G +V  T    SP K+ + +  LG   D    SRD
Sbjct: 104 GESVLIHAAAGGVGQAAIQLARHLGAEVFATA--GSPEKR-DFLRALGIPDDHIFSSRD 159

Enoylreductase in Polyketide synthases. Length = 287

>gnl|CDD|176192 cd08230, glucose_DH, Glucose dehydrogenase

 Score = 67.2 bits (165), Expect = 2e-12
 Identities = 66/277 (23%), Positives = 107/277 (38%), Gaps = 37/277 (13%)

Query: 48  GICHSDLHMIKNEWGNTIYP-----IVPGHEIVGVVTEVGSKVSKFKVGDKVGVGCMVGS 102
           G+C +D  ++  E+G    P     +V GHE +GVV EVG   S    GD V V  +   
Sbjct: 36  GVCGTDREIVAGEYGT--APPGEDFLVLGHEALGVVEEVG-DGSGLSPGDLV-VPTVRRP 91

Query: 103 CRSCDSCAIDLENYCPKVIMTYANKYHD-GTITYGGY-SDIMVADEHFVVRIPEG----- 155
              C +C I   ++C         +Y + G     G+  +  V D  ++V++P       
Sbjct: 92  PGKCLNCRIGRPDFCET------GEYTERGIKGLHGFMREYFVDDPEYLVKVPPSLADVG 145

Query: 156 ---TPLDATAPLLCAGITVYSPLRFYGLDKPGMHVGVVGLGGLGHVAVKFAKAMGVKVTV 212
               PL      +     V   L  +   +      V+G G +G +A    +  G +V V
Sbjct: 146 VLLEPLSVVEKAIEQAEAVQKRLPTWNPRR----ALVLGAGPIGLLAALLLRLRGFEVYV 201

Query: 213 ISTS--PSKKSEAIERLGADSFLVSRDQDEMQAAMGTMDGIIDTVSAVHPLMPLIGLLKS 270
           ++    P  K++ +E LGA     S+        +G  D II+           +  L  
Sbjct: 202 LNRRDPPDPKADIVEELGATYVNSSKTPVAEVKLVGEFDLIIEATGVPPLAFEALPALAP 261

Query: 271 QGKLVLVGAPEK--PLELPAFSLL----MGRKIVGGS 301
            G ++L G P      E+    L     +G K + GS
Sbjct: 262 NGVVILFGVPGGGREFEVDGGELNRDLVLGNKALVGS 298

Glucose dehydrogenase (GlcDH), a member of the medium chain dehydrogenase/zinc-dependent alcohol dehydrogenase-like family, catalyzes the NADP(+)-dependent oxidation of glucose to gluconate, the first step in the Entner-Doudoroff pathway, an alternative to or substitute for glycolysis or the pentose phosphate pathway. The medium chain dehydrogenases/reductase (MDR)/zinc-dependent alcohol dehydrogenase-like family, which contains the zinc-dependent alcohol dehydrogenase (ADH-Zn) and related proteins, is a diverse group of proteins related to the first identified member, class I mammalian ADH. MDRs display a broad range of activities and are distinguished from the smaller short chain dehydrogenases (~ 250 amino acids vs. the ~ 350 amino acids of the MDR). The MDR proteins have 2 domains: a C-terminal NAD(P) binding-Rossman fold domain of a beta-alpha form and an N-terminal catalytic domain with distant homology to GroES. The MDR group contains a host of activities, including the founding alcohol dehydrogenase (ADH), quinone reductase, sorbitol dehydrogenase, formaldehyde dehydrogenase, butanediol DH, ketose reductase, cinnamyl reductase, and numerous others. The zinc-dependent alcohol dehydrogenases (ADHs) catalyze the NAD(P)(H)-dependent interconversion of alcohols to aldehydes or ketones. Active site zinc has a catalytic role, while structural zinc aids in stability. Length = 355

>gnl|CDD|132409 TIGR03366, HpnZ_proposed, putative phosphonate catabolism associated alcohol dehydrogenase

 Score = 64.8 bits (158), Expect = 6e-12
 Identities = 63/237 (26%), Positives = 83/237 (35%), Gaps = 28/237 (11%)

Query: 69  VPGHEIVGVVTEVGSKVSKFKVGDKVGVG-----CMVGSCRSCDSCAIDLENYCPKVIMT 123
           V GHEIVG V  +    +    G  + +G      +   C  C  C   L   C  +   
Sbjct: 1   VLGHEIVGEVVALRGGFTPADDGVPLRLGQRVVWSVTVPCGRCFRCRRGLPQKCDSLRKY 60

Query: 124 YANKYHDGTITYGGYSDIMVADEHFVVRIPEGTPL--------DAT-APLLCAGITVYSP 174
                  G    GGY+      EH    +P GT +        DA  AP  CA  TV + 
Sbjct: 61  GHEALDSGWPLSGGYA------EHCH--LPAGTAIVPVPDDLPDAVAAPAGCATATVMAA 112

Query: 175 LRFYGLDKPGMHVGVVGLGGLGHVAVKFAKAMGVKVTVISTSPSKKSEAIERLGADSFLV 234
           L   G D  G  V VVG G LG  A   A A G    V +     + E     GA +   
Sbjct: 113 LEAAG-DLKGRRVLVVGAGMLGLTAAAAAAAAGAARVVAADPSPDRRELALSFGATALAE 171

Query: 235 SRDQDEMQAAM---GTMDGIIDTVSAVHPLMPLIGLLKSQGKLVLVG--APEKPLEL 286
                E Q  +     +D  ++   A   +   +  L   G  VL G   P  P+ L
Sbjct: 172 PEVLAERQGGLQNGRGVDVALEFSGATAAVRACLESLDVGGTAVLAGSVFPGGPVAL 228

This clade of zinc-binding alcohol dehydrogenases (members of pfam00107) are repeatedly associated with genes proposed to be involved with the catabolism of phosphonate compounds. Length = 280

>gnl|CDD|182229 PRK10083, PRK10083, putative oxidoreductase; Provisional

 Score = 64.8 bits (158), Expect = 1e-11
 Identities = 69/260 (26%), Positives = 115/260 (44%), Gaps = 20/260 (7%)

Query: 34  ATGEKDVTFKVTHCGICHSDLHMIKNEWGNTIYPIVPGHEIVGVVTEVGSKVSKFKVGDK 93
           A GE  V  KV   GIC SD H+ +       YP V GHE  GV+  VG  V   ++G++
Sbjct: 23  AAGE--VRVKVKLAGICGSDSHIYRGHNPFAKYPRVIGHEFFGVIDAVGEGVDAARIGER 80

Query: 94  VGVGCMVGSCRSCDSCAIDLENYCPKVIMTYANKYHDGTITYGGYSDIMVADEHFVVRIP 153
           V V  ++ SC  C  C+I   N C  +++        G    GG+S+  V       RIP
Sbjct: 81  VAVDPVI-SCGHCYPCSIGKPNVCTSLVVL-------GVHRDGGFSEYAVVPAKNAHRIP 132

Query: 154 EGTPLDATAPLLCAGITVYSPLRFYGLDKPGMHVGVVGLGGLGHVAVKFAKAM-GVKVTV 212
           +    D  A ++    T+ + +             + G G +G   V+  K +  VK  +
Sbjct: 133 DAIA-DQYAVMV-EPFTIAANVTGRTGPTEQDVALIYGAGPVGLTIVQVLKGVYNVKAVI 190

Query: 213 ISTSPSKKSEAIERLGADSFLVSRDQDEMQAAMGTMDGIIDTV---SAVHP--LMPLIGL 267
           ++    ++    +  GAD ++++  Q+ +  A+    GI  T+   +A HP  L   + L
Sbjct: 191 VADRIDERLALAKESGAD-WVINNAQEPLGEAL-EEKGIKPTLIIDAACHPSILEEAVTL 248

Query: 268 LKSQGKLVLVGAPEKPLELP 287
                ++VL+G   +P E+ 
Sbjct: 249 ASPAARIVLMGFSSEPSEIV 268

Length = 339

>gnl|CDD|176212 cd08250, Mgc45594_like, Mgc45594 gene product and other MDR family members

 Score = 64.2 bits (157), Expect = 2e-11
 Identities = 58/200 (29%), Positives = 78/200 (39%), Gaps = 47/200 (23%)

Query: 36  GEKDVTFKVTHCGICHSDLHMIKNEWGNTIYPIVP---GHEIVGVVTEVGSKVSKFKVGD 92
           G  +V  K    GI  SD++     +   + P  P   G E VG V  VG  V+ FKVGD
Sbjct: 29  GPGEVLVKNRFVGINASDINFTAGRYDPGVKP--PFDCGFEGVGEVVAVGEGVTDFKVGD 86

Query: 93  KVGVGCMVGSCRSCDSCAIDLENYCPKVIMTYANKYHDGTITYGGYSDIMVADEHFVVRI 152
            V                                     T+++G +++  V      V +
Sbjct: 87  AVA------------------------------------TMSFGAFAEYQVVPARHAVPV 110

Query: 153 PEGTPLDATAPLLCAGITVYSPLRFYGLDKPGMHVGVV-GLGGLGHVAVKFAKAMGVKVT 211
           PE  P     PLL +G+T    L   G  K G  V V    GG G  AV+ AK  G    
Sbjct: 111 PELKP--EVLPLLVSGLTASIALEEVGEMKSGETVLVTAAAGGTGQFAVQLAKLAG--CH 166

Query: 212 VIST-SPSKKSEAIERLGAD 230
           VI T S  +K+E ++ LG D
Sbjct: 167 VIGTCSSDEKAEFLKSLGCD 186

Includes Human Mgc45594 gene product of undetermined function. The medium chain dehydrogenases/reductase (MDR)/zinc-dependent alcohol dehydrogenase-like family, which contains the zinc-dependent alcohol dehydrogenase (ADH-Zn) and related proteins, is a diverse group of proteins related to the first identified member, class I mammalian ADH. MDRs display a broad range of activities and are distinguished from the smaller short chain dehydrogenases (~ 250 amino acids vs. the ~ 350 amino acids of the MDR). The MDR proteins have 2 domains: a C-terminal NAD(P) binding-Rossmann fold domain of a beta-alpha form and an N-terminal catalytic domain with distant homology to GroES. Length = 329

>gnl|CDD|173547 PTZ00354, PTZ00354, alcohol dehydrogenase; Provisional

 Score = 63.5 bits (155), Expect = 3e-11
 Identities = 50/183 (27%), Positives = 79/183 (43%), Gaps = 45/183 (24%)

Query: 66  YPIVPGH------EIVGVVTEVGSKVSKFKVGDKVGVGCMVGSCRSCDSCAIDLENYCPK 119
           YP  PG       E+ G V +VGS V +FK GD+V +  + G                  
Sbjct: 52  YPPPPGSSEILGLEVAGYVEDVGSDVKRFKEGDRV-MALLPG------------------ 92

Query: 120 VIMTYANKYHDGTITYGGYSDIMVADEHFVVRIPEGTPLDATAPLLCAGITVYSPLRFYG 179
                           GGY++  VA +  V+ IP+G   +  A +  A +T +  L+ +G
Sbjct: 93  ----------------GGYAEYAVAHKGHVMHIPQGYTFEEAAAIPEAFLTAWQLLKKHG 136

Query: 180 LDKPGMHVGV-VGLGGLGHVAVKFAKAMGVKVTVISTSPSKKSEAIERLGADSFLVSRDQ 238
             K G  V +  G  G+G  A + A+  G   T+I+TS  +K +  ++L A   ++ R  
Sbjct: 137 DVKKGQSVLIHAGASGVGTAAAQLAEKYGA-ATIITTSSEEKVDFCKKLAA--IILIRYP 193

Query: 239 DEM 241
           DE 
Sbjct: 194 DEE 196

Length = 334

>gnl|CDD|176214 cd08252, AL_MDR, Arginate lyase and other MDR family members

 Score = 62.9 bits (154), Expect = 4e-11
 Identities = 63/238 (26%), Positives = 107/238 (44%), Gaps = 53/238 (22%)

Query: 67  PIVPGHEIVGVVTEVGSKVSKFKVGDKVGVGCMVGSCRSCDSCAIDLENYCPKVIMTYAN 126
           P + G +  GVV  VGS+V+ FKVGD+V                                
Sbjct: 60  PKILGWDASGVVEAVGSEVTLFKVGDEV-------------------------------- 87

Query: 127 KYHDGTITY-GGYSDIMVADEHFVVRIPEG-TPLDATA-PLLCAGITVYSPL--RFYGLD 181
            Y+ G IT  G  ++  + DE  V   P+  +  +A A PL    +T +  L  R  G+ 
Sbjct: 88  -YYAGDITRPGSNAEYQLVDERIVGHKPKSLSFAEAAALPL--TSLTAWEALFDRL-GIS 143

Query: 182 KPGMHVG-----VVGLGGLGHVAVKFAKAMGVKVTVISTSPSKKSEA-IERLGADSFLVS 235
           +   + G     + G GG+G +A++ AK +   +TVI+T+   +S A ++ LGAD  +++
Sbjct: 144 EDAENEGKTLLIIGGAGGVGSIAIQLAKQLT-GLTVIATASRPESIAWVKELGAD-HVIN 201

Query: 236 RDQD---EMQA-AMGTMDGIIDTVSAVHPLMPLIGLLKSQGKLVLVGAPEKPLELPAF 289
             QD   +++A  +  +D I            +  L+  QG + L+  P++PL+L   
Sbjct: 202 HHQDLAEQLEALGIEPVDYIFCLTDTDQHWDAMAELIAPQGHICLIVDPQEPLDLGPL 259

This group contains a structure identified as an arginate lyase. Other members are identified quinone reductases, alginate lyases, and other proteins related to the zinc-dependent dehydrogenases/reductases. QOR catalyzes the conversion of a quinone and NAD(P)H to a hydroquinone and NAD(P+. Quinones are cyclic diones derived from aromatic compounds. Membrane bound QOR acts in the respiratory chains of bacteria and mitochondria, while soluble QOR acts to protect from toxic quinones (e.g. DT-diaphorase) or as a soluble eye-lens protein in some vertebrates (e.g. zeta-crystalin). QOR reduces quinones through a semi-quinone intermediate via a NAD(P)H-dependent single electron transfer. QOR is a member of the medium chain dehydrogenase/reductase family, but lacks the zinc-binding sites of the prototypical alcohol dehydrogenases of this group. Alcohol dehydrogenase in the liver converts ethanol and NAD+ to acetaldehyde and NADH, while in yeast and some other microorganisms ADH catalyzes the conversion acetaldehyde to ethanol in alcoholic fermentation. ADH is a member of the medium chain alcohol dehydrogenase family (MDR), which has a NAD(P)(H)-binding domain in a Rossmann fold of a beta-alpha form. The NAD(H)-binding region is comprised of 2 structurally similar halves, each of which contacts a mononucleotide. The N-terminal catalytic domain has a distant homology to GroES. These proteins typically form dimers (typically higher plants, mammals) or tetramers (yeast, bacteria), and have 2 tightly bound zinc atoms per subunit, a catalytic zinc at the active site and a structural zinc in a lobe of the catalytic domain. NAD(H) binding occurs in the cleft between the catalytic and coenzyme-binding domains at the active site, and coenzyme binding induces a conformational closing of this cleft. Coenzyme binding typically precedes and contributes to substrate binding. In human ADH catalysis, the zinc ion helps coordinate the alcohol, followed by deprotonation of a histidine, the ribose of NAD, a serine, then the alcohol, which allows the transfer of a hydride to NAD+, creating NADH and a zinc-bound aldehyde or ketone. In yeast and some bacteria, the active site zinc binds an aldehyde, polarizing it, and leading to the reverse reaction. Length = 336

>gnl|CDD|182130 PRK09880, PRK09880, L-idonate 5-dehydrogenase; Provisional

 Score = 62.4 bits (152), Expect = 6e-11
 Identities = 70/270 (25%), Positives = 109/270 (40%), Gaps = 30/270 (11%)

Query: 37  EKDVTFKVTHCGICHSDLHMIKN-EWGNTI--YPIVPGHEIVGVVTEVGSKVSKFKVGDK 93
                 ++T  GIC SDLH  +  + GN +   P+V GHE++G +    S  S  K G  
Sbjct: 27  NNGTLVQITRGGICGSDLHYYQEGKVGNFVIKAPMVLGHEVIGKIVHSDS--SGLKEGQT 84

Query: 94  VGVGCMVGSCRSCDSCAIDLENYCPKVIMTYANKYHDGTITY-----GGYSDIMVADEHF 148
           V +      C  C  C    EN C    M +      G+  Y     GG++   V D   
Sbjct: 85  VAIN-PSKPCGHCKYCLSHNENQC--TTMRFF-----GSAMYFPHVDGGFTRYKVVDTAQ 136

Query: 149 VVRIPEGTPLDATA---PLLCAGITVYSPLRFYGLDKPGMHVGVVGLGGLGHVAVKFAKA 205
            +  PE       A   PL  A    +      G D  G  V V G+G +G + V   K 
Sbjct: 137 CIPYPEKADEKVMAFAEPLAVAIHAAHQA----G-DLQGKRVFVSGVGPIGCLIVAAVKT 191

Query: 206 MGVKVTVISTSPSKKSEAIER-LGADSFL--VSRDQDEMQAAMGTMDGIIDTVSAVHPLM 262
           +G    ++    S +S ++ R +GAD  +   + D D  +A  G  D   +       + 
Sbjct: 192 LGAA-EIVCADVSPRSLSLAREMGADKLVNPQNDDLDHYKAEKGYFDVSFEVSGHPSSIN 250

Query: 263 PLIGLLKSQGKLVLVGAPEKPLELPAFSLL 292
             + + +++G +V VG    P E P  +L+
Sbjct: 251 TCLEVTRAKGVMVQVGMGGAPPEFPMMTLI 280

Length = 343

>gnl|CDD|176249 cd08289, MDR_yhfp_like, Yhfp putative quinone oxidoreductases

 Score = 62.0 bits (151), Expect = 1e-10
 Identities = 57/210 (27%), Positives = 92/210 (43%), Gaps = 46/210 (21%)

Query: 37  EKDVTFKVTHCGICHSDLHMIKNEWGNTI---YPIVPGHEIVGVVTEVGSKVSKFKVGDK 93
           E DV  +V +  + + D   + +  G  I   YP +PG ++ G V E  S   +FK GD+
Sbjct: 27  EGDVLIRVAYSSVNYKD--GLASIPGGKIVKRYPFIPGIDLAGTVVE--SNDPRFKPGDE 82

Query: 94  VGVGCMVGSCRSCDSCAIDLENYCPKVIMTYANKYHDGTITYGGYSDIMVADEHFVVRIP 153
           V                          I+T    Y  G   +GGYS+       +VV +P
Sbjct: 83  V--------------------------IVT---SYDLGVSHHGGYSEYARVPAEWVVPLP 113

Query: 154 EG-TPLDA----TAPLLCAGITVYSPLRFYGLDKPGMHVGVVG-LGGLGHVAVKFAKAMG 207
           +G T  +A    TA    A ++++  L   GL      V V G  GG+G +AV     +G
Sbjct: 114 KGLTLKEAMILGTAG-FTAALSIHR-LEENGLTPEQGPVLVTGATGGVGSLAVSILAKLG 171

Query: 208 VKVTVISTSPSKKSEAIERLGADSFLVSRD 237
            +V V ST  +  ++ +++LGA   ++ R+
Sbjct: 172 YEV-VASTGKADAADYLKKLGAKE-VIPRE 199

yhfp putative quinone oxidoreductases (QOR). QOR catalyzes the conversion of a quinone + NAD(P)H to a hydroquinone + NAD(P)+. Quinones are cyclic diones derived from aromatic compounds. Membrane bound QOR actin the respiratory chains of bacteria and mitochondria, while soluble QOR acts to protect from toxic quinones (e.g. DT-diaphorase) or as a soluble eye-lens protein in some vertebrates (e.g. zeta-crystalin). QOR reduces quinones through a semi-quinone intermediate via a NAD(P)H-dependent single electron transfer. QOR is a member of the medium chain dehydrogenase/reductase family, but lacks the zinc-binding sites of the prototypical alcohol dehydrogenases of this group. NAD(P)(H)-dependent oxidoreductases are the major enzymes in the interconversion of alcohols and aldehydes, or ketones. Alcohol dehydrogenase in the liver converts ethanol and NAD+ to acetaldehyde and NADH, while in yeast and some other microorganisms ADH catalyzes the conversion acetaldehyde to ethanol in alcoholic fermentation. ADH is a member of the medium chain alcohol dehydrogenase family (MDR), which has a NAD(P)(H)-binding domain in a Rossmann fold of a beta-alpha form. The NAD(H)-binding region is comprised of 2 structurally similar halves, each of which contacts a mononucleotide. A GxGxxG motif after the first mononucleotide contact half allows the close contact of the coenzyme with the ADH backbone. The N-terminal catalytic domain has a distant homology to GroES. These proteins typically form dimers (typically higher plants, mammals) or tetramers (yeast, bacteria), and have 2 tightly bound zinc atoms per subunit, a catalytic zinc at the active site, and a structural zinc in a lobe of the catalytic domain. NAD(H) binding occurs in the cleft between the catalytic and coenzyme-binding domains at the active site, and coenzyme binding induces a conformational closing of this cleft. Coenzyme binding typically precedes and contributes to substrate binding. In human ADH catalysis, the zinc ion helps coordinate the alcohol, followed by deprotonation of a histidine, the ribose of NAD, a serine, then the alcohol, which allows the transfer of a hydride to NAD+, creating NADH and a zinc-bound aldehyde or ketone. In yeast and some bacteria, the active site zinc binds an aldehyde, polarizing it, and leading to the reverse reaction. Length = 326

>gnl|CDD|215442 PLN02827, PLN02827, Alcohol dehydrogenase-like

 Score = 61.8 bits (150), Expect = 1e-10
 Identities = 80/333 (24%), Positives = 129/333 (38%), Gaps = 42/333 (12%)

Query: 39  DVTFKVTHCGICHSDLHMIKNEWGNT-IYPIVPGHEIVGVVTEVGSKVSKFKVGDKVGVG 97
           ++  KV    +C SDL    + W +  ++P + GHE  G+V  +G  V++F+ GD V + 
Sbjct: 39  EIRIKVVSTSLCRSDL----SAWESQALFPRIFGHEASGIVESIGEGVTEFEKGDHV-LT 93

Query: 98  CMVGSCRSCDSCAIDLENYCPKVIMTYANKYHD---------GTITY-----GGYSDIMV 143
              G C SC  C     N C  + +      H          G   Y       +S+  V
Sbjct: 94  VFTGECGSCRHCISGKSNMCQVLGLERKGVMHSDQKTRFSIKGKPVYHYCAVSSFSEYTV 153

Query: 144 ADEHFVVRIPEGTPLDATAPLLC---AGITVYSPLRFYGLDKPGMHVGVVGLGGLGHVAV 200
                 V++    PL     L C   AG+   +      + K G  V + GLG +G    
Sbjct: 154 VHSGCAVKVDPLAPLHKICLLSCGVAAGLG--AAWNVADVSK-GSSVVIFGLGTVGLSVA 210

Query: 201 KFAKAMGV-KVTVISTSPSKKSEAIERLGADSFLVSRDQDE--MQAAMGTMDGIID-TVS 256
           + AK  G  ++  +  +P K  +A +  G   F+   D  E   Q       G  D +  
Sbjct: 211 QGAKLRGASQIIGVDINPEKAEKA-KTFGVTDFINPNDLSEPIQQVIKRMTGGGADYSFE 269

Query: 257 AVHPLMPLIGLLKS----QGKLVLVGAPEKPLELPA-FSLLMGRKIVGGSMIGGMKETQE 311
            V         L+S     G  V +G P+   E+ A + L +  + + GS+ GG K   +
Sbjct: 270 CVGDTGIATTALQSCSDGWGLTVTLGVPKAKPEVSAHYGLFLSGRTLKGSLFGGWKPKSD 329

Query: 312 ---MIDFAAKHNIRADIEV---IPADYVNTALE 338
              ++D      I  D  +   +  D +N A E
Sbjct: 330 LPSLVDKYMNKEIMIDEFITHNLSFDEINKAFE 362

Length = 378

>gnl|CDD|176213 cd08251, polyketide_synthase, polyketide synthase

 Score = 61.3 bits (149), Expect = 1e-10
 Identities = 43/165 (26%), Positives = 64/165 (38%), Gaps = 38/165 (23%)

Query: 66  YPIVPGHEIVGVVTEVGSKVSKFKVGDKVGVGCMVGSCRSCDSCAIDLENYCPKVIMTYA 125
           YP  PG E  GVV  VG  V++  VGD+V      G                        
Sbjct: 37  YPFTPGFEASGVVRAVGPHVTRLAVGDEVIA--GTGE----------------------- 71

Query: 126 NKYHDGTITYGGYSDIMVADEHFVVRIPEGTPLDATAPLLCAGITVYSPLRFYGLDKPGM 185
                   + GG++ ++   E  VVR P     +    L    +TV       GL   G 
Sbjct: 72  --------SMGGHATLVTVPEDQVVRKPASLSFEEACALPVVFLTVIDAFARAGL-AKGE 122

Query: 186 HVGV-VGLGGLGHVAVKFAKAMGVKVTVISTSPS-KKSEAIERLG 228
           H+ +    GG G +AV+ A+  G    + +T+ S  K E +++LG
Sbjct: 123 HILIQTATGGTGLMAVQLARLKG--AEIYATASSDDKLEYLKQLG 165

Polyketide synthases produce polyketides in step by step mechanism that is similar to fatty acid synthesis. Enoyl reductase reduces a double to single bond. Erythromycin is one example of a polyketide generated by 3 complex enzymes (megasynthases). 2-enoyl thioester reductase (ETR) catalyzes the NADPH-dependent dependent conversion of trans-2-enoyl acyl carrier protein/coenzyme A (ACP/CoA) to acyl-(ACP/CoA) in fatty acid synthesis. 2-enoyl thioester reductase activity has been linked in Candida tropicalis as essential in maintaining mitiochondrial respiratory function. This ETR family is a part of the medium chain dehydrogenase/reductase family, but lack the zinc coordination sites characteristic of the alcohol dehydrogenases in this family. NAD(P)(H)-dependent oxidoreductases are the major enzymes in the interconversion of alcohols and aldehydes, or ketones. Alcohol dehydrogenase in the liver converts ethanol and NAD+ to acetaldehyde and NADH, while in yeast and some other microorganisms ADH catalyzes the conversion acetaldehyde to ethanol in alcoholic fermentation. ADH is a member of the medium chain alcohol dehydrogenase family (MDR), which have a NAD(P)(H)-binding domain in a Rossmann fold of a beta-alpha form. The NAD(H)-binding region is comprised of 2 structurally similar halves, each of which contacts a mononucleotide. The N-terminal catalytic domain has a distant homology to GroES. These proteins typically form dimers (typically higher plants, mammals) or tetramers (yeast, bacteria), and have 2 tightly bound zinc atoms per subunit, a catalytic zinc at the active site, and a structural zinc in a lobe of the catalytic domain. NAD(H)-binding occurs in the cleft between the catalytic and coenzyme-binding domains at the active site, and coenzyme binding induces a conformational closing of this cleft. Coenzyme binding typically precedes and contributes to substrate binding. Length = 303

>gnl|CDD|176205 cd08243, quinone_oxidoreductase_like_1, Quinone oxidoreductase (QOR)

 Score = 59.9 bits (146), Expect = 4e-10
 Identities = 63/290 (21%), Positives = 105/290 (36%), Gaps = 45/290 (15%)

Query: 48  GICHSDLHMIKNEWGNTIYPIVPGHEIVGVVTEVGSKVSKFKVGDKVGVGCMVGSCRSCD 107
           G+  S++   +    +  +P V G E VG V E       F  G +V    M G  R+ D
Sbjct: 38  GLNRSEIFTRQGHSPSVKFPRVLGIEAVGEVEEAPG--GTFTPGQRV-ATAMGGMGRTFD 94

Query: 108 SCAIDLENYCPKVIMTYANKYHDGTITYGGYSDIMVADEHFVVRIPEGTPLDATAPLLCA 167
                                       G Y++  +     V  I         A L   
Sbjct: 95  ----------------------------GSYAEYTLVPNEQVYAIDSDLSWAELAALPET 126

Query: 168 GITVYSPLRFYGLD-KPGMHVGVVG-LGGLGHVAVKFAKAMGVKVTVISTSPSKKSEAIE 225
             T +  L F  L  +PG  + + G    +G  A+K AKA+G  VT  + SP +    ++
Sbjct: 127 YYTAWGSL-FRSLGLQPGDTLLIRGGTSSVGLAALKLAKALGATVTATTRSPERA-ALLK 184

Query: 226 RLGADSFLVSR--DQDEMQAAMGTMDGIIDTVSAVHPLMPLIGLLKSQGKLVLVGAPEKP 283
            LGAD  ++      ++++AA G  D +++ V     L   +  L+  G + + G     
Sbjct: 185 ELGADEVVIDDGAIAEQLRAAPGGFDKVLELVGTA-TLKDSLRHLRPGGIVCMTGLLGGQ 243

Query: 284 LELPAFSLLM------GRKIVGGSMIGGMKET-QEMIDFAAKHNIRADIE 326
             L  F+ +          + G S     +   QE+ DF A  ++     
Sbjct: 244 WTLEDFNPMDDIPSGVNLTLTGSSSGDVPQTPLQELFDFVAAGHLDIPPS 293

NAD(P)(H)-dependent oxidoreductases are the major enzymes in the interconversion of alcohols and aldehydes, or ketones. The medium chain alcohol dehydrogenase family (MDR) have a NAD(P)(H)-binding domain in a Rossmann fold of a beta-alpha form. The N-terminal region typically has an all-beta catalytic domain. These proteins typically form dimers (typically higher plants, mammals) or tetramers (yeast, bacteria), and have 2 tightly bound zinc atoms per subunit. Length = 320

>gnl|CDD|176235 cd08274, MDR9, Medium chain dehydrogenases/reductase (MDR)/zinc-dependent alcohol dehydrogenase-like family

 Score = 59.6 bits (145), Expect = 6e-10
 Identities = 67/226 (29%), Positives = 98/226 (43%), Gaps = 29/226 (12%)

Query: 61  WGNTI-YPIVPGHEIVGVVTEVGSKVSKFKVGDKVGVGCMVGSCRSCDSCAIDLENYCPK 119
           WG T+ +P + G +IVG V  VG  V   ++G++V V          D    D     P 
Sbjct: 71  WGGTLSFPRIQGADIVGRVVAVGEGVDTARIGERVLV----------DPSIRDPPEDDPA 120

Query: 120 VIMTYANKYHDGTITYGGYSDIMV--ADEHFVVRIPEGTPLDATAPLLCAGITVYSPLRF 177
            I    ++        GG+++  V  A+  + V  P      AT P  C+  T  + L  
Sbjct: 121 DIDYIGSERD------GGFAEYTVVPAENAYPVNSPLSDVELATFP--CSYSTAENMLER 172

Query: 178 YGLDKPGMHVGVVGL-GGLGHVAVKFAKAMGVKVTVISTSPSKKSEAIERLGADSFLVSR 236
            G+   G  V V G  GG+G   V+ AK  G  V  +    + K EA+  LGAD+  + R
Sbjct: 173 AGV-GAGETVLVTGASGGVGSALVQLAKRRGAIVIAV-AGAA-KEEAVRALGADTV-ILR 228

Query: 237 DQDEMQAAMGTMDGIIDTVSAV--HPLMP-LIGLLKSQGKLVLVGA 279
           D   +  A       +D V+ V   PL P L+ LL+  G+ V  GA
Sbjct: 229 DAPLLADAKALGGEPVDVVADVVGGPLFPDLLRLLRPGGRYVTAGA 274

This group is a member of the medium chain dehydrogenases/reductase (MDR)/zinc-dependent alcohol dehydrogenase-like family, but lacks the zinc-binding sites of the zinc-dependent alcohol dehydrogenases. The medium chain dehydrogenases/reductase (MDR)/zinc-dependent alcohol dehydrogenase-like family, which contains the zinc-dependent alcohol dehydrogenase (ADH-Zn) and related proteins, is a diverse group of proteins related to the first identified member, class I mammalian ADH. MDRs display a broad range of activities and are distinguished from the smaller short chain dehydrogenases (~ 250 amino acids vs. the ~ 350 amino acids of the MDR). The MDR proteins have 2 domains: a C-terminal NAD(P)-binding Rossmann fold domain of a beta-alpha form and an N-terminal catalytic domain with distant homology to GroES. The MDR group contains a host of activities, including the founding alcohol dehydrogenase (ADH), quinone reductase, sorbitol dehydrogenase, formaldehyde dehydrogenase, butanediol DH, ketose reductase, cinnamyl reductase, and numerous others. The zinc-dependent alcohol dehydrogenases (ADHs) catalyze the NAD(P)(H)-dependent interconversion of alcohols to aldehydes or ketones. Active site zinc has a catalytic role, while structural zinc aids in stability. ADH-like proteins typically form dimers (typically higher plants, mammals) or tetramers (yeast, bacteria), and generally have 2 tightly bound zinc atoms per subunit. The active site zinc is coordinated by a histidine, two cysteines, and a water molecule. The second zinc seems to play a structural role, affects subunit interactions, and is typically coordinated by 4 cysteines. Length = 350

>gnl|CDD|176218 cd08256, Zn_ADH2, Alcohol dehydrogenases of the MDR family

 Score = 58.2 bits (141), Expect = 2e-09
 Identities = 60/225 (26%), Positives = 91/225 (40%), Gaps = 56/225 (24%)

Query: 36  GEKDVTFKVTHCGICHSDL---HMIKNEWGNTIY------PIVPGHEIVGVVTEVGSKVS 86
           G  ++  KV  CGIC  D+   H   + WG+         P++PGHE VG V E+G    
Sbjct: 23  GPGEILVKVEACGICAGDIKCYHGAPSFWGDENQPPYVKPPMIPGHEFVGRVVELGEGAE 82

Query: 87  K--FKVGDKVG----VGCMVGSCRSCDSCAIDLENY--CPKVIMTYANKYHDGTITYGGY 138
           +   KVGD+V     V C   +CR C+        Y  C K      + Y       GG 
Sbjct: 83  ERGVKVGDRVISEQIVPC--WNCRFCNR-----GQYWMCQK-----HDLYGFQNNVNGGM 130

Query: 139 SDIMV-ADEHFVVRIPEGTPLDATA---PLLCAGITVYSPLRFYGLDKPGMHV------- 187
           ++ M    E  V ++P+  P +      PL CA          + +D+  +         
Sbjct: 131 AEYMRFPKEAIVHKVPDDIPPEDAILIEPLACA---------LHAVDRANIKFDDVVVLA 181

Query: 188 --GVVGLGGLGHVAVKFAKAMGVKVTVISTSPSKKSEAIERLGAD 230
             G +GLG +G   +K  K    K+ V+     + + A  + GAD
Sbjct: 182 GAGPLGLGMIGAARLKNPK----KLIVLDLKDERLALA-RKFGAD 221

This group has the characteristic catalytic and structural zinc-binding sites of the zinc-dependent alcohol dehydrogenases of the MDR family. The medium chain dehydrogenases/reductase (MDR)/zinc-dependent alcohol dehydrogenase-like family, which contains the zinc-dependent alcohol dehydrogenase (ADH-Zn) and related proteins, is a diverse group of proteins related to the first identified member, class I mammalian ADH. MDRs display a broad range of activities and are distinguished from the smaller short chain dehydrogenases (~ 250 amino acids vs. the ~ 350 amino acids of the MDR). The MDR proteins have 2 domains: a C-terminal NAD(P)-binding Rossmann fold domain of a beta-alpha form and an N-terminal catalytic domain with distant homology to GroES. The MDR group contains a host of activities, including the founding alcohol dehydrogenase (ADH), quinone reductase, sorbitol dehydrogenase, formaldehyde dehydrogenase, butanediol DH, ketose reductase, cinnamyl reductase, and numerous others. The zinc-dependent alcohol dehydrogenases (ADHs) catalyze the NAD(P)(H)-dependent interconversion of alcohols to aldehydes or ketones. Active site zinc has a catalytic role, while structural zinc aids in stability. Length = 350

>gnl|CDD|176210 cd08248, RTN4I1, Human Reticulon 4 Interacting Protein 1

 Score = 58.0 bits (141), Expect = 2e-09
 Identities = 56/217 (25%), Positives = 87/217 (40%), Gaps = 44/217 (20%)

Query: 67  PIVPGHEIVGVVTEVGSKVSKFKVGDKVGVGCMVGSCRSCDSCAIDLENYCPKVIMTYAN 126
           P+  G +  GVV ++GS V  F++GD+V                                
Sbjct: 74  PLTLGRDCSGVVVDIGSGVKSFEIGDEVWGAVPP-------------------------- 107

Query: 127 KYHDGTITYGGYSDIMVADEHFVVRIPEGTPLDATAPLLCAGITVYSPLRFYGLDKPGMH 186
            +  GT     +++ +V  E+ V + P+    +  A L  AG+T +S L   G   P   
Sbjct: 108 -WSQGT-----HAEYVVVPENEVSKKPKNLSHEEAASLPYAGLTAWSALVNVGGLNPKNA 161

Query: 187 VG--VV---GLGGLGHVAVKFAKAMGVKVTVISTSPSKKSEAIERLGADSFLVSRDQDEM 241
            G  V+   G GG+G  A++  KA G  VT   T  +     ++ LGAD  +   ++D  
Sbjct: 162 AGKRVLILGGSGGVGTFAIQLLKAWGAHVTT--TCSTDAIPLVKSLGADDVIDYNNEDFE 219

Query: 242 QA--AMGTMDGIIDTV-SAVHPLMPLIGLLKSQGKLV 275
           +     G  D I+DTV          + LLK  G  V
Sbjct: 220 EELTERGKFDVILDTVGGDTEKWA--LKLLKKGGTYV 254

Human Reticulon 4 Interacting Protein 1 is a member of the medium chain dehydrogenase/ reductase (MDR) family. Riticulons are endoplasmic reticulum associated proteins involved in membrane trafficking and neuroendocrine secretion. The MDR/zinc-dependent alcohol dehydrogenase-like family, which contains the zinc-dependent alcohol dehydrogenase (ADH-Zn) and related proteins, is a diverse group of proteins related to the first identified member, class I mammalian ADH. MDRs display a broad range of activities and are distinguished from the smaller short chain dehydrogenases (~ 250 amino acids vs. the ~ 350 amino acids of the MDR). The MDR proteins have 2 domains: a C-terminal NAD(P) binding-Rossmann fold domain of a beta-alpha form and an N-terminal catalytic domain with distant homology to GroES. Length = 350

>gnl|CDD|188164 TIGR01751, crot-CoA-red, crotonyl-CoA reductase

 Score = 56.0 bits (135), Expect = 1e-08
 Identities = 55/181 (30%), Positives = 86/181 (47%), Gaps = 25/181 (13%)

Query: 69  VPGHEIVGVVTEVGSKVSKFKVGDKVGVGCMVGSCRSCDSCAIDLENYCPKVIMTYANKY 128
           + G +  GVV  VG  V+++KVGD+V     V SC   D  A D  +  P   M  + + 
Sbjct: 80  IIGSDASGVVWRVGPGVTRWKVGDEV-----VASCLQVDLTAPDGRDGDP---MLSSEQR 131

Query: 129 HDGTIT-YGGYSDIMVADEHFVVRIPEG-TPLDATAPLLCAGITVY------SPLRFYGL 180
             G  T +G +++  +  ++ ++  P+  T  +A  P L    T Y      +P      
Sbjct: 132 IWGYETNFGSFAEFALVKDYQLMPKPKHLTWEEAACPGLTGA-TAYRQLVGWNPAAV--- 187

Query: 181 DKPGMHVGVVGL-GGLGHVAVKFAKAMG-VKVTVISTSPSKKSEAIERLGADSFLVSRDQ 238
            KPG +V + G  GGLG  A + A+A G   V V+S SP +K+E    LGA++ +   D 
Sbjct: 188 -KPGDNVLIWGAAGGLGSYATQLARAGGGNPVAVVS-SP-EKAEYCRSLGAEAVIDRNDF 244

Query: 239 D 239
            
Sbjct: 245 G 245

The enzyme modelled by This model is responsible for the conversion of crotonyl-CoA reductase to butyryl-CoA. In serine cycle methylotrophic bacteria this enzyme is involved in the process of acetyl-CoA to glyoxylate. In other bacteria the enzyme is used to produce butyrate for incorporation into polyketides such as tylosin from Streptomyces fradiae and coronatine from Pseudomonas syringae. Length = 398

>gnl|CDD|176183 cd05280, MDR_yhdh_yhfp, Yhdh and yhfp-like putative quinone oxidoreductases

 Score = 55.2 bits (134), Expect = 1e-08
 Identities = 50/200 (25%), Positives = 81/200 (40%), Gaps = 45/200 (22%)

Query: 66  YPIVPGHEIVGVVTEVGSKVSKFKVGDKVGV-GCMVGSCRSCDSCAIDLENYCPKVIMTY 124
           YP  PG +  G V  V S   +F+ GD+V V G  +G                    M  
Sbjct: 57  YPHTPGIDAAGTV--VSSDDPRFREGDEVLVTGYDLG--------------------MNT 94

Query: 125 ANKYHDGTITYGGYSDIMVADEHFVVRIPEG-TPLDATA---PLLCAGITVYSPLRFYGL 180
                      GG+++ +     +VV +PEG +  +A         A ++V+  L   G 
Sbjct: 95  D----------GGFAEYVRVPADWVVPLPEGLSLREAMILGTAGFTAALSVH-RLEDNGQ 143

Query: 181 DKPGMHVGVVGL-GGLGHVAVKFAKAMGVKVTVISTSPSKKSEAIERLGADSFLVSRD-- 237
                 V V G  GG+G +AV     +G  V  ++     +++ ++ LGA S ++ R+  
Sbjct: 144 TPEDGPVLVTGATGGVGSIAVAILAKLGYTVVALTGKEE-QADYLKSLGA-SEVLDREDL 201

Query: 238 QDEMQAAM--GTMDGIIDTV 255
            DE +  +      G IDTV
Sbjct: 202 LDESKKPLLKARWAGAIDTV 221

Yhdh and yhfp-like putative quinone oxidoreductases (QOR). QOR catalyzes the conversion of a quinone + NAD(P)H to a hydroquinone + NAD(P)+. Quinones are cyclic diones derived from aromatic compounds. Membrane bound QOR actin the respiratory chains of bacteria and mitochondria, while soluble QOR acts to protect from toxic quinones (e.g. DT-diaphorase) or as a soluble eye-lens protein in some vertebrates (e.g. zeta-crystalin). QOR reduces quinones through a semi-quinone intermediate via a NAD(P)H-dependent single electron transfer. QOR is a member of the medium chain dehydrogenase/reductase family, but lacks the zinc-binding sites of the prototypical alcohol dehydrogenases of this group. NAD(P)(H)-dependent oxidoreductases are the major enzymes in the interconversion of alcohols and aldehydes, or ketones. Alcohol dehydrogenase in the liver converts ethanol and NAD+ to acetaldehyde and NADH, while in yeast and some other microorganisms ADH catalyzes the conversion acetaldehyde to ethanol in alcoholic fermentation. ADH is a member of the medium chain alcohol dehydrogenase family (MDR), which has a NAD(P)(H)-binding domain in a Rossmann fold of a beta-alpha form. The NAD(H)-binding region is comprised of 2 structurally similar halves, each of which contacts a mononucleotide. A GxGxxG motif after the first mononucleotide contact half allows the close contact of the coenzyme with the ADH backbone. The N-terminal catalytic domain has a distant homology to GroES. These proteins typically form dimers (typically higher plants, mammals) or tetramers (yeast, bacteria), and have 2 tightly bound zinc atoms per subunit, a catalytic zinc at the active site and a structural zinc in a lobe of the catalytic domain. NAD(H) binding occurs in the cleft between the catalytic and coenzyme-binding domains at the active site, and coenzyme binding induces a conformational closing of this cleft. Coenzyme binding typically precedes and contributes to substrate binding. In human ADH catalysis, the zinc ion helps coordinate the alcohol, followed by deprotonation of a histidine, the ribose of NAD, a serine, then the alcohol, which allows the transfer of a hydride to NAD+, creating NADH and a zinc-bound aldehyde or ketone. In yeast and some bacteria, the active site zinc binds an aldehyde, polarizing it, and leading to the reverse reaction. Length = 325

>gnl|CDD|176250 cd08290, ETR, 2-enoyl thioester reductase (ETR)

 Score = 55.3 bits (134), Expect = 1e-08
 Identities = 49/218 (22%), Positives = 71/218 (32%), Gaps = 61/218 (27%)

Query: 34  ATGEKDVTFKVTHCGICHSDLHMIKNEWGNTIYPI----------VPGHEIVGVVTEVGS 83
                +V  K+    I  +D++ I       +YPI          V G+E VG V +VGS
Sbjct: 26  PGPPNEVLVKMLAAPINPADINQI-----QGVYPIKPPTTPEPPAVGGNEGVGEVVKVGS 80

Query: 84  KVSKFKVGDKVGVGCMVGSCRSCDSCAIDLENYCPKVIMTYANKYHDGT-ITYGGYSDIM 142
            V   K GD V                          I         GT  T+       
Sbjct: 81  GVKSLKPGDWV--------------------------IPLRPGL---GTWRTHA------ 105

Query: 143 VADEHFVVRIPEGTPLDATAPLLCAGITVYSPLRFYGLDKPGMHVGVV----GLGGLGHV 198
           V     ++++P     +  A L     T Y  L  +   +PG     V        +G  
Sbjct: 106 VVPADDLIKVPNDVDPEQAATLSVNPCTAYRLLEDFVKLQPG---DWVIQNGANSAVGQA 162

Query: 199 AVKFAKAMGVKVTVISTSPSKKSEAIERL---GADSFL 233
            ++ AK +G+K   +        E  ERL   GAD  L
Sbjct: 163 VIQLAKLLGIKTINVVRDRPDLEELKERLKALGADHVL 200

2-enoyl thioester reductase (ETR) catalyzes the NADPH-dependent conversion of trans-2-enoyl acyl carrier protein/coenzyme A (ACP/CoA) to acyl-(ACP/CoA) in fatty acid synthesis. 2-enoyl thioester reductase activity has been linked in Candida tropicalis as essential in maintaining mitiochondrial respiratory function. This ETR family is a part of the medium chain dehydrogenase/reductase family, but lack the zinc coordination sites characteristic of the alcohol dehydrogenases in this family. NAD(P)(H)-dependent oxidoreductases are the major enzymes in the interconversion of alcohols and aldehydes, or ketones. Alcohol dehydrogenase in the liver converts ethanol and NAD+ to acetaldehyde and NADH, while in yeast and some other microorganisms ADH catalyzes the conversion acetaldehyde to ethanol in alcoholic fermentation. ADH is a member of the medium chain alcohol dehydrogenase family (MDR), which has a NAD(P)(H)-binding domain in a Rossmann fold of a beta-alpha form. The NAD(H)-binding region is comprised of 2 structurally similar halves, each of which contacts a mononucleotide. The N-terminal catalytic domain has a distant homology to GroES. These proteins typically form dimers (typically higher plants, mammals) or tetramers (yeast, bacteria), and have 2 tightly bound zinc atoms per subunit, a catalytic zinc at the active site, and a structural zinc in a lobe of the catalytic domain. NAD(H) binding occurs in the cleft between the catalytic and coenzyme-binding domains, at the active site, and coenzyme binding induces a conformational closing of this cleft. Coenzyme binding typically precedes and contributes to substrate binding. Candida tropicalis enoyl thioester reductase (Etr1p) catalyzes the NADPH-dependent reduction of trans-2-enoyl thioesters in mitochondrial fatty acid synthesis. Etr1p forms homodimers, with each subunit containing a nucleotide-binding Rossmann fold domain and a catalytic domain. Length = 341

>gnl|CDD|130269 TIGR01202, bchC, 2-desacetyl-2-hydroxyethyl bacteriochlorophyllide A dehydrogenase

 Score = 53.7 bits (129), Expect = 4e-08
 Identities = 70/268 (26%), Positives = 98/268 (36%), Gaps = 72/268 (26%)

Query: 65  IYPIVPGHEIVGVVTEVGSKVSKFKVGDKVGVGCMVGSCRSCDSCAIDLENYCPKVIMTY 124
            YP+VPG+E VG V E G     F+ GD+V                     + P      
Sbjct: 57  GYPLVPGYESVGRVVEAGPDTG-FRPGDRV---------------------FVPG----- 89

Query: 125 ANKYHDGTITYGGYSDIMVADEHFVVRI-----PEGT--PLDATAPLLCAGITVYSPLRF 177
           +N Y D    +GG S  +V     V R+     P+G    L ATA    AG  V      
Sbjct: 90  SNCYEDVRGLFGGASKRLVTPASRVCRLDPALGPQGALLALAATARHAVAGAEVKVL--- 146

Query: 178 YGLDKPGMHVGVVGLGGLGHVAVKFAKAMGVK-VTVISTSPSKKSEAIERLGADSFLV-- 234
                      +VG G LG +  +  KA G     V  T+P +      R GA  + V  
Sbjct: 147 --------PDLIVGHGTLGRLLARLTKAAGGSPPAVWETNPRR------RDGATGYEVLD 192

Query: 235 -----SRDQDEMQAAMGTMDGIIDTVSAVHPLMPLIGLLKSQGKLVLVGAPEKPLEL--- 286
                 RD   +  A G    +IDT         L+  L   G++VL G   +P+     
Sbjct: 193 PEKDPRRDYRAIYDASGDP-SLIDT---------LVRRLAKGGEIVLAGFYTEPVNFDFV 242

Query: 287 PAFSLLMGRKIVGGSMIGGMKETQEMID 314
           PAF      +I      G +   +E+I+
Sbjct: 243 PAFMKEARLRIAAEWQPGDLHAVRELIE 270

[Biosynthesis of cofactors, prosthetic groups, and carriers, Chlorophyll and bacteriochlorphyll]. Length = 308

>gnl|CDD|234025 TIGR02819, fdhA_non_GSH, formaldehyde dehydrogenase, glutathione-independent

 Score = 53.3 bits (128), Expect = 7e-08
 Identities = 32/83 (38%), Positives = 38/83 (45%), Gaps = 7/83 (8%)

Query: 28  FHFSRRATGEKDVTFKVTHCGICHSDLHMIKNEWGNTIYP--IVPGHEIVGVVTEVGSKV 85
                    E  V  KV    IC SD HM++   G T  P  +V GHEI G V E G  V
Sbjct: 24  LELPDGRKCEHGVILKVVTTNICGSDQHMVR---GRTTAPTGLVLGHEITGEVIEKGRDV 80

Query: 86  SKFKVGDKVGVGCMV--GSCRSC 106
              K+GD V V   +  G CR+C
Sbjct: 81  EFIKIGDIVSVPFNIACGRCRNC 103

Members of this family represent a distinct clade within the larger family of zinc-dependent dehydrogenases of medium chain alcohols, a family that also includes the so-called glutathione-dependent formaldehyde dehydrogenase. Members of this protein family have a tightly bound NAD that can act as a true cofactor, rather than a cosubstrate in dehydrogenase reactions, in dismutase reactions for some aldehydes. The name given to this family, however, is formaldehyde dehydrogenase, glutathione-independent [Central intermediary metabolism, One-carbon metabolism]. Length = 393

>gnl|CDD|176206 cd08244, MDR_enoyl_red, Possible enoyl reductase

 Score = 51.2 bits (123), Expect = 3e-07
 Identities = 47/165 (28%), Positives = 64/165 (38%), Gaps = 36/165 (21%)

Query: 67  PIVPGHEIVGVVTEVGSKVSKFKVGDKVGVGCMVGSCRSCDSCAIDLENYCPKVIMTYAN 126
           P VPG E+ GVV  VG  V    +G +V                                
Sbjct: 60  PYVPGGEVAGVVDAVGPGVDPAWLGRRVVAHTGRAG------------------------ 95

Query: 127 KYHDGTITYGGYSDIMVADEHFVVRIPEGTPLDATAPLLCAGITVYSPLRFYGLDKPGMH 186
                    GGY+++ VAD   +  +P+G  L+A   ++  G T    L    L  PG  
Sbjct: 96  ---------GGYAELAVADVDSLHPVPDGLDLEAAVAVVHDGRTALGLLDLATL-TPGDV 145

Query: 187 VGVVGL-GGLGHVAVKFAKAMGVKVTVISTSPSKKSEAIERLGAD 230
           V V    GGLG + V+ AKA G  V   +  P  K+  +  LGAD
Sbjct: 146 VLVTAAAGGLGSLLVQLAKAAGATVVGAAGGP-AKTALVRALGAD 189

Member identified as possible enoyl reductase of the MDR family. 2-enoyl thioester reductase (ETR) catalyzes the NADPH-dependent dependent conversion of trans-2-enoyl acyl carrier protein/coenzyme A (ACP/CoA) to acyl-(ACP/CoA) in fatty acid synthesis. 2-enoyl thioester reductase activity has been linked in Candida tropicalis as essential in maintaining mitiochondrial respiratory function. This ETR family is a part of the medium chain dehydrogenase/reductase family, but lack the zinc coordination sites characteristic of the alcohol dehydrogenases in this family. NAD(P)(H)-dependent oxidoreductases are the major enzymes in the interconversion of alcohols and aldehydes, or ketones. Alcohol dehydrogenase in the liver converts ethanol and NAD+ to acetaldehyde and NADH, while in yeast and some other microorganisms ADH catalyzes the conversion acetaldehyde to ethanol in alcoholic fermentation. ADH is a member of the medium chain alcohol dehydrogenase family (MDR), which has a NAD(P)(H)-binding domain in a Rossmann fold of a beta-alpha form. The NAD(H)-binding region is comprised of 2 structurally similar halves, each of which contacts a mononucleotide. The N-terminal catalytic domain has a distant homology to GroES. These proteins typically form dimers (typically higher plants, mammals) or tetramers (yeast, bacteria), and have 2 tightly bound zinc atoms per subunit, a catalytic zinc at the active site, and a structural zinc in a lobe of the catalytic domain. NAD(H) binding occurs in the cleft between the catalytic and coenzyme-binding domains at the active site, and coenzyme binding induces a conformational closing of this cleft. Coenzyme binding typically precedes and contributes to substrate binding. Candida tropicalis enoyl thioester reductase (Etr1p) catalyzes the NADPH-dependent reduction of trans-2-enoyl thioesters in mitochondrial fatty acid synthesis. Etr1p forms homodimers, with each subunit containing a nucleotide-binding Rossmann fold domain and a catalytic domain. Length = 324

>gnl|CDD|225041 COG2130, COG2130, Putative NADP-dependent oxidoreductases [General function prediction only]

 Score = 51.1 bits (123), Expect = 3e-07
 Identities = 43/183 (23%), Positives = 74/183 (40%), Gaps = 16/183 (8%)

Query: 130 DGTITYGGYSDIMVADEHFVVRIPEGTPLDATAPLLCAG---ITVYSPLRFYGLDKPGMH 186
           D  +   G+ +  ++D   + ++   +P   +A L   G   +T Y  L   G  K G  
Sbjct: 95  DIVVGVSGWQEYAISDGEGLRKLDP-SPAPLSAYLGVLGMPGLTAYFGLLDIGQPKAGET 153

Query: 187 VGVVGL-GGLGHVAVKFAKAMGVKVTVISTSPSKKSEAIERLGADSFLVSRDQD--EM-- 241
           V V    G +G V  + AK  G +V  I+    K     E LG D+ +  + +D  +   
Sbjct: 154 VVVSAAAGAVGSVVGQIAKLKGCRVVGIAGGAEKCDFLTEELGFDAGIDYKAEDFAQALK 213

Query: 242 QAAMGTMDGIIDTVSAVHPLMPLIGLLKSQGKLVLVGA------PEKPLELPAFSLLMGR 295
           +A    +D   + V     L  ++ LL    ++ + GA      PE P       LLM +
Sbjct: 214 EACPKGIDVYFENVGGEV-LDAVLPLLNLFARIPVCGAISQYNAPELPPGPRRLPLLMAK 272

Query: 296 KIV 298
           ++ 
Sbjct: 273 RLR 275

Length = 340

>gnl|CDD|234024 TIGR02817, adh_fam_1, zinc-binding alcohol dehydrogenase family protein

 Score = 50.1 bits (120), Expect = 6e-07
 Identities = 56/245 (22%), Positives = 96/245 (39%), Gaps = 59/245 (24%)

Query: 67  PIVPGHEIVGVVTEVGSKVSKFKVGDKVGVGCMVGSCRSCDSCAIDLENYCPKVIMTYAN 126
           P + G +  GVV  VG +V+ FK GD+V                                
Sbjct: 59  PKILGWDAAGVVVAVGDEVTLFKPGDEV-------------------------------- 86

Query: 127 KYHDGTITY-GGYSDIMVADEHFVVRIPEGTPLDATAPLLCAGITVYSPL--RFYGLDKP 183
            ++ G I   G  ++  + DE  V   P+       A L    IT +  L  R  G++ P
Sbjct: 87  -WYAGDIDRPGSNAEFHLVDERIVGHKPKSLSFAEAAALPLTSITAWELLFDRL-GINDP 144

Query: 184 GMHVG-----VVGLGGLGHVAVKFAKAMGVKVTVIST-SPSKKSEAIERLGADSFLVSRD 237
                     + G GG+G + ++ A+ +   +TVI+T S  +  E +  LGA   ++   
Sbjct: 145 VAGDKRALLIIGGAGGVGSILIQLARQL-TGLTVIATASRPESQEWVLELGAH-HVIDHS 202

Query: 238 QDEMQAAMGTMDGIIDTVSAVHPLM-------PLIGLLKSQGKLVLVGAPE----KPLEL 286
           +  ++A +  +   ++ VS V  L         ++ LL  QG+  L+  P      P + 
Sbjct: 203 KP-LKAQLEKLG--LEAVSYVFSLTHTDQHFKEIVELLAPQGRFALIDDPAELDISPFKR 259

Query: 287 PAFSL 291
            + SL
Sbjct: 260 KSISL 264

Members of this model form a distinct subset of the larger family of oxidoreductases that includes zinc-binding alcohol dehydrogenases and NADPH:quinone reductases (pfam00107). While some current members of this family carry designations as putative alginate lyase, it seems no sequence with a direct characterization as such is detected by this model [Energy metabolism, Fermentation]. Length = 336

>gnl|CDD|176208 cd08246, crotonyl_coA_red, crotonyl-CoA reductase

 Score = 50.1 bits (120), Expect = 8e-07
 Identities = 51/174 (29%), Positives = 78/174 (44%), Gaps = 15/174 (8%)

Query: 71  GHEIVGVVTEVGSKVSKFKVGDKVGVGCMVGSCRSCDSCAIDLENYCP-KVIMTYANKYH 129
           G +  G+V  VG  V  +KVGD+V V C V      +    D   + P + I  Y     
Sbjct: 86  GSDASGIVWAVGEGVKNWKVGDEVVVHCSVWDGNDPERAGGD-PMFDPSQRIWGYET--- 141

Query: 130 DGTITYGGYSDIMVADEHFVVRIPEGTPLDATAPLLCAGITVYSPLRFYGLD--KPGMHV 187
                YG ++   +     ++  P+    +  A  +  G T Y  L  +  +  KPG +V
Sbjct: 142 ----NYGSFAQFALVQATQLMPKPKHLSWEEAAAYMLVGATAYRMLFGWNPNTVKPGDNV 197

Query: 188 GVVG-LGGLGHVAVKFAKAMG-VKVTVISTSPSKKSEAIERLGADSFLVSRDQD 239
            + G  GGLG +A++ A+A G   V V+S S   K+E    LGA+  +  RD D
Sbjct: 198 LIWGASGGLGSMAIQLARAAGANPVAVVS-SEE-KAEYCRALGAEGVINRRDFD 249

Crotonyl-CoA reductase, a member of the medium chain dehydrogenase/reductase family, catalyzes the NADPH-dependent conversion of crotonyl-CoA to butyryl-CoA, a step in (2S)-methylmalonyl-CoA production for straight-chain fatty acid biosynthesis. Like enoyl reductase, another enzyme in fatty acid synthesis, crotonyl-CoA reductase is a member of the zinc-dependent alcohol dehydrogenase-like medium chain dehydrogenase/reductase family. The medium chain dehydrogenases/reductase (MDR)/zinc-dependent alcohol dehydrogenase-like family, which contains the zinc-dependent alcohol dehydrogenase (ADH-Zn) and related proteins, is a diverse group of proteins related to the first identified member, class I mammalian ADH. MDRs display a broad range of activities and are distinguished from the smaller short chain dehydrogenases (~ 250 amino acids vs. the ~ 350 amino acids of the MDR). The MDR proteins have 2 domains: a C-terminal NAD(P) binding-Rossmann fold domain of a beta-alpha form and an N-terminal catalytic domain with distant homology to GroES. Length = 393

>gnl|CDD|182701 PRK10754, PRK10754, quinone oxidoreductase, NADPH-dependent; Provisional

 Score = 49.3 bits (118), Expect = 1e-06
 Identities = 54/212 (25%), Positives = 80/212 (37%), Gaps = 44/212 (20%)

Query: 23  GVLSPFHFSRRATGEKDVTFKVTHCGICHSDLHMIKNEWGNTIYPIVPGHEIVGVVTEVG 82
            VL    F+     E +V  +    GI + D ++    +     P   G E  GVV++VG
Sbjct: 14  EVLQAVEFTPADPAENEVQVENKAIGINYIDTYIRSGLYPPPSLPSGLGTEAAGVVSKVG 73

Query: 83  SKVSKFKVGDKVGVGCMVGSCRSCDSCAIDLENYCPKVIMTYANKYHDGTITYGGYSDIM 142
           S V   KVGD+V                             YA          G YS + 
Sbjct: 74  SGVKHIKVGDRV----------------------------VYAQS------ALGAYSSVH 99

Query: 143 VADEHFVVRIPEGTPLDATAPLLCAGITVYSPLRFYGLDKPG----MHVGVVGLGGLGHV 198
                    +P+    +  A     G+TVY  LR     KP      H      GG+G +
Sbjct: 100 NVPADKAAILPDAISFEQAAASFLKGLTVYYLLRKTYEIKPDEQFLFHAAA---GGVGLI 156

Query: 199 AVKFAKAMGVKVTVISTSPS-KKSEAIERLGA 229
           A ++AKA+G K  +I T  S +K++  ++ GA
Sbjct: 157 ACQWAKALGAK--LIGTVGSAQKAQRAKKAGA 186

Length = 327

>gnl|CDD|234026 TIGR02823, oxido_YhdH, putative quinone oxidoreductase, YhdH/YhfP family

 Score = 47.2 bits (113), Expect = 6e-06
 Identities = 61/230 (26%), Positives = 95/230 (41%), Gaps = 47/230 (20%)

Query: 37  EKDVTFKVTHCGICHSDLHMIKNEWGNT-IYPIVPGHEIVGVVTEVGSKVSKFKVGDKVG 95
           E DV  KV +  + + D   I  + G    YP++PG +  G V  V S+  +F+ GD+V 
Sbjct: 26  EGDVLIKVAYSSLNYKDALAITGKGGVVRSYPMIPGIDAAGTV--VSSEDPRFREGDEV- 82

Query: 96  VGCMVGSCRSCDSCAIDLENYCPKVIMTYANKYHDGTITYGGYSDIMVADEHFVVRIPEG 155
                                           Y  G    GGYS        ++V +PEG
Sbjct: 83  ----------------------------IVTGYGLGVSHDGGYSQYARVPADWLVPLPEG 114

Query: 156 -TPLDATAPLLCAGITVYSPLRFYGLDKPGMH-----VGVVGL-GGLGHVAVKFAKAMGV 208
            +  +A A L  AG T  + L    L++ G+      V V G  GG+G +AV     +G 
Sbjct: 115 LSLREAMA-LGTAGFT--AALSVMALERNGLTPEDGPVLVTGATGGVGSLAVAILSKLGY 171

Query: 209 KVTVISTSPSKKSEAIERLGADSFLVSRDQDEMQA---AMGTMDGIIDTV 255
           +V V ST  +++ + ++ LGA S ++ R+               G +DTV
Sbjct: 172 EV-VASTGKAEEEDYLKELGA-SEVIDREDLSPPGKPLEKERWAGAVDTV 219

This model represents a subfamily of pfam00107 as defined by Pfam, a superfamily in which some members are zinc-binding medium-chain alcohol dehydrogenases while others are quinone oxidoreductases with no bound zinc. This subfamily includes proteins studied crystallographically for insight into function: YhdH from Escherichia coli and YhfP from Bacillus subtilis. Members bind NADPH or NAD, but not zinc [Unknown function, Enzymes of unknown specificity]. Length = 323

>gnl|CDD|176248 cd08288, MDR_yhdh, Yhdh putative quinone oxidoreductases

 Score = 46.8 bits (112), Expect = 9e-06
 Identities = 50/201 (24%), Positives = 80/201 (39%), Gaps = 48/201 (23%)

Query: 66  YPIVPGHEIVGVVTEVGSKVSKFKVGDKVGVGCMVGSCRSCDSCAIDLENYCPKVIMTYA 125
           +P+VPG ++ G V E  S   +FK GD+V                               
Sbjct: 57  FPLVPGIDLAGTVVE--SSSPRFKPGDRV-----------------------------VL 85

Query: 126 NKYHDGTITYGGYSDIMVADEHFVVRIPEG-TPLDATAPLLCAGIT----VYSPLRFYGL 180
             +  G   +GGY+        ++V +PEG +   A A +  AG T    V + L  +G+
Sbjct: 86  TGWGVGERHWGGYAQRARVKADWLVPLPEGLSARQAMA-IGTAGFTAMLCVMA-LEDHGV 143

Query: 181 DKPGMHVGVVGL-GGLGHVAVKFAKAMGVKVTVISTSPSKKSEAIERLGADSFLVSRDQD 239
                 V V G  GG+G VAV     +G +V   +  P  +++ +  LGA   +   D+ 
Sbjct: 144 TPGDGPVLVTGAAGGVGSVAVALLARLGYEVVASTGRPE-EADYLRSLGASEII---DRA 199

Query: 240 EMQAAMGTMD-----GIIDTV 255
           E+      +      G +DTV
Sbjct: 200 ELSEPGRPLQKERWAGAVDTV 220

Yhdh putative quinone oxidoreductases (QOR). QOR catalyzes the conversion of a quinone + NAD(P)H to a hydroquinone + NAD(P)+. Quinones are cyclic diones derived from aromatic compounds. Membrane bound QOR actin the respiratory chains of bacteria and mitochondria, while soluble QOR acts to protect from toxic quinones (e.g. DT-diaphorase) or as a soluble eye-lens protein in some vertebrates (e.g. zeta-crystalin). QOR reduces quinones through a semi-quinone intermediate via a NAD(P)H-dependent single electron transfer. QOR is a member of the medium chain dehydrogenase/reductase family, but lacks the zinc-binding sites of the prototypical alcohol dehydrogenases of this group. NAD(P)(H)-dependent oxidoreductases are the major enzymes in the interconversion of alcohols and aldehydes, or ketones. Alcohol dehydrogenase in the liver converts ethanol and NAD+ to acetaldehyde and NADH, while in yeast and some other microorganisms ADH catalyzes the conversion acetaldehyde to ethanol in alcoholic fermentation. ADH is a member of the medium chain alcohol dehydrogenase family (MDR), which has a NAD(P)(H)-binding domain in a Rossmann fold of a beta-alpha form. The NAD(H)-binding region is comprised of 2 structurally similar halves, each of which contacts a mononucleotide. A GxGxxG motif after the first mononucleotide contact half allows the close contact of the coenzyme with the ADH backbone. The N-terminal catalytic domain has a distant homology to GroES. These proteins typically form dimers (typically higher plants, mammals) or tetramers (yeast, bacteria), and have 2 tightly bound zinc atoms per subunit, a catalytic zinc at the active site and a structural zinc in a lobe of the catalytic domain. NAD(H) binding occurs in the cleft between the catalytic and coenzyme-binding domains at the active site, and coenzyme binding induces a conformational closing of this cleft. Coenzyme binding typically precedes and contributes to substrate binding. In human ADH catalysis, the zinc ion helps coordinate the alcohol, followed by deprotonation of a histidine, the ribose of NAD, a serine, then the alcohol, which allows the transfer of a hydride to NAD+, creating NADH and a zinc-bound aldehyde or ketone. In yeast and some bacteria, the active site zinc binds an aldehyde, polarizing it, and leading to the reverse reaction. Length = 324

>gnl|CDD|176231 cd08270, MDR4, Medium chain dehydrogenases/reductase (MDR)/zinc-dependent alcohol dehydrogenase-like family

 Score = 45.1 bits (107), Expect = 3e-05
 Identities = 50/217 (23%), Positives = 82/217 (37%), Gaps = 53/217 (24%)

Query: 69  VPGHEIVGVVTEVGSKVSKFKVGDKVGVGCMVGSCRSCDSCAIDLENYCPKVIMTYANKY 128
           VPG +  GVV    +  S   VG +V VG                               
Sbjct: 54  VPGWDAAGVVERAAADGSGPAVGARV-VGLGAM--------------------------- 85

Query: 129 HDGTITYGGYSDIMVADEHFVVRIPEGTPLDATAPLLCAGITVYSPLRFYGLDKPGMHVG 188
                  G +++++     ++  +P+G      A L  AG+T         L + G  +G
Sbjct: 86  -------GAWAELVAVPTGWLAVLPDGVSFAQAATLPVAGVTAL-----RALRRGGPLLG 133

Query: 189 ----VVGL-GGLGHVAVKFAKAMGVKVTVISTSPSKKSEAIERLGADSFLVSRDQDEMQA 243
               V G  GG+G  AV+ A   G  V  +  SP  ++E +  LGA   +V       + 
Sbjct: 134 RRVLVTGASGGVGRFAVQLAALAGAHVVAVVGSP-ARAEGLRELGAAEVVVGGS----EL 188

Query: 244 AMGTMDGIIDTVSAVHPLM-PLIGLLKSQGKLVLVGA 279
           +   +D ++D+V    P +   + LL   G +V VG+
Sbjct: 189 SGAPVDLVVDSVGG--PQLARALELLAPGGTVVSVGS 223

This group is a member of the medium chain dehydrogenases/reductase (MDR)/zinc-dependent alcohol dehydrogenase-like family, but lacks the zinc-binding sites of the zinc-dependent alcohol dehydrogenases. The medium chain dehydrogenases/reductase (MDR)/zinc-dependent alcohol dehydrogenase-like family, which contains the zinc-dependent alcohol dehydrogenase (ADH-Zn) and related proteins, is a diverse group of proteins related to the first identified member, class I mammalian ADH. MDRs display a broad range of activities and are distinguished from the smaller short chain dehydrogenases (~ 250 amino acids vs. the ~ 350 amino acids of the MDR). The MDR proteins have 2 domains: a C-terminal NAD(P)-binding Rossmann fold domain of a beta-alpha form and an N-terminal catalytic domain with distant homology to GroES. The MDR group contains a host of activities, including the founding alcohol dehydrogenase (ADH), quinone reductase, sorbitol dehydrogenase, formaldehyde dehydrogenase, butanediol DH, ketose reductase, cinnamyl reductase, and numerous others. The zinc-dependent alcohol dehydrogenases (ADHs) catalyze the NAD(P)(H)-dependent interconversion of alcohols to aldehydes or ketones. Active site zinc has a catalytic role, while structural zinc aids in stability. ADH-like proteins typically form dimers (typically higher plants, mammals) or tetramers (yeast, bacteria), and generally have 2 tightly bound zinc atoms per subunit. The active site zinc is coordinated by a histidine, two cysteines, and a water molecule. The second zinc seems to play a structural role, affects subunit interactions, and is typically coordinated by 4 cysteines. Length = 305

>gnl|CDD|240625 cd05300, 2-Hacid_dh_1, Putative D-isomer specific 2-hydroxyacid dehydrogenase

 Score = 44.8 bits (107), Expect = 3e-05
 Identities = 17/70 (24%), Positives = 31/70 (44%), Gaps = 10/70 (14%)

Query: 184 GMHVGVVGLGGLG-HVAVKFAKAMGVKVTVISTSPSKKSEAIERLGADSFLVSRDQDEMQ 242
           G  V +VGLG +G  +A + AKA G++V  +  S       ++ +           DE+ 
Sbjct: 134 GKTVLIVGLGDIGREIA-RRAKAFGMRVIGVRRSGRPAPPVVDEV--------YTPDELD 184

Query: 243 AAMGTMDGII 252
             +   D ++
Sbjct: 185 ELLPEADYVV 194

2-Hydroxyacid dehydrogenases catalyze the conversion of a wide variety of D-2-hydroxy acids to their corresponding keto acids. The general mechanism is (R)-lactate + acceptor to pyruvate + reduced acceptor. Formate/glycerate and related dehydrogenases of the D-specific 2-hydroxyacid dehydrogenase superfamily include groups such as formate dehydrogenase, glycerate dehydrogenase, L-alanine dehydrogenase, and S-adenosylhomocysteine hydrolase. Despite often low sequence identity, these proteins typically have a characteristic arrangement of 2 similar subdomains of the alpha/beta Rossmann fold NAD+ binding form. The NAD+ binding domain is inserted within the linear sequence of the mostly N-terminal catalytic domain, which has a similar domain structure to the internal NAD binding domain. Structurally, these domains are connected by extended alpha helices and create a cleft in which NAD is bound, primarily to the C-terminal portion of the 2nd (internal) domain. Some related proteins have similar structural subdomains but with a tandem arrangement of the catalytic and NAD-binding subdomains in the linear sequence. While many members of this family are dimeric, alanine DH is hexameric and phosphoglycerate DH is tetrameric. Formate dehydrogenase (FDH) catalyzes the NAD+-dependent oxidation of formate ion to carbon dioxide with the concomitant reduction of NAD+ to NADH. FDHs of this family contain no metal ions or prosthetic groups. Catalysis occurs though direct transfer of the hydride ion to NAD+ without the stages of acid-base catalysis typically found in related dehydrogenases. FDHs are found in all methylotrophic microorganisms in energy production and in the stress responses of plants. Length = 313

>gnl|CDD|217244 pfam02826, 2-Hacid_dh_C, D-isomer specific 2-hydroxyacid dehydrogenase, NAD binding domain

 Score = 43.2 bits (103), Expect = 5e-05
 Identities = 17/53 (32%), Positives = 27/53 (50%)

Query: 172 YSPLRFYGLDKPGMHVGVVGLGGLGHVAVKFAKAMGVKVTVISTSPSKKSEAI 224
           + P    G +  G  VG++GLG +G    +  KA G+KV      P  ++EA+
Sbjct: 23  WRPDALLGRELSGKTVGIIGLGRIGRAVARRLKAFGMKVIAYDRYPKAEAEAL 75

This domain is inserted into the catalytic domain, the large dehydrogenase and D-lactate dehydrogenase families in SCOP. N-terminal portion of which is represented by family pfam00389. Length = 175

>gnl|CDD|176209 cd08247, AST1_like, AST1 is a cytoplasmic protein associated with the periplasmic membrane in yeast

 Score = 43.8 bits (104), Expect = 8e-05
 Identities = 60/249 (24%), Positives = 94/249 (37%), Gaps = 63/249 (25%)

Query: 32  RRATGEKDVTFKVTHCGICHSDLHMIKNE--WGNTIYPIVPGHEIVGVVTEVGSKV-SKF 88
                + ++  KV    +   DL  + N   +   +     G +  GV+ +VGS V S++
Sbjct: 23  PNCYKDNEIVVKVHAAALNPVDL-KLYNSYTFHFKVKEKGLGRDYSGVIVKVGSNVASEW 81

Query: 89  KVGDKV-----GVGCMVGSCRSCDSCAIDLENYCPKVIMTYANKYHDGTITYGGYSDIMV 143
           KVGD+V           G+        +D     PK                        
Sbjct: 82  KVGDEVCGIYPHPYGGQGTL--SQYLLVD-----PKK----------------------- 111

Query: 144 ADEHFVVRIPEGTPLD-ATAPLLCAGITVYSPLRFYGLDKPGMHVG----VVGLGG---L 195
            D+  + R PE   L+ A A  L  G T Y       L+  G  +G    V+ LGG   +
Sbjct: 112 -DKKSITRKPENISLEEAAAWPLVLG-TAYQ-----ILEDLGQKLGPDSKVLVLGGSTSV 164

Query: 196 GHVAVKFAKAMGVKVTVISTSPSKKSEAIERLGADSFL-------VSRDQDEMQAAMGT- 247
           G  A++ AK      TV+ T  S+ +E  ++LGAD F+       V   +  ++   G  
Sbjct: 165 GRFAIQLAKNHYNIGTVVGTCSSRSAELNKKLGADHFIDYDAHSGVKLLKPVLENVKGQG 224

Query: 248 -MDGIIDTV 255
             D I+D V
Sbjct: 225 KFDLILDCV 233

This group contains members identified in targeting of yeast membrane proteins ATPase. AST1 is a cytoplasmic protein associated with the periplasmic membrane in yeast, identified as a multicopy suppressor of pma1 mutants which cause temperature sensitive growth arrest due to the inability of ATPase to target to the cell surface. This family is homologous to the medium chain family of dehydrogenases and reductases. Medium chain dehydrogenases/reductase (MDR)/zinc-dependent alcohol dehydrogenase-like family, which contains the zinc-dependent alcohol dehydrogenase (ADH-Zn) and related proteins, is a diverse group of proteins related to the first identified member, class I mammalian ADH. MDRs display a broad range of activities and are distinguished from the smaller short chain dehydrogenases (~ 250 amino acids vs. the ~ 350 amino acids of the MDR). The MDR proteins have 2 domains: a C-terminal NAD(P) binding-Rossmann fold domain of an beta-alpha form and an N-terminal catalytic domain with distant homology to GroES. Length = 352

>gnl|CDD|183914 PRK13243, PRK13243, glyoxylate reductase; Reviewed

 Score = 40.9 bits (96), Expect = 6e-04
 Identities = 20/61 (32%), Positives = 34/61 (55%), Gaps = 2/61 (3%)

Query: 170 TVYSPLRFYGLDKPGMHVGVVGLGGLGHVAVKFAKAMGVKVTVISTSPSKKSEAIERLGA 229
             + PL F G D  G  +G++G G +G    + AK  G++  ++  S ++K EA + LGA
Sbjct: 136 VAWHPLMFLGYDVYGKTIGIIGFGRIGQAVARRAKGFGMR--ILYYSRTRKPEAEKELGA 193

Query: 230 D 230
           +
Sbjct: 194 E 194

Length = 333

>gnl|CDD|240622 cd05198, formate_dh_like, Formate/glycerate and related dehydrogenases of the D-specific 2-hydroxy acid dehydrogenase family

 Score = 40.7 bits (96), Expect = 7e-04
 Identities = 20/57 (35%), Positives = 28/57 (49%), Gaps = 2/57 (3%)

Query: 174 PLRFYGLDKPGMHVGVVGLGGLGHVAVKFAKAMGVKVTVISTSPSKKSEAIERLGAD 230
              F G +  G  VG+VGLG +G    K  +A G+K  V+    ++K E  E LG  
Sbjct: 130 WAGFPGYELEGKTVGIVGLGRIGQRVAKRLQAFGMK--VLYYDRTRKPEPEEDLGFR 184

Formate dehydrogenase, D-specific 2-hydroxy acid dehydrogenase, Phosphoglycerate Dehydrogenase, Lactate dehydrogenase, Thermostable Phosphite Dehydrogenase, and Hydroxy(phenyl)pyruvate reductase, among others, share a characteristic arrangement of 2 similar subdomains of the alpha/beta Rossmann fold NAD+ binding form. 2-hydroxyacid dehydrogenases are enzymes that catalyze the conversion of a wide variety of D-2-hydroxy acids to their corresponding keto acids. The general mechanism is (R)-lactate + acceptor to pyruvate + reduced acceptor. The NAD+ binding domain is inserted within the linear sequence of the mostly N-terminal catalytic domain, which has a similar domain structure to the internal NAD binding domain. Structurally, these domains are connected by extended alpha helices and create a cleft in which NAD is bound, primarily to the C-terminal portion of the 2nd (internal) domain. Some related proteins have similar structural subdomain but with a tandem arrangement of the catalytic and NAD-binding subdomains in the linear sequence. Formate dehydrogenase (FDH) catalyzes the NAD+-dependent oxidation of formate ion to carbon dioxide with the concomitant reduction of NAD+ to NADH. FDHs of this family contain no metal ions or prosthetic groups. Catalysis occurs though direct transfer of hydride ion to NAD+ without the stages of acid-base catalysis typically found in related dehydrogenases. FDHs are found in all methylotrophic microorganisms in energy production and in the stress responses of plants. Formate/glycerate and related dehydrogenases of the D-specific 2-hydroxyacid dehydrogenase superfamily include groups such as formate dehydrogenase, glycerate dehydrogenase, L-alanine dehydrogenase, and S-Adenosylhomocysteine Hydrolase, among others. While many members of this family are dimeric, alanine DH is hexameric and phosphoglycerate DH is tetrameric. Length = 302

>gnl|CDD|240655 cd12178, 2-Hacid_dh_13, Putative D-isomer specific 2-hydroxyacid dehydrogenases, NAD-binding and catalytic domains

 Score = 39.9 bits (94), Expect = 0.001
 Identities = 20/59 (33%), Positives = 34/59 (57%), Gaps = 3/59 (5%)

Query: 173 SPLRFYGLDKPGMHVGVVGLGGLGHVAVKFAKAMGVKVTVISTSPSKKSEAIER-LGAD 230
           +PL F G +  G  +G++G+G +G    + AKA G+K  ++  +  + SE  E+ LGA 
Sbjct: 133 APLFFLGHELAGKTLGIIGMGRIGQAVARRAKAFGMK--ILYYNRHRLSEETEKELGAT 189

2-Hydroxyacid dehydrogenases catalyze the conversion of a wide variety of D-2-hydroxy acids to their corresponding keto acids. The general mechanism is (R)-lactate + acceptor to pyruvate + reduced acceptor. Formate/glycerate and related dehydrogenases of the D-specific 2-hydroxyacid dehydrogenase superfamily include groups such as formate dehydrogenase, glycerate dehydrogenase, L-alanine dehydrogenase, and S-adenosylhomocysteine hydrolase. Despite often low sequence identity, these proteins typically have a characteristic arrangement of 2 similar subdomains of the alpha/beta Rossmann fold NAD+ binding form. The NAD+ binding domain is inserted within the linear sequence of the mostly N-terminal catalytic domain, which has a similar domain structure to the internal NAD binding domain. Structurally, these domains are connected by extended alpha helices and create a cleft in which NAD is bound, primarily to the C-terminal portion of the 2nd (internal) domain. Some related proteins have similar structural subdomain but with a tandem arrangement of the catalytic and NAD-binding subdomains in the linear sequence. While many members of this family are dimeric, alanine DH is hexameric and phosphoglycerate DH is tetrameric. Length = 317

>gnl|CDD|223189 COG0111, SerA, Phosphoglycerate dehydrogenase and related dehydrogenases [Amino acid transport and metabolism]

 Score = 39.2 bits (92), Expect = 0.002
 Identities = 15/51 (29%), Positives = 24/51 (47%)

Query: 175 LRFYGLDKPGMHVGVVGLGGLGHVAVKFAKAMGVKVTVISTSPSKKSEAIE 225
             F G +  G  VG++GLG +G    K  KA G+KV        ++   ++
Sbjct: 133 KAFRGTELAGKTVGIIGLGRIGRAVAKRLKAFGMKVIGYDPYSPRERAGVD 183

Length = 324

Conserved Domains Detected by HHsearch

Original result of HHsearch against CDD database

ID	Length	Definition	Probability
Query	361
COG1064	339	AdhP Zn-dependent alcohol dehydrogenases [General	100.0
KOG0023	360	consensus Alcohol dehydrogenase, class V [Secondar	100.0
PLN02586	360	probable cinnamyl alcohol dehydrogenase	100.0
KOG0024	354	consensus Sorbitol dehydrogenase [Secondary metabo	100.0
PLN02178	375	cinnamyl-alcohol dehydrogenase	100.0
COG1062	366	AdhC Zn-dependent alcohol dehydrogenases, class II	100.0
PLN02514	357	cinnamyl-alcohol dehydrogenase	100.0
cd08281	371	liver_ADH_like1 Zinc-dependent alcohol dehydrogena	100.0
TIGR02822	329	adh_fam_2 zinc-binding alcohol dehydrogenase famil	100.0
KOG0022	375	consensus Alcohol dehydrogenase, class III [Second	100.0
PRK09880	343	L-idonate 5-dehydrogenase; Provisional	100.0
cd08239	339	THR_DH_like L-threonine dehydrogenase (TDH)-like.	100.0
PLN02827	378	Alcohol dehydrogenase-like	100.0
PLN02740	381	Alcohol dehydrogenase-like	100.0
TIGR03451	358	mycoS_dep_FDH mycothiol-dependent formaldehyde deh	100.0
COG0604	326	Qor NADPH:quinone reductase and related Zn-depende	100.0
COG1063	350	Tdh Threonine dehydrogenase and related Zn-depende	100.0
TIGR02818	368	adh_III_F_hyde S-(hydroxymethyl)glutathione dehydr	100.0
TIGR02819	393	fdhA_non_GSH formaldehyde dehydrogenase, glutathio	100.0
cd08301	369	alcohol_DH_plants Plant alcohol dehydrogenase. NAD	100.0
cd08277	365	liver_alcohol_DH_like Liver alcohol dehydrogenase.	100.0
TIGR03201	349	dearomat_had 6-hydroxycyclohex-1-ene-1-carbonyl-Co	100.0
cd08300	368	alcohol_DH_class_III class III alcohol dehydrogena	100.0
cd08230	355	glucose_DH Glucose dehydrogenase. Glucose dehydrog	100.0
PRK10309	347	galactitol-1-phosphate dehydrogenase; Provisional	100.0
cd08296	333	CAD_like Cinnamyl alcohol dehydrogenases (CAD). Ci	100.0
KOG1197	336	consensus Predicted quinone oxidoreductase [Energy	100.0
cd08237	341	ribitol-5-phosphate_DH ribitol-5-phosphate dehydro	100.0
cd05283	337	CAD1 Cinnamyl alcohol dehydrogenases (CAD). Cinnam	100.0
cd08231	361	MDR_TM0436_like Hypothetical enzyme TM0436 resembl	100.0
cd08233	351	butanediol_DH_like (2R,3R)-2,3-butanediol dehydrog	100.0
TIGR01202	308	bchC 2-desacetyl-2-hydroxyethyl bacteriochlorophyl	100.0
PRK10083	339	putative oxidoreductase; Provisional	100.0
cd08238	410	sorbose_phosphate_red L-sorbose-1-phosphate reduct	100.0
PRK09422	338	ethanol-active dehydrogenase/acetaldehyde-active r	100.0
cd08299	373	alcohol_DH_class_I_II_IV class I, II, IV alcohol d	100.0
cd08285	351	NADP_ADH NADP(H)-dependent alcohol dehydrogenases.	100.0
cd05284	340	arabinose_DH_like D-arabinose dehydrogenase. This	100.0
cd08246	393	crotonyl_coA_red crotonyl-CoA reductase. Crotonyl-	100.0
TIGR01751	398	crot-CoA-red crotonyl-CoA reductase. The enzyme mo	100.0
cd08283	386	FDH_like_1 Glutathione-dependent formaldehyde dehy	100.0
PRK13771	334	putative alcohol dehydrogenase; Provisional	100.0
cd08278	365	benzyl_alcohol_DH Benzyl alcohol dehydrogenase. Be	100.0
cd08260	345	Zn_ADH6 Alcohol dehydrogenases of the MDR family.	100.0
KOG0025	354	consensus Zn2+-binding dehydrogenase (nuclear rece	100.0
cd08240	350	6_hydroxyhexanoate_dh_like 6-hydroxyhexanoate dehy	100.0
cd08291	324	ETR_like_1 2-enoyl thioester reductase (ETR) like	100.0
cd05279	365	Zn_ADH1 Liver alcohol dehydrogenase and related zi	100.0
cd08256	350	Zn_ADH2 Alcohol dehydrogenases of the MDR family.	100.0
cd08245	330	CAD Cinnamyl alcohol dehydrogenases (CAD) and rela	100.0
PLN03154	348	putative allyl alcohol dehydrogenase; Provisional	100.0
cd08264	325	Zn_ADH_like2 Alcohol dehydrogenases of the MDR fam	100.0
cd08297	341	CAD3 Cinnamyl alcohol dehydrogenases (CAD). These	100.0
cd05278	347	FDH_like Formaldehyde dehydrogenases. Formaldehyde	100.0
cd08298	329	CAD2 Cinnamyl alcohol dehydrogenases (CAD). These	100.0
cd08254	338	hydroxyacyl_CoA_DH 6-hydroxycyclohex-1-ene-1-carbo	100.0
cd08282	375	PFDH_like Pseudomonas putida aldehyde-dismutating	100.0
cd08259	332	Zn_ADH5 Alcohol dehydrogenases of the MDR family.	100.0
cd08279	363	Zn_ADH_class_III Class III alcohol dehydrogenase.	100.0
cd08286	345	FDH_like_ADH2 formaldehyde dehydrogenase (FDH)-lik	100.0
cd08263	367	Zn_ADH10 Alcohol dehydrogenases of the MDR family.	100.0
cd08266	342	Zn_ADH_like1 Alcohol dehydrogenases of the MDR fam	100.0
cd08261	337	Zn_ADH7 Alcohol dehydrogenases of the MDR family.	100.0
cd08265	384	Zn_ADH3 Alcohol dehydrogenases of the MDR family.	100.0
cd08287	345	FDH_like_ADH3 formaldehyde dehydrogenase (FDH)-lik	100.0
PRK05396	341	tdh L-threonine 3-dehydrogenase; Validated	100.0
cd08284	344	FDH_like_2 Glutathione-dependent formaldehyde dehy	100.0
PLN02702	364	L-idonate 5-dehydrogenase	100.0
TIGR03366	280	HpnZ_proposed putative phosphonate catabolism asso	100.0
cd08242	319	MDR_like Medium chain dehydrogenases/reductase (MD	100.0
cd08262	341	Zn_ADH8 Alcohol dehydrogenases of the MDR family.	100.0
cd08292	324	ETR_like_2 2-enoyl thioester reductase (ETR) like	100.0
cd08295	338	double_bond_reductase_like Arabidopsis alkenal dou	100.0
cd08232	339	idonate-5-DH L-idonate 5-dehydrogenase. L-idonate	100.0
cd08235	343	iditol_2_DH_like L-iditol 2-dehydrogenase. Putativ	100.0
cd08274	350	MDR9 Medium chain dehydrogenases/reductase (MDR)/z	100.0
cd05285	343	sorbitol_DH Sorbitol dehydrogenase. Sorbitol and a	100.0
cd08293	345	PTGR2 Prostaglandin reductase. Prostaglandins and	100.0
TIGR02825	325	B4_12hDH leukotriene B4 12-hydroxydehydrogenase/15	100.0
cd08236	343	sugar_DH NAD(P)-dependent sugar dehydrogenases. Th	100.0
cd08258	306	Zn_ADH4 Alcohol dehydrogenases of the MDR family.	100.0
cd08294	329	leukotriene_B4_DH_like 13-PGR is a bifunctional en	100.0
cd05281	341	TDH Threonine dehydrogenase. L-threonine dehydroge	100.0
TIGR02817	336	adh_fam_1 zinc-binding alcohol dehydrogenase famil	100.0
cd08234	334	threonine_DH_like L-threonine dehydrogenase. L-thr	100.0
cd08290	341	ETR 2-enoyl thioester reductase (ETR). 2-enoyl thi	100.0
TIGR00692	340	tdh L-threonine 3-dehydrogenase. E. coli His-90 mo	100.0
cd08276	336	MDR7 Medium chain dehydrogenases/reductase (MDR)/z	100.0
PRK10754	327	quinone oxidoreductase, NADPH-dependent; Provision	100.0
cd08244	324	MDR_enoyl_red Possible enoyl reductase. Member ide	100.0
PTZ00354	334	alcohol dehydrogenase; Provisional	100.0
cd08270	305	MDR4 Medium chain dehydrogenases/reductase (MDR)/z	100.0
cd05280	325	MDR_yhdh_yhfp Yhdh and yhfp-like putative quinone	100.0
TIGR02823	323	oxido_YhdH putative quinone oxidoreductase, YhdH/Y	100.0
KOG1198	347	consensus Zinc-binding oxidoreductase [Energy prod	100.0
cd08250	329	Mgc45594_like Mgc45594 gene product and other MDR	100.0
cd05282	323	ETR_like 2-enoyl thioester reductase-like. 2-enoyl	100.0
cd08289	326	MDR_yhfp_like Yhfp putative quinone oxidoreductase	100.0
cd08243	320	quinone_oxidoreductase_like_1 Quinone oxidoreducta	100.0
COG2130	340	Putative NADP-dependent oxidoreductases [General f	100.0
cd08252	336	AL_MDR Arginate lyase and other MDR family members	100.0
cd08249	339	enoyl_reductase_like enoyl_reductase_like. Member	100.0
cd08248	350	RTN4I1 Human Reticulon 4 Interacting Protein 1. Hu	100.0
cd08269	312	Zn_ADH9 Alcohol dehydrogenases of the MDR family.	100.0
cd08288	324	MDR_yhdh Yhdh putative quinone oxidoreductases. Yh	100.0
cd05276	323	p53_inducible_oxidoreductase PIG3 p53-inducible qu	100.0
cd08253	325	zeta_crystallin Zeta-crystallin with NADP-dependen	100.0
cd05288	329	PGDH Prostaglandin dehydrogenases. Prostaglandins	100.0
cd08273	331	MDR8 Medium chain dehydrogenases/reductase (MDR)/z	100.0
cd05188	271	MDR Medium chain reductase/dehydrogenase (MDR)/zin	100.0
cd05286	320	QOR2 Quinone oxidoreductase (QOR). Quinone oxidore	100.0
cd08272	326	MDR6 Medium chain dehydrogenases/reductase (MDR)/z	100.0
cd08247	352	AST1_like AST1 is a cytoplasmic protein associated	100.0
cd08271	325	MDR5 Medium chain dehydrogenases/reductase (MDR)/z	100.0
TIGR02824	325	quinone_pig3 putative NAD(P)H quinone oxidoreducta	100.0
cd05289	309	MDR_like_2 alcohol dehydrogenase and quinone reduc	100.0
cd08268	328	MDR2 Medium chain dehydrogenases/reductase (MDR)/z	100.0
cd08267	319	MDR1 Medium chain dehydrogenases/reductase (MDR)/z	100.0
cd08241	323	QOR1 Quinone oxidoreductase (QOR). QOR catalyzes t	100.0
cd08251	303	polyketide_synthase polyketide synthase. Polyketid	100.0
cd08275	337	MDR3 Medium chain dehydrogenases/reductase (MDR)/z	100.0
cd05195	293	enoyl_red enoyl reductase of polyketide synthase.	99.98
smart00829	288	PKS_ER Enoylreductase. Enoylreductase in Polyketid	99.97
KOG1196	343	consensus Predicted NAD-dependent oxidoreductase [	99.96
cd08255	277	2-desacetyl-2-hydroxyethyl_bacteriochlorophyllide_	99.96
KOG1202	2376	consensus Animal-type fatty acid synthase and rela	99.95
PF08240	109	ADH_N: Alcohol dehydrogenase GroES-like domain; In	99.91
PF00107	130	ADH_zinc_N: Zinc-binding dehydrogenase; InterPro:	99.72
cd00401	413	AdoHcyase S-adenosyl-L-homocysteine hydrolase (Ado	99.53
PF13602	127	ADH_zinc_N_2: Zinc-binding dehydrogenase; PDB: 3TQ	99.5
PRK09424	509	pntA NAD(P) transhydrogenase subunit alpha; Provis	99.4
PRK05476	425	S-adenosyl-L-homocysteine hydrolase; Provisional	98.66
PRK11873	272	arsM arsenite S-adenosylmethyltransferase; Reviewe	98.64
TIGR01035	417	hemA glutamyl-tRNA reductase. This enzyme, togethe	98.63
PRK08306	296	dipicolinate synthase subunit A; Reviewed	98.61
TIGR00561	511	pntA NAD(P) transhydrogenase, alpha subunit. In so	98.61
TIGR00518	370	alaDH alanine dehydrogenase. The family of known L	98.47
TIGR00936	406	ahcY adenosylhomocysteinase. This enzyme hydrolyze	98.38
PRK12771	564	putative glutamate synthase (NADPH) small subunit;	98.35
PLN02494	477	adenosylhomocysteinase	98.34
PRK00045	423	hemA glutamyl-tRNA reductase; Reviewed	98.19
cd05213	311	NAD_bind_Glutamyl_tRNA_reduct NADP-binding domain	98.18
COG4221	246	Short-chain alcohol dehydrogenase of unknown speci	98.14
TIGR02853	287	spore_dpaA dipicolinic acid synthetase, A subunit.	98.14
PTZ00075	476	Adenosylhomocysteinase; Provisional	98.14
PRK08324	681	short chain dehydrogenase; Validated	98.06
PF01488	135	Shikimate_DH: Shikimate / quinate 5-dehydrogenase;	98.0
PRK00517	250	prmA ribosomal protein L11 methyltransferase; Revi	97.99
COG0300	265	DltE Short-chain dehydrogenases of various substra	97.76
PLN03209	576	translocon at the inner envelope of chloroplast su	97.7
COG2518	209	Pcm Protein-L-isoaspartate carboxylmethyltransfera	97.66
PRK12742	237	oxidoreductase; Provisional	97.6
COG1748	389	LYS9 Saccharopine dehydrogenase and related protei	97.58
PF00670	162	AdoHcyase_NAD: S-adenosyl-L-homocysteine hydrolase	97.58
PF11017	314	DUF2855: Protein of unknown function (DUF2855); In	97.54
KOG1209	289	consensus 1-Acyl dihydroxyacetone phosphate reduct	97.49
PF13460	183	NAD_binding_10: NADH(P)-binding ; PDB: 3OH8_A 3E8X	97.45
PF02826	178	2-Hacid_dh_C: D-isomer specific 2-hydroxyacid dehy	97.44
PRK05786	238	fabG 3-ketoacyl-(acyl-carrier-protein) reductase;	97.44
cd01080	168	NAD_bind_m-THF_DH_Cyclohyd NADP binding domain of	97.44
PRK14175	286	bifunctional 5,10-methylene-tetrahydrofolate dehyd	97.42
PRK06182	273	short chain dehydrogenase; Validated	97.36
KOG1205	282	consensus Predicted dehydrogenase [Secondary metab	97.35
COG0686	371	Ald Alanine dehydrogenase [Amino acid transport an	97.35
cd01078	194	NAD_bind_H4MPT_DH NADP binding domain of methylene	97.31
TIGR01318	467	gltD_gamma_fam glutamate synthase small subunit fa	97.29
cd01065	155	NAD_bind_Shikimate_DH NAD(P) binding domain of Shi	97.28
PRK05693	274	short chain dehydrogenase; Provisional	97.28
PRK08265	261	short chain dehydrogenase; Provisional	97.28
PRK07109	334	short chain dehydrogenase; Provisional	97.28
COG3967	245	DltE Short-chain dehydrogenase involved in D-alani	97.24
PRK06139	330	short chain dehydrogenase; Provisional	97.22
PRK08339	263	short chain dehydrogenase; Provisional	97.22
PRK08618	325	ornithine cyclodeaminase; Validated	97.21
PRK05872	296	short chain dehydrogenase; Provisional	97.2
PRK12939	250	short chain dehydrogenase; Provisional	97.2
PRK08261	450	fabG 3-ketoacyl-(acyl-carrier-protein) reductase;	97.16
TIGR00406	288	prmA ribosomal protein L11 methyltransferase. Ribo	97.15
PRK00377	198	cbiT cobalt-precorrin-6Y C(15)-methyltransferase;	97.15
PRK07060	245	short chain dehydrogenase; Provisional	97.14
PRK05993	277	short chain dehydrogenase; Provisional	97.14
PF12847	112	Methyltransf_18: Methyltransferase domain; PDB: 3G	97.13
PRK00258	278	aroE shikimate 5-dehydrogenase; Reviewed	97.09
PRK13940	414	glutamyl-tRNA reductase; Provisional	97.07
PRK14192	283	bifunctional 5,10-methylene-tetrahydrofolate dehyd	97.06
PRK06484	520	short chain dehydrogenase; Validated	97.05
PRK12548	289	shikimate 5-dehydrogenase; Provisional	97.05
TIGR01809	282	Shik-DH-AROM shikimate-5-dehydrogenase, fungal ARO	97.05
PRK07326	237	short chain dehydrogenase; Provisional	97.03
TIGR01470	205	cysG_Nterm siroheme synthase, N-terminal domain. T	97.03
PRK07806	248	short chain dehydrogenase; Provisional	97.02
cd01075	200	NAD_bind_Leu_Phe_Val_DH NAD(P) binding domain of l	97.01
PRK06057	255	short chain dehydrogenase; Provisional	97.01
PF03435	386	Saccharop_dh: Saccharopine dehydrogenase ; InterPr	97.0
COG2242	187	CobL Precorrin-6B methylase 2 [Coenzyme metabolism	96.98
PRK12829	264	short chain dehydrogenase; Provisional	96.95
PRK12367	245	short chain dehydrogenase; Provisional	96.93
TIGR00507	270	aroE shikimate 5-dehydrogenase. This model finds p	96.93
PRK08415	274	enoyl-(acyl carrier protein) reductase; Provisiona	96.92
PRK08267	260	short chain dehydrogenase; Provisional	96.92
COG0169	283	AroE Shikimate 5-dehydrogenase [Amino acid transpo	96.92
PF01262	168	AlaDh_PNT_C: Alanine dehydrogenase/PNT, C-terminal	96.91
PRK11705	383	cyclopropane fatty acyl phospholipid synthase; Pro	96.91
PRK06200	263	2,3-dihydroxy-2,3-dihydrophenylpropionate dehydrog	96.91
PRK12429	258	3-hydroxybutyrate dehydrogenase; Provisional	96.9
PRK03369	488	murD UDP-N-acetylmuramoyl-L-alanyl-D-glutamate syn	96.87
COG1052	324	LdhA Lactate dehydrogenase and related dehydrogena	96.87
PRK12549	284	shikimate 5-dehydrogenase; Reviewed	96.87
PRK14194	301	bifunctional 5,10-methylene-tetrahydrofolate dehyd	96.86
PRK06500	249	short chain dehydrogenase; Provisional	96.85
PRK07814	263	short chain dehydrogenase; Provisional	96.85
TIGR02992	326	ectoine_eutC ectoine utilization protein EutC. Mem	96.84
PRK07340	304	ornithine cyclodeaminase; Validated	96.84
PRK07832	272	short chain dehydrogenase; Provisional	96.83
PRK07825	273	short chain dehydrogenase; Provisional	96.83
PRK05866	293	short chain dehydrogenase; Provisional	96.83
PRK14191	285	bifunctional 5,10-methylene-tetrahydrofolate dehyd	96.82
PRK13394	262	3-hydroxybutyrate dehydrogenase; Provisional	96.79
PRK12809	639	putative oxidoreductase Fe-S binding subunit; Revi	96.79
PRK06718	202	precorrin-2 dehydrogenase; Reviewed	96.79
PRK07063	260	short chain dehydrogenase; Provisional	96.77
CHL00194	317	ycf39 Ycf39; Provisional	96.74
COG0373	414	HemA Glutamyl-tRNA reductase [Coenzyme metabolism]	96.74
PF13241	103	NAD_binding_7: Putative NAD(P)-binding; PDB: 3DFZ_	96.74
TIGR03325	262	BphB_TodD cis-2,3-dihydrobiphenyl-2,3-diol dehydro	96.73
PRK06128	300	oxidoreductase; Provisional	96.73
PRK07424	406	bifunctional sterol desaturase/short chain dehydro	96.73
PRK06180	277	short chain dehydrogenase; Provisional	96.73
PRK06196	315	oxidoreductase; Provisional	96.72
PRK06141	314	ornithine cyclodeaminase; Validated	96.72
PRK14189	285	bifunctional 5,10-methylene-tetrahydrofolate dehyd	96.72
PRK14027	283	quinate/shikimate dehydrogenase; Provisional	96.71
PRK10792	285	bifunctional 5,10-methylene-tetrahydrofolate dehyd	96.71
PRK12749	288	quinate/shikimate dehydrogenase; Reviewed	96.71
PRK07062	265	short chain dehydrogenase; Provisional	96.7
cd05212	140	NAD_bind_m-THF_DH_Cyclohyd_like NAD(P) binding dom	96.69
PRK07831	262	short chain dehydrogenase; Provisional	96.69
PRK13943	322	protein-L-isoaspartate O-methyltransferase; Provis	96.69
PRK05867	253	short chain dehydrogenase; Provisional	96.68
PRK07576	264	short chain dehydrogenase; Provisional	96.67
PF02882	160	THF_DHG_CYH_C: Tetrahydrofolate dehydrogenase/cycl	96.67
PRK09291	257	short chain dehydrogenase; Provisional	96.67
PRK06194	287	hypothetical protein; Provisional	96.66
PRK05717	255	oxidoreductase; Validated	96.65
PRK05876	275	short chain dehydrogenase; Provisional	96.64
PRK07502	307	cyclohexadienyl dehydrogenase; Validated	96.64
PF01135	209	PCMT: Protein-L-isoaspartate(D-aspartate) O-methyl	96.63
PRK08217	253	fabG 3-ketoacyl-(acyl-carrier-protein) reductase;	96.63
PRK05854	313	short chain dehydrogenase; Provisional	96.62
PRK12828	239	short chain dehydrogenase; Provisional	96.62
PRK08263	275	short chain dehydrogenase; Provisional	96.62
PLN02253	280	xanthoxin dehydrogenase	96.6
PRK06949	258	short chain dehydrogenase; Provisional	96.6
PRK07890	258	short chain dehydrogenase; Provisional	96.58
PRK07478	254	short chain dehydrogenase; Provisional	96.58
PRK06940	275	short chain dehydrogenase; Provisional	96.58
PRK07574	385	formate dehydrogenase; Provisional	96.57
PRK09072	263	short chain dehydrogenase; Provisional	96.57
PRK06719	157	precorrin-2 dehydrogenase; Validated	96.57
PRK07523	255	gluconate 5-dehydrogenase; Provisional	96.56
PRK07453	322	protochlorophyllide oxidoreductase; Validated	96.55
PRK05884	223	short chain dehydrogenase; Provisional	96.55
PRK06484	520	short chain dehydrogenase; Validated	96.54
PRK08594	257	enoyl-(acyl carrier protein) reductase; Provisiona	96.54
COG2423	330	Predicted ornithine cyclodeaminase, mu-crystallin	96.51
PRK06505	271	enoyl-(acyl carrier protein) reductase; Provisiona	96.51
PLN03139	386	formate dehydrogenase; Provisional	96.51
cd05311	226	NAD_bind_2_malic_enz NAD(P) binding domain of mali	96.49
PRK07231	251	fabG 3-ketoacyl-(acyl-carrier-protein) reductase;	96.48
PRK09186	256	flagellin modification protein A; Provisional	96.47
KOG1201	300	consensus Hydroxysteroid 17-beta dehydrogenase 11	96.42
PRK12550	272	shikimate 5-dehydrogenase; Reviewed	96.42
PRK06483	236	dihydromonapterin reductase; Provisional	96.42
PLN00203	519	glutamyl-tRNA reductase	96.41
PRK09242	257	tropinone reductase; Provisional	96.4
PRK07677	252	short chain dehydrogenase; Provisional	96.4
PRK08589	272	short chain dehydrogenase; Validated	96.39
PRK07985	294	oxidoreductase; Provisional	96.39
PRK08862	227	short chain dehydrogenase; Provisional	96.38
TIGR02469	124	CbiT precorrin-6Y C5,15-methyltransferase (decarbo	96.38
PRK14188	296	bifunctional 5,10-methylene-tetrahydrofolate dehyd	96.36
PRK12747	252	short chain dehydrogenase; Provisional	96.35
PRK07024	257	short chain dehydrogenase; Provisional	96.35
PRK08643	256	acetoin reductase; Validated	96.34
COG1648	210	CysG Siroheme synthase (precorrin-2 oxidase/ferroc	96.33
PRK05875	276	short chain dehydrogenase; Provisional	96.32
COG0334	411	GdhA Glutamate dehydrogenase/leucine dehydrogenase	96.32
PRK07067	257	sorbitol dehydrogenase; Provisional	96.31
PRK07666	239	fabG 3-ketoacyl-(acyl-carrier-protein) reductase;	96.29
PRK06101	240	short chain dehydrogenase; Provisional	96.29
PRK06138	252	short chain dehydrogenase; Provisional	96.29
PRK13942	212	protein-L-isoaspartate O-methyltransferase; Provis	96.29
PRK07774	250	short chain dehydrogenase; Provisional	96.28
PRK14178	279	bifunctional 5,10-methylene-tetrahydrofolate dehyd	96.28
PRK10538	248	malonic semialdehyde reductase; Provisional	96.27
PRK05653	246	fabG 3-ketoacyl-(acyl-carrier-protein) reductase;	96.27
PRK08340	259	glucose-1-dehydrogenase; Provisional	96.27
PRK06398	258	aldose dehydrogenase; Validated	96.27
PRK06125	259	short chain dehydrogenase; Provisional	96.27
PRK12936	245	3-ketoacyl-(acyl-carrier-protein) reductase NodG;	96.26
PRK08085	254	gluconate 5-dehydrogenase; Provisional	96.25
PRK06181	263	short chain dehydrogenase; Provisional	96.25
PRK13944	205	protein-L-isoaspartate O-methyltransferase; Provis	96.24
PF02670	129	DXP_reductoisom: 1-deoxy-D-xylulose 5-phosphate re	96.24
PRK12481	251	2-deoxy-D-gluconate 3-dehydrogenase; Provisional	96.23
PRK07370	258	enoyl-(acyl carrier protein) reductase; Validated	96.23
PF02353	273	CMAS: Mycolic acid cyclopropane synthetase; InterP	96.22
PRK06463	255	fabG 3-ketoacyl-(acyl-carrier-protein) reductase;	96.22
PRK08213	259	gluconate 5-dehydrogenase; Provisional	96.22
PRK14176	287	bifunctional 5,10-methylene-tetrahydrofolate dehyd	96.22
cd01079	197	NAD_bind_m-THF_DH NAD binding domain of methylene-	96.21
COG2230	283	Cfa Cyclopropane fatty acid synthase and related m	96.21
PLN00141	251	Tic62-NAD(P)-related group II protein; Provisional	96.2
PRK12937	245	short chain dehydrogenase; Provisional	96.2
PRK08017	256	oxidoreductase; Provisional	96.2
PRK07904	253	short chain dehydrogenase; Provisional	96.19
cd05211	217	NAD_bind_Glu_Leu_Phe_Val NAD(P) binding domain of	96.19
PRK08291	330	ectoine utilization protein EutC; Validated	96.18
TIGR03589	324	PseB UDP-N-acetylglucosamine 4,6-dehydratase. This	96.18
PRK14172	278	bifunctional 5,10-methylene-tetrahydrofolate dehyd	96.18
PRK06720	169	hypothetical protein; Provisional	96.18
PF03807	96	F420_oxidored: NADP oxidoreductase coenzyme F420-d	96.17
PRK08177	225	short chain dehydrogenase; Provisional	96.16
PRK14982	340	acyl-ACP reductase; Provisional	96.16
PRK14179	284	bifunctional 5,10-methylene-tetrahydrofolate dehyd	96.15
PRK14177	284	bifunctional 5,10-methylene-tetrahydrofolate dehyd	96.15
PRK06841	255	short chain dehydrogenase; Provisional	96.13
PRK06603	260	enoyl-(acyl carrier protein) reductase; Provisiona	96.12
PRK06823	315	ornithine cyclodeaminase; Validated	96.12
PRK08277	278	D-mannonate oxidoreductase; Provisional	96.12
PRK07069	251	short chain dehydrogenase; Validated	96.12
PRK12746	254	short chain dehydrogenase; Provisional	96.11
PRK06197	306	short chain dehydrogenase; Provisional	96.1
PRK07533	258	enoyl-(acyl carrier protein) reductase; Provisiona	96.09
PLN02780	320	ketoreductase/ oxidoreductase	96.08
PTZ00079	454	NADP-specific glutamate dehydrogenase; Provisional	96.08
PRK15469	312	ghrA bifunctional glyoxylate/hydroxypyruvate reduc	96.07
PRK06701	290	short chain dehydrogenase; Provisional	96.07
TIGR03840	213	TMPT_Se_Te thiopurine S-methyltransferase, Se/Te d	96.06
PRK07035	252	short chain dehydrogenase; Provisional	96.06
PRK06482	276	short chain dehydrogenase; Provisional	96.05
PRK08159	272	enoyl-(acyl carrier protein) reductase; Provisiona	96.04
PRK07097	265	gluconate 5-dehydrogenase; Provisional	96.03
PRK06172	253	short chain dehydrogenase; Provisional	96.03
COG2264	300	PrmA Ribosomal protein L11 methylase [Translation,	96.03
PRK14190	284	bifunctional 5,10-methylene-tetrahydrofolate dehyd	96.02
COG2910	211	Putative NADH-flavin reductase [General function p	96.02
PRK07074	257	short chain dehydrogenase; Provisional	96.01
PRK12826	251	3-ketoacyl-(acyl-carrier-protein) reductase; Revie	96.0
PRK06935	258	2-deoxy-D-gluconate 3-dehydrogenase; Provisional	96.0
PRK14180	282	bifunctional 5,10-methylene-tetrahydrofolate dehyd	96.0
PRK14169	282	bifunctional 5,10-methylene-tetrahydrofolate dehyd	95.98
PRK06124	256	gluconate 5-dehydrogenase; Provisional	95.96
PLN02989	325	cinnamyl-alcohol dehydrogenase family protein	95.96
PLN02928	347	oxidoreductase family protein	95.95
PF10727	127	Rossmann-like: Rossmann-like domain; InterPro: IPR	95.94
PRK12475	338	thiamine/molybdopterin biosynthesis MoeB-like prot	95.93
TIGR01832	248	kduD 2-deoxy-D-gluconate 3-dehydrogenase. This mod	95.91
PRK06198	260	short chain dehydrogenase; Provisional	95.91
PRK08251	248	short chain dehydrogenase; Provisional	95.91
PRK14173	287	bifunctional 5,10-methylene-tetrahydrofolate dehyd	95.91
TIGR02356	202	adenyl_thiF thiazole biosynthesis adenylyltransfer	95.91
PF05368	233	NmrA: NmrA-like family; InterPro: IPR008030 NmrA i	95.88
PRK08703	239	short chain dehydrogenase; Provisional	95.87
PRK13243	333	glyoxylate reductase; Reviewed	95.87
PRK15181	348	Vi polysaccharide biosynthesis protein TviC; Provi	95.87
PRK07454	241	short chain dehydrogenase; Provisional	95.86
PRK06079	252	enoyl-(acyl carrier protein) reductase; Provisiona	95.85
PRK04457	262	spermidine synthase; Provisional	95.84
PRK10258	251	biotin biosynthesis protein BioC; Provisional	95.84
PRK14170	284	bifunctional 5,10-methylene-tetrahydrofolate dehyd	95.84
PRK05447	385	1-deoxy-D-xylulose 5-phosphate reductoisomerase; P	95.83
PRK06914	280	short chain dehydrogenase; Provisional	95.83
PRK14186	297	bifunctional 5,10-methylene-tetrahydrofolate dehyd	95.82
PRK08628	258	short chain dehydrogenase; Provisional	95.82
PLN02516	299	methylenetetrahydrofolate dehydrogenase (NADP+)	95.82
PRK06113	255	7-alpha-hydroxysteroid dehydrogenase; Validated	95.81
PRK05562	223	precorrin-2 dehydrogenase; Provisional	95.81
PRK14166	282	bifunctional 5,10-methylene-tetrahydrofolate dehyd	95.81
PRK07889	256	enoyl-(acyl carrier protein) reductase; Provisiona	95.8
COG2226	238	UbiE Methylase involved in ubiquinone/menaquinone	95.79
PLN02986	322	cinnamyl-alcohol dehydrogenase family protein	95.79
PRK07791	286	short chain dehydrogenase; Provisional	95.78
PRK14187	294	bifunctional 5,10-methylene-tetrahydrofolate dehyd	95.77
TIGR01289	314	LPOR light-dependent protochlorophyllide reductase	95.77
PRK07775	274	short chain dehydrogenase; Provisional	95.76
PRK05565	247	fabG 3-ketoacyl-(acyl-carrier-protein) reductase;	95.76
TIGR00080	215	pimt protein-L-isoaspartate(D-aspartate) O-methylt	95.76
PLN02896	353	cinnamyl-alcohol dehydrogenase	95.76
KOG1210	331	consensus Predicted 3-ketosphinganine reductase [S	95.74
KOG0725	270	consensus Reductases with broad range of substrate	95.74
TIGR01532	325	E4PD_g-proteo D-erythrose-4-phosphate dehydrogenas	95.72
cd05313	254	NAD_bind_2_Glu_DH NAD(P) binding domain of glutama	95.72
TIGR01963	255	PHB_DH 3-hydroxybutyrate dehydrogenase. This model	95.72
PRK12384	259	sorbitol-6-phosphate dehydrogenase; Provisional	95.7
PRK13656	398	trans-2-enoyl-CoA reductase; Provisional	95.69
smart00846	149	Gp_dh_N Glyceraldehyde 3-phosphate dehydrogenase,	95.67
KOG1014	312	consensus 17 beta-hydroxysteroid dehydrogenase typ	95.67
TIGR02371	325	ala_DH_arch alanine dehydrogenase, Archaeoglobus f	95.67
PRK07984	262	enoyl-(acyl carrier protein) reductase; Provisiona	95.67
PRK14183	281	bifunctional 5,10-methylene-tetrahydrofolate dehyd	95.66
PRK08300	302	acetaldehyde dehydrogenase; Validated	95.65
PRK05650	270	short chain dehydrogenase; Provisional	95.65
PF03446	163	NAD_binding_2: NAD binding domain of 6-phosphogluc	95.6
PRK00107	187	gidB 16S rRNA methyltransferase GidB; Reviewed	95.6
TIGR02622	349	CDP_4_6_dhtase CDP-glucose 4,6-dehydratase. Member	95.6
PRK14171	288	bifunctional 5,10-methylene-tetrahydrofolate dehyd	95.6
PRK13255	218	thiopurine S-methyltransferase; Reviewed	95.6
PRK12769	654	putative oxidoreductase Fe-S binding subunit; Revi	95.6
PRK08655	437	prephenate dehydrogenase; Provisional	95.59
PLN02897	345	tetrahydrofolate dehydrogenase/cyclohydrolase, put	95.59
PRK08303	305	short chain dehydrogenase; Provisional	95.59
PLN02819	1042	lysine-ketoglutarate reductase/saccharopine dehydr	95.59
PRK06179	270	short chain dehydrogenase; Provisional	95.59
PRK09135	249	pteridine reductase; Provisional	95.58
PRK12823	260	benD 1,6-dihydroxycyclohexa-2,4-diene-1-carboxylat	95.57
TIGR00438	188	rrmJ cell division protein FtsJ.	95.57
PRK08416	260	7-alpha-hydroxysteroid dehydrogenase; Provisional	95.57
PRK08261	450	fabG 3-ketoacyl-(acyl-carrier-protein) reductase;	95.56
PRK06077	252	fabG 3-ketoacyl-(acyl-carrier-protein) reductase;	95.54
PLN02616	364	tetrahydrofolate dehydrogenase/cyclohydrolase, put	95.54
PF07991	165	IlvN: Acetohydroxy acid isomeroreductase, catalyti	95.54
PF02737	180	3HCDH_N: 3-hydroxyacyl-CoA dehydrogenase, NAD bind	95.54
PF00106	167	adh_short: short chain dehydrogenase alcohol dehyd	95.53
TIGR02632	676	RhaD_aldol-ADH rhamnulose-1-phosphate aldolase/alc	95.52
TIGR03206	250	benzo_BadH 2-hydroxycyclohexanecarboxyl-CoA dehydr	95.52
PRK08264	238	short chain dehydrogenase; Validated	95.51
PRK08278	273	short chain dehydrogenase; Provisional	95.51
PLN02730	303	enoyl-[acyl-carrier-protein] reductase	95.48
PRK12480	330	D-lactate dehydrogenase; Provisional	95.48
COG3288	356	PntA NAD/NADP transhydrogenase alpha subunit [Ener	95.47
PRK08063	250	enoyl-(acyl carrier protein) reductase; Provisiona	95.47
PRK06046	326	alanine dehydrogenase; Validated	95.47
PRK08690	261	enoyl-(acyl carrier protein) reductase; Provisiona	95.47
PRK08945	247	putative oxoacyl-(acyl carrier protein) reductase;	95.46
PRK14185	293	bifunctional 5,10-methylene-tetrahydrofolate dehyd	95.44
PRK14618	328	NAD(P)H-dependent glycerol-3-phosphate dehydrogena	95.43
PRK08219	227	short chain dehydrogenase; Provisional	95.42
PLN02520	529	bifunctional 3-dehydroquinate dehydratase/shikimat	95.4
PRK07856	252	short chain dehydrogenase; Provisional	95.38
PRK12938	246	acetyacetyl-CoA reductase; Provisional	95.38
COG0569	225	TrkA K+ transport systems, NAD-binding component [	95.37
PLN02657	390	3,8-divinyl protochlorophyllide a 8-vinyl reductas	95.37
PRK01438	480	murD UDP-N-acetylmuramoyl-L-alanyl-D-glutamate syn	95.36
PRK14184	286	bifunctional 5,10-methylene-tetrahydrofolate dehyd	95.35
PRK06997	260	enoyl-(acyl carrier protein) reductase; Provisiona	95.35
PRK07688	339	thiamine/molybdopterin biosynthesis ThiF/MoeB-like	95.34
PRK14193	284	bifunctional 5,10-methylene-tetrahydrofolate dehyd	95.33
PF01118	121	Semialdhyde_dh: Semialdehyde dehydrogenase, NAD bi	95.32
PRK14182	282	bifunctional 5,10-methylene-tetrahydrofolate dehyd	95.32
KOG1199	260	consensus Short-chain alcohol dehydrogenase/3-hydr	95.32
PRK05557	248	fabG 3-ketoacyl-(acyl-carrier-protein) reductase;	95.31
PRK07102	243	short chain dehydrogenase; Provisional	95.31
PRK06114	254	short chain dehydrogenase; Provisional	95.3
PRK06953	222	short chain dehydrogenase; Provisional	95.28
PRK09310	477	aroDE bifunctional 3-dehydroquinate dehydratase/sh	95.28
PRK14181	287	bifunctional 5,10-methylene-tetrahydrofolate dehyd	95.27
PRK14167	297	bifunctional 5,10-methylene-tetrahydrofolate dehyd	95.26
TIGR02415	254	23BDH acetoin reductases. One member of this famil	95.24
PRK06407	301	ornithine cyclodeaminase; Provisional	95.24
PRK08644	212	thiamine biosynthesis protein ThiF; Provisional	95.21
PRK14106	450	murD UDP-N-acetylmuramoyl-L-alanyl-D-glutamate syn	95.21
PRK04148	134	hypothetical protein; Provisional	95.21
PRK00141	473	murD UDP-N-acetylmuramoyl-L-alanyl-D-glutamate syn	95.21
KOG1502	327	consensus Flavonol reductase/cinnamoyl-CoA reducta	95.2
PRK08220	252	2,3-dihydroxybenzoate-2,3-dehydrogenase; Validated	95.2
PRK05855	582	short chain dehydrogenase; Validated	95.2
PRK14168	297	bifunctional 5,10-methylene-tetrahydrofolate dehyd	95.19
PRK08642	253	fabG 3-ketoacyl-(acyl-carrier-protein) reductase;	95.19
PLN02650	351	dihydroflavonol-4-reductase	95.18
PRK04207	341	glyceraldehyde-3-phosphate dehydrogenase; Provisio	95.17
PLN02214	342	cinnamoyl-CoA reductase	95.17
PRK08226	263	short chain dehydrogenase; Provisional	95.17
PLN03075	296	nicotianamine synthase; Provisional	95.16
PLN02686	367	cinnamoyl-CoA reductase	95.16
PRK07792	306	fabG 3-ketoacyl-(acyl-carrier-protein) reductase;	95.15
KOG1208	314	consensus Dehydrogenases with different specificit	95.14
COG2227	243	UbiG 2-polyprenyl-3-methyl-5-hydroxy-6-metoxy-1,4-	95.13
PRK12743	256	oxidoreductase; Provisional	95.12
PLN02695	370	GDP-D-mannose-3',5'-epimerase	95.12
PRK15116	268	sulfur acceptor protein CsdL; Provisional	95.11
PRK08993	253	2-deoxy-D-gluconate 3-dehydrogenase; Validated	95.11
PRK09134	258	short chain dehydrogenase; Provisional	95.1
PRK08762	376	molybdopterin biosynthesis protein MoeB; Validated	95.09
PRK07577	234	short chain dehydrogenase; Provisional	95.09
PLN02256	304	arogenate dehydrogenase	95.09
PRK05599	246	hypothetical protein; Provisional	95.08
KOG1200	256	consensus Mitochondrial/plastidial beta-ketoacyl-A	95.08
PLN02662	322	cinnamyl-alcohol dehydrogenase family protein	95.07
PRK08317	241	hypothetical protein; Provisional	95.07
PRK06436	303	glycerate dehydrogenase; Provisional	95.07
PRK07402	196	precorrin-6B methylase; Provisional	95.06
TIGR02355	240	moeB molybdopterin synthase sulfurylase MoeB. This	95.05
PRK05479	330	ketol-acid reductoisomerase; Provisional	95.04
TIGR01829	242	AcAcCoA_reduct acetoacetyl-CoA reductase. (R)-3-hy	95.03
COG1179	263	Dinucleotide-utilizing enzymes involved in molybdo	95.01
PRK13403	335	ketol-acid reductoisomerase; Provisional	94.96
PRK08936	261	glucose-1-dehydrogenase; Provisional	94.95
PRK14031	444	glutamate dehydrogenase; Provisional	94.95
COG2084	286	MmsB 3-hydroxyisobutyrate dehydrogenase and relate	94.94

>COG1064 AdhP Zn-dependent alcohol dehydrogenases [General function prediction only]

Probab=100.00  E-value=5e-69  Score=481.87  Aligned_cols=333  Identities=44%  Similarity=0.728  Sum_probs=310.3

Q ss_pred             ccceeeeeecCCCCCccceeeccCCCCCCeEEEEEeeeccCcchHHhHhcCCCCCCCCCcccccccEEEEEeCCCCCCCC
Q 018067           10 PKNAFGWAAKDTSGVLSPFHFSRRATGEKDVTFKVTHCGICHSDLHMIKNEWGNTIYPIVPGHEIVGVVTEVGSKVSKFK   89 (361)
Q Consensus        10 ~~~~~~~~~~~~~~~l~~~~~~~p~~~~~evlV~v~~~~i~~~D~~~~~g~~~~~~~p~~lG~e~~G~Vv~vG~~v~~~~   89 (361)
                      +|++.++...++|  +++++++.|+|+++||+|+|+++|+|++|+|.++|.++...+|++||||.+|+|+++|++|++|+
T Consensus         3 ~mkA~~~~~~~~p--l~i~e~~~p~p~~~eVlI~v~~~GVChsDlH~~~G~~~~~~~P~ipGHEivG~V~~vG~~V~~~k   80 (339)
T COG1064           3 TMKAAVLKKFGQP--LEIEEVPVPEPGPGEVLIKVEACGVCHTDLHVAKGDWPVPKLPLIPGHEIVGTVVEVGEGVTGLK   80 (339)
T ss_pred             ceEEEEEccCCCC--ceEEeccCCCCCCCeEEEEEEEEeecchhhhhhcCCCCCCCCCccCCcceEEEEEEecCCCccCC
Confidence            7888888776666  88899999999999999999999999999999999999989999999999999999999999999


Q ss_pred             CCCEEEeccccCCCCCCcccccCCCCCCcchhcccccccCCCCcCCCcceeEEeecCCceEECCCCCCcccccccchhhh
Q 018067           90 VGDKVGVGCMVGSCRSCDSCAIDLENYCPKVIMTYANKYHDGTITYGGYSDIMVADEHFVVRIPEGTPLDATAPLLCAGI  169 (361)
Q Consensus        90 ~GdrV~~~~~~~~c~~c~~c~~~~~~~c~~~~~~~~~~~~~~~~~~g~~a~~v~v~~~~~~~ip~~~~~~~aa~l~~~~~  169 (361)
                      +||||.+.++..+|++|.||++|.+|+|++...+       |+..+|+|+||+++++.+++++|+++++++||.+.|++.
T Consensus        81 ~GDrVgV~~~~~~Cg~C~~C~~G~E~~C~~~~~~-------gy~~~GGyaeyv~v~~~~~~~iP~~~d~~~aApllCaGi  153 (339)
T COG1064          81 VGDRVGVGWLVISCGECEYCRSGNENLCPNQKIT-------GYTTDGGYAEYVVVPARYVVKIPEGLDLAEAAPLLCAGI  153 (339)
T ss_pred             CCCEEEecCccCCCCCCccccCcccccCCCcccc-------ceeecCcceeEEEEchHHeEECCCCCChhhhhhhhcCee
Confidence            9999999788889999999999999999986444       667999999999999999999999999999999999999


Q ss_pred             hhhhHhhhcCCCCCCCEEEEEcCChHHHHHHHHHHHcCCeEEEEeCCchhHHHHHHHcCCCEEecCCCHHHHHHhcCCcc
Q 018067          170 TVYSPLRFYGLDKPGMHVGVVGLGGLGHVAVKFAKAMGVKVTVISTSPSKKSEAIERLGADSFLVSRDQDEMQAAMGTMD  249 (361)
Q Consensus       170 ta~~~l~~~~~~~~g~~vlV~Gag~vG~~a~~la~~~g~~vi~~~~~~~~~~~~~~~~g~~~vv~~~~~~~~~~~~~g~d  249 (361)
                      |.|++|++ ..++||++|+|+|.|++|.+++|+|+++|++|+++++++++++ +++++|++++++.++++......+.+|
T Consensus       154 T~y~alk~-~~~~pG~~V~I~G~GGlGh~avQ~Aka~ga~Via~~~~~~K~e-~a~~lGAd~~i~~~~~~~~~~~~~~~d  231 (339)
T COG1064         154 TTYRALKK-ANVKPGKWVAVVGAGGLGHMAVQYAKAMGAEVIAITRSEEKLE-LAKKLGADHVINSSDSDALEAVKEIAD  231 (339)
T ss_pred             eEeeehhh-cCCCCCCEEEEECCcHHHHHHHHHHHHcCCeEEEEeCChHHHH-HHHHhCCcEEEEcCCchhhHHhHhhCc
Confidence            99999998 5589999999999999999999999999999999999988864 448999999999887777777766799


Q ss_pred             EEEEcCCCcccHHHHHhccccCCEEEEecCCC-CC-cccChHHHHhCCcEEEecccCCHHHHHHHHHHHHcCCCceeE-E
Q 018067          250 GIIDTVSAVHPLMPLIGLLKSQGKLVLVGAPE-KP-LELPAFSLLMGRKIVGGSMIGGMKETQEMIDFAAKHNIRADI-E  326 (361)
Q Consensus       250 ~vid~~g~~~~~~~~~~~l~~~G~~v~~g~~~-~~-~~~~~~~~~~~~~~i~g~~~~~~~~~~~~~~ll~~~~~~~~~-~  326 (361)
                      +++|+++ +.++..+++.|+++|+++.+|.+. .. ..++.+.++.++++|.||..++..+++++++|..+|++++.+ +
T Consensus       232 ~ii~tv~-~~~~~~~l~~l~~~G~~v~vG~~~~~~~~~~~~~~li~~~~~i~GS~~g~~~d~~e~l~f~~~g~Ikp~i~e  310 (339)
T COG1064         232 AIIDTVG-PATLEPSLKALRRGGTLVLVGLPGGGPIPLLPAFLLILKEISIVGSLVGTRADLEEALDFAAEGKIKPEILE  310 (339)
T ss_pred             EEEECCC-hhhHHHHHHHHhcCCEEEEECCCCCcccCCCCHHHhhhcCeEEEEEecCCHHHHHHHHHHHHhCCceeeEEe
Confidence            9999999 777999999999999999999984 44 568888899999999999999999999999999999999999 7


Q ss_pred             EEecccHHHHHHHHHcCCCceEEEEEeC
Q 018067          327 VIPADYVNTALERLAKADVRYRFVIDVA  354 (361)
Q Consensus       327 ~~~l~~~~~a~~~~~~~~~~gkvvi~~~  354 (361)
                      .++++|+++||+.|.+++..||+||.+.
T Consensus       311 ~~~l~~in~A~~~m~~g~v~gR~Vi~~~  338 (339)
T COG1064         311 TIPLDEINEAYERMEKGKVRGRAVIDMS  338 (339)
T ss_pred             eECHHHHHHHHHHHHcCCeeeEEEecCC
Confidence            9999999999999999999999999875

>KOG0023 consensus Alcohol dehydrogenase, class V [Secondary metabolites biosynthesis, transport and catabolism]

Probab=100.00  E-value=2.2e-65  Score=443.11  Aligned_cols=351  Identities=58%  Similarity=0.983  Sum_probs=329.1

Q ss_pred             CCCcccceeeeeecCCCC--CccceeeccCCCCCCeEEEEEeeeccCcchHHhHhcCCCCCCCCCcccccccEEEEEeCC
Q 018067            6 EQEHPKNAFGWAAKDTSG--VLSPFHFSRRATGEKDVTFKVTHCGICHSDLHMIKNEWGNTIYPIVPGHEIVGVVTEVGS   83 (361)
Q Consensus         6 ~~~~~~~~~~~~~~~~~~--~l~~~~~~~p~~~~~evlV~v~~~~i~~~D~~~~~g~~~~~~~p~~lG~e~~G~Vv~vG~   83 (361)
                      ++..|.+++.|.+++..+  +++..++++|+++++||+|+|+++|||++|++.+.|.++...+|.++|||.+|+|+++|+
T Consensus         3 ~~~~p~k~~g~~~~~~~G~l~p~~~~~~~~~~g~~dv~vkI~~cGIChsDlH~~~gdwg~s~~PlV~GHEiaG~VvkvGs   82 (360)
T KOG0023|consen    3 SMSIPEKQFGWAARDPSGVLSPEVFSFPVREPGENDVLVKIEYCGVCHSDLHAWKGDWGLSKYPLVPGHEIAGVVVKVGS   82 (360)
T ss_pred             cccCchhhEEEEEECCCCCCCcceeEcCCCCCCCCcEEEEEEEEeccchhHHHhhccCCcccCCccCCceeeEEEEEECC
Confidence            456778888887766656  566689999999999999999999999999999999999999999999999999999999


Q ss_pred             CCCCCCCCCEEEeccccCCCCCCcccccCCCCCCcchhcccccccCCCCcCCCcceeEEeecCCceEECCCCCCcccccc
Q 018067           84 KVSKFKVGDKVGVGCMVGSCRSCDSCAIDLENYCPKVIMTYANKYHDGTITYGGYSDIMVADEHFVVRIPEGTPLDATAP  163 (361)
Q Consensus        84 ~v~~~~~GdrV~~~~~~~~c~~c~~c~~~~~~~c~~~~~~~~~~~~~~~~~~g~~a~~v~v~~~~~~~ip~~~~~~~aa~  163 (361)
                      +|++|++||||-|-+.+.+|+.|.+|.++.+++|++.-+++.+..++|..+.|+|++|+++++.++++||++++++.||.
T Consensus        83 ~V~~~kiGD~vGVg~~~~sC~~CE~C~~~~E~yCpk~~~t~~g~~~DGt~~~ggf~~~~~v~~~~a~kIP~~~pl~~aAP  162 (360)
T KOG0023|consen   83 NVTGFKIGDRVGVGWLNGSCLSCEYCKSGNENYCPKMHFTYNGVYHDGTITQGGFQEYAVVDEVFAIKIPENLPLASAAP  162 (360)
T ss_pred             CcccccccCeeeeeEEeccccCccccccCCcccCCceeEeccccccCCCCccCccceeEEEeeeeEEECCCCCChhhccc
Confidence            99999999999999999999999999999999999999999999999999999999999999999999999999999999


Q ss_pred             cchhhhhhhhHhhhcCCCCCCCEEEEEcCChHHHHHHHHHHHcCCeEEEEeCCchhHHHHHHHcCCCEEecCC-CHHHHH
Q 018067          164 LLCAGITVYSPLRFYGLDKPGMHVGVVGLGGLGHVAVKFAKAMGVKVTVISTSPSKKSEAIERLGADSFLVSR-DQDEMQ  242 (361)
Q Consensus       164 l~~~~~ta~~~l~~~~~~~~g~~vlV~Gag~vG~~a~~la~~~g~~vi~~~~~~~~~~~~~~~~g~~~vv~~~-~~~~~~  242 (361)
                      +.|++.|+|.+|.+.+ +.||+++-|.|+|++|.+++|+||+||.+|+++++++.+++++.+.+|++..++.. ++++++
T Consensus       163 lLCaGITvYspLk~~g-~~pG~~vgI~GlGGLGh~aVq~AKAMG~rV~vis~~~~kkeea~~~LGAd~fv~~~~d~d~~~  241 (360)
T KOG0023|consen  163 LLCAGITVYSPLKRSG-LGPGKWVGIVGLGGLGHMAVQYAKAMGMRVTVISTSSKKKEEAIKSLGADVFVDSTEDPDIMK  241 (360)
T ss_pred             hhhcceEEeehhHHcC-CCCCcEEEEecCcccchHHHHHHHHhCcEEEEEeCCchhHHHHHHhcCcceeEEecCCHHHHH
Confidence            9999999999999877 68999999999977999999999999999999999998889999999999988887 788888


Q ss_pred             HhcCCccEEEEcCC--CcccHHHHHhccccCCEEEEecCCCCCcccChHHHHhCCcEEEecccCCHHHHHHHHHHHHcCC
Q 018067          243 AAMGTMDGIIDTVS--AVHPLMPLIGLLKSQGKLVLVGAPEKPLELPAFSLLMGRKIVGGSMIGGMKETQEMIDFAAKHN  320 (361)
Q Consensus       243 ~~~~g~d~vid~~g--~~~~~~~~~~~l~~~G~~v~~g~~~~~~~~~~~~~~~~~~~i~g~~~~~~~~~~~~~~ll~~~~  320 (361)
                      ++.+-.|..+|++.  ..+.+..++.+++++|++|++|.+..++.++.+.++.++++|.||..++..+.++++++..++.
T Consensus       242 ~~~~~~dg~~~~v~~~a~~~~~~~~~~lk~~Gt~V~vg~p~~~~~~~~~~lil~~~~I~GS~vG~~ket~E~Ldf~a~~~  321 (360)
T KOG0023|consen  242 AIMKTTDGGIDTVSNLAEHALEPLLGLLKVNGTLVLVGLPEKPLKLDTFPLILGRKSIKGSIVGSRKETQEALDFVARGL  321 (360)
T ss_pred             HHHHhhcCcceeeeeccccchHHHHHHhhcCCEEEEEeCcCCcccccchhhhcccEEEEeeccccHHHHHHHHHHHHcCC
Confidence            88776666666666  6777999999999999999999998899999999999999999999999999999999999999


Q ss_pred             CceeEEEEecccHHHHHHHHHcCCCceEEEEEeCCcc
Q 018067          321 IRADIEVIPADYVNTALERLAKADVRYRFVIDVANTM  357 (361)
Q Consensus       321 ~~~~~~~~~l~~~~~a~~~~~~~~~~gkvvi~~~~~~  357 (361)
                      ++.+++..+++++++||++|.+++.++|.|+++..+.
T Consensus       322 ik~~IE~v~~~~v~~a~erm~kgdV~yRfVvD~s~~~  358 (360)
T KOG0023|consen  322 IKSPIELVKLSEVNEAYERMEKGDVRYRFVVDVSKSL  358 (360)
T ss_pred             CcCceEEEehhHHHHHHHHHHhcCeeEEEEEEccccc
Confidence            9999999999999999999999999999999998764

>PLN02586 probable cinnamyl alcohol dehydrogenase

Probab=100.00  E-value=4.7e-59  Score=436.77  Aligned_cols=356  Identities=71%  Similarity=1.205  Sum_probs=314.4

Q ss_pred             CCCCCCCCcccceeeeeecCCCCCccceeeccCCCCCCeEEEEEeeeccCcchHHhHhcCCCCCCCCCcccccccEEEEE
Q 018067            1 MGQAPEQEHPKNAFGWAAKDTSGVLSPFHFSRRATGEKDVTFKVTHCGICHSDLHMIKNEWGNTIYPIVPGHEIVGVVTE   80 (361)
Q Consensus         1 m~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~p~~~~~evlV~v~~~~i~~~D~~~~~g~~~~~~~p~~lG~e~~G~Vv~   80 (361)
                      |+.+|+...|||+++|...+.++.++..+++.|.++++||+|||.++|||++|++.+.|.++...+|.++|||++|+|++
T Consensus         1 ~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~p~~~~~eVlV~v~~~gic~sD~~~~~g~~~~~~~p~i~GhE~~G~V~~   80 (360)
T PLN02586          1 MAKSPEEEHPQKAFGWAARDPSGVLSPFHFSRRENGDEDVTVKILYCGVCHSDLHTIKNEWGFTRYPIVPGHEIVGIVTK   80 (360)
T ss_pred             CCCChhhhchhheeEEEecCCCCCceEEeecCCCCCCCeEEEEEEEecCChhhHhhhcCCcCCCCCCccCCcceeEEEEE
Confidence            78899999999999999988888899999999999999999999999999999999888665446789999999999999


Q ss_pred             eCCCCCCCCCCCEEEeccccCCCCCCcccccCCCCCCcchhcccccccCCCCcCCCcceeEEeecCCceEECCCCCCccc
Q 018067           81 VGSKVSKFKVGDKVGVGCMVGSCRSCDSCAIDLENYCPKVIMTYANKYHDGTITYGGYSDIMVADEHFVVRIPEGTPLDA  160 (361)
Q Consensus        81 vG~~v~~~~~GdrV~~~~~~~~c~~c~~c~~~~~~~c~~~~~~~~~~~~~~~~~~g~~a~~v~v~~~~~~~ip~~~~~~~  160 (361)
                      +|+++++|++||||++.+...+|++|.+|++|.++.|++..+.+......|...+|+|+||+.++.+.++++|+++++++
T Consensus        81 vG~~v~~~~vGdrV~~~~~~~~Cg~C~~C~~g~~~~C~~~~~~~~~~~~~g~~~~G~~aey~~v~~~~~~~lP~~ls~~~  160 (360)
T PLN02586         81 LGKNVKKFKEGDRVGVGVIVGSCKSCESCDQDLENYCPKMIFTYNSIGHDGTKNYGGYSDMIVVDQHFVLRFPDNLPLDA  160 (360)
T ss_pred             ECCCCCccCCCCEEEEccccCcCCCCccccCCCcccCCCccccccccccCCCcCCCccceEEEEchHHeeeCCCCCCHHH
Confidence            99999999999999877766789999999999999999864332111112334579999999999999999999999999


Q ss_pred             ccccchhhhhhhhHhhhcCCCCCCCEEEEEcCChHHHHHHHHHHHcCCeEEEEeCCchhHHHHHHHcCCCEEecCCCHHH
Q 018067          161 TAPLLCAGITVYSPLRFYGLDKPGMHVGVVGLGGLGHVAVKFAKAMGVKVTVISTSPSKKSEAIERLGADSFLVSRDQDE  240 (361)
Q Consensus       161 aa~l~~~~~ta~~~l~~~~~~~~g~~vlV~Gag~vG~~a~~la~~~g~~vi~~~~~~~~~~~~~~~~g~~~vv~~~~~~~  240 (361)
                      |+.+++.+.|+|+++.+...+++|++|||.|+|++|++++|+|+.+|++|++++.+++++.++++++|++.++++.+.+.
T Consensus       161 aa~l~~~~~ta~~al~~~~~~~~g~~VlV~G~G~vG~~avq~Ak~~Ga~vi~~~~~~~~~~~~~~~~Ga~~vi~~~~~~~  240 (360)
T PLN02586        161 GAPLLCAGITVYSPMKYYGMTEPGKHLGVAGLGGLGHVAVKIGKAFGLKVTVISSSSNKEDEAINRLGADSFLVSTDPEK  240 (360)
T ss_pred             hhhhhcchHHHHHHHHHhcccCCCCEEEEECCCHHHHHHHHHHHHCCCEEEEEeCCcchhhhHHHhCCCcEEEcCCCHHH
Confidence            99999999999999987776789999999999999999999999999999988888877777778999999988777666


Q ss_pred             HHHhcCCccEEEEcCCCcccHHHHHhccccCCEEEEecCCCCCcccChHHHHhCCcEEEecccCCHHHHHHHHHHHHcCC
Q 018067          241 MQAAMGTMDGIIDTVSAVHPLMPLIGLLKSQGKLVLVGAPEKPLELPAFSLLMGRKIVGGSMIGGMKETQEMIDFAAKHN  320 (361)
Q Consensus       241 ~~~~~~g~d~vid~~g~~~~~~~~~~~l~~~G~~v~~g~~~~~~~~~~~~~~~~~~~i~g~~~~~~~~~~~~~~ll~~~~  320 (361)
                      +.+..+++|++||++|...++..++++++++|+++.+|.......++...++.+++.+.|+..++.++++++++++.+|+
T Consensus       241 ~~~~~~~~D~vid~~g~~~~~~~~~~~l~~~G~iv~vG~~~~~~~~~~~~~~~~~~~i~g~~~~~~~~~~~~~~li~~g~  320 (360)
T PLN02586        241 MKAAIGTMDYIIDTVSAVHALGPLLGLLKVNGKLITLGLPEKPLELPIFPLVLGRKLVGGSDIGGIKETQEMLDFCAKHN  320 (360)
T ss_pred             HHhhcCCCCEEEECCCCHHHHHHHHHHhcCCcEEEEeCCCCCCCccCHHHHHhCCeEEEEcCcCCHHHHHHHHHHHHhCC
Confidence            66666689999999998766889999999999999999765556777777788899999998888889999999999999


Q ss_pred             CceeEEEEecccHHHHHHHHHcCCCceEEEEEeCCc
Q 018067          321 IRADIEVIPADYVNTALERLAKADVRYRFVIDVANT  356 (361)
Q Consensus       321 ~~~~~~~~~l~~~~~a~~~~~~~~~~gkvvi~~~~~  356 (361)
                      +++.+++|+|+|+++||+.+.+++..||+|+.+...
T Consensus       321 i~~~~~~~~l~~~~~A~~~~~~~~~~gkvvi~~~~~  356 (360)
T PLN02586        321 ITADIELIRMDEINTAMERLAKSDVRYRFVIDVANS  356 (360)
T ss_pred             CCCcEEEEeHHHHHHHHHHHHcCCCcEEEEEEcccc
Confidence            998778999999999999999999889999998443

>KOG0024 consensus Sorbitol dehydrogenase [Secondary metabolites biosynthesis, transport and catabolism]

Probab=100.00  E-value=1.5e-58  Score=401.66  Aligned_cols=334  Identities=24%  Similarity=0.334  Sum_probs=289.9

Q ss_pred             cccceeeeeecCCCCCccceeeccCCC-CCCeEEEEEeeeccCcchHHhHhcCCCCC---CCCCcccccccEEEEEeCCC
Q 018067            9 HPKNAFGWAAKDTSGVLSPFHFSRRAT-GEKDVTFKVTHCGICHSDLHMIKNEWGNT---IYPIVPGHEIVGVVTEVGSK   84 (361)
Q Consensus         9 ~~~~~~~~~~~~~~~~l~~~~~~~p~~-~~~evlV~v~~~~i~~~D~~~~~g~~~~~---~~p~~lG~e~~G~Vv~vG~~   84 (361)
                      ..|++++|   .++++++++++|.|++ .|+||+|++.++|||+||+|.+.......   ..|.++|||.+|+|.++|+.
T Consensus         3 ~~~~A~vl---~g~~di~i~~~p~p~i~~p~eVlv~i~a~GICGSDvHy~~~G~ig~~v~k~PmvlGHEssGiV~evG~~   79 (354)
T KOG0024|consen    3 ADNLALVL---RGKGDIRIEQRPIPTITDPDEVLVAIKAVGICGSDVHYYTHGRIGDFVVKKPMVLGHESSGIVEEVGDE   79 (354)
T ss_pred             cccceeEE---EccCceeEeeCCCCCCCCCCEEEEEeeeEEecCccchhhccCCcCccccccccccccccccchhhhccc
Confidence            36777776   4677799999999987 99999999999999999999987654432   57999999999999999999


Q ss_pred             CCCCCCCCEEEeccccCCCCCCcccccCCCCCCcchhcccccccCCCCcCCCcceeEEeecCCceEECCCCCCccccccc
Q 018067           85 VSKFKVGDKVGVGCMVGSCRSCDSCAIDLENYCPKVIMTYANKYHDGTITYGGYSDIMVADEHFVVRIPEGTPLDATAPL  164 (361)
Q Consensus        85 v~~~~~GdrV~~~~~~~~c~~c~~c~~~~~~~c~~~~~~~~~~~~~~~~~~g~~a~~v~v~~~~~~~ip~~~~~~~aa~l  164 (361)
                      |+++++||||++.|.. +|+.|+.|++|++|.|+.+.|...+      ..+|++++|+++++++++++|+++|++++|.+
T Consensus        80 Vk~LkVGDrVaiEpg~-~c~~cd~CK~GrYNlCp~m~f~atp------p~~G~la~y~~~~~dfc~KLPd~vs~eeGAl~  152 (354)
T KOG0024|consen   80 VKHLKVGDRVAIEPGL-PCRDCDFCKEGRYNLCPHMVFCATP------PVDGTLAEYYVHPADFCYKLPDNVSFEEGALI  152 (354)
T ss_pred             ccccccCCeEEecCCC-ccccchhhhCcccccCCccccccCC------CcCCceEEEEEechHheeeCCCCCchhhcccc
Confidence            9999999999998887 9999999999999999998776444      46799999999999999999999999998755


Q ss_pred             chhhhhhhhHhhhcCCCCCCCEEEEEcCChHHHHHHHHHHHcCC-eEEEEeCCchhHHHHHHHcCCCEEecCCCH---HH
Q 018067          165 LCAGITVYSPLRFYGLDKPGMHVGVVGLGGLGHVAVKFAKAMGV-KVTVISTSPSKKSEAIERLGADSFLVSRDQ---DE  240 (361)
Q Consensus       165 ~~~~~ta~~~l~~~~~~~~g~~vlV~Gag~vG~~a~~la~~~g~-~vi~~~~~~~~~~~~~~~~g~~~vv~~~~~---~~  240 (361)
                       .++..+|++.++. .+++|++|||+|+|+||+.+...||++|+ +|++++- .+.|.+++++||++.+.+....   +.
T Consensus       153 -ePLsV~~HAcr~~-~vk~Gs~vLV~GAGPIGl~t~l~Aka~GA~~VVi~d~-~~~Rle~Ak~~Ga~~~~~~~~~~~~~~  229 (354)
T KOG0024|consen  153 -EPLSVGVHACRRA-GVKKGSKVLVLGAGPIGLLTGLVAKAMGASDVVITDL-VANRLELAKKFGATVTDPSSHKSSPQE  229 (354)
T ss_pred             -cchhhhhhhhhhc-CcccCCeEEEECCcHHHHHHHHHHHHcCCCcEEEeec-CHHHHHHHHHhCCeEEeeccccccHHH
Confidence             4689999999865 48999999999999999999999999999 5555544 4555677788999988776552   22


Q ss_pred             HHHh----cC--CccEEEEcCCCcccHHHHHhccccCCEEEEecCCCCCcccChHHHHhCCcEEEecccCCHHHHHHHHH
Q 018067          241 MQAA----MG--TMDGIIDTVSAVHPLMPLIGLLKSQGKLVLVGAPEKPLELPAFSLLMGRKIVGGSMIGGMKETQEMID  314 (361)
Q Consensus       241 ~~~~----~~--g~d~vid~~g~~~~~~~~~~~l~~~G~~v~~g~~~~~~~~~~~~~~~~~~~i~g~~~~~~~~~~~~~~  314 (361)
                      +.+.    .+  .+|++|||+|...+++.++..++.+|+++.+|+......|+......+++.+.|++.+...++..+++
T Consensus       230 ~~~~v~~~~g~~~~d~~~dCsG~~~~~~aai~a~r~gGt~vlvg~g~~~~~fpi~~v~~kE~~~~g~fry~~~~y~~ai~  309 (354)
T KOG0024|consen  230 LAELVEKALGKKQPDVTFDCSGAEVTIRAAIKATRSGGTVVLVGMGAEEIQFPIIDVALKEVDLRGSFRYCNGDYPTAIE  309 (354)
T ss_pred             HHHHHHhhccccCCCeEEEccCchHHHHHHHHHhccCCEEEEeccCCCccccChhhhhhheeeeeeeeeeccccHHHHHH
Confidence            2222    12  39999999999999999999999999999999988889999999999999999999999999999999


Q ss_pred             HHHcCCCcee--E-EEEecccHHHHHHHHHcCCCc-eEEEEEeCC
Q 018067          315 FAAKHNIRAD--I-EVIPADYVNTALERLAKADVR-YRFVIDVAN  355 (361)
Q Consensus       315 ll~~~~~~~~--~-~~~~l~~~~~a~~~~~~~~~~-gkvvi~~~~  355 (361)
                      ++.+|+++..  + +.|+++++.+||+.++++... -|++|..++
T Consensus       310 li~sGki~~k~lIT~r~~~~~~~eAf~~~~~~~~~~iKv~i~~~~  354 (354)
T KOG0024|consen  310 LVSSGKIDVKPLITHRYKFDDADEAFETLQHGEEGVIKVIITGPE  354 (354)
T ss_pred             HHHcCCcCchhheecccccchHHHHHHHHHhCcCCceEEEEeCCC
Confidence            9999998754  4 899999999999999988853 588887653

>PLN02178 cinnamyl-alcohol dehydrogenase

Probab=100.00  E-value=4.8e-56  Score=417.81  Aligned_cols=347  Identities=65%  Similarity=1.137  Sum_probs=302.0

Q ss_pred             ccceeeeeecCCCCCccceeeccCCCCCCeEEEEEeeeccCcchHHhHhcCCCCCCCCCcccccccEEEEEeCCCCCCCC
Q 018067           10 PKNAFGWAAKDTSGVLSPFHFSRRATGEKDVTFKVTHCGICHSDLHMIKNEWGNTIYPIVPGHEIVGVVTEVGSKVSKFK   89 (361)
Q Consensus        10 ~~~~~~~~~~~~~~~l~~~~~~~p~~~~~evlV~v~~~~i~~~D~~~~~g~~~~~~~p~~lG~e~~G~Vv~vG~~v~~~~   89 (361)
                      ..++.++...+.++.++..+++.|+|+++||+|||.++|||++|++.+.|.++...+|.++|||++|+|+++|+++++|+
T Consensus         4 ~~~a~~~~~~~~~~~l~~~~~~~p~~~~~eVlVkV~a~gic~sD~~~~~G~~~~~~~p~i~GhE~aG~Vv~vG~~v~~~~   83 (375)
T PLN02178          4 QNKAFGWAANDESGVLSPFHFSRRENGENDVTVKILFCGVCHSDLHTIKNHWGFSRYPIIPGHEIVGIATKVGKNVTKFK   83 (375)
T ss_pred             cceeEEEEEccCCCCceEEeecCCCCCCCeEEEEEEEEcCchHHHHHhcCCCCCCCCCcccCceeeEEEEEECCCCCccC
Confidence            56778888888888898899999999999999999999999999999988664445689999999999999999999999


Q ss_pred             CCCEEEeccccCCCCCCcccccCCCCCCcchhcccccccCCCCcCCCcceeEEeecCCceEECCCCCCcccccccchhhh
Q 018067           90 VGDKVGVGCMVGSCRSCDSCAIDLENYCPKVIMTYANKYHDGTITYGGYSDIMVADEHFVVRIPEGTPLDATAPLLCAGI  169 (361)
Q Consensus        90 ~GdrV~~~~~~~~c~~c~~c~~~~~~~c~~~~~~~~~~~~~~~~~~g~~a~~v~v~~~~~~~ip~~~~~~~aa~l~~~~~  169 (361)
                      +||||++.+...+|++|.+|++|+++.|++..+.+......|....|+|+||+.++++.++++|+++++++|+.+++...
T Consensus        84 vGdrV~~~~~~~~cg~C~~C~~g~~~~C~~~~~~~~~~~~~g~~~~G~~aey~~v~~~~~~~lP~~ls~~~aa~l~~~~~  163 (375)
T PLN02178         84 EGDRVGVGVIIGSCQSCESCNQDLENYCPKVVFTYNSRSSDGTRNQGGYSDVIVVDHRFVLSIPDGLPSDSGAPLLCAGI  163 (375)
T ss_pred             CCCEEEEcCccCCCCCChhHhCcchhcCCCccccccccccCCCcCCCccccEEEEchHHeEECCCCCCHHHcchhhccch
Confidence            99999877766679999999999999999865422111111233479999999999999999999999999999999999


Q ss_pred             hhhhHhhhcCC-CCCCCEEEEEcCChHHHHHHHHHHHcCCeEEEEeCCchhHHHHHHHcCCCEEecCCCHHHHHHhcCCc
Q 018067          170 TVYSPLRFYGL-DKPGMHVGVVGLGGLGHVAVKFAKAMGVKVTVISTSPSKKSEAIERLGADSFLVSRDQDEMQAAMGTM  248 (361)
Q Consensus       170 ta~~~l~~~~~-~~~g~~vlV~Gag~vG~~a~~la~~~g~~vi~~~~~~~~~~~~~~~~g~~~vv~~~~~~~~~~~~~g~  248 (361)
                      |+|+++..... .++|++|+|.|+|++|++++|+|+.+|++|++++++++++.++++++|+++++++.+.+.+.+..+++
T Consensus       164 ta~~al~~~~~~~~~g~~VlV~G~G~vG~~avq~Ak~~Ga~Vi~~~~~~~~~~~~a~~lGa~~~i~~~~~~~v~~~~~~~  243 (375)
T PLN02178        164 TVYSPMKYYGMTKESGKRLGVNGLGGLGHIAVKIGKAFGLRVTVISRSSEKEREAIDRLGADSFLVTTDSQKMKEAVGTM  243 (375)
T ss_pred             HHHHHHHHhCCCCCCCCEEEEEcccHHHHHHHHHHHHcCCeEEEEeCChHHhHHHHHhCCCcEEEcCcCHHHHHHhhCCC
Confidence            99999876553 36899999999999999999999999999999988877766777899999998877655555555689


Q ss_pred             cEEEEcCCCcccHHHHHhccccCCEEEEecCCCCCcccChHHHHhCCcEEEecccCCHHHHHHHHHHHHcCCCceeEEEE
Q 018067          249 DGIIDTVSAVHPLMPLIGLLKSQGKLVLVGAPEKPLELPAFSLLMGRKIVGGSMIGGMKETQEMIDFAAKHNIRADIEVI  328 (361)
Q Consensus       249 d~vid~~g~~~~~~~~~~~l~~~G~~v~~g~~~~~~~~~~~~~~~~~~~i~g~~~~~~~~~~~~~~ll~~~~~~~~~~~~  328 (361)
                      |++||++|...++..++++++++|+++.+|.......++...++.+++++.|+..++.++++++++++.+|++++.+++|
T Consensus       244 D~vid~~G~~~~~~~~~~~l~~~G~iv~vG~~~~~~~~~~~~~~~~~~~i~g~~~~~~~~~~~~~~l~~~g~i~~~i~~~  323 (375)
T PLN02178        244 DFIIDTVSAEHALLPLFSLLKVSGKLVALGLPEKPLDLPIFPLVLGRKMVGGSQIGGMKETQEMLEFCAKHKIVSDIELI  323 (375)
T ss_pred             cEEEECCCcHHHHHHHHHhhcCCCEEEEEccCCCCCccCHHHHHhCCeEEEEeCccCHHHHHHHHHHHHhCCCcccEEEE
Confidence            99999999886689999999999999999986655677778888899999999988888999999999999999888889


Q ss_pred             ecccHHHHHHHHHcCCCceEEEEEeCCc
Q 018067          329 PADYVNTALERLAKADVRYRFVIDVANT  356 (361)
Q Consensus       329 ~l~~~~~a~~~~~~~~~~gkvvi~~~~~  356 (361)
                      ||+++++||+.+.+++..||+++.+.+.
T Consensus       324 ~l~~~~~A~~~~~~~~~~gkvvi~~~~~  351 (375)
T PLN02178        324 KMSDINSAMDRLAKSDVRYRFVIDVANS  351 (375)
T ss_pred             eHHHHHHHHHHHHcCCCceEEEEEeccc
Confidence            9999999999999999889999998543

>COG1062 AdhC Zn-dependent alcohol dehydrogenases, class III [Energy production and conversion]

Probab=100.00  E-value=8.5e-57  Score=394.22  Aligned_cols=331  Identities=25%  Similarity=0.428  Sum_probs=286.7

Q ss_pred             eecCCCCCccceeeccCCCCCCeEEEEEeeeccCcchHHhHhcCCCCCCCCCcccccccEEEEEeCCCCCCCCCCCEEEe
Q 018067           17 AAKDTSGVLSPFHFSRRATGEKDVTFKVTHCGICHSDLHMIKNEWGNTIYPIVPGHEIVGVVTEVGSKVSKFKVGDKVGV   96 (361)
Q Consensus        17 ~~~~~~~~l~~~~~~~p~~~~~evlV~v~~~~i~~~D~~~~~g~~~~~~~p~~lG~e~~G~Vv~vG~~v~~~~~GdrV~~   96 (361)
                      ..+...+.|+++++++++|+++|||||+.++|+|++|.+.++|..+.. +|.+||||++|+|++||++|+.+++||+| +
T Consensus         7 V~~~~~~Pl~i~ei~l~~P~~gEVlVri~AtGVCHTD~~~~~G~~p~~-~P~vLGHEgAGiVe~VG~gVt~vkpGDhV-I   84 (366)
T COG1062           7 VAREAGKPLEIEEVDLDPPRAGEVLVRITATGVCHTDAHTLSGDDPEG-FPAVLGHEGAGIVEAVGEGVTSVKPGDHV-I   84 (366)
T ss_pred             eeecCCCCeEEEEEecCCCCCCeEEEEEEEeeccccchhhhcCCCCCC-CceecccccccEEEEecCCccccCCCCEE-E
Confidence            333455669999999999999999999999999999999999999876 99999999999999999999999999999 5


Q ss_pred             ccccCCCCCCcccccCCCCCCcchhcccc-cccCCC-------------CcCCCcceeEEeecCCceEECCCCCCccccc
Q 018067           97 GCMVGSCRSCDSCAIDLENYCPKVIMTYA-NKYHDG-------------TITYGGYSDIMVADEHFVVRIPEGTPLDATA  162 (361)
Q Consensus        97 ~~~~~~c~~c~~c~~~~~~~c~~~~~~~~-~~~~~~-------------~~~~g~~a~~v~v~~~~~~~ip~~~~~~~aa  162 (361)
                      ..+.+.||+|.+|.+|++|+|...+.+.. +-..+|             +.-.++|++|..++...+++++++.+++.++
T Consensus        85 ~~f~p~CG~C~~C~sGk~nlC~~~~~~~~kG~m~dGttrls~~~~~~~h~lG~stFa~y~vv~~~s~vki~~~~p~~~a~  164 (366)
T COG1062          85 LLFTPECGQCKFCLSGKPNLCEAIRATQGKGTMPDGTTRLSGNGVPVYHYLGCSTFAEYTVVHEISLVKIDPDAPLEKAC  164 (366)
T ss_pred             EcccCCCCCCchhhCCCcccccchhhhcccccccCCceeeecCCcceeeeeccccchhheeecccceEECCCCCCccceE
Confidence            67788999999999999999997532221 111111             1223599999999999999999999999999


Q ss_pred             ccchhhhhhhhHhhhcCCCCCCCEEEEEcCChHHHHHHHHHHHcCC-eEEEEeCCchhHHHHHHHcCCCEEecCCCH---
Q 018067          163 PLLCAGITVYSPLRFYGLDKPGMHVGVVGLGGLGHVAVKFAKAMGV-KVTVISTSPSKKSEAIERLGADSFLVSRDQ---  238 (361)
Q Consensus       163 ~l~~~~~ta~~~l~~~~~~~~g~~vlV~Gag~vG~~a~~la~~~g~-~vi~~~~~~~~~~~~~~~~g~~~vv~~~~~---  238 (361)
                      .+.|...|.+.++.+.+++++|++|.|+|.|++|++++|-|+..|+ ++|.++.+++++ +++++||+++++|.++.   
T Consensus       165 llGCgV~TG~Gav~nta~v~~G~tvaV~GlGgVGlaaI~gA~~agA~~IiAvD~~~~Kl-~~A~~fGAT~~vn~~~~~~v  243 (366)
T COG1062         165 LLGCGVTTGIGAVVNTAKVEPGDTVAVFGLGGVGLAAIQGAKAAGAGRIIAVDINPEKL-ELAKKFGATHFVNPKEVDDV  243 (366)
T ss_pred             EEeeeeccChHHhhhcccCCCCCeEEEEeccHhHHHHHHHHHHcCCceEEEEeCCHHHH-HHHHhcCCceeecchhhhhH
Confidence            9999999999999999999999999999999999999999999999 888888888776 55589999999999875   


Q ss_pred             -HHHHHhcC-CccEEEEcCCCcccHHHHHhccccCCEEEEecCCCC--CcccChHHHHhCCcEEEecccCC---HHHHHH
Q 018067          239 -DEMQAAMG-TMDGIIDTVSAVHPLMPLIGLLKSQGKLVLVGAPEK--PLELPAFSLLMGRKIVGGSMIGG---MKETQE  311 (361)
Q Consensus       239 -~~~~~~~~-g~d~vid~~g~~~~~~~~~~~l~~~G~~v~~g~~~~--~~~~~~~~~~~~~~~i~g~~~~~---~~~~~~  311 (361)
                       +.+.++++ |+|++|||+|+...++++++++.++|+.+.+|..+.  .+.++++.+... .++.|+..++   ..+++.
T Consensus       244 v~~i~~~T~gG~d~~~e~~G~~~~~~~al~~~~~~G~~v~iGv~~~~~~i~~~~~~lv~g-r~~~Gs~~G~~~p~~diP~  322 (366)
T COG1062         244 VEAIVELTDGGADYAFECVGNVEVMRQALEATHRGGTSVIIGVAGAGQEISTRPFQLVTG-RVWKGSAFGGARPRSDIPR  322 (366)
T ss_pred             HHHHHHhcCCCCCEEEEccCCHHHHHHHHHHHhcCCeEEEEecCCCCceeecChHHeecc-ceEEEEeecCCccccchhH
Confidence             34556666 899999999999989999999999999999998654  345677777666 8899988764   578999


Q ss_pred             HHHHHHcCCCceeE---EEEecccHHHHHHHHHcCCCceEEEEE
Q 018067          312 MIDFAAKHNIRADI---EVIPADYVNTALERLAKADVRYRFVID  352 (361)
Q Consensus       312 ~~~ll~~~~~~~~~---~~~~l~~~~~a~~~~~~~~~~gkvvi~  352 (361)
                      +++++.+|++....   |.++|+|++|||++|.+++.. |-||.
T Consensus       323 lv~~y~~Gkl~~d~lvt~~~~Le~INeaf~~m~~G~~I-R~Vi~  365 (366)
T COG1062         323 LVDLYMAGKLPLDRLVTHTIPLEDINEAFDLMHEGKSI-RSVIR  365 (366)
T ss_pred             HHHHHHcCCCchhHHhhccccHHHHHHHHHHHhCCcee-eEEec
Confidence            99999999988653   899999999999999999974 65654

>PLN02514 cinnamyl-alcohol dehydrogenase

Probab=100.00  E-value=7.7e-54  Score=401.43  Aligned_cols=347  Identities=56%  Similarity=0.976  Sum_probs=301.5

Q ss_pred             ccceeeeeecCCCCCccceeeccCCCCCCeEEEEEeeeccCcchHHhHhcCCCCCCCCCcccccccEEEEEeCCCCCCCC
Q 018067           10 PKNAFGWAAKDTSGVLSPFHFSRRATGEKDVTFKVTHCGICHSDLHMIKNEWGNTIYPIVPGHEIVGVVTEVGSKVSKFK   89 (361)
Q Consensus        10 ~~~~~~~~~~~~~~~l~~~~~~~p~~~~~evlV~v~~~~i~~~D~~~~~g~~~~~~~p~~lG~e~~G~Vv~vG~~v~~~~   89 (361)
                      .++++++........+++.+++.|.++++||+|||.+++||++|++.+.|.++...+|.++|||++|+|+++|+++++|+
T Consensus         7 ~~~~~~~~~~~~~~~~~~~~~~~p~~~~~eVlVrv~a~gi~~~D~~~~~g~~~~~~~p~i~G~E~~G~Vv~vG~~v~~~~   86 (357)
T PLN02514          7 EKKTTGWAARDPSGHLSPYTYTLRKTGPEDVVIKVIYCGICHTDLHQIKNDLGMSNYPMVPGHEVVGEVVEVGSDVSKFT   86 (357)
T ss_pred             CceEEEEEEecCCCCceEEeecCCCCCCCcEEEEEEEeccChHHHHhhcCCcCcCCCCccCCceeeEEEEEECCCccccc
Confidence            44455555554556688999999999999999999999999999999888665445788999999999999999999999


Q ss_pred             CCCEEEeccccCCCCCCcccccCCCCCCcchhcccccccCCCCcCCCcceeEEeecCCceEECCCCCCcccccccchhhh
Q 018067           90 VGDKVGVGCMVGSCRSCDSCAIDLENYCPKVIMTYANKYHDGTITYGGYSDIMVADEHFVVRIPEGTPLDATAPLLCAGI  169 (361)
Q Consensus        90 ~GdrV~~~~~~~~c~~c~~c~~~~~~~c~~~~~~~~~~~~~~~~~~g~~a~~v~v~~~~~~~ip~~~~~~~aa~l~~~~~  169 (361)
                      +||||++.+....|++|.+|.++.++.|.+..+.+...+..|....|+|+||+.++.+.++++|+++++++|+.+++.+.
T Consensus        87 ~Gd~V~~~~~~~~c~~C~~c~~g~~~~c~~~~~~~~~~~~~g~~~~G~~aey~~v~~~~~~~iP~~~~~~~aa~l~~~~~  166 (357)
T PLN02514         87 VGDIVGVGVIVGCCGECSPCKSDLEQYCNKRIWSYNDVYTDGKPTQGGFASAMVVDQKFVVKIPEGMAPEQAAPLLCAGV  166 (357)
T ss_pred             CCCEEEEcCccccCCCChhHhCCCcccCCCccccccccccCCccCCCccccEEEEchHHeEECCCCCCHHHhhhhhhhHH
Confidence            99999877777789999999999999999864332222222334579999999999999999999999999999999999


Q ss_pred             hhhhHhhhcCCCCCCCEEEEEcCChHHHHHHHHHHHcCCeEEEEeCCchhHHHHHHHcCCCEEecCCCHHHHHHhcCCcc
Q 018067          170 TVYSPLRFYGLDKPGMHVGVVGLGGLGHVAVKFAKAMGVKVTVISTSPSKKSEAIERLGADSFLVSRDQDEMQAAMGTMD  249 (361)
Q Consensus       170 ta~~~l~~~~~~~~g~~vlV~Gag~vG~~a~~la~~~g~~vi~~~~~~~~~~~~~~~~g~~~vv~~~~~~~~~~~~~g~d  249 (361)
                      |||+++......++|++|+|+|+|++|++++|+|+.+|+++++++++++++..+.+++|++.++++.+.+.+.+...++|
T Consensus       167 ta~~al~~~~~~~~g~~vlV~G~G~vG~~av~~Ak~~G~~vi~~~~~~~~~~~~~~~~Ga~~~i~~~~~~~~~~~~~~~D  246 (357)
T PLN02514        167 TVYSPLSHFGLKQSGLRGGILGLGGVGHMGVKIAKAMGHHVTVISSSDKKREEALEHLGADDYLVSSDAAEMQEAADSLD  246 (357)
T ss_pred             HHHHHHHHcccCCCCCeEEEEcccHHHHHHHHHHHHCCCeEEEEeCCHHHHHHHHHhcCCcEEecCCChHHHHHhcCCCc
Confidence            99999987776689999999999999999999999999999999888888777777899988877766555666666899


Q ss_pred             EEEEcCCCcccHHHHHhccccCCEEEEecCCCCCcccChHHHHhCCcEEEecccCCHHHHHHHHHHHHcCCCceeEEEEe
Q 018067          250 GIIDTVSAVHPLMPLIGLLKSQGKLVLVGAPEKPLELPAFSLLMGRKIVGGSMIGGMKETQEMIDFAAKHNIRADIEVIP  329 (361)
Q Consensus       250 ~vid~~g~~~~~~~~~~~l~~~G~~v~~g~~~~~~~~~~~~~~~~~~~i~g~~~~~~~~~~~~~~ll~~~~~~~~~~~~~  329 (361)
                      ++||++|...++..++++++++|+++.+|.......++...++.+++++.|++..+.++++++++++++|++++.+++|+
T Consensus       247 ~vid~~g~~~~~~~~~~~l~~~G~iv~~G~~~~~~~~~~~~~~~~~~~i~g~~~~~~~~~~~~~~~~~~g~l~~~i~~~~  326 (357)
T PLN02514        247 YIIDTVPVFHPLEPYLSLLKLDGKLILMGVINTPLQFVTPMLMLGRKVITGSFIGSMKETEEMLEFCKEKGLTSMIEVVK  326 (357)
T ss_pred             EEEECCCchHHHHHHHHHhccCCEEEEECCCCCCCcccHHHHhhCCcEEEEEecCCHHHHHHHHHHHHhCCCcCcEEEEc
Confidence            99999998766899999999999999999876556777777888999999999988889999999999999988778999


Q ss_pred             cccHHHHHHHHHcCCCceEEEEEeCCc
Q 018067          330 ADYVNTALERLAKADVRYRFVIDVANT  356 (361)
Q Consensus       330 l~~~~~a~~~~~~~~~~gkvvi~~~~~  356 (361)
                      |+|+++||+.+.+++..||+++.+++.
T Consensus       327 l~~~~~A~~~~~~~~~~gk~v~~~~~~  353 (357)
T PLN02514        327 MDYVNTAFERLEKNDVRYRFVVDVAGS  353 (357)
T ss_pred             HHHHHHHHHHHHcCCCceeEEEEcccc
Confidence            999999999999999889999998764

>cd08281 liver_ADH_like1 Zinc-dependent alcohol dehydrogenases (ADH) and class III ADG (AKA formaldehyde dehydrogenase)

Probab=100.00  E-value=4.4e-52  Score=391.74  Aligned_cols=338  Identities=26%  Similarity=0.415  Sum_probs=284.9

Q ss_pred             cceeeeeecCC------CCCccceeeccCCCCCCeEEEEEeeeccCcchHHhHhcCCCCCCCCCcccccccEEEEEeCCC
Q 018067           11 KNAFGWAAKDT------SGVLSPFHFSRRATGEKDVTFKVTHCGICHSDLHMIKNEWGNTIYPIVPGHEIVGVVTEVGSK   84 (361)
Q Consensus        11 ~~~~~~~~~~~------~~~l~~~~~~~p~~~~~evlV~v~~~~i~~~D~~~~~g~~~~~~~p~~lG~e~~G~Vv~vG~~   84 (361)
                      |+++.+..+++      ++.+++++++.|+|+++||+|||++++||++|++.+.|..+ ..+|.++|||++|+|+++|++
T Consensus         1 mka~~~~~~g~~~~~~~~~~l~~~~~~~P~~~~~evlV~v~~~gi~~~D~~~~~g~~~-~~~p~i~GhE~~G~V~~vG~~   79 (371)
T cd08281           1 MRAAVLRETGAPTPYADSRPLVIEEVELDPPGPGEVLVKIAAAGLCHSDLSVINGDRP-RPLPMALGHEAAGVVVEVGEG   79 (371)
T ss_pred             CcceEEEecccccccccCCCceEEEeecCCCCCCeEEEEEEEEeeCccchHhhcCCCC-CCCCccCCccceeEEEEeCCC
Confidence            77888887665      47899999999999999999999999999999999988654 356899999999999999999


Q ss_pred             CCCCCCCCEEEeccccCCCCCCcccccCCCCCCcchhcccccc---------cCCC-----CcCCCcceeEEeecCCceE
Q 018067           85 VSKFKVGDKVGVGCMVGSCRSCDSCAIDLENYCPKVIMTYANK---------YHDG-----TITYGGYSDIMVADEHFVV  150 (361)
Q Consensus        85 v~~~~~GdrV~~~~~~~~c~~c~~c~~~~~~~c~~~~~~~~~~---------~~~~-----~~~~g~~a~~v~v~~~~~~  150 (361)
                      +++|++||||++.+. ..|++|.+|+.|++++|.+.......+         +..+     ....|+|+||+.++.++++
T Consensus        80 v~~~~~GdrV~~~~~-~~cg~c~~c~~g~~~~c~~~~~~~~~g~~~~g~~~~~~~~~~~~~~~g~G~~aey~~v~~~~~~  158 (371)
T cd08281          80 VTDLEVGDHVVLVFV-PSCGHCRPCAEGRPALCEPGAAANGAGTLLSGGRRLRLRGGEINHHLGVSAFAEYAVVSRRSVV  158 (371)
T ss_pred             CCcCCCCCEEEEccC-CCCCCCccccCCCcccccCccccccccccccCcccccccCcccccccCcccceeeEEecccceE
Confidence            999999999987554 489999999999999998863321100         0000     0123799999999999999


Q ss_pred             ECCCCCCcccccccchhhhhhhhHhhhcCCCCCCCEEEEEcCChHHHHHHHHHHHcCC-eEEEEeCCchhHHHHHHHcCC
Q 018067          151 RIPEGTPLDATAPLLCAGITVYSPLRFYGLDKPGMHVGVVGLGGLGHVAVKFAKAMGV-KVTVISTSPSKKSEAIERLGA  229 (361)
Q Consensus       151 ~ip~~~~~~~aa~l~~~~~ta~~~l~~~~~~~~g~~vlV~Gag~vG~~a~~la~~~g~-~vi~~~~~~~~~~~~~~~~g~  229 (361)
                      ++|+++++++|+.+++++.|||+++.....+++|++|||.|+|++|++++|+|+.+|+ +|++++.+++++ ++++++|+
T Consensus       159 ~lP~~l~~~~aa~~~~~~~ta~~~~~~~~~i~~g~~VlV~G~G~vG~~a~~lak~~G~~~Vi~~~~~~~r~-~~a~~~Ga  237 (371)
T cd08281         159 KIDKDVPLEIAALFGCAVLTGVGAVVNTAGVRPGQSVAVVGLGGVGLSALLGAVAAGASQVVAVDLNEDKL-ALARELGA  237 (371)
T ss_pred             ECCCCCChHHhhhhcchHHHHHHHHHhccCCCCCCEEEEECCCHHHHHHHHHHHHcCCCcEEEEcCCHHHH-HHHHHcCC
Confidence            9999999999999999999999998777778999999999999999999999999999 688887777665 45589999


Q ss_pred             CEEecCCCHHHH---HHhcC-CccEEEEcCCCcccHHHHHhccccCCEEEEecCCCC--CcccChHHHHhCCcEEEeccc
Q 018067          230 DSFLVSRDQDEM---QAAMG-TMDGIIDTVSAVHPLMPLIGLLKSQGKLVLVGAPEK--PLELPAFSLLMGRKIVGGSMI  303 (361)
Q Consensus       230 ~~vv~~~~~~~~---~~~~~-g~d~vid~~g~~~~~~~~~~~l~~~G~~v~~g~~~~--~~~~~~~~~~~~~~~i~g~~~  303 (361)
                      ++++++.+++..   .+++. ++|++||++|+..++..++++++++|+++.+|....  ...++...++.|++++.|++.
T Consensus       238 ~~~i~~~~~~~~~~i~~~~~~g~d~vid~~G~~~~~~~~~~~l~~~G~iv~~G~~~~~~~~~~~~~~~~~~~~~i~g~~~  317 (371)
T cd08281         238 TATVNAGDPNAVEQVRELTGGGVDYAFEMAGSVPALETAYEITRRGGTTVTAGLPDPEARLSVPALSLVAEERTLKGSYM  317 (371)
T ss_pred             ceEeCCCchhHHHHHHHHhCCCCCEEEECCCChHHHHHHHHHHhcCCEEEEEccCCCCceeeecHHHHhhcCCEEEEEec
Confidence            999988775433   33433 799999999987779999999999999999997643  356777788889999999887


Q ss_pred             CC---HHHHHHHHHHHHcCCCcee--E-EEEecccHHHHHHHHHcCCCceEEEE
Q 018067          304 GG---MKETQEMIDFAAKHNIRAD--I-EVIPADYVNTALERLAKADVRYRFVI  351 (361)
Q Consensus       304 ~~---~~~~~~~~~ll~~~~~~~~--~-~~~~l~~~~~a~~~~~~~~~~gkvvi  351 (361)
                      .+   .++++++++++.+|++++.  + ++|+|+|+++||+.+.+++..+|+++
T Consensus       318 ~~~~~~~~~~~~~~l~~~g~i~~~~~i~~~~~l~~~~~A~~~~~~~~~~~~vi~  371 (371)
T cd08281         318 GSCVPRRDIPRYLALYLSGRLPVDKLLTHRLPLDEINEGFDRLAAGEAVRQVIL  371 (371)
T ss_pred             CCCChHHHHHHHHHHHHcCCCCchhheeeeecHHHHHHHHHHHhCCCceeeeeC
Confidence            54   5789999999999999753  3 89999999999999999998777653

NAD(P)(H)-dependent oxidoreductases are the major enzymes in the interconversion of alcohols and aldehydes or ketones. This group contains members identified as zinc dependent alcohol dehydrogenases (ADH), and class III ADG (aka formaldehyde dehydrogenase, FDH). Alcohol dehydrogenase in the liver converts ethanol and NAD+ to acetaldehyde and NADH, while in yeast and some other microorganisms ADH catalyzes the conversion acetaldehyde to ethanol in alcoholic fermentation. NAD(P)(H)-dependent oxidoreductases are the major enzymes in the interconversion of alcohols and aldehydes or ketones. Alcohol dehydrogenase in the liver converts ethanol and NAD+ to acetaldehyde and NADH, while in yeast and some other microorganisms ADH catalyzes the conversion acetaldehyde to ethanol in alcoholic fermentation. Class III ADH are also know as glutathione-dependent formaldehyde dehyd

>TIGR02822 adh_fam_2 zinc-binding alcohol dehydrogenase family protein

Probab=100.00  E-value=6.8e-52  Score=383.90  Aligned_cols=323  Identities=27%  Similarity=0.418  Sum_probs=281.5

Q ss_pred             eeeecCCC--CCccceeeccCCCCCCeEEEEEeeeccCcchHHhHhcCCCCCCCCCcccccccEEEEEeCCCCCCCCCCC
Q 018067           15 GWAAKDTS--GVLSPFHFSRRATGEKDVTFKVTHCGICHSDLHMIKNEWGNTIYPIVPGHEIVGVVTEVGSKVSKFKVGD   92 (361)
Q Consensus        15 ~~~~~~~~--~~l~~~~~~~p~~~~~evlV~v~~~~i~~~D~~~~~g~~~~~~~p~~lG~e~~G~Vv~vG~~v~~~~~Gd   92 (361)
                      .+..++++  ..++++++|.|.|+++||+|||+++|||++|++.+.|.++...+|.++|||++|+|+++|+++++|++||
T Consensus         3 ~~~~~g~~~~~~l~~~~~p~P~~~~~evlVkv~~~gi~~~D~~~~~g~~~~~~~p~i~G~e~~G~V~~vG~~v~~~~~Gd   82 (329)
T TIGR02822         3 EVERPGPIEDGPLRFVERPVPRPGPGELLVRVRACGVCRTDLHVSEGDLPVHRPRVTPGHEVVGEVAGRGADAGGFAVGD   82 (329)
T ss_pred             eeecCCcCCCCCceEEeCCCCCCCCCeEEEEEEEEeecchhHHHHcCCCCCCCCCccCCcceEEEEEEECCCCcccCCCC
Confidence            34444554  4688999999999999999999999999999999988765445578999999999999999999999999


Q ss_pred             EEEeccccCCCCCCcccccCCCCCCcchhcccccccCCCCcCCCcceeEEeecCCceEECCCCCCcccccccchhhhhhh
Q 018067           93 KVGVGCMVGSCRSCDSCAIDLENYCPKVIMTYANKYHDGTITYGGYSDIMVADEHFVVRIPEGTPLDATAPLLCAGITVY  172 (361)
Q Consensus        93 rV~~~~~~~~c~~c~~c~~~~~~~c~~~~~~~~~~~~~~~~~~g~~a~~v~v~~~~~~~ip~~~~~~~aa~l~~~~~ta~  172 (361)
                      ||++.+...+|+.|.+|.++.++.|+++.+.       |...+|+|+||+.++.++++++|+++++++++.+++.+.|||
T Consensus        83 ~V~~~~~~~~c~~c~~c~~g~~~~c~~~~~~-------g~~~~G~~aey~~v~~~~~~~lP~~~~~~~aa~l~~~~~ta~  155 (329)
T TIGR02822        83 RVGIAWLRRTCGVCRYCRRGAENLCPASRYT-------GWDTDGGYAEYTTVPAAFAYRLPTGYDDVELAPLLCAGIIGY  155 (329)
T ss_pred             EEEEcCccCcCCCChHHhCcCcccCCCcccC-------CcccCCcceeEEEeccccEEECCCCCCHHHhHHHhccchHHH
Confidence            9998877778999999999999999986432       334579999999999999999999999999999999999999


Q ss_pred             hHhhhcCCCCCCCEEEEEcCChHHHHHHHHHHHcCCeEEEEeCCchhHHHHHHHcCCCEEecCCCHHHHHHhcCCccEEE
Q 018067          173 SPLRFYGLDKPGMHVGVVGLGGLGHVAVKFAKAMGVKVTVISTSPSKKSEAIERLGADSFLVSRDQDEMQAAMGTMDGII  252 (361)
Q Consensus       173 ~~l~~~~~~~~g~~vlV~Gag~vG~~a~~la~~~g~~vi~~~~~~~~~~~~~~~~g~~~vv~~~~~~~~~~~~~g~d~vi  252 (361)
                      +++.+ ..+++|++|||+|+|++|++++|+|+.+|++|++++++++++ ++++++|+++++++.+.+     .+++|+++
T Consensus       156 ~~~~~-~~~~~g~~VlV~G~g~iG~~a~~~a~~~G~~vi~~~~~~~~~-~~a~~~Ga~~vi~~~~~~-----~~~~d~~i  228 (329)
T TIGR02822       156 RALLR-ASLPPGGRLGLYGFGGSAHLTAQVALAQGATVHVMTRGAAAR-RLALALGAASAGGAYDTP-----PEPLDAAI  228 (329)
T ss_pred             HHHHh-cCCCCCCEEEEEcCCHHHHHHHHHHHHCCCeEEEEeCChHHH-HHHHHhCCceeccccccC-----cccceEEE
Confidence            99975 568999999999999999999999999999999888887765 566899999988754321     24789999


Q ss_pred             EcCCCcccHHHHHhccccCCEEEEecCCCC-CcccChHHHHhCCcEEEecccCCHHHHHHHHHHHHcCCCceeEEEEecc
Q 018067          253 DTVSAVHPLMPLIGLLKSQGKLVLVGAPEK-PLELPAFSLLMGRKIVGGSMIGGMKETQEMIDFAAKHNIRADIEVIPAD  331 (361)
Q Consensus       253 d~~g~~~~~~~~~~~l~~~G~~v~~g~~~~-~~~~~~~~~~~~~~~i~g~~~~~~~~~~~~~~ll~~~~~~~~~~~~~l~  331 (361)
                      ++.+...++..++++++++|+++.+|...+ ...++...++.+++++.++.....+++.+++++++++++++..++|+|+
T Consensus       229 ~~~~~~~~~~~~~~~l~~~G~~v~~G~~~~~~~~~~~~~~~~~~~~i~g~~~~~~~~~~~~~~l~~~g~i~~i~~~~~l~  308 (329)
T TIGR02822       229 LFAPAGGLVPPALEALDRGGVLAVAGIHLTDTPPLNYQRHLFYERQIRSVTSNTRADAREFLELAAQHGVRVTTHTYPLS  308 (329)
T ss_pred             ECCCcHHHHHHHHHhhCCCcEEEEEeccCccCCCCCHHHHhhCCcEEEEeecCCHHHHHHHHHHHHhCCCeeEEEEEeHH
Confidence            988877779999999999999999997533 3456677778899999999888888899999999999998655899999


Q ss_pred             cHHHHHHHHHcCCCceEEEE
Q 018067          332 YVNTALERLAKADVRYRFVI  351 (361)
Q Consensus       332 ~~~~a~~~~~~~~~~gkvvi  351 (361)
                      |+++||+.+.+++..||+|+
T Consensus       309 ~~~~A~~~~~~~~~~Gkvvl  328 (329)
T TIGR02822       309 EADRALRDLKAGRFDGAAVL  328 (329)
T ss_pred             HHHHHHHHHHcCCCceEEEe
Confidence            99999999999999999987

Members of this model form a distinct subset of the larger family of oxidoreductases that includes zinc-binding alcohol dehydrogenases and NADPH:quinone reductases (pfam00107). The gene neighborhood of members of this family is not conserved and it appears that no members are characterized. The sequence of the family includes 6 invariant cysteine residues and one invariant histidine. It appears that no member is characterized.

>KOG0022 consensus Alcohol dehydrogenase, class III [Secondary metabolites biosynthesis, transport and catabolism]

Probab=100.00  E-value=3.3e-52  Score=359.42  Aligned_cols=330  Identities=25%  Similarity=0.407  Sum_probs=285.8

Q ss_pred             CCCCCccceeeccCCCCCCeEEEEEeeeccCcchHHhHhcCCCCCCCCCcccccccEEEEEeCCCCCCCCCCCEEEeccc
Q 018067           20 DTSGVLSPFHFSRRATGEKDVTFKVTHCGICHSDLHMIKNEWGNTIYPIVPGHEIVGVVTEVGSKVSKFKVGDKVGVGCM   99 (361)
Q Consensus        20 ~~~~~l~~~~~~~p~~~~~evlV~v~~~~i~~~D~~~~~g~~~~~~~p~~lG~e~~G~Vv~vG~~v~~~~~GdrV~~~~~   99 (361)
                      +....|.++++.+++|+.+||+||+.++++|++|.+.+.|..+...+|++||||++|+|+.+|++|+++++||+| +..+
T Consensus        15 ~a~~PL~IEei~V~pPka~EVRIKI~~t~vCHTD~~~~~g~~~~~~fP~IlGHEaaGIVESvGegV~~vk~GD~V-iplf   93 (375)
T KOG0022|consen   15 EAGKPLVIEEIEVAPPKAHEVRIKILATGVCHTDAYVWSGKDPEGLFPVILGHEAAGIVESVGEGVTTVKPGDHV-IPLF   93 (375)
T ss_pred             cCCCCeeEEEEEeCCCCCceEEEEEEEEeeccccceeecCCCccccCceEecccceeEEEEecCCccccCCCCEE-eecc
Confidence            345568999999999999999999999999999999999988777899999999999999999999999999999 6888


Q ss_pred             cCCCCCCcccccCCCCCCcchhccc--ccccCCCCc-------------CCCcceeEEeecCCceEECCCCCCccccccc
Q 018067          100 VGSCRSCDSCAIDLENYCPKVIMTY--ANKYHDGTI-------------TYGGYSDIMVADEHFVVRIPEGTPLDATAPL  164 (361)
Q Consensus       100 ~~~c~~c~~c~~~~~~~c~~~~~~~--~~~~~~~~~-------------~~g~~a~~v~v~~~~~~~ip~~~~~~~aa~l  164 (361)
                      .+.|+.|.+|++++.|.|.+++...  ..+.+++..             ...+|+||.+++...+++|++..+++.++.+
T Consensus        94 ~p~CgeCk~C~s~ktNlC~~~~~~~~~~~~~~DgtSRF~~~gk~iyHfmg~StFsEYTVv~~~~v~kId~~aPl~kvcLL  173 (375)
T KOG0022|consen   94 TPQCGECKFCKSPKTNLCEKFRADNGKGGMPYDGTSRFTCKGKPIYHFMGTSTFSEYTVVDDISVAKIDPSAPLEKVCLL  173 (375)
T ss_pred             ccCCCCcccccCCCCChhhhhcccccccccccCCceeeeeCCCceEEecccccceeEEEeecceeEecCCCCChhheeEe
Confidence            9999999999999999999985544  222222222             2358999999999999999999999999999


Q ss_pred             chhhhhhhhHhhhcCCCCCCCEEEEEcCChHHHHHHHHHHHcCC-eEEEEeCCchhHHHHHHHcCCCEEecCCC-----H
Q 018067          165 LCAGITVYSPLRFYGLDKPGMHVGVVGLGGLGHVAVKFAKAMGV-KVTVISTSPSKKSEAIERLGADSFLVSRD-----Q  238 (361)
Q Consensus       165 ~~~~~ta~~~l~~~~~~~~g~~vlV~Gag~vG~~a~~la~~~g~-~vi~~~~~~~~~~~~~~~~g~~~vv~~~~-----~  238 (361)
                      .|...|+|.+.+..+++++|+++.|+|.|.+|+++++-||+.|+ ++|.++-++++... +++||+++.+|+.+     .
T Consensus       174 gCGvsTG~GAa~~~Akv~~GstvAVfGLG~VGLav~~Gaka~GAsrIIgvDiN~~Kf~~-ak~fGaTe~iNp~d~~~~i~  252 (375)
T KOG0022|consen  174 GCGVSTGYGAAWNTAKVEPGSTVAVFGLGGVGLAVAMGAKAAGASRIIGVDINPDKFEK-AKEFGATEFINPKDLKKPIQ  252 (375)
T ss_pred             eccccccchhhhhhcccCCCCEEEEEecchHHHHHHHhHHhcCcccEEEEecCHHHHHH-HHhcCcceecChhhccccHH
Confidence            99999999999999999999999999999999999999999999 99999998887654 48999999999874     2


Q ss_pred             HHHHHhcC-CccEEEEcCCCcccHHHHHhccccC-CEEEEecCCCC--CcccChHHHHhCCcEEEecccCC---HHHHHH
Q 018067          239 DEMQAAMG-TMDGIIDTVSAVHPLMPLIGLLKSQ-GKLVLVGAPEK--PLELPAFSLLMGRKIVGGSMIGG---MKETQE  311 (361)
Q Consensus       239 ~~~~~~~~-g~d~vid~~g~~~~~~~~~~~l~~~-G~~v~~g~~~~--~~~~~~~~~~~~~~~i~g~~~~~---~~~~~~  311 (361)
                      +.+.++++ |+|+.|||+|+.+++.+++.+...+ |+-+.+|....  .+.+.++.++. +.++.|+..+.   ..+++.
T Consensus       253 evi~EmTdgGvDysfEc~G~~~~m~~al~s~h~GwG~sv~iGv~~~~~~i~~~p~~l~~-GR~~~Gs~FGG~K~~~~iP~  331 (375)
T KOG0022|consen  253 EVIIEMTDGGVDYSFECIGNVSTMRAALESCHKGWGKSVVIGVAAAGQEISTRPFQLVT-GRTWKGSAFGGFKSKSDIPK  331 (375)
T ss_pred             HHHHHHhcCCceEEEEecCCHHHHHHHHHHhhcCCCeEEEEEecCCCcccccchhhhcc-ccEEEEEecccccchhhhhH
Confidence            45667775 8999999999999999999999888 99999998654  35666766654 55666665544   578999


Q ss_pred             HHHHHHcCCCcee--E-EEEecccHHHHHHHHHcCCCceEEEEEe
Q 018067          312 MIDFAAKHNIRAD--I-EVIPADYVNTALERLAKADVRYRFVIDV  353 (361)
Q Consensus       312 ~~~ll~~~~~~~~--~-~~~~l~~~~~a~~~~~~~~~~gkvvi~~  353 (361)
                      +++.+.+++++..  + |++||+++++||+.|.+++.. |-|+.+
T Consensus       332 lV~~y~~~~l~ld~~ITh~l~f~~In~AF~ll~~Gksi-R~vl~~  375 (375)
T KOG0022|consen  332 LVKDYMKKKLNLDEFITHELPFEEINKAFDLLHEGKSI-RCVLWM  375 (375)
T ss_pred             HHHHHHhCccchhhhhhcccCHHHHHHHHHHHhCCceE-EEEEeC
Confidence            9999999988765  3 999999999999999999975 777653

>PRK09880 L-idonate 5-dehydrogenase; Provisional

Probab=100.00  E-value=2.9e-51  Score=382.26  Aligned_cols=331  Identities=21%  Similarity=0.283  Sum_probs=272.3

Q ss_pred             ccceeeeeecCCCCCccceeeccCCCCCCeEEEEEeeeccCcchHHhHh-cCCC--CCCCCCcccccccEEEEEeCCCCC
Q 018067           10 PKNAFGWAAKDTSGVLSPFHFSRRATGEKDVTFKVTHCGICHSDLHMIK-NEWG--NTIYPIVPGHEIVGVVTEVGSKVS   86 (361)
Q Consensus        10 ~~~~~~~~~~~~~~~l~~~~~~~p~~~~~evlV~v~~~~i~~~D~~~~~-g~~~--~~~~p~~lG~e~~G~Vv~vG~~v~   86 (361)
                      -+++..+   .+++.+++++++.| ++++||||||+++|||++|++.++ |..+  ...+|.++|||++|+|+++  +++
T Consensus         4 ~~~~~~~---~~~~~~~~~~~~~p-~~~~evlVkv~a~gic~sD~~~~~~g~~~~~~~~~p~v~GhE~~G~V~~v--~v~   77 (343)
T PRK09880          4 KTQSCVV---AGKKDVAVTEQEIE-WNNNGTLVQITRGGICGSDLHYYQEGKVGNFVIKAPMVLGHEVIGKIVHS--DSS   77 (343)
T ss_pred             cceEEEE---ecCCceEEEecCCC-CCCCeEEEEEEEEEECccccHhhccCCcccccccCCcccCcccEEEEEEe--cCc
Confidence            3444444   36778999999987 689999999999999999999875 3332  2357899999999999999  688


Q ss_pred             CCCCCCEEEeccccCCCCCCcccccCCCCCCcchhcccccccCCCCcCCCcceeEEeecCCceEECCCCCCcccccccch
Q 018067           87 KFKVGDKVGVGCMVGSCRSCDSCAIDLENYCPKVIMTYANKYHDGTITYGGYSDIMVADEHFVVRIPEGTPLDATAPLLC  166 (361)
Q Consensus        87 ~~~~GdrV~~~~~~~~c~~c~~c~~~~~~~c~~~~~~~~~~~~~~~~~~g~~a~~v~v~~~~~~~ip~~~~~~~aa~l~~  166 (361)
                      +|++||||++.+.. +|++|.+|.++.++.|++..+.  +.........|+|+||++++++.++++|+++++++++ +..
T Consensus        78 ~~~vGdrV~~~~~~-~cg~c~~c~~g~~~~c~~~~~~--g~~~~~~~~~G~~aey~~v~~~~~~~~P~~l~~~~aa-~~~  153 (343)
T PRK09880         78 GLKEGQTVAINPSK-PCGHCKYCLSHNENQCTTMRFF--GSAMYFPHVDGGFTRYKVVDTAQCIPYPEKADEKVMA-FAE  153 (343)
T ss_pred             cCCCCCEEEECCCC-CCcCChhhcCCChhhCCCccee--ecccccCCCCCceeeeEEechHHeEECCCCCCHHHHH-hhc
Confidence            99999999987665 8999999999999999986431  1100011247999999999999999999999987655 456


Q ss_pred             hhhhhhhHhhhcCCCCCCCEEEEEcCChHHHHHHHHHHHcCC-eEEEEeCCchhHHHHHHHcCCCEEecCCCHHHHH--H
Q 018067          167 AGITVYSPLRFYGLDKPGMHVGVVGLGGLGHVAVKFAKAMGV-KVTVISTSPSKKSEAIERLGADSFLVSRDQDEMQ--A  243 (361)
Q Consensus       167 ~~~ta~~~l~~~~~~~~g~~vlV~Gag~vG~~a~~la~~~g~-~vi~~~~~~~~~~~~~~~~g~~~vv~~~~~~~~~--~  243 (361)
                      ++.+||+++.+.. ..+|++|+|+|+|++|++++|+|+++|+ +|++++++++++ ++++++|++.++++++++..+  .
T Consensus       154 ~~~~a~~al~~~~-~~~g~~VlV~G~G~vG~~aiqlak~~G~~~Vi~~~~~~~~~-~~a~~lGa~~vi~~~~~~~~~~~~  231 (343)
T PRK09880        154 PLAVAIHAAHQAG-DLQGKRVFVSGVGPIGCLIVAAVKTLGAAEIVCADVSPRSL-SLAREMGADKLVNPQNDDLDHYKA  231 (343)
T ss_pred             HHHHHHHHHHhcC-CCCCCEEEEECCCHHHHHHHHHHHHcCCcEEEEEeCCHHHH-HHHHHcCCcEEecCCcccHHHHhc
Confidence            7789999998765 4689999999999999999999999999 687787777665 555889999999887644222  1


Q ss_pred             hcCCccEEEEcCCCcccHHHHHhccccCCEEEEecCCCCCcccChHHHHhCCcEEEecccCCHHHHHHHHHHHHcCCCce
Q 018067          244 AMGTMDGIIDTVSAVHPLMPLIGLLKSQGKLVLVGAPEKPLELPAFSLLMGRKIVGGSMIGGMKETQEMIDFAAKHNIRA  323 (361)
Q Consensus       244 ~~~g~d~vid~~g~~~~~~~~~~~l~~~G~~v~~g~~~~~~~~~~~~~~~~~~~i~g~~~~~~~~~~~~~~ll~~~~~~~  323 (361)
                      ..+++|++||++|++.++..++++++++|+++.+|.......++...++.|++++.|++.. .+++++++++++++++++
T Consensus       232 ~~g~~D~vid~~G~~~~~~~~~~~l~~~G~iv~~G~~~~~~~~~~~~~~~k~~~i~g~~~~-~~~~~~~~~l~~~g~i~~  310 (343)
T PRK09880        232 EKGYFDVSFEVSGHPSSINTCLEVTRAKGVMVQVGMGGAPPEFPMMTLIVKEISLKGSFRF-TEEFNTAVSWLANGVINP  310 (343)
T ss_pred             cCCCCCEEEECCCCHHHHHHHHHHhhcCCEEEEEccCCCCCccCHHHHHhCCcEEEEEeec-cccHHHHHHHHHcCCCCc
Confidence            2246999999999876689999999999999999986555677778888999999998764 467999999999999986


Q ss_pred             --eE-EEEecccHHHHHHHHHcCCCceEEEEEe
Q 018067          324 --DI-EVIPADYVNTALERLAKADVRYRFVIDV  353 (361)
Q Consensus       324 --~~-~~~~l~~~~~a~~~~~~~~~~gkvvi~~  353 (361)
                        .+ ++|+|+|+++||+.+.+++..||+++.+
T Consensus       311 ~~~i~~~~~l~~~~~A~~~~~~~~~~gKvvl~~  343 (343)
T PRK09880        311 LPLLSAEYPFTDLEEALIFAGDKTQAAKVQLVF  343 (343)
T ss_pred             hhheEEEEEHHHHHHHHHHHhcCCCceEEEEeC
Confidence              33 8999999999999999888779999864

>cd08239 THR_DH_like L-threonine dehydrogenase (TDH)-like

Probab=100.00  E-value=7.6e-51  Score=379.15  Aligned_cols=329  Identities=26%  Similarity=0.372  Sum_probs=279.3

Q ss_pred             cceeeeeecCCCCCccceeeccCCCCCCeEEEEEeeeccCcchHHhHhcCCCC-CCCCCcccccccEEEEEeCCCCCCCC
Q 018067           11 KNAFGWAAKDTSGVLSPFHFSRRATGEKDVTFKVTHCGICHSDLHMIKNEWGN-TIYPIVPGHEIVGVVTEVGSKVSKFK   89 (361)
Q Consensus        11 ~~~~~~~~~~~~~~l~~~~~~~p~~~~~evlV~v~~~~i~~~D~~~~~g~~~~-~~~p~~lG~e~~G~Vv~vG~~v~~~~   89 (361)
                      |+++.+.   +++.+++++++.|+++++||+||+.+++||++|++.+.+.... ..+|.++|||++|+|+++|+++++|+
T Consensus         1 mka~~~~---~~~~l~~~~~~~p~~~~~evlV~v~~~gi~~~D~~~~~~~~~~~~~~p~i~G~e~~G~V~~vG~~v~~~~   77 (339)
T cd08239           1 MRGAVFP---GDRTVELREFPVPVPGPGEVLLRVKASGLCGSDLHYYYHGHRAPAYQGVIPGHEPAGVVVAVGPGVTHFR   77 (339)
T ss_pred             CeEEEEe---cCCceEEEecCCCCCCCCeEEEEEEEEEeccccHHHHcCCCCccCCCCceeccCceEEEEEECCCCccCC
Confidence            5566653   5678999999999999999999999999999999988765432 23578999999999999999999999


Q ss_pred             CCCEEEeccccCCCCCCcccccCCCCCCcchhcccccccCCCCcCCCcceeEEeecCCceEECCCCCCcccccccchhhh
Q 018067           90 VGDKVGVGCMVGSCRSCDSCAIDLENYCPKVIMTYANKYHDGTITYGGYSDIMVADEHFVVRIPEGTPLDATAPLLCAGI  169 (361)
Q Consensus        90 ~GdrV~~~~~~~~c~~c~~c~~~~~~~c~~~~~~~~~~~~~~~~~~g~~a~~v~v~~~~~~~ip~~~~~~~aa~l~~~~~  169 (361)
                      +||||++.+.. +|++|.+|.+|.++.|.+....      .|....|+|+||+.++.++++++|+++++++|+.+++++.
T Consensus        78 ~Gd~V~~~~~~-~c~~c~~c~~g~~~~c~~~~~~------~g~~~~G~~ae~~~v~~~~~~~~P~~~~~~~aa~l~~~~~  150 (339)
T cd08239          78 VGDRVMVYHYV-GCGACRNCRRGWMQLCTSKRAA------YGWNRDGGHAEYMLVPEKTLIPLPDDLSFADGALLLCGIG  150 (339)
T ss_pred             CCCEEEECCCC-CCCCChhhhCcCcccCcCcccc------cccCCCCcceeEEEechHHeEECCCCCCHHHhhhhcchHH
Confidence            99999876655 8999999999999999875421      1334679999999999999999999999999999999999


Q ss_pred             hhhhHhhhcCCCCCCCEEEEEcCChHHHHHHHHHHHcCCe-EEEEeCCchhHHHHHHHcCCCEEecCCCHH--HHHHhcC
Q 018067          170 TVYSPLRFYGLDKPGMHVGVVGLGGLGHVAVKFAKAMGVK-VTVISTSPSKKSEAIERLGADSFLVSRDQD--EMQAAMG  246 (361)
Q Consensus       170 ta~~~l~~~~~~~~g~~vlV~Gag~vG~~a~~la~~~g~~-vi~~~~~~~~~~~~~~~~g~~~vv~~~~~~--~~~~~~~  246 (361)
                      |||+++.+. .+++|++|||+|+|++|++++|+|+.+|++ |++++++++++.. ++++|++.++++++.+  .+.+++.
T Consensus       151 ta~~~l~~~-~~~~g~~vlV~G~G~vG~~~~~~ak~~G~~~vi~~~~~~~~~~~-~~~~ga~~~i~~~~~~~~~~~~~~~  228 (339)
T cd08239         151 TAYHALRRV-GVSGRDTVLVVGAGPVGLGALMLARALGAEDVIGVDPSPERLEL-AKALGADFVINSGQDDVQEIRELTS  228 (339)
T ss_pred             HHHHHHHhc-CCCCCCEEEEECCCHHHHHHHHHHHHcCCCEEEEECCCHHHHHH-HHHhCCCEEEcCCcchHHHHHHHhC
Confidence            999999765 478999999999999999999999999998 8888777776554 4889999999887643  2333333


Q ss_pred             --CccEEEEcCCCcccHHHHHhccccCCEEEEecCCCCCcccC-hHHHHhCCcEEEecccCCHHHHHHHHHHHHcCCCce
Q 018067          247 --TMDGIIDTVSAVHPLMPLIGLLKSQGKLVLVGAPEKPLELP-AFSLLMGRKIVGGSMIGGMKETQEMIDFAAKHNIRA  323 (361)
Q Consensus       247 --g~d~vid~~g~~~~~~~~~~~l~~~G~~v~~g~~~~~~~~~-~~~~~~~~~~i~g~~~~~~~~~~~~~~ll~~~~~~~  323 (361)
                        ++|++||++|+...+..++++++++|+++.+|..... .+. ...++.+++++.|++..+.++++++++++.++++++
T Consensus       229 ~~~~d~vid~~g~~~~~~~~~~~l~~~G~~v~~g~~~~~-~~~~~~~~~~~~~~i~g~~~~~~~~~~~~~~~~~~g~i~~  307 (339)
T cd08239         229 GAGADVAIECSGNTAARRLALEAVRPWGRLVLVGEGGEL-TIEVSNDLIRKQRTLIGSWYFSVPDMEECAEFLARHKLEV  307 (339)
T ss_pred             CCCCCEEEECCCCHHHHHHHHHHhhcCCEEEEEcCCCCc-ccCcHHHHHhCCCEEEEEecCCHHHHHHHHHHHHcCCCCh
Confidence              7999999999987668899999999999999975432 333 345677999999999888889999999999999875


Q ss_pred             --eE-EEEecccHHHHHHHHHcCCCceEEEEEe
Q 018067          324 --DI-EVIPADYVNTALERLAKADVRYRFVIDV  353 (361)
Q Consensus       324 --~~-~~~~l~~~~~a~~~~~~~~~~gkvvi~~  353 (361)
                        .+ ++|+|+++++||+.+++++ .||+|+.+
T Consensus       308 ~~~i~~~~~l~~~~~a~~~~~~~~-~gKvvi~~  339 (339)
T cd08239         308 DRLVTHRFGLDQAPEAYALFAQGE-SGKVVFVF  339 (339)
T ss_pred             hHeEEEEecHHHHHHHHHHHHcCC-ceEEEEeC
Confidence              34 8999999999999998876 69999864

MDR/AHD-like proteins, including a protein annotated as a threonine dehydrogenase. L-threonine dehydrogenase (TDH) catalyzes the zinc-dependent formation of 2-amino-3-ketobutyrate from L-threonine via NAD(H)-dependent oxidation. The zinc-dependent alcohol dehydrogenases (ADHs) catalyze the NAD(P)(H)-dependent interconversion of alcohols to aldehydes or ketones. Zinc-dependent ADHs are medium chain dehydrogenase/reductase type proteins (MDRs) and have a NAD(P)(H)-binding domain in a Rossmann fold of an beta-alpha form. The N-terminal region typically has an all-beta catalytic domain. In addition to alcohol dehydrogenases, this group includes quinone reductase, sorbitol dehydrogenase, formaldehyde dehydrogenase, butanediol DH, ketose reductase, cinnamyl reductase, and numerous others. These proteins typically form dimers (typically higher plants, mammals) or tetramers (yeast, bacteria), and generally have 2 tightly bound zinc at

>PLN02827 Alcohol dehydrogenase-like

Probab=100.00  E-value=3.2e-50  Score=379.32  Aligned_cols=344  Identities=22%  Similarity=0.328  Sum_probs=278.2

Q ss_pred             CCCCcccceeeeeecCCCCCccceeeccCCCCCCeEEEEEeeeccCcchHHhHhcCCCCCCCCCcccccccEEEEEeCCC
Q 018067            5 PEQEHPKNAFGWAAKDTSGVLSPFHFSRRATGEKDVTFKVTHCGICHSDLHMIKNEWGNTIYPIVPGHEIVGVVTEVGSK   84 (361)
Q Consensus         5 ~~~~~~~~~~~~~~~~~~~~l~~~~~~~p~~~~~evlV~v~~~~i~~~D~~~~~g~~~~~~~p~~lG~e~~G~Vv~vG~~   84 (361)
                      .++|..-.+.++...+.++.++++++|.|+++++||+|||+++|||++|++.+.+..   .+|.++|||++|+|+++|++
T Consensus         5 ~~~~~~~~mka~~~~~~~~~~~~~e~~~P~~~~~eVlVkv~~~gic~sD~~~~~g~~---~~p~i~GhE~~G~V~~vG~~   81 (378)
T PLN02827          5 ISQPNVITCRAAVAWGAGEALVMEEVEVSPPQPLEIRIKVVSTSLCRSDLSAWESQA---LFPRIFGHEASGIVESIGEG   81 (378)
T ss_pred             ccCcccceeEEEEEecCCCCceEEEeecCCCCCCEEEEEEEEEecChhHHHHhcCCC---CCCeeecccceEEEEEcCCC
Confidence            344544344444444455678889999999999999999999999999999887642   46789999999999999999


Q ss_pred             CCCCCCCCEEEeccccCCCCCCcccccCCCCCCcchhcccccccC---------CC-----CcCCCcceeEEeecCCceE
Q 018067           85 VSKFKVGDKVGVGCMVGSCRSCDSCAIDLENYCPKVIMTYANKYH---------DG-----TITYGGYSDIMVADEHFVV  150 (361)
Q Consensus        85 v~~~~~GdrV~~~~~~~~c~~c~~c~~~~~~~c~~~~~~~~~~~~---------~~-----~~~~g~~a~~v~v~~~~~~  150 (361)
                      +++|++||||++.+.. +|++|.+|.++.+++|.++.....+..+         .|     ....|+|+||+.++.+.++
T Consensus        82 v~~~~~GdrV~~~~~~-~cg~C~~C~~g~~~~C~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~~G~~aeyv~v~~~~~~  160 (378)
T PLN02827         82 VTEFEKGDHVLTVFTG-ECGSCRHCISGKSNMCQVLGLERKGVMHSDQKTRFSIKGKPVYHYCAVSSFSEYTVVHSGCAV  160 (378)
T ss_pred             CcccCCCCEEEEecCC-CCCCChhhhCcCcccccCccccccccccCCCcccccccCcccccccccccceeeEEechhheE
Confidence            9999999999876554 8999999999999999875321100000         01     0135899999999999999


Q ss_pred             ECCCCCCcccccccchhhhhhhhHhhhcCCCCCCCEEEEEcCChHHHHHHHHHHHcCCe-EEEEeCCchhHHHHHHHcCC
Q 018067          151 RIPEGTPLDATAPLLCAGITVYSPLRFYGLDKPGMHVGVVGLGGLGHVAVKFAKAMGVK-VTVISTSPSKKSEAIERLGA  229 (361)
Q Consensus       151 ~ip~~~~~~~aa~l~~~~~ta~~~l~~~~~~~~g~~vlV~Gag~vG~~a~~la~~~g~~-vi~~~~~~~~~~~~~~~~g~  229 (361)
                      ++|+++++++++.+.+++.++|+++++..++++|++|||+|+|++|++++|+|+++|++ |++++.+++++ ++++++|+
T Consensus       161 ~iP~~l~~~~aa~l~~~~~~a~~~~~~~~~~~~g~~VlV~G~G~vG~~~iqlak~~G~~~vi~~~~~~~~~-~~a~~lGa  239 (378)
T PLN02827        161 KVDPLAPLHKICLLSCGVAAGLGAAWNVADVSKGSSVVIFGLGTVGLSVAQGAKLRGASQIIGVDINPEKA-EKAKTFGV  239 (378)
T ss_pred             ECCCCCCHHHhhhhcchhHhhHHHHHhhcCCCCCCEEEEECCCHHHHHHHHHHHHcCCCeEEEECCCHHHH-HHHHHcCC
Confidence            99999999999999888889998877777789999999999999999999999999995 66666566655 55589999


Q ss_pred             CEEecCCCH--H---HHHHhcC-CccEEEEcCCCcccHHHHHhccccC-CEEEEecCCCCCcccCh-HHHHhCCcEEEec
Q 018067          230 DSFLVSRDQ--D---EMQAAMG-TMDGIIDTVSAVHPLMPLIGLLKSQ-GKLVLVGAPEKPLELPA-FSLLMGRKIVGGS  301 (361)
Q Consensus       230 ~~vv~~~~~--~---~~~~~~~-g~d~vid~~g~~~~~~~~~~~l~~~-G~~v~~g~~~~~~~~~~-~~~~~~~~~i~g~  301 (361)
                      +.++++++.  +   .+.++++ ++|++||++|....+..+++.++++ |+++.+|.......+.. ..++.+++++.|+
T Consensus       240 ~~~i~~~~~~~~~~~~v~~~~~~g~d~vid~~G~~~~~~~~l~~l~~g~G~iv~~G~~~~~~~~~~~~~~~~~~~~i~g~  319 (378)
T PLN02827        240 TDFINPNDLSEPIQQVIKRMTGGGADYSFECVGDTGIATTALQSCSDGWGLTVTLGVPKAKPEVSAHYGLFLSGRTLKGS  319 (378)
T ss_pred             cEEEcccccchHHHHHHHHHhCCCCCEEEECCCChHHHHHHHHhhccCCCEEEEECCcCCCccccccHHHHhcCceEEee
Confidence            998887652  2   2333443 7999999999876689999999998 99999998654444433 3567799999998


Q ss_pred             ccCC---HHHHHHHHHHHHcCCCce--eE-EEEecccHHHHHHHHHcCCCceEEEEEeC
Q 018067          302 MIGG---MKETQEMIDFAAKHNIRA--DI-EVIPADYVNTALERLAKADVRYRFVIDVA  354 (361)
Q Consensus       302 ~~~~---~~~~~~~~~ll~~~~~~~--~~-~~~~l~~~~~a~~~~~~~~~~gkvvi~~~  354 (361)
                      ....   ..++++++++++++++++  .+ ++|+|+++++||+.+.+++. +|+||.+.
T Consensus       320 ~~~~~~~~~~~~~~~~~~~~g~i~~~~~i~~~~~le~~~~A~~~~~~~~~-~k~vi~~~  377 (378)
T PLN02827        320 LFGGWKPKSDLPSLVDKYMNKEIMIDEFITHNLSFDEINKAFELMREGKC-LRCVIHMP  377 (378)
T ss_pred             ecCCCchhhhHHHHHHHHHcCCCChHHheEEEecHHHHHHHHHHHHCCCc-eEEEEEec
Confidence            7653   357889999999999997  45 89999999999999999886 79999764

>PLN02740 Alcohol dehydrogenase-like

Probab=100.00  E-value=2.9e-50  Score=380.41  Aligned_cols=340  Identities=23%  Similarity=0.339  Sum_probs=277.3

Q ss_pred             CcccceeeeeecCCCCCccceeeccCCCCCCeEEEEEeeeccCcchHHhHhcCCC-CCCCCCcccccccEEEEEeCCCCC
Q 018067            8 EHPKNAFGWAAKDTSGVLSPFHFSRRATGEKDVTFKVTHCGICHSDLHMIKNEWG-NTIYPIVPGHEIVGVVTEVGSKVS   86 (361)
Q Consensus         8 ~~~~~~~~~~~~~~~~~l~~~~~~~p~~~~~evlV~v~~~~i~~~D~~~~~g~~~-~~~~p~~lG~e~~G~Vv~vG~~v~   86 (361)
                      +.+|+++.+..  ..+.+++++++.|.++++||+|||+++|||++|++.+.|..+ ...+|.++|||++|+|+++|++++
T Consensus         8 ~~~mka~~~~~--~~~~~~~~e~~~P~~~~~eVlV~v~~~gic~sD~~~~~g~~~~~~~~p~i~GhE~~G~V~~vG~~v~   85 (381)
T PLN02740          8 VITCKAAVAWG--PGEPLVMEEIRVDPPQKMEVRIKILYTSICHTDLSAWKGENEAQRAYPRILGHEAAGIVESVGEGVE   85 (381)
T ss_pred             ceeeEEEEEec--CCCCcEEEEeeCCCCCCCeEEEEEEEEecChhhHHHhCCCCcccCCCCccccccceEEEEEeCCCCC
Confidence            34566665533  333477889999999999999999999999999999988653 235789999999999999999999


Q ss_pred             CCCCCCEEEeccccCCCCCCcccccCCCCCCcchhcc-cc------cccCC----------CCcCCCcceeEEeecCCce
Q 018067           87 KFKVGDKVGVGCMVGSCRSCDSCAIDLENYCPKVIMT-YA------NKYHD----------GTITYGGYSDIMVADEHFV  149 (361)
Q Consensus        87 ~~~~GdrV~~~~~~~~c~~c~~c~~~~~~~c~~~~~~-~~------~~~~~----------~~~~~g~~a~~v~v~~~~~  149 (361)
                      +|++||||++.+.. +|++|.+|.++.++.|.++... +.      +....          .....|+|+||+.++.+.+
T Consensus        86 ~~~vGdrV~~~~~~-~cg~C~~c~~g~~~~C~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~G~~aey~~v~~~~~  164 (381)
T PLN02740         86 DLKAGDHVIPIFNG-ECGDCRYCKRDKTNLCETYRVDPFKSVMVNDGKTRFSTKGDGQPIYHFLNTSTFTEYTVLDSACV  164 (381)
T ss_pred             cCCCCCEEEecCCC-CCCCChhhcCCCcccccCccccccccccccCCCcccccccCCCcccccccCccceeEEEEehHHe
Confidence            99999999877654 8999999999999999986421 10      00000          0113699999999999999


Q ss_pred             EECCCCCCcccccccchhhhhhhhHhhhcCCCCCCCEEEEEcCChHHHHHHHHHHHcCC-eEEEEeCCchhHHHHHHHcC
Q 018067          150 VRIPEGTPLDATAPLLCAGITVYSPLRFYGLDKPGMHVGVVGLGGLGHVAVKFAKAMGV-KVTVISTSPSKKSEAIERLG  228 (361)
Q Consensus       150 ~~ip~~~~~~~aa~l~~~~~ta~~~l~~~~~~~~g~~vlV~Gag~vG~~a~~la~~~g~-~vi~~~~~~~~~~~~~~~~g  228 (361)
                      +++|+++++++++.+++.+.|||+++.....+++|++|||+|+|++|++++|+|+.+|+ +|+++++++++++.+ +++|
T Consensus       165 ~~iP~~~~~~~aa~l~~~~~ta~~~~~~~~~~~~g~~VlV~G~G~vG~~a~q~ak~~G~~~Vi~~~~~~~r~~~a-~~~G  243 (381)
T PLN02740        165 VKIDPNAPLKKMSLLSCGVSTGVGAAWNTANVQAGSSVAIFGLGAVGLAVAEGARARGASKIIGVDINPEKFEKG-KEMG  243 (381)
T ss_pred             EECCCCCCHHHhhhhcccchhhHHHHHhccCCCCCCEEEEECCCHHHHHHHHHHHHCCCCcEEEEcCChHHHHHH-HHcC
Confidence            99999999999999999999999988777788999999999999999999999999999 688888877765544 8899


Q ss_pred             CCEEecCCCH-----HHHHHhcC-CccEEEEcCCCcccHHHHHhccccC-CEEEEecCCCCC--cccChHHHHhCCcEEE
Q 018067          229 ADSFLVSRDQ-----DEMQAAMG-TMDGIIDTVSAVHPLMPLIGLLKSQ-GKLVLVGAPEKP--LELPAFSLLMGRKIVG  299 (361)
Q Consensus       229 ~~~vv~~~~~-----~~~~~~~~-g~d~vid~~g~~~~~~~~~~~l~~~-G~~v~~g~~~~~--~~~~~~~~~~~~~~i~  299 (361)
                      ++.++++++.     +.+.++++ ++|++||++|+..++..++.+++++ |+++.+|.....  +.+....+ .++++|.
T Consensus       244 a~~~i~~~~~~~~~~~~v~~~~~~g~dvvid~~G~~~~~~~a~~~~~~g~G~~v~~G~~~~~~~~~~~~~~~-~~~~~i~  322 (381)
T PLN02740        244 ITDFINPKDSDKPVHERIREMTGGGVDYSFECAGNVEVLREAFLSTHDGWGLTVLLGIHPTPKMLPLHPMEL-FDGRSIT  322 (381)
T ss_pred             CcEEEecccccchHHHHHHHHhCCCCCEEEECCCChHHHHHHHHhhhcCCCEEEEEccCCCCceecccHHHH-hcCCeEE
Confidence            9998887652     23444444 7999999999877799999999996 999999986543  34444433 3788999


Q ss_pred             ecccCC---HHHHHHHHHHHHcCCCce--eE-EEEecccHHHHHHHHHcCCCceEEEEEe
Q 018067          300 GSMIGG---MKETQEMIDFAAKHNIRA--DI-EVIPADYVNTALERLAKADVRYRFVIDV  353 (361)
Q Consensus       300 g~~~~~---~~~~~~~~~ll~~~~~~~--~~-~~~~l~~~~~a~~~~~~~~~~gkvvi~~  353 (361)
                      |+..++   ..+++++++++.++++++  .+ ++|+|+|+++||+.+.+++. .|++|++
T Consensus       323 g~~~~~~~~~~~~~~~~~~~~~g~i~~~~~it~~~~l~e~~~A~~~~~~~~~-~k~~~~~  381 (381)
T PLN02740        323 GSVFGDFKGKSQLPNLAKQCMQGVVNLDGFITHELPFEKINEAFQLLEDGKA-LRCLLHL  381 (381)
T ss_pred             EEecCCCCcHHHHHHHHHHHHcCCCChHHheeEEecHHHHHHHHHHHHCCCc-eeEEEeC
Confidence            887654   457899999999999875  34 89999999999999998875 6999874

>TIGR03451 mycoS_dep_FDH mycothiol-dependent formaldehyde dehydrogenase

Probab=100.00  E-value=2.2e-50  Score=378.50  Aligned_cols=337  Identities=24%  Similarity=0.365  Sum_probs=280.6

Q ss_pred             ccceeeeeecCCCCCccceeeccCCCCCCeEEEEEeeeccCcchHHhHhcCCCCCCCCCcccccccEEEEEeCCCCCCCC
Q 018067           10 PKNAFGWAAKDTSGVLSPFHFSRRATGEKDVTFKVTHCGICHSDLHMIKNEWGNTIYPIVPGHEIVGVVTEVGSKVSKFK   89 (361)
Q Consensus        10 ~~~~~~~~~~~~~~~l~~~~~~~p~~~~~evlV~v~~~~i~~~D~~~~~g~~~~~~~p~~lG~e~~G~Vv~vG~~v~~~~   89 (361)
                      +|+++.+..++.|  ++++++|.|+++++||+|||.++|+|++|++.+.|..+ ..+|.++|||++|+|+++|+++++|+
T Consensus         1 ~mka~~~~~~~~~--~~~~~~~~p~~~~~evlV~v~~~gi~~~D~~~~~g~~~-~~~p~i~G~e~~G~V~~vG~~v~~~~   77 (358)
T TIGR03451         1 TVRGVIARSKGAP--VELETIVVPDPGPGEVIVDIQACGVCHTDLHYREGGIN-DEFPFLLGHEAAGVVEAVGEGVTDVA   77 (358)
T ss_pred             CcEEEEEccCCCC--CEEEEEECCCCCCCeEEEEEEEEeecHHHHHHhcCCcc-ccCCcccccceEEEEEEeCCCCcccC
Confidence            5888888765544  78899999999999999999999999999999888654 35789999999999999999999999


Q ss_pred             CCCEEEeccccCCCCCCcccccCCCCCCcchhcccccc-cCCC-----CcCCCcceeEEeecCCceEECCCCCCcccccc
Q 018067           90 VGDKVGVGCMVGSCRSCDSCAIDLENYCPKVIMTYANK-YHDG-----TITYGGYSDIMVADEHFVVRIPEGTPLDATAP  163 (361)
Q Consensus        90 ~GdrV~~~~~~~~c~~c~~c~~~~~~~c~~~~~~~~~~-~~~~-----~~~~g~~a~~v~v~~~~~~~ip~~~~~~~aa~  163 (361)
                      +||||++.+.. +|+.|.+|.++.+++|.......... ...|     ....|+|+||+.+++++++++|+++++++|+.
T Consensus        78 ~GdrV~~~~~~-~cg~c~~c~~g~~~~c~~~~~~~~~~~~~~g~~~~~~~~~G~~aey~~v~~~~~~~ip~~~~~~~aa~  156 (358)
T TIGR03451        78 PGDYVVLNWRA-VCGQCRACKRGRPWYCFDTHNATQKMTLTDGTELSPALGIGAFAEKTLVHAGQCTKVDPAADPAAAGL  156 (358)
T ss_pred             CCCEEEEccCC-CCCCChHHhCcCcccCcCccccccccccccCcccccccccccccceEEEehhheEECCCCCChhHhhh
Confidence            99999887654 89999999999999998642111000 0001     11369999999999999999999999999999


Q ss_pred             cchhhhhhhhHhhhcCCCCCCCEEEEEcCChHHHHHHHHHHHcCCe-EEEEeCCchhHHHHHHHcCCCEEecCCCHHH--
Q 018067          164 LLCAGITVYSPLRFYGLDKPGMHVGVVGLGGLGHVAVKFAKAMGVK-VTVISTSPSKKSEAIERLGADSFLVSRDQDE--  240 (361)
Q Consensus       164 l~~~~~ta~~~l~~~~~~~~g~~vlV~Gag~vG~~a~~la~~~g~~-vi~~~~~~~~~~~~~~~~g~~~vv~~~~~~~--  240 (361)
                      +++.+.++|+++.....+++|++|||+|+|++|++++|+|+.+|++ |++++++++++. +++++|++.++++++++.  
T Consensus       157 l~~~~~ta~~~~~~~~~~~~g~~VlV~G~g~vG~~a~~~ak~~G~~~Vi~~~~~~~~~~-~~~~~Ga~~~i~~~~~~~~~  235 (358)
T TIGR03451       157 LGCGVMAGLGAAVNTGGVKRGDSVAVIGCGGVGDAAIAGAALAGASKIIAVDIDDRKLE-WAREFGATHTVNSSGTDPVE  235 (358)
T ss_pred             hcccchhhHHHHHhccCCCCCCEEEEECCCHHHHHHHHHHHHcCCCeEEEEcCCHHHHH-HHHHcCCceEEcCCCcCHHH
Confidence            9999999998887777789999999999999999999999999995 888777776654 448999999998876543  


Q ss_pred             -HHHhcC--CccEEEEcCCCcccHHHHHhccccCCEEEEecCCCCC--cccChHHHHhCCcEEEecccC---CHHHHHHH
Q 018067          241 -MQAAMG--TMDGIIDTVSAVHPLMPLIGLLKSQGKLVLVGAPEKP--LELPAFSLLMGRKIVGGSMIG---GMKETQEM  312 (361)
Q Consensus       241 -~~~~~~--g~d~vid~~g~~~~~~~~~~~l~~~G~~v~~g~~~~~--~~~~~~~~~~~~~~i~g~~~~---~~~~~~~~  312 (361)
                       +.+.++  ++|++||++|++.++..++++++++|+++.+|.....  ..++...++.+++++.+++..   ..++++++
T Consensus       236 ~i~~~~~~~g~d~vid~~g~~~~~~~~~~~~~~~G~iv~~G~~~~~~~~~~~~~~~~~~~~~i~~~~~~~~~~~~~~~~~  315 (358)
T TIGR03451       236 AIRALTGGFGADVVIDAVGRPETYKQAFYARDLAGTVVLVGVPTPDMTLELPLLDVFGRGGALKSSWYGDCLPERDFPML  315 (358)
T ss_pred             HHHHHhCCCCCCEEEECCCCHHHHHHHHHHhccCCEEEEECCCCCCceeeccHHHHhhcCCEEEEeecCCCCcHHHHHHH
Confidence             344443  6999999999876689999999999999999986542  456777788899999988643   45789999


Q ss_pred             HHHHHcCCCcee--E-EEEecccHHHHHHHHHcCCCceEEEEE
Q 018067          313 IDFAAKHNIRAD--I-EVIPADYVNTALERLAKADVRYRFVID  352 (361)
Q Consensus       313 ~~ll~~~~~~~~--~-~~~~l~~~~~a~~~~~~~~~~gkvvi~  352 (361)
                      ++++++|++++.  + ++|||+|+++||+.+++++.. |+++.
T Consensus       316 ~~l~~~g~l~~~~~i~~~~~l~~~~~A~~~~~~~~~~-k~~~~  357 (358)
T TIGR03451       316 VDLYLQGRLPLDAFVTERIGLDDVEEAFDKMHAGDVL-RSVVE  357 (358)
T ss_pred             HHHHHcCCCCchheEEEEecHHHHHHHHHHHhCCCcc-eeEEe
Confidence            999999999753  4 899999999999999988864 77765

Members of this protein family are mycothiol-dependent formaldehyde dehydrogenase (EC 1.2.1.66). This protein is found, so far, only in the Actinobacteria (Mycobacterium sp., Streptomyces sp., Corynebacterium sp., and related species), where mycothione replaces glutathione.

>COG0604 Qor NADPH:quinone reductase and related Zn-dependent oxidoreductases [Energy production and conversion / General function prediction only]

Probab=100.00  E-value=8.5e-51  Score=372.95  Aligned_cols=309  Identities=29%  Similarity=0.418  Sum_probs=269.8

Q ss_pred             cceeeeeecCCCCCccceeeccCCCCCCeEEEEEeeeccCcchHHhHhcC-CCCCCCCCcccccccEEEEEeCCCCCCCC
Q 018067           11 KNAFGWAAKDTSGVLSPFHFSRRATGEKDVTFKVTHCGICHSDLHMIKNE-WGNTIYPIVPGHEIVGVVTEVGSKVSKFK   89 (361)
Q Consensus        11 ~~~~~~~~~~~~~~l~~~~~~~p~~~~~evlV~v~~~~i~~~D~~~~~g~-~~~~~~p~~lG~e~~G~Vv~vG~~v~~~~   89 (361)
                      |+++.+...++|+.++++++|.|.|+++||||||++++||+.|+..++|. .+...+|.++|.|++|+|+++|++|++|+
T Consensus         1 mka~~~~~~g~~~~l~~~e~~~P~p~~geVlVrV~a~gvN~~D~~~r~G~~~~~~~~P~i~G~d~aG~V~avG~~V~~~~   80 (326)
T COG0604           1 MKAVVVEEFGGPEVLKVVEVPEPEPGPGEVLVRVKAAGVNPIDVLVRQGLAPPVRPLPFIPGSEAAGVVVAVGSGVTGFK   80 (326)
T ss_pred             CeEEEEeccCCCceeEEEecCCCCCCCCeEEEEEEEeecChHHHHhccCCCCCCCCCCCcccceeEEEEEEeCCCCCCcC
Confidence            67888888888888999999999999999999999999999999999986 33446899999999999999999999999


Q ss_pred             CCCEEEeccccCCCCCCcccccCCCCCCcchhcccccccCCCCcCCCcceeEEeecCCceEECCCCCCcccccccchhhh
Q 018067           90 VGDKVGVGCMVGSCRSCDSCAIDLENYCPKVIMTYANKYHDGTITYGGYSDIMVADEHFVVRIPEGTPLDATAPLLCAGI  169 (361)
Q Consensus        90 ~GdrV~~~~~~~~c~~c~~c~~~~~~~c~~~~~~~~~~~~~~~~~~g~~a~~v~v~~~~~~~ip~~~~~~~aa~l~~~~~  169 (361)
                      +||||+... .                               ...+|+|+||+.+|++.++++|+++++++||++++.++
T Consensus        81 ~GdrV~~~~-~-------------------------------~~~~G~~AEy~~v~a~~~~~~P~~ls~~eAAal~~~~~  128 (326)
T COG0604          81 VGDRVAALG-G-------------------------------VGRDGGYAEYVVVPADWLVPLPDGLSFEEAAALPLAGL  128 (326)
T ss_pred             CCCEEEEcc-C-------------------------------CCCCCcceeEEEecHHHceeCCCCCCHHHHHHHHHHHH
Confidence            999998521 0                               01589999999999999999999999999999999999


Q ss_pred             hhhhHhhhcCCCCCCCEEEEEcC-ChHHHHHHHHHHHcCCeEEEEeCCchhHHHHHHHcCCCEEecCCCHH---HHHHhc
Q 018067          170 TVYSPLRFYGLDKPGMHVGVVGL-GGLGHVAVKFAKAMGVKVTVISTSPSKKSEAIERLGADSFLVSRDQD---EMQAAM  245 (361)
Q Consensus       170 ta~~~l~~~~~~~~g~~vlV~Ga-g~vG~~a~~la~~~g~~vi~~~~~~~~~~~~~~~~g~~~vv~~~~~~---~~~~~~  245 (361)
                      |||+++.+..++++|++|||+|+ |++|.+++|+||++|++++++++++++.+ +++++|+++++++++++   .+++++
T Consensus       129 TA~~~l~~~~~l~~g~~VLV~gaaGgVG~~aiQlAk~~G~~~v~~~~s~~k~~-~~~~lGAd~vi~y~~~~~~~~v~~~t  207 (326)
T COG0604         129 TAWLALFDRAGLKPGETVLVHGAAGGVGSAAIQLAKALGATVVAVVSSSEKLE-LLKELGADHVINYREEDFVEQVRELT  207 (326)
T ss_pred             HHHHHHHHhcCCCCCCEEEEecCCchHHHHHHHHHHHcCCcEEEEecCHHHHH-HHHhcCCCEEEcCCcccHHHHHHHHc
Confidence            99999999888999999999986 99999999999999988888888888877 77999999999988864   444555


Q ss_pred             C--CccEEEEcCCCcccHHHHHhccccCCEEEEecCCCC--CcccChHHHHhCCcEEEecccCCH------HHHHHHHHH
Q 018067          246 G--TMDGIIDTVSAVHPLMPLIGLLKSQGKLVLVGAPEK--PLELPAFSLLMGRKIVGGSMIGGM------KETQEMIDF  315 (361)
Q Consensus       246 ~--g~d~vid~~g~~~~~~~~~~~l~~~G~~v~~g~~~~--~~~~~~~~~~~~~~~i~g~~~~~~------~~~~~~~~l  315 (361)
                      +  ++|+|||++|+.. +..+++.++++|+++.+|..++  ...++...++.+++++.|......      +.+++++++
T Consensus       208 ~g~gvDvv~D~vG~~~-~~~~l~~l~~~G~lv~ig~~~g~~~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~l~~~  286 (326)
T COG0604         208 GGKGVDVVLDTVGGDT-FAASLAALAPGGRLVSIGALSGGPPVPLNLLPLLGKRLTLRGVTLGSRDPEALAEALAELFDL  286 (326)
T ss_pred             CCCCceEEEECCCHHH-HHHHHHHhccCCEEEEEecCCCCCccccCHHHHhhccEEEEEecceecchHHHHHHHHHHHHH
Confidence            4  6999999999988 8899999999999999998763  345667778888999998877644      567779999


Q ss_pred             HHcCCCceeE-EEEecccHHHHHHHHHcC-CCceEEEEEe
Q 018067          316 AAKHNIRADI-EVIPADYVNTALERLAKA-DVRYRFVIDV  353 (361)
Q Consensus       316 l~~~~~~~~~-~~~~l~~~~~a~~~~~~~-~~~gkvvi~~  353 (361)
                      +.+|++++.+ .+|||+|..++..+.... +..||+|+++
T Consensus       287 ~~~g~l~~~i~~~~~l~e~~~a~a~~~~~~~~~GKvvl~~  326 (326)
T COG0604         287 LASGKLKPVIDRVYPLAEAPAAAAHLLLERRTTGKVVLKV  326 (326)
T ss_pred             HHcCCCcceeccEechhhhHHHHHHHHcccCCcceEEEeC
Confidence            9999999999 699999966666655444 7779999974

>COG1063 Tdh Threonine dehydrogenase and related Zn-dependent dehydrogenases [Amino acid transport and metabolism / General function prediction only]

Probab=100.00  E-value=7.9e-50  Score=371.25  Aligned_cols=324  Identities=28%  Similarity=0.372  Sum_probs=262.1

Q ss_pred             CccceeeccCCCCCCeEEEEEeeeccCcchHHhHhcCCCCCCCCC-cccccccEEEEEeCCCCCCCCCCCEEEeccccCC
Q 018067           24 VLSPFHFSRRATGEKDVTFKVTHCGICHSDLHMIKNEWGNTIYPI-VPGHEIVGVVTEVGSKVSKFKVGDKVGVGCMVGS  102 (361)
Q Consensus        24 ~l~~~~~~~p~~~~~evlV~v~~~~i~~~D~~~~~g~~~~~~~p~-~lG~e~~G~Vv~vG~~v~~~~~GdrV~~~~~~~~  102 (361)
                      ..++++.+.|.+.|+||+|||.++|||+||++.+++..+....|. ++|||++|+|+++| .++.|++||||++.+.. +
T Consensus        12 ~~~~~~~~~p~~~p~~vlVkv~~~gICGSDlh~~~g~~~~~~~~~~i~GHE~~G~V~evG-~~~~~~~GdrVvv~~~~-~   89 (350)
T COG1063          12 DVRLEEPPPPIPGPGDVLIRVTATGICGSDLHIYRGGEPFVPPGDIILGHEFVGEVVEVG-VVRGFKVGDRVVVEPNI-P   89 (350)
T ss_pred             ccccccCCCCCCCCCeEEEEEEEEeEchhhhhhccCCCCCCCCCCcccCccceEEEEEec-cccCCCCCCEEEECCCc-C
Confidence            334667777788999999999999999999999999877666666 99999999999999 77789999999988765 9


Q ss_pred             CCCCcccccCCCCCCcchhcccccccCCCCcCCCcceeEEeecCCceEE-CCCCCCcccccccchhhhhhhhHhhhcCCC
Q 018067          103 CRSCDSCAIDLENYCPKVIMTYANKYHDGTITYGGYSDIMVADEHFVVR-IPEGTPLDATAPLLCAGITVYSPLRFYGLD  181 (361)
Q Consensus       103 c~~c~~c~~~~~~~c~~~~~~~~~~~~~~~~~~g~~a~~v~v~~~~~~~-ip~~~~~~~aa~l~~~~~ta~~~l~~~~~~  181 (361)
                      ||+|.+|..|.+++|.+..+.  +....+...+|+|+||+.+|.++++. +|+++ ..+++++..++.+++++.......
T Consensus        90 Cg~C~~C~~G~~~~C~~~~~~--g~~~~~~~~~G~~aEyv~vp~~~~~~~~pd~~-~~~~aal~epla~~~~~~a~~~~~  166 (350)
T COG1063          90 CGHCRYCRAGEYNLCENPGFY--GYAGLGGGIDGGFAEYVRVPADFNLAKLPDGI-DEEAAALTEPLATAYHGHAERAAV  166 (350)
T ss_pred             CCCChhHhCcCcccCCCcccc--ccccccCCCCCceEEEEEeccccCeecCCCCC-ChhhhhhcChhhhhhhhhhhccCC
Confidence            999999999999999965421  11111222689999999999755554 58888 677777888999997774333434


Q ss_pred             CCCCEEEEEcCChHHHHHHHHHHHcCC-eEEEEeCCchhHHHHHHH-cCCCEEecCCCH---HHHHHhcC--CccEEEEc
Q 018067          182 KPGMHVGVVGLGGLGHVAVKFAKAMGV-KVTVISTSPSKKSEAIER-LGADSFLVSRDQ---DEMQAAMG--TMDGIIDT  254 (361)
Q Consensus       182 ~~g~~vlV~Gag~vG~~a~~la~~~g~-~vi~~~~~~~~~~~~~~~-~g~~~vv~~~~~---~~~~~~~~--g~d~vid~  254 (361)
                      +++.+|+|+|+|++|++++++++.+|+ +|++++.+++|+ +++++ +|++.+++...+   ..+.++++  |+|++|||
T Consensus       167 ~~~~~V~V~GaGpIGLla~~~a~~~Ga~~Viv~d~~~~Rl-~~A~~~~g~~~~~~~~~~~~~~~~~~~t~g~g~D~vie~  245 (350)
T COG1063         167 RPGGTVVVVGAGPIGLLAIALAKLLGASVVIVVDRSPERL-ELAKEAGGADVVVNPSEDDAGAEILELTGGRGADVVIEA  245 (350)
T ss_pred             CCCCEEEEECCCHHHHHHHHHHHHcCCceEEEeCCCHHHH-HHHHHhCCCeEeecCccccHHHHHHHHhCCCCCCEEEEC
Confidence            666699999999999999999999998 666666666555 55566 667766666542   23445554  69999999


Q ss_pred             CCCcccHHHHHhccccCCEEEEecCCCCCc-ccChHHHHhCCcEEEeccc-CCHHHHHHHHHHHHcCCCcee---EEEEe
Q 018067          255 VSAVHPLMPLIGLLKSQGKLVLVGAPEKPL-ELPAFSLLMGRKIVGGSMI-GGMKETQEMIDFAAKHNIRAD---IEVIP  329 (361)
Q Consensus       255 ~g~~~~~~~~~~~l~~~G~~v~~g~~~~~~-~~~~~~~~~~~~~i~g~~~-~~~~~~~~~~~ll~~~~~~~~---~~~~~  329 (361)
                      +|...++..+++.++++|+++.+|...... .++...++.|++++.|+.. ....+++.+++++.+|++++.   .+.++
T Consensus       246 ~G~~~~~~~ai~~~r~gG~v~~vGv~~~~~~~~~~~~~~~kel~l~gs~~~~~~~~~~~~~~ll~~g~i~~~~lit~~~~  325 (350)
T COG1063         246 VGSPPALDQALEALRPGGTVVVVGVYGGEDIPLPAGLVVSKELTLRGSLRPSGREDFERALDLLASGKIDPEKLITHRLP  325 (350)
T ss_pred             CCCHHHHHHHHHHhcCCCEEEEEeccCCccCccCHHHHHhcccEEEeccCCCCcccHHHHHHHHHcCCCChhHceEeecc
Confidence            999888999999999999999999987665 6778889999999999965 566789999999999999876   38999


Q ss_pred             cccHHHHHHHHHcCCC-ceEEEEEe
Q 018067          330 ADYVNTALERLAKADV-RYRFVIDV  353 (361)
Q Consensus       330 l~~~~~a~~~~~~~~~-~gkvvi~~  353 (361)
                      ++++++||+.+.+.+. ..|+++.+
T Consensus       326 ~~~~~~a~~~~~~~~~~~~Kv~i~~  350 (350)
T COG1063         326 LDDAAEAYELFADRKEEAIKVVLKP  350 (350)
T ss_pred             HHHHHHHHHHHHhcCCCeEEEEecC
Confidence            9999999999988665 46888764

>TIGR02818 adh_III_F_hyde S-(hydroxymethyl)glutathione dehydrogenase/class III alcohol dehydrogenase

Probab=100.00  E-value=1.3e-49  Score=374.32  Aligned_cols=337  Identities=23%  Similarity=0.363  Sum_probs=273.3

Q ss_pred             cceeeeeecCCCCCccceeeccCCCCCCeEEEEEeeeccCcchHHhHhcCCCCCCCCCcccccccEEEEEeCCCCCCCCC
Q 018067           11 KNAFGWAAKDTSGVLSPFHFSRRATGEKDVTFKVTHCGICHSDLHMIKNEWGNTIYPIVPGHEIVGVVTEVGSKVSKFKV   90 (361)
Q Consensus        11 ~~~~~~~~~~~~~~l~~~~~~~p~~~~~evlV~v~~~~i~~~D~~~~~g~~~~~~~p~~lG~e~~G~Vv~vG~~v~~~~~   90 (361)
                      |++..+.  ..++.++++++|.|+++++||+|||+++|||++|++.+.|..+...+|.++|||++|+|+++|+++++|++
T Consensus         2 ~~a~~~~--~~~~~l~~~~~~~P~~~~~eVlI~v~a~gi~~sD~~~~~g~~~~~~~p~i~GhE~~G~V~~vG~~v~~~~~   79 (368)
T TIGR02818         2 SRAAVAW--AAGQPLKIEEVDVEMPQKGEVLVRIVATGVCHTDAFTLSGADPEGVFPVILGHEGAGIVEAVGEGVTSVKV   79 (368)
T ss_pred             ceEEEEe--cCCCCeEEEEecCCCCCCCeEEEEEEEecccHHHHHHhcCCCCCCCCCeeeccccEEEEEEECCCCccCCC
Confidence            4444443  34566888999999999999999999999999999999887655567899999999999999999999999


Q ss_pred             CCEEEeccccCCCCCCcccccCCCCCCcchhccccccc---------CCC-----CcCCCcceeEEeecCCceEECCCCC
Q 018067           91 GDKVGVGCMVGSCRSCDSCAIDLENYCPKVIMTYANKY---------HDG-----TITYGGYSDIMVADEHFVVRIPEGT  156 (361)
Q Consensus        91 GdrV~~~~~~~~c~~c~~c~~~~~~~c~~~~~~~~~~~---------~~~-----~~~~g~~a~~v~v~~~~~~~ip~~~  156 (361)
                      ||||++.+. .+||+|.+|..++++.|.+.......+.         ..|     ....|+|+||+.+|.++++++|+++
T Consensus        80 GdrV~~~~~-~~cg~C~~c~~g~~~~C~~~~~~~~~g~~~~~~~~~~~~g~~~~~~~~~G~~aey~~v~~~~~~~lP~~l  158 (368)
T TIGR02818        80 GDHVIPLYT-AECGECKFCLSGKTNLCVAVRETQGKGLMPDGTSRFSKDGQPIYHYMGCSTFSEYTVVPEISLAKINPAA  158 (368)
T ss_pred             CCEEEEcCC-CCCCCChhhhCCCcccccCcccccccccccCCccccccCCCcccccccCccceeeEEechhheEECCCCC
Confidence            999987655 4899999999999999997532111000         001     0124799999999999999999999


Q ss_pred             CcccccccchhhhhhhhHhhhcCCCCCCCEEEEEcCChHHHHHHHHHHHcCC-eEEEEeCCchhHHHHHHHcCCCEEecC
Q 018067          157 PLDATAPLLCAGITVYSPLRFYGLDKPGMHVGVVGLGGLGHVAVKFAKAMGV-KVTVISTSPSKKSEAIERLGADSFLVS  235 (361)
Q Consensus       157 ~~~~aa~l~~~~~ta~~~l~~~~~~~~g~~vlV~Gag~vG~~a~~la~~~g~-~vi~~~~~~~~~~~~~~~~g~~~vv~~  235 (361)
                      ++++++.+++++.|||+++.+...+++|++|||+|+|++|++++|+|+.+|+ +|++++++++++..+ +++|++.++++
T Consensus       159 ~~~~aa~l~~~~~ta~~a~~~~~~~~~g~~VlV~G~G~iG~~a~q~Ak~~G~~~Vi~~~~~~~~~~~a-~~~Ga~~~i~~  237 (368)
T TIGR02818       159 PLEEVCLLGCGVTTGIGAVLNTAKVEEGDTVAVFGLGGIGLSVIQGARMAKASRIIAIDINPAKFELA-KKLGATDCVNP  237 (368)
T ss_pred             CHHHhhhhcchhHHHHHHHHHhcCCCCCCEEEEECCCHHHHHHHHHHHHcCCCeEEEEcCCHHHHHHH-HHhCCCeEEcc
Confidence            9999999999999999998777778999999999999999999999999999 788888877765544 88999998887


Q ss_pred             CC--H---HHHHHhcC-CccEEEEcCCCcccHHHHHhccccC-CEEEEecCCCC--CcccChHHHHhCCcEEEecccC--
Q 018067          236 RD--Q---DEMQAAMG-TMDGIIDTVSAVHPLMPLIGLLKSQ-GKLVLVGAPEK--PLELPAFSLLMGRKIVGGSMIG--  304 (361)
Q Consensus       236 ~~--~---~~~~~~~~-g~d~vid~~g~~~~~~~~~~~l~~~-G~~v~~g~~~~--~~~~~~~~~~~~~~~i~g~~~~--  304 (361)
                      ++  .   +.+.++++ ++|++||++|++.++..++++++++ |+++.+|....  ...+....++. +..+.|+..+  
T Consensus       238 ~~~~~~~~~~v~~~~~~g~d~vid~~G~~~~~~~~~~~~~~~~G~~v~~g~~~~~~~~~~~~~~~~~-~~~~~g~~~~~~  316 (368)
T TIGR02818       238 NDYDKPIQEVIVEITDGGVDYSFECIGNVNVMRAALECCHKGWGESIIIGVAGAGQEISTRPFQLVT-GRVWRGSAFGGV  316 (368)
T ss_pred             cccchhHHHHHHHHhCCCCCEEEECCCCHHHHHHHHHHhhcCCCeEEEEeccCCCCcccccHHHHhc-cceEEEeeccCC
Confidence            63  2   23444443 7999999999877789999999886 99999997542  23444444443 4457776543  


Q ss_pred             -CHHHHHHHHHHHHcCCCcee--E-EEEecccHHHHHHHHHcCCCceEEEEEe
Q 018067          305 -GMKETQEMIDFAAKHNIRAD--I-EVIPADYVNTALERLAKADVRYRFVIDV  353 (361)
Q Consensus       305 -~~~~~~~~~~ll~~~~~~~~--~-~~~~l~~~~~a~~~~~~~~~~gkvvi~~  353 (361)
                       ...++.++++++.++++++.  + ++|+|+|+++||+.+.+++. .|+++.+
T Consensus       317 ~~~~~~~~~~~~~~~g~i~~~~~it~~~~l~~~~~A~~~~~~~~~-~k~~v~~  368 (368)
T TIGR02818       317 KGRTELPGIVEQYMKGEIALDDFVTHTMPLEDINEAFDLMHEGKS-IRTVIHY  368 (368)
T ss_pred             CcHHHHHHHHHHHHCCCCCchhheeEEecHHHHHHHHHHHhCCCc-eeEEeeC
Confidence             34678999999999998643  4 89999999999999988774 7999864

The members of this protein family show dual function. First, they remove formaldehyde, a toxic metabolite, by acting as S-(hydroxymethyl)glutathione dehydrogenase (1.1.1.284). S-(hydroxymethyl)glutathione can form spontaneously from formaldehyde and glutathione, and so this enzyme previously was designated glutathione-dependent formaldehyde dehydrogenase. These same proteins are also designated alcohol dehydrogenase (EC 1.1.1.1) of class III, for activities that do not require glutathione; they tend to show poor activity for ethanol among their various substrate alcohols.

>TIGR02819 fdhA_non_GSH formaldehyde dehydrogenase, glutathione-independent

Probab=100.00  E-value=3e-49  Score=373.50  Aligned_cols=337  Identities=20%  Similarity=0.252  Sum_probs=264.8

Q ss_pred             ccceeeeeecCCCCCccceeeccCCCC-------CCeEEEEEeeeccCcchHHhHhcCCCCCCCCCcccccccEEEEEeC
Q 018067           10 PKNAFGWAAKDTSGVLSPFHFSRRATG-------EKDVTFKVTHCGICHSDLHMIKNEWGNTIYPIVPGHEIVGVVTEVG   82 (361)
Q Consensus        10 ~~~~~~~~~~~~~~~l~~~~~~~p~~~-------~~evlV~v~~~~i~~~D~~~~~g~~~~~~~p~~lG~e~~G~Vv~vG   82 (361)
                      -|+++.+   ..++.++++++|.|+|+       ++||||||+++|||++|++.+.|..+ ..+|.++|||++|+|+++|
T Consensus         2 ~mka~v~---~~~~~~~~~e~~~P~~~~~~~~~~~~eVlVkv~a~gIcgsD~~~~~g~~~-~~~p~i~GhE~~G~V~~vG   77 (393)
T TIGR02819         2 GNRGVVY---LGPGKVEVQDIDYPKLELPDGRKCEHGVILKVVTTNICGSDQHMVRGRTT-APTGLVLGHEITGEVIEKG   77 (393)
T ss_pred             CceEEEE---ecCCceeEEeccCCcccCCCccCCCCeEEEEEEEeeecHHHHHHHCCCCC-CCCCccccceeEEEEEEEc
Confidence            4777666   34667889999999874       68999999999999999999988654 3568999999999999999


Q ss_pred             CCCCCCCCCCEEEeccccCCCCCCcccccCCCCCCcchhcc----cccccCCCCcCCCcceeEEeecCC--ceEECCCCC
Q 018067           83 SKVSKFKVGDKVGVGCMVGSCRSCDSCAIDLENYCPKVIMT----YANKYHDGTITYGGYSDIMVADEH--FVVRIPEGT  156 (361)
Q Consensus        83 ~~v~~~~~GdrV~~~~~~~~c~~c~~c~~~~~~~c~~~~~~----~~~~~~~~~~~~g~~a~~v~v~~~--~~~~ip~~~  156 (361)
                      ++|++|++||||++.+.. +|++|.+|++|++|+|.+....    +.+.... ....|+|+||+.+|..  +++++|+++
T Consensus        78 ~~V~~~~vGdrV~~~~~~-~Cg~C~~C~~g~~~~C~~~~~~~~~~~~g~~~~-~~~~G~~aey~~v~~~~~~l~~vP~~~  155 (393)
T TIGR02819        78 RDVEFIKIGDIVSVPFNI-ACGRCRNCKEGHTGVCLNVNPARAGAAYGYVDM-GGWVGGQSEYVMVPYADFNLLKFPDRD  155 (393)
T ss_pred             CccccccCCCEEEEeccc-CCCCChHHHCcCcccCcCCCCCCccceeccccc-CCCCCceEEEEEechhhCceEECCCcc
Confidence            999999999999887665 7999999999999999975321    0011010 1246999999999964  799999987


Q ss_pred             Cc----ccccccchhhhhhhhHhhhcCCCCCCCEEEEEcCChHHHHHHHHHHHcCCeEEEEeCCchhHHHHHHHcCCCEE
Q 018067          157 PL----DATAPLLCAGITVYSPLRFYGLDKPGMHVGVVGLGGLGHVAVKFAKAMGVKVTVISTSPSKKSEAIERLGADSF  232 (361)
Q Consensus       157 ~~----~~aa~l~~~~~ta~~~l~~~~~~~~g~~vlV~Gag~vG~~a~~la~~~g~~vi~~~~~~~~~~~~~~~~g~~~v  232 (361)
                      +.    .+++.+.+++.++|+++.+ ..+++|++|||.|+|++|++++|+|+.+|++++++.+..+.+.++++++|++.+
T Consensus       156 ~~~~~~~~~a~l~~~~~ta~~a~~~-~~~~~g~~VlV~G~G~iG~~aiqlAk~~Ga~~vi~~d~~~~r~~~a~~~Ga~~v  234 (393)
T TIGR02819       156 QALEKIRDLTMLSDIFPTGYHGAVT-AGVGPGSTVYIAGAGPVGLAAAASAQLLGAAVVIVGDLNPARLAQARSFGCETV  234 (393)
T ss_pred             cccccccceeeeccHHHHHHHHHHh-cCCCCCCEEEEECCCHHHHHHHHHHHHcCCceEEEeCCCHHHHHHHHHcCCeEE
Confidence            54    3467788889999999875 568999999999899999999999999999866655545555677789999754


Q ss_pred             ecCCCH---HHHHHhcC--CccEEEEcCCCc--------------ccHHHHHhccccCCEEEEecCCC-CC---------
Q 018067          233 LVSRDQ---DEMQAAMG--TMDGIIDTVSAV--------------HPLMPLIGLLKSQGKLVLVGAPE-KP---------  283 (361)
Q Consensus       233 v~~~~~---~~~~~~~~--g~d~vid~~g~~--------------~~~~~~~~~l~~~G~~v~~g~~~-~~---------  283 (361)
                      ....+.   +.+.++++  ++|++||++|.+              .++..++++++++|+++.+|... +.         
T Consensus       235 ~~~~~~~~~~~v~~~~~~~g~Dvvid~~G~~~~~~~~~~~~~~~~~~~~~~~~~~~~~G~i~~~G~~~~~~~~~~~~~~~  314 (393)
T TIGR02819       235 DLSKDATLPEQIEQILGEPEVDCAVDCVGFEARGHGHDGKKEAPATVLNSLMEVTRVGGAIGIPGLYVTEDPGAVDAAAK  314 (393)
T ss_pred             ecCCcccHHHHHHHHcCCCCCcEEEECCCCccccccccccccchHHHHHHHHHHhhCCCEEEEeeecCCccccccccccc
Confidence            332322   33445543  699999999986              36999999999999999999852 11         


Q ss_pred             ---cccChHHHHhCCcEEEecccCCHHHHHHHHHHHHcCCCcee---E-EEEecccHHHHHHHHHcCCCceEEEEEeC
Q 018067          284 ---LELPAFSLLMGRKIVGGSMIGGMKETQEMIDFAAKHNIRAD---I-EVIPADYVNTALERLAKADVRYRFVIDVA  354 (361)
Q Consensus       284 ---~~~~~~~~~~~~~~i~g~~~~~~~~~~~~~~ll~~~~~~~~---~-~~~~l~~~~~a~~~~~~~~~~gkvvi~~~  354 (361)
                         ..+....++.+++++.++.....+.+.++++++.+|++++.   . ++|||+|+++||+.+.+++ .+|+++.++
T Consensus       315 ~~~~~i~~~~~~~~~~~i~g~~~~~~~~~~~~~~~~~~g~i~~~~~i~~~~~~l~~~~~a~~~~~~~~-~~Kvvi~~~  391 (393)
T TIGR02819       315 TGSLSIRFGLGWAKSHSFHTGQTPVMKYNRNLMQAILHDRVQIAKAVNVTVISLDDAPEGYAEFDAGA-AKKFVIDPH  391 (393)
T ss_pred             ccccccchHHhhccCceEEeccCChhhhHHHHHHHHHcCCCCHHHceecceecHHHHHHHHHHHhhCC-ceEEEEeCC
Confidence               12334455677888887654433445789999999998752   3 6899999999999999876 499999874

Members of this family represent a distinct clade within the larger family of zinc-dependent dehydrogenases of medium chain alcohols, a family that also includes the so-called glutathione-dependent formaldehyde dehydrogenase. Members of this protein family have a tightly bound NAD that can act as a true cofactor, rather than a cosubstrate in dehydrogenase reactions, in dismutase reactions for some aldehydes. The name given to this family, however, is formaldehyde dehydrogenase, glutathione-independent.

>cd08301 alcohol_DH_plants Plant alcohol dehydrogenase

Probab=100.00  E-value=6.9e-49  Score=369.92  Aligned_cols=336  Identities=22%  Similarity=0.387  Sum_probs=277.0

Q ss_pred             ccceeeeeecCCCCCccceeeccCCCCCCeEEEEEeeeccCcchHHhHhcCCCCCCCCCcccccccEEEEEeCCCCCCCC
Q 018067           10 PKNAFGWAAKDTSGVLSPFHFSRRATGEKDVTFKVTHCGICHSDLHMIKNEWGNTIYPIVPGHEIVGVVTEVGSKVSKFK   89 (361)
Q Consensus        10 ~~~~~~~~~~~~~~~l~~~~~~~p~~~~~evlV~v~~~~i~~~D~~~~~g~~~~~~~p~~lG~e~~G~Vv~vG~~v~~~~   89 (361)
                      +|+++.+..  .++.+++++++.|+++++||+|||.+++||++|++.++|..+...+|.++|||++|+|+++|+++++|+
T Consensus         2 ~~ka~~~~~--~~~~~~l~~~~~p~~~~~evlIkv~a~gi~~~D~~~~~g~~~~~~~p~i~G~e~~G~V~~vG~~v~~~~   79 (369)
T cd08301           2 TCKAAVAWE--AGKPLVIEEVEVAPPQAMEVRIKILHTSLCHTDVYFWEAKGQTPLFPRILGHEAAGIVESVGEGVTDLK   79 (369)
T ss_pred             ccEEEEEec--CCCCcEEEEeeCCCCCCCeEEEEEEEEeeCchhHHHhcCCCCCCCCCcccccccceEEEEeCCCCCccc
Confidence            566666544  445588999999999999999999999999999999998766567799999999999999999999999


Q ss_pred             CCCEEEeccccCCCCCCcccccCCCCCCcchhccc-ccccC--------------CCCcCCCcceeEEeecCCceEECCC
Q 018067           90 VGDKVGVGCMVGSCRSCDSCAIDLENYCPKVIMTY-ANKYH--------------DGTITYGGYSDIMVADEHFVVRIPE  154 (361)
Q Consensus        90 ~GdrV~~~~~~~~c~~c~~c~~~~~~~c~~~~~~~-~~~~~--------------~~~~~~g~~a~~v~v~~~~~~~ip~  154 (361)
                      +||||++.+ ..+|++|.+|.++.++.|.++.... .+...              ......|+|+||+.++...++++|+
T Consensus        80 ~GdrV~~~~-~~~c~~c~~c~~g~~~~c~~~~~~~~~g~~~~~~~~~~~~~g~~~~~~~~~G~~aey~~v~~~~~~~iP~  158 (369)
T cd08301          80 PGDHVLPVF-TGECKECRHCKSEKSNMCDLLRINTDRGVMINDGKSRFSINGKPIYHFVGTSTFSEYTVVHVGCVAKINP  158 (369)
T ss_pred             cCCEEEEcc-CCCCCCCchhcCCCcccCcCcccccccccccCCCccccccCCcceeeeeccccceeEEEEecccEEECCC
Confidence            999998755 4589999999999999999864221 01000              0011358999999999999999999


Q ss_pred             CCCcccccccchhhhhhhhHhhhcCCCCCCCEEEEEcCChHHHHHHHHHHHcCC-eEEEEeCCchhHHHHHHHcCCCEEe
Q 018067          155 GTPLDATAPLLCAGITVYSPLRFYGLDKPGMHVGVVGLGGLGHVAVKFAKAMGV-KVTVISTSPSKKSEAIERLGADSFL  233 (361)
Q Consensus       155 ~~~~~~aa~l~~~~~ta~~~l~~~~~~~~g~~vlV~Gag~vG~~a~~la~~~g~-~vi~~~~~~~~~~~~~~~~g~~~vv  233 (361)
                      ++++++++.+++.+.|+|+++.....+++|++|||+|+|++|++++|+|+.+|+ +|+++++++++++.+ +++|++.++
T Consensus       159 ~~~~~~aa~~~~~~~ta~~~~~~~~~~~~g~~VlV~G~g~vG~~a~q~ak~~G~~~vi~~~~~~~~~~~~-~~~Ga~~~i  237 (369)
T cd08301         159 EAPLDKVCLLSCGVSTGLGAAWNVAKVKKGSTVAIFGLGAVGLAVAEGARIRGASRIIGVDLNPSKFEQA-KKFGVTEFV  237 (369)
T ss_pred             CCCHHHhhhhcchhhHHHHHHHhhcCCCCCCEEEEECCCHHHHHHHHHHHHcCCCeEEEEcCCHHHHHHH-HHcCCceEE
Confidence            999999999999999999988777788999999999999999999999999999 799888888776555 889999888


Q ss_pred             cCCC--H---HHHHHhcC-CccEEEEcCCCcccHHHHHhccccC-CEEEEecCCCC--CcccChHHHHhCCcEEEecccC
Q 018067          234 VSRD--Q---DEMQAAMG-TMDGIIDTVSAVHPLMPLIGLLKSQ-GKLVLVGAPEK--PLELPAFSLLMGRKIVGGSMIG  304 (361)
Q Consensus       234 ~~~~--~---~~~~~~~~-g~d~vid~~g~~~~~~~~~~~l~~~-G~~v~~g~~~~--~~~~~~~~~~~~~~~i~g~~~~  304 (361)
                      ++.+  +   +.+.++++ ++|++||++|....+..++++++++ |+++.+|....  .+.++...++ +++++.|+...
T Consensus       238 ~~~~~~~~~~~~v~~~~~~~~d~vid~~G~~~~~~~~~~~~~~~~g~~v~~g~~~~~~~~~~~~~~~~-~~~~i~g~~~~  316 (369)
T cd08301         238 NPKDHDKPVQEVIAEMTGGGVDYSFECTGNIDAMISAFECVHDGWGVTVLLGVPHKDAVFSTHPMNLL-NGRTLKGTLFG  316 (369)
T ss_pred             cccccchhHHHHHHHHhCCCCCEEEECCCChHHHHHHHHHhhcCCCEEEEECcCCCCcccccCHHHHh-cCCeEEEEecC
Confidence            8764  2   22334443 7999999999877688999999996 99999998653  2445544444 68999998654


Q ss_pred             C---HHHHHHHHHHHHcCCCcee--E-EEEecccHHHHHHHHHcCCCceEEEE
Q 018067          305 G---MKETQEMIDFAAKHNIRAD--I-EVIPADYVNTALERLAKADVRYRFVI  351 (361)
Q Consensus       305 ~---~~~~~~~~~ll~~~~~~~~--~-~~~~l~~~~~a~~~~~~~~~~gkvvi  351 (361)
                      +   ..+++++++++.+++++..  + ++|+|+|+++||+.+++++. .|+++
T Consensus       317 ~~~~~~~~~~~~~~~~~g~~~~~~~i~~~~~l~~~~~A~~~~~~~~~-~k~~~  368 (369)
T cd08301         317 GYKPKTDLPNLVEKYMKKELELEKFITHELPFSEINKAFDLLLKGEC-LRCIL  368 (369)
T ss_pred             CCChHHHHHHHHHHHHcCCCCcHHheeeeecHHHHHHHHHHHHCCCc-eeEEe
Confidence            3   3578999999999988753  3 89999999999999999886 58886

NAD(P)(H)-dependent oxidoreductases are the major enzymes in the interconversion of alcohols and aldehydes or ketones. Alcohol dehydrogenase in the liver converts ethanol and NAD+ to acetaldehyde and NADH, while in yeast and some other microorganisms ADH catalyzes the conversion acetaldehyde to ethanol in alcoholic fermentation. There are 7 vertebrate ADH 7 classes, 6 of which have been identified in humans. Class III, glutathione-dependent formaldehyde dehydrogenase, has been identified as the primordial form and exists in diverse species, including plants, micro-organisms, vertebrates, and invertebrates. Class I, typified by liver dehydrogenase, is an evolving form. Gene duplication and functional specialization of ADH into ADH classes and subclasses created numerous forms in vertebrates. For example, the A, B and C (formerly alpha, beta, gamma) human class I subunits have high overall structural similarity, but differ in the

>cd08277 liver_alcohol_DH_like Liver alcohol dehydrogenase

Probab=100.00  E-value=1.6e-48  Score=366.83  Aligned_cols=335  Identities=25%  Similarity=0.402  Sum_probs=274.8

Q ss_pred             ccceeeeeecCCCCCccceeeccCCCCCCeEEEEEeeeccCcchHHhHhcCCCCCCCCCcccccccEEEEEeCCCCCCCC
Q 018067           10 PKNAFGWAAKDTSGVLSPFHFSRRATGEKDVTFKVTHCGICHSDLHMIKNEWGNTIYPIVPGHEIVGVVTEVGSKVSKFK   89 (361)
Q Consensus        10 ~~~~~~~~~~~~~~~l~~~~~~~p~~~~~evlV~v~~~~i~~~D~~~~~g~~~~~~~p~~lG~e~~G~Vv~vG~~v~~~~   89 (361)
                      +|+++.+  .+.++.++++++|.|.++++||+|||+++++|++|++.+.|..+ ..+|.++|||++|+|+++|+++++|+
T Consensus         2 ~~ka~~~--~~~~~~~~~~~~~~p~~~~~evlVkv~~~gi~~sD~~~~~g~~~-~~~p~i~G~e~~G~V~~vG~~v~~~~   78 (365)
T cd08277           2 KCKAAVA--WEAGKPLVIEEIEVAPPKANEVRIKMLATSVCHTDILAIEGFKA-TLFPVILGHEGAGIVESVGEGVTNLK   78 (365)
T ss_pred             ccEEEEE--ccCCCCcEEEEEECCCCCCCEEEEEEEEEeechhhHHHhcCCCC-CCCCeecccceeEEEEeeCCCCccCC
Confidence            3455444  33445688999999999999999999999999999999988665 46789999999999999999999999


Q ss_pred             CCCEEEeccccCCCCCCcccccCCCCCCcchhcccccccCCC-------------CcCCCcceeEEeecCCceEECCCCC
Q 018067           90 VGDKVGVGCMVGSCRSCDSCAIDLENYCPKVIMTYANKYHDG-------------TITYGGYSDIMVADEHFVVRIPEGT  156 (361)
Q Consensus        90 ~GdrV~~~~~~~~c~~c~~c~~~~~~~c~~~~~~~~~~~~~~-------------~~~~g~~a~~v~v~~~~~~~ip~~~  156 (361)
                      +||||++.+. .+|++|.+|.+++++.|++..+...+....+             ....|+|+||+.++.++++++|+++
T Consensus        79 ~GdrV~~~~~-~~c~~c~~c~~g~~~~c~~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~g~~ae~~~v~~~~~~~lP~~l  157 (365)
T cd08277          79 PGDKVIPLFI-GQCGECSNCRSGKTNLCQKYRANESGLMPDGTSRFTCKGKKIYHFLGTSTFSQYTVVDENYVAKIDPAA  157 (365)
T ss_pred             CCCEEEECCC-CCCCCCchhcCcCcccCcCccccccccccCCccccccCCcccccccccccceeeEEEchhheEECCCCC
Confidence            9999976544 5999999999999999998643322221111             1135899999999999999999999


Q ss_pred             CcccccccchhhhhhhhHhhhcCCCCCCCEEEEEcCChHHHHHHHHHHHcCC-eEEEEeCCchhHHHHHHHcCCCEEecC
Q 018067          157 PLDATAPLLCAGITVYSPLRFYGLDKPGMHVGVVGLGGLGHVAVKFAKAMGV-KVTVISTSPSKKSEAIERLGADSFLVS  235 (361)
Q Consensus       157 ~~~~aa~l~~~~~ta~~~l~~~~~~~~g~~vlV~Gag~vG~~a~~la~~~g~-~vi~~~~~~~~~~~~~~~~g~~~vv~~  235 (361)
                      ++++++.+++++.|||+++...+.+++|++|||+|+|++|++++|+|+.+|+ +|+++++++++++.+ +++|++++++.
T Consensus       158 ~~~~aa~l~~~~~ta~~~~~~~~~~~~g~~vlV~G~g~vG~~~~~~a~~~G~~~Vi~~~~~~~~~~~~-~~~ga~~~i~~  236 (365)
T cd08277         158 PLEHVCLLGCGFSTGYGAAWNTAKVEPGSTVAVFGLGAVGLSAIMGAKIAGASRIIGVDINEDKFEKA-KEFGATDFINP  236 (365)
T ss_pred             CHHHhhHhcchhHHHHHHHHhhcCCCCCCEEEEECCCHHHHHHHHHHHHcCCCeEEEEeCCHHHHHHH-HHcCCCcEecc
Confidence            9999999999999999988777778999999999999999999999999999 688888877766555 88999988887


Q ss_pred             CCH-----HHHHHhc-CCccEEEEcCCCcccHHHHHhccccC-CEEEEecCCCC-CcccChHHHHhCCcEEEecccCC--
Q 018067          236 RDQ-----DEMQAAM-GTMDGIIDTVSAVHPLMPLIGLLKSQ-GKLVLVGAPEK-PLELPAFSLLMGRKIVGGSMIGG--  305 (361)
Q Consensus       236 ~~~-----~~~~~~~-~g~d~vid~~g~~~~~~~~~~~l~~~-G~~v~~g~~~~-~~~~~~~~~~~~~~~i~g~~~~~--  305 (361)
                      .+.     +.+.+++ +++|++||++|+...+..++++++++ |+++.+|...+ ...++...++. ++++.|++.+.  
T Consensus       237 ~~~~~~~~~~~~~~~~~g~d~vid~~g~~~~~~~~~~~l~~~~G~~v~~g~~~~~~~~~~~~~~~~-~~~i~g~~~~~~~  315 (365)
T cd08277         237 KDSDKPVSEVIREMTGGGVDYSFECTGNADLMNEALESTKLGWGVSVVVGVPPGAELSIRPFQLIL-GRTWKGSFFGGFK  315 (365)
T ss_pred             ccccchHHHHHHHHhCCCCCEEEECCCChHHHHHHHHhcccCCCEEEEEcCCCccccccCHhHHhh-CCEEEeeecCCCC
Confidence            642     3344444 47999999999876688999999885 99999998643 34556656554 78998887654  


Q ss_pred             -HHHHHHHHHHHHcCCCce--eE-EEEecccHHHHHHHHHcCCCceEEEE
Q 018067          306 -MKETQEMIDFAAKHNIRA--DI-EVIPADYVNTALERLAKADVRYRFVI  351 (361)
Q Consensus       306 -~~~~~~~~~ll~~~~~~~--~~-~~~~l~~~~~a~~~~~~~~~~gkvvi  351 (361)
                       ..+++++++++.+++++.  .+ ++|+|+|+++||+.+++++ ..|+++
T Consensus       316 ~~~~~~~~~~~~~~~~~~~~~~i~~~~~l~~~~~A~~~~~~~~-~~k~~i  364 (365)
T cd08277         316 SRSDVPKLVSKYMNKKFDLDELITHVLPFEEINKGFDLMKSGE-CIRTVI  364 (365)
T ss_pred             hHHHHHHHHHHHHCCCcChhHheeeEEchhhHHHHHHHHHCCC-CceEee
Confidence             357899999999998764  34 8999999999999999887 468886

NAD(P)(H)-dependent oxidoreductases are the major enzymes in the interconversion of alcohols and aldehydes, or ketones. Alcohol dehydrogenase in the liver converts ethanol and NAD+ to acetaldehyde and NADH, while in yeast and some other microorganisms ADH catalyzes the conversion acetaldehyde to ethanol in alcoholic fermentation. There are 7 vertebrate ADH 7 classes, 6 of which have been identified in humans. Class III, glutathione-dependent formaldehyde dehydrogenase, has been identified as the primordial form and exists in diverse species, including plants, micro-organisms, vertebrates, and invertebrates. Class I, typified by liver dehydrogenase, is an evolving form. Gene duplication and functional specialization of ADH into ADH classes and subclasses created numerous forms in vertebrates. For example, the A, B and C (formerly alpha, beta, gamma) human class I subunits have high overall structural similarity, but differ i

>TIGR03201 dearomat_had 6-hydroxycyclohex-1-ene-1-carbonyl-CoA dehydrogenase

Probab=100.00  E-value=8.5e-49  Score=366.54  Aligned_cols=318  Identities=25%  Similarity=0.360  Sum_probs=273.4

Q ss_pred             ccceeeccCCCCCCeEEEEEeeeccCcchHHhHhcC-CCCCCCCCcccccccEEEEEeCCCCCCCCCCCEEEeccccCCC
Q 018067           25 LSPFHFSRRATGEKDVTFKVTHCGICHSDLHMIKNE-WGNTIYPIVPGHEIVGVVTEVGSKVSKFKVGDKVGVGCMVGSC  103 (361)
Q Consensus        25 l~~~~~~~p~~~~~evlV~v~~~~i~~~D~~~~~g~-~~~~~~p~~lG~e~~G~Vv~vG~~v~~~~~GdrV~~~~~~~~c  103 (361)
                      ++++++|.|.++++||+|||.++|+|++|++.+.+. .....+|.++|||++|+|+++|+++..+ +||||++.+.. +|
T Consensus        11 ~~~~~~p~P~~~~~evlVrv~~~gic~sD~~~~~~~~~~~~~~p~i~GhE~~G~V~~vG~~v~~~-~GdrV~~~~~~-~c   88 (349)
T TIGR03201        11 MVKTRVEIPELGAGDVVVKVAGCGVCHTDLSYYYMGVRTNHALPLALGHEISGRVIQAGAGAASW-IGKAVIVPAVI-PC   88 (349)
T ss_pred             ceEEeccCCCCCCCeEEEEEEEEeecccchHHHcCCCCccCCCCeeccccceEEEEEeCCCcCCC-CCCEEEECCCC-CC
Confidence            788899999999999999999999999999987433 3233668899999999999999999877 99999887666 99


Q ss_pred             CCCcccccCCCCCCcchhcccccccCCCCcCCCcceeEEeecCCceEECCC------CCCcccccccchhhhhhhhHhhh
Q 018067          104 RSCDSCAIDLENYCPKVIMTYANKYHDGTITYGGYSDIMVADEHFVVRIPE------GTPLDATAPLLCAGITVYSPLRF  177 (361)
Q Consensus       104 ~~c~~c~~~~~~~c~~~~~~~~~~~~~~~~~~g~~a~~v~v~~~~~~~ip~------~~~~~~aa~l~~~~~ta~~~l~~  177 (361)
                      ++|.+|.++.++.|.+..+.       |....|+|+||+.++.+.++++|+      ++++++++.+++++.++|+++.+
T Consensus        89 g~c~~c~~g~~~~c~~~~~~-------g~~~~G~~ae~~~v~~~~~~~ip~~~~~~~~~~~~~~a~~~~~~~ta~~a~~~  161 (349)
T TIGR03201        89 GECELCKTGRGTICRAQKMP-------GNDMQGGFASHIVVPAKGLCVVDEARLAAAGLPLEHVSVVADAVTTPYQAAVQ  161 (349)
T ss_pred             CCChhhhCcCcccCCCCCcc-------CcCCCCcccceEEechHHeEECCcccccccCCCHHHhhhhcchHHHHHHHHHh
Confidence            99999999999999864321       333579999999999999999999      89999999999999999999876


Q ss_pred             cCCCCCCCEEEEEcCChHHHHHHHHHHHcCCeEEEEeCCchhHHHHHHHcCCCEEecCCCH---HH---HHHhcC--Ccc
Q 018067          178 YGLDKPGMHVGVVGLGGLGHVAVKFAKAMGVKVTVISTSPSKKSEAIERLGADSFLVSRDQ---DE---MQAAMG--TMD  249 (361)
Q Consensus       178 ~~~~~~g~~vlV~Gag~vG~~a~~la~~~g~~vi~~~~~~~~~~~~~~~~g~~~vv~~~~~---~~---~~~~~~--g~d  249 (361)
                       ..+++|++|+|+|+|++|++++|+|+.+|++|++++++++++..+ +++|++.++++.+.   +.   +.++++  |+|
T Consensus       162 -~~~~~g~~VlV~G~G~vG~~a~~~a~~~G~~vi~~~~~~~~~~~~-~~~Ga~~~i~~~~~~~~~~~~~~~~~t~~~g~d  239 (349)
T TIGR03201       162 -AGLKKGDLVIVIGAGGVGGYMVQTAKAMGAAVVAIDIDPEKLEMM-KGFGADLTLNPKDKSAREVKKLIKAFAKARGLR  239 (349)
T ss_pred             -cCCCCCCEEEEECCCHHHHHHHHHHHHcCCeEEEEcCCHHHHHHH-HHhCCceEecCccccHHHHHHHHHhhcccCCCC
Confidence             558999999999999999999999999999999988888776555 88999988887653   22   333443  565


Q ss_pred             ----EEEEcCCCcccHHHHHhccccCCEEEEecCCCCCcccChHHHHhCCcEEEecccCCHHHHHHHHHHHHcCCCce--
Q 018067          250 ----GIIDTVSAVHPLMPLIGLLKSQGKLVLVGAPEKPLELPAFSLLMGRKIVGGSMIGGMKETQEMIDFAAKHNIRA--  323 (361)
Q Consensus       250 ----~vid~~g~~~~~~~~~~~l~~~G~~v~~g~~~~~~~~~~~~~~~~~~~i~g~~~~~~~~~~~~~~ll~~~~~~~--  323 (361)
                          ++|||+|+..++..++++++++|+++.+|.......++...++.+++++.|++..+.++++++++++++|++++  
T Consensus       240 ~~~d~v~d~~g~~~~~~~~~~~l~~~G~iv~~G~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~i~~g~i~~~~  319 (349)
T TIGR03201       240 STGWKIFECSGSKPGQESALSLLSHGGTLVVVGYTMAKTEYRLSNLMAFHARALGNWGCPPDRYPAALDLVLDGKIQLGP  319 (349)
T ss_pred             CCcCEEEECCCChHHHHHHHHHHhcCCeEEEECcCCCCcccCHHHHhhcccEEEEEecCCHHHHHHHHHHHHcCCCCccc
Confidence                89999999877888999999999999999876556677777888899999998877889999999999999875  


Q ss_pred             eEEEEecccHHHHHHHHHcCCCceEEEEEe
Q 018067          324 DIEVIPADYVNTALERLAKADVRYRFVIDV  353 (361)
Q Consensus       324 ~~~~~~l~~~~~a~~~~~~~~~~gkvvi~~  353 (361)
                      .++.|+|+++++||+.+++++..||+++++
T Consensus       320 ~i~~~~l~~~~~A~~~~~~~~~~~k~~~~~  349 (349)
T TIGR03201       320 FVERRPLDQIEHVFAAAHHHKLKRRAILTP  349 (349)
T ss_pred             ceEEecHHHHHHHHHHHHcCCccceEEecC
Confidence            347899999999999999999889998853

Members of this protein family are 6-hydroxycyclohex-1-ene-1-carbonyl-CoA dehydrogenase, an enzyme in the anaerobic metabolism of aromatic enzymes by way of benzoyl-CoA, as seen in Thauera aromatica, Geobacter metallireducens, and Azoarcus sp. The experimentally characterized form from T. aromatica uses only NAD+, not NADP+. Note that Rhodopseudomonas palustris uses a different pathway to perform a similar degradation of benzoyl-CoA to 3-hydroxpimelyl-CoA.

>cd08300 alcohol_DH_class_III class III alcohol dehydrogenases

Probab=100.00  E-value=1.8e-48  Score=366.80  Aligned_cols=337  Identities=24%  Similarity=0.367  Sum_probs=273.3

Q ss_pred             ccceeeeeecCCCCCccceeeccCCCCCCeEEEEEeeeccCcchHHhHhcCCCCCCCCCcccccccEEEEEeCCCCCCCC
Q 018067           10 PKNAFGWAAKDTSGVLSPFHFSRRATGEKDVTFKVTHCGICHSDLHMIKNEWGNTIYPIVPGHEIVGVVTEVGSKVSKFK   89 (361)
Q Consensus        10 ~~~~~~~~~~~~~~~l~~~~~~~p~~~~~evlV~v~~~~i~~~D~~~~~g~~~~~~~p~~lG~e~~G~Vv~vG~~v~~~~   89 (361)
                      .|++..+..  .++.++++++|.|.|+++||+|||+++|||++|++.+.|.++...+|.++|||++|+|+++|+++++|+
T Consensus         2 ~~~a~~~~~--~~~~~~~~~~~~P~~~~~eVlIrv~a~gi~~~D~~~~~g~~~~~~~p~v~G~E~~G~V~~vG~~v~~~~   79 (368)
T cd08300           2 TCKAAVAWE--AGKPLSIEEVEVAPPKAGEVRIKILATGVCHTDAYTLSGADPEGLFPVILGHEGAGIVESVGEGVTSVK   79 (368)
T ss_pred             cceEEEEec--CCCCcEEEEeecCCCCCCEEEEEEEEEEechhhHHHhcCCCccCCCCceeccceeEEEEEeCCCCccCC
Confidence            456555533  455688899999999999999999999999999999988766557899999999999999999999999


Q ss_pred             CCCEEEeccccCCCCCCcccccCCCCCCcchhcccc-cccCC-------------CCcCCCcceeEEeecCCceEECCCC
Q 018067           90 VGDKVGVGCMVGSCRSCDSCAIDLENYCPKVIMTYA-NKYHD-------------GTITYGGYSDIMVADEHFVVRIPEG  155 (361)
Q Consensus        90 ~GdrV~~~~~~~~c~~c~~c~~~~~~~c~~~~~~~~-~~~~~-------------~~~~~g~~a~~v~v~~~~~~~ip~~  155 (361)
                      +||||++.+. .+|++|.+|.+++++.|.+...... +....             .....|+|+||+.++.+.++++|++
T Consensus        80 vGdrV~~~~~-~~cg~C~~c~~g~~~~c~~~~~~~~~g~~~~g~~~~~~~g~~~~~~~~~G~~aey~~v~~~~~~~iP~~  158 (368)
T cd08300          80 PGDHVIPLYT-PECGECKFCKSGKTNLCQKIRATQGKGLMPDGTSRFSCKGKPIYHFMGTSTFSEYTVVAEISVAKINPE  158 (368)
T ss_pred             CCCEEEEcCC-CCCCCChhhcCCCcCcCCCccccccccccCCCccccccCCcccccccccccceeEEEEchhceEeCCCC
Confidence            9999987644 5999999999999999987532110 00000             0112479999999999999999999


Q ss_pred             CCcccccccchhhhhhhhHhhhcCCCCCCCEEEEEcCChHHHHHHHHHHHcCC-eEEEEeCCchhHHHHHHHcCCCEEec
Q 018067          156 TPLDATAPLLCAGITVYSPLRFYGLDKPGMHVGVVGLGGLGHVAVKFAKAMGV-KVTVISTSPSKKSEAIERLGADSFLV  234 (361)
Q Consensus       156 ~~~~~aa~l~~~~~ta~~~l~~~~~~~~g~~vlV~Gag~vG~~a~~la~~~g~-~vi~~~~~~~~~~~~~~~~g~~~vv~  234 (361)
                      +++++|+.+++++.+||+++.....+++|++|||+|+|++|++++|+|+.+|+ +|++++++++++..+ +++|++++++
T Consensus       159 l~~~~aa~l~~~~~ta~~a~~~~~~~~~g~~VlV~G~G~vG~~a~~~ak~~G~~~vi~~~~~~~~~~~~-~~lGa~~~i~  237 (368)
T cd08300         159 APLDKVCLLGCGVTTGYGAVLNTAKVEPGSTVAVFGLGAVGLAVIQGAKAAGASRIIGIDINPDKFELA-KKFGATDCVN  237 (368)
T ss_pred             CChhhhhhhccchhhhHHHHHHhcCCCCCCEEEEECCCHHHHHHHHHHHHcCCCeEEEEeCCHHHHHHH-HHcCCCEEEc
Confidence            99999999999999999998777778999999999999999999999999999 688888888776554 8899999998


Q ss_pred             CCCH-----HHHHHhcC-CccEEEEcCCCcccHHHHHhccccC-CEEEEecCCCC--CcccChHHHHhCCcEEEecccC-
Q 018067          235 SRDQ-----DEMQAAMG-TMDGIIDTVSAVHPLMPLIGLLKSQ-GKLVLVGAPEK--PLELPAFSLLMGRKIVGGSMIG-  304 (361)
Q Consensus       235 ~~~~-----~~~~~~~~-g~d~vid~~g~~~~~~~~~~~l~~~-G~~v~~g~~~~--~~~~~~~~~~~~~~~i~g~~~~-  304 (361)
                      +++.     +.+.++++ ++|+|||++|+...+..++++++++ |+++.+|....  ...+....+. ++.++.++... 
T Consensus       238 ~~~~~~~~~~~v~~~~~~g~d~vid~~g~~~~~~~a~~~l~~~~G~~v~~g~~~~~~~~~~~~~~~~-~~~~~~g~~~~~  316 (368)
T cd08300         238 PKDHDKPIQQVLVEMTDGGVDYTFECIGNVKVMRAALEACHKGWGTSVIIGVAAAGQEISTRPFQLV-TGRVWKGTAFGG  316 (368)
T ss_pred             ccccchHHHHHHHHHhCCCCcEEEECCCChHHHHHHHHhhccCCCeEEEEccCCCCCccccCHHHHh-hcCeEEEEEecc
Confidence            7653     23334444 7999999999876689999999886 99999997642  2334444443 33466665432 


Q ss_pred             --CHHHHHHHHHHHHcCCCcee--E-EEEecccHHHHHHHHHcCCCceEEEEE
Q 018067          305 --GMKETQEMIDFAAKHNIRAD--I-EVIPADYVNTALERLAKADVRYRFVID  352 (361)
Q Consensus       305 --~~~~~~~~~~ll~~~~~~~~--~-~~~~l~~~~~a~~~~~~~~~~gkvvi~  352 (361)
                        ..++++++++++.++++++.  + ++|+|+|+++||+.+.+++. .|++++
T Consensus       317 ~~~~~~~~~~~~~~~~g~l~~~~~i~~~~~le~~~~A~~~~~~~~~-~k~~~~  368 (368)
T cd08300         317 WKSRSQVPKLVEDYMKGKIKVDEFITHTMPLDEINEAFDLMHAGKS-IRTVVK  368 (368)
T ss_pred             cCcHHHHHHHHHHHHcCCCChhhceeeeEcHHHHHHHHHHHhCCCC-ceeeeC
Confidence              35678999999999999853  4 89999999999999988875 688874

Members identified as glutathione-dependent formaldehyde dehydrogenase(FDH), a member of the zinc dependent/medium chain alcohol dehydrogenase family. FDH converts formaldehyde and NAD(P) to formate and NAD(P)H. The initial step in this process the spontaneous formation of a S-(hydroxymethyl)glutathione adduct from formaldehyde and glutathione, followed by FDH-mediated oxidation (and detoxification) of the adduct to S-formylglutathione. MDH family uses NAD(H) as a cofactor in the interconversion of alcohols and aldehydes or ketones. Like many zinc-dependent alcohol dehydrogenases (ADH) of the medium chain alcohol dehydrogenase/reductase family (MDR), these FDHs form dimers, with 4 zinc ions per dimer. The medium chain alcohol dehydrogenase family (MDR) have a NAD(P)(H)-binding domain in a Rossmann fold of a beta-alpha form. The N-terminal region typically has an all-beta catalytic domain. These proteins typically form dim

>cd08230 glucose_DH Glucose dehydrogenase

Probab=100.00  E-value=1.4e-48  Score=365.88  Aligned_cols=330  Identities=22%  Similarity=0.317  Sum_probs=260.2

Q ss_pred             cceeeeeecCCCCCccceeeccCCCCCCeEEEEEeeeccCcchHHhHhcCCCC---CCCCCcccccccEEEEEeCCCCCC
Q 018067           11 KNAFGWAAKDTSGVLSPFHFSRRATGEKDVTFKVTHCGICHSDLHMIKNEWGN---TIYPIVPGHEIVGVVTEVGSKVSK   87 (361)
Q Consensus        11 ~~~~~~~~~~~~~~l~~~~~~~p~~~~~evlV~v~~~~i~~~D~~~~~g~~~~---~~~p~~lG~e~~G~Vv~vG~~v~~   87 (361)
                      |+++.+.. ++++ ++++++|.|+|+++||||||+++|||++|++.++|.++.   ..+|.++|||++|+|+++|++ ++
T Consensus         1 mka~~~~~-~~~~-l~~~~~p~p~~~~~evlVkv~a~gi~~~D~~~~~g~~~~~~~~~~p~i~G~e~~G~V~~vG~~-~~   77 (355)
T cd08230           1 MKAIAVKP-GKPG-VRVVDIPEPEPTPGEVLVRTLEVGVCGTDREIVAGEYGTAPPGEDFLVLGHEALGVVEEVGDG-SG   77 (355)
T ss_pred             CceeEecC-CCCC-CeEEeCCCCCCCCCeEEEEEEEEEeccccHHHHcCCCCCCCCCCCCeeeccccceEEEEecCC-CC
Confidence            56666653 2333 889999999999999999999999999999999986532   245789999999999999999 99


Q ss_pred             CCCCCEEEeccccCCCCCCcccccCCCCCCcchhcccccccCCCCcCCCcceeEEeecCCceEECCCCCCcccccccchh
Q 018067           88 FKVGDKVGVGCMVGSCRSCDSCAIDLENYCPKVIMTYANKYHDGTITYGGYSDIMVADEHFVVRIPEGTPLDATAPLLCA  167 (361)
Q Consensus        88 ~~~GdrV~~~~~~~~c~~c~~c~~~~~~~c~~~~~~~~~~~~~~~~~~g~~a~~v~v~~~~~~~ip~~~~~~~aa~l~~~  167 (361)
                      |++||||++.+. .+|++|.+|.+|+++.|.+..+...+    .....|+|+||+.++.+.++++|++++  +++.+.++
T Consensus        78 ~~vGdrV~~~~~-~~cg~C~~c~~g~~~~c~~~~~~~~g----~~~~~G~~aey~~~~~~~~~~~P~~~~--~~a~~~~p  150 (355)
T cd08230          78 LSPGDLVVPTVR-RPPGKCLNCRIGRPDFCETGEYTERG----IKGLHGFMREYFVDDPEYLVKVPPSLA--DVGVLLEP  150 (355)
T ss_pred             CCCCCEEEeccc-cCCCcChhhhCcCcccCCCcceeccC----cCCCCccceeEEEeccccEEECCCCCC--cceeecch
Confidence            999999987654 48999999999999999875432111    112479999999999999999999998  33444445


Q ss_pred             hhhhhhHhhhc------CCCCCCCEEEEEcCChHHHHHHHHHHHcCCeEEEEeCC--chhHHHHHHHcCCCEEecCCCHH
Q 018067          168 GITVYSPLRFY------GLDKPGMHVGVVGLGGLGHVAVKFAKAMGVKVTVISTS--PSKKSEAIERLGADSFLVSRDQD  239 (361)
Q Consensus       168 ~~ta~~~l~~~------~~~~~g~~vlV~Gag~vG~~a~~la~~~g~~vi~~~~~--~~~~~~~~~~~g~~~vv~~~~~~  239 (361)
                      +.+++.++...      ...++|++|+|+|+|++|++++|+|+++|++|++++++  .+++.++++++|++. +++.+++
T Consensus       151 ~~~~~~a~~~~~~~~~~~~~~~g~~vlI~G~G~vG~~a~q~ak~~G~~vi~~~~~~~~~~~~~~~~~~Ga~~-v~~~~~~  229 (355)
T cd08230         151 LSVVEKAIEQAEAVQKRLPTWNPRRALVLGAGPIGLLAALLLRLRGFEVYVLNRRDPPDPKADIVEELGATY-VNSSKTP  229 (355)
T ss_pred             HHHHHHHHHHHhhhhhhcccCCCCEEEEECCCHHHHHHHHHHHHcCCeEEEEecCCCCHHHHHHHHHcCCEE-ecCCccc
Confidence            55544443221      22468999999999999999999999999999998873  234455668999986 4655433


Q ss_pred             HHH-HhcCCccEEEEcCCCcccHHHHHhccccCCEEEEecCCCC--CcccC----hHHHHhCCcEEEecccCCHHHHHHH
Q 018067          240 EMQ-AAMGTMDGIIDTVSAVHPLMPLIGLLKSQGKLVLVGAPEK--PLELP----AFSLLMGRKIVGGSMIGGMKETQEM  312 (361)
Q Consensus       240 ~~~-~~~~g~d~vid~~g~~~~~~~~~~~l~~~G~~v~~g~~~~--~~~~~----~~~~~~~~~~i~g~~~~~~~~~~~~  312 (361)
                      ... ....++|+|||++|+...+..+++.++++|+++.+|...+  ...++    ...++.|++++.|+...+.++++++
T Consensus       230 ~~~~~~~~~~d~vid~~g~~~~~~~~~~~l~~~G~~v~~G~~~~~~~~~~~~~~~~~~~~~k~~~i~g~~~~~~~~~~~~  309 (355)
T cd08230         230 VAEVKLVGEFDLIIEATGVPPLAFEALPALAPNGVVILFGVPGGGREFEVDGGELNRDLVLGNKALVGSVNANKRHFEQA  309 (355)
T ss_pred             hhhhhhcCCCCEEEECcCCHHHHHHHHHHccCCcEEEEEecCCCCCccccChhhhhhhHhhcCcEEEEecCCchhhHHHH
Confidence            221 2235799999999987668999999999999999998654  34454    3457789999999988888889999


Q ss_pred             HHHHHcCC------CceeE-EEEecccHHHHHHHHHcCCCceEEEEEe
Q 018067          313 IDFAAKHN------IRADI-EVIPADYVNTALERLAKADVRYRFVIDV  353 (361)
Q Consensus       313 ~~ll~~~~------~~~~~-~~~~l~~~~~a~~~~~~~~~~gkvvi~~  353 (361)
                      ++++.++.      +++.+ ++|+|+|+++||+.+.++.  +|+++.+
T Consensus       310 ~~~l~~~~~~~~~~~~~~i~~~~~l~~~~~a~~~~~~~~--~K~v~~~  355 (355)
T cd08230         310 VEDLAQWKYRWPGVLERLITRRVPLEEFAEALTEKPDGE--IKVVIEW  355 (355)
T ss_pred             HHHHHhcccccccchHHheeeeecHHHHHHHHHhcccCC--eEEEeeC
Confidence            99999876      44444 8999999999999887654  5999864

Glucose dehydrogenase (GlcDH), a member of the medium chain dehydrogenase/zinc-dependent alcohol dehydrogenase-like family, catalyzes the NADP(+)-dependent oxidation of glucose to gluconate, the first step in the Entner-Doudoroff pathway, an alternative to or substitute for glycolysis or the pentose phosphate pathway. The medium chain dehydrogenases/reductase (MDR)/zinc-dependent alcohol dehydrogenase-like family, which contains the zinc-dependent alcohol dehydrogenase (ADH-Zn) and related proteins, is a diverse group of proteins related to the first identified member, class I mammalian ADH. MDRs display a broad range of activities and are distinguished from the smaller short chain dehydrogenases (~ 250 amino acids vs. the ~ 350 amino acids of the MDR). The MDR proteins have 2 domains: a C-terminal NAD(P) binding-Rossman fold domain of a beta-alpha form and an N-terminal catalytic domain with distant homology to GroES. The MDR group contai

>PRK10309 galactitol-1-phosphate dehydrogenase; Provisional

Probab=100.00  E-value=5e-47  Score=354.47  Aligned_cols=328  Identities=23%  Similarity=0.333  Sum_probs=266.9

Q ss_pred             cceeeeeecCCCCCccceeeccCCC-CCCeEEEEEeeeccCcchHHhHhcCCCCCCCCCcccccccEEEEEeCCCCCCCC
Q 018067           11 KNAFGWAAKDTSGVLSPFHFSRRAT-GEKDVTFKVTHCGICHSDLHMIKNEWGNTIYPIVPGHEIVGVVTEVGSKVSKFK   89 (361)
Q Consensus        11 ~~~~~~~~~~~~~~l~~~~~~~p~~-~~~evlV~v~~~~i~~~D~~~~~g~~~~~~~p~~lG~e~~G~Vv~vG~~v~~~~   89 (361)
                      |+++.+..   ++.+++.++|.|.+ .++||+|||+++++|++|++.+..... ..+|.++|||++|+|+++|+++++|+
T Consensus         1 Mka~~~~~---~~~~~~~~~~~P~~~~~~evlV~v~~~gi~~~D~~~~~~~~~-~~~p~i~G~e~~G~V~~vG~~v~~~~   76 (347)
T PRK10309          1 MKSVVNDT---DGIVRVAESPIPEIKHQDDVLVKVASSGLCGSDIPRIFKNGA-HYYPITLGHEFSGYVEAVGSGVDDLH   76 (347)
T ss_pred             CceEEEeC---CCceEEEECCCCCCCCCCEEEEEEEEEEEchhcHHHHhCCCC-CCCCcccccceEEEEEEeCCCCCCCC
Confidence            56666543   45688899999998 599999999999999999875432111 24578999999999999999999999


Q ss_pred             CCCEEEeccccCCCCCCcccccCCCCCCcchhcccccccCCCCcCCCcceeEEeecCCceEECCCCCCcccccccchhhh
Q 018067           90 VGDKVGVGCMVGSCRSCDSCAIDLENYCPKVIMTYANKYHDGTITYGGYSDIMVADEHFVVRIPEGTPLDATAPLLCAGI  169 (361)
Q Consensus        90 ~GdrV~~~~~~~~c~~c~~c~~~~~~~c~~~~~~~~~~~~~~~~~~g~~a~~v~v~~~~~~~ip~~~~~~~aa~l~~~~~  169 (361)
                      +||||++.+.. +|+.|.+|..|.++.|.+..+.       +....|+|+||+.++.+.++++|+++++++|+.+. .+.
T Consensus        77 vGd~V~~~~~~-~c~~c~~c~~g~~~~c~~~~~~-------g~~~~G~~aey~~v~~~~~~~lP~~~s~~~aa~~~-~~~  147 (347)
T PRK10309         77 PGDAVACVPLL-PCFTCPECLRGFYSLCAKYDFI-------GSRRDGGNAEYIVVKRKNLFALPTDMPIEDGAFIE-PIT  147 (347)
T ss_pred             CCCEEEECCCc-CCCCCcchhCcCcccCCCccee-------ccCCCCccceeEEeehHHeEECcCCCCHHHhhhhh-HHH
Confidence            99999887666 7999999999999999875331       33458999999999999999999999999988763 345


Q ss_pred             hhhhHhhhcCCCCCCCEEEEEcCChHHHHHHHHHHHcCCe-EEEEeCCchhHHHHHHHcCCCEEecCCCH--HHHHHhcC
Q 018067          170 TVYSPLRFYGLDKPGMHVGVVGLGGLGHVAVKFAKAMGVK-VTVISTSPSKKSEAIERLGADSFLVSRDQ--DEMQAAMG  246 (361)
Q Consensus       170 ta~~~l~~~~~~~~g~~vlV~Gag~vG~~a~~la~~~g~~-vi~~~~~~~~~~~~~~~~g~~~vv~~~~~--~~~~~~~~  246 (361)
                      ++|+++. ...+++|++|+|+|+|++|++++|+|+.+|++ |++++++++++.. ++++|++.++++++.  +.+.+++.
T Consensus       148 ~~~~~~~-~~~~~~g~~vlV~G~g~vG~~~~~~a~~~G~~~v~~~~~~~~~~~~-~~~~Ga~~~i~~~~~~~~~~~~~~~  225 (347)
T PRK10309        148 VGLHAFH-LAQGCEGKNVIIIGAGTIGLLAIQCAVALGAKSVTAIDINSEKLAL-AKSLGAMQTFNSREMSAPQIQSVLR  225 (347)
T ss_pred             HHHHHHH-hcCCCCCCEEEEECCCHHHHHHHHHHHHcCCCeEEEECCCHHHHHH-HHHcCCceEecCcccCHHHHHHHhc
Confidence            5777764 45578999999999999999999999999996 6777777776654 588999998887653  33344432


Q ss_pred             --Ccc-EEEEcCCCcccHHHHHhccccCCEEEEecCCCCCcccC---hHHHHhCCcEEEecccCC-----HHHHHHHHHH
Q 018067          247 --TMD-GIIDTVSAVHPLMPLIGLLKSQGKLVLVGAPEKPLELP---AFSLLMGRKIVGGSMIGG-----MKETQEMIDF  315 (361)
Q Consensus       247 --g~d-~vid~~g~~~~~~~~~~~l~~~G~~v~~g~~~~~~~~~---~~~~~~~~~~i~g~~~~~-----~~~~~~~~~l  315 (361)
                        ++| ++|||+|+...+..++++++++|+++.+|.......++   ...++.++++|.|++.+.     .+++++++++
T Consensus       226 ~~~~d~~v~d~~G~~~~~~~~~~~l~~~G~iv~~G~~~~~~~~~~~~~~~~~~~~~~i~g~~~~~~~~~~~~~~~~~~~~  305 (347)
T PRK10309        226 ELRFDQLILETAGVPQTVELAIEIAGPRAQLALVGTLHHDLHLTSATFGKILRKELTVIGSWMNYSSPWPGQEWETASRL  305 (347)
T ss_pred             CCCCCeEEEECCCCHHHHHHHHHHhhcCCEEEEEccCCCCcccChhhhhHHhhcCcEEEEEeccccCCcchhHHHHHHHH
Confidence              688 99999998766899999999999999999765443333   235677999999987642     3678999999


Q ss_pred             HHcCCCc--eeE-EEEecccHHHHHHHHHcCCCceEEEEEe
Q 018067          316 AAKHNIR--ADI-EVIPADYVNTALERLAKADVRYRFVIDV  353 (361)
Q Consensus       316 l~~~~~~--~~~-~~~~l~~~~~a~~~~~~~~~~gkvvi~~  353 (361)
                      +++|+++  +.+ ++|+|+++++||+.+.+++..||+++.+
T Consensus       306 ~~~g~i~~~~~i~~~~~l~~~~~A~~~~~~~~~~gKvvv~~  346 (347)
T PRK10309        306 LTERKLSLEPLIAHRGSFESFAQAVRDLAGNPMPGKVLLQI  346 (347)
T ss_pred             HHcCCCCchhheEEEeeHHHHHHHHHHHhcCCcceEEEEeC
Confidence            9999985  334 8999999999999999998889999976

>cd08296 CAD_like Cinnamyl alcohol dehydrogenases (CAD)

Probab=100.00  E-value=1.4e-46  Score=349.60  Aligned_cols=331  Identities=35%  Similarity=0.623  Sum_probs=287.4

Q ss_pred             cceeeeeecCCCCCccceeeccCCCCCCeEEEEEeeeccCcchHHhHhcCCCCCCCCCcccccccEEEEEeCCCCCCCCC
Q 018067           11 KNAFGWAAKDTSGVLSPFHFSRRATGEKDVTFKVTHCGICHSDLHMIKNEWGNTIYPIVPGHEIVGVVTEVGSKVSKFKV   90 (361)
Q Consensus        11 ~~~~~~~~~~~~~~l~~~~~~~p~~~~~evlV~v~~~~i~~~D~~~~~g~~~~~~~p~~lG~e~~G~Vv~vG~~v~~~~~   90 (361)
                      |+++.+..  ..+.+++++++.|+++++||+||+.++++|++|++.+.|..+...+|.++|||++|+|+++|+++.+|++
T Consensus         1 m~a~~~~~--~~~~~~~~~~~~p~~~~~~v~v~v~~~~i~~~d~~~~~g~~~~~~~p~~~g~e~~G~v~~vG~~v~~~~~   78 (333)
T cd08296           1 YKAVQVTE--PGGPLELVERDVPLPGPGEVLIKVEACGVCHSDAFVKEGAMPGLSYPRVPGHEVVGRIDAVGEGVSRWKV   78 (333)
T ss_pred             CeEEEEcc--CCCCceEEeccCCCCCCCEEEEEEEEEecchHHHHHHhCCCCCCCCCcccCcceeEEEEEECCCCccCCC
Confidence            45555543  2256888999999999999999999999999999998886654466889999999999999999999999


Q ss_pred             CCEEEeccccCCCCCCcccccCCCCCCcchhcccccccCCCCcCCCcceeEEeecCCceEECCCCCCcccccccchhhhh
Q 018067           91 GDKVGVGCMVGSCRSCDSCAIDLENYCPKVIMTYANKYHDGTITYGGYSDIMVADEHFVVRIPEGTPLDATAPLLCAGIT  170 (361)
Q Consensus        91 GdrV~~~~~~~~c~~c~~c~~~~~~~c~~~~~~~~~~~~~~~~~~g~~a~~v~v~~~~~~~ip~~~~~~~aa~l~~~~~t  170 (361)
                      ||||++.+....|++|.+|..|.++.|....+.       +....|+|++|+.++.+.++++|+++++.+++.+++.+.+
T Consensus        79 Gd~V~~~~~~~~~~~~~~~~~g~~~~c~~~~~~-------~~~~~g~~a~~~~v~~~~~~~lp~~~~~~~aa~l~~~~~t  151 (333)
T cd08296          79 GDRVGVGWHGGHCGTCDACRRGDFVHCENGKVT-------GVTRDGGYAEYMLAPAEALARIPDDLDAAEAAPLLCAGVT  151 (333)
T ss_pred             CCEEEeccccCCCCCChhhhCcCcccCCCCCcc-------CcccCCcceeEEEEchhheEeCCCCCCHHHhhhhhhhhHH
Confidence            999998777889999999999999999975421       3334689999999999999999999999999999999999


Q ss_pred             hhhHhhhcCCCCCCCEEEEEcCChHHHHHHHHHHHcCCeEEEEeCCchhHHHHHHHcCCCEEecCCCHHHHHHhc--CCc
Q 018067          171 VYSPLRFYGLDKPGMHVGVVGLGGLGHVAVKFAKAMGVKVTVISTSPSKKSEAIERLGADSFLVSRDQDEMQAAM--GTM  248 (361)
Q Consensus       171 a~~~l~~~~~~~~g~~vlV~Gag~vG~~a~~la~~~g~~vi~~~~~~~~~~~~~~~~g~~~vv~~~~~~~~~~~~--~g~  248 (361)
                      ||+++... .+.++++|||+|+|.+|++++++|+.+|++|++++++++++..+ +++|+++++++...+....+.  .++
T Consensus       152 a~~~~~~~-~~~~~~~vlV~g~g~iG~~~~~~a~~~G~~vi~~~~~~~~~~~~-~~~g~~~~i~~~~~~~~~~~~~~~~~  229 (333)
T cd08296         152 TFNALRNS-GAKPGDLVAVQGIGGLGHLAVQYAAKMGFRTVAISRGSDKADLA-RKLGAHHYIDTSKEDVAEALQELGGA  229 (333)
T ss_pred             HHHHHHhc-CCCCCCEEEEECCcHHHHHHHHHHHHCCCeEEEEeCChHHHHHH-HHcCCcEEecCCCccHHHHHHhcCCC
Confidence            99999776 68999999999999999999999999999999999887776655 889999988887654333222  479


Q ss_pred             cEEEEcCCCcccHHHHHhccccCCEEEEecCCCCCcccChHHHHhCCcEEEecccCCHHHHHHHHHHHHcCCCceeEEEE
Q 018067          249 DGIIDTVSAVHPLMPLIGLLKSQGKLVLVGAPEKPLELPAFSLLMGRKIVGGSMIGGMKETQEMIDFAAKHNIRADIEVI  328 (361)
Q Consensus       249 d~vid~~g~~~~~~~~~~~l~~~G~~v~~g~~~~~~~~~~~~~~~~~~~i~g~~~~~~~~~~~~~~ll~~~~~~~~~~~~  328 (361)
                      |++||+.|....+..++++++++|+++.+|.......++...++.+++++.++..+..++++.+++++.++++++.++.|
T Consensus       230 d~vi~~~g~~~~~~~~~~~l~~~G~~v~~g~~~~~~~~~~~~~~~~~~~i~~~~~~~~~~~~~~~~~~~~~~l~~~v~~~  309 (333)
T cd08296         230 KLILATAPNAKAISALVGGLAPRGKLLILGAAGEPVAVSPLQLIMGRKSIHGWPSGTALDSEDTLKFSALHGVRPMVETF  309 (333)
T ss_pred             CEEEECCCchHHHHHHHHHcccCCEEEEEecCCCCCCcCHHHHhhcccEEEEeCcCCHHHHHHHHHHHHhCCCCceEEEE
Confidence            99999998666689999999999999999987655667777778899999999888888999999999999988777899


Q ss_pred             ecccHHHHHHHHHcCCCceEEEEE
Q 018067          329 PADYVNTALERLAKADVRYRFVID  352 (361)
Q Consensus       329 ~l~~~~~a~~~~~~~~~~gkvvi~  352 (361)
                      +++++.+||+.+.+++..||+|++
T Consensus       310 ~~~~~~~a~~~~~~~~~~gk~v~~  333 (333)
T cd08296         310 PLEKANEAYDRMMSGKARFRVVLT  333 (333)
T ss_pred             EHHHHHHHHHHHHCCCCceeEEeC
Confidence            999999999999999989999874

Cinnamyl alcohol dehydrogenases (CAD), members of the medium chain dehydrogenase/reductase family, reduce cinnamaldehydes to cinnamyl alcohols in the last step of monolignal metabolism in plant cells walls. CAD binds 2 zinc ions and is NADPH- dependent. CAD family members are also found in non-plant species, e.g. in yeast where they have an aldehyde reductase activity. The medium chain dehydrogenases/reductase (MDR)/zinc-dependent alcohol dehydrogenase-like family, which contains the zinc-dependent alcohol dehydrogenase (ADH-Zn) and related proteins, is a diverse group of proteins related to the first identified member, class I mammalian ADH. MDRs display a broad range of activities and are distinguished from the smaller short chain dehydrogenases (~ 250 amino acids vs. the ~ 350 amino acids of the MDR). The MDR proteins have 2 domains: a C-terminal NAD(P) binding-Rossmann fold domain of a beta-alpha form and an N-terminal catal

>KOG1197 consensus Predicted quinone oxidoreductase [Energy production and conversion; General function prediction only]

Probab=100.00  E-value=1.3e-47  Score=321.25  Aligned_cols=314  Identities=22%  Similarity=0.289  Sum_probs=271.0

Q ss_pred             CcccceeeeeecCCCCCccceeeccCCCCCCeEEEEEeeeccCcchHHhHhcCCCCCCCCCcccccccEEEEEeCCCCCC
Q 018067            8 EHPKNAFGWAAKDTSGVLSPFHFSRRATGEKDVTFKVTHCGICHSDLHMIKNEWGNTIYPIVPGHEIVGVVTEVGSKVSK   87 (361)
Q Consensus         8 ~~~~~~~~~~~~~~~~~l~~~~~~~p~~~~~evlV~v~~~~i~~~D~~~~~g~~~~~~~p~~lG~e~~G~Vv~vG~~v~~   87 (361)
                      |...+.+.++..++++.+++++.|+|+|.|+|++||-.++|+|..|..+++|-+.....|++||.|++|+|+++|++|++
T Consensus         6 p~~~k~i~v~e~Ggydvlk~ed~pv~~papgel~iknka~GlNfid~y~RkGlY~~~plPytpGmEaaGvVvAvG~gvtd   85 (336)
T KOG1197|consen    6 PPLLKCIVVTEFGGYDVLKLEDRPVPPPAPGELTIKNKACGLNFIDLYFRKGLYDPAPLPYTPGMEAAGVVVAVGEGVTD   85 (336)
T ss_pred             CchheEEEEeccCCcceEEEeeecCCCCCCCceEEeehhcCccHHHHHHhccccCCCCCCcCCCcccceEEEEecCCccc
Confidence            33456777778788999999999999999999999999999999999999999877799999999999999999999999


Q ss_pred             CCCCCEEEeccccCCCCCCcccccCCCCCCcchhcccccccCCCCcCCCcceeEEeecCCceEECCCCCCcccccccchh
Q 018067           88 FKVGDKVGVGCMVGSCRSCDSCAIDLENYCPKVIMTYANKYHDGTITYGGYSDIMVADEHFVVRIPEGTPLDATAPLLCA  167 (361)
Q Consensus        88 ~~~GdrV~~~~~~~~c~~c~~c~~~~~~~c~~~~~~~~~~~~~~~~~~g~~a~~v~v~~~~~~~ip~~~~~~~aa~l~~~  167 (361)
                      +++||||+..                                   ...|.|+|++.+|...++++|+.+++.+||++...
T Consensus        86 rkvGDrVayl-----------------------------------~~~g~yaee~~vP~~kv~~vpe~i~~k~aaa~llq  130 (336)
T KOG1197|consen   86 RKVGDRVAYL-----------------------------------NPFGAYAEEVTVPSVKVFKVPEAITLKEAAALLLQ  130 (336)
T ss_pred             cccccEEEEe-----------------------------------ccchhhheeccccceeeccCCcccCHHHHHHHHHH
Confidence            9999999742                                   47899999999999999999999999999999999


Q ss_pred             hhhhhhHhhhcCCCCCCCEEEEEcC-ChHHHHHHHHHHHcCCeEEEEeCCchhHHHHHHHcCCCEEecCCCHHHHHHh--
Q 018067          168 GITVYSPLRFYGLDKPGMHVGVVGL-GGLGHVAVKFAKAMGVKVTVISTSPSKKSEAIERLGADSFLVSRDQDEMQAA--  244 (361)
Q Consensus       168 ~~ta~~~l~~~~~~~~g~~vlV~Ga-g~vG~~a~~la~~~g~~vi~~~~~~~~~~~~~~~~g~~~vv~~~~~~~~~~~--  244 (361)
                      ++|||.-+++...+++|++|||+.+ |++|++++|++|..|+.+|.++++.++++.+ ++.|+.+.|+++.+|.+++.  
T Consensus       131 ~lTAy~ll~e~y~vkpGhtVlvhaAAGGVGlll~Ql~ra~~a~tI~~asTaeK~~~a-kenG~~h~I~y~~eD~v~~V~k  209 (336)
T KOG1197|consen  131 GLTAYMLLFEAYNVKPGHTVLVHAAAGGVGLLLCQLLRAVGAHTIATASTAEKHEIA-KENGAEHPIDYSTEDYVDEVKK  209 (336)
T ss_pred             HHHHHHHHHHhcCCCCCCEEEEEeccccHHHHHHHHHHhcCcEEEEEeccHHHHHHH-HhcCCcceeeccchhHHHHHHh
Confidence            9999999999999999999999975 9999999999999999999999998886554 89999999999998866654  


Q ss_pred             -cC--CccEEEEcCCCcccHHHHHhccccCCEEEEecCCCCCc-ccChHHHHhCCcEE-----EecccCCHH---HHHHH
Q 018067          245 -MG--TMDGIIDTVSAVHPLMPLIGLLKSQGKLVLVGAPEKPL-ELPAFSLLMGRKIV-----GGSMIGGMK---ETQEM  312 (361)
Q Consensus       245 -~~--g~d~vid~~g~~~~~~~~~~~l~~~G~~v~~g~~~~~~-~~~~~~~~~~~~~i-----~g~~~~~~~---~~~~~  312 (361)
                       +.  |+|+++|++|.+. +...+.+|++.|.++.+|..++.. .++...+-.+++++     .|...+..+   -..++
T Consensus       210 iTngKGVd~vyDsvG~dt-~~~sl~~Lk~~G~mVSfG~asgl~~p~~l~~ls~k~l~lvrpsl~gYi~g~~el~~~v~rl  288 (336)
T KOG1197|consen  210 ITNGKGVDAVYDSVGKDT-FAKSLAALKPMGKMVSFGNASGLIDPIPLNQLSPKALQLVRPSLLGYIDGEVELVSYVARL  288 (336)
T ss_pred             ccCCCCceeeeccccchh-hHHHHHHhccCceEEEeccccCCCCCeehhhcChhhhhhccHhhhcccCCHHHHHHHHHHH
Confidence             43  8999999999988 999999999999999999765432 23333333344443     333333222   24566


Q ss_pred             HHHHHcCCCceeE-EEEecccHHHHHHHHHcCCCceEEEEEeCCccc
Q 018067          313 IDFAAKHNIRADI-EVIPADYVNTALERLAKADVRYRFVIDVANTMK  358 (361)
Q Consensus       313 ~~ll~~~~~~~~~-~~~~l~~~~~a~~~~~~~~~~gkvvi~~~~~~~  358 (361)
                      +.++-++.++..+ |+|||+++.+|+.++++++..||+++.+.++..
T Consensus       289 ~alvnsg~lk~~I~~~ypls~vadA~~diesrktvGkvlLlp~~~~~  335 (336)
T KOG1197|consen  289 FALVNSGHLKIHIDHVYPLSKVADAHADIESRKTVGKVLLLPGPEKE  335 (336)
T ss_pred             HHHhhcCccceeeeeecchHHHHHHHHHHHhhhccceEEEeCCcccc
Confidence            7788899999999 899999999999999999999999999887653

>cd08237 ribitol-5-phosphate_DH ribitol-5-phosphate dehydrogenase

Probab=100.00  E-value=1.7e-47  Score=356.35  Aligned_cols=320  Identities=18%  Similarity=0.183  Sum_probs=251.1

Q ss_pred             cceeeeeecCCCCCccceeeccCCCCCCeEEEEEeeeccCcchHHhHhcCCCC----CCCCCcccccccEEEEEeCCCCC
Q 018067           11 KNAFGWAAKDTSGVLSPFHFSRRATGEKDVTFKVTHCGICHSDLHMIKNEWGN----TIYPIVPGHEIVGVVTEVGSKVS   86 (361)
Q Consensus        11 ~~~~~~~~~~~~~~l~~~~~~~p~~~~~evlV~v~~~~i~~~D~~~~~g~~~~----~~~p~~lG~e~~G~Vv~vG~~v~   86 (361)
                      |+..++.. .+|+.+++++++.|+ +++||||||+++|||++|++.++|.+..    ..+|.++|||++|+|+++|..  
T Consensus         1 ~~~~~~~~-~~~~~~~~~~~~~P~-~~~eVlVkv~a~gIc~sD~~~~~G~~~~~~~~~~~P~i~GhE~~G~V~~~g~~--   76 (341)
T cd08237           1 MINQVYRL-VRPKFFEVTYEEENL-REDWVIVRPTYLSICHADQRYYQGNRSPEALKKKLPMALIHEGIGVVVSDPTG--   76 (341)
T ss_pred             CcccceEE-eccceEEEeecCCCC-CCCeEEEEEEEEEEcCccHHHHcCCCCcccccCCCCeeccceeEEEEEeeCCC--
Confidence            33445555 478889999999995 9999999999999999999999986532    357999999999999998864  


Q ss_pred             CCCCCCEEEeccccCCCCCCcccccCCCCCCcchhcccccccCCCCcCCCcceeEEeecCCceEECCCCCCcccccccch
Q 018067           87 KFKVGDKVGVGCMVGSCRSCDSCAIDLENYCPKVIMTYANKYHDGTITYGGYSDIMVADEHFVVRIPEGTPLDATAPLLC  166 (361)
Q Consensus        87 ~~~~GdrV~~~~~~~~c~~c~~c~~~~~~~c~~~~~~~~~~~~~~~~~~g~~a~~v~v~~~~~~~ip~~~~~~~aa~l~~  166 (361)
                      +|++||||++.+.. +|+ |.+|  +..|.|.+..+.       +...+|+|+||+.+|+++++++|+++++++|+ +..
T Consensus        77 ~~~vGdrV~~~~~~-~~~-~~~~--~~~~~c~~~~~~-------g~~~~G~~aey~~v~~~~~~~vP~~l~~~~aa-~~~  144 (341)
T cd08237          77 TYKVGTKVVMVPNT-PVE-KDEI--IPENYLPSSRFR-------SSGYDGFMQDYVFLPPDRLVKLPDNVDPEVAA-FTE  144 (341)
T ss_pred             ccCCCCEEEECCCC-Cch-hccc--chhccCCCccee-------EecCCCceEEEEEEchHHeEECCCCCChHHhh-hhc
Confidence            69999999987765 477 5566  356788765331       22347999999999999999999999998876 445


Q ss_pred             hhhhhhhHhhhc--CCCCCCCEEEEEcCChHHHHHHHHHHH-cC-CeEEEEeCCchhHHHHHHHcCCCEEecCCCHHHHH
Q 018067          167 AGITVYSPLRFY--GLDKPGMHVGVVGLGGLGHVAVKFAKA-MG-VKVTVISTSPSKKSEAIERLGADSFLVSRDQDEMQ  242 (361)
Q Consensus       167 ~~~ta~~~l~~~--~~~~~g~~vlV~Gag~vG~~a~~la~~-~g-~~vi~~~~~~~~~~~~~~~~g~~~vv~~~~~~~~~  242 (361)
                      ++.++|+++.+.  ..+++|++|||+|+|++|++++|+|+. +| .+|+++++++++++.+ ++++++..++    +...
T Consensus       145 ~~~~a~~a~~~~~~~~~~~g~~VlV~G~G~vGl~~~~~a~~~~g~~~vi~~~~~~~k~~~a-~~~~~~~~~~----~~~~  219 (341)
T cd08237         145 LVSVGVHAISRFEQIAHKDRNVIGVWGDGNLGYITALLLKQIYPESKLVVFGKHQEKLDLF-SFADETYLID----DIPE  219 (341)
T ss_pred             hHHHHHHHHHHHhhcCCCCCCEEEEECCCHHHHHHHHHHHHhcCCCcEEEEeCcHhHHHHH-hhcCceeehh----hhhh
Confidence            788889988653  335889999999999999999999986 65 5888888887766544 5666543321    1111


Q ss_pred             HhcCCccEEEEcCCC---cccHHHHHhccccCCEEEEecCCCCCcccChHHHHhCCcEEEecccCCHHHHHHHHHHHHcC
Q 018067          243 AAMGTMDGIIDTVSA---VHPLMPLIGLLKSQGKLVLVGAPEKPLELPAFSLLMGRKIVGGSMIGGMKETQEMIDFAAKH  319 (361)
Q Consensus       243 ~~~~g~d~vid~~g~---~~~~~~~~~~l~~~G~~v~~g~~~~~~~~~~~~~~~~~~~i~g~~~~~~~~~~~~~~ll~~~  319 (361)
                        ..++|+|||++|+   +.++..++++++++|+++.+|.......++...++.|++++.|+...+.++++++++++.++
T Consensus       220 --~~g~d~viD~~G~~~~~~~~~~~~~~l~~~G~iv~~G~~~~~~~~~~~~~~~k~~~i~g~~~~~~~~~~~~~~~~~~~  297 (341)
T cd08237         220 --DLAVDHAFECVGGRGSQSAINQIIDYIRPQGTIGLMGVSEYPVPINTRMVLEKGLTLVGSSRSTREDFERAVELLSRN  297 (341)
T ss_pred             --ccCCcEEEECCCCCccHHHHHHHHHhCcCCcEEEEEeecCCCcccCHHHHhhCceEEEEecccCHHHHHHHHHHHHhC
Confidence              1279999999994   44688999999999999999976555667777788899999999887788899999999998


Q ss_pred             -----CCceeE-EEEecc---cHHHHHHHHHcCCCceEEEEEeC
Q 018067          320 -----NIRADI-EVIPAD---YVNTALERLAKADVRYRFVIDVA  354 (361)
Q Consensus       320 -----~~~~~~-~~~~l~---~~~~a~~~~~~~~~~gkvvi~~~  354 (361)
                           ++++.+ ++|+|+   ++.++|+.+.++ ..||+||.++
T Consensus       298 ~~~~~~l~~~i~~~~~l~~l~~~~~a~~~~~~~-~~gKvvi~~~  340 (341)
T cd08237         298 PEVAEYLRKLVGGVFPVRSINDIHRAFESDLTN-SWGKTVMEWE  340 (341)
T ss_pred             CcccCChHHHhccccccccHHHHHHHHHHHhhc-CcceEEEEee
Confidence                 355555 789985   556666555544 5799999864

NAD-linked ribitol-5-phosphate dehydrogenase, a member of the MDR/zinc-dependent alcohol dehydrogenase-like family, oxidizes the phosphate ester of ribitol-5-phosphate to xylulose-5-phosphate of the pentose phosphate pathway. The medium chain dehydrogenases/reductase (MDR)/zinc-dependent alcohol dehydrogenase-like family, which contains the zinc-dependent alcohol dehydrogenase (ADH-Zn) and related proteins, is a diverse group of proteins related to the first identified member, class I mammalian ADH. MDRs display a broad range of activities and are distinguished from the smaller short chain dehydrogenases (~ 250 amino acids vs. the ~ 350 amino acids of the MDR). The MDR proteins have 2 domains: a C-terminal NAD(P) binding-Rossmann fold domain of a beta-alpha form and an N-terminal catalytic domain with distant homology to GroES. The MDR group contains a host of activities, including the founding alcohol dehydrogenase (

>cd05283 CAD1 Cinnamyl alcohol dehydrogenases (CAD)

Probab=100.00  E-value=2.2e-46  Score=348.79  Aligned_cols=334  Identities=63%  Similarity=1.078  Sum_probs=293.7

Q ss_pred             eecCCCCCccceeeccCCCCCCeEEEEEeeeccCcchHHhHhcCCCCCCCCCcccccccEEEEEeCCCCCCCCCCCEEEe
Q 018067           17 AAKDTSGVLSPFHFSRRATGEKDVTFKVTHCGICHSDLHMIKNEWGNTIYPIVPGHEIVGVVTEVGSKVSKFKVGDKVGV   96 (361)
Q Consensus        17 ~~~~~~~~l~~~~~~~p~~~~~evlV~v~~~~i~~~D~~~~~g~~~~~~~p~~lG~e~~G~Vv~vG~~v~~~~~GdrV~~   96 (361)
                      ..+.....+++.+++.|++.++|++||++++++|++|++.+.|......+|.++|||++|+|+++|+++++|++||+|++
T Consensus         4 ~~~~~~~~~~~~~~~~p~~~~~evlirv~a~~i~~~d~~~~~g~~~~~~~p~~~g~e~~G~V~~vG~~v~~~~~Gd~V~~   83 (337)
T cd05283           4 AARDASGKLEPFTFERRPLGPDDVDIKITYCGVCHSDLHTLRNEWGPTKYPLVPGHEIVGIVVAVGSKVTKFKVGDRVGV   83 (337)
T ss_pred             EEecCCCCceEEeccCCCCCCCeEEEEEEEecccchHHHHhcCCcCCCCCCcccCcceeeEEEEECCCCcccCCCCEEEE
Confidence            33445578999999999999999999999999999999999887655567889999999999999999999999999987


Q ss_pred             ccccCCCCCCcccccCCCCCCcchhcccccccCCCCcCCCcceeEEeecCCceEECCCCCCcccccccchhhhhhhhHhh
Q 018067           97 GCMVGSCRSCDSCAIDLENYCPKVIMTYANKYHDGTITYGGYSDIMVADEHFVVRIPEGTPLDATAPLLCAGITVYSPLR  176 (361)
Q Consensus        97 ~~~~~~c~~c~~c~~~~~~~c~~~~~~~~~~~~~~~~~~g~~a~~v~v~~~~~~~ip~~~~~~~aa~l~~~~~ta~~~l~  176 (361)
                      .+....|++|.+|.+++.++|+...+.+.+....+....|+|+||+.++.+.++++|+++++++++.+.+.+.+||++++
T Consensus        84 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~v~~~~~~~lp~~~~~~~aa~l~~~~~ta~~~~~  163 (337)
T cd05283          84 GCQVDSCGTCEQCKSGEEQYCPKGVVTYNGKYPDGTITQGGYADHIVVDERFVFKIPEGLDSAAAAPLLCAGITVYSPLK  163 (337)
T ss_pred             ecCCCCCCCCccccCCchhcCcchhhcccccccCCCcCCCcceeEEEechhheEECCCCCCHHHhhhhhhHHHHHHHHHH
Confidence            77778999999999999999998766554444445556899999999999999999999999999999999999999998


Q ss_pred             hcCCCCCCCEEEEEcCChHHHHHHHHHHHcCCeEEEEeCCchhHHHHHHHcCCCEEecCCCHHHHHHhcCCccEEEEcCC
Q 018067          177 FYGLDKPGMHVGVVGLGGLGHVAVKFAKAMGVKVTVISTSPSKKSEAIERLGADSFLVSRDQDEMQAAMGTMDGIIDTVS  256 (361)
Q Consensus       177 ~~~~~~~g~~vlV~Gag~vG~~a~~la~~~g~~vi~~~~~~~~~~~~~~~~g~~~vv~~~~~~~~~~~~~g~d~vid~~g  256 (361)
                      +.. +++|++++|.|+|.+|++++++|+.+|++++++++++++...+ +++|++.+++.+..+.......++|++||++|
T Consensus       164 ~~~-~~~g~~vlV~g~g~vG~~~~~~a~~~G~~v~~~~~~~~~~~~~-~~~g~~~vi~~~~~~~~~~~~~~~d~v~~~~g  241 (337)
T cd05283         164 RNG-VGPGKRVGVVGIGGLGHLAVKFAKALGAEVTAFSRSPSKKEDA-LKLGADEFIATKDPEAMKKAAGSLDLIIDTVS  241 (337)
T ss_pred             hcC-CCCCCEEEEECCcHHHHHHHHHHHHcCCeEEEEcCCHHHHHHH-HHcCCcEEecCcchhhhhhccCCceEEEECCC
Confidence            765 7999999998889999999999999999999998887776665 78999988887776554555568999999999


Q ss_pred             CcccHHHHHhccccCCEEEEecCCCCCcccChHHHHhCCcEEEecccCCHHHHHHHHHHHHcCCCceeEEEEecccHHHH
Q 018067          257 AVHPLMPLIGLLKSQGKLVLVGAPEKPLELPAFSLLMGRKIVGGSMIGGMKETQEMIDFAAKHNIRADIEVIPADYVNTA  336 (361)
Q Consensus       257 ~~~~~~~~~~~l~~~G~~v~~g~~~~~~~~~~~~~~~~~~~i~g~~~~~~~~~~~~~~ll~~~~~~~~~~~~~l~~~~~a  336 (361)
                      ....+..++++++++|+++.+|..+....++...++.+++++.++.....++++.+++++.++++++.++.++++++++|
T Consensus       242 ~~~~~~~~~~~l~~~G~~v~~g~~~~~~~~~~~~~~~~~~~i~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~a  321 (337)
T cd05283         242 ASHDLDPYLSLLKPGGTLVLVGAPEEPLPVPPFPLIFGRKSVAGSLIGGRKETQEMLDFAAEHGIKPWVEVIPMDGINEA  321 (337)
T ss_pred             CcchHHHHHHHhcCCCEEEEEeccCCCCccCHHHHhcCceEEEEecccCHHHHHHHHHHHHhCCCccceEEEEHHHHHHH
Confidence            87558899999999999999998655446667777789999999998888999999999999999877789999999999


Q ss_pred             HHHHHcCCCceEEEEE
Q 018067          337 LERLAKADVRYRFVID  352 (361)
Q Consensus       337 ~~~~~~~~~~gkvvi~  352 (361)
                      |+.+.+++..||+|++
T Consensus       322 ~~~~~~~~~~~k~v~~  337 (337)
T cd05283         322 LERLEKGDVRYRFVLD  337 (337)
T ss_pred             HHHHHcCCCcceEeeC
Confidence            9999999988999874

Cinnamyl alcohol dehydrogenases (CAD), members of the medium chain dehydrogenase/reductase family, reduce cinnamaldehydes to cinnamyl alcohols in the last step of monolignal metabolism in plant cells walls. CAD binds 2 zinc ions and is NADPH- dependent. CAD family members are also found in non-plant species, e.g. in yeast where they have an aldehyde reductase activity. The medium chain dehydrogenases/reductase (MDR)/zinc-dependent alcohol dehydrogenase-like family, which contains the zinc-dependent alcohol dehydrogenase (ADH-Zn) and related proteins, is a diverse group of proteins related to the first identified member, class I mammalian ADH. MDRs display a broad range of activities and are distinguished from the smaller short chain dehydrogenases (~ 250 amino acids vs. the ~ 350 amino acids of the MDR). The MDR proteins have 2 domains: a C-terminal NAD(P) binding-Rossmann fold domain of a beta-alpha form and an N-terminal catalytic

>cd08231 MDR_TM0436_like Hypothetical enzyme TM0436 resembles the zinc-dependent alcohol dehydrogenases (ADH)

Probab=100.00  E-value=2.3e-45  Score=345.17  Aligned_cols=328  Identities=26%  Similarity=0.340  Sum_probs=273.9

Q ss_pred             CCccceeeccCCCCCCeEEEEEeeeccCcchHHhHhcCCCCCCCCCcccccccEEEEEeCCCCCC------CCCCCEEEe
Q 018067           23 GVLSPFHFSRRATGEKDVTFKVTHCGICHSDLHMIKNEWGNTIYPIVPGHEIVGVVTEVGSKVSK------FKVGDKVGV   96 (361)
Q Consensus        23 ~~l~~~~~~~p~~~~~evlV~v~~~~i~~~D~~~~~g~~~~~~~p~~lG~e~~G~Vv~vG~~v~~------~~~GdrV~~   96 (361)
                      +.+++++++.|.++++||+|||.++++|++|++.+.|.++...+|.++|||++|+|+++|++++.      |++||+|++
T Consensus        11 ~~l~~~~~~~p~~~~~evlV~v~a~~l~~~d~~~~~g~~~~~~~p~~~G~e~~G~V~~vG~~v~~~~~~~~~~~Gd~V~~   90 (361)
T cd08231          11 KPLEIREVPLPDLEPGAVLVRVRLAGVCGSDVHTVAGRRPRVPLPIILGHEGVGRVVALGGGVTTDVAGEPLKVGDRVTW   90 (361)
T ss_pred             CCCEEEeccCCCCCCCeEEEEEEEEeecCccHHHhcCCCCCCCCCcccccCCceEEEEeCCCccccccCCccCCCCEEEE
Confidence            47889999999999999999999999999999999887653467889999999999999999986      999999987


Q ss_pred             ccccCCCCCCcccccCCCCCCcchhcccccccCCCCcCCCcceeEEeecCC-ceEECCCCCCcccccccchhhhhhhhHh
Q 018067           97 GCMVGSCRSCDSCAIDLENYCPKVIMTYANKYHDGTITYGGYSDIMVADEH-FVVRIPEGTPLDATAPLLCAGITVYSPL  175 (361)
Q Consensus        97 ~~~~~~c~~c~~c~~~~~~~c~~~~~~~~~~~~~~~~~~g~~a~~v~v~~~-~~~~ip~~~~~~~aa~l~~~~~ta~~~l  175 (361)
                      .+.+ +|+.|.+|+.+.++.|.+..+.-...........|+|+||+.++.+ +++++|+++++.+++.+++++.|||+++
T Consensus        91 ~~~~-~~~~c~~~~~~~~~~c~~~~~~~~~~~~~~~~~~g~~a~~~~v~~~~~~~~lP~~~~~~~aa~~~~~~~ta~~al  169 (361)
T cd08231          91 SVGA-PCGRCYRCLVGDPTKCENRKKYGHEASCDDPHLSGGYAEHIYLPPGTAIVRVPDNVPDEVAAPANCALATVLAAL  169 (361)
T ss_pred             cccC-CCCCChhHhCcCccccccchhccccccccCCCCCcccceEEEecCCCceEECCCCCCHHHHHHhcCHHHHHHHHH
Confidence            6655 8999999999999999986532111111111246999999999986 7999999999999999889999999999


Q ss_pred             hhcCCCCCCCEEEEEcCChHHHHHHHHHHHcCC-eEEEEeCCchhHHHHHHHcCCCEEecCCCHH------HHHHhcC--
Q 018067          176 RFYGLDKPGMHVGVVGLGGLGHVAVKFAKAMGV-KVTVISTSPSKKSEAIERLGADSFLVSRDQD------EMQAAMG--  246 (361)
Q Consensus       176 ~~~~~~~~g~~vlV~Gag~vG~~a~~la~~~g~-~vi~~~~~~~~~~~~~~~~g~~~vv~~~~~~------~~~~~~~--  246 (361)
                      .+....++|++|||+|+|.+|++++++|+.+|+ +|+++++++++.. +++++|++.++++++.+      .+.++++  
T Consensus       170 ~~~~~~~~g~~vlI~g~g~vG~~~~~lak~~G~~~v~~~~~~~~~~~-~~~~~g~~~vi~~~~~~~~~~~~~i~~~~~~~  248 (361)
T cd08231         170 DRAGPVGAGDTVVVQGAGPLGLYAVAAAKLAGARRVIVIDGSPERLE-LAREFGADATIDIDELPDPQRRAIVRDITGGR  248 (361)
T ss_pred             HhccCCCCCCEEEEECCCHHHHHHHHHHHHcCCCeEEEEcCCHHHHH-HHHHcCCCeEEcCcccccHHHHHHHHHHhCCC
Confidence            888876799999999999999999999999999 8988888777665 44789999888776431      3444443  


Q ss_pred             CccEEEEcCCCcccHHHHHhccccCCEEEEecCCCC--CcccChHHHHhCCcEEEecccCCHHHHHHHHHHHHcC--CCc
Q 018067          247 TMDGIIDTVSAVHPLMPLIGLLKSQGKLVLVGAPEK--PLELPAFSLLMGRKIVGGSMIGGMKETQEMIDFAAKH--NIR  322 (361)
Q Consensus       247 g~d~vid~~g~~~~~~~~~~~l~~~G~~v~~g~~~~--~~~~~~~~~~~~~~~i~g~~~~~~~~~~~~~~ll~~~--~~~  322 (361)
                      ++|++||++|+...+..++++++++|+++.+|....  ...++...++.+++++.++...+.++++++++++.++  +++
T Consensus       249 ~~d~vid~~g~~~~~~~~~~~l~~~G~~v~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  328 (361)
T cd08231         249 GADVVIEASGHPAAVPEGLELLRRGGTYVLVGSVAPAGTVPLDPERIVRKNLTIIGVHNYDPSHLYRAVRFLERTQDRFP  328 (361)
T ss_pred             CCcEEEECCCChHHHHHHHHHhccCCEEEEEcCCCCCCccccCHHHHhhcccEEEEcccCCchhHHHHHHHHHhccCcCC
Confidence            799999999986668899999999999999997643  3455555678899999999887788899999999988  443


Q ss_pred             --eeE-EEEecccHHHHHHHHHcCCCceEEEEEe
Q 018067          323 --ADI-EVIPADYVNTALERLAKADVRYRFVIDV  353 (361)
Q Consensus       323 --~~~-~~~~l~~~~~a~~~~~~~~~~gkvvi~~  353 (361)
                        ..+ ++|+++++++||+.+.+++ .+|++|.+
T Consensus       329 ~~~~i~~~~~l~~~~~a~~~~~~~~-~~k~vi~~  361 (361)
T cd08231         329 FAELVTHRYPLEDINEALELAESGT-ALKVVIDP  361 (361)
T ss_pred             chhheeeeeeHHHHHHHHHHHHcCC-ceEEEeCC
Confidence              333 7899999999999999887 48999864

This group contains the hypothetical TM0436 alcohol dehydrogenase from Thermotoga maritima, proteins annotated as 5-exo-alcohol dehydrogenase, and other members of the medium chain dehydrogenases/reductase (MDR)/zinc-dependent alcohol dehydrogenase-like family. MDR, which contains the zinc-dependent alcohol dehydrogenase (ADH-Zn) and related proteins, is a diverse group of proteins related to the first identified member, class I mammalian ADH. MDRs display a broad range of activities and are distinguished from the smaller short chain dehydrogenases (~ 250 amino acids vs. the ~ 350 amino acids of the MDR). The MDR proteins have 2 domains: a C-terminal NAD(P) binding-Rossmann fold domain of a beta-alpha form and an N-terminal catalytic domain with distant homology to GroES. The MDR group contains a host of activities, including the founding alcohol dehydrogenase (ADH), quino

>cd08233 butanediol_DH_like (2R,3R)-2,3-butanediol dehydrogenase

Probab=100.00  E-value=1.2e-45  Score=345.70  Aligned_cols=327  Identities=28%  Similarity=0.421  Sum_probs=275.2

Q ss_pred             cceeeeeecCCCCCccceeeccCCCCCCeEEEEEeeeccCcchHHhHhcC-C--C--------CCCCCCcccccccEEEE
Q 018067           11 KNAFGWAAKDTSGVLSPFHFSRRATGEKDVTFKVTHCGICHSDLHMIKNE-W--G--------NTIYPIVPGHEIVGVVT   79 (361)
Q Consensus        11 ~~~~~~~~~~~~~~l~~~~~~~p~~~~~evlV~v~~~~i~~~D~~~~~g~-~--~--------~~~~p~~lG~e~~G~Vv   79 (361)
                      |+++.+.   .|+.+++++++.|++.++||+||+.++++|++|++.+.+. .  +        ...+|.++|||++|+|+
T Consensus         1 mka~~~~---~~~~l~~~~~~~p~~~~~evlV~v~a~~~~~~d~~~~~~~~~~~~~~~~~~~~~~~~p~i~G~e~~G~V~   77 (351)
T cd08233           1 MKAARYH---GRKDIRVEEVPEPPVKPGEVKIKVAWCGICGSDLHEYLDGPIFIPTEGHPHLTGETAPVTLGHEFSGVVV   77 (351)
T ss_pred             CceEEEe---cCCceEEEeccCCCCCCCeEEEEEEEEEECccchHhhcCCCccccccccccccccCCCceecccceEEEE
Confidence            5666664   3567899999999999999999999999999999876542 1  1        11368899999999999


Q ss_pred             EeCCCCCCCCCCCEEEeccccCCCCCCcccccCCCCCCcchhcccccccCCCC-cCCCcceeEEeecCCceEECCCCCCc
Q 018067           80 EVGSKVSKFKVGDKVGVGCMVGSCRSCDSCAIDLENYCPKVIMTYANKYHDGT-ITYGGYSDIMVADEHFVVRIPEGTPL  158 (361)
Q Consensus        80 ~vG~~v~~~~~GdrV~~~~~~~~c~~c~~c~~~~~~~c~~~~~~~~~~~~~~~-~~~g~~a~~v~v~~~~~~~ip~~~~~  158 (361)
                      ++|++++.|++||+|+..+.. +|++|.+|.++.+++|.+..+.       +. ...|+|++|+.++.+.++++|+++++
T Consensus        78 ~vG~~v~~~~~Gd~V~~~~~~-~~~~~~~~~~~~~~~~~~~~~~-------~~~~~~g~~a~~~~~~~~~~~~lP~~~~~  149 (351)
T cd08233          78 EVGSGVTGFKVGDRVVVEPTI-KCGTCGACKRGLYNLCDSLGFI-------GLGGGGGGFAEYVVVPAYHVHKLPDNVPL  149 (351)
T ss_pred             EeCCCCCCCCCCCEEEECCCC-CCCCChHHhCcCcccCCCCcee-------ccCCCCCceeeEEEechHHeEECcCCCCH
Confidence            999999999999999876554 8999999999999999875321       11 13699999999999999999999999


Q ss_pred             ccccccchhhhhhhhHhhhcCCCCCCCEEEEEcCChHHHHHHHHHHHcCC-eEEEEeCCchhHHHHHHHcCCCEEecCCC
Q 018067          159 DATAPLLCAGITVYSPLRFYGLDKPGMHVGVVGLGGLGHVAVKFAKAMGV-KVTVISTSPSKKSEAIERLGADSFLVSRD  237 (361)
Q Consensus       159 ~~aa~l~~~~~ta~~~l~~~~~~~~g~~vlV~Gag~vG~~a~~la~~~g~-~vi~~~~~~~~~~~~~~~~g~~~vv~~~~  237 (361)
                      ++++.+ .+..+||+++ ....+++|++|+|+|+|.+|++++|+|+.+|+ +|+++++++++.+.+ +++|++.++++++
T Consensus       150 ~~aa~~-~~~~ta~~~l-~~~~~~~g~~vlI~g~g~vG~~a~q~a~~~G~~~v~~~~~~~~~~~~~-~~~ga~~~i~~~~  226 (351)
T cd08233         150 EEAALV-EPLAVAWHAV-RRSGFKPGDTALVLGAGPIGLLTILALKAAGASKIIVSEPSEARRELA-EELGATIVLDPTE  226 (351)
T ss_pred             HHhhhc-cHHHHHHHHH-HhcCCCCCCEEEEECCCHHHHHHHHHHHHcCCCEEEEECCCHHHHHHH-HHhCCCEEECCCc
Confidence            998765 5778999999 45668999999999999999999999999999 788887777776544 7899999998877


Q ss_pred             HHH---HHHhcC--CccEEEEcCCCcccHHHHHhccccCCEEEEecCCCCCcccChHHHHhCCcEEEecccCCHHHHHHH
Q 018067          238 QDE---MQAAMG--TMDGIIDTVSAVHPLMPLIGLLKSQGKLVLVGAPEKPLELPAFSLLMGRKIVGGSMIGGMKETQEM  312 (361)
Q Consensus       238 ~~~---~~~~~~--g~d~vid~~g~~~~~~~~~~~l~~~G~~v~~g~~~~~~~~~~~~~~~~~~~i~g~~~~~~~~~~~~  312 (361)
                      .+.   +.+...  ++|++||++|....+..++++++++|+++.+|.......++...++.++++|.|+.....++++++
T Consensus       227 ~~~~~~l~~~~~~~~~d~vid~~g~~~~~~~~~~~l~~~G~~v~~g~~~~~~~~~~~~~~~~~~~i~g~~~~~~~~~~~~  306 (351)
T cd08233         227 VDVVAEVRKLTGGGGVDVSFDCAGVQATLDTAIDALRPRGTAVNVAIWEKPISFNPNDLVLKEKTLTGSICYTREDFEEV  306 (351)
T ss_pred             cCHHHHHHHHhCCCCCCEEEECCCCHHHHHHHHHhccCCCEEEEEccCCCCCccCHHHHHhhCcEEEEEeccCcchHHHH
Confidence            543   333333  599999999976668999999999999999998765567777788889999999887777899999


Q ss_pred             HHHHHcCCCce--eE-EEEecccH-HHHHHHHHcCCCc-eEEEE
Q 018067          313 IDFAAKHNIRA--DI-EVIPADYV-NTALERLAKADVR-YRFVI  351 (361)
Q Consensus       313 ~~ll~~~~~~~--~~-~~~~l~~~-~~a~~~~~~~~~~-gkvvi  351 (361)
                      +++++++++++  .+ ++|+++|+ ++|++.+.+++.. ||++|
T Consensus       307 ~~~~~~g~l~~~~~i~~~~~l~e~~~~a~~~~~~~~~~~~k~v~  350 (351)
T cd08233         307 IDLLASGKIDAEPLITSRIPLEDIVEKGFEELINDKEQHVKILV  350 (351)
T ss_pred             HHHHHcCCCChHHheEEEecHHHHHHHHHHHHHhCCCCceEEEe
Confidence            99999999964  34 79999996 7999999999975 99987

(2R,3R)-2,3-butanediol dehydrogenase, a zinc-dependent medium chain alcohol dehydrogenase, catalyzes the NAD(+)-dependent oxidation of (2R,3R)-2,3-butanediol and meso-butanediol to acetoin. BDH functions as a homodimer. NAD(P)(H)-dependent oxidoreductases are the major enzymes in the interconversion of alcohols and aldehydes, or ketones. The medium chain alcohol dehydrogenase family (MDR) have a NAD(P)(H)-binding domain in a Rossmann fold of a beta-alpha form. The N-terminal region typically has an all-beta catalytic domain. These proteins typically form dimers (typically higher plants, mammals) or tetramers (yeast, bacteria), and have 2 tightly bound zinc atoms per subunit. Sorbitol and aldose reductase are NAD(+) binding proteins of the polyol pathway, which interconverts glucose and fructose. Sorbitol dehydrogenase is tetrameric and has a single catalytic zinc per subunit.

>TIGR01202 bchC 2-desacetyl-2-hydroxyethyl bacteriochlorophyllide A dehydrogenase

Probab=100.00  E-value=4.8e-45  Score=335.18  Aligned_cols=300  Identities=18%  Similarity=0.209  Sum_probs=239.2

Q ss_pred             cceeeeeecCCCCCccceeeccCCCCCCeEEEEEeeeccC-cchHHhHhcCCCC---CCCCCcccccccEEEEEeCCCCC
Q 018067           11 KNAFGWAAKDTSGVLSPFHFSRRATGEKDVTFKVTHCGIC-HSDLHMIKNEWGN---TIYPIVPGHEIVGVVTEVGSKVS   86 (361)
Q Consensus        11 ~~~~~~~~~~~~~~l~~~~~~~p~~~~~evlV~v~~~~i~-~~D~~~~~g~~~~---~~~p~~lG~e~~G~Vv~vG~~v~   86 (361)
                      |+++.+   .+|+.+++++++.|+|+++||||||+++||| ++|++.++|..+.   ..+|.++|||++|+|+++|+++ 
T Consensus         2 ~ka~~~---~~~~~l~~~e~~~p~~~~~evlVkv~~~gi~~~~D~~~~~G~~~~~~~~~~P~i~GhE~~G~V~~vG~~v-   77 (308)
T TIGR01202         2 TQAIVL---SGPNQIELREVTLTPPSPGDLVVEIWYSGISTGTEKLFWNGLMPPFPGMGYPLVPGYESVGRVVEAGPDT-   77 (308)
T ss_pred             ceEEEE---eCCCeEEEEEecCCCCCCCeEEEEEEEEeeccCchhHHhcCCCCCCCCCCCCccCcceeEEEEEEecCCC-
Confidence            344444   3577899999999999999999999999996 7999988887543   2579999999999999999998 


Q ss_pred             CCCCCCEEEeccccCCCCCCcccccCCCCCCcchhcccccccCCCCcCCCcceeEEeecCCceEECCCCCCcccccccch
Q 018067           87 KFKVGDKVGVGCMVGSCRSCDSCAIDLENYCPKVIMTYANKYHDGTITYGGYSDIMVADEHFVVRIPEGTPLDATAPLLC  166 (361)
Q Consensus        87 ~~~~GdrV~~~~~~~~c~~c~~c~~~~~~~c~~~~~~~~~~~~~~~~~~g~~a~~v~v~~~~~~~ip~~~~~~~aa~l~~  166 (361)
                      +|++||||++.     |..|.+|..                     ...|+|+||+.++.+.++++|++++++. +.+ .
T Consensus        78 ~~~vGdrV~~~-----~~~c~~~~~---------------------~~~G~~aey~~v~~~~~~~ip~~~~~~~-a~~-~  129 (308)
T TIGR01202        78 GFRPGDRVFVP-----GSNCYEDVR---------------------GLFGGASKRLVTPASRVCRLDPALGPQG-ALL-A  129 (308)
T ss_pred             CCCCCCEEEEe-----Ccccccccc---------------------ccCCcccceEEcCHHHceeCCCCCCHHH-Hhh-h
Confidence            59999999862     334433221                     1359999999999999999999998864 444 3


Q ss_pred             hhhhhhhHhhhcCCCCCCCEEEEEcCChHHHHHHHHHHHcCCeEEEEeCCchhHHHHHHHcCCCEEecCCCHHHHHHhcC
Q 018067          167 AGITVYSPLRFYGLDKPGMHVGVVGLGGLGHVAVKFAKAMGVKVTVISTSPSKKSEAIERLGADSFLVSRDQDEMQAAMG  246 (361)
Q Consensus       167 ~~~ta~~~l~~~~~~~~g~~vlV~Gag~vG~~a~~la~~~g~~vi~~~~~~~~~~~~~~~~g~~~vv~~~~~~~~~~~~~  246 (361)
                      .+.+||+++.+.  ..++++++|+|+|++|++++|+|+++|++++++.+..+.+...+..   ..++++.+.     ...
T Consensus       130 ~~~~a~~~~~~~--~~~~~~vlV~G~G~vG~~a~q~ak~~G~~~v~~~~~~~~rl~~a~~---~~~i~~~~~-----~~~  199 (308)
T TIGR01202       130 LAATARHAVAGA--EVKVLPDLIVGHGTLGRLLARLTKAAGGSPPAVWETNPRRRDGATG---YEVLDPEKD-----PRR  199 (308)
T ss_pred             HHHHHHHHHHhc--ccCCCcEEEECCCHHHHHHHHHHHHcCCceEEEeCCCHHHHHhhhh---ccccChhhc-----cCC
Confidence            578999999764  2468899999999999999999999999755544433333333333   334444321     234


Q ss_pred             CccEEEEcCCCcccHHHHHhccccCCEEEEecCCCCCcccChHHHHhCCcEEEecccCCHHHHHHHHHHHHcCCCcee--
Q 018067          247 TMDGIIDTVSAVHPLMPLIGLLKSQGKLVLVGAPEKPLELPAFSLLMGRKIVGGSMIGGMKETQEMIDFAAKHNIRAD--  324 (361)
Q Consensus       247 g~d~vid~~g~~~~~~~~~~~l~~~G~~v~~g~~~~~~~~~~~~~~~~~~~i~g~~~~~~~~~~~~~~ll~~~~~~~~--  324 (361)
                      ++|++||++|+..+++.++++++++|+++.+|.......++...++.|++++.++.....++++++++++++|++++.  
T Consensus       200 g~Dvvid~~G~~~~~~~~~~~l~~~G~iv~~G~~~~~~~~~~~~~~~~~~~i~~~~~~~~~~~~~~~~l~~~g~i~~~~~  279 (308)
T TIGR01202       200 DYRAIYDASGDPSLIDTLVRRLAKGGEIVLAGFYTEPVNFDFVPAFMKEARLRIAAEWQPGDLHAVRELIESGALSLDGL  279 (308)
T ss_pred             CCCEEEECCCCHHHHHHHHHhhhcCcEEEEEeecCCCcccccchhhhcceEEEEecccchhHHHHHHHHHHcCCCChhhc
Confidence            799999999998768999999999999999998665556666677789999999888778889999999999999863  


Q ss_pred             E-EEEecccHHHHHHHHHcCCCceEEEEE
Q 018067          325 I-EVIPADYVNTALERLAKADVRYRFVID  352 (361)
Q Consensus       325 ~-~~~~l~~~~~a~~~~~~~~~~gkvvi~  352 (361)
                      + ++|||+|+++||+.+.++...+|++++
T Consensus       280 it~~~~l~~~~~A~~~~~~~~~~~Kv~~~  308 (308)
T TIGR01202       280 ITHQRPASDAAEAYMTAFSDPDCLKMILD  308 (308)
T ss_pred             cceeecHHHHHHHHHHHhcCcCceEEEeC
Confidence            4 899999999999998877667999874

>PRK10083 putative oxidoreductase; Provisional

Probab=100.00  E-value=5.5e-44  Score=332.93  Aligned_cols=331  Identities=21%  Similarity=0.273  Sum_probs=268.7

Q ss_pred             cceeeeeecCCCCCccceeeccCCCCCCeEEEEEeeeccCcchHHhHhcCCCCCCCCCcccccccEEEEEeCCCCCCCCC
Q 018067           11 KNAFGWAAKDTSGVLSPFHFSRRATGEKDVTFKVTHCGICHSDLHMIKNEWGNTIYPIVPGHEIVGVVTEVGSKVSKFKV   90 (361)
Q Consensus        11 ~~~~~~~~~~~~~~l~~~~~~~p~~~~~evlV~v~~~~i~~~D~~~~~g~~~~~~~p~~lG~e~~G~Vv~vG~~v~~~~~   90 (361)
                      |+++.+.   +|+.+++++++.|.++++|++||+.++++|++|++.+.|..+...+|.++|||++|+|+++|+++..|++
T Consensus         1 m~a~~~~---~~~~~~~~~~~~p~~~~~~vlV~v~~~gi~~~d~~~~~g~~~~~~~p~i~G~e~~G~V~~vG~~v~~~~~   77 (339)
T PRK10083          1 MKSIVIE---KPNSLAIEERPIPQPAAGEVRVKVKLAGICGSDSHIYRGHNPFAKYPRVIGHEFFGVIDAVGEGVDAARI   77 (339)
T ss_pred             CeEEEEe---cCCeeEEEeccCCCCCCCeEEEEEEEEEEcccchHHHcCCCCcCCCCcccccceEEEEEEECCCCccCCC
Confidence            4555553   4667889999999999999999999999999999998887654467899999999999999999999999


Q ss_pred             CCEEEeccccCCCCCCcccccCCCCCCcchhcccccccCCCCcCCCcceeEEeecCCceEECCCCCCcccccccchhhhh
Q 018067           91 GDKVGVGCMVGSCRSCDSCAIDLENYCPKVIMTYANKYHDGTITYGGYSDIMVADEHFVVRIPEGTPLDATAPLLCAGIT  170 (361)
Q Consensus        91 GdrV~~~~~~~~c~~c~~c~~~~~~~c~~~~~~~~~~~~~~~~~~g~~a~~v~v~~~~~~~ip~~~~~~~aa~l~~~~~t  170 (361)
                      ||+|++.+.. +|+.|.+|.++++++|.+..+.       +....|+|+||+.++.+.++++|+++++++++ +...+.+
T Consensus        78 Gd~V~~~~~~-~~~~~~~~~~~~~~~~~~~~~~-------~~~~~g~~~~~~~~~~~~~~~ip~~~~~~~a~-~~~~~~~  148 (339)
T PRK10083         78 GERVAVDPVI-SCGHCYPCSIGKPNVCTSLVVL-------GVHRDGGFSEYAVVPAKNAHRIPDAIADQYAV-MVEPFTI  148 (339)
T ss_pred             CCEEEEcccc-CCCCCccccCcCcccCCCCceE-------EEccCCcceeeEEechHHeEECcCCCCHHHHh-hhchHHH
Confidence            9999887766 7999999999999999865431       22346999999999999999999999998876 5566777


Q ss_pred             hhhHhhhcCCCCCCCEEEEEcCChHHHHHHHHHHH-cCCeEEEEeCCchhHHHHHHHcCCCEEecCCCHHHHHHhcC---
Q 018067          171 VYSPLRFYGLDKPGMHVGVVGLGGLGHVAVKFAKA-MGVKVTVISTSPSKKSEAIERLGADSFLVSRDQDEMQAAMG---  246 (361)
Q Consensus       171 a~~~l~~~~~~~~g~~vlV~Gag~vG~~a~~la~~-~g~~vi~~~~~~~~~~~~~~~~g~~~vv~~~~~~~~~~~~~---  246 (361)
                      +|.++ ...++++|++|+|+|+|.+|++++|+|+. +|++++++++..+.+.++++++|++.++++++.+..+.+.+   
T Consensus       149 a~~~~-~~~~~~~g~~vlI~g~g~vG~~~~~~a~~~~G~~~v~~~~~~~~~~~~~~~~Ga~~~i~~~~~~~~~~~~~~g~  227 (339)
T PRK10083        149 AANVT-GRTGPTEQDVALIYGAGPVGLTIVQVLKGVYNVKAVIVADRIDERLALAKESGADWVINNAQEPLGEALEEKGI  227 (339)
T ss_pred             HHHHH-HhcCCCCCCEEEEECCCHHHHHHHHHHHHhCCCCEEEEEcCCHHHHHHHHHhCCcEEecCccccHHHHHhcCCC
Confidence            88544 45678999999999999999999999996 69965444444444456668999999988876544343332   


Q ss_pred             CccEEEEcCCCcccHHHHHhccccCCEEEEecCCCCCcccChHHHHhCCcEEEecccCCHHHHHHHHHHHHcCCCce---
Q 018067          247 TMDGIIDTVSAVHPLMPLIGLLKSQGKLVLVGAPEKPLELPAFSLLMGRKIVGGSMIGGMKETQEMIDFAAKHNIRA---  323 (361)
Q Consensus       247 g~d~vid~~g~~~~~~~~~~~l~~~G~~v~~g~~~~~~~~~~~~~~~~~~~i~g~~~~~~~~~~~~~~ll~~~~~~~---  323 (361)
                      ++|++||++|+...+..++++++++|+++.+|..+....+....+..+++++.++.. ..+.++++++++.++++++   
T Consensus       228 ~~d~vid~~g~~~~~~~~~~~l~~~G~~v~~g~~~~~~~~~~~~~~~~~~~~~~~~~-~~~~~~~~~~~~~~g~l~~~~~  306 (339)
T PRK10083        228 KPTLIIDAACHPSILEEAVTLASPAARIVLMGFSSEPSEIVQQGITGKELSIFSSRL-NANKFPVVIDWLSKGLIDPEKL  306 (339)
T ss_pred             CCCEEEECCCCHHHHHHHHHHhhcCCEEEEEccCCCCceecHHHHhhcceEEEEEec-ChhhHHHHHHHHHcCCCChHHh
Confidence            467999999976668999999999999999997654334444455568888888764 4567999999999999987   


Q ss_pred             eEEEEecccHHHHHHHHHcCC-CceEEEEEeCC
Q 018067          324 DIEVIPADYVNTALERLAKAD-VRYRFVIDVAN  355 (361)
Q Consensus       324 ~~~~~~l~~~~~a~~~~~~~~-~~gkvvi~~~~  355 (361)
                      ..+.|+++++++|++.+.+++ ..+|+++.+.+
T Consensus       307 ~~~~~~l~~~~~a~~~~~~~~~~~~kvvv~~~~  339 (339)
T PRK10083        307 ITHTFDFQHVADAIELFEKDQRHCCKVLLTFAE  339 (339)
T ss_pred             eeeeecHHHHHHHHHHHhcCCCceEEEEEecCC
Confidence            338999999999999998654 45999998753

>cd08238 sorbose_phosphate_red L-sorbose-1-phosphate reductase

Probab=100.00  E-value=1.3e-43  Score=337.94  Aligned_cols=325  Identities=19%  Similarity=0.274  Sum_probs=255.7

Q ss_pred             cceeeeeecCCCCCccceeeccCCCCCCeEEEEEeeeccCcchHHhH-hcCCC-C-----CCCCCcccccccEEEEEeCC
Q 018067           11 KNAFGWAAKDTSGVLSPFHFSRRATGEKDVTFKVTHCGICHSDLHMI-KNEWG-N-----TIYPIVPGHEIVGVVTEVGS   83 (361)
Q Consensus        11 ~~~~~~~~~~~~~~l~~~~~~~p~~~~~evlV~v~~~~i~~~D~~~~-~g~~~-~-----~~~p~~lG~e~~G~Vv~vG~   83 (361)
                      |++.++..+ +|+.++++++|.|+++++||+|||+++|||++|++.+ .|... .     ..+|+++|||++|+|+++|+
T Consensus         1 m~~~a~~~~-~~~~l~~~e~p~P~~~~~eVlVkV~a~gic~sD~~~~~~g~~~~~~~~~~~~~p~i~GhE~~G~V~~vG~   79 (410)
T cd08238           1 MKTKAWRMY-GKGDLRLEKFELPEIADDEILVRVISDSLCFSTWKLALQGSDHKKVPNDLAKEPVILGHEFAGTILKVGK   79 (410)
T ss_pred             CCcEEEEEE-cCCceEEEecCCCCCCCCeEEEEEEEeccCCCCHHHHhcCCccccCcccccCCCceeccccEEEEEEeCC
Confidence            445555554 4567999999999999999999999999999999976 44321 1     24688999999999999999


Q ss_pred             CCC-CCCCCCEEEeccccCCCCCCcccccCCCCCCcchhcccccccCCCCcCCCcceeEEeecCC----ceEECCCCCCc
Q 018067           84 KVS-KFKVGDKVGVGCMVGSCRSCDSCAIDLENYCPKVIMTYANKYHDGTITYGGYSDIMVADEH----FVVRIPEGTPL  158 (361)
Q Consensus        84 ~v~-~~~~GdrV~~~~~~~~c~~c~~c~~~~~~~c~~~~~~~~~~~~~~~~~~g~~a~~v~v~~~----~~~~ip~~~~~  158 (361)
                      +++ +|++||||++.+.. .|++|..|..        .          +....|+|+||+.++.+    .++++|+++++
T Consensus        80 ~v~~~~~vGdrV~~~~~~-~c~~~~~c~~--------~----------g~~~~G~~aey~~v~~~~~~~~~~~lP~~l~~  140 (410)
T cd08238          80 KWQGKYKPGQRFVIQPAL-ILPDGPSCPG--------Y----------SYTYPGGLATYHIIPNEVMEQDCLLIYEGDGY  140 (410)
T ss_pred             CccCCCCCCCEEEEcCCc-CCCCCCCCCC--------c----------cccCCCcceEEEEecHHhccCCeEECCCCCCH
Confidence            998 69999999887654 7888887721        0          22357999999999986    68999999999


Q ss_pred             cccccc-c--hhhhhhhhHh--------hhcCCCCCCCEEEEEcC-ChHHHHHHHHHHHcCC---eEEEEeCCchhHHHH
Q 018067          159 DATAPL-L--CAGITVYSPL--------RFYGLDKPGMHVGVVGL-GGLGHVAVKFAKAMGV---KVTVISTSPSKKSEA  223 (361)
Q Consensus       159 ~~aa~l-~--~~~~ta~~~l--------~~~~~~~~g~~vlV~Ga-g~vG~~a~~la~~~g~---~vi~~~~~~~~~~~~  223 (361)
                      ++|+.+ +  +. .+++.++        .....+++|++|+|+|+ |++|++++|+|+.+|+   +|++++.+++++..+
T Consensus       141 ~~aal~epl~~~-~~~~~a~~~~~~~~~~~~~~~~~g~~VlV~G~~G~vG~~aiq~ak~~G~g~~~Vi~~~~~~~r~~~a  219 (410)
T cd08238         141 AEASLVEPLSCV-IGAYTANYHLQPGEYRHRMGIKPGGNTAILGGAGPMGLMAIDYAIHGPIGPSLLVVTDVNDERLARA  219 (410)
T ss_pred             HHHhhcchHHHH-HHHhhhcccccccchhhhcCCCCCCEEEEEeCCCHHHHHHHHHHHhcccCCceEEEEcCCHHHHHHH
Confidence            988744 2  22 2233332        23456799999999985 9999999999999864   788888888776555


Q ss_pred             HHHc--------CCC-EEecCCC-HH---HHHHhcC--CccEEEEcCCCcccHHHHHhccccCCEEEEecCC-CC--Ccc
Q 018067          224 IERL--------GAD-SFLVSRD-QD---EMQAAMG--TMDGIIDTVSAVHPLMPLIGLLKSQGKLVLVGAP-EK--PLE  285 (361)
Q Consensus       224 ~~~~--------g~~-~vv~~~~-~~---~~~~~~~--g~d~vid~~g~~~~~~~~~~~l~~~G~~v~~g~~-~~--~~~  285 (361)
                       +++        |++ .++++++ ++   .+.++++  ++|++||++|...++..++++++++|+++.++.. ..  ...
T Consensus       220 -~~~~~~~~~~~Ga~~~~i~~~~~~~~~~~v~~~t~g~g~D~vid~~g~~~~~~~a~~~l~~~G~~v~~~g~~~~~~~~~  298 (410)
T cd08238         220 -QRLFPPEAASRGIELLYVNPATIDDLHATLMELTGGQGFDDVFVFVPVPELVEEADTLLAPDGCLNFFAGPVDKNFSAP  298 (410)
T ss_pred             -HHhccccccccCceEEEECCCccccHHHHHHHHhCCCCCCEEEEcCCCHHHHHHHHHHhccCCeEEEEEccCCCCcccc
Confidence             665        665 5677643 22   3444443  7999999999877799999999999998877542 22  245


Q ss_pred             cChHHHHhCCcEEEecccCCHHHHHHHHHHHHcCCCcee--E-EEEecccHHHHHHHHHcCCCceEEEEEeCCccc
Q 018067          286 LPAFSLLMGRKIVGGSMIGGMKETQEMIDFAAKHNIRAD--I-EVIPADYVNTALERLAKADVRYRFVIDVANTMK  358 (361)
Q Consensus       286 ~~~~~~~~~~~~i~g~~~~~~~~~~~~~~ll~~~~~~~~--~-~~~~l~~~~~a~~~~~~~~~~gkvvi~~~~~~~  358 (361)
                      ++...++.+++++.|+.....++++++++++.+|++++.  + ++|+|+++++||+.+. ++..||+|+.++...+
T Consensus       299 ~~~~~~~~~~~~i~g~~~~~~~~~~~~~~li~~g~i~~~~~it~~~~l~~~~~A~~~~~-~~~~gKvvl~~~~~~~  373 (410)
T cd08238         299 LNFYNVHYNNTHYVGTSGGNTDDMKEAIDLMAAGKLNPARMVTHIGGLNAAAETTLNLP-GIPGGKKLIYTQKPLP  373 (410)
T ss_pred             ccHHHhhhcCcEEEEeCCCCHHHHHHHHHHHHcCCCchhhcEEEEecHHHHHHHHHHhh-ccCCceEEEECCCCCC
Confidence            677788889999999988888899999999999999873  4 8999999999999999 6677999999875543

L-sorbose-1-phosphate reductase, a member of the MDR family, catalyzes the NADPH-dependent conversion of l-sorbose 1-phosphate to d-glucitol 6-phosphate in the metabolism of L-sorbose to (also converts d-fructose 1-phosphate to d-mannitol 6-phosphate). The medium chain dehydrogenases/reductase (MDR)/zinc-dependent alcohol dehydrogenase-like family, which contains the zinc-dependent alcohol dehydrogenase (ADH-Zn) and related proteins, is a diverse group of proteins related to the first identified member, class I mammalian ADH. MDRs display a broad range of activities and are distinguished from the smaller short chain dehydrogenases (~ 250 amino acids vs. the ~ 350 amino acids of the MDR). The MDR proteins have 2 domains: a C-terminal NAD(P) binding-Rossmann fold domain of an beta-alpha form and an N-terminal catalytic domain with distant homology to GroES. The MDR group contains a host of activities, including the found

>PRK09422 ethanol-active dehydrogenase/acetaldehyde-active reductase; Provisional

Probab=100.00  E-value=6.7e-43  Score=325.47  Aligned_cols=330  Identities=26%  Similarity=0.498  Sum_probs=278.7

Q ss_pred             cceeeeeecCCCCCcc-ceeeccCCCCCCeEEEEEeeeccCcchHHhHhcCCCCCCCCCcccccccEEEEEeCCCCCCCC
Q 018067           11 KNAFGWAAKDTSGVLS-PFHFSRRATGEKDVTFKVTHCGICHSDLHMIKNEWGNTIYPIVPGHEIVGVVTEVGSKVSKFK   89 (361)
Q Consensus        11 ~~~~~~~~~~~~~~l~-~~~~~~p~~~~~evlV~v~~~~i~~~D~~~~~g~~~~~~~p~~lG~e~~G~Vv~vG~~v~~~~   89 (361)
                      |+++.+...   +... ++++|.|++.++|++|||+++++|++|++.+.|..+. ..|.++|||++|+|+++|++++.|+
T Consensus         1 mka~~~~~~---~~~~~~~~~~~p~~~~~evlv~v~~~~i~~~d~~~~~g~~~~-~~~~~~g~e~~G~V~~~G~~v~~~~   76 (338)
T PRK09422          1 MKAAVVNKD---HTGDVVVEKTLRPLKHGEALVKMEYCGVCHTDLHVANGDFGD-KTGRILGHEGIGIVKEVGPGVTSLK   76 (338)
T ss_pred             CeEEEecCC---CCCceEEEecCCCCCCCeEEEEEEEEeechhHHHHHcCCCCC-CCCccCCcccceEEEEECCCCccCC
Confidence            566666443   3334 7889999999999999999999999999988876543 3467899999999999999999999


Q ss_pred             CCCEEEeccccCCCCCCcccccCCCCCCcchhcccccccCCCCcCCCcceeEEeecCCceEECCCCCCcccccccchhhh
Q 018067           90 VGDKVGVGCMVGSCRSCDSCAIDLENYCPKVIMTYANKYHDGTITYGGYSDIMVADEHFVVRIPEGTPLDATAPLLCAGI  169 (361)
Q Consensus        90 ~GdrV~~~~~~~~c~~c~~c~~~~~~~c~~~~~~~~~~~~~~~~~~g~~a~~v~v~~~~~~~ip~~~~~~~aa~l~~~~~  169 (361)
                      +||+|++.++..+|+.|.+|..+..+.|.+...       .+....|+|++|+.++.++++++|+++++.+++.+++.+.
T Consensus        77 ~Gd~V~~~~~~~~~~~~~~~~~~~~~~~~~~~~-------~~~~~~g~~~~~~~v~~~~~~~~p~~~~~~~aa~l~~~~~  149 (338)
T PRK09422         77 VGDRVSIAWFFEGCGHCEYCTTGRETLCRSVKN-------AGYTVDGGMAEQCIVTADYAVKVPEGLDPAQASSITCAGV  149 (338)
T ss_pred             CCCEEEEccCCCCCCCChhhcCCCcccCCCccc-------cCccccCcceeEEEEchHHeEeCCCCCCHHHeehhhcchh
Confidence            999999888888999999999999999987632       1334579999999999999999999999999999999999


Q ss_pred             hhhhHhhhcCCCCCCCEEEEEcCChHHHHHHHHHHH-cCCeEEEEeCCchhHHHHHHHcCCCEEecCCC-H---HHHHHh
Q 018067          170 TVYSPLRFYGLDKPGMHVGVVGLGGLGHVAVKFAKA-MGVKVTVISTSPSKKSEAIERLGADSFLVSRD-Q---DEMQAA  244 (361)
Q Consensus       170 ta~~~l~~~~~~~~g~~vlV~Gag~vG~~a~~la~~-~g~~vi~~~~~~~~~~~~~~~~g~~~vv~~~~-~---~~~~~~  244 (361)
                      |||+++ ....+++|++|||+|+|++|++++++|+. .|++|+++++++++++.+ +++|++.+++++. .   +.+...
T Consensus       150 ta~~~~-~~~~~~~g~~vlV~g~g~vG~~~~~la~~~~g~~v~~~~~~~~~~~~~-~~~g~~~v~~~~~~~~~~~~v~~~  227 (338)
T PRK09422        150 TTYKAI-KVSGIKPGQWIAIYGAGGLGNLALQYAKNVFNAKVIAVDINDDKLALA-KEVGADLTINSKRVEDVAKIIQEK  227 (338)
T ss_pred             HHHHHH-HhcCCCCCCEEEEECCcHHHHHHHHHHHHhCCCeEEEEeCChHHHHHH-HHcCCcEEecccccccHHHHHHHh
Confidence            999998 45668999999999999999999999998 599999999988887666 8899998888754 2   334445


Q ss_pred             cCCccEEEEcCCCcccHHHHHhccccCCEEEEecCCCCCcccChHHHHhCCcEEEecccCCHHHHHHHHHHHHcCCCcee
Q 018067          245 MGTMDGIIDTVSAVHPLMPLIGLLKSQGKLVLVGAPEKPLELPAFSLLMGRKIVGGSMIGGMKETQEMIDFAAKHNIRAD  324 (361)
Q Consensus       245 ~~g~d~vid~~g~~~~~~~~~~~l~~~G~~v~~g~~~~~~~~~~~~~~~~~~~i~g~~~~~~~~~~~~~~ll~~~~~~~~  324 (361)
                      .+++|.+|++.++...+..++++++++|+++.+|.......++...+..++.++.++.....++++.+++++.++++.+.
T Consensus       228 ~~~~d~vi~~~~~~~~~~~~~~~l~~~G~~v~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~g~l~~~  307 (338)
T PRK09422        228 TGGAHAAVVTAVAKAAFNQAVDAVRAGGRVVAVGLPPESMDLSIPRLVLDGIEVVGSLVGTRQDLEEAFQFGAEGKVVPK  307 (338)
T ss_pred             cCCCcEEEEeCCCHHHHHHHHHhccCCCEEEEEeeCCCCceecHHHHhhcCcEEEEecCCCHHHHHHHHHHHHhCCCCcc
Confidence            56889555555555558999999999999999987654455566666778899988876677889999999999998876


Q ss_pred             EEEEecccHHHHHHHHHcCCCceEEEEEe
Q 018067          325 IEVIPADYVNTALERLAKADVRYRFVIDV  353 (361)
Q Consensus       325 ~~~~~l~~~~~a~~~~~~~~~~gkvvi~~  353 (361)
                      ++.++++++++||+.+.+++..||+++.+
T Consensus       308 v~~~~~~~~~~a~~~~~~~~~~gkvvv~~  336 (338)
T PRK09422        308 VQLRPLEDINDIFDEMEQGKIQGRMVIDF  336 (338)
T ss_pred             EEEEcHHHHHHHHHHHHcCCccceEEEec
Confidence            77799999999999999999889999864

>cd08299 alcohol_DH_class_I_II_IV class I, II, IV alcohol dehydrogenases

Probab=100.00  E-value=7.7e-43  Score=328.80  Aligned_cols=338  Identities=24%  Similarity=0.365  Sum_probs=269.7

Q ss_pred             cccceeeeeecCCCCCccceeeccCCCCCCeEEEEEeeeccCcchHHhHhcCCCCCCCCCcccccccEEEEEeCCCCCCC
Q 018067            9 HPKNAFGWAAKDTSGVLSPFHFSRRATGEKDVTFKVTHCGICHSDLHMIKNEWGNTIYPIVPGHEIVGVVTEVGSKVSKF   88 (361)
Q Consensus         9 ~~~~~~~~~~~~~~~~l~~~~~~~p~~~~~evlV~v~~~~i~~~D~~~~~g~~~~~~~p~~lG~e~~G~Vv~vG~~v~~~   88 (361)
                      ++|++..+  ...++.++++++|.|++.++||+||++++|+|++|++.+.|... ..+|.++|||++|+|+++|++++.|
T Consensus         6 ~~~~a~~~--~~~~~~~~l~~~p~p~~~~~~vlvkv~~~gi~~~D~~~~~g~~~-~~~p~v~G~e~~G~V~~vG~~v~~~   82 (373)
T cd08299           6 IKCKAAVL--WEPKKPFSIEEIEVAPPKAHEVRIKIVATGICRSDDHVVSGKLV-TPFPVILGHEAAGIVESVGEGVTTV   82 (373)
T ss_pred             ceeEEEEE--ecCCCCcEEEEeecCCCCCCEEEEEEEEEEcCcccHHHhcCCCC-CCCCccccccceEEEEEeCCCCccC
Confidence            34555544  34566688999999999999999999999999999999988763 3578899999999999999999999


Q ss_pred             CCCCEEEeccccCCCCCCcccccCCCCCCcchhccc-ccccCC-------------CCcCCCcceeEEeecCCceEECCC
Q 018067           89 KVGDKVGVGCMVGSCRSCDSCAIDLENYCPKVIMTY-ANKYHD-------------GTITYGGYSDIMVADEHFVVRIPE  154 (361)
Q Consensus        89 ~~GdrV~~~~~~~~c~~c~~c~~~~~~~c~~~~~~~-~~~~~~-------------~~~~~g~~a~~v~v~~~~~~~ip~  154 (361)
                      ++||||++.+ ..+||+|.+|++++++.|+.....- .+....             .....|+|+||++++.+.++++|+
T Consensus        83 ~~Gd~V~~~~-~~~c~~c~~c~~~~~~~c~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~G~~~e~~~v~~~~~~~lP~  161 (373)
T cd08299          83 KPGDKVIPLF-VPQCGKCRACLNPESNLCLKNDLGKPQGLMQDGTSRFTCKGKPIHHFLGTSTFSEYTVVDEIAVAKIDA  161 (373)
T ss_pred             CCCCEEEECC-CCCCCCChhhhCCCcccCcCcccccccccccCCccccccCCcccccccCCCcccceEEecccceeeCCC
Confidence            9999998765 5699999999999999999754310 011100             111368999999999999999999


Q ss_pred             CCCcccccccchhhhhhhhHhhhcCCCCCCCEEEEEcCChHHHHHHHHHHHcCC-eEEEEeCCchhHHHHHHHcCCCEEe
Q 018067          155 GTPLDATAPLLCAGITVYSPLRFYGLDKPGMHVGVVGLGGLGHVAVKFAKAMGV-KVTVISTSPSKKSEAIERLGADSFL  233 (361)
Q Consensus       155 ~~~~~~aa~l~~~~~ta~~~l~~~~~~~~g~~vlV~Gag~vG~~a~~la~~~g~-~vi~~~~~~~~~~~~~~~~g~~~vv  233 (361)
                      ++++++++.+.+++.+||+++...+.+++|++|+|+|+|++|++++++|+..|+ +|++++++++++..+ +++|++.++
T Consensus       162 ~l~~~~aa~~~~~~~ta~~~~~~~~~~~~g~~VlV~G~g~vG~~~~~~a~~~G~~~Vi~~~~~~~~~~~a-~~lGa~~~i  240 (373)
T cd08299         162 AAPLEKVCLIGCGFSTGYGAAVNTAKVTPGSTCAVFGLGGVGLSAIMGCKAAGASRIIAVDINKDKFAKA-KELGATECI  240 (373)
T ss_pred             CCChHHhheeccchHHHHHHHHhccCCCCCCEEEEECCCHHHHHHHHHHHHcCCCeEEEEcCCHHHHHHH-HHcCCceEe
Confidence            999999999999999999998777888999999999999999999999999999 799998888777666 889999888


Q ss_pred             cCCCH-----HHHHHhc-CCccEEEEcCCCcccHHHHHhcc-ccCCEEEEecCCCCC--cccChHHHHhCCcEEEecccC
Q 018067          234 VSRDQ-----DEMQAAM-GTMDGIIDTVSAVHPLMPLIGLL-KSQGKLVLVGAPEKP--LELPAFSLLMGRKIVGGSMIG  304 (361)
Q Consensus       234 ~~~~~-----~~~~~~~-~g~d~vid~~g~~~~~~~~~~~l-~~~G~~v~~g~~~~~--~~~~~~~~~~~~~~i~g~~~~  304 (361)
                      +..+.     ..+.++. +++|++||++|++..+..++..+ +++|+++.+|.....  ..++... +.++.++.++...
T Consensus       241 ~~~~~~~~~~~~v~~~~~~~~d~vld~~g~~~~~~~~~~~~~~~~G~~v~~g~~~~~~~~~~~~~~-~~~~~~i~~~~~~  319 (373)
T cd08299         241 NPQDYKKPIQEVLTEMTDGGVDFSFEVIGRLDTMKAALASCHEGYGVSVIVGVPPSSQNLSINPML-LLTGRTWKGAVFG  319 (373)
T ss_pred             cccccchhHHHHHHHHhCCCCeEEEECCCCcHHHHHHHHhhccCCCEEEEEccCCCCceeecCHHH-HhcCCeEEEEEec
Confidence            86542     2233333 47999999999866677777765 579999999976432  3444432 3467788887664


Q ss_pred             CH---HHHHHHHHHHHcCCCce--eE-EEEecccHHHHHHHHHcCCCceEEEEEe
Q 018067          305 GM---KETQEMIDFAAKHNIRA--DI-EVIPADYVNTALERLAKADVRYRFVIDV  353 (361)
Q Consensus       305 ~~---~~~~~~~~ll~~~~~~~--~~-~~~~l~~~~~a~~~~~~~~~~gkvvi~~  353 (361)
                      ..   +++.++++.+.++.++.  .+ +.|+++++++||+.+.+++. .|+++.+
T Consensus       320 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~e~~~a~~~~~~~~~-~k~~~~~  373 (373)
T cd08299         320 GWKSKDSVPKLVADYMAKKFNLDPLITHTLPFEKINEGFDLLRSGKS-IRTVLTF  373 (373)
T ss_pred             CCccHHHHHHHHHHHHcCCCCchhheeeeecHHHHHHHHHHHhCCCc-ceEEEeC
Confidence            33   56777888777776543  34 89999999999999988774 5877753

NAD(P)(H)-dependent oxidoreductases are the major enzymes in the interconversion of alcohols and aldehydes or ketones. This group includes alcohol dehydrogenases corresponding to mammalian classes I, II, IV. Alcohol dehydrogenase in the liver converts ethanol and NAD+ to acetaldehyde and NADH, while in yeast and some other microorganisms ADH catalyzes the conversion acetaldehyde to ethanol in alcoholic fermentation. ADH is a member of the medium chain alcohol dehydrogenase family (MDR), which have a NAD(P)(H)-binding domain in a Rossmann fold of a beta-alpha form. The NAD(H)-binding region is comprised of 2 structurally similar halves, each of which contacts a mononucleotide. A GxGxxG motif after the first mononucleotide contact half allows the close contact of the coenzyme with the ADH backbone. The N-terminal catalytic domain has a distant homology to GroES. These proteins typically form dimers (typically

>cd08285 NADP_ADH NADP(H)-dependent alcohol dehydrogenases

Probab=100.00  E-value=6.1e-43  Score=327.46  Aligned_cols=333  Identities=20%  Similarity=0.256  Sum_probs=269.8

Q ss_pred             cceeeeeecCCCCCccceeeccCCCCCCeEEEEEeeeccCcchHHhHhcCCCCCCCCCcccccccEEEEEeCCCCCCCCC
Q 018067           11 KNAFGWAAKDTSGVLSPFHFSRRATGEKDVTFKVTHCGICHSDLHMIKNEWGNTIYPIVPGHEIVGVVTEVGSKVSKFKV   90 (361)
Q Consensus        11 ~~~~~~~~~~~~~~l~~~~~~~p~~~~~evlV~v~~~~i~~~D~~~~~g~~~~~~~p~~lG~e~~G~Vv~vG~~v~~~~~   90 (361)
                      |+++.+..   ++.+++++++.|.+.++||+|||.++++|++|++.+.+......+|.++|||++|+|+++|+++++|++
T Consensus         1 mka~~~~~---~~~~~l~~~~~p~~~~~evlIkv~a~~i~~~d~~~~~g~~~~~~~~~~~G~e~~G~V~~vG~~v~~~~~   77 (351)
T cd08285           1 MKAFAMLG---IGKVGWIEKPIPVCGPNDAIVRPTAVAPCTSDVHTVWGGAPGERHGMILGHEAVGVVEEVGSEVKDFKP   77 (351)
T ss_pred             CceEEEcc---CCccEEEECCCCCCCCCeEEEEEEEEEechhhHHHhcCCCCCCCCCcccCcceEEEEEEecCCcCccCC
Confidence            56777654   345778888999999999999999999999999988876554466889999999999999999999999


Q ss_pred             CCEEEeccccCCCCCCcccccCCCCCCcchhcccccccCCCCcCCCcceeEEeecCC--ceEECCCCCCcccccccchhh
Q 018067           91 GDKVGVGCMVGSCRSCDSCAIDLENYCPKVIMTYANKYHDGTITYGGYSDIMVADEH--FVVRIPEGTPLDATAPLLCAG  168 (361)
Q Consensus        91 GdrV~~~~~~~~c~~c~~c~~~~~~~c~~~~~~~~~~~~~~~~~~g~~a~~v~v~~~--~~~~ip~~~~~~~aa~l~~~~  168 (361)
                      ||+|++.+.. +|+.|..|..|+++.|.+...    ++..+....|+|+||+.++.+  .++++|+++++++++.++..+
T Consensus        78 Gd~V~~~~~~-~~~~c~~c~~g~~~~~~~~~~----~~~~~~~~~g~~~~y~~v~~~~~~~~~lP~~~~~~~aa~~~~~~  152 (351)
T cd08285          78 GDRVIVPAIT-PDWRSVAAQRGYPSQSGGMLG----GWKFSNFKDGVFAEYFHVNDADANLAPLPDGLTDEQAVMLPDMM  152 (351)
T ss_pred             CCEEEEcCcC-CCCCCHHHHCcCcccCcCCCC----CccccCCCCcceeEEEEcchhhCceEECCCCCCHHHhhhhccch
Confidence            9999886654 899999999999999987531    111123457999999999974  899999999999999999999


Q ss_pred             hhhhhHhhhcCCCCCCCEEEEEcCChHHHHHHHHHHHcCCe-EEEEeCCchhHHHHHHHcCCCEEecCCCHHH---HHHh
Q 018067          169 ITVYSPLRFYGLDKPGMHVGVVGLGGLGHVAVKFAKAMGVK-VTVISTSPSKKSEAIERLGADSFLVSRDQDE---MQAA  244 (361)
Q Consensus       169 ~ta~~~l~~~~~~~~g~~vlV~Gag~vG~~a~~la~~~g~~-vi~~~~~~~~~~~~~~~~g~~~vv~~~~~~~---~~~~  244 (361)
                      .+||+++. ...+++|++|||+|+|++|++++|+|+.+|+. ++++++++++ ..+++++|++.++++++.+.   +..+
T Consensus       153 ~ta~~~~~-~~~~~~g~~vlI~g~g~iG~~~~~lak~~G~~~v~~~~~~~~~-~~~~~~~g~~~~v~~~~~~~~~~i~~~  230 (351)
T cd08285         153 STGFHGAE-LANIKLGDTVAVFGIGPVGLMAVAGARLRGAGRIIAVGSRPNR-VELAKEYGATDIVDYKNGDVVEQILKL  230 (351)
T ss_pred             hhHHHHHH-ccCCCCCCEEEEECCCHHHHHHHHHHHHcCCCeEEEEeCCHHH-HHHHHHcCCceEecCCCCCHHHHHHHH
Confidence            99999975 45689999999998899999999999999995 6666666555 56668899999988766433   3333


Q ss_pred             c--CCccEEEEcCCCcccHHHHHhccccCCEEEEecCCCCC--cccCh--HHHHhCCcEEEecccC-CHHHHHHHHHHHH
Q 018067          245 M--GTMDGIIDTVSAVHPLMPLIGLLKSQGKLVLVGAPEKP--LELPA--FSLLMGRKIVGGSMIG-GMKETQEMIDFAA  317 (361)
Q Consensus       245 ~--~g~d~vid~~g~~~~~~~~~~~l~~~G~~v~~g~~~~~--~~~~~--~~~~~~~~~i~g~~~~-~~~~~~~~~~ll~  317 (361)
                      .  .++|++||++|+...+..++++++++|+++.+|.....  ..++.  +....+..++.+.... ..++++++++++.
T Consensus       231 ~~~~~~d~vld~~g~~~~~~~~~~~l~~~G~~v~~g~~~~~~~~~~~~~~~~~~~~~~~i~~~~~~~~~~~~~~~~~~~~  310 (351)
T cd08285         231 TGGKGVDAVIIAGGGQDTFEQALKVLKPGGTISNVNYYGEDDYLPIPREEWGVGMGHKTINGGLCPGGRLRMERLASLIE  310 (351)
T ss_pred             hCCCCCcEEEECCCCHHHHHHHHHHhhcCCEEEEecccCCCceeecChhhhhhhccccEEEEeecCCccccHHHHHHHHH
Confidence            3  36999999999876689999999999999999876532  23332  2233466777765543 3567899999999


Q ss_pred             cCCCce---eE-EEEecccHHHHHHHHHcCCC-ceEEEEEe
Q 018067          318 KHNIRA---DI-EVIPADYVNTALERLAKADV-RYRFVIDV  353 (361)
Q Consensus       318 ~~~~~~---~~-~~~~l~~~~~a~~~~~~~~~-~gkvvi~~  353 (361)
                      +|++++   .+ +.++++++++|++.+++++. ..|+++++
T Consensus       311 ~g~i~~~~~~~~~~~~l~~~~~a~~~~~~~~~~~~k~~~~~  351 (351)
T cd08285         311 YGRVDPSKLLTHHFFGFDDIEEALMLMKDKPDDLIKPVIIF  351 (351)
T ss_pred             cCCCChhhceeccccCHHHHHHHHHHHhcccCCeEEEEEeC
Confidence            999987   33 56999999999999999874 58999864

This group is predominated by atypical alcohol dehydrogenases; they exist as tetramers and exhibit specificity for NADP(H) as a cofactor in the interconversion of alcohols and aldehydes, or ketones. Like other zinc-dependent alcohol dehydrogenases (ADH) of the medium chain alcohol dehydrogenase/reductase family (MDR), tetrameric ADHs have a catalytic zinc that resides between the catalytic and NAD(H)binding domains; however, they do not have and a structural zinc in a lobe of the catalytic domain. The medium chain alcohol dehydrogenase family (MDR) has a NAD(P)(H)-binding domain in a Rossmann fold of a beta-alpha form. The N-terminal region typically has an all-beta catalytic domain. These proteins typically form dimers (typically higher plants, mammals) or tetramers (yeast, bacteria), and have 2 tightly bound zinc atoms per subunit.

>cd05284 arabinose_DH_like D-arabinose dehydrogenase

Probab=100.00  E-value=8.1e-43  Score=325.17  Aligned_cols=331  Identities=33%  Similarity=0.486  Sum_probs=281.1

Q ss_pred             cceeeeeecCCCCCccceeeccCCCCCCeEEEEEeeeccCcchHHhHhcCCC---CCCCCCcccccccEEEEEeCCCCCC
Q 018067           11 KNAFGWAAKDTSGVLSPFHFSRRATGEKDVTFKVTHCGICHSDLHMIKNEWG---NTIYPIVPGHEIVGVVTEVGSKVSK   87 (361)
Q Consensus        11 ~~~~~~~~~~~~~~l~~~~~~~p~~~~~evlV~v~~~~i~~~D~~~~~g~~~---~~~~p~~lG~e~~G~Vv~vG~~v~~   87 (361)
                      |+++.+...+  +.+++.+.+.|++++++++||+.++++|++|+....|.++   ...+|.++|||++|+|+++|+++..
T Consensus         1 ~ka~~~~~~~--~~~~~~~~~~~~~~~~~v~v~v~~~~i~~~d~~~~~g~~~~~~~~~~~~~~G~e~~G~V~~vG~~v~~   78 (340)
T cd05284           1 MKAARLYEYG--KPLRLEDVPVPEPGPGQVLVRVGGAGVCHSDLHVIDGVWGGILPYKLPFTLGHENAGWVEEVGSGVDG   78 (340)
T ss_pred             CeeeEeccCC--CCceEEeCCCCCCCCCeEEEEEEEEeecchhHHHHcCCCcccccCCCCeecccceeEEEEEeCCCCCc
Confidence            4566665432  4577888899999999999999999999999998887654   2356789999999999999999999


Q ss_pred             CCCCCEEEeccccCCCCCCcccccCCCCCCcchhcccccccCCCCcCCCcceeEEeecCCceEECCCCCCcccccccchh
Q 018067           88 FKVGDKVGVGCMVGSCRSCDSCAIDLENYCPKVIMTYANKYHDGTITYGGYSDIMVADEHFVVRIPEGTPLDATAPLLCA  167 (361)
Q Consensus        88 ~~~GdrV~~~~~~~~c~~c~~c~~~~~~~c~~~~~~~~~~~~~~~~~~g~~a~~v~v~~~~~~~ip~~~~~~~aa~l~~~  167 (361)
                      |++||||+..+.. +|+.|..|..|..++|.+..+.       +....|+|++|+.++.++++++|+++++++++.+++.
T Consensus        79 ~~~Gd~V~~~~~~-~~~~~~~~~~~~~~~~~~~~~~-------~~~~~g~~~~~~~v~~~~~~~~P~~ls~~~aa~l~~~  150 (340)
T cd05284          79 LKEGDPVVVHPPW-GCGTCRYCRRGEENYCENARFP-------GIGTDGGFAEYLLVPSRRLVKLPRGLDPVEAAPLADA  150 (340)
T ss_pred             CcCCCEEEEcCCC-CCCCChHHhCcCcccCCCCccc-------CccCCCcceeeEEecHHHeEECCCCCCHHHhhhhcch
Confidence            9999999876654 8999999999999999987543       3356799999999999999999999999999999999


Q ss_pred             hhhhhhHhhhc-CCCCCCCEEEEEcCChHHHHHHHHHHHcC-CeEEEEeCCchhHHHHHHHcCCCEEecCCCH--HHHHH
Q 018067          168 GITVYSPLRFY-GLDKPGMHVGVVGLGGLGHVAVKFAKAMG-VKVTVISTSPSKKSEAIERLGADSFLVSRDQ--DEMQA  243 (361)
Q Consensus       168 ~~ta~~~l~~~-~~~~~g~~vlV~Gag~vG~~a~~la~~~g-~~vi~~~~~~~~~~~~~~~~g~~~vv~~~~~--~~~~~  243 (361)
                      +.|||+++... ..+.++++|||+|+|.+|++++++|+.+| .+|+++++++++...+ +++|++++++++..  +.+.+
T Consensus       151 ~~ta~~~l~~~~~~~~~~~~vlI~g~~~vg~~~~~~a~~~g~~~v~~~~~~~~~~~~~-~~~g~~~~~~~~~~~~~~i~~  229 (340)
T cd05284         151 GLTAYHAVKKALPYLDPGSTVVVIGVGGLGHIAVQILRALTPATVIAVDRSEEALKLA-ERLGADHVLNASDDVVEEVRE  229 (340)
T ss_pred             HHHHHHHHHHhcccCCCCCEEEEEcCcHHHHHHHHHHHHhCCCcEEEEeCCHHHHHHH-HHhCCcEEEcCCccHHHHHHH
Confidence            99999999876 45788999999999889999999999999 7999998888776655 88999998887764  23334


Q ss_pred             hcC--CccEEEEcCCCcccHHHHHhccccCCEEEEecCCCCCcccChHHHHhCCcEEEecccCCHHHHHHHHHHHHcCCC
Q 018067          244 AMG--TMDGIIDTVSAVHPLMPLIGLLKSQGKLVLVGAPEKPLELPAFSLLMGRKIVGGSMIGGMKETQEMIDFAAKHNI  321 (361)
Q Consensus       244 ~~~--g~d~vid~~g~~~~~~~~~~~l~~~G~~v~~g~~~~~~~~~~~~~~~~~~~i~g~~~~~~~~~~~~~~ll~~~~~  321 (361)
                      +..  ++|+++|++|+...+..++++++++|+++.+|..+. ..++....+.+++++.++.....+++++++++++++.+
T Consensus       230 ~~~~~~~dvvld~~g~~~~~~~~~~~l~~~g~~i~~g~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~g~l  308 (340)
T cd05284         230 LTGGRGADAVIDFVGSDETLALAAKLLAKGGRYVIVGYGGH-GRLPTSDLVPTEISVIGSLWGTRAELVEVVALAESGKV  308 (340)
T ss_pred             HhCCCCCCEEEEcCCCHHHHHHHHHHhhcCCEEEEEcCCCC-CccCHHHhhhcceEEEEEecccHHHHHHHHHHHHhCCC
Confidence            433  699999999975558899999999999999987653 34444444578999999877677889999999999999


Q ss_pred             ceeEEEEecccHHHHHHHHHcCCCceEEEEEe
Q 018067          322 RADIEVIPADYVNTALERLAKADVRYRFVIDV  353 (361)
Q Consensus       322 ~~~~~~~~l~~~~~a~~~~~~~~~~gkvvi~~  353 (361)
                      ++.++.|+++++++|++.+++++..||+++.+
T Consensus       309 ~~~~~~~~~~~~~~a~~~~~~~~~~gkvv~~~  340 (340)
T cd05284         309 KVEITKFPLEDANEALDRLREGRVTGRAVLVP  340 (340)
T ss_pred             CcceEEEeHHHHHHHHHHHHcCCccceEEecC
Confidence            87678999999999999999998889999764

This group contains arabinose dehydrogenase (AraDH) and related alcohol dehydrogenases. AraDH is a member of the medium chain dehydrogenase/reductase family and catalyzes the NAD(P)-dependent oxidation of D-arabinose and other pentoses, the initial step in the metabolism of d-arabinose into 2-oxoglutarate. Like the alcohol dehydrogenases, AraDH binds a zinc in the catalytic cleft as well as a distal structural zinc. AraDH forms homotetramers as a dimer of dimers. AraDH replaces a conserved catalytic His with replace with Arg, compared to the canonical ADH site. NAD(P)(H)-dependent oxidoreductases are the major enzymes in the interconversion of alcohols and aldehydes, or ketones. Alcohol dehydrogenase in the liver converts ethanol and NAD+ to acetaldehyde and NADH, while in yeast and some other microorganisms ADH catalyzes the conversion acetaldehyde to ethanol in alcoholic fermentation. ADH is a member of the medium chain alcohol d

>cd08246 crotonyl_coA_red crotonyl-CoA reductase

Probab=100.00  E-value=1.1e-42  Score=330.34  Aligned_cols=337  Identities=20%  Similarity=0.236  Sum_probs=277.6

Q ss_pred             CCcccceeeeee--cCCCC-CccceeeccCCCCCCeEEEEEeeeccCcchHHhHhcCCC----------CCCCCCccccc
Q 018067            7 QEHPKNAFGWAA--KDTSG-VLSPFHFSRRATGEKDVTFKVTHCGICHSDLHMIKNEWG----------NTIYPIVPGHE   73 (361)
Q Consensus         7 ~~~~~~~~~~~~--~~~~~-~l~~~~~~~p~~~~~evlV~v~~~~i~~~D~~~~~g~~~----------~~~~p~~lG~e   73 (361)
                      .|.+|+++.+..  +++|. .+++++++.|.++++||+|++.+++||++|++...+...          ....+.++|||
T Consensus         9 ~~~~~~a~~~~~~~~g~~~~~~~~~~~~~p~l~~~evlI~v~~~gi~~~d~~~~~g~~~~~~~~~~~~~~~~~~~~~G~e   88 (393)
T cd08246           9 VPEKMYAFAIRPERYGDPAQAIQLEDVPVPELGPGEVLVAVMAAGVNYNNVWAALGEPVSTFAARQRRGRDEPYHIGGSD   88 (393)
T ss_pred             CchhhhheeeecccCCCcccceEEeecCCCCCCCCEEEEEEEEEeeccchhhhhcCCCccccccccccCCCCCccccccc
Confidence            345677777642  33443 478889999999999999999999999999988766411          11223589999


Q ss_pred             ccEEEEEeCCCCCCCCCCCEEEeccccCCCCCCcccccCCCCCCcchhcccccccCCCCcCCCcceeEEeecCCceEECC
Q 018067           74 IVGVVTEVGSKVSKFKVGDKVGVGCMVGSCRSCDSCAIDLENYCPKVIMTYANKYHDGTITYGGYSDIMVADEHFVVRIP  153 (361)
Q Consensus        74 ~~G~Vv~vG~~v~~~~~GdrV~~~~~~~~c~~c~~c~~~~~~~c~~~~~~~~~~~~~~~~~~g~~a~~v~v~~~~~~~ip  153 (361)
                      ++|+|+++|++++.|++||+|++.+.. .|+.|..|.++..++|....+.  +.    ....|+|++|+.++...++++|
T Consensus        89 ~~G~V~~vG~~v~~~~~Gd~V~~~~~~-~~~~~~~c~~~~~~~~~~~~~~--g~----~~~~g~~a~y~~v~~~~l~~iP  161 (393)
T cd08246          89 ASGIVWAVGEGVKNWKVGDEVVVHCSV-WDGNDPERAGGDPMFDPSQRIW--GY----ETNYGSFAQFALVQATQLMPKP  161 (393)
T ss_pred             eEEEEEEeCCCCCcCCCCCEEEEeccc-cccCcccccccccccccccccc--cc----cCCCCcceeEEEechHHeEECC
Confidence            999999999999999999999876654 7999999999999999864322  11    1346999999999999999999


Q ss_pred             CCCCcccccccchhhhhhhhHhhhc--CCCCCCCEEEEEcC-ChHHHHHHHHHHHcCCeEEEEeCCchhHHHHHHHcCCC
Q 018067          154 EGTPLDATAPLLCAGITVYSPLRFY--GLDKPGMHVGVVGL-GGLGHVAVKFAKAMGVKVTVISTSPSKKSEAIERLGAD  230 (361)
Q Consensus       154 ~~~~~~~aa~l~~~~~ta~~~l~~~--~~~~~g~~vlV~Ga-g~vG~~a~~la~~~g~~vi~~~~~~~~~~~~~~~~g~~  230 (361)
                      +++++++++.+++.+.|||+++...  +.+++|++|+|+|+ |.+|++++++|+.+|+++++++++++++..+ +++|++
T Consensus       162 ~~l~~~~aa~l~~~~~tA~~al~~~~~~~~~~g~~vlV~ga~g~iG~a~~~lak~~G~~vv~~~~s~~~~~~~-~~~G~~  240 (393)
T cd08246         162 KHLSWEEAAAYMLVGATAYRMLFGWNPNTVKPGDNVLIWGASGGLGSMAIQLARAAGANPVAVVSSEEKAEYC-RALGAE  240 (393)
T ss_pred             CCCCHHHHhhhcccHHHHHHHHhhcccccCCCCCEEEEECCCcHHHHHHHHHHHHcCCeEEEEeCCHHHHHHH-HHcCCC
Confidence            9999999999999999999998765  56889999999997 9999999999999999999888877776555 789999


Q ss_pred             EEecCCCH-------------------------HHHHHhcC---CccEEEEcCCCcccHHHHHhccccCCEEEEecCCCC
Q 018067          231 SFLVSRDQ-------------------------DEMQAAMG---TMDGIIDTVSAVHPLMPLIGLLKSQGKLVLVGAPEK  282 (361)
Q Consensus       231 ~vv~~~~~-------------------------~~~~~~~~---g~d~vid~~g~~~~~~~~~~~l~~~G~~v~~g~~~~  282 (361)
                      .++++++.                         +.+.++++   ++|++||++|+.. +..++++++++|+++.+|....
T Consensus       241 ~~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~l~~~~~g~d~vid~~g~~~-~~~~~~~l~~~G~~v~~g~~~~  319 (393)
T cd08246         241 GVINRRDFDHWGVLPDVNSEAYTAWTKEARRFGKAIWDILGGREDPDIVFEHPGRAT-FPTSVFVCDRGGMVVICAGTTG  319 (393)
T ss_pred             EEEcccccccccccccccchhhhhhhhccchHHHHHHHHhCCCCCCeEEEECCchHh-HHHHHHHhccCCEEEEEcccCC
Confidence            88876432                         12333333   6999999999855 8999999999999999987543


Q ss_pred             -CcccChHHHHhCCcEEEecccCCHHHHHHHHHHHHcCCCceeE-EEEecccHHHHHHHHHcC-CCceEEEEE
Q 018067          283 -PLELPAFSLLMGRKIVGGSMIGGMKETQEMIDFAAKHNIRADI-EVIPADYVNTALERLAKA-DVRYRFVID  352 (361)
Q Consensus       283 -~~~~~~~~~~~~~~~i~g~~~~~~~~~~~~~~ll~~~~~~~~~-~~~~l~~~~~a~~~~~~~-~~~gkvvi~  352 (361)
                       ...++...++.++.++.+++....+++.+++++++++++.+.+ ++|+++++++|++.+.++ +..||+++-
T Consensus       320 ~~~~~~~~~l~~~~~~i~g~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~l~~~~~a~~~~~~~~~~~gkvvv~  392 (393)
T cd08246         320 YNHTYDNRYLWMRQKRIQGSHFANDREAAEANRLVMKGRIDPCLSKVFSLDETPDAHQLMHRNQHHVGNMAVL  392 (393)
T ss_pred             CCCCCcHHHHhhheeEEEecccCcHHHHHHHHHHHHcCCceeeeeEEEeHHHHHHHHHHHHhCccccceEEEe
Confidence             2445566677889999999888888999999999999998655 899999999999999988 677998864

Crotonyl-CoA reductase, a member of the medium chain dehydrogenase/reductase family, catalyzes the NADPH-dependent conversion of crotonyl-CoA to butyryl-CoA, a step in (2S)-methylmalonyl-CoA production for straight-chain fatty acid biosynthesis. Like enoyl reductase, another enzyme in fatty acid synthesis, crotonyl-CoA reductase is a member of the zinc-dependent alcohol dehydrogenase-like medium chain dehydrogenase/reductase family. The medium chain dehydrogenases/reductase (MDR)/zinc-dependent alcohol dehydrogenase-like family, which contains the zinc-dependent alcohol dehydrogenase (ADH-Zn) and related proteins, is a diverse group of proteins related to the first identified member, class I mammalian ADH. MDRs display a broad range of activities and are distinguished from the smaller short chain dehydrogenases (~ 250 amino acids vs. the ~ 350 amino acids of the MDR). The MDR proteins have 2 domains: a C-terminal NAD(P) binding-Rossma

>TIGR01751 crot-CoA-red crotonyl-CoA reductase

Probab=100.00  E-value=1.6e-42  Score=329.61  Aligned_cols=343  Identities=19%  Similarity=0.243  Sum_probs=285.4

Q ss_pred             CCcccceeeeee--cCCC-CCccceeeccCCCCCCeEEEEEeeeccCcchHHhHhcCCC----------CCCCC-Ccccc
Q 018067            7 QEHPKNAFGWAA--KDTS-GVLSPFHFSRRATGEKDVTFKVTHCGICHSDLHMIKNEWG----------NTIYP-IVPGH   72 (361)
Q Consensus         7 ~~~~~~~~~~~~--~~~~-~~l~~~~~~~p~~~~~evlV~v~~~~i~~~D~~~~~g~~~----------~~~~p-~~lG~   72 (361)
                      ++.+|+++.+..  +++| +.+++.+++.|.++++|++||++++++|++|++...+...          ....| .++||
T Consensus         4 ~~~~~~a~~~~~~~~~~~~~~~~~~~~~~p~l~~~evlV~v~~~gi~~~d~~~~~~~~~~~~~~~~~~~~~~~~~~v~G~   83 (398)
T TIGR01751         4 VPETMYAFAIREERDGDPRQAIQLEVVPVPELGPGEVLVAVMAAGVNYNNVWAALGEPVSTFAFLRKYGRDDLPFHIIGS   83 (398)
T ss_pred             cchhhhheEEecccCCCcccceEEeecCCCCCCCCeEEEEEEEEecCchhhhhhcCCccchhhhhcccCCCCCCceeccc
Confidence            456799999965  5555 6688999999999999999999999999999887655321          01223 27999


Q ss_pred             cccEEEEEeCCCCCCCCCCCEEEeccccCCCCCCcccccCCCCCCcchhcccccccCCCCcCCCcceeEEeecCCceEEC
Q 018067           73 EIVGVVTEVGSKVSKFKVGDKVGVGCMVGSCRSCDSCAIDLENYCPKVIMTYANKYHDGTITYGGYSDIMVADEHFVVRI  152 (361)
Q Consensus        73 e~~G~Vv~vG~~v~~~~~GdrV~~~~~~~~c~~c~~c~~~~~~~c~~~~~~~~~~~~~~~~~~g~~a~~v~v~~~~~~~i  152 (361)
                      |++|+|+++|++++.|++||+|++.+.. .|++|.+|..+.++.|......  +    .....|+|++|+.++.+.++++
T Consensus        84 e~~G~V~~vG~~v~~~~~Gd~V~~~~~~-~~~~~~~~~~~~~~~~~~~~~~--g----~~~~~g~~ae~~~v~~~~~~~v  156 (398)
T TIGR01751        84 DASGVVWRVGPGVTRWKVGDEVVASCLQ-VDLTAPDGRVGDPMLSSEQRIW--G----YETNFGSFAEFALVKDYQLMPK  156 (398)
T ss_pred             ceEEEEEEeCCCCCCCCCCCEEEEcccc-ccCCchhhccCccccccccccc--c----ccCCCccceEEEEechHHeEEC
Confidence            9999999999999999999999876554 8999999999999999764311  1    0124789999999999999999


Q ss_pred             CCCCCcccccccchhhhhhhhHhhh--cCCCCCCCEEEEEcC-ChHHHHHHHHHHHcCCeEEEEeCCchhHHHHHHHcCC
Q 018067          153 PEGTPLDATAPLLCAGITVYSPLRF--YGLDKPGMHVGVVGL-GGLGHVAVKFAKAMGVKVTVISTSPSKKSEAIERLGA  229 (361)
Q Consensus       153 p~~~~~~~aa~l~~~~~ta~~~l~~--~~~~~~g~~vlV~Ga-g~vG~~a~~la~~~g~~vi~~~~~~~~~~~~~~~~g~  229 (361)
                      |+++++++++.+.+.+.+||+++..  ...+.+|++|+|+|+ |.+|++++++|+++|+++++++++++++..+ +++|+
T Consensus       157 P~~l~~~~aa~~~~~~~ta~~al~~~~~~~~~~g~~vlV~Ga~g~vG~~ai~~ak~~G~~vi~~~~~~~~~~~~-~~~g~  235 (398)
T TIGR01751       157 PKHLTWEEAACPGLTGATAYRQLVGWNPATVKPGDNVLIWGAAGGLGSYATQLARAGGGNPVAVVSSPEKAEYC-RELGA  235 (398)
T ss_pred             CCCCCHHHHhhccchHHHHHHHHhhhhccCCCCCCEEEEEcCCcHHHHHHHHHHHHcCCeEEEEcCCHHHHHHH-HHcCC
Confidence            9999999999999999999999865  466789999999998 9999999999999999998888777766555 67999


Q ss_pred             CEEecCCCHH-------------------------HHHHhc--CCccEEEEcCCCcccHHHHHhccccCCEEEEecCCCC
Q 018067          230 DSFLVSRDQD-------------------------EMQAAM--GTMDGIIDTVSAVHPLMPLIGLLKSQGKLVLVGAPEK  282 (361)
Q Consensus       230 ~~vv~~~~~~-------------------------~~~~~~--~g~d~vid~~g~~~~~~~~~~~l~~~G~~v~~g~~~~  282 (361)
                      +.++++++.+                         .+.+++  .++|++|||+|... +..++++++++|+++.+|....
T Consensus       236 ~~~v~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~d~vld~~g~~~-~~~~~~~l~~~G~~v~~g~~~~  314 (398)
T TIGR01751       236 EAVIDRNDFGHWGRLPDLNTQAPKEWTKSFKRFGKRIRELTGGEDPDIVFEHPGRAT-FPTSVFVCRRGGMVVICGGTTG  314 (398)
T ss_pred             CEEecCCCcchhhccccccccccchhhhcchhHHHHHHHHcCCCCceEEEECCcHHH-HHHHHHhhccCCEEEEEccccC
Confidence            9888865421                         122233  36999999999765 8899999999999999997654


Q ss_pred             C-cccChHHHHhCCcEEEecccCCHHHHHHHHHHHHcCCCceeE-EEEecccHHHHHHHHHcCCCceEEEEEeCCccc
Q 018067          283 P-LELPAFSLLMGRKIVGGSMIGGMKETQEMIDFAAKHNIRADI-EVIPADYVNTALERLAKADVRYRFVIDVANTMK  358 (361)
Q Consensus       283 ~-~~~~~~~~~~~~~~i~g~~~~~~~~~~~~~~ll~~~~~~~~~-~~~~l~~~~~a~~~~~~~~~~gkvvi~~~~~~~  358 (361)
                      . ..++...++.++.++.++.....+++++++++++++++.+.+ +++++++++++|+.+.+++..||++++++.+.+
T Consensus       315 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~l~~~~~~~~~l~~~~~a~~~~~~~~~~gkvvv~~~~~~~  392 (398)
T TIGR01751       315 YNHDYDNRYLWMRQKRIQGSHFANLREAWEANRLVAKGRIDPTLSKVYPLEEIGQAHQDVHRNHHQGNVAVLVLAPRP  392 (398)
T ss_pred             CCCCcCHHHHhhcccEEEccccCcHHHHHHHHHHHHCCCcccceeeEEcHHHHHHHHHHHHcCCCCceEEEEeCCCCC
Confidence            3 455666667788899998888888899999999999998666 899999999999999999988999999998765

The enzyme modelled by this alignment is responsible for the conversion of crotonyl-CoA reductase to butyryl-CoA. In serine cycle methylotrophic bacteria this enzyme is involved in the process of acetyl-CoA to glyoxylate. In other bacteria the enzyme is used to produce butyrate for incorporation into polyketides such as tylosin from Streptomyces fradiae and coronatine from Pseudomonas syringae.

>cd08283 FDH_like_1 Glutathione-dependent formaldehyde dehydrogenase related proteins, child 1

Probab=100.00  E-value=2.1e-42  Score=327.40  Aligned_cols=337  Identities=22%  Similarity=0.259  Sum_probs=274.9

Q ss_pred             cceeeeeecCCCCCccceeeccCCCC-CCeEEEEEeeeccCcchHHhHhcCCCCCCCCCcccccccEEEEEeCCCCCCCC
Q 018067           11 KNAFGWAAKDTSGVLSPFHFSRRATG-EKDVTFKVTHCGICHSDLHMIKNEWGNTIYPIVPGHEIVGVVTEVGSKVSKFK   89 (361)
Q Consensus        11 ~~~~~~~~~~~~~~l~~~~~~~p~~~-~~evlV~v~~~~i~~~D~~~~~g~~~~~~~p~~lG~e~~G~Vv~vG~~v~~~~   89 (361)
                      |+++.+.   +++.+++.+++.|.+. +++|+||+.++++|++|++.+.|.++...+|.++|||++|+|+++|+++++|+
T Consensus         1 m~a~~~~---~~~~~~~~~~~~p~~~~~~~v~i~v~~~~i~~~d~~~~~g~~~~~~~p~~~G~e~~G~V~~vG~~v~~~~   77 (386)
T cd08283           1 MKALVWH---GKGDVRVEEVPDPKIEDPTDAIVRVTATAICGSDLHLYHGYIPGMKKGDILGHEFMGVVEEVGPEVRNLK   77 (386)
T ss_pred             CeeEEEe---cCCCceEEeCCCCCCCCCCeEEEEEEEEecchhhhhhhcCCCCCCCCCccccccceEEEEEeCCCCCCCC
Confidence            5666653   5678999999999984 99999999999999999999988776556788999999999999999999999


Q ss_pred             CCCEEEeccccCCCCCCcccccCCCCCCcchhccc----------ccccC---CCCcCCCcceeEEeecCC--ceEECCC
Q 018067           90 VGDKVGVGCMVGSCRSCDSCAIDLENYCPKVIMTY----------ANKYH---DGTITYGGYSDIMVADEH--FVVRIPE  154 (361)
Q Consensus        90 ~GdrV~~~~~~~~c~~c~~c~~~~~~~c~~~~~~~----------~~~~~---~~~~~~g~~a~~v~v~~~--~~~~ip~  154 (361)
                      +||+|+..+.. .||+|.+|..++++.|+++....          .+...   ......|+|++|+.++.+  .++++|+
T Consensus        78 ~Gd~V~~~~~~-~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~v~~~~~~~~~lp~  156 (386)
T cd08283          78 VGDRVVVPFTI-ACGECFYCKRGLYSQCDNTNPSAEMAKLYGHAGAGIFGYSHLTGGYAGGQAEYVRVPFADVGPFKIPD  156 (386)
T ss_pred             CCCEEEEcCcC-CCCCChhhcCCCcccCCCcccccccccccccccccccccccccCCCCCeeEEEEEcccccCeEEECCC
Confidence            99999876655 79999999999999999864321          00000   011246999999999987  8999999


Q ss_pred             CCCcccccccchhhhhhhhHhhhcCCCCCCCEEEEEcCChHHHHHHHHHHHcCC-eEEEEeCCchhHHHHHHHcCCCEEe
Q 018067          155 GTPLDATAPLLCAGITVYSPLRFYGLDKPGMHVGVVGLGGLGHVAVKFAKAMGV-KVTVISTSPSKKSEAIERLGADSFL  233 (361)
Q Consensus       155 ~~~~~~aa~l~~~~~ta~~~l~~~~~~~~g~~vlV~Gag~vG~~a~~la~~~g~-~vi~~~~~~~~~~~~~~~~g~~~vv  233 (361)
                      ++++++|+.+++.+.+||+++ ....+++|++|||+|+|.+|++++++|+.+|+ +++++++++++.+.+ ++++...++
T Consensus       157 ~~~~~~aa~l~~~~~ta~~~l-~~~~~~~g~~VlV~g~G~vG~~~~~la~~~g~~~vi~~~~~~~~~~~~-~~~~~~~vi  234 (386)
T cd08283         157 DLSDEKALFLSDILPTGYHAA-ELAEVKPGDTVAVWGCGPVGLFAARSAKLLGAERVIAIDRVPERLEMA-RSHLGAETI  234 (386)
T ss_pred             CCCHHHHhhhccchhhhHHHH-hhccCCCCCEEEEECCCHHHHHHHHHHHHcCCCEEEEEcCCHHHHHHH-HHcCCcEEE
Confidence            999999999999999999999 56778999999999989999999999999998 588888887776555 667433567


Q ss_pred             cCCCHH-H---HHHhcC--CccEEEEcCCCc---------------------ccHHHHHhccccCCEEEEecCCCC-Ccc
Q 018067          234 VSRDQD-E---MQAAMG--TMDGIIDTVSAV---------------------HPLMPLIGLLKSQGKLVLVGAPEK-PLE  285 (361)
Q Consensus       234 ~~~~~~-~---~~~~~~--g~d~vid~~g~~---------------------~~~~~~~~~l~~~G~~v~~g~~~~-~~~  285 (361)
                      ++.+.+ .   +..+..  ++|++||++|+.                     ..+..++++++++|+++.+|..+. ...
T Consensus       235 ~~~~~~~~~~~l~~~~~~~~~D~vld~vg~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~G~iv~~g~~~~~~~~  314 (386)
T cd08283         235 NFEEVDDVVEALRELTGGRGPDVCIDAVGMEAHGSPLHKAEQALLKLETDRPDALREAIQAVRKGGTVSIIGVYGGTVNK  314 (386)
T ss_pred             cCCcchHHHHHHHHHcCCCCCCEEEECCCCcccccccccccccccccccCchHHHHHHHHHhccCCEEEEEcCCCCCcCc
Confidence            766542 3   333333  699999999853                     247889999999999999997654 234


Q ss_pred             cChHHHHhCCcEEEecccCCHHHHHHHHHHHHcCCCcee--E-EEEecccHHHHHHHHHcCCC-ceEEEEEe
Q 018067          286 LPAFSLLMGRKIVGGSMIGGMKETQEMIDFAAKHNIRAD--I-EVIPADYVNTALERLAKADV-RYRFVIDV  353 (361)
Q Consensus       286 ~~~~~~~~~~~~i~g~~~~~~~~~~~~~~ll~~~~~~~~--~-~~~~l~~~~~a~~~~~~~~~-~gkvvi~~  353 (361)
                      ++....+.+++++.++.....+.++++++++.++++.+.  + +.|+++++++||+.+.+++. .+|++|++
T Consensus       315 ~~~~~~~~~~~~i~~~~~~~~~~~~~~~~~l~~g~l~~~~~~~~~~~l~~~~~a~~~~~~~~~~~~k~~~~~  386 (386)
T cd08283         315 FPIGAAMNKGLTLRMGQTHVQRYLPRLLELIESGELDPSFIITHRLPLEDAPEAYKIFDKKEDGCIKVVLKP  386 (386)
T ss_pred             cCHHHHHhCCcEEEeccCCchHHHHHHHHHHHcCCCChhHceEEEecHHHHHHHHHHHHhCCCCeEEEEecC
Confidence            555556789999999877677889999999999998863  3 78999999999999988874 58999863

Members identified as glutathione-dependent formaldehyde dehydrogenase(FDH), a member of the zinc-dependent/medium chain alcohol dehydrogenase family. FDH converts formaldehyde and NAD(P) to formate and NAD(P)H. The initial step in this process the spontaneous formation of a S-(hydroxymethyl)glutathione adduct from formaldehyde and glutathione, followed by FDH-mediated oxidation (and detoxification) of the adduct to S-formylglutathione. MDH family uses NAD(H) as a cofactor in the interconversion of alcohols and aldehydes, or ketones. Like many zinc-dependent alcohol dehydrogenases (ADH) of the medium chain alcohol dehydrogenase/reductase family (MDR), these FDHs form dimers, with 4 zinc ions per dimer. The medium chain alcohol dehydrogenase family (MDR) has a NAD(P)(H)-binding domain in a Rossmann fold of a beta-alpha form. The N-terminal region typically has an all-beta catalytic domain. T

>PRK13771 putative alcohol dehydrogenase; Provisional

Probab=100.00  E-value=2.2e-42  Score=321.46  Aligned_cols=328  Identities=25%  Similarity=0.372  Sum_probs=276.2

Q ss_pred             cceeeeeecCCCCCccceeeccCCCCCCeEEEEEeeeccCcchHHhHhcCCCCCCCCCcccccccEEEEEeCCCCCCCCC
Q 018067           11 KNAFGWAAKDTSGVLSPFHFSRRATGEKDVTFKVTHCGICHSDLHMIKNEWGNTIYPIVPGHEIVGVVTEVGSKVSKFKV   90 (361)
Q Consensus        11 ~~~~~~~~~~~~~~l~~~~~~~p~~~~~evlV~v~~~~i~~~D~~~~~g~~~~~~~p~~lG~e~~G~Vv~vG~~v~~~~~   90 (361)
                      |+++++..++  ..++++++|.|.+.++|++|+++++++|++|++...|..+...+|.++|||++|+|+++|+++..+++
T Consensus         1 m~a~~~~~~~--~~~~~~~~~~~~~~~~~v~V~v~~~~i~~~d~~~~~g~~~~~~~~~~~g~e~~G~v~~~g~~~~~~~~   78 (334)
T PRK13771          1 MKAVILPGFK--QGYRIEEVPDPKPGKDEVVIKVNYAGLCYRDLLQLQGFYPRMKYPVILGHEVVGTVEEVGENVKGFKP   78 (334)
T ss_pred             CeeEEEcCCC--CCcEEEeCCCCCCCCCeEEEEEEEEeechhhHHHhcCCCCCCCCCeeccccceEEEEEeCCCCccCCC
Confidence            5566654322  34889999999999999999999999999999988887655566789999999999999999988999


Q ss_pred             CCEEEeccccCCCCCCcccccCCCCCCcchhcccccccCCCCcCCCcceeEEeecCCceEECCCCCCcccccccchhhhh
Q 018067           91 GDKVGVGCMVGSCRSCDSCAIDLENYCPKVIMTYANKYHDGTITYGGYSDIMVADEHFVVRIPEGTPLDATAPLLCAGIT  170 (361)
Q Consensus        91 GdrV~~~~~~~~c~~c~~c~~~~~~~c~~~~~~~~~~~~~~~~~~g~~a~~v~v~~~~~~~ip~~~~~~~aa~l~~~~~t  170 (361)
                      ||+|++.++. +|+.|.+|..+.+++|+...+.       +....|+|++|+.++.+.++++|+++++.+++.+++.+.+
T Consensus        79 G~~V~~~~~~-~~~~~~~~~~~~~~~~~~~~~~-------~~~~~g~~~~~~~~~~~~~~~lp~~~~~~~~a~l~~~~~~  150 (334)
T PRK13771         79 GDRVASLLYA-PDGTCEYCRSGEEAYCKNRLGY-------GEELDGFFAEYAKVKVTSLVKVPPNVSDEGAVIVPCVTGM  150 (334)
T ss_pred             CCEEEECCCC-CCcCChhhcCCCcccCcccccc-------ccccCceeeeeeecchhceEECCCCCCHHHhhcccchHHH
Confidence            9999887665 9999999999999999885321       3345799999999999999999999999999999999999


Q ss_pred             hhhHhhhcCCCCCCCEEEEEcC-ChHHHHHHHHHHHcCCeEEEEeCCchhHHHHHHHcCCCEEecCCC-HHHHHHhcCCc
Q 018067          171 VYSPLRFYGLDKPGMHVGVVGL-GGLGHVAVKFAKAMGVKVTVISTSPSKKSEAIERLGADSFLVSRD-QDEMQAAMGTM  248 (361)
Q Consensus       171 a~~~l~~~~~~~~g~~vlV~Ga-g~vG~~a~~la~~~g~~vi~~~~~~~~~~~~~~~~g~~~vv~~~~-~~~~~~~~~g~  248 (361)
                      ||+++... .++++++|+|+|+ |.+|++++++|+.+|+++++++++++++..+ +++ ++.+++.+. .+.+... +++
T Consensus       151 a~~~~~~~-~~~~~~~vlI~g~~g~~g~~~~~la~~~g~~vi~~~~~~~~~~~~-~~~-~~~~~~~~~~~~~v~~~-~~~  226 (334)
T PRK13771        151 VYRGLRRA-GVKKGETVLVTGAGGGVGIHAIQVAKALGAKVIAVTSSESKAKIV-SKY-ADYVIVGSKFSEEVKKI-GGA  226 (334)
T ss_pred             HHHHHHhc-CCCCCCEEEEECCCccHHHHHHHHHHHcCCEEEEEeCCHHHHHHH-HHH-HHHhcCchhHHHHHHhc-CCC
Confidence            99999877 7899999999998 9999999999999999999999988877666 667 766666542 1223333 479


Q ss_pred             cEEEEcCCCcccHHHHHhccccCCEEEEecCCCCCc--ccChHHHHhCCcEEEecccCCHHHHHHHHHHHHcCCCceeE-
Q 018067          249 DGIIDTVSAVHPLMPLIGLLKSQGKLVLVGAPEKPL--ELPAFSLLMGRKIVGGSMIGGMKETQEMIDFAAKHNIRADI-  325 (361)
Q Consensus       249 d~vid~~g~~~~~~~~~~~l~~~G~~v~~g~~~~~~--~~~~~~~~~~~~~i~g~~~~~~~~~~~~~~ll~~~~~~~~~-  325 (361)
                      |++||++|+.. +..+++.++++|+++.+|......  .......+.+++++.+......++++++++++.++.+++.+ 
T Consensus       227 d~~ld~~g~~~-~~~~~~~l~~~G~~v~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~  305 (334)
T PRK13771        227 DIVIETVGTPT-LEESLRSLNMGGKIIQIGNVDPSPTYSLRLGYIILKDIEIIGHISATKRDVEEALKLVAEGKIKPVIG  305 (334)
T ss_pred             cEEEEcCChHH-HHHHHHHHhcCCEEEEEeccCCCCCcccCHHHHHhcccEEEEecCCCHHHHHHHHHHHHcCCCcceEe
Confidence            99999999876 889999999999999999754322  23344445688899987767788999999999999998655 


Q ss_pred             EEEecccHHHHHHHHHcCCCceEEEEEe
Q 018067          326 EVIPADYVNTALERLAKADVRYRFVIDV  353 (361)
Q Consensus       326 ~~~~l~~~~~a~~~~~~~~~~gkvvi~~  353 (361)
                      +.++++++++||+.+++++..||+++.+
T Consensus       306 ~~~~~~~~~~a~~~~~~~~~~~kvv~~~  333 (334)
T PRK13771        306 AEVSLSEIDKALEELKDKSRIGKILVKP  333 (334)
T ss_pred             eeEcHHHHHHHHHHHHcCCCcceEEEec
Confidence            8999999999999999888789999865

>cd08278 benzyl_alcohol_DH Benzyl alcohol dehydrogenase

Probab=100.00  E-value=4e-42  Score=323.36  Aligned_cols=335  Identities=25%  Similarity=0.387  Sum_probs=271.2

Q ss_pred             cceeeeeecCCCCCccceeeccCCCCCCeEEEEEeeeccCcchHHhHhcCCCCCCCCCcccccccEEEEEeCCCCCCCCC
Q 018067           11 KNAFGWAAKDTSGVLSPFHFSRRATGEKDVTFKVTHCGICHSDLHMIKNEWGNTIYPIVPGHEIVGVVTEVGSKVSKFKV   90 (361)
Q Consensus        11 ~~~~~~~~~~~~~~l~~~~~~~p~~~~~evlV~v~~~~i~~~D~~~~~g~~~~~~~p~~lG~e~~G~Vv~vG~~v~~~~~   90 (361)
                      |+++.+..  .++.+++++++.|.+.++||+|||.++++|++|++...|.++ ..+|.++|||++|+|+++|+++..|++
T Consensus         3 ~~a~~~~~--~~~~~~~~~~~~p~~~~~~v~Vkv~a~gi~~~d~~~~~g~~~-~~~p~v~G~e~~G~V~~vG~~v~~~~~   79 (365)
T cd08278           3 TTAAVVRE--PGGPFVLEDVELDDPRPDEVLVRIVATGICHTDLVVRDGGLP-TPLPAVLGHEGAGVVEAVGSAVTGLKP   79 (365)
T ss_pred             cEEeeecc--CCCcceEEEeecCCCCCCeEEEEEEEeecCcccHHHhcCCCC-CCCCcccccceeEEEEEeCCCcccCCC
Confidence            55555543  234578889999999999999999999999999999888665 356889999999999999999999999


Q ss_pred             CCEEEeccccCCCCCCcccccCCCCCCcchhcc-cccccCC---------------CCcCCCcceeEEeecCCceEECCC
Q 018067           91 GDKVGVGCMVGSCRSCDSCAIDLENYCPKVIMT-YANKYHD---------------GTITYGGYSDIMVADEHFVVRIPE  154 (361)
Q Consensus        91 GdrV~~~~~~~~c~~c~~c~~~~~~~c~~~~~~-~~~~~~~---------------~~~~~g~~a~~v~v~~~~~~~ip~  154 (361)
                      ||||++.+ . .|+.|.+|+.+..++|.+.... +.+....               +....|+|++|+.++.++++++|+
T Consensus        80 Gd~V~~~~-~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~y~~v~~~~~~~iP~  157 (365)
T cd08278          80 GDHVVLSF-A-SCGECANCLSGHPAYCENFFPLNFSGRRPDGSTPLSLDDGTPVHGHFFGQSSFATYAVVHERNVVKVDK  157 (365)
T ss_pred             CCEEEEcc-c-CCCCChHHhCCCcccccCcccccccccccCCcccccccCCcccccccccccceeeEEEecchhEEECCC
Confidence            99998754 3 7999999999999999865311 0000000               012368999999999999999999


Q ss_pred             CCCcccccccchhhhhhhhHhhhcCCCCCCCEEEEEcCChHHHHHHHHHHHcCCe-EEEEeCCchhHHHHHHHcCCCEEe
Q 018067          155 GTPLDATAPLLCAGITVYSPLRFYGLDKPGMHVGVVGLGGLGHVAVKFAKAMGVK-VTVISTSPSKKSEAIERLGADSFL  233 (361)
Q Consensus       155 ~~~~~~aa~l~~~~~ta~~~l~~~~~~~~g~~vlV~Gag~vG~~a~~la~~~g~~-vi~~~~~~~~~~~~~~~~g~~~vv  233 (361)
                      ++++++++.+++++.+||.++.....+++|++|+|+|+|.+|++++++|++.|++ ++++++++++. ++++++|++.++
T Consensus       158 ~~s~~~a~~l~~~~~ta~~~~~~~~~~~~g~~vlI~g~g~vG~~~~~la~~~G~~~v~~~~~~~~k~-~~~~~~g~~~~i  236 (365)
T cd08278         158 DVPLELLAPLGCGIQTGAGAVLNVLKPRPGSSIAVFGAGAVGLAAVMAAKIAGCTTIIAVDIVDSRL-ELAKELGATHVI  236 (365)
T ss_pred             CCCHHHhhhhcchhhhhhHHHhhhcCCCCCCEEEEECCCHHHHHHHHHHHHcCCCeEEEEeCCHHHH-HHHHHcCCcEEe
Confidence            9999999999999999999988777889999999998899999999999999995 66666666554 566889999888


Q ss_pred             cCCCHH---HHHHhc-CCccEEEEcCCCcccHHHHHhccccCCEEEEecCCC--CCcccChHHHHhCCcEEEecccC---
Q 018067          234 VSRDQD---EMQAAM-GTMDGIIDTVSAVHPLMPLIGLLKSQGKLVLVGAPE--KPLELPAFSLLMGRKIVGGSMIG---  304 (361)
Q Consensus       234 ~~~~~~---~~~~~~-~g~d~vid~~g~~~~~~~~~~~l~~~G~~v~~g~~~--~~~~~~~~~~~~~~~~i~g~~~~---  304 (361)
                      ++++.+   .+..+. .++|+++|++|+...+..++++++++|+++.+|...  ....++...++.+++++.++...   
T Consensus       237 ~~~~~~~~~~v~~~~~~~~d~vld~~g~~~~~~~~~~~l~~~G~~v~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  316 (365)
T cd08278         237 NPKEEDLVAAIREITGGGVDYALDTTGVPAVIEQAVDALAPRGTLALVGAPPPGAEVTLDVNDLLVSGKTIRGVIEGDSV  316 (365)
T ss_pred             cCCCcCHHHHHHHHhCCCCcEEEECCCCcHHHHHHHHHhccCCEEEEeCcCCCCCccccCHHHHhhcCceEEEeecCCcC
Confidence            877643   333333 479999999997666899999999999999999753  33456666666788998876543   


Q ss_pred             CHHHHHHHHHHHHcCCCce--eEEEEecccHHHHHHHHHcCCCceEEEEE
Q 018067          305 GMKETQEMIDFAAKHNIRA--DIEVIPADYVNTALERLAKADVRYRFVID  352 (361)
Q Consensus       305 ~~~~~~~~~~ll~~~~~~~--~~~~~~l~~~~~a~~~~~~~~~~gkvvi~  352 (361)
                      ..+.++++++++.++++.+  .+..|+++++++|++.+++++. -|++++
T Consensus       317 ~~~~~~~~~~~l~~g~l~~~~~~~~~~l~~~~~a~~~~~~~~~-~k~~~~  365 (365)
T cd08278         317 PQEFIPRLIELYRQGKFPFDKLVTFYPFEDINQAIADSESGKV-IKPVLR  365 (365)
T ss_pred             hHHHHHHHHHHHHcCCCChHHheEEecHHHHHHHHHHHHCCCc-eEEEEC
Confidence            2356788999999999864  2378999999999999998875 588774

Benzyl alcohol dehydrogenase is similar to liver alcohol dehydrogenase, but has some amino acid substitutions near the active site, which may determine the enzyme's specificity of oxidizing aromatic substrates. Also known as aryl-alcohol dehydrogenases, they catalyze the conversion of an aromatic alcohol + NAD+ to an aromatic aldehyde + NADH + H+. NAD(P)(H)-dependent oxidoreductases are the major enzymes in the interconversion of alcohols and aldehydes, or ketones. Alcohol dehydrogenase in the liver converts ethanol and NAD+ to acetaldehyde and NADH, while in yeast and some other microorganisms ADH catalyzes the conversion acetaldehyde to ethanol in alcoholic fermentation. ADH is a member of the medium chain alcohol dehydrogenase family (MDR), which has a NAD(P)(H)-binding domain in a Rossmann fold of a beta-alpha form. The NAD(H)-binding region is comprised of 2 structurally similar halves, each of which contacts a mononu

>cd08260 Zn_ADH6 Alcohol dehydrogenases of the MDR family

Probab=100.00  E-value=7.6e-42  Score=319.30  Aligned_cols=331  Identities=26%  Similarity=0.366  Sum_probs=281.3

Q ss_pred             cceeeeeecCCCCCccceeeccCCCCCCeEEEEEeeeccCcchHHhHhcCCCCCCCCCcccccccEEEEEeCCCCCCCCC
Q 018067           11 KNAFGWAAKDTSGVLSPFHFSRRATGEKDVTFKVTHCGICHSDLHMIKNEWGNTIYPIVPGHEIVGVVTEVGSKVSKFKV   90 (361)
Q Consensus        11 ~~~~~~~~~~~~~~l~~~~~~~p~~~~~evlV~v~~~~i~~~D~~~~~g~~~~~~~p~~lG~e~~G~Vv~vG~~v~~~~~   90 (361)
                      |+++.+...+.  .+++.+.+.|.+.+++|+||+.++++|++|+....|..+...+|.++|+|++|+|+++|+++..|++
T Consensus         1 m~a~~~~~~~~--~~~~~~~~~~~~~~~~v~v~v~~~~i~~~d~~~~~g~~~~~~~~~~~g~e~~G~V~~~G~~~~~~~~   78 (345)
T cd08260           1 MRAAVYEEFGE--PLEIREVPDPEPPPDGVVVEVEACGVCRSDWHGWQGHDPDVTLPHVPGHEFAGVVVEVGEDVSRWRV   78 (345)
T ss_pred             CeeEEEecCCC--CcEEEEccCCCCCCCeEEEEEEEeeccHHHHHHhcCCCCCCCCCeeeccceeEEEEEECCCCccCCC
Confidence            67777655443  3788889999999999999999999999999998887665566889999999999999999999999


Q ss_pred             CCEEEeccccCCCCCCcccccCCCCCCcchhcccccccCCCCcCCCcceeEEeecCC--ceEECCCCCCcccccccchhh
Q 018067           91 GDKVGVGCMVGSCRSCDSCAIDLENYCPKVIMTYANKYHDGTITYGGYSDIMVADEH--FVVRIPEGTPLDATAPLLCAG  168 (361)
Q Consensus        91 GdrV~~~~~~~~c~~c~~c~~~~~~~c~~~~~~~~~~~~~~~~~~g~~a~~v~v~~~--~~~~ip~~~~~~~aa~l~~~~  168 (361)
                      ||+|+.. +..+|++|.+|..|+.++|.+..+.       +....|+|++|+.++..  +++++|+++++++++.+++.+
T Consensus        79 Gd~V~~~-~~~~~~~~~~~~~~~~~~~~~~~~~-------~~~~~g~~~~~~~v~~~~~~~~~iP~~~~~~~aa~l~~~~  150 (345)
T cd08260          79 GDRVTVP-FVLGCGTCPYCRAGDSNVCEHQVQP-------GFTHPGSFAEYVAVPRADVNLVRLPDDVDFVTAAGLGCRF  150 (345)
T ss_pred             CCEEEEC-CCCCCCCCccccCcCcccCCCCccc-------ccCCCCcceeEEEcccccCceEECCCCCCHHHhhhhccch
Confidence            9999874 4458999999999999999975321       22347999999999974  899999999999999999999


Q ss_pred             hhhhhHhhhcCCCCCCCEEEEEcCChHHHHHHHHHHHcCCeEEEEeCCchhHHHHHHHcCCCEEecCCC-HHH---HHHh
Q 018067          169 ITVYSPLRFYGLDKPGMHVGVVGLGGLGHVAVKFAKAMGVKVTVISTSPSKKSEAIERLGADSFLVSRD-QDE---MQAA  244 (361)
Q Consensus       169 ~ta~~~l~~~~~~~~g~~vlV~Gag~vG~~a~~la~~~g~~vi~~~~~~~~~~~~~~~~g~~~vv~~~~-~~~---~~~~  244 (361)
                      .+||+++.....+.++++|+|+|+|.+|++++++|+.+|++|++++++++++..+ +++|++.+++++. .+.   +..+
T Consensus       151 ~ta~~~l~~~~~~~~~~~vlV~g~g~vg~~~~~~a~~~G~~vi~~~~~~~~~~~~-~~~g~~~~i~~~~~~~~~~~~~~~  229 (345)
T cd08260         151 ATAFRALVHQARVKPGEWVAVHGCGGVGLSAVMIASALGARVIAVDIDDDKLELA-RELGAVATVNASEVEDVAAAVRDL  229 (345)
T ss_pred             HHHHHHHHHccCCCCCCEEEEECCCHHHHHHHHHHHHcCCeEEEEeCCHHHHHHH-HHhCCCEEEccccchhHHHHHHHH
Confidence            9999998777778999999999999999999999999999999999988887666 7799999988876 433   2223


Q ss_pred             c-CCccEEEEcCCCcccHHHHHhccccCCEEEEecCCCCC---cccChHHHHhCCcEEEecccCCHHHHHHHHHHHHcCC
Q 018067          245 M-GTMDGIIDTVSAVHPLMPLIGLLKSQGKLVLVGAPEKP---LELPAFSLLMGRKIVGGSMIGGMKETQEMIDFAAKHN  320 (361)
Q Consensus       245 ~-~g~d~vid~~g~~~~~~~~~~~l~~~G~~v~~g~~~~~---~~~~~~~~~~~~~~i~g~~~~~~~~~~~~~~ll~~~~  320 (361)
                      . +++|++||++|+...+..++++++++|+++.+|.....   ..++...++.+++++.++.....+.++++++++++++
T Consensus       230 ~~~~~d~vi~~~g~~~~~~~~~~~l~~~g~~i~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~  309 (345)
T cd08260         230 TGGGAHVSVDALGIPETCRNSVASLRKRGRHVQVGLTLGEEAGVALPMDRVVARELEIVGSHGMPAHRYDAMLALIASGK  309 (345)
T ss_pred             hCCCCCEEEEcCCCHHHHHHHHHHhhcCCEEEEeCCcCCCCCccccCHHHHhhcccEEEeCCcCCHHHHHHHHHHHHcCC
Confidence            3 37999999999755588999999999999999975432   3455556668899999988777888999999999999


Q ss_pred             Ccee---EEEEecccHHHHHHHHHcCCCceEEEEE
Q 018067          321 IRAD---IEVIPADYVNTALERLAKADVRYRFVID  352 (361)
Q Consensus       321 ~~~~---~~~~~l~~~~~a~~~~~~~~~~gkvvi~  352 (361)
                      +.+.   .+.++++++++|++.+++++..||+|++
T Consensus       310 i~~~~~~~~~~~~~~~~~a~~~~~~~~~~~~~v~~  344 (345)
T cd08260         310 LDPEPLVGRTISLDEAPDALAAMDDYATAGITVIT  344 (345)
T ss_pred             CChhhheeEEecHHHHHHHHHHHHcCCCCceEEec
Confidence            8753   3899999999999999999888998863

NAD(P)(H)-dependent oxidoreductases are the major enzymes in the interconversion of alcohols and aldehydes, or ketones. This group has the characteristic catalytic and structural zinc sites of the zinc-dependent alcohol dehydrogenases. Alcohol dehydrogenase in the liver converts ethanol and NAD+ to acetaldehyde and NADH, while in yeast and some other microorganisms ADH catalyzes the conversion acetaldehyde to ethanol in alcoholic fermentation. ADH is a member of the medium chain alcohol dehydrogenase family (MDR), which has a NAD(P)(H)-binding domain in a Rossmann fold of a beta-alpha form. The NAD(H)-binding region is comprised of 2 structurally similar halves, each of which contacts a mononucleotide. A GxGxxG motif after the first mononucleotide contact half allows the close contact of the coenzyme with the ADH backbone. The N-terminal catalytic domain has a distant homology to GroES. These proteins typically form dimers (ty

>KOG0025 consensus Zn2+-binding dehydrogenase (nuclear receptor binding factor-1) [Transcription; Energy production and conversion]

Probab=100.00  E-value=1.3e-42  Score=296.34  Aligned_cols=317  Identities=22%  Similarity=0.274  Sum_probs=273.2

Q ss_pred             CCCCCCcccceeeeeecCCC-CCccceeeccCCCCCCeEEEEEeeeccCcchHHhHhcCCC-CCCCCCcccccccEEEEE
Q 018067            3 QAPEQEHPKNAFGWAAKDTS-GVLSPFHFSRRATGEKDVTFKVTHCGICHSDLHMIKNEWG-NTIYPIVPGHEIVGVVTE   80 (361)
Q Consensus         3 ~~~~~~~~~~~~~~~~~~~~-~~l~~~~~~~p~~~~~evlV~v~~~~i~~~D~~~~~g~~~-~~~~p~~lG~e~~G~Vv~   80 (361)
                      .+.+++...++++|..+++| +.++++.+++|+.+.++|+||++|+.|||+|+..++|-++ .+.+|.+-|.|++|+|+.
T Consensus        12 sa~q~~~~~kalvY~~hgdP~kVlql~~~~~p~~~~s~v~Vk~LAaPINPsDIN~IQGvYpvrP~~PAVgGnEGv~eVv~   91 (354)
T KOG0025|consen   12 SASQMPARSKALVYSEHGDPAKVLQLKNLELPAVPGSDVLVKMLAAPINPSDINQIQGVYPVRPELPAVGGNEGVGEVVA   91 (354)
T ss_pred             cccccccccceeeecccCCchhhheeecccCCCCCCCceeeeeeecCCChHHhhhhccccCCCCCCCcccCCcceEEEEE
Confidence            46678889999999999888 5578999999999999999999999999999999999887 458899999999999999


Q ss_pred             eCCCCCCCCCCCEEEeccccCCCCCCcccccCCCCCCcchhcccccccCCCCcCCCcceeEEeecCCceEECCCCCCccc
Q 018067           81 VGSKVSKFKVGDKVGVGCMVGSCRSCDSCAIDLENYCPKVIMTYANKYHDGTITYGGYSDIMVADEHFVVRIPEGTPLDA  160 (361)
Q Consensus        81 vG~~v~~~~~GdrV~~~~~~~~c~~c~~c~~~~~~~c~~~~~~~~~~~~~~~~~~g~~a~~v~v~~~~~~~ip~~~~~~~  160 (361)
                      +|+++.+|++||+|+..                                  ....|+|++|.+.+++.++++++.++++.
T Consensus        92 vGs~vkgfk~Gd~VIp~----------------------------------~a~lGtW~t~~v~~e~~Li~vd~~~pl~~  137 (354)
T KOG0025|consen   92 VGSNVKGFKPGDWVIPL----------------------------------SANLGTWRTEAVFSESDLIKVDKDIPLAS  137 (354)
T ss_pred             ecCCcCccCCCCeEeec----------------------------------CCCCccceeeEeecccceEEcCCcCChhh
Confidence            99999999999999742                                  24679999999999999999999999999


Q ss_pred             ccccchhhhhhhhHhhhcCCCCCCCEEEEEcC-ChHHHHHHHHHHHcCCeEEEEeCCchhHHHH---HHHcCCCEEecCC
Q 018067          161 TAPLLCAGITVYSPLRFYGLDKPGMHVGVVGL-GGLGHVAVKFAKAMGVKVTVISTSPSKKSEA---IERLGADSFLVSR  236 (361)
Q Consensus       161 aa~l~~~~~ta~~~l~~~~~~~~g~~vlV~Ga-g~vG~~a~~la~~~g~~vi~~~~~~~~~~~~---~~~~g~~~vv~~~  236 (361)
                      ||++.....|||.+|...-++++|++|+-.|+ +.+|++.+|+|++.|++.+.++|++...+++   .+.+||++++...
T Consensus       138 AAT~~VNP~TAyrmL~dfv~L~~GD~vIQNganS~VG~~ViQlaka~GiktinvVRdR~~ieel~~~Lk~lGA~~ViTee  217 (354)
T KOG0025|consen  138 AATLSVNPCTAYRMLKDFVQLNKGDSVIQNGANSGVGQAVIQLAKALGIKTINVVRDRPNIEELKKQLKSLGATEVITEE  217 (354)
T ss_pred             hheeccCchHHHHHHHHHHhcCCCCeeeecCcccHHHHHHHHHHHHhCcceEEEeecCccHHHHHHHHHHcCCceEecHH
Confidence            99999999999999999999999999999998 9999999999999999999999988665544   3567999987643


Q ss_pred             CH---HHHHH--hcCCccEEEEcCCCcccHHHHHhccccCCEEEEecCCCC-CcccChHHHHhCCcEEEecccCCH----
Q 018067          237 DQ---DEMQA--AMGTMDGIIDTVSAVHPLMPLIGLLKSQGKLVLVGAPEK-PLELPAFSLLMGRKIVGGSMIGGM----  306 (361)
Q Consensus       237 ~~---~~~~~--~~~g~d~vid~~g~~~~~~~~~~~l~~~G~~v~~g~~~~-~~~~~~~~~~~~~~~i~g~~~~~~----  306 (361)
                      +-   +....  ...++...|||+|+.+ .....+.|.+||.++.+|.++. ++.++...+++|++.+.|.+...+    
T Consensus       218 el~~~~~~k~~~~~~~prLalNcVGGks-a~~iar~L~~GgtmvTYGGMSkqPv~~~ts~lIFKdl~~rGfWvt~W~~~~  296 (354)
T KOG0025|consen  218 ELRDRKMKKFKGDNPRPRLALNCVGGKS-ATEIARYLERGGTMVTYGGMSKQPVTVPTSLLIFKDLKLRGFWVTRWKKEH  296 (354)
T ss_pred             HhcchhhhhhhccCCCceEEEeccCchh-HHHHHHHHhcCceEEEecCccCCCcccccchheeccceeeeeeeeehhhcc
Confidence            31   11111  1237999999999988 7788999999999999998764 578899999999999999987554    


Q ss_pred             -------HHHHHHHHHHHcCCCceeE-EEEecccHHHHHHHHHcCCCc-eEEEEEeC
Q 018067          307 -------KETQEMIDFAAKHNIRADI-EVIPADYVNTALERLAKADVR-YRFVIDVA  354 (361)
Q Consensus       307 -------~~~~~~~~ll~~~~~~~~~-~~~~l~~~~~a~~~~~~~~~~-gkvvi~~~  354 (361)
                             +.++++.+|+..|+++.+. +..+|++...|++........ ||-+|.++
T Consensus       297 ~~pe~~~~~i~~~~~l~~~G~i~~~~~e~v~L~~~~tald~~L~~~~~~~Kq~i~~e  353 (354)
T KOG0025|consen  297 KSPEERKEMIDELCDLYRRGKLKAPNCEKVPLADHKTALDAALSKFGKSGKQIIVLE  353 (354)
T ss_pred             CCcHHHHHHHHHHHHHHHcCeeccccceeeechhhhHHHHHHHHHhccCCceEEEec
Confidence                   3467888999999999877 889999999999966555443 67777664

>cd08240 6_hydroxyhexanoate_dh_like 6-hydroxyhexanoate dehydrogenase

Probab=100.00  E-value=6.6e-42  Score=320.33  Aligned_cols=331  Identities=31%  Similarity=0.457  Sum_probs=277.1

Q ss_pred             cceeeeeecCCCCCccceeeccCCCCCCeEEEEEeeeccCcchHHhHhcCCC------------CCCCCCcccccccEEE
Q 018067           11 KNAFGWAAKDTSGVLSPFHFSRRATGEKDVTFKVTHCGICHSDLHMIKNEWG------------NTIYPIVPGHEIVGVV   78 (361)
Q Consensus        11 ~~~~~~~~~~~~~~l~~~~~~~p~~~~~evlV~v~~~~i~~~D~~~~~g~~~------------~~~~p~~lG~e~~G~V   78 (361)
                      |+++.+...  ...++++++|.|+++++||+|++.++++|++|++.+.|.++            ...+|.++|||++|+|
T Consensus         1 ~~a~~~~~~--~~~~~~~~~~~p~~~~~ev~V~v~~~~i~~~d~~~~~g~~~~~~~~~~~~~~~~~~~~~~~g~e~~G~V   78 (350)
T cd08240           1 MKAAAVVEP--GKPLEEVEIDTPKPPGTEVLVKVTACGVCHSDLHIWDGGYDLGGGKTMSLDDRGVKLPLVLGHEIVGEV   78 (350)
T ss_pred             CeeEEeccC--CCCceEEecCCCCCCCCeEEEEEEEEecCchhHHHHcCCCCccccccccccccCCCCCcccccceeEEE
Confidence            456555443  34478889999999999999999999999999999887543            1244678999999999


Q ss_pred             EEeCCCCCCCCCCCEEEeccccCCCCCCcccccCCCCCCcchhcccccccCCCCcCCCcceeEEeecCCceEECCCCCCc
Q 018067           79 TEVGSKVSKFKVGDKVGVGCMVGSCRSCDSCAIDLENYCPKVIMTYANKYHDGTITYGGYSDIMVADEHFVVRIPEGTPL  158 (361)
Q Consensus        79 v~vG~~v~~~~~GdrV~~~~~~~~c~~c~~c~~~~~~~c~~~~~~~~~~~~~~~~~~g~~a~~v~v~~~~~~~ip~~~~~  158 (361)
                      +++|++++.+++||+|+..++. .|+.|..|.++..+.|.+..+.       +....|++++|+.++.+.++++|+++++
T Consensus        79 ~~vG~~v~~~~~Gd~V~~~~~~-~~~~~~~~~~~~~~~~~~~~~~-------~~~~~g~~~~~~~~~~~~~~~~p~~~s~  150 (350)
T cd08240          79 VAVGPDAADVKVGDKVLVYPWI-GCGECPVCLAGDENLCAKGRAL-------GIFQDGGYAEYVIVPHSRYLVDPGGLDP  150 (350)
T ss_pred             EeeCCCCCCCCCCCEEEECCcC-CCCCChHHHCcCcccCCCCCce-------eeeccCcceeeEEecHHHeeeCCCCCCH
Confidence            9999999999999999887777 8999999999999999774322       2235789999999999999999999999


Q ss_pred             ccccccchhhhhhhhHhhhcCCCCCCCEEEEEcCChHHHHHHHHHHHcCC-eEEEEeCCchhHHHHHHHcCCCEEecCCC
Q 018067          159 DATAPLLCAGITVYSPLRFYGLDKPGMHVGVVGLGGLGHVAVKFAKAMGV-KVTVISTSPSKKSEAIERLGADSFLVSRD  237 (361)
Q Consensus       159 ~~aa~l~~~~~ta~~~l~~~~~~~~g~~vlV~Gag~vG~~a~~la~~~g~-~vi~~~~~~~~~~~~~~~~g~~~vv~~~~  237 (361)
                      .+++.+.+.+.+||++++....++++++|+|+|+|.+|++++|+|+..|+ +|+++++++++...+ +++|++.+++.++
T Consensus       151 ~~aa~l~~~~~tA~~~~~~~~~~~~~~~vlI~g~g~vg~~~~~~a~~~G~~~v~~~~~~~~~~~~~-~~~g~~~~~~~~~  229 (350)
T cd08240         151 ALAATLACSGLTAYSAVKKLMPLVADEPVVIIGAGGLGLMALALLKALGPANIIVVDIDEAKLEAA-KAAGADVVVNGSD  229 (350)
T ss_pred             HHeehhhchhhhHHHHHHhcccCCCCCEEEEECCcHHHHHHHHHHHHcCCCeEEEEeCCHHHHHHH-HHhCCcEEecCCC
Confidence            99999999999999999888776789999999889999999999999999 677777776666555 7899988888765


Q ss_pred             HH---HHHHhcC-CccEEEEcCCCcccHHHHHhccccCCEEEEecCCCCCcccChHHHHhCCcEEEecccCCHHHHHHHH
Q 018067          238 QD---EMQAAMG-TMDGIIDTVSAVHPLMPLIGLLKSQGKLVLVGAPEKPLELPAFSLLMGRKIVGGSMIGGMKETQEMI  313 (361)
Q Consensus       238 ~~---~~~~~~~-g~d~vid~~g~~~~~~~~~~~l~~~G~~v~~g~~~~~~~~~~~~~~~~~~~i~g~~~~~~~~~~~~~  313 (361)
                      .+   .+.+... ++|++||++|....+..++++++++|+++.+|..+.....+......+++++.++.....+++..++
T Consensus       230 ~~~~~~~~~~~~~~~d~vid~~g~~~~~~~~~~~l~~~g~~v~~g~~~~~~~~~~~~~~~~~~~i~~~~~~~~~~~~~~~  309 (350)
T cd08240         230 PDAAKRIIKAAGGGVDAVIDFVNNSATASLAFDILAKGGKLVLVGLFGGEATLPLPLLPLRALTIQGSYVGSLEELRELV  309 (350)
T ss_pred             ccHHHHHHHHhCCCCcEEEECCCCHHHHHHHHHHhhcCCeEEEECCCCCCCcccHHHHhhcCcEEEEcccCCHHHHHHHH
Confidence            43   3333333 7999999999766689999999999999999876544333444455689999998887778899999


Q ss_pred             HHHHcCCCceeE-EEEecccHHHHHHHHHcCCCceEEEEE
Q 018067          314 DFAAKHNIRADI-EVIPADYVNTALERLAKADVRYRFVID  352 (361)
Q Consensus       314 ~ll~~~~~~~~~-~~~~l~~~~~a~~~~~~~~~~gkvvi~  352 (361)
                      ++++++.+++.. ..|+++++++|++.+.+++..||+++.
T Consensus       310 ~ll~~~~i~~~~~~~~~~~~~~~a~~~~~~~~~~gkvvv~  349 (350)
T cd08240         310 ALAKAGKLKPIPLTERPLSDVNDALDDLKAGKVVGRAVLK  349 (350)
T ss_pred             HHHHcCCCccceeeEEcHHHHHHHHHHHHcCCccceEEec
Confidence            999999988654 899999999999999998888999875

6-hydroxyhexanoate dehydrogenase, an enzyme of the zinc-dependent alcohol dehydrogenase-like family of medium chain dehydrogenases/reductases catalyzes the conversion of 6-hydroxyhexanoate and NAD(+) to 6-oxohexanoate + NADH and H+. NAD(P)(H)-dependent oxidoreductases are the major enzymes in the interconversion of alcohols and aldehydes, or ketones. Alcohol dehydrogenase in the liver converts ethanol and NAD+ to acetaldehyde and NADH, while in yeast and some other microorganisms ADH catalyzes the conversion acetaldehyde to ethanol in alcoholic fermentation. ADH is a member of the medium chain alcohol dehydrogenase family (MDR), which has a NAD(P)(H)-binding domain in a Rossmann fold of a beta-alpha form. The NAD(H)-binding region is comprised of 2 structurally similar halves, each of which contacts a mononucleotide. A GxGxxG motif after the first mononucleotide contact half allows the close contact of the coenzy

>cd08291 ETR_like_1 2-enoyl thioester reductase (ETR) like proteins, child 1

Probab=100.00  E-value=3.3e-42  Score=319.00  Aligned_cols=303  Identities=20%  Similarity=0.256  Sum_probs=250.0

Q ss_pred             cceeeeeecCCC---CCccceeeccCCCCCCeEEEEEeeeccCcchHHhHhcCCCC-CCCCCcccccccEEEEEeCCCCC
Q 018067           11 KNAFGWAAKDTS---GVLSPFHFSRRATGEKDVTFKVTHCGICHSDLHMIKNEWGN-TIYPIVPGHEIVGVVTEVGSKVS   86 (361)
Q Consensus        11 ~~~~~~~~~~~~---~~l~~~~~~~p~~~~~evlV~v~~~~i~~~D~~~~~g~~~~-~~~p~~lG~e~~G~Vv~vG~~v~   86 (361)
                      |+++.+..+++|   ..+++.++|.|.|+++||+||++++++|++|++.+.|.++. ..+|.++|||++|+|+++|++++
T Consensus         1 m~a~~~~~~~~~~~~~~~~~~~~~~p~~~~~evlv~v~~~gi~~~d~~~~~g~~~~~~~~p~v~G~e~~G~V~~vG~~v~   80 (324)
T cd08291           1 MKALLLEEYGKPLEVKELSLPEPEVPEPGPGEVLIKVEAAPINPSDLGFLKGQYGSTKALPVPPGFEGSGTVVAAGGGPL   80 (324)
T ss_pred             CeEEEEeecCCCccccEEEecccCCCCCCCCeEEEEEEEccCCHHHHHHhcCcCCCCCCCCcCCCcceEEEEEEECCCcc
Confidence            677777776666   57888889999999999999999999999999998886542 35688999999999999999999


Q ss_pred             C-CCCCCEEEeccccCCCCCCcccccCCCCCCcchhcccccccCCCCcCCCcceeEEeecCCceEECCCCCCcccccccc
Q 018067           87 K-FKVGDKVGVGCMVGSCRSCDSCAIDLENYCPKVIMTYANKYHDGTITYGGYSDIMVADEHFVVRIPEGTPLDATAPLL  165 (361)
Q Consensus        87 ~-~~~GdrV~~~~~~~~c~~c~~c~~~~~~~c~~~~~~~~~~~~~~~~~~g~~a~~v~v~~~~~~~ip~~~~~~~aa~l~  165 (361)
                      + |++||||+..+                                  ..+|+|+||+.++.+.++++|++++++++++++
T Consensus        81 ~~~~vGd~V~~~~----------------------------------~~~g~~a~~~~v~~~~~~~iP~~~~~~~aa~~~  126 (324)
T cd08291          81 AQSLIGKRVAFLA----------------------------------GSYGTYAEYAVADAQQCLPLPDGVSFEQGASSF  126 (324)
T ss_pred             ccCCCCCEEEecC----------------------------------CCCCcchheeeecHHHeEECCCCCCHHHHhhhc
Confidence            6 99999997421                                  114899999999999999999999999999888


Q ss_pred             hhhhhhhhHhhhcCCCCCCCEEEEE-c-CChHHHHHHHHHHHcCCeEEEEeCCchhHHHHHHHcCCCEEecCCCHHH---
Q 018067          166 CAGITVYSPLRFYGLDKPGMHVGVV-G-LGGLGHVAVKFAKAMGVKVTVISTSPSKKSEAIERLGADSFLVSRDQDE---  240 (361)
Q Consensus       166 ~~~~ta~~~l~~~~~~~~g~~vlV~-G-ag~vG~~a~~la~~~g~~vi~~~~~~~~~~~~~~~~g~~~vv~~~~~~~---  240 (361)
                      +.+.|||.++. .... ++++++|+ | +|++|++++|+|+.+|++|+++++++++++.+ +++|++++++++..+.   
T Consensus       127 ~~~~ta~~~~~-~~~~-~~~~vlv~~~g~g~vG~~a~q~a~~~G~~vi~~~~~~~~~~~~-~~~g~~~~i~~~~~~~~~~  203 (324)
T cd08291         127 VNPLTALGMLE-TARE-EGAKAVVHTAAASALGRMLVRLCKADGIKVINIVRRKEQVDLL-KKIGAEYVLNSSDPDFLED  203 (324)
T ss_pred             ccHHHHHHHHH-hhcc-CCCcEEEEccCccHHHHHHHHHHHHcCCEEEEEeCCHHHHHHH-HHcCCcEEEECCCccHHHH
Confidence            88999986554 3443 56667665 4 59999999999999999999998888776555 7899999998876543   


Q ss_pred             HHHhcC--CccEEEEcCCCcccHHHHHhccccCCEEEEecCCCCC-c-ccChHHHHhCCcEEEecccCC------HHHHH
Q 018067          241 MQAAMG--TMDGIIDTVSAVHPLMPLIGLLKSQGKLVLVGAPEKP-L-ELPAFSLLMGRKIVGGSMIGG------MKETQ  310 (361)
Q Consensus       241 ~~~~~~--g~d~vid~~g~~~~~~~~~~~l~~~G~~v~~g~~~~~-~-~~~~~~~~~~~~~i~g~~~~~------~~~~~  310 (361)
                      +.+++.  ++|++||++|+.. ....+++++++|+++.+|..... . .++...++.+++++.++....      .++++
T Consensus       204 v~~~~~~~~~d~vid~~g~~~-~~~~~~~l~~~G~~v~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  282 (324)
T cd08291         204 LKELIAKLNATIFFDAVGGGL-TGQILLAMPYGSTLYVYGYLSGKLDEPIDPVDLIFKNKSIEGFWLTTWLQKLGPEVVK  282 (324)
T ss_pred             HHHHhCCCCCcEEEECCCcHH-HHHHHHhhCCCCEEEEEEecCCCCcccCCHHHHhhcCcEEEEEEHHHhhcccCHHHHH
Confidence            334433  7999999999877 77889999999999999975432 2 255666778999998877543      34678


Q ss_pred             HHHHHHHcCCCceeE-EEEecccHHHHHHHHHcCCCceEEEEE
Q 018067          311 EMIDFAAKHNIRADI-EVIPADYVNTALERLAKADVRYRFVID  352 (361)
Q Consensus       311 ~~~~ll~~~~~~~~~-~~~~l~~~~~a~~~~~~~~~~gkvvi~  352 (361)
                      +++++++ +++++.+ ++|+|+|+++||+.+.+++..||+++.
T Consensus       283 ~~~~~~~-~~~~~~i~~~~~l~~~~~a~~~~~~~~~~Gkvv~~  324 (324)
T cd08291         283 KLKKLVK-TELKTTFASRYPLALTLEAIAFYSKNMSTGKKLLI  324 (324)
T ss_pred             HHHHHHh-CccccceeeEEcHHHHHHHHHHHHhCCCCCeEEeC
Confidence            8888887 8898877 899999999999999999988999873

2-enoyl thioester reductase (ETR) like proteins. ETR catalyzes the NADPH-dependent conversion of trans-2-enoyl acyl carrier protein/coenzyme A (ACP/CoA) to acyl-(ACP/CoA) in fatty acid synthesis. 2-enoyl thioester reductase activity has been linked in Candida tropicalis as essential in maintaining mitiochondrial respiratory function. This ETR family is a part of the medium chain dehydrogenase/reductase family, but lack the zinc coordination sites characteristic of the 2-enoyl thioester reductase (ETR) like proteins. ETR catalyzes the NADPH-dependent dependent conversion of trans-2-enoyl acyl carrier protein/coenzyme A (ACP/CoA) to acyl-(ACP/CoA) in fatty acid synthesis. 2-enoyl thioester reductase activity has been linked in Candida tropicalis as essential in maintaining mitiochondrial respiratory function. This ETR family is a part of the medium chain dehydrogenase/reductase family, but lack the zinc coordin

>cd05279 Zn_ADH1 Liver alcohol dehydrogenase and related zinc-dependent alcohol dehydrogenases

Probab=100.00  E-value=1.8e-41  Score=318.90  Aligned_cols=327  Identities=23%  Similarity=0.387  Sum_probs=267.1

Q ss_pred             CCCCCccceeeccCCCCCCeEEEEEeeeccCcchHHhHhcCCCCCCCCCcccccccEEEEEeCCCCCCCCCCCEEEeccc
Q 018067           20 DTSGVLSPFHFSRRATGEKDVTFKVTHCGICHSDLHMIKNEWGNTIYPIVPGHEIVGVVTEVGSKVSKFKVGDKVGVGCM   99 (361)
Q Consensus        20 ~~~~~l~~~~~~~p~~~~~evlV~v~~~~i~~~D~~~~~g~~~~~~~p~~lG~e~~G~Vv~vG~~v~~~~~GdrV~~~~~   99 (361)
                      ..++.+++++++.|.+++++|+|++.++++|++|++.+.+... ..+|.++|||++|+|+++|++++.+++||+|++.+.
T Consensus         8 ~~~~~~~~~~~~~p~~~~~~vlv~v~~~~i~~~d~~~~~g~~~-~~~~~i~g~e~~G~V~~vG~~v~~~~~Gd~Vv~~~~   86 (365)
T cd05279           8 EKGKPLSIEEIEVAPPKAGEVRIKVVATGVCHTDLHVIDGKLP-TPLPVILGHEGAGIVESIGPGVTTLKPGDKVIPLFG   86 (365)
T ss_pred             cCCCCcEEEEeecCCCCCCeEEEEEEEeeecchhHHHhcCCCC-CCCCcccccceeEEEEEeCCCcccCCCCCEEEEcCC
Confidence            3455688999999999999999999999999999999888654 356789999999999999999999999999988765


Q ss_pred             cCCCCCCcccccCCCCCCcchhcccccc-cC-------------CCCcCCCcceeEEeecCCceEECCCCCCcccccccc
Q 018067          100 VGSCRSCDSCAIDLENYCPKVIMTYANK-YH-------------DGTITYGGYSDIMVADEHFVVRIPEGTPLDATAPLL  165 (361)
Q Consensus       100 ~~~c~~c~~c~~~~~~~c~~~~~~~~~~-~~-------------~~~~~~g~~a~~v~v~~~~~~~ip~~~~~~~aa~l~  165 (361)
                       .+|++|.+|.++.+++|+........+ ..             .+....|+|++|+.++.+.++++|+++++++++.+.
T Consensus        87 -~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~g~~a~~~~v~~~~~~~lP~~~~~~~a~~~~  165 (365)
T cd05279          87 -PQCGKCKQCLNPRPNLCSKSRGTNGRGLMSDGTSRFTCKGKPIHHFLGTSTFAEYTVVSEISLAKIDPDAPLEKVCLIG  165 (365)
T ss_pred             -CCCCCChhhcCCCcccCCCcccccccccccCCcceeeccCCccccccccccccceEEecCCceEECCCCCCHHHhhHhc
Confidence             499999999999999998754321111 10             111135799999999999999999999999999999


Q ss_pred             hhhhhhhhHhhhcCCCCCCCEEEEEcCChHHHHHHHHHHHcCCe-EEEEeCCchhHHHHHHHcCCCEEecCCCH--HH--
Q 018067          166 CAGITVYSPLRFYGLDKPGMHVGVVGLGGLGHVAVKFAKAMGVK-VTVISTSPSKKSEAIERLGADSFLVSRDQ--DE--  240 (361)
Q Consensus       166 ~~~~ta~~~l~~~~~~~~g~~vlV~Gag~vG~~a~~la~~~g~~-vi~~~~~~~~~~~~~~~~g~~~vv~~~~~--~~--  240 (361)
                      +++.+||+++.....+++|++|||+|+|++|++++++|+.+|++ +++++++++++..+ +++|++.+++.++.  +.  
T Consensus       166 ~~~~ta~~al~~~~~~~~g~~vlI~g~g~vG~~a~~~a~~~G~~~v~~~~~~~~~~~~~-~~~g~~~~v~~~~~~~~~~~  244 (365)
T cd05279         166 CGFSTGYGAAVNTAKVTPGSTCAVFGLGGVGLSVIMGCKAAGASRIIAVDINKDKFEKA-KQLGATECINPRDQDKPIVE  244 (365)
T ss_pred             cchhHHHHHHHhccCCCCCCEEEEECCCHHHHHHHHHHHHcCCCeEEEEeCCHHHHHHH-HHhCCCeecccccccchHHH
Confidence            99999999988888899999999998899999999999999996 55555566665555 88999988887654  32  


Q ss_pred             -HHHhc-CCccEEEEcCCCcccHHHHHhccc-cCCEEEEecCCC--CCcccChHHHHhCCcEEEeccc---CCHHHHHHH
Q 018067          241 -MQAAM-GTMDGIIDTVSAVHPLMPLIGLLK-SQGKLVLVGAPE--KPLELPAFSLLMGRKIVGGSMI---GGMKETQEM  312 (361)
Q Consensus       241 -~~~~~-~g~d~vid~~g~~~~~~~~~~~l~-~~G~~v~~g~~~--~~~~~~~~~~~~~~~~i~g~~~---~~~~~~~~~  312 (361)
                       +.++. +++|++||++|....+..++++++ ++|+++.+|...  ....++...+ .++.++.|+..   ...+.+.++
T Consensus       245 ~l~~~~~~~~d~vid~~g~~~~~~~~~~~l~~~~G~~v~~g~~~~~~~~~~~~~~~-~~~~~l~g~~~~~~~~~~~~~~~  323 (365)
T cd05279         245 VLTEMTDGGVDYAFEVIGSADTLKQALDATRLGGGTSVVVGVPPSGTEATLDPNDL-LTGRTIKGTVFGGWKSKDSVPKL  323 (365)
T ss_pred             HHHHHhCCCCcEEEECCCCHHHHHHHHHHhccCCCEEEEEecCCCCCceeeCHHHH-hcCCeEEEEeccCCchHhHHHHH
Confidence             33333 479999999997556889999999 999999998753  3456666666 67788888754   344678899


Q ss_pred             HHHHHcCCCcee---EEEEecccHHHHHHHHHcCCCceEEEE
Q 018067          313 IDFAAKHNIRAD---IEVIPADYVNTALERLAKADVRYRFVI  351 (361)
Q Consensus       313 ~~ll~~~~~~~~---~~~~~l~~~~~a~~~~~~~~~~gkvvi  351 (361)
                      ++++.++.+++.   .++++++++++||+.+.+++. .|+++
T Consensus       324 ~~l~~~~~l~~~~~~~~~~~l~~~~~a~~~~~~~~~-~~~~~  364 (365)
T cd05279         324 VALYRQKKFPLDELITHVLPFEEINDGFDLMRSGES-IRTIL  364 (365)
T ss_pred             HHHHHcCCcchhHheeeeecHHHHHHHHHHHhCCCc-eeeee
Confidence            999999998753   389999999999999988775 46665

NAD(P)(H)-dependent oxidoreductases are the major enzymes in the interconversion of alcohols and aldehydes, or ketones. Alcohol dehydrogenase in the liver converts ethanol and NAD+ to acetaldehyde and NADH, while in yeast and some other microorganisms ADH catalyzes the conversion acetaldehyde to ethanol in alcoholic fermentation. There are 7 vertebrate ADH 7 classes, 6 of which have been identified in humans. Class III, glutathione-dependent formaldehyde dehydrogenase, has been identified as the primordial form and exists in diverse species, including plants, micro-organisms, vertebrates, and invertebrates. Class I, typified by liver dehydrogenase, is an evolving form. Gene duplication and functional specialization of ADH into ADH classes and subclasses created numerous forms in vertebrates. For example, the A, B and C (formerly alpha, beta, gamma) human class I subunits have high overall

>cd08256 Zn_ADH2 Alcohol dehydrogenases of the MDR family

Probab=100.00  E-value=1.3e-41  Score=318.25  Aligned_cols=328  Identities=20%  Similarity=0.254  Sum_probs=264.2

Q ss_pred             cceeeeeecCCCCCccceeeccCCCCCCeEEEEEeeeccCcchHHhHhcCCCC---------CCCCCcccccccEEEEEe
Q 018067           11 KNAFGWAAKDTSGVLSPFHFSRRATGEKDVTFKVTHCGICHSDLHMIKNEWGN---------TIYPIVPGHEIVGVVTEV   81 (361)
Q Consensus        11 ~~~~~~~~~~~~~~l~~~~~~~p~~~~~evlV~v~~~~i~~~D~~~~~g~~~~---------~~~p~~lG~e~~G~Vv~v   81 (361)
                      |+++.+.   +|+.+++++++.|++.+++|+||++++++|++|++.+.|....         ..+|.++|||++|+|+++
T Consensus         1 mka~~~~---~~~~~~~~~~~~p~~~~~~v~V~v~a~~i~~~d~~~~~g~~~~~~~~~~~~~~~~p~~~g~e~~G~v~~v   77 (350)
T cd08256           1 MRAVVCH---GPQDYRLEEVPVPRPGPGEILVKVEACGICAGDIKCYHGAPSFWGDENQPPYVKPPMIPGHEFVGRVVEL   77 (350)
T ss_pred             CeeEEEe---cCCceEEEECCCCCCCCCeEEEEEEEEEEcccchhhhcCCCccccccccCccCCCCcccCcceeEEEEEe
Confidence            5555553   5667899999999999999999999999999999988775311         145778999999999999


Q ss_pred             CCCCC--CCCCCCEEEeccccCCCCCCcccccCCCCCCcchhcccccccCCCCcCCCcceeEEeecCC-ceEECCCCCCc
Q 018067           82 GSKVS--KFKVGDKVGVGCMVGSCRSCDSCAIDLENYCPKVIMTYANKYHDGTITYGGYSDIMVADEH-FVVRIPEGTPL  158 (361)
Q Consensus        82 G~~v~--~~~~GdrV~~~~~~~~c~~c~~c~~~~~~~c~~~~~~~~~~~~~~~~~~g~~a~~v~v~~~-~~~~ip~~~~~  158 (361)
                      |++++  .|++||+|+..+ ..+|++|.+|..+..+.|....  +.+.   .....|+|++|+.++++ .++++|+++++
T Consensus        78 G~~v~~~~~~~Gd~V~~~~-~~~~~~~~~~~~~~~~~~~~~~--~~g~---~~~~~g~~~~~~~~~~~~~~~~lP~~~~~  151 (350)
T cd08256          78 GEGAEERGVKVGDRVISEQ-IVPCWNCRFCNRGQYWMCQKHD--LYGF---QNNVNGGMAEYMRFPKEAIVHKVPDDIPP  151 (350)
T ss_pred             CCCcccCCCCCCCEEEECC-cCCCCCChHHhCcCcccCcCcc--ceee---ccCCCCcceeeEEcccccceEECCCCCCH
Confidence            99998  899999997654 4599999999999999997542  1111   11257999999999988 57899999999


Q ss_pred             ccccccchhhhhhhhHhhhcCCCCCCCEEEEEcCChHHHHHHHHHHHcCCeE-EEEeCCchhHHHHHHHcCCCEEecCCC
Q 018067          159 DATAPLLCAGITVYSPLRFYGLDKPGMHVGVVGLGGLGHVAVKFAKAMGVKV-TVISTSPSKKSEAIERLGADSFLVSRD  237 (361)
Q Consensus       159 ~~aa~l~~~~~ta~~~l~~~~~~~~g~~vlV~Gag~vG~~a~~la~~~g~~v-i~~~~~~~~~~~~~~~~g~~~vv~~~~  237 (361)
                      ++++.+ .++.++|+++ ...++++|++|+|.|+|.+|++++++|+++|+++ +++++++++ ..+++++|++.+++++.
T Consensus       152 ~~aa~~-~~~~ta~~a~-~~~~~~~g~~vlI~g~g~vG~~~~~~a~~~G~~~v~~~~~~~~~-~~~~~~~g~~~v~~~~~  228 (350)
T cd08256         152 EDAILI-EPLACALHAV-DRANIKFDDVVVLAGAGPLGLGMIGAARLKNPKKLIVLDLKDER-LALARKFGADVVLNPPE  228 (350)
T ss_pred             HHHhhh-hHHHHHHHHH-HhcCCCCCCEEEEECCCHHHHHHHHHHHHcCCcEEEEEcCCHHH-HHHHHHcCCcEEecCCC
Confidence            999888 8889999998 5567899999999778999999999999999864 455555544 56668899998888765


Q ss_pred             H---HHHHHhcC--CccEEEEcCCCcccHHHHHhccccCCEEEEecCCCCCcccChHHH-HhCCcEEEecccCCHHHHHH
Q 018067          238 Q---DEMQAAMG--TMDGIIDTVSAVHPLMPLIGLLKSQGKLVLVGAPEKPLELPAFSL-LMGRKIVGGSMIGGMKETQE  311 (361)
Q Consensus       238 ~---~~~~~~~~--g~d~vid~~g~~~~~~~~~~~l~~~G~~v~~g~~~~~~~~~~~~~-~~~~~~i~g~~~~~~~~~~~  311 (361)
                      .   +.+..+..  ++|++||++|+...+..++++++++|+++.+|.......+....+ ..+++++.++.... ..+++
T Consensus       229 ~~~~~~~~~~~~~~~vdvvld~~g~~~~~~~~~~~l~~~G~~v~~g~~~~~~~~~~~~~~~~~~~~i~~~~~~~-~~~~~  307 (350)
T cd08256         229 VDVVEKIKELTGGYGCDIYIEATGHPSAVEQGLNMIRKLGRFVEFSVFGDPVTVDWSIIGDRKELDVLGSHLGP-YCYPI  307 (350)
T ss_pred             cCHHHHHHHHhCCCCCCEEEECCCChHHHHHHHHHhhcCCEEEEEccCCCCCccChhHhhcccccEEEEeccCc-hhHHH
Confidence            3   33444443  699999999975558899999999999999987654444444333 35778888876544 46888


Q ss_pred             HHHHHHcCCCce---eEEEEecccHHHHHHHHHcCCCceEEEE
Q 018067          312 MIDFAAKHNIRA---DIEVIPADYVNTALERLAKADVRYRFVI  351 (361)
Q Consensus       312 ~~~ll~~~~~~~---~~~~~~l~~~~~a~~~~~~~~~~gkvvi  351 (361)
                      ++++++++.+++   ..+.|+++++++|++.+++++..+|+++
T Consensus       308 ~~~~~~~g~l~~~~~~~~~~~l~~~~~a~~~~~~~~~~~kvv~  350 (350)
T cd08256         308 AIDLIASGRLPTDGIVTHQFPLEDFEEAFELMARGDDSIKVVL  350 (350)
T ss_pred             HHHHHHcCCCChhHheEEEeEHHHHHHHHHHHHhCCCceEEeC
Confidence            999999999986   3489999999999999999988889874

This group has the characteristic catalytic and structural zinc-binding sites of the zinc-dependent alcohol dehydrogenases of the MDR family. The medium chain dehydrogenases/reductase (MDR)/zinc-dependent alcohol dehydrogenase-like family, which contains the zinc-dependent alcohol dehydrogenase (ADH-Zn) and related proteins, is a diverse group of proteins related to the first identified member, class I mammalian ADH. MDRs display a broad range of activities and are distinguished from the smaller short chain dehydrogenases (~ 250 amino acids vs. the ~ 350 amino acids of the MDR). The MDR proteins have 2 domains: a C-terminal NAD(P)-binding Rossmann fold domain of a beta-alpha form and an N-terminal catalytic domain with distant homology to GroES. The MDR group contains a host of activities, including the founding alcohol dehydrogenase (ADH), quinone reductase, sorbitol dehydrogenase, formaldehyde dehydrogenase, butanediol DH,

>cd08245 CAD Cinnamyl alcohol dehydrogenases (CAD) and related proteins

Probab=100.00  E-value=2.3e-41  Score=314.05  Aligned_cols=320  Identities=47%  Similarity=0.823  Sum_probs=277.0

Q ss_pred             CCccceeeccCCCCCCeEEEEEeeeccCcchHHhHhcCCCCCCCCCcccccccEEEEEeCCCCCCCCCCCEEEeccccCC
Q 018067           23 GVLSPFHFSRRATGEKDVTFKVTHCGICHSDLHMIKNEWGNTIYPIVPGHEIVGVVTEVGSKVSKFKVGDKVGVGCMVGS  102 (361)
Q Consensus        23 ~~l~~~~~~~p~~~~~evlV~v~~~~i~~~D~~~~~g~~~~~~~p~~lG~e~~G~Vv~vG~~v~~~~~GdrV~~~~~~~~  102 (361)
                      +.+++.+++.|.+.+++++|++.++++|++|++.+.|......+|.++|||++|+|+++|+++++|++||+|++.++..+
T Consensus        10 ~~~~~~~~~~~~~~~~~v~v~v~~~~i~~~d~~~~~g~~~~~~~p~~~g~e~~G~v~~~g~~~~~~~~Gd~V~~~~~~~~   89 (330)
T cd08245          10 GPLEPEEVPVPEPGPGEVLIKIEACGVCHTDLHAAEGDWGGSKYPLVPGHEIVGEVVEVGAGVEGRKVGDRVGVGWLVGS   89 (330)
T ss_pred             CCceEEeccCCCCCCCeEEEEEEEEeccHHHHHHHcCCCCCCCCCcccCccceEEEEEECCCCcccccCCEEEEccccCC
Confidence            57888999999999999999999999999999998886654567889999999999999999999999999998777678


Q ss_pred             CCCCcccccCCCCCCcchhcccccccCCCCcCCCcceeEEeecCCceEECCCCCCcccccccchhhhhhhhHhhhcCCCC
Q 018067          103 CRSCDSCAIDLENYCPKVIMTYANKYHDGTITYGGYSDIMVADEHFVVRIPEGTPLDATAPLLCAGITVYSPLRFYGLDK  182 (361)
Q Consensus       103 c~~c~~c~~~~~~~c~~~~~~~~~~~~~~~~~~g~~a~~v~v~~~~~~~ip~~~~~~~aa~l~~~~~ta~~~l~~~~~~~  182 (361)
                      |++|.+|.++..+.|++..+.       +....|+|++|+.++.++++++|+++++.+++.+.+.+.+||+++.. ..++
T Consensus        90 ~~~~~~~~~~~~~~~~~~~~~-------~~~~~g~~~~~~~v~~~~~~~~p~~~~~~~~~~l~~~~~ta~~~l~~-~~~~  161 (330)
T cd08245          90 CGRCEYCRRGLENLCQKAVNT-------GYTTQGGYAEYMVADAEYTVLLPDGLPLAQAAPLLCAGITVYSALRD-AGPR  161 (330)
T ss_pred             CCCChhhhCcCcccCcCcccc-------CcccCCccccEEEEcHHHeEECCCCCCHHHhhhhhhhHHHHHHHHHh-hCCC
Confidence            999999999999999986442       22357899999999999999999999999999999999999999976 5689


Q ss_pred             CCCEEEEEcCChHHHHHHHHHHHcCCeEEEEeCCchhHHHHHHHcCCCEEecCCCHHHHHHhcCCccEEEEcCCCcccHH
Q 018067          183 PGMHVGVVGLGGLGHVAVKFAKAMGVKVTVISTSPSKKSEAIERLGADSFLVSRDQDEMQAAMGTMDGIIDTVSAVHPLM  262 (361)
Q Consensus       183 ~g~~vlV~Gag~vG~~a~~la~~~g~~vi~~~~~~~~~~~~~~~~g~~~vv~~~~~~~~~~~~~g~d~vid~~g~~~~~~  262 (361)
                      ++++|+|+|+|.+|++++++|+.+|++|++++++++++..+ +++|++.+++....+......+++|++||+++......
T Consensus       162 ~~~~vlI~g~g~iG~~~~~~a~~~G~~v~~~~~~~~~~~~~-~~~g~~~~~~~~~~~~~~~~~~~~d~vi~~~~~~~~~~  240 (330)
T cd08245         162 PGERVAVLGIGGLGHLAVQYARAMGFETVAITRSPDKRELA-RKLGADEVVDSGAELDEQAAAGGADVILVTVVSGAAAE  240 (330)
T ss_pred             CCCEEEEECCCHHHHHHHHHHHHCCCEEEEEeCCHHHHHHH-HHhCCcEEeccCCcchHHhccCCCCEEEECCCcHHHHH
Confidence            99999999988899999999999999999999998887666 77899888876654433333357999999988766688


Q ss_pred             HHHhccccCCEEEEecCCCCC-cccChHHHHhCCcEEEecccCCHHHHHHHHHHHHcCCCceeEEEEecccHHHHHHHHH
Q 018067          263 PLIGLLKSQGKLVLVGAPEKP-LELPAFSLLMGRKIVGGSMIGGMKETQEMIDFAAKHNIRADIEVIPADYVNTALERLA  341 (361)
Q Consensus       263 ~~~~~l~~~G~~v~~g~~~~~-~~~~~~~~~~~~~~i~g~~~~~~~~~~~~~~ll~~~~~~~~~~~~~l~~~~~a~~~~~  341 (361)
                      .++++++++|+++.+|..... ..+....++.++.++.++.....+.++++++++.++.+.+.++.+++++++++|+.+.
T Consensus       241 ~~~~~l~~~G~~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ll~~~~l~~~~~~~~~~~~~~a~~~~~  320 (330)
T cd08245         241 AALGGLRRGGRIVLVGLPESPPFSPDIFPLIMKRQSIAGSTHGGRADLQEALDFAAEGKVKPMIETFPLDQANEAYERME  320 (330)
T ss_pred             HHHHhcccCCEEEEECCCCCCccccchHHHHhCCCEEEEeccCCHHHHHHHHHHHHcCCCcceEEEEcHHHHHHHHHHHH
Confidence            999999999999999865432 2233455777899999988888888999999999999987668999999999999999


Q ss_pred             cCCCceEEEE
Q 018067          342 KADVRYRFVI  351 (361)
Q Consensus       342 ~~~~~gkvvi  351 (361)
                      +++..||+++
T Consensus       321 ~~~~~~~~v~  330 (330)
T cd08245         321 KGDVRFRFVL  330 (330)
T ss_pred             cCCCCcceeC
Confidence            9998888874

Cinnamyl alcohol dehydrogenases (CAD), members of the medium chain dehydrogenase/reductase family, reduce cinnamaldehydes to cinnamyl alcohols in the last step of monolignal metabolism in plant cells walls. CAD binds 2 zinc ions and is NADPH- dependent. CAD family members are also found in non-plant species, e.g. in yeast where they have an aldehyde reductase activity. The medium chain dehydrogenases/reductase (MDR)/zinc-dependent alcohol dehydrogenase-like family, which contains the zinc-dependent alcohol dehydrogenase (ADH-Zn) and related proteins, is a diverse group of proteins related to the first identified member, class I mammalian ADH. MDRs display a broad range of activities and are distinguished from the smaller short chain dehydrogenases (~ 250 amino acids vs. the ~ 350 amino acids of the MDR). The MDR proteins have 2 domains: a C-terminal NAD(P) binding-Rossmann fold domain of a beta-alpha form and an

>PLN03154 putative allyl alcohol dehydrogenase; Provisional

Probab=100.00  E-value=1.8e-41  Score=316.39  Aligned_cols=295  Identities=20%  Similarity=0.178  Sum_probs=241.3

Q ss_pred             CCcccee---eccC-CCCCCeEEEEEeeeccCcchHHhHhcCCCCCCCCCcccc--cccEEEEEeCCCCCCCCCCCEEEe
Q 018067           23 GVLSPFH---FSRR-ATGEKDVTFKVTHCGICHSDLHMIKNEWGNTIYPIVPGH--EIVGVVTEVGSKVSKFKVGDKVGV   96 (361)
Q Consensus        23 ~~l~~~~---~~~p-~~~~~evlV~v~~~~i~~~D~~~~~g~~~~~~~p~~lG~--e~~G~Vv~vG~~v~~~~~GdrV~~   96 (361)
                      ++|++++   .+.| ++++||||||++++++|+.|...+.+......+|+++|+  |++|+|+.+|+++++|++||||+.
T Consensus        25 ~~f~~~~~~~~~~~~~~~~gevlVkv~a~~inp~~~~~~~~~~~~~~~p~~~G~~~~~~G~v~~vg~~v~~~~~Gd~V~~  104 (348)
T PLN03154         25 TDMEVKLGNKIELKAPKGSGAFLVKNLYLSCDPYMRGRMRDFHDSYLPPFVPGQRIEGFGVSKVVDSDDPNFKPGDLISG  104 (348)
T ss_pred             ccEEEEeecccCCCCCCCCCeEEEEEEEEccCHHHHHhhhccCCCCCCCcCCCCeeEeeEEEEEEecCCCCCCCCCEEEe
Confidence            5566666   3555 458999999999999999987655432322346889998  889999999999999999999962


Q ss_pred             ccccCCCCCCcccccCCCCCCcchhcccccccCCCCcCCCcceeEEeecCCc--eEE--CCCCCCcc-cccccchhhhhh
Q 018067           97 GCMVGSCRSCDSCAIDLENYCPKVIMTYANKYHDGTITYGGYSDIMVADEHF--VVR--IPEGTPLD-ATAPLLCAGITV  171 (361)
Q Consensus        97 ~~~~~~c~~c~~c~~~~~~~c~~~~~~~~~~~~~~~~~~g~~a~~v~v~~~~--~~~--ip~~~~~~-~aa~l~~~~~ta  171 (361)
                                                            .|+|+||+.++.+.  +++  +|++++++ +|+++++++.||
T Consensus       105 --------------------------------------~~~~aey~~v~~~~~~~~~~~~P~~~~~~~~aa~l~~~~~TA  146 (348)
T PLN03154        105 --------------------------------------ITGWEEYSLIRSSDNQLRKIQLQDDIPLSYHLGLLGMAGFTA  146 (348)
T ss_pred             --------------------------------------cCCcEEEEEEeccccceEEccCcCCCCHHHHHHHcccHHHHH
Confidence                                                  36799999998753  544  59999986 688999999999


Q ss_pred             hhHhhhcCCCCCCCEEEEEcC-ChHHHHHHHHHHHcCCeEEEEeCCchhHHHHHHHcCCCEEecCCCH-H---HHHHhcC
Q 018067          172 YSPLRFYGLDKPGMHVGVVGL-GGLGHVAVKFAKAMGVKVTVISTSPSKKSEAIERLGADSFLVSRDQ-D---EMQAAMG  246 (361)
Q Consensus       172 ~~~l~~~~~~~~g~~vlV~Ga-g~vG~~a~~la~~~g~~vi~~~~~~~~~~~~~~~~g~~~vv~~~~~-~---~~~~~~~  246 (361)
                      |+++.....+++|++|||+|+ |++|++++|+|+.+|++|++++++++++..+.+++|++.++++++. +   .+...++
T Consensus       147 ~~al~~~~~~~~g~~VlV~GaaG~vG~~aiqlAk~~G~~Vi~~~~~~~k~~~~~~~lGa~~vi~~~~~~~~~~~i~~~~~  226 (348)
T PLN03154        147 YAGFYEVCSPKKGDSVFVSAASGAVGQLVGQLAKLHGCYVVGSAGSSQKVDLLKNKLGFDEAFNYKEEPDLDAALKRYFP  226 (348)
T ss_pred             HHHHHHhcCCCCCCEEEEecCccHHHHHHHHHHHHcCCEEEEEcCCHHHHHHHHHhcCCCEEEECCCcccHHHHHHHHCC
Confidence            999987788899999999998 9999999999999999999988888776666447999999988642 2   2333333


Q ss_pred             -CccEEEEcCCCcccHHHHHhccccCCEEEEecCCCCC-c-----ccChHHHHhCCcEEEecccCC-----HHHHHHHHH
Q 018067          247 -TMDGIIDTVSAVHPLMPLIGLLKSQGKLVLVGAPEKP-L-----ELPAFSLLMGRKIVGGSMIGG-----MKETQEMID  314 (361)
Q Consensus       247 -g~d~vid~~g~~~~~~~~~~~l~~~G~~v~~g~~~~~-~-----~~~~~~~~~~~~~i~g~~~~~-----~~~~~~~~~  314 (361)
                       ++|++||++|+.. +..++++++++|+++.+|..++. .     .++...++.+++++.|+....     .+.++++++
T Consensus       227 ~gvD~v~d~vG~~~-~~~~~~~l~~~G~iv~~G~~~~~~~~~~~~~~~~~~~~~k~~~i~g~~~~~~~~~~~~~~~~~~~  305 (348)
T PLN03154        227 EGIDIYFDNVGGDM-LDAALLNMKIHGRIAVCGMVSLNSLSASQGIHNLYNLISKRIRMQGFLQSDYLHLFPQFLENVSR  305 (348)
T ss_pred             CCcEEEEECCCHHH-HHHHHHHhccCCEEEEECccccCCCCCCCCcccHHHHhhccceEEEEEHHHHHHHHHHHHHHHHH
Confidence             7999999999865 89999999999999999975432 1     124556788999999987543     245788999


Q ss_pred             HHHcCCCceeE-EEEecccHHHHHHHHHcCCCceEEEEEeCCc
Q 018067          315 FAAKHNIRADI-EVIPADYVNTALERLAKADVRYRFVIDVANT  356 (361)
Q Consensus       315 ll~~~~~~~~~-~~~~l~~~~~a~~~~~~~~~~gkvvi~~~~~  356 (361)
                      ++++|++++.+ .+|+|+++++||+.+.+++..||+|+.+.++
T Consensus       306 l~~~G~l~~~~~~~~~L~~~~~A~~~l~~g~~~GKvVl~~~~~  348 (348)
T PLN03154        306 YYKQGKIVYIEDMSEGLESAPAALVGLFSGKNVGKQVIRVAKE  348 (348)
T ss_pred             HHHCCCccCceecccCHHHHHHHHHHHHcCCCCceEEEEecCC
Confidence            99999999877 5899999999999999999999999998653

>cd08264 Zn_ADH_like2 Alcohol dehydrogenases of the MDR family

Probab=100.00  E-value=2.5e-41  Score=313.26  Aligned_cols=322  Identities=26%  Similarity=0.362  Sum_probs=267.0

Q ss_pred             cceeeeeecCCCCCccceeeccCCCCCCeEEEEEeeeccCcchHHhHhcCCCCCCCCCcccccccEEEEEeCCCCCCCCC
Q 018067           11 KNAFGWAAKDTSGVLSPFHFSRRATGEKDVTFKVTHCGICHSDLHMIKNEWGNTIYPIVPGHEIVGVVTEVGSKVSKFKV   90 (361)
Q Consensus        11 ~~~~~~~~~~~~~~l~~~~~~~p~~~~~evlV~v~~~~i~~~D~~~~~g~~~~~~~p~~lG~e~~G~Vv~vG~~v~~~~~   90 (361)
                      |+++.+...+ +..+++++.+.|+++++||+||+.++++|++|++.+.+.. ...+|.++|||++|+|+++|++++.|++
T Consensus         1 ~~~~~~~~~~-~~~~~~~~~~~~~~~~~ev~v~v~~~~i~~~d~~~~~~~~-~~~~~~~~g~e~~G~v~~vG~~v~~~~~   78 (325)
T cd08264           1 MKALVFEKSG-IENLKVEDVKDPKPGPGEVLIRVKMAGVNPVDYNVINAVK-VKPMPHIPGAEFAGVVEEVGDHVKGVKK   78 (325)
T ss_pred             CeeEEeccCC-CCceEEEeccCCCCCCCeEEEEEEEEEechHHHHHHhCCC-CCCCCeecccceeEEEEEECCCCCCCCC
Confidence            5666664433 5678888888888999999999999999999998876422 1235778999999999999999999999


Q ss_pred             CCEEEeccccCCCCCCcccccCCCCCCcchhcccccccCCCCcCCCcceeEEeecCCceEECCCCCCcccccccchhhhh
Q 018067           91 GDKVGVGCMVGSCRSCDSCAIDLENYCPKVIMTYANKYHDGTITYGGYSDIMVADEHFVVRIPEGTPLDATAPLLCAGIT  170 (361)
Q Consensus        91 GdrV~~~~~~~~c~~c~~c~~~~~~~c~~~~~~~~~~~~~~~~~~g~~a~~v~v~~~~~~~ip~~~~~~~aa~l~~~~~t  170 (361)
                      ||+|++.+.. +|++|.+|..|++++|++..+.       +....|+|++|+.++.+.++++|+++++++++.+++.+.+
T Consensus        79 Gd~V~~~~~~-~~~~c~~~~~~~~~~~~~~~~~-------~~~~~g~~~~~~~v~~~~~~~~p~~~~~~~~~~~~~~~~~  150 (325)
T cd08264          79 GDRVVVYNRV-FDGTCDMCLSGNEMLCRNGGII-------GVVSNGGYAEYIVVPEKNLFKIPDSISDELAASLPVAALT  150 (325)
T ss_pred             CCEEEECCCc-CCCCChhhcCCCccccCcccee-------eccCCCceeeEEEcCHHHceeCCCCCCHHHhhhhhhhhHH
Confidence            9999887665 8999999999999999975432       3335789999999999999999999999999999999999


Q ss_pred             hhhHhhhcCCCCCCCEEEEEcC-ChHHHHHHHHHHHcCCeEEEEeCCchhHHHHHHHcCCCEEecCCC-HHHHHHhcCCc
Q 018067          171 VYSPLRFYGLDKPGMHVGVVGL-GGLGHVAVKFAKAMGVKVTVISTSPSKKSEAIERLGADSFLVSRD-QDEMQAAMGTM  248 (361)
Q Consensus       171 a~~~l~~~~~~~~g~~vlV~Ga-g~vG~~a~~la~~~g~~vi~~~~~~~~~~~~~~~~g~~~vv~~~~-~~~~~~~~~g~  248 (361)
                      ||+++.. ..+++|++|+|+|+ |++|++++++|+++|++|+++++    . ...+++|++++++.++ .+.+..+.+++
T Consensus       151 a~~~l~~-~~~~~g~~vlI~g~~g~vg~~~~~~a~~~G~~v~~~~~----~-~~~~~~g~~~~~~~~~~~~~l~~~~~~~  224 (325)
T cd08264         151 AYHALKT-AGLGPGETVVVFGASGNTGIFAVQLAKMMGAEVIAVSR----K-DWLKEFGADEVVDYDEVEEKVKEITKMA  224 (325)
T ss_pred             HHHHHHh-cCCCCCCEEEEECCCchHHHHHHHHHHHcCCeEEEEeH----H-HHHHHhCCCeeecchHHHHHHHHHhCCC
Confidence            9999976 67899999999998 99999999999999999988763    2 3337799988887654 23344444789


Q ss_pred             cEEEEcCCCcccHHHHHhccccCCEEEEecCCC-CCcccChHHHHhCCcEEEecccCCHHHHHHHHHHHHcCCCceeEEE
Q 018067          249 DGIIDTVSAVHPLMPLIGLLKSQGKLVLVGAPE-KPLELPAFSLLMGRKIVGGSMIGGMKETQEMIDFAAKHNIRADIEV  327 (361)
Q Consensus       249 d~vid~~g~~~~~~~~~~~l~~~G~~v~~g~~~-~~~~~~~~~~~~~~~~i~g~~~~~~~~~~~~~~ll~~~~~~~~~~~  327 (361)
                      |+++|++|+.. +..++++++++|+++.+|... ....++...++.++.++.++..+..++++++++++...++ ...+.
T Consensus       225 d~vl~~~g~~~-~~~~~~~l~~~g~~v~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~-~~~~~  302 (325)
T cd08264         225 DVVINSLGSSF-WDLSLSVLGRGGRLVTFGTLTGGEVKLDLSDLYSKQISIIGSTGGTRKELLELVKIAKDLKV-KVWKT  302 (325)
T ss_pred             CEEEECCCHHH-HHHHHHhhccCCEEEEEecCCCCCCccCHHHHhhcCcEEEEccCCCHHHHHHHHHHHHcCCc-eeEEE
Confidence            99999999865 899999999999999998742 2355666777788999999988888899999999964442 23389


Q ss_pred             EecccHHHHHHHHHcCCCceEEE
Q 018067          328 IPADYVNTALERLAKADVRYRFV  350 (361)
Q Consensus       328 ~~l~~~~~a~~~~~~~~~~gkvv  350 (361)
                      |+++++++|++.+.+++..+|++
T Consensus       303 ~~~~~~~~a~~~~~~~~~~~kv~  325 (325)
T cd08264         303 FKLEEAKEALKELFSKERDGRIL  325 (325)
T ss_pred             EcHHHHHHHHHHHHcCCCccccC
Confidence            99999999999999887767753

This group resembles the zinc-dependent alcohol dehydrogenases of the medium chain dehydrogenase family. However, this subgroup does not contain the characteristic catalytic zinc site. Also, it contains an atypical structural zinc-binding pattern: DxxCxxCxxxxxxxC. NAD(P)(H)-dependent oxidoreductases are the major enzymes in the interconversion of alcohols and aldehydes, or ketones. Alcohol dehydrogenase in the liver converts ethanol and NAD+ to acetaldehyde and NADH, while in yeast and some other microorganisms ADH catalyzes the conversion acetaldehyde to ethanol in alcoholic fermentation. ADH is a member of the medium chain alcohol dehydrogenase family (MDR), which has a NAD(P)(H)-binding domain in a Rossmann fold of a beta-alpha form. The NAD(H)-binding region is comprised of 2 structurally similar halves, each of which contacts a mononucleotide. A GxGxxG motif after the first mononucleotide contact half allows the clo

>cd08297 CAD3 Cinnamyl alcohol dehydrogenases (CAD)

Probab=100.00  E-value=5.6e-41  Score=312.96  Aligned_cols=333  Identities=32%  Similarity=0.586  Sum_probs=285.1

Q ss_pred             cceeeeeecCCCCCccceeeccCCCCCCeEEEEEeeeccCcchHHhHhcCCCC-CCCCCcccccccEEEEEeCCCCCCCC
Q 018067           11 KNAFGWAAKDTSGVLSPFHFSRRATGEKDVTFKVTHCGICHSDLHMIKNEWGN-TIYPIVPGHEIVGVVTEVGSKVSKFK   89 (361)
Q Consensus        11 ~~~~~~~~~~~~~~l~~~~~~~p~~~~~evlV~v~~~~i~~~D~~~~~g~~~~-~~~p~~lG~e~~G~Vv~vG~~v~~~~   89 (361)
                      |+++.+...+ +..+++.+++.|.+.++|++||+.++++|++|+..+.|..+. ...|..+|||++|+|+++|++++.|+
T Consensus         1 m~a~~~~~~~-~~~~~~~~~~~~~~~~~~v~v~v~~~~i~~~d~~~~~g~~~~~~~~~~~~g~e~~G~V~~vG~~~~~~~   79 (341)
T cd08297           1 MKAAVVEEFG-EKPYEVKDVPVPEPGPGEVLVKLEASGVCHTDLHAALGDWPVKPKLPLIGGHEGAGVVVAVGPGVSGLK   79 (341)
T ss_pred             CceEEeeccC-CCCceEEEeeCCCCCCCeEEEEEEEeecchhHHHHHcCCCCcCCCCCccCCcccceEEEEeCCCCCCCC
Confidence            6777776544 568899999999999999999999999999999988876542 24466899999999999999999999


Q ss_pred             CCCEEEeccccCCCCCCcccccCCCCCCcchhcccccccCCCCcCCCcceeEEeecCCceEECCCCCCcccccccchhhh
Q 018067           90 VGDKVGVGCMVGSCRSCDSCAIDLENYCPKVIMTYANKYHDGTITYGGYSDIMVADEHFVVRIPEGTPLDATAPLLCAGI  169 (361)
Q Consensus        90 ~GdrV~~~~~~~~c~~c~~c~~~~~~~c~~~~~~~~~~~~~~~~~~g~~a~~v~v~~~~~~~ip~~~~~~~aa~l~~~~~  169 (361)
                      +||+|+..+...+|+.|.+|..+..++|....+.       +....|+|++|+.++.+.++++|+++++.+++.++..+.
T Consensus        80 ~Gd~V~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-------~~~~~g~~~s~~~~~~~~~~~lp~~~~~~~~a~l~~~~~  152 (341)
T cd08297          80 VGDRVGVKWLYDACGKCEYCRTGDETLCPNQKNS-------GYTVDGTFAEYAIADARYVTPIPDGLSFEQAAPLLCAGV  152 (341)
T ss_pred             CCCEEEEecCCCCCCCCccccCCCcccCCCcccc-------ccccCCcceeEEEeccccEEECCCCCCHHHHHHHHcchH
Confidence            9999987766668999999999999999875322       334578999999999999999999999999999999999


Q ss_pred             hhhhHhhhcCCCCCCCEEEEEcC-ChHHHHHHHHHHHcCCeEEEEeCCchhHHHHHHHcCCCEEecCCCHHH---HHHhc
Q 018067          170 TVYSPLRFYGLDKPGMHVGVVGL-GGLGHVAVKFAKAMGVKVTVISTSPSKKSEAIERLGADSFLVSRDQDE---MQAAM  245 (361)
Q Consensus       170 ta~~~l~~~~~~~~g~~vlV~Ga-g~vG~~a~~la~~~g~~vi~~~~~~~~~~~~~~~~g~~~vv~~~~~~~---~~~~~  245 (361)
                      |||+++... .++++++|||+|+ +.+|++++++|+++|++|+++++++++...+ +++|++.++++++.+.   +.+..
T Consensus       153 ta~~~~~~~-~~~~~~~vlV~g~~~~vg~~~~~~a~~~g~~v~~~~~~~~~~~~~-~~~g~~~v~~~~~~~~~~~~~~~~  230 (341)
T cd08297         153 TVYKALKKA-GLKPGDWVVISGAGGGLGHLGVQYAKAMGLRVIAIDVGDEKLELA-KELGADAFVDFKKSDDVEAVKELT  230 (341)
T ss_pred             HHHHHHHhc-CCCCCCEEEEECCCchHHHHHHHHHHHCCCeEEEEeCCHHHHHHH-HHcCCcEEEcCCCccHHHHHHHHh
Confidence            999998775 6899999999998 6799999999999999999999998887666 7899999888876433   33443


Q ss_pred             --CCccEEEEcCCCcccHHHHHhccccCCEEEEecCCCCC-cccChHHHHhCCcEEEecccCCHHHHHHHHHHHHcCCCc
Q 018067          246 --GTMDGIIDTVSAVHPLMPLIGLLKSQGKLVLVGAPEKP-LELPAFSLLMGRKIVGGSMIGGMKETQEMIDFAAKHNIR  322 (361)
Q Consensus       246 --~g~d~vid~~g~~~~~~~~~~~l~~~G~~v~~g~~~~~-~~~~~~~~~~~~~~i~g~~~~~~~~~~~~~~ll~~~~~~  322 (361)
                        .++|++||+.++...+..++++++++|+++.+|..+.. ..++...++.+++++.++.....++++++++++.+++++
T Consensus       231 ~~~~vd~vl~~~~~~~~~~~~~~~l~~~g~~v~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~  310 (341)
T cd08297         231 GGGGAHAVVVTAVSAAAYEQALDYLRPGGTLVCVGLPPGGFIPLDPFDLVLRGITIVGSLVGTRQDLQEALEFAARGKVK  310 (341)
T ss_pred             cCCCCCEEEEcCCchHHHHHHHHHhhcCCEEEEecCCCCCCCCCCHHHHHhcccEEEEeccCCHHHHHHHHHHHHcCCCc
Confidence              37999999887766688999999999999999976543 356666677899999997776678999999999999998


Q ss_pred             eeEEEEecccHHHHHHHHHcCCCceEEEEEe
Q 018067          323 ADIEVIPADYVNTALERLAKADVRYRFVIDV  353 (361)
Q Consensus       323 ~~~~~~~l~~~~~a~~~~~~~~~~gkvvi~~  353 (361)
                      +.++.|++++++++++.+.+++..||+++++
T Consensus       311 ~~~~~~~~~~~~~a~~~~~~~~~~gkvvi~~  341 (341)
T cd08297         311 PHIQVVPLEDLNEVFEKMEEGKIAGRVVVDF  341 (341)
T ss_pred             ceeEEEcHHHHHHHHHHHHcCCccceEEEeC
Confidence            7668899999999999999998889999875

These alcohol dehydrogenases are related to the cinnamyl alcohol dehydrogenases (CAD), members of the medium chain dehydrogenase/reductase family. NAD(P)(H)-dependent oxidoreductases are the major enzymes in the interconversion of alcohols and aldehydes, or ketones. Cinnamyl alcohol dehydrogenases (CAD) reduce cinnamaldehydes to cinnamyl alcohols in the last step of monolignal metabolism in plant cells walls. CAD binds 2 zinc ions and is NADPH- dependent. CAD family members are also found in non-plant species, e.g. in yeast where they have an aldehyde reductase activity. The medium chain dehydrogenases/reductase (MDR)/zinc-dependent alcohol dehydrogenase-like family, which contains the zinc-dependent alcohol dehydrogenase (ADH-Zn) and related proteins, is a diverse group of proteins related to the first identified member, class I mammalian ADH. MDRs display a broad range of activities and are distinguished from the smaller short cha

>cd05278 FDH_like Formaldehyde dehydrogenases

Probab=100.00  E-value=3.4e-41  Score=315.11  Aligned_cols=333  Identities=23%  Similarity=0.340  Sum_probs=272.1

Q ss_pred             cceeeeeecCCCCCccceeeccCCC-CCCeEEEEEeeeccCcchHHhHhcCCCCCCCCCcccccccEEEEEeCCCCCCCC
Q 018067           11 KNAFGWAAKDTSGVLSPFHFSRRAT-GEKDVTFKVTHCGICHSDLHMIKNEWGNTIYPIVPGHEIVGVVTEVGSKVSKFK   89 (361)
Q Consensus        11 ~~~~~~~~~~~~~~l~~~~~~~p~~-~~~evlV~v~~~~i~~~D~~~~~g~~~~~~~p~~lG~e~~G~Vv~vG~~v~~~~   89 (361)
                      |+++.+.   .++.+.+.++|.|.+ .++||+||+.++++|++|++.+.|.++...+|.++|+|++|+|+++|+++++|+
T Consensus         1 ~ka~~~~---~~~~~~~~~~~~p~~~~~~~v~i~v~~~~i~~~d~~~~~g~~~~~~~~~~~g~e~~G~V~~vG~~v~~~~   77 (347)
T cd05278           1 MKALVYL---GPGKIGLEEVPDPKIQGPHDAIVRVTATSICGSDLHIYRGGVPGAKHGMILGHEFVGEVVEVGSDVKRLK   77 (347)
T ss_pred             CceEEEe---cCCceEEEEcCCCCCCCCCeEEEEEEEEEechhhHHHHcCCCCCCCCCceeccceEEEEEEECCCccccC
Confidence            4555553   455688889999999 999999999999999999999988776667789999999999999999999999


Q ss_pred             CCCEEEeccccCCCCCCcccccCCCCCCcchhcccccccCCCCcCCCcceeEEeecCC--ceEECCCCCCcccccccchh
Q 018067           90 VGDKVGVGCMVGSCRSCDSCAIDLENYCPKVIMTYANKYHDGTITYGGYSDIMVADEH--FVVRIPEGTPLDATAPLLCA  167 (361)
Q Consensus        90 ~GdrV~~~~~~~~c~~c~~c~~~~~~~c~~~~~~~~~~~~~~~~~~g~~a~~v~v~~~--~~~~ip~~~~~~~aa~l~~~  167 (361)
                      +||+|+..+ .++||.|.+|..+..++|.+.....    ..+....|+|++|+.++.+  +++++|+++++++++.+++.
T Consensus        78 ~Gd~V~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~----~~~~~~~g~~~~~~~v~~~~~~~~~lP~~~~~~~aa~l~~~  152 (347)
T cd05278          78 PGDRVSVPC-ITFCGRCRFCRRGYHAHCENGLWGW----KLGNRIDGGQAEYVRVPYADMNLAKIPDGLPDEDALMLSDI  152 (347)
T ss_pred             CCCEEEecC-CCCCCCChhHhCcCcccCcCCCccc----ccccCCCCeeeEEEEecchhCeEEECCCCCCHHHHhhhcch
Confidence            999998764 4599999999999999998753221    1223457999999999987  89999999999999999999


Q ss_pred             hhhhhhHhhhcCCCCCCCEEEEEcCChHHHHHHHHHHHcCC-eEEEEeCCchhHHHHHHHcCCCEEecCCCHHH---HHH
Q 018067          168 GITVYSPLRFYGLDKPGMHVGVVGLGGLGHVAVKFAKAMGV-KVTVISTSPSKKSEAIERLGADSFLVSRDQDE---MQA  243 (361)
Q Consensus       168 ~~ta~~~l~~~~~~~~g~~vlV~Gag~vG~~a~~la~~~g~-~vi~~~~~~~~~~~~~~~~g~~~vv~~~~~~~---~~~  243 (361)
                      +.|||+++ ...++++|++|||.|+|.+|++++|+|+.+|+ +++++++++++. ++++++|++.++++++.+.   +..
T Consensus       153 ~~ta~~~~-~~~~~~~~~~VlI~g~g~vg~~~iqlak~~g~~~v~~~~~~~~~~-~~~~~~g~~~vi~~~~~~~~~~i~~  230 (347)
T cd05278         153 LPTGFHGA-ELAGIKPGSTVAVIGAGPVGLCAVAGARLLGAARIIAVDSNPERL-DLAKEAGATDIINPKNGDIVEQILE  230 (347)
T ss_pred             hhheeehh-hhcCCCCCCEEEEECCCHHHHHHHHHHHHcCCCEEEEEeCCHHHH-HHHHHhCCcEEEcCCcchHHHHHHH
Confidence            99999998 55678999999998889999999999999997 788876665554 5557899999888876543   333


Q ss_pred             hc--CCccEEEEcCCCcccHHHHHhccccCCEEEEecCCCCCccc-ChHHHHhCCcEEEecccCCHHHHHHHHHHHHcCC
Q 018067          244 AM--GTMDGIIDTVSAVHPLMPLIGLLKSQGKLVLVGAPEKPLEL-PAFSLLMGRKIVGGSMIGGMKETQEMIDFAAKHN  320 (361)
Q Consensus       244 ~~--~g~d~vid~~g~~~~~~~~~~~l~~~G~~v~~g~~~~~~~~-~~~~~~~~~~~i~g~~~~~~~~~~~~~~ll~~~~  320 (361)
                      +.  .++|++||++|+...+..++++++++|+++.+|........ .....+.+++++.++.....+.++++++++.++.
T Consensus       231 ~~~~~~~d~vld~~g~~~~~~~~~~~l~~~G~~v~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  310 (347)
T cd05278         231 LTGGRGVDCVIEAVGFEETFEQAVKVVRPGGTIANVGVYGKPDPLPLLGEWFGKNLTFKTGLVPVRARMPELLDLIEEGK  310 (347)
T ss_pred             HcCCCCCcEEEEccCCHHHHHHHHHHhhcCCEEEEEcCCCCCcccCccchhhhceeEEEeeccCchhHHHHHHHHHHcCC
Confidence            33  37999999999854588999999999999999865433211 1122346788888766555678999999999999


Q ss_pred             Ccee---EEEEecccHHHHHHHHHcCCC-ceEEEEEe
Q 018067          321 IRAD---IEVIPADYVNTALERLAKADV-RYRFVIDV  353 (361)
Q Consensus       321 ~~~~---~~~~~l~~~~~a~~~~~~~~~-~gkvvi~~  353 (361)
                      +++.   ...++++++++|++.+..++. .+|+++++
T Consensus       311 l~~~~~~~~~~~~~~~~~a~~~~~~~~~~~~~~vv~~  347 (347)
T cd05278         311 IDPSKLITHRFPLDDILKAYRLFDNKPDGCIKVVIRP  347 (347)
T ss_pred             CChhHcEEEEecHHHHHHHHHHHhcCCCCceEEEecC
Confidence            8863   378999999999999988887 68988763

Formaldehyde dehydrogenase (FDH) is a member of the zinc-dependent/medium chain alcohol dehydrogenase family. Formaldehyde dehydrogenase (aka ADH3) may be the ancestral form of alcohol dehydrogenase, which evolved to detoxify formaldehyde. This CD contains glutathione dependant FDH, glutathione independent FDH, and related alcohol dehydrogenases. FDH converts formaldehyde and NAD(P) to formate and NAD(P)H. The initial step in this process the spontaneous formation of a S-(hydroxymethyl)glutathione adduct from formaldehyde and glutathione, followed by FDH-mediated oxidation (and detoxification) of the adduct to S-formylglutathione. Unlike typical FDH, Pseudomonas putida aldehyde-dismutating FDH (PFDH) is glutathione-independent. The medium chain alcohol dehydrogenase family (MDR) have a NAD(P)(H)-binding domain in a Rossmann fold of a beta-alpha form. The N-terminal region typically has an all-beta catalytic domain. These proteins typicall

>cd08298 CAD2 Cinnamyl alcohol dehydrogenases (CAD)

Probab=100.00  E-value=4.7e-41  Score=311.91  Aligned_cols=326  Identities=31%  Similarity=0.495  Sum_probs=275.3

Q ss_pred             cceeeeeecCCC--CCccceeeccCCCCCCeEEEEEeeeccCcchHHhHhcCCCCCCCCCcccccccEEEEEeCCCCCCC
Q 018067           11 KNAFGWAAKDTS--GVLSPFHFSRRATGEKDVTFKVTHCGICHSDLHMIKNEWGNTIYPIVPGHEIVGVVTEVGSKVSKF   88 (361)
Q Consensus        11 ~~~~~~~~~~~~--~~l~~~~~~~p~~~~~evlV~v~~~~i~~~D~~~~~g~~~~~~~p~~lG~e~~G~Vv~vG~~v~~~   88 (361)
                      |+++.+...++|  ..+++++.+.|.+.++||+||+.++++|++|++.+.|..+...+|.++|||++|+|+++|+++.+|
T Consensus         1 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ev~irv~~~~i~~~d~~~~~g~~~~~~~~~~~g~e~~G~V~~vG~~v~~~   80 (329)
T cd08298           1 MKAMVLEKPGPIEENPLRLTEVPVPEPGPGEVLIKVEACGVCRTDLHIVEGDLPPPKLPLIPGHEIVGRVEAVGPGVTRF   80 (329)
T ss_pred             CeEEEEecCCCCCCCCceEEeccCCCCCCCEEEEEEEEEeccHHHHHHHhCCCCCCCCCccccccccEEEEEECCCCCCC
Confidence            556666544432  367777888888999999999999999999999988876655668899999999999999999999


Q ss_pred             CCCCEEEeccccCCCCCCcccccCCCCCCcchhcccccccCCCCcCCCcceeEEeecCCceEECCCCCCcccccccchhh
Q 018067           89 KVGDKVGVGCMVGSCRSCDSCAIDLENYCPKVIMTYANKYHDGTITYGGYSDIMVADEHFVVRIPEGTPLDATAPLLCAG  168 (361)
Q Consensus        89 ~~GdrV~~~~~~~~c~~c~~c~~~~~~~c~~~~~~~~~~~~~~~~~~g~~a~~v~v~~~~~~~ip~~~~~~~aa~l~~~~  168 (361)
                      ++||+|++.+...+|++|.+|..+.+++|+...+.       +....|+|++|+.++.+.++++|+++++.+++.+++.+
T Consensus        81 ~~Gd~V~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-------~~~~~g~~~~~~~~~~~~~~~lp~~~~~~~~~~~~~~~  153 (329)
T cd08298          81 SVGDRVGVPWLGSTCGECRYCRSGRENLCDNARFT-------GYTVDGGYAEYMVADERFAYPIPEDYDDEEAAPLLCAG  153 (329)
T ss_pred             cCCCEEEEeccCCCCCCChhHhCcChhhCCCcccc-------ccccCCceEEEEEecchhEEECCCCCCHHHhhHhhhhh
Confidence            99999988776678999999999999999976543       33357899999999999999999999999999999999


Q ss_pred             hhhhhHhhhcCCCCCCCEEEEEcCChHHHHHHHHHHHcCCeEEEEeCCchhHHHHHHHcCCCEEecCCCHHHHHHhcCCc
Q 018067          169 ITVYSPLRFYGLDKPGMHVGVVGLGGLGHVAVKFAKAMGVKVTVISTSPSKKSEAIERLGADSFLVSRDQDEMQAAMGTM  248 (361)
Q Consensus       169 ~ta~~~l~~~~~~~~g~~vlV~Gag~vG~~a~~la~~~g~~vi~~~~~~~~~~~~~~~~g~~~vv~~~~~~~~~~~~~g~  248 (361)
                      .+||+++ ..++++++++++|+|+|++|++++++++..|++|++++++++++..+ +++|++.+++....     ...++
T Consensus       154 ~ta~~~~-~~~~~~~~~~vlV~g~g~vg~~~~~la~~~g~~v~~~~~~~~~~~~~-~~~g~~~~~~~~~~-----~~~~v  226 (329)
T cd08298         154 IIGYRAL-KLAGLKPGQRLGLYGFGASAHLALQIARYQGAEVFAFTRSGEHQELA-RELGADWAGDSDDL-----PPEPL  226 (329)
T ss_pred             HHHHHHH-HhhCCCCCCEEEEECCcHHHHHHHHHHHHCCCeEEEEcCChHHHHHH-HHhCCcEEeccCcc-----CCCcc
Confidence            9999999 67788999999999999999999999999999999999888777666 88999887766542     12479


Q ss_pred             cEEEEcCCCcccHHHHHhccccCCEEEEecCCCCCc-ccChHHHHhCCcEEEecccCCHHHHHHHHHHHHcCCCceeEEE
Q 018067          249 DGIIDTVSAVHPLMPLIGLLKSQGKLVLVGAPEKPL-ELPAFSLLMGRKIVGGSMIGGMKETQEMIDFAAKHNIRADIEV  327 (361)
Q Consensus       249 d~vid~~g~~~~~~~~~~~l~~~G~~v~~g~~~~~~-~~~~~~~~~~~~~i~g~~~~~~~~~~~~~~ll~~~~~~~~~~~  327 (361)
                      |+++++.+....+..++++++++|+++.+|...... .++... +.++..+.++.....+.++.++++++++.+++.++.
T Consensus       227 D~vi~~~~~~~~~~~~~~~l~~~G~~v~~g~~~~~~~~~~~~~-~~~~~~i~~~~~~~~~~~~~~~~l~~~~~l~~~~~~  305 (329)
T cd08298         227 DAAIIFAPVGALVPAALRAVKKGGRVVLAGIHMSDIPAFDYEL-LWGEKTIRSVANLTRQDGEEFLKLAAEIPIKPEVET  305 (329)
T ss_pred             cEEEEcCCcHHHHHHHHHHhhcCCEEEEEcCCCCCCCccchhh-hhCceEEEEecCCCHHHHHHHHHHHHcCCCCceEEE
Confidence            999998776666899999999999999988543221 233333 457778888887778889999999999998876789


Q ss_pred             EecccHHHHHHHHHcCCCceEEEE
Q 018067          328 IPADYVNTALERLAKADVRYRFVI  351 (361)
Q Consensus       328 ~~l~~~~~a~~~~~~~~~~gkvvi  351 (361)
                      |+++++++|++.+.+++..||+++
T Consensus       306 ~~~~~~~~a~~~~~~~~~~~~~v~  329 (329)
T cd08298         306 YPLEEANEALQDLKEGRIRGAAVL  329 (329)
T ss_pred             EeHHHHHHHHHHHHcCCCcceeeC
Confidence            999999999999999988899874

These alcohol dehydrogenases are related to the cinnamyl alcohol dehydrogenases (CAD), members of the medium chain dehydrogenase/reductase family. NAD(P)(H)-dependent oxidoreductases are the major enzymes in the interconversion of alcohols and aldehydes, or ketones. Cinnamyl alcohol dehydrogenases (CAD) reduce cinnamaldehydes to cinnamyl alcohols in the last step of monolignal metabolism in plant cells walls. CAD binds 2 zinc ions and is NADPH- dependent. CAD family members are also found in non-plant species, e.g. in yeast where they have an aldehyde reductase activity. The medium chain dehydrogenases/reductase (MDR)/zinc-dependent alcohol dehydrogenase-like family, which contains the zinc-dependent alcohol dehydrogenase (ADH-Zn) and related proteins, is a diverse group of proteins related to the first identified member, class I mammalian ADH. MDRs display a broad range of activities and are distinguished from the smaller short cha

>cd08254 hydroxyacyl_CoA_DH 6-hydroxycyclohex-1-ene-1-carboxyl-CoA dehydrogenase, N-benzyl-3-pyrrolidinol dehydrogenase, and other MDR family members

Probab=100.00  E-value=4.3e-41  Score=313.11  Aligned_cols=333  Identities=33%  Similarity=0.481  Sum_probs=286.1

Q ss_pred             cceeeeeecCCCCCccceeeccCCCCCCeEEEEEeeeccCcchHHhHhcCCC-CCCCCCcccccccEEEEEeCCCCCCCC
Q 018067           11 KNAFGWAAKDTSGVLSPFHFSRRATGEKDVTFKVTHCGICHSDLHMIKNEWG-NTIYPIVPGHEIVGVVTEVGSKVSKFK   89 (361)
Q Consensus        11 ~~~~~~~~~~~~~~l~~~~~~~p~~~~~evlV~v~~~~i~~~D~~~~~g~~~-~~~~p~~lG~e~~G~Vv~vG~~v~~~~   89 (361)
                      |+++.+..++++. +.+.+.+.|.+.+++|+|++.++++|+.|+..+.|..+ ...+|.++|+|++|+|+++|+++..|+
T Consensus         1 ~~~~~~~~~~~~~-~~~~~~~~~~~~~~~v~i~v~~~~~~~~d~~~~~g~~~~~~~~~~~~g~~~~G~v~~~G~~v~~~~   79 (338)
T cd08254           1 MKAWRFHKGSKGL-LVLEEVPVPEPGPGEVLVKVKAAGVCHSDLHILDGGVPTLTKLPLTLGHEIAGTVVEVGAGVTNFK   79 (338)
T ss_pred             CeeEEEecCCCCc-eEEeccCCCCCCCCeEEEEEEEEeeccHhHHHHcCCCcccCCCCEeccccccEEEEEECCCCccCC
Confidence            6777777766665 77788899999999999999999999999999888664 234577899999999999999999999


Q ss_pred             CCCEEEeccccCCCCCCcccccCCCCCCcchhcccccccCCCCcCCCcceeEEeecCCceEECCCCCCcccccccchhhh
Q 018067           90 VGDKVGVGCMVGSCRSCDSCAIDLENYCPKVIMTYANKYHDGTITYGGYSDIMVADEHFVVRIPEGTPLDATAPLLCAGI  169 (361)
Q Consensus        90 ~GdrV~~~~~~~~c~~c~~c~~~~~~~c~~~~~~~~~~~~~~~~~~g~~a~~v~v~~~~~~~ip~~~~~~~aa~l~~~~~  169 (361)
                      +||||+..+.. +||.|..|..+..+.|....+.       |....|+|++|+.++.+.++++|+++++.+++.++..+.
T Consensus        80 ~Gd~V~~~~~~-~~~~~~~~~~~~~~~~~~~~~~-------~~~~~g~~~~~~~~~~~~~~~lp~~~~~~~a~~~~~~~~  151 (338)
T cd08254          80 VGDRVAVPAVI-PCGACALCRRGRGNLCLNQGMP-------GLGIDGGFAEYIVVPARALVPVPDGVPFAQAAVATDAVL  151 (338)
T ss_pred             CCCEEEECCCC-CCCCChhhhCcCcccCCCCCcc-------ccccCCcceeeEEechHHeEECCCCCCHHHhhhhcchHH
Confidence            99999877754 9999999999999999654321       445679999999999999999999999999999999999


Q ss_pred             hhhhHhhhcCCCCCCCEEEEEcCChHHHHHHHHHHHcCCeEEEEeCCchhHHHHHHHcCCCEEecCCCHHHHH--Hhc--
Q 018067          170 TVYSPLRFYGLDKPGMHVGVVGLGGLGHVAVKFAKAMGVKVTVISTSPSKKSEAIERLGADSFLVSRDQDEMQ--AAM--  245 (361)
Q Consensus       170 ta~~~l~~~~~~~~g~~vlV~Gag~vG~~a~~la~~~g~~vi~~~~~~~~~~~~~~~~g~~~vv~~~~~~~~~--~~~--  245 (361)
                      +||+++.....++++++|||.|+|.+|++++++|+.+|++|+++++++++...+ +++|++.+++..+.....  ...  
T Consensus       152 ta~~~l~~~~~~~~~~~vli~g~g~vG~~~~~la~~~G~~V~~~~~s~~~~~~~-~~~g~~~~~~~~~~~~~~~~~~~~~  230 (338)
T cd08254         152 TPYHAVVRAGEVKPGETVLVIGLGGLGLNAVQIAKAMGAAVIAVDIKEEKLELA-KELGADEVLNSLDDSPKDKKAAGLG  230 (338)
T ss_pred             HHHHHHHhccCCCCCCEEEEECCcHHHHHHHHHHHHcCCEEEEEcCCHHHHHHH-HHhCCCEEEcCCCcCHHHHHHHhcC
Confidence            999999888888999999998889999999999999999999998888877666 789998888766532211  222  


Q ss_pred             CCccEEEEcCCCcccHHHHHhccccCCEEEEecCCCCCcccChHHHHhCCcEEEecccCCHHHHHHHHHHHHcCCCceeE
Q 018067          246 GTMDGIIDTVSAVHPLMPLIGLLKSQGKLVLVGAPEKPLELPAFSLLMGRKIVGGSMIGGMKETQEMIDFAAKHNIRADI  325 (361)
Q Consensus       246 ~g~d~vid~~g~~~~~~~~~~~l~~~G~~v~~g~~~~~~~~~~~~~~~~~~~i~g~~~~~~~~~~~~~~ll~~~~~~~~~  325 (361)
                      .++|+++|++|....+..++++++++|+++.+|.......++...++.++.++.+++....+.+..++++++++.+.+.+
T Consensus       231 ~~~D~vid~~g~~~~~~~~~~~l~~~G~~v~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ll~~~~l~~~~  310 (338)
T cd08254         231 GGFDVIFDFVGTQPTFEDAQKAVKPGGRIVVVGLGRDKLTVDLSDLIARELRIIGSFGGTPEDLPEVLDLIAKGKLDPQV  310 (338)
T ss_pred             CCceEEEECCCCHHHHHHHHHHhhcCCEEEEECCCCCCCccCHHHHhhCccEEEEeccCCHHHHHHHHHHHHcCCCcccc
Confidence            37999999998776689999999999999999876555556667778899999998887788899999999999988667


Q ss_pred             EEEecccHHHHHHHHHcCCCceEEEEEe
Q 018067          326 EVIPADYVNTALERLAKADVRYRFVIDV  353 (361)
Q Consensus       326 ~~~~l~~~~~a~~~~~~~~~~gkvvi~~  353 (361)
                      +.+++++++++++.+.+++..||+++++
T Consensus       311 ~~~~~~~~~~a~~~~~~~~~~~kvv~~~  338 (338)
T cd08254         311 ETRPLDEIPEVLERLHKGKVKGRVVLVP  338 (338)
T ss_pred             eeEcHHHHHHHHHHHHcCCccceEEEeC
Confidence            8999999999999999999889999874

This group contains enzymes of the zinc-dependent alcohol dehydrogenase family, including members (aka MDR) identified as 6-hydroxycyclohex-1-ene-1-carboxyl-CoA dehydrogenase and N-benzyl-3-pyrrolidinol dehydrogenase. 6-hydroxycyclohex-1-ene-1-carboxyl-CoA dehydrogenase catalyzes the conversion of 6-Hydroxycyclohex-1-enecarbonyl-CoA and NAD+ to 6-Ketoxycyclohex-1-ene-1-carboxyl-CoA,NADH, and H+. This group displays the characteristic catalytic and structural zinc sites of the zinc-dependent alcohol dehydrogenases. NAD(P)(H)-dependent oxidoreductases are the major enzymes in the interconversion of alcohols and aldehydes, or ketones. Alcohol dehydrogenase in the liver converts ethanol and NAD+ to acetaldehyde and NADH, while in yeast and some other microorganisms ADH catalyzes the conversion acetaldehyde to ethanol in alcoholic fermentatio

>cd08282 PFDH_like Pseudomonas putida aldehyde-dismutating formaldehyde dehydrogenase (PFDH)

Probab=100.00  E-value=8.4e-41  Score=315.47  Aligned_cols=333  Identities=25%  Similarity=0.273  Sum_probs=269.0

Q ss_pred             cceeeeeecCCCCCccceeeccCCC-CCCeEEEEEeeeccCcchHHhHhcCCCCCCCCCcccccccEEEEEeCCCCCCCC
Q 018067           11 KNAFGWAAKDTSGVLSPFHFSRRAT-GEKDVTFKVTHCGICHSDLHMIKNEWGNTIYPIVPGHEIVGVVTEVGSKVSKFK   89 (361)
Q Consensus        11 ~~~~~~~~~~~~~~l~~~~~~~p~~-~~~evlV~v~~~~i~~~D~~~~~g~~~~~~~p~~lG~e~~G~Vv~vG~~v~~~~   89 (361)
                      |+++.+   ++|+.++++++|.|.+ +++|++||++++++|++|++.+.|..+ ..+|.++|||++|+|+++|+++..|+
T Consensus         1 m~~~~~---~~~~~~~~~~~~~p~~~~~~evlv~v~a~~i~~~D~~~~~g~~~-~~~p~~~g~e~~G~V~~vG~~v~~~~   76 (375)
T cd08282           1 MKAVVY---GGPGNVAVEDVPDPKIEHPTDAIVRITTTAICGSDLHMYRGRTG-AEPGLVLGHEAMGEVEEVGSAVESLK   76 (375)
T ss_pred             CceEEE---ecCCceeEEeCCCCCCCCCCeEEEEEEEEeeCHHHHHHHcCCCC-CCCCceeccccEEEEEEeCCCCCcCC
Confidence            455554   4567899999999996 799999999999999999999988765 34688999999999999999999999


Q ss_pred             CCCEEEeccccCCCCCCcccccCCCCCCcchhccccccc---CCCCcCCCcceeEEeecCC--ceEECCCCCCcc---cc
Q 018067           90 VGDKVGVGCMVGSCRSCDSCAIDLENYCPKVIMTYANKY---HDGTITYGGYSDIMVADEH--FVVRIPEGTPLD---AT  161 (361)
Q Consensus        90 ~GdrV~~~~~~~~c~~c~~c~~~~~~~c~~~~~~~~~~~---~~~~~~~g~~a~~v~v~~~--~~~~ip~~~~~~---~a  161 (361)
                      +||||+..+ ..+|+.|.+|.++..++|.+....+.+.+   .......|+|++|+.++.+  .++++|++++++   ++
T Consensus        77 ~Gd~V~~~~-~~~~g~~~~c~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~a~y~~v~~~~~~~~~lP~~~~~~~~~~~  155 (375)
T cd08282          77 VGDRVVVPF-NVACGRCRNCKRGLTGVCLTVNPGRAGGAYGYVDMGPYGGGQAEYLRVPYADFNLLKLPDRDGAKEKDDY  155 (375)
T ss_pred             CCCEEEEeC-CCCCCCCHHHHCcCcccCCCCCcccccccccccccCCCCCeeeeEEEeecccCcEEECCCCCChhhhhhe
Confidence            999997654 45899999999999999987533221111   1112246999999999975  899999999998   56


Q ss_pred             cccchhhhhhhhHhhhcCCCCCCCEEEEEcCChHHHHHHHHHHHcCC-eEEEEeCCchhHHHHHHHcCCCEEecCCCHHH
Q 018067          162 APLLCAGITVYSPLRFYGLDKPGMHVGVVGLGGLGHVAVKFAKAMGV-KVTVISTSPSKKSEAIERLGADSFLVSRDQDE  240 (361)
Q Consensus       162 a~l~~~~~ta~~~l~~~~~~~~g~~vlV~Gag~vG~~a~~la~~~g~-~vi~~~~~~~~~~~~~~~~g~~~vv~~~~~~~  240 (361)
                      +.+.+.+.+||+++ ....+++|++|+|.|+|.+|++++|+|++.|+ +|+++++++++. ++++++|+. .+++++.+.
T Consensus       156 a~~~~~~~ta~~a~-~~~~~~~g~~vlI~g~g~vg~~~~~~a~~~G~~~vi~~~~~~~~~-~~~~~~g~~-~v~~~~~~~  232 (375)
T cd08282         156 LMLSDIFPTGWHGL-ELAGVQPGDTVAVFGAGPVGLMAAYSAILRGASRVYVVDHVPERL-DLAESIGAI-PIDFSDGDP  232 (375)
T ss_pred             eeecchHHHHHHHH-HhcCCCCCCEEEEECCCHHHHHHHHHHHHcCCCEEEEECCCHHHH-HHHHHcCCe-EeccCcccH
Confidence            78888899999998 56678999999999889999999999999998 788876666554 555789984 456655433


Q ss_pred             ---HHHhc-CCccEEEEcCCCcc-----------cHHHHHhccccCCEEEEecCCCC-------------CcccChHHHH
Q 018067          241 ---MQAAM-GTMDGIIDTVSAVH-----------PLMPLIGLLKSQGKLVLVGAPEK-------------PLELPAFSLL  292 (361)
Q Consensus       241 ---~~~~~-~g~d~vid~~g~~~-----------~~~~~~~~l~~~G~~v~~g~~~~-------------~~~~~~~~~~  292 (361)
                         +..++ +++|++|||+|+..           ++..++++++++|+++.+|....             ...++...++
T Consensus       233 ~~~i~~~~~~~~d~v~d~~g~~~~~~~~~~~~~~~~~~~~~~l~~~g~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~  312 (375)
T cd08282         233 VEQILGLEPGGVDRAVDCVGYEARDRGGEAQPNLVLNQLIRVTRPGGGIGIVGVYVAEDPGAGDAAAKQGELSFDFGLLW  312 (375)
T ss_pred             HHHHHHhhCCCCCEEEECCCCcccccccccchHHHHHHHHHHhhcCcEEEEEeccCCcccccccccccCccccccHHHHH
Confidence               33333 37999999999863           37899999999999998876431             1234556677


Q ss_pred             hCCcEEEecccCCHHHHHHHHHHHHcCCCce---eEEEEecccHHHHHHHHHcCCCceEEEEE
Q 018067          293 MGRKIVGGSMIGGMKETQEMIDFAAKHNIRA---DIEVIPADYVNTALERLAKADVRYRFVID  352 (361)
Q Consensus       293 ~~~~~i~g~~~~~~~~~~~~~~ll~~~~~~~---~~~~~~l~~~~~a~~~~~~~~~~gkvvi~  352 (361)
                      .++.++.++.....+.++.+++++.++++++   ..++++++++++|++.+.+++ .+|+|+.
T Consensus       313 ~~~~~~~~~~~~~~~~~~~~~~l~~~~~l~~~~~~~~~~~l~~~~~a~~~~~~~~-~~kvvv~  374 (375)
T cd08282         313 AKGLSFGTGQAPVKKYNRQLRDLILAGRAKPSFVVSHVISLEDAPEAYARFDKRL-ETKVVIK  374 (375)
T ss_pred             hcCcEEEEecCCchhhHHHHHHHHHcCCCChHHcEEEEeeHHHHHHHHHHHhcCC-ceEEEeC
Confidence            7888888887767778999999999999986   349999999999999999998 8999975

Formaldehyde dehydrogenase (FDH) is a member of the zinc-dependent/medium chain alcohol dehydrogenase family. Unlike typical FDH, Pseudomonas putida aldehyde-dismutating FDH (PFDH) is glutathione-independent. PFDH converts 2 molecules of aldehydes to corresponding carboxylic acid and alcohol. MDH family uses NAD(H) as a cofactor in the interconversion of alcohols and aldehydes, or ketones. Like the zinc-dependent alcohol dehydrogenases (ADH) of the medium chain alcohol dehydrogenase/reductase family (MDR), these tetrameric FDHs have a catalytic zinc that resides between the catalytic and NAD(H)binding domains and a structural zinc in a lobe of the catalytic domain. Unlike ADH, where NAD(P)(H) acts as a cofactor, NADH in FDH is a tightly bound redox cofactor (similar to nicotinamide proteins). The medium chain alcohol dehydrogenase family (MDR) has a NAD(P)(H)-binding domain in a Rossmann fo

>cd08259 Zn_ADH5 Alcohol dehydrogenases of the MDR family

Probab=100.00  E-value=1.5e-40  Score=308.58  Aligned_cols=328  Identities=28%  Similarity=0.424  Sum_probs=275.0

Q ss_pred             cceeeeeecCCCCCccceeeccCCCCCCeEEEEEeeeccCcchHHhHhcCCCCCCCCCcccccccEEEEEeCCCCCCCCC
Q 018067           11 KNAFGWAAKDTSGVLSPFHFSRRATGEKDVTFKVTHCGICHSDLHMIKNEWGNTIYPIVPGHEIVGVVTEVGSKVSKFKV   90 (361)
Q Consensus        11 ~~~~~~~~~~~~~~l~~~~~~~p~~~~~evlV~v~~~~i~~~D~~~~~g~~~~~~~p~~lG~e~~G~Vv~vG~~v~~~~~   90 (361)
                      |+++.+..  .++.+.+.++|.|.+.+++|+|+++++++|+.|++...|..+....|.++|||++|+|+++|++++.|++
T Consensus         1 m~a~~~~~--~~~~~~~~~~~~p~~~~~~v~v~v~~~~i~~~d~~~~~g~~~~~~~~~~~g~e~~G~v~~~G~~v~~~~~   78 (332)
T cd08259           1 MKAAILHK--PNKPLQIEEVPDPEPGPGEVLIKVKAAGVCYRDLLFWKGFFPRGKYPLILGHEIVGTVEEVGEGVERFKP   78 (332)
T ss_pred             CeEEEEec--CCCceEEEEccCCCCCCCeEEEEEEEEecchhhhHHhcCCCCCCCCCeeccccceEEEEEECCCCccCCC
Confidence            45555543  3567888899999999999999999999999999998886655566789999999999999999999999


Q ss_pred             CCEEEeccccCCCCCCcccccCCCCCCcchhcccccccCCCCcCCCcceeEEeecCCceEECCCCCCcccccccchhhhh
Q 018067           91 GDKVGVGCMVGSCRSCDSCAIDLENYCPKVIMTYANKYHDGTITYGGYSDIMVADEHFVVRIPEGTPLDATAPLLCAGIT  170 (361)
Q Consensus        91 GdrV~~~~~~~~c~~c~~c~~~~~~~c~~~~~~~~~~~~~~~~~~g~~a~~v~v~~~~~~~ip~~~~~~~aa~l~~~~~t  170 (361)
                      ||+|+...+. .|++|.+|..+.+++|.+...       .+....|+|++|+.++.+.++++|+++++++++.+++.+.+
T Consensus        79 Gd~V~~~~~~-~~~~~~~~~~~~~~~~~~~~~-------~~~~~~g~~~~~~~v~~~~~~~ip~~~~~~~~~~~~~~~~t  150 (332)
T cd08259          79 GDRVILYYYI-PCGKCEYCLSGEENLCRNRAE-------YGEEVDGGFAEYVKVPERSLVKLPDNVSDESAALAACVVGT  150 (332)
T ss_pred             CCEEEECCCC-CCcCChhhhCCCcccCCCccc-------cccccCCeeeeEEEechhheEECCCCCCHHHHhhhccHHHH
Confidence            9999876555 799999999999999987521       13345799999999999999999999999999999999999


Q ss_pred             hhhHhhhcCCCCCCCEEEEEcC-ChHHHHHHHHHHHcCCeEEEEeCCchhHHHHHHHcCCCEEecCCC-HHHHHHhcCCc
Q 018067          171 VYSPLRFYGLDKPGMHVGVVGL-GGLGHVAVKFAKAMGVKVTVISTSPSKKSEAIERLGADSFLVSRD-QDEMQAAMGTM  248 (361)
Q Consensus       171 a~~~l~~~~~~~~g~~vlV~Ga-g~vG~~a~~la~~~g~~vi~~~~~~~~~~~~~~~~g~~~vv~~~~-~~~~~~~~~g~  248 (361)
                      ||++++. ..+.+++++||+|+ |.+|++++++++..|++|+.+++++++...+ ++++.+.+++..+ .+.+... .++
T Consensus       151 a~~~l~~-~~~~~~~~vlI~ga~g~vG~~~~~~a~~~g~~v~~~~~~~~~~~~~-~~~~~~~~~~~~~~~~~~~~~-~~~  227 (332)
T cd08259         151 AVHALKR-AGVKKGDTVLVTGAGGGVGIHAIQLAKALGARVIAVTRSPEKLKIL-KELGADYVIDGSKFSEDVKKL-GGA  227 (332)
T ss_pred             HHHHHHH-hCCCCCCEEEEECCCCHHHHHHHHHHHHcCCeEEEEeCCHHHHHHH-HHcCCcEEEecHHHHHHHHhc-cCC
Confidence            9999987 77899999999997 9999999999999999999999887776555 7788877776543 1222222 279


Q ss_pred             cEEEEcCCCcccHHHHHhccccCCEEEEecCCCCCc-ccChHHHHhCCcEEEecccCCHHHHHHHHHHHHcCCCceeE-E
Q 018067          249 DGIIDTVSAVHPLMPLIGLLKSQGKLVLVGAPEKPL-ELPAFSLLMGRKIVGGSMIGGMKETQEMIDFAAKHNIRADI-E  326 (361)
Q Consensus       249 d~vid~~g~~~~~~~~~~~l~~~G~~v~~g~~~~~~-~~~~~~~~~~~~~i~g~~~~~~~~~~~~~~ll~~~~~~~~~-~  326 (361)
                      |++|+++|... ...++++++++|+++.+|...... .+.......++.++.++.....++++++++++.++.+++.+ +
T Consensus       228 d~v~~~~g~~~-~~~~~~~~~~~g~~v~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~  306 (332)
T cd08259         228 DVVIELVGSPT-IEESLRSLNKGGRLVLIGNVTPDPAPLRPGLLILKEIRIIGSISATKADVEEALKLVKEGKIKPVIDR  306 (332)
T ss_pred             CEEEECCChHH-HHHHHHHhhcCCEEEEEcCCCCCCcCCCHHHHHhCCcEEEEecCCCHHHHHHHHHHHHcCCCccceeE
Confidence            99999999877 889999999999999998754332 22434444678888888766778899999999999988666 8


Q ss_pred             EEecccHHHHHHHHHcCCCceEEEEE
Q 018067          327 VIPADYVNTALERLAKADVRYRFVID  352 (361)
Q Consensus       327 ~~~l~~~~~a~~~~~~~~~~gkvvi~  352 (361)
                      .++++++++||+.+.+++..||++++
T Consensus       307 ~~~~~~~~~a~~~~~~~~~~~kvv~~  332 (332)
T cd08259         307 VVSLEDINEALEDLKSGKVVGRIVLK  332 (332)
T ss_pred             EEcHHHHHHHHHHHHcCCcccEEEeC
Confidence            99999999999999999888998864

NAD(P)(H)-dependent oxidoreductases are the major enzymes in the interconversion of alcohols and aldehydes, or ketones. This group contains proteins that share the characteristic catalytic and structural zinc-binding sites of the zinc-dependent alcohol dehydrogenase family. Alcohol dehydrogenase in the liver converts ethanol and NAD+ to acetaldehyde and NADH, while in yeast and some other microorganisms ADH catalyzes the conversion acetaldehyde to ethanol in alcoholic fermentation. ADH is a member of the medium chain alcohol dehydrogenase family (MDR), which have a NAD(P)(H)-binding domain in a Rossmann fold of a beta-alpha form. The NAD(H)-binding region is comprised of 2 structurally similar halves, each of which contacts a mononucleotide. A GxGxxG motif after the first mononucleotide contact half allows the close contact of the coenzyme with the ADH backbone. The N-terminal catalytic domain has a distant homology to GroES.

>cd08279 Zn_ADH_class_III Class III alcohol dehydrogenase

Probab=100.00  E-value=2.4e-40  Score=311.13  Aligned_cols=335  Identities=24%  Similarity=0.388  Sum_probs=272.7

Q ss_pred             cceeeeeecCCCCCccceeeccCCCCCCeEEEEEeeeccCcchHHhHhcCCCCCCCCCcccccccEEEEEeCCCCCCCCC
Q 018067           11 KNAFGWAAKDTSGVLSPFHFSRRATGEKDVTFKVTHCGICHSDLHMIKNEWGNTIYPIVPGHEIVGVVTEVGSKVSKFKV   90 (361)
Q Consensus        11 ~~~~~~~~~~~~~~l~~~~~~~p~~~~~evlV~v~~~~i~~~D~~~~~g~~~~~~~p~~lG~e~~G~Vv~vG~~v~~~~~   90 (361)
                      |+++.+...+  +.+++++++.|++++++|+|++.++++|+.|+..+.|..+ ..+|.++|+|++|+|+++|+++..|++
T Consensus         1 m~a~~~~~~~--~~~~~~~~~~p~~~~~~v~i~v~~~~i~~~d~~~~~g~~~-~~~~~~~g~e~~G~V~~vG~~v~~~~~   77 (363)
T cd08279           1 MRAAVLHEVG--KPLEIEEVELDDPGPGEVLVRIAAAGLCHSDLHVVTGDLP-APLPAVLGHEGAGVVEEVGPGVTGVKP   77 (363)
T ss_pred             CeEEEEecCC--CCceEEEeeCCCCCCCeEEEEEEEeecCcHHHHHhcCCCC-CCCCccccccceEEEEEeCCCccccCC
Confidence            5667775543  4578889999999999999999999999999999888665 356779999999999999999999999


Q ss_pred             CCEEEeccccCCCCCCcccccCCCCCCcchhcccc-------------cccCCCCcCCCcceeEEeecCCceEECCCCCC
Q 018067           91 GDKVGVGCMVGSCRSCDSCAIDLENYCPKVIMTYA-------------NKYHDGTITYGGYSDIMVADEHFVVRIPEGTP  157 (361)
Q Consensus        91 GdrV~~~~~~~~c~~c~~c~~~~~~~c~~~~~~~~-------------~~~~~~~~~~g~~a~~v~v~~~~~~~ip~~~~  157 (361)
                      ||+|+..+ .++|++|.+|.++..+.|.+......             +.-.......|+|++|+.++.+.++++|++++
T Consensus        78 Gd~V~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~lp~~~~  156 (363)
T cd08279          78 GDHVVLSW-IPACGTCRYCSRGQPNLCDLGAGILGGQLPDGTRRFTADGEPVGAMCGLGTFAEYTVVPEASVVKIDDDIP  156 (363)
T ss_pred             CCEEEECC-CCCCCCChhhcCCCcccCcccccccccccCCCcccccccCccccccccCccceeeEEeccccEEECCCCCC
Confidence            99997664 45999999999999999986521100             00000113469999999999999999999999


Q ss_pred             cccccccchhhhhhhhHhhhcCCCCCCCEEEEEcCChHHHHHHHHHHHcCCe-EEEEeCCchhHHHHHHHcCCCEEecCC
Q 018067          158 LDATAPLLCAGITVYSPLRFYGLDKPGMHVGVVGLGGLGHVAVKFAKAMGVK-VTVISTSPSKKSEAIERLGADSFLVSR  236 (361)
Q Consensus       158 ~~~aa~l~~~~~ta~~~l~~~~~~~~g~~vlV~Gag~vG~~a~~la~~~g~~-vi~~~~~~~~~~~~~~~~g~~~vv~~~  236 (361)
                      +++++.+++.+.+||.++.....+++|++|||+|+|.+|++++++|+.+|++ |+.+++++++...+ +++|++++++.+
T Consensus       157 ~~~aa~~~~~~~ta~~~~~~~~~~~~g~~vLI~g~g~vG~a~i~lak~~G~~~Vi~~~~~~~~~~~~-~~~g~~~vv~~~  235 (363)
T cd08279         157 LDRAALLGCGVTTGVGAVVNTARVRPGDTVAVIGCGGVGLNAIQGARIAGASRIIAVDPVPEKLELA-RRFGATHTVNAS  235 (363)
T ss_pred             hHHeehhcchhHHHHHHHHhccCCCCCCEEEEECCCHHHHHHHHHHHHcCCCcEEEEcCCHHHHHHH-HHhCCeEEeCCC
Confidence            9999999999999999988878889999999998899999999999999996 88887777776544 789999888877


Q ss_pred             CHH---HHHHhc--CCccEEEEcCCCcccHHHHHhccccCCEEEEecCCC--CCcccChHHHHhCCcEEEeccc---CCH
Q 018067          237 DQD---EMQAAM--GTMDGIIDTVSAVHPLMPLIGLLKSQGKLVLVGAPE--KPLELPAFSLLMGRKIVGGSMI---GGM  306 (361)
Q Consensus       237 ~~~---~~~~~~--~g~d~vid~~g~~~~~~~~~~~l~~~G~~v~~g~~~--~~~~~~~~~~~~~~~~i~g~~~---~~~  306 (361)
                      ..+   .+..+.  .++|++||+++....+..++++++++|+++.+|..+  ....++...+..++..+.++..   ...
T Consensus       236 ~~~~~~~l~~~~~~~~vd~vld~~~~~~~~~~~~~~l~~~G~~v~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  315 (363)
T cd08279         236 EDDAVEAVRDLTDGRGADYAFEAVGRAATIRQALAMTRKGGTAVVVGMGPPGETVSLPALELFLSEKRLQGSLYGSANPR  315 (363)
T ss_pred             CccHHHHHHHHcCCCCCCEEEEcCCChHHHHHHHHHhhcCCeEEEEecCCCCcccccCHHHHhhcCcEEEEEEecCcCcH
Confidence            643   333443  369999999997655889999999999999998654  2345666666667777777643   335


Q ss_pred             HHHHHHHHHHHcCCCcee--E-EEEecccHHHHHHHHHcCCCceEEE
Q 018067          307 KETQEMIDFAAKHNIRAD--I-EVIPADYVNTALERLAKADVRYRFV  350 (361)
Q Consensus       307 ~~~~~~~~ll~~~~~~~~--~-~~~~l~~~~~a~~~~~~~~~~gkvv  350 (361)
                      +.++++++++.++++++.  + ++|+++++++|++.+.+++..+.++
T Consensus       316 ~~~~~~~~l~~~g~l~~~~~~~~~~~~~~~~~a~~~~~~~~~~~~~~  362 (363)
T cd08279         316 RDIPRLLDLYRAGRLKLDELVTRRYSLDEINEAFADMLAGENARGVI  362 (363)
T ss_pred             HHHHHHHHHHHcCCCCcceeEEEEEcHHHHHHHHHHHhcCCceeEEe
Confidence            788999999999998852  3 7899999999999999888755444

Glutathione-dependent formaldehyde dehydrogenases (FDHs, Class III ADH) are members of the zinc-dependent/medium chain alcohol dehydrogenase family. FDH converts formaldehyde and NAD(P) to formate and NAD(P)H. The initial step in this process the spontaneous formation of a S-(hydroxymethyl)glutathione adduct from formaldehyde and glutathione, followed by FDH-mediated oxidation (and detoxification) of the adduct to S-formylglutathione. NAD(P)(H)-dependent oxidoreductases are the major enzymes in the interconversion of alcohols and aldehydes or ketones. Alcohol dehydrogenase in the liver converts ethanol and NAD+ to acetaldehyde and NADH, while in yeast and some other microorganisms ADH catalyzes the conversion acetaldehyde to ethanol in alcoholic fermentation. Class III ADH are also known as glutathione-dependent formaldehyde dehydrogenase (FDH), which convert aldehydes to corresponding carboxylic acid and alcohol. ADH is a me

>cd08286 FDH_like_ADH2 formaldehyde dehydrogenase (FDH)-like

Probab=100.00  E-value=2.5e-40  Score=309.12  Aligned_cols=331  Identities=24%  Similarity=0.350  Sum_probs=271.9

Q ss_pred             cceeeeeecCCCCCccceeeccCCC-CCCeEEEEEeeeccCcchHHhHhcCCCCCCCCCcccccccEEEEEeCCCCCCCC
Q 018067           11 KNAFGWAAKDTSGVLSPFHFSRRAT-GEKDVTFKVTHCGICHSDLHMIKNEWGNTIYPIVPGHEIVGVVTEVGSKVSKFK   89 (361)
Q Consensus        11 ~~~~~~~~~~~~~~l~~~~~~~p~~-~~~evlV~v~~~~i~~~D~~~~~g~~~~~~~p~~lG~e~~G~Vv~vG~~v~~~~   89 (361)
                      |+++.+.   .++.+++++++.|++ .++||+||++++++|++|++.+.|.++...+|.++|||++|+|+++|+++..++
T Consensus         1 m~a~~~~---~~~~~~~~~~~~p~~~~~~ev~v~v~a~~i~~~d~~~~~g~~~~~~~~~~~g~e~~G~V~~~G~~v~~~~   77 (345)
T cd08286           1 MKALVYH---GPGKISWEDRPKPTIQEPTDAIVKMLKTTICGTDLHILKGDVPTVTPGRILGHEGVGVVEEVGSAVTNFK   77 (345)
T ss_pred             CceEEEe---cCCceeEEecCCCCCCCCCeEEEEEEEeeecchhhHHHcCCCCCCCCCceecccceEEEEEeccCccccC
Confidence            4556553   345688899999986 899999999999999999999988766556688999999999999999999999


Q ss_pred             CCCEEEeccccCCCCCCcccccCCCCCCcchhcccccccCCCCcCCCcceeEEeecCC--ceEECCCCCCcccccccchh
Q 018067           90 VGDKVGVGCMVGSCRSCDSCAIDLENYCPKVIMTYANKYHDGTITYGGYSDIMVADEH--FVVRIPEGTPLDATAPLLCA  167 (361)
Q Consensus        90 ~GdrV~~~~~~~~c~~c~~c~~~~~~~c~~~~~~~~~~~~~~~~~~g~~a~~v~v~~~--~~~~ip~~~~~~~aa~l~~~  167 (361)
                      +||+|++.+.. .|++|++|..+.++.|....+.     . +....|+|++|+.++.+  .++++|+++++.+++.+++.
T Consensus        78 ~Gd~V~~~~~~-~~~~~~~~~~~~~~~~~~~~~~-----~-~~~~~g~~~~~~~v~~~~~~~~~lp~~~~~~~aa~l~~~  150 (345)
T cd08286          78 VGDRVLISCIS-SCGTCGYCRKGLYSHCESGGWI-----L-GNLIDGTQAEYVRIPHADNSLYKLPEGVDEEAAVMLSDI  150 (345)
T ss_pred             CCCEEEECCcC-CCCCChHHHCcCcccCCCcccc-----c-ccccCCeeeeEEEcccccCceEECCCCCCHHHhhhccch
Confidence            99999776554 8999999999999999875331     1 23456999999999987  89999999999999999999


Q ss_pred             hhhhhhHhhhcCCCCCCCEEEEEcCChHHHHHHHHHHHcC-CeEEEEeCCchhHHHHHHHcCCCEEecCCCHHH---HHH
Q 018067          168 GITVYSPLRFYGLDKPGMHVGVVGLGGLGHVAVKFAKAMG-VKVTVISTSPSKKSEAIERLGADSFLVSRDQDE---MQA  243 (361)
Q Consensus       168 ~~ta~~~l~~~~~~~~g~~vlV~Gag~vG~~a~~la~~~g-~~vi~~~~~~~~~~~~~~~~g~~~vv~~~~~~~---~~~  243 (361)
                      +.+||.++.....+.+|++|||.|+|.+|++++|+|+.+| .+++++++++++ ..+.+++|++.+++++..+.   +..
T Consensus       151 ~~ta~~~~~~~~~~~~g~~vlI~g~g~~g~~~~~~a~~~G~~~v~~~~~~~~~-~~~~~~~g~~~~v~~~~~~~~~~i~~  229 (345)
T cd08286         151 LPTGYECGVLNGKVKPGDTVAIVGAGPVGLAALLTAQLYSPSKIIMVDLDDNR-LEVAKKLGATHTVNSAKGDAIEQVLE  229 (345)
T ss_pred             hHHHHHHHHhhcCCCCCCEEEEECCCHHHHHHHHHHHHcCCCeEEEEcCCHHH-HHHHHHhCCCceeccccccHHHHHHH
Confidence            9999988777777899999999989999999999999999 688886666655 45557899998888775433   233


Q ss_pred             hcC--CccEEEEcCCCcccHHHHHhccccCCEEEEecCCCCCcccChHHHHhCCcEEEecccCCHHHHHHHHHHHHcCCC
Q 018067          244 AMG--TMDGIIDTVSAVHPLMPLIGLLKSQGKLVLVGAPEKPLELPAFSLLMGRKIVGGSMIGGMKETQEMIDFAAKHNI  321 (361)
Q Consensus       244 ~~~--g~d~vid~~g~~~~~~~~~~~l~~~G~~v~~g~~~~~~~~~~~~~~~~~~~i~g~~~~~~~~~~~~~~ll~~~~~  321 (361)
                      +..  ++|++||++|....+..+++.++++|+++.+|.......++...++.+++++.+.... .+.+++++++++++.+
T Consensus       230 ~~~~~~~d~vld~~g~~~~~~~~~~~l~~~g~~v~~g~~~~~~~~~~~~~~~~~~~~~~~~~~-~~~~~~~~~~~~~~~l  308 (345)
T cd08286         230 LTDGRGVDVVIEAVGIPATFELCQELVAPGGHIANVGVHGKPVDLHLEKLWIKNITITTGLVD-TNTTPMLLKLVSSGKL  308 (345)
T ss_pred             HhCCCCCCEEEECCCCHHHHHHHHHhccCCcEEEEecccCCCCCcCHHHHhhcCcEEEeecCc-hhhHHHHHHHHHcCCC
Confidence            332  6999999999766688899999999999999975544556666667789999875442 3568889999999988


Q ss_pred             cee---EEEEecccHHHHHHHHHcCC--CceEEEEEe
Q 018067          322 RAD---IEVIPADYVNTALERLAKAD--VRYRFVIDV  353 (361)
Q Consensus       322 ~~~---~~~~~l~~~~~a~~~~~~~~--~~gkvvi~~  353 (361)
                      ++.   .+++++++++++++.+.+..  ...|++|++
T Consensus       309 ~~~~~~~~~~~l~~~~~a~~~~~~~~~~~~~k~~~~~  345 (345)
T cd08286         309 DPSKLVTHRFKLSEIEKAYDTFSAAAKHKALKVIIDF  345 (345)
T ss_pred             ChHHcEEeEeeHHHHHHHHHHHhccCCCCeeEEEEeC
Confidence            752   38999999999999998764  235988864

This group is related to formaldehyde dehydrogenase (FDH), which is a member of the zinc-dependent/medium chain alcohol dehydrogenase family. This family uses NAD(H) as a cofactor in the interconversion of alcohols and aldehydes, or ketones. Another member is identified as a dihydroxyacetone reductase. Like the zinc-dependent alcohol dehydrogenases (ADH) of the medium chain alcohol dehydrogenase/reductase family (MDR), tetrameric FDHs have a catalytic zinc that resides between the catalytic and NAD(H)binding domains and a structural zinc in a lobe of the catalytic domain. Unlike ADH, where NAD(P)(H) acts as a cofactor, NADH in FDH is a tightly bound redox cofactor (similar to nicotinamide proteins). The medium chain alcohol dehydrogenase family (MDR) has a NAD(P)(H)-binding domain in a Rossmann fold of a beta-alpha form. The N-terminal region typically has an all-beta catalytic domain. These proteins typically form dimers (

>cd08263 Zn_ADH10 Alcohol dehydrogenases of the MDR family

Probab=100.00  E-value=2.1e-40  Score=312.04  Aligned_cols=337  Identities=26%  Similarity=0.440  Sum_probs=275.5

Q ss_pred             cceeeeeecCCCCCccceeeccCCCCCCeEEEEEeeeccCcchHHhHhcCCCCCCCCCcccccccEEEEEeCCCCCC---
Q 018067           11 KNAFGWAAKDTSGVLSPFHFSRRATGEKDVTFKVTHCGICHSDLHMIKNEWGNTIYPIVPGHEIVGVVTEVGSKVSK---   87 (361)
Q Consensus        11 ~~~~~~~~~~~~~~l~~~~~~~p~~~~~evlV~v~~~~i~~~D~~~~~g~~~~~~~p~~lG~e~~G~Vv~vG~~v~~---   87 (361)
                      |+++.+...+  ..+++++.+.|.++++||+||+.++++|++|+....+.++. .+|.++|||++|+|+++|+++.+   
T Consensus         1 ~~a~~~~~~~--~~~~~~~~~~~~~~~~~v~v~v~~~~l~~~d~~~~~~~~~~-~~p~~~g~e~~G~v~~vG~~~~~~~~   77 (367)
T cd08263           1 MKAAVLKGPN--PPLTIEEIPVPRPKEGEILIRVAACGVCHSDLHVLKGELPF-PPPFVLGHEISGEVVEVGPNVENPYG   77 (367)
T ss_pred             CeeEEEecCC--CCcEEEEeeCCCCCCCeEEEEEEEeeeCcchHHHhcCCCCC-CCCcccccccceEEEEeCCCCCCCCc
Confidence            5666665432  45778889999999999999999999999999988886653 66789999999999999999988   


Q ss_pred             CCCCCEEEeccccCCCCCCcccccCCCCCCcchhcc-ccc--cc-----C-------CCCcCCCcceeEEeecCCceEEC
Q 018067           88 FKVGDKVGVGCMVGSCRSCDSCAIDLENYCPKVIMT-YAN--KY-----H-------DGTITYGGYSDIMVADEHFVVRI  152 (361)
Q Consensus        88 ~~~GdrV~~~~~~~~c~~c~~c~~~~~~~c~~~~~~-~~~--~~-----~-------~~~~~~g~~a~~v~v~~~~~~~i  152 (361)
                      |++||+|+..+ +.+||.|.+|..+.+++|++..+. ..+  .+     .       ......|+|++|+.++.+.++++
T Consensus        78 ~~~Gd~V~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~  156 (367)
T cd08263          78 LSVGDRVVGSF-IMPCGKCRYCARGKENLCEDFFAYNRLKGTLYDGTTRLFRLDGGPVYMYSMGGLAEYAVVPATALAPL  156 (367)
T ss_pred             CCCCCEEEEcC-CCCCCCChHHhCcCcccCcCccccccccccccCCcccccccCCCccccccCCcceeEEEechhhEEEC
Confidence            99999997644 449999999999999999975310 000  00     0       00124689999999999999999


Q ss_pred             CCCCCcccccccchhhhhhhhHhhhcCCCCCCCEEEEEcCChHHHHHHHHHHHcCCe-EEEEeCCchhHHHHHHHcCCCE
Q 018067          153 PEGTPLDATAPLLCAGITVYSPLRFYGLDKPGMHVGVVGLGGLGHVAVKFAKAMGVK-VTVISTSPSKKSEAIERLGADS  231 (361)
Q Consensus       153 p~~~~~~~aa~l~~~~~ta~~~l~~~~~~~~g~~vlV~Gag~vG~~a~~la~~~g~~-vi~~~~~~~~~~~~~~~~g~~~  231 (361)
                      |+++++.+++.+++.+.|||+++.....+.++++|||+|+|.+|++++++|+.+|++ +++++.++++...+ +++|++.
T Consensus       157 P~~is~~~aa~l~~~~~tA~~~l~~~~~~~~g~~VlI~g~g~vG~~~~~lak~~G~~~vi~~~~s~~~~~~~-~~~g~~~  235 (367)
T cd08263         157 PESLDYTESAVLGCAGFTAYGALKHAADVRPGETVAVIGVGGVGSSAIQLAKAFGASPIIAVDVRDEKLAKA-KELGATH  235 (367)
T ss_pred             CCCCCHHHHhHhcchHHHHHHHHHhcccCCCCCEEEEECCcHHHHHHHHHHHHcCCCeEEEEeCCHHHHHHH-HHhCCce
Confidence            999999999999999999999998888889999999998899999999999999997 87777777766555 7899999


Q ss_pred             EecCCCHHH---HHHhc--CCccEEEEcCCCcccHHHHHhccccCCEEEEecCCCC--CcccChHHHHhCCcEEEecccC
Q 018067          232 FLVSRDQDE---MQAAM--GTMDGIIDTVSAVHPLMPLIGLLKSQGKLVLVGAPEK--PLELPAFSLLMGRKIVGGSMIG  304 (361)
Q Consensus       232 vv~~~~~~~---~~~~~--~g~d~vid~~g~~~~~~~~~~~l~~~G~~v~~g~~~~--~~~~~~~~~~~~~~~i~g~~~~  304 (361)
                      ++++++.+.   +....  .++|++||++++......++++++++|+++.+|..+.  ...++...++.+++++.++...
T Consensus       236 v~~~~~~~~~~~l~~~~~~~~~d~vld~vg~~~~~~~~~~~l~~~G~~v~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~  315 (367)
T cd08263         236 TVNAAKEDAVAAIREITGGRGVDVVVEALGKPETFKLALDVVRDGGRAVVVGLAPGGATAEIPITRLVRRGIKIIGSYGA  315 (367)
T ss_pred             EecCCcccHHHHHHHHhCCCCCCEEEEeCCCHHHHHHHHHHHhcCCEEEEEccCCCCCccccCHHHHhhCCeEEEecCCC
Confidence            988876443   33333  3699999999987348899999999999999986543  2345555566788888886543


Q ss_pred             C-HHHHHHHHHHHHcCCCcee--E-EEEecccHHHHHHHHHcCCCceEEEEE
Q 018067          305 G-MKETQEMIDFAAKHNIRAD--I-EVIPADYVNTALERLAKADVRYRFVID  352 (361)
Q Consensus       305 ~-~~~~~~~~~ll~~~~~~~~--~-~~~~l~~~~~a~~~~~~~~~~gkvvi~  352 (361)
                      . .+.++++++++.++++++.  + +.+++++++++++.+++++..||+|++
T Consensus       316 ~~~~~~~~~~~ll~~~~l~~~~~~~~~~~~~~~~~a~~~~~~~~~~g~~~~~  367 (367)
T cd08263         316 RPRQDLPELVGLAASGKLDPEALVTHKYKLEEINEAYENLRKGLIHGRAIVE  367 (367)
T ss_pred             CcHHHHHHHHHHHHcCCCCcccceeEEecHHHHHHHHHHHhcCCccceeeeC
Confidence            3 4678999999999998863  3 789999999999999999988999874

NAD(P)(H)-dependent oxidoreductases are the major enzymes in the interconversion of alcohols and aldehydes, or ketones. Alcohol dehydrogenase in the liver converts ethanol and NAD+ to acetaldehyde and NADH, while in yeast and some other microorganisms ADH catalyzes the conversion acetaldehyde to ethanol in alcoholic fermentation. ADH is a member of the medium chain alcohol dehydrogenase family (MDR), which have a NAD(P)(H)-binding domain in a Rossmann fold of a beta-alpha form. The NAD(H)-binding region is comprised of 2 structurally similar halves, each of which contacts a mononucleotide. A GxGxxG motif after the first mononucleotide contact half allows the close contact of the coenzyme with the ADH backbone. The N-terminal catalytic domain has a distant homology to GroES. These proteins typically form dimers (typically higher plants, mammals) or tetramers (yeast, bacteria), and have 2 tightly bound zinc atoms per subu

>cd08266 Zn_ADH_like1 Alcohol dehydrogenases of the MDR family

Probab=100.00  E-value=3.4e-40  Score=306.94  Aligned_cols=333  Identities=24%  Similarity=0.325  Sum_probs=279.6

Q ss_pred             cceeeeeecCCCCCccceeeccCCCCCCeEEEEEeeeccCcchHHhHhcCCCC-CCCCCcccccccEEEEEeCCCCCCCC
Q 018067           11 KNAFGWAAKDTSGVLSPFHFSRRATGEKDVTFKVTHCGICHSDLHMIKNEWGN-TIYPIVPGHEIVGVVTEVGSKVSKFK   89 (361)
Q Consensus        11 ~~~~~~~~~~~~~~l~~~~~~~p~~~~~evlV~v~~~~i~~~D~~~~~g~~~~-~~~p~~lG~e~~G~Vv~vG~~v~~~~   89 (361)
                      |+++.+...+.+..+++.+.+.|.+.+++|+|++.++++|++|++.+.|.... ..+|.++|||++|+|+++|+++..|+
T Consensus         1 ~~a~~~~~~~~~~~~~~~~~~~~~~~~~~v~v~v~~~~i~~~d~~~~~g~~~~~~~~~~~~g~e~~G~v~~~G~~~~~~~   80 (342)
T cd08266           1 MKAVVIRGHGGPEVLEYGDLPEPEPGPDEVLVRVKAAALNHLDLWVRRGMPGIKLPLPHILGSDGAGVVEAVGPGVTNVK   80 (342)
T ss_pred             CeEEEEecCCCccceeEeecCCCCCCCCeEEEEEEeeecCHHHHHHhcCCCCCCCCCCeecccceEEEEEEeCCCCCCCC
Confidence            56666654446677888888888899999999999999999999988875432 24577899999999999999999999


Q ss_pred             CCCEEEeccccCCCCCCcccccCCCCCCcchhcccccccCCCCcCCCcceeEEeecCCceEECCCCCCcccccccchhhh
Q 018067           90 VGDKVGVGCMVGSCRSCDSCAIDLENYCPKVIMTYANKYHDGTITYGGYSDIMVADEHFVVRIPEGTPLDATAPLLCAGI  169 (361)
Q Consensus        90 ~GdrV~~~~~~~~c~~c~~c~~~~~~~c~~~~~~~~~~~~~~~~~~g~~a~~v~v~~~~~~~ip~~~~~~~aa~l~~~~~  169 (361)
                      +||+|++.+.. .|++|.+|.++.+|+|++..+       .|....|+|++|+.++.+.++++|+++++.+++.+++.+.
T Consensus        81 ~Gd~V~~~~~~-~~~~~~~~~~~~~~~~~~~~~-------~g~~~~g~~~~~~~~~~~~~~~~p~~~~~~~a~~~~~~~~  152 (342)
T cd08266          81 PGQRVVIYPGI-SCGRCEYCLAGRENLCAQYGI-------LGEHVDGGYAEYVAVPARNLLPIPDNLSFEEAAAAPLTFL  152 (342)
T ss_pred             CCCEEEEcccc-ccccchhhccccccccccccc-------cccccCcceeEEEEechHHceeCCCCCCHHHHHhhhhHHH
Confidence            99999876555 799999999999999997532       1334578999999999999999999999999999999999


Q ss_pred             hhhhHhhhcCCCCCCCEEEEEcC-ChHHHHHHHHHHHcCCeEEEEeCCchhHHHHHHHcCCCEEecCCCHHHHHH---hc
Q 018067          170 TVYSPLRFYGLDKPGMHVGVVGL-GGLGHVAVKFAKAMGVKVTVISTSPSKKSEAIERLGADSFLVSRDQDEMQA---AM  245 (361)
Q Consensus       170 ta~~~l~~~~~~~~g~~vlV~Ga-g~vG~~a~~la~~~g~~vi~~~~~~~~~~~~~~~~g~~~vv~~~~~~~~~~---~~  245 (361)
                      +||+++.....++++++++|+|+ +.+|++++++++..|+++++++++++++..+ +.++.+.+++..+.+....   ..
T Consensus       153 ~a~~~l~~~~~~~~~~~vlI~g~~~~iG~~~~~~~~~~g~~v~~~~~~~~~~~~~-~~~~~~~~~~~~~~~~~~~~~~~~  231 (342)
T cd08266         153 TAWHMLVTRARLRPGETVLVHGAGSGVGSAAIQIAKLFGATVIATAGSEDKLERA-KELGADYVIDYRKEDFVREVRELT  231 (342)
T ss_pred             HHHHHHHHhcCCCCCCEEEEECCCchHHHHHHHHHHHcCCEEEEEeCCHHHHHHH-HHcCCCeEEecCChHHHHHHHHHh
Confidence            99999887778899999999998 7999999999999999999998888776655 6788877777665443332   22


Q ss_pred             --CCccEEEEcCCCcccHHHHHhccccCCEEEEecCCCCC-cccChHHHHhCCcEEEecccCCHHHHHHHHHHHHcCCCc
Q 018067          246 --GTMDGIIDTVSAVHPLMPLIGLLKSQGKLVLVGAPEKP-LELPAFSLLMGRKIVGGSMIGGMKETQEMIDFAAKHNIR  322 (361)
Q Consensus       246 --~g~d~vid~~g~~~~~~~~~~~l~~~G~~v~~g~~~~~-~~~~~~~~~~~~~~i~g~~~~~~~~~~~~~~ll~~~~~~  322 (361)
                        .++|++++++|... +...+++++++|+++.+|..... ..++....+.+++++.+.......++.++++++.++.++
T Consensus       232 ~~~~~d~~i~~~g~~~-~~~~~~~l~~~G~~v~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~l~  310 (342)
T cd08266         232 GKRGVDVVVEHVGAAT-WEKSLKSLARGGRLVTCGATTGYEAPIDLRHVFWRQLSILGSTMGTKAELDEALRLVFRGKLK  310 (342)
T ss_pred             CCCCCcEEEECCcHHH-HHHHHHHhhcCCEEEEEecCCCCCCCcCHHHHhhcceEEEEEecCCHHHHHHHHHHHHcCCcc
Confidence              37999999999876 88999999999999999875432 344444556788999998888888899999999999988


Q ss_pred             eeE-EEEecccHHHHHHHHHcCCCceEEEEEe
Q 018067          323 ADI-EVIPADYVNTALERLAKADVRYRFVIDV  353 (361)
Q Consensus       323 ~~~-~~~~l~~~~~a~~~~~~~~~~gkvvi~~  353 (361)
                      +.+ +.|+++++++|++.+.+++..+|+++++
T Consensus       311 ~~~~~~~~~~~~~~a~~~~~~~~~~~kvv~~~  342 (342)
T cd08266         311 PVIDSVFPLEEAAEAHRRLESREQFGKIVLTP  342 (342)
T ss_pred             cceeeeEcHHHHHHHHHHHHhCCCCceEEEeC
Confidence            655 8999999999999999888789999863

This group contains proteins related to the zinc-dependent alcohol dehydrogenases. However, while the group has structural zinc site characteristic of these enzymes, it lacks the consensus site for a catalytic zinc. NAD(P)(H)-dependent oxidoreductases are the major enzymes in the interconversion of alcohols and aldehydes, or ketones. Alcohol dehydrogenase in the liver converts ethanol and NAD+ to acetaldehyde and NADH, while in yeast and some other microorganisms ADH catalyzes the conversion acetaldehyde to ethanol in alcoholic fermentation. ADH is a member of the medium chain alcohol dehydrogenase family (MDR), which has a NAD(P)(H)-binding domain in a Rossmann fold of a beta-alpha form. The NAD(H)-binding region is comprised of 2 structurally similar halves, each of which contacts a mononucleotide. A GxGxxG motif after the first mononucleotide contact half allows the close contact of the coenzyme with the ADH backbone

>cd08261 Zn_ADH7 Alcohol dehydrogenases of the MDR family

Probab=100.00  E-value=4.9e-40  Score=306.14  Aligned_cols=328  Identities=26%  Similarity=0.386  Sum_probs=272.4

Q ss_pred             cceeeeeecCCCCCccceeeccCCCCCCeEEEEEeeeccCcchHHhHhcCCCCCCCCCcccccccEEEEEeCCCCCCCCC
Q 018067           11 KNAFGWAAKDTSGVLSPFHFSRRATGEKDVTFKVTHCGICHSDLHMIKNEWGNTIYPIVPGHEIVGVVTEVGSKVSKFKV   90 (361)
Q Consensus        11 ~~~~~~~~~~~~~~l~~~~~~~p~~~~~evlV~v~~~~i~~~D~~~~~g~~~~~~~p~~lG~e~~G~Vv~vG~~v~~~~~   90 (361)
                      |+++.+.   .++.+.+.+++.|.++++|++|+|.++++|+.|+....+..+...+|.++|+|++|+|+++|++++.|++
T Consensus         1 ~~a~~~~---~~~~~~~~~~~~~~~~~~~v~v~v~~~~l~~~d~~~~~~~~~~~~~~~~~g~e~~G~V~~~G~~v~~~~~   77 (337)
T cd08261           1 MKALVCE---KPGRLEVVDIPEPVPGAGEVLVRVKRVGICGSDLHIYHGRNPFASYPRILGHELSGEVVEVGEGVAGLKV   77 (337)
T ss_pred             CeEEEEe---CCCceEEEECCCCCCCCCeEEEEEEEEeEcccChHHHcCCCCcCCCCcccccccEEEEEEeCCCCCCCCC
Confidence            4555554   3457888899999999999999999999999999998887655556788999999999999999999999


Q ss_pred             CCEEEeccccCCCCCCcccccCCCCCCcchhcccccccCCCCcCCCcceeEEeecCCceEECCCCCCcccccccchhhhh
Q 018067           91 GDKVGVGCMVGSCRSCDSCAIDLENYCPKVIMTYANKYHDGTITYGGYSDIMVADEHFVVRIPEGTPLDATAPLLCAGIT  170 (361)
Q Consensus        91 GdrV~~~~~~~~c~~c~~c~~~~~~~c~~~~~~~~~~~~~~~~~~g~~a~~v~v~~~~~~~ip~~~~~~~aa~l~~~~~t  170 (361)
                      ||+|+..++ ++||.|..|..+.+|.|.+...       .+....|+|++|+.++.+ ++++|+++++++++.+ ..+.+
T Consensus        78 Gd~V~~~~~-~~~~~~~~~~~~~~~~~~~~~~-------~~~~~~g~~~~~v~v~~~-~~~~p~~~~~~~aa~~-~~~~~  147 (337)
T cd08261          78 GDRVVVDPY-ISCGECYACRKGRPNCCENLQV-------LGVHRDGGFAEYIVVPAD-ALLVPEGLSLDQAALV-EPLAI  147 (337)
T ss_pred             CCEEEECCC-CCCCCChhhhCcCcccCCCCCe-------eeecCCCcceeEEEechh-eEECCCCCCHHHhhhh-chHHH
Confidence            999976544 4999999999999999954321       122347899999999999 9999999999999876 46778


Q ss_pred             hhhHhhhcCCCCCCCEEEEEcCChHHHHHHHHHHHcCCeEEEEeCCchhHHHHHHHcCCCEEecCCCHH---HHHHhcC-
Q 018067          171 VYSPLRFYGLDKPGMHVGVVGLGGLGHVAVKFAKAMGVKVTVISTSPSKKSEAIERLGADSFLVSRDQD---EMQAAMG-  246 (361)
Q Consensus       171 a~~~l~~~~~~~~g~~vlV~Gag~vG~~a~~la~~~g~~vi~~~~~~~~~~~~~~~~g~~~vv~~~~~~---~~~~~~~-  246 (361)
                      +++++ ....+++|++|||+|+|.+|++++|+|+.+|++|+++++++++...+ +++|+++++++++.+   .+..+.. 
T Consensus       148 a~~~~-~~~~l~~g~~vLI~g~g~vG~~a~~lA~~~g~~v~~~~~s~~~~~~~-~~~g~~~v~~~~~~~~~~~l~~~~~~  225 (337)
T cd08261         148 GAHAV-RRAGVTAGDTVLVVGAGPIGLGVIQVAKARGARVIVVDIDDERLEFA-RELGADDTINVGDEDVAARLRELTDG  225 (337)
T ss_pred             HHHHH-HhcCCCCCCEEEEECCCHHHHHHHHHHHHcCCeEEEECCCHHHHHHH-HHhCCCEEecCcccCHHHHHHHHhCC
Confidence            88887 56678999999999889999999999999999999998887776655 789999999887643   3333433 


Q ss_pred             -CccEEEEcCCCcccHHHHHhccccCCEEEEecCCCCCcccChHHHHhCCcEEEecccCCHHHHHHHHHHHHcCCCce--
Q 018067          247 -TMDGIIDTVSAVHPLMPLIGLLKSQGKLVLVGAPEKPLELPAFSLLMGRKIVGGSMIGGMKETQEMIDFAAKHNIRA--  323 (361)
Q Consensus       247 -g~d~vid~~g~~~~~~~~~~~l~~~G~~v~~g~~~~~~~~~~~~~~~~~~~i~g~~~~~~~~~~~~~~ll~~~~~~~--  323 (361)
                       ++|++||++|+...+..++++++++|+++.+|.......++...+..+++++.++.....+.++++++++.++.+++  
T Consensus       226 ~~vd~vld~~g~~~~~~~~~~~l~~~G~~i~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~i~~~~  305 (337)
T cd08261         226 EGADVVIDATGNPASMEEAVELVAHGGRVVLVGLSKGPVTFPDPEFHKKELTILGSRNATREDFPDVIDLLESGKVDPEA  305 (337)
T ss_pred             CCCCEEEECCCCHHHHHHHHHHHhcCCEEEEEcCCCCCCccCHHHHHhCCCEEEEeccCChhhHHHHHHHHHcCCCChhh
Confidence             69999999987665889999999999999998765444555556667888888876666678999999999999987  


Q ss_pred             eE-EEEecccHHHHHHHHHcCC-CceEEEEEe
Q 018067          324 DI-EVIPADYVNTALERLAKAD-VRYRFVIDV  353 (361)
Q Consensus       324 ~~-~~~~l~~~~~a~~~~~~~~-~~gkvvi~~  353 (361)
                      .+ ..+++++++++++.+.+++ ..+|+|+++
T Consensus       306 ~~~~~~~~~~~~~a~~~~~~~~~~~~k~v~~~  337 (337)
T cd08261         306 LITHRFPFEDVPEAFDLWEAPPGGVIKVLIEF  337 (337)
T ss_pred             heEEEeeHHHHHHHHHHHhcCCCceEEEEEeC
Confidence            44 8999999999999999884 669999863

This group contains members identified as related to zinc-dependent alcohol dehydrogenase and other members of the MDR family. The medium chain dehydrogenases/reductase (MDR)/zinc-dependent alcohol dehydrogenase-like family, which contains the zinc-dependent alcohol dehydrogenase (ADH-Zn) and related proteins, is a diverse group of proteins related to the first identified member, class I mammalian ADH. MDRs display a broad range of activities and are distinguished from the smaller short chain dehydrogenases (~ 250 amino acids vs. the ~ 350 amino acids of the MDR). The MDR proteins have 2 domains: a C-terminal NAD(P)-binding Rossmann fold domain of a beta-alpha form and an N-terminal catalytic domain with distant homology to GroES. The MDR group includes various activities, including the founding alcohol dehydrogenase (ADH), quinone reductase, sorbitol dehydrogenase, formaldehyde dehydrogenase, butanediol DH, ketose reductase,

>cd08265 Zn_ADH3 Alcohol dehydrogenases of the MDR family

Probab=100.00  E-value=2.4e-40  Score=313.27  Aligned_cols=317  Identities=23%  Similarity=0.361  Sum_probs=259.2

Q ss_pred             CccceeeccCCCCCCeEEEEEeeeccCcchHHhHhcCC------C-CCCCCCcccccccEEEEEeCCCCCCCCCCCEEEe
Q 018067           24 VLSPFHFSRRATGEKDVTFKVTHCGICHSDLHMIKNEW------G-NTIYPIVPGHEIVGVVTEVGSKVSKFKVGDKVGV   96 (361)
Q Consensus        24 ~l~~~~~~~p~~~~~evlV~v~~~~i~~~D~~~~~g~~------~-~~~~p~~lG~e~~G~Vv~vG~~v~~~~~GdrV~~   96 (361)
                      .++++++|.|++++++|+||++++++|++|++.+.+..      + ...+|.++|||++|+|+++|+++..|++||||++
T Consensus        38 ~~~~~~~~~p~~~~~ev~V~v~a~gi~~~D~~~~~~~~~~~~~~~~~~~~~~~~g~e~~G~V~~vG~~v~~~~~Gd~V~~  117 (384)
T cd08265          38 ELRVEDVPVPNLKPDEILIRVKACGICGSDIHLYETDKDGYILYPGLTEFPVVIGHEFSGVVEKTGKNVKNFEKGDPVTA  117 (384)
T ss_pred             CEEEEECCCCCCCCCEEEEEEEEEEEcHhHHHHHcCCCCcccccCcccCCCcccccceEEEEEEECCCCCCCCCCCEEEE
Confidence            58899999999999999999999999999998876321      1 1345789999999999999999999999999988


Q ss_pred             ccccCCCCCCcccccCCCCCCcchhcccccccCCCCcCCCcceeEEeecCCceEECCCCC-------Ccccccccchhhh
Q 018067           97 GCMVGSCRSCDSCAIDLENYCPKVIMTYANKYHDGTITYGGYSDIMVADEHFVVRIPEGT-------PLDATAPLLCAGI  169 (361)
Q Consensus        97 ~~~~~~c~~c~~c~~~~~~~c~~~~~~~~~~~~~~~~~~g~~a~~v~v~~~~~~~ip~~~-------~~~~aa~l~~~~~  169 (361)
                      .+.. +|++|..|..+.+++|..+..       .|....|+|++|+.++.+.++++|+++       ++. ++.++.++.
T Consensus       118 ~~~~-~~~~~~~c~~~~~~~~~~~~~-------~g~~~~g~~~~~v~v~~~~~~~lP~~~~~~~~~~~~~-~a~~~~~~~  188 (384)
T cd08265         118 EEMM-WCGMCRACRSGSPNHCKNLKE-------LGFSADGAFAEYIAVNARYAWEINELREIYSEDKAFE-AGALVEPTS  188 (384)
T ss_pred             CCCC-CCCCChhhhCcCcccCCCcce-------eeecCCCcceeeEEechHHeEECCccccccccCCCHH-HhhhhhHHH
Confidence            7765 999999999999999997532       123347999999999999999999864       344 556777889


Q ss_pred             hhhhHhhhc-CCCCCCCEEEEEcCChHHHHHHHHHHHcCC-eEEEEeCCchhHHHHHHHcCCCEEecCCCH------HHH
Q 018067          170 TVYSPLRFY-GLDKPGMHVGVVGLGGLGHVAVKFAKAMGV-KVTVISTSPSKKSEAIERLGADSFLVSRDQ------DEM  241 (361)
Q Consensus       170 ta~~~l~~~-~~~~~g~~vlV~Gag~vG~~a~~la~~~g~-~vi~~~~~~~~~~~~~~~~g~~~vv~~~~~------~~~  241 (361)
                      +||+++... ..+++|++|+|+|+|.+|++++++|+.+|+ +|+.++++++ +.++++++|+++++++++.      +.+
T Consensus       189 ta~~al~~~~~~~~~g~~VlV~g~g~vG~~ai~lA~~~G~~~vi~~~~~~~-~~~~~~~~g~~~~v~~~~~~~~~~~~~v  267 (384)
T cd08265         189 VAYNGLFIRGGGFRPGAYVVVYGAGPIGLAAIALAKAAGASKVIAFEISEE-RRNLAKEMGADYVFNPTKMRDCLSGEKV  267 (384)
T ss_pred             HHHHHHHhhcCCCCCCCEEEEECCCHHHHHHHHHHHHcCCCEEEEEcCCHH-HHHHHHHcCCCEEEcccccccccHHHHH
Confidence            999998655 678999999999889999999999999999 6888877776 4577789999988887632      234


Q ss_pred             HHhcC--CccEEEEcCCCc-ccHHHHHhccccCCEEEEecCCCCCcccChHHHHhCCcEEEeccc-CCHHHHHHHHHHHH
Q 018067          242 QAAMG--TMDGIIDTVSAV-HPLMPLIGLLKSQGKLVLVGAPEKPLELPAFSLLMGRKIVGGSMI-GGMKETQEMIDFAA  317 (361)
Q Consensus       242 ~~~~~--g~d~vid~~g~~-~~~~~~~~~l~~~G~~v~~g~~~~~~~~~~~~~~~~~~~i~g~~~-~~~~~~~~~~~ll~  317 (361)
                      .++..  ++|+++|+.|+. ..+..++++++++|+++.+|.......++...+..+..++.++.. .....++++++++.
T Consensus       268 ~~~~~g~gvDvvld~~g~~~~~~~~~~~~l~~~G~~v~~g~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~ll~  347 (384)
T cd08265         268 MEVTKGWGADIQVEAAGAPPATIPQMEKSIAINGKIVYIGRAATTVPLHLEVLQVRRAQIVGAQGHSGHGIFPSVIKLMA  347 (384)
T ss_pred             HHhcCCCCCCEEEECCCCcHHHHHHHHHHHHcCCEEEEECCCCCCCcccHHHHhhCceEEEEeeccCCcchHHHHHHHHH
Confidence            44443  699999999974 347889999999999999997654455555666777888888764 23346889999999


Q ss_pred             cCCCcee---EEEEecccHHHHHHHHHcCCCceEEEE
Q 018067          318 KHNIRAD---IEVIPADYVNTALERLAKADVRYRFVI  351 (361)
Q Consensus       318 ~~~~~~~---~~~~~l~~~~~a~~~~~~~~~~gkvvi  351 (361)
                      ++.+++.   .+.|+++++++|++.+.++. .+|+++
T Consensus       348 ~g~l~~~~~~~~~~~~~~~~~a~~~~~~~~-~~kvvv  383 (384)
T cd08265         348 SGKIDMTKIITARFPLEGIMEAIKAASERT-DGKITI  383 (384)
T ss_pred             cCCCChHHheEEEeeHHHHHHHHHHHhcCC-CceEEe
Confidence            9998863   38899999999999976654 688875

This group resembles the zinc-dependent alcohol dehydrogenase and has the catalytic and structural zinc-binding sites characteristic of this group. The medium chain dehydrogenases/reductase (MDR)/zinc-dependent alcohol dehydrogenase-like family, which contains the zinc-dependent alcohol dehydrogenase (ADH-Zn) and related proteins, is a diverse group of proteins related to the first identified member, class I mammalian ADH. MDRs display a broad range of activities and are distinguished from the smaller short chain dehydrogenases (~ 250 amino acids vs. the ~ 350 amino acids of the MDR). The MDR proteins have 2 domains: a C-terminal NAD(P) binding-Rossmann fold domain of a beta-alpha form and an N-terminal catalytic domain with distant homology to GroES. The MDR group contains a host of activities, including the founding alcohol dehydrogenase (ADH), quinone reductase, sorbitol dehydrogenase, formaldehyde dehydrogenase, butanedi

>cd08287 FDH_like_ADH3 formaldehyde dehydrogenase (FDH)-like

Probab=100.00  E-value=6.7e-40  Score=306.17  Aligned_cols=327  Identities=22%  Similarity=0.277  Sum_probs=266.1

Q ss_pred             cceeeeeecCCCCCccceeeccCCC-CCCeEEEEEeeeccCcchHHhHhcCCCCCCCCCcccccccEEEEEeCCCCCCCC
Q 018067           11 KNAFGWAAKDTSGVLSPFHFSRRAT-GEKDVTFKVTHCGICHSDLHMIKNEWGNTIYPIVPGHEIVGVVTEVGSKVSKFK   89 (361)
Q Consensus        11 ~~~~~~~~~~~~~~l~~~~~~~p~~-~~~evlV~v~~~~i~~~D~~~~~g~~~~~~~p~~lG~e~~G~Vv~vG~~v~~~~   89 (361)
                      |+++.+.   .+++++++++|.|.| +++||+||+.++++|++|++.+.|..+. ..|.++|||++|+|+++|+++..++
T Consensus         1 m~~~~~~---~~~~~~~~~~~~p~~~~~~ev~V~v~~~~i~~~d~~~~~g~~~~-~~~~~~g~e~~G~V~~vG~~v~~~~   76 (345)
T cd08287           1 MRATVIH---GPGDIRVEEVPDPVIEEPTDAVIRVVATCVCGSDLWPYRGVSPT-RAPAPIGHEFVGVVEEVGSEVTSVK   76 (345)
T ss_pred             CceeEEe---cCCceeEEeCCCCCCCCCCeEEEEEeeeeecccchhhhcCCCCC-CCCcccccceEEEEEEeCCCCCccC
Confidence            5566663   456788999999986 8999999999999999999988886653 4578999999999999999999999


Q ss_pred             CCCEEEeccccCCCCCCcccccCCCCCCcchhcccccccCCCCcCCCcceeEEeecCC--ceEECCCCCCccccc-----
Q 018067           90 VGDKVGVGCMVGSCRSCDSCAIDLENYCPKVIMTYANKYHDGTITYGGYSDIMVADEH--FVVRIPEGTPLDATA-----  162 (361)
Q Consensus        90 ~GdrV~~~~~~~~c~~c~~c~~~~~~~c~~~~~~~~~~~~~~~~~~g~~a~~v~v~~~--~~~~ip~~~~~~~aa-----  162 (361)
                      +||+|++. +...|++|..|..+..++|.+..+.       +....|+|++|+.++.+  .++++|++++++.+.     
T Consensus        77 ~Gd~V~~~-~~~~~~~~~~~~~~~~~~~~~~~~~-------~~~~~g~~~~~~~v~~~~~~~~~lP~~l~~~~~~~~~~~  148 (345)
T cd08287          77 PGDFVIAP-FAISDGTCPFCRAGFTTSCVHGGFW-------GAFVDGGQGEYVRVPLADGTLVKVPGSPSDDEDLLPSLL  148 (345)
T ss_pred             CCCEEEec-cccCCCCChhhhCcCcccCCCCCcc-------cCCCCCceEEEEEcchhhCceEECCCCCChhhhhhhhhH
Confidence            99999763 4457999999999999999974321       23467999999999975  999999999882221     


Q ss_pred             ccchhhhhhhhHhhhcCCCCCCCEEEEEcCChHHHHHHHHHHHcCCe-EEEEeCCchhHHHHHHHcCCCEEecCCCHHH-
Q 018067          163 PLLCAGITVYSPLRFYGLDKPGMHVGVVGLGGLGHVAVKFAKAMGVK-VTVISTSPSKKSEAIERLGADSFLVSRDQDE-  240 (361)
Q Consensus       163 ~l~~~~~ta~~~l~~~~~~~~g~~vlV~Gag~vG~~a~~la~~~g~~-vi~~~~~~~~~~~~~~~~g~~~vv~~~~~~~-  240 (361)
                      .+.+.+.+||+++. ...+++|++|+|.|+|.+|++++|+|+++|++ +++++++++ +.++++++|++.+++++..+. 
T Consensus       149 ~l~~~~~~a~~~~~-~~~~~~g~~vlI~g~g~vg~~~~~lak~~G~~~v~~~~~~~~-~~~~~~~~ga~~v~~~~~~~~~  226 (345)
T cd08287         149 ALSDVMGTGHHAAV-SAGVRPGSTVVVVGDGAVGLCAVLAAKRLGAERIIAMSRHED-RQALAREFGATDIVAERGEEAV  226 (345)
T ss_pred             hhhcHHHHHHHHHH-hcCCCCCCEEEEECCCHHHHHHHHHHHHcCCCEEEEECCCHH-HHHHHHHcCCceEecCCcccHH
Confidence            22356788998885 45689999999988899999999999999996 555555544 456668899999998876543 


Q ss_pred             --HHHhcC--CccEEEEcCCCcccHHHHHhccccCCEEEEecCCCCCcccChHHHHhCCcEEEecccCCHHHHHHHHHHH
Q 018067          241 --MQAAMG--TMDGIIDTVSAVHPLMPLIGLLKSQGKLVLVGAPEKPLELPAFSLLMGRKIVGGSMIGGMKETQEMIDFA  316 (361)
Q Consensus       241 --~~~~~~--g~d~vid~~g~~~~~~~~~~~l~~~G~~v~~g~~~~~~~~~~~~~~~~~~~i~g~~~~~~~~~~~~~~ll  316 (361)
                        +.++..  ++|+++|++|+...+..++++++++|+++.+|.......++....+.+++++.+......+.++++++++
T Consensus       227 ~~i~~~~~~~~~d~il~~~g~~~~~~~~~~~l~~~g~~v~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  306 (345)
T cd08287         227 ARVRELTGGVGADAVLECVGTQESMEQAIAIARPGGRVGYVGVPHGGVELDVRELFFRNVGLAGGPAPVRRYLPELLDDV  306 (345)
T ss_pred             HHHHHhcCCCCCCEEEECCCCHHHHHHHHHhhccCCEEEEecccCCCCccCHHHHHhcceEEEEecCCcHHHHHHHHHHH
Confidence              334433  6999999999876689999999999999999876544555554556799999987777778899999999


Q ss_pred             HcCCCce---eEEEEecccHHHHHHHHHcCCCceEEEEE
Q 018067          317 AKHNIRA---DIEVIPADYVNTALERLAKADVRYRFVID  352 (361)
Q Consensus       317 ~~~~~~~---~~~~~~l~~~~~a~~~~~~~~~~gkvvi~  352 (361)
                      .++++++   ..+.++++++++|++.+.+++. .|++|+
T Consensus       307 ~~~~l~~~~~~~~~~~l~~~~~a~~~~~~~~~-~k~~~~  344 (345)
T cd08287         307 LAGRINPGRVFDLTLPLDEVAEGYRAMDERRA-IKVLLR  344 (345)
T ss_pred             HcCCCCHHHhEEeeecHHHHHHHHHHHhCCCc-eEEEeC
Confidence            9999885   3389999999999999887765 599985

This group contains proteins identified as alcohol dehydrogenases and glutathione-dependant formaldehyde dehydrogenases (FDH) of the zinc-dependent/medium chain alcohol dehydrogenase family. The MDR family uses NAD(H) as a cofactor in the interconversion of alcohols and aldehydes, or ketones. FDH converts formaldehyde and NAD to formate and NADH. The initial step in this process the spontaneous formation of a S-(hydroxymethyl)glutathione adduct from formaldehyde and glutathione, followed by FDH-mediated oxidation (and detoxification) of the adduct to S-formylglutathione. The medium chain alcohol dehydrogenase family (MDR) has a NAD(P)(H)-binding domain in a Rossmann fold of a beta-alpha form. The N-terminal region typically has an all-beta catalytic domain. These proteins typically form dimers (typically higher plants, mammals) or tetramers (yeast, bacteria), and have 2 tightly bound zinc atoms per subunit.

>PRK05396 tdh L-threonine 3-dehydrogenase; Validated

Probab=100.00  E-value=3.6e-40  Score=307.53  Aligned_cols=329  Identities=22%  Similarity=0.314  Sum_probs=261.6

Q ss_pred             cceeeeeecCCCCCccceeeccCCCCCCeEEEEEeeeccCcchHHhHhcCC---CCCCCCCcccccccEEEEEeCCCCCC
Q 018067           11 KNAFGWAAKDTSGVLSPFHFSRRATGEKDVTFKVTHCGICHSDLHMIKNEW---GNTIYPIVPGHEIVGVVTEVGSKVSK   87 (361)
Q Consensus        11 ~~~~~~~~~~~~~~l~~~~~~~p~~~~~evlV~v~~~~i~~~D~~~~~g~~---~~~~~p~~lG~e~~G~Vv~vG~~v~~   87 (361)
                      ||++++..  .++.++++++|.|.+.++||+||++++++|++|++++.+..   ....+|.++|||++|+|+++|+++..
T Consensus         1 ~~~~~~~~--~~~~~~~~~~~~p~~~~~evlV~v~~~~v~~~d~~~~~~~~~~~~~~~~p~~~g~e~~G~V~~vG~~v~~   78 (341)
T PRK05396          1 MKALVKLK--AEPGLWLTDVPVPEPGPNDVLIKVKKTAICGTDVHIYNWDEWAQKTIPVPMVVGHEFVGEVVEVGSEVTG   78 (341)
T ss_pred             CceEEEec--CCCceEEEECCCCCCCCCeEEEEEEEEEEcccchHhhcCCCcccccCCCCcccceeeEEEEEEeCCCCCc
Confidence            45555533  44679999999999999999999999999999999776531   12346778999999999999999999


Q ss_pred             CCCCCEEEeccccCCCCCCcccccCCCCCCcchhcccccccCCCCcCCCcceeEEeecCCceEECCCCCCcccccccchh
Q 018067           88 FKVGDKVGVGCMVGSCRSCDSCAIDLENYCPKVIMTYANKYHDGTITYGGYSDIMVADEHFVVRIPEGTPLDATAPLLCA  167 (361)
Q Consensus        88 ~~~GdrV~~~~~~~~c~~c~~c~~~~~~~c~~~~~~~~~~~~~~~~~~g~~a~~v~v~~~~~~~ip~~~~~~~aa~l~~~  167 (361)
                      |++||+|+..+.+ +|++|++|..+.+++|++..+.       +...+|+|++|+.++.+.++++|+++++.+++.+ ..
T Consensus        79 ~~~Gd~V~~~~~~-~~~~~~~~~~~~~~~~~~~~~~-------~~~~~g~~~~~~~v~~~~~~~iP~~l~~~~~~~~-~~  149 (341)
T PRK05396         79 FKVGDRVSGEGHI-VCGHCRNCRAGRRHLCRNTKGV-------GVNRPGAFAEYLVIPAFNVWKIPDDIPDDLAAIF-DP  149 (341)
T ss_pred             CCCCCEEEECCCC-CCCCChhhhCcChhhCCCccee-------eecCCCcceeeEEechHHeEECcCCCCHHHhHhh-hH
Confidence            9999999887666 8999999999999999864211       2235799999999999999999999999888744 45


Q ss_pred             hhhhhhHhhhcCCCCCCCEEEEEcCChHHHHHHHHHHHcCC-eEEEEeCCchhHHHHHHHcCCCEEecCCCHHH---HHH
Q 018067          168 GITVYSPLRFYGLDKPGMHVGVVGLGGLGHVAVKFAKAMGV-KVTVISTSPSKKSEAIERLGADSFLVSRDQDE---MQA  243 (361)
Q Consensus       168 ~~ta~~~l~~~~~~~~g~~vlV~Gag~vG~~a~~la~~~g~-~vi~~~~~~~~~~~~~~~~g~~~vv~~~~~~~---~~~  243 (361)
                      +.++++++..  ...+|++|+|.|+|.+|++++|+|+.+|+ +++++++++++. ++.+++|++.++++++.+.   +..
T Consensus       150 ~~~~~~~~~~--~~~~g~~vlV~~~g~vg~~~~~la~~~G~~~v~~~~~~~~~~-~~~~~lg~~~~~~~~~~~~~~~~~~  226 (341)
T PRK05396        150 FGNAVHTALS--FDLVGEDVLITGAGPIGIMAAAVAKHVGARHVVITDVNEYRL-ELARKMGATRAVNVAKEDLRDVMAE  226 (341)
T ss_pred             HHHHHHHHHc--CCCCCCeEEEECCCHHHHHHHHHHHHcCCCEEEEEcCCHHHH-HHHHHhCCcEEecCccccHHHHHHH
Confidence            5666655543  24689999998889999999999999999 577776565554 5558899999888776433   333


Q ss_pred             hc--CCccEEEEcCCCcccHHHHHhccccCCEEEEecCCCCCcccChHHHHhCCcEEEecccCC-HHHHHHHHHHHHcC-
Q 018067          244 AM--GTMDGIIDTVSAVHPLMPLIGLLKSQGKLVLVGAPEKPLELPAFSLLMGRKIVGGSMIGG-MKETQEMIDFAAKH-  319 (361)
Q Consensus       244 ~~--~g~d~vid~~g~~~~~~~~~~~l~~~G~~v~~g~~~~~~~~~~~~~~~~~~~i~g~~~~~-~~~~~~~~~ll~~~-  319 (361)
                      +.  .++|++|||.|+...+..++++++++|+++.+|..+....++...+..+++++.++.... .+.+..+++++.++ 
T Consensus       227 ~~~~~~~d~v~d~~g~~~~~~~~~~~l~~~G~~v~~g~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~  306 (341)
T PRK05396        227 LGMTEGFDVGLEMSGAPSAFRQMLDNMNHGGRIAMLGIPPGDMAIDWNKVIFKGLTIKGIYGREMFETWYKMSALLQSGL  306 (341)
T ss_pred             hcCCCCCCEEEECCCCHHHHHHHHHHHhcCCEEEEEecCCCCCcccHHHHhhcceEEEEEEccCccchHHHHHHHHHcCC
Confidence            43  379999999998766899999999999999999765544555566777888888865322 23466788899888 


Q ss_pred             CCceeE-EEEecccHHHHHHHHHcCCCceEEEEEeC
Q 018067          320 NIRADI-EVIPADYVNTALERLAKADVRYRFVIDVA  354 (361)
Q Consensus       320 ~~~~~~-~~~~l~~~~~a~~~~~~~~~~gkvvi~~~  354 (361)
                      ++.+.+ +.++++++++||+.+.+++ .||++++++
T Consensus       307 ~~~~~~~~~~~l~~~~~a~~~~~~~~-~gk~vv~~~  341 (341)
T PRK05396        307 DLSPIITHRFPIDDFQKGFEAMRSGQ-SGKVILDWD  341 (341)
T ss_pred             ChhHheEEEEeHHHHHHHHHHHhcCC-CceEEEecC
Confidence            444444 8999999999999998887 799998764

>cd08284 FDH_like_2 Glutathione-dependent formaldehyde dehydrogenase related proteins, child 2

Probab=100.00  E-value=6.2e-40  Score=306.26  Aligned_cols=330  Identities=22%  Similarity=0.290  Sum_probs=267.9

Q ss_pred             cceeeeeecCCCCCccceeeccCCCC-CCeEEEEEeeeccCcchHHhHhcCCCCCCCCCcccccccEEEEEeCCCCCCCC
Q 018067           11 KNAFGWAAKDTSGVLSPFHFSRRATG-EKDVTFKVTHCGICHSDLHMIKNEWGNTIYPIVPGHEIVGVVTEVGSKVSKFK   89 (361)
Q Consensus        11 ~~~~~~~~~~~~~~l~~~~~~~p~~~-~~evlV~v~~~~i~~~D~~~~~g~~~~~~~p~~lG~e~~G~Vv~vG~~v~~~~   89 (361)
                      |+++.+.   ++..+++++++.|.+. ++||+|++.++++|+.|++.+.|.++ ..+|.++|+|++|+|+++|++++.++
T Consensus         1 ~~a~~~~---~~~~~~~~~~~~p~~~~~~~v~i~v~~~~i~~~d~~~~~g~~~-~~~~~~~g~e~~G~V~~vG~~v~~~~   76 (344)
T cd08284           1 MKAVVFK---GPGDVRVEEVPIPQIQDPTDAIVKVTAAAICGSDLHIYRGHIP-STPGFVLGHEFVGEVVEVGPEVRTLK   76 (344)
T ss_pred             CeeEEEe---cCCCceEEeccCCCCCCCCeEEEEEEEeeccccchhhhcCCCC-CCCCcccccceEEEEEeeCCCccccC
Confidence            4555553   3467889999999985 99999999999999999998887655 34578899999999999999999999


Q ss_pred             CCCEEEeccccCCCCCCcccccCCCCCCcchhcccccccCCCCcCCCcceeEEeecCC--ceEECCCCCCcccccccchh
Q 018067           90 VGDKVGVGCMVGSCRSCDSCAIDLENYCPKVIMTYANKYHDGTITYGGYSDIMVADEH--FVVRIPEGTPLDATAPLLCA  167 (361)
Q Consensus        90 ~GdrV~~~~~~~~c~~c~~c~~~~~~~c~~~~~~~~~~~~~~~~~~g~~a~~v~v~~~--~~~~ip~~~~~~~aa~l~~~  167 (361)
                      +||+|+..+.. +|+.|.+|.++.++.|.+....  +. ......+|+|++|+.++.+  .++++|+++++++++.+++.
T Consensus        77 ~Gd~V~~~~~~-~~~~~~~~~~~~~~~~~~~~~~--~~-~~~~~~~g~~~~~~~v~~~~~~~~~~p~~l~~~~a~~l~~~  152 (344)
T cd08284          77 VGDRVVSPFTI-ACGECFYCRRGQSGRCAKGGLF--GY-AGSPNLDGAQAEYVRVPFADGTLLKLPDGLSDEAALLLGDI  152 (344)
T ss_pred             CCCEEEEcccC-CCCCChHHhCcCcccCCCCccc--cc-cccCCCCCceeEEEEcccccCceEECCCCCCHHHhhhhcCc
Confidence            99999877654 8999999999999999864211  00 0011246999999999865  99999999999999999999


Q ss_pred             hhhhhhHhhhcCCCCCCCEEEEEcCChHHHHHHHHHHHcCC-eEEEEeCCchhHHHHHHHcCCCEEecCCCH---HHHHH
Q 018067          168 GITVYSPLRFYGLDKPGMHVGVVGLGGLGHVAVKFAKAMGV-KVTVISTSPSKKSEAIERLGADSFLVSRDQ---DEMQA  243 (361)
Q Consensus       168 ~~ta~~~l~~~~~~~~g~~vlV~Gag~vG~~a~~la~~~g~-~vi~~~~~~~~~~~~~~~~g~~~vv~~~~~---~~~~~  243 (361)
                      +.|||+++.. ..+.+|++|||+|+|.+|++++++|+.+|+ +++++++.+++. .+++++|+. .++.+..   ..+.+
T Consensus       153 ~~ta~~~~~~-~~~~~~~~vlI~g~g~vg~~~~~~a~~~g~~~v~~~~~~~~~~-~~~~~~g~~-~~~~~~~~~~~~l~~  229 (344)
T cd08284         153 LPTGYFGAKR-AQVRPGDTVAVIGCGPVGLCAVLSAQVLGAARVFAVDPVPERL-ERAAALGAE-PINFEDAEPVERVRE  229 (344)
T ss_pred             hHHHHhhhHh-cCCccCCEEEEECCcHHHHHHHHHHHHcCCceEEEEcCCHHHH-HHHHHhCCe-EEecCCcCHHHHHHH
Confidence            9999999976 667899999999889999999999999997 888886666555 455789975 3555443   33444


Q ss_pred             hc--CCccEEEEcCCCcccHHHHHhccccCCEEEEecCCCC-CcccChHHHHhCCcEEEecccCCHHHHHHHHHHHHcCC
Q 018067          244 AM--GTMDGIIDTVSAVHPLMPLIGLLKSQGKLVLVGAPEK-PLELPAFSLLMGRKIVGGSMIGGMKETQEMIDFAAKHN  320 (361)
Q Consensus       244 ~~--~g~d~vid~~g~~~~~~~~~~~l~~~G~~v~~g~~~~-~~~~~~~~~~~~~~~i~g~~~~~~~~~~~~~~ll~~~~  320 (361)
                      +.  .++|++||++|+...+..++++++++|+++.+|..+. .........+.+++++.+......+.++.+++++.+++
T Consensus       230 ~~~~~~~dvvid~~~~~~~~~~~~~~l~~~g~~v~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  309 (344)
T cd08284         230 ATEGRGADVVLEAVGGAAALDLAFDLVRPGGVISSVGVHTAEEFPFPGLDAYNKNLTLRFGRCPVRSLFPELLPLLESGR  309 (344)
T ss_pred             HhCCCCCCEEEECCCCHHHHHHHHHhcccCCEEEEECcCCCCCccccHHHHhhcCcEEEEecCCcchhHHHHHHHHHcCC
Confidence            43  3799999999986668999999999999999997652 33444555667888887665556678999999999999


Q ss_pred             Cce---eEEEEecccHHHHHHHHHcCCCceEEEEE
Q 018067          321 IRA---DIEVIPADYVNTALERLAKADVRYRFVID  352 (361)
Q Consensus       321 ~~~---~~~~~~l~~~~~a~~~~~~~~~~gkvvi~  352 (361)
                      +++   ..+++++++++++++.+.+++. +|+|+.
T Consensus       310 i~~~~~~~~~~~~~~~~~a~~~~~~~~~-~k~Vi~  343 (344)
T cd08284         310 LDLEFLIDHRMPLEEAPEAYRLFDKRKV-LKVVLD  343 (344)
T ss_pred             CChHHhEeeeecHHHHHHHHHHHhcCCc-eEEEec
Confidence            875   3388999999999999998887 999975

Glutathione-dependent formaldehyde dehydrogenases (FDHs) are members of the zinc-dependent/medium chain alcohol dehydrogenase family. Formaldehyde dehydrogenase (FDH) is a member of the zinc-dependent/medium chain alcohol dehydrogenase family. FDH converts formaldehyde and NAD to formate and NADH. The initial step in this process the spontaneous formation of a S-(hydroxymethyl)glutathione adduct from formaldehyde and glutathione, followed by FDH-mediated oxidation (and detoxification) of the adduct to S-formylglutathione. These tetrameric FDHs have a catalytic zinc that resides between the catalytic and NAD(H)binding domains and a structural zinc in a lobe of the catalytic domain. The medium chain alcohol dehydrogenase family (MDR) has a NAD(P)(H)-binding domain in a Rossmann fold of a beta-alpha form. The N-terminal region typically has an all-beta catalytic domain. These proteins typical

>PLN02702 L-idonate 5-dehydrogenase

Probab=100.00  E-value=1.2e-39  Score=306.64  Aligned_cols=321  Identities=23%  Similarity=0.342  Sum_probs=255.0

Q ss_pred             CCCCccceeeccCCCCCCeEEEEEeeeccCcchHHhHhcCCC---CCCCCCcccccccEEEEEeCCCCCCCCCCCEEEec
Q 018067           21 TSGVLSPFHFSRRATGEKDVTFKVTHCGICHSDLHMIKNEWG---NTIYPIVPGHEIVGVVTEVGSKVSKFKVGDKVGVG   97 (361)
Q Consensus        21 ~~~~l~~~~~~~p~~~~~evlV~v~~~~i~~~D~~~~~g~~~---~~~~p~~lG~e~~G~Vv~vG~~v~~~~~GdrV~~~   97 (361)
                      ++..+++++++.|.+.++||+||++++++|++|++.+.+...   ...+|.++|||++|+|+++|+++++|++||+|++.
T Consensus        25 ~~~~l~~~~~~~p~~~~~ev~Ikv~~~~i~~~d~~~~~g~~~~~~~~~~p~~~G~e~~G~V~~vG~~v~~~~~Gd~V~~~  104 (364)
T PLN02702         25 GVNTLKIQPFKLPPLGPHDVRVRMKAVGICGSDVHYLKTMRCADFVVKEPMVIGHECAGIIEEVGSEVKHLVVGDRVALE  104 (364)
T ss_pred             cCCceEEEeccCCCCCCCeEEEEEEEEEEchhhhHHHcCCCCccccCCCCcccccceeEEEEEECCCCCCCCCCCEEEEc
Confidence            456788888888999999999999999999999998876321   11357789999999999999999999999999877


Q ss_pred             cccCCCCCCcccccCCCCCCcchhcccccccCCCCcCCCcceeEEeecCCceEECCCCCCcccccccchhhhhhhhHhhh
Q 018067           98 CMVGSCRSCDSCAIDLENYCPKVIMTYANKYHDGTITYGGYSDIMVADEHFVVRIPEGTPLDATAPLLCAGITVYSPLRF  177 (361)
Q Consensus        98 ~~~~~c~~c~~c~~~~~~~c~~~~~~~~~~~~~~~~~~g~~a~~v~v~~~~~~~ip~~~~~~~aa~l~~~~~ta~~~l~~  177 (361)
                      +.. +|++|.+|.+|..+.|++..+.  +    .....|+|++|+.++...++++|+++++.+++.. ..+.++|+++ .
T Consensus       105 ~~~-~~~~c~~c~~g~~~~c~~~~~~--~----~~~~~g~~~~y~~v~~~~~~~~P~~l~~~~aa~~-~~~~~a~~~~-~  175 (364)
T PLN02702        105 PGI-SCWRCNLCKEGRYNLCPEMKFF--A----TPPVHGSLANQVVHPADLCFKLPENVSLEEGAMC-EPLSVGVHAC-R  175 (364)
T ss_pred             CCC-CCCCCcchhCcCcccCCCcccc--C----CCCCCCcccceEEcchHHeEECCCCCCHHHHhhh-hHHHHHHHHH-H
Confidence            665 8999999999999999863211  1    1124799999999999999999999999988752 2344577777 4


Q ss_pred             cCCCCCCCEEEEEcCChHHHHHHHHHHHcCCe-EEEEeCCchhHHHHHHHcCCCEEecCC--CH---HHHHHh---c-CC
Q 018067          178 YGLDKPGMHVGVVGLGGLGHVAVKFAKAMGVK-VTVISTSPSKKSEAIERLGADSFLVSR--DQ---DEMQAA---M-GT  247 (361)
Q Consensus       178 ~~~~~~g~~vlV~Gag~vG~~a~~la~~~g~~-vi~~~~~~~~~~~~~~~~g~~~vv~~~--~~---~~~~~~---~-~g  247 (361)
                      ...+.+|++|+|+|+|++|++++++|+.+|++ +++++++ +.+.++++++|++.++++.  ..   +.+..+   . ++
T Consensus       176 ~~~~~~g~~vlI~g~g~vG~~~~~~a~~~G~~~v~~~~~~-~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~  254 (364)
T PLN02702        176 RANIGPETNVLVMGAGPIGLVTMLAARAFGAPRIVIVDVD-DERLSVAKQLGADEIVLVSTNIEDVESEVEEIQKAMGGG  254 (364)
T ss_pred             hcCCCCCCEEEEECCCHHHHHHHHHHHHcCCCEEEEECCC-HHHHHHHHHhCCCEEEecCcccccHHHHHHHHhhhcCCC
Confidence            56688999999999999999999999999996 4555444 4445566889998776543  22   222222   2 37


Q ss_pred             ccEEEEcCCCcccHHHHHhccccCCEEEEecCCCCCcccChHHHHhCCcEEEecccCCHHHHHHHHHHHHcCCCc--eeE
Q 018067          248 MDGIIDTVSAVHPLMPLIGLLKSQGKLVLVGAPEKPLELPAFSLLMGRKIVGGSMIGGMKETQEMIDFAAKHNIR--ADI  325 (361)
Q Consensus       248 ~d~vid~~g~~~~~~~~~~~l~~~G~~v~~g~~~~~~~~~~~~~~~~~~~i~g~~~~~~~~~~~~~~ll~~~~~~--~~~  325 (361)
                      +|++||++|+...+..++++++++|+++.+|.......+.......+++++.+++.. ...++.++++++++++.  +.+
T Consensus       255 ~d~vid~~g~~~~~~~~~~~l~~~G~~v~~g~~~~~~~~~~~~~~~~~~~i~~~~~~-~~~~~~~~~~~~~~~l~~~~~~  333 (364)
T PLN02702        255 IDVSFDCVGFNKTMSTALEATRAGGKVCLVGMGHNEMTVPLTPAAAREVDVVGVFRY-RNTWPLCLEFLRSGKIDVKPLI  333 (364)
T ss_pred             CCEEEECCCCHHHHHHHHHHHhcCCEEEEEccCCCCCcccHHHHHhCccEEEEeccC-hHHHHHHHHHHHcCCCCchHhe
Confidence            999999999766689999999999999999965433444556677899999997754 35788999999999885  223


Q ss_pred             -EEEec--ccHHHHHHHHHcCCCceEEEEE
Q 018067          326 -EVIPA--DYVNTALERLAKADVRYRFVID  352 (361)
Q Consensus       326 -~~~~l--~~~~~a~~~~~~~~~~gkvvi~  352 (361)
                       ++|++  +++++|++.+.+++..+|+++.
T Consensus       334 ~~~~~l~~~~~~~a~~~~~~~~~~~kvv~~  363 (364)
T PLN02702        334 THRFGFSQKEVEEAFETSARGGNAIKVMFN  363 (364)
T ss_pred             EEEeccChHHHHHHHHHHhcCCCceEEEEe
Confidence             77555  7999999999988877999985

>TIGR03366 HpnZ_proposed putative phosphonate catabolism associated alcohol dehydrogenase

Probab=100.00  E-value=1.2e-40  Score=302.00  Aligned_cols=262  Identities=24%  Similarity=0.324  Sum_probs=216.1

Q ss_pred             cccccccEEEEEeCCCCC------CCCCCCEEEeccccCCCCCCcccccCCCCCCcchhcccccccCCCCcCCCcceeEE
Q 018067           69 VPGHEIVGVVTEVGSKVS------KFKVGDKVGVGCMVGSCRSCDSCAIDLENYCPKVIMTYANKYHDGTITYGGYSDIM  142 (361)
Q Consensus        69 ~lG~e~~G~Vv~vG~~v~------~~~~GdrV~~~~~~~~c~~c~~c~~~~~~~c~~~~~~~~~~~~~~~~~~g~~a~~v  142 (361)
                      ++|||++|+|+++|++|+      +|++||||++.+.. +|++|.+|+.++++.|.+..+.-......+...+|+|+||+
T Consensus         1 v~GHE~~G~V~~vG~~v~~~~~~~~~~~GdrV~~~~~~-~cg~C~~C~~g~~~~C~~~~~~g~~~~~~~~~~~G~~aey~   79 (280)
T TIGR03366         1 VLGHEIVGEVVALRGGFTPADDGVPLRLGQRVVWSVTV-PCGRCFRCRRGLPQKCDSLRKYGHEALDSGWPLSGGYAEHC   79 (280)
T ss_pred             CCCcccceEEEEeCCCccccccCCCCCCCCEEEEcCCC-CCCCChhhhCcCcccCCChhhcCcccccCCccccccceeeE
Confidence            589999999999999999      89999999887765 89999999999999999864320000011223579999999


Q ss_pred             eecCC-ceEECCCCCCcccccccchhhhhhhhHhhhcCCCCCCCEEEEEcCChHHHHHHHHHHHcCCe-EEEEeCCchhH
Q 018067          143 VADEH-FVVRIPEGTPLDATAPLLCAGITVYSPLRFYGLDKPGMHVGVVGLGGLGHVAVKFAKAMGVK-VTVISTSPSKK  220 (361)
Q Consensus       143 ~v~~~-~~~~ip~~~~~~~aa~l~~~~~ta~~~l~~~~~~~~g~~vlV~Gag~vG~~a~~la~~~g~~-vi~~~~~~~~~  220 (361)
                      .++++ +++++|+++++++++.+++.+.|+|+++++.. ..+|++|||+|+|++|++++|+|+++|++ |+++++++++ 
T Consensus        80 ~v~~~~~~~~lP~~~~~~~aa~l~~~~~ta~~al~~~~-~~~g~~VlV~G~G~vG~~~~~~ak~~G~~~Vi~~~~~~~r-  157 (280)
T TIGR03366        80 HLPAGTAIVPVPDDLPDAVAAPAGCATATVMAALEAAG-DLKGRRVLVVGAGMLGLTAAAAAAAAGAARVVAADPSPDR-  157 (280)
T ss_pred             EecCCCcEEECCCCCCHHHhhHhhhHHHHHHHHHHhcc-CCCCCEEEEECCCHHHHHHHHHHHHcCCCEEEEECCCHHH-
Confidence            99997 79999999999999999999999999998765 46999999999999999999999999996 7777655554 


Q ss_pred             HHHHHHcCCCEEecCCCH-HHHHHhcC--CccEEEEcCCCcccHHHHHhccccCCEEEEecCCC--CCcccChHHHHhCC
Q 018067          221 SEAIERLGADSFLVSRDQ-DEMQAAMG--TMDGIIDTVSAVHPLMPLIGLLKSQGKLVLVGAPE--KPLELPAFSLLMGR  295 (361)
Q Consensus       221 ~~~~~~~g~~~vv~~~~~-~~~~~~~~--g~d~vid~~g~~~~~~~~~~~l~~~G~~v~~g~~~--~~~~~~~~~~~~~~  295 (361)
                      .++++++|++.++++.+. +.+.+++.  ++|++||++|++.++..++++++++|+++.+|...  ....++...++.|+
T Consensus       158 ~~~a~~~Ga~~~i~~~~~~~~~~~~~~~~g~d~vid~~G~~~~~~~~~~~l~~~G~iv~~G~~~~~~~~~i~~~~~~~~~  237 (280)
T TIGR03366       158 RELALSFGATALAEPEVLAERQGGLQNGRGVDVALEFSGATAAVRACLESLDVGGTAVLAGSVFPGGPVALDPEQVVRRW  237 (280)
T ss_pred             HHHHHHcCCcEecCchhhHHHHHHHhCCCCCCEEEECCCChHHHHHHHHHhcCCCEEEEeccCCCCCceeeCHHHHHhCC
Confidence            566689999988876553 33444443  79999999998877899999999999999999753  34577788889999


Q ss_pred             cEEEecccCCHHHHHHHHHHHHcC--CCc--eeE-EEEecccH
Q 018067          296 KIVGGSMIGGMKETQEMIDFAAKH--NIR--ADI-EVIPADYV  333 (361)
Q Consensus       296 ~~i~g~~~~~~~~~~~~~~ll~~~--~~~--~~~-~~~~l~~~  333 (361)
                      ++|.|+...+.++++++++++.++  +++  ..+ |+|||+|+
T Consensus       238 ~~i~g~~~~~~~~~~~~~~~l~~~~~~~~~~~~it~~~~l~~~  280 (280)
T TIGR03366       238 LTIRGVHNYEPRHLDQAVRFLAANGQRFPFEELVGKPFPLADV  280 (280)
T ss_pred             cEEEecCCCCHHHHHHHHHHHHhhCCCCCHHHHhhcccccccC
Confidence            999999988888999999999985  444  233 88999863

This clade of zinc-binding alcohol dehydrogenases (members of pfam00107) are repeatedly associated with genes proposed to be involved with the catabolism of phosphonate compounds.

>cd08242 MDR_like Medium chain dehydrogenases/reductase (MDR)/zinc-dependent alcohol dehydrogenase-like family

Probab=100.00  E-value=8.1e-40  Score=302.36  Aligned_cols=315  Identities=22%  Similarity=0.310  Sum_probs=259.3

Q ss_pred             cceeeeeecCCCCCccceeeccCCCCCCeEEEEEeeeccCcchHHhHhcCCCCCCCCCcccccccEEEEEeCCCCCCCCC
Q 018067           11 KNAFGWAAKDTSGVLSPFHFSRRATGEKDVTFKVTHCGICHSDLHMIKNEWGNTIYPIVPGHEIVGVVTEVGSKVSKFKV   90 (361)
Q Consensus        11 ~~~~~~~~~~~~~~l~~~~~~~p~~~~~evlV~v~~~~i~~~D~~~~~g~~~~~~~p~~lG~e~~G~Vv~vG~~v~~~~~   90 (361)
                      |+++.+.   .++.+++.+++.|+++++||+||++++++|++|+....|.++   +|.++|||++|+|+++|++   +++
T Consensus         1 ~~a~~~~---~~~~~~~~~~~~p~~~~~~vlV~v~a~~i~~~d~~~~~g~~~---~~~~~G~e~~G~Vv~~G~~---~~~   71 (319)
T cd08242           1 MKALVLD---GGLDLRVEDLPKPEPPPGEALVRVLLAGICNTDLEIYKGYYP---FPGVPGHEFVGIVEEGPEA---ELV   71 (319)
T ss_pred             CeeEEEe---CCCcEEEEECCCCCCCCCeEEEEEEEEEEccccHHHHcCCCC---CCCccCceEEEEEEEeCCC---CCC
Confidence            4566664   355788999999999999999999999999999999888654   4778999999999999987   789


Q ss_pred             CCEEEeccccCCCCCCcccccCCCCCCcchhcccccccCCCC-cCCCcceeEEeecCCceEECCCCCCcccccccchhhh
Q 018067           91 GDKVGVGCMVGSCRSCDSCAIDLENYCPKVIMTYANKYHDGT-ITYGGYSDIMVADEHFVVRIPEGTPLDATAPLLCAGI  169 (361)
Q Consensus        91 GdrV~~~~~~~~c~~c~~c~~~~~~~c~~~~~~~~~~~~~~~-~~~g~~a~~v~v~~~~~~~ip~~~~~~~aa~l~~~~~  169 (361)
                      ||||...+.. +|+.|.+|.++.++.|......       +. ...|+|++|+.++.++++++|+++++++++.+ ....
T Consensus        72 G~~V~~~~~~-~~~~~~~~~~~~~~~~~~~~~~-------~~~~~~g~~~~~~~v~~~~~~~lP~~~~~~~aa~~-~~~~  142 (319)
T cd08242          72 GKRVVGEINI-ACGRCEYCRRGLYTHCPNRTVL-------GIVDRDGAFAEYLTLPLENLHVVPDLVPDEQAVFA-EPLA  142 (319)
T ss_pred             CCeEEECCCc-CCCCChhhhCcCcccCCCCccc-------CccCCCCceEEEEEechHHeEECcCCCCHHHhhhh-hHHH
Confidence            9999776655 7999999999999999875321       11 24789999999999999999999999888754 3445


Q ss_pred             hhhhHhhhcCCCCCCCEEEEEcCChHHHHHHHHHHHcCCeEEEEeCCchhHHHHHHHcCCCEEecCCCHHHHHHhcCCcc
Q 018067          170 TVYSPLRFYGLDKPGMHVGVVGLGGLGHVAVKFAKAMGVKVTVISTSPSKKSEAIERLGADSFLVSRDQDEMQAAMGTMD  249 (361)
Q Consensus       170 ta~~~l~~~~~~~~g~~vlV~Gag~vG~~a~~la~~~g~~vi~~~~~~~~~~~~~~~~g~~~vv~~~~~~~~~~~~~g~d  249 (361)
                      ++|..+ +...+++|++|||+|+|.+|++++|+|+.+|++|++++++++++..+ +++|++.++++++.    .-..++|
T Consensus       143 ~~~~~~-~~~~~~~g~~vlV~g~g~vg~~~~q~a~~~G~~vi~~~~~~~~~~~~-~~~g~~~~~~~~~~----~~~~~~d  216 (319)
T cd08242         143 AALEIL-EQVPITPGDKVAVLGDGKLGLLIAQVLALTGPDVVLVGRHSEKLALA-RRLGVETVLPDEAE----SEGGGFD  216 (319)
T ss_pred             HHHHHH-HhcCCCCCCEEEEECCCHHHHHHHHHHHHcCCeEEEEcCCHHHHHHH-HHcCCcEEeCcccc----ccCCCCC
Confidence            666655 45668999999999989999999999999999999988887776666 66999887776542    1124799


Q ss_pred             EEEEcCCCcccHHHHHhccccCCEEEEecCCCCCcccChHHHHhCCcEEEecccCCHHHHHHHHHHHHcCCCc--eeE-E
Q 018067          250 GIIDTVSAVHPLMPLIGLLKSQGKLVLVGAPEKPLELPAFSLLMGRKIVGGSMIGGMKETQEMIDFAAKHNIR--ADI-E  326 (361)
Q Consensus       250 ~vid~~g~~~~~~~~~~~l~~~G~~v~~g~~~~~~~~~~~~~~~~~~~i~g~~~~~~~~~~~~~~ll~~~~~~--~~~-~  326 (361)
                      ++||++|+...+..++++++++|+++..+.......++...+..++.++.++....   ++++++++.+++++  +.+ +
T Consensus       217 ~vid~~g~~~~~~~~~~~l~~~g~~v~~~~~~~~~~~~~~~~~~~~~~i~~~~~~~---~~~~~~~~~~~~l~~~~~~~~  293 (319)
T cd08242         217 VVVEATGSPSGLELALRLVRPRGTVVLKSTYAGPASFDLTKAVVNEITLVGSRCGP---FAPALRLLRKGLVDVDPLITA  293 (319)
T ss_pred             EEEECCCChHHHHHHHHHhhcCCEEEEEcccCCCCccCHHHheecceEEEEEeccc---HHHHHHHHHcCCCChhhceEE
Confidence            99999998666889999999999999987655555666667778999999886544   77889999999984  334 8


Q ss_pred             EEecccHHHHHHHHHcCCCceEEEEEe
Q 018067          327 VIPADYVNTALERLAKADVRYRFVIDV  353 (361)
Q Consensus       327 ~~~l~~~~~a~~~~~~~~~~gkvvi~~  353 (361)
                      .|+++++++||+.+.++. .+|++|.+
T Consensus       294 ~~~l~~~~~a~~~~~~~~-~~k~vi~~  319 (319)
T cd08242         294 VYPLEEALEAFERAAEPG-ALKVLLRP  319 (319)
T ss_pred             EEeHHHHHHHHHHHhcCC-ceEEEeCC
Confidence            999999999999999776 48999863

This group contains members identified as related to zinc-dependent alcohol dehydrogenase and other members of the MDR family, including threonine dehydrogenase. The medium chain dehydrogenases/reductase (MDR)/zinc-dependent alcohol dehydrogenase-like family, which contains the zinc-dependent alcohol dehydrogenase (ADH-Zn) and related proteins, is a diverse group of proteins related to the first identified member, class I mammalian ADH. MDRs display a broad range of activities and are distinguished from the smaller short chain dehydrogenases (~ 250 amino acids vs. the ~ 350 amino acids of the MDR). The MDR proteins have 2 domains: a C-terminal NAD(P) binding-Rossmann fold domain of a beta-alpha form and an N-terminal catalytic domain with distant homology to GroES. The MDR group includes various activities, including the founding alcohol dehydrogenase (ADH), quinone reducta

>cd08262 Zn_ADH8 Alcohol dehydrogenases of the MDR family

Probab=100.00  E-value=1.5e-39  Score=303.33  Aligned_cols=318  Identities=24%  Similarity=0.287  Sum_probs=255.5

Q ss_pred             cceeeeeecCCCCCccceeeccCCCCCCeEEEEEeeeccCcchHHhHhcCCC-----------CCCCCCcccccccEEEE
Q 018067           11 KNAFGWAAKDTSGVLSPFHFSRRATGEKDVTFKVTHCGICHSDLHMIKNEWG-----------NTIYPIVPGHEIVGVVT   79 (361)
Q Consensus        11 ~~~~~~~~~~~~~~l~~~~~~~p~~~~~evlV~v~~~~i~~~D~~~~~g~~~-----------~~~~p~~lG~e~~G~Vv   79 (361)
                      |+++.+..   + .+++++++.|+++++||+|++.++++|+.|++...|...           ...+|.++|+|++|+|+
T Consensus         1 m~a~~~~~---~-~~~~~~~~~p~~~~~~v~V~v~~~~~~~~d~~~~~g~~~~~~~~~~~~~~~~~~~~~~g~e~~G~V~   76 (341)
T cd08262           1 MRAAVFRD---G-PLVVRDVPDPEPGPGQVLVKVLACGICGSDLHATAHPEAMVDDAGGPSLMDLGADIVLGHEFCGEVV   76 (341)
T ss_pred             CceEEEeC---C-ceEEEecCCCCCCCCeEEEEEEEEEEcccchHHHcCCCcccccccccccccCCCCcccccceeEEEE
Confidence            45555532   2 688889999999999999999999999999998877321           12357789999999999


Q ss_pred             EeCCCCCC-CCCCCEEEeccccCCCCCCcccccCCCCCCcchhcccccccCCCCcCCCcceeEEeecCCceEECCCCCCc
Q 018067           80 EVGSKVSK-FKVGDKVGVGCMVGSCRSCDSCAIDLENYCPKVIMTYANKYHDGTITYGGYSDIMVADEHFVVRIPEGTPL  158 (361)
Q Consensus        80 ~vG~~v~~-~~~GdrV~~~~~~~~c~~c~~c~~~~~~~c~~~~~~~~~~~~~~~~~~g~~a~~v~v~~~~~~~ip~~~~~  158 (361)
                      ++|++++. |++||+|+..++ ..|+.|.+|..|..                 ....|+|++|+.++.+.++++|+++++
T Consensus        77 ~vG~~v~~~~~~Gd~V~~~~~-~~~~~~~~~~~~~~-----------------~~~~g~~~~~~~v~~~~~~~lP~~~s~  138 (341)
T cd08262          77 DYGPGTERKLKVGTRVTSLPL-LLCGQGASCGIGLS-----------------PEAPGGYAEYMLLSEALLLRVPDGLSM  138 (341)
T ss_pred             EeCCCCcCCCCCCCEEEecCC-cCCCCChhhhCCCC-----------------cCCCCceeeeEEechHHeEECCCCCCH
Confidence            99999987 999999987766 49999999943211                 135789999999999999999999999


Q ss_pred             ccccccchhhhhhhhHhhhcCCCCCCCEEEEEcCChHHHHHHHHHHHcCCeEEEEeCCchhHHHHHHHcCCCEEecCCCH
Q 018067          159 DATAPLLCAGITVYSPLRFYGLDKPGMHVGVVGLGGLGHVAVKFAKAMGVKVTVISTSPSKKSEAIERLGADSFLVSRDQ  238 (361)
Q Consensus       159 ~~aa~l~~~~~ta~~~l~~~~~~~~g~~vlV~Gag~vG~~a~~la~~~g~~vi~~~~~~~~~~~~~~~~g~~~vv~~~~~  238 (361)
                      ++++ ++..+.+||+++ ..+++++|++|||+|+|.+|++++|+|+.+|++++.+.+..+++..+++++|++++++++..
T Consensus       139 ~~a~-~~~~~~~a~~~~-~~~~~~~g~~VlI~g~g~vg~~~~~la~~~G~~~v~~~~~~~~~~~~~~~~g~~~~i~~~~~  216 (341)
T cd08262         139 EDAA-LTEPLAVGLHAV-RRARLTPGEVALVIGCGPIGLAVIAALKARGVGPIVASDFSPERRALALAMGADIVVDPAAD  216 (341)
T ss_pred             HHhh-hhhhHHHHHHHH-HhcCCCCCCEEEEECCCHHHHHHHHHHHHcCCcEEEEECCCHHHHHHHHHcCCcEEEcCCCc
Confidence            9876 667888999986 56778999999999889999999999999999755555544555566688999888887654


Q ss_pred             HH------HHHhc--CCccEEEEcCCCcccHHHHHhccccCCEEEEecCCCCCcccChHHHHhCCcEEEecccCCHHHHH
Q 018067          239 DE------MQAAM--GTMDGIIDTVSAVHPLMPLIGLLKSQGKLVLVGAPEKPLELPAFSLLMGRKIVGGSMIGGMKETQ  310 (361)
Q Consensus       239 ~~------~~~~~--~g~d~vid~~g~~~~~~~~~~~l~~~G~~v~~g~~~~~~~~~~~~~~~~~~~i~g~~~~~~~~~~  310 (361)
                      +.      +....  +++|++||++|+...+..++++++++|+++.+|.......+.......+++++.++.....++++
T Consensus       217 ~~~~~~~~~~~~~~~~~~d~vid~~g~~~~~~~~~~~l~~~g~~v~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  296 (341)
T cd08262         217 SPFAAWAAELARAGGPKPAVIFECVGAPGLIQQIIEGAPPGGRIVVVGVCMESDNIEPALAIRKELTLQFSLGYTPEEFA  296 (341)
T ss_pred             CHHHHHHHHHHHhCCCCCCEEEECCCCHHHHHHHHHHhccCCEEEEECCCCCCCccCHHHHhhcceEEEEEecccHHHHH
Confidence            21      12222  36999999999854488899999999999999976433333433335578888877666667899


Q ss_pred             HHHHHHHcCCCcee---EEEEecccHHHHHHHHHcCCCceEEEEE
Q 018067          311 EMIDFAAKHNIRAD---IEVIPADYVNTALERLAKADVRYRFVID  352 (361)
Q Consensus       311 ~~~~ll~~~~~~~~---~~~~~l~~~~~a~~~~~~~~~~gkvvi~  352 (361)
                      ++++++.++.+.+.   .+.+++++++++++.+.+++..||++++
T Consensus       297 ~~~~l~~~g~i~~~~~i~~~~~l~~~~~a~~~~~~~~~~~kvvv~  341 (341)
T cd08262         297 DALDALAEGKVDVAPMVTGTVGLDGVPDAFEALRDPEHHCKILVD  341 (341)
T ss_pred             HHHHHHHcCCCChHHheEEEeeHHHHHHHHHHHhcCCCceEEEeC
Confidence            99999999998753   3899999999999999999888999874

The medium chain dehydrogenases/reductase (MDR)/zinc-dependent alcohol dehydrogenase-like family, which contains the zinc-dependent alcohol dehydrogenase (ADH-Zn) and related proteins, is a diverse group of proteins related to the first identified member, class I mammalian ADH. MDRs display a broad range of activities and are distinguished from the smaller short chain dehydrogenases (~ 250 amino acids vs. the ~ 350 amino acids of the MDR). The MDR proteins have 2 domains: a C-terminal NAD(P)-binding Rossmann fold domain of a beta-alpha form and an N-terminal catalytic domain with distant homology to GroES. The MDR group contains a host of activities, including the founding alcohol dehydrogenase (ADH), quinone reductase, sorbitol dehydrogenase, formaldehyde dehydrogenase, butanediol DH, ketose reductase, cinnamyl reductase, and numerous others. The zinc-dependent alcohol dehydrogenases (ADHs) catalyze the NAD(P)(H)-dependent i

>cd08292 ETR_like_2 2-enoyl thioester reductase (ETR) like proteins, child 2

Probab=100.00  E-value=5.2e-40  Score=304.10  Aligned_cols=304  Identities=22%  Similarity=0.314  Sum_probs=255.9

Q ss_pred             cceeeeeecCCC-CCccceeeccCCCCCCeEEEEEeeeccCcchHHhHhcCCC-CCCCCCcccccccEEEEEeCCCCCCC
Q 018067           11 KNAFGWAAKDTS-GVLSPFHFSRRATGEKDVTFKVTHCGICHSDLHMIKNEWG-NTIYPIVPGHEIVGVVTEVGSKVSKF   88 (361)
Q Consensus        11 ~~~~~~~~~~~~-~~l~~~~~~~p~~~~~evlV~v~~~~i~~~D~~~~~g~~~-~~~~p~~lG~e~~G~Vv~vG~~v~~~   88 (361)
                      |+++.+..++.| ..+++.++|.|.+.++||+|||+++++|++|++.+.|.++ ....|.++|||++|+|+++|+++++|
T Consensus         1 m~a~~~~~~~~~~~~~~~~~~~~p~~~~~~v~i~v~~~~~~~~d~~~~~g~~~~~~~~p~~~G~e~~G~V~~~G~~v~~~   80 (324)
T cd08292           1 MRAAVHTQFGDPADVLEIGEVPKPTPGAGEVLVRTTLSPIHNHDLWTIRGTYGYKPELPAIGGSEAVGVVDAVGEGVKGL   80 (324)
T ss_pred             CeeEEEccCCChhHeEEEeecCCCCCCCCeEEEEEEEccCCHHHHHHhcCcCCCCCCCCCCCCcceEEEEEEeCCCCCCC
Confidence            567777654444 4588899999999999999999999999999999888654 23567899999999999999999999


Q ss_pred             CCCCEEEeccccCCCCCCcccccCCCCCCcchhcccccccCCCCcCCCcceeEEeecCCceEECCCCCCcccccccchhh
Q 018067           89 KVGDKVGVGCMVGSCRSCDSCAIDLENYCPKVIMTYANKYHDGTITYGGYSDIMVADEHFVVRIPEGTPLDATAPLLCAG  168 (361)
Q Consensus        89 ~~GdrV~~~~~~~~c~~c~~c~~~~~~~c~~~~~~~~~~~~~~~~~~g~~a~~v~v~~~~~~~ip~~~~~~~aa~l~~~~  168 (361)
                      ++||+|+..                                   ...|+|++|+.++.+.++++|+++++++++.+++.+
T Consensus        81 ~~Gd~V~~~-----------------------------------~~~g~~~~~~~~~~~~~~~ip~~~~~~~aa~~~~~~  125 (324)
T cd08292          81 QVGQRVAVA-----------------------------------PVHGTWAEYFVAPADGLVPLPDGISDEVAAQLIAMP  125 (324)
T ss_pred             CCCCEEEec-----------------------------------cCCCcceeEEEEchHHeEECCCCCCHHHhhhccccH
Confidence            999999742                                   236899999999999999999999999999999889


Q ss_pred             hhhhhHhhhcCCCCCCCEEEEEcC-ChHHHHHHHHHHHcCCeEEEEeCCchhHHHHHHHcCCCEEecCCCHHH---HHHh
Q 018067          169 ITVYSPLRFYGLDKPGMHVGVVGL-GGLGHVAVKFAKAMGVKVTVISTSPSKKSEAIERLGADSFLVSRDQDE---MQAA  244 (361)
Q Consensus       169 ~ta~~~l~~~~~~~~g~~vlV~Ga-g~vG~~a~~la~~~g~~vi~~~~~~~~~~~~~~~~g~~~vv~~~~~~~---~~~~  244 (361)
                      .++|+++.. ..+++|++|||+|+ |.+|++++|+|+.+|+++++++++++++..+ +++|+++++++++.+.   +..+
T Consensus       126 ~ta~~~~~~-~~~~~g~~vlI~g~~g~ig~~~~~~a~~~G~~v~~~~~~~~~~~~~-~~~g~~~~~~~~~~~~~~~i~~~  203 (324)
T cd08292         126 LSALMLLDF-LGVKPGQWLIQNAAGGAVGKLVAMLAAARGINVINLVRRDAGVAEL-RALGIGPVVSTEQPGWQDKVREA  203 (324)
T ss_pred             HHHHHHHHh-hCCCCCCEEEEcccccHHHHHHHHHHHHCCCeEEEEecCHHHHHHH-HhcCCCEEEcCCCchHHHHHHHH
Confidence            999998865 67899999999987 9999999999999999999999998887777 4589988888876543   3344


Q ss_pred             cC--CccEEEEcCCCcccHHHHHhccccCCEEEEecCCCC-CcccChHHHHhCCcEEEecccCC----------HHHHHH
Q 018067          245 MG--TMDGIIDTVSAVHPLMPLIGLLKSQGKLVLVGAPEK-PLELPAFSLLMGRKIVGGSMIGG----------MKETQE  311 (361)
Q Consensus       245 ~~--g~d~vid~~g~~~~~~~~~~~l~~~G~~v~~g~~~~-~~~~~~~~~~~~~~~i~g~~~~~----------~~~~~~  311 (361)
                      +.  ++|++||++|+.. ...++++++++|+++.+|.... ...++....+.++.++.++....          .+.+++
T Consensus       204 ~~~~~~d~v~d~~g~~~-~~~~~~~l~~~g~~v~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  282 (324)
T cd08292         204 AGGAPISVALDSVGGKL-AGELLSLLGEGGTLVSFGSMSGEPMQISSGDLIFKQATVRGFWGGRWSQEMSVEYRKRMIAE  282 (324)
T ss_pred             hCCCCCcEEEECCCChh-HHHHHHhhcCCcEEEEEecCCCCCCcCCHHHHhhCCCEEEEEEcHHhhhhcCHHHHHHHHHH
Confidence            43  7999999999975 8899999999999999987532 34556555667899988876532          246788


Q ss_pred             HHHHHHcCCCceeE-EEEecccHHHHHHHHHcCCCceEEEEE
Q 018067          312 MIDFAAKHNIRADI-EVIPADYVNTALERLAKADVRYRFVID  352 (361)
Q Consensus       312 ~~~ll~~~~~~~~~-~~~~l~~~~~a~~~~~~~~~~gkvvi~  352 (361)
                      +++++.++++++.+ +.|+++++++|++.+.+++..+|++++
T Consensus       283 ~~~l~~~g~i~~~~~~~~~~~~~~~a~~~~~~~~~~~kvvv~  324 (324)
T cd08292         283 LLTLALKGQLLLPVEAVFDLGDAAKAAAASMRPGRAGKVLLR  324 (324)
T ss_pred             HHHHHHCCCccCccccEecHHHHHHHHHHHHcCCCCceEEeC
Confidence            99999999998655 899999999999999888777998874

2-enoyl thioester reductase (ETR) like proteins. ETR catalyzes the NADPH-dependent conversion of trans-2-enoyl acyl carrier protein/coenzyme A (ACP/CoA) to acyl-(ACP/CoA) in fatty acid synthesis. 2-enoyl thioester reductase activity has been linked in Candida tropicalis as essential in maintaining mitiochondrial respiratory function. This ETR family is a part of the medium chain dehydrogenase/reductase family, but lack the zinc coordination sites characteristic of the 2-enoyl thioester reductase (ETR) like proteins. ETR catalyzes the NADPH-dependent dependent conversion of trans-2-enoyl acyl carrier protein/coenzyme A (ACP/CoA) to acyl-(ACP/CoA) in fatty acid synthesis. 2-enoyl thioester reductase activity has been linked in Candida tropicalis as essential in maintaining mitiochondrial respiratory function. This ETR family is a part of the medium chain dehydrogenase/reductase family, but lack the zinc coordina

>cd08295 double_bond_reductase_like Arabidopsis alkenal double bond reductase and leukotriene B4 12-hydroxydehydrogenase

Probab=100.00  E-value=3.4e-40  Score=307.26  Aligned_cols=293  Identities=20%  Similarity=0.204  Sum_probs=240.0

Q ss_pred             CCCccceeecc----CCCCCCeEEEEEeeeccCcchHHhHhcCCCC-CCCCCcccccc--cEEEEEeCCCCCCCCCCCEE
Q 018067           22 SGVLSPFHFSR----RATGEKDVTFKVTHCGICHSDLHMIKNEWGN-TIYPIVPGHEI--VGVVTEVGSKVSKFKVGDKV   94 (361)
Q Consensus        22 ~~~l~~~~~~~----p~~~~~evlV~v~~~~i~~~D~~~~~g~~~~-~~~p~~lG~e~--~G~Vv~vG~~v~~~~~GdrV   94 (361)
                      ++.|++.+.+.    |+|+++||||||++++||+.|++.+.|.... ..+|+++|++.  .|.+..+|+.+++|++||||
T Consensus        18 ~~~~~~~~~~~~~~~p~p~~~~vlv~v~~~~inp~d~~~~~g~~~~~~~~p~~~g~~~~g~~~~~~v~~~v~~~~vGd~V   97 (338)
T cd08295          18 ESDLELRTTKLTLKVPPGGSGDVLVKNLYLSCDPYMRGRMKGHDDSLYLPPFKPGEVITGYGVAKVVDSGNPDFKVGDLV   97 (338)
T ss_pred             ccceEEEEecCCcCCCCCCCCeEEEEEEEEeeCHHHHHhhccCCccccCCCcCCCCeEeccEEEEEEecCCCCCCCCCEE
Confidence            46788888777    8899999999999999999999998885432 35678899754  45666678888899999999


Q ss_pred             EeccccCCCCCCcccccCCCCCCcchhcccccccCCCCcCCCcceeEEeecC-CceEECC-CCCCcc-cccccchhhhhh
Q 018067           95 GVGCMVGSCRSCDSCAIDLENYCPKVIMTYANKYHDGTITYGGYSDIMVADE-HFVVRIP-EGTPLD-ATAPLLCAGITV  171 (361)
Q Consensus        95 ~~~~~~~~c~~c~~c~~~~~~~c~~~~~~~~~~~~~~~~~~g~~a~~v~v~~-~~~~~ip-~~~~~~-~aa~l~~~~~ta  171 (361)
                      +.                                      .|+|+||++++. ..++++| ++++++ +++.+++++.||
T Consensus        98 ~~--------------------------------------~g~~aey~~v~~~~~~~~lp~~~~~~~~~aa~l~~~~~tA  139 (338)
T cd08295          98 WG--------------------------------------FTGWEEYSLIPRGQDLRKIDHTDVPLSYYLGLLGMPGLTA  139 (338)
T ss_pred             Ee--------------------------------------cCCceeEEEecchhceeecCCCCCCHHHHHHhcccHHHHH
Confidence            62                                      357999999999 7999995 678887 789999999999


Q ss_pred             hhHhhhcCCCCCCCEEEEEcC-ChHHHHHHHHHHHcCCeEEEEeCCchhHHHHHHHcCCCEEecCCCH-H---HHHHhc-
Q 018067          172 YSPLRFYGLDKPGMHVGVVGL-GGLGHVAVKFAKAMGVKVTVISTSPSKKSEAIERLGADSFLVSRDQ-D---EMQAAM-  245 (361)
Q Consensus       172 ~~~l~~~~~~~~g~~vlV~Ga-g~vG~~a~~la~~~g~~vi~~~~~~~~~~~~~~~~g~~~vv~~~~~-~---~~~~~~-  245 (361)
                      |+++.+..++++|++|||+|+ |++|++++|+|+.+|++|+++++++++...+.+++|+++++++.+. +   .+.+.. 
T Consensus       140 ~~~l~~~~~~~~g~~VlI~Ga~G~vG~~aiqlAk~~G~~Vi~~~~~~~~~~~~~~~lGa~~vi~~~~~~~~~~~i~~~~~  219 (338)
T cd08295         140 YAGFYEVCKPKKGETVFVSAASGAVGQLVGQLAKLKGCYVVGSAGSDEKVDLLKNKLGFDDAFNYKEEPDLDAALKRYFP  219 (338)
T ss_pred             HHHHHHhcCCCCCCEEEEecCccHHHHHHHHHHHHcCCEEEEEeCCHHHHHHHHHhcCCceeEEcCCcccHHHHHHHhCC
Confidence            999988888999999999997 9999999999999999999988888776666433999999886542 2   233333 


Q ss_pred             CCccEEEEcCCCcccHHHHHhccccCCEEEEecCCCCC-c-----ccChHHHHhCCcEEEecccCCH-----HHHHHHHH
Q 018067          246 GTMDGIIDTVSAVHPLMPLIGLLKSQGKLVLVGAPEKP-L-----ELPAFSLLMGRKIVGGSMIGGM-----KETQEMID  314 (361)
Q Consensus       246 ~g~d~vid~~g~~~~~~~~~~~l~~~G~~v~~g~~~~~-~-----~~~~~~~~~~~~~i~g~~~~~~-----~~~~~~~~  314 (361)
                      .++|++||++|+.. +..++++++++|+++.+|..... .     ..+...++.+++++.++.....     +.++++++
T Consensus       220 ~gvd~v~d~~g~~~-~~~~~~~l~~~G~iv~~G~~~~~~~~~~~~~~~~~~~~~~~~~i~g~~~~~~~~~~~~~~~~~~~  298 (338)
T cd08295         220 NGIDIYFDNVGGKM-LDAVLLNMNLHGRIAACGMISQYNLEWPEGVRNLLNIIYKRVKIQGFLVGDYLHRYPEFLEEMSG  298 (338)
T ss_pred             CCcEEEEECCCHHH-HHHHHHHhccCcEEEEecccccCCCCCCCCccCHHHHhhccceeeEEEehhhHHHHHHHHHHHHH
Confidence            48999999999855 89999999999999999865432 1     1234556678888888654332     34778899


Q ss_pred             HHHcCCCceeE-EEEecccHHHHHHHHHcCCCceEEEEEe
Q 018067          315 FAAKHNIRADI-EVIPADYVNTALERLAKADVRYRFVIDV  353 (361)
Q Consensus       315 ll~~~~~~~~~-~~~~l~~~~~a~~~~~~~~~~gkvvi~~  353 (361)
                      ++.+|++++.+ ..|+++++++|++.+++++..||+|+.+
T Consensus       299 l~~~g~l~~~~~~~~~l~~~~~A~~~~~~~~~~GkvVl~~  338 (338)
T cd08295         299 YIKEGKLKYVEDIADGLESAPEAFVGLFTGSNIGKQVVKV  338 (338)
T ss_pred             HHHCCCeEceeecccCHHHHHHHHHHHhcCCCCceEEEEC
Confidence            99999998766 6799999999999999999889999864

This group includes proteins identified as the Arabidopsis alkenal double bond reductase and leukotriene B4 12-hydroxydehydrogenase. The Arabidopsis enzyme, a member of the medium chain dehydrogenase/reductase family, catalyzes the reduction of 7-8-double bond of phenylpropanal substrates as a plant defense mechanism. Prostaglandins and related eicosanoids (lipid mediators involved in host defense and inflamation) are metabolized by the oxidation of the 15(S)-hydroxyl group of the NAD+-dependent (type I 15-PGDH) 15-prostaglandin dehydrogenase (15-PGDH) followed by reduction by NADPH/NADH-dependent (type II 15-PGDH) delta-13 15-prostaglandin reductase (13-PGR) to 15-keto-13,14,-dihydroprostaglandins. 13-PGR is a bifunctional enzyme, since it also has leukotriene B(4) 12-hydroxydehydrogenase activity. Leukotriene B4 (LTB4) can be metabolized by LTB4 20-hydroxylase in

>cd08232 idonate-5-DH L-idonate 5-dehydrogenase

Probab=100.00  E-value=1.4e-39  Score=303.23  Aligned_cols=326  Identities=24%  Similarity=0.356  Sum_probs=264.0

Q ss_pred             CCCCCccceeeccCCCCCCeEEEEEeeeccCcchHHhHh-cCCC--CCCCCCcccccccEEEEEeCCCCCCCCCCCEEEe
Q 018067           20 DTSGVLSPFHFSRRATGEKDVTFKVTHCGICHSDLHMIK-NEWG--NTIYPIVPGHEIVGVVTEVGSKVSKFKVGDKVGV   96 (361)
Q Consensus        20 ~~~~~l~~~~~~~p~~~~~evlV~v~~~~i~~~D~~~~~-g~~~--~~~~p~~lG~e~~G~Vv~vG~~v~~~~~GdrV~~   96 (361)
                      .+++.+++++.+.|.++++||+||+.++++|++|++.++ +..+  ...+|.++|||++|+|+++|++++.|++||+|+.
T Consensus         4 ~~~~~~~~~~~~~p~l~~~~v~I~v~~~~i~~~d~~~~~~~~~~~~~~~~p~~~g~e~~G~v~~vG~~v~~~~~Gd~V~~   83 (339)
T cd08232           4 HAAGDLRVEERPAPEPGPGEVRVRVAAGGICGSDLHYYQHGGFGTVRLREPMVLGHEVSGVVEAVGPGVTGLAPGQRVAV   83 (339)
T ss_pred             ccCCceEEEEcCCCCCCCCEEEEEEEEEEECcccHHHHcCCCCCcccccCCeecCccceEEEEeeCCCCCcCCCCCEEEE
Confidence            356788899999999999999999999999999998764 3221  1235778999999999999999999999999977


Q ss_pred             ccccCCCCCCcccccCCCCCCcchhcccccccCCCCcCCCcceeEEeecCCceEECCCCCCcccccccchhhhhhhhHhh
Q 018067           97 GCMVGSCRSCDSCAIDLENYCPKVIMTYANKYHDGTITYGGYSDIMVADEHFVVRIPEGTPLDATAPLLCAGITVYSPLR  176 (361)
Q Consensus        97 ~~~~~~c~~c~~c~~~~~~~c~~~~~~~~~~~~~~~~~~g~~a~~v~v~~~~~~~ip~~~~~~~aa~l~~~~~ta~~~l~  176 (361)
                      .+. ++|++|.+|..|+.++|.+..+.... .. -....|+|++|+.++.+.++++|+++++++|+. ..++.++|+++.
T Consensus        84 ~~~-~~~~~~~~~~~g~~~~~~~~~~~~~~-~~-~~~~~g~~~~~v~v~~~~~~~iP~~~~~~~aa~-~~~~~~a~~~l~  159 (339)
T cd08232          84 NPS-RPCGTCDYCRAGRPNLCLNMRFLGSA-MR-FPHVQGGFREYLVVDASQCVPLPDGLSLRRAAL-AEPLAVALHAVN  159 (339)
T ss_pred             ccC-CcCCCChHHhCcCcccCccccceeec-cc-cCCCCCceeeEEEechHHeEECcCCCCHHHhhh-cchHHHHHHHHH
Confidence            654 48999999999999999985321000 00 012579999999999999999999999999875 577889999998


Q ss_pred             hcCCCCCCCEEEEEcCChHHHHHHHHHHHcCC-eEEEEeCCchhHHHHHHHcCCCEEecCCCHHHHHHhc---CCccEEE
Q 018067          177 FYGLDKPGMHVGVVGLGGLGHVAVKFAKAMGV-KVTVISTSPSKKSEAIERLGADSFLVSRDQDEMQAAM---GTMDGII  252 (361)
Q Consensus       177 ~~~~~~~g~~vlV~Gag~vG~~a~~la~~~g~-~vi~~~~~~~~~~~~~~~~g~~~vv~~~~~~~~~~~~---~g~d~vi  252 (361)
                      ..... ++++|||.|+|.+|++++|+|+.+|+ +++++++++++.. +++++|+++++++++.+ +....   +++|++|
T Consensus       160 ~~~~~-~~~~VLI~g~g~vG~~~~~lak~~G~~~v~~~~~s~~~~~-~~~~~g~~~vi~~~~~~-~~~~~~~~~~vd~vl  236 (339)
T cd08232         160 RAGDL-AGKRVLVTGAGPIGALVVAAARRAGAAEIVATDLADAPLA-VARAMGADETVNLARDP-LAAYAADKGDFDVVF  236 (339)
T ss_pred             hcCCC-CCCEEEEECCCHHHHHHHHHHHHcCCcEEEEECCCHHHHH-HHHHcCCCEEEcCCchh-hhhhhccCCCccEEE
Confidence            87766 99999998889999999999999999 7888877766655 66889999988887654 22222   3699999


Q ss_pred             EcCCCcccHHHHHhccccCCEEEEecCCCCCcccChHHHHhCCcEEEecccCCHHHHHHHHHHHHcCCCcee--E-EEEe
Q 018067          253 DTVSAVHPLMPLIGLLKSQGKLVLVGAPEKPLELPAFSLLMGRKIVGGSMIGGMKETQEMIDFAAKHNIRAD--I-EVIP  329 (361)
Q Consensus       253 d~~g~~~~~~~~~~~l~~~G~~v~~g~~~~~~~~~~~~~~~~~~~i~g~~~~~~~~~~~~~~ll~~~~~~~~--~-~~~~  329 (361)
                      |++|+...+...+++|+++|+++.+|..+.....+...++.+++++.+... ..+.++++++++.++++++.  + ++++
T Consensus       237 d~~g~~~~~~~~~~~L~~~G~~v~~g~~~~~~~~~~~~~~~~~~~~~~~~~-~~~~~~~~~~~~~~~~i~~~~~~~~~~~  315 (339)
T cd08232         237 EASGAPAALASALRVVRPGGTVVQVGMLGGPVPLPLNALVAKELDLRGSFR-FDDEFAEAVRLLAAGRIDVRPLITAVFP  315 (339)
T ss_pred             ECCCCHHHHHHHHHHHhcCCEEEEEecCCCCccCcHHHHhhcceEEEEEec-CHHHHHHHHHHHHcCCCCchhheeEEec
Confidence            999975558899999999999999986543344445555668888887764 34578899999999988642  3 7899


Q ss_pred             cccHHHHHHHHHcCCCceEEEEEe
Q 018067          330 ADYVNTALERLAKADVRYRFVIDV  353 (361)
Q Consensus       330 l~~~~~a~~~~~~~~~~gkvvi~~  353 (361)
                      ++++++|++.+.+++..||+|+.+
T Consensus       316 ~~~~~~a~~~~~~~~~~gkvvv~~  339 (339)
T cd08232         316 LEEAAEAFALAADRTRSVKVQLSF  339 (339)
T ss_pred             HHHHHHHHHHHHhCCCceeEEEeC
Confidence            999999999999888789999864

L-idonate 5-dehydrogenase (L-ido 5-DH ) catalyzes the conversion of L-lodonate to 5-ketogluconate in the metabolism of L-Idonate to 6-P-gluconate. In E. coli, this GntII pathway is a subsidiary pathway to the canonical GntI system, which also phosphorylates and transports gluconate. L-ido 5-DH is found in an operon with a regulator indR, transporter idnT, 5-keto-D-gluconate 5-reductase, and Gnt kinase. L-ido 5-DH is a zinc-dependent alcohol dehydrogenase-like protein. The alcohol dehydrogenase ADH-like family of proteins is a diverse group of proteins related to the first identified member, class I mammalian ADH. This group is also called the medium chain dehydrogenases/reductase family (MDR) which displays a broad range of activities and are distinguished from the smaller short chain dehydrogenases(~ 250 amino acids vs. the ~ 350 amino acids of the MDR). The MDR proteins have 2 domains: a C-terminal NAD(P) binding-Rossmann fold domai

>cd08235 iditol_2_DH_like L-iditol 2-dehydrogenase

Probab=100.00  E-value=1.9e-39  Score=302.85  Aligned_cols=326  Identities=25%  Similarity=0.372  Sum_probs=272.5

Q ss_pred             cceeeeeecCCCCCccceeeccCCCCCCeEEEEEeeeccCcchHHhHhcCCCCCCCCCcccccccEEEEEeCCCCCCCCC
Q 018067           11 KNAFGWAAKDTSGVLSPFHFSRRATGEKDVTFKVTHCGICHSDLHMIKNEWGNTIYPIVPGHEIVGVVTEVGSKVSKFKV   90 (361)
Q Consensus        11 ~~~~~~~~~~~~~~l~~~~~~~p~~~~~evlV~v~~~~i~~~D~~~~~g~~~~~~~p~~lG~e~~G~Vv~vG~~v~~~~~   90 (361)
                      |+++.++.   ++.+.+++.+.|++.+++|+||++++++|+.|+....|..+...+|.++|+|++|+|+++|++++.|++
T Consensus         1 ~~~~~~~~---~~~~~~~~~~~~~l~~~~v~i~v~~~~l~~~d~~~~~g~~~~~~~~~~~g~~~~G~V~~~G~~v~~~~~   77 (343)
T cd08235           1 MKAAVLHG---PNDVRLEEVPVPEPGPGEVLVKVRACGICGTDVKKIRGGHTDLKPPRILGHEIAGEIVEVGDGVTGFKV   77 (343)
T ss_pred             CeEEEEec---CCceEEEEccCCCCCCCeEEEEEEEeeeccccHHHHcCCCccCCCCcccccceEEEEEeeCCCCCCCCC
Confidence            45665543   456888899999999999999999999999999988876543345779999999999999999999999


Q ss_pred             CCEEEeccccCCCCCCcccccCCCCCCcchhcccccccCCCCcCCCcceeEEeecCCc-----eEECCCCCCcccccccc
Q 018067           91 GDKVGVGCMVGSCRSCDSCAIDLENYCPKVIMTYANKYHDGTITYGGYSDIMVADEHF-----VVRIPEGTPLDATAPLL  165 (361)
Q Consensus        91 GdrV~~~~~~~~c~~c~~c~~~~~~~c~~~~~~~~~~~~~~~~~~g~~a~~v~v~~~~-----~~~ip~~~~~~~aa~l~  165 (361)
                      ||+|+..+. .+|++|..|.++..++|++..+.       +....|+|++|+.++.++     ++++|+++++.+|+.+ 
T Consensus        78 Gd~V~~~~~-~~~~~~~~~~~~~~~~~~~~~~~-------~~~~~g~~~~~v~v~~~~~~~~~~~~lP~~~~~~~aa~~-  148 (343)
T cd08235          78 GDRVFVAPH-VPCGECHYCLRGNENMCPNYKKF-------GNLYDGGFAEYVRVPAWAVKRGGVLKLPDNVSFEEAALV-  148 (343)
T ss_pred             CCEEEEccC-CCCCCChHHHCcCcccCCCccee-------ccCCCCcceeeEEecccccccccEEECCCCCCHHHHHhh-
Confidence            999987654 48999999999999999876332       334679999999999998     9999999999998766 


Q ss_pred             hhhhhhhhHhhhcCCCCCCCEEEEEcCChHHHHHHHHHHHcCCe-EEEEeCCchhHHHHHHHcCCCEEecCCCHHH---H
Q 018067          166 CAGITVYSPLRFYGLDKPGMHVGVVGLGGLGHVAVKFAKAMGVK-VTVISTSPSKKSEAIERLGADSFLVSRDQDE---M  241 (361)
Q Consensus       166 ~~~~ta~~~l~~~~~~~~g~~vlV~Gag~vG~~a~~la~~~g~~-vi~~~~~~~~~~~~~~~~g~~~vv~~~~~~~---~  241 (361)
                      +.+.+||+++... .+++|++|+|+|+|.+|++++++|+..|++ ++++++++++...+ +++|.++++++++.+.   +
T Consensus       149 ~~~~~a~~~l~~~-~~~~g~~VlV~g~g~vg~~~~~la~~~g~~~v~~~~~s~~~~~~~-~~~g~~~~~~~~~~~~~~~i  226 (343)
T cd08235         149 EPLACCINAQRKA-GIKPGDTVLVIGAGPIGLLHAMLAKASGARKVIVSDLNEFRLEFA-KKLGADYTIDAAEEDLVEKV  226 (343)
T ss_pred             hHHHHHHHHHHhc-CCCCCCEEEEECCCHHHHHHHHHHHHcCCcEEEEECCCHHHHHHH-HHhCCcEEecCCccCHHHHH
Confidence            7888999999765 689999999998899999999999999998 88887877776666 6889988888876543   3


Q ss_pred             HHhcC--CccEEEEcCCCcccHHHHHhccccCCEEEEecCCCC--CcccChHHHHhCCcEEEecccCCHHHHHHHHHHHH
Q 018067          242 QAAMG--TMDGIIDTVSAVHPLMPLIGLLKSQGKLVLVGAPEK--PLELPAFSLLMGRKIVGGSMIGGMKETQEMIDFAA  317 (361)
Q Consensus       242 ~~~~~--g~d~vid~~g~~~~~~~~~~~l~~~G~~v~~g~~~~--~~~~~~~~~~~~~~~i~g~~~~~~~~~~~~~~ll~  317 (361)
                      ..+..  ++|++||++++...+...+++++++|+++.+|....  ...++...+..+++.+.++.....+.++.+++++.
T Consensus       227 ~~~~~~~~vd~vld~~~~~~~~~~~~~~l~~~g~~v~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~l~~  306 (343)
T cd08235         227 RELTDGRGADVVIVATGSPEAQAQALELVRKGGRILFFGGLPKGSTVNIDPNLIHYREITITGSYAASPEDYKEALELIA  306 (343)
T ss_pred             HHHhCCcCCCEEEECCCChHHHHHHHHHhhcCCEEEEEeccCCCCCcccCHHHHhhCceEEEEEecCChhhHHHHHHHHH
Confidence            33333  599999999976558899999999999999986543  23445566677889998887777788999999999


Q ss_pred             cCCCce--eE-EEEecccHHHHHHHHHcCCCceEEEE
Q 018067          318 KHNIRA--DI-EVIPADYVNTALERLAKADVRYRFVI  351 (361)
Q Consensus       318 ~~~~~~--~~-~~~~l~~~~~a~~~~~~~~~~gkvvi  351 (361)
                      ++.+.+  .+ .++++++++++++.+.+++ .+|+|+
T Consensus       307 ~~~l~~~~~~~~~~~~~~~~~a~~~~~~~~-~~k~vi  342 (343)
T cd08235         307 SGKIDVKDLITHRFPLEDIEEAFELAADGK-SLKIVI  342 (343)
T ss_pred             cCCCChHHheeeEeeHHHHHHHHHHHhCCC-cEEEEe
Confidence            999863  23 7899999999999999999 899986

Putative L-iditol 2-dehydrogenase based on annotation of some members in this subgroup. L-iditol 2-dehydrogenase catalyzes the NAD+-dependent conversion of L-iditol to L-sorbose in fructose and mannose metabolism. This enzyme is related to sorbitol dehydrogenase, alcohol dehydrogenase, and other medium chain dehydrogenase/reductases. The zinc-dependent alcohol dehydrogenase (ADH-Zn)-like family of proteins is a diverse group of proteins related to the first identified member, class I mammalian ADH. This group is also called the medium chain dehydrogenases/reductase family (MDR) to highlight its broad range of activities and to distinguish from the smaller short chain dehydrogenases (~ 250 amino acids vs. the ~ 350 amino acids of the MDR). The MDR proteins have 2 domains: a C-terminal NAD(P) binding-Rossmann fold domain of a beta-alpha form and an N-terminal GroES-like catalytic domain. The MDR group contains a host of activities, i

>cd08274 MDR9 Medium chain dehydrogenases/reductase (MDR)/zinc-dependent alcohol dehydrogenase-like family

Probab=100.00  E-value=1.2e-39  Score=305.08  Aligned_cols=323  Identities=21%  Similarity=0.277  Sum_probs=261.8

Q ss_pred             cceeeeeecCCCCCcccee-eccCCCCCCeEEEEEeeeccCcchHHhHhcCCC--------------------CCCCCCc
Q 018067           11 KNAFGWAAKDTSGVLSPFH-FSRRATGEKDVTFKVTHCGICHSDLHMIKNEWG--------------------NTIYPIV   69 (361)
Q Consensus        11 ~~~~~~~~~~~~~~l~~~~-~~~p~~~~~evlV~v~~~~i~~~D~~~~~g~~~--------------------~~~~p~~   69 (361)
                      |+++.+...+.+..+.+.+ .+.|.+.+++|+|||.++++|++|++.+.|.++                    ...+|.+
T Consensus         1 ~~a~~~~~~~~~~~~~~~~~~~~~~~~~~~v~i~v~~~~~~~~d~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~p~~   80 (350)
T cd08274           1 MRAVLLTGHGGLDKLVYRDDVPVPTPAPGEVLIRVGACGVNNTDINTREGWYSTEVDGATDSTGAGEAGWWGGTLSFPRI   80 (350)
T ss_pred             CeEEEEeccCCccceeecccCCCCCCCCCeEEEEEEeccCCHHHHHHhcCCCCCccccccccccccccccccCCCCCCcc
Confidence            5666666555555665543 577888999999999999999999998877542                    2356789


Q ss_pred             ccccccEEEEEeCCCCCCCCCCCEEEeccccCCCCCCcccccCCCCCCcchhcccccccCCCCcCCCcceeEEeecCCce
Q 018067           70 PGHEIVGVVTEVGSKVSKFKVGDKVGVGCMVGSCRSCDSCAIDLENYCPKVIMTYANKYHDGTITYGGYSDIMVADEHFV  149 (361)
Q Consensus        70 lG~e~~G~Vv~vG~~v~~~~~GdrV~~~~~~~~c~~c~~c~~~~~~~c~~~~~~~~~~~~~~~~~~g~~a~~v~v~~~~~  149 (361)
                      +|||++|+|+++|+++++|++||||++.+.. +|+.|..|.     .|..          .+....|+|++|+.++.+.+
T Consensus        81 ~G~e~~G~V~~vG~~v~~~~~Gd~V~~~~~~-~~~~~~~~~-----~~~~----------~~~~~~g~~~~~~~v~~~~~  144 (350)
T cd08274          81 QGADIVGRVVAVGEGVDTARIGERVLVDPSI-RDPPEDDPA-----DIDY----------IGSERDGGFAEYTVVPAENA  144 (350)
T ss_pred             cCCcceEEEEEeCCCCCCCCCCCEEEEecCc-CCCCccccc-----cccc----------cCCCCCccceEEEEecHHHc
Confidence            9999999999999999999999999875544 677766542     1211          12234699999999999999


Q ss_pred             EECCCCCCcccccccchhhhhhhhHhhhcCCCCCCCEEEEEcC-ChHHHHHHHHHHHcCCeEEEEeCCchhHHHHHHHcC
Q 018067          150 VRIPEGTPLDATAPLLCAGITVYSPLRFYGLDKPGMHVGVVGL-GGLGHVAVKFAKAMGVKVTVISTSPSKKSEAIERLG  228 (361)
Q Consensus       150 ~~ip~~~~~~~aa~l~~~~~ta~~~l~~~~~~~~g~~vlV~Ga-g~vG~~a~~la~~~g~~vi~~~~~~~~~~~~~~~~g  228 (361)
                      +++|+++++.+++.+++.+.+||+++ ....+++|++|||+|+ |.+|++++++|+++|++++.+++++ ++..+ +++|
T Consensus       145 ~~ip~~~~~~~~a~l~~~~~ta~~~~-~~~~~~~g~~vlI~g~~g~ig~~~~~~a~~~g~~vi~~~~~~-~~~~~-~~~g  221 (350)
T cd08274         145 YPVNSPLSDVELATFPCSYSTAENML-ERAGVGAGETVLVTGASGGVGSALVQLAKRRGAIVIAVAGAA-KEEAV-RALG  221 (350)
T ss_pred             eeCCCCCCHHHHHhcccHHHHHHHHH-hhcCCCCCCEEEEEcCCcHHHHHHHHHHHhcCCEEEEEeCch-hhHHH-HhcC
Confidence            99999999999999999999999998 4566899999999998 9999999999999999999888664 55444 7899


Q ss_pred             CCEEecCCCHHHH-HHhc--CCccEEEEcCCCcccHHHHHhccccCCEEEEecCCCCC-cccChHHHHhCCcEEEecccC
Q 018067          229 ADSFLVSRDQDEM-QAAM--GTMDGIIDTVSAVHPLMPLIGLLKSQGKLVLVGAPEKP-LELPAFSLLMGRKIVGGSMIG  304 (361)
Q Consensus       229 ~~~vv~~~~~~~~-~~~~--~g~d~vid~~g~~~~~~~~~~~l~~~G~~v~~g~~~~~-~~~~~~~~~~~~~~i~g~~~~  304 (361)
                      ++.+++....... ...+  .++|++||++|+.. +..++++++++|+++.+|..... ..++...++.+++++.++...
T Consensus       222 ~~~~~~~~~~~~~~~~~~~~~~~d~vi~~~g~~~-~~~~~~~l~~~G~~v~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~  300 (350)
T cd08274         222 ADTVILRDAPLLADAKALGGEPVDVVADVVGGPL-FPDLLRLLRPGGRYVTAGAIAGPVVELDLRTLYLKDLTLFGSTLG  300 (350)
T ss_pred             CeEEEeCCCccHHHHHhhCCCCCcEEEecCCHHH-HHHHHHHhccCCEEEEecccCCccccCCHHHhhhcceEEEEeecC
Confidence            8765554432211 2222  37999999999875 89999999999999999865444 466777777899999999888


Q ss_pred             CHHHHHHHHHHHHcCCCceeE-EEEecccHHHHHHHHHcCCCceEEEEEe
Q 018067          305 GMKETQEMIDFAAKHNIRADI-EVIPADYVNTALERLAKADVRYRFVIDV  353 (361)
Q Consensus       305 ~~~~~~~~~~ll~~~~~~~~~-~~~~l~~~~~a~~~~~~~~~~gkvvi~~  353 (361)
                      ..+.++++++++.++++++.+ +.++++++++|++.+.+++..+|+++.+
T Consensus       301 ~~~~~~~~~~l~~~~~l~~~~~~~~~~~~~~~a~~~~~~~~~~~kvvi~~  350 (350)
T cd08274         301 TREVFRRLVRYIEEGEIRPVVAKTFPLSEIREAQAEFLEKRHVGKLVLVP  350 (350)
T ss_pred             CHHHHHHHHHHHHCCCcccccccccCHHHHHHHHHHHhcCCCceEEEEeC
Confidence            888999999999999988655 8999999999999999888889999864

This group is a member of the medium chain dehydrogenases/reductase (MDR)/zinc-dependent alcohol dehydrogenase-like family, but lacks the zinc-binding sites of the zinc-dependent alcohol dehydrogenases. The medium chain dehydrogenases/reductase (MDR)/zinc-dependent alcohol dehydrogenase-like family, which contains the zinc-dependent alcohol dehydrogenase (ADH-Zn) and related proteins, is a diverse group of proteins related to the first identified member, class I mammalian ADH. MDRs display a broad range of activities and are distinguished from the smaller short chain dehydrogenases (~ 250 amino acids vs. the ~ 350 amino acids of the MDR). The MDR proteins have 2 domains: a C-terminal NAD(P)-binding Rossmann fold domain of a beta-alpha form and an N-terminal catalytic domain with distant homology to GroES. The MDR group contains a host of activities, including the founding alcoh

>cd05285 sorbitol_DH Sorbitol dehydrogenase

Probab=100.00  E-value=3.9e-39  Score=300.77  Aligned_cols=320  Identities=27%  Similarity=0.372  Sum_probs=261.8

Q ss_pred             CCCCccceeeccCCCCCCeEEEEEeeeccCcchHHhHhcC-CCC--CCCCCcccccccEEEEEeCCCCCCCCCCCEEEec
Q 018067           21 TSGVLSPFHFSRRATGEKDVTFKVTHCGICHSDLHMIKNE-WGN--TIYPIVPGHEIVGVVTEVGSKVSKFKVGDKVGVG   97 (361)
Q Consensus        21 ~~~~l~~~~~~~p~~~~~evlV~v~~~~i~~~D~~~~~g~-~~~--~~~p~~lG~e~~G~Vv~vG~~v~~~~~GdrV~~~   97 (361)
                      ++..+++++.+.|.+.++||+|||.++++|++|++.+.+. .+.  ..+|.++|+|++|+|+++|+++.+|++||+|++.
T Consensus         6 ~~~~~~~~~~~~~~l~~~~vlV~v~~~~l~~~d~~~~~~~~~~~~~~~~~~~~g~e~~G~V~~vG~~v~~~~~Gd~V~~~   85 (343)
T cd05285           6 GPGDLRLEERPIPEPGPGEVLVRVRAVGICGSDVHYYKHGRIGDFVVKEPMVLGHESAGTVVAVGSGVTHLKVGDRVAIE   85 (343)
T ss_pred             cCCceeEEECCCCCCCCCeEEEEEEEeeEccccHHHHccCCCcccCCCCCcccCcceeEEEEeeCCCCCCCCCCCEEEEc
Confidence            4467888899999999999999999999999999876432 111  1356789999999999999999999999999877


Q ss_pred             cccCCCCCCcccccCCCCCCcchhcccccccCCCCcCCCcceeEEeecCCceEECCCCCCcccccccchhhhhhhhHhhh
Q 018067           98 CMVGSCRSCDSCAIDLENYCPKVIMTYANKYHDGTITYGGYSDIMVADEHFVVRIPEGTPLDATAPLLCAGITVYSPLRF  177 (361)
Q Consensus        98 ~~~~~c~~c~~c~~~~~~~c~~~~~~~~~~~~~~~~~~g~~a~~v~v~~~~~~~ip~~~~~~~aa~l~~~~~ta~~~l~~  177 (361)
                      +.+ +|++|.+|..|..++|++..+.  +    .....|+|++|+.++.+.++++|+++++++|+.+ ..+.+||+++ .
T Consensus        86 ~~~-~~~~~~~~~~~~~~~~~~~~~~--~----~~~~~g~~~~~~~v~~~~~~~lP~~~~~~~aa~~-~~~~~a~~~~-~  156 (343)
T cd05285          86 PGV-PCRTCEFCKSGRYNLCPDMRFA--A----TPPVDGTLCRYVNHPADFCHKLPDNVSLEEGALV-EPLSVGVHAC-R  156 (343)
T ss_pred             ccc-CCCCChhHhCcCcccCcCcccc--c----cccCCCceeeeEEecHHHcEECcCCCCHHHhhhh-hHHHHHHHHH-H
Confidence            655 9999999999999999874221  0    1124699999999999999999999999998876 5778899887 5


Q ss_pred             cCCCCCCCEEEEEcCChHHHHHHHHHHHcCCe-EEEEeCCchhHHHHHHHcCCCEEecCCCHH------HHHHhcC--Cc
Q 018067          178 YGLDKPGMHVGVVGLGGLGHVAVKFAKAMGVK-VTVISTSPSKKSEAIERLGADSFLVSRDQD------EMQAAMG--TM  248 (361)
Q Consensus       178 ~~~~~~g~~vlV~Gag~vG~~a~~la~~~g~~-vi~~~~~~~~~~~~~~~~g~~~vv~~~~~~------~~~~~~~--g~  248 (361)
                      .+.+++|++|+|.|+|.+|++++|+|+.+|++ |+++++++++...+ +++|++.++++++.+      .+.....  ++
T Consensus       157 ~~~~~~g~~vlI~g~g~vG~~a~~lak~~G~~~v~~~~~~~~~~~~~-~~~g~~~vi~~~~~~~~~~~~~~~~~~~~~~~  235 (343)
T cd05285         157 RAGVRPGDTVLVFGAGPIGLLTAAVAKAFGATKVVVTDIDPSRLEFA-KELGATHTVNVRTEDTPESAEKIAELLGGKGP  235 (343)
T ss_pred             hcCCCCCCEEEEECCCHHHHHHHHHHHHcCCcEEEEECCCHHHHHHH-HHcCCcEEeccccccchhHHHHHHHHhCCCCC
Confidence            67789999999998899999999999999997 77777777665544 789999988877543      2334433  59


Q ss_pred             cEEEEcCCCcccHHHHHhccccCCEEEEecCCCCCcccChHHHHhCCcEEEecccCCHHHHHHHHHHHHcCCCc--eeE-
Q 018067          249 DGIIDTVSAVHPLMPLIGLLKSQGKLVLVGAPEKPLELPAFSLLMGRKIVGGSMIGGMKETQEMIDFAAKHNIR--ADI-  325 (361)
Q Consensus       249 d~vid~~g~~~~~~~~~~~l~~~G~~v~~g~~~~~~~~~~~~~~~~~~~i~g~~~~~~~~~~~~~~ll~~~~~~--~~~-  325 (361)
                      |++|||+|+...+...+++++++|+++.+|..+....++...+..+++.+.++.... +.++++++++.++.+.  +.+ 
T Consensus       236 d~vld~~g~~~~~~~~~~~l~~~G~~v~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~-~~~~~~~~~l~~~~l~~~~~~~  314 (343)
T cd05285         236 DVVIECTGAESCIQTAIYATRPGGTVVLVGMGKPEVTLPLSAASLREIDIRGVFRYA-NTYPTAIELLASGKVDVKPLIT  314 (343)
T ss_pred             CEEEECCCCHHHHHHHHHHhhcCCEEEEEccCCCCCccCHHHHhhCCcEEEEeccCh-HHHHHHHHHHHcCCCCchHhEE
Confidence            999999998745889999999999999998755444555556777888888876544 6788999999999875  223 


Q ss_pred             EEEecccHHHHHHHHHcCCC-ceEEEE
Q 018067          326 EVIPADYVNTALERLAKADV-RYRFVI  351 (361)
Q Consensus       326 ~~~~l~~~~~a~~~~~~~~~-~gkvvi  351 (361)
                      +.|+++++.+|++.+.+++. .+|++|
T Consensus       315 ~~~~l~~~~~a~~~~~~~~~~~~k~~~  341 (343)
T cd05285         315 HRFPLEDAVEAFETAAKGKKGVIKVVI  341 (343)
T ss_pred             EEEeHHHHHHHHHHHHcCCCCeeEEEE
Confidence            78999999999999998864 489998

Sorbitol and aldose reductase are NAD(+) binding proteins of the polyol pathway, which interconverts glucose and fructose. Sorbitol dehydrogenase is tetrameric and has a single catalytic zinc per subunit. Aldose reductase catalyzes the NADP(H)-dependent conversion of glucose to sorbital, and SDH uses NAD(H) in the conversion of sorbitol to fructose. NAD(P)(H)-dependent oxidoreductases are the major enzymes in the interconversion of alcohols and aldehydes, or ketones. The medium chain alcohol dehydrogenase family (MDR) have a NAD(P)(H)-binding domain in a Rossmann fold of a beta-alpha form. The N-terminal region typically has an all-beta catalytic domain. These proteins typically form dimers (typically higher plants, mammals) or tetramers (yeast, bacteria), and have 2 tightly bound zinc atoms per subunit.

>cd08293 PTGR2 Prostaglandin reductase

Probab=100.00  E-value=2.2e-39  Score=302.63  Aligned_cols=294  Identities=14%  Similarity=0.119  Sum_probs=229.6

Q ss_pred             CCCccceeeccCCCC-CCeEEEEEeeeccCcchHHhHhcCC---CCCCCCCcccccccEEEEEeCCCCCCCCCCCEEEec
Q 018067           22 SGVLSPFHFSRRATG-EKDVTFKVTHCGICHSDLHMIKNEW---GNTIYPIVPGHEIVGVVTEVGSKVSKFKVGDKVGVG   97 (361)
Q Consensus        22 ~~~l~~~~~~~p~~~-~~evlV~v~~~~i~~~D~~~~~g~~---~~~~~p~~lG~e~~G~Vv~vG~~v~~~~~GdrV~~~   97 (361)
                      ++.+++++++.|+|. ++||||||+++|||+.|........   ....+|.++|||++|+|+++|+++++|++||||+. 
T Consensus        20 ~~~~~~~~~~~p~~~~~~evlV~v~a~gin~~d~~~~~~~~~~~~~~~~~~~~G~e~~G~V~~vG~~v~~~~~Gd~V~~-   98 (345)
T cd08293          20 AENFRVEECTLPDELNEGQVLVRTLYLSVDPYMRCRMNEDTGTDYLAPWQLSQVLDGGGVGVVEESKHQKFAVGDIVTS-   98 (345)
T ss_pred             ccceEEEeccCCCCCCCCeEEEEEEEEecCHHHHhhcccccccccCCCccCCCceEeeEEEEEeccCCCCCCCCCEEEe-
Confidence            466888889999875 9999999999999999964332111   11246788999999999999999999999999963 


Q ss_pred             cccCCCCCCcccccCCCCCCcchhcccccccCCCCcCCCcceeEEeecCCceEECCCCCCccc----ccccchhhhhhhh
Q 018067           98 CMVGSCRSCDSCAIDLENYCPKVIMTYANKYHDGTITYGGYSDIMVADEHFVVRIPEGTPLDA----TAPLLCAGITVYS  173 (361)
Q Consensus        98 ~~~~~c~~c~~c~~~~~~~c~~~~~~~~~~~~~~~~~~g~~a~~v~v~~~~~~~ip~~~~~~~----aa~l~~~~~ta~~  173 (361)
                                                          ..++|+||++++.+.++++|+++++.+    +++++.++.|||+
T Consensus        99 ------------------------------------~~~~~ae~~~v~~~~~~~iP~~~~~~~~~~~~a~~~~~~~ta~~  142 (345)
T cd08293          99 ------------------------------------FNWPWQTYAVLDGSSLEKVDPQLVDGHLSYFLGAVGLPGLTALI  142 (345)
T ss_pred             ------------------------------------cCCCceeEEEecHHHeEEcCccccccchhHHhhhcCcHHHHHHH
Confidence                                                125699999999999999999865443    4567778999999


Q ss_pred             HhhhcCCCCCC--CEEEEEcC-ChHHHHHHHHHHHcCC-eEEEEeCCchhHHHHHHHcCCCEEecCCCHH---HHHHhc-
Q 018067          174 PLRFYGLDKPG--MHVGVVGL-GGLGHVAVKFAKAMGV-KVTVISTSPSKKSEAIERLGADSFLVSRDQD---EMQAAM-  245 (361)
Q Consensus       174 ~l~~~~~~~~g--~~vlV~Ga-g~vG~~a~~la~~~g~-~vi~~~~~~~~~~~~~~~~g~~~vv~~~~~~---~~~~~~-  245 (361)
                      ++.+.+++++|  ++|||+|+ |++|++++|+|+++|+ +|+++++++++++.+.+++|+++++++++.+   .+.+++ 
T Consensus       143 al~~~~~~~~g~~~~VlI~ga~g~vG~~aiqlAk~~G~~~Vi~~~~s~~~~~~~~~~lGa~~vi~~~~~~~~~~i~~~~~  222 (345)
T cd08293         143 GIQEKGHITPGANQTMVVSGAAGACGSLAGQIGRLLGCSRVVGICGSDEKCQLLKSELGFDAAINYKTDNVAERLRELCP  222 (345)
T ss_pred             HHHHhccCCCCCCCEEEEECCCcHHHHHHHHHHHHcCCCEEEEEcCCHHHHHHHHHhcCCcEEEECCCCCHHHHHHHHCC
Confidence            99877778876  99999997 9999999999999999 7999998888877775569999999887643   344444 


Q ss_pred             CCccEEEEcCCCcccHHHHHhccccCCEEEEecCCCC---Cc----ccCh--HHH-HhCCcEEEecccCC-----HHHHH
Q 018067          246 GTMDGIIDTVSAVHPLMPLIGLLKSQGKLVLVGAPEK---PL----ELPA--FSL-LMGRKIVGGSMIGG-----MKETQ  310 (361)
Q Consensus       246 ~g~d~vid~~g~~~~~~~~~~~l~~~G~~v~~g~~~~---~~----~~~~--~~~-~~~~~~i~g~~~~~-----~~~~~  310 (361)
                      +++|++||++|+.. +..++++++++|+++.+|..+.   ..    .+..  ..+ ..+++++.+.....     .+.++
T Consensus       223 ~gvd~vid~~g~~~-~~~~~~~l~~~G~iv~~G~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  301 (345)
T cd08293         223 EGVDVYFDNVGGEI-SDTVISQMNENSHIILCGQISQYNKDVPYPPPLPEATEAILKERNITRERFLVLNYKDKFEEAIA  301 (345)
T ss_pred             CCceEEEECCCcHH-HHHHHHHhccCCEEEEEeeeecccCccCccccccchhHHHhhhcceEEEEEEeeccHhHHHHHHH
Confidence            37999999999977 7999999999999999985321   11    1111  111 12344433322111     23467


Q ss_pred             HHHHHHHcCCCceeE-EEEecccHHHHHHHHHcCCCceEEEEEe
Q 018067          311 EMIDFAAKHNIRADI-EVIPADYVNTALERLAKADVRYRFVIDV  353 (361)
Q Consensus       311 ~~~~ll~~~~~~~~~-~~~~l~~~~~a~~~~~~~~~~gkvvi~~  353 (361)
                      ++++++.++++++.. ..++++++++||+.+.+++..||+|+.+
T Consensus       302 ~~~~l~~~g~i~~~~~~~~~l~~~~~A~~~~~~~~~~gkvvl~~  345 (345)
T cd08293         302 QLSQWVKEGKLKVKETVYEGLENAGEAFQSMMNGGNIGKQIVKV  345 (345)
T ss_pred             HHHHHHHCCCccceeEEeecHHHHHHHHHHHhcCCCCCeEEEEC
Confidence            788999999998765 5679999999999999998889999874

Prostaglandins and related eicosanoids are metabolized by the oxidation of the 15(S)-hydroxyl group of the NAD+-dependent (type I 15-PGDH) 15-prostaglandin dehydrogenase (15-PGDH) followed by reduction by NADPH/NADH-dependent (type II 15-PGDH) delta-13 15-prostaglandin reductase (13-PGR) to 15-keto-13,14,-dihydroprostaglandins. 13-PGR is a bifunctional enzyme, since it also has leukotriene B(4) 12-hydroxydehydrogenase activity. These 15-PGDH and related enzymes are members of the medium chain dehydrogenase/reductase family. The medium chain dehydrogenases/reductase (MDR)/zinc-dependent alcohol dehydrogenase-like family, which contains the zinc-dependent alcohol dehydrogenase (ADH-Zn) and related proteins, is a diverse group of proteins related to the first identified member, class I mammalian ADH. MDRs display a broad range of activities and are distinguished from the smaller short chain dehydrogenases (~ 250 amino acids vs. the ~ 350 amino acid

>TIGR02825 B4_12hDH leukotriene B4 12-hydroxydehydrogenase/15-oxo-prostaglandin 13-reductase

Probab=100.00  E-value=2.3e-39  Score=300.06  Aligned_cols=290  Identities=18%  Similarity=0.188  Sum_probs=237.8

Q ss_pred             eecCCCCCccceeeccCCCCCCeEEEEEeeeccCcchHHhHhcCCCCCCCCCcccccccEEEEEeCCCCCCCCCCCEEEe
Q 018067           17 AAKDTSGVLSPFHFSRRATGEKDVTFKVTHCGICHSDLHMIKNEWGNTIYPIVPGHEIVGVVTEVGSKVSKFKVGDKVGV   96 (361)
Q Consensus        17 ~~~~~~~~l~~~~~~~p~~~~~evlV~v~~~~i~~~D~~~~~g~~~~~~~p~~lG~e~~G~Vv~vG~~v~~~~~GdrV~~   96 (361)
                      ..+..|+.+++.+.+.|.|++|||||||+++++|+.|.   +|.+.....|.++|+|++|+|+++|+   +|++||||+.
T Consensus        11 ~~~~~~~~l~~~~~~~p~~~~~evlv~v~a~~~n~~~~---~g~~~~~~~~~i~G~~~~g~v~~~~~---~~~~GdrV~~   84 (325)
T TIGR02825        11 VGYPTDSDFELKTVELPPLNNGEVLLEALFLSVDPYMR---VAAKRLKEGDTMMGQQVARVVESKNV---ALPKGTIVLA   84 (325)
T ss_pred             CCCCCCCceEEEeccCCCCCCCcEEEEEEEEecCHHHh---cccCcCCCCCcEecceEEEEEEeCCC---CCCCCCEEEE
Confidence            33456678888999999999999999999999999654   34333234478999999999999874   5999999972


Q ss_pred             ccccCCCCCCcccccCCCCCCcchhcccccccCCCCcCCCcceeEEeecCCceEEC----CCCCCcccc-cccchhhhhh
Q 018067           97 GCMVGSCRSCDSCAIDLENYCPKVIMTYANKYHDGTITYGGYSDIMVADEHFVVRI----PEGTPLDAT-APLLCAGITV  171 (361)
Q Consensus        97 ~~~~~~c~~c~~c~~~~~~~c~~~~~~~~~~~~~~~~~~g~~a~~v~v~~~~~~~i----p~~~~~~~a-a~l~~~~~ta  171 (361)
                                                            .++|++|+.++.+.++++    |+++++++| +++++++.||
T Consensus        85 --------------------------------------~~~~~~~~~~~~~~~~~l~~~~p~~~~~~~aaa~l~~~~~TA  126 (325)
T TIGR02825        85 --------------------------------------SPGWTSHSISDGKDLEKLLTEWPDTLPLSLALGTVGMPGLTA  126 (325)
T ss_pred             --------------------------------------ecCceeeEEechhheEEccccccCCCCHHHHHHhcccHHHHH
Confidence                                                  235899999999988877    899999987 6889999999


Q ss_pred             hhHhhhcCCCCCCCEEEEEcC-ChHHHHHHHHHHHcCCeEEEEeCCchhHHHHHHHcCCCEEecCCCH-H---HHHHhc-
Q 018067          172 YSPLRFYGLDKPGMHVGVVGL-GGLGHVAVKFAKAMGVKVTVISTSPSKKSEAIERLGADSFLVSRDQ-D---EMQAAM-  245 (361)
Q Consensus       172 ~~~l~~~~~~~~g~~vlV~Ga-g~vG~~a~~la~~~g~~vi~~~~~~~~~~~~~~~~g~~~vv~~~~~-~---~~~~~~-  245 (361)
                      |+++.+.+.+++|++|||+|+ |++|++++|+|+.+|++|+.+++++++.+.+ +++|++.++++++. +   .+.... 
T Consensus       127 ~~~l~~~~~~~~g~~VLI~ga~g~vG~~aiqlAk~~G~~Vi~~~~s~~~~~~~-~~lGa~~vi~~~~~~~~~~~~~~~~~  205 (325)
T TIGR02825       127 YFGLLEICGVKGGETVMVNAAAGAVGSVVGQIAKLKGCKVVGAAGSDEKVAYL-KKLGFDVAFNYKTVKSLEETLKKASP  205 (325)
T ss_pred             HHHHHHHhCCCCCCEEEEeCCccHHHHHHHHHHHHcCCEEEEEeCCHHHHHHH-HHcCCCEEEeccccccHHHHHHHhCC
Confidence            999988888999999999996 9999999999999999999998888776555 78999999988753 2   233333 


Q ss_pred             CCccEEEEcCCCcccHHHHHhccccCCEEEEecCCCC-----Ccc--cChHHHHhCCcEEEecccCC------HHHHHHH
Q 018067          246 GTMDGIIDTVSAVHPLMPLIGLLKSQGKLVLVGAPEK-----PLE--LPAFSLLMGRKIVGGSMIGG------MKETQEM  312 (361)
Q Consensus       246 ~g~d~vid~~g~~~~~~~~~~~l~~~G~~v~~g~~~~-----~~~--~~~~~~~~~~~~i~g~~~~~------~~~~~~~  312 (361)
                      +++|++||++|+.. +..++++++++|+++.+|....     ...  .....++.+++++.++....      .+.++++
T Consensus       206 ~gvdvv~d~~G~~~-~~~~~~~l~~~G~iv~~G~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~  284 (325)
T TIGR02825       206 DGYDCYFDNVGGEF-SNTVIGQMKKFGRIAICGAISTYNRTGPLPPGPPPEIVIYQELRMEGFIVNRWQGEVRQKALKEL  284 (325)
T ss_pred             CCeEEEEECCCHHH-HHHHHHHhCcCcEEEEecchhhcccCCCCCCCcchHHHhhhcceEeEEEehhhhhhhhHHHHHHH
Confidence            37999999999876 8999999999999999986432     111  12344666888888876432      3468889


Q ss_pred             HHHHHcCCCceeE-EEEecccHHHHHHHHHcCCCceEEEEE
Q 018067          313 IDFAAKHNIRADI-EVIPADYVNTALERLAKADVRYRFVID  352 (361)
Q Consensus       313 ~~ll~~~~~~~~~-~~~~l~~~~~a~~~~~~~~~~gkvvi~  352 (361)
                      ++++.+|++++.+ ..|+|+++++|++.+.+++..||+|++
T Consensus       285 ~~l~~~g~l~~~~~~~~~l~~~~~A~~~~~~~~~~gkvVv~  325 (325)
T TIGR02825       285 LKWVLEGKIQYKEYVIEGFENMPAAFMGMLKGENLGKTIVK  325 (325)
T ss_pred             HHHHHCCCcccceeccccHHHHHHHHHHHhcCCCCCeEEeC
Confidence            9999999999776 789999999999999999988999873

Leukotriene B4 12-hydroxydehydrogenase is an NADP-dependent enzyme of arachidonic acid metabolism, responsible for converting leukotriene B4 to the much less active metabolite 12-oxo-leukotriene B4. The BRENDA database lists leukotriene B4 12-hydroxydehydrogenase as one of the synonyms of 2-alkenal reductase (EC 1.3.1.74), while 1.3.1.48 is 15-oxoprostaglandin 13-reductase.

>cd08236 sugar_DH NAD(P)-dependent sugar dehydrogenases

Probab=100.00  E-value=2.8e-38  Score=294.98  Aligned_cols=326  Identities=25%  Similarity=0.400  Sum_probs=266.4

Q ss_pred             cceeeeeecCCCCCccceeeccCCCCCCeEEEEEeeeccCcchHHhHhcCCCCCCCCCcccccccEEEEEeCCCCCCCCC
Q 018067           11 KNAFGWAAKDTSGVLSPFHFSRRATGEKDVTFKVTHCGICHSDLHMIKNEWGNTIYPIVPGHEIVGVVTEVGSKVSKFKV   90 (361)
Q Consensus        11 ~~~~~~~~~~~~~~l~~~~~~~p~~~~~evlV~v~~~~i~~~D~~~~~g~~~~~~~p~~lG~e~~G~Vv~vG~~v~~~~~   90 (361)
                      |+++.+..   ++.+.+++.+.|+++++||+||+.++++|+.|+..+.+.+. ..+|.++|+|++|+|+++|+++..|++
T Consensus         1 ~~a~~~~~---~~~l~~~~~~~~~l~~~~v~v~v~~~~~n~~d~~~~~~~~~-~~~~~~~g~~~~G~V~~~g~~v~~~~~   76 (343)
T cd08236           1 MKALVLTG---PGDLRYEDIPKPEPGPGEVLVKVKACGICGSDIPRYLGTGA-YHPPLVLGHEFSGTVEEVGSGVDDLAV   76 (343)
T ss_pred             CeeEEEec---CCceeEEecCCCCCCCCeEEEEEEEEEECccchHhhcCCCC-CCCCcccCcceEEEEEEECCCCCcCCC
Confidence            45556543   34688888999999999999999999999999998877653 345788999999999999999999999


Q ss_pred             CCEEEeccccCCCCCCcccccCCCCCCcchhcccccccCCCCcCCCcceeEEeecCCceEECCCCCCcccccccchhhhh
Q 018067           91 GDKVGVGCMVGSCRSCDSCAIDLENYCPKVIMTYANKYHDGTITYGGYSDIMVADEHFVVRIPEGTPLDATAPLLCAGIT  170 (361)
Q Consensus        91 GdrV~~~~~~~~c~~c~~c~~~~~~~c~~~~~~~~~~~~~~~~~~g~~a~~v~v~~~~~~~ip~~~~~~~aa~l~~~~~t  170 (361)
                      ||+|+..+.. .|+.|.+|..+.++.|+...+.       +....|+|++|+.++.+.++++|+++++++++.+ ..+.+
T Consensus        77 Gd~V~~~~~~-~~~~~~~~~~~~~~~~~~~~~~-------~~~~~g~~~~~~~~~~~~~~~lP~~~~~~~aa~~-~~~~t  147 (343)
T cd08236          77 GDRVAVNPLL-PCGKCEYCKKGEYSLCSNYDYI-------GSRRDGAFAEYVSVPARNLIKIPDHVDYEEAAMI-EPAAV  147 (343)
T ss_pred             CCEEEEcCCC-CCCCChhHHCcChhhCCCcceE-------ecccCCcccceEEechHHeEECcCCCCHHHHHhc-chHHH
Confidence            9999876554 8999999999999999875321       3346799999999999999999999999999877 57789


Q ss_pred             hhhHhhhcCCCCCCCEEEEEcCChHHHHHHHHHHHcCCe-EEEEeCCchhHHHHHHHcCCCEEecCCCHH--HHHHhcC-
Q 018067          171 VYSPLRFYGLDKPGMHVGVVGLGGLGHVAVKFAKAMGVK-VTVISTSPSKKSEAIERLGADSFLVSRDQD--EMQAAMG-  246 (361)
Q Consensus       171 a~~~l~~~~~~~~g~~vlV~Gag~vG~~a~~la~~~g~~-vi~~~~~~~~~~~~~~~~g~~~vv~~~~~~--~~~~~~~-  246 (361)
                      ||+++. ...++++++|+|+|+|.+|++++|+|+.+|++ ++++++++++...+ +++|++.++++++..  .+..... 
T Consensus       148 a~~~l~-~~~~~~~~~vlI~g~g~~g~~~~~lA~~~G~~~v~~~~~~~~~~~~l-~~~g~~~~~~~~~~~~~~~~~~~~~  225 (343)
T cd08236         148 ALHAVR-LAGITLGDTVVVIGAGTIGLLAIQWLKILGAKRVIAVDIDDEKLAVA-RELGADDTINPKEEDVEKVRELTEG  225 (343)
T ss_pred             HHHHHH-hcCCCCCCEEEEECCCHHHHHHHHHHHHcCCCEEEEEcCCHHHHHHH-HHcCCCEEecCccccHHHHHHHhCC
Confidence            999997 56689999999998899999999999999997 88888887776655 789998888876543  3333333 


Q ss_pred             -CccEEEEcCCCcccHHHHHhccccCCEEEEecCCCCCc---ccChHHHHhCCcEEEecccCC-----HHHHHHHHHHHH
Q 018067          247 -TMDGIIDTVSAVHPLMPLIGLLKSQGKLVLVGAPEKPL---ELPAFSLLMGRKIVGGSMIGG-----MKETQEMIDFAA  317 (361)
Q Consensus       247 -g~d~vid~~g~~~~~~~~~~~l~~~G~~v~~g~~~~~~---~~~~~~~~~~~~~i~g~~~~~-----~~~~~~~~~ll~  317 (361)
                       ++|++||++|....+..++++++++|+++.+|......   ..+...++.++.++.+.....     .+.++++++++.
T Consensus       226 ~~~d~vld~~g~~~~~~~~~~~l~~~G~~v~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  305 (343)
T cd08236         226 RGADLVIEAAGSPATIEQALALARPGGKVVLVGIPYGDVTLSEEAFEKILRKELTIQGSWNSYSAPFPGDEWRTALDLLA  305 (343)
T ss_pred             CCCCEEEECCCCHHHHHHHHHHhhcCCEEEEEcccCCCcccccCCHHHHHhcCcEEEEEeeccccccchhhHHHHHHHHH
Confidence             59999999987665889999999999999999764432   223344567888888876543     466888999999


Q ss_pred             cCCCc--eeE-EEEecccHHHHHHHHHc-CCCceEEEE
Q 018067          318 KHNIR--ADI-EVIPADYVNTALERLAK-ADVRYRFVI  351 (361)
Q Consensus       318 ~~~~~--~~~-~~~~l~~~~~a~~~~~~-~~~~gkvvi  351 (361)
                      +++++  +.+ ..+++++++++++.+++ ++..||+|+
T Consensus       306 ~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~k~v~  343 (343)
T cd08236         306 SGKIKVEPLITHRLPLEDGPAAFERLADREEFSGKVLL  343 (343)
T ss_pred             cCCCChHHheeeeecHHHHHHHHHHHHcCCCCeeEEeC
Confidence            99886  333 79999999999999998 555688874

This group contains proteins identified as sorbitol dehydrogenases and other sugar dehydrogenases of the medium-chain dehydrogenase/reductase family (MDR), which includes zinc-dependent alcohol dehydrogenase and related proteins. Sorbitol and aldose reductase are NAD(+) binding proteins of the polyol pathway, which interconverts glucose and fructose. Sorbitol dehydrogenase is tetrameric and has a single catalytic zinc per subunit. NAD(P)(H)-dependent oxidoreductases are the major enzymes in the interconversion of alcohols and aldehydes, or ketones. Related proteins include threonine dehydrogenase, formaldehyde dehydrogenase, and butanediol dehydrogenase. The medium chain alcohol dehydrogenase family (MDR) has a NAD(P)(H)-binding domain in a Rossmann fold of a beta-alpha form. The N-terminal region typically has an all-beta catalytic domain. These proteins typically form dimers (typically higher plants, mammals) or tetramers (yeast

>cd08258 Zn_ADH4 Alcohol dehydrogenases of the MDR family

Probab=100.00  E-value=2.1e-38  Score=291.08  Aligned_cols=299  Identities=27%  Similarity=0.384  Sum_probs=249.5

Q ss_pred             cceeeeeecCCCCCccceeeccCCCCCCeEEEEEeeeccCcchHHhHhcCCCCCCCCCcccccccEEEEEeCCCCCCCCC
Q 018067           11 KNAFGWAAKDTSGVLSPFHFSRRATGEKDVTFKVTHCGICHSDLHMIKNEWGNTIYPIVPGHEIVGVVTEVGSKVSKFKV   90 (361)
Q Consensus        11 ~~~~~~~~~~~~~~l~~~~~~~p~~~~~evlV~v~~~~i~~~D~~~~~g~~~~~~~p~~lG~e~~G~Vv~vG~~v~~~~~   90 (361)
                      |+++.... ..+..+++++++.|++.+++|+||+.++++|++|++...+.+.....|.++|+|++|+|+++|++++.|++
T Consensus         1 ~~~~~~~~-~~~~~~~~~~~~~p~~~~~~v~V~v~~~~l~~~d~~~~~g~~~~~~~p~~~G~e~~G~V~~vG~~v~~~~~   79 (306)
T cd08258           1 MKALVKTG-PGPGNVELREVPEPEPGPGEVLIKVAAAGICGSDLHIYKGDYDPVETPVVLGHEFSGTIVEVGPDVEGWKV   79 (306)
T ss_pred             CeeEEEec-CCCCceEEeecCCCCCCCCeEEEEEEEEEechhhHHHHcCCCCcCCCCeeeccceEEEEEEECCCcCcCCC
Confidence            34444433 23466889999999999999999999999999999988876543355789999999999999999999999


Q ss_pred             CCEEEeccccCCCCCCcccccCCCCCCcchhcccccccCCCCcCCCcceeEEeecCCceEECCCCCCcccccccchhhhh
Q 018067           91 GDKVGVGCMVGSCRSCDSCAIDLENYCPKVIMTYANKYHDGTITYGGYSDIMVADEHFVVRIPEGTPLDATAPLLCAGIT  170 (361)
Q Consensus        91 GdrV~~~~~~~~c~~c~~c~~~~~~~c~~~~~~~~~~~~~~~~~~g~~a~~v~v~~~~~~~ip~~~~~~~aa~l~~~~~t  170 (361)
                      ||+|+..+.+++|+.|.+|.++.++.|++...  .     +....|+|++|+.++.+.++++|+++++++++ +.....+
T Consensus        80 Gd~V~~~~~~~~~~~~~~~~~~~~~~~~~~~~--~-----~~~~~g~~~~~~~v~~~~~~~lp~~~~~~~aa-~~~~~~~  151 (306)
T cd08258          80 GDRVVSETTFSTCGRCPYCRRGDYNLCPHRKG--I-----GTQADGGFAEYVLVPEESLHELPENLSLEAAA-LTEPLAV  151 (306)
T ss_pred             CCEEEEccCcCCCCCCcchhCcCcccCCCCce--e-----eecCCCceEEEEEcchHHeEECcCCCCHHHHH-hhchHHH
Confidence            99999888888999999999999999987421  1     23456999999999999999999999999887 6777889


Q ss_pred             hhhHhhhcCCCCCCCEEEEEcCChHHHHHHHHHHHcCCeEEEEeC-CchhHHHHHHHcCCCEEecCCCHHH---HHHhc-
Q 018067          171 VYSPLRFYGLDKPGMHVGVVGLGGLGHVAVKFAKAMGVKVTVIST-SPSKKSEAIERLGADSFLVSRDQDE---MQAAM-  245 (361)
Q Consensus       171 a~~~l~~~~~~~~g~~vlV~Gag~vG~~a~~la~~~g~~vi~~~~-~~~~~~~~~~~~g~~~vv~~~~~~~---~~~~~-  245 (361)
                      +|+++.....++++++|+|.|+|.+|++++++|+.+|++|+.+.+ +++.+..+++++|++++ +++..+.   +.... 
T Consensus       152 a~~~l~~~~~~~~g~~vlI~g~g~~g~~~~~la~~~G~~v~~~~~~~~~~~~~~~~~~g~~~~-~~~~~~~~~~l~~~~~  230 (306)
T cd08258         152 AVHAVAERSGIRPGDTVVVFGPGPIGLLAAQVAKLQGATVVVVGTEKDEVRLDVAKELGADAV-NGGEEDLAELVNEITD  230 (306)
T ss_pred             HHHHHHHhcCCCCCCEEEEECCCHHHHHHHHHHHHcCCEEEEECCCCCHHHHHHHHHhCCccc-CCCcCCHHHHHHHHcC
Confidence            999998888889999999988899999999999999999887743 33445566688999877 6655433   33333 


Q ss_pred             -CCccEEEEcCCCcccHHHHHhccccCCEEEEecCCC-CCcccChHHHHhCCcEEEecccCCHHHHHHHHHHHHcC
Q 018067          246 -GTMDGIIDTVSAVHPLMPLIGLLKSQGKLVLVGAPE-KPLELPAFSLLMGRKIVGGSMIGGMKETQEMIDFAAKH  319 (361)
Q Consensus       246 -~g~d~vid~~g~~~~~~~~~~~l~~~G~~v~~g~~~-~~~~~~~~~~~~~~~~i~g~~~~~~~~~~~~~~ll~~~  319 (361)
                       .++|++||++|+...+...+++++++|+++.+|... ....++...++.++++|.|+..++.++++++++++++|
T Consensus       231 ~~~vd~vld~~g~~~~~~~~~~~l~~~G~~v~~g~~~~~~~~~~~~~~~~~~~~i~g~~~~~~~~~~~~~~~~~~~  306 (306)
T cd08258         231 GDGADVVIECSGAVPALEQALELLRKGGRIVQVGIFGPLAASIDVERIIQKELSVIGSRSSTPASWETALRLLASG  306 (306)
T ss_pred             CCCCCEEEECCCChHHHHHHHHHhhcCCEEEEEcccCCCCcccCHHHHhhcCcEEEEEecCchHhHHHHHHHHhcC
Confidence             369999999987665889999999999999999865 34566777788899999999999999999999999875

This group shares the zinc coordination sites of the zinc-dependent alcohol dehydrogenases. The medium chain dehydrogenases/reductase (MDR)/zinc-dependent alcohol dehydrogenase-like family, which contains the zinc-dependent alcohol dehydrogenase (ADH-Zn) and related proteins, is a diverse group of proteins related to the first identified member, class I mammalian ADH. MDRs display a broad range of activities and are distinguished from the smaller short chain dehydrogenases (~ 250 amino acids vs. the ~ 350 amino acids of the MDR). The MDR proteins have 2 domains: a C-terminal NAD(P)-binding Rossmann fold domain of an beta-alpha form and an N-terminal catalytic domain with distant homology to GroES. The MDR group contains a host of activities, including the founding alcohol dehydrogenase (ADH), quinone reductase, sorbitol dehydrogenase, formaldehyde dehydrogenase, butanediol DH, ketose reductase, cinnamyl reductase, and numerous

>cd08294 leukotriene_B4_DH_like 13-PGR is a bifunctional enzyme with delta-13 15-prostaglandin reductase and leukotriene B4 12 hydroxydehydrogenase activity

Probab=100.00  E-value=1.7e-38  Score=294.65  Aligned_cols=298  Identities=17%  Similarity=0.160  Sum_probs=239.6

Q ss_pred             ccceeeeee-c-CCC--CCccceeeccCCCCCCeEEEEEeeeccCcchHHhHhcCCCCCCCCCcccccccEEEEEeCCCC
Q 018067           10 PKNAFGWAA-K-DTS--GVLSPFHFSRRATGEKDVTFKVTHCGICHSDLHMIKNEWGNTIYPIVPGHEIVGVVTEVGSKV   85 (361)
Q Consensus        10 ~~~~~~~~~-~-~~~--~~l~~~~~~~p~~~~~evlV~v~~~~i~~~D~~~~~g~~~~~~~p~~lG~e~~G~Vv~vG~~v   85 (361)
                      .|+++.+.. + +.+  +.+++++.+.|+|+++||||||++++||+.|.+....   ...+|.++|+|++|+|++   .+
T Consensus         2 ~~~~~~~~~~~~~~~~~~~l~~~~~~~p~~~~~evlVkv~a~~in~~~~~~~~~---~~~~p~v~G~e~~G~V~~---~~   75 (329)
T cd08294           2 KAKTWVLKKHFDGKPKESDFELVEEELPPLKDGEVLCEALFLSVDPYMRPYSKR---LNEGDTMIGTQVAKVIES---KN   75 (329)
T ss_pred             CceEEEEecCCCCCCCccceEEEecCCCCCCCCcEEEEEEEEecCHHHhccccc---CCCCCcEecceEEEEEec---CC
Confidence            467777766 2 333  6788999999999999999999999999887653211   124578999999999995   34


Q ss_pred             CCCCCCCEEEeccccCCCCCCcccccCCCCCCcchhcccccccCCCCcCCCcceeEEeecCC---ceEECCCCCC--c--
Q 018067           86 SKFKVGDKVGVGCMVGSCRSCDSCAIDLENYCPKVIMTYANKYHDGTITYGGYSDIMVADEH---FVVRIPEGTP--L--  158 (361)
Q Consensus        86 ~~~~~GdrV~~~~~~~~c~~c~~c~~~~~~~c~~~~~~~~~~~~~~~~~~g~~a~~v~v~~~---~~~~ip~~~~--~--  158 (361)
                      +.|++||||+.                                      .++|++|+.++.+   .++++|++++  +  
T Consensus        76 ~~~~~Gd~V~~--------------------------------------~~~~~~~~~~~~~~~~~~~~iP~~~~~~~~~  117 (329)
T cd08294          76 SKFPVGTIVVA--------------------------------------SFGWRTHTVSDGKDQPDLYKLPADLPDDLPP  117 (329)
T ss_pred             CCCCCCCEEEe--------------------------------------eCCeeeEEEECCccccceEECCccccccCCh
Confidence            57999999962                                      2468999999999   9999999988  2  


Q ss_pred             -ccccccchhhhhhhhHhhhcCCCCCCCEEEEEcC-ChHHHHHHHHHHHcCCeEEEEeCCchhHHHHHHHcCCCEEecCC
Q 018067          159 -DATAPLLCAGITVYSPLRFYGLDKPGMHVGVVGL-GGLGHVAVKFAKAMGVKVTVISTSPSKKSEAIERLGADSFLVSR  236 (361)
Q Consensus       159 -~~aa~l~~~~~ta~~~l~~~~~~~~g~~vlV~Ga-g~vG~~a~~la~~~g~~vi~~~~~~~~~~~~~~~~g~~~vv~~~  236 (361)
                       ..++++++++.|||+++.+..++++|++|||+|+ |++|++++|+|+.+|++|++++++++++..+ +++|++++++++
T Consensus       118 ~~~~a~~~~~~~ta~~al~~~~~~~~g~~vlI~ga~g~vG~~aiqlA~~~G~~vi~~~~s~~~~~~l-~~~Ga~~vi~~~  196 (329)
T cd08294         118 SLALGVLGMPGLTAYFGLLEICKPKAGETVVVNGAAGAVGSLVGQIAKIKGCKVIGCAGSDDKVAWL-KELGFDAVFNYK  196 (329)
T ss_pred             HHHHHhcccHHHHHHHHHHHhcCCCCCCEEEEecCccHHHHHHHHHHHHcCCEEEEEeCCHHHHHHH-HHcCCCEEEeCC
Confidence             2234678899999999988888899999999996 9999999999999999999998888776555 779999999987


Q ss_pred             CHHHH---HHhc-CCccEEEEcCCCcccHHHHHhccccCCEEEEecCCCCC-------cccChHHHHhCCcEEEecccCC
Q 018067          237 DQDEM---QAAM-GTMDGIIDTVSAVHPLMPLIGLLKSQGKLVLVGAPEKP-------LELPAFSLLMGRKIVGGSMIGG  305 (361)
Q Consensus       237 ~~~~~---~~~~-~g~d~vid~~g~~~~~~~~~~~l~~~G~~v~~g~~~~~-------~~~~~~~~~~~~~~i~g~~~~~  305 (361)
                      +++..   .+.. +++|++||++|+.. +..++++++++|+++.+|.....       .......++.+++++.++....
T Consensus       197 ~~~~~~~v~~~~~~gvd~vld~~g~~~-~~~~~~~l~~~G~iv~~g~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~  275 (329)
T cd08294         197 TVSLEEALKEAAPDGIDCYFDNVGGEF-SSTVLSHMNDFGRVAVCGSISTYNDKEPKKGPYVQETIIFKQLKMEGFIVYR  275 (329)
T ss_pred             CccHHHHHHHHCCCCcEEEEECCCHHH-HHHHHHhhccCCEEEEEcchhccCCCCCCcCcccHHHHhhhcceEEEEEhhh
Confidence            65433   3333 37999999999865 89999999999999999864211       1122335667888988876543


Q ss_pred             H-----HHHHHHHHHHHcCCCceeE-EEEecccHHHHHHHHHcCCCceEEEEEe
Q 018067          306 M-----KETQEMIDFAAKHNIRADI-EVIPADYVNTALERLAKADVRYRFVIDV  353 (361)
Q Consensus       306 ~-----~~~~~~~~ll~~~~~~~~~-~~~~l~~~~~a~~~~~~~~~~gkvvi~~  353 (361)
                      .     +.+++++++++++++++.. .+++++++++|++.+.+++..||+++++
T Consensus       276 ~~~~~~~~~~~~~~l~~~g~i~~~~~~~~~l~~~~~A~~~~~~~~~~gkvvv~~  329 (329)
T cd08294         276 WQDRWPEALKQLLKWIKEGKLKYREHVTEGFENMPQAFIGMLKGENTGKAIVKV  329 (329)
T ss_pred             hHHHHHHHHHHHHHHHHCCCCcCCcccccCHHHHHHHHHHHHcCCCCCeEEEeC
Confidence            2     3467888999999998765 6899999999999999999889999864

Prostaglandins and related eicosanoids are metabolized by the oxidation of the 15(S)-hydroxyl group of the NAD+-dependent (type I 15-PGDH) 15-prostaglandin dehydrogenase (15-PGDH) followed by reduction by NADPH/NADH-dependent (type II 15-PGDH) delta-13 15-prostaglandin reductase (13-PGR) to 15-keto- 13,14,-dihydroprostaglandins. 13-PGR is a bifunctional enzyme, since it also has leukotriene B(4) 12-hydroxydehydrogenase activity. These 15-PGDH and related enzymes are members of the medium chain dehydrogenase/reductase family. The medium chain dehydrogenases/reductase (MDR)/zinc-dependent alcohol dehydrogenase-like family, which contains the zinc-dependent alcohol dehydrogenase (ADH-Zn) and related proteins, is a diverse group of proteins related to the first identified member, class I mammalian ADH. MDRs display a broad range of ac

>cd05281 TDH Threonine dehydrogenase

Probab=100.00  E-value=5e-38  Score=293.08  Aligned_cols=328  Identities=20%  Similarity=0.300  Sum_probs=258.0

Q ss_pred             cceeeeeecCCCCCccceeeccCCCCCCeEEEEEeeeccCcchHHhHhcCC---CCCCCCCcccccccEEEEEeCCCCCC
Q 018067           11 KNAFGWAAKDTSGVLSPFHFSRRATGEKDVTFKVTHCGICHSDLHMIKNEW---GNTIYPIVPGHEIVGVVTEVGSKVSK   87 (361)
Q Consensus        11 ~~~~~~~~~~~~~~l~~~~~~~p~~~~~evlV~v~~~~i~~~D~~~~~g~~---~~~~~p~~lG~e~~G~Vv~vG~~v~~   87 (361)
                      |+++.+..  ..+.+++.+.+.|.++++|++||++++++|+.|++.+.+..   ....+|.++|||++|+|+++|++++.
T Consensus         1 ~~~~~~~~--~~~~~~~~~~~~~~~~~~~v~V~v~~~~~~~~d~~~~~~~~~~~~~~~~~~~~g~e~~G~V~~~G~~v~~   78 (341)
T cd05281           1 MKAIVKTK--AGPGAELVEVPVPKPGPGEVLIKVLAASICGTDVHIYEWDEWAQSRIKPPLIFGHEFAGEVVEVGEGVTR   78 (341)
T ss_pred             CcceEEec--CCCceEEEeCCCCCCCCCeEEEEEEEEEEcccchHHHcCCCCccccCCCCcccccceEEEEEEECCCCCC
Confidence            45555443  22368888999999999999999999999999988765421   12245678999999999999999999


Q ss_pred             CCCCCEEEeccccCCCCCCcccccCCCCCCcchhcccccccCCCCcCCCcceeEEeecCCceEECCCCCCcccccccchh
Q 018067           88 FKVGDKVGVGCMVGSCRSCDSCAIDLENYCPKVIMTYANKYHDGTITYGGYSDIMVADEHFVVRIPEGTPLDATAPLLCA  167 (361)
Q Consensus        88 ~~~GdrV~~~~~~~~c~~c~~c~~~~~~~c~~~~~~~~~~~~~~~~~~g~~a~~v~v~~~~~~~ip~~~~~~~aa~l~~~  167 (361)
                      |++||+|+..+.. +|++|.+|..+.+++|.+.  ++.+     ....|+|++|+.++.+.++++|++++++.+ .+...
T Consensus        79 ~~~Gd~V~~~~~~-~~~~~~~~~~~~~~~~~~~--~~~~-----~~~~g~~~~~v~v~~~~~~~lP~~~~~~~a-~~~~~  149 (341)
T cd05281          79 VKVGDYVSAETHI-VCGKCYQCRTGNYHVCQNT--KILG-----VDTDGCFAEYVVVPEENLWKNDKDIPPEIA-SIQEP  149 (341)
T ss_pred             CCCCCEEEECCcc-CCCCChHHHCcCcccCccc--ceEe-----ccCCCcceEEEEechHHcEECcCCCCHHHh-hhhhH
Confidence            9999999876555 9999999999999999753  3222     235789999999999999999999988544 56667


Q ss_pred             hhhhhhHhhhcCCCCCCCEEEEEcCChHHHHHHHHHHHcCC-eEEEEeCCchhHHHHHHHcCCCEEecCCCHHH--HHHh
Q 018067          168 GITVYSPLRFYGLDKPGMHVGVVGLGGLGHVAVKFAKAMGV-KVTVISTSPSKKSEAIERLGADSFLVSRDQDE--MQAA  244 (361)
Q Consensus       168 ~~ta~~~l~~~~~~~~g~~vlV~Gag~vG~~a~~la~~~g~-~vi~~~~~~~~~~~~~~~~g~~~vv~~~~~~~--~~~~  244 (361)
                      +.++++++.  ...++|++|+|.|+|.+|++++++|+.+|+ +|+++++++++ ..+++++|++++++.+..+.  +.++
T Consensus       150 ~~~a~~~~~--~~~~~g~~vlV~g~g~vg~~~~~la~~~G~~~v~~~~~~~~~-~~~~~~~g~~~~~~~~~~~~~~~~~~  226 (341)
T cd05281         150 LGNAVHTVL--AGDVSGKSVLITGCGPIGLMAIAVAKAAGASLVIASDPNPYR-LELAKKMGADVVINPREEDVVEVKSV  226 (341)
T ss_pred             HHHHHHHHH--hcCCCCCEEEEECCCHHHHHHHHHHHHcCCcEEEEECCCHHH-HHHHHHhCcceeeCcccccHHHHHHH
Confidence            788888775  335799999998889999999999999999 68887555554 45667899988887655333  3333


Q ss_pred             cC--CccEEEEcCCCcccHHHHHhccccCCEEEEecCCCCCcccChH-HHHhCCcEEEecccCC-HHHHHHHHHHHHcCC
Q 018067          245 MG--TMDGIIDTVSAVHPLMPLIGLLKSQGKLVLVGAPEKPLELPAF-SLLMGRKIVGGSMIGG-MKETQEMIDFAAKHN  320 (361)
Q Consensus       245 ~~--g~d~vid~~g~~~~~~~~~~~l~~~G~~v~~g~~~~~~~~~~~-~~~~~~~~i~g~~~~~-~~~~~~~~~ll~~~~  320 (361)
                      ..  ++|++||++|+......++++++++|+++.+|.......++.. .+..+++.+.+..... .+.+.++++++.++.
T Consensus       227 ~~~~~vd~vld~~g~~~~~~~~~~~l~~~G~~v~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~  306 (341)
T cd05281         227 TDGTGVDVVLEMSGNPKAIEQGLKALTPGGRVSILGLPPGPVDIDLNNLVIFKGLTVQGITGRKMFETWYQVSALLKSGK  306 (341)
T ss_pred             cCCCCCCEEEECCCCHHHHHHHHHHhccCCEEEEEccCCCCcccccchhhhccceEEEEEecCCcchhHHHHHHHHHcCC
Confidence            33  7999999999876688999999999999999865443333322 3566778887765322 356788999999999


Q ss_pred             Cce--eE-EEEecccHHHHHHHHHcCCCceEEEEEe
Q 018067          321 IRA--DI-EVIPADYVNTALERLAKADVRYRFVIDV  353 (361)
Q Consensus       321 ~~~--~~-~~~~l~~~~~a~~~~~~~~~~gkvvi~~  353 (361)
                      +++  .+ +.++++++++||+.+.+++ .||+++++
T Consensus       307 l~~~~~~~~~~~~~~~~~a~~~~~~~~-~gk~vv~~  341 (341)
T cd05281         307 VDLSPVITHKLPLEDFEEAFELMRSGK-CGKVVLYP  341 (341)
T ss_pred             CChhHheEEEecHHHHHHHHHHHhcCC-CceEEecC
Confidence            863  33 7899999999999999999 89999864

L-threonine dehydrogenase (TDH) catalyzes the zinc-dependent formation of 2-amino-3-ketobutyrate from L-threonine via NAD(H)- dependent oxidation. THD is a member of the zinc-requiring, medium chain NAD(H)-dependent alcohol dehydrogenase family (MDR). MDRs have a NAD(P)(H)-binding domain in a Rossmann fold of a beta-alpha form. NAD(P)(H)-dependent oxidoreductases are the major enzymes in the interconversion of alcohols and aldehydes, or ketones. The N-terminal region typically has an all-beta catalytic domain. These proteins typically form dimers (typically higher plants, mammals) or tetramers (yeast, bacteria) and have 2 tightly bound zinc atoms per subunit. Sorbitol and aldose reductase are NAD(+) binding proteins of the polyol pathway, which interconverts glucose and fructose.

>TIGR02817 adh_fam_1 zinc-binding alcohol dehydrogenase family protein

Probab=100.00  E-value=8.1e-38  Score=291.01  Aligned_cols=304  Identities=18%  Similarity=0.263  Sum_probs=246.3

Q ss_pred             eeeeeec---CCCCCccceeeccCCCCCCeEEEEEeeeccCcchHHhHhcCCCCCCCCCcccccccEEEEEeCCCCCCCC
Q 018067           13 AFGWAAK---DTSGVLSPFHFSRRATGEKDVTFKVTHCGICHSDLHMIKNEWGNTIYPIVPGHEIVGVVTEVGSKVSKFK   89 (361)
Q Consensus        13 ~~~~~~~---~~~~~l~~~~~~~p~~~~~evlV~v~~~~i~~~D~~~~~g~~~~~~~p~~lG~e~~G~Vv~vG~~v~~~~   89 (361)
                      ++.+...   ++++.++..++|.|+++++||+|||+++++|+.|+..+.+..+...+|.++|+|++|+|+++|++++.|+
T Consensus         2 ~~~~~~~~~~~~~~~~~~~~~~~p~~~~~ev~Ikv~~~~i~~~d~~~~~g~~~~~~~~~~~g~e~~G~V~~vG~~v~~~~   81 (336)
T TIGR02817         2 AVGYKKPLPITDPDALVDIDLPKPKPGGRDLLVEVKAISVNPVDTKVRARMAPEAGQPKILGWDAAGVVVAVGDEVTLFK   81 (336)
T ss_pred             ceeeccccCCCCcccceecccCCCCCCCCEEEEEEEEEEcChHHHHHHcCCCCCCCCCcccceeeEEEEEEeCCCCCCCC
Confidence            4455554   6678899999999999999999999999999999998888665456688999999999999999999999


Q ss_pred             CCCEEEeccccCCCCCCcccccCCCCCCcchhcccccccCCCCcCCCcceeEEeecCCceEECCCCCCcccccccchhhh
Q 018067           90 VGDKVGVGCMVGSCRSCDSCAIDLENYCPKVIMTYANKYHDGTITYGGYSDIMVADEHFVVRIPEGTPLDATAPLLCAGI  169 (361)
Q Consensus        90 ~GdrV~~~~~~~~c~~c~~c~~~~~~~c~~~~~~~~~~~~~~~~~~g~~a~~v~v~~~~~~~ip~~~~~~~aa~l~~~~~  169 (361)
                      +||+|+...                                .....|+|++|+.++.+.++++|+++++++++.+++.+.
T Consensus        82 ~Gd~V~~~~--------------------------------~~~~~g~~~~~~~v~~~~~~~ip~~~~~~~aa~~~~~~~  129 (336)
T TIGR02817        82 PGDEVWYAG--------------------------------DIDRPGSNAEFHLVDERIVGHKPKSLSFAEAAALPLTSI  129 (336)
T ss_pred             CCCEEEEcC--------------------------------CCCCCCcccceEEEcHHHcccCCCCCCHHHHhhhhHHHH
Confidence            999997311                                012468999999999999999999999999999999999


Q ss_pred             hhhhHhhhcCCCCC-----CCEEEEEcC-ChHHHHHHHHHHHc-CCeEEEEeCCchhHHHHHHHcCCCEEecCCC--HHH
Q 018067          170 TVYSPLRFYGLDKP-----GMHVGVVGL-GGLGHVAVKFAKAM-GVKVTVISTSPSKKSEAIERLGADSFLVSRD--QDE  240 (361)
Q Consensus       170 ta~~~l~~~~~~~~-----g~~vlV~Ga-g~vG~~a~~la~~~-g~~vi~~~~~~~~~~~~~~~~g~~~vv~~~~--~~~  240 (361)
                      |||+++....++++     |++|||+|+ |.+|++++|+|+.+ |++|+.+++++++...+ +++|+++++++..  ...
T Consensus       130 ta~~~l~~~~~~~~~~~~~g~~vlV~ga~g~vg~~~~~~ak~~~G~~vi~~~~~~~~~~~l-~~~g~~~~~~~~~~~~~~  208 (336)
T TIGR02817       130 TAWELLFDRLGINDPVAGDKRALLIIGGAGGVGSILIQLARQLTGLTVIATASRPESQEWV-LELGAHHVIDHSKPLKAQ  208 (336)
T ss_pred             HHHHHHHHhcCCCCCCCCCCCEEEEEcCCcHHHHHHHHHHHHhCCCEEEEEcCcHHHHHHH-HHcCCCEEEECCCCHHHH
Confidence            99999987777776     999999997 99999999999998 99999999888877666 7899999887544  223


Q ss_pred             HHHhc-CCccEEEEcCCCcccHHHHHhccccCCEEEEecCCCCCcccChHHHHhCCcEEEecccC-----C-------HH
Q 018067          241 MQAAM-GTMDGIIDTVSAVHPLMPLIGLLKSQGKLVLVGAPEKPLELPAFSLLMGRKIVGGSMIG-----G-------MK  307 (361)
Q Consensus       241 ~~~~~-~g~d~vid~~g~~~~~~~~~~~l~~~G~~v~~g~~~~~~~~~~~~~~~~~~~i~g~~~~-----~-------~~  307 (361)
                      +.+.. +++|+++|++++...+...+++++++|+++.++..   ..++...+..+++++.+....     .       ..
T Consensus       209 i~~~~~~~vd~vl~~~~~~~~~~~~~~~l~~~G~~v~~~~~---~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  285 (336)
T TIGR02817       209 LEKLGLEAVSYVFSLTHTDQHFKEIVELLAPQGRFALIDDP---AELDISPFKRKSISLHWEFMFTRSMFQTADMIEQHH  285 (336)
T ss_pred             HHHhcCCCCCEEEEcCCcHHHHHHHHHHhccCCEEEEEccc---ccccchhhhhcceEEEEEEeecccccchhhhhhhHH
Confidence            33443 37999999987655588999999999999998532   233444444465665543221     0       13


Q ss_pred             HHHHHHHHHHcCCCceeE-EEE---ecccHHHHHHHHHcCCCceEEEEE
Q 018067          308 ETQEMIDFAAKHNIRADI-EVI---PADYVNTALERLAKADVRYRFVID  352 (361)
Q Consensus       308 ~~~~~~~ll~~~~~~~~~-~~~---~l~~~~~a~~~~~~~~~~gkvvi~  352 (361)
                      .++++++++.++++++.+ +.+   +++++++|++.+.+++..||+++.
T Consensus       286 ~~~~~~~l~~~~~l~~~~~~~~~~~~~~~~~~a~~~~~~~~~~gkvvv~  334 (336)
T TIGR02817       286 LLNRVARLVDAGKIRTTLAETFGTINAANLKRAHALIESGKARGKIVLE  334 (336)
T ss_pred             HHHHHHHHHHCCCeeccchhccCCCCHHHHHHHHHHHHcCCccceEEEe
Confidence            478889999999988654 455   478999999999999888998874

Members of this model form a distinct subset of the larger family of oxidoreductases that includes zinc-binding alcohol dehydrogenases and NADPH:quinone reductases (pfam00107). While some current members of this family carry designations as putative alginate lyase, it seems no sequence with a direct characterization as such is detected by this model.

>cd08234 threonine_DH_like L-threonine dehydrogenase

Probab=100.00  E-value=2.7e-37  Score=287.27  Aligned_cols=324  Identities=27%  Similarity=0.416  Sum_probs=266.7

Q ss_pred             cceeeeeecCCCCCccceeeccCCCCCCeEEEEEeeeccCcchHHhHhcCCCCCCCCCcccccccEEEEEeCCCCCCCCC
Q 018067           11 KNAFGWAAKDTSGVLSPFHFSRRATGEKDVTFKVTHCGICHSDLHMIKNEWGNTIYPIVPGHEIVGVVTEVGSKVSKFKV   90 (361)
Q Consensus        11 ~~~~~~~~~~~~~~l~~~~~~~p~~~~~evlV~v~~~~i~~~D~~~~~g~~~~~~~p~~lG~e~~G~Vv~vG~~v~~~~~   90 (361)
                      |+++.+.   +++.+++.+++.|+++++||+||++++++|+.|+....|..+. .+|.++|+|++|+|+++|+++++|++
T Consensus         1 ~~a~~~~---~~~~~~~~~~~~~~l~~~~v~v~v~~~~l~~~d~~~~~g~~~~-~~p~~~g~~~~G~v~~vG~~v~~~~~   76 (334)
T cd08234           1 MKALVYE---GPGELEVEEVPVPEPGPDEVLIKVAACGICGTDLHIYEGEFGA-APPLVPGHEFAGVVVAVGSKVTGFKV   76 (334)
T ss_pred             CeeEEec---CCCceEEEeccCCCCCCCeEEEEEEEEeEchhhhHHhcCCCCC-CCCcccccceEEEEEEeCCCCCCCCC
Confidence            4555543   4457888899999999999999999999999999998887653 47889999999999999999999999


Q ss_pred             CCEEEeccccCCCCCCcccccCCCCCCcchhcccccccCCCCcCCCcceeEEeecCCceEECCCCCCcccccccchhhhh
Q 018067           91 GDKVGVGCMVGSCRSCDSCAIDLENYCPKVIMTYANKYHDGTITYGGYSDIMVADEHFVVRIPEGTPLDATAPLLCAGIT  170 (361)
Q Consensus        91 GdrV~~~~~~~~c~~c~~c~~~~~~~c~~~~~~~~~~~~~~~~~~g~~a~~v~v~~~~~~~ip~~~~~~~aa~l~~~~~t  170 (361)
                      ||+|+..+.. .|++|.+|..+..++|.....       .+....|+|++|+.++.+.++++|+++++.+++.+ +.+.+
T Consensus        77 Gd~V~~~~~~-~~~~~~~~~~~~~~~~~~~~~-------~~~~~~g~~~~~~~v~~~~~~~lP~~~~~~~aa~~-~~~~~  147 (334)
T cd08234          77 GDRVAVDPNI-YCGECFYCRRGRPNLCENLTA-------VGVTRNGGFAEYVVVPAKQVYKIPDNLSFEEAALA-EPLSC  147 (334)
T ss_pred             CCEEEEcCCc-CCCCCccccCcChhhCCCcce-------eccCCCCcceeEEEecHHHcEECcCCCCHHHHhhh-hHHHH
Confidence            9999877766 699999999999999987632       12235799999999999999999999999998766 67788


Q ss_pred             hhhHhhhcCCCCCCCEEEEEcCChHHHHHHHHHHHcCCe-EEEEeCCchhHHHHHHHcCCCEEecCCCHHHH--HHhc-C
Q 018067          171 VYSPLRFYGLDKPGMHVGVVGLGGLGHVAVKFAKAMGVK-VTVISTSPSKKSEAIERLGADSFLVSRDQDEM--QAAM-G  246 (361)
Q Consensus       171 a~~~l~~~~~~~~g~~vlV~Gag~vG~~a~~la~~~g~~-vi~~~~~~~~~~~~~~~~g~~~vv~~~~~~~~--~~~~-~  246 (361)
                      +++++ ...++++|++|+|+|+|.+|++++++|+..|++ ++++++++++...+ +++|++.++++.+.+..  +... .
T Consensus       148 a~~~l-~~~~~~~g~~vlI~g~g~vg~~~~~la~~~G~~~v~~~~~~~~~~~~~-~~~g~~~~~~~~~~~~~~~~~~~~~  225 (334)
T cd08234         148 AVHGL-DLLGIKPGDSVLVFGAGPIGLLLAQLLKLNGASRVTVAEPNEEKLELA-KKLGATETVDPSREDPEAQKEDNPY  225 (334)
T ss_pred             HHHHH-HhcCCCCCCEEEEECCCHHHHHHHHHHHHcCCcEEEEECCCHHHHHHH-HHhCCeEEecCCCCCHHHHHHhcCC
Confidence            99888 566789999999998899999999999999997 77777777766555 78898888877654322  2222 3


Q ss_pred             CccEEEEcCCCcccHHHHHhccccCCEEEEecCCCC--CcccChHHHHhCCcEEEecccCCHHHHHHHHHHHHcCCCcee
Q 018067          247 TMDGIIDTVSAVHPLMPLIGLLKSQGKLVLVGAPEK--PLELPAFSLLMGRKIVGGSMIGGMKETQEMIDFAAKHNIRAD  324 (361)
Q Consensus       247 g~d~vid~~g~~~~~~~~~~~l~~~G~~v~~g~~~~--~~~~~~~~~~~~~~~i~g~~~~~~~~~~~~~~ll~~~~~~~~  324 (361)
                      ++|++||++|....+..++++++++|+++.+|....  ...+....++.+++++.+... ..+.++++++++.++++++.
T Consensus       226 ~vd~v~~~~~~~~~~~~~~~~l~~~G~~v~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~-~~~~~~~~~~~~~~~~l~~~  304 (334)
T cd08234         226 GFDVVIEATGVPKTLEQAIEYARRGGTVLVFGVYAPDARVSISPFEIFQKELTIIGSFI-NPYTFPRAIALLESGKIDVK  304 (334)
T ss_pred             CCcEEEECCCChHHHHHHHHHHhcCCEEEEEecCCCCCCcccCHHHHHhCCcEEEEecc-CHHHHHHHHHHHHcCCCChh
Confidence            799999999876668899999999999999987543  344555555668888888765 35678899999999998742


Q ss_pred             --E-EEEecccHHHHHHHHHcCCCceEEEE
Q 018067          325 --I-EVIPADYVNTALERLAKADVRYRFVI  351 (361)
Q Consensus       325 --~-~~~~l~~~~~a~~~~~~~~~~gkvvi  351 (361)
                        + .++++++++++++.+.+ +..||+++
T Consensus       305 ~~~~~~~~~~~~~~a~~~~~~-~~~~k~vi  333 (334)
T cd08234         305 GLVSHRLPLEEVPEALEGMRS-GGALKVVV  333 (334)
T ss_pred             hhEEEEecHHHHHHHHHHHhc-CCceEEEe
Confidence              3 78999999999999998 66799886

L-threonine dehydrogenase (TDH) catalyzes the zinc-dependent formation of 2-amino-3-ketobutyrate from L-threonine, via NAD(H)-dependent oxidation. THD is a member of the zinc-requiring, medium chain NAD(H)-dependent alcohol dehydrogenase family (MDR). MDRs have a NAD(P)(H)-binding domain in a Rossmann fold of a beta-alpha form. NAD(P)(H)-dependent oxidoreductases are the major enzymes in the interconversion of alcohols and aldehydes, or ketones. The N-terminal region typically has an all-beta catalytic domain. These proteins typically form dimers (typically higher plants, mammals) or tetramers (yeast, bacteria), and have 2 tightly bound zinc atoms per subunit. Sorbitol and aldose reductase are NAD(+) binding proteins of the polyol pathway, which interconverts glucose and fructose.

>cd08290 ETR 2-enoyl thioester reductase (ETR)

Probab=100.00  E-value=1e-37  Score=290.95  Aligned_cols=307  Identities=22%  Similarity=0.277  Sum_probs=253.4

Q ss_pred             cceeeeeecCCC-CCccceeeccCCCCC-CeEEEEEeeeccCcchHHhHhcCCCCC-C----CCCcccccccEEEEEeCC
Q 018067           11 KNAFGWAAKDTS-GVLSPFHFSRRATGE-KDVTFKVTHCGICHSDLHMIKNEWGNT-I----YPIVPGHEIVGVVTEVGS   83 (361)
Q Consensus        11 ~~~~~~~~~~~~-~~l~~~~~~~p~~~~-~evlV~v~~~~i~~~D~~~~~g~~~~~-~----~p~~lG~e~~G~Vv~vG~   83 (361)
                      |+++.+...+.| +.+.++++|.|.+.+ +||+||+.++++|++|+..+.|..+.. .    +|.++|||++|+|+++|+
T Consensus         1 ~~a~~~~~~~~~~~~~~~~~~~~p~~~~~~~v~v~v~~~gi~~~d~~~~~g~~~~~~~~~~~~~~~~g~e~~G~V~~vG~   80 (341)
T cd08290           1 AKALVYTEHGEPKEVLQLESYEIPPPGPPNEVLVKMLAAPINPADINQIQGVYPIKPPTTPEPPAVGGNEGVGEVVKVGS   80 (341)
T ss_pred             CceEEEccCCCchhheEEeecCCCCCCCCCEEEEEEEecCCCHHHHHHhcCcCCCCCcccCCCCCCCCcceEEEEEEeCC
Confidence            677777665444 357888999999888 999999999999999999988865422 2    577999999999999999


Q ss_pred             CCCCCCCCCEEEeccccCCCCCCcccccCCCCCCcchhcccccccCCCCcCCCcceeEEeecCCceEECCCCCCcccccc
Q 018067           84 KVSKFKVGDKVGVGCMVGSCRSCDSCAIDLENYCPKVIMTYANKYHDGTITYGGYSDIMVADEHFVVRIPEGTPLDATAP  163 (361)
Q Consensus        84 ~v~~~~~GdrV~~~~~~~~c~~c~~c~~~~~~~c~~~~~~~~~~~~~~~~~~g~~a~~v~v~~~~~~~ip~~~~~~~aa~  163 (361)
                      ++..|++||+|+...                                  ...|+|++|+.++.+.++++|+++++++++.
T Consensus        81 ~v~~~~~Gd~V~~~~----------------------------------~~~g~~~~~~~v~~~~~~~lp~~~~~~~aa~  126 (341)
T cd08290          81 GVKSLKPGDWVIPLR----------------------------------PGLGTWRTHAVVPADDLIKVPNDVDPEQAAT  126 (341)
T ss_pred             CCCCCCCCCEEEecC----------------------------------CCCccchheEeccHHHeEeCCCCCCHHHHHH
Confidence            999999999997421                                  1258999999999999999999999999999


Q ss_pred             cchhhhhhhhHhhhcCCCCCCCEEEEEcC-ChHHHHHHHHHHHcCCeEEEEeCCc----hhHHHHHHHcCCCEEecCCCH
Q 018067          164 LLCAGITVYSPLRFYGLDKPGMHVGVVGL-GGLGHVAVKFAKAMGVKVTVISTSP----SKKSEAIERLGADSFLVSRDQ  238 (361)
Q Consensus       164 l~~~~~ta~~~l~~~~~~~~g~~vlV~Ga-g~vG~~a~~la~~~g~~vi~~~~~~----~~~~~~~~~~g~~~vv~~~~~  238 (361)
                      +++.+.|||+++.....+++|++|||+|+ |.+|++++++|++.|++++++++++    +++..+ +++|++.+++++..
T Consensus       127 ~~~~~~ta~~~l~~~~~~~~g~~vlI~g~~g~vg~~~~~~a~~~g~~v~~~~~~~~~~~~~~~~~-~~~g~~~~~~~~~~  205 (341)
T cd08290         127 LSVNPCTAYRLLEDFVKLQPGDWVIQNGANSAVGQAVIQLAKLLGIKTINVVRDRPDLEELKERL-KALGADHVLTEEEL  205 (341)
T ss_pred             hhccHHHHHHHHHhhcccCCCCEEEEccchhHHHHHHHHHHHHcCCeEEEEEcCCCcchhHHHHH-HhcCCCEEEeCccc
Confidence            99999999999988777899999999987 9999999999999999999998876    445444 78999998887653


Q ss_pred             ---H---HHHHhcC-CccEEEEcCCCcccHHHHHhccccCCEEEEecCCCC-CcccChHHHHhCCcEEEecccCCH----
Q 018067          239 ---D---EMQAAMG-TMDGIIDTVSAVHPLMPLIGLLKSQGKLVLVGAPEK-PLELPAFSLLMGRKIVGGSMIGGM----  306 (361)
Q Consensus       239 ---~---~~~~~~~-g~d~vid~~g~~~~~~~~~~~l~~~G~~v~~g~~~~-~~~~~~~~~~~~~~~i~g~~~~~~----  306 (361)
                         +   .+..... ++|++||++|+.. +..++++++++|+++.+|.... ...++....+.++.++.++.....    
T Consensus       206 ~~~~~~~~i~~~~~~~~d~vld~~g~~~-~~~~~~~l~~~G~~v~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  284 (341)
T cd08290         206 RSLLATELLKSAPGGRPKLALNCVGGKS-ATELARLLSPGGTMVTYGGMSGQPVTVPTSLLIFKDITLRGFWLTRWLKRA  284 (341)
T ss_pred             ccccHHHHHHHHcCCCceEEEECcCcHh-HHHHHHHhCCCCEEEEEeccCCCCcccCHHHHhhCCceEEEEecHHHHhhc
Confidence               2   2333333 6999999999876 7789999999999999986432 334555555778999988765332    


Q ss_pred             ------HHHHHHHHHHHcCCCceeE-EEE---ecccHHHHHHHHHcCCCceEEEEEe
Q 018067          307 ------KETQEMIDFAAKHNIRADI-EVI---PADYVNTALERLAKADVRYRFVIDV  353 (361)
Q Consensus       307 ------~~~~~~~~ll~~~~~~~~~-~~~---~l~~~~~a~~~~~~~~~~gkvvi~~  353 (361)
                            ..++.+++++.++++++.. +.+   ++++++++++.+.+++..||+++.+
T Consensus       285 ~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~a~~~~~~~~~~~k~v~~~  341 (341)
T cd08290         285 NPEEKEDMLEELAELIREGKLKAPPVEKVTDDPLEEFKDALANALKGGGGGKQVLVM  341 (341)
T ss_pred             CHHHHHHHHHHHHHHHHcCCccCCcccccccCCHHHHHHHHHHHhhcCCCCeEEEeC
Confidence                  2477888999999988755 677   9999999999999988889999864

2-enoyl thioester reductase (ETR) catalyzes the NADPH-dependent conversion of trans-2-enoyl acyl carrier protein/coenzyme A (ACP/CoA) to acyl-(ACP/CoA) in fatty acid synthesis. 2-enoyl thioester reductase activity has been linked in Candida tropicalis as essential in maintaining mitiochondrial respiratory function. This ETR family is a part of the medium chain dehydrogenase/reductase family, but lack the zinc coordination sites characteristic of the alcohol dehydrogenases in this family. NAD(P)(H)-dependent oxidoreductases are the major enzymes in the interconversion of alcohols and aldehydes, or ketones. Alcohol dehydrogenase in the liver converts ethanol and NAD+ to acetaldehyde and NADH, while in yeast and some other microorganisms ADH catalyzes the conversion acetaldehyde to ethanol in alcoholic fermentation. ADH is a member of the medium chain alcohol dehydrogenase family (MDR), which has a NAD(P)(H)-binding domain in a Rossmann f

>TIGR00692 tdh L-threonine 3-dehydrogenase

Probab=100.00  E-value=2.8e-37  Score=287.95  Aligned_cols=318  Identities=19%  Similarity=0.266  Sum_probs=254.0

Q ss_pred             CCccceeeccCCCCCCeEEEEEeeeccCcchHHhHhcCC---CCCCCCCcccccccEEEEEeCCCCCCCCCCCEEEeccc
Q 018067           23 GVLSPFHFSRRATGEKDVTFKVTHCGICHSDLHMIKNEW---GNTIYPIVPGHEIVGVVTEVGSKVSKFKVGDKVGVGCM   99 (361)
Q Consensus        23 ~~l~~~~~~~p~~~~~evlV~v~~~~i~~~D~~~~~g~~---~~~~~p~~lG~e~~G~Vv~vG~~v~~~~~GdrV~~~~~   99 (361)
                      ..++++++|.|.++++|++||+.++++|++|+..+.+..   ....+|.++|+|++|+|+++|+++++|++||+|+..++
T Consensus         9 ~~~~l~~~~~p~~~~~ev~V~v~~~~~~~~d~~~~~~~~~~~~~~~~~~~~g~e~~G~V~~vG~~v~~~~~Gd~V~~~~~   88 (340)
T TIGR00692         9 YGAELTEVPVPEPGPGEVLIKVLATSICGTDVHIYNWDEWAQSRIKPPQVVGHEVAGEVVGIGPGVEGIKVGDYVSVETH   88 (340)
T ss_pred             CCcEEEECCCCCCCCCeEEEEEEEEEEcccCHHHHcCCCCCCCCCCCCcccccceEEEEEEECCCCCcCCCCCEEEECCc
Confidence            347788899999999999999999999999998876531   12235668999999999999999999999999987655


Q ss_pred             cCCCCCCcccccCCCCCCcchhcccccccCCCCcCCCcceeEEeecCCceEECCCCCCcccccccchhhhhhhhHhhhcC
Q 018067          100 VGSCRSCDSCAIDLENYCPKVIMTYANKYHDGTITYGGYSDIMVADEHFVVRIPEGTPLDATAPLLCAGITVYSPLRFYG  179 (361)
Q Consensus       100 ~~~c~~c~~c~~~~~~~c~~~~~~~~~~~~~~~~~~g~~a~~v~v~~~~~~~ip~~~~~~~aa~l~~~~~ta~~~l~~~~  179 (361)
                      + .|+.|..|..+...+|++..+.       +....|+|++|++++.+.++++|+++++++| +++..+.+||+++.  .
T Consensus        89 ~-~~~~~~~~~~~~~~~~~~~~~~-------~~~~~g~~~~~~~~~~~~~~~lp~~~~~~~a-~~~~~~~~a~~~~~--~  157 (340)
T TIGR00692        89 I-VCGKCYACRRGQYHVCQNTKIF-------GVDTDGCFAEYAVVPAQNIWKNPKSIPPEYA-TIQEPLGNAVHTVL--A  157 (340)
T ss_pred             C-CCCCChhhhCcChhhCcCcceE-------eecCCCcceeEEEeehHHcEECcCCCChHhh-hhcchHHHHHHHHH--c
Confidence            4 8999999999999999986321       2235789999999999999999999998655 56677888888763  3


Q ss_pred             CCCCCCEEEEEcCChHHHHHHHHHHHcCCe-EEEEeCCchhHHHHHHHcCCCEEecCCCHH---HHHHhc--CCccEEEE
Q 018067          180 LDKPGMHVGVVGLGGLGHVAVKFAKAMGVK-VTVISTSPSKKSEAIERLGADSFLVSRDQD---EMQAAM--GTMDGIID  253 (361)
Q Consensus       180 ~~~~g~~vlV~Gag~vG~~a~~la~~~g~~-vi~~~~~~~~~~~~~~~~g~~~vv~~~~~~---~~~~~~--~g~d~vid  253 (361)
                      ..++|++++|.|+|.+|++++|+|+.+|++ |+++.++ +++..+++++|++.++++...+   .+.++.  .++|++||
T Consensus       158 ~~~~g~~vlI~~~g~vg~~a~~la~~~G~~~v~~~~~~-~~~~~~~~~~g~~~~v~~~~~~~~~~l~~~~~~~~~d~vld  236 (340)
T TIGR00692       158 GPISGKSVLVTGAGPIGLMAIAVAKASGAYPVIVSDPN-EYRLELAKKMGATYVVNPFKEDVVKEVADLTDGEGVDVFLE  236 (340)
T ss_pred             cCCCCCEEEEECCCHHHHHHHHHHHHcCCcEEEEECCC-HHHHHHHHHhCCcEEEcccccCHHHHHHHhcCCCCCCEEEE
Confidence            467999999988899999999999999997 7777454 4445566889998888776543   333343  37999999


Q ss_pred             cCCCcccHHHHHhccccCCEEEEecCCCCCcccChH-HHHhCCcEEEecccC-CHHHHHHHHHHHHcCCCc--eeE-EEE
Q 018067          254 TVSAVHPLMPLIGLLKSQGKLVLVGAPEKPLELPAF-SLLMGRKIVGGSMIG-GMKETQEMIDFAAKHNIR--ADI-EVI  328 (361)
Q Consensus       254 ~~g~~~~~~~~~~~l~~~G~~v~~g~~~~~~~~~~~-~~~~~~~~i~g~~~~-~~~~~~~~~~ll~~~~~~--~~~-~~~  328 (361)
                      ++|+...+...+++++++|+++.+|.......++.. .++.+++++.+.... ..+.+.++++++.+++++  +.+ +.+
T Consensus       237 ~~g~~~~~~~~~~~l~~~g~~v~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~l~~~~~~~~~~  316 (340)
T TIGR00692       237 MSGAPKALEQGLQAVTPGGRVSLLGLPPGKVTIDFTNKVIFKGLTIYGITGRHMFETWYTVSRLIQSGKLDLDPIITHKF  316 (340)
T ss_pred             CCCCHHHHHHHHHhhcCCCEEEEEccCCCCcccchhhhhhhcceEEEEEecCCchhhHHHHHHHHHcCCCChHHheeeee
Confidence            999766688999999999999999975433333333 456678888775432 235678899999999987  333 899


Q ss_pred             ecccHHHHHHHHHcCCCceEEEEEe
Q 018067          329 PADYVNTALERLAKADVRYRFVIDV  353 (361)
Q Consensus       329 ~l~~~~~a~~~~~~~~~~gkvvi~~  353 (361)
                      ++++++++++.+.+++ .||+++.+
T Consensus       317 ~l~~~~~a~~~~~~~~-~gkvvv~~  340 (340)
T TIGR00692       317 KFDKFEKGFELMRSGQ-TGKVILSL  340 (340)
T ss_pred             eHHHHHHHHHHHhcCC-CceEEEeC
Confidence            9999999999999887 49999864

E. coli His-90 modulates substrate specificity and is believed part of the active site.

>cd08276 MDR7 Medium chain dehydrogenases/reductase (MDR)/zinc-dependent alcohol dehydrogenase-like family

Probab=100.00  E-value=8.7e-37  Score=283.69  Aligned_cols=327  Identities=26%  Similarity=0.315  Sum_probs=268.9

Q ss_pred             cceeeeeecCCCCCccceeeccCCCCCCeEEEEEeeeccCcchHHhHhcCCCC-CCCCCcccccccEEEEEeCCCCCCCC
Q 018067           11 KNAFGWAAKDTSGVLSPFHFSRRATGEKDVTFKVTHCGICHSDLHMIKNEWGN-TIYPIVPGHEIVGVVTEVGSKVSKFK   89 (361)
Q Consensus        11 ~~~~~~~~~~~~~~l~~~~~~~p~~~~~evlV~v~~~~i~~~D~~~~~g~~~~-~~~p~~lG~e~~G~Vv~vG~~v~~~~   89 (361)
                      |+++++...+.+..+++++.+.|.++++|++|++.++++|++|++...|.++. ...|.++|||++|+|+++|+.+.+|+
T Consensus         1 ~~a~~~~~~~~~~~~~~~~~~~~~~~~~~v~i~v~~~~i~~~d~~~~~g~~~~~~~~~~~~g~e~~G~v~~~G~~~~~~~   80 (336)
T cd08276           1 MKAWRLSGGGGLDNLKLVEEPVPEPGPGEVLVRVHAVSLNYRDLLILNGRYPPPVKDPLIPLSDGAGEVVAVGEGVTRFK   80 (336)
T ss_pred             CeEEEEeccCCCcceEEEeccCCCCCCCeEEEEEEEEecCHHHHHHhcCCCCCCCCCCcccccceeEEEEEeCCCCcCCC
Confidence            67777776555677888888888899999999999999999999988876542 24577899999999999999999999


Q ss_pred             CCCEEEeccccCCCCCCcccccCCCCCCcchhcccccccCCCCcCCCcceeEEeecCCceEECCCCCCcccccccchhhh
Q 018067           90 VGDKVGVGCMVGSCRSCDSCAIDLENYCPKVIMTYANKYHDGTITYGGYSDIMVADEHFVVRIPEGTPLDATAPLLCAGI  169 (361)
Q Consensus        90 ~GdrV~~~~~~~~c~~c~~c~~~~~~~c~~~~~~~~~~~~~~~~~~g~~a~~v~v~~~~~~~ip~~~~~~~aa~l~~~~~  169 (361)
                      +||+|+...+. .|+      .+.+..|....+       .|....|+|++|+.++.+.++++|+++++.+++.+++.+.
T Consensus        81 ~Gd~V~~~~~~-~~~------~~~~~~~~~~~~-------~~~~~~g~~~~~~~~~~~~~~~lp~~~~~~~a~~~~~~~~  146 (336)
T cd08276          81 VGDRVVPTFFP-NWL------DGPPTAEDEASA-------LGGPIDGVLAEYVVLPEEGLVRAPDHLSFEEAATLPCAGL  146 (336)
T ss_pred             CCCEEEEeccc-ccc------cccccccccccc-------cccccCceeeeEEEecHHHeEECCCCCCHHHhhhhhHHHH
Confidence            99999865432 333      333344433211       1234578999999999999999999999999999999999


Q ss_pred             hhhhHhhhcCCCCCCCEEEEEcCChHHHHHHHHHHHcCCeEEEEeCCchhHHHHHHHcCCCEEecCCC-HH---HHHHhc
Q 018067          170 TVYSPLRFYGLDKPGMHVGVVGLGGLGHVAVKFAKAMGVKVTVISTSPSKKSEAIERLGADSFLVSRD-QD---EMQAAM  245 (361)
Q Consensus       170 ta~~~l~~~~~~~~g~~vlV~Gag~vG~~a~~la~~~g~~vi~~~~~~~~~~~~~~~~g~~~vv~~~~-~~---~~~~~~  245 (361)
                      +||+++.....+++|++|+|+|+|++|++++++++++|++|++++++++++..+ +++|++.+++.+. ++   .+....
T Consensus       147 ~a~~~l~~~~~~~~g~~vli~g~g~~g~~~~~~a~~~G~~v~~~~~~~~~~~~~-~~~g~~~~~~~~~~~~~~~~~~~~~  225 (336)
T cd08276         147 TAWNALFGLGPLKPGDTVLVQGTGGVSLFALQFAKAAGARVIATSSSDEKLERA-KALGADHVINYRTTPDWGEEVLKLT  225 (336)
T ss_pred             HHHHHHHhhcCCCCCCEEEEECCcHHHHHHHHHHHHcCCEEEEEeCCHHHHHHH-HHcCCCEEEcCCcccCHHHHHHHHc
Confidence            999999888888999999999889999999999999999999999888877666 5689988887765 32   344444


Q ss_pred             C--CccEEEEcCCCcccHHHHHhccccCCEEEEecCCCCC-cccChHHHHhCCcEEEecccCCHHHHHHHHHHHHcCCCc
Q 018067          246 G--TMDGIIDTVSAVHPLMPLIGLLKSQGKLVLVGAPEKP-LELPAFSLLMGRKIVGGSMIGGMKETQEMIDFAAKHNIR  322 (361)
Q Consensus       246 ~--g~d~vid~~g~~~~~~~~~~~l~~~G~~v~~g~~~~~-~~~~~~~~~~~~~~i~g~~~~~~~~~~~~~~ll~~~~~~  322 (361)
                      .  ++|++||+++... +..++++++++|+++.+|..... ........+.+++++.+......+.++++++++.++.+.
T Consensus       226 ~~~~~d~~i~~~~~~~-~~~~~~~l~~~G~~v~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~l~  304 (336)
T cd08276         226 GGRGVDHVVEVGGPGT-LAQSIKAVAPGGVISLIGFLSGFEAPVLLLPLLTKGATLRGIAVGSRAQFEAMNRAIEAHRIR  304 (336)
T ss_pred             CCCCCcEEEECCChHH-HHHHHHhhcCCCEEEEEccCCCCccCcCHHHHhhcceEEEEEecCcHHHHHHHHHHHHcCCcc
Confidence            3  7999999998765 88999999999999999975432 244556667899999998877778899999999998887


Q ss_pred             eeE-EEEecccHHHHHHHHHcCCCceEEEEEe
Q 018067          323 ADI-EVIPADYVNTALERLAKADVRYRFVIDV  353 (361)
Q Consensus       323 ~~~-~~~~l~~~~~a~~~~~~~~~~gkvvi~~  353 (361)
                      +.. +.+++++++++++.+.+++..+|+++.+
T Consensus       305 ~~~~~~~~~~~~~~a~~~~~~~~~~~kvv~~~  336 (336)
T cd08276         305 PVIDRVFPFEEAKEAYRYLESGSHFGKVVIRV  336 (336)
T ss_pred             cccCcEEeHHHHHHHHHHHHhCCCCceEEEeC
Confidence            655 8999999999999999888889998753

This group is a member of the medium chain dehydrogenases/reductase (MDR)/zinc-dependent alcohol dehydrogenase-like family, but lacks the zinc-binding sites of the zinc-dependent alcohol dehydrogenases. The medium chain dehydrogenases/reductase (MDR)/zinc-dependent alcohol dehydrogenase-like family, which contains the zinc-dependent alcohol dehydrogenase (ADH-Zn) and related proteins, is a diverse group of proteins related to the first identified member, class I mammalian ADH. MDRs display a broad range of activities and are distinguished from the smaller short chain dehydrogenases (~ 250 amino acids vs. the ~ 350 amino acids of the MDR). The MDR proteins have 2 domains: a C-terminal NAD(P)-binding Rossmann fold domain of a beta-alpha form and an N-terminal catalytic domain with distant homology to GroES. The MDR group contains a host of activities, including the founding alcoh

>PRK10754 quinone oxidoreductase, NADPH-dependent; Provisional

Probab=100.00  E-value=2.5e-37  Score=286.62  Aligned_cols=307  Identities=23%  Similarity=0.287  Sum_probs=251.6

Q ss_pred             ccceeeeeecCCCCCccceeeccCCCCCCeEEEEEeeeccCcchHHhHhcCCCCCCCCCcccccccEEEEEeCCCCCCCC
Q 018067           10 PKNAFGWAAKDTSGVLSPFHFSRRATGEKDVTFKVTHCGICHSDLHMIKNEWGNTIYPIVPGHEIVGVVTEVGSKVSKFK   89 (361)
Q Consensus        10 ~~~~~~~~~~~~~~~l~~~~~~~p~~~~~evlV~v~~~~i~~~D~~~~~g~~~~~~~p~~lG~e~~G~Vv~vG~~v~~~~   89 (361)
                      +|+++.+...+.+..+++++++.|.++++||+||+.++|+|++|++...|.++...+|.++|||++|+|+.+|++++.++
T Consensus         1 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ev~i~v~~~gi~~~d~~~~~g~~~~~~~~~~~g~e~~G~v~~vG~~v~~~~   80 (327)
T PRK10754          1 MAKRIEFHKHGGPEVLQAVEFTPADPAENEVQVENKAIGINYIDTYIRSGLYPPPSLPSGLGTEAAGVVSKVGSGVKHIK   80 (327)
T ss_pred             CceEEEEeccCChhHeEEeeccCCCCCCCEEEEEEEEEEcCHHHhhhcCCCCCCCCCCCccCcceEEEEEEeCCCCCCCC
Confidence            47888888777788899999999999999999999999999999999888765556688999999999999999999999


Q ss_pred             CCCEEEeccccCCCCCCcccccCCCCCCcchhcccccccCCCCcCCCcceeEEeecCCceEECCCCCCcccccccchhhh
Q 018067           90 VGDKVGVGCMVGSCRSCDSCAIDLENYCPKVIMTYANKYHDGTITYGGYSDIMVADEHFVVRIPEGTPLDATAPLLCAGI  169 (361)
Q Consensus        90 ~GdrV~~~~~~~~c~~c~~c~~~~~~~c~~~~~~~~~~~~~~~~~~g~~a~~v~v~~~~~~~ip~~~~~~~aa~l~~~~~  169 (361)
                      +||+|+..                                  ....|+|++|+.++.+.++++|+++++++++.+++.+.
T Consensus        81 ~Gd~V~~~----------------------------------~~~~g~~~~~v~v~~~~~~~lp~~~~~~~~~~~~~~~~  126 (327)
T PRK10754         81 VGDRVVYA----------------------------------QSALGAYSSVHNVPADKAAILPDAISFEQAAASFLKGL  126 (327)
T ss_pred             CCCEEEEC----------------------------------CCCCcceeeEEEcCHHHceeCCCCCCHHHHHHHHHHHH
Confidence            99999631                                  12358899999999999999999999999999999999


Q ss_pred             hhhhHhhhcCCCCCCCEEEEEcC-ChHHHHHHHHHHHcCCeEEEEeCCchhHHHHHHHcCCCEEecCCCHH---HHHHhc
Q 018067          170 TVYSPLRFYGLDKPGMHVGVVGL-GGLGHVAVKFAKAMGVKVTVISTSPSKKSEAIERLGADSFLVSRDQD---EMQAAM  245 (361)
Q Consensus       170 ta~~~l~~~~~~~~g~~vlV~Ga-g~vG~~a~~la~~~g~~vi~~~~~~~~~~~~~~~~g~~~vv~~~~~~---~~~~~~  245 (361)
                      +||.++.....+++|++|+|+|+ |.+|++++++|+.+|++|+.++++++++..+ +++|++.+++.+..+   .+..++
T Consensus       127 ta~~~l~~~~~~~~g~~vlI~g~~g~ig~~~~~lak~~G~~v~~~~~~~~~~~~~-~~~g~~~~~~~~~~~~~~~~~~~~  205 (327)
T PRK10754        127 TVYYLLRKTYEIKPDEQFLFHAAAGGVGLIACQWAKALGAKLIGTVGSAQKAQRA-KKAGAWQVINYREENIVERVKEIT  205 (327)
T ss_pred             HHHHHHHhhcCCCCCCEEEEEeCCcHHHHHHHHHHHHcCCEEEEEeCCHHHHHHH-HHCCCCEEEcCCCCcHHHHHHHHc
Confidence            99999888888899999999975 9999999999999999999999888877666 789998888776543   333444


Q ss_pred             C--CccEEEEcCCCcccHHHHHhccccCCEEEEecCCCCC-cccChHHHHhCCc------EEEecccCCH----HHHHHH
Q 018067          246 G--TMDGIIDTVSAVHPLMPLIGLLKSQGKLVLVGAPEKP-LELPAFSLLMGRK------IVGGSMIGGM----KETQEM  312 (361)
Q Consensus       246 ~--g~d~vid~~g~~~~~~~~~~~l~~~G~~v~~g~~~~~-~~~~~~~~~~~~~------~i~g~~~~~~----~~~~~~  312 (361)
                      .  ++|++||++|+.. ....+++++++|+++.+|..... ..+....+..++.      .+.+. ....    +.++++
T Consensus       206 ~~~~~d~vl~~~~~~~-~~~~~~~l~~~g~~v~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~~~~~~~~~~~~~~  283 (327)
T PRK10754        206 GGKKVRVVYDSVGKDT-WEASLDCLQRRGLMVSFGNASGPVTGVNLGILNQKGSLYVTRPSLQGY-ITTREELTEASNEL  283 (327)
T ss_pred             CCCCeEEEEECCcHHH-HHHHHHHhccCCEEEEEccCCCCCCCcCHHHHhccCceEEecceeecc-cCCHHHHHHHHHHH
Confidence            3  6999999999865 88899999999999999865432 2233333222221      12222 1122    235568


Q ss_pred             HHHHHcCCCcee---EEEEecccHHHHHHHHHcCCCceEEEEEe
Q 018067          313 IDFAAKHNIRAD---IEVIPADYVNTALERLAKADVRYRFVIDV  353 (361)
Q Consensus       313 ~~ll~~~~~~~~---~~~~~l~~~~~a~~~~~~~~~~gkvvi~~  353 (361)
                      ++++.++++++.   .+.|++++++++++.+.+++..+|+|+.+
T Consensus       284 ~~~l~~g~l~~~~~~~~~~~~~~~~~a~~~~~~~~~~~~~~~~~  327 (327)
T PRK10754        284 FSLIASGVIKVDVAEQQKFPLKDAQRAHEILESRATQGSSLLIP  327 (327)
T ss_pred             HHHHHCCCeeeecccCcEEcHHHHHHHHHHHHcCCCcceEEEeC
Confidence            899999999854   38999999999999999999889999863

>cd08244 MDR_enoyl_red Possible enoyl reductase

Probab=100.00  E-value=9.5e-37  Score=282.20  Aligned_cols=307  Identities=23%  Similarity=0.263  Sum_probs=253.2

Q ss_pred             cceeeeeecCCCCCccceeeccCCCCCCeEEEEEeeeccCcchHHhHhcCCCC---CCCCCcccccccEEEEEeCCCCCC
Q 018067           11 KNAFGWAAKDTSGVLSPFHFSRRATGEKDVTFKVTHCGICHSDLHMIKNEWGN---TIYPIVPGHEIVGVVTEVGSKVSK   87 (361)
Q Consensus        11 ~~~~~~~~~~~~~~l~~~~~~~p~~~~~evlV~v~~~~i~~~D~~~~~g~~~~---~~~p~~lG~e~~G~Vv~vG~~v~~   87 (361)
                      |+++.+...+.+..+++.+.+.|.+.++||+|++.++++|++|++...|..+.   ..+|.++|||++|+|+++|+++..
T Consensus         1 ~~a~~~~~~~~~~~~~~~~~~~~~~~~~~v~v~v~~~~i~~~d~~~~~g~~~~~~~~~~p~~~g~e~~G~v~~~G~~v~~   80 (324)
T cd08244           1 MRAIRLHEFGPPEVLVPEDVPDPVPGPGQVRIAVAAAGVHFVDTQLRSGWGPGPFPPELPYVPGGEVAGVVDAVGPGVDP   80 (324)
T ss_pred             CeEEEEcCCCCccceEEeccCCCCCCCCEEEEEEEEEeCCHHHHHHhCCCCCCCCCCCCCcCCccceEEEEEEeCCCCCC
Confidence            56777765555667777777778889999999999999999999988775432   355788999999999999999999


Q ss_pred             CCCCCEEEeccccCCCCCCcccccCCCCCCcchhcccccccCCCCcCCCcceeEEeecCCceEECCCCCCcccccccchh
Q 018067           88 FKVGDKVGVGCMVGSCRSCDSCAIDLENYCPKVIMTYANKYHDGTITYGGYSDIMVADEHFVVRIPEGTPLDATAPLLCA  167 (361)
Q Consensus        88 ~~~GdrV~~~~~~~~c~~c~~c~~~~~~~c~~~~~~~~~~~~~~~~~~g~~a~~v~v~~~~~~~ip~~~~~~~aa~l~~~  167 (361)
                      +++||+|+....                                 ...|+|++|+.++.++++++|+++++++++.+++.
T Consensus        81 ~~~Gd~V~~~~~---------------------------------~~~g~~~~~~~v~~~~~~~lp~~~~~~~a~~~~~~  127 (324)
T cd08244          81 AWLGRRVVAHTG---------------------------------RAGGGYAELAVADVDSLHPVPDGLDLEAAVAVVHD  127 (324)
T ss_pred             CCCCCEEEEccC---------------------------------CCCceeeEEEEEchHHeEeCCCCCCHHHHhhhcch
Confidence            999999974210                                 13789999999999999999999999999999999


Q ss_pred             hhhhhhHhhhcCCCCCCCEEEEEcC-ChHHHHHHHHHHHcCCeEEEEeCCchhHHHHHHHcCCCEEecCCCHHH---HHH
Q 018067          168 GITVYSPLRFYGLDKPGMHVGVVGL-GGLGHVAVKFAKAMGVKVTVISTSPSKKSEAIERLGADSFLVSRDQDE---MQA  243 (361)
Q Consensus       168 ~~ta~~~l~~~~~~~~g~~vlV~Ga-g~vG~~a~~la~~~g~~vi~~~~~~~~~~~~~~~~g~~~vv~~~~~~~---~~~  243 (361)
                      +.+|| ++....+++++++|+|+|+ |.+|++++++|+.+|++|+.++++++++..+ +++|++.+++.++.+.   +..
T Consensus       128 ~~ta~-~~~~~~~~~~~~~vlI~g~~~~~g~~~~~la~~~g~~v~~~~~~~~~~~~~-~~~g~~~~~~~~~~~~~~~~~~  205 (324)
T cd08244         128 GRTAL-GLLDLATLTPGDVVLVTAAAGGLGSLLVQLAKAAGATVVGAAGGPAKTALV-RALGADVAVDYTRPDWPDQVRE  205 (324)
T ss_pred             HHHHH-HHHHhcCCCCCCEEEEEcCCchHHHHHHHHHHHCCCEEEEEeCCHHHHHHH-HHcCCCEEEecCCccHHHHHHH
Confidence            99995 4555677899999999996 9999999999999999999999888877666 7899988888776443   333


Q ss_pred             hcC--CccEEEEcCCCcccHHHHHhccccCCEEEEecCCCCC-cccChHHHHhCCcEEEecccCC------HHHHHHHHH
Q 018067          244 AMG--TMDGIIDTVSAVHPLMPLIGLLKSQGKLVLVGAPEKP-LELPAFSLLMGRKIVGGSMIGG------MKETQEMID  314 (361)
Q Consensus       244 ~~~--g~d~vid~~g~~~~~~~~~~~l~~~G~~v~~g~~~~~-~~~~~~~~~~~~~~i~g~~~~~------~~~~~~~~~  314 (361)
                      ..+  ++|+++|++|+.. ...++++++++|+++.+|..+.. ..++....+.+++++.+.....      .+.++++++
T Consensus       206 ~~~~~~~d~vl~~~g~~~-~~~~~~~l~~~g~~v~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  284 (324)
T cd08244         206 ALGGGGVTVVLDGVGGAI-GRAALALLAPGGRFLTYGWASGEWTALDEDDARRRGVTVVGLLGVQAERGGLRALEARALA  284 (324)
T ss_pred             HcCCCCceEEEECCChHh-HHHHHHHhccCcEEEEEecCCCCCCccCHHHHhhCCcEEEEeecccCCHHHHHHHHHHHHH
Confidence            333  6999999999987 78999999999999999875432 2445455567888888765533      256778899


Q ss_pred             HHHcCCCceeE-EEEecccHHHHHHHHHcCCCceEEEEEe
Q 018067          315 FAAKHNIRADI-EVIPADYVNTALERLAKADVRYRFVIDV  353 (361)
Q Consensus       315 ll~~~~~~~~~-~~~~l~~~~~a~~~~~~~~~~gkvvi~~  353 (361)
                      ++.++++.+.+ +.++++++++|++.+.+++..||+++.+
T Consensus       285 ~l~~~~l~~~~~~~~~~~~~~~a~~~~~~~~~~~kvv~~~  324 (324)
T cd08244         285 EAAAGRLVPVVGQTFPLERAAEAHAALEARSTVGKVLLLP  324 (324)
T ss_pred             HHHCCCccCccceEEeHHHHHHHHHHHHcCCCCceEEEeC
Confidence            99999887655 8999999999999999998889999864

Member identified as possible enoyl reductase of the MDR family. 2-enoyl thioester reductase (ETR) catalyzes the NADPH-dependent dependent conversion of trans-2-enoyl acyl carrier protein/coenzyme A (ACP/CoA) to acyl-(ACP/CoA) in fatty acid synthesis. 2-enoyl thioester reductase activity has been linked in Candida tropicalis as essential in maintaining mitiochondrial respiratory function. This ETR family is a part of the medium chain dehydrogenase/reductase family, but lack the zinc coordination sites characteristic of the alcohol dehydrogenases in this family. NAD(P)(H)-dependent oxidoreductases are the major enzymes in the interconversion of alcohols and aldehydes, or ketones. Alcohol dehydrogenase in the liver converts ethanol and NAD+ to acetaldehyde and NADH, while in yeast and some other microorganisms ADH catalyzes the conversion acetaldehyde to ethanol in alcoholic fermentation. ADH is a member of the medium chain alcohol dehydr

>PTZ00354 alcohol dehydrogenase; Provisional

Probab=100.00  E-value=1.5e-36  Score=281.88  Aligned_cols=311  Identities=23%  Similarity=0.280  Sum_probs=258.0

Q ss_pred             ccceeeeeecCCCCCccceeeccCCCCCCeEEEEEeeeccCcchHHhHhcCCC-CCCCCCcccccccEEEEEeCCCCCCC
Q 018067           10 PKNAFGWAAKDTSGVLSPFHFSRRATGEKDVTFKVTHCGICHSDLHMIKNEWG-NTIYPIVPGHEIVGVVTEVGSKVSKF   88 (361)
Q Consensus        10 ~~~~~~~~~~~~~~~l~~~~~~~p~~~~~evlV~v~~~~i~~~D~~~~~g~~~-~~~~p~~lG~e~~G~Vv~vG~~v~~~   88 (361)
                      +|+++.+...+.+..+++++.+.|++.++|++|||.++++|+.|+....|..+ ....|.++|||++|+|+++|++++.+
T Consensus         1 ~m~a~~~~~~~~~~~~~~~~~~~~~~~~~~v~v~v~~~~i~~~d~~~~~~~~~~~~~~~~~~g~e~~G~v~~vG~~v~~~   80 (334)
T PTZ00354          1 MMRAVTLKGFGGVDVLKIGESPKPAPKRNDVLIKVSAAGVNRADTLQRQGKYPPPPGSSEILGLEVAGYVEDVGSDVKRF   80 (334)
T ss_pred             CcEEEEEEecCCCcceEEEeCCCCCCCCCEEEEEEEEEecCHHHHHHhCCCCCCCCCCCcccceeeEEEEEEeCCCCCCC
Confidence            58888887766666677777888889999999999999999999998877553 22446789999999999999999999


Q ss_pred             CCCCEEEeccccCCCCCCcccccCCCCCCcchhcccccccCCCCcCCCcceeEEeecCCceEECCCCCCcccccccchhh
Q 018067           89 KVGDKVGVGCMVGSCRSCDSCAIDLENYCPKVIMTYANKYHDGTITYGGYSDIMVADEHFVVRIPEGTPLDATAPLLCAG  168 (361)
Q Consensus        89 ~~GdrV~~~~~~~~c~~c~~c~~~~~~~c~~~~~~~~~~~~~~~~~~g~~a~~v~v~~~~~~~ip~~~~~~~aa~l~~~~  168 (361)
                      ++||+|+..                                   ..+|+|++|++++.++++++|+++++.+++.+++.+
T Consensus        81 ~~Gd~V~~~-----------------------------------~~~g~~~~~~~v~~~~~~~ip~~~~~~~a~~~~~~~  125 (334)
T PTZ00354         81 KEGDRVMAL-----------------------------------LPGGGYAEYAVAHKGHVMHIPQGYTFEEAAAIPEAF  125 (334)
T ss_pred             CCCCEEEEe-----------------------------------cCCCceeeEEEecHHHcEeCCCCCCHHHHHHHHHHH
Confidence            999999731                                   235899999999999999999999999999999999


Q ss_pred             hhhhhHhhhcCCCCCCCEEEEEcC-ChHHHHHHHHHHHcCCeEEEEeCCchhHHHHHHHcCCCEEecCCCHH-H---HHH
Q 018067          169 ITVYSPLRFYGLDKPGMHVGVVGL-GGLGHVAVKFAKAMGVKVTVISTSPSKKSEAIERLGADSFLVSRDQD-E---MQA  243 (361)
Q Consensus       169 ~ta~~~l~~~~~~~~g~~vlV~Ga-g~vG~~a~~la~~~g~~vi~~~~~~~~~~~~~~~~g~~~vv~~~~~~-~---~~~  243 (361)
                      .+||+++.....+++|++|+|+|+ |.+|++++++|+.+|+++++++++++++..+ +++|++.+++....+ .   +..
T Consensus       126 ~ta~~~l~~~~~~~~~~~vlI~ga~g~~g~~~~~~a~~~g~~v~~~~~~~~~~~~~-~~~g~~~~~~~~~~~~~~~~~~~  204 (334)
T PTZ00354        126 LTAWQLLKKHGDVKKGQSVLIHAGASGVGTAAAQLAEKYGAATIITTSSEEKVDFC-KKLAAIILIRYPDEEGFAPKVKK  204 (334)
T ss_pred             HHHHHHHHHhcCCCCCCEEEEEcCCchHHHHHHHHHHHcCCEEEEEeCCHHHHHHH-HHcCCcEEEecCChhHHHHHHHH
Confidence            999999988788899999999996 9999999999999999988888888777666 779998888876543 2   333


Q ss_pred             hc--CCccEEEEcCCCcccHHHHHhccccCCEEEEecCCCC-Ccc-cChHHHHhCCcEEEecccCCH----------HHH
Q 018067          244 AM--GTMDGIIDTVSAVHPLMPLIGLLKSQGKLVLVGAPEK-PLE-LPAFSLLMGRKIVGGSMIGGM----------KET  309 (361)
Q Consensus       244 ~~--~g~d~vid~~g~~~~~~~~~~~l~~~G~~v~~g~~~~-~~~-~~~~~~~~~~~~i~g~~~~~~----------~~~  309 (361)
                      ..  .++|++||++|+.. +..++++++++|+++.+|...+ ... ++...++.++.++.++.....          +.+
T Consensus       205 ~~~~~~~d~~i~~~~~~~-~~~~~~~l~~~g~~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  283 (334)
T PTZ00354        205 LTGEKGVNLVLDCVGGSY-LSETAEVLAVDGKWIVYGFMGGAKVEKFNLLPLLRKRASIIFSTLRSRSDEYKADLVASFE  283 (334)
T ss_pred             HhCCCCceEEEECCchHH-HHHHHHHhccCCeEEEEecCCCCcccccCHHHHHhhCCEEEeeeccccchhhhHHHHHHHH
Confidence            33  37999999998765 8899999999999999986432 222 666666678778888654331          224


Q ss_pred             HHHHHHHHcCCCceeE-EEEecccHHHHHHHHHcCCCceEEEEEeCCcc
Q 018067          310 QEMIDFAAKHNIRADI-EVIPADYVNTALERLAKADVRYRFVIDVANTM  357 (361)
Q Consensus       310 ~~~~~ll~~~~~~~~~-~~~~l~~~~~a~~~~~~~~~~gkvvi~~~~~~  357 (361)
                      +++++++.++.+++.+ +.+++++++++++.+.+++..+|+++.+.++.
T Consensus       284 ~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~kvvv~~~~~~  332 (334)
T PTZ00354        284 REVLPYMEEGEIKPIVDRTYPLEEVAEAHTFLEQNKNIGKVVLTVNEPL  332 (334)
T ss_pred             HHHHHHHHCCCccCccccEEcHHHHHHHHHHHHhCCCCceEEEecCCCC
Confidence            6788899999988655 89999999999999998887899999887764

>cd08270 MDR4 Medium chain dehydrogenases/reductase (MDR)/zinc-dependent alcohol dehydrogenase-like family

Probab=100.00  E-value=1.3e-36  Score=278.93  Aligned_cols=296  Identities=21%  Similarity=0.283  Sum_probs=246.3

Q ss_pred             cceeeeeecCCCCCccceeeccCCCCCCeEEEEEeeeccCcchHHhHhcCCCCCCCCCcccccccEEEEEeCCCCCCCCC
Q 018067           11 KNAFGWAAKDTSGVLSPFHFSRRATGEKDVTFKVTHCGICHSDLHMIKNEWGNTIYPIVPGHEIVGVVTEVGSKVSKFKV   90 (361)
Q Consensus        11 ~~~~~~~~~~~~~~l~~~~~~~p~~~~~evlV~v~~~~i~~~D~~~~~g~~~~~~~p~~lG~e~~G~Vv~vG~~v~~~~~   90 (361)
                      |+++.+...+ |..+++++.+.|.+.++||+||++++++|+.|++...+.    ..|.++|||++|+|+++|+++..|++
T Consensus         1 ~~~~~~~~~~-~~~~~~~~~~~p~~~~~ev~v~v~~~~i~~~d~~~~~~~----~~~~~~g~e~~G~v~~~G~~v~~~~~   75 (305)
T cd08270           1 MRALVVDPDA-PLRLRLGEVPDPQPAPHEALVRVAAISLNRGELKFAAER----PDGAVPGWDAAGVVERAAADGSGPAV   75 (305)
T ss_pred             CeEEEEccCC-CceeEEEecCCCCCCCCEEEEEEEEEecCHHHHHhhccC----CCCCcccceeEEEEEEeCCCCCCCCC
Confidence            4566665533 778888899999999999999999999999999876521    23568999999999999999999999


Q ss_pred             CCEEEeccccCCCCCCcccccCCCCCCcchhcccccccCCCCcCCCcceeEEeecCCceEECCCCCCcccccccchhhhh
Q 018067           91 GDKVGVGCMVGSCRSCDSCAIDLENYCPKVIMTYANKYHDGTITYGGYSDIMVADEHFVVRIPEGTPLDATAPLLCAGIT  170 (361)
Q Consensus        91 GdrV~~~~~~~~c~~c~~c~~~~~~~c~~~~~~~~~~~~~~~~~~g~~a~~v~v~~~~~~~ip~~~~~~~aa~l~~~~~t  170 (361)
                      ||+|+.                                   ....|+|++|+.++.+.++++|+++++++++.+++.+.+
T Consensus        76 Gd~V~~-----------------------------------~~~~g~~~~~~~v~~~~~~~ip~~~~~~~a~~~~~~~~t  120 (305)
T cd08270          76 GARVVG-----------------------------------LGAMGAWAELVAVPTGWLAVLPDGVSFAQAATLPVAGVT  120 (305)
T ss_pred             CCEEEE-----------------------------------ecCCcceeeEEEEchHHeEECCCCCCHHHHHHhHhHHHH
Confidence            999973                                   123789999999999999999999999999999999999


Q ss_pred             hhhHhhhcCCCCCCCEEEEEcC-ChHHHHHHHHHHHcCCeEEEEeCCchhHHHHHHHcCCCEEecCCCHHHHHHhcCCcc
Q 018067          171 VYSPLRFYGLDKPGMHVGVVGL-GGLGHVAVKFAKAMGVKVTVISTSPSKKSEAIERLGADSFLVSRDQDEMQAAMGTMD  249 (361)
Q Consensus       171 a~~~l~~~~~~~~g~~vlV~Ga-g~vG~~a~~la~~~g~~vi~~~~~~~~~~~~~~~~g~~~vv~~~~~~~~~~~~~g~d  249 (361)
                      ||+++...... +|++|+|+|+ |.+|++++++|+.+|++|+.+++++++...+ +++|++..++... +   ...+++|
T Consensus       121 a~~~~~~~~~~-~~~~vli~g~~~~~g~~~~~~a~~~g~~v~~~~~~~~~~~~~-~~~g~~~~~~~~~-~---~~~~~~d  194 (305)
T cd08270         121 ALRALRRGGPL-LGRRVLVTGASGGVGRFAVQLAALAGAHVVAVVGSPARAEGL-RELGAAEVVVGGS-E---LSGAPVD  194 (305)
T ss_pred             HHHHHHHhCCC-CCCEEEEECCCcHHHHHHHHHHHHcCCEEEEEeCCHHHHHHH-HHcCCcEEEeccc-c---ccCCCce
Confidence            99999887764 5999999998 9999999999999999999998887776665 6799876554322 1   1124799


Q ss_pred             EEEEcCCCcccHHHHHhccccCCEEEEecCCCCC-cccChHHHHh--CCcEEEecccCC----HHHHHHHHHHHHcCCCc
Q 018067          250 GIIDTVSAVHPLMPLIGLLKSQGKLVLVGAPEKP-LELPAFSLLM--GRKIVGGSMIGG----MKETQEMIDFAAKHNIR  322 (361)
Q Consensus       250 ~vid~~g~~~~~~~~~~~l~~~G~~v~~g~~~~~-~~~~~~~~~~--~~~~i~g~~~~~----~~~~~~~~~ll~~~~~~  322 (361)
                      +++|++|+.. +..++++++++|+++.+|..... ..++...+..  ++.++.++....    .+.++.+++++.+++++
T Consensus       195 ~vl~~~g~~~-~~~~~~~l~~~G~~v~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~  273 (305)
T cd08270         195 LVVDSVGGPQ-LARALELLAPGGTVVSVGSSSGEPAVFNPAAFVGGGGGRRLYTFFLYDGEPLAADLARLLGLVAAGRLD  273 (305)
T ss_pred             EEEECCCcHH-HHHHHHHhcCCCEEEEEeccCCCcccccHHHHhcccccceEEEEEccCHHHHHHHHHHHHHHHHCCCcc
Confidence            9999999875 89999999999999999875432 3445555544  688888876653    45688899999999998


Q ss_pred             eeE-EEEecccHHHHHHHHHcCCCceEEEEEe
Q 018067          323 ADI-EVIPADYVNTALERLAKADVRYRFVIDV  353 (361)
Q Consensus       323 ~~~-~~~~l~~~~~a~~~~~~~~~~gkvvi~~  353 (361)
                      +.+ ++++++++++|++.+.+++..||+++.+
T Consensus       274 ~~~~~~~~~~~~~~a~~~~~~~~~~gkvvi~~  305 (305)
T cd08270         274 PRIGWRGSWTEIDEAAEALLARRFRGKAVLDV  305 (305)
T ss_pred             ceeccEEcHHHHHHHHHHHHcCCCCceEEEeC
Confidence            766 8999999999999999998889999864

This group is a member of the medium chain dehydrogenases/reductase (MDR)/zinc-dependent alcohol dehydrogenase-like family, but lacks the zinc-binding sites of the zinc-dependent alcohol dehydrogenases. The medium chain dehydrogenases/reductase (MDR)/zinc-dependent alcohol dehydrogenase-like family, which contains the zinc-dependent alcohol dehydrogenase (ADH-Zn) and related proteins, is a diverse group of proteins related to the first identified member, class I mammalian ADH. MDRs display a broad range of activities and are distinguished from the smaller short chain dehydrogenases (~ 250 amino acids vs. the ~ 350 amino acids of the MDR). The MDR proteins have 2 domains: a C-terminal NAD(P)-binding Rossmann fold domain of a beta-alpha form and an N-terminal catalytic domain with distant homology to GroES. The MDR group contains a host of activities, including the founding alcoh

>cd05280 MDR_yhdh_yhfp Yhdh and yhfp-like putative quinone oxidoreductases

Probab=100.00  E-value=2.4e-36  Score=279.58  Aligned_cols=310  Identities=22%  Similarity=0.248  Sum_probs=246.8

Q ss_pred             cceeeeeecCCCCCccceeeccCCCCCCeEEEEEeeeccCcchHHhHhcCCCC-CCCCCcccccccEEEEEeCCCCCCCC
Q 018067           11 KNAFGWAAKDTSGVLSPFHFSRRATGEKDVTFKVTHCGICHSDLHMIKNEWGN-TIYPIVPGHEIVGVVTEVGSKVSKFK   89 (361)
Q Consensus        11 ~~~~~~~~~~~~~~l~~~~~~~p~~~~~evlV~v~~~~i~~~D~~~~~g~~~~-~~~p~~lG~e~~G~Vv~vG~~v~~~~   89 (361)
                      |+++++..+++++.+++.++|.|.+++++|+|+++++++|++|+..+.|..+. ..+|.++|||++|+|+++  +++.|+
T Consensus         1 ~~a~~~~~~~~~~~~~~~~~~~p~~~~~~v~v~v~~~~i~~~d~~~~~g~~~~~~~~~~~~g~e~~G~v~~~--~~~~~~   78 (325)
T cd05280           1 FKALVVEEQDGGVSLFLRTLPLDDLPEGDVLIRVHYSSLNYKDALAATGNGGVTRNYPHTPGIDAAGTVVSS--DDPRFR   78 (325)
T ss_pred             CceEEEcccCCCCcceEEeCCCCCCCCCeEEEEEEEeecChHHHHHhcCCCCCCCCCCCccCcccEEEEEEe--CCCCCC
Confidence            67788877666668999999999999999999999999999999998886542 245778999999999998  456799


Q ss_pred             CCCEEEeccccCCCCCCcccccCCCCCCcchhcccccccCCCCcCCCcceeEEeecCCceEECCCCCCcccccccchhhh
Q 018067           90 VGDKVGVGCMVGSCRSCDSCAIDLENYCPKVIMTYANKYHDGTITYGGYSDIMVADEHFVVRIPEGTPLDATAPLLCAGI  169 (361)
Q Consensus        90 ~GdrV~~~~~~~~c~~c~~c~~~~~~~c~~~~~~~~~~~~~~~~~~g~~a~~v~v~~~~~~~ip~~~~~~~aa~l~~~~~  169 (361)
                      +||||+...+                             ..|....|+|++|+.++.++++++|+++++++++.+++.+.
T Consensus        79 ~Gd~V~~~~~-----------------------------~~g~~~~g~~~~~~~v~~~~~~~lp~~~~~~~aa~~~~~~~  129 (325)
T cd05280          79 EGDEVLVTGY-----------------------------DLGMNTDGGFAEYVRVPADWVVPLPEGLSLREAMILGTAGF  129 (325)
T ss_pred             CCCEEEEccc-----------------------------ccCCCCCceeEEEEEEchhhEEECCCCCCHHHHHhhHHHHH
Confidence            9999975320                             01233578999999999999999999999999999999999


Q ss_pred             hhhhHhhhcCCC--C-CCCEEEEEcC-ChHHHHHHHHHHHcCCeEEEEeCCchhHHHHHHHcCCCEEecCCCHH--HHHH
Q 018067          170 TVYSPLRFYGLD--K-PGMHVGVVGL-GGLGHVAVKFAKAMGVKVTVISTSPSKKSEAIERLGADSFLVSRDQD--EMQA  243 (361)
Q Consensus       170 ta~~~l~~~~~~--~-~g~~vlV~Ga-g~vG~~a~~la~~~g~~vi~~~~~~~~~~~~~~~~g~~~vv~~~~~~--~~~~  243 (361)
                      +||.+++...+.  . .+++|+|+|+ |.+|++++++|+.+|++|++++++++++..+ +++|++.+++.++.+  ..+.
T Consensus       130 ta~~~l~~~~~~~~~~~~~~vlI~g~~g~vg~~~~~~a~~~g~~v~~~~~~~~~~~~~-~~~g~~~~~~~~~~~~~~~~~  208 (325)
T cd05280         130 TAALSVHRLEDNGQTPEDGPVLVTGATGGVGSIAVAILAKLGYTVVALTGKEEQADYL-KSLGASEVLDREDLLDESKKP  208 (325)
T ss_pred             HHHHHHHHHhhccCCCCCCEEEEECCccHHHHHHHHHHHHcCCEEEEEeCCHHHHHHH-HhcCCcEEEcchhHHHHHHHH
Confidence            999998765433  4 4579999998 9999999999999999999999988887666 789999888776532  2222


Q ss_pred             hc-CCccEEEEcCCCcccHHHHHhccccCCEEEEecCCCC-CcccChHHHHhCCcEEEecccCCH------HHHHHHHHH
Q 018067          244 AM-GTMDGIIDTVSAVHPLMPLIGLLKSQGKLVLVGAPEK-PLELPAFSLLMGRKIVGGSMIGGM------KETQEMIDF  315 (361)
Q Consensus       244 ~~-~g~d~vid~~g~~~~~~~~~~~l~~~G~~v~~g~~~~-~~~~~~~~~~~~~~~i~g~~~~~~------~~~~~~~~l  315 (361)
                      .. +++|++||++|+.. +..++++++++|+++.+|.... ...++...++.+++++.+......      +.++.+.++
T Consensus       209 ~~~~~~d~vi~~~~~~~-~~~~~~~l~~~g~~v~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  287 (325)
T cd05280         209 LLKARWAGAIDTVGGDV-LANLLKQTKYGGVVASCGNAAGPELTTTVLPFILRGVSLLGIDSVNCPMELRKQVWQKLATE  287 (325)
T ss_pred             hcCCCccEEEECCchHH-HHHHHHhhcCCCEEEEEecCCCCccccccchheeeeeEEEEEEeecCchhHHHHHHHHHHHH
Confidence            22 37999999999865 9999999999999999997542 224455555568888888654321      223444555


Q ss_pred             HHcCCCceeEEEEecccHHHHHHHHHcCCCceEEEEEe
Q 018067          316 AAKHNIRADIEVIPADYVNTALERLAKADVRYRFVIDV  353 (361)
Q Consensus       316 l~~~~~~~~~~~~~l~~~~~a~~~~~~~~~~gkvvi~~  353 (361)
                      +..+...+..+++++++++++++.+.+++..||+++++
T Consensus       288 ~~~~~~~~~~~~~~~~~~~~a~~~~~~~~~~gk~vv~~  325 (325)
T cd05280         288 WKPDLLEIVVREISLEELPEAIDRLLAGKHRGRTVVKI  325 (325)
T ss_pred             HhcCCccceeeEecHHHHHHHHHHHhcCCcceEEEEeC
Confidence            55664444448999999999999999999889999864

Yhdh and yhfp-like putative quinone oxidoreductases (QOR). QOR catalyzes the conversion of a quinone + NAD(P)H to a hydroquinone + NAD(P)+. Quinones are cyclic diones derived from aromatic compounds. Membrane bound QOR actin the respiratory chains of bacteria and mitochondria, while soluble QOR acts to protect from toxic quinones (e.g. DT-diaphorase) or as a soluble eye-lens protein in some vertebrates (e.g. zeta-crystalin). QOR reduces quinones through a semi-quinone intermediate via a NAD(P)H-dependent single electron transfer. QOR is a member of the medium chain dehydrogenase/reductase family, but lacks the zinc-binding sites of the prototypical alcohol dehydrogenases of this group. NAD(P)(H)-dependent oxidoreductases are the major enzymes in the interconversion of alcohols and aldehydes, or ketones. Alcohol dehydrogenase in the liver converts ethanol and NAD+ to acetaldehyde and NADH, while in yeast and so

>TIGR02823 oxido_YhdH putative quinone oxidoreductase, YhdH/YhfP family

Probab=100.00  E-value=7.8e-36  Score=276.15  Aligned_cols=308  Identities=24%  Similarity=0.278  Sum_probs=247.5

Q ss_pred             eeeeeecCCCCCccceeeccCCCCCCeEEEEEeeeccCcchHHhHhcCCCC-CCCCCcccccccEEEEEeCCCCCCCCCC
Q 018067           13 AFGWAAKDTSGVLSPFHFSRRATGEKDVTFKVTHCGICHSDLHMIKNEWGN-TIYPIVPGHEIVGVVTEVGSKVSKFKVG   91 (361)
Q Consensus        13 ~~~~~~~~~~~~l~~~~~~~p~~~~~evlV~v~~~~i~~~D~~~~~g~~~~-~~~p~~lG~e~~G~Vv~vG~~v~~~~~G   91 (361)
                      ++.+...++|..++++++|.|.+.+++|+||++++++|++|++.+.|.++. ..+|..+|||++|+|++  +++..|++|
T Consensus         2 a~~~~~~~~~~~~~~~~~~~p~~~~~~v~v~v~~~~i~~~d~~~~~g~~~~~~~~~~~~g~e~~G~V~~--~~~~~~~~G   79 (323)
T TIGR02823         2 ALVVEKEDGKVSAQVETLDLSDLPEGDVLIKVAYSSLNYKDALAITGKGGVVRSYPMIPGIDAAGTVVS--SEDPRFREG   79 (323)
T ss_pred             eEEEccCCCCcceeEeecCCCCCCCCeEEEEEEEEEcCHHHHHHHcCCCCCCCCCCccceeeeEEEEEe--cCCCCCCCC
Confidence            455555566778899999999999999999999999999999988886532 25578899999999998  566789999


Q ss_pred             CEEEeccccCCCCCCcccccCCCCCCcchhcccccccCCCCcCCCcceeEEeecCCceEECCCCCCcccccccchhhhhh
Q 018067           92 DKVGVGCMVGSCRSCDSCAIDLENYCPKVIMTYANKYHDGTITYGGYSDIMVADEHFVVRIPEGTPLDATAPLLCAGITV  171 (361)
Q Consensus        92 drV~~~~~~~~c~~c~~c~~~~~~~c~~~~~~~~~~~~~~~~~~g~~a~~v~v~~~~~~~ip~~~~~~~aa~l~~~~~ta  171 (361)
                      |||+...+                             ..+....|+|++|+.++.+.++++|+++++++++.+++.+.+|
T Consensus        80 d~V~~~~~-----------------------------~~~~~~~g~~~~~~~~~~~~~~~iP~~~~~~~aa~~~~~~~ta  130 (323)
T TIGR02823        80 DEVIVTGY-----------------------------GLGVSHDGGYSQYARVPADWLVPLPEGLSLREAMALGTAGFTA  130 (323)
T ss_pred             CEEEEccC-----------------------------CCCCCCCccceEEEEEchhheEECCCCCCHHHhhhhhhhHHHH
Confidence            99975321                             0022347899999999999999999999999999999999999


Q ss_pred             hhHhhhcCC--CCCCC-EEEEEcC-ChHHHHHHHHHHHcCCeEEEEeCCchhHHHHHHHcCCCEEecCCCHHH-HHHhc-
Q 018067          172 YSPLRFYGL--DKPGM-HVGVVGL-GGLGHVAVKFAKAMGVKVTVISTSPSKKSEAIERLGADSFLVSRDQDE-MQAAM-  245 (361)
Q Consensus       172 ~~~l~~~~~--~~~g~-~vlV~Ga-g~vG~~a~~la~~~g~~vi~~~~~~~~~~~~~~~~g~~~vv~~~~~~~-~~~~~-  245 (361)
                      |.+++...+  +.+|+ +|+|+|+ |.+|++++++|+.+|+++++++++++++..+ +++|++.+++.++.+. +..+. 
T Consensus       131 ~~~~~~~~~~~~~~~~~~vlI~g~~g~vg~~~~~la~~~G~~vi~~~~~~~~~~~~-~~~g~~~~~~~~~~~~~~~~~~~  209 (323)
T TIGR02823       131 ALSVMALERNGLTPEDGPVLVTGATGGVGSLAVAILSKLGYEVVASTGKAEEEDYL-KELGASEVIDREDLSPPGKPLEK  209 (323)
T ss_pred             HHHHHHhhhcCCCCCCceEEEEcCCcHHHHHHHHHHHHcCCeEEEEeCCHHHHHHH-HhcCCcEEEccccHHHHHHHhcC
Confidence            887754432  68898 9999997 9999999999999999999988888877555 8899988888765432 33333 


Q ss_pred             CCccEEEEcCCCcccHHHHHhccccCCEEEEecCCCC-CcccChHHHHhCCcEEEecccCC--H----HHHHHHHHHHHc
Q 018067          246 GTMDGIIDTVSAVHPLMPLIGLLKSQGKLVLVGAPEK-PLELPAFSLLMGRKIVGGSMIGG--M----KETQEMIDFAAK  318 (361)
Q Consensus       246 ~g~d~vid~~g~~~~~~~~~~~l~~~G~~v~~g~~~~-~~~~~~~~~~~~~~~i~g~~~~~--~----~~~~~~~~ll~~  318 (361)
                      +++|.++|++|+.. +..++++++++|+++.+|.... ....+...++.+++++.+.....  .    +.++.+.+++..
T Consensus       210 ~~~d~vld~~g~~~-~~~~~~~l~~~G~~v~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  288 (323)
T TIGR02823       210 ERWAGAVDTVGGHT-LANVLAQLKYGGAVAACGLAGGPDLPTTVLPFILRGVSLLGIDSVYCPMALREAAWQRLATDLKP  288 (323)
T ss_pred             CCceEEEECccHHH-HHHHHHHhCCCCEEEEEcccCCCCccccHHHHhhcceEEEEEeccccCchhHHHHHHHHHHHhhc
Confidence            36999999999876 8999999999999999997543 23344455567889988864321  1    235566667778


Q ss_pred             CCCceeEEEEecccHHHHHHHHHcCCCceEEEEEe
Q 018067          319 HNIRADIEVIPADYVNTALERLAKADVRYRFVIDV  353 (361)
Q Consensus       319 ~~~~~~~~~~~l~~~~~a~~~~~~~~~~gkvvi~~  353 (361)
                      +.+++..+.++++++++||+.+.+++..+|+++.+
T Consensus       289 ~~~~~~~~~~~l~~~~~a~~~~~~~~~~~k~vv~~  323 (323)
T TIGR02823       289 RNLESITREITLEELPEALEQILAGQHRGRTVVDV  323 (323)
T ss_pred             CCCcCceeeecHHHHHHHHHHHhCCCccceEEEeC
Confidence            88776568999999999999999999889999863

This model represents a subfamily of pfam00107 as defined by Pfam, a superfamily in which some members are zinc-binding medium-chain alcohol dehydrogenases while others are quinone oxidoreductases with no bound zinc. This subfamily includes proteins studied crystallographically for insight into function: YhdH from Escherichia coli and YhfP from Bacillus subtilis. Members bind NADPH or NAD, but not zinc.

>KOG1198 consensus Zinc-binding oxidoreductase [Energy production and conversion; General function prediction only]

Probab=100.00  E-value=1.9e-36  Score=278.18  Aligned_cols=297  Identities=25%  Similarity=0.334  Sum_probs=231.2

Q ss_pred             CCCCccceeeccCCCCCCeEEEEEeeeccCcchHHhHhcCCCCC----CCCCcccccccEEEE---EeC-CCCCCCCCCC
Q 018067           21 TSGVLSPFHFSRRATGEKDVTFKVTHCGICHSDLHMIKNEWGNT----IYPIVPGHEIVGVVT---EVG-SKVSKFKVGD   92 (361)
Q Consensus        21 ~~~~l~~~~~~~p~~~~~evlV~v~~~~i~~~D~~~~~g~~~~~----~~p~~lG~e~~G~Vv---~vG-~~v~~~~~Gd   92 (361)
                      ++.....++.+.|.|++++++|++.++++|+.|+.++.|.....    .+|.+.+.++.|++.   ..| ..+..+..||
T Consensus        16 ~~~~~~~~~~~iP~~~~~~~~i~~~a~a~NpiD~~~~~g~~~~~~~~~~~p~ii~~~g~~~~~~~~~~g~~~~~~~~~g~   95 (347)
T KOG1198|consen   16 GGEVLFSEEVPIPEPEDGEVLIKVVAVALNPIDLKIRNGYYSPIPLGREFPGIIGRDGSGVVGAVESVGDDVVGGWVHGD   95 (347)
T ss_pred             CcceEEeecccCCCCCCCceEEEEEEeccChHHHHHHccCcCCCCCccCCCCccccccCCceeEEeccccccccceEeee
Confidence            34445567899999999999999999999999999999876543    356555555555533   333 2223455666


Q ss_pred             EEEeccccCCCCCCcccccCCCCCCcchhcccccccCCCCcCCCcceeEEeecCCceEECCCCCCcccccccchhhhhhh
Q 018067           93 KVGVGCMVGSCRSCDSCAIDLENYCPKVIMTYANKYHDGTITYGGYSDIMVADEHFVVRIPEGTPLDATAPLLCAGITVY  172 (361)
Q Consensus        93 rV~~~~~~~~c~~c~~c~~~~~~~c~~~~~~~~~~~~~~~~~~g~~a~~v~v~~~~~~~ip~~~~~~~aa~l~~~~~ta~  172 (361)
                      ++.                                   .....|+|+||+++|...++++|+++++.+||+++.++.|||
T Consensus        96 ~~~-----------------------------------~~~~~g~~aey~v~p~~~~~~~P~~l~~~~aa~~p~~~~tA~  140 (347)
T KOG1198|consen   96 AVV-----------------------------------AFLSSGGLAEYVVVPEKLLVKIPESLSFEEAAALPLAALTAL  140 (347)
T ss_pred             EEe-----------------------------------eccCCCceeeEEEcchhhccCCCCccChhhhhcCchHHHHHH
Confidence            654                                   346789999999999999999999999999999999999999


Q ss_pred             hHhhhcC------CCCCCCEEEEEcC-ChHHHHHHHHHHHcCCeEEEEeCCchhHHHHHHHcCCCEEecCCCHHHHHHhc
Q 018067          173 SPLRFYG------LDKPGMHVGVVGL-GGLGHVAVKFAKAMGVKVTVISTSPSKKSEAIERLGADSFLVSRDQDEMQAAM  245 (361)
Q Consensus       173 ~~l~~~~------~~~~g~~vlV~Ga-g~vG~~a~~la~~~g~~vi~~~~~~~~~~~~~~~~g~~~vv~~~~~~~~~~~~  245 (361)
                      .++....      +.++|++|||+|+ |++|++++|+|++.|+..++++.+.++ .++++++|++.++|+++++.++...
T Consensus       141 ~al~~~~~~~~~~~~~~g~~vLv~ggsggVG~~aiQlAk~~~~~~v~t~~s~e~-~~l~k~lGAd~vvdy~~~~~~e~~k  219 (347)
T KOG1198|consen  141 SALFQLAPGKRSKKLSKGKSVLVLGGSGGVGTAAIQLAKHAGAIKVVTACSKEK-LELVKKLGADEVVDYKDENVVELIK  219 (347)
T ss_pred             HHHHhccccccccccCCCCeEEEEeCCcHHHHHHHHHHHhcCCcEEEEEcccch-HHHHHHcCCcEeecCCCHHHHHHHH
Confidence            9999999      8899999999986 999999999999999655555555554 5666999999999999988776654


Q ss_pred             C----CccEEEEcCCCcccHHHHHhccccCCEEEEecCCCC---CcccC-----hHH-----H-HhCCcEEEecccCCHH
Q 018067          246 G----TMDGIIDTVSAVHPLMPLIGLLKSQGKLVLVGAPEK---PLELP-----AFS-----L-LMGRKIVGGSMIGGMK  307 (361)
Q Consensus       246 ~----g~d~vid~~g~~~~~~~~~~~l~~~G~~v~~g~~~~---~~~~~-----~~~-----~-~~~~~~i~g~~~~~~~  307 (361)
                      .    ++|+||||+|+.. ......++..+|+...++...+   .....     ...     . ..+.--.........+
T Consensus       220 k~~~~~~DvVlD~vg~~~-~~~~~~~l~~~g~~~~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  298 (347)
T KOG1198|consen  220 KYTGKGVDVVLDCVGGST-LTKSLSCLLKGGGGAYIGLVGDELANYKLDDLWQSANGIKLYSLGLKGVNYRWLYFVPSAE  298 (347)
T ss_pred             hhcCCCccEEEECCCCCc-cccchhhhccCCceEEEEeccccccccccccchhhhhhhhheeeeeeccceeeeeecCCHH
Confidence            3    7999999999975 7888888888887555554332   11111     000     0 0111112333445567


Q ss_pred             HHHHHHHHHHcCCCceeE-EEEecccHHHHHHHHHcCCCceEEEEEeC
Q 018067          308 ETQEMIDFAAKHNIRADI-EVIPADYVNTALERLAKADVRYRFVIDVA  354 (361)
Q Consensus       308 ~~~~~~~ll~~~~~~~~~-~~~~l~~~~~a~~~~~~~~~~gkvvi~~~  354 (361)
                      .++.+.++++++++++.+ +.||++++.+||+++.+++.+||+++.+.
T Consensus       299 ~l~~l~~~ie~gkikp~i~~~~p~~~~~ea~~~~~~~~~~GK~vl~~~  346 (347)
T KOG1198|consen  299 YLKALVELIEKGKIKPVIDSVYPFSQAKEAFEKLEKSHATGKVVLEKD  346 (347)
T ss_pred             HHHHHHHHHHcCcccCCcceeeeHHHHHHHHHHHhhcCCcceEEEEec
Confidence            899999999999999998 89999999999999999998999999875

>cd08250 Mgc45594_like Mgc45594 gene product and other MDR family members

Probab=100.00  E-value=6e-36  Score=277.62  Aligned_cols=301  Identities=23%  Similarity=0.311  Sum_probs=250.8

Q ss_pred             cceeeeeecCC--CCCccceeeccCCCCCCeEEEEEeeeccCcchHHhHhcCCCC-CCCCCcccccccEEEEEeCCCCCC
Q 018067           11 KNAFGWAAKDT--SGVLSPFHFSRRATGEKDVTFKVTHCGICHSDLHMIKNEWGN-TIYPIVPGHEIVGVVTEVGSKVSK   87 (361)
Q Consensus        11 ~~~~~~~~~~~--~~~l~~~~~~~p~~~~~evlV~v~~~~i~~~D~~~~~g~~~~-~~~p~~lG~e~~G~Vv~vG~~v~~   87 (361)
                      |+++.+..+++  ++.+++++++.|.++++|++||+.++++|+.|++...|.+.. ..+|+++|||++|+|+++|++++.
T Consensus         2 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ev~i~v~~~gi~~~d~~~~~g~~~~~~~~p~~~g~e~~G~v~~vG~~v~~   81 (329)
T cd08250           2 FRKLVVHRLSPNFREATSIVDVPVPLPGPGEVLVKNRFVGINASDINFTAGRYDPGVKPPFDCGFEGVGEVVAVGEGVTD   81 (329)
T ss_pred             ceEEEeccCCCCcccCceEEecCCCCCCCCEEEEEEEEEecCHHHHHHHhCCCCCCCCCCcccCceeEEEEEEECCCCCC
Confidence            78888877766  778899999999999999999999999999999988876542 367889999999999999999999


Q ss_pred             CCCCCEEEeccccCCCCCCcccccCCCCCCcchhcccccccCCCCcCCCcceeEEeecCCceEECCCCCCcccccccchh
Q 018067           88 FKVGDKVGVGCMVGSCRSCDSCAIDLENYCPKVIMTYANKYHDGTITYGGYSDIMVADEHFVVRIPEGTPLDATAPLLCA  167 (361)
Q Consensus        88 ~~~GdrV~~~~~~~~c~~c~~c~~~~~~~c~~~~~~~~~~~~~~~~~~g~~a~~v~v~~~~~~~ip~~~~~~~aa~l~~~  167 (361)
                      |++||+|+.                                    ...|+|++|+.++.+.++++|+.  +.+++.+++.
T Consensus        82 ~~~Gd~V~~------------------------------------~~~g~~~s~~~v~~~~~~~ip~~--~~~~a~l~~~  123 (329)
T cd08250          82 FKVGDAVAT------------------------------------MSFGAFAEYQVVPARHAVPVPEL--KPEVLPLLVS  123 (329)
T ss_pred             CCCCCEEEE------------------------------------ecCcceeEEEEechHHeEECCCC--cchhhhcccH
Confidence            999999974                                    23688999999999999999997  4567889999


Q ss_pred             hhhhhhHhhhcCCCCCCCEEEEEcC-ChHHHHHHHHHHHcCCeEEEEeCCchhHHHHHHHcCCCEEecCCCHHH---HHH
Q 018067          168 GITVYSPLRFYGLDKPGMHVGVVGL-GGLGHVAVKFAKAMGVKVTVISTSPSKKSEAIERLGADSFLVSRDQDE---MQA  243 (361)
Q Consensus       168 ~~ta~~~l~~~~~~~~g~~vlV~Ga-g~vG~~a~~la~~~g~~vi~~~~~~~~~~~~~~~~g~~~vv~~~~~~~---~~~  243 (361)
                      +.+||+++.....+++|++++|+|+ |.+|++++++|+..|++|+.++++++++..+ +++|++.+++..+.+.   +..
T Consensus       124 ~~ta~~~l~~~~~~~~~~~vlI~ga~g~ig~~~~~~a~~~g~~v~~~~~~~~~~~~~-~~~g~~~v~~~~~~~~~~~~~~  202 (329)
T cd08250         124 GLTASIALEEVGEMKSGETVLVTAAAGGTGQFAVQLAKLAGCHVIGTCSSDEKAEFL-KSLGCDRPINYKTEDLGEVLKK  202 (329)
T ss_pred             HHHHHHHHHHhcCCCCCCEEEEEeCccHHHHHHHHHHHHcCCeEEEEeCcHHHHHHH-HHcCCceEEeCCCccHHHHHHH
Confidence            9999999988888899999999996 9999999999999999999999888777666 7899988887665432   222


Q ss_pred             hc-CCccEEEEcCCCcccHHHHHhccccCCEEEEecCCCCC-----------cccChHHHHhCCcEEEecccCC-----H
Q 018067          244 AM-GTMDGIIDTVSAVHPLMPLIGLLKSQGKLVLVGAPEKP-----------LELPAFSLLMGRKIVGGSMIGG-----M  306 (361)
Q Consensus       244 ~~-~g~d~vid~~g~~~~~~~~~~~l~~~G~~v~~g~~~~~-----------~~~~~~~~~~~~~~i~g~~~~~-----~  306 (361)
                      .. .++|++||++|+.. +..++++++++|+++.+|.....           ..++ ...+.++.++.++....     .
T Consensus       203 ~~~~~vd~v~~~~g~~~-~~~~~~~l~~~g~~v~~g~~~~~~~~~~~~~~~~~~~~-~~~~~~~~~~~~~~~~~~~~~~~  280 (329)
T cd08250         203 EYPKGVDVVYESVGGEM-FDTCVDNLALKGRLIVIGFISGYQSGTGPSPVKGATLP-PKLLAKSASVRGFFLPHYAKLIP  280 (329)
T ss_pred             hcCCCCeEEEECCcHHH-HHHHHHHhccCCeEEEEecccCCcccCccccccccccc-HHHhhcCceEEEEEhHHHHHHHH
Confidence            22 37999999999865 88999999999999999875421           1122 23456888888876543     2


Q ss_pred             HHHHHHHHHHHcCCCceeE---EEEecccHHHHHHHHHcCCCceEEEEE
Q 018067          307 KETQEMIDFAAKHNIRADI---EVIPADYVNTALERLAKADVRYRFVID  352 (361)
Q Consensus       307 ~~~~~~~~ll~~~~~~~~~---~~~~l~~~~~a~~~~~~~~~~gkvvi~  352 (361)
                      +.++++++++.++.+++..   +.++++++++|++.+.+++..+|++++
T Consensus       281 ~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~a~~~~~~~~~~~kvvv~  329 (329)
T cd08250         281 QHLDRLLQLYQRGKLVCEVDPTRFRGLESVADAVDYLYSGKNIGKVVVE  329 (329)
T ss_pred             HHHHHHHHHHHCCCeeeeECCccccCHHHHHHHHHHHHcCCCCceEEeC
Confidence            4578888999999988743   569999999999999998877898864

Includes Human Mgc45594 gene product of undetermined function. The medium chain dehydrogenases/reductase (MDR)/zinc-dependent alcohol dehydrogenase-like family, which contains the zinc-dependent alcohol dehydrogenase (ADH-Zn) and related proteins, is a diverse group of proteins related to the first identified member, class I mammalian ADH. MDRs display a broad range of activities and are distinguished from the smaller short chain dehydrogenases (~ 250 amino acids vs. the ~ 350 amino acids of the MDR). The MDR proteins have 2 domains: a C-terminal NAD(P) binding-Rossmann fold domain of a beta-alpha form and an N-terminal catalytic domain with distant homology to GroES.

>cd05282 ETR_like 2-enoyl thioester reductase-like

Probab=100.00  E-value=6.3e-36  Score=276.60  Aligned_cols=297  Identities=23%  Similarity=0.289  Sum_probs=249.6

Q ss_pred             cCCCC--CccceeeccCCCCCCeEEEEEeeeccCcchHHhHhcCCCC-CCCCCcccccccEEEEEeCCCCCCCCCCCEEE
Q 018067           19 KDTSG--VLSPFHFSRRATGEKDVTFKVTHCGICHSDLHMIKNEWGN-TIYPIVPGHEIVGVVTEVGSKVSKFKVGDKVG   95 (361)
Q Consensus        19 ~~~~~--~l~~~~~~~p~~~~~evlV~v~~~~i~~~D~~~~~g~~~~-~~~p~~lG~e~~G~Vv~vG~~v~~~~~GdrV~   95 (361)
                      ++.|.  .+++++.+.|.+.+++|+||++++++|+.|+..+.+.... ..+|.++|||++|+|+++|++++.+++||+|+
T Consensus         6 ~~~~~~~~~~~~~~~~~~~~~~~v~i~v~~~~~~~~d~~~~~~~~~~~~~~~~~~g~e~~G~v~~~G~~v~~~~~Gd~V~   85 (323)
T cd05282           6 FGEPLPLVLELVSLPIPPPGPGEVLVRMLAAPINPSDLITISGAYGSRPPLPAVPGNEGVGVVVEVGSGVSGLLVGQRVL   85 (323)
T ss_pred             CCCCccceEEeEeCCCCCCCCCeEEEEEEeccCCHHHHHHhcCcCCCCCCCCCcCCcceEEEEEEeCCCCCCCCCCCEEE
Confidence            34444  6778888899999999999999999999999988775532 34577999999999999999999999999997


Q ss_pred             eccccCCCCCCcccccCCCCCCcchhcccccccCCCCcCCCcceeEEeecCCceEECCCCCCcccccccchhhhhhhhHh
Q 018067           96 VGCMVGSCRSCDSCAIDLENYCPKVIMTYANKYHDGTITYGGYSDIMVADEHFVVRIPEGTPLDATAPLLCAGITVYSPL  175 (361)
Q Consensus        96 ~~~~~~~c~~c~~c~~~~~~~c~~~~~~~~~~~~~~~~~~g~~a~~v~v~~~~~~~ip~~~~~~~aa~l~~~~~ta~~~l  175 (361)
                      ..+                                   ..|+|++|+.++.+.++++|+++++.+++.+++.+.+||+++
T Consensus        86 ~~~-----------------------------------~~g~~~~~~~~~~~~~~~lp~~~~~~~~a~~~~~~~ta~~~~  130 (323)
T cd05282          86 PLG-----------------------------------GEGTWQEYVVAPADDLIPVPDSISDEQAAMLYINPLTAWLML  130 (323)
T ss_pred             EeC-----------------------------------CCCcceeEEecCHHHeEECCCCCCHHHHHHHhccHHHHHHHH
Confidence            421                                   168899999999999999999999999999999999999999


Q ss_pred             hhcCCCCCCCEEEEEcC-ChHHHHHHHHHHHcCCeEEEEeCCchhHHHHHHHcCCCEEecCCCHHH---HHHhcC--Ccc
Q 018067          176 RFYGLDKPGMHVGVVGL-GGLGHVAVKFAKAMGVKVTVISTSPSKKSEAIERLGADSFLVSRDQDE---MQAAMG--TMD  249 (361)
Q Consensus       176 ~~~~~~~~g~~vlV~Ga-g~vG~~a~~la~~~g~~vi~~~~~~~~~~~~~~~~g~~~vv~~~~~~~---~~~~~~--g~d  249 (361)
                      .....+.+|++|+|+|+ |.+|++++++|+++|+++++++++++++..+ +++|++.++++++.+.   +.+.+.  ++|
T Consensus       131 ~~~~~~~~~~~vlI~g~~~~vg~~~~~~a~~~g~~v~~~~~~~~~~~~~-~~~g~~~~~~~~~~~~~~~~~~~~~~~~~d  209 (323)
T cd05282         131 TEYLKLPPGDWVIQNAANSAVGRMLIQLAKLLGFKTINVVRRDEQVEEL-KALGADEVIDSSPEDLAQRVKEATGGAGAR  209 (323)
T ss_pred             HHhccCCCCCEEEEcccccHHHHHHHHHHHHCCCeEEEEecChHHHHHH-HhcCCCEEecccchhHHHHHHHHhcCCCce
Confidence            88887899999999987 9999999999999999999999998887666 7899999888876443   333333  799


Q ss_pred             EEEEcCCCcccHHHHHhccccCCEEEEecCCCCC-cccChHHHHhCCcEEEecccCCH----------HHHHHHHHHHHc
Q 018067          250 GIIDTVSAVHPLMPLIGLLKSQGKLVLVGAPEKP-LELPAFSLLMGRKIVGGSMIGGM----------KETQEMIDFAAK  318 (361)
Q Consensus       250 ~vid~~g~~~~~~~~~~~l~~~G~~v~~g~~~~~-~~~~~~~~~~~~~~i~g~~~~~~----------~~~~~~~~ll~~  318 (361)
                      ++||++|+.. ....+++++++|+++.+|..... ..++...+..++.++.+......          +.++++++++.+
T Consensus       210 ~vl~~~g~~~-~~~~~~~l~~~g~~v~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~  288 (323)
T cd05282         210 LALDAVGGES-ATRLARSLRPGGTLVNYGLLSGEPVPFPRSVFIFKDITVRGFWLRQWLHSATKEAKQETFAEVIKLVEA  288 (323)
T ss_pred             EEEECCCCHH-HHHHHHhhCCCCEEEEEccCCCCCCCCCHHHHhhcCceEEEEEehHhhccCCHHHHHHHHHHHHHHHhC
Confidence            9999999977 77889999999999999876442 45555555558888888765432          347778899999


Q ss_pred             CCCceeE-EEEecccHHHHHHHHHcCCCceEEEEE
Q 018067          319 HNIRADI-EVIPADYVNTALERLAKADVRYRFVID  352 (361)
Q Consensus       319 ~~~~~~~-~~~~l~~~~~a~~~~~~~~~~gkvvi~  352 (361)
                      +++.+.. +.++++++++||+.+.+++..+|++++
T Consensus       289 ~~l~~~~~~~~~~~~~~~a~~~~~~~~~~~kvv~~  323 (323)
T cd05282         289 GVLTTPVGAKFPLEDFEEAVAAAEQPGRGGKVLLT  323 (323)
T ss_pred             CCcccCccceecHHHHHHHHHHHhcCCCCceEeeC
Confidence            9988665 899999999999999998878998863

2-enoyl thioester reductase (ETR) catalyzes the NADPH-dependent conversion of trans-2-enoyl acyl carrier protein/coenzyme A (ACP/CoA) to acyl-(ACP/CoA) in fatty acid synthesis. 2-enoyl thioester reductase activity has been linked in Candida tropicalis as essential in maintaining mitiochondrial respiratory function. This ETR family is a part of the medium chain dehydrogenase/reductase family, but lack the zinc coordination sites characteristic of the alcohol dehydrogenases in this family. NAD(P)(H)-dependent oxidoreductases are the major enzymes in the interconversion of alcohols and aldehydes, or ketones. Alcohol dehydrogenase in the liver converts ethanol and NAD+ to acetaldehyde and NADH, while in yeast and some other microorganisms ADH catalyzes the conversion acetaldehyde to ethanol in alcoholic fermentation. ADH is a member of the medium chain alcohol dehydrogenase family (MDR), which has a NAD(P)(H)-binding domain in a Rossman

>cd08289 MDR_yhfp_like Yhfp putative quinone oxidoreductases

Probab=100.00  E-value=8.7e-36  Score=276.14  Aligned_cols=310  Identities=22%  Similarity=0.268  Sum_probs=240.0

Q ss_pred             cceeeeeecCCCCCccceeeccCCCCCCeEEEEEeeeccCcchHHhHhcCC-CCCCCCCcccccccEEEEEeCCCCCCCC
Q 018067           11 KNAFGWAAKDTSGVLSPFHFSRRATGEKDVTFKVTHCGICHSDLHMIKNEW-GNTIYPIVPGHEIVGVVTEVGSKVSKFK   89 (361)
Q Consensus        11 ~~~~~~~~~~~~~~l~~~~~~~p~~~~~evlV~v~~~~i~~~D~~~~~g~~-~~~~~p~~lG~e~~G~Vv~vG~~v~~~~   89 (361)
                      |+++.+...+++..+.+++++.|.+.++||+||+.++++|++|+....+.. ....+|.++|||++|+|+++|  +.+|+
T Consensus         1 ~~a~~~~~~~~~~~~~~~~~~~p~~~~~ev~i~v~~~~i~~~d~~~~~~~~~~~~~~~~~~g~e~~G~V~~~~--~~~~~   78 (326)
T cd08289           1 FQALVVEKDEDDVSVSVKNLTLDDLPEGDVLIRVAYSSVNYKDGLASIPGGKIVKRYPFIPGIDLAGTVVESN--DPRFK   78 (326)
T ss_pred             CeeEEEeccCCcceeEEEEccCCCCCCCeEEEEEEEEecChHHhhhhcCCccccCCCCcCcccceeEEEEEcC--CCCCC
Confidence            567777666666678888999999999999999999999999987664321 122458899999999999964  56799


Q ss_pred             CCCEEEeccccCCCCCCcccccCCCCCCcchhcccccccCCCCcCCCcceeEEeecCCceEECCCCCCcccccccchhhh
Q 018067           90 VGDKVGVGCMVGSCRSCDSCAIDLENYCPKVIMTYANKYHDGTITYGGYSDIMVADEHFVVRIPEGTPLDATAPLLCAGI  169 (361)
Q Consensus        90 ~GdrV~~~~~~~~c~~c~~c~~~~~~~c~~~~~~~~~~~~~~~~~~g~~a~~v~v~~~~~~~ip~~~~~~~aa~l~~~~~  169 (361)
                      +||+|+..+.                             ..+....|+|++|+.++.++++++|+++++++++.+++.+.
T Consensus        79 ~Gd~V~~~~~-----------------------------~~~~~~~g~~~~~~~v~~~~~~~~p~~~~~~~a~~~~~~~~  129 (326)
T cd08289          79 PGDEVIVTSY-----------------------------DLGVSHHGGYSEYARVPAEWVVPLPKGLTLKEAMILGTAGF  129 (326)
T ss_pred             CCCEEEEccc-----------------------------ccCCCCCCcceeEEEEcHHHeEECCCCCCHHHHhhhhhHHH
Confidence            9999975321                             01234579999999999999999999999999999999999


Q ss_pred             hhhhHhhhcCC---CCCCCEEEEEcC-ChHHHHHHHHHHHcCCeEEEEeCCchhHHHHHHHcCCCEEecCCCH--HHHHH
Q 018067          170 TVYSPLRFYGL---DKPGMHVGVVGL-GGLGHVAVKFAKAMGVKVTVISTSPSKKSEAIERLGADSFLVSRDQ--DEMQA  243 (361)
Q Consensus       170 ta~~~l~~~~~---~~~g~~vlV~Ga-g~vG~~a~~la~~~g~~vi~~~~~~~~~~~~~~~~g~~~vv~~~~~--~~~~~  243 (361)
                      |||.+++...+   ..++++|||+|+ |.+|++++++|+.+|++|++++++++++..+ +++|++.+++.++.  +.+..
T Consensus       130 ta~~~l~~~~~~~~~~~~~~vlI~g~~g~vg~~~~~~a~~~g~~v~~~~~~~~~~~~~-~~~g~~~v~~~~~~~~~~~~~  208 (326)
T cd08289         130 TAALSIHRLEENGLTPEQGPVLVTGATGGVGSLAVSILAKLGYEVVASTGKADAADYL-KKLGAKEVIPREELQEESIKP  208 (326)
T ss_pred             HHHHHHHHHHhcCCCCCCCEEEEEcCCchHHHHHHHHHHHCCCeEEEEecCHHHHHHH-HHcCCCEEEcchhHHHHHHHh
Confidence            99988764332   345789999998 9999999999999999999999988887666 78999888877653  22333


Q ss_pred             hc-CCccEEEEcCCCcccHHHHHhccccCCEEEEecCCCC-CcccChHHHHhCCcEEEecccCC--HHHHHHHHHHHHc-
Q 018067          244 AM-GTMDGIIDTVSAVHPLMPLIGLLKSQGKLVLVGAPEK-PLELPAFSLLMGRKIVGGSMIGG--MKETQEMIDFAAK-  318 (361)
Q Consensus       244 ~~-~g~d~vid~~g~~~~~~~~~~~l~~~G~~v~~g~~~~-~~~~~~~~~~~~~~~i~g~~~~~--~~~~~~~~~ll~~-  318 (361)
                      +. .++|++||++|+.. +..++++++++|+++.+|.... ...++...++.+++++.+.....  ......+++.+.. 
T Consensus       209 ~~~~~~d~vld~~g~~~-~~~~~~~l~~~G~~i~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  287 (326)
T cd08289         209 LEKQRWAGAVDPVGGKT-LAYLLSTLQYGGSVAVSGLTGGGEVETTVFPFILRGVNLLGIDSVECPMELRRRIWRRLATD  287 (326)
T ss_pred             hccCCcCEEEECCcHHH-HHHHHHHhhcCCEEEEEeecCCCCCCcchhhhhhccceEEEEEeEecCchHHHHHHHHHHhh
Confidence            33 37999999999865 8999999999999999997543 23444556667899998874321  1222333333222 


Q ss_pred             ---CCCcee-EEEEecccHHHHHHHHHcCCCceEEEEEe
Q 018067          319 ---HNIRAD-IEVIPADYVNTALERLAKADVRYRFVIDV  353 (361)
Q Consensus       319 ---~~~~~~-~~~~~l~~~~~a~~~~~~~~~~gkvvi~~  353 (361)
                         ..+... .++++++++++||+.+.+++..||+++.+
T Consensus       288 ~~~~~~~~~~~~~~~l~~~~~a~~~~~~~~~~gkvvv~~  326 (326)
T cd08289         288 LKPTQLLNEIKQEITLDELPEALKQILQGRVTGRTVVKL  326 (326)
T ss_pred             cCccccccccceEeeHHHHHHHHHHHhcCcccceEEEeC
Confidence               222223 48999999999999999999889999864

yhfp putative quinone oxidoreductases (QOR). QOR catalyzes the conversion of a quinone + NAD(P)H to a hydroquinone + NAD(P)+. Quinones are cyclic diones derived from aromatic compounds. Membrane bound QOR actin the respiratory chains of bacteria and mitochondria, while soluble QOR acts to protect from toxic quinones (e.g. DT-diaphorase) or as a soluble eye-lens protein in some vertebrates (e.g. zeta-crystalin). QOR reduces quinones through a semi-quinone intermediate via a NAD(P)H-dependent single electron transfer. QOR is a member of the medium chain dehydrogenase/reductase family, but lacks the zinc-binding sites of the prototypical alcohol dehydrogenases of this group. NAD(P)(H)-dependent oxidoreductases are the major enzymes in the interconversion of alcohols and aldehydes, or ketones. Alcohol dehydrogenase in the liver converts ethanol and NAD+ to acetaldehyde and NADH, while in yeast and some other microorganisms ADH

>cd08243 quinone_oxidoreductase_like_1 Quinone oxidoreductase (QOR)

Probab=100.00  E-value=1.5e-35  Score=273.45  Aligned_cols=308  Identities=21%  Similarity=0.250  Sum_probs=248.6

Q ss_pred             cceeeeeecCCCCCccceeeccCCCCCCeEEEEEeeeccCcchHHhHhcCCCCCCCCCcccccccEEEEEeCCCCCCCCC
Q 018067           11 KNAFGWAAKDTSGVLSPFHFSRRATGEKDVTFKVTHCGICHSDLHMIKNEWGNTIYPIVPGHEIVGVVTEVGSKVSKFKV   90 (361)
Q Consensus        11 ~~~~~~~~~~~~~~l~~~~~~~p~~~~~evlV~v~~~~i~~~D~~~~~g~~~~~~~p~~lG~e~~G~Vv~vG~~v~~~~~   90 (361)
                      |+++.+...+.+..+++.+.+.|.+.++||+||++++++|++|++...+..+....|.++|||++|+|+++|+  ..+++
T Consensus         1 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~v~v~~~~i~~~d~~~~~~~~~~~~~~~~~g~e~~G~v~~vG~--~~~~~   78 (320)
T cd08243           1 MKAIVIEQPGGPEVLKLREIPIPEPKPGWVLIRVKAFGLNRSEIFTRQGHSPSVKFPRVLGIEAVGEVEEAPG--GTFTP   78 (320)
T ss_pred             CeEEEEcCCCCccceEEeecCCCCCCCCEEEEEEEEEecCHHHHHHhcCCCCCCCCCccccceeEEEEEEecC--CCCCC
Confidence            5666765544455677777788889999999999999999999999888665456678999999999999995  57999


Q ss_pred             CCEEEeccccCCCCCCcccccCCCCCCcchhcccccccCCCCcCCCcceeEEeecCCceEECCCCCCcccccccchhhhh
Q 018067           91 GDKVGVGCMVGSCRSCDSCAIDLENYCPKVIMTYANKYHDGTITYGGYSDIMVADEHFVVRIPEGTPLDATAPLLCAGIT  170 (361)
Q Consensus        91 GdrV~~~~~~~~c~~c~~c~~~~~~~c~~~~~~~~~~~~~~~~~~g~~a~~v~v~~~~~~~ip~~~~~~~aa~l~~~~~t  170 (361)
                      ||+|+.....                             .+....|+|++|+.++.+.++++|+++++++++.+++++.+
T Consensus        79 Gd~V~~~~~~-----------------------------~~~~~~g~~~~~~~~~~~~~~~ip~~~~~~~aa~~~~~~~t  129 (320)
T cd08243          79 GQRVATAMGG-----------------------------MGRTFDGSYAEYTLVPNEQVYAIDSDLSWAELAALPETYYT  129 (320)
T ss_pred             CCEEEEecCC-----------------------------CCCCCCcccceEEEcCHHHcEeCCCCCCHHHHHhcchHHHH
Confidence            9999753210                             01234689999999999999999999999999999999999


Q ss_pred             hhhHhhhcCCCCCCCEEEEEcC-ChHHHHHHHHHHHcCCeEEEEeCCchhHHHHHHHcCCCEEecCCC--HHHHHHhcCC
Q 018067          171 VYSPLRFYGLDKPGMHVGVVGL-GGLGHVAVKFAKAMGVKVTVISTSPSKKSEAIERLGADSFLVSRD--QDEMQAAMGT  247 (361)
Q Consensus       171 a~~~l~~~~~~~~g~~vlV~Ga-g~vG~~a~~la~~~g~~vi~~~~~~~~~~~~~~~~g~~~vv~~~~--~~~~~~~~~g  247 (361)
                      ||+++.....+++|++|+|+|+ |.+|++++++|+.+|++|+.++++++++..+ +++|++++++...  .+.+.....+
T Consensus       130 a~~~l~~~~~~~~g~~vlV~ga~g~~g~~~~~~a~~~g~~v~~~~~~~~~~~~~-~~~g~~~~~~~~~~~~~~i~~~~~~  208 (320)
T cd08243         130 AWGSLFRSLGLQPGDTLLIRGGTSSVGLAALKLAKALGATVTATTRSPERAALL-KELGADEVVIDDGAIAEQLRAAPGG  208 (320)
T ss_pred             HHHHHHHhcCCCCCCEEEEEcCCChHHHHHHHHHHHcCCEEEEEeCCHHHHHHH-HhcCCcEEEecCccHHHHHHHhCCC
Confidence            9999988888899999999997 9999999999999999999999888777666 7899988765432  2334444347


Q ss_pred             ccEEEEcCCCcccHHHHHhccccCCEEEEecCCCCCc---ccChHHHH--hCCcEEEecccCC--HHHHHHHHHHHHcCC
Q 018067          248 MDGIIDTVSAVHPLMPLIGLLKSQGKLVLVGAPEKPL---ELPAFSLL--MGRKIVGGSMIGG--MKETQEMIDFAAKHN  320 (361)
Q Consensus       248 ~d~vid~~g~~~~~~~~~~~l~~~G~~v~~g~~~~~~---~~~~~~~~--~~~~~i~g~~~~~--~~~~~~~~~ll~~~~  320 (361)
                      +|+++|++|+.. +..++++++++|+++.+|......   ........  .+++++.++....  .+.+++++++++++.
T Consensus       209 ~d~vl~~~~~~~-~~~~~~~l~~~g~~v~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  287 (320)
T cd08243         209 FDKVLELVGTAT-LKDSLRHLRPGGIVCMTGLLGGQWTLEDFNPMDDIPSGVNLTLTGSSSGDVPQTPLQELFDFVAAGH  287 (320)
T ss_pred             ceEEEECCChHH-HHHHHHHhccCCEEEEEccCCCCcccCCcchhhhhhhccceEEEecchhhhhHHHHHHHHHHHHCCc
Confidence            999999999865 899999999999999999753322   12222222  5677777765433  245788899999998


Q ss_pred             CceeE-EEEecccHHHHHHHHHcCCCceEEEE
Q 018067          321 IRADI-EVIPADYVNTALERLAKADVRYRFVI  351 (361)
Q Consensus       321 ~~~~~-~~~~l~~~~~a~~~~~~~~~~gkvvi  351 (361)
                      +++.. +.++++++++|++.+.+++..+|+++
T Consensus       288 ~~~~~~~~~~l~~~~~a~~~~~~~~~~~kvvv  319 (320)
T cd08243         288 LDIPPSKVFTFDEIVEAHAYMESNRAFGKVVV  319 (320)
T ss_pred             eecccccEEcHHHHHHHHHHHHhCCCCCcEEe
Confidence            87644 89999999999999998888889886

NAD(P)(H)-dependent oxidoreductases are the major enzymes in the interconversion of alcohols and aldehydes, or ketones. The medium chain alcohol dehydrogenase family (MDR) have a NAD(P)(H)-binding domain in a Rossmann fold of a beta-alpha form. The N-terminal region typically has an all-beta catalytic domain. These proteins typically form dimers (typically higher plants, mammals) or tetramers (yeast, bacteria), and have 2 tightly bound zinc atoms per subunit.

>COG2130 Putative NADP-dependent oxidoreductases [General function prediction only]

Probab=100.00  E-value=4.4e-36  Score=259.02  Aligned_cols=293  Identities=20%  Similarity=0.170  Sum_probs=243.0

Q ss_pred             CCccceeeccCCCCCCeEEEEEeeeccCcchHHhHhcCCCCCCCCCcccccccEEEEEeC--CCCCCCCCCCEEEecccc
Q 018067           23 GVLSPFHFSRRATGEKDVTFKVTHCGICHSDLHMIKNEWGNTIYPIVPGHEIVGVVTEVG--SKVSKFKVGDKVGVGCMV  100 (361)
Q Consensus        23 ~~l~~~~~~~p~~~~~evlV~v~~~~i~~~D~~~~~g~~~~~~~p~~lG~e~~G~Vv~vG--~~v~~~~~GdrV~~~~~~  100 (361)
                      +++++++.++|+|+++|||||+++.+++|-- +.+....+....|..+|...+|.+|...  |+..+|++||.|.     
T Consensus        25 d~F~lee~~vp~p~~GqvLl~~~ylS~DPym-Rgrm~d~~SY~~P~~lG~~~~gg~V~~Vv~S~~~~f~~GD~V~-----   98 (340)
T COG2130          25 DDFRLEEVDVPEPGEGQVLLRTLYLSLDPYM-RGRMSDAPSYAPPVELGEVMVGGTVAKVVASNHPGFQPGDIVV-----   98 (340)
T ss_pred             CCceeEeccCCCCCcCceEEEEEEeccCHHH-eecccCCcccCCCcCCCceeECCeeEEEEecCCCCCCCCCEEE-----
Confidence            6799999999999999999999999999832 2222233344668888877766554332  5677899999996     


Q ss_pred             CCCCCCcccccCCCCCCcchhcccccccCCCCcCCCcceeEEeecCCceEECCCCCCccc--ccccchhhhhhhhHhhhc
Q 018067          101 GSCRSCDSCAIDLENYCPKVIMTYANKYHDGTITYGGYSDIMVADEHFVVRIPEGTPLDA--TAPLLCAGITVYSPLRFY  178 (361)
Q Consensus       101 ~~c~~c~~c~~~~~~~c~~~~~~~~~~~~~~~~~~g~~a~~v~v~~~~~~~ip~~~~~~~--aa~l~~~~~ta~~~l~~~  178 (361)
                                                       ...+|++|..++.+.+.+++++.-+..  ...|..+..|||.+|.++
T Consensus        99 ---------------------------------~~~GWq~y~i~~~~~l~Kvd~~~~pl~~~LgvLGmpG~TAY~gLl~i  145 (340)
T COG2130          99 ---------------------------------GVSGWQEYAISDGEGLRKLDPSPAPLSAYLGVLGMPGLTAYFGLLDI  145 (340)
T ss_pred             ---------------------------------ecccceEEEeechhhceecCCCCCCcchHHhhcCCchHHHHHHHHHh
Confidence                                             345799999999999999997753333  347889999999999999


Q ss_pred             CCCCCCCEEEEEcC-ChHHHHHHHHHHHcCCeEEEEeCCchhHHHHHHHcCCCEEecCCCHHHHHHhc----CCccEEEE
Q 018067          179 GLDKPGMHVGVVGL-GGLGHVAVKFAKAMGVKVTVISTSPSKKSEAIERLGADSFLVSRDQDEMQAAM----GTMDGIID  253 (361)
Q Consensus       179 ~~~~~g~~vlV~Ga-g~vG~~a~~la~~~g~~vi~~~~~~~~~~~~~~~~g~~~vv~~~~~~~~~~~~----~g~d~vid  253 (361)
                      ++.++|++|+|-+| |++|..+.|+||..|++|+.++.++++.+.+.+++|.+..+||+.++..+++.    .|+|+.||
T Consensus       146 gqpk~GetvvVSaAaGaVGsvvgQiAKlkG~rVVGiaGg~eK~~~l~~~lGfD~~idyk~~d~~~~L~~a~P~GIDvyfe  225 (340)
T COG2130         146 GQPKAGETVVVSAAAGAVGSVVGQIAKLKGCRVVGIAGGAEKCDFLTEELGFDAGIDYKAEDFAQALKEACPKGIDVYFE  225 (340)
T ss_pred             cCCCCCCEEEEEecccccchHHHHHHHhhCCeEEEecCCHHHHHHHHHhcCCceeeecCcccHHHHHHHHCCCCeEEEEE
Confidence            99999999999987 99999999999999999999999999999997779999999999987666554    48999999


Q ss_pred             cCCCcccHHHHHhccccCCEEEEecCCCCCc----c---cChHHHHhCCcEEEecccCC-H-----HHHHHHHHHHHcCC
Q 018067          254 TVSAVHPLMPLIGLLKSQGKLVLVGAPEKPL----E---LPAFSLLMGRKIVGGSMIGG-M-----KETQEMIDFAAKHN  320 (361)
Q Consensus       254 ~~g~~~~~~~~~~~l~~~G~~v~~g~~~~~~----~---~~~~~~~~~~~~i~g~~~~~-~-----~~~~~~~~ll~~~~  320 (361)
                      ++|++. ++..+..|...+|++++|..+...    .   -....++.+++++.|....+ .     +-.+++..++++|+
T Consensus       226 NVGg~v-~DAv~~~ln~~aRi~~CG~IS~YN~~~~~~gp~~l~~l~~kr~~v~Gfiv~~~~~~~~~e~~~~l~~wv~~GK  304 (340)
T COG2130         226 NVGGEV-LDAVLPLLNLFARIPVCGAISQYNAPELPPGPRRLPLLMAKRLRVQGFIVASDYDQRFPEALRELGGWVKEGK  304 (340)
T ss_pred             cCCchH-HHHHHHhhccccceeeeeehhhcCCCCCCCCcchhhHHHhhhheeEEEEechhhhhhhHHHHHHHHHHHHcCc
Confidence            999998 999999999999999999865311    1   12234667899999987622 1     45678889999999


Q ss_pred             CceeEE-EEecccHHHHHHHHHcCCCceEEEEEeCC
Q 018067          321 IRADIE-VIPADYVNTALERLAKADVRYRFVIDVAN  355 (361)
Q Consensus       321 ~~~~~~-~~~l~~~~~a~~~~~~~~~~gkvvi~~~~  355 (361)
                      ++.... +-.|+.+++||..|.++++.||+|+++.+
T Consensus       305 i~~~eti~dGlEnaP~Af~gLl~G~N~GK~vvKv~~  340 (340)
T COG2130         305 IQYRETIVDGLENAPEAFIGLLSGKNFGKLVVKVAD  340 (340)
T ss_pred             eeeEeeehhhhhccHHHHHHHhcCCccceEEEEecC
Confidence            998885 55799999999999999999999999864

>cd08252 AL_MDR Arginate lyase and other MDR family members

Probab=100.00  E-value=3.3e-35  Score=273.42  Aligned_cols=307  Identities=20%  Similarity=0.256  Sum_probs=249.6

Q ss_pred             cceeeeeecCCCC---CccceeeccCCCCCCeEEEEEeeeccCcchHHhHhcCCCCCCCCCcccccccEEEEEeCCCCCC
Q 018067           11 KNAFGWAAKDTSG---VLSPFHFSRRATGEKDVTFKVTHCGICHSDLHMIKNEWGNTIYPIVPGHEIVGVVTEVGSKVSK   87 (361)
Q Consensus        11 ~~~~~~~~~~~~~---~l~~~~~~~p~~~~~evlV~v~~~~i~~~D~~~~~g~~~~~~~p~~lG~e~~G~Vv~vG~~v~~   87 (361)
                      |+++.+...+.+.   .++.++++.|.+.+++|+|++.++++|++|++.+.+..+...+|.++|||++|+|+++|+++..
T Consensus         1 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~v~v~~~~i~~~d~~~~~~~~~~~~~~~~~g~e~~G~v~~~G~~v~~   80 (336)
T cd08252           1 MKAIGFTQPLPITDPDSLIDIELPKPVPGGRDLLVRVEAVSVNPVDTKVRAGGAPVPGQPKILGWDASGVVEAVGSEVTL   80 (336)
T ss_pred             CceEEecCCCCCCcccceeEccCCCCCCCCCEEEEEEEEEEcCHHHHHHHcCCCCCCCCCcccccceEEEEEEcCCCCCC
Confidence            5677776665554   3667788889999999999999999999999988776553456778999999999999999999


Q ss_pred             CCCCCEEEeccccCCCCCCcccccCCCCCCcchhcccccccCCCCcCCCcceeEEeecCCceEECCCCCCcccccccchh
Q 018067           88 FKVGDKVGVGCMVGSCRSCDSCAIDLENYCPKVIMTYANKYHDGTITYGGYSDIMVADEHFVVRIPEGTPLDATAPLLCA  167 (361)
Q Consensus        88 ~~~GdrV~~~~~~~~c~~c~~c~~~~~~~c~~~~~~~~~~~~~~~~~~g~~a~~v~v~~~~~~~ip~~~~~~~aa~l~~~  167 (361)
                      |++||+|.....                                ....|+|++|+.++.++++++|+++++++++.+++.
T Consensus        81 ~~~Gd~V~~~~~--------------------------------~~~~g~~~~~~~v~~~~~~~ip~~~~~~~~~~~~~~  128 (336)
T cd08252          81 FKVGDEVYYAGD--------------------------------ITRPGSNAEYQLVDERIVGHKPKSLSFAEAAALPLT  128 (336)
T ss_pred             CCCCCEEEEcCC--------------------------------CCCCccceEEEEEchHHeeeCCCCCCHHHhhhhhhH
Confidence            999999974210                                124689999999999999999999999999999999


Q ss_pred             hhhhhhHhhhcCCCCC-----CCEEEEEcC-ChHHHHHHHHHHHcC-CeEEEEeCCchhHHHHHHHcCCCEEecCCC--H
Q 018067          168 GITVYSPLRFYGLDKP-----GMHVGVVGL-GGLGHVAVKFAKAMG-VKVTVISTSPSKKSEAIERLGADSFLVSRD--Q  238 (361)
Q Consensus       168 ~~ta~~~l~~~~~~~~-----g~~vlV~Ga-g~vG~~a~~la~~~g-~~vi~~~~~~~~~~~~~~~~g~~~vv~~~~--~  238 (361)
                      +.+||+++.....+++     |++|+|+|+ |.+|++++++|+.+| ++|++++++++++..+ +++|++.+++.+.  .
T Consensus       129 ~~ta~~~l~~~~~~~~~~~~~g~~vlV~g~~g~vg~~~~~~a~~~G~~~v~~~~~~~~~~~~~-~~~g~~~~~~~~~~~~  207 (336)
T cd08252         129 SLTAWEALFDRLGISEDAENEGKTLLIIGGAGGVGSIAIQLAKQLTGLTVIATASRPESIAWV-KELGADHVINHHQDLA  207 (336)
T ss_pred             HHHHHHHHHHhcCCCCCcCCCCCEEEEEcCCchHHHHHHHHHHHcCCcEEEEEcCChhhHHHH-HhcCCcEEEeCCccHH
Confidence            9999999877777777     999999986 999999999999999 8999998888777666 7899988887764  1


Q ss_pred             HHHHHhc-CCccEEEEcCCCcccHHHHHhccccCCEEEEecCCCCCcccChHHHHhCCcEEEecccCC------------
Q 018067          239 DEMQAAM-GTMDGIIDTVSAVHPLMPLIGLLKSQGKLVLVGAPEKPLELPAFSLLMGRKIVGGSMIGG------------  305 (361)
Q Consensus       239 ~~~~~~~-~g~d~vid~~g~~~~~~~~~~~l~~~G~~v~~g~~~~~~~~~~~~~~~~~~~i~g~~~~~------------  305 (361)
                      +.+.... .++|++||++|+...+..++++++++|+++.+|...  ..++...++.+++++.+.....            
T Consensus       208 ~~i~~~~~~~~d~vl~~~~~~~~~~~~~~~l~~~g~~v~~g~~~--~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  285 (336)
T cd08252         208 EQLEALGIEPVDYIFCLTDTDQHWDAMAELIAPQGHICLIVDPQ--EPLDLGPLKSKSASFHWEFMFTRSMFQTPDMIEQ  285 (336)
T ss_pred             HHHHhhCCCCCCEEEEccCcHHHHHHHHHHhcCCCEEEEecCCC--CcccchhhhcccceEEEEEeeccccccccchhhH
Confidence            2233333 379999999997555899999999999999998653  3344444446778777644321            


Q ss_pred             HHHHHHHHHHHHcCCCceeE----EEEecccHHHHHHHHHcCCCceEEEEE
Q 018067          306 MKETQEMIDFAAKHNIRADI----EVIPADYVNTALERLAKADVRYRFVID  352 (361)
Q Consensus       306 ~~~~~~~~~ll~~~~~~~~~----~~~~l~~~~~a~~~~~~~~~~gkvvi~  352 (361)
                      .+.++++++++.++.+++..    +.++++++++|++.+.+++..+|++++
T Consensus       286 ~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~a~~~~~~~~~~~~vv~~  336 (336)
T cd08252         286 HEILNEVADLLDAGKLKTTLTETLGPINAENLREAHALLESGKTIGKIVLE  336 (336)
T ss_pred             HHHHHHHHHHHHCCCEecceeeeecCCCHHHHHHHHHHHHcCCccceEEeC
Confidence            13477889999999988653    357999999999999999888998863

This group contains a structure identified as an arginate lyase. Other members are identified quinone reductases, alginate lyases, and other proteins related to the zinc-dependent dehydrogenases/reductases. QOR catalyzes the conversion of a quinone and NAD(P)H to a hydroquinone and NAD(P+. Quinones are cyclic diones derived from aromatic compounds. Membrane bound QOR acts in the respiratory chains of bacteria and mitochondria, while soluble QOR acts to protect from toxic quinones (e.g. DT-diaphorase) or as a soluble eye-lens protein in some vertebrates (e.g. zeta-crystalin). QOR reduces quinones through a semi-quinone intermediate via a NAD(P)H-dependent single electron transfer. QOR is a member of the medium chain dehydrogenase/reductase family, but lacks the zinc-binding sites of the prototypical alcohol dehydrogenases of this group. Alcohol dehydrogenase in the liver converts ethanol and NAD+ to acetaldehyde and NADH, whil

>cd08249 enoyl_reductase_like enoyl_reductase_like

Probab=100.00  E-value=2.1e-35  Score=275.12  Aligned_cols=311  Identities=23%  Similarity=0.255  Sum_probs=241.8

Q ss_pred             cceeeeeecCCCCCccceeeccCCCCCCeEEEEEeeeccCcchHHhHhcCCCCCCCCCcccccccEEEEEeCCCCCCCCC
Q 018067           11 KNAFGWAAKDTSGVLSPFHFSRRATGEKDVTFKVTHCGICHSDLHMIKNEWGNTIYPIVPGHEIVGVVTEVGSKVSKFKV   90 (361)
Q Consensus        11 ~~~~~~~~~~~~~~l~~~~~~~p~~~~~evlV~v~~~~i~~~D~~~~~g~~~~~~~p~~lG~e~~G~Vv~vG~~v~~~~~   90 (361)
                      |+++.+...+ +..+++++++.|.++++||+|+++++++|++|+....+.. ....|.++|||++|+|+.+|++++.|++
T Consensus         1 m~a~~~~~~~-~~~~~~~~~~~p~~~~~ev~i~v~~~~i~~~d~~~~~~~~-~~~~~~~~g~e~~G~v~~vG~~v~~~~~   78 (339)
T cd08249           1 QKAAVLTGPG-GGLLVVVDVPVPKPGPDEVLVKVKAVALNPVDWKHQDYGF-IPSYPAILGCDFAGTVVEVGSGVTRFKV   78 (339)
T ss_pred             CceEEeccCC-CCcccccCCCCCCCCCCEEEEEEEEEEcCchheeeeeccc-ccCCCceeeeeeeEEEEEeCCCcCcCCC
Confidence            5667766544 6889999999999999999999999999999998775543 1235678999999999999999999999


Q ss_pred             CCEEEeccccCCCCCCcccccCCCCCCcchhcccccccCCCCcCCCcceeEEeecCCceEECCCCCCcccccccchhhhh
Q 018067           91 GDKVGVGCMVGSCRSCDSCAIDLENYCPKVIMTYANKYHDGTITYGGYSDIMVADEHFVVRIPEGTPLDATAPLLCAGIT  170 (361)
Q Consensus        91 GdrV~~~~~~~~c~~c~~c~~~~~~~c~~~~~~~~~~~~~~~~~~g~~a~~v~v~~~~~~~ip~~~~~~~aa~l~~~~~t  170 (361)
                      ||+|+..+.. .|+                          +...+|+|++|+.++.+.++++|+++++++++.+++.+.+
T Consensus        79 Gd~V~~~~~~-~~~--------------------------~~~~~g~~~~~~~v~~~~~~~ip~~~~~~~~~~~~~~~~t  131 (339)
T cd08249          79 GDRVAGFVHG-GNP--------------------------NDPRNGAFQEYVVADADLTAKIPDNISFEEAATLPVGLVT  131 (339)
T ss_pred             CCEEEEEecc-ccC--------------------------CCCCCCcccceEEechhheEECCCCCCHHHceecchHHHH
Confidence            9999854321 000                          1235799999999999999999999999999999999999


Q ss_pred             hhhHhhhcCCC----------CCCCEEEEEcC-ChHHHHHHHHHHHcCCeEEEEeCCchhHHHHHHHcCCCEEecCCCHH
Q 018067          171 VYSPLRFYGLD----------KPGMHVGVVGL-GGLGHVAVKFAKAMGVKVTVISTSPSKKSEAIERLGADSFLVSRDQD  239 (361)
Q Consensus       171 a~~~l~~~~~~----------~~g~~vlV~Ga-g~vG~~a~~la~~~g~~vi~~~~~~~~~~~~~~~~g~~~vv~~~~~~  239 (361)
                      ||+++....++          +++++|+|+|+ |.+|++++++|+.+|++|+.++ +++++..+ +++|+++++++++.+
T Consensus       132 a~~~l~~~~~~~~~~~~~~~~~~~~~vlI~ga~g~vg~~~~~~a~~~G~~v~~~~-~~~~~~~~-~~~g~~~v~~~~~~~  209 (339)
T cd08249         132 AALALFQKLGLPLPPPKPSPASKGKPVLIWGGSSSVGTLAIQLAKLAGYKVITTA-SPKNFDLV-KSLGADAVFDYHDPD  209 (339)
T ss_pred             HHHHHhccccCCCCCCCCCCCCCCCEEEEEcChhHHHHHHHHHHHHcCCeEEEEE-CcccHHHH-HhcCCCEEEECCCch
Confidence            99998766544          78999999997 9999999999999999999887 45555555 889999988887644


Q ss_pred             H---HHHhc-CCccEEEEcCCCcccHHHHHhcccc--CCEEEEecCCCCCcccChHHHHhCCcEEEec-------ccCCH
Q 018067          240 E---MQAAM-GTMDGIIDTVSAVHPLMPLIGLLKS--QGKLVLVGAPEKPLELPAFSLLMGRKIVGGS-------MIGGM  306 (361)
Q Consensus       240 ~---~~~~~-~g~d~vid~~g~~~~~~~~~~~l~~--~G~~v~~g~~~~~~~~~~~~~~~~~~~i~g~-------~~~~~  306 (361)
                      .   +..+. +++|++||++|++..+..+++++++  +|+++.+|.......+.. ......+.....       .....
T Consensus       210 ~~~~l~~~~~~~~d~vl~~~g~~~~~~~~~~~l~~~~~g~~v~~g~~~~~~~~~~-~~~~~~~~~~~~~~~~~~~~~~~~  288 (339)
T cd08249         210 VVEDIRAATGGKLRYALDCISTPESAQLCAEALGRSGGGKLVSLLPVPEETEPRK-GVKVKFVLGYTVFGEIPEDREFGE  288 (339)
T ss_pred             HHHHHHHhcCCCeeEEEEeeccchHHHHHHHHHhccCCCEEEEecCCCccccCCC-CceEEEEEeeeecccccccccchH
Confidence            3   33333 3799999999984558999999999  999999987543221110 110011111111       01112


Q ss_pred             HHHHHHHHHHHcCCCceeE-EEEe--cccHHHHHHHHHcCC-CceEEEEEe
Q 018067          307 KETQEMIDFAAKHNIRADI-EVIP--ADYVNTALERLAKAD-VRYRFVIDV  353 (361)
Q Consensus       307 ~~~~~~~~ll~~~~~~~~~-~~~~--l~~~~~a~~~~~~~~-~~gkvvi~~  353 (361)
                      ..++++++++.++++.+.. ..++  ++++++||+.+.+++ ..+|+++++
T Consensus       289 ~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~a~~~~~~~~~~~~kvvv~~  339 (339)
T cd08249         289 VFWKYLPELLEEGKLKPHPVRVVEGGLEGVQEGLDLLRKGKVSGEKLVVRL  339 (339)
T ss_pred             HHHHHHHHHHHcCCccCCCceecCCcHHHHHHHHHHHHCCCccceEEEEeC
Confidence            4577888999999988654 6777  999999999999998 789999874

Member identified as possible enoyl reductase of the MDR family. 2-enoyl thioester reductase (ETR) catalyzes the NADPH-dependent dependent conversion of trans-2-enoyl acyl carrier protein/coenzyme A (ACP/CoA) to acyl-(ACP/CoA) in fatty acid synthesis. 2-enoyl thioester reductase activity has been linked in Candida tropicalis as essential in maintaining mitiochondrial respiratory function. This ETR family is a part of the medium chain dehydrogenase/reductase family, but lack the zinc coordination sites characteristic of the alcohol dehydrogenases in this family. NAD(P)(H)-dependent oxidoreductases are the major enzymes in the interconversion of alcohols and aldehydes, or ketones. Alcohol dehydrogenase in the liver converts ethanol and NAD+ to acetaldehyde and NADH, while in yeast and some other microorganisms ADH catalyzes the conversion acetaldehyde to ethanol in alcoholic fermentation. ADH is a member of the medium chain alcohol de

>cd08248 RTN4I1 Human Reticulon 4 Interacting Protein 1

Probab=100.00  E-value=4.9e-35  Score=273.82  Aligned_cols=306  Identities=25%  Similarity=0.312  Sum_probs=241.6

Q ss_pred             cceeeeeecCCCC-CccceeeccCCC-CCCeEEEEEeeeccCcchHHhHhcCCC---------------CCCCCCccccc
Q 018067           11 KNAFGWAAKDTSG-VLSPFHFSRRAT-GEKDVTFKVTHCGICHSDLHMIKNEWG---------------NTIYPIVPGHE   73 (361)
Q Consensus        11 ~~~~~~~~~~~~~-~l~~~~~~~p~~-~~~evlV~v~~~~i~~~D~~~~~g~~~---------------~~~~p~~lG~e   73 (361)
                      |+++.+..+++|+ .+++++.+.|.| .++||+|+++++++|++|++.+.|...               ...+|.++|||
T Consensus         1 ~~a~~~~~~~~~~~~~~~~~~~~p~~~~~~ev~v~v~~~~i~~~d~~~~~g~~~~~~~~~~~~~~~~~~~~~~p~~~G~e   80 (350)
T cd08248           1 MKAWQIHSYGGIDSLLLLENARIPVIRKPNQVLIKVHAASVNPIDVLMRSGYGRTLLNKKRKPQSCKYSGIEFPLTLGRD   80 (350)
T ss_pred             CceEEecccCCCcceeeecccCCCCCCCCCeEEEEEEEEecCchhHHHHcCCccchhhhhhccccccccCCCCCeeecce
Confidence            6777776655543 377888999999 499999999999999999998877421               23568899999


Q ss_pred             ccEEEEEeCCCCCCCCCCCEEEeccccCCCCCCcccccCCCCCCcchhcccccccCCCCcCCCcceeEEeecCCceEECC
Q 018067           74 IVGVVTEVGSKVSKFKVGDKVGVGCMVGSCRSCDSCAIDLENYCPKVIMTYANKYHDGTITYGGYSDIMVADEHFVVRIP  153 (361)
Q Consensus        74 ~~G~Vv~vG~~v~~~~~GdrV~~~~~~~~c~~c~~c~~~~~~~c~~~~~~~~~~~~~~~~~~g~~a~~v~v~~~~~~~ip  153 (361)
                      ++|+|+++|+++++|++||||+..+.                                ....|+|++|+.++.+.++++|
T Consensus        81 ~~G~v~~vG~~v~~~~~Gd~V~~~~~--------------------------------~~~~g~~~~~~~v~~~~~~~lp  128 (350)
T cd08248          81 CSGVVVDIGSGVKSFEIGDEVWGAVP--------------------------------PWSQGTHAEYVVVPENEVSKKP  128 (350)
T ss_pred             eEEEEEecCCCcccCCCCCEEEEecC--------------------------------CCCCccceeEEEecHHHeecCC
Confidence            99999999999999999999975321                                1246899999999999999999


Q ss_pred             CCCCcccccccchhhhhhhhHhhhcCCCCC----CCEEEEEcC-ChHHHHHHHHHHHcCCeEEEEeCCchhHHHHHHHcC
Q 018067          154 EGTPLDATAPLLCAGITVYSPLRFYGLDKP----GMHVGVVGL-GGLGHVAVKFAKAMGVKVTVISTSPSKKSEAIERLG  228 (361)
Q Consensus       154 ~~~~~~~aa~l~~~~~ta~~~l~~~~~~~~----g~~vlV~Ga-g~vG~~a~~la~~~g~~vi~~~~~~~~~~~~~~~~g  228 (361)
                      +++++++++.+++.+.+||+++.....+.+    |++|+|+|+ |.+|++++++|+.+|++|++++++ + +.++++++|
T Consensus       129 ~~~~~~~aa~~~~~~~ta~~~l~~~~~~~~~~~~g~~vlI~g~~g~ig~~~~~~a~~~G~~v~~~~~~-~-~~~~~~~~g  206 (350)
T cd08248         129 KNLSHEEAASLPYAGLTAWSALVNVGGLNPKNAAGKRVLILGGSGGVGTFAIQLLKAWGAHVTTTCST-D-AIPLVKSLG  206 (350)
T ss_pred             CCCCHHHHhhchhHHHHHHHHHHHhccCCCccCCCCEEEEECCCChHHHHHHHHHHHCCCeEEEEeCc-c-hHHHHHHhC
Confidence            999999999999999999999987776654    999999996 999999999999999999887764 3 455668899


Q ss_pred             CCEEecCCCHHHHHHhc--CCccEEEEcCCCcccHHHHHhccccCCEEEEecCCCCC----cccC--h----HHHHh---
Q 018067          229 ADSFLVSRDQDEMQAAM--GTMDGIIDTVSAVHPLMPLIGLLKSQGKLVLVGAPEKP----LELP--A----FSLLM---  293 (361)
Q Consensus       229 ~~~vv~~~~~~~~~~~~--~g~d~vid~~g~~~~~~~~~~~l~~~G~~v~~g~~~~~----~~~~--~----~~~~~---  293 (361)
                      .+.+++..+.+....+.  .++|++||++|+.. +..++++++++|+++.+|.....    ..+.  .    ..+..   
T Consensus       207 ~~~~~~~~~~~~~~~l~~~~~vd~vi~~~g~~~-~~~~~~~l~~~G~~v~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~  285 (350)
T cd08248         207 ADDVIDYNNEDFEEELTERGKFDVILDTVGGDT-EKWALKLLKKGGTYVTLVSPLLKNTDKLGLVGGMLKSAVDLLKKNV  285 (350)
T ss_pred             CceEEECCChhHHHHHHhcCCCCEEEECCChHH-HHHHHHHhccCCEEEEecCCcccccccccccchhhhhHHHHHHHHH
Confidence            98888877655444443  47999999999885 89999999999999999854211    0110  0    01111   


Q ss_pred             ----CCcEE-EecccCCHHHHHHHHHHHHcCCCceeE-EEEecccHHHHHHHHHcCCCceEEEE
Q 018067          294 ----GRKIV-GGSMIGGMKETQEMIDFAAKHNIRADI-EVIPADYVNTALERLAKADVRYRFVI  351 (361)
Q Consensus       294 ----~~~~i-~g~~~~~~~~~~~~~~ll~~~~~~~~~-~~~~l~~~~~a~~~~~~~~~~gkvvi  351 (361)
                          +...+ .+........+.++++++.++.+.+.+ +.|++++++++++.+.+++..+|+++
T Consensus       286 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~a~~~~~~~~~~~~vv~  349 (350)
T cd08248         286 KSLLKGSHYRWGFFSPSGSALDELAKLVEDGKIKPVIDKVFPFEEVPEAYEKVESGHARGKTVI  349 (350)
T ss_pred             HHHhcCCCeeEEEECCCHHHHHHHHHHHhCCCEecccceeecHHHHHHHHHHHhcCCCceEEEe
Confidence                11111 111223356789999999999987655 89999999999999998887788886

Human Reticulon 4 Interacting Protein 1 is a member of the medium chain dehydrogenase/ reductase (MDR) family. Riticulons are endoplasmic reticulum associated proteins involved in membrane trafficking and neuroendocrine secretion. The MDR/zinc-dependent alcohol dehydrogenase-like family, which contains the zinc-dependent alcohol dehydrogenase (ADH-Zn) and related proteins, is a diverse group of proteins related to the first identified member, class I mammalian ADH. MDRs display a broad range of activities and are distinguished from the smaller short chain dehydrogenases (~ 250 amino acids vs. the ~ 350 amino acids of the MDR). The MDR proteins have 2 domains: a C-terminal NAD(P) binding-Rossmann fold domain of a beta-alpha form and an N-terminal catalytic domain with distant homology to GroES.

>cd08269 Zn_ADH9 Alcohol dehydrogenases of the MDR family

Probab=100.00  E-value=1.6e-34  Score=265.82  Aligned_cols=291  Identities=23%  Similarity=0.318  Sum_probs=236.8

Q ss_pred             CCCCccceeeccCCCCCCeEEEEEeeeccCcchHHhH-hcCCCC--CCCCCcccccccEEEEEeCCCCCCCCCCCEEEec
Q 018067           21 TSGVLSPFHFSRRATGEKDVTFKVTHCGICHSDLHMI-KNEWGN--TIYPIVPGHEIVGVVTEVGSKVSKFKVGDKVGVG   97 (361)
Q Consensus        21 ~~~~l~~~~~~~p~~~~~evlV~v~~~~i~~~D~~~~-~g~~~~--~~~p~~lG~e~~G~Vv~vG~~v~~~~~GdrV~~~   97 (361)
                      +++.+++++++.|+++++||+||+.++++|++|++.+ .|....  +.+|.++|+|++|+|+++|+.++.+++||+|+. 
T Consensus         3 ~~~~~~~~~~~~~~l~~~ev~v~v~~~~i~~~d~~~~~~g~~~~~~~~~~~~~g~e~~G~V~~vG~~v~~~~~Gd~V~~-   81 (312)
T cd08269           3 GPGRFEVEEHPRPTPGPGQVLVRVEGCGVCGSDLPAFNQGRPWFVYPAEPGGPGHEGWGRVVALGPGVRGLAVGDRVAG-   81 (312)
T ss_pred             CCCeeEEEECCCCCCCCCeEEEEEEEeeecccchHHHccCCCCcccCCCCcccceeeEEEEEEECCCCcCCCCCCEEEE-
Confidence            4567889999999999999999999999999999887 664421  234779999999999999999999999999974 


Q ss_pred             cccCCCCCCcccccCCCCCCcchhcccccccCCCCcCCCcceeEEeecCCceEECCCCCCcccccccchhhhhhhhHhhh
Q 018067           98 CMVGSCRSCDSCAIDLENYCPKVIMTYANKYHDGTITYGGYSDIMVADEHFVVRIPEGTPLDATAPLLCAGITVYSPLRF  177 (361)
Q Consensus        98 ~~~~~c~~c~~c~~~~~~~c~~~~~~~~~~~~~~~~~~g~~a~~v~v~~~~~~~ip~~~~~~~aa~l~~~~~ta~~~l~~  177 (361)
                                                         ...|+|++|+.++.+.++++|+++  ..++.+..++.++|++++ 
T Consensus        82 -----------------------------------~~~g~~~~~~~v~~~~~~~lP~~~--~~~~~~~~~~~~a~~~~~-  123 (312)
T cd08269          82 -----------------------------------LSGGAFAEYDLADADHAVPLPSLL--DGQAFPGEPLGCALNVFR-  123 (312)
T ss_pred             -----------------------------------ecCCcceeeEEEchhheEECCCch--hhhHHhhhhHHHHHHHHH-
Confidence                                               236889999999999999999998  233322367888999887 


Q ss_pred             cCCCCCCCEEEEEcCChHHHHHHHHHHHcCCe-EEEEeCCchhHHHHHHHcCCCEEecCCCHH---HHHHhcC--CccEE
Q 018067          178 YGLDKPGMHVGVVGLGGLGHVAVKFAKAMGVK-VTVISTSPSKKSEAIERLGADSFLVSRDQD---EMQAAMG--TMDGI  251 (361)
Q Consensus       178 ~~~~~~g~~vlV~Gag~vG~~a~~la~~~g~~-vi~~~~~~~~~~~~~~~~g~~~vv~~~~~~---~~~~~~~--g~d~v  251 (361)
                      ..++++|++|+|+|+|.+|++++++|+.+|++ |+++++.+++.. +.+++|++.+++.+..+   .+.++..  ++|++
T Consensus       124 ~~~~~~~~~vlI~g~g~vg~~~~~la~~~g~~~v~~~~~~~~~~~-~~~~~g~~~~~~~~~~~~~~~l~~~~~~~~vd~v  202 (312)
T cd08269         124 RGWIRAGKTVAVIGAGFIGLLFLQLAAAAGARRVIAIDRRPARLA-LARELGATEVVTDDSEAIVERVRELTGGAGADVV  202 (312)
T ss_pred             hcCCCCCCEEEEECCCHHHHHHHHHHHHcCCcEEEEECCCHHHHH-HHHHhCCceEecCCCcCHHHHHHHHcCCCCCCEE
Confidence            67789999999998899999999999999998 888877766654 66889998888765543   3334433  79999


Q ss_pred             EEcCCCcccHHHHHhccccCCEEEEecCCC-CCcccChHHHHhCCcEEEecccCC----HHHHHHHHHHHHcCCCce--e
Q 018067          252 IDTVSAVHPLMPLIGLLKSQGKLVLVGAPE-KPLELPAFSLLMGRKIVGGSMIGG----MKETQEMIDFAAKHNIRA--D  324 (361)
Q Consensus       252 id~~g~~~~~~~~~~~l~~~G~~v~~g~~~-~~~~~~~~~~~~~~~~i~g~~~~~----~~~~~~~~~ll~~~~~~~--~  324 (361)
                      ||++|+......++++++++|+++.+|... ....+++..+..+++.+.+.....    .+.++++++++.++++++  .
T Consensus       203 ld~~g~~~~~~~~~~~l~~~g~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~  282 (312)
T cd08269         203 IEAVGHQWPLDLAGELVAERGRLVIFGYHQDGPRPVPFQTWNWKGIDLINAVERDPRIGLEGMREAVKLIADGRLDLGSL  282 (312)
T ss_pred             EECCCCHHHHHHHHHHhccCCEEEEEccCCCCCcccCHHHHhhcCCEEEEecccCccchhhHHHHHHHHHHcCCCCchhh
Confidence            999987666889999999999999998654 234455556677888887765433    367899999999999886  2


Q ss_pred             E-EEEecccHHHHHHHHHcCCC-ceEEEE
Q 018067          325 I-EVIPADYVNTALERLAKADV-RYRFVI  351 (361)
Q Consensus       325 ~-~~~~l~~~~~a~~~~~~~~~-~gkvvi  351 (361)
                      + +.++++++++|++.+.+++. .+|+++
T Consensus       283 ~~~~~~~~~~~~a~~~~~~~~~~~~~~~~  311 (312)
T cd08269         283 LTHEFPLEELGDAFEAARRRPDGFIKGVI  311 (312)
T ss_pred             eeeeecHHHHHHHHHHHHhCCCCceEEEe
Confidence            3 78999999999999999865 388876

The medium chain dehydrogenases/reductase (MDR)/zinc-dependent alcohol dehydrogenase-like family, which contains the zinc-dependent alcohol dehydrogenase (ADH-Zn) and related proteins, is a diverse group of proteins related to the first identified member, class I mammalian ADH. MDRs display a broad range of activities and are distinguished from the smaller short chain dehydrogenases (~ 250 amino acids vs. the ~ 350 amino acids of the MDR). The MDR proteins have 2 domains: a C-terminal NAD(P)-binding Rossmann fold domain of a beta-alpha form and an N-terminal catalytic domain with distant homology to GroES. The MDR group contains a host of activities, including the founding alcohol dehydrogenase (ADH), quinone reductase, sorbitol dehydrogenase, formaldehyde dehydrogenase, butanediol DH, ketose reductase, cinnamyl reductase, and numerous others. The zinc-dependent alcohol dehydrogenases (ADHs) catalyze the NAD(P)(H)-dependent i

>cd08288 MDR_yhdh Yhdh putative quinone oxidoreductases

Probab=100.00  E-value=3.3e-34  Score=265.30  Aligned_cols=310  Identities=23%  Similarity=0.278  Sum_probs=247.0

Q ss_pred             cceeeeeecCCCCCccceeeccCCCCCCeEEEEEeeeccCcchHHhHhcCCC-CCCCCCcccccccEEEEEeCCCCCCCC
Q 018067           11 KNAFGWAAKDTSGVLSPFHFSRRATGEKDVTFKVTHCGICHSDLHMIKNEWG-NTIYPIVPGHEIVGVVTEVGSKVSKFK   89 (361)
Q Consensus        11 ~~~~~~~~~~~~~~l~~~~~~~p~~~~~evlV~v~~~~i~~~D~~~~~g~~~-~~~~p~~lG~e~~G~Vv~vG~~v~~~~   89 (361)
                      |+++.+...++++.++++++|.|.++++||+|++.++++|++|+..+.|..+ ...+|.++|||++|+|++  +++++++
T Consensus         1 ~~a~~~~~~~~~~~~~~~~~~~p~~~~~~v~v~v~~~~i~~~d~~~~~g~~~~~~~~~~~~g~e~~G~V~~--~~~~~~~   78 (324)
T cd08288           1 FKALVLEKDDGGTSAELRELDESDLPEGDVTVEVHYSTLNYKDGLAITGKGGIVRTFPLVPGIDLAGTVVE--SSSPRFK   78 (324)
T ss_pred             CeeEEEeccCCCcceEEEECCCCCCCCCeEEEEEEEEecCHHHHHHhcCCccccCCCCCccccceEEEEEe--CCCCCCC
Confidence            6777776666666889999999999999999999999999999998877643 234578899999999998  7777899


Q ss_pred             CCCEEEeccccCCCCCCcccccCCCCCCcchhcccccccCCCCcCCCcceeEEeecCCceEECCCCCCcccccccchhhh
Q 018067           90 VGDKVGVGCMVGSCRSCDSCAIDLENYCPKVIMTYANKYHDGTITYGGYSDIMVADEHFVVRIPEGTPLDATAPLLCAGI  169 (361)
Q Consensus        90 ~GdrV~~~~~~~~c~~c~~c~~~~~~~c~~~~~~~~~~~~~~~~~~g~~a~~v~v~~~~~~~ip~~~~~~~aa~l~~~~~  169 (361)
                      +||+|+....                             ..+....|+|++|+.++.+.++++|+++++++++.+++.+.
T Consensus        79 ~Gd~V~~~~~-----------------------------~~~~~~~g~~~~~~~v~~~~~~~lp~~~~~~~~~~~~~~~~  129 (324)
T cd08288          79 PGDRVVLTGW-----------------------------GVGERHWGGYAQRARVKADWLVPLPEGLSARQAMAIGTAGF  129 (324)
T ss_pred             CCCEEEECCc-----------------------------cCCCCCCCcceeEEEEchHHeeeCCCCCCHHHHhhhhhHHH
Confidence            9999975210                             00112478999999999999999999999999999999999


Q ss_pred             hhhhHhh---hcCCCCCCCEEEEEcC-ChHHHHHHHHHHHcCCeEEEEeCCchhHHHHHHHcCCCEEecCCCHHH-HHHh
Q 018067          170 TVYSPLR---FYGLDKPGMHVGVVGL-GGLGHVAVKFAKAMGVKVTVISTSPSKKSEAIERLGADSFLVSRDQDE-MQAA  244 (361)
Q Consensus       170 ta~~~l~---~~~~~~~g~~vlV~Ga-g~vG~~a~~la~~~g~~vi~~~~~~~~~~~~~~~~g~~~vv~~~~~~~-~~~~  244 (361)
                      +++.++.   .....+++++|+|+|+ |.+|++++|+|+.+|++|++++.+++++..+ +++|+++++++++.+. +..+
T Consensus       130 ta~~~~~~~~~~~~~~~~~~vlI~ga~g~vg~~~~~~A~~~G~~vi~~~~~~~~~~~~-~~~g~~~~~~~~~~~~~~~~~  208 (324)
T cd08288         130 TAMLCVMALEDHGVTPGDGPVLVTGAAGGVGSVAVALLARLGYEVVASTGRPEEADYL-RSLGASEIIDRAELSEPGRPL  208 (324)
T ss_pred             HHHHHHHHHhhcCcCCCCCEEEEECCCcHHHHHHHHHHHHCCCeEEEEeCCHHHHHHH-HhcCCCEEEEcchhhHhhhhh
Confidence            9887764   3333236789999998 9999999999999999999998888877666 8899999888775432 2333


Q ss_pred             c-CCccEEEEcCCCcccHHHHHhccccCCEEEEecCCCC-CcccChHHHHhCCcEEEecccCC------HHHHHHHHHHH
Q 018067          245 M-GTMDGIIDTVSAVHPLMPLIGLLKSQGKLVLVGAPEK-PLELPAFSLLMGRKIVGGSMIGG------MKETQEMIDFA  316 (361)
Q Consensus       245 ~-~g~d~vid~~g~~~~~~~~~~~l~~~G~~v~~g~~~~-~~~~~~~~~~~~~~~i~g~~~~~------~~~~~~~~~ll  316 (361)
                      . .++|.+||++++.. +..++..++.+|+++.+|.... ...++...++.++.++.+.....      .+.++.+.+++
T Consensus       209 ~~~~~~~~~d~~~~~~-~~~~~~~~~~~g~~~~~G~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  287 (324)
T cd08288         209 QKERWAGAVDTVGGHT-LANVLAQTRYGGAVAACGLAGGADLPTTVMPFILRGVTLLGIDSVMAPIERRRAAWARLARDL  287 (324)
T ss_pred             ccCcccEEEECCcHHH-HHHHHHHhcCCCEEEEEEecCCCCCCcchhhhhccccEEEEEEeecccchhhHHHHHHHHHHH
Confidence            3 36899999999854 7788888999999999987532 22344444557889988864211      23466677788


Q ss_pred             HcCCCceeEEEEecccHHHHHHHHHcCCCceEEEEEe
Q 018067          317 AKHNIRADIEVIPADYVNTALERLAKADVRYRFVIDV  353 (361)
Q Consensus       317 ~~~~~~~~~~~~~l~~~~~a~~~~~~~~~~gkvvi~~  353 (361)
                      .++.+.+..+.++++++++|++.+.+++..+|+++.+
T Consensus       288 ~~~~~~~i~~~~~~~~~~~a~~~~~~~~~~~~vvv~~  324 (324)
T cd08288         288 DPALLEALTREIPLADVPDAAEAILAGQVRGRVVVDV  324 (324)
T ss_pred             hcCCccccceeecHHHHHHHHHHHhcCCccCeEEEeC
Confidence            8888876568999999999999999999889999864

Yhdh putative quinone oxidoreductases (QOR). QOR catalyzes the conversion of a quinone + NAD(P)H to a hydroquinone + NAD(P)+. Quinones are cyclic diones derived from aromatic compounds. Membrane bound QOR actin the respiratory chains of bacteria and mitochondria, while soluble QOR acts to protect from toxic quinones (e.g. DT-diaphorase) or as a soluble eye-lens protein in some vertebrates (e.g. zeta-crystalin). QOR reduces quinones through a semi-quinone intermediate via a NAD(P)H-dependent single electron transfer. QOR is a member of the medium chain dehydrogenase/reductase family, but lacks the zinc-binding sites of the prototypical alcohol dehydrogenases of this group. NAD(P)(H)-dependent oxidoreductases are the major enzymes in the interconversion of alcohols and aldehydes, or ketones. Alcohol dehydrogenase in the liver converts ethanol and NAD+ to acetaldehyde and NADH, while in yeast and some other microorganisms ADH catal

>cd05276 p53_inducible_oxidoreductase PIG3 p53-inducible quinone oxidoreductase

Probab=100.00  E-value=4.5e-34  Score=263.22  Aligned_cols=304  Identities=28%  Similarity=0.335  Sum_probs=251.1

Q ss_pred             cceeeeeecCCCCCccceeeccCCCCCCeEEEEEeeeccCcchHHhHhcCCC-CCCCCCcccccccEEEEEeCCCCCCCC
Q 018067           11 KNAFGWAAKDTSGVLSPFHFSRRATGEKDVTFKVTHCGICHSDLHMIKNEWG-NTIYPIVPGHEIVGVVTEVGSKVSKFK   89 (361)
Q Consensus        11 ~~~~~~~~~~~~~~l~~~~~~~p~~~~~evlV~v~~~~i~~~D~~~~~g~~~-~~~~p~~lG~e~~G~Vv~vG~~v~~~~   89 (361)
                      |+++.+...+.++.+++.+.+.|.+.+++++||+.++++|+.|++...+..+ ...+|.++|||++|+|+++|+++..++
T Consensus         1 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~v~v~~~~i~~~d~~~~~~~~~~~~~~~~~~g~e~~G~v~~vg~~~~~~~   80 (323)
T cd05276           1 MKAIVIKEPGGPEVLELGEVPKPAPGPGEVLIRVAAAGVNRADLLQRQGLYPPPPGASDILGLEVAGVVVAVGPGVTGWK   80 (323)
T ss_pred             CeEEEEecCCCcccceEEecCCCCCCCCEEEEEEEEeecCHHHHHHhCCCCCCCCCCCCcccceeEEEEEeeCCCCCCCC
Confidence            5677776655677788888888889999999999999999999998877543 235678999999999999999999999


Q ss_pred             CCCEEEeccccCCCCCCcccccCCCCCCcchhcccccccCCCCcCCCcceeEEeecCCceEECCCCCCcccccccchhhh
Q 018067           90 VGDKVGVGCMVGSCRSCDSCAIDLENYCPKVIMTYANKYHDGTITYGGYSDIMVADEHFVVRIPEGTPLDATAPLLCAGI  169 (361)
Q Consensus        90 ~GdrV~~~~~~~~c~~c~~c~~~~~~~c~~~~~~~~~~~~~~~~~~g~~a~~v~v~~~~~~~ip~~~~~~~aa~l~~~~~  169 (361)
                      +||+|+..                                   ..+|+|++|+.++.+.++++|+++++.+++.++..+.
T Consensus        81 ~Gd~V~~~-----------------------------------~~~g~~~~~~~~~~~~~~~~p~~~~~~~~~~l~~~~~  125 (323)
T cd05276          81 VGDRVCAL-----------------------------------LAGGGYAEYVVVPAGQLLPVPEGLSLVEAAALPEVFF  125 (323)
T ss_pred             CCCEEEEe-----------------------------------cCCCceeEEEEcCHHHhccCCCCCCHHHHhhchhHHH
Confidence            99999731                                   2458999999999999999999999999999999999


Q ss_pred             hhhhHhhhcCCCCCCCEEEEEcC-ChHHHHHHHHHHHcCCeEEEEeCCchhHHHHHHHcCCCEEecCCCHHHHH---Hhc
Q 018067          170 TVYSPLRFYGLDKPGMHVGVVGL-GGLGHVAVKFAKAMGVKVTVISTSPSKKSEAIERLGADSFLVSRDQDEMQ---AAM  245 (361)
Q Consensus       170 ta~~~l~~~~~~~~g~~vlV~Ga-g~vG~~a~~la~~~g~~vi~~~~~~~~~~~~~~~~g~~~vv~~~~~~~~~---~~~  245 (361)
                      ++|+++.+...+.++++|+|+|+ |.+|++++++++..|++++++++++++...+ +++|++.+++....+...   ...
T Consensus       126 ~a~~~~~~~~~~~~~~~vlv~g~~~~ig~~~~~~~~~~g~~v~~~~~~~~~~~~~-~~~g~~~~~~~~~~~~~~~~~~~~  204 (323)
T cd05276         126 TAWQNLFQLGGLKAGETVLIHGGASGVGTAAIQLAKALGARVIATAGSEEKLEAC-RALGADVAINYRTEDFAEEVKEAT  204 (323)
T ss_pred             HHHHHHHHhcCCCCCCEEEEEcCcChHHHHHHHHHHHcCCEEEEEcCCHHHHHHH-HHcCCCEEEeCCchhHHHHHHHHh
Confidence            99999887777899999999997 9999999999999999999998887776666 778988888776644322   332


Q ss_pred             --CCccEEEEcCCCcccHHHHHhccccCCEEEEecCCCC-CcccChHHHHhCCcEEEecccCCH----------HHHHHH
Q 018067          246 --GTMDGIIDTVSAVHPLMPLIGLLKSQGKLVLVGAPEK-PLELPAFSLLMGRKIVGGSMIGGM----------KETQEM  312 (361)
Q Consensus       246 --~g~d~vid~~g~~~~~~~~~~~l~~~G~~v~~g~~~~-~~~~~~~~~~~~~~~i~g~~~~~~----------~~~~~~  312 (361)
                        .++|++||++|+.. ...++++++++|+++.+|..+. ...++...++.+++++.++.....          +.+.++
T Consensus       205 ~~~~~d~vi~~~g~~~-~~~~~~~~~~~g~~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  283 (323)
T cd05276         205 GGRGVDVILDMVGGDY-LARNLRALAPDGRLVLIGLLGGAKAELDLAPLLRKRLTLTGSTLRSRSLEEKAALAAAFREHV  283 (323)
T ss_pred             CCCCeEEEEECCchHH-HHHHHHhhccCCEEEEEecCCCCCCCCchHHHHHhCCeEEEeeccchhhhccHHHHHHHHHHH
Confidence              37999999999877 8889999999999999986543 234445555568888888765432          235667


Q ss_pred             HHHHHcCCCceeE-EEEecccHHHHHHHHHcCCCceEEEE
Q 018067          313 IDFAAKHNIRADI-EVIPADYVNTALERLAKADVRYRFVI  351 (361)
Q Consensus       313 ~~ll~~~~~~~~~-~~~~l~~~~~a~~~~~~~~~~gkvvi  351 (361)
                      ++++.++++++.. +.|++++++++++.+.+++..+|+++
T Consensus       284 ~~~~~~~~~~~~~~~~~~~~~~~~a~~~~~~~~~~~kvv~  323 (323)
T cd05276         284 WPLFASGRIRPVIDKVFPLEEAAEAHRRMESNEHIGKIVL  323 (323)
T ss_pred             HHHHHCCCccCCcceEEcHHHHHHHHHHHHhCCCcceEeC
Confidence            8888889887655 89999999999999998887788773

PIG3 p53-inducible quinone oxidoreductase, a medium chain dehydrogenase/reductase family member, acts in the apoptotic pathway. PIG3 reduces ortho-quinones, but its apoptotic activity has been attributed to oxidative stress generation, since overexpression of PIG3 accumulates reactive oxygen species. PIG3 resembles the MDR family member quinone reductases, which catalyze the reduction of quinone to hydroxyquinone. NAD(P)(H)-dependent oxidoreductases are the major enzymes in the interconversion of alcohols and aldehydes or ketones. Alcohol dehydrogenase in the liver converts ethanol and NAD+ to acetaldehyde and NADH, while in yeast and some other microorganisms ADH catalyzes the conversion acetaldehyde to ethanol in alcoholic fermentation. ADH is a member of the medium chain alcohol dehydrogenase family (MDR), which has a NAD(P)(H)-binding domain in a Rossmann fold of a beta-alpha form. The NAD(H)-binding

>cd08253 zeta_crystallin Zeta-crystallin with NADP-dependent quinone reductase activity (QOR)

Probab=100.00  E-value=5e-34  Score=263.31  Aligned_cols=311  Identities=24%  Similarity=0.308  Sum_probs=253.4

Q ss_pred             cceeeeeecCCCCCccceeeccCCCCCCeEEEEEeeeccCcchHHhHhcCCC-CCCCCCcccccccEEEEEeCCCCCCCC
Q 018067           11 KNAFGWAAKDTSGVLSPFHFSRRATGEKDVTFKVTHCGICHSDLHMIKNEWG-NTIYPIVPGHEIVGVVTEVGSKVSKFK   89 (361)
Q Consensus        11 ~~~~~~~~~~~~~~l~~~~~~~p~~~~~evlV~v~~~~i~~~D~~~~~g~~~-~~~~p~~lG~e~~G~Vv~vG~~v~~~~   89 (361)
                      |+++.+..++.+..+++.+++.|.+.+++++|++.++++|++|+..+.|... ...+|.++|||++|+|+++|+++.+|+
T Consensus         1 ~~~~~~~~~~~~~~~~~~~~~~~~l~~~~v~i~v~~~~i~~~d~~~~~g~~~~~~~~~~~~g~e~~G~v~~~g~~~~~~~   80 (325)
T cd08253           1 MRAIRYHEFGAPDVLRLGDLPVPTPGPGEVLVRVHASGVNPVDTYIRAGAYPGLPPLPYVPGSDGAGVVEAVGEGVDGLK   80 (325)
T ss_pred             CceEEEcccCCcccceeeecCCCCCCCCEEEEEEEEEecChhHhhhccCCCCCCCCCCeecccceEEEEEeeCCCCCCCC
Confidence            5677777666667788889999999999999999999999999998877553 235678999999999999999999999


Q ss_pred             CCCEEEeccccCCCCCCcccccCCCCCCcchhcccccccCCCCcCCCcceeEEeecCCceEECCCCCCcccccccchhhh
Q 018067           90 VGDKVGVGCMVGSCRSCDSCAIDLENYCPKVIMTYANKYHDGTITYGGYSDIMVADEHFVVRIPEGTPLDATAPLLCAGI  169 (361)
Q Consensus        90 ~GdrV~~~~~~~~c~~c~~c~~~~~~~c~~~~~~~~~~~~~~~~~~g~~a~~v~v~~~~~~~ip~~~~~~~aa~l~~~~~  169 (361)
                      +||+|+..+..                              .....|++++|+.++.+.++++|+++++++++.+++++.
T Consensus        81 ~Gd~v~~~~~~------------------------------~~~~~g~~~~~~~~~~~~~~~ip~~~~~~~aa~~~~~~~  130 (325)
T cd08253          81 VGDRVWLTNLG------------------------------WGRRQGTAAEYVVVPADQLVPLPDGVSFEQGAALGIPAL  130 (325)
T ss_pred             CCCEEEEeccc------------------------------cCCCCcceeeEEEecHHHcEeCCCCCCHHHHhhhhhHHH
Confidence            99999753210                              012468899999999999999999999999999999999


Q ss_pred             hhhhHhhhcCCCCCCCEEEEEcC-ChHHHHHHHHHHHcCCeEEEEeCCchhHHHHHHHcCCCEEecCCCHHHH---HHhc
Q 018067          170 TVYSPLRFYGLDKPGMHVGVVGL-GGLGHVAVKFAKAMGVKVTVISTSPSKKSEAIERLGADSFLVSRDQDEM---QAAM  245 (361)
Q Consensus       170 ta~~~l~~~~~~~~g~~vlV~Ga-g~vG~~a~~la~~~g~~vi~~~~~~~~~~~~~~~~g~~~vv~~~~~~~~---~~~~  245 (361)
                      +||+++.....+++|++++|+|+ |.+|++++++++.+|++|++++++++++..+ +++|++.+++....+..   ....
T Consensus       131 ~a~~~l~~~~~~~~g~~vlI~g~~~~~g~~~~~~a~~~g~~v~~~~~~~~~~~~~-~~~g~~~~~~~~~~~~~~~~~~~~  209 (325)
T cd08253         131 TAYRALFHRAGAKAGETVLVHGGSGAVGHAAVQLARWAGARVIATASSAEGAELV-RQAGADAVFNYRAEDLADRILAAT  209 (325)
T ss_pred             HHHHHHHHHhCCCCCCEEEEEcCCchHHHHHHHHHHHcCCEEEEEeCCHHHHHHH-HHcCCCEEEeCCCcCHHHHHHHHc
Confidence            99999988778899999999997 9999999999999999999999888777666 67899888877664433   3332


Q ss_pred             --CCccEEEEcCCCcccHHHHHhccccCCEEEEecCCCCCcccChHHHHhCCcEEEecccCCH------HHHHHHHHHHH
Q 018067          246 --GTMDGIIDTVSAVHPLMPLIGLLKSQGKLVLVGAPEKPLELPAFSLLMGRKIVGGSMIGGM------KETQEMIDFAA  317 (361)
Q Consensus       246 --~g~d~vid~~g~~~~~~~~~~~l~~~G~~v~~g~~~~~~~~~~~~~~~~~~~i~g~~~~~~------~~~~~~~~ll~  317 (361)
                        .++|+++|++|+.. ....+++++++|+++.+|.......++...++.++.++.+......      +.++.+.+++.
T Consensus       210 ~~~~~d~vi~~~~~~~-~~~~~~~l~~~g~~v~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  288 (325)
T cd08253         210 AGQGVDVIIEVLANVN-LAKDLDVLAPGGRIVVYGSGGLRGTIPINPLMAKEASIRGVLLYTATPEERAAAAEAIAAGLA  288 (325)
T ss_pred             CCCceEEEEECCchHH-HHHHHHhhCCCCEEEEEeecCCcCCCChhHHHhcCceEEeeehhhcCHHHHHHHHHHHHHHHH
Confidence              37999999999876 7889999999999999987543334444444567777776543321      23555667788


Q ss_pred             cCCCceeE-EEEecccHHHHHHHHHcCCCceEEEEEe
Q 018067          318 KHNIRADI-EVIPADYVNTALERLAKADVRYRFVIDV  353 (361)
Q Consensus       318 ~~~~~~~~-~~~~l~~~~~a~~~~~~~~~~gkvvi~~  353 (361)
                      ++.+++.. +.+++++++++++.+.+++..||+++.+
T Consensus       289 ~~~i~~~~~~~~~~~~~~~~~~~~~~~~~~~kvv~~~  325 (325)
T cd08253         289 DGALRPVIAREYPLEEAAAAHEAVESGGAIGKVVLDP  325 (325)
T ss_pred             CCCccCccccEEcHHHHHHHHHHHHcCCCcceEEEeC
Confidence            88877655 8999999999999999988889999863

Zeta-crystallin is a eye lens protein with NADP-dependent quinone reductase activity (QOR). It has been cited as a structural component in mammalian eyes, but also has homology to quinone reductases in unrelated species. QOR catalyzes the conversion of a quinone and NAD(P)H to a hydroquinone and NAD(P+. Quinones are cyclic diones derived from aromatic compounds. Membrane bound QOR acts in the respiratory chains of bacteria and mitochondria, while soluble QOR acts to protect from toxic quinones (e.g. DT-diaphorase) or as a soluble eye-lens protein in some vertebrates (e.g. zeta-crystalin). QOR reduces quinones through a semi-quinone intermediate via a NAD(P)H-dependent single electron transfer. QOR is a member of the medium chain dehydrogenase/reductase family, but lacks the zinc-binding sites of the prototypical alcohol dehydrogenases of this group. Alcohol dehydrogenase in the liver converts

>cd05288 PGDH Prostaglandin dehydrogenases

Probab=100.00  E-value=8.7e-34  Score=263.05  Aligned_cols=299  Identities=21%  Similarity=0.204  Sum_probs=237.5

Q ss_pred             ceeeeeecC----CCCCccceeeccCCCCCCeEEEEEeeeccCcchHHhHhcCCCC---CCCCCcccccccEEEEEeCCC
Q 018067           12 NAFGWAAKD----TSGVLSPFHFSRRATGEKDVTFKVTHCGICHSDLHMIKNEWGN---TIYPIVPGHEIVGVVTEVGSK   84 (361)
Q Consensus        12 ~~~~~~~~~----~~~~l~~~~~~~p~~~~~evlV~v~~~~i~~~D~~~~~g~~~~---~~~p~~lG~e~~G~Vv~vG~~   84 (361)
                      +++.+....    .++.+++++++.|++.+++|+||+.++++|+.|.....+....   ...+.++|+|++|+|+++|+.
T Consensus         3 ~~~~~~~~~~~~~~~~~~~~~~~~~p~~~~~~v~Vkv~~~~i~~~~~~~~~~~~~~~~~~~~~~~~g~e~~G~V~~~G~~   82 (329)
T cd05288           3 RQVVLAKRPEGPPPPDDFELVEVPLPELKDGEVLVRTLYLSVDPYMRGWMSDAKSYSPPVQLGEPMRGGGVGEVVESRSP   82 (329)
T ss_pred             cEEEEeccCCCCCCccceeEEeccCCCCCCCeEEEEEEEEecCHHHhhhhccCcccCCCccCCCcccCceEEEEEecCCC
Confidence            445554433    4567888899999999999999999999999887655543211   122457899999999999964


Q ss_pred             CCCCCCCCEEEeccccCCCCCCcccccCCCCCCcchhcccccccCCCCcCCCcceeEEeecC-CceEECCCCCC--cccc
Q 018067           85 VSKFKVGDKVGVGCMVGSCRSCDSCAIDLENYCPKVIMTYANKYHDGTITYGGYSDIMVADE-HFVVRIPEGTP--LDAT  161 (361)
Q Consensus        85 v~~~~~GdrV~~~~~~~~c~~c~~c~~~~~~~c~~~~~~~~~~~~~~~~~~g~~a~~v~v~~-~~~~~ip~~~~--~~~a  161 (361)
                        +|++||||+.                                      .++|++|+.++. +.++++|++++  +.++
T Consensus        83 --~~~~Gd~V~~--------------------------------------~~~~~~~~~v~~~~~~~~lP~~~~~~~~~~  122 (329)
T cd05288          83 --DFKVGDLVSG--------------------------------------FLGWQEYAVVDGASGLRKLDPSLGLPLSAY  122 (329)
T ss_pred             --CCCCCCEEec--------------------------------------ccceEEEEEecchhhcEECCcccCCCHHHH
Confidence              7999999962                                      247999999999 99999999985  4455


Q ss_pred             cc-cchhhhhhhhHhhhcCCCCCCCEEEEEcC-ChHHHHHHHHHHHcCCeEEEEeCCchhHHHHHHHcCCCEEecCCCHH
Q 018067          162 AP-LLCAGITVYSPLRFYGLDKPGMHVGVVGL-GGLGHVAVKFAKAMGVKVTVISTSPSKKSEAIERLGADSFLVSRDQD  239 (361)
Q Consensus       162 a~-l~~~~~ta~~~l~~~~~~~~g~~vlV~Ga-g~vG~~a~~la~~~g~~vi~~~~~~~~~~~~~~~~g~~~vv~~~~~~  239 (361)
                      +. +++.+.+||+++.....+.++++|||+|+ |.+|++++++|+..|++|+++++++++...+.+.+|++.++++++.+
T Consensus       123 ~~~l~~~~~ta~~~l~~~~~~~~~~~vlI~g~~g~ig~~~~~~a~~~G~~vi~~~~~~~~~~~~~~~~g~~~~~~~~~~~  202 (329)
T cd05288         123 LGVLGMTGLTAYFGLTEIGKPKPGETVVVSAAAGAVGSVVGQIAKLLGARVVGIAGSDEKCRWLVEELGFDAAINYKTPD  202 (329)
T ss_pred             HHhcccHHHHHHHHHHhccCCCCCCEEEEecCcchHHHHHHHHHHHcCCEEEEEeCCHHHHHHHHhhcCCceEEecCChh
Confidence            55 88999999999988888899999999996 99999999999999999999988887776664339998888887654


Q ss_pred             HH---HHhc-CCccEEEEcCCCcccHHHHHhccccCCEEEEecCCCCCcc------cChHHHHhCCcEEEecccCCH---
Q 018067          240 EM---QAAM-GTMDGIIDTVSAVHPLMPLIGLLKSQGKLVLVGAPEKPLE------LPAFSLLMGRKIVGGSMIGGM---  306 (361)
Q Consensus       240 ~~---~~~~-~g~d~vid~~g~~~~~~~~~~~l~~~G~~v~~g~~~~~~~------~~~~~~~~~~~~i~g~~~~~~---  306 (361)
                      ..   .... +++|++||++|+.. +..++++++++|+++.+|.......      ++....+.++.++.+......   
T Consensus       203 ~~~~v~~~~~~~~d~vi~~~g~~~-~~~~~~~l~~~G~~v~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  281 (329)
T cd05288         203 LAEALKEAAPDGIDVYFDNVGGEI-LDAALTLLNKGGRIALCGAISQYNATEPPGPKNLGNIITKRLTMQGFIVSDYADR  281 (329)
T ss_pred             HHHHHHHhccCCceEEEEcchHHH-HHHHHHhcCCCceEEEEeeccCcccccccccccHHHHhhCcceEEeecchhhHHH
Confidence            33   2333 47999999999865 8999999999999999986543211      234445678888888765443   


Q ss_pred             --HHHHHHHHHHHcCCCceeE-EEEecccHHHHHHHHHcCCCceEEEE
Q 018067          307 --KETQEMIDFAAKHNIRADI-EVIPADYVNTALERLAKADVRYRFVI  351 (361)
Q Consensus       307 --~~~~~~~~ll~~~~~~~~~-~~~~l~~~~~a~~~~~~~~~~gkvvi  351 (361)
                        +.+.++++++.++.+++.. ..+++++++++++.+.+++..||+++
T Consensus       282 ~~~~~~~~~~~~~~g~i~~~~~~~~~l~~~~~a~~~~~~~~~~gkvvv  329 (329)
T cd05288         282 FPEALAELAKWLAEGKLKYREDVVEGLENAPEAFLGLFTGKNTGKLVV  329 (329)
T ss_pred             HHHHHHHHHHHHHCCCccccccccccHHHHHHHHHHHhcCCCccceeC
Confidence              4578888999999988654 67999999999999998887788874

Prostaglandins and related eicosanoids are metabolized by the oxidation of the 15(S)-hydroxyl group of the NAD+-dependent (type I 15-PGDH) 15-prostaglandin dehydrogenase (15-PGDH) followed by reduction by NADPH/NADH-dependent (type II 15-PGDH) delta-13 15-prostaglandin reductase (13-PGR) to 15-keto-13,14,-dihydroprostaglandins. 13-PGR is a bifunctional enzyme, since it also has leukotriene B(4) 12-hydroxydehydrogenase activity. These 15-PGDH and related enzymes are members of the medium chain dehydrogenase/reductase family. The medium chain dehydrogenases/reductase (MDR)/zinc-dependent alcohol dehydrogenase-like family, which contains the zinc-dependent alcohol dehydrogenase (ADH-Zn) and related proteins, is a diverse group of proteins related to the first identified member, class I mammalian ADH. MDRs display a broad range of activities and are distinguished from the smaller short chain dehydrogenases (~ 250 amino acids vs. the ~ 350 amino

>cd08273 MDR8 Medium chain dehydrogenases/reductase (MDR)/zinc-dependent alcohol dehydrogenase-like family

Probab=100.00  E-value=8.3e-34  Score=263.37  Aligned_cols=301  Identities=25%  Similarity=0.332  Sum_probs=241.8

Q ss_pred             ceeeeeecCCCCCccceeeccCCCCCCeEEEEEeeeccCcchHHhHhcCCCC-CCCCCcccccccEEEEEeCCCCCCCCC
Q 018067           12 NAFGWAAKDTSGVLSPFHFSRRATGEKDVTFKVTHCGICHSDLHMIKNEWGN-TIYPIVPGHEIVGVVTEVGSKVSKFKV   90 (361)
Q Consensus        12 ~~~~~~~~~~~~~l~~~~~~~p~~~~~evlV~v~~~~i~~~D~~~~~g~~~~-~~~p~~lG~e~~G~Vv~vG~~v~~~~~   90 (361)
                      +++.+...+.+.++++++.+.|.+.+++++|++.++++|++|+..+.|..+. ..+|.++|||++|+|+++|+++..|++
T Consensus         2 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~i~v~~~~i~~~d~~~~~g~~~~~~~~~~~~g~e~~G~v~~vG~~v~~~~~   81 (331)
T cd08273           2 REVVVTRRGGPEVLKVVEADLPEPAAGEVVVKVEASGVSFADVQMRRGLYPDQPPLPFTPGYDLVGRVDALGSGVTGFEV   81 (331)
T ss_pred             eeEEEccCCCcccEEEeccCCCCCCCCeEEEEEEEEecCHHHHHHhCCCCCCCCCCCcccccceEEEEEEeCCCCccCCC
Confidence            5667766667788999999999999999999999999999999988876542 246779999999999999999999999


Q ss_pred             CCEEEeccccCCCCCCcccccCCCCCCcchhcccccccCCCCcCCCcceeEEeecCCceEECCCCCCcccccccchhhhh
Q 018067           91 GDKVGVGCMVGSCRSCDSCAIDLENYCPKVIMTYANKYHDGTITYGGYSDIMVADEHFVVRIPEGTPLDATAPLLCAGIT  170 (361)
Q Consensus        91 GdrV~~~~~~~~c~~c~~c~~~~~~~c~~~~~~~~~~~~~~~~~~g~~a~~v~v~~~~~~~ip~~~~~~~aa~l~~~~~t  170 (361)
                      ||+|+..                                   ...|+|++|+.++.+.++++|+++++.+++.+++.+.+
T Consensus        82 Gd~V~~~-----------------------------------~~~g~~~~~~~~~~~~~~~~p~~~~~~~a~~~~~~~~t  126 (331)
T cd08273          82 GDRVAAL-----------------------------------TRVGGNAEYINLDAKYLVPVPEGVDAAEAVCLVLNYVT  126 (331)
T ss_pred             CCEEEEe-----------------------------------CCCcceeeEEEechHHeEECCCCCCHHHHHhhhhHHHH
Confidence            9999742                                   12488999999999999999999999999999999999


Q ss_pred             hhhHhhhcCCCCCCCEEEEEcC-ChHHHHHHHHHHHcCCeEEEEeCCchhHHHHHHHcCCCEEecCCCHHHHH-Hh-cCC
Q 018067          171 VYSPLRFYGLDKPGMHVGVVGL-GGLGHVAVKFAKAMGVKVTVISTSPSKKSEAIERLGADSFLVSRDQDEMQ-AA-MGT  247 (361)
Q Consensus       171 a~~~l~~~~~~~~g~~vlV~Ga-g~vG~~a~~la~~~g~~vi~~~~~~~~~~~~~~~~g~~~vv~~~~~~~~~-~~-~~g  247 (361)
                      ||+++.+...+++|++|+|+|+ |.+|++++++|+.+|++|+.+++ +++. .+++++|++. ++....+... .. .++
T Consensus       127 a~~~l~~~~~~~~g~~vlI~g~~g~ig~~~~~~a~~~g~~v~~~~~-~~~~-~~~~~~g~~~-~~~~~~~~~~~~~~~~~  203 (331)
T cd08273         127 AYQMLHRAAKVLTGQRVLIHGASGGVGQALLELALLAGAEVYGTAS-ERNH-AALRELGATP-IDYRTKDWLPAMLTPGG  203 (331)
T ss_pred             HHHHHHHhcCCCCCCEEEEECCCcHHHHHHHHHHHHcCCEEEEEeC-HHHH-HHHHHcCCeE-EcCCCcchhhhhccCCC
Confidence            9999988777899999999997 99999999999999999999887 5554 4447889754 3444332222 12 247


Q ss_pred             ccEEEEcCCCcccHHHHHhccccCCEEEEecCCCCCcc----cCh------------HHHHhCCcEEEecccC-------
Q 018067          248 MDGIIDTVSAVHPLMPLIGLLKSQGKLVLVGAPEKPLE----LPA------------FSLLMGRKIVGGSMIG-------  304 (361)
Q Consensus       248 ~d~vid~~g~~~~~~~~~~~l~~~G~~v~~g~~~~~~~----~~~------------~~~~~~~~~i~g~~~~-------  304 (361)
                      +|+++|++|+.. +..++++++++|+++.+|.......    ++.            .....+..++.+....       
T Consensus       204 ~d~vl~~~~~~~-~~~~~~~l~~~g~~v~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~p~~  282 (331)
T cd08273         204 VDVVFDGVGGES-YEESYAALAPGGTLVCYGGNSSLLQGRRSLAALGSLLARLAKLKLLPTGRRATFYYVWRDRAEDPKL  282 (331)
T ss_pred             ceEEEECCchHH-HHHHHHHhcCCCEEEEEccCCCCCCccccccchhhhhhhhhhhcceeccceeEEEeechhcccCHHH
Confidence            999999999988 8999999999999999987543221    111            0112233343333221       


Q ss_pred             CHHHHHHHHHHHHcCCCceeE-EEEecccHHHHHHHHHcCCCceEEEE
Q 018067          305 GMKETQEMIDFAAKHNIRADI-EVIPADYVNTALERLAKADVRYRFVI  351 (361)
Q Consensus       305 ~~~~~~~~~~ll~~~~~~~~~-~~~~l~~~~~a~~~~~~~~~~gkvvi  351 (361)
                      ..+.++++++++.++.+++.+ +.+++++++++++.+.+++..||+|+
T Consensus       283 ~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~a~~~~~~~~~~gkvv~  330 (331)
T cd08273         283 FRQDLTELLDLLAKGKIRPKIAKRLPLSEVAEAHRLLESGKVVGKIVL  330 (331)
T ss_pred             HHHHHHHHHHHHHCCCccCCcceEEcHHHHHHHHHHHHcCCCcceEEe
Confidence            125688899999999988655 89999999999999998888899885

This group is a member of the medium chain dehydrogenases/reductase (MDR)/zinc-dependent alcohol dehydrogenase-like family, but lacks the zinc-binding sites of the zinc-dependent alcohol dehydrogenases. The medium chain dehydrogenases/reductase (MDR)/zinc-dependent alcohol dehydrogenase-like family, which contains the zinc-dependent alcohol dehydrogenase (ADH-Zn) and related proteins, is a diverse group of proteins related to the first identified member, class I mammalian ADH. MDRs display a broad range of activities and are distinguished from the smaller short chain dehydrogenases (~ 250 amino acids vs. the ~ 350 amino acids of the MDR). The MDR proteins have 2 domains: a C-terminal NAD(P)-binding Rossmann fold domain of a beta-alpha form and an N-terminal catalytic domain with distant homology to GroES. The MDR group contains a host of activities, including the founding alcoh

>cd05188 MDR Medium chain reductase/dehydrogenase (MDR)/zinc-dependent alcohol dehydrogenase-like family

Probab=100.00  E-value=7.8e-34  Score=255.56  Aligned_cols=265  Identities=33%  Similarity=0.512  Sum_probs=223.0

Q ss_pred             eEEEEEeeeccCcchHHhHhcCCC-CCCCCCcccccccEEEEEeCCCCCCCCCCCEEEeccccCCCCCCcccccCCCCCC
Q 018067           39 DVTFKVTHCGICHSDLHMIKNEWG-NTIYPIVPGHEIVGVVTEVGSKVSKFKVGDKVGVGCMVGSCRSCDSCAIDLENYC  117 (361)
Q Consensus        39 evlV~v~~~~i~~~D~~~~~g~~~-~~~~p~~lG~e~~G~Vv~vG~~v~~~~~GdrV~~~~~~~~c~~c~~c~~~~~~~c  117 (361)
                      ||+|+|.++++|+.|++.+.|..+ ...+|.++|||++|+|+++|+.++.|++||+|+..+.. .|++|.+|..    .|
T Consensus         1 ~v~i~v~~~~i~~~d~~~~~g~~~~~~~~~~~~G~e~~G~v~~~G~~v~~~~~Gd~V~~~~~~-~~~~~~~~~~----~~   75 (271)
T cd05188           1 EVLVRVEAAGLCGTDLHIRRGGYPPPPKLPLILGHEGAGVVVEVGPGVTGVKVGDRVVVLPNL-GCGTCELCRE----LC   75 (271)
T ss_pred             CeEEEEEEEEecchhHHHHcCCCCcCCCCCcccccccEEEEEEECCCCCcCCCCCEEEEcCCC-CCCCCHHHHh----hC
Confidence            689999999999999999888664 34567899999999999999999999999999876665 9999999997    67


Q ss_pred             cchhcccccccCCCCcCCCcceeEEeecCCceEECCCCCCcccccccchhhhhhhhHhhhcCCCCCCCEEEEEcCChHHH
Q 018067          118 PKVIMTYANKYHDGTITYGGYSDIMVADEHFVVRIPEGTPLDATAPLLCAGITVYSPLRFYGLDKPGMHVGVVGLGGLGH  197 (361)
Q Consensus       118 ~~~~~~~~~~~~~~~~~~g~~a~~v~v~~~~~~~ip~~~~~~~aa~l~~~~~ta~~~l~~~~~~~~g~~vlV~Gag~vG~  197 (361)
                      .+....       +....|+|++|+.++.+.++++|+++++++++.+++.+.+||+++.....++++++|||+|+|.+|+
T Consensus        76 ~~~~~~-------~~~~~g~~~~~~~v~~~~~~~ip~~~~~~~a~~~~~~~~~a~~~l~~~~~~~~~~~vli~g~~~~G~  148 (271)
T cd05188          76 PGGGIL-------GEGLDGGFAEYVVVPADNLVPLPDGLSLEEAALLPEPLATAYHALRRAGVLKPGDTVLVLGAGGVGL  148 (271)
T ss_pred             CCCCEe-------ccccCCcceEEEEechHHeEECCCCCCHHHhhHhcCHHHHHHHHHHhccCCCCCCEEEEECCCHHHH
Confidence            655332       4456899999999999999999999999999999999999999999888779999999999866999


Q ss_pred             HHHHHHHHcCCeEEEEeCCchhHHHHHHHcCCCEEecCCCHHHHHHh----cCCccEEEEcCCCcccHHHHHhccccCCE
Q 018067          198 VAVKFAKAMGVKVTVISTSPSKKSEAIERLGADSFLVSRDQDEMQAA----MGTMDGIIDTVSAVHPLMPLIGLLKSQGK  273 (361)
Q Consensus       198 ~a~~la~~~g~~vi~~~~~~~~~~~~~~~~g~~~vv~~~~~~~~~~~----~~g~d~vid~~g~~~~~~~~~~~l~~~G~  273 (361)
                      +++++++..|.+|+++++++++...+ +++|++.+++..+.+....+    ..++|++||+++.......++++++++|+
T Consensus       149 ~~~~~a~~~g~~v~~~~~~~~~~~~~-~~~g~~~~~~~~~~~~~~~~~~~~~~~~d~vi~~~~~~~~~~~~~~~l~~~G~  227 (271)
T cd05188         149 LAAQLAKAAGARVIVTDRSDEKLELA-KELGADHVIDYKEEDLEEELRLTGGGGADVVIDAVGGPETLAQALRLLRPGGR  227 (271)
T ss_pred             HHHHHHHHcCCeEEEEcCCHHHHHHH-HHhCCceeccCCcCCHHHHHHHhcCCCCCEEEECCCCHHHHHHHHHhcccCCE
Confidence            99999999999999998887776555 78888888877664433322    24799999999984448899999999999


Q ss_pred             EEEecCCCCCccc-ChHHHHhCCcEEEecccCCHHHHHHHHHHH
Q 018067          274 LVLVGAPEKPLEL-PAFSLLMGRKIVGGSMIGGMKETQEMIDFA  316 (361)
Q Consensus       274 ~v~~g~~~~~~~~-~~~~~~~~~~~i~g~~~~~~~~~~~~~~ll  316 (361)
                      ++.+|........ .....+.+++++.++..+...+++++++++
T Consensus       228 ~v~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  271 (271)
T cd05188         228 IVVVGGTSGGPPLDDLRRLLFKELTIIGSTGGTREDFEEALDLL  271 (271)
T ss_pred             EEEEccCCCCCCcccHHHHHhcceEEEEeecCCHHHHHHHHhhC
Confidence            9999976543322 245567899999999998888888888763

The medium chain reductase/dehydrogenases (MDR)/zinc-dependent alcohol dehydrogenase-like family, which contains the zinc-dependent alcohol dehydrogenase (ADH-Zn) and related proteins, is a diverse group of proteins related to the first identified member, class I mammalian ADH. MDRs display a broad range of activities and are distinguished from the smaller short chain dehydrogenases (~ 250 amino acids vs. the ~ 350 amino acids of the MDR). The MDR proteins have 2 domains: a C-terminal NAD(P) binding-Rossmann fold domain of a beta-alpha form and an N-terminal catalytic domain with distant homology to GroES. The MDR group contains a host of activities, including the founding alcohol dehydrogenase (ADH) , quinone reductase, sorbitol dehydrogenase, formaldehyde dehydrogenase, butanediol DH, ketose reductase, cinnamyl reductase, and numerous others. The zinc-dependent alcohol dehydro

>cd05286 QOR2 Quinone oxidoreductase (QOR)

Probab=100.00  E-value=3.2e-33  Score=257.23  Aligned_cols=302  Identities=25%  Similarity=0.308  Sum_probs=245.1

Q ss_pred             eeeeecCCCCCccceeeccCCCCCCeEEEEEeeeccCcchHHhHhcCCCCCCCCCcccccccEEEEEeCCCCCCCCCCCE
Q 018067           14 FGWAAKDTSGVLSPFHFSRRATGEKDVTFKVTHCGICHSDLHMIKNEWGNTIYPIVPGHEIVGVVTEVGSKVSKFKVGDK   93 (361)
Q Consensus        14 ~~~~~~~~~~~l~~~~~~~p~~~~~evlV~v~~~~i~~~D~~~~~g~~~~~~~p~~lG~e~~G~Vv~vG~~v~~~~~Gdr   93 (361)
                      +.+...+.+..+.+.+.+.|.+.+++++|+|.++++|+.|++...+..+. .+|.++|||++|+|+.+|+++.+|++||+
T Consensus         3 ~~~~~~~~~~~~~~~~~~~~~~~~~~v~i~v~~~~i~~~d~~~~~~~~~~-~~~~~~g~e~~G~v~~~g~~~~~~~~G~~   81 (320)
T cd05286           3 VRIHKTGGPEVLEYEDVPVPEPGPGEVLVRNTAIGVNFIDTYFRSGLYPL-PLPFVLGVEGAGVVEAVGPGVTGFKVGDR   81 (320)
T ss_pred             EEEecCCCccceEEeecCCCCCCCCEEEEEEEEeecCHHHHHHhcCCCCC-CCCccCCcceeEEEEEECCCCCCCCCCCE
Confidence            33333344455666677777889999999999999999999988776543 55778999999999999999999999999


Q ss_pred             EEeccccCCCCCCcccccCCCCCCcchhcccccccCCCCcCCCcceeEEeecCCceEECCCCCCcccccccchhhhhhhh
Q 018067           94 VGVGCMVGSCRSCDSCAIDLENYCPKVIMTYANKYHDGTITYGGYSDIMVADEHFVVRIPEGTPLDATAPLLCAGITVYS  173 (361)
Q Consensus        94 V~~~~~~~~c~~c~~c~~~~~~~c~~~~~~~~~~~~~~~~~~g~~a~~v~v~~~~~~~ip~~~~~~~aa~l~~~~~ta~~  173 (361)
                      |+..                                   ...|+|++|+.++.+.++++|+++++.+++.+++...++|+
T Consensus        82 V~~~-----------------------------------~~~g~~~~~~~~~~~~~~~~p~~~~~~~~~~~~~~~~~a~~  126 (320)
T cd05286          82 VAYA-----------------------------------GPPGAYAEYRVVPASRLVKLPDGISDETAAALLLQGLTAHY  126 (320)
T ss_pred             EEEe-----------------------------------cCCCceeEEEEecHHHceeCCCCCCHHHHhhccchHHHHHH
Confidence            9741                                   12688999999999999999999999999999999999999


Q ss_pred             HhhhcCCCCCCCEEEEEcC-ChHHHHHHHHHHHcCCeEEEEeCCchhHHHHHHHcCCCEEecCCCHHH---HHHhc--CC
Q 018067          174 PLRFYGLDKPGMHVGVVGL-GGLGHVAVKFAKAMGVKVTVISTSPSKKSEAIERLGADSFLVSRDQDE---MQAAM--GT  247 (361)
Q Consensus       174 ~l~~~~~~~~g~~vlV~Ga-g~vG~~a~~la~~~g~~vi~~~~~~~~~~~~~~~~g~~~vv~~~~~~~---~~~~~--~g  247 (361)
                      ++.....+.+|++|+|+|+ |.+|++++++++.+|++|++++++++++..+ +++|++.+++..+.+.   +....  .+
T Consensus       127 ~l~~~~~~~~g~~vlI~g~~g~~g~~~~~~a~~~g~~v~~~~~~~~~~~~~-~~~g~~~~~~~~~~~~~~~~~~~~~~~~  205 (320)
T cd05286         127 LLRETYPVKPGDTVLVHAAAGGVGLLLTQWAKALGATVIGTVSSEEKAELA-RAAGADHVINYRDEDFVERVREITGGRG  205 (320)
T ss_pred             HHHHhcCCCCCCEEEEEcCCchHHHHHHHHHHHcCCEEEEEcCCHHHHHHH-HHCCCCEEEeCCchhHHHHHHHHcCCCC
Confidence            9988788899999999996 9999999999999999999999888877666 7899988887765433   33333  27


Q ss_pred             ccEEEEcCCCcccHHHHHhccccCCEEEEecCCCCC-cccChHHHHhCCcEEEeccc----CCH----HHHHHHHHHHHc
Q 018067          248 MDGIIDTVSAVHPLMPLIGLLKSQGKLVLVGAPEKP-LELPAFSLLMGRKIVGGSMI----GGM----KETQEMIDFAAK  318 (361)
Q Consensus       248 ~d~vid~~g~~~~~~~~~~~l~~~G~~v~~g~~~~~-~~~~~~~~~~~~~~i~g~~~----~~~----~~~~~~~~ll~~  318 (361)
                      +|++||++++.. ...++++++++|+++.+|..... ..++...+..+++++.+...    ...    +.+.++++++.+
T Consensus       206 ~d~vl~~~~~~~-~~~~~~~l~~~g~~v~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  284 (320)
T cd05286         206 VDVVYDGVGKDT-FEGSLDSLRPRGTLVSFGNASGPVPPFDLLRLSKGSLFLTRPSLFHYIATREELLARAAELFDAVAS  284 (320)
T ss_pred             eeEEEECCCcHh-HHHHHHhhccCcEEEEEecCCCCCCccCHHHHHhcCcEEEEEehhhhcCCHHHHHHHHHHHHHHHHC
Confidence            999999999865 88999999999999999875432 23444444467888764322    111    235567888999


Q ss_pred             CCCceeE-EEEecccHHHHHHHHHcCCCceEEEEEe
Q 018067          319 HNIRADI-EVIPADYVNTALERLAKADVRYRFVIDV  353 (361)
Q Consensus       319 ~~~~~~~-~~~~l~~~~~a~~~~~~~~~~gkvvi~~  353 (361)
                      +.+.+.. +.|++++++++++.+.+++..+|+++++
T Consensus       285 ~~l~~~~~~~~~~~~~~~a~~~~~~~~~~~~vv~~~  320 (320)
T cd05286         285 GKLKVEIGKRYPLADAAQAHRDLESRKTTGKLLLIP  320 (320)
T ss_pred             CCCcCcccceEcHHHHHHHHHHHHcCCCCceEEEeC
Confidence            9887655 8999999999999999988889999864

Quinone oxidoreductase (QOR) and 2-haloacrylate reductase. QOR catalyzes the conversion of a quinone + NAD(P)H to a hydroquinone + NAD(P)+. Quinones are cyclic diones derived from aromatic compounds. Membrane bound QOR actin the respiratory chains of bacteria and mitochondria, while soluble QOR acts to protect from toxic quinones (e.g. DT-diaphorase) or as a soluble eye-lens protein in some vertebrates (e.g. zeta-crystalin). QOR reduces quinones through a semi-quinone intermediate via a NAD(P)H-dependent single electron transfer. QOR is a member of the medium chain dehydrogenase/reductase family, but lacks the zinc-binding sites of the prototypical alcohol dehydrogenases of this group. 2-haloacrylate reductase, a member of this subgroup, catalyzes the NADPH-dependent reduction of a carbon-carbon double bond in organohalogen compounds. Although similar to QOR, Burkholderia 2-haloacrylate reductase does not act on the quinones 1,4-benzoquinone

>cd08272 MDR6 Medium chain dehydrogenases/reductase (MDR)/zinc-dependent alcohol dehydrogenase-like family

Probab=100.00  E-value=2.8e-33  Score=258.74  Aligned_cols=307  Identities=24%  Similarity=0.302  Sum_probs=248.3

Q ss_pred             cceeeeeecCCCCCccceeeccCCCCCCeEEEEEeeeccCcchHHhHhcCCC-CCCCCCcccccccEEEEEeCCCCCCCC
Q 018067           11 KNAFGWAAKDTSGVLSPFHFSRRATGEKDVTFKVTHCGICHSDLHMIKNEWG-NTIYPIVPGHEIVGVVTEVGSKVSKFK   89 (361)
Q Consensus        11 ~~~~~~~~~~~~~~l~~~~~~~p~~~~~evlV~v~~~~i~~~D~~~~~g~~~-~~~~p~~lG~e~~G~Vv~vG~~v~~~~   89 (361)
                      |+++++...+.++.+++++.+.|.+.+++|+|++.++++|++|+....+... ....|.++|||++|+|+++|+++..|+
T Consensus         1 ~~a~~~~~~~~~~~~~~~~~~~~~~~~~~v~v~v~~~~i~~~d~~~~~~~~~~~~~~~~~~g~e~~G~v~~~G~~~~~~~   80 (326)
T cd08272           1 MKALVLESFGGPEVFELREVPRPQPGPGQVLVRVHASGVNPLDTKIRRGGAAARPPLPAILGCDVAGVVEAVGEGVTRFR   80 (326)
T ss_pred             CeEEEEccCCCchheEEeecCCCCCCCCeEEEEEEEEecCHHHHHHhCCCCCCCCCCCcccccceeEEEEEeCCCCCCCC
Confidence            5677776656666788888888889999999999999999999998877543 123477899999999999999999999


Q ss_pred             CCCEEEeccccCCCCCCcccccCCCCCCcchhcccccccCCCCcCCCcceeEEeecCCceEECCCCCCcccccccchhhh
Q 018067           90 VGDKVGVGCMVGSCRSCDSCAIDLENYCPKVIMTYANKYHDGTITYGGYSDIMVADEHFVVRIPEGTPLDATAPLLCAGI  169 (361)
Q Consensus        90 ~GdrV~~~~~~~~c~~c~~c~~~~~~~c~~~~~~~~~~~~~~~~~~g~~a~~v~v~~~~~~~ip~~~~~~~aa~l~~~~~  169 (361)
                      +||+|+.....                              -....|+|++|+.++.+.++++|+++++.+++.++..+.
T Consensus        81 ~Gd~V~~~~~~------------------------------~~~~~g~~~~~~~v~~~~~~~~p~~~~~~~~~~~~~~~~  130 (326)
T cd08272          81 VGDEVYGCAGG------------------------------LGGLQGSLAEYAVVDARLLALKPANLSMREAAALPLVGI  130 (326)
T ss_pred             CCCEEEEccCC------------------------------cCCCCCceeEEEEecHHHcccCCCCCCHHHHHHhHHHHH
Confidence            99999742100                              002468899999999999999999999999999999999


Q ss_pred             hhhhHhhhcCCCCCCCEEEEEcC-ChHHHHHHHHHHHcCCeEEEEeCCchhHHHHHHHcCCCEEecCCCH--HHHHHhcC
Q 018067          170 TVYSPLRFYGLDKPGMHVGVVGL-GGLGHVAVKFAKAMGVKVTVISTSPSKKSEAIERLGADSFLVSRDQ--DEMQAAMG  246 (361)
Q Consensus       170 ta~~~l~~~~~~~~g~~vlV~Ga-g~vG~~a~~la~~~g~~vi~~~~~~~~~~~~~~~~g~~~vv~~~~~--~~~~~~~~  246 (361)
                      +||+++.+...+++|++++|+|+ |.+|++++++++.+|++|+.++++ ++...+ +++|++.+++....  +.+.....
T Consensus       131 ~a~~~l~~~~~~~~~~~vli~g~~~~~g~~~~~~a~~~g~~v~~~~~~-~~~~~~-~~~g~~~~~~~~~~~~~~~~~~~~  208 (326)
T cd08272         131 TAWEGLVDRAAVQAGQTVLIHGGAGGVGHVAVQLAKAAGARVYATASS-EKAAFA-RSLGADPIIYYRETVVEYVAEHTG  208 (326)
T ss_pred             HHHHHHHHhcCCCCCCEEEEEcCCCcHHHHHHHHHHHcCCEEEEEech-HHHHHH-HHcCCCEEEecchhHHHHHHHhcC
Confidence            99999887888899999999996 999999999999999999999887 666555 78999887776653  22333333


Q ss_pred             --CccEEEEcCCCcccHHHHHhccccCCEEEEecCCCCCcccChHHHHhCCcEEEecccCC-----------HHHHHHHH
Q 018067          247 --TMDGIIDTVSAVHPLMPLIGLLKSQGKLVLVGAPEKPLELPAFSLLMGRKIVGGSMIGG-----------MKETQEMI  313 (361)
Q Consensus       247 --g~d~vid~~g~~~~~~~~~~~l~~~G~~v~~g~~~~~~~~~~~~~~~~~~~i~g~~~~~-----------~~~~~~~~  313 (361)
                        ++|.++|++|+.. +..++++++++|+++.+|... .  ........+++++.+.....           .+.+..++
T Consensus       209 ~~~~d~v~~~~~~~~-~~~~~~~l~~~g~~v~~~~~~-~--~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  284 (326)
T cd08272         209 GRGFDVVFDTVGGET-LDASFEAVALYGRVVSILGGA-T--HDLAPLSFRNATYSGVFTLLPLLTGEGRAHHGEILREAA  284 (326)
T ss_pred             CCCCcEEEECCChHH-HHHHHHHhccCCEEEEEecCC-c--cchhhHhhhcceEEEEEcccccccccchhhHHHHHHHHH
Confidence              6999999999876 888999999999999998653 2  22223335777777665322           34678888


Q ss_pred             HHHHcCCCceeE--EEEecccHHHHHHHHHcCCCceEEEEEe
Q 018067          314 DFAAKHNIRADI--EVIPADYVNTALERLAKADVRYRFVIDV  353 (361)
Q Consensus       314 ~ll~~~~~~~~~--~~~~l~~~~~a~~~~~~~~~~gkvvi~~  353 (361)
                      +++.++.+++.+  +.+++++++++++.+.+++..+|+++++
T Consensus       285 ~~l~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~vv~~~  326 (326)
T cd08272         285 RLVERGQLRPLLDPRTFPLEEAAAAHARLESGSARGKIVIDV  326 (326)
T ss_pred             HHHHCCCcccccccceecHHHHHHHHHHHHcCCcccEEEEEC
Confidence            999999887653  8999999999999999888779999864

This group is a member of the medium chain dehydrogenases/reductase (MDR)/zinc-dependent alcohol dehydrogenase-like family, but lacks the zinc-binding sites of the zinc-dependent alcohol dehydrogenases. The medium chain dehydrogenases/reductase (MDR)/zinc-dependent alcohol dehydrogenase-like family, which contains the zinc-dependent alcohol dehydrogenase (ADH-Zn) and related proteins, is a diverse group of proteins related to the first identified member, class I mammalian ADH. MDRs display a broad range of activities and are distinguished from the smaller short chain dehydrogenases (~ 250 amino acids vs. the ~ 350 amino acids of the MDR). The MDR proteins have 2 domains: a C-terminal NAD(P)-binding Rossmann fold domain of a beta-alpha form and an N-terminal catalytic domain with distant homology to GroES. The MDR group contains a host of activities, including the founding alcoh

>cd08247 AST1_like AST1 is a cytoplasmic protein associated with the periplasmic membrane in yeast

Probab=100.00  E-value=4.2e-33  Score=261.01  Aligned_cols=309  Identities=22%  Similarity=0.247  Sum_probs=231.6

Q ss_pred             eeeeeecCCCCCccceeeccCC-CCCCeEEEEEeeeccCcchHHhHhcCCCCC-CCCCcccccccEEEEEeCCCCC-CCC
Q 018067           13 AFGWAAKDTSGVLSPFHFSRRA-TGEKDVTFKVTHCGICHSDLHMIKNEWGNT-IYPIVPGHEIVGVVTEVGSKVS-KFK   89 (361)
Q Consensus        13 ~~~~~~~~~~~~l~~~~~~~p~-~~~~evlV~v~~~~i~~~D~~~~~g~~~~~-~~p~~lG~e~~G~Vv~vG~~v~-~~~   89 (361)
                      ++++...++|..++.+++|.|. +.++||+|++.++++|++|+..+.+..... ..|.++|||++|+|+++|++++ .|+
T Consensus         3 ~~~~~~~~~~~~~~~~~~~~p~~~~~~~v~I~v~~~~~~~~d~~~~~~~~~~~~~~~~~~g~e~~G~V~~vG~~v~~~~~   82 (352)
T cd08247           3 ALTFKNNTSPLTITTIKLPLPNCYKDNEIVVKVHAAALNPVDLKLYNSYTFHFKVKEKGLGRDYSGVIVKVGSNVASEWK   82 (352)
T ss_pred             eEEEecCCCcceeeccCCCCCCCCCCCeEEEEEEEEecChHhHHHhcccccccccCCCccCceeEEEEEEeCcccccCCC
Confidence            4555555556556666666664 499999999999999999998875432211 2377899999999999999998 899


Q ss_pred             CCCEEEeccccCCCCCCcccccCCCCCCcchhcccccccCCCCcCCCcceeEEeecCC----ceEECCCCCCcccccccc
Q 018067           90 VGDKVGVGCMVGSCRSCDSCAIDLENYCPKVIMTYANKYHDGTITYGGYSDIMVADEH----FVVRIPEGTPLDATAPLL  165 (361)
Q Consensus        90 ~GdrV~~~~~~~~c~~c~~c~~~~~~~c~~~~~~~~~~~~~~~~~~g~~a~~v~v~~~----~~~~ip~~~~~~~aa~l~  165 (361)
                      +||+|+.....                              .....|+|++|+.++.+    .++++|+++++++++.++
T Consensus        83 ~Gd~V~~~~~~------------------------------~~~~~g~~~~~~~v~~~~~~~~~~~lP~~l~~~~aa~~~  132 (352)
T cd08247          83 VGDEVCGIYPH------------------------------PYGGQGTLSQYLLVDPKKDKKSITRKPENISLEEAAAWP  132 (352)
T ss_pred             CCCEEEEeecC------------------------------CCCCCceeeEEEEEccccccceeEECCCCCCHHHHHHhH
Confidence            99999753211                              01146899999999987    789999999999999999


Q ss_pred             hhhhhhhhHhhhcC-CCCCCCEEEEEcC-ChHHHHHHHHHHHc-CC-eEEEEeCCchhHHHHHHHcCCCEEecCCCHH--
Q 018067          166 CAGITVYSPLRFYG-LDKPGMHVGVVGL-GGLGHVAVKFAKAM-GV-KVTVISTSPSKKSEAIERLGADSFLVSRDQD--  239 (361)
Q Consensus       166 ~~~~ta~~~l~~~~-~~~~g~~vlV~Ga-g~vG~~a~~la~~~-g~-~vi~~~~~~~~~~~~~~~~g~~~vv~~~~~~--  239 (361)
                      +.+.+||+++.... .+++|++|+|+|+ |.+|++++++|+.. +. .++.+. +++++. .++++|++.+++.++.+  
T Consensus       133 ~~~~ta~~~l~~~~~~~~~g~~vlI~ga~~~vg~~~~~~a~~~~~~~~v~~~~-~~~~~~-~~~~~g~~~~i~~~~~~~~  210 (352)
T cd08247         133 LVLGTAYQILEDLGQKLGPDSKVLVLGGSTSVGRFAIQLAKNHYNIGTVVGTC-SSRSAE-LNKKLGADHFIDYDAHSGV  210 (352)
T ss_pred             HHHHHHHHHHHHhhhccCCCCeEEEECCCchHHHHHHHHHHhcCCcceEEEEe-ChhHHH-HHHHhCCCEEEecCCCccc
Confidence            99999999998887 7899999999998 89999999999987 55 566654 455554 44889998888865533  


Q ss_pred             -H----HHHhc--CCccEEEEcCCCcccHHHHHhccc---cCCEEEEecCCC-CCcc-----------cChH----HHHh
Q 018067          240 -E----MQAAM--GTMDGIIDTVSAVHPLMPLIGLLK---SQGKLVLVGAPE-KPLE-----------LPAF----SLLM  293 (361)
Q Consensus       240 -~----~~~~~--~g~d~vid~~g~~~~~~~~~~~l~---~~G~~v~~g~~~-~~~~-----------~~~~----~~~~  293 (361)
                       .    ++..+  .++|++||++|+......++++++   ++|+++.++... ....           +...    ....
T Consensus       211 ~~~~~~~~~~~~~~~~d~vl~~~g~~~~~~~~~~~l~~~~~~G~~v~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  290 (352)
T cd08247         211 KLLKPVLENVKGQGKFDLILDCVGGYDLFPHINSILKPKSKNGHYVTIVGDYKANYKKDTFNSWDNPSANARKLFGSLGL  290 (352)
T ss_pred             chHHHHHHhhcCCCCceEEEECCCCHHHHHHHHHHhCccCCCCEEEEEeCCCcccccchhhhhccccchhhhhhhhhhcC
Confidence             2    22233  379999999998555888999999   999999875322 1110           0011    1112


Q ss_pred             CCcEEEeccc-CCHHHHHHHHHHHHcCCCceeE-EEEecccHHHHHHHHHcCCCceEEEEEe
Q 018067          294 GRKIVGGSMI-GGMKETQEMIDFAAKHNIRADI-EVIPADYVNTALERLAKADVRYRFVIDV  353 (361)
Q Consensus       294 ~~~~i~g~~~-~~~~~~~~~~~ll~~~~~~~~~-~~~~l~~~~~a~~~~~~~~~~gkvvi~~  353 (361)
                      +...+..... ...+.++++++++.++.+++.. +.++++++++||+.+.+++..||+++++
T Consensus       291 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~l~~~~~a~~~~~~~~~~gkvvi~~  352 (352)
T cd08247         291 WSYNYQFFLLDPNADWIEKCAELIADGKVKPPIDSVYPFEDYKEAFERLKSNRAKGKVVIKV  352 (352)
T ss_pred             CCcceEEEEecCCHHHHHHHHHHHhCCCeEeeeccEecHHHHHHHHHHHHcCCCCCcEEEeC
Confidence            3333322211 1135688899999999988655 8999999999999999988889999863

This group contains members identified in targeting of yeast membrane proteins ATPase. AST1 is a cytoplasmic protein associated with the periplasmic membrane in yeast, identified as a multicopy suppressor of pma1 mutants which cause temperature sensitive growth arrest due to the inability of ATPase to target to the cell surface. This family is homologous to the medium chain family of dehydrogenases and reductases. Medium chain dehydrogenases/reductase (MDR)/zinc-dependent alcohol dehydrogenase-like family, which contains the zinc-dependent alcohol dehydrogenase (ADH-Zn) and related proteins, is a diverse group of proteins related to the first identified member, class I mammalian ADH. MDRs display a broad range of activities and are distinguished from the smaller short chain dehydrogenases (~ 250 amino acids vs. the ~ 350 amino acids of the MDR). The MDR proteins have 2 domains: a C-termi

>cd08271 MDR5 Medium chain dehydrogenases/reductase (MDR)/zinc-dependent alcohol dehydrogenase-like family

Probab=100.00  E-value=6.4e-33  Score=256.40  Aligned_cols=308  Identities=26%  Similarity=0.366  Sum_probs=241.1

Q ss_pred             cceeeeeecCCCCCccceeeccCCCCCCeEEEEEeeeccCcchHHhHhcCCCCCCCCCcccccccEEEEEeCCCCCCCCC
Q 018067           11 KNAFGWAAKDTSGVLSPFHFSRRATGEKDVTFKVTHCGICHSDLHMIKNEWGNTIYPIVPGHEIVGVVTEVGSKVSKFKV   90 (361)
Q Consensus        11 ~~~~~~~~~~~~~~l~~~~~~~p~~~~~evlV~v~~~~i~~~D~~~~~g~~~~~~~p~~lG~e~~G~Vv~vG~~v~~~~~   90 (361)
                      |+++.+..++.-..+++++++.|.+.+++|+||+.++++|++|+..+.+......+|.++|||++|+|+.+|+++..+++
T Consensus         1 ~~a~~~~~~~~~~~~~~~~~~~~~~~~~~v~v~v~~~~i~~~d~~~~~~~~~~~~~~~~~g~e~~G~v~~~G~~~~~~~~   80 (325)
T cd08271           1 MKAWVLPKPGAALQLTLEEIEIPGPGAGEVLVKVHAAGLNPVDWKVIAWGPPAWSYPHVPGVDGAGVVVAVGAKVTGWKV   80 (325)
T ss_pred             CeeEEEccCCCcceeEEeccCCCCCCCCEEEEEEEEEecCHHHHHHhcCCCCCCCCCcccccceEEEEEEeCCCCCcCCC
Confidence            56666643322137888999999999999999999999999999988776543344678999999999999999999999


Q ss_pred             CCEEEeccccCCCCCCcccccCCCCCCcchhcccccccCCCCcCCCcceeEEeecCCceEECCCCCCcccccccchhhhh
Q 018067           91 GDKVGVGCMVGSCRSCDSCAIDLENYCPKVIMTYANKYHDGTITYGGYSDIMVADEHFVVRIPEGTPLDATAPLLCAGIT  170 (361)
Q Consensus        91 GdrV~~~~~~~~c~~c~~c~~~~~~~c~~~~~~~~~~~~~~~~~~g~~a~~v~v~~~~~~~ip~~~~~~~aa~l~~~~~t  170 (361)
                      ||+|+..+.                                ....|+|++|+.++.+.++++|+++++.+++.+.+.+.+
T Consensus        81 Gd~V~~~~~--------------------------------~~~~~~~~s~~~~~~~~~~~ip~~~~~~~~a~~~~~~~~  128 (325)
T cd08271          81 GDRVAYHAS--------------------------------LARGGSFAEYTVVDARAVLPLPDSLSFEEAAALPCAGLT  128 (325)
T ss_pred             CCEEEeccC--------------------------------CCCCccceeEEEeCHHHeEECCCCCCHHHHHhhhhhHHH
Confidence            999975321                                124688999999999999999999999999999999999


Q ss_pred             hhhHhhhcCCCCCCCEEEEEcC-ChHHHHHHHHHHHcCCeEEEEeCCchhHHHHHHHcCCCEEecCCCHHH---HHHhc-
Q 018067          171 VYSPLRFYGLDKPGMHVGVVGL-GGLGHVAVKFAKAMGVKVTVISTSPSKKSEAIERLGADSFLVSRDQDE---MQAAM-  245 (361)
Q Consensus       171 a~~~l~~~~~~~~g~~vlV~Ga-g~vG~~a~~la~~~g~~vi~~~~~~~~~~~~~~~~g~~~vv~~~~~~~---~~~~~-  245 (361)
                      |++++.+...+++|++++|+|+ |.+|++++++++..|++++++. .+++...+ +++|++.+++....+.   +.... 
T Consensus       129 a~~~~~~~~~~~~g~~vlI~g~~~~ig~~~~~~a~~~g~~v~~~~-~~~~~~~~-~~~g~~~~~~~~~~~~~~~~~~~~~  206 (325)
T cd08271         129 AYQALFKKLRIEAGRTILITGGAGGVGSFAVQLAKRAGLRVITTC-SKRNFEYV-KSLGADHVIDYNDEDVCERIKEITG  206 (325)
T ss_pred             HHHHHHHhcCCCCCCEEEEECCccHHHHHHHHHHHHcCCEEEEEE-cHHHHHHH-HHcCCcEEecCCCccHHHHHHHHcC
Confidence            9999988888899999999998 8999999999999999998876 55555444 7899988887765432   33333 


Q ss_pred             -CCccEEEEcCCCcccHHHHHhccccCCEEEEecCCCCCcccCh--HHHHhCCcEEEecccCC--------HHHHHHHHH
Q 018067          246 -GTMDGIIDTVSAVHPLMPLIGLLKSQGKLVLVGAPEKPLELPA--FSLLMGRKIVGGSMIGG--------MKETQEMID  314 (361)
Q Consensus       246 -~g~d~vid~~g~~~~~~~~~~~l~~~G~~v~~g~~~~~~~~~~--~~~~~~~~~i~g~~~~~--------~~~~~~~~~  314 (361)
                       .++|.+++++++.. ...++++++++|+++.++..........  .....+++.+.+.....        .+.+.++++
T Consensus       207 ~~~~d~vi~~~~~~~-~~~~~~~l~~~G~~v~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  285 (325)
T cd08271         207 GRGVDAVLDTVGGET-AAALAPTLAFNGHLVCIQGRPDASPDPPFTRALSVHEVALGAAHDHGDPAAWQDLRYAGEELLE  285 (325)
T ss_pred             CCCCcEEEECCCcHh-HHHHHHhhccCCEEEEEcCCCCCcchhHHhhcceEEEEEecccccccchhhHHHHHHHHHHHHH
Confidence             36999999999877 6779999999999999975432211111  11222334443332211        134577888


Q ss_pred             HHHcCCCceeE-EEEecccHHHHHHHHHcCCCceEEEEEe
Q 018067          315 FAAKHNIRADI-EVIPADYVNTALERLAKADVRYRFVIDV  353 (361)
Q Consensus       315 ll~~~~~~~~~-~~~~l~~~~~a~~~~~~~~~~gkvvi~~  353 (361)
                      ++.++.+++.. +.++++++.++++.+.+++..+|+++++
T Consensus       286 ~~~~~~i~~~~~~~~~~~~~~~a~~~~~~~~~~~kiv~~~  325 (325)
T cd08271         286 LLAAGKLEPLVIEVLPFEQLPEALRALKDRHTRGKIVVTI  325 (325)
T ss_pred             HHHCCCeeeccceEEcHHHHHHHHHHHHcCCccceEEEEC
Confidence            99999887644 8899999999999999888789998863

This group is a member of the medium chain dehydrogenases/reductase (MDR)/zinc-dependent alcohol dehydrogenase-like family, but lacks the zinc-binding sites of the zinc-dependent alcohol dehydrogenases. The medium chain dehydrogenases/reductase (MDR)/zinc-dependent alcohol dehydrogenase-like family, which contains the zinc-dependent alcohol dehydrogenase (ADH-Zn) and related proteins, is a diverse group of proteins related to the first identified member, class I mammalian ADH. MDRs display a broad range of activities and are distinguished from the smaller short chain dehydrogenases (~ 250 amino acids vs. the ~ 350 amino acids of the MDR). The MDR proteins have 2 domains: a C-terminal NAD(P)-binding Rossmann fold domain of a beta-alpha form and an N-terminal catalytic domain with distant homology to GroES. The MDR group contains a host of activities, including the founding alcoh

>TIGR02824 quinone_pig3 putative NAD(P)H quinone oxidoreductase, PIG3 family

Probab=100.00  E-value=1.9e-32  Score=252.87  Aligned_cols=306  Identities=27%  Similarity=0.329  Sum_probs=249.1

Q ss_pred             cceeeeeecCCCCCccceeeccCCCCCCeEEEEEeeeccCcchHHhHhcCCCC-CCCCCcccccccEEEEEeCCCCCCCC
Q 018067           11 KNAFGWAAKDTSGVLSPFHFSRRATGEKDVTFKVTHCGICHSDLHMIKNEWGN-TIYPIVPGHEIVGVVTEVGSKVSKFK   89 (361)
Q Consensus        11 ~~~~~~~~~~~~~~l~~~~~~~p~~~~~evlV~v~~~~i~~~D~~~~~g~~~~-~~~p~~lG~e~~G~Vv~vG~~v~~~~   89 (361)
                      |+++.+...+.+..+++++.+.|.+++++++|++.++++|++|+....+.++. ..+|.++|||++|+|+.+|+.+..|+
T Consensus         1 ~~~~~~~~~~~~~~~~~~~~~~~~l~~~~v~i~v~~~~~~~~d~~~~~~~~~~~~~~~~~~g~e~~G~v~~vg~~~~~~~   80 (325)
T TIGR02824         1 MKAIEITEPGGPEVLVLVEVPLPVPKAGEVLIRVAAAGVNRPDLLQRAGKYPPPPGASDILGLEVAGEVVAVGEGVSRWK   80 (325)
T ss_pred             CceEEEccCCCcccceEEeCCCCCCCCCEEEEEEEEEecCHHHHHHhcCCCCCCCCCCCCccceeEEEEEEeCCCCCCCC
Confidence            45566554445666777777777889999999999999999999988775432 24567999999999999999999999


Q ss_pred             CCCEEEeccccCCCCCCcccccCCCCCCcchhcccccccCCCCcCCCcceeEEeecCCceEECCCCCCcccccccchhhh
Q 018067           90 VGDKVGVGCMVGSCRSCDSCAIDLENYCPKVIMTYANKYHDGTITYGGYSDIMVADEHFVVRIPEGTPLDATAPLLCAGI  169 (361)
Q Consensus        90 ~GdrV~~~~~~~~c~~c~~c~~~~~~~c~~~~~~~~~~~~~~~~~~g~~a~~v~v~~~~~~~ip~~~~~~~aa~l~~~~~  169 (361)
                      +||+|+..                                   ..+|+|++|+.++.+.++++|+++++..++.+++.+.
T Consensus        81 ~Gd~V~~~-----------------------------------~~~~~~~~~~~~~~~~~~~ip~~~~~~~~~~~~~~~~  125 (325)
T TIGR02824        81 VGDRVCAL-----------------------------------VAGGGYAEYVAVPAGQVLPVPEGLSLVEAAALPETFF  125 (325)
T ss_pred             CCCEEEEc-----------------------------------cCCCcceeEEEecHHHcEeCCCCCCHHHHHhhhHHHH
Confidence            99999741                                   2358899999999999999999999999999999999


Q ss_pred             hhhhHhhhcCCCCCCCEEEEEcC-ChHHHHHHHHHHHcCCeEEEEeCCchhHHHHHHHcCCCEEecCCCHHH---HHHhc
Q 018067          170 TVYSPLRFYGLDKPGMHVGVVGL-GGLGHVAVKFAKAMGVKVTVISTSPSKKSEAIERLGADSFLVSRDQDE---MQAAM  245 (361)
Q Consensus       170 ta~~~l~~~~~~~~g~~vlV~Ga-g~vG~~a~~la~~~g~~vi~~~~~~~~~~~~~~~~g~~~vv~~~~~~~---~~~~~  245 (361)
                      ++|+++.....++++++++|+|+ |++|++++++++.+|++|+++++++++...+ +++|++.+++....+.   +....
T Consensus       126 ta~~~~~~~~~~~~~~~vlv~g~~~~~g~~~~~~a~~~g~~v~~~~~~~~~~~~~-~~~g~~~~~~~~~~~~~~~~~~~~  204 (325)
T TIGR02824       126 TVWSNLFQRGGLKAGETVLIHGGASGIGTTAIQLAKAFGARVFTTAGSDEKCAAC-EALGADIAINYREEDFVEVVKAET  204 (325)
T ss_pred             HHHHHHHHhcCCCCCCEEEEEcCcchHHHHHHHHHHHcCCEEEEEeCCHHHHHHH-HHcCCcEEEecCchhHHHHHHHHc
Confidence            99999877888899999999997 9999999999999999999998888776655 7899887777665443   33333


Q ss_pred             --CCccEEEEcCCCcccHHHHHhccccCCEEEEecCCCC-CcccChHHHHhCCcEEEecccCCH----------HHHHHH
Q 018067          246 --GTMDGIIDTVSAVHPLMPLIGLLKSQGKLVLVGAPEK-PLELPAFSLLMGRKIVGGSMIGGM----------KETQEM  312 (361)
Q Consensus       246 --~g~d~vid~~g~~~~~~~~~~~l~~~G~~v~~g~~~~-~~~~~~~~~~~~~~~i~g~~~~~~----------~~~~~~  312 (361)
                        +++|++++++|+.. ...++++++++|+++.+|.... ...++...++.+++++.+......          +.+.++
T Consensus       205 ~~~~~d~~i~~~~~~~-~~~~~~~l~~~g~~v~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  283 (325)
T TIGR02824       205 GGKGVDVILDIVGGSY-LNRNIKALALDGRIVQIGFQGGRKAELDLGPLLAKRLTITGSTLRARPVAEKAAIAAELREHV  283 (325)
T ss_pred             CCCCeEEEEECCchHH-HHHHHHhhccCcEEEEEecCCCCcCCCChHHHHhcCCEEEEEehhhcchhhhHHHHHHHHHHH
Confidence              26999999999865 8899999999999999987542 224555555578999988764331          224567


Q ss_pred             HHHHHcCCCceeE-EEEecccHHHHHHHHHcCCCceEEEEEe
Q 018067          313 IDFAAKHNIRADI-EVIPADYVNTALERLAKADVRYRFVIDV  353 (361)
Q Consensus       313 ~~ll~~~~~~~~~-~~~~l~~~~~a~~~~~~~~~~gkvvi~~  353 (361)
                      ++++.++.+++.. +.+++++++++++.+.+++..+|+++++
T Consensus       284 ~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~  325 (325)
T TIGR02824       284 WPLLASGRVRPVIDKVFPLEDAAQAHALMESGDHIGKIVLTV  325 (325)
T ss_pred             HHHHHCCcccCccccEEeHHHHHHHHHHHHhCCCcceEEEeC
Confidence            7888888887544 8899999999999999888789998763

Members of this family are putative quinone oxidoreductases that belong to the broader superfamily (modeled by Pfam pfam00107) of zinc-dependent alcohol (of medium chain length) dehydrogenases and quinone oxiooreductases. The alignment shows no motif of conserved Cys residues as are found in zinc-binding members of the superfamily, and members are likely to be quinone oxidoreductases instead. A member of this family in Homo sapiens, PIG3, is induced by p53 but is otherwise uncharacterized.

>cd05289 MDR_like_2 alcohol dehydrogenase and quinone reductase-like medium chain degydrogenases/reductases

Probab=100.00  E-value=9.8e-33  Score=253.01  Aligned_cols=302  Identities=27%  Similarity=0.374  Sum_probs=242.6

Q ss_pred             cceeeeeecCCCCCccceeeccCCCCCCeEEEEEeeeccCcchHHhHhcCCC---CCCCCCcccccccEEEEEeCCCCCC
Q 018067           11 KNAFGWAAKDTSGVLSPFHFSRRATGEKDVTFKVTHCGICHSDLHMIKNEWG---NTIYPIVPGHEIVGVVTEVGSKVSK   87 (361)
Q Consensus        11 ~~~~~~~~~~~~~~l~~~~~~~p~~~~~evlV~v~~~~i~~~D~~~~~g~~~---~~~~p~~lG~e~~G~Vv~vG~~v~~   87 (361)
                      |+++.+...+.+..+++++.+.|.+++++|+|++.++++|++|+..+.|...   ...+|..+|||++|+|+++|++++.
T Consensus         1 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~v~v~~~~i~~~d~~~~~g~~~~~~~~~~~~~~g~e~~G~v~~~G~~~~~   80 (309)
T cd05289           1 MKAVRIHEYGGPEVLELADVPTPEPGPGEVLVKVHAAGVNPVDLKIREGLLKAAFPLTLPLIPGHDVAGVVVAVGPGVTG   80 (309)
T ss_pred             CceEEEcccCCccceeecccCCCCCCCCeEEEEEEEeeCCHHHHHHhcCCccccCCCCCCCccccceeEEEEeeCCCCCC
Confidence            5666665544455566777788889999999999999999999998877542   2355789999999999999999999


Q ss_pred             CCCCCEEEeccccCCCCCCcccccCCCCCCcchhcccccccCCCCcCCCcceeEEeecCCceEECCCCCCcccccccchh
Q 018067           88 FKVGDKVGVGCMVGSCRSCDSCAIDLENYCPKVIMTYANKYHDGTITYGGYSDIMVADEHFVVRIPEGTPLDATAPLLCA  167 (361)
Q Consensus        88 ~~~GdrV~~~~~~~~c~~c~~c~~~~~~~c~~~~~~~~~~~~~~~~~~g~~a~~v~v~~~~~~~ip~~~~~~~aa~l~~~  167 (361)
                      +++||+|+..+..                                ...|+|++|+.++.+.++++|+++++..++.+++.
T Consensus        81 ~~~G~~V~~~~~~--------------------------------~~~g~~~~~~~~~~~~~~~~p~~~~~~~~~~~~~~  128 (309)
T cd05289          81 FKVGDEVFGMTPF--------------------------------TRGGAYAEYVVVPADELALKPANLSFEEAAALPLA  128 (309)
T ss_pred             CCCCCEEEEccCC--------------------------------CCCCcceeEEEecHHHhccCCCCCCHHHHHhhhHH
Confidence            9999999753210                                23689999999999999999999999999999999


Q ss_pred             hhhhhhHhhhcCCCCCCCEEEEEcC-ChHHHHHHHHHHHcCCeEEEEeCCchhHHHHHHHcCCCEEecCCCHHHHHHhc-
Q 018067          168 GITVYSPLRFYGLDKPGMHVGVVGL-GGLGHVAVKFAKAMGVKVTVISTSPSKKSEAIERLGADSFLVSRDQDEMQAAM-  245 (361)
Q Consensus       168 ~~ta~~~l~~~~~~~~g~~vlV~Ga-g~vG~~a~~la~~~g~~vi~~~~~~~~~~~~~~~~g~~~vv~~~~~~~~~~~~-  245 (361)
                      +.++|+++.....+.+|++++|+|+ |.+|++++++++..|++|+++++++ +... .+++|++.+++....+...... 
T Consensus       129 ~~~a~~~~~~~~~~~~~~~vlv~g~~g~~g~~~~~~a~~~g~~v~~~~~~~-~~~~-~~~~g~~~~~~~~~~~~~~~~~~  206 (309)
T cd05289         129 GLTAWQALFELGGLKAGQTVLIHGAAGGVGSFAVQLAKARGARVIATASAA-NADF-LRSLGADEVIDYTKGDFERAAAP  206 (309)
T ss_pred             HHHHHHHHHhhcCCCCCCEEEEecCCchHHHHHHHHHHHcCCEEEEEecch-hHHH-HHHcCCCEEEeCCCCchhhccCC
Confidence            9999999988887899999999997 9999999999999999999888766 5444 4789988887766544332122 


Q ss_pred             CCccEEEEcCCCcccHHHHHhccccCCEEEEecCCCCCcccChHHHHhCCcEEEecccCC-HHHHHHHHHHHHcCCCcee
Q 018067          246 GTMDGIIDTVSAVHPLMPLIGLLKSQGKLVLVGAPEKPLELPAFSLLMGRKIVGGSMIGG-MKETQEMIDFAAKHNIRAD  324 (361)
Q Consensus       246 ~g~d~vid~~g~~~~~~~~~~~l~~~G~~v~~g~~~~~~~~~~~~~~~~~~~i~g~~~~~-~~~~~~~~~ll~~~~~~~~  324 (361)
                      .++|++||++|+.. ...++++++++|+++.+|.......    ....++.++....... .+.++++++++.++.+++.
T Consensus       207 ~~~d~v~~~~~~~~-~~~~~~~l~~~g~~v~~g~~~~~~~----~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  281 (309)
T cd05289         207 GGVDAVLDTVGGET-LARSLALVKPGGRLVSIAGPPPAEQ----AAKRRGVRAGFVFVEPDGEQLAELAELVEAGKLRPV  281 (309)
T ss_pred             CCceEEEECCchHH-HHHHHHHHhcCcEEEEEcCCCcchh----hhhhccceEEEEEecccHHHHHHHHHHHHCCCEEEe
Confidence            36999999999885 8899999999999999987543211    2233455554443222 5678899999999988765


Q ss_pred             E-EEEecccHHHHHHHHHcCCCceEEEE
Q 018067          325 I-EVIPADYVNTALERLAKADVRYRFVI  351 (361)
Q Consensus       325 ~-~~~~l~~~~~a~~~~~~~~~~gkvvi  351 (361)
                      + +.|++++++++++.+.+++..+|+++
T Consensus       282 ~~~~~~~~~~~~a~~~~~~~~~~~kvv~  309 (309)
T cd05289         282 VDRVFPLEDAAEAHERLESGHARGKVVL  309 (309)
T ss_pred             eccEEcHHHHHHHHHHHHhCCCCCcEeC
Confidence            5 89999999999999998887788764

Members identified as zinc-dependent alcohol dehydrogenases and quinone oxidoreductase. QOR catalyzes the conversion of a quinone + NAD(P)H to a hydroquinone + NAD(P)+. Quinones are cyclic diones derived from aromatic compounds. Membrane bound QOR actin the respiratory chains of bacteria and mitochondria, while soluble QOR acts to protect from toxic quinones (e.g. DT-diaphorase) or as a soluble eye-lens protein in some vertebrates (e.g. zeta-crystalin). QOR reduces quinones through a semi-quinone intermediate via a NAD(P)H-dependent single electron transfer. QOR is a member of the medium chain dehydrogenase/reductase family, but lacks the zinc-binding sites of the prototypical alcohol dehydrogenases of this group. NAD(P)(H)-dependent oxidoreductases are the major enzymes in the interconversion of alcohols and aldehydes, or ketones. Alcohol dehydrogenase in the liver converts et

>cd08268 MDR2 Medium chain dehydrogenases/reductase (MDR)/zinc-dependent alcohol dehydrogenase-like family

Probab=100.00  E-value=4.8e-32  Score=250.52  Aligned_cols=310  Identities=24%  Similarity=0.321  Sum_probs=248.5

Q ss_pred             cceeeeeecCCCCCccceeeccCCCCCCeEEEEEeeeccCcchHHhHhcCCCC-CCCCCcccccccEEEEEeCCCCCCCC
Q 018067           11 KNAFGWAAKDTSGVLSPFHFSRRATGEKDVTFKVTHCGICHSDLHMIKNEWGN-TIYPIVPGHEIVGVVTEVGSKVSKFK   89 (361)
Q Consensus        11 ~~~~~~~~~~~~~~l~~~~~~~p~~~~~evlV~v~~~~i~~~D~~~~~g~~~~-~~~p~~lG~e~~G~Vv~vG~~v~~~~   89 (361)
                      |+++.+...+.+..+++.+.+.|.+.+++++|++.++++|+.|+....+.... ..+|.++|||++|+|+.+|+++..|+
T Consensus         1 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~i~v~~~~~~~~d~~~~~~~~~~~~~~~~~~g~e~~G~v~~~G~~~~~~~   80 (328)
T cd08268           1 MRAVRFHQFGGPEVLRIEELPVPAPGAGEVLIRVEAIGLNRADAMFRRGAYIEPPPLPARLGYEAAGVVEAVGAGVTGFA   80 (328)
T ss_pred             CeEEEEeccCCcceeEEeecCCCCCCCCeEEEEEEEEecChHHhheeccccCCCCCCCCCCCcceEEEEEeeCCCCCcCC
Confidence            46666665455667777788888899999999999999999999887765432 24577899999999999999999999


Q ss_pred             CCCEEEeccccCCCCCCcccccCCCCCCcchhcccccccCCCCcCCCcceeEEeecCCceEECCCCCCcccccccchhhh
Q 018067           90 VGDKVGVGCMVGSCRSCDSCAIDLENYCPKVIMTYANKYHDGTITYGGYSDIMVADEHFVVRIPEGTPLDATAPLLCAGI  169 (361)
Q Consensus        90 ~GdrV~~~~~~~~c~~c~~c~~~~~~~c~~~~~~~~~~~~~~~~~~g~~a~~v~v~~~~~~~ip~~~~~~~aa~l~~~~~  169 (361)
                      +||+|+..+..                              .....|++++|+.++.+.++++|+++++.+++.+++.+.
T Consensus        81 ~Gd~V~~~~~~------------------------------~~~~~g~~~~~~~~~~~~~~~~p~~~~~~~~~~~~~~~~  130 (328)
T cd08268          81 VGDRVSVIPAA------------------------------DLGQYGTYAEYALVPAAAVVKLPDGLSFVEAAALWMQYL  130 (328)
T ss_pred             CCCEEEecccc------------------------------ccCCCccceEEEEechHhcEeCCCCCCHHHHHHhhhHHH
Confidence            99999753210                              112468999999999999999999999999999999999


Q ss_pred             hhhhHhhhcCCCCCCCEEEEEcC-ChHHHHHHHHHHHcCCeEEEEeCCchhHHHHHHHcCCCEEecCCCHHH---HHHhc
Q 018067          170 TVYSPLRFYGLDKPGMHVGVVGL-GGLGHVAVKFAKAMGVKVTVISTSPSKKSEAIERLGADSFLVSRDQDE---MQAAM  245 (361)
Q Consensus       170 ta~~~l~~~~~~~~g~~vlV~Ga-g~vG~~a~~la~~~g~~vi~~~~~~~~~~~~~~~~g~~~vv~~~~~~~---~~~~~  245 (361)
                      ++|.++.....+.++++++|+|+ |.+|++++++++..|++++.++++.++...+ +++|++.+++.+..+.   +....
T Consensus       131 ~a~~~~~~~~~~~~~~~vli~g~~~~~g~~~~~~~~~~g~~v~~~~~~~~~~~~~-~~~g~~~~~~~~~~~~~~~~~~~~  209 (328)
T cd08268         131 TAYGALVELAGLRPGDSVLITAASSSVGLAAIQIANAAGATVIATTRTSEKRDAL-LALGAAHVIVTDEEDLVAEVLRIT  209 (328)
T ss_pred             HHHHHHHHhcCCCCCCEEEEecCccHHHHHHHHHHHHcCCEEEEEcCCHHHHHHH-HHcCCCEEEecCCccHHHHHHHHh
Confidence            99999988788899999999997 9999999999999999999999888777666 6789888777665332   33333


Q ss_pred             C--CccEEEEcCCCcccHHHHHhccccCCEEEEecCCCC-CcccChHHHHhCCcEEEecccCC----HH----HHHHHHH
Q 018067          246 G--TMDGIIDTVSAVHPLMPLIGLLKSQGKLVLVGAPEK-PLELPAFSLLMGRKIVGGSMIGG----MK----ETQEMID  314 (361)
Q Consensus       246 ~--g~d~vid~~g~~~~~~~~~~~l~~~G~~v~~g~~~~-~~~~~~~~~~~~~~~i~g~~~~~----~~----~~~~~~~  314 (361)
                      .  ++|++++++|+.. ...++++++++|+++.+|.... ...++....+.++.++.+.....    ..    .++.+.+
T Consensus       210 ~~~~~d~vi~~~~~~~-~~~~~~~l~~~g~~v~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  288 (328)
T cd08268         210 GGKGVDVVFDPVGGPQ-FAKLADALAPGGTLVVYGALSGEPTPFPLKAALKKSLTFRGYSLDEITLDPEARRRAIAFILD  288 (328)
T ss_pred             CCCCceEEEECCchHh-HHHHHHhhccCCEEEEEEeCCCCCCCCchHHHhhcCCEEEEEecccccCCHHHHHHHHHHHHH
Confidence            2  6999999999965 8899999999999999986542 22344443467888887765432    12    3445556


Q ss_pred             HHHcCCCceeE-EEEecccHHHHHHHHHcCCCceEEEEE
Q 018067          315 FAAKHNIRADI-EVIPADYVNTALERLAKADVRYRFVID  352 (361)
Q Consensus       315 ll~~~~~~~~~-~~~~l~~~~~a~~~~~~~~~~gkvvi~  352 (361)
                      ++.++.+.+.. +.|+++++.++++.+.+++..+|++++
T Consensus       289 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~vv~~  327 (328)
T cd08268         289 GLASGALKPVVDRVFPFDDIVEAHRYLESGQQIGKIVVT  327 (328)
T ss_pred             HHHCCCCcCCcccEEcHHHHHHHHHHHHcCCCCceEEEe
Confidence            67778777655 789999999999999988877999875

This group is a member of the medium chain dehydrogenases/reductase (MDR)/zinc-dependent alcohol dehydrogenase-like family, but lacks the zinc-binding sites of the zinc-dependent alcohol dehydrogenases. The medium chain dehydrogenases/reductase (MDR)/zinc-dependent alcohol dehydrogenase-like family, which contains the zinc-dependent alcohol dehydrogenase (ADH-Zn) and related proteins, is a diverse group of proteins related to the first identified member, class I mammalian ADH. MDRs display a broad range of activities and are distinguished from the smaller short chain dehydrogenases (~ 250 amino acids vs. the ~ 350 amino acids of the MDR). The MDR proteins have 2 domains: a C-terminal NAD(P)-binding Rossmann fold domain of a beta-alpha form and an N-terminal catalytic domain with distant homology to GroES. The MDR group contains a host of activities, including the founding alcoh

>cd08267 MDR1 Medium chain dehydrogenases/reductase (MDR)/zinc-dependent alcohol dehydrogenase-like family

Probab=100.00  E-value=3.4e-32  Score=250.91  Aligned_cols=301  Identities=27%  Similarity=0.318  Sum_probs=234.2

Q ss_pred             eeecCCCCCc--cceeeccCCCCCCeEEEEEeeeccCcchHHhHhcCCCC---CCCCCcccccccEEEEEeCCCCCCCCC
Q 018067           16 WAAKDTSGVL--SPFHFSRRATGEKDVTFKVTHCGICHSDLHMIKNEWGN---TIYPIVPGHEIVGVVTEVGSKVSKFKV   90 (361)
Q Consensus        16 ~~~~~~~~~l--~~~~~~~p~~~~~evlV~v~~~~i~~~D~~~~~g~~~~---~~~p~~lG~e~~G~Vv~vG~~v~~~~~   90 (361)
                      ++.++++.++  ++.+.+.|.+.++||+|+++++++|++|++.+.|..+.   ...|..+|||++|+|+++|+++.++++
T Consensus         3 ~~~~~~~~~~~~~~~~~~~~~~~~~~v~v~v~~~~i~~~d~~~~~g~~~~~~~~~~~~~~g~e~~G~v~~~G~~v~~~~~   82 (319)
T cd08267           3 YTRYGSPEVLLLLEVEVPIPTPKPGEVLVKVHAASVNPVDWKLRRGPPKLLLGRPFPPIPGMDFAGEVVAVGSGVTRFKV   82 (319)
T ss_pred             eCCCCChhhhhhccccCCCCCCCCCEEEEEEEEeeCCHHHHHHHcCCCcccccCCCCCcccceeeEEEEEeCCCCCCCCC
Confidence            3445666665  77788999999999999999999999999988775521   234678999999999999999999999


Q ss_pred             CCEEEeccccCCCCCCcccccCCCCCCcchhcccccccCCCCcCCCcceeEEeecCCceEECCCCCCcccccccchhhhh
Q 018067           91 GDKVGVGCMVGSCRSCDSCAIDLENYCPKVIMTYANKYHDGTITYGGYSDIMVADEHFVVRIPEGTPLDATAPLLCAGIT  170 (361)
Q Consensus        91 GdrV~~~~~~~~c~~c~~c~~~~~~~c~~~~~~~~~~~~~~~~~~g~~a~~v~v~~~~~~~ip~~~~~~~aa~l~~~~~t  170 (361)
                      ||+|+.....                                ...|+|++|+.++.+.++++|+++++++++.+++.+.+
T Consensus        83 Gd~V~~~~~~--------------------------------~~~g~~~~~~~~~~~~~~~ip~~~~~~~~~~~~~~~~~  130 (319)
T cd08267          83 GDEVFGRLPP--------------------------------KGGGALAEYVVAPESGLAKKPEGVSFEEAAALPVAGLT  130 (319)
T ss_pred             CCEEEEeccC--------------------------------CCCceeeEEEEechhheEECCCCCCHHHHHhhhhHHHH
Confidence            9999742210                                13588999999999999999999999999999999999


Q ss_pred             hhhHhhhcCCCCCCCEEEEEcC-ChHHHHHHHHHHHcCCeEEEEeCCchhHHHHHHHcCCCEEecCCCHHHHHHhc--CC
Q 018067          171 VYSPLRFYGLDKPGMHVGVVGL-GGLGHVAVKFAKAMGVKVTVISTSPSKKSEAIERLGADSFLVSRDQDEMQAAM--GT  247 (361)
Q Consensus       171 a~~~l~~~~~~~~g~~vlV~Ga-g~vG~~a~~la~~~g~~vi~~~~~~~~~~~~~~~~g~~~vv~~~~~~~~~~~~--~g  247 (361)
                      ||+++.....+++|++|+|+|+ |.+|++++++|+.+|++|+.++++ +++..+ +++|++.+++....+......  .+
T Consensus       131 a~~~~~~~~~~~~g~~vli~g~~g~~g~~~~~la~~~g~~v~~~~~~-~~~~~~-~~~g~~~~~~~~~~~~~~~~~~~~~  208 (319)
T cd08267         131 ALQALRDAGKVKPGQRVLINGASGGVGTFAVQIAKALGAHVTGVCST-RNAELV-RSLGADEVIDYTTEDFVALTAGGEK  208 (319)
T ss_pred             HHHHHHHhcCCCCCCEEEEEcCCcHHHHHHHHHHHHcCCEEEEEeCH-HHHHHH-HHcCCCEeecCCCCCcchhccCCCC
Confidence            9999998888899999999997 999999999999999999988865 555444 889998888766543322222  36


Q ss_pred             ccEEEEcCCCcc-cHHHHHhccccCCEEEEecCCCCCcccC-----hHH-HHhCCcEEEecccCCHHHHHHHHHHHHcCC
Q 018067          248 MDGIIDTVSAVH-PLMPLIGLLKSQGKLVLVGAPEKPLELP-----AFS-LLMGRKIVGGSMIGGMKETQEMIDFAAKHN  320 (361)
Q Consensus       248 ~d~vid~~g~~~-~~~~~~~~l~~~G~~v~~g~~~~~~~~~-----~~~-~~~~~~~i~g~~~~~~~~~~~~~~ll~~~~  320 (361)
                      +|++++++|+.. .....+..++++|+++.+|.........     ... ...+.+.... .....+.+.++++++.+++
T Consensus       209 ~d~vi~~~~~~~~~~~~~~~~l~~~g~~i~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~~~~~~~~~~~~~~l~~~~  287 (319)
T cd08267         209 YDVIFDAVGNSPFSLYRASLALKPGGRYVSVGGGPSGLLLVLLLLPLTLGGGGRRLKFFL-AKPNAEDLEQLAELVEEGK  287 (319)
T ss_pred             CcEEEECCCchHHHHHHhhhccCCCCEEEEeccccccccccccccchhhccccceEEEEE-ecCCHHHHHHHHHHHHCCC
Confidence            999999999532 2334444599999999998754321111     111 1122233222 2223678999999999999


Q ss_pred             CceeE-EEEecccHHHHHHHHHcCCCceEEEE
Q 018067          321 IRADI-EVIPADYVNTALERLAKADVRYRFVI  351 (361)
Q Consensus       321 ~~~~~-~~~~l~~~~~a~~~~~~~~~~gkvvi  351 (361)
                      +++.+ +.|+++++++|++.+.+++..+|+++
T Consensus       288 ~~~~~~~~~~~~~i~~a~~~~~~~~~~~~vvv  319 (319)
T cd08267         288 LKPVIDSVYPLEDAPEAYRRLKSGRARGKVVI  319 (319)
T ss_pred             eeeeeeeEEcHHHHHHHHHHHhcCCCCCcEeC
Confidence            88655 89999999999999998887788764

This group is a member of the medium chain dehydrogenases/reductase (MDR)/zinc-dependent alcohol dehydrogenase-like family, but lacks the zinc-binding sites of the zinc-dependent alcohol dehydrogenases. The medium chain dehydrogenases/reductase (MDR)/zinc-dependent alcohol dehydrogenase-like family, which contains the zinc-dependent alcohol dehydrogenase (ADH-Zn) and related proteins, is a diverse group of proteins related to the first identified member, class I mammalian ADH. MDRs display a broad range of activities and are distinguished from the smaller short chain dehydrogenases (~ 250 amino acids vs. the ~ 350 amino acids of the MDR). The MDR proteins have 2 domains: a C-terminal NAD(P)-binding Rossmann fold domain of a beta-alpha form and an N-terminal catalytic domain with distant homology to GroES. The MDR group contains a host of activities, including the founding alcoh

>cd08241 QOR1 Quinone oxidoreductase (QOR)

Probab=100.00  E-value=1.5e-31  Score=246.58  Aligned_cols=303  Identities=30%  Similarity=0.423  Sum_probs=245.3

Q ss_pred             cceeeeeecCCCCCccceeeccCCCC-CCeEEEEEeeeccCcchHHhHhcCCCC-CCCCCcccccccEEEEEeCCCCCCC
Q 018067           11 KNAFGWAAKDTSGVLSPFHFSRRATG-EKDVTFKVTHCGICHSDLHMIKNEWGN-TIYPIVPGHEIVGVVTEVGSKVSKF   88 (361)
Q Consensus        11 ~~~~~~~~~~~~~~l~~~~~~~p~~~-~~evlV~v~~~~i~~~D~~~~~g~~~~-~~~p~~lG~e~~G~Vv~vG~~v~~~   88 (361)
                      |+++.+...+.+..+++.+.+ |.+. +++++|++.++++|++|+..+.|.... ...|.++|||++|+|+.+|+++..+
T Consensus         1 ~~~~~~~~~~~~~~~~~~~~~-~~~~~~~~v~i~v~~~~i~~~d~~~~~g~~~~~~~~~~~~g~e~~G~v~~~g~~~~~~   79 (323)
T cd08241           1 MKAVVCKELGGPEDLVLEEVP-PEPGAPGEVRIRVEAAGVNFPDLLMIQGKYQVKPPLPFVPGSEVAGVVEAVGEGVTGF   79 (323)
T ss_pred             CeEEEEecCCCcceeEEecCC-CCCCCCCeEEEEEEEEecCHHHHHHHcCCCCCCCCCCCcccceeEEEEEEeCCCCCCC
Confidence            456666544556667777777 6666 599999999999999999988775532 2346689999999999999999999


Q ss_pred             CCCCEEEeccccCCCCCCcccccCCCCCCcchhcccccccCCCCcCCCcceeEEeecCCceEECCCCCCcccccccchhh
Q 018067           89 KVGDKVGVGCMVGSCRSCDSCAIDLENYCPKVIMTYANKYHDGTITYGGYSDIMVADEHFVVRIPEGTPLDATAPLLCAG  168 (361)
Q Consensus        89 ~~GdrV~~~~~~~~c~~c~~c~~~~~~~c~~~~~~~~~~~~~~~~~~g~~a~~v~v~~~~~~~ip~~~~~~~aa~l~~~~  168 (361)
                      ++||+|+..                                   ...|++++|+.++.+.++++|+++++.+++.+...+
T Consensus        80 ~~G~~V~~~-----------------------------------~~~~~~~~~~~~~~~~~~~ip~~~~~~~~~~~~~~~  124 (323)
T cd08241          80 KVGDRVVAL-----------------------------------TGQGGFAEEVVVPAAAVFPLPDGLSFEEAAALPVTY  124 (323)
T ss_pred             CCCCEEEEe-----------------------------------cCCceeEEEEEcCHHHceeCCCCCCHHHHhhhhhHH
Confidence            999999741                                   126889999999999999999999999998899999


Q ss_pred             hhhhhHhhhcCCCCCCCEEEEEcC-ChHHHHHHHHHHHcCCeEEEEeCCchhHHHHHHHcCCCEEecCCCHHH---HHHh
Q 018067          169 ITVYSPLRFYGLDKPGMHVGVVGL-GGLGHVAVKFAKAMGVKVTVISTSPSKKSEAIERLGADSFLVSRDQDE---MQAA  244 (361)
Q Consensus       169 ~ta~~~l~~~~~~~~g~~vlV~Ga-g~vG~~a~~la~~~g~~vi~~~~~~~~~~~~~~~~g~~~vv~~~~~~~---~~~~  244 (361)
                      .+||.++.....++++++|+|+|+ |.+|++++++|+..|++|+.+++++++...+ +++|++.+++....+.   +...
T Consensus       125 ~~a~~~~~~~~~~~~~~~vli~g~~~~~g~~~~~~a~~~g~~v~~~~~~~~~~~~~-~~~g~~~~~~~~~~~~~~~i~~~  203 (323)
T cd08241         125 GTAYHALVRRARLQPGETVLVLGAAGGVGLAAVQLAKALGARVIAAASSEEKLALA-RALGADHVIDYRDPDLRERVKAL  203 (323)
T ss_pred             HHHHHHHHHhcCCCCCCEEEEEcCCchHHHHHHHHHHHhCCEEEEEeCCHHHHHHH-HHcCCceeeecCCccHHHHHHHH
Confidence            999999887777899999999998 9999999999999999999999888776666 6789888777665433   3333


Q ss_pred             cC--CccEEEEcCCCcccHHHHHhccccCCEEEEecCCCCCcc-cChHHHHhCCcEEEecccCC---------HHHHHHH
Q 018067          245 MG--TMDGIIDTVSAVHPLMPLIGLLKSQGKLVLVGAPEKPLE-LPAFSLLMGRKIVGGSMIGG---------MKETQEM  312 (361)
Q Consensus       245 ~~--g~d~vid~~g~~~~~~~~~~~l~~~G~~v~~g~~~~~~~-~~~~~~~~~~~~i~g~~~~~---------~~~~~~~  312 (361)
                      ..  ++|.++|++|+.. ...++++++++|+++.+|....... +.....+.+++++.+.....         .+.++++
T Consensus       204 ~~~~~~d~v~~~~g~~~-~~~~~~~~~~~g~~v~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  282 (323)
T cd08241         204 TGGRGVDVVYDPVGGDV-FEASLRSLAWGGRLLVIGFASGEIPQIPANLLLLKNISVVGVYWGAYARREPELLRANLAEL  282 (323)
T ss_pred             cCCCCcEEEEECccHHH-HHHHHHhhccCCEEEEEccCCCCcCcCCHHHHhhcCcEEEEEecccccchhHHHHHHHHHHH
Confidence            33  6999999999865 8889999999999999987543332 33434566888888876432         2457788


Q ss_pred             HHHHHcCCCceeE-EEEecccHHHHHHHHHcCCCceEEEE
Q 018067          313 IDFAAKHNIRADI-EVIPADYVNTALERLAKADVRYRFVI  351 (361)
Q Consensus       313 ~~ll~~~~~~~~~-~~~~l~~~~~a~~~~~~~~~~gkvvi  351 (361)
                      ++++.++.+.+.. +.|++++++++++.+.+++..+|+++
T Consensus       283 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~vvv  322 (323)
T cd08241         283 FDLLAEGKIRPHVSAVFPLEQAAEALRALADRKATGKVVL  322 (323)
T ss_pred             HHHHHCCCcccccceEEcHHHHHHHHHHHHhCCCCCcEEe
Confidence            8999999887655 88999999999999988887788876

QOR catalyzes the conversion of a quinone + NAD(P)H to a hydroquinone + NAD(P)+. Quinones are cyclic diones derived from aromatic compounds. Membrane bound QOR acts in the respiratory chains of bacteria and mitochondria, while soluble QOR acts to protect from toxic quinones (e.g. DT-diaphorase) or as a soluble eye-lens protein in some vertebrates (e.g. zeta-crystalin). QOR reduces quinones through a semi-quinone intermediate via a NAD(P)H-dependent single electron transfer. QOR is a member of the medium chain dehydrogenase/reductase family, but lacks the zinc-binding sites of the prototypical alcohol dehydrogenases of this group. NAD(P)(H)-dependent oxidoreductases are the major enzymes in the interconversion of alcohols and aldehydes, or ketones. Alcohol dehydrogenase in the liver converts ethanol and NAD+ to acetaldehyde and NADH, while in yeast and some other microorganisms ADH catalyzes the conversion acetaldehyde to ethanol in alcoholic

>cd08251 polyketide_synthase polyketide synthase

Probab=100.00  E-value=1.6e-31  Score=244.48  Aligned_cols=283  Identities=22%  Similarity=0.334  Sum_probs=228.1

Q ss_pred             cCCCCCCeEEEEEeeeccCcchHHhHhcCCCC-CCCCCcccccccEEEEEeCCCCCCCCCCCEEEeccccCCCCCCcccc
Q 018067           32 RRATGEKDVTFKVTHCGICHSDLHMIKNEWGN-TIYPIVPGHEIVGVVTEVGSKVSKFKVGDKVGVGCMVGSCRSCDSCA  110 (361)
Q Consensus        32 ~p~~~~~evlV~v~~~~i~~~D~~~~~g~~~~-~~~p~~lG~e~~G~Vv~vG~~v~~~~~GdrV~~~~~~~~c~~c~~c~  110 (361)
                      .|.+.+++++|++.++++|++|+..+.+.++. ..+|.++|+|++|+|+++|+++.+|++||+|+...            
T Consensus         2 ~p~~~~~~v~v~v~~~~i~~~d~~~~~~~~~~~~~~~~~~g~e~~G~v~~~G~~v~~~~~Gd~V~~~~------------   69 (303)
T cd08251           2 VAPPGPGEVRIQVRAFSLNFGDLLCVRGLYPTMPPYPFTPGFEASGVVRAVGPHVTRLAVGDEVIAGT------------   69 (303)
T ss_pred             CCCCCCCEEEEEEEEeecChHHHHHHCCCCCCCCCCCCCcCceeeEEEEEECCCCCCCCCCCEEEEec------------
Confidence            57889999999999999999999998876542 35688999999999999999999999999997521            


Q ss_pred             cCCCCCCcchhcccccccCCCCcCCCcceeEEeecCCceEECCCCCCcccccccchhhhhhhhHhhhcCCCCCCCEEEEE
Q 018067          111 IDLENYCPKVIMTYANKYHDGTITYGGYSDIMVADEHFVVRIPEGTPLDATAPLLCAGITVYSPLRFYGLDKPGMHVGVV  190 (361)
Q Consensus       111 ~~~~~~c~~~~~~~~~~~~~~~~~~g~~a~~v~v~~~~~~~ip~~~~~~~aa~l~~~~~ta~~~l~~~~~~~~g~~vlV~  190 (361)
                                           ....|+|++|+.++.+.++++|+++++.+++.++..+.+||++++ ...+++|++++|+
T Consensus        70 ---------------------~~~~g~~~~~~~~~~~~~~~~p~~~~~~~aa~~~~~~~ta~~~l~-~~~~~~g~~vli~  127 (303)
T cd08251          70 ---------------------GESMGGHATLVTVPEDQVVRKPASLSFEEACALPVVFLTVIDAFA-RAGLAKGEHILIQ  127 (303)
T ss_pred             ---------------------CCCCcceeeEEEccHHHeEECCCCCCHHHHHHhHHHHHHHHHHHH-hcCCCCCCEEEEe
Confidence                                 024689999999999999999999999999999999999999986 5678999999998


Q ss_pred             cC-ChHHHHHHHHHHHcCCeEEEEeCCchhHHHHHHHcCCCEEecCCCHHH---HHHhcC--CccEEEEcCCCcccHHHH
Q 018067          191 GL-GGLGHVAVKFAKAMGVKVTVISTSPSKKSEAIERLGADSFLVSRDQDE---MQAAMG--TMDGIIDTVSAVHPLMPL  264 (361)
Q Consensus       191 Ga-g~vG~~a~~la~~~g~~vi~~~~~~~~~~~~~~~~g~~~vv~~~~~~~---~~~~~~--g~d~vid~~g~~~~~~~~  264 (361)
                      |+ |.+|++++++++++|++++.++++++++..+ +++|++.+++....+.   +..+..  ++|+++|++++.. ....
T Consensus       128 ~~~~~~g~~~~~~a~~~g~~v~~~~~~~~~~~~~-~~~g~~~~~~~~~~~~~~~i~~~~~~~~~d~v~~~~~~~~-~~~~  205 (303)
T cd08251         128 TATGGTGLMAVQLARLKGAEIYATASSDDKLEYL-KQLGVPHVINYVEEDFEEEIMRLTGGRGVDVVINTLSGEA-IQKG  205 (303)
T ss_pred             cCCcHHHHHHHHHHHHcCCEEEEEcCCHHHHHHH-HHcCCCEEEeCCCccHHHHHHHHcCCCCceEEEECCcHHH-HHHH
Confidence            76 9999999999999999999998888777666 7899988888765433   333333  7999999998755 8889


Q ss_pred             HhccccCCEEEEecCCCC--CcccChHHHHhCCcEEE-----ecccCC----HHHHHHHHHHHHcCCCceeE-EEEeccc
Q 018067          265 IGLLKSQGKLVLVGAPEK--PLELPAFSLLMGRKIVG-----GSMIGG----MKETQEMIDFAAKHNIRADI-EVIPADY  332 (361)
Q Consensus       265 ~~~l~~~G~~v~~g~~~~--~~~~~~~~~~~~~~~i~-----g~~~~~----~~~~~~~~~ll~~~~~~~~~-~~~~l~~  332 (361)
                      +++++++|+++.+|..+.  ...++...+ .++..+.     +.....    .+.+.++++++.++.+++.. +.|++++
T Consensus       206 ~~~l~~~g~~v~~~~~~~~~~~~~~~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~  284 (303)
T cd08251         206 LNCLAPGGRYVEIAMTALKSAPSVDLSVL-SNNQSFHSVDLRKLLLLDPEFIADYQAEMVSLVEEGELRPTVSRIFPFDD  284 (303)
T ss_pred             HHHhccCcEEEEEeccCCCccCccChhHh-hcCceEEEEehHHhhhhCHHHHHHHHHHHHHHHHCCCccCCCceEEcHHH
Confidence            999999999999986532  122333222 2222222     221111    13467788899999888655 8999999


Q ss_pred             HHHHHHHHHcCCCceEEEE
Q 018067          333 VNTALERLAKADVRYRFVI  351 (361)
Q Consensus       333 ~~~a~~~~~~~~~~gkvvi  351 (361)
                      ++++++.+.+++..+|+++
T Consensus       285 ~~~~~~~~~~~~~~~~iv~  303 (303)
T cd08251         285 IGEAYRYLSDRENIGKVVV  303 (303)
T ss_pred             HHHHHHHHHhCCCcceEeC
Confidence            9999999999888888874

Polyketide synthases produce polyketides in step by step mechanism that is similar to fatty acid synthesis. Enoyl reductase reduces a double to single bond. Erythromycin is one example of a polyketide generated by 3 complex enzymes (megasynthases). 2-enoyl thioester reductase (ETR) catalyzes the NADPH-dependent dependent conversion of trans-2-enoyl acyl carrier protein/coenzyme A (ACP/CoA) to acyl-(ACP/CoA) in fatty acid synthesis. 2-enoyl thioester reductase activity has been linked in Candida tropicalis as essential in maintaining mitiochondrial respiratory function. This ETR family is a part of the medium chain dehydrogenase/reductase family, but lack the zinc coordination sites characteristic of the alcohol dehydrogenases in this family. NAD(P)(H)-dependent oxidoreductases are the major enzymes in the interconversion of alcohols and aldehydes, or ketones. Alcohol dehydrogenase in the liver converts ethanol and NAD+ to acetaldehyde a

>cd08275 MDR3 Medium chain dehydrogenases/reductase (MDR)/zinc-dependent alcohol dehydrogenase-like family

Probab=100.00  E-value=3.8e-31  Score=245.81  Aligned_cols=301  Identities=26%  Similarity=0.359  Sum_probs=236.9

Q ss_pred             eeeecCCCCCccceeeccCCCCCCeEEEEEeeeccCcchHHhHhcCCC-CCCCCCcccccccEEEEEeCCCCCCCCCCCE
Q 018067           15 GWAAKDTSGVLSPFHFSRRATGEKDVTFKVTHCGICHSDLHMIKNEWG-NTIYPIVPGHEIVGVVTEVGSKVSKFKVGDK   93 (361)
Q Consensus        15 ~~~~~~~~~~l~~~~~~~p~~~~~evlV~v~~~~i~~~D~~~~~g~~~-~~~~p~~lG~e~~G~Vv~vG~~v~~~~~Gdr   93 (361)
                      .+...+.++.+++.+.+.|.+.+++++|++.++++|+.|+..+.|..+ ....|.++|||++|+|+.+|+.+.+|++||+
T Consensus         4 ~~~~~~~~~~~~~~~~~~~~~~~~~v~i~v~~~~i~~~d~~~~~g~~~~~~~~~~~~g~e~~G~v~~~g~~~~~~~~G~~   83 (337)
T cd08275           4 VLTGFGGLDKLKVEKEALPEPSSGEVRVRVEACGLNFADLMARQGLYDSAPKPPFVPGFECAGTVEAVGEGVKDFKVGDR   83 (337)
T ss_pred             EEcCCCCccceEEEecCCCCCCCCEEEEEEEEEecCHHHHHHHCCCCCCCCCCCCCCcceeEEEEEEECCCCcCCCCCCE
Confidence            333334445677777777889999999999999999999998877553 2345778999999999999999999999999


Q ss_pred             EEeccccCCCCCCcccccCCCCCCcchhcccccccCCCCcCCCcceeEEeecCCceEECCCCCCcccccccchhhhhhhh
Q 018067           94 VGVGCMVGSCRSCDSCAIDLENYCPKVIMTYANKYHDGTITYGGYSDIMVADEHFVVRIPEGTPLDATAPLLCAGITVYS  173 (361)
Q Consensus        94 V~~~~~~~~c~~c~~c~~~~~~~c~~~~~~~~~~~~~~~~~~g~~a~~v~v~~~~~~~ip~~~~~~~aa~l~~~~~ta~~  173 (361)
                      |+..                                   ...|+|++|+.++.+.++++|+++++.+++.+++.+.++|+
T Consensus        84 V~~~-----------------------------------~~~~~~~~~~~~~~~~~~~ip~~~~~~~~~~~~~~~~~a~~  128 (337)
T cd08275          84 VMGL-----------------------------------TRFGGYAEVVNVPADQVFPLPDGMSFEEAAAFPVNYLTAYY  128 (337)
T ss_pred             EEEe-----------------------------------cCCCeeeeEEEecHHHeEECCCCCCHHHHhhhhHHHHHHHH
Confidence            9742                                   23588999999999999999999999999999999999999


Q ss_pred             HhhhcCCCCCCCEEEEEcC-ChHHHHHHHHHHHc-CCeEEEEeCCchhHHHHHHHcCCCEEecCCCHH---HHHHhc-CC
Q 018067          174 PLRFYGLDKPGMHVGVVGL-GGLGHVAVKFAKAM-GVKVTVISTSPSKKSEAIERLGADSFLVSRDQD---EMQAAM-GT  247 (361)
Q Consensus       174 ~l~~~~~~~~g~~vlV~Ga-g~vG~~a~~la~~~-g~~vi~~~~~~~~~~~~~~~~g~~~vv~~~~~~---~~~~~~-~g  247 (361)
                      ++.....+++|++|+|+|+ |.+|++++++|+.+ +..++.. ..+++...+ +.+|++.+++....+   .+.... .+
T Consensus       129 ~~~~~~~~~~~~~vli~g~~g~~g~~~~~~a~~~~~~~~~~~-~~~~~~~~~-~~~g~~~~~~~~~~~~~~~~~~~~~~~  206 (337)
T cd08275         129 ALFELGNLRPGQSVLVHSAAGGVGLAAGQLCKTVPNVTVVGT-ASASKHEAL-KENGVTHVIDYRTQDYVEEVKKISPEG  206 (337)
T ss_pred             HHHHhhCCCCCCEEEEEcCcchHHHHHHHHHHHccCcEEEEe-CCHHHHHHH-HHcCCcEEeeCCCCcHHHHHHHHhCCC
Confidence            9988888899999999998 99999999999998 4333222 223344444 778988888776533   233333 47


Q ss_pred             ccEEEEcCCCcccHHHHHhccccCCEEEEecCCCCC-----------------cccChHHHHhCCcEEEecccCC-----
Q 018067          248 MDGIIDTVSAVHPLMPLIGLLKSQGKLVLVGAPEKP-----------------LELPAFSLLMGRKIVGGSMIGG-----  305 (361)
Q Consensus       248 ~d~vid~~g~~~~~~~~~~~l~~~G~~v~~g~~~~~-----------------~~~~~~~~~~~~~~i~g~~~~~-----  305 (361)
                      +|+++|++|+.. ...++++++++|+++.+|.....                 ..+.....+.+++++.++....     
T Consensus       207 ~d~v~~~~g~~~-~~~~~~~l~~~g~~v~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  285 (337)
T cd08275         207 VDIVLDALGGED-TRKSYDLLKPMGRLVVYGAANLVTGEKRSWFKLAKKWWNRPKVDPMKLISENKSVLGFNLGWLFEER  285 (337)
T ss_pred             ceEEEECCcHHH-HHHHHHhhccCcEEEEEeecCCcCcccccccccccccccccccCHHHHhhcCceEEEeechhhhhCh
Confidence            999999999876 88999999999999999864321                 1122244567888888765421     


Q ss_pred             ---HHHHHHHHHHHHcCCCceeE-EEEecccHHHHHHHHHcCCCceEEEEEe
Q 018067          306 ---MKETQEMIDFAAKHNIRADI-EVIPADYVNTALERLAKADVRYRFVIDV  353 (361)
Q Consensus       306 ---~~~~~~~~~ll~~~~~~~~~-~~~~l~~~~~a~~~~~~~~~~gkvvi~~  353 (361)
                         ...+.++++++.++.+++.. +.|++++++++++.+.+++..+|+++++
T Consensus       286 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~kvv~~~  337 (337)
T cd08275         286 ELLTEVMDKLLKLYEEGKIKPKIDSVFPFEEVGEAMRRLQSRKNIGKVVLTP  337 (337)
T ss_pred             HHHHHHHHHHHHHHHCCCCCCceeeEEcHHHHHHHHHHHHcCCCcceEEEeC
Confidence               12367788889999887665 8999999999999999988889999864

This group is a member of the medium chain dehydrogenases/reductase (MDR)/zinc-dependent alcohol dehydrogenase-like family, but lacks the zinc-binding sites of the zinc-dependent alcohol dehydrogenases. The medium chain dehydrogenases/reductase (MDR)/zinc-dependent alcohol dehydrogenase-like family, which contains the zinc-dependent alcohol dehydrogenase (ADH-Zn) and related proteins, is a diverse group of proteins related to the first identified member, class I mammalian ADH. MDRs display a broad range of activities and are distinguished from the smaller short chain dehydrogenases (~ 250 amino acids vs. the ~ 350 amino acids of the MDR). The MDR proteins have 2 domains: a C-terminal NAD(P)-binding Rossmann fold domain of a beta-alpha form and an N-terminal catalytic domain with distant homology to GroES. The MDR group contains a host of activities, including the founding alcoh

>cd05195 enoyl_red enoyl reductase of polyketide synthase

Probab=99.98  E-value=2.2e-30  Score=235.00  Aligned_cols=273  Identities=22%  Similarity=0.292  Sum_probs=222.5

Q ss_pred             CeEEEEEeeeccCcchHHhHhcCCCCCCCCCcccccccEEEEEeCCCCCCCCCCCEEEeccccCCCCCCcccccCCCCCC
Q 018067           38 KDVTFKVTHCGICHSDLHMIKNEWGNTIYPIVPGHEIVGVVTEVGSKVSKFKVGDKVGVGCMVGSCRSCDSCAIDLENYC  117 (361)
Q Consensus        38 ~evlV~v~~~~i~~~D~~~~~g~~~~~~~p~~lG~e~~G~Vv~vG~~v~~~~~GdrV~~~~~~~~c~~c~~c~~~~~~~c  117 (361)
                      +|++||+.++++|++|++...|..  ..+|.++|||++|+|+++|+.+..|++||+|..                     
T Consensus         1 ~~v~i~v~~~~~~~~d~~~~~g~~--~~~~~~~g~e~~G~v~~~g~~~~~~~~Gd~V~~---------------------   57 (293)
T cd05195           1 DEVEVEVKAAGLNFRDVLVALGLL--PGDETPLGLECSGIVTRVGSGVTGLKVGDRVMG---------------------   57 (293)
T ss_pred             CceEEEEEEEecCHHHHHHHhCCC--CCCCCccceeeeEEEEeecCCccCCCCCCEEEE---------------------
Confidence            589999999999999999988754  245789999999999999999999999999974                     


Q ss_pred             cchhcccccccCCCCcCCCcceeEEeecCCceEECCCCCCcccccccchhhhhhhhHhhhcCCCCCCCEEEEEcC-ChHH
Q 018067          118 PKVIMTYANKYHDGTITYGGYSDIMVADEHFVVRIPEGTPLDATAPLLCAGITVYSPLRFYGLDKPGMHVGVVGL-GGLG  196 (361)
Q Consensus       118 ~~~~~~~~~~~~~~~~~~g~~a~~v~v~~~~~~~ip~~~~~~~aa~l~~~~~ta~~~l~~~~~~~~g~~vlV~Ga-g~vG  196 (361)
                                     ...|+|++|+.++.+.++++|+++++.+++.+++++.++|.++.+...+++|++|+|+|+ |.+|
T Consensus        58 ---------------~~~g~~~~~~~~~~~~~~~~p~~~~~~~~~~~~~~~~~a~~~~~~~~~~~~g~~vlv~g~~g~~g  122 (293)
T cd05195          58 ---------------LAPGAFATHVRVDARLVVKIPDSLSFEEAATLPVAYLTAYYALVDLARLQKGESVLIHAAAGGVG  122 (293)
T ss_pred             ---------------EecCcccceEEechhheEeCCCCCCHHHHhhchHHHHHHHHHHHHHhccCCCCEEEEecCCCHHH
Confidence                           236889999999999999999999999999999999999999887778899999999985 9999


Q ss_pred             HHHHHHHHHcCCeEEEEeCCchhHHHHHHHcC--CCEEecCCCHHH---HHHhc--CCccEEEEcCCCcccHHHHHhccc
Q 018067          197 HVAVKFAKAMGVKVTVISTSPSKKSEAIERLG--ADSFLVSRDQDE---MQAAM--GTMDGIIDTVSAVHPLMPLIGLLK  269 (361)
Q Consensus       197 ~~a~~la~~~g~~vi~~~~~~~~~~~~~~~~g--~~~vv~~~~~~~---~~~~~--~g~d~vid~~g~~~~~~~~~~~l~  269 (361)
                      ++++++++.+|++++.+++++++...+ ++++  ++.+++..+.+.   +....  .++|+++|++|+.. +..++++++
T Consensus       123 ~~~~~~a~~~g~~v~~~~~~~~~~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~d~vi~~~~~~~-~~~~~~~l~  200 (293)
T cd05195         123 QAAIQLAQHLGAEVFATVGSEEKREFL-RELGGPVDHIFSSRDLSFADGILRATGGRGVDVVLNSLSGEL-LRASWRCLA  200 (293)
T ss_pred             HHHHHHHHHcCCEEEEEeCCHHHHHHH-HHhCCCcceEeecCchhHHHHHHHHhCCCCceEEEeCCCchH-HHHHHHhcc
Confidence            999999999999999998888776666 5666  677777765443   33333  27999999999885 899999999


Q ss_pred             cCCEEEEecCCCCC--cccChHHHHhCCcEEEecccC-----C----HHHHHHHHHHHHcCCCceeE-EEEecccHHHHH
Q 018067          270 SQGKLVLVGAPEKP--LELPAFSLLMGRKIVGGSMIG-----G----MKETQEMIDFAAKHNIRADI-EVIPADYVNTAL  337 (361)
Q Consensus       270 ~~G~~v~~g~~~~~--~~~~~~~~~~~~~~i~g~~~~-----~----~~~~~~~~~ll~~~~~~~~~-~~~~l~~~~~a~  337 (361)
                      ++|+++.+|.....  ..++... +.+++++.+....     .    .+.+.++++++.++++++.. +.++++++++++
T Consensus       201 ~~g~~v~~g~~~~~~~~~~~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~a~  279 (293)
T cd05195         201 PFGRFVEIGKRDILSNSKLGMRP-FLRNVSFSSVDLDQLARERPELLRELLREVLELLEAGVLKPLPPTVVPSASEIDAF  279 (293)
T ss_pred             cCceEEEeeccccccCCccchhh-hccCCeEEEEeHHHHhhhChHHHHHHHHHHHHHHHCCCcccCCCeeechhhHHHHH
Confidence            99999999875422  1222222 2345555443221     1    23577888999999988655 789999999999


Q ss_pred             HHHHcCCCceEEEE
Q 018067          338 ERLAKADVRYRFVI  351 (361)
Q Consensus       338 ~~~~~~~~~gkvvi  351 (361)
                      +.+.+++..+|+++
T Consensus       280 ~~~~~~~~~~~ivv  293 (293)
T cd05195         280 RLMQSGKHIGKVVL  293 (293)
T ss_pred             HHHhcCCCCceecC
Confidence            99998887788764

Putative enoyl reductase of polyketide synthase. Polyketide synthases produce polyketides in step by step mechanism that is similar to fatty acid synthesis. Enoyl reductase reduces a double to single bond. Erythromycin is one example of a polyketide generated by 3 complex enzymes (megasynthases). 2-enoyl thioester reductase (ETR) catalyzes the NADPH-dependent dependent conversion of trans-2-enoyl acyl carrier protein/coenzyme A (ACP/CoA) to acyl-(ACP/CoA) in fatty acid synthesis. 2-enoyl thioester reductase activity has been linked in Candida tropicalis as essential in maintaining mitiochondrial respiratory function. This ETR family is a part of the medium chain dehydrogenase/reductase family, but lack the zinc coordination sites characteristic of the alcohol dehydrogenases in this family. NAD(P)(H)-dependent oxidoreductases are the major enzymes in the interconversion of alcohols and aldehydes or ketones. Alcohol dehydrogenase

>smart00829 PKS_ER Enoylreductase

Probab=99.97  E-value=6.1e-30  Score=231.81  Aligned_cols=268  Identities=24%  Similarity=0.334  Sum_probs=217.8

Q ss_pred             EEEeeeccCcchHHhHhcCCCCCCCCCcccccccEEEEEeCCCCCCCCCCCEEEeccccCCCCCCcccccCCCCCCcchh
Q 018067           42 FKVTHCGICHSDLHMIKNEWGNTIYPIVPGHEIVGVVTEVGSKVSKFKVGDKVGVGCMVGSCRSCDSCAIDLENYCPKVI  121 (361)
Q Consensus        42 V~v~~~~i~~~D~~~~~g~~~~~~~p~~lG~e~~G~Vv~vG~~v~~~~~GdrV~~~~~~~~c~~c~~c~~~~~~~c~~~~  121 (361)
                      ||+.++++|++|++.+.|.++   .|.++|||++|+|+++|+.+..|++||+|+.                         
T Consensus         2 i~v~~~~i~~~d~~~~~g~~~---~~~~~g~e~~G~v~~~G~~~~~~~~Gd~V~~-------------------------   53 (288)
T smart00829        2 VEVRAAGLNFRDVLIALGLLP---GEAVLGGECAGVVTRVGPGVTGLAVGDRVMG-------------------------   53 (288)
T ss_pred             eeEEEEecCHHHHHHhcCCCC---CCCCCCceeEEEEEeeCCCCcCCCCCCEEEE-------------------------
Confidence            899999999999999887543   2578999999999999999999999999974                         


Q ss_pred             cccccccCCCCcCCCcceeEEeecCCceEECCCCCCcccccccchhhhhhhhHhhhcCCCCCCCEEEEEcC-ChHHHHHH
Q 018067          122 MTYANKYHDGTITYGGYSDIMVADEHFVVRIPEGTPLDATAPLLCAGITVYSPLRFYGLDKPGMHVGVVGL-GGLGHVAV  200 (361)
Q Consensus       122 ~~~~~~~~~~~~~~g~~a~~v~v~~~~~~~ip~~~~~~~aa~l~~~~~ta~~~l~~~~~~~~g~~vlV~Ga-g~vG~~a~  200 (361)
                                 ...|+|++|+.++.++++++|+++++.+++.+++.+.++|.++.....+++|++|+|+|+ |.+|++++
T Consensus        54 -----------~~~g~~~~~~~~~~~~~~~~p~~~~~~~~~~~~~~~~~a~~~~~~~~~~~~g~~vlv~g~~~~~g~~~~  122 (288)
T smart00829       54 -----------LAPGSFATYVRTDARLVVPIPDGLSFEEAATVPVVFLTAYYALVDLARLRPGESVLIHAAAGGVGQAAI  122 (288)
T ss_pred             -----------EcCCceeeEEEccHHHeEECCCCCCHHHHHhchHHHHHHHHHHHHHhCCCCCCEEEEecCCcHHHHHHH
Confidence                       235889999999999999999999999999999999999999877777899999999986 99999999


Q ss_pred             HHHHHcCCeEEEEeCCchhHHHHHHHcCC--CEEecCCCHHH---HHHhcC--CccEEEEcCCCcccHHHHHhccccCCE
Q 018067          201 KFAKAMGVKVTVISTSPSKKSEAIERLGA--DSFLVSRDQDE---MQAAMG--TMDGIIDTVSAVHPLMPLIGLLKSQGK  273 (361)
Q Consensus       201 ~la~~~g~~vi~~~~~~~~~~~~~~~~g~--~~vv~~~~~~~---~~~~~~--g~d~vid~~g~~~~~~~~~~~l~~~G~  273 (361)
                      ++++.+|++|+.+++++++...+ +++|+  +.++++.+.+.   +.....  ++|.++|++|+.. ...++++++++|+
T Consensus       123 ~~a~~~g~~v~~~~~~~~~~~~~-~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~d~vi~~~~~~~-~~~~~~~l~~~g~  200 (288)
T smart00829      123 QLAQHLGAEVFATAGSPEKRDFL-RELGIPDDHIFSSRDLSFADEILRATGGRGVDVVLNSLAGEF-LDASLRCLAPGGR  200 (288)
T ss_pred             HHHHHcCCEEEEEeCCHHHHHHH-HHcCCChhheeeCCCccHHHHHHHHhCCCCcEEEEeCCCHHH-HHHHHHhccCCcE
Confidence            99999999999999888877666 78998  67777765443   233332  6999999999754 8889999999999


Q ss_pred             EEEecCCCC--CcccChHHHHhCCcEEEecccC--------CHHHHHHHHHHHHcCCCceeE-EEEecccHHHHHHHHHc
Q 018067          274 LVLVGAPEK--PLELPAFSLLMGRKIVGGSMIG--------GMKETQEMIDFAAKHNIRADI-EVIPADYVNTALERLAK  342 (361)
Q Consensus       274 ~v~~g~~~~--~~~~~~~~~~~~~~~i~g~~~~--------~~~~~~~~~~ll~~~~~~~~~-~~~~l~~~~~a~~~~~~  342 (361)
                      ++.+|..+.  ...++... +.+++++.+....        ..+.+.++++++.++++.+.. +.|++++++++++.+..
T Consensus       201 ~v~~g~~~~~~~~~~~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  279 (288)
T smart00829      201 FVEIGKRDIRDNSQLGMAP-FRRNVSYHAVDLDALEEGPDRIRELLAEVLELFAEGVLRPLPVTVFPISDVEDAFRYMQQ  279 (288)
T ss_pred             EEEEcCcCCccccccchhh-hcCCceEEEEEHHHhhcChHHHHHHHHHHHHHHHCCCccCcCceEEcHHHHHHHHHHHhc
Confidence            999986532  22333333 3455555553221        123467788899999887644 88999999999999999


Q ss_pred             CCCceEEEE
Q 018067          343 ADVRYRFVI  351 (361)
Q Consensus       343 ~~~~gkvvi  351 (361)
                      ++..+|+++
T Consensus       280 ~~~~~~ivv  288 (288)
T smart00829      280 GKHIGKVVL  288 (288)
T ss_pred             CCCcceEeC
Confidence            887788763

Enoylreductase in Polyketide synthases.

>KOG1196 consensus Predicted NAD-dependent oxidoreductase [General function prediction only]

Probab=99.96  E-value=5.4e-28  Score=208.28  Aligned_cols=282  Identities=19%  Similarity=0.162  Sum_probs=224.9

Q ss_pred             CCCCCCeEEEEEeeeccCcchHHhHhcCCCC-CCCCCcccc----cccEEEEEeCCCCCCCCCCCEEEeccccCCCCCCc
Q 018067           33 RATGEKDVTFKVTHCGICHSDLHMIKNEWGN-TIYPIVPGH----EIVGVVTEVGSKVSKFKVGDKVGVGCMVGSCRSCD  107 (361)
Q Consensus        33 p~~~~~evlV~v~~~~i~~~D~~~~~g~~~~-~~~p~~lG~----e~~G~Vv~vG~~v~~~~~GdrV~~~~~~~~c~~c~  107 (361)
                      .++++++||||.++.+..|-....++...+. ...|+.+|.    .++|+|++.  +.+++++||.|+.           
T Consensus        33 ~~~~s~~vlvknlYLS~DPymR~rM~~~~~~~y~~~~~~G~pi~g~GV~kVi~S--~~~~~~~GD~v~g-----------   99 (343)
T KOG1196|consen   33 VPLGSGEVLVKNLYLSCDPYMRIRMGKPDPSDYAPPYEPGKPIDGFGVAKVIDS--GHPNYKKGDLVWG-----------   99 (343)
T ss_pred             CCCCCccEEeEeeeecCCHHHHhhccCCCcccccCcccCCcEecCCceEEEEec--CCCCCCcCceEEE-----------
Confidence            4679999999999999988765544433332 233444443    678999994  5678999999972           


Q ss_pred             ccccCCCCCCcchhcccccccCCCCcCCCcceeEEeecCCc--eEECCC--CCCcccc-cccchhhhhhhhHhhhcCCCC
Q 018067          108 SCAIDLENYCPKVIMTYANKYHDGTITYGGYSDIMVADEHF--VVRIPE--GTPLDAT-APLLCAGITVYSPLRFYGLDK  182 (361)
Q Consensus       108 ~c~~~~~~~c~~~~~~~~~~~~~~~~~~g~~a~~v~v~~~~--~~~ip~--~~~~~~a-a~l~~~~~ta~~~l~~~~~~~  182 (361)
                                                 --+|.||..++.+.  .++++.  ++++... ..+..+.+|||..+.+....+
T Consensus       100 ---------------------------~~gWeeysii~~~~~~~~ki~~~~~~pLs~ylg~lGm~glTAy~Gf~ei~~pk  152 (343)
T KOG1196|consen  100 ---------------------------IVGWEEYSVITPNDLEHFKIQHPTDVPLSYYLGLLGMPGLTAYAGFYEICSPK  152 (343)
T ss_pred             ---------------------------eccceEEEEecCcchhcccCCCCCccCHhhhhhccCCchhHHHHHHHHhcCCC
Confidence                                       12699999887643  344444  5666664 477889999999999999999


Q ss_pred             CCCEEEEEcC-ChHHHHHHHHHHHcCCeEEEEeCCchhHHHHHHHcCCCEEecCCCH-HHHHHhc----CCccEEEEcCC
Q 018067          183 PGMHVGVVGL-GGLGHVAVKFAKAMGVKVTVISTSPSKKSEAIERLGADSFLVSRDQ-DEMQAAM----GTMDGIIDTVS  256 (361)
Q Consensus       183 ~g~~vlV~Ga-g~vG~~a~~la~~~g~~vi~~~~~~~~~~~~~~~~g~~~vv~~~~~-~~~~~~~----~g~d~vid~~g  256 (361)
                      .|++|+|-|| |++|+++.|+|+.+|++|+.++.++|+...+..+||.+..+||.++ +...++.    .|+|+.||++|
T Consensus       153 ~geTv~VSaAsGAvGql~GQ~Ak~~Gc~VVGsaGS~EKv~ll~~~~G~d~afNYK~e~~~~~aL~r~~P~GIDiYfeNVG  232 (343)
T KOG1196|consen  153 KGETVFVSAASGAVGQLVGQFAKLMGCYVVGSAGSKEKVDLLKTKFGFDDAFNYKEESDLSAALKRCFPEGIDIYFENVG  232 (343)
T ss_pred             CCCEEEEeeccchhHHHHHHHHHhcCCEEEEecCChhhhhhhHhccCCccceeccCccCHHHHHHHhCCCcceEEEeccC
Confidence            9999999987 9999999999999999999999999999888889999999999987 3333333    48999999999


Q ss_pred             CcccHHHHHhccccCCEEEEecCCCC-----Ccc-cChHHHHhCCcEEEecccCCH-----HHHHHHHHHHHcCCCceeE
Q 018067          257 AVHPLMPLIGLLKSQGKLVLVGAPEK-----PLE-LPAFSLLMGRKIVGGSMIGGM-----KETQEMIDFAAKHNIRADI  325 (361)
Q Consensus       257 ~~~~~~~~~~~l~~~G~~v~~g~~~~-----~~~-~~~~~~~~~~~~i~g~~~~~~-----~~~~~~~~ll~~~~~~~~~  325 (361)
                      +.. ++..+..|+..||++.+|+.+.     +.. .+....+.|+++|.|......     +-++.+..++++|+++...
T Consensus       233 G~~-lDavl~nM~~~gri~~CG~ISqYN~~~~~~~~~l~~ii~Kr~~iqgflv~d~~d~~~k~ld~l~~~ikegKI~y~e  311 (343)
T KOG1196|consen  233 GKM-LDAVLLNMNLHGRIAVCGMISQYNLENPEGLHNLSTIIYKRIRIQGFLVSDYLDKYPKFLDFLLPYIKEGKITYVE  311 (343)
T ss_pred             cHH-HHHHHHhhhhccceEeeeeehhccccCCccccchhhheeeeEEeeeEEeechhhhhHHHHHHHHHHHhcCceEEeh
Confidence            998 9999999999999999998652     111 233557789999999765443     3356777888999999877


Q ss_pred             E-EEecccHHHHHHHHHcCCCceEEEEEeCC
Q 018067          326 E-VIPADYVNTALERLAKADVRYRFVIDVAN  355 (361)
Q Consensus       326 ~-~~~l~~~~~a~~~~~~~~~~gkvvi~~~~  355 (361)
                      + .-.|+..+.||..|.+|++.||.++.+..
T Consensus       312 di~~Glen~P~A~vglf~GkNvGKqiv~va~  342 (343)
T KOG1196|consen  312 DIADGLENGPSALVGLFHGKNVGKQLVKVAR  342 (343)
T ss_pred             hHHHHHhccHHHHHHHhccCcccceEEEeec
Confidence            4 44699999999999999999999999875

>cd08255 2-desacetyl-2-hydroxyethyl_bacteriochlorophyllide_like 2-desacetyl-2-hydroxyethyl bacteriochlorophyllide and other MDR family members

Probab=99.96  E-value=7.2e-28  Score=218.06  Aligned_cols=242  Identities=28%  Similarity=0.390  Sum_probs=194.1

Q ss_pred             CCCCcccccccEEEEEeCCCCCCCCCCCEEEeccccCCCCCCcccccCCCCCCcchhcccccccCCCCcCCCcceeEEee
Q 018067           65 IYPIVPGHEIVGVVTEVGSKVSKFKVGDKVGVGCMVGSCRSCDSCAIDLENYCPKVIMTYANKYHDGTITYGGYSDIMVA  144 (361)
Q Consensus        65 ~~p~~lG~e~~G~Vv~vG~~v~~~~~GdrV~~~~~~~~c~~c~~c~~~~~~~c~~~~~~~~~~~~~~~~~~g~~a~~v~v  144 (361)
                      .+|.++|||++|+|+++|+++++|++||+|+.                                      .+.|++|+.+
T Consensus        19 ~~p~v~g~e~~G~V~~vG~~v~~~~~Gd~V~~--------------------------------------~~~~~~~~~v   60 (277)
T cd08255          19 PLPLPPGYSSVGRVVEVGSGVTGFKPGDRVFC--------------------------------------FGPHAERVVV   60 (277)
T ss_pred             cCCcccCcceeEEEEEeCCCCCCCCCCCEEEe--------------------------------------cCCcceEEEc
Confidence            47899999999999999999999999999973                                      2358999999


Q ss_pred             cCCceEECCCCCCcccccccchhhhhhhhHhhhcCCCCCCCEEEEEcCChHHHHHHHHHHHcCCe-EEEEeCCchhHHHH
Q 018067          145 DEHFVVRIPEGTPLDATAPLLCAGITVYSPLRFYGLDKPGMHVGVVGLGGLGHVAVKFAKAMGVK-VTVISTSPSKKSEA  223 (361)
Q Consensus       145 ~~~~~~~ip~~~~~~~aa~l~~~~~ta~~~l~~~~~~~~g~~vlV~Gag~vG~~a~~la~~~g~~-vi~~~~~~~~~~~~  223 (361)
                      +.+.++++|+++++.+++.+ +.+.+||+++. ..++++|++++|+|+|.+|++++++|+.+|++ |+++++++++.. +
T Consensus        61 ~~~~~~~ip~~l~~~~aa~~-~~~~ta~~~~~-~~~~~~g~~vlI~g~g~vg~~~i~~a~~~g~~~vi~~~~~~~~~~-~  137 (277)
T cd08255          61 PANLLVPLPDGLPPERAALT-ALAATALNGVR-DAEPRLGERVAVVGLGLVGLLAAQLAKAAGAREVVGVDPDAARRE-L  137 (277)
T ss_pred             CHHHeeECcCCCCHHHhHHH-HHHHHHHHHHH-hcCCCCCCEEEEECCCHHHHHHHHHHHHcCCCcEEEECCCHHHHH-H
Confidence            99999999999999998888 78999999986 56789999999998899999999999999998 988888877765 6


Q ss_pred             HHHcC-CCEEecCCCHHHHHHhcCCccEEEEcCCCcccHHHHHhccccCCEEEEecCCCCCcccChHHHHhCCcEEEecc
Q 018067          224 IERLG-ADSFLVSRDQDEMQAAMGTMDGIIDTVSAVHPLMPLIGLLKSQGKLVLVGAPEKPLELPAFSLLMGRKIVGGSM  302 (361)
Q Consensus       224 ~~~~g-~~~vv~~~~~~~~~~~~~g~d~vid~~g~~~~~~~~~~~l~~~G~~v~~g~~~~~~~~~~~~~~~~~~~i~g~~  302 (361)
                      ++++| ++.+++..+..   .-..++|++||+++....+...+++++++|+++.+|..+.........+..+.+++.+..
T Consensus       138 ~~~~g~~~~~~~~~~~~---~~~~~~d~vl~~~~~~~~~~~~~~~l~~~g~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~  214 (277)
T cd08255         138 AEALGPADPVAADTADE---IGGRGADVVIEASGSPSALETALRLLRDRGRVVLVGWYGLKPLLLGEEFHFKRLPIRSSQ  214 (277)
T ss_pred             HHHcCCCccccccchhh---hcCCCCCEEEEccCChHHHHHHHHHhcCCcEEEEEeccCCCccccHHHHHhccCeEEeec
Confidence            68888 55555443211   112379999999987666889999999999999998765432122233444666666654


Q ss_pred             cCC------------HHHHHHHHHHHHcCCCceeE-EEEecccHHHHHHHHHcCC-CceEEE
Q 018067          303 IGG------------MKETQEMIDFAAKHNIRADI-EVIPADYVNTALERLAKAD-VRYRFV  350 (361)
Q Consensus       303 ~~~------------~~~~~~~~~ll~~~~~~~~~-~~~~l~~~~~a~~~~~~~~-~~gkvv  350 (361)
                      ...            .+.++++++++.++++++.+ +.++++++++||+.+++++ ...|++
T Consensus       215 ~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~l~~~~~~~~~~~~~~~a~~~~~~~~~~~~k~~  276 (277)
T cd08255         215 VYGIGRYDRPRRWTEARNLEEALDLLAEGRLEALITHRVPFEDAPEAYRLLFEDPPECLKVV  276 (277)
T ss_pred             ccccccccccccccccccHHHHHHHHHcCCccccccCccCHHHHHHHHHHHHcCCccceeee
Confidence            321            25688999999999988655 8999999999999998773 236765

This subgroup of the medium chain dehydrogenases/reductase (MDR)/zinc-dependent alcohol dehydrogenase-like family has members identified as 2-desacetyl-2-hydroxyethyl bacteriochlorophyllide A dehydrogenase and alcohol dehydrogenases. The medium chain dehydrogenases/reductase (MDR)/zinc-dependent alcohol dehydrogenase-like family, which contains the zinc-dependent alcohol dehydrogenase (ADH-Zn) and related proteins, is a diverse group of proteins related to the first identified member, class I mammalian ADH. MDRs display a broad range of activities and are distinguished from the smaller short chain dehydrogenases (~ 250 amino acids vs. the ~ 350 amino acids of the MDR). The MDR proteins have 2 domains: a C-terminal NAD(P) binding-Rossmann fold domain of a beta-alpha form and an N-terminal catalytic domain with distant homology to GroES. The MD

>KOG1202 consensus Animal-type fatty acid synthase and related proteins [Lipid transport and metabolism]

Probab=99.95  E-value=1.3e-27  Score=234.37  Aligned_cols=288  Identities=19%  Similarity=0.217  Sum_probs=236.6

Q ss_pred             CCCccceeeccC---CCCCCeEEEEEeeeccCcchHHhHhcCCCCCCCC-------CcccccccEEEEEeCCCCCCCCCC
Q 018067           22 SGVLSPFHFSRR---ATGEKDVTFKVTHCGICHSDLHMIKNEWGNTIYP-------IVPGHEIVGVVTEVGSKVSKFKVG   91 (361)
Q Consensus        22 ~~~l~~~~~~~p---~~~~~evlV~v~~~~i~~~D~~~~~g~~~~~~~p-------~~lG~e~~G~Vv~vG~~v~~~~~G   91 (361)
                      -..+++.+-|..   +..++.=+--|-|+.||..|+....|..+....|       +.||.|++|+          .+-|
T Consensus      1426 lsSlrWies~~~~a~~~~~~~e~CtVYYAplNFRDiMLasGkL~~DAiPG~~a~qdclLGmEFsGR----------d~~G 1495 (2376)
T KOG1202|consen 1426 LSSLRWIESPLRHAQPTCPGLELCTVYYAPLNFRDIMLASGKLSPDAIPGDLASQDCLLGMEFSGR----------DASG 1495 (2376)
T ss_pred             ccceeeeecchhhcCCCCCCCceeEEEeccccHHHHHHhcCCCCcccCCCccchhhheeceeeccc----------cCCC
Confidence            344555554443   4567777899999999999999999988765555       5899999998          3459


Q ss_pred             CEEEeccccCCCCCCcccccCCCCCCcchhcccccccCCCCcCCCcceeEEeecCCceEECCCCCCcccccccchhhhhh
Q 018067           92 DKVGVGCMVGSCRSCDSCAIDLENYCPKVIMTYANKYHDGTITYGGYSDIMVADEHFVVRIPEGTPLDATAPLLCAGITV  171 (361)
Q Consensus        92 drV~~~~~~~~c~~c~~c~~~~~~~c~~~~~~~~~~~~~~~~~~g~~a~~v~v~~~~~~~ip~~~~~~~aa~l~~~~~ta  171 (361)
                      .||+.                                   ....-++++.+.++.+++|.+|+...+++|+++||.+.||
T Consensus      1496 rRvM~-----------------------------------mvpAksLATt~l~~rd~lWevP~~WTleeAstVP~VYsTa 1540 (2376)
T KOG1202|consen 1496 RRVMG-----------------------------------MVPAKSLATTVLASRDFLWEVPSKWTLEEASTVPVVYSTA 1540 (2376)
T ss_pred             cEEEE-----------------------------------eeehhhhhhhhhcchhhhhhCCcccchhhcccCceEeeee
Confidence            99984                                   3456778999999999999999999999999999999999


Q ss_pred             hhHhhhcCCCCCCCEEEEEc-CChHHHHHHHHHHHcCCeEEEEeCCchhHHHHHHHcCC---CEEecCCCHH---HHHHh
Q 018067          172 YSPLRFYGLDKPGMHVGVVG-LGGLGHVAVKFAKAMGVKVTVISTSPSKKSEAIERLGA---DSFLVSRDQD---EMQAA  244 (361)
Q Consensus       172 ~~~l~~~~~~~~g~~vlV~G-ag~vG~~a~~la~~~g~~vi~~~~~~~~~~~~~~~~g~---~~vv~~~~~~---~~~~~  244 (361)
                      |++|...+..++|+++||++ +|++|++||.+|.+.|++|+.++.+.++|+.+.+.|.-   .++-|+++.+   .+.+-
T Consensus      1541 YYALVvRG~mkkGekiLIHaGsGGVGQAAIaiALa~G~~VFTTVGSaEKRefL~~rFPqLqe~~~~NSRdtsFEq~vl~~ 1620 (2376)
T KOG1202|consen 1541 YYALVVRGQMKKGEKILIHAGSGGVGQAAIAIALAHGCTVFTTVGSAEKREFLLKRFPQLQETNFANSRDTSFEQHVLWH 1620 (2376)
T ss_pred             hhhhhhhccccCCcEEEEecCCCchhHHHHHHHHHcCCEEEEecCcHHHHHHHHHhchhhhhhcccccccccHHHHHHHH
Confidence            99999999999999999985 59999999999999999999999999999999888872   4555666533   33333


Q ss_pred             c--CCccEEEEcCCCcccHHHHHhccccCCEEEEecCCCC--CcccChHHHHhCCcEEEeccc-----CCHHHHHHHHHH
Q 018067          245 M--GTMDGIIDTVSAVHPLMPLIGLLKSQGKLVLVGAPEK--PLELPAFSLLMGRKIVGGSMI-----GGMKETQEMIDF  315 (361)
Q Consensus       245 ~--~g~d~vid~~g~~~~~~~~~~~l~~~G~~v~~g~~~~--~~~~~~~~~~~~~~~i~g~~~-----~~~~~~~~~~~l  315 (361)
                      +  .|+|+|+|+...+. ++..++||+.+||+..+|-.+-  ...+.+ ..+.||.+++|...     +..+++.++..+
T Consensus      1621 T~GrGVdlVLNSLaeEk-LQASiRCLa~~GRFLEIGKfDLSqNspLGM-avfLkNvsfHGiLLDsvmege~e~~~ev~~L 1698 (2376)
T KOG1202|consen 1621 TKGRGVDLVLNSLAEEK-LQASIRCLALHGRFLEIGKFDLSQNSPLGM-AVFLKNVSFHGILLDSVMEGEEEMWREVAAL 1698 (2376)
T ss_pred             hcCCCeeeehhhhhHHH-HHHHHHHHHhcCeeeeecceecccCCcchh-hhhhcccceeeeehhhhhcCcHHHHHHHHHH
Confidence            3  28999999999998 9999999999999999996542  223333 34569999999765     345677888877


Q ss_pred             HHcC----CCceeE-EEEecccHHHHHHHHHcCCCceEEEEEeCCc
Q 018067          316 AAKH----NIRADI-EVIPADYVNTALERLAKADVRYRFVIDVANT  356 (361)
Q Consensus       316 l~~~----~~~~~~-~~~~l~~~~~a~~~~~~~~~~gkvvi~~~~~  356 (361)
                      +++|    ..+|.. ++|+-+++++||+.|.+|+..||+|+++-.+
T Consensus      1699 v~eGIksGvV~PL~ttvF~~~qvE~AFRfMasGKHIGKVvikvr~e 1744 (2376)
T KOG1202|consen 1699 VAEGIKSGVVRPLPTTVFHGQQVEDAFRFMASGKHIGKVVIKVRAE 1744 (2376)
T ss_pred             HHhhhccCceeccccccccHHHHHHHHHHHhccCccceEEEEEccc
Confidence            7765    456655 8999999999999999999999999998755

>PF08240 ADH_N: Alcohol dehydrogenase GroES-like domain; InterPro: IPR013154 This is the catalytic domain of alcohol dehydrogenases (1

Probab=99.91  E-value=2.3e-24  Score=166.91  Aligned_cols=108  Identities=36%  Similarity=0.629  Sum_probs=94.1

Q ss_pred             CCeEEEEEeeeccCcchHHhHhc-CCCCCCCCCcccccccEEEEEeCCCCCCCCCCCEEEeccccCCCCCCcccccCCCC
Q 018067           37 EKDVTFKVTHCGICHSDLHMIKN-EWGNTIYPIVPGHEIVGVVTEVGSKVSKFKVGDKVGVGCMVGSCRSCDSCAIDLEN  115 (361)
Q Consensus        37 ~~evlV~v~~~~i~~~D~~~~~g-~~~~~~~p~~lG~e~~G~Vv~vG~~v~~~~~GdrV~~~~~~~~c~~c~~c~~~~~~  115 (361)
                      |+||||||+++|||++|++.++| ......+|.++|||++|+|+++|+++++|++||||++.+.. .|+.|.+|..+.++
T Consensus         1 P~eVlVkv~a~gic~~D~~~~~g~~~~~~~~p~i~GhE~~G~V~~vG~~v~~~~~Gd~V~~~~~~-~~~~c~~c~~~~~~   79 (109)
T PF08240_consen    1 PGEVLVKVRAAGICGSDLHIREGGPPPPPKFPLILGHEGVGVVVAVGPGVTDFKVGDRVVVSPNI-GCGECEYCLSGRPN   79 (109)
T ss_dssp             TTEEEEEEEEEEE-HHHHHHHTTSSSSTSSSSEES-SEEEEEEEEESTTTTSSGTT-EEEEESEE-ETSSSHHHHTTTGG
T ss_pred             CCEEEEEEEEeeeCHHHHHHHhhccccCCCCCcccccceeeeeeeeccccccccccceeeeeccc-CccCchhhcCCccc
Confidence            78999999999999999999998 34556889999999999999999999999999999987766 59999999999999


Q ss_pred             CCcchhcccccccCCCCcCCCcceeEEeecCCceEEC
Q 018067          116 YCPKVIMTYANKYHDGTITYGGYSDIMVADEHFVVRI  152 (361)
Q Consensus       116 ~c~~~~~~~~~~~~~~~~~~g~~a~~v~v~~~~~~~i  152 (361)
                      .|++....       +...+|+|+||+.++.+++++|
T Consensus        80 ~c~~~~~~-------g~~~~G~~aey~~v~~~~~~~v  109 (109)
T PF08240_consen   80 LCPNPEVL-------GLGLDGGFAEYVVVPARNLVPV  109 (109)
T ss_dssp             GTTTBEET-------TTSSTCSSBSEEEEEGGGEEEE
T ss_pred             cCCCCCEe-------EcCCCCcccCeEEEehHHEEEC
Confidence            99876443       4558999999999999999875

1.1.1 from EC). Many of them contain an inserted zinc binding domain. This domain has a GroES-like structure; a name derived from the superfamily of proteins with a GroES fold. Proteins with a GroES fold structure have a highly conserved hydrophobic core and a glycyl-aspartate dipeptide which is thought to maintain the fold [, ].; GO: 0016491 oxidoreductase activity, 0055114 oxidation-reduction process; PDB: 1YKF_D 2NVB_A 3FSR_D 1BXZ_B 3FTN_A 3MEQ_D 3UOG_B 3HZZ_B 4DVJ_A 1P0F_A ....

>PF00107 ADH_zinc_N: Zinc-binding dehydrogenase; InterPro: IPR013149 Alcohol dehydrogenase (1

Probab=99.72  E-value=6.1e-17  Score=129.42  Aligned_cols=123  Identities=32%  Similarity=0.498  Sum_probs=109.2

Q ss_pred             hHHHHHHHHHHHcCCeEEEEeCCchhHHHHHHHcCCCEEecCCCHH---HHHHhcC--CccEEEEcCCCcccHHHHHhcc
Q 018067          194 GLGHVAVKFAKAMGVKVTVISTSPSKKSEAIERLGADSFLVSRDQD---EMQAAMG--TMDGIIDTVSAVHPLMPLIGLL  268 (361)
Q Consensus       194 ~vG~~a~~la~~~g~~vi~~~~~~~~~~~~~~~~g~~~vv~~~~~~---~~~~~~~--g~d~vid~~g~~~~~~~~~~~l  268 (361)
                      ++|++++|+|+++|++|+++++++++++ +++++|+++++++++.+   .++++++  ++|+||||+|++..++.+++++
T Consensus         1 ~vG~~a~q~ak~~G~~vi~~~~~~~k~~-~~~~~Ga~~~~~~~~~~~~~~i~~~~~~~~~d~vid~~g~~~~~~~~~~~l   79 (130)
T PF00107_consen    1 GVGLMAIQLAKAMGAKVIATDRSEEKLE-LAKELGADHVIDYSDDDFVEQIRELTGGRGVDVVIDCVGSGDTLQEAIKLL   79 (130)
T ss_dssp             HHHHHHHHHHHHTTSEEEEEESSHHHHH-HHHHTTESEEEETTTSSHHHHHHHHTTTSSEEEEEESSSSHHHHHHHHHHE
T ss_pred             ChHHHHHHHHHHcCCEEEEEECCHHHHH-HHHhhcccccccccccccccccccccccccceEEEEecCcHHHHHHHHHHh
Confidence            5899999999999999999999887764 45899999999998864   4555554  6999999999777799999999


Q ss_pred             ccCCEEEEecCCC-CCcccChHHHHhCCcEEEecccCCHHHHHHHHHHHH
Q 018067          269 KSQGKLVLVGAPE-KPLELPAFSLLMGRKIVGGSMIGGMKETQEMIDFAA  317 (361)
Q Consensus       269 ~~~G~~v~~g~~~-~~~~~~~~~~~~~~~~i~g~~~~~~~~~~~~~~ll~  317 (361)
                      +++|+++.+|... ....++...++.+++++.|++.++.++++++++++.
T Consensus        80 ~~~G~~v~vg~~~~~~~~~~~~~~~~~~~~i~g~~~~~~~~~~~~~~~la  129 (130)
T PF00107_consen   80 RPGGRIVVVGVYGGDPISFNLMNLMFKEITIRGSWGGSPEDFQEALQLLA  129 (130)
T ss_dssp             EEEEEEEEESSTSTSEEEEEHHHHHHTTEEEEEESSGGHHHHHHHHHHHH
T ss_pred             ccCCEEEEEEccCCCCCCCCHHHHHhCCcEEEEEccCCHHHHHHHHHHhc
Confidence            9999999999987 667899999999999999999999999999999876

1.1.1 from EC) (ADH) catalyzes the reversible oxidation of alcohols to their corresponding acetaldehyde or ketone with the concomitant reduction of NAD: alcohol + NAD = aldehyde or ketone + NADH Currently three structurally and catalytically different types of alcohol dehydrogenases are known: Zinc-containing 'long-chain' alcohol dehydrogenases. Insect-type, or 'short-chain' alcohol dehydrogenases. Iron-containing alcohol dehydrogenases. Zinc-containing ADH's [, ] are dimeric or tetrameric enzymes that bind two atoms of zinc per subunit. One of the zinc atom is essential for catalytic activity while the other is not. Both zinc atoms are coordinated by either cysteine or histidine residues; the catalytic zinc is coordinated by two cysteines and one histidine. Zinc-containing ADH's are found in bacteria, mammals, plants, and in fungi. In many species there is more than one isozyme (for example, humans have at least six isozymes, yeast have three, etc.). A number of other zinc-dependent dehydrogenases are closely related to zinc ADH [] and are included in this family. Sorbitol dehydrogenase (1.1.1.14 from EC) L-threonine 3-dehydrogenase (1.1.1.103 from EC) Glutathione-dependent formaldehyde dehydrogenase (1.1.1.284 from EC) Mannitol dehydrogenase (1.1.1.255 from EC) In addition, this family includes NADP-dependent quinone oxidoreductase (1.6.5.5 from EC), an enzyme found in bacteria (gene qor), in yeast and in mammals where, in some species such as rodents, it has been recruited as an eye lens protein and is known as zeta-crystallin []. The sequence of quinone oxidoreductase is distantly related to that other zinc-containing alcohol dehydrogenases and it lacks the zinc-ligand residues. The torpedo fish and mammalian synaptic vesicle membrane protein vat-1 is related to qor. This entry represents the cofactor-binding domain of these enzymes, which is normally found towards the C terminus. Structural studies indicate that it forms a classical Rossman fold that reversibly binds NAD(H) [, , ].; GO: 0008270 zinc ion binding, 0016491 oxidoreductase activity, 0055114 oxidation-reduction process; PDB: 3PI7_A 3COS_D 1VJ1_A 2ZB3_A 1PIW_B 1Q1N_A 1PS0_A 2EER_B 3KRT_A 1ZSY_A ....

>cd00401 AdoHcyase S-adenosyl-L-homocysteine hydrolase (AdoHycase) catalyzes the hydrolysis of S-adenosyl-L-homocysteine (AdoHyc) to form adenosine (Ado) and homocysteine (Hcy)

Probab=99.53  E-value=1.6e-13  Score=128.53  Aligned_cols=174  Identities=14%  Similarity=0.061  Sum_probs=135.5

Q ss_pred             hhhHhhhc-CCCCCCCEEEEEcCChHHHHHHHHHHHcCCeEEEEeCCchhHHHHHHHcCCCEEecCCCHHHHHHhcCCcc
Q 018067          171 VYSPLRFY-GLDKPGMHVGVVGLGGLGHVAVKFAKAMGVKVTVISTSPSKKSEAIERLGADSFLVSRDQDEMQAAMGTMD  249 (361)
Q Consensus       171 a~~~l~~~-~~~~~g~~vlV~Gag~vG~~a~~la~~~g~~vi~~~~~~~~~~~~~~~~g~~~vv~~~~~~~~~~~~~g~d  249 (361)
                      .|.++.+. ....+|++|+|+|+|.+|+.+++.++.+|++|++++.++.+.. .++.+|++.+ +.      .+...++|
T Consensus       188 ~~~~i~r~t~~~l~GktVvViG~G~IG~~va~~ak~~Ga~ViV~d~d~~R~~-~A~~~G~~~~-~~------~e~v~~aD  259 (413)
T cd00401         188 LIDGIKRATDVMIAGKVAVVAGYGDVGKGCAQSLRGQGARVIVTEVDPICAL-QAAMEGYEVM-TM------EEAVKEGD  259 (413)
T ss_pred             hHHHHHHhcCCCCCCCEEEEECCCHHHHHHHHHHHHCCCEEEEEECChhhHH-HHHhcCCEEc-cH------HHHHcCCC
Confidence            35555443 3346899999999999999999999999999999888776654 4478898543 21      12335789


Q ss_pred             EEEEcCCCcccHHHH-HhccccCCEEEEecCCCCCcccChHHHHhCCcEEEecccCCHH-HHH--HHHHHHHcCCC-cee
Q 018067          250 GIIDTVSAVHPLMPL-IGLLKSQGKLVLVGAPEKPLELPAFSLLMGRKIVGGSMIGGMK-ETQ--EMIDFAAKHNI-RAD  324 (361)
Q Consensus       250 ~vid~~g~~~~~~~~-~~~l~~~G~~v~~g~~~~~~~~~~~~~~~~~~~i~g~~~~~~~-~~~--~~~~ll~~~~~-~~~  324 (361)
                      +||+++|....+... ++.++++|+++.+|..  ...++...+..+++++.+++.+..+ +++  +.++++.+|++ +..
T Consensus       260 VVI~atG~~~~i~~~~l~~mk~GgilvnvG~~--~~eId~~~L~~~el~i~g~~~~~~~~~~~~g~aI~LLa~Grlvnl~  337 (413)
T cd00401         260 IFVTTTGNKDIITGEHFEQMKDGAIVCNIGHF--DVEIDVKGLKENAVEVVNIKPQVDRYELPDGRRIILLAEGRLVNLG  337 (413)
T ss_pred             EEEECCCCHHHHHHHHHhcCCCCcEEEEeCCC--CCccCHHHHHhhccEEEEccCCcceEEcCCcchhhhhhCcCCCCCc
Confidence            999999998878776 9999999999999964  4567888888899999999887544 455  79999999988 432


Q ss_pred             --E-EE-----Eecc-cHHHHHHHHHcCCCc-eEEEEEeC
Q 018067          325 --I-EV-----IPAD-YVNTALERLAKADVR-YRFVIDVA  354 (361)
Q Consensus       325 --~-~~-----~~l~-~~~~a~~~~~~~~~~-gkvvi~~~  354 (361)
                        + |.     ++|+ |+.+++..+.++... .|+++.+.
T Consensus       338 ~~~gH~~~vmd~sf~~q~l~a~~l~~~~~~~~~kV~~~p~  377 (413)
T cd00401         338 CATGHPSFVMSNSFTNQVLAQIELWTNRDKYEVGVYFLPK  377 (413)
T ss_pred             ccCCCccceechhHHHHHHHHHHHHhcCCcCCCcEEECCH
Confidence              3 66     8899 999999999887643 57766654

The equilibrium lies far on the side of AdoHyc synthesis, but in nature the removal of Ado and Hyc is sufficiently fast, so that the net reaction is in the direction of hydrolysis. Since AdoHyc is a potent inhibitor of S-adenosyl-L-methionine dependent methyltransferases, AdoHycase plays a critical role in the modulation of the activity of various methyltransferases. The enzyme forms homooligomers of 45-50kDa subunits, each binding one molecule of NAD+.

>PF13602 ADH_zinc_N_2: Zinc-binding dehydrogenase; PDB: 3TQH_A 2VN8_A 3GOH_A 4A27_A

Probab=99.50  E-value=3.3e-14  Score=113.04  Aligned_cols=117  Identities=29%  Similarity=0.396  Sum_probs=79.0

Q ss_pred             cCCCEEecCCCHHHHHHhcCCccEEEEcCC--CcccHHHHHhccccCCEEEEecCCCCCcccChHHHHhCC--cEEEecc
Q 018067          227 LGADSFLVSRDQDEMQAAMGTMDGIIDTVS--AVHPLMPLIGLLKSQGKLVLVGAPEKPLELPAFSLLMGR--KIVGGSM  302 (361)
Q Consensus       227 ~g~~~vv~~~~~~~~~~~~~g~d~vid~~g--~~~~~~~~~~~l~~~G~~v~~g~~~~~~~~~~~~~~~~~--~~i~g~~  302 (361)
                      +|+++++|+++.+.  ...+++|+|||++|  .+..+..++++| ++|+++.++.     .........+.  .+.....
T Consensus         1 LGAd~vidy~~~~~--~~~~~~D~ViD~~g~~~~~~~~~~~~~l-~~G~~v~i~~-----~~~~~~~~~~~~~~~~~~~~   72 (127)
T PF13602_consen    1 LGADEVIDYRDTDF--AGPGGVDVVIDTVGQTGESLLDASRKLL-PGGRVVSIGG-----DLPSFARRLKGRSIRYSFLF   72 (127)
T ss_dssp             CT-SEEEETTCSHH--HTTS-EEEEEESS-CCHHHCGGGCCCTE-EEEEEEEE-S-----HHHHHHHHHHCHHCEEECCC
T ss_pred             CCcCEEecCCCccc--cCCCCceEEEECCCCccHHHHHHHHHHC-CCCEEEEECC-----cccchhhhhcccceEEEEEE
Confidence            68999999997666  33468999999999  665456777888 9999999984     11111111122  2222222


Q ss_pred             c-C----CHHHHHHHHHHHHcCCCceeE-EEEecccHHHHHHHHHcCCCceEEEE
Q 018067          303 I-G----GMKETQEMIDFAAKHNIRADI-EVIPADYVNTALERLAKADVRYRFVI  351 (361)
Q Consensus       303 ~-~----~~~~~~~~~~ll~~~~~~~~~-~~~~l~~~~~a~~~~~~~~~~gkvvi  351 (361)
                      . .    ..+.++++.+++++|++++.+ ++|||+++++|++.+++++..||+|+
T Consensus        73 ~~~~~~~~~~~l~~l~~l~~~G~l~~~i~~~f~l~~~~~A~~~l~~~~~~GKvVl  127 (127)
T PF13602_consen   73 SVDPNAIRAEALEELAELVAEGKLKPPIDRVFPLEEAPEAHERLESGHARGKVVL  127 (127)
T ss_dssp             -H--HHHHHHHHHHHHHHHHTTSS---EEEEEEGGGHHHHHHHHHCT--SSEEEE
T ss_pred             ecCCCchHHHHHHHHHHHHHCCCeEEeeccEECHHHHHHHHHHHHhCCCCCeEeC
Confidence            1 1    234599999999999999999 69999999999999999999999986

>PRK09424 pntA NAD(P) transhydrogenase subunit alpha; Provisional

Probab=99.40  E-value=7.6e-12  Score=120.22  Aligned_cols=142  Identities=19%  Similarity=0.204  Sum_probs=108.3

Q ss_pred             CCCCEEEEEcCChHHHHHHHHHHHcCCeEEEEeCCchhHHHHHHHcCCCEE-ecCCCH-------------HHHH---H-
Q 018067          182 KPGMHVGVVGLGGLGHVAVKFAKAMGVKVTVISTSPSKKSEAIERLGADSF-LVSRDQ-------------DEMQ---A-  243 (361)
Q Consensus       182 ~~g~~vlV~Gag~vG~~a~~la~~~g~~vi~~~~~~~~~~~~~~~~g~~~v-v~~~~~-------------~~~~---~-  243 (361)
                      .++++|+|+|+|++|+++++.|+.+|++|++++.++++++.+ +++|++.+ ++..+.             +..+   + 
T Consensus       163 ~pg~kVlViGaG~iGL~Ai~~Ak~lGA~V~a~D~~~~rle~a-eslGA~~v~i~~~e~~~~~~gya~~~s~~~~~~~~~~  241 (509)
T PRK09424        163 VPPAKVLVIGAGVAGLAAIGAAGSLGAIVRAFDTRPEVAEQV-ESMGAEFLELDFEEEGGSGDGYAKVMSEEFIKAEMAL  241 (509)
T ss_pred             cCCCEEEEECCcHHHHHHHHHHHHCCCEEEEEeCCHHHHHHH-HHcCCeEEEeccccccccccchhhhcchhHHHHHHHH
Confidence            579999999999999999999999999999999888776544 88999843 554321             1111   1 


Q ss_pred             hc---CCccEEEEcCCCc-----ccH-HHHHhccccCCEEEEecCC-CCC--cccChHHHHh-CCcEEEecccCCHHHHH
Q 018067          244 AM---GTMDGIIDTVSAV-----HPL-MPLIGLLKSQGKLVLVGAP-EKP--LELPAFSLLM-GRKIVGGSMIGGMKETQ  310 (361)
Q Consensus       244 ~~---~g~d~vid~~g~~-----~~~-~~~~~~l~~~G~~v~~g~~-~~~--~~~~~~~~~~-~~~~i~g~~~~~~~~~~  310 (361)
                      +.   .++|++|+|+|.+     ..+ +.+++.++++|+++++|.. ++.  ...+...++. +++++.|+.....+...
T Consensus       242 ~~~~~~gaDVVIetag~pg~~aP~lit~~~v~~mkpGgvIVdvg~~~GG~~e~t~~~~~v~~~~gVti~Gv~n~P~~~p~  321 (509)
T PRK09424        242 FAEQAKEVDIIITTALIPGKPAPKLITAEMVASMKPGSVIVDLAAENGGNCELTVPGEVVVTDNGVTIIGYTDLPSRLPT  321 (509)
T ss_pred             HHhccCCCCEEEECCCCCcccCcchHHHHHHHhcCCCCEEEEEccCCCCCcccccCccceEeECCEEEEEeCCCchhHHH
Confidence            12   4799999999963     343 8999999999999999985 343  3444445565 89999998877765555


Q ss_pred             HHHHHHHcCCCcee
Q 018067          311 EMIDFAAKHNIRAD  324 (361)
Q Consensus       311 ~~~~ll~~~~~~~~  324 (361)
                      ++.+++.++.++..
T Consensus       322 ~As~lla~~~i~l~  335 (509)
T PRK09424        322 QSSQLYGTNLVNLL  335 (509)
T ss_pred             HHHHHHHhCCccHH
Confidence            69999999887643

>PRK05476 S-adenosyl-L-homocysteine hydrolase; Provisional

Probab=98.66  E-value=5e-07  Score=85.37  Aligned_cols=111  Identities=17%  Similarity=0.221  Sum_probs=83.8

Q ss_pred             hhhhhhHhhhcCCCC-CCCEEEEEcCChHHHHHHHHHHHcCCeEEEEeCCchhHHHHHHHcCCCEEecCCCHHHHHHhcC
Q 018067          168 GITVYSPLRFYGLDK-PGMHVGVVGLGGLGHVAVKFAKAMGVKVTVISTSPSKKSEAIERLGADSFLVSRDQDEMQAAMG  246 (361)
Q Consensus       168 ~~ta~~~l~~~~~~~-~g~~vlV~Gag~vG~~a~~la~~~g~~vi~~~~~~~~~~~~~~~~g~~~vv~~~~~~~~~~~~~  246 (361)
                      ...+|.++.+...+. .|++|+|+|.|.+|..+++.++.+|++|++++.++.+.... ...|+. +.+      +.++..
T Consensus       195 ~~s~~~ai~rat~~~l~Gk~VlViG~G~IG~~vA~~lr~~Ga~ViV~d~dp~ra~~A-~~~G~~-v~~------l~eal~  266 (425)
T PRK05476        195 GESLLDGIKRATNVLIAGKVVVVAGYGDVGKGCAQRLRGLGARVIVTEVDPICALQA-AMDGFR-VMT------MEEAAE  266 (425)
T ss_pred             HhhhHHHHHHhccCCCCCCEEEEECCCHHHHHHHHHHHhCCCEEEEEcCCchhhHHH-HhcCCE-ecC------HHHHHh
Confidence            344577766663444 89999999999999999999999999999998887665444 345654 221      223345


Q ss_pred             CccEEEEcCCCcccHH-HHHhccccCCEEEEecCCCCCccc
Q 018067          247 TMDGIIDTVSAVHPLM-PLIGLLKSQGKLVLVGAPEKPLEL  286 (361)
Q Consensus       247 g~d~vid~~g~~~~~~-~~~~~l~~~G~~v~~g~~~~~~~~  286 (361)
                      ++|++|+++|....+. ..+..+++++.++.+|.....+.+
T Consensus       267 ~aDVVI~aTG~~~vI~~~~~~~mK~GailiNvG~~d~Eid~  307 (425)
T PRK05476        267 LGDIFVTATGNKDVITAEHMEAMKDGAILANIGHFDNEIDV  307 (425)
T ss_pred             CCCEEEECCCCHHHHHHHHHhcCCCCCEEEEcCCCCCccCh
Confidence            8999999999877565 678899999999999986544433

>PRK11873 arsM arsenite S-adenosylmethyltransferase; Reviewed

Probab=98.64  E-value=3.1e-07  Score=82.89  Aligned_cols=168  Identities=19%  Similarity=0.235  Sum_probs=99.9

Q ss_pred             CCCCCCCEEEEEcCChHHHHHHHHHHHcCC--eEEEEeCCchhHHHHHH---HcCCCEE-ecCCCHHHHHHhcCCccEEE
Q 018067          179 GLDKPGMHVGVVGLGGLGHVAVKFAKAMGV--KVTVISTSPSKKSEAIE---RLGADSF-LVSRDQDEMQAAMGTMDGII  252 (361)
Q Consensus       179 ~~~~~g~~vlV~Gag~vG~~a~~la~~~g~--~vi~~~~~~~~~~~~~~---~~g~~~v-v~~~~~~~~~~~~~g~d~vi  252 (361)
                      ..+++|++||.+|+|. |..+.++++..|.  +|+.++.+++..+.+.+   .++.+.+ +...+.+.+....+.+|+|+
T Consensus        73 ~~~~~g~~VLDiG~G~-G~~~~~~a~~~g~~~~v~gvD~s~~~l~~A~~~~~~~g~~~v~~~~~d~~~l~~~~~~fD~Vi  151 (272)
T PRK11873         73 AELKPGETVLDLGSGG-GFDCFLAARRVGPTGKVIGVDMTPEMLAKARANARKAGYTNVEFRLGEIEALPVADNSVDVII  151 (272)
T ss_pred             ccCCCCCEEEEeCCCC-CHHHHHHHHHhCCCCEEEEECCCHHHHHHHHHHHHHcCCCCEEEEEcchhhCCCCCCceeEEE
Confidence            4478999999999988 8888888888765  69999888776555432   2343221 11111111111123699998


Q ss_pred             EcC------CCcccHHHHHhccccCCEEEEecCCCCCcccChHHHHhCCcEEEecccCCHHHHHHHHHHHHcCCCce-eE
Q 018067          253 DTV------SAVHPLMPLIGLLKSQGKLVLVGAPEKPLELPAFSLLMGRKIVGGSMIGGMKETQEMIDFAAKHNIRA-DI  325 (361)
Q Consensus       253 d~~------g~~~~~~~~~~~l~~~G~~v~~g~~~~~~~~~~~~~~~~~~~i~g~~~~~~~~~~~~~~ll~~~~~~~-~~  325 (361)
                      ...      .....+..+++.|+++|+++..+..... .++  ..+.+...+.+.........+++.+++++..+.. .+
T Consensus       152 ~~~v~~~~~d~~~~l~~~~r~LkpGG~l~i~~~~~~~-~~~--~~~~~~~~~~~~~~~~~~~~~e~~~~l~~aGf~~v~i  228 (272)
T PRK11873        152 SNCVINLSPDKERVFKEAFRVLKPGGRFAISDVVLRG-ELP--EEIRNDAELYAGCVAGALQEEEYLAMLAEAGFVDITI  228 (272)
T ss_pred             EcCcccCCCCHHHHHHHHHHHcCCCcEEEEEEeeccC-CCC--HHHHHhHHHHhccccCCCCHHHHHHHHHHCCCCceEE
Confidence            543      2234588999999999999987654322 111  1112222222222222223456667777754443 22


Q ss_pred             ---EEEecccHHHHHHHH--HcCCCceEEE
Q 018067          326 ---EVIPADYVNTALERL--AKADVRYRFV  350 (361)
Q Consensus       326 ---~~~~l~~~~~a~~~~--~~~~~~gkvv  350 (361)
                         +.++++++.++++.+  ..++..++.+
T Consensus       229 ~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~  258 (272)
T PRK11873        229 QPKREYRIPDAREFLEDWGIAPGRQLDGYI  258 (272)
T ss_pred             EeccceecccHHHHHHHhccccccccCceE
Confidence               578899999999988  5544444443

>TIGR01035 hemA glutamyl-tRNA reductase

Probab=98.63  E-value=2.3e-09  Score=102.14  Aligned_cols=160  Identities=16%  Similarity=0.254  Sum_probs=110.6

Q ss_pred             cccccccEEEEEeCCCCCCCCCCCEEEeccccCCCCCCcccccCCCCCCcchhcccccccCCCCcCCCcceeEEeecCCc
Q 018067           69 VPGHEIVGVVTEVGSKVSKFKVGDKVGVGCMVGSCRSCDSCAIDLENYCPKVIMTYANKYHDGTITYGGYSDIMVADEHF  148 (361)
Q Consensus        69 ~lG~e~~G~Vv~vG~~v~~~~~GdrV~~~~~~~~c~~c~~c~~~~~~~c~~~~~~~~~~~~~~~~~~g~~a~~v~v~~~~  148 (361)
                      .-|.|+++.+.+|+++++.     +|++.+.+  ||+|.+|    ++.|.+....       |...++.|++++.++. .
T Consensus        89 ~~~~~a~~hl~~Va~GldS-----~V~GE~qI--~gQvk~a----~~~a~~~~~~-------g~~l~~lf~~a~~~~k-~  149 (417)
T TIGR01035        89 LTGESAVEHLFRVASGLDS-----MVVGETQI--LGQVKNA----YKVAQEEKTV-------GKVLERLFQKAFSVGK-R  149 (417)
T ss_pred             cCchHHHHHHHHHHhhhhh-----hhcCChHH--HHHHHHH----HHHHHHcCCc-------hHHHHHHHHHHHHHhh-h
Confidence            5789999999999998875     56566665  8999999    5556554332       4456788999998876 3


Q ss_pred             eEE---C-CCCCCcccccccchhhhhhhhHhhhcCCCCCCCEEEEEcCChHHHHHHHHHHHcC-CeEEEEeCCchhHHHH
Q 018067          149 VVR---I-PEGTPLDATAPLLCAGITVYSPLRFYGLDKPGMHVGVVGLGGLGHVAVKFAKAMG-VKVTVISTSPSKKSEA  223 (361)
Q Consensus       149 ~~~---i-p~~~~~~~aa~l~~~~~ta~~~l~~~~~~~~g~~vlV~Gag~vG~~a~~la~~~g-~~vi~~~~~~~~~~~~  223 (361)
                      +..   + +..++...+        +.-.+....+ ..++++|+|+|+|.+|..+++.++..| .+|+++.++.++...+
T Consensus       150 vr~~t~i~~~~vSv~~~--------Av~la~~~~~-~l~~~~VlViGaG~iG~~~a~~L~~~G~~~V~v~~rs~~ra~~l  220 (417)
T TIGR01035       150 VRTETDISAGAVSISSA--------AVELAERIFG-SLKGKKALLIGAGEMGELVAKHLLRKGVGKILIANRTYERAEDL  220 (417)
T ss_pred             hhhhcCCCCCCcCHHHH--------HHHHHHHHhC-CccCCEEEEECChHHHHHHHHHHHHCCCCEEEEEeCCHHHHHHH
Confidence            332   2 212222221        1112222233 367899999999999999999999999 5899999988877778


Q ss_pred             HHHcCCCEEecCCCHHHHHHhcCCccEEEEcCCCccc
Q 018067          224 IERLGADSFLVSRDQDEMQAAMGTMDGIIDTVSAVHP  260 (361)
Q Consensus       224 ~~~~g~~~vv~~~~~~~~~~~~~g~d~vid~~g~~~~  260 (361)
                      ++++|... ++.   +...+...++|+||+|++.+..
T Consensus       221 a~~~g~~~-i~~---~~l~~~l~~aDvVi~aT~s~~~  253 (417)
T TIGR01035       221 AKELGGEA-VKF---EDLEEYLAEADIVISSTGAPHP  253 (417)
T ss_pred             HHHcCCeE-eeH---HHHHHHHhhCCEEEECCCCCCc
Confidence            78888643 222   2333444589999999988653

This enzyme, together with glutamate-1-semialdehyde-2,1-aminomutase (TIGR00713), leads to the production of delta-amino-levulinic acid from Glu-tRNA.

>PRK08306 dipicolinate synthase subunit A; Reviewed

Probab=98.61  E-value=2.5e-06  Score=77.67  Aligned_cols=121  Identities=17%  Similarity=0.210  Sum_probs=87.5

Q ss_pred             hHhhhcCCCCCCCEEEEEcCChHHHHHHHHHHHcCCeEEEEeCCchhHHHHHHHcCCCEEecCCCHHHHHHhcCCccEEE
Q 018067          173 SPLRFYGLDKPGMHVGVVGLGGLGHVAVKFAKAMGVKVTVISTSPSKKSEAIERLGADSFLVSRDQDEMQAAMGTMDGII  252 (361)
Q Consensus       173 ~~l~~~~~~~~g~~vlV~Gag~vG~~a~~la~~~g~~vi~~~~~~~~~~~~~~~~g~~~vv~~~~~~~~~~~~~g~d~vi  252 (361)
                      .++.....--.+++|+|+|.|.+|+.+++.++.+|++|++++++.++.... +.+|++.+ .   .+.+.+...++|+||
T Consensus       141 ~a~~~~~~~l~g~kvlViG~G~iG~~~a~~L~~~Ga~V~v~~r~~~~~~~~-~~~G~~~~-~---~~~l~~~l~~aDiVI  215 (296)
T PRK08306        141 MAIEHTPITIHGSNVLVLGFGRTGMTLARTLKALGANVTVGARKSAHLARI-TEMGLSPF-H---LSELAEEVGKIDIIF  215 (296)
T ss_pred             HHHHhCCCCCCCCEEEEECCcHHHHHHHHHHHHCCCEEEEEECCHHHHHHH-HHcCCeee-c---HHHHHHHhCCCCEEE
Confidence            334433322368999999999999999999999999999999987765444 67887543 1   223345556899999


Q ss_pred             EcCCCcccHHHHHhccccCCEEEEecCCCCCcccChHHHHhCCcEEEe
Q 018067          253 DTVSAVHPLMPLIGLLKSQGKLVLVGAPEKPLELPAFSLLMGRKIVGG  300 (361)
Q Consensus       253 d~~g~~~~~~~~~~~l~~~G~~v~~g~~~~~~~~~~~~~~~~~~~i~g  300 (361)
                      ++++........++.+++++.+++++..++...+.  ..-.+.+++.+
T Consensus       216 ~t~p~~~i~~~~l~~~~~g~vIIDla~~pggtd~~--~a~~~Gv~~~~  261 (296)
T PRK08306        216 NTIPALVLTKEVLSKMPPEALIIDLASKPGGTDFE--YAEKRGIKALL  261 (296)
T ss_pred             ECCChhhhhHHHHHcCCCCcEEEEEccCCCCcCee--ehhhCCeEEEE
Confidence            99987654457788899999999999876655543  23335566664

>TIGR00561 pntA NAD(P) transhydrogenase, alpha subunit

Probab=98.61  E-value=6.2e-07  Score=86.41  Aligned_cols=124  Identities=22%  Similarity=0.210  Sum_probs=87.1

Q ss_pred             CCCCEEEEEcCChHHHHHHHHHHHcCCeEEEEeCCchhHHHHHHHcCCCEE-ecCCC-------------HHH-------
Q 018067          182 KPGMHVGVVGLGGLGHVAVKFAKAMGVKVTVISTSPSKKSEAIERLGADSF-LVSRD-------------QDE-------  240 (361)
Q Consensus       182 ~~g~~vlV~Gag~vG~~a~~la~~~g~~vi~~~~~~~~~~~~~~~~g~~~v-v~~~~-------------~~~-------  240 (361)
                      .++++|+|+|+|.+|++++++|+.+|++|++++.+.++++.+ +++|++.+ ++..+             .+.       
T Consensus       162 vp~akVlViGaG~iGl~Aa~~ak~lGA~V~v~d~~~~rle~a-~~lGa~~v~v~~~e~g~~~~gYa~~~s~~~~~~~~~~  240 (511)
T TIGR00561       162 VPPAKVLVIGAGVAGLAAIGAANSLGAIVRAFDTRPEVKEQV-QSMGAEFLELDFKEEGGSGDGYAKVMSEEFIAAEMEL  240 (511)
T ss_pred             CCCCEEEEECCCHHHHHHHHHHHHCCCEEEEEeCCHHHHHHH-HHcCCeEEeccccccccccccceeecCHHHHHHHHHH
Confidence            357899999999999999999999999999999888865544 78998752 22211             111       


Q ss_pred             HHHhcCCccEEEEcC---CCcc---cHHHHHhccccCCEEEEecCCCC-CcccC-hHH-HH-hCCcEEEecccCCH
Q 018067          241 MQAAMGTMDGIIDTV---SAVH---PLMPLIGLLKSQGKLVLVGAPEK-PLELP-AFS-LL-MGRKIVGGSMIGGM  306 (361)
Q Consensus       241 ~~~~~~g~d~vid~~---g~~~---~~~~~~~~l~~~G~~v~~g~~~~-~~~~~-~~~-~~-~~~~~i~g~~~~~~  306 (361)
                      ..+...++|++|+++   |.+.   .....++.+++|+.+++++...+ .+++. +.. +. .+++++.+......
T Consensus       241 ~~e~~~~~DIVI~TalipG~~aP~Lit~emv~~MKpGsvIVDlA~d~GGn~E~t~p~~~~~~~~GV~~~gv~nlPs  316 (511)
T TIGR00561       241 FAAQAKEVDIIITTALIPGKPAPKLITEEMVDSMKAGSVIVDLAAEQGGNCEYTKPGEVYTTENQVKVIGYTDLPS  316 (511)
T ss_pred             HHHHhCCCCEEEECcccCCCCCCeeehHHHHhhCCCCCEEEEeeeCCCCCEEEecCceEEEecCCEEEEeeCCccc
Confidence            112224799999999   6533   46788999999999999987543 33332 112 22 23488888776443

In some species, such as Rhodospirillum rubrum, the alpha chain is replaced by two shorter chains, both with some homology to the full-length alpha chain modeled here. These score below the trusted cutoff.

>TIGR00518 alaDH alanine dehydrogenase

Probab=98.47  E-value=3.7e-06  Score=78.94  Aligned_cols=121  Identities=18%  Similarity=0.177  Sum_probs=85.5

Q ss_pred             CCCEEEEEcCChHHHHHHHHHHHcCCeEEEEeCCchhHHHHHHHcCCCEEecCCCHHHHHHhcCCccEEEEcC---CC--
Q 018067          183 PGMHVGVVGLGGLGHVAVKFAKAMGVKVTVISTSPSKKSEAIERLGADSFLVSRDQDEMQAAMGTMDGIIDTV---SA--  257 (361)
Q Consensus       183 ~g~~vlV~Gag~vG~~a~~la~~~g~~vi~~~~~~~~~~~~~~~~g~~~vv~~~~~~~~~~~~~g~d~vid~~---g~--  257 (361)
                      ++.+|+|+|+|.+|+.+++.|+.+|++|++++++.++.+.+.+.++........+.+.+.+....+|++|+++   +.  
T Consensus       166 ~~~~VlViGaG~vG~~aa~~a~~lGa~V~v~d~~~~~~~~l~~~~g~~v~~~~~~~~~l~~~l~~aDvVI~a~~~~g~~~  245 (370)
T TIGR00518       166 EPGDVTIIGGGVVGTNAAKMANGLGATVTILDINIDRLRQLDAEFGGRIHTRYSNAYEIEDAVKRADLLIGAVLIPGAKA  245 (370)
T ss_pred             CCceEEEEcCCHHHHHHHHHHHHCCCeEEEEECCHHHHHHHHHhcCceeEeccCCHHHHHHHHccCCEEEEccccCCCCC
Confidence            3456999999999999999999999999999998887777766777643334445555566667899999998   33  


Q ss_pred             cc-cHHHHHhccccCCEEEEecCCCC-CcccCh-H-----HHHhCCcEEEeccc
Q 018067          258 VH-PLMPLIGLLKSQGKLVLVGAPEK-PLELPA-F-----SLLMGRKIVGGSMI  303 (361)
Q Consensus       258 ~~-~~~~~~~~l~~~G~~v~~g~~~~-~~~~~~-~-----~~~~~~~~i~g~~~  303 (361)
                      +. .....++.+++++.+++++...+ .++.+. .     .+...++.+.+...
T Consensus       246 p~lit~~~l~~mk~g~vIvDva~d~GG~~e~~~~t~~d~p~~~~~Gv~~~~v~n  299 (370)
T TIGR00518       246 PKLVSNSLVAQMKPGAVIVDVAIDQGGCVETSRPTTHDQPTYAVHDVVHYCVAN  299 (370)
T ss_pred             CcCcCHHHHhcCCCCCEEEEEecCCCCCccCCcCCCCCCCEEEECCeEEEEeCC
Confidence            22 13678888999999999987543 322211 1     12335566666644

The family of known L-alanine dehydrogenases includes representatives from the Proteobacteria, Firmicutes, and Cyanobacteria, all with about 50 % identity or better. An outlier to this group in both sequence and gap pattern is the homolog from Helicobacter pylori, an epsilon division Proteobacteria, which must be considered a putative alanine dehydrogenase. Related proteins include saccharopine dehydrogenase and the N-terminal half of the NAD(P) transhydrogenase alpha subunit. All of these related proteins bind NAD and/or NADP.

>TIGR00936 ahcY adenosylhomocysteinase

Probab=98.38  E-value=4.5e-06  Score=78.51  Aligned_cols=104  Identities=19%  Similarity=0.142  Sum_probs=78.6

Q ss_pred             hhhhHhhhcCC-CCCCCEEEEEcCChHHHHHHHHHHHcCCeEEEEeCCchhHHHHHHHcCCCEEecCCCHHHHHHhcCCc
Q 018067          170 TVYSPLRFYGL-DKPGMHVGVVGLGGLGHVAVKFAKAMGVKVTVISTSPSKKSEAIERLGADSFLVSRDQDEMQAAMGTM  248 (361)
Q Consensus       170 ta~~~l~~~~~-~~~g~~vlV~Gag~vG~~a~~la~~~g~~vi~~~~~~~~~~~~~~~~g~~~vv~~~~~~~~~~~~~g~  248 (361)
                      ++|.++.+... ...|++|+|+|.|.+|+.+++.++.+|++|++++.++.+.... ...|+. +++.      .+...+.
T Consensus       180 s~~~~i~r~t~~~l~Gk~VvViG~G~IG~~vA~~ak~~Ga~ViV~d~dp~r~~~A-~~~G~~-v~~l------eeal~~a  251 (406)
T TIGR00936       180 STIDGILRATNLLIAGKTVVVAGYGWCGKGIAMRARGMGARVIVTEVDPIRALEA-AMDGFR-VMTM------EEAAKIG  251 (406)
T ss_pred             hHHHHHHHhcCCCCCcCEEEEECCCHHHHHHHHHHhhCcCEEEEEeCChhhHHHH-HhcCCE-eCCH------HHHHhcC
Confidence            34555544432 3689999999999999999999999999999988777665444 455663 2211      1233578


Q ss_pred             cEEEEcCCCcccHHH-HHhccccCCEEEEecCCC
Q 018067          249 DGIIDTVSAVHPLMP-LIGLLKSQGKLVLVGAPE  281 (361)
Q Consensus       249 d~vid~~g~~~~~~~-~~~~l~~~G~~v~~g~~~  281 (361)
                      |++|+++|....+.. .+..+++++.++.+|..+
T Consensus       252 DVVItaTG~~~vI~~~~~~~mK~GailiN~G~~~  285 (406)
T TIGR00936       252 DIFITATGNKDVIRGEHFENMKDGAIVANIGHFD  285 (406)
T ss_pred             CEEEECCCCHHHHHHHHHhcCCCCcEEEEECCCC
Confidence            999999999886664 888999999999998754

This enzyme hydrolyzes adenosylhomocysteine as part of a cycle for the regeneration of the methyl donor S-adenosylmethionine. Species that lack this enzyme are likely to have adenosylhomocysteine nucleosidase (EC 3.2.2.9), an enzyme which also acts as 5'-methyladenosine nucleosidase (see TIGR01704).

>PRK12771 putative glutamate synthase (NADPH) small subunit; Provisional

Probab=98.35  E-value=1.2e-06  Score=87.20  Aligned_cols=122  Identities=25%  Similarity=0.215  Sum_probs=78.8

Q ss_pred             CCCCCEEEEEcCChHHHHHHHHHHHcCCeEEEEeCCc--------------------hhHHHHHHHcCCCEEecCCC-HH
Q 018067          181 DKPGMHVGVVGLGGLGHVAVKFAKAMGVKVTVISTSP--------------------SKKSEAIERLGADSFLVSRD-QD  239 (361)
Q Consensus       181 ~~~g~~vlV~Gag~vG~~a~~la~~~g~~vi~~~~~~--------------------~~~~~~~~~~g~~~vv~~~~-~~  239 (361)
                      .++|++|+|+|+|++|+++++.++..|++|++++..+                    +.+.+.++++|++..++... .+
T Consensus       134 ~~~g~~V~VIGaGpaGL~aA~~l~~~G~~V~v~e~~~~~GG~l~~gip~~~~~~~~~~~~l~~~~~~Gv~~~~~~~~~~~  213 (564)
T PRK12771        134 PDTGKRVAVIGGGPAGLSAAYHLRRMGHAVTIFEAGPKLGGMMRYGIPAYRLPREVLDAEIQRILDLGVEVRLGVRVGED  213 (564)
T ss_pred             CCCCCEEEEECCCHHHHHHHHHHHHCCCeEEEEecCCCCCCeeeecCCCccCCHHHHHHHHHHHHHCCCEEEeCCEECCc
Confidence            5789999999999999999999999999999887431                    22334456789876665432 12


Q ss_pred             -HHHHhcCCccEEEEcCCCcccHHHHHhccccCCEEEEecCCCCCcccChHHHHhCCcEEEeccc
Q 018067          240 -EMQAAMGTMDGIIDTVSAVHPLMPLIGLLKSQGKLVLVGAPEKPLELPAFSLLMGRKIVGGSMI  303 (361)
Q Consensus       240 -~~~~~~~g~d~vid~~g~~~~~~~~~~~l~~~G~~v~~g~~~~~~~~~~~~~~~~~~~i~g~~~  303 (361)
                       .......++|+||+++|........+.....+|.+..++......... .....+++.|.|...
T Consensus       214 ~~~~~~~~~~D~Vi~AtG~~~~~~~~i~g~~~~gv~~~~~~l~~~~~~~-~~~~gk~v~ViGgg~  277 (564)
T PRK12771        214 ITLEQLEGEFDAVFVAIGAQLGKRLPIPGEDAAGVLDAVDFLRAVGEGE-PPFLGKRVVVIGGGN  277 (564)
T ss_pred             CCHHHHHhhCCEEEEeeCCCCCCcCCCCCCccCCcEEHHHHHHHhhccC-CcCCCCCEEEECChH
Confidence             122334579999999998754444555555666665554322111111 123356777777443

>PLN02494 adenosylhomocysteinase

Probab=98.34  E-value=6.6e-06  Score=78.13  Aligned_cols=102  Identities=17%  Similarity=0.159  Sum_probs=78.0

Q ss_pred             hhHhhhcCC-CCCCCEEEEEcCChHHHHHHHHHHHcCCeEEEEeCCchhHHHHHHHcCCCEEecCCCHHHHHHhcCCccE
Q 018067          172 YSPLRFYGL-DKPGMHVGVVGLGGLGHVAVKFAKAMGVKVTVISTSPSKKSEAIERLGADSFLVSRDQDEMQAAMGTMDG  250 (361)
Q Consensus       172 ~~~l~~~~~-~~~g~~vlV~Gag~vG~~a~~la~~~g~~vi~~~~~~~~~~~~~~~~g~~~vv~~~~~~~~~~~~~g~d~  250 (361)
                      |.++.+... .-.|++|+|+|.|.+|..+++.++.+|++|+++..++.+.... ...|+..+ +      +.++....|+
T Consensus       241 ~d~i~r~t~i~LaGKtVvViGyG~IGr~vA~~aka~Ga~VIV~e~dp~r~~eA-~~~G~~vv-~------leEal~~ADV  312 (477)
T PLN02494        241 PDGLMRATDVMIAGKVAVICGYGDVGKGCAAAMKAAGARVIVTEIDPICALQA-LMEGYQVL-T------LEDVVSEADI  312 (477)
T ss_pred             HHHHHHhcCCccCCCEEEEECCCHHHHHHHHHHHHCCCEEEEEeCCchhhHHH-HhcCCeec-c------HHHHHhhCCE
Confidence            555544433 3679999999999999999999999999999988877654444 45566422 1      1223346899


Q ss_pred             EEEcCCCcccH-HHHHhccccCCEEEEecCCC
Q 018067          251 IIDTVSAVHPL-MPLIGLLKSQGKLVLVGAPE  281 (361)
Q Consensus       251 vid~~g~~~~~-~~~~~~l~~~G~~v~~g~~~  281 (361)
                      +|++.|+...+ ...++.+++++.++.+|...
T Consensus       313 VI~tTGt~~vI~~e~L~~MK~GAiLiNvGr~~  344 (477)
T PLN02494        313 FVTTTGNKDIIMVDHMRKMKNNAIVCNIGHFD  344 (477)
T ss_pred             EEECCCCccchHHHHHhcCCCCCEEEEcCCCC
Confidence            99999987754 78999999999999999854

>PRK00045 hemA glutamyl-tRNA reductase; Reviewed

Probab=98.19  E-value=1.1e-07  Score=91.08  Aligned_cols=160  Identities=21%  Similarity=0.262  Sum_probs=99.4

Q ss_pred             cccccccEEEEEeCCCCCCCCCCCEEEeccccCCCCCCcccccCCCCCCcchhcccccccCCCCcCCCcceeEEeecCCc
Q 018067           69 VPGHEIVGVVTEVGSKVSKFKVGDKVGVGCMVGSCRSCDSCAIDLENYCPKVIMTYANKYHDGTITYGGYSDIMVADEHF  148 (361)
Q Consensus        69 ~lG~e~~G~Vv~vG~~v~~~~~GdrV~~~~~~~~c~~c~~c~~~~~~~c~~~~~~~~~~~~~~~~~~g~~a~~v~v~~~~  148 (361)
                      .-|||+++.+.+|+++++..-+|+.     .+  ||   +|+ ..++.|.....       .|...++.|++.+.++.  
T Consensus        91 ~~g~ea~~hl~~V~~GldS~V~GE~-----qI--lg---Qvk-~a~~~a~~~g~-------~g~~l~~lf~~a~~~~k--  150 (423)
T PRK00045         91 HEGEEAVRHLFRVASGLDSMVLGEP-----QI--LG---QVK-DAYALAQEAGT-------VGTILNRLFQKAFSVAK--  150 (423)
T ss_pred             cCCHHHHHHHHHHHhhhhhhhcCCh-----HH--HH---HHH-HHHHHHHHcCC-------chHHHHHHHHHHHHHHh--
Confidence            4699999999999999876444443     22  33   333 22222322211       12234566666555543  


Q ss_pred             eEECCCCCCcccccccchhhhhhhhHhhhcCC---CCCCCEEEEEcCChHHHHHHHHHHHcCC-eEEEEeCCchhHHHHH
Q 018067          149 VVRIPEGTPLDATAPLLCAGITVYSPLRFYGL---DKPGMHVGVVGLGGLGHVAVKFAKAMGV-KVTVISTSPSKKSEAI  224 (361)
Q Consensus       149 ~~~ip~~~~~~~aa~l~~~~~ta~~~l~~~~~---~~~g~~vlV~Gag~vG~~a~~la~~~g~-~vi~~~~~~~~~~~~~  224 (361)
                            .+..+.+. ...+...++.++.....   -.++++|+|+|+|.+|.++++.++..|+ +|+++.++.++...++
T Consensus       151 ------~v~~~t~i-~~~~~Sv~~~Av~~a~~~~~~~~~~~vlViGaG~iG~~~a~~L~~~G~~~V~v~~r~~~ra~~la  223 (423)
T PRK00045        151 ------RVRTETGI-GAGAVSVASAAVELAKQIFGDLSGKKVLVIGAGEMGELVAKHLAEKGVRKITVANRTLERAEELA  223 (423)
T ss_pred             ------hHhhhcCC-CCCCcCHHHHHHHHHHHhhCCccCCEEEEECchHHHHHHHHHHHHCCCCeEEEEeCCHHHHHHHH
Confidence                  22222211 11123333444433221   2578999999999999999999999998 8888999888877788


Q ss_pred             HHcCCCEEecCCCHHHHHHhcCCccEEEEcCCCcc
Q 018067          225 ERLGADSFLVSRDQDEMQAAMGTMDGIIDTVSAVH  259 (361)
Q Consensus       225 ~~~g~~~vv~~~~~~~~~~~~~g~d~vid~~g~~~  259 (361)
                      +++|.+ +++.   +.......++|+||+++|.+.
T Consensus       224 ~~~g~~-~~~~---~~~~~~l~~aDvVI~aT~s~~  254 (423)
T PRK00045        224 EEFGGE-AIPL---DELPEALAEADIVISSTGAPH  254 (423)
T ss_pred             HHcCCc-EeeH---HHHHHHhccCCEEEECCCCCC
Confidence            888864 3322   223334458999999999865

>cd05213 NAD_bind_Glutamyl_tRNA_reduct NADP-binding domain of glutamyl-tRNA reductase

Probab=98.18  E-value=6.6e-06  Score=75.56  Aligned_cols=109  Identities=20%  Similarity=0.254  Sum_probs=79.6

Q ss_pred             CceEECCCCCCcccccccchhhhhhhhHhhhcCCC---CCCCEEEEEcCChHHHHHHHHHHHcCC-eEEEEeCCchhHHH
Q 018067          147 HFVVRIPEGTPLDATAPLLCAGITVYSPLRFYGLD---KPGMHVGVVGLGGLGHVAVKFAKAMGV-KVTVISTSPSKKSE  222 (361)
Q Consensus       147 ~~~~~ip~~~~~~~aa~l~~~~~ta~~~l~~~~~~---~~g~~vlV~Gag~vG~~a~~la~~~g~-~vi~~~~~~~~~~~  222 (361)
                      ...+++|+.+..+.++... +...++.++......   -++.+|+|+|+|.+|..+++.++..|+ +|+++.++.++...
T Consensus       139 ~~a~~~~k~vr~et~i~~~-~~sv~~~Av~~a~~~~~~l~~~~V~ViGaG~iG~~~a~~L~~~g~~~V~v~~r~~~ra~~  217 (311)
T cd05213         139 QKAIKVGKRVRTETGISRG-AVSISSAAVELAEKIFGNLKGKKVLVIGAGEMGELAAKHLAAKGVAEITIANRTYERAEE  217 (311)
T ss_pred             HHHHHHHHHHhhhcCCCCC-CcCHHHHHHHHHHHHhCCccCCEEEEECcHHHHHHHHHHHHHcCCCEEEEEeCCHHHHHH
Confidence            3567788888888776543 344555555433321   378999999999999999999998775 78888888888888


Q ss_pred             HHHHcCCCEEecCCCHHHHHHhcCCccEEEEcCCCccc
Q 018067          223 AIERLGADSFLVSRDQDEMQAAMGTMDGIIDTVSAVHP  260 (361)
Q Consensus       223 ~~~~~g~~~vv~~~~~~~~~~~~~g~d~vid~~g~~~~  260 (361)
                      +++++|+. +++.   +...+....+|+||.+++.+..
T Consensus       218 la~~~g~~-~~~~---~~~~~~l~~aDvVi~at~~~~~  251 (311)
T cd05213         218 LAKELGGN-AVPL---DELLELLNEADVVISATGAPHY  251 (311)
T ss_pred             HHHHcCCe-EEeH---HHHHHHHhcCCEEEECCCCCch
Confidence            88999874 2322   2233334568999999999874

Glutamyl-tRNA reductase catalyzes the conversion of glutamyl-tRNA to glutamate-1-semialdehyde, initiating the synthesis of tetrapyrrole. Whereas tRNAs are generally associated with peptide bond formation in protein translation, here the tRNA activates glutamate in the initiation of tetrapyrrole biosynthesis in archaea, plants and many bacteria. In the first step, activated glutamate is reduced to glutamate-1-semi-aldehyde via the NADPH dependent glutamyl-tRNA reductase. Glutamyl-tRNA reductase forms a V-shaped dimer. Each monomer has 3 domains: an N-terminal catalytic domain, a classic nucleotide binding domain, and a C-terminal dimerization domain. Although the representative structure 1GPJ lacks a bound NADPH, a theoretical binding pocket has been described. (PMID 11172694). Amino acid dehydrogenase (DH)-like NAD(P)-binding domains are members of the Rossmann fold superfamily and include glutamate,

>COG4221 Short-chain alcohol dehydrogenase of unknown specificity [General function prediction only]

Probab=98.14  E-value=2.9e-05  Score=66.99  Aligned_cols=75  Identities=19%  Similarity=0.321  Sum_probs=60.8

Q ss_pred             CCCEEEEEcC-ChHHHHHHHHHHHcCCeEEEEeCCchhHHHHHHHcCC----CEEecCCCHHH----HHHhc---CCccE
Q 018067          183 PGMHVGVVGL-GGLGHVAVKFAKAMGVKVTVISTSPSKKSEAIERLGA----DSFLVSRDQDE----MQAAM---GTMDG  250 (361)
Q Consensus       183 ~g~~vlV~Ga-g~vG~~a~~la~~~g~~vi~~~~~~~~~~~~~~~~g~----~~vv~~~~~~~----~~~~~---~g~d~  250 (361)
                      +++.++|.|+ +++|.++++.+...|++|+.++|..+++++++.+++.    -..+|-.+.+.    +..+.   +.+|+
T Consensus         5 ~~kv~lITGASSGiG~A~A~~l~~~G~~vvl~aRR~drL~~la~~~~~~~~~~~~~DVtD~~~~~~~i~~~~~~~g~iDi   84 (246)
T COG4221           5 KGKVALITGASSGIGEATARALAEAGAKVVLAARREERLEALADEIGAGAALALALDVTDRAAVEAAIEALPEEFGRIDI   84 (246)
T ss_pred             CCcEEEEecCcchHHHHHHHHHHHCCCeEEEEeccHHHHHHHHHhhccCceEEEeeccCCHHHHHHHHHHHHHhhCcccE
Confidence            4578899998 9999999999999999999999999999999999993    23456566543    23232   46999


Q ss_pred             EEEcCCC
Q 018067          251 IIDTVSA  257 (361)
Q Consensus       251 vid~~g~  257 (361)
                      .++++|.
T Consensus        85 LvNNAGl   91 (246)
T COG4221          85 LVNNAGL   91 (246)
T ss_pred             EEecCCC
Confidence            9999985

>TIGR02853 spore_dpaA dipicolinic acid synthetase, A subunit

Probab=98.14  E-value=6.4e-05  Score=68.06  Aligned_cols=99  Identities=18%  Similarity=0.302  Sum_probs=75.2

Q ss_pred             CCCEEEEEcCChHHHHHHHHHHHcCCeEEEEeCCchhHHHHHHHcCCCEEecCCCHHHHHHhcCCccEEEEcCCCcccHH
Q 018067          183 PGMHVGVVGLGGLGHVAVKFAKAMGVKVTVISTSPSKKSEAIERLGADSFLVSRDQDEMQAAMGTMDGIIDTVSAVHPLM  262 (361)
Q Consensus       183 ~g~~vlV~Gag~vG~~a~~la~~~g~~vi~~~~~~~~~~~~~~~~g~~~vv~~~~~~~~~~~~~g~d~vid~~g~~~~~~  262 (361)
                      .|++++|+|.|.+|.+++..++.+|++|++.+++.++...+ .++|...+ .   .+.+.+....+|+||+++.....-.
T Consensus       150 ~gk~v~IiG~G~iG~avA~~L~~~G~~V~v~~R~~~~~~~~-~~~g~~~~-~---~~~l~~~l~~aDiVint~P~~ii~~  224 (287)
T TIGR02853       150 HGSNVMVLGFGRTGMTIARTFSALGARVFVGARSSADLARI-TEMGLIPF-P---LNKLEEKVAEIDIVINTIPALVLTA  224 (287)
T ss_pred             CCCEEEEEcChHHHHHHHHHHHHCCCEEEEEeCCHHHHHHH-HHCCCeee-c---HHHHHHHhccCCEEEECCChHHhCH
Confidence            58899999999999999999999999999999987765554 45565432 1   2234455568999999997654234


Q ss_pred             HHHhccccCCEEEEecCCCCCccc
Q 018067          263 PLIGLLKSQGKLVLVGAPEKPLEL  286 (361)
Q Consensus       263 ~~~~~l~~~G~~v~~g~~~~~~~~  286 (361)
                      ..++.++++..+++++..++...|
T Consensus       225 ~~l~~~k~~aliIDlas~Pg~tdf  248 (287)
T TIGR02853       225 DVLSKLPKHAVIIDLASKPGGTDF  248 (287)
T ss_pred             HHHhcCCCCeEEEEeCcCCCCCCH
Confidence            577788999999999887655544

This predicted Rossman fold-containing protein is the A subunit of dipicolinic acid synthetase as found in most, though not all, endospore-forming low-GC Gram-positive bacteria; it is absent in Clostridium. The B subunit is represented by TIGR02852. This protein is also known as SpoVFA.

>PTZ00075 Adenosylhomocysteinase; Provisional

Probab=98.14  E-value=2.4e-05  Score=74.52  Aligned_cols=125  Identities=14%  Similarity=0.167  Sum_probs=86.7

Q ss_pred             ceEECCCCCCccccc-ccchhhhhhhhHhhhc-CCCCCCCEEEEEcCChHHHHHHHHHHHcCCeEEEEeCCchhHHHHHH
Q 018067          148 FVVRIPEGTPLDATA-PLLCAGITVYSPLRFY-GLDKPGMHVGVVGLGGLGHVAVKFAKAMGVKVTVISTSPSKKSEAIE  225 (361)
Q Consensus       148 ~~~~ip~~~~~~~aa-~l~~~~~ta~~~l~~~-~~~~~g~~vlV~Gag~vG~~a~~la~~~g~~vi~~~~~~~~~~~~~~  225 (361)
                      .++.+|+...-..+- .+.+ ..+.+.++.+. ...-.|++|+|+|.|.+|..+++.++.+|++|+++.+++.+.... .
T Consensus       217 PV~nv~d~~tk~~aD~~~G~-~~s~~d~~~R~~~~~LaGKtVgVIG~G~IGr~vA~rL~a~Ga~ViV~e~dp~~a~~A-~  294 (476)
T PTZ00075        217 PAINVNDSVTKSKFDNIYGC-RHSLIDGIFRATDVMIAGKTVVVCGYGDVGKGCAQALRGFGARVVVTEIDPICALQA-A  294 (476)
T ss_pred             eEEEeCCcchHHHHHHHHHH-HHHHHHHHHHhcCCCcCCCEEEEECCCHHHHHHHHHHHHCCCEEEEEeCCchhHHHH-H
Confidence            456667665433332 2222 22333444333 334589999999999999999999999999999887776554333 3


Q ss_pred             HcCCCEEecCCCHHHHHHhcCCccEEEEcCCCcccHH-HHHhccccCCEEEEecCCC
Q 018067          226 RLGADSFLVSRDQDEMQAAMGTMDGIIDTVSAVHPLM-PLIGLLKSQGKLVLVGAPE  281 (361)
Q Consensus       226 ~~g~~~vv~~~~~~~~~~~~~g~d~vid~~g~~~~~~-~~~~~l~~~G~~v~~g~~~  281 (361)
                      ..|+..+       .+.++...+|+|+.+.|....+. ..+..+++++.++.+|...
T Consensus       295 ~~G~~~~-------~leell~~ADIVI~atGt~~iI~~e~~~~MKpGAiLINvGr~d  344 (476)
T PTZ00075        295 MEGYQVV-------TLEDVVETADIFVTATGNKDIITLEHMRRMKNNAIVGNIGHFD  344 (476)
T ss_pred             hcCceec-------cHHHHHhcCCEEEECCCcccccCHHHHhccCCCcEEEEcCCCc
Confidence            3565421       12344567999999999877664 7999999999999998754

>PRK08324 short chain dehydrogenase; Validated

Probab=98.06  E-value=2.3e-05  Score=79.89  Aligned_cols=132  Identities=20%  Similarity=0.218  Sum_probs=88.9

Q ss_pred             CcceeEEeecCCceEECCCCCCcccccccchhhhhhhhHhhhc--CCCCCCCEEEEEcC-ChHHHHHHHHHHHcCCeEEE
Q 018067          136 GGYSDIMVADEHFVVRIPEGTPLDATAPLLCAGITVYSPLRFY--GLDKPGMHVGVVGL-GGLGHVAVKFAKAMGVKVTV  212 (361)
Q Consensus       136 g~~a~~v~v~~~~~~~ip~~~~~~~aa~l~~~~~ta~~~l~~~--~~~~~g~~vlV~Ga-g~vG~~a~~la~~~g~~vi~  212 (361)
                      -++++|..++...++.+ +..+.+++..            .+.  ....+|+++||.|+ |++|..+++.+...|++|++
T Consensus       385 ~~~~~~~~l~~~~~f~i-~~~~~e~a~l------------~~~~~~~~l~gk~vLVTGasggIG~~la~~L~~~Ga~Vvl  451 (681)
T PRK08324        385 EAVGRYEPLSEQEAFDI-EYWSLEQAKL------------QRMPKPKPLAGKVALVTGAAGGIGKATAKRLAAEGACVVL  451 (681)
T ss_pred             hhcCCccCCChhhhcce-eeehhhhhhh------------hcCCCCcCCCCCEEEEecCCCHHHHHHHHHHHHCcCEEEE
Confidence            44567777777777766 5565565531            111  11246899999997 99999999999999999999


Q ss_pred             EeCCchhHHHHHHHcCC--C---EEecCCCHHHHHHh-------cCCccEEEEcCCCc----------------------
Q 018067          213 ISTSPSKKSEAIERLGA--D---SFLVSRDQDEMQAA-------MGTMDGIIDTVSAV----------------------  258 (361)
Q Consensus       213 ~~~~~~~~~~~~~~~g~--~---~vv~~~~~~~~~~~-------~~g~d~vid~~g~~----------------------  258 (361)
                      ++++.++...+.+.++.  .   ...|..+++.+..+       .+++|++|+++|..                      
T Consensus       452 ~~r~~~~~~~~~~~l~~~~~v~~v~~Dvtd~~~v~~~~~~~~~~~g~iDvvI~~AG~~~~~~~~~~~~~~~~~~~~~N~~  531 (681)
T PRK08324        452 ADLDEEAAEAAAAELGGPDRALGVACDVTDEAAVQAAFEEAALAFGGVDIVVSNAGIAISGPIEETSDEDWRRSFDVNAT  531 (681)
T ss_pred             EeCCHHHHHHHHHHHhccCcEEEEEecCCCHHHHHHHHHHHHHHcCCCCEEEECCCCCCCCChhhCCHHHHHHHHHHHhH
Confidence            99998877666665553  1   22355555443322       24799999999831                      


Q ss_pred             ---ccHHHHHhcccc---CCEEEEecCC
Q 018067          259 ---HPLMPLIGLLKS---QGKLVLVGAP  280 (361)
Q Consensus       259 ---~~~~~~~~~l~~---~G~~v~~g~~  280 (361)
                         ..++.+...+++   +|+++.+++.
T Consensus       532 g~~~l~~~~~~~l~~~~~~g~iV~vsS~  559 (681)
T PRK08324        532 GHFLVAREAVRIMKAQGLGGSIVFIASK  559 (681)
T ss_pred             HHHHHHHHHHHHHHhcCCCcEEEEECCc
Confidence               113334555555   6899999874

>PF01488 Shikimate_DH: Shikimate / quinate 5-dehydrogenase; InterPro: IPR006151 This entry represents a domain found in shikimate and quinate dehydrogenases, as well as glutamyl-tRNA reductases

Probab=98.00  E-value=1.8e-05  Score=63.33  Aligned_cols=95  Identities=21%  Similarity=0.373  Sum_probs=67.1

Q ss_pred             CCCCEEEEEcCChHHHHHHHHHHHcCC-eEEEEeCCchhHHHHHHHcCCC--EEecCCCHHHHHHhcCCccEEEEcCCCc
Q 018067          182 KPGMHVGVVGLGGLGHVAVKFAKAMGV-KVTVISTSPSKKSEAIERLGAD--SFLVSRDQDEMQAAMGTMDGIIDTVSAV  258 (361)
Q Consensus       182 ~~g~~vlV~Gag~vG~~a~~la~~~g~-~vi~~~~~~~~~~~~~~~~g~~--~vv~~~~~~~~~~~~~g~d~vid~~g~~  258 (361)
                      -++.+++|+|+|++|.+++..+...|+ +++++.|+.++...++++++..  ..+...+   +......+|++|++++..
T Consensus        10 l~~~~vlviGaGg~ar~v~~~L~~~g~~~i~i~nRt~~ra~~l~~~~~~~~~~~~~~~~---~~~~~~~~DivI~aT~~~   86 (135)
T PF01488_consen   10 LKGKRVLVIGAGGAARAVAAALAALGAKEITIVNRTPERAEALAEEFGGVNIEAIPLED---LEEALQEADIVINATPSG   86 (135)
T ss_dssp             GTTSEEEEESSSHHHHHHHHHHHHTTSSEEEEEESSHHHHHHHHHHHTGCSEEEEEGGG---HCHHHHTESEEEE-SSTT
T ss_pred             cCCCEEEEECCHHHHHHHHHHHHHcCCCEEEEEECCHHHHHHHHHHcCccccceeeHHH---HHHHHhhCCeEEEecCCC
Confidence            368899999999999999999999999 5999999999999998888532  2333333   223345799999998876


Q ss_pred             ccHHHHHhccccC----CEEEEecCC
Q 018067          259 HPLMPLIGLLKSQ----GKLVLVGAP  280 (361)
Q Consensus       259 ~~~~~~~~~l~~~----G~~v~~g~~  280 (361)
                      .. ......+...    +-++.++.+
T Consensus        87 ~~-~i~~~~~~~~~~~~~~v~Dla~P  111 (135)
T PF01488_consen   87 MP-IITEEMLKKASKKLRLVIDLAVP  111 (135)
T ss_dssp             ST-SSTHHHHTTTCHHCSEEEES-SS
T ss_pred             Cc-ccCHHHHHHHHhhhhceeccccC
Confidence            42 1112223333    578888764

Shikimate 5-dehydrogenase (1.1.1.25 from EC) catalyses the conversion of shikimate to 5-dehydroshikimate [, ]. This reaction is part of the shikimate pathway which is involved in the biosynthesis of aromatic amino acids []. Quinate 5-dehydrogenase catalyses the conversion of quinate to 5-dehydroquinate. This reaction is part of the quinate pathway where quinic acid is exploited as a source of carbon in prokaryotes and microbial eukaryotes. Both the shikimate and quinate pathways share two common pathway metabolites, 3-dehydroquinate and dehydroshikimate. Glutamyl-tRNA reductase (1.2.1.70 from EC) catalyzes the first step of tetrapyrrole biosynthesis in plants, archaea and most bacteria. The dimeric enzyme has an unusual V-shaped architecture where each monomer consists of three domains linked by a long 'spinal' alpha-helix. The central catalytic domain specifically recognises the glutamate moiety of the substrate []. ; PDB: 2EV9_B 2CY0_B 1WXD_A 2D5C_A 1NVT_B 2EGG_A 3PWZ_A 3DOO_A 3DON_A 3FBT_C ....

>PRK00517 prmA ribosomal protein L11 methyltransferase; Reviewed

Probab=97.99  E-value=6.1e-05  Score=67.02  Aligned_cols=130  Identities=24%  Similarity=0.280  Sum_probs=81.3

Q ss_pred             ceeEEeecCCceEECCCCCCcccccccchhhhhhhhHhhhcCCCCCCCEEEEEcCChHHHHHHHHHHHcCC-eEEEEeCC
Q 018067          138 YSDIMVADEHFVVRIPEGTPLDATAPLLCAGITVYSPLRFYGLDKPGMHVGVVGLGGLGHVAVKFAKAMGV-KVTVISTS  216 (361)
Q Consensus       138 ~a~~v~v~~~~~~~ip~~~~~~~aa~l~~~~~ta~~~l~~~~~~~~g~~vlV~Gag~vG~~a~~la~~~g~-~vi~~~~~  216 (361)
                      |.+|.. +...++.+++++++..+.. +.+.. ....+...  ++++++||-+|+|. |.+++.+++ .|+ +|+.++.+
T Consensus        79 ~~~~~~-~~~~~i~i~p~~afgtg~h-~tt~~-~l~~l~~~--~~~~~~VLDiGcGs-G~l~i~~~~-~g~~~v~giDis  151 (250)
T PRK00517         79 WEDPPD-PDEINIELDPGMAFGTGTH-PTTRL-CLEALEKL--VLPGKTVLDVGCGS-GILAIAAAK-LGAKKVLAVDID  151 (250)
T ss_pred             CcCCCC-CCeEEEEECCCCccCCCCC-HHHHH-HHHHHHhh--cCCCCEEEEeCCcH-HHHHHHHHH-cCCCeEEEEECC
Confidence            445543 6678899999999887652 22211 23333322  46899999999987 888776655 566 59999988


Q ss_pred             chhHHHHHHHc---CCCEEecCCCHHHHHHhcCCccEEEEcCCCcc---cHHHHHhccccCCEEEEecCC
Q 018067          217 PSKKSEAIERL---GADSFLVSRDQDEMQAAMGTMDGIIDTVSAVH---PLMPLIGLLKSQGKLVLVGAP  280 (361)
Q Consensus       217 ~~~~~~~~~~~---g~~~vv~~~~~~~~~~~~~g~d~vid~~g~~~---~~~~~~~~l~~~G~~v~~g~~  280 (361)
                      +.....+.+.+   +....+.....      ...+|+|+-+.....   .+..+.+.|+++|.++..|..
T Consensus       152 ~~~l~~A~~n~~~~~~~~~~~~~~~------~~~fD~Vvani~~~~~~~l~~~~~~~LkpgG~lilsgi~  215 (250)
T PRK00517        152 PQAVEAARENAELNGVELNVYLPQG------DLKADVIVANILANPLLELAPDLARLLKPGGRLILSGIL  215 (250)
T ss_pred             HHHHHHHHHHHHHcCCCceEEEccC------CCCcCEEEEcCcHHHHHHHHHHHHHhcCCCcEEEEEECc
Confidence            77655443322   22110110000      015899987665432   345688889999999988653

>COG0300 DltE Short-chain dehydrogenases of various substrate specificities [General function prediction only]

Probab=97.76  E-value=0.0003  Score=62.29  Aligned_cols=76  Identities=14%  Similarity=0.208  Sum_probs=60.4

Q ss_pred             CCCCEEEEEcC-ChHHHHHHHHHHHcCCeEEEEeCCchhHHHHHHHcCCC-------EEecCCCHHHHHHhc-------C
Q 018067          182 KPGMHVGVVGL-GGLGHVAVKFAKAMGVKVTVISTSPSKKSEAIERLGAD-------SFLVSRDQDEMQAAM-------G  246 (361)
Q Consensus       182 ~~g~~vlV~Ga-g~vG~~a~~la~~~g~~vi~~~~~~~~~~~~~~~~g~~-------~vv~~~~~~~~~~~~-------~  246 (361)
                      ..+.++||.|| ++||...+..+-..|.+++.++|+.+++.++++++.-.       ..+|..+++.+..+.       .
T Consensus         4 ~~~~~~lITGASsGIG~~~A~~lA~~g~~liLvaR~~~kL~~la~~l~~~~~v~v~vi~~DLs~~~~~~~l~~~l~~~~~   83 (265)
T COG0300           4 MKGKTALITGASSGIGAELAKQLARRGYNLILVARREDKLEALAKELEDKTGVEVEVIPADLSDPEALERLEDELKERGG   83 (265)
T ss_pred             CCCcEEEEECCCchHHHHHHHHHHHCCCEEEEEeCcHHHHHHHHHHHHHhhCceEEEEECcCCChhHHHHHHHHHHhcCC
Confidence            56789999998 99999999999999999999999999999888877521       233555655444432       2


Q ss_pred             CccEEEEcCCC
Q 018067          247 TMDGIIDTVSA  257 (361)
Q Consensus       247 g~d~vid~~g~  257 (361)
                      .+|+.++++|-
T Consensus        84 ~IdvLVNNAG~   94 (265)
T COG0300          84 PIDVLVNNAGF   94 (265)
T ss_pred             cccEEEECCCc
Confidence            69999999995

>PLN03209 translocon at the inner envelope of chloroplast subunit 62; Provisional

Probab=97.70  E-value=0.00039  Score=68.08  Aligned_cols=104  Identities=17%  Similarity=0.182  Sum_probs=72.6

Q ss_pred             cCCCCCCCEEEEEcC-ChHHHHHHHHHHHcCCeEEEEeCCchhHHHHHHHc--------CC------C-EEecCCCHHHH
Q 018067          178 YGLDKPGMHVGVVGL-GGLGHVAVKFAKAMGVKVTVISTSPSKKSEAIERL--------GA------D-SFLVSRDQDEM  241 (361)
Q Consensus       178 ~~~~~~g~~vlV~Ga-g~vG~~a~~la~~~g~~vi~~~~~~~~~~~~~~~~--------g~------~-~vv~~~~~~~~  241 (361)
                      ..+.+.|++|||+|+ |.+|..+++.+...|++|++++++.++...+.+.+        |.      . ...|..+.+.+
T Consensus        74 ~~~~~~gKvVLVTGATGgIG~aLAr~LLk~G~~Vval~Rn~ekl~~l~~~l~~~~L~~~Ga~~~~~v~iV~gDLtD~esI  153 (576)
T PLN03209         74 ELDTKDEDLAFVAGATGKVGSRTVRELLKLGFRVRAGVRSAQRAESLVQSVKQMKLDVEGTQPVEKLEIVECDLEKPDQI  153 (576)
T ss_pred             ccccCCCCEEEEECCCCHHHHHHHHHHHHCCCeEEEEeCCHHHHHHHHHHhhhhccccccccccCceEEEEecCCCHHHH
Confidence            344578999999998 99999999999999999999999887765543321        21      1 12355666667


Q ss_pred             HHhcCCccEEEEcCCCcc---------------cHHHHHhccc--cCCEEEEecCCC
Q 018067          242 QAAMGTMDGIIDTVSAVH---------------PLMPLIGLLK--SQGKLVLVGAPE  281 (361)
Q Consensus       242 ~~~~~g~d~vid~~g~~~---------------~~~~~~~~l~--~~G~~v~~g~~~  281 (361)
                      ....+++|+||+++|...               +...+++.++  ..++||.++...
T Consensus       154 ~~aLggiDiVVn~AG~~~~~v~d~~~~~~VN~~Gt~nLl~Aa~~agVgRIV~VSSig  210 (576)
T PLN03209        154 GPALGNASVVICCIGASEKEVFDVTGPYRIDYLATKNLVDAATVAKVNHFILVTSLG  210 (576)
T ss_pred             HHHhcCCCEEEEccccccccccchhhHHHHHHHHHHHHHHHHHHhCCCEEEEEccch
Confidence            666789999999998631               1122334333  237999987653

>COG2518 Pcm Protein-L-isoaspartate carboxylmethyltransferase [Posttranslational modification, protein turnover, chaperones]

Probab=97.66  E-value=0.00043  Score=58.69  Aligned_cols=99  Identities=28%  Similarity=0.305  Sum_probs=71.6

Q ss_pred             hcCCCCCCCEEEEEcCChHHHHHHHHHHHcCCeEEEEeCCchh----HHHHHHHcCCCEEecCCCHHHHHHhc--CCccE
Q 018067          177 FYGLDKPGMHVGVVGLGGLGHVAVKFAKAMGVKVTVISTSPSK----KSEAIERLGADSFLVSRDQDEMQAAM--GTMDG  250 (361)
Q Consensus       177 ~~~~~~~g~~vlV~Gag~vG~~a~~la~~~g~~vi~~~~~~~~----~~~~~~~~g~~~vv~~~~~~~~~~~~--~g~d~  250 (361)
                      +...+++|++||=+|+|. |..++-+++..+ +|+.+.+.++-    +..+ +.+|...+..... |-.....  .+||.
T Consensus        66 ~~L~~~~g~~VLEIGtGs-GY~aAvla~l~~-~V~siEr~~~L~~~A~~~L-~~lg~~nV~v~~g-DG~~G~~~~aPyD~  141 (209)
T COG2518          66 QLLELKPGDRVLEIGTGS-GYQAAVLARLVG-RVVSIERIEELAEQARRNL-ETLGYENVTVRHG-DGSKGWPEEAPYDR  141 (209)
T ss_pred             HHhCCCCCCeEEEECCCc-hHHHHHHHHHhC-eEEEEEEcHHHHHHHHHHH-HHcCCCceEEEEC-CcccCCCCCCCcCE
Confidence            445589999999999875 999999999988 89888887652    2223 5678743322221 1111221  36999


Q ss_pred             EEEcCCCcccHHHHHhccccCCEEEEecC
Q 018067          251 IIDTVSAVHPLMPLIGLLKSQGKLVLVGA  279 (361)
Q Consensus       251 vid~~g~~~~~~~~~~~l~~~G~~v~~g~  279 (361)
                      ++-+.+.+......++.|++||+++..-.
T Consensus       142 I~Vtaaa~~vP~~Ll~QL~~gGrlv~PvG  170 (209)
T COG2518         142 IIVTAAAPEVPEALLDQLKPGGRLVIPVG  170 (209)
T ss_pred             EEEeeccCCCCHHHHHhcccCCEEEEEEc
Confidence            99998888867899999999999987633

>PRK12742 oxidoreductase; Provisional

Probab=97.60  E-value=0.00085  Score=58.86  Aligned_cols=98  Identities=19%  Similarity=0.284  Sum_probs=66.3

Q ss_pred             CCCEEEEEcC-ChHHHHHHHHHHHcCCeEEEEeC-CchhHHHHHHHcCCCEE-ecCCCHHHHHHh---cCCccEEEEcCC
Q 018067          183 PGMHVGVVGL-GGLGHVAVKFAKAMGVKVTVIST-SPSKKSEAIERLGADSF-LVSRDQDEMQAA---MGTMDGIIDTVS  256 (361)
Q Consensus       183 ~g~~vlV~Ga-g~vG~~a~~la~~~g~~vi~~~~-~~~~~~~~~~~~g~~~v-v~~~~~~~~~~~---~~g~d~vid~~g  256 (361)
                      .++++||.|+ |.+|..+++.+...|++|+++.+ .+++..++.++++...+ .|..+.+.+.+.   .+++|++|+++|
T Consensus         5 ~~k~vlItGasggIG~~~a~~l~~~G~~v~~~~~~~~~~~~~l~~~~~~~~~~~D~~~~~~~~~~~~~~~~id~li~~ag   84 (237)
T PRK12742          5 TGKKVLVLGGSRGIGAAIVRRFVTDGANVRFTYAGSKDAAERLAQETGATAVQTDSADRDAVIDVVRKSGALDILVVNAG   84 (237)
T ss_pred             CCCEEEEECCCChHHHHHHHHHHHCCCEEEEecCCCHHHHHHHHHHhCCeEEecCCCCHHHHHHHHHHhCCCcEEEECCC
Confidence            4689999997 99999999999999999987765 44455555556665432 355554443332   246999999987


Q ss_pred             Ccc-------------------------cHHHHHhccccCCEEEEecCC
Q 018067          257 AVH-------------------------PLMPLIGLLKSQGKLVLVGAP  280 (361)
Q Consensus       257 ~~~-------------------------~~~~~~~~l~~~G~~v~~g~~  280 (361)
                      ...                         ....++..++.+|+++.++..
T Consensus        85 ~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~~~g~iv~isS~  133 (237)
T PRK12742         85 IAVFGDALELDADDIDRLFKINIHAPYHASVEAARQMPEGGRIIIIGSV  133 (237)
T ss_pred             CCCCCCcccCCHHHHHHHHhHHHHHHHHHHHHHHHHHhcCCeEEEEecc
Confidence            521                         012333445667999998764

>COG1748 LYS9 Saccharopine dehydrogenase and related proteins [Amino acid transport and metabolism]

Probab=97.58  E-value=0.001  Score=62.22  Aligned_cols=99  Identities=25%  Similarity=0.299  Sum_probs=77.9

Q ss_pred             CEEEEEcCChHHHHHHHHHHHcC-CeEEEEeCCchhHHHHHHHcC--C-CEEecCCCHHHHHHhcCCccEEEEcCCCccc
Q 018067          185 MHVGVVGLGGLGHVAVKFAKAMG-VKVTVISTSPSKKSEAIERLG--A-DSFLVSRDQDEMQAAMGTMDGIIDTVSAVHP  260 (361)
Q Consensus       185 ~~vlV~Gag~vG~~a~~la~~~g-~~vi~~~~~~~~~~~~~~~~g--~-~~vv~~~~~~~~~~~~~g~d~vid~~g~~~~  260 (361)
                      .+|||+|+|.||+.+++.+-+.+ .+|++.+++.++.+++....+  . ...+|..+.+.+.++-.++|+||+++.....
T Consensus         2 ~~ilviGaG~Vg~~va~~la~~~d~~V~iAdRs~~~~~~i~~~~~~~v~~~~vD~~d~~al~~li~~~d~VIn~~p~~~~   81 (389)
T COG1748           2 MKILVIGAGGVGSVVAHKLAQNGDGEVTIADRSKEKCARIAELIGGKVEALQVDAADVDALVALIKDFDLVINAAPPFVD   81 (389)
T ss_pred             CcEEEECCchhHHHHHHHHHhCCCceEEEEeCCHHHHHHHHhhccccceeEEecccChHHHHHHHhcCCEEEEeCCchhh
Confidence            46999999999999999988888 699999999888877754432  2 3466777877787887888999999998776


Q ss_pred             HHHHHhccccCCEEEEecCCCCC
Q 018067          261 LMPLIGLLKSQGKLVLVGAPEKP  283 (361)
Q Consensus       261 ~~~~~~~l~~~G~~v~~g~~~~~  283 (361)
                      +...-.+++.+=.++.+......
T Consensus        82 ~~i~ka~i~~gv~yvDts~~~~~  104 (389)
T COG1748          82 LTILKACIKTGVDYVDTSYYEEP  104 (389)
T ss_pred             HHHHHHHHHhCCCEEEcccCCch
Confidence            65565677777788887765443

>PF00670 AdoHcyase_NAD: S-adenosyl-L-homocysteine hydrolase, NAD binding domain; InterPro: IPR015878 S-adenosyl-L-homocysteine hydrolase (3

Probab=97.58  E-value=0.001  Score=54.19  Aligned_cols=99  Identities=19%  Similarity=0.277  Sum_probs=67.6

Q ss_pred             CCCCCCCEEEEEcCChHHHHHHHHHHHcCCeEEEEeCCchhHHHHHHHcCCCEEecCCCHHHHHHhcCCccEEEEcCCCc
Q 018067          179 GLDKPGMHVGVVGLGGLGHVAVKFAKAMGVKVTVISTSPSKKSEAIERLGADSFLVSRDQDEMQAAMGTMDGIIDTVSAV  258 (361)
Q Consensus       179 ~~~~~g~~vlV~Gag~vG~~a~~la~~~g~~vi~~~~~~~~~~~~~~~~g~~~vv~~~~~~~~~~~~~g~d~vid~~g~~  258 (361)
                      ...-.|++++|+|-|.+|.-.++.++.+|++|+++...+-+..++. .-|....       .+.++....|++|.++|..
T Consensus        18 ~~~l~Gk~vvV~GYG~vG~g~A~~lr~~Ga~V~V~e~DPi~alqA~-~dGf~v~-------~~~~a~~~adi~vtaTG~~   89 (162)
T PF00670_consen   18 NLMLAGKRVVVIGYGKVGKGIARALRGLGARVTVTEIDPIRALQAA-MDGFEVM-------TLEEALRDADIFVTATGNK   89 (162)
T ss_dssp             -S--TTSEEEEE--SHHHHHHHHHHHHTT-EEEEE-SSHHHHHHHH-HTT-EEE--------HHHHTTT-SEEEE-SSSS
T ss_pred             ceeeCCCEEEEeCCCcccHHHHHHHhhCCCEEEEEECChHHHHHhh-hcCcEec-------CHHHHHhhCCEEEECCCCc
Confidence            3346899999999999999999999999999999999887665553 3354321       2445566899999999987


Q ss_pred             ccH-HHHHhccccCCEEEEecCCCCCcc
Q 018067          259 HPL-MPLIGLLKSQGKLVLVGAPEKPLE  285 (361)
Q Consensus       259 ~~~-~~~~~~l~~~G~~v~~g~~~~~~~  285 (361)
                      ..+ ..-++.|+++..++.+|..+..+.
T Consensus        90 ~vi~~e~~~~mkdgail~n~Gh~d~Eid  117 (162)
T PF00670_consen   90 DVITGEHFRQMKDGAILANAGHFDVEID  117 (162)
T ss_dssp             SSB-HHHHHHS-TTEEEEESSSSTTSBT
T ss_pred             cccCHHHHHHhcCCeEEeccCcCceeEe
Confidence            643 477888999999999987544433

3.1.1 from EC) (AdoHcyase) is an enzyme of the activated methyl cycle, responsible for the reversible hydration of S-adenosyl-L-homocysteine into adenosine and homocysteine. AdoHcyase is an ubiquitous enzyme which binds and requires NAD+ as a cofactor. AdoHcyase is a highly conserved protein [] of about 430 to 470 amino acids. This entry represents the glycine-rich region in the central part of AdoHcyase, which is thought to be involved in NAD-binding.; GO: 0004013 adenosylhomocysteinase activity; PDB: 2ZJ1_C 3DHY_B 2ZIZ_C 2ZJ0_D 3CE6_B 3GLQ_B 3D64_A 3G1U_C 1A7A_A 3NJ4_C ....

>PF11017 DUF2855: Protein of unknown function (DUF2855); InterPro: IPR021276 This family of proteins has no known function

Probab=97.54  E-value=0.0026  Score=57.60  Aligned_cols=158  Identities=20%  Similarity=0.060  Sum_probs=94.9

Q ss_pred             CCCEEEEEcC-ChHHHHHHHHHH-Hc-CCeEEEEeCCchhHHHHHHHcCC-CEEecCCCHHHHHHhc-CCccEEEEcCCC
Q 018067          183 PGMHVGVVGL-GGLGHVAVKFAK-AM-GVKVTVISTSPSKKSEAIERLGA-DSFLVSRDQDEMQAAM-GTMDGIIDTVSA  257 (361)
Q Consensus       183 ~g~~vlV~Ga-g~vG~~a~~la~-~~-g~~vi~~~~~~~~~~~~~~~~g~-~~vv~~~~~~~~~~~~-~g~d~vid~~g~  257 (361)
                      ..+.|+|.+| +.+++..+..++ .. +.+++.+++...  ....+.+|+ +.++.|++-   ..+. ...-+++|+.|+
T Consensus       135 ga~~vvl~SASSKTA~glA~~L~~~~~~~~~vglTS~~N--~~Fve~lg~Yd~V~~Yd~i---~~l~~~~~~v~VDfaG~  209 (314)
T PF11017_consen  135 GAAQVVLSSASSKTAIGLAYCLKKQRGPPKVVGLTSARN--VAFVESLGCYDEVLTYDDI---DSLDAPQPVVIVDFAGN  209 (314)
T ss_pred             CccEEEEeccchHHHHHHHHHhhccCCCceEEEEecCcc--hhhhhccCCceEEeehhhh---hhccCCCCEEEEECCCC
Confidence            4466777777 889999999998 44 458888776643  346688886 778888663   3442 456788999999


Q ss_pred             cccHHHHHhccccCC-EEEEecCCCCC-------------cccChHHHHhCCcEEEecccCCHHHHHHHHHHHHcCCCce
Q 018067          258 VHPLMPLIGLLKSQG-KLVLVGAPEKP-------------LELPAFSLLMGRKIVGGSMIGGMKETQEMIDFAAKHNIRA  323 (361)
Q Consensus       258 ~~~~~~~~~~l~~~G-~~v~~g~~~~~-------------~~~~~~~~~~~~~~i~g~~~~~~~~~~~~~~ll~~~~~~~  323 (361)
                      .......-+.++..= ..+.+|...-.             .-|.....+.|++.-.|......+.-+...++++...-..
T Consensus       210 ~~~~~~Lh~~l~d~l~~~~~VG~th~~~~~~~~~l~g~~~~~FFAp~~~~kr~~~~G~~~~~~r~~~aw~~f~~~~~~wl  289 (314)
T PF11017_consen  210 GEVLAALHEHLGDNLVYSCLVGATHWDKVEAPADLPGPRPEFFFAPDQIDKRIKEWGAAEFFQRMAAAWKRFAADAQPWL  289 (314)
T ss_pred             HHHHHHHHHHHhhhhhEEEEEEccCccccCccccCCCCCcEEEeChHHHHHHHHHhCHHHHHHHHHHHHHHHHHhhcCcE
Confidence            886666666665543 56677753211             1122223333444333333222222222223333332112


Q ss_pred             eE-EEEecccHHHHHHHHHcCCC
Q 018067          324 DI-EVIPADYVNTALERLAKADV  345 (361)
Q Consensus       324 ~~-~~~~l~~~~~a~~~~~~~~~  345 (361)
                      .+ +..+.+.++++++.+.+|+.
T Consensus       290 ~~~~~~G~ea~~~~y~~l~~G~v  312 (314)
T PF11017_consen  290 KVEEVAGPEAVEAAYQDLLAGKV  312 (314)
T ss_pred             EEEEecCHHHHHHHHHHHhcCCC
Confidence            23 78899999999999998874

>KOG1209 consensus 1-Acyl dihydroxyacetone phosphate reductase and related dehydrogenases [Secondary metabolites biosynthesis, transport and catabolism]

Probab=97.49  E-value=0.0014  Score=55.32  Aligned_cols=105  Identities=18%  Similarity=0.217  Sum_probs=74.8

Q ss_pred             CCCCEEEEEcC--ChHHHHHHHHHHHcCCeEEEEeCCchhHHHHHHHcCCC-EEecCCCHHHHHHh-------c-CCccE
Q 018067          182 KPGMHVGVVGL--GGLGHVAVKFAKAMGVKVTVISTSPSKKSEAIERLGAD-SFLVSRDQDEMQAA-------M-GTMDG  250 (361)
Q Consensus       182 ~~g~~vlV~Ga--g~vG~~a~~la~~~g~~vi~~~~~~~~~~~~~~~~g~~-~vv~~~~~~~~~~~-------~-~g~d~  250 (361)
                      .....|||.|+  |+||.+.+.-...-|+.|+++++..++...+..++|.. .-+|-.+++.+.+.       + +..|+
T Consensus         5 ~~~k~VlItgcs~GGIG~ala~ef~~~G~~V~AtaR~~e~M~~L~~~~gl~~~kLDV~~~~~V~~v~~evr~~~~Gkld~   84 (289)
T KOG1209|consen    5 SQPKKVLITGCSSGGIGYALAKEFARNGYLVYATARRLEPMAQLAIQFGLKPYKLDVSKPEEVVTVSGEVRANPDGKLDL   84 (289)
T ss_pred             cCCCeEEEeecCCcchhHHHHHHHHhCCeEEEEEccccchHhhHHHhhCCeeEEeccCChHHHHHHHHHHhhCCCCceEE
Confidence            34577999874  99999999888899999999999999999998788863 33455555544332       2 36899


Q ss_pred             EEEcCCCccc------------------------HHHHH--hccccCCEEEEecCCCCCccc
Q 018067          251 IIDTVSAVHP------------------------LMPLI--GLLKSQGKLVLVGAPEKPLEL  286 (361)
Q Consensus       251 vid~~g~~~~------------------------~~~~~--~~l~~~G~~v~~g~~~~~~~~  286 (361)
                      .++.+|.+-+                        +..++  .+.+..|+++.+|+..+-..+
T Consensus        85 L~NNAG~~C~~Pa~d~~i~ave~~f~vNvfG~irM~~a~~h~likaKGtIVnvgSl~~~vpf  146 (289)
T KOG1209|consen   85 LYNNAGQSCTFPALDATIAAVEQCFKVNVFGHIRMCRALSHFLIKAKGTIVNVGSLAGVVPF  146 (289)
T ss_pred             EEcCCCCCcccccccCCHHHHHhhhccceeeeehHHHHHHHHHHHccceEEEecceeEEecc
Confidence            9998885310                        11122  244788999999986543333

>PF13460 NAD_binding_10: NADH(P)-binding ; PDB: 3OH8_A 3E8X_A 3GPI_A 3QVO_A 2Q46_B 1YBM_B 1XQ6_B 2Q4B_B 3EW7_A 3IUS_B

Probab=97.45  E-value=0.00065  Score=57.09  Aligned_cols=91  Identities=25%  Similarity=0.306  Sum_probs=67.6

Q ss_pred             EEEEcC-ChHHHHHHHHHHHcCCeEEEEeCCchhHHHHHHHcCCCE-EecCCCHHHHHHhcCCccEEEEcCCCcc----c
Q 018067          187 VGVVGL-GGLGHVAVKFAKAMGVKVTVISTSPSKKSEAIERLGADS-FLVSRDQDEMQAAMGTMDGIIDTVSAVH----P  260 (361)
Q Consensus       187 vlV~Ga-g~vG~~a~~la~~~g~~vi~~~~~~~~~~~~~~~~g~~~-vv~~~~~~~~~~~~~g~d~vid~~g~~~----~  260 (361)
                      |+|+|+ |.+|...++.+...|.+|++++|++++...   ..+.+. ..|..+.+.+.+...++|.||.++|...    .
T Consensus         1 I~V~GatG~vG~~l~~~L~~~~~~V~~~~R~~~~~~~---~~~~~~~~~d~~d~~~~~~al~~~d~vi~~~~~~~~~~~~   77 (183)
T PF13460_consen    1 ILVFGATGFVGRALAKQLLRRGHEVTALVRSPSKAED---SPGVEIIQGDLFDPDSVKAALKGADAVIHAAGPPPKDVDA   77 (183)
T ss_dssp             EEEETTTSHHHHHHHHHHHHTTSEEEEEESSGGGHHH---CTTEEEEESCTTCHHHHHHHHTTSSEEEECCHSTTTHHHH
T ss_pred             eEEECCCChHHHHHHHHHHHCCCEEEEEecCchhccc---ccccccceeeehhhhhhhhhhhhcchhhhhhhhhcccccc
Confidence            789998 999999999999999999999999887654   334443 2355667777777779999999998422    2


Q ss_pred             HHHHHhccccCC--EEEEecCC
Q 018067          261 LMPLIGLLKSQG--KLVLVGAP  280 (361)
Q Consensus       261 ~~~~~~~l~~~G--~~v~~g~~  280 (361)
                      ....++.++..|  +++.++..
T Consensus        78 ~~~~~~a~~~~~~~~~v~~s~~   99 (183)
T PF13460_consen   78 AKNIIEAAKKAGVKRVVYLSSA   99 (183)
T ss_dssp             HHHHHHHHHHTTSSEEEEEEET
T ss_pred             cccccccccccccccceeeecc
Confidence            445555554444  78877653

...

>PF02826 2-Hacid_dh_C: D-isomer specific 2-hydroxyacid dehydrogenase, NAD binding domain; InterPro: IPR006140 A number of NAD-dependent 2-hydroxyacid dehydrogenases which seem to be specific for the D-isomer of their substrate have been shown to be functionally and structurally related

Probab=97.44  E-value=0.0007  Score=56.88  Aligned_cols=119  Identities=19%  Similarity=0.314  Sum_probs=78.8

Q ss_pred             CCCCEEEEEcCChHHHHHHHHHHHcCCeEEEEeCCchhHHHHHHHcCCCEEecCCCHHHHHHhcCCccEEEEcCCCc---
Q 018067          182 KPGMHVGVVGLGGLGHVAVKFAKAMGVKVTVISTSPSKKSEAIERLGADSFLVSRDQDEMQAAMGTMDGIIDTVSAV---  258 (361)
Q Consensus       182 ~~g~~vlV~Gag~vG~~a~~la~~~g~~vi~~~~~~~~~~~~~~~~g~~~vv~~~~~~~~~~~~~g~d~vid~~g~~---  258 (361)
                      -.|++|.|+|.|.||+.+++.++.+|++|++.++........ ...+..    ..+   +.++....|+|+.+....   
T Consensus        34 l~g~tvgIiG~G~IG~~vA~~l~~fG~~V~~~d~~~~~~~~~-~~~~~~----~~~---l~ell~~aDiv~~~~plt~~T  105 (178)
T PF02826_consen   34 LRGKTVGIIGYGRIGRAVARRLKAFGMRVIGYDRSPKPEEGA-DEFGVE----YVS---LDELLAQADIVSLHLPLTPET  105 (178)
T ss_dssp             STTSEEEEESTSHHHHHHHHHHHHTT-EEEEEESSCHHHHHH-HHTTEE----ESS---HHHHHHH-SEEEE-SSSSTTT
T ss_pred             cCCCEEEEEEEcCCcCeEeeeeecCCceeEEecccCChhhhc-ccccce----eee---hhhhcchhhhhhhhhcccccc
Confidence            469999999999999999999999999999999988754422 344432    112   233344589998877631   


Q ss_pred             --ccHHHHHhccccCCEEEEecCCCCCcccChHHHHhCCcEEEecccCCHHHHHHHHHHHHcCCCceeE-EEEeccc
Q 018067          259 --HPLMPLIGLLKSQGKLVLVGAPEKPLELPAFSLLMGRKIVGGSMIGGMKETQEMIDFAAKHNIRADI-EVIPADY  332 (361)
Q Consensus       259 --~~~~~~~~~l~~~G~~v~~g~~~~~~~~~~~~~~~~~~~i~g~~~~~~~~~~~~~~ll~~~~~~~~~-~~~~l~~  332 (361)
                        ..-...++.++++..+|.++..+                        .-+-+.+++.+++|++..-. ++|.-+.
T Consensus       106 ~~li~~~~l~~mk~ga~lvN~aRG~------------------------~vde~aL~~aL~~g~i~ga~lDV~~~EP  158 (178)
T PF02826_consen  106 RGLINAEFLAKMKPGAVLVNVARGE------------------------LVDEDALLDALESGKIAGAALDVFEPEP  158 (178)
T ss_dssp             TTSBSHHHHHTSTTTEEEEESSSGG------------------------GB-HHHHHHHHHTTSEEEEEESS-SSSS
T ss_pred             ceeeeeeeeeccccceEEEeccchh------------------------hhhhhHHHHHHhhccCceEEEECCCCCC
Confidence              22346788889999998887521                        11455677888888877433 4544443

All contain a glycine-rich region located in the central section of these enzymes, this region corresponds to the NAD-binding domain. The catalytic domain is described in IPR006139 from INTERPRO ; GO: 0016616 oxidoreductase activity, acting on the CH-OH group of donors, NAD or NADP as acceptor, 0048037 cofactor binding, 0055114 oxidation-reduction process; PDB: 3JTM_A 3NAQ_B 3N7U_J 3KB6_B 3GG9_A 1QP8_B 2CUK_C 2W2L_D 2W2K_A 1WWK_A ....

>PRK05786 fabG 3-ketoacyl-(acyl-carrier-protein) reductase; Provisional

Probab=97.44  E-value=0.0013  Score=57.63  Aligned_cols=98  Identities=22%  Similarity=0.348  Sum_probs=67.4

Q ss_pred             CCCEEEEEcC-ChHHHHHHHHHHHcCCeEEEEeCCchhHHHHHHHcC---CCEE--ecCCCHHHHHHh-------cCCcc
Q 018067          183 PGMHVGVVGL-GGLGHVAVKFAKAMGVKVTVISTSPSKKSEAIERLG---ADSF--LVSRDQDEMQAA-------MGTMD  249 (361)
Q Consensus       183 ~g~~vlV~Ga-g~vG~~a~~la~~~g~~vi~~~~~~~~~~~~~~~~g---~~~v--v~~~~~~~~~~~-------~~g~d  249 (361)
                      .+++|+|.|+ |.+|..+++.+...|++|+.+++++++...+.+++.   ....  .|..+.+.+..+       .+++|
T Consensus         4 ~~~~vlItGa~g~iG~~~a~~l~~~G~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~Dl~~~~~~~~~~~~~~~~~~~id   83 (238)
T PRK05786          4 KGKKVAIIGVSEGLGYAVAYFALKEGAQVCINSRNENKLKRMKKTLSKYGNIHYVVGDVSSTESARNVIEKAAKVLNAID   83 (238)
T ss_pred             CCcEEEEECCCchHHHHHHHHHHHCCCEEEEEeCCHHHHHHHHHHHHhcCCeEEEECCCCCHHHHHHHHHHHHHHhCCCC
Confidence            4689999998 999999999999999999999998877655534332   1122  234444333221       24689


Q ss_pred             EEEEcCCCcc-----------------------cHHHHHhccccCCEEEEecCC
Q 018067          250 GIIDTVSAVH-----------------------PLMPLIGLLKSQGKLVLVGAP  280 (361)
Q Consensus       250 ~vid~~g~~~-----------------------~~~~~~~~l~~~G~~v~~g~~  280 (361)
                      .++.++|...                       .++..+..++++|+++.++..
T Consensus        84 ~ii~~ag~~~~~~~~~~~~~~~~~~~n~~~~~~~~~~~~~~~~~~~~iv~~ss~  137 (238)
T PRK05786         84 GLVVTVGGYVEDTVEEFSGLEEMLTNHIKIPLYAVNASLRFLKEGSSIVLVSSM  137 (238)
T ss_pred             EEEEcCCCcCCCchHHHHHHHHHHHHhchHHHHHHHHHHHHHhcCCEEEEEecc
Confidence            9999987521                       133445556678999999865

>cd01080 NAD_bind_m-THF_DH_Cyclohyd NADP binding domain of methylene-tetrahydrofolate dehydrogenase/cyclohydrolase

Probab=97.44  E-value=0.0023  Score=53.00  Aligned_cols=98  Identities=20%  Similarity=0.259  Sum_probs=70.5

Q ss_pred             ccccchhhhhhhhHhhhcCCCCCCCEEEEEcCCh-HHHHHHHHHHHcCCeEEEEeCCchhHHHHHHHcCCCEEecCCCHH
Q 018067          161 TAPLLCAGITVYSPLRFYGLDKPGMHVGVVGLGG-LGHVAVKFAKAMGVKVTVISTSPSKKSEAIERLGADSFLVSRDQD  239 (361)
Q Consensus       161 aa~l~~~~~ta~~~l~~~~~~~~g~~vlV~Gag~-vG~~a~~la~~~g~~vi~~~~~~~~~~~~~~~~g~~~vv~~~~~~  239 (361)
                      ....||...++...++....--.|.+|+|+|+|. +|..++..++..|++|+++.+..+++                   
T Consensus        21 ~~~~p~~~~a~v~l~~~~~~~l~gk~vlViG~G~~~G~~~a~~L~~~g~~V~v~~r~~~~l-------------------   81 (168)
T cd01080          21 PGFIPCTPAGILELLKRYGIDLAGKKVVVVGRSNIVGKPLAALLLNRNATVTVCHSKTKNL-------------------   81 (168)
T ss_pred             CCccCChHHHHHHHHHHcCCCCCCCEEEEECCcHHHHHHHHHHHhhCCCEEEEEECCchhH-------------------
Confidence            3455666666666666665446899999999986 59999999999999988887763222                   


Q ss_pred             HHHHhcCCccEEEEcCCCcccHHHHHhccccCCEEEEecCCC
Q 018067          240 EMQAAMGTMDGIIDTVSAVHPLMPLIGLLKSQGKLVLVGAPE  281 (361)
Q Consensus       240 ~~~~~~~g~d~vid~~g~~~~~~~~~~~l~~~G~~v~~g~~~  281 (361)
                        .+....+|+||.+++.++.+..  +.++++-.+++++.+.
T Consensus        82 --~~~l~~aDiVIsat~~~~ii~~--~~~~~~~viIDla~pr  119 (168)
T cd01080          82 --KEHTKQADIVIVAVGKPGLVKG--DMVKPGAVVIDVGINR  119 (168)
T ss_pred             --HHHHhhCCEEEEcCCCCceecH--HHccCCeEEEEccCCC
Confidence              2333468999999999773333  3567777778888754

NADP binding domain of the Methylene-Tetrahydrofolate Dehydrogenase/cyclohydrolase (m-THF DH/cyclohydrolase) bifunctional enzyme. Tetrahydrofolate is a versatile carrier of activated one-carbon units. The major one-carbon folate donors are N-5 methyltetrahydrofolate, N5,N10-m-THF, and N10-formayltetrahydrofolate. The oxidation of metabolic intermediate m-THF to m-THF requires the enzyme m-THF DH. In addition, most DHs also have an associated cyclohydrolase activity which catalyzes its hydrolysis to N10-formyltetrahydrofolate. m-THF DH is typically found as part of a multifunctional protein in eukaryotes. NADP-dependent m-THF DH in mammals, birds and yeast are components of a trifunctional enzyme with DH, cyclohydrolase, and synthetase activities. Certain eukaryotic cells also contain homodimeric bifunctional DH/cyclodrolase form. In bacteria, monofucntional DH, as well a

>PRK14175 bifunctional 5,10-methylene-tetrahydrofolate dehydrogenase/ 5,10-methylene-tetrahydrofolate cyclohydrolase; Provisional

Probab=97.42  E-value=0.0018  Score=58.17  Aligned_cols=97  Identities=18%  Similarity=0.289  Sum_probs=75.2

Q ss_pred             cccchhhhhhhhHhhhcCCCCCCCEEEEEcCCh-HHHHHHHHHHHcCCeEEEEeCCchhHHHHHHHcCCCEEecCCCHHH
Q 018067          162 APLLCAGITVYSPLRFYGLDKPGMHVGVVGLGG-LGHVAVKFAKAMGVKVTVISTSPSKKSEAIERLGADSFLVSRDQDE  240 (361)
Q Consensus       162 a~l~~~~~ta~~~l~~~~~~~~g~~vlV~Gag~-vG~~a~~la~~~g~~vi~~~~~~~~~~~~~~~~g~~~vv~~~~~~~  240 (361)
                      ..+||+..+.+..+++..---.|++|+|+|.|. +|.-++.++...|++|+++.+...                     .
T Consensus       136 ~~~PcTp~ai~~ll~~~~i~l~Gk~vvVIGrs~~VG~pla~lL~~~gatVtv~~s~t~---------------------~  194 (286)
T PRK14175        136 TFVPCTPLGIMEILKHADIDLEGKNAVVIGRSHIVGQPVSKLLLQKNASVTILHSRSK---------------------D  194 (286)
T ss_pred             CCCCCcHHHHHHHHHHcCCCCCCCEEEEECCCchhHHHHHHHHHHCCCeEEEEeCCch---------------------h
Confidence            356777777777787766446899999999855 999999999999999998876432                     1


Q ss_pred             HHHhcCCccEEEEcCCCcccHHHHHhccccCCEEEEecCCC
Q 018067          241 MQAAMGTMDGIIDTVSAVHPLMPLIGLLKSQGKLVLVGAPE  281 (361)
Q Consensus       241 ~~~~~~g~d~vid~~g~~~~~~~~~~~l~~~G~~v~~g~~~  281 (361)
                      +.+....+|+||.++|.+..+..  +.++++..++.+|...
T Consensus       195 l~~~~~~ADIVIsAvg~p~~i~~--~~vk~gavVIDvGi~~  233 (286)
T PRK14175        195 MASYLKDADVIVSAVGKPGLVTK--DVVKEGAVIIDVGNTP  233 (286)
T ss_pred             HHHHHhhCCEEEECCCCCcccCH--HHcCCCcEEEEcCCCc
Confidence            23344568999999999874444  5689999999999754

>PRK06182 short chain dehydrogenase; Validated

Probab=97.36  E-value=0.0024  Score=57.39  Aligned_cols=74  Identities=22%  Similarity=0.275  Sum_probs=54.4

Q ss_pred             CCCEEEEEcC-ChHHHHHHHHHHHcCCeEEEEeCCchhHHHHHHHcCCCE-EecCCCHHHHHHh-------cCCccEEEE
Q 018067          183 PGMHVGVVGL-GGLGHVAVKFAKAMGVKVTVISTSPSKKSEAIERLGADS-FLVSRDQDEMQAA-------MGTMDGIID  253 (361)
Q Consensus       183 ~g~~vlV~Ga-g~vG~~a~~la~~~g~~vi~~~~~~~~~~~~~~~~g~~~-vv~~~~~~~~~~~-------~~g~d~vid  253 (361)
                      ++++++|.|+ |.+|..+++.+...|++|++++++.++...+. ..+... ..|..+.+.+..+       .+++|++|+
T Consensus         2 ~~k~vlItGasggiG~~la~~l~~~G~~V~~~~r~~~~l~~~~-~~~~~~~~~Dv~~~~~~~~~~~~~~~~~~~id~li~   80 (273)
T PRK06182          2 QKKVALVTGASSGIGKATARRLAAQGYTVYGAARRVDKMEDLA-SLGVHPLSLDVTDEASIKAAVDTIIAEEGRIDVLVN   80 (273)
T ss_pred             CCCEEEEECCCChHHHHHHHHHHHCCCEEEEEeCCHHHHHHHH-hCCCeEEEeeCCCHHHHHHHHHHHHHhcCCCCEEEE
Confidence            3578999997 99999999999999999999999887765553 334432 3355565444332       247999999


Q ss_pred             cCCC
Q 018067          254 TVSA  257 (361)
Q Consensus       254 ~~g~  257 (361)
                      ++|.
T Consensus        81 ~ag~   84 (273)
T PRK06182         81 NAGY   84 (273)
T ss_pred             CCCc
Confidence            9984

>KOG1205 consensus Predicted dehydrogenase [Secondary metabolites biosynthesis, transport and catabolism]

Probab=97.35  E-value=0.0016  Score=58.16  Aligned_cols=105  Identities=18%  Similarity=0.338  Sum_probs=71.5

Q ss_pred             CCCEEEEEcC-ChHHHHHHHHHHHcCCeEEEEeCCchhHHHHHH---HcCCCE-E----ecCCCHHHHH-------HhcC
Q 018067          183 PGMHVGVVGL-GGLGHVAVKFAKAMGVKVTVISTSPSKKSEAIE---RLGADS-F----LVSRDQDEMQ-------AAMG  246 (361)
Q Consensus       183 ~g~~vlV~Ga-g~vG~~a~~la~~~g~~vi~~~~~~~~~~~~~~---~~g~~~-v----v~~~~~~~~~-------~~~~  246 (361)
                      .|+.|+|.|| ++||.+.+.-+-..|++++.+++..++.+.+++   +.+... +    .|-.+.+.+.       ...+
T Consensus        11 ~~kvVvITGASsGIG~~lA~~la~~G~~l~lvar~~rrl~~v~~~l~~~~~~~~v~~~~~Dvs~~~~~~~~~~~~~~~fg   90 (282)
T KOG1205|consen   11 AGKVVLITGASSGIGEALAYELAKRGAKLVLVARRARRLERVAEELRKLGSLEKVLVLQLDVSDEESVKKFVEWAIRHFG   90 (282)
T ss_pred             CCCEEEEeCCCcHHHHHHHHHHHhCCCceEEeehhhhhHHHHHHHHHHhCCcCccEEEeCccCCHHHHHHHHHHHHHhcC
Confidence            5788999998 999999999999999999999988877665533   333322 1    2334444333       2235


Q ss_pred             CccEEEEcCCCcc-------------------------cHHHHHhcccc-C-CEEEEecCCCCCcccC
Q 018067          247 TMDGIIDTVSAVH-------------------------PLMPLIGLLKS-Q-GKLVLVGAPEKPLELP  287 (361)
Q Consensus       247 g~d~vid~~g~~~-------------------------~~~~~~~~l~~-~-G~~v~~g~~~~~~~~~  287 (361)
                      ++|+.++++|-..                         ....++..|++ + |+++.+++..+...++
T Consensus        91 ~vDvLVNNAG~~~~~~~~~~~~~~~~~~mdtN~~G~V~~Tk~alp~m~~r~~GhIVvisSiaG~~~~P  158 (282)
T KOG1205|consen   91 RVDVLVNNAGISLVGFLEDTDIEDVRNVMDTNVFGTVYLTKAALPSMKKRNDGHIVVISSIAGKMPLP  158 (282)
T ss_pred             CCCEEEecCccccccccccCcHHHHHHHhhhhchhhHHHHHHHHHHhhhcCCCeEEEEeccccccCCC
Confidence            8999999998421                         23446666643 3 9999998876544333

>COG0686 Ald Alanine dehydrogenase [Amino acid transport and metabolism]

Probab=97.35  E-value=0.0013  Score=58.68  Aligned_cols=98  Identities=20%  Similarity=0.249  Sum_probs=81.2

Q ss_pred             CCEEEEEcCChHHHHHHHHHHHcCCeEEEEeCCchhHHHHHHHcCCCEEecCCCHHHHHHhcCCccEEEEcC---CC--c
Q 018067          184 GMHVGVVGLGGLGHVAVKFAKAMGVKVTVISTSPSKKSEAIERLGADSFLVSRDQDEMQAAMGTMDGIIDTV---SA--V  258 (361)
Q Consensus       184 g~~vlV~Gag~vG~~a~~la~~~g~~vi~~~~~~~~~~~~~~~~g~~~vv~~~~~~~~~~~~~g~d~vid~~---g~--~  258 (361)
                      ..+|.|+|+|.+|.-++.+|.-+|++|.+.+.+.+|++.+...|+.+...-++++..+++.-.+.|++|.++   |.  +
T Consensus       168 ~~kv~iiGGGvvgtnaAkiA~glgA~Vtild~n~~rl~~ldd~f~~rv~~~~st~~~iee~v~~aDlvIgaVLIpgakaP  247 (371)
T COG0686         168 PAKVVVLGGGVVGTNAAKIAIGLGADVTILDLNIDRLRQLDDLFGGRVHTLYSTPSNIEEAVKKADLVIGAVLIPGAKAP  247 (371)
T ss_pred             CccEEEECCccccchHHHHHhccCCeeEEEecCHHHHhhhhHhhCceeEEEEcCHHHHHHHhhhccEEEEEEEecCCCCc
Confidence            355899999999999999999999999999999999999977788775556788888888888999998864   22  1


Q ss_pred             -ccHHHHHhccccCCEEEEecCCC
Q 018067          259 -HPLMPLIGLLKSQGKLVLVGAPE  281 (361)
Q Consensus       259 -~~~~~~~~~l~~~G~~v~~g~~~  281 (361)
                       ...+..++.|+|++-++++....
T Consensus       248 kLvt~e~vk~MkpGsVivDVAiDq  271 (371)
T COG0686         248 KLVTREMVKQMKPGSVIVDVAIDQ  271 (371)
T ss_pred             eehhHHHHHhcCCCcEEEEEEEcC
Confidence             23567789999999999997643

>cd01078 NAD_bind_H4MPT_DH NADP binding domain of methylene tetrahydromethanopterin dehydrogenase

Probab=97.31  E-value=0.004  Score=53.05  Aligned_cols=100  Identities=19%  Similarity=0.188  Sum_probs=65.9

Q ss_pred             CCCCEEEEEcC-ChHHHHHHHHHHHcCCeEEEEeCCchhHHHHHHHcC----CC-EEecCCCHHHHHHhcCCccEEEEcC
Q 018067          182 KPGMHVGVVGL-GGLGHVAVKFAKAMGVKVTVISTSPSKKSEAIERLG----AD-SFLVSRDQDEMQAAMGTMDGIIDTV  255 (361)
Q Consensus       182 ~~g~~vlV~Ga-g~vG~~a~~la~~~g~~vi~~~~~~~~~~~~~~~~g----~~-~vv~~~~~~~~~~~~~g~d~vid~~  255 (361)
                      -++.+++|+|+ |.+|..++..+...|++|+++.++.++...+++.+.    .. ...+..+.+.+.+...++|+||.+.
T Consensus        26 l~~~~vlVlGgtG~iG~~~a~~l~~~g~~V~l~~R~~~~~~~l~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~diVi~at  105 (194)
T cd01078          26 LKGKTAVVLGGTGPVGQRAAVLLAREGARVVLVGRDLERAQKAADSLRARFGEGVGAVETSDDAARAAAIKGADVVFAAG  105 (194)
T ss_pred             CCCCEEEEECCCCHHHHHHHHHHHHCCCEEEEEcCCHHHHHHHHHHHHhhcCCcEEEeeCCCHHHHHHHHhcCCEEEECC
Confidence            36789999997 999999999888889999999998887766655542    22 1223445555555556899999988


Q ss_pred             CCcccHHHHHh-ccccCCEEEEecCCC
Q 018067          256 SAVHPLMPLIG-LLKSQGKLVLVGAPE  281 (361)
Q Consensus       256 g~~~~~~~~~~-~l~~~G~~v~~g~~~  281 (361)
                      ........... ..+++--++++..++
T Consensus       106 ~~g~~~~~~~~~~~~~~~vv~D~~~~~  132 (194)
T cd01078         106 AAGVELLEKLAWAPKPLAVAADVNAVP  132 (194)
T ss_pred             CCCceechhhhcccCceeEEEEccCCC
Confidence            76552111222 223333466665543

Methylene Tetrahydromethanopterin Dehydrogenase (H4MPT DH) NADP binding domain. NADP-dependent H4MPT DH catalyzes the dehydrogenation of methylene- H4MPT and methylene-tetrahydrofolate (H4F) with NADP+ as cofactor. H4F and H4MPT are both cofactors that carry the one-carbon units between the formyl and methyl oxidation level. H4F and H4MPT are structurally analogous to each other with respect to the pterin moiety, but each has distinct side chain. H4MPT is present only in anaerobic methanogenic archaea and aerobic methylotrophic proteobacteria. H4MPT seems to have evolved independently from H4F and functions as a distinct carrier in C1 metabolism. Amino acid DH-like NAD(P)-binding domains are members of the Rossmann fold superfamily and include glutamate, leucine, and phenylalanine DHs, methylene tetrahydrofolate DH, methylene-tetrahydromethanopterin DH, methylene-tetrahydropholate DH/cyclo

>TIGR01318 gltD_gamma_fam glutamate synthase small subunit family protein, proteobacterial

Probab=97.29  E-value=0.00058  Score=66.47  Aligned_cols=78  Identities=22%  Similarity=0.378  Sum_probs=55.6

Q ss_pred             CCCCEEEEEcCChHHHHHHHHHHHcCCeEEEEeCCch--------------------hHHHHHHHcCCCEEecCCCH-H-
Q 018067          182 KPGMHVGVVGLGGLGHVAVKFAKAMGVKVTVISTSPS--------------------KKSEAIERLGADSFLVSRDQ-D-  239 (361)
Q Consensus       182 ~~g~~vlV~Gag~vG~~a~~la~~~g~~vi~~~~~~~--------------------~~~~~~~~~g~~~vv~~~~~-~-  239 (361)
                      +.+++|+|+|+|+.|+.++..++..|.+|+++...+.                    +..+..+++|++..++..-. + 
T Consensus       139 ~~~~~V~IIG~GpaGl~aA~~l~~~G~~V~i~e~~~~~gG~l~~gip~~~~~~~~~~~~~~~~~~~Gv~~~~~~~v~~~~  218 (467)
T TIGR01318       139 PTGKRVAVIGAGPAGLACADILARAGVQVVVFDRHPEIGGLLTFGIPSFKLDKAVLSRRREIFTAMGIEFHLNCEVGRDI  218 (467)
T ss_pred             CCCCeEEEECCCHHHHHHHHHHHHcCCeEEEEecCCCCCceeeecCccccCCHHHHHHHHHHHHHCCCEEECCCEeCCcc
Confidence            3688999999999999999999999999988876541                    22344467887654443211 1 


Q ss_pred             HHHHhcCCccEEEEcCCCcc
Q 018067          240 EMQAAMGTMDGIIDTVSAVH  259 (361)
Q Consensus       240 ~~~~~~~g~d~vid~~g~~~  259 (361)
                      .+..+..++|.||.++|...
T Consensus       219 ~~~~~~~~~D~vilAtGa~~  238 (467)
T TIGR01318       219 SLDDLLEDYDAVFLGVGTYR  238 (467)
T ss_pred             CHHHHHhcCCEEEEEeCCCC
Confidence            22333457999999999754

This model represents one of three built for the NADPH-dependent or NADH-dependent glutamate synthase (EC 1.4.1.13 and 1.4.1.14, respectively) small subunit and homologs. TIGR01317 describes the small subunit (or equivalent region from longer forms) in eukaryotes, Gram-positive bacteria, and some other lineages, both NADH and NADPH-dependent. TIGR01316 describes a protein of similar length, from Archaea and a number of bacterial lineages, that forms glutamate synthase homotetramers without a large subunit. This model describes both glutatate synthase small subunit and closely related paralogs of unknown function from a number of gamma and alpha subdivision Proteobacteria, including E. coli.

>cd01065 NAD_bind_Shikimate_DH NAD(P) binding domain of Shikimate dehydrogenase

Probab=97.28  E-value=0.0055  Score=50.00  Aligned_cols=104  Identities=23%  Similarity=0.278  Sum_probs=69.7

Q ss_pred             HhhhcCCCCCCCEEEEEcCChHHHHHHHHHHHcC-CeEEEEeCCchhHHHHHHHcCCCE-EecCCCHHHHHHhcCCccEE
Q 018067          174 PLRFYGLDKPGMHVGVVGLGGLGHVAVKFAKAMG-VKVTVISTSPSKKSEAIERLGADS-FLVSRDQDEMQAAMGTMDGI  251 (361)
Q Consensus       174 ~l~~~~~~~~g~~vlV~Gag~vG~~a~~la~~~g-~~vi~~~~~~~~~~~~~~~~g~~~-vv~~~~~~~~~~~~~g~d~v  251 (361)
                      ++.+...-..+.+++|+|+|.+|...++.+...| .+|++++++.++...++++++... .....+   ..+...++|+|
T Consensus         9 a~~~~~~~~~~~~i~iiG~G~~g~~~a~~l~~~g~~~v~v~~r~~~~~~~~~~~~~~~~~~~~~~~---~~~~~~~~Dvv   85 (155)
T cd01065           9 ALEEAGIELKGKKVLILGAGGAARAVAYALAELGAAKIVIVNRTLEKAKALAERFGELGIAIAYLD---LEELLAEADLI   85 (155)
T ss_pred             HHHhhCCCCCCCEEEEECCcHHHHHHHHHHHHCCCCEEEEEcCCHHHHHHHHHHHhhcccceeecc---hhhccccCCEE
Confidence            3444332245788999999999999999998886 689999998888777777776431 011112   12234689999


Q ss_pred             EEcCCCccc----HHHHHhccccCCEEEEecCC
Q 018067          252 IDTVSAVHP----LMPLIGLLKSQGKLVLVGAP  280 (361)
Q Consensus       252 id~~g~~~~----~~~~~~~l~~~G~~v~~g~~  280 (361)
                      +.+++....    .......++++..++.++..
T Consensus        86 i~~~~~~~~~~~~~~~~~~~~~~~~~v~D~~~~  118 (155)
T cd01065          86 INTTPVGMKPGDELPLPPSLLKPGGVVYDVVYN  118 (155)
T ss_pred             EeCcCCCCCCCCCCCCCHHHcCCCCEEEEcCcC
Confidence            999887541    11222346777788888664

Shikimate dehydrogenase (DH) is an amino acid DH family member. Shikimate pathway links metabolism of carbohydrates to de novo biosynthesis of aromatic amino acids, quinones and folate. It is essential in plants, bacteria, and fungi but absent in mammals, thus making enzymes involved in this pathway ideal targets for broad spectrum antibiotics and herbicides. Shikimate DH catalyzes the reduction of 3-hydroshikimate to shikimate using the cofactor NADH. Amino acid DH-like NAD(P)-binding domains are members of the Rossmann fold superfamily and include glutamate, leucine, and phenylalanine DHs, methylene tetrahydrofolate DH, methylene-tetrahydromethanopterin DH, methylene-tetrahydropholate DH/cyclohydrolase, Shikimate DH-like proteins, malate oxidoreductases, and glutamyl tRNA reductase. Amino acid DHs catalyze the deamination of amino acids to keto acids with NAD(P)+ as a cofactor. The NAD(P)-binding Rossmann

>PRK05693 short chain dehydrogenase; Provisional

Probab=97.28  E-value=0.0039  Score=56.05  Aligned_cols=72  Identities=19%  Similarity=0.231  Sum_probs=52.9

Q ss_pred             CEEEEEcC-ChHHHHHHHHHHHcCCeEEEEeCCchhHHHHHHHcCCCEE-ecCCCHHHHHHh-------cCCccEEEEcC
Q 018067          185 MHVGVVGL-GGLGHVAVKFAKAMGVKVTVISTSPSKKSEAIERLGADSF-LVSRDQDEMQAA-------MGTMDGIIDTV  255 (361)
Q Consensus       185 ~~vlV~Ga-g~vG~~a~~la~~~g~~vi~~~~~~~~~~~~~~~~g~~~v-v~~~~~~~~~~~-------~~g~d~vid~~  255 (361)
                      +++||.|+ |++|...++.+...|++|++++++.++...+ ...+...+ .|..+++.+.++       .+++|++|+++
T Consensus         2 k~vlItGasggiG~~la~~l~~~G~~V~~~~r~~~~~~~~-~~~~~~~~~~Dl~~~~~~~~~~~~~~~~~~~id~vi~~a   80 (274)
T PRK05693          2 PVVLITGCSSGIGRALADAFKAAGYEVWATARKAEDVEAL-AAAGFTAVQLDVNDGAALARLAEELEAEHGGLDVLINNA   80 (274)
T ss_pred             CEEEEecCCChHHHHHHHHHHHCCCEEEEEeCCHHHHHHH-HHCCCeEEEeeCCCHHHHHHHHHHHHHhcCCCCEEEECC
Confidence            46899997 9999999999999999999999887766555 33454332 466665444332       24799999999


Q ss_pred             CC
Q 018067          256 SA  257 (361)
Q Consensus       256 g~  257 (361)
                      |.
T Consensus        81 g~   82 (274)
T PRK05693         81 GY   82 (274)
T ss_pred             CC
Confidence            84

>PRK08265 short chain dehydrogenase; Provisional

Probab=97.28  E-value=0.004  Score=55.59  Aligned_cols=75  Identities=17%  Similarity=0.267  Sum_probs=56.1

Q ss_pred             CCCEEEEEcC-ChHHHHHHHHHHHcCCeEEEEeCCchhHHHHHHHcCCCE---EecCCCHHHHHHh-------cCCccEE
Q 018067          183 PGMHVGVVGL-GGLGHVAVKFAKAMGVKVTVISTSPSKKSEAIERLGADS---FLVSRDQDEMQAA-------MGTMDGI  251 (361)
Q Consensus       183 ~g~~vlV~Ga-g~vG~~a~~la~~~g~~vi~~~~~~~~~~~~~~~~g~~~---vv~~~~~~~~~~~-------~~g~d~v  251 (361)
                      .+++++|.|+ |.+|..++..+...|++|++++++.++..++.++++...   ..|..+++.+.++       .+.+|++
T Consensus         5 ~~k~vlItGas~gIG~~ia~~l~~~G~~V~~~~r~~~~~~~~~~~~~~~~~~~~~Dl~~~~~~~~~~~~~~~~~g~id~l   84 (261)
T PRK08265          5 AGKVAIVTGGATLIGAAVARALVAAGARVAIVDIDADNGAAVAASLGERARFIATDITDDAAIERAVATVVARFGRVDIL   84 (261)
T ss_pred             CCCEEEEECCCChHHHHHHHHHHHCCCEEEEEeCCHHHHHHHHHHhCCeeEEEEecCCCHHHHHHHHHHHHHHhCCCCEE
Confidence            4678999997 999999999999999999999998877777766666321   2355555433322       2468999


Q ss_pred             EEcCCC
Q 018067          252 IDTVSA  257 (361)
Q Consensus       252 id~~g~  257 (361)
                      |+++|.
T Consensus        85 v~~ag~   90 (261)
T PRK08265         85 VNLACT   90 (261)
T ss_pred             EECCCC
Confidence            999884

>PRK07109 short chain dehydrogenase; Provisional

Probab=97.28  E-value=0.0052  Score=57.12  Aligned_cols=75  Identities=19%  Similarity=0.306  Sum_probs=54.9

Q ss_pred             CCCEEEEEcC-ChHHHHHHHHHHHcCCeEEEEeCCchhHHHHHHH---cCCCE---EecCCCHHHHHHh-------cCCc
Q 018067          183 PGMHVGVVGL-GGLGHVAVKFAKAMGVKVTVISTSPSKKSEAIER---LGADS---FLVSRDQDEMQAA-------MGTM  248 (361)
Q Consensus       183 ~g~~vlV~Ga-g~vG~~a~~la~~~g~~vi~~~~~~~~~~~~~~~---~g~~~---vv~~~~~~~~~~~-------~~g~  248 (361)
                      .+++++|.|+ |++|..+++.+...|++|+++++++++.+++.++   .|.+.   ..|..+++.+..+       .+++
T Consensus         7 ~~k~vlITGas~gIG~~la~~la~~G~~Vvl~~R~~~~l~~~~~~l~~~g~~~~~v~~Dv~d~~~v~~~~~~~~~~~g~i   86 (334)
T PRK07109          7 GRQVVVITGASAGVGRATARAFARRGAKVVLLARGEEGLEALAAEIRAAGGEALAVVADVADAEAVQAAADRAEEELGPI   86 (334)
T ss_pred             CCCEEEEECCCCHHHHHHHHHHHHCCCEEEEEECCHHHHHHHHHHHHHcCCcEEEEEecCCCHHHHHHHHHHHHHHCCCC
Confidence            4678999998 9999999999999999999999988766555433   34432   2355555544432       2479


Q ss_pred             cEEEEcCCC
Q 018067          249 DGIIDTVSA  257 (361)
Q Consensus       249 d~vid~~g~  257 (361)
                      |++|+++|.
T Consensus        87 D~lInnAg~   95 (334)
T PRK07109         87 DTWVNNAMV   95 (334)
T ss_pred             CEEEECCCc
Confidence            999999985

>COG3967 DltE Short-chain dehydrogenase involved in D-alanine esterification of lipoteichoic acid and wall teichoic acid (D-alanine transfer protein) [Cell envelope biogenesis, outer membrane]

Probab=97.24  E-value=0.0014  Score=54.99  Aligned_cols=75  Identities=16%  Similarity=0.199  Sum_probs=56.6

Q ss_pred             CCCEEEEEcC-ChHHHHHHHHHHHcCCeEEEEeCCchhHHHHHHHcCC--CEEecCCCHHH----HHHhcC---CccEEE
Q 018067          183 PGMHVGVVGL-GGLGHVAVKFAKAMGVKVTVISTSPSKKSEAIERLGA--DSFLVSRDQDE----MQAAMG---TMDGII  252 (361)
Q Consensus       183 ~g~~vlV~Ga-g~vG~~a~~la~~~g~~vi~~~~~~~~~~~~~~~~g~--~~vv~~~~~~~----~~~~~~---g~d~vi  252 (361)
                      -|.+|||.|+ ++||+..++-....|-+||+..|+++++.+.......  ..+.|-.+.+.    +.++..   -.++++
T Consensus         4 tgnTiLITGG~sGIGl~lak~f~elgN~VIi~gR~e~~L~e~~~~~p~~~t~v~Dv~d~~~~~~lvewLkk~~P~lNvli   83 (245)
T COG3967           4 TGNTILITGGASGIGLALAKRFLELGNTVIICGRNEERLAEAKAENPEIHTEVCDVADRDSRRELVEWLKKEYPNLNVLI   83 (245)
T ss_pred             cCcEEEEeCCcchhhHHHHHHHHHhCCEEEEecCcHHHHHHHHhcCcchheeeecccchhhHHHHHHHHHhhCCchheee
Confidence            4789999876 9999999999999999999999999998888554442  34555555443    333332   589999


Q ss_pred             EcCCC
Q 018067          253 DTVSA  257 (361)
Q Consensus       253 d~~g~  257 (361)
                      +++|-
T Consensus        84 NNAGI   88 (245)
T COG3967          84 NNAGI   88 (245)
T ss_pred             ecccc
Confidence            99884

>PRK06139 short chain dehydrogenase; Provisional

Probab=97.22  E-value=0.0025  Score=59.14  Aligned_cols=75  Identities=21%  Similarity=0.336  Sum_probs=56.4

Q ss_pred             CCCEEEEEcC-ChHHHHHHHHHHHcCCeEEEEeCCchhHHHHHH---HcCCCE---EecCCCHHHHHHhc-------CCc
Q 018067          183 PGMHVGVVGL-GGLGHVAVKFAKAMGVKVTVISTSPSKKSEAIE---RLGADS---FLVSRDQDEMQAAM-------GTM  248 (361)
Q Consensus       183 ~g~~vlV~Ga-g~vG~~a~~la~~~g~~vi~~~~~~~~~~~~~~---~~g~~~---vv~~~~~~~~~~~~-------~g~  248 (361)
                      .++++||.|+ |++|.++++.+...|++|+++++++++.+++.+   ..|.+.   ..|..+.+.+.++.       +++
T Consensus         6 ~~k~vlITGAs~GIG~aia~~la~~G~~Vvl~~R~~~~l~~~~~~~~~~g~~~~~~~~Dv~d~~~v~~~~~~~~~~~g~i   85 (330)
T PRK06139          6 HGAVVVITGASSGIGQATAEAFARRGARLVLAARDEEALQAVAEECRALGAEVLVVPTDVTDADQVKALATQAASFGGRI   85 (330)
T ss_pred             CCCEEEEcCCCCHHHHHHHHHHHHCCCEEEEEECCHHHHHHHHHHHHhcCCcEEEEEeeCCCHHHHHHHHHHHHHhcCCC
Confidence            5688999998 999999999999999999999998877665544   335432   23555655444332       579


Q ss_pred             cEEEEcCCC
Q 018067          249 DGIIDTVSA  257 (361)
Q Consensus       249 d~vid~~g~  257 (361)
                      |++|+++|.
T Consensus        86 D~lVnnAG~   94 (330)
T PRK06139         86 DVWVNNVGV   94 (330)
T ss_pred             CEEEECCCc
Confidence            999999984

>PRK08339 short chain dehydrogenase; Provisional

Probab=97.22  E-value=0.0058  Score=54.72  Aligned_cols=75  Identities=15%  Similarity=0.227  Sum_probs=54.3

Q ss_pred             CCCEEEEEcC-ChHHHHHHHHHHHcCCeEEEEeCCchhHHHHHHHc----CCC---EEecCCCHHHHHHh------cCCc
Q 018067          183 PGMHVGVVGL-GGLGHVAVKFAKAMGVKVTVISTSPSKKSEAIERL----GAD---SFLVSRDQDEMQAA------MGTM  248 (361)
Q Consensus       183 ~g~~vlV~Ga-g~vG~~a~~la~~~g~~vi~~~~~~~~~~~~~~~~----g~~---~vv~~~~~~~~~~~------~~g~  248 (361)
                      .|+++||.|+ +++|.++++.+...|++|++++++.++...+.+++    +.+   ...|..+++.+..+      .+++
T Consensus         7 ~~k~~lItGas~gIG~aia~~l~~~G~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~Dv~~~~~i~~~~~~~~~~g~i   86 (263)
T PRK08339          7 SGKLAFTTASSKGIGFGVARVLARAGADVILLSRNEENLKKAREKIKSESNVDVSYIVADLTKREDLERTVKELKNIGEP   86 (263)
T ss_pred             CCCEEEEeCCCCcHHHHHHHHHHHCCCEEEEEeCCHHHHHHHHHHHHhhcCCceEEEEecCCCHHHHHHHHHHHHhhCCC
Confidence            5788999997 99999999999999999999999877766554443    322   12344554433322      1469


Q ss_pred             cEEEEcCCC
Q 018067          249 DGIIDTVSA  257 (361)
Q Consensus       249 d~vid~~g~  257 (361)
                      |++++++|.
T Consensus        87 D~lv~nag~   95 (263)
T PRK08339         87 DIFFFSTGG   95 (263)
T ss_pred             cEEEECCCC
Confidence            999999885

>PRK08618 ornithine cyclodeaminase; Validated

Probab=97.21  E-value=0.0026  Score=58.87  Aligned_cols=106  Identities=19%  Similarity=0.248  Sum_probs=73.5

Q ss_pred             hhcCCCCCCCEEEEEcCChHHHHHHHHH-HHcCC-eEEEEeCCchhHHHHHHHc----CCCEEecCCCHHHHHHhcCCcc
Q 018067          176 RFYGLDKPGMHVGVVGLGGLGHVAVKFA-KAMGV-KVTVISTSPSKKSEAIERL----GADSFLVSRDQDEMQAAMGTMD  249 (361)
Q Consensus       176 ~~~~~~~~g~~vlV~Gag~vG~~a~~la-~~~g~-~vi~~~~~~~~~~~~~~~~----g~~~vv~~~~~~~~~~~~~g~d  249 (361)
                      +..++ +..++++|+|+|..|.+.+..+ ...++ +|.+..++.++.+.+++++    +.. +....+   .++.....|
T Consensus       120 ~~la~-~~~~~v~iiGaG~~a~~~~~al~~~~~~~~v~v~~r~~~~a~~~~~~~~~~~~~~-~~~~~~---~~~~~~~aD  194 (325)
T PRK08618        120 KYLAR-EDAKTLCLIGTGGQAKGQLEAVLAVRDIERVRVYSRTFEKAYAFAQEIQSKFNTE-IYVVNS---ADEAIEEAD  194 (325)
T ss_pred             HHhcC-CCCcEEEEECCcHHHHHHHHHHHhcCCccEEEEECCCHHHHHHHHHHHHHhcCCc-EEEeCC---HHHHHhcCC
Confidence            33443 5677899999999998777654 45676 7888888888877776644    433 122333   233346799


Q ss_pred             EEEEcCCCcccHHHHHhccccCCEEEEecCCCC-CcccCh
Q 018067          250 GIIDTVSAVHPLMPLIGLLKSQGKLVLVGAPEK-PLELPA  288 (361)
Q Consensus       250 ~vid~~g~~~~~~~~~~~l~~~G~~v~~g~~~~-~~~~~~  288 (361)
                      +|+.|+++.+.+ .. +.+++|-.++.+|.... ..+++.
T Consensus       195 iVi~aT~s~~p~-i~-~~l~~G~hV~~iGs~~p~~~E~~~  232 (325)
T PRK08618        195 IIVTVTNAKTPV-FS-EKLKKGVHINAVGSFMPDMQELPS  232 (325)
T ss_pred             EEEEccCCCCcc-hH-HhcCCCcEEEecCCCCcccccCCH
Confidence            999999987743 34 89999999999998643 345555

>PRK05872 short chain dehydrogenase; Provisional

Probab=97.20  E-value=0.003  Score=57.62  Aligned_cols=75  Identities=24%  Similarity=0.345  Sum_probs=57.7

Q ss_pred             CCCEEEEEcC-ChHHHHHHHHHHHcCCeEEEEeCCchhHHHHHHHcCC--CEE---ecCCCHHHHHHh-------cCCcc
Q 018067          183 PGMHVGVVGL-GGLGHVAVKFAKAMGVKVTVISTSPSKKSEAIERLGA--DSF---LVSRDQDEMQAA-------MGTMD  249 (361)
Q Consensus       183 ~g~~vlV~Ga-g~vG~~a~~la~~~g~~vi~~~~~~~~~~~~~~~~g~--~~v---v~~~~~~~~~~~-------~~g~d  249 (361)
                      .|+++||.|+ |++|..+++.+...|++|++++++.++...+.++++.  ...   .|..+.+.+..+       .+++|
T Consensus         8 ~gk~vlItGas~gIG~~ia~~l~~~G~~V~~~~r~~~~l~~~~~~l~~~~~~~~~~~Dv~d~~~v~~~~~~~~~~~g~id   87 (296)
T PRK05872          8 AGKVVVVTGAARGIGAELARRLHARGAKLALVDLEEAELAALAAELGGDDRVLTVVADVTDLAAMQAAAEEAVERFGGID   87 (296)
T ss_pred             CCCEEEEECCCchHHHHHHHHHHHCCCEEEEEeCCHHHHHHHHHHhcCCCcEEEEEecCCCHHHHHHHHHHHHHHcCCCC
Confidence            5789999997 9999999999999999999999998887777777652  211   455555433322       24799


Q ss_pred             EEEEcCCC
Q 018067          250 GIIDTVSA  257 (361)
Q Consensus       250 ~vid~~g~  257 (361)
                      ++|+++|.
T Consensus        88 ~vI~nAG~   95 (296)
T PRK05872         88 VVVANAGI   95 (296)
T ss_pred             EEEECCCc
Confidence            99999985

>PRK12939 short chain dehydrogenase; Provisional

Probab=97.20  E-value=0.0064  Score=53.62  Aligned_cols=75  Identities=21%  Similarity=0.287  Sum_probs=54.0

Q ss_pred             CCCEEEEEcC-ChHHHHHHHHHHHcCCeEEEEeCCchhHHHHHHHc---CCC---EEecCCCHHHHHHhc-------CCc
Q 018067          183 PGMHVGVVGL-GGLGHVAVKFAKAMGVKVTVISTSPSKKSEAIERL---GAD---SFLVSRDQDEMQAAM-------GTM  248 (361)
Q Consensus       183 ~g~~vlV~Ga-g~vG~~a~~la~~~g~~vi~~~~~~~~~~~~~~~~---g~~---~vv~~~~~~~~~~~~-------~g~  248 (361)
                      ++.+++|.|+ |.+|...+..+...|++|+++++++++...+.+++   +..   ...|..+++.+.++.       +++
T Consensus         6 ~~~~vlItGa~g~iG~~la~~l~~~G~~v~~~~r~~~~~~~~~~~~~~~~~~~~~~~~Dl~~~~~~~~~~~~~~~~~~~i   85 (250)
T PRK12939          6 AGKRALVTGAARGLGAAFAEALAEAGATVAFNDGLAAEARELAAALEAAGGRAHAIAADLADPASVQRFFDAAAAALGGL   85 (250)
T ss_pred             CCCEEEEeCCCChHHHHHHHHHHHcCCEEEEEeCCHHHHHHHHHHHHhcCCcEEEEEccCCCHHHHHHHHHHHHHHcCCC
Confidence            4788999998 99999999999999999999988877655544433   322   123555554433322       479


Q ss_pred             cEEEEcCCC
Q 018067          249 DGIIDTVSA  257 (361)
Q Consensus       249 d~vid~~g~  257 (361)
                      |++|.++|.
T Consensus        86 d~vi~~ag~   94 (250)
T PRK12939         86 DGLVNNAGI   94 (250)
T ss_pred             CEEEECCCC
Confidence            999999985

>PRK08261 fabG 3-ketoacyl-(acyl-carrier-protein) reductase; Provisional

Probab=97.16  E-value=0.0053  Score=59.58  Aligned_cols=75  Identities=17%  Similarity=0.241  Sum_probs=54.0

Q ss_pred             CCCEEEEEcC-ChHHHHHHHHHHHcCCeEEEEeCCc--hhHHHHHHHcCCC-EEecCCCHHHHHHh-------cCCccEE
Q 018067          183 PGMHVGVVGL-GGLGHVAVKFAKAMGVKVTVISTSP--SKKSEAIERLGAD-SFLVSRDQDEMQAA-------MGTMDGI  251 (361)
Q Consensus       183 ~g~~vlV~Ga-g~vG~~a~~la~~~g~~vi~~~~~~--~~~~~~~~~~g~~-~vv~~~~~~~~~~~-------~~g~d~v  251 (361)
                      +++++||.|+ |++|..+++.+...|++|+++++..  ++..++.++++.. ...|..+.+.+..+       .+++|++
T Consensus       209 ~g~~vlItGasggIG~~la~~l~~~Ga~vi~~~~~~~~~~l~~~~~~~~~~~~~~Dv~~~~~~~~~~~~~~~~~g~id~v  288 (450)
T PRK08261        209 AGKVALVTGAARGIGAAIAEVLARDGAHVVCLDVPAAGEALAAVANRVGGTALALDITAPDAPARIAEHLAERHGGLDIV  288 (450)
T ss_pred             CCCEEEEecCCCHHHHHHHHHHHHCCCEEEEEeCCccHHHHHHHHHHcCCeEEEEeCCCHHHHHHHHHHHHHhCCCCCEE
Confidence            5789999997 9999999999999999999988743  3344555556643 23455565443332       2369999


Q ss_pred             EEcCCC
Q 018067          252 IDTVSA  257 (361)
Q Consensus       252 id~~g~  257 (361)
                      |+++|.
T Consensus       289 i~~AG~  294 (450)
T PRK08261        289 VHNAGI  294 (450)
T ss_pred             EECCCc
Confidence            999984

>TIGR00406 prmA ribosomal protein L11 methyltransferase

Probab=97.15  E-value=0.0047  Score=56.17  Aligned_cols=129  Identities=21%  Similarity=0.196  Sum_probs=74.6

Q ss_pred             CCceEECCCCCCcccccccchhhhhhhhHhhhcCCCCCCCEEEEEcCChHHHHHHHHHHHcCC-eEEEEeCCchhHHHHH
Q 018067          146 EHFVVRIPEGTPLDATAPLLCAGITVYSPLRFYGLDKPGMHVGVVGLGGLGHVAVKFAKAMGV-KVTVISTSPSKKSEAI  224 (361)
Q Consensus       146 ~~~~~~ip~~~~~~~aa~l~~~~~ta~~~l~~~~~~~~g~~vlV~Gag~vG~~a~~la~~~g~-~vi~~~~~~~~~~~~~  224 (361)
                      ....+.+.+++.|....- +...+ +...+...  .+++++||-+|+|. |..++.+++. |+ +|+.++.++.......
T Consensus       126 ~~~~i~ldpg~aFgtG~h-~tt~l-~l~~l~~~--~~~g~~VLDvGcGs-G~lai~aa~~-g~~~V~avDid~~al~~a~  199 (288)
T TIGR00406       126 DALIIMLDPGLAFGTGTH-PTTSL-CLEWLEDL--DLKDKNVIDVGCGS-GILSIAALKL-GAAKVVGIDIDPLAVESAR  199 (288)
T ss_pred             CcEEEEECCCCcccCCCC-HHHHH-HHHHHHhh--cCCCCEEEEeCCCh-hHHHHHHHHc-CCCeEEEEECCHHHHHHHH
Confidence            345667777776655321 11111 12233333  36789999999987 8777777764 55 8999998876554443


Q ss_pred             HH---cCCCEEecCCCHHHHHHhcCCccEEEEcCCCc---ccHHHHHhccccCCEEEEecCC
Q 018067          225 ER---LGADSFLVSRDQDEMQAAMGTMDGIIDTVSAV---HPLMPLIGLLKSQGKLVLVGAP  280 (361)
Q Consensus       225 ~~---~g~~~vv~~~~~~~~~~~~~g~d~vid~~g~~---~~~~~~~~~l~~~G~~v~~g~~  280 (361)
                      +.   .+....+.....+......+++|+|+......   ..+..+.+.|+++|.++..|..
T Consensus       200 ~n~~~n~~~~~~~~~~~~~~~~~~~~fDlVvan~~~~~l~~ll~~~~~~LkpgG~li~sgi~  261 (288)
T TIGR00406       200 KNAELNQVSDRLQVKLIYLEQPIEGKADVIVANILAEVIKELYPQFSRLVKPGGWLILSGIL  261 (288)
T ss_pred             HHHHHcCCCcceEEEecccccccCCCceEEEEecCHHHHHHHHHHHHHHcCCCcEEEEEeCc
Confidence            22   22211111001111112235799998765443   2355678899999999988753

Ribosomal protein L11 methyltransferase is an S-adenosyl-L-methionine-dependent methyltransferase required for the modification of ribosomal protein L11. This protein is found in bacteria and (with a probable transit peptide) in Arabidopsis.

>PRK00377 cbiT cobalt-precorrin-6Y C(15)-methyltransferase; Provisional

Probab=97.15  E-value=0.0071  Score=51.72  Aligned_cols=97  Identities=16%  Similarity=0.223  Sum_probs=66.7

Q ss_pred             CCCCCCEEEEEcCChHHHHHHHHHHHcC--CeEEEEeCCchhHHHH---HHHcC-CCE--EecCCCHHHHHHhcCCccEE
Q 018067          180 LDKPGMHVGVVGLGGLGHVAVKFAKAMG--VKVTVISTSPSKKSEA---IERLG-ADS--FLVSRDQDEMQAAMGTMDGI  251 (361)
Q Consensus       180 ~~~~g~~vlV~Gag~vG~~a~~la~~~g--~~vi~~~~~~~~~~~~---~~~~g-~~~--vv~~~~~~~~~~~~~g~d~v  251 (361)
                      .+.++++|+-+|+|. |.+++++++..+  .+|+.++.+++..+.+   ++.+| .+.  ++..+..+.+....+.+|.|
T Consensus        37 ~~~~~~~vlDlG~Gt-G~~s~~~a~~~~~~~~v~avD~~~~~~~~a~~n~~~~g~~~~v~~~~~d~~~~l~~~~~~~D~V  115 (198)
T PRK00377         37 RLRKGDMILDIGCGT-GSVTVEASLLVGETGKVYAVDKDEKAINLTRRNAEKFGVLNNIVLIKGEAPEILFTINEKFDRI  115 (198)
T ss_pred             CCCCcCEEEEeCCcC-CHHHHHHHHHhCCCCEEEEEECCHHHHHHHHHHHHHhCCCCCeEEEEechhhhHhhcCCCCCEE
Confidence            478999999999987 999999988764  5899999988765433   23456 222  22222233344444679999


Q ss_pred             EEcCCC---cccHHHHHhccccCCEEEEe
Q 018067          252 IDTVSA---VHPLMPLIGLLKSQGKLVLV  277 (361)
Q Consensus       252 id~~g~---~~~~~~~~~~l~~~G~~v~~  277 (361)
                      |...+.   ...+..+.+.|+++|+++..
T Consensus       116 ~~~~~~~~~~~~l~~~~~~LkpgG~lv~~  144 (198)
T PRK00377        116 FIGGGSEKLKEIISASWEIIKKGGRIVID  144 (198)
T ss_pred             EECCCcccHHHHHHHHHHHcCCCcEEEEE
Confidence            986553   23466778899999999853

>PRK07060 short chain dehydrogenase; Provisional

Probab=97.14  E-value=0.0033  Score=55.30  Aligned_cols=75  Identities=21%  Similarity=0.374  Sum_probs=57.8

Q ss_pred             CCCEEEEEcC-ChHHHHHHHHHHHcCCeEEEEeCCchhHHHHHHHcCCCE-EecCCCHHHHHHhc---CCccEEEEcCCC
Q 018067          183 PGMHVGVVGL-GGLGHVAVKFAKAMGVKVTVISTSPSKKSEAIERLGADS-FLVSRDQDEMQAAM---GTMDGIIDTVSA  257 (361)
Q Consensus       183 ~g~~vlV~Ga-g~vG~~a~~la~~~g~~vi~~~~~~~~~~~~~~~~g~~~-vv~~~~~~~~~~~~---~g~d~vid~~g~  257 (361)
                      ++.+++|.|+ |.+|..+++.+...|++|++++++.++..++.+..+... ..|..+.+.+.++.   +++|++|+++|.
T Consensus         8 ~~~~~lItGa~g~iG~~~a~~l~~~g~~V~~~~r~~~~~~~~~~~~~~~~~~~D~~~~~~v~~~~~~~~~~d~vi~~ag~   87 (245)
T PRK07060          8 SGKSVLVTGASSGIGRACAVALAQRGARVVAAARNAAALDRLAGETGCEPLRLDVGDDAAIRAALAAAGAFDGLVNCAGI   87 (245)
T ss_pred             CCCEEEEeCCcchHHHHHHHHHHHCCCEEEEEeCCHHHHHHHHHHhCCeEEEecCCCHHHHHHHHHHhCCCCEEEECCCC
Confidence            5678999998 999999999999999999999998877777766666543 23555655444432   469999999985

>PRK05993 short chain dehydrogenase; Provisional

Probab=97.14  E-value=0.0053  Score=55.40  Aligned_cols=74  Identities=14%  Similarity=0.207  Sum_probs=54.0

Q ss_pred             CCCEEEEEcC-ChHHHHHHHHHHHcCCeEEEEeCCchhHHHHHHHcCCCE-EecCCCHHHHHH----h---c-CCccEEE
Q 018067          183 PGMHVGVVGL-GGLGHVAVKFAKAMGVKVTVISTSPSKKSEAIERLGADS-FLVSRDQDEMQA----A---M-GTMDGII  252 (361)
Q Consensus       183 ~g~~vlV~Ga-g~vG~~a~~la~~~g~~vi~~~~~~~~~~~~~~~~g~~~-vv~~~~~~~~~~----~---~-~g~d~vi  252 (361)
                      .+++++|.|+ |++|...++.+...|++|++++++.++...+. ..+... ..|..+.+.+..    +   . +.+|++|
T Consensus         3 ~~k~vlItGasggiG~~la~~l~~~G~~Vi~~~r~~~~~~~l~-~~~~~~~~~Dl~d~~~~~~~~~~~~~~~~g~id~li   81 (277)
T PRK05993          3 MKRSILITGCSSGIGAYCARALQSDGWRVFATCRKEEDVAALE-AEGLEAFQLDYAEPESIAALVAQVLELSGGRLDALF   81 (277)
T ss_pred             CCCEEEEeCCCcHHHHHHHHHHHHCCCEEEEEECCHHHHHHHH-HCCceEEEccCCCHHHHHHHHHHHHHHcCCCccEEE
Confidence            4678999998 99999999999999999999999887766663 345432 235555543322    2   1 3689999


Q ss_pred             EcCCC
Q 018067          253 DTVSA  257 (361)
Q Consensus       253 d~~g~  257 (361)
                      +++|.
T Consensus        82 ~~Ag~   86 (277)
T PRK05993         82 NNGAY   86 (277)
T ss_pred             ECCCc
Confidence            99874

>PF12847 Methyltransf_18: Methyltransferase domain; PDB: 3G2Q_A 3G2O_A 3G2M_B 3G2P_B 3D2L_B 1IM8_B 3NJR_A 3E05_H 3EVZ_A 3HM2_A

Probab=97.13  E-value=0.0033  Score=48.07  Aligned_cols=94  Identities=28%  Similarity=0.327  Sum_probs=63.2

Q ss_pred             CCCEEEEEcCChHHHHHHHHHH-HcCCeEEEEeCCchhHHHHHHHc---CC--CEEecCCCHHHHHHhcCCccEEEEcC-
Q 018067          183 PGMHVGVVGLGGLGHVAVKFAK-AMGVKVTVISTSPSKKSEAIERL---GA--DSFLVSRDQDEMQAAMGTMDGIIDTV-  255 (361)
Q Consensus       183 ~g~~vlV~Gag~vG~~a~~la~-~~g~~vi~~~~~~~~~~~~~~~~---g~--~~vv~~~~~~~~~~~~~g~d~vid~~-  255 (361)
                      ||.+||-+|+|. |..++.+++ ..+++|+.++.+++..+.+.+..   +.  ...+...+........+++|+|+... 
T Consensus         1 p~~~vLDlGcG~-G~~~~~l~~~~~~~~v~gvD~s~~~~~~a~~~~~~~~~~~~i~~~~~d~~~~~~~~~~~D~v~~~~~   79 (112)
T PF12847_consen    1 PGGRVLDLGCGT-GRLSIALARLFPGARVVGVDISPEMLEIARERAAEEGLSDRITFVQGDAEFDPDFLEPFDLVICSGF   79 (112)
T ss_dssp             TTCEEEEETTTT-SHHHHHHHHHHTTSEEEEEESSHHHHHHHHHHHHHTTTTTTEEEEESCCHGGTTTSSCEEEEEECSG
T ss_pred             CCCEEEEEcCcC-CHHHHHHHhcCCCCEEEEEeCCHHHHHHHHHHHHhcCCCCCeEEEECccccCcccCCCCCEEEECCC
Confidence            678999999875 788888888 47889999999988766665554   22  22222222222223334799999877 


Q ss_pred             CCc---c------cHHHHHhccccCCEEEEe
Q 018067          256 SAV---H------PLMPLIGLLKSQGKLVLV  277 (361)
Q Consensus       256 g~~---~------~~~~~~~~l~~~G~~v~~  277 (361)
                      ...   .      .++.+.+.|+|+|+++.-
T Consensus        80 ~~~~~~~~~~~~~~l~~~~~~L~pgG~lvi~  110 (112)
T PF12847_consen   80 TLHFLLPLDERRRVLERIRRLLKPGGRLVIN  110 (112)
T ss_dssp             SGGGCCHHHHHHHHHHHHHHHEEEEEEEEEE
T ss_pred             ccccccchhHHHHHHHHHHHhcCCCcEEEEE
Confidence            222   1      256788899999998863

...

>PRK00258 aroE shikimate 5-dehydrogenase; Reviewed

Probab=97.09  E-value=0.0044  Score=56.03  Aligned_cols=96  Identities=19%  Similarity=0.195  Sum_probs=65.8

Q ss_pred             CCCCEEEEEcCChHHHHHHHHHHHcC-CeEEEEeCCchhHHHHHHHcCCCEEecCCCHHHHHHhcCCccEEEEcCCCccc
Q 018067          182 KPGMHVGVVGLGGLGHVAVKFAKAMG-VKVTVISTSPSKKSEAIERLGADSFLVSRDQDEMQAAMGTMDGIIDTVSAVHP  260 (361)
Q Consensus       182 ~~g~~vlV~Gag~vG~~a~~la~~~g-~~vi~~~~~~~~~~~~~~~~g~~~vv~~~~~~~~~~~~~g~d~vid~~g~~~~  260 (361)
                      ..+++++|+|+|++|.+++..+...| .+|+++.++.++.+.++++++....+....  ........+|+||+++.....
T Consensus       121 ~~~k~vlVlGaGg~a~ai~~aL~~~g~~~V~v~~R~~~~a~~l~~~~~~~~~~~~~~--~~~~~~~~~DivInaTp~g~~  198 (278)
T PRK00258        121 LKGKRILILGAGGAARAVILPLLDLGVAEITIVNRTVERAEELAKLFGALGKAELDL--ELQEELADFDLIINATSAGMS  198 (278)
T ss_pred             CCCCEEEEEcCcHHHHHHHHHHHHcCCCEEEEEeCCHHHHHHHHHHhhhccceeecc--cchhccccCCEEEECCcCCCC
Confidence            46788999999999999999999999 599999999888878877665321011100  111233579999999875431


Q ss_pred             H-----HHHHhccccCCEEEEecC
Q 018067          261 L-----MPLIGLLKSQGKLVLVGA  279 (361)
Q Consensus       261 ~-----~~~~~~l~~~G~~v~~g~  279 (361)
                      -     ......++++..++++-.
T Consensus       199 ~~~~~~~~~~~~l~~~~~v~DivY  222 (278)
T PRK00258        199 GELPLPPLPLSLLRPGTIVYDMIY  222 (278)
T ss_pred             CCCCCCCCCHHHcCCCCEEEEeec
Confidence            0     122356677777777754

>PRK13940 glutamyl-tRNA reductase; Provisional

Probab=97.07  E-value=0.008  Score=57.32  Aligned_cols=95  Identities=14%  Similarity=0.217  Sum_probs=66.7

Q ss_pred             CCCCEEEEEcCChHHHHHHHHHHHcCC-eEEEEeCCchhHHHHHHHcCCCEEecCCCHHHHHHhcCCccEEEEcCCCccc
Q 018067          182 KPGMHVGVVGLGGLGHVAVKFAKAMGV-KVTVISTSPSKKSEAIERLGADSFLVSRDQDEMQAAMGTMDGIIDTVSAVHP  260 (361)
Q Consensus       182 ~~g~~vlV~Gag~vG~~a~~la~~~g~-~vi~~~~~~~~~~~~~~~~g~~~vv~~~~~~~~~~~~~g~d~vid~~g~~~~  260 (361)
                      -.+.+|+|+|+|.+|.+++..+...|+ +++++.++.++...++++++...++..   +........+|+||+|++.++.
T Consensus       179 l~~kkvlviGaG~~a~~va~~L~~~g~~~I~V~nRt~~ra~~La~~~~~~~~~~~---~~l~~~l~~aDiVI~aT~a~~~  255 (414)
T PRK13940        179 ISSKNVLIIGAGQTGELLFRHVTALAPKQIMLANRTIEKAQKITSAFRNASAHYL---SELPQLIKKADIIIAAVNVLEY  255 (414)
T ss_pred             ccCCEEEEEcCcHHHHHHHHHHHHcCCCEEEEECCCHHHHHHHHHHhcCCeEecH---HHHHHHhccCCEEEECcCCCCe
Confidence            467899999999999999999999997 788898988888888888762222222   2334445579999999999874


Q ss_pred             HHHHHhccccCC-EEEEecCC
Q 018067          261 LMPLIGLLKSQG-KLVLVGAP  280 (361)
Q Consensus       261 ~~~~~~~l~~~G-~~v~~g~~  280 (361)
                      +-. .+.++... -+++++.|
T Consensus       256 vi~-~~~~~~~~~~~iDLavP  275 (414)
T PRK13940        256 IVT-CKYVGDKPRVFIDISIP  275 (414)
T ss_pred             eEC-HHHhCCCCeEEEEeCCC
Confidence            322 12222111 35677665

>PRK14192 bifunctional 5,10-methylene-tetrahydrofolate dehydrogenase/ 5,10-methylene-tetrahydrofolate cyclohydrolase; Provisional

Probab=97.06  E-value=0.007  Score=54.61  Aligned_cols=94  Identities=18%  Similarity=0.212  Sum_probs=66.8

Q ss_pred             chhhhhhhhHhhhcCCCCCCCEEEEEcCCh-HHHHHHHHHHHcCCeEEEEeCCchhHHHHHHHcCCCEEecCCCHHHHHH
Q 018067          165 LCAGITVYSPLRFYGLDKPGMHVGVVGLGG-LGHVAVKFAKAMGVKVTVISTSPSKKSEAIERLGADSFLVSRDQDEMQA  243 (361)
Q Consensus       165 ~~~~~ta~~~l~~~~~~~~g~~vlV~Gag~-vG~~a~~la~~~g~~vi~~~~~~~~~~~~~~~~g~~~vv~~~~~~~~~~  243 (361)
                      +|+.......++....--.|++|+|+|.|. +|...+.++...|++|+++.+..+   .+                  .+
T Consensus       140 p~T~~gii~~L~~~~i~l~Gk~vvViG~gg~vGkpia~~L~~~gatVtv~~~~t~---~L------------------~~  198 (283)
T PRK14192        140 SATPAGIMRLLKAYNIELAGKHAVVVGRSAILGKPMAMMLLNANATVTICHSRTQ---NL------------------PE  198 (283)
T ss_pred             CCcHHHHHHHHHHcCCCCCCCEEEEECCcHHHHHHHHHHHHhCCCEEEEEeCCch---hH------------------HH
Confidence            344333444555555446899999999976 999999999999998887766322   12                  12


Q ss_pred             hcCCccEEEEcCCCcccHHHHHhccccCCEEEEecCCC
Q 018067          244 AMGTMDGIIDTVSAVHPLMPLIGLLKSQGKLVLVGAPE  281 (361)
Q Consensus       244 ~~~g~d~vid~~g~~~~~~~~~~~l~~~G~~v~~g~~~  281 (361)
                      ....+|++|+++|.+..+.  .+.++++..++++|...
T Consensus       199 ~~~~aDIvI~AtG~~~~v~--~~~lk~gavViDvg~n~  234 (283)
T PRK14192        199 LVKQADIIVGAVGKPELIK--KDWIKQGAVVVDAGFHP  234 (283)
T ss_pred             HhccCCEEEEccCCCCcCC--HHHcCCCCEEEEEEEee
Confidence            2246899999999876333  46689999999998653

>PRK06484 short chain dehydrogenase; Validated

Probab=97.05  E-value=0.0088  Score=59.13  Aligned_cols=99  Identities=18%  Similarity=0.276  Sum_probs=71.2

Q ss_pred             CCCCEEEEEcC-ChHHHHHHHHHHHcCCeEEEEeCCchhHHHHHHHcCCCE---EecCCCHHHHHHh-------cCCccE
Q 018067          182 KPGMHVGVVGL-GGLGHVAVKFAKAMGVKVTVISTSPSKKSEAIERLGADS---FLVSRDQDEMQAA-------MGTMDG  250 (361)
Q Consensus       182 ~~g~~vlV~Ga-g~vG~~a~~la~~~g~~vi~~~~~~~~~~~~~~~~g~~~---vv~~~~~~~~~~~-------~~g~d~  250 (361)
                      ..|+++||.|+ +++|..+++.+...|++|++++++.++...+.++++...   ..|..+++.+..+       .+.+|+
T Consensus       267 ~~~k~~lItGas~gIG~~~a~~l~~~G~~V~~~~r~~~~~~~~~~~~~~~~~~~~~D~~~~~~~~~~~~~~~~~~g~id~  346 (520)
T PRK06484        267 ESPRVVAITGGARGIGRAVADRFAAAGDRLLIIDRDAEGAKKLAEALGDEHLSVQADITDEAAVESAFAQIQARWGRLDV  346 (520)
T ss_pred             cCCCEEEEECCCcHHHHHHHHHHHHCCCEEEEEeCCHHHHHHHHHHhCCceeEEEccCCCHHHHHHHHHHHHHHcCCCCE
Confidence            46788999997 999999999999999999999998887777766666432   2355555433322       246999


Q ss_pred             EEEcCCCcc--------------------------cHHHHHhccccCCEEEEecCC
Q 018067          251 IIDTVSAVH--------------------------PLMPLIGLLKSQGKLVLVGAP  280 (361)
Q Consensus       251 vid~~g~~~--------------------------~~~~~~~~l~~~G~~v~~g~~  280 (361)
                      +|+++|...                          ..+.++..++.+|+++.+++.
T Consensus       347 li~nAg~~~~~~~~~~~~~~~~~~~~~~n~~~~~~~~~~~~~~~~~~g~iv~isS~  402 (520)
T PRK06484        347 LVNNAGIAEVFKPSLEQSAEDFTRVYDVNLSGAFACARAAARLMSQGGVIVNLGSI  402 (520)
T ss_pred             EEECCCCcCCCCChhhCCHHHHHHHHHhCcHHHHHHHHHHHHHhccCCEEEEECch
Confidence            999988521                          122334455667999999864

>PRK12548 shikimate 5-dehydrogenase; Provisional

Probab=97.05  E-value=0.0051  Score=55.90  Aligned_cols=98  Identities=12%  Similarity=0.177  Sum_probs=62.3

Q ss_pred             CCCCEEEEEcCChHHHHHHHHHHHcCCe-EEEEeCCc---hhHHHHHHHcCC---C---EEecCCCHHHHHHhcCCccEE
Q 018067          182 KPGMHVGVVGLGGLGHVAVKFAKAMGVK-VTVISTSP---SKKSEAIERLGA---D---SFLVSRDQDEMQAAMGTMDGI  251 (361)
Q Consensus       182 ~~g~~vlV~Gag~vG~~a~~la~~~g~~-vi~~~~~~---~~~~~~~~~~g~---~---~vv~~~~~~~~~~~~~g~d~v  251 (361)
                      -.+++++|+|+|++|.+++..+...|++ |+++.++.   ++.+.+++++..   .   ...+..+.+.+......+|++
T Consensus       124 ~~~k~vlI~GAGGagrAia~~La~~G~~~V~I~~R~~~~~~~a~~l~~~l~~~~~~~~~~~~d~~~~~~~~~~~~~~Dil  203 (289)
T PRK12548        124 VKGKKLTVIGAGGAATAIQVQCALDGAKEITIFNIKDDFYERAEQTAEKIKQEVPECIVNVYDLNDTEKLKAEIASSDIL  203 (289)
T ss_pred             cCCCEEEEECCcHHHHHHHHHHHHCCCCEEEEEeCCchHHHHHHHHHHHHhhcCCCceeEEechhhhhHHHhhhccCCEE
Confidence            3578899999999999999988889995 99998886   555555554421   1   123333333444444578999


Q ss_pred             EEcCCCccc-----HHH-HHhccccCCEEEEecC
Q 018067          252 IDTVSAVHP-----LMP-LIGLLKSQGKLVLVGA  279 (361)
Q Consensus       252 id~~g~~~~-----~~~-~~~~l~~~G~~v~~g~  279 (361)
                      |+++.-...     ... ....+.++..+.++-.
T Consensus       204 INaTp~Gm~~~~~~~~~~~~~~l~~~~~v~D~vY  237 (289)
T PRK12548        204 VNATLVGMKPNDGETNIKDTSVFRKDLVVADTVY  237 (289)
T ss_pred             EEeCCCCCCCCCCCCCCCcHHhcCCCCEEEEecC
Confidence            998753210     000 1245666666666644

>TIGR01809 Shik-DH-AROM shikimate-5-dehydrogenase, fungal AROM-type

Probab=97.05  E-value=0.0025  Score=57.67  Aligned_cols=77  Identities=25%  Similarity=0.255  Sum_probs=56.1

Q ss_pred             CCCEEEEEcCChHHHHHHHHHHHcCC-eEEEEeCCchhHHHHHHHcCCCE-EecCCCHHHHHHhcCCccEEEEcCCCcc
Q 018067          183 PGMHVGVVGLGGLGHVAVKFAKAMGV-KVTVISTSPSKKSEAIERLGADS-FLVSRDQDEMQAAMGTMDGIIDTVSAVH  259 (361)
Q Consensus       183 ~g~~vlV~Gag~vG~~a~~la~~~g~-~vi~~~~~~~~~~~~~~~~g~~~-vv~~~~~~~~~~~~~g~d~vid~~g~~~  259 (361)
                      ++++++|+|+|+.+.+++..+...|+ +++++.|+.++.+.++++++... +......+.+......+|+||+|++...
T Consensus       124 ~~k~vlvlGaGGaarai~~aL~~~G~~~i~I~nRt~~ka~~La~~~~~~~~~~~~~~~~~~~~~~~~~DiVInaTp~g~  202 (282)
T TIGR01809       124 AGFRGLVIGAGGTSRAAVYALASLGVTDITVINRNPDKLSRLVDLGVQVGVITRLEGDSGGLAIEKAAEVLVSTVPADV  202 (282)
T ss_pred             CCceEEEEcCcHHHHHHHHHHHHcCCCeEEEEeCCHHHHHHHHHHhhhcCcceeccchhhhhhcccCCCEEEECCCCCC
Confidence            57899999999999999999999998 79999999988888887775321 1111111122233357999999987643

This model represents a clade of shikimate-5-dehydrogenases found in Corynebacterium, Mycobacteria and fungi. The fungal sequences are pentafunctional proteins known as AroM which contain the central five seven steps in the chorismate biosynthesis pathway. The Corynebacterium and Mycobacterial sequences represent the sole shikimate-5-dehydrogenases in species which otherwise have every enzyme of the chorismate biosynthesis pathway.

>PRK07326 short chain dehydrogenase; Provisional

Probab=97.03  E-value=0.0069  Score=53.03  Aligned_cols=75  Identities=23%  Similarity=0.265  Sum_probs=53.3

Q ss_pred             CCCEEEEEcC-ChHHHHHHHHHHHcCCeEEEEeCCchhHHHHHHHcCC---CEE--ecCCCHHHHHH----h---cCCcc
Q 018067          183 PGMHVGVVGL-GGLGHVAVKFAKAMGVKVTVISTSPSKKSEAIERLGA---DSF--LVSRDQDEMQA----A---MGTMD  249 (361)
Q Consensus       183 ~g~~vlV~Ga-g~vG~~a~~la~~~g~~vi~~~~~~~~~~~~~~~~g~---~~v--v~~~~~~~~~~----~---~~g~d  249 (361)
                      .+.+++|+|+ |.+|..+++.+...|++|+++++++++...+.+.+..   -..  .|..+.+.+..    +   .+++|
T Consensus         5 ~~~~ilItGatg~iG~~la~~l~~~g~~V~~~~r~~~~~~~~~~~l~~~~~~~~~~~D~~~~~~~~~~~~~~~~~~~~~d   84 (237)
T PRK07326          5 KGKVALITGGSKGIGFAIAEALLAEGYKVAITARDQKELEEAAAELNNKGNVLGLAADVRDEADVQRAVDAIVAAFGGLD   84 (237)
T ss_pred             CCCEEEEECCCCcHHHHHHHHHHHCCCEEEEeeCCHHHHHHHHHHHhccCcEEEEEccCCCHHHHHHHHHHHHHHcCCCC
Confidence            4688999997 9999999999988899999999988776666555531   111  24444443322    1   24799


Q ss_pred             EEEEcCCC
Q 018067          250 GIIDTVSA  257 (361)
Q Consensus       250 ~vid~~g~  257 (361)
                      ++|++.|.
T Consensus        85 ~vi~~ag~   92 (237)
T PRK07326         85 VLIANAGV   92 (237)
T ss_pred             EEEECCCC
Confidence            99999874

>TIGR01470 cysG_Nterm siroheme synthase, N-terminal domain

Probab=97.03  E-value=0.015  Score=50.01  Aligned_cols=95  Identities=19%  Similarity=0.143  Sum_probs=63.6

Q ss_pred             CCCEEEEEcCChHHHHHHHHHHHcCCeEEEEeCCch-hHHHHHHHcCCCEEecCCCHHHHHHhcCCccEEEEcCCCcccH
Q 018067          183 PGMHVGVVGLGGLGHVAVKFAKAMGVKVTVISTSPS-KKSEAIERLGADSFLVSRDQDEMQAAMGTMDGIIDTVSAVHPL  261 (361)
Q Consensus       183 ~g~~vlV~Gag~vG~~a~~la~~~g~~vi~~~~~~~-~~~~~~~~~g~~~vv~~~~~~~~~~~~~g~d~vid~~g~~~~~  261 (361)
                      .|.+|||+|+|.+|..-+..+...|++|++++.... ....+.+ .|--..+ .++.+  .....++++||-+.+....-
T Consensus         8 ~gk~vlVvGgG~va~rk~~~Ll~~ga~VtVvsp~~~~~l~~l~~-~~~i~~~-~~~~~--~~dl~~~~lVi~at~d~~ln   83 (205)
T TIGR01470         8 EGRAVLVVGGGDVALRKARLLLKAGAQLRVIAEELESELTLLAE-QGGITWL-ARCFD--ADILEGAFLVIAATDDEELN   83 (205)
T ss_pred             CCCeEEEECcCHHHHHHHHHHHHCCCEEEEEcCCCCHHHHHHHH-cCCEEEE-eCCCC--HHHhCCcEEEEECCCCHHHH
Confidence            467999999999999999999999999998876543 3344432 2311111 11111  12235899999999987634


Q ss_pred             HHHHhccccCCEEEEecCCC
Q 018067          262 MPLIGLLKSQGKLVLVGAPE  281 (361)
Q Consensus       262 ~~~~~~l~~~G~~v~~g~~~  281 (361)
                      .......+..|..+.+....
T Consensus        84 ~~i~~~a~~~~ilvn~~d~~  103 (205)
T TIGR01470        84 RRVAHAARARGVPVNVVDDP  103 (205)
T ss_pred             HHHHHHHHHcCCEEEECCCc
Confidence            45666666778888765543

This model represents a subfamily of CysG N-terminal region-related sequences. All sequences in the seed alignment for this model are N-terminal regions of known or predicted siroheme synthases. The C-terminal region of each is uroporphyrin-III C-methyltransferase (EC 2.1.1.107), which catalyzes the first step committed to the biosynthesis of either siroheme or cobalamin (vitamin B12) rather than protoheme (heme). The region represented by this model completes the process of oxidation and iron insertion to yield siroheme. Siroheme is a cofactor for nitrite and sulfite reductases, so siroheme synthase is CysG of cysteine biosynthesis in some organisms.

>PRK07806 short chain dehydrogenase; Provisional

Probab=97.02  E-value=0.007  Score=53.42  Aligned_cols=97  Identities=20%  Similarity=0.299  Sum_probs=63.0

Q ss_pred             CCCEEEEEcC-ChHHHHHHHHHHHcCCeEEEEeCCch-hHHHHHHH---cCCC---EEecCCCHHHHHHh-------cCC
Q 018067          183 PGMHVGVVGL-GGLGHVAVKFAKAMGVKVTVISTSPS-KKSEAIER---LGAD---SFLVSRDQDEMQAA-------MGT  247 (361)
Q Consensus       183 ~g~~vlV~Ga-g~vG~~a~~la~~~g~~vi~~~~~~~-~~~~~~~~---~g~~---~vv~~~~~~~~~~~-------~~g  247 (361)
                      +++++||.|+ |.+|...+..+...|++|+++.++.+ +...+.++   .+.+   ...|..+++.+..+       .++
T Consensus         5 ~~k~vlItGasggiG~~l~~~l~~~G~~V~~~~r~~~~~~~~~~~~l~~~~~~~~~~~~D~~~~~~~~~~~~~~~~~~~~   84 (248)
T PRK07806          5 PGKTALVTGSSRGIGADTAKILAGAGAHVVVNYRQKAPRANKVVAEIEAAGGRASAVGADLTDEESVAALMDTAREEFGG   84 (248)
T ss_pred             CCcEEEEECCCCcHHHHHHHHHHHCCCEEEEEeCCchHhHHHHHHHHHhcCCceEEEEcCCCCHHHHHHHHHHHHHhCCC
Confidence            4678999997 99999999999999999998888653 23333222   2322   12355555443322       146


Q ss_pred             ccEEEEcCCCc-------------------ccHHHHHhccccCCEEEEecC
Q 018067          248 MDGIIDTVSAV-------------------HPLMPLIGLLKSQGKLVLVGA  279 (361)
Q Consensus       248 ~d~vid~~g~~-------------------~~~~~~~~~l~~~G~~v~~g~  279 (361)
                      +|++|.++|..                   ..++.+...++.+|+++.++.
T Consensus        85 ~d~vi~~ag~~~~~~~~~~~~~~vn~~~~~~l~~~~~~~~~~~~~iv~isS  135 (248)
T PRK07806         85 LDALVLNASGGMESGMDEDYAMRLNRDAQRNLARAALPLMPAGSRVVFVTS  135 (248)
T ss_pred             CcEEEECCCCCCCCCCCcceeeEeeeHHHHHHHHHHHhhccCCceEEEEeC
Confidence            89999988642                   123345555556789998865

>cd01075 NAD_bind_Leu_Phe_Val_DH NAD(P) binding domain of leucine dehydrogenase, phenylalanine dehydrogenase, and valine dehydrogenase

Probab=97.01  E-value=0.021  Score=48.84  Aligned_cols=70  Identities=21%  Similarity=0.220  Sum_probs=51.1

Q ss_pred             CCCCEEEEEcCChHHHHHHHHHHHcCCeEEEEeCCchhHHHHHHHcCCCEEecCCCHHHHHHhcCCccEEEEcCCC
Q 018067          182 KPGMHVGVVGLGGLGHVAVKFAKAMGVKVTVISTSPSKKSEAIERLGADSFLVSRDQDEMQAAMGTMDGIIDTVSA  257 (361)
Q Consensus       182 ~~g~~vlV~Gag~vG~~a~~la~~~g~~vi~~~~~~~~~~~~~~~~g~~~vv~~~~~~~~~~~~~g~d~vid~~g~  257 (361)
                      -.|.+++|+|.|.+|..+++.+...|++|++++++.++...+.+.+|+.. ++..+     .....+|+++-|+..
T Consensus        26 l~gk~v~I~G~G~vG~~~A~~L~~~G~~Vvv~D~~~~~~~~~~~~~g~~~-v~~~~-----l~~~~~Dv~vp~A~~   95 (200)
T cd01075          26 LEGKTVAVQGLGKVGYKLAEHLLEEGAKLIVADINEEAVARAAELFGATV-VAPEE-----IYSVDADVFAPCALG   95 (200)
T ss_pred             CCCCEEEEECCCHHHHHHHHHHHHCCCEEEEEcCCHHHHHHHHHHcCCEE-Ecchh-----hccccCCEEEecccc
Confidence            46789999999999999999999999999999888887777766667543 22211     111257777755443

Amino acid dehydrogenase (DH) is a widely distributed family of enzymes that catalyzes the oxidative deamination of an amino acid to its keto acid and ammonia with concomitant reduction of NADP+. For example, leucine DH catalyzes the reversible oxidative deamination of L-leucine and several other straight or branched chain amino acids to the corresponding 2-oxoacid derivative. Amino acid DH -like NAD(P)-binding domains are members of the Rossmann fold superfamily and include glutamate, leucine, and phenylalanine DHs, methylene tetrahydrofolate DH, methylene-tetrahydromethanopterin DH, methylene-tetrahydropholate DH/cyclohydrolase, Shikimate DH-like proteins, malate oxidoreductases, and glutamyl tRNA reductase. Amino acid DHs catalyze the deamination of amino acids to keto acids with NAD(P)+ as a cofactor. The NAD(P)-binding Rossmann fold superfamily inc

>PRK06057 short chain dehydrogenase; Provisional

Probab=97.01  E-value=0.0054  Score=54.50  Aligned_cols=75  Identities=21%  Similarity=0.273  Sum_probs=55.8

Q ss_pred             CCCEEEEEcC-ChHHHHHHHHHHHcCCeEEEEeCCchhHHHHHHHcCCC-EEecCCCHHHHHHh-------cCCccEEEE
Q 018067          183 PGMHVGVVGL-GGLGHVAVKFAKAMGVKVTVISTSPSKKSEAIERLGAD-SFLVSRDQDEMQAA-------MGTMDGIID  253 (361)
Q Consensus       183 ~g~~vlV~Ga-g~vG~~a~~la~~~g~~vi~~~~~~~~~~~~~~~~g~~-~vv~~~~~~~~~~~-------~~g~d~vid  253 (361)
                      .|++|+|+|+ |.+|..+++.+...|++|++++++..+.....++++.. ...|..+++.+.++       .+++|++|.
T Consensus         6 ~~~~vlItGasggIG~~~a~~l~~~G~~v~~~~r~~~~~~~~~~~~~~~~~~~D~~~~~~~~~~~~~~~~~~~~id~vi~   85 (255)
T PRK06057          6 AGRVAVITGGGSGIGLATARRLAAEGATVVVGDIDPEAGKAAADEVGGLFVPTDVTDEDAVNALFDTAAETYGSVDIAFN   85 (255)
T ss_pred             CCCEEEEECCCchHHHHHHHHHHHcCCEEEEEeCCHHHHHHHHHHcCCcEEEeeCCCHHHHHHHHHHHHHHcCCCCEEEE
Confidence            4789999998 99999999999999999999999877666665556543 22355555443332       246899999


Q ss_pred             cCCC
Q 018067          254 TVSA  257 (361)
Q Consensus       254 ~~g~  257 (361)
                      ++|.
T Consensus        86 ~ag~   89 (255)
T PRK06057         86 NAGI   89 (255)
T ss_pred             CCCc
Confidence            9874

>PF03435 Saccharop_dh: Saccharopine dehydrogenase ; InterPro: IPR005097 This entry represents saccharopine dehydrogenase and homospermidine synthase

Probab=97.00  E-value=0.0041  Score=59.04  Aligned_cols=92  Identities=18%  Similarity=0.250  Sum_probs=66.4

Q ss_pred             EEEEcCChHHHHHHHHHHHcC-C-eEEEEeCCchhHHHHHHHc-CC---CEEecCCCHHHHHHhcCCccEEEEcCCCccc
Q 018067          187 VGVVGLGGLGHVAVKFAKAMG-V-KVTVISTSPSKKSEAIERL-GA---DSFLVSRDQDEMQAAMGTMDGIIDTVSAVHP  260 (361)
Q Consensus       187 vlV~Gag~vG~~a~~la~~~g-~-~vi~~~~~~~~~~~~~~~~-g~---~~vv~~~~~~~~~~~~~g~d~vid~~g~~~~  260 (361)
                      |+|+|+|.+|..+++.+...+ . ++++.+++.++.+.+.+++ +.   ...+|..+.+.+.++..+.|+||+|+|....
T Consensus         1 IlvlG~G~vG~~~~~~L~~~~~~~~v~va~r~~~~~~~~~~~~~~~~~~~~~~d~~~~~~l~~~~~~~dvVin~~gp~~~   80 (386)
T PF03435_consen    1 ILVLGAGRVGSAIARLLARRGPFEEVTVADRNPEKAERLAEKLLGDRVEAVQVDVNDPESLAELLRGCDVVINCAGPFFG   80 (386)
T ss_dssp             EEEE--SHHHHHHHHHHHCTTCE-EEEEEESSHHHHHHHHT--TTTTEEEEE--TTTHHHHHHHHTTSSEEEE-SSGGGH
T ss_pred             CEEEcCcHHHHHHHHHHhcCCCCCcEEEEECCHHHHHHHHhhccccceeEEEEecCCHHHHHHHHhcCCEEEECCccchh
Confidence            688999999999999998775 4 8999999998877776542 22   2345667777788888889999999997654


Q ss_pred             HHHHHhccccCCEEEEec
Q 018067          261 LMPLIGLLKSQGKLVLVG  278 (361)
Q Consensus       261 ~~~~~~~l~~~G~~v~~g  278 (361)
                      ...+..+++.+-.+++.+
T Consensus        81 ~~v~~~~i~~g~~yvD~~   98 (386)
T PF03435_consen   81 EPVARACIEAGVHYVDTS   98 (386)
T ss_dssp             HHHHHHHHHHT-EEEESS
T ss_pred             HHHHHHHHHhCCCeeccc
Confidence            556666778888999843

Saccharopine reductase (SR) 1.5.1.10 from EC) catalyses the condensation of l-alpha-aminoadipate-delta-semialdehyde (AASA) with l-glutamate to give an imine, which is reduced by NADPH to give saccharopine []. In some organisms this enzyme is found as a bifunctional polypeptide with lysine ketoglutarate reductase (PF). Saccharopine dehydrogenase can also function as a saccharopine reductase. Homospermidine synthase proteins (2.5.1.44 from EC). Homospermidine synthase (HSS) catalyses the synthesis of the polyamine homospermidine from 2 mol putrescine in an NAD+-dependent reaction [].; GO: 0016491 oxidoreductase activity, 0055114 oxidation-reduction process; PDB: 2AXQ_A 1E5Q_A 1FF9_A 1E5L_A 2PH5_A 3IC5_A 3ABI_A.

>COG2242 CobL Precorrin-6B methylase 2 [Coenzyme metabolism]

Probab=96.98  E-value=0.011  Score=49.14  Aligned_cols=99  Identities=20%  Similarity=0.226  Sum_probs=67.7

Q ss_pred             CCCCCCCEEEEEcCChHHHHHHHHHHHc-CCeEEEEeCCchhHHHH---HHHcCCC--EEecCCCHHHHHHhcCCccEEE
Q 018067          179 GLDKPGMHVGVVGLGGLGHVAVKFAKAM-GVKVTVISTSPSKKSEA---IERLGAD--SFLVSRDQDEMQAAMGTMDGII  252 (361)
Q Consensus       179 ~~~~~g~~vlV~Gag~vG~~a~~la~~~-g~~vi~~~~~~~~~~~~---~~~~g~~--~vv~~~~~~~~~~~~~g~d~vi  252 (361)
                      .++++|+.++=+|+|. |-.++++++.. ..+|+.++++++..+..   +++||.+  .++....++.+..+. .+|.+|
T Consensus        30 L~~~~g~~l~DIGaGt-Gsi~iE~a~~~p~~~v~AIe~~~~a~~~~~~N~~~fg~~n~~vv~g~Ap~~L~~~~-~~daiF  107 (187)
T COG2242          30 LRPRPGDRLWDIGAGT-GSITIEWALAGPSGRVIAIERDEEALELIERNAARFGVDNLEVVEGDAPEALPDLP-SPDAIF  107 (187)
T ss_pred             hCCCCCCEEEEeCCCc-cHHHHHHHHhCCCceEEEEecCHHHHHHHHHHHHHhCCCcEEEEeccchHhhcCCC-CCCEEE
Confidence            3368999666688853 66677888554 45999999988764333   4678876  344445566555444 699998


Q ss_pred             EcCCC--cccHHHHHhccccCCEEEEecC
Q 018067          253 DTVSA--VHPLMPLIGLLKSQGKLVLVGA  279 (361)
Q Consensus       253 d~~g~--~~~~~~~~~~l~~~G~~v~~g~  279 (361)
                      --=|.  +..++.++..|+++|++|.-..
T Consensus       108 IGGg~~i~~ile~~~~~l~~ggrlV~nai  136 (187)
T COG2242         108 IGGGGNIEEILEAAWERLKPGGRLVANAI  136 (187)
T ss_pred             ECCCCCHHHHHHHHHHHcCcCCeEEEEee
Confidence            54332  2346789999999999998754

>PRK12829 short chain dehydrogenase; Provisional

Probab=96.95  E-value=0.0054  Score=54.65  Aligned_cols=77  Identities=19%  Similarity=0.312  Sum_probs=56.1

Q ss_pred             CCCCEEEEEcC-ChHHHHHHHHHHHcCCeEEEEeCCchhHHHHHHHcCCC----EEecCCCHHHHHHh-------cCCcc
Q 018067          182 KPGMHVGVVGL-GGLGHVAVKFAKAMGVKVTVISTSPSKKSEAIERLGAD----SFLVSRDQDEMQAA-------MGTMD  249 (361)
Q Consensus       182 ~~g~~vlV~Ga-g~vG~~a~~la~~~g~~vi~~~~~~~~~~~~~~~~g~~----~vv~~~~~~~~~~~-------~~g~d  249 (361)
                      -++.++||.|+ |.+|..++..+...|++|++++++++....+.+...-.    ...|..+++.+..+       .+++|
T Consensus         9 ~~~~~vlItGa~g~iG~~~a~~L~~~g~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~D~~~~~~~~~~~~~~~~~~~~~d   88 (264)
T PRK12829          9 LDGLRVLVTGGASGIGRAIAEAFAEAGARVHVCDVSEAALAATAARLPGAKVTATVADVADPAQVERVFDTAVERFGGLD   88 (264)
T ss_pred             cCCCEEEEeCCCCcHHHHHHHHHHHCCCEEEEEeCCHHHHHHHHHHHhcCceEEEEccCCCHHHHHHHHHHHHHHhCCCC
Confidence            46789999998 99999999999999999999999877666554444321    23355555433322       25799


Q ss_pred             EEEEcCCCc
Q 018067          250 GIIDTVSAV  258 (361)
Q Consensus       250 ~vid~~g~~  258 (361)
                      +||.++|..
T Consensus        89 ~vi~~ag~~   97 (264)
T PRK12829         89 VLVNNAGIA   97 (264)
T ss_pred             EEEECCCCC
Confidence            999999864

>PRK12367 short chain dehydrogenase; Provisional

Probab=96.93  E-value=0.0055  Score=54.28  Aligned_cols=75  Identities=21%  Similarity=0.293  Sum_probs=52.7

Q ss_pred             CCCEEEEEcC-ChHHHHHHHHHHHcCCeEEEEeCCchhHHHHHHHcCC-CEEecCCCHHHHHHhcCCccEEEEcCCC
Q 018067          183 PGMHVGVVGL-GGLGHVAVKFAKAMGVKVTVISTSPSKKSEAIERLGA-DSFLVSRDQDEMQAAMGTMDGIIDTVSA  257 (361)
Q Consensus       183 ~g~~vlV~Ga-g~vG~~a~~la~~~g~~vi~~~~~~~~~~~~~~~~g~-~~vv~~~~~~~~~~~~~g~d~vid~~g~  257 (361)
                      .+++++|.|+ |++|..+++.+...|++|++++++............. ....|..+.+.+....+++|++|+++|.
T Consensus        13 ~~k~~lITGas~gIG~ala~~l~~~G~~Vi~~~r~~~~~~~~~~~~~~~~~~~D~~~~~~~~~~~~~iDilVnnAG~   89 (245)
T PRK12367         13 QGKRIGITGASGALGKALTKAFRAKGAKVIGLTHSKINNSESNDESPNEWIKWECGKEESLDKQLASLDVLILNHGI   89 (245)
T ss_pred             CCCEEEEEcCCcHHHHHHHHHHHHCCCEEEEEECCchhhhhhhccCCCeEEEeeCCCHHHHHHhcCCCCEEEECCcc
Confidence            4688999997 9999999999999999999998876322221111111 1233555666666666789999999985

>TIGR00507 aroE shikimate 5-dehydrogenase

Probab=96.93  E-value=0.0083  Score=53.99  Aligned_cols=102  Identities=19%  Similarity=0.107  Sum_probs=67.7

Q ss_pred             HhhhcCCCCCCCEEEEEcCChHHHHHHHHHHHcCCeEEEEeCCchhHHHHHHHcCC---CEEecCCCHHHHHHhcCCccE
Q 018067          174 PLRFYGLDKPGMHVGVVGLGGLGHVAVKFAKAMGVKVTVISTSPSKKSEAIERLGA---DSFLVSRDQDEMQAAMGTMDG  250 (361)
Q Consensus       174 ~l~~~~~~~~g~~vlV~Gag~vG~~a~~la~~~g~~vi~~~~~~~~~~~~~~~~g~---~~vv~~~~~~~~~~~~~g~d~  250 (361)
                      ++.+......+++++|+|+|++|.+++..+...|++|+++.++.++.+.+++++..   ...+..  .+   .....+|+
T Consensus       107 ~l~~~~~~~~~k~vliiGaGg~g~aia~~L~~~g~~v~v~~R~~~~~~~la~~~~~~~~~~~~~~--~~---~~~~~~Di  181 (270)
T TIGR00507       107 DLERLIPLRPNQRVLIIGAGGAARAVALPLLKADCNVIIANRTVSKAEELAERFQRYGEIQAFSM--DE---LPLHRVDL  181 (270)
T ss_pred             HHHhcCCCccCCEEEEEcCcHHHHHHHHHHHHCCCEEEEEeCCHHHHHHHHHHHhhcCceEEech--hh---hcccCccE
Confidence            34433333567899999999999999999988899999999988877777666542   112111  11   12246999


Q ss_pred             EEEcCCCccc--H---HHHHhccccCCEEEEecCC
Q 018067          251 IIDTVSAVHP--L---MPLIGLLKSQGKLVLVGAP  280 (361)
Q Consensus       251 vid~~g~~~~--~---~~~~~~l~~~G~~v~~g~~  280 (361)
                      ||++++....  .   ......++++..++++...
T Consensus       182 vInatp~gm~~~~~~~~~~~~~l~~~~~v~D~~y~  216 (270)
T TIGR00507       182 IINATSAGMSGNIDEPPVPAEKLKEGMVVYDMVYN  216 (270)
T ss_pred             EEECCCCCCCCCCCCCCCCHHHcCCCCEEEEeccC
Confidence            9999986420  1   1123456777788877554

This model finds proteins from prokaryotes and functionally equivalent domains from larger, multifunctional proteins of fungi and plants. Below the trusted cutoff of 180, but above the noise cutoff of 20, are the putative shikimate dehydrogenases of Thermotoga maritima and Mycobacterium tuberculosis, and uncharacterized paralogs of shikimate dehydrogenase from E. coli and H. influenzae. The related enzyme quinate 5-dehydrogenase scores below the noise cutoff. A neighbor-joining tree, constructed with quinate 5-dehydrogenases as the outgroup, shows the Clamydial homolog as clustering among the shikimate dehydrogenases, although the sequence is unusual in the degree of sequence divergence and the presence of an additional N-terminal domain.

>PRK08415 enoyl-(acyl carrier protein) reductase; Provisional

Probab=96.92  E-value=0.017  Score=52.01  Aligned_cols=98  Identities=16%  Similarity=0.212  Sum_probs=66.1

Q ss_pred             CCCEEEEEcC---ChHHHHHHHHHHHcCCeEEEEeCCc---hhHHHHHHHcCCCE--EecCCCHHHHHHh-------cCC
Q 018067          183 PGMHVGVVGL---GGLGHVAVKFAKAMGVKVTVISTSP---SKKSEAIERLGADS--FLVSRDQDEMQAA-------MGT  247 (361)
Q Consensus       183 ~g~~vlV~Ga---g~vG~~a~~la~~~g~~vi~~~~~~---~~~~~~~~~~g~~~--vv~~~~~~~~~~~-------~~g  247 (361)
                      .++++||.|+   +++|+++++.+...|++|+++++++   ++...+.++++...  ..|-.+.+.+..+       .+.
T Consensus         4 ~~k~~lItGas~~~GIG~aiA~~la~~G~~Vil~~r~~~~~~~~~~~~~~~~~~~~~~~Dv~d~~~v~~~~~~i~~~~g~   83 (274)
T PRK08415          4 KGKKGLIVGVANNKSIAYGIAKACFEQGAELAFTYLNEALKKRVEPIAQELGSDYVYELDVSKPEHFKSLAESLKKDLGK   83 (274)
T ss_pred             CCcEEEEECCCCCCCHHHHHHHHHHHCCCEEEEEecCHHHHHHHHHHHHhcCCceEEEecCCCHHHHHHHHHHHHHHcCC
Confidence            4688999986   4899999999999999999988774   23344445555432  2355555433322       247


Q ss_pred             ccEEEEcCCCcc-----------------------------cHHHHHhccccCCEEEEecCC
Q 018067          248 MDGIIDTVSAVH-----------------------------PLMPLIGLLKSQGKLVLVGAP  280 (361)
Q Consensus       248 ~d~vid~~g~~~-----------------------------~~~~~~~~l~~~G~~v~~g~~  280 (361)
                      +|++|+++|...                             ..+..+..++++|+++.++..
T Consensus        84 iDilVnnAG~~~~~~~~~~~~~~~~~~~~~~~~vN~~g~~~l~~~~~p~m~~~g~Iv~isS~  145 (274)
T PRK08415         84 IDFIVHSVAFAPKEALEGSFLETSKEAFNIAMEISVYSLIELTRALLPLLNDGASVLTLSYL  145 (274)
T ss_pred             CCEEEECCccCcccccccccccCCHHHHHHHhhhhhHHHHHHHHHHHHHhccCCcEEEEecC
Confidence            999999998410                             123345566778999998764

>PRK08267 short chain dehydrogenase; Provisional

Probab=96.92  E-value=0.014  Score=51.98  Aligned_cols=73  Identities=19%  Similarity=0.282  Sum_probs=53.5

Q ss_pred             CEEEEEcC-ChHHHHHHHHHHHcCCeEEEEeCCchhHHHHHHHcC-CC---EEecCCCHHHHHHh--------cCCccEE
Q 018067          185 MHVGVVGL-GGLGHVAVKFAKAMGVKVTVISTSPSKKSEAIERLG-AD---SFLVSRDQDEMQAA--------MGTMDGI  251 (361)
Q Consensus       185 ~~vlV~Ga-g~vG~~a~~la~~~g~~vi~~~~~~~~~~~~~~~~g-~~---~vv~~~~~~~~~~~--------~~g~d~v  251 (361)
                      +++||.|+ |.+|...++.+...|++|++++++.+...++.+.++ ..   ...|..+.+.+.++        .+++|++
T Consensus         2 k~vlItGasg~iG~~la~~l~~~G~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~D~~~~~~v~~~~~~~~~~~~~~id~v   81 (260)
T PRK08267          2 KSIFITGAASGIGRATALLFAAEGWRVGAYDINEAGLAALAAELGAGNAWTGALDVTDRAAWDAALADFAAATGGRLDVL   81 (260)
T ss_pred             cEEEEeCCCchHHHHHHHHHHHCCCeEEEEeCCHHHHHHHHHHhcCCceEEEEecCCCHHHHHHHHHHHHHHcCCCCCEE
Confidence            46899997 999999999998899999999998887776655543 11   13355554433322        3468999


Q ss_pred             EEcCCC
Q 018067          252 IDTVSA  257 (361)
Q Consensus       252 id~~g~  257 (361)
                      |.++|.
T Consensus        82 i~~ag~   87 (260)
T PRK08267         82 FNNAGI   87 (260)
T ss_pred             EECCCC
Confidence            999985

>COG0169 AroE Shikimate 5-dehydrogenase [Amino acid transport and metabolism]

Probab=96.92  E-value=0.0042  Score=55.81  Aligned_cols=97  Identities=15%  Similarity=0.154  Sum_probs=63.8

Q ss_pred             CCCCEEEEEcCChHHHHHHHHHHHcCC-eEEEEeCCchhHHHHHHHcCCCEE-ecCCCHHHHHHhcCCccEEEEcCCCcc
Q 018067          182 KPGMHVGVVGLGGLGHVAVKFAKAMGV-KVTVISTSPSKKSEAIERLGADSF-LVSRDQDEMQAAMGTMDGIIDTVSAVH  259 (361)
Q Consensus       182 ~~g~~vlV~Gag~vG~~a~~la~~~g~-~vi~~~~~~~~~~~~~~~~g~~~v-v~~~~~~~~~~~~~g~d~vid~~g~~~  259 (361)
                      .+|++++|+|+|+.+.+++.-+...|+ +++++.|+.++.+++++.++.... +............ .+|++||+++...
T Consensus       124 ~~~~~vlilGAGGAarAv~~aL~~~g~~~i~V~NRt~~ra~~La~~~~~~~~~~~~~~~~~~~~~~-~~dliINaTp~Gm  202 (283)
T COG0169         124 VTGKRVLILGAGGAARAVAFALAEAGAKRITVVNRTRERAEELADLFGELGAAVEAAALADLEGLE-EADLLINATPVGM  202 (283)
T ss_pred             cCCCEEEEECCcHHHHHHHHHHHHcCCCEEEEEeCCHHHHHHHHHHhhhccccccccccccccccc-ccCEEEECCCCCC
Confidence            468999999999999999999999996 899999999998888887763210 0001100001111 5899999986532


Q ss_pred             cHH-----HHHhccccCCEEEEecC
Q 018067          260 PLM-----PLIGLLKSQGKLVLVGA  279 (361)
Q Consensus       260 ~~~-----~~~~~l~~~G~~v~~g~  279 (361)
                      ...     .-...+++.-.+..+-.
T Consensus       203 ~~~~~~~~~~~~~l~~~~~v~D~vY  227 (283)
T COG0169         203 AGPEGDSPVPAELLPKGAIVYDVVY  227 (283)
T ss_pred             CCCCCCCCCcHHhcCcCCEEEEecc
Confidence            111     01455566655655543

>PF01262 AlaDh_PNT_C: Alanine dehydrogenase/PNT, C-terminal domain; InterPro: IPR007698 Alanine dehydrogenases (1

Probab=96.91  E-value=0.0028  Score=52.68  Aligned_cols=97  Identities=24%  Similarity=0.319  Sum_probs=64.3

Q ss_pred             CCCEEEEEcCChHHHHHHHHHHHcCCeEEEEeCCchhHHHHHHHcCCCEEecC-C-----------------C--HHHHH
Q 018067          183 PGMHVGVVGLGGLGHVAVKFAKAMGVKVTVISTSPSKKSEAIERLGADSFLVS-R-----------------D--QDEMQ  242 (361)
Q Consensus       183 ~g~~vlV~Gag~vG~~a~~la~~~g~~vi~~~~~~~~~~~~~~~~g~~~vv~~-~-----------------~--~~~~~  242 (361)
                      +..+|+|+|+|.+|+.|+.+++.+|++|++.+...++.++. +..+...+... .                 .  ...+.
T Consensus        19 ~p~~vvv~G~G~vg~gA~~~~~~lGa~v~~~d~~~~~~~~~-~~~~~~~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~f~   97 (168)
T PF01262_consen   19 PPAKVVVTGAGRVGQGAAEIAKGLGAEVVVPDERPERLRQL-ESLGAYFIEVDYEDHLERKDFDKADYYEHPESYESNFA   97 (168)
T ss_dssp             -T-EEEEESTSHHHHHHHHHHHHTT-EEEEEESSHHHHHHH-HHTTTEESEETTTTTTTSB-CCHHHCHHHCCHHHHHHH
T ss_pred             CCeEEEEECCCHHHHHHHHHHhHCCCEEEeccCCHHHHHhh-hcccCceEEEcccccccccccchhhhhHHHHHhHHHHH
Confidence            44779999999999999999999999999999988776666 55665433221 0                 0  12233


Q ss_pred             HhcCCccEEEEcC---C--Cc-ccHHHHHhccccCCEEEEecCC
Q 018067          243 AAMGTMDGIIDTV---S--AV-HPLMPLIGLLKSQGKLVLVGAP  280 (361)
Q Consensus       243 ~~~~g~d~vid~~---g--~~-~~~~~~~~~l~~~G~~v~~g~~  280 (361)
                      +....+|++|.+.   +  .+ ..-...++.|+++.-++++...
T Consensus        98 ~~i~~~d~vI~~~~~~~~~~P~lvt~~~~~~m~~gsvIvDis~D  141 (168)
T PF01262_consen   98 EFIAPADIVIGNGLYWGKRAPRLVTEEMVKSMKPGSVIVDISCD  141 (168)
T ss_dssp             HHHHH-SEEEEHHHBTTSS---SBEHHHHHTSSTTEEEEETTGG
T ss_pred             HHHhhCcEEeeecccCCCCCCEEEEhHHhhccCCCceEEEEEec
Confidence            3334689998643   1  12 1235678889998889998754

4.1.1 from EC) and pyridine nucleotide transhydrogenase (1.6.1.1 from EC) have been shown to share regions of similarity []. Alanine dehydrogenase catalyzes the NAD-dependent reversible reductive amination of pyruvate into alanine. Pyridine nucleotide transhydrogenase catalyzes the reduction of NADP+ to NADPH with the concomitant oxidation of NADH to NAD+. This enzyme is located in the plasma membrane of prokaryotes and in the inner membrane of the mitochondria of eukaryotes. The transhydrogenation between NADH and NADP is coupled with the translocation of a proton across the membrane. In prokaryotes the enzyme is composed of two different subunits, an alpha chain (gene pntA) and a beta chain (gene pntB), while in eukaryotes it is a single chain protein. The sequence of alanine dehydrogenase from several bacterial species are related with those of the alpha subunit of bacterial pyridine nucleotide transhydrogenase and of the N-terminal half of the eukaryotic enzyme. The two most conserved regions correspond respectively to the N-terminal extremity of these proteins and to a central glycine-rich region which is part of the NAD(H)-binding site. This is a C-terminal domain of alanine dehydrogenases (1.4.1.1 from EC). This domain is also found in the lysine 2-oxoglutarate reductases. ; GO: 0016491 oxidoreductase activity, 0055114 oxidation-reduction process; PDB: 1KOL_A 2EEZ_F 1L7E_C 1PTJ_B 1NM5_A 1HZZ_B 1U2G_B 2FSV_A 2FR8_A 1U2D_A ....

>PRK11705 cyclopropane fatty acyl phospholipid synthase; Provisional

Probab=96.91  E-value=0.0098  Score=56.26  Aligned_cols=113  Identities=25%  Similarity=0.205  Sum_probs=74.1

Q ss_pred             cccchhhhhhhhHhhhcCCCCCCCEEEEEcCChHHHHHHHHHHHcCCeEEEEeCCchhHHHHHHHcC-CCEEecCCCHHH
Q 018067          162 APLLCAGITVYSPLRFYGLDKPGMHVGVVGLGGLGHVAVKFAKAMGVKVTVISTSPSKKSEAIERLG-ADSFLVSRDQDE  240 (361)
Q Consensus       162 a~l~~~~~ta~~~l~~~~~~~~g~~vlV~Gag~vG~~a~~la~~~g~~vi~~~~~~~~~~~~~~~~g-~~~vv~~~~~~~  240 (361)
                      .++..+....+..+.+...+++|++||-+|+| .|..+..+++..|++|+.++.+++..+.+.+... ...-+...+   
T Consensus       146 ~~L~~Aq~~k~~~l~~~l~l~~g~rVLDIGcG-~G~~a~~la~~~g~~V~giDlS~~~l~~A~~~~~~l~v~~~~~D---  221 (383)
T PRK11705        146 DTLEEAQEAKLDLICRKLQLKPGMRVLDIGCG-WGGLARYAAEHYGVSVVGVTISAEQQKLAQERCAGLPVEIRLQD---  221 (383)
T ss_pred             CCHHHHHHHHHHHHHHHhCCCCCCEEEEeCCC-ccHHHHHHHHHCCCEEEEEeCCHHHHHHHHHHhccCeEEEEECc---
Confidence            34444555555555555567899999999986 4777888898889999999998877666544332 111111111   


Q ss_pred             HHHhcCCccEEEEc-----CCC---cccHHHHHhccccCCEEEEec
Q 018067          241 MQAAMGTMDGIIDT-----VSA---VHPLMPLIGLLKSQGKLVLVG  278 (361)
Q Consensus       241 ~~~~~~g~d~vid~-----~g~---~~~~~~~~~~l~~~G~~v~~g  278 (361)
                      ...+.+.+|.|+..     +|.   ...+..+.+.|+|+|.++...
T Consensus       222 ~~~l~~~fD~Ivs~~~~ehvg~~~~~~~l~~i~r~LkpGG~lvl~~  267 (383)
T PRK11705        222 YRDLNGQFDRIVSVGMFEHVGPKNYRTYFEVVRRCLKPDGLFLLHT  267 (383)
T ss_pred             hhhcCCCCCEEEEeCchhhCChHHHHHHHHHHHHHcCCCcEEEEEE
Confidence            12234579988643     333   234677888999999998753

>PRK06200 2,3-dihydroxy-2,3-dihydrophenylpropionate dehydrogenase; Provisional

Probab=96.91  E-value=0.0076  Score=53.82  Aligned_cols=75  Identities=23%  Similarity=0.274  Sum_probs=55.3

Q ss_pred             CCCEEEEEcC-ChHHHHHHHHHHHcCCeEEEEeCCchhHHHHHHHcCCC---EEecCCCHHHHHHh-------cCCccEE
Q 018067          183 PGMHVGVVGL-GGLGHVAVKFAKAMGVKVTVISTSPSKKSEAIERLGAD---SFLVSRDQDEMQAA-------MGTMDGI  251 (361)
Q Consensus       183 ~g~~vlV~Ga-g~vG~~a~~la~~~g~~vi~~~~~~~~~~~~~~~~g~~---~vv~~~~~~~~~~~-------~~g~d~v  251 (361)
                      +++++||.|+ |++|..+++.+...|++|+++++++++.+.+.++++..   ...|..+.+.+..+       .+.+|++
T Consensus         5 ~~k~vlVtGas~gIG~~ia~~l~~~G~~V~~~~r~~~~~~~~~~~~~~~~~~~~~D~~~~~~~~~~~~~~~~~~g~id~l   84 (263)
T PRK06200          5 HGQVALITGGGSGIGRALVERFLAEGARVAVLERSAEKLASLRQRFGDHVLVVEGDVTSYADNQRAVDQTVDAFGKLDCF   84 (263)
T ss_pred             CCCEEEEeCCCchHHHHHHHHHHHCCCEEEEEeCCHHHHHHHHHHhCCcceEEEccCCCHHHHHHHHHHHHHhcCCCCEE
Confidence            4678999997 99999999999999999999999888777776665532   12244444333322       2479999


Q ss_pred             EEcCCC
Q 018067          252 IDTVSA  257 (361)
Q Consensus       252 id~~g~  257 (361)
                      |+++|.
T Consensus        85 i~~ag~   90 (263)
T PRK06200         85 VGNAGI   90 (263)
T ss_pred             EECCCC
Confidence            999884

>PRK12429 3-hydroxybutyrate dehydrogenase; Provisional

Probab=96.90  E-value=0.016  Score=51.42  Aligned_cols=75  Identities=21%  Similarity=0.313  Sum_probs=53.9

Q ss_pred             CCCEEEEEcC-ChHHHHHHHHHHHcCCeEEEEeCCchhHHHHHHHc---CCC---EEecCCCHHHHHHh-------cCCc
Q 018067          183 PGMHVGVVGL-GGLGHVAVKFAKAMGVKVTVISTSPSKKSEAIERL---GAD---SFLVSRDQDEMQAA-------MGTM  248 (361)
Q Consensus       183 ~g~~vlV~Ga-g~vG~~a~~la~~~g~~vi~~~~~~~~~~~~~~~~---g~~---~vv~~~~~~~~~~~-------~~g~  248 (361)
                      .++++||.|+ |.+|...+..+...|++|++++++.++...+.+++   +..   ...|..+++.+.++       .+++
T Consensus         3 ~~~~vlItG~sg~iG~~la~~l~~~g~~v~~~~r~~~~~~~~~~~~~~~~~~~~~~~~Dl~~~~~~~~~~~~~~~~~~~~   82 (258)
T PRK12429          3 KGKVALVTGAASGIGLEIALALAKEGAKVVIADLNDEAAAAAAEALQKAGGKAIGVAMDVTDEEAINAGIDYAVETFGGV   82 (258)
T ss_pred             CCCEEEEECCCchHHHHHHHHHHHCCCeEEEEeCCHHHHHHHHHHHHhcCCcEEEEEcCCCCHHHHHHHHHHHHHHcCCC
Confidence            4578999997 99999999999889999999999887665554433   322   22345555443332       2479


Q ss_pred             cEEEEcCCC
Q 018067          249 DGIIDTVSA  257 (361)
Q Consensus       249 d~vid~~g~  257 (361)
                      |++|.++|.
T Consensus        83 d~vi~~a~~   91 (258)
T PRK12429         83 DILVNNAGI   91 (258)
T ss_pred             CEEEECCCC
Confidence            999999874

>PRK03369 murD UDP-N-acetylmuramoyl-L-alanyl-D-glutamate synthetase; Provisional

Probab=96.87  E-value=0.005  Score=60.37  Aligned_cols=74  Identities=18%  Similarity=0.209  Sum_probs=54.1

Q ss_pred             CCCCCEEEEEcCChHHHHHHHHHHHcCCeEEEEeCCchhHHHHHHHcCCCEEecCCCHHHHHHhcCCccEEEEcCCCcc
Q 018067          181 DKPGMHVGVVGLGGLGHVAVKFAKAMGVKVTVISTSPSKKSEAIERLGADSFLVSRDQDEMQAAMGTMDGIIDTVSAVH  259 (361)
Q Consensus       181 ~~~g~~vlV~Gag~vG~~a~~la~~~g~~vi~~~~~~~~~~~~~~~~g~~~vv~~~~~~~~~~~~~g~d~vid~~g~~~  259 (361)
                      +.+|++|+|+|.|..|++++.+++..|++|++.+..+++...+ +++|+..+...+..+.+    ..+|+||.+.|-+.
T Consensus         9 ~~~~~~v~V~G~G~sG~aa~~~L~~~G~~v~~~D~~~~~~~~l-~~~g~~~~~~~~~~~~l----~~~D~VV~SpGi~~   82 (488)
T PRK03369          9 LLPGAPVLVAGAGVTGRAVLAALTRFGARPTVCDDDPDALRPH-AERGVATVSTSDAVQQI----ADYALVVTSPGFRP   82 (488)
T ss_pred             ccCCCeEEEEcCCHHHHHHHHHHHHCCCEEEEEcCCHHHHHHH-HhCCCEEEcCcchHhHh----hcCCEEEECCCCCC
Confidence            4678999999999999999999999999999988765554443 56777433222222222    35799999988753

>COG1052 LdhA Lactate dehydrogenase and related dehydrogenases [Energy production and conversion / Coenzyme metabolism / General function prediction only]

Probab=96.87  E-value=0.015  Score=53.58  Aligned_cols=89  Identities=26%  Similarity=0.352  Sum_probs=63.8

Q ss_pred             CCCCEEEEEcCChHHHHHHHHHHHcCCeEEEEeCCchhHHHHHHHcCCCEEecCCCHHHHHHhcCCccEEEEcC-CCccc
Q 018067          182 KPGMHVGVVGLGGLGHVAVKFAKAMGVKVTVISTSPSKKSEAIERLGADSFLVSRDQDEMQAAMGTMDGIIDTV-SAVHP  260 (361)
Q Consensus       182 ~~g~~vlV~Gag~vG~~a~~la~~~g~~vi~~~~~~~~~~~~~~~~g~~~vv~~~~~~~~~~~~~g~d~vid~~-g~~~~  260 (361)
                      -.|+++-|+|.|.||++.+..++.+|++|+..++.+.  .+..+.+++..+    +   +.++-...|++.-.. .++.+
T Consensus       144 l~gktvGIiG~GrIG~avA~r~~~Fgm~v~y~~~~~~--~~~~~~~~~~y~----~---l~ell~~sDii~l~~Plt~~T  214 (324)
T COG1052         144 LRGKTLGIIGLGRIGQAVARRLKGFGMKVLYYDRSPN--PEAEKELGARYV----D---LDELLAESDIISLHCPLTPET  214 (324)
T ss_pred             CCCCEEEEECCCHHHHHHHHHHhcCCCEEEEECCCCC--hHHHhhcCceec----c---HHHHHHhCCEEEEeCCCChHH
Confidence            3589999999999999999999999999999988864  233244455433    1   334445688885544 44332


Q ss_pred             H----HHHHhccccCCEEEEecC
Q 018067          261 L----MPLIGLLKSQGKLVLVGA  279 (361)
Q Consensus       261 ~----~~~~~~l~~~G~~v~~g~  279 (361)
                      -    ...+..|++++.+|.++.
T Consensus       215 ~hLin~~~l~~mk~ga~lVNtaR  237 (324)
T COG1052         215 RHLINAEELAKMKPGAILVNTAR  237 (324)
T ss_pred             hhhcCHHHHHhCCCCeEEEECCC
Confidence            1    257788899999998875

>PRK12549 shikimate 5-dehydrogenase; Reviewed

Probab=96.87  E-value=0.005  Score=55.76  Aligned_cols=95  Identities=19%  Similarity=0.264  Sum_probs=62.7

Q ss_pred             CCCCEEEEEcCChHHHHHHHHHHHcCC-eEEEEeCCchhHHHHHHHcCC----CEEecCCCHHHHHHhcCCccEEEEcCC
Q 018067          182 KPGMHVGVVGLGGLGHVAVKFAKAMGV-KVTVISTSPSKKSEAIERLGA----DSFLVSRDQDEMQAAMGTMDGIIDTVS  256 (361)
Q Consensus       182 ~~g~~vlV~Gag~vG~~a~~la~~~g~-~vi~~~~~~~~~~~~~~~~g~----~~vv~~~~~~~~~~~~~g~d~vid~~g  256 (361)
                      ..+++|+|+|+|++|.+++..+...|+ ++++++++.++.+.++++++.    ..+....   .+.+....+|+||+|+.
T Consensus       125 ~~~k~vlIlGaGGaaraia~aL~~~G~~~I~I~nR~~~ka~~la~~l~~~~~~~~~~~~~---~~~~~~~~aDiVInaTp  201 (284)
T PRK12549        125 ASLERVVQLGAGGAGAAVAHALLTLGVERLTIFDVDPARAAALADELNARFPAARATAGS---DLAAALAAADGLVHATP  201 (284)
T ss_pred             ccCCEEEEECCcHHHHHHHHHHHHcCCCEEEEECCCHHHHHHHHHHHHhhCCCeEEEecc---chHhhhCCCCEEEECCc
Confidence            356889999999999999999999998 899999998888888776642    1222211   12223357999999954


Q ss_pred             Ccc--c--HHHHHhccccCCEEEEecC
Q 018067          257 AVH--P--LMPLIGLLKSQGKLVLVGA  279 (361)
Q Consensus       257 ~~~--~--~~~~~~~l~~~G~~v~~g~  279 (361)
                      ...  .  .....+.++++..+.++-.
T Consensus       202 ~Gm~~~~~~~~~~~~l~~~~~v~DivY  228 (284)
T PRK12549        202 TGMAKHPGLPLPAELLRPGLWVADIVY  228 (284)
T ss_pred             CCCCCCCCCCCCHHHcCCCcEEEEeee
Confidence            221  0  1112244666666655544

>PRK14194 bifunctional 5,10-methylene-tetrahydrofolate dehydrogenase/ 5,10-methylene-tetrahydrofolate cyclohydrolase; Provisional

Probab=96.86  E-value=0.0083  Score=54.22  Aligned_cols=96  Identities=19%  Similarity=0.147  Sum_probs=74.8

Q ss_pred             cccchhhhhhhhHhhhcCCCCCCCEEEEEcC-ChHHHHHHHHHHHcCCeEEEEeCCchhHHHHHHHcCCCEEecCCCHHH
Q 018067          162 APLLCAGITVYSPLRFYGLDKPGMHVGVVGL-GGLGHVAVKFAKAMGVKVTVISTSPSKKSEAIERLGADSFLVSRDQDE  240 (361)
Q Consensus       162 a~l~~~~~ta~~~l~~~~~~~~g~~vlV~Ga-g~vG~~a~~la~~~g~~vi~~~~~~~~~~~~~~~~g~~~vv~~~~~~~  240 (361)
                      ..+||+..+....++...---.|++|.|+|. +.+|.-.+.++...|++|++..+....                     
T Consensus       137 ~~~PcTp~aii~lL~~~~i~l~Gk~V~vIG~s~ivG~PmA~~L~~~gatVtv~~~~t~~---------------------  195 (301)
T PRK14194        137 VLTPCTPSGCLRLLEDTCGDLTGKHAVVIGRSNIVGKPMAALLLQAHCSVTVVHSRSTD---------------------  195 (301)
T ss_pred             CCCCCcHHHHHHHHHHhCCCCCCCEEEEECCCCccHHHHHHHHHHCCCEEEEECCCCCC---------------------
Confidence            3567777777887877764468999999998 599999999999999999988665432                     


Q ss_pred             HHHhcCCccEEEEcCCCcccHHHHHhccccCCEEEEecCC
Q 018067          241 MQAAMGTMDGIIDTVSAVHPLMPLIGLLKSQGKLVLVGAP  280 (361)
Q Consensus       241 ~~~~~~g~d~vid~~g~~~~~~~~~~~l~~~G~~v~~g~~  280 (361)
                      ..+....+|+||-++|.+..+...+  +++|..++.+|..
T Consensus       196 l~e~~~~ADIVIsavg~~~~v~~~~--ik~GaiVIDvgin  233 (301)
T PRK14194        196 AKALCRQADIVVAAVGRPRLIDADW--LKPGAVVIDVGIN  233 (301)
T ss_pred             HHHHHhcCCEEEEecCChhcccHhh--ccCCcEEEEeccc
Confidence            2334456899999999987555444  8999999999854

>PRK06500 short chain dehydrogenase; Provisional

Probab=96.85  E-value=0.0082  Score=52.93  Aligned_cols=75  Identities=21%  Similarity=0.311  Sum_probs=55.0

Q ss_pred             CCCEEEEEcC-ChHHHHHHHHHHHcCCeEEEEeCCchhHHHHHHHcCCCE---EecCCCHHHHHH-------hcCCccEE
Q 018067          183 PGMHVGVVGL-GGLGHVAVKFAKAMGVKVTVISTSPSKKSEAIERLGADS---FLVSRDQDEMQA-------AMGTMDGI  251 (361)
Q Consensus       183 ~g~~vlV~Ga-g~vG~~a~~la~~~g~~vi~~~~~~~~~~~~~~~~g~~~---vv~~~~~~~~~~-------~~~g~d~v  251 (361)
                      ++++++|.|+ |.+|...++.+...|++|++++++.++...+.++++...   ..|..+.+.+..       ..+++|++
T Consensus         5 ~~k~vlItGasg~iG~~la~~l~~~g~~v~~~~r~~~~~~~~~~~~~~~~~~~~~D~~~~~~~~~~~~~~~~~~~~id~v   84 (249)
T PRK06500          5 QGKTALITGGTSGIGLETARQFLAEGARVAITGRDPASLEAARAELGESALVIRADAGDVAAQKALAQALAEAFGRLDAV   84 (249)
T ss_pred             CCCEEEEeCCCchHHHHHHHHHHHCCCEEEEecCCHHHHHHHHHHhCCceEEEEecCCCHHHHHHHHHHHHHHhCCCCEE
Confidence            4678999998 999999999999999999999988776666666666532   124444332222       22479999


Q ss_pred             EEcCCC
Q 018067          252 IDTVSA  257 (361)
Q Consensus       252 id~~g~  257 (361)
                      |+++|.
T Consensus        85 i~~ag~   90 (249)
T PRK06500         85 FINAGV   90 (249)
T ss_pred             EECCCC
Confidence            999884

>PRK07814 short chain dehydrogenase; Provisional

Probab=96.85  E-value=0.0067  Score=54.22  Aligned_cols=75  Identities=19%  Similarity=0.257  Sum_probs=54.5

Q ss_pred             CCCEEEEEcC-ChHHHHHHHHHHHcCCeEEEEeCCchhHHHHHHHc---CCC-E--EecCCCHHHHHHh-------cCCc
Q 018067          183 PGMHVGVVGL-GGLGHVAVKFAKAMGVKVTVISTSPSKKSEAIERL---GAD-S--FLVSRDQDEMQAA-------MGTM  248 (361)
Q Consensus       183 ~g~~vlV~Ga-g~vG~~a~~la~~~g~~vi~~~~~~~~~~~~~~~~---g~~-~--vv~~~~~~~~~~~-------~~g~  248 (361)
                      ++.++||.|+ |.+|...++.+...|++|++++++.++...+.+.+   +.. .  ..|..+++.+.++       .+++
T Consensus         9 ~~~~vlItGasggIG~~~a~~l~~~G~~Vi~~~r~~~~~~~~~~~l~~~~~~~~~~~~D~~~~~~~~~~~~~~~~~~~~i   88 (263)
T PRK07814          9 DDQVAVVTGAGRGLGAAIALAFAEAGADVLIAARTESQLDEVAEQIRAAGRRAHVVAADLAHPEATAGLAGQAVEAFGRL   88 (263)
T ss_pred             CCCEEEEECCCChHHHHHHHHHHHCCCEEEEEeCCHHHHHHHHHHHHhcCCcEEEEEccCCCHHHHHHHHHHHHHHcCCC
Confidence            5788999997 89999999999999999999999877665554433   322 1  2455565544332       2479


Q ss_pred             cEEEEcCCC
Q 018067          249 DGIIDTVSA  257 (361)
Q Consensus       249 d~vid~~g~  257 (361)
                      |++|+++|.
T Consensus        89 d~vi~~Ag~   97 (263)
T PRK07814         89 DIVVNNVGG   97 (263)
T ss_pred             CEEEECCCC
Confidence            999999874

>TIGR02992 ectoine_eutC ectoine utilization protein EutC

Probab=96.84  E-value=0.011  Score=54.61  Aligned_cols=104  Identities=17%  Similarity=0.231  Sum_probs=70.5

Q ss_pred             CCCCEEEEEcCChHHHHHHHHHH-HcCC-eEEEEeCCchhHHHHHHHc----CCCEEecCCCHHHHHHhcCCccEEEEcC
Q 018067          182 KPGMHVGVVGLGGLGHVAVKFAK-AMGV-KVTVISTSPSKKSEAIERL----GADSFLVSRDQDEMQAAMGTMDGIIDTV  255 (361)
Q Consensus       182 ~~g~~vlV~Gag~vG~~a~~la~-~~g~-~vi~~~~~~~~~~~~~~~~----g~~~vv~~~~~~~~~~~~~g~d~vid~~  255 (361)
                      +...+++|+|+|..+.+.+..+. ..+. +|.+..++.++.+.+++++    |.+ +....+   +.+...++|+|+.++
T Consensus       127 ~~~~~v~iiGaG~qA~~~~~al~~~~~i~~v~V~~R~~~~a~~~a~~~~~~~g~~-v~~~~~---~~~av~~aDiVvtaT  202 (326)
T TIGR02992       127 EDSSVVAIFGAGMQARLQLEALTLVRDIRSARIWARDSAKAEALALQLSSLLGID-VTAATD---PRAAMSGADIIVTTT  202 (326)
T ss_pred             CCCcEEEEECCCHHHHHHHHHHHHhCCccEEEEECCCHHHHHHHHHHHHhhcCce-EEEeCC---HHHHhccCCEEEEec
Confidence            45678999999999988888776 4776 7889999988887777665    432 222222   334446899999999


Q ss_pred             CCcccHHHHHhccccCCEEEEecCCCC-CcccChHH
Q 018067          256 SAVHPLMPLIGLLKSQGKLVLVGAPEK-PLELPAFS  290 (361)
Q Consensus       256 g~~~~~~~~~~~l~~~G~~v~~g~~~~-~~~~~~~~  290 (361)
                      +.... -...+.++++-.+..+|.... .-+++..-
T Consensus       203 ~s~~p-~i~~~~l~~g~~i~~vg~~~p~~rEld~~~  237 (326)
T TIGR02992       203 PSETP-ILHAEWLEPGQHVTAMGSDAEHKNEIDPAV  237 (326)
T ss_pred             CCCCc-EecHHHcCCCcEEEeeCCCCCCceecCHHH
Confidence            87542 222346788888888886532 33444433

Members of this protein family are EutA, a predicted arylmalonate decarboxylase found in a conserved ectoine utilization operon of species that include Sinorhizobium meliloti 1021 (where it is known to be induced by ectoine), Mesorhizobium loti, Silicibacter pomeroyi, Agrobacterium tumefaciens, and Pseudomonas putida. This family belongs to the ornithine cyclodeaminase/mu-crystallin family (pfam02423).

>PRK07340 ornithine cyclodeaminase; Validated

Probab=96.84  E-value=0.013  Score=53.75  Aligned_cols=108  Identities=18%  Similarity=0.146  Sum_probs=75.9

Q ss_pred             hhcCCCCCCCEEEEEcCChHHHHHHHHHHH-cCC-eEEEEeCCchhHHHHHHHcCCC--EEecCCCHHHHHHhcCCccEE
Q 018067          176 RFYGLDKPGMHVGVVGLGGLGHVAVKFAKA-MGV-KVTVISTSPSKKSEAIERLGAD--SFLVSRDQDEMQAAMGTMDGI  251 (361)
Q Consensus       176 ~~~~~~~~g~~vlV~Gag~vG~~a~~la~~-~g~-~vi~~~~~~~~~~~~~~~~g~~--~vv~~~~~~~~~~~~~g~d~v  251 (361)
                      +..++ ....+++|+|+|..|.+.+..+.. .+. +|.+..++.++...+++++...  .+. .   +...+...++|+|
T Consensus       118 ~~La~-~~~~~v~IiGaG~qa~~~~~al~~~~~~~~v~v~~r~~~~a~~~a~~~~~~~~~~~-~---~~~~~av~~aDiV  192 (304)
T PRK07340        118 RTLAP-APPGDLLLIGTGVQARAHLEAFAAGLPVRRVWVRGRTAASAAAFCAHARALGPTAE-P---LDGEAIPEAVDLV  192 (304)
T ss_pred             HHhCC-CCCCEEEEECCcHHHHHHHHHHHHhCCCCEEEEEcCCHHHHHHHHHHHHhcCCeeE-E---CCHHHHhhcCCEE
Confidence            33443 567889999999999999998865 675 7888889988888887777421  111 1   2223344689999


Q ss_pred             EEcCCCcccHHHHHhccccCCEEEEecCCCC-CcccChHH
Q 018067          252 IDTVSAVHPLMPLIGLLKSQGKLVLVGAPEK-PLELPAFS  290 (361)
Q Consensus       252 id~~g~~~~~~~~~~~l~~~G~~v~~g~~~~-~~~~~~~~  290 (361)
                      +.++.+...+-..  .+++|-.+..+|.... .-+++...
T Consensus       193 itaT~s~~Pl~~~--~~~~g~hi~~iGs~~p~~~El~~~~  230 (304)
T PRK07340        193 VTATTSRTPVYPE--AARAGRLVVAVGAFTPDMAELAPRT  230 (304)
T ss_pred             EEccCCCCceeCc--cCCCCCEEEecCCCCCCcccCCHHH
Confidence            9999886644444  3789989999997653 34566443

>PRK07832 short chain dehydrogenase; Provisional

Probab=96.83  E-value=0.018  Score=51.64  Aligned_cols=72  Identities=19%  Similarity=0.284  Sum_probs=51.1

Q ss_pred             EEEEEcC-ChHHHHHHHHHHHcCCeEEEEeCCchhHHHHHHHc---CCC----EEecCCCHHHHHHh-------cCCccE
Q 018067          186 HVGVVGL-GGLGHVAVKFAKAMGVKVTVISTSPSKKSEAIERL---GAD----SFLVSRDQDEMQAA-------MGTMDG  250 (361)
Q Consensus       186 ~vlV~Ga-g~vG~~a~~la~~~g~~vi~~~~~~~~~~~~~~~~---g~~----~vv~~~~~~~~~~~-------~~g~d~  250 (361)
                      +++|+|+ |++|..+++.+...|++|++++++++....+.+++   +..    ...|..+++.+.++       .+++|+
T Consensus         2 ~vlItGas~giG~~la~~la~~G~~vv~~~r~~~~~~~~~~~~~~~~~~~~~~~~~D~~~~~~~~~~~~~~~~~~~~id~   81 (272)
T PRK07832          2 RCFVTGAASGIGRATALRLAAQGAELFLTDRDADGLAQTVADARALGGTVPEHRALDISDYDAVAAFAADIHAAHGSMDV   81 (272)
T ss_pred             EEEEeCCCCHHHHHHHHHHHHCCCEEEEEeCCHHHHHHHHHHHHhcCCCcceEEEeeCCCHHHHHHHHHHHHHhcCCCCE
Confidence            6899987 99999999999999999999988876655544332   332    12455555433322       246999


Q ss_pred             EEEcCCC
Q 018067          251 IIDTVSA  257 (361)
Q Consensus       251 vid~~g~  257 (361)
                      +|+++|.
T Consensus        82 lv~~ag~   88 (272)
T PRK07832         82 VMNIAGI   88 (272)
T ss_pred             EEECCCC
Confidence            9999985

>PRK07825 short chain dehydrogenase; Provisional

Probab=96.83  E-value=0.0079  Score=54.00  Aligned_cols=74  Identities=22%  Similarity=0.356  Sum_probs=55.1

Q ss_pred             CCEEEEEcC-ChHHHHHHHHHHHcCCeEEEEeCCchhHHHHHHHcC-CC-EEecCCCHHHHHH-------hcCCccEEEE
Q 018067          184 GMHVGVVGL-GGLGHVAVKFAKAMGVKVTVISTSPSKKSEAIERLG-AD-SFLVSRDQDEMQA-------AMGTMDGIID  253 (361)
Q Consensus       184 g~~vlV~Ga-g~vG~~a~~la~~~g~~vi~~~~~~~~~~~~~~~~g-~~-~vv~~~~~~~~~~-------~~~g~d~vid  253 (361)
                      +.++||.|+ |++|..+++.+...|++|+++++++++...+.+.++ .. ...|..+++.+.+       ..+++|++|+
T Consensus         5 ~~~ilVtGasggiG~~la~~l~~~G~~v~~~~r~~~~~~~~~~~~~~~~~~~~D~~~~~~~~~~~~~~~~~~~~id~li~   84 (273)
T PRK07825          5 GKVVAITGGARGIGLATARALAALGARVAIGDLDEALAKETAAELGLVVGGPLDVTDPASFAAFLDAVEADLGPIDVLVN   84 (273)
T ss_pred             CCEEEEeCCCchHHHHHHHHHHHCCCEEEEEECCHHHHHHHHHHhccceEEEccCCCHHHHHHHHHHHHHHcCCCCEEEE
Confidence            578999998 999999999888899999999998887766666655 32 2235555543322       2257999999


Q ss_pred             cCCC
Q 018067          254 TVSA  257 (361)
Q Consensus       254 ~~g~  257 (361)
                      ++|.
T Consensus        85 ~ag~   88 (273)
T PRK07825         85 NAGV   88 (273)
T ss_pred             CCCc
Confidence            9884

>PRK05866 short chain dehydrogenase; Provisional

Probab=96.83  E-value=0.0058  Score=55.72  Aligned_cols=75  Identities=21%  Similarity=0.347  Sum_probs=53.7

Q ss_pred             CCCEEEEEcC-ChHHHHHHHHHHHcCCeEEEEeCCchhHHHHHHHc---CCCE---EecCCCHHHHHHh-------cCCc
Q 018067          183 PGMHVGVVGL-GGLGHVAVKFAKAMGVKVTVISTSPSKKSEAIERL---GADS---FLVSRDQDEMQAA-------MGTM  248 (361)
Q Consensus       183 ~g~~vlV~Ga-g~vG~~a~~la~~~g~~vi~~~~~~~~~~~~~~~~---g~~~---vv~~~~~~~~~~~-------~~g~  248 (361)
                      .+.+++|.|+ |++|...++.+...|++|++++++.++.+++.+++   +.+.   ..|..+.+.+.++       .+++
T Consensus        39 ~~k~vlItGasggIG~~la~~La~~G~~Vi~~~R~~~~l~~~~~~l~~~~~~~~~~~~Dl~d~~~v~~~~~~~~~~~g~i  118 (293)
T PRK05866         39 TGKRILLTGASSGIGEAAAEQFARRGATVVAVARREDLLDAVADRITRAGGDAMAVPCDLSDLDAVDALVADVEKRIGGV  118 (293)
T ss_pred             CCCEEEEeCCCcHHHHHHHHHHHHCCCEEEEEECCHHHHHHHHHHHHhcCCcEEEEEccCCCHHHHHHHHHHHHHHcCCC
Confidence            4578999997 99999999999889999999999887765554433   3221   2344454433322       2479


Q ss_pred             cEEEEcCCC
Q 018067          249 DGIIDTVSA  257 (361)
Q Consensus       249 d~vid~~g~  257 (361)
                      |++|+++|.
T Consensus       119 d~li~~AG~  127 (293)
T PRK05866        119 DILINNAGR  127 (293)
T ss_pred             CEEEECCCC
Confidence            999999985

>PRK14191 bifunctional 5,10-methylene-tetrahydrofolate dehydrogenase/ 5,10-methylene-tetrahydrofolate cyclohydrolase; Provisional

Probab=96.82  E-value=0.016  Score=52.05  Aligned_cols=96  Identities=16%  Similarity=0.182  Sum_probs=73.5

Q ss_pred             cccchhhhhhhhHhhhcCCCCCCCEEEEEcCC-hHHHHHHHHHHHcCCeEEEEeCCchhHHHHHHHcCCCEEecCCCHHH
Q 018067          162 APLLCAGITVYSPLRFYGLDKPGMHVGVVGLG-GLGHVAVKFAKAMGVKVTVISTSPSKKSEAIERLGADSFLVSRDQDE  240 (361)
Q Consensus       162 a~l~~~~~ta~~~l~~~~~~~~g~~vlV~Gag-~vG~~a~~la~~~g~~vi~~~~~~~~~~~~~~~~g~~~vv~~~~~~~  240 (361)
                      ...||+..+....++...---.|++|+|+|.| .+|.-.+.++...|++|++..+....                     
T Consensus       135 ~~~PcTp~avi~lL~~~~i~l~Gk~vvVvGrs~~VG~Pla~lL~~~gAtVtv~hs~t~~---------------------  193 (285)
T PRK14191        135 GFVPATPMGVMRLLKHYHIEIKGKDVVIIGASNIVGKPLAMLMLNAGASVSVCHILTKD---------------------  193 (285)
T ss_pred             CCCCCcHHHHHHHHHHhCCCCCCCEEEEECCCchhHHHHHHHHHHCCCEEEEEeCCcHH---------------------
Confidence            35677777778878776643579999999985 99999999999999999877543322                     


Q ss_pred             HHHhcCCccEEEEcCCCcccHHHHHhccccCCEEEEecCC
Q 018067          241 MQAAMGTMDGIIDTVSAVHPLMPLIGLLKSQGKLVLVGAP  280 (361)
Q Consensus       241 ~~~~~~g~d~vid~~g~~~~~~~~~~~l~~~G~~v~~g~~  280 (361)
                      +.+....+|+++-++|.+..+.  -+.+++|..++.+|..
T Consensus       194 l~~~~~~ADIvV~AvG~p~~i~--~~~vk~GavVIDvGi~  231 (285)
T PRK14191        194 LSFYTQNADIVCVGVGKPDLIK--ASMVKKGAVVVDIGIN  231 (285)
T ss_pred             HHHHHHhCCEEEEecCCCCcCC--HHHcCCCcEEEEeecc
Confidence            2234456899999999987432  4577999999999964

>PRK13394 3-hydroxybutyrate dehydrogenase; Provisional

Probab=96.79  E-value=0.018  Score=51.10  Aligned_cols=75  Identities=16%  Similarity=0.308  Sum_probs=53.7

Q ss_pred             CCCEEEEEcC-ChHHHHHHHHHHHcCCeEEEEeCCchhHHHHHHH---cCCCEE---ecCCCHHHHHHh-------cCCc
Q 018067          183 PGMHVGVVGL-GGLGHVAVKFAKAMGVKVTVISTSPSKKSEAIER---LGADSF---LVSRDQDEMQAA-------MGTM  248 (361)
Q Consensus       183 ~g~~vlV~Ga-g~vG~~a~~la~~~g~~vi~~~~~~~~~~~~~~~---~g~~~v---v~~~~~~~~~~~-------~~g~  248 (361)
                      ++.++||.|+ |.+|..+++.+...|++|+++++++++..++.++   .+.+..   .|..+.+.+..+       .+++
T Consensus         6 ~~~~vlItGasg~iG~~la~~l~~~G~~v~~~~r~~~~~~~~~~~~~~~~~~~~~~~~Dl~~~~~~~~~~~~~~~~~~~~   85 (262)
T PRK13394          6 NGKTAVVTGAASGIGKEIALELARAGAAVAIADLNQDGANAVADEINKAGGKAIGVAMDVTNEDAVNAGIDKVAERFGSV   85 (262)
T ss_pred             CCCEEEEECCCChHHHHHHHHHHHCCCeEEEEeCChHHHHHHHHHHHhcCceEEEEECCCCCHHHHHHHHHHHHHHcCCC
Confidence            4788999998 9999999999999999999999988665554443   343321   244454433322       2469


Q ss_pred             cEEEEcCCC
Q 018067          249 DGIIDTVSA  257 (361)
Q Consensus       249 d~vid~~g~  257 (361)
                      |++|.++|.
T Consensus        86 d~vi~~ag~   94 (262)
T PRK13394         86 DILVSNAGI   94 (262)
T ss_pred             CEEEECCcc
Confidence            999999985

>PRK12809 putative oxidoreductase Fe-S binding subunit; Reviewed

Probab=96.79  E-value=0.0064  Score=61.68  Aligned_cols=76  Identities=21%  Similarity=0.291  Sum_probs=56.0

Q ss_pred             CCCEEEEEcCChHHHHHHHHHHHcCCeEEEEeCCch--------------------hHHHHHHHcCCCEEecCCC--HHH
Q 018067          183 PGMHVGVVGLGGLGHVAVKFAKAMGVKVTVISTSPS--------------------KKSEAIERLGADSFLVSRD--QDE  240 (361)
Q Consensus       183 ~g~~vlV~Gag~vG~~a~~la~~~g~~vi~~~~~~~--------------------~~~~~~~~~g~~~vv~~~~--~~~  240 (361)
                      .+++|+|+|+|+.|+.++..++..|.+|+++.+.+.                    ...+..+++|++..++..-  .-.
T Consensus       309 ~~kkVaIIG~GpaGl~aA~~L~~~G~~Vtv~e~~~~~GG~l~~gip~~~l~~~~~~~~~~~~~~~Gv~~~~~~~v~~~~~  388 (639)
T PRK12809        309 RSEKVAVIGAGPAGLGCADILARAGVQVDVFDRHPEIGGMLTFGIPPFKLDKTVLSQRREIFTAMGIDFHLNCEIGRDIT  388 (639)
T ss_pred             CCCEEEEECcCHHHHHHHHHHHHcCCcEEEEeCCCCCCCeeeccCCcccCCHHHHHHHHHHHHHCCeEEEcCCccCCcCC
Confidence            489999999999999999999999999999886652                    1234446778765544321  112


Q ss_pred             HHHhcCCccEEEEcCCCc
Q 018067          241 MQAAMGTMDGIIDTVSAV  258 (361)
Q Consensus       241 ~~~~~~g~d~vid~~g~~  258 (361)
                      +..+..++|.||.++|..
T Consensus       389 ~~~l~~~~DaV~latGa~  406 (639)
T PRK12809        389 FSDLTSEYDAVFIGVGTY  406 (639)
T ss_pred             HHHHHhcCCEEEEeCCCC
Confidence            334556899999999974

>PRK06718 precorrin-2 dehydrogenase; Reviewed

Probab=96.79  E-value=0.015  Score=49.78  Aligned_cols=94  Identities=14%  Similarity=0.055  Sum_probs=60.2

Q ss_pred             CCCEEEEEcCChHHHHHHHHHHHcCCeEEEEeCCch-hHHHHHHHcCCCEEecCCCHHHHHHhcCCccEEEEcCCCcccH
Q 018067          183 PGMHVGVVGLGGLGHVAVKFAKAMGVKVTVISTSPS-KKSEAIERLGADSFLVSRDQDEMQAAMGTMDGIIDTVSAVHPL  261 (361)
Q Consensus       183 ~g~~vlV~Gag~vG~~a~~la~~~g~~vi~~~~~~~-~~~~~~~~~g~~~vv~~~~~~~~~~~~~g~d~vid~~g~~~~~  261 (361)
                      .|.+|||+|+|.+|...+..+...|++|+++..... ....+... +.- .+....  .......++|+||-+++.+. +
T Consensus         9 ~~k~vLVIGgG~va~~ka~~Ll~~ga~V~VIs~~~~~~l~~l~~~-~~i-~~~~~~--~~~~~l~~adlViaaT~d~e-l   83 (202)
T PRK06718          9 SNKRVVIVGGGKVAGRRAITLLKYGAHIVVISPELTENLVKLVEE-GKI-RWKQKE--FEPSDIVDAFLVIAATNDPR-V   83 (202)
T ss_pred             CCCEEEEECCCHHHHHHHHHHHHCCCeEEEEcCCCCHHHHHHHhC-CCE-EEEecC--CChhhcCCceEEEEcCCCHH-H
Confidence            578999999999999999999889999988875432 22333222 211 111111  11122347999999999987 6


Q ss_pred             HHHHhccccCCEEEEecCCC
Q 018067          262 MPLIGLLKSQGKLVLVGAPE  281 (361)
Q Consensus       262 ~~~~~~l~~~G~~v~~g~~~  281 (361)
                      +..+...+..+.++.+...+
T Consensus        84 N~~i~~~a~~~~lvn~~d~~  103 (202)
T PRK06718         84 NEQVKEDLPENALFNVITDA  103 (202)
T ss_pred             HHHHHHHHHhCCcEEECCCC
Confidence            65555444556677775543

>PRK07063 short chain dehydrogenase; Provisional

Probab=96.77  E-value=0.0076  Score=53.67  Aligned_cols=75  Identities=20%  Similarity=0.273  Sum_probs=54.0

Q ss_pred             CCCEEEEEcC-ChHHHHHHHHHHHcCCeEEEEeCCchhHHHHHHHc-----CCC---EEecCCCHHHHHHh-------cC
Q 018067          183 PGMHVGVVGL-GGLGHVAVKFAKAMGVKVTVISTSPSKKSEAIERL-----GAD---SFLVSRDQDEMQAA-------MG  246 (361)
Q Consensus       183 ~g~~vlV~Ga-g~vG~~a~~la~~~g~~vi~~~~~~~~~~~~~~~~-----g~~---~vv~~~~~~~~~~~-------~~  246 (361)
                      .+++++|.|+ |++|..++..+...|++|+++++++++...+.+++     +..   ...|..+++.+..+       .+
T Consensus         6 ~~k~vlVtGas~gIG~~~a~~l~~~G~~vv~~~r~~~~~~~~~~~~~~~~~~~~~~~~~~Dl~~~~~~~~~~~~~~~~~g   85 (260)
T PRK07063          6 AGKVALVTGAAQGIGAAIARAFAREGAAVALADLDAALAERAAAAIARDVAGARVLAVPADVTDAASVAAAVAAAEEAFG   85 (260)
T ss_pred             CCCEEEEECCCchHHHHHHHHHHHCCCEEEEEeCCHHHHHHHHHHHHhccCCceEEEEEccCCCHHHHHHHHHHHHHHhC
Confidence            4678999997 99999999999999999999999887766655443     221   12244554433322       24


Q ss_pred             CccEEEEcCCC
Q 018067          247 TMDGIIDTVSA  257 (361)
Q Consensus       247 g~d~vid~~g~  257 (361)
                      ++|++|+++|.
T Consensus        86 ~id~li~~ag~   96 (260)
T PRK07063         86 PLDVLVNNAGI   96 (260)
T ss_pred             CCcEEEECCCc
Confidence            79999999984

>CHL00194 ycf39 Ycf39; Provisional

Probab=96.74  E-value=0.017  Score=53.19  Aligned_cols=94  Identities=20%  Similarity=0.237  Sum_probs=64.7

Q ss_pred             EEEEEcC-ChHHHHHHHHHHHcCCeEEEEeCCchhHHHHHHHcCCCEE-ecCCCHHHHHHhcCCccEEEEcCCCcc----
Q 018067          186 HVGVVGL-GGLGHVAVKFAKAMGVKVTVISTSPSKKSEAIERLGADSF-LVSRDQDEMQAAMGTMDGIIDTVSAVH----  259 (361)
Q Consensus       186 ~vlV~Ga-g~vG~~a~~la~~~g~~vi~~~~~~~~~~~~~~~~g~~~v-v~~~~~~~~~~~~~g~d~vid~~g~~~----  259 (361)
                      +|+|+|+ |-+|...+..+...|.+|++++++.++...+ ...+++.+ .|..+++.+.....++|+||++++...    
T Consensus         2 kIlVtGatG~iG~~lv~~Ll~~g~~V~~l~R~~~~~~~l-~~~~v~~v~~Dl~d~~~l~~al~g~d~Vi~~~~~~~~~~~   80 (317)
T CHL00194          2 SLLVIGATGTLGRQIVRQALDEGYQVRCLVRNLRKASFL-KEWGAELVYGDLSLPETLPPSFKGVTAIIDASTSRPSDLY   80 (317)
T ss_pred             EEEEECCCcHHHHHHHHHHHHCCCeEEEEEcChHHhhhH-hhcCCEEEECCCCCHHHHHHHHCCCCEEEECCCCCCCCcc
Confidence            6999998 9999999999988999999999886554333 33455432 245566667777778999999876421    


Q ss_pred             --------cHHHHHhccccCC--EEEEecCC
Q 018067          260 --------PLMPLIGLLKSQG--KLVLVGAP  280 (361)
Q Consensus       260 --------~~~~~~~~l~~~G--~~v~~g~~  280 (361)
                              .....++.++..|  +++.++..
T Consensus        81 ~~~~~~~~~~~~l~~aa~~~gvkr~I~~Ss~  111 (317)
T CHL00194         81 NAKQIDWDGKLALIEAAKAAKIKRFIFFSIL  111 (317)
T ss_pred             chhhhhHHHHHHHHHHHHHcCCCEEEEeccc
Confidence                    0123444444444  88887763

>COG0373 HemA Glutamyl-tRNA reductase [Coenzyme metabolism]

Probab=96.74  E-value=0.012  Score=55.36  Aligned_cols=96  Identities=27%  Similarity=0.424  Sum_probs=70.5

Q ss_pred             CCCCEEEEEcCChHHHHHHHHHHHcCC-eEEEEeCCchhHHHHHHHcCCCEEecCCCHHHHHHhcCCccEEEEcCCCccc
Q 018067          182 KPGMHVGVVGLGGLGHVAVKFAKAMGV-KVTVISTSPSKKSEAIERLGADSFLVSRDQDEMQAAMGTMDGIIDTVSAVHP  260 (361)
Q Consensus       182 ~~g~~vlV~Gag~vG~~a~~la~~~g~-~vi~~~~~~~~~~~~~~~~g~~~vv~~~~~~~~~~~~~g~d~vid~~g~~~~  260 (361)
                      -.+.++||+|+|-+|..++..+...|. +++++.|+.++-.++++++|+..+    .-+.+...-..+|+||-++|.++.
T Consensus       176 L~~~~vlvIGAGem~~lva~~L~~~g~~~i~IaNRT~erA~~La~~~~~~~~----~l~el~~~l~~~DvVissTsa~~~  251 (414)
T COG0373         176 LKDKKVLVIGAGEMGELVAKHLAEKGVKKITIANRTLERAEELAKKLGAEAV----ALEELLEALAEADVVISSTSAPHP  251 (414)
T ss_pred             cccCeEEEEcccHHHHHHHHHHHhCCCCEEEEEcCCHHHHHHHHHHhCCeee----cHHHHHHhhhhCCEEEEecCCCcc
Confidence            478899999999999999999999996 899999999999999999995532    223334444579999999998752


Q ss_pred             H---HHHHhccccC-C-EEEEecCCC
Q 018067          261 L---MPLIGLLKSQ-G-KLVLVGAPE  281 (361)
Q Consensus       261 ~---~~~~~~l~~~-G-~~v~~g~~~  281 (361)
                      +   ....+.++.. . -+++++.|.
T Consensus       252 ii~~~~ve~a~~~r~~~livDiavPR  277 (414)
T COG0373         252 IITREMVERALKIRKRLLIVDIAVPR  277 (414)
T ss_pred             ccCHHHHHHHHhcccCeEEEEecCCC
Confidence            2   2334444333 2 456677653

>PF13241 NAD_binding_7: Putative NAD(P)-binding; PDB: 3DFZ_B 1PJT_A 1PJS_A 1PJQ_A 1KYQ_B

Probab=96.74  E-value=0.0026  Score=48.19  Aligned_cols=90  Identities=24%  Similarity=0.261  Sum_probs=61.4

Q ss_pred             CCCEEEEEcCChHHHHHHHHHHHcCCeEEEEeCCchhHHHHHHHcCCCEEecCCCHHHHHHhcCCccEEEEcCCCcccHH
Q 018067          183 PGMHVGVVGLGGLGHVAVKFAKAMGVKVTVISTSPSKKSEAIERLGADSFLVSRDQDEMQAAMGTMDGIIDTVSAVHPLM  262 (361)
Q Consensus       183 ~g~~vlV~Gag~vG~~a~~la~~~g~~vi~~~~~~~~~~~~~~~~g~~~vv~~~~~~~~~~~~~g~d~vid~~g~~~~~~  262 (361)
                      .|.+|||+|+|.+|..-++.+...|++|++++...    +..+  +--... .+.   .+....++++||-+.+.+..-.
T Consensus         6 ~~~~vlVvGgG~va~~k~~~Ll~~gA~v~vis~~~----~~~~--~~i~~~-~~~---~~~~l~~~~lV~~at~d~~~n~   75 (103)
T PF13241_consen    6 KGKRVLVVGGGPVAARKARLLLEAGAKVTVISPEI----EFSE--GLIQLI-RRE---FEEDLDGADLVFAATDDPELNE   75 (103)
T ss_dssp             TT-EEEEEEESHHHHHHHHHHCCCTBEEEEEESSE----HHHH--TSCEEE-ESS----GGGCTTESEEEE-SS-HHHHH
T ss_pred             CCCEEEEECCCHHHHHHHHHHHhCCCEEEEECCch----hhhh--hHHHHH-hhh---HHHHHhhheEEEecCCCHHHHH
Confidence            57899999999999999999999999999998876    1112  211111 111   1233468999999999887444


Q ss_pred             HHHhccccCCEEEEecCCCC
Q 018067          263 PLIGLLKSQGKLVLVGAPEK  282 (361)
Q Consensus       263 ~~~~~l~~~G~~v~~g~~~~  282 (361)
                      ...+..+..|..+.+...+.
T Consensus        76 ~i~~~a~~~~i~vn~~D~p~   95 (103)
T PF13241_consen   76 AIYADARARGILVNVVDDPE   95 (103)
T ss_dssp             HHHHHHHHTTSEEEETT-CC
T ss_pred             HHHHHHhhCCEEEEECCCcC
Confidence            56666677899999877543

>TIGR03325 BphB_TodD cis-2,3-dihydrobiphenyl-2,3-diol dehydrogenase

Probab=96.73  E-value=0.011  Score=52.68  Aligned_cols=75  Identities=27%  Similarity=0.284  Sum_probs=53.7

Q ss_pred             CCCEEEEEcC-ChHHHHHHHHHHHcCCeEEEEeCCchhHHHHHHHcCCC---EEecCCCHHHHHH----h---cCCccEE
Q 018067          183 PGMHVGVVGL-GGLGHVAVKFAKAMGVKVTVISTSPSKKSEAIERLGAD---SFLVSRDQDEMQA----A---MGTMDGI  251 (361)
Q Consensus       183 ~g~~vlV~Ga-g~vG~~a~~la~~~g~~vi~~~~~~~~~~~~~~~~g~~---~vv~~~~~~~~~~----~---~~g~d~v  251 (361)
                      ++++++|.|+ |++|..+++.+...|++|++++++.++..++.+..+.+   ...|..+.+.+.+    +   .+.+|++
T Consensus         4 ~~k~vlItGas~gIG~~ia~~l~~~G~~V~~~~r~~~~~~~l~~~~~~~~~~~~~D~~~~~~~~~~~~~~~~~~g~id~l   83 (262)
T TIGR03325         4 KGEVVLVTGGASGLGRAIVDRFVAEGARVAVLDKSAAGLQELEAAHGDAVVGVEGDVRSLDDHKEAVARCVAAFGKIDCL   83 (262)
T ss_pred             CCcEEEEECCCChHHHHHHHHHHHCCCEEEEEeCCHHHHHHHHhhcCCceEEEEeccCCHHHHHHHHHHHHHHhCCCCEE
Confidence            4788999997 99999999999999999999999887766665444432   1224444433222    2   2478999


Q ss_pred             EEcCCC
Q 018067          252 IDTVSA  257 (361)
Q Consensus       252 id~~g~  257 (361)
                      |+++|.
T Consensus        84 i~~Ag~   89 (262)
T TIGR03325        84 IPNAGI   89 (262)
T ss_pred             EECCCC
Confidence            999873

Members of this family occur as the BphD protein of biphenyl catabolism and as the TodD protein of toluene catabolism. Members catalyze the second step in each pathway and proved interchangeable when tested; the first and fourth enzymes in each pathway confer metabolic specificity. In the context of biphenyl degradation, the enzyme acts as cis-2,3-dihydrobiphenyl-2,3-diol dehydrogenase (EC 1.3.1.56), while in toluene degradation it acts as cis-toluene dihydrodiol dehydrogenase.

>PRK06128 oxidoreductase; Provisional

Probab=96.73  E-value=0.026  Score=51.51  Aligned_cols=98  Identities=13%  Similarity=0.174  Sum_probs=63.3

Q ss_pred             CCCEEEEEcC-ChHHHHHHHHHHHcCCeEEEEeCCchh--HH---HHHHHcCCCE---EecCCCHHHHHHh-------cC
Q 018067          183 PGMHVGVVGL-GGLGHVAVKFAKAMGVKVTVISTSPSK--KS---EAIERLGADS---FLVSRDQDEMQAA-------MG  246 (361)
Q Consensus       183 ~g~~vlV~Ga-g~vG~~a~~la~~~g~~vi~~~~~~~~--~~---~~~~~~g~~~---vv~~~~~~~~~~~-------~~  246 (361)
                      .++++||.|+ |++|..++..+...|++|+++.+..+.  ..   ...+..|...   ..|..+.+.+.++       .+
T Consensus        54 ~~k~vlITGas~gIG~~~a~~l~~~G~~V~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~~Dl~~~~~v~~~~~~~~~~~g  133 (300)
T PRK06128         54 QGRKALITGADSGIGRATAIAFAREGADIALNYLPEEEQDAAEVVQLIQAEGRKAVALPGDLKDEAFCRQLVERAVKELG  133 (300)
T ss_pred             CCCEEEEecCCCcHHHHHHHHHHHcCCEEEEEeCCcchHHHHHHHHHHHHcCCeEEEEecCCCCHHHHHHHHHHHHHHhC
Confidence            4688999997 999999999999999999887654321  12   2223344332   1244554433322       24


Q ss_pred             CccEEEEcCCCcc--------------------------cHHHHHhccccCCEEEEecCC
Q 018067          247 TMDGIIDTVSAVH--------------------------PLMPLIGLLKSQGKLVLVGAP  280 (361)
Q Consensus       247 g~d~vid~~g~~~--------------------------~~~~~~~~l~~~G~~v~~g~~  280 (361)
                      ++|++|+++|...                          .++.++..++++|+++.++..
T Consensus       134 ~iD~lV~nAg~~~~~~~~~~~~~~~~~~~~~~N~~g~~~l~~~~~~~~~~~~~iv~~sS~  193 (300)
T PRK06128        134 GLDILVNIAGKQTAVKDIADITTEQFDATFKTNVYAMFWLCKAAIPHLPPGASIINTGSI  193 (300)
T ss_pred             CCCEEEECCcccCCCCChhhCCHHHHHHHHHHHhHHHHHHHHHHHHhcCcCCEEEEECCc
Confidence            7999999998421                          123344455678899998764

>PRK07424 bifunctional sterol desaturase/short chain dehydrogenase; Validated

Probab=96.73  E-value=0.012  Score=56.00  Aligned_cols=75  Identities=20%  Similarity=0.257  Sum_probs=55.0

Q ss_pred             CCCEEEEEcC-ChHHHHHHHHHHHcCCeEEEEeCCchhHHHHHHHcC--CC-EEecCCCHHHHHHhcCCccEEEEcCCC
Q 018067          183 PGMHVGVVGL-GGLGHVAVKFAKAMGVKVTVISTSPSKKSEAIERLG--AD-SFLVSRDQDEMQAAMGTMDGIIDTVSA  257 (361)
Q Consensus       183 ~g~~vlV~Ga-g~vG~~a~~la~~~g~~vi~~~~~~~~~~~~~~~~g--~~-~vv~~~~~~~~~~~~~g~d~vid~~g~  257 (361)
                      .|++++|.|+ |++|.+.+..+...|++|+++++++++........+  .. ...|..+++.+.+..+++|++|+++|.
T Consensus       177 ~gK~VLITGASgGIG~aLA~~La~~G~~Vi~l~r~~~~l~~~~~~~~~~v~~v~~Dvsd~~~v~~~l~~IDiLInnAGi  255 (406)
T PRK07424        177 KGKTVAVTGASGTLGQALLKELHQQGAKVVALTSNSDKITLEINGEDLPVKTLHWQVGQEAALAELLEKVDILIINHGI  255 (406)
T ss_pred             CCCEEEEeCCCCHHHHHHHHHHHHCCCEEEEEeCCHHHHHHHHhhcCCCeEEEEeeCCCHHHHHHHhCCCCEEEECCCc
Confidence            4789999998 999999999998899999999887765433322212  11 123556666666666789999998874

>PRK06180 short chain dehydrogenase; Provisional

Probab=96.73  E-value=0.011  Score=53.23  Aligned_cols=75  Identities=19%  Similarity=0.242  Sum_probs=54.6

Q ss_pred             CCCEEEEEcC-ChHHHHHHHHHHHcCCeEEEEeCCchhHHHHHHHcCCCE---EecCCCHHHHHHhc-------CCccEE
Q 018067          183 PGMHVGVVGL-GGLGHVAVKFAKAMGVKVTVISTSPSKKSEAIERLGADS---FLVSRDQDEMQAAM-------GTMDGI  251 (361)
Q Consensus       183 ~g~~vlV~Ga-g~vG~~a~~la~~~g~~vi~~~~~~~~~~~~~~~~g~~~---vv~~~~~~~~~~~~-------~g~d~v  251 (361)
                      .++++||.|+ |.+|...++.+...|++|++++++.++...+.+..+...   ..|..+++.+..+.       +++|++
T Consensus         3 ~~~~vlVtGasggiG~~la~~l~~~G~~V~~~~r~~~~~~~l~~~~~~~~~~~~~D~~d~~~~~~~~~~~~~~~~~~d~v   82 (277)
T PRK06180          3 SMKTWLITGVSSGFGRALAQAALAAGHRVVGTVRSEAARADFEALHPDRALARLLDVTDFDAIDAVVADAEATFGPIDVL   82 (277)
T ss_pred             CCCEEEEecCCChHHHHHHHHHHhCcCEEEEEeCCHHHHHHHHhhcCCCeeEEEccCCCHHHHHHHHHHHHHHhCCCCEE
Confidence            3578999997 999999999999999999999998877666644433221   23555554433321       368999


Q ss_pred             EEcCCC
Q 018067          252 IDTVSA  257 (361)
Q Consensus       252 id~~g~  257 (361)
                      |+++|.
T Consensus        83 v~~ag~   88 (277)
T PRK06180         83 VNNAGY   88 (277)
T ss_pred             EECCCc
Confidence            999986

>PRK06196 oxidoreductase; Provisional

Probab=96.72  E-value=0.011  Score=54.51  Aligned_cols=75  Identities=23%  Similarity=0.295  Sum_probs=54.4

Q ss_pred             CCCEEEEEcC-ChHHHHHHHHHHHcCCeEEEEeCCchhHHHHHHHcC-CC-EEecCCCHHHHHHh-------cCCccEEE
Q 018067          183 PGMHVGVVGL-GGLGHVAVKFAKAMGVKVTVISTSPSKKSEAIERLG-AD-SFLVSRDQDEMQAA-------MGTMDGII  252 (361)
Q Consensus       183 ~g~~vlV~Ga-g~vG~~a~~la~~~g~~vi~~~~~~~~~~~~~~~~g-~~-~vv~~~~~~~~~~~-------~~g~d~vi  252 (361)
                      .+.+++|.|+ |++|..++..+...|++|++++++.++...+.+++. .. ...|..+.+.++.+       .+++|++|
T Consensus        25 ~~k~vlITGasggIG~~~a~~L~~~G~~Vv~~~R~~~~~~~~~~~l~~v~~~~~Dl~d~~~v~~~~~~~~~~~~~iD~li  104 (315)
T PRK06196         25 SGKTAIVTGGYSGLGLETTRALAQAGAHVIVPARRPDVAREALAGIDGVEVVMLDLADLESVRAFAERFLDSGRRIDILI  104 (315)
T ss_pred             CCCEEEEeCCCchHHHHHHHHHHHCCCEEEEEeCCHHHHHHHHHHhhhCeEEEccCCCHHHHHHHHHHHHhcCCCCCEEE
Confidence            4678999998 999999999999999999999998877665544443 22 12355555443332       14799999


Q ss_pred             EcCCC
Q 018067          253 DTVSA  257 (361)
Q Consensus       253 d~~g~  257 (361)
                      +++|.
T Consensus       105 ~nAg~  109 (315)
T PRK06196        105 NNAGV  109 (315)
T ss_pred             ECCCC
Confidence            99984

>PRK06141 ornithine cyclodeaminase; Validated

Probab=96.72  E-value=0.034  Score=51.18  Aligned_cols=103  Identities=26%  Similarity=0.227  Sum_probs=67.9

Q ss_pred             CCCCEEEEEcCChHHHHHHHHHHH-cCC-eEEEEeCCchhHHHHHHHcCCC--EEecCCCHHHHHHhcCCccEEEEcCCC
Q 018067          182 KPGMHVGVVGLGGLGHVAVKFAKA-MGV-KVTVISTSPSKKSEAIERLGAD--SFLVSRDQDEMQAAMGTMDGIIDTVSA  257 (361)
Q Consensus       182 ~~g~~vlV~Gag~vG~~a~~la~~-~g~-~vi~~~~~~~~~~~~~~~~g~~--~vv~~~~~~~~~~~~~g~d~vid~~g~  257 (361)
                      +...+++|+|+|..|...+..+.. .+. +|++..++.++...+++++...  .+....+   ..+...++|+|+.+.+.
T Consensus       123 ~~~~~v~iiG~G~~a~~~~~al~~~~~~~~V~V~~Rs~~~a~~~a~~~~~~g~~~~~~~~---~~~av~~aDIVi~aT~s  199 (314)
T PRK06141        123 KDASRLLVVGTGRLASLLALAHASVRPIKQVRVWGRDPAKAEALAAELRAQGFDAEVVTD---LEAAVRQADIISCATLS  199 (314)
T ss_pred             CCCceEEEECCcHHHHHHHHHHHhcCCCCEEEEEcCCHHHHHHHHHHHHhcCCceEEeCC---HHHHHhcCCEEEEeeCC
Confidence            567889999999999999865544 564 8999999988888887776321  1111222   23334579999998887


Q ss_pred             cccHHHHHhccccCCEEEEecCCCC-CcccCh
Q 018067          258 VHPLMPLIGLLKSQGKLVLVGAPEK-PLELPA  288 (361)
Q Consensus       258 ~~~~~~~~~~l~~~G~~v~~g~~~~-~~~~~~  288 (361)
                      ...+- -.+.++++-.+..+|.... .-+++.
T Consensus       200 ~~pvl-~~~~l~~g~~i~~ig~~~~~~~El~~  230 (314)
T PRK06141        200 TEPLV-RGEWLKPGTHLDLVGNFTPDMRECDD  230 (314)
T ss_pred             CCCEe-cHHHcCCCCEEEeeCCCCcccccCCH
Confidence            64221 2256788877777776433 234443

>PRK14189 bifunctional 5,10-methylene-tetrahydrofolate dehydrogenase/ 5,10-methylene-tetrahydrofolate cyclohydrolase; Provisional

Probab=96.72  E-value=0.014  Score=52.44  Aligned_cols=96  Identities=20%  Similarity=0.248  Sum_probs=73.5

Q ss_pred             cccchhhhhhhhHhhhcCCCCCCCEEEEEcC-ChHHHHHHHHHHHcCCeEEEEeCCchhHHHHHHHcCCCEEecCCCHHH
Q 018067          162 APLLCAGITVYSPLRFYGLDKPGMHVGVVGL-GGLGHVAVKFAKAMGVKVTVISTSPSKKSEAIERLGADSFLVSRDQDE  240 (361)
Q Consensus       162 a~l~~~~~ta~~~l~~~~~~~~g~~vlV~Ga-g~vG~~a~~la~~~g~~vi~~~~~~~~~~~~~~~~g~~~vv~~~~~~~  240 (361)
                      ...||+..+....+++..---.|++|+|+|. +.+|.-.+.++...|++|++..+....                     
T Consensus       136 ~~~PcTp~aii~lL~~~~i~l~Gk~vvViGrs~iVGkPla~lL~~~~atVt~~hs~t~~---------------------  194 (285)
T PRK14189        136 LFRPCTPYGVMKMLESIGIPLRGAHAVVIGRSNIVGKPMAMLLLQAGATVTICHSKTRD---------------------  194 (285)
T ss_pred             CCcCCCHHHHHHHHHHcCCCCCCCEEEEECCCCccHHHHHHHHHHCCCEEEEecCCCCC---------------------
Confidence            3567777777777877764458999999998 556999999999999999876443221                     


Q ss_pred             HHHhcCCccEEEEcCCCcccHHHHHhccccCCEEEEecCC
Q 018067          241 MQAAMGTMDGIIDTVSAVHPLMPLIGLLKSQGKLVLVGAP  280 (361)
Q Consensus       241 ~~~~~~g~d~vid~~g~~~~~~~~~~~l~~~G~~v~~g~~  280 (361)
                      +.+....+|+|+-++|.+..+.  .+.++++..++.+|..
T Consensus       195 l~~~~~~ADIVV~avG~~~~i~--~~~ik~gavVIDVGin  232 (285)
T PRK14189        195 LAAHTRQADIVVAAVGKRNVLT--ADMVKPGATVIDVGMN  232 (285)
T ss_pred             HHHHhhhCCEEEEcCCCcCccC--HHHcCCCCEEEEcccc
Confidence            2334456899999999987443  3889999999999964

>PRK14027 quinate/shikimate dehydrogenase; Provisional

Probab=96.71  E-value=0.014  Score=52.84  Aligned_cols=75  Identities=19%  Similarity=0.321  Sum_probs=52.6

Q ss_pred             CCCCEEEEEcCChHHHHHHHHHHHcCC-eEEEEeCCchhHHHHHHHcCC----CEEecCCCHHHHHHhcCCccEEEEcCC
Q 018067          182 KPGMHVGVVGLGGLGHVAVKFAKAMGV-KVTVISTSPSKKSEAIERLGA----DSFLVSRDQDEMQAAMGTMDGIIDTVS  256 (361)
Q Consensus       182 ~~g~~vlV~Gag~vG~~a~~la~~~g~-~vi~~~~~~~~~~~~~~~~g~----~~vv~~~~~~~~~~~~~g~d~vid~~g  256 (361)
                      ..+++++|+|+|+.+.+++..+...|+ +++++.++.++.+.+++++..    ..+. ..+..........+|+|+|++.
T Consensus       125 ~~~k~vlilGaGGaarAi~~aL~~~g~~~i~i~nR~~~ka~~La~~~~~~~~~~~~~-~~~~~~~~~~~~~~divINaTp  203 (283)
T PRK14027        125 AKLDSVVQVGAGGVGNAVAYALVTHGVQKLQVADLDTSRAQALADVINNAVGREAVV-GVDARGIEDVIAAADGVVNATP  203 (283)
T ss_pred             cCCCeEEEECCcHHHHHHHHHHHHCCCCEEEEEcCCHHHHHHHHHHHhhccCcceEE-ecCHhHHHHHHhhcCEEEEcCC
Confidence            457899999999999999999988998 788999998888888766531    1111 1111111222246899999875


Q ss_pred             C
Q 018067          257 A  257 (361)
Q Consensus       257 ~  257 (361)
                      -
T Consensus       204 ~  204 (283)
T PRK14027        204 M  204 (283)
T ss_pred             C
Confidence            3

>PRK10792 bifunctional 5,10-methylene-tetrahydrofolate dehydrogenase/ 5,10-methylene-tetrahydrofolate cyclohydrolase; Provisional

Probab=96.71  E-value=0.016  Score=51.91  Aligned_cols=95  Identities=20%  Similarity=0.197  Sum_probs=73.9

Q ss_pred             ccchhhhhhhhHhhhcCCCCCCCEEEEEcC-ChHHHHHHHHHHHcCCeEEEEeCCchhHHHHHHHcCCCEEecCCCHHHH
Q 018067          163 PLLCAGITVYSPLRFYGLDKPGMHVGVVGL-GGLGHVAVKFAKAMGVKVTVISTSPSKKSEAIERLGADSFLVSRDQDEM  241 (361)
Q Consensus       163 ~l~~~~~ta~~~l~~~~~~~~g~~vlV~Ga-g~vG~~a~~la~~~g~~vi~~~~~~~~~~~~~~~~g~~~vv~~~~~~~~  241 (361)
                      ..||+..+.+..++...---.|++|+|+|- ..+|.-.+.++...|++|++..+....                     +
T Consensus       138 ~~PcTp~av~~ll~~~~i~l~Gk~vvViGrs~iVG~Pla~lL~~~~atVtv~hs~T~~---------------------l  196 (285)
T PRK10792        138 LRPCTPRGIMTLLERYGIDTYGLNAVVVGASNIVGRPMSLELLLAGCTVTVCHRFTKN---------------------L  196 (285)
T ss_pred             CCCCCHHHHHHHHHHcCCCCCCCEEEEECCCcccHHHHHHHHHHCCCeEEEEECCCCC---------------------H
Confidence            457777777888877664357999999997 559999999999999999888664322                     2


Q ss_pred             HHhcCCccEEEEcCCCcccHHHHHhccccCCEEEEecCC
Q 018067          242 QAAMGTMDGIIDTVSAVHPLMPLIGLLKSQGKLVLVGAP  280 (361)
Q Consensus       242 ~~~~~g~d~vid~~g~~~~~~~~~~~l~~~G~~v~~g~~  280 (361)
                      ++....+|++|.++|.+..+.  -+.++++..++.+|..
T Consensus       197 ~~~~~~ADIvi~avG~p~~v~--~~~vk~gavVIDvGin  233 (285)
T PRK10792        197 RHHVRNADLLVVAVGKPGFIP--GEWIKPGAIVIDVGIN  233 (285)
T ss_pred             HHHHhhCCEEEEcCCCccccc--HHHcCCCcEEEEcccc
Confidence            334456899999999988433  3788999999999954

>PRK12749 quinate/shikimate dehydrogenase; Reviewed

Probab=96.71  E-value=0.016  Score=52.54  Aligned_cols=76  Identities=14%  Similarity=0.225  Sum_probs=50.5

Q ss_pred             CCCCEEEEEcCChHHHHHHHHHHHcCC-eEEEEeCCc---hhHHHHHHHcCCC-----EEecCCCHHHHHHhcCCccEEE
Q 018067          182 KPGMHVGVVGLGGLGHVAVKFAKAMGV-KVTVISTSP---SKKSEAIERLGAD-----SFLVSRDQDEMQAAMGTMDGII  252 (361)
Q Consensus       182 ~~g~~vlV~Gag~vG~~a~~la~~~g~-~vi~~~~~~---~~~~~~~~~~g~~-----~vv~~~~~~~~~~~~~g~d~vi  252 (361)
                      -++++++|+|+|+.+.+++..+...|+ +++++.|+.   ++.+.++++++..     .+....+.+.+......+|+||
T Consensus       122 ~~~k~vlvlGaGGaarAi~~~l~~~g~~~i~i~nRt~~~~~ka~~la~~~~~~~~~~~~~~~~~~~~~l~~~~~~aDivI  201 (288)
T PRK12749        122 IKGKTMVLLGAGGASTAIGAQGAIEGLKEIKLFNRRDEFFDKALAFAQRVNENTDCVVTVTDLADQQAFAEALASADILT  201 (288)
T ss_pred             cCCCEEEEECCcHHHHHHHHHHHHCCCCEEEEEeCCccHHHHHHHHHHHhhhccCceEEEechhhhhhhhhhcccCCEEE
Confidence            367899999999999988887777887 888998884   3666666666421     1222211111223335799999


Q ss_pred             EcCCC
Q 018067          253 DTVSA  257 (361)
Q Consensus       253 d~~g~  257 (361)
                      +++.-
T Consensus       202 NaTp~  206 (288)
T PRK12749        202 NGTKV  206 (288)
T ss_pred             ECCCC
Confidence            98753

>PRK07062 short chain dehydrogenase; Provisional

Probab=96.70  E-value=0.011  Score=52.68  Aligned_cols=75  Identities=21%  Similarity=0.295  Sum_probs=53.6

Q ss_pred             CCCEEEEEcC-ChHHHHHHHHHHHcCCeEEEEeCCchhHHHHHHHc----C-CC---EEecCCCHHHHHHh-------cC
Q 018067          183 PGMHVGVVGL-GGLGHVAVKFAKAMGVKVTVISTSPSKKSEAIERL----G-AD---SFLVSRDQDEMQAA-------MG  246 (361)
Q Consensus       183 ~g~~vlV~Ga-g~vG~~a~~la~~~g~~vi~~~~~~~~~~~~~~~~----g-~~---~vv~~~~~~~~~~~-------~~  246 (361)
                      .|++++|.|+ +++|...++.+...|++|++++++.++.....+++    + ..   ...|..+.+.+.++       .+
T Consensus         7 ~~k~~lItGas~giG~~ia~~l~~~G~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~~D~~~~~~v~~~~~~~~~~~g   86 (265)
T PRK07062          7 EGRVAVVTGGSSGIGLATVELLLEAGASVAICGRDEERLASAEARLREKFPGARLLAARCDVLDEADVAAFAAAVEARFG   86 (265)
T ss_pred             CCCEEEEeCCCchHHHHHHHHHHHCCCeEEEEeCCHHHHHHHHHHHHhhCCCceEEEEEecCCCHHHHHHHHHHHHHhcC
Confidence            5788999998 99999999999999999999999877655543332    1 11   12355555443322       24


Q ss_pred             CccEEEEcCCC
Q 018067          247 TMDGIIDTVSA  257 (361)
Q Consensus       247 g~d~vid~~g~  257 (361)
                      ++|++|+++|.
T Consensus        87 ~id~li~~Ag~   97 (265)
T PRK07062         87 GVDMLVNNAGQ   97 (265)
T ss_pred             CCCEEEECCCC
Confidence            79999999984

>cd05212 NAD_bind_m-THF_DH_Cyclohyd_like NAD(P) binding domain of methylene-tetrahydrofolate dehydrogenase and methylene-tetrahydrofolate dehydrogenase/cyclohydrolase

Probab=96.69  E-value=0.031  Score=44.76  Aligned_cols=97  Identities=15%  Similarity=0.079  Sum_probs=72.9

Q ss_pred             cccchhhhhhhhHhhhcCCCCCCCEEEEEcC-ChHHHHHHHHHHHcCCeEEEEeCCchhHHHHHHHcCCCEEecCCCHHH
Q 018067          162 APLLCAGITVYSPLRFYGLDKPGMHVGVVGL-GGLGHVAVKFAKAMGVKVTVISTSPSKKSEAIERLGADSFLVSRDQDE  240 (361)
Q Consensus       162 a~l~~~~~ta~~~l~~~~~~~~g~~vlV~Ga-g~vG~~a~~la~~~g~~vi~~~~~~~~~~~~~~~~g~~~vv~~~~~~~  240 (361)
                      ..++|........+++...--.|++|+|+|. ..+|.-++.++...|++|+.+.+.....                    
T Consensus         6 ~~~p~t~~a~~~ll~~~~~~~~gk~v~VvGrs~~vG~pla~lL~~~gatV~~~~~~t~~l--------------------   65 (140)
T cd05212           6 LFVSPVAKAVKELLNKEGVRLDGKKVLVVGRSGIVGAPLQCLLQRDGATVYSCDWKTIQL--------------------   65 (140)
T ss_pred             cccccHHHHHHHHHHHcCCCCCCCEEEEECCCchHHHHHHHHHHHCCCEEEEeCCCCcCH--------------------
Confidence            3566666677777777664458999999997 8899999999999999998887543222                    


Q ss_pred             HHHhcCCccEEEEcCCCcccHHHHHhccccCCEEEEecCCC
Q 018067          241 MQAAMGTMDGIIDTVSAVHPLMPLIGLLKSQGKLVLVGAPE  281 (361)
Q Consensus       241 ~~~~~~g~d~vid~~g~~~~~~~~~~~l~~~G~~v~~g~~~  281 (361)
                       ++....+|+++-++|....+  --+.+++|-.++.+|...
T Consensus        66 -~~~v~~ADIVvsAtg~~~~i--~~~~ikpGa~Vidvg~~~  103 (140)
T cd05212          66 -QSKVHDADVVVVGSPKPEKV--PTEWIKPGATVINCSPTK  103 (140)
T ss_pred             -HHHHhhCCEEEEecCCCCcc--CHHHcCCCCEEEEcCCCc
Confidence             22334589999999987633  356799999999888643

NAD(P) binding domains of methylene-tetrahydrofolate dehydrogenase (m-THF DH) and m-THF DH/cyclohydrolase bifunctional enzymes (m-THF DH/cyclohydrolase). M-THF is a versatile carrier of activated one-carbon units. The major one-carbon folate donors are N-5 methyltetrahydrofolate, N5,N10-m-THF, and N10-formayltetrahydrofolate. The oxidation of metabolic intermediate m-THF to m-THF requires the enzyme m-THF DH. In addition, most DHs also have an associated cyclohydrolase activity which catalyzes its hydrolysis to N10-formyltetrahydrofolate. m-THF DH is typically found as part of a multifunctional protein in eukaryotes. NADP-dependent m-THF DH in mammals, birds and yeast are components of a trifunctional enzyme with DH, cyclohydrolase, and synthetase activities. Certain eukaryotic cells also contain homodimeric bifunctional

>PRK07831 short chain dehydrogenase; Provisional

Probab=96.69  E-value=0.017  Score=51.53  Aligned_cols=77  Identities=19%  Similarity=0.318  Sum_probs=54.1

Q ss_pred             CCCCCEEEEEcC-C-hHHHHHHHHHHHcCCeEEEEeCCchhHHHHHHH----cCCCEE----ecCCCHHHHHHh------
Q 018067          181 DKPGMHVGVVGL-G-GLGHVAVKFAKAMGVKVTVISTSPSKKSEAIER----LGADSF----LVSRDQDEMQAA------  244 (361)
Q Consensus       181 ~~~g~~vlV~Ga-g-~vG~~a~~la~~~g~~vi~~~~~~~~~~~~~~~----~g~~~v----v~~~~~~~~~~~------  244 (361)
                      +.++++++|.|+ | ++|.++++.+...|++|++++++.++.+...++    ++...+    .|..+++.+..+      
T Consensus        14 ~~~~k~vlItG~sg~gIG~~ia~~l~~~G~~V~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~Dl~~~~~~~~~~~~~~~   93 (262)
T PRK07831         14 LLAGKVVLVTAAAGTGIGSATARRALEEGARVVISDIHERRLGETADELAAELGLGRVEAVVCDVTSEAQVDALIDAAVE   93 (262)
T ss_pred             ccCCCEEEEECCCcccHHHHHHHHHHHcCCEEEEEeCCHHHHHHHHHHHHHhcCCceEEEEEccCCCHHHHHHHHHHHHH
Confidence            356789999997 6 799999999999999999988877665444332    343222    255555433322      


Q ss_pred             -cCCccEEEEcCCC
Q 018067          245 -MGTMDGIIDTVSA  257 (361)
Q Consensus       245 -~~g~d~vid~~g~  257 (361)
                       .+++|++|+++|.
T Consensus        94 ~~g~id~li~~ag~  107 (262)
T PRK07831         94 RLGRLDVLVNNAGL  107 (262)
T ss_pred             HcCCCCEEEECCCC
Confidence             2478999999984

>PRK13943 protein-L-isoaspartate O-methyltransferase; Provisional

Probab=96.69  E-value=0.022  Score=52.48  Aligned_cols=97  Identities=23%  Similarity=0.229  Sum_probs=66.4

Q ss_pred             CCCCCCCEEEEEcCChHHHHHHHHHHHcCC--eEEEEeCCchhHHHH---HHHcCCCEEecCCCHHHHHHh--cCCccEE
Q 018067          179 GLDKPGMHVGVVGLGGLGHVAVKFAKAMGV--KVTVISTSPSKKSEA---IERLGADSFLVSRDQDEMQAA--MGTMDGI  251 (361)
Q Consensus       179 ~~~~~g~~vlV~Gag~vG~~a~~la~~~g~--~vi~~~~~~~~~~~~---~~~~g~~~vv~~~~~~~~~~~--~~g~d~v  251 (361)
                      ..++++++||.+|+| .|..++.+++..+.  +|+.++.+++....+   +++.|.+.+..... +.....  ...+|+|
T Consensus        76 L~i~~g~~VLDIG~G-tG~~a~~LA~~~~~~g~VvgVDis~~~l~~Ar~~l~~~g~~nV~~i~g-D~~~~~~~~~~fD~I  153 (322)
T PRK13943         76 VGLDKGMRVLEIGGG-TGYNAAVMSRVVGEKGLVVSVEYSRKICEIAKRNVRRLGIENVIFVCG-DGYYGVPEFAPYDVI  153 (322)
T ss_pred             cCCCCCCEEEEEeCC-ccHHHHHHHHhcCCCCEEEEEECCHHHHHHHHHHHHHcCCCcEEEEeC-ChhhcccccCCccEE
Confidence            346899999999998 59999999998764  688888887654333   23456543222111 111111  1369999


Q ss_pred             EEcCCCcccHHHHHhccccCCEEEEe
Q 018067          252 IDTVSAVHPLMPLIGLLKSQGKLVLV  277 (361)
Q Consensus       252 id~~g~~~~~~~~~~~l~~~G~~v~~  277 (361)
                      +.+.+.........+.|+++|+++..
T Consensus       154 i~~~g~~~ip~~~~~~LkpgG~Lvv~  179 (322)
T PRK13943        154 FVTVGVDEVPETWFTQLKEGGRVIVP  179 (322)
T ss_pred             EECCchHHhHHHHHHhcCCCCEEEEE
Confidence            99888766566788999999998773

>PRK05867 short chain dehydrogenase; Provisional

Probab=96.68  E-value=0.0097  Score=52.77  Aligned_cols=75  Identities=12%  Similarity=0.211  Sum_probs=54.7

Q ss_pred             CCCEEEEEcC-ChHHHHHHHHHHHcCCeEEEEeCCchhHHHHHHHc---CCC---EEecCCCHHHHHHh-------cCCc
Q 018067          183 PGMHVGVVGL-GGLGHVAVKFAKAMGVKVTVISTSPSKKSEAIERL---GAD---SFLVSRDQDEMQAA-------MGTM  248 (361)
Q Consensus       183 ~g~~vlV~Ga-g~vG~~a~~la~~~g~~vi~~~~~~~~~~~~~~~~---g~~---~vv~~~~~~~~~~~-------~~g~  248 (361)
                      .++++||.|+ |++|..+++.+...|++|++++++.++.+.+.+++   +.+   ...|..+++.+.++       .+++
T Consensus         8 ~~k~vlVtGas~gIG~~ia~~l~~~G~~V~~~~r~~~~~~~~~~~l~~~~~~~~~~~~D~~~~~~~~~~~~~~~~~~g~i   87 (253)
T PRK05867          8 HGKRALITGASTGIGKRVALAYVEAGAQVAIAARHLDALEKLADEIGTSGGKVVPVCCDVSQHQQVTSMLDQVTAELGGI   87 (253)
T ss_pred             CCCEEEEECCCchHHHHHHHHHHHCCCEEEEEcCCHHHHHHHHHHHHhcCCeEEEEEccCCCHHHHHHHHHHHHHHhCCC
Confidence            4788999998 99999999999999999999999887766655443   322   12345555433332       2479


Q ss_pred             cEEEEcCCC
Q 018067          249 DGIIDTVSA  257 (361)
Q Consensus       249 d~vid~~g~  257 (361)
                      |++|+++|.
T Consensus        88 d~lv~~ag~   96 (253)
T PRK05867         88 DIAVCNAGI   96 (253)
T ss_pred             CEEEECCCC
Confidence            999999874

>PRK07576 short chain dehydrogenase; Provisional

Probab=96.67  E-value=0.0081  Score=53.76  Aligned_cols=76  Identities=28%  Similarity=0.353  Sum_probs=53.3

Q ss_pred             CCCCEEEEEcC-ChHHHHHHHHHHHcCCeEEEEeCCchhHHHHHHHc---CCCE---EecCCCHHHHHHh-------cCC
Q 018067          182 KPGMHVGVVGL-GGLGHVAVKFAKAMGVKVTVISTSPSKKSEAIERL---GADS---FLVSRDQDEMQAA-------MGT  247 (361)
Q Consensus       182 ~~g~~vlV~Ga-g~vG~~a~~la~~~g~~vi~~~~~~~~~~~~~~~~---g~~~---vv~~~~~~~~~~~-------~~g  247 (361)
                      .+++++||.|+ |.+|...++.+...|++|++++++.++.....+++   +...   .+|..+++.+..+       .++
T Consensus         7 ~~~k~ilItGasggIG~~la~~l~~~G~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~Dv~~~~~i~~~~~~~~~~~~~   86 (264)
T PRK07576          7 FAGKNVVVVGGTSGINLGIAQAFARAGANVAVASRSQEKVDAAVAQLQQAGPEGLGVSADVRDYAAVEAAFAQIADEFGP   86 (264)
T ss_pred             CCCCEEEEECCCchHHHHHHHHHHHCCCEEEEEeCCHHHHHHHHHHHHHhCCceEEEECCCCCHHHHHHHHHHHHHHcCC
Confidence            35789999998 99999999999999999999998876654443333   2221   2355555443332       246


Q ss_pred             ccEEEEcCCC
Q 018067          248 MDGIIDTVSA  257 (361)
Q Consensus       248 ~d~vid~~g~  257 (361)
                      +|++|.++|.
T Consensus        87 iD~vi~~ag~   96 (264)
T PRK07576         87 IDVLVSGAAG   96 (264)
T ss_pred             CCEEEECCCC
Confidence            8999998863

>PF02882 THF_DHG_CYH_C: Tetrahydrofolate dehydrogenase/cyclohydrolase, NAD(P)-binding domain; InterPro: IPR020631 Enzymes that participate in the transfer of one-carbon units require the coenzyme tetrahydrofolate (THF)

Probab=96.67  E-value=0.017  Score=47.39  Aligned_cols=119  Identities=18%  Similarity=0.219  Sum_probs=73.5

Q ss_pred             ccccchhhhhhhhHhhhcCCCCCCCEEEEEcC-ChHHHHHHHHHHHcCCeEEEEeCCchhHHHHHHHcCCCEEecCCCHH
Q 018067          161 TAPLLCAGITVYSPLRFYGLDKPGMHVGVVGL-GGLGHVAVKFAKAMGVKVTVISTSPSKKSEAIERLGADSFLVSRDQD  239 (361)
Q Consensus       161 aa~l~~~~~ta~~~l~~~~~~~~g~~vlV~Ga-g~vG~~a~~la~~~g~~vi~~~~~~~~~~~~~~~~g~~~vv~~~~~~  239 (361)
                      ...+||+..+.+..++...---.|++|+|+|. ..+|.-.+.++...|+.|....+..+...                  
T Consensus        13 ~~~~PcTp~aii~lL~~~~~~l~Gk~v~VvGrs~~VG~Pla~lL~~~~atVt~~h~~T~~l~------------------   74 (160)
T PF02882_consen   13 PGFVPCTPLAIIELLEYYGIDLEGKKVVVVGRSNIVGKPLAMLLLNKGATVTICHSKTKNLQ------------------   74 (160)
T ss_dssp             TSS--HHHHHHHHHHHHTT-STTT-EEEEE-TTTTTHHHHHHHHHHTT-EEEEE-TTSSSHH------------------
T ss_pred             CCCcCCCHHHHHHHHHhcCCCCCCCEEEEECCcCCCChHHHHHHHhCCCeEEeccCCCCccc------------------
Confidence            35677877888888887765568999999997 68999999999999999988766543332                  


Q ss_pred             HHHHhcCCccEEEEcCCCcccHHHHHhccccCCEEEEecCCCC----Cc--ccChHHHHhCCcEEEecc
Q 018067          240 EMQAAMGTMDGIIDTVSAVHPLMPLIGLLKSQGKLVLVGAPEK----PL--ELPAFSLLMGRKIVGGSM  302 (361)
Q Consensus       240 ~~~~~~~g~d~vid~~g~~~~~~~~~~~l~~~G~~v~~g~~~~----~~--~~~~~~~~~~~~~i~g~~  302 (361)
                         +....+|+||-++|.+..+  -.+.++++..++++|....    .+  .++...+..+..-+....
T Consensus        75 ---~~~~~ADIVVsa~G~~~~i--~~~~ik~gavVIDvG~~~~~~~~~~~GDv~~~~~~~~a~~itPvP  138 (160)
T PF02882_consen   75 ---EITRRADIVVSAVGKPNLI--KADWIKPGAVVIDVGINYVPGDGKLVGDVDFESVKEKASAITPVP  138 (160)
T ss_dssp             ---HHHTTSSEEEE-SSSTT-B---GGGS-TTEEEEE--CEEETTTTEEEESB-HHHHHTTCSEEE-SS
T ss_pred             ---ceeeeccEEeeeecccccc--ccccccCCcEEEecCCccccccceeeecccHHHhhccceEEeeCC
Confidence               2334689999999987733  3567899999999987432    11  234444444444454443

Various reactions generate one-carbon derivatives of THF, which can be interconverted between different oxidation states by methylene-THF dehydrogenase (1.5.1.5 from EC), methenyl-THF cyclohydrolase (3.5.4.9 from EC) and formyl-THF synthetase (6.3.4.3 from EC) [, ]. The dehydrogenase and cyclohydrolase activities are expressed by a variety of multifunctional enzymes, including the tri-functional eukaryotic C1-tetrahydrofolate synthase []; a bifunctional eukaryotic mitochondrial protein; and the bifunctional Escherichia coli folD protein [, ]. Methylene-tetrahydrofolate dehydrogenase and methenyltetrahydrofolate cyclo-hydrolase share an overlapping active site [], and as such are usually located together in proteins, acting in tandem on the carbon-nitrogen bonds of substrates other than peptide bonds. This entry represents the NAD(P)-binding domain found in these enzymes.; GO: 0003824 catalytic activity, 0004488 methylenetetrahydrofolate dehydrogenase (NADP+) activity, 0009396 folic acid-containing compound biosynthetic process, 0055114 oxidation-reduction process; PDB: 1B0A_A 2C2X_B 2C2Y_A 3NGL_C 3NGX_A 4A26_B 1EDZ_A 1EE9_A 3P2O_B 1DIA_A ....

>PRK09291 short chain dehydrogenase; Provisional

Probab=96.67  E-value=0.012  Score=52.11  Aligned_cols=74  Identities=15%  Similarity=0.111  Sum_probs=53.4

Q ss_pred             CCEEEEEcC-ChHHHHHHHHHHHcCCeEEEEeCCchhHHHHHH---HcCCC---EEecCCCHHHHHHhc-CCccEEEEcC
Q 018067          184 GMHVGVVGL-GGLGHVAVKFAKAMGVKVTVISTSPSKKSEAIE---RLGAD---SFLVSRDQDEMQAAM-GTMDGIIDTV  255 (361)
Q Consensus       184 g~~vlV~Ga-g~vG~~a~~la~~~g~~vi~~~~~~~~~~~~~~---~~g~~---~vv~~~~~~~~~~~~-~g~d~vid~~  255 (361)
                      +.++||.|+ |.+|..+++.+...|++|++++++.+....+.+   ..+..   ...|..+++.+.... .++|++|+++
T Consensus         2 ~~~vlVtGasg~iG~~ia~~l~~~G~~v~~~~r~~~~~~~~~~~~~~~~~~~~~~~~D~~~~~~~~~~~~~~id~vi~~a   81 (257)
T PRK09291          2 SKTILITGAGSGFGREVALRLARKGHNVIAGVQIAPQVTALRAEAARRGLALRVEKLDLTDAIDRAQAAEWDVDVLLNNA   81 (257)
T ss_pred             CCEEEEeCCCCHHHHHHHHHHHHCCCEEEEEeCCHHHHHHHHHHHHhcCCcceEEEeeCCCHHHHHHHhcCCCCEEEECC
Confidence            457999998 999999999999999999999988765444422   22322   123555665555543 4899999998


Q ss_pred             CC
Q 018067          256 SA  257 (361)
Q Consensus       256 g~  257 (361)
                      |.
T Consensus        82 g~   83 (257)
T PRK09291         82 GI   83 (257)
T ss_pred             Cc
Confidence            84

>PRK06194 hypothetical protein; Provisional

Probab=96.66  E-value=0.012  Score=53.20  Aligned_cols=75  Identities=19%  Similarity=0.342  Sum_probs=53.2

Q ss_pred             CCCEEEEEcC-ChHHHHHHHHHHHcCCeEEEEeCCchhHHHHHHHc---CCCE---EecCCCHHHHHHhc-------CCc
Q 018067          183 PGMHVGVVGL-GGLGHVAVKFAKAMGVKVTVISTSPSKKSEAIERL---GADS---FLVSRDQDEMQAAM-------GTM  248 (361)
Q Consensus       183 ~g~~vlV~Ga-g~vG~~a~~la~~~g~~vi~~~~~~~~~~~~~~~~---g~~~---vv~~~~~~~~~~~~-------~g~  248 (361)
                      .+.++||.|+ |.+|...+..+...|++|++++++.+...+..+++   +...   ..|..+.+.+.++.       +++
T Consensus         5 ~~k~vlVtGasggIG~~la~~l~~~G~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~D~~d~~~~~~~~~~~~~~~g~i   84 (287)
T PRK06194          5 AGKVAVITGAASGFGLAFARIGAALGMKLVLADVQQDALDRAVAELRAQGAEVLGVRTDVSDAAQVEALADAALERFGAV   84 (287)
T ss_pred             CCCEEEEeCCccHHHHHHHHHHHHCCCEEEEEeCChHHHHHHHHHHHhcCCeEEEEECCCCCHHHHHHHHHHHHHHcCCC
Confidence            3578999997 99999999999999999999998876655554443   3321   22444544443322       368


Q ss_pred             cEEEEcCCC
Q 018067          249 DGIIDTVSA  257 (361)
Q Consensus       249 d~vid~~g~  257 (361)
                      |++|+++|.
T Consensus        85 d~vi~~Ag~   93 (287)
T PRK06194         85 HLLFNNAGV   93 (287)
T ss_pred             CEEEECCCC
Confidence            999999986

>PRK05717 oxidoreductase; Validated

Probab=96.65  E-value=0.014  Score=51.76  Aligned_cols=76  Identities=20%  Similarity=0.302  Sum_probs=54.9

Q ss_pred             CCCCEEEEEcC-ChHHHHHHHHHHHcCCeEEEEeCCchhHHHHHHHcCCC---EEecCCCHHHHHH----h---cCCccE
Q 018067          182 KPGMHVGVVGL-GGLGHVAVKFAKAMGVKVTVISTSPSKKSEAIERLGAD---SFLVSRDQDEMQA----A---MGTMDG  250 (361)
Q Consensus       182 ~~g~~vlV~Ga-g~vG~~a~~la~~~g~~vi~~~~~~~~~~~~~~~~g~~---~vv~~~~~~~~~~----~---~~g~d~  250 (361)
                      ..|++++|.|+ |.+|..++..+...|++|++++++.++...+.++++..   ...|..+.+.+.+    +   .+.+|+
T Consensus         8 ~~~k~vlItG~sg~IG~~~a~~l~~~g~~v~~~~~~~~~~~~~~~~~~~~~~~~~~Dl~~~~~~~~~~~~~~~~~g~id~   87 (255)
T PRK05717          8 HNGRVALVTGAARGIGLGIAAWLIAEGWQVVLADLDRERGSKVAKALGENAWFIAMDVADEAQVAAGVAEVLGQFGRLDA   87 (255)
T ss_pred             cCCCEEEEeCCcchHHHHHHHHHHHcCCEEEEEcCCHHHHHHHHHHcCCceEEEEccCCCHHHHHHHHHHHHHHhCCCCE
Confidence            35788999997 99999999999999999999988876666665555532   1234455443322    2   136899


Q ss_pred             EEEcCCC
Q 018067          251 IIDTVSA  257 (361)
Q Consensus       251 vid~~g~  257 (361)
                      +|.++|.
T Consensus        88 li~~ag~   94 (255)
T PRK05717         88 LVCNAAI   94 (255)
T ss_pred             EEECCCc
Confidence            9999985

>PRK05876 short chain dehydrogenase; Provisional

Probab=96.64  E-value=0.013  Score=52.87  Aligned_cols=75  Identities=20%  Similarity=0.313  Sum_probs=54.1

Q ss_pred             CCCEEEEEcC-ChHHHHHHHHHHHcCCeEEEEeCCchhHHHHHHHc---CCCE---EecCCCHHHHHHh-------cCCc
Q 018067          183 PGMHVGVVGL-GGLGHVAVKFAKAMGVKVTVISTSPSKKSEAIERL---GADS---FLVSRDQDEMQAA-------MGTM  248 (361)
Q Consensus       183 ~g~~vlV~Ga-g~vG~~a~~la~~~g~~vi~~~~~~~~~~~~~~~~---g~~~---vv~~~~~~~~~~~-------~~g~  248 (361)
                      .++++||.|+ |++|..++..+...|++|++++++.++..++.+++   +.+.   ..|-.+.+.+.++       .+++
T Consensus         5 ~~k~vlVTGas~gIG~ala~~La~~G~~Vv~~~r~~~~l~~~~~~l~~~~~~~~~~~~Dv~d~~~v~~~~~~~~~~~g~i   84 (275)
T PRK05876          5 PGRGAVITGGASGIGLATGTEFARRGARVVLGDVDKPGLRQAVNHLRAEGFDVHGVMCDVRHREEVTHLADEAFRLLGHV   84 (275)
T ss_pred             CCCEEEEeCCCchHHHHHHHHHHHCCCEEEEEeCCHHHHHHHHHHHHhcCCeEEEEeCCCCCHHHHHHHHHHHHHHcCCC
Confidence            4788999997 99999999999999999999998877666554443   3321   2344555443332       2468


Q ss_pred             cEEEEcCCC
Q 018067          249 DGIIDTVSA  257 (361)
Q Consensus       249 d~vid~~g~  257 (361)
                      |++|+++|.
T Consensus        85 d~li~nAg~   93 (275)
T PRK05876         85 DVVFSNAGI   93 (275)
T ss_pred             CEEEECCCc
Confidence            999999984

>PRK07502 cyclohexadienyl dehydrogenase; Validated

Probab=96.64  E-value=0.017  Score=52.97  Aligned_cols=91  Identities=19%  Similarity=0.261  Sum_probs=61.1

Q ss_pred             CEEEEEcCChHHHHHHHHHHHcCC--eEEEEeCCchhHHHHHHHcCCCEEecCCCHHHHHHhcCCccEEEEcCCCccc--
Q 018067          185 MHVGVVGLGGLGHVAVKFAKAMGV--KVTVISTSPSKKSEAIERLGADSFLVSRDQDEMQAAMGTMDGIIDTVSAVHP--  260 (361)
Q Consensus       185 ~~vlV~Gag~vG~~a~~la~~~g~--~vi~~~~~~~~~~~~~~~~g~~~vv~~~~~~~~~~~~~g~d~vid~~g~~~~--  260 (361)
                      .+|.|+|+|.+|.+.+..++..|.  +|+++++++++.+.+ ++.|....+.. +   ..+....+|+||.|+.....  
T Consensus         7 ~~I~IIG~G~mG~sla~~l~~~g~~~~V~~~dr~~~~~~~a-~~~g~~~~~~~-~---~~~~~~~aDvViiavp~~~~~~   81 (307)
T PRK07502          7 DRVALIGIGLIGSSLARAIRRLGLAGEIVGADRSAETRARA-RELGLGDRVTT-S---AAEAVKGADLVILCVPVGASGA   81 (307)
T ss_pred             cEEEEEeeCHHHHHHHHHHHhcCCCcEEEEEECCHHHHHHH-HhCCCCceecC-C---HHHHhcCCCEEEECCCHHHHHH
Confidence            579999999999999999988884  888888887766555 56675321111 1   12233578999999986541  


Q ss_pred             -HHHHHhccccCCEEEEecCC
Q 018067          261 -LMPLIGLLKSQGKLVLVGAP  280 (361)
Q Consensus       261 -~~~~~~~l~~~G~~v~~g~~  280 (361)
                       +......++++..++.+|..
T Consensus        82 v~~~l~~~l~~~~iv~dvgs~  102 (307)
T PRK07502         82 VAAEIAPHLKPGAIVTDVGSV  102 (307)
T ss_pred             HHHHHHhhCCCCCEEEeCccc
Confidence             22233455677777777653

>PF01135 PCMT: Protein-L-isoaspartate(D-aspartate) O-methyltransferase (PCMT); InterPro: IPR000682 Protein-L-isoaspartate(D-aspartate) O-methyltransferase (2

Probab=96.63  E-value=0.0071  Score=52.06  Aligned_cols=99  Identities=30%  Similarity=0.328  Sum_probs=62.2

Q ss_pred             cCCCCCCCEEEEEcCChHHHHHHHHHHHcCC--eEEEEeCCchhHHHH---HHHcCCCE-EecCCCHHHHHHhcCCccEE
Q 018067          178 YGLDKPGMHVGVVGLGGLGHVAVKFAKAMGV--KVTVISTSPSKKSEA---IERLGADS-FLVSRDQDEMQAAMGTMDGI  251 (361)
Q Consensus       178 ~~~~~~g~~vlV~Gag~vG~~a~~la~~~g~--~vi~~~~~~~~~~~~---~~~~g~~~-vv~~~~~~~~~~~~~g~d~v  251 (361)
                      ...+++|++||-+|+|. |..++-+++..|.  +|+.+...++-...+   .+.++.+. .+...+...-.....+||.+
T Consensus        67 ~L~l~pg~~VLeIGtGs-GY~aAlla~lvg~~g~Vv~vE~~~~l~~~A~~~l~~~~~~nv~~~~gdg~~g~~~~apfD~I  145 (209)
T PF01135_consen   67 ALDLKPGDRVLEIGTGS-GYQAALLAHLVGPVGRVVSVERDPELAERARRNLARLGIDNVEVVVGDGSEGWPEEAPFDRI  145 (209)
T ss_dssp             HTTC-TT-EEEEES-TT-SHHHHHHHHHHSTTEEEEEEESBHHHHHHHHHHHHHHTTHSEEEEES-GGGTTGGG-SEEEE
T ss_pred             HHhcCCCCEEEEecCCC-cHHHHHHHHhcCccceEEEECccHHHHHHHHHHHHHhccCceeEEEcchhhccccCCCcCEE
Confidence            44489999999999864 8888888888775  677777766432222   23445532 22222321111122479999


Q ss_pred             EEcCCCcccHHHHHhccccCCEEEEe
Q 018067          252 IDTVSAVHPLMPLIGLLKSQGKLVLV  277 (361)
Q Consensus       252 id~~g~~~~~~~~~~~l~~~G~~v~~  277 (361)
                      +-+.+-+......++.|++||+++..
T Consensus       146 ~v~~a~~~ip~~l~~qL~~gGrLV~p  171 (209)
T PF01135_consen  146 IVTAAVPEIPEALLEQLKPGGRLVAP  171 (209)
T ss_dssp             EESSBBSS--HHHHHTEEEEEEEEEE
T ss_pred             EEeeccchHHHHHHHhcCCCcEEEEE
Confidence            99888877567899999999999985

1.1.77 from EC) (PCMT) [] (which is also known as L-isoaspartyl protein carboxyl methyltransferase) is an enzyme that catalyses the transfer of a methyl group from S-adenosylmethionine to the free carboxyl groups of D-aspartyl or L-isoaspartyl residues in a variety of peptides and proteins. The enzyme does not act on normal L-aspartyl residues L-isoaspartyl and D-aspartyl are the products of the spontaneous deamidation and/or isomerisation of normal L-aspartyl and L-asparaginyl residues in proteins. PCMT plays a role in the repair and/or degradation of these damaged proteins; the enzymatic methyl esterification of the abnormal residues can lead to their conversion to normal L-aspartyl residues. The SAM domain is present in most of these proteins.; GO: 0004719 protein-L-isoaspartate (D-aspartate) O-methyltransferase activity, 0006464 protein modification process; PDB: 3LBF_A 1DL5_B 1JG3_B 1JG2_A 1JG1_A 1JG4_A 2YXE_A 2PBF_B 1VBF_C 1R18_A ....

>PRK08217 fabG 3-ketoacyl-(acyl-carrier-protein) reductase; Provisional

Probab=96.63  E-value=0.015  Score=51.29  Aligned_cols=75  Identities=23%  Similarity=0.447  Sum_probs=52.6

Q ss_pred             CCCEEEEEcC-ChHHHHHHHHHHHcCCeEEEEeCCchhHHHHHHH---cCCC---EEecCCCHHHHHH----h---cCCc
Q 018067          183 PGMHVGVVGL-GGLGHVAVKFAKAMGVKVTVISTSPSKKSEAIER---LGAD---SFLVSRDQDEMQA----A---MGTM  248 (361)
Q Consensus       183 ~g~~vlV~Ga-g~vG~~a~~la~~~g~~vi~~~~~~~~~~~~~~~---~g~~---~vv~~~~~~~~~~----~---~~g~  248 (361)
                      +++++||.|+ |.+|+.+++.+...|++|++++++.++.....++   .+.+   ...|..+.+.+.+    +   .+++
T Consensus         4 ~~~~~lItG~~g~iG~~~a~~l~~~G~~vi~~~r~~~~~~~~~~~~~~~~~~~~~~~~D~~~~~~~~~~~~~~~~~~~~i   83 (253)
T PRK08217          4 KDKVIVITGGAQGLGRAMAEYLAQKGAKLALIDLNQEKLEEAVAECGALGTEVRGYAANVTDEEDVEATFAQIAEDFGQL   83 (253)
T ss_pred             CCCEEEEECCCchHHHHHHHHHHHCCCEEEEEeCCHHHHHHHHHHHHhcCCceEEEEcCCCCHHHHHHHHHHHHHHcCCC
Confidence            4788999997 9999999999999999999999887665544333   2433   1234444433322    2   2468


Q ss_pred             cEEEEcCCC
Q 018067          249 DGIIDTVSA  257 (361)
Q Consensus       249 d~vid~~g~  257 (361)
                      |++|+++|.
T Consensus        84 d~vi~~ag~   92 (253)
T PRK08217         84 NGLINNAGI   92 (253)
T ss_pred             CEEEECCCc
Confidence            999999883

>PRK05854 short chain dehydrogenase; Provisional

Probab=96.62  E-value=0.01  Score=54.67  Aligned_cols=75  Identities=20%  Similarity=0.204  Sum_probs=53.9

Q ss_pred             CCCEEEEEcC-ChHHHHHHHHHHHcCCeEEEEeCCchhHHHHHHHc----C-CC---EEecCCCHHHHHHh-------cC
Q 018067          183 PGMHVGVVGL-GGLGHVAVKFAKAMGVKVTVISTSPSKKSEAIERL----G-AD---SFLVSRDQDEMQAA-------MG  246 (361)
Q Consensus       183 ~g~~vlV~Ga-g~vG~~a~~la~~~g~~vi~~~~~~~~~~~~~~~~----g-~~---~vv~~~~~~~~~~~-------~~  246 (361)
                      .|++++|.|+ +++|..++..+...|++|++++++.++..++.+++    + ..   ...|..+.+.++++       .+
T Consensus        13 ~gk~~lITGas~GIG~~~a~~La~~G~~Vil~~R~~~~~~~~~~~l~~~~~~~~v~~~~~Dl~d~~sv~~~~~~~~~~~~   92 (313)
T PRK05854         13 SGKRAVVTGASDGLGLGLARRLAAAGAEVILPVRNRAKGEAAVAAIRTAVPDAKLSLRALDLSSLASVAALGEQLRAEGR   92 (313)
T ss_pred             CCCEEEEeCCCChHHHHHHHHHHHCCCEEEEEeCCHHHHHHHHHHHHHhCCCCceEEEEecCCCHHHHHHHHHHHHHhCC
Confidence            4788999998 99999999999999999999999887665554433    1 11   12355555444332       24


Q ss_pred             CccEEEEcCCC
Q 018067          247 TMDGIIDTVSA  257 (361)
Q Consensus       247 g~d~vid~~g~  257 (361)
                      ++|++|+++|.
T Consensus        93 ~iD~li~nAG~  103 (313)
T PRK05854         93 PIHLLINNAGV  103 (313)
T ss_pred             CccEEEECCcc
Confidence            69999999874

>PRK12828 short chain dehydrogenase; Provisional

Probab=96.62  E-value=0.01  Score=51.78  Aligned_cols=75  Identities=21%  Similarity=0.381  Sum_probs=51.5

Q ss_pred             CCCEEEEEcC-ChHHHHHHHHHHHcCCeEEEEeCCchhHHHHHHHc---CCCE-EecCCCHHHHHH-------hcCCccE
Q 018067          183 PGMHVGVVGL-GGLGHVAVKFAKAMGVKVTVISTSPSKKSEAIERL---GADS-FLVSRDQDEMQA-------AMGTMDG  250 (361)
Q Consensus       183 ~g~~vlV~Ga-g~vG~~a~~la~~~g~~vi~~~~~~~~~~~~~~~~---g~~~-vv~~~~~~~~~~-------~~~g~d~  250 (361)
                      +++++||.|+ |.+|..+++.+...|++|++++++.++..+..+++   +... ..|..+.+.+..       ..+++|+
T Consensus         6 ~~k~vlItGatg~iG~~la~~l~~~G~~v~~~~r~~~~~~~~~~~~~~~~~~~~~~D~~~~~~~~~~~~~~~~~~~~~d~   85 (239)
T PRK12828          6 QGKVVAITGGFGGLGRATAAWLAARGARVALIGRGAAPLSQTLPGVPADALRIGGIDLVDPQAARRAVDEVNRQFGRLDA   85 (239)
T ss_pred             CCCEEEEECCCCcHhHHHHHHHHHCCCeEEEEeCChHhHHHHHHHHhhcCceEEEeecCCHHHHHHHHHHHHHHhCCcCE
Confidence            4789999998 99999999999888999999999776543332322   2221 234444433322       2247999


Q ss_pred             EEEcCCC
Q 018067          251 IIDTVSA  257 (361)
Q Consensus       251 vid~~g~  257 (361)
                      +|+++|.
T Consensus        86 vi~~ag~   92 (239)
T PRK12828         86 LVNIAGA   92 (239)
T ss_pred             EEECCcc
Confidence            9999874

>PRK08263 short chain dehydrogenase; Provisional

Probab=96.62  E-value=0.034  Score=49.98  Aligned_cols=74  Identities=19%  Similarity=0.239  Sum_probs=53.3

Q ss_pred             CCEEEEEcC-ChHHHHHHHHHHHcCCeEEEEeCCchhHHHHHHHcCCCE---EecCCCHHHHHHh-------cCCccEEE
Q 018067          184 GMHVGVVGL-GGLGHVAVKFAKAMGVKVTVISTSPSKKSEAIERLGADS---FLVSRDQDEMQAA-------MGTMDGII  252 (361)
Q Consensus       184 g~~vlV~Ga-g~vG~~a~~la~~~g~~vi~~~~~~~~~~~~~~~~g~~~---vv~~~~~~~~~~~-------~~g~d~vi  252 (361)
                      +++|||.|+ |.+|..++..+...|++|++++++.++...+.+.++...   -.|..+++.+...       .+++|++|
T Consensus         3 ~k~vlItGasg~iG~~~a~~l~~~g~~V~~~~r~~~~~~~~~~~~~~~~~~~~~D~~~~~~~~~~~~~~~~~~~~~d~vi   82 (275)
T PRK08263          3 EKVWFITGASRGFGRAWTEAALERGDRVVATARDTATLADLAEKYGDRLLPLALDVTDRAAVFAAVETAVEHFGRLDIVV   82 (275)
T ss_pred             CCEEEEeCCCChHHHHHHHHHHHCCCEEEEEECCHHHHHHHHHhccCCeeEEEccCCCHHHHHHHHHHHHHHcCCCCEEE
Confidence            467999997 999999999998889999999998877666655544221   2344444433222       24789999


Q ss_pred             EcCCC
Q 018067          253 DTVSA  257 (361)
Q Consensus       253 d~~g~  257 (361)
                      .++|.
T Consensus        83 ~~ag~   87 (275)
T PRK08263         83 NNAGY   87 (275)
T ss_pred             ECCCC
Confidence            99985

>PLN02253 xanthoxin dehydrogenase

Probab=96.60  E-value=0.015  Score=52.43  Aligned_cols=75  Identities=21%  Similarity=0.330  Sum_probs=54.3

Q ss_pred             CCCEEEEEcC-ChHHHHHHHHHHHcCCeEEEEeCCchhHHHHHHHcCC--C---EEecCCCHHHHHHh-------cCCcc
Q 018067          183 PGMHVGVVGL-GGLGHVAVKFAKAMGVKVTVISTSPSKKSEAIERLGA--D---SFLVSRDQDEMQAA-------MGTMD  249 (361)
Q Consensus       183 ~g~~vlV~Ga-g~vG~~a~~la~~~g~~vi~~~~~~~~~~~~~~~~g~--~---~vv~~~~~~~~~~~-------~~g~d  249 (361)
                      .++++||.|+ |.+|.++++.+...|++|+++++.++....+.++++.  .   ...|-.+++.+.++       .+++|
T Consensus        17 ~~k~~lItGas~gIG~~la~~l~~~G~~v~~~~~~~~~~~~~~~~~~~~~~~~~~~~Dl~d~~~~~~~~~~~~~~~g~id   96 (280)
T PLN02253         17 LGKVALVTGGATGIGESIVRLFHKHGAKVCIVDLQDDLGQNVCDSLGGEPNVCFFHCDVTVEDDVSRAVDFTVDKFGTLD   96 (280)
T ss_pred             CCCEEEEECCCchHHHHHHHHHHHcCCEEEEEeCCHHHHHHHHHHhcCCCceEEEEeecCCHHHHHHHHHHHHHHhCCCC
Confidence            4678999997 9999999999888999999998877666555555532  1   12355555444332       24799


Q ss_pred             EEEEcCCC
Q 018067          250 GIIDTVSA  257 (361)
Q Consensus       250 ~vid~~g~  257 (361)
                      ++|+++|.
T Consensus        97 ~li~~Ag~  104 (280)
T PLN02253         97 IMVNNAGL  104 (280)
T ss_pred             EEEECCCc
Confidence            99999875

>PRK06949 short chain dehydrogenase; Provisional

Probab=96.60  E-value=0.012  Score=52.26  Aligned_cols=76  Identities=25%  Similarity=0.309  Sum_probs=54.4

Q ss_pred             CCCCEEEEEcC-ChHHHHHHHHHHHcCCeEEEEeCCchhHHHHHHHc---CCC---EEecCCCHHHHHHh-------cCC
Q 018067          182 KPGMHVGVVGL-GGLGHVAVKFAKAMGVKVTVISTSPSKKSEAIERL---GAD---SFLVSRDQDEMQAA-------MGT  247 (361)
Q Consensus       182 ~~g~~vlV~Ga-g~vG~~a~~la~~~g~~vi~~~~~~~~~~~~~~~~---g~~---~vv~~~~~~~~~~~-------~~g  247 (361)
                      ..+++++|.|+ |.+|..++..+...|++|++++++.++...+...+   +..   ...|..+.+.+..+       .++
T Consensus         7 ~~~k~ilItGasg~IG~~~a~~l~~~G~~Vi~~~r~~~~~~~~~~~l~~~~~~~~~~~~D~~~~~~~~~~~~~~~~~~~~   86 (258)
T PRK06949          7 LEGKVALVTGASSGLGARFAQVLAQAGAKVVLASRRVERLKELRAEIEAEGGAAHVVSLDVTDYQSIKAAVAHAETEAGT   86 (258)
T ss_pred             CCCCEEEEECCCcHHHHHHHHHHHHCCCEEEEEeCCHHHHHHHHHHHHhcCCcEEEEEecCCCHHHHHHHHHHHHHhcCC
Confidence            45789999997 99999999999999999999999887765554432   211   12344444433332       247


Q ss_pred             ccEEEEcCCC
Q 018067          248 MDGIIDTVSA  257 (361)
Q Consensus       248 ~d~vid~~g~  257 (361)
                      +|++|+++|.
T Consensus        87 ~d~li~~ag~   96 (258)
T PRK06949         87 IDILVNNSGV   96 (258)
T ss_pred             CCEEEECCCC
Confidence            9999999984

>PRK07890 short chain dehydrogenase; Provisional

Probab=96.58  E-value=0.012  Score=52.10  Aligned_cols=76  Identities=21%  Similarity=0.304  Sum_probs=54.2

Q ss_pred             CCCCEEEEEcC-ChHHHHHHHHHHHcCCeEEEEeCCchhHHHHHHHc---CCC---EEecCCCHHHHHHh-------cCC
Q 018067          182 KPGMHVGVVGL-GGLGHVAVKFAKAMGVKVTVISTSPSKKSEAIERL---GAD---SFLVSRDQDEMQAA-------MGT  247 (361)
Q Consensus       182 ~~g~~vlV~Ga-g~vG~~a~~la~~~g~~vi~~~~~~~~~~~~~~~~---g~~---~vv~~~~~~~~~~~-------~~g  247 (361)
                      -++.++||.|+ |.+|...+..+...|++|+++++++++...+.+++   +..   ...|..+++.+..+       .+.
T Consensus         3 l~~k~vlItGa~~~IG~~la~~l~~~G~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~D~~~~~~~~~~~~~~~~~~g~   82 (258)
T PRK07890          3 LKGKVVVVSGVGPGLGRTLAVRAARAGADVVLAARTAERLDEVAAEIDDLGRRALAVPTDITDEDQCANLVALALERFGR   82 (258)
T ss_pred             cCCCEEEEECCCCcHHHHHHHHHHHcCCEEEEEeCCHHHHHHHHHHHHHhCCceEEEecCCCCHHHHHHHHHHHHHHcCC
Confidence            35788999997 99999999999999999999999887655554443   222   23344454433321       246


Q ss_pred             ccEEEEcCCC
Q 018067          248 MDGIIDTVSA  257 (361)
Q Consensus       248 ~d~vid~~g~  257 (361)
                      +|++|.++|.
T Consensus        83 ~d~vi~~ag~   92 (258)
T PRK07890         83 VDALVNNAFR   92 (258)
T ss_pred             ccEEEECCcc
Confidence            8999999974

>PRK07478 short chain dehydrogenase; Provisional

Probab=96.58  E-value=0.013  Score=51.97  Aligned_cols=75  Identities=21%  Similarity=0.315  Sum_probs=54.1

Q ss_pred             CCCEEEEEcC-ChHHHHHHHHHHHcCCeEEEEeCCchhHHHHHHHc---CCCE---EecCCCHHHHHHh-------cCCc
Q 018067          183 PGMHVGVVGL-GGLGHVAVKFAKAMGVKVTVISTSPSKKSEAIERL---GADS---FLVSRDQDEMQAA-------MGTM  248 (361)
Q Consensus       183 ~g~~vlV~Ga-g~vG~~a~~la~~~g~~vi~~~~~~~~~~~~~~~~---g~~~---vv~~~~~~~~~~~-------~~g~  248 (361)
                      .+++++|.|+ |++|..++..+...|++|+++++++++...+.+++   +.+.   ..|..+++.+..+       .+++
T Consensus         5 ~~k~~lItGas~giG~~ia~~l~~~G~~v~~~~r~~~~~~~~~~~~~~~~~~~~~~~~D~~~~~~~~~~~~~~~~~~~~i   84 (254)
T PRK07478          5 NGKVAIITGASSGIGRAAAKLFAREGAKVVVGARRQAELDQLVAEIRAEGGEAVALAGDVRDEAYAKALVALAVERFGGL   84 (254)
T ss_pred             CCCEEEEeCCCChHHHHHHHHHHHCCCEEEEEeCCHHHHHHHHHHHHhcCCcEEEEEcCCCCHHHHHHHHHHHHHhcCCC
Confidence            4678999997 99999999999999999999999887766654443   3221   2244555433322       2479


Q ss_pred             cEEEEcCCC
Q 018067          249 DGIIDTVSA  257 (361)
Q Consensus       249 d~vid~~g~  257 (361)
                      |++|+++|.
T Consensus        85 d~li~~ag~   93 (254)
T PRK07478         85 DIAFNNAGT   93 (254)
T ss_pred             CEEEECCCC
Confidence            999999984

>PRK06940 short chain dehydrogenase; Provisional

Probab=96.58  E-value=0.027  Score=50.71  Aligned_cols=96  Identities=21%  Similarity=0.322  Sum_probs=61.8

Q ss_pred             CCEEEEEcCChHHHHHHHHHHHcCCeEEEEeCCchhHHHHHHHc---CCC---EEecCCCHHHHHHh------cCCccEE
Q 018067          184 GMHVGVVGLGGLGHVAVKFAKAMGVKVTVISTSPSKKSEAIERL---GAD---SFLVSRDQDEMQAA------MGTMDGI  251 (361)
Q Consensus       184 g~~vlV~Gag~vG~~a~~la~~~g~~vi~~~~~~~~~~~~~~~~---g~~---~vv~~~~~~~~~~~------~~g~d~v  251 (361)
                      +++++|.|+|++|..++..+. .|++|++++++.++...+.+++   +.+   ...|-.+++.+..+      .+++|++
T Consensus         2 ~k~~lItGa~gIG~~la~~l~-~G~~Vv~~~r~~~~~~~~~~~l~~~~~~~~~~~~Dv~d~~~i~~~~~~~~~~g~id~l   80 (275)
T PRK06940          2 KEVVVVIGAGGIGQAIARRVG-AGKKVLLADYNEENLEAAAKTLREAGFDVSTQEVDVSSRESVKALAATAQTLGPVTGL   80 (275)
T ss_pred             CCEEEEECCChHHHHHHHHHh-CCCEEEEEeCCHHHHHHHHHHHHhcCCeEEEEEeecCCHHHHHHHHHHHHhcCCCCEE
Confidence            357888899999999999885 7999999999876655444333   322   12345554433322      1479999


Q ss_pred             EEcCCCcc------------------cHHHHHhccccCCEEEEecCC
Q 018067          252 IDTVSAVH------------------PLMPLIGLLKSQGKLVLVGAP  280 (361)
Q Consensus       252 id~~g~~~------------------~~~~~~~~l~~~G~~v~~g~~  280 (361)
                      |+++|...                  .++.+...++++|+++.+++.
T Consensus        81 i~nAG~~~~~~~~~~~~~vN~~g~~~l~~~~~~~m~~~g~iv~isS~  127 (275)
T PRK06940         81 VHTAGVSPSQASPEAILKVDLYGTALVLEEFGKVIAPGGAGVVIASQ  127 (275)
T ss_pred             EECCCcCCchhhHHHHHHHhhHHHHHHHHHHHHHHhhCCCEEEEEec
Confidence            99998532                  122334455566777777653

>PRK07574 formate dehydrogenase; Provisional

Probab=96.57  E-value=0.037  Score=52.18  Aligned_cols=90  Identities=20%  Similarity=0.260  Sum_probs=64.9

Q ss_pred             CCCEEEEEcCChHHHHHHHHHHHcCCeEEEEeCCchhHHHHHHHcCCCEEecCCCHHHHHHhcCCccEEEEcCCCcccH-
Q 018067          183 PGMHVGVVGLGGLGHVAVKFAKAMGVKVTVISTSPSKKSEAIERLGADSFLVSRDQDEMQAAMGTMDGIIDTVSAVHPL-  261 (361)
Q Consensus       183 ~g~~vlV~Gag~vG~~a~~la~~~g~~vi~~~~~~~~~~~~~~~~g~~~vv~~~~~~~~~~~~~g~d~vid~~g~~~~~-  261 (361)
                      .|++|.|+|.|.||+.+++.++.+|.+|+..++..... ...+.+|+..   ..   .+.++....|+|+-+.....-. 
T Consensus       191 ~gktVGIvG~G~IG~~vA~~l~~fG~~V~~~dr~~~~~-~~~~~~g~~~---~~---~l~ell~~aDvV~l~lPlt~~T~  263 (385)
T PRK07574        191 EGMTVGIVGAGRIGLAVLRRLKPFDVKLHYTDRHRLPE-EVEQELGLTY---HV---SFDSLVSVCDVVTIHCPLHPETE  263 (385)
T ss_pred             CCCEEEEECCCHHHHHHHHHHHhCCCEEEEECCCCCch-hhHhhcCcee---cC---CHHHHhhcCCEEEEcCCCCHHHH
Confidence            57899999999999999999999999999998875322 2223455431   11   2345556789998887743211 


Q ss_pred             ----HHHHhccccCCEEEEecC
Q 018067          262 ----MPLIGLLKSQGKLVLVGA  279 (361)
Q Consensus       262 ----~~~~~~l~~~G~~v~~g~  279 (361)
                          ...+..|+++..+|.++.
T Consensus       264 ~li~~~~l~~mk~ga~lIN~aR  285 (385)
T PRK07574        264 HLFDADVLSRMKRGSYLVNTAR  285 (385)
T ss_pred             HHhCHHHHhcCCCCcEEEECCC
Confidence                246778899999999875

>PRK09072 short chain dehydrogenase; Provisional

Probab=96.57  E-value=0.029  Score=50.06  Aligned_cols=75  Identities=19%  Similarity=0.304  Sum_probs=53.2

Q ss_pred             CCCEEEEEcC-ChHHHHHHHHHHHcCCeEEEEeCCchhHHHHHHHc--CCC-E--EecCCCHHHHHHh------cCCccE
Q 018067          183 PGMHVGVVGL-GGLGHVAVKFAKAMGVKVTVISTSPSKKSEAIERL--GAD-S--FLVSRDQDEMQAA------MGTMDG  250 (361)
Q Consensus       183 ~g~~vlV~Ga-g~vG~~a~~la~~~g~~vi~~~~~~~~~~~~~~~~--g~~-~--vv~~~~~~~~~~~------~~g~d~  250 (361)
                      ++.++||.|+ |.+|...+..+...|++|++++++.++...+.+++  +.. .  ..|..+++.+..+      .+++|+
T Consensus         4 ~~~~vlItG~s~~iG~~ia~~l~~~G~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~D~~d~~~~~~~~~~~~~~~~id~   83 (263)
T PRK09072          4 KDKRVLLTGASGGIGQALAEALAAAGARLLLVGRNAEKLEALAARLPYPGRHRWVVADLTSEAGREAVLARAREMGGINV   83 (263)
T ss_pred             CCCEEEEECCCchHHHHHHHHHHHCCCEEEEEECCHHHHHHHHHHHhcCCceEEEEccCCCHHHHHHHHHHHHhcCCCCE
Confidence            4678999987 99999999999999999999999887766664443  211 1  2244444433322      246899


Q ss_pred             EEEcCCC
Q 018067          251 IIDTVSA  257 (361)
Q Consensus       251 vid~~g~  257 (361)
                      +|.++|.
T Consensus        84 lv~~ag~   90 (263)
T PRK09072         84 LINNAGV   90 (263)
T ss_pred             EEECCCC
Confidence            9999885

>PRK06719 precorrin-2 dehydrogenase; Validated

Probab=96.57  E-value=0.024  Score=46.48  Aligned_cols=91  Identities=16%  Similarity=0.062  Sum_probs=57.7

Q ss_pred             CCCCEEEEEcCChHHHHHHHHHHHcCCeEEEEeCCchhHHHHHHHcCCCEEecCCCHHHHHHhcCCccEEEEcCCCcccH
Q 018067          182 KPGMHVGVVGLGGLGHVAVKFAKAMGVKVTVISTSPSKKSEAIERLGADSFLVSRDQDEMQAAMGTMDGIIDTVSAVHPL  261 (361)
Q Consensus       182 ~~g~~vlV~Gag~vG~~a~~la~~~g~~vi~~~~~~~~~~~~~~~~g~~~vv~~~~~~~~~~~~~g~d~vid~~g~~~~~  261 (361)
                      -.|.+|+|+|+|.+|..-++.+...|++|++++  ++...++ ++++... +..+.  ....--.++|+||-+++... +
T Consensus        11 l~~~~vlVvGGG~va~rka~~Ll~~ga~V~VIs--p~~~~~l-~~l~~i~-~~~~~--~~~~dl~~a~lViaaT~d~e-~   83 (157)
T PRK06719         11 LHNKVVVIIGGGKIAYRKASGLKDTGAFVTVVS--PEICKEM-KELPYIT-WKQKT--FSNDDIKDAHLIYAATNQHA-V   83 (157)
T ss_pred             cCCCEEEEECCCHHHHHHHHHHHhCCCEEEEEc--CccCHHH-HhccCcE-EEecc--cChhcCCCceEEEECCCCHH-H
Confidence            367889999999999999999988999998884  3333344 2344211 11111  11112247999999999887 6


Q ss_pred             HHHHhccccCCEEEEecC
Q 018067          262 MPLIGLLKSQGKLVLVGA  279 (361)
Q Consensus       262 ~~~~~~l~~~G~~v~~g~  279 (361)
                      +..+...++.+.++....
T Consensus        84 N~~i~~~a~~~~~vn~~d  101 (157)
T PRK06719         84 NMMVKQAAHDFQWVNVVS  101 (157)
T ss_pred             HHHHHHHHHHCCcEEECC
Confidence            655554543344555543

>PRK07523 gluconate 5-dehydrogenase; Provisional

Probab=96.56  E-value=0.014  Score=51.73  Aligned_cols=75  Identities=25%  Similarity=0.384  Sum_probs=53.8

Q ss_pred             CCCEEEEEcC-ChHHHHHHHHHHHcCCeEEEEeCCchhHHHHHHHc---CCCE---EecCCCHHHHHHh-------cCCc
Q 018067          183 PGMHVGVVGL-GGLGHVAVKFAKAMGVKVTVISTSPSKKSEAIERL---GADS---FLVSRDQDEMQAA-------MGTM  248 (361)
Q Consensus       183 ~g~~vlV~Ga-g~vG~~a~~la~~~g~~vi~~~~~~~~~~~~~~~~---g~~~---vv~~~~~~~~~~~-------~~g~  248 (361)
                      .++++||.|+ |.+|..+++.+...|++|+++++++++...+.+++   |...   ..|..+.+.+..+       .++.
T Consensus         9 ~~k~vlItGa~g~iG~~ia~~l~~~G~~V~~~~r~~~~~~~~~~~i~~~~~~~~~~~~D~~~~~~~~~~~~~~~~~~~~~   88 (255)
T PRK07523          9 TGRRALVTGSSQGIGYALAEGLAQAGAEVILNGRDPAKLAAAAESLKGQGLSAHALAFDVTDHDAVRAAIDAFEAEIGPI   88 (255)
T ss_pred             CCCEEEEECCcchHHHHHHHHHHHcCCEEEEEeCCHHHHHHHHHHHHhcCceEEEEEccCCCHHHHHHHHHHHHHhcCCC
Confidence            5789999997 99999999999889999999998877655543333   3221   2255555444333       2469


Q ss_pred             cEEEEcCCC
Q 018067          249 DGIIDTVSA  257 (361)
Q Consensus       249 d~vid~~g~  257 (361)
                      |++|+++|.
T Consensus        89 d~li~~ag~   97 (255)
T PRK07523         89 DILVNNAGM   97 (255)
T ss_pred             CEEEECCCC
Confidence            999999985

>PRK07453 protochlorophyllide oxidoreductase; Validated

Probab=96.55  E-value=0.012  Score=54.39  Aligned_cols=74  Identities=20%  Similarity=0.240  Sum_probs=53.6

Q ss_pred             CCCEEEEEcC-ChHHHHHHHHHHHcCCeEEEEeCCchhHHHHHHHcCC---C-E--EecCCCHHHHHHh-------cCCc
Q 018067          183 PGMHVGVVGL-GGLGHVAVKFAKAMGVKVTVISTSPSKKSEAIERLGA---D-S--FLVSRDQDEMQAA-------MGTM  248 (361)
Q Consensus       183 ~g~~vlV~Ga-g~vG~~a~~la~~~g~~vi~~~~~~~~~~~~~~~~g~---~-~--vv~~~~~~~~~~~-------~~g~  248 (361)
                      .+++++|.|+ |+||..+++.+...|++|++++++.++...+.+++..   . .  ..|..+.+.+..+       .+++
T Consensus         5 ~~k~vlVTGas~gIG~~~a~~L~~~G~~V~~~~r~~~~~~~~~~~l~~~~~~~~~~~~Dl~~~~~v~~~~~~~~~~~~~i   84 (322)
T PRK07453          5 AKGTVIITGASSGVGLYAAKALAKRGWHVIMACRNLKKAEAAAQELGIPPDSYTIIHIDLGDLDSVRRFVDDFRALGKPL   84 (322)
T ss_pred             CCCEEEEEcCCChHHHHHHHHHHHCCCEEEEEECCHHHHHHHHHHhhccCCceEEEEecCCCHHHHHHHHHHHHHhCCCc
Confidence            4678999997 9999999999988999999999988776666555531   1 1  2344554433322       1359


Q ss_pred             cEEEEcCC
Q 018067          249 DGIIDTVS  256 (361)
Q Consensus       249 d~vid~~g  256 (361)
                      |++|+++|
T Consensus        85 D~li~nAg   92 (322)
T PRK07453         85 DALVCNAA   92 (322)
T ss_pred             cEEEECCc
Confidence            99999988

>PRK05884 short chain dehydrogenase; Provisional

Probab=96.55  E-value=0.016  Score=50.55  Aligned_cols=71  Identities=23%  Similarity=0.260  Sum_probs=53.0

Q ss_pred             EEEEEcC-ChHHHHHHHHHHHcCCeEEEEeCCchhHHHHHHHcCCCE-EecCCCHHHHHHh----cCCccEEEEcCC
Q 018067          186 HVGVVGL-GGLGHVAVKFAKAMGVKVTVISTSPSKKSEAIERLGADS-FLVSRDQDEMQAA----MGTMDGIIDTVS  256 (361)
Q Consensus       186 ~vlV~Ga-g~vG~~a~~la~~~g~~vi~~~~~~~~~~~~~~~~g~~~-vv~~~~~~~~~~~----~~g~d~vid~~g  256 (361)
                      +++|.|+ |.+|...++.+...|++|++++++.++...+.++.+... ..|..+++.+..+    .+.+|++|+++|
T Consensus         2 ~vlItGas~giG~~ia~~l~~~g~~v~~~~r~~~~~~~~~~~~~~~~~~~D~~~~~~v~~~~~~~~~~id~lv~~ag   78 (223)
T PRK05884          2 EVLVTGGDTDLGRTIAEGFRNDGHKVTLVGARRDDLEVAAKELDVDAIVCDNTDPASLEEARGLFPHHLDTIVNVPA   78 (223)
T ss_pred             eEEEEeCCchHHHHHHHHHHHCCCEEEEEeCCHHHHHHHHHhccCcEEecCCCCHHHHHHHHHHHhhcCcEEEECCC
Confidence            4889987 999999999999899999999998877766666655442 2355555544433    236899999876

>PRK06484 short chain dehydrogenase; Validated

Probab=96.54  E-value=0.016  Score=57.27  Aligned_cols=76  Identities=22%  Similarity=0.382  Sum_probs=58.3

Q ss_pred             CCCCEEEEEcC-ChHHHHHHHHHHHcCCeEEEEeCCchhHHHHHHHcCCCE---EecCCCHHHHHHh-------cCCccE
Q 018067          182 KPGMHVGVVGL-GGLGHVAVKFAKAMGVKVTVISTSPSKKSEAIERLGADS---FLVSRDQDEMQAA-------MGTMDG  250 (361)
Q Consensus       182 ~~g~~vlV~Ga-g~vG~~a~~la~~~g~~vi~~~~~~~~~~~~~~~~g~~~---vv~~~~~~~~~~~-------~~g~d~  250 (361)
                      ..++++||.|+ +++|..+++.+...|++|++++++.++...+.++++...   ..|..+++.+.++       .+++|+
T Consensus         3 ~~~k~~lITGas~gIG~aia~~l~~~G~~V~~~~r~~~~~~~~~~~~~~~~~~~~~D~~~~~~~~~~~~~~~~~~g~iD~   82 (520)
T PRK06484          3 AQSRVVLVTGAAGGIGRAACQRFARAGDQVVVADRNVERARERADSLGPDHHALAMDVSDEAQIREGFEQLHREFGRIDV   82 (520)
T ss_pred             CCCeEEEEECCCcHHHHHHHHHHHHCCCEEEEEeCCHHHHHHHHHHhCCceeEEEeccCCHHHHHHHHHHHHHHhCCCCE
Confidence            35788999997 999999999999999999999999888777777776432   3455555443332       247999


Q ss_pred             EEEcCCC
Q 018067          251 IIDTVSA  257 (361)
Q Consensus       251 vid~~g~  257 (361)
                      +|+++|.
T Consensus        83 li~nag~   89 (520)
T PRK06484         83 LVNNAGV   89 (520)
T ss_pred             EEECCCc
Confidence            9999875

>PRK08594 enoyl-(acyl carrier protein) reductase; Provisional

Probab=96.54  E-value=0.055  Score=48.22  Aligned_cols=99  Identities=15%  Similarity=0.214  Sum_probs=64.1

Q ss_pred             CCCEEEEEcC---ChHHHHHHHHHHHcCCeEEEEeCCc---hhHHHHHHHc-CCC---EEecCCCHHHHHH----h---c
Q 018067          183 PGMHVGVVGL---GGLGHVAVKFAKAMGVKVTVISTSP---SKKSEAIERL-GAD---SFLVSRDQDEMQA----A---M  245 (361)
Q Consensus       183 ~g~~vlV~Ga---g~vG~~a~~la~~~g~~vi~~~~~~---~~~~~~~~~~-g~~---~vv~~~~~~~~~~----~---~  245 (361)
                      .|++++|.|+   +++|.++++.+...|++|+++.++.   ++.+++.+++ +..   ...|-.+++.+..    +   .
T Consensus         6 ~~k~~lItGa~~s~GIG~aia~~la~~G~~v~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~Dv~d~~~v~~~~~~~~~~~   85 (257)
T PRK08594          6 EGKTYVVMGVANKRSIAWGIARSLHNAGAKLVFTYAGERLEKEVRELADTLEGQESLLLPCDVTSDEEITACFETIKEEV   85 (257)
T ss_pred             CCCEEEEECCCCCCCHHHHHHHHHHHCCCEEEEecCcccchHHHHHHHHHcCCCceEEEecCCCCHHHHHHHHHHHHHhC
Confidence            4788999996   5999999999999999999886542   3445554554 222   1235555443332    2   2


Q ss_pred             CCccEEEEcCCCcc-----------------------------cHHHHHhccccCCEEEEecCCC
Q 018067          246 GTMDGIIDTVSAVH-----------------------------PLMPLIGLLKSQGKLVLVGAPE  281 (361)
Q Consensus       246 ~g~d~vid~~g~~~-----------------------------~~~~~~~~l~~~G~~v~~g~~~  281 (361)
                      +++|++++++|...                             ..+.++..++++|+++.++...
T Consensus        86 g~ld~lv~nag~~~~~~~~~~~~~~~~~~~~~~~~~n~~~~~~~~~~~~~~~~~~g~Iv~isS~~  150 (257)
T PRK08594         86 GVIHGVAHCIAFANKEDLRGEFLETSRDGFLLAQNISAYSLTAVAREAKKLMTEGGSIVTLTYLG  150 (257)
T ss_pred             CCccEEEECcccCCCCcCCCccccCCHHHHHHHHhhhHHHHHHHHHHHHHhcccCceEEEEcccC
Confidence            46999999987310                             0123444566789999987643

>COG2423 Predicted ornithine cyclodeaminase, mu-crystallin homolog [Amino acid transport and metabolism]

Probab=96.51  E-value=0.03  Score=51.47  Aligned_cols=113  Identities=17%  Similarity=0.205  Sum_probs=77.6

Q ss_pred             hhcCCCCCCCEEEEEcCChHHHHHHHHHHH-cCC-eEEEEeCCchhHHHHHHHcCCCEEecCCCHHHHHHhcCCccEEEE
Q 018067          176 RFYGLDKPGMHVGVVGLGGLGHVAVKFAKA-MGV-KVTVISTSPSKKSEAIERLGADSFLVSRDQDEMQAAMGTMDGIID  253 (361)
Q Consensus       176 ~~~~~~~~g~~vlV~Gag~vG~~a~~la~~-~g~-~vi~~~~~~~~~~~~~~~~g~~~vv~~~~~~~~~~~~~g~d~vid  253 (361)
                      +..++ +.-.++.|+|+|..+.+.++.++. ++. ++.+.+++++..+.+++.+......+-...+..++.-.+.|+|+-
T Consensus       123 ~~LA~-~da~~laiIGaG~qA~~ql~a~~~v~~~~~I~i~~r~~~~~e~~a~~l~~~~~~~v~a~~s~~~av~~aDiIvt  201 (330)
T COG2423         123 KYLAR-KDASTLAIIGAGAQARTQLEALKAVRDIREIRVYSRDPEAAEAFAARLRKRGGEAVGAADSAEEAVEGADIVVT  201 (330)
T ss_pred             HHhcc-CCCcEEEEECCcHHHHHHHHHHHhhCCccEEEEEcCCHHHHHHHHHHHHhhcCccceeccCHHHHhhcCCEEEE
Confidence            44443 567788999999999999999886 465 888899998887777654432211111122333556678999999


Q ss_pred             cCCCcccHHHHHhccccCCEEEEecCCC-CCcccChHH
Q 018067          254 TVSAVHPLMPLIGLLKSQGKLVLVGAPE-KPLELPAFS  290 (361)
Q Consensus       254 ~~g~~~~~~~~~~~l~~~G~~v~~g~~~-~~~~~~~~~  290 (361)
                      |+.+.. .-...+.++++-.+..+|... +.-+++..-
T Consensus       202 ~T~s~~-Pil~~~~l~~G~hI~aiGad~p~k~Eld~e~  238 (330)
T COG2423         202 ATPSTE-PVLKAEWLKPGTHINAIGADAPGKRELDPEV  238 (330)
T ss_pred             ecCCCC-CeecHhhcCCCcEEEecCCCCcccccCCHHH
Confidence            998866 445667889999999999743 334454433

>PRK06505 enoyl-(acyl carrier protein) reductase; Provisional

Probab=96.51  E-value=0.022  Score=51.24  Aligned_cols=75  Identities=17%  Similarity=0.227  Sum_probs=51.4

Q ss_pred             CCCEEEEEcCC---hHHHHHHHHHHHcCCeEEEEeCCch---hHHHHHHHcCCCE--EecCCCHHHHHHh-------cCC
Q 018067          183 PGMHVGVVGLG---GLGHVAVKFAKAMGVKVTVISTSPS---KKSEAIERLGADS--FLVSRDQDEMQAA-------MGT  247 (361)
Q Consensus       183 ~g~~vlV~Gag---~vG~~a~~la~~~g~~vi~~~~~~~---~~~~~~~~~g~~~--vv~~~~~~~~~~~-------~~g  247 (361)
                      +++++||.|++   +||.++++.+...|++|+++.++++   +...+.+++|...  ..|-.+.+.+..+       .+.
T Consensus         6 ~~k~~lVTGas~~~GIG~aiA~~la~~Ga~V~~~~r~~~~~~~~~~~~~~~g~~~~~~~Dv~d~~~v~~~~~~~~~~~g~   85 (271)
T PRK06505          6 QGKRGLIMGVANDHSIAWGIAKQLAAQGAELAFTYQGEALGKRVKPLAESLGSDFVLPCDVEDIASVDAVFEALEKKWGK   85 (271)
T ss_pred             CCCEEEEeCCCCCCcHHHHHHHHHHhCCCEEEEecCchHHHHHHHHHHHhcCCceEEeCCCCCHHHHHHHHHHHHHHhCC
Confidence            56889999984   8999999999999999999877643   2233334445332  2355555433322       247


Q ss_pred             ccEEEEcCCC
Q 018067          248 MDGIIDTVSA  257 (361)
Q Consensus       248 ~d~vid~~g~  257 (361)
                      +|++|+++|.
T Consensus        86 iD~lVnnAG~   95 (271)
T PRK06505         86 LDFVVHAIGF   95 (271)
T ss_pred             CCEEEECCcc
Confidence            9999999984

>PLN03139 formate dehydrogenase; Provisional

Probab=96.51  E-value=0.034  Score=52.43  Aligned_cols=90  Identities=18%  Similarity=0.197  Sum_probs=63.9

Q ss_pred             CCCEEEEEcCChHHHHHHHHHHHcCCeEEEEeCCchhHHHHHHHcCCCEEecCCCHHHHHHhcCCccEEEEcCCCcccH-
Q 018067          183 PGMHVGVVGLGGLGHVAVKFAKAMGVKVTVISTSPSKKSEAIERLGADSFLVSRDQDEMQAAMGTMDGIIDTVSAVHPL-  261 (361)
Q Consensus       183 ~g~~vlV~Gag~vG~~a~~la~~~g~~vi~~~~~~~~~~~~~~~~g~~~vv~~~~~~~~~~~~~g~d~vid~~g~~~~~-  261 (361)
                      .|++|.|+|.|.||...++.++.+|++|++.++..... +..++.|+...      +.+.++....|+|+-++...... 
T Consensus       198 ~gktVGIVG~G~IG~~vA~~L~afG~~V~~~d~~~~~~-~~~~~~g~~~~------~~l~ell~~sDvV~l~lPlt~~T~  270 (386)
T PLN03139        198 EGKTVGTVGAGRIGRLLLQRLKPFNCNLLYHDRLKMDP-ELEKETGAKFE------EDLDAMLPKCDVVVINTPLTEKTR  270 (386)
T ss_pred             CCCEEEEEeecHHHHHHHHHHHHCCCEEEEECCCCcch-hhHhhcCceec------CCHHHHHhhCCEEEEeCCCCHHHH
Confidence            68899999999999999999999999999888764322 22244554321      12334445689998877642211 


Q ss_pred             ----HHHHhccccCCEEEEecC
Q 018067          262 ----MPLIGLLKSQGKLVLVGA  279 (361)
Q Consensus       262 ----~~~~~~l~~~G~~v~~g~  279 (361)
                          ...+..|+++..+|.++.
T Consensus       271 ~li~~~~l~~mk~ga~lIN~aR  292 (386)
T PLN03139        271 GMFNKERIAKMKKGVLIVNNAR  292 (386)
T ss_pred             HHhCHHHHhhCCCCeEEEECCC
Confidence                246778899999988875

>cd05311 NAD_bind_2_malic_enz NAD(P) binding domain of malic enzyme (ME), subgroup 2

Probab=96.49  E-value=0.09  Score=45.92  Aligned_cols=102  Identities=14%  Similarity=0.216  Sum_probs=63.7

Q ss_pred             hhHhhhcCCCCCCCEEEEEcCChHHHHHHHHHHHcCCe---EEEEeCC----chhH-------HHHHHHcCCCEEecCCC
Q 018067          172 YSPLRFYGLDKPGMHVGVVGLGGLGHVAVKFAKAMGVK---VTVISTS----PSKK-------SEAIERLGADSFLVSRD  237 (361)
Q Consensus       172 ~~~l~~~~~~~~g~~vlV~Gag~vG~~a~~la~~~g~~---vi~~~~~----~~~~-------~~~~~~~g~~~vv~~~~  237 (361)
                      ..+++....--.+.+++|+|+|..|..++..+...|++   ++++++.    .++.       ..+++.++... .+   
T Consensus        13 ~~al~~~g~~l~~~rvlvlGAGgAg~aiA~~L~~~G~~~~~i~ivdr~gl~~~~r~~~L~~~~~~la~~~~~~~-~~---   88 (226)
T cd05311          13 LNALKLVGKKIEEVKIVINGAGAAGIAIARLLLAAGAKPENIVVVDSKGVIYEGREDDLNPDKNEIAKETNPEK-TG---   88 (226)
T ss_pred             HHHHHHhCCCccCCEEEEECchHHHHHHHHHHHHcCcCcceEEEEeCCCccccccchhhhHHHHHHHHHhccCc-cc---
Confidence            34455444324678999999999999999999988985   8888887    3331       33444443221 11   


Q ss_pred             HHHHHHhcCCccEEEEcCCCcccHHHHHhccccCCEEEEec
Q 018067          238 QDEMQAAMGTMDGIIDTVSAVHPLMPLIGLLKSQGKLVLVG  278 (361)
Q Consensus       238 ~~~~~~~~~g~d~vid~~g~~~~~~~~~~~l~~~G~~v~~g  278 (361)
                      .+ +.+...++|++|++++....-...++.+.++..+..+.
T Consensus        89 ~~-l~~~l~~~dvlIgaT~~G~~~~~~l~~m~~~~ivf~ls  128 (226)
T cd05311          89 GT-LKEALKGADVFIGVSRPGVVKKEMIKKMAKDPIVFALA  128 (226)
T ss_pred             CC-HHHHHhcCCEEEeCCCCCCCCHHHHHhhCCCCEEEEeC
Confidence            11 22222459999999974332235666666766655554

Malic enzyme (ME), a member of the amino acid dehydrogenase (DH)-like domain family, catalyzes the oxidative decarboxylation of L-malate to pyruvate in the presence of cations (typically Mg++ or Mn++) with the concomitant reduction of cofactor NAD+ or NADP+. ME has been found in all organisms, and plays important roles in diverse metabolic pathways such as photosynthesis and lipogenesis. This enzyme generally forms homotetramers. The conversion of malate to pyruvate by ME typically involves oxidation of malate to produce oxaloacetate, followed by decarboxylation of oxaloacetate to produce pyruvate and CO2. This subfamily consists primarily of archaeal and bacterial ME. Amino acid DH-like NAD(P)-binding domains are members of the Rossmann fold superfamily and include glutamate, leucine, and phenylalanine DHs, methylene tetrahydrofolate DH, methylene-tetrahydromethanopterin DH, methylene-tetrahydroph

>PRK07231 fabG 3-ketoacyl-(acyl-carrier-protein) reductase; Provisional

Probab=96.48  E-value=0.013  Score=51.75  Aligned_cols=75  Identities=19%  Similarity=0.274  Sum_probs=54.0

Q ss_pred             CCCEEEEEcC-ChHHHHHHHHHHHcCCeEEEEeCCchhHHHHHHHcC--CC---EEecCCCHHHHHHh-------cCCcc
Q 018067          183 PGMHVGVVGL-GGLGHVAVKFAKAMGVKVTVISTSPSKKSEAIERLG--AD---SFLVSRDQDEMQAA-------MGTMD  249 (361)
Q Consensus       183 ~g~~vlV~Ga-g~vG~~a~~la~~~g~~vi~~~~~~~~~~~~~~~~g--~~---~vv~~~~~~~~~~~-------~~g~d  249 (361)
                      .+.++||.|+ |.+|..+++.+...|++|++++++.++...+...+.  ..   ...|..+++.+..+       .+++|
T Consensus         4 ~~~~vlItGasg~iG~~l~~~l~~~G~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~D~~~~~~~~~~~~~~~~~~~~~d   83 (251)
T PRK07231          4 EGKVAIVTGASSGIGEGIARRFAAEGARVVVTDRNEEAAERVAAEILAGGRAIAVAADVSDEADVEAAVAAALERFGSVD   83 (251)
T ss_pred             CCcEEEEECCCChHHHHHHHHHHHCCCEEEEEeCCHHHHHHHHHHHhcCCeEEEEECCCCCHHHHHHHHHHHHHHhCCCC
Confidence            4678999998 999999999999999999999999877666544443  21   12244454444332       23689


Q ss_pred             EEEEcCCC
Q 018067          250 GIIDTVSA  257 (361)
Q Consensus       250 ~vid~~g~  257 (361)
                      ++|.++|.
T Consensus        84 ~vi~~ag~   91 (251)
T PRK07231         84 ILVNNAGT   91 (251)
T ss_pred             EEEECCCC
Confidence            99999985

>PRK09186 flagellin modification protein A; Provisional

Probab=96.47  E-value=0.015  Score=51.47  Aligned_cols=74  Identities=23%  Similarity=0.310  Sum_probs=53.5

Q ss_pred             CCCEEEEEcC-ChHHHHHHHHHHHcCCeEEEEeCCchhHHHHHHHc----CCC---E-EecCCCHHHHHHhc-------C
Q 018067          183 PGMHVGVVGL-GGLGHVAVKFAKAMGVKVTVISTSPSKKSEAIERL----GAD---S-FLVSRDQDEMQAAM-------G  246 (361)
Q Consensus       183 ~g~~vlV~Ga-g~vG~~a~~la~~~g~~vi~~~~~~~~~~~~~~~~----g~~---~-vv~~~~~~~~~~~~-------~  246 (361)
                      .++++||.|+ |.+|...+..+...|++|+++.++.++..++.+++    +..   . ..|..+++.+..+.       +
T Consensus         3 ~~k~vlItGas~giG~~~a~~l~~~g~~v~~~~r~~~~~~~~~~~l~~~~~~~~~~~~~~Dl~d~~~~~~~~~~~~~~~~   82 (256)
T PRK09186          3 KGKTILITGAGGLIGSALVKAILEAGGIVIAADIDKEALNELLESLGKEFKSKKLSLVELDITDQESLEEFLSKSAEKYG   82 (256)
T ss_pred             CCCEEEEECCCchHHHHHHHHHHHCCCEEEEEecChHHHHHHHHHHHhhcCCCceeEEEecCCCHHHHHHHHHHHHHHcC
Confidence            4788999998 99999999999999999999998877665554443    221   1 23555554443322       3


Q ss_pred             CccEEEEcCC
Q 018067          247 TMDGIIDTVS  256 (361)
Q Consensus       247 g~d~vid~~g  256 (361)
                      ++|++|++++
T Consensus        83 ~id~vi~~A~   92 (256)
T PRK09186         83 KIDGAVNCAY   92 (256)
T ss_pred             CccEEEECCc
Confidence            5899999986

>KOG1201 consensus Hydroxysteroid 17-beta dehydrogenase 11 [Secondary metabolites biosynthesis, transport and catabolism]

Probab=96.42  E-value=0.02  Score=51.08  Aligned_cols=75  Identities=20%  Similarity=0.306  Sum_probs=54.9

Q ss_pred             CCCEEEEEcC-ChHHHHHHHHHHHcCCeEEEEeCCchhHHHHHHHc---C-C-CEEecCCCHHHHHH-------hcCCcc
Q 018067          183 PGMHVGVVGL-GGLGHVAVKFAKAMGVKVTVISTSPSKKSEAIERL---G-A-DSFLVSRDQDEMQA-------AMGTMD  249 (361)
Q Consensus       183 ~g~~vlV~Ga-g~vG~~a~~la~~~g~~vi~~~~~~~~~~~~~~~~---g-~-~~vv~~~~~~~~~~-------~~~g~d  249 (361)
                      .|+.|||.|+ +++|.+.++-.-.+|+++++.+.+.+...+..++.   | + ..+.|-++.+.+.+       ..+.+|
T Consensus        37 ~g~~vLITGgg~GlGr~ialefa~rg~~~vl~Din~~~~~etv~~~~~~g~~~~y~cdis~~eei~~~a~~Vk~e~G~V~  116 (300)
T KOG1201|consen   37 SGEIVLITGGGSGLGRLIALEFAKRGAKLVLWDINKQGNEETVKEIRKIGEAKAYTCDISDREEIYRLAKKVKKEVGDVD  116 (300)
T ss_pred             cCCEEEEeCCCchHHHHHHHHHHHhCCeEEEEeccccchHHHHHHHHhcCceeEEEecCCCHHHHHHHHHHHHHhcCCce
Confidence            6899999987 89999888888888999988888877665554444   3 2 24556666544333       235799


Q ss_pred             EEEEcCCC
Q 018067          250 GIIDTVSA  257 (361)
Q Consensus       250 ~vid~~g~  257 (361)
                      +++|++|-
T Consensus       117 ILVNNAGI  124 (300)
T KOG1201|consen  117 ILVNNAGI  124 (300)
T ss_pred             EEEecccc
Confidence            99999984

>PRK12550 shikimate 5-dehydrogenase; Reviewed

Probab=96.42  E-value=0.026  Score=50.73  Aligned_cols=77  Identities=17%  Similarity=0.248  Sum_probs=55.4

Q ss_pred             hhHhhhcCCCCCCCEEEEEcCChHHHHHHHHHHHcCC-eEEEEeCCchhHHHHHHHcCCCEEecCCCHHHHHHhcCCccE
Q 018067          172 YSPLRFYGLDKPGMHVGVVGLGGLGHVAVKFAKAMGV-KVTVISTSPSKKSEAIERLGADSFLVSRDQDEMQAAMGTMDG  250 (361)
Q Consensus       172 ~~~l~~~~~~~~g~~vlV~Gag~vG~~a~~la~~~g~-~vi~~~~~~~~~~~~~~~~g~~~vv~~~~~~~~~~~~~g~d~  250 (361)
                      +.+++... ...+++++|+|+|+.+.+++..+...|+ +++++.|+.++.+.+++.++...    .  +..  ....+|+
T Consensus       111 ~~~L~~~~-~~~~~~vlilGaGGaarAi~~aL~~~g~~~i~i~nR~~~~a~~la~~~~~~~----~--~~~--~~~~~dl  181 (272)
T PRK12550        111 AKLLASYQ-VPPDLVVALRGSGGMAKAVAAALRDAGFTDGTIVARNEKTGKALAELYGYEW----R--PDL--GGIEADI  181 (272)
T ss_pred             HHHHHhcC-CCCCCeEEEECCcHHHHHHHHHHHHCCCCEEEEEeCCHHHHHHHHHHhCCcc----h--hhc--ccccCCE
Confidence            33444433 3456789999999999999999999998 69999999988888877765321    1  111  1235899


Q ss_pred             EEEcCCC
Q 018067          251 IIDTVSA  257 (361)
Q Consensus       251 vid~~g~  257 (361)
                      +|+|+..
T Consensus       182 vINaTp~  188 (272)
T PRK12550        182 LVNVTPI  188 (272)
T ss_pred             EEECCcc
Confidence            9999753

>PRK06483 dihydromonapterin reductase; Provisional

Probab=96.42  E-value=0.022  Score=49.80  Aligned_cols=74  Identities=16%  Similarity=0.123  Sum_probs=51.6

Q ss_pred             CCEEEEEcC-ChHHHHHHHHHHHcCCeEEEEeCCchhHHHHHHHcCCCE-EecCCCHHHHHH----h---cCCccEEEEc
Q 018067          184 GMHVGVVGL-GGLGHVAVKFAKAMGVKVTVISTSPSKKSEAIERLGADS-FLVSRDQDEMQA----A---MGTMDGIIDT  254 (361)
Q Consensus       184 g~~vlV~Ga-g~vG~~a~~la~~~g~~vi~~~~~~~~~~~~~~~~g~~~-vv~~~~~~~~~~----~---~~g~d~vid~  254 (361)
                      ++++||.|+ |++|..+++.+...|++|+++++++++.....+..++.. ..|..+.+.+..    +   .+++|+++++
T Consensus         2 ~k~vlItGas~gIG~~ia~~l~~~G~~V~~~~r~~~~~~~~~~~~~~~~~~~D~~~~~~~~~~~~~~~~~~~~id~lv~~   81 (236)
T PRK06483          2 PAPILITGAGQRIGLALAWHLLAQGQPVIVSYRTHYPAIDGLRQAGAQCIQADFSTNAGIMAFIDELKQHTDGLRAIIHN   81 (236)
T ss_pred             CceEEEECCCChHHHHHHHHHHHCCCeEEEEeCCchhHHHHHHHcCCEEEEcCCCCHHHHHHHHHHHHhhCCCccEEEEC
Confidence            467999997 999999999999999999999987755433334455431 234444433222    2   2469999999


Q ss_pred             CCC
Q 018067          255 VSA  257 (361)
Q Consensus       255 ~g~  257 (361)
                      +|.
T Consensus        82 ag~   84 (236)
T PRK06483         82 ASD   84 (236)
T ss_pred             Ccc
Confidence            884

>PLN00203 glutamyl-tRNA reductase

Probab=96.41  E-value=0.015  Score=56.96  Aligned_cols=97  Identities=25%  Similarity=0.356  Sum_probs=66.1

Q ss_pred             CCEEEEEcCChHHHHHHHHHHHcCC-eEEEEeCCchhHHHHHHHcCCCEEecCCCHHHHHHhcCCccEEEEcCCCccc--
Q 018067          184 GMHVGVVGLGGLGHVAVKFAKAMGV-KVTVISTSPSKKSEAIERLGADSFLVSRDQDEMQAAMGTMDGIIDTVSAVHP--  260 (361)
Q Consensus       184 g~~vlV~Gag~vG~~a~~la~~~g~-~vi~~~~~~~~~~~~~~~~g~~~vv~~~~~~~~~~~~~g~d~vid~~g~~~~--  260 (361)
                      +.+|+|+|+|.+|.+++..+...|+ +|+++.++.++...+++.++...+ .....+.......++|+||.+++.+..  
T Consensus       266 ~kkVlVIGAG~mG~~~a~~L~~~G~~~V~V~nRs~era~~La~~~~g~~i-~~~~~~dl~~al~~aDVVIsAT~s~~pvI  344 (519)
T PLN00203        266 SARVLVIGAGKMGKLLVKHLVSKGCTKMVVVNRSEERVAALREEFPDVEI-IYKPLDEMLACAAEADVVFTSTSSETPLF  344 (519)
T ss_pred             CCEEEEEeCHHHHHHHHHHHHhCCCCeEEEEeCCHHHHHHHHHHhCCCce-EeecHhhHHHHHhcCCEEEEccCCCCCee
Confidence            6889999999999999999999997 799999998888888777742111 111222233445689999999877552  


Q ss_pred             HHHHHhcccc----CC---EEEEecCCC
Q 018067          261 LMPLIGLLKS----QG---KLVLVGAPE  281 (361)
Q Consensus       261 ~~~~~~~l~~----~G---~~v~~g~~~  281 (361)
                      ....++.+.+    ++   .+++++.+.
T Consensus       345 ~~e~l~~~~~~~~~~~~~~~~IDLAvPR  372 (519)
T PLN00203        345 LKEHVEALPPASDTVGGKRLFVDISVPR  372 (519)
T ss_pred             CHHHHHHhhhcccccCCCeEEEEeCCCC
Confidence            2233333321    12   477777653

>PRK09242 tropinone reductase; Provisional

Probab=96.40  E-value=0.018  Score=51.07  Aligned_cols=75  Identities=13%  Similarity=0.248  Sum_probs=54.1

Q ss_pred             CCCEEEEEcC-ChHHHHHHHHHHHcCCeEEEEeCCchhHHHHHHHc-----CCCE---EecCCCHHHHHH-------hcC
Q 018067          183 PGMHVGVVGL-GGLGHVAVKFAKAMGVKVTVISTSPSKKSEAIERL-----GADS---FLVSRDQDEMQA-------AMG  246 (361)
Q Consensus       183 ~g~~vlV~Ga-g~vG~~a~~la~~~g~~vi~~~~~~~~~~~~~~~~-----g~~~---vv~~~~~~~~~~-------~~~  246 (361)
                      .++++||.|+ |.+|..++..+...|++|++++++.++..++.+++     +.+.   ..|..+++.+..       ..+
T Consensus         8 ~~k~~lItGa~~gIG~~~a~~l~~~G~~v~~~~r~~~~~~~~~~~l~~~~~~~~~~~~~~Dl~~~~~~~~~~~~~~~~~g   87 (257)
T PRK09242          8 DGQTALITGASKGIGLAIAREFLGLGADVLIVARDADALAQARDELAEEFPEREVHGLAADVSDDEDRRAILDWVEDHWD   87 (257)
T ss_pred             CCCEEEEeCCCchHHHHHHHHHHHcCCEEEEEeCCHHHHHHHHHHHHhhCCCCeEEEEECCCCCHHHHHHHHHHHHHHcC
Confidence            4788999997 99999999999999999999999887766554443     2221   224445443322       224


Q ss_pred             CccEEEEcCCC
Q 018067          247 TMDGIIDTVSA  257 (361)
Q Consensus       247 g~d~vid~~g~  257 (361)
                      ++|++|.++|.
T Consensus        88 ~id~li~~ag~   98 (257)
T PRK09242         88 GLHILVNNAGG   98 (257)
T ss_pred             CCCEEEECCCC
Confidence            79999999985

>PRK07677 short chain dehydrogenase; Provisional

Probab=96.40  E-value=0.018  Score=51.02  Aligned_cols=74  Identities=20%  Similarity=0.311  Sum_probs=52.3

Q ss_pred             CCEEEEEcC-ChHHHHHHHHHHHcCCeEEEEeCCchhHHHHHHHc---CCC-EE--ecCCCHHHHHHh-------cCCcc
Q 018067          184 GMHVGVVGL-GGLGHVAVKFAKAMGVKVTVISTSPSKKSEAIERL---GAD-SF--LVSRDQDEMQAA-------MGTMD  249 (361)
Q Consensus       184 g~~vlV~Ga-g~vG~~a~~la~~~g~~vi~~~~~~~~~~~~~~~~---g~~-~v--v~~~~~~~~~~~-------~~g~d  249 (361)
                      |+++||.|+ |++|..+++.+...|++|++++++.++..++.+++   +.. ..  .|-.+++.+.++       .+++|
T Consensus         1 ~k~~lItG~s~giG~~ia~~l~~~G~~Vi~~~r~~~~~~~~~~~~~~~~~~~~~~~~D~~~~~~~~~~~~~~~~~~~~id   80 (252)
T PRK07677          1 EKVVIITGGSSGMGKAMAKRFAEEGANVVITGRTKEKLEEAKLEIEQFPGQVLTVQMDVRNPEDVQKMVEQIDEKFGRID   80 (252)
T ss_pred             CCEEEEeCCCChHHHHHHHHHHHCCCEEEEEeCCHHHHHHHHHHHHhcCCcEEEEEecCCCHHHHHHHHHHHHHHhCCcc
Confidence            468999987 99999999999999999999998877655554333   222 12  244455433332       24789


Q ss_pred             EEEEcCCC
Q 018067          250 GIIDTVSA  257 (361)
Q Consensus       250 ~vid~~g~  257 (361)
                      ++|+++|.
T Consensus        81 ~lI~~ag~   88 (252)
T PRK07677         81 ALINNAAG   88 (252)
T ss_pred             EEEECCCC
Confidence            99999874

>PRK08589 short chain dehydrogenase; Validated

Probab=96.39  E-value=0.023  Score=51.05  Aligned_cols=74  Identities=15%  Similarity=0.307  Sum_probs=52.1

Q ss_pred             CCCEEEEEcC-ChHHHHHHHHHHHcCCeEEEEeCCchhHHHHHHHc---CCC---EEecCCCHHHHHHh-------cCCc
Q 018067          183 PGMHVGVVGL-GGLGHVAVKFAKAMGVKVTVISTSPSKKSEAIERL---GAD---SFLVSRDQDEMQAA-------MGTM  248 (361)
Q Consensus       183 ~g~~vlV~Ga-g~vG~~a~~la~~~g~~vi~~~~~~~~~~~~~~~~---g~~---~vv~~~~~~~~~~~-------~~g~  248 (361)
                      +++++||.|+ +++|..++..+...|++|++++++ ++...+.+++   +.+   ...|..+++.+..+       .+++
T Consensus         5 ~~k~vlItGas~gIG~aia~~l~~~G~~vi~~~r~-~~~~~~~~~~~~~~~~~~~~~~Dl~~~~~~~~~~~~~~~~~g~i   83 (272)
T PRK08589          5 ENKVAVITGASTGIGQASAIALAQEGAYVLAVDIA-EAVSETVDKIKSNGGKAKAYHVDISDEQQVKDFASEIKEQFGRV   83 (272)
T ss_pred             CCCEEEEECCCchHHHHHHHHHHHCCCEEEEEeCc-HHHHHHHHHHHhcCCeEEEEEeecCCHHHHHHHHHHHHHHcCCc
Confidence            5788999998 999999999999999999999988 5554444433   322   22344554433322       2468


Q ss_pred             cEEEEcCCC
Q 018067          249 DGIIDTVSA  257 (361)
Q Consensus       249 d~vid~~g~  257 (361)
                      |++|+++|.
T Consensus        84 d~li~~Ag~   92 (272)
T PRK08589         84 DVLFNNAGV   92 (272)
T ss_pred             CEEEECCCC
Confidence            999999874

>PRK07985 oxidoreductase; Provisional

Probab=96.39  E-value=0.063  Score=48.91  Aligned_cols=98  Identities=15%  Similarity=0.098  Sum_probs=62.5

Q ss_pred             CCCEEEEEcC-ChHHHHHHHHHHHcCCeEEEEeCCc--hhHHHHH---HHcCCC---EEecCCCHHHHHHh-------cC
Q 018067          183 PGMHVGVVGL-GGLGHVAVKFAKAMGVKVTVISTSP--SKKSEAI---ERLGAD---SFLVSRDQDEMQAA-------MG  246 (361)
Q Consensus       183 ~g~~vlV~Ga-g~vG~~a~~la~~~g~~vi~~~~~~--~~~~~~~---~~~g~~---~vv~~~~~~~~~~~-------~~  246 (361)
                      .++++||.|+ |++|.++++.+...|++|+++.++.  +..+.+.   ++.+..   ...|..+.+.+.++       .+
T Consensus        48 ~~k~vlITGas~gIG~aia~~L~~~G~~Vi~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~Dl~~~~~~~~~~~~~~~~~g  127 (294)
T PRK07985         48 KDRKALVTGGDSGIGRAAAIAYAREGADVAISYLPVEEEDAQDVKKIIEECGRKAVLLPGDLSDEKFARSLVHEAHKALG  127 (294)
T ss_pred             CCCEEEEECCCCcHHHHHHHHHHHCCCEEEEecCCcchhhHHHHHHHHHHcCCeEEEEEccCCCHHHHHHHHHHHHHHhC
Confidence            5678999998 9999999999999999998876543  2222232   233432   12345554433322       24


Q ss_pred             CccEEEEcCCCcc--------------------------cHHHHHhccccCCEEEEecCC
Q 018067          247 TMDGIIDTVSAVH--------------------------PLMPLIGLLKSQGKLVLVGAP  280 (361)
Q Consensus       247 g~d~vid~~g~~~--------------------------~~~~~~~~l~~~G~~v~~g~~  280 (361)
                      ++|++++++|...                          .++.++..++.+|+++.++..
T Consensus       128 ~id~lv~~Ag~~~~~~~~~~~~~~~~~~~~~~N~~g~~~l~~~~~~~m~~~g~iv~iSS~  187 (294)
T PRK07985        128 GLDIMALVAGKQVAIPDIADLTSEQFQKTFAINVFALFWLTQEAIPLLPKGASIITTSSI  187 (294)
T ss_pred             CCCEEEECCCCCcCCCChhhCCHHHHHHHHHHHhHHHHHHHHHHHHhhhcCCEEEEECCc
Confidence            7899999987420                          122344455678999998764

>PRK08862 short chain dehydrogenase; Provisional

Probab=96.38  E-value=0.03  Score=48.94  Aligned_cols=75  Identities=12%  Similarity=0.164  Sum_probs=53.5

Q ss_pred             CCCEEEEEcC-ChHHHHHHHHHHHcCCeEEEEeCCchhHHHHHHH---cCCCE---EecCCCHHHHHHh-------cC-C
Q 018067          183 PGMHVGVVGL-GGLGHVAVKFAKAMGVKVTVISTSPSKKSEAIER---LGADS---FLVSRDQDEMQAA-------MG-T  247 (361)
Q Consensus       183 ~g~~vlV~Ga-g~vG~~a~~la~~~g~~vi~~~~~~~~~~~~~~~---~g~~~---vv~~~~~~~~~~~-------~~-g  247 (361)
                      .|++++|.|+ +++|.+.+..+...|++|+++.++.++.+.+.++   .+.+.   ..|..+++.+..+       .+ .
T Consensus         4 ~~k~~lVtGas~GIG~aia~~la~~G~~V~~~~r~~~~l~~~~~~i~~~~~~~~~~~~D~~~~~~~~~~~~~~~~~~g~~   83 (227)
T PRK08862          4 KSSIILITSAGSVLGRTISCHFARLGATLILCDQDQSALKDTYEQCSALTDNVYSFQLKDFSQESIRHLFDAIEQQFNRA   83 (227)
T ss_pred             CCeEEEEECCccHHHHHHHHHHHHCCCEEEEEcCCHHHHHHHHHHHHhcCCCeEEEEccCCCHHHHHHHHHHHHHHhCCC
Confidence            4688999997 8999999999999999999999988776555443   34321   2344454433322       24 6


Q ss_pred             ccEEEEcCCC
Q 018067          248 MDGIIDTVSA  257 (361)
Q Consensus       248 ~d~vid~~g~  257 (361)
                      +|++|+++|.
T Consensus        84 iD~li~nag~   93 (227)
T PRK08862         84 PDVLVNNWTS   93 (227)
T ss_pred             CCEEEECCcc
Confidence            9999999973

>TIGR02469 CbiT precorrin-6Y C5,15-methyltransferase (decarboxylating), CbiT subunit

Probab=96.38  E-value=0.058  Score=41.76  Aligned_cols=98  Identities=18%  Similarity=0.267  Sum_probs=63.7

Q ss_pred             CCCCCCEEEEEcCChHHHHHHHHHHHcC-CeEEEEeCCchhHHHHH---HHcCCC--EEecCCCHHHHHHhcCCccEEEE
Q 018067          180 LDKPGMHVGVVGLGGLGHVAVKFAKAMG-VKVTVISTSPSKKSEAI---ERLGAD--SFLVSRDQDEMQAAMGTMDGIID  253 (361)
Q Consensus       180 ~~~~g~~vlV~Gag~vG~~a~~la~~~g-~~vi~~~~~~~~~~~~~---~~~g~~--~vv~~~~~~~~~~~~~g~d~vid  253 (361)
                      .+.++++|+-+|+|. |..+..+++..+ .+++.++.++...+.+.   +.++..  .++..+-.+........+|+|+-
T Consensus        16 ~~~~~~~vldlG~G~-G~~~~~l~~~~~~~~v~~vD~s~~~~~~a~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~D~v~~   94 (124)
T TIGR02469        16 RLRPGDVLWDIGAGS-GSITIEAARLVPNGRVYAIERNPEALRLIERNARRFGVSNIVIVEGDAPEALEDSLPEPDRVFI   94 (124)
T ss_pred             CCCCCCEEEEeCCCC-CHHHHHHHHHCCCceEEEEcCCHHHHHHHHHHHHHhCCCceEEEeccccccChhhcCCCCEEEE
Confidence            356788888899976 888899998874 58999988876554432   334432  22221111111222357999987


Q ss_pred             cCCCc---ccHHHHHhccccCCEEEEec
Q 018067          254 TVSAV---HPLMPLIGLLKSQGKLVLVG  278 (361)
Q Consensus       254 ~~g~~---~~~~~~~~~l~~~G~~v~~g  278 (361)
                      ..+..   ..++.+.+.|+++|.++...
T Consensus        95 ~~~~~~~~~~l~~~~~~Lk~gG~li~~~  122 (124)
T TIGR02469        95 GGSGGLLQEILEAIWRRLRPGGRIVLNA  122 (124)
T ss_pred             CCcchhHHHHHHHHHHHcCCCCEEEEEe
Confidence            54332   24778999999999998753

This model recognizes the CbiT methylase which is responsible, in part (along with CbiE), for methylating precorrin-6y (or cobalt-precorrin-6y) at both the 5 and 15 positions as well as the concomitant decarbozylation at C-12. In many organisms, this protein is fused to the CbiE subunit. The fused protein, when found in organisms catalyzing the oxidative version of the cobalamin biosynthesis pathway, is called CobL.

>PRK14188 bifunctional 5,10-methylene-tetrahydrofolate dehydrogenase/ 5,10-methylene-tetrahydrofolate cyclohydrolase; Provisional

Probab=96.36  E-value=0.032  Score=50.51  Aligned_cols=96  Identities=19%  Similarity=0.210  Sum_probs=72.3

Q ss_pred             cccchhhhhhhhHhhhcCCCCCCCEEEEEc-CChHHHHHHHHHHHcCCeEEEEeCCchhHHHHHHHcCCCEEecCCCHHH
Q 018067          162 APLLCAGITVYSPLRFYGLDKPGMHVGVVG-LGGLGHVAVKFAKAMGVKVTVISTSPSKKSEAIERLGADSFLVSRDQDE  240 (361)
Q Consensus       162 a~l~~~~~ta~~~l~~~~~~~~g~~vlV~G-ag~vG~~a~~la~~~g~~vi~~~~~~~~~~~~~~~~g~~~vv~~~~~~~  240 (361)
                      ..+||+..+.+..++...---.|++|+|+| .+.+|.-.+.++...|+.|++..+....                     
T Consensus       136 ~~~PcTp~ai~~ll~~~~i~~~Gk~V~viGrs~~mG~PmA~~L~~~g~tVtv~~~rT~~---------------------  194 (296)
T PRK14188        136 ALVPCTPLGCMMLLRRVHGDLSGLNAVVIGRSNLVGKPMAQLLLAANATVTIAHSRTRD---------------------  194 (296)
T ss_pred             CCcCCCHHHHHHHHHHhCCCCCCCEEEEEcCCcchHHHHHHHHHhCCCEEEEECCCCCC---------------------
Confidence            356777777777777765446899999999 5999999999999999999887422211                     


Q ss_pred             HHHhcCCccEEEEcCCCcccHHHHHhccccCCEEEEecCC
Q 018067          241 MQAAMGTMDGIIDTVSAVHPLMPLIGLLKSQGKLVLVGAP  280 (361)
Q Consensus       241 ~~~~~~g~d~vid~~g~~~~~~~~~~~l~~~G~~v~~g~~  280 (361)
                      +.+....+|+|+-++|.+..+...  .+++|..++.+|..
T Consensus       195 l~e~~~~ADIVIsavg~~~~v~~~--~lk~GavVIDvGin  232 (296)
T PRK14188        195 LPAVCRRADILVAAVGRPEMVKGD--WIKPGATVIDVGIN  232 (296)
T ss_pred             HHHHHhcCCEEEEecCChhhcchh--eecCCCEEEEcCCc
Confidence            123334689999999998755443  38999999999864

>PRK12747 short chain dehydrogenase; Provisional

Probab=96.35  E-value=0.04  Score=48.76  Aligned_cols=99  Identities=14%  Similarity=0.212  Sum_probs=61.1

Q ss_pred             CCCEEEEEcC-ChHHHHHHHHHHHcCCeEEEEe-CCchhHHHHHHHc---CCCE---EecCCCHHHH----HHh------
Q 018067          183 PGMHVGVVGL-GGLGHVAVKFAKAMGVKVTVIS-TSPSKKSEAIERL---GADS---FLVSRDQDEM----QAA------  244 (361)
Q Consensus       183 ~g~~vlV~Ga-g~vG~~a~~la~~~g~~vi~~~-~~~~~~~~~~~~~---g~~~---vv~~~~~~~~----~~~------  244 (361)
                      .++++||.|+ |++|.++++.+...|++|++.. +..++......++   +...   ..|..+.+.+    .++      
T Consensus         3 ~~k~~lItGas~gIG~~ia~~l~~~G~~v~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~D~~~~~~~~~~~~~~~~~~~~   82 (252)
T PRK12747          3 KGKVALVTGASRGIGRAIAKRLANDGALVAIHYGNRKEEAEETVYEIQSNGGSAFSIGANLESLHGVEALYSSLDNELQN   82 (252)
T ss_pred             CCCEEEEeCCCChHHHHHHHHHHHCCCeEEEEcCCCHHHHHHHHHHHHhcCCceEEEecccCCHHHHHHHHHHHHHHhhh
Confidence            4678999997 9999999999999999998865 3444433333322   3221   1233332211    111      


Q ss_pred             -cC--CccEEEEcCCCcc-------------------------cHHHHHhccccCCEEEEecCCC
Q 018067          245 -MG--TMDGIIDTVSAVH-------------------------PLMPLIGLLKSQGKLVLVGAPE  281 (361)
Q Consensus       245 -~~--g~d~vid~~g~~~-------------------------~~~~~~~~l~~~G~~v~~g~~~  281 (361)
                       .+  ++|++++++|...                         ..+.++..+++.|+++.+++..
T Consensus        83 ~~g~~~id~lv~~Ag~~~~~~~~~~~~~~~~~~~~vN~~~~~~l~~~~~~~~~~~g~iv~isS~~  147 (252)
T PRK12747         83 RTGSTKFDILINNAGIGPGAFIEETTEQFFDRMVSVNAKAPFFIIQQALSRLRDNSRIINISSAA  147 (252)
T ss_pred             hcCCCCCCEEEECCCcCCCCCcccCCHHHHHHHHHHhhhHHHHHHHHHHHHhhcCCeEEEECCcc
Confidence             12  6999999988421                         1123455566779999998653

>PRK07024 short chain dehydrogenase; Provisional

Probab=96.35  E-value=0.023  Score=50.46  Aligned_cols=74  Identities=20%  Similarity=0.256  Sum_probs=53.2

Q ss_pred             CCEEEEEcC-ChHHHHHHHHHHHcCCeEEEEeCCchhHHHHHHHcCC--C---EEecCCCHHHHHHh-------cCCccE
Q 018067          184 GMHVGVVGL-GGLGHVAVKFAKAMGVKVTVISTSPSKKSEAIERLGA--D---SFLVSRDQDEMQAA-------MGTMDG  250 (361)
Q Consensus       184 g~~vlV~Ga-g~vG~~a~~la~~~g~~vi~~~~~~~~~~~~~~~~g~--~---~vv~~~~~~~~~~~-------~~g~d~  250 (361)
                      +.+++|.|+ |++|...+..+...|++|++++++.++..++.+++..  +   ...|..+++.+.++       .+.+|+
T Consensus         2 ~~~vlItGas~gIG~~la~~l~~~G~~v~~~~r~~~~~~~~~~~~~~~~~~~~~~~Dl~~~~~i~~~~~~~~~~~g~id~   81 (257)
T PRK07024          2 PLKVFITGASSGIGQALAREYARQGATLGLVARRTDALQAFAARLPKAARVSVYAADVRDADALAAAAADFIAAHGLPDV   81 (257)
T ss_pred             CCEEEEEcCCcHHHHHHHHHHHHCCCEEEEEeCCHHHHHHHHHhcccCCeeEEEEcCCCCHHHHHHHHHHHHHhCCCCCE
Confidence            468999987 9999999999998999999999988776666554432  1   12344554443332       235899


Q ss_pred             EEEcCCC
Q 018067          251 IIDTVSA  257 (361)
Q Consensus       251 vid~~g~  257 (361)
                      +|+++|.
T Consensus        82 lv~~ag~   88 (257)
T PRK07024         82 VIANAGI   88 (257)
T ss_pred             EEECCCc
Confidence            9999874

>PRK08643 acetoin reductase; Validated

Probab=96.34  E-value=0.025  Score=50.15  Aligned_cols=74  Identities=22%  Similarity=0.344  Sum_probs=52.4

Q ss_pred             CCEEEEEcC-ChHHHHHHHHHHHcCCeEEEEeCCchhHHHHHHHc---CCCE---EecCCCHHHHHHh-------cCCcc
Q 018067          184 GMHVGVVGL-GGLGHVAVKFAKAMGVKVTVISTSPSKKSEAIERL---GADS---FLVSRDQDEMQAA-------MGTMD  249 (361)
Q Consensus       184 g~~vlV~Ga-g~vG~~a~~la~~~g~~vi~~~~~~~~~~~~~~~~---g~~~---vv~~~~~~~~~~~-------~~g~d  249 (361)
                      ++++||.|+ |.+|...++.+...|++|++++++.++...+.+++   +...   ..|..+++.+.++       .+++|
T Consensus         2 ~k~~lItGas~giG~~la~~l~~~G~~v~~~~r~~~~~~~~~~~~~~~~~~~~~~~~Dl~~~~~~~~~~~~~~~~~~~id   81 (256)
T PRK08643          2 SKVALVTGAGQGIGFAIAKRLVEDGFKVAIVDYNEETAQAAADKLSKDGGKAIAVKADVSDRDQVFAAVRQVVDTFGDLN   81 (256)
T ss_pred             CCEEEEECCCChHHHHHHHHHHHCCCEEEEEeCCHHHHHHHHHHHHhcCCeEEEEECCCCCHHHHHHHHHHHHHHcCCCC
Confidence            568999997 99999999999999999999998876655554433   2221   2244555433322       24799


Q ss_pred             EEEEcCCC
Q 018067          250 GIIDTVSA  257 (361)
Q Consensus       250 ~vid~~g~  257 (361)
                      ++|.++|.
T Consensus        82 ~vi~~ag~   89 (256)
T PRK08643         82 VVVNNAGV   89 (256)
T ss_pred             EEEECCCC
Confidence            99999874

>COG1648 CysG Siroheme synthase (precorrin-2 oxidase/ferrochelatase domain) [Coenzyme metabolism]

Probab=96.33  E-value=0.064  Score=46.14  Aligned_cols=118  Identities=17%  Similarity=0.037  Sum_probs=76.3

Q ss_pred             CCCCEEEEEcCChHHHHHHHHHHHcCCeEEEEeCCc-hhHHHHHHHcCCCEEecCCCHHHHHHhcCCccEEEEcCCCccc
Q 018067          182 KPGMHVGVVGLGGLGHVAVKFAKAMGVKVTVISTSP-SKKSEAIERLGADSFLVSRDQDEMQAAMGTMDGIIDTVSAVHP  260 (361)
Q Consensus       182 ~~g~~vlV~Gag~vG~~a~~la~~~g~~vi~~~~~~-~~~~~~~~~~g~~~vv~~~~~~~~~~~~~g~d~vid~~g~~~~  260 (361)
                      -.|++|||+|+|.+|.-=+.++...|++|+++.... ++...+++..+...+ . +  ..-.....++++||-+++++..
T Consensus        10 l~~k~VlvvGgG~va~rKa~~ll~~ga~v~Vvs~~~~~el~~~~~~~~i~~~-~-~--~~~~~~~~~~~lviaAt~d~~l   85 (210)
T COG1648          10 LEGKKVLVVGGGSVALRKARLLLKAGADVTVVSPEFEPELKALIEEGKIKWI-E-R--EFDAEDLDDAFLVIAATDDEEL   85 (210)
T ss_pred             cCCCEEEEECCCHHHHHHHHHHHhcCCEEEEEcCCccHHHHHHHHhcCcchh-h-c--ccChhhhcCceEEEEeCCCHHH
Confidence            367899999999999999999999999999888766 455555444442211 1 1  1111122249999999999884


Q ss_pred             HHHHHhccccCCEEEEecCCCCCcccCh-HHHHhCCcEEEeccc
Q 018067          261 LMPLIGLLKSQGKLVLVGAPEKPLELPA-FSLLMGRKIVGGSMI  303 (361)
Q Consensus       261 ~~~~~~~l~~~G~~v~~g~~~~~~~~~~-~~~~~~~~~i~g~~~  303 (361)
                      -+...+..++.+.++.+...+....+.. ..+-.+.++|.=+..
T Consensus        86 n~~i~~~a~~~~i~vNv~D~p~~~~f~~Pa~~~r~~l~iaIsT~  129 (210)
T COG1648          86 NERIAKAARERRILVNVVDDPELCDFIFPAIVDRGPLQIAISTG  129 (210)
T ss_pred             HHHHHHHHHHhCCceeccCCcccCceecceeeccCCeEEEEECC
Confidence            4466667778899998876554322222 223335566544433

>PRK05875 short chain dehydrogenase; Provisional

Probab=96.32  E-value=0.028  Score=50.53  Aligned_cols=75  Identities=21%  Similarity=0.345  Sum_probs=52.2

Q ss_pred             CCCEEEEEcC-ChHHHHHHHHHHHcCCeEEEEeCCchhHHHHHHHcC-----CC-EE--ecCCCHHHHHHh-------cC
Q 018067          183 PGMHVGVVGL-GGLGHVAVKFAKAMGVKVTVISTSPSKKSEAIERLG-----AD-SF--LVSRDQDEMQAA-------MG  246 (361)
Q Consensus       183 ~g~~vlV~Ga-g~vG~~a~~la~~~g~~vi~~~~~~~~~~~~~~~~g-----~~-~v--v~~~~~~~~~~~-------~~  246 (361)
                      +++++||.|+ |.+|..+++.+...|++|++++++.++.....+++.     .. .+  .|..+++.+...       .+
T Consensus         6 ~~k~vlItGasg~IG~~la~~l~~~G~~V~~~~r~~~~~~~~~~~l~~~~~~~~~~~~~~Dl~~~~~~~~~~~~~~~~~~   85 (276)
T PRK05875          6 QDRTYLVTGGGSGIGKGVAAGLVAAGAAVMIVGRNPDKLAAAAEEIEALKGAGAVRYEPADVTDEDQVARAVDAATAWHG   85 (276)
T ss_pred             CCCEEEEECCCcHHHHHHHHHHHHCCCeEEEEeCCHHHHHHHHHHHHhccCCCceEEEEcCCCCHHHHHHHHHHHHHHcC
Confidence            4678999998 999999999999999999999988766544433321     11 12  244454433322       23


Q ss_pred             CccEEEEcCCC
Q 018067          247 TMDGIIDTVSA  257 (361)
Q Consensus       247 g~d~vid~~g~  257 (361)
                      ++|++|.++|.
T Consensus        86 ~~d~li~~ag~   96 (276)
T PRK05875         86 RLHGVVHCAGG   96 (276)
T ss_pred             CCCEEEECCCc
Confidence            78999999874

>COG0334 GdhA Glutamate dehydrogenase/leucine dehydrogenase [Amino acid transport and metabolism]

Probab=96.32  E-value=0.058  Score=50.51  Aligned_cols=134  Identities=16%  Similarity=0.186  Sum_probs=84.0

Q ss_pred             cccccccchhhhhhhhHhhhcCCCCCCCEEEEEcCChHHHHHHHHHHHcCCeEEEEeCCch------------------h
Q 018067          158 LDATAPLLCAGITVYSPLRFYGLDKPGMHVGVVGLGGLGHVAVKFAKAMGVKVTVISTSPS------------------K  219 (361)
Q Consensus       158 ~~~aa~l~~~~~ta~~~l~~~~~~~~g~~vlV~Gag~vG~~a~~la~~~g~~vi~~~~~~~------------------~  219 (361)
                      ..+|....+.+.+- .+++....--+|.+|.|.|.|.+|+.+++.+...|++|++++++..                  +
T Consensus       182 r~~aTg~Gv~~~~~-~a~~~~g~~l~G~rVaVQG~GNVg~~aa~~l~~~GAkvva~sds~g~i~~~~Gld~~~l~~~~~~  260 (411)
T COG0334         182 RSEATGYGVFYAIR-EALKALGDDLEGARVAVQGFGNVGQYAAEKLHELGAKVVAVSDSKGGIYDEDGLDVEALLELKER  260 (411)
T ss_pred             CCcccceehHHHHH-HHHHHcCCCcCCCEEEEECccHHHHHHHHHHHHcCCEEEEEEcCCCceecCCCCCHHHHHHHhhh
Confidence            34455555544443 5555555324899999999999999999999999999999998876                  4


Q ss_pred             HHHHHHHcCCCEEecCCC--------------HHHHHHhc---CCccEEEEcCCCcccHHHHHhccccCCEEEEecCC--
Q 018067          220 KSEAIERLGADSFLVSRD--------------QDEMQAAM---GTMDGIIDTVSAVHPLMPLIGLLKSQGKLVLVGAP--  280 (361)
Q Consensus       220 ~~~~~~~~g~~~vv~~~~--------------~~~~~~~~---~g~d~vid~~g~~~~~~~~~~~l~~~G~~v~~g~~--  280 (361)
                      +..+.+.+|++.+-+ ..              ++.+...+   -.+++|.+.+.++. -..+-+.+...|.++.....  
T Consensus       261 ~~~v~~~~ga~~i~~-~e~~~~~cDIl~PcA~~n~I~~~na~~l~ak~V~EgAN~P~-t~eA~~i~~erGIl~~PD~laN  338 (411)
T COG0334         261 RGSVAEYAGAEYITN-EELLEVDCDILIPCALENVITEDNADQLKAKIVVEGANGPT-TPEADEILLERGILVVPDILAN  338 (411)
T ss_pred             hhhHHhhcCceEccc-cccccccCcEEcccccccccchhhHHHhhhcEEEeccCCCC-CHHHHHHHHHCCCEEcChhhcc
Confidence            455555555433211 11              00010000   04678888888887 46666677677765544432  


Q ss_pred             CCCcccChHHHHhC
Q 018067          281 EKPLELPAFSLLMG  294 (361)
Q Consensus       281 ~~~~~~~~~~~~~~  294 (361)
                      .+.+..+.+++..+
T Consensus       339 AGGV~vS~~E~~qn  352 (411)
T COG0334         339 AGGVIVSYLEWVQN  352 (411)
T ss_pred             CcCeeeehHHHHhh
Confidence            34566666665443

>PRK07067 sorbitol dehydrogenase; Provisional

Probab=96.31  E-value=0.031  Score=49.60  Aligned_cols=75  Identities=20%  Similarity=0.324  Sum_probs=54.8

Q ss_pred             CCCEEEEEcC-ChHHHHHHHHHHHcCCeEEEEeCCchhHHHHHHHcCCCE---EecCCCHHHHHHh-------cCCccEE
Q 018067          183 PGMHVGVVGL-GGLGHVAVKFAKAMGVKVTVISTSPSKKSEAIERLGADS---FLVSRDQDEMQAA-------MGTMDGI  251 (361)
Q Consensus       183 ~g~~vlV~Ga-g~vG~~a~~la~~~g~~vi~~~~~~~~~~~~~~~~g~~~---vv~~~~~~~~~~~-------~~g~d~v  251 (361)
                      .++++||.|+ |.+|...+..+...|++|++++++.++...+.++++...   ..|-.+++.+..+       .+++|++
T Consensus         5 ~~~~vlItGas~~iG~~ia~~l~~~G~~v~~~~r~~~~~~~~~~~~~~~~~~~~~D~~~~~~~~~~~~~~~~~~~~id~l   84 (257)
T PRK07067          5 QGKVALLTGAASGIGEAVAERYLAEGARVVIADIKPARARLAALEIGPAAIAVSLDVTRQDSIDRIVAAAVERFGGIDIL   84 (257)
T ss_pred             CCCEEEEeCCCchHHHHHHHHHHHcCCEEEEEcCCHHHHHHHHHHhCCceEEEEccCCCHHHHHHHHHHHHHHcCCCCEE
Confidence            4678999997 999999999999999999999999887777666655321   2244444433322       2479999


Q ss_pred             EEcCCC
Q 018067          252 IDTVSA  257 (361)
Q Consensus       252 id~~g~  257 (361)
                      |.++|.
T Consensus        85 i~~ag~   90 (257)
T PRK07067         85 FNNAAL   90 (257)
T ss_pred             EECCCc
Confidence            999874

>PRK07666 fabG 3-ketoacyl-(acyl-carrier-protein) reductase; Provisional

Probab=96.29  E-value=0.022  Score=49.98  Aligned_cols=75  Identities=21%  Similarity=0.352  Sum_probs=52.1

Q ss_pred             CCCEEEEEcC-ChHHHHHHHHHHHcCCeEEEEeCCchhHHHHHHHc---CCCE---EecCCCHHHHHHh-------cCCc
Q 018067          183 PGMHVGVVGL-GGLGHVAVKFAKAMGVKVTVISTSPSKKSEAIERL---GADS---FLVSRDQDEMQAA-------MGTM  248 (361)
Q Consensus       183 ~g~~vlV~Ga-g~vG~~a~~la~~~g~~vi~~~~~~~~~~~~~~~~---g~~~---vv~~~~~~~~~~~-------~~g~  248 (361)
                      .+.+++|.|+ |.+|..++..+...|++|++++++.++..++.+++   +...   ..|..+++.+..+       .+++
T Consensus         6 ~~~~vlVtG~sg~iG~~l~~~L~~~G~~Vi~~~r~~~~~~~~~~~~~~~~~~~~~~~~D~~~~~~~~~~~~~~~~~~~~i   85 (239)
T PRK07666          6 QGKNALITGAGRGIGRAVAIALAKEGVNVGLLARTEENLKAVAEEVEAYGVKVVIATADVSDYEEVTAAIEQLKNELGSI   85 (239)
T ss_pred             CCCEEEEEcCCchHHHHHHHHHHHCCCEEEEEeCCHHHHHHHHHHHHHhCCeEEEEECCCCCHHHHHHHHHHHHHHcCCc
Confidence            3578999997 99999999998889999999999877655543333   2221   2244444433322       2479


Q ss_pred             cEEEEcCCC
Q 018067          249 DGIIDTVSA  257 (361)
Q Consensus       249 d~vid~~g~  257 (361)
                      |++|.++|.
T Consensus        86 d~vi~~ag~   94 (239)
T PRK07666         86 DILINNAGI   94 (239)
T ss_pred             cEEEEcCcc
Confidence            999999875

>PRK06101 short chain dehydrogenase; Provisional

Probab=96.29  E-value=0.053  Score=47.62  Aligned_cols=73  Identities=16%  Similarity=0.033  Sum_probs=50.5

Q ss_pred             CEEEEEcC-ChHHHHHHHHHHHcCCeEEEEeCCchhHHHHHHHcC-CC-EEecCCCHHHHHHhc----CCccEEEEcCCC
Q 018067          185 MHVGVVGL-GGLGHVAVKFAKAMGVKVTVISTSPSKKSEAIERLG-AD-SFLVSRDQDEMQAAM----GTMDGIIDTVSA  257 (361)
Q Consensus       185 ~~vlV~Ga-g~vG~~a~~la~~~g~~vi~~~~~~~~~~~~~~~~g-~~-~vv~~~~~~~~~~~~----~g~d~vid~~g~  257 (361)
                      .+++|.|+ |++|...+..+...|++|+++++++++..++.+... .. ...|..+.+.+.++.    ...|.++.++|.
T Consensus         2 ~~vlItGas~giG~~la~~L~~~G~~V~~~~r~~~~~~~~~~~~~~~~~~~~D~~~~~~~~~~~~~~~~~~d~~i~~ag~   81 (240)
T PRK06101          2 TAVLITGATSGIGKQLALDYAKQGWQVIACGRNQSVLDELHTQSANIFTLAFDVTDHPGTKAALSQLPFIPELWIFNAGD   81 (240)
T ss_pred             cEEEEEcCCcHHHHHHHHHHHhCCCEEEEEECCHHHHHHHHHhcCCCeEEEeeCCCHHHHHHHHHhcccCCCEEEEcCcc
Confidence            46899987 999999998888899999999998877666644322 11 233555555444432    246777777763

>PRK06138 short chain dehydrogenase; Provisional

Probab=96.29  E-value=0.021  Score=50.43  Aligned_cols=75  Identities=17%  Similarity=0.265  Sum_probs=53.2

Q ss_pred             CCCEEEEEcC-ChHHHHHHHHHHHcCCeEEEEeCCchhHHHHHHHc--CCC-E--EecCCCHHHHHHh-------cCCcc
Q 018067          183 PGMHVGVVGL-GGLGHVAVKFAKAMGVKVTVISTSPSKKSEAIERL--GAD-S--FLVSRDQDEMQAA-------MGTMD  249 (361)
Q Consensus       183 ~g~~vlV~Ga-g~vG~~a~~la~~~g~~vi~~~~~~~~~~~~~~~~--g~~-~--vv~~~~~~~~~~~-------~~g~d  249 (361)
                      ++.+++|.|+ |.+|...++.+...|++|+++.++.++.....+.+  +.. .  ..|..+++.+.++       .+++|
T Consensus         4 ~~k~~lItG~sg~iG~~la~~l~~~G~~v~~~~r~~~~~~~~~~~~~~~~~~~~~~~D~~~~~~~~~~~~~i~~~~~~id   83 (252)
T PRK06138          4 AGRVAIVTGAGSGIGRATAKLFAREGARVVVADRDAEAAERVAAAIAAGGRAFARQGDVGSAEAVEALVDFVAARWGRLD   83 (252)
T ss_pred             CCcEEEEeCCCchHHHHHHHHHHHCCCeEEEecCCHHHHHHHHHHHhcCCeEEEEEcCCCCHHHHHHHHHHHHHHcCCCC
Confidence            4678999998 99999999988888999999999877655544433  322 1  2244555444332       24799


Q ss_pred             EEEEcCCC
Q 018067          250 GIIDTVSA  257 (361)
Q Consensus       250 ~vid~~g~  257 (361)
                      ++|.++|.
T Consensus        84 ~vi~~ag~   91 (252)
T PRK06138         84 VLVNNAGF   91 (252)
T ss_pred             EEEECCCC
Confidence            99999985

>PRK13942 protein-L-isoaspartate O-methyltransferase; Provisional

Probab=96.29  E-value=0.04  Score=47.61  Aligned_cols=98  Identities=30%  Similarity=0.311  Sum_probs=63.6

Q ss_pred             cCCCCCCCEEEEEcCChHHHHHHHHHHHcC--CeEEEEeCCchhHHHHHH---HcCCCE--EecCCCHHHHHHhcCCccE
Q 018067          178 YGLDKPGMHVGVVGLGGLGHVAVKFAKAMG--VKVTVISTSPSKKSEAIE---RLGADS--FLVSRDQDEMQAAMGTMDG  250 (361)
Q Consensus       178 ~~~~~~g~~vlV~Gag~vG~~a~~la~~~g--~~vi~~~~~~~~~~~~~~---~~g~~~--vv~~~~~~~~~~~~~g~d~  250 (361)
                      ...+++|++||-+|+|. |..++.+++..+  .+|+.++.+++-...+.+   ..|...  ++..+..+.. .....+|.
T Consensus        71 ~l~~~~g~~VLdIG~Gs-G~~t~~la~~~~~~~~V~~vE~~~~~~~~a~~~l~~~g~~~v~~~~gd~~~~~-~~~~~fD~  148 (212)
T PRK13942         71 LLDLKEGMKVLEIGTGS-GYHAAVVAEIVGKSGKVVTIERIPELAEKAKKTLKKLGYDNVEVIVGDGTLGY-EENAPYDR  148 (212)
T ss_pred             HcCCCCcCEEEEECCcc-cHHHHHHHHhcCCCCEEEEEeCCHHHHHHHHHHHHHcCCCCeEEEECCcccCC-CcCCCcCE
Confidence            34578999999999864 777777887765  589999888765443322   334321  2211111110 11246999


Q ss_pred             EEEcCCCcccHHHHHhccccCCEEEEe
Q 018067          251 IIDTVSAVHPLMPLIGLLKSQGKLVLV  277 (361)
Q Consensus       251 vid~~g~~~~~~~~~~~l~~~G~~v~~  277 (361)
                      |+-...........++.|+++|+++..
T Consensus       149 I~~~~~~~~~~~~l~~~LkpgG~lvi~  175 (212)
T PRK13942        149 IYVTAAGPDIPKPLIEQLKDGGIMVIP  175 (212)
T ss_pred             EEECCCcccchHHHHHhhCCCcEEEEE
Confidence            976655556577889999999998875

>PRK07774 short chain dehydrogenase; Provisional

Probab=96.28  E-value=0.024  Score=50.02  Aligned_cols=75  Identities=19%  Similarity=0.301  Sum_probs=52.4

Q ss_pred             CCCEEEEEcC-ChHHHHHHHHHHHcCCeEEEEeCCchhHHHHHHHc---CCC---EEecCCCHHHHHHh-------cCCc
Q 018067          183 PGMHVGVVGL-GGLGHVAVKFAKAMGVKVTVISTSPSKKSEAIERL---GAD---SFLVSRDQDEMQAA-------MGTM  248 (361)
Q Consensus       183 ~g~~vlV~Ga-g~vG~~a~~la~~~g~~vi~~~~~~~~~~~~~~~~---g~~---~vv~~~~~~~~~~~-------~~g~  248 (361)
                      .+.+++|.|+ |.+|...++.+...|++|++++++++....+.+++   +..   ...|..+.+.+..+       .+++
T Consensus         5 ~~k~vlItGasg~iG~~la~~l~~~g~~vi~~~r~~~~~~~~~~~~~~~~~~~~~~~~Dl~~~~~~~~~~~~~~~~~~~i   84 (250)
T PRK07774          5 DDKVAIVTGAAGGIGQAYAEALAREGASVVVADINAEGAERVAKQIVADGGTAIAVQVDVSDPDSAKAMADATVSAFGGI   84 (250)
T ss_pred             CCCEEEEECCCchHHHHHHHHHHHCCCEEEEEeCCHHHHHHHHHHHHhcCCcEEEEEcCCCCHHHHHHHHHHHHHHhCCC
Confidence            4678999998 99999999999889999999999876554443332   221   12344554433222       2469


Q ss_pred             cEEEEcCCC
Q 018067          249 DGIIDTVSA  257 (361)
Q Consensus       249 d~vid~~g~  257 (361)
                      |++|.++|.
T Consensus        85 d~vi~~ag~   93 (250)
T PRK07774         85 DYLVNNAAI   93 (250)
T ss_pred             CEEEECCCC
Confidence            999999984

>PRK14178 bifunctional 5,10-methylene-tetrahydrofolate dehydrogenase/ 5,10-methylene-tetrahydrofolate cyclohydrolase; Provisional

Probab=96.28  E-value=0.047  Score=48.88  Aligned_cols=96  Identities=16%  Similarity=0.215  Sum_probs=73.4

Q ss_pred             cccchhhhhhhhHhhhcCCCCCCCEEEEEcC-ChHHHHHHHHHHHcCCeEEEEeCCchhHHHHHHHcCCCEEecCCCHHH
Q 018067          162 APLLCAGITVYSPLRFYGLDKPGMHVGVVGL-GGLGHVAVKFAKAMGVKVTVISTSPSKKSEAIERLGADSFLVSRDQDE  240 (361)
Q Consensus       162 a~l~~~~~ta~~~l~~~~~~~~g~~vlV~Ga-g~vG~~a~~la~~~g~~vi~~~~~~~~~~~~~~~~g~~~vv~~~~~~~  240 (361)
                      ...||+..+.+..++...---.|++|+|+|- ..+|.-.+.++...|++|++..+....                     
T Consensus       130 ~~~PcTp~av~~ll~~~~i~l~Gk~V~ViGrs~~vGrpla~lL~~~~atVtv~hs~t~~---------------------  188 (279)
T PRK14178        130 GFAPCTPNGIMTLLHEYKISIAGKRAVVVGRSIDVGRPMAALLLNADATVTICHSKTEN---------------------  188 (279)
T ss_pred             CCCCCCHHHHHHHHHHcCCCCCCCEEEEECCCccccHHHHHHHHhCCCeeEEEecChhH---------------------
Confidence            3567777777777877764458999999997 589999999999999999887765422                     


Q ss_pred             HHHhcCCccEEEEcCCCcccHHHHHhccccCCEEEEecCC
Q 018067          241 MQAAMGTMDGIIDTVSAVHPLMPLIGLLKSQGKLVLVGAP  280 (361)
Q Consensus       241 ~~~~~~g~d~vid~~g~~~~~~~~~~~l~~~G~~v~~g~~  280 (361)
                      +.+....+|++|.++|.+..+.  -+.+++|..++++|..
T Consensus       189 L~~~~~~ADIvI~Avgk~~lv~--~~~vk~GavVIDVgi~  226 (279)
T PRK14178        189 LKAELRQADILVSAAGKAGFIT--PDMVKPGATVIDVGIN  226 (279)
T ss_pred             HHHHHhhCCEEEECCCcccccC--HHHcCCCcEEEEeecc
Confidence            2334456899999999776443  3447999999999975

>PRK10538 malonic semialdehyde reductase; Provisional

Probab=96.27  E-value=0.032  Score=49.30  Aligned_cols=72  Identities=19%  Similarity=0.274  Sum_probs=52.7

Q ss_pred             EEEEEcC-ChHHHHHHHHHHHcCCeEEEEeCCchhHHHHHHHcCCCE---EecCCCHHHHHHh-------cCCccEEEEc
Q 018067          186 HVGVVGL-GGLGHVAVKFAKAMGVKVTVISTSPSKKSEAIERLGADS---FLVSRDQDEMQAA-------MGTMDGIIDT  254 (361)
Q Consensus       186 ~vlV~Ga-g~vG~~a~~la~~~g~~vi~~~~~~~~~~~~~~~~g~~~---vv~~~~~~~~~~~-------~~g~d~vid~  254 (361)
                      +++|.|+ |.+|...+..+...|++|++++++.++...+.+.++...   ..|-.+.+.+...       .+++|++|.+
T Consensus         2 ~vlItGasg~iG~~la~~l~~~G~~V~~~~r~~~~~~~~~~~~~~~~~~~~~Dl~~~~~i~~~~~~~~~~~~~id~vi~~   81 (248)
T PRK10538          2 IVLVTGATAGFGECITRRFIQQGHKVIATGRRQERLQELKDELGDNLYIAQLDVRNRAAIEEMLASLPAEWRNIDVLVNN   81 (248)
T ss_pred             EEEEECCCchHHHHHHHHHHHCCCEEEEEECCHHHHHHHHHHhccceEEEEecCCCHHHHHHHHHHHHHHcCCCCEEEEC
Confidence            6899997 999999999999999999999998877666655555432   2344554433322       2479999999


Q ss_pred             CCC
Q 018067          255 VSA  257 (361)
Q Consensus       255 ~g~  257 (361)
                      +|.
T Consensus        82 ag~   84 (248)
T PRK10538         82 AGL   84 (248)
T ss_pred             CCc
Confidence            875

>PRK05653 fabG 3-ketoacyl-(acyl-carrier-protein) reductase; Validated

Probab=96.27  E-value=0.055  Score=47.32  Aligned_cols=75  Identities=19%  Similarity=0.302  Sum_probs=52.3

Q ss_pred             CCCEEEEEcC-ChHHHHHHHHHHHcCCeEEEEeCCchhHHHHHHH---cCCCEE---ecCCCHHHHHHh-------cCCc
Q 018067          183 PGMHVGVVGL-GGLGHVAVKFAKAMGVKVTVISTSPSKKSEAIER---LGADSF---LVSRDQDEMQAA-------MGTM  248 (361)
Q Consensus       183 ~g~~vlV~Ga-g~vG~~a~~la~~~g~~vi~~~~~~~~~~~~~~~---~g~~~v---v~~~~~~~~~~~-------~~g~  248 (361)
                      ++.++||+|+ |.+|...+..+...|.+|+++++++++...+...   .+.+..   .|..+++.+...       .+++
T Consensus         4 ~~~~ilItGasg~iG~~l~~~l~~~g~~v~~~~r~~~~~~~~~~~~~~~~~~~~~~~~D~~~~~~~~~~~~~~~~~~~~i   83 (246)
T PRK05653          4 QGKTALVTGASRGIGRAIALRLAADGAKVVIYDSNEEAAEALAAELRAAGGEARVLVFDVSDEAAVRALIEAAVEAFGAL   83 (246)
T ss_pred             CCCEEEEECCCcHHHHHHHHHHHHCCCEEEEEeCChhHHHHHHHHHHhcCCceEEEEccCCCHHHHHHHHHHHHHHhCCC
Confidence            4578999998 9999999999989999999999987765444332   233221   345554433221       2468


Q ss_pred             cEEEEcCCC
Q 018067          249 DGIIDTVSA  257 (361)
Q Consensus       249 d~vid~~g~  257 (361)
                      |.+|.++|.
T Consensus        84 d~vi~~ag~   92 (246)
T PRK05653         84 DILVNNAGI   92 (246)
T ss_pred             CEEEECCCc
Confidence            999999875

>PRK08340 glucose-1-dehydrogenase; Provisional

Probab=96.27  E-value=0.029  Score=49.94  Aligned_cols=72  Identities=19%  Similarity=0.289  Sum_probs=51.1

Q ss_pred             EEEEEcC-ChHHHHHHHHHHHcCCeEEEEeCCchhHHHHHHHc---CCCE--EecCCCHHHHHHh-------cCCccEEE
Q 018067          186 HVGVVGL-GGLGHVAVKFAKAMGVKVTVISTSPSKKSEAIERL---GADS--FLVSRDQDEMQAA-------MGTMDGII  252 (361)
Q Consensus       186 ~vlV~Ga-g~vG~~a~~la~~~g~~vi~~~~~~~~~~~~~~~~---g~~~--vv~~~~~~~~~~~-------~~g~d~vi  252 (361)
                      ++||.|+ +++|..+++.+...|++|+++++++++...+.+++   +...  ..|..+++.+.++       .+++|++|
T Consensus         2 ~vlItGas~gIG~aia~~l~~~G~~V~~~~r~~~~~~~~~~~l~~~~~~~~~~~Dv~d~~~~~~~~~~~~~~~g~id~li   81 (259)
T PRK08340          2 NVLVTASSRGIGFNVARELLKKGARVVISSRNEENLEKALKELKEYGEVYAVKADLSDKDDLKNLVKEAWELLGGIDALV   81 (259)
T ss_pred             eEEEEcCCcHHHHHHHHHHHHcCCEEEEEeCCHHHHHHHHHHHHhcCCceEEEcCCCCHHHHHHHHHHHHHhcCCCCEEE
Confidence            5899987 99999999999999999999999877665554443   2111  2344454433322       24799999


Q ss_pred             EcCCC
Q 018067          253 DTVSA  257 (361)
Q Consensus       253 d~~g~  257 (361)
                      +++|.
T Consensus        82 ~naG~   86 (259)
T PRK08340         82 WNAGN   86 (259)
T ss_pred             ECCCC
Confidence            99884

>PRK06398 aldose dehydrogenase; Validated

Probab=96.27  E-value=0.028  Score=50.09  Aligned_cols=69  Identities=16%  Similarity=0.207  Sum_probs=49.1

Q ss_pred             CCCEEEEEcC-ChHHHHHHHHHHHcCCeEEEEeCCchhHHHHHHHcCCC-EEecCCCHHHHHHh-------cCCccEEEE
Q 018067          183 PGMHVGVVGL-GGLGHVAVKFAKAMGVKVTVISTSPSKKSEAIERLGAD-SFLVSRDQDEMQAA-------MGTMDGIID  253 (361)
Q Consensus       183 ~g~~vlV~Ga-g~vG~~a~~la~~~g~~vi~~~~~~~~~~~~~~~~g~~-~vv~~~~~~~~~~~-------~~g~d~vid  253 (361)
                      .|+++||.|+ |++|..++..+...|++|+++++++++..      ... ...|..+++.+.++       .+++|++|+
T Consensus         5 ~gk~vlItGas~gIG~~ia~~l~~~G~~Vi~~~r~~~~~~------~~~~~~~D~~~~~~i~~~~~~~~~~~~~id~li~   78 (258)
T PRK06398          5 KDKVAIVTGGSQGIGKAVVNRLKEEGSNVINFDIKEPSYN------DVDYFKVDVSNKEQVIKGIDYVISKYGRIDILVN   78 (258)
T ss_pred             CCCEEEEECCCchHHHHHHHHHHHCCCeEEEEeCCccccC------ceEEEEccCCCHHHHHHHHHHHHHHcCCCCEEEE
Confidence            4688999997 99999999999999999999988764321      111 12355555433332       246999999


Q ss_pred             cCCC
Q 018067          254 TVSA  257 (361)
Q Consensus       254 ~~g~  257 (361)
                      ++|.
T Consensus        79 ~Ag~   82 (258)
T PRK06398         79 NAGI   82 (258)
T ss_pred             CCCC
Confidence            9884

>PRK06125 short chain dehydrogenase; Provisional

Probab=96.27  E-value=0.025  Score=50.36  Aligned_cols=75  Identities=20%  Similarity=0.325  Sum_probs=53.6

Q ss_pred             CCCEEEEEcC-ChHHHHHHHHHHHcCCeEEEEeCCchhHHHHHHHc----CCC-E--EecCCCHHHHHHh---cCCccEE
Q 018067          183 PGMHVGVVGL-GGLGHVAVKFAKAMGVKVTVISTSPSKKSEAIERL----GAD-S--FLVSRDQDEMQAA---MGTMDGI  251 (361)
Q Consensus       183 ~g~~vlV~Ga-g~vG~~a~~la~~~g~~vi~~~~~~~~~~~~~~~~----g~~-~--vv~~~~~~~~~~~---~~g~d~v  251 (361)
                      .+++++|.|+ |++|..+++.+...|++|++++++.++...+.+++    +.. .  ..|..+++.+..+   .+++|++
T Consensus         6 ~~k~vlItG~~~giG~~ia~~l~~~G~~V~~~~r~~~~~~~~~~~l~~~~~~~~~~~~~D~~~~~~~~~~~~~~g~id~l   85 (259)
T PRK06125          6 AGKRVLITGASKGIGAAAAEAFAAEGCHLHLVARDADALEALAADLRAAHGVDVAVHALDLSSPEAREQLAAEAGDIDIL   85 (259)
T ss_pred             CCCEEEEeCCCchHHHHHHHHHHHcCCEEEEEeCCHHHHHHHHHHHHhhcCCceEEEEecCCCHHHHHHHHHHhCCCCEE
Confidence            4789999997 99999999999999999999999877665543333    322 1  2344455444433   2479999


Q ss_pred             EEcCCC
Q 018067          252 IDTVSA  257 (361)
Q Consensus       252 id~~g~  257 (361)
                      |+++|.
T Consensus        86 v~~ag~   91 (259)
T PRK06125         86 VNNAGA   91 (259)
T ss_pred             EECCCC
Confidence            999884

>PRK12936 3-ketoacyl-(acyl-carrier-protein) reductase NodG; Reviewed

Probab=96.26  E-value=0.044  Score=48.07  Aligned_cols=75  Identities=24%  Similarity=0.327  Sum_probs=54.0

Q ss_pred             CCCEEEEEcC-ChHHHHHHHHHHHcCCeEEEEeCCchhHHHHHHHcCCCE---EecCCCHHHHHHh-------cCCccEE
Q 018067          183 PGMHVGVVGL-GGLGHVAVKFAKAMGVKVTVISTSPSKKSEAIERLGADS---FLVSRDQDEMQAA-------MGTMDGI  251 (361)
Q Consensus       183 ~g~~vlV~Ga-g~vG~~a~~la~~~g~~vi~~~~~~~~~~~~~~~~g~~~---vv~~~~~~~~~~~-------~~g~d~v  251 (361)
                      ++.++||.|+ |.+|..++..+...|++|+...++.++...+.+.++...   ..|-.+.+.+.++       .+++|.+
T Consensus         5 ~~~~vlItGa~g~iG~~la~~l~~~g~~v~~~~~~~~~~~~~~~~~~~~~~~~~~D~~~~~~~~~~~~~~~~~~~~id~v   84 (245)
T PRK12936          5 SGRKALVTGASGGIGEEIARLLHAQGAIVGLHGTRVEKLEALAAELGERVKIFPANLSDRDEVKALGQKAEADLEGVDIL   84 (245)
T ss_pred             CCCEEEEECCCChHHHHHHHHHHHCCCEEEEEcCCHHHHHHHHHHhCCceEEEEccCCCHHHHHHHHHHHHHHcCCCCEE
Confidence            4678999997 999999999998899999888888777666655555321   2344444433332       2479999


Q ss_pred             EEcCCC
Q 018067          252 IDTVSA  257 (361)
Q Consensus       252 id~~g~  257 (361)
                      |.++|.
T Consensus        85 i~~ag~   90 (245)
T PRK12936         85 VNNAGI   90 (245)
T ss_pred             EECCCC
Confidence            999985

>PRK08085 gluconate 5-dehydrogenase; Provisional

Probab=96.25  E-value=0.034  Score=49.27  Aligned_cols=75  Identities=19%  Similarity=0.380  Sum_probs=53.7

Q ss_pred             CCCEEEEEcC-ChHHHHHHHHHHHcCCeEEEEeCCchhHHHHHHHc---CCCE---EecCCCHHHHHHh-------cCCc
Q 018067          183 PGMHVGVVGL-GGLGHVAVKFAKAMGVKVTVISTSPSKKSEAIERL---GADS---FLVSRDQDEMQAA-------MGTM  248 (361)
Q Consensus       183 ~g~~vlV~Ga-g~vG~~a~~la~~~g~~vi~~~~~~~~~~~~~~~~---g~~~---vv~~~~~~~~~~~-------~~g~  248 (361)
                      .++++||.|+ |++|..+++.+...|++|++++++.++...+.+++   +...   ..|..+++.+..+       .+++
T Consensus         8 ~~k~~lItGas~giG~~ia~~L~~~G~~vvl~~r~~~~~~~~~~~l~~~~~~~~~~~~Dl~~~~~~~~~~~~~~~~~~~i   87 (254)
T PRK08085          8 AGKNILITGSAQGIGFLLATGLAEYGAEIIINDITAERAELAVAKLRQEGIKAHAAPFNVTHKQEVEAAIEHIEKDIGPI   87 (254)
T ss_pred             CCCEEEEECCCChHHHHHHHHHHHcCCEEEEEcCCHHHHHHHHHHHHhcCCeEEEEecCCCCHHHHHHHHHHHHHhcCCC
Confidence            5778999997 99999999999999999999998877665554433   2221   2344554433332       2469


Q ss_pred             cEEEEcCCC
Q 018067          249 DGIIDTVSA  257 (361)
Q Consensus       249 d~vid~~g~  257 (361)
                      |+++.++|.
T Consensus        88 d~vi~~ag~   96 (254)
T PRK08085         88 DVLINNAGI   96 (254)
T ss_pred             CEEEECCCc
Confidence            999999984

>PRK06181 short chain dehydrogenase; Provisional

Probab=96.25  E-value=0.024  Score=50.46  Aligned_cols=74  Identities=15%  Similarity=0.278  Sum_probs=51.6

Q ss_pred             CCEEEEEcC-ChHHHHHHHHHHHcCCeEEEEeCCchhHHHHHHHc---CCC---EEecCCCHHHHHHh-------cCCcc
Q 018067          184 GMHVGVVGL-GGLGHVAVKFAKAMGVKVTVISTSPSKKSEAIERL---GAD---SFLVSRDQDEMQAA-------MGTMD  249 (361)
Q Consensus       184 g~~vlV~Ga-g~vG~~a~~la~~~g~~vi~~~~~~~~~~~~~~~~---g~~---~vv~~~~~~~~~~~-------~~g~d  249 (361)
                      +.++||.|+ |.+|..+++.+...|++|++++++.++...+.+++   +..   ...|..+.+.+..+       .+++|
T Consensus         1 ~~~vlVtGasg~iG~~la~~l~~~g~~Vi~~~r~~~~~~~~~~~l~~~~~~~~~~~~Dl~~~~~~~~~~~~~~~~~~~id   80 (263)
T PRK06181          1 GKVVIITGASEGIGRALAVRLARAGAQLVLAARNETRLASLAQELADHGGEALVVPTDVSDAEACERLIEAAVARFGGID   80 (263)
T ss_pred             CCEEEEecCCcHHHHHHHHHHHHCCCEEEEEeCCHHHHHHHHHHHHhcCCcEEEEEccCCCHHHHHHHHHHHHHHcCCCC
Confidence            357999998 99999999999999999999999876655443332   322   12344554433322       24789


Q ss_pred             EEEEcCCC
Q 018067          250 GIIDTVSA  257 (361)
Q Consensus       250 ~vid~~g~  257 (361)
                      ++|.++|.
T Consensus        81 ~vi~~ag~   88 (263)
T PRK06181         81 ILVNNAGI   88 (263)
T ss_pred             EEEECCCc
Confidence            99999875

>PRK13944 protein-L-isoaspartate O-methyltransferase; Provisional

Probab=96.24  E-value=0.085  Score=45.33  Aligned_cols=98  Identities=28%  Similarity=0.278  Sum_probs=63.7

Q ss_pred             cCCCCCCCEEEEEcCChHHHHHHHHHHHcC--CeEEEEeCCchhHHHHHH---HcCCC---EEecCCCHHHHHHhcCCcc
Q 018067          178 YGLDKPGMHVGVVGLGGLGHVAVKFAKAMG--VKVTVISTSPSKKSEAIE---RLGAD---SFLVSRDQDEMQAAMGTMD  249 (361)
Q Consensus       178 ~~~~~~g~~vlV~Gag~vG~~a~~la~~~g--~~vi~~~~~~~~~~~~~~---~~g~~---~vv~~~~~~~~~~~~~g~d  249 (361)
                      ...++++++||=+|+|. |..++.+++..+  .+|+.++.+++....+.+   +.+..   .++..+-.+... ....+|
T Consensus        67 ~l~~~~~~~VLDiG~Gs-G~~~~~la~~~~~~g~V~~iD~~~~~~~~a~~~l~~~~~~~~v~~~~~d~~~~~~-~~~~fD  144 (205)
T PRK13944         67 LIEPRPGMKILEVGTGS-GYQAAVCAEAIERRGKVYTVEIVKELAIYAAQNIERLGYWGVVEVYHGDGKRGLE-KHAPFD  144 (205)
T ss_pred             hcCCCCCCEEEEECcCc-cHHHHHHHHhcCCCCEEEEEeCCHHHHHHHHHHHHHcCCCCcEEEEECCcccCCc-cCCCcc
Confidence            34468899999999864 777777777764  589999988765444332   33432   222211111111 124799


Q ss_pred             EEEEcCCCcccHHHHHhccccCCEEEEe
Q 018067          250 GIIDTVSAVHPLMPLIGLLKSQGKLVLV  277 (361)
Q Consensus       250 ~vid~~g~~~~~~~~~~~l~~~G~~v~~  277 (361)
                      .|+-+..........++.|++||+++..
T Consensus       145 ~Ii~~~~~~~~~~~l~~~L~~gG~lvi~  172 (205)
T PRK13944        145 AIIVTAAASTIPSALVRQLKDGGVLVIP  172 (205)
T ss_pred             EEEEccCcchhhHHHHHhcCcCcEEEEE
Confidence            9987766666567888999999999764

>PF02670 DXP_reductoisom: 1-deoxy-D-xylulose 5-phosphate reductoisomerase; InterPro: IPR013512 1-deoxy-D-xylulose 5-phosphate reductoisomerase synthesises 2-C-methyl-D-erythritol 4-phosphate from 1-deoxy-D-xylulose 5-phosphate in a single step by intramolecular rearrangement and reduction and is responsible for terpenoid biosynthesis in some organisms []

Probab=96.24  E-value=0.095  Score=41.18  Aligned_cols=90  Identities=14%  Similarity=0.358  Sum_probs=62.9

Q ss_pred             EEEEcC-ChHHHHHHHHHHHcC--CeEEEEe--CCchhHHHHHHHcCCCEEecCCCH--HHH------------------
Q 018067          187 VGVVGL-GGLGHVAVKFAKAMG--VKVTVIS--TSPSKKSEAIERLGADSFLVSRDQ--DEM------------------  241 (361)
Q Consensus       187 vlV~Ga-g~vG~~a~~la~~~g--~~vi~~~--~~~~~~~~~~~~~g~~~vv~~~~~--~~~------------------  241 (361)
                      |.|+|+ |.||..+..+.+...  ++|+...  ++-+.+.+.+++|....++..+..  +.+                  
T Consensus         1 i~ILGsTGSIG~qtLdVi~~~~d~f~v~~Lsa~~n~~~L~~q~~~f~p~~v~i~~~~~~~~l~~~~~~~~~~~~v~~G~~   80 (129)
T PF02670_consen    1 IAILGSTGSIGTQTLDVIRKHPDKFEVVALSAGSNIEKLAEQAREFKPKYVVIADEEAYEELKKALPSKGPGIEVLSGPE   80 (129)
T ss_dssp             EEEESTTSHHHHHHHHHHHHCTTTEEEEEEEESSTHHHHHHHHHHHT-SEEEESSHHHHHHHHHHHHHTTSSSEEEESHH
T ss_pred             CEEEcCCcHHHHHHHHHHHhCCCceEEEEEEcCCCHHHHHHHHHHhCCCEEEEcCHHHHHHHHHHhhhcCCCCEEEeChH
Confidence            578998 999999999999986  5776655  455677888889988776655442  111                  


Q ss_pred             --HHhc--CCccEEEEcCCCcccHHHHHhccccCCEEEE
Q 018067          242 --QAAM--GTMDGIIDTVSAVHPLMPLIGLLKSQGKLVL  276 (361)
Q Consensus       242 --~~~~--~g~d~vid~~g~~~~~~~~~~~l~~~G~~v~  276 (361)
                        .++.  ..+|+|+..+.+-.++...+..++.+-++.+
T Consensus        81 ~l~~~~~~~~~D~vv~Ai~G~aGL~pt~~Ai~~gk~iaL  119 (129)
T PF02670_consen   81 GLEELAEEPEVDIVVNAIVGFAGLKPTLAAIKAGKDIAL  119 (129)
T ss_dssp             HHHHHHTHTT-SEEEE--SSGGGHHHHHHHHHTTSEEEE
T ss_pred             HHHHHhcCCCCCEEEEeCcccchHHHHHHHHHCCCeEEE
Confidence              1211  3699999998888888889988887766654

In Arabidopsis thaliana 1-deoxy-D-xylulose 5-phosphate reductoisomerase is the first committed enzyme of the non-mevalonate pathway for isoprenoid biosynthesis. The enzyme requires Mn2+, Co2+ or Mg2+ for activity, with the first being most effective. This domain is found at the N terminus of bacterial and plant 1-deoxy-D-xylulose 5-phosphate reductoisomerases.; GO: 0070402 NADPH binding, 0055114 oxidation-reduction process; PDB: 1R0K_D 1R0L_C 3A14_A 3A06_A 3AUA_A 3AU9_B 3AU8_B 3IIE_A 2Y1D_B 4AIC_A ....

>PRK12481 2-deoxy-D-gluconate 3-dehydrogenase; Provisional

Probab=96.23  E-value=0.044  Score=48.58  Aligned_cols=75  Identities=19%  Similarity=0.264  Sum_probs=51.7

Q ss_pred             CCCEEEEEcC-ChHHHHHHHHHHHcCCeEEEEeCCch-hHHHHHHHcCCCE---EecCCCHHHHHHh-------cCCccE
Q 018067          183 PGMHVGVVGL-GGLGHVAVKFAKAMGVKVTVISTSPS-KKSEAIERLGADS---FLVSRDQDEMQAA-------MGTMDG  250 (361)
Q Consensus       183 ~g~~vlV~Ga-g~vG~~a~~la~~~g~~vi~~~~~~~-~~~~~~~~~g~~~---vv~~~~~~~~~~~-------~~g~d~  250 (361)
                      +|+++||.|+ +++|.++++.+...|++|+++.+... +.....+..+.+.   ..|..+++.+.++       .+++|+
T Consensus         7 ~~k~~lItGas~gIG~aia~~l~~~G~~vv~~~~~~~~~~~~~~~~~~~~~~~~~~Dl~~~~~~~~~~~~~~~~~g~iD~   86 (251)
T PRK12481          7 NGKVAIITGCNTGLGQGMAIGLAKAGADIVGVGVAEAPETQAQVEALGRKFHFITADLIQQKDIDSIVSQAVEVMGHIDI   86 (251)
T ss_pred             CCCEEEEeCCCchHHHHHHHHHHHCCCEEEEecCchHHHHHHHHHHcCCeEEEEEeCCCCHHHHHHHHHHHHHHcCCCCE
Confidence            5789999997 99999999999999999998876542 2222334445332   2355555443332       247999


Q ss_pred             EEEcCCC
Q 018067          251 IIDTVSA  257 (361)
Q Consensus       251 vid~~g~  257 (361)
                      +++++|.
T Consensus        87 lv~~ag~   93 (251)
T PRK12481         87 LINNAGI   93 (251)
T ss_pred             EEECCCc
Confidence            9999884

>PRK07370 enoyl-(acyl carrier protein) reductase; Validated

Probab=96.23  E-value=0.074  Score=47.37  Aligned_cols=98  Identities=14%  Similarity=0.174  Sum_probs=61.5

Q ss_pred             CCCEEEEEcC---ChHHHHHHHHHHHcCCeEEEEeCCch--h----HHHHHHHcCCC--EEecCCCHHHHHHh-------
Q 018067          183 PGMHVGVVGL---GGLGHVAVKFAKAMGVKVTVISTSPS--K----KSEAIERLGAD--SFLVSRDQDEMQAA-------  244 (361)
Q Consensus       183 ~g~~vlV~Ga---g~vG~~a~~la~~~g~~vi~~~~~~~--~----~~~~~~~~g~~--~vv~~~~~~~~~~~-------  244 (361)
                      .|++++|.|+   +++|.+++..+...|++|+++.++.+  +    ..++.++.+..  ...|-.+++.+.++       
T Consensus         5 ~~k~~lItGas~~~GIG~aia~~la~~G~~v~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~Dl~d~~~v~~~~~~~~~~   84 (258)
T PRK07370          5 TGKKALVTGIANNRSIAWGIAQQLHAAGAELGITYLPDEKGRFEKKVRELTEPLNPSLFLPCDVQDDAQIEETFETIKQK   84 (258)
T ss_pred             CCcEEEEeCCCCCCchHHHHHHHHHHCCCEEEEEecCcccchHHHHHHHHHhccCcceEeecCcCCHHHHHHHHHHHHHH
Confidence            4788999996   48999999999999999988764332  2    22222222211  12355555443322       


Q ss_pred             cCCccEEEEcCCCcc-----------------------------cHHHHHhccccCCEEEEecCC
Q 018067          245 MGTMDGIIDTVSAVH-----------------------------PLMPLIGLLKSQGKLVLVGAP  280 (361)
Q Consensus       245 ~~g~d~vid~~g~~~-----------------------------~~~~~~~~l~~~G~~v~~g~~  280 (361)
                      .+++|++|+++|...                             ..+.++..++++|+++.++..
T Consensus        85 ~g~iD~lv~nag~~~~~~~~~~~~~~~~~~~~~~~~iN~~~~~~l~~~~~~~m~~~g~Iv~isS~  149 (258)
T PRK07370         85 WGKLDILVHCLAFAGKEELIGDFSATSREGFARALEISAYSLAPLCKAAKPLMSEGGSIVTLTYL  149 (258)
T ss_pred             cCCCCEEEEcccccCcccccCcchhhCHHHHHHHheeeeHHHHHHHHHHHHHHhhCCeEEEEecc
Confidence            247999999998421                             112345566678999988764

>PF02353 CMAS: Mycolic acid cyclopropane synthetase; InterPro: IPR003333 This entry represents mycolic acid cyclopropane synthases and related enzymes, including CmaA1, CmaA2 (cyclopropane mycolic acid synthase A1 and A2) and MmaA1-4 (methoxymycolic acid synthase A1-4)

Probab=96.22  E-value=0.026  Score=50.78  Aligned_cols=100  Identities=29%  Similarity=0.266  Sum_probs=58.4

Q ss_pred             HhhhcCCCCCCCEEEEEcCChHHHHHHHHHHHcCCeEEEEeCCchhHHHHH---HHcCCC--EEecCCCHHHHHHhcCCc
Q 018067          174 PLRFYGLDKPGMHVGVVGLGGLGHVAVKFAKAMGVKVTVISTSPSKKSEAI---ERLGAD--SFLVSRDQDEMQAAMGTM  248 (361)
Q Consensus       174 ~l~~~~~~~~g~~vlV~Gag~vG~~a~~la~~~g~~vi~~~~~~~~~~~~~---~~~g~~--~vv~~~~~~~~~~~~~g~  248 (361)
                      .+-...++++|++||-+|+| -|-.+..+|+..|++|+.++-+++..+.+.   ++.|..  ..+...+.   ..+...+
T Consensus        53 ~~~~~~~l~~G~~vLDiGcG-wG~~~~~~a~~~g~~v~gitlS~~Q~~~a~~~~~~~gl~~~v~v~~~D~---~~~~~~f  128 (273)
T PF02353_consen   53 LLCEKLGLKPGDRVLDIGCG-WGGLAIYAAERYGCHVTGITLSEEQAEYARERIREAGLEDRVEVRLQDY---RDLPGKF  128 (273)
T ss_dssp             HHHTTTT--TT-EEEEES-T-TSHHHHHHHHHH--EEEEEES-HHHHHHHHHHHHCSTSSSTEEEEES-G---GG---S-
T ss_pred             HHHHHhCCCCCCEEEEeCCC-ccHHHHHHHHHcCcEEEEEECCHHHHHHHHHHHHhcCCCCceEEEEeec---cccCCCC
Confidence            34445568999999999987 467778889888999999999887765543   334432  11222221   2333488


Q ss_pred             cEEEEc-----CCC---cccHHHHHhccccCCEEEEe
Q 018067          249 DGIIDT-----VSA---VHPLMPLIGLLKSQGKLVLV  277 (361)
Q Consensus       249 d~vid~-----~g~---~~~~~~~~~~l~~~G~~v~~  277 (361)
                      |.|+..     +|.   +..+..+.+.|+|+|+++.-
T Consensus       129 D~IvSi~~~Ehvg~~~~~~~f~~~~~~LkpgG~~~lq  165 (273)
T PF02353_consen  129 DRIVSIEMFEHVGRKNYPAFFRKISRLLKPGGRLVLQ  165 (273)
T ss_dssp             SEEEEESEGGGTCGGGHHHHHHHHHHHSETTEEEEEE
T ss_pred             CEEEEEechhhcChhHHHHHHHHHHHhcCCCcEEEEE
Confidence            987653     443   23467788999999998753

All are thought to be S-adenosyl-L-methionine (SAM) utilising methyltransferases []. Mycolic acid cyclopropane synthase or cyclopropane-fatty-acyl-phospholipid synthase (CFA synthase) 2.1.1.79 from EC catalyses the reaction: S-adenosyl-L-methionine + phospholipid olefinic fatty acid -> S-adenosyl-L-homocysteine + phospholipid cyclopropane fatty acid. The major mycolic acid produced by Mycobacterium tuberculosis contains two cis-cyclopropanes in the meromycolate chain. Cyclopropanation may contribute to the structural integrity of the cell wall complex [].; GO: 0008610 lipid biosynthetic process; PDB: 3HA5_A 2FK8_A 3HA7_A 3HA3_A 2FK7_A 1KPG_D 1KP9_B 1KPH_D 3VC2_E 3VC1_D ....

>PRK06463 fabG 3-ketoacyl-(acyl-carrier-protein) reductase; Provisional

Probab=96.22  E-value=0.046  Score=48.47  Aligned_cols=75  Identities=17%  Similarity=0.275  Sum_probs=50.5

Q ss_pred             CCCEEEEEcC-ChHHHHHHHHHHHcCCeEEEEeCCchhHHHHHHHcCCC-EEecCCCHHHHHHh-------cCCccEEEE
Q 018067          183 PGMHVGVVGL-GGLGHVAVKFAKAMGVKVTVISTSPSKKSEAIERLGAD-SFLVSRDQDEMQAA-------MGTMDGIID  253 (361)
Q Consensus       183 ~g~~vlV~Ga-g~vG~~a~~la~~~g~~vi~~~~~~~~~~~~~~~~g~~-~vv~~~~~~~~~~~-------~~g~d~vid  253 (361)
                      .+++++|.|+ |++|..+++.+...|++|+++.+..++.....+..+.. ...|..+++.+.++       .+++|++|.
T Consensus         6 ~~k~~lItGas~gIG~~~a~~l~~~G~~v~~~~~~~~~~~~~l~~~~~~~~~~Dl~~~~~~~~~~~~~~~~~~~id~li~   85 (255)
T PRK06463          6 KGKVALITGGTRGIGRAIAEAFLREGAKVAVLYNSAENEAKELREKGVFTIKCDVGNRDQVKKSKEVVEKEFGRVDVLVN   85 (255)
T ss_pred             CCCEEEEeCCCChHHHHHHHHHHHCCCEEEEEeCCcHHHHHHHHhCCCeEEEecCCCHHHHHHHHHHHHHHcCCCCEEEE
Confidence            4688999997 99999999999999999988766544332222333432 22355555443332       247999999


Q ss_pred             cCCC
Q 018067          254 TVSA  257 (361)
Q Consensus       254 ~~g~  257 (361)
                      ++|.
T Consensus        86 ~ag~   89 (255)
T PRK06463         86 NAGI   89 (255)
T ss_pred             CCCc
Confidence            9875

>PRK08213 gluconate 5-dehydrogenase; Provisional

Probab=96.22  E-value=0.029  Score=49.89  Aligned_cols=75  Identities=23%  Similarity=0.318  Sum_probs=53.7

Q ss_pred             CCCEEEEEcC-ChHHHHHHHHHHHcCCeEEEEeCCchhHHHHHHHc---CCC---EEecCCCHHHHHHh-------cCCc
Q 018067          183 PGMHVGVVGL-GGLGHVAVKFAKAMGVKVTVISTSPSKKSEAIERL---GAD---SFLVSRDQDEMQAA-------MGTM  248 (361)
Q Consensus       183 ~g~~vlV~Ga-g~vG~~a~~la~~~g~~vi~~~~~~~~~~~~~~~~---g~~---~vv~~~~~~~~~~~-------~~g~  248 (361)
                      +++++||.|+ |.+|...++.+...|++|++++++.++.+.+.+.+   +..   ...|..+++.+.++       .+++
T Consensus        11 ~~k~ilItGa~g~IG~~la~~l~~~G~~V~~~~r~~~~~~~~~~~i~~~~~~~~~~~~Dl~d~~~i~~~~~~~~~~~~~i   90 (259)
T PRK08213         11 SGKTALVTGGSRGLGLQIAEALGEAGARVVLSARKAEELEEAAAHLEALGIDALWIAADVADEADIERLAEETLERFGHV   90 (259)
T ss_pred             CCCEEEEECCCchHHHHHHHHHHHcCCEEEEEeCCHHHHHHHHHHHHhcCCeEEEEEccCCCHHHHHHHHHHHHHHhCCC
Confidence            5788999997 99999999999999999999999877655543332   222   22355555544322       2479


Q ss_pred             cEEEEcCCC
Q 018067          249 DGIIDTVSA  257 (361)
Q Consensus       249 d~vid~~g~  257 (361)
                      |.+|.++|.
T Consensus        91 d~vi~~ag~   99 (259)
T PRK08213         91 DILVNNAGA   99 (259)
T ss_pred             CEEEECCCC
Confidence            999999874

>PRK14176 bifunctional 5,10-methylene-tetrahydrofolate dehydrogenase/ 5,10-methylene-tetrahydrofolate cyclohydrolase; Provisional

Probab=96.22  E-value=0.047  Score=49.04  Aligned_cols=96  Identities=18%  Similarity=0.220  Sum_probs=74.0

Q ss_pred             cccchhhhhhhhHhhhcCCCCCCCEEEEEcC-ChHHHHHHHHHHHcCCeEEEEeCCchhHHHHHHHcCCCEEecCCCHHH
Q 018067          162 APLLCAGITVYSPLRFYGLDKPGMHVGVVGL-GGLGHVAVKFAKAMGVKVTVISTSPSKKSEAIERLGADSFLVSRDQDE  240 (361)
Q Consensus       162 a~l~~~~~ta~~~l~~~~~~~~g~~vlV~Ga-g~vG~~a~~la~~~g~~vi~~~~~~~~~~~~~~~~g~~~vv~~~~~~~  240 (361)
                      ...||+..+.+..++...---.|++|+|+|. ..+|.-.+.++...|++|++..+....                     
T Consensus       142 ~~~PcTp~av~~ll~~~~i~l~Gk~vvViGrs~iVGkPla~lL~~~~atVtv~hs~T~~---------------------  200 (287)
T PRK14176        142 GLVPCTPHGVIRALEEYGVDIEGKNAVIVGHSNVVGKPMAAMLLNRNATVSVCHVFTDD---------------------  200 (287)
T ss_pred             CCCCCcHHHHHHHHHHcCCCCCCCEEEEECCCcccHHHHHHHHHHCCCEEEEEeccCCC---------------------
Confidence            3567777777777877664358999999997 559999999999999999887653322                     


Q ss_pred             HHHhcCCccEEEEcCCCcccHHHHHhccccCCEEEEecCC
Q 018067          241 MQAAMGTMDGIIDTVSAVHPLMPLIGLLKSQGKLVLVGAP  280 (361)
Q Consensus       241 ~~~~~~g~d~vid~~g~~~~~~~~~~~l~~~G~~v~~g~~  280 (361)
                      +.+.+..+|++|.++|.+..+  -.+.++++..++.+|..
T Consensus       201 l~~~~~~ADIvv~AvG~p~~i--~~~~vk~gavVIDvGin  238 (287)
T PRK14176        201 LKKYTLDADILVVATGVKHLI--KADMVKEGAVIFDVGIT  238 (287)
T ss_pred             HHHHHhhCCEEEEccCCcccc--CHHHcCCCcEEEEeccc
Confidence            233445689999999998744  45688999999999974

>cd01079 NAD_bind_m-THF_DH NAD binding domain of methylene-tetrahydrofolate dehydrogenase

Probab=96.21  E-value=0.036  Score=46.60  Aligned_cols=115  Identities=15%  Similarity=0.158  Sum_probs=78.3

Q ss_pred             cccchhhhhhhhHhhhcCC---------CCCCCEEEEEcC-ChHHHHHHHHHHHcCCeEEEEeCCchhHHHHHHHcCC-C
Q 018067          162 APLLCAGITVYSPLRFYGL---------DKPGMHVGVVGL-GGLGHVAVKFAKAMGVKVTVISTSPSKKSEAIERLGA-D  230 (361)
Q Consensus       162 a~l~~~~~ta~~~l~~~~~---------~~~g~~vlV~Ga-g~vG~~a~~la~~~g~~vi~~~~~~~~~~~~~~~~g~-~  230 (361)
                      ..+||+..+.+..|+...-         --.|++|+|+|- ..+|.=.+.++...|++|++.+.+.-..  . .+.+- .
T Consensus        31 ~~~PCTp~avi~lL~~~~i~~~~~~~~~~l~GK~vvVIGrS~iVGkPla~lL~~~~AtVti~~~~~~~~--~-~~~~~~~  107 (197)
T cd01079          31 SILPCTPLAIVKILEFLGIYNKILPYGNRLYGKTITIINRSEVVGRPLAALLANDGARVYSVDINGIQV--F-TRGESIR  107 (197)
T ss_pred             CccCCCHHHHHHHHHHhCCcccccccCCCCCCCEEEEECCCccchHHHHHHHHHCCCEEEEEecCcccc--c-ccccccc
Confidence            3467777777777776542         257999999996 7899999999999999999876443211  0 00000 0


Q ss_pred             EEecC-CC-HHHHHHhcCCccEEEEcCCCcccHHHHHhccccCCEEEEecCC
Q 018067          231 SFLVS-RD-QDEMQAAMGTMDGIIDTVSAVHPLMPLIGLLKSQGKLVLVGAP  280 (361)
Q Consensus       231 ~vv~~-~~-~~~~~~~~~g~d~vid~~g~~~~~~~~~~~l~~~G~~v~~g~~  280 (361)
                      +--.. .+ +..+.+....+|+||-++|.+. +.--.+.+++|..++.+|..
T Consensus       108 hs~t~~~~~~~~l~~~~~~ADIVIsAvG~~~-~~i~~d~ik~GavVIDVGi~  158 (197)
T cd01079         108 HEKHHVTDEEAMTLDCLSQSDVVITGVPSPN-YKVPTELLKDGAICINFASI  158 (197)
T ss_pred             cccccccchhhHHHHHhhhCCEEEEccCCCC-CccCHHHcCCCcEEEEcCCC
Confidence            00000 11 1235566778999999999988 43346788999999999965

The NAD-binding domain of methylene-tetrahydrofolate dehydrogenase (m-THF DH). M-THF is a versatile carrier of activated one-carbon units. The major one-carbon folate donors are N-5 methyltetrahydrofolate, N5,N10-m-THF, and N10-formayltetrahydrofolate. The oxidation of metabolic intermediate m-THF to m-THF requires the enzyme m-THF DH. M-THF DH is a component of an unusual monofunctional enzyme; in eukaryotes, m-THF DH is typically found as part of a multifunctional protein. NADP-dependent m-THF DHs in mammals, birds and yeast are components of a trifunctional enzyme with DH, cyclohydrolase, and synthetase activities. Certain eukaryotic cells also contain homodimeric bifunctional DH/cyclodrolase form. In bacteria, monofunctional DH, as well as bifunctional DH/cyclodrolase are found. In addition, yeast (S. cerevisiae) also express an monofunctional DH. This family contains only the monofunctional

>COG2230 Cfa Cyclopropane fatty acid synthase and related methyltransferases [Cell envelope biogenesis, outer membrane]

Probab=96.21  E-value=0.024  Score=50.69  Aligned_cols=110  Identities=23%  Similarity=0.226  Sum_probs=74.3

Q ss_pred             hhhhhhhHhhhcCCCCCCCEEEEEcCChHHHHHHHHHHHcCCeEEEEeCCchhHHHHHH---HcCCC-EE-ecCCCHHHH
Q 018067          167 AGITVYSPLRFYGLDKPGMHVGVVGLGGLGHVAVKFAKAMGVKVTVISTSPSKKSEAIE---RLGAD-SF-LVSRDQDEM  241 (361)
Q Consensus       167 ~~~ta~~~l~~~~~~~~g~~vlV~Gag~vG~~a~~la~~~g~~vi~~~~~~~~~~~~~~---~~g~~-~v-v~~~~~~~~  241 (361)
                      +-..++..+....++++|++||=+|+|- |-+++.+|+.+|++|+.++-+++......+   +.|.. .+ +-..+   .
T Consensus        56 AQ~~k~~~~~~kl~L~~G~~lLDiGCGW-G~l~~~aA~~y~v~V~GvTlS~~Q~~~~~~r~~~~gl~~~v~v~l~d---~  131 (283)
T COG2230          56 AQRAKLDLILEKLGLKPGMTLLDIGCGW-GGLAIYAAEEYGVTVVGVTLSEEQLAYAEKRIAARGLEDNVEVRLQD---Y  131 (283)
T ss_pred             HHHHHHHHHHHhcCCCCCCEEEEeCCCh-hHHHHHHHHHcCCEEEEeeCCHHHHHHHHHHHHHcCCCcccEEEecc---c
Confidence            3445566666677799999999999976 778889999999999999999876655533   34533 11 10111   1


Q ss_pred             HHhcCCccEEEE-----cCCC---cccHHHHHhccccCCEEEEecCC
Q 018067          242 QAAMGTMDGIID-----TVSA---VHPLMPLIGLLKSQGKLVLVGAP  280 (361)
Q Consensus       242 ~~~~~g~d~vid-----~~g~---~~~~~~~~~~l~~~G~~v~~g~~  280 (361)
                      +...+.||-|+-     -+|.   +..+..+.+.|+++|++++-...
T Consensus       132 rd~~e~fDrIvSvgmfEhvg~~~~~~ff~~~~~~L~~~G~~llh~I~  178 (283)
T COG2230         132 RDFEEPFDRIVSVGMFEHVGKENYDDFFKKVYALLKPGGRMLLHSIT  178 (283)
T ss_pred             cccccccceeeehhhHHHhCcccHHHHHHHHHhhcCCCceEEEEEec
Confidence            223345777643     4454   34567788999999999876543

>PLN00141 Tic62-NAD(P)-related group II protein; Provisional

Probab=96.20  E-value=0.063  Score=47.59  Aligned_cols=98  Identities=17%  Similarity=0.154  Sum_probs=62.0

Q ss_pred             CCCEEEEEcC-ChHHHHHHHHHHHcCCeEEEEeCCchhHHHHHHHc-CCCE-EecCCC-HHHHHHhc-CCccEEEEcCCC
Q 018067          183 PGMHVGVVGL-GGLGHVAVKFAKAMGVKVTVISTSPSKKSEAIERL-GADS-FLVSRD-QDEMQAAM-GTMDGIIDTVSA  257 (361)
Q Consensus       183 ~g~~vlV~Ga-g~vG~~a~~la~~~g~~vi~~~~~~~~~~~~~~~~-g~~~-vv~~~~-~~~~~~~~-~g~d~vid~~g~  257 (361)
                      .+.+|||+|+ |.+|..++..+...|.+|+++.++.++........ ++.. ..|..+ .+.+.+.. .++|+||.+.|.
T Consensus        16 ~~~~ilItGasG~iG~~l~~~L~~~g~~V~~~~R~~~~~~~~~~~~~~~~~~~~Dl~d~~~~l~~~~~~~~d~vi~~~g~   95 (251)
T PLN00141         16 KTKTVFVAGATGRTGKRIVEQLLAKGFAVKAGVRDVDKAKTSLPQDPSLQIVRADVTEGSDKLVEAIGDDSDAVICATGF   95 (251)
T ss_pred             cCCeEEEECCCcHHHHHHHHHHHhCCCEEEEEecCHHHHHHhcccCCceEEEEeeCCCCHHHHHHHhhcCCCEEEECCCC
Confidence            4678999997 99999999998888999999888876543332111 2221 124444 23333333 589999998775


Q ss_pred             cc-------------cHHHHHhcccc--CCEEEEecCC
Q 018067          258 VH-------------PLMPLIGLLKS--QGKLVLVGAP  280 (361)
Q Consensus       258 ~~-------------~~~~~~~~l~~--~G~~v~~g~~  280 (361)
                      ..             .....++.++.  .++++.++..
T Consensus        96 ~~~~~~~~~~~~n~~~~~~ll~a~~~~~~~~iV~iSS~  133 (251)
T PLN00141         96 RRSFDPFAPWKVDNFGTVNLVEACRKAGVTRFILVSSI  133 (251)
T ss_pred             CcCCCCCCceeeehHHHHHHHHHHHHcCCCEEEEEccc
Confidence            21             12334444433  3688888764

>PRK12937 short chain dehydrogenase; Provisional

Probab=96.20  E-value=0.1  Score=45.77  Aligned_cols=98  Identities=17%  Similarity=0.227  Sum_probs=62.4

Q ss_pred             CCCEEEEEcC-ChHHHHHHHHHHHcCCeEEEEeCCchh-HHHHH---HHcCCC-E--EecCCCHHHHHHh-------cCC
Q 018067          183 PGMHVGVVGL-GGLGHVAVKFAKAMGVKVTVISTSPSK-KSEAI---ERLGAD-S--FLVSRDQDEMQAA-------MGT  247 (361)
Q Consensus       183 ~g~~vlV~Ga-g~vG~~a~~la~~~g~~vi~~~~~~~~-~~~~~---~~~g~~-~--vv~~~~~~~~~~~-------~~g  247 (361)
                      ++.+++|+|+ |.+|...+..+...|++++++.++.+. ...+.   +..+.. .  ..|..+.+.+.+.       .++
T Consensus         4 ~~~~vlItG~~~~iG~~la~~l~~~g~~v~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~Dl~~~~~~~~~~~~~~~~~~~   83 (245)
T PRK12937          4 SNKVAIVTGASRGIGAAIARRLAADGFAVAVNYAGSAAAADELVAEIEAAGGRAIAVQADVADAAAVTRLFDAAETAFGR   83 (245)
T ss_pred             CCCEEEEeCCCchHHHHHHHHHHHCCCEEEEecCCCHHHHHHHHHHHHhcCCeEEEEECCCCCHHHHHHHHHHHHHHcCC
Confidence            5678999997 999999999999999999887765432 22222   223332 1  2244454433322       247


Q ss_pred             ccEEEEcCCCcc-------------------------cHHHHHhccccCCEEEEecCC
Q 018067          248 MDGIIDTVSAVH-------------------------PLMPLIGLLKSQGKLVLVGAP  280 (361)
Q Consensus       248 ~d~vid~~g~~~-------------------------~~~~~~~~l~~~G~~v~~g~~  280 (361)
                      +|++|.++|...                         .++.++..++.+|+++.++..
T Consensus        84 id~vi~~ag~~~~~~~~~~~~~~~~~~~~~n~~~~~~~~~~~~~~~~~~~~iv~~ss~  141 (245)
T PRK12937         84 IDVLVNNAGVMPLGTIADFDLEDFDRTIATNLRGAFVVLREAARHLGQGGRIINLSTS  141 (245)
T ss_pred             CCEEEECCCCCCCCChhhCCHHHHHHHHhhhchHHHHHHHHHHHHhccCcEEEEEeec
Confidence            999999988421                         122344455667899988753

>PRK08017 oxidoreductase; Provisional

Probab=96.20  E-value=0.04  Score=48.78  Aligned_cols=72  Identities=19%  Similarity=0.296  Sum_probs=52.0

Q ss_pred             CEEEEEcC-ChHHHHHHHHHHHcCCeEEEEeCCchhHHHHHHHcCCCE-EecCCCHHHHH----Hh---c-CCccEEEEc
Q 018067          185 MHVGVVGL-GGLGHVAVKFAKAMGVKVTVISTSPSKKSEAIERLGADS-FLVSRDQDEMQ----AA---M-GTMDGIIDT  254 (361)
Q Consensus       185 ~~vlV~Ga-g~vG~~a~~la~~~g~~vi~~~~~~~~~~~~~~~~g~~~-vv~~~~~~~~~----~~---~-~g~d~vid~  254 (361)
                      ++++|.|+ |.+|..+++.+...|++|++++++.++.+.+ ++.++.. ..|..+.+.+.    .+   . +++|.++.+
T Consensus         3 k~vlVtGasg~IG~~la~~l~~~g~~v~~~~r~~~~~~~~-~~~~~~~~~~D~~~~~~~~~~~~~i~~~~~~~~~~ii~~   81 (256)
T PRK08017          3 KSVLITGCSSGIGLEAALELKRRGYRVLAACRKPDDVARM-NSLGFTGILLDLDDPESVERAADEVIALTDNRLYGLFNN   81 (256)
T ss_pred             CEEEEECCCChHHHHHHHHHHHCCCEEEEEeCCHHHhHHH-HhCCCeEEEeecCCHHHHHHHHHHHHHhcCCCCeEEEEC
Confidence            57999998 9999999999999999999999988776555 4556543 23444543322    21   2 468999998


Q ss_pred             CCC
Q 018067          255 VSA  257 (361)
Q Consensus       255 ~g~  257 (361)
                      .|.
T Consensus        82 ag~   84 (256)
T PRK08017         82 AGF   84 (256)
T ss_pred             CCC
Confidence            874

>PRK07904 short chain dehydrogenase; Provisional

Probab=96.19  E-value=0.027  Score=50.04  Aligned_cols=77  Identities=17%  Similarity=0.215  Sum_probs=51.9

Q ss_pred             CCCCCEEEEEcC-ChHHHHHHHHHHHc-CCeEEEEeCCchh-HHHHHHHc---CC-C-EE--ecCCCHHH----HHHhc-
Q 018067          181 DKPGMHVGVVGL-GGLGHVAVKFAKAM-GVKVTVISTSPSK-KSEAIERL---GA-D-SF--LVSRDQDE----MQAAM-  245 (361)
Q Consensus       181 ~~~g~~vlV~Ga-g~vG~~a~~la~~~-g~~vi~~~~~~~~-~~~~~~~~---g~-~-~v--v~~~~~~~----~~~~~-  245 (361)
                      +..+++|||.|+ |++|...++.+... |++|++++++.++ ...+.+++   +. + .+  .|..+++.    ++++. 
T Consensus         5 ~~~~~~vlItGas~giG~~la~~l~~~gg~~V~~~~r~~~~~~~~~~~~l~~~~~~~v~~~~~D~~~~~~~~~~~~~~~~   84 (253)
T PRK07904          5 VGNPQTILLLGGTSEIGLAICERYLKNAPARVVLAALPDDPRRDAAVAQMKAAGASSVEVIDFDALDTDSHPKVIDAAFA   84 (253)
T ss_pred             cCCCcEEEEEcCCcHHHHHHHHHHHhcCCCeEEEEeCCcchhHHHHHHHHHhcCCCceEEEEecCCChHHHHHHHHHHHh
Confidence            467889999998 99999999887766 5899999998775 44443433   32 1 12  34444332    22222 


Q ss_pred             -CCccEEEEcCCC
Q 018067          246 -GTMDGIIDTVSA  257 (361)
Q Consensus       246 -~g~d~vid~~g~  257 (361)
                       ++.|++|.++|.
T Consensus        85 ~g~id~li~~ag~   97 (253)
T PRK07904         85 GGDVDVAIVAFGL   97 (253)
T ss_pred             cCCCCEEEEeeec
Confidence             479999988875

>cd05211 NAD_bind_Glu_Leu_Phe_Val NAD(P) binding domain of glutamate dehydrogenase, leucine dehydrogenase, phenylalanine dehydrogenase, and valine dehydrogenase

Probab=96.19  E-value=0.12  Score=44.88  Aligned_cols=44  Identities=30%  Similarity=0.395  Sum_probs=35.5

Q ss_pred             hhhcCCCCCCCEEEEEcCChHHHHHHHHHHHcCCeEEEEeCCch
Q 018067          175 LRFYGLDKPGMHVGVVGLGGLGHVAVKFAKAMGVKVTVISTSPS  218 (361)
Q Consensus       175 l~~~~~~~~g~~vlV~Gag~vG~~a~~la~~~g~~vi~~~~~~~  218 (361)
                      +++...--.|.+|+|.|.|.+|..+++++...|++++.+.+++.
T Consensus        14 ~~~~~~~l~g~~vaIqGfGnVG~~~a~~L~~~G~~vV~vsD~~g   57 (217)
T cd05211          14 MKHLGDSLEGLTVAVQGLGNVGWGLAKKLAEEGGKVLAVSDPDG   57 (217)
T ss_pred             HHHcCCCcCCCEEEEECCCHHHHHHHHHHHHcCCEEEEEEcCCC
Confidence            34443224689999999999999999999999998888777665

Amino acid dehydrogenase (DH) is a widely distributed family of enzymes that catalyzes the oxidative deamination of an amino acid to its keto acid and ammonia with concomitant reduction of NAD(P)+. This subfamily includes glutamate, leucine, phenylalanine, and valine DHs. Glutamate DH is a multi-domain enzyme that catalyzes the reaction from glutamate to 2-oxyoglutarate and ammonia in the presence of NAD or NADP. It is present in all organisms. Enzymes involved in ammonia assimilation are typically NADP+-dependent, while those involved in glutamate catabolism are generally NAD+-dependent. As in other NAD+-dependent DHs, monomers in this family have 2 domains separated by a deep cleft. Here the c-terminal domain contains a modified NAD-binding Rossmann fold with 7 rather than the usual 6 beta strands and one strand anti-parral

>PRK08291 ectoine utilization protein EutC; Validated

Probab=96.18  E-value=0.061  Score=49.91  Aligned_cols=103  Identities=18%  Similarity=0.276  Sum_probs=67.8

Q ss_pred             CCCCEEEEEcCChHHHHHHHHHHH-cCC-eEEEEeCCchhHHHHHHHc----CCCEEecCCCHHHHHHhcCCccEEEEcC
Q 018067          182 KPGMHVGVVGLGGLGHVAVKFAKA-MGV-KVTVISTSPSKKSEAIERL----GADSFLVSRDQDEMQAAMGTMDGIIDTV  255 (361)
Q Consensus       182 ~~g~~vlV~Gag~vG~~a~~la~~-~g~-~vi~~~~~~~~~~~~~~~~----g~~~vv~~~~~~~~~~~~~g~d~vid~~  255 (361)
                      +...+++|+|+|..|.+.+..+.. .+. +|.+..++.++.+.+++++    |.. +....+   ..+.....|+|+.++
T Consensus       130 ~~~~~v~IiGaG~~a~~~~~al~~~~~~~~V~v~~R~~~~a~~l~~~~~~~~g~~-v~~~~d---~~~al~~aDiVi~aT  205 (330)
T PRK08291        130 EDASRAAVIGAGEQARLQLEALTLVRPIREVRVWARDAAKAEAYAADLRAELGIP-VTVARD---VHEAVAGADIIVTTT  205 (330)
T ss_pred             CCCCEEEEECCCHHHHHHHHHHHhcCCCCEEEEEcCCHHHHHHHHHHHhhccCce-EEEeCC---HHHHHccCCEEEEee
Confidence            456789999999999988777764 565 7888899988888777755    332 222222   233345789999998


Q ss_pred             CCcccHHHHHhccccCCEEEEecCCC-CCcccChH
Q 018067          256 SAVHPLMPLIGLLKSQGKLVLVGAPE-KPLELPAF  289 (361)
Q Consensus       256 g~~~~~~~~~~~l~~~G~~v~~g~~~-~~~~~~~~  289 (361)
                      .....+-. ...++++-.+..+|... .+-+++..
T Consensus       206 ~s~~p~i~-~~~l~~g~~v~~vg~d~~~~rEld~~  239 (330)
T PRK08291        206 PSEEPILK-AEWLHPGLHVTAMGSDAEHKNEIAPA  239 (330)
T ss_pred             CCCCcEec-HHHcCCCceEEeeCCCCCCcccCCHH
Confidence            87542222 23477777788887643 23344443

>TIGR03589 PseB UDP-N-acetylglucosamine 4,6-dehydratase

Probab=96.18  E-value=0.038  Score=51.14  Aligned_cols=75  Identities=16%  Similarity=0.181  Sum_probs=53.0

Q ss_pred             CCCEEEEEcC-ChHHHHHHHHHHHcC--CeEEEEeCCchhHHHHHHHcCC-C-E--EecCCCHHHHHHhcCCccEEEEcC
Q 018067          183 PGMHVGVVGL-GGLGHVAVKFAKAMG--VKVTVISTSPSKKSEAIERLGA-D-S--FLVSRDQDEMQAAMGTMDGIIDTV  255 (361)
Q Consensus       183 ~g~~vlV~Ga-g~vG~~a~~la~~~g--~~vi~~~~~~~~~~~~~~~~g~-~-~--vv~~~~~~~~~~~~~g~d~vid~~  255 (361)
                      .|.+|||.|+ |.+|...+..+...|  .+|++++++..+...+.+.+.. . .  ..|..+.+.+.++..++|+||+++
T Consensus         3 ~~k~vLVTGatG~IG~~l~~~L~~~g~~~~V~~~~r~~~~~~~~~~~~~~~~~~~v~~Dl~d~~~l~~~~~~iD~Vih~A   82 (324)
T TIGR03589         3 NNKSILITGGTGSFGKAFISRLLENYNPKKIIIYSRDELKQWEMQQKFPAPCLRFFIGDVRDKERLTRALRGVDYVVHAA   82 (324)
T ss_pred             CCCEEEEeCCCCHHHHHHHHHHHHhCCCcEEEEEcCChhHHHHHHHHhCCCcEEEEEccCCCHHHHHHHHhcCCEEEECc
Confidence            3678999997 999999998887765  6888888766554444333321 1 1  225566666766667899999998


Q ss_pred             CC
Q 018067          256 SA  257 (361)
Q Consensus       256 g~  257 (361)
                      |.
T Consensus        83 g~   84 (324)
T TIGR03589        83 AL   84 (324)
T ss_pred             cc
Confidence            74

This enzyme catalyzes the first step in the biosynthesis of pseudaminic acid, the conversion of UDP-N-acetylglucosamine to UDP-4-keto-6-deoxy-N-acetylglucosamine. These sequences are members of the broader pfam01073 (3-beta hydroxysteroid dehydrogenase/isomerase family) family.

>PRK14172 bifunctional 5,10-methylene-tetrahydrofolate dehydrogenase/ 5,10-methylene-tetrahydrofolate cyclohydrolase; Provisional

Probab=96.18  E-value=0.054  Score=48.45  Aligned_cols=96  Identities=16%  Similarity=0.207  Sum_probs=74.0

Q ss_pred             ccchhhhhhhhHhhhcCCCCCCCEEEEEcC-ChHHHHHHHHHHHcCCeEEEEeCCchhHHHHHHHcCCCEEecCCCHHHH
Q 018067          163 PLLCAGITVYSPLRFYGLDKPGMHVGVVGL-GGLGHVAVKFAKAMGVKVTVISTSPSKKSEAIERLGADSFLVSRDQDEM  241 (361)
Q Consensus       163 ~l~~~~~ta~~~l~~~~~~~~g~~vlV~Ga-g~vG~~a~~la~~~g~~vi~~~~~~~~~~~~~~~~g~~~vv~~~~~~~~  241 (361)
                      .+||+..+.+..++...---.|++|+|+|. ..+|.=.+.++...|++|++..+....                     +
T Consensus       137 ~~PcTp~av~~lL~~~~i~l~Gk~vvViGrS~~VGkPla~lL~~~~AtVt~chs~T~~---------------------l  195 (278)
T PRK14172        137 FLPCTPNSVITLIKSLNIDIEGKEVVVIGRSNIVGKPVAQLLLNENATVTICHSKTKN---------------------L  195 (278)
T ss_pred             CcCCCHHHHHHHHHHhCCCCCCCEEEEECCCccchHHHHHHHHHCCCEEEEeCCCCCC---------------------H
Confidence            467777777777877664468999999996 889999999999999999877654322                     2


Q ss_pred             HHhcCCccEEEEcCCCcccHHHHHhccccCCEEEEecCCC
Q 018067          242 QAAMGTMDGIIDTVSAVHPLMPLIGLLKSQGKLVLVGAPE  281 (361)
Q Consensus       242 ~~~~~g~d~vid~~g~~~~~~~~~~~l~~~G~~v~~g~~~  281 (361)
                      .+.+..+|+++-++|.+..+  -.+.+++|..++.+|...
T Consensus       196 ~~~~~~ADIvIsAvGkp~~i--~~~~ik~gavVIDvGin~  233 (278)
T PRK14172        196 KEVCKKADILVVAIGRPKFI--DEEYVKEGAIVIDVGTSS  233 (278)
T ss_pred             HHHHhhCCEEEEcCCCcCcc--CHHHcCCCcEEEEeeccc
Confidence            23344589999999998843  356699999999998643

>PRK06720 hypothetical protein; Provisional

Probab=96.18  E-value=0.044  Score=45.53  Aligned_cols=75  Identities=20%  Similarity=0.275  Sum_probs=51.0

Q ss_pred             CCCEEEEEcC-ChHHHHHHHHHHHcCCeEEEEeCCchhHHHHHHHc---CCCE---EecCCCHHHHHH-------hcCCc
Q 018067          183 PGMHVGVVGL-GGLGHVAVKFAKAMGVKVTVISTSPSKKSEAIERL---GADS---FLVSRDQDEMQA-------AMGTM  248 (361)
Q Consensus       183 ~g~~vlV~Ga-g~vG~~a~~la~~~g~~vi~~~~~~~~~~~~~~~~---g~~~---vv~~~~~~~~~~-------~~~g~  248 (361)
                      .+.+++|.|+ +++|...+..+...|++|++++++.+......+++   +...   ..|..+.+.+.+       ..++.
T Consensus        15 ~gk~~lVTGa~~GIG~aia~~l~~~G~~V~l~~r~~~~~~~~~~~l~~~~~~~~~~~~Dl~~~~~v~~~v~~~~~~~G~i   94 (169)
T PRK06720         15 AGKVAIVTGGGIGIGRNTALLLAKQGAKVIVTDIDQESGQATVEEITNLGGEALFVSYDMEKQGDWQRVISITLNAFSRI   94 (169)
T ss_pred             CCCEEEEecCCChHHHHHHHHHHHCCCEEEEEECCHHHHHHHHHHHHhcCCcEEEEEccCCCHHHHHHHHHHHHHHcCCC
Confidence            5778999997 88999999999889999999998766554433332   4321   234444333222       12478


Q ss_pred             cEEEEcCCC
Q 018067          249 DGIIDTVSA  257 (361)
Q Consensus       249 d~vid~~g~  257 (361)
                      |++|+++|.
T Consensus        95 DilVnnAG~  103 (169)
T PRK06720         95 DMLFQNAGL  103 (169)
T ss_pred             CEEEECCCc
Confidence            999998884

>PF03807 F420_oxidored: NADP oxidoreductase coenzyme F420-dependent; InterPro: IPR004455 The function of F420-dependent NADP reductase is the transfer of electrons from reduced coenzyme F420 into an electron transport chain

Probab=96.17  E-value=0.092  Score=38.87  Aligned_cols=86  Identities=21%  Similarity=0.356  Sum_probs=60.2

Q ss_pred             EEEEEcCChHHHHHHHHHHHcC---CeEEEE-eCCchhHHHHHHHcCCCEEecCCCHHHHHHhcCCccEEEEcCCCcccH
Q 018067          186 HVGVVGLGGLGHVAVKFAKAMG---VKVTVI-STSPSKKSEAIERLGADSFLVSRDQDEMQAAMGTMDGIIDTVSAVHPL  261 (361)
Q Consensus       186 ~vlV~Gag~vG~~a~~la~~~g---~~vi~~-~~~~~~~~~~~~~~g~~~vv~~~~~~~~~~~~~g~d~vid~~g~~~~~  261 (361)
                      +|.|+|+|.+|.+.+.-+...|   .+++++ .+++++..++.++++..... .+..+.+    ...|+||-|+--.. +
T Consensus         1 kI~iIG~G~mg~al~~~l~~~g~~~~~v~~~~~r~~~~~~~~~~~~~~~~~~-~~~~~~~----~~advvilav~p~~-~   74 (96)
T PF03807_consen    1 KIGIIGAGNMGSALARGLLASGIKPHEVIIVSSRSPEKAAELAKEYGVQATA-DDNEEAA----QEADVVILAVKPQQ-L   74 (96)
T ss_dssp             EEEEESTSHHHHHHHHHHHHTTS-GGEEEEEEESSHHHHHHHHHHCTTEEES-EEHHHHH----HHTSEEEE-S-GGG-H
T ss_pred             CEEEECCCHHHHHHHHHHHHCCCCceeEEeeccCcHHHHHHHHHhhcccccc-CChHHhh----ccCCEEEEEECHHH-H
Confidence            4778899999999999999999   789855 89999999998888865432 1222222    26899999998766 4


Q ss_pred             HHHHhc---cccCCEEEEe
Q 018067          262 MPLIGL---LKSQGKLVLV  277 (361)
Q Consensus       262 ~~~~~~---l~~~G~~v~~  277 (361)
                      ...++.   ..++..++.+
T Consensus        75 ~~v~~~i~~~~~~~~vis~   93 (96)
T PF03807_consen   75 PEVLSEIPHLLKGKLVISI   93 (96)
T ss_dssp             HHHHHHHHHHHTTSEEEEE
T ss_pred             HHHHHHHhhccCCCEEEEe
Confidence            544443   3455666654

It catalyses the reduction of F420 with NADP(+) and the reduction of NADP(+) with F420H(2).; GO: 0016491 oxidoreductase activity, 0055114 oxidation-reduction process; PDB: 2IZZ_B 2GR9_B 2GRA_B 2GER_C 2AMF_E 2AHR_C 2VQ3_B 2VNS_B 2RCY_D 2YJZ_D ....

>PRK08177 short chain dehydrogenase; Provisional

Probab=96.16  E-value=0.03  Score=48.62  Aligned_cols=72  Identities=18%  Similarity=0.184  Sum_probs=50.7

Q ss_pred             CEEEEEcC-ChHHHHHHHHHHHcCCeEEEEeCCchhHHHHHHHcC-CC-EEecCCCHHHHHHh----c-CCccEEEEcCC
Q 018067          185 MHVGVVGL-GGLGHVAVKFAKAMGVKVTVISTSPSKKSEAIERLG-AD-SFLVSRDQDEMQAA----M-GTMDGIIDTVS  256 (361)
Q Consensus       185 ~~vlV~Ga-g~vG~~a~~la~~~g~~vi~~~~~~~~~~~~~~~~g-~~-~vv~~~~~~~~~~~----~-~g~d~vid~~g  256 (361)
                      ++++|.|+ |.+|...+..+...|++|++++++.++...+ ++++ .. ...|-.+.+.++.+    . +++|++|.++|
T Consensus         2 k~vlItG~sg~iG~~la~~l~~~G~~V~~~~r~~~~~~~~-~~~~~~~~~~~D~~d~~~~~~~~~~~~~~~id~vi~~ag   80 (225)
T PRK08177          2 RTALIIGASRGLGLGLVDRLLERGWQVTATVRGPQQDTAL-QALPGVHIEKLDMNDPASLDQLLQRLQGQRFDLLFVNAG   80 (225)
T ss_pred             CEEEEeCCCchHHHHHHHHHHhCCCEEEEEeCCCcchHHH-HhccccceEEcCCCCHHHHHHHHHHhhcCCCCEEEEcCc
Confidence            46899997 9999999999989999999999988765554 3333 21 22344554433332    2 36999999886


Q ss_pred             C
Q 018067          257 A  257 (361)
Q Consensus       257 ~  257 (361)
                      .
T Consensus        81 ~   81 (225)
T PRK08177         81 I   81 (225)
T ss_pred             c
Confidence            5

>PRK14982 acyl-ACP reductase; Provisional

Probab=96.16  E-value=0.044  Score=50.67  Aligned_cols=94  Identities=20%  Similarity=0.265  Sum_probs=66.9

Q ss_pred             CCCCEEEEEcC-ChHHHHHHHHHHH-cCC-eEEEEeCCchhHHHHHHHcCCCEEecCCCHHHHHHhcCCccEEEEcCCCc
Q 018067          182 KPGMHVGVVGL-GGLGHVAVKFAKA-MGV-KVTVISTSPSKKSEAIERLGADSFLVSRDQDEMQAAMGTMDGIIDTVSAV  258 (361)
Q Consensus       182 ~~g~~vlV~Ga-g~vG~~a~~la~~-~g~-~vi~~~~~~~~~~~~~~~~g~~~vv~~~~~~~~~~~~~g~d~vid~~g~~  258 (361)
                      -.+++|+|+|+ |.+|..++..+.. .|. +++++.++.++...+.++++...+      ..+.+....+|+|+.+++.+
T Consensus       153 l~~k~VLVtGAtG~IGs~lar~L~~~~gv~~lilv~R~~~rl~~La~el~~~~i------~~l~~~l~~aDiVv~~ts~~  226 (340)
T PRK14982        153 LSKATVAVVGATGDIGSAVCRWLDAKTGVAELLLVARQQERLQELQAELGGGKI------LSLEEALPEADIVVWVASMP  226 (340)
T ss_pred             cCCCEEEEEccChHHHHHHHHHHHhhCCCCEEEEEcCCHHHHHHHHHHhccccH------HhHHHHHccCCEEEECCcCC
Confidence            46789999998 8999999888864 565 888888888777777666642211      12334445799999999986


Q ss_pred             ccHHHHHhccccCCEEEEecCCC
Q 018067          259 HPLMPLIGLLKSQGKLVLVGAPE  281 (361)
Q Consensus       259 ~~~~~~~~~l~~~G~~v~~g~~~  281 (361)
                      ..+..-...++++-.+++++.+.
T Consensus       227 ~~~~I~~~~l~~~~~viDiAvPR  249 (340)
T PRK14982        227 KGVEIDPETLKKPCLMIDGGYPK  249 (340)
T ss_pred             cCCcCCHHHhCCCeEEEEecCCC
Confidence            54322234557778888888764

>PRK14179 bifunctional 5,10-methylene-tetrahydrofolate dehydrogenase/ 5,10-methylene-tetrahydrofolate cyclohydrolase; Provisional

Probab=96.15  E-value=0.046  Score=49.09  Aligned_cols=95  Identities=16%  Similarity=0.240  Sum_probs=73.0

Q ss_pred             ccchhhhhhhhHhhhcCCCCCCCEEEEEcC-ChHHHHHHHHHHHcCCeEEEEeCCchhHHHHHHHcCCCEEecCCCHHHH
Q 018067          163 PLLCAGITVYSPLRFYGLDKPGMHVGVVGL-GGLGHVAVKFAKAMGVKVTVISTSPSKKSEAIERLGADSFLVSRDQDEM  241 (361)
Q Consensus       163 ~l~~~~~ta~~~l~~~~~~~~g~~vlV~Ga-g~vG~~a~~la~~~g~~vi~~~~~~~~~~~~~~~~g~~~vv~~~~~~~~  241 (361)
                      ..||+..+....++...---.|++|.|+|. +.+|.-.+.++...|++|++..+..+                     .+
T Consensus       137 ~~PcTp~avi~lL~~~~i~l~Gk~v~vIG~S~ivG~Pla~lL~~~gatVtv~~s~t~---------------------~l  195 (284)
T PRK14179        137 MIPCTPAGIMEMFREYNVELEGKHAVVIGRSNIVGKPMAQLLLDKNATVTLTHSRTR---------------------NL  195 (284)
T ss_pred             CcCCCHHHHHHHHHHhCCCCCCCEEEEECCCCcCcHHHHHHHHHCCCEEEEECCCCC---------------------CH
Confidence            467777777777877764468999999997 99999999999999999987633221                     12


Q ss_pred             HHhcCCccEEEEcCCCcccHHHHHhccccCCEEEEecCC
Q 018067          242 QAAMGTMDGIIDTVSAVHPLMPLIGLLKSQGKLVLVGAP  280 (361)
Q Consensus       242 ~~~~~g~d~vid~~g~~~~~~~~~~~l~~~G~~v~~g~~  280 (361)
                      .+....+|+||-++|.+..+...  .+++|..++.+|..
T Consensus       196 ~~~~~~ADIVI~avg~~~~v~~~--~ik~GavVIDvgin  232 (284)
T PRK14179        196 AEVARKADILVVAIGRGHFVTKE--FVKEGAVVIDVGMN  232 (284)
T ss_pred             HHHHhhCCEEEEecCccccCCHH--HccCCcEEEEecce
Confidence            33445689999999998855554  48999999999864

>PRK14177 bifunctional 5,10-methylene-tetrahydrofolate dehydrogenase/ 5,10-methylene-tetrahydrofolate cyclohydrolase; Provisional

Probab=96.15  E-value=0.053  Score=48.62  Aligned_cols=97  Identities=21%  Similarity=0.213  Sum_probs=75.0

Q ss_pred             cccchhhhhhhhHhhhcCCCCCCCEEEEEcC-ChHHHHHHHHHHHcCCeEEEEeCCchhHHHHHHHcCCCEEecCCCHHH
Q 018067          162 APLLCAGITVYSPLRFYGLDKPGMHVGVVGL-GGLGHVAVKFAKAMGVKVTVISTSPSKKSEAIERLGADSFLVSRDQDE  240 (361)
Q Consensus       162 a~l~~~~~ta~~~l~~~~~~~~g~~vlV~Ga-g~vG~~a~~la~~~g~~vi~~~~~~~~~~~~~~~~g~~~vv~~~~~~~  240 (361)
                      ..+||+..+.+..++...---.|++|+|+|. ..+|.-.+.++...|++|++..+.....                    
T Consensus       137 ~~~PcTp~avi~ll~~y~i~l~Gk~vvViGrS~iVGkPla~lL~~~~atVt~chs~T~~l--------------------  196 (284)
T PRK14177        137 TYLPCTPYGMVLLLKEYGIDVTGKNAVVVGRSPILGKPMAMLLTEMNATVTLCHSKTQNL--------------------  196 (284)
T ss_pred             CCCCCCHHHHHHHHHHhCCCCCCCEEEEECCCCcchHHHHHHHHHCCCEEEEeCCCCCCH--------------------
Confidence            3467777777777777664468999999996 8899999999999999998876543322                    


Q ss_pred             HHHhcCCccEEEEcCCCcccHHHHHhccccCCEEEEecCCC
Q 018067          241 MQAAMGTMDGIIDTVSAVHPLMPLIGLLKSQGKLVLVGAPE  281 (361)
Q Consensus       241 ~~~~~~g~d~vid~~g~~~~~~~~~~~l~~~G~~v~~g~~~  281 (361)
                       ++.+..+|+++-++|.+..  --.+.+++|..++++|...
T Consensus       197 -~~~~~~ADIvIsAvGk~~~--i~~~~ik~gavVIDvGin~  234 (284)
T PRK14177        197 -PSIVRQADIIVGAVGKPEF--IKADWISEGAVLLDAGYNP  234 (284)
T ss_pred             -HHHHhhCCEEEEeCCCcCc--cCHHHcCCCCEEEEecCcc
Confidence             2334468999999999883  3367899999999999743

>PRK06841 short chain dehydrogenase; Provisional

Probab=96.13  E-value=0.045  Score=48.45  Aligned_cols=74  Identities=23%  Similarity=0.370  Sum_probs=51.2

Q ss_pred             CCCEEEEEcC-ChHHHHHHHHHHHcCCeEEEEeCCchhHHHHHHHcCC-C---EEecCCCHHHHHHh-------cCCccE
Q 018067          183 PGMHVGVVGL-GGLGHVAVKFAKAMGVKVTVISTSPSKKSEAIERLGA-D---SFLVSRDQDEMQAA-------MGTMDG  250 (361)
Q Consensus       183 ~g~~vlV~Ga-g~vG~~a~~la~~~g~~vi~~~~~~~~~~~~~~~~g~-~---~vv~~~~~~~~~~~-------~~g~d~  250 (361)
                      .++++||.|+ |.+|..+++.+...|++|++++++.+.. ...+++.. .   ...|..+++.+..+       .+++|+
T Consensus        14 ~~k~vlItGas~~IG~~la~~l~~~G~~Vi~~~r~~~~~-~~~~~~~~~~~~~~~~Dl~~~~~~~~~~~~~~~~~~~~d~   92 (255)
T PRK06841         14 SGKVAVVTGGASGIGHAIAELFAAKGARVALLDRSEDVA-EVAAQLLGGNAKGLVCDVSDSQSVEAAVAAVISAFGRIDI   92 (255)
T ss_pred             CCCEEEEECCCChHHHHHHHHHHHCCCEEEEEeCCHHHH-HHHHHhhCCceEEEEecCCCHHHHHHHHHHHHHHhCCCCE
Confidence            4778999998 9999999999999999999998876543 33233322 1   12344554433322       247899


Q ss_pred             EEEcCCC
Q 018067          251 IIDTVSA  257 (361)
Q Consensus       251 vid~~g~  257 (361)
                      +|.++|.
T Consensus        93 vi~~ag~   99 (255)
T PRK06841         93 LVNSAGV   99 (255)
T ss_pred             EEECCCC
Confidence            9999985

>PRK06603 enoyl-(acyl carrier protein) reductase; Provisional

Probab=96.12  E-value=0.043  Score=48.96  Aligned_cols=75  Identities=15%  Similarity=0.225  Sum_probs=50.1

Q ss_pred             CCCEEEEEcC-C--hHHHHHHHHHHHcCCeEEEEeCCch---hHHHHHHHcCCCE--EecCCCHHHHHHh-------cCC
Q 018067          183 PGMHVGVVGL-G--GLGHVAVKFAKAMGVKVTVISTSPS---KKSEAIERLGADS--FLVSRDQDEMQAA-------MGT  247 (361)
Q Consensus       183 ~g~~vlV~Ga-g--~vG~~a~~la~~~g~~vi~~~~~~~---~~~~~~~~~g~~~--vv~~~~~~~~~~~-------~~g  247 (361)
                      .|++++|.|+ +  ++|.++++.+...|++|++..++++   ...++.++.|...  ..|-.+++.+.++       .+.
T Consensus         7 ~~k~~lITGas~~~GIG~a~a~~la~~G~~v~~~~r~~~~~~~~~~l~~~~g~~~~~~~Dv~~~~~v~~~~~~~~~~~g~   86 (260)
T PRK06603          7 QGKKGLITGIANNMSISWAIAQLAKKHGAELWFTYQSEVLEKRVKPLAEEIGCNFVSELDVTNPKSISNLFDDIKEKWGS   86 (260)
T ss_pred             CCcEEEEECCCCCcchHHHHHHHHHHcCCEEEEEeCchHHHHHHHHHHHhcCCceEEEccCCCHHHHHHHHHHHHHHcCC
Confidence            5788999997 4  7999999988889999998877632   2333333445332  2455565443332       246


Q ss_pred             ccEEEEcCCC
Q 018067          248 MDGIIDTVSA  257 (361)
Q Consensus       248 ~d~vid~~g~  257 (361)
                      +|++++++|.
T Consensus        87 iDilVnnag~   96 (260)
T PRK06603         87 FDFLLHGMAF   96 (260)
T ss_pred             ccEEEEcccc
Confidence            9999998874

>PRK06823 ornithine cyclodeaminase; Validated

Probab=96.12  E-value=0.15  Score=46.86  Aligned_cols=109  Identities=18%  Similarity=0.173  Sum_probs=74.0

Q ss_pred             hhcCCCCCCCEEEEEcCChHHHHHHHHHHHc-CC-eEEEEeCCchhHHHHHHHc---CCCEEecCCCHHHHHHhcCCccE
Q 018067          176 RFYGLDKPGMHVGVVGLGGLGHVAVKFAKAM-GV-KVTVISTSPSKKSEAIERL---GADSFLVSRDQDEMQAAMGTMDG  250 (361)
Q Consensus       176 ~~~~~~~~g~~vlV~Gag~vG~~a~~la~~~-g~-~vi~~~~~~~~~~~~~~~~---g~~~vv~~~~~~~~~~~~~g~d~  250 (361)
                      +..++ +..+++.|+|+|..+...++.+... .. +|.+..++.++...+++.+   +.+..+ .   +..++...+.|+
T Consensus       121 ~~La~-~d~~~l~iiG~G~qA~~~~~a~~~v~~i~~v~v~~r~~~~a~~~~~~~~~~~~~v~~-~---~~~~~av~~ADI  195 (315)
T PRK06823        121 RLLAP-QHVSAIGIVGTGIQARMQLMYLKNVTDCRQLWVWGRSETALEEYRQYAQALGFAVNT-T---LDAAEVAHAANL  195 (315)
T ss_pred             HHhcC-CCCCEEEEECCcHHHHHHHHHHHhcCCCCEEEEECCCHHHHHHHHHHHHhcCCcEEE-E---CCHHHHhcCCCE
Confidence            33443 5678889999999998888877653 44 8999999988877665544   333211 1   223455578999


Q ss_pred             EEEcCCCcccHHHHHhccccCCEEEEecCCCC-CcccChHH
Q 018067          251 IIDTVSAVHPLMPLIGLLKSQGKLVLVGAPEK-PLELPAFS  290 (361)
Q Consensus       251 vid~~g~~~~~~~~~~~l~~~G~~v~~g~~~~-~~~~~~~~  290 (361)
                      |+-++++...+ .-.+.+++|-.+..+|.... .-+++...
T Consensus       196 V~taT~s~~P~-~~~~~l~~G~hi~~iGs~~p~~~Eld~~~  235 (315)
T PRK06823        196 IVTTTPSREPL-LQAEDIQPGTHITAVGADSPGKQELDAEL  235 (315)
T ss_pred             EEEecCCCCce-eCHHHcCCCcEEEecCCCCcccccCCHHH
Confidence            99988775522 23457899999999997643 34555443

>PRK08277 D-mannonate oxidoreductase; Provisional

Probab=96.12  E-value=0.038  Score=49.68  Aligned_cols=75  Identities=21%  Similarity=0.340  Sum_probs=53.0

Q ss_pred             CCCEEEEEcC-ChHHHHHHHHHHHcCCeEEEEeCCchhHHHHHHHc---CCCE---EecCCCHHHHHHh-------cCCc
Q 018067          183 PGMHVGVVGL-GGLGHVAVKFAKAMGVKVTVISTSPSKKSEAIERL---GADS---FLVSRDQDEMQAA-------MGTM  248 (361)
Q Consensus       183 ~g~~vlV~Ga-g~vG~~a~~la~~~g~~vi~~~~~~~~~~~~~~~~---g~~~---vv~~~~~~~~~~~-------~~g~  248 (361)
                      .+++++|.|+ |++|..++..+...|++|++++++.++...+.+++   +.+.   ..|..+++.+..+       .+++
T Consensus         9 ~~k~vlVtGas~giG~~ia~~l~~~G~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~Dl~~~~~v~~~~~~~~~~~g~i   88 (278)
T PRK08277          9 KGKVAVITGGGGVLGGAMAKELARAGAKVAILDRNQEKAEAVVAEIKAAGGEALAVKADVLDKESLEQARQQILEDFGPC   88 (278)
T ss_pred             CCCEEEEeCCCchHHHHHHHHHHHCCCEEEEEeCCHHHHHHHHHHHHhcCCeEEEEECCCCCHHHHHHHHHHHHHHcCCC
Confidence            4688999997 99999999999999999999998876655554433   3221   2344444433322       2479


Q ss_pred             cEEEEcCCC
Q 018067          249 DGIIDTVSA  257 (361)
Q Consensus       249 d~vid~~g~  257 (361)
                      |++|+++|.
T Consensus        89 d~li~~ag~   97 (278)
T PRK08277         89 DILINGAGG   97 (278)
T ss_pred             CEEEECCCC
Confidence            999999883

>PRK07069 short chain dehydrogenase; Validated

Probab=96.12  E-value=0.059  Score=47.49  Aligned_cols=71  Identities=18%  Similarity=0.294  Sum_probs=48.7

Q ss_pred             EEEEcC-ChHHHHHHHHHHHcCCeEEEEeCC-chhHHHHHHHcC----CC----EEecCCCHHHHHHh-------cCCcc
Q 018067          187 VGVVGL-GGLGHVAVKFAKAMGVKVTVISTS-PSKKSEAIERLG----AD----SFLVSRDQDEMQAA-------MGTMD  249 (361)
Q Consensus       187 vlV~Ga-g~vG~~a~~la~~~g~~vi~~~~~-~~~~~~~~~~~g----~~----~vv~~~~~~~~~~~-------~~g~d  249 (361)
                      ++|.|+ |.+|...++.+...|++|++++++ .++...+.+++.    ..    ...|..+++.+.++       .+++|
T Consensus         2 ilVtG~~~~iG~~~a~~l~~~G~~v~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~~~D~~~~~~~~~~~~~~~~~~~~id   81 (251)
T PRK07069          2 AFITGAAGGLGRAIARRMAEQGAKVFLTDINDAAGLDAFAAEINAAHGEGVAFAAVQDVTDEAQWQALLAQAADAMGGLS   81 (251)
T ss_pred             EEEECCCChHHHHHHHHHHHCCCEEEEEeCCcchHHHHHHHHHHhcCCCceEEEEEeecCCHHHHHHHHHHHHHHcCCcc
Confidence            788887 999999999998899999999987 554444443332    11    12245554433322       24789


Q ss_pred             EEEEcCCC
Q 018067          250 GIIDTVSA  257 (361)
Q Consensus       250 ~vid~~g~  257 (361)
                      ++|.++|.
T Consensus        82 ~vi~~ag~   89 (251)
T PRK07069         82 VLVNNAGV   89 (251)
T ss_pred             EEEECCCc
Confidence            99999884

>PRK12746 short chain dehydrogenase; Provisional

Probab=96.11  E-value=0.068  Score=47.25  Aligned_cols=75  Identities=16%  Similarity=0.211  Sum_probs=49.1

Q ss_pred             CCCEEEEEcC-ChHHHHHHHHHHHcCCeEEEE-eCCchhHHHHHHHc---CCCE---EecCCCHHHHHH----hc-----
Q 018067          183 PGMHVGVVGL-GGLGHVAVKFAKAMGVKVTVI-STSPSKKSEAIERL---GADS---FLVSRDQDEMQA----AM-----  245 (361)
Q Consensus       183 ~g~~vlV~Ga-g~vG~~a~~la~~~g~~vi~~-~~~~~~~~~~~~~~---g~~~---vv~~~~~~~~~~----~~-----  245 (361)
                      .+.+++|.|+ |.+|...++.+...|++|++. .++.++.....+++   +...   ..|-.+++.+..    +.     
T Consensus         5 ~~~~ilItGasg~iG~~la~~l~~~G~~v~i~~~r~~~~~~~~~~~~~~~~~~~~~~~~D~~d~~~i~~~~~~~~~~~~~   84 (254)
T PRK12746          5 DGKVALVTGASRGIGRAIAMRLANDGALVAIHYGRNKQAADETIREIESNGGKAFLIEADLNSIDGVKKLVEQLKNELQI   84 (254)
T ss_pred             CCCEEEEeCCCchHHHHHHHHHHHCCCEEEEEcCCCHHHHHHHHHHHHhcCCcEEEEEcCcCCHHHHHHHHHHHHHHhcc
Confidence            3578999997 999999999998899998775 46555444443333   2221   234555443322    11     


Q ss_pred             ----CCccEEEEcCCC
Q 018067          246 ----GTMDGIIDTVSA  257 (361)
Q Consensus       246 ----~g~d~vid~~g~  257 (361)
                          .++|++|.++|.
T Consensus        85 ~~~~~~id~vi~~ag~  100 (254)
T PRK12746         85 RVGTSEIDILVNNAGI  100 (254)
T ss_pred             ccCCCCccEEEECCCC
Confidence                258999999875

>PRK06197 short chain dehydrogenase; Provisional

Probab=96.10  E-value=0.024  Score=51.94  Aligned_cols=76  Identities=26%  Similarity=0.296  Sum_probs=52.6

Q ss_pred             CCCCEEEEEcC-ChHHHHHHHHHHHcCCeEEEEeCCchhHHHHHHHc-----CCC---EEecCCCHHHHHHh-------c
Q 018067          182 KPGMHVGVVGL-GGLGHVAVKFAKAMGVKVTVISTSPSKKSEAIERL-----GAD---SFLVSRDQDEMQAA-------M  245 (361)
Q Consensus       182 ~~g~~vlV~Ga-g~vG~~a~~la~~~g~~vi~~~~~~~~~~~~~~~~-----g~~---~vv~~~~~~~~~~~-------~  245 (361)
                      ..+++|+|.|+ |++|..+++.+...|++|++++++.++.....+++     +..   ...|..+.+.+.++       .
T Consensus        14 ~~~k~vlItGas~gIG~~~a~~l~~~G~~vi~~~r~~~~~~~~~~~l~~~~~~~~~~~~~~Dl~d~~~v~~~~~~~~~~~   93 (306)
T PRK06197         14 QSGRVAVVTGANTGLGYETAAALAAKGAHVVLAVRNLDKGKAAAARITAATPGADVTLQELDLTSLASVRAAADALRAAY   93 (306)
T ss_pred             CCCCEEEEcCCCCcHHHHHHHHHHHCCCEEEEEeCCHHHHHHHHHHHHHhCCCCceEEEECCCCCHHHHHHHHHHHHhhC
Confidence            36789999997 99999999999889999999998876654433322     111   12344554433332       2


Q ss_pred             CCccEEEEcCCC
Q 018067          246 GTMDGIIDTVSA  257 (361)
Q Consensus       246 ~g~d~vid~~g~  257 (361)
                      +++|++|+++|.
T Consensus        94 ~~iD~li~nAg~  105 (306)
T PRK06197         94 PRIDLLINNAGV  105 (306)
T ss_pred             CCCCEEEECCcc
Confidence            469999999974

>PRK07533 enoyl-(acyl carrier protein) reductase; Provisional

Probab=96.09  E-value=0.052  Score=48.35  Aligned_cols=98  Identities=19%  Similarity=0.260  Sum_probs=63.9

Q ss_pred             CCCEEEEEcCC---hHHHHHHHHHHHcCCeEEEEeCCchh---HHHHHHHcCCCEE--ecCCCHHHHHHh-------cCC
Q 018067          183 PGMHVGVVGLG---GLGHVAVKFAKAMGVKVTVISTSPSK---KSEAIERLGADSF--LVSRDQDEMQAA-------MGT  247 (361)
Q Consensus       183 ~g~~vlV~Gag---~vG~~a~~la~~~g~~vi~~~~~~~~---~~~~~~~~g~~~v--v~~~~~~~~~~~-------~~g  247 (361)
                      .|+++||.|++   ++|.++++.+...|++|++++++++.   ..++.++++....  .|-.+.+.+.++       .+.
T Consensus         9 ~~k~~lItGas~g~GIG~a~a~~la~~G~~v~l~~r~~~~~~~~~~~~~~~~~~~~~~~D~~~~~~v~~~~~~~~~~~g~   88 (258)
T PRK07533          9 AGKRGLVVGIANEQSIAWGCARAFRALGAELAVTYLNDKARPYVEPLAEELDAPIFLPLDVREPGQLEAVFARIAEEWGR   88 (258)
T ss_pred             CCCEEEEECCCCCCcHHHHHHHHHHHcCCEEEEEeCChhhHHHHHHHHHhhccceEEecCcCCHHHHHHHHHHHHHHcCC
Confidence            57889999973   89999999999999999998887532   2344444443222  344444433322       247


Q ss_pred             ccEEEEcCCCcc-----------------------------cHHHHHhccccCCEEEEecCC
Q 018067          248 MDGIIDTVSAVH-----------------------------PLMPLIGLLKSQGKLVLVGAP  280 (361)
Q Consensus       248 ~d~vid~~g~~~-----------------------------~~~~~~~~l~~~G~~v~~g~~  280 (361)
                      +|++|+++|...                             ..+.++..++.+|+++.++..
T Consensus        89 ld~lv~nAg~~~~~~~~~~~~~~~~~~~~~~~~vN~~~~~~~~~~~~p~m~~~g~Ii~iss~  150 (258)
T PRK07533         89 LDFLLHSIAFAPKEDLHGRVVDCSREGFALAMDVSCHSFIRMARLAEPLMTNGGSLLTMSYY  150 (258)
T ss_pred             CCEEEEcCccCCcccccCCcccCCHHHHHHHHhhhhHHHHHHHHHHHHHhccCCEEEEEecc
Confidence            999999987421                             123345566667899888654

>PLN02780 ketoreductase/ oxidoreductase

Probab=96.08  E-value=0.027  Score=52.08  Aligned_cols=76  Identities=14%  Similarity=0.262  Sum_probs=52.2

Q ss_pred             CCCCEEEEEcC-ChHHHHHHHHHHHcCCeEEEEeCCchhHHHHHHHc----C-CC---EEecCCC--HHHHHH---hcC-
Q 018067          182 KPGMHVGVVGL-GGLGHVAVKFAKAMGVKVTVISTSPSKKSEAIERL----G-AD---SFLVSRD--QDEMQA---AMG-  246 (361)
Q Consensus       182 ~~g~~vlV~Ga-g~vG~~a~~la~~~g~~vi~~~~~~~~~~~~~~~~----g-~~---~vv~~~~--~~~~~~---~~~-  246 (361)
                      +.|++++|.|+ +++|...+..+...|++|+++++++++.+++.+++    + ..   ..+|..+  .+...+   ..+ 
T Consensus        51 ~~g~~~lITGAs~GIG~alA~~La~~G~~Vil~~R~~~~l~~~~~~l~~~~~~~~~~~~~~Dl~~~~~~~~~~l~~~~~~  130 (320)
T PLN02780         51 KYGSWALVTGPTDGIGKGFAFQLARKGLNLVLVARNPDKLKDVSDSIQSKYSKTQIKTVVVDFSGDIDEGVKRIKETIEG  130 (320)
T ss_pred             ccCCEEEEeCCCcHHHHHHHHHHHHCCCCEEEEECCHHHHHHHHHHHHHHCCCcEEEEEEEECCCCcHHHHHHHHHHhcC
Confidence            35899999998 99999999988889999999999988776665443    2 11   1223332  232222   223 


Q ss_pred             -CccEEEEcCCC
Q 018067          247 -TMDGIIDTVSA  257 (361)
Q Consensus       247 -g~d~vid~~g~  257 (361)
                       .+|++|+++|.
T Consensus       131 ~didilVnnAG~  142 (320)
T PLN02780        131 LDVGVLINNVGV  142 (320)
T ss_pred             CCccEEEEecCc
Confidence             35699999874

>PTZ00079 NADP-specific glutamate dehydrogenase; Provisional

Probab=96.08  E-value=0.16  Score=48.62  Aligned_cols=117  Identities=16%  Similarity=0.194  Sum_probs=70.9

Q ss_pred             HhhhcCCCCCCCEEEEEcCChHHHHHHHHHHHcCCeEEEEeCCc-----------hhHHHHH----------HHc-----
Q 018067          174 PLRFYGLDKPGMHVGVVGLGGLGHVAVKFAKAMGVKVTVISTSP-----------SKKSEAI----------ERL-----  227 (361)
Q Consensus       174 ~l~~~~~~~~g~~vlV~Gag~vG~~a~~la~~~g~~vi~~~~~~-----------~~~~~~~----------~~~-----  227 (361)
                      +++....--.|.+|+|.|.|.+|+.+++.+...|++|+.+.++.           +++..+.          +.+     
T Consensus       227 ~l~~~~~~l~Gk~VaVqG~GnVg~~aa~~L~e~GakVVavSD~~G~iy~~~Gld~~~l~~l~~~k~~~~g~i~~~~~~~~  306 (454)
T PTZ00079        227 VLKKLNDSLEGKTVVVSGSGNVAQYAVEKLLQLGAKVLTMSDSDGYIHEPNGFTKEKLAYLMDLKNVKRGRLKEYAKHSS  306 (454)
T ss_pred             HHHHcCCCcCCCEEEEECCCHHHHHHHHHHHHCCCEEEEEEcCCCcEECCCCCCHHHHHHHHHHHhhcCCcHHhhhhccC
Confidence            34444433478999999999999999999999999999666654           2221111          111     


Q ss_pred             CCCEEecCCC-------------------HHHHHHh-cCCccEEEEcCCCcccHHHHHhccccCCEEEEecCC--CCCcc
Q 018067          228 GADSFLVSRD-------------------QDEMQAA-MGTMDGIIDTVSAVHPLMPLIGLLKSQGKLVLVGAP--EKPLE  285 (361)
Q Consensus       228 g~~~vv~~~~-------------------~~~~~~~-~~g~d~vid~~g~~~~~~~~~~~l~~~G~~v~~g~~--~~~~~  285 (361)
                      +++. +...+                   .+.+..+ ..++.+|++.+..+.+ ..+.+.|...|.++.-+..  .+.+.
T Consensus       307 ~a~~-~~~~~~~~~~cDI~iPcA~~n~I~~~~a~~l~~~~ak~V~EgAN~p~t-~eA~~~L~~~GI~~~PD~~aNAGGV~  384 (454)
T PTZ00079        307 TAKY-VPGKKPWEVPCDIAFPCATQNEINLEDAKLLIKNGCKLVAEGANMPTT-IEATHLFKKNGVIFCPGKAANAGGVA  384 (454)
T ss_pred             CcEE-eCCcCcccCCccEEEeccccccCCHHHHHHHHHcCCeEEEecCCCCCC-HHHHHHHHHCCcEEEChhhhcCCCee
Confidence            2211 11111                   1233333 3477888888887774 4677777777766665442  23455


Q ss_pred             cChHHHH
Q 018067          286 LPAFSLL  292 (361)
Q Consensus       286 ~~~~~~~  292 (361)
                      .+.+++.
T Consensus       385 vS~~E~~  391 (454)
T PTZ00079        385 ISGLEMS  391 (454)
T ss_pred             eehHHhh
Confidence            5555544

>PRK15469 ghrA bifunctional glyoxylate/hydroxypyruvate reductase A; Provisional

Probab=96.07  E-value=0.031  Score=51.28  Aligned_cols=89  Identities=19%  Similarity=0.309  Sum_probs=63.8

Q ss_pred             CCCCEEEEEcCChHHHHHHHHHHHcCCeEEEEeCCchhHHHHHHHcCCCEEecCCCHHHHHHhcCCccEEEEcCCCcccH
Q 018067          182 KPGMHVGVVGLGGLGHVAVKFAKAMGVKVTVISTSPSKKSEAIERLGADSFLVSRDQDEMQAAMGTMDGIIDTVSAVHPL  261 (361)
Q Consensus       182 ~~g~~vlV~Gag~vG~~a~~la~~~g~~vi~~~~~~~~~~~~~~~~g~~~vv~~~~~~~~~~~~~g~d~vid~~g~~~~~  261 (361)
                      -.|++|.|+|.|.+|...++.++.+|++|++.++..++..      +.....   ..+.+.++....|+|+.+.......
T Consensus       134 l~g~tvgIvG~G~IG~~vA~~l~afG~~V~~~~~~~~~~~------~~~~~~---~~~~l~e~l~~aDvvv~~lPlt~~T  204 (312)
T PRK15469        134 REDFTIGILGAGVLGSKVAQSLQTWGFPLRCWSRSRKSWP------GVQSFA---GREELSAFLSQTRVLINLLPNTPET  204 (312)
T ss_pred             cCCCEEEEECCCHHHHHHHHHHHHCCCEEEEEeCCCCCCC------Cceeec---ccccHHHHHhcCCEEEECCCCCHHH
Confidence            3678999999999999999999999999999887543211      222211   1233455666789999888753311


Q ss_pred             -----HHHHhccccCCEEEEecC
Q 018067          262 -----MPLIGLLKSQGKLVLVGA  279 (361)
Q Consensus       262 -----~~~~~~l~~~G~~v~~g~  279 (361)
                           ...++.++++..+|.+|.
T Consensus       205 ~~li~~~~l~~mk~ga~lIN~aR  227 (312)
T PRK15469        205 VGIINQQLLEQLPDGAYLLNLAR  227 (312)
T ss_pred             HHHhHHHHHhcCCCCcEEEECCC
Confidence                 246778899999999875

>PRK06701 short chain dehydrogenase; Provisional

Probab=96.07  E-value=0.099  Score=47.48  Aligned_cols=76  Identities=16%  Similarity=0.241  Sum_probs=50.4

Q ss_pred             CCCCEEEEEcC-ChHHHHHHHHHHHcCCeEEEEeCCchh-HHHHH---HHcCCCE---EecCCCHHHHHHh-------cC
Q 018067          182 KPGMHVGVVGL-GGLGHVAVKFAKAMGVKVTVISTSPSK-KSEAI---ERLGADS---FLVSRDQDEMQAA-------MG  246 (361)
Q Consensus       182 ~~g~~vlV~Ga-g~vG~~a~~la~~~g~~vi~~~~~~~~-~~~~~---~~~g~~~---vv~~~~~~~~~~~-------~~  246 (361)
                      -++.++||.|+ |.+|..++..+...|++|+++.+.+++ ...+.   +..+.+.   ..|..+.+.+..+       .+
T Consensus        44 ~~~k~iLItGasggIG~~la~~l~~~G~~V~l~~r~~~~~~~~~~~~~~~~~~~~~~~~~Dl~~~~~~~~~~~~i~~~~~  123 (290)
T PRK06701         44 LKGKVALITGGDSGIGRAVAVLFAKEGADIAIVYLDEHEDANETKQRVEKEGVKCLLIPGDVSDEAFCKDAVEETVRELG  123 (290)
T ss_pred             CCCCEEEEeCCCcHHHHHHHHHHHHCCCEEEEEeCCcchHHHHHHHHHHhcCCeEEEEEccCCCHHHHHHHHHHHHHHcC
Confidence            45788999997 999999999998899999998877532 22222   2223322   2244444433322       24


Q ss_pred             CccEEEEcCCC
Q 018067          247 TMDGIIDTVSA  257 (361)
Q Consensus       247 g~d~vid~~g~  257 (361)
                      ++|++|.++|.
T Consensus       124 ~iD~lI~~Ag~  134 (290)
T PRK06701        124 RLDILVNNAAF  134 (290)
T ss_pred             CCCEEEECCcc
Confidence            78999999875

>TIGR03840 TMPT_Se_Te thiopurine S-methyltransferase, Se/Te detoxification family

Probab=96.06  E-value=0.041  Score=47.60  Aligned_cols=96  Identities=19%  Similarity=0.149  Sum_probs=62.4

Q ss_pred             CCCCEEEEEcCChHHHHHHHHHHHcCCeEEEEeCCchhHHHHHHHcCCCEEe--------------cCCCHHHH---HHh
Q 018067          182 KPGMHVGVVGLGGLGHVAVKFAKAMGVKVTVISTSPSKKSEAIERLGADSFL--------------VSRDQDEM---QAA  244 (361)
Q Consensus       182 ~~g~~vlV~Gag~vG~~a~~la~~~g~~vi~~~~~~~~~~~~~~~~g~~~vv--------------~~~~~~~~---~~~  244 (361)
                      .++.+||+.|+|. |.-++.+|. .|.+|+.++-++...+.+.++.+.....              .....|..   ...
T Consensus        33 ~~~~rvLd~GCG~-G~da~~LA~-~G~~V~gvD~S~~Ai~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~D~~~~~~~~  110 (213)
T TIGR03840        33 PAGARVFVPLCGK-SLDLAWLAE-QGHRVLGVELSEIAVEQFFAENGLTPTVTQQGEFTRYRAGNIEIFCGDFFALTAAD  110 (213)
T ss_pred             CCCCeEEEeCCCc-hhHHHHHHh-CCCeEEEEeCCHHHHHHHHHHcCCCcceeccccceeeecCceEEEEccCCCCCccc
Confidence            5778999999875 777777775 6999999999998777655544432100              00000100   011


Q ss_pred             cCCccEEEEcCCC--------cccHHHHHhccccCCEEEEecC
Q 018067          245 MGTMDGIIDTVSA--------VHPLMPLIGLLKSQGKLVLVGA  279 (361)
Q Consensus       245 ~~g~d~vid~~g~--------~~~~~~~~~~l~~~G~~v~~g~  279 (361)
                      .+.+|.++|...-        ...+....++|+|+|+++.++.
T Consensus       111 ~~~fD~i~D~~~~~~l~~~~R~~~~~~l~~lLkpgG~~ll~~~  153 (213)
T TIGR03840       111 LGPVDAVYDRAALIALPEEMRQRYAAHLLALLPPGARQLLITL  153 (213)
T ss_pred             CCCcCEEEechhhccCCHHHHHHHHHHHHHHcCCCCeEEEEEE
Confidence            2358999997542        2236678899999999777654

Members of this family are thiopurine S-methyltransferase from a branch in which at least some member proteins can perform selenium methylation as a means to detoxify selenium, or perform a related detoxification of tellurium. Note that the EC number definition does not specify a particular thiopurine, but rather represents a class of activity.

>PRK07035 short chain dehydrogenase; Provisional

Probab=96.06  E-value=0.037  Score=48.94  Aligned_cols=75  Identities=20%  Similarity=0.302  Sum_probs=52.5

Q ss_pred             CCCEEEEEcC-ChHHHHHHHHHHHcCCeEEEEeCCchhHHHHHHHc---CCC-E--EecCCCHHHHHHh-------cCCc
Q 018067          183 PGMHVGVVGL-GGLGHVAVKFAKAMGVKVTVISTSPSKKSEAIERL---GAD-S--FLVSRDQDEMQAA-------MGTM  248 (361)
Q Consensus       183 ~g~~vlV~Ga-g~vG~~a~~la~~~g~~vi~~~~~~~~~~~~~~~~---g~~-~--vv~~~~~~~~~~~-------~~g~  248 (361)
                      .+.+++|.|+ |.+|...++.+...|++|++++++.++...+.+++   +.. .  ..|..+.+.+..+       .+.+
T Consensus         7 ~~k~vlItGas~gIG~~l~~~l~~~G~~Vi~~~r~~~~~~~~~~~~~~~~~~~~~~~~D~~~~~~~~~~~~~~~~~~~~i   86 (252)
T PRK07035          7 TGKIALVTGASRGIGEAIAKLLAQQGAHVIVSSRKLDGCQAVADAIVAAGGKAEALACHIGEMEQIDALFAHIRERHGRL   86 (252)
T ss_pred             CCCEEEEECCCcHHHHHHHHHHHHCCCEEEEEeCCHHHHHHHHHHHHhcCCeEEEEEcCCCCHHHHHHHHHHHHHHcCCC
Confidence            4578999997 99999999999999999999998876655554433   321 1  1244444433222       2469


Q ss_pred             cEEEEcCCC
Q 018067          249 DGIIDTVSA  257 (361)
Q Consensus       249 d~vid~~g~  257 (361)
                      |++++++|.
T Consensus        87 d~li~~ag~   95 (252)
T PRK07035         87 DILVNNAAA   95 (252)
T ss_pred             CEEEECCCc
Confidence            999999874

>PRK06482 short chain dehydrogenase; Provisional

Probab=96.05  E-value=0.055  Score=48.57  Aligned_cols=73  Identities=19%  Similarity=0.254  Sum_probs=52.4

Q ss_pred             CEEEEEcC-ChHHHHHHHHHHHcCCeEEEEeCCchhHHHHHHHcCCCE---EecCCCHHHHHHh-------cCCccEEEE
Q 018067          185 MHVGVVGL-GGLGHVAVKFAKAMGVKVTVISTSPSKKSEAIERLGADS---FLVSRDQDEMQAA-------MGTMDGIID  253 (361)
Q Consensus       185 ~~vlV~Ga-g~vG~~a~~la~~~g~~vi~~~~~~~~~~~~~~~~g~~~---vv~~~~~~~~~~~-------~~g~d~vid  253 (361)
                      .++||.|+ |.+|...++.+...|.+|++++++.++...+.+..+...   ..|..+.+.+..+       .+++|++|.
T Consensus         3 k~vlVtGasg~IG~~la~~L~~~g~~v~~~~r~~~~~~~~~~~~~~~~~~~~~D~~~~~~~~~~~~~~~~~~~~id~vi~   82 (276)
T PRK06482          3 KTWFITGASSGFGRGMTERLLARGDRVAATVRRPDALDDLKARYGDRLWVLQLDVTDSAAVRAVVDRAFAALGRIDVVVS   82 (276)
T ss_pred             CEEEEecCCCHHHHHHHHHHHHCCCEEEEEeCCHHHHHHHHHhccCceEEEEccCCCHHHHHHHHHHHHHHcCCCCEEEE
Confidence            57999997 999999999998899999999998877666644444321   2344554433322       246899999


Q ss_pred             cCCC
Q 018067          254 TVSA  257 (361)
Q Consensus       254 ~~g~  257 (361)
                      ++|.
T Consensus        83 ~ag~   86 (276)
T PRK06482         83 NAGY   86 (276)
T ss_pred             CCCC
Confidence            9875

>PRK08159 enoyl-(acyl carrier protein) reductase; Provisional

Probab=96.04  E-value=0.044  Score=49.28  Aligned_cols=76  Identities=16%  Similarity=0.232  Sum_probs=51.5

Q ss_pred             CCCCEEEEEcC---ChHHHHHHHHHHHcCCeEEEEeCCc---hhHHHHHHHcCCC--EEecCCCHHHHHHh-------cC
Q 018067          182 KPGMHVGVVGL---GGLGHVAVKFAKAMGVKVTVISTSP---SKKSEAIERLGAD--SFLVSRDQDEMQAA-------MG  246 (361)
Q Consensus       182 ~~g~~vlV~Ga---g~vG~~a~~la~~~g~~vi~~~~~~---~~~~~~~~~~g~~--~vv~~~~~~~~~~~-------~~  246 (361)
                      -.++++||.|+   +++|.++++.+...|++|+++.+++   ++..++.++++..  ...|-.+++.++++       .+
T Consensus         8 ~~~k~~lItGas~~~GIG~aia~~la~~G~~V~l~~r~~~~~~~~~~l~~~~~~~~~~~~Dl~~~~~v~~~~~~~~~~~g   87 (272)
T PRK08159          8 MAGKRGLILGVANNRSIAWGIAKACRAAGAELAFTYQGDALKKRVEPLAAELGAFVAGHCDVTDEASIDAVFETLEKKWG   87 (272)
T ss_pred             ccCCEEEEECCCCCCcHHHHHHHHHHHCCCEEEEEcCchHHHHHHHHHHHhcCCceEEecCCCCHHHHHHHHHHHHHhcC
Confidence            35788999986   5899999999999999998887653   3334454555532  22344554433322       24


Q ss_pred             CccEEEEcCCC
Q 018067          247 TMDGIIDTVSA  257 (361)
Q Consensus       247 g~d~vid~~g~  257 (361)
                      .+|++|+++|.
T Consensus        88 ~iD~lv~nAG~   98 (272)
T PRK08159         88 KLDFVVHAIGF   98 (272)
T ss_pred             CCcEEEECCcc
Confidence            69999999874

>PRK07097 gluconate 5-dehydrogenase; Provisional

Probab=96.03  E-value=0.06  Score=48.05  Aligned_cols=75  Identities=17%  Similarity=0.270  Sum_probs=53.4

Q ss_pred             CCCEEEEEcC-ChHHHHHHHHHHHcCCeEEEEeCCchhHHHHHHHc---CCC---EEecCCCHHHHHHh-------cCCc
Q 018067          183 PGMHVGVVGL-GGLGHVAVKFAKAMGVKVTVISTSPSKKSEAIERL---GAD---SFLVSRDQDEMQAA-------MGTM  248 (361)
Q Consensus       183 ~g~~vlV~Ga-g~vG~~a~~la~~~g~~vi~~~~~~~~~~~~~~~~---g~~---~vv~~~~~~~~~~~-------~~g~  248 (361)
                      .+.+++|.|+ +.+|..++..+...|++|++++++.++...+.+.+   +..   ...|..+.+.+..+       .+++
T Consensus         9 ~~k~~lItGa~~~iG~~ia~~l~~~G~~vv~~~~~~~~~~~~~~~~~~~~~~~~~~~~Dl~~~~~~~~~~~~~~~~~~~i   88 (265)
T PRK07097          9 KGKIALITGASYGIGFAIAKAYAKAGATIVFNDINQELVDKGLAAYRELGIEAHGYVCDVTDEDGVQAMVSQIEKEVGVI   88 (265)
T ss_pred             CCCEEEEeCCCchHHHHHHHHHHHCCCeEEEEeCCHHHHHHHHHHHHhcCCceEEEEcCCCCHHHHHHHHHHHHHhCCCC
Confidence            5788999997 99999999988889999999988877655544333   432   12345554433332       2469


Q ss_pred             cEEEEcCCC
Q 018067          249 DGIIDTVSA  257 (361)
Q Consensus       249 d~vid~~g~  257 (361)
                      |++|.++|.
T Consensus        89 d~li~~ag~   97 (265)
T PRK07097         89 DILVNNAGI   97 (265)
T ss_pred             CEEEECCCC
Confidence            999999985

>PRK06172 short chain dehydrogenase; Provisional

Probab=96.03  E-value=0.028  Score=49.77  Aligned_cols=75  Identities=20%  Similarity=0.265  Sum_probs=52.3

Q ss_pred             CCCEEEEEcC-ChHHHHHHHHHHHcCCeEEEEeCCchhHHHHHH---HcCCCE---EecCCCHHHHHHh-------cCCc
Q 018067          183 PGMHVGVVGL-GGLGHVAVKFAKAMGVKVTVISTSPSKKSEAIE---RLGADS---FLVSRDQDEMQAA-------MGTM  248 (361)
Q Consensus       183 ~g~~vlV~Ga-g~vG~~a~~la~~~g~~vi~~~~~~~~~~~~~~---~~g~~~---vv~~~~~~~~~~~-------~~g~  248 (361)
                      .+++++|.|+ |.+|..++..+...|++|++++++.++...+.+   +.+.+.   ..|..+.+.+..+       .+++
T Consensus         6 ~~k~ilItGas~~iG~~ia~~l~~~G~~v~~~~r~~~~~~~~~~~~~~~~~~~~~~~~D~~~~~~i~~~~~~~~~~~g~i   85 (253)
T PRK06172          6 SGKVALVTGGAAGIGRATALAFAREGAKVVVADRDAAGGEETVALIREAGGEALFVACDVTRDAEVKALVEQTIAAYGRL   85 (253)
T ss_pred             CCCEEEEeCCCchHHHHHHHHHHHcCCEEEEEeCCHHHHHHHHHHHHhcCCceEEEEcCCCCHHHHHHHHHHHHHHhCCC
Confidence            4688999998 999999999998899999999998766444433   233321   2344444433322       2468


Q ss_pred             cEEEEcCCC
Q 018067          249 DGIIDTVSA  257 (361)
Q Consensus       249 d~vid~~g~  257 (361)
                      |++|.++|.
T Consensus        86 d~li~~ag~   94 (253)
T PRK06172         86 DYAFNNAGI   94 (253)
T ss_pred             CEEEECCCC
Confidence            999999884

>COG2264 PrmA Ribosomal protein L11 methylase [Translation, ribosomal structure and biogenesis]

Probab=96.03  E-value=0.084  Score=47.68  Aligned_cols=128  Identities=24%  Similarity=0.301  Sum_probs=76.4

Q ss_pred             CCceEECCCCCCcccccccchhhhhh--hhHhhhcCCCCCCCEEEEEcCChHHHHHHHHHHHcCC-eEEEEeCCchhHHH
Q 018067          146 EHFVVRIPEGTPLDATAPLLCAGITV--YSPLRFYGLDKPGMHVGVVGLGGLGHVAVKFAKAMGV-KVTVISTSPSKKSE  222 (361)
Q Consensus       146 ~~~~~~ip~~~~~~~aa~l~~~~~ta--~~~l~~~~~~~~g~~vlV~Gag~vG~~a~~la~~~g~-~vi~~~~~~~~~~~  222 (361)
                      ...++++.+++.|...-    ...|+  ..++.+.  +++|.+||=+|+|. |.+++..++. |+ +|+.++..+...+.
T Consensus       129 ~~~~i~lDPGlAFGTG~----HpTT~lcL~~Le~~--~~~g~~vlDvGcGS-GILaIAa~kL-GA~~v~g~DiDp~AV~a  200 (300)
T COG2264         129 DELNIELDPGLAFGTGT----HPTTSLCLEALEKL--LKKGKTVLDVGCGS-GILAIAAAKL-GAKKVVGVDIDPQAVEA  200 (300)
T ss_pred             CceEEEEccccccCCCC----ChhHHHHHHHHHHh--hcCCCEEEEecCCh-hHHHHHHHHc-CCceEEEecCCHHHHHH
Confidence            46678888888775432    22222  3445554  46999999999865 7777776665 55 79988887754433


Q ss_pred             HH---HHcCCCEEecCCCHHHHHHhc-CCccEEEEcCCCc---ccHHHHHhccccCCEEEEecCCC
Q 018067          223 AI---ERLGADSFLVSRDQDEMQAAM-GTMDGIIDTVSAV---HPLMPLIGLLKSQGKLVLVGAPE  281 (361)
Q Consensus       223 ~~---~~~g~~~vv~~~~~~~~~~~~-~g~d~vid~~g~~---~~~~~~~~~l~~~G~~v~~g~~~  281 (361)
                      ..   +.-+....+............ +.+|+|+-++=..   .......+.++++|++++-|...
T Consensus       201 a~eNa~~N~v~~~~~~~~~~~~~~~~~~~~DvIVANILA~vl~~La~~~~~~lkpgg~lIlSGIl~  266 (300)
T COG2264         201 ARENARLNGVELLVQAKGFLLLEVPENGPFDVIVANILAEVLVELAPDIKRLLKPGGRLILSGILE  266 (300)
T ss_pred             HHHHHHHcCCchhhhcccccchhhcccCcccEEEehhhHHHHHHHHHHHHHHcCCCceEEEEeehH
Confidence            31   122232111111111222233 3799998765332   12456778899999999998654

>PRK14190 bifunctional 5,10-methylene-tetrahydrofolate dehydrogenase/ 5,10-methylene-tetrahydrofolate cyclohydrolase; Provisional

Probab=96.02  E-value=0.068  Score=48.03  Aligned_cols=97  Identities=21%  Similarity=0.228  Sum_probs=74.5

Q ss_pred             cccchhhhhhhhHhhhcCCCCCCCEEEEEcC-ChHHHHHHHHHHHcCCeEEEEeCCchhHHHHHHHcCCCEEecCCCHHH
Q 018067          162 APLLCAGITVYSPLRFYGLDKPGMHVGVVGL-GGLGHVAVKFAKAMGVKVTVISTSPSKKSEAIERLGADSFLVSRDQDE  240 (361)
Q Consensus       162 a~l~~~~~ta~~~l~~~~~~~~g~~vlV~Ga-g~vG~~a~~la~~~g~~vi~~~~~~~~~~~~~~~~g~~~vv~~~~~~~  240 (361)
                      ...||+..+....++...---.|++|+|+|. ..+|.-.+.++...|++|++..+...                     .
T Consensus       136 ~~~PcTp~av~~lL~~~~i~l~Gk~vvViGrS~iVG~Pla~lL~~~~atVt~chs~t~---------------------~  194 (284)
T PRK14190        136 TFLPCTPHGILELLKEYNIDISGKHVVVVGRSNIVGKPVGQLLLNENATVTYCHSKTK---------------------N  194 (284)
T ss_pred             CCCCCCHHHHHHHHHHcCCCCCCCEEEEECCCCccHHHHHHHHHHCCCEEEEEeCCch---------------------h
Confidence            3567777777777877764468999999996 88999999999999999987654322                     1


Q ss_pred             HHHhcCCccEEEEcCCCcccHHHHHhccccCCEEEEecCCC
Q 018067          241 MQAAMGTMDGIIDTVSAVHPLMPLIGLLKSQGKLVLVGAPE  281 (361)
Q Consensus       241 ~~~~~~g~d~vid~~g~~~~~~~~~~~l~~~G~~v~~g~~~  281 (361)
                      +.+....+|++|-++|.+..  ---+.+++|..++++|...
T Consensus       195 l~~~~~~ADIvI~AvG~p~~--i~~~~ik~gavVIDvGi~~  233 (284)
T PRK14190        195 LAELTKQADILIVAVGKPKL--ITADMVKEGAVVIDVGVNR  233 (284)
T ss_pred             HHHHHHhCCEEEEecCCCCc--CCHHHcCCCCEEEEeeccc
Confidence            23344568999999999873  3356779999999999753

>COG2910 Putative NADH-flavin reductase [General function prediction only]

Probab=96.02  E-value=0.05  Score=45.08  Aligned_cols=91  Identities=26%  Similarity=0.404  Sum_probs=62.1

Q ss_pred             EEEEEcC-ChHHHHHHHHHHHcCCeEEEEeCCchhHHHHHHHcCCCEEecCC--CHHHHHHhcCCccEEEEcCCCcc---
Q 018067          186 HVGVVGL-GGLGHVAVKFAKAMGVKVTVISTSPSKKSEAIERLGADSFLVSR--DQDEMQAAMGTMDGIIDTVSAVH---  259 (361)
Q Consensus       186 ~vlV~Ga-g~vG~~a~~la~~~g~~vi~~~~~~~~~~~~~~~~g~~~vv~~~--~~~~~~~~~~g~d~vid~~g~~~---  259 (361)
                      +|.|+|+ |.+|...++=|+.+|-.|+.+++++.+.... +  +. .++..+  +.+.+...-.|+|+||++.|...   
T Consensus         2 KIaiIgAsG~~Gs~i~~EA~~RGHeVTAivRn~~K~~~~-~--~~-~i~q~Difd~~~~a~~l~g~DaVIsA~~~~~~~~   77 (211)
T COG2910           2 KIAIIGASGKAGSRILKEALKRGHEVTAIVRNASKLAAR-Q--GV-TILQKDIFDLTSLASDLAGHDAVISAFGAGASDN   77 (211)
T ss_pred             eEEEEecCchhHHHHHHHHHhCCCeeEEEEeChHhcccc-c--cc-eeecccccChhhhHhhhcCCceEEEeccCCCCCh
Confidence            5889998 9999999999999999999999998775432 1  11 111111  22333355569999999988651   


Q ss_pred             ------cHHHHHhccccC--CEEEEecCC
Q 018067          260 ------PLMPLIGLLKSQ--GKLVLVGAP  280 (361)
Q Consensus       260 ------~~~~~~~~l~~~--G~~v~~g~~  280 (361)
                            ..+..+..++.-  -|++.+|.-
T Consensus        78 ~~~~~k~~~~li~~l~~agv~RllVVGGA  106 (211)
T COG2910          78 DELHSKSIEALIEALKGAGVPRLLVVGGA  106 (211)
T ss_pred             hHHHHHHHHHHHHHHhhcCCeeEEEEcCc
Confidence                  123356666553  488888863

>PRK07074 short chain dehydrogenase; Provisional

Probab=96.01  E-value=0.042  Score=48.71  Aligned_cols=74  Identities=22%  Similarity=0.274  Sum_probs=53.4

Q ss_pred             CCEEEEEcC-ChHHHHHHHHHHHcCCeEEEEeCCchhHHHHHHHcC---CC-EEecCCCHHHHHHhc-------CCccEE
Q 018067          184 GMHVGVVGL-GGLGHVAVKFAKAMGVKVTVISTSPSKKSEAIERLG---AD-SFLVSRDQDEMQAAM-------GTMDGI  251 (361)
Q Consensus       184 g~~vlV~Ga-g~vG~~a~~la~~~g~~vi~~~~~~~~~~~~~~~~g---~~-~vv~~~~~~~~~~~~-------~g~d~v  251 (361)
                      ++++||.|+ |.+|...+..+...|++|++++++.++...+.+.+.   +. ...|..+.+.+..+.       +++|++
T Consensus         2 ~k~ilItGat~~iG~~la~~L~~~g~~v~~~~r~~~~~~~~~~~~~~~~~~~~~~D~~~~~~~~~~~~~~~~~~~~~d~v   81 (257)
T PRK07074          2 KRTALVTGAAGGIGQALARRFLAAGDRVLALDIDAAALAAFADALGDARFVPVACDLTDAASLAAALANAAAERGPVDVL   81 (257)
T ss_pred             CCEEEEECCcchHHHHHHHHHHHCCCEEEEEeCCHHHHHHHHHHhcCCceEEEEecCCCHHHHHHHHHHHHHHcCCCCEE
Confidence            468999998 999999999988899999999998877666655442   11 123455554443221       369999


Q ss_pred             EEcCCC
Q 018067          252 IDTVSA  257 (361)
Q Consensus       252 id~~g~  257 (361)
                      |.++|.
T Consensus        82 i~~ag~   87 (257)
T PRK07074         82 VANAGA   87 (257)
T ss_pred             EECCCC
Confidence            999985

>PRK12826 3-ketoacyl-(acyl-carrier-protein) reductase; Reviewed

Probab=96.00  E-value=0.038  Score=48.64  Aligned_cols=75  Identities=23%  Similarity=0.337  Sum_probs=51.6

Q ss_pred             CCCEEEEEcC-ChHHHHHHHHHHHcCCeEEEEeCCchhHHHHHHHc---CCCE---EecCCCHHHHHHhc-------CCc
Q 018067          183 PGMHVGVVGL-GGLGHVAVKFAKAMGVKVTVISTSPSKKSEAIERL---GADS---FLVSRDQDEMQAAM-------GTM  248 (361)
Q Consensus       183 ~g~~vlV~Ga-g~vG~~a~~la~~~g~~vi~~~~~~~~~~~~~~~~---g~~~---vv~~~~~~~~~~~~-------~g~  248 (361)
                      .+.++||.|+ |.+|...+..+...|++|++++++.++...+.+.+   +.+.   ..|..+.+.+..+.       +.+
T Consensus         5 ~~~~ilItGasg~iG~~l~~~l~~~g~~V~~~~r~~~~~~~~~~~l~~~~~~~~~~~~Dl~~~~~~~~~~~~~~~~~~~~   84 (251)
T PRK12826          5 EGRVALVTGAARGIGRAIAVRLAADGAEVIVVDICGDDAAATAELVEAAGGKARARQVDVRDRAALKAAVAAGVEDFGRL   84 (251)
T ss_pred             CCCEEEEcCCCCcHHHHHHHHHHHCCCEEEEEeCCHHHHHHHHHHHHhcCCeEEEEECCCCCHHHHHHHHHHHHHHhCCC
Confidence            4678999997 99999999999889999999999865544433322   2221   12444544333322       368


Q ss_pred             cEEEEcCCC
Q 018067          249 DGIIDTVSA  257 (361)
Q Consensus       249 d~vid~~g~  257 (361)
                      |++|.++|.
T Consensus        85 d~vi~~ag~   93 (251)
T PRK12826         85 DILVANAGI   93 (251)
T ss_pred             CEEEECCCC
Confidence            999999865

>PRK06935 2-deoxy-D-gluconate 3-dehydrogenase; Provisional

Probab=96.00  E-value=0.038  Score=49.13  Aligned_cols=74  Identities=18%  Similarity=0.262  Sum_probs=50.9

Q ss_pred             CCCEEEEEcC-ChHHHHHHHHHHHcCCeEEEEeCCchhHHHH---HHHcCCC---EEecCCCHHHHHHh-------cCCc
Q 018067          183 PGMHVGVVGL-GGLGHVAVKFAKAMGVKVTVISTSPSKKSEA---IERLGAD---SFLVSRDQDEMQAA-------MGTM  248 (361)
Q Consensus       183 ~g~~vlV~Ga-g~vG~~a~~la~~~g~~vi~~~~~~~~~~~~---~~~~g~~---~vv~~~~~~~~~~~-------~~g~  248 (361)
                      .++++||.|+ |.+|...++.+...|++|++++++ ++...+   ..+.+.+   ...|..+.+.+..+       .+++
T Consensus        14 ~~k~vlItGas~gIG~~ia~~l~~~G~~v~~~~~~-~~~~~~~~~~~~~~~~~~~~~~D~~~~~~i~~~~~~~~~~~g~i   92 (258)
T PRK06935         14 DGKVAIVTGGNTGLGQGYAVALAKAGADIIITTHG-TNWDETRRLIEKEGRKVTFVQVDLTKPESAEKVVKEALEEFGKI   92 (258)
T ss_pred             CCCEEEEeCCCchHHHHHHHHHHHCCCEEEEEeCC-cHHHHHHHHHHhcCCceEEEEcCCCCHHHHHHHHHHHHHHcCCC
Confidence            5789999998 999999999999999999999887 332333   2233432   12344554433322       2478


Q ss_pred             cEEEEcCCC
Q 018067          249 DGIIDTVSA  257 (361)
Q Consensus       249 d~vid~~g~  257 (361)
                      |++|.++|.
T Consensus        93 d~li~~ag~  101 (258)
T PRK06935         93 DILVNNAGT  101 (258)
T ss_pred             CEEEECCCC
Confidence            999999884

>PRK14180 bifunctional 5,10-methylene-tetrahydrofolate dehydrogenase/ 5,10-methylene-tetrahydrofolate cyclohydrolase; Provisional

Probab=96.00  E-value=0.063  Score=48.14  Aligned_cols=96  Identities=19%  Similarity=0.209  Sum_probs=74.6

Q ss_pred             cccchhhhhhhhHhhhcCCCCCCCEEEEEcC-ChHHHHHHHHHHHcCCeEEEEeCCchhHHHHHHHcCCCEEecCCCHHH
Q 018067          162 APLLCAGITVYSPLRFYGLDKPGMHVGVVGL-GGLGHVAVKFAKAMGVKVTVISTSPSKKSEAIERLGADSFLVSRDQDE  240 (361)
Q Consensus       162 a~l~~~~~ta~~~l~~~~~~~~g~~vlV~Ga-g~vG~~a~~la~~~g~~vi~~~~~~~~~~~~~~~~g~~~vv~~~~~~~  240 (361)
                      ..+||+..+.+..++...---.|++|+|+|. ..+|.=.+.++...|++|++..+.....                    
T Consensus       136 ~~~PcTp~aii~lL~~y~i~l~Gk~vvViGrS~~VGkPla~lL~~~~ATVt~chs~T~dl--------------------  195 (282)
T PRK14180        136 CLESCTPKGIMTMLREYGIKTEGAYAVVVGASNVVGKPVSQLLLNAKATVTTCHRFTTDL--------------------  195 (282)
T ss_pred             CcCCCCHHHHHHHHHHhCCCCCCCEEEEECCCCcchHHHHHHHHHCCCEEEEEcCCCCCH--------------------
Confidence            3567777777888887765468999999996 8899999999999999998776543222                    


Q ss_pred             HHHhcCCccEEEEcCCCcccHHHHHhccccCCEEEEecCC
Q 018067          241 MQAAMGTMDGIIDTVSAVHPLMPLIGLLKSQGKLVLVGAP  280 (361)
Q Consensus       241 ~~~~~~g~d~vid~~g~~~~~~~~~~~l~~~G~~v~~g~~  280 (361)
                       .+.+..+|+++-++|.+..+  -.+.+++|..++.+|..
T Consensus       196 -~~~~k~ADIvIsAvGkp~~i--~~~~vk~gavVIDvGin  232 (282)
T PRK14180        196 -KSHTTKADILIVAVGKPNFI--TADMVKEGAVVIDVGIN  232 (282)
T ss_pred             -HHHhhhcCEEEEccCCcCcC--CHHHcCCCcEEEEeccc
Confidence             22344689999999998833  34788999999999974

>PRK14169 bifunctional 5,10-methylene-tetrahydrofolate dehydrogenase/ 5,10-methylene-tetrahydrofolate cyclohydrolase; Provisional

Probab=95.98  E-value=0.068  Score=47.93  Aligned_cols=97  Identities=16%  Similarity=0.170  Sum_probs=74.4

Q ss_pred             cccchhhhhhhhHhhhcCCCCCCCEEEEEcC-ChHHHHHHHHHHHcCCeEEEEeCCchhHHHHHHHcCCCEEecCCCHHH
Q 018067          162 APLLCAGITVYSPLRFYGLDKPGMHVGVVGL-GGLGHVAVKFAKAMGVKVTVISTSPSKKSEAIERLGADSFLVSRDQDE  240 (361)
Q Consensus       162 a~l~~~~~ta~~~l~~~~~~~~g~~vlV~Ga-g~vG~~a~~la~~~g~~vi~~~~~~~~~~~~~~~~g~~~vv~~~~~~~  240 (361)
                      ..+||+..+.+..++...---.|++|+|+|. ..+|.=.+.++...|++|++..+.....                    
T Consensus       134 ~~~PcTp~avi~lL~~~~i~l~Gk~vvViGrS~iVGkPla~lL~~~~atVtichs~T~~l--------------------  193 (282)
T PRK14169        134 TVVASTPYGIMALLDAYDIDVAGKRVVIVGRSNIVGRPLAGLMVNHDATVTIAHSKTRNL--------------------  193 (282)
T ss_pred             CCCCCCHHHHHHHHHHhCCCCCCCEEEEECCCccchHHHHHHHHHCCCEEEEECCCCCCH--------------------
Confidence            3567777777777877764468999999996 7899999999999999998765443222                    


Q ss_pred             HHHhcCCccEEEEcCCCcccHHHHHhccccCCEEEEecCCC
Q 018067          241 MQAAMGTMDGIIDTVSAVHPLMPLIGLLKSQGKLVLVGAPE  281 (361)
Q Consensus       241 ~~~~~~g~d~vid~~g~~~~~~~~~~~l~~~G~~v~~g~~~  281 (361)
                       .+.+..+|+++-++|.+..  --.+.+++|..++.+|...
T Consensus       194 -~~~~~~ADIvI~AvG~p~~--i~~~~vk~GavVIDvGin~  231 (282)
T PRK14169        194 -KQLTKEADILVVAVGVPHF--IGADAVKPGAVVIDVGISR  231 (282)
T ss_pred             -HHHHhhCCEEEEccCCcCc--cCHHHcCCCcEEEEeeccc
Confidence             2334458999999999883  3456889999999999743

>PRK06124 gluconate 5-dehydrogenase; Provisional

Probab=95.96  E-value=0.044  Score=48.55  Aligned_cols=75  Identities=24%  Similarity=0.318  Sum_probs=53.0

Q ss_pred             CCCEEEEEcC-ChHHHHHHHHHHHcCCeEEEEeCCchhHHHHHHH---cCCC---EEecCCCHHHHHHh-------cCCc
Q 018067          183 PGMHVGVVGL-GGLGHVAVKFAKAMGVKVTVISTSPSKKSEAIER---LGAD---SFLVSRDQDEMQAA-------MGTM  248 (361)
Q Consensus       183 ~g~~vlV~Ga-g~vG~~a~~la~~~g~~vi~~~~~~~~~~~~~~~---~g~~---~vv~~~~~~~~~~~-------~~g~  248 (361)
                      ++++++|.|+ |.+|..++..+...|++|++++++.+....+.++   .+..   ...|..+++.+..+       .+++
T Consensus        10 ~~k~ilItGas~~IG~~la~~l~~~G~~v~~~~r~~~~~~~~~~~~~~~~~~~~~~~~Dl~~~~~~~~~~~~~~~~~~~i   89 (256)
T PRK06124         10 AGQVALVTGSARGLGFEIARALAGAGAHVLVNGRNAATLEAAVAALRAAGGAAEALAFDIADEEAVAAAFARIDAEHGRL   89 (256)
T ss_pred             CCCEEEEECCCchHHHHHHHHHHHcCCeEEEEeCCHHHHHHHHHHHHhcCCceEEEEccCCCHHHHHHHHHHHHHhcCCC
Confidence            6889999997 9999999998888999999999987665554332   3422   12244554433322       2468


Q ss_pred             cEEEEcCCC
Q 018067          249 DGIIDTVSA  257 (361)
Q Consensus       249 d~vid~~g~  257 (361)
                      |++|.++|.
T Consensus        90 d~vi~~ag~   98 (256)
T PRK06124         90 DILVNNVGA   98 (256)
T ss_pred             CEEEECCCC
Confidence            999999885

>PLN02989 cinnamyl-alcohol dehydrogenase family protein

Probab=95.96  E-value=0.036  Score=51.14  Aligned_cols=76  Identities=21%  Similarity=0.267  Sum_probs=52.6

Q ss_pred             CCCCEEEEEcC-ChHHHHHHHHHHHcCCeEEEEeCCchhHHHHHHHc---CC--C-EE--ecCCCHHHHHHhcCCccEEE
Q 018067          182 KPGMHVGVVGL-GGLGHVAVKFAKAMGVKVTVISTSPSKKSEAIERL---GA--D-SF--LVSRDQDEMQAAMGTMDGII  252 (361)
Q Consensus       182 ~~g~~vlV~Ga-g~vG~~a~~la~~~g~~vi~~~~~~~~~~~~~~~~---g~--~-~v--v~~~~~~~~~~~~~g~d~vi  252 (361)
                      ..+++|||.|+ |.+|..++..+...|++|++++++.+........+   +.  . ..  .|..+.+.+.++..++|+||
T Consensus         3 ~~~k~vlVtG~~G~IG~~l~~~L~~~G~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~~D~~d~~~~~~~~~~~d~vi   82 (325)
T PLN02989          3 DGGKVVCVTGASGYIASWIVKLLLFRGYTINATVRDPKDRKKTDHLLALDGAKERLKLFKADLLDEGSFELAIDGCETVF   82 (325)
T ss_pred             CCCCEEEEECCchHHHHHHHHHHHHCCCEEEEEEcCCcchhhHHHHHhccCCCCceEEEeCCCCCchHHHHHHcCCCEEE
Confidence            35789999997 99999999999999999988877765432221111   11  1 11  24455565666666899999


Q ss_pred             EcCCC
Q 018067          253 DTVSA  257 (361)
Q Consensus       253 d~~g~  257 (361)
                      +++|.
T Consensus        83 h~A~~   87 (325)
T PLN02989         83 HTASP   87 (325)
T ss_pred             EeCCC
Confidence            99974

>PLN02928 oxidoreductase family protein

Probab=95.95  E-value=0.046  Score=51.03  Aligned_cols=96  Identities=19%  Similarity=0.230  Sum_probs=63.2

Q ss_pred             CCCCEEEEEcCChHHHHHHHHHHHcCCeEEEEeCCchhHHHHHHHcC-----CCEEec-CCCHHHHHHhcCCccEEEEcC
Q 018067          182 KPGMHVGVVGLGGLGHVAVKFAKAMGVKVTVISTSPSKKSEAIERLG-----ADSFLV-SRDQDEMQAAMGTMDGIIDTV  255 (361)
Q Consensus       182 ~~g~~vlV~Gag~vG~~a~~la~~~g~~vi~~~~~~~~~~~~~~~~g-----~~~vv~-~~~~~~~~~~~~g~d~vid~~  255 (361)
                      -.|+++.|+|.|.||..+++.++.+|++|++.+++..+...  ..++     ....++ ......+.++....|+|+.++
T Consensus       157 l~gktvGIiG~G~IG~~vA~~l~afG~~V~~~dr~~~~~~~--~~~~~~~~~~~~~~~~~~~~~~L~ell~~aDiVvl~l  234 (347)
T PLN02928        157 LFGKTVFILGYGAIGIELAKRLRPFGVKLLATRRSWTSEPE--DGLLIPNGDVDDLVDEKGGHEDIYEFAGEADIVVLCC  234 (347)
T ss_pred             CCCCEEEEECCCHHHHHHHHHHhhCCCEEEEECCCCChhhh--hhhccccccccccccccCcccCHHHHHhhCCEEEECC
Confidence            35899999999999999999999999999998876322111  1111     000010 011223445556789998887


Q ss_pred             CCcc-----cHHHHHhccccCCEEEEecC
Q 018067          256 SAVH-----PLMPLIGLLKSQGKLVLVGA  279 (361)
Q Consensus       256 g~~~-----~~~~~~~~l~~~G~~v~~g~  279 (361)
                      ....     .-...+..|+++..+|.++.
T Consensus       235 Plt~~T~~li~~~~l~~Mk~ga~lINvaR  263 (347)
T PLN02928        235 TLTKETAGIVNDEFLSSMKKGALLVNIAR  263 (347)
T ss_pred             CCChHhhcccCHHHHhcCCCCeEEEECCC
Confidence            6321     12357788899999999874

>PF10727 Rossmann-like: Rossmann-like domain; InterPro: IPR019665 This entry represents an NAD/NADP-binding domain with a core Rossmann-type fold, found in an uncharacterised protein family thought to be putative NADP oxidoreductase coenzyme F420-dependent proteins and/or NAD-dependent glycerol-3-phosphate dehydrogenase-like proteins

Probab=95.94  E-value=0.022  Score=44.80  Aligned_cols=81  Identities=17%  Similarity=0.281  Sum_probs=51.2

Q ss_pred             CCEEEEEcCChHHHHHHHHHHHcCCeEEEEeCC-chhHHHHHHHcCCCEEecCCCHHHHHHhcCCccEEEEcCCCcccHH
Q 018067          184 GMHVGVVGLGGLGHVAVKFAKAMGVKVTVISTS-PSKKSEAIERLGADSFLVSRDQDEMQAAMGTMDGIIDTVSAVHPLM  262 (361)
Q Consensus       184 g~~vlV~Gag~vG~~a~~la~~~g~~vi~~~~~-~~~~~~~~~~~g~~~vv~~~~~~~~~~~~~g~d~vid~~g~~~~~~  262 (361)
                      .-+|-|+|+|.+|......++..|..|..+... .+..++++..++...+.+.      .+....+|++|-++.... +.
T Consensus        10 ~l~I~iIGaGrVG~~La~aL~~ag~~v~~v~srs~~sa~~a~~~~~~~~~~~~------~~~~~~aDlv~iavpDda-I~   82 (127)
T PF10727_consen   10 RLKIGIIGAGRVGTALARALARAGHEVVGVYSRSPASAERAAAFIGAGAILDL------EEILRDADLVFIAVPDDA-IA   82 (127)
T ss_dssp             --EEEEECTSCCCCHHHHHHHHTTSEEEEESSCHH-HHHHHHC--TT-----T------TGGGCC-SEEEE-S-CCH-HH
T ss_pred             ccEEEEECCCHHHHHHHHHHHHCCCeEEEEEeCCccccccccccccccccccc------ccccccCCEEEEEechHH-HH
Confidence            356899999999999999999999988877544 4445555555554433221      234457999999999987 77


Q ss_pred             HHHhccccC
Q 018067          263 PLIGLLKSQ  271 (361)
Q Consensus       263 ~~~~~l~~~  271 (361)
                      ..++.|...
T Consensus        83 ~va~~La~~   91 (127)
T PF10727_consen   83 EVAEQLAQY   91 (127)
T ss_dssp             HHHHHHHCC
T ss_pred             HHHHHHHHh
Confidence            777766544

This Rossmann-fold domain consists of 3-layers alpha/beta/alpha, where the six beta strands are parallel in the order 321456.; PDB: 3DFU_A 3C24_A.

>PRK12475 thiamine/molybdopterin biosynthesis MoeB-like protein; Provisional

Probab=95.93  E-value=0.034  Score=51.69  Aligned_cols=77  Identities=22%  Similarity=0.368  Sum_probs=50.2

Q ss_pred             CCCEEEEEcCChHHHHHHHHHHHcCC-eEEEEeCCc---------------------hhHH---HHHHHcCCC----EEe
Q 018067          183 PGMHVGVVGLGGLGHVAVKFAKAMGV-KVTVISTSP---------------------SKKS---EAIERLGAD----SFL  233 (361)
Q Consensus       183 ~g~~vlV~Gag~vG~~a~~la~~~g~-~vi~~~~~~---------------------~~~~---~~~~~~g~~----~vv  233 (361)
                      .+.+|+|+|+|++|..++..+-..|. ++++++...                     .+..   +..+++..+    .+.
T Consensus        23 ~~~~VlIiG~GglGs~va~~La~aGvg~i~lvD~D~ve~sNL~RQ~l~~~~d~~~g~~Ka~aa~~~l~~inp~v~i~~~~  102 (338)
T PRK12475         23 REKHVLIVGAGALGAANAEALVRAGIGKLTIADRDYVEWSNLQRQQLYTEEDAKQKKPKAIAAKEHLRKINSEVEIVPVV  102 (338)
T ss_pred             cCCcEEEECCCHHHHHHHHHHHHcCCCEEEEEcCCcccccccCccccccHHHccCCccHHHHHHHHHHHHCCCcEEEEEe
Confidence            34679999999999999999999998 677676643                     0111   111233321    111


Q ss_pred             cCCCHHHHHHhcCCccEEEEcCCCcc
Q 018067          234 VSRDQDEMQAAMGTMDGIIDTVSAVH  259 (361)
Q Consensus       234 ~~~~~~~~~~~~~g~d~vid~~g~~~  259 (361)
                      ..-.++.+.++..++|+|||+..+..
T Consensus       103 ~~~~~~~~~~~~~~~DlVid~~D~~~  128 (338)
T PRK12475        103 TDVTVEELEELVKEVDLIIDATDNFD  128 (338)
T ss_pred             ccCCHHHHHHHhcCCCEEEEcCCCHH
Confidence            11223456666678999999998765

>TIGR01832 kduD 2-deoxy-D-gluconate 3-dehydrogenase

Probab=95.91  E-value=0.069  Score=47.00  Aligned_cols=75  Identities=21%  Similarity=0.273  Sum_probs=51.0

Q ss_pred             CCCEEEEEcC-ChHHHHHHHHHHHcCCeEEEEeCCch-hHHHHHHHcCCC---EEecCCCHHHHHH----h---cCCccE
Q 018067          183 PGMHVGVVGL-GGLGHVAVKFAKAMGVKVTVISTSPS-KKSEAIERLGAD---SFLVSRDQDEMQA----A---MGTMDG  250 (361)
Q Consensus       183 ~g~~vlV~Ga-g~vG~~a~~la~~~g~~vi~~~~~~~-~~~~~~~~~g~~---~vv~~~~~~~~~~----~---~~g~d~  250 (361)
                      .++++||.|+ |.+|..++..+...|++|++++++.. +.....++.+..   ...|..+.+.+..    +   .+++|+
T Consensus         4 ~~k~vlItGas~gIG~~ia~~l~~~G~~vi~~~r~~~~~~~~~~~~~~~~~~~~~~D~~~~~~~~~~~~~~~~~~~~~d~   83 (248)
T TIGR01832         4 EGKVALVTGANTGLGQGIAVGLAEAGADIVGAGRSEPSETQQQVEALGRRFLSLTADLSDIEAIKALVDSAVEEFGHIDI   83 (248)
T ss_pred             CCCEEEEECCCchHHHHHHHHHHHCCCEEEEEcCchHHHHHHHHHhcCCceEEEECCCCCHHHHHHHHHHHHHHcCCCCE
Confidence            5788999998 99999999999999999999988652 122222344432   1234455443332    1   247999


Q ss_pred             EEEcCCC
Q 018067          251 IIDTVSA  257 (361)
Q Consensus       251 vid~~g~  257 (361)
                      +|+++|.
T Consensus        84 li~~ag~   90 (248)
T TIGR01832        84 LVNNAGI   90 (248)
T ss_pred             EEECCCC
Confidence            9999875

This model describes 2-deoxy-D-gluconate 3-dehydrogenase (also called 2-keto-3-deoxygluconate oxidoreductase), a member of the family of short-chain-alcohol dehydrogenases (pfam00106). This protein has been characterized in Erwinia chrysanthemi as an enzyme of pectin degradation.

>PRK06198 short chain dehydrogenase; Provisional

Probab=95.91  E-value=0.042  Score=48.78  Aligned_cols=75  Identities=19%  Similarity=0.283  Sum_probs=52.7

Q ss_pred             CCCEEEEEcC-ChHHHHHHHHHHHcCCe-EEEEeCCchhHHHHHH---HcCCC---EEecCCCHHHHHHh-------cCC
Q 018067          183 PGMHVGVVGL-GGLGHVAVKFAKAMGVK-VTVISTSPSKKSEAIE---RLGAD---SFLVSRDQDEMQAA-------MGT  247 (361)
Q Consensus       183 ~g~~vlV~Ga-g~vG~~a~~la~~~g~~-vi~~~~~~~~~~~~~~---~~g~~---~vv~~~~~~~~~~~-------~~g  247 (361)
                      .+++++|.|+ |.+|..+++.+...|++ |++++++.++......   ..+..   ..+|..+++.+.++       .++
T Consensus         5 ~~k~vlItGa~g~iG~~la~~l~~~G~~~V~~~~r~~~~~~~~~~~l~~~~~~~~~~~~D~~~~~~~~~~~~~~~~~~g~   84 (260)
T PRK06198          5 DGKVALVTGGTQGLGAAIARAFAERGAAGLVICGRNAEKGEAQAAELEALGAKAVFVQADLSDVEDCRRVVAAADEAFGR   84 (260)
T ss_pred             CCcEEEEeCCCchHHHHHHHHHHHCCCCeEEEEcCCHHHHHHHHHHHHhcCCeEEEEEccCCCHHHHHHHHHHHHHHhCC
Confidence            5688999998 99999999999999998 9988887665543332   23432   22355555443332       147


Q ss_pred             ccEEEEcCCC
Q 018067          248 MDGIIDTVSA  257 (361)
Q Consensus       248 ~d~vid~~g~  257 (361)
                      +|++|+++|.
T Consensus        85 id~li~~ag~   94 (260)
T PRK06198         85 LDALVNAAGL   94 (260)
T ss_pred             CCEEEECCCc
Confidence            9999999985

>PRK08251 short chain dehydrogenase; Provisional

Probab=95.91  E-value=0.047  Score=48.11  Aligned_cols=74  Identities=20%  Similarity=0.302  Sum_probs=51.5

Q ss_pred             CCEEEEEcC-ChHHHHHHHHHHHcCCeEEEEeCCchhHHHHHHHc-----CCC-E--EecCCCHHHHHH-------hcCC
Q 018067          184 GMHVGVVGL-GGLGHVAVKFAKAMGVKVTVISTSPSKKSEAIERL-----GAD-S--FLVSRDQDEMQA-------AMGT  247 (361)
Q Consensus       184 g~~vlV~Ga-g~vG~~a~~la~~~g~~vi~~~~~~~~~~~~~~~~-----g~~-~--vv~~~~~~~~~~-------~~~g  247 (361)
                      +++++|.|+ |++|...++.+...|++|++++++.++...+.+.+     +.. .  ..|..+++.+..       ..++
T Consensus         2 ~k~vlItGas~giG~~la~~l~~~g~~v~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~~D~~~~~~~~~~~~~~~~~~~~   81 (248)
T PRK08251          2 RQKILITGASSGLGAGMAREFAAKGRDLALCARRTDRLEELKAELLARYPGIKVAVAALDVNDHDQVFEVFAEFRDELGG   81 (248)
T ss_pred             CCEEEEECCCCHHHHHHHHHHHHcCCEEEEEeCCHHHHHHHHHHHHhhCCCceEEEEEcCCCCHHHHHHHHHHHHHHcCC
Confidence            467999997 99999999988888999999999887665554332     211 1  235555443322       2247


Q ss_pred             ccEEEEcCCC
Q 018067          248 MDGIIDTVSA  257 (361)
Q Consensus       248 ~d~vid~~g~  257 (361)
                      +|++|.++|.
T Consensus        82 id~vi~~ag~   91 (248)
T PRK08251         82 LDRVIVNAGI   91 (248)
T ss_pred             CCEEEECCCc
Confidence            9999999874

>PRK14173 bifunctional 5,10-methylene-tetrahydrofolate dehydrogenase/ 5,10-methylene-tetrahydrofolate cyclohydrolase; Provisional

Probab=95.91  E-value=0.073  Score=47.86  Aligned_cols=95  Identities=21%  Similarity=0.255  Sum_probs=73.5

Q ss_pred             ccchhhhhhhhHhhhcCCCCCCCEEEEEcC-ChHHHHHHHHHHHcCCeEEEEeCCchhHHHHHHHcCCCEEecCCCHHHH
Q 018067          163 PLLCAGITVYSPLRFYGLDKPGMHVGVVGL-GGLGHVAVKFAKAMGVKVTVISTSPSKKSEAIERLGADSFLVSRDQDEM  241 (361)
Q Consensus       163 ~l~~~~~ta~~~l~~~~~~~~g~~vlV~Ga-g~vG~~a~~la~~~g~~vi~~~~~~~~~~~~~~~~g~~~vv~~~~~~~~  241 (361)
                      ..||+..+....++...---.|++|+|+|. ..+|.=.+.++...|++|++..+....                     +
T Consensus       134 ~~PcTp~avi~lL~~~~i~l~Gk~vvViGrS~iVGkPla~lL~~~~aTVtichs~T~~---------------------l  192 (287)
T PRK14173        134 LEPCTPAGVVRLLKHYGIPLAGKEVVVVGRSNIVGKPLAALLLREDATVTLAHSKTQD---------------------L  192 (287)
T ss_pred             CCCCCHHHHHHHHHHcCCCCCCCEEEEECCCCccHHHHHHHHHHCCCEEEEeCCCCCC---------------------H
Confidence            567777777777877764358999999997 889999999999999999876654322                     2


Q ss_pred             HHhcCCccEEEEcCCCcccHHHHHhccccCCEEEEecCC
Q 018067          242 QAAMGTMDGIIDTVSAVHPLMPLIGLLKSQGKLVLVGAP  280 (361)
Q Consensus       242 ~~~~~g~d~vid~~g~~~~~~~~~~~l~~~G~~v~~g~~  280 (361)
                      .+.+..+|+++-++|.+..+  --+.+++|..++.+|..
T Consensus       193 ~~~~~~ADIvIsAvGkp~~i--~~~~vk~GavVIDVGin  229 (287)
T PRK14173        193 PAVTRRADVLVVAVGRPHLI--TPEMVRPGAVVVDVGIN  229 (287)
T ss_pred             HHHHhhCCEEEEecCCcCcc--CHHHcCCCCEEEEccCc
Confidence            23344589999999998743  46778999999999975

>TIGR02356 adenyl_thiF thiazole biosynthesis adenylyltransferase ThiF, E

Probab=95.91  E-value=0.031  Score=47.94  Aligned_cols=77  Identities=22%  Similarity=0.394  Sum_probs=49.2

Q ss_pred             CCCEEEEEcCChHHHHHHHHHHHcCC-eEEEEeCCch-------------------hHHHHH---HHcCCC-EE--ecC-
Q 018067          183 PGMHVGVVGLGGLGHVAVKFAKAMGV-KVTVISTSPS-------------------KKSEAI---ERLGAD-SF--LVS-  235 (361)
Q Consensus       183 ~g~~vlV~Gag~vG~~a~~la~~~g~-~vi~~~~~~~-------------------~~~~~~---~~~g~~-~v--v~~-  235 (361)
                      ...+|+|+|+|++|..++..+...|. ++++++...-                   |...++   +++... .+  ++. 
T Consensus        20 ~~~~VlviG~GglGs~ia~~La~~Gv~~i~lvD~d~ve~sNL~Rq~l~~~~diG~~Ka~~~~~~l~~~np~v~i~~~~~~   99 (202)
T TIGR02356        20 LNSHVLIIGAGGLGSPAALYLAGAGVGTIVIVDDDHVDLSNLQRQILFTEEDVGRPKVEVAAQRLRELNSDIQVTALKER   99 (202)
T ss_pred             cCCCEEEECCCHHHHHHHHHHHHcCCCeEEEecCCEEcccchhhhhccChhhCCChHHHHHHHHHHHhCCCCEEEEehhc
Confidence            34679999999999999999999998 7777776521                   111111   222211 11  111 


Q ss_pred             CCHHHHHHhcCCccEEEEcCCCcc
Q 018067          236 RDQDEMQAAMGTMDGIIDTVSAVH  259 (361)
Q Consensus       236 ~~~~~~~~~~~g~d~vid~~g~~~  259 (361)
                      -+++.+.++..++|+||+|..+..
T Consensus       100 i~~~~~~~~~~~~D~Vi~~~d~~~  123 (202)
T TIGR02356       100 VTAENLELLINNVDLVLDCTDNFA  123 (202)
T ss_pred             CCHHHHHHHHhCCCEEEECCCCHH
Confidence            122344555678999999998865

coli subfamily. Members of the HesA/MoeB/ThiF family of proteins (pfam00899) include a number of members encoded in the midst of thiamine biosynthetic operons. This mix of known and putative ThiF proteins shows a deep split in phylogenetic trees, with the Escherichia. coli ThiF and the E. coli MoeB proteins seemingly more closely related than E. coli ThiF and Campylobacter (for example) ThiF. This model represents the more widely distributed clade of ThiF proteins such found in E. coli.

>PF05368 NmrA: NmrA-like family; InterPro: IPR008030 NmrA is a negative transcriptional regulator involved in the post-translational modification of the transcription factor AreA

Probab=95.88  E-value=0.067  Score=46.77  Aligned_cols=71  Identities=23%  Similarity=0.387  Sum_probs=54.6

Q ss_pred             EEEEcC-ChHHHHHHHHHHHcCCeEEEEeCCchh-HHHHHHHcCCCE-EecCCCHHHHHHhcCCccEEEEcCCC
Q 018067          187 VGVVGL-GGLGHVAVKFAKAMGVKVTVISTSPSK-KSEAIERLGADS-FLVSRDQDEMQAAMGTMDGIIDTVSA  257 (361)
Q Consensus       187 vlV~Ga-g~vG~~a~~la~~~g~~vi~~~~~~~~-~~~~~~~~g~~~-vv~~~~~~~~~~~~~g~d~vid~~g~  257 (361)
                      |+|+|+ |.+|..+++.+...+.+|.+++|+... .....+..|+.. ..|+.+.+.+.+...|+|.||.+.+.
T Consensus         1 I~V~GatG~~G~~v~~~L~~~~~~V~~l~R~~~~~~~~~l~~~g~~vv~~d~~~~~~l~~al~g~d~v~~~~~~   74 (233)
T PF05368_consen    1 ILVTGATGNQGRSVVRALLSAGFSVRALVRDPSSDRAQQLQALGAEVVEADYDDPESLVAALKGVDAVFSVTPP   74 (233)
T ss_dssp             EEEETTTSHHHHHHHHHHHHTTGCEEEEESSSHHHHHHHHHHTTTEEEES-TT-HHHHHHHHTTCSEEEEESSC
T ss_pred             CEEECCccHHHHHHHHHHHhCCCCcEEEEeccchhhhhhhhcccceEeecccCCHHHHHHHHcCCceEEeecCc
Confidence            789998 999999999999999999999998743 222235678753 23566677888888899999999984

NmrA is part of a system controlling nitrogen metabolite repression in fungi []. This family only contains a few sequences as iteration results in significant matches to other Rossmann fold families.; PDB: 2ZCV_A 2ZCU_A 2R6J_B 3C3X_A 2QZZ_B 2QYS_A 2QX7_A 2QW8_A 2R2G_B 3E5M_B ....

>PRK08703 short chain dehydrogenase; Provisional

Probab=95.87  E-value=0.059  Score=47.23  Aligned_cols=44  Identities=23%  Similarity=0.310  Sum_probs=36.7

Q ss_pred             CCCEEEEEcC-ChHHHHHHHHHHHcCCeEEEEeCCchhHHHHHHH
Q 018067          183 PGMHVGVVGL-GGLGHVAVKFAKAMGVKVTVISTSPSKKSEAIER  226 (361)
Q Consensus       183 ~g~~vlV~Ga-g~vG~~a~~la~~~g~~vi~~~~~~~~~~~~~~~  226 (361)
                      ++++++|.|+ |.+|...++.+...|++|++++++.++...+.++
T Consensus         5 ~~k~vlItG~sggiG~~la~~l~~~g~~V~~~~r~~~~~~~~~~~   49 (239)
T PRK08703          5 SDKTILVTGASQGLGEQVAKAYAAAGATVILVARHQKKLEKVYDA   49 (239)
T ss_pred             CCCEEEEECCCCcHHHHHHHHHHHcCCEEEEEeCChHHHHHHHHH
Confidence            4678999997 9999999999999999999999988766555443

>PRK13243 glyoxylate reductase; Reviewed

Probab=95.87  E-value=0.061  Score=49.92  Aligned_cols=88  Identities=23%  Similarity=0.347  Sum_probs=62.1

Q ss_pred             CCCEEEEEcCChHHHHHHHHHHHcCCeEEEEeCCchhHHHHHHHcCCCEEecCCCHHHHHHhcCCccEEEEcCCCcc---
Q 018067          183 PGMHVGVVGLGGLGHVAVKFAKAMGVKVTVISTSPSKKSEAIERLGADSFLVSRDQDEMQAAMGTMDGIIDTVSAVH---  259 (361)
Q Consensus       183 ~g~~vlV~Gag~vG~~a~~la~~~g~~vi~~~~~~~~~~~~~~~~g~~~vv~~~~~~~~~~~~~g~d~vid~~g~~~---  259 (361)
                      .|++|.|+|.|.+|...++.++.+|++|++.++..+..  ..+.++...    .   .+.++....|+|+-++....   
T Consensus       149 ~gktvgIiG~G~IG~~vA~~l~~~G~~V~~~d~~~~~~--~~~~~~~~~----~---~l~ell~~aDiV~l~lP~t~~T~  219 (333)
T PRK13243        149 YGKTIGIIGFGRIGQAVARRAKGFGMRILYYSRTRKPE--AEKELGAEY----R---PLEELLRESDFVSLHVPLTKETY  219 (333)
T ss_pred             CCCEEEEECcCHHHHHHHHHHHHCCCEEEEECCCCChh--hHHHcCCEe----c---CHHHHHhhCCEEEEeCCCChHHh
Confidence            68999999999999999999999999999988765432  223444321    1   12334456888888776422   


Q ss_pred             --cHHHHHhccccCCEEEEecC
Q 018067          260 --PLMPLIGLLKSQGKLVLVGA  279 (361)
Q Consensus       260 --~~~~~~~~l~~~G~~v~~g~  279 (361)
                        .-...+..++++..++.++.
T Consensus       220 ~~i~~~~~~~mk~ga~lIN~aR  241 (333)
T PRK13243        220 HMINEERLKLMKPTAILVNTAR  241 (333)
T ss_pred             hccCHHHHhcCCCCeEEEECcC
Confidence              11356778888888888874

>PRK15181 Vi polysaccharide biosynthesis protein TviC; Provisional

Probab=95.87  E-value=0.058  Score=50.40  Aligned_cols=87  Identities=14%  Similarity=0.049  Sum_probs=57.1

Q ss_pred             hhhhHhhhcCCCCCCCEEEEEcC-ChHHHHHHHHHHHcCCeEEEEeCCchhHHH----HHHHcC------CCEE-ecCCC
Q 018067          170 TVYSPLRFYGLDKPGMHVGVVGL-GGLGHVAVKFAKAMGVKVTVISTSPSKKSE----AIERLG------ADSF-LVSRD  237 (361)
Q Consensus       170 ta~~~l~~~~~~~~g~~vlV~Ga-g~vG~~a~~la~~~g~~vi~~~~~~~~~~~----~~~~~g------~~~v-v~~~~  237 (361)
                      |||.-++.... -.+++|||.|+ |-+|...+..+...|.+|+++++.......    .....+      ...+ .|..+
T Consensus         2 ~~~~~~~~~~~-~~~~~vlVtGatGfiG~~lv~~L~~~g~~V~~~d~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~Di~d   80 (348)
T PRK15181          2 TAYEELRTKLV-LAPKRWLITGVAGFIGSGLLEELLFLNQTVIGLDNFSTGYQHNLDDVRTSVSEEQWSRFIFIQGDIRK   80 (348)
T ss_pred             chhhhhhhccc-ccCCEEEEECCccHHHHHHHHHHHHCCCEEEEEeCCCCcchhhhhhhhhccccccCCceEEEEccCCC
Confidence            56766655443 34578999997 999999999999999999999875432211    111111      1111 24445


Q ss_pred             HHHHHHhcCCccEEEEcCCC
Q 018067          238 QDEMQAAMGTMDGIIDTVSA  257 (361)
Q Consensus       238 ~~~~~~~~~g~d~vid~~g~  257 (361)
                      .+.+..+..++|+||.+++.
T Consensus        81 ~~~l~~~~~~~d~ViHlAa~  100 (348)
T PRK15181         81 FTDCQKACKNVDYVLHQAAL  100 (348)
T ss_pred             HHHHHHHhhCCCEEEECccc
Confidence            55555656689999999863

>PRK07454 short chain dehydrogenase; Provisional

Probab=95.86  E-value=0.044  Score=48.09  Aligned_cols=76  Identities=13%  Similarity=0.216  Sum_probs=53.1

Q ss_pred             CCCCEEEEEcC-ChHHHHHHHHHHHcCCeEEEEeCCchhHHHHHHHc---CCC---EEecCCCHHHHHHh-------cCC
Q 018067          182 KPGMHVGVVGL-GGLGHVAVKFAKAMGVKVTVISTSPSKKSEAIERL---GAD---SFLVSRDQDEMQAA-------MGT  247 (361)
Q Consensus       182 ~~g~~vlV~Ga-g~vG~~a~~la~~~g~~vi~~~~~~~~~~~~~~~~---g~~---~vv~~~~~~~~~~~-------~~g  247 (361)
                      ..+++++|.|+ |.+|..++..+...|++|++++++.++...+.+++   +..   ...|..+.+.+..+       .++
T Consensus         4 ~~~k~vlItG~sg~iG~~la~~l~~~G~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~D~~~~~~~~~~~~~~~~~~~~   83 (241)
T PRK07454          4 NSMPRALITGASSGIGKATALAFAKAGWDLALVARSQDALEALAAELRSTGVKAAAYSIDLSNPEAIAPGIAELLEQFGC   83 (241)
T ss_pred             CCCCEEEEeCCCchHHHHHHHHHHHCCCEEEEEeCCHHHHHHHHHHHHhCCCcEEEEEccCCCHHHHHHHHHHHHHHcCC
Confidence            34578999997 99999999999999999999999877655554332   222   12344454433222       246


Q ss_pred             ccEEEEcCCC
Q 018067          248 MDGIIDTVSA  257 (361)
Q Consensus       248 ~d~vid~~g~  257 (361)
                      +|++|.++|.
T Consensus        84 id~lv~~ag~   93 (241)
T PRK07454         84 PDVLINNAGM   93 (241)
T ss_pred             CCEEEECCCc
Confidence            9999999985

>PRK06079 enoyl-(acyl carrier protein) reductase; Provisional

Probab=95.85  E-value=0.051  Score=48.22  Aligned_cols=74  Identities=15%  Similarity=0.312  Sum_probs=49.5

Q ss_pred             CCCEEEEEcCC---hHHHHHHHHHHHcCCeEEEEeCCchhHHHHHHHcCC-C---EEecCCCHHHHHH----h---cCCc
Q 018067          183 PGMHVGVVGLG---GLGHVAVKFAKAMGVKVTVISTSPSKKSEAIERLGA-D---SFLVSRDQDEMQA----A---MGTM  248 (361)
Q Consensus       183 ~g~~vlV~Gag---~vG~~a~~la~~~g~~vi~~~~~~~~~~~~~~~~g~-~---~vv~~~~~~~~~~----~---~~g~  248 (361)
                      .|++++|.|++   ++|.++++.+...|++|+++.+++ +.....+++.. .   ...|-.+++.+.+    +   .+.+
T Consensus         6 ~~k~~lItGas~~~gIG~a~a~~la~~G~~Vi~~~r~~-~~~~~~~~~~~~~~~~~~~Dl~~~~~v~~~~~~~~~~~g~i   84 (252)
T PRK06079          6 SGKKIVVMGVANKRSIAWGCAQAIKDQGATVIYTYQND-RMKKSLQKLVDEEDLLVECDVASDESIERAFATIKERVGKI   84 (252)
T ss_pred             CCCEEEEeCCCCCCchHHHHHHHHHHCCCEEEEecCch-HHHHHHHhhccCceeEEeCCCCCHHHHHHHHHHHHHHhCCC
Confidence            57889999874   899999999999999999988763 33333333321 1   1234444443332    2   2469


Q ss_pred             cEEEEcCCC
Q 018067          249 DGIIDTVSA  257 (361)
Q Consensus       249 d~vid~~g~  257 (361)
                      |++|+++|.
T Consensus        85 D~lv~nAg~   93 (252)
T PRK06079         85 DGIVHAIAY   93 (252)
T ss_pred             CEEEEcccc
Confidence            999999874

>PRK04457 spermidine synthase; Provisional

Probab=95.84  E-value=0.16  Score=45.36  Aligned_cols=95  Identities=18%  Similarity=0.215  Sum_probs=62.6

Q ss_pred             CCCCEEEEEcCChHHHHHHHHHHHc-CCeEEEEeCCchhHHHHHHHcCCC------EEecCCCHHHHHHhcCCccEEE-E
Q 018067          182 KPGMHVGVVGLGGLGHVAVKFAKAM-GVKVTVISTSPSKKSEAIERLGAD------SFLVSRDQDEMQAAMGTMDGII-D  253 (361)
Q Consensus       182 ~~g~~vlV~Gag~vG~~a~~la~~~-g~~vi~~~~~~~~~~~~~~~~g~~------~vv~~~~~~~~~~~~~g~d~vi-d  253 (361)
                      .++++||++|+|. |.++..+++.. +.++++++.+++-.+.+.+.++..      .++..+..+.+....+.+|+|+ |
T Consensus        65 ~~~~~vL~IG~G~-G~l~~~l~~~~p~~~v~~VEidp~vi~~A~~~f~~~~~~~rv~v~~~Da~~~l~~~~~~yD~I~~D  143 (262)
T PRK04457         65 PRPQHILQIGLGG-GSLAKFIYTYLPDTRQTAVEINPQVIAVARNHFELPENGERFEVIEADGAEYIAVHRHSTDVILVD  143 (262)
T ss_pred             CCCCEEEEECCCH-hHHHHHHHHhCCCCeEEEEECCHHHHHHHHHHcCCCCCCCceEEEECCHHHHHHhCCCCCCEEEEe
Confidence            4567899999875 77888888876 468888888777655544444421      2233322344554455799985 4


Q ss_pred             cCCC---------cccHHHHHhccccCCEEEEe
Q 018067          254 TVSA---------VHPLMPLIGLLKSQGKLVLV  277 (361)
Q Consensus       254 ~~g~---------~~~~~~~~~~l~~~G~~v~~  277 (361)
                      ....         ...+..+.+.|+++|.++.-
T Consensus       144 ~~~~~~~~~~l~t~efl~~~~~~L~pgGvlvin  176 (262)
T PRK04457        144 GFDGEGIIDALCTQPFFDDCRNALSSDGIFVVN  176 (262)
T ss_pred             CCCCCCCccccCcHHHHHHHHHhcCCCcEEEEE
Confidence            3221         23467888999999999873

>PRK10258 biotin biosynthesis protein BioC; Provisional

Probab=95.84  E-value=0.28  Score=43.48  Aligned_cols=154  Identities=16%  Similarity=0.152  Sum_probs=82.9

Q ss_pred             CCCCEEEEEcCChHHHHHHHHHHHcCCeEEEEeCCchhHHHHHHHcCCCEEecCCCHHHHHHhcCCccEEEEcCCC----
Q 018067          182 KPGMHVGVVGLGGLGHVAVKFAKAMGVKVTVISTSPSKKSEAIERLGADSFLVSRDQDEMQAAMGTMDGIIDTVSA----  257 (361)
Q Consensus       182 ~~g~~vlV~Gag~vG~~a~~la~~~g~~vi~~~~~~~~~~~~~~~~g~~~vv~~~~~~~~~~~~~g~d~vid~~g~----  257 (361)
                      .++.+||-+|+|. |..+..+++ .|.+++.++.+++..+...+.......+..+- +......+.+|+|+....-    
T Consensus        41 ~~~~~vLDiGcG~-G~~~~~l~~-~~~~v~~~D~s~~~l~~a~~~~~~~~~~~~d~-~~~~~~~~~fD~V~s~~~l~~~~  117 (251)
T PRK10258         41 RKFTHVLDAGCGP-GWMSRYWRE-RGSQVTALDLSPPMLAQARQKDAADHYLAGDI-ESLPLATATFDLAWSNLAVQWCG  117 (251)
T ss_pred             cCCCeEEEeeCCC-CHHHHHHHH-cCCeEEEEECCHHHHHHHHhhCCCCCEEEcCc-ccCcCCCCcEEEEEECchhhhcC
Confidence            4678899999875 666555554 58899999998877655533332222221111 1111112369999865432    


Q ss_pred             --cccHHHHHhccccCCEEEEecCCCCCcccChHHHHhC-CcEEEecccCCHHHHHHHHHHHHcCCCceeE--EEEeccc
Q 018067          258 --VHPLMPLIGLLKSQGKLVLVGAPEKPLELPAFSLLMG-RKIVGGSMIGGMKETQEMIDFAAKHNIRADI--EVIPADY  332 (361)
Q Consensus       258 --~~~~~~~~~~l~~~G~~v~~g~~~~~~~~~~~~~~~~-~~~i~g~~~~~~~~~~~~~~ll~~~~~~~~~--~~~~l~~  332 (361)
                        ...+..+.+.|+++|.++......+.+.- ....+.. ...-......+   .+++.+++....+....  .+..+++
T Consensus       118 d~~~~l~~~~~~Lk~gG~l~~~~~~~~~~~e-l~~~~~~~~~~~~~~~~~~---~~~l~~~l~~~~~~~~~~~~~~~f~~  193 (251)
T PRK10258        118 NLSTALRELYRVVRPGGVVAFTTLVQGSLPE-LHQAWQAVDERPHANRFLP---PDAIEQALNGWRYQHHIQPITLWFDD  193 (251)
T ss_pred             CHHHHHHHHHHHcCCCeEEEEEeCCCCchHH-HHHHHHHhccCCccccCCC---HHHHHHHHHhCCceeeeeEEEEECCC
Confidence              23467788899999999987543322110 0111100 00001112223   33444444444444333  4667888


Q ss_pred             HHHHHHHHHc
Q 018067          333 VNTALERLAK  342 (361)
Q Consensus       333 ~~~a~~~~~~  342 (361)
                      ..+.++.++.
T Consensus       194 ~~~~l~~lk~  203 (251)
T PRK10258        194 ALSAMRSLKG  203 (251)
T ss_pred             HHHHHHHHHH
Confidence            8888887764

>PRK14170 bifunctional 5,10-methylene-tetrahydrofolate dehydrogenase/ 5,10-methylene-tetrahydrofolate cyclohydrolase; Provisional

Probab=95.84  E-value=0.075  Score=47.68  Aligned_cols=95  Identities=13%  Similarity=0.148  Sum_probs=73.6

Q ss_pred             ccchhhhhhhhHhhhcCCCCCCCEEEEEcC-ChHHHHHHHHHHHcCCeEEEEeCCchhHHHHHHHcCCCEEecCCCHHHH
Q 018067          163 PLLCAGITVYSPLRFYGLDKPGMHVGVVGL-GGLGHVAVKFAKAMGVKVTVISTSPSKKSEAIERLGADSFLVSRDQDEM  241 (361)
Q Consensus       163 ~l~~~~~ta~~~l~~~~~~~~g~~vlV~Ga-g~vG~~a~~la~~~g~~vi~~~~~~~~~~~~~~~~g~~~vv~~~~~~~~  241 (361)
                      .+||+..+....++...---.|++|+|+|. ..+|.=.+.++...+++|++..+....                     +
T Consensus       136 ~~PcTp~avi~lL~~~~i~l~Gk~vvVvGrS~iVGkPla~lL~~~~atVtichs~T~~---------------------l  194 (284)
T PRK14170        136 FVPCTPAGIIELIKSTGTQIEGKRAVVIGRSNIVGKPVAQLLLNENATVTIAHSRTKD---------------------L  194 (284)
T ss_pred             CCCCCHHHHHHHHHHhCCCCCCCEEEEECCCCcchHHHHHHHHHCCCEEEEeCCCCCC---------------------H
Confidence            567777777777877764458999999996 789999999999999999876554322                     2


Q ss_pred             HHhcCCccEEEEcCCCcccHHHHHhccccCCEEEEecCC
Q 018067          242 QAAMGTMDGIIDTVSAVHPLMPLIGLLKSQGKLVLVGAP  280 (361)
Q Consensus       242 ~~~~~g~d~vid~~g~~~~~~~~~~~l~~~G~~v~~g~~  280 (361)
                      .+....+|+++-++|.+..  ---+.+++|..++.+|..
T Consensus       195 ~~~~~~ADIvI~AvG~~~~--i~~~~vk~GavVIDvGin  231 (284)
T PRK14170        195 PQVAKEADILVVATGLAKF--VKKDYIKPGAIVIDVGMD  231 (284)
T ss_pred             HHHHhhCCEEEEecCCcCc--cCHHHcCCCCEEEEccCc
Confidence            2334458999999999873  335778999999999975

>PRK05447 1-deoxy-D-xylulose 5-phosphate reductoisomerase; Provisional

Probab=95.83  E-value=0.099  Score=48.94  Aligned_cols=92  Identities=13%  Similarity=0.325  Sum_probs=67.6

Q ss_pred             CEEEEEcC-ChHHHHHHHHHHHc--CCeEEEEe--CCchhHHHHHHHcCCCEEecCCCH--HHHH---------------
Q 018067          185 MHVGVVGL-GGLGHVAVKFAKAM--GVKVTVIS--TSPSKKSEAIERLGADSFLVSRDQ--DEMQ---------------  242 (361)
Q Consensus       185 ~~vlV~Ga-g~vG~~a~~la~~~--g~~vi~~~--~~~~~~~~~~~~~g~~~vv~~~~~--~~~~---------------  242 (361)
                      ++|.|+|+ |.||..++.+.+..  .++|+.++  ++.++..+.+++|+...++..+..  ..++               
T Consensus         2 k~VaILGsTGSIG~~tL~vi~~~p~~f~VvaLaa~~n~~~l~~q~~~f~p~~v~i~~~~~~~~l~~~l~~~~~~v~~G~~   81 (385)
T PRK05447          2 KRITILGSTGSIGTQTLDVIRRNPDRFRVVALSAGKNVELLAEQAREFRPKYVVVADEEAAKELKEALAAAGIEVLAGEE   81 (385)
T ss_pred             ceEEEEcCChHHHHHHHHHHHhCccccEEEEEEcCCCHHHHHHHHHHhCCCEEEEcCHHHHHHHHHhhccCCceEEEChh
Confidence            47899997 99999999998875  56887775  556678888899998765544432  1111               


Q ss_pred             ---Hhc--CCccEEEEcCCCcccHHHHHhccccCCEEEE
Q 018067          243 ---AAM--GTMDGIIDTVSAVHPLMPLIGLLKSQGKLVL  276 (361)
Q Consensus       243 ---~~~--~g~d~vid~~g~~~~~~~~~~~l~~~G~~v~  276 (361)
                         ++.  ..+|+|++++++...+...+..++.|-++.+
T Consensus        82 ~~~~l~~~~~vD~Vv~Ai~G~aGl~ptl~Ai~aGK~VaL  120 (385)
T PRK05447         82 GLCELAALPEADVVVAAIVGAAGLLPTLAAIRAGKRIAL  120 (385)
T ss_pred             HHHHHhcCCCCCEEEEeCcCcccHHHHHHHHHCCCcEEE
Confidence               111  1589999999987778888888888777665

>PRK06914 short chain dehydrogenase; Provisional

Probab=95.83  E-value=0.046  Score=49.21  Aligned_cols=74  Identities=19%  Similarity=0.285  Sum_probs=51.5

Q ss_pred             CCEEEEEcC-ChHHHHHHHHHHHcCCeEEEEeCCchhHHHHHHH---cCC--C-E--EecCCCHHHHHH---h---cCCc
Q 018067          184 GMHVGVVGL-GGLGHVAVKFAKAMGVKVTVISTSPSKKSEAIER---LGA--D-S--FLVSRDQDEMQA---A---MGTM  248 (361)
Q Consensus       184 g~~vlV~Ga-g~vG~~a~~la~~~g~~vi~~~~~~~~~~~~~~~---~g~--~-~--vv~~~~~~~~~~---~---~~g~  248 (361)
                      ++++||.|+ |.+|...+..+...|++|++++++.++...+.+.   .+.  . .  ..|..+++.+..   +   .+++
T Consensus         3 ~k~~lItGasg~iG~~la~~l~~~G~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~~D~~d~~~~~~~~~~~~~~~~i   82 (280)
T PRK06914          3 KKIAIVTGASSGFGLLTTLELAKKGYLVIATMRNPEKQENLLSQATQLNLQQNIKVQQLDVTDQNSIHNFQLVLKEIGRI   82 (280)
T ss_pred             CCEEEEECCCchHHHHHHHHHHhCCCEEEEEeCCHHHHHHHHHHHHhcCCCCceeEEecCCCCHHHHHHHHHHHHhcCCe
Confidence            567999997 9999999999999999999999887665444332   221  1 1  235555544332   1   2478


Q ss_pred             cEEEEcCCC
Q 018067          249 DGIIDTVSA  257 (361)
Q Consensus       249 d~vid~~g~  257 (361)
                      |+++.++|.
T Consensus        83 d~vv~~ag~   91 (280)
T PRK06914         83 DLLVNNAGY   91 (280)
T ss_pred             eEEEECCcc
Confidence            999999874

>PRK14186 bifunctional 5,10-methylene-tetrahydrofolate dehydrogenase/ 5,10-methylene-tetrahydrofolate cyclohydrolase; Provisional

Probab=95.82  E-value=0.085  Score=47.70  Aligned_cols=95  Identities=19%  Similarity=0.132  Sum_probs=72.6

Q ss_pred             ccchhhhhhhhHhhhcCCCCCCCEEEEEcC-ChHHHHHHHHHHHcCCeEEEEeCCchhHHHHHHHcCCCEEecCCCHHHH
Q 018067          163 PLLCAGITVYSPLRFYGLDKPGMHVGVVGL-GGLGHVAVKFAKAMGVKVTVISTSPSKKSEAIERLGADSFLVSRDQDEM  241 (361)
Q Consensus       163 ~l~~~~~ta~~~l~~~~~~~~g~~vlV~Ga-g~vG~~a~~la~~~g~~vi~~~~~~~~~~~~~~~~g~~~vv~~~~~~~~  241 (361)
                      ..||+..+.+..++...---.|++|+|+|. ..+|.=.+.++...|++|++..+.....                     
T Consensus       137 ~~PcTp~aii~lL~~~~i~l~Gk~vvVIGrS~iVGkPla~lL~~~~atVtv~hs~T~~l---------------------  195 (297)
T PRK14186        137 LRSCTPAGVMRLLRSQQIDIAGKKAVVVGRSILVGKPLALMLLAANATVTIAHSRTQDL---------------------  195 (297)
T ss_pred             CCCCCHHHHHHHHHHhCCCCCCCEEEEECCCccchHHHHHHHHHCCCEEEEeCCCCCCH---------------------
Confidence            456777777777777664458999999996 8899999999999999998775543322                     


Q ss_pred             HHhcCCccEEEEcCCCcccHHHHHhccccCCEEEEecCC
Q 018067          242 QAAMGTMDGIIDTVSAVHPLMPLIGLLKSQGKLVLVGAP  280 (361)
Q Consensus       242 ~~~~~g~d~vid~~g~~~~~~~~~~~l~~~G~~v~~g~~  280 (361)
                      .+.+..+|+++-++|.+..  .--+.+++|..++.+|..
T Consensus       196 ~~~~~~ADIvIsAvGkp~~--i~~~~ik~gavVIDvGin  232 (297)
T PRK14186        196 ASITREADILVAAAGRPNL--IGAEMVKPGAVVVDVGIH  232 (297)
T ss_pred             HHHHhhCCEEEEccCCcCc--cCHHHcCCCCEEEEeccc
Confidence            2333458999999998873  336788999999999965

>PRK08628 short chain dehydrogenase; Provisional

Probab=95.82  E-value=0.069  Score=47.36  Aligned_cols=74  Identities=20%  Similarity=0.262  Sum_probs=51.4

Q ss_pred             CCCEEEEEcC-ChHHHHHHHHHHHcCCeEEEEeCCchhHHHHHHH---cCCC---EEecCCCHHHHHHh-------cCCc
Q 018067          183 PGMHVGVVGL-GGLGHVAVKFAKAMGVKVTVISTSPSKKSEAIER---LGAD---SFLVSRDQDEMQAA-------MGTM  248 (361)
Q Consensus       183 ~g~~vlV~Ga-g~vG~~a~~la~~~g~~vi~~~~~~~~~~~~~~~---~g~~---~vv~~~~~~~~~~~-------~~g~  248 (361)
                      ++.++||.|+ |.+|...++.+...|++|+++++++++. .+.++   .+..   ...|..+++.+..+       .+++
T Consensus         6 ~~~~ilItGasggiG~~la~~l~~~G~~v~~~~r~~~~~-~~~~~~~~~~~~~~~~~~D~~~~~~~~~~~~~~~~~~~~i   84 (258)
T PRK08628          6 KDKVVIVTGGASGIGAAISLRLAEEGAIPVIFGRSAPDD-EFAEELRALQPRAEFVQVDLTDDAQCRDAVEQTVAKFGRI   84 (258)
T ss_pred             CCCEEEEeCCCChHHHHHHHHHHHcCCcEEEEcCChhhH-HHHHHHHhcCCceEEEEccCCCHHHHHHHHHHHHHhcCCC
Confidence            4678999997 9999999999999999999998887654 33233   2322   12344444433322       1479


Q ss_pred             cEEEEcCCC
Q 018067          249 DGIIDTVSA  257 (361)
Q Consensus       249 d~vid~~g~  257 (361)
                      |++|.++|.
T Consensus        85 d~vi~~ag~   93 (258)
T PRK08628         85 DGLVNNAGV   93 (258)
T ss_pred             CEEEECCcc
Confidence            999999984

>PLN02516 methylenetetrahydrofolate dehydrogenase (NADP+)

Probab=95.82  E-value=0.089  Score=47.56  Aligned_cols=96  Identities=18%  Similarity=0.161  Sum_probs=73.9

Q ss_pred             cccchhhhhhhhHhhhcCCCCCCCEEEEEcC-ChHHHHHHHHHHHcCCeEEEEeCCchhHHHHHHHcCCCEEecCCCHHH
Q 018067          162 APLLCAGITVYSPLRFYGLDKPGMHVGVVGL-GGLGHVAVKFAKAMGVKVTVISTSPSKKSEAIERLGADSFLVSRDQDE  240 (361)
Q Consensus       162 a~l~~~~~ta~~~l~~~~~~~~g~~vlV~Ga-g~vG~~a~~la~~~g~~vi~~~~~~~~~~~~~~~~g~~~vv~~~~~~~  240 (361)
                      +.+||+..+.+..++...---.|++|+|+|- ..+|.=.+.++...|++|++..+....                     
T Consensus       145 ~~~PcTp~avi~lL~~~~i~l~Gk~vvVIGRS~iVGkPla~lL~~~~ATVtvchs~T~n---------------------  203 (299)
T PLN02516        145 LFLPCTPKGCLELLSRSGIPIKGKKAVVVGRSNIVGLPVSLLLLKADATVTVVHSRTPD---------------------  203 (299)
T ss_pred             CCCCCCHHHHHHHHHHhCCCCCCCEEEEECCCccchHHHHHHHHHCCCEEEEeCCCCCC---------------------
Confidence            4567777777888877764457999999996 789999999999999999887654322                     


Q ss_pred             HHHhcCCccEEEEcCCCcccHHHHHhccccCCEEEEecCC
Q 018067          241 MQAAMGTMDGIIDTVSAVHPLMPLIGLLKSQGKLVLVGAP  280 (361)
Q Consensus       241 ~~~~~~g~d~vid~~g~~~~~~~~~~~l~~~G~~v~~g~~  280 (361)
                      +.+....+|+++-++|.+..+  -.+.+++|..++.+|..
T Consensus       204 l~~~~~~ADIvv~AvGk~~~i--~~~~vk~gavVIDvGin  241 (299)
T PLN02516        204 PESIVREADIVIAAAGQAMMI--KGDWIKPGAAVIDVGTN  241 (299)
T ss_pred             HHHHHhhCCEEEEcCCCcCcc--CHHHcCCCCEEEEeecc
Confidence            223344689999999987633  35788999999999964

>PRK06113 7-alpha-hydroxysteroid dehydrogenase; Validated

Probab=95.81  E-value=0.058  Score=47.83  Aligned_cols=75  Identities=17%  Similarity=0.314  Sum_probs=53.2

Q ss_pred             CCCEEEEEcC-ChHHHHHHHHHHHcCCeEEEEeCCchhHHHHHHH---cCCCE---EecCCCHHHHHHh-------cCCc
Q 018067          183 PGMHVGVVGL-GGLGHVAVKFAKAMGVKVTVISTSPSKKSEAIER---LGADS---FLVSRDQDEMQAA-------MGTM  248 (361)
Q Consensus       183 ~g~~vlV~Ga-g~vG~~a~~la~~~g~~vi~~~~~~~~~~~~~~~---~g~~~---vv~~~~~~~~~~~-------~~g~  248 (361)
                      .++++||.|+ |.+|..++..+...|+++++++++.++...+.++   .+.+.   ..|..+.+.+.++       .+++
T Consensus        10 ~~k~vlVtG~s~gIG~~la~~l~~~G~~vv~~~r~~~~~~~~~~~l~~~~~~~~~~~~D~~~~~~i~~~~~~~~~~~~~~   89 (255)
T PRK06113         10 DGKCAIITGAGAGIGKEIAITFATAGASVVVSDINADAANHVVDEIQQLGGQAFACRCDITSEQELSALADFALSKLGKV   89 (255)
T ss_pred             CCCEEEEECCCchHHHHHHHHHHHCCCeEEEEeCCHHHHHHHHHHHHhcCCcEEEEEccCCCHHHHHHHHHHHHHHcCCC
Confidence            4789999997 9999999999999999999998887665544333   23221   2355555433322       2478


Q ss_pred             cEEEEcCCC
Q 018067          249 DGIIDTVSA  257 (361)
Q Consensus       249 d~vid~~g~  257 (361)
                      |++|.++|.
T Consensus        90 d~li~~ag~   98 (255)
T PRK06113         90 DILVNNAGG   98 (255)
T ss_pred             CEEEECCCC
Confidence            999999884

>PRK05562 precorrin-2 dehydrogenase; Provisional

Probab=95.81  E-value=0.12  Score=44.75  Aligned_cols=115  Identities=14%  Similarity=-0.004  Sum_probs=68.2

Q ss_pred             CCCEEEEEcCChHHHHHHHHHHHcCCeEEEEeCCch-hHHHHHHHcCCCEEecCCCHHHHHHhcCCccEEEEcCCCcccH
Q 018067          183 PGMHVGVVGLGGLGHVAVKFAKAMGVKVTVISTSPS-KKSEAIERLGADSFLVSRDQDEMQAAMGTMDGIIDTVSAVHPL  261 (361)
Q Consensus       183 ~g~~vlV~Gag~vG~~a~~la~~~g~~vi~~~~~~~-~~~~~~~~~g~~~vv~~~~~~~~~~~~~g~d~vid~~g~~~~~  261 (361)
                      ++.+|||+|+|.++.-=+..+...|++|++++..-. ....+. +.|.-..+ .+..+  .....++++||-+++... +
T Consensus        24 ~~~~VLVVGGG~VA~RK~~~Ll~~gA~VtVVap~i~~el~~l~-~~~~i~~~-~r~~~--~~dl~g~~LViaATdD~~-v   98 (223)
T PRK05562         24 NKIKVLIIGGGKAAFIKGKTFLKKGCYVYILSKKFSKEFLDLK-KYGNLKLI-KGNYD--KEFIKDKHLIVIATDDEK-L   98 (223)
T ss_pred             CCCEEEEECCCHHHHHHHHHHHhCCCEEEEEcCCCCHHHHHHH-hCCCEEEE-eCCCC--hHHhCCCcEEEECCCCHH-H
Confidence            578999999999999988888889999988875432 333332 22321221 11111  112258999999999888 5


Q ss_pred             HHHHh-ccccCCEEEEecCCCCCcccChHH-HHhCCcEEEecc
Q 018067          262 MPLIG-LLKSQGKLVLVGAPEKPLELPAFS-LLMGRKIVGGSM  302 (361)
Q Consensus       262 ~~~~~-~l~~~G~~v~~g~~~~~~~~~~~~-~~~~~~~i~g~~  302 (361)
                      +..+. ..+..+.++.....+....|.... +-...++|.=|.
T Consensus        99 N~~I~~~a~~~~~lvn~vd~p~~~dFi~PAiv~rg~l~IaIST  141 (223)
T PRK05562         99 NNKIRKHCDRLYKLYIDCSDYKKGLCIIPYQRSTKNFVFALNT  141 (223)
T ss_pred             HHHHHHHHHHcCCeEEEcCCcccCeEEeeeEEecCCEEEEEEC
Confidence            55444 445557777665433322222222 223446664443

>PRK14166 bifunctional 5,10-methylene-tetrahydrofolate dehydrogenase/ 5,10-methylene-tetrahydrofolate cyclohydrolase; Provisional

Probab=95.81  E-value=0.082  Score=47.40  Aligned_cols=96  Identities=22%  Similarity=0.257  Sum_probs=74.2

Q ss_pred             cccchhhhhhhhHhhhcCCCCCCCEEEEEcC-ChHHHHHHHHHHHcCCeEEEEeCCchhHHHHHHHcCCCEEecCCCHHH
Q 018067          162 APLLCAGITVYSPLRFYGLDKPGMHVGVVGL-GGLGHVAVKFAKAMGVKVTVISTSPSKKSEAIERLGADSFLVSRDQDE  240 (361)
Q Consensus       162 a~l~~~~~ta~~~l~~~~~~~~g~~vlV~Ga-g~vG~~a~~la~~~g~~vi~~~~~~~~~~~~~~~~g~~~vv~~~~~~~  240 (361)
                      ..+||+..+.+..++...---.|++|+|+|- ..+|.=.+.++...+++|++..+....                     
T Consensus       135 ~~~PcTp~avi~lL~~y~i~l~Gk~vvVvGrS~iVGkPla~lL~~~~atVt~chs~T~n---------------------  193 (282)
T PRK14166        135 GFLPCTPLGVMKLLKAYEIDLEGKDAVIIGASNIVGRPMATMLLNAGATVSVCHIKTKD---------------------  193 (282)
T ss_pred             CCcCCCHHHHHHHHHHhCCCCCCCEEEEECCCCcchHHHHHHHHHCCCEEEEeCCCCCC---------------------
Confidence            3567777777887877764468999999996 789999999999999999876654322                     


Q ss_pred             HHHhcCCccEEEEcCCCcccHHHHHhccccCCEEEEecCC
Q 018067          241 MQAAMGTMDGIIDTVSAVHPLMPLIGLLKSQGKLVLVGAP  280 (361)
Q Consensus       241 ~~~~~~g~d~vid~~g~~~~~~~~~~~l~~~G~~v~~g~~  280 (361)
                      +.+.+..+|+++-++|.+..+  --+.+++|..++.+|..
T Consensus       194 l~~~~~~ADIvIsAvGkp~~i--~~~~vk~GavVIDvGin  231 (282)
T PRK14166        194 LSLYTRQADLIIVAAGCVNLL--RSDMVKEGVIVVDVGIN  231 (282)
T ss_pred             HHHHHhhCCEEEEcCCCcCcc--CHHHcCCCCEEEEeccc
Confidence            233344689999999998843  35688999999999964

>PRK07889 enoyl-(acyl carrier protein) reductase; Provisional

Probab=95.80  E-value=0.078  Score=47.17  Aligned_cols=75  Identities=15%  Similarity=0.294  Sum_probs=51.4

Q ss_pred             CCCEEEEEcC---ChHHHHHHHHHHHcCCeEEEEeCCc--hhHHHHHHHcCCC---EEecCCCHHHHHHh-------cCC
Q 018067          183 PGMHVGVVGL---GGLGHVAVKFAKAMGVKVTVISTSP--SKKSEAIERLGAD---SFLVSRDQDEMQAA-------MGT  247 (361)
Q Consensus       183 ~g~~vlV~Ga---g~vG~~a~~la~~~g~~vi~~~~~~--~~~~~~~~~~g~~---~vv~~~~~~~~~~~-------~~g  247 (361)
                      .+++++|.|+   +++|.++++.+...|++|++++++.  +....+.++++..   ...|..+++.+..+       .++
T Consensus         6 ~~k~~lItGa~~s~GIG~a~a~~la~~G~~v~l~~r~~~~~~~~~~~~~~~~~~~~~~~Dv~~~~~i~~~~~~~~~~~g~   85 (256)
T PRK07889          6 EGKRILVTGVITDSSIAFHVARVAQEQGAEVVLTGFGRALRLTERIAKRLPEPAPVLELDVTNEEHLASLADRVREHVDG   85 (256)
T ss_pred             cCCEEEEeCCCCcchHHHHHHHHHHHCCCEEEEecCccchhHHHHHHHhcCCCCcEEeCCCCCHHHHHHHHHHHHHHcCC
Confidence            4678999985   7999999999989999999988654  3344555555432   22344554433322       247


Q ss_pred             ccEEEEcCCC
Q 018067          248 MDGIIDTVSA  257 (361)
Q Consensus       248 ~d~vid~~g~  257 (361)
                      +|++|+++|.
T Consensus        86 iD~li~nAG~   95 (256)
T PRK07889         86 LDGVVHSIGF   95 (256)
T ss_pred             CcEEEEcccc
Confidence            9999999875

>COG2226 UbiE Methylase involved in ubiquinone/menaquinone biosynthesis [Coenzyme metabolism]

Probab=95.79  E-value=0.13  Score=44.98  Aligned_cols=100  Identities=25%  Similarity=0.322  Sum_probs=69.1

Q ss_pred             CCCCCEEEEEcCChHHHHHHHHHHHcCC-eEEEEeCCchhHHHHHHHcCC---CE-EecCCCHHHHHHhcCCccEEEEcC
Q 018067          181 DKPGMHVGVVGLGGLGHVAVKFAKAMGV-KVTVISTSPSKKSEAIERLGA---DS-FLVSRDQDEMQAAMGTMDGIIDTV  255 (361)
Q Consensus       181 ~~~g~~vlV~Gag~vG~~a~~la~~~g~-~vi~~~~~~~~~~~~~~~~g~---~~-vv~~~~~~~~~~~~~g~d~vid~~  255 (361)
                      .++|++||=+|+| +|-.+..+++..|- +|++++-++..+....++..-   .. -+...+.+.+.--...||+|.-+.
T Consensus        49 ~~~g~~vLDva~G-TGd~a~~~~k~~g~g~v~~~D~s~~ML~~a~~k~~~~~~~~i~fv~~dAe~LPf~D~sFD~vt~~f  127 (238)
T COG2226          49 IKPGDKVLDVACG-TGDMALLLAKSVGTGEVVGLDISESMLEVAREKLKKKGVQNVEFVVGDAENLPFPDNSFDAVTISF  127 (238)
T ss_pred             CCCCCEEEEecCC-ccHHHHHHHHhcCCceEEEEECCHHHHHHHHHHhhccCccceEEEEechhhCCCCCCccCEEEeee
Confidence            4689999988776 48999999998875 999999998876666444431   11 112233333332223688887666


Q ss_pred             CC------cccHHHHHhccccCCEEEEecCCC
Q 018067          256 SA------VHPLMPLIGLLKSQGKLVLVGAPE  281 (361)
Q Consensus       256 g~------~~~~~~~~~~l~~~G~~v~~g~~~  281 (361)
                      |-      +.++..+.+.|+|+|+++.+....
T Consensus       128 glrnv~d~~~aL~E~~RVlKpgG~~~vle~~~  159 (238)
T COG2226         128 GLRNVTDIDKALKEMYRVLKPGGRLLVLEFSK  159 (238)
T ss_pred             hhhcCCCHHHHHHHHHHhhcCCeEEEEEEcCC
Confidence            53      346888999999999999987654

>PLN02986 cinnamyl-alcohol dehydrogenase family protein

Probab=95.79  E-value=0.053  Score=49.94  Aligned_cols=75  Identities=20%  Similarity=0.214  Sum_probs=51.3

Q ss_pred             CCCEEEEEcC-ChHHHHHHHHHHHcCCeEEEEeCCchhHHHHHHH---cCC--C-EE--ecCCCHHHHHHhcCCccEEEE
Q 018067          183 PGMHVGVVGL-GGLGHVAVKFAKAMGVKVTVISTSPSKKSEAIER---LGA--D-SF--LVSRDQDEMQAAMGTMDGIID  253 (361)
Q Consensus       183 ~g~~vlV~Ga-g~vG~~a~~la~~~g~~vi~~~~~~~~~~~~~~~---~g~--~-~v--v~~~~~~~~~~~~~g~d~vid  253 (361)
                      .|++|||.|+ |.+|...+..+...|.+|+++.++.++...+.+.   .+.  . .+  .|..+++.+..+..++|+||.
T Consensus         4 ~~~~vlVTGatG~iG~~l~~~L~~~g~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~~Dl~~~~~~~~~~~~~d~vih   83 (322)
T PLN02986          4 GGKLVCVTGASGYIASWIVKLLLLRGYTVKATVRDLTDRKKTEHLLALDGAKERLKLFKADLLEESSFEQAIEGCDAVFH   83 (322)
T ss_pred             CCCEEEEECCCcHHHHHHHHHHHHCCCEEEEEECCCcchHHHHHHHhccCCCCceEEEecCCCCcchHHHHHhCCCEEEE
Confidence            5789999997 9999999999888999999888876543222111   111  1 11  233444555566668999999


Q ss_pred             cCCC
Q 018067          254 TVSA  257 (361)
Q Consensus       254 ~~g~  257 (361)
                      +++.
T Consensus        84 ~A~~   87 (322)
T PLN02986         84 TASP   87 (322)
T ss_pred             eCCC
Confidence            9873

>PRK07791 short chain dehydrogenase; Provisional

Probab=95.78  E-value=0.08  Score=47.98  Aligned_cols=76  Identities=24%  Similarity=0.306  Sum_probs=51.6

Q ss_pred             CCCCEEEEEcC-ChHHHHHHHHHHHcCCeEEEEeCCc---------hhHHHHHHHc---CCCE---EecCCCHHHHHH--
Q 018067          182 KPGMHVGVVGL-GGLGHVAVKFAKAMGVKVTVISTSP---------SKKSEAIERL---GADS---FLVSRDQDEMQA--  243 (361)
Q Consensus       182 ~~g~~vlV~Ga-g~vG~~a~~la~~~g~~vi~~~~~~---------~~~~~~~~~~---g~~~---vv~~~~~~~~~~--  243 (361)
                      -+++++||.|+ +++|..+++.+...|++|+++++..         ++...+.+++   +...   ..|-.+++.+..  
T Consensus         4 l~~k~~lITGas~GIG~aia~~la~~G~~vii~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~Dv~~~~~v~~~~   83 (286)
T PRK07791          4 LDGRVVIVTGAGGGIGRAHALAFAAEGARVVVNDIGVGLDGSASGGSAAQAVVDEIVAAGGEAVANGDDIADWDGAANLV   83 (286)
T ss_pred             cCCCEEEEECCCchHHHHHHHHHHHCCCEEEEeeCCccccccccchhHHHHHHHHHHhcCCceEEEeCCCCCHHHHHHHH
Confidence            35789999997 9999999999989999999887654         4444443333   3321   124455443332  


Q ss_pred             --h---cCCccEEEEcCCC
Q 018067          244 --A---MGTMDGIIDTVSA  257 (361)
Q Consensus       244 --~---~~g~d~vid~~g~  257 (361)
                        +   .+.+|++|+++|.
T Consensus        84 ~~~~~~~g~id~lv~nAG~  102 (286)
T PRK07791         84 DAAVETFGGLDVLVNNAGI  102 (286)
T ss_pred             HHHHHhcCCCCEEEECCCC
Confidence              2   2479999999885

>PRK14187 bifunctional 5,10-methylene-tetrahydrofolate dehydrogenase/ 5,10-methylene-tetrahydrofolate cyclohydrolase; Provisional

Probab=95.77  E-value=0.086  Score=47.54  Aligned_cols=96  Identities=13%  Similarity=0.110  Sum_probs=74.1

Q ss_pred             cccchhhhhhhhHhhhcCCCCCCCEEEEEcC-ChHHHHHHHHHHHcCCeEEEEeCCchhHHHHHHHcCCCEEecCCCHHH
Q 018067          162 APLLCAGITVYSPLRFYGLDKPGMHVGVVGL-GGLGHVAVKFAKAMGVKVTVISTSPSKKSEAIERLGADSFLVSRDQDE  240 (361)
Q Consensus       162 a~l~~~~~ta~~~l~~~~~~~~g~~vlV~Ga-g~vG~~a~~la~~~g~~vi~~~~~~~~~~~~~~~~g~~~vv~~~~~~~  240 (361)
                      ..+||+..+.+..++...---.|++|+|+|. ..+|.=.+.++...+++|++..+.....                    
T Consensus       138 ~~~PcTp~avi~lL~~~~i~l~Gk~vvViGrS~iVGkPla~lL~~~~aTVt~chs~T~~l--------------------  197 (294)
T PRK14187        138 CLIPCTPKGCLYLIKTITRNLSGSDAVVIGRSNIVGKPMACLLLGENCTVTTVHSATRDL--------------------  197 (294)
T ss_pred             CccCcCHHHHHHHHHHhCCCCCCCEEEEECCCccchHHHHHHHhhCCCEEEEeCCCCCCH--------------------
Confidence            3467777777777877764468999999996 8899999999999999998776543222                    


Q ss_pred             HHHhcCCccEEEEcCCCcccHHHHHhccccCCEEEEecCC
Q 018067          241 MQAAMGTMDGIIDTVSAVHPLMPLIGLLKSQGKLVLVGAP  280 (361)
Q Consensus       241 ~~~~~~g~d~vid~~g~~~~~~~~~~~l~~~G~~v~~g~~  280 (361)
                       .+.+..+|+++-++|.+..  --.+.+++|..++.+|..
T Consensus       198 -~~~~~~ADIvVsAvGkp~~--i~~~~ik~gaiVIDVGin  234 (294)
T PRK14187        198 -ADYCSKADILVAAVGIPNF--VKYSWIKKGAIVIDVGIN  234 (294)
T ss_pred             -HHHHhhCCEEEEccCCcCc--cCHHHcCCCCEEEEeccc
Confidence             2334468999999999873  345678999999999864

>TIGR01289 LPOR light-dependent protochlorophyllide reductase

Probab=95.77  E-value=0.055  Score=49.83  Aligned_cols=74  Identities=23%  Similarity=0.245  Sum_probs=53.3

Q ss_pred             CCEEEEEcC-ChHHHHHHHHHHHcC-CeEEEEeCCchhHHHHHHHcCC---C-E--EecCCCHHHHHH----h---cCCc
Q 018067          184 GMHVGVVGL-GGLGHVAVKFAKAMG-VKVTVISTSPSKKSEAIERLGA---D-S--FLVSRDQDEMQA----A---MGTM  248 (361)
Q Consensus       184 g~~vlV~Ga-g~vG~~a~~la~~~g-~~vi~~~~~~~~~~~~~~~~g~---~-~--vv~~~~~~~~~~----~---~~g~  248 (361)
                      +++++|.|+ +++|..++..+...| ++|++++++.++..++.++++.   . .  ..|..+.+.+..    +   .+++
T Consensus         3 ~k~vlITGas~GIG~aia~~L~~~G~~~V~l~~r~~~~~~~~~~~l~~~~~~~~~~~~Dl~~~~~v~~~~~~~~~~~~~i   82 (314)
T TIGR01289         3 KPTVIITGASSGLGLYAAKALAATGEWHVIMACRDFLKAEQAAKSLGMPKDSYTIMHLDLGSLDSVRQFVQQFRESGRPL   82 (314)
T ss_pred             CCEEEEECCCChHHHHHHHHHHHcCCCEEEEEeCCHHHHHHHHHHhcCCCCeEEEEEcCCCCHHHHHHHHHHHHHhCCCC
Confidence            568999998 999999999888899 8999999988776666665542   1 1  135555443332    2   2469


Q ss_pred             cEEEEcCCC
Q 018067          249 DGIIDTVSA  257 (361)
Q Consensus       249 d~vid~~g~  257 (361)
                      |++|+++|.
T Consensus        83 D~lI~nAG~   91 (314)
T TIGR01289        83 DALVCNAAV   91 (314)
T ss_pred             CEEEECCCc
Confidence            999999874

This model represents the light-dependent, NADPH-dependent form of protochlorophyllide reductase. It belongs to the short chain alcohol dehydrogenase family, in contrast to the nitrogenase-related light-independent form.

>PRK07775 short chain dehydrogenase; Provisional

Probab=95.76  E-value=0.079  Score=47.63  Aligned_cols=75  Identities=19%  Similarity=0.284  Sum_probs=51.5

Q ss_pred             CCCEEEEEcC-ChHHHHHHHHHHHcCCeEEEEeCCchhHHHHHHH---cCCCEE---ecCCCHHHHHHh-------cCCc
Q 018067          183 PGMHVGVVGL-GGLGHVAVKFAKAMGVKVTVISTSPSKKSEAIER---LGADSF---LVSRDQDEMQAA-------MGTM  248 (361)
Q Consensus       183 ~g~~vlV~Ga-g~vG~~a~~la~~~g~~vi~~~~~~~~~~~~~~~---~g~~~v---v~~~~~~~~~~~-------~~g~  248 (361)
                      +..+++|.|+ |.+|..+++.+...|++|++++++.++...+.+.   .+....   .|..+.+.+.++       .+++
T Consensus         9 ~~~~vlVtGa~g~iG~~la~~L~~~G~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~Dl~~~~~~~~~~~~~~~~~~~i   88 (274)
T PRK07775          9 DRRPALVAGASSGIGAATAIELAAAGFPVALGARRVEKCEELVDKIRADGGEAVAFPLDVTDPDSVKSFVAQAEEALGEI   88 (274)
T ss_pred             CCCEEEEECCCchHHHHHHHHHHHCCCEEEEEeCCHHHHHHHHHHHHhcCCeEEEEECCCCCHHHHHHHHHHHHHhcCCC
Confidence            4468999997 9999999999988999999988876654444322   233221   244554443322       2478


Q ss_pred             cEEEEcCCC
Q 018067          249 DGIIDTVSA  257 (361)
Q Consensus       249 d~vid~~g~  257 (361)
                      |++|.++|.
T Consensus        89 d~vi~~Ag~   97 (274)
T PRK07775         89 EVLVSGAGD   97 (274)
T ss_pred             CEEEECCCc
Confidence            999999975

>PRK05565 fabG 3-ketoacyl-(acyl-carrier-protein) reductase; Provisional

Probab=95.76  E-value=0.051  Score=47.69  Aligned_cols=74  Identities=20%  Similarity=0.406  Sum_probs=50.6

Q ss_pred             CCEEEEEcC-ChHHHHHHHHHHHcCCeEEEE-eCCchhHHHHHHHc---CCCE---EecCCCHHHHHHhc-------CCc
Q 018067          184 GMHVGVVGL-GGLGHVAVKFAKAMGVKVTVI-STSPSKKSEAIERL---GADS---FLVSRDQDEMQAAM-------GTM  248 (361)
Q Consensus       184 g~~vlV~Ga-g~vG~~a~~la~~~g~~vi~~-~~~~~~~~~~~~~~---g~~~---vv~~~~~~~~~~~~-------~g~  248 (361)
                      ++++||.|+ |.+|...+..+...|++|+++ .++.++...+.+.+   +...   ..|..+++.+.+..       +++
T Consensus         5 ~~~ilI~Gasg~iG~~la~~l~~~g~~v~~~~~r~~~~~~~~~~~~~~~~~~~~~~~~D~~~~~~~~~~~~~~~~~~~~i   84 (247)
T PRK05565          5 GKVAIVTGASGGIGRAIAELLAKEGAKVVIAYDINEEAAQELLEEIKEEGGDAIAVKADVSSEEDVENLVEQIVEKFGKI   84 (247)
T ss_pred             CCEEEEeCCCcHHHHHHHHHHHHCCCEEEEEcCCCHHHHHHHHHHHHhcCCeEEEEECCCCCHHHHHHHHHHHHHHhCCC
Confidence            568999997 999999999888889999988 77766554443332   2221   22445554433322       379


Q ss_pred             cEEEEcCCC
Q 018067          249 DGIIDTVSA  257 (361)
Q Consensus       249 d~vid~~g~  257 (361)
                      |++|.++|.
T Consensus        85 d~vi~~ag~   93 (247)
T PRK05565         85 DILVNNAGI   93 (247)
T ss_pred             CEEEECCCc
Confidence            999999875

>TIGR00080 pimt protein-L-isoaspartate(D-aspartate) O-methyltransferase

Probab=95.76  E-value=0.084  Score=45.70  Aligned_cols=98  Identities=30%  Similarity=0.332  Sum_probs=61.7

Q ss_pred             CCCCCCCEEEEEcCChHHHHHHHHHHHcCC--eEEEEeCCchhHHHHH---HHcCCCEE-ecCCCHHHHHHhcCCccEEE
Q 018067          179 GLDKPGMHVGVVGLGGLGHVAVKFAKAMGV--KVTVISTSPSKKSEAI---ERLGADSF-LVSRDQDEMQAAMGTMDGII  252 (361)
Q Consensus       179 ~~~~~g~~vlV~Gag~vG~~a~~la~~~g~--~vi~~~~~~~~~~~~~---~~~g~~~v-v~~~~~~~~~~~~~g~d~vi  252 (361)
                      ..++++++||-+|+|. |..++.+++..+.  +|+.++.+++....+.   ++.|.+.+ +...+..........||+|+
T Consensus        73 l~~~~~~~VLDiG~Gs-G~~a~~la~~~~~~g~V~~vD~~~~~~~~A~~~~~~~g~~~v~~~~~d~~~~~~~~~~fD~Ii  151 (215)
T TIGR00080        73 LELKPGMKVLEIGTGS-GYQAAVLAEIVGRDGLVVSIERIPELAEKAERRLRKLGLDNVIVIVGDGTQGWEPLAPYDRIY  151 (215)
T ss_pred             hCCCCcCEEEEECCCc-cHHHHHHHHHhCCCCEEEEEeCCHHHHHHHHHHHHHCCCCCeEEEECCcccCCcccCCCCEEE
Confidence            4478999999999864 6677778877653  6888888876544332   33454321 11111111001124799987


Q ss_pred             EcCCCcccHHHHHhccccCCEEEEe
Q 018067          253 DTVSAVHPLMPLIGLLKSQGKLVLV  277 (361)
Q Consensus       253 d~~g~~~~~~~~~~~l~~~G~~v~~  277 (361)
                      -............+.|+++|+++..
T Consensus       152 ~~~~~~~~~~~~~~~L~~gG~lv~~  176 (215)
T TIGR00080       152 VTAAGPKIPEALIDQLKEGGILVMP  176 (215)
T ss_pred             EcCCcccccHHHHHhcCcCcEEEEE
Confidence            6555555567888999999998865

Among the prokaryotes, the gene name is pcm. Among eukaryotes, pimt.

>PLN02896 cinnamyl-alcohol dehydrogenase

Probab=95.76  E-value=0.073  Score=49.78  Aligned_cols=76  Identities=18%  Similarity=0.275  Sum_probs=54.3

Q ss_pred             CCCCEEEEEcC-ChHHHHHHHHHHHcCCeEEEEeCCchhHHHHHHHc--CCC-EE--ecCCCHHHHHHhcCCccEEEEcC
Q 018067          182 KPGMHVGVVGL-GGLGHVAVKFAKAMGVKVTVISTSPSKKSEAIERL--GAD-SF--LVSRDQDEMQAAMGTMDGIIDTV  255 (361)
Q Consensus       182 ~~g~~vlV~Ga-g~vG~~a~~la~~~g~~vi~~~~~~~~~~~~~~~~--g~~-~v--v~~~~~~~~~~~~~g~d~vid~~  255 (361)
                      ..+.+|||.|+ |.+|..+++.+...|.+|++++++.++...+...+  +.. .+  .|..+.+.+.++..++|+||.++
T Consensus         8 ~~~~~vLVtG~~GfIG~~l~~~L~~~G~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~Dl~~~~~~~~~~~~~d~Vih~A   87 (353)
T PLN02896          8 SATGTYCVTGATGYIGSWLVKLLLQRGYTVHATLRDPAKSLHLLSKWKEGDRLRLFRADLQEEGSFDEAVKGCDGVFHVA   87 (353)
T ss_pred             cCCCEEEEECCCcHHHHHHHHHHHHCCCEEEEEeCChHHHHHHHHhhccCCeEEEEECCCCCHHHHHHHHcCCCEEEECC
Confidence            46788999997 99999999999999999999888765544443332  111 11  24445555666666899999998


Q ss_pred             CC
Q 018067          256 SA  257 (361)
Q Consensus       256 g~  257 (361)
                      +.
T Consensus        88 ~~   89 (353)
T PLN02896         88 AS   89 (353)
T ss_pred             cc
Confidence            74

>KOG1210 consensus Predicted 3-ketosphinganine reductase [Secondary metabolites biosynthesis, transport and catabolism]

Probab=95.74  E-value=0.037  Score=49.75  Aligned_cols=77  Identities=26%  Similarity=0.256  Sum_probs=57.7

Q ss_pred             CCCCCEEEEEcC-ChHHHHHHHHHHHcCCeEEEEeCCchhHHHHHHHcCCC-EEe-------cCCCHH----HHHHh---
Q 018067          181 DKPGMHVGVVGL-GGLGHVAVKFAKAMGVKVTVISTSPSKKSEAIERLGAD-SFL-------VSRDQD----EMQAA---  244 (361)
Q Consensus       181 ~~~g~~vlV~Ga-g~vG~~a~~la~~~g~~vi~~~~~~~~~~~~~~~~g~~-~vv-------~~~~~~----~~~~~---  244 (361)
                      .++..+++|.|+ .++|++.+..++..|++|.++.++.++..++++.++.. .+.       |-.+-+    .++++   
T Consensus        30 ~k~~~hi~itggS~glgl~la~e~~~~ga~Vti~ar~~~kl~~a~~~l~l~~~~~~v~~~S~d~~~Y~~v~~~~~~l~~~  109 (331)
T KOG1210|consen   30 PKPRRHILITGGSSGLGLALALECKREGADVTITARSGKKLLEAKAELELLTQVEDVSYKSVDVIDYDSVSKVIEELRDL  109 (331)
T ss_pred             cCccceEEEecCcchhhHHHHHHHHHccCceEEEeccHHHHHHHHhhhhhhhccceeeEeccccccHHHHHHHHhhhhhc
Confidence            356688999876 99999999999999999999999999999998888742 111       111212    22222   


Q ss_pred             cCCccEEEEcCCC
Q 018067          245 MGTMDGIIDTVSA  257 (361)
Q Consensus       245 ~~g~d~vid~~g~  257 (361)
                      .+.+|..|.|+|.
T Consensus       110 ~~~~d~l~~cAG~  122 (331)
T KOG1210|consen  110 EGPIDNLFCCAGV  122 (331)
T ss_pred             cCCcceEEEecCc
Confidence            2479999999996

>KOG0725 consensus Reductases with broad range of substrate specificities [General function prediction only]

Probab=95.74  E-value=0.065  Score=48.15  Aligned_cols=77  Identities=19%  Similarity=0.298  Sum_probs=55.3

Q ss_pred             CCCCEEEEEcC-ChHHHHHHHHHHHcCCeEEEEeCCchhHHHHHHHcC---CC------EEecCCCHHHHHH--------
Q 018067          182 KPGMHVGVVGL-GGLGHVAVKFAKAMGVKVTVISTSPSKKSEAIERLG---AD------SFLVSRDQDEMQA--------  243 (361)
Q Consensus       182 ~~g~~vlV~Ga-g~vG~~a~~la~~~g~~vi~~~~~~~~~~~~~~~~g---~~------~vv~~~~~~~~~~--------  243 (361)
                      -.|+.+||.|+ .++|.+++..+-..|++|+++.++.++..+..+++.   ..      ...|..+++....        
T Consensus         6 l~gkvalVTG~s~GIG~aia~~la~~Ga~v~i~~r~~~~~~~~~~~~~~~~~~~~~~~~~~~Dv~~~~~~~~l~~~~~~~   85 (270)
T KOG0725|consen    6 LAGKVALVTGGSSGIGKAIALLLAKAGAKVVITGRSEERLEETAQELGGLGYTGGKVLAIVCDVSKEVDVEKLVEFAVEK   85 (270)
T ss_pred             CCCcEEEEECCCChHHHHHHHHHHHCCCEEEEEeCCHHHHHHHHHHHHhcCCCCCeeEEEECcCCCHHHHHHHHHHHHHH
Confidence            46888999987 999999999999999999999999988766655432   21      2233443332222        


Q ss_pred             hcCCccEEEEcCCCc
Q 018067          244 AMGTMDGIIDTVSAV  258 (361)
Q Consensus       244 ~~~g~d~vid~~g~~  258 (361)
                      ..++.|+.++++|..
T Consensus        86 ~~GkidiLvnnag~~  100 (270)
T KOG0725|consen   86 FFGKIDILVNNAGAL  100 (270)
T ss_pred             hCCCCCEEEEcCCcC
Confidence            235799999998863

>TIGR01532 E4PD_g-proteo D-erythrose-4-phosphate dehydrogenase

Probab=95.72  E-value=0.069  Score=49.18  Aligned_cols=94  Identities=17%  Similarity=0.248  Sum_probs=62.4

Q ss_pred             EEEEEcCChHHHHHHHHHHHcC----CeEEEEeCCchh--HHHHHHHcCC--------------------C--EEecCCC
Q 018067          186 HVGVVGLGGLGHVAVKFAKAMG----VKVTVISTSPSK--KSEAIERLGA--------------------D--SFLVSRD  237 (361)
Q Consensus       186 ~vlV~Gag~vG~~a~~la~~~g----~~vi~~~~~~~~--~~~~~~~~g~--------------------~--~vv~~~~  237 (361)
                      +|.|.|.|.||..+.+.+...+    ++|..+....+.  ...+. ++.-                    .  .++..++
T Consensus         1 ~IaInGfGrIGR~vlr~l~e~~~~~~~~vvaInd~~~~~~~ayll-~yDS~hg~~~~~v~~~~~~l~v~g~~i~v~~~~~   79 (325)
T TIGR01532         1 RVAINGFGRIGRNVLRALYESGERLGIEVVALNELADQASMAHLL-RYDTSHGRFPGEVKVDGDCLHVNGDCIRVLHSPT   79 (325)
T ss_pred             CEEEECCCHHHHHHHHHHHhcCCCCCeEEEEEecCCCHHHHHHHH-hhCccCCCCCCcEEEeCCEEEECCeEEEEEEcCC
Confidence            4789999999999999987653    677666543221  22221 1110                    0  1111223


Q ss_pred             HHHHHHhcCCccEEEEcCCCcccHHHHHhccccCCEEEEecCC
Q 018067          238 QDEMQAAMGTMDGIIDTVSAVHPLMPLIGLLKSQGKLVLVGAP  280 (361)
Q Consensus       238 ~~~~~~~~~g~d~vid~~g~~~~~~~~~~~l~~~G~~v~~g~~  280 (361)
                      ++.+.....++|+||+|+|.......+...++.|++.|.++.+
T Consensus        80 p~~~~w~~~gvDiVie~tG~~~s~e~a~~~l~aGa~~V~~SaP  122 (325)
T TIGR01532        80 PEALPWRALGVDLVLDCTGVYGNREQGERHIRAGAKRVLFSHP  122 (325)
T ss_pred             hhhccccccCCCEEEEccchhccHHHHHHHHHcCCeEEEecCC
Confidence            3333333358999999999988788889999999999998865

Accordingly, this model is very close to the corresponding models for GAPDH, and those sequences which hit above trusted here invariably hit between trusted and noise to the GAPDH model (TIGR01534). Similarly, it may be found that there are species outside of the gamma proteobacteria which synthesize pyridoxine and have more than one aparrent GAPDH gene of which one may have E4PD activity - this may necessitate a readjustment of these models. Alternatively, some of the GAPDH enzymes may prove to be bifunctional in certain species.

>cd05313 NAD_bind_2_Glu_DH NAD(P) binding domain of glutamate dehydrogenase, subgroup 2

Probab=95.72  E-value=0.23  Score=44.02  Aligned_cols=118  Identities=16%  Similarity=0.233  Sum_probs=72.8

Q ss_pred             HhhhcCCCCCCCEEEEEcCChHHHHHHHHHHHcCCeEEEEeCCc-----------hhH--------------HHHHHHc-
Q 018067          174 PLRFYGLDKPGMHVGVVGLGGLGHVAVKFAKAMGVKVTVISTSP-----------SKK--------------SEAIERL-  227 (361)
Q Consensus       174 ~l~~~~~~~~g~~vlV~Gag~vG~~a~~la~~~g~~vi~~~~~~-----------~~~--------------~~~~~~~-  227 (361)
                      +++....--+|.+|+|.|-|.+|+.+++++..+|++|+.+.++.           +..              ..+.+.+ 
T Consensus        28 ~~~~~~~~l~g~~vaIqGfGnVG~~~a~~L~e~GakvvaVsD~~G~i~~~~Gld~~~l~~l~~~~~~~~~~v~~~~~~~~  107 (254)
T cd05313          28 MLKDRNETLKGKRVAISGSGNVAQYAAEKLLELGAKVVTLSDSKGYVYDPDGFTGEKLAELKEIKEVRRGRVSEYAKKYG  107 (254)
T ss_pred             HHHhcCCCcCCCEEEEECCCHHHHHHHHHHHHCCCEEEEEECCCceEECCCCCCHHHHHHHHHHHHhcCCcHHHHhhcCC
Confidence            34444333468999999999999999999999999999776621           111              1111111 


Q ss_pred             CCCEEecCCC-------------------HHHHHHhc-CCccEEEEcCCCcccHHHHHhccccCCEEEEecCC--CCCcc
Q 018067          228 GADSFLVSRD-------------------QDEMQAAM-GTMDGIIDTVSAVHPLMPLIGLLKSQGKLVLVGAP--EKPLE  285 (361)
Q Consensus       228 g~~~vv~~~~-------------------~~~~~~~~-~g~d~vid~~g~~~~~~~~~~~l~~~G~~v~~g~~--~~~~~  285 (361)
                      +++ .++..+                   .+++..+. .++.+|++.+.++.+ ..+-+.|...|.++.....  .+.+.
T Consensus       108 ~a~-~~~~~~~~~~~~DIliPcAl~~~I~~~na~~i~~~~ak~I~EgAN~p~t-~~a~~~L~~rGI~vvPD~laNaGGVi  185 (254)
T cd05313         108 TAK-YFEGKKPWEVPCDIAFPCATQNEVDAEDAKLLVKNGCKYVAEGANMPCT-AEAIEVFRQAGVLFAPGKAANAGGVA  185 (254)
T ss_pred             CCE-EeCCcchhcCCCcEEEeccccccCCHHHHHHHHHcCCEEEEeCCCCCCC-HHHHHHHHHCCcEEECchhhcCCCee
Confidence            121 122111                   12333332 368899999988874 4788888888877765443  34455


Q ss_pred             cChHHHHh
Q 018067          286 LPAFSLLM  293 (361)
Q Consensus       286 ~~~~~~~~  293 (361)
                      .+.+++..
T Consensus       186 vs~~E~~q  193 (254)
T cd05313         186 VSGLEMSQ  193 (254)
T ss_pred             eeHHHhhc
Confidence            66666543

Amino acid dehydrogenase (DH) is a widely distributed family of enzymes that catalyzes the oxidative deamination of an amino acid to its keto acid and ammonia with concomitant reduction of NADP+. Glutamate DH is a multidomain enzyme that catalyzes the reaction from glutamate to 2-oxyoglutarate and ammonia in the presence of NAD or NADP. It is present in all organisms. Enzymes involved in ammonia asimilation are typically NADP+-dependent, while those involved in glutamate catabolism are generally NAD+-dependent. Amino acid DH-like NAD(P)-binding domains are members of the Rossmann fold superfamily and include glutamate, leucine, and phenylalanine DHs, methylene tetrahydrofolate DH, methylene-tetrahydromethanopterin DH, methylene-tetrahydropholate DH/cyclohydrolase, Shikimate DH-like proteins, malate oxidoreductases, and glutamyl tRNA reductase. Amino acid DHs catalyze the deamination of amino acids t

>TIGR01963 PHB_DH 3-hydroxybutyrate dehydrogenase

Probab=95.72  E-value=0.067  Score=47.23  Aligned_cols=74  Identities=22%  Similarity=0.285  Sum_probs=51.6

Q ss_pred             CCEEEEEcC-ChHHHHHHHHHHHcCCeEEEEeCCchhHHHHHHHc---CCC---EEecCCCHHHH-------HHhcCCcc
Q 018067          184 GMHVGVVGL-GGLGHVAVKFAKAMGVKVTVISTSPSKKSEAIERL---GAD---SFLVSRDQDEM-------QAAMGTMD  249 (361)
Q Consensus       184 g~~vlV~Ga-g~vG~~a~~la~~~g~~vi~~~~~~~~~~~~~~~~---g~~---~vv~~~~~~~~-------~~~~~g~d  249 (361)
                      +.++||.|+ |.+|...+..+...|++|++++++.++...+...+   +..   ...|..+.+.+       .+..++.|
T Consensus         1 ~~~vlItGa~g~lG~~l~~~l~~~g~~v~~~~r~~~~~~~~~~~~~~~~~~~~~~~~D~~~~~~~~~~~~~~~~~~~~~d   80 (255)
T TIGR01963         1 GKTALVTGAASGIGLAIALALAAAGANVVVNDLGEAGAEAAAKVATDAGGSVIYLVADVTKEDEIADMIAAAAAEFGGLD   80 (255)
T ss_pred             CCEEEEcCCcchHHHHHHHHHHHCCCEEEEEeCCHHHHHHHHHHHHhcCCceEEEECCCCCHHHHHHHHHHHHHhcCCCC
Confidence            357999997 99999999999889999999999877655554332   222   12355555422       22234789


Q ss_pred             EEEEcCCC
Q 018067          250 GIIDTVSA  257 (361)
Q Consensus       250 ~vid~~g~  257 (361)
                      ++|.+++.
T Consensus        81 ~vi~~a~~   88 (255)
T TIGR01963        81 ILVNNAGI   88 (255)
T ss_pred             EEEECCCC
Confidence            99998875

This model represents a subfamily of the short chain dehydrogenases. Characterized members so far as 3-hydroxybutyrate dehydrogenases and are found in species that accumulate ester polmers called polyhydroxyalkanoic acids (PHAs) under certain conditions. Several members of the family are from species not known to accumulate PHAs, including Oceanobacillus iheyensis and Bacillus subtilis. However, polymer formation is not required for there be a role for 3-hydroxybutyrate dehydrogenase; it may be members of this family have the same function in those species.

>PRK12384 sorbitol-6-phosphate dehydrogenase; Provisional

Probab=95.70  E-value=0.055  Score=48.04  Aligned_cols=74  Identities=16%  Similarity=0.173  Sum_probs=51.0

Q ss_pred             CCEEEEEcC-ChHHHHHHHHHHHcCCeEEEEeCCchhHHHHHHHc----C-CC-E--EecCCCHHHHHHh-------cCC
Q 018067          184 GMHVGVVGL-GGLGHVAVKFAKAMGVKVTVISTSPSKKSEAIERL----G-AD-S--FLVSRDQDEMQAA-------MGT  247 (361)
Q Consensus       184 g~~vlV~Ga-g~vG~~a~~la~~~g~~vi~~~~~~~~~~~~~~~~----g-~~-~--vv~~~~~~~~~~~-------~~g  247 (361)
                      ++++||.|+ |.+|...+..+...|++|++++++.++...+.+++    + .. .  ..|..+++.+..+       .++
T Consensus         2 ~k~ilItG~~~~IG~~la~~l~~~g~~vi~~~r~~~~~~~~~~~~~~~~~~~~~~~~~~D~~~~~~i~~~~~~~~~~~~~   81 (259)
T PRK12384          2 NQVAVVIGGGQTLGAFLCHGLAEEGYRVAVADINSEKAANVAQEINAEYGEGMAYGFGADATSEQSVLALSRGVDEIFGR   81 (259)
T ss_pred             CCEEEEECCCcHHHHHHHHHHHHCCCEEEEEECCHHHHHHHHHHHHHhcCCceeEEEEccCCCHHHHHHHHHHHHHHcCC
Confidence            468999997 99999999999999999999998876554443322    2 11 1  2244454433322       247


Q ss_pred             ccEEEEcCCC
Q 018067          248 MDGIIDTVSA  257 (361)
Q Consensus       248 ~d~vid~~g~  257 (361)
                      +|++|+++|.
T Consensus        82 id~vv~~ag~   91 (259)
T PRK12384         82 VDLLVYNAGI   91 (259)
T ss_pred             CCEEEECCCc
Confidence            8999999874

>PRK13656 trans-2-enoyl-CoA reductase; Provisional

Probab=95.69  E-value=0.27  Score=46.19  Aligned_cols=76  Identities=13%  Similarity=0.086  Sum_probs=48.8

Q ss_pred             CCCCEEEEEcC-ChHHHH--HHHHHHHcCCeEEEEeCCc---h------------hHHHHHHHcCCCE-E--ecCCCHHH
Q 018067          182 KPGMHVGVVGL-GGLGHV--AVKFAKAMGVKVTVISTSP---S------------KKSEAIERLGADS-F--LVSRDQDE  240 (361)
Q Consensus       182 ~~g~~vlV~Ga-g~vG~~--a~~la~~~g~~vi~~~~~~---~------------~~~~~~~~~g~~~-v--v~~~~~~~  240 (361)
                      ..|+++||.|+ +++|++  +++.+ ..|++++++....   +            .....+++.|... .  .|..+++.
T Consensus        39 ~ggK~aLVTGaSsGIGlA~~IA~al-~~GA~Vi~v~~~~~~~~~~~~tagwy~~~a~~~~a~~~G~~a~~i~~DVss~E~  117 (398)
T PRK13656         39 NGPKKVLVIGASSGYGLASRIAAAF-GAGADTLGVFFEKPGTEKKTGTAGWYNSAAFDKFAKAAGLYAKSINGDAFSDEI  117 (398)
T ss_pred             CCCCEEEEECCCchHhHHHHHHHHH-HcCCeEEEEecCcchhhhcccccccchHHHHHHHHHhcCCceEEEEcCCCCHHH
Confidence            45688999997 899999  56666 8899988887422   1            1233445666432 2  24444433


Q ss_pred             HH----Hh---cCCccEEEEcCCCc
Q 018067          241 MQ----AA---MGTMDGIIDTVSAV  258 (361)
Q Consensus       241 ~~----~~---~~g~d~vid~~g~~  258 (361)
                      +.    .+   .+++|+++++++.+
T Consensus       118 v~~lie~I~e~~G~IDiLVnSaA~~  142 (398)
T PRK13656        118 KQKVIELIKQDLGQVDLVVYSLASP  142 (398)
T ss_pred             HHHHHHHHHHhcCCCCEEEECCccC
Confidence            22    22   25799999999876

>smart00846 Gp_dh_N Glyceraldehyde 3-phosphate dehydrogenase, NAD binding domain

Probab=95.67  E-value=0.14  Score=41.53  Aligned_cols=97  Identities=21%  Similarity=0.334  Sum_probs=59.4

Q ss_pred             EEEEEcCChHHHHHHHHHHH-cCCeEEEEeCC--chhHHHHHH---HcCC---CE---------------EecCCCHHHH
Q 018067          186 HVGVVGLGGLGHVAVKFAKA-MGVKVTVISTS--PSKKSEAIE---RLGA---DS---------------FLVSRDQDEM  241 (361)
Q Consensus       186 ~vlV~Gag~vG~~a~~la~~-~g~~vi~~~~~--~~~~~~~~~---~~g~---~~---------------vv~~~~~~~~  241 (361)
                      +|.|+|.|.+|...++.+.. .+.+++.+.+.  .+....+.+   ..|.   +.               ++..+++..+
T Consensus         2 kv~I~G~GriGr~v~~~~~~~~~~~lvai~d~~~~~~~a~ll~~Ds~hg~~~~~v~~~~~~l~i~g~~i~~~~~~~p~~~   81 (149)
T smart00846        2 KVGINGFGRIGRLVLRALLERPDIEVVAINDLTDPETLAHLLKYDSVHGRFPGEVEVDEDGLIVNGKKIKVLAERDPANL   81 (149)
T ss_pred             EEEEECcCHHHHHHHHHHHhCCCCEEEEeecCCCHHHHHHHhcccCCCCCCCCcEEEeCCEEEECCEEEEEEecCChHHC
Confidence            57899999999998888775 46677776652  222333322   1121   00               1111222333


Q ss_pred             HHhcCCccEEEEcCCCcccHHHHHhccccCCEEEEecCCCC
Q 018067          242 QAAMGTMDGIIDTVSAVHPLMPLIGLLKSQGKLVLVGAPEK  282 (361)
Q Consensus       242 ~~~~~g~d~vid~~g~~~~~~~~~~~l~~~G~~v~~g~~~~  282 (361)
                      .+..-|+|+|+||.|.-.+...+...++.|-+-|.++.+..
T Consensus        82 ~w~~~gvDiVie~tG~f~~~~~~~~hl~~GakkViisap~~  122 (149)
T smart00846       82 PWKELGVDIVVECTGKFTTREKASAHLKAGAKKVIISAPAK  122 (149)
T ss_pred             cccccCCeEEEeccccccchHHHHHHHHcCCCEEEeCCCCC
Confidence            33334899999999986556667778887877777776643

GAPDH is a tetrameric NAD-binding enzyme involved in glycolysis and glyconeogenesis. N-terminal domain is a Rossmann NAD(P) binding fold.

>KOG1014 consensus 17 beta-hydroxysteroid dehydrogenase type 3, HSD17B3 [Lipid transport and metabolism]

Probab=95.67  E-value=0.16  Score=45.77  Aligned_cols=76  Identities=18%  Similarity=0.243  Sum_probs=54.1

Q ss_pred             CCCCEEEEEcC-ChHHHHHHHHHHHcCCeEEEEeCCchhHHHHHHHcC----C---CEEecCCCHHH----HHHhcC--C
Q 018067          182 KPGMHVGVVGL-GGLGHVAVKFAKAMGVKVTVISTSPSKKSEAIERLG----A---DSFLVSRDQDE----MQAAMG--T  247 (361)
Q Consensus       182 ~~g~~vlV~Ga-g~vG~~a~~la~~~g~~vi~~~~~~~~~~~~~~~~g----~---~~vv~~~~~~~----~~~~~~--g  247 (361)
                      +-|++.+|.|+ .+||.+-+.-+-.+|.+|+.+.|+.+++...++++.    +   ..++|..+++.    +++...  .
T Consensus        47 ~~g~WAVVTGaTDGIGKayA~eLAkrG~nvvLIsRt~~KL~~v~kEI~~~~~vev~~i~~Dft~~~~~ye~i~~~l~~~~  126 (312)
T KOG1014|consen   47 KLGSWAVVTGATDGIGKAYARELAKRGFNVVLISRTQEKLEAVAKEIEEKYKVEVRIIAIDFTKGDEVYEKLLEKLAGLD  126 (312)
T ss_pred             hcCCEEEEECCCCcchHHHHHHHHHcCCEEEEEeCCHHHHHHHHHHHHHHhCcEEEEEEEecCCCchhHHHHHHHhcCCc
Confidence            45789999998 889976665555599999999999999887766553    2   24566666542    333222  4


Q ss_pred             ccEEEEcCCC
Q 018067          248 MDGIIDTVSA  257 (361)
Q Consensus       248 ~d~vid~~g~  257 (361)
                      +-+.+|++|.
T Consensus       127 VgILVNNvG~  136 (312)
T KOG1014|consen  127 VGILVNNVGM  136 (312)
T ss_pred             eEEEEecccc
Confidence            6667898885

>TIGR02371 ala_DH_arch alanine dehydrogenase, Archaeoglobus fulgidus type

Probab=95.67  E-value=0.093  Score=48.56  Aligned_cols=108  Identities=16%  Similarity=0.216  Sum_probs=71.2

Q ss_pred             hhcCCCCCCCEEEEEcCChHHHHHHHHHHH-cCC-eEEEEeCCchhHHHHHHHc---CCCEEecCCCHHHHHHhcCCccE
Q 018067          176 RFYGLDKPGMHVGVVGLGGLGHVAVKFAKA-MGV-KVTVISTSPSKKSEAIERL---GADSFLVSRDQDEMQAAMGTMDG  250 (361)
Q Consensus       176 ~~~~~~~~g~~vlV~Gag~vG~~a~~la~~-~g~-~vi~~~~~~~~~~~~~~~~---g~~~vv~~~~~~~~~~~~~g~d~  250 (361)
                      +..++ +...++.|+|+|..|.+.+..+.. ... +|.+.+++.++.+.+++++   |... ....+   .+++..+.|+
T Consensus       121 ~~La~-~~~~~lgiiG~G~qA~~~l~al~~~~~~~~v~V~~r~~~~~~~~~~~~~~~g~~v-~~~~~---~~eav~~aDi  195 (325)
T TIGR02371       121 KYLAR-KDSSVLGIIGAGRQAWTQLEALSRVFDLEEVSVYCRTPSTREKFALRASDYEVPV-RAATD---PREAVEGCDI  195 (325)
T ss_pred             HHhCC-CCCCEEEEECCCHHHHHHHHHHHhcCCCCEEEEECCCHHHHHHHHHHHHhhCCcE-EEeCC---HHHHhccCCE
Confidence            33443 567889999999999987666554 343 8888899988877766644   3221 11222   2344468999


Q ss_pred             EEEcCCCcccHHHHHhccccCCEEEEecCCCC-CcccChH
Q 018067          251 IIDTVSAVHPLMPLIGLLKSQGKLVLVGAPEK-PLELPAF  289 (361)
Q Consensus       251 vid~~g~~~~~~~~~~~l~~~G~~v~~g~~~~-~~~~~~~  289 (361)
                      |+-|+.+.. .....+.+++|-.+..+|.... ..+++..
T Consensus       196 VitaT~s~~-P~~~~~~l~~g~~v~~vGs~~p~~~Eld~~  234 (325)
T TIGR02371       196 LVTTTPSRK-PVVKADWVSEGTHINAIGADAPGKQELDPE  234 (325)
T ss_pred             EEEecCCCC-cEecHHHcCCCCEEEecCCCCcccccCCHH
Confidence            999887654 2233567899999999997543 3455543

This enzyme, a homolog of bacterial ornithine cyclodeaminases and marsupial mu-crystallins, is a homodimeric, NAD-dependent alanine dehydrogenase found in Archaeoglobus fulgidus and several other Archaea. For a number of close homologs, scoring between trusted and noise cutoffs, it is not clear at present what is the enzymatic activity.

>PRK07984 enoyl-(acyl carrier protein) reductase; Provisional

Probab=95.67  E-value=0.093  Score=46.91  Aligned_cols=75  Identities=15%  Similarity=0.240  Sum_probs=48.7

Q ss_pred             CCCEEEEEcCC---hHHHHHHHHHHHcCCeEEEEeCCc---hhHHHHHHHcCCC--EEecCCCHHHHHHh-------cCC
Q 018067          183 PGMHVGVVGLG---GLGHVAVKFAKAMGVKVTVISTSP---SKKSEAIERLGAD--SFLVSRDQDEMQAA-------MGT  247 (361)
Q Consensus       183 ~g~~vlV~Gag---~vG~~a~~la~~~g~~vi~~~~~~---~~~~~~~~~~g~~--~vv~~~~~~~~~~~-------~~g  247 (361)
                      .|+++||.|++   ++|.++++.+-..|++|+++.+++   +..+++..+.+..  ...|-.+++.+..+       .+.
T Consensus         5 ~~k~~lITGas~~~GIG~aia~~la~~G~~vil~~r~~~~~~~~~~~~~~~~~~~~~~~Dl~~~~~v~~~~~~~~~~~g~   84 (262)
T PRK07984          5 SGKRILVTGVASKLSIAYGIAQAMHREGAELAFTYQNDKLKGRVEEFAAQLGSDIVLPCDVAEDASIDAMFAELGKVWPK   84 (262)
T ss_pred             CCCEEEEeCCCCCccHHHHHHHHHHHCCCEEEEEecchhHHHHHHHHHhccCCceEeecCCCCHHHHHHHHHHHHhhcCC
Confidence            47889999973   799999999988999999887763   1222232222311  12355555443332       246


Q ss_pred             ccEEEEcCCC
Q 018067          248 MDGIIDTVSA  257 (361)
Q Consensus       248 ~d~vid~~g~  257 (361)
                      +|++|+++|.
T Consensus        85 iD~linnAg~   94 (262)
T PRK07984         85 FDGFVHSIGF   94 (262)
T ss_pred             CCEEEECCcc
Confidence            8999999973

>PRK14183 bifunctional 5,10-methylene-tetrahydrofolate dehydrogenase/ 5,10-methylene-tetrahydrofolate cyclohydrolase; Provisional

Probab=95.66  E-value=0.1  Score=46.77  Aligned_cols=96  Identities=19%  Similarity=0.208  Sum_probs=72.7

Q ss_pred             cccchhhhhhhhHhhhcCCCCCCCEEEEEcC-ChHHHHHHHHHHHcCCeEEEEeCCchhHHHHHHHcCCCEEecCCCHHH
Q 018067          162 APLLCAGITVYSPLRFYGLDKPGMHVGVVGL-GGLGHVAVKFAKAMGVKVTVISTSPSKKSEAIERLGADSFLVSRDQDE  240 (361)
Q Consensus       162 a~l~~~~~ta~~~l~~~~~~~~g~~vlV~Ga-g~vG~~a~~la~~~g~~vi~~~~~~~~~~~~~~~~g~~~vv~~~~~~~  240 (361)
                      ...||+..+....+++..---.|++|+|+|. ..+|.=.+.++...|++|++..+..+.                     
T Consensus       135 ~~~PcTp~avi~lL~~~~i~l~Gk~vvViGrS~~VG~Pla~lL~~~~AtVti~hs~T~~---------------------  193 (281)
T PRK14183        135 GFVPCTPLGVMELLEEYEIDVKGKDVCVVGASNIVGKPMAALLLNANATVDICHIFTKD---------------------  193 (281)
T ss_pred             CCCCCcHHHHHHHHHHcCCCCCCCEEEEECCCCcchHHHHHHHHHCCCEEEEeCCCCcC---------------------
Confidence            3567777777777777764468999999997 689999999999999999865433221                     


Q ss_pred             HHHhcCCccEEEEcCCCcccHHHHHhccccCCEEEEecCC
Q 018067          241 MQAAMGTMDGIIDTVSAVHPLMPLIGLLKSQGKLVLVGAP  280 (361)
Q Consensus       241 ~~~~~~g~d~vid~~g~~~~~~~~~~~l~~~G~~v~~g~~  280 (361)
                      +.+....+|+++-++|.+..  --.+.+++|..++.+|..
T Consensus       194 l~~~~~~ADIvV~AvGkp~~--i~~~~vk~gavvIDvGin  231 (281)
T PRK14183        194 LKAHTKKADIVIVGVGKPNL--ITEDMVKEGAIVIDIGIN  231 (281)
T ss_pred             HHHHHhhCCEEEEecCcccc--cCHHHcCCCcEEEEeecc
Confidence            12344568999999999873  346788999999999964

>PRK08300 acetaldehyde dehydrogenase; Validated

Probab=95.65  E-value=0.4  Score=43.54  Aligned_cols=169  Identities=13%  Similarity=0.097  Sum_probs=90.8

Q ss_pred             CEEEEEcCChHHHHHHH-HHHHcCCeEEEEeCCchh--HHHHHHHcCCCEEecCCCHHHHHHh--cCCccEEEEcCCCcc
Q 018067          185 MHVGVVGLGGLGHVAVK-FAKAMGVKVTVISTSPSK--KSEAIERLGADSFLVSRDQDEMQAA--MGTMDGIIDTVSAVH  259 (361)
Q Consensus       185 ~~vlV~Gag~vG~~a~~-la~~~g~~vi~~~~~~~~--~~~~~~~~g~~~vv~~~~~~~~~~~--~~g~d~vid~~g~~~  259 (361)
                      -+|.|+|.|.+|...+. +.+.-+.++..+++.+..  ....++++|....  +.+.+.+.+.  ...+|+||++++...
T Consensus         5 lrVAIIGtG~IGt~hm~~l~~~~~velvAVvdid~es~gla~A~~~Gi~~~--~~~ie~LL~~~~~~dIDiVf~AT~a~~   82 (302)
T PRK08300          5 LKVAIIGSGNIGTDLMIKILRSEHLEPGAMVGIDPESDGLARARRLGVATS--AEGIDGLLAMPEFDDIDIVFDATSAGA   82 (302)
T ss_pred             CeEEEEcCcHHHHHHHHHHhcCCCcEEEEEEeCChhhHHHHHHHHcCCCcc--cCCHHHHHhCcCCCCCCEEEECCCHHH
Confidence            46899999999987444 444446788877765442  2244577775432  2333333332  146999999999876


Q ss_pred             cHHHHHhccccCCEEEEecCCC-CC---cccChHHHHh-CCcEEEecccCCHHHHHHHHHHHHcCCCceeE---------
Q 018067          260 PLMPLIGLLKSQGKLVLVGAPE-KP---LELPAFSLLM-GRKIVGGSMIGGMKETQEMIDFAAKHNIRADI---------  325 (361)
Q Consensus       260 ~~~~~~~~l~~~G~~v~~g~~~-~~---~~~~~~~~~~-~~~~i~g~~~~~~~~~~~~~~ll~~~~~~~~~---------  325 (361)
                      -...+..+++.|-.++...... .+   ..++...+.. .+..+........-.+-.++.-+.++.+...+         
T Consensus        83 H~e~a~~a~eaGk~VID~sPA~~~PlvVP~VN~~~~~~~~~~~iia~p~~ati~~v~Al~~v~~~~~~eIvat~~s~s~g  162 (302)
T PRK08300         83 HVRHAAKLREAGIRAIDLTPAAIGPYCVPAVNLDEHLDAPNVNMVTCGGQATIPIVAAVSRVAPVHYAEIVASIASKSAG  162 (302)
T ss_pred             HHHHHHHHHHcCCeEEECCccccCCcccCcCCHHHHhcccCCCEEECccHHHHHHHHHhcccCcCceeeeeeeehhhccC
Confidence            4555555666666666553322 12   1344444432 34566665554333333333334444333222         


Q ss_pred             --EEEecccH----HHHHHHHHcCCCceEEEEEeCCc
Q 018067          326 --EVIPADYV----NTALERLAKADVRYRFVIDVANT  356 (361)
Q Consensus       326 --~~~~l~~~----~~a~~~~~~~~~~gkvvi~~~~~  356 (361)
                        ..--++|+    ..+++.+- |-.+||.+|-+++-
T Consensus       163 ~gtr~nidE~~~~t~~~~~~~~-g~~~~kai~~~npa  198 (302)
T PRK08300        163 PGTRANIDEFTETTSRAIEKVG-GAARGKAIIILNPA  198 (302)
T ss_pred             CcccccHHHHHHHHHHHHHHhc-CcccceEEEEecCC
Confidence              12224444    33444333 33468998888754

>PRK05650 short chain dehydrogenase; Provisional

Probab=95.65  E-value=0.063  Score=48.06  Aligned_cols=72  Identities=22%  Similarity=0.326  Sum_probs=50.0

Q ss_pred             EEEEEcC-ChHHHHHHHHHHHcCCeEEEEeCCchhHHHHHHHc---CCCE---EecCCCHHHHHHh-------cCCccEE
Q 018067          186 HVGVVGL-GGLGHVAVKFAKAMGVKVTVISTSPSKKSEAIERL---GADS---FLVSRDQDEMQAA-------MGTMDGI  251 (361)
Q Consensus       186 ~vlV~Ga-g~vG~~a~~la~~~g~~vi~~~~~~~~~~~~~~~~---g~~~---vv~~~~~~~~~~~-------~~g~d~v  251 (361)
                      +++|.|+ |.+|...+..+...|++|++++++.++...+.+.+   +.+.   ..|..+++.+..+       .+++|++
T Consensus         2 ~vlVtGasggIG~~la~~l~~~g~~V~~~~r~~~~~~~~~~~l~~~~~~~~~~~~D~~~~~~~~~~~~~i~~~~~~id~l   81 (270)
T PRK05650          2 RVMITGAASGLGRAIALRWAREGWRLALADVNEEGGEETLKLLREAGGDGFYQRCDVRDYSQLTALAQACEEKWGGIDVI   81 (270)
T ss_pred             EEEEecCCChHHHHHHHHHHHCCCEEEEEeCCHHHHHHHHHHHHhcCCceEEEEccCCCHHHHHHHHHHHHHHcCCCCEE
Confidence            6899997 99999999999889999999998877655443332   3222   1234444333222       2479999


Q ss_pred             EEcCCC
Q 018067          252 IDTVSA  257 (361)
Q Consensus       252 id~~g~  257 (361)
                      |+++|.
T Consensus        82 I~~ag~   87 (270)
T PRK05650         82 VNNAGV   87 (270)
T ss_pred             EECCCC
Confidence            999885

>PF03446 NAD_binding_2: NAD binding domain of 6-phosphogluconate dehydrogenase; InterPro: IPR006115 6-Phosphogluconate dehydrogenase (1

Probab=95.60  E-value=0.074  Score=43.88  Aligned_cols=89  Identities=22%  Similarity=0.329  Sum_probs=58.1

Q ss_pred             EEEEEcCChHHHHHHHHHHHcCCeEEEEeCCchhHHHHHHHcCCCEEecCCCHHHHHHhcCCccEEEEcCCCcccHHHH-
Q 018067          186 HVGVVGLGGLGHVAVKFAKAMGVKVTVISTSPSKKSEAIERLGADSFLVSRDQDEMQAAMGTMDGIIDTVSAVHPLMPL-  264 (361)
Q Consensus       186 ~vlV~Gag~vG~~a~~la~~~g~~vi~~~~~~~~~~~~~~~~g~~~vv~~~~~~~~~~~~~g~d~vid~~g~~~~~~~~-  264 (361)
                      +|-++|.|.+|...+.-+...|.+|++.++++++...+.+ .|+...  .+..+    +....|+||-++......... 
T Consensus         3 ~Ig~IGlG~mG~~~a~~L~~~g~~v~~~d~~~~~~~~~~~-~g~~~~--~s~~e----~~~~~dvvi~~v~~~~~v~~v~   75 (163)
T PF03446_consen    3 KIGFIGLGNMGSAMARNLAKAGYEVTVYDRSPEKAEALAE-AGAEVA--DSPAE----AAEQADVVILCVPDDDAVEAVL   75 (163)
T ss_dssp             EEEEE--SHHHHHHHHHHHHTTTEEEEEESSHHHHHHHHH-TTEEEE--SSHHH----HHHHBSEEEE-SSSHHHHHHHH
T ss_pred             EEEEEchHHHHHHHHHHHHhcCCeEEeeccchhhhhhhHH-hhhhhh--hhhhh----HhhcccceEeecccchhhhhhh
Confidence            6889999999999999999999999999999888877743 464322  22222    233469999998885434443 


Q ss_pred             -----HhccccCCEEEEecCCC
Q 018067          265 -----IGLLKSQGKLVLVGAPE  281 (361)
Q Consensus       265 -----~~~l~~~G~~v~~g~~~  281 (361)
                           +..++++..++.++..+
T Consensus        76 ~~~~i~~~l~~g~iiid~sT~~   97 (163)
T PF03446_consen   76 FGENILAGLRPGKIIIDMSTIS   97 (163)
T ss_dssp             HCTTHGGGS-TTEEEEE-SS--
T ss_pred             hhhHHhhccccceEEEecCCcc
Confidence                 44456677777776543

1.1.44 from EC) (6PGD) is an oxidative carboxylase that catalyses the decarboxylating reduction of 6-phosphogluconate into ribulose 5-phosphate in the presence of NADP. This reaction is a component of the hexose mono-phosphate shunt and pentose phosphate pathways (PPP) [, ]. Prokaryotic and eukaryotic 6PGD are proteins of about 470 amino acids whose sequence are highly conserved []. The protein is a homodimer in which the monomers act independently []: each contains a large, mainly alpha-helical domain and a smaller beta-alpha-beta domain, containing a mixed parallel and anti-parallel 6-stranded beta sheet []. NADP is bound in a cleft in the small domain, the substrate binding in an adjacent pocket []. This family represents the NADP binding domain of 6-phosphogluconate dehydrogenase which adopts a Rossman fold. The C-terminal domain is described in IPR006114 from INTERPRO.; GO: 0004616 phosphogluconate dehydrogenase (decarboxylating) activity, 0006098 pentose-phosphate shunt, 0055114 oxidation-reduction process; PDB: 3AX6_D 3PDU_G 3Q3C_A 3OBB_A 4DLL_B 1PGP_A 1PGN_A 2PGD_A 1PGQ_A 1PGO_A ....

>PRK00107 gidB 16S rRNA methyltransferase GidB; Reviewed

Probab=95.60  E-value=0.15  Score=43.02  Aligned_cols=96  Identities=23%  Similarity=0.257  Sum_probs=59.0

Q ss_pred             CCCCCEEEEEcCChHHHHHHHHHHH-cCCeEEEEeCCchhHHHH---HHHcCCCEE-ecCCCHHHHHHhcCCccEEEEcC
Q 018067          181 DKPGMHVGVVGLGGLGHVAVKFAKA-MGVKVTVISTSPSKKSEA---IERLGADSF-LVSRDQDEMQAAMGTMDGIIDTV  255 (361)
Q Consensus       181 ~~~g~~vlV~Gag~vG~~a~~la~~-~g~~vi~~~~~~~~~~~~---~~~~g~~~v-v~~~~~~~~~~~~~g~d~vid~~  255 (361)
                      ++++.+||-+|+|. |..++.+++. .+++|+.++.+++....+   .++.+.+.+ +...+...... .+.+|+|+-..
T Consensus        43 l~~g~~VLDiGcGt-G~~al~la~~~~~~~V~giD~s~~~l~~A~~~~~~~~l~~i~~~~~d~~~~~~-~~~fDlV~~~~  120 (187)
T PRK00107         43 LPGGERVLDVGSGA-GFPGIPLAIARPELKVTLVDSLGKKIAFLREVAAELGLKNVTVVHGRAEEFGQ-EEKFDVVTSRA  120 (187)
T ss_pred             cCCCCeEEEEcCCC-CHHHHHHHHHCCCCeEEEEeCcHHHHHHHHHHHHHcCCCCEEEEeccHhhCCC-CCCccEEEEcc
Confidence            45688999998754 5555555554 467999999887654333   234454321 11111111111 34799998643


Q ss_pred             CC--cccHHHHHhccccCCEEEEec
Q 018067          256 SA--VHPLMPLIGLLKSQGKLVLVG  278 (361)
Q Consensus       256 g~--~~~~~~~~~~l~~~G~~v~~g  278 (361)
                      ..  +..+..+.+.|+++|+++.+-
T Consensus       121 ~~~~~~~l~~~~~~LkpGG~lv~~~  145 (187)
T PRK00107        121 VASLSDLVELCLPLLKPGGRFLALK  145 (187)
T ss_pred             ccCHHHHHHHHHHhcCCCeEEEEEe
Confidence            32  244667889999999999883

>TIGR02622 CDP_4_6_dhtase CDP-glucose 4,6-dehydratase

Probab=95.60  E-value=0.066  Score=50.02  Aligned_cols=75  Identities=21%  Similarity=0.249  Sum_probs=51.7

Q ss_pred             CCCEEEEEcC-ChHHHHHHHHHHHcCCeEEEEeCCchhHHHHHHHcC----CC-EEecCCCHHHHHHhcC--CccEEEEc
Q 018067          183 PGMHVGVVGL-GGLGHVAVKFAKAMGVKVTVISTSPSKKSEAIERLG----AD-SFLVSRDQDEMQAAMG--TMDGIIDT  254 (361)
Q Consensus       183 ~g~~vlV~Ga-g~vG~~a~~la~~~g~~vi~~~~~~~~~~~~~~~~g----~~-~vv~~~~~~~~~~~~~--g~d~vid~  254 (361)
                      .|.+|||.|+ |.+|..+++.+...|.+|+++++.........+.++    .. ...|-.+.+.+..+..  ++|+||++
T Consensus         3 ~~k~ilItGatG~IG~~l~~~L~~~G~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~Dl~~~~~~~~~~~~~~~d~vih~   82 (349)
T TIGR02622         3 QGKKVLVTGHTGFKGSWLSLWLLELGAEVYGYSLDPPTSPNLFELLNLAKKIEDHFGDIRDAAKLRKAIAEFKPEIVFHL   82 (349)
T ss_pred             CCCEEEEECCCChhHHHHHHHHHHCCCEEEEEeCCCccchhHHHHHhhcCCceEEEccCCCHHHHHHHHhhcCCCEEEEC
Confidence            4678999997 999999999999999999999877654333222222    11 1224455555555433  58999999


Q ss_pred             CCC
Q 018067          255 VSA  257 (361)
Q Consensus       255 ~g~  257 (361)
                      ++.
T Consensus        83 A~~   85 (349)
T TIGR02622        83 AAQ   85 (349)
T ss_pred             Ccc
Confidence            974

Members of this protein family are CDP-glucose 4,6-dehydratase from a variety of Gram-negative and Gram-positive bacteria. Members typically are encoded next to a gene that encodes a glucose-1-phosphate cytidylyltransferase, which produces the substrate, CDP-D-glucose, used by this enzyme to produce CDP-4-keto-6-deoxyglucose.

>PRK14171 bifunctional 5,10-methylene-tetrahydrofolate dehydrogenase/ 5,10-methylene-tetrahydrofolate cyclohydrolase; Provisional

Probab=95.60  E-value=0.11  Score=46.71  Aligned_cols=95  Identities=13%  Similarity=0.229  Sum_probs=72.3

Q ss_pred             ccchhhhhhhhHhhhcCCCCCCCEEEEEcC-ChHHHHHHHHHHHcCCeEEEEeCCchhHHHHHHHcCCCEEecCCCHHHH
Q 018067          163 PLLCAGITVYSPLRFYGLDKPGMHVGVVGL-GGLGHVAVKFAKAMGVKVTVISTSPSKKSEAIERLGADSFLVSRDQDEM  241 (361)
Q Consensus       163 ~l~~~~~ta~~~l~~~~~~~~g~~vlV~Ga-g~vG~~a~~la~~~g~~vi~~~~~~~~~~~~~~~~g~~~vv~~~~~~~~  241 (361)
                      ..||+..+....++...---.|++|+|+|. ..+|.=.+.++...+++|++..+....                     +
T Consensus       138 ~~PcTp~av~~lL~~y~i~l~GK~vvViGrS~iVGkPla~lL~~~~ATVtichs~T~~---------------------L  196 (288)
T PRK14171        138 FIPCTALGCLAVIKKYEPNLTGKNVVIIGRSNIVGKPLSALLLKENCSVTICHSKTHN---------------------L  196 (288)
T ss_pred             CcCCCHHHHHHHHHHhCCCCCCCEEEEECCCCcchHHHHHHHHHCCCEEEEeCCCCCC---------------------H
Confidence            467777777777777664468999999996 889999999999999999876543322                     2


Q ss_pred             HHhcCCccEEEEcCCCcccHHHHHhccccCCEEEEecCC
Q 018067          242 QAAMGTMDGIIDTVSAVHPLMPLIGLLKSQGKLVLVGAP  280 (361)
Q Consensus       242 ~~~~~g~d~vid~~g~~~~~~~~~~~l~~~G~~v~~g~~  280 (361)
                      .+.+..+|+++-++|.+..+  --+.+++|..++.+|..
T Consensus       197 ~~~~~~ADIvV~AvGkp~~i--~~~~vk~GavVIDvGin  233 (288)
T PRK14171        197 SSITSKADIVVAAIGSPLKL--TAEYFNPESIVIDVGIN  233 (288)
T ss_pred             HHHHhhCCEEEEccCCCCcc--CHHHcCCCCEEEEeecc
Confidence            23344589999999987633  35788999999999964

>PRK13255 thiopurine S-methyltransferase; Reviewed

Probab=95.60  E-value=0.083  Score=45.85  Aligned_cols=95  Identities=19%  Similarity=0.135  Sum_probs=60.0

Q ss_pred             CCCCCEEEEEcCChHHHHHHHHHHHcCCeEEEEeCCchhHHHHHHHcCCCEEe---------cCCC-----HHHHH---H
Q 018067          181 DKPGMHVGVVGLGGLGHVAVKFAKAMGVKVTVISTSPSKKSEAIERLGADSFL---------VSRD-----QDEMQ---A  243 (361)
Q Consensus       181 ~~~g~~vlV~Gag~vG~~a~~la~~~g~~vi~~~~~~~~~~~~~~~~g~~~vv---------~~~~-----~~~~~---~  243 (361)
                      +.++.+||+.|+|. |.-++.+|. .|++|+.++-++...+.+.++.+.....         ...+     .|...   .
T Consensus        35 ~~~~~rvL~~gCG~-G~da~~LA~-~G~~V~avD~s~~Ai~~~~~~~~l~~~~~~~~~~~~~~~~~v~~~~~D~~~l~~~  112 (218)
T PRK13255         35 LPAGSRVLVPLCGK-SLDMLWLAE-QGHEVLGVELSELAVEQFFAENGLTPQTRQSGEFEHYQAGEITIYCGDFFALTAA  112 (218)
T ss_pred             CCCCCeEEEeCCCC-hHhHHHHHh-CCCeEEEEccCHHHHHHHHHHcCCCccccccccccccccCceEEEECcccCCCcc
Confidence            35678999999874 777777775 7999999999988777665544432110         0000     01100   0


Q ss_pred             hcCCccEEEEcCCC--------cccHHHHHhccccCCEEEEe
Q 018067          244 AMGTMDGIIDTVSA--------VHPLMPLIGLLKSQGKLVLV  277 (361)
Q Consensus       244 ~~~g~d~vid~~g~--------~~~~~~~~~~l~~~G~~v~~  277 (361)
                      ..+.+|.|+|...-        ...+....++|+++|+++.+
T Consensus       113 ~~~~fd~v~D~~~~~~l~~~~R~~~~~~l~~lL~pgG~~~l~  154 (218)
T PRK13255        113 DLADVDAVYDRAALIALPEEMRERYVQQLAALLPAGCRGLLV  154 (218)
T ss_pred             cCCCeeEEEehHhHhhCCHHHHHHHHHHHHHHcCCCCeEEEE
Confidence            11358999996632        22367788899999975553

>PRK12769 putative oxidoreductase Fe-S binding subunit; Reviewed

Probab=95.60  E-value=0.046  Score=55.72  Aligned_cols=77  Identities=21%  Similarity=0.324  Sum_probs=52.7

Q ss_pred             CCCCEEEEEcCChHHHHHHHHHHHcCCeEEEEeCCch--------------------hHHHHHHHcCCCEEecCCC--HH
Q 018067          182 KPGMHVGVVGLGGLGHVAVKFAKAMGVKVTVISTSPS--------------------KKSEAIERLGADSFLVSRD--QD  239 (361)
Q Consensus       182 ~~g~~vlV~Gag~vG~~a~~la~~~g~~vi~~~~~~~--------------------~~~~~~~~~g~~~vv~~~~--~~  239 (361)
                      ..+++|+|+|+|+.|++++..+...|.+|+++.+.+.                    +.....+++|++...+..-  .-
T Consensus       325 ~~~~~VaIIGaGpAGLsaA~~L~~~G~~V~V~E~~~~~GG~l~~gip~~~l~~~~~~~~~~~~~~~Gv~~~~~~~v~~~i  404 (654)
T PRK12769        325 KSDKRVAIIGAGPAGLACADVLARNGVAVTVYDRHPEIGGLLTFGIPAFKLDKSLLARRREIFSAMGIEFELNCEVGKDI  404 (654)
T ss_pred             cCCCEEEEECCCHHHHHHHHHHHHCCCeEEEEecCCCCCceeeecCCCccCCHHHHHHHHHHHHHCCeEEECCCEeCCcC
Confidence            3688999999999999999999999999999886532                    1223345677653322211  11


Q ss_pred             HHHHhcCCccEEEEcCCCc
Q 018067          240 EMQAAMGTMDGIIDTVSAV  258 (361)
Q Consensus       240 ~~~~~~~g~d~vid~~g~~  258 (361)
                      .+..+..++|.||.++|..
T Consensus       405 ~~~~~~~~~DavilAtGa~  423 (654)
T PRK12769        405 SLESLLEDYDAVFVGVGTY  423 (654)
T ss_pred             CHHHHHhcCCEEEEeCCCC
Confidence            1223335799999998864

>PRK08655 prephenate dehydrogenase; Provisional

Probab=95.59  E-value=0.093  Score=50.63  Aligned_cols=88  Identities=26%  Similarity=0.369  Sum_probs=57.7

Q ss_pred             EEEEEc-CChHHHHHHHHHHHcCCeEEEEeCCchhHHHHHHHcCCCEEecCCCHHHHHHhcCCccEEEEcCCCccc---H
Q 018067          186 HVGVVG-LGGLGHVAVKFAKAMGVKVTVISTSPSKKSEAIERLGADSFLVSRDQDEMQAAMGTMDGIIDTVSAVHP---L  261 (361)
Q Consensus       186 ~vlV~G-ag~vG~~a~~la~~~g~~vi~~~~~~~~~~~~~~~~g~~~vv~~~~~~~~~~~~~g~d~vid~~g~~~~---~  261 (361)
                      +|.|+| .|.+|.+.+..++..|.+|++++++.++....++++|+..   ..+   ..+....+|+||-|+.....   +
T Consensus         2 kI~IIGG~G~mG~slA~~L~~~G~~V~v~~r~~~~~~~~a~~~gv~~---~~~---~~e~~~~aDvVIlavp~~~~~~vl   75 (437)
T PRK08655          2 KISIIGGTGGLGKWFARFLKEKGFEVIVTGRDPKKGKEVAKELGVEY---AND---NIDAAKDADIVIISVPINVTEDVI   75 (437)
T ss_pred             EEEEEecCCHHHHHHHHHHHHCCCEEEEEECChHHHHHHHHHcCCee---ccC---HHHHhccCCEEEEecCHHHHHHHH
Confidence            588898 5999999999999999999999988776556666777531   111   11223457888777765431   2


Q ss_pred             HHHHhccccCCEEEEecC
Q 018067          262 MPLIGLLKSQGKLVLVGA  279 (361)
Q Consensus       262 ~~~~~~l~~~G~~v~~g~  279 (361)
                      ......++++..++.++.
T Consensus        76 ~~l~~~l~~~~iViDvsS   93 (437)
T PRK08655         76 KEVAPHVKEGSLLMDVTS   93 (437)
T ss_pred             HHHHhhCCCCCEEEEccc
Confidence            222333455666666664

>PLN02897 tetrahydrofolate dehydrogenase/cyclohydrolase, putative

Probab=95.59  E-value=0.091  Score=48.26  Aligned_cols=96  Identities=15%  Similarity=0.110  Sum_probs=74.6

Q ss_pred             cccchhhhhhhhHhhhcCCCCCCCEEEEEcC-ChHHHHHHHHHHHcCCeEEEEeCCchhHHHHHHHcCCCEEecCCCHHH
Q 018067          162 APLLCAGITVYSPLRFYGLDKPGMHVGVVGL-GGLGHVAVKFAKAMGVKVTVISTSPSKKSEAIERLGADSFLVSRDQDE  240 (361)
Q Consensus       162 a~l~~~~~ta~~~l~~~~~~~~g~~vlV~Ga-g~vG~~a~~la~~~g~~vi~~~~~~~~~~~~~~~~g~~~vv~~~~~~~  240 (361)
                      ..+||+.......+++..---.|++|+|+|- ..+|.=.+.++...+++|++..+....                     
T Consensus       192 ~~~PCTp~avi~LL~~~~i~l~GK~vvVIGRS~iVGkPla~LL~~~~ATVTicHs~T~n---------------------  250 (345)
T PLN02897        192 LFVSCTPKGCVELLIRSGVEIAGKNAVVIGRSNIVGLPMSLLLQRHDATVSTVHAFTKD---------------------  250 (345)
T ss_pred             CCcCCCHHHHHHHHHHhCCCCCCCEEEEECCCccccHHHHHHHHHCCCEEEEEcCCCCC---------------------
Confidence            4567777777777877764468999999996 889999999999999999877654322                     


Q ss_pred             HHHhcCCccEEEEcCCCcccHHHHHhccccCCEEEEecCC
Q 018067          241 MQAAMGTMDGIIDTVSAVHPLMPLIGLLKSQGKLVLVGAP  280 (361)
Q Consensus       241 ~~~~~~g~d~vid~~g~~~~~~~~~~~l~~~G~~v~~g~~  280 (361)
                      +.+.+..+|++|-++|.+..  --.+.+++|..+|++|..
T Consensus       251 l~~~~~~ADIvIsAvGkp~~--v~~d~vk~GavVIDVGin  288 (345)
T PLN02897        251 PEQITRKADIVIAAAGIPNL--VRGSWLKPGAVVIDVGTT  288 (345)
T ss_pred             HHHHHhhCCEEEEccCCcCc--cCHHHcCCCCEEEEcccc
Confidence            22344568999999999883  346788999999999974

>PRK08303 short chain dehydrogenase; Provisional

Probab=95.59  E-value=0.078  Score=48.62  Aligned_cols=74  Identities=20%  Similarity=0.220  Sum_probs=49.9

Q ss_pred             CCCEEEEEcC-ChHHHHHHHHHHHcCCeEEEEeCCc----------hhHHHHH---HHcCCCE---EecCCCHHHHHHh-
Q 018067          183 PGMHVGVVGL-GGLGHVAVKFAKAMGVKVTVISTSP----------SKKSEAI---ERLGADS---FLVSRDQDEMQAA-  244 (361)
Q Consensus       183 ~g~~vlV~Ga-g~vG~~a~~la~~~g~~vi~~~~~~----------~~~~~~~---~~~g~~~---vv~~~~~~~~~~~-  244 (361)
                      .|+++||.|+ +++|.++++.+...|++|++++++.          ++...+.   +..|...   ..|..+++.++.+ 
T Consensus         7 ~~k~~lITGgs~GIG~aia~~la~~G~~Vv~~~r~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~Dv~~~~~v~~~~   86 (305)
T PRK08303          7 RGKVALVAGATRGAGRGIAVELGAAGATVYVTGRSTRARRSEYDRPETIEETAELVTAAGGRGIAVQVDHLVPEQVRALV   86 (305)
T ss_pred             CCCEEEEeCCCchHHHHHHHHHHHCCCEEEEEecccccccccccccchHHHHHHHHHhcCCceEEEEcCCCCHHHHHHHH
Confidence            4788999997 8999999999999999999998863          2333332   2334321   2344454433322 


Q ss_pred             ------cCCccEEEEcC-C
Q 018067          245 ------MGTMDGIIDTV-S  256 (361)
Q Consensus       245 ------~~g~d~vid~~-g  256 (361)
                            .+++|++|+++ |
T Consensus        87 ~~~~~~~g~iDilVnnA~g  105 (305)
T PRK08303         87 ERIDREQGRLDILVNDIWG  105 (305)
T ss_pred             HHHHHHcCCccEEEECCcc
Confidence                  24799999998 6

>PLN02819 lysine-ketoglutarate reductase/saccharopine dehydrogenase

Probab=95.59  E-value=0.18  Score=53.35  Aligned_cols=136  Identities=13%  Similarity=0.106  Sum_probs=84.3

Q ss_pred             CCCEEEEEcCChHHHHHHHHHHHc-CCe-------------EEEEeCCchhHHHHHHHc-CCC-EEecCCCHHHHHHhcC
Q 018067          183 PGMHVGVVGLGGLGHVAVKFAKAM-GVK-------------VTVISTSPSKKSEAIERL-GAD-SFLVSRDQDEMQAAMG  246 (361)
Q Consensus       183 ~g~~vlV~Gag~vG~~a~~la~~~-g~~-------------vi~~~~~~~~~~~~~~~~-g~~-~vv~~~~~~~~~~~~~  246 (361)
                      ..++|+|+|+|.+|..++..+... +++             |.+.+.+.++..++++.+ +++ ..+|..+.+.+.++..
T Consensus       568 ~~~rIlVLGAG~VG~~~a~~La~~~~~~~~~~~~~~~~~~lV~VaD~~~~~a~~la~~~~~~~~v~lDv~D~e~L~~~v~  647 (1042)
T PLN02819        568 KSQNVLILGAGRVCRPAAEYLASVKTISYYGDDSEEPTDVHVIVASLYLKDAKETVEGIENAEAVQLDVSDSESLLKYVS  647 (1042)
T ss_pred             cCCcEEEECCCHHHHHHHHHHHhCcCccccccccccccccEEEEECCCHHHHHHHHHhcCCCceEEeecCCHHHHHHhhc
Confidence            356899999999999999888654 334             666666666666676666 443 3455677777776656


Q ss_pred             CccEEEEcCCCcccHHHHHhccccCCEEEEecCCCCCcccChHHHHhCCcEEEecccCCHHHHHH--HHHHHHcC
Q 018067          247 TMDGIIDTVSAVHPLMPLIGLLKSQGKLVLVGAPEKPLELPAFSLLMGRKIVGGSMIGGMKETQE--MIDFAAKH  319 (361)
Q Consensus       247 g~d~vid~~g~~~~~~~~~~~l~~~G~~v~~g~~~~~~~~~~~~~~~~~~~i~g~~~~~~~~~~~--~~~ll~~~  319 (361)
                      ++|+|+.++....-...+..+++.+-.++..........--....-.+++.+...+.... -+..  +.+++.++
T Consensus       648 ~~DaVIsalP~~~H~~VAkaAieaGkHvv~eky~~~e~~~L~e~Ak~AGV~~m~e~GlDP-Gid~~lA~~~Id~~  721 (1042)
T PLN02819        648 QVDVVISLLPASCHAVVAKACIELKKHLVTASYVSEEMSALDSKAKEAGITILCEMGLDP-GIDHMMAMKMIDDA  721 (1042)
T ss_pred             CCCEEEECCCchhhHHHHHHHHHcCCCEEECcCCHHHHHHHHHHHHHcCCEEEECCccCH-HHHHHHHHHHHHhh
Confidence            799999999986546677777777777766542111110001112235566666555322 2334  44555553

>PRK06179 short chain dehydrogenase; Provisional

Probab=95.59  E-value=0.06  Score=48.16  Aligned_cols=71  Identities=23%  Similarity=0.320  Sum_probs=50.0

Q ss_pred             CCEEEEEcC-ChHHHHHHHHHHHcCCeEEEEeCCchhHHHHHHHcCCC-EEecCCCHHHHHHh-------cCCccEEEEc
Q 018067          184 GMHVGVVGL-GGLGHVAVKFAKAMGVKVTVISTSPSKKSEAIERLGAD-SFLVSRDQDEMQAA-------MGTMDGIIDT  254 (361)
Q Consensus       184 g~~vlV~Ga-g~vG~~a~~la~~~g~~vi~~~~~~~~~~~~~~~~g~~-~vv~~~~~~~~~~~-------~~g~d~vid~  254 (361)
                      +++++|.|+ |.+|..+++.+...|++|++++++.++....   .+.. ...|..+++.+..+       .+++|++|++
T Consensus         4 ~~~vlVtGasg~iG~~~a~~l~~~g~~V~~~~r~~~~~~~~---~~~~~~~~D~~d~~~~~~~~~~~~~~~g~~d~li~~   80 (270)
T PRK06179          4 SKVALVTGASSGIGRATAEKLARAGYRVFGTSRNPARAAPI---PGVELLELDVTDDASVQAAVDEVIARAGRIDVLVNN   80 (270)
T ss_pred             CCEEEEecCCCHHHHHHHHHHHHCCCEEEEEeCChhhcccc---CCCeeEEeecCCHHHHHHHHHHHHHhCCCCCEEEEC
Confidence            467999997 9999999999999999999999876543221   1222 23355555444332       2468999999


Q ss_pred             CCC
Q 018067          255 VSA  257 (361)
Q Consensus       255 ~g~  257 (361)
                      +|.
T Consensus        81 ag~   83 (270)
T PRK06179         81 AGV   83 (270)
T ss_pred             CCC
Confidence            985

>PRK09135 pteridine reductase; Provisional

Probab=95.58  E-value=0.076  Score=46.61  Aligned_cols=75  Identities=15%  Similarity=0.203  Sum_probs=49.8

Q ss_pred             CCCEEEEEcC-ChHHHHHHHHHHHcCCeEEEEeCCchh-HHHHHHHc----CCC---EEecCCCHHHHHHh-------cC
Q 018067          183 PGMHVGVVGL-GGLGHVAVKFAKAMGVKVTVISTSPSK-KSEAIERL----GAD---SFLVSRDQDEMQAA-------MG  246 (361)
Q Consensus       183 ~g~~vlV~Ga-g~vG~~a~~la~~~g~~vi~~~~~~~~-~~~~~~~~----g~~---~vv~~~~~~~~~~~-------~~  246 (361)
                      .+.++||.|+ |.+|..++..+...|++|++++++.++ ...+.+++    +..   ...|..+.+.+..+       .+
T Consensus         5 ~~~~vlItGa~g~iG~~l~~~l~~~g~~v~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~~Dl~~~~~~~~~~~~~~~~~~   84 (249)
T PRK09135          5 SAKVALITGGARRIGAAIARTLHAAGYRVAIHYHRSAAEADALAAELNALRPGSAAALQADLLDPDALPELVAACVAAFG   84 (249)
T ss_pred             CCCEEEEeCCCchHHHHHHHHHHHCCCEEEEEcCCCHHHHHHHHHHHHhhcCCceEEEEcCCCCHHHHHHHHHHHHHHcC
Confidence            4578999998 999999999999899999999886432 33322221    111   12355554443332       24


Q ss_pred             CccEEEEcCCC
Q 018067          247 TMDGIIDTVSA  257 (361)
Q Consensus       247 g~d~vid~~g~  257 (361)
                      ++|++|.++|.
T Consensus        85 ~~d~vi~~ag~   95 (249)
T PRK09135         85 RLDALVNNASS   95 (249)
T ss_pred             CCCEEEECCCC
Confidence            68999999983

>PRK12823 benD 1,6-dihydroxycyclohexa-2,4-diene-1-carboxylate dehydrogenase; Provisional

Probab=95.57  E-value=0.096  Score=46.49  Aligned_cols=74  Identities=27%  Similarity=0.313  Sum_probs=50.1

Q ss_pred             CCCEEEEEcC-ChHHHHHHHHHHHcCCeEEEEeCCchhHHHHHHH---cCCC---EEecCCCHHHHHH----h---cCCc
Q 018067          183 PGMHVGVVGL-GGLGHVAVKFAKAMGVKVTVISTSPSKKSEAIER---LGAD---SFLVSRDQDEMQA----A---MGTM  248 (361)
Q Consensus       183 ~g~~vlV~Ga-g~vG~~a~~la~~~g~~vi~~~~~~~~~~~~~~~---~g~~---~vv~~~~~~~~~~----~---~~g~  248 (361)
                      .++++||.|+ |.+|..+++.+...|++|+++++++. ...+.++   .+.+   ...|..+.+.+..    +   .+++
T Consensus         7 ~~k~vlVtGas~gIG~~la~~l~~~G~~v~~~~r~~~-~~~~~~~~~~~~~~~~~~~~D~~~~~~~~~~~~~~~~~~~~i   85 (260)
T PRK12823          7 AGKVVVVTGAAQGIGRGVALRAAAEGARVVLVDRSEL-VHEVAAELRAAGGEALALTADLETYAGAQAAMAAAVEAFGRI   85 (260)
T ss_pred             CCCEEEEeCCCchHHHHHHHHHHHCCCEEEEEeCchH-HHHHHHHHHhcCCeEEEEEEeCCCHHHHHHHHHHHHHHcCCC
Confidence            4678999997 99999999999999999999888743 2233232   2332   1235555433222    2   2479


Q ss_pred             cEEEEcCCC
Q 018067          249 DGIIDTVSA  257 (361)
Q Consensus       249 d~vid~~g~  257 (361)
                      |++|+++|.
T Consensus        86 d~lv~nAg~   94 (260)
T PRK12823         86 DVLINNVGG   94 (260)
T ss_pred             eEEEECCcc
Confidence            999999974

>TIGR00438 rrmJ cell division protein FtsJ

Probab=95.57  E-value=0.13  Score=43.39  Aligned_cols=98  Identities=20%  Similarity=0.177  Sum_probs=59.3

Q ss_pred             hcCCCCCCCEEEEEcCChHHHHHHHHHHHcC-CeEEEEeCCchhHHHHHHHcCCCEE-ecCCCHHHH---HH-hc-CCcc
Q 018067          177 FYGLDKPGMHVGVVGLGGLGHVAVKFAKAMG-VKVTVISTSPSKKSEAIERLGADSF-LVSRDQDEM---QA-AM-GTMD  249 (361)
Q Consensus       177 ~~~~~~~g~~vlV~Gag~vG~~a~~la~~~g-~~vi~~~~~~~~~~~~~~~~g~~~v-v~~~~~~~~---~~-~~-~g~d  249 (361)
                      +...+++|++||.+|+|.-+++.....+..+ .+|+.++.++..     ...++..+ .+..+.+.+   .+ .. +++|
T Consensus        26 ~~~~i~~g~~VLDiG~GtG~~~~~l~~~~~~~~~v~~vDis~~~-----~~~~i~~~~~d~~~~~~~~~l~~~~~~~~~D  100 (188)
T TIGR00438        26 KFKLIKPGDTVLDLGAAPGGWSQVAVEQVGGKGRVIAVDLQPMK-----PIENVDFIRGDFTDEEVLNKIRERVGDDKVD  100 (188)
T ss_pred             HhcccCCCCEEEEecCCCCHHHHHHHHHhCCCceEEEEeccccc-----cCCCceEEEeeCCChhHHHHHHHHhCCCCcc
Confidence            3555689999999999875654444444433 489999888753     11233321 133333222   22 22 3699


Q ss_pred             EEEEc-C----CC------------cccHHHHHhccccCCEEEEecC
Q 018067          250 GIIDT-V----SA------------VHPLMPLIGLLKSQGKLVLVGA  279 (361)
Q Consensus       250 ~vid~-~----g~------------~~~~~~~~~~l~~~G~~v~~g~  279 (361)
                      +|+.. .    |.            ...+..+.+.|+++|+++....
T Consensus       101 ~V~~~~~~~~~g~~~~~~~~~~~~~~~~l~~~~~~LkpgG~lvi~~~  147 (188)
T TIGR00438       101 VVMSDAAPNISGYWDIDHLRSIDLVELALDIAKEVLKPKGNFVVKVF  147 (188)
T ss_pred             EEEcCCCCCCCCCccccHHHHHHHHHHHHHHHHHHccCCCEEEEEEc
Confidence            99952 1    21            2346778999999999998643

>PRK08416 7-alpha-hydroxysteroid dehydrogenase; Provisional

Probab=95.57  E-value=0.078  Score=47.20  Aligned_cols=74  Identities=18%  Similarity=0.197  Sum_probs=49.4

Q ss_pred             CCCEEEEEcC-ChHHHHHHHHHHHcCCeEEEEeCC-chhHHHHHHH----cCCC---EEecCCCHHHHHHh-------cC
Q 018067          183 PGMHVGVVGL-GGLGHVAVKFAKAMGVKVTVISTS-PSKKSEAIER----LGAD---SFLVSRDQDEMQAA-------MG  246 (361)
Q Consensus       183 ~g~~vlV~Ga-g~vG~~a~~la~~~g~~vi~~~~~-~~~~~~~~~~----~g~~---~vv~~~~~~~~~~~-------~~  246 (361)
                      +++++||.|+ +++|..++..+...|++|+++.+. +++...+.++    .+..   ...|..+++.+..+       .+
T Consensus         7 ~~k~vlItGas~gIG~~ia~~l~~~G~~v~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~D~~~~~~~~~~~~~~~~~~g   86 (260)
T PRK08416          7 KGKTLVISGGTRGIGKAIVYEFAQSGVNIAFTYNSNVEEANKIAEDLEQKYGIKAKAYPLNILEPETYKELFKKIDEDFD   86 (260)
T ss_pred             CCCEEEEeCCCchHHHHHHHHHHHCCCEEEEEcCCCHHHHHHHHHHHHHhcCCceEEEEcCCCCHHHHHHHHHHHHHhcC
Confidence            5789999998 999999999999999999887654 3333333222    2322   12355555433322       24


Q ss_pred             CccEEEEcCC
Q 018067          247 TMDGIIDTVS  256 (361)
Q Consensus       247 g~d~vid~~g  256 (361)
                      .+|++|+++|
T Consensus        87 ~id~lv~nAg   96 (260)
T PRK08416         87 RVDFFISNAI   96 (260)
T ss_pred             CccEEEECcc
Confidence            6899999986

>PRK08261 fabG 3-ketoacyl-(acyl-carrier-protein) reductase; Provisional

Probab=95.56  E-value=0.015  Score=56.41  Aligned_cols=93  Identities=15%  Similarity=0.171  Sum_probs=58.2

Q ss_pred             cCCCCCCCEEE----EEcC-ChHHHHHHHHHHHcCCeEEEEeCCchhHHHHHHHcCCC-EEecCCCHHHHHHhcCCccEE
Q 018067          178 YGLDKPGMHVG----VVGL-GGLGHVAVKFAKAMGVKVTVISTSPSKKSEAIERLGAD-SFLVSRDQDEMQAAMGTMDGI  251 (361)
Q Consensus       178 ~~~~~~g~~vl----V~Ga-g~vG~~a~~la~~~g~~vi~~~~~~~~~~~~~~~~g~~-~vv~~~~~~~~~~~~~g~d~v  251 (361)
                      ..++++|+.+|    |+|+ |++|.+++|+++..|++|+.+.+...+.... +..+.+ .++|.+..+....+..-    
T Consensus        28 l~~~~~~~~~~~~~~l~~~~~g~~~~~~~~~~~~g~~v~~~~~~~~~~~~~-~~~~~~~~~~d~~~~~~~~~l~~~----  102 (450)
T PRK08261         28 LRRYRPGQPLLDGPVLVGGAGRLAEALAALLAGLGYDVVANNDGGLTWAAG-WGDRFGALVFDATGITDPADLKAL----  102 (450)
T ss_pred             ccCCCCCCCCCCCceEEccCchhHHHHHHHHhhCCCeeeecCccccccccC-cCCcccEEEEECCCCCCHHHHHHH----
Confidence            45567888887    7765 9999999999999999999877665432111 122333 34444332111111100    


Q ss_pred             EEcCCCcccHHHHHhccccCCEEEEecCCC
Q 018067          252 IDTVSAVHPLMPLIGLLKSQGKLVLVGAPE  281 (361)
Q Consensus       252 id~~g~~~~~~~~~~~l~~~G~~v~~g~~~  281 (361)
                            ...++..++.+.++|+++.++...
T Consensus       103 ------~~~~~~~l~~l~~~griv~i~s~~  126 (450)
T PRK08261        103 ------YEFFHPVLRSLAPCGRVVVLGRPP  126 (450)
T ss_pred             ------HHHHHHHHHhccCCCEEEEEcccc
Confidence                  012556778888999999998754

>PRK06077 fabG 3-ketoacyl-(acyl-carrier-protein) reductase; Provisional

Probab=95.54  E-value=0.23  Score=43.75  Aligned_cols=99  Identities=15%  Similarity=0.175  Sum_probs=61.9

Q ss_pred             CCCEEEEEcC-ChHHHHHHHHHHHcCCeEEEEeCCc-hhHHHH---HHHcCCC-E--EecCCCHHHHHHh-------cCC
Q 018067          183 PGMHVGVVGL-GGLGHVAVKFAKAMGVKVTVISTSP-SKKSEA---IERLGAD-S--FLVSRDQDEMQAA-------MGT  247 (361)
Q Consensus       183 ~g~~vlV~Ga-g~vG~~a~~la~~~g~~vi~~~~~~-~~~~~~---~~~~g~~-~--vv~~~~~~~~~~~-------~~g  247 (361)
                      .+.++||.|+ |.+|...+..+...|++++++.+.. +.....   .+..+.. .  ..|..+++.+..+       .++
T Consensus         5 ~~~~vlitGasg~iG~~l~~~l~~~g~~v~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~D~~~~~~~~~~~~~~~~~~~~   84 (252)
T PRK06077          5 KDKVVVVTGSGRGIGRAIAVRLAKEGSLVVVNAKKRAEEMNETLKMVKENGGEGIGVLADVSTREGCETLAKATIDRYGV   84 (252)
T ss_pred             CCcEEEEeCCCChHHHHHHHHHHHCCCEEEEEeCCChHHHHHHHHHHHHcCCeeEEEEeccCCHHHHHHHHHHHHHHcCC
Confidence            3678999997 9999999998889999988776543 222222   1233332 1  2344444433222       247


Q ss_pred             ccEEEEcCCCcc-------------------------cHHHHHhccccCCEEEEecCCC
Q 018067          248 MDGIIDTVSAVH-------------------------PLMPLIGLLKSQGKLVLVGAPE  281 (361)
Q Consensus       248 ~d~vid~~g~~~-------------------------~~~~~~~~l~~~G~~v~~g~~~  281 (361)
                      +|++|.++|...                         ..+.+...++..|+++.++...
T Consensus        85 ~d~vi~~ag~~~~~~~~~~~~~~~~~~~~~n~~~~~~~~~~~~~~~~~~~~iv~~sS~~  143 (252)
T PRK06077         85 ADILVNNAGLGLFSPFLNVDDKLIDKHISTDFKSVIYCSQELAKEMREGGAIVNIASVA  143 (252)
T ss_pred             CCEEEECCCCCCCCChhhCCHHHHHHHHhHhCHHHHHHHHHHHHHhhcCcEEEEEcchh
Confidence            999999998410                         1223445556778999998743

>PLN02616 tetrahydrofolate dehydrogenase/cyclohydrolase, putative

Probab=95.54  E-value=0.095  Score=48.39  Aligned_cols=96  Identities=17%  Similarity=0.179  Sum_probs=74.2

Q ss_pred             cccchhhhhhhhHhhhcCCCCCCCEEEEEcC-ChHHHHHHHHHHHcCCeEEEEeCCchhHHHHHHHcCCCEEecCCCHHH
Q 018067          162 APLLCAGITVYSPLRFYGLDKPGMHVGVVGL-GGLGHVAVKFAKAMGVKVTVISTSPSKKSEAIERLGADSFLVSRDQDE  240 (361)
Q Consensus       162 a~l~~~~~ta~~~l~~~~~~~~g~~vlV~Ga-g~vG~~a~~la~~~g~~vi~~~~~~~~~~~~~~~~g~~~vv~~~~~~~  240 (361)
                      ..+||+.......|+...---.|++|+|+|- ..+|.=.+.++...+++|++..+.....                    
T Consensus       209 ~f~PCTp~avielL~~y~i~l~GK~vvVIGRS~iVGkPLa~LL~~~~ATVTicHs~T~nl--------------------  268 (364)
T PLN02616        209 LFVPCTPKGCIELLHRYNVEIKGKRAVVIGRSNIVGMPAALLLQREDATVSIVHSRTKNP--------------------  268 (364)
T ss_pred             CCCCCCHHHHHHHHHHhCCCCCCCEEEEECCCccccHHHHHHHHHCCCeEEEeCCCCCCH--------------------
Confidence            3567777777777777664458999999996 8899999999999999998875543222                    


Q ss_pred             HHHhcCCccEEEEcCCCcccHHHHHhccccCCEEEEecCC
Q 018067          241 MQAAMGTMDGIIDTVSAVHPLMPLIGLLKSQGKLVLVGAP  280 (361)
Q Consensus       241 ~~~~~~g~d~vid~~g~~~~~~~~~~~l~~~G~~v~~g~~  280 (361)
                       .+....+|++|-++|.+..  ---+.+++|..+|++|..
T Consensus       269 -~~~~r~ADIVIsAvGkp~~--i~~d~vK~GAvVIDVGIn  305 (364)
T PLN02616        269 -EEITREADIIISAVGQPNM--VRGSWIKPGAVVIDVGIN  305 (364)
T ss_pred             -HHHHhhCCEEEEcCCCcCc--CCHHHcCCCCEEEecccc
Confidence             2334468999999999873  346788999999999964

>PF07991 IlvN: Acetohydroxy acid isomeroreductase, catalytic domain; InterPro: IPR013116 Acetohydroxy acid isomeroreductase catalyses the conversion of acetohydroxy acids into dihydroxy valerates

Probab=95.54  E-value=0.094  Score=42.71  Aligned_cols=87  Identities=22%  Similarity=0.229  Sum_probs=56.8

Q ss_pred             CCCEEEEEcCChHHHHHHHHHHHcCCeEEEEeCCchhHHHHHHHcCCCEEecCCCHHHHHHhcCCccEEEEcCCCcccHH
Q 018067          183 PGMHVGVVGLGGLGHVAVKFAKAMGVKVTVISTSPSKKSEAIERLGADSFLVSRDQDEMQAAMGTMDGIIDTVSAVHPLM  262 (361)
Q Consensus       183 ~g~~vlV~Gag~vG~~a~~la~~~g~~vi~~~~~~~~~~~~~~~~g~~~vv~~~~~~~~~~~~~g~d~vid~~g~~~~~~  262 (361)
                      .+++|.|+|-|..|.+.++-+|..|.+|++..+...+..+.+++-|....       .+.++....|+|+-.+.... ..
T Consensus         3 ~~k~IAViGyGsQG~a~AlNLrDSG~~V~Vglr~~s~s~~~A~~~Gf~v~-------~~~eAv~~aDvV~~L~PD~~-q~   74 (165)
T PF07991_consen    3 KGKTIAVIGYGSQGHAHALNLRDSGVNVIVGLREGSASWEKAKADGFEVM-------SVAEAVKKADVVMLLLPDEV-QP   74 (165)
T ss_dssp             CTSEEEEES-SHHHHHHHHHHHHCC-EEEEEE-TTCHHHHHHHHTT-ECC-------EHHHHHHC-SEEEE-S-HHH-HH
T ss_pred             CCCEEEEECCChHHHHHHHHHHhCCCCEEEEecCCCcCHHHHHHCCCeec-------cHHHHHhhCCEEEEeCChHH-HH
Confidence            57899999999999999999999999999999888766666688886421       22344456899998887643 33


Q ss_pred             HH-----HhccccCCEEEEe
Q 018067          263 PL-----IGLLKSQGKLVLV  277 (361)
Q Consensus       263 ~~-----~~~l~~~G~~v~~  277 (361)
                      ..     ...|+++-.+++.
T Consensus        75 ~vy~~~I~p~l~~G~~L~fa   94 (165)
T PF07991_consen   75 EVYEEEIAPNLKPGATLVFA   94 (165)
T ss_dssp             HHHHHHHHHHS-TT-EEEES
T ss_pred             HHHHHHHHhhCCCCCEEEeC
Confidence            33     3466666666554

This reaction is the second in the synthetic pathway of the essential branched side chain amino acids valine and isoleucine.; GO: 0004455 ketol-acid reductoisomerase activity, 0008652 cellular amino acid biosynthetic process, 0055114 oxidation-reduction process; PDB: 1QMG_A 1YVE_J 3FR8_B 3FR7_A 1NP3_C 1YRL_C.

>PF02737 3HCDH_N: 3-hydroxyacyl-CoA dehydrogenase, NAD binding domain; InterPro: IPR006176 3-hydroxyacyl-CoA dehydrogenase (1

Probab=95.54  E-value=0.43  Score=40.06  Aligned_cols=38  Identities=29%  Similarity=0.440  Sum_probs=31.3

Q ss_pred             EEEEEcCChHHHHHHHHHHHcCCeEEEEeCCchhHHHH
Q 018067          186 HVGVVGLGGLGHVAVKFAKAMGVKVTVISTSPSKKSEA  223 (361)
Q Consensus       186 ~vlV~Gag~vG~~a~~la~~~g~~vi~~~~~~~~~~~~  223 (361)
                      +|.|+|+|.+|...++++-..|.+|++++.+++.....
T Consensus         1 ~V~ViGaG~mG~~iA~~~a~~G~~V~l~d~~~~~l~~~   38 (180)
T PF02737_consen    1 KVAVIGAGTMGRGIAALFARAGYEVTLYDRSPEALERA   38 (180)
T ss_dssp             EEEEES-SHHHHHHHHHHHHTTSEEEEE-SSHHHHHHH
T ss_pred             CEEEEcCCHHHHHHHHHHHhCCCcEEEEECChHHHHhh
Confidence            58899999999999999999999999999998765444

1.1.35 from EC) (HCDH) [] is an enzyme involved in fatty acid metabolism, it catalyzes the reduction of 3-hydroxyacyl-CoA to 3-oxoacyl-CoA. Most eukaryotic cells have 2 fatty-acid beta-oxidation systems, one located in mitochondria and the other in peroxisomes. In peroxisomes 3-hydroxyacyl-CoA dehydrogenase forms, with enoyl-CoA hydratase (ECH) and 3,2-trans-enoyl-CoA isomerase (ECI) a multifunctional enzyme where the N-terminal domain bears the hydratase/isomerase activities and the C-terminal domain the dehydrogenase activity. There are two mitochondrial enzymes: one which is monofunctional and the other which is, like its peroxisomal counterpart, multifunctional. In Escherichia coli (gene fadB) and Pseudomonas fragi (gene faoA) HCDH is part of a multifunctional enzyme which also contains an ECH/ECI domain as well as a 3-hydroxybutyryl-CoA epimerase domain []. There are two major regions of similarity in the sequences of proteins of the HCDH family, the first one located in the N-terminal, corresponds to the NAD-binding site, the second one is located in the centre of the sequence. This represents the C-terminal domain which is also found in lambda crystallin. Some proteins include two copies of this domain.; GO: 0003857 3-hydroxyacyl-CoA dehydrogenase activity, 0016491 oxidoreductase activity, 0006631 fatty acid metabolic process, 0055114 oxidation-reduction process; PDB: 3K6J_A 1ZCJ_A 2X58_A 1ZEJ_A 3HDH_B 2WTB_A 1WDL_B 2D3T_B 1WDK_A 1WDM_B ....

>PF00106 adh_short: short chain dehydrogenase alcohol dehydrogenase superfamily signature glucose/ribitol dehydrogenase family signature; InterPro: IPR002198 The short-chain dehydrogenases/reductases family (SDR) [] is a very large family of enzymes, most of which are known to be NAD- or NADP-dependent oxidoreductases

Probab=95.53  E-value=0.05  Score=44.63  Aligned_cols=73  Identities=26%  Similarity=0.387  Sum_probs=47.8

Q ss_pred             CEEEEEcC-ChHHHHHHHHHHHcCC-eEEEEeCC--chhHHHHHHHc---CCCE-E--ecCCCHHHHHHh-------cCC
Q 018067          185 MHVGVVGL-GGLGHVAVKFAKAMGV-KVTVISTS--PSKKSEAIERL---GADS-F--LVSRDQDEMQAA-------MGT  247 (361)
Q Consensus       185 ~~vlV~Ga-g~vG~~a~~la~~~g~-~vi~~~~~--~~~~~~~~~~~---g~~~-v--v~~~~~~~~~~~-------~~g  247 (361)
                      ++++|+|+ +++|...++.+-..|. +|+++.++  .++...+.+++   +... +  .|..+.+.++.+       .+.
T Consensus         1 k~~lItGa~~giG~~~a~~l~~~g~~~v~~~~r~~~~~~~~~l~~~l~~~~~~~~~~~~D~~~~~~~~~~~~~~~~~~~~   80 (167)
T PF00106_consen    1 KTVLITGASSGIGRALARALARRGARVVILTSRSEDSEGAQELIQELKAPGAKITFIECDLSDPESIRALIEEVIKRFGP   80 (167)
T ss_dssp             EEEEEETTTSHHHHHHHHHHHHTTTEEEEEEESSCHHHHHHHHHHHHHHTTSEEEEEESETTSHHHHHHHHHHHHHHHSS
T ss_pred             CEEEEECCCCHHHHHHHHHHHhcCceEEEEeeeccccccccccccccccccccccccccccccccccccccccccccccc
Confidence            36899997 9999999999888877 67777777  44444443333   4321 1  233444333322       247


Q ss_pred             ccEEEEcCCC
Q 018067          248 MDGIIDTVSA  257 (361)
Q Consensus       248 ~d~vid~~g~  257 (361)
                      +|++|.++|.
T Consensus        81 ld~li~~ag~   90 (167)
T PF00106_consen   81 LDILINNAGI   90 (167)
T ss_dssp             ESEEEEECSC
T ss_pred             cccccccccc
Confidence            9999999986

As the first member of this family to be characterised was Drosophila alcohol dehydrogenase, this family used to be called [, , ] 'insect-type', or 'short-chain' alcohol dehydrogenases. Most member of this family are proteins of about 250 to 300 amino acid residues. Most dehydrogenases possess at least 2 domains [], the first binding the coenzyme, often NAD, and the second binding the substrate. This latter domain determines the substrate specificity and contains amino acids involved in catalysis. Little sequence similarity has been found in the coenzyme binding domain although there is a large degree of structural similarity, and it has therefore been suggested that the structure of dehydrogenases has arisen through gene fusion of a common ancestral coenzyme nucleotide sequence with various substrate specific domains [].; GO: 0016491 oxidoreductase activity, 0008152 metabolic process; PDB: 3QWI_D 3QWF_G 3IS3_A 3QWH_C 3ITD_A 3L77_A 1HDC_C 2HSD_C 3KVO_A 3KZV_A ....

>TIGR02632 RhaD_aldol-ADH rhamnulose-1-phosphate aldolase/alcohol dehydrogenase

Probab=95.52  E-value=0.054  Score=55.37  Aligned_cols=75  Identities=20%  Similarity=0.274  Sum_probs=54.0

Q ss_pred             CCCEEEEEcC-ChHHHHHHHHHHHcCCeEEEEeCCchhHHHHHHHc----CCC----EEecCCCHHHHHHh-------cC
Q 018067          183 PGMHVGVVGL-GGLGHVAVKFAKAMGVKVTVISTSPSKKSEAIERL----GAD----SFLVSRDQDEMQAA-------MG  246 (361)
Q Consensus       183 ~g~~vlV~Ga-g~vG~~a~~la~~~g~~vi~~~~~~~~~~~~~~~~----g~~----~vv~~~~~~~~~~~-------~~  246 (361)
                      .++++||.|+ |++|..+++.+...|++|++++++.++...+.+++    +..    ...|-.+.+.+.++       .+
T Consensus       413 ~gkvvLVTGasggIG~aiA~~La~~Ga~Vvi~~r~~~~~~~~~~~l~~~~~~~~~~~v~~Dvtd~~~v~~a~~~i~~~~g  492 (676)
T TIGR02632       413 ARRVAFVTGGAGGIGRETARRLAAEGAHVVLADLNLEAAEAVAAEINGQFGAGRAVALKMDVTDEQAVKAAFADVALAYG  492 (676)
T ss_pred             CCCEEEEeCCCcHHHHHHHHHHHhCCCEEEEEeCCHHHHHHHHHHHHhhcCCCcEEEEECCCCCHHHHHHHHHHHHHhcC
Confidence            4789999997 99999999999999999999999877655554433    321    12344555444332       24


Q ss_pred             CccEEEEcCCC
Q 018067          247 TMDGIIDTVSA  257 (361)
Q Consensus       247 g~d~vid~~g~  257 (361)
                      ++|++|+++|.
T Consensus       493 ~iDilV~nAG~  503 (676)
T TIGR02632       493 GVDIVVNNAGI  503 (676)
T ss_pred             CCcEEEECCCC
Confidence            79999999985

>TIGR03206 benzo_BadH 2-hydroxycyclohexanecarboxyl-CoA dehydrogenase

Probab=95.52  E-value=0.068  Score=47.03  Aligned_cols=75  Identities=20%  Similarity=0.322  Sum_probs=52.3

Q ss_pred             CCCEEEEEcC-ChHHHHHHHHHHHcCCeEEEEeCCchhHHHHHHHc---CCCE---EecCCCHHHHHHh-------cCCc
Q 018067          183 PGMHVGVVGL-GGLGHVAVKFAKAMGVKVTVISTSPSKKSEAIERL---GADS---FLVSRDQDEMQAA-------MGTM  248 (361)
Q Consensus       183 ~g~~vlV~Ga-g~vG~~a~~la~~~g~~vi~~~~~~~~~~~~~~~~---g~~~---vv~~~~~~~~~~~-------~~g~  248 (361)
                      ++.++||.|+ |.+|..++..+...|++|++++++.++...+.+.+   +.+.   ..|..+.+.+.++       .+++
T Consensus         2 ~~~~ilItGas~~iG~~la~~l~~~g~~v~~~~r~~~~~~~~~~~~~~~~~~~~~~~~d~~~~~~~~~~~~~~~~~~~~~   81 (250)
T TIGR03206         2 KDKTAIVTGGGGGIGGATCRRFAEEGAKVAVFDLNREAAEKVAADIRAKGGNAQAFACDITDRDSVDTAVAAAEQALGPV   81 (250)
T ss_pred             CCCEEEEeCCCChHHHHHHHHHHHCCCEEEEecCCHHHHHHHHHHHHhcCCcEEEEEcCCCCHHHHHHHHHHHHHHcCCC
Confidence            4678999997 99999999999999999999998876655443322   2221   2244444433332       2468


Q ss_pred             cEEEEcCCC
Q 018067          249 DGIIDTVSA  257 (361)
Q Consensus       249 d~vid~~g~  257 (361)
                      |++|.++|.
T Consensus        82 d~vi~~ag~   90 (250)
T TIGR03206        82 DVLVNNAGW   90 (250)
T ss_pred             CEEEECCCC
Confidence            999999974

Members of this protein family are the enzyme 2-hydroxycyclohexanecarboxyl-CoA dehydrogenase. The enzymatic properties were confirmed experimentally in Rhodopseudomonas palustris; the enzyme is homotetrameric, and not sensitive to oxygen. This enzyme is part of proposed pathway for degradation of benzoyl-CoA to 3-hydroxypimeloyl-CoA that differs from the analogous in Thauera aromatica. It also may occur in degradation of the non-aromatic compound cyclohexane-1-carboxylate.

>PRK08264 short chain dehydrogenase; Validated

Probab=95.51  E-value=0.09  Score=45.96  Aligned_cols=71  Identities=25%  Similarity=0.322  Sum_probs=51.3

Q ss_pred             CCCEEEEEcC-ChHHHHHHHHHHHcCC-eEEEEeCCchhHHHHHHHcCCC-E--EecCCCHHHHHHhc---CCccEEEEc
Q 018067          183 PGMHVGVVGL-GGLGHVAVKFAKAMGV-KVTVISTSPSKKSEAIERLGAD-S--FLVSRDQDEMQAAM---GTMDGIIDT  254 (361)
Q Consensus       183 ~g~~vlV~Ga-g~vG~~a~~la~~~g~-~vi~~~~~~~~~~~~~~~~g~~-~--vv~~~~~~~~~~~~---~g~d~vid~  254 (361)
                      .+.+++|+|+ |.+|..+++.+...|+ +|++++++.++...    .+.. .  ..|..+.+.+.++.   +.+|++|.+
T Consensus         5 ~~~~vlItGgsg~iG~~la~~l~~~G~~~V~~~~r~~~~~~~----~~~~~~~~~~D~~~~~~~~~~~~~~~~id~vi~~   80 (238)
T PRK08264          5 KGKVVLVTGANRGIGRAFVEQLLARGAAKVYAAARDPESVTD----LGPRVVPLQLDVTDPASVAAAAEAASDVTILVNN   80 (238)
T ss_pred             CCCEEEEECCCchHHHHHHHHHHHCCcccEEEEecChhhhhh----cCCceEEEEecCCCHHHHHHHHHhcCCCCEEEEC
Confidence            4678999987 9999999999999999 99999988765432    3322 1  23455555544433   368999999


Q ss_pred             CCC
Q 018067          255 VSA  257 (361)
Q Consensus       255 ~g~  257 (361)
                      +|.
T Consensus        81 ag~   83 (238)
T PRK08264         81 AGI   83 (238)
T ss_pred             CCc
Confidence            986

>PRK08278 short chain dehydrogenase; Provisional

Probab=95.51  E-value=0.075  Score=47.76  Aligned_cols=75  Identities=24%  Similarity=0.341  Sum_probs=50.8

Q ss_pred             CCCEEEEEcC-ChHHHHHHHHHHHcCCeEEEEeCCchh-------HHHHH---HHcCCCE---EecCCCHHHHHHh----
Q 018067          183 PGMHVGVVGL-GGLGHVAVKFAKAMGVKVTVISTSPSK-------KSEAI---ERLGADS---FLVSRDQDEMQAA----  244 (361)
Q Consensus       183 ~g~~vlV~Ga-g~vG~~a~~la~~~g~~vi~~~~~~~~-------~~~~~---~~~g~~~---vv~~~~~~~~~~~----  244 (361)
                      .++++||.|+ |.+|..++..+...|++|++++++.+.       ...+.   +..+.+.   ..|..+++.+..+    
T Consensus         5 ~~k~vlItGas~gIG~~ia~~l~~~G~~V~~~~r~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~D~~~~~~i~~~~~~~   84 (273)
T PRK08278          5 SGKTLFITGASRGIGLAIALRAARDGANIVIAAKTAEPHPKLPGTIHTAAEEIEAAGGQALPLVGDVRDEDQVAAAVAKA   84 (273)
T ss_pred             CCCEEEEECCCchHHHHHHHHHHHCCCEEEEEecccccccchhhHHHHHHHHHHhcCCceEEEEecCCCHHHHHHHHHHH
Confidence            4678999997 999999999999999999999887542       22222   2233321   2355555443332    


Q ss_pred             ---cCCccEEEEcCCC
Q 018067          245 ---MGTMDGIIDTVSA  257 (361)
Q Consensus       245 ---~~g~d~vid~~g~  257 (361)
                         .+.+|++|+++|.
T Consensus        85 ~~~~g~id~li~~ag~  100 (273)
T PRK08278         85 VERFGGIDICVNNASA  100 (273)
T ss_pred             HHHhCCCCEEEECCCC
Confidence               1479999999885

>PLN02730 enoyl-[acyl-carrier-protein] reductase

Probab=95.48  E-value=0.14  Score=46.86  Aligned_cols=37  Identities=24%  Similarity=0.302  Sum_probs=30.9

Q ss_pred             CCCCEEEEEcC---ChHHHHHHHHHHHcCCeEEEEeCCchh
Q 018067          182 KPGMHVGVVGL---GGLGHVAVKFAKAMGVKVTVISTSPSK  219 (361)
Q Consensus       182 ~~g~~vlV~Ga---g~vG~~a~~la~~~g~~vi~~~~~~~~  219 (361)
                      -.|+++||.|+   .+||.++++.+...|++|++ ++..++
T Consensus         7 l~gk~alITGa~~s~GIG~a~A~~la~~Ga~Vv~-~~~~~~   46 (303)
T PLN02730          7 LRGKRAFIAGVADDNGYGWAIAKALAAAGAEILV-GTWVPA   46 (303)
T ss_pred             CCCCEEEEeCCCCCCcHHHHHHHHHHHCCCEEEE-EeCcch
Confidence            35889999988   88999999999999999988 554443

>PRK12480 D-lactate dehydrogenase; Provisional

Probab=95.48  E-value=0.11  Score=48.25  Aligned_cols=86  Identities=22%  Similarity=0.284  Sum_probs=60.9

Q ss_pred             CCCEEEEEcCChHHHHHHHHHHHcCCeEEEEeCCchhHHHHHHHcCCCEEecCCCHHHHHHhcCCccEEEEcCCCcc---
Q 018067          183 PGMHVGVVGLGGLGHVAVKFAKAMGVKVTVISTSPSKKSEAIERLGADSFLVSRDQDEMQAAMGTMDGIIDTVSAVH---  259 (361)
Q Consensus       183 ~g~~vlV~Gag~vG~~a~~la~~~g~~vi~~~~~~~~~~~~~~~~g~~~vv~~~~~~~~~~~~~g~d~vid~~g~~~---  259 (361)
                      .|.+|.|+|.|.+|...+..++.+|.+|++.+++.+.....     ..    ..  +.+.++....|+|+-++....   
T Consensus       145 ~g~~VgIIG~G~IG~~vA~~L~~~G~~V~~~d~~~~~~~~~-----~~----~~--~~l~ell~~aDiVil~lP~t~~t~  213 (330)
T PRK12480        145 KNMTVAIIGTGRIGAATAKIYAGFGATITAYDAYPNKDLDF-----LT----YK--DSVKEAIKDADIISLHVPANKESY  213 (330)
T ss_pred             CCCEEEEECCCHHHHHHHHHHHhCCCEEEEEeCChhHhhhh-----hh----cc--CCHHHHHhcCCEEEEeCCCcHHHH
Confidence            67889999999999999999999999999998876432211     00    10  123345567899988887542   


Q ss_pred             --cHHHHHhccccCCEEEEecC
Q 018067          260 --PLMPLIGLLKSQGKLVLVGA  279 (361)
Q Consensus       260 --~~~~~~~~l~~~G~~v~~g~  279 (361)
                        .....+..++++..+|.++.
T Consensus       214 ~li~~~~l~~mk~gavlIN~aR  235 (330)
T PRK12480        214 HLFDKAMFDHVKKGAILVNAAR  235 (330)
T ss_pred             HHHhHHHHhcCCCCcEEEEcCC
Confidence              12245667888888888864

>COG3288 PntA NAD/NADP transhydrogenase alpha subunit [Energy production and conversion]

Probab=95.47  E-value=0.11  Score=46.45  Aligned_cols=124  Identities=22%  Similarity=0.172  Sum_probs=82.4

Q ss_pred             CCCCEEEEEcCChHHHHHHHHHHHcCCeEEEEeCCchhHHHHHHHcCCCEEecCCC-----------HHHHH-------H
Q 018067          182 KPGMHVGVVGLGGLGHVAVKFAKAMGVKVTVISTSPSKKSEAIERLGADSFLVSRD-----------QDEMQ-------A  243 (361)
Q Consensus       182 ~~g~~vlV~Gag~vG~~a~~la~~~g~~vi~~~~~~~~~~~~~~~~g~~~vv~~~~-----------~~~~~-------~  243 (361)
                      .++.++++.|.|.+|+.++..++..|+-|...+-...+.++. +.+|+.-.-....           +++..       +
T Consensus       162 v~pA~vlv~G~Gvagl~aiata~~lG~iVt~rdlrm~~Keqv-~s~Ga~f~~~~~ee~~gGYAk~ms~~~~~~q~~~~a~  240 (356)
T COG3288         162 VSPAKVLVIGAGVAGLAAIATAVRLGAIVTARDLRMFKKEQV-ESLGAKFLAVEDEESAGGYAKEMSEEFIAKQAELVAE  240 (356)
T ss_pred             ccchhhhhhhHHHHHHHHHHHHhhcceEEehhhhhhHHhhhh-hhcccccccccccccCCCccccCCHHHHHHHHHHHHH
Confidence            467889999999999999999999999887766666555444 5677642211111           12211       2


Q ss_pred             hcCCccEEEEcCCC-----cc-cHHHHHhccccCCEEEEecCCC-CCccc--ChHHHHhCCcEEEecccCCH
Q 018067          244 AMGTMDGIIDTVSA-----VH-PLMPLIGLLKSQGKLVLVGAPE-KPLEL--PAFSLLMGRKIVGGSMIGGM  306 (361)
Q Consensus       244 ~~~g~d~vid~~g~-----~~-~~~~~~~~l~~~G~~v~~g~~~-~~~~~--~~~~~~~~~~~i~g~~~~~~  306 (361)
                      ...++|+||-++=-     +. ........++||.-++++.... ++.+.  +-.....++++|.|......
T Consensus       241 ~~~~~DivITTAlIPGrpAP~Lvt~~mv~sMkpGSViVDlAa~~GGNce~t~pg~~v~~~gV~iig~~nlp~  312 (356)
T COG3288         241 QAKEVDIVITTALIPGRPAPKLVTAEMVASMKPGSVIVDLAAETGGNCELTEPGKVVTKNGVKIIGYTNLPG  312 (356)
T ss_pred             HhcCCCEEEEecccCCCCCchhhHHHHHHhcCCCcEEEEehhhcCCCcccccCCeEEEeCCeEEEeecCcch
Confidence            22489999987632     11 2457889999999999997643 33322  22345568899999876443

>PRK08063 enoyl-(acyl carrier protein) reductase; Provisional

Probab=95.47  E-value=0.071  Score=46.95  Aligned_cols=75  Identities=20%  Similarity=0.301  Sum_probs=49.8

Q ss_pred             CCCEEEEEcC-ChHHHHHHHHHHHcCCeEEEE-eCCchhHHHHHHH---cCCCE---EecCCCHHHHHHh-------cCC
Q 018067          183 PGMHVGVVGL-GGLGHVAVKFAKAMGVKVTVI-STSPSKKSEAIER---LGADS---FLVSRDQDEMQAA-------MGT  247 (361)
Q Consensus       183 ~g~~vlV~Ga-g~vG~~a~~la~~~g~~vi~~-~~~~~~~~~~~~~---~g~~~---vv~~~~~~~~~~~-------~~g  247 (361)
                      ++.++||.|+ |.+|..++..+...|++|+++ .++.++..++.++   .+...   ..|..+++.+..+       .++
T Consensus         3 ~~~~vlItGa~g~iG~~~a~~l~~~g~~v~~~~~r~~~~~~~~~~~~~~~~~~~~~~~~D~~~~~~~~~~~~~~~~~~~~   82 (250)
T PRK08063          3 SGKVALVTGSSRGIGKAIALRLAEEGYDIAVNYARSRKAAEETAEEIEALGRKALAVKANVGDVEKIKEMFAQIDEEFGR   82 (250)
T ss_pred             CCCEEEEeCCCchHHHHHHHHHHHCCCEEEEEcCCCHHHHHHHHHHHHhcCCeEEEEEcCCCCHHHHHHHHHHHHHHcCC
Confidence            4678999997 999999999999999998764 5555544443332   34321   2344454433322       246


Q ss_pred             ccEEEEcCCC
Q 018067          248 MDGIIDTVSA  257 (361)
Q Consensus       248 ~d~vid~~g~  257 (361)
                      +|++|.++|.
T Consensus        83 id~vi~~ag~   92 (250)
T PRK08063         83 LDVFVNNAAS   92 (250)
T ss_pred             CCEEEECCCC
Confidence            8999999874

>PRK06046 alanine dehydrogenase; Validated

Probab=95.47  E-value=0.11  Score=48.02  Aligned_cols=102  Identities=22%  Similarity=0.290  Sum_probs=67.3

Q ss_pred             CCCCEEEEEcCChHHHHHHHHHHH-cCC-eEEEEeCCchhHHHHHHHc----CCCEEecCCCHHHHHHhcCCccEEEEcC
Q 018067          182 KPGMHVGVVGLGGLGHVAVKFAKA-MGV-KVTVISTSPSKKSEAIERL----GADSFLVSRDQDEMQAAMGTMDGIIDTV  255 (361)
Q Consensus       182 ~~g~~vlV~Gag~vG~~a~~la~~-~g~-~vi~~~~~~~~~~~~~~~~----g~~~vv~~~~~~~~~~~~~g~d~vid~~  255 (361)
                      +...++.|+|+|..|...+..+.. .+. ++.+.+++.++..++++++    +.... ...+.+   +... .|+|+.|+
T Consensus       127 ~~~~~vgiiG~G~qa~~h~~al~~~~~i~~v~v~~r~~~~~~~~~~~~~~~~~~~v~-~~~~~~---~~l~-aDiVv~aT  201 (326)
T PRK06046        127 KDSKVVGIIGAGNQARTQLLALSEVFDLEEVRVYDRTKSSAEKFVERMSSVVGCDVT-VAEDIE---EACD-CDILVTTT  201 (326)
T ss_pred             CCCCEEEEECCcHHHHHHHHHHHhhCCceEEEEECCCHHHHHHHHHHHHhhcCceEE-EeCCHH---HHhh-CCEEEEec
Confidence            456789999999999988887764 566 6666777777777766655    32211 122222   2223 89999999


Q ss_pred             CCcccHHHHHhccccCCEEEEecCCCC-CcccChH
Q 018067          256 SAVHPLMPLIGLLKSQGKLVLVGAPEK-PLELPAF  289 (361)
Q Consensus       256 g~~~~~~~~~~~l~~~G~~v~~g~~~~-~~~~~~~  289 (361)
                      .+.. .-...+.++++-.+..+|.... ..+++..
T Consensus       202 ps~~-P~~~~~~l~~g~hV~~iGs~~p~~~El~~~  235 (326)
T PRK06046        202 PSRK-PVVKAEWIKEGTHINAIGADAPGKQELDPE  235 (326)
T ss_pred             CCCC-cEecHHHcCCCCEEEecCCCCCccccCCHH
Confidence            8755 2234456789889999997643 3455544

>PRK08690 enoyl-(acyl carrier protein) reductase; Provisional

Probab=95.47  E-value=0.077  Score=47.34  Aligned_cols=75  Identities=12%  Similarity=0.240  Sum_probs=49.2

Q ss_pred             CCCEEEEEcC---ChHHHHHHHHHHHcCCeEEEEeCCc---hhHHHHHHHcCCC--EEecCCCHHHHHHh-------cCC
Q 018067          183 PGMHVGVVGL---GGLGHVAVKFAKAMGVKVTVISTSP---SKKSEAIERLGAD--SFLVSRDQDEMQAA-------MGT  247 (361)
Q Consensus       183 ~g~~vlV~Ga---g~vG~~a~~la~~~g~~vi~~~~~~---~~~~~~~~~~g~~--~vv~~~~~~~~~~~-------~~g  247 (361)
                      .++++||.|+   +++|.+.++.+...|++|+++.+.+   +...++.++.+..  ...|-.+++.+..+       .++
T Consensus         5 ~~k~~lITGa~~~~GIG~a~a~~l~~~G~~v~~~~~~~~~~~~~~~~~~~~~~~~~~~~Dv~~~~~v~~~~~~~~~~~g~   84 (261)
T PRK08690          5 QGKKILITGMISERSIAYGIAKACREQGAELAFTYVVDKLEERVRKMAAELDSELVFRCDVASDDEINQVFADLGKHWDG   84 (261)
T ss_pred             CCcEEEEECCCCCCcHHHHHHHHHHHCCCEEEEEcCcHHHHHHHHHHHhccCCceEEECCCCCHHHHHHHHHHHHHHhCC
Confidence            5678999984   5899999999999999999876543   2223333333422  22345554433322       247


Q ss_pred             ccEEEEcCCC
Q 018067          248 MDGIIDTVSA  257 (361)
Q Consensus       248 ~d~vid~~g~  257 (361)
                      +|++|+++|.
T Consensus        85 iD~lVnnAG~   94 (261)
T PRK08690         85 LDGLVHSIGF   94 (261)
T ss_pred             CcEEEECCcc
Confidence            9999999875

>PRK08945 putative oxoacyl-(acyl carrier protein) reductase; Provisional

Probab=95.46  E-value=0.082  Score=46.58  Aligned_cols=77  Identities=18%  Similarity=0.283  Sum_probs=51.9

Q ss_pred             CCCCCEEEEEcC-ChHHHHHHHHHHHcCCeEEEEeCCchhHHHHHHHc---CCC--EE--ecCC--CHHHHH-------H
Q 018067          181 DKPGMHVGVVGL-GGLGHVAVKFAKAMGVKVTVISTSPSKKSEAIERL---GAD--SF--LVSR--DQDEMQ-------A  243 (361)
Q Consensus       181 ~~~g~~vlV~Ga-g~vG~~a~~la~~~g~~vi~~~~~~~~~~~~~~~~---g~~--~v--v~~~--~~~~~~-------~  243 (361)
                      ..++.+++|.|+ |.+|...++.+...|++|++++++.++...+.+++   +..  .+  .+..  +.+.+.       +
T Consensus         9 ~~~~k~vlItG~~g~iG~~la~~l~~~G~~Vi~~~r~~~~~~~~~~~l~~~~~~~~~~~~~d~~~~~~~~~~~~~~~~~~   88 (247)
T PRK08945          9 LLKDRIILVTGAGDGIGREAALTYARHGATVILLGRTEEKLEAVYDEIEAAGGPQPAIIPLDLLTATPQNYQQLADTIEE   88 (247)
T ss_pred             ccCCCEEEEeCCCchHHHHHHHHHHHCCCcEEEEeCCHHHHHHHHHHHHhcCCCCceEEEecccCCCHHHHHHHHHHHHH
Confidence            457889999997 99999999999889999999999876654443332   221  11  2222  222222       2


Q ss_pred             hcCCccEEEEcCCC
Q 018067          244 AMGTMDGIIDTVSA  257 (361)
Q Consensus       244 ~~~g~d~vid~~g~  257 (361)
                      ..+.+|++|.++|.
T Consensus        89 ~~~~id~vi~~Ag~  102 (247)
T PRK08945         89 QFGRLDGVLHNAGL  102 (247)
T ss_pred             HhCCCCEEEECCcc
Confidence            22479999998874

>PRK14185 bifunctional 5,10-methylene-tetrahydrofolate dehydrogenase/ 5,10-methylene-tetrahydrofolate cyclohydrolase; Provisional

Probab=95.44  E-value=0.14  Score=46.11  Aligned_cols=96  Identities=16%  Similarity=0.171  Sum_probs=72.8

Q ss_pred             cccchhhhhhhhHhhhcCCCCCCCEEEEEcC-ChHHHHHHHHHHHc----CCeEEEEeCCchhHHHHHHHcCCCEEecCC
Q 018067          162 APLLCAGITVYSPLRFYGLDKPGMHVGVVGL-GGLGHVAVKFAKAM----GVKVTVISTSPSKKSEAIERLGADSFLVSR  236 (361)
Q Consensus       162 a~l~~~~~ta~~~l~~~~~~~~g~~vlV~Ga-g~vG~~a~~la~~~----g~~vi~~~~~~~~~~~~~~~~g~~~vv~~~  236 (361)
                      ...||+..+....++...---.|++|+|+|. ..+|.=.+.++...    ++.|++..+.....                
T Consensus       135 ~~~PcTp~av~~lL~~~~i~l~GK~vvViGrS~iVGkPla~lL~~~~~~~~aTVtvchs~T~nl----------------  198 (293)
T PRK14185        135 CFVSATPNGILELLKRYHIETSGKKCVVLGRSNIVGKPMAQLMMQKAYPGDCTVTVCHSRSKNL----------------  198 (293)
T ss_pred             CCCCCCHHHHHHHHHHhCCCCCCCEEEEECCCccchHHHHHHHHcCCCCCCCEEEEecCCCCCH----------------
Confidence            3567777777887877764458999999996 88999999999877    68887765543222                


Q ss_pred             CHHHHHHhcCCccEEEEcCCCcccHHHHHhccccCCEEEEecCC
Q 018067          237 DQDEMQAAMGTMDGIIDTVSAVHPLMPLIGLLKSQGKLVLVGAP  280 (361)
Q Consensus       237 ~~~~~~~~~~g~d~vid~~g~~~~~~~~~~~l~~~G~~v~~g~~  280 (361)
                           .+.+..+|+++-++|.+..+  -.+++++|..++.+|..
T Consensus       199 -----~~~~~~ADIvIsAvGkp~~i--~~~~vk~gavVIDvGin  235 (293)
T PRK14185        199 -----KKECLEADIIIAALGQPEFV--KADMVKEGAVVIDVGTT  235 (293)
T ss_pred             -----HHHHhhCCEEEEccCCcCcc--CHHHcCCCCEEEEecCc
Confidence                 23334589999999998843  35789999999999974

>PRK14618 NAD(P)H-dependent glycerol-3-phosphate dehydrogenase; Provisional

Probab=95.43  E-value=0.092  Score=48.67  Aligned_cols=90  Identities=21%  Similarity=0.239  Sum_probs=63.8

Q ss_pred             CEEEEEcCChHHHHHHHHHHHcCCeEEEEeCCchhHHHHHHHc-------CCC---EEecCCCHHHHHHhcCCccEEEEc
Q 018067          185 MHVGVVGLGGLGHVAVKFAKAMGVKVTVISTSPSKKSEAIERL-------GAD---SFLVSRDQDEMQAAMGTMDGIIDT  254 (361)
Q Consensus       185 ~~vlV~Gag~vG~~a~~la~~~g~~vi~~~~~~~~~~~~~~~~-------g~~---~vv~~~~~~~~~~~~~g~d~vid~  254 (361)
                      -+|.|+|+|.+|.+.+..+...|.+|++.++++++.+.+.+..       |..   .+....+   ..+....+|+||-+
T Consensus         5 m~I~iIG~G~mG~~ia~~L~~~G~~V~~~~r~~~~~~~i~~~~~~~~~~~g~~~~~~~~~~~~---~~e~~~~aD~Vi~~   81 (328)
T PRK14618          5 MRVAVLGAGAWGTALAVLAASKGVPVRLWARRPEFAAALAAERENREYLPGVALPAELYPTAD---PEEALAGADFAVVA   81 (328)
T ss_pred             CeEEEECcCHHHHHHHHHHHHCCCeEEEEeCCHHHHHHHHHhCcccccCCCCcCCCCeEEeCC---HHHHHcCCCEEEEE
Confidence            3699999999999999999888999999999877666664321       210   0111112   22333578999999


Q ss_pred             CCCcccHHHHHhccccCCEEEEec
Q 018067          255 VSAVHPLMPLIGLLKSQGKLVLVG  278 (361)
Q Consensus       255 ~g~~~~~~~~~~~l~~~G~~v~~g  278 (361)
                      +.... +...++.++++-.++.+.
T Consensus        82 v~~~~-~~~v~~~l~~~~~vi~~~  104 (328)
T PRK14618         82 VPSKA-LRETLAGLPRALGYVSCA  104 (328)
T ss_pred             CchHH-HHHHHHhcCcCCEEEEEe
Confidence            99887 777878888877777664

>PRK08219 short chain dehydrogenase; Provisional

Probab=95.42  E-value=0.11  Score=44.84  Aligned_cols=72  Identities=14%  Similarity=0.157  Sum_probs=50.7

Q ss_pred             CEEEEEcC-ChHHHHHHHHHHHcCCeEEEEeCCchhHHHHHHHcC-CC-EEecCCCHHHHHHhcC---CccEEEEcCCC
Q 018067          185 MHVGVVGL-GGLGHVAVKFAKAMGVKVTVISTSPSKKSEAIERLG-AD-SFLVSRDQDEMQAAMG---TMDGIIDTVSA  257 (361)
Q Consensus       185 ~~vlV~Ga-g~vG~~a~~la~~~g~~vi~~~~~~~~~~~~~~~~g-~~-~vv~~~~~~~~~~~~~---g~d~vid~~g~  257 (361)
                      .++||.|+ |.+|...+..+... .+|++++++.++...+.+... .. ...|..+.+.+.++..   +.|.+|.++|.
T Consensus         4 ~~vlVtG~~g~iG~~l~~~l~~~-~~V~~~~r~~~~~~~~~~~~~~~~~~~~D~~~~~~~~~~~~~~~~id~vi~~ag~   81 (227)
T PRK08219          4 PTALITGASRGIGAAIARELAPT-HTLLLGGRPAERLDELAAELPGATPFPVDLTDPEAIAAAVEQLGRLDVLVHNAGV   81 (227)
T ss_pred             CEEEEecCCcHHHHHHHHHHHhh-CCEEEEeCCHHHHHHHHHHhccceEEecCCCCHHHHHHHHHhcCCCCEEEECCCc
Confidence            57999987 99999998877777 999999998776555543332 22 1234455555554432   69999999885

>PLN02520 bifunctional 3-dehydroquinate dehydratase/shikimate dehydrogenase

Probab=95.40  E-value=0.082  Score=52.29  Aligned_cols=94  Identities=19%  Similarity=0.110  Sum_probs=62.8

Q ss_pred             CCCEEEEEcCChHHHHHHHHHHHcCCeEEEEeCCchhHHHHHHHcCCCEEecCCCHHHHHHhcCCccEEEEcCCCccc--
Q 018067          183 PGMHVGVVGLGGLGHVAVKFAKAMGVKVTVISTSPSKKSEAIERLGADSFLVSRDQDEMQAAMGTMDGIIDTVSAVHP--  260 (361)
Q Consensus       183 ~g~~vlV~Gag~vG~~a~~la~~~g~~vi~~~~~~~~~~~~~~~~g~~~vv~~~~~~~~~~~~~g~d~vid~~g~~~~--  260 (361)
                      .+++++|+|+|++|.+++..+...|++|+++.++.++.+.+++.++... +...+  .........|+++++++-...  
T Consensus       378 ~~k~vlIlGaGGagrAia~~L~~~G~~V~i~nR~~e~a~~la~~l~~~~-~~~~~--~~~~~~~~~diiINtT~vGm~~~  454 (529)
T PLN02520        378 AGKLFVVIGAGGAGKALAYGAKEKGARVVIANRTYERAKELADAVGGQA-LTLAD--LENFHPEEGMILANTTSVGMQPN  454 (529)
T ss_pred             CCCEEEEECCcHHHHHHHHHHHHCCCEEEEEcCCHHHHHHHHHHhCCce-eeHhH--hhhhccccCeEEEecccCCCCCC
Confidence            4678999999999999999999999999999998888888877775432 22211  111122357899988753220  


Q ss_pred             ---HHHHHhccccCCEEEEecC
Q 018067          261 ---LMPLIGLLKSQGKLVLVGA  279 (361)
Q Consensus       261 ---~~~~~~~l~~~G~~v~~g~  279 (361)
                         .......+++.+.++++-.
T Consensus       455 ~~~~pl~~~~l~~~~~v~D~vY  476 (529)
T PLN02520        455 VDETPISKHALKHYSLVFDAVY  476 (529)
T ss_pred             CCCCcccHhhCCCCCEEEEecc
Confidence               0112345666666666654

>PRK07856 short chain dehydrogenase; Provisional

Probab=95.38  E-value=0.066  Score=47.38  Aligned_cols=70  Identities=24%  Similarity=0.297  Sum_probs=49.3

Q ss_pred             CCCEEEEEcC-ChHHHHHHHHHHHcCCeEEEEeCCchhHHHHHHHcCC--C-EEecCCCHHHHHHh-------cCCccEE
Q 018067          183 PGMHVGVVGL-GGLGHVAVKFAKAMGVKVTVISTSPSKKSEAIERLGA--D-SFLVSRDQDEMQAA-------MGTMDGI  251 (361)
Q Consensus       183 ~g~~vlV~Ga-g~vG~~a~~la~~~g~~vi~~~~~~~~~~~~~~~~g~--~-~vv~~~~~~~~~~~-------~~g~d~v  251 (361)
                      .++++||.|+ |++|..+++.+...|++|++++++.++     +..+.  . ...|..+++.+.++       .+.+|++
T Consensus         5 ~~k~~lItGas~gIG~~la~~l~~~g~~v~~~~r~~~~-----~~~~~~~~~~~~D~~~~~~~~~~~~~~~~~~~~id~v   79 (252)
T PRK07856          5 TGRVVLVTGGTRGIGAGIARAFLAAGATVVVCGRRAPE-----TVDGRPAEFHAADVRDPDQVAALVDAIVERHGRLDVL   79 (252)
T ss_pred             CCCEEEEeCCCchHHHHHHHHHHHCCCEEEEEeCChhh-----hhcCCceEEEEccCCCHHHHHHHHHHHHHHcCCCCEE
Confidence            5788999997 999999999999999999999887654     11222  1 12344554433322       2468999


Q ss_pred             EEcCCC
Q 018067          252 IDTVSA  257 (361)
Q Consensus       252 id~~g~  257 (361)
                      |.++|.
T Consensus        80 i~~ag~   85 (252)
T PRK07856         80 VNNAGG   85 (252)
T ss_pred             EECCCC
Confidence            999874

>PRK12938 acetyacetyl-CoA reductase; Provisional

Probab=95.38  E-value=0.12  Score=45.51  Aligned_cols=75  Identities=24%  Similarity=0.288  Sum_probs=49.0

Q ss_pred             CCCEEEEEcC-ChHHHHHHHHHHHcCCeEEEEeCC-chhHHHHHH---HcCCCEE---ecCCCHHHHHHh-------cCC
Q 018067          183 PGMHVGVVGL-GGLGHVAVKFAKAMGVKVTVISTS-PSKKSEAIE---RLGADSF---LVSRDQDEMQAA-------MGT  247 (361)
Q Consensus       183 ~g~~vlV~Ga-g~vG~~a~~la~~~g~~vi~~~~~-~~~~~~~~~---~~g~~~v---v~~~~~~~~~~~-------~~g  247 (361)
                      +++++||.|+ |.+|..+++.+...|++|++..+. ..+.....+   ..+....   .|..+.+.+.+.       .++
T Consensus         2 ~~k~~lVtG~s~giG~~~a~~l~~~G~~vv~~~~~~~~~~~~~~~~~~~~~~~~~~~~~D~~~~~~~~~~~~~~~~~~~~   81 (246)
T PRK12938          2 SQRIAYVTGGMGGIGTSICQRLHKDGFKVVAGCGPNSPRRVKWLEDQKALGFDFIASEGNVGDWDSTKAAFDKVKAEVGE   81 (246)
T ss_pred             CCCEEEEECCCChHHHHHHHHHHHcCCEEEEEcCCChHHHHHHHHHHHhcCCcEEEEEcCCCCHHHHHHHHHHHHHHhCC
Confidence            3678999997 999999999999999998875543 333222222   2344322   345554433322       247


Q ss_pred             ccEEEEcCCC
Q 018067          248 MDGIIDTVSA  257 (361)
Q Consensus       248 ~d~vid~~g~  257 (361)
                      +|++|+++|.
T Consensus        82 id~li~~ag~   91 (246)
T PRK12938         82 IDVLVNNAGI   91 (246)
T ss_pred             CCEEEECCCC
Confidence            9999999985

>COG0569 TrkA K+ transport systems, NAD-binding component [Inorganic ion transport and metabolism]

Probab=95.37  E-value=0.12  Score=45.03  Aligned_cols=74  Identities=16%  Similarity=0.273  Sum_probs=58.8

Q ss_pred             EEEEEcCChHHHHHHHHHHHcCCeEEEEeCCchhHHHHHH-HcCCCEE-ecCCCHHHHHHhc-CCccEEEEcCCCcc
Q 018067          186 HVGVVGLGGLGHVAVKFAKAMGVKVTVISTSPSKKSEAIE-RLGADSF-LVSRDQDEMQAAM-GTMDGIIDTVSAVH  259 (361)
Q Consensus       186 ~vlV~Gag~vG~~a~~la~~~g~~vi~~~~~~~~~~~~~~-~~g~~~v-v~~~~~~~~~~~~-~g~d~vid~~g~~~  259 (361)
                      +++|+|+|.+|...++.+...|..|+++++++++..+... ++....+ .+..+++.++++. ..+|+++-++|...
T Consensus         2 ~iiIiG~G~vG~~va~~L~~~g~~Vv~Id~d~~~~~~~~~~~~~~~~v~gd~t~~~~L~~agi~~aD~vva~t~~d~   78 (225)
T COG0569           2 KIIIIGAGRVGRSVARELSEEGHNVVLIDRDEERVEEFLADELDTHVVIGDATDEDVLEEAGIDDADAVVAATGNDE   78 (225)
T ss_pred             EEEEECCcHHHHHHHHHHHhCCCceEEEEcCHHHHHHHhhhhcceEEEEecCCCHHHHHhcCCCcCCEEEEeeCCCH
Confidence            5889999999999999999999999999999988777433 4554433 3555677777764 58999999999865

>PLN02657 3,8-divinyl protochlorophyllide a 8-vinyl reductase

Probab=95.37  E-value=0.11  Score=49.40  Aligned_cols=100  Identities=20%  Similarity=0.263  Sum_probs=64.3

Q ss_pred             CCCCCEEEEEcC-ChHHHHHHHHHHHcCCeEEEEeCCchhHH------HHHHHc-CCCE-EecCCCHHHHHHhcC----C
Q 018067          181 DKPGMHVGVVGL-GGLGHVAVKFAKAMGVKVTVISTSPSKKS------EAIERL-GADS-FLVSRDQDEMQAAMG----T  247 (361)
Q Consensus       181 ~~~g~~vlV~Ga-g~vG~~a~~la~~~g~~vi~~~~~~~~~~------~~~~~~-g~~~-vv~~~~~~~~~~~~~----g  247 (361)
                      -..+.+|||+|+ |.+|..++..+...|.+|++++++..+..      ...+.. ++.. ..|..+++.+..+..    +
T Consensus        57 ~~~~~kVLVtGatG~IG~~l~~~Ll~~G~~V~~l~R~~~~~~~~~~~~~~~~~~~~v~~v~~Dl~d~~~l~~~~~~~~~~  136 (390)
T PLN02657         57 EPKDVTVLVVGATGYIGKFVVRELVRRGYNVVAVAREKSGIRGKNGKEDTKKELPGAEVVFGDVTDADSLRKVLFSEGDP  136 (390)
T ss_pred             CCCCCEEEEECCCcHHHHHHHHHHHHCCCEEEEEEechhhccccchhhHHhhhcCCceEEEeeCCCHHHHHHHHHHhCCC
Confidence            367789999998 99999999999889999999998764321      111112 2322 235566665555432    6


Q ss_pred             ccEEEEcCCCcc------------cHHHHHhccccC--CEEEEecCC
Q 018067          248 MDGIIDTVSAVH------------PLMPLIGLLKSQ--GKLVLVGAP  280 (361)
Q Consensus       248 ~d~vid~~g~~~------------~~~~~~~~l~~~--G~~v~~g~~  280 (361)
                      +|+||+|++...            .....++.++..  +++|.++..
T Consensus       137 ~D~Vi~~aa~~~~~~~~~~~vn~~~~~~ll~aa~~~gv~r~V~iSS~  183 (390)
T PLN02657        137 VDVVVSCLASRTGGVKDSWKIDYQATKNSLDAGREVGAKHFVLLSAI  183 (390)
T ss_pred             CcEEEECCccCCCCCccchhhHHHHHHHHHHHHHHcCCCEEEEEeec
Confidence            999999987421            012334444333  478887753

>PRK01438 murD UDP-N-acetylmuramoyl-L-alanyl-D-glutamate synthetase; Provisional

Probab=95.36  E-value=0.16  Score=49.72  Aligned_cols=71  Identities=25%  Similarity=0.295  Sum_probs=49.2

Q ss_pred             CCCCEEEEEcCChHHHHHHHHHHHcCCeEEEEeCCchh----HHHHHHHcCCCEEecCCCHHHHHHhcCCccEEEEcCCC
Q 018067          182 KPGMHVGVVGLGGLGHVAVKFAKAMGVKVTVISTSPSK----KSEAIERLGADSFLVSRDQDEMQAAMGTMDGIIDTVSA  257 (361)
Q Consensus       182 ~~g~~vlV~Gag~vG~~a~~la~~~g~~vi~~~~~~~~----~~~~~~~~g~~~vv~~~~~~~~~~~~~g~d~vid~~g~  257 (361)
                      ..+++|+|+|+|.+|+.++.+++..|.+|++++..+..    .....++.|......... .    ...++|.|+-+.|-
T Consensus        14 ~~~~~v~viG~G~~G~~~A~~L~~~G~~V~~~d~~~~~~~~~~~~~l~~~gv~~~~~~~~-~----~~~~~D~Vv~s~Gi   88 (480)
T PRK01438         14 WQGLRVVVAGLGVSGFAAADALLELGARVTVVDDGDDERHRALAAILEALGATVRLGPGP-T----LPEDTDLVVTSPGW   88 (480)
T ss_pred             cCCCEEEEECCCHHHHHHHHHHHHCCCEEEEEeCCchhhhHHHHHHHHHcCCEEEECCCc-c----ccCCCCEEEECCCc
Confidence            35678999999999999999999999999998865431    112234567654332221 1    23468888888875

>PRK14184 bifunctional 5,10-methylene-tetrahydrofolate dehydrogenase/ 5,10-methylene-tetrahydrofolate cyclohydrolase; Provisional

Probab=95.35  E-value=0.14  Score=45.96  Aligned_cols=95  Identities=21%  Similarity=0.222  Sum_probs=72.7

Q ss_pred             ccchhhhhhhhHhhhcCCCCCCCEEEEEcC-ChHHHHHHHHHHH----cCCeEEEEeCCchhHHHHHHHcCCCEEecCCC
Q 018067          163 PLLCAGITVYSPLRFYGLDKPGMHVGVVGL-GGLGHVAVKFAKA----MGVKVTVISTSPSKKSEAIERLGADSFLVSRD  237 (361)
Q Consensus       163 ~l~~~~~ta~~~l~~~~~~~~g~~vlV~Ga-g~vG~~a~~la~~----~g~~vi~~~~~~~~~~~~~~~~g~~~vv~~~~  237 (361)
                      .+||+..+.+..+++..---.|++|+|+|. ..+|.=.+.++..    .+++|+...+....                  
T Consensus       136 ~~PcTp~av~~lL~~~~i~l~Gk~vvViGrS~iVG~Pla~lL~~~~~~~~AtVt~~hs~t~~------------------  197 (286)
T PRK14184        136 FRPCTPAGVMTLLERYGLSPAGKKAVVVGRSNIVGKPLALMLGAPGKFANATVTVCHSRTPD------------------  197 (286)
T ss_pred             CCCCCHHHHHHHHHHhCCCCCCCEEEEECCCccchHHHHHHHhCCcccCCCEEEEEeCCchh------------------
Confidence            467777777888877764458999999996 7899999999988    78999887654322                  


Q ss_pred             HHHHHHhcCCccEEEEcCCCcccHHHHHhccccCCEEEEecCC
Q 018067          238 QDEMQAAMGTMDGIIDTVSAVHPLMPLIGLLKSQGKLVLVGAP  280 (361)
Q Consensus       238 ~~~~~~~~~g~d~vid~~g~~~~~~~~~~~l~~~G~~v~~g~~  280 (361)
                         +.+....+|+++-++|.+..+.  -+.+++|..++.+|..
T Consensus       198 ---l~~~~~~ADIVI~AvG~p~li~--~~~vk~GavVIDVGi~  235 (286)
T PRK14184        198 ---LAEECREADFLFVAIGRPRFVT--ADMVKPGAVVVDVGIN  235 (286)
T ss_pred             ---HHHHHHhCCEEEEecCCCCcCC--HHHcCCCCEEEEeeee
Confidence               2233445899999999987433  4677999999999864

>PRK06997 enoyl-(acyl carrier protein) reductase; Provisional

Probab=95.35  E-value=0.085  Score=47.07  Aligned_cols=75  Identities=16%  Similarity=0.275  Sum_probs=50.3

Q ss_pred             CCCEEEEEcC---ChHHHHHHHHHHHcCCeEEEEeCC---chhHHHHHHHcCCC--EEecCCCHHHHHHh-------cCC
Q 018067          183 PGMHVGVVGL---GGLGHVAVKFAKAMGVKVTVISTS---PSKKSEAIERLGAD--SFLVSRDQDEMQAA-------MGT  247 (361)
Q Consensus       183 ~g~~vlV~Ga---g~vG~~a~~la~~~g~~vi~~~~~---~~~~~~~~~~~g~~--~vv~~~~~~~~~~~-------~~g  247 (361)
                      .++++||.|+   +++|.++++.+...|++|+++.+.   .++...+.++++..  ...|-.+++.+..+       .++
T Consensus         5 ~~k~vlItGas~~~GIG~a~a~~l~~~G~~v~~~~~~~~~~~~~~~~~~~~~~~~~~~~Dv~d~~~v~~~~~~~~~~~g~   84 (260)
T PRK06997          5 AGKRILITGLLSNRSIAYGIAKACKREGAELAFTYVGDRFKDRITEFAAEFGSDLVFPCDVASDEQIDALFASLGQHWDG   84 (260)
T ss_pred             CCcEEEEeCCCCCCcHHHHHHHHHHHCCCeEEEEccchHHHHHHHHHHHhcCCcceeeccCCCHHHHHHHHHHHHHHhCC
Confidence            4788999984   589999999998899999887543   34444444455532  22355555433322       247


Q ss_pred             ccEEEEcCCC
Q 018067          248 MDGIIDTVSA  257 (361)
Q Consensus       248 ~d~vid~~g~  257 (361)
                      +|++|+++|.
T Consensus        85 iD~lvnnAG~   94 (260)
T PRK06997         85 LDGLVHSIGF   94 (260)
T ss_pred             CcEEEEcccc
Confidence            9999999874

>PRK07688 thiamine/molybdopterin biosynthesis ThiF/MoeB-like protein; Validated

Probab=95.34  E-value=0.07  Score=49.61  Aligned_cols=76  Identities=26%  Similarity=0.436  Sum_probs=49.8

Q ss_pred             CCEEEEEcCChHHHHHHHHHHHcCC-eEEEEeCCc---------------------hhHHH---HHHHcCCCE-E--ec-
Q 018067          184 GMHVGVVGLGGLGHVAVKFAKAMGV-KVTVISTSP---------------------SKKSE---AIERLGADS-F--LV-  234 (361)
Q Consensus       184 g~~vlV~Gag~vG~~a~~la~~~g~-~vi~~~~~~---------------------~~~~~---~~~~~g~~~-v--v~-  234 (361)
                      ..+|+|+|+|++|..++..+...|. ++++++...                     .+...   ..+++..+. +  +. 
T Consensus        24 ~~~VlVvG~GglGs~va~~La~aGvg~i~lvD~D~Ve~sNL~RQ~l~~~~dig~g~~Ka~aa~~~l~~inp~v~v~~~~~  103 (339)
T PRK07688         24 EKHVLIIGAGALGTANAEMLVRAGVGKVTIVDRDYVEWSNLQRQQLYTESDVKNNLPKAVAAKKRLEEINSDVRVEAIVQ  103 (339)
T ss_pred             CCcEEEECCCHHHHHHHHHHHHcCCCeEEEEeCCccCHHHcCccccccHHHhcCCCcHHHHHHHHHHHHCCCcEEEEEec
Confidence            4679999999999999999999999 787777652                     11111   112333221 1  11 


Q ss_pred             CCCHHHHHHhcCCccEEEEcCCCcc
Q 018067          235 SRDQDEMQAAMGTMDGIIDTVSAVH  259 (361)
Q Consensus       235 ~~~~~~~~~~~~g~d~vid~~g~~~  259 (361)
                      .-.++.+.++..++|+|+||..+..
T Consensus       104 ~~~~~~~~~~~~~~DlVid~~Dn~~  128 (339)
T PRK07688        104 DVTAEELEELVTGVDLIIDATDNFE  128 (339)
T ss_pred             cCCHHHHHHHHcCCCEEEEcCCCHH
Confidence            1124455566678999999998865

>PRK14193 bifunctional 5,10-methylene-tetrahydrofolate dehydrogenase/ 5,10-methylene-tetrahydrofolate cyclohydrolase; Provisional

Probab=95.33  E-value=0.15  Score=45.84  Aligned_cols=96  Identities=23%  Similarity=0.306  Sum_probs=72.6

Q ss_pred             ccchhhhhhhhHhhhcCCCCCCCEEEEEcC-ChHHHHHHHHHHH--cCCeEEEEeCCchhHHHHHHHcCCCEEecCCCHH
Q 018067          163 PLLCAGITVYSPLRFYGLDKPGMHVGVVGL-GGLGHVAVKFAKA--MGVKVTVISTSPSKKSEAIERLGADSFLVSRDQD  239 (361)
Q Consensus       163 ~l~~~~~ta~~~l~~~~~~~~g~~vlV~Ga-g~vG~~a~~la~~--~g~~vi~~~~~~~~~~~~~~~~g~~~vv~~~~~~  239 (361)
                      .+||+..+.+..++...---.|++++|+|. ..+|.=.+.++..  .+++|++..+....                    
T Consensus       137 ~~PcTp~av~~ll~~~~i~l~Gk~vvViGrS~~VGkPla~lL~~~~~~atVtvchs~T~~--------------------  196 (284)
T PRK14193        137 PLPCTPRGIVHLLRRYDVELAGAHVVVIGRGVTVGRPIGLLLTRRSENATVTLCHTGTRD--------------------  196 (284)
T ss_pred             CCCCCHHHHHHHHHHhCCCCCCCEEEEECCCCcchHHHHHHHhhccCCCEEEEeCCCCCC--------------------
Confidence            467777777887877664357999999997 8899999999987  78989776553222                    


Q ss_pred             HHHHhcCCccEEEEcCCCcccHHHHHhccccCCEEEEecCCC
Q 018067          240 EMQAAMGTMDGIIDTVSAVHPLMPLIGLLKSQGKLVLVGAPE  281 (361)
Q Consensus       240 ~~~~~~~g~d~vid~~g~~~~~~~~~~~l~~~G~~v~~g~~~  281 (361)
                       +.+....+|+++-++|.+..  --.+.+++|..++.+|...
T Consensus       197 -l~~~~k~ADIvV~AvGkp~~--i~~~~ik~GavVIDvGin~  235 (284)
T PRK14193        197 -LAAHTRRADIIVAAAGVAHL--VTADMVKPGAAVLDVGVSR  235 (284)
T ss_pred             -HHHHHHhCCEEEEecCCcCc--cCHHHcCCCCEEEEccccc
Confidence             23334458999999999873  3467889999999999753

>PF01118 Semialdhyde_dh: Semialdehyde dehydrogenase, NAD binding domain; InterPro: IPR000534 The semialdehyde dehydrogenase family is found in N-acetyl-glutamine semialdehyde dehydrogenase (AgrC), which is involved in arginine biosynthesis, and aspartate-semialdehyde dehydrogenase [], an enzyme involved in the biosynthesis of various amino acids from aspartate

Probab=95.32  E-value=0.064  Score=41.81  Aligned_cols=90  Identities=17%  Similarity=0.186  Sum_probs=57.1

Q ss_pred             EEEEEcC-ChHHHHHHHHHHHc-CCeEEEEeCCch-hHHHHHHHcC----C-CEEecCCCHHHHHHhcCCccEEEEcCCC
Q 018067          186 HVGVVGL-GGLGHVAVKFAKAM-GVKVTVISTSPS-KKSEAIERLG----A-DSFLVSRDQDEMQAAMGTMDGIIDTVSA  257 (361)
Q Consensus       186 ~vlV~Ga-g~vG~~a~~la~~~-g~~vi~~~~~~~-~~~~~~~~~g----~-~~vv~~~~~~~~~~~~~g~d~vid~~g~  257 (361)
                      +|.|+|+ |.+|...++++... .++++.+..++. ....+...++    . +..+...+.+.    ...+|+||.|.++
T Consensus         1 rV~IvGAtG~vG~~l~~lL~~hp~~e~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~----~~~~Dvvf~a~~~   76 (121)
T PF01118_consen    1 RVAIVGATGYVGRELLRLLAEHPDFELVALVSSSRSAGKPLSEVFPHPKGFEDLSVEDADPEE----LSDVDVVFLALPH   76 (121)
T ss_dssp             EEEEESTTSHHHHHHHHHHHHTSTEEEEEEEESTTTTTSBHHHTTGGGTTTEEEBEEETSGHH----HTTESEEEE-SCH
T ss_pred             CEEEECCCCHHHHHHHHHHhcCCCccEEEeeeeccccCCeeehhccccccccceeEeecchhH----hhcCCEEEecCch
Confidence            5889997 99999999999875 456555555444 3333323332    2 22222212121    2689999999999


Q ss_pred             cccHHHHHhccccCCEEEEecC
Q 018067          258 VHPLMPLIGLLKSQGKLVLVGA  279 (361)
Q Consensus       258 ~~~~~~~~~~l~~~G~~v~~g~  279 (361)
                      ....+..-..++.+-+++..+.
T Consensus        77 ~~~~~~~~~~~~~g~~ViD~s~   98 (121)
T PF01118_consen   77 GASKELAPKLLKAGIKVIDLSG   98 (121)
T ss_dssp             HHHHHHHHHHHHTTSEEEESSS
T ss_pred             hHHHHHHHHHhhCCcEEEeCCH
Confidence            8755566666788888998865

This family is also found in yeast and fungal Arg5,6 protein, which is cleaved into the enzymes N-acety-gamma-glutamyl-phosphate reductase and acetylglutamate kinase. These are also involved in arginine biosynthesis. All proteins in this entry contain a NAD binding region of semialdehyde dehydrogenase.; GO: 0016620 oxidoreductase activity, acting on the aldehyde or oxo group of donors, NAD or NADP as acceptor, 0051287 NAD binding, 0006520 cellular amino acid metabolic process, 0055114 oxidation-reduction process, 0005737 cytoplasm; PDB: 3Q0E_B 1MB4_A 3PZR_A 1MC4_A 3TZ6_A 3VOS_A 2CVO_B 2R00_C 2QZ9_A 2EP5_C ....

>PRK14182 bifunctional 5,10-methylene-tetrahydrofolate dehydrogenase/ 5,10-methylene-tetrahydrofolate cyclohydrolase; Provisional

Probab=95.32  E-value=0.17  Score=45.43  Aligned_cols=95  Identities=18%  Similarity=0.212  Sum_probs=72.3

Q ss_pred             ccchhhhhhhhHhhhcCCCCCCCEEEEEcC-ChHHHHHHHHHHHcCCeEEEEeCCchhHHHHHHHcCCCEEecCCCHHHH
Q 018067          163 PLLCAGITVYSPLRFYGLDKPGMHVGVVGL-GGLGHVAVKFAKAMGVKVTVISTSPSKKSEAIERLGADSFLVSRDQDEM  241 (361)
Q Consensus       163 ~l~~~~~ta~~~l~~~~~~~~g~~vlV~Ga-g~vG~~a~~la~~~g~~vi~~~~~~~~~~~~~~~~g~~~vv~~~~~~~~  241 (361)
                      .+||+..+....++...---.|++|+|+|. ..+|.=.+.++...+++|++..+....                     +
T Consensus       136 ~~PcTp~avi~ll~~~~i~l~Gk~vvViGrS~iVGkPla~lL~~~~AtVtichs~T~n---------------------l  194 (282)
T PRK14182        136 PRPCTPAGVMRMLDEARVDPKGKRALVVGRSNIVGKPMAMMLLERHATVTIAHSRTAD---------------------L  194 (282)
T ss_pred             CCCCCHHHHHHHHHHhCCCCCCCEEEEECCCCcchHHHHHHHHHCCCEEEEeCCCCCC---------------------H
Confidence            467777777777776664458999999996 889999999999999999876543322                     2


Q ss_pred             HHhcCCccEEEEcCCCcccHHHHHhccccCCEEEEecCC
Q 018067          242 QAAMGTMDGIIDTVSAVHPLMPLIGLLKSQGKLVLVGAP  280 (361)
Q Consensus       242 ~~~~~g~d~vid~~g~~~~~~~~~~~l~~~G~~v~~g~~  280 (361)
                      .+.+..+|+++-++|.+..+  --+.+++|..++.+|..
T Consensus       195 ~~~~~~ADIvI~AvGk~~~i--~~~~ik~gaiVIDvGin  231 (282)
T PRK14182        195 AGEVGRADILVAAIGKAELV--KGAWVKEGAVVIDVGMN  231 (282)
T ss_pred             HHHHhhCCEEEEecCCcCcc--CHHHcCCCCEEEEeece
Confidence            23344689999999987633  35678999999999964

>KOG1199 consensus Short-chain alcohol dehydrogenase/3-hydroxyacyl-CoA dehydrogenase [Secondary metabolites biosynthesis, transport and catabolism]

Probab=95.32  E-value=0.1  Score=42.72  Aligned_cols=76  Identities=22%  Similarity=0.451  Sum_probs=58.5

Q ss_pred             CCCEEEEEc-CChHHHHHHHHHHHcCCeEEEEeCCchhHHHHHHHcCCCEEecCCC---HHHHHH----h---cCCccEE
Q 018067          183 PGMHVGVVG-LGGLGHVAVKFAKAMGVKVTVISTSPSKKSEAIERLGADSFLVSRD---QDEMQA----A---MGTMDGI  251 (361)
Q Consensus       183 ~g~~vlV~G-ag~vG~~a~~la~~~g~~vi~~~~~~~~~~~~~~~~g~~~vv~~~~---~~~~~~----~---~~g~d~v  251 (361)
                      +|-..||.| ++++|.+++..+...|+.|++.+-...+-...++++|.+.++.+.+   +..++.    .   -+..|..
T Consensus         8 kglvalvtggasglg~ataerlakqgasv~lldlp~skg~~vakelg~~~vf~padvtsekdv~aala~ak~kfgrld~~   87 (260)
T KOG1199|consen    8 KGLVALVTGGASGLGKATAERLAKQGASVALLDLPQSKGADVAKELGGKVVFTPADVTSEKDVRAALAKAKAKFGRLDAL   87 (260)
T ss_pred             cCeeEEeecCcccccHHHHHHHHhcCceEEEEeCCcccchHHHHHhCCceEEeccccCcHHHHHHHHHHHHhhccceeee
Confidence            455667776 5999999999999999999999998888888999999877776544   222221    1   2468999


Q ss_pred             EEcCCCc
Q 018067          252 IDTVSAV  258 (361)
Q Consensus       252 id~~g~~  258 (361)
                      ++|+|..
T Consensus        88 vncagia   94 (260)
T KOG1199|consen   88 VNCAGIA   94 (260)
T ss_pred             eecccee
Confidence            9999953

>PRK05557 fabG 3-ketoacyl-(acyl-carrier-protein) reductase; Validated

Probab=95.31  E-value=0.16  Score=44.45  Aligned_cols=75  Identities=20%  Similarity=0.322  Sum_probs=49.5

Q ss_pred             CCCEEEEEcC-ChHHHHHHHHHHHcCCeEEEEeCCchh-HHHHHHH---cCCCE-Ee--cCCCHHHHHHh-------cCC
Q 018067          183 PGMHVGVVGL-GGLGHVAVKFAKAMGVKVTVISTSPSK-KSEAIER---LGADS-FL--VSRDQDEMQAA-------MGT  247 (361)
Q Consensus       183 ~g~~vlV~Ga-g~vG~~a~~la~~~g~~vi~~~~~~~~-~~~~~~~---~g~~~-vv--~~~~~~~~~~~-------~~g  247 (361)
                      .+.++||.|+ |.+|...+..+...|++|+++.++.++ .....+.   .+... .+  |..+.+.+.++       ..+
T Consensus         4 ~~~~vlItG~sg~iG~~l~~~l~~~G~~v~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~Dl~~~~~~~~~~~~~~~~~~~   83 (248)
T PRK05557          4 EGKVALVTGASRGIGRAIAERLAAQGANVVINYASSEAGAEALVAEIGALGGKALAVQGDVSDAESVERAVDEAKAEFGG   83 (248)
T ss_pred             CCCEEEEECCCchHHHHHHHHHHHCCCEEEEEeCCchhHHHHHHHHHHhcCCceEEEEcCCCCHHHHHHHHHHHHHHcCC
Confidence            4568999997 999999999999999999888776543 2222222   23221 22  55555433322       136


Q ss_pred             ccEEEEcCCC
Q 018067          248 MDGIIDTVSA  257 (361)
Q Consensus       248 ~d~vid~~g~  257 (361)
                      +|.+|.++|.
T Consensus        84 id~vi~~ag~   93 (248)
T PRK05557         84 VDILVNNAGI   93 (248)
T ss_pred             CCEEEECCCc
Confidence            8999999875

>PRK07102 short chain dehydrogenase; Provisional

Probab=95.31  E-value=0.14  Score=44.95  Aligned_cols=73  Identities=14%  Similarity=0.142  Sum_probs=50.5

Q ss_pred             CEEEEEcC-ChHHHHHHHHHHHcCCeEEEEeCCchhHHHHHHHc----CCC-E--EecCCCHHHHHH----hcCCccEEE
Q 018067          185 MHVGVVGL-GGLGHVAVKFAKAMGVKVTVISTSPSKKSEAIERL----GAD-S--FLVSRDQDEMQA----AMGTMDGII  252 (361)
Q Consensus       185 ~~vlV~Ga-g~vG~~a~~la~~~g~~vi~~~~~~~~~~~~~~~~----g~~-~--vv~~~~~~~~~~----~~~g~d~vi  252 (361)
                      ++++|.|+ |.+|...+..+...|++|+++++++++.....+++    +.. .  ..|..+++.+.+    +...+|+++
T Consensus         2 ~~vlItGas~giG~~~a~~l~~~G~~Vi~~~r~~~~~~~~~~~~~~~~~~~~~~~~~Dl~~~~~~~~~~~~~~~~~d~vv   81 (243)
T PRK07102          2 KKILIIGATSDIARACARRYAAAGARLYLAARDVERLERLADDLRARGAVAVSTHELDILDTASHAAFLDSLPALPDIVL   81 (243)
T ss_pred             cEEEEEcCCcHHHHHHHHHHHhcCCEEEEEeCCHHHHHHHHHHHHHhcCCeEEEEecCCCChHHHHHHHHHHhhcCCEEE
Confidence            47899987 99999999999999999999999887665544332    111 1  124444443333    223579999


Q ss_pred             EcCCC
Q 018067          253 DTVSA  257 (361)
Q Consensus       253 d~~g~  257 (361)
                      .++|.
T Consensus        82 ~~ag~   86 (243)
T PRK07102         82 IAVGT   86 (243)
T ss_pred             ECCcC
Confidence            98874

>PRK06114 short chain dehydrogenase; Provisional

Probab=95.30  E-value=0.17  Score=44.85  Aligned_cols=75  Identities=17%  Similarity=0.243  Sum_probs=50.8

Q ss_pred             CCCEEEEEcC-ChHHHHHHHHHHHcCCeEEEEeCCchh-HHHHHHH---cCCC---EEecCCCHHHHHHh-------cCC
Q 018067          183 PGMHVGVVGL-GGLGHVAVKFAKAMGVKVTVISTSPSK-KSEAIER---LGAD---SFLVSRDQDEMQAA-------MGT  247 (361)
Q Consensus       183 ~g~~vlV~Ga-g~vG~~a~~la~~~g~~vi~~~~~~~~-~~~~~~~---~g~~---~vv~~~~~~~~~~~-------~~g  247 (361)
                      .++++||.|+ +++|..+++.+...|++|+++++++++ ...+.++   .+..   ...|..+++.+.++       .+.
T Consensus         7 ~~k~~lVtG~s~gIG~~ia~~l~~~G~~v~~~~r~~~~~~~~~~~~l~~~~~~~~~~~~D~~~~~~i~~~~~~~~~~~g~   86 (254)
T PRK06114          7 DGQVAFVTGAGSGIGQRIAIGLAQAGADVALFDLRTDDGLAETAEHIEAAGRRAIQIAADVTSKADLRAAVARTEAELGA   86 (254)
T ss_pred             CCCEEEEECCCchHHHHHHHHHHHCCCEEEEEeCCcchHHHHHHHHHHhcCCceEEEEcCCCCHHHHHHHHHHHHHHcCC
Confidence            4678999987 999999999999999999999886542 2333222   2322   12244454433322       246


Q ss_pred             ccEEEEcCCC
Q 018067          248 MDGIIDTVSA  257 (361)
Q Consensus       248 ~d~vid~~g~  257 (361)
                      +|++|+++|.
T Consensus        87 id~li~~ag~   96 (254)
T PRK06114         87 LTLAVNAAGI   96 (254)
T ss_pred             CCEEEECCCC
Confidence            8999999985

>PRK06953 short chain dehydrogenase; Provisional

Probab=95.28  E-value=0.099  Score=45.25  Aligned_cols=72  Identities=21%  Similarity=0.257  Sum_probs=51.6

Q ss_pred             CEEEEEcC-ChHHHHHHHHHHHcCCeEEEEeCCchhHHHHHHHcCCC-EEecCCCHHHHHHh----c-CCccEEEEcCCC
Q 018067          185 MHVGVVGL-GGLGHVAVKFAKAMGVKVTVISTSPSKKSEAIERLGAD-SFLVSRDQDEMQAA----M-GTMDGIIDTVSA  257 (361)
Q Consensus       185 ~~vlV~Ga-g~vG~~a~~la~~~g~~vi~~~~~~~~~~~~~~~~g~~-~vv~~~~~~~~~~~----~-~g~d~vid~~g~  257 (361)
                      ++++|.|+ |.+|..+++.+...|++|++++++.+..+++ +..+.. ...|-.+.+.+..+    . .++|++|.++|.
T Consensus         2 ~~vlvtG~sg~iG~~la~~L~~~G~~v~~~~r~~~~~~~~-~~~~~~~~~~D~~~~~~v~~~~~~~~~~~~d~vi~~ag~   80 (222)
T PRK06953          2 KTVLIVGASRGIGREFVRQYRADGWRVIATARDAAALAAL-QALGAEALALDVADPASVAGLAWKLDGEALDAAVYVAGV   80 (222)
T ss_pred             ceEEEEcCCCchhHHHHHHHHhCCCEEEEEECCHHHHHHH-HhccceEEEecCCCHHHHHHHHHHhcCCCCCEEEECCCc
Confidence            46889987 9999999998888899999999887766555 334543 23455555444432    2 269999998875

>PRK09310 aroDE bifunctional 3-dehydroquinate dehydratase/shikimate dehydrogenase protein; Reviewed

Probab=95.28  E-value=0.16  Score=49.65  Aligned_cols=73  Identities=15%  Similarity=0.269  Sum_probs=53.5

Q ss_pred             CCCCEEEEEcCChHHHHHHHHHHHcCCeEEEEeCCchhHHHHHHHcCCCEEecCCCHHHHHHhcCCccEEEEcCCCcc
Q 018067          182 KPGMHVGVVGLGGLGHVAVKFAKAMGVKVTVISTSPSKKSEAIERLGADSFLVSRDQDEMQAAMGTMDGIIDTVSAVH  259 (361)
Q Consensus       182 ~~g~~vlV~Gag~vG~~a~~la~~~g~~vi~~~~~~~~~~~~~~~~g~~~vv~~~~~~~~~~~~~g~d~vid~~g~~~  259 (361)
                      ..+.+++|+|+|++|.+++..+...|+++++..++.++.+.+++.++... ++..+   ... ...+|++|+|+....
T Consensus       330 ~~~k~vlIiGaGgiG~aia~~L~~~G~~V~i~~R~~~~~~~la~~~~~~~-~~~~~---~~~-l~~~DiVInatP~g~  402 (477)
T PRK09310        330 LNNQHVAIVGAGGAAKAIATTLARAGAELLIFNRTKAHAEALASRCQGKA-FPLES---LPE-LHRIDIIINCLPPSV  402 (477)
T ss_pred             cCCCEEEEEcCcHHHHHHHHHHHHCCCEEEEEeCCHHHHHHHHHHhccce-echhH---hcc-cCCCCEEEEcCCCCC
Confidence            35788999999999999999999999999988888877777766654321 22111   111 247999999987654

>PRK14181 bifunctional 5,10-methylene-tetrahydrofolate dehydrogenase/ 5,10-methylene-tetrahydrofolate cyclohydrolase; Provisional

Probab=95.27  E-value=0.17  Score=45.55  Aligned_cols=96  Identities=19%  Similarity=0.292  Sum_probs=72.5

Q ss_pred             cccchhhhhhhhHhhhcCCCCCCCEEEEEcC-ChHHHHHHHHHHHc----CCeEEEEeCCchhHHHHHHHcCCCEEecCC
Q 018067          162 APLLCAGITVYSPLRFYGLDKPGMHVGVVGL-GGLGHVAVKFAKAM----GVKVTVISTSPSKKSEAIERLGADSFLVSR  236 (361)
Q Consensus       162 a~l~~~~~ta~~~l~~~~~~~~g~~vlV~Ga-g~vG~~a~~la~~~----g~~vi~~~~~~~~~~~~~~~~g~~~vv~~~  236 (361)
                      ..+||+..+.+..++...---.|++|+|+|- ..+|.=.+.++...    +++|++..+....                 
T Consensus       131 ~~~PcTp~avi~lL~~~~i~l~Gk~vvViGrS~iVGkPla~lL~~~~~~~~AtVtvchs~T~~-----------------  193 (287)
T PRK14181        131 GFIPCTPAGIIELLKYYEIPLHGRHVAIVGRSNIVGKPLAALLMQKHPDTNATVTLLHSQSEN-----------------  193 (287)
T ss_pred             CCCCCCHHHHHHHHHHhCCCCCCCEEEEECCCccchHHHHHHHHhCcCCCCCEEEEeCCCCCC-----------------
Confidence            3567777777777877764457999999996 78999999999888    7888866543322                 


Q ss_pred             CHHHHHHhcCCccEEEEcCCCcccHHHHHhccccCCEEEEecCC
Q 018067          237 DQDEMQAAMGTMDGIIDTVSAVHPLMPLIGLLKSQGKLVLVGAP  280 (361)
Q Consensus       237 ~~~~~~~~~~g~d~vid~~g~~~~~~~~~~~l~~~G~~v~~g~~  280 (361)
                          +++....+|+++-++|.+..  ---+.+++|..++.+|..
T Consensus       194 ----l~~~~~~ADIvV~AvG~p~~--i~~~~ik~GavVIDvGin  231 (287)
T PRK14181        194 ----LTEILKTADIIIAAIGVPLF--IKEEMIAEKAVIVDVGTS  231 (287)
T ss_pred             ----HHHHHhhCCEEEEccCCcCc--cCHHHcCCCCEEEEeccc
Confidence                23334468999999999873  346788999999999964

>PRK14167 bifunctional 5,10-methylene-tetrahydrofolate dehydrogenase/ 5,10-methylene-tetrahydrofolate cyclohydrolase; Provisional

Probab=95.26  E-value=0.16  Score=45.98  Aligned_cols=95  Identities=19%  Similarity=0.198  Sum_probs=71.5

Q ss_pred             ccchhhhhhhhHhhhcCCCCCCCEEEEEcC-ChHHHHHHHHHHHc----CCeEEEEeCCchhHHHHHHHcCCCEEecCCC
Q 018067          163 PLLCAGITVYSPLRFYGLDKPGMHVGVVGL-GGLGHVAVKFAKAM----GVKVTVISTSPSKKSEAIERLGADSFLVSRD  237 (361)
Q Consensus       163 ~l~~~~~ta~~~l~~~~~~~~g~~vlV~Ga-g~vG~~a~~la~~~----g~~vi~~~~~~~~~~~~~~~~g~~~vv~~~~  237 (361)
                      ..||+..+.+..++...---.|++|+|+|. ..+|.=.+.++...    +++|.+..+....                  
T Consensus       136 ~~PcTp~avi~lL~~~~i~l~Gk~vvViGrS~iVGkPla~lL~~~~~~~~aTVtvchs~T~~------------------  197 (297)
T PRK14167        136 FKPCTPHGIQKLLAAAGVDTEGADVVVVGRSDIVGKPMANLLIQKADGGNATVTVCHSRTDD------------------  197 (297)
T ss_pred             CCCCCHHHHHHHHHHhCCCCCCCEEEEECCCcccHHHHHHHHhcCccCCCCEEEEeCCCCCC------------------
Confidence            457777777777777664468999999996 78999999999876    7888775443322                  


Q ss_pred             HHHHHHhcCCccEEEEcCCCcccHHHHHhccccCCEEEEecCC
Q 018067          238 QDEMQAAMGTMDGIIDTVSAVHPLMPLIGLLKSQGKLVLVGAP  280 (361)
Q Consensus       238 ~~~~~~~~~g~d~vid~~g~~~~~~~~~~~l~~~G~~v~~g~~  280 (361)
                         +.+.+..+|+++-++|.+..+.  -+.+++|..++.+|..
T Consensus       198 ---l~~~~~~ADIvIsAvGkp~~i~--~~~ik~gaiVIDvGin  235 (297)
T PRK14167        198 ---LAAKTRRADIVVAAAGVPELID--GSMLSEGATVIDVGIN  235 (297)
T ss_pred             ---HHHHHhhCCEEEEccCCcCccC--HHHcCCCCEEEEcccc
Confidence               2233456899999999988333  4789999999999964

>TIGR02415 23BDH acetoin reductases

Probab=95.24  E-value=0.097  Score=46.23  Aligned_cols=73  Identities=21%  Similarity=0.267  Sum_probs=50.9

Q ss_pred             CEEEEEcC-ChHHHHHHHHHHHcCCeEEEEeCCchhHHHHHHH---cCCCE---EecCCCHHHHHHh-------cCCccE
Q 018067          185 MHVGVVGL-GGLGHVAVKFAKAMGVKVTVISTSPSKKSEAIER---LGADS---FLVSRDQDEMQAA-------MGTMDG  250 (361)
Q Consensus       185 ~~vlV~Ga-g~vG~~a~~la~~~g~~vi~~~~~~~~~~~~~~~---~g~~~---vv~~~~~~~~~~~-------~~g~d~  250 (361)
                      ++++|.|+ |.+|...++.+...|++|+++.+++++...+.+.   .+...   ..|..+++.+.++       .+++|+
T Consensus         1 k~~lItG~sg~iG~~la~~l~~~G~~v~~~~r~~~~~~~~~~~l~~~~~~~~~~~~Dl~~~~~i~~~~~~~~~~~~~id~   80 (254)
T TIGR02415         1 KVALVTGGAQGIGKGIAERLAKDGFAVAVADLNEETAKETAKEINQAGGKAVAYKLDVSDKDQVFSAIDQAAEKFGGFDV   80 (254)
T ss_pred             CEEEEeCCCchHHHHHHHHHHHCCCEEEEEeCCHHHHHHHHHHHHhcCCeEEEEEcCCCCHHHHHHHHHHHHHHcCCCCE
Confidence            36899997 9999999999999999999999887655444333   23221   2345555544332       236899


Q ss_pred             EEEcCCC
Q 018067          251 IIDTVSA  257 (361)
Q Consensus       251 vid~~g~  257 (361)
                      +|+++|.
T Consensus        81 vi~~ag~   87 (254)
T TIGR02415        81 MVNNAGV   87 (254)
T ss_pred             EEECCCc
Confidence            9999875

One member of this family, as characterized in Klebsiella terrigena, is described as able to interconvert acetoin + NADH with meso-2,3-butanediol + NAD(+). It is also called capable of irreversible reduction of diacetyl with NADH to acetoin. Blomqvist, et al. decline to specify either EC 1.1.1.4 which is (R,R)-butanediol dehydrogenase, or EC 1.1.1.5, which is acetoin dehydrogenase without a specified stereochemistry, for this enzyme. This enzyme is a homotetramer in the family of short chain dehydrogenases (pfam00106). Another member of this family, from Corynebacterium glutamicum, is called L-2,3-butanediol dehydrogenase (PubMed:11577733).

>PRK06407 ornithine cyclodeaminase; Provisional

Probab=95.24  E-value=0.12  Score=47.18  Aligned_cols=104  Identities=17%  Similarity=0.124  Sum_probs=72.5

Q ss_pred             CCCCEEEEEcCChHHHHHHHHHHH-cCC-eEEEEeCCchhHHHHHHHcC----CCEEecCCCHHHHHHhcCCccEEEEcC
Q 018067          182 KPGMHVGVVGLGGLGHVAVKFAKA-MGV-KVTVISTSPSKKSEAIERLG----ADSFLVSRDQDEMQAAMGTMDGIIDTV  255 (361)
Q Consensus       182 ~~g~~vlV~Gag~vG~~a~~la~~-~g~-~vi~~~~~~~~~~~~~~~~g----~~~vv~~~~~~~~~~~~~g~d~vid~~  255 (361)
                      +..+++.|+|+|..+.+.++.+.. +.. +|.+..++.++.+.+++++.    ....+ .   +..++...+.|+|+-++
T Consensus       115 ~da~~l~iiGaG~QA~~~~~a~~~v~~i~~v~v~~r~~~~a~~f~~~~~~~~~~~v~~-~---~~~~eav~~aDIV~taT  190 (301)
T PRK06407        115 KNVENFTIIGSGFQAETQLEGMASVYNPKRIRVYSRNFDHARAFAERFSKEFGVDIRP-V---DNAEAALRDADTITSIT  190 (301)
T ss_pred             cCCcEEEEECCcHHHHHHHHHHHhcCCCCEEEEECCCHHHHHHHHHHHHHhcCCcEEE-e---CCHHHHHhcCCEEEEec
Confidence            456888999999999888877775 455 88999999888777766653    32211 1   12345557899999988


Q ss_pred             CCcccHHHHHhccccCCEEEEecCCCC-CcccChHH
Q 018067          256 SAVHPLMPLIGLLKSQGKLVLVGAPEK-PLELPAFS  290 (361)
Q Consensus       256 g~~~~~~~~~~~l~~~G~~v~~g~~~~-~~~~~~~~  290 (361)
                      ++...+ .-.+.++++-.+..+|.... .-+++..-
T Consensus       191 ~s~~P~-~~~~~l~pg~hV~aiGs~~p~~~El~~~~  225 (301)
T PRK06407        191 NSDTPI-FNRKYLGDEYHVNLAGSNYPNRREAEHSV  225 (301)
T ss_pred             CCCCcE-ecHHHcCCCceEEecCCCCCCcccCCHHH
Confidence            876522 23457899888999998653 34566543

>PRK08644 thiamine biosynthesis protein ThiF; Provisional

Probab=95.21  E-value=0.085  Score=45.57  Aligned_cols=34  Identities=26%  Similarity=0.455  Sum_probs=28.6

Q ss_pred             CCCEEEEEcCChHHHHHHHHHHHcCC-eEEEEeCC
Q 018067          183 PGMHVGVVGLGGLGHVAVKFAKAMGV-KVTVISTS  216 (361)
Q Consensus       183 ~g~~vlV~Gag~vG~~a~~la~~~g~-~vi~~~~~  216 (361)
                      ...+|+|+|+|++|-.+++.+...|. ++++++..
T Consensus        27 ~~~~V~ViG~GglGs~ia~~La~~Gvg~i~lvD~D   61 (212)
T PRK08644         27 KKAKVGIAGAGGLGSNIAVALARSGVGNLKLVDFD   61 (212)
T ss_pred             hCCCEEEECcCHHHHHHHHHHHHcCCCeEEEEeCC
Confidence            34679999999999999999999998 57777665

>PRK14106 murD UDP-N-acetylmuramoyl-L-alanyl-D-glutamate synthetase; Provisional

Probab=95.21  E-value=0.12  Score=50.08  Aligned_cols=72  Identities=25%  Similarity=0.348  Sum_probs=49.7

Q ss_pred             CCCEEEEEcCChHHHHHHHHHHHcCCeEEEEeCCc-hhHHHH---HHHcCCCEEecCCCHHHHHHhcCCccEEEEcCCCc
Q 018067          183 PGMHVGVVGLGGLGHVAVKFAKAMGVKVTVISTSP-SKKSEA---IERLGADSFLVSRDQDEMQAAMGTMDGIIDTVSAV  258 (361)
Q Consensus       183 ~g~~vlV~Gag~vG~~a~~la~~~g~~vi~~~~~~-~~~~~~---~~~~g~~~vv~~~~~~~~~~~~~g~d~vid~~g~~  258 (361)
                      .+++|+|+|+|.+|+.++..+...|++|++++... +...+.   .++.|.+. +..+..+   ...+++|+||.+.|..
T Consensus         4 ~~k~v~iiG~g~~G~~~A~~l~~~G~~V~~~d~~~~~~~~~~~~~l~~~~~~~-~~~~~~~---~~~~~~d~vv~~~g~~   79 (450)
T PRK14106          4 KGKKVLVVGAGVSGLALAKFLKKLGAKVILTDEKEEDQLKEALEELGELGIEL-VLGEYPE---EFLEGVDLVVVSPGVP   79 (450)
T ss_pred             CCCEEEEECCCHHHHHHHHHHHHCCCEEEEEeCCchHHHHHHHHHHHhcCCEE-EeCCcch---hHhhcCCEEEECCCCC
Confidence            46889999998899999999999999999998875 222111   13445542 2222222   2345799999998853

>PRK04148 hypothetical protein; Provisional

Probab=95.21  E-value=0.17  Score=40.09  Aligned_cols=74  Identities=18%  Similarity=0.216  Sum_probs=49.8

Q ss_pred             CCCCEEEEEcCChHHHHHHHHHHHcCCeEEEEeCCchhHHHHHHHcCCCEEecCC-CHHHHHHhcCCccEEEEcCCCcc
Q 018067          182 KPGMHVGVVGLGGLGHVAVKFAKAMGVKVTVISTSPSKKSEAIERLGADSFLVSR-DQDEMQAAMGTMDGIIDTVSAVH  259 (361)
Q Consensus       182 ~~g~~vlV~Gag~vG~~a~~la~~~g~~vi~~~~~~~~~~~~~~~~g~~~vv~~~-~~~~~~~~~~g~d~vid~~g~~~  259 (361)
                      .++.+++++|.| .|...+..+...|.+|++++.+++....+ ++.+.+.+.+.- +++  .++-.++|.++..-..+.
T Consensus        15 ~~~~kileIG~G-fG~~vA~~L~~~G~~ViaIDi~~~aV~~a-~~~~~~~v~dDlf~p~--~~~y~~a~liysirpp~e   89 (134)
T PRK04148         15 GKNKKIVELGIG-FYFKVAKKLKESGFDVIVIDINEKAVEKA-KKLGLNAFVDDLFNPN--LEIYKNAKLIYSIRPPRD   89 (134)
T ss_pred             ccCCEEEEEEec-CCHHHHHHHHHCCCEEEEEECCHHHHHHH-HHhCCeEEECcCCCCC--HHHHhcCCEEEEeCCCHH
Confidence            456889999999 88866777778899999999998876655 566654433211 111  122246777777666655

>PRK00141 murD UDP-N-acetylmuramoyl-L-alanyl-D-glutamate synthetase; Provisional

Probab=95.21  E-value=0.12  Score=50.54  Aligned_cols=72  Identities=17%  Similarity=0.242  Sum_probs=49.3

Q ss_pred             CCCCEEEEEcCChHHHHHHHHHHHcCCeEEEEeCCchhHHHHHHHcCCCEEecCCCHHHHHHhcCCccEEEEcCCC
Q 018067          182 KPGMHVGVVGLGGLGHVAVKFAKAMGVKVTVISTSPSKKSEAIERLGADSFLVSRDQDEMQAAMGTMDGIIDTVSA  257 (361)
Q Consensus       182 ~~g~~vlV~Gag~vG~~a~~la~~~g~~vi~~~~~~~~~~~~~~~~g~~~vv~~~~~~~~~~~~~g~d~vid~~g~  257 (361)
                      -.+++|+|+|.|..|.+++.+++..|++|++.++......++.+++|.......+.++.+    ..+|.||-+.|-
T Consensus        13 ~~~~~v~v~G~G~sG~a~a~~L~~~G~~V~~~D~~~~~~~~~l~~~gi~~~~~~~~~~~~----~~~d~vV~Spgi   84 (473)
T PRK00141         13 ELSGRVLVAGAGVSGRGIAAMLSELGCDVVVADDNETARHKLIEVTGVADISTAEASDQL----DSFSLVVTSPGW   84 (473)
T ss_pred             ccCCeEEEEccCHHHHHHHHHHHHCCCEEEEECCChHHHHHHHHhcCcEEEeCCCchhHh----cCCCEEEeCCCC
Confidence            456679999999999999999999999999988765544444455676543222233322    256777766554

>KOG1502 consensus Flavonol reductase/cinnamoyl-CoA reductase [Defense mechanisms]

Probab=95.20  E-value=0.12  Score=47.24  Aligned_cols=75  Identities=25%  Similarity=0.371  Sum_probs=56.3

Q ss_pred             CCCEEEEEcC-ChHHHHHHHHHHHcCCeEEEEeCCchhHHH--HHHHcC-CC---EEe--cCCCHHHHHHhcCCccEEEE
Q 018067          183 PGMHVGVVGL-GGLGHVAVKFAKAMGVKVTVISTSPSKKSE--AIERLG-AD---SFL--VSRDQDEMQAAMGTMDGIID  253 (361)
Q Consensus       183 ~g~~vlV~Ga-g~vG~~a~~la~~~g~~vi~~~~~~~~~~~--~~~~~g-~~---~vv--~~~~~~~~~~~~~g~d~vid  253 (361)
                      .+.+|+|.|+ |-||...+..+...|++|..++|+++....  ..+++. +.   .++  |-.+++.......|+|.||.
T Consensus         5 ~~~~VcVTGAsGfIgswivk~LL~rGY~V~gtVR~~~~~k~~~~L~~l~~a~~~l~l~~aDL~d~~sf~~ai~gcdgVfH   84 (327)
T KOG1502|consen    5 EGKKVCVTGASGFIGSWIVKLLLSRGYTVRGTVRDPEDEKKTEHLRKLEGAKERLKLFKADLLDEGSFDKAIDGCDGVFH   84 (327)
T ss_pred             CCcEEEEeCCchHHHHHHHHHHHhCCCEEEEEEcCcchhhhHHHHHhcccCcccceEEeccccccchHHHHHhCCCEEEE
Confidence            6788999998 999999999999999999999999876433  235554 22   122  33445666667778999999


Q ss_pred             cCCC
Q 018067          254 TVSA  257 (361)
Q Consensus       254 ~~g~  257 (361)
                      ++.-
T Consensus        85 ~Asp   88 (327)
T KOG1502|consen   85 TASP   88 (327)
T ss_pred             eCcc
Confidence            8753

>PRK08220 2,3-dihydroxybenzoate-2,3-dehydrogenase; Validated

Probab=95.20  E-value=0.21  Score=43.95  Aligned_cols=69  Identities=19%  Similarity=0.203  Sum_probs=48.3

Q ss_pred             CCCEEEEEcC-ChHHHHHHHHHHHcCCeEEEEeCCchhHHHHHHHcCCC---EEecCCCHHHHHHh-------cCCccEE
Q 018067          183 PGMHVGVVGL-GGLGHVAVKFAKAMGVKVTVISTSPSKKSEAIERLGAD---SFLVSRDQDEMQAA-------MGTMDGI  251 (361)
Q Consensus       183 ~g~~vlV~Ga-g~vG~~a~~la~~~g~~vi~~~~~~~~~~~~~~~~g~~---~vv~~~~~~~~~~~-------~~g~d~v  251 (361)
                      .++++||.|+ |.+|...+..+...|++|++++++.     . +..+..   ...|..+++.+.++       .+.+|++
T Consensus         7 ~~k~vlItGas~~iG~~la~~l~~~G~~v~~~~~~~-----~-~~~~~~~~~~~~D~~~~~~~~~~~~~~~~~~~~id~v   80 (252)
T PRK08220          7 SGKTVWVTGAAQGIGYAVALAFVEAGAKVIGFDQAF-----L-TQEDYPFATFVLDVSDAAAVAQVCQRLLAETGPLDVL   80 (252)
T ss_pred             CCCEEEEeCCCchHHHHHHHHHHHCCCEEEEEecch-----h-hhcCCceEEEEecCCCHHHHHHHHHHHHHHcCCCCEE
Confidence            5688999997 9999999999999999999998875     1 122321   12244454433332       2468999


Q ss_pred             EEcCCC
Q 018067          252 IDTVSA  257 (361)
Q Consensus       252 id~~g~  257 (361)
                      |.++|.
T Consensus        81 i~~ag~   86 (252)
T PRK08220         81 VNAAGI   86 (252)
T ss_pred             EECCCc
Confidence            999885

>PRK05855 short chain dehydrogenase; Validated

Probab=95.20  E-value=0.097  Score=52.31  Aligned_cols=75  Identities=23%  Similarity=0.245  Sum_probs=53.9

Q ss_pred             CCCEEEEEcC-ChHHHHHHHHHHHcCCeEEEEeCCchhHHHHHHH---cCCC---EEecCCCHHHHHHh-------cCCc
Q 018067          183 PGMHVGVVGL-GGLGHVAVKFAKAMGVKVTVISTSPSKKSEAIER---LGAD---SFLVSRDQDEMQAA-------MGTM  248 (361)
Q Consensus       183 ~g~~vlV~Ga-g~vG~~a~~la~~~g~~vi~~~~~~~~~~~~~~~---~g~~---~vv~~~~~~~~~~~-------~~g~  248 (361)
                      .+.++||+|+ |++|...++.+...|++|++++++.++.+++.+.   .|..   ...|..+++.+.++       .+.+
T Consensus       314 ~~~~~lv~G~s~giG~~~a~~l~~~G~~v~~~~r~~~~~~~~~~~~~~~~~~~~~~~~Dv~~~~~~~~~~~~~~~~~g~i  393 (582)
T PRK05855        314 SGKLVVVTGAGSGIGRETALAFAREGAEVVASDIDEAAAERTAELIRAAGAVAHAYRVDVSDADAMEAFAEWVRAEHGVP  393 (582)
T ss_pred             CCCEEEEECCcCHHHHHHHHHHHHCCCEEEEEeCCHHHHHHHHHHHHhcCCeEEEEEcCCCCHHHHHHHHHHHHHhcCCC
Confidence            4678999997 9999999999999999999999987766555433   2332   12355555443332       2469


Q ss_pred             cEEEEcCCC
Q 018067          249 DGIIDTVSA  257 (361)
Q Consensus       249 d~vid~~g~  257 (361)
                      |++|+++|.
T Consensus       394 d~lv~~Ag~  402 (582)
T PRK05855        394 DIVVNNAGI  402 (582)
T ss_pred             cEEEECCcc
Confidence            999999985

>PRK14168 bifunctional 5,10-methylene-tetrahydrofolate dehydrogenase/ 5,10-methylene-tetrahydrofolate cyclohydrolase; Provisional

Probab=95.19  E-value=0.17  Score=45.72  Aligned_cols=96  Identities=19%  Similarity=0.207  Sum_probs=72.7

Q ss_pred             cccchhhhhhhhHhhhcCCCCCCCEEEEEcC-ChHHHHHHHHHHHc----CCeEEEEeCCchhHHHHHHHcCCCEEecCC
Q 018067          162 APLLCAGITVYSPLRFYGLDKPGMHVGVVGL-GGLGHVAVKFAKAM----GVKVTVISTSPSKKSEAIERLGADSFLVSR  236 (361)
Q Consensus       162 a~l~~~~~ta~~~l~~~~~~~~g~~vlV~Ga-g~vG~~a~~la~~~----g~~vi~~~~~~~~~~~~~~~~g~~~vv~~~  236 (361)
                      ..+||+..+....++...---.|++|+|+|. ..+|.-.+.++...    +++|++..+....                 
T Consensus       139 ~~~PcTp~avi~lL~~~~i~l~Gk~vvViGrS~iVGkPla~lL~~~~~~~~atVtv~hs~T~~-----------------  201 (297)
T PRK14168        139 KFLPCTPAGIQEMLVRSGVETSGAEVVVVGRSNIVGKPIANMMTQKGPGANATVTIVHTRSKN-----------------  201 (297)
T ss_pred             CCcCCCHHHHHHHHHHhCCCCCCCEEEEECCCCcccHHHHHHHHhcccCCCCEEEEecCCCcC-----------------
Confidence            3567777777887877765468999999996 88999999999887    7888876543221                 


Q ss_pred             CHHHHHHhcCCccEEEEcCCCcccHHHHHhccccCCEEEEecCC
Q 018067          237 DQDEMQAAMGTMDGIIDTVSAVHPLMPLIGLLKSQGKLVLVGAP  280 (361)
Q Consensus       237 ~~~~~~~~~~g~d~vid~~g~~~~~~~~~~~l~~~G~~v~~g~~  280 (361)
                          +.+....+|+++-++|.+..  --.+.+++|..++.+|..
T Consensus       202 ----l~~~~~~ADIvVsAvGkp~~--i~~~~ik~gavVIDvGin  239 (297)
T PRK14168        202 ----LARHCQRADILIVAAGVPNL--VKPEWIKPGATVIDVGVN  239 (297)
T ss_pred             ----HHHHHhhCCEEEEecCCcCc--cCHHHcCCCCEEEecCCC
Confidence                23334568999999999873  336778999999999864

>PRK08642 fabG 3-ketoacyl-(acyl-carrier-protein) reductase; Provisional

Probab=95.19  E-value=0.12  Score=45.55  Aligned_cols=75  Identities=21%  Similarity=0.284  Sum_probs=49.1

Q ss_pred             CCCEEEEEcC-ChHHHHHHHHHHHcCCeEEEEeCC-chhHHHHHHHcCCCE---EecCCCHHHHHHh-------cCC-cc
Q 018067          183 PGMHVGVVGL-GGLGHVAVKFAKAMGVKVTVISTS-PSKKSEAIERLGADS---FLVSRDQDEMQAA-------MGT-MD  249 (361)
Q Consensus       183 ~g~~vlV~Ga-g~vG~~a~~la~~~g~~vi~~~~~-~~~~~~~~~~~g~~~---vv~~~~~~~~~~~-------~~g-~d  249 (361)
                      .+.++||.|+ |.+|..++..+...|++|+++.+. .++...+..+++...   ..|..+++.+..+       .++ +|
T Consensus         4 ~~k~ilItGas~gIG~~la~~l~~~G~~vv~~~~~~~~~~~~~~~~~~~~~~~~~~D~~~~~~~~~~~~~~~~~~g~~id   83 (253)
T PRK08642          4 SEQTVLVTGGSRGLGAAIARAFAREGARVVVNYHQSEDAAEALADELGDRAIALQADVTDREQVQAMFATATEHFGKPIT   83 (253)
T ss_pred             CCCEEEEeCCCCcHHHHHHHHHHHCCCeEEEEcCCCHHHHHHHHHHhCCceEEEEcCCCCHHHHHHHHHHHHHHhCCCCe
Confidence            3568999997 999999999998899999886653 444444444444321   1244444433322       133 99


Q ss_pred             EEEEcCCC
Q 018067          250 GIIDTVSA  257 (361)
Q Consensus       250 ~vid~~g~  257 (361)
                      ++|.++|.
T Consensus        84 ~li~~ag~   91 (253)
T PRK08642         84 TVVNNALA   91 (253)
T ss_pred             EEEECCCc
Confidence            99998863

>PLN02650 dihydroflavonol-4-reductase

Probab=95.18  E-value=0.12  Score=48.21  Aligned_cols=74  Identities=19%  Similarity=0.183  Sum_probs=51.5

Q ss_pred             CCCEEEEEcC-ChHHHHHHHHHHHcCCeEEEEeCCchhHHHHHHHc---CC--C-E--EecCCCHHHHHHhcCCccEEEE
Q 018067          183 PGMHVGVVGL-GGLGHVAVKFAKAMGVKVTVISTSPSKKSEAIERL---GA--D-S--FLVSRDQDEMQAAMGTMDGIID  253 (361)
Q Consensus       183 ~g~~vlV~Ga-g~vG~~a~~la~~~g~~vi~~~~~~~~~~~~~~~~---g~--~-~--vv~~~~~~~~~~~~~g~d~vid  253 (361)
                      ..++|||.|+ |.+|...+..+...|.+|++++++.+....+....   +.  . .  ..|..+.+.+.++..++|+||.
T Consensus         4 ~~k~iLVTGatGfIGs~l~~~L~~~G~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~v~~Dl~d~~~~~~~~~~~d~ViH   83 (351)
T PLN02650          4 QKETVCVTGASGFIGSWLVMRLLERGYTVRATVRDPANVKKVKHLLDLPGATTRLTLWKADLAVEGSFDDAIRGCTGVFH   83 (351)
T ss_pred             CCCEEEEeCCcHHHHHHHHHHHHHCCCEEEEEEcCcchhHHHHHHHhccCCCCceEEEEecCCChhhHHHHHhCCCEEEE
Confidence            4568999997 99999999999999999998888765443332211   21  1 1  1234455556666668999999


Q ss_pred             cCC
Q 018067          254 TVS  256 (361)
Q Consensus       254 ~~g  256 (361)
                      +++
T Consensus        84 ~A~   86 (351)
T PLN02650         84 VAT   86 (351)
T ss_pred             eCC
Confidence            886

>PRK04207 glyceraldehyde-3-phosphate dehydrogenase; Provisional

Probab=95.17  E-value=0.25  Score=46.03  Aligned_cols=91  Identities=15%  Similarity=0.169  Sum_probs=60.0

Q ss_pred             EEEEEcCChHHHHHHHHHHHc-CCeEEEEeCCch-hHHHHHHHcCCCE---------------EecCCCHHHHHHhcCCc
Q 018067          186 HVGVVGLGGLGHVAVKFAKAM-GVKVTVISTSPS-KKSEAIERLGADS---------------FLVSRDQDEMQAAMGTM  248 (361)
Q Consensus       186 ~vlV~Gag~vG~~a~~la~~~-g~~vi~~~~~~~-~~~~~~~~~g~~~---------------vv~~~~~~~~~~~~~g~  248 (361)
                      +|.|+|.|.+|+..++.+... +++++.+..... ....+++.+|.+.               +....+   ...+..++
T Consensus         3 kVaI~G~GrIGr~va~al~~~~d~eLvav~d~~~~~~~~la~~~G~~~~~~~~~~~~~~~~~~i~V~~~---~~el~~~v   79 (341)
T PRK04207          3 KVGVNGYGTIGKRVADAVAAQPDMELVGVAKTKPDYEARVAVEKGYPLYVADPEREKAFEEAGIPVAGT---IEDLLEKA   79 (341)
T ss_pred             EEEEECCCHHHHHHHHHHhcCCCcEEEEEECCChHHHHHHHHhcCCCccccCccccccccCCceEEcCC---hhHhhccC
Confidence            588999999999999887754 668888776443 2333444444321               111111   22233579


Q ss_pred             cEEEEcCCCcccHHHHHhccccCCEEEEecC
Q 018067          249 DGIIDTVSAVHPLMPLIGLLKSQGKLVLVGA  279 (361)
Q Consensus       249 d~vid~~g~~~~~~~~~~~l~~~G~~v~~g~  279 (361)
                      |+||||++.......+..+++.|-.++.-+.
T Consensus        80 DVVIdaT~~~~~~e~a~~~~~aGk~VI~~~~  110 (341)
T PRK04207         80 DIVVDATPGGVGAKNKELYEKAGVKAIFQGG  110 (341)
T ss_pred             CEEEECCCchhhHHHHHHHHHCCCEEEEcCC
Confidence            9999999988766677777777767777665

>PLN02214 cinnamoyl-CoA reductase

Probab=95.17  E-value=0.14  Score=47.66  Aligned_cols=76  Identities=25%  Similarity=0.341  Sum_probs=52.6

Q ss_pred             CCCCEEEEEcC-ChHHHHHHHHHHHcCCeEEEEeCCchhHH-HHHHHc-C--CC-EE--ecCCCHHHHHHhcCCccEEEE
Q 018067          182 KPGMHVGVVGL-GGLGHVAVKFAKAMGVKVTVISTSPSKKS-EAIERL-G--AD-SF--LVSRDQDEMQAAMGTMDGIID  253 (361)
Q Consensus       182 ~~g~~vlV~Ga-g~vG~~a~~la~~~g~~vi~~~~~~~~~~-~~~~~~-g--~~-~v--v~~~~~~~~~~~~~g~d~vid  253 (361)
                      .++.+|||.|+ |.+|...+..+...|.+|++++++.++.. ...+.+ +  .. .+  .|..+.+.+.++..++|+||.
T Consensus         8 ~~~~~vlVTGatGfIG~~l~~~L~~~G~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~Dl~d~~~~~~~~~~~d~Vih   87 (342)
T PLN02214          8 PAGKTVCVTGAGGYIASWIVKILLERGYTVKGTVRNPDDPKNTHLRELEGGKERLILCKADLQDYEALKAAIDGCDGVFH   87 (342)
T ss_pred             CCCCEEEEECCCcHHHHHHHHHHHHCcCEEEEEeCCchhhhHHHHHHhhCCCCcEEEEecCcCChHHHHHHHhcCCEEEE
Confidence            35678999998 99999999999999999999988765321 111122 1  11 11  244455666666678999999


Q ss_pred             cCCC
Q 018067          254 TVSA  257 (361)
Q Consensus       254 ~~g~  257 (361)
                      +++.
T Consensus        88 ~A~~   91 (342)
T PLN02214         88 TASP   91 (342)
T ss_pred             ecCC
Confidence            9874

>PRK08226 short chain dehydrogenase; Provisional

Probab=95.17  E-value=0.16  Score=45.22  Aligned_cols=74  Identities=19%  Similarity=0.323  Sum_probs=50.3

Q ss_pred             CCCEEEEEcC-ChHHHHHHHHHHHcCCeEEEEeCCchhHHHHHHH---cCCC---EEecCCCHHHHHHh-------cCCc
Q 018067          183 PGMHVGVVGL-GGLGHVAVKFAKAMGVKVTVISTSPSKKSEAIER---LGAD---SFLVSRDQDEMQAA-------MGTM  248 (361)
Q Consensus       183 ~g~~vlV~Ga-g~vG~~a~~la~~~g~~vi~~~~~~~~~~~~~~~---~g~~---~vv~~~~~~~~~~~-------~~g~  248 (361)
                      ++.+++|.|+ |.+|...+..+...|++|++++++.+. ....++   .+..   ...|..+++.+..+       .+.+
T Consensus         5 ~~~~~lItG~s~giG~~la~~l~~~G~~Vv~~~r~~~~-~~~~~~~~~~~~~~~~~~~Dl~~~~~v~~~~~~~~~~~~~i   83 (263)
T PRK08226          5 TGKTALITGALQGIGEGIARVFARHGANLILLDISPEI-EKLADELCGRGHRCTAVVADVRDPASVAAAIKRAKEKEGRI   83 (263)
T ss_pred             CCCEEEEeCCCChHHHHHHHHHHHCCCEEEEecCCHHH-HHHHHHHHHhCCceEEEECCCCCHHHHHHHHHHHHHHcCCC
Confidence            4678999997 999999999999999999999887642 222222   2322   12344554433332       2468


Q ss_pred             cEEEEcCCC
Q 018067          249 DGIIDTVSA  257 (361)
Q Consensus       249 d~vid~~g~  257 (361)
                      |++|.++|.
T Consensus        84 d~vi~~ag~   92 (263)
T PRK08226         84 DILVNNAGV   92 (263)
T ss_pred             CEEEECCCc
Confidence            999999984

>PLN03075 nicotianamine synthase; Provisional

Probab=95.16  E-value=0.098  Score=47.31  Aligned_cols=104  Identities=17%  Similarity=0.110  Sum_probs=65.8

Q ss_pred             HhhhcCCCCCCCEEEEEcCChHHHHHHHHHHHc--CCeEEEEeCCchhHHHHHHHc----CCCEEecCCCHHHHHHh--c
Q 018067          174 PLRFYGLDKPGMHVGVVGLGGLGHVAVKFAKAM--GVKVTVISTSPSKKSEAIERL----GADSFLVSRDQDEMQAA--M  245 (361)
Q Consensus       174 ~l~~~~~~~~g~~vlV~Gag~vG~~a~~la~~~--g~~vi~~~~~~~~~~~~~~~~----g~~~vv~~~~~~~~~~~--~  245 (361)
                      .+..... .++++|+-+|+|+.++.++.+++..  +.+++.++.+++....+.+.+    |...-+.....|.....  .
T Consensus       115 ~L~~~~~-~~p~~VldIGcGpgpltaiilaa~~~p~~~~~giD~d~~ai~~Ar~~~~~~~gL~~rV~F~~~Da~~~~~~l  193 (296)
T PLN03075        115 LLSQHVN-GVPTKVAFVGSGPLPLTSIVLAKHHLPTTSFHNFDIDPSANDVARRLVSSDPDLSKRMFFHTADVMDVTESL  193 (296)
T ss_pred             HHHHhhc-CCCCEEEEECCCCcHHHHHHHHHhcCCCCEEEEEeCCHHHHHHHHHHhhhccCccCCcEEEECchhhccccc
Confidence            3434443 3778999999999999998888754  458999999887655443333    22111111111221111  2


Q ss_pred             CCccEEEEcC-------CCcccHHHHHhccccCCEEEEec
Q 018067          246 GTMDGIIDTV-------SAVHPLMPLIGLLKSQGKLVLVG  278 (361)
Q Consensus       246 ~g~d~vid~~-------g~~~~~~~~~~~l~~~G~~v~~g  278 (361)
                      +++|+||-.+       .....+....+.|++||.++.-.
T Consensus       194 ~~FDlVF~~ALi~~dk~~k~~vL~~l~~~LkPGG~Lvlr~  233 (296)
T PLN03075        194 KEYDVVFLAALVGMDKEEKVKVIEHLGKHMAPGALLMLRS  233 (296)
T ss_pred             CCcCEEEEecccccccccHHHHHHHHHHhcCCCcEEEEec
Confidence            5799998764       11234677888999999988764

>PLN02686 cinnamoyl-CoA reductase

Probab=95.16  E-value=0.11  Score=48.92  Aligned_cols=74  Identities=18%  Similarity=0.199  Sum_probs=51.8

Q ss_pred             CCCCEEEEEcC-ChHHHHHHHHHHHcCCeEEEEeCCchhHHHHHHHc-----------CCCE-EecCCCHHHHHHhcCCc
Q 018067          182 KPGMHVGVVGL-GGLGHVAVKFAKAMGVKVTVISTSPSKKSEAIERL-----------GADS-FLVSRDQDEMQAAMGTM  248 (361)
Q Consensus       182 ~~g~~vlV~Ga-g~vG~~a~~la~~~g~~vi~~~~~~~~~~~~~~~~-----------g~~~-vv~~~~~~~~~~~~~g~  248 (361)
                      ..+++|||.|+ |.+|..++..+...|++|+++.++.+....+ +.+           +... ..|..+.+.+.++..++
T Consensus        51 ~~~k~VLVTGatGfIG~~lv~~L~~~G~~V~~~~r~~~~~~~l-~~l~~~~~~~~~~~~~~~v~~Dl~d~~~l~~~i~~~  129 (367)
T PLN02686         51 AEARLVCVTGGVSFLGLAIVDRLLRHGYSVRIAVDTQEDKEKL-REMEMFGEMGRSNDGIWTVMANLTEPESLHEAFDGC  129 (367)
T ss_pred             CCCCEEEEECCchHHHHHHHHHHHHCCCEEEEEeCCHHHHHHH-HHHhhhccccccCCceEEEEcCCCCHHHHHHHHHhc
Confidence            56789999997 9999999999999999998888776554443 222           1221 12455566666666678


Q ss_pred             cEEEEcCC
Q 018067          249 DGIIDTVS  256 (361)
Q Consensus       249 d~vid~~g  256 (361)
                      |.||.+++
T Consensus       130 d~V~hlA~  137 (367)
T PLN02686        130 AGVFHTSA  137 (367)
T ss_pred             cEEEecCe
Confidence            88887654

>PRK07792 fabG 3-ketoacyl-(acyl-carrier-protein) reductase; Provisional

Probab=95.15  E-value=0.13  Score=47.14  Aligned_cols=75  Identities=19%  Similarity=0.284  Sum_probs=49.7

Q ss_pred             CCCEEEEEcC-ChHHHHHHHHHHHcCCeEEEEeCCch-hHHHHHH---HcCCCE---EecCCCHHHHHHh------cCCc
Q 018067          183 PGMHVGVVGL-GGLGHVAVKFAKAMGVKVTVISTSPS-KKSEAIE---RLGADS---FLVSRDQDEMQAA------MGTM  248 (361)
Q Consensus       183 ~g~~vlV~Ga-g~vG~~a~~la~~~g~~vi~~~~~~~-~~~~~~~---~~g~~~---vv~~~~~~~~~~~------~~g~  248 (361)
                      .|+++||.|+ |++|...++.+...|++|++.++... +...+.+   ..|...   ..|..+.+.+..+      .+++
T Consensus        11 ~~k~~lVTGas~gIG~~ia~~L~~~Ga~Vv~~~~~~~~~~~~~~~~i~~~g~~~~~~~~Dv~d~~~~~~~~~~~~~~g~i   90 (306)
T PRK07792         11 SGKVAVVTGAAAGLGRAEALGLARLGATVVVNDVASALDASDVLDEIRAAGAKAVAVAGDISQRATADELVATAVGLGGL   90 (306)
T ss_pred             CCCEEEEECCCChHHHHHHHHHHHCCCEEEEecCCchhHHHHHHHHHHhcCCeEEEEeCCCCCHHHHHHHHHHHHHhCCC
Confidence            5788999997 99999999999999999998876532 2333322   234322   1234444333322      2579


Q ss_pred             cEEEEcCCC
Q 018067          249 DGIIDTVSA  257 (361)
Q Consensus       249 d~vid~~g~  257 (361)
                      |++|+++|.
T Consensus        91 D~li~nAG~   99 (306)
T PRK07792         91 DIVVNNAGI   99 (306)
T ss_pred             CEEEECCCC
Confidence            999999885

>KOG1208 consensus Dehydrogenases with different specificities (related to short-chain alcohol dehydrogenases) [Secondary metabolites biosynthesis, transport and catabolism]

Probab=95.14  E-value=0.11  Score=47.80  Aligned_cols=100  Identities=20%  Similarity=0.229  Sum_probs=68.4

Q ss_pred             CCCCEEEEEcC-ChHHHHHHHHHHHcCCeEEEEeCCchhHHHHHHHcCC----C----EEecCCCHHHHHHh-------c
Q 018067          182 KPGMHVGVVGL-GGLGHVAVKFAKAMGVKVTVISTSPSKKSEAIERLGA----D----SFLVSRDQDEMQAA-------M  245 (361)
Q Consensus       182 ~~g~~vlV~Ga-g~vG~~a~~la~~~g~~vi~~~~~~~~~~~~~~~~g~----~----~vv~~~~~~~~~~~-------~  245 (361)
                      -.|.+++|.|+ +++|..++..+-..|++|++.+++.++.+++.+++..    .    ...|-.+.+.++.+       .
T Consensus        33 ~~~~~~vVTGansGIG~eta~~La~~Ga~Vv~~~R~~~~~~~~~~~i~~~~~~~~i~~~~lDLssl~SV~~fa~~~~~~~  112 (314)
T KOG1208|consen   33 LSGKVALVTGATSGIGFETARELALRGAHVVLACRNEERGEEAKEQIQKGKANQKIRVIQLDLSSLKSVRKFAEEFKKKE  112 (314)
T ss_pred             CCCcEEEEECCCCchHHHHHHHHHhCCCEEEEEeCCHHHHHHHHHHHHhcCCCCceEEEECCCCCHHHHHHHHHHHHhcC
Confidence            45678899998 9999999999999999999999998776666555542    1    22344444433332       2


Q ss_pred             CCccEEEEcCCCc-----------------------ccHHHHHhccccC--CEEEEecCCC
Q 018067          246 GTMDGIIDTVSAV-----------------------HPLMPLIGLLKSQ--GKLVLVGAPE  281 (361)
Q Consensus       246 ~g~d~vid~~g~~-----------------------~~~~~~~~~l~~~--G~~v~~g~~~  281 (361)
                      .+.|+.|+++|--                       ...+..+..|+..  +|+|.+++..
T Consensus       113 ~~ldvLInNAGV~~~~~~~t~DG~E~~~~tN~lg~flLt~lLlp~lk~s~~~RIV~vsS~~  173 (314)
T KOG1208|consen  113 GPLDVLINNAGVMAPPFSLTKDGLELTFATNYLGHFLLTELLLPLLKRSAPSRIVNVSSIL  173 (314)
T ss_pred             CCccEEEeCcccccCCcccCccchhheehhhhHHHHHHHHHHHHHHhhCCCCCEEEEcCcc
Confidence            4799999988831                       1123344455433  8999997743

>COG2227 UbiG 2-polyprenyl-3-methyl-5-hydroxy-6-metoxy-1,4-benzoquinol methylase [Coenzyme metabolism]

Probab=95.13  E-value=0.15  Score=44.17  Aligned_cols=92  Identities=29%  Similarity=0.370  Sum_probs=58.3

Q ss_pred             CCCCEEEEEcCChHHHHHHHHHHHcCCeEEEEeCCchhHHHHH---HHcCCCEEecCCCH--HHHHHhcCCccEEEEc--
Q 018067          182 KPGMHVGVVGLGGLGHVAVKFAKAMGVKVTVISTSPSKKSEAI---ERLGADSFLVSRDQ--DEMQAAMGTMDGIIDT--  254 (361)
Q Consensus       182 ~~g~~vlV~Gag~vG~~a~~la~~~g~~vi~~~~~~~~~~~~~---~~~g~~~vv~~~~~--~~~~~~~~g~d~vid~--  254 (361)
                      -+|.+||=+|+|+ |++..-+|+ +|++|+.++-+++..+.+.   .+-|..  +++...  +.+....+.||+|+..  
T Consensus        58 l~g~~vLDvGCGg-G~Lse~mAr-~Ga~VtgiD~se~~I~~Ak~ha~e~gv~--i~y~~~~~edl~~~~~~FDvV~cmEV  133 (243)
T COG2227          58 LPGLRVLDVGCGG-GILSEPLAR-LGASVTGIDASEKPIEVAKLHALESGVN--IDYRQATVEDLASAGGQFDVVTCMEV  133 (243)
T ss_pred             CCCCeEEEecCCc-cHhhHHHHH-CCCeeEEecCChHHHHHHHHhhhhcccc--ccchhhhHHHHHhcCCCccEEEEhhH
Confidence            4788899999854 555555554 5799999999887654442   122332  345442  2222333579998763  


Q ss_pred             ---CCCcc-cHHHHHhccccCCEEEEe
Q 018067          255 ---VSAVH-PLMPLIGLLKSQGKLVLV  277 (361)
Q Consensus       255 ---~g~~~-~~~~~~~~l~~~G~~v~~  277 (361)
                         +..+. .+..|.+.++|+|.+..-
T Consensus       134 lEHv~dp~~~~~~c~~lvkP~G~lf~S  160 (243)
T COG2227         134 LEHVPDPESFLRACAKLVKPGGILFLS  160 (243)
T ss_pred             HHccCCHHHHHHHHHHHcCCCcEEEEe
Confidence               33322 356788999999987654

>PRK12743 oxidoreductase; Provisional

Probab=95.12  E-value=0.2  Score=44.43  Aligned_cols=74  Identities=19%  Similarity=0.235  Sum_probs=49.1

Q ss_pred             CCEEEEEcC-ChHHHHHHHHHHHcCCeEEEEeCCc-hhHHHHH---HHcCCC-E--EecCCCHHHHHHh-------cCCc
Q 018067          184 GMHVGVVGL-GGLGHVAVKFAKAMGVKVTVISTSP-SKKSEAI---ERLGAD-S--FLVSRDQDEMQAA-------MGTM  248 (361)
Q Consensus       184 g~~vlV~Ga-g~vG~~a~~la~~~g~~vi~~~~~~-~~~~~~~---~~~g~~-~--vv~~~~~~~~~~~-------~~g~  248 (361)
                      ++++||.|+ |.+|..+++.+...|++|+++.+.. ++...+.   +..+.+ .  ..|..+.+.+..+       .+++
T Consensus         2 ~k~vlItGas~giG~~~a~~l~~~G~~V~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~Dl~~~~~~~~~~~~~~~~~~~i   81 (256)
T PRK12743          2 AQVAIVTASDSGIGKACALLLAQQGFDIGITWHSDEEGAKETAEEVRSHGVRAEIRQLDLSDLPEGAQALDKLIQRLGRI   81 (256)
T ss_pred             CCEEEEECCCchHHHHHHHHHHHCCCEEEEEeCCChHHHHHHHHHHHhcCCceEEEEccCCCHHHHHHHHHHHHHHcCCC
Confidence            568999998 9999999999999999998876543 3332322   234533 1  2344554433222       2469


Q ss_pred             cEEEEcCCC
Q 018067          249 DGIIDTVSA  257 (361)
Q Consensus       249 d~vid~~g~  257 (361)
                      |++|.++|.
T Consensus        82 d~li~~ag~   90 (256)
T PRK12743         82 DVLVNNAGA   90 (256)
T ss_pred             CEEEECCCC
Confidence            999999874

>PLN02695 GDP-D-mannose-3',5'-epimerase

Probab=95.12  E-value=0.072  Score=50.29  Aligned_cols=74  Identities=9%  Similarity=0.116  Sum_probs=50.5

Q ss_pred             CCCCEEEEEcC-ChHHHHHHHHHHHcCCeEEEEeCCchhHHHHHHHcCCCE-EecCCCHHHHHHhcCCccEEEEcCC
Q 018067          182 KPGMHVGVVGL-GGLGHVAVKFAKAMGVKVTVISTSPSKKSEAIERLGADS-FLVSRDQDEMQAAMGTMDGIIDTVS  256 (361)
Q Consensus       182 ~~g~~vlV~Ga-g~vG~~a~~la~~~g~~vi~~~~~~~~~~~~~~~~g~~~-vv~~~~~~~~~~~~~g~d~vid~~g  256 (361)
                      ..+.+|||+|+ |-+|..++..+...|.+|+++++........ ..++... ..|..+.+.+..+..++|+||++++
T Consensus        19 ~~~~~IlVtGgtGfIG~~l~~~L~~~G~~V~~v~r~~~~~~~~-~~~~~~~~~~Dl~d~~~~~~~~~~~D~Vih~Aa   94 (370)
T PLN02695         19 SEKLRICITGAGGFIASHIARRLKAEGHYIIASDWKKNEHMSE-DMFCHEFHLVDLRVMENCLKVTKGVDHVFNLAA   94 (370)
T ss_pred             CCCCEEEEECCccHHHHHHHHHHHhCCCEEEEEEecccccccc-ccccceEEECCCCCHHHHHHHHhCCCEEEEccc
Confidence            46789999998 9999999999999999999998754321111 0112221 1244455555555568999999985

>PRK15116 sulfur acceptor protein CsdL; Provisional

Probab=95.11  E-value=0.15  Score=45.49  Aligned_cols=99  Identities=25%  Similarity=0.420  Sum_probs=58.0

Q ss_pred             CCCEEEEEcCChHHHHHHHHHHHcCC-eEEEEeCCchhH----------------------HHHHHHcCCC-EEecCC--
Q 018067          183 PGMHVGVVGLGGLGHVAVKFAKAMGV-KVTVISTSPSKK----------------------SEAIERLGAD-SFLVSR--  236 (361)
Q Consensus       183 ~g~~vlV~Gag~vG~~a~~la~~~g~-~vi~~~~~~~~~----------------------~~~~~~~g~~-~vv~~~--  236 (361)
                      .+.+|+|+|+|++|..++..+-..|. ++++++...-..                      .+...++..+ .+....  
T Consensus        29 ~~s~VlVvG~GGVGs~vae~Lar~GVg~itLiD~D~V~~sNlnRQ~~~~~~~vG~~Kve~~~~rl~~INP~~~V~~i~~~  108 (268)
T PRK15116         29 ADAHICVVGIGGVGSWAAEALARTGIGAITLIDMDDVCVTNTNRQIHALRDNVGLAKAEVMAERIRQINPECRVTVVDDF  108 (268)
T ss_pred             cCCCEEEECcCHHHHHHHHHHHHcCCCEEEEEeCCEecccccccccccChhhcChHHHHHHHHHHHhHCCCcEEEEEecc
Confidence            45779999999999999999999996 777777542110                      1111222221 111111  


Q ss_pred             -CHHHHHHhc-CCccEEEEcCCCcccHHHHHhccc-cCCEEEEecCCC
Q 018067          237 -DQDEMQAAM-GTMDGIIDTVSAVHPLMPLIGLLK-SQGKLVLVGAPE  281 (361)
Q Consensus       237 -~~~~~~~~~-~g~d~vid~~g~~~~~~~~~~~l~-~~G~~v~~g~~~  281 (361)
                       .++...++. ..+|+||||.+....-....+.++ .+=.++..|...
T Consensus       109 i~~e~~~~ll~~~~D~VIdaiD~~~~k~~L~~~c~~~~ip~I~~gGag  156 (268)
T PRK15116        109 ITPDNVAEYMSAGFSYVIDAIDSVRPKAALIAYCRRNKIPLVTTGGAG  156 (268)
T ss_pred             cChhhHHHHhcCCCCEEEEcCCCHHHHHHHHHHHHHcCCCEEEECCcc
Confidence             234444443 479999999998542333344443 344666666543

>PRK08993 2-deoxy-D-gluconate 3-dehydrogenase; Validated

Probab=95.11  E-value=0.17  Score=44.73  Aligned_cols=75  Identities=21%  Similarity=0.241  Sum_probs=48.9

Q ss_pred             CCCEEEEEcC-ChHHHHHHHHHHHcCCeEEEEeCCchh-HHHHHHHcCCCE---EecCCCHHHHHHh-------cCCccE
Q 018067          183 PGMHVGVVGL-GGLGHVAVKFAKAMGVKVTVISTSPSK-KSEAIERLGADS---FLVSRDQDEMQAA-------MGTMDG  250 (361)
Q Consensus       183 ~g~~vlV~Ga-g~vG~~a~~la~~~g~~vi~~~~~~~~-~~~~~~~~g~~~---vv~~~~~~~~~~~-------~~g~d~  250 (361)
                      .|+++||.|+ |++|.++++.+...|++|+.+++.... .....+..+...   ..|-.+.+.+..+       .+++|+
T Consensus         9 ~~k~~lItG~~~gIG~a~a~~l~~~G~~vv~~~~~~~~~~~~~~~~~~~~~~~~~~Dl~~~~~~~~~~~~~~~~~~~~D~   88 (253)
T PRK08993          9 EGKVAVVTGCDTGLGQGMALGLAEAGCDIVGINIVEPTETIEQVTALGRRFLSLTADLRKIDGIPALLERAVAEFGHIDI   88 (253)
T ss_pred             CCCEEEEECCCchHHHHHHHHHHHCCCEEEEecCcchHHHHHHHHhcCCeEEEEECCCCCHHHHHHHHHHHHHHhCCCCE
Confidence            4788999997 999999999999999999887654321 111123334221   2344444433322       247999


Q ss_pred             EEEcCCC
Q 018067          251 IIDTVSA  257 (361)
Q Consensus       251 vid~~g~  257 (361)
                      +|+++|.
T Consensus        89 li~~Ag~   95 (253)
T PRK08993         89 LVNNAGL   95 (253)
T ss_pred             EEECCCC
Confidence            9999985

>PRK09134 short chain dehydrogenase; Provisional

Probab=95.10  E-value=0.18  Score=44.79  Aligned_cols=75  Identities=17%  Similarity=0.182  Sum_probs=49.5

Q ss_pred             CCCEEEEEcC-ChHHHHHHHHHHHcCCeEEEEeCCc-hhHHHHHHHc---CCC---EEecCCCHHHHHHh-------cCC
Q 018067          183 PGMHVGVVGL-GGLGHVAVKFAKAMGVKVTVISTSP-SKKSEAIERL---GAD---SFLVSRDQDEMQAA-------MGT  247 (361)
Q Consensus       183 ~g~~vlV~Ga-g~vG~~a~~la~~~g~~vi~~~~~~-~~~~~~~~~~---g~~---~vv~~~~~~~~~~~-------~~g  247 (361)
                      .+.++||.|+ |.+|..++..+...|++|+++++.. ++...+.+++   +..   ...|..+.+.+.++       .++
T Consensus         8 ~~k~vlItGas~giG~~la~~l~~~g~~v~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~Dl~d~~~~~~~~~~~~~~~~~   87 (258)
T PRK09134          8 APRAALVTGAARRIGRAIALDLAAHGFDVAVHYNRSRDEAEALAAEIRALGRRAVALQADLADEAEVRALVARASAALGP   87 (258)
T ss_pred             CCCEEEEeCCCcHHHHHHHHHHHHCCCEEEEEeCCCHHHHHHHHHHHHhcCCeEEEEEcCCCCHHHHHHHHHHHHHHcCC
Confidence            4678999998 9999999999988999998876643 3333332222   332   12244554433322       246


Q ss_pred             ccEEEEcCCC
Q 018067          248 MDGIIDTVSA  257 (361)
Q Consensus       248 ~d~vid~~g~  257 (361)
                      +|++|.++|.
T Consensus        88 iD~vi~~ag~   97 (258)
T PRK09134         88 ITLLVNNASL   97 (258)
T ss_pred             CCEEEECCcC
Confidence            8999999974

>PRK08762 molybdopterin biosynthesis protein MoeB; Validated

Probab=95.09  E-value=0.15  Score=48.32  Aligned_cols=77  Identities=23%  Similarity=0.372  Sum_probs=50.1

Q ss_pred             CCCEEEEEcCChHHHHHHHHHHHcCC-eEEEEeCC-------------------chhHHHHHHHc---CC-CEEecCC--
Q 018067          183 PGMHVGVVGLGGLGHVAVKFAKAMGV-KVTVISTS-------------------PSKKSEAIERL---GA-DSFLVSR--  236 (361)
Q Consensus       183 ~g~~vlV~Gag~vG~~a~~la~~~g~-~vi~~~~~-------------------~~~~~~~~~~~---g~-~~vv~~~--  236 (361)
                      .+.+|+|+|+|++|..++..+...|. ++++++..                   ..+.+.+.+.+   .. ..+....  
T Consensus       134 ~~~~VlvvG~GG~Gs~ia~~La~~Gvg~i~lvD~d~v~~sNl~Rq~l~~~~diG~~Ka~~~~~~l~~~np~v~v~~~~~~  213 (376)
T PRK08762        134 LEARVLLIGAGGLGSPAALYLAAAGVGTLGIVDHDVVDRSNLQRQILHTEDRVGQPKVDSAAQRLAALNPDVQVEAVQER  213 (376)
T ss_pred             hcCcEEEECCCHHHHHHHHHHHHcCCCeEEEEeCCEecchhhccccccchhhCCCcHHHHHHHHHHHHCCCCEEEEEecc
Confidence            45679999999999999999999999 67777765                   12222222222   22 1111111  


Q ss_pred             -CHHHHHHhcCCccEEEEcCCCcc
Q 018067          237 -DQDEMQAAMGTMDGIIDTVSAVH  259 (361)
Q Consensus       237 -~~~~~~~~~~g~d~vid~~g~~~  259 (361)
                       +.+.+..+..++|+||||+.+..
T Consensus       214 ~~~~~~~~~~~~~D~Vv~~~d~~~  237 (376)
T PRK08762        214 VTSDNVEALLQDVDVVVDGADNFP  237 (376)
T ss_pred             CChHHHHHHHhCCCEEEECCCCHH
Confidence             23344555568999999999865

>PRK07577 short chain dehydrogenase; Provisional

Probab=95.09  E-value=0.099  Score=45.52  Aligned_cols=68  Identities=21%  Similarity=0.231  Sum_probs=48.0

Q ss_pred             CCEEEEEcC-ChHHHHHHHHHHHcCCeEEEEeCCchhHHHHHHHcCCC-EEecCCCHHHHHHhc------CCccEEEEcC
Q 018067          184 GMHVGVVGL-GGLGHVAVKFAKAMGVKVTVISTSPSKKSEAIERLGAD-SFLVSRDQDEMQAAM------GTMDGIIDTV  255 (361)
Q Consensus       184 g~~vlV~Ga-g~vG~~a~~la~~~g~~vi~~~~~~~~~~~~~~~~g~~-~vv~~~~~~~~~~~~------~g~d~vid~~  255 (361)
                      ++++||.|+ |.+|..+++.+...|++|+++.++.++.      +... ...|..+.+.+..+.      .+.|++|.++
T Consensus         3 ~k~vlItG~s~~iG~~ia~~l~~~G~~v~~~~r~~~~~------~~~~~~~~D~~~~~~~~~~~~~~~~~~~~d~vi~~a   76 (234)
T PRK07577          3 SRTVLVTGATKGIGLALSLRLANLGHQVIGIARSAIDD------FPGELFACDLADIEQTAATLAQINEIHPVDAIVNNV   76 (234)
T ss_pred             CCEEEEECCCCcHHHHHHHHHHHCCCEEEEEeCCcccc------cCceEEEeeCCCHHHHHHHHHHHHHhCCCcEEEECC
Confidence            578999998 9999999999999999999998876541      1211 223445544333221      2689999998


Q ss_pred             CC
Q 018067          256 SA  257 (361)
Q Consensus       256 g~  257 (361)
                      |.
T Consensus        77 g~   78 (234)
T PRK07577         77 GI   78 (234)
T ss_pred             CC
Confidence            85

>PLN02256 arogenate dehydrogenase

Probab=95.09  E-value=0.23  Score=45.41  Aligned_cols=90  Identities=24%  Similarity=0.290  Sum_probs=60.5

Q ss_pred             CCCCEEEEEcCChHHHHHHHHHHHcCCeEEEEeCCchhHHHHHHHcCCCEEecCCCHHHHHHhcCCccEEEEcCCCcccH
Q 018067          182 KPGMHVGVVGLGGLGHVAVKFAKAMGVKVTVISTSPSKKSEAIERLGADSFLVSRDQDEMQAAMGTMDGIIDTVSAVHPL  261 (361)
Q Consensus       182 ~~g~~vlV~Gag~vG~~a~~la~~~g~~vi~~~~~~~~~~~~~~~~g~~~vv~~~~~~~~~~~~~g~d~vid~~g~~~~~  261 (361)
                      -.+.+|.|+|.|.+|...+..++..|.+|++++++..  ...++++|+..   ..+.+.+  ....+|+||-|+.... +
T Consensus        34 ~~~~kI~IIG~G~mG~slA~~L~~~G~~V~~~d~~~~--~~~a~~~gv~~---~~~~~e~--~~~~aDvVilavp~~~-~  105 (304)
T PLN02256         34 SRKLKIGIVGFGNFGQFLAKTFVKQGHTVLATSRSDY--SDIAAELGVSF---FRDPDDF--CEEHPDVVLLCTSILS-T  105 (304)
T ss_pred             CCCCEEEEEeeCHHHHHHHHHHHhCCCEEEEEECccH--HHHHHHcCCee---eCCHHHH--hhCCCCEEEEecCHHH-H
Confidence            4567899999999999999999988989998888763  24445677632   2221111  1245899999887654 3


Q ss_pred             HHHHh-----ccccCCEEEEecC
Q 018067          262 MPLIG-----LLKSQGKLVLVGA  279 (361)
Q Consensus       262 ~~~~~-----~l~~~G~~v~~g~  279 (361)
                      ...+.     .++++..++.++.
T Consensus       106 ~~vl~~l~~~~l~~~~iviDv~S  128 (304)
T PLN02256        106 EAVLRSLPLQRLKRSTLFVDVLS  128 (304)
T ss_pred             HHHHHhhhhhccCCCCEEEecCC
Confidence            33332     2456677777776

>PRK05599 hypothetical protein; Provisional

Probab=95.08  E-value=0.12  Score=45.53  Aligned_cols=71  Identities=14%  Similarity=0.186  Sum_probs=49.3

Q ss_pred             EEEEEcC-ChHHHHHHHHHHHcCCeEEEEeCCchhHHHHHHHc---CCC--E--EecCCCHHHHHH-------hcCCccE
Q 018067          186 HVGVVGL-GGLGHVAVKFAKAMGVKVTVISTSPSKKSEAIERL---GAD--S--FLVSRDQDEMQA-------AMGTMDG  250 (361)
Q Consensus       186 ~vlV~Ga-g~vG~~a~~la~~~g~~vi~~~~~~~~~~~~~~~~---g~~--~--vv~~~~~~~~~~-------~~~g~d~  250 (361)
                      +++|.|+ +++|.+.+..+. .|.+|+++++++++.+++.+++   |.+  .  ..|-.+++.+..       ..+++|+
T Consensus         2 ~vlItGas~GIG~aia~~l~-~g~~Vil~~r~~~~~~~~~~~l~~~~~~~~~~~~~Dv~d~~~v~~~~~~~~~~~g~id~   80 (246)
T PRK05599          2 SILILGGTSDIAGEIATLLC-HGEDVVLAARRPEAAQGLASDLRQRGATSVHVLSFDAQDLDTHRELVKQTQELAGEISL   80 (246)
T ss_pred             eEEEEeCccHHHHHHHHHHh-CCCEEEEEeCCHHHHHHHHHHHHhccCCceEEEEcccCCHHHHHHHHHHHHHhcCCCCE
Confidence            5889987 999999998876 5999999999887776664443   322  1  224455443332       2357999


Q ss_pred             EEEcCCC
Q 018067          251 IIDTVSA  257 (361)
Q Consensus       251 vid~~g~  257 (361)
                      +++++|.
T Consensus        81 lv~nag~   87 (246)
T PRK05599         81 AVVAFGI   87 (246)
T ss_pred             EEEecCc
Confidence            9998885

>KOG1200 consensus Mitochondrial/plastidial beta-ketoacyl-ACP reductase [Lipid transport and metabolism]

Probab=95.08  E-value=0.16  Score=42.57  Aligned_cols=74  Identities=16%  Similarity=0.282  Sum_probs=53.7

Q ss_pred             CCEEEEEcC-ChHHHHHHHHHHHcCCeEEEEeCCchhHHHHHHHcCC--CEE---ecCCCHHHH----HHh---cCCccE
Q 018067          184 GMHVGVVGL-GGLGHVAVKFAKAMGVKVTVISTSPSKKSEAIERLGA--DSF---LVSRDQDEM----QAA---MGTMDG  250 (361)
Q Consensus       184 g~~vlV~Ga-g~vG~~a~~la~~~g~~vi~~~~~~~~~~~~~~~~g~--~~v---v~~~~~~~~----~~~---~~g~d~  250 (361)
                      .+.++|.|+ ++||.+.+|.+-..|++|.+.+...+.-++.++.+|.  ++.   .|-++++.+    ++.   -+.+++
T Consensus        14 sk~~~vtGg~sGIGrAia~~la~~Garv~v~dl~~~~A~ata~~L~g~~~h~aF~~DVS~a~~v~~~l~e~~k~~g~psv   93 (256)
T KOG1200|consen   14 SKVAAVTGGSSGIGRAIAQLLAKKGARVAVADLDSAAAEATAGDLGGYGDHSAFSCDVSKAHDVQNTLEEMEKSLGTPSV   93 (256)
T ss_pred             cceeEEecCCchHHHHHHHHHHhcCcEEEEeecchhhHHHHHhhcCCCCccceeeeccCcHHHHHHHHHHHHHhcCCCcE
Confidence            345677776 8999999999999999999999988877777788875  331   122333222    222   247999


Q ss_pred             EEEcCCC
Q 018067          251 IIDTVSA  257 (361)
Q Consensus       251 vid~~g~  257 (361)
                      +++|+|-
T Consensus        94 lVncAGI  100 (256)
T KOG1200|consen   94 LVNCAGI  100 (256)
T ss_pred             EEEcCcc
Confidence            9999995

>PLN02662 cinnamyl-alcohol dehydrogenase family protein

Probab=95.07  E-value=0.11  Score=47.73  Aligned_cols=74  Identities=22%  Similarity=0.318  Sum_probs=50.1

Q ss_pred             CCCEEEEEcC-ChHHHHHHHHHHHcCCeEEEEeCCchhHHHHHH--Hc-CC--C-EEe--cCCCHHHHHHhcCCccEEEE
Q 018067          183 PGMHVGVVGL-GGLGHVAVKFAKAMGVKVTVISTSPSKKSEAIE--RL-GA--D-SFL--VSRDQDEMQAAMGTMDGIID  253 (361)
Q Consensus       183 ~g~~vlV~Ga-g~vG~~a~~la~~~g~~vi~~~~~~~~~~~~~~--~~-g~--~-~vv--~~~~~~~~~~~~~g~d~vid  253 (361)
                      .+.+|||.|+ |.+|...+..+...|.+|++++++.+.......  .+ +.  . ..+  |..+++.+..+..++|+||.
T Consensus         3 ~~~~ilVtGatGfIG~~l~~~L~~~g~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~~Dl~~~~~~~~~~~~~d~Vih   82 (322)
T PLN02662          3 EGKVVCVTGASGYIASWLVKLLLQRGYTVKATVRDPNDPKKTEHLLALDGAKERLHLFKANLLEEGSFDSVVDGCEGVFH   82 (322)
T ss_pred             CCCEEEEECChHHHHHHHHHHHHHCCCEEEEEEcCCCchhhHHHHHhccCCCCceEEEeccccCcchHHHHHcCCCEEEE
Confidence            3678999997 999999999999999999988877543221111  11 11  1 122  33444555566668999999


Q ss_pred             cCC
Q 018067          254 TVS  256 (361)
Q Consensus       254 ~~g  256 (361)
                      +++
T Consensus        83 ~A~   85 (322)
T PLN02662         83 TAS   85 (322)
T ss_pred             eCC
Confidence            886

>PRK08317 hypothetical protein; Provisional

Probab=95.07  E-value=0.14  Score=44.62  Aligned_cols=101  Identities=27%  Similarity=0.359  Sum_probs=63.0

Q ss_pred             cCCCCCCCEEEEEcCChHHHHHHHHHHHcC--CeEEEEeCCchhHHHHHHH---cCCCEEecCCCHHHHHHhcCCccEEE
Q 018067          178 YGLDKPGMHVGVVGLGGLGHVAVKFAKAMG--VKVTVISTSPSKKSEAIER---LGADSFLVSRDQDEMQAAMGTMDGII  252 (361)
Q Consensus       178 ~~~~~~g~~vlV~Gag~vG~~a~~la~~~g--~~vi~~~~~~~~~~~~~~~---~g~~~vv~~~~~~~~~~~~~g~d~vi  252 (361)
                      ...++++++||-+|+|. |..+..+++..+  .+++.++.+++......+.   .+.+..+...+........+.+|.|+
T Consensus        14 ~~~~~~~~~vLdiG~G~-G~~~~~~a~~~~~~~~v~~~d~~~~~~~~a~~~~~~~~~~~~~~~~d~~~~~~~~~~~D~v~   92 (241)
T PRK08317         14 LLAVQPGDRVLDVGCGP-GNDARELARRVGPEGRVVGIDRSEAMLALAKERAAGLGPNVEFVRGDADGLPFPDGSFDAVR   92 (241)
T ss_pred             HcCCCCCCEEEEeCCCC-CHHHHHHHHhcCCCcEEEEEeCCHHHHHHHHHHhhCCCCceEEEecccccCCCCCCCceEEE
Confidence            34478899999999976 888889998873  5899998887655444222   11111111111111111124688887


Q ss_pred             EcCC-----C-cccHHHHHhccccCCEEEEecC
Q 018067          253 DTVS-----A-VHPLMPLIGLLKSQGKLVLVGA  279 (361)
Q Consensus       253 d~~g-----~-~~~~~~~~~~l~~~G~~v~~g~  279 (361)
                      -...     . ...+..+.++|+++|.++....
T Consensus        93 ~~~~~~~~~~~~~~l~~~~~~L~~gG~l~~~~~  125 (241)
T PRK08317         93 SDRVLQHLEDPARALAEIARVLRPGGRVVVLDT  125 (241)
T ss_pred             EechhhccCCHHHHHHHHHHHhcCCcEEEEEec
Confidence            5322     1 2346788999999999987753

>PRK06436 glycerate dehydrogenase; Provisional

Probab=95.07  E-value=0.12  Score=47.18  Aligned_cols=86  Identities=20%  Similarity=0.280  Sum_probs=58.1

Q ss_pred             CCCCEEEEEcCChHHHHHHHHHHHcCCeEEEEeCCchhHHHHHHHcCCCEEecCCCHHHHHHhcCCccEEEEcCCCcc--
Q 018067          182 KPGMHVGVVGLGGLGHVAVKFAKAMGVKVTVISTSPSKKSEAIERLGADSFLVSRDQDEMQAAMGTMDGIIDTVSAVH--  259 (361)
Q Consensus       182 ~~g~~vlV~Gag~vG~~a~~la~~~g~~vi~~~~~~~~~~~~~~~~g~~~vv~~~~~~~~~~~~~g~d~vid~~g~~~--  259 (361)
                      -.|++|.|+|.|.+|...+++++.+|++|++.+++...       .+....  ..   .+.++....|+|+.++....  
T Consensus       120 L~gktvgIiG~G~IG~~vA~~l~afG~~V~~~~r~~~~-------~~~~~~--~~---~l~ell~~aDiv~~~lp~t~~T  187 (303)
T PRK06436        120 LYNKSLGILGYGGIGRRVALLAKAFGMNIYAYTRSYVN-------DGISSI--YM---EPEDIMKKSDFVLISLPLTDET  187 (303)
T ss_pred             CCCCEEEEECcCHHHHHHHHHHHHCCCEEEEECCCCcc-------cCcccc--cC---CHHHHHhhCCEEEECCCCCchh
Confidence            36899999999999999999999999999999876321       122111  11   13344446788877766422  


Q ss_pred             ---cHHHHHhccccCCEEEEecC
Q 018067          260 ---PLMPLIGLLKSQGKLVLVGA  279 (361)
Q Consensus       260 ---~~~~~~~~l~~~G~~v~~g~  279 (361)
                         .-...++.++++..+|.++.
T Consensus       188 ~~li~~~~l~~mk~ga~lIN~sR  210 (303)
T PRK06436        188 RGMINSKMLSLFRKGLAIINVAR  210 (303)
T ss_pred             hcCcCHHHHhcCCCCeEEEECCC
Confidence               11345677788777777764

>PRK07402 precorrin-6B methylase; Provisional

Probab=95.06  E-value=0.56  Score=39.84  Aligned_cols=101  Identities=17%  Similarity=0.169  Sum_probs=59.3

Q ss_pred             cCCCCCCCEEEEEcCChHHHHHHHHHHHc-CCeEEEEeCCchhHHHHHH---HcCCC--EEecCCCHHHHHHhcCCccEE
Q 018067          178 YGLDKPGMHVGVVGLGGLGHVAVKFAKAM-GVKVTVISTSPSKKSEAIE---RLGAD--SFLVSRDQDEMQAAMGTMDGI  251 (361)
Q Consensus       178 ~~~~~~g~~vlV~Gag~vG~~a~~la~~~-g~~vi~~~~~~~~~~~~~~---~~g~~--~vv~~~~~~~~~~~~~g~d~v  251 (361)
                      ...++++++||=+|+|. |..++.+++.. +.+|+.++.+++....+.+   +++..  .++..+..+....+...+|.+
T Consensus        35 ~l~~~~~~~VLDiG~G~-G~~~~~la~~~~~~~V~~vD~s~~~~~~a~~n~~~~~~~~v~~~~~d~~~~~~~~~~~~d~v  113 (196)
T PRK07402         35 QLRLEPDSVLWDIGAGT-GTIPVEAGLLCPKGRVIAIERDEEVVNLIRRNCDRFGVKNVEVIEGSAPECLAQLAPAPDRV  113 (196)
T ss_pred             hcCCCCCCEEEEeCCCC-CHHHHHHHHHCCCCEEEEEeCCHHHHHHHHHHHHHhCCCCeEEEECchHHHHhhCCCCCCEE
Confidence            33467888887788743 44555666554 5699999998876544432   35543  222222223233333334444


Q ss_pred             -EEcCCC-cccHHHHHhccccCCEEEEecC
Q 018067          252 -IDTVSA-VHPLMPLIGLLKSQGKLVLVGA  279 (361)
Q Consensus       252 -id~~g~-~~~~~~~~~~l~~~G~~v~~g~  279 (361)
                       ++.... ...+..+.+.|+++|+++....
T Consensus       114 ~~~~~~~~~~~l~~~~~~LkpgG~li~~~~  143 (196)
T PRK07402        114 CIEGGRPIKEILQAVWQYLKPGGRLVATAS  143 (196)
T ss_pred             EEECCcCHHHHHHHHHHhcCCCeEEEEEee
Confidence             443222 2446788889999999988743

>TIGR02355 moeB molybdopterin synthase sulfurylase MoeB

Probab=95.05  E-value=0.11  Score=45.87  Aligned_cols=76  Identities=26%  Similarity=0.462  Sum_probs=48.2

Q ss_pred             CCEEEEEcCChHHHHHHHHHHHcCC-eEEEEeCCchhH-------------------H---HHHHHcCCC-EE--ec-CC
Q 018067          184 GMHVGVVGLGGLGHVAVKFAKAMGV-KVTVISTSPSKK-------------------S---EAIERLGAD-SF--LV-SR  236 (361)
Q Consensus       184 g~~vlV~Gag~vG~~a~~la~~~g~-~vi~~~~~~~~~-------------------~---~~~~~~g~~-~v--v~-~~  236 (361)
                      +.+|+|+|+|++|..+++.+...|. ++++++...-+.                   +   +..+++..+ .+  ++ .-
T Consensus        24 ~~~VlvvG~GglGs~va~~La~~Gvg~i~lvD~D~ve~sNL~RQ~l~~~~diG~~Ka~~a~~~l~~inp~v~i~~~~~~i  103 (240)
T TIGR02355        24 ASRVLIVGLGGLGCAASQYLAAAGVGNLTLLDFDTVSLSNLQRQVLHSDANIGQPKVESAKDALTQINPHIAINPINAKL  103 (240)
T ss_pred             CCcEEEECcCHHHHHHHHHHHHcCCCEEEEEeCCcccccCcccceeeeHhhCCCcHHHHHHHHHHHHCCCcEEEEEeccC
Confidence            4679999999999999999999998 666665432111                   1   111222321 11  11 11


Q ss_pred             CHHHHHHhcCCccEEEEcCCCcc
Q 018067          237 DQDEMQAAMGTMDGIIDTVSAVH  259 (361)
Q Consensus       237 ~~~~~~~~~~g~d~vid~~g~~~  259 (361)
                      +.+.+.++..++|+||||..+..
T Consensus       104 ~~~~~~~~~~~~DlVvd~~D~~~  126 (240)
T TIGR02355       104 DDAELAALIAEHDIVVDCTDNVE  126 (240)
T ss_pred             CHHHHHHHhhcCCEEEEcCCCHH
Confidence            23445555678999999999876

This model describes the molybdopterin biosynthesis protein MoeB in E. coli and related species. The enzyme covalently modifies the molybdopterin synthase MoaD by sulfurylation. This enzyme is closely related to ThiF, a thiamine biosynthesis enzyme that modifies ThiS by an analogous adenylation. Both MoeB and ThiF belong to the HesA/MoeB/ThiF family (pfam00899).

>PRK05479 ketol-acid reductoisomerase; Provisional

Probab=95.04  E-value=0.16  Score=46.79  Aligned_cols=70  Identities=24%  Similarity=0.244  Sum_probs=53.0

Q ss_pred             CCCEEEEEcCChHHHHHHHHHHHcCCeEEEEeCCchhHHHHHHHcCCCEEecCCCHHHHHHhcCCccEEEEcCCCcc
Q 018067          183 PGMHVGVVGLGGLGHVAVKFAKAMGVKVTVISTSPSKKSEAIERLGADSFLVSRDQDEMQAAMGTMDGIIDTVSAVH  259 (361)
Q Consensus       183 ~g~~vlV~Gag~vG~~a~~la~~~g~~vi~~~~~~~~~~~~~~~~g~~~vv~~~~~~~~~~~~~g~d~vid~~g~~~  259 (361)
                      .+++|.|+|.|.+|.+.++-++..|.+|++..+..++....+++.|....    +   ..++....|+|+-++....
T Consensus        16 ~gktIgIIG~GsmG~AlA~~L~~sG~~Vvv~~r~~~~s~~~A~~~G~~~~----s---~~eaa~~ADVVvLaVPd~~   85 (330)
T PRK05479         16 KGKKVAIIGYGSQGHAHALNLRDSGVDVVVGLREGSKSWKKAEADGFEVL----T---VAEAAKWADVIMILLPDEV   85 (330)
T ss_pred             CCCEEEEEeeHHHHHHHHHHHHHCCCEEEEEECCchhhHHHHHHCCCeeC----C---HHHHHhcCCEEEEcCCHHH
Confidence            57889999999999999999999999998877765555555566675421    1   2344557899999988654

>TIGR01829 AcAcCoA_reduct acetoacetyl-CoA reductase

Probab=95.03  E-value=0.13  Score=45.01  Aligned_cols=73  Identities=16%  Similarity=0.206  Sum_probs=47.6

Q ss_pred             CEEEEEcC-ChHHHHHHHHHHHcCCeEEEEeC-CchhHHHHHHHc---CCC---EEecCCCHHHHHH-------hcCCcc
Q 018067          185 MHVGVVGL-GGLGHVAVKFAKAMGVKVTVIST-SPSKKSEAIERL---GAD---SFLVSRDQDEMQA-------AMGTMD  249 (361)
Q Consensus       185 ~~vlV~Ga-g~vG~~a~~la~~~g~~vi~~~~-~~~~~~~~~~~~---g~~---~vv~~~~~~~~~~-------~~~g~d  249 (361)
                      +++||.|+ |.+|...+..+...|++|+++.+ +.++.....++.   +..   ...|..+++.+.+       ..+.+|
T Consensus         1 k~~lItG~sg~iG~~la~~l~~~G~~v~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~D~~~~~~~~~~~~~~~~~~~~id   80 (242)
T TIGR01829         1 RIALVTGGMGGIGTAICQRLAKDGYRVAANCGPNEERAEAWLQEQGALGFDFRVVEGDVSSFESCKAAVAKVEAELGPID   80 (242)
T ss_pred             CEEEEECCCChHHHHHHHHHHHCCCEEEEEeCCCHHHHHHHHHHHHhhCCceEEEEecCCCHHHHHHHHHHHHHHcCCCc
Confidence            46899997 99999999999999999998887 443333332222   211   1224444433322       234699


Q ss_pred             EEEEcCCC
Q 018067          250 GIIDTVSA  257 (361)
Q Consensus       250 ~vid~~g~  257 (361)
                      ++|.++|.
T Consensus        81 ~vi~~ag~   88 (242)
T TIGR01829        81 VLVNNAGI   88 (242)
T ss_pred             EEEECCCC
Confidence            99999974

(R)-3-hydroxyacyl-CoA + NADP+ = 3-oxoacyl-CoA + NADPH. Members of this family may act in the biosynthesis of poly-beta-hydroxybutyrate (e.g. Rhizobium meliloti) and related poly-beta-hydroxyalkanoates. Note that the member of this family from Azospirillum brasilense, designated NodG, appears to lack acetoacetyl-CoA reductase activity and to act instead in the production of nodulation factor. This family is downgraded to subfamily for this NodG. Other proteins designated NodG, as from Rhizobium, belong to related but distinct protein families.

>COG1179 Dinucleotide-utilizing enzymes involved in molybdopterin and thiamine biosynthesis family 1 [Coenzyme metabolism]

Probab=95.01  E-value=0.28  Score=42.57  Aligned_cols=99  Identities=20%  Similarity=0.340  Sum_probs=58.3

Q ss_pred             CCCEEEEEcCChHHHHHHHHHHHcCC-eEEEEeCCch-------------------hH---HHHHHHcCCC-EEec---C
Q 018067          183 PGMHVGVVGLGGLGHVAVKFAKAMGV-KVTVISTSPS-------------------KK---SEAIERLGAD-SFLV---S  235 (361)
Q Consensus       183 ~g~~vlV~Gag~vG~~a~~la~~~g~-~vi~~~~~~~-------------------~~---~~~~~~~g~~-~vv~---~  235 (361)
                      +.++|+|+|.|++|-+++..+-..|. ++.+++-..-                   +.   .+..+..... .+..   .
T Consensus        29 ~~~~V~VvGiGGVGSw~veALaRsGig~itlID~D~v~vTN~NRQi~A~~~~iGk~Kv~vm~eri~~InP~c~V~~~~~f  108 (263)
T COG1179          29 KQAHVCVVGIGGVGSWAVEALARSGIGRITLIDMDDVCVTNTNRQIHALLGDIGKPKVEVMKERIKQINPECEVTAINDF  108 (263)
T ss_pred             hhCcEEEEecCchhHHHHHHHHHcCCCeEEEEecccccccccchhhHhhhhhcccHHHHHHHHHHHhhCCCceEeehHhh
Confidence            45789999999999999999999998 6666664321                   11   1111122211 1111   1


Q ss_pred             CCHHHHHHhcC-CccEEEEcCCCccc-HHHHHhccccCCEEEEecCCC
Q 018067          236 RDQDEMQAAMG-TMDGIIDTVSAVHP-LMPLIGLLKSQGKLVLVGAPE  281 (361)
Q Consensus       236 ~~~~~~~~~~~-g~d~vid~~g~~~~-~~~~~~~l~~~G~~v~~g~~~  281 (361)
                      -.++++..+.. ++|+|+||.-+-.+ ......+.+.+=.+|..+...
T Consensus       109 ~t~en~~~~~~~~~DyvIDaiD~v~~Kv~Li~~c~~~ki~vIss~Gag  156 (263)
T COG1179         109 ITEENLEDLLSKGFDYVIDAIDSVRAKVALIAYCRRNKIPVISSMGAG  156 (263)
T ss_pred             hCHhHHHHHhcCCCCEEEEchhhhHHHHHHHHHHHHcCCCEEeecccc
Confidence            12355666554 79999999987442 223333445555677765543

>PRK13403 ketol-acid reductoisomerase; Provisional

Probab=94.96  E-value=0.24  Score=45.23  Aligned_cols=88  Identities=19%  Similarity=0.226  Sum_probs=60.9

Q ss_pred             CCCCEEEEEcCChHHHHHHHHHHHcCCeEEEEeCCchhHHHHHHHcCCCEEecCCCHHHHHHhcCCccEEEEcCCCccc-
Q 018067          182 KPGMHVGVVGLGGLGHVAVKFAKAMGVKVTVISTSPSKKSEAIERLGADSFLVSRDQDEMQAAMGTMDGIIDTVSAVHP-  260 (361)
Q Consensus       182 ~~g~~vlV~Gag~vG~~a~~la~~~g~~vi~~~~~~~~~~~~~~~~g~~~vv~~~~~~~~~~~~~g~d~vid~~g~~~~-  260 (361)
                      -.|++|.|+|-|.+|...++.++..|.+|++..+... ....++..|+.. .      .+.++....|+|+-++..+.. 
T Consensus        14 LkgKtVGIIG~GsIG~amA~nL~d~G~~ViV~~r~~~-s~~~A~~~G~~v-~------sl~Eaak~ADVV~llLPd~~t~   85 (335)
T PRK13403         14 LQGKTVAVIGYGSQGHAQAQNLRDSGVEVVVGVRPGK-SFEVAKADGFEV-M------SVSEAVRTAQVVQMLLPDEQQA   85 (335)
T ss_pred             hCcCEEEEEeEcHHHHHHHHHHHHCcCEEEEEECcch-hhHHHHHcCCEE-C------CHHHHHhcCCEEEEeCCChHHH
Confidence            4689999999999999999999999999998876533 333345556532 1      234555678999988875432 


Q ss_pred             --H-HHHHhccccCCEEEEe
Q 018067          261 --L-MPLIGLLKSQGKLVLV  277 (361)
Q Consensus       261 --~-~~~~~~l~~~G~~v~~  277 (361)
                        + ...+..++++..++..
T Consensus        86 ~V~~~eil~~MK~GaiL~f~  105 (335)
T PRK13403         86 HVYKAEVEENLREGQMLLFS  105 (335)
T ss_pred             HHHHHHHHhcCCCCCEEEEC
Confidence              1 2345667776655544

>PRK08936 glucose-1-dehydrogenase; Provisional

Probab=94.95  E-value=0.16  Score=45.15  Aligned_cols=76  Identities=20%  Similarity=0.209  Sum_probs=50.8

Q ss_pred             CCCCEEEEEcC-ChHHHHHHHHHHHcCCeEEEEeCCchh-HHHHHH---HcCCC---EEecCCCHHHHHHh-------cC
Q 018067          182 KPGMHVGVVGL-GGLGHVAVKFAKAMGVKVTVISTSPSK-KSEAIE---RLGAD---SFLVSRDQDEMQAA-------MG  246 (361)
Q Consensus       182 ~~g~~vlV~Ga-g~vG~~a~~la~~~g~~vi~~~~~~~~-~~~~~~---~~g~~---~vv~~~~~~~~~~~-------~~  246 (361)
                      -+++++||.|+ |.+|..+++.+...|++|+++.++++. ...+.+   ..+..   ...|..+.+.+.++       .+
T Consensus         5 ~~~k~~lItGa~~gIG~~ia~~l~~~G~~vvi~~~~~~~~~~~~~~~l~~~~~~~~~~~~Dl~~~~~i~~~~~~~~~~~g   84 (261)
T PRK08936          5 LEGKVVVITGGSTGLGRAMAVRFGKEKAKVVINYRSDEEEANDVAEEIKKAGGEAIAVKGDVTVESDVVNLIQTAVKEFG   84 (261)
T ss_pred             CCCCEEEEeCCCChHHHHHHHHHHHCCCEEEEEeCCCHHHHHHHHHHHHHcCCeEEEEEecCCCHHHHHHHHHHHHHHcC
Confidence            35789999997 999999999999999999888775432 222222   23332   12355555433332       24


Q ss_pred             CccEEEEcCCC
Q 018067          247 TMDGIIDTVSA  257 (361)
Q Consensus       247 g~d~vid~~g~  257 (361)
                      ++|++++++|.
T Consensus        85 ~id~lv~~ag~   95 (261)
T PRK08936         85 TLDVMINNAGI   95 (261)
T ss_pred             CCCEEEECCCC
Confidence            69999999985

>PRK14031 glutamate dehydrogenase; Provisional

Probab=94.95  E-value=0.38  Score=46.11  Aligned_cols=43  Identities=26%  Similarity=0.285  Sum_probs=35.5

Q ss_pred             hHhhhcCCCCCCCEEEEEcCChHHHHHHHHHHHcCCeEEEEeC
Q 018067          173 SPLRFYGLDKPGMHVGVVGLGGLGHVAVKFAKAMGVKVTVIST  215 (361)
Q Consensus       173 ~~l~~~~~~~~g~~vlV~Gag~vG~~a~~la~~~g~~vi~~~~  215 (361)
                      .++...+.--.|.+|+|.|.|.+|..+++.+...|++|+++.+
T Consensus       217 ~~~~~~g~~l~g~rVaVQGfGNVG~~aA~~L~e~GAkVVaVSD  259 (444)
T PRK14031        217 EMLKTKGTDLKGKVCLVSGSGNVAQYTAEKVLELGGKVVTMSD  259 (444)
T ss_pred             HHHHhcCCCcCCCEEEEECCCHHHHHHHHHHHHCCCEEEEEEC
Confidence            3444444334789999999999999999999999999998776

>COG2084 MmsB 3-hydroxyisobutyrate dehydrogenase and related beta-hydroxyacid dehydrogenases [Lipid metabolism]

Probab=94.94  E-value=0.19  Score=45.19  Aligned_cols=90  Identities=21%  Similarity=0.259  Sum_probs=64.7

Q ss_pred             EEEEEcCChHHHHHHHHHHHcCCeEEEEeCCchhHHHHHHHcCCCEEecCCCHHHHHHhcCCccEEEEcCCCcccHHH--
Q 018067          186 HVGVVGLGGLGHVAVKFAKAMGVKVTVISTSPSKKSEAIERLGADSFLVSRDQDEMQAAMGTMDGIIDTVSAVHPLMP--  263 (361)
Q Consensus       186 ~vlV~Gag~vG~~a~~la~~~g~~vi~~~~~~~~~~~~~~~~g~~~vv~~~~~~~~~~~~~g~d~vid~~g~~~~~~~--  263 (361)
                      +|.++|.|.+|.-.++-+...|..|.+.++++++-.+..+..|+...   ..   ..+.....|+||-++++...+..  
T Consensus         2 kIafIGLG~MG~pmA~~L~~aG~~v~v~~r~~~ka~~~~~~~Ga~~a---~s---~~eaa~~aDvVitmv~~~~~V~~V~   75 (286)
T COG2084           2 KIAFIGLGIMGSPMAANLLKAGHEVTVYNRTPEKAAELLAAAGATVA---AS---PAEAAAEADVVITMLPDDAAVRAVL   75 (286)
T ss_pred             eEEEEcCchhhHHHHHHHHHCCCEEEEEeCChhhhhHHHHHcCCccc---CC---HHHHHHhCCEEEEecCCHHHHHHHH
Confidence            57889999999999999999999999999999885555567787542   11   13344568888888887543433  


Q ss_pred             -----HHhccccCCEEEEecCCC
Q 018067          264 -----LIGLLKSQGKLVLVGAPE  281 (361)
Q Consensus       264 -----~~~~l~~~G~~v~~g~~~  281 (361)
                           ....++++..+|+++..+
T Consensus        76 ~g~~g~~~~~~~G~i~IDmSTis   98 (286)
T COG2084          76 FGENGLLEGLKPGAIVIDMSTIS   98 (286)
T ss_pred             hCccchhhcCCCCCEEEECCCCC
Confidence                 334456777788777543

---

Homologous Structure Templates

Structure Templates Detected by BLAST

Original result of BLAST against Protein Data Bank

ID	Length	Definition	E-value
Query	361
1yqd_A	366	Sinapyl Alcohol Dehydrogenase Complexed With Nadp+		1e-160
2cf5_A	357	Crystal Structures Of The Arabidopsis Cinnamyl Alco		6e-84
1uuf_A	369	Crystal Structure Of A Zinc-Type Alcohol Dehydrogen		1e-80
3two_A	348	The Crystal Structure Of Cad From Helicobacter Pylo		3e-68
1ps0_A	360	Crystal Structure Of The Nadp(H)-Dependent Cinnamyl		2e-50
3s1l_A	340	Crystal Structure Of Apo-Form Furx Length = 340		5e-41
1rjw_A	339	Crystal Structure Of Nad(+)-Dependent Alcohol Dehyd		2e-40
3pii_A	339	Crystal Structure Of Mutant Of Ht- Alcohol Dehydrog		3e-40
1llu_A	342	The Ternary Complex Of Pseudomonas Aeruginosa Alcoh		5e-37
3meq_A	365	Crystal Structure Of Alcohol Dehydrogenase From Bru		2e-33
2hcy_A	347	Yeast Alcohol Dehydrogenase I, Saccharomyces Cerevi		4e-32
4eex_A	348	Crystal Structure Of Lactococcus Lactis Alcohol Deh		4e-27
4eez_A	348	Crystal Structure Of Lactococcus Lactis Alcohol Deh		8e-27
1h2b_A	359	Crystal Structure Of The Alcohol Dehydrogenase From		1e-21
2h6e_A	344	Crystal Structure Of The D-Arabinose Dehydrogenase		3e-17
2eer_A	347	Structural Study Of Project Id St2577 From Sulfolob		1e-15
1r37_A	347	Alcohol Dehydrogenase From Sulfolobus Solfataricus		2e-15
3i4c_A	347	Crystal Structure Of Sulfolobus Solfataricus Adh(Ss		2e-15
1nto_A	347	N249y Mutant Of Alcohol Dehydrogenase From The Arch		3e-15
1jvb_A	347	Alcohol Dehydrogenase From The Archaeon Sulfolobus		6e-14
3uko_A	378	Crystal Structure Of S-Nitrosoglutathione Reductase		8e-13
2xaa_A	345	Alcohol Dehydrogenase Adh-'a' From Rhodococcus Rube		5e-12
4dl9_A	396	Crystal Structure Of S-nitrosoglutathione Reductase		1e-11
1hdy_A	374	Three-Dimensional Structures Of Three Human Alcohol		2e-11
1ht0_A	374	Human Gamma-2 Alcohol Dehydrogense Length = 374		2e-11
1agn_A	373	X-Ray Structure Of Human Sigma Alcohol Dehydrogenas		3e-11
1d1t_A	373	Mutant Of Human Sigma Alcohol Dehydrogenase With Le		3e-11
1hso_A	374	Human Alpha Alcohol Dehydrogenase (Adh1a) Length =		1e-10
1hdx_A	374	Three-Dimensional Structures Of Three Human Alcohol		2e-10
1htb_A	374	Crystallization Of Human Beta3 Alcohol Dehydrogenas		2e-10
1hdz_A	374	Three-Dimensional Structures Of Three Human Alcohol		3e-10
4ej6_A	370	Crystal Structure Of A Putative Zinc-Binding Dehydr		3e-10
1vj0_A	380	Crystal Structure Of Alcohol Dehydrogenase (Tm0436)		8e-10
1cdo_A	374	Alcohol Dehydrogenase (E.C.1.1.1.1) (Ee Isozyme) Co		8e-10
1f8f_A	371	Crystal Structure Of Benzyl Alcohol Dehydrogenase F		1e-09
1p0c_A	373	Crystal Structure Of The Nadp(H)-Dependent Vertebra		2e-09
4ilk_A	359	Crystal Structure Of Short Chain Alcohol Dehydrogen		7e-09
1ee2_B	373	The Structure Of Steroid-Active Alcohol Dehydrogena		9e-09
1ee2_A	373	The Structure Of Steroid-Active Alcohol Dehydrogena		1e-08
1e3l_A	376	P47h Mutant Of Mouse Class Ii Alcohol Dehydrogenase		1e-08
1e3j_A	352	Ketose Reductase (Sorbitol Dehydrogenase) From Silv		1e-08
1axg_A	374	Crystal Structure Of The Val203->ala Mutant Of Live		2e-08
1a71_A	374	Ternary Complex Of An Active Site Double Mutant Of		2e-08
6adh_A	374	Structure Of Triclinic Ternary Complex Of Horse Liv		3e-08
1axe_A	374	Crystal Structure Of The Active-Site Mutant Phe93->		3e-08
3oq6_A	374	Horse Liver Alcohol Dehydrogenase A317c Mutant Comp		4e-08
1mgo_A	374	Horse Liver Alcohol Dehydrogenase Phe93ala Mutant L		4e-08
1n8k_A	374	Horse Liver Alcohol Dehydrogenase Val292thr Mutant		9e-08
1ju9_A	374	Horse Liver Alcohol Dehydrogenase Val292ser Mutant		1e-07
1e3e_A	376	Mouse Class Ii Alcohol Dehydrogenase Complex With N		2e-07
3cos_A	381	Crystal Structure Of Human Class Ii Alcohol Dehydro		2e-07
1qv6_A	374	Horse Liver Alcohol Dehydrogenase His51glnLYS228ARG		2e-07
1teh_A	373	Structure Of Human Liver Chichi Alcohol Dehydrogena		3e-07
1mc5_A	374	Ternary Complex Of Human Glutathione-Dependent Form		3e-07
3qj5_A	374	S-Nitrosoglutathione Reductase (Gsnor) In Complex W		3e-07
1qlh_A	374	Horse Liver Alcohol Dehydrogenase Complexed To Nad		3e-07
3gfb_A	350	L-Threonine Dehydrogenase (Tktdh) From The Hyperthe		4e-07
2dq4_A	343	Crystal Structure Of Threonine 3-Dehydrogenase Leng		6e-07
2dfv_A	347	Hyperthermophilic Threonine Dehydrogenase From Pyro		7e-07
2d8a_A	348	Crystal Structure Of Ph0655 From Pyrococcus Horikos		7e-07
4a2c_A	346	Crystal Structure Of Galactitol-1-Phosphate Dehydro		2e-06
3jyl_A	325	Crystal Structures Of Pseudomonas Syringae Pv. Toma		2e-06
2fzw_A	373	Structure Of The Binary Complex Of The E67l Mutant		2e-06
3fpl_A	351	Chimera Of Alcohol Dehydrogenase By Exchange Of The		4e-06
3uog_A	363	Crystal Structure Of Putative Alcohol Dehydrogenase		5e-06
1kol_A	398	Crystal Structure Of Formaldehyde Dehydrogenase Len		6e-06
1ped_A	351	Bacterial Secondary Alcohol Dehydrogenase (Apo-Form		6e-06
1jqb_A	351	Alcohol Dehydrogenase From Clostridium Beijerinckii		6e-06
2b83_A	351	A Single Amino Acid Substitution In The Clostridium		1e-05
3ip1_A	404	Structure Of Putative Alcohol Dehydrogenase (Tm_042		1e-05
1pl7_A	356	Human Sorbitol Dehydrogenase (Apo) Length = 356		1e-05
3qe3_A	355	Sheep Liver Sorbitol Dehydrogenase Length = 355		2e-05
2dph_A	398	Crystal Structure Of Formaldehyde Dismutase Length		5e-05
3m6i_A	363	L-Arabinitol 4-Dehydrogenase Length = 363		7e-05
1pl6_A	356	Human SdhNADHINHIBITOR COMPLEX Length = 356		3e-04
1yb5_A	351	Crystal Structure Of Human Zeta-crystallin With Bou		4e-04

>pdb|1YQD|A Chain A, Sinapyl Alcohol Dehydrogenase Complexed With Nadp+ Length = 366

Iteration: 1
 Score =  560 bits (1443), Expect = e-160,   Method: Compositional matrix adjust.
 Identities = 264/360 (73%), Positives = 304/360 (84%)
Query: 1   MGQAPEQEHPKNAFGWAAKDTSGVLSPFHFSRRATGEKDVTFKVTHCGICHSDLHMIKNE 60
           M ++PE+EHP  AFGWAA+D SG LSPF+FSRRATGE+DV FKV +CG+CHSDLH IKN+
Sbjct: 5   MSKSPEEEHPVKAFGWAARDQSGHLSPFNFSRRATGEEDVRFKVLYCGVCHSDLHSIKND 64
Query: 61  WGNTIYPIVPGHEIVGVVTEVGSKVSKFKVGDKVGVGCMVGSCRSCDSCAIDLENYCPKV 120
           WG ++YP+VPGHEIVG VTEVGSKV K  VGDKVGVGC+VG+C SC+SCA DLENYCPK+
Sbjct: 65  WGFSMYPLVPGHEIVGEVTEVGSKVKKVNVGDKVGVGCLVGACHSCESCANDLENYCPKM 124
Query: 121 IMTYANKYHDGTITYGGYSDIMVADEHFVVRIPEGTPLDATAPLLCAGITVYSPLRFYGL 180
           I+TYA+ YHDGTITYGGYS+ MVA+E +++R P+  PLD  APLLCAGITVYSPL+++GL
Sbjct: 125 ILTYASIYHDGTITYGGYSNHMVANERYIIRFPDNMPLDGGAPLLCAGITVYSPLKYFGL 184
Query: 181 DKPGMXXXXXXXXXXXXXXXKFAKAMGVKVTVISTSPSKKSEAIERLGADSFLVSRDQDE 240
           D+PG                KFAKA G KVTVISTSPSKK EA++  GADSFLVSRDQ++
Sbjct: 185 DEPGKHIGIVGLGGLGHVAVKFAKAFGSKVTVISTSPSKKEEALKNFGADSFLVSRDQEQ 244
Query: 241 MQAAMGTMDGIIDTVSAVHPLMPLIGLLKSQGKLVLVGAPEKPLELPAFSLLMGRKIVGG 300
           MQAA GT+DGIIDTVSAVHPL+PL GLLKS GKL+LVGAPEKPLELPAFSL+ GRKIV G
Sbjct: 245 MQAAAGTLDGIIDTVSAVHPLLPLFGLLKSHGKLILVGAPEKPLELPAFSLIAGRKIVAG 304
Query: 301 SMIGGMKETQEMIDFAAKHNIRADIEVIPADYVNTALERLAKADVRYRFVIDVANTMKST 360
           S IGGMKETQEMIDFAAKHNI ADIEVI  DY+NTA+ERLAK DVRYRFVIDV NT+ +T
Sbjct: 305 SGIGGMKETQEMIDFAAKHNITADIEVISTDYLNTAMERLAKNDVRYRFVIDVGNTLAAT 364

>pdb|2CF5|A Chain A, Crystal Structures Of The Arabidopsis Cinnamyl Alcohol Dehydrogenases, Atcad5 Length = 357

Iteration: 1
 Score =  307 bits (786), Expect = 6e-84,   Method: Compositional matrix adjust.
 Identities = 174/346 (50%), Positives = 229/346 (66%)
Query: 8   EHPKNAFGWAAKDTSGVLSPFHFSRRATGEKDVTFKVTHCGICHSDLHMIKNEWGNTIYP 67
           E  +   GWAA+D SG+LSP+ ++ R TG +DV  ++  CGICH+DLH  KN+ G + YP
Sbjct: 5   EAERKTTGWAARDPSGILSPYTYTLRETGPEDVNIRIICCGICHTDLHQTKNDLGMSNYP 64
Query: 68  IVPGHEIVGVVTEVGSKVSKFKVGDKVGVGCMVGSCRSCDSCAIDLENYCPKVIMTYANK 127
           +VPGHE+VG V EVGS VSKF VGD VGVGC+VG C  C  C  DLE YCPK I +Y + 
Sbjct: 65  MVPGHEVVGEVVEVGSDVSKFTVGDIVGVGCLVGCCGGCSPCERDLEQYCPKKIWSYNDV 124
Query: 128 YHDGTITYGGYSDIMVADEHFVVRIPEGTPLDATAPLLCAGITVYSPLRFYGLDKPGMXX 187
           Y +G  T GG++   V  + FVV+IPEG  ++  APLLCAG+TVYSPL  +GL +PG+  
Sbjct: 125 YINGQPTQGGFAKATVVHQKFVVKIPEGMAVEQAAPLLCAGVTVYSPLSHFGLKQPGLRG 184
Query: 188 XXXXXXXXXXXXXKFAKAMGVKVTVISTSPSKKSEAIERLGADSFLVSRDQDEMQAAMGT 247
                        K AKAMG  VTVIS+S  K+ EA++ LGAD +++  DQ +M     +
Sbjct: 185 GILGLGGVGHMGVKIAKAMGHHVTVISSSNKKREEALQDLGADDYVIGSDQAKMSELADS 244
Query: 248 MDGIIDTVSAVHPLMPLIGLLKSQGKLVLVGAPEKPLELPAFSLLMGRKIVGGSMIGGMK 307
           +D +IDTV   H L P + LLK  GKL+L+G    PL+     L++GRK++ GS IG MK
Sbjct: 245 LDYVIDTVPVHHALEPYLSLLKLDGKLILMGVINNPLQFLTPLLMLGRKVITGSFIGSMK 304
Query: 308 ETQEMIDFAAKHNIRADIEVIPADYVNTALERLAKADVRYRFVIDV 353
           ET+EM++F  +  + + IEV+  DYVNTA ERL K DVRYRFV+DV
Sbjct: 305 ETEEMLEFCKEKGLSSIIEVVKMDYVNTAFERLEKNDVRYRFVVDV 350

>pdb|1UUF|A Chain A, Crystal Structure Of A Zinc-Type Alcohol Dehydrogenase-Like Protein Yahk Length = 369

Iteration: 1
 Score =  296 bits (758), Expect = 1e-80,   Method: Compositional matrix adjust.
 Identities = 159/331 (48%), Positives = 204/331 (61%), Gaps = 5/331 (1%)
Query: 25  LSPFHFSRRATGEKDVTFKVTHCGICHSDLHMIKNEWGNTIYPIVPGHEIVGVVTEVGSK 84
           L P   +RR  G  DV  ++ +CG+CHSDLH +++EW  T+YP VPGHEIVG V  VG +
Sbjct: 35  LEPMDITRREPGPNDVKIEIAYCGVCHSDLHQVRSEWAGTVYPCVPGHEIVGRVVAVGDQ 94
Query: 85  VSKFKVGDKVGVGCMVGSCRSCDSCAIDLENYCPKVIMTYANKYHDGT-ITYGGYSDIMV 143
           V K+  GD VGVGC+V SC+ C+ C   LENYC  +  TY +   D    T GGYS  +V
Sbjct: 95  VEKYAPGDLVGVGCIVDSCKHCEECEDGLENYCDHMTGTYNSPTPDEPGHTLGGYSQQIV 154
Query: 144 ADEHFVVRIPE-GTPLDATAPLLCAGITVYSPLRFYGLDKPGMXXXXXXXXXXXXXXXKF 202
             E +V+RI      L A APLLCAGIT YSPLR +    PG                K 
Sbjct: 155 VHERYVLRIRHPQEQLAAVAPLLCAGITTYSPLRHWQA-GPGKKVGVVGIGGLGHMGIKL 213
Query: 203 AKAMGVKVTVISTSPSKKSEAIERLGADSFLVSRDQDEMQAAMGTMDGIIDTVSAVHPLM 262
           A AMG  V   +TS +K+ EA + LGAD  + SR+ DEM A + + D I++TV+A H L 
Sbjct: 214 AHAMGAHVVAFTTSEAKR-EAAKALGADEVVNSRNADEMAAHLKSFDFILNTVAAPHNLD 272
Query: 263 PLIGLLKSQGKLVLVGAPEKPLELP-AFSLLMGRKIVGGSMIGGMKETQEMIDFAAKHNI 321
               LLK  G + LVGAP  P + P  F+L+M R+ + GSMIGG+ ETQEM+DF A+H I
Sbjct: 273 DFTTLLKRDGTMTLVGAPATPHKSPEVFNLIMKRRAIAGSMIGGIPETQEMLDFCAEHGI 332
Query: 322 RADIEVIPADYVNTALERLAKADVRYRFVID 352
            ADIE+I AD +N A ER+ + DV+YRFVID
Sbjct: 333 VADIEMIRADQINEAYERMLRGDVKYRFVID 363

>pdb|3TWO|A Chain A, The Crystal Structure Of Cad From Helicobacter Pylori Complexed With Nadp(H) Length = 348

Iteration: 1
 Score =  255 bits (651), Expect = 3e-68,   Method: Compositional matrix adjust.
 Identities = 139/350 (39%), Positives = 199/350 (56%), Gaps = 16/350 (4%)
Query: 15  GWAAKDTSGVLSPFHFSRRATGEKDVTFKVTHCGICHSDLHMIKNEWGNTIYPIVPGHEI 74
           G+A         P  FSR A G +DV   + + GICHSD+H   +EW   IYP++PGHEI
Sbjct: 7   GFAIFSKDEHFKPHDFSRHAVGPRDVLIDILYAGICHSDIHSAYSEWKEGIYPMIPGHEI 66
Query: 75  VGVVTEVGSKVSKFKVGDKVGVGCMVGSCRSCDSCAIDLENYCPKVIMTY--ANKYHDGT 132
            G++ EVG  V KFK+GD VGVGC V SC++C  C    E +C KV+ TY   + +HD  
Sbjct: 67  AGIIKEVGKGVKKFKIGDVVGVGCFVNSCKACKPCKEHQEQFCTKVVFTYDCLDSFHDNE 126
Query: 133 ITYGGYSDIMVADEHFVVRIPEGTPLDATAPLLCAGITVYSPLRFYGLDKPGMXXXXXXX 192
              GGYS+ +V DE++V+ + +  PL+  APLLCAGIT YSPL+F  + K G        
Sbjct: 127 PHMGGYSNNIVVDENYVISVDKNAPLEKVAPLLCAGITTYSPLKFSKVTK-GTKVGVAGF 185
Query: 193 XXXXXXXXKFAKAMGVKVTVISTSPSKKSEAIERLGADSFLVSRDQDEMQAAMGTMDGII 252
                   K+A AMG +V+V + +  KK +A+  +G   F     Q + +     +D II
Sbjct: 186 GGLGSMAVKYAVAMGAEVSVFARNEHKKQDALS-MGVKHFYTDPKQCKEE-----LDFII 239
Query: 253 DTVSAVHPLMPLIGLLKSQGKLVLVGAPEKPLEL-PAFSLL----MGRKIVGGSMIGGMK 307
            T+   + L   + LL   G L LVG P  P+E+ P  S+     +G + V GS+IGG+K
Sbjct: 240 STIPTHYDLKDYLKLLTYNGDLALVGLP--PVEVAPVLSVFDFIHLGNRKVYGSLIGGIK 297
Query: 308 ETQEMIDFAAKHNIRADIEVIPADYVNTALERLAKADVRYRFVIDVANTM 357
           ETQEM+DF+ KHNI  +I++I    ++TA   L     ++R+VID+  + 
Sbjct: 298 ETQEMVDFSIKHNIYPEIDLILGKDIDTAYHNLTHGKAKFRYVIDMKKSF 347

>pdb|1PS0|A Chain A, Crystal Structure Of The Nadp(H)-Dependent Cinnamyl Alcohol Dehydrogenase From Saccharomyces Cerevisiae Length = 360

Iteration: 1
 Score =  196 bits (498), Expect = 2e-50,   Method: Compositional matrix adjust.
 Identities = 121/330 (36%), Positives = 174/330 (52%), Gaps = 26/330 (7%)
Query: 37  EKDVTFKVTHCGICHSDLHMIKNEWGNTIYPIVPGHEIVGVVTEVGSKV-SKFKVGDKVG 95
           + D+  K+  CG+C SD+H     WGN   P+V GHEIVG V ++G K  S  KVG +VG
Sbjct: 33  DHDIDIKIEACGVCGSDIHCAAGHWGNMKMPLVVGHEIVGKVVKLGPKSNSGLKVGQRVG 92
Query: 96  VGCMVGSCRSCDSCAIDLENYCPKVIMTYANKYHDGTITYGGYSDIMVADEHFVVRIPEG 155
           VG  V SC  CD C  D E YC K + TY+  Y DG ++ GGY++ +   EHFVV IPE 
Sbjct: 93  VGAQVFSCLECDRCKNDNEPYCTKFVTTYSQPYEDGYVSQGGYANYVRVHEHFVVPIPEN 152
Query: 156 TPLDATAPLLCAGITVYSPLRFYGLDKPGMXXXXXXXXXXXXXXXKFAKAMGVKVTVIST 215
            P    APLLC G+TVYSPL   G   PG                  +KAMG +  VIS 
Sbjct: 153 IPSHLAAPLLCGGLTVYSPLVRNGCG-PGKKVGIVGLGGIGSMGTLISKAMGAETYVISR 211
Query: 216 SPSKKSEAIERLGADSFLVSRDQ-DEMQAAMGTMDGIIDTVSAV----HPLMPLIGLLKS 270
           S  K+ +A+ ++GAD ++ + ++ D  +    T D I+   S++      +MP    +K 
Sbjct: 212 SSRKREDAM-KMGADHYIATLEEGDWGEKYFDTFDLIVVCASSLTDIDFNIMP--KAMKV 268
Query: 271 QGKLVLVGAPE-------KPLELPAFSLLMGRKIVGGSMIGGMKETQEMIDFAAKHNIRA 323
            G++V +  PE       KP  L A S       +  S +G +KE  +++   ++ +I+ 
Sbjct: 269 GGRIVSISIPEQHEMLSLKPYGLKAVS-------ISYSALGSIKELNQLLKLVSEKDIKI 321
Query: 324 DIEVIPADY--VNTALERLAKADVRYRFVI 351
            +E +P     V+ A ER+ K DVRYRF +
Sbjct: 322 WVETLPVGEAGVHEAFERMEKGDVRYRFTL 351

>pdb|3S1L|A Chain A, Crystal Structure Of Apo-Form Furx Length = 340

Iteration: 1
 Score =  164 bits (416), Expect = 5e-41,   Method: Compositional matrix adjust.
 Identities = 101/324 (31%), Positives = 159/324 (49%), Gaps = 13/324 (4%)
Query: 36  GEKDVTFKVTHCGICHSDLHMIKNEWG-NTIYPIVPGHEIVGVVTEVGSKVSKFKVGDKV 94
           G   V  K+   G+CH+DLH    +W      P +PGHE VG V+ VGS VS+ K GD+V
Sbjct: 26  GPGQVQVKIEASGVCHTDLHAADGDWPVKPTLPFIPGHEGVGYVSAVGSGVSRVKEGDRV 85
Query: 95  GVGCMVGSCRSCDSCAIDLENYCPKVIMTYANKYHDGTITYGGYSDIMVADEHFVVRIPE 154
           GV  +  +C  C+ C    E  C K       + + G    GGY + +VAD ++V  +P+
Sbjct: 86  GVPWLYSACGYCEHCLQGWETLCEK-------QQNTGYSVNGGYGEYVVADPNYVGLLPD 138
Query: 155 GTPLDATAPLLCAGITVYSPLRFYGLDKPGMXXXXXXXXXXXXXXXKFAKAMGVKVTVIS 214
                  AP+LCAG+TVY  L+     +PG                ++A+AMG++V  + 
Sbjct: 139 KVGFVEIAPILCAGVTVYKGLKVTDT-RPGQWVVISGIGGLGHVAVQYARAMGLRVAAVD 197
Query: 215 TSPSKKSEAIERLGADSFLVSRDQDE---MQAAMGTMDGIIDTVSAVHPLMPLIGLLKSQ 271
              +K + A  RLGA+  + +RD D    +Q  +G   G++ T  +       IG+++  
Sbjct: 198 IDDAKLNLA-RRLGAEVAVNARDTDPAAWLQKEIGGAHGVLVTAVSPKAFSQAIGMVRRG 256
Query: 272 GKLVLVGAPEKPLELPAFSLLMGRKIVGGSMIGGMKETQEMIDFAAKHNIRADIEVIPAD 331
           G + L G P      P F +++    + GS++G   + QE +DFAA  +++A +     D
Sbjct: 257 GTIALNGLPPGDFGTPIFDVVLKGITIRGSIVGTRSDLQESLDFAAHGDVKATVSTAKLD 316
Query: 332 YVNTALERLAKADVRYRFVIDVAN 355
            VN    RL +  V  R V+D + 
Sbjct: 317 DVNDVFGRLREGKVEGRVVLDFSR 340

>pdb|1RJW|A Chain A, Crystal Structure Of Nad(+)-Dependent Alcohol Dehydrogenase From Bacillus Stearothermophilus Strain Lld-R Length = 339

Iteration: 1
 Score =  162 bits (411), Expect = 2e-40,   Method: Compositional matrix adjust.
 Identities = 100/322 (31%), Positives = 162/322 (50%), Gaps = 15/322 (4%)
Query: 39  DVTFKVTHCGICHSDLHMIKNEWG-NTIYPIVPGHEIVGVVTEVGSKVSKFKVGDKVGVG 97
           +V  ++  CG+CH+DLH    +W      P++PGHE VG+V EVG  V+  KVGD+VG+ 
Sbjct: 27  EVLVRIKACGVCHTDLHAAHGDWPVKPKLPLIPGHEGVGIVEEVGPGVTHLKVGDRVGIP 86
Query: 98  CMVGSCRSCDSCAIDLENYCPKVIMTYANKYHDGTITYGGYSDIMVADEHFVVRIPEGTP 157
            +  +C  CD C    E  C        ++ + G    GGY++   A   +VV+IP+   
Sbjct: 87  WLYSACGHCDYCLSGQETLC-------EHQKNAGYSVDGGYAEYCRAAADYVVKIPDNLS 139
Query: 158 LDATAPLLCAGITVYSPLRFYGLDKPGMXXXXXXXXXXXXXXXKFAKAMGVKVTVISTSP 217
            +  AP+ CAG+T Y  L+  G  KPG                ++AKAMG+ V  +    
Sbjct: 140 FEEAAPIFCAGVTTYKALKVTGA-KPGEWVAIYGIGGLGHVAVQYAKAMGLNVVAVDIG- 197
Query: 218 SKKSEAIERLGADSFLVSRDQDE---MQAAMGTMDGIIDTVSAVHPLMPLIGLLKSQGKL 274
            +K E  + LGAD  +    +D    M+  +G +   + T  +          ++  G  
Sbjct: 198 DEKLELAKELGADLVVNPLKEDAAKFMKEKVGGVHAAVVTAVSKPAFQSAYNSIRRGGAC 257
Query: 275 VLVGAPEKPLELPAF-SLLMGRKIVGGSMIGGMKETQEMIDFAAKHNIRADIEVIPADYV 333
           VLVG P + + +P F ++L G KI+ GS++G  K+ QE + FAA+  ++  IEV P + +
Sbjct: 258 VLVGLPPEEMPIPIFDTVLNGIKII-GSIVGTRKDLQEALQFAAEGKVKTIIEVQPLEKI 316
Query: 334 NTALERLAKADVRYRFVIDVAN 355
           N   +R+ K  +  R V+ + +
Sbjct: 317 NEVFDRMLKGQINGRVVLTLED 338

>pdb|3PII|A Chain A, Crystal Structure Of Mutant Of Ht- Alcohol Dehydrogenase With Substrate Analogue Butyramide Length = 339

Iteration: 1
 Score =  162 bits (410), Expect = 3e-40,   Method: Compositional matrix adjust.
 Identities = 100/322 (31%), Positives = 162/322 (50%), Gaps = 15/322 (4%)
Query: 39  DVTFKVTHCGICHSDLHMIKNEWG-NTIYPIVPGHEIVGVVTEVGSKVSKFKVGDKVGVG 97
           +V  ++  CG+CH+DLH    +W      P++PGHE VG+V EVG  V+  KVGD+VG+ 
Sbjct: 27  EVLVRIKACGVCHTDLHAAHGDWPVKPKLPLIPGHEGVGIVEEVGPGVTHLKVGDRVGIP 86
Query: 98  CMVGSCRSCDSCAIDLENYCPKVIMTYANKYHDGTITYGGYSDIMVADEHFVVRIPEGTP 157
            +  +C  CD C    E  C        ++ + G    GGY++   A   +VV+IP+   
Sbjct: 87  WLYSACGHCDYCLSGQETLC-------EHQKNAGYSVDGGYAEYCRAAADYVVKIPDNLS 139
Query: 158 LDATAPLLCAGITVYSPLRFYGLDKPGMXXXXXXXXXXXXXXXKFAKAMGVKVTVISTSP 217
            +  AP+ CAG+T Y  L+  G  KPG                ++AKAMG+ V  +    
Sbjct: 140 FEEAAPIFCAGVTTYKALKVTGA-KPGEWVAIYGIGGFGHVAVQYAKAMGLNVVAVDIG- 197
Query: 218 SKKSEAIERLGADSFLVSRDQDE---MQAAMGTMDGIIDTVSAVHPLMPLIGLLKSQGKL 274
            +K E  + LGAD  +    +D    M+  +G +   + T  +          ++  G  
Sbjct: 198 DEKLELAKELGADLVVNPLKEDAAKFMKEKVGGVHAAVVTAVSKPAFQSAYNSIRRGGAC 257
Query: 275 VLVGAPEKPLELPAF-SLLMGRKIVGGSMIGGMKETQEMIDFAAKHNIRADIEVIPADYV 333
           VLVG P + + +P F ++L G KI+ GS++G  K+ QE + FAA+  ++  IEV P + +
Sbjct: 258 VLVGLPPEEMPIPIFDTVLNGIKII-GSIVGTRKDLQEALQFAAEGKVKTIIEVQPLEKI 316
Query: 334 NTALERLAKADVRYRFVIDVAN 355
           N   +R+ K  +  R V+ + +
Sbjct: 317 NEVFDRMLKGQINGRVVLTLED 338

>pdb|1LLU|A Chain A, The Ternary Complex Of Pseudomonas Aeruginosa Alcohol Dehydrogenase With Its Coenzyme And Weak Substrate Length = 342

Iteration: 1
 Score =  151 bits (382), Expect = 5e-37,   Method: Compositional matrix adjust.
 Identities = 93/322 (28%), Positives = 157/322 (48%), Gaps = 13/322 (4%)
Query: 36  GEKDVTFKVTHCGICHSDLHMIKNEWG-NTIYPIVPGHEIVGVVTEVGSKVSKFKVGDKV 94
           G   V  K+   G+CH+DLH  + +W      P +PGHE VG V  VGS V++ K GD+V
Sbjct: 30  GPGQVLVKIEASGVCHTDLHAAEGDWPVKPPLPFIPGHEGVGYVAAVGSGVTRVKEGDRV 89
Query: 95  GVGCMVGSCRSCDSCAIDLENYCPKVIMTYANKYHDGTITYGGYSDIMVADEHFVVRIPE 154
           G+  +  +C  C+ C    E  C        ++ + G    GGY++ ++AD ++V  +P+
Sbjct: 90  GIPWLYTACGCCEHCLTGWETLC-------ESQQNTGYSVNGGYAEYVLADPNYVGILPK 142
Query: 155 GTPLDATAPLLCAGITVYSPLRFYGLDKPGMXXXXXXXXXXXXXXXKFAKAMGVKVTVIS 214
                  AP+LCAG+TVY  L+     +PG                ++A+AMG+ V  I 
Sbjct: 143 NVEFAEIAPILCAGVTVYKGLKQTNA-RPGQWVAISGIGGLGHVAVQYARAMGLHVAAID 201
Query: 215 TSPSKKSEAIERLGADSFLVSRDQDEMQAA---MGTMDGIIDTVSAVHPLMPLIGLLKSQ 271
                K E   +LGA   + +R +D ++A    +G   G++ T  +       IG+ +  
Sbjct: 202 ID-DAKLELARKLGASLTVNARQEDPVEAIQRDIGGAHGVLVTAVSNSAFGQAIGMARRG 260
Query: 272 GKLVLVGAPEKPLELPAFSLLMGRKIVGGSMIGGMKETQEMIDFAAKHNIRADIEVIPAD 331
           G + LVG P      P F +++    + GS++G   + QE +DFA +  ++A I     D
Sbjct: 261 GTIALVGLPPGDFPTPIFDVVLKGLHIAGSIVGTRADLQEALDFAGEGLVKATIHPGKLD 320
Query: 332 YVNTALERLAKADVRYRFVIDV 353
            +N  L+++    +  R V+++
Sbjct: 321 DINQILDQMRAGQIEGRIVLEM 342

>pdb|3MEQ|A Chain A, Crystal Structure Of Alcohol Dehydrogenase From Brucella Mel Length = 365

Iteration: 1
 Score =  139 bits (351), Expect = 2e-33,   Method: Compositional matrix adjust.
 Identities = 90/324 (27%), Positives = 154/324 (47%), Gaps = 15/324 (4%)
Query: 36  GEKDVTFKVTHCGICHSDLHMIKNEWG-NTIYPIVPGHEIVGVVTEVGSKVSKFKVGDKV 94
           G   +   +   G+CH+DLH  + +W      P +PGHE VG V+ VGS V   K GD+V
Sbjct: 49  GPGQIQVAIQASGVCHTDLHAAEGDWPVKPNPPFIPGHEGVGFVSAVGSGVKHVKEGDRV 108
Query: 95  GVGCMVGSCRSCDSCAIDLENYCPKVIMTYANKYHDGTITYGGYSDIMVADEHFVVRIPE 154
           G+  +  +C  C  C    E  C + + T       G    GG+++ +VAD +FV  +P+
Sbjct: 109 GIPWLYTACGHCRHCLGGWETLCEEQLNT-------GYSVNGGFAEYVVADPNFVGHLPK 161
Query: 155 GTPLDATAPLLCAGITVYSPLRFYGLDKPGMXXXXXXXXXXXXXXXKFAKAMGVKVTVIS 214
               +  AP+LCAG+TVY  L+     KPG                ++A+AMG+ V  + 
Sbjct: 162 NIDFNEIAPVLCAGVTVYKGLKVTDT-KPGDWVVISGIGGLGHMAVQYARAMGLNVAAVD 220
Query: 215 TSPSKKSEAIERLGADSFLVSRDQDEMQAAM-----GTMDGIIDTVSAVHPLMPLIGLLK 269
               +K +   RLGA   + ++   +  A +     G   G++ T  +       +G++ 
Sbjct: 221 ID-DRKLDLARRLGATVTVNAKTVADPAAYIRKETDGGAQGVLVTAVSPKAFEQALGMVA 279
Query: 270 SQGKLVLVGAPEKPLELPAFSLLMGRKIVGGSMIGGMKETQEMIDFAAKHNIRADIEVIP 329
             G + L G P     L  F++++    V GS++G   + QE +DFAA   ++A I+   
Sbjct: 280 RGGTVSLNGLPPGDFPLSIFNMVLNGVTVRGSIVGTRLDLQESLDFAADGKVKATIQTGK 339
Query: 330 ADYVNTALERLAKADVRYRFVIDV 353
            + +N   + + + ++  R V+D+
Sbjct: 340 LEDINAIFDDMRQGNIEGRIVMDL 363

>pdb|2HCY|A Chain A, Yeast Alcohol Dehydrogenase I, Saccharomyces Cerevisiae Fermentative Enzyme Length = 347

Iteration: 1
 Score =  135 bits (339), Expect = 4e-32,   Method: Compositional matrix adjust.
 Identities = 90/324 (27%), Positives = 155/324 (47%), Gaps = 15/324 (4%)
Query: 38  KDVTFKVTHCGICHSDLHMIKNEWGNTI-YPIVPGHEIVGVVTEVGSKVSKFKVGDKVGV 96
            ++   V + G+CH+DLH    +W   +  P+V GHE  GVV  +G  V  +K+GD  G+
Sbjct: 31  NELLINVKYSGVCHTDLHAWHGDWPLPVKLPLVGGHEGAGVVVGMGENVKGWKIGDYAGI 90
Query: 97  GCMVGSCRSCDSCAIDLENYCPKVIMTYANKYHDGTITYGGYSDIMVADEHFVVRIPEGT 156
             + GSC +C+ C +  E+ CP   ++     HDG+     +     AD      IP+GT
Sbjct: 91  KWLNGSCMACEYCELGNESNCPHADLS--GYTHDGS-----FQQYATADAVQAAHIPQGT 143
Query: 157 PLDATAPLLCAGITVYSPLRFYGLDKPGMXXXXXXXXXXXXXXXKFAKAMGVKVTVISTS 216
            L   AP+LCAGITVY  L+   L                    ++AKAMG +V  I   
Sbjct: 144 DLAQVAPILCAGITVYKALKSANLMAGHWVAISGAAGGLGSLAVQYAKAMGYRVLGIDGG 203
Query: 217 PSKKSEAIERLGADSFL-VSRDQDEMQAAMGTMD----GIIDTVSAVHPLMPLIGLLKSQ 271
             K+ E    +G + F+  ++++D + A +   D    G+I+   +   +      +++ 
Sbjct: 204 EGKE-ELFRSIGGEVFIDFTKEKDIVGAVLKATDGGAHGVINVSVSEAAIEASTRYVRAN 262
Query: 272 GKLVLVGAPEKPLELP-AFSLLMGRKIVGGSMIGGMKETQEMIDFAAKHNIRADIEVIPA 330
           G  VLVG P         F+ ++    + GS +G   +T+E +DF A+  +++ I+V+  
Sbjct: 263 GTTVLVGMPAGAKCCSDVFNQVVKSISIVGSYVGNRADTREALDFFARGLVKSPIKVVGL 322
Query: 331 DYVNTALERLAKADVRYRFVIDVA 354
             +    E++ K  +  R+V+D +
Sbjct: 323 STLPEIYEKMEKGQIVGRYVVDTS 346

>pdb|4EEX|A Chain A, Crystal Structure Of Lactococcus Lactis Alcohol Dehydrogenase Length = 348

Iteration: 1
 Score =  118 bits (296), Expect = 4e-27,   Method: Compositional matrix adjust.
 Identities = 89/330 (26%), Positives = 159/330 (48%), Gaps = 24/330 (7%)
Query: 33  RATGEKDVTFKVTHCGICHSDLHMIKNEWGNTIYPIVPGHEIVGVVTEVGSKVSKFKVGD 92
           RA    +    + +CG+CH+DLH+   ++GN    ++ GHE +G+V E+G+ VS  +VGD
Sbjct: 22  RAIKPNEALLDMEYCGVCHTDLHVAAGDYGNKAGTVL-GHEGIGIVKEIGADVSSLQVGD 80
Query: 93  KVGVGCMVGSCRSCDSCAIDLENYCPKVIMTYANKYHDGTITYGGYSD--IMVADEHFVV 150
           +V V      C  C+ C    E +C +V        + G    GG ++  I+VAD  + V
Sbjct: 81  RVSVAWFFEGCGHCEYCVSGNETFCREV-------KNAGYSVDGGMAEEAIVVAD--YAV 131
Query: 151 RIPEGT-PLDATAPLLCAGITVYSPLRFYGLDKPGMXXXXXXXXXXXXXXXKFAK-AMGV 208
           ++P+G  P++A++ + CAG+T Y  ++  G+ KPG                ++AK   G 
Sbjct: 132 KVPDGLDPIEASS-ITCAGVTTYKAIKVSGV-KPGDWQVIFGAGGLGNLAIQYAKNVFGA 189
Query: 209 KVTVISTSPSKKSEAIERLGADSFLVSRD---QDEMQ---AAMGTMDGIIDTVSAVHPLM 262
           KV  +  +  K + A +++GAD  + S D    DE++     +G    I+  V+ +    
Sbjct: 190 KVIAVDINQDKLNLA-KKIGADVIINSGDVNPVDEIKKITGGLGVQSAIVCAVARI-AFE 247
Query: 263 PLIGLLKSQGKLVLVGAPEKPLELPAFSLLMGRKIVGGSMIGGMKETQEMIDFAAKHNIR 322
             +  LK  GK+V V  P   + L   +++     V GS++G   +  E   F A+  ++
Sbjct: 248 QAVASLKPMGKMVAVALPNTEMTLSVPTVVFDGVEVAGSLVGTRLDLAEAFQFGAEGKVK 307
Query: 323 ADIEVIPADYVNTALERLAKADVRYRFVID 352
             +     + +N  ++ +    +  R VID
Sbjct: 308 PIVATRKLEEINDIIDEMKAGKIEGRMVID 337

>pdb|4EEZ|A Chain A, Crystal Structure Of Lactococcus Lactis Alcohol Dehydrogenase Variant Re1 Length = 348

Iteration: 1
 Score =  117 bits (294), Expect = 8e-27,   Method: Compositional matrix adjust.
 Identities = 89/330 (26%), Positives = 159/330 (48%), Gaps = 24/330 (7%)
Query: 33  RATGEKDVTFKVTHCGICHSDLHMIKNEWGNTIYPIVPGHEIVGVVTEVGSKVSKFKVGD 92
           RA    +    + +CG+CH+DLH+   ++GN    ++ GHE +G+V E+G+ VS  +VGD
Sbjct: 22  RAIKPNEALLDMEYCGVCHTDLHVAAGDFGNKAGTVL-GHEGIGIVKEIGADVSSLQVGD 80
Query: 93  KVGVGCMVGSCRSCDSCAIDLENYCPKVIMTYANKYHDGTITYGGYSD--IMVADEHFVV 150
           +V V      C  C+ C    E +C +V        + G    GG ++  I+VAD  + V
Sbjct: 81  RVSVAWFFEGCGHCEYCVSGNETFCREV-------KNAGYSVDGGMAEEAIVVAD--YAV 131
Query: 151 RIPEG-TPLDATAPLLCAGITVYSPLRFYGLDKPGMXXXXXXXXXXXXXXXKFAK-AMGV 208
           ++P+G  P++A++ + CAG+T Y  ++  G+ KPG                ++AK   G 
Sbjct: 132 KVPDGLDPIEASS-ITCAGVTTYKAIKVSGV-KPGDWQVIFGAGGLGNLAIQYAKNVFGA 189
Query: 209 KVTVISTSPSKKSEAIERLGADSFLVSRD---QDEMQ---AAMGTMDGIIDTVSAVHPLM 262
           KV  +  +  K + A +++GAD  + S D    DE++     +G    I+  V+ +    
Sbjct: 190 KVIAVDINQDKLNLA-KKIGADVTINSGDVNPVDEIKKITGGLGVQSAIVCAVARI-AFE 247
Query: 263 PLIGLLKSQGKLVLVGAPEKPLELPAFSLLMGRKIVGGSMIGGMKETQEMIDFAAKHNIR 322
             +  LK  GK+V V  P   + L   +++     V GS++G   +  E   F A+  ++
Sbjct: 248 QAVASLKPMGKMVAVAVPNTEMTLSVPTVVFDGVEVAGSLVGTRLDLAEAFQFGAEGKVK 307
Query: 323 ADIEVIPADYVNTALERLAKADVRYRFVID 352
             +     + +N  ++ +    +  R VID
Sbjct: 308 PIVATRKLEEINDIIDEMKAGKIEGRMVID 337

>pdb|1H2B|A Chain A, Crystal Structure Of The Alcohol Dehydrogenase From The Hyperthermophilic Archaeon Aeropyrum Pernix At 1.65a Resolution Length = 359

Iteration: 1
 Score =  100 bits (250), Expect = 1e-21,   Method: Compositional matrix adjust.
 Identities = 88/338 (26%), Positives = 144/338 (42%), Gaps = 36/338 (10%)
Query: 33  RATGEKDVTFKVTHCGICHSDLHMIKNEWGNTIYPIVP---GHEIVGVVTEVGSKVSKFK 89
           R  G  DV  ++   G+CH+DLH+++  W   + P +P   GHE VG + EV   V   +
Sbjct: 37  RLEGRFDVIVRIAGAGVCHTDLHLVQGMWHELLQPKLPYTLGHENVGYIEEVAEGVEGLE 96
Query: 90  VGDKVGVGCMV--GSCRSCDSCAIDLENYCPKVIMTYANKYHDGTITYGGYSDIMVADEH 147
            GD V +   V  G+C +C +     + +C        N    G    GG+++ M     
Sbjct: 97  KGDPVILHPAVTDGTCLACRAGE---DMHC-------ENLEFPGLNIDGGFAEFMRTSHR 146
Query: 148 FVVRIPEGTP---LDATAPLLCAGITVYSPLRFYGLD-KPGMXXXXXXXXXXXXXXXKFA 203
            V+++P+      L   APL  AGIT Y  ++       PG                +  
Sbjct: 147 SVIKLPKDISREKLVEMAPLADAGITAYRAVKKAARTLYPGAYVAIVGVGGLGHIAVQLL 206
Query: 204 KAMGVKVTVISTSPSKKSEAIERLGADSFLVSRDQDEMQAAMGTMDGIIDTVSAVHPLMP 263
           K M     +      +K +  ERLGAD  + +R +D ++  M    G       V+  M 
Sbjct: 207 KVMTPATVIALDVKEEKLKLAERLGADHVVDAR-RDPVKQVMELTRG-----RGVNVAMD 260
Query: 264 LIG----------LLKSQGKLVLVGAPEKPLELPAFSLLMGRKIVGGSMIGGMKETQEMI 313
            +G          LL   G+L++VG   + L  P   ++       GS++G   E  E++
Sbjct: 261 FVGSQATVDYTPYLLGRMGRLIIVGYGGE-LRFPTIRVISSEVSFEGSLVGNYVELHELV 319
Query: 314 DFAAKHNIRADIEVIPADYVNTALERLAKADVRYRFVI 351
             A +  +R ++++   D +N  LERL K +V  R V+
Sbjct: 320 TLALQGKVRVEVDIHKLDEINDVLERLEKGEVLGRAVL 357

>pdb|2H6E|A Chain A, Crystal Structure Of The D-Arabinose Dehydrogenase From Sulfolobus Solfataricus Length = 344

Iteration: 1
 Score = 85.9 bits (211), Expect = 3e-17,   Method: Compositional matrix adjust.
 Identities = 93/331 (28%), Positives = 144/331 (43%), Gaps = 34/331 (10%)
Query: 38  KDVTFKVTHCGICHSDLHMIKNEWGNTIY--PIVPGHEIVGVVTEVGSKVSKFKVGDKVG 95
           ++V  ++   G+C +DL + K       +  PI+ GHE  G + EVG +++K K GD V 
Sbjct: 29  EEVLIRIGGAGVCRTDLRVWKGVEAKQGFRLPIILGHENAGTIVEVG-ELAKVKKGDNVV 87
Query: 96  VGCMVG--SCRSCDSCAIDLENYCPKVIMTYANKYHDGTITYGGYSDIM-VADEHFVVRI 152
           V    G  +CR C        N C        N+   G  T GG+S+ M V    ++V++
Sbjct: 88  VYATWGDLTCRYCREGKF---NICK-------NQIIPGQTTNGGFSEYMLVKSSRWLVKL 137
Query: 153 PEGTPLDATAPLLCAGITVYSPLR-----FYGLDKPGMXXXXXXXXXXXXXXXKFAKAMG 207
              +P++A APL  AG T    +R          +P                 +  KA+ 
Sbjct: 138 NSLSPVEA-APLADAGTTSMGAIRQALPFISKFAEP--VVIVNGIGGLAVYTIQILKALM 194
Query: 208 VKVTVISTSPSKKSE--AIERLGADSFLVSRDQDEMQAAMGTMDGI-----IDTVSAVHP 260
             +T++  S SKK    A+E LGAD   VS  +D         DG+     ID V     
Sbjct: 195 KNITIVGISRSKKHRDFALE-LGAD--YVSEMKDAESLINKLTDGLGASIAIDLVGTEET 251
Query: 261 LMPLIGLLKSQGKLVLVGAPEKPLELPAFSLLMGRKIVGGSMIGGMKETQEMIDFAAKHN 320
              L  LL  +G ++LVG   K + L AF   +  K + GS  G + + ++++  +    
Sbjct: 252 TYNLGKLLAQEGAIILVGMEGKRVSLEAFDTAVWNKKLLGSNYGSLNDLEDVVRLSESGK 311
Query: 321 IRADIEVIPADYVNTALERLAKADVRYRFVI 351
           I+  I  +P D +N A   L +  V  R VI
Sbjct: 312 IKPYIIKVPLDDINKAFTNLDEGRVDGRQVI 342

>pdb|2EER|A Chain A, Structural Study Of Project Id St2577 From Sulfolobus Tokodaii Strain7 Length = 347

Iteration: 1
 Score = 80.5 bits (197), Expect = 1e-15,   Method: Compositional matrix adjust.
 Identities = 81/317 (25%), Positives = 136/317 (42%), Gaps = 24/317 (7%)
Query: 39  DVTFKVTHCGICHSDLHMIKNEWGN--------TIYPIVPGHEIVGVVTEVGSKVSKFKV 90
            V  K+   G+CHSD+HM +  +GN           P+  GHEI G + EVG +V  +  
Sbjct: 27  QVLIKIEAAGVCHSDVHMRQGRFGNLRIVEDLGVKLPVTLGHEIAGRIEEVGDEVVGYSK 86
Query: 91  GDKVGVGCMVGSCRSCDSCAIDLENYCPKVIMTYANKYHDGTITYGGYSDIMVADEHFVV 150
           GD V V    G   +C  C I  E+ C        N  +DG   Y  Y  ++V    ++ 
Sbjct: 87  GDLVAVNPWEGEG-NCYYCRIGEEHLCDSPRWLGIN--YDG--AYAEY--VLVPHYKYLY 139
Query: 151 RIPEGTPLDATAPLLCAGITVYSPLRFYGLDKPGMXXXXXXXXXXXXXXXKFAKAMGVKV 210
           ++   + ++A APL C+G+T Y  +R   LD                   + AKA+    
Sbjct: 140 KLRRLSAVEA-APLTCSGVTTYRAVRKASLDPSKTLVVIGAGGGLGTMAIQIAKAVS-GA 197
Query: 211 TVISTSPSKKS-EAIERLGADSFLVSRDQDEMQAAMGTM-----DGIIDTVSAVHPLMPL 264
           T+I     +++ EA +R GAD  + +  QD +            D +ID  ++   L   
Sbjct: 198 TIIGVDVREEALEAAKRAGADYVINASSQDPVSEIRRITQGKGADAVIDLNNSEKTLSIY 257
Query: 265 IGLLKSQGKLVLVGAPEKPLELPAFSLLMGRKIVGGSMIGGMKETQEMIDFAAKHNIRAD 324
             +L  QGK V+VG     L+  A  + +      GS++G   +   ++  A    ++  
Sbjct: 258 PYVLAKQGKYVMVGLFGADLKYHAPLITLNEVQFIGSLVGNQSDFLGIMSLAEAGKVKPM 317
Query: 325 I-EVIPADYVNTALERL 340
           + + +  +  N A++ L
Sbjct: 318 VTKTMKLEEANEAIDNL 334

>pdb|1R37|A Chain A, Alcohol Dehydrogenase From Sulfolobus Solfataricus Complexed With Nad(H) And 2-Ethoxyethanol Length = 347

Iteration: 1
 Score = 80.1 bits (196), Expect = 2e-15,   Method: Compositional matrix adjust.
 Identities = 83/320 (25%), Positives = 136/320 (42%), Gaps = 30/320 (9%)
Query: 39  DVTFKVTHCGICHSDLHMIKNEWGN--------TIYPIVPGHEIVGVVTEVGSKVSKFKV 90
            V  KV   G+CHSD+HM +  +GN           P+  GHEI G + EVG +V  +  
Sbjct: 27  QVLIKVEAAGVCHSDVHMRQGRFGNLRIVEDLGVKLPVTLGHEIAGKIEEVGDEVVGYSK 86
Query: 91  GDKVGVGCMVGSCRSCDSCAIDLENYC--PKVIMTYANKYHDGTITYGGYSD-IMVADEH 147
           GD V V    G   +C  C I  E+ C  P+ +         G    G Y++ ++V    
Sbjct: 87  GDLVAVNPWQGEG-NCYYCRIGEEHLCDSPRWL---------GINFDGAYAEYVIVPHYK 136
Query: 148 FVVRIPEGTPLDATAPLLCAGITVYSPLRFYGLDKPGMXXXXXXXXXXXXXXXKFAKAMG 207
           ++ ++     ++A APL C+GIT Y  +R   LD                   + AKA+ 
Sbjct: 137 YMYKLRRLNAVEA-APLTCSGITTYRAVRKASLDPTKTLLVVGAGGGLGTMAVQIAKAVS 195
Query: 208 VKVTVISTSPSKKS-EAIERLGADSFLVSRDQDEMQAAMGT-----MDGIIDTVSAVHPL 261
              T+I     +++ EA +R GAD  + +  QD +           +D +ID  ++   L
Sbjct: 196 -GATIIGVDVREEAVEAAKRAGADYVINASMQDPLAEIRRITESKGVDAVIDLNNSEKTL 254
Query: 262 MPLIGLLKSQGKLVLVGAPEKPLELPAFSLLMGRKIVGGSMIGGMKETQEMIDFAAKHNI 321
                 L  QGK V+VG     L   A  + +      GS++G   +   ++  A    +
Sbjct: 255 SVYPKALAKQGKYVMVGLFGADLHYHAPLITLSEIQFVGSLVGNQSDFLGIMRLAEAGKV 314
Query: 322 RADI-EVIPADYVNTALERL 340
           +  I + +  +  N A++ L
Sbjct: 315 KPMITKTMKLEEANEAIDNL 334

>pdb|3I4C|A Chain A, Crystal Structure Of Sulfolobus Solfataricus Adh(Ssadh) Double Mutant (W95l,N249y) Length = 347

Iteration: 1
 Score = 80.1 bits (196), Expect = 2e-15,   Method: Compositional matrix adjust.
 Identities = 83/320 (25%), Positives = 136/320 (42%), Gaps = 30/320 (9%)
Query: 39  DVTFKVTHCGICHSDLHMIKNEWGN--------TIYPIVPGHEIVGVVTEVGSKVSKFKV 90
            V  KV   G+CHSD+HM +  +GN           P+  GHEI G + EVG +V  +  
Sbjct: 27  QVLIKVEAAGVCHSDVHMRQGRFGNLRIVEDLGVKLPVTLGHEIAGKIEEVGDEVVGYSK 86
Query: 91  GDKVGVGCMVGSCRSCDSCAIDLENYC--PKVIMTYANKYHDGTITYGGYSD-IMVADEH 147
           GD V V  + G   +C  C I  E+ C  P+ +         G    G Y++ ++V    
Sbjct: 87  GDLVAVNPLQGEG-NCYYCRIGEEHLCDSPRWL---------GINFDGAYAEYVIVPHYK 136
Query: 148 FVVRIPEGTPLDATAPLLCAGITVYSPLRFYGLDKPGMXXXXXXXXXXXXXXXKFAKAMG 207
           ++ ++     ++A APL C+GIT Y  +R   LD                   + AKA+ 
Sbjct: 137 YMYKLRRLNAVEA-APLTCSGITTYRAVRKASLDPTKTLLVVGAGGGLGTMAVQIAKAVS 195
Query: 208 VKVTVISTSPSKKS-EAIERLGADSFLVSRDQDEMQAAMGT-----MDGIIDTVSAVHPL 261
              T+I     +++ EA +R GAD  + +  QD +           +D +ID   +   L
Sbjct: 196 -GATIIGVDVREEAVEAAKRAGADYVINASMQDPLAEIRRITESKGVDAVIDLNYSEKTL 254
Query: 262 MPLIGLLKSQGKLVLVGAPEKPLELPAFSLLMGRKIVGGSMIGGMKETQEMIDFAAKHNI 321
                 L  QGK V+VG     L   A  + +      GS++G   +   ++  A    +
Sbjct: 255 SVYPKALAKQGKYVMVGLFGADLHYHAPLITLSEIQFVGSLVGNQSDFLGIMRLAEAGKV 314
Query: 322 RADI-EVIPADYVNTALERL 340
           +  I + +  +  N A++ L
Sbjct: 315 KPMITKTMKLEEANEAIDNL 334

>pdb|1NTO|A Chain A, N249y Mutant Of Alcohol Dehydrogenase From The Archaeon Sulfolobus Solfataricus-Monoclinic Crystal Form Length = 347

Iteration: 1
 Score = 79.0 bits (193), Expect = 3e-15,   Method: Compositional matrix adjust.
 Identities = 83/320 (25%), Positives = 135/320 (42%), Gaps = 30/320 (9%)
Query: 39  DVTFKVTHCGICHSDLHMIKNEWGN--------TIYPIVPGHEIVGVVTEVGSKVSKFKV 90
            V  KV   G+CHSD+HM +  +GN           P+  GHEI G + EVG +V  +  
Sbjct: 27  QVLIKVEAAGVCHSDVHMRQGRFGNLRIVEDLGVKLPVTLGHEIAGKIEEVGDEVVGYSK 86
Query: 91  GDKVGVGCMVGSCRSCDSCAIDLENYC--PKVIMTYANKYHDGTITYGGYSD-IMVADEH 147
           GD V V    G   +C  C I  E+ C  P+ +         G    G Y++ ++V    
Sbjct: 87  GDLVAVNPWQGEG-NCYYCRIGEEHLCDSPRWL---------GINFDGAYAEYVIVPHYK 136
Query: 148 FVVRIPEGTPLDATAPLLCAGITVYSPLRFYGLDKPGMXXXXXXXXXXXXXXXKFAKAMG 207
           ++ ++     ++A APL C+GIT Y  +R   LD                   + AKA+ 
Sbjct: 137 YMYKLRRLNAVEA-APLTCSGITTYRAVRKASLDPTKTLLVVGAGGGLGTMAVQIAKAVS 195
Query: 208 VKVTVISTSPSKKS-EAIERLGADSFLVSRDQDEMQAAMGT-----MDGIIDTVSAVHPL 261
              T+I     +++ EA +R GAD  + +  QD +           +D +ID   +   L
Sbjct: 196 -GATIIGVDVREEAVEAAKRAGADYVINASMQDPLAEIRRITESKGVDAVIDLNYSEKTL 254
Query: 262 MPLIGLLKSQGKLVLVGAPEKPLELPAFSLLMGRKIVGGSMIGGMKETQEMIDFAAKHNI 321
                 L  QGK V+VG     L   A  + +      GS++G   +   ++  A    +
Sbjct: 255 SVYPKALAKQGKYVMVGLFGADLHYHAPLITLSEIQFVGSLVGNQSDFLGIMRLAEAGKV 314
Query: 322 RADI-EVIPADYVNTALERL 340
           +  I + +  +  N A++ L
Sbjct: 315 KPMITKTMKLEEANEAIDNL 334

>pdb|1JVB|A Chain A, Alcohol Dehydrogenase From The Archaeon Sulfolobus Solfataricus Length = 347

Iteration: 1
 Score = 75.1 bits (183), Expect = 6e-14,   Method: Compositional matrix adjust.
 Identities = 78/287 (27%), Positives = 120/287 (41%), Gaps = 29/287 (10%)
Query: 39  DVTFKVTHCGICHSDLHMIKNEWGN--------TIYPIVPGHEIVGVVTEVGSKVSKFKV 90
            V  KV   G+CHSD+H  +  +GN           P+  GHEI G + EVG +V  +  
Sbjct: 27  QVLIKVEAAGVCHSDVHXRQGRFGNLRIVEDLGVKLPVTLGHEIAGKIEEVGDEVVGYSK 86
Query: 91  GDKVGVGCMVGSCRSCDSCAIDLENYC--PKVIMTYANKYHDGTITYGGYSD-IMVADEH 147
           GD V V    G   +C  C I  E+ C  P+ +         G    G Y++ ++V    
Sbjct: 87  GDLVAVNPWQGEG-NCYYCRIGEEHLCDSPRWL---------GINFDGAYAEYVIVPHYK 136
Query: 148 FVVRIPEGTPLDATAPLLCAGITVYSPLRFYGLDKPGMXXXXXXXXXXXXXXXKFAKAMG 207
           +  ++     ++A APL C+GIT Y  +R   LD                   + AKA+ 
Sbjct: 137 YXYKLRRLNAVEA-APLTCSGITTYRAVRKASLDPTKTLLVVGAGGGLGTXAVQIAKAVS 195
Query: 208 VKVTVISTSPSKKS-EAIERLGADSFLVSRDQDEMQ-----AAMGTMDGIIDTVSAVHPL 261
              T+I     +++ EA +R GAD  + +  QD +           +D +ID  ++   L
Sbjct: 196 -GATIIGVDVREEAVEAAKRAGADYVINASMQDPLAEIRRITESKGVDAVIDLNNSEKTL 254
Query: 262 MPLIGLLKSQGKLVLVGAPEKPLELPAFSLLMGRKIVGGSMIGGMKE 308
                 L  QGK V VG     L   A  + +      GS++G   +
Sbjct: 255 SVYPKALAKQGKYVXVGLFGADLHYHAPLITLSEIQFVGSLVGNQSD 301

>pdb|3UKO|A Chain A, Crystal Structure Of S-Nitrosoglutathione Reductase From Arabidopsis Thaliana, Complex With Nadh Length = 378

Iteration: 1
 Score = 71.2 bits (173), Expect = 8e-13,   Method: Compositional matrix adjust.
 Identities = 82/334 (24%), Positives = 130/334 (38%), Gaps = 37/334 (11%)
Query: 39  DVTFKVTHCGICHSDLHMIKNEWGNTIYPIVPGHEIVGVVTEVGSKVSKFKVGDKVGVGC 98
           +V  K+ +  +CH+D +    +    ++P + GHE  G+V  VG  V++ + GD V + C
Sbjct: 35  EVRIKILYTALCHTDAYTWSGKDPEGLFPCILGHEAAGIVESVGEGVTEVQAGDHV-IPC 93
Query: 99  MVGSCRSCDSCAIDLENYCPKV-------IMTYANK----------YHD-GTITYGGYSD 140
               CR C  C     N C KV       IM    K          YH  GT T+  Y+ 
Sbjct: 94  YQAECRECKFCKSGKTNLCGKVRSATGVGIMMNDRKSRFSVNGKPIYHFMGTSTFSQYT- 152
Query: 141 IMVADEHFVVRIPEGTPLDATAPLLCAGITVYSPLRFYGLDKPGMXXXXXXXXXXXXXXX 200
             V  +  V +I    PLD    L C   T    +      +PG                
Sbjct: 153 --VVHDVSVAKIDPTAPLDKVCLLGCGVPTGLGAVWNTAKVEPGSNVAIFGLGTVGLAVA 210
Query: 201 KFAKAMGVKVTVISTSPSKKSEAIERLGADSFLVSRDQDE--MQAAMGTMDGIID----- 253
           + AK  G    +     SKK E  ++ G + F+  +D D+   +  +   DG +D     
Sbjct: 211 EGAKTAGASRIIGIDIDSKKYETAKKFGVNEFVNPKDHDKPIQEVIVDLTDGGVDYSFEC 270
Query: 254 --TVSAVHPLMPLIGLLKSQGKLVLVGAPEKPLELPA--FSLLMGRKIVGGSMIGGMKET 309
              VS +   +      K  G  V+VG      E+    F L+ GR +  G+  GG K +
Sbjct: 271 IGNVSVMRAALEC--CHKGWGTSVIVGVAASGQEISTRPFQLVTGR-VWKGTAFGGFK-S 326
Query: 310 QEMIDFAAKHNIRADIEVIPADYVNTALERLAKA 343
           +  + +  +  +  +I+V      N  L  + KA
Sbjct: 327 RTQVPWLVEKYMNKEIKVDEYITHNLTLGEINKA 360

>pdb|2XAA|A Chain A, Alcohol Dehydrogenase Adh-'a' From Rhodococcus Ruber Dsm 44541 At Ph 8.5 In Complex With Nad And Butane-1,4-Diol Length = 345

Iteration: 1
 Score = 68.6 bits (166), Expect = 5e-12,   Method: Compositional matrix adjust.
 Identities = 54/153 (35%), Positives = 75/153 (49%), Gaps = 8/153 (5%)
Query: 36  GEKDVTFKVTHCGICHSDLHMIKNEWGNTIY--PIVPGHEIVGVVTEVGSKVSKFKVGDK 93
           G  ++  KVT  G+CHSD+ ++        Y  P+  GHE VG V E+G  V+ F VGD 
Sbjct: 24  GPGEILLKVTAAGLCHSDIFVMDMPAAQYAYGLPLTLGHEGVGTVAELGEGVTGFGVGDA 83
Query: 94  VGVGCMVGSCRSCDSCAIDLENYCPKVIMTYANKYHDGTITYGGYSDIMVADE-HFVVRI 152
           V V    G C +C +CA   ENYC +           G  + G  ++ M+ D    +V I
Sbjct: 84  VAVYGPWG-CGACHACARGRENYCTRAADLGITP--PGLGSPGSMAEYMIVDSARHLVPI 140
Query: 153 PEGTPLDATAPLLCAGITVYSPL-RFYGLDKPG 184
            +  P+ A APL  AG+T Y  + R   L  PG
Sbjct: 141 GDLDPV-AAAPLTDAGLTPYHAISRVLPLLGPG 172

>pdb|4DL9|A Chain A, Crystal Structure Of S-nitrosoglutathione Reductase From Tomato (solanum Lycopersicum) In Complex With Nad+ Length = 396

Iteration: 1
 Score = 67.4 bits (163), Expect = 1e-11,   Method: Compositional matrix adjust.
 Identities = 87/351 (24%), Positives = 136/351 (38%), Gaps = 45/351 (12%)
Query: 39  DVTFKVTHCGICHSDLHMIKNEWGNTIYPIVPGHEIVGVVTEVGSKVSKFKVGDKVGVGC 98
           +V  KV +  +CH+D +    +    ++P V GHE  G+V  VG  V++ + GD V + C
Sbjct: 53  EVRVKVLYTALCHTDAYTWSGKDPEGLFPCVLGHEAAGIVESVGEGVTEVQPGDHV-IPC 111
Query: 99  MVGSCRSCDSCAIDLENYCPKV-------IMTYANK----------YHD-GTITYGGYSD 140
               CR C  C     N C KV       +M    K          YH  GT T+  Y+ 
Sbjct: 112 YQAECRECKFCKSGKTNLCGKVRAATGVGVMMNDRKSRFSINGKPIYHFMGTSTFSQYT- 170
Query: 141 IMVADEHFVVRIPEGTPLDATAPLLCAGITVYSPLRFYGLDKPGMXXXXXXXXXXXXXXX 200
             V  +  V +I    PL+    L C   T    +      +PG                
Sbjct: 171 --VVHDVSVAKIDPVAPLEKVCLLGCGVPTGLGAVWNTAKVEPGSIVAVFGLGTVGLAVA 228
Query: 201 KFAKAMGVKVTVISTSPSKKSEAIERLGADSFLVSRDQDE--MQAAMGTMDGIID----- 253
           + AKA G    +     SKK +  +  G   F+  ++ ++   Q  +   DG +D     
Sbjct: 229 EGAKAAGASRIIGIDIDSKKFDRAKNFGVTEFINPKEHEQPIQQVIVDLTDGGVDYSFEC 288
Query: 254 --TVSAVHPLMPLIGLLKSQGKLVLVGAPEKPLELPA--FSLLMGRKIVGGSMIGGMKET 309
              VS +   +      K  G  V+VG      E+    F L+ GR +  G+  GG K  
Sbjct: 289 IGNVSVMRSALEC--CHKGWGTSVIVGVAASGQEISTRPFQLVTGR-VWKGTAFGGFKSR 345
Query: 310 QE---MIDFAAKHNIRADIEVIPADY----VNTALERLAKADVRYRFVIDV 353
            +   ++D   K  I+ D E I  +     +N A + +   D   R V+D+
Sbjct: 346 SQVPSLVDKYLKKEIKVD-EYITHNMTLADINKAFDLMHDGDC-LRVVLDM 394

>pdb|1HDY|A Chain A, Three-Dimensional Structures Of Three Human Alcohol Dehydrogenase Variants: Correlations With Their Functional Differences Length = 374

Iteration: 1
 Score = 66.6 bits (161), Expect = 2e-11,   Method: Compositional matrix adjust.
 Identities = 88/334 (26%), Positives = 138/334 (41%), Gaps = 38/334 (11%)
Query: 39  DVTFKVTHCGICHSDLHMIKNEWGNTI--YPIVPGHEIVGVVTEVGSKVSKFKVGDKVGV 96
           +V  K+   GICH+D H++    GN +   P++ GHE  G+V  VG  V+  K GDKV +
Sbjct: 35  EVRIKMVAVGICHTDDHVVS---GNLVTPLPVILGHEAAGIVESVGEGVTTVKPGDKV-I 90
Query: 97  GCMVGSCRSCDSCAIDLENYCPKV-IMTYANKYHDGTITY-------------GGYSDIM 142
                 C  C  C     NYC K  +        DGT  +               +S   
Sbjct: 91  PLFTPQCGKCRVCKNPESNYCLKNDLGNPRGTLQDGTRRFTCRGKPIHHFLGTSTFSQYT 150
Query: 143 VADEHFVVRIPEGTPLDATAPLLCAGITVYSPLRFYGLDKPGMXXXXXXXXXXXXXXXKF 202
           V DE+ V +I   +PL+    + C   T Y          PG                  
Sbjct: 151 VVDENAVAKIDAASPLEKVCLIGCGFSTGYGSAVNVAKVTPGSTCAVFGLGGVGLSAVMG 210
Query: 203 AKAMG-VKVTVISTSPSKKSEAIERLGADSFLVSRD-QDEMQAAMGTM-DGIID----TV 255
            KA G  ++  +  +  K ++A E LGA   +  +D +  +Q  +  M DG +D     +
Sbjct: 211 CKAAGAARIIAVDINKDKFAKAKE-LGATECINPQDYKKPIQEVLKEMTDGGVDFSFEVI 269
Query: 256 SAVHPLM-PLIGLLKSQGKLVLVGAP--EKPLELPAFSLLMGRKIVGGSMIGGMKETQEM 312
             +  +M  L+   ++ G  V+VG P   + L +    LL GR    G++ GG K  + +
Sbjct: 270 GRLDTMMASLLCCHEACGTSVIVGVPPASQNLSINPMLLLTGRTW-KGAVYGGFKSKEGI 328
Query: 313 ----IDF-AAKHNIRADI-EVIPADYVNTALERL 340
                DF A K ++ A I  V+P + +N   + L
Sbjct: 329 PKLVADFMAKKFSLDALITHVLPFEKINEGFDLL 362

>pdb|1HT0|A Chain A, Human Gamma-2 Alcohol Dehydrogense Length = 374

Iteration: 1
 Score = 66.2 bits (160), Expect = 2e-11,   Method: Compositional matrix adjust.
 Identities = 88/334 (26%), Positives = 137/334 (41%), Gaps = 38/334 (11%)
Query: 39  DVTFKVTHCGICHSDLHMIKNEWGNTI--YPIVPGHEIVGVVTEVGSKVSKFKVGDKVGV 96
           +V  K+   GIC SD H++    GN +   P++ GHE  G+V  VG  V+  K GDKV +
Sbjct: 35  EVRIKMVAAGICRSDEHVVS---GNLVTPLPVILGHEAAGIVESVGEGVTTVKPGDKV-I 90
Query: 97  GCMVGSCRSCDSCAIDLENYCPKV-IMTYANKYHDGT-------------ITYGGYSDIM 142
                 C  C  C     NYC K  +        DGT             +    +S   
Sbjct: 91  PLFTPQCGKCRICKNPESNYCLKNDLGNPRGTLQDGTRRFTCSGKPIHHFVGVSTFSQYT 150
Query: 143 VADEHFVVRIPEGTPLDATAPLLCAGITVYSPLRFYGLDKPGMXXXXXXXXXXXXXXXKF 202
           V DE+ V +I   +PL+    + C   T Y          PG                  
Sbjct: 151 VVDENAVAKIDAASPLEKVCLIGCGFSTGYGSAVKVAKVTPGSTCAVFGLGGVGLSVVMG 210
Query: 203 AKAMG-VKVTVISTSPSKKSEAIERLGADSFLVSRD-QDEMQAAMGTM-DGIID----TV 255
            KA G  ++  +  +  K ++A E LGA   +  +D +  +Q  +  M DG +D     +
Sbjct: 211 CKAAGAARIIAVDINKDKFAKAKE-LGATECINPQDYKKPIQEVLKEMTDGGVDFSFEVI 269
Query: 256 SAVHPLM-PLIGLLKSQGKLVLVGAP--EKPLELPAFSLLMGRKIVGGSMIGGMKETQE- 311
             +  +M  L+   ++ G  V+VG P   + L +    LL GR    G++ GG K  +  
Sbjct: 270 GQLDTMMASLLCCHEACGTSVIVGVPPDSQNLSINPMLLLTGRTW-KGAIFGGFKSKESV 328
Query: 312 ---MIDF-AAKHNIRADI-EVIPADYVNTALERL 340
              + DF A K ++ A I  V+P + +N   + L
Sbjct: 329 PKLVADFMAKKFSLDALITNVLPFEKINEGFDLL 362

>pdb|1AGN|A Chain A, X-Ray Structure Of Human Sigma Alcohol Dehydrogenase Length = 373

Iteration: 1
 Score = 65.9 bits (159), Expect = 3e-11,   Method: Compositional matrix adjust.
 Identities = 82/346 (23%), Positives = 134/346 (38%), Gaps = 61/346 (17%)
Query: 38  KDVTFKVTHCGICHSDLHMIKNEWGNTIYPIVPGHEIVGVVTEVGSKVSKFKVGDKVGVG 97
           K+V  K+   GIC +D H+IK    +  +P++ GHE  G+V  +G  V+  K GDKV + 
Sbjct: 34  KEVRIKILATGICRTDDHVIKGTMVSK-FPVIVGHEATGIVESIGEGVTTVKPGDKV-IP 91
Query: 98  CMVGSCRSCDSCAIDLENYCPKVIMTYANKYHDGTITY-------------GGYSDIMVA 144
             +  CR C++C     N C +  +T      DGT  +               +++  V 
Sbjct: 92  LFLPQCRECNACRNPDGNLCIRSDITGRGVLADGTTRFTCKGKPVHHFMNTSTFTEYTVV 151
Query: 145 DEHFVVRIPEGTPLDATAPLLCAGITVYSPLRFYGLDKPG-------------------M 185
           DE  V +I +  P +    + C   T Y      G  KPG                    
Sbjct: 152 DESSVAKIDDAAPPEKVCLIGCGFSTGYGAAVKTGKVKPGSTCVVFGLGGVGLSVIMGCK 211
Query: 186 XXXXXXXXXXXXXXXKFAKAMGVKVTVISTSPSKKSEAIERLGADSFLVSRDQDEMQAAM 245
                          KF KAM V  T    SP   ++ I  + ++  +   +       +
Sbjct: 212 SAGASRIIGIDLNKDKFEKAMAVGATE-CISPKDSTKPISEVLSE--MTGNNVGYTFEVI 268
Query: 246 GTMDGIIDTVSAVHPLMPLIGLLKSQGKLVLVGAP--EKPLELPAFSLLMGRKIVGGSMI 303
           G ++ +ID +++ H          + G  V+VG P   K L      L  GR    G + 
Sbjct: 269 GHLETMIDALASCH---------MNYGTSVVVGVPPSAKMLTYDPMLLFTGRTW-KGCVF 318
Query: 304 GGMKETQE----MIDFAAKHNIRADIE-----VIPADYVNTALERL 340
           GG+K   +    + +F AK   + D++     V+P   ++   E L
Sbjct: 319 GGLKSRDDVPKLVTEFLAK---KFDLDQLITHVLPFKKISEGFELL 361

>pdb|1D1T|A Chain A, Mutant Of Human Sigma Alcohol Dehydrogenase With Leucine At Position 141 Length = 373

Iteration: 1
 Score = 65.9 bits (159), Expect = 3e-11,   Method: Compositional matrix adjust.
 Identities = 82/346 (23%), Positives = 134/346 (38%), Gaps = 61/346 (17%)
Query: 38  KDVTFKVTHCGICHSDLHMIKNEWGNTIYPIVPGHEIVGVVTEVGSKVSKFKVGDKVGVG 97
           K+V  K+   GIC +D H+IK    +  +P++ GHE  G+V  +G  V+  K GDKV + 
Sbjct: 34  KEVRIKILATGICRTDDHVIKGTMVSK-FPVIVGHEATGIVESIGEGVTTVKPGDKV-IP 91
Query: 98  CMVGSCRSCDSCAIDLENYCPKVIMTYANKYHDGTITY-------------GGYSDIMVA 144
             +  CR C++C     N C +  +T      DGT  +               +++  V 
Sbjct: 92  LFLPQCRECNACRNPDGNLCIRSDITGRGVLADGTTRFTCKGKPVHHFLNTSTFTEYTVV 151
Query: 145 DEHFVVRIPEGTPLDATAPLLCAGITVYSPLRFYGLDKPG-------------------M 185
           DE  V +I +  P +    + C   T Y      G  KPG                    
Sbjct: 152 DESSVAKIDDAAPPEKVCLIGCGFSTGYGAAVKTGKVKPGSTCVVFGLGGVGLSVIMGCK 211
Query: 186 XXXXXXXXXXXXXXXKFAKAMGVKVTVISTSPSKKSEAIERLGADSFLVSRDQDEMQAAM 245
                          KF KAM V  T    SP   ++ I  + ++  +   +       +
Sbjct: 212 SAGASRIIGIDLNKDKFEKAMAVGATE-CISPKDSTKPISEVLSE--MTGNNVGYTFEVI 268
Query: 246 GTMDGIIDTVSAVHPLMPLIGLLKSQGKLVLVGAP--EKPLELPAFSLLMGRKIVGGSMI 303
           G ++ +ID +++ H          + G  V+VG P   K L      L  GR    G + 
Sbjct: 269 GHLETMIDALASCH---------MNYGTSVVVGVPPSAKMLTYDPMLLFTGRTW-KGCVF 318
Query: 304 GGMKETQE----MIDFAAKHNIRADIE-----VIPADYVNTALERL 340
           GG+K   +    + +F AK   + D++     V+P   ++   E L
Sbjct: 319 GGLKSRDDVPKLVTEFLAK---KFDLDQLITHVLPFKKISEGFELL 361

>pdb|1HSO|A Chain A, Human Alpha Alcohol Dehydrogenase (Adh1a) Length = 374

Iteration: 1
 Score = 64.3 bits (155), Expect = 1e-10,   Method: Compositional matrix adjust.
 Identities = 86/332 (25%), Positives = 137/332 (41%), Gaps = 34/332 (10%)
Query: 39  DVTFKVTHCGICHSDLHMIKNEWGNTIYPIVPGHEIVGVVTEVGSKVSKFKVGDKVGVGC 98
           +V  K+   GIC +D H++      T  P++ GHE  G+V  VG  V+  K GDKV +  
Sbjct: 35  EVRIKMVAVGICGTDDHVVSGTM-VTPLPVILGHEAAGIVESVGEGVTTVKPGDKV-IPL 92
Query: 99  MVGSCRSCDSCAIDLENYCPKV-IMTYANKYHDGTITY-------------GGYSDIMVA 144
            +  C  C  C     NYC K  +        DGT  +               +S   V 
Sbjct: 93  AIPQCGKCRICKNPESNYCLKNDVSNPQGTLQDGTSRFTCRRKPIHHFLGISTFSQYTVV 152
Query: 145 DEHFVVRIPEGTPLDATAPLLCAGITVYSPLRFYGLDKPGMXXXXXXXXXXXXXXXKFAK 204
           DE+ V +I   +PL+    + C   T Y          PG                   K
Sbjct: 153 DENAVAKIDAASPLEKVCLIGCGFSTGYGSAVNVAKVTPGSTCAVFGLGGVGLSAIMGCK 212
Query: 205 AMG-VKVTVISTSPSKKSEAIERLGADSFLVSRD-QDEMQAAMGTM-DGIID----TVSA 257
           A G  ++  +  +  K ++A E LGA   +  +D +  +Q  +  M DG +D     +  
Sbjct: 213 AAGAARIIAVDINKDKFAKAKE-LGATECINPQDYKKPIQEVLKEMTDGGVDFSFEVIGR 271
Query: 258 VHPLM-PLIGLLKSQGKLVLVGAP--EKPLELPAFSLLMGRKIVGGSMIGGMKETQ---- 310
           +  +M  L+   ++ G  V+VG P   + L +    LL GR    G+++GG K  +    
Sbjct: 272 LDTMMASLLCCHEACGTSVIVGVPPDSQNLSMNPMLLLTGRTW-KGAILGGFKSKECVPK 330
Query: 311 EMIDF-AAKHNIRADI-EVIPADYVNTALERL 340
            + DF A K ++ A I  V+P + +N   + L
Sbjct: 331 LVADFMAKKFSLDALITHVLPFEKINEGFDLL 362

>pdb|1HDX|A Chain A, Three-Dimensional Structures Of Three Human Alcohol Dehydrogenase Variants: Correlations With Their Functional Differences Length = 374

Iteration: 1
 Score = 63.5 bits (153), Expect = 2e-10,   Method: Compositional matrix adjust.
 Identities = 87/334 (26%), Positives = 137/334 (41%), Gaps = 38/334 (11%)
Query: 39  DVTFKVTHCGICHSDLHMIKNEWGNTI--YPIVPGHEIVGVVTEVGSKVSKFKVGDKVGV 96
           +V  K+   GIC +D H++    GN +   P++ GHE  G+V  VG  V+  K GDKV +
Sbjct: 35  EVRIKMVAVGICRTDDHVVS---GNLVTPLPVILGHEAAGIVESVGEGVTTVKPGDKV-I 90
Query: 97  GCMVGSCRSCDSCAIDLENYCPKV-IMTYANKYHDGTITY-------------GGYSDIM 142
                 C  C  C     NYC K  +        DGT  +               +S   
Sbjct: 91  PLFTPQCGKCRVCKNPESNYCLKNDLGNPRGTLQDGTRRFTCRGKPIHHFLGTSTFSQYT 150
Query: 143 VADEHFVVRIPEGTPLDATAPLLCAGITVYSPLRFYGLDKPGMXXXXXXXXXXXXXXXKF 202
           V DE+ V +I   +PL+    + C   T Y          PG                  
Sbjct: 151 VVDENAVAKIDAASPLEKVCLIGCGFSTGYGSAVNVAKVTPGSTCAVFGLGGVGLSAVMG 210
Query: 203 AKAMG-VKVTVISTSPSKKSEAIERLGADSFLVSRD-QDEMQAAMGTM-DGIID----TV 255
            KA G  ++  +  +  K ++A E LGA   +  +D +  +Q  +  M DG +D     +
Sbjct: 211 CKAAGAARIIAVDINKDKFAKAKE-LGATECINPQDYKKPIQEVLKEMTDGGVDFSFEVI 269
Query: 256 SAVHPLM-PLIGLLKSQGKLVLVGAP--EKPLELPAFSLLMGRKIVGGSMIGGMKETQEM 312
             +  +M  L+   ++ G  V+VG P   + L +    LL GR    G++ GG K  + +
Sbjct: 270 GRLDTMMASLLCCHEACGTSVIVGVPPASQNLSINPMLLLTGRTW-KGAVYGGFKSKEGI 328
Query: 313 ----IDF-AAKHNIRADI-EVIPADYVNTALERL 340
                DF A K ++ A I  V+P + +N   + L
Sbjct: 329 PKLVADFMAKKFSLDALITHVLPFEKINEGFDLL 362

>pdb|1HTB|A Chain A, Crystallization Of Human Beta3 Alcohol Dehydrogenase (10 MgML) IN 100 MM SODIUM PHOSPHATE (PH 7.5), 7.5 MM NAD+ And 1 Mm 4-Iodopyrazole At 25 C Length = 374

Iteration: 1
 Score = 63.5 bits (153), Expect = 2e-10,   Method: Compositional matrix adjust.
 Identities = 87/334 (26%), Positives = 137/334 (41%), Gaps = 38/334 (11%)
Query: 39  DVTFKVTHCGICHSDLHMIKNEWGNTI--YPIVPGHEIVGVVTEVGSKVSKFKVGDKVGV 96
           +V  K+   GIC +D H++    GN +   P++ GHE  G+V  VG  V+  K GDKV +
Sbjct: 35  EVRIKMVAVGICRTDDHVVS---GNLVTPLPVILGHEAAGIVESVGEGVTTVKPGDKV-I 90
Query: 97  GCMVGSCRSCDSCAIDLENYCPKV-IMTYANKYHDGTITY-------------GGYSDIM 142
                 C  C  C     NYC K  +        DGT  +               +S   
Sbjct: 91  PLFTPQCGKCRVCKNPESNYCLKNDLGNPRGTLQDGTRRFTCRGKPIHHFLGTSTFSQYT 150
Query: 143 VADEHFVVRIPEGTPLDATAPLLCAGITVYSPLRFYGLDKPGMXXXXXXXXXXXXXXXKF 202
           V DE+ V +I   +PL+    + C   T Y          PG                  
Sbjct: 151 VVDENAVAKIDAASPLEKVCLIGCGFSTGYGSAVNVAKVTPGSTCAVFGLGGVGLSAVMG 210
Query: 203 AKAMG-VKVTVISTSPSKKSEAIERLGADSFLVSRD-QDEMQAAMGTM-DGIID----TV 255
            KA G  ++  +  +  K ++A E LGA   +  +D +  +Q  +  M DG +D     +
Sbjct: 211 CKAAGAARIIAVDINKDKFAKAKE-LGATECINPQDYKKPIQEVLKEMTDGGVDFSFEVI 269
Query: 256 SAVHPLM-PLIGLLKSQGKLVLVGAP--EKPLELPAFSLLMGRKIVGGSMIGGMKETQEM 312
             +  +M  L+   ++ G  V+VG P   + L +    LL GR    G++ GG K  + +
Sbjct: 270 GRLDTMMASLLCCHEACGTSVIVGVPPASQNLSINPMLLLTGRTW-KGAVYGGFKSKEGI 328
Query: 313 ----IDF-AAKHNIRADI-EVIPADYVNTALERL 340
                DF A K ++ A I  V+P + +N   + L
Sbjct: 329 PKLVADFMAKKFSLDALITHVLPFEKINEGFDLL 362

>pdb|1HDZ|A Chain A, Three-Dimensional Structures Of Three Human Alcohol Dehydrogenase Variants: Correlations With Their Functional Differences Length = 374

Iteration: 1
 Score = 62.8 bits (151), Expect = 3e-10,   Method: Compositional matrix adjust.
 Identities = 87/334 (26%), Positives = 137/334 (41%), Gaps = 38/334 (11%)
Query: 39  DVTFKVTHCGICHSDLHMIKNEWGNTI--YPIVPGHEIVGVVTEVGSKVSKFKVGDKVGV 96
           +V  K+   GIC +D H++    GN +   P++ GHE  G+V  VG  V+  K GDKV +
Sbjct: 35  EVRIKMVAVGICGTDDHVVS---GNLVTPLPVILGHEAAGIVESVGEGVTTVKPGDKV-I 90
Query: 97  GCMVGSCRSCDSCAIDLENYCPKV-IMTYANKYHDGTITY-------------GGYSDIM 142
                 C  C  C     NYC K  +        DGT  +               +S   
Sbjct: 91  PLFTPQCGKCRVCKNPESNYCLKNDLGNPRGTLQDGTRRFTCRGKPIHHFLGTSTFSQYT 150
Query: 143 VADEHFVVRIPEGTPLDATAPLLCAGITVYSPLRFYGLDKPGMXXXXXXXXXXXXXXXKF 202
           V DE+ V +I   +PL+    + C   T Y          PG                  
Sbjct: 151 VVDENAVAKIDAASPLEKVCLIGCGFSTGYGSAVNVAKVTPGSTCAVFGLGGVGLSAVMG 210
Query: 203 AKAMG-VKVTVISTSPSKKSEAIERLGADSFLVSRD-QDEMQAAMGTM-DGIID----TV 255
            KA G  ++  +  +  K ++A E LGA   +  +D +  +Q  +  M DG +D     +
Sbjct: 211 CKAAGAARIIAVDINKDKFAKAKE-LGATECINPQDYKKPIQEVLKEMTDGGVDFSFEVI 269
Query: 256 SAVHPLM-PLIGLLKSQGKLVLVGAP--EKPLELPAFSLLMGRKIVGGSMIGGMKETQEM 312
             +  +M  L+   ++ G  V+VG P   + L +    LL GR    G++ GG K  + +
Sbjct: 270 GRLDTMMASLLCCHEACGTSVIVGVPPASQNLSINPMLLLTGRTW-KGAVYGGFKSKEGI 328
Query: 313 ----IDF-AAKHNIRADI-EVIPADYVNTALERL 340
                DF A K ++ A I  V+P + +N   + L
Sbjct: 329 PKLVADFMAKKFSLDALITHVLPFEKINEGFDLL 362

>pdb|4EJ6|A Chain A, Crystal Structure Of A Putative Zinc-Binding Dehydrogenase (Target Psi-012003) From Sinorhizobium Meliloti 1021 Length = 370

Iteration: 1
 Score = 62.8 bits (151), Expect = 3e-10,   Method: Compositional matrix adjust.
 Identities = 69/281 (24%), Positives = 110/281 (39%), Gaps = 28/281 (9%)
Query: 36  GEKDVTFKVTHCGICHSDLHMIKNEWGNTIYPIVPGHEIVGVVTEVGSKVSKFKVGDKVG 95
           G  D+  KV  CGIC +D H++  E+ +T  P+  GHE  G+V E GS V     G ++ 
Sbjct: 46  GPDDLLVKVEACGICGTDRHLLHGEFPST-PPVTLGHEFCGIVVEAGSAVRDIAPGARI- 103
Query: 96  VGCMVGSCRSCDSCAIDLENYCPKVIMTYANKYHDGTITYGGYSDIMVADEHFVVRIPEG 155
            G    SC  C  C     N C        N    G    GG+++ ++        IP  
Sbjct: 104 TGDPNISCGRCPQCQAGRVNLC-------RNLRAIGIHRDGGFAEYVLVPRKQAFEIP-- 154
Query: 156 TPLDATAPLLCAGITVYSPLRFYGLD----KPGMXXXXXXXXXXXXXXXKFAKAMGVKVT 211
             LD      C  +        +G+D    K G                + A+  G    
Sbjct: 155 LTLDPVHGAFCEPLACC----LHGVDLSGIKAGSTVAILGGGVIGLLTVQLARLAGATTV 210
Query: 212 VISTSPSKKSEAIERLGADSFLVSRDQDEMQAAMGT-------MDGIIDTVSAVHPLMPL 264
           ++ST  + K    E +GA + +     D ++A  G        +D +I+       +   
Sbjct: 211 ILSTRQATKRRLAEEVGATATVDPSAGDVVEAIAGPVGLVPGGVDVVIECAGVAETVKQS 270
Query: 265 IGLLKSQGKLVLVGA-PE-KPLELPAFSLLMGRKIVGGSMI 303
             L K+ G +V++G  P+ + +E+  F +L     V GS I
Sbjct: 271 TRLAKAGGTVVILGVLPQGEKVEIEPFDILFRELRVLGSFI 311

>pdb|1VJ0|A Chain A, Crystal Structure Of Alcohol Dehydrogenase (Tm0436) From Thermotoga Maritima At 2.00 A Resolution Length = 380

Iteration: 1
 Score = 61.2 bits (147), Expect = 8e-10,   Method: Compositional matrix adjust.
 Identities = 71/276 (25%), Positives = 114/276 (41%), Gaps = 27/276 (9%)
Query: 40  VTFKVTHCGICHSDLHMIKNEWGNTIYPIVPGHEIVGVVTEVGSKVSKFKVGDKVGVGCM 99
           +  ++   G+C SD+HM + E      PI+ GHE  G V EV  +      G+ +  G +
Sbjct: 45  ILVEILSAGVCGSDVHMFRGEDPRVPLPIILGHEGAGRVVEVNGEKRDLN-GELLKPGDL 103
Query: 100 VG-----SCRSCDSCAIDLENY-CPKVIMTYANKYHDGTITY----GGYSDIMVAD-EHF 148
           +      +C  C  C +  E Y CP   +   N+   G   Y    G YS  +V D E  
Sbjct: 104 IVWNRGITCGECYWCKVSKEPYLCPNRKVYGINR---GCSEYPHLRGCYSSHIVLDPETD 160
Query: 149 VVRIPEGTPLDATAPLLCAGITVYSPLRFYGLDKPGMXXXXXXXXXXXXXXXKFAKAMGV 208
           V+++ E   LD  A  +C+G T Y     Y     G                  A+++G 
Sbjct: 161 VLKVSEKDDLDVLAMAMCSGATAYHAFDEYPESFAGKTVVIQGAGPLGLFGVVIARSLGA 220
Query: 209 K-VTVISTSPSKKSEAIERLGADSFLVSRD---QDEMQAAMGTMDG-----IIDTVSAVH 259
           + V VI+ SP++   A E +GAD  L  R+   ++  +A M    G     I++      
Sbjct: 221 ENVIVIAGSPNRLKLA-EEIGADLTLNRRETSVEERRKAIMDITHGRGADFILEATGDSR 279
Query: 260 PLMPLIGLLKSQGKLVLVG--APEKPLELPAFSLLM 293
            L+    LL+  G   + G   P+ P+    +  L+
Sbjct: 280 ALLEGSELLRRGGFYSVAGVAVPQDPVPFKVYEWLV 315

>pdb|1CDO|A Chain A, Alcohol Dehydrogenase (E.C.1.1.1.1) (Ee Isozyme) Complexed With Nicotinamide Adenine Dinucleotide (Nad), And Zinc Length = 374

Iteration: 1
 Score = 61.2 bits (147), Expect = 8e-10,   Method: Compositional matrix adjust.
 Identities = 80/337 (23%), Positives = 126/337 (37%), Gaps = 42/337 (12%)
Query: 38  KDVTFKVTHCGICHSDLHMIKNEWGNTIYPIVPGHEIVGVVTEVGSKVSKFKVGDKVGVG 97
            ++  K+   G+CH+DL+ +        +P+V GHE  G+V  VG  V++F+ G+KV + 
Sbjct: 34  NEIRIKIIATGVCHTDLYHLFEGKHKDGFPVVLGHEGAGIVESVGPGVTEFQPGEKV-IP 92
Query: 98  CMVGSCRSCDSCAIDLENYCPKVIMTYANKYHD--------------------GTITYGG 137
             +  C  C  C     N C K    +AN+  D                    GT T+  
Sbjct: 93  LFISQCGECRFCQSPKTNQCVK---GWANESPDVMSPKETRFTCKGRKVLQFLGTSTFSQ 149
Query: 138 YSDIMVADEHFVVRIPEGTPLDATAPLLCAGITVYSPLRFYGLDKPGMXXXXXXXXXXXX 197
           Y+   V ++  V +I    PLD    L C   T +         +PG             
Sbjct: 150 YT---VVNQIAVAKIDPSAPLDTVCLLGCGVSTGFGAAVNTAKVEPGSTCAVFGLGAVGL 206
Query: 198 XXXKFAKAMGVKVTVISTSPSKKSEAIERLGADSFLVSRDQDE------MQAAMGTMDGI 251
                  + G K  +       K E  +  GA  F+   D  E       +   G +D  
Sbjct: 207 AAVMGCHSAGAKRIIAVDLNPDKFEKAKVFGATDFVNPNDHSEPISQVLSKMTNGGVDFS 266
Query: 252 IDTVSAVHPLM-PLIGLLKSQGKLVLVGAPE-KPLELPAFSLLMGRKIVGGSMIGGMKET 309
           ++ V  V  +   L   LK  G  VLVG  +   +      L+ GR    GSM GG K  
Sbjct: 267 LECVGNVGVMRNALESCLKGWGVSVLVGWTDLHDVATRPIQLIAGRTW-KGSMFGGFKGK 325
Query: 310 Q---EMIDFAAKHNIRAD---IEVIPADYVNTALERL 340
               +M+       ++ D      +P + VN A++ +
Sbjct: 326 DGVPKMVKAYLDKKVKLDEFITHRMPLESVNDAIDLM 362

>pdb|1F8F|A Chain A, Crystal Structure Of Benzyl Alcohol Dehydrogenase From Acinetobacter Calcoaceticus Length = 371

Iteration: 1
 Score = 60.5 bits (145), Expect = 1e-09,   Method: Compositional matrix adjust.
 Identities = 70/300 (23%), Positives = 121/300 (40%), Gaps = 36/300 (12%)
Query: 32  RRATGEKDVTFKVTHCGICHSDLHMIKNEWGNTIYPIVPGHEIVGVVTEVGSKVSKFKVG 91
           R+  G+ +V  KV   G+CH+DL +++++      P V GHE  G++  +G  V++ +VG
Sbjct: 27  RQPQGD-EVLVKVVATGMCHTDL-IVRDQKYPVPLPAVLGHEGSGIIEAIGPNVTELQVG 84
Query: 92  DKVGVGCMVGSCRSCDSCAIDLENYCPKVIMTYANKYHDGTITYGGYS----DIMVADEH 147
           D V +    G C  C  C      YC +    +  +   G  + G ++    D  V ++H
Sbjct: 85  DHVVLS--YGYCGKCTQCNTGNPAYCSE----FFGRNFSGADSEGNHALCTHDQGVVNDH 138
Query: 148 F----------------VVRIPEGTPLDATAPLLCAGITVYSPLRFYGLD-KPGMXXXXX 190
           F                 V++ +  P++   PL C GI   +      L   P       
Sbjct: 139 FFAQSSFATYALSRENNTVKVTKDVPIELLGPLGC-GIQTGAGACINALKVTPASSFVTW 197
Query: 191 XXXXXXXXXXKFAKAMGVKVTVISTSPSKKSEAIERLGADSFLVSRDQDEMQAAMGTMDG 250
                       AK  G  + +       + E  ++LGA   + S+ QD + A     DG
Sbjct: 198 GAGAVGLSALLAAKVCGASIIIAVDIVESRLELAKQLGATHVINSKTQDPVAAIKEITDG 257
Query: 251 ----IIDTVSAVHPLMPLIGLLKSQGKLVLVGAPE--KPLELPAFSLLMGRKIVGGSMIG 304
                +++  +   L   +  L   GK+ +VGAP+     +     LL+G K + G + G
Sbjct: 258 GVNFALESTGSPEILKQGVDALGILGKIAVVGAPQLGTTAQFDVNDLLLGGKTILGVVEG 317

>pdb|1P0C|A Chain A, Crystal Structure Of The Nadp(H)-Dependent Vertebrate Alcohol Dehydrogenase (Adh8) Length = 373

Iteration: 1
 Score = 59.7 bits (143), Expect = 2e-09,   Method: Compositional matrix adjust.
 Identities = 88/332 (26%), Positives = 135/332 (40%), Gaps = 34/332 (10%)
Query: 39  DVTFKVTHCGICHSDLHMIKNEWGNTIYPIVPGHEIVGVVTEVGSKVSKFKVGDKVGVGC 98
           +V  K+   GIC SD  ++K E   + +P++ GHE VGVV  +G+ V+  K GDKV +  
Sbjct: 36  EVRIKILASGICGSDSSVLK-EIIPSKFPVILGHEAVGVVESIGAGVTCVKPGDKV-IPL 93
Query: 99  MVGSCRSCDSCAIDLENYCPKVIM--------------TYANKYHDGTITYGGYSDIMVA 144
            V  C SC +C     N+C K  M              T   K     +    +++  V 
Sbjct: 94  FVPQCGSCRACKSSNSNFCEKNDMGAKTGLMADMTSRFTCRGKPIYNLMGTSTFTEYTVV 153
Query: 145 DEHFVVRIPEGTPLDATAPLLCAGITVYSPLRFYGLDKPGMXXXXXXXXXXXXXXXKFAK 204
            +  V +I    PL++   + C   T Y          PG                   K
Sbjct: 154 ADIAVAKIDPKAPLESCL-IGCGFATGYGAAVNTAKVTPGSTCAVFGLGGVGFSAIVGCK 212
Query: 205 AMGV-KVTVISTSPSKKSEAIERLGADSFLVSRDQDE------MQAAMGTMDGIIDTVSA 257
           A G  ++  + T   K  +AIE LGA   L  +D D+       +   G +D  ++    
Sbjct: 213 AAGASRIIGVGTHKDKFPKAIE-LGATECLNPKDYDKPIYEVICEKTNGGVDYAVECAGR 271
Query: 258 VHPLM-PLIGLLKSQGKLVLVG--APEKPLELPAFSLLMGRKIVGGSMIGGMK--ETQEM 312
           +  +M  L       G  V++G  +P + L L    LL GR +  GS+ GG K  E   +
Sbjct: 272 IETMMNALQSTYCGSGVTVVLGLASPNERLPLDPLLLLTGRSL-KGSVFGGFKGEEVSRL 330
Query: 313 IDFAAKHNIRADIEV---IPADYVNTALERLA 341
           +D   K  I  +  V   +  D +N A E L+
Sbjct: 331 VDDYMKKKINVNFLVSTKLTLDQINKAFELLS 362

>pdb|4ILK|A Chain A, Crystal Structure Of Short Chain Alcohol Dehydrogenase (rspb) From E. Coli Cft073 (efi Target Efi-506413) Complexed With Cofactor Nadh Length = 359

Iteration: 1
 Score = 58.2 bits (139), Expect = 7e-09,   Method: Compositional matrix adjust.
 Identities = 40/117 (34%), Positives = 54/117 (46%), Gaps = 8/117 (6%)
Query: 39  DVTFKVTHCGICHSDLHMIKNEWGNTIYPIVPGHEIVGVVTEVGSKVSKFKVGDKVGVGC 98
           +V  KV   GIC SD H+ +       YP V GHE  GV+  VG  V   +VG++V V  
Sbjct: 46  EVRVKVKLAGICGSDSHIYRGHNPFAKYPRVIGHEFFGVIDAVGEGVESARVGERVAVDP 105
Query: 99  MVGSCRSCDSCAIDLENYCPKVIMTYANKYHDGTITYGGYSDIMVADEHFVVRIPEG 155
           +V SC  C  C+I   N C  + +        G    GG+S+  V       +IPE 
Sbjct: 106 VV-SCGHCYPCSIGKPNVCTTLAVL-------GVHADGGFSEYAVVPAKNAWKIPEA 154

>pdb|1EE2|B Chain B, The Structure Of Steroid-Active Alcohol Dehydrogenase At 1.54 A Resolution Length = 373

Iteration: 1
 Score = 57.8 bits (138), Expect = 9e-09,   Method: Compositional matrix adjust.
 Identities = 74/336 (22%), Positives = 128/336 (38%), Gaps = 43/336 (12%)
Query: 39  DVTFKVTHCGICHSDLHMIKNEWGNTIYPIVPGHEIVGVVTEVGSKVSKFKVGDKVGVGC 98
           +V  K+   GIC SD H++       + P++ GHE  G+V  +G  V+  + GDKV +  
Sbjct: 35  EVRIKMVAAGICRSDDHVVSGTLVAPL-PVIAGHEAAGIVESIGEGVTTVRPGDKV-IPL 92
Query: 99  MVGSCRSCDSCAIDLENYCPKVIMTYANKYHDGTITY-------------GGYSDIMVAD 145
            +  C  C  C     N C K +        DGT  +               +S   V D
Sbjct: 93  FIPQCGKCSVCKHPEGNLCLKNLSMPRGTMQDGTSRFTCRGKPIHHFLGTSTFSQYTVVD 152
Query: 146 EHFVVRIPEGTPLDATAPLLC------------AGITVYSPLRFYGLDKPGMXXXXXXXX 193
           E  V +I   +PL+    + C            A +T  S    +GL   G+        
Sbjct: 153 EISVAKIDAASPLEKVCLVGCGFSTGYGSAVKVAKVTQGSTCAVFGLGGVGLSVIMGCKA 212
Query: 194 XXXXXXXKFAKAMGVKVTVISTSPSKKSEAIERLGADSFLVSRDQDEMQAAMGTMDGIID 253
                    A+ +GV +     + +K+  A E +    +     +   + + G +D   +
Sbjct: 213 AGA------ARIIGVDINKDKFAKAKEVGATECVNPQDYKKPIQEVLTEMSNGGVDFSFE 266
Query: 254 TVSAVHPLMPLIGLLK-SQGKLVLVGAP--EKPLELPAFSLLMGRKIVGGSMIGGMKETQ 310
            +  +  ++  +   + + G  V+VG P   + L +    LL GR    G++ GG K   
Sbjct: 267 VIGRLDTMVAALSCCQEAYGVSVIVGVPPDSQNLSMNPMLLLSGRTW-KGAIFGGFKSKD 325
Query: 311 E----MIDFAAKHNIRADI--EVIPADYVNTALERL 340
                + DF AK      +   V+P + +N   + L
Sbjct: 326 SVPKLVADFMAKKFALDPLITHVLPFEKINEGFDLL 361

>pdb|1EE2|A Chain A, The Structure Of Steroid-Active Alcohol Dehydrogenase At 1.54 A Resolution Length = 373

Iteration: 1
 Score = 57.8 bits (138), Expect = 1e-08,   Method: Compositional matrix adjust.
 Identities = 74/336 (22%), Positives = 128/336 (38%), Gaps = 43/336 (12%)
Query: 39  DVTFKVTHCGICHSDLHMIKNEWGNTIYPIVPGHEIVGVVTEVGSKVSKFKVGDKVGVGC 98
           +V  K+   GIC SD H++       + P++ GHE  G+V  +G  V+  + GDKV +  
Sbjct: 35  EVRIKMVAAGICRSDDHVVSGTLVAPL-PVIAGHEAAGIVESIGEGVTTVRPGDKV-IPL 92
Query: 99  MVGSCRSCDSCAIDLENYCPKVIMTYANKYHDGTITY-------------GGYSDIMVAD 145
            +  C  C  C     N C K +        DGT  +               +S   V D
Sbjct: 93  FIPQCGKCSVCKHPEGNLCLKNLSMPRGTMQDGTSRFTCRGKPIHHFLGTSTFSQYTVVD 152
Query: 146 EHFVVRIPEGTPLDATAPLLC------------AGITVYSPLRFYGLDKPGMXXXXXXXX 193
           E  V +I   +PL+    + C            A +T  S    +GL   G+        
Sbjct: 153 EISVAKIDAASPLEKVCLVGCGFSTGYGSAVKVAKVTQGSTCAVFGLGGVGLSVIMGCKA 212
Query: 194 XXXXXXXKFAKAMGVKVTVISTSPSKKSEAIERLGADSFLVSRDQDEMQAAMGTMDGIID 253
                    A+ +GV +     + +K+  A E +    +     +   + + G +D   +
Sbjct: 213 AGA------ARIIGVDINKDKFAKAKEVGATECVNPQDYKKPIQEVLTEMSNGGVDFSFE 266
Query: 254 TVSAVHPLMPLIGLLK-SQGKLVLVGAP--EKPLELPAFSLLMGRKIVGGSMIGGMKETQ 310
            +  +  ++  +   + + G  V+VG P   + L +    LL GR    G++ GG K   
Sbjct: 267 VIGRLDTMVAALSCCQEAYGVSVIVGVPPDSQNLSMNPMLLLSGRTW-KGAIFGGFKSKD 325
Query: 311 E----MIDFAAKHNIRADI--EVIPADYVNTALERL 340
                + DF AK      +   V+P + +N   + L
Sbjct: 326 SVPKLVADFMAKKFALDPLITHVLPFEKINEGFDLL 361

>pdb|1E3L|A Chain A, P47h Mutant Of Mouse Class Ii Alcohol Dehydrogenase Complex With Nadh Length = 376

Iteration: 1
 Score = 57.4 bits (137), Expect = 1e-08,   Method: Compositional matrix adjust.
 Identities = 70/335 (20%), Positives = 125/335 (37%), Gaps = 38/335 (11%)
Query: 39  DVTFKVTHCGICHSDLHMIKNEWGNTIYPIVPGHEIVGVVTEVGSKVSKFKVGDKVGVGC 98
           +V  +V    +CH+D++    +    ++P+V GHE  G+V  VG  V+ FK GDKV +  
Sbjct: 35  EVRIQVIATCVCHTDINATDPK-KKALFPVVLGHECAGIVESVGPGVTNFKPGDKV-IPF 92
Query: 99  MVGSCRSCDSCAIDLENYCPKV----------------IMTYANK----YHDGTITYGGY 138
               C+ C  C   L N C K+                   +  K    YH   +    +
Sbjct: 93  FAPQCKRCKLCLSPLTNLCGKLRNFKYPTIDQELMEDRTSRFTCKGRSIYH--FMGVSSF 150
Query: 139 SDIMVADEHFVVRIPEGTPLDATAPLLCAGITVYSPLRFYGLDKPGMXXXXXXXXXXXXX 198
           S   V  E  + R+ +   L+    + C   + Y          PG              
Sbjct: 151 SQYTVVSEANLARVDDEANLERVCLIGCGFSSGYGAAINTAKVTPGSTCAVFGLGCVGLS 210
Query: 199 XXKFAKAMGVKVTVISTSPSKKSEAIERLGADSFLVSRDQDE------MQAAMGTMDGII 252
                K  G    +      +K    + LGA   L  R+ D+       +   G +D  +
Sbjct: 211 AIIGCKIAGASRIIAIDINGEKFPKAKALGATDCLNPRELDKPVQDVITELTAGGVDYSL 270
Query: 253 DTVSAVHPLMPLIGL-LKSQGKLVLVGAPEKPLELPAFSLLMGRKIVGGSMIGGMKETQE 311
           D       L   +   +   G   +VGA    + +P   +++GR I  G+  GG K    
Sbjct: 271 DCAGTAQTLKAAVDCTVLGWGSCTVVGAKVDEMTIPTVDVILGRSI-NGTFFGGWKSVDS 329
Query: 312 MIDFAAKH-NIRADIEV-----IPADYVNTALERL 340
           + +  + + N + D+++     +P + +N A++ +
Sbjct: 330 VPNLVSDYKNKKFDLDLLVTHALPFESINDAIDLM 364

>pdb|1E3J|A Chain A, Ketose Reductase (Sorbitol Dehydrogenase) From Silverleaf Whitefly Length = 352

Iteration: 1
 Score = 57.4 bits (137), Expect = 1e-08,   Method: Compositional matrix adjust.
 Identities = 69/263 (26%), Positives = 112/263 (42%), Gaps = 22/263 (8%)
Query: 37  EKDVTFKVTHCGICHSDLHMIKN-EWGNTIY--PIVPGHEIVGVVTEVGSKVSKFKVGDK 93
           E +V  ++ + GIC SD+H  ++    + I   P+V GHE  G V +VG  V   K GD+
Sbjct: 28  EDEVLLQMAYVGICGSDVHYYEHGRIADFIVKDPMVIGHEASGTVVKVGKNVKHLKKGDR 87
Query: 94  VGVGCMVGSCRSCDSCAIDLENYCPKVIMTYANKYHDGTITYGGYSDIMVADEHFVVRIP 153
           V V   V  CR C  C     N CP   +T+     D     G  +   V    F  ++P
Sbjct: 88  VAVEPGV-PCRRCQFCKEGKYNLCPD--LTFCATPPDD----GNLARYYVHAADFCHKLP 140
Query: 154 EGTPLDATAPLLCAGITVYSPLRFYGLDKPGMXXXXXXXXXXXXXXXKFAKAMGVKVTVI 213
           +   L+  A L    + V++  R  G+ + G                  AKA G  V   
Sbjct: 141 DNVSLEEGALLEPLSVGVHA-CRRAGV-QLGTTVLVIGAGPIGLVSVLAAKAYGAFVVCT 198
Query: 214 STSPSKKSEAIERLGADSFLV--------SRDQDEMQAAMGTMDGIIDTVSAVHPLMPL- 264
           + SP ++ E  +  GAD  LV        S   + +++A+G +  +    S     + + 
Sbjct: 199 ARSP-RRLEVAKNCGADVTLVVDPAKEEESSIIERIRSAIGDLPNVTIDCSGNEKCITIG 257
Query: 265 IGLLKSQGKLVLVGAPEKPLELP 287
           I + ++ G L+LVG   + + +P
Sbjct: 258 INITRTGGTLMLVGMGSQMVTVP 280

>pdb|1AXG|A Chain A, Crystal Structure Of The Val203->ala Mutant Of Liver Alcohol Dehydrogenase Complexed With Cofactor Nad And Inhibitor Trifluoroethanol Solved To 2.5 Angstrom Resolution Length = 374

Iteration: 1
 Score = 56.6 bits (135), Expect = 2e-08,   Method: Compositional matrix adjust.
 Identities = 75/341 (21%), Positives = 130/341 (38%), Gaps = 44/341 (12%)
Query: 39  DVTFKVTHCGICHSDLHMIKNEWGNTIYPIVPGHEIVGVVTEVGSKVSKFKVGDKVGVGC 98
           +V  K+   GIC SD H++      T  P++ GHE  G+V  +G  V+  + GDKV +  
Sbjct: 35  EVRIKMVATGICRSDDHVVSGTL-VTPLPVIAGHEAAGIVESIGEGVTTVRPGDKV-IPL 92
Query: 99  MVGSCRSCDSCAIDLENYCPKVIMTYAN-KYHDGTITY-------------GGYSDIMVA 144
               C  C  C     N+C K  ++       DGT  +               +S   V 
Sbjct: 93  FTPQCGKCRVCKHPEGNFCLKNDLSMPRGTMQDGTSRFTCRGKPIHHFLGTSTFSQYTVV 152
Query: 145 DEHFVVRIPEGTPLDATAPLLC------------AGITVYSPLRFYGLDKPGMXXXXXXX 192
           DE  V +I   +PL+    + C            A +T  S    +GL   G+       
Sbjct: 153 DEISVAKIDAASPLEKVCLIGCGFSTGYGSAVKVAKVTQGSTCAVFGLGGAGLSVIMGCK 212
Query: 193 XXXXXXXXKFAKAMGVKVTVISTSPSKKSEAIERLGADSFLVSRDQDEMQAAMGTMDGII 252
                     A+ +GV +     + +K+  A E +    +     +   + + G +D   
Sbjct: 213 AAGA------ARIIGVDINKDKFAKAKEVGATECVNPQDYKKPIQEVLTEMSNGGVDFSF 266
Query: 253 DTVSAVHPLMPLIGLLK-SQGKLVLVGAP--EKPLELPAFSLLMGRKIVGGSMIGGMKET 309
           + +  +  ++  +   + + G  V+VG P   + L +    LL GR    G++ GG K  
Sbjct: 267 EVIGRLDTMVTALSCCQEAYGVSVIVGVPPDSQNLSMNPMLLLSGRTW-KGAIFGGFKSK 325
Query: 310 QE----MIDFAAKHNIRADI--EVIPADYVNTALERLAKAD 344
                 + DF AK      +   V+P + +N   + L   +
Sbjct: 326 DSVPKLVADFMAKKFALDPLITHVLPFEKINEGFDLLRSGE 366

>pdb|1A71|A Chain A, Ternary Complex Of An Active Site Double Mutant Of Horse Liver Alcohol Dehydrogenase, Phe93>trp, Val203>ala With Nad And Trifluoroethanol Length = 374

Iteration: 1
 Score = 56.6 bits (135), Expect = 2e-08,   Method: Compositional matrix adjust.
 Identities = 75/341 (21%), Positives = 130/341 (38%), Gaps = 44/341 (12%)
Query: 39  DVTFKVTHCGICHSDLHMIKNEWGNTIYPIVPGHEIVGVVTEVGSKVSKFKVGDKVGVGC 98
           +V  K+   GIC SD H++      T  P++ GHE  G+V  +G  V+  + GDKV +  
Sbjct: 35  EVRIKMVATGICRSDDHVVSGTL-VTPLPVIAGHEAAGIVESIGEGVTTVRPGDKV-IPL 92
Query: 99  MVGSCRSCDSCAIDLENYCPKVIMTYAN-KYHDGTITY-------------GGYSDIMVA 144
               C  C  C     N+C K  ++       DGT  +               +S   V 
Sbjct: 93  WTPQCGKCRVCKHPEGNFCLKNDLSMPRGTMQDGTSRFTCRGKPIHHFLGTSTFSQYTVV 152
Query: 145 DEHFVVRIPEGTPLDATAPLLC------------AGITVYSPLRFYGLDKPGMXXXXXXX 192
           DE  V +I   +PL+    + C            A +T  S    +GL   G+       
Sbjct: 153 DEISVAKIDAASPLEKVCLIGCGFSTGYGSAVKVAKVTQGSTCAVFGLGGAGLSVIMGCK 212
Query: 193 XXXXXXXXKFAKAMGVKVTVISTSPSKKSEAIERLGADSFLVSRDQDEMQAAMGTMDGII 252
                     A+ +GV +     + +K+  A E +    +     +   + + G +D   
Sbjct: 213 AAGA------ARIIGVDINKDKFAKAKEVGATECVNPQDYKKPIQEVLTEMSNGGVDFSF 266
Query: 253 DTVSAVHPLMPLIGLLK-SQGKLVLVGAP--EKPLELPAFSLLMGRKIVGGSMIGGMKET 309
           + +  +  ++  +   + + G  V+VG P   + L +    LL GR    G++ GG K  
Sbjct: 267 EVIGRLDTMVTALSCCQEAYGVSVIVGVPPDSQNLSMNPMLLLSGRTW-KGAIFGGFKSK 325
Query: 310 QE----MIDFAAKHNIRADI--EVIPADYVNTALERLAKAD 344
                 + DF AK      +   V+P + +N   + L   +
Sbjct: 326 DSVPKLVADFMAKKFALDPLITHVLPFEKINEGFDLLRSGE 366

>pdb|6ADH|A Chain A, Structure Of Triclinic Ternary Complex Of Horse Liver Alcohol Dehydrogenase At 2.9 Angstroms Resolution Length = 374

Iteration: 1
 Score = 56.2 bits (134), Expect = 3e-08,   Method: Compositional matrix adjust.
 Identities = 75/341 (21%), Positives = 130/341 (38%), Gaps = 44/341 (12%)
Query: 39  DVTFKVTHCGICHSDLHMIKNEWGNTIYPIVPGHEIVGVVTEVGSKVSKFKVGDKVGVGC 98
           +V  K+   GIC SD H++      T  P++ GHE  G+V  +G  V+  + GDKV +  
Sbjct: 35  EVRIKMVATGICRSDDHVVSGTL-VTPLPVIAGHEAAGIVESIGEGVTTVRPGDKV-IPL 92
Query: 99  MVGSCRSCDSCAIDLENYCPKVIMTYAN-KYHDGTITY-------------GGYSDIMVA 144
               C  C  C     N+C K  ++       DGT  +               +S   V 
Sbjct: 93  FTPQCGKCRVCKHPEGNFCLKNDLSMPRGTMQDGTSRFTCRGKPIHHFLGTSTFSQYTVV 152
Query: 145 DEHFVVRIPEGTPLDATAPLLC------------AGITVYSPLRFYGLDKPGMXXXXXXX 192
           DE  V +I   +PL+    + C            A +T  S    +GL   G+       
Sbjct: 153 DEISVAKIDAASPLEKVCLIGCGFSTGYGSAVKVAKVTQGSTCAVFGLGGVGLSVIMGCK 212
Query: 193 XXXXXXXXKFAKAMGVKVTVISTSPSKKSEAIERLGADSFLVSRDQDEMQAAMGTMDGII 252
                     A+ +GV +     + +K+  A E +    +     +   + + G +D   
Sbjct: 213 AAGA------ARIIGVDINKDKFAKAKEVGATECVNPQDYKKPIQEVLTEMSNGGVDFSF 266
Query: 253 DTVSAVHPLMPLIGLLK-SQGKLVLVGAP--EKPLELPAFSLLMGRKIVGGSMIGGMKET 309
           + +  +  ++  +   + + G  V+VG P   + L +    LL GR    G++ GG K  
Sbjct: 267 EVIGRLDTMVTALSCCQEAYGVSVIVGVPPDSQNLSMNPMLLLSGRTW-KGAIFGGFKSK 325
Query: 310 QE----MIDFAAKHNIRADI--EVIPADYVNTALERLAKAD 344
                 + DF AK      +   V+P + +N   + L   +
Sbjct: 326 DSVPKLVADFMAKKFALDPLITHVLPFEKINEGFDLLRSGE 366

>pdb|1AXE|A Chain A, Crystal Structure Of The Active-Site Mutant Phe93->trp Of Horse Liver Alcohol Dehydrogenase In Complex With Nad And Inhibitor Trifluoroethanol Length = 374

Iteration: 1
 Score = 55.8 bits (133), Expect = 3e-08,   Method: Compositional matrix adjust.
 Identities = 75/341 (21%), Positives = 130/341 (38%), Gaps = 44/341 (12%)
Query: 39  DVTFKVTHCGICHSDLHMIKNEWGNTIYPIVPGHEIVGVVTEVGSKVSKFKVGDKVGVGC 98
           +V  K+   GIC SD H++      T  P++ GHE  G+V  +G  V+  + GDKV +  
Sbjct: 35  EVRIKMVATGICRSDDHVVSGTL-VTPLPVIAGHEAAGIVESIGEGVTTVRPGDKV-IPL 92
Query: 99  MVGSCRSCDSCAIDLENYCPKVIMTYAN-KYHDGTITY-------------GGYSDIMVA 144
               C  C  C     N+C K  ++       DGT  +               +S   V 
Sbjct: 93  WTPQCGKCRVCKHPEGNFCLKNDLSMPRGTMQDGTSRFTCRGKPIHHFLGTSTFSQYTVV 152
Query: 145 DEHFVVRIPEGTPLDATAPLLC------------AGITVYSPLRFYGLDKPGMXXXXXXX 192
           DE  V +I   +PL+    + C            A +T  S    +GL   G+       
Sbjct: 153 DEISVAKIDAASPLEKVCLIGCGFSTGYGSAVKVAKVTQGSTCAVFGLGGVGLSVIMGCK 212
Query: 193 XXXXXXXXKFAKAMGVKVTVISTSPSKKSEAIERLGADSFLVSRDQDEMQAAMGTMDGII 252
                     A+ +GV +     + +K+  A E +    +     +   + + G +D   
Sbjct: 213 AAGA------ARIIGVDINKDKFAKAKEVGATECVNPQDYKKPIQEVLTEMSNGGVDFSF 266
Query: 253 DTVSAVHPLMPLIGLLK-SQGKLVLVGAP--EKPLELPAFSLLMGRKIVGGSMIGGMKET 309
           + +  +  ++  +   + + G  V+VG P   + L +    LL GR    G++ GG K  
Sbjct: 267 EVIGRLDTMVTALSCCQEAYGVSVIVGVPPDSQNLSMNPMLLLSGRTW-KGAIFGGFKSK 325
Query: 310 QE----MIDFAAKHNIRADI--EVIPADYVNTALERLAKAD 344
                 + DF AK      +   V+P + +N   + L   +
Sbjct: 326 DSVPKLVADFMAKKFALDPLITHVLPFEKINEGFDLLRSGE 366

>pdb|3OQ6|A Chain A, Horse Liver Alcohol Dehydrogenase A317c Mutant Complexed With Nad+ And 2,3,4,5,6-Pentafluorobenzyl Alcohol Length = 374

Iteration: 1
 Score = 55.5 bits (132), Expect = 4e-08,   Method: Compositional matrix adjust.
 Identities = 75/341 (21%), Positives = 129/341 (37%), Gaps = 44/341 (12%)
Query: 39  DVTFKVTHCGICHSDLHMIKNEWGNTIYPIVPGHEIVGVVTEVGSKVSKFKVGDKVGVGC 98
           +V  K+   GIC SD H++      T  P++ GHE  G+V  +G  V+  + GDKV +  
Sbjct: 35  EVRIKMVATGICRSDDHVVSGTL-VTPLPVIAGHEAAGIVESIGEGVTTVRPGDKV-IPL 92
Query: 99  MVGSCRSCDSCAIDLENYCPKVIMTYAN-KYHDGTITY-------------GGYSDIMVA 144
               C  C  C     N+C K  ++       DGT  +               +S   V 
Sbjct: 93  FTPQCGKCRVCKHPEGNFCLKNDLSMPRGTMQDGTSRFTCRGKPIHHFLGTSTFSQYTVV 152
Query: 145 DEHFVVRIPEGTPLDATAPLLC------------AGITVYSPLRFYGLDKPGMXXXXXXX 192
           DE  V +I   +PL+    + C            A +T  S    +GL   G+       
Sbjct: 153 DEISVAKIDAASPLEKVCLIGCGFSTGYGSAVKVAKVTQGSTCAVFGLGGVGLSVIMGCK 212
Query: 193 XXXXXXXXKFAKAMGVKVTVISTSPSKKSEAIERLGADSFLVSRDQDEMQAAMGTMDGII 252
                     A+ +GV +     + +K+  A E +    +     +   + + G +D   
Sbjct: 213 AAGA------ARIIGVDINKDKFAKAKEVGATECVNPQDYKKPIQEVLTEMSNGGVDFSF 266
Query: 253 DTVSAVHPLMPLIGLLK-SQGKLVLVGAP--EKPLELPAFSLLMGRKIVGGSMIGGMKET 309
           + +  +  ++  +   + + G  V+VG P   + L +    LL GR    G + GG K  
Sbjct: 267 EVIGRLDTMVTALSCCQEAYGVSVIVGVPPDSQNLSMNPMLLLSGRTW-KGCIFGGFKSK 325
Query: 310 QE----MIDFAAKHNIRADI--EVIPADYVNTALERLAKAD 344
                 + DF AK      +   V+P + +N   + L   +
Sbjct: 326 DSVPKLVADFMAKKFALDPLITHVLPFEKINEGFDLLRSGE 366

>pdb|1MGO|A Chain A, Horse Liver Alcohol Dehydrogenase Phe93ala Mutant Length = 374

Iteration: 1
 Score = 55.5 bits (132), Expect = 4e-08,   Method: Compositional matrix adjust.
 Identities = 75/341 (21%), Positives = 130/341 (38%), Gaps = 44/341 (12%)
Query: 39  DVTFKVTHCGICHSDLHMIKNEWGNTIYPIVPGHEIVGVVTEVGSKVSKFKVGDKVGVGC 98
           +V  K+   GIC SD H++      T  P++ GHE  G+V  +G  V+  + GDKV +  
Sbjct: 35  EVRIKMVATGICRSDDHVVSGTL-VTPLPVIAGHEAAGIVESIGEGVTTVRPGDKV-IPL 92
Query: 99  MVGSCRSCDSCAIDLENYCPKVIMTYAN-KYHDGTITY-------------GGYSDIMVA 144
               C  C  C     N+C K  ++       DGT  +               +S   V 
Sbjct: 93  ATPQCGKCRVCKHPEGNFCLKNDLSMPRGTMQDGTSRFTCRGKPIHHFLGTSTFSQYTVV 152
Query: 145 DEHFVVRIPEGTPLDATAPLLC------------AGITVYSPLRFYGLDKPGMXXXXXXX 192
           DE  V +I   +PL+    + C            A +T  S    +GL   G+       
Sbjct: 153 DEISVAKIDAASPLEKVCLIGCGFSTGYGSAVKVAKVTQGSTCAVFGLGGVGLSVIMGCK 212
Query: 193 XXXXXXXXKFAKAMGVKVTVISTSPSKKSEAIERLGADSFLVSRDQDEMQAAMGTMDGII 252
                     A+ +GV +     + +K+  A E +    +     +   + + G +D   
Sbjct: 213 AAGA------ARIIGVDINKDKFAKAKEVGATECVNPQDYKKPIQEVLTEMSNGGVDFSF 266
Query: 253 DTVSAVHPLMPLIGLLK-SQGKLVLVGAP--EKPLELPAFSLLMGRKIVGGSMIGGMKET 309
           + +  +  ++  +   + + G  V+VG P   + L +    LL GR    G++ GG K  
Sbjct: 267 EVIGRLDTMVTALSCCQEAYGVSVIVGVPPDSQNLSMNPMLLLSGRTW-KGAIFGGFKSK 325
Query: 310 QE----MIDFAAKHNIRADI--EVIPADYVNTALERLAKAD 344
                 + DF AK      +   V+P + +N   + L   +
Sbjct: 326 DSVPKLVADFMAKKFALDPLITHVLPFEKINEGFDLLRSGE 366

>pdb|1N8K|A Chain A, Horse Liver Alcohol Dehydrogenase Val292thr Mutant Complexed To Nad+ And Pyrazole Length = 374

Iteration: 1
 Score = 54.7 bits (130), Expect = 9e-08,   Method: Compositional matrix adjust.
 Identities = 74/341 (21%), Positives = 129/341 (37%), Gaps = 44/341 (12%)
Query: 39  DVTFKVTHCGICHSDLHMIKNEWGNTIYPIVPGHEIVGVVTEVGSKVSKFKVGDKVGVGC 98
           +V  K+   GIC SD H++      T  P++ GHE  G+V  +G  V+  + GDKV +  
Sbjct: 35  EVRIKMVATGICRSDDHVVSGTL-VTPLPVIAGHEAAGIVESIGEGVTTVRPGDKV-IPL 92
Query: 99  MVGSCRSCDSCAIDLENYCPKVIMTYAN-KYHDGTITY-------------GGYSDIMVA 144
               C  C  C     N+C K  ++       DGT  +               +S   V 
Sbjct: 93  FTPQCGKCRVCKHPEGNFCLKNDLSMPRGTMQDGTSRFTCRGKPIHHFLGTSTFSQYTVV 152
Query: 145 DEHFVVRIPEGTPLDATAPLLC------------AGITVYSPLRFYGLDKPGMXXXXXXX 192
           DE  V +I   +PL+    + C            A +T  S    +GL   G+       
Sbjct: 153 DEISVAKIDAASPLEKVCLIGCGFSTGYGSAVKVAKVTQGSTCAVFGLGGVGLSVIMGCK 212
Query: 193 XXXXXXXXKFAKAMGVKVTVISTSPSKKSEAIERLGADSFLVSRDQDEMQAAMGTMDGII 252
                     A+ +GV +     + +K+  A E +    +     +   + + G +D   
Sbjct: 213 AAGA------ARIIGVDINKDKFAKAKEVGATECVNPQDYKKPIQEVLTEMSNGGVDFSF 266
Query: 253 DTVSAVHPLMPLIGLLK-SQGKLVLVGAP--EKPLELPAFSLLMGRKIVGGSMIGGMKET 309
           + +  +  ++  +   + + G  V+ G P   + L +    LL GR    G++ GG K  
Sbjct: 267 EVIGRLDTMVTALSCCQEAYGVSVITGVPPDSQNLSMNPMLLLSGRTW-KGAIFGGFKSK 325
Query: 310 QE----MIDFAAKHNIRADI--EVIPADYVNTALERLAKAD 344
                 + DF AK      +   V+P + +N   + L   +
Sbjct: 326 DSVPKLVADFMAKKFALDPLITHVLPFEKINEGFDLLRSGE 366

>pdb|1JU9|A Chain A, Horse Liver Alcohol Dehydrogenase Val292ser Mutant Length = 374

Iteration: 1
 Score = 53.9 bits (128), Expect = 1e-07,   Method: Compositional matrix adjust.
 Identities = 74/341 (21%), Positives = 129/341 (37%), Gaps = 44/341 (12%)
Query: 39  DVTFKVTHCGICHSDLHMIKNEWGNTIYPIVPGHEIVGVVTEVGSKVSKFKVGDKVGVGC 98
           +V  K+   GIC SD H++      T  P++ GHE  G+V  +G  V+  + GDKV +  
Sbjct: 35  EVRIKMVATGICRSDDHVVSGTL-VTPLPVIAGHEAAGIVESIGEGVTTVRPGDKV-IPL 92
Query: 99  MVGSCRSCDSCAIDLENYCPKVIMTYAN-KYHDGTITY-------------GGYSDIMVA 144
               C  C  C     N+C K  ++       DGT  +               +S   V 
Sbjct: 93  FTPQCGKCRVCKHPEGNFCLKNDLSMPRGTMQDGTSRFTCRGKPIHHFLGTSTFSQYTVV 152
Query: 145 DEHFVVRIPEGTPLDATAPLLC------------AGITVYSPLRFYGLDKPGMXXXXXXX 192
           DE  V +I   +PL+    + C            A +T  S    +GL   G+       
Sbjct: 153 DEISVAKIDAASPLEKVCLIGCGFSTGYGSAVKVAKVTQGSTCAVFGLGGVGLSVIMGCK 212
Query: 193 XXXXXXXXKFAKAMGVKVTVISTSPSKKSEAIERLGADSFLVSRDQDEMQAAMGTMDGII 252
                     A+ +GV +     + +K+  A E +    +     +   + + G +D   
Sbjct: 213 AAGA------ARIIGVDINKDKFAKAKEVGATECVNPQDYKKPIQEVLTEMSNGGVDFSF 266
Query: 253 DTVSAVHPLMPLIGLLK-SQGKLVLVGAP--EKPLELPAFSLLMGRKIVGGSMIGGMKET 309
           + +  +  ++  +   + + G  V+ G P   + L +    LL GR    G++ GG K  
Sbjct: 267 EVIGRLDTMVTALSCCQEAYGVSVISGVPPDSQNLSMNPMLLLSGRTW-KGAIFGGFKSK 325
Query: 310 QE----MIDFAAKHNIRADI--EVIPADYVNTALERLAKAD 344
                 + DF AK      +   V+P + +N   + L   +
Sbjct: 326 DSVPKLVADFMAKKFALDPLITHVLPFEKINEGFDLLRSGE 366

>pdb|1E3E|A Chain A, Mouse Class Ii Alcohol Dehydrogenase Complex With Nadh Length = 376

Iteration: 1
 Score = 53.5 bits (127), Expect = 2e-07,   Method: Compositional matrix adjust.
 Identities = 69/335 (20%), Positives = 124/335 (37%), Gaps = 38/335 (11%)
Query: 39  DVTFKVTHCGICHSDLHMIKNEWGNTIYPIVPGHEIVGVVTEVGSKVSKFKVGDKVGVGC 98
           +V  +V    +C +D++    +    ++P+V GHE  G+V  VG  V+ FK GDKV +  
Sbjct: 35  EVRIQVIATCVCPTDINATDPK-KKALFPVVLGHECAGIVESVGPGVTNFKPGDKV-IPF 92
Query: 99  MVGSCRSCDSCAIDLENYCPKV----------------IMTYANK----YHDGTITYGGY 138
               C+ C  C   L N C K+                   +  K    YH   +    +
Sbjct: 93  FAPQCKRCKLCLSPLTNLCGKLRNFKYPTIDQELMEDRTSRFTCKGRSIYH--FMGVSSF 150
Query: 139 SDIMVADEHFVVRIPEGTPLDATAPLLCAGITVYSPLRFYGLDKPGMXXXXXXXXXXXXX 198
           S   V  E  + R+ +   L+    + C   + Y          PG              
Sbjct: 151 SQYTVVSEANLARVDDEANLERVCLIGCGFSSGYGAAINTAKVTPGSTCAVFGLGCVGLS 210
Query: 199 XXKFAKAMGVKVTVISTSPSKKSEAIERLGADSFLVSRDQDE------MQAAMGTMDGII 252
                K  G    +      +K    + LGA   L  R+ D+       +   G +D  +
Sbjct: 211 AIIGCKIAGASRIIAIDINGEKFPKAKALGATDCLNPRELDKPVQDVITELTAGGVDYSL 270
Query: 253 DTVSAVHPLMPLIGL-LKSQGKLVLVGAPEKPLELPAFSLLMGRKIVGGSMIGGMKETQE 311
           D       L   +   +   G   +VGA    + +P   +++GR I  G+  GG K    
Sbjct: 271 DCAGTAQTLKAAVDCTVLGWGSCTVVGAKVDEMTIPTVDVILGRSI-NGTFFGGWKSVDS 329
Query: 312 MIDFAAKH-NIRADIEV-----IPADYVNTALERL 340
           + +  + + N + D+++     +P + +N A++ +
Sbjct: 330 VPNLVSDYKNKKFDLDLLVTHALPFESINDAIDLM 364

>pdb|3COS|A Chain A, Crystal Structure Of Human Class Ii Alcohol Dehydrogenase (Adh4) In Complex With Nad And Zn Length = 381

Iteration: 1
 Score = 53.5 bits (127), Expect = 2e-07,   Method: Compositional matrix adjust.
 Identities = 26/82 (31%), Positives = 43/82 (52%), Gaps = 1/82 (1%)
Query: 39  DVTFKVTHCGICHSDLHMIKNEWGNTIYPIVPGHEIVGVVTEVGSKVSKFKVGDKVGVGC 98
           +V  ++    +CH+D  +I +++    +P++ GHE  G+V  +G  V+  K GDKV +  
Sbjct: 37  EVRIQIIATSLCHTDATVIDSKFEGLAFPVIVGHEAAGIVESIGPGVTNVKPGDKV-IPL 95
Query: 99  MVGSCRSCDSCAIDLENYCPKV 120
               CR C  C   L N C K+
Sbjct: 96  YAPLCRKCKFCLSPLTNLCGKI 117

>pdb|1QV6|A Chain A, Horse Liver Alcohol Dehydrogenase His51glnLYS228ARG MUTANT Complexed With Nad+ And 2,4-Difluorobenzyl Alcohol Length = 374

Iteration: 1
 Score = 53.5 bits (127), Expect = 2e-07,   Method: Compositional matrix adjust.
 Identities = 74/341 (21%), Positives = 129/341 (37%), Gaps = 44/341 (12%)
Query: 39  DVTFKVTHCGICHSDLHMIKNEWGNTIYPIVPGHEIVGVVTEVGSKVSKFKVGDKVGVGC 98
           +V  K+   GIC SD  ++      T  P++ GHE  G+V  +G  V+  + GDKV +  
Sbjct: 35  EVRIKMVATGICRSDDQVVSGTL-VTPLPVIAGHEAAGIVESIGEGVTTVRPGDKV-IPL 92
Query: 99  MVGSCRSCDSCAIDLENYCPKVIMTYAN-KYHDGTITY-------------GGYSDIMVA 144
               C  C  C     N+C K  ++       DGT  +               +S   V 
Sbjct: 93  FTPQCGKCRVCKHPEGNFCLKNDLSMPRGTMQDGTSRFTCRGKPIHHFLGTSTFSQYTVV 152
Query: 145 DEHFVVRIPEGTPLDATAPLLC------------AGITVYSPLRFYGLDKPGMXXXXXXX 192
           DE  V +I   +PL+    + C            A +T  S    +GL   G+       
Sbjct: 153 DEISVAKIDAASPLEKVCLIGCGFSTGYGSAVKVAKVTQGSTCAVFGLGGVGLSVIMGCK 212
Query: 193 XXXXXXXXKFAKAMGVKVTVISTSPSKKSEAIERLGADSFLVSRDQDEMQAAMGTMDGII 252
                     A+ +GV +     + +K+  A E +    +     +   + + G +D   
Sbjct: 213 AAGA------ARIIGVDINKDRFAKAKEVGATECVNPQDYKKPIQEVLTEMSNGGVDFSF 266
Query: 253 DTVSAVHPLMPLIGLLK-SQGKLVLVGAP--EKPLELPAFSLLMGRKIVGGSMIGGMKET 309
           + +  +  ++  +   + + G  V+VG P   + L +    LL GR    G++ GG K  
Sbjct: 267 EVIGRLDTMVTALSCCQEAYGVSVIVGVPPDSQNLSMNPMLLLSGRTW-KGAIFGGFKSK 325
Query: 310 QE----MIDFAAKHNIRADI--EVIPADYVNTALERLAKAD 344
                 + DF AK      +   V+P + +N   + L   +
Sbjct: 326 DSVPKLVADFMAKKFALDPLITHVLPFEKINEGFDLLRSGE 366

>pdb|1TEH|A Chain A, Structure Of Human Liver Chichi Alcohol Dehydrogenase (A Glutathione- Dependent Formaldehyde Dehydrogenase) Length = 373

Iteration: 1
 Score = 52.8 bits (125), Expect = 3e-07,   Method: Compositional matrix adjust.
 Identities = 42/148 (28%), Positives = 62/148 (41%), Gaps = 15/148 (10%)
Query: 39  DVTFKVTHCGICHSDLHMIKNEWGNTIYPIVPGHEIVGVVTEVGSKVSKFKVGDKVGVGC 98
           +V  K+    +CH+D + +        +P++ GHE  G+V  VG  V+K K GD V +  
Sbjct: 33  EVRIKIIATAVCHTDAYTLSGADPEGCFPVILGHEGAGIVESVGEGVTKLKAGDTV-IPL 91
Query: 99  MVGSCRSCDSCAIDLENYCPKVIMTYANKYH-DGT----------ITYGG---YSDIMVA 144
            +  C  C  C     N C K+ +T       DGT          + Y G   +S+  V 
Sbjct: 92  YIPQCGECKFCLNPKTNLCQKIRVTQGKGLMPDGTSRFTCKGKTILHYMGTSTFSEYTVV 151
Query: 145 DEHFVVRIPEGTPLDATAPLLCAGITVY 172
            +  V +I    PLD    L C   T Y
Sbjct: 152 ADISVAKIDPLAPLDKVCLLGCGISTGY 179

>pdb|1MC5|A Chain A, Ternary Complex Of Human Glutathione-Dependent Formaldehyde Dehydrogenase With S-(Hydroxymethyl)glutathione And Nadh Length = 374

Iteration: 1
 Score = 52.8 bits (125), Expect = 3e-07,   Method: Compositional matrix adjust.
 Identities = 42/148 (28%), Positives = 62/148 (41%), Gaps = 15/148 (10%)
Query: 39  DVTFKVTHCGICHSDLHMIKNEWGNTIYPIVPGHEIVGVVTEVGSKVSKFKVGDKVGVGC 98
           +V  K+    +CH+D + +        +P++ GHE  G+V  VG  V+K K GD V +  
Sbjct: 34  EVRIKIIATAVCHTDAYTLSGADPEGCFPVILGHEGAGIVESVGEGVTKLKAGDTV-IPL 92
Query: 99  MVGSCRSCDSCAIDLENYCPKVIMTYANKYH-DGT----------ITYGG---YSDIMVA 144
            +  C  C  C     N C K+ +T       DGT          + Y G   +S+  V 
Sbjct: 93  YIPQCGECKFCLNPKTNLCQKIRVTQGKGLMPDGTSRFTCKGKTILHYMGTSTFSEYTVV 152
Query: 145 DEHFVVRIPEGTPLDATAPLLCAGITVY 172
            +  V +I    PLD    L C   T Y
Sbjct: 153 ADISVAKIDPLAPLDKVCLLGCGISTGY 180

>pdb|3QJ5|A Chain A, S-Nitrosoglutathione Reductase (Gsnor) In Complex With N6022 Length = 374

Iteration: 1
 Score = 52.8 bits (125), Expect = 3e-07,   Method: Compositional matrix adjust.
 Identities = 42/148 (28%), Positives = 62/148 (41%), Gaps = 15/148 (10%)
Query: 39  DVTFKVTHCGICHSDLHMIKNEWGNTIYPIVPGHEIVGVVTEVGSKVSKFKVGDKVGVGC 98
           +V  K+    +CH+D + +        +P++ GHE  G+V  VG  V+K K GD V +  
Sbjct: 34  EVRIKIIATAVCHTDAYTLSGADPEGCFPVILGHEGAGIVESVGEGVTKLKAGDTV-IPL 92
Query: 99  MVGSCRSCDSCAIDLENYCPKVIMTYANKYH-DGT----------ITYGG---YSDIMVA 144
            +  C  C  C     N C K+ +T       DGT          + Y G   +S+  V 
Sbjct: 93  YIPQCGECKFCLNPKTNLCQKIRVTQGKGLMPDGTSRFTCKGKTILHYMGTSTFSEYTVV 152
Query: 145 DEHFVVRIPEGTPLDATAPLLCAGITVY 172
            +  V +I    PLD    L C   T Y
Sbjct: 153 ADISVAKIDPLAPLDKVCLLGCGISTGY 180

>pdb|1QLH|A Chain A, Horse Liver Alcohol Dehydrogenase Complexed To Nad Double Mutant Of Gly 293 Ala And Pro 295 Thr Length = 374

Iteration: 1
 Score = 52.8 bits (125), Expect = 3e-07,   Method: Compositional matrix adjust.
 Identities = 41/148 (27%), Positives = 61/148 (41%), Gaps = 16/148 (10%)
Query: 39  DVTFKVTHCGICHSDLHMIKNEWGNTIYPIVPGHEIVGVVTEVGSKVSKFKVGDKVGVGC 98
           +V  K+   GIC SD H++      T  P++ GHE  G+V  +G  V+  + GDKV +  
Sbjct: 35  EVRIKMVATGICRSDDHVVSGTL-VTPLPVIAGHEAAGIVESIGEGVTTVRPGDKV-IPL 92
Query: 99  MVGSCRSCDSCAIDLENYCPKVIMTYAN-KYHDGTITY-------------GGYSDIMVA 144
               C  C  C     N+C K  ++       DGT  +               +S   V 
Sbjct: 93  FTPQCGKCRVCKHPEGNFCLKNDLSMPRGTMQDGTSRFTCRGKPIHHFLGTSTFSQYTVV 152
Query: 145 DEHFVVRIPEGTPLDATAPLLCAGITVY 172
           DE  V +I   +PL+    + C   T Y
Sbjct: 153 DEISVAKIDAASPLEKVCLIGCGFSTGY 180

>pdb|3GFB|A Chain A, L-Threonine Dehydrogenase (Tktdh) From The Hyperthermophilic Archaeon Thermococcus Kodakaraensis Length = 350

Iteration: 1
 Score = 52.4 bits (124), Expect = 4e-07,   Method: Compositional matrix adjust.
 Identities = 56/232 (24%), Positives = 92/232 (39%), Gaps = 42/232 (18%)
Query: 36  GEKDVTFKVTHCGICHSDLHMIK-NEWGNTIY--PIVPGHEIVGVVTEVGSKVSKFKVGD 92
           G  +V  KV    IC +DLH+ + NEW  +    P + GHE+ G V EVG  V   +VGD
Sbjct: 28  GPGEVLIKVLATSICGTDLHIYEWNEWAQSRIKPPQIMGHEVAGEVVEVGPGVEDLQVGD 87
Query: 93  KVGVGCMVGSCRSCDSCAIDLENYCPKVIMTYANKYHDGTITYGGYSDIMVAD------- 145
            + V   +  C  C +C  +  + C    +   +   DG   +  Y+ +   +       
Sbjct: 88  YISVETHI-VCGKCYACKHNRYHVCQNTKIFGVDM--DGVFAH--YAIVPAKNAWKNPKD 142
Query: 146 ---EHFVVRIPEGTPLDATAPLLCAG----ITVYSPLRFYGLDKPGMXXXXXXXXXXXXX 198
              E+  ++ P G  +D       AG    IT   PL   G+                  
Sbjct: 143 MPPEYAALQEPLGNAVDTVLAGPIAGRSTLITGAGPLGLLGI------------------ 184
Query: 199 XXKFAKAMGVKVTVISTSPSKKSEAIERLGADSFLVSRDQDEMQAAMGTMDG 250
               AKA G    ++S     + +  +++GAD  +   ++D ++  M   DG
Sbjct: 185 --AVAKASGAYPVIVSEPSEFRRKLAKKVGADYVVNPFEEDPVKFVMDITDG 234

>pdb|2DQ4|A Chain A, Crystal Structure Of Threonine 3-Dehydrogenase Length = 343

Iteration: 1
 Score = 51.6 bits (122), Expect = 6e-07,   Method: Compositional matrix adjust.
 Identities = 69/301 (22%), Positives = 115/301 (38%), Gaps = 26/301 (8%)
Query: 36  GEKDVTFKVTHCGICHSDLHMIK-NEW--GNTIYPIVPGHEIVGVVTEVGSKVSKFKVGD 92
           G  ++  +V    IC +DLH+ K + W  G    P+V GHE  GVV  VG  V + +VGD
Sbjct: 24  GPGEILVRVEAASICGTDLHIWKWDAWARGRIRPPLVTGHEFSGVVEAVGPGVRRPQVGD 83
Query: 93  KVGVGCMVGSCRSCDSCAIDLENYCPKVIMTYANKYHDGTITYGGYSDIMVADEHFVVRI 152
            V +   +  C +C +C     + C        N    G    GG+++ +V         
Sbjct: 84  HVSLESHI-VCHACPACRTGNYHVC-------LNTQILGVDRDGGFAEYVVVPAENAWVN 135
Query: 153 PEGTPLDATAPLLCAGITVYSPLRFYGLDKPGMXXXXXXXXXXXXXXXKFAKAMGVKVTV 212
           P+  P +  A L   G  V++   + G    G                   +A G    +
Sbjct: 136 PKDLPFEVAAILEPFGNAVHT--VYAGSGVSGKSVLITGAGPIGLMAAMVVRASGAGPIL 193
Query: 213 ISTSPSKKSEAIERLGADSFLVSRDQDEMQAAMGTMDGIIDTV-------SAVHP-LMPL 264
           +S  P+    A  R  AD  +   ++D ++         ++ +       +A+H  LM L
Sbjct: 194 VS-DPNPYRLAFARPYADRLVNPLEEDLLEVVRRVTGSGVEVLLEFSGNEAAIHQGLMAL 252
Query: 265 IGLLKSQGKLVLVGAPEKPLELPAFSLLMGRKIVGGSMIGGMKETQEMIDFAAKHNIRAD 324
           I      G+  ++G P  P+       L+ R I    + G       M   A  ++ R D
Sbjct: 253 I----PGGEARILGIPSDPIRFDLAGELVMRGITAFGIAGRRLWQTWMQGTALVYSGRVD 308
Query: 325 I 325
           +
Sbjct: 309 L 309

>pdb|2DFV|A Chain A, Hyperthermophilic Threonine Dehydrogenase From Pyrococcus Horikoshii Length = 347

Iteration: 1
 Score = 51.6 bits (122), Expect = 7e-07,   Method: Compositional matrix adjust.
 Identities = 56/222 (25%), Positives = 88/222 (39%), Gaps = 22/222 (9%)
Query: 36  GEKDVTFKVTHCGICHSDLHMIK-NEWGNTIY--PIVPGHEIVGVVTEVGSKVSKFKVGD 92
           G  +V  KV    IC +DLH+ + NEW  +    P + GHE+ G V E+G  V   +VGD
Sbjct: 27  GPGEVLIKVLATSICGTDLHIYEWNEWAQSRIKPPQIXGHEVAGEVVEIGPGVEGIEVGD 86
Query: 93  KVGVGCMVGSCRSCDSCAIDLENYCPKVIMTYANKYHDGTITYGGYSDIMVADEHFVVRI 152
            V V   +  C  C +C     + C        N    G  T G +++  V     + + 
Sbjct: 87  YVSVETHI-VCGKCYACRRGQYHVC-------QNTKIFGVDTDGVFAEYAVVPAQNIWKN 138
Query: 153 PEGTPLDATA---PLLCAGITVYS-PLRFYGLDKPGMXXXXXXXXXXXXXXXKFAKAMGV 208
           P+  P +      PL  A  TV + P+        G                  AKA G 
Sbjct: 139 PKSIPPEYATLQEPLGNAVDTVLAGPIS-------GKSVLITGAGPLGLLGIAVAKASGA 191
Query: 209 KVTVISTSPSKKSEAIERLGADSFLVSRDQDEMQAAMGTMDG 250
              ++S     + E  +++GAD  +   ++D ++      DG
Sbjct: 192 YPVIVSEPSDFRRELAKKVGADYVINPFEEDVVKEVXDITDG 233

>pdb|2D8A|A Chain A, Crystal Structure Of Ph0655 From Pyrococcus Horikoshii Ot3 Length = 348

Iteration: 1
 Score = 51.6 bits (122), Expect = 7e-07,   Method: Compositional matrix adjust.
 Identities = 56/222 (25%), Positives = 88/222 (39%), Gaps = 22/222 (9%)
Query: 36  GEKDVTFKVTHCGICHSDLHMIK-NEWGNTIY--PIVPGHEIVGVVTEVGSKVSKFKVGD 92
           G  +V  KV    IC +DLH+ + NEW  +    P + GHE+ G V E+G  V   +VGD
Sbjct: 28  GPGEVLIKVLATSICGTDLHIYEWNEWAQSRIKPPQIXGHEVAGEVVEIGPGVEGIEVGD 87
Query: 93  KVGVGCMVGSCRSCDSCAIDLENYCPKVIMTYANKYHDGTITYGGYSDIMVADEHFVVRI 152
            V V   +  C  C +C     + C        N    G  T G +++  V     + + 
Sbjct: 88  YVSVETHI-VCGKCYACRRGQYHVC-------QNTKIFGVDTDGVFAEYAVVPAQNIWKN 139
Query: 153 PEGTPLDATA---PLLCAGITVYS-PLRFYGLDKPGMXXXXXXXXXXXXXXXKFAKAMGV 208
           P+  P +      PL  A  TV + P+        G                  AKA G 
Sbjct: 140 PKSIPPEYATLQEPLGNAVDTVLAGPIS-------GKSVLITGAGPLGLLGIAVAKASGA 192
Query: 209 KVTVISTSPSKKSEAIERLGADSFLVSRDQDEMQAAMGTMDG 250
              ++S     + E  +++GAD  +   ++D ++      DG
Sbjct: 193 YPVIVSEPSDFRRELAKKVGADYVINPFEEDVVKEVXDITDG 234

>pdb|4A2C|A Chain A, Crystal Structure Of Galactitol-1-Phosphate Dehydrogenase From Escherichia Coli Length = 346

Iteration: 1
 Score = 50.4 bits (119), Expect = 2e-06,   Method: Compositional matrix adjust.
 Identities = 36/124 (29%), Positives = 54/124 (43%), Gaps = 11/124 (8%)
Query: 37  EKDVTFKVTHCGICHSDL-HMIKNEWGNTIYPIVPGHEIVGVVTEVGSKVSKFKVGDKVG 95
           + +V  K+   G+C SDL  + KN  G   YPI  GHE  G +  VGS V     GD V 
Sbjct: 25  QDEVRVKIASSGLCGSDLPRIFKN--GAHYYPITLGHEFSGYIDAVGSGVDDLHPGDAVA 82
Query: 96  VGCMVGSCRSCDSCAIDLENYCPKVIMTYANKYHDGTITYGGYSDIMVADEHFVVRIPEG 155
              ++  C +C  C     + C K           G+   GG+++ +V     V  +P  
Sbjct: 83  CVPLL-PCFTCPECLKGFYSQCAKYDFI-------GSRRDGGFAEYIVVKRKNVFALPTD 134
Query: 156 TPLD 159
            P++
Sbjct: 135 MPIE 138

>pdb|3JYL|A Chain A, Crystal Structures Of Pseudomonas Syringae Pv. Tomato Dc3000 Quinone Oxidoreductase Length = 325

Iteration: 1
 Score = 50.4 bits (119), Expect = 2e-06,   Method: Compositional matrix adjust.
 Identities = 56/228 (24%), Positives = 86/228 (37%), Gaps = 36/228 (15%)
Query: 24  VLSPFHFSRRATGEKDVTFKVTHCGICHSDLHMIKNEWGNTIYPIVPGHEIVGVVTEVGS 83
           VL    F   A G + V  +    G+   D +     +     P   G E  GVV  VG 
Sbjct: 15  VLEYVDFEPEAPGPQAVVVRNKAIGLNFIDTYYRSGLYPAPFLPSGLGAEGAGVVEAVGD 74
Query: 84  KVSKFKVGDKVGVGCMVGSCRSCDSCAIDLENYCPKVIMTYANKYHDGTITYGGYSDIMV 143
           +V++FKVGD+V  G                                  T   G YS++ V
Sbjct: 75  EVTRFKVGDRVAYG----------------------------------TGPLGAYSEVHV 100
Query: 144 ADEHFVVRIPEGTPLDATAPLLCAGITVYSPLRFYGLDKPG-MXXXXXXXXXXXXXXXKF 202
             E  +V++ +    +  A L+  G+TV   LR     KPG +               ++
Sbjct: 101 LPEANLVKLADSVSFEQAAALMLKGLTVQYLLRQTYQVKPGEIILFHAAAGGVGSLACQW 160
Query: 203 AKAMGVKVTVISTSPSKKSEAIERLGADSFLVSRDQDEMQAAMGTMDG 250
           AKA+G K+    +SP K + A + LGA   +    +D  +  +   DG
Sbjct: 161 AKALGAKLIGTVSSPEKAAHA-KALGAWETIDYSHEDVAKRVLELTDG 207

>pdb|2FZW|A Chain A, Structure Of The Binary Complex Of The E67l Mutant Of Human Glutathione-Dependent Formaldehyde Dehydrogenase With Nad(H) Length = 373

Iteration: 1
 Score = 49.7 bits (117), Expect = 2e-06,   Method: Compositional matrix adjust.
 Identities = 41/148 (27%), Positives = 61/148 (41%), Gaps = 15/148 (10%)
Query: 39  DVTFKVTHCGICHSDLHMIKNEWGNTIYPIVPGHEIVGVVTEVGSKVSKFKVGDKVGVGC 98
           +V  K+    +CH+D + +        +P++ GH   G+V  VG  V+K K GD V +  
Sbjct: 33  EVRIKIIATAVCHTDAYTLSGADPEGCFPVILGHLGAGIVESVGEGVTKLKAGDTV-IPL 91
Query: 99  MVGSCRSCDSCAIDLENYCPKVIMTYANKYH-DGT----------ITYGG---YSDIMVA 144
            +  C  C  C     N C K+ +T       DGT          + Y G   +S+  V 
Sbjct: 92  YIPQCGECKFCLNPKTNLCQKIRVTQGKGLMPDGTSRFTCKGKTILHYMGTSTFSEYTVV 151
Query: 145 DEHFVVRIPEGTPLDATAPLLCAGITVY 172
            +  V +I    PLD    L C   T Y
Sbjct: 152 ADISVAKIDPLAPLDKVCLLGCGISTGY 179

>pdb|3FPL|A Chain A, Chimera Of Alcohol Dehydrogenase By Exchange Of The Cofactor Binding Domain Res 153-295 Of C. Beijerinckii Adh By T. Brockii Adh Length = 351

Iteration: 1
 Score = 48.9 bits (115), Expect = 4e-06,   Method: Compositional matrix adjust.
 Identities = 41/149 (27%), Positives = 64/149 (42%), Gaps = 16/149 (10%)
Query: 12  NAFGWAAKDTSGVLSPFHFSRRATGEKDVTFKVTHCGICHSDLHMIKNEWGNTIYPIVPG 71
           N  GW  K+           R   G  D   +      C SD+H +          ++ G
Sbjct: 10  NKLGWIEKE-----------RPVAGSYDAIVRPLAVSPCTSDIHTVFEGALGDRKNMILG 58
Query: 72  HEIVGVVTEVGSKVSKFKVGDKVGVGCMVGSCRSCDSCAIDLENYCPKVIMTYA-NKYHD 130
           HE VG V EVGS+V  FK GD+V V C     RS +  A   + +   ++  +  + + D
Sbjct: 59  HEAVGEVVEVGSEVKDFKPGDRVIVPCTTPDWRSLEVQA-GFQQHSNGMLAGWKFSNFKD 117
Query: 131 GTITYGGYSDIMVADEHFVVRIPEGTPLD 159
           G   +G Y  +  AD +  + +P+  PL+
Sbjct: 118 G--VFGEYFHVNDADMNLAI-LPKDMPLE 143

>pdb|3UOG|A Chain A, Crystal Structure Of Putative Alcohol Dehydrogenase From Sinorhizobium Meliloti 1021 Length = 363

Iteration: 1
 Score = 48.9 bits (115), Expect = 5e-06,   Method: Compositional matrix adjust.
 Identities = 53/208 (25%), Positives = 85/208 (40%), Gaps = 13/208 (6%)
Query: 36  GEKDVTFKVTHCGICHSDLHMIKNEWG-NTIYPIVPGHEIVGVVTEVGSKVSKFKVGDKV 94
           GE D+  +     + + D  +++   G +  +P VP  +  GVV  VG  V++F+ GD+V
Sbjct: 52  GEHDIIVRTLAVSLNYRDKLVLETGXGLDLAFPFVPASDXSGVVEAVGKSVTRFRPGDRV 111
Query: 95  GVGCMVGSCRSCDSCAIDLENYCPKVIMTYANKYHDGTITYGGYSDIMVADEHFVVRIPE 154
                 G           L+   P    T A +   G    G  S+ +V  E + V  P+
Sbjct: 112 ISTFAPGW----------LDGLRPGTGRTPAYETLGGAHP-GVLSEYVVLPEGWFVAAPK 160
Query: 155 GTPLDATAPLLCAGITVYSPLRFYGLDKPGMXXXXXXXXXXXXXXXKFAKAMGVKVTVIS 214
                  + L CAG+T +  L   G  + G                + AKA G +V V S
Sbjct: 161 SLDAAEASTLPCAGLTAWFALVEKGHLRAGDRVVVQGTGGVALFGLQIAKATGAEVIVTS 220
Query: 215 TSPSKKSEAIERLGADSFLVSRDQDEMQ 242
           +S  K   A   LGAD  +   ++D ++
Sbjct: 221 SSREKLDRAFA-LGADHGINRLEEDWVE 247

>pdb|1KOL|A Chain A, Crystal Structure Of Formaldehyde Dehydrogenase Length = 398

Iteration: 1
 Score = 48.5 bits (114), Expect = 6e-06,   Method: Compositional matrix adjust.
 Identities = 29/72 (40%), Positives = 35/72 (48%), Gaps = 3/72 (4%)
Query: 37  EKDVTFKVTHCGICHSDLHMIKNEWGNTIYPIVPGHEIVGVVTEVGSKVSKFKVGDKVGV 96
           E  V  KV    IC SD HM++      +  +V GHEI G V E G  V   ++GD V V
Sbjct: 33  EHGVILKVVSTNICGSDQHMVRGRTTAQV-GLVLGHEITGEVIEKGRDVENLQIGDLVSV 91
Query: 97  --GCMVGSCRSC 106
                 G CRSC
Sbjct: 92  PFNVACGRCRSC 103

>pdb|1PED|A Chain A, Bacterial Secondary Alcohol Dehydrogenase (Apo-Form) Length = 351

Iteration: 1
 Score = 48.5 bits (114), Expect = 6e-06,   Method: Compositional matrix adjust.
 Identities = 41/149 (27%), Positives = 64/149 (42%), Gaps = 16/149 (10%)
Query: 12  NAFGWAAKDTSGVLSPFHFSRRATGEKDVTFKVTHCGICHSDLHMIKNEWGNTIYPIVPG 71
           N  GW  K+           R   G  D   +      C SD+H +          ++ G
Sbjct: 10  NKLGWIEKE-----------RPVAGSYDAIVRPLAVSPCTSDIHTVFEGALGDRKNMILG 58
Query: 72  HEIVGVVTEVGSKVSKFKVGDKVGVGCMVGSCRSCDSCAIDLENYCPKVIMTYA-NKYHD 130
           HE VG V EVGS+V  FK GD+V V C     RS +  A   + +   ++  +  + + D
Sbjct: 59  HEAVGEVVEVGSEVKDFKPGDRVIVPCTTPDWRSLEVQA-GFQQHSNGMLAGWKFSNFKD 117
Query: 131 GTITYGGYSDIMVADEHFVVRIPEGTPLD 159
           G   +G Y  +  AD +  + +P+  PL+
Sbjct: 118 G--VFGEYFHVNDADMNLAI-LPKDMPLE 143

>pdb|1JQB|A Chain A, Alcohol Dehydrogenase From Clostridium Beijerinckii: Crystal Structure Of Mutant With Enhanced Thermal Stability Length = 351

Iteration: 1
 Score = 48.5 bits (114), Expect = 6e-06,   Method: Compositional matrix adjust.
 Identities = 41/149 (27%), Positives = 64/149 (42%), Gaps = 16/149 (10%)
Query: 12  NAFGWAAKDTSGVLSPFHFSRRATGEKDVTFKVTHCGICHSDLHMIKNEWGNTIYPIVPG 71
           N  GW  K+           R   G  D   +      C SD+H +          ++ G
Sbjct: 10  NKLGWIEKE-----------RPVAGSYDAIVRPLAVSPCTSDIHTVFEGALGDRKNMILG 58
Query: 72  HEIVGVVTEVGSKVSKFKVGDKVGVGCMVGSCRSCDSCAIDLENYCPKVIMTYA-NKYHD 130
           HE VG V EVGS+V  FK GD+V V C     RS +  A   + +   ++  +  + + D
Sbjct: 59  HEAVGEVVEVGSEVKDFKPGDRVIVPCTTPDWRSLEVQA-GFQQHSNGMLAGWKFSNFKD 117
Query: 131 GTITYGGYSDIMVADEHFVVRIPEGTPLD 159
           G   +G Y  +  AD +  + +P+  PL+
Sbjct: 118 G--VFGEYFHVNDADMNLAI-LPKDMPLE 143

>pdb|2B83|A Chain A, A Single Amino Acid Substitution In The Clostridium Beijerinckii Alcohol Dehydrogenase Is Critical For Thermostabilization Length = 351

Iteration: 1
 Score = 47.4 bits (111), Expect = 1e-05,   Method: Compositional matrix adjust.
 Identities = 41/148 (27%), Positives = 62/148 (41%), Gaps = 14/148 (9%)
Query: 12  NAFGWAAKDTSGVLSPFHFSRRATGEKDVTFKVTHCGICHSDLHMIKNEWGNTIYPIVPG 71
           N  GW  K+           R   G  D   +      C SD+H +          ++ G
Sbjct: 10  NKLGWIEKE-----------RPVAGSYDAIVRPLAVSPCTSDIHTVFEGALGDRKNMILG 58
Query: 72  HEIVGVVTEVGSKVSKFKVGDKVGVGCMVGSCRSCDSCAIDLENYCPKVIMTYANKYHDG 131
           HE VG V EVGS+V  FK GD+V V C     RS +  A   ++    +     + + DG
Sbjct: 59  HEAVGEVVEVGSEVKDFKPGDRVIVPCTTPDWRSLEVQAGFPQHSNGMLAGWKFSNFKDG 118
Query: 132 TITYGGYSDIMVADEHFVVRIPEGTPLD 159
              +G Y  +  AD +  + +P+  PL+
Sbjct: 119 --VFGEYFHVNDADMNLAI-LPKDMPLE 143

>pdb|3IP1|A Chain A, Structure Of Putative Alcohol Dehydrogenase (Tm_042) From Thermotoga Maritima Length = 404

Iteration: 1
 Score = 47.4 bits (111), Expect = 1e-05,   Method: Compositional matrix adjust.
 Identities = 28/91 (30%), Positives = 41/91 (45%), Gaps = 12/91 (13%)
Query: 39  DVTFKVTHCGICHSDLHMIKNEW-------GNTIYPIVPGHEIVGVVTEVGSKVSKFKVG 91
           ++  KV  CGIC SD+H  + +        G T +P+  GHE  GVV E G +    +  
Sbjct: 57  EIIIKVKACGICGSDVHXAQTDEEGYILYPGLTGFPVTLGHEFSGVVVEAGPEAINRRTN 116
Query: 92  DKVGVGCMVGS-----CRSCDSCAIDLENYC 117
            +  +G  V +     C  C  CA    N+C
Sbjct: 117 KRFEIGEPVCAEEXLWCGHCRPCAEGFPNHC 147

>pdb|1PL7|A Chain A, Human Sorbitol Dehydrogenase (Apo) Length = 356

Iteration: 1
 Score = 47.4 bits (111), Expect = 1e-05,   Method: Compositional matrix adjust.
 Identities = 63/254 (24%), Positives = 103/254 (40%), Gaps = 21/254 (8%)
Query: 36  GEKDVTFKVTHCGICHSDLHMIK-NEWGNTIY--PIVPGHEIVGVVTEVGSKVSKFKVGD 92
           G  +V  ++   GIC SD+H  +    GN I   P+V GHE  G V +VGS V   K GD
Sbjct: 30  GPNEVLLRMHSVGICGSDVHYWEYGRIGNFIVKKPMVLGHEASGTVEKVGSSVKHLKPGD 89
Query: 93  KVGVGCMVGSCRSCDS-CAIDLENYCPKVIMTYANKYHDGTITYGGYSDIMVADEHFVVR 151
           +V +    G+ R  D  C +   N  P +    A    DG +           +  F  +
Sbjct: 90  RVAI--EPGAPRENDEFCKMGRYNLSPSIFFC-ATPPDDGNLC-----RFYKHNAAFCYK 141
Query: 152 IPEGTPLDATAPLLCAGITVYSPLRFYGLDKPGMXXXXXXXXXXXXXXXKFAKAMGVKVT 211
           +P+    +  A +    + +++  R  G    G                  AKAMG    
Sbjct: 142 LPDNVTFEEGALIEPLSVGIHACRR--GGVTLGHKVLVCGAGPIGMVTLLVAKAMGAAQV 199
Query: 212 VISTSPSKKSEAIERLGADSFL-VSRDQDE-----MQAAMGTMDGI-IDTVSAVHPLMPL 264
           V++   + +    + +GAD  L +S++  +     ++  +G    + I+   A   +   
Sbjct: 200 VVTDLSATRLSKAKEIGADLVLQISKESPQEIARKVEGQLGCKPEVTIECTGAEASIQAG 259
Query: 265 IGLLKSQGKLVLVG 278
           I   +S G LVLVG
Sbjct: 260 IYATRSGGTLVLVG 273

>pdb|3QE3|A Chain A, Sheep Liver Sorbitol Dehydrogenase Length = 355

Iteration: 1
 Score = 46.6 bits (109), Expect = 2e-05,   Method: Compositional matrix adjust.
 Identities = 73/265 (27%), Positives = 112/265 (42%), Gaps = 43/265 (16%)
Query: 36  GEKDVTFKVTHCGICHSDLHMIKN-EWGNTIY--PIVPGHEIVGVVTEVGSKVSKFKVGD 92
           G  +V  K+   GIC SD+H  ++   G+ +   P+V GHE  G V +VGS V   + GD
Sbjct: 29  GPNEVLLKMHSVGICGSDVHYWQHGRIGDFVVKKPMVLGHEASGTVVKVGSLVRHLQPGD 88
Query: 93  KVGVGCMVGSCRSCDS-CAIDLENYCPKVIMTYANKYHDGTITYGGYSDIMVADEHFVVR 151
           +V +    G+ R  D  C I   N  P +    A    DG +           + +F  +
Sbjct: 89  RVAI--QPGAPRQTDEFCKIGRYNLSPTIFFC-ATPPDDGNLCR-----FYKHNANFCYK 140
Query: 152 IPEGTPLDATA---PL-----LC--AGITVYSPLRFYGLDKPGMXXXXXXXXXXXXXXXK 201
           +P+    +  A   PL      C  AG+T+ + +   G    G+                
Sbjct: 141 LPDNVTFEEGALIEPLSVGIHACRRAGVTLGNKVLVCGAGPIGLVNLLA----------- 189
Query: 202 FAKAMG-VKVTVISTSPSKKSEAIERLGADSFL-VSRDQDE-----MQAAMGTMDGI-ID 253
            AKAMG  +V V   S S+ S+A E +GAD  L +S +  E     ++  +G+   + I+
Sbjct: 190 -AKAMGAAQVVVTDLSASRLSKAKE-VGADFILEISNESPEEIAKKVEGLLGSKPEVTIE 247
Query: 254 TVSAVHPLMPLIGLLKSQGKLVLVG 278
                  +   I    S G LVLVG
Sbjct: 248 CTGVETSIQAGIYATHSGGTLVLVG 272

>pdb|2DPH|A Chain A, Crystal Structure Of Formaldehyde Dismutase Length = 398

Iteration: 1
 Score = 45.4 bits (106), Expect = 5e-05,   Method: Compositional matrix adjust.
 Identities = 38/96 (39%), Positives = 45/96 (46%), Gaps = 14/96 (14%)
Query: 29  HFSRRATGEKDVTFKVTHCGICHSDLHMIKNEWGNTIYPI--VPGHEIVGVVTEVGSKVS 86
           H +R+   E  V  KV    IC SD H+ +   G  I P   V GHEI G V E GS V 
Sbjct: 26  HNNRKL--EHAVILKVVSTNICGSDQHIYR---GRFIVPKGHVLGHEITGEVVEKGSDVE 80
Query: 87  KFKVGDKVGVGCMV--GSCRSC-----DSCAIDLEN 115
              +GD V V   V  G CR+C     D C  +L N
Sbjct: 81  LMDIGDLVSVPFNVACGRCRNCKEARSDVCENNLVN 116

>pdb|3M6I|A Chain A, L-Arabinitol 4-Dehydrogenase Length = 363

Iteration: 1
 Score = 45.1 bits (105), Expect = 7e-05,   Method: Compositional matrix adjust.
 Identities = 33/90 (36%), Positives = 42/90 (46%), Gaps = 10/90 (11%)
Query: 37  EKDVTFKVTHCGICHSDLHMIKNEWGNTIYPI------VPGHEIVGVVTEVGSKVSKFKV 90
           E +VT  V   GIC SD+H  K+     I P+      V GHE  G V  V   V   KV
Sbjct: 40  EGEVTVAVRSTGICGSDVHFWKH---GCIGPMIVECDHVLGHESAGEVIAVHPSVKSIKV 96
Query: 91  GDKVGVGCMVGSCRSCDSCAIDLENYCPKV 120
           GD+V +   V  C +C+ C     N C +V
Sbjct: 97  GDRVAIEPQV-ICNACEPCLTGRYNGCERV 125

>pdb|1PL6|A Chain A, Human SdhNADHINHIBITOR COMPLEX Length = 356

Iteration: 1
 Score = 42.7 bits (99), Expect = 3e-04,   Method: Compositional matrix adjust.
 Identities = 63/254 (24%), Positives = 100/254 (39%), Gaps = 21/254 (8%)
Query: 36  GEKDVTFKVTHCGICHSDLHMIK-NEWGNTIY--PIVPGHEIVGVVTEVGSKVSKFKVGD 92
           G  +V  +    GIC SD+H  +    GN I   P V GHE  G V +VGS V   K GD
Sbjct: 30  GPNEVLLRXHSVGICGSDVHYWEYGRIGNFIVKKPXVLGHEASGTVEKVGSSVKHLKPGD 89
Query: 93  KVGVGCMVGSCRSCDS-CAIDLENYCPKVIMTYANKYHDGTITYGGYSDIMVADEHFVVR 151
           +V +    G+ R  D  C     N  P +    A    DG +           +  F  +
Sbjct: 90  RVAI--EPGAPRENDEFCKXGRYNLSPSIFFC-ATPPDDGNLC-----RFYKHNAAFCYK 141
Query: 152 IPEGTPLDATAPLLCAGITVYSPLRFYGLDKPGMXXXXXXXXXXXXXXXKFAKAMGVKVT 211
           +P+    +  A +    + +++  R  G    G                  AKA G    
Sbjct: 142 LPDNVTFEEGALIEPLSVGIHACRR--GGVTLGHKVLVCGAGPIGXVTLLVAKAXGAAQV 199
Query: 212 VISTSPSKKSEAIERLGADSFL-VSRDQDE-----MQAAMGTMDGI-IDTVSAVHPLMPL 264
           V++   + +    + +GAD  L +S++  +     ++  +G    + I+   A   +   
Sbjct: 200 VVTDLSATRLSKAKEIGADLVLQISKESPQEIARKVEGQLGCKPEVTIECTGAEASIQAG 259
Query: 265 IGLLKSQGKLVLVG 278
           I   +S G LVLVG
Sbjct: 260 IYATRSGGTLVLVG 273

>pdb|1YB5|A Chain A, Crystal Structure Of Human Zeta-crystallin With Bound Nadp Length = 351

Iteration: 1
 Score = 42.4 bits (98), Expect = 4e-04,   Method: Compositional matrix adjust.
 Identities = 72/321 (22%), Positives = 132/321 (41%), Gaps = 58/321 (18%)
Query: 37  EKDVTFKVTHCGICHSDLHMIKNEWGNT-IYPIVPGHEIVGVVTEVGSKVSKFKVGDKVG 95
           +  V  KV  CG+   + ++    +    + P  PG ++ GV+  VG   S FK GD+V 
Sbjct: 57  DHQVLIKVHACGVNPVETYIRSGTYSRKPLLPYTPGSDVAGVIEAVGDNASAFKKGDRV- 115
Query: 96  VGCMVGSCRSCDSCAIDLENYCPKVIMTYANKYHDGTITYGGYSDIMVADEHFVVRIPEG 155
                                           +   TI+ GGY++  +A +H V ++PE 
Sbjct: 116 --------------------------------FTSSTIS-GGYAEYALAADHTVYKLPEK 142
Query: 156 TPLDATAPLLCAGITVYSPLRFYGLDKPGMXXXXXXXXXXXXXXX-KFAKAMGVKVTVIS 214
                 A +     T Y  L      K G                 + A+A G+K  ++ 
Sbjct: 143 LDFKQGAAIGIPYFTAYRALIHSACVKAGESVLVHGASGGVGLAACQIARAYGLK--ILG 200
Query: 215 TSPSKKSEAIE-RLGADSFLVSRDQ---DEMQAAMGT--MDGIIDTVSAVHPLMPLIGLL 268
           T+ +++ + I  + GA      R+    D+++  +G   +D II+ ++ V+ L   + LL
Sbjct: 201 TAGTEEGQKIVLQNGAHEVFNHREVNYIDKIKKYVGEKGIDIIIEMLANVN-LSKDLSLL 259
Query: 269 KSQGKLVLVGAPEKPLELPAFSLLMGRKIVGGSMIGGMKETQEMIDFAAKHNIRADIE-- 326
              G++++VG+       P  ++     I+G ++    KE  E   +AA   ++A +E  
Sbjct: 260 SHGGRVIVVGSRGTIEINPRDTMAKESSIIGVTLFSSTKE--EFQQYAAA--LQAGMEIG 315
Query: 327 ----VIPADYVNTALERLAKA 343
               VI + Y    LE++A+A
Sbjct: 316 WLKPVIGSQY---PLEKVAEA 333

Structure Templates Detected by RPS-BLAST

Original result of RPS-BLAST against PDB70 database

ID	Length	Definition	E-value
Query	361
1yqd_A	366	Sinapyl alcohol dehydrogenase; lignin, monolignol,	0.0
2cf5_A	357	Atccad5, CAD, cinnamyl alcohol dehydrogenase; lign	0.0
1uuf_A	369	YAHK, zinc-type alcohol dehydrogenase-like protein	0.0
1piw_A	360	Hypothetical zinc-type alcohol dehydrogenase- like	0.0
3two_A	348	Mannitol dehydrogenase; cinnamyl-alcohol dehydroge	0.0
1rjw_A	339	ADH-HT, alcohol dehydrogenase; oxidoreductase, NAD	1e-170
2hcy_A	347	Alcohol dehydrogenase 1; tetramer of asymmetric di	1e-169
3s2e_A	340	Zinc-containing alcohol dehydrogenase superfamily;	1e-168
2h6e_A	344	ADH-4, D-arabinose 1-dehydrogenase; rossman fold,	9e-85
1h2b_A	359	Alcohol dehydrogenase; oxidoreductase, archaea, hy	3e-84
1jvb_A	347	NAD(H)-dependent alcohol dehydrogenase; archaeon,	2e-81
3jv7_A	345	ADH-A; dehydrogenase, nucleotide binding, rossmann	5e-79
1vj0_A	380	Alcohol dehydrogenase, zinc-containing; TM0436, st	9e-49
2d8a_A	348	PH0655, probable L-threonine 3-dehydrogenase; pyro	3e-43
4ej6_A	370	Putative zinc-binding dehydrogenase; structural ge	4e-43
2cdc_A	366	Glucose dehydrogenase glucose 1-dehydrogenase, DHG	1e-42
2eih_A	343	Alcohol dehydrogenase; zinc ION binding protein, s	9e-42
4a2c_A	346	Galactitol-1-phosphate 5-dehydrogenase; oxidoreduc	3e-41
2dq4_A	343	L-threonine 3-dehydrogenase; NAD-dependent, oxidor	7e-39
1e3i_A	376	Alcohol dehydrogenase, class II; HET: NAD; 2.08A {	1e-38
3uog_A	363	Alcohol dehydrogenase; structural genomics, protei	4e-38
2fzw_A	373	Alcohol dehydrogenase class III CHI chain; S-nitro	7e-38
1cdo_A	374	Alcohol dehydrogenase; oxidoreductase, oxidoreduct	7e-38
1f8f_A	371	Benzyl alcohol dehydrogenase; rossmann fold, oxido	3e-37
2jhf_A	374	Alcohol dehydrogenase E chain; oxidoreductase, met	7e-37
1e3j_A	352	NADP(H)-dependent ketose reductase; oxidoreductase	8e-37
3ip1_A	404	Alcohol dehydrogenase, zinc-containing; structural	8e-37
1p0f_A	373	NADP-dependent alcohol dehydrogenase; ADH topology	7e-36
4a0s_A	447	Octenoyl-COA reductase/carboxylase; oxidoreductase	8e-36
1pl8_A	356	Human sorbitol dehydrogenase; NAD, oxidoreductase;	4e-35
2b5w_A	357	Glucose dehydrogenase; nucleotide binding motif, o	3e-34
3krt_A	456	Crotonyl COA reductase; structural genomics, prote	7e-34
3m6i_A	363	L-arabinitol 4-dehydrogenase; medium chain dehydro	1e-30
3goh_A	315	Alcohol dehydrogenase, zinc-containing; NP_718042.	5e-30
3tqh_A	321	Quinone oxidoreductase; HET: NDP; 2.44A {Coxiella	2e-27
1zsy_A	357	Mitochondrial 2-enoyl thioester reductase; medium-	8e-27
3fpc_A	352	NADP-dependent alcohol dehydrogenase; oxydoreducta	3e-25
3fbg_A	346	Putative arginate lyase; structural genomics, unkn	3e-24
3gaz_A	343	Alcohol dehydrogenase superfamily protein; oxidore	4e-24
2vn8_A	375	Reticulon-4-interacting protein 1; mitochondrion,	1e-23
3pi7_A	349	NADH oxidoreductase; groes-like fold, NAD(P)-bindi	2e-23
3gqv_A	371	Enoyl reductase; medium-chain reductase (MDR super	1e-22
1yb5_A	351	Quinone oxidoreductase; medium-chain dehydrogenase	8e-22
3gms_A	340	Putative NADPH:quinone reductase; structural genom	9e-22
1gu7_A	364	Enoyl-[acyl-carrier-protein] reductase [NADPH, B-s	2e-21
4a27_A	349	Synaptic vesicle membrane protein VAT-1 homolog-L;	4e-21
4dvj_A	363	Putative zinc-dependent alcohol dehydrogenase Pro;	4e-21
1kol_A	398	Formaldehyde dehydrogenase; oxidoreductase; HET: N	1e-20
2dph_A	398	Formaldehyde dismutase; dismutation of aldehydes,	4e-20
4dup_A	353	Quinone oxidoreductase; PSI-biology, structural ge	5e-20
4eye_A	342	Probable oxidoreductase; structural genomics, niai	2e-19
1iz0_A	302	Quinone oxidoreductase; APO-enzyme, riken structur	3e-18
1qor_A	327	Quinone oxidoreductase; HET: NAP; 2.20A {Escherich	2e-17
3jyn_A	325	Quinone oxidoreductase; rossmann fold, protein-NAD	4e-17
1wly_A	333	CAAR, 2-haloacrylate reductase; NADPH-dependent ox	5e-17
2j8z_A	354	Quinone oxidoreductase; medium-chain dehydrogenase	4e-16
2c0c_A	362	Zinc binding alcohol dehydrogenase, domain contain	8e-16
3iup_A	379	Putative NADPH:quinone oxidoreductase; YP_296108.1	3e-15
3slk_A	795	Polyketide synthase extender module 2; rossmann fo	5e-14
3qwb_A	334	Probable quinone oxidoreductase; rossmann fold, qu	9e-14
3nx4_A	324	Putative oxidoreductase; csgid, structural genomic	2e-11
1tt7_A	330	YHFP; alcohol dehydrogenase, Zn-dependent, NAD, st	4e-11
1xa0_A	328	Putative NADPH dependent oxidoreductases; structur	4e-10
2vz8_A	2512	Fatty acid synthase; transferase, phosphopantethei	6e-08
3d4o_A	293	Dipicolinate synthase subunit A; NP_243269.1, stru	3e-07
1vt4_I	1221	APAF-1 related killer DARK; drosophila apoptosome,	8e-07
1pqw_A	198	Polyketide synthase; rossmann fold, dimer, structu	4e-06
3hg7_A	324	D-isomer specific 2-hydroxyacid dehydrogenase FAM	2e-04
1leh_A	364	Leucine dehydrogenase; oxidoreductase; 2.20A {Lysi	2e-04
3pp8_A	315	Glyoxylate/hydroxypyruvate reductase A; structural	2e-04
3e8x_A	236	Putative NAD-dependent epimerase/dehydratase; stru	3e-04
2dbq_A	334	Glyoxylate reductase; D-3-phosphoglycerate dehydro	4e-04
3evt_A	324	Phosphoglycerate dehydrogenase; structural genomic	4e-04
1xea_A	323	Oxidoreductase, GFO/IDH/MOCA family; structural ge	4e-04
2rir_A	300	Dipicolinate synthase, A chain; structural genomic	6e-04

>1yqd_A Sinapyl alcohol dehydrogenase; lignin, monolignol, oxidoreductase, zinc-dependent, plant DE biosynthesis, substrate inhibition; HET: NAP; 1.65A {Populus tremuloides} PDB: 1yqx_A* Length = 366

 Score =  673 bits (1738), Expect = 0.0
 Identities = 277/361 (76%), Positives = 319/361 (88%)

Query: 1   MGQAPEQEHPKNAFGWAAKDTSGVLSPFHFSRRATGEKDVTFKVTHCGICHSDLHMIKNE 60
           M ++PE+EHP  AFGWAA+D SG LSPF+FSRRATGE+DV FKV +CG+CHSDLH IKN+
Sbjct: 5   MSKSPEEEHPVKAFGWAARDQSGHLSPFNFSRRATGEEDVRFKVLYCGVCHSDLHSIKND 64

Query: 61  WGNTIYPIVPGHEIVGVVTEVGSKVSKFKVGDKVGVGCMVGSCRSCDSCAIDLENYCPKV 120
           WG ++YP+VPGHEIVG VTEVGSKV K  VGDKVGVGC+VG+C SC+SCA DLENYCPK+
Sbjct: 65  WGFSMYPLVPGHEIVGEVTEVGSKVKKVNVGDKVGVGCLVGACHSCESCANDLENYCPKM 124

Query: 121 IMTYANKYHDGTITYGGYSDIMVADEHFVVRIPEGTPLDATAPLLCAGITVYSPLRFYGL 180
           I+TYA+ YHDGTITYGGYS+ MVA+E +++R P+  PLD  APLLCAGITVYSPL+++GL
Sbjct: 125 ILTYASIYHDGTITYGGYSNHMVANERYIIRFPDNMPLDGGAPLLCAGITVYSPLKYFGL 184

Query: 181 DKPGMHVGVVGLGGLGHVAVKFAKAMGVKVTVISTSPSKKSEAIERLGADSFLVSRDQDE 240
           D+PG H+G+VGLGGLGHVAVKFAKA G KVTVISTSPSKK EA++  GADSFLVSRDQ++
Sbjct: 185 DEPGKHIGIVGLGGLGHVAVKFAKAFGSKVTVISTSPSKKEEALKNFGADSFLVSRDQEQ 244

Query: 241 MQAAMGTMDGIIDTVSAVHPLMPLIGLLKSQGKLVLVGAPEKPLELPAFSLLMGRKIVGG 300
           MQAA GT+DGIIDTVSAVHPL+PL GLLKS GKL+LVGAPEKPLELPAFSL+ GRKIV G
Sbjct: 245 MQAAAGTLDGIIDTVSAVHPLLPLFGLLKSHGKLILVGAPEKPLELPAFSLIAGRKIVAG 304

Query: 301 SMIGGMKETQEMIDFAAKHNIRADIEVIPADYVNTALERLAKADVRYRFVIDVANTMKST 360
           S IGGMKETQEMIDFAAKHNI ADIEVI  DY+NTA+ERLAK DVRYRFVIDV NT+ +T
Sbjct: 305 SGIGGMKETQEMIDFAAKHNITADIEVISTDYLNTAMERLAKNDVRYRFVIDVGNTLAAT 364

Query: 361 P 361
            
Sbjct: 365 K 365

>2cf5_A Atccad5, CAD, cinnamyl alcohol dehydrogenase; lignin biosynthesis, metal-binding, NADP, oxidoreductase, zinc; 2.0A {Arabidopsis thaliana} PDB: 2cf6_A* Length = 357

 Score =  650 bits (1679), Expect = 0.0
 Identities = 182/352 (51%), Positives = 242/352 (68%)

Query: 8   EHPKNAFGWAAKDTSGVLSPFHFSRRATGEKDVTFKVTHCGICHSDLHMIKNEWGNTIYP 67
           E  +   GWAA+D SG+LSP+ ++ R TG +DV  ++  CGICH+DLH  KN+ G + YP
Sbjct: 5   EAERKTTGWAARDPSGILSPYTYTLRETGPEDVNIRIICCGICHTDLHQTKNDLGMSNYP 64

Query: 68  IVPGHEIVGVVTEVGSKVSKFKVGDKVGVGCMVGSCRSCDSCAIDLENYCPKVIMTYANK 127
           +VPGHE+VG V EVGS VSKF VGD VGVGC+VG C  C  C  DLE YCPK I +Y + 
Sbjct: 65  MVPGHEVVGEVVEVGSDVSKFTVGDIVGVGCLVGCCGGCSPCERDLEQYCPKKIWSYNDV 124

Query: 128 YHDGTITYGGYSDIMVADEHFVVRIPEGTPLDATAPLLCAGITVYSPLRFYGLDKPGMHV 187
           Y +G  T GG++   V  + FVV+IPEG  ++  APLLCAG+TVYSPL  +GL +PG+  
Sbjct: 125 YINGQPTQGGFAKATVVHQKFVVKIPEGMAVEQAAPLLCAGVTVYSPLSHFGLKQPGLRG 184

Query: 188 GVVGLGGLGHVAVKFAKAMGVKVTVISTSPSKKSEAIERLGADSFLVSRDQDEMQAAMGT 247
           G++GLGG+GH+ VK AKAMG  VTVIS+S  K+ EA++ LGAD +++  DQ +M     +
Sbjct: 185 GILGLGGVGHMGVKIAKAMGHHVTVISSSNKKREEALQDLGADDYVIGSDQAKMSELADS 244

Query: 248 MDGIIDTVSAVHPLMPLIGLLKSQGKLVLVGAPEKPLELPAFSLLMGRKIVGGSMIGGMK 307
           +D +IDTV   H L P + LLK  GKL+L+G    PL+     L++GRK++ GS IG MK
Sbjct: 245 LDYVIDTVPVHHALEPYLSLLKLDGKLILMGVINNPLQFLTPLLMLGRKVITGSFIGSMK 304

Query: 308 ETQEMIDFAAKHNIRADIEVIPADYVNTALERLAKADVRYRFVIDVANTMKS 359
           ET+EM++F  +  + + IEV+  DYVNTA ERL K DVRYRFV+DV  +   
Sbjct: 305 ETEEMLEFCKEKGLSSIIEVVKMDYVNTAFERLEKNDVRYRFVVDVEGSNLD 356

>1uuf_A YAHK, zinc-type alcohol dehydrogenase-like protein YAHK; oxidoreductase, zinc binding, oxydoreductase, metal-binding; 1.76A {Escherichia coli} SCOP: b.35.1.2 c.2.1.1 Length = 369

 Score =  626 bits (1616), Expect = 0.0
 Identities = 170/359 (47%), Positives = 222/359 (61%), Gaps = 6/359 (1%)

Query: 3   QAPEQEHPKNAFGWAAKDTSGVLSPFHFSRRATGEKDVTFKVTHCGICHSDLHMIKNEWG 62
            +  ++         A      L P   +RR  G  DV  ++ +CG+CHSDLH +++EW 
Sbjct: 13  TSLYKKAGLKIKAVGAYSAKQPLEPMDITRREPGPNDVKIEIAYCGVCHSDLHQVRSEWA 72

Query: 63  NTIYPIVPGHEIVGVVTEVGSKVSKFKVGDKVGVGCMVGSCRSCDSCAIDLENYCPKVIM 122
            T+YP VPGHEIVG V  VG +V K+  GD VGVGC+V SC+ C+ C   LENYC  +  
Sbjct: 73  GTVYPCVPGHEIVGRVVAVGDQVEKYAPGDLVGVGCIVDSCKHCEECEDGLENYCDHMTG 132

Query: 123 TYANKYHDGT-ITYGGYSDIMVADEHFVVRIPEG-TPLDATAPLLCAGITVYSPLRFYGL 180
           TY +   D    T GGYS  +V  E +V+RI      L A APLLCAGIT YSPLR +  
Sbjct: 133 TYNSPTPDEPGHTLGGYSQQIVVHERYVLRIRHPQEQLAAVAPLLCAGITTYSPLRHWQA 192

Query: 181 DKPGMHVGVVGLGGLGHVAVKFAKAMGVKVTVISTSPSKKSEAIERLGADSFLVSRDQDE 240
             PG  VGVVG+GGLGH+ +K A AMG  V   +TS +K+  A + LGAD  + SR+ DE
Sbjct: 193 -GPGKKVGVVGIGGLGHMGIKLAHAMGAHVVAFTTSEAKREAA-KALGADEVVNSRNADE 250

Query: 241 MQAAMGTMDGIIDTVSAVHPLMPLIGLLKSQGKLVLVGAPEKPLELP-AFSLLMGRKIVG 299
           M A + + D I++TV+A H L     LLK  G + LVGAP  P + P  F+L+M R+ + 
Sbjct: 251 MAAHLKSFDFILNTVAAPHNLDDFTTLLKRDGTMTLVGAPATPHKSPEVFNLIMKRRAIA 310

Query: 300 GSMIGGMKETQEMIDFAAKHNIRADIEVIPADYVNTALERLAKADVRYRFVIDVANTMK 358
           GSMIGG+ ETQEM+DF A+H I ADIE+I AD +N A ER+ + DV+YRFVID   T+ 
Sbjct: 311 GSMIGGIPETQEMLDFCAEHGIVADIEMIRADQINEAYERMLRGDVKYRFVIDNR-TLT 368

>1piw_A Hypothetical zinc-type alcohol dehydrogenase- like protein in PRE5-FET4 intergenic...; ADH topology, NADP(H)dependent, oxidoreductase; HET: NAP; 3.00A {Saccharomyces cerevisiae} SCOP: b.35.1.2 c.2.1.1 PDB: 1ps0_A* 1q1n_A Length = 360

 Score =  612 bits (1580), Expect = 0.0
 Identities = 126/353 (35%), Positives = 190/353 (53%), Gaps = 10/353 (2%)

Query: 8   EHPKNAFGWAAKDTSGV--LSPFHFSRRATGEKDVTFKVTHCGICHSDLHMIKNEWGNTI 65
            +P+   G A +            +  +   + D+  K+  CG+C SD+H     WGN  
Sbjct: 2   SYPEKFEGIAIQSHEDWKNPKKTKYDPKPFYDHDIDIKIEACGVCGSDIHCAAGHWGNMK 61

Query: 66  YPIVPGHEIVGVVTEVGSKV-SKFKVGDKVGVGCMVGSCRSCDSCAIDLENYCPKVIMTY 124
            P+V GHEIVG V ++G K  S  KVG +VGVG  V SC  CD C  D E YC K + TY
Sbjct: 62  MPLVVGHEIVGKVVKLGPKSNSGLKVGQRVGVGAQVFSCLECDRCKNDNEPYCTKFVTTY 121

Query: 125 ANKYHDGTITYGGYSDIMVADEHFVVRIPEGTPLDATAPLLCAGITVYSPLRFYGLDKPG 184
           +  Y DG ++ GGY++ +   EHFVV IPE  P    APLLC G+TVYSPL   G   PG
Sbjct: 122 SQPYEDGYVSQGGYANYVRVHEHFVVPIPENIPSHLAAPLLCGGLTVYSPLVRNGC-GPG 180

Query: 185 MHVGVVGLGGLGHVAVKFAKAMGVKVTVISTSPSKKSEAIERLGADSFLVSRDQ-DEMQA 243
             VG+VGLGG+G +    +KAMG +  VIS S  K+ +A+ ++GAD ++ + ++ D  + 
Sbjct: 181 KKVGIVGLGGIGSMGTLISKAMGAETYVISRSSRKREDAM-KMGADHYIATLEEGDWGEK 239

Query: 244 AMGTMDGIIDTVSAVHPL--MPLIGLLKSQGKLVLVGAPEKPLELPAFSLLMGRKIVGGS 301
              T D I+   S++  +    +   +K  G++V +  PE+   L      +    +  S
Sbjct: 240 YFDTFDLIVVCASSLTDIDFNIMPKAMKVGGRIVSISIPEQHEMLSLKPYGLKAVSISYS 299

Query: 302 MIGGMKETQEMIDFAAKHNIRADIEVIPADY--VNTALERLAKADVRYRFVID 352
            +G +KE  +++   ++ +I+  +E +P     V+ A ER+ K DVRYRF + 
Sbjct: 300 ALGSIKELNQLLKLVSEKDIKIWVETLPVGEAGVHEAFERMEKGDVRYRFTLV 352

>3two_A Mannitol dehydrogenase; cinnamyl-alcohol dehydrogenase, NADP(H) oxidoreductase; HET: NDP; 2.18A {Helicobacter pylori} Length = 348

 Score =  604 bits (1561), Expect = 0.0
 Identities = 146/353 (41%), Positives = 205/353 (58%), Gaps = 12/353 (3%)

Query: 10  PKNAFGWAAKDTSGVLSPFHFSRRATGEKDVTFKVTHCGICHSDLHMIKNEWGNTIYPIV 69
              + G+A         P  FSR A G +DV   + + GICHSD+H   +EW   IYP++
Sbjct: 2   RVQSKGFAIFSKDEHFKPHDFSRHAVGPRDVLIDILYAGICHSDIHSAYSEWKEGIYPMI 61

Query: 70  PGHEIVGVVTEVGSKVSKFKVGDKVGVGCMVGSCRSCDSCAIDLENYCPKVIMTY--ANK 127
           PGHEI G++ EVG  V KFK+GD VGVGC V SC++C  C    E +C KV+ TY   + 
Sbjct: 62  PGHEIAGIIKEVGKGVKKFKIGDVVGVGCFVNSCKACKPCKEHQEQFCTKVVFTYDCLDS 121

Query: 128 YHDGTITYGGYSDIMVADEHFVVRIPEGTPLDATAPLLCAGITVYSPLRFYGLDKPGMHV 187
           +HD     GGYS+ +V DE++V+ + +  PL+  APLLCAGIT YSPL+F  +   G  V
Sbjct: 122 FHDNEPHMGGYSNNIVVDENYVISVDKNAPLEKVAPLLCAGITTYSPLKFSKV-TKGTKV 180

Query: 188 GVVGLGGLGHVAVKFAKAMGVKVTVISTSPSKKSEAIERLGADSFLVSRDQDEMQAAMGT 247
           GV G GGLG +AVK+A AMG +V+V + +  KK +A+  +G   F     Q         
Sbjct: 181 GVAGFGGLGSMAVKYAVAMGAEVSVFARNEHKKQDAL-SMGVKHFYTDPKQ-----CKEE 234

Query: 248 MDGIIDTVSAVHPLMPLIGLLKSQGKLVLVGAPEKPLE--LPAFSLL-MGRKIVGGSMIG 304
           +D II T+   + L   + LL   G L LVG P   +   L  F  + +G + V GS+IG
Sbjct: 235 LDFIISTIPTHYDLKDYLKLLTYNGDLALVGLPPVEVAPVLSVFDFIHLGNRKVYGSLIG 294

Query: 305 GMKETQEMIDFAAKHNIRADIEVIPADYVNTALERLAKADVRYRFVIDVANTM 357
           G+KETQEM+DF+ KHNI  +I++I    ++TA   L     ++R+VID+  + 
Sbjct: 295 GIKETQEMVDFSIKHNIYPEIDLILGKDIDTAYHNLTHGKAKFRYVIDMKKSF 347

>1rjw_A ADH-HT, alcohol dehydrogenase; oxidoreductase, NAD, zinc, tetramer; 2.35A {Geobacillus stearothermophilus} SCOP: b.35.1.2 c.2.1.1 PDB: 3pii_A Length = 339

 Score =  477 bits (1231), Expect = e-170
 Identities = 107/345 (31%), Positives = 169/345 (48%), Gaps = 13/345 (3%)

Query: 15  GWAAKDTSGVLSPFHFSRRATGEKDVTFKVTHCGICHSDLHMIKNEWG-NTIYPIVPGHE 73
               +     L      +      +V  ++  CG+CH+DLH    +W      P++PGHE
Sbjct: 3   AAVVEQFKEPLKIKEVEKPTISYGEVLVRIKACGVCHTDLHAAHGDWPVKPKLPLIPGHE 62

Query: 74  IVGVVTEVGSKVSKFKVGDKVGVGCMVGSCRSCDSCAIDLENYCPKVIMTYANKYHDGTI 133
            VG+V EVG  V+  KVGD+VG+  +  +C  CD C    E  C             G  
Sbjct: 63  GVGIVEEVGPGVTHLKVGDRVGIPWLYSACGHCDYCLSGQETLCEHQKNA-------GYS 115

Query: 134 TYGGYSDIMVADEHFVVRIPEGTPLDATAPLLCAGITVYSPLRFYGLDKPGMHVGVVGLG 193
             GGY++   A   +VV+IP+    +  AP+ CAG+T Y  L+  G  KPG  V + G+G
Sbjct: 116 VDGGYAEYCRAAADYVVKIPDNLSFEEAAPIFCAGVTTYKALKVTGA-KPGEWVAIYGIG 174

Query: 194 GLGHVAVKFAKAMGVKVTVISTSPSKKSEAIERLGADSFLVSRDQD---EMQAAMGTMDG 250
           GLGHVAV++AKAMG+ V  +     K   A + LGAD  +    +D    M+  +G +  
Sbjct: 175 GLGHVAVQYAKAMGLNVVAVDIGDEKLELA-KELGADLVVNPLKEDAAKFMKEKVGGVHA 233

Query: 251 IIDTVSAVHPLMPLIGLLKSQGKLVLVGAPEKPLELPAFSLLMGRKIVGGSMIGGMKETQ 310
            + T  +          ++  G  VLVG P + + +P F  ++    + GS++G  K+ Q
Sbjct: 234 AVVTAVSKPAFQSAYNSIRRGGACVLVGLPPEEMPIPIFDTVLNGIKIIGSIVGTRKDLQ 293

Query: 311 EMIDFAAKHNIRADIEVIPADYVNTALERLAKADVRYRFVIDVAN 355
           E + FAA+  ++  IEV P + +N   +R+ K  +  R V+ + +
Sbjct: 294 EALQFAAEGKVKTIIEVQPLEKINEVFDRMLKGQINGRVVLTLED 338

>2hcy_A Alcohol dehydrogenase 1; tetramer of asymmetric dimers, zinc coordination, intramolec disulfide bonds, oxidoreductase; HET: 8ID; 2.44A {Saccharomyces cerevisiae} Length = 347

 Score =  474 bits (1222), Expect = e-169
 Identities = 100/353 (28%), Positives = 166/353 (47%), Gaps = 17/353 (4%)

Query: 10  PKNAFGWAAKDTSGVLSPFHFSRRATGEKDVTFKVTHCGICHSDLHMIKNEWGN-TIYPI 68
           P+   G    ++ G L             ++   V + G+CH+DLH    +W      P+
Sbjct: 3   PETQKGVIFYESHGKLEYKDIPVPKPKANELLINVKYSGVCHTDLHAWHGDWPLPVKLPL 62

Query: 69  VPGHEIVGVVTEVGSKVSKFKVGDKVGVGCMVGSCRSCDSCAIDLENYCPKVIMTYANKY 128
           V GHE  GVV  +G  V  +K+GD  G+  + GSC +C+ C +  E+ CP   ++     
Sbjct: 63  VGGHEGAGVVVGMGENVKGWKIGDYAGIKWLNGSCMACEYCELGNESNCPHADLS----- 117

Query: 129 HDGTITYGGYSDIMVADEHFVVRIPEGTPLDATAPLLCAGITVYSPLRFYGLDKPGMHVG 188
             G    G +     AD      IP+GT L   AP+LCAGITVY  L+   L   G  V 
Sbjct: 118 --GYTHDGSFQQYATADAVQAAHIPQGTDLAQVAPILCAGITVYKALKSANL-MAGHWVA 174

Query: 189 VVGL-GGLGHVAVKFAKAMGVKVTVISTSPSKKSEAIERLGADSFLVSRDQDE-----MQ 242
           + G  GGLG +AV++AKAMG +V  I     K+      +G + F+    + +     ++
Sbjct: 175 ISGAAGGLGSLAVQYAKAMGYRVLGIDGGEGKEELF-RSIGGEVFIDFTKEKDIVGAVLK 233

Query: 243 AAMGTMDGIIDTVSAVHPLMPLIGLLKSQGKLVLVGAPEKP-LELPAFSLLMGRKIVGGS 301
           A  G   G+I+   +   +      +++ G  VLVG P         F+ ++    + GS
Sbjct: 234 ATDGGAHGVINVSVSEAAIEASTRYVRANGTTVLVGMPAGAKCCSDVFNQVVKSISIVGS 293

Query: 302 MIGGMKETQEMIDFAAKHNIRADIEVIPADYVNTALERLAKADVRYRFVIDVA 354
            +G   +T+E +DF A+  +++ I+V+    +    E++ K  +  R+V+D +
Sbjct: 294 YVGNRADTREALDFFARGLVKSPIKVVGLSTLPEIYEKMEKGQIVGRYVVDTS 346

>3s2e_A Zinc-containing alcohol dehydrogenase superfamily; FURX, oxidoreductase; HET: NAD; 1.76A {Ralstonia eutropha} PDB: 3s1l_A* 3s2f_A* 3s2g_A* 3s2i_A* 1llu_A* 3meq_A* Length = 340

 Score =  470 bits (1212), Expect = e-168
 Identities = 113/342 (33%), Positives = 173/342 (50%), Gaps = 13/342 (3%)

Query: 17  AAKDTSGVLSPFHFSRRATGEKDVTFKVTHCGICHSDLHMIKNEWG-NTIYPIVPGHEIV 75
             +     L+         G   V  K+   G+CH+DLH    +W      P +PGHE V
Sbjct: 7   VVRAFGAPLTIDEVPVPQPGPGQVQVKIEASGVCHTDLHAADGDWPVKPTLPFIPGHEGV 66

Query: 76  GVVTEVGSKVSKFKVGDKVGVGCMVGSCRSCDSCAIDLENYCPKVIMTYANKYHDGTITY 135
           G V+ VGS VS+ K GD+VGV  +  +C  C+ C    E  C K   T       G    
Sbjct: 67  GYVSAVGSGVSRVKEGDRVGVPWLYSACGYCEHCLQGWETLCEKQQNT-------GYSVN 119

Query: 136 GGYSDIMVADEHFVVRIPEGTPLDATAPLLCAGITVYSPLRFYGLDKPGMHVGVVGLGGL 195
           GGY + +VAD ++V  +P+       AP+LCAG+TVY  L+     +PG  V + G+GGL
Sbjct: 120 GGYGEYVVADPNYVGLLPDKVGFVEIAPILCAGVTVYKGLKVTDT-RPGQWVVISGIGGL 178

Query: 196 GHVAVKFAKAMGVKVTVISTSPSKKSEAIERLGADSFLVSRDQD---EMQAAMGTMDGII 252
           GHVAV++A+AMG++V  +    +K + A  RLGA+  + +RD D    +Q  +G   G++
Sbjct: 179 GHVAVQYARAMGLRVAAVDIDDAKLNLA-RRLGAEVAVNARDTDPAAWLQKEIGGAHGVL 237

Query: 253 DTVSAVHPLMPLIGLLKSQGKLVLVGAPEKPLELPAFSLLMGRKIVGGSMIGGMKETQEM 312
            T  +       IG+++  G + L G P      P F +++    + GS++G   + QE 
Sbjct: 238 VTAVSPKAFSQAIGMVRRGGTIALNGLPPGDFGTPIFDVVLKGITIRGSIVGTRSDLQES 297

Query: 313 IDFAAKHNIRADIEVIPADYVNTALERLAKADVRYRFVIDVA 354
           +DFAA  +++A +     D VN    RL +  V  R V+D +
Sbjct: 298 LDFAAHGDVKATVSTAKLDDVNDVFGRLREGKVEGRVVLDFS 339

>2h6e_A ADH-4, D-arabinose 1-dehydrogenase; rossman fold, medium chain alcohol dehydrogenase, oxidoreduc; 1.80A {Sulfolobus solfataricus} Length = 344

 Score =  259 bits (664), Expect = 9e-85
 Identities = 86/325 (26%), Positives = 133/325 (40%), Gaps = 18/325 (5%)

Query: 36  GEKDVTFKVTHCGICHSDLHMIKNEWGN--TIYPIVPGHEIVGVVTEVGSKVSKFKVGDK 93
             ++V  ++   G+C +DL + K          PI+ GHE  G + EVG  ++K K GD 
Sbjct: 27  QGEEVLIRIGGAGVCRTDLRVWKGVEAKQGFRLPIILGHENAGTIVEVGE-LAKVKKGDN 85

Query: 94  VGVGCMVGSCRSCDSCAIDLENYCPKVIMTYANKYHDGTITYGGYSDIMVADEHFVVRIP 153
           V V        +C  C     N C   I+        G  T GG+S+ M+      +   
Sbjct: 86  VVVY-ATWGDLTCRYCREGKFNICKNQIIP-------GQTTNGGFSEYMLVKSSRWLVKL 137

Query: 154 EGTPLDATAPLLCAGITVYSPLR---FYGLDKPGMHVGVVGLGGLGHVAVKFAKAMGVKV 210
                   APL  AG T    +R    +        V V G+GGL    ++  KA+   +
Sbjct: 138 NSLSPVEAAPLADAGTTSMGAIRQALPFISKFAEPVVIVNGIGGLAVYTIQILKALMKNI 197

Query: 211 TVISTSPSK-KSEAIERLGADSFLVSRDQDE--MQAAMGTM-DGIIDTVSAVHPLMPLIG 266
           T++  S SK   +    LGAD     +D +    +   G      ID V        L  
Sbjct: 198 TIVGISRSKKHRDFALELGADYVSEMKDAESLINKLTDGLGASIAIDLVGTEETTYNLGK 257

Query: 267 LLKSQGKLVLVGAPEKPLELPAFSLLMGRKIVGGSMIGGMKETQEMIDFAAKHNIRADIE 326
           LL  +G ++LVG   K + L AF   +  K + GS  G + + ++++  +    I+  I 
Sbjct: 258 LLAQEGAIILVGMEGKRVSLEAFDTAVWNKKLLGSNYGSLNDLEDVVRLSESGKIKPYII 317

Query: 327 VIPADYVNTALERLAKADVRYRFVI 351
            +P D +N A   L +  V  R VI
Sbjct: 318 KVPLDDINKAFTNLDEGRVDGRQVI 342

>1h2b_A Alcohol dehydrogenase; oxidoreductase, archaea, hyperthermophIle, zinc; HET: OCA NAJ; 1.62A {Aeropyrum pernix} SCOP: b.35.1.2 c.2.1.1 Length = 359

 Score =  258 bits (662), Expect = 3e-84
 Identities = 90/331 (27%), Positives = 151/331 (45%), Gaps = 22/331 (6%)

Query: 33  RATGEKDVTFKVTHCGICHSDLHMIKNEWGNTIY---PIVPGHEIVGVVTEVGSKVSKFK 89
           R  G  DV  ++   G+CH+DLH+++  W   +    P   GHE VG + EV   V   +
Sbjct: 37  RLEGRFDVIVRIAGAGVCHTDLHLVQGMWHELLQPKLPYTLGHENVGYIEEVAEGVEGLE 96

Query: 90  VGDKVGVGCMVGSCRSCDSCAIDLENYCPKVIMTYANKYHDGTITYGGYSDIMVADEHFV 149
            GD V +     +  +C +C    + +C  +          G    GG+++ M      V
Sbjct: 97  KGDPVIL-HPAVTDGTCLACRAGEDMHCENLEFP-------GLNIDGGFAEFMRTSHRSV 148

Query: 150 VRIPEGTPLDAT---APLLCAGITVYSPLRFYGLD-KPGMHVGVVGLGGLGHVAVKFAKA 205
           +++P+    +     APL  AGIT Y  ++       PG +V +VG+GGLGH+AV+  K 
Sbjct: 149 IKLPKDISREKLVEMAPLADAGITAYRAVKKAARTLYPGAYVAIVGVGGLGHIAVQLLKV 208

Query: 206 MG-VKVTVISTSPSKKSEAIERLGADSFLVSRDQD--EMQAAMGTM--DGIIDTVSAVHP 260
           M    V  +     K  +  ERLGAD  + +R     ++         +  +D V +   
Sbjct: 209 MTPATVIALDVKEEKL-KLAERLGADHVVDARRDPVKQVMELTRGRGVNVAMDFVGSQAT 267

Query: 261 LMPLIGLLKSQGKLVLVGAPEKPLELPAFSLLMGRKIVGGSMIGGMKETQEMIDFAAKHN 320
           +     LL   G+L++VG   + L  P   ++       GS++G   E  E++  A +  
Sbjct: 268 VDYTPYLLGRMGRLIIVGYGGE-LRFPTIRVISSEVSFEGSLVGNYVELHELVTLALQGK 326

Query: 321 IRADIEVIPADYVNTALERLAKADVRYRFVI 351
           +R ++++   D +N  LERL K +V  R V+
Sbjct: 327 VRVEVDIHKLDEINDVLERLEKGEVLGRAVL 357

>1jvb_A NAD(H)-dependent alcohol dehydrogenase; archaeon, zinc, oxidoreductase; HET: MSE; 1.85A {Sulfolobus solfataricus} SCOP: b.35.1.2 c.2.1.1 PDB: 1r37_A* 1nto_A 1nvg_A 3i4c_A 2eer_A* Length = 347

 Score =  251 bits (643), Expect = 2e-81
 Identities = 90/332 (27%), Positives = 138/332 (41%), Gaps = 26/332 (7%)

Query: 36  GEKDVTFKVTHCGICHSDLHMIKNEWGNTI--------YPIVPGHEIVGVVTEVGSKVSK 87
               V  KV   G+CHSD+HM +  +GN           P+  GHEI G + EVG +V  
Sbjct: 24  KGPQVLIKVEAAGVCHSDVHMRQGRFGNLRIVEDLGVKLPVTLGHEIAGKIEEVGDEVVG 83

Query: 88  FKVGDKVGVGCMVGSCRSCDSCAIDLENYCPKVIMTYANKYHDGTITYGGYSDIMVADEH 147
           +  GD V V    G   +C  C I  E+ C             G    G Y++ ++   +
Sbjct: 84  YSKGDLVAVNPWQG-EGNCYYCRIGEEHLCDSPRWL-------GINFDGAYAEYVIVPHY 135

Query: 148 FVVRIPEGTPLDATAPLLCAGITVYSPLRFYGLDKPGMHVGVVG-LGGLGHVAVKFAKAM 206
             +           APL C+GIT Y  +R   L  P   + VVG  GGLG +AV+ AKA+
Sbjct: 136 KYMYKLRRLNAVEAAPLTCSGITTYRAVRKASL-DPTKTLLVVGAGGGLGTMAVQIAKAV 194

Query: 207 -GVKVTVISTSPSKKSEAIERLGADSFLVSRDQDEMQAAM-----GTMDGIIDTVSAVHP 260
            G  +  +        EA +R GAD  + +  QD +           +D +ID  ++   
Sbjct: 195 SGATIIGVDVREEAV-EAAKRAGADYVINASMQDPLAEIRRITESKGVDAVIDLNNSEKT 253

Query: 261 LMPLIGLLKSQGKLVLVGAPEKPLELPAFSLLMGRKIVGGSMIGGMKETQEMIDFAAKHN 320
           L      L  QGK V+VG     L   A  + +      GS++G   +   ++  A    
Sbjct: 254 LSVYPKALAKQGKYVMVGLFGADLHYHAPLITLSEIQFVGSLVGNQSDFLGIMRLAEAGK 313

Query: 321 IRADI-EVIPADYVNTALERLAKADVRYRFVI 351
           ++  I + +  +  N A++ L       R V+
Sbjct: 314 VKPMITKTMKLEEANEAIDNLENFKAIGRQVL 345

>3jv7_A ADH-A; dehydrogenase, nucleotide binding, rossmann-fold, oxidoreduc; HET: NAD; 2.00A {Rhodococcus ruber} PDB: 2xaa_A* Length = 345

 Score =  244 bits (626), Expect = 5e-79
 Identities = 83/324 (25%), Positives = 130/324 (40%), Gaps = 12/324 (3%)

Query: 36  GEKDVTFKVTHCGICHSDLHMIKNEWG--NTIYPIVPGHEIVGVVTEVGSKVSKFKVGDK 93
           G  ++  KVT  G+CHSD+ ++           P+  GHE VG V E+G  V+ F VGD 
Sbjct: 24  GPGEILLKVTAAGLCHSDIFVMDMPAAQYAYGLPLTLGHEGVGTVAELGEGVTGFGVGDA 83

Query: 94  VGVGCMVGSCRSCDSCAIDLENYCPKVIMTYANKYHDGTITYGGYSDIMVADEHFVVRIP 153
           V V      C +C +CA   ENYC +           G  + G  ++ M+ D    +   
Sbjct: 84  VAV-YGPWGCGACHACARGRENYCTRAAD--LGITPPGLGSPGSMAEYMIVDSARHLVPI 140

Query: 154 EGTPLDATAPLLCAGITVYSPLRFYGLD-KPGMHVGVVGLGGLGHVAVKFAKAMG-VKVT 211
                 A APL  AG+T Y  +        PG    V+G+GGLGHV ++  +A+   +V 
Sbjct: 141 GDLDPVAAAPLTDAGLTPYHAISRVLPLLGPGSTAVVIGVGGLGHVGIQILRAVSAARVI 200

Query: 212 VISTSPSKKSEAIERLGADSFLVSRDQ--DEMQAAMGTM--DGIIDTVSAVHPLMPLIGL 267
            +     +       +GAD+ + S     D ++   G      + D V A   +     +
Sbjct: 201 AVDLDDDRL-ALAREVGADAAVKSGAGAADAIRELTGGQGATAVFDFVGAQSTIDTAQQV 259

Query: 268 LKSQGKLVLVGAPEKPLELPAFSLLMGRKIVGGSMIGGMKETQEMIDFAAKHNIRADIEV 327
           +   G + +VG          F ++     V     G   E  E++  A    +    E 
Sbjct: 260 VAVDGHISVVGIHAGAHAKVGFFMIPFGASVVTPYWGTRSELMEVVALARAGRLDIHTET 319

Query: 328 IPADYVNTALERLAKADVRYRFVI 351
              D    A  RL +  +R R V+
Sbjct: 320 FTLDEGPAAYRRLREGSIRGRGVV 343

>1vj0_A Alcohol dehydrogenase, zinc-containing; TM0436, structural G JCSG, PSI, protein structure initiative, joint center for S genomics; 2.00A {Thermotoga maritima} SCOP: b.35.1.2 c.2.1.1 Length = 380

 Score =  167 bits (425), Expect = 9e-49
 Identities = 82/332 (24%), Positives = 131/332 (39%), Gaps = 29/332 (8%)

Query: 36  GEKDVTFKVTHCGICHSDLHMIKNEWGNTIYPIVPGHEIVGVVTEVGSKVS-----KFKV 90
               +  ++   G+C SD+HM + E      PI+ GHE  G V EV  +         K 
Sbjct: 41  PRGSILVEILSAGVCGSDVHMFRGEDPRVPLPIILGHEGAGRVVEVNGEKRDLNGELLKP 100

Query: 91  GDKVGVGCMVGSCRSCDSCAIDLENYCPKVIMTYANKYHDGTITY----GGYSD-IMVAD 145
           GD + V     +C  C  C +  E Y       Y    + G   Y    G YS  I++  
Sbjct: 101 GDLI-VWNRGITCGECYWCKVSKEPYLCPNRKVYG--INRGCSEYPHLRGCYSSHIVLDP 157

Query: 146 EHFVVRIPEGTPLDATAPLLCAGITVYSPLRFYGLDKPGMHVGVVGLGGLGHVAVKFAKA 205
           E  V+++ E   LD  A  +C+G T Y     Y     G  V + G G LG   V  A++
Sbjct: 158 ETDVLKVSEKDDLDVLAMAMCSGATAYHAFDEYPESFAGKTVVIQGAGPLGLFGVVIARS 217

Query: 206 MG-VKVTVISTSPSKKSEAIERLGADSFLVSRDQD--EMQAAMGTM------DGIIDTVS 256
           +G   V VI+ SP++   A E +GAD  L  R+    E + A+  +      D I++   
Sbjct: 218 LGAENVIVIAGSPNRLKLA-EEIGADLTLNRRETSVEERRKAIMDITHGRGADFILEATG 276

Query: 257 AVHPLMPLIGLLKSQGKLVLVG--APEKPLELPAFSLLMGR-KIVGGSMIGGMKETQEMI 313
               L+    LL+  G   + G   P+ P+    +  L+ +     G  +       + +
Sbjct: 277 DSRALLEGSELLRRGGFYSVAGVAVPQDPVPFKVYEWLVLKNATFKGIWVSDTSHFVKTV 336

Query: 314 DFAAKHNIRAD---IEVIPADYVNTALERLAK 342
              +++           +P    N ALE +  
Sbjct: 337 SITSRNYQLLSKLITHRLPLKEANKALELMES 368

>2d8a_A PH0655, probable L-threonine 3-dehydrogenase; pyrococcus horikoshii OT3, structural genomics; HET: NAD; 2.05A {Pyrococcus horikoshii} PDB: 2dfv_A* 3gfb_A* Length = 348

 Score =  152 bits (386), Expect = 3e-43
 Identities = 72/303 (23%), Positives = 124/303 (40%), Gaps = 29/303 (9%)

Query: 36  GEKDVTFKVTHCGICHSDLHMIK-NEWGNTI--YPIVPGHEIVGVVTEVGSKVSKFKVGD 92
           G  +V  KV    IC +DLH+ + NEW  +    P + GHE+ G V E+G  V   +VGD
Sbjct: 28  GPGEVLIKVLATSICGTDLHIYEWNEWAQSRIKPPQIMGHEVAGEVVEIGPGVEGIEVGD 87

Query: 93  KVGVGCMVGSCRSCDSCAIDLENYCPKVIMTYANKYHDGTITYGGYSDIMVADEHFVVRI 152
            V V   +  C  C +C     + C    +        G  T G +++  V     + + 
Sbjct: 88  YVSVETHI-VCGKCYACRRGQYHVCQNTKIF-------GVDTDGVFAEYAVVPAQNIWKN 139

Query: 153 PEGTPLDATA---PLLCAGITVYSPLRFYGLDKPGMHVGVVGLGGLGHVAVKFAKAMGV- 208
           P+  P +      PL  A   V + L        G  V + G G LG + +  AKA G  
Sbjct: 140 PKSIPPEYATLQEPLGNA---VDTVLAG---PISGKSVLITGAGPLGLLGIAVAKASGAY 193

Query: 209 KVTVISTSPSKKSEAIERLGADSFLVSRDQDEMQAAMGTMDG-----IIDTVSAVHPLMP 263
            V V   S  ++  A +++GAD  +   ++D ++  M   DG      ++   A   L  
Sbjct: 194 PVIVSEPSDFRRELA-KKVGADYVINPFEEDVVKEVMDITDGNGVDVFLEFSGAPKALEQ 252

Query: 264 LIGLLKSQGKLVLVGAPEKPLELPAFSLLMGRKI-VGGSMIGGMKET-QEMIDFAAKHNI 321
            +  +   G++ L+G     + +   +L++ + + + G     + ET   +        +
Sbjct: 253 GLQAVTPAGRVSLLGLYPGKVTIDFNNLIIFKALTIYGITGRHLWETWYTVSRLLQSGKL 312

Query: 322 RAD 324
             D
Sbjct: 313 NLD 315

>4ej6_A Putative zinc-binding dehydrogenase; structural genomics, nysgrc, PSI-biology, NEW YORK structura genomics research consortium; 1.89A {Sinorhizobium meliloti} PDB: 4ejm_A* Length = 370

 Score =  152 bits (386), Expect = 4e-43
 Identities = 77/323 (23%), Positives = 124/323 (38%), Gaps = 32/323 (9%)

Query: 36  GEKDVTFKVTHCGICHSDLHMIKNEWGNTIYPIVPGHEIVGVVTEVGSKVSKFKVGDKVG 95
           G  D+  KV  CGIC +D H++  E+  +  P+  GHE  G+V E GS V     G ++ 
Sbjct: 46  GPDDLLVKVEACGICGTDRHLLHGEFP-STPPVTLGHEFCGIVVEAGSAVRDIAPGARI- 103

Query: 96  VGCMVGSCRSCDSCAIDLENYCPKVIMTYANKYHDGTITYGGYSDIMVADEHFVVRIPEG 155
            G    SC  C  C     N C  +          G    GG+++ ++        IP  
Sbjct: 104 TGDPNISCGRCPQCQAGRVNLCRNLRAI-------GIHRDGGFAEYVLVPRKQAFEIPLT 156

Query: 156 TPLDATA---PLLCAGITVYSPLRFYGLDKPGMHVGVVGLGGLGHVAVKFAKAMGV-KVT 211
                 A   PL C    ++         K G  V ++G G +G + V+ A+  G   V 
Sbjct: 157 LDPVHGAFCEPLACC---LHGVDL--SGIKAGSTVAILGGGVIGLLTVQLARLAGATTVI 211

Query: 212 VISTSPSKKSEAIERLGADSFLVSRDQDEMQAAMGTMDG-------IIDTVSAVHPLMPL 264
           + +   +K+  A E +GA + +     D ++A  G +         +I+       +   
Sbjct: 212 LSTRQATKRRLA-EEVGATATVDPSAGDVVEAIAGPVGLVPGGVDVVIECAGVAETVKQS 270

Query: 265 IGLLKSQGKLVLVG--APEKPLELPAFSLLMGRKIVGGSMIGGMKETQEMIDFAAKHNIR 322
             L K+ G +V++G     + +E+  F +L     V GS I      +   D  A   I 
Sbjct: 271 TRLAKAGGTVVILGVLPQGEKVEIEPFDILFRELRVLGSFINPF-VHRRAADLVATGAIE 329

Query: 323 AD--I-EVIPADYVNTALERLAK 342
            D  I   I  D     +   A 
Sbjct: 330 IDRMISRRISLDEAPDVISNPAA 352

>2cdc_A Glucose dehydrogenase glucose 1-dehydrogenase, DHG-1; reductase, oxidoreductase, MDR family; HET: XYS XYP NAP; 1.50A {Sulfolobus solfataricus} PDB: 2cdb_A* 2cd9_A 2cda_A* Length = 366

 Score =  151 bits (382), Expect = 1e-42
 Identities = 63/340 (18%), Positives = 113/340 (33%), Gaps = 38/340 (11%)

Query: 33  RATGEKDVTFKVTHCGICHSDLHMIKNEWGNTIYP-----IVPGHEIVGVVTEVGSKVSK 87
           +      +  +  + GIC +D  ++  +   +  P     +V GHE +GVV E       
Sbjct: 22  KLDSYGKIKIRTIYNGICGADREIVNGKLTLSTLPKGKDFLVLGHEAIGVVEES---YHG 78

Query: 88  FKVGDKVGVGCMVGSCRSCDSCAIDLENYCPKVIMTYANKYHDGTITYGGYSDIMVADEH 147
           F  GD V        C  C +C +   ++C       A  +       G   +    D  
Sbjct: 79  FSQGDLVMPVNRR-GCGICRNCLVGRPDFCETGEFGEAGIHK----MDGFMREWWYDDPK 133

Query: 148 FVVRIPEGTPLDA--TAPLLCA---------GITVYSPLRFYGLDKPGMHVGVVGLGGLG 196
           ++V+IP+          PL                               V VVG G +G
Sbjct: 134 YLVKIPKSIEDIGILAQPLADIEKSIEEILEVQKRVPVWTCDDGTLNCRKVLVVGTGPIG 193

Query: 197 HVAVKFAKAMGVKVTVISTS--PSKKSEAIERLGADSFLVSRDQDEMQAAMGTMDGIIDT 254
            +     +  G++V + +       +   IE    + +  S   D+++ ++G  D IID 
Sbjct: 194 VLFTLLFRTYGLEVWMANRREPTEVEQTVIEETKTNYYNSSNGYDKLKDSVGKFDVIIDA 253

Query: 255 V-SAVHPLMPLIGLLKSQGKLVLVGAPEK---PLELPAFSLLMGRKI-VGGSMIGGMKET 309
             + V+ L  +I LL   G L L G       PL+      ++     + G + G     
Sbjct: 254 TGADVNILGNVIPLLGRNGVLGLFGFSTSGSVPLDYKTLQEIVHTNKTIIGLVNGQKPHF 313

Query: 310 QEMIDFAAKHNIRADIEV-------IPADYVNTALERLAK 342
           Q+ +   A                 +  +     L+ L +
Sbjct: 314 QQAVVHLASWKTLYPKAAKMLITKTVSINDEKELLKVLRE 353

>2eih_A Alcohol dehydrogenase; zinc ION binding protein, structural genomics, NPPSFA, natio project on protein structural and functional analyses; 2.30A {Thermus thermophilus} Length = 343

 Score =  148 bits (375), Expect = 9e-42
 Identities = 70/328 (21%), Positives = 129/328 (39%), Gaps = 19/328 (5%)

Query: 36  GEKDVTFKVTHCGICHSDLHMIKNEWGNTI-YPIVPGHEIVGVVTEVGSKVSKFKVGDKV 94
           G K+V  ++    + H D+ + K      +  P V G +  GVV  VG  V  F  GD+V
Sbjct: 26  GPKEVRVRLKAAALNHLDVWVRKGVASPKLPLPHVLGADGSGVVDAVGPGVEGFAPGDEV 85

Query: 95  GVGCMVGSCRSCDSCAIDLENYCPKVIMTYANKYHDGTITYGGYSDIMVADEHFVVRIPE 154
            V     SC  C+ C    +N CP+  +        G   +G Y++ +V  E  +   P+
Sbjct: 86  -VINPGLSCGRCERCLAGEDNLCPRYQIL-------GEHRHGTYAEYVVLPEANLAPKPK 137

Query: 155 GTPLDATAPLLCAGITVYSPLRFYGLDKPGMHVGVVG-LGGLGHVAVKFAKAMGVKVTVI 213
               +  A +    +T +  +      +PG  V V+    G+   A++ AK  G +V   
Sbjct: 138 NLSFEEAAAIPLTFLTAWQMVVDKLGVRPGDDVLVMAAGSGVSVAAIQIAKLFGARVIAT 197

Query: 214 STSPSKKSEAIERLGADSFLVSRDQDEMQAAMGTMDG-----IIDTVSAVHPLMPLIGLL 268
           + S  K     + LGAD  +     D  +       G     ++D   A++    +I   
Sbjct: 198 AGSEDKL-RRAKALGADETVNYTHPDWPKEVRRLTGGKGADKVVDHTGALY-FEGVIKAT 255

Query: 269 KSQGKLVLVGAPE-KPLELPAFSLLMGRKIVGGSMIGGMKETQEMIDFAAKHNIRADI-E 326
            + G++ + GA       LP   +   +  + GS +        ++ F  +  ++  + +
Sbjct: 256 ANGGRIAIAGASSGYEGTLPFAHVFYRQLSILGSTMASKSRLFPILRFVEEGKLKPVVGQ 315

Query: 327 VIPADYVNTALERLAKADVRYRFVIDVA 354
           V+P +        L +  V  + V+ V 
Sbjct: 316 VLPLEAAAEGHRLLEERRVFGKVVLQVG 343

>4a2c_A Galactitol-1-phosphate 5-dehydrogenase; oxidoreductase, metal binding-site; 1.87A {Escherichia coli} Length = 346

 Score =  146 bits (372), Expect = 3e-41
 Identities = 71/327 (21%), Positives = 126/327 (38%), Gaps = 35/327 (10%)

Query: 36  GEKDVTFKVTHCGICHSDLHMIKNEWGNTIYPIVPGHEIVGVVTEVGSKVSKFKVGDKVG 95
            + +V  K+   G+C SDL  I    G   YPI  GHE  G +  VGS V     GD V 
Sbjct: 24  HQDEVRVKIASSGLCGSDLPRIFKN-GAHYYPITLGHEFSGYIDAVGSGVDDLHPGDAV- 81

Query: 96  VGCMVGSCRSCDSCAIDLENYCPKVIMTYANKYHDGTITYGGYSDIMVADEHFVVRIPEG 155
               +  C +C  C     + C K           G+   GG+++ +V     V  +P  
Sbjct: 82  ACVPLLPCFTCPECLKGFYSQCAKYDFI-------GSRRDGGFAEYIVVKRKNVFALPTD 134

Query: 156 TPLDATA---PLLCAGITVYSPLRFYGLDKPGMHVGVVGLGGLGHVAVKFAKAMGV-KVT 211
            P++  A   P+      +++            +V ++G G +G +A++ A A+G   VT
Sbjct: 135 MPIEDGAFIEPITVG---LHAFHL--AQGCENKNVIIIGAGTIGLLAIQCAVALGAKSVT 189

Query: 212 VISTSPSKKSEAIERLGADSFLVSRDQDEMQAAMGTMDG-----IIDTVSAVHPLMPLIG 266
            I  S  K + A +  GA     S +    Q      +      I++T      +   + 
Sbjct: 190 AIDISSEKLALA-KSFGAMQTFNSSEMSAPQMQSVLRELRFNQLILETAGVPQTVELAVE 248

Query: 267 LLKSQGKLVLVGAPEKPLELPA--FSLLMGRKI-VGGSMIG-----GMKETQEMIDFAAK 318
           +     +L LVG   + L L +  F  ++ +++ V GS +        +E +       +
Sbjct: 249 IAGPHAQLALVGTLHQDLHLTSATFGKILRKELTVIGSWMNYSSPWPGQEWETASRLLTE 308

Query: 319 HNIRAD--I-EVIPADYVNTALERLAK 342
             +  +  I      +    A+  +A+
Sbjct: 309 RKLSLEPLIAHRGSFESFAQAVRDIAR 335

>2dq4_A L-threonine 3-dehydrogenase; NAD-dependent, oxidoreductase, structural genomics, NPPSFA; HET: MES; 2.50A {Thermus thermophilus} PDB: 2ejv_A* Length = 343

 Score =  140 bits (355), Expect = 7e-39
 Identities = 60/301 (19%), Positives = 112/301 (37%), Gaps = 26/301 (8%)

Query: 36  GEKDVTFKVTHCGICHSDLHMIK-NEWGNTI--YPIVPGHEIVGVVTEVGSKVSKFKVGD 92
           G  ++  +V    IC +DLH+ K + W       P+V GHE  GVV  VG  V + +VGD
Sbjct: 24  GPGEILVRVEAASICGTDLHIWKWDAWARGRIRPPLVTGHEFSGVVEAVGPGVRRPQVGD 83

Query: 93  KVGVGCMVGSCRSCDSCAIDLENYCPKVIMTYANKYHDGTITYGGYSDIMVADEHFVVRI 152
            V +   +  C +C +C     + C    +        G    GG+++ +V         
Sbjct: 84  HVSLESHI-VCHACPACRTGNYHVCLNTQIL-------GVDRDGGFAEYVVVPAENAWVN 135

Query: 153 PEGTPLDATA---PLLCAGITVYSPLRFYGLDKPGMHVGVVGLGGLGHVAVKFAKAMGV- 208
           P+  P +  A   P   A   V++          G  V + G G +G +A    +A G  
Sbjct: 136 PKDLPFEVAAILEPFGNA---VHTVYAG-SG-VSGKSVLITGAGPIGLMAAMVVRASGAG 190

Query: 209 KVTVISTSPSKKSEAIERLGADSFLVSRD--QDEMQAAMGT-MDGIIDTVSAVHPLMPLI 265
            + V   +P + + A             +   + ++   G+ ++ +++       +   +
Sbjct: 191 PILVSDPNPYRLAFA-RPYADRLVNPLEEDLLEVVRRVTGSGVEVLLEFSGNEAAIHQGL 249

Query: 266 GLLKSQGKLVLVGAPEKPLELPAFSLLMGRKI-VGGSMIGGMKET-QEMIDFAAKHNIRA 323
             L   G+  ++G P  P+       L+ R I   G     + +T  +         +  
Sbjct: 250 MALIPGGEARILGIPSDPIRFDLAGELVMRGITAFGIAGRRLWQTWMQGTALVYSGRVDL 309

Query: 324 D 324
            
Sbjct: 310 S 310

>1e3i_A Alcohol dehydrogenase, class II; HET: NAD; 2.08A {Mus musculus} SCOP: b.35.1.2 c.2.1.1 PDB: 1e3e_A* 1e3l_A* 3cos_A* Length = 376

 Score =  140 bits (356), Expect = 1e-38
 Identities = 77/335 (22%), Positives = 130/335 (38%), Gaps = 36/335 (10%)

Query: 43  KVTHCGICHSDLHMIKNEWGNTIYPIVPGHEIVGVVTEVGSKVSKFKVGDKVGVGCMVGS 102
           +V    +C +D++    +    ++P+V GHE  G+V  VG  V+ FK GDKV +      
Sbjct: 39  QVIATCVCPTDINATDPKK-KALFPVVLGHECAGIVESVGPGVTNFKPGDKV-IPFFAPQ 96

Query: 103 CRSCDSCAIDLENYCPKVIMTYANKYH-----DGT--ITYGG-----------YSDIMVA 144
           C+ C  C   L N C K+              D T   T  G           +S   V 
Sbjct: 97  CKRCKLCLSPLTNLCGKLRNFKYPTIDQELMEDRTSRFTCKGRSIYHFMGVSSFSQYTVV 156

Query: 145 DEHFVVRIPEGTPLDATAPLLCAGITVYSPLRFYGLDKPGMHVGVVGLGGLGHVAVKFAK 204
            E  + R+ +   L+    + C   + Y          PG    V GLG +G  A+   K
Sbjct: 157 SEANLARVDDEANLERVCLIGCGFSSGYGAAINTAKVTPGSTCAVFGLGCVGLSAIIGCK 216

Query: 205 AMG-VKVTVISTSPSKKSEAIERLGADSFLVSRDQDE-MQAAM-----GTMDGIIDTVSA 257
             G  ++  I  +  K  +A + LGA   L  R+ D+ +Q  +     G +D  +D    
Sbjct: 217 IAGASRIIAIDINGEKFPKA-KALGATDCLNPRELDKPVQDVITELTAGGVDYSLDCAGT 275

Query: 258 VHPLMP-LIGLLKSQGKLVLVGAPEKPLELPAFSLLMGRKIVGGSMIGGMKETQE---MI 313
              L   +   +   G   +VGA    + +P   +++GR I  G+  GG K       ++
Sbjct: 276 AQTLKAAVDCTVLGWGSCTVVGAKVDEMTIPTVDVILGRSIN-GTFFGGWKSVDSVPNLV 334

Query: 314 DFAAKHNIRADI---EVIPADYVNTALERLAKADV 345
                     D+     +P + +N A++ + +   
Sbjct: 335 SDYKNKKFDLDLLVTHALPFESINDAIDLMKEGKS 369

>3uog_A Alcohol dehydrogenase; structural genomics, protein structure initiative, PSI-biolo YORK structural genomics research consortium; 2.20A {Sinorhizobium meliloti 1021} Length = 363

 Score =  138 bits (351), Expect = 4e-38
 Identities = 68/315 (21%), Positives = 125/315 (39%), Gaps = 21/315 (6%)

Query: 36  GEKDVTFKVTHCGICHSDLHMIKNEWGNTI-YPIVPGHEIVGVVTEVGSKVSKFKVGDKV 94
           GE D+  +     + + D  +++   G  + +P VP  ++ GVV  VG  V++F+ GD+V
Sbjct: 52  GEHDIIVRTLAVSLNYRDKLVLETGMGLDLAFPFVPASDMSGVVEAVGKSVTRFRPGDRV 111

Query: 95  GVGCMVGSCRSCDSCAIDLENYCPKVIMTYANKYHDGTITYGGYSDIMVADEHFVVRIPE 154
            +                       +          G    G  S+ +V  E + V  P+
Sbjct: 112 -ISTFAPGWLDGLRPGTGRTPAYETL----------GGAHPGVLSEYVVLPEGWFVAAPK 160

Query: 155 GTPLDATAPLLCAGITVYSPLRFYGLDKPGMHVGVVGLGGLGHVAVKFAKAMGVKVTVIS 214
                  + L CAG+T +  L   G  + G  V V G GG+    ++ AKA G +V V S
Sbjct: 161 SLDAAEASTLPCAGLTAWFALVEKGHLRAGDRVVVQGTGGVALFGLQIAKATGAEVIVTS 220

Query: 215 TSPSKKSEAIERLGADSFLVSRDQDEMQAAMGTMDG-----IIDTVSAVHPLMPLIGLLK 269
           +S  +K +    LGAD  +   ++D ++             I++       L   +  + 
Sbjct: 221 SSR-EKLDRAFALGADHGINRLEEDWVERVYALTGDRGADHILEIAGGAG-LGQSLKAVA 278

Query: 270 SQGKLVLVGAPEKPL-ELPAFSLLMGRKIVGGSMIGGMKETQEMIDFAAKHNIRADI-EV 327
             G++ ++G  E      P   LL+   +V G  +G  +  ++++    +  ++  I   
Sbjct: 279 PDGRISVIGVLEGFEVSGPVGPLLLKSPVVQGISVGHRRALEDLVGAVDRLGLKPVIDMR 338

Query: 328 IPADYVNTALERLAK 342
                V  AL  L +
Sbjct: 339 YKFTEVPEALAHLDR 353

>2fzw_A Alcohol dehydrogenase class III CHI chain; S-nitrosoglutathione reductase, glutathione-dependent formaldehyde dehydrogenase, oxidoreductase; HET: NAD; 1.84A {Homo sapiens} SCOP: b.35.1.2 c.2.1.1 PDB: 3qj5_A* 1mc5_A* 2fze_A* 1m6w_A* 1ma0_A* 1mp0_A* 1teh_A* 1m6h_A* Length = 373

 Score =  138 bits (350), Expect = 7e-38
 Identities = 74/292 (25%), Positives = 116/292 (39%), Gaps = 27/292 (9%)

Query: 40  VTFKVTHCGICHSDLHMIKNEWGNTIYPIVPGHEIVGVVTEVGSKVSKFKVGDKVGVGCM 99
           V  K+    +CH+D + +        +P++ GH   G+V  VG  V+K K GD V +   
Sbjct: 34  VRIKIIATAVCHTDAYTLSGADPEGCFPVILGHLGAGIVESVGEGVTKLKAGDTV-IPLY 92

Query: 100 VGSCRSCDSCAIDLENYCPKVIMTYANKYH-DGT--ITYGG-----------YSDIMVAD 145
           +  C  C  C     N C K+ +T       DGT   T  G           +S+  V  
Sbjct: 93  IPQCGECKFCLNPKTNLCQKIRVTQGKGLMPDGTSRFTCKGKTILHYMGTSTFSEYTVVA 152

Query: 146 EHFVVRIPEGTPLDATAPLLCAGITVYSPLRFYGLDKPGMHVGVVGLGGLGHVAVKFAKA 205
           +  V +I    PLD    L C   T Y         +PG    V GLGG+G   +   K 
Sbjct: 153 DISVAKIDPLAPLDKVCLLGCGISTGYGAAVNTAKLEPGSVCAVFGLGGVGLAVIMGCKV 212

Query: 206 MGV-KVTVISTSPSKKSEAIERLGADSFLVSRDQDE-MQAAM-----GTMDGIIDTVSAV 258
            G  ++  +  +  K + A +  GA   +  +D  + +Q  +     G +D   + +  V
Sbjct: 213 AGASRIIGVDINKDKFARA-KEFGATECINPQDFSKPIQEVLIEMTDGGVDYSFECIGNV 271

Query: 259 HPLMPLIGLL-KSQGKLVLVG--APEKPLELPAFSLLMGRKIVGGSMIGGMK 307
             +   +    K  G  V+VG  A  + +    F L+ GR    G+  GG K
Sbjct: 272 KVMRAALEACHKGWGVSVVVGVAASGEEIATRPFQLVTGRTWK-GTAFGGWK 322

>1cdo_A Alcohol dehydrogenase; oxidoreductase, oxidoreductase (CH-OH(D)-NAD(A)); HET: NAD; 2.05A {Gadus callarias} SCOP: b.35.1.2 c.2.1.1 Length = 374

 Score =  138 bits (350), Expect = 7e-38
 Identities = 84/346 (24%), Positives = 134/346 (38%), Gaps = 33/346 (9%)

Query: 36  GEKDVTFKVTHCGICHSDLHMIKNEWGNTIYPIVPGHEIVGVVTEVGSKVSKFKVGDKVG 95
              ++  K+   G+CH+DL+ +        +P+V GHE  G+V  VG  V++F+ G+KV 
Sbjct: 32  HANEIRIKIIATGVCHTDLYHLFEGKHKDGFPVVLGHEGAGIVESVGPGVTEFQPGEKV- 90

Query: 96  VGCMVGSCRSCDSCAIDLENYCPKVIMTYANKYH-DGT--ITYGG-----------YSDI 141
           +   +  C  C  C     N C K     +           T  G           +S  
Sbjct: 91  IPLFISQCGECRFCQSPKTNQCVKGWANESPDVMSPKETRFTCKGRKVLQFLGTSTFSQY 150

Query: 142 MVADEHFVVRIPEGTPLDATAPLLCAGITVYSPLRFYGLDKPGMHVGVVGLGGLGHVAVK 201
            V ++  V +I    PLD    L C   T +         +PG    V GLG +G  AV 
Sbjct: 151 TVVNQIAVAKIDPSAPLDTVCLLGCGVSTGFGAAVNTAKVEPGSTCAVFGLGAVGLAAVM 210

Query: 202 FAKAMGV-KVTVISTSPSKKSEAIERLGADSFLVSRDQDE-MQAAM-----GTMDGIIDT 254
              + G  ++  +  +P K  +A +  GA  F+   D  E +   +     G +D  ++ 
Sbjct: 211 GCHSAGAKRIIAVDLNPDKFEKA-KVFGATDFVNPNDHSEPISQVLSKMTNGGVDFSLEC 269

Query: 255 VSAVHPLMP-LIGLLKSQGKLVLVG-APEKPLELPAFSLLMGRKIVGGSMIGGMKETQEM 312
           V  V  +   L   LK  G  VLVG      +      L+ GR    GSM GG K    +
Sbjct: 270 VGNVGVMRNALESCLKGWGVSVLVGWTDLHDVATRPIQLIAGRTWK-GSMFGGFKGKDGV 328

Query: 313 ---IDFAAKHNIRADI---EVIPADYVNTALERLAKADVRYRFVID 352
              +       ++ D      +P + VN A++ +       R V+ 
Sbjct: 329 PKMVKAYLDKKVKLDEFITHRMPLESVNDAIDLMKHGKC-IRTVLS 373

>1f8f_A Benzyl alcohol dehydrogenase; rossmann fold, oxidoreductase; HET: NAD; 2.20A {Acinetobacter calcoaceticus} SCOP: b.35.1.2 c.2.1.1 Length = 371

 Score =  136 bits (346), Expect = 3e-37
 Identities = 74/338 (21%), Positives = 127/338 (37%), Gaps = 32/338 (9%)

Query: 36  GEKDVTFKVTHCGICHSDLHMIKNEWGNTIYPIVPGHEIVGVVTEVGSKVSKFKVGDKVG 95
              +V  KV   G+CH+DL +   ++     P V GHE  G++  +G  V++ +VGD   
Sbjct: 30  QGDEVLVKVVATGMCHTDLIVRDQKY-PVPLPAVLGHEGSGIIEAIGPNVTELQVGDH-- 86

Query: 96  VGCMVGSCRSCDSCAIDLENYCPKVIM----------TYANKYHDGTITYGGY------S 139
           V    G C  C  C      YC +              +A   HD  +    +      +
Sbjct: 87  VVLSYGYCGKCTQCNTGNPAYCSEFFGRNFSGADSEGNHALCTHDQGVVNDHFFAQSSFA 146

Query: 140 DIMVADEHFVVRIPEGTPLDATAPLLCAGITVYSPLRFYGLDKPGMHVGVVGLGGLGHVA 199
              ++ E+  V++ +  P++   PL C   T            P       G G +G  A
Sbjct: 147 TYALSRENNTVKVTKDVPIELLGPLGCGIQTGAGACINALKVTPASSFVTWGAGAVGLSA 206

Query: 200 VKFAKAMGV-KVTVISTSPSKKSEAIERLGADSFLVSRDQDEMQAAM----GTMDGIIDT 254
           +  AK  G   +  +    S+   A + LGA   + S+ QD + A      G ++  +++
Sbjct: 207 LLAAKVCGASIIIAVDIVESRLELAKQ-LGATHVINSKTQDPVAAIKEITDGGVNFALES 265

Query: 255 VSAVHPLMPLIGLLKSQGKLVLVGAP--EKPLELPAFSLLMGRKIVGGSMIGGMK---ET 309
             +   L   +  L   GK+ +VGAP      +     LL+G K + G + G        
Sbjct: 266 TGSPEILKQGVDALGILGKIAVVGAPQLGTTAQFDVNDLLLGGKTILGVVEGSGSPKKFI 325

Query: 310 QEMIDFAAKHNIRAD--IEVIPADYVNTALERLAKADV 345
            E++    +     D  ++    D +N A     K   
Sbjct: 326 PELVRLYQQGKFPFDQLVKFYAFDEINQAAIDSRKGIT 363

>2jhf_A Alcohol dehydrogenase E chain; oxidoreductase, metal coordination, NAD, zinc, inhibition, acetylation, metal-binding; HET: NAD; 1.0A {Equus caballus} SCOP: b.35.1.2 c.2.1.1 PDB: 1adc_A* 1adf_A* 1adg_A* 1adb_A* 1bto_A* 1heu_A* 1hf3_A* 1hld_A* 1lde_A* 1ldy_A* 1mg0_A* 1n92_A* 1p1r_A* 1ye3_A 1het_A* 2jhg_A* 2ohx_A* 2oxi_A* 3bto_A* 4dwv_A* ... Length = 374

 Score =  135 bits (343), Expect = 7e-37
 Identities = 73/296 (24%), Positives = 120/296 (40%), Gaps = 28/296 (9%)

Query: 36  GEKDVTFKVTHCGICHSDLHMIKNEWGNTIYPIVPGHEIVGVVTEVGSKVSKFKVGDKVG 95
              +V  K+   GIC SD H++      T  P++ GHE  G+V  +G  V+  + GDKV 
Sbjct: 32  KAHEVRIKMVATGICRSDDHVVSGTLV-TPLPVIAGHEAAGIVESIGEGVTTVRPGDKV- 89

Query: 96  VGCMVGSCRSCDSCAIDLENYCPKVIMTYANKY-HDGT--ITYGG-----------YSDI 141
           +      C  C  C     N+C K  ++       DGT   T  G           +S  
Sbjct: 90  IPLFTPQCGKCRVCKHPEGNFCLKNDLSMPRGTMQDGTSRFTCRGKPIHHFLGTSTFSQY 149

Query: 142 MVADEHFVVRIPEGTPLDATAPLLCAGITVYSPLRFYGLDKPGMHVGVVGLGGLGHVAVK 201
            V DE  V +I   +PL+    + C   T Y           G    V GLGG+G   + 
Sbjct: 150 TVVDEISVAKIDAASPLEKVCLIGCGFSTGYGSAVKVAKVTQGSTCAVFGLGGVGLSVIM 209

Query: 202 FAKAMGV-KVTVISTSPSKKSEAIERLGADSFLVSRDQDEMQAAM------GTMDGIIDT 254
             KA G  ++  +  +  K ++A + +GA   +  +D  +    +      G +D   + 
Sbjct: 210 GCKAAGAARIIGVDINKDKFAKA-KEVGATECVNPQDYKKPIQEVLTEMSNGGVDFSFEV 268

Query: 255 VSAVHPLMPLIGLL-KSQGKLVLVG--APEKPLELPAFSLLMGRKIVGGSMIGGMK 307
           +  +  ++  +    ++ G  V+VG     + L +    LL GR    G++ GG K
Sbjct: 269 IGRLDTMVTALSCCQEAYGVSVIVGVPPDSQNLSMNPMLLLSGRTWK-GAIFGGFK 323

>1e3j_A NADP(H)-dependent ketose reductase; oxidoreductase, fructose reduction; 2.3A {Bemisia argentifolii} SCOP: b.35.1.2 c.2.1.1 Length = 352

 Score =  135 bits (342), Expect = 8e-37
 Identities = 75/273 (27%), Positives = 114/273 (41%), Gaps = 28/273 (10%)

Query: 36  GEKDVTFKVTHCGICHSDLHMIKN-EWGNTI--YPIVPGHEIVGVVTEVGSKVSKFKVGD 92
            E +V  ++ + GIC SD+H  ++    + I   P+V GHE  G V +VG  V   K GD
Sbjct: 27  KEDEVLLQMAYVGICGSDVHYYEHGRIADFIVKDPMVIGHEASGTVVKVGKNVKHLKKGD 86

Query: 93  KVGVGCMVGSCRSCDSCAIDLENYCPKVIMTYANKYHDGTITYGGYSDIMVADEHFVVRI 152
           +V V   V  CR C  C     N CP   +T+     D     G  +   V    F  ++
Sbjct: 87  RVAVEPGV-PCRRCQFCKEGKYNLCPD--LTFCATPPDD----GNLARYYVHAADFCHKL 139

Query: 153 PEGTPLDATA---PLLCAGITVYSPLRFYGLDKPGMHVGVVGLGGLGHVAVKFAKAMGVK 209
           P+   L+  A   PL      V++  R     + G  V V+G G +G V+V  AKA G  
Sbjct: 140 PDNVSLEEGALLEPLSVG---VHACRR--AGVQLGTTVLVIGAGPIGLVSVLAAKAYGAF 194

Query: 210 VTVISTSPSKKSEAIERLGADSFLV--SRDQDEMQAAM-------GTMDGIIDTVSAVHP 260
           V   + SP +   A +  GAD  LV     ++E               +  ID       
Sbjct: 195 VVCTARSPRRLEVA-KNCGADVTLVVDPAKEEESSIIERIRSAIGDLPNVTIDCSGNEKC 253

Query: 261 LMPLIGLLKSQGKLVLVGAPEKPLELPAFSLLM 293
           +   I + ++ G L+LVG   + + +P  +   
Sbjct: 254 ITIGINITRTGGTLMLVGMGSQMVTVPLVNACA 286

>3ip1_A Alcohol dehydrogenase, zinc-containing; structural genomics, metal-binding, oxidoreductase, PSI-2, protein structure initiative; 2.09A {Thermotoga maritima} Length = 404

 Score =  136 bits (344), Expect = 8e-37
 Identities = 73/347 (21%), Positives = 136/347 (39%), Gaps = 49/347 (14%)

Query: 33  RATGEKDVTFKVTHCGICHSDLHMIK-NEWGNTI------YPIVPGHEIVGVVTEVGSKV 85
           R     ++  KV  CGIC SD+HM + +E G  +      +P+  GHE  GVV E G + 
Sbjct: 51  RIEKPTEIIIKVKACGICGSDVHMAQTDEEGYILYPGLTGFPVTLGHEFSGVVVEAGPEA 110

Query: 86  ------SKFKVGDKVGVGCMVGSCRSCDSCAIDLENYCPKVIMTYANKYHDGTITYGGYS 139
                  +F++G+ V    M+  C  C  CA    N+C  +          G    G ++
Sbjct: 111 INRRTNKRFEIGEPVCAEEML-WCGHCRPCAEGFPNHCENLNEL-------GFNVDGAFA 162

Query: 140 DIMVADEHFVVRIPEGT-------PLDATA---PLLCAGITVYSPLRFYGLDKPGMHVGV 189
           + +  D  +   + E            A +   P   A     + +   G  +PG +V +
Sbjct: 163 EYVKVDAKYAWSLRELEGVYEGDRLFLAGSLVEPTSVA---YNAVIVRGGGIRPGDNVVI 219

Query: 190 VGLGGLGHVAVKFAKAMGV-KVTVISTSPSKKSEAIERLGADSFLVSRDQDEMQAAMGTM 248
           +G G +G  AV   K  G  KV +   S  +++ A + LGAD  +    ++ ++A +   
Sbjct: 220 LGGGPIGLAAVAILKHAGASKVILSEPSEVRRNLA-KELGADHVIDPTKENFVEAVLDYT 278

Query: 249 DG-----IIDTVSAVHPLMPLIGLLKSQGK-----LVLVGAPEKPLELPAFSLLMGRKIV 298
           +G      ++       + P I  +  + +     + +V   +  + L      + R  +
Sbjct: 279 NGLGAKLFLEATGVPQLVWPQIEEVIWRARGINATVAIVARADAKIPLTGEVFQVRRAQI 338

Query: 299 GGSMIGGMKET-QEMIDFAAKH-NIRADI-EVIPADYVNTALERLAK 342
            GS       T   +I   A   ++   I + +  + +   ++RL  
Sbjct: 339 VGSQGHSGHGTFPRVISLMASGMDMTKIISKTVSMEEIPEYIKRLQT 385

>1p0f_A NADP-dependent alcohol dehydrogenase; ADH topology, NADP(H)-dependent, oxidoreductase; HET: NAP; 1.80A {Rana perezi} SCOP: b.35.1.2 c.2.1.1 PDB: 1p0c_A* Length = 373

 Score =  133 bits (336), Expect = 7e-36
 Identities = 91/335 (27%), Positives = 140/335 (41%), Gaps = 34/335 (10%)

Query: 40  VTFKVTHCGICHSDLHMIKNEWGNTIYPIVPGHEIVGVVTEVGSKVSKFKVGDKVGVGCM 99
           V  K+   GIC SD  ++K     + +P++ GHE VGVV  +G+ V+  K GDKV +   
Sbjct: 37  VRIKILASGICGSDSSVLKEI-IPSKFPVILGHEAVGVVESIGAGVTCVKPGDKV-IPLF 94

Query: 100 VGSCRSCDSCAIDLENYCPKVIMTYANKYH-DGT--ITYGG-----------YSDIMVAD 145
           V  C SC +C     N+C K  M        D T   T  G           +++  V  
Sbjct: 95  VPQCGSCRACKSSNSNFCEKNDMGAKTGLMADMTSRFTCRGKPIYNLMGTSTFTEYTVVA 154

Query: 146 EHFVVRIPEGTPLDATAPLLCAGITVYSPLRFYGLDKPGMHVGVVGLGGLGHVAVKFAKA 205
           +  V +I    PL++   + C   T Y          PG    V GLGG+G  A+   KA
Sbjct: 155 DIAVAKIDPKAPLES-CLIGCGFATGYGAAVNTAKVTPGSTCAVFGLGGVGFSAIVGCKA 213

Query: 206 MG-VKVTVISTSPSKKSEAIERLGADSFLVSRDQDE-MQAAM-----GTMDGIIDTVSAV 258
            G  ++  + T   K  +A   LGA   L  +D D+ +   +     G +D  ++    +
Sbjct: 214 AGASRIIGVGTHKDKFPKA-IELGATECLNPKDYDKPIYEVICEKTNGGVDYAVECAGRI 272

Query: 259 HPL-MPLIGLLKSQGKLVLVG--APEKPLELPAFSLLMGRKIVGGSMIGGMKETQ--EMI 313
             +   L       G  V++G  +P + L L    LL GR +  GS+ GG K  +   ++
Sbjct: 273 ETMMNALQSTYCGSGVTVVLGLASPNERLPLDPLLLLTGRSLK-GSVFGGFKGEEVSRLV 331

Query: 314 DFAAKHNIRADI---EVIPADYVNTALERLAKADV 345
           D   K  I  +      +  D +N A E L+    
Sbjct: 332 DDYMKKKINVNFLVSTKLTLDQINKAFELLSSGQG 366

>4a0s_A Octenoyl-COA reductase/carboxylase; oxidoreductase, transferase, cinnabaramide PKS biosynthesis; HET: CO8 NAP; 1.90A {Streptomyces SP} PDB: 4a10_A Length = 447

 Score =  134 bits (339), Expect = 8e-36
 Identities = 58/363 (15%), Positives = 98/363 (26%), Gaps = 55/363 (15%)

Query: 36  GEKDVTFKVTHCGICHSDLHMIKNEWGNTIY------------------PIVPGHEIVGV 77
              +V   V    I ++ +     E   T +                    V G +  GV
Sbjct: 61  APDEVLVAVMASSINYNTVWSAMFEPIPTFHFLKQNARQGGWATRHDQPYHVLGSDCSGV 120

Query: 78  VTEVGSKVSKFKVGDKVGVGCMVGSCRSCDSCAIDLENYCPKVIMTYANKYHDGTITYGG 137
           V   G  V ++K GD V V          +           +               +GG
Sbjct: 121 VVRTGIGVRRWKPGDHVIVHPA--HVDEQEPATHGDGMLGTEQRAWG------FETNFGG 172

Query: 138 YSDIMVADEHFVVRIPEGTPLDATAPLLCAGITVYSPL--RFYGLDKPGMHVGVVGL-GG 194
            ++  V     ++  P     +  A       T Y  L        K G  V + G  GG
Sbjct: 173 LAEYGVVRASQLLPKPAHLTWEEAAVSPLCAGTAYRMLVSDRGAQMKQGDIVLIWGASGG 232

Query: 195 LGHVAVKFAKAMGVKVTVISTSPSKKSEAIERLGADSFLVSRDQDEMQAAMGTM------ 248
           LG  A++F K  G     + +S  K+  A+  LG D  +   +                 
Sbjct: 233 LGSYAIQFVKNGGGIPVAVVSSAQKE-AAVRALGCDLVINRAELGITDDIADDPRRVVET 291

Query: 249 ----------------DGIIDTVSAVHPLMPLIGLLKSQGKLVLVGAPEKP-LELPAFSL 291
                           D + +    V      + + +  G +V  G+            L
Sbjct: 292 GRKLAKLVVEKAGREPDIVFEHTGRVT-FGLSVIVARRGGTVVTCGSSSGYLHTFDNRYL 350

Query: 292 LMGRKIVGGSMIGGMKETQEMIDFAAKHNIRADI-EVIPADYVNTALERLAKADVRYRFV 350
            M  K + GS     +E Q          +   +  V P      A   +  +    +  
Sbjct: 351 WMKLKKIVGSHGANHEEQQATNRLFESGAVVPAMSAVYPLAEAAEACRVVQTSRQVGKVA 410

Query: 351 IDV 353
           +  
Sbjct: 411 VLC 413

>1pl8_A Human sorbitol dehydrogenase; NAD, oxidoreductase; HET: NAD; 1.90A {Homo sapiens} SCOP: b.35.1.2 c.2.1.1 PDB: 1pl7_A 1pl6_A* 3qe3_A Length = 356

 Score =  130 bits (330), Expect = 4e-35
 Identities = 73/279 (26%), Positives = 112/279 (40%), Gaps = 28/279 (10%)

Query: 36  GEKDVTFKVTHCGICHSDLHMIKN-EWGNTI--YPIVPGHEIVGVVTEVGSKVSKFKVGD 92
           G  +V  ++   GIC SD+H  +    GN I   P+V GHE  G V +VGS V   K GD
Sbjct: 30  GPNEVLLRMHSVGICGSDVHYWEYGRIGNFIVKKPMVLGHEASGTVEKVGSSVKHLKPGD 89

Query: 93  KVGVGCMVGSCRSCDSCAIDLENYCPKVIMTYANKYHDGTITYGGYSDIMVADEHFVVRI 152
           +V +        + + C +   N  P   + +     D     G        +  F  ++
Sbjct: 90  RVAIEPGA-PRENDEFCKMGRYNLSPS--IFFCATPPDD----GNLCRFYKHNAAFCYKL 142

Query: 153 PEGTPLDATA---PLLCAGITVYSPLRFYGLDKPGMHVGVVGLGGLGHVAVKFAKAMGV- 208
           P+    +  A   PL      +++  R  G    G  V V G G +G V +  AKAMG  
Sbjct: 143 PDNVTFEEGALIEPLSVG---IHACRR--GGVTLGHKVLVCGAGPIGMVTLLVAKAMGAA 197

Query: 209 KVTVISTSPSKKSEAIERLGADSFLVSRDQDEMQAAM-------GTMDGIIDTVSAVHPL 261
           +V V   S ++ S+A + +GAD  L    +   + A           +  I+   A   +
Sbjct: 198 QVVVTDLSATRLSKA-KEIGADLVLQISKESPQEIARKVEGQLGCKPEVTIECTGAEASI 256

Query: 262 MPLIGLLKSQGKLVLVGAPEKPLELPAFSLLM-GRKIVG 299
              I   +S G LVLVG   +   +P     +    I G
Sbjct: 257 QAGIYATRSGGTLVLVGLGSEMTTVPLLHAAIREVDIKG 295

>2b5w_A Glucose dehydrogenase; nucleotide binding motif, oxidoreductase; HET: FLC NAP; 1.60A {Haloferax mediterranei} PDB: 2b5v_A* 2vwg_A* 2vwh_A* 2vwp_A* 2vwq_A* Length = 357

 Score =  128 bits (324), Expect = 3e-34
 Identities = 51/308 (16%), Positives = 98/308 (31%), Gaps = 25/308 (8%)

Query: 36  GEKDVTFKVTHCGICHSDLHMIKNEWGNTI---YPIVPGHEIVGVVTEVGSKVSKFKVGD 92
              +   +    G+C +D  +I    G        +V GHE VGVV +     ++ + GD
Sbjct: 24  ESGEALVRTLRVGVCGTDHEVIAGGHGGFPEGEDHLVLGHEAVGVVVDPN--DTELEEGD 81

Query: 93  KVGVGCMVG-SCRSCDSCAIDLENYCPKVIMTYANKYHDGTITYGGYSDIMVADEHFVVR 151
            V        +  + +    D  +  P  +             +G  S+   + E ++VR
Sbjct: 82  IVVPTVRRPPASGTNEYFERDQPDMAPDGMYFERGIVG----AHGYMSEFFTSPEKYLVR 137

Query: 152 IPEGTPLDATA--PLLCAGITVY-SPLRFYGLDKPGMHVGVVGLGGLGHVAVKFAKAMG- 207
           IP           P+      +  +       D       V+G G LG + +   K    
Sbjct: 138 IPRSQAELGFLIEPISITEKALEHAYASRSAFDWDPSSAFVLGNGSLGLLTLAMLKVDDK 197

Query: 208 --VKVTVISTS--PSKKSEAIERLGADSFLVSRD-QDEMQAAMGTMDGIIDTVSAVHPLM 262
               +  +     P    + IE L A      +   +++      MD I +        +
Sbjct: 198 GYENLYCLGRRDRPDPTIDIIEELDATYVDSRQTPVEDVPDVYEQMDFIYEATGFPKHAI 257

Query: 263 PLIGLLKSQGKLVLVGAP-----EKPLELPAFSLLMGRKIVGGSMIGGMKETQE-MIDFA 316
             +  L   G   L+G P     E         +++  K + GS+   ++  +   + F 
Sbjct: 258 QSVQALAPNGVGALLGVPSDWAFEVDAGAFHREMVLHNKALVGSVNSHVEHFEAATVTFT 317

Query: 317 AKHNIRAD 324
                  +
Sbjct: 318 KLPKWFLE 325

>3krt_A Crotonyl COA reductase; structural genomics, protein structure initiative, NYSGXRC, PSI-2; 2.19A {Streptomyces coelicolor} PDB: 3hzz_A Length = 456

 Score =  129 bits (325), Expect = 7e-34
 Identities = 60/363 (16%), Positives = 114/363 (31%), Gaps = 55/363 (15%)

Query: 36  GEKDVTFKVTHCGICHSDLHMIKNEWGNTIY------------------PIVPGHEIVGV 77
           G  +    V    + ++ +H    E  +T                      V G ++ GV
Sbjct: 69  GPGEALVAVMASSVNYNSVHTSIFEPLSTFGFLERYGRVSDLAKRHDLPYHVIGSDLAGV 128

Query: 78  VTEVGSKVSKFKVGDKVGVGCMVGSCRSCDSCAIDLENYCPKVIMTYANKYHDGTITYGG 137
           V   G  V+ ++ GD+V           C S  ++  +     ++    +       +GG
Sbjct: 129 VLRTGPGVNAWQAGDEV--------VAHCLSVELESSDGHNDTMLDPEQRIWGFETNFGG 180

Query: 138 YSDIMVADEHFVVRIPEGTPLDATAPLLCAGITVYSPL--RFYGLDKPGMHVGVVGL-GG 194
            ++I +   + ++  P+    +  A       T Y  L  R     K G +V + G  GG
Sbjct: 181 LAEIALVKSNQLMPKPDHLSWEEAAAPGLVNSTAYRQLVSRNGAGMKQGDNVLIWGASGG 240

Query: 195 LGHVAVKFAKAMGVKVTVISTSPSKKSEAIERLGADSFLVSRDQDEMQAAMGTM------ 248
           LG  A +FA A G     + +SP K  E    +GA++ +    +                
Sbjct: 241 LGSYATQFALAGGANPICVVSSPQKA-EICRAMGAEAIIDRNAEGYRFWKDENTQDPKEW 299

Query: 249 ----------------DGIIDTVSAVHPLMPLIGLLKSQGKLVLVGAPEKP-LELPAFSL 291
                           D + +           + + +  G +    +      E     L
Sbjct: 300 KRFGKRIRELTGGEDIDIVFEHPGRET-FGASVFVTRKGGTITTCASTSGYMHEYDNRYL 358

Query: 292 LMGRKIVGGSMIGGMKETQEMIDFAAKHNIRADI-EVIPADYVNTALERLAKADVRYRFV 350
            M  K + GS     +E  E     AK  I   + +V   +    A   + +   + +  
Sbjct: 359 WMSLKRIIGSHFANYREAWEANRLIAKGRIHPTLSKVYSLEDTGQAAYDVHRNLHQGKVG 418

Query: 351 IDV 353
           +  
Sbjct: 419 VLC 421

>3m6i_A L-arabinitol 4-dehydrogenase; medium chain dehydrogenase/reductase, oxidoreductase; HET: NAD; 2.60A {Neurospora crassa} Length = 363

 Score =  118 bits (298), Expect = 1e-30
 Identities = 56/274 (20%), Positives = 99/274 (36%), Gaps = 30/274 (10%)

Query: 36  GEKDVTFKVTHCGICHSDLHMIKN-EWGNTI--YPIVPGHEIVGVVTEVGSKVSKFKVGD 92
            E +VT  V   GIC SD+H  K+   G  I     V GHE  G V  V   V   KVGD
Sbjct: 39  KEGEVTVAVRSTGICGSDVHFWKHGCIGPMIVECDHVLGHESAGEVIAVHPSVKSIKVGD 98

Query: 93  KVGVGCMVGSCRSCDSCAIDLENYCPKVIMTYANKYHDGTITYGGYSDIMVADEHFVVRI 152
           +V +   V  C +C+ C     N C +V               G     +     +  +I
Sbjct: 99  RVAIEPQV-ICNACEPCLTGRYNGCERVDFLSTPPVP------GLLRRYVNHPAVWCHKI 151

Query: 153 PEGTPLDATA---PLLCAGITVYSPLRFYGLDKPGMHVGVVGLGGLGHVAVKFAKAMGV- 208
                 +  A   PL    + +    R     + G  V + G G +G + +  AKA G  
Sbjct: 152 GN-MSYENGAMLEPL---SVALAGLQRAG--VRLGDPVLICGAGPIGLITMLCAKAAGAC 205

Query: 209 KVTVISTSPSKKSEAIERLGADSFLVSRD----QDEMQAAMGTMDG-----IIDTVSAVH 259
            + +      +   A + +  +      +    ++  +  + +  G      ++      
Sbjct: 206 PLVITDIDEGRLKFA-KEICPEVVTHKVERLSAEESAKKIVESFGGIEPAVALECTGVES 264

Query: 260 PLMPLIGLLKSQGKLVLVGAPEKPLELPAFSLLM 293
            +   I  +K  GK+ ++G  +  +++P     +
Sbjct: 265 SIAAAIWAVKFGGKVFVIGVGKNEIQIPFMRASV 298

>3goh_A Alcohol dehydrogenase, zinc-containing; NP_718042.1, alcohol dehydrogenase superfamily protein, ALCO dehydrogenase groes-like domain; 1.55A {Shewanella oneidensis} Length = 315

 Score =  115 bits (291), Expect = 5e-30
 Identities = 50/302 (16%), Positives = 96/302 (31%), Gaps = 58/302 (19%)

Query: 53  DLHMIKNEWGNTIYPIVPGHEIVGVVTEVGSKVSKFKVGDKVGVGCMVGSCRSCDSCAID 112
           D   IK    N     VPG +  GV+ +VG+KV    +G +V                  
Sbjct: 45  DWKFIKANPINWSNGHVPGVDGAGVIVKVGAKVDSKMLGRRV------------------ 86

Query: 113 LENYCPKVIMTYANKYHDGTITYGGYSDIMVADEHFVVRIPEGTPLDATAPLLCAGITVY 172
                          YH     +G +++  V +   V+ +P+    +  A L C  +T +
Sbjct: 87  -----------A---YHTSLKRHGSFAEFTVLNTDRVMTLPDNLSFERAAALPCPLLTAW 132

Query: 173 SPLRFYGLDKPGMHVGVVGLGGLGHVAVKFAKAMGVKVTVISTSPSKKSEAIERLGADSF 232
                  L      V +VG G + ++  +     G    V   S S       + G    
Sbjct: 133 QAFEKIPL-TKQREVLIVGFGAVNNLLTQMLNNAG--YVVDLVSASLSQALAAKRGVRHL 189

Query: 233 LVSRDQDEMQAAMGTMDGIIDTVSAVHPLMPLIGLLKSQGKLVLVGAPEKPLELPAFSLL 292
                Q   +        I D V++ +    L+  LK+ G ++ +         PAF+  
Sbjct: 190 YREPSQVTQK-----YFAIFDAVNSQN-AAALVPSLKANGHIICIQDRIPAPIDPAFTRT 243

Query: 293 MGRKIVGGSMIGGMKETQEMIDFAAKHNIRADI--------------EVIPADYVNTALE 338
           +    +    +G + +  +  D+         +              ++   + +  AL+
Sbjct: 244 ISYHEI---ALGALHDFGDRQDWQILMQQGEALLTLIAQGKMEIAAPDIFRFEQMIEALD 300

Query: 339 RL 340
             
Sbjct: 301 HS 302

>3tqh_A Quinone oxidoreductase; HET: NDP; 2.44A {Coxiella burnetii} Length = 321

 Score =  109 bits (274), Expect = 2e-27
 Identities = 66/289 (22%), Positives = 110/289 (38%), Gaps = 38/289 (13%)

Query: 67  PIVPGHEIVGVVTEVGSKVSKFKVGDKVGVGCMVGSCRSCDSCAIDLENYCPKVIMTYAN 126
           P   G++  G V E+GS V+   +GDKV                           M  A 
Sbjct: 68  PSGLGYDFSGEVIELGSDVNNVNIGDKV---------------------------MGIAG 100

Query: 127 KYHDGTITYGGYSDIMVADEHFVVRIPEGTPLDATAPLLCAGITVYSPLRFYGLDKPGMH 186
                      Y++ + A    +++  E       A L  AG+T    L    + K G  
Sbjct: 101 FPDHP----CCYAEYVCASPDTIIQKLEKLSFLQAASLPTAGLTALQALNQAEV-KQGDV 155

Query: 187 VGVVG-LGGLGHVAVKFAKAMGVKVTVISTSPSKKSEAIERLGADSFLVSRDQDEMQAAM 245
           V +    GG+GH+A++ AK  G   TVI+T+  +    ++ LGA+  +   ++D + A  
Sbjct: 156 VLIHAGAGGVGHLAIQLAKQKG--TTVITTASKRNHAFLKALGAEQCINYHEEDFLLAIS 213

Query: 246 GTMDGIIDTVSAVHPLMPLIGLLKSQGKLVLVGAPEKPLELPAFSLLMGRKIVGGSMIGG 305
             +D +ID V      +  I  LK  G +V V        +   +    R+  G      
Sbjct: 214 TPVDAVIDLVGG-DVGIQSIDCLKETGCIVSVPTITAG-RVIEVAKQKHRRAFGLLKQFN 271

Query: 306 MKETQEMIDFAAKHNIRADI-EVIPADYVNTALERLAKADVRYRFVIDV 353
           ++E   +    ++  +R +I  +       TA E L    VR + V  V
Sbjct: 272 IEELHYLGKLVSEDKLRIEISRIFQLSEAVTAHELLETGHVRGKLVFKV 320

>1zsy_A Mitochondrial 2-enoyl thioester reductase; medium-chain dehydrogenase/reductase, oxidoreductase, 2-ENOY thioester reductase; 1.75A {Homo sapiens} PDB: 2vcy_A Length = 357

 Score =  108 bits (271), Expect = 8e-27
 Identities = 65/340 (19%), Positives = 115/340 (33%), Gaps = 57/340 (16%)

Query: 36  GEKDVTFKVTHCGICHSDLHMIKNEWGNTI-YPIVPGHEIVGVVTEVGSKVSKFKVGDKV 94
              DV  K+    I  SD++MI+  +G     P V G+E V  V  VGS V+  K GD V
Sbjct: 53  RGSDVRVKMLAAPINPSDINMIQGNYGLLPELPAVGGNEGVAQVVAVGSNVTGLKPGDWV 112

Query: 95  GVGCMVGSCRSCDSCAIDLENYCPKVIMTYANKYHDGTITYGGYSDIMVADEHFVVRIPE 154
            +    G                                  G +    V  E  ++++P 
Sbjct: 113 -IPANAG---------------------------------LGTWRTEAVFSEEALIQVPS 138

Query: 155 GTPLDATAPLLCAGITVYSPLRFYGLDKPGMHVGVVGL-GGLGHVAVKFAKAMGVKVTVI 213
             PL + A L     T Y  L  +   +PG  V       G+G   ++ A A+G++   +
Sbjct: 139 DIPLQSAATLGVNPCTAYRMLMDFEQLQPGDSVIQNASNSGVGQAVIQIAAALGLRTINV 198

Query: 214 STSPSKKSEAIER---LGADSFLVSRDQDEMQAAMGTMDG-----IIDTVSAVHPLMPLI 265
                   +  +R   LGA+  +   +    +      D       ++ V        L+
Sbjct: 199 VRDRPDIQKLSDRLKSLGAEHVITEEELRRPEMKNFFKDMPQPRLALNCVGG-KSSTELL 257

Query: 266 GLLKSQGKLVLVGAP-EKPLELPAFSLLMGRKIVGGSMIGGMKETQ----------EMID 314
             L   G +V  G   ++P+      L+     + G  +   K+             + D
Sbjct: 258 RQLARGGTMVTYGGMAKQPVVASVSLLIFKDLKLRGFWLSQWKKDHSPDQFKELILTLCD 317

Query: 315 FAAKHNIRADI-EVIPADYVNTALERLAKADVRYRFVIDV 353
              +  + A     +P     +ALE   K  +  + ++ +
Sbjct: 318 LIRRGQLTAPACSQVPLQDYQSALEASMKPFISSKQILTM 357

>3fpc_A NADP-dependent alcohol dehydrogenase; oxydoreductase, bacterial alcohol dehydrogenase, domain exchange, chimera, metal-binding; 1.40A {Thermoanaerobacter brockii} PDB: 2nvb_A* 1ykf_A* 1bxz_A* 3ftn_A 3fsr_A 1y9a_A* 2oui_A* 3fpl_A* 1jqb_A 1kev_A* 1ped_A 2b83_A Length = 352

 Score =  103 bits (259), Expect = 3e-25
 Identities = 63/304 (20%), Positives = 110/304 (36%), Gaps = 44/304 (14%)

Query: 36  GEKDVTFKVTHCGICHSDLHMIKNEWGNTIYPIVPGHEIVGVVTEVGSKVSKFKVGDKVG 95
           G  D   +      C SD+H +        + ++ GHE VG V EVGS+V  FK GD+V 
Sbjct: 23  GPFDAIVRPLAVAPCTSDIHTVFEGAIGERHNMILGHEAVGEVVEVGSEVKDFKPGDRVV 82

Query: 96  VGCMVGSCRSCDSCAIDLENYCPKVIMTYANKYHDGTITYGGYSD-------IMVADEHF 148
           V  +                +   +          G                +  AD   
Sbjct: 83  VPAIT-PDWRTSEVQRGYHQHSGGM--------LAGWKFSNVKDGVFGEFFHVNDAD-MN 132

Query: 149 VVRIPEGTPLDATAPL---LCAGITVYSPLRFYGLD----KPGMHVGVVGLGGLGHVAVK 201
           +  +P+  PL+A   +   +  G        F+G +    K G  V V+G+G +G ++V 
Sbjct: 133 LAHLPKEIPLEAAVMIPDMMTTG--------FHGAELANIKLGDTVCVIGIGPVGLMSVA 184

Query: 202 FAKAMG-VKVTVISTSPSKKSEAIERLGADSFLVSRDQDEMQAAMGTMDGI-----IDTV 255
            A  +G  ++  + +       A    GA   +  ++ D ++  +   DG      +   
Sbjct: 185 GANHLGAGRIFAVGSRKHCCDIA-LEYGATDIINYKNGDIVEQILKATDGKGVDKVVIAG 243

Query: 256 SAVHPLMPLIGLLKSQGKLVLVGAPEKPLELP----AFSLLMGRK-IVGGSMIGGMKETQ 310
             VH     + ++K    +  V    +   +      + + MG K I GG   GG    +
Sbjct: 244 GDVHTFAQAVKMIKPGSDIGNVNYLGEGDNIDIPRSEWGVGMGHKHIHGGLCPGGRLRME 303

Query: 311 EMID 314
            +ID
Sbjct: 304 RLID 307

>3fbg_A Putative arginate lyase; structural genomics, unknown function, PSI-2, protein structure initiative; 1.60A {Staphylococcus haemolyticus} Length = 346

 Score =  100 bits (252), Expect = 3e-24
 Identities = 55/240 (22%), Positives = 97/240 (40%), Gaps = 55/240 (22%)

Query: 67  PIVPGHEIVGVVTEVGSKVSKFKVGDKVGVGCMVGSCRSCDSCAIDLENYCPKVIMTYAN 126
           P V G + +GVV  VG++V+ F  GD V                                
Sbjct: 60  PRVLGFDAIGVVESVGNEVTMFNQGDIV-------------------------------- 87

Query: 127 KYHDGTITYGG-YSDIMVADEHFVVRIPEGTPLD----ATAPLLCAGITVY------SPL 175
            Y+ G+    G  ++  + +E  V + P+   +      + PL   GIT Y        +
Sbjct: 88  -YYSGSPDQNGSNAEYQLINERLVAKAPKN--ISAEQAVSLPL--TGITAYETLFDVFGI 142

Query: 176 RFYGLDKPGMHVGVV-GLGGLGHVAVKFAKAMGVKVTVIST-SPSKKSEAIERLGADSFL 233
                +  G  + ++ G GG+G +A + AKA G  + VI+T S ++  E  +++GAD  L
Sbjct: 143 SRNRNENEGKTLLIINGAGGVGSIATQIAKAYG--LRVITTASRNETIEWTKKMGADIVL 200

Query: 234 VSRDQDEMQ---AAMGTMDGIIDTVSAVHPLMPLIGLLKSQGKLVLVGAPEKPLELPAFS 290
             ++    Q     +  +D +  T +       +I L+K +G +  + A E   +L A  
Sbjct: 201 NHKESLLNQFKTQGIELVDYVFCTFNTDMYYDDMIQLVKPRGHIATIVAFENDQDLNALK 260

>3gaz_A Alcohol dehydrogenase superfamily protein; oxidoreductase, PSI-II, alcohol dehydrogenase superf structural genomics; 1.96A {Novosphingobium aromaticivorans} Length = 343

 Score =  100 bits (251), Expect = 4e-24
 Identities = 48/220 (21%), Positives = 74/220 (33%), Gaps = 41/220 (18%)

Query: 67  PIVPGHEIVGVVTEVGSKVSKFKVGDKVGVGCMVGSCRSCDSCAIDLENYCPKVIMTYAN 126
           P + G ++ G V  VG +V  F+VGD V                                
Sbjct: 64  PAILGMDLAGTVVAVGPEVDSFRVGDAV--------------FG-------------LTG 96

Query: 127 KYHDGTITYGGYSDIMVADEHFVVRIPEGTPLD--ATAPLLCAGITVYSPLRFYGLDKPG 184
                    G ++     D   +   P    +   +  PL    IT +  L      + G
Sbjct: 97  GVGGLQ---GTHAQFAAVDARLLASKPAALTMRQASVLPL--VFITAWEGLVDRAQVQDG 151

Query: 185 MHVGV-VGLGGLGHVAVKFAKAMGVKVTVISTSPSKKSEAIERLGADSFLVSRDQDEMQA 243
             V +  G GG+GHVA++ A A G    V +T+     E +  LGA     SR+ ++  A
Sbjct: 152 QTVLIQGGGGGVGHVAIQIALARG--ARVFATARGSDLEYVRDLGATPIDASREPEDYAA 209

Query: 244 AM---GTMDGIIDTVSAVHPLMPLIGLLKSQGKLVLVGAP 280
                   D + DT+     L      +K  G +V     
Sbjct: 210 EHTAGQGFDLVYDTLGGPV-LDASFSAVKRFGHVVSCLGW 248

>2vn8_A Reticulon-4-interacting protein 1; mitochondrion, transit peptide, receptor inhibitor; HET: NDP CIT; 2.1A {Homo sapiens} Length = 375

 Score = 99.8 bits (249), Expect = 1e-23
 Identities = 50/245 (20%), Positives = 79/245 (32%), Gaps = 42/245 (17%)

Query: 67  PIVPGHEIVGVVTEVGSKVSKFKVGDKVGVGCMVGSCRSCDSCAIDLENYCPKVIMTYAN 126
           P+  G ++ GVV E G  V  FK GD+V    +                           
Sbjct: 95  PLTLGRDVSGVVMECGLDVKYFKPGDEV-WAAV--------------------------- 126

Query: 127 KYHDGTITYGGYSDIMVADEHFVVRIPEGTPLDATAPLLCAGITVYSPLRFYG----LDK 182
                    G  S+ +V   + V   P+       A L    +T +S +   G     + 
Sbjct: 127 ----PPWKQGTLSEFVVVSGNEVSHKPKSLTHTQAASLPYVALTAWSAINKVGGLNDKNC 182

Query: 183 PGMHVGVVG-LGGLGHVAVKFAKAMGVKVTVISTSPSKKSEAIERLGADSFLVSRDQD-- 239
            G  V ++G  GG+G  A++  KA      V +      SE + +LGAD  +  +     
Sbjct: 183 TGKRVLILGASGGVGTFAIQVMKAWD--AHVTAVCSQDASELVRKLGADDVIDYKSGSVE 240

Query: 240 EMQAAMGTMDGIIDTVSAVHPLMPLIGLLKSQGKLVLVGAPEKPLELPAFSLLMGRKIVG 299
           E   ++   D I+D V            LK       V      L       +    +  
Sbjct: 241 EQLKSLKPFDFILDNVGG-STETWAPDFLKKWSGATYVTLVTPFLLNMDRLGIADGMLQT 299

Query: 300 GSMIG 304
           G  +G
Sbjct: 300 GVTVG 304

>3pi7_A NADH oxidoreductase; groes-like fold, NAD(P)-binding rossmann fold, structural GE joint center for structural genomics, JCSG; HET: MSE; 1.71A {Mesorhizobium loti} Length = 349

 Score = 98.9 bits (247), Expect = 2e-23
 Identities = 49/303 (16%), Positives = 96/303 (31%), Gaps = 47/303 (15%)

Query: 10  PKNAFGWAAKDTSGVLSPFHFSRRATGEKDVTFKVTHCGICHSDLHMIKNEWGN-TIYPI 68
            K   G A +     L     +  A G   V  KV    I  SD+  IK ++G   +   
Sbjct: 22  TKTPSGSALEAMEPYLEQGRIAVPAPGPSQVLIKVNLASINPSDVAFIKGQYGQPRVKGR 81

Query: 69  VPGHEIVGVVTEVGSKV-SKFKVGDKVGVGCMVGSCRSCDSCAIDLENYCPKVIMTYANK 127
             G E VG +   G +  +K  VG +V                                 
Sbjct: 82  PAGFEGVGTIVAGGDEPYAKSLVGKRVAFAT----------------------------- 112

Query: 128 YHDGTITYGGYSDIMVADEHFVVRIPEGTPLDATAPLLCAGITVYSPLRFYGLDKPGMHV 187
              G   +G +++  VA+    + + +    +  A ++   +T  +        +     
Sbjct: 113 ---GLSNWGSWAEYAVAEAAACIPLLDTVRDEDGAAMIVNPLTAIAMFDIVKQ-EGEKAF 168

Query: 188 GVV--GLGGLGHVAVKFAKAMGVKVTVISTSPSKKSEAIERLGADSFLVSRDQD---EMQ 242
            V+  G   L  + +  AK  G +  V      +    ++ +GA   L  +  D    ++
Sbjct: 169 -VMTAGASQLCKLIIGLAKEEGFRPIVTVRRDEQI-ALLKDIGAAHVLNEKAPDFEATLR 226

Query: 243 AAMGT--MDGIIDTVSAVHPLMPLIGLLKSQGKLVLVGA--PEKPLELPAFSLLMGRKIV 298
             M        +D V+       +   +  + + ++ G   P+  +      L+   K +
Sbjct: 227 EVMKAEQPRIFLDAVTGPL-ASAIFNAMPKRARWIIYGRLDPDATVIREPGQLIFQHKHI 285

Query: 299 GGS 301
            G 
Sbjct: 286 EGF 288

>3gqv_A Enoyl reductase; medium-chain reductase (MDR superfamily), rossmann fold, NAD binding, oxidoreductase; HET: NAP; 1.74A {Aspergillus terreus} PDB: 3b6z_A* 3b70_A* Length = 371

 Score = 96.7 bits (241), Expect = 1e-22
 Identities = 51/320 (15%), Positives = 83/320 (25%), Gaps = 51/320 (15%)

Query: 36  GEKDVTFKVTHCGICHSDLHMIKNEWGNTIYPIVPGHEIVGVVTEVGSKVSKFKVGDKVG 95
               V  +V    I  SD  M              G +  G V  VGS V+  +VGD+V 
Sbjct: 35  PRDQVYVRVEAVAINPSDTSMRG---QFATPWAFLGTDYAGTVVAVGSDVTHIQVGDRV- 90

Query: 96  VGCMVGSCRSCDSCAIDLENYCPKVIMTYANKYHDGTITYGGYSDIMVADEHFVVRIPEG 155
            G     C                            T   G +S   V       +IP+G
Sbjct: 91  YGAQNEMCP--------------------------RTPDQGAFSQYTVTRGRVWAKIPKG 124

Query: 156 TPLDATAPLLCAGITVYSPLRFYGLDKPGMHVGVV-------------GLGGLGHVAVKF 202
              +  A L     T    ++  GL  P                    G      V ++ 
Sbjct: 125 LSFEQAAALPAGISTAGLAMKLLGLPLPSPSADQPPTHSKPVYVLVYGGSTATATVTMQM 184

Query: 203 AKAMGVKVTVISTSPSKKSEAIERLGADSFLVSRDQDEMQ----AAMGTMDGIIDTVSAV 258
            +  G     I+T      +  +  GA+     R  +  Q         +   +D ++ V
Sbjct: 185 LRLSG--YIPIATCSPHNFDLAKSRGAEEVFDYRAPNLAQTIRTYTKNNLRYALDCITNV 242

Query: 259 HPLMPLIGLLKSQGKLVLVGAPEKPLELPAFSLLMGRKIVGGSMIGGMKETQEMIDFAAK 318
                    +   G   +   P  P       ++     +G ++ G              
Sbjct: 243 ESTTFCFAAIGRAGGHYVSLNPF-PEHAATRKMVTTDWTLGPTIFGEGSTWPAPYGRPGS 301

Query: 319 HNIRADIEVIPADYVNTALE 338
              R   E +        +E
Sbjct: 302 EEERQFGEDL-WRIAGQLVE 320

>1yb5_A Quinone oxidoreductase; medium-chain dehydrogenase/reductase, quinon reduction, structural genomics, structural genomics consort; HET: NAP; 1.85A {Homo sapiens} SCOP: b.35.1.2 c.2.1.1 Length = 351

 Score = 94.2 bits (235), Expect = 8e-22
 Identities = 57/282 (20%), Positives = 105/282 (37%), Gaps = 56/282 (19%)

Query: 36  GEKDVTFKVTHCGICHSDLHMIKNEWGNTIYPI------VPGHEIVGVVTEVGSKVSKFK 89
            +  V  KV  CG+   + ++         Y         PG ++ GV+  VG   S FK
Sbjct: 56  KDHQVLIKVHACGVNPVETYIRSG-----TYSRKPLLPYTPGSDVAGVIEAVGDNASAFK 110

Query: 90  VGDKVGVGCMVGSCRSCDSCAIDLENYCPKVIMTYANKYHDGTITYGGYSDIMVADEHFV 149
            GD+V     +                                   GGY++  +A +H V
Sbjct: 111 KGDRVFTSSTIS----------------------------------GGYAEYALAADHTV 136

Query: 150 VRIPEGTPLDATAPLLCAGITVYSPLRFYGLDKPGMHVGVVG-LGGLGHVAVKFAKAMGV 208
            ++PE       A +     T Y  L      K G  V V G  GG+G  A + A+A G 
Sbjct: 137 YKLPEKLDFKQGAAIGIPYFTAYRALIHSACVKAGESVLVHGASGGVGLAACQIARAYG- 195

Query: 209 KVTVISTSPSK-KSEAIERLGADSFLVSRDQDEMQAAMGTMDG-----IIDTVSAVHPLM 262
            + ++ T+ ++   + + + GA      R+ + +      +       II+ ++ V+ L 
Sbjct: 196 -LKILGTAGTEEGQKIVLQNGAHEVFNHREVNYIDKIKKYVGEKGIDIIIEMLANVN-LS 253

Query: 263 PLIGLLKSQGKLVLVGAPEKPLELPAFSLLMGRKIVGGSMIG 304
             + LL   G++++VG+    +E+     +     + G  + 
Sbjct: 254 KDLSLLSHGGRVIVVGSR-GTIEINPRDTMAKESSIIGVTLF 294

>3gms_A Putative NADPH:quinone reductase; structural genomics, putative quinone oxidoreductase, unknown function, PSI-2; 1.76A {Bacillus thuringiensis} Length = 340

 Score = 93.8 bits (234), Expect = 9e-22
 Identities = 48/275 (17%), Positives = 93/275 (33%), Gaps = 48/275 (17%)

Query: 36  GEKDVTFKVTHCGICHSDLHMIKNEWGNTI-YPIVPGHEIVGVVTEVGSKVSKFKVGDKV 94
            + +V  ++    I  SDL  I   + + I  P +PG+E VG+V  VG+ VS+  +G +V
Sbjct: 31  KDNEVFVRMLVRPINPSDLIPITGAYAHRIPLPNIPGYEGVGIVENVGAFVSRELIGKRV 90

Query: 95  GVGCMVGSCRSCDSCAIDLENYCPKVIMTYANKYHDGTITYGGYSDIMVADEHFVVRIPE 154
                           +                        G + + +     FVV IP+
Sbjct: 91  --------------LPL---------------------RGEGTWQEYVKTSADFVVPIPD 115

Query: 155 GTPLDATAPLLCAGITVYSPLR-FYGLDKPGMHVGVVG-LGGLGHVAVKFAKAMGVKVTV 212
                  A +    +T +        L +    + V      +GH+  + ++ +     +
Sbjct: 116 SIDDFTAAQMYINPLTAWVTCTETLNL-QRNDVLLVNACGSAIGHLFAQLSQILN--FRL 172

Query: 213 IST-SPSKKSEAIERLGADSFLVSRDQDEMQAAMGTMDG-----IIDTVSAVHPLMPLIG 266
           I+    +K +E + RLGA   + +      +  M   +G      ID++        L  
Sbjct: 173 IAVTRNNKHTEELLRLGAAYVIDTSTAPLYETVMELTNGIGADAAIDSIGG-PDGNELAF 231

Query: 267 LLKSQGKLVLVGAPEKPLELPAFSLLMGRKIVGGS 301
            L+  G  + +G         A  +   +      
Sbjct: 232 SLRPNGHFLTIGLLSGIQVNWAEIVTKAKVHANIF 266

>1gu7_A Enoyl-[acyl-carrier-protein] reductase [NADPH, B-specific] 1,mitochondrial; oxidoreductase, thioester reduction, fatty acids; 1.70A {Candida tropicalis} SCOP: b.35.1.2 c.2.1.1 PDB: 1guf_A* 1n9g_B* 1n9g_A* 1gyr_A 1h0k_A Length = 364

 Score = 93.2 bits (232), Expect = 2e-21
 Identities = 50/350 (14%), Positives = 97/350 (27%), Gaps = 60/350 (17%)

Query: 36  GEKDVTFKVTHCGICHSDLHMIK----------NEWGNTIYPIVPGHEIVGVVTEVGSKV 85
              +V  K     +  SD++ I+            +G T      G+E +  V +VGS V
Sbjct: 32  APNEVIVKTLGSPVNPSDINQIQGVYPSKPAKTTGFGTTEPAAPCGNEGLFEVIKVGSNV 91

Query: 86  SKFKVGDKVGVGCMVGSCRSCDSCAIDLENYCPKVIMTYANKYHDGTITYGGYSDIMVAD 145
           S  + GD V +   V                      T+             +  +    
Sbjct: 92  SSLEAGDWV-IPSHVNFG-------------------TWRTH---ALGNDDDFIKLPNPA 128

Query: 146 EHFVVRIPEGTPLDATAPLLCAGITVYSPLRFYGLDKPGMHVGVV--GLGGLGHVAVKFA 203
           +      P G  ++  A +    +T Y  L  Y    PG    +   G   +G  A +  
Sbjct: 129 QSKANGKPNGLTINQGATISVNPLTAYLMLTHYVKLTPGKDWFIQNGGTSAVGKYASQIG 188

Query: 204 KAMGVKV-TVISTSPSK--KSEAIERLGADSFLVSRDQDEMQAAM----------GTMDG 250
           K +     +VI   P+      +++ LGA   +     +  +             G    
Sbjct: 189 KLLNFNSISVIRDRPNLDEVVASLKELGATQVITEDQNNSREFGPTIKEWIKQSGGEAKL 248

Query: 251 IIDTVSAVHPLMPLIGLLKSQGKLVLVGAPEK-PLELPAFSLLMGRKIVGGSMIGG---- 305
            ++ V        +   L + G ++  G     P+ +P    +       G  +      
Sbjct: 249 ALNCVGG-KSSTGIARKLNNNGLMLTYGGMSFQPVTIPTSLYIFKNFTSAGFWVTELLKN 307

Query: 306 -----MKETQEMIDFAAKHNIRADI-EVIPADYVNTALERLAKADVRYRF 349
                     ++I +  +  +          D      E         + 
Sbjct: 308 NKELKTSTLNQIIAWYEEGKLTDAKSIETLYDGTKPLHELYQDGVANSKD 357

>4a27_A Synaptic vesicle membrane protein VAT-1 homolog-L; oxidoreductase; 2.10A {Homo sapiens} Length = 349

 Score = 91.9 bits (229), Expect = 4e-21
 Identities = 57/305 (18%), Positives = 105/305 (34%), Gaps = 62/305 (20%)

Query: 36  GEKDVTFKVTHCGICHSDLHMIKNEWGNTI-YPIVPGHEIVGVVTEVGSKVSKFKVGDKV 94
            + ++  +V  CG+   DL + +    N    P+VPG E  G+V  +G  V  +++GD+V
Sbjct: 29  QDGELKIRVKACGLNFIDLMVRQGNIDNPPKTPLVPGFECSGIVEALGDSVKGYEIGDRV 88

Query: 95  GVGCMVGSCRSCDSCAIDLENYCPKVIMTYANKYHDGTITYGGYSDIMVADEHFVVRIPE 154
                          A                      + Y  +++++     FV +IP+
Sbjct: 89  --------------MAF---------------------VNYNAWAEVVCTPVEFVYKIPD 113

Query: 155 GTPLDATAPLLCAGITVYSPLRFYGLDKPGMHVGV-VGLGGLGHVAVKFAKAMGVKVTVI 213
                  A      +T Y  L      + GM V V    GG+G    +    +     V 
Sbjct: 114 DMSFSEAAAFPMNFVTAYVMLFEVANLREGMSVLVHSAGGGVGQAVAQLCSTVPNVT-VF 172

Query: 214 STSPSKKSEAIERLGADSFLVSRDQD---EMQAAMGT-MDGIIDTVSAVHPLMPLIGLLK 269
            T+ + K EAI+       L  R+ D   E++      +D ++D +   +     + LLK
Sbjct: 173 GTASTFKHEAIKDSVTH--LFDRNADYVQEVKRISAEGVDIVLDCLCGDN-TGKGLSLLK 229

Query: 270 SQGKLVLVG-----------------APEKPLELPAFSLLMGRKIVGGSMIGGMKETQEM 312
             G  +L G                 +  +  ++    L    K++ G  +  +   Q  
Sbjct: 230 PLGTYILYGSSNMVTGETKSFFSFAKSWWQVEKVNPIKLYEENKVIAGFSLLNLLFKQGR 289

Query: 313 IDFAA 317
                
Sbjct: 290 AGLIR 294

>4dvj_A Putative zinc-dependent alcohol dehydrogenase Pro; structural genomics, PSI-biology, NEW YORK structural genomi research consortium, nysgrc; 1.99A {Rhizobium etli} Length = 363

 Score = 92.0 bits (229), Expect = 4e-21
 Identities = 51/235 (21%), Positives = 87/235 (37%), Gaps = 46/235 (19%)

Query: 67  PIVPGHEIVGVVTEVGSKVSKFKVGDKVGVGCMVGSCRSCDSCAIDLENYCPKVIMTYAN 126
             V G++  G+V+ VG  V+ F+ GD+V                                
Sbjct: 82  WKVIGYDAAGIVSAVGPDVTLFRPGDEV-------------------------------- 109

Query: 127 KYHDGTITYGG-YSDIMVADEHFVVRIPEGTPLDATAPLLCAGITVYSPL-RFYGLDKPG 184
            ++ G+I   G  ++  + DE  V R P+       A L    IT +        ++KP 
Sbjct: 110 -FYAGSIIRPGTNAEFHLVDERIVGRKPKTLDWAEAAALPLTSITAWEAFFDRLDVNKPV 168

Query: 185 MHVG-----VVGLGGLGHVAVKFAKAMGVKVTVIST-SPSKKSEAIERLGADSFLVSRDQ 238
                    V G GG+G +AV+ A+     +TVI+T S  +  E ++ LGA   +     
Sbjct: 169 PGAAPAILIVGGAGGVGSIAVQIARQRT-DLTVIATASRPETQEWVKSLGAHHVIDHSKP 227

Query: 239 DEMQAA---MGTMDGIIDTVSAVHPLMPLIGLLKSQGKLVLVGAPEKPLELPAFS 290
              + A   +G    +  T         +  L+  QG+  L+  P    ++  F 
Sbjct: 228 LAAEVAALGLGAPAFVFSTTHTDKHAAEIADLIAPQGRFCLIDDPS-AFDIMLFK 281

>1kol_A Formaldehyde dehydrogenase; oxidoreductase; HET: NAD; 1.65A {Pseudomonas putida} SCOP: b.35.1.2 c.2.1.1 Length = 398

 Score = 91.2 bits (227), Expect = 1e-20
 Identities = 61/236 (25%), Positives = 88/236 (37%), Gaps = 30/236 (12%)

Query: 34  ATGEKDVTFKVTHCGICHSDLHMIKNEWGNTIYPIVPGHEIVGVVTEVGSKVSKFKVGDK 93
              E  V  KV    IC SD HM++         +V GHEI G V E G  V   ++GD 
Sbjct: 30  KKIEHGVILKVVSTNICGSDQHMVRGR-TTAQVGLVLGHEITGEVIEKGRDVENLQIGDL 88

Query: 94  VGVGCMVGSCRSCDSCAIDLENYCPKVIMTYANKYHDGTITYGGYSD-----------IM 142
           V V   V +C  C SC       C  V     N    G     GY D           ++
Sbjct: 89  VSVPFNV-ACGRCRSCKEMHTGVCLTV-----NPARAGGA--YGYVDMGDWTGGQAEYVL 140

Query: 143 V--ADEHFVVRIPEGTPLDATAP--LLCAGI--TVYSPLRFYGLDKPGMHVGVVGLGGLG 196
           V  AD   ++++P+              + I  T Y      G+  PG  V V G G +G
Sbjct: 141 VPYAD-FNLLKLPDRDKAMEKIRDLTCLSDILPTGYHGAVTAGV-GPGSTVYVAGAGPVG 198

Query: 197 HVAVKFAKAMGVK-VTVISTSPSKKSEAIERLGADSFLVSRDQDEMQAAMGTMDGI 251
             A   A+ +G   V V   +P++ + A +  G +   +S D    +     +   
Sbjct: 199 LAAAASARLLGAAVVIVGDLNPARLAHA-KAQGFEIADLSLDTPLHEQIAALLGEP 253

>2dph_A Formaldehyde dismutase; dismutation of aldehydes, oxidoreductase; HET: NAD; 2.27A {Pseudomonas putida} Length = 398

 Score = 89.6 bits (223), Expect = 4e-20
 Identities = 60/236 (25%), Positives = 92/236 (38%), Gaps = 34/236 (14%)

Query: 43  KVTHCGICHSDLHMIKNEWGNTIYP--IVPGHEIVGVVTEVGSKVSKFKVGDKVGVGCMV 100
           KV    IC SD H+ +   G  I P   V GHEI G V E GS V    +GD V V   V
Sbjct: 38  KVVSTNICGSDQHIYR---GRFIVPKGHVLGHEITGEVVEKGSDVELMDIGDLVSVPFNV 94

Query: 101 GSCRSCDSCAIDLENYCPKVIMTYANKYHDGTI---TYGGYSD-----IMV--ADEHFVV 150
            +C  C +C     + C        N   D         G+S      ++V  AD + ++
Sbjct: 95  -ACGRCRNCKEARSDVCEN---NLVNPDADLGAFGFDLKGWSGGQAEYVLVPYAD-YMLL 149

Query: 151 RIPEGTPLDATAP--LLCAGI--TVYSPLRFYGLDKPGMHVGVVGLGGLGHVAVKFAKAM 206
           +  +            L + I  T +      G+ KPG HV + G G +G  A   A+ +
Sbjct: 150 KFGDKEQAMEKIKDLTLISDILPTGFHGCVSAGV-KPGSHVYIAGAGPVGRCAAAGARLL 208

Query: 207 GVK-VTVISTSPSKKSEAIERLGADSFLVSRDQDEMQAAMGTM------DGIIDTV 255
           G   V V   +P +        G ++ +  R+   ++  +  +      D  +D V
Sbjct: 209 GAACVIVGDQNPERLKLL-SDAGFET-IDLRNSAPLRDQIDQILGKPEVDCGVDAV 262

>4dup_A Quinone oxidoreductase; PSI-biology, structural genomics, protein structure initiati structural genomics research consortium, nysgrc; 2.45A {Rhizobium etli} Length = 353

 Score = 88.8 bits (221), Expect = 5e-20
 Identities = 64/279 (22%), Positives = 104/279 (37%), Gaps = 55/279 (19%)

Query: 36  GEKDVTFKVTHCGICHSDLHMIKNEWGNTIYPI------VPGHEIVGVVTEVGSKVSKFK 89
           GE +V  +    G+   D+   +       YP       + G E+ G +  VG  VS + 
Sbjct: 54  GEGEVLVRAEAIGVNRPDIAQRQG-----SYPPPKDASPILGLELSGEIVGVGPGVSGYA 108

Query: 90  VGDKVGVGCMVGSCRSCDSCAIDLENYCPKVIMTYANKYHDGTITYGGYSDIMVADEHFV 149
           VGDKV              C +                        G Y++  +     +
Sbjct: 109 VGDKV--------------CGL---------------------ANGGAYAEYCLLPAGQI 133

Query: 150 VRIPEGTPLDATAPLLCAGITVYSPLRFYGLDKPGMHVGV-VGLGGLGHVAVKFAKAMGV 208
           +  P+G      A L     TV++ L        G  V +  G  G+G  A++ A+A G 
Sbjct: 134 LPFPKGYDAVKAAALPETFFTVWANLFQMAGLTEGESVLIHGGTSGIGTTAIQLARAFGA 193

Query: 209 KVTVISTSPSKKSEAIERLGADSFLVSRDQD---EMQAAMGT-MDGIIDTVSAVHPLMPL 264
           +V   + S  K  EA ERLGA   +  R +D    ++A  G  +D I+D + A +     
Sbjct: 194 EVYATAGSTGKC-EACERLGAKRGINYRSEDFAAVIKAETGQGVDIILDMIGAAY-FERN 251

Query: 265 IGLLKSQGKLVLVGAP--EKPLELPAFSLLMGRKIVGGS 301
           I  L   G L ++         ++    +++ R  V GS
Sbjct: 252 IASLAKDGCLSIIAFLGGAVAEKVNLSPIMVKRLTVTGS 290

>4eye_A Probable oxidoreductase; structural genomics, niaid, national institute of allergy AN infectious diseases; 2.10A {Mycobacterium abscessus} Length = 342

 Score = 87.3 bits (217), Expect = 2e-19
 Identities = 67/327 (20%), Positives = 111/327 (33%), Gaps = 67/327 (20%)

Query: 36  GEKDVTFKVTHCGICHSDLHMIKNEWGNTIYPI------VPGHEIVGVVTEVGSKVSKFK 89
           G   V   V   G+C  D  M K E     Y +      VPG E  GVV     + S  K
Sbjct: 47  GPNVVVVDVKAAGVCFPDYLMTKGE-----YQLKMEPPFVPGIETAGVVRSAP-EGSGIK 100

Query: 90  VGDKVGVGCMVGSCRSCDSCAIDLENYCPKVIMTYANKYHDGTITYGGYSDIMVADEHFV 149
            GD+V               A                         GGY++ +      +
Sbjct: 101 PGDRV--------------MAF---------------------NFIGGYAERVAVAPSNI 125

Query: 150 VRIPEGTPLDATAPLLCAGITVYSPLRFYGLDKPGMHVGVVG-LGGLGHVAVKFAKAMGV 208
           +  P          L+    T+Y      G  + G  V V+G  GG+G  A++ AK MG 
Sbjct: 126 LPTPPQLDDAEAVALIANYHTMYFAYARRGQLRAGETVLVLGAAGGIGTAAIQIAKGMGA 185

Query: 209 KVTVISTSPSKKSEAIERLGADSFLVSRDQDEMQAAMGTMDG-----IIDTVSAVHPLMP 263
           KV  +    +  +E ++ +GAD  ++  ++   +A      G     ++D +        
Sbjct: 186 KVIAVVNRTA-ATEFVKSVGAD-IVLPLEEGWAKAVREATGGAGVDMVVDPIGGPA-FDD 242

Query: 264 LIGLLKSQGKLVLVGAP--EKPLELPAFSLLMGRKIVGGSMIGGMKETQEMIDFAAKHNI 321
            +  L S+G+L++VG      P  +    LL+    + G   G    T     +  +  +
Sbjct: 243 AVRTLASEGRLLVVGFAAGGIP-TIKVNRLLLRNASLIGVAWGEFLRTHADYLYETQAGL 301

Query: 322 RADIE-----VIPADYVNTALERLAKA 343
              +       + A      L    +A
Sbjct: 302 EKLVAEGMRPPVSARI---PLSEGRQA 325

>1iz0_A Quinone oxidoreductase; APO-enzyme, riken structural genomics/proteomics initiative, RSGI, structural genomics; 2.30A {Thermus thermophilus} SCOP: b.35.1.2 c.2.1.1 PDB: 1iyz_A 2cf2_D Length = 302

 Score = 83.3 bits (207), Expect = 3e-18
 Identities = 61/275 (22%), Positives = 100/275 (36%), Gaps = 65/275 (23%)

Query: 36  GEKDVTFKVTHCGICHSDLHMIKNEWGNTIYPI------VPGHEIVGVVTEVGSKVSKFK 89
            E +V  +V   G+  +D  M         Y        +PG E+VGVV           
Sbjct: 24  EEGEVVLRVEAVGLNFADHLMRLGA-----YLTRLHPPFIPGMEVVGVV----------- 67

Query: 90  VGDKVGVGCMVGSCRSCDSCAIDLENYCPKVIMTYANKYHDGTITYGGYSDIMVADEHFV 149
            G +                A+                     +  GG ++ +   +  +
Sbjct: 68  EGRRY--------------AAL---------------------VPQGGLAERVAVPKGAL 92

Query: 150 VRIPEGTPLDATAPLLCAGITVYSPLRFYGLDKPGMHVGVVG-LGGLGHVAVKFAKAMGV 208
           + +PEG   +  A    + +T Y  L+     +PG  V V    G LG  AV+ A+AMG+
Sbjct: 93  LPLPEGLSPEEAAAFPVSFLTAYLALKRAQA-RPGEKVLVQAAAGALGTAAVQVARAMGL 151

Query: 209 KVTVISTSPSKKSEAIERLGADSFLVSRDQDEMQAAMGTMDGIIDTVSAVHPLMPLIGLL 268
           +V   ++ P K       LGA+      +  E   A G +D +++       +   +GLL
Sbjct: 152 RVLAAASRPEKL-ALPLALGAEEAATYAEVPERAKAWGGLDLVLEVRGKE--VEESLGLL 208

Query: 269 KSQGKLVLVGAP--EKPLELPAFSLLMGRKIVGGS 301
              G+LV +GA   E    +P   L+     V G 
Sbjct: 209 AHGGRLVYIGAAEGEVA-PIPPLRLMRRNLAVLGF 242

>1qor_A Quinone oxidoreductase; HET: NAP; 2.20A {Escherichia coli} SCOP: b.35.1.2 c.2.1.1 Length = 327

 Score = 81.1 bits (201), Expect = 2e-17
 Identities = 47/206 (22%), Positives = 75/206 (36%), Gaps = 38/206 (18%)

Query: 36  GEKDVTFKVTHCGICHSDLHMIKNEWGNTIYPIVPGHEIVGVVTEVGSKVSKFKVGDKVG 95
            E ++  +    GI   D ++    +     P   G E  G+V++VGS V   K GD+V 
Sbjct: 27  AENEIQVENKAIGINFIDTYIRSGLYPPPSLPSGLGTEAAGIVSKVGSGVKHIKAGDRVV 86

Query: 96  VGCMVGSCRSCDSCAIDLENYCPKVIMTYANKYHDGTITYGGYSDIMVADEHFVVRIPEG 155
                                       YA          G YS +          +P  
Sbjct: 87  ----------------------------YA------QSALGAYSSVHNIIADKAAILPAA 112

Query: 156 TPLDATAPLLCAGITVYSPLRFYGLDKPGMHVGVVGL-GGLGHVAVKFAKAMGVKVTVIS 214
              +  A     G+TVY  LR     KP          GG+G +A ++AKA+G    +I 
Sbjct: 113 ISFEQAAASFLKGLTVYYLLRKTYEIKPDEQFLFHAAAGGVGLIACQWAKALG--AKLIG 170

Query: 215 TSPSK-KSEAIERLGADSFLVSRDQD 239
           T  +  K+++  + GA   +  R++D
Sbjct: 171 TVGTAQKAQSALKAGAWQVINYREED 196

>3jyn_A Quinone oxidoreductase; rossmann fold, protein-NADPH complex; HET: NDP; 2.01A {Pseudomonas syringae PV} PDB: 3jyl_A* Length = 325

 Score = 79.9 bits (198), Expect = 4e-17
 Identities = 53/206 (25%), Positives = 82/206 (39%), Gaps = 38/206 (18%)

Query: 36  GEKDVTFKVTHCGICHSDLHMIKNEWGNTIYPIVPGHEIVGVVTEVGSKVSKFKVGDKVG 95
           G + V  +    G+   D +     +     P   G E  GVV  VG +V++FKVGD+V 
Sbjct: 27  GPQAVVVRNKAIGLNFIDTYYRSGLYPAPFLPSGLGAEGAGVVEAVGDEVTRFKVGDRVA 86

Query: 96  VGCMVGSCRSCDSCAIDLENYCPKVIMTYANKYHDGTITYGGYSDIMVADEHFVVRIPEG 155
                                       Y       T   G YS++ V  E  +V++ + 
Sbjct: 87  ----------------------------YG------TGPLGAYSEVHVLPEANLVKLADS 112

Query: 156 TPLDATAPLLCAGITVYSPLRFYGLDKPGMHVGV-VGLGGLGHVAVKFAKAMGVKVTVIS 214
              +  A L+  G+TV   LR     KPG  +      GG+G +A ++AKA+G    +I 
Sbjct: 113 VSFEQAAALMLKGLTVQYLLRQTYQVKPGEIILFHAAAGGVGSLACQWAKALG--AKLIG 170

Query: 215 TSPSK-KSEAIERLGADSFLVSRDQD 239
           T  S  K+   + LGA   +    +D
Sbjct: 171 TVSSPEKAAHAKALGAWETIDYSHED 196

>1wly_A CAAR, 2-haloacrylate reductase; NADPH-dependent oxidoreductase, oxidoreductase; 1.30A {Burkholderia SP} Length = 333

 Score = 80.0 bits (198), Expect = 5e-17
 Identities = 65/298 (21%), Positives = 106/298 (35%), Gaps = 52/298 (17%)

Query: 36  GEKDVTFKVTHCGICHSDLHM---IKNEWGNTIYPIVPGHEIVGVVTEVGSKVSKFKVGD 92
           G   V  + T  G+   D +    I +       PIV G E   VV EVG  V+ F VG+
Sbjct: 27  GPGQVRLRNTAIGVNFLDTYHRAGIPHPLVVGEPPIVVGFEAAAVVEEVGPGVTDFTVGE 86

Query: 93  KVGVGCMVGSCRSCDSCAIDLENYCPKVIMTYANKYHDGTITYGGYSDIMVADEHFVVRI 152
           +V                      C                  G YS   +     ++++
Sbjct: 87  RVC--------------------TC--------------LPPLGAYSQERLYPAEKLIKV 112

Query: 153 PEGTPLD--ATAPLLCAGITVYSPLRFYGLDKPGMHVGV-VGLGGLGHVAVKFAKAMGVK 209
           P+   LD    A L+  G+T    L      KPG +V +    GG+GH+ V +A+ +G  
Sbjct: 113 PKDLDLDDVHLAGLMLKGMTAQYLLHQTHKVKPGDYVLIHAAAGGMGHIMVPWARHLG-- 170

Query: 210 VTVISTSPSK-KSEAIERLGADSFLVSRDQDEMQAAMGTMDG-----IIDTVSAVHPLMP 263
            TVI T  ++ K+E   +LG    +    QD  +       G     + D++     L  
Sbjct: 171 ATVIGTVSTEEKAETARKLGCHHTINYSTQDFAEVVREITGGKGVDVVYDSIGKDT-LQK 229

Query: 264 LIGLLKSQGKLVLVGA---PEKPLELPAFSLLMGRKIVGGSMIGGMKETQEMIDFAAK 318
            +  L+ +G     G       P+ +     + G   +    +      +  ID  +K
Sbjct: 230 SLDCLRPRGMCAAYGHASGVADPIRVVEDLGVRGSLFITRPALWHYMSNRSEIDEGSK 287

>2j8z_A Quinone oxidoreductase; medium-chain dehydrogenase- reductases, QUIN oxidoreductase, oxidative stress response; HET: NAP; 2.50A {Homo sapiens} PDB: 2oby_A* Length = 354

 Score = 77.7 bits (192), Expect = 4e-16
 Identities = 60/276 (21%), Positives = 102/276 (36%), Gaps = 56/276 (20%)

Query: 36  GEKDVTFKVTHCGICHSDLHMIKNEWGNTIYPI------VPGHEIVGVVTEVGSKV-SKF 88
           GE +V  KV    +  +DL   + +     Y        + G E  G V E+G      +
Sbjct: 48  GEGEVLLKVAASALNRADLMQRQGQ-----YDPPPGASNILGLEASGHVAELGPGCQGHW 102

Query: 89  KVGDKVGVGCMVGSCRSCDSCAIDLENYCPKVIMTYANKYHDGTITYGGYSDIMVADEHF 148
           K+GD                 A+                     +  GG +  +   E  
Sbjct: 103 KIGDTA--------------MAL---------------------LPGGGQAQYVTVPEGL 127

Query: 149 VVRIPEGTPLDATAPLLCAGITVYSPLRFYGLDKPGMHVGV-VGLGGLGHVAVKFAKAMG 207
           ++ IPEG  L   A +  A +T +  L   G  + G +V +  GL G+G  A++  +  G
Sbjct: 128 LMPIPEGLTLTQAAAIPEAWLTAFQLLHLVGNVQAGDYVLIHAGLSGVGTAAIQLTRMAG 187

Query: 208 VKVTVISTSPSKKSEAIERLGADSFLVSRDQDEMQAAMGTMDG-----IIDTVSAVHPLM 262
               V + S  K  +  E+LGA +    + +D  +A +    G     I+D +   +   
Sbjct: 188 AIPLVTAGSQKKL-QMAEKLGAAAGFNYKKEDFSEATLKFTKGAGVNLILDCIGGSY-WE 245

Query: 263 PLIGLLKSQGKLVLVGAPE-KPLELPAFSLLMGRKI 297
             +  L   G+ VL G      +  P FS L+ ++ 
Sbjct: 246 KNVNCLALDGRWVLYGLMGGGDINGPLFSKLLFKRG 281

>2c0c_A Zinc binding alcohol dehydrogenase, domain containing 2; oxidoreductase, quinone oxidoreductase, medium-chain dehydrogenase/reductase; HET: NAP; 1.45A {Homo sapiens} PDB: 2x1h_A* 2x7h_A* 2wek_A* Length = 362

 Score = 76.5 bits (189), Expect = 8e-16
 Identities = 45/251 (17%), Positives = 84/251 (33%), Gaps = 54/251 (21%)

Query: 67  PIVPGHEIVGVVTEVG-SKVSKFKVGDKVGVGCMVGSCRSCDSCAIDLENYCPKVIMTYA 125
           P   G E +G V  +G S  +++ VG  V                               
Sbjct: 84  PFDIGFEGIGEVVALGLSASARYTVGQAVA------------------------------ 113

Query: 126 NKYHDGTITYGGYSDIMVADEHFVVRIPEGTPLDATAPLLCAGITVYSPLRFYGLDKPGM 185
                  +  G +++  V        +P          LL +G T Y  L+  G    G 
Sbjct: 114 ------YMAPGSFAEYTVVPASIATPVPSV--KPEYLTLLVSGTTAYISLKELGGLSEGK 165

Query: 186 HVGVV--GLGGLGHVAVKFAKAMGVKVTVISTSPSKKSEAIERLGADSFLVSRDQD---E 240
            V +V    GG G  A++ +K     V    +S  +KS  ++ LG D  +  + +     
Sbjct: 166 KV-LVTAAAGGTGQFAMQLSKKAKCHVIGTCSSD-EKSAFLKSLGCDRPINYKTEPVGTV 223

Query: 241 MQAAMGT-MDGIIDTVSAVHPLMPLIGLLKSQGKLVLVGA-----PEKPLELPAFSLLMG 294
           ++      +D + ++V         +  L ++G+L+++G          L       L  
Sbjct: 224 LKQEYPEGVDVVYESVGGAM-FDLAVDALATKGRLIVIGFISGYQTPTGLSPVKAGTLPA 282

Query: 295 RKIV-GGSMIG 304
           + +    S+ G
Sbjct: 283 KLLKKSASVQG 293

>3iup_A Putative NADPH:quinone oxidoreductase; YP_296108.1, structur genomics, joint center for structural genomics, JCSG, prote structure initiative; HET: MSE NDP; 1.70A {Ralstonia eutropha} Length = 379

 Score = 75.4 bits (185), Expect = 3e-15
 Identities = 26/174 (14%), Positives = 46/174 (26%), Gaps = 38/174 (21%)

Query: 67  PIVPGHEIVGVVTEVGSKVSKFKVGDKVGVGCMVGSCRSCDSCAIDLENYCPKVIMTYAN 126
            +  G+E  GVV E GS  +   +  K  V  + G                         
Sbjct: 91  SMPVGNEGAGVVVEAGSSPAAQALMGKT-VAAIGG------------------------- 124

Query: 127 KYHDGTITYGGYSDIMVADEHFVVRIPEGTPLDATAPLLCAGITVYSPLRFYGLDKPGMH 186
                      YS          + +PEG      A      +T    +    L +    
Sbjct: 125 ---------AMYSQYRCIPADQCLVLPEGATPADGASSFVNPLTALGMVETMRL-EGHSA 174

Query: 187 VGVVGL-GGLGHVAVKFAKAMGVKVTVISTSPSKKSEAIERLGADSFLVSRDQD 239
           +        LG +  +     G+K+  I     +  + ++  GA     +    
Sbjct: 175 LVHTAAASNLGQMLNQICLKDGIKLVNIVRKQEQA-DLLKAQGAVHVCNAASPT 227

>3slk_A Polyketide synthase extender module 2; rossmann fold, NADPH, oxidoreductase; HET: NDP; 3.00A {Saccharopolyspora spinosa} Length = 795

 Score = 72.5 bits (178), Expect = 5e-14
 Identities = 49/250 (19%), Positives = 73/250 (29%), Gaps = 62/250 (24%)

Query: 3   QAPEQEHPKNAFGWAAKDTSGVLSPFHF-----SRRATGEKDVTFKVTHCGICHSDLHMI 57
                  P            G L          +    G+ +V   +   G+   D  + 
Sbjct: 199 SDDVLPVPDGTGWRLEATRPGSLDGLALVDEPTATAPLGDGEVRIAMRAAGVNFRDALIA 258

Query: 58  KNEWGNTIYPIVPGHEIVGVVTEVGSKVSKFKVGDKVGVGCMVGSCRSCDSCAIDLENYC 117
              +         G E  GVV E G  V+    GD+V +G +  +               
Sbjct: 259 LGMYPG---VASLGSEGAGVVVETGPGVTGLAPGDRV-MGMIPKAFGP------------ 302

Query: 118 PKVIMTYANKYHDGTITYGGYSDIMVADEHFVVRIPEGTPLDATAPLLCAGITVYSPLRF 177
                                  + VAD   V RIP G      A +    +T Y     
Sbjct: 303 -----------------------LAVADHRMVTRIPAGWSFARAASVPIVFLTAY----- 334

Query: 178 YGLD-----KPGMHVGV-VGLGGLGHVAVKFAKAMGVKV--TVISTSPSKKSEAIERLGA 229
           Y L      +PG  + V    GG+G  A++ A+ +G +V  T    S  K       L  
Sbjct: 335 YALVDLAGLRPGESLLVHSAAGGVGMAAIQLARHLGAEVYATA---SEDKWQAV--ELSR 389

Query: 230 DSFLVSRDQD 239
           +    SR  D
Sbjct: 390 EHLASSRTCD 399

>3qwb_A Probable quinone oxidoreductase; rossmann fold, quinone oxidoreductases, NADPH, cytoplasm and oxidoreductase; HET: NDP; 1.59A {Saccharomyces cerevisiae} PDB: 3qwa_A* Length = 334

 Score = 70.3 bits (173), Expect = 9e-14
 Identities = 40/178 (22%), Positives = 63/178 (35%), Gaps = 42/178 (23%)

Query: 67  PIVPGHEIVGVVTEVGSKVSKFKVGDKVGVGCMVGSCRSCDSCAIDLENYCPKVIMTYAN 126
           P V G E  G V   G  V+ F+VGD+V                             Y  
Sbjct: 64  PYVLGREASGTVVAKGKGVTNFEVGDQVA----------------------------YI- 94

Query: 127 KYHDGTITYGGYSDIMVADEHFVVRIPEGTP---LDATAPLLCAGITVYSPLRFYGLDKP 183
                  T+  YS I       V+++P+GT    L   A  L   +T  S        K 
Sbjct: 95  ----SNSTFAQYSKISSQGP--VMKLPKGTSDEELKLYAAGLLQVLTALSFTNEAYHVKK 148

Query: 184 GMHVGV-VGLGGLGHVAVKFAKAMGVKVTVISTSPSK-KSEAIERLGADSFLVSRDQD 239
           G +V +    GG+G +  +  K  G     I+ + +  K +  +  GA+  + +  +D
Sbjct: 149 GDYVLLFAAAGGVGLILNQLLKMKG--AHTIAVASTDEKLKIAKEYGAEYLINASKED 204

>3nx4_A Putative oxidoreductase; csgid, structural genomics, center for struc genomics of infectious diseases, PSI, protein structure INI; HET: MSE NAP; 1.90A {Salmonella enterica subsp} PDB: 1o89_A 1o8c_A* Length = 324

 Score = 63.5 bits (155), Expect = 2e-11
 Identities = 55/302 (18%), Positives = 100/302 (33%), Gaps = 49/302 (16%)

Query: 66  YPIVPGHEIVGVVTEVGSKVSKFKVGDKVGVGCMVGSCRSCDSCAIDLENYCPKVIMTYA 125
           +P++PG +  G V    S+  +F  G +V +                             
Sbjct: 57  FPMIPGIDFAGTVHA--SEDPRFHAGQEVLL----------------------------- 85

Query: 126 NKYHDGTITYGGYSDIMVADEHFVVRIPEGTPLDATAPLLCAGITV---YSPLRFYGLDK 182
             +  G   +GG ++       ++V +P G        +  AG T       L   G+  
Sbjct: 86  TGWGVGENHWGGLAERARVKGDWLVALPAGLSSRNAMIIGTAGFTAMLCVMALEDAGIRP 145

Query: 183 PGMHVGVVG-LGGLGHVAVKFAKAMGVKVTVISTSPSKKSEAIERLGADSFLVSRDQDEM 241
               V V G  GG+G  AV     +G +V  + +        ++ LGA+  ++SRD+   
Sbjct: 146 QDGEVVVTGASGGVGSTAVALLHKLGYQVAAV-SGRESTHGYLKSLGANR-ILSRDEFAE 203

Query: 242 QAAMGTM--DGIIDTVSAVHPLMPLIGLLKSQGKLV---LVGAPEKPLELPAFSLLMGRK 296
              +      G IDTV     L  ++  +   G +    L G    P  +  F +L   +
Sbjct: 204 SRPLEKQLWAGAIDTVGD-KVLAKVLAQMNYGGCVAACGLAGGFALPTTVMPF-ILRNVR 261

Query: 297 IVG-GSMIGGMKETQEMIDFAAKH----NIRADIEVIPADYVNTALERLAKADVRYRFVI 351
           + G  S++       E      K             I         + +    V+ R ++
Sbjct: 262 LQGVDSVMTPPARRAEAWARLVKDLPESFYAQAATEITLADAPKFADAIINNQVQGRTLV 321

Query: 352 DV 353
            +
Sbjct: 322 KI 323

>1tt7_A YHFP; alcohol dehydrogenase, Zn-dependent, NAD, structural genomics, protein structure initiative, PSI; 2.70A {Bacillus subtilis} SCOP: b.35.1.2 c.2.1.1 PDB: 1y9e_A* Length = 330

 Score = 62.3 bits (152), Expect = 4e-11
 Identities = 41/200 (20%), Positives = 65/200 (32%), Gaps = 45/200 (22%)

Query: 66  YPIVPGHEIVGVVTEVGSKVSKFKVGDKVGVGCMVGSCRSCDSCAIDLENYCPKVIMTYA 125
           YP++ G +  G V    S   +F  GD+V                               
Sbjct: 61  YPLILGIDAAGTVVS--SNDPRFAEGDEVIA----------------------------- 89

Query: 126 NKYHDGTITYGGYSDIMVADEHFVVRIPEGTPLDATAPLLCAGITV---YSPLRFYGLDK 182
             Y  G    GG S+       ++V +P+   L        AG T       L   GL  
Sbjct: 90  TSYELGVSRDGGLSEYASVPGDWLVPLPQNLSLKEAMVYGTAGFTAALSVHRLEQNGLSP 149

Query: 183 PGMHVGVVG-LGGLGHVAVKFAKAMGVKVTVISTSPSKKSEAIERLGADSFLVSRDQDEM 241
               V V G  GG+G +AV      G  V    T   + ++ +++LGA   +    ++++
Sbjct: 150 EKGSVLVTGATGGVGGIAVSMLNKRGYDVVAS-TGNREAADYLKQLGASEVI---SREDV 205

Query: 242 QAAMG------TMDGIIDTV 255
                         G +D V
Sbjct: 206 YDGTLKALSKQQWQGAVDPV 225

>1xa0_A Putative NADPH dependent oxidoreductases; structural genomics, protein structure initiative, MCSG; HET: DTY; 2.80A {Geobacillus stearothermophilus} SCOP: b.35.1.2 c.2.1.1 Length = 328

 Score = 59.6 bits (145), Expect = 4e-10
 Identities = 68/310 (21%), Positives = 116/310 (37%), Gaps = 62/310 (20%)

Query: 66  YPIVPGHEIVGVVTEVGSKVSKFKVGDKVGVGCMVGSCRSCDSCAIDLENYCPKVIMTYA 125
           YP VPG ++ GVV    S+  +F+ GD+V                               
Sbjct: 60  YPFVPGIDLAGVVVS--SQHPRFREGDEVIA----------------------------- 88

Query: 126 NKYHDGTITYGGYSDIMVADEHFVVRIPEGTPLDATAPLLCAGITV---YSPLRFYGLDK 182
             Y  G   +GGYS+       ++V +P+G  L     +  AG T       L  +GL  
Sbjct: 89  TGYEIGVTHFGGYSEYARLHGEWLVPLPKGLTLKEAMAIGTAGFTAALSIHRLEEHGLTP 148

Query: 183 PGMHVGVVG-LGGLGHVAVKFAKAMGVKVTVISTSPSKKSEAIERLGADSFLVSRDQDEM 241
               V V G  GG+G +AV      G  V    T  + + + +  LGA   L    ++++
Sbjct: 149 ERGPVLVTGATGGVGSLAVSMLAKRGYTVEAS-TGKAAEHDYLRVLGAKEVL---AREDV 204

Query: 242 QAAMG------TMDGIIDTVSAVHPLMPLIGLLKSQGKLV---LVGAPEKPLELPA---- 288
            A              +D V     L  ++  ++  G +    L G      E+P     
Sbjct: 205 MAERIRPLDKQRWAAAVDPVGG-RTLATVLSRMRYGGAVAVSGLTGGA----EVPTTVHP 259

Query: 289 FSLLMGRKIVG-GSMIGGMKETQEMIDFAAKH---NIRADIEVIPADYVNTALERLAKAD 344
           F +L G  ++G  S+   M     + +  A     ++    + I    +  AL+R+ + +
Sbjct: 260 F-ILRGVSLLGIDSVYCPMDLRLRIWERLAGDLKPDLERIAQEISLAELPQALKRILRGE 318

Query: 345 VRYRFVIDVA 354
           +R R V+ +A
Sbjct: 319 LRGRTVVRLA 328

>2vz8_A Fatty acid synthase; transferase, phosphopantetheine, multienzyme, megasynthase, fatty acid synthesis; 3.2A {Sus scrofa} PDB: 2vz9_A* Length = 2512

 Score = 53.7 bits (129), Expect = 6e-08
 Identities = 34/175 (19%), Positives = 54/175 (30%), Gaps = 39/175 (22%)

Query: 69   VPGHEIVGVVTEVGSKVSKFKVGDKVGVGCMVGSCRSCDSCAIDLENYCPKVIMTYANKY 128
            +PG  +            +   G +V                           M      
Sbjct: 1588 IPGKWLTRDCMLGMEFSGRDASGRRV---------------------------M------ 1614

Query: 129  HDGTITYGGYSDIMVADEHFVVRIPEGTPLDATAPLLCAGITVYSPLRFYGLDKPGMHVG 188
              G +   G +  ++  +H    +P    L+  A +     T Y  L   G  +PG  V 
Sbjct: 1615 --GMVPAEGLATSVLLLQHATWEVPSTWTLEEAASVPIVYTTAYYSLVVRGRMQPGESVL 1672

Query: 189  V-VGLGGLGHVAVKFAKAMGVKVTVISTSPSKKSEAIER---LGADSFLVSRDQD 239
            +  G GG+G  A+  A + G +V     S  K++    R   L    F  SRD  
Sbjct: 1673 IHSGSGGVGQAAIAIALSRGCRVFTTVGSAEKRAYLQARFPQLDETCFANSRDTS 1727

>3d4o_A Dipicolinate synthase subunit A; NP_243269.1, structural GEN joint center for structural genomics, JCSG, protein structu initiative, PSI-2; HET: MSE TAR; 2.10A {Bacillus halodurans} Length = 293

 Score = 50.3 bits (120), Expect = 3e-07
 Identities = 18/73 (24%), Positives = 32/73 (43%), Gaps = 5/73 (6%)

Query: 183 PGMHVGVVGLGGLGHVAVKFAKAMGVKVTVISTSPSKKSEAIERLGADSFLVSRDQDEMQ 242
            G +V V+GLG +G    +   A+G KV V +      +   E +G + F       +  
Sbjct: 154 HGANVAVLGLGRVGMSVARKFAALGAKVKVGARESDLLARIAE-MGMEPF----HISKAA 208

Query: 243 AAMGTMDGIIDTV 255
             +  +D  I+T+
Sbjct: 209 QELRDVDVCINTI 221

>1vt4_I APAF-1 related killer DARK; drosophila apoptosome, apoptosis, programmed cell death; HET: DTP; 6.90A {Drosophila melanogaster} PDB: 3iz8_A* Length = 1221

 Score = 49.9 bits (118), Expect = 8e-07
 Identities = 48/326 (14%), Positives = 87/326 (26%), Gaps = 119/326 (36%)

Query: 110 AIDLENYCPKVIMTYANKYHDGTITYGGYSDIMVADEHFVVRIPEGTPLDATAPLLCAGI 169
            I  E   P ++     +  D       Y+D  V  ++ V R+                 
Sbjct: 97  PIKTEQRQPSMMTRMYIEQRDRL-----YNDNQVFAKYNVSRLQP--------------- 136

Query: 170 TVYSPLR--FYGLDKPGMHVGVVGLGGLG-HVAV-------KFAKAMGVKV---TV---- 212
             Y  LR     L +P  +V + G+ G G            K    M  K+    +    
Sbjct: 137 --YLKLRQALLEL-RPAKNVLIDGVLGSGKTWVALDVCLSYKVQCKMDFKIFWLNLKNCN 193

Query: 213 --------------------------ISTSPSKKSEAIERL--------GADSFLVSRD- 237
                                      S    +       L          +  LV  + 
Sbjct: 194 SPETVLEMLQKLLYQIDPNWTSRSDHSSNIKLRIHSIQAELRRLLKSKPYENCLLVLLNV 253

Query: 238 QD-EMQAAMG--------TMD-GIIDTVSA---VHPLM--PLIGLLKSQGKLVL---VGA 279
           Q+ +   A          T    + D +SA    H  +    + L   + K +L   +  
Sbjct: 254 QNAKAWNAFNLSCKILLTTRFKQVTDFLSAATTTHISLDHHSMTLTPDEVKSLLLKYLD- 312

Query: 280 PEKPLELPAFSLLMGRKIVGG-----SMIGGM-KETQEMIDFAAKHNIRADIEVIPADYV 333
             +P +LP       R+++       S+I    ++     D     N      +I     
Sbjct: 313 -CRPQDLP-------REVLTTNPRRLSIIAESIRDGLATWDNWKHVNCDKLTTII----- 359

Query: 334 NTALERLAKADVR--YR-FVI---DV 353
            ++L  L  A+ R  +    +     
Sbjct: 360 ESSLNVLEPAEYRKMFDRLSVFPPSA 385

>1pqw_A Polyketide synthase; rossmann fold, dimer, structural genomics, PSI, protein STRU initiative; 2.66A {Mycobacterium tuberculosis} SCOP: c.2.1.1 Length = 198

 Score = 46.0 bits (110), Expect = 4e-06
 Identities = 30/110 (27%), Positives = 46/110 (41%), Gaps = 12/110 (10%)

Query: 147 HFVVRIPEGTPLDATAPLLCAGITVYSPLRFYGLD-----KPGMHVGV-VGLGGLGHVAV 200
             VV IP+    +  A    A +T +     + L       PG  V +    GG+G  AV
Sbjct: 2   DLVVPIPDTLADNEAATFGVAYLTAW-----HSLCEVGRLSPGERVLIHSATGGVGMAAV 56

Query: 201 KFAKAMGVKVTVISTSPSKKSEAIERLGADSFLVSRDQDEMQAAMGTMDG 250
             AK +G ++   + S +K+ E + RLG +    SR  D     +   DG
Sbjct: 57  SIAKMIGARIYTTAGSDAKR-EMLSRLGVEYVGDSRSVDFADEILELTDG 105

>3hg7_A D-isomer specific 2-hydroxyacid dehydrogenase FAM protein; structural genomics; 1.80A {Aeromonas salmonicida subsp} Length = 324

 Score = 41.9 bits (99), Expect = 2e-04
 Identities = 10/47 (21%), Positives = 20/47 (42%)

Query: 184 GMHVGVVGLGGLGHVAVKFAKAMGVKVTVISTSPSKKSEAIERLGAD 230
           G  + ++G G +G       K  G+KV  +S S  +++   +     
Sbjct: 140 GRTLLILGTGSIGQHIAHTGKHFGMKVLGVSRSGRERAGFDQVYQLP 186

>1leh_A Leucine dehydrogenase; oxidoreductase; 2.20A {Lysinibacillus sphaericus} SCOP: c.2.1.7 c.58.1.1 Length = 364

 Score = 42.1 bits (100), Expect = 2e-04
 Identities = 26/101 (25%), Positives = 37/101 (36%), Gaps = 8/101 (7%)

Query: 138 YSDIM--VADE-HFVVRIPE-----GTPLDATAPLLCAGITVYSPLRFYGLDKPGMHVGV 189
             D M  +  E  +V  I       G P   TA  +  G+   +   F      G+ V V
Sbjct: 119 TVDDMDLIHQETDYVTGISPAFGSSGNPSPVTAYGVYRGMKAAAKEAFGSDSLEGLAVSV 178

Query: 190 VGLGGLGHVAVKFAKAMGVKVTVISTSPSKKSEAIERLGAD 230
            GLG +     K     G K+ V   + +  S A+   GAD
Sbjct: 179 QGLGNVAKALCKKLNTEGAKLVVTDVNKAAVSAAVAEEGAD 219

>3pp8_A Glyoxylate/hydroxypyruvate reductase A; structural genomics, center for structural genomics of infec diseases, csgid; 2.10A {Salmonella enterica subsp} PDB: 3kbo_A Length = 315

 Score = 41.5 bits (98), Expect = 2e-04
 Identities = 13/50 (26%), Positives = 20/50 (40%), Gaps = 2/50 (4%)

Query: 184 GMHVGVVGLGGLGHVAVKFAKAMGVKVTVISTSPSKKSEAIERL-GADSF 232
              VG++G G LG    +  +A G  +   S S  K    +E   G +  
Sbjct: 139 EFSVGIMGAGVLGAKVAESLQAWGFPLRCWSRSR-KSWPGVESYVGREEL 187

>3e8x_A Putative NAD-dependent epimerase/dehydratase; structural genomics, APC7755, NADP, P protein structure initiative; HET: MSE NAP; 2.10A {Bacillus halodurans} Length = 236

 Score = 40.8 bits (96), Expect = 3e-04
 Identities = 16/79 (20%), Positives = 33/79 (41%), Gaps = 2/79 (2%)

Query: 180 LDKPGMHVGVVG-LGGLGHVAVKFAKAMGVKVTVISTSPSKKSEAIERLGADSFLVSRDQ 238
           L   GM V VVG  G +    +   K  G +   +  +  +  E +   GA   +V+  +
Sbjct: 17  LYFQGMRVLVVGANGKVARYLLSELKNKGHEPVAMVRNEEQGPE-LRERGASDIVVANLE 75

Query: 239 DEMQAAMGTMDGIIDTVSA 257
           ++   A  ++D ++    +
Sbjct: 76  EDFSHAFASIDAVVFAAGS 94

>2dbq_A Glyoxylate reductase; D-3-phosphoglycerate dehydrogenase, ST genomics, NPPSFA; HET: NAP; 1.70A {Pyrococcus horikoshii} PDB: 2dbr_A* 2dbz_A* Length = 334

 Score = 41.0 bits (97), Expect = 4e-04
 Identities = 18/61 (29%), Positives = 29/61 (47%), Gaps = 2/61 (3%)

Query: 169 ITVYSPLRFYGLDKPGMHVGVVGLGGLGHVAVKFAKAMGVKVTVISTSPSKKSEAIERLG 228
              + P  F G D  G  +G++GLG +G    K AK   ++  ++  S ++K E    L 
Sbjct: 135 GVAWHPKWFLGYDVYGKTIGIIGLGRIGQAIAKRAKGFNMR--ILYYSRTRKEEVERELN 192

Query: 229 A 229
           A
Sbjct: 193 A 193

>3evt_A Phosphoglycerate dehydrogenase; structural genomics, PSI-2, protein structure initiative; 2.20A {Lactobacillus plantarum} Length = 324

 Score = 40.7 bits (96), Expect = 4e-04
 Identities = 10/49 (20%), Positives = 20/49 (40%)

Query: 184 GMHVGVVGLGGLGHVAVKFAKAMGVKVTVISTSPSKKSEAIERLGADSF 232
           G  + + G G +G      A A+G+ V  ++T+        E +   + 
Sbjct: 137 GQQLLIYGTGQIGQSLAAKASALGMHVIGVNTTGHPADHFHETVAFTAT 185

>1xea_A Oxidoreductase, GFO/IDH/MOCA family; structural genomics, protein structure initiative, NYSGXRC, VCA1048, GFO/IDH/MOCA family oxidoreductase; 2.65A {Vibrio cholerae} SCOP: c.2.1.3 d.81.1.5 Length = 323

 Score = 40.5 bits (95), Expect = 4e-04
 Identities = 23/145 (15%), Positives = 46/145 (31%), Gaps = 38/145 (26%)

Query: 185 MHVGVVGLGGLG--HVAVKFAKAMGVKVTVISTSPSKKSEAIERLGADSFLVSRDQDEMQ 242
           + + ++GLG +         A+   +++ + + +P        R    +     D  ++ 
Sbjct: 3   LKIAMIGLGDIAQKAYLPVLAQWPDIELVLCTRNPKVLGTLATRYRVSA--TCTDYRDV- 59

Query: 243 AAMGTMDGIIDTVS-----AVHPLMPLIGLLKSQGKLVLVGAPEKPLELPAFSLLMGRKI 297
                +   +D V       VH    L       G    V   +KPL   A S       
Sbjct: 60  -----LQYGVDAVMIHAATDVHS--TLAAFFLHLGIPTFV---DKPL---AASA------ 100

Query: 298 VGGSMIGGMKETQEMIDFAAKHNIR 322
                    +E + + + A KH+  
Sbjct: 101 ---------QECENLYELAEKHHQP 116

>2rir_A Dipicolinate synthase, A chain; structural genomics, APC1343, PSI-2, structure initiative; HET: MSE NAP; 2.79A {Bacillus subtilis} Length = 300

 Score = 40.2 bits (94), Expect = 6e-04
 Identities = 18/75 (24%), Positives = 31/75 (41%), Gaps = 5/75 (6%)

Query: 183 PGMHVGVVGLGGLGHVAVKFAKAMGVKVTVISTSPSKKSEAIERLGADSFLVSRDQDEMQ 242
            G  V V+GLG  G    +   A+G  V V + S +  +   E             DE++
Sbjct: 156 HGSQVAVLGLGRTGMTIARTFAALGANVKVGARSSAHLARITEMGLVPFHT-----DELK 210

Query: 243 AAMGTMDGIIDTVSA 257
             +  +D  I+T+ +
Sbjct: 211 EHVKDIDICINTIPS 225

Structure Templates Detected by HHsearch

Original result of HHsearch against PDB70 database

ID	Length	Definition	Probability
Query	361
2cf5_A	357	Atccad5, CAD, cinnamyl alcohol dehydrogenase; lign	100.0
1yqd_A	366	Sinapyl alcohol dehydrogenase; lignin, monolignol,	100.0
3two_A	348	Mannitol dehydrogenase; cinnamyl-alcohol dehydroge	100.0
1uuf_A	369	YAHK, zinc-type alcohol dehydrogenase-like protein	100.0
3s2e_A	340	Zinc-containing alcohol dehydrogenase superfamily;	100.0
1piw_A	360	Hypothetical zinc-type alcohol dehydrogenase- like	100.0
1rjw_A	339	ADH-HT, alcohol dehydrogenase; oxidoreductase, NAD	100.0
1h2b_A	359	Alcohol dehydrogenase; oxidoreductase, archaea, hy	100.0
4eez_A	348	Alcohol dehydrogenase 1; site-saturation mutagenes	100.0
3uko_A	378	Alcohol dehydrogenase class-3; alcohol dehydrogena	100.0
3jv7_A	345	ADH-A; dehydrogenase, nucleotide binding, rossmann	100.0
2h6e_A	344	ADH-4, D-arabinose 1-dehydrogenase; rossman fold,	100.0
1e3i_A	376	Alcohol dehydrogenase, class II; HET: NAD; 2.08A {	100.0
2hcy_A	347	Alcohol dehydrogenase 1; tetramer of asymmetric di	100.0
1p0f_A	373	NADP-dependent alcohol dehydrogenase; ADH topology	100.0
4ej6_A	370	Putative zinc-binding dehydrogenase; structural ge	100.0
2fzw_A	373	Alcohol dehydrogenase class III CHI chain; S-nitro	100.0
2eih_A	343	Alcohol dehydrogenase; zinc ION binding protein, s	100.0
1f8f_A	371	Benzyl alcohol dehydrogenase; rossmann fold, oxido	100.0
1cdo_A	374	Alcohol dehydrogenase; oxidoreductase, oxidoreduct	100.0
2jhf_A	374	Alcohol dehydrogenase E chain; oxidoreductase, met	100.0
2d8a_A	348	PH0655, probable L-threonine 3-dehydrogenase; pyro	100.0
2dq4_A	343	L-threonine 3-dehydrogenase; NAD-dependent, oxidor	100.0
1jvb_A	347	NAD(H)-dependent alcohol dehydrogenase; archaeon,	100.0
1e3j_A	352	NADP(H)-dependent ketose reductase; oxidoreductase	100.0
1pl8_A	356	Human sorbitol dehydrogenase; NAD, oxidoreductase;	100.0
4a2c_A	346	Galactitol-1-phosphate 5-dehydrogenase; oxidoreduc	100.0
3uog_A	363	Alcohol dehydrogenase; structural genomics, protei	100.0
3m6i_A	363	L-arabinitol 4-dehydrogenase; medium chain dehydro	100.0
1vj0_A	380	Alcohol dehydrogenase, zinc-containing; TM0436, st	100.0
3fpc_A	352	NADP-dependent alcohol dehydrogenase; oxydoreducta	100.0
3ip1_A	404	Alcohol dehydrogenase, zinc-containing; structural	100.0
2dph_A	398	Formaldehyde dismutase; dismutation of aldehydes,	100.0
1kol_A	398	Formaldehyde dehydrogenase; oxidoreductase; HET: N	100.0
2b5w_A	357	Glucose dehydrogenase; nucleotide binding motif, o	100.0
3krt_A	456	Crotonyl COA reductase; structural genomics, prote	100.0
4dup_A	353	Quinone oxidoreductase; PSI-biology, structural ge	100.0
4a0s_A	447	Octenoyl-COA reductase/carboxylase; oxidoreductase	100.0
3qwb_A	334	Probable quinone oxidoreductase; rossmann fold, qu	100.0
4eye_A	342	Probable oxidoreductase; structural genomics, niai	100.0
3tqh_A	321	Quinone oxidoreductase; HET: NDP; 2.44A {Coxiella	100.0
2cdc_A	366	Glucose dehydrogenase glucose 1-dehydrogenase, DHG	100.0
3fbg_A	346	Putative arginate lyase; structural genomics, unkn	100.0
3jyn_A	325	Quinone oxidoreductase; rossmann fold, protein-NAD	100.0
4dvj_A	363	Putative zinc-dependent alcohol dehydrogenase Pro;	100.0
1zsy_A	357	Mitochondrial 2-enoyl thioester reductase; medium-	100.0
3goh_A	315	Alcohol dehydrogenase, zinc-containing; NP_718042.	100.0
3pi7_A	349	NADH oxidoreductase; groes-like fold, NAD(P)-bindi	100.0
4a27_A	349	Synaptic vesicle membrane protein VAT-1 homolog-L;	100.0
3gms_A	340	Putative NADPH:quinone reductase; structural genom	100.0
2j8z_A	354	Quinone oxidoreductase; medium-chain dehydrogenase	100.0
1yb5_A	351	Quinone oxidoreductase; medium-chain dehydrogenase	100.0
1wly_A	333	CAAR, 2-haloacrylate reductase; NADPH-dependent ox	100.0
3nx4_A	324	Putative oxidoreductase; csgid, structural genomic	100.0
3gqv_A	371	Enoyl reductase; medium-chain reductase (MDR super	100.0
3gaz_A	343	Alcohol dehydrogenase superfamily protein; oxidore	100.0
1gu7_A	364	Enoyl-[acyl-carrier-protein] reductase [NADPH, B-s	100.0
1qor_A	327	Quinone oxidoreductase; HET: NAP; 2.20A {Escherich	100.0
2vn8_A	375	Reticulon-4-interacting protein 1; mitochondrion,	100.0
2c0c_A	362	Zinc binding alcohol dehydrogenase, domain contain	100.0
4b7c_A	336	Probable oxidoreductase; NADP cofactor, rossmann f	100.0
1xa0_A	328	Putative NADPH dependent oxidoreductases; structur	100.0
1tt7_A	330	YHFP; alcohol dehydrogenase, Zn-dependent, NAD, st	100.0
2zb4_A	357	Prostaglandin reductase 2; rossmann fold, alternat	100.0
1iz0_A	302	Quinone oxidoreductase; APO-enzyme, riken structur	100.0
3iup_A	379	Putative NADPH:quinone oxidoreductase; YP_296108.1	100.0
2j3h_A	345	NADP-dependent oxidoreductase P1; double bond redu	100.0
1v3u_A	333	Leukotriene B4 12- hydroxydehydrogenase/prostaglan	100.0
3slk_A	795	Polyketide synthase extender module 2; rossmann fo	100.0
2vz8_A	2512	Fatty acid synthase; transferase, phosphopantethei	100.0
1pqw_A	198	Polyketide synthase; rossmann fold, dimer, structu	99.86
1gpj_A	404	Glutamyl-tRNA reductase; tRNA-dependent tetrapyrro	99.15
2yvl_A	248	TRMI protein, hypothetical protein; tRNA, methyltr	99.1
1pjc_A	361	Protein (L-alanine dehydrogenase); oxidoreductase,	99.04
2eez_A	369	Alanine dehydrogenase; TTHA0216, structural genomi	99.04
2vhw_A	377	Alanine dehydrogenase; NAD, secreted, oxidoreducta	99.02
1l7d_A	384	Nicotinamide nucleotide transhydrogenase, subunit	99.0
3ce6_A	494	Adenosylhomocysteinase; protein-substrate complex,	98.88
1x13_A	401	NAD(P) transhydrogenase subunit alpha; NAD(H)-bind	98.85
3oj0_A	144	Glutr, glutamyl-tRNA reductase; structural genomic	98.63
4dio_A	405	NAD(P) transhydrogenase subunit alpha PART 1; stru	98.54
3p2y_A	381	Alanine dehydrogenase/pyridine nucleotide transhy;	98.46
3d4o_A	293	Dipicolinate synthase subunit A; NP_243269.1, stru	98.29
3ic5_A	118	Putative saccharopine dehydrogenase; structural ge	98.26
4fgs_A	273	Probable dehydrogenase protein; PSI-biology, nysgr	98.2
3gvp_A	435	Adenosylhomocysteinase 3; protein CO-factor comple	98.17
2g1u_A	155	Hypothetical protein TM1088A; structural genomics,	98.17
3c85_A	183	Putative glutathione-regulated potassium-efflux S	98.09
2rir_A	300	Dipicolinate synthase, A chain; structural genomic	98.08
1p91_A	269	Ribosomal RNA large subunit methyltransferase A; R	98.06
3n58_A	464	Adenosylhomocysteinase; ssgcid, hydrolase, structu	97.98
1o54_A	277	SAM-dependent O-methyltransferase; TM0748, structu	97.94
3h9u_A	436	Adenosylhomocysteinase; NAD CO-factor complex, str	97.91
3ond_A	488	Adenosylhomocysteinase; plant protein, enzyme-subs	97.9
4eso_A	255	Putative oxidoreductase; NADP, structural genomics	97.87
3fpf_A	298	Mtnas, putative uncharacterized protein; thermonic	97.83
4e6p_A	259	Probable sorbitol dehydrogenase (L-iditol 2-dehyd;	97.74
4dyv_A	272	Short-chain dehydrogenase/reductase SDR; structura	97.73
4fs3_A	256	Enoyl-[acyl-carrier-protein] reductase [NADPH] FA;	97.72
3ged_A	247	Short-chain dehydrogenase/reductase SDR; SCOR, ros	97.72
4fn4_A	254	Short chain dehydrogenase; NADH-binding, rossmann	97.71
3grp_A	266	3-oxoacyl-(acyl carrierprotein) reductase; structu	97.71
4dqx_A	277	Probable oxidoreductase protein; structural genomi	97.7
4g81_D	255	Putative hexonate dehydrogenase; enzyme function i	97.68
2wsb_A	254	Galactitol dehydrogenase; oxidoreductase, SDR, ros	97.68
4b79_A	242	PA4098, probable short-chain dehydrogenase; oxidor	97.66
3fwz_A	140	Inner membrane protein YBAL; TRKA-N domain, E.coli	97.66
3op4_A	248	3-oxoacyl-[acyl-carrier protein] reductase; 3-keto	97.65
3gvc_A	277	Oxidoreductase, probable short-chain type dehydrog	97.65
2a4k_A	263	3-oxoacyl-[acyl carrier protein] reductase; reduct	97.63
4dry_A	281	3-oxoacyl-[acyl-carrier-protein] reductase; struct	97.63
3dii_A	247	Short-chain dehydrogenase/reductase SDR; SCOR, ros	97.62
3m1a_A	281	Putative dehydrogenase; short, PSI, MCSG, structur	97.62
2ew8_A	249	(S)-1-phenylethanol dehydrogenase; transferase; 2.	97.58
3f9i_A	249	3-oxoacyl-[acyl-carrier-protein] reductase; 3-keto	97.57
2hmt_A	144	YUAA protein; RCK, KTN, KTR, KTRA, ktrab, membrane	97.57
1iy8_A	267	Levodione reductase; oxidoreductase; HET: NAD; 1.6	97.56
3e8x_A	236	Putative NAD-dependent epimerase/dehydratase; stru	97.56
3tfo_A	264	Putative 3-oxoacyl-(acyl-carrier-protein) reducta;	97.56
2egg_A	297	AROE, shikimate 5-dehydrogenase; dimer, X-RAY diff	97.55
3r6d_A	221	NAD-dependent epimerase/dehydratase; structural ge	97.55
3ijr_A	291	Oxidoreductase, short chain dehydrogenase/reducta;	97.54
3llv_A	141	Exopolyphosphatase-related protein; NAD(P)-binding	97.53
1lss_A	140	TRK system potassium uptake protein TRKA homolog;	97.52
3l6e_A	235	Oxidoreductase, short-chain dehydrogenase/reducta;	97.52
3tjr_A	301	Short chain dehydrogenase; structural genomics, se	97.52
1xg5_A	279	ARPG836; short chain dehydrogenase, human, SGC, st	97.51
3tnl_A	315	Shikimate dehydrogenase; structural genomics, cent	97.5
1nyt_A	271	Shikimate 5-dehydrogenase; alpha/beta domains, WID	97.5
3v2g_A	271	3-oxoacyl-[acyl-carrier-protein] reductase; struct	97.5
3gem_A	260	Short chain dehydrogenase; structural genomics, AP	97.49
3f1l_A	252	Uncharacterized oxidoreductase YCIK; E. coli, NADP	97.49
2z1n_A	260	Dehydrogenase; reductase, SDR, oxidoreductase; 1.8	97.49
2gdz_A	267	NAD+-dependent 15-hydroxyprostaglandin dehydrogen;	97.49
1i9g_A	280	Hypothetical protein RV2118C; mtase, adoMet, cryst	97.49
1wma_A	276	Carbonyl reductase [NADPH] 1; oxidoreductase; HET:	97.48
1spx_A	278	Short-chain reductase family member (5L265); paral	97.48
1geg_A	256	Acetoin reductase; SDR family, oxidoreductase; HET	97.47
1hxh_A	253	3BETA/17BETA-hydroxysteroid dehydrogenase; alpha-b	97.47
3rwb_A	247	TPLDH, pyridoxal 4-dehydrogenase; short chain dehy	97.47
2b25_A	336	Hypothetical protein; structural genomics, methyl	97.47
1zem_A	262	Xylitol dehydrogenase; rossmann fold, dinucleotide	97.47
1x1t_A	260	D(-)-3-hydroxybutyrate dehydrogenase; NAD, NADH, S	97.46
3d3w_A	244	L-xylulose reductase; uronate cycle, short-chain d	97.46
1lu9_A	287	Methylene tetrahydromethanopterin dehydrogenase; a	97.45
3oig_A	266	Enoyl-[acyl-carrier-protein] reductase [NADH]; fat	97.45
2uvd_A	246	3-oxoacyl-(acyl-carrier-protein) reductase; beta-k	97.44
2bgk_A	278	Rhizome secoisolariciresinol dehydrogenase; oxidor	97.44
1hdc_A	254	3-alpha, 20 beta-hydroxysteroid dehydrogenase; oxi	97.44
3abi_A	365	Putative uncharacterized protein PH1688; L-lysine	97.43
3l07_A	285	Bifunctional protein fold; structural genomics, ID	97.43
3k31_A	296	Enoyl-(acyl-carrier-protein) reductase; ssgcid, NI	97.42
3ftp_A	270	3-oxoacyl-[acyl-carrier protein] reductase; ssgcid	97.42
2ehd_A	234	Oxidoreductase, oxidoreductase, short-chain dehydr	97.41
3pxx_A	287	Carveol dehydrogenase; structural genomics, seattl	97.41
1uls_A	245	Putative 3-oxoacyl-acyl carrier protein reductase;	97.41
4hp8_A	247	2-deoxy-D-gluconate 3-dehydrogenase; enzyme functi	97.41
2o23_A	265	HADH2 protein; HSD17B10, schad, ERAB, type II HADH	97.4
3tzq_B	271	Short-chain type dehydrogenase/reductase; ssgcid,	97.4
1c1d_A	355	L-phenylalanine dehydrogenase; amino acid dehydrog	97.4
1edz_A	320	5,10-methylenetetrahydrofolate dehydrogenase; nucl	97.4
3edm_A	259	Short chain dehydrogenase; structural genomics, ox	97.4
3o26_A	311	Salutaridine reductase; short chain dehydrogenase/	97.39
3p2o_A	285	Bifunctional protein fold; structural genomics, ce	97.39
3r3s_A	294	Oxidoreductase; structural genomics, csgid, center	97.38
1yb1_A	272	17-beta-hydroxysteroid dehydrogenase type XI; shor	97.37
1ja9_A	274	4HNR, 1,3,6,8-tetrahydroxynaphthalene reductase; p	97.37
3n74_A	261	3-ketoacyl-(acyl-carrier-protein) reductase; seatt	97.37
3rkr_A	262	Short chain oxidoreductase; rossmann fold; HET: NA	97.36
3grk_A	293	Enoyl-(acyl-carrier-protein) reductase (NADH); ssg	97.36
1vl8_A	267	Gluconate 5-dehydrogenase; TM0441, structural geno	97.36
1fmc_A	255	7 alpha-hydroxysteroid dehydrogenase; short-chain	97.36
3t4x_A	267	Oxidoreductase, short chain dehydrogenase/reducta;	97.35
3ai3_A	263	NADPH-sorbose reductase; rossmann-fold, NADPH-depe	97.35
1a4i_A	301	Methylenetetrahydrofolate dehydrogenase / methenyl	97.35
3u5t_A	267	3-oxoacyl-[acyl-carrier-protein] reductase; struct	97.34
3mb5_A	255	SAM-dependent methyltransferase; RNA methyltransfe	97.34
3ew7_A	221	LMO0794 protein; Q8Y8U8_lismo, putative NAD-depend	97.34
4egf_A	266	L-xylulose reductase; structural genomics, ssgcid,	97.34
1nff_A	260	Putative oxidoreductase RV2002; directed evolution	97.34
4imr_A	275	3-oxoacyl-(acyl-carrier-protein) reductase; oxidor	97.33
4a26_A	300	Putative C-1-tetrahydrofolate synthase, cytoplasm;	97.33
2c07_A	285	3-oxoacyl-(acyl-carrier protein) reductase; oxidor	97.33
1gee_A	261	Glucose 1-dehydrogenase; short-chain dehydrogenase	97.32
1g0o_A	283	Trihydroxynaphthalene reductase; protein-NADPH-act	97.32
3rd5_A	291	Mypaa.01249.C; ssgcid, structural genomics, seattl	97.32
1ae1_A	273	Tropinone reductase-I; oxidoreductase, tropane alk	97.32
3ioy_A	319	Short-chain dehydrogenase/reductase SDR; structura	97.31
3ak4_A	263	NADH-dependent quinuclidinone reductase; SDR, (R)-	97.3
3tpc_A	257	Short chain alcohol dehydrogenase-related dehydro;	97.3
2ae2_A	260	Protein (tropinone reductase-II); oxidoreductase,	97.3
3l77_A	235	Short-chain alcohol dehydrogenase; oxidoreductase;	97.3
3ngx_A	276	Bifunctional protein fold; methylenetetrahydrofola	97.3
1b0a_A	288	Protein (fold bifunctional protein); folate, dehyd	97.3
2h7i_A	269	Enoyl-[acyl-carrier-protein] reductase [NADH]; oxi	97.29
4a5o_A	286	Bifunctional protein fold; oxidoreductase, hydrola	97.29
1zk4_A	251	R-specific alcohol dehydrogenase; short chain redu	97.29
3pgx_A	280	Carveol dehydrogenase; structural genomics, seattl	97.28
1cyd_A	244	Carbonyl reductase; short-chain dehydrogenase, oxi	97.28
4gkb_A	258	3-oxoacyl-[acyl-carrier protein] reductase; putati	97.27
2q2v_A	255	Beta-D-hydroxybutyrate dehydrogenase; SDR, oxidore	97.27
2jah_A	247	Clavulanic acid dehydrogenase; short-chain dehydro	97.27
3kvo_A	346	Hydroxysteroid dehydrogenase-like protein 2; HSDL2	97.26
3dqp_A	219	Oxidoreductase YLBE; alpha-beta protein., structur	97.25
2wyu_A	261	Enoyl-[acyl carrier protein] reductase; oxidoreduc	97.25
3h7a_A	252	Short chain dehydrogenase; oxidoreductase, PSI-2,	97.25
3imf_A	257	Short chain dehydrogenase; structural genomics, in	97.24
3qvo_A	236	NMRA family protein; structural genomics, PSI-biol	97.24
3zv4_A	281	CIS-2,3-dihydrobiphenyl-2,3-DIOL dehydrogenase; ox	97.24
1qsg_A	265	Enoyl-[acyl-carrier-protein] reductase; enoyl redu	97.24
3ksu_A	262	3-oxoacyl-acyl carrier protein reductase; structur	97.23
1yde_A	270	Retinal dehydrogenase/reductase 3; oxidoreductase,	97.23
3kzv_A	254	Uncharacterized oxidoreductase YIR035C; cytoplasmi	97.23
2pd4_A	275	Enoyl-[acyl-carrier-protein] reductase [NADH]; ant	97.23
2rhc_B	277	Actinorhodin polyketide ketoreductase; oxidoreduct	97.22
3r1i_A	276	Short-chain type dehydrogenase/reductase; structur	97.22
3t4e_A	312	Quinate/shikimate dehydrogenase; structural genomi	97.22
3qiv_A	253	Short-chain dehydrogenase or 3-oxoacyl-[acyl-CARR	97.2
2ph3_A	245	3-oxoacyl-[acyl carrier protein] reductase; TTHA04	97.2
3njr_A	204	Precorrin-6Y methylase; methyltransferase, decarbo	97.2
1hdo_A	206	Biliverdin IX beta reductase; foetal metabolism, H	97.2
2z2v_A	365	Hypothetical protein PH1688; L-lysine dehydrogenas	97.19
3is3_A	270	17BETA-hydroxysteroid dehydrogenase; short chain d	97.18
3rku_A	287	Oxidoreductase YMR226C; substrate fingerprint, sho	97.18
2bka_A	242	CC3, TAT-interacting protein TIP30; NADPH, PEG600,	97.17
2x9g_A	288	PTR1, pteridine reductase; short chain dehydrogena	97.17
3oid_A	258	Enoyl-[acyl-carrier-protein] reductase [NADPH]; fa	97.17
2axq_A	467	Saccharopine dehydrogenase; rossmann fold variant,	97.17
2nwq_A	272	Probable short-chain dehydrogenase; oxidoreductase	97.17
3sc4_A	285	Short chain dehydrogenase (A0QTM2 homolog); ssgcid	97.16
4dmm_A	269	3-oxoacyl-[acyl-carrier-protein] reductase; rossma	97.16
3pk0_A	262	Short-chain dehydrogenase/reductase SDR; ssgcid, s	97.15
3rih_A	293	Short chain dehydrogenase or reductase; structural	97.15
3v8b_A	283	Putative dehydrogenase, possibly 3-oxoacyl-[acyl-	97.15
3sx2_A	278	Putative 3-ketoacyl-(acyl-carrier-protein) reduct;	97.15
3d64_A	494	Adenosylhomocysteinase; structural genomics, ssgci	97.14
3pwz_A	272	Shikimate dehydrogenase 3; alpha-beta, oxidoreduct	97.14
3h2s_A	224	Putative NADH-flavin reductase; Q03B84, NESG, LCR1	97.13
3tsc_A	277	Putative oxidoreductase; structural genomics, seat	97.13
2c2x_A	281	Methylenetetrahydrofolate dehydrogenase- methenylt	97.12
3e48_A	289	Putative nucleoside-diphosphate-sugar epimerase; a	97.12
3nyw_A	250	Putative oxidoreductase; fatty acid synthesis,3-ox	97.12
1leh_A	364	Leucine dehydrogenase; oxidoreductase; 2.20A {Lysi	97.11
1v8b_A	479	Adenosylhomocysteinase; hydrolase; HET: NAD ADN; 2	97.11
4fc7_A	277	Peroxisomal 2,4-dienoyl-COA reductase; SDR/rossman	97.11
3uce_A	223	Dehydrogenase; rossmann fold, oxidoreductase; HET:	97.1
2pnf_A	248	3-oxoacyl-[acyl-carrier-protein] reductase; short	97.1
4df3_A	233	Fibrillarin-like rRNA/TRNA 2'-O-methyltransferase;	97.1
3e03_A	274	Short chain dehydrogenase; structural genomics, PS	97.1
3phh_A	269	Shikimate dehydrogenase; shikimate pathway, helico	97.1
3orf_A	251	Dihydropteridine reductase; alpha-beta-alpha sandw	97.1
3dfz_A	223	SIRC, precorrin-2 dehydrogenase; NAD dehydrogenase	97.09
1sby_A	254	Alcohol dehydrogenase; ternary complex, NAD, trifl	97.09
1ff9_A	450	Saccharopine reductase; lysine biosynthesis, alpha	97.09
2b4q_A	276	Rhamnolipids biosynthesis 3-oxoacyl-[acyl- carrier	97.09
2p91_A	285	Enoyl-[acyl-carrier-protein] reductase [NADH]; NAD	97.09
2d1y_A	256	Hypothetical protein TT0321; strucrtural genomics,	97.09
3awd_A	260	GOX2181, putative polyol dehydrogenase; oxidoreduc	97.08
3gaf_A	256	7-alpha-hydroxysteroid dehydrogenase; seattle stru	97.07
3svt_A	281	Short-chain type dehydrogenase/reductase; ssgcid,	97.06
2zat_A	260	Dehydrogenase/reductase SDR family member 4; alpha	97.06
2gn4_A	344	FLAA1 protein, UDP-GLCNAC C6 dehydratase; rossmann	97.06
3tox_A	280	Short chain dehydrogenase; structural genomics, PS	97.05
3lf2_A	265	Short chain oxidoreductase Q9HYA2; SDR, SCOR, ross	97.05
3dhn_A	227	NAD-dependent epimerase/dehydratase; reductase, PF	97.05
3guy_A	230	Short-chain dehydrogenase/reductase SDR; structura	97.05
2yxe_A	215	Protein-L-isoaspartate O-methyltransferase; rossma	97.05
1mxh_A	276	Pteridine reductase 2; SDR topology, protein-subst	97.04
3ucx_A	264	Short chain dehydrogenase; ssgcid, seattle structu	97.04
2cfc_A	250	2-(R)-hydroxypropyl-COM dehydrogenase; NAD, oxidor	97.03
3hm2_A	178	Precorrin-6Y C5,15-methyltransferase; alpha-beta-s	97.03
1edo_A	244	Beta-keto acyl carrier protein reductase; nucleoti	97.03
3a28_C	258	L-2.3-butanediol dehydrogenase; chiral substrate r	97.03
3sju_A	279	Keto reductase; short-chain dehydrogenase, oxidore	97.02
1wwk_A	307	Phosphoglycerate dehydrogenase; riken structural g	97.02
4ibo_A	271	Gluconate dehydrogenase; enzyme function initiativ	97.02
1e7w_A	291	Pteridine reductase; dihydrofolate reductase, shor	97.01
1xq1_A	266	Putative tropinone reducatse; structural genomics,	97.01
3ppi_A	281	3-hydroxyacyl-COA dehydrogenase type-2; ssgcid, de	97.0
3afn_B	258	Carbonyl reductase; alpha/beta/alpha, rossmann-fol	96.99
3asu_A	248	Short-chain dehydrogenase/reductase SDR; SDR famil	96.99
3p19_A	266	BFPVVD8, putative blue fluorescent protein; rossma	96.98
1xkq_A	280	Short-chain reductase family member (5D234); parra	96.98
3jyo_A	283	Quinate/shikimate dehydrogenase; enzyme-cofactor c	96.97
3lbf_A	210	Protein-L-isoaspartate O-methyltransferase; modifi	96.96
3cxt_A	291	Dehydrogenase with different specificities; rossma	96.96
2dtx_A	264	Glucose 1-dehydrogenase related protein; rossmann	96.96
1xhl_A	297	Short-chain dehydrogenase/reductase family member	96.96
1id1_A	153	Putative potassium channel protein; RCK domain, E.	96.95
3ruf_A	351	WBGU; rossmann fold, UDP-hexose 4-epimerase, isome	96.95
3d7l_A	202	LIN1944 protein; APC89317, structural genomics, PS	96.94
3jtm_A	351	Formate dehydrogenase, mitochondrial; mitochondrio	96.94
3o8q_A	281	Shikimate 5-dehydrogenase I alpha; structural geno	96.94
3cea_A	346	MYO-inositol 2-dehydrogenase; NP_786804.1, oxidore	96.94
2d5c_A	263	AROE, shikimate 5-dehydrogenase; substrate, dimer,	96.94
3ctm_A	279	Carbonyl reductase; alcohol dehydrogenase, short-c	96.93
1xq6_A	253	Unknown protein; structural genomics, protein stru	96.91
2fwm_X	250	2,3-dihydro-2,3-dihydroxybenzoate dehydrogenase; e	96.9
3lyl_A	247	3-oxoacyl-(acyl-carrier-protein) reductase; alpha	96.89
1zmt_A	254	Haloalcohol dehalogenase HHEC; halohydrin dehaloge	96.89
2pbf_A	227	Protein-L-isoaspartate O-methyltransferase beta-A	96.88
2g76_A	335	3-PGDH, D-3-phosphoglycerate dehydrogenase; oxidor	96.88
2pd6_A	264	Estradiol 17-beta-dehydrogenase 8; short-chain deh	96.87
1y1p_A	342	ARII, aldehyde reductase II; rossmann fold, short	96.86
1jw9_B	249	Molybdopterin biosynthesis MOEB protein; MOEB: mod	96.86
1xu9_A	286	Corticosteroid 11-beta-dehydrogenase, isozyme 1; h	96.86
2ag5_A	246	DHRS6, dehydrogenase/reductase (SDR family) member	96.86
3icc_A	255	Putative 3-oxoacyl-(acyl carrier protein) reducta;	96.85
2j6i_A	364	Formate dehydrogenase; oxidoreductase, D-specific-	96.85
1w6u_A	302	2,4-dienoyl-COA reductase, mitochondrial precursor	96.84
1o5i_A	249	3-oxoacyl-(acyl carrier protein) reductase; TM1169	96.84
2zcu_A	286	Uncharacterized oxidoreductase YTFG; alpha-beta sa	96.83
2ekl_A	313	D-3-phosphoglycerate dehydrogenase; structural gen	96.83
4ina_A	405	Saccharopine dehydrogenase; structural genomics, P	96.82
2jl1_A	287	Triphenylmethane reductase; oxidoreductase, biorem	96.81
3i1j_A	247	Oxidoreductase, short chain dehydrogenase/reducta;	96.81
3l9w_A	413	Glutathione-regulated potassium-efflux system Pro	96.81
3ek2_A	271	Enoyl-(acyl-carrier-protein) reductase (NADH); ssg	96.81
1p77_A	272	Shikimate 5-dehydrogenase; NADPH, oxidoreductase;	96.8
1fjh_A	257	3alpha-hydroxysteroid dehydrogenase/carbonyl reduc	96.8
1omo_A	322	Alanine dehydrogenase; two-domain, beta-sandwich-d	96.8
1uzm_A	247	3-oxoacyl-[acyl-carrier protein] reductase; beta-k	96.8
3v2h_A	281	D-beta-hydroxybutyrate dehydrogenase; structural g	96.79
3l4b_C	218	TRKA K+ channel protien TM1088B; potassium channel	96.79
1zmo_A	244	Halohydrin dehalogenase; haloalcohol dehalogenase,	96.78
3uve_A	286	Carveol dehydrogenase ((+)-trans-carveol dehydrog;	96.78
1yxm_A	303	Pecra, peroxisomal trans 2-enoyl COA reductase; pe	96.78
3e05_A	204	Precorrin-6Y C5,15-methyltransferase (decarboxyla;	96.77
2hq1_A	247	Glucose/ribitol dehydrogenase; CTH-1438, structura	96.77
1ooe_A	236	Dihydropteridine reductase; structural genomics, P	96.77
1i1n_A	226	Protein-L-isoaspartate O-methyltransferase; S-aden	96.74
2qq5_A	260	DHRS1, dehydrogenase/reductase SDR family member 1	96.74
4da9_A	280	Short-chain dehydrogenase/reductase; structural ge	96.74
3o38_A	266	Short chain dehydrogenase; tuberculosis, ortholog	96.74
1dhr_A	241	Dihydropteridine reductase; oxidoreductase(acting	96.74
1jg1_A	235	PIMT;, protein-L-isoaspartate O-methyltransferase;	96.73
3oml_A	613	GH14720P, peroxisomal multifunctional enzyme type	96.71
1vl6_A	388	Malate oxidoreductase; TM0542, NAD-dependent malic	96.7
1r18_A	227	Protein-L-isoaspartate(D-aspartate)-O-methyltrans;	96.69
3uxy_A	266	Short-chain dehydrogenase/reductase SDR; structura	96.69
2nac_A	393	NAD-dependent formate dehydrogenase; oxidoreductas	96.69
2bd0_A	244	Sepiapterin reductase; oxidoreductase; HET: NAP BI	96.69
3hem_A	302	Cyclopropane-fatty-acyl-phospholipid synthase 2; p	96.68
2et6_A	604	(3R)-hydroxyacyl-COA dehydrogenase; MFE-2, beta-ox	96.67
3fbt_A	282	Chorismate mutase and shikimate 5-dehydrogenase fu	96.66
3s55_A	281	Putative short-chain dehydrogenase/reductase; stru	96.65
3uf0_A	273	Short-chain dehydrogenase/reductase SDR; gluconate	96.65
2hk9_A	275	Shikimate dehydrogenase; shikimate pathway, drug d	96.64
3tl3_A	257	Short-chain type dehydrogenase/reductase; ssgcid,	96.63
2gpy_A	233	O-methyltransferase; structural genomics, PSI, pro	96.62
3gg9_A	352	D-3-phosphoglycerate dehydrogenase oxidoreductase;	96.61
1gdh_A	320	D-glycerate dehydrogenase; oxidoreductase(CHOH (D)	96.61
1gz6_A	319	Estradiol 17 beta-dehydrogenase 4; 17BETA-HSD4, MF	96.6
3t7c_A	299	Carveol dehydrogenase; structural genomics, seattl	96.6
1yo6_A	250	Putative carbonyl reductase sniffer; tyrosine-depe	96.58
3nzo_A	399	UDP-N-acetylglucosamine 4,6-dehydratase; structura	96.57
3don_A	277	Shikimate dehydrogenase; alpha-beta structure, ros	96.56
1h5q_A	265	NADP-dependent mannitol dehydrogenase; oxidoreduct	96.55
3osu_A	246	3-oxoacyl-[acyl-carrier-protein] reductase; struct	96.55
2glx_A	332	1,5-anhydro-D-fructose reductase; NADP(H) dependen	96.53
2gas_A	307	Isoflavone reductase; NADPH-dependent reductase, o	96.53
3oec_A	317	Carveol dehydrogenase (mytha.01326.C, A0R518 HOMO;	96.53
2fk8_A	318	Methoxy mycolic acid synthase 4; S-adenosylmethion	96.52
4iin_A	271	3-ketoacyl-acyl carrier protein reductase (FABG);	96.52
3enk_A	341	UDP-glucose 4-epimerase; seattle structural genomi	96.51
2dkn_A	255	3-alpha-hydroxysteroid dehydrogenase; oxidoreducta	96.51
2qhx_A	328	Pteridine reductase 1; oxidoreductase, short-chain	96.51
2pwy_A	258	TRNA (adenine-N(1)-)-methyltransferase; mtase, ado	96.5
2i99_A	312	MU-crystallin homolog; thyroid hormine binding pro	96.5
1vbf_A	231	231AA long hypothetical protein-L-isoaspartate O-	96.5
3ujc_A	266	Phosphoethanolamine N-methyltransferase; parasite;	96.49
3nrc_A	280	Enoyl-[acyl-carrier-protein] reductase (NADH); ros	96.49
2ekp_A	239	2-deoxy-D-gluconate 3-dehydrogenase; structural ge	96.47
3sxp_A	362	ADP-L-glycero-D-mannoheptose-6-epimerase; rossman	96.47
3i4f_A	264	3-oxoacyl-[acyl-carrier protein] reductase; struct	96.46
3tum_A	269	Shikimate dehydrogenase family protein; rossmann-f	96.46
3grz_A	205	L11 mtase, ribosomal protein L11 methyltransferase	96.46
4hy3_A	365	Phosphoglycerate oxidoreductase; PSI-biology, stru	96.45
3pef_A	287	6-phosphogluconate dehydrogenase, NAD-binding; gam	96.44
4h15_A	261	Short chain alcohol dehydrogenase-related dehydro;	96.44
3u9l_A	324	3-oxoacyl-[acyl-carrier-protein] reductase; struct	96.44
1qyd_A	313	Pinoresinol-lariciresinol reductase; NADPH-depende	96.43
2dbq_A	334	Glyoxylate reductase; D-3-phosphoglycerate dehydro	96.43
4hkt_A	331	Inositol 2-dehydrogenase; structural genomics, nys	96.43
2et6_A	604	(3R)-hydroxyacyl-COA dehydrogenase; MFE-2, beta-ox	96.42
2wm3_A	299	NMRA-like family domain containing protein 1; unkn	96.42
3u0b_A	454	Oxidoreductase, short chain dehydrogenase/reducta	96.42
2nyu_A	196	Putative ribosomal RNA methyltransferase 2; SAM, s	96.4
3vtz_A	269	Glucose 1-dehydrogenase; rossmann fold, oxidoreduc	96.4
4dll_A	320	2-hydroxy-3-oxopropionate reductase; structural ge	96.4
3g0o_A	303	3-hydroxyisobutyrate dehydrogenase; NAD(P), valine	96.38
2x4g_A	342	Nucleoside-diphosphate-sugar epimerase; isomerase;	96.38
2h78_A	302	Hibadh, 3-hydroxyisobutyrate dehydrogenase; APC601	96.38
1xgk_A	352	Nitrogen metabolite repression regulator NMRA; ros	96.38
2nxc_A	254	L11 mtase, ribosomal protein L11 methyltransferase	96.37
3qlj_A	322	Short chain dehydrogenase; structural genomics, se	96.36
1mx3_A	347	CTBP1, C-terminal binding protein 1; nuclear prote	96.36
4id9_A	347	Short-chain dehydrogenase/reductase; putative dehy	96.35
2r6j_A	318	Eugenol synthase 1; phenylpropene, PIP reductase,	96.34
2pzm_A	330	Putative nucleotide sugar epimerase/ dehydratase;	96.33
4e5n_A	330	Thermostable phosphite dehydrogenase; D-2-hydroxya	96.32
3u62_A	253	Shikimate dehydrogenase; shikimate pathway, oxidor	96.3
3db2_A	354	Putative NADPH-dependent oxidoreductase; two domai	96.3
2gcg_A	330	Glyoxylate reductase/hydroxypyruvate reductase; NA	96.29
4e3z_A	272	Putative oxidoreductase protein; PSI-biology, stru	96.28
1nvt_A	287	Shikimate 5'-dehydrogenase; structural genomics, P	96.28
3gk3_A	269	Acetoacetyl-COA reductase; acetoacetyl-CO reductas	96.28
3doj_A	310	AT3G25530, dehydrogenase-like protein; gamma-hydro	96.27
1oaa_A	259	Sepiapterin reductase; tetrahydrobiopterin, oxidor	96.27
2w2k_A	348	D-mandelate dehydrogenase; 2-hydroxyacid dehydroge	96.26
3slg_A	372	PBGP3 protein; structural genomics, seattle struct	96.26
1sny_A	267	Sniffer CG10964-PA; alpha and beta protein, rossma	96.25
2ahr_A	259	Putative pyrroline carboxylate reductase; pyrrolin	96.24
4g2n_A	345	D-isomer specific 2-hydroxyacid dehydrogenase, Na;	96.24
3s8m_A	422	Enoyl-ACP reductase; rossmann fold, oxidoreductase	96.23
3c1o_A	321	Eugenol synthase; phenylpropene, PIP reductase, sh	96.23
3rft_A	267	Uronate dehydrogenase; apoenzyme, rossmann fold, N	96.23
2nm0_A	253	Probable 3-oxacyl-(acyl-carrier-protein) reductas;	96.23
2hnk_A	239	SAM-dependent O-methyltransferase; modified rossma	96.21
2d0i_A	333	Dehydrogenase; structural genomics, NPPSFA, nation	96.21
1j4a_A	333	D-LDH, D-lactate dehydrogenase; NAD-dependent dehy	96.21
3m33_A	226	Uncharacterized protein; structural genomics, PSI-	96.2
1nkv_A	256	Hypothetical protein YJHP; structural genomics, PS	96.18
1vpd_A	299	Tartronate semialdehyde reductase; structural geno	96.16
1nvm_B	312	Acetaldehyde dehydrogenase (acylating), 4-hydroxy-	96.16
3m2p_A	311	UDP-N-acetylglucosamine 4-epimerase; SGXNY, 11155J	96.16
3eey_A	197	Putative rRNA methylase; rRNA methylation, S-adeno	96.16
1sb8_A	352	WBPP; epimerase, 4-epimerase, UDP-galnac, UDP-GLCN	96.15
4e4y_A	244	Short chain dehydrogenase family protein; structur	96.15
2gb4_A	252	Thiopurine S-methyltransferase; 18204406, thiopuri	96.13
3rc1_A	350	Sugar 3-ketoreductase; sugar biosynthesis, TDP bin	96.13
1kpg_A	287	CFA synthase;, cyclopropane-fatty-acyl-phospholipi	96.12
3gvx_A	290	Glycerate dehydrogenase related protein; NYSGXRC,	96.12
3ezl_A	256	Acetoacetyl-COA reductase; ssgcid, acetyacetyl-COA	96.11
3euw_A	344	MYO-inositol dehydrogenase; protein structure init	96.09
1npy_A	271	Hypothetical shikimate 5-dehydrogenase-like protei	96.09
1vl0_A	292	DTDP-4-dehydrorhamnose reductase, RFBD ortholog; s	96.08
2avd_A	229	Catechol-O-methyltransferase; structural genomics,	96.08
3un1_A	260	Probable oxidoreductase; structural genomics, PSI-	96.07
3zu3_A	405	Putative reductase YPO4104/Y4119/YP_4011; oxidored	96.06
2yut_A	207	Putative short-chain oxidoreductase; alpha and bet	96.05
3hdj_A	313	Probable ornithine cyclodeaminase; APC62486, borde	96.04
1rkx_A	357	CDP-glucose-4,6-dehydratase; SDR, lyase; HET: NAD;	96.04
2bll_A	345	Protein YFBG; decarboxylase, short chain dehydroge	96.03
3tfw_A	248	Putative O-methyltransferase; PSI-biology, nysgrc,	96.02
2pi1_A	334	D-lactate dehydrogenase; oxidoreductase, D-LDH, NA	96.0
4iiu_A	267	3-oxoacyl-[acyl-carrier protein] reductase; struct	95.99
1dl5_A	317	Protein-L-isoaspartate O-methyltransferase; isoasp	95.99
4e12_A	283	Diketoreductase; oxidoreductase, NADH; HET: 1PE; 1	95.98
3i6i_A	346	Putative leucoanthocyanidin reductase 1; rossmann	95.97
3mti_A	185	RRNA methylase; SAM-dependent, PSI, MCSG, structur	95.97
2q1w_A	333	Putative nucleotide sugar epimerase/ dehydratase;	95.96
3e18_A	359	Oxidoreductase; dehydrogenase, NAD-binding, struct	95.94
3ggo_A	314	Prephenate dehydrogenase; TYRA, HPP, NADH, alpha-b	95.91
2g5c_A	281	Prephenate dehydrogenase; TYRA, oxidoreductase; HE	95.88
2c5a_A	379	GDP-mannose-3', 5'-epimerase; short chain dehydrat	95.88
3gdg_A	267	Probable NADP-dependent mannitol dehydrogenase; ro	95.87
3pdu_A	287	3-hydroxyisobutyrate dehydrogenase family protein;	95.86
3ezy_A	344	Dehydrogenase; structural genomics, unknown functi	95.85
2aef_A	234	Calcium-gated potassium channel MTHK; rossmann fol	95.83
3pp8_A	315	Glyoxylate/hydroxypyruvate reductase A; structural	95.82
3d1l_A	266	Putative NADP oxidoreductase BF3122; structural ge	95.82
2c29_D	337	Dihydroflavonol 4-reductase; flavonoids, short deh	95.82
1qyc_A	308	Phenylcoumaran benzylic ether reductase PT1; NADPH	95.82
1fbn_A	230	MJ fibrillarin homologue; MJ proteins, ribosomal R	95.81
1uay_A	242	Type II 3-hydroxyacyl-COA dehydrogenase; beta oxid	95.8
3q2i_A	354	Dehydrogenase; rossmann fold, UDP-sugar binding, N	95.79
4eue_A	418	Putative reductase CA_C0462; TER, biofuel, synthet	95.78
3e9m_A	330	Oxidoreductase, GFO/IDH/MOCA family; GFO/LDH/MOCA,	95.77
3dty_A	398	Oxidoreductase, GFO/IDH/MOCA family; MGCL2, tetram	95.77
2ydy_A	315	Methionine adenosyltransferase 2 subunit beta; oxi	95.77
1np3_A	338	Ketol-acid reductoisomerase; A DEEP figure-OF-eigh	95.76
3vc1_A	312	Geranyl diphosphate 2-C-methyltransferase; rossman	95.76
3ou2_A	218	SAM-dependent methyltransferase; O-methyltransfera	95.74
2f1k_A	279	Prephenate dehydrogenase; tyrosine synthesis, X-RA	95.74
3evt_A	324	Phosphoglycerate dehydrogenase; structural genomic	95.72
1ek6_A	348	UDP-galactose 4-epimerase; short-chain dehydrogena	95.71
3ius_A	286	Uncharacterized conserved protein; APC63810, silic	95.7
2uyy_A	316	N-PAC protein; long-chain dehydrogenase, cytokine;	95.69
2o7s_A	523	DHQ-SDH PR, bifunctional 3-dehydroquinate dehydrat	95.68
3v5n_A	417	Oxidoreductase; structural genomics, PSI-biology,	95.67
1xea_A	323	Oxidoreductase, GFO/IDH/MOCA family; structural ge	95.65
1yqg_A	263	Pyrroline-5-carboxylate reductase; structural geno	95.65
3dr5_A	221	Putative O-methyltransferase; Q8NRD3, CGL1119, PF0	95.65
4huj_A	220	Uncharacterized protein; PSI-biology, nysgrc, stru	95.64
1oc2_A	348	DTDP-glucose 4,6-dehydratase; lyase, NADH, rhamnos	95.63
3ktd_A	341	Prephenate dehydrogenase; structural genomics, joi	95.62
4had_A	350	Probable oxidoreductase protein; structural genomi	95.62
4fb5_A	393	Probable oxidoreductase protein; PSI-biology, nysg	95.61
1pjz_A	203	Thiopurine S-methyltransferase; polymorphism, S-ad	95.61
2yq5_A	343	D-isomer specific 2-hydroxyacid dehydrogenase; oxi	95.59
3qha_A	296	Putative oxidoreductase; seattle structural genomi	95.58
4b4u_A	303	Bifunctional protein fold; oxidoreductase; HET: NA	95.56
3e9n_A	245	Putative short-chain dehydrogenase/reductase; stru	95.55
2z5l_A	511	Tylkr1, tylactone synthase starter module and modu	95.55
1u8f_O	335	GAPDH, glyceraldehyde-3-phosphate dehydrogenase, l	95.54
1g8a_A	227	Fibrillarin-like PRE-rRNA processing protein; rRNA	95.53
2cuk_A	311	Glycerate dehydrogenase/glyoxylate reductase; stru	95.51
4g65_A	461	TRK system potassium uptake protein TRKA; structur	95.48
2q1s_A	377	Putative nucleotide sugar epimerase/ dehydratase;	95.48

>2cf5_A Atccad5, CAD, cinnamyl alcohol dehydrogenase; lignin biosynthesis, metal-binding, NADP, oxidoreductase, zinc; 2.0A {Arabidopsis thaliana} PDB: 2cf6_A*

Probab=100.00  E-value=1.3e-62  Score=459.62  Aligned_cols=349  Identities=52%  Similarity=0.968  Sum_probs=310.1

Q ss_pred             CCcccceeeeeecCCCCCccceeeccCCCCCCeEEEEEeeeccCcchHHhHhcCCCCCCCCCcccccccEEEEEeCCCCC
Q 018067            7 QEHPKNAFGWAAKDTSGVLSPFHFSRRATGEKDVTFKVTHCGICHSDLHMIKNEWGNTIYPIVPGHEIVGVVTEVGSKVS   86 (361)
Q Consensus         7 ~~~~~~~~~~~~~~~~~~l~~~~~~~p~~~~~evlV~v~~~~i~~~D~~~~~g~~~~~~~p~~lG~e~~G~Vv~vG~~v~   86 (361)
                      |.++|++.++..++.++.++++++|.|+|+++||||||+++|||++|++.++|.++...+|.++|||++|+|+++|++|+
T Consensus         4 m~~~m~~~a~~~~~~~~~l~~~~~~~p~~~~~eVlVkv~a~gi~~~D~~~~~g~~~~~~~P~v~GhE~~G~V~~vG~~v~   83 (357)
T 2cf5_A            4 MEAERKTTGWAARDPSGILSPYTYTLRETGPEDVNIRIICCGICHTDLHQTKNDLGMSNYPMVPGHEVVGEVVEVGSDVS   83 (357)
T ss_dssp             --CCCEEEEEEECSTTCCEEEEEEECCCCCTTEEEEEEEEEEECHHHHHHHTCTTTCCCSSBCCCCEEEEEEEEECSSCC
T ss_pred             ccCcceeEEEEEccCCCCcEEEEecCCCCCCCEEEEEEEEEeecchhhhhhcCCCCCCCCCeecCcceeEEEEEECCCCC
Confidence            45689999999988888999999999999999999999999999999999998765557899999999999999999999


Q ss_pred             CCCCCCEEEeccccCCCCCCcccccCCCCCCcchhcccccccCCCCcCCCcceeEEeecCCceEECCCCCCcccccccch
Q 018067           87 KFKVGDKVGVGCMVGSCRSCDSCAIDLENYCPKVIMTYANKYHDGTITYGGYSDIMVADEHFVVRIPEGTPLDATAPLLC  166 (361)
Q Consensus        87 ~~~~GdrV~~~~~~~~c~~c~~c~~~~~~~c~~~~~~~~~~~~~~~~~~g~~a~~v~v~~~~~~~ip~~~~~~~aa~l~~  166 (361)
                      +|++||||++.+...+||+|.+|++|.+++|.+..+.+.+....+....|+|+||+++|++.++++|+++++++||++++
T Consensus        84 ~~~vGdrV~~~~~~~~Cg~C~~c~~g~~~~C~~~~~~~~~~~~~g~~~~G~~aey~~v~~~~~~~~P~~ls~~~aa~l~~  163 (357)
T 2cf5_A           84 KFTVGDIVGVGCLVGCCGGCSPCERDLEQYCPKKIWSYNDVYINGQPTQGGFAKATVVHQKFVVKIPEGMAVEQAAPLLC  163 (357)
T ss_dssp             SCCTTCEEEECSEEECCSSSHHHHTTCGGGCTTCEETTTSBCTTSCBCCCSSBSCEEEEGGGEEECCSSCCHHHHTGGGT
T ss_pred             CCCCCCEEEEcCCCCCCCCChHHhCcCcccCCCccccccccccCCCCCCCccccEEEechhhEEECcCCCCHHHhhhhhh
Confidence            99999999988877799999999999999997665444333333445689999999999999999999999999999999


Q ss_pred             hhhhhhhHhhhcCCCC-CCCEEEEEcCChHHHHHHHHHHHcCCeEEEEeCCchhHHHHHHHcCCCEEecCCCHHHHHHhc
Q 018067          167 AGITVYSPLRFYGLDK-PGMHVGVVGLGGLGHVAVKFAKAMGVKVTVISTSPSKKSEAIERLGADSFLVSRDQDEMQAAM  245 (361)
Q Consensus       167 ~~~ta~~~l~~~~~~~-~g~~vlV~Gag~vG~~a~~la~~~g~~vi~~~~~~~~~~~~~~~~g~~~vv~~~~~~~~~~~~  245 (361)
                      ++.|||+++++.. ++ +|++|||+|+|++|++++|+|+.+|++|+++++++++++.+.+++|+++++++++.+.+.+++
T Consensus       164 ~~~ta~~~l~~~~-~~~~g~~VlV~GaG~vG~~a~qlak~~Ga~Vi~~~~~~~~~~~~~~~lGa~~vi~~~~~~~~~~~~  242 (357)
T 2cf5_A          164 AGVTVYSPLSHFG-LKQPGLRGGILGLGGVGHMGVKIAKAMGHHVTVISSSNKKREEALQDLGADDYVIGSDQAKMSELA  242 (357)
T ss_dssp             HHHHHHHHHHHTS-TTSTTCEEEEECCSHHHHHHHHHHHHHTCEEEEEESSTTHHHHHHTTSCCSCEEETTCHHHHHHST
T ss_pred             hHHHHHHHHHhcC-CCCCCCEEEEECCCHHHHHHHHHHHHCCCeEEEEeCChHHHHHHHHHcCCceeeccccHHHHHHhc
Confidence            9999999998754 67 999999999999999999999999999999999888776664489999999998877777777


Q ss_pred             CCccEEEEcCCCcccHHHHHhccccCCEEEEecCCCCCcc-cChHHHHhCCcEEEecccCCHHHHHHHHHHHHcCCCcee
Q 018067          246 GTMDGIIDTVSAVHPLMPLIGLLKSQGKLVLVGAPEKPLE-LPAFSLLMGRKIVGGSMIGGMKETQEMIDFAAKHNIRAD  324 (361)
Q Consensus       246 ~g~d~vid~~g~~~~~~~~~~~l~~~G~~v~~g~~~~~~~-~~~~~~~~~~~~i~g~~~~~~~~~~~~~~ll~~~~~~~~  324 (361)
                      +++|+|||++|++..+..++++++++|+++.+|....... ++.. ++.+++++.|++.++.++++++++++++|++++.
T Consensus       243 ~g~D~vid~~g~~~~~~~~~~~l~~~G~iv~~G~~~~~~~~~~~~-~~~~~~~i~g~~~~~~~~~~~~~~l~~~g~l~~~  321 (357)
T 2cf5_A          243 DSLDYVIDTVPVHHALEPYLSLLKLDGKLILMGVINNPLQFLTPL-LMLGRKVITGSFIGSMKETEEMLEFCKEKGLSSI  321 (357)
T ss_dssp             TTEEEEEECCCSCCCSHHHHTTEEEEEEEEECSCCSSCCCCCHHH-HHHHTCEEEECCSCCHHHHHHHHHHHHHTTCCCC
T ss_pred             CCCCEEEECCCChHHHHHHHHHhccCCEEEEeCCCCCCccccCHH-HHhCccEEEEEccCCHHHHHHHHHHHHcCCCCCc
Confidence            8999999999987668999999999999999998655444 5555 7889999999998888899999999999999988


Q ss_pred             EEEEecccHHHHHHHHHcCCCceEEEEEeCCcc
Q 018067          325 IEVIPADYVNTALERLAKADVRYRFVIDVANTM  357 (361)
Q Consensus       325 ~~~~~l~~~~~a~~~~~~~~~~gkvvi~~~~~~  357 (361)
                      +++|||+++++||+.+++++..||+|+.+++..
T Consensus       322 ~~~~~l~~~~~A~~~~~~~~~~gKvvi~~~~~~  354 (357)
T 2cf5_A          322 IEVVKMDYVNTAFERLEKNDVRYRFVVDVEGSN  354 (357)
T ss_dssp             EEEEEGGGHHHHHHHHHTTCSSSEEEEETTSCC
T ss_pred             eEEEeHHHHHHHHHHHHCCCCceEEEEeCCccc
Confidence            899999999999999999988899999997653

>1yqd_A Sinapyl alcohol dehydrogenase; lignin, monolignol, oxidoreductase, zinc-dependent, plant DE biosynthesis, substrate inhibition; HET: NAP; 1.65A {Populus tremuloides} PDB: 1yqx_A*

Probab=100.00  E-value=1.8e-62  Score=460.16  Aligned_cols=355  Identities=77%  Similarity=1.282  Sum_probs=316.2

Q ss_pred             CCCCCCCCcccceeeeeecCCCCCccceeeccCCCCCCeEEEEEeeeccCcchHHhHhcCCCCCCCCCcccccccEEEEE
Q 018067            1 MGQAPEQEHPKNAFGWAAKDTSGVLSPFHFSRRATGEKDVTFKVTHCGICHSDLHMIKNEWGNTIYPIVPGHEIVGVVTE   80 (361)
Q Consensus         1 m~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~p~~~~~evlV~v~~~~i~~~D~~~~~g~~~~~~~p~~lG~e~~G~Vv~   80 (361)
                      |...|+..++|++++|..++.++.++++++|.|+|+++||||||+++|||++|++.+.|.++...+|.++|||++|+|++
T Consensus         5 ~~~~~~~~~~mk~~~~~~~~~~~~l~~~~~~~p~~~~~eVlVkv~a~gi~~~D~~~~~g~~~~~~~P~v~GhE~~G~V~~   84 (366)
T 1yqd_A            5 MSKSPEEEHPVKAFGWAARDQSGHLSPFNFSRRATGEEDVRFKVLYCGVCHSDLHSIKNDWGFSMYPLVPGHEIVGEVTE   84 (366)
T ss_dssp             ---CHHHHSSEEEEEEEECSTTCCEEEEEEEECCCCTTEEEEEEEEEEECHHHHHHHHTSSSCCCSSBCCCCCEEEEEEE
T ss_pred             cCCCcchhCCeeEEEEEEcCCCCCcEEEEccCCCCCCCeEEEEEEEEeechhhHHHHcCCCCCCCCCEecccceEEEEEE
Confidence            34455556689999999988888999999999999999999999999999999999998765557899999999999999


Q ss_pred             eCCCCCCCCCCCEEEeccccCCCCCCcccccCCCCCCcchhcccccccCCCCcCCCcceeEEeecCCceEECCCCCCccc
Q 018067           81 VGSKVSKFKVGDKVGVGCMVGSCRSCDSCAIDLENYCPKVIMTYANKYHDGTITYGGYSDIMVADEHFVVRIPEGTPLDA  160 (361)
Q Consensus        81 vG~~v~~~~~GdrV~~~~~~~~c~~c~~c~~~~~~~c~~~~~~~~~~~~~~~~~~g~~a~~v~v~~~~~~~ip~~~~~~~  160 (361)
                      +|++|++|++||||++.+...+||+|.+|++|.+++|.+..+.+.+....+....|+|+||+.+|+++++++|+++++++
T Consensus        85 vG~~V~~~~vGDrV~~~~~~~~Cg~C~~c~~g~~~~C~~~~~~~~~~~~~g~~~~G~~aey~~v~~~~~~~~P~~ls~~~  164 (366)
T 1yqd_A           85 VGSKVKKVNVGDKVGVGCLVGACHSCESCANDLENYCPKMILTYASIYHDGTITYGGYSNHMVANERYIIRFPDNMPLDG  164 (366)
T ss_dssp             ECTTCCSCCTTCEEEECSEEECCSSSHHHHTTCGGGCTTCEESSSSBCTTSCBCCCSSBSEEEEEGGGCEECCTTSCTTT
T ss_pred             ECCCCCcCCCCCEEEEcCCcCCCCCChhhhCcCcccCCcccccccccccCCCcCCCccccEEEEchhhEEECCCCCCHHH
Confidence            99999999999999987777799999999999999997655444333333445689999999999999999999999999


Q ss_pred             ccccchhhhhhhhHhhhcCCCC-CCCEEEEEcCChHHHHHHHHHHHcCCeEEEEeCCchhHHHHHHHcCCCEEecCCCHH
Q 018067          161 TAPLLCAGITVYSPLRFYGLDK-PGMHVGVVGLGGLGHVAVKFAKAMGVKVTVISTSPSKKSEAIERLGADSFLVSRDQD  239 (361)
Q Consensus       161 aa~l~~~~~ta~~~l~~~~~~~-~g~~vlV~Gag~vG~~a~~la~~~g~~vi~~~~~~~~~~~~~~~~g~~~vv~~~~~~  239 (361)
                      ||++++++.|||+++++.. ++ +|++|||+|+|++|++++|+|+.+|++|+++++++++++.+.+++|++.++++++.+
T Consensus       165 aa~l~~~~~ta~~al~~~~-~~~~g~~VlV~GaG~vG~~~~q~a~~~Ga~Vi~~~~~~~~~~~~~~~lGa~~v~~~~~~~  243 (366)
T 1yqd_A          165 GAPLLCAGITVYSPLKYFG-LDEPGKHIGIVGLGGLGHVAVKFAKAFGSKVTVISTSPSKKEEALKNFGADSFLVSRDQE  243 (366)
T ss_dssp             TGGGGTHHHHHHHHHHHTT-CCCTTCEEEEECCSHHHHHHHHHHHHTTCEEEEEESCGGGHHHHHHTSCCSEEEETTCHH
T ss_pred             hhhhhhhHHHHHHHHHhcC-cCCCCCEEEEECCCHHHHHHHHHHHHCCCEEEEEeCCHHHHHHHHHhcCCceEEeccCHH
Confidence            9999999999999998765 67 999999999999999999999999999999999988877775589999999998887


Q ss_pred             HHHHhcCCccEEEEcCCCcccHHHHHhccccCCEEEEecCCCCCcccChHHHHhCCcEEEecccCCHHHHHHHHHHHHcC
Q 018067          240 EMQAAMGTMDGIIDTVSAVHPLMPLIGLLKSQGKLVLVGAPEKPLELPAFSLLMGRKIVGGSMIGGMKETQEMIDFAAKH  319 (361)
Q Consensus       240 ~~~~~~~g~d~vid~~g~~~~~~~~~~~l~~~G~~v~~g~~~~~~~~~~~~~~~~~~~i~g~~~~~~~~~~~~~~ll~~~  319 (361)
                      .+.++.+++|+|||++|....+..++++++++|+++.+|.......++...++.+++++.|++....++++++++++.+|
T Consensus       244 ~~~~~~~~~D~vid~~g~~~~~~~~~~~l~~~G~iv~~g~~~~~~~~~~~~~~~~~~~i~g~~~~~~~~~~~~~~l~~~g  323 (366)
T 1yqd_A          244 QMQAAAGTLDGIIDTVSAVHPLLPLFGLLKSHGKLILVGAPEKPLELPAFSLIAGRKIVAGSGIGGMKETQEMIDFAAKH  323 (366)
T ss_dssp             HHHHTTTCEEEEEECCSSCCCSHHHHHHEEEEEEEEECCCCSSCEEECHHHHHTTTCEEEECCSCCHHHHHHHHHHHHHT
T ss_pred             HHHHhhCCCCEEEECCCcHHHHHHHHHHHhcCCEEEEEccCCCCCCcCHHHHHhCCcEEEEecCCCHHHHHHHHHHHHcC
Confidence            78787789999999999876689999999999999999987666667777888999999999988888999999999999


Q ss_pred             CCceeEEEEecccHHHHHHHHHcCCCceEEEEEeCCc
Q 018067          320 NIRADIEVIPADYVNTALERLAKADVRYRFVIDVANT  356 (361)
Q Consensus       320 ~~~~~~~~~~l~~~~~a~~~~~~~~~~gkvvi~~~~~  356 (361)
                      ++++.+++|||+++++||+.+++++..||+|+.++++
T Consensus       324 ~l~~~~~~~~l~~~~~A~~~~~~~~~~gKvvl~~~~~  360 (366)
T 1yqd_A          324 NITADIEVISTDYLNTAMERLAKNDVRYRFVIDVGNT  360 (366)
T ss_dssp             TCCCCEEEECGGGHHHHHHHHHTTCCSSEEEECHHHH
T ss_pred             CCCCceEEEcHHHHHHHHHHHHcCCcceEEEEEcccc
Confidence            9998889999999999999999998889999998654

>3two_A Mannitol dehydrogenase; cinnamyl-alcohol dehydrogenase, NADP(H) oxidoreductase; HET: NDP; 2.18A {Helicobacter pylori}

Probab=100.00  E-value=3e-61  Score=449.15  Aligned_cols=340  Identities=43%  Similarity=0.808  Sum_probs=297.7

Q ss_pred             cceeeeeecCCCCCccceeeccCCCCCCeEEEEEeeeccCcchHHhHhcCCCCCCCCCcccccccEEEEEeCCCCCCCCC
Q 018067           11 KNAFGWAAKDTSGVLSPFHFSRRATGEKDVTFKVTHCGICHSDLHMIKNEWGNTIYPIVPGHEIVGVVTEVGSKVSKFKV   90 (361)
Q Consensus        11 ~~~~~~~~~~~~~~l~~~~~~~p~~~~~evlV~v~~~~i~~~D~~~~~g~~~~~~~p~~lG~e~~G~Vv~vG~~v~~~~~   90 (361)
                      |++.++...+.++.++++++|.|+|+++||||||+++|||++|++.++|..+...+|.++|||++|+|+++|++|++|++
T Consensus         3 m~mka~~~~~~~~~l~~~~~~~P~~~~~eVlVkv~a~gi~~~D~~~~~g~~~~~~~p~i~G~E~~G~V~~vG~~v~~~~v   82 (348)
T 3two_A            3 VQSKGFAIFSKDEHFKPHDFSRHAVGPRDVLIDILYAGICHSDIHSAYSEWKEGIYPMIPGHEIAGIIKEVGKGVKKFKI   82 (348)
T ss_dssp             EEEEEEEBCSTTSCCEEEEEEECCCCTTEEEEEEEEEEECHHHHHHHTTSSSCCCSSBCCCCCEEEEEEEECTTCCSCCT
T ss_pred             eEEEEEEEccCCCCCeEEEeeCCCCCCCeEEEEEEEeeecccchhhhcCCCCCCCCCeecCcceeEEEEEECCCCCCCCC
Confidence            34445555445567999999999999999999999999999999999998877788999999999999999999999999


Q ss_pred             CCEEEeccccCCCCCCcccccCCCCCCcchhccccc--ccCCCCcCCCcceeEEeecCCceEECCCCCCcccccccchhh
Q 018067           91 GDKVGVGCMVGSCRSCDSCAIDLENYCPKVIMTYAN--KYHDGTITYGGYSDIMVADEHFVVRIPEGTPLDATAPLLCAG  168 (361)
Q Consensus        91 GdrV~~~~~~~~c~~c~~c~~~~~~~c~~~~~~~~~--~~~~~~~~~g~~a~~v~v~~~~~~~ip~~~~~~~aa~l~~~~  168 (361)
                      ||||++.+...+||+|.+|++|.+++|......+..  ....+....|+|+||+.+++++++++|+++++++||++++++
T Consensus        83 GdrV~~~~~~~~Cg~C~~C~~g~~~~c~~~~~~~~~~~~~~~~~~~~G~~aey~~v~~~~~~~iP~~~~~~~aa~l~~~~  162 (348)
T 3two_A           83 GDVVGVGCFVNSCKACKPCKEHQEQFCTKVVFTYDCLDSFHDNEPHMGGYSNNIVVDENYVISVDKNAPLEKVAPLLCAG  162 (348)
T ss_dssp             TCEEEECSEEECCSCSHHHHTTCGGGCTTCEESSSSEEGGGTTEECCCSSBSEEEEEGGGCEECCTTSCHHHHGGGGTHH
T ss_pred             CCEEEEeCCcCCCCCChhHhCCCcccCcccccccccccccccCCcCCccccceEEechhhEEECCCCCCHHHhhhhhhhH
Confidence            999998887779999999999999999833222211  111233445999999999999999999999999999999999


Q ss_pred             hhhhhHhhhcCCCCCCCEEEEEcCChHHHHHHHHHHHcCCeEEEEeCCchhHHHHHHHcCCCEEecCCCHHHHHHhcCCc
Q 018067          169 ITVYSPLRFYGLDKPGMHVGVVGLGGLGHVAVKFAKAMGVKVTVISTSPSKKSEAIERLGADSFLVSRDQDEMQAAMGTM  248 (361)
Q Consensus       169 ~ta~~~l~~~~~~~~g~~vlV~Gag~vG~~a~~la~~~g~~vi~~~~~~~~~~~~~~~~g~~~vv~~~~~~~~~~~~~g~  248 (361)
                      .|||+++++. ++++|++|||+|+|++|++++|+|+.+|++|+++++++++++.+ +++|++.++  .+++.   +..++
T Consensus       163 ~ta~~~l~~~-~~~~g~~VlV~GaG~vG~~a~qla~~~Ga~Vi~~~~~~~~~~~~-~~lGa~~v~--~~~~~---~~~~~  235 (348)
T 3two_A          163 ITTYSPLKFS-KVTKGTKVGVAGFGGLGSMAVKYAVAMGAEVSVFARNEHKKQDA-LSMGVKHFY--TDPKQ---CKEEL  235 (348)
T ss_dssp             HHHHHHHHHT-TCCTTCEEEEESCSHHHHHHHHHHHHTTCEEEEECSSSTTHHHH-HHTTCSEEE--SSGGG---CCSCE
T ss_pred             HHHHHHHHhc-CCCCCCEEEEECCcHHHHHHHHHHHHCCCeEEEEeCCHHHHHHH-HhcCCCeec--CCHHH---HhcCC
Confidence            9999999876 68999999999999999999999999999999999888876655 889999988  34332   23399


Q ss_pred             cEEEEcCCCcccHHHHHhccccCCEEEEecCCC-CCcc-cChHHHH-hCCcEEEecccCCHHHHHHHHHHHHcCCCceeE
Q 018067          249 DGIIDTVSAVHPLMPLIGLLKSQGKLVLVGAPE-KPLE-LPAFSLL-MGRKIVGGSMIGGMKETQEMIDFAAKHNIRADI  325 (361)
Q Consensus       249 d~vid~~g~~~~~~~~~~~l~~~G~~v~~g~~~-~~~~-~~~~~~~-~~~~~i~g~~~~~~~~~~~~~~ll~~~~~~~~~  325 (361)
                      |+|||++|+...+..++++++++|+++.+|... .... ++...++ .+++++.|+..++.++++++++++++|++++.+
T Consensus       236 D~vid~~g~~~~~~~~~~~l~~~G~iv~~G~~~~~~~~~~~~~~~~~~~~~~i~g~~~~~~~~~~~~~~l~~~g~l~~~~  315 (348)
T 3two_A          236 DFIISTIPTHYDLKDYLKLLTYNGDLALVGLPPVEVAPVLSVFDFIHLGNRKVYGSLIGGIKETQEMVDFSIKHNIYPEI  315 (348)
T ss_dssp             EEEEECCCSCCCHHHHHTTEEEEEEEEECCCCCGGGCCEEEHHHHHHTCSCEEEECCSCCHHHHHHHHHHHHHTTCCCCE
T ss_pred             CEEEECCCcHHHHHHHHHHHhcCCEEEEECCCCCCCcccCCHHHHHhhCCeEEEEEecCCHHHHHHHHHHHHhCCCCceE
Confidence            999999999866999999999999999999876 5555 7777777 899999999999999999999999999999988


Q ss_pred             EEEecccHHHHHHHHHcCCCceEEEEEeCCcc
Q 018067          326 EVIPADYVNTALERLAKADVRYRFVIDVANTM  357 (361)
Q Consensus       326 ~~~~l~~~~~a~~~~~~~~~~gkvvi~~~~~~  357 (361)
                      ++|||+++++||+.+.+++..||+|+++++++
T Consensus       316 ~~~~l~~~~~A~~~~~~~~~~gKvVi~~~~~~  347 (348)
T 3two_A          316 DLILGKDIDTAYHNLTHGKAKFRYVIDMKKSF  347 (348)
T ss_dssp             EEECGGGHHHHHHHHHTTCCCSEEEEEGGGCC
T ss_pred             EEEEHHHHHHHHHHHHcCCCceEEEEecCCcC
Confidence            99999999999999999998899999998765

>1uuf_A YAHK, zinc-type alcohol dehydrogenase-like protein YAHK; oxidoreductase, zinc binding, oxydoreductase, metal-binding; 1.76A {Escherichia coli} SCOP: b.35.1.2 c.2.1.1

Probab=100.00  E-value=1.6e-60  Score=447.08  Aligned_cols=344  Identities=49%  Similarity=0.846  Sum_probs=298.8

Q ss_pred             ccceeeeeecCCCCCccceeeccCCCCCCeEEEEEeeeccCcchHHhHhcCCCCCCCCCcccccccEEEEEeCCCCCCCC
Q 018067           10 PKNAFGWAAKDTSGVLSPFHFSRRATGEKDVTFKVTHCGICHSDLHMIKNEWGNTIYPIVPGHEIVGVVTEVGSKVSKFK   89 (361)
Q Consensus        10 ~~~~~~~~~~~~~~~l~~~~~~~p~~~~~evlV~v~~~~i~~~D~~~~~g~~~~~~~p~~lG~e~~G~Vv~vG~~v~~~~   89 (361)
                      .|++.+|...+..+.++++++|.|+|+++||||||+++|||++|++.+.|.++...+|.++|||++|+|+++|++|++|+
T Consensus        20 ~~~~~a~~~~~~~~~l~~~~~p~P~~~~~eVlVkv~a~gi~~~D~~~~~g~~~~~~~P~v~GhE~~G~V~~vG~~V~~~~   99 (369)
T 1uuf_A           20 GLKIKAVGAYSAKQPLEPMDITRREPGPNDVKIEIAYCGVCHSDLHQVRSEWAGTVYPCVPGHEIVGRVVAVGDQVEKYA   99 (369)
T ss_dssp             ---CEEEEBSSTTSCCEEEECCCCCCCTTEEEEEEEEEECCHHHHHHHHCTTSCCCSSBCCCCCEEEEEEEECTTCCSCC
T ss_pred             CceEEEEEEcCCCCCcEEEEecCCCCCCCeEEEEEEEEeecHHHHHHhcCCCCCCCCCeecccCceEEEEEECCCCCCCC
Confidence            56777776654557899999999999999999999999999999999998765556799999999999999999999999


Q ss_pred             CCCEEEeccccCCCCCCcccccCCCCCCcchhccccccc-CCCCcCCCcceeEEeecCCceEECCCC-CCcccccccchh
Q 018067           90 VGDKVGVGCMVGSCRSCDSCAIDLENYCPKVIMTYANKY-HDGTITYGGYSDIMVADEHFVVRIPEG-TPLDATAPLLCA  167 (361)
Q Consensus        90 ~GdrV~~~~~~~~c~~c~~c~~~~~~~c~~~~~~~~~~~-~~~~~~~g~~a~~v~v~~~~~~~ip~~-~~~~~aa~l~~~  167 (361)
                      +||||++.++.+.||+|.+|++|.+|+|++....+.+.. ..|....|+|+||+.+|++.++++|++ +++++||+++++
T Consensus       100 vGDrV~~~~~~~~Cg~C~~C~~g~~~~C~~~~~~~~~~~~~~g~~~~G~~aeyv~v~~~~~~~~P~~~ls~~~aa~l~~~  179 (369)
T 1uuf_A          100 PGDLVGVGCIVDSCKHCEECEDGLENYCDHMTGTYNSPTPDEPGHTLGGYSQQIVVHERYVLRIRHPQEQLAAVAPLLCA  179 (369)
T ss_dssp             TTCEEEECSEEECCSSSHHHHTTCGGGCTTCEETTTSBCSSTTSBCCCSSBSEEEEEGGGCEECCSCGGGHHHHGGGGTH
T ss_pred             CCCEEEEccCCCCCCCCcccCCCCcccCcchhcccccccccCCCCCCCcccceEEEcchhEEECCCCCCCHHHhhhhhhh
Confidence            999999988888999999999999999997632221110 013345799999999999999999999 999999999999


Q ss_pred             hhhhhhHhhhcCCCCCCCEEEEEcCChHHHHHHHHHHHcCCeEEEEeCCchhHHHHHHHcCCCEEecCCCHHHHHHhcCC
Q 018067          168 GITVYSPLRFYGLDKPGMHVGVVGLGGLGHVAVKFAKAMGVKVTVISTSPSKKSEAIERLGADSFLVSRDQDEMQAAMGT  247 (361)
Q Consensus       168 ~~ta~~~l~~~~~~~~g~~vlV~Gag~vG~~a~~la~~~g~~vi~~~~~~~~~~~~~~~~g~~~vv~~~~~~~~~~~~~g  247 (361)
                      +.|||+++++. ++++|++|||+|+|++|++++|+|+.+|++|+++++++++++.+ +++|++.++++++++.+.++.++
T Consensus       180 ~~tA~~al~~~-~~~~g~~VlV~GaG~vG~~aiqlak~~Ga~Vi~~~~~~~~~~~a-~~lGa~~vi~~~~~~~~~~~~~g  257 (369)
T 1uuf_A          180 GITTYSPLRHW-QAGPGKKVGVVGIGGLGHMGIKLAHAMGAHVVAFTTSEAKREAA-KALGADEVVNSRNADEMAAHLKS  257 (369)
T ss_dssp             HHHHHHHHHHT-TCCTTCEEEEECCSHHHHHHHHHHHHTTCEEEEEESSGGGHHHH-HHHTCSEEEETTCHHHHHTTTTC
T ss_pred             HHHHHHHHHhc-CCCCCCEEEEECCCHHHHHHHHHHHHCCCEEEEEeCCHHHHHHH-HHcCCcEEeccccHHHHHHhhcC
Confidence            99999999875 68999999999999999999999999999999999888776555 78999999999888777777779


Q ss_pred             ccEEEEcCCCcccHHHHHhccccCCEEEEecCCCCCc-ccChHHHHhCCcEEEecccCCHHHHHHHHHHHHcCCCceeEE
Q 018067          248 MDGIIDTVSAVHPLMPLIGLLKSQGKLVLVGAPEKPL-ELPAFSLLMGRKIVGGSMIGGMKETQEMIDFAAKHNIRADIE  326 (361)
Q Consensus       248 ~d~vid~~g~~~~~~~~~~~l~~~G~~v~~g~~~~~~-~~~~~~~~~~~~~i~g~~~~~~~~~~~~~~ll~~~~~~~~~~  326 (361)
                      +|++||++|.+..+..++++++++|+++.+|...... .++...++.+++++.|+...+.++++++++++++|++++.++
T Consensus       258 ~Dvvid~~g~~~~~~~~~~~l~~~G~iv~~G~~~~~~~~~~~~~~~~~~~~i~g~~~~~~~~~~~~~~l~~~g~i~~~i~  337 (369)
T 1uuf_A          258 FDFILNTVAAPHNLDDFTTLLKRDGTMTLVGAPATPHKSPEVFNLIMKRRAIAGSMIGGIPETQEMLDFCAEHGIVADIE  337 (369)
T ss_dssp             EEEEEECCSSCCCHHHHHTTEEEEEEEEECCCC-------CHHHHHTTTCEEEECCSCCHHHHHHHHHHHHHHTCCCCEE
T ss_pred             CCEEEECCCCHHHHHHHHHHhccCCEEEEeccCCCCccccCHHHHHhCCcEEEEeecCCHHHHHHHHHHHHhCCCCcceE
Confidence            9999999998866999999999999999999876544 677777888999999999888889999999999999998888


Q ss_pred             EEecccHHHHHHHHHcCCCceEEEEEeCC
Q 018067          327 VIPADYVNTALERLAKADVRYRFVIDVAN  355 (361)
Q Consensus       327 ~~~l~~~~~a~~~~~~~~~~gkvvi~~~~  355 (361)
                      +|||+++++||+.+.+++..||+|+.+++
T Consensus       338 ~~~l~~~~~A~~~~~~~~~~gKvvi~~~~  366 (369)
T 1uuf_A          338 MIRADQINEAYERMLRGDVKYRFVIDNRT  366 (369)
T ss_dssp             EECGGGHHHHHHHHHTTCSSSEEEEEGGG
T ss_pred             EEcHHHHHHHHHHHHcCCCceEEEEecCC
Confidence            89999999999999999888999999865

>3s2e_A Zinc-containing alcohol dehydrogenase superfamily; FURX, oxidoreductase; HET: NAD; 1.76A {Ralstonia eutropha} PDB: 3s1l_A* 3s2f_A* 3s2g_A* 3s2i_A* 1llu_A* 3meq_A*

Probab=100.00  E-value=7.6e-61  Score=445.16  Aligned_cols=335  Identities=34%  Similarity=0.595  Sum_probs=301.1

Q ss_pred             ccceeeeeecCCCCCccceeeccCCCCCCeEEEEEeeeccCcchHHhHhcCCCC-CCCCCcccccccEEEEEeCCCCCCC
Q 018067           10 PKNAFGWAAKDTSGVLSPFHFSRRATGEKDVTFKVTHCGICHSDLHMIKNEWGN-TIYPIVPGHEIVGVVTEVGSKVSKF   88 (361)
Q Consensus        10 ~~~~~~~~~~~~~~~l~~~~~~~p~~~~~evlV~v~~~~i~~~D~~~~~g~~~~-~~~p~~lG~e~~G~Vv~vG~~v~~~   88 (361)
                      +|+++.+..+++  .++++++|.|+|+++||||||+++|||++|++.++|.++. ..+|.++|||++|+|+++|++|++|
T Consensus         2 ~MkA~~~~~~g~--~l~~~~~~~P~~~~~eVlVkv~a~gi~~~D~~~~~g~~~~~~~~P~v~G~E~~G~V~~vG~~v~~~   79 (340)
T 3s2e_A            2 MMKAAVVRAFGA--PLTIDEVPVPQPGPGQVQVKIEASGVCHTDLHAADGDWPVKPTLPFIPGHEGVGYVSAVGSGVSRV   79 (340)
T ss_dssp             EEEEEEBCSTTS--CCEEEEEECCCCCTTCEEEEEEEEEECHHHHHHHHTCSSSCCCSSBCCCSEEEEEEEEECSSCCSC
T ss_pred             ceEEEEEecCCC--CCEEEEccCCCCCCCeEEEEEEEeccCHHHHHHHcCCCCCCCCCCcccCCcceEEEEEECCCCCcC
Confidence            588888765443  3889999999999999999999999999999999997764 4789999999999999999999999


Q ss_pred             CCCCEEEeccccCCCCCCcccccCCCCCCcchhcccccccCCCCcCCCcceeEEeecCCceEECCCCCCcccccccchhh
Q 018067           89 KVGDKVGVGCMVGSCRSCDSCAIDLENYCPKVIMTYANKYHDGTITYGGYSDIMVADEHFVVRIPEGTPLDATAPLLCAG  168 (361)
Q Consensus        89 ~~GdrV~~~~~~~~c~~c~~c~~~~~~~c~~~~~~~~~~~~~~~~~~g~~a~~v~v~~~~~~~ip~~~~~~~aa~l~~~~  168 (361)
                      ++||||++.....+|+.|.+|++|.++.|.+....       |...+|+|+||+.+++++++++|+++++++||++++++
T Consensus        80 ~vGdrV~~~~~~~~cg~C~~c~~g~~~~c~~~~~~-------g~~~~G~~aey~~v~~~~~~~iP~~~~~~~aa~l~~~~  152 (340)
T 3s2e_A           80 KEGDRVGVPWLYSACGYCEHCLQGWETLCEKQQNT-------GYSVNGGYGEYVVADPNYVGLLPDKVGFVEIAPILCAG  152 (340)
T ss_dssp             CTTCEEEEESEEECCSSSHHHHTTCGGGCTTCEEB-------TTTBCCSSBSEEEECTTTSEECCTTSCHHHHGGGGTHH
T ss_pred             CCCCEEEecCCCCCCCCChHHhCcCcccCcccccc-------CCCCCCcceeEEEechHHEEECCCCCCHHHhhcccchh
Confidence            99999976666679999999999999999986442       45678999999999999999999999999999999999


Q ss_pred             hhhhhHhhhcCCCCCCCEEEEEcCChHHHHHHHHHHHcCCeEEEEeCCchhHHHHHHHcCCCEEecCCCHHHHH---Hhc
Q 018067          169 ITVYSPLRFYGLDKPGMHVGVVGLGGLGHVAVKFAKAMGVKVTVISTSPSKKSEAIERLGADSFLVSRDQDEMQ---AAM  245 (361)
Q Consensus       169 ~ta~~~l~~~~~~~~g~~vlV~Gag~vG~~a~~la~~~g~~vi~~~~~~~~~~~~~~~~g~~~vv~~~~~~~~~---~~~  245 (361)
                      .|||++++. .++++|++|||+|+|++|++++|+|+.+|++|+++++++++++. ++++|++.++++++++...   +..
T Consensus       153 ~ta~~~l~~-~~~~~g~~VlV~GaG~vG~~a~qla~~~Ga~Vi~~~~~~~~~~~-~~~lGa~~~i~~~~~~~~~~~~~~~  230 (340)
T 3s2e_A          153 VTVYKGLKV-TDTRPGQWVVISGIGGLGHVAVQYARAMGLRVAAVDIDDAKLNL-ARRLGAEVAVNARDTDPAAWLQKEI  230 (340)
T ss_dssp             HHHHHHHHT-TTCCTTSEEEEECCSTTHHHHHHHHHHTTCEEEEEESCHHHHHH-HHHTTCSEEEETTTSCHHHHHHHHH
T ss_pred             HHHHHHHHH-cCCCCCCEEEEECCCHHHHHHHHHHHHCCCeEEEEeCCHHHHHH-HHHcCCCEEEeCCCcCHHHHHHHhC
Confidence            999999965 46899999999999999999999999999999999998877654 5899999999988754433   334


Q ss_pred             CCccEEEEcCCCcccHHHHHhccccCCEEEEecCCCCCcccChHHHHhCCcEEEecccCCHHHHHHHHHHHHcCCCceeE
Q 018067          246 GTMDGIIDTVSAVHPLMPLIGLLKSQGKLVLVGAPEKPLELPAFSLLMGRKIVGGSMIGGMKETQEMIDFAAKHNIRADI  325 (361)
Q Consensus       246 ~g~d~vid~~g~~~~~~~~~~~l~~~G~~v~~g~~~~~~~~~~~~~~~~~~~i~g~~~~~~~~~~~~~~ll~~~~~~~~~  325 (361)
                      +++|++||++|+...+..++++++++|+++.+|.......++...++.+++++.|+...+.++++++++++++|++++.+
T Consensus       231 g~~d~vid~~g~~~~~~~~~~~l~~~G~iv~~G~~~~~~~~~~~~~~~~~~~i~g~~~~~~~~~~~~~~l~~~g~l~~~~  310 (340)
T 3s2e_A          231 GGAHGVLVTAVSPKAFSQAIGMVRRGGTIALNGLPPGDFGTPIFDVVLKGITIRGSIVGTRSDLQESLDFAAHGDVKATV  310 (340)
T ss_dssp             SSEEEEEESSCCHHHHHHHHHHEEEEEEEEECSCCSSEEEEEHHHHHHTTCEEEECCSCCHHHHHHHHHHHHTTSCCCCE
T ss_pred             CCCCEEEEeCCCHHHHHHHHHHhccCCEEEEeCCCCCCCCCCHHHHHhCCeEEEEEecCCHHHHHHHHHHHHhCCCCceE
Confidence            58999999999887799999999999999999987777777888888999999999999999999999999999999988


Q ss_pred             EEEecccHHHHHHHHHcCCCceEEEEEeCC
Q 018067          326 EVIPADYVNTALERLAKADVRYRFVIDVAN  355 (361)
Q Consensus       326 ~~~~l~~~~~a~~~~~~~~~~gkvvi~~~~  355 (361)
                      ++++|+++++||+.+++++..||+|+++++
T Consensus       311 ~~~~l~~~~~A~~~~~~~~~~Gkvvv~~~~  340 (340)
T 3s2e_A          311 STAKLDDVNDVFGRLREGKVEGRVVLDFSR  340 (340)
T ss_dssp             EEECGGGHHHHHHHHHTTCCCSEEEEECCC
T ss_pred             EEEeHHHHHHHHHHHHcCCCceEEEEecCC
Confidence            999999999999999999999999999864

>1piw_A Hypothetical zinc-type alcohol dehydrogenase- like protein in PRE5-FET4 intergenic...; ADH topology, NADP(H)dependent, oxidoreductase; HET: NAP; 3.00A {Saccharomyces cerevisiae} SCOP: b.35.1.2 c.2.1.1 PDB: 1ps0_A* 1q1n_A

Probab=100.00  E-value=6.9e-61  Score=448.65  Aligned_cols=346  Identities=35%  Similarity=0.628  Sum_probs=300.8

Q ss_pred             CCcccceeeeeecCCCCCcccee--eccCCCCCCeEEEEEeeeccCcchHHhHhcCCCCCCCCCcccccccEEEEEeCCC
Q 018067            7 QEHPKNAFGWAAKDTSGVLSPFH--FSRRATGEKDVTFKVTHCGICHSDLHMIKNEWGNTIYPIVPGHEIVGVVTEVGSK   84 (361)
Q Consensus         7 ~~~~~~~~~~~~~~~~~~l~~~~--~~~p~~~~~evlV~v~~~~i~~~D~~~~~g~~~~~~~p~~lG~e~~G~Vv~vG~~   84 (361)
                      +|.+|+++.+..++  +.+++++  +|.|+|+++||||||+++|||++|++.++|.++...+|.++|||++|+|+++|++
T Consensus         3 ~p~~mka~~~~~~~--~~l~~~~~~~~~P~~~~~eVlVkv~a~gi~~~D~~~~~g~~~~~~~p~v~GhE~~G~V~~vG~~   80 (360)
T 1piw_A            3 YPEKFEGIAIQSHE--DWKNPKKTKYDPKPFYDHDIDIKIEACGVCGSDIHCAAGHWGNMKMPLVVGHEIVGKVVKLGPK   80 (360)
T ss_dssp             TTTCEEEEEECCSS--STTSCEEEEECCCCCCTTEEEEEEEEEEECHHHHHHHTTTTSCCCSSEECCCCEEEEEEEECTT
T ss_pred             CChheEEEEEecCC--CCeeEEeccccCCCCCCCeEEEEEEEeccchhhHHHhcCCCCCCCCCcccCcCceEEEEEeCCC
Confidence            45567777765533  3488889  9999999999999999999999999999987665567999999999999999999


Q ss_pred             CC-CCCCCCEEEeccccCCCCCCcccccCCCCCCcchhcccccccCCCCcCCCcceeEEeecCCceEECCCCCCcccccc
Q 018067           85 VS-KFKVGDKVGVGCMVGSCRSCDSCAIDLENYCPKVIMTYANKYHDGTITYGGYSDIMVADEHFVVRIPEGTPLDATAP  163 (361)
Q Consensus        85 v~-~~~~GdrV~~~~~~~~c~~c~~c~~~~~~~c~~~~~~~~~~~~~~~~~~g~~a~~v~v~~~~~~~ip~~~~~~~aa~  163 (361)
                      |+ +|++||||++.+...+|++|.+|++|.++.|++....+.+....|....|+|+||+++++++++++|+++++++||+
T Consensus        81 v~~~~~~GdrV~~~~~~~~cg~C~~C~~g~~~~C~~~~~~~~~~~~~g~~~~G~~aey~~v~~~~~~~iP~~~~~~~aa~  160 (360)
T 1piw_A           81 SNSGLKVGQRVGVGAQVFSCLECDRCKNDNEPYCTKFVTTYSQPYEDGYVSQGGYANYVRVHEHFVVPIPENIPSHLAAP  160 (360)
T ss_dssp             CCSSCCTTCEEEECSEEECCSCSHHHHTTCGGGCTTCEESSSCBCTTSCBCCCSSBSEEEEEGGGEEECCTTSCHHHHGG
T ss_pred             CCCCCCCCCEEEEecCCCCCCCChhhcCCCcccCcchhhccccccCCCccCCCcceeEEEEchhheEECCCCCCHHHhhh
Confidence            99 99999999888777799999999999999998751111111111335679999999999999999999999999999


Q ss_pred             cchhhhhhhhHhhhcCCCCCCCEEEEEcCChHHHHHHHHHHHcCCeEEEEeCCchhHHHHHHHcCCCEEecCCCH-HHHH
Q 018067          164 LLCAGITVYSPLRFYGLDKPGMHVGVVGLGGLGHVAVKFAKAMGVKVTVISTSPSKKSEAIERLGADSFLVSRDQ-DEMQ  242 (361)
Q Consensus       164 l~~~~~ta~~~l~~~~~~~~g~~vlV~Gag~vG~~a~~la~~~g~~vi~~~~~~~~~~~~~~~~g~~~vv~~~~~-~~~~  242 (361)
                      +++++.|||+++++ .++++|++|||+|+|++|++++|+|+.+|++|+++++++++++.+ +++|++++++++++ +...
T Consensus       161 l~~~~~ta~~~l~~-~~~~~g~~VlV~GaG~vG~~~~qlak~~Ga~Vi~~~~~~~~~~~~-~~lGa~~v~~~~~~~~~~~  238 (360)
T 1piw_A          161 LLCGGLTVYSPLVR-NGCGPGKKVGIVGLGGIGSMGTLISKAMGAETYVISRSSRKREDA-MKMGADHYIATLEEGDWGE  238 (360)
T ss_dssp             GGTHHHHHHHHHHH-TTCSTTCEEEEECCSHHHHHHHHHHHHHTCEEEEEESSSTTHHHH-HHHTCSEEEEGGGTSCHHH
T ss_pred             hhhhHHHHHHHHHH-cCCCCCCEEEEECCCHHHHHHHHHHHHCCCEEEEEcCCHHHHHHH-HHcCCCEEEcCcCchHHHH
Confidence            99999999999987 568999999999999999999999999999999999888876555 78999999998776 6666


Q ss_pred             HhcCCccEEEEcCCC--cccHHHHHhccccCCEEEEecCCCCCc-ccChHHHHhCCcEEEecccCCHHHHHHHHHHHHcC
Q 018067          243 AAMGTMDGIIDTVSA--VHPLMPLIGLLKSQGKLVLVGAPEKPL-ELPAFSLLMGRKIVGGSMIGGMKETQEMIDFAAKH  319 (361)
Q Consensus       243 ~~~~g~d~vid~~g~--~~~~~~~~~~l~~~G~~v~~g~~~~~~-~~~~~~~~~~~~~i~g~~~~~~~~~~~~~~ll~~~  319 (361)
                      ++.+++|+|||++|.  ...+..++++++++|+++.+|.... . .++...++.+++++.|+...+.++++++++++++|
T Consensus       239 ~~~~~~D~vid~~g~~~~~~~~~~~~~l~~~G~iv~~g~~~~-~~~~~~~~~~~~~~~i~g~~~~~~~~~~~~~~l~~~g  317 (360)
T 1piw_A          239 KYFDTFDLIVVCASSLTDIDFNIMPKAMKVGGRIVSISIPEQ-HEMLSLKPYGLKAVSISYSALGSIKELNQLLKLVSEK  317 (360)
T ss_dssp             HSCSCEEEEEECCSCSTTCCTTTGGGGEEEEEEEEECCCCCS-SCCEEECGGGCBSCEEEECCCCCHHHHHHHHHHHHHT
T ss_pred             HhhcCCCEEEECCCCCcHHHHHHHHHHhcCCCEEEEecCCCC-ccccCHHHHHhCCeEEEEEecCCHHHHHHHHHHHHhC
Confidence            666799999999998  5558999999999999999998765 4 45566678899999999988889999999999999


Q ss_pred             CCceeEEEEeccc--HHHHHHHHHcCCCceEEEEEeCCcc
Q 018067          320 NIRADIEVIPADY--VNTALERLAKADVRYRFVIDVANTM  357 (361)
Q Consensus       320 ~~~~~~~~~~l~~--~~~a~~~~~~~~~~gkvvi~~~~~~  357 (361)
                      ++++.+++|+|++  +++||+.+.+++..||+|+.++++.
T Consensus       318 ~l~~~i~~~~l~~~~~~~A~~~~~~~~~~gKvvi~~~~~~  357 (360)
T 1piw_A          318 DIKIWVETLPVGEAGVHEAFERMEKGDVRYRFTLVGYDKE  357 (360)
T ss_dssp             TCCCCEEEEESSHHHHHHHHHHHHHTCCSSEEEEECCHHH
T ss_pred             CCcceEEEEeccHhHHHHHHHHHHCCCCceEEEEecCccc
Confidence            9998889999999  9999999999988899999997653

>1rjw_A ADH-HT, alcohol dehydrogenase; oxidoreductase, NAD, zinc, tetramer; 2.35A {Geobacillus stearothermophilus} SCOP: b.35.1.2 c.2.1.1 PDB: 3pii_A

Probab=100.00  E-value=3.2e-59  Score=433.86  Aligned_cols=334  Identities=32%  Similarity=0.597  Sum_probs=295.2

Q ss_pred             cceeeeeecCCCCCccceeeccCCCCCCeEEEEEeeeccCcchHHhHhcCCCC-CCCCCcccccccEEEEEeCCCCCCCC
Q 018067           11 KNAFGWAAKDTSGVLSPFHFSRRATGEKDVTFKVTHCGICHSDLHMIKNEWGN-TIYPIVPGHEIVGVVTEVGSKVSKFK   89 (361)
Q Consensus        11 ~~~~~~~~~~~~~~l~~~~~~~p~~~~~evlV~v~~~~i~~~D~~~~~g~~~~-~~~p~~lG~e~~G~Vv~vG~~v~~~~   89 (361)
                      |+++.+..++  +.++++++|.|+|+++||||||+++|||++|++.+.|.++. ..+|.++|||++|+|+++|++|++|+
T Consensus         1 Mka~~~~~~g--~~l~~~~~~~P~~~~~eVlVkv~a~gi~~~D~~~~~g~~~~~~~~p~v~GhE~~G~V~~vG~~v~~~~   78 (339)
T 1rjw_A            1 MKAAVVEQFK--EPLKIKEVEKPTISYGEVLVRIKACGVCHTDLHAAHGDWPVKPKLPLIPGHEGVGIVEEVGPGVTHLK   78 (339)
T ss_dssp             CEEEEBSSTT--SCCEEEECCCCCCCTTEEEEEEEEEEECHHHHHHHHTCSSSCCCSSBCCCSCEEEEEEEECTTCCSCC
T ss_pred             CeEEEEcCCC--CCcEEEEeeCCCCCCCEEEEEEEEEeEchhhHHHhcCCCCcCCCCCeeccccceEEEEEECCCCCcCC
Confidence            5666664433  25888999999999999999999999999999999986652 36799999999999999999999999


Q ss_pred             CCCEEEeccccCCCCCCcccccCCCCCCcchhcccccccCCCCcCCCcceeEEeecCCceEECCCCCCcccccccchhhh
Q 018067           90 VGDKVGVGCMVGSCRSCDSCAIDLENYCPKVIMTYANKYHDGTITYGGYSDIMVADEHFVVRIPEGTPLDATAPLLCAGI  169 (361)
Q Consensus        90 ~GdrV~~~~~~~~c~~c~~c~~~~~~~c~~~~~~~~~~~~~~~~~~g~~a~~v~v~~~~~~~ip~~~~~~~aa~l~~~~~  169 (361)
                      +||||++.+....||+|.+|++|.++.|++..+.       |...+|+|+||+.+++++++++|+++++++||++++++.
T Consensus        79 vGdrV~~~~~~~~cg~C~~C~~g~~~~C~~~~~~-------g~~~~G~~aey~~v~~~~~~~~P~~~~~~~aa~l~~~~~  151 (339)
T 1rjw_A           79 VGDRVGIPWLYSACGHCDYCLSGQETLCEHQKNA-------GYSVDGGYAEYCRAAADYVVKIPDNLSFEEAAPIFCAGV  151 (339)
T ss_dssp             TTCEEEECSEEECCSCSHHHHTTCGGGCTTCEEB-------TTTBCCSSBSEEEEEGGGCEECCTTSCHHHHGGGGTHHH
T ss_pred             CCCEEEEecCCCCCCCCchhhCcCcccCCCccee-------ecCCCCcceeeEEechHHEEECCCCCCHHHhhhhhhhHH
Confidence            9999998777668999999999999999976432       345689999999999999999999999999999999999


Q ss_pred             hhhhHhhhcCCCCCCCEEEEEcCChHHHHHHHHHHHcCCeEEEEeCCchhHHHHHHHcCCCEEecCCCHH---HHHHhcC
Q 018067          170 TVYSPLRFYGLDKPGMHVGVVGLGGLGHVAVKFAKAMGVKVTVISTSPSKKSEAIERLGADSFLVSRDQD---EMQAAMG  246 (361)
Q Consensus       170 ta~~~l~~~~~~~~g~~vlV~Gag~vG~~a~~la~~~g~~vi~~~~~~~~~~~~~~~~g~~~vv~~~~~~---~~~~~~~  246 (361)
                      |||+++.+. .+++|++|||+|+|++|++++|+|+.+|++|+++++++++++.+ +++|++.++++++++   .+.++++
T Consensus       152 ta~~~l~~~-~~~~g~~VlV~GaG~vG~~~~~~a~~~Ga~Vi~~~~~~~~~~~~-~~lGa~~~~d~~~~~~~~~~~~~~~  229 (339)
T 1rjw_A          152 TTYKALKVT-GAKPGEWVAIYGIGGLGHVAVQYAKAMGLNVVAVDIGDEKLELA-KELGADLVVNPLKEDAAKFMKEKVG  229 (339)
T ss_dssp             HHHHHHHHH-TCCTTCEEEEECCSTTHHHHHHHHHHTTCEEEEECSCHHHHHHH-HHTTCSEEECTTTSCHHHHHHHHHS
T ss_pred             HHHHHHHhc-CCCCCCEEEEECCCHHHHHHHHHHHHcCCEEEEEeCCHHHHHHH-HHCCCCEEecCCCccHHHHHHHHhC
Confidence            999999877 58999999999998899999999999999999999888776555 789999998887543   3334446


Q ss_pred             CccEEEEcCCCcccHHHHHhccccCCEEEEecCCCCCcccChHHHHhCCcEEEecccCCHHHHHHHHHHHHcCCCceeEE
Q 018067          247 TMDGIIDTVSAVHPLMPLIGLLKSQGKLVLVGAPEKPLELPAFSLLMGRKIVGGSMIGGMKETQEMIDFAAKHNIRADIE  326 (361)
Q Consensus       247 g~d~vid~~g~~~~~~~~~~~l~~~G~~v~~g~~~~~~~~~~~~~~~~~~~i~g~~~~~~~~~~~~~~ll~~~~~~~~~~  326 (361)
                      ++|++||++|....+..++++++++|+++.+|...+...++...++.+++++.|+...+.++++++++++.+|++++.++
T Consensus       230 ~~d~vid~~g~~~~~~~~~~~l~~~G~~v~~g~~~~~~~~~~~~~~~~~~~i~g~~~~~~~~~~~~~~l~~~g~l~~~~~  309 (339)
T 1rjw_A          230 GVHAAVVTAVSKPAFQSAYNSIRRGGACVLVGLPPEEMPIPIFDTVLNGIKIIGSIVGTRKDLQEALQFAAEGKVKTIIE  309 (339)
T ss_dssp             SEEEEEESSCCHHHHHHHHHHEEEEEEEEECCCCSSEEEEEHHHHHHTTCEEEECCSCCHHHHHHHHHHHHTTSCCCCEE
T ss_pred             CCCEEEECCCCHHHHHHHHHHhhcCCEEEEecccCCCCccCHHHHHhCCcEEEEeccCCHHHHHHHHHHHHcCCCCccEE
Confidence            89999999998666899999999999999999876666777777888999999999888899999999999999998889


Q ss_pred             EEecccHHHHHHHHHcCCCceEEEEEeCC
Q 018067          327 VIPADYVNTALERLAKADVRYRFVIDVAN  355 (361)
Q Consensus       327 ~~~l~~~~~a~~~~~~~~~~gkvvi~~~~  355 (361)
                      +|+|+++++||+.+.+++..||+|+++++
T Consensus       310 ~~~l~~~~~A~~~~~~~~~~gKvvi~~~~  338 (339)
T 1rjw_A          310 VQPLEKINEVFDRMLKGQINGRVVLTLED  338 (339)
T ss_dssp             EEEGGGHHHHHHHHHTTCCSSEEEEECCC
T ss_pred             EEcHHHHHHHHHHHHcCCCceEEEEecCC
Confidence            99999999999999999878999999864

>1h2b_A Alcohol dehydrogenase; oxidoreductase, archaea, hyperthermophIle, zinc; HET: OCA NAJ; 1.62A {Aeropyrum pernix} SCOP: b.35.1.2 c.2.1.1

Probab=100.00  E-value=6.5e-59  Score=435.00  Aligned_cols=332  Identities=27%  Similarity=0.440  Sum_probs=288.8

Q ss_pred             CcccceeeeeecCCCCCccceeeccCC-CCCCeEEEEEeeeccCcchHHhHhcCCC---CCCCCCcccccccEEEEEeCC
Q 018067            8 EHPKNAFGWAAKDTSGVLSPFHFSRRA-TGEKDVTFKVTHCGICHSDLHMIKNEWG---NTIYPIVPGHEIVGVVTEVGS   83 (361)
Q Consensus         8 ~~~~~~~~~~~~~~~~~l~~~~~~~p~-~~~~evlV~v~~~~i~~~D~~~~~g~~~---~~~~p~~lG~e~~G~Vv~vG~   83 (361)
                      +.+|+++.+..++  +.++++++|.|+ |+++||||||+++|||++|++.+.|.++   ...+|.++|||++|+|+++|+
T Consensus        13 ~~~mka~~~~~~g--~~l~~~~~p~P~~~~~~eVlVkv~a~gi~~~D~~~~~g~~~~~~~~~~p~v~G~E~~G~V~~vG~   90 (359)
T 1h2b_A           13 VERLKAARLHEYN--KPLRIEDVDYPRLEGRFDVIVRIAGAGVCHTDLHLVQGMWHELLQPKLPYTLGHENVGYIEEVAE   90 (359)
T ss_dssp             ----CEEEESSTT--SCCEEECCCCCCCBTTBCEEEEEEEEECCHHHHHHHHTTTHHHHCCCSSEECCCCEEEEEEEECT
T ss_pred             hhhceEEEEecCC--CCcEEEEccCCCCCCCCEEEEEEEEEEecccchHHHhCCCccccCCCCCeecCcCceEEEEEECC
Confidence            3457777765533  358889999999 9999999999999999999999998764   346799999999999999999


Q ss_pred             CCCCCCCCCEEEeccccCCCCCCcccccCCCCCCcchhcccccccCCCCcCCCcceeEEeecCCceEECCCCCCccccc-
Q 018067           84 KVSKFKVGDKVGVGCMVGSCRSCDSCAIDLENYCPKVIMTYANKYHDGTITYGGYSDIMVADEHFVVRIPEGTPLDATA-  162 (361)
Q Consensus        84 ~v~~~~~GdrV~~~~~~~~c~~c~~c~~~~~~~c~~~~~~~~~~~~~~~~~~g~~a~~v~v~~~~~~~ip~~~~~~~aa-  162 (361)
                      +|++|++||||+..+ ..+||+|.+|++|.+++|++....       |....|+|+||+.+++++++++|+++++++|| 
T Consensus        91 ~v~~~~vGdrV~~~~-~~~Cg~C~~C~~g~~~~C~~~~~~-------G~~~~G~~aey~~v~~~~~~~iP~~~~~~~aa~  162 (359)
T 1h2b_A           91 GVEGLEKGDPVILHP-AVTDGTCLACRAGEDMHCENLEFP-------GLNIDGGFAEFMRTSHRSVIKLPKDISREKLVE  162 (359)
T ss_dssp             TCCSCCTTCEEEECS-CBCCSCSHHHHTTCGGGCTTCBCB-------TTTBCCSSBSEEEECGGGEEECCTTCCHHHHHH
T ss_pred             CCCCCCCCCEEEeCC-CCCCCCChhhhCcCcccCCCcccc-------ccCCCCcccceEEechHhEEECCCCCCHHHHhh
Confidence            999999999996654 458999999999999999976321       34568999999999999999999999999998 


Q ss_pred             --ccchhhhhhhhHhhhc-CCCCCCCEEEEEcCChHHHHHHHHHHHc-CCeEEEEeCCchhHHHHHHHcCCCEEecCCCH
Q 018067          163 --PLLCAGITVYSPLRFY-GLDKPGMHVGVVGLGGLGHVAVKFAKAM-GVKVTVISTSPSKKSEAIERLGADSFLVSRDQ  238 (361)
Q Consensus       163 --~l~~~~~ta~~~l~~~-~~~~~g~~vlV~Gag~vG~~a~~la~~~-g~~vi~~~~~~~~~~~~~~~~g~~~vv~~~~~  238 (361)
                        ++++++.|||+++.+. +++++|++|||+|+|++|++++|+|+.+ |++|+++++++++++.+ +++|+++++|++++
T Consensus       163 ~~~l~~~~~ta~~al~~~~~~~~~g~~VlV~GaG~vG~~avqlak~~~Ga~Vi~~~~~~~~~~~~-~~lGa~~vi~~~~~  241 (359)
T 1h2b_A          163 MAPLADAGITAYRAVKKAARTLYPGAYVAIVGVGGLGHIAVQLLKVMTPATVIALDVKEEKLKLA-ERLGADHVVDARRD  241 (359)
T ss_dssp             TGGGGTHHHHHHHHHHHHHTTCCTTCEEEEECCSHHHHHHHHHHHHHCCCEEEEEESSHHHHHHH-HHTTCSEEEETTSC
T ss_pred             ccchhhhHHHHHHHHHhhccCCCCCCEEEEECCCHHHHHHHHHHHHcCCCeEEEEeCCHHHHHHH-HHhCCCEEEeccch
Confidence              8899999999999885 6789999999999999999999999999 99999999887776555 79999999998875


Q ss_pred             --HHHHHhcC--CccEEEEcCCCcc--cHHHHHhccccCCEEEEecCCCCCcccChHHHHhCCcEEEecccCCHHHHHHH
Q 018067          239 --DEMQAAMG--TMDGIIDTVSAVH--PLMPLIGLLKSQGKLVLVGAPEKPLELPAFSLLMGRKIVGGSMIGGMKETQEM  312 (361)
Q Consensus       239 --~~~~~~~~--g~d~vid~~g~~~--~~~~~~~~l~~~G~~v~~g~~~~~~~~~~~~~~~~~~~i~g~~~~~~~~~~~~  312 (361)
                        +.+.++++  ++|++||++|++.  .+..++++  ++|+++.+|..... .++...++.+++++.|+...+.++++++
T Consensus       242 ~~~~v~~~~~g~g~Dvvid~~G~~~~~~~~~~~~~--~~G~~v~~g~~~~~-~~~~~~~~~~~~~i~g~~~~~~~~~~~~  318 (359)
T 1h2b_A          242 PVKQVMELTRGRGVNVAMDFVGSQATVDYTPYLLG--RMGRLIIVGYGGEL-RFPTIRVISSEVSFEGSLVGNYVELHEL  318 (359)
T ss_dssp             HHHHHHHHTTTCCEEEEEESSCCHHHHHHGGGGEE--EEEEEEECCCSSCC-CCCHHHHHHTTCEEEECCSCCHHHHHHH
T ss_pred             HHHHHHHHhCCCCCcEEEECCCCchHHHHHHHhhc--CCCEEEEEeCCCCC-CCCHHHHHhCCcEEEEecCCCHHHHHHH
Confidence              45556653  7999999999984  58888888  99999999986655 6777778889999999998888999999


Q ss_pred             HHHHHcCCCceeEEEEecccHHHHHHHHHcCCCceEEEEEe
Q 018067          313 IDFAAKHNIRADIEVIPADYVNTALERLAKADVRYRFVIDV  353 (361)
Q Consensus       313 ~~ll~~~~~~~~~~~~~l~~~~~a~~~~~~~~~~gkvvi~~  353 (361)
                      ++++++|++++.+++|+|+++++||+.+.+++..||+|+.+
T Consensus       319 ~~l~~~g~l~~~i~~~~l~~~~~A~~~~~~~~~~gKvvv~~  359 (359)
T 1h2b_A          319 VTLALQGKVRVEVDIHKLDEINDVLERLEKGEVLGRAVLIP  359 (359)
T ss_dssp             HHHHHTTSCCCCEEEEEGGGHHHHHHHHHTTCCSSEEEEEC
T ss_pred             HHHHHcCCCcceEEEEeHHHHHHHHHHHHcCCCceEEEeeC
Confidence            99999999998779999999999999999998889999974

>4eez_A Alcohol dehydrogenase 1; site-saturation mutagenesis, directed evolution, isobutyraldehyde, biofuel, oxidoreductase; HET: PG4; 1.90A {Lactococcus lactis subsp} PDB: 4eex_A*

Probab=100.00  E-value=4.5e-59  Score=434.70  Aligned_cols=334  Identities=27%  Similarity=0.506  Sum_probs=301.3

Q ss_pred             cceeeeeecCCCCCccceeeccCCCCCCeEEEEEeeeccCcchHHhHhcCCCCCCCCCcccccccEEEEEeCCCCCCCCC
Q 018067           11 KNAFGWAAKDTSGVLSPFHFSRRATGEKDVTFKVTHCGICHSDLHMIKNEWGNTIYPIVPGHEIVGVVTEVGSKVSKFKV   90 (361)
Q Consensus        11 ~~~~~~~~~~~~~~l~~~~~~~p~~~~~evlV~v~~~~i~~~D~~~~~g~~~~~~~p~~lG~e~~G~Vv~vG~~v~~~~~   90 (361)
                      ||+..+.. .+++.++++++|+|+|+|+||||||+++|||++|++.++|.++. .+|.++|||++|+|+++|++|++|++
T Consensus         1 MKA~v~~~-~~~~~~~l~e~~~P~~~p~eVLVkv~a~gic~~D~~~~~G~~~~-~~p~i~GhE~aG~V~~vG~~V~~~~~   78 (348)
T 4eez_A            1 MKAAVVRH-NPDGYADLVEKELRAIKPNEALLDMEYCGVCHTDLHVAAGDFGN-KAGTVLGHEGIGIVKEIGADVSSLQV   78 (348)
T ss_dssp             CEEEEECS-SCCSSEEEEECCCCCCCTTEEEEEEEEEECCHHHHHHHTTTTCC-CTTCBCCSEEEEEEEEECTTCCSCCT
T ss_pred             CeEEEEEc-CCCCcEEEEEeECCCCCCCEEEEEEEEEEECHHHHHHhcCCCCC-CCCcccceeEEEEEEEECceeeeccc
Confidence            67776643 45677899999999999999999999999999999999998764 68999999999999999999999999


Q ss_pred             CCEEEeccccCCCCCCcccccCCCCCCcchhcccccccCCCCcCCCcceeEEeecCCceEECCCCCCcccccccchhhhh
Q 018067           91 GDKVGVGCMVGSCRSCDSCAIDLENYCPKVIMTYANKYHDGTITYGGYSDIMVADEHFVVRIPEGTPLDATAPLLCAGIT  170 (361)
Q Consensus        91 GdrV~~~~~~~~c~~c~~c~~~~~~~c~~~~~~~~~~~~~~~~~~g~~a~~v~v~~~~~~~ip~~~~~~~aa~l~~~~~t  170 (361)
                      ||||++.+....|+.|.+|..+.++.|......       +...+|+|+||+.++++.++++|+++++++|+++++++.|
T Consensus        79 GdrV~~~~~~~~~g~~~~~~~~~~~~~~~~~~~-------~~~~~G~~ae~~~~~~~~~~~iP~~~~~~~aa~l~~~~~t  151 (348)
T 4eez_A           79 GDRVSVAWFFEGCGHCEYCVSGNETFCREVKNA-------GYSVDGGMAEEAIVVADYAVKVPDGLDPIEASSITCAGVT  151 (348)
T ss_dssp             TCEEEEESEEECCSSSHHHHTTCGGGCTTCEEB-------TTTBCCSSBSEEEEEGGGSCBCCTTSCHHHHHHHHHHHHH
T ss_pred             CCeEeecccccccCccccccCCccccccccccc-------ccccCCcceeeccccccceeecCCCCCHHHHhhcccceee
Confidence            999999999989999999999999999986443       4567899999999999999999999999999999999999


Q ss_pred             hhhHhhhcCCCCCCCEEEEEcCChHHHHHHHHHHHc-CCeEEEEeCCchhHHHHHHHcCCCEEecCCCHH---HHHHhcC
Q 018067          171 VYSPLRFYGLDKPGMHVGVVGLGGLGHVAVKFAKAM-GVKVTVISTSPSKKSEAIERLGADSFLVSRDQD---EMQAAMG  246 (361)
Q Consensus       171 a~~~l~~~~~~~~g~~vlV~Gag~vG~~a~~la~~~-g~~vi~~~~~~~~~~~~~~~~g~~~vv~~~~~~---~~~~~~~  246 (361)
                      ||++++... +++|++|||+|+|++|++++|+|+.. |++|++++++++++ ++++++|++.++|+++++   .+.++++
T Consensus       152 a~~~l~~~~-~~~g~~VlV~GaG~~g~~a~~~a~~~~g~~Vi~~~~~~~r~-~~~~~~Ga~~~i~~~~~~~~~~v~~~t~  229 (348)
T 4eez_A          152 TYKAIKVSG-VKPGDWQVIFGAGGLGNLAIQYAKNVFGAKVIAVDINQDKL-NLAKKIGADVTINSGDVNPVDEIKKITG  229 (348)
T ss_dssp             HHHHHHHHT-CCTTCEEEEECCSHHHHHHHHHHHHTSCCEEEEEESCHHHH-HHHHHTTCSEEEEC-CCCHHHHHHHHTT
T ss_pred             EEeeecccC-CCCCCEEEEEcCCCccHHHHHHHHHhCCCEEEEEECcHHHh-hhhhhcCCeEEEeCCCCCHHHHhhhhcC
Confidence            999997655 79999999999999999999999976 67999999888765 555899999999998754   4445554


Q ss_pred             --CccEEEEcCCCcccHHHHHhccccCCEEEEecCCCCCcccChHHHHhCCcEEEecccCCHHHHHHHHHHHHcCCCcee
Q 018067          247 --TMDGIIDTVSAVHPLMPLIGLLKSQGKLVLVGAPEKPLELPAFSLLMGRKIVGGSMIGGMKETQEMIDFAAKHNIRAD  324 (361)
Q Consensus       247 --g~d~vid~~g~~~~~~~~~~~l~~~G~~v~~g~~~~~~~~~~~~~~~~~~~i~g~~~~~~~~~~~~~~ll~~~~~~~~  324 (361)
                        ++|.+++++++..++..++++++++|+++.+|.......++...++.+++++.|+..++.++++++++++++|++++.
T Consensus       230 g~g~d~~~~~~~~~~~~~~~~~~l~~~G~~v~~g~~~~~~~~~~~~~~~~~~~i~gs~~~~~~~~~~~~~l~~~g~i~p~  309 (348)
T 4eez_A          230 GLGVQSAIVCAVARIAFEQAVASLKPMGKMVAVAVPNTEMTLSVPTVVFDGVEVAGSLVGTRLDLAEAFQFGAEGKVKPI  309 (348)
T ss_dssp             SSCEEEEEECCSCHHHHHHHHHTEEEEEEEEECCCCSCEEEECHHHHHHSCCEEEECCSCCHHHHHHHHHHHHTTSCCCC
T ss_pred             CCCceEEEEeccCcchhheeheeecCCceEEEEeccCCCCccCHHHHHhCCeEEEEEecCCHHHHHHHHHHHHcCCCEEE
Confidence              799999999998889999999999999999998877778888889999999999999999999999999999999988


Q ss_pred             EEEEecccHHHHHHHHHcCCCceEEEEEeCC
Q 018067          325 IEVIPADYVNTALERLAKADVRYRFVIDVAN  355 (361)
Q Consensus       325 ~~~~~l~~~~~a~~~~~~~~~~gkvvi~~~~  355 (361)
                      +++|||+++++||+.+++++..||+||+|+.
T Consensus       310 ~~~~~l~~~~~A~~~l~~g~~~GKvVl~~sk  340 (348)
T 4eez_A          310 VATRKLEEINDIIDEMKAGKIEGRMVIDFTK  340 (348)
T ss_dssp             EEEECGGGHHHHHHHHHTTCCSSEEEEECC-
T ss_pred             EEEEeHHHHHHHHHHHHCCCCccEEEEEccc
Confidence            8999999999999999999999999999964

>3uko_A Alcohol dehydrogenase class-3; alcohol dehydrogenase III, homodimer, reduction of GSNO, NAD binding, oxidoreductase; HET: NAD SO4; 1.40A {Arabidopsis thaliana}

Probab=100.00  E-value=1.6e-58  Score=435.31  Aligned_cols=344  Identities=21%  Similarity=0.316  Sum_probs=290.6

Q ss_pred             CCCcccceeeeeecCCCCCccceeeccCCCCCCeEEEEEeeeccCcchHHhHhcCCCCCCCCCcccccccEEEEEeCCCC
Q 018067            6 EQEHPKNAFGWAAKDTSGVLSPFHFSRRATGEKDVTFKVTHCGICHSDLHMIKNEWGNTIYPIVPGHEIVGVVTEVGSKV   85 (361)
Q Consensus         6 ~~~~~~~~~~~~~~~~~~~l~~~~~~~p~~~~~evlV~v~~~~i~~~D~~~~~g~~~~~~~p~~lG~e~~G~Vv~vG~~v   85 (361)
                      .++.+|+++.+..++.  .++++++|.|+|+++||||||+++|||++|++.++|..+...+|.++|||++|+|+++|++|
T Consensus         4 ~~~~tmkA~v~~~~~~--~l~~~~~~~p~~~~~eVlVkv~a~gi~~~D~~~~~g~~~~~~~P~v~GhE~~G~V~~vG~~v   81 (378)
T 3uko_A            4 GQVITCKAAVAYEPNK--PLVIEDVQVAPPQAGEVRIKILYTALCHTDAYTWSGKDPEGLFPCILGHEAAGIVESVGEGV   81 (378)
T ss_dssp             TSCEEEEEEEBCSTTS--CCEEEEEEECCCCTTEEEEEEEEEEECHHHHHHHTTCCTTCCSSBCCCCEEEEEEEEECTTC
T ss_pred             ccceeeEEEEEecCCC--ccEEEEecCCCCCCCeEEEEEEEeecCHHHHHHhcCCCCCCCCCccCCccceEEEEEeCCCC
Confidence            4566677777654433  38999999999999999999999999999999999987767889999999999999999999


Q ss_pred             CCCCCCCEEEeccccCCCCCCcccccCCCCCCcchhcccccc---------------cCCCCcCCCcceeEEeecCCceE
Q 018067           86 SKFKVGDKVGVGCMVGSCRSCDSCAIDLENYCPKVIMTYANK---------------YHDGTITYGGYSDIMVADEHFVV  150 (361)
Q Consensus        86 ~~~~~GdrV~~~~~~~~c~~c~~c~~~~~~~c~~~~~~~~~~---------------~~~~~~~~g~~a~~v~v~~~~~~  150 (361)
                      ++|++||||++.+.. +||+|.+|++|.+|.|.+.......+               ........|+|+||+.++++.++
T Consensus        82 ~~~~vGdrV~~~~~~-~Cg~C~~C~~g~~~~C~~~~~~~~~G~~~~~g~~~~~~~g~~~~~~~~~G~~aey~~v~~~~~~  160 (378)
T 3uko_A           82 TEVQAGDHVIPCYQA-ECRECKFCKSGKTNLCGKVRSATGVGIMMNDRKSRFSVNGKPIYHFMGTSTFSQYTVVHDVSVA  160 (378)
T ss_dssp             CSCCTTCEEEECSSC-CCSSSHHHHHTSCSCCCSSHHHHTTTCCTTTSSCSEEETTEEEBCCTTTCCSBSEEEEEGGGEE
T ss_pred             CcCCCCCEEEEecCC-CCCCChhhhCcCcCcCcCcccccccccccccCccccccCCcccccccCCcceEeEEEechhheE
Confidence            999999999876654 89999999999999999864321110               00012234799999999999999


Q ss_pred             ECCCCCCcccccccchhhhhhhhHhhhcCCCCCCCEEEEEcCChHHHHHHHHHHHcCC-eEEEEeCCchhHHHHHHHcCC
Q 018067          151 RIPEGTPLDATAPLLCAGITVYSPLRFYGLDKPGMHVGVVGLGGLGHVAVKFAKAMGV-KVTVISTSPSKKSEAIERLGA  229 (361)
Q Consensus       151 ~ip~~~~~~~aa~l~~~~~ta~~~l~~~~~~~~g~~vlV~Gag~vG~~a~~la~~~g~-~vi~~~~~~~~~~~~~~~~g~  229 (361)
                      ++|+++++++||.+++++.|||+++.+..++++|++|||+|+|++|++++|+|+.+|+ +|+++++++++++ +++++|+
T Consensus       161 ~iP~~~~~~~aa~l~~~~~ta~~al~~~~~~~~g~~VlV~GaG~vG~~a~q~a~~~Ga~~Vi~~~~~~~~~~-~a~~lGa  239 (378)
T 3uko_A          161 KIDPTAPLDKVCLLGCGVPTGLGAVWNTAKVEPGSNVAIFGLGTVGLAVAEGAKTAGASRIIGIDIDSKKYE-TAKKFGV  239 (378)
T ss_dssp             ECCTTSCHHHHGGGGTHHHHHHHHHHTTTCCCTTCCEEEECCSHHHHHHHHHHHHHTCSCEEEECSCTTHHH-HHHTTTC
T ss_pred             ECCCCCCHHHhhhhhhhHHHHHHHHHhhcCCCCCCEEEEECCCHHHHHHHHHHHHcCCCeEEEEcCCHHHHH-HHHHcCC
Confidence            9999999999999999999999999888889999999999999999999999999999 8999888887765 5589999


Q ss_pred             CEEecCC--CH---HHHHHhcC-CccEEEEcCCCcccHHHHHhccccC-CEEEEecCCCC--CcccChHHHHhCCcEEEe
Q 018067          230 DSFLVSR--DQ---DEMQAAMG-TMDGIIDTVSAVHPLMPLIGLLKSQ-GKLVLVGAPEK--PLELPAFSLLMGRKIVGG  300 (361)
Q Consensus       230 ~~vv~~~--~~---~~~~~~~~-g~d~vid~~g~~~~~~~~~~~l~~~-G~~v~~g~~~~--~~~~~~~~~~~~~~~i~g  300 (361)
                      +++++++  +.   +.+.++++ ++|+|||++|++.++..++++++++ |+++.+|....  ...++...++. ++++.|
T Consensus       240 ~~vi~~~~~~~~~~~~i~~~~~gg~D~vid~~g~~~~~~~~~~~l~~g~G~iv~~G~~~~~~~~~~~~~~~~~-~~~i~g  318 (378)
T 3uko_A          240 NEFVNPKDHDKPIQEVIVDLTDGGVDYSFECIGNVSVMRAALECCHKGWGTSVIVGVAASGQEISTRPFQLVT-GRVWKG  318 (378)
T ss_dssp             CEEECGGGCSSCHHHHHHHHTTSCBSEEEECSCCHHHHHHHHHTBCTTTCEEEECSCCCTTCCEEECTHHHHT-TCEEEE
T ss_pred             cEEEccccCchhHHHHHHHhcCCCCCEEEECCCCHHHHHHHHHHhhccCCEEEEEcccCCCCccccCHHHHhc-CcEEEE
Confidence            9999886  32   34555544 8999999999977699999999996 99999998643  34566666554 899999


Q ss_pred             cccC---CHHHHHHHHHHHHcCCCcee--E-EEEecccHHHHHHHHHcCCCceEEEEEeCC
Q 018067          301 SMIG---GMKETQEMIDFAAKHNIRAD--I-EVIPADYVNTALERLAKADVRYRFVIDVAN  355 (361)
Q Consensus       301 ~~~~---~~~~~~~~~~ll~~~~~~~~--~-~~~~l~~~~~a~~~~~~~~~~gkvvi~~~~  355 (361)
                      +..+   ..++++++++++.+|++++.  + ++|||+++++||+.+.+++.. |+|+++++
T Consensus       319 ~~~~~~~~~~~~~~~~~l~~~g~l~~~~~i~~~~~l~~~~~A~~~~~~g~~~-Kvvi~~~~  378 (378)
T 3uko_A          319 TAFGGFKSRTQVPWLVEKYMNKEIKVDEYITHNLTLGEINKAFDLLHEGTCL-RCVLDTSK  378 (378)
T ss_dssp             CSGGGCCHHHHHHHHHHHHHTTSSCCGGGEEEEEEGGGHHHHHHHTTCTTCS-EEEEETTC
T ss_pred             EEecCCCchHHHHHHHHHHHcCCCChhHheeeEeeHHHHHHHHHHHHCCCce-EEEEecCC
Confidence            8764   45789999999999998753  4 899999999999999998865 99999864

>3jv7_A ADH-A; dehydrogenase, nucleotide binding, rossmann-fold, oxidoreduc; HET: NAD; 2.00A {Rhodococcus ruber} PDB: 2xaa_A*

Probab=100.00  E-value=2.5e-58  Score=429.05  Aligned_cols=334  Identities=26%  Similarity=0.381  Sum_probs=292.1

Q ss_pred             cceeeeeecCCCCCccceeeccCCCCCCeEEEEEeeeccCcchHHhHhcCCCC--CCCCCcccccccEEEEEeCCCCCCC
Q 018067           11 KNAFGWAAKDTSGVLSPFHFSRRATGEKDVTFKVTHCGICHSDLHMIKNEWGN--TIYPIVPGHEIVGVVTEVGSKVSKF   88 (361)
Q Consensus        11 ~~~~~~~~~~~~~~l~~~~~~~p~~~~~evlV~v~~~~i~~~D~~~~~g~~~~--~~~p~~lG~e~~G~Vv~vG~~v~~~   88 (361)
                      |+++.+..+++|  ++++++|.|+|+++||||||++++||++|++.++|..+.  ..+|.++|||++|+|+++|++|++|
T Consensus         1 MkA~~~~~~g~~--l~~~~~~~P~~~~~eVlVkv~a~gi~~~D~~~~~g~~~~~~~~~p~i~G~e~~G~V~~vG~~v~~~   78 (345)
T 3jv7_A            1 MKAVQYTEIGSE--PVVVDIPTPTPGPGEILLKVTAAGLCHSDIFVMDMPAAQYAYGLPLTLGHEGVGTVAELGEGVTGF   78 (345)
T ss_dssp             CEEEEECSTTSC--CEEEECCCCCCCTTCEEEEEEEEECCHHHHHHHHSCTTTCCSCSSEECCSEEEEEEEEECTTCCSC
T ss_pred             CeEEEEcCCCCc--eEEEEecCCCCCCCeEEEEEEEEeeCHHHHHHHcCCCCccCCCCCcccCcccEEEEEEECCCCCCC
Confidence            677777654443  889999999999999999999999999999999987542  4778999999999999999999999


Q ss_pred             CCCCEEEeccccCCCCCCcccccCCCCCC-cchhcccccccCCCCcCCCcceeEEeec-CCceEECCCCCCcccccccch
Q 018067           89 KVGDKVGVGCMVGSCRSCDSCAIDLENYC-PKVIMTYANKYHDGTITYGGYSDIMVAD-EHFVVRIPEGTPLDATAPLLC  166 (361)
Q Consensus        89 ~~GdrV~~~~~~~~c~~c~~c~~~~~~~c-~~~~~~~~~~~~~~~~~~g~~a~~v~v~-~~~~~~ip~~~~~~~aa~l~~  166 (361)
                      ++||||++.+.. +|++|.+|.++.+++| .+..+.+   ...+...+|+|+||+.++ ++.++++|+ +++++||++++
T Consensus        79 ~vGdrV~~~~~~-~cg~C~~c~~g~~~~c~~~~~~~~---~~~g~~~~G~~aey~~v~~~~~~~~~p~-~~~~~aa~l~~  153 (345)
T 3jv7_A           79 GVGDAVAVYGPW-GCGACHACARGRENYCTRAADLGI---TPPGLGSPGSMAEYMIVDSARHLVPIGD-LDPVAAAPLTD  153 (345)
T ss_dssp             CTTCEEEECCSC-CCSSSHHHHTTCGGGCSSHHHHTC---CCBTTTBCCSSBSEEEESCGGGEEECTT-CCHHHHGGGGT
T ss_pred             CCCCEEEEecCC-CCCCChHHHCcCcCcCcccccccc---ccCCcCCCceeeEEEEecchhceEeCCC-CCHHHhhhhhh
Confidence            999999987765 9999999999999999 4433321   112445789999999999 999999999 99999999999


Q ss_pred             hhhhhhhHhhh-cCCCCCCCEEEEEcCChHHHHHHHHHHHc-CCeEEEEeCCchhHHHHHHHcCCCEEecCCC--HHHHH
Q 018067          167 AGITVYSPLRF-YGLDKPGMHVGVVGLGGLGHVAVKFAKAM-GVKVTVISTSPSKKSEAIERLGADSFLVSRD--QDEMQ  242 (361)
Q Consensus       167 ~~~ta~~~l~~-~~~~~~g~~vlV~Gag~vG~~a~~la~~~-g~~vi~~~~~~~~~~~~~~~~g~~~vv~~~~--~~~~~  242 (361)
                      ++.|||+++.+ ...+++|++|||+|+|++|++++|+|+.+ +++|+++++++++++ +++++|++.++++++  .+.+.
T Consensus       154 ~~~ta~~~l~~~~~~~~~g~~vlv~GaG~vG~~a~qla~~~g~~~Vi~~~~~~~~~~-~~~~lGa~~~i~~~~~~~~~v~  232 (345)
T 3jv7_A          154 AGLTPYHAISRVLPLLGPGSTAVVIGVGGLGHVGIQILRAVSAARVIAVDLDDDRLA-LAREVGADAAVKSGAGAADAIR  232 (345)
T ss_dssp             TTHHHHHHHHTTGGGCCTTCEEEEECCSHHHHHHHHHHHHHCCCEEEEEESCHHHHH-HHHHTTCSEEEECSTTHHHHHH
T ss_pred             hHHHHHHHHHHhccCCCCCCEEEEECCCHHHHHHHHHHHHcCCCEEEEEcCCHHHHH-HHHHcCCCEEEcCCCcHHHHHH
Confidence            99999999998 45689999999999999999999999998 679999988887765 558999999998876  23444


Q ss_pred             HhcC--CccEEEEcCCCcccHHHHHhccccCCEEEEecCCCC-CcccChHHHHhCCcEEEecccCCHHHHHHHHHHHHcC
Q 018067          243 AAMG--TMDGIIDTVSAVHPLMPLIGLLKSQGKLVLVGAPEK-PLELPAFSLLMGRKIVGGSMIGGMKETQEMIDFAAKH  319 (361)
Q Consensus       243 ~~~~--g~d~vid~~g~~~~~~~~~~~l~~~G~~v~~g~~~~-~~~~~~~~~~~~~~~i~g~~~~~~~~~~~~~~ll~~~  319 (361)
                      ++++  ++|+|||++|++.++..++++++++|+++.+|.... ...++. .++.+++++.++...+.++++++++++++|
T Consensus       233 ~~t~g~g~d~v~d~~G~~~~~~~~~~~l~~~G~iv~~G~~~~~~~~~~~-~~~~~~~~i~g~~~~~~~~~~~~~~l~~~g  311 (345)
T 3jv7_A          233 ELTGGQGATAVFDFVGAQSTIDTAQQVVAVDGHISVVGIHAGAHAKVGF-FMIPFGASVVTPYWGTRSELMEVVALARAG  311 (345)
T ss_dssp             HHHGGGCEEEEEESSCCHHHHHHHHHHEEEEEEEEECSCCTTCCEEEST-TTSCTTCEEECCCSCCHHHHHHHHHHHHTT
T ss_pred             HHhCCCCCeEEEECCCCHHHHHHHHHHHhcCCEEEEECCCCCCCCCcCH-HHHhCCCEEEEEecCCHHHHHHHHHHHHcC
Confidence            5554  899999999998669999999999999999998765 556664 778899999999999999999999999999


Q ss_pred             CCceeEEEEecccHHHHHHHHHcCCCceEEEEEe
Q 018067          320 NIRADIEVIPADYVNTALERLAKADVRYRFVIDV  353 (361)
Q Consensus       320 ~~~~~~~~~~l~~~~~a~~~~~~~~~~gkvvi~~  353 (361)
                      ++++.+++|+|+++++||+.+.+++..||+|+.+
T Consensus       312 ~l~~~~~~~~l~~~~~A~~~~~~~~~~Gkvvv~p  345 (345)
T 3jv7_A          312 RLDIHTETFTLDEGPAAYRRLREGSIRGRGVVVP  345 (345)
T ss_dssp             CCCCCEEEECSTTHHHHHHHHHHTCCSSEEEECC
T ss_pred             CCceEEEEEcHHHHHHHHHHHHcCCCceeEEeCC
Confidence            9999779999999999999999999999999864

>2h6e_A ADH-4, D-arabinose 1-dehydrogenase; rossman fold, medium chain alcohol dehydrogenase, oxidoreduc; 1.80A {Sulfolobus solfataricus}

Probab=100.00  E-value=1.4e-58  Score=430.60  Aligned_cols=330  Identities=27%  Similarity=0.355  Sum_probs=272.4

Q ss_pred             ccceeeeeecCCCCCccceeeccCCCCCCeEEEEEeeeccCcchHHhHhcCCC--CCCCCCcccccccEEEEEeCCCCCC
Q 018067           10 PKNAFGWAAKDTSGVLSPFHFSRRATGEKDVTFKVTHCGICHSDLHMIKNEWG--NTIYPIVPGHEIVGVVTEVGSKVSK   87 (361)
Q Consensus        10 ~~~~~~~~~~~~~~~l~~~~~~~p~~~~~evlV~v~~~~i~~~D~~~~~g~~~--~~~~p~~lG~e~~G~Vv~vG~~v~~   87 (361)
                      +|+++.+..++  +.++++++|.|+|+++||||||+++|||++|++.+.|.++  ...+|.++|||++|+|+++|++ ++
T Consensus         3 ~mka~~~~~~g--~~l~~~~~~~P~~~~~eVlVkv~a~gi~~~D~~~~~g~~~~~~~~~p~i~G~E~~G~V~~vG~~-~~   79 (344)
T 2h6e_A            3 KSKAALLKKFS--EPLSIEDVNIPEPQGEEVLIRIGGAGVCRTDLRVWKGVEAKQGFRLPIILGHENAGTIVEVGEL-AK   79 (344)
T ss_dssp             EEEBCEECSCC--C-----EEEECCCCTTCEEEEEEEEECCHHHHHHHTTSCCCTTCCSSEECCCCEEEEEEEECTT-CC
T ss_pred             eeEEEEEecCC--CCCeEEEeeCCCCCCCEEEEEEEEEEechhhHHHHcCCCcccCCCCCccccccceEEEEEECCC-CC
Confidence            68887775543  3588899999999999999999999999999999998765  3467999999999999999999 99


Q ss_pred             CCCCCEEEeccccCCCCCCcccccCCCCCCcchhcccccccCCCCcCCCcceeEEeec-CCceEECCCCCCcccccccch
Q 018067           88 FKVGDKVGVGCMVGSCRSCDSCAIDLENYCPKVIMTYANKYHDGTITYGGYSDIMVAD-EHFVVRIPEGTPLDATAPLLC  166 (361)
Q Consensus        88 ~~~GdrV~~~~~~~~c~~c~~c~~~~~~~c~~~~~~~~~~~~~~~~~~g~~a~~v~v~-~~~~~~ip~~~~~~~aa~l~~  166 (361)
                      |++||||+..+ ..+||+|.+|++|.+++|++....       |....|+|+||+++| +++++++ +++++++||++++
T Consensus        80 ~~~GdrV~~~~-~~~Cg~C~~C~~g~~~~C~~~~~~-------G~~~~G~~aey~~v~~~~~~~~i-~~l~~~~aa~l~~  150 (344)
T 2h6e_A           80 VKKGDNVVVYA-TWGDLTCRYCREGKFNICKNQIIP-------GQTTNGGFSEYMLVKSSRWLVKL-NSLSPVEAAPLAD  150 (344)
T ss_dssp             CCTTCEEEECS-CBCCSCSTTGGGTCGGGCTTCBCB-------TTTBCCSSBSEEEESCGGGEEEE-SSSCHHHHGGGGT
T ss_pred             CCCCCEEEECC-CCCCCCChhhhCCCcccCCCcccc-------ccccCCcceeeEEecCcccEEEe-CCCCHHHhhhhhh
Confidence            99999996554 448999999999999999975321       335689999999999 9999999 9999999999999


Q ss_pred             hhhhhhhHhhhc----CCCCCCCEEEEEcCChHHHHHHHHHHHc--CCeEEEEeCCchhHHHHHHHcCCCEEecCCC-HH
Q 018067          167 AGITVYSPLRFY----GLDKPGMHVGVVGLGGLGHVAVKFAKAM--GVKVTVISTSPSKKSEAIERLGADSFLVSRD-QD  239 (361)
Q Consensus       167 ~~~ta~~~l~~~----~~~~~g~~vlV~Gag~vG~~a~~la~~~--g~~vi~~~~~~~~~~~~~~~~g~~~vv~~~~-~~  239 (361)
                      ++.|||+++++.    +++ +|++|||+|+|++|++++|+|+.+  |++|+++++++++++.+ +++|+++++++++ ++
T Consensus       151 ~~~ta~~al~~~~~~~~~~-~g~~VlV~GaG~vG~~aiqlak~~~~Ga~Vi~~~~~~~~~~~~-~~lGa~~vi~~~~~~~  228 (344)
T 2h6e_A          151 AGTTSMGAIRQALPFISKF-AEPVVIVNGIGGLAVYTIQILKALMKNITIVGISRSKKHRDFA-LELGADYVSEMKDAES  228 (344)
T ss_dssp             HHHHHHHHHHHHHHHHTTC-SSCEEEEECCSHHHHHHHHHHHHHCTTCEEEEECSCHHHHHHH-HHHTCSEEECHHHHHH
T ss_pred             hhHHHHHHHHhhhhcccCC-CCCEEEEECCCHHHHHHHHHHHHhcCCCEEEEEeCCHHHHHHH-HHhCCCEEeccccchH
Confidence            999999999876    368 999999999999999999999999  99999998887776554 7899999998877 66


Q ss_pred             HHHHhcC--CccEEEEcCCCcccHHHHHhccccCCEEEEecCCCCCcccChHHHHhCCcEEEecccCCHHHHHHHHHHHH
Q 018067          240 EMQAAMG--TMDGIIDTVSAVHPLMPLIGLLKSQGKLVLVGAPEKPLELPAFSLLMGRKIVGGSMIGGMKETQEMIDFAA  317 (361)
Q Consensus       240 ~~~~~~~--g~d~vid~~g~~~~~~~~~~~l~~~G~~v~~g~~~~~~~~~~~~~~~~~~~i~g~~~~~~~~~~~~~~ll~  317 (361)
                      .+.+++.  ++|+|||++|+...+..++++++++|+++.+|.......++...++.+++++.|+...+.++++++++++.
T Consensus       229 ~~~~~~~g~g~D~vid~~g~~~~~~~~~~~l~~~G~iv~~g~~~~~~~~~~~~~~~~~~~i~g~~~~~~~~~~~~~~l~~  308 (344)
T 2h6e_A          229 LINKLTDGLGASIAIDLVGTEETTYNLGKLLAQEGAIILVGMEGKRVSLEAFDTAVWNKKLLGSNYGSLNDLEDVVRLSE  308 (344)
T ss_dssp             HHHHHHTTCCEEEEEESSCCHHHHHHHHHHEEEEEEEEECCCCSSCCCCCHHHHHHTTCEEEECCSCCHHHHHHHHHHHH
T ss_pred             HHHHhhcCCCccEEEECCCChHHHHHHHHHhhcCCEEEEeCCCCCCcccCHHHHhhCCcEEEEEecCCHHHHHHHHHHHH
Confidence            6666663  79999999999855999999999999999999876666777778888999999999888899999999999


Q ss_pred             cCCCceeEEEEecccHHHHHHHHHcCCCceEEEEEe
Q 018067          318 KHNIRADIEVIPADYVNTALERLAKADVRYRFVIDV  353 (361)
Q Consensus       318 ~~~~~~~~~~~~l~~~~~a~~~~~~~~~~gkvvi~~  353 (361)
                      +|++++.+++|+|+++++||+.+++++..||+|+.+
T Consensus       309 ~g~i~~~i~~~~l~~~~~A~~~~~~~~~~gKvvl~~  344 (344)
T 2h6e_A          309 SGKIKPYIIKVPLDDINKAFTNLDEGRVDGRQVITP  344 (344)
T ss_dssp             TTSSCCCEEEECC----------------CEEEECC
T ss_pred             cCCCCcceEEEeHHHHHHHHHHHHcCCCceEEEEeC
Confidence            999998779999999999999999988789999864

>1e3i_A Alcohol dehydrogenase, class II; HET: NAD; 2.08A {Mus musculus} SCOP: b.35.1.2 c.2.1.1 PDB: 1e3e_A* 1e3l_A* 3cos_A*

Probab=100.00  E-value=1.7e-57  Score=428.11  Aligned_cols=342  Identities=22%  Similarity=0.363  Sum_probs=285.8

Q ss_pred             CCcccceeeeeecCCCCCccceeeccCCCCCCeEEEEEeeeccCcchHHhHhcCCCCCCCCCcccccccEEEEEeCCCCC
Q 018067            7 QEHPKNAFGWAAKDTSGVLSPFHFSRRATGEKDVTFKVTHCGICHSDLHMIKNEWGNTIYPIVPGHEIVGVVTEVGSKVS   86 (361)
Q Consensus         7 ~~~~~~~~~~~~~~~~~~l~~~~~~~p~~~~~evlV~v~~~~i~~~D~~~~~g~~~~~~~p~~lG~e~~G~Vv~vG~~v~   86 (361)
                      +++||++.++...+..+.++++++|.|+|+++||||||+++|||++|++.+.|. +...+|.++|||++|+|+++|++|+
T Consensus         3 ~~~p~~mka~~~~~~g~~l~~~~~~~p~~~~~eVlVkv~a~gi~~~D~~~~~g~-~~~~~P~v~GhE~~G~V~~vG~~v~   81 (376)
T 1e3i_A            3 QGKVIKCKAAIAWKTGSPLCIEEIEVSPPKACEVRIQVIATCVCPTDINATDPK-KKALFPVVLGHECAGIVESVGPGVT   81 (376)
T ss_dssp             TTSCEEEEEEEBCSTTSCCEEEEEEECCCCTTEEEEEEEEEECCHHHHHTTCTT-SCCCSSBCCCCEEEEEEEEECTTCC
T ss_pred             CCCChheeEEEEecCCCCeEEEEeeCCCCCCCeEEEEEeEEeEchhhHHHhcCC-CCCCCCcccCccccEEEEEECCCCc
Confidence            455666666655433335889999999999999999999999999999998886 4456899999999999999999999


Q ss_pred             CCCCCCEEEeccccCCCCCCcccccCCCCCCcchh----ccc-ccccCC-------------CCcCCCcceeEEeecCCc
Q 018067           87 KFKVGDKVGVGCMVGSCRSCDSCAIDLENYCPKVI----MTY-ANKYHD-------------GTITYGGYSDIMVADEHF  148 (361)
Q Consensus        87 ~~~~GdrV~~~~~~~~c~~c~~c~~~~~~~c~~~~----~~~-~~~~~~-------------~~~~~g~~a~~v~v~~~~  148 (361)
                      +|++||||++.+.. +||+|.+|++|.++.|.+..    +.. .+....             +....|+|+||++++++.
T Consensus        82 ~~~vGdrV~~~~~~-~Cg~C~~C~~g~~~~C~~~~~~~~~~~~~G~~~~g~~~~~~~g~~~~~~~~~G~~aey~~v~~~~  160 (376)
T 1e3i_A           82 NFKPGDKVIPFFAP-QCKRCKLCLSPLTNLCGKLRNFKYPTIDQELMEDRTSRFTCKGRSIYHFMGVSSFSQYTVVSEAN  160 (376)
T ss_dssp             SCCTTCEEEECSSC-CCSSSHHHHCTTCCCCTTCCCSSCGGGSSCSCTTSCCSEEETTEEEBCCTTTCCSBSEEEEEGGG
T ss_pred             cCCCCCEEEECCcC-CCCCCccccCCCcccCcCcCccccccccccccccCccccccCCcccccccCCccceeEEEecccc
Confidence            99999999887655 89999999999999999754    100 010000             111359999999999999


Q ss_pred             eEECCCCCCcccccccchhhhhhhhHhhhcCCCCCCCEEEEEcCChHHHHHHHHHHHcCC-eEEEEeCCchhHHHHHHHc
Q 018067          149 VVRIPEGTPLDATAPLLCAGITVYSPLRFYGLDKPGMHVGVVGLGGLGHVAVKFAKAMGV-KVTVISTSPSKKSEAIERL  227 (361)
Q Consensus       149 ~~~ip~~~~~~~aa~l~~~~~ta~~~l~~~~~~~~g~~vlV~Gag~vG~~a~~la~~~g~-~vi~~~~~~~~~~~~~~~~  227 (361)
                      ++++|+++++++||.+++++.|||+++.+..++++|++|||+|+|++|++++|+|+.+|+ +|+++++++++++.+ +++
T Consensus       161 ~~~iP~~l~~~~aa~l~~~~~ta~~~l~~~~~~~~g~~VlV~GaG~vG~~aiqlak~~Ga~~Vi~~~~~~~~~~~a-~~l  239 (376)
T 1e3i_A          161 LARVDDEANLERVCLIGCGFSSGYGAAINTAKVTPGSTCAVFGLGCVGLSAIIGCKIAGASRIIAIDINGEKFPKA-KAL  239 (376)
T ss_dssp             EEECCTTCCHHHHGGGGTHHHHHHHHHHTTSCCCTTCEEEEECCSHHHHHHHHHHHHTTCSEEEEECSCGGGHHHH-HHT
T ss_pred             EEECCCCCCHHHhhhhccHHHHHHHHHHHhcCCCCCCEEEEECCCHHHHHHHHHHHHcCCCeEEEEcCCHHHHHHH-HHh
Confidence            999999999999999999999999999777889999999999999999999999999999 898888887776554 899


Q ss_pred             CCCEEecCCC--H---HHHHHhc-CCccEEEEcCCCcccHHHHHhccccC-CEEEEecCCCCCcccChHHHHhCCcEEEe
Q 018067          228 GADSFLVSRD--Q---DEMQAAM-GTMDGIIDTVSAVHPLMPLIGLLKSQ-GKLVLVGAPEKPLELPAFSLLMGRKIVGG  300 (361)
Q Consensus       228 g~~~vv~~~~--~---~~~~~~~-~g~d~vid~~g~~~~~~~~~~~l~~~-G~~v~~g~~~~~~~~~~~~~~~~~~~i~g  300 (361)
                      |+++++++++  +   +.+.+++ +++|+|||++|+..++..++++++++ |+++.+|.......++...++.++ ++.|
T Consensus       240 Ga~~vi~~~~~~~~~~~~v~~~~~~g~Dvvid~~G~~~~~~~~~~~l~~~~G~iv~~G~~~~~~~~~~~~~~~~~-~i~g  318 (376)
T 1e3i_A          240 GATDCLNPRELDKPVQDVITELTAGGVDYSLDCAGTAQTLKAAVDCTVLGWGSCTVVGAKVDEMTIPTVDVILGR-SING  318 (376)
T ss_dssp             TCSEEECGGGCSSCHHHHHHHHHTSCBSEEEESSCCHHHHHHHHHTBCTTTCEEEECCCSSSEEEEEHHHHHTTC-EEEE
T ss_pred             CCcEEEccccccchHHHHHHHHhCCCccEEEECCCCHHHHHHHHHHhhcCCCEEEEECCCCCccccCHHHhhccC-eEEE
Confidence            9999998763  2   3344444 38999999999866689999999999 999999985555667777778888 9999


Q ss_pred             cccC---CHHHHHHHHHHHHcCCCce--eE-EEEecccHHHHHHHHHcCCCceEEEEEe
Q 018067          301 SMIG---GMKETQEMIDFAAKHNIRA--DI-EVIPADYVNTALERLAKADVRYRFVIDV  353 (361)
Q Consensus       301 ~~~~---~~~~~~~~~~ll~~~~~~~--~~-~~~~l~~~~~a~~~~~~~~~~gkvvi~~  353 (361)
                      +..+   ..++++++++++++|++++  .+ ++|||+++++||+.+++++. +|+|+++
T Consensus       319 ~~~~~~~~~~~~~~~~~l~~~g~i~~~~~i~~~~~l~~~~~A~~~~~~~~~-~Kvvi~~  376 (376)
T 1e3i_A          319 TFFGGWKSVDSVPNLVSDYKNKKFDLDLLVTHALPFESINDAIDLMKEGKS-IRTILTF  376 (376)
T ss_dssp             CSGGGCCHHHHHHHHHHHHHTTSSCGGGGEEEEEEGGGHHHHHHHHHTTCC-SEEEEEC
T ss_pred             EecCCCCcHHHHHHHHHHHHcCCCCcHHhEeeeecHHHHHHHHHHHhcCCc-ceEEEeC
Confidence            8754   3578999999999999874  44 89999999999999998874 7999874

>2hcy_A Alcohol dehydrogenase 1; tetramer of asymmetric dimers, zinc coordination, intramolec disulfide bonds, oxidoreductase; HET: 8ID; 2.44A {Saccharomyces cerevisiae}

Probab=100.00  E-value=6.9e-58  Score=426.31  Aligned_cols=337  Identities=28%  Similarity=0.512  Sum_probs=294.7

Q ss_pred             CCcccceeeeeecCCCCCccceeeccCCCCCCeEEEEEeeeccCcchHHhHhcCCCC-CCCCCcccccccEEEEEeCCCC
Q 018067            7 QEHPKNAFGWAAKDTSGVLSPFHFSRRATGEKDVTFKVTHCGICHSDLHMIKNEWGN-TIYPIVPGHEIVGVVTEVGSKV   85 (361)
Q Consensus         7 ~~~~~~~~~~~~~~~~~~l~~~~~~~p~~~~~evlV~v~~~~i~~~D~~~~~g~~~~-~~~p~~lG~e~~G~Vv~vG~~v   85 (361)
                      +|.+|+++.+..++  +.++++++|.|+|+++||||||+++|||++|++.+.|.++. ..+|.++|||++|+|+++|++|
T Consensus         2 ~p~~mka~~~~~~g--~~l~~~~~~~P~~~~~eVlVkv~a~gi~~~D~~~~~g~~~~~~~~p~v~G~E~~G~V~~vG~~v   79 (347)
T 2hcy_A            2 IPETQKGVIFYESH--GKLEYKDIPVPKPKANELLINVKYSGVCHTDLHAWHGDWPLPVKLPLVGGHEGAGVVVGMGENV   79 (347)
T ss_dssp             CCSEEEEEEESSTT--CCCEEEEEECCCCCTTEEEEEEEEEEECHHHHHHHHTCSSSCCCSSEECCCEEEEEEEEECTTC
T ss_pred             CCcccEEEEEeCCC--CCCEEEEeeCCCCCCCEEEEEEEEEEechhHHHHhcCCCCCCCCCCcccCccceEEEEEECCCC
Confidence            45578887775543  25888999999999999999999999999999999986652 4678999999999999999999


Q ss_pred             CCCCCCCEEEeccccCCCCCCcccccCCCCCCcchhcccccccCCCCcCCCcceeEEeecCCceEECCCCCCcccccccc
Q 018067           86 SKFKVGDKVGVGCMVGSCRSCDSCAIDLENYCPKVIMTYANKYHDGTITYGGYSDIMVADEHFVVRIPEGTPLDATAPLL  165 (361)
Q Consensus        86 ~~~~~GdrV~~~~~~~~c~~c~~c~~~~~~~c~~~~~~~~~~~~~~~~~~g~~a~~v~v~~~~~~~ip~~~~~~~aa~l~  165 (361)
                      ++|++||||++.+....||+|.+|++|.+++|++....       |...+|+|+||+.+++++++++|+++++++||+++
T Consensus        80 ~~~~~GdrV~~~~~~~~cg~C~~C~~g~~~~C~~~~~~-------g~~~~G~~aey~~v~~~~~~~iP~~~~~~~aa~l~  152 (347)
T 2hcy_A           80 KGWKIGDYAGIKWLNGSCMACEYCELGNESNCPHADLS-------GYTHDGSFQQYATADAVQAAHIPQGTDLAQVAPIL  152 (347)
T ss_dssp             CSCCTTCEEEECSEEECCSSSTTTTTTCGGGCTTCEEB-------TTTBCCSSBSEEEEETTTSEEECTTCCHHHHGGGG
T ss_pred             CCCcCCCEEEEecCCCCCCCChhhhCCCcccCcccccc-------ccCCCCcceeEEEeccccEEECCCCCCHHHHHHHh
Confidence            99999999998776667999999999999999976432       34568999999999999999999999999999999


Q ss_pred             hhhhhhhhHhhhcCCCCCCCEEEEEcC-ChHHHHHHHHHHHcCCeEEEEeCCchhHHHHHHHcCCCEEecCCC-H---HH
Q 018067          166 CAGITVYSPLRFYGLDKPGMHVGVVGL-GGLGHVAVKFAKAMGVKVTVISTSPSKKSEAIERLGADSFLVSRD-Q---DE  240 (361)
Q Consensus       166 ~~~~ta~~~l~~~~~~~~g~~vlV~Ga-g~vG~~a~~la~~~g~~vi~~~~~~~~~~~~~~~~g~~~vv~~~~-~---~~  240 (361)
                      +.+.|||+++++. ++++|++|||+|+ |++|++++|+++..|++|+++++++++.+ .++++|++.++|+.+ +   +.
T Consensus       153 ~~~~ta~~~l~~~-~~~~g~~vlV~Ga~ggiG~~~~~~a~~~Ga~V~~~~~~~~~~~-~~~~~g~~~~~d~~~~~~~~~~  230 (347)
T 2hcy_A          153 CAGITVYKALKSA-NLMAGHWVAISGAAGGLGSLAVQYAKAMGYRVLGIDGGEGKEE-LFRSIGGEVFIDFTKEKDIVGA  230 (347)
T ss_dssp             THHHHHHHHHHTT-TCCTTCEEEEETTTSHHHHHHHHHHHHTTCEEEEEECSTTHHH-HHHHTTCCEEEETTTCSCHHHH
T ss_pred             hhHHHHHHHHHhc-CCCCCCEEEEECCCchHHHHHHHHHHHCCCcEEEEcCCHHHHH-HHHHcCCceEEecCccHhHHHH
Confidence            9999999999876 6899999999998 99999999999999999999998887764 447899998888763 2   23


Q ss_pred             HHHhcC-CccEEEEcCCCcccHHHHHhccccCCEEEEecCCCC-CcccChHHHHhCCcEEEecccCCHHHHHHHHHHHHc
Q 018067          241 MQAAMG-TMDGIIDTVSAVHPLMPLIGLLKSQGKLVLVGAPEK-PLELPAFSLLMGRKIVGGSMIGGMKETQEMIDFAAK  318 (361)
Q Consensus       241 ~~~~~~-g~d~vid~~g~~~~~~~~~~~l~~~G~~v~~g~~~~-~~~~~~~~~~~~~~~i~g~~~~~~~~~~~~~~ll~~  318 (361)
                      +.+++. ++|++||++|....+..+++.++++|+++.+|...+ ...++...++.+++++.|+...+.++++++++++++
T Consensus       231 ~~~~~~~~~D~vi~~~g~~~~~~~~~~~l~~~G~iv~~g~~~~~~~~~~~~~~~~~~~~i~g~~~~~~~~~~~~~~l~~~  310 (347)
T 2hcy_A          231 VLKATDGGAHGVINVSVSEAAIEASTRYVRANGTTVLVGMPAGAKCCSDVFNQVVKSISIVGSYVGNRADTREALDFFAR  310 (347)
T ss_dssp             HHHHHTSCEEEEEECSSCHHHHHHHTTSEEEEEEEEECCCCTTCEEEEEHHHHHHTTCEEEECCCCCHHHHHHHHHHHHT
T ss_pred             HHHHhCCCCCEEEECCCcHHHHHHHHHHHhcCCEEEEEeCCCCCCCCCCHHHHhhCCcEEEEccCCCHHHHHHHHHHHHh
Confidence            344333 799999999986668999999999999999998653 356777778889999999998888999999999999


Q ss_pred             CCCceeEEEEecccHHHHHHHHHcCCCceEEEEEeC
Q 018067          319 HNIRADIEVIPADYVNTALERLAKADVRYRFVIDVA  354 (361)
Q Consensus       319 ~~~~~~~~~~~l~~~~~a~~~~~~~~~~gkvvi~~~  354 (361)
                      |++++.+++|||+++++||+.+++++..||+|+.++
T Consensus       311 g~l~~~~~~~~l~~~~~A~~~~~~~~~~gKvvv~~~  346 (347)
T 2hcy_A          311 GLVKSPIKVVGLSTLPEIYEKMEKGQIVGRYVVDTS  346 (347)
T ss_dssp             TSCCCCEEEEEGGGHHHHHHHHHTTCCSSEEEEESC
T ss_pred             CCCccceEEEcHHHHHHHHHHHHcCCcceeEEEecC
Confidence            999988899999999999999999887899999875

>1p0f_A NADP-dependent alcohol dehydrogenase; ADH topology, NADP(H)-dependent, oxidoreductase; HET: NAP; 1.80A {Rana perezi} SCOP: b.35.1.2 c.2.1.1 PDB: 1p0c_A*

Probab=100.00  E-value=4.7e-57  Score=424.72  Aligned_cols=339  Identities=25%  Similarity=0.354  Sum_probs=281.9

Q ss_pred             cccceeeeeecCCCCCccceeeccCCCCCCeEEEEEeeeccCcchHHhHhcCCCCCCCCCcccccccEEEEEeCCCCCCC
Q 018067            9 HPKNAFGWAAKDTSGVLSPFHFSRRATGEKDVTFKVTHCGICHSDLHMIKNEWGNTIYPIVPGHEIVGVVTEVGSKVSKF   88 (361)
Q Consensus         9 ~~~~~~~~~~~~~~~~l~~~~~~~p~~~~~evlV~v~~~~i~~~D~~~~~g~~~~~~~p~~lG~e~~G~Vv~vG~~v~~~   88 (361)
                      .||++.++...+..+.++++++|.|+|+++||||||+++|||++|++.++|..+ ..+|.++|||++|+|+++|++|++|
T Consensus         6 ~p~~mka~~~~~~g~~l~~~~~~~p~~~~~eVlVkv~a~gi~~~D~~~~~g~~~-~~~P~v~GhE~~G~V~~vG~~v~~~   84 (373)
T 1p0f_A            6 KDITCKAAVAWEPHKPLSLETITVAPPKAHEVRIKILASGICGSDSSVLKEIIP-SKFPVILGHEAVGVVESIGAGVTCV   84 (373)
T ss_dssp             SCEEEEEEEBSSTTSCCEEEEEEECCCCTTEEEEEEEEEECCHHHHHHHTTSSC-CCSSBCCCCCEEEEEEEECTTCCSC
T ss_pred             CcceeEEEEEEcCCCCeeEEEeeCCCCCCCeEEEEEeEEeecchhHHHhcCCCC-CCCCcccCcCceEEEEEECCCCCcc
Confidence            344444444432223588999999999999999999999999999999998765 5679999999999999999999999


Q ss_pred             CCCCEEEeccccCCCCCCcccccCCCCCCcchhcccc-cccC-------------CCCcCCCcceeEEeecCCceEECCC
Q 018067           89 KVGDKVGVGCMVGSCRSCDSCAIDLENYCPKVIMTYA-NKYH-------------DGTITYGGYSDIMVADEHFVVRIPE  154 (361)
Q Consensus        89 ~~GdrV~~~~~~~~c~~c~~c~~~~~~~c~~~~~~~~-~~~~-------------~~~~~~g~~a~~v~v~~~~~~~ip~  154 (361)
                      ++||||++.+.. +||+|.+|++|.+|.|++....+. +...             .+....|+|+||+++++++++++|+
T Consensus        85 ~vGdrV~~~~~~-~Cg~C~~C~~g~~~~C~~~~~~~~~G~~~~g~~~~~~~g~~~~~~~~~G~~aey~~v~~~~~~~iP~  163 (373)
T 1p0f_A           85 KPGDKVIPLFVP-QCGSCRACKSSNSNFCEKNDMGAKTGLMADMTSRFTCRGKPIYNLMGTSTFTEYTVVADIAVAKIDP  163 (373)
T ss_dssp             CTTCEEEECSSC-CCSSSHHHHCTTCCCCTTCSTTTCCCSCTTSCCSEEETTEEEBCSTTTCCSBSEEEEETTSEEEECT
T ss_pred             CCCCEEEECCCC-CCCCChhhcCCCcCcCcCCCcccccccccCCccccccCCcccccccCCccceeEEEEchhhEEECCC
Confidence            999999887654 899999999999999998643211 1000             0112359999999999999999999


Q ss_pred             CCCcccccccchhhhhhhhHhhhcCCCCCCCEEEEEcCChHHHHHHHHHHHcCC-eEEEEeCCchhHHHHHHHcCCCEEe
Q 018067          155 GTPLDATAPLLCAGITVYSPLRFYGLDKPGMHVGVVGLGGLGHVAVKFAKAMGV-KVTVISTSPSKKSEAIERLGADSFL  233 (361)
Q Consensus       155 ~~~~~~aa~l~~~~~ta~~~l~~~~~~~~g~~vlV~Gag~vG~~a~~la~~~g~-~vi~~~~~~~~~~~~~~~~g~~~vv  233 (361)
                      +++++ ||.+++++.|||+++.+.+++++|++|||+|+|++|++++|+|+++|+ +|+++++++++++. ++++|+++++
T Consensus       164 ~l~~~-aa~l~~~~~ta~~~l~~~~~~~~g~~VlV~GaG~vG~~aiqlak~~Ga~~Vi~~~~~~~~~~~-a~~lGa~~vi  241 (373)
T 1p0f_A          164 KAPLE-SCLIGCGFATGYGAAVNTAKVTPGSTCAVFGLGGVGFSAIVGCKAAGASRIIGVGTHKDKFPK-AIELGATECL  241 (373)
T ss_dssp             TCCGG-GGGGGTHHHHHHHHHHTTTCCCTTCEEEEECCSHHHHHHHHHHHHHTCSEEEEECSCGGGHHH-HHHTTCSEEE
T ss_pred             CCChh-hhhhhhHHHHHHHHHHhccCCCCCCEEEEECCCHHHHHHHHHHHHcCCCeEEEECCCHHHHHH-HHHcCCcEEE
Confidence            99999 999999999999999877889999999999999999999999999999 78888888777654 4899999999


Q ss_pred             cCCC--H---HHHHHhcC-CccEEEEcCCCcccHHHHHhccccC-CEEEEecCCCC--CcccChHHHHhCCcEEEecccC
Q 018067          234 VSRD--Q---DEMQAAMG-TMDGIIDTVSAVHPLMPLIGLLKSQ-GKLVLVGAPEK--PLELPAFSLLMGRKIVGGSMIG  304 (361)
Q Consensus       234 ~~~~--~---~~~~~~~~-g~d~vid~~g~~~~~~~~~~~l~~~-G~~v~~g~~~~--~~~~~~~~~~~~~~~i~g~~~~  304 (361)
                      ++++  .   +.+.++++ ++|+|||++|...++..++++++++ |+++.+|....  ...++...++.++ ++.|+...
T Consensus       242 ~~~~~~~~~~~~i~~~t~gg~Dvvid~~g~~~~~~~~~~~l~~~~G~iv~~G~~~~~~~~~~~~~~~~~~~-~i~g~~~~  320 (373)
T 1p0f_A          242 NPKDYDKPIYEVICEKTNGGVDYAVECAGRIETMMNALQSTYCGSGVTVVLGLASPNERLPLDPLLLLTGR-SLKGSVFG  320 (373)
T ss_dssp             CGGGCSSCHHHHHHHHTTSCBSEEEECSCCHHHHHHHHHTBCTTTCEEEECCCCCTTCCEEECTHHHHTTC-EEEECSGG
T ss_pred             ecccccchHHHHHHHHhCCCCCEEEECCCCHHHHHHHHHHHhcCCCEEEEEccCCCCCccccCHHHhccCc-eEEeeccC
Confidence            8763  2   34445543 8999999999866689999999999 99999997653  3566777777788 99998653


Q ss_pred             --CHHHHHHHHHHHHcCCCce--eE-EEEecccHHHHHHHHHcCCCceEEEEEe
Q 018067          305 --GMKETQEMIDFAAKHNIRA--DI-EVIPADYVNTALERLAKADVRYRFVIDV  353 (361)
Q Consensus       305 --~~~~~~~~~~ll~~~~~~~--~~-~~~~l~~~~~a~~~~~~~~~~gkvvi~~  353 (361)
                        ..++++++++++++|++++  .+ ++|||+++++||+.+++++. +|+|+.+
T Consensus       321 ~~~~~~~~~~~~l~~~g~i~~~~~i~~~~~l~~~~~A~~~~~~~~~-~kvvi~~  373 (373)
T 1p0f_A          321 GFKGEEVSRLVDDYMKKKINVNFLVSTKLTLDQINKAFELLSSGQG-VRSIMIY  373 (373)
T ss_dssp             GCCGGGHHHHHHHHHTTSSCGGGGEEEEECGGGHHHHHHHTTTSSC-SEEEEEC
T ss_pred             CcCHHHHHHHHHHHHcCCCCchheEEEEeeHHHHHHHHHHHHCCCc-ceEEEeC
Confidence              2468999999999999874  44 89999999999999988875 7999874

>4ej6_A Putative zinc-binding dehydrogenase; structural genomics, nysgrc, PSI-biology, NEW YORK structura genomics research consortium; 1.89A {Sinorhizobium meliloti} PDB: 4ejm_A*

Probab=100.00  E-value=2e-58  Score=433.17  Aligned_cols=337  Identities=23%  Similarity=0.347  Sum_probs=288.0

Q ss_pred             CCCCCcccceeeeeecCCCCCccceeeccCCCCCCeEEEEEeeeccCcchHHhHhcCCCCCCCCCcccccccEEEEEeCC
Q 018067            4 APEQEHPKNAFGWAAKDTSGVLSPFHFSRRATGEKDVTFKVTHCGICHSDLHMIKNEWGNTIYPIVPGHEIVGVVTEVGS   83 (361)
Q Consensus         4 ~~~~~~~~~~~~~~~~~~~~~l~~~~~~~p~~~~~evlV~v~~~~i~~~D~~~~~g~~~~~~~p~~lG~e~~G~Vv~vG~   83 (361)
                      .+.+|.+|+++.+..   ++.++++++|.|+|+++||||||++++||++|++.++|.++ ..+|.++|||++|+|+++|+
T Consensus        17 ~~~~p~~mkA~v~~~---~~~l~~~~~~~P~~~~~eVlVkv~a~gi~~~D~~~~~G~~~-~~~p~v~G~e~~G~V~~vG~   92 (370)
T 4ej6_A           17 NLYFQSMMKAVRLES---VGNISVRNVGIPEPGPDDLLVKVEACGICGTDRHLLHGEFP-STPPVTLGHEFCGIVVEAGS   92 (370)
T ss_dssp             ----CCEEEEEEEEE---TTEEEEEEEECCCCCTTEEEEEEEEEECCHHHHHHHTTSSC-CCSSEECCCSEEEEEEEECT
T ss_pred             ccccchheEEEEEec---CCceEEEEccCCCCCCCeEEEEEEEEeecHHHHHHHcCCCC-CCCCeecCcceEEEEEEECC
Confidence            345667788877754   45799999999999999999999999999999999999764 47799999999999999999


Q ss_pred             CCCCCCCCCEEEeccccCCCCCCcccccCCCCCCcchhcccccccCCCCcCCCcceeEEeecCCceEECCCCCCcccccc
Q 018067           84 KVSKFKVGDKVGVGCMVGSCRSCDSCAIDLENYCPKVIMTYANKYHDGTITYGGYSDIMVADEHFVVRIPEGTPLDATAP  163 (361)
Q Consensus        84 ~v~~~~~GdrV~~~~~~~~c~~c~~c~~~~~~~c~~~~~~~~~~~~~~~~~~g~~a~~v~v~~~~~~~ip~~~~~~~aa~  163 (361)
                      +|++|++||||++.+.. +|+.|.+|++|.++.|.+....       |...+|+|+||++++++.++++|+++++++|| 
T Consensus        93 ~v~~~~vGdrV~~~~~~-~cg~C~~C~~g~~~~C~~~~~~-------g~~~~G~~aey~~v~~~~~~~~P~~~~~~~aa-  163 (370)
T 4ej6_A           93 AVRDIAPGARITGDPNI-SCGRCPQCQAGRVNLCRNLRAI-------GIHRDGGFAEYVLVPRKQAFEIPLTLDPVHGA-  163 (370)
T ss_dssp             TCCSSCTTCEEEECCEE-CCSSSHHHHTTCGGGCTTCEEB-------TTTBCCSSBSEEEEEGGGEEEECTTSCTTGGG-
T ss_pred             CCCCCCCCCEEEECCCC-CCCCChHHhCcCcccCCCcccc-------CCCCCCcceEEEEEchhhEEECCCCCCHHHHh-
Confidence            99999999999988764 9999999999999999986432       44578999999999999999999999999998 


Q ss_pred             cchhhhhhhhHhhhcCCCCCCCEEEEEcCChHHHHHHHHHHHcCC-eEEEEeCCchhHHHHHHHcCCCEEecCCCHHHHH
Q 018067          164 LLCAGITVYSPLRFYGLDKPGMHVGVVGLGGLGHVAVKFAKAMGV-KVTVISTSPSKKSEAIERLGADSFLVSRDQDEMQ  242 (361)
Q Consensus       164 l~~~~~ta~~~l~~~~~~~~g~~vlV~Gag~vG~~a~~la~~~g~-~vi~~~~~~~~~~~~~~~~g~~~vv~~~~~~~~~  242 (361)
                      +..++.+||+++. ..++++|++|||+|+|++|++++|+|+.+|+ +|++++++++++ ++++++|++.++++++.+...
T Consensus       164 l~~~~~ta~~~l~-~~~~~~g~~VlV~GaG~vG~~aiqlak~~Ga~~Vi~~~~~~~~~-~~a~~lGa~~vi~~~~~~~~~  241 (370)
T 4ej6_A          164 FCEPLACCLHGVD-LSGIKAGSTVAILGGGVIGLLTVQLARLAGATTVILSTRQATKR-RLAEEVGATATVDPSAGDVVE  241 (370)
T ss_dssp             GHHHHHHHHHHHH-HHTCCTTCEEEEECCSHHHHHHHHHHHHTTCSEEEEECSCHHHH-HHHHHHTCSEEECTTSSCHHH
T ss_pred             hhhHHHHHHHHHH-hcCCCCCCEEEEECCCHHHHHHHHHHHHcCCCEEEEECCCHHHH-HHHHHcCCCEEECCCCcCHHH
Confidence            7778999999995 4558999999999999999999999999999 788777776655 566899999999987765444


Q ss_pred             Hh------c-CCccEEEEcCCCcccHHHHHhccccCCEEEEecCCCC--CcccChHHHHhCCcEEEecccCCHHHHHHHH
Q 018067          243 AA------M-GTMDGIIDTVSAVHPLMPLIGLLKSQGKLVLVGAPEK--PLELPAFSLLMGRKIVGGSMIGGMKETQEMI  313 (361)
Q Consensus       243 ~~------~-~g~d~vid~~g~~~~~~~~~~~l~~~G~~v~~g~~~~--~~~~~~~~~~~~~~~i~g~~~~~~~~~~~~~  313 (361)
                      .+      + +++|+|||++|+..++..++++++++|+++.+|....  ...++...++.+++++.|++... +++++++
T Consensus       242 ~i~~~~~~~~gg~Dvvid~~G~~~~~~~~~~~l~~~G~vv~~G~~~~~~~~~~~~~~~~~~~~~i~g~~~~~-~~~~~~~  320 (370)
T 4ej6_A          242 AIAGPVGLVPGGVDVVIECAGVAETVKQSTRLAKAGGTVVILGVLPQGEKVEIEPFDILFRELRVLGSFINP-FVHRRAA  320 (370)
T ss_dssp             HHHSTTSSSTTCEEEEEECSCCHHHHHHHHHHEEEEEEEEECSCCCTTCCCCCCHHHHHHTTCEEEECCSCT-TCHHHHH
T ss_pred             HHHhhhhccCCCCCEEEECCCCHHHHHHHHHHhccCCEEEEEeccCCCCccccCHHHHHhCCcEEEEeccCh-HHHHHHH
Confidence            32      2 3799999999987769999999999999999998654  56788888999999999998766 5699999


Q ss_pred             HHHHcCCCce--eE-EEEecccHHHHHHHHHcCC-CceEEEEEeCCc
Q 018067          314 DFAAKHNIRA--DI-EVIPADYVNTALERLAKAD-VRYRFVIDVANT  356 (361)
Q Consensus       314 ~ll~~~~~~~--~~-~~~~l~~~~~a~~~~~~~~-~~gkvvi~~~~~  356 (361)
                      +++++|++++  .+ ++|||+++++||+.+.+++ ..+|+++++++-
T Consensus       321 ~l~~~g~i~~~~~i~~~~~l~~~~~A~~~~~~~~~~~~kvv~~~~~i  367 (370)
T 4ej6_A          321 DLVATGAIEIDRMISRRISLDEAPDVISNPAAAGEVKVLVIPSAERV  367 (370)
T ss_dssp             HHHHTTCSCCGGGEEEEECGGGHHHHHHSCCCTTCSEEEECCC----
T ss_pred             HHHHcCCCChhHcEEEEEEHHHHHHHHHHHHcCCCCeEEEEEccccc
Confidence            9999999964  35 8999999999999998877 448999988754

>2fzw_A Alcohol dehydrogenase class III CHI chain; S-nitrosoglutathione reductase, glutathione-dependent formaldehyde dehydrogenase, oxidoreductase; HET: NAD; 1.84A {Homo sapiens} SCOP: b.35.1.2 c.2.1.1 PDB: 3qj5_A* 1mc5_A* 2fze_A* 1m6w_A* 1ma0_A* 1mp0_A* 1teh_A* 1m6h_A*

Probab=100.00  E-value=3.9e-57  Score=425.40  Aligned_cols=340  Identities=21%  Similarity=0.321  Sum_probs=284.2

Q ss_pred             ccceeeeeecCCCCCccceeeccCCCCCCeEEEEEeeeccCcchHHhHhcCCCCCCCCCcccccccEEEEEeCCCCCCCC
Q 018067           10 PKNAFGWAAKDTSGVLSPFHFSRRATGEKDVTFKVTHCGICHSDLHMIKNEWGNTIYPIVPGHEIVGVVTEVGSKVSKFK   89 (361)
Q Consensus        10 ~~~~~~~~~~~~~~~l~~~~~~~p~~~~~evlV~v~~~~i~~~D~~~~~g~~~~~~~p~~lG~e~~G~Vv~vG~~v~~~~   89 (361)
                      ||++.++...+..+.++++++|.|+|+++||||||+++|||++|++.+.|..+...+|.++|||++|+|+++|++|++|+
T Consensus         4 p~~mkA~~~~~~~~~l~~~~~~~p~~~~~eVlVkv~a~gi~~~D~~~~~g~~~~~~~P~v~GhE~~G~V~~vG~~V~~~~   83 (373)
T 2fzw_A            4 VIKCKAAVAWEAGKPLSIEEIEVAPPKAHEVRIKIIATAVCHTDAYTLSGADPEGCFPVILGHLGAGIVESVGEGVTKLK   83 (373)
T ss_dssp             CEEEEEEEBCSTTSCCEEEEEEECCCCTTEEEEEEEEEECCHHHHHHHHTCCTTCCSSBCCCCEEEEEEEEECTTCCSCC
T ss_pred             ccceEEEEEecCCCCcEEEEeeCCCCCCCEEEEEEEEEEEchhhHHHhcCCCCCCCCCccccccccEEEEEECCCCCCCC
Confidence            44444444433333588899999999999999999999999999999999766557899999999999999999999999


Q ss_pred             CCCEEEeccccCCCCCCcccccCCCCCCcchhcccc-ccc-------------CCCCcCCCcceeEEeecCCceEECCCC
Q 018067           90 VGDKVGVGCMVGSCRSCDSCAIDLENYCPKVIMTYA-NKY-------------HDGTITYGGYSDIMVADEHFVVRIPEG  155 (361)
Q Consensus        90 ~GdrV~~~~~~~~c~~c~~c~~~~~~~c~~~~~~~~-~~~-------------~~~~~~~g~~a~~v~v~~~~~~~ip~~  155 (361)
                      +||||++.+.. +||+|.+|++|.+|.|++...... +..             ..+....|+|+||++++++.++++|++
T Consensus        84 vGdrV~~~~~~-~Cg~C~~C~~g~~~~C~~~~~~~~~g~~~~g~~~~~~~g~~~~~~~~~G~~aey~~v~~~~~~~iP~~  162 (373)
T 2fzw_A           84 AGDTVIPLYIP-QCGECKFCLNPKTNLCQKIRVTQGKGLMPDGTSRFTCKGKTILHYMGTSTFSEYTVVADISVAKIDPL  162 (373)
T ss_dssp             TTCEEEECSSC-CCSCSHHHHCTTCCCCCTTHHHHHTTCCTTSCCSEEETTEEEBCCTTTCCSBSEEEEEGGGEEECCTT
T ss_pred             CCCEEEECCCC-CCCCChHHcCcCcccCCCcccccccccccCCcccccccccccccccCCccceeEEEEchhheEECCCC
Confidence            99999887654 899999999999999998643110 000             011123699999999999999999999


Q ss_pred             CCcccccccchhhhhhhhHhhhcCCCCCCCEEEEEcCChHHHHHHHHHHHcCC-eEEEEeCCchhHHHHHHHcCCCEEec
Q 018067          156 TPLDATAPLLCAGITVYSPLRFYGLDKPGMHVGVVGLGGLGHVAVKFAKAMGV-KVTVISTSPSKKSEAIERLGADSFLV  234 (361)
Q Consensus       156 ~~~~~aa~l~~~~~ta~~~l~~~~~~~~g~~vlV~Gag~vG~~a~~la~~~g~-~vi~~~~~~~~~~~~~~~~g~~~vv~  234 (361)
                      +++++||.+++++.|||+++.+..++++|++|||+|+|++|++++|+|+.+|+ +|+++++++++++.+ +++|++++++
T Consensus       163 l~~~~aa~l~~~~~ta~~~l~~~~~~~~g~~VlV~GaG~vG~~avqla~~~Ga~~Vi~~~~~~~~~~~~-~~lGa~~vi~  241 (373)
T 2fzw_A          163 APLDKVCLLGCGISTGYGAAVNTAKLEPGSVCAVFGLGGVGLAVIMGCKVAGASRIIGVDINKDKFARA-KEFGATECIN  241 (373)
T ss_dssp             SCHHHHGGGGTHHHHHHHHHHTTTCCCTTCEEEEECCSHHHHHHHHHHHHHTCSEEEEECSCGGGHHHH-HHHTCSEEEC
T ss_pred             CCHHHHhhhccHHHHHHHHHHhhcCCCCCCEEEEECCCHHHHHHHHHHHHcCCCeEEEEcCCHHHHHHH-HHcCCceEec
Confidence            99999999999999999999777889999999999999999999999999999 788888887776544 7899999998


Q ss_pred             CCC--H---HHHHHhcC-CccEEEEcCCCcccHHHHHhccccC-CEEEEecCCCC--CcccChHHHHhCCcEEEecccC-
Q 018067          235 SRD--Q---DEMQAAMG-TMDGIIDTVSAVHPLMPLIGLLKSQ-GKLVLVGAPEK--PLELPAFSLLMGRKIVGGSMIG-  304 (361)
Q Consensus       235 ~~~--~---~~~~~~~~-g~d~vid~~g~~~~~~~~~~~l~~~-G~~v~~g~~~~--~~~~~~~~~~~~~~~i~g~~~~-  304 (361)
                      +++  .   +.+.++++ ++|++||++|....+..++++++++ |+++.+|....  ...++...++.++ ++.|+..+ 
T Consensus       242 ~~~~~~~~~~~v~~~~~~g~D~vid~~g~~~~~~~~~~~l~~~~G~iv~~G~~~~~~~~~~~~~~~~~~~-~i~g~~~~~  320 (373)
T 2fzw_A          242 PQDFSKPIQEVLIEMTDGGVDYSFECIGNVKVMRAALEACHKGWGVSVVVGVAASGEEIATRPFQLVTGR-TWKGTAFGG  320 (373)
T ss_dssp             GGGCSSCHHHHHHHHTTSCBSEEEECSCCHHHHHHHHHTBCTTTCEEEECSCCCTTCCEEECTHHHHTTC-EEEECSGGG
T ss_pred             cccccccHHHHHHHHhCCCCCEEEECCCcHHHHHHHHHhhccCCcEEEEEecCCCCceeeeCHHHHhcCC-EEEEeccCC
Confidence            764  2   34445543 7999999999976689999999999 99999997653  3566777777788 99998654 


Q ss_pred             --CHHHHHHHHHHHHcCCCce--eE-EEEecccHHHHHHHHHcCCCceEEEEEe
Q 018067          305 --GMKETQEMIDFAAKHNIRA--DI-EVIPADYVNTALERLAKADVRYRFVIDV  353 (361)
Q Consensus       305 --~~~~~~~~~~ll~~~~~~~--~~-~~~~l~~~~~a~~~~~~~~~~gkvvi~~  353 (361)
                        ..++++++++++++|++++  .+ ++|||+++++||+.+++++. +|+|+.+
T Consensus       321 ~~~~~~~~~~~~l~~~g~l~~~~~i~~~~~l~~~~~A~~~~~~~~~-~kvvi~~  373 (373)
T 2fzw_A          321 WKSVESVPKLVSEYMSKKIKVDEFVTHNLSFDEINKAFELMHSGKS-IRTVVKI  373 (373)
T ss_dssp             CCHHHHHHHHHHHHHTTSSCSGGGEEEEEEGGGHHHHHHHHHHTCC-SEEEEEC
T ss_pred             CCcHHHHHHHHHHHHcCCCCchheEeEEeeHHHHHHHHHHHhCCCc-ceEEEeC
Confidence              2578999999999999874  44 89999999999999998875 7999874

>2eih_A Alcohol dehydrogenase; zinc ION binding protein, structural genomics, NPPSFA, natio project on protein structural and functional analyses; 2.30A {Thermus thermophilus}

Probab=100.00  E-value=1.1e-57  Score=424.20  Aligned_cols=333  Identities=23%  Similarity=0.321  Sum_probs=293.2

Q ss_pred             cceeeeeecCCCCCccceeeccCCCCCCeEEEEEeeeccCcchHHhHhcCCCC-CCCCCcccccccEEEEEeCCCCCCCC
Q 018067           11 KNAFGWAAKDTSGVLSPFHFSRRATGEKDVTFKVTHCGICHSDLHMIKNEWGN-TIYPIVPGHEIVGVVTEVGSKVSKFK   89 (361)
Q Consensus        11 ~~~~~~~~~~~~~~l~~~~~~~p~~~~~evlV~v~~~~i~~~D~~~~~g~~~~-~~~p~~lG~e~~G~Vv~vG~~v~~~~   89 (361)
                      |+++.+..++.|+.+++++++.|+|+++||||||+++|||++|++.+.|.++. ..+|.++|||++|+|+++|++|++|+
T Consensus         1 Mka~~~~~~g~~~~l~~~~~~~P~~~~~eVlVkv~a~gi~~~D~~~~~g~~~~~~~~p~v~G~E~~G~V~~vG~~v~~~~   80 (343)
T 2eih_A            1 MRAVVMRARGGPEVLEVADLPVPEPGPKEVRVRLKAAALNHLDVWVRKGVASPKLPLPHVLGADGSGVVDAVGPGVEGFA   80 (343)
T ss_dssp             CEEEEECSSSSGGGEEEEECCCCCCCTTEEEEEEEEEECCHHHHHHHHTSSSTTCCSSEECCSEEEEEEEEECSSCCSCC
T ss_pred             CeEEEEecCCCCceEEEEecCCCCCCCCEEEEEEEEEEeCHHHHHHhcCCCCCCCCCCcccccceEEEEEEECCCCCCCC
Confidence            67777766666666888999999999999999999999999999999986653 36789999999999999999999999


Q ss_pred             CCCEEEeccccCCCCCCcccccCCCCCCcchhcccccccCCCCcCCCcceeEEeecCCceEECCCCCCcccccccchhhh
Q 018067           90 VGDKVGVGCMVGSCRSCDSCAIDLENYCPKVIMTYANKYHDGTITYGGYSDIMVADEHFVVRIPEGTPLDATAPLLCAGI  169 (361)
Q Consensus        90 ~GdrV~~~~~~~~c~~c~~c~~~~~~~c~~~~~~~~~~~~~~~~~~g~~a~~v~v~~~~~~~ip~~~~~~~aa~l~~~~~  169 (361)
                      +||||++.+. .+|++|.+|++|.+|+|++..+.       |....|+|+||+.++++.++++|+++++++||++++++.
T Consensus        81 vGdrV~~~~~-~~cg~c~~C~~g~~~~C~~~~~~-------G~~~~G~~aey~~v~~~~~~~~P~~~~~~~aa~l~~~~~  152 (343)
T 2eih_A           81 PGDEVVINPG-LSCGRCERCLAGEDNLCPRYQIL-------GEHRHGTYAEYVVLPEANLAPKPKNLSFEEAAAIPLTFL  152 (343)
T ss_dssp             TTCEEEECCE-ECCSCSHHHHTTCGGGCTTCEET-------TTSSCCSSBSEEEEEGGGEEECCTTSCHHHHHHSHHHHH
T ss_pred             CCCEEEECCC-CCcccchhhccCccccccccccc-------CcCCCccceeEEEeChHHeEECCCCCCHHHHhhchhhHH
Confidence            9999998884 59999999999999999986432       334579999999999999999999999999999999999


Q ss_pred             hhhhHhhhcCCCCCCCEEEEEcC-ChHHHHHHHHHHHcCCeEEEEeCCchhHHHHHHHcCCCEEecCCCHH---HHHHhc
Q 018067          170 TVYSPLRFYGLDKPGMHVGVVGL-GGLGHVAVKFAKAMGVKVTVISTSPSKKSEAIERLGADSFLVSRDQD---EMQAAM  245 (361)
Q Consensus       170 ta~~~l~~~~~~~~g~~vlV~Ga-g~vG~~a~~la~~~g~~vi~~~~~~~~~~~~~~~~g~~~vv~~~~~~---~~~~~~  245 (361)
                      |||+++.+.+++++|++|||+|+ |++|++++|+|+..|++|+++++++++++.+ +++|++.++++++++   .+.+++
T Consensus       153 ta~~al~~~~~~~~g~~vlV~Gasg~iG~~~~~~a~~~G~~Vi~~~~~~~~~~~~-~~~ga~~~~d~~~~~~~~~~~~~~  231 (343)
T 2eih_A          153 TAWQMVVDKLGVRPGDDVLVMAAGSGVSVAAIQIAKLFGARVIATAGSEDKLRRA-KALGADETVNYTHPDWPKEVRRLT  231 (343)
T ss_dssp             HHHHHHTTTSCCCTTCEEEECSTTSTTHHHHHHHHHHTTCEEEEEESSHHHHHHH-HHHTCSEEEETTSTTHHHHHHHHT
T ss_pred             HHHHHHHHhcCCCCCCEEEEECCCchHHHHHHHHHHHCCCEEEEEeCCHHHHHHH-HhcCCCEEEcCCcccHHHHHHHHh
Confidence            99999988777899999999998 9999999999999999999999988776655 789999888887654   344444


Q ss_pred             C--CccEEEEcCCCcccHHHHHhccccCCEEEEecCCCCC-cccChHHHHhCCcEEEecccCCHHHHHHHHHHHHcCCCc
Q 018067          246 G--TMDGIIDTVSAVHPLMPLIGLLKSQGKLVLVGAPEKP-LELPAFSLLMGRKIVGGSMIGGMKETQEMIDFAAKHNIR  322 (361)
Q Consensus       246 ~--g~d~vid~~g~~~~~~~~~~~l~~~G~~v~~g~~~~~-~~~~~~~~~~~~~~i~g~~~~~~~~~~~~~~ll~~~~~~  322 (361)
                      +  ++|++||++|. ..+..++++++++|+++.+|..... ..++...++.+++++.|+.....++++++++++++|+++
T Consensus       232 ~~~~~d~vi~~~g~-~~~~~~~~~l~~~G~~v~~g~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~l~~~g~l~  310 (343)
T 2eih_A          232 GGKGADKVVDHTGA-LYFEGVIKATANGGRIAIAGASSGYEGTLPFAHVFYRQLSILGSTMASKSRLFPILRFVEEGKLK  310 (343)
T ss_dssp             TTTCEEEEEESSCS-SSHHHHHHHEEEEEEEEESSCCCSCCCCCCTTHHHHTTCEEEECCSCCGGGHHHHHHHHHHTSSC
T ss_pred             CCCCceEEEECCCH-HHHHHHHHhhccCCEEEEEecCCCCcCccCHHHHHhCCcEEEEecCccHHHHHHHHHHHHcCCCC
Confidence            3  79999999994 4599999999999999999986543 246666778899999999877788899999999999999


Q ss_pred             eeE-EEEecccHHHHHHHHHcCCCceEEEEEe
Q 018067          323 ADI-EVIPADYVNTALERLAKADVRYRFVIDV  353 (361)
Q Consensus       323 ~~~-~~~~l~~~~~a~~~~~~~~~~gkvvi~~  353 (361)
                      +.+ ++|+|+++++||+.+++++..||+|+.+
T Consensus       311 ~~i~~~~~l~~~~~A~~~~~~~~~~gKvvv~~  342 (343)
T 2eih_A          311 PVVGQVLPLEAAAEGHRLLEERRVFGKVVLQV  342 (343)
T ss_dssp             CCEEEEEEGGGHHHHHHHHHTTCSSSEEEEEC
T ss_pred             CceeEEeeHHHHHHHHHHHHcCCCceEEEEec
Confidence            887 8999999999999999988889999976

>1f8f_A Benzyl alcohol dehydrogenase; rossmann fold, oxidoreductase; HET: NAD; 2.20A {Acinetobacter calcoaceticus} SCOP: b.35.1.2 c.2.1.1

Probab=100.00  E-value=3.8e-57  Score=425.04  Aligned_cols=337  Identities=23%  Similarity=0.340  Sum_probs=283.6

Q ss_pred             ccceeeeeecCCCCCccceeeccCCCCCCeEEEEEeeeccCcchHHhHhcCCCCCCCCCcccccccEEEEEeCCCCCCCC
Q 018067           10 PKNAFGWAAKDTSGVLSPFHFSRRATGEKDVTFKVTHCGICHSDLHMIKNEWGNTIYPIVPGHEIVGVVTEVGSKVSKFK   89 (361)
Q Consensus        10 ~~~~~~~~~~~~~~~l~~~~~~~p~~~~~evlV~v~~~~i~~~D~~~~~g~~~~~~~p~~lG~e~~G~Vv~vG~~v~~~~   89 (361)
                      +|+++.+..++  +.++++++|.|+|+++||||||+++|||++|++.+.|.++ ..+|.++|||++|+|+++|++|++|+
T Consensus         6 ~mka~~~~~~g--~~l~~~~~~~P~~~~~eVlVkv~a~gi~~~D~~~~~g~~~-~~~P~v~GhE~~G~V~~vG~~v~~~~   82 (371)
T 1f8f_A            6 DIIAAVTPCKG--ADFELQALKIRQPQGDEVLVKVVATGMCHTDLIVRDQKYP-VPLPAVLGHEGSGIIEAIGPNVTELQ   82 (371)
T ss_dssp             EEEEEEBCSTT--CCCEEEEEEECCCCTTEEEEEEEEEECCHHHHHHHTTSSC-CCSSBCCCCEEEEEEEEECTTCCSCC
T ss_pred             cceEEEEcCCC--CCeEEEEecCCCCCCCEEEEEEEEeecCchhHHHHcCCCC-CCCCcccCcccceEEEEeCCCCCCCC
Confidence            35555543322  3488899999999999999999999999999999998665 46799999999999999999999999


Q ss_pred             CCCEEEeccccCCCCCCcccccCCCCCCcchhcc-ccc-----cc----CCC------CcCCCcceeEEeecCCceEECC
Q 018067           90 VGDKVGVGCMVGSCRSCDSCAIDLENYCPKVIMT-YAN-----KY----HDG------TITYGGYSDIMVADEHFVVRIP  153 (361)
Q Consensus        90 ~GdrV~~~~~~~~c~~c~~c~~~~~~~c~~~~~~-~~~-----~~----~~~------~~~~g~~a~~v~v~~~~~~~ip  153 (361)
                      +||||++.+  .+||+|.+|++|.+++|++.... +.+     ..    ..|      ....|+|+||+++++++++++|
T Consensus        83 ~GdrV~~~~--~~Cg~C~~C~~g~~~~C~~~~~~~~~g~~~~g~~~~~~~~g~~~~~~~~~~G~~aey~~v~~~~~~~iP  160 (371)
T 1f8f_A           83 VGDHVVLSY--GYCGKCTQCNTGNPAYCSEFFGRNFSGADSEGNHALCTHDQGVVNDHFFAQSSFATYALSRENNTVKVT  160 (371)
T ss_dssp             TTCEEEECC--CCCSSSHHHHTTCGGGCTTHHHHSSSSSCSSSCCSBC------CBCCGGGTCCSBSEEEEEGGGEEEEC
T ss_pred             CCCEEEecC--CCCCCChhhhCcCccccccccccccccccccccccccccCCccccccccCCccccCeEEechhheEECC
Confidence            999999877  69999999999999999986421 100     00    011      1246999999999999999999


Q ss_pred             CCCCcccccccchhhhhhhhHhhhcCCCCCCCEEEEEcCChHHHHHHHHHHHcCC-eEEEEeCCchhHHHHHHHcCCCEE
Q 018067          154 EGTPLDATAPLLCAGITVYSPLRFYGLDKPGMHVGVVGLGGLGHVAVKFAKAMGV-KVTVISTSPSKKSEAIERLGADSF  232 (361)
Q Consensus       154 ~~~~~~~aa~l~~~~~ta~~~l~~~~~~~~g~~vlV~Gag~vG~~a~~la~~~g~-~vi~~~~~~~~~~~~~~~~g~~~v  232 (361)
                      +++++++||++++++.|||+++.+.+++++|++|||+|+|++|++++|+|+.+|+ +|+++++++++++ +++++|++.+
T Consensus       161 ~~~~~~~aa~l~~~~~ta~~al~~~~~~~~g~~VlV~GaG~vG~~a~qlak~~Ga~~Vi~~~~~~~~~~-~a~~lGa~~v  239 (371)
T 1f8f_A          161 KDVPIELLGPLGCGIQTGAGACINALKVTPASSFVTWGAGAVGLSALLAAKVCGASIIIAVDIVESRLE-LAKQLGATHV  239 (371)
T ss_dssp             TTSCGGGTGGGGTHHHHHHHHHHTTTCCCTTCEEEEESCSHHHHHHHHHHHHHTCSEEEEEESCHHHHH-HHHHHTCSEE
T ss_pred             CCCCHHHHHHhcchHHHHHHHHHhccCCCCCCEEEEECCCHHHHHHHHHHHHcCCCeEEEECCCHHHHH-HHHHcCCCEE
Confidence            9999999999999999999999777789999999999999999999999999999 6888888777654 4589999999


Q ss_pred             ecCCCHH---HHHHhcC-CccEEEEcCCCcccHHHHHhccccCCEEEEecCCCC--CcccChHHHHhCCcEEEecccCC-
Q 018067          233 LVSRDQD---EMQAAMG-TMDGIIDTVSAVHPLMPLIGLLKSQGKLVLVGAPEK--PLELPAFSLLMGRKIVGGSMIGG-  305 (361)
Q Consensus       233 v~~~~~~---~~~~~~~-g~d~vid~~g~~~~~~~~~~~l~~~G~~v~~g~~~~--~~~~~~~~~~~~~~~i~g~~~~~-  305 (361)
                      +++++.+   .+.++++ ++|+|||++|....+..++++++++|+++.+|....  ...++...++.+++++.|+.... 
T Consensus       240 i~~~~~~~~~~~~~~~~gg~D~vid~~g~~~~~~~~~~~l~~~G~iv~~G~~~~~~~~~~~~~~~~~~~~~i~g~~~~~~  319 (371)
T 1f8f_A          240 INSKTQDPVAAIKEITDGGVNFALESTGSPEILKQGVDALGILGKIAVVGAPQLGTTAQFDVNDLLLGGKTILGVVEGSG  319 (371)
T ss_dssp             EETTTSCHHHHHHHHTTSCEEEEEECSCCHHHHHHHHHTEEEEEEEEECCCCSTTCCCCCCHHHHHHTTCEEEECSGGGS
T ss_pred             ecCCccCHHHHHHHhcCCCCcEEEECCCCHHHHHHHHHHHhcCCEEEEeCCCCCCCccccCHHHHHhCCCEEEEeCCCCC
Confidence            9987644   3444444 799999999987668999999999999999998653  35677777888999999987643 


Q ss_pred             --HHHHHHHHHHHHcCCCcee--E-EEEecccHHHHHHHHHcCCCceEEEEEeC
Q 018067          306 --MKETQEMIDFAAKHNIRAD--I-EVIPADYVNTALERLAKADVRYRFVIDVA  354 (361)
Q Consensus       306 --~~~~~~~~~ll~~~~~~~~--~-~~~~l~~~~~a~~~~~~~~~~gkvvi~~~  354 (361)
                        .++++++++++++|++++.  + + |||+++++||+.+++++. +|+|+.++
T Consensus       320 ~~~~~~~~~~~l~~~g~l~~~~~i~~-~~l~~~~~A~~~~~~~~~-~Kvvv~~~  371 (371)
T 1f8f_A          320 SPKKFIPELVRLYQQGKFPFDQLVKF-YAFDEINQAAIDSRKGIT-LKPIIKIA  371 (371)
T ss_dssp             CHHHHHHHHHHHHHTTSCCGGGGEEE-EEGGGHHHHHHHHHHTSC-SEEEEECC
T ss_pred             chHHHHHHHHHHHHcCCCCcccceeE-ecHHHHHHHHHHHHCCCc-eEEEEeeC
Confidence              4679999999999999863  4 6 999999999999998885 79999864

>1cdo_A Alcohol dehydrogenase; oxidoreductase, oxidoreductase (CH-OH(D)-NAD(A)); HET: NAD; 2.05A {Gadus callarias} SCOP: b.35.1.2 c.2.1.1

Probab=100.00  E-value=1.7e-56  Score=421.15  Aligned_cols=339  Identities=23%  Similarity=0.361  Sum_probs=282.9

Q ss_pred             ccceeeeeecCCCCCccceeeccCCCCCCeEEEEEeeeccCcchHH-hHhcCCCCCCCCCcccccccEEEEEeCCCCCCC
Q 018067           10 PKNAFGWAAKDTSGVLSPFHFSRRATGEKDVTFKVTHCGICHSDLH-MIKNEWGNTIYPIVPGHEIVGVVTEVGSKVSKF   88 (361)
Q Consensus        10 ~~~~~~~~~~~~~~~l~~~~~~~p~~~~~evlV~v~~~~i~~~D~~-~~~g~~~~~~~p~~lG~e~~G~Vv~vG~~v~~~   88 (361)
                      +|++.++...+..+.++++++|.|+|+++||||||+++|||++|++ .+.|..+ ..+|.++|||++|+|+++|++|++|
T Consensus         6 ~~~mka~~~~~~~~~l~~~~~~~p~~~~~eVlVkv~a~gi~~~D~~~~~~g~~~-~~~P~v~GhE~~G~V~~vG~~V~~~   84 (374)
T 1cdo_A            6 VIKCKAAVAWEANKPLVIEEIEVDVPHANEIRIKIIATGVCHTDLYHLFEGKHK-DGFPVVLGHEGAGIVESVGPGVTEF   84 (374)
T ss_dssp             CEEEEEEEBCSTTSCCEEEEEEECCCCTTEEEEEEEEEECCHHHHHHHHTTCCT-TSCSEECCCCEEEEEEEECTTCCSC
T ss_pred             cceeEEEEEecCCCCeEEEEeeCCCCCCCEEEEEEeEEeechhhHHHHhCCCCC-CCCCcccCccceEEEEEECCCCccC
Confidence            3444444443222358889999999999999999999999999999 8888665 5679999999999999999999999


Q ss_pred             CCCCEEEeccccCCCCCCcccccCCCCCCcchhcccc-cccCCC-------------CcCCCcceeEEeecCCceEECCC
Q 018067           89 KVGDKVGVGCMVGSCRSCDSCAIDLENYCPKVIMTYA-NKYHDG-------------TITYGGYSDIMVADEHFVVRIPE  154 (361)
Q Consensus        89 ~~GdrV~~~~~~~~c~~c~~c~~~~~~~c~~~~~~~~-~~~~~~-------------~~~~g~~a~~v~v~~~~~~~ip~  154 (361)
                      ++||||++.+.. +||+|.+|++|.+|.|++...... +....+             ....|+|+||+++|+++++++|+
T Consensus        85 ~vGdrV~~~~~~-~Cg~C~~C~~g~~~~C~~~~~~~~~G~~~~g~~~~~~~g~~~~~~~~~G~~aey~~v~~~~~~~~P~  163 (374)
T 1cdo_A           85 QPGEKVIPLFIS-QCGECRFCQSPKTNQCVKGWANESPDVMSPKETRFTCKGRKVLQFLGTSTFSQYTVVNQIAVAKIDP  163 (374)
T ss_dssp             CTTCEEEECSSC-CCSSSHHHHCTTCCCCSCSGGGTCTTTTSCSCCCEEETTEEEEEGGGTCCSBSEEEEEGGGEEECCT
T ss_pred             CCCCEEEeCCCC-CCCCChhhcCCCcCcCCCcccccccccccCCccccccCCcccccccCCccceeEEEEchhheEECCC
Confidence            999999887654 899999999999999998643211 100001             11359999999999999999999


Q ss_pred             CCCcccccccchhhhhhhhHhhhcCCCCCCCEEEEEcCChHHHHHHHHHHHcCC-eEEEEeCCchhHHHHHHHcCCCEEe
Q 018067          155 GTPLDATAPLLCAGITVYSPLRFYGLDKPGMHVGVVGLGGLGHVAVKFAKAMGV-KVTVISTSPSKKSEAIERLGADSFL  233 (361)
Q Consensus       155 ~~~~~~aa~l~~~~~ta~~~l~~~~~~~~g~~vlV~Gag~vG~~a~~la~~~g~-~vi~~~~~~~~~~~~~~~~g~~~vv  233 (361)
                      ++++++||.+++++.|||+++.+..++++|++|||+|+|++|++++|+|+.+|+ +|+++++++++++. ++++|+++++
T Consensus       164 ~~~~~~aa~l~~~~~ta~~~l~~~~~~~~g~~VlV~GaG~vG~~a~qla~~~Ga~~Vi~~~~~~~~~~~-~~~lGa~~vi  242 (374)
T 1cdo_A          164 SAPLDTVCLLGCGVSTGFGAAVNTAKVEPGSTCAVFGLGAVGLAAVMGCHSAGAKRIIAVDLNPDKFEK-AKVFGATDFV  242 (374)
T ss_dssp             TCCHHHHGGGGTHHHHHHHHHHTTTCCCTTCEEEEECCSHHHHHHHHHHHHTTCSEEEEECSCGGGHHH-HHHTTCCEEE
T ss_pred             CCCHHHHhhhccHHHHHHHHHHhccCCCCCCEEEEECCCHHHHHHHHHHHHcCCCEEEEEcCCHHHHHH-HHHhCCceEE
Confidence            999999999999999999998777889999999999999999999999999999 79888888777654 4899999999


Q ss_pred             cCCC--H---HHHHHhc-CCccEEEEcCCCcccHHHHHhccccC-CEEEEecCCCC-CcccChHHHHhCCcEEEecccC-
Q 018067          234 VSRD--Q---DEMQAAM-GTMDGIIDTVSAVHPLMPLIGLLKSQ-GKLVLVGAPEK-PLELPAFSLLMGRKIVGGSMIG-  304 (361)
Q Consensus       234 ~~~~--~---~~~~~~~-~g~d~vid~~g~~~~~~~~~~~l~~~-G~~v~~g~~~~-~~~~~~~~~~~~~~~i~g~~~~-  304 (361)
                      ++++  .   +.+.+++ +++|++||++|....+..++++++++ |+++.+|.... ...++...++.++ ++.|+... 
T Consensus       243 ~~~~~~~~~~~~~~~~~~~g~D~vid~~g~~~~~~~~~~~l~~~~G~iv~~G~~~~~~~~~~~~~~~~~~-~i~g~~~~~  321 (374)
T 1cdo_A          243 NPNDHSEPISQVLSKMTNGGVDFSLECVGNVGVMRNALESCLKGWGVSVLVGWTDLHDVATRPIQLIAGR-TWKGSMFGG  321 (374)
T ss_dssp             CGGGCSSCHHHHHHHHHTSCBSEEEECSCCHHHHHHHHHTBCTTTCEEEECSCCSSSCEEECHHHHHTTC-EEEECSGGG
T ss_pred             eccccchhHHHHHHHHhCCCCCEEEECCCCHHHHHHHHHHhhcCCcEEEEEcCCCCCCcccCHHHHhcCC-eEEEEecCC
Confidence            8763  2   3344444 37999999999876689999999999 99999998654 4567777777788 99998654 


Q ss_pred             --CHHHHHHHHHHHHcCCCce--eE-EEEecccHHHHHHHHHcCCCceEEEEEe
Q 018067          305 --GMKETQEMIDFAAKHNIRA--DI-EVIPADYVNTALERLAKADVRYRFVIDV  353 (361)
Q Consensus       305 --~~~~~~~~~~ll~~~~~~~--~~-~~~~l~~~~~a~~~~~~~~~~gkvvi~~  353 (361)
                        ..++++++++++++|++++  .+ ++|||+++++||+.+++++. +|+|+.+
T Consensus       322 ~~~~~~~~~~~~l~~~g~l~~~~~i~~~~~l~~~~~A~~~~~~~~~-~kvvi~~  374 (374)
T 1cdo_A          322 FKGKDGVPKMVKAYLDKKVKLDEFITHRMPLESVNDAIDLMKHGKC-IRTVLSL  374 (374)
T ss_dssp             CCHHHHHHHHHHHHHTTSSCCGGGEEEEEEGGGHHHHHHHHHTTCC-SEEEEEC
T ss_pred             CCcHHHHHHHHHHHHcCCCChHHheeeEecHHHHHHHHHHHHCCCe-eEEEEeC
Confidence              2568999999999999874  44 89999999999999998885 7999875

>2jhf_A Alcohol dehydrogenase E chain; oxidoreductase, metal coordination, NAD, zinc, inhibition, acetylation, metal-binding; HET: NAD; 1.0A {Equus caballus} SCOP: b.35.1.2 c.2.1.1 PDB: 1adc_A* 1adf_A* 1adg_A* 1adb_A* 1bto_A* 1heu_A* 1hf3_A* 1hld_A* 1lde_A* 1ldy_A* 1mg0_A* 1n92_A* 1p1r_A* 1ye3_A 1het_A* 2jhg_A* 2ohx_A* 2oxi_A* 3bto_A* 4dwv_A* ...

Probab=100.00  E-value=2.7e-56  Score=419.75  Aligned_cols=339  Identities=22%  Similarity=0.356  Sum_probs=282.5

Q ss_pred             ccceeeeeecCCCCCccceeeccCCCCCCeEEEEEeeeccCcchHHhHhcCCCCCCCCCcccccccEEEEEeCCCCCCCC
Q 018067           10 PKNAFGWAAKDTSGVLSPFHFSRRATGEKDVTFKVTHCGICHSDLHMIKNEWGNTIYPIVPGHEIVGVVTEVGSKVSKFK   89 (361)
Q Consensus        10 ~~~~~~~~~~~~~~~l~~~~~~~p~~~~~evlV~v~~~~i~~~D~~~~~g~~~~~~~p~~lG~e~~G~Vv~vG~~v~~~~   89 (361)
                      ||++.++...+..+.++++++|.|+|+++||||||+++|||++|++.+.|..+.. +|.++|||++|+|+++|++|++|+
T Consensus         6 ~~~mkA~~~~~~g~~l~~~~~~~p~~~~~eVlVkv~a~gi~~~D~~~~~g~~~~~-~P~v~GhE~~G~V~~vG~~v~~~~   84 (374)
T 2jhf_A            6 VIKCKAAVLWEEKKPFSIEEVEVAPPKAHEVRIKMVATGICRSDDHVVSGTLVTP-LPVIAGHEAAGIVESIGEGVTTVR   84 (374)
T ss_dssp             CEEEEEEEBCSTTSCCEEEEEEECCCCTTEEEEEEEEEECCHHHHHHHHTSSCCC-SSBCCCCSEEEEEEEECTTCCSCC
T ss_pred             ceeEEEEEEecCCCceEEEEccCCCCCCCeEEEEEeEEeechhhHHHHcCCCCCC-CCcccCcCceEEEEEECCCCCCCC
Confidence            3444444443222358889999999999999999999999999999999876543 799999999999999999999999


Q ss_pred             CCCEEEeccccCCCCCCcccccCCCCCCcchhcccc-cccC-------------CCCcCCCcceeEEeecCCceEECCCC
Q 018067           90 VGDKVGVGCMVGSCRSCDSCAIDLENYCPKVIMTYA-NKYH-------------DGTITYGGYSDIMVADEHFVVRIPEG  155 (361)
Q Consensus        90 ~GdrV~~~~~~~~c~~c~~c~~~~~~~c~~~~~~~~-~~~~-------------~~~~~~g~~a~~v~v~~~~~~~ip~~  155 (361)
                      +||||++.+.. +||+|.+|++|.+|+|++...... +...             .+....|+|+||+.+++++++++|++
T Consensus        85 vGdrV~~~~~~-~Cg~C~~C~~g~~~~C~~~~~~~~~g~~~~g~~~~~~~g~~~~~~~~~G~~aey~~v~~~~~~~iP~~  163 (374)
T 2jhf_A           85 PGDKVIPLFTP-QCGKCRVCKHPEGNFCLKNDLSMPRGTMQDGTSRFTCRGKPIHHFLGTSTFSQYTVVDEISVAKIDAA  163 (374)
T ss_dssp             TTCEEEECSSC-CCSCSHHHHSTTCCCCTTCSSSSCCCSCTTSCCSEEETTEEEBCSTTTCCSBSEEEEEGGGEEECCTT
T ss_pred             CCCEEEECCCC-CCCCCccccCCCcCcCCCCccccccccccCCcccccccccccccccCCccCeeEEEEchHHeEECCCC
Confidence            99999887654 899999999999999998643211 1000             01123599999999999999999999


Q ss_pred             CCcccccccchhhhhhhhHhhhcCCCCCCCEEEEEcCChHHHHHHHHHHHcCC-eEEEEeCCchhHHHHHHHcCCCEEec
Q 018067          156 TPLDATAPLLCAGITVYSPLRFYGLDKPGMHVGVVGLGGLGHVAVKFAKAMGV-KVTVISTSPSKKSEAIERLGADSFLV  234 (361)
Q Consensus       156 ~~~~~aa~l~~~~~ta~~~l~~~~~~~~g~~vlV~Gag~vG~~a~~la~~~g~-~vi~~~~~~~~~~~~~~~~g~~~vv~  234 (361)
                      +++++||.+++++.|||+++.+.+++++|++|||+|+|++|++++|+|+.+|+ +|+++++++++++.+ +++|++++++
T Consensus       164 l~~~~aa~l~~~~~ta~~~l~~~~~~~~g~~VlV~GaG~vG~~a~qla~~~Ga~~Vi~~~~~~~~~~~~-~~lGa~~vi~  242 (374)
T 2jhf_A          164 SPLEKVCLIGCGFSTGYGSAVKVAKVTQGSTCAVFGLGGVGLSVIMGCKAAGAARIIGVDINKDKFAKA-KEVGATECVN  242 (374)
T ss_dssp             CCHHHHGGGGTHHHHHHHHHHTTTCCCTTCEEEEECCSHHHHHHHHHHHHTTCSEEEEECSCGGGHHHH-HHTTCSEEEC
T ss_pred             CCHHHhhhhccHHHHHHHHHHhccCCCCCCEEEEECCCHHHHHHHHHHHHcCCCeEEEEcCCHHHHHHH-HHhCCceEec
Confidence            99999999999999999999877889999999999999999999999999999 798888887776554 8999999998


Q ss_pred             CCC--H---HHHHHhcC-CccEEEEcCCCcccHHHHHhccccC-CEEEEecCCCC--CcccChHHHHhCCcEEEecccCC
Q 018067          235 SRD--Q---DEMQAAMG-TMDGIIDTVSAVHPLMPLIGLLKSQ-GKLVLVGAPEK--PLELPAFSLLMGRKIVGGSMIGG  305 (361)
Q Consensus       235 ~~~--~---~~~~~~~~-g~d~vid~~g~~~~~~~~~~~l~~~-G~~v~~g~~~~--~~~~~~~~~~~~~~~i~g~~~~~  305 (361)
                      +++  .   +.+.++++ ++|+|||++|...++..++++++++ |+++.+|....  ...++...++.++ ++.|+....
T Consensus       243 ~~~~~~~~~~~~~~~~~~g~D~vid~~g~~~~~~~~~~~l~~~~G~iv~~G~~~~~~~~~~~~~~~~~~~-~i~g~~~~~  321 (374)
T 2jhf_A          243 PQDYKKPIQEVLTEMSNGGVDFSFEVIGRLDTMVTALSCCQEAYGVSVIVGVPPDSQNLSMNPMLLLSGR-TWKGAIFGG  321 (374)
T ss_dssp             GGGCSSCHHHHHHHHTTSCBSEEEECSCCHHHHHHHHHHBCTTTCEEEECSCCCTTCCEEECTHHHHTTC-EEEECSGGG
T ss_pred             ccccchhHHHHHHHHhCCCCcEEEECCCCHHHHHHHHHHhhcCCcEEEEeccCCCCCccccCHHHHhcCC-eEEEeccCC
Confidence            764  2   33445443 7999999999976689999999999 99999997653  3567777777788 999986542


Q ss_pred             ---HHHHHHHHHHHHcCCCce--eE-EEEecccHHHHHHHHHcCCCceEEEEEe
Q 018067          306 ---MKETQEMIDFAAKHNIRA--DI-EVIPADYVNTALERLAKADVRYRFVIDV  353 (361)
Q Consensus       306 ---~~~~~~~~~ll~~~~~~~--~~-~~~~l~~~~~a~~~~~~~~~~gkvvi~~  353 (361)
                         .++++++++++++|++++  .+ ++|+|+++++||+.+.+++. +|+|+.+
T Consensus       322 ~~~~~~~~~~~~l~~~g~i~~~~~i~~~~~l~~~~~A~~~~~~~~~-~Kvvi~~  374 (374)
T 2jhf_A          322 FKSKDSVPKLVADFMAKKFALDPLITHVLPFEKINEGFDLLRSGES-IRTILTF  374 (374)
T ss_dssp             CCHHHHHHHHHHHHHTTSSCCGGGEEEEEEGGGHHHHHHHHHTTCC-SEEEEEC
T ss_pred             CChHHHHHHHHHHHHcCCCCchhheEEEEeHHHHHHHHHHHHCCCc-ceEEEeC
Confidence               578999999999999874  44 89999999999999998875 7999874

>2d8a_A PH0655, probable L-threonine 3-dehydrogenase; pyrococcus horikoshii OT3, structural genomics; HET: NAD; 2.05A {Pyrococcus horikoshii} PDB: 2dfv_A* 3gfb_A*

Probab=100.00  E-value=3.9e-57  Score=421.45  Aligned_cols=330  Identities=21%  Similarity=0.263  Sum_probs=272.1

Q ss_pred             ccceeeeeecCCCCCccceeeccCCCCCCeEEEEEeeeccCcchHHhHhc-CCC--CCCCCCcccccccEEEEEeCCCCC
Q 018067           10 PKNAFGWAAKDTSGVLSPFHFSRRATGEKDVTFKVTHCGICHSDLHMIKN-EWG--NTIYPIVPGHEIVGVVTEVGSKVS   86 (361)
Q Consensus        10 ~~~~~~~~~~~~~~~l~~~~~~~p~~~~~evlV~v~~~~i~~~D~~~~~g-~~~--~~~~p~~lG~e~~G~Vv~vG~~v~   86 (361)
                      +|+++.+..++.  .++++++|.|+|+++||||||+++|||++|++.++| .++  ...+|.++|||++|+|+++|++|+
T Consensus         4 ~mka~~~~~~g~--~l~~~~~~~P~~~~~eVlVkv~a~gi~~~D~~~~~g~~~~~~~~~~p~v~G~E~~G~V~~vG~~v~   81 (348)
T 2d8a_A            4 KMVAIMKTKPGY--GAELVEVDVPKPGPGEVLIKVLATSICGTDLHIYEWNEWAQSRIKPPQIMGHEVAGEVVEIGPGVE   81 (348)
T ss_dssp             EEEEEEECSSSS--SCEEEEEECCCCCTTEEEEEEEEEECCHHHHHHHHTCTTHHHHCCSSEECCCEEEEEEEEECTTCC
T ss_pred             cceEEEEECCCC--CEEEEECCCCCCCcCEEEEEEeEEEecHHHHHHHcCCCCCcccCCCCCccCccceEEEEEECCCCC
Confidence            577777654332  788999999999999999999999999999999988 432  236789999999999999999999


Q ss_pred             CCCCCCEEEeccccCCCCCCcccccCCCCCCcchhcccccccCCCCcCCCcceeEEeecCCceEECCCCCCcccccccch
Q 018067           87 KFKVGDKVGVGCMVGSCRSCDSCAIDLENYCPKVIMTYANKYHDGTITYGGYSDIMVADEHFVVRIPEGTPLDATAPLLC  166 (361)
Q Consensus        87 ~~~~GdrV~~~~~~~~c~~c~~c~~~~~~~c~~~~~~~~~~~~~~~~~~g~~a~~v~v~~~~~~~ip~~~~~~~aa~l~~  166 (361)
                      +|++||||++.+.. +|++|.+|++|.+++|++..+.       |....|+|+||+++|++.++++|+++++++||.+. 
T Consensus        82 ~~~vGdrV~~~~~~-~cg~C~~C~~g~~~~C~~~~~~-------g~~~~G~~aey~~v~~~~~~~iP~~~~~~~aa~~~-  152 (348)
T 2d8a_A           82 GIEVGDYVSVETHI-VCGKCYACRRGQYHVCQNTKIF-------GVDTDGVFAEYAVVPAQNIWKNPKSIPPEYATLQE-  152 (348)
T ss_dssp             SCCTTCEEEECCEE-CCSCCC------------CEET-------TTSSCCSSBSEEEEEGGGEEECCTTSCHHHHTTHH-
T ss_pred             cCCCCCEEEEcCCC-CCCCChhhhCcCcccCCCCCee-------cCCCCCcCcceEEeChHHeEECCCCCCHHHHHhhh-
Confidence            99999999987765 8999999999999999986432       33567999999999999999999999999998774 


Q ss_pred             hhhhhhhHhhhcCCCCCCCEEEEEcCChHHHHHHHHHHHcCC-eEEEEeCCchhHHHHHHHcCCCEEecCCCHH---HHH
Q 018067          167 AGITVYSPLRFYGLDKPGMHVGVVGLGGLGHVAVKFAKAMGV-KVTVISTSPSKKSEAIERLGADSFLVSRDQD---EMQ  242 (361)
Q Consensus       167 ~~~ta~~~l~~~~~~~~g~~vlV~Gag~vG~~a~~la~~~g~-~vi~~~~~~~~~~~~~~~~g~~~vv~~~~~~---~~~  242 (361)
                      ++.|||++++ ..++ +|++|||+|+|++|++++|+|+.+|+ +|+++++++++++.+ +++|+++++++++++   .+.
T Consensus       153 ~~~ta~~~l~-~~~~-~g~~VlV~GaG~vG~~~~q~a~~~Ga~~Vi~~~~~~~~~~~~-~~~Ga~~~~~~~~~~~~~~v~  229 (348)
T 2d8a_A          153 PLGNAVDTVL-AGPI-SGKSVLITGAGPLGLLGIAVAKASGAYPVIVSEPSDFRRELA-KKVGADYVINPFEEDVVKEVM  229 (348)
T ss_dssp             HHHHHHHHHT-TSCC-TTCCEEEECCSHHHHHHHHHHHHTTCCSEEEECSCHHHHHHH-HHHTCSEEECTTTSCHHHHHH
T ss_pred             HHHHHHHHHH-hcCC-CCCEEEEECCCHHHHHHHHHHHHcCCCEEEEECCCHHHHHHH-HHhCCCEEECCCCcCHHHHHH
Confidence            7889999995 5668 99999999999999999999999999 999999887765544 789999999987644   344


Q ss_pred             HhcC--CccEEEEcCCCcccHHHHHhccccCCEEEEecCCCCCcccCh-HHHHhCCcEEEecccCC-HHHHHHHHHHHHc
Q 018067          243 AAMG--TMDGIIDTVSAVHPLMPLIGLLKSQGKLVLVGAPEKPLELPA-FSLLMGRKIVGGSMIGG-MKETQEMIDFAAK  318 (361)
Q Consensus       243 ~~~~--g~d~vid~~g~~~~~~~~~~~l~~~G~~v~~g~~~~~~~~~~-~~~~~~~~~i~g~~~~~-~~~~~~~~~ll~~  318 (361)
                      ++++  ++|++||++|....+..++++++++|+++.+|.......++. ..++.+++++.|+.... .++++++++++++
T Consensus       230 ~~~~g~g~D~vid~~g~~~~~~~~~~~l~~~G~iv~~g~~~~~~~~~~~~~~~~~~~~i~g~~~~~~~~~~~~~~~l~~~  309 (348)
T 2d8a_A          230 DITDGNGVDVFLEFSGAPKALEQGLQAVTPAGRVSLLGLYPGKVTIDFNNLIIFKALTIYGITGRHLWETWYTVSRLLQS  309 (348)
T ss_dssp             HHTTTSCEEEEEECSCCHHHHHHHHHHEEEEEEEEECCCCSSCCCCCHHHHTTTTTCEEEECCCCCSHHHHHHHHHHHHH
T ss_pred             HHcCCCCCCEEEECCCCHHHHHHHHHHHhcCCEEEEEccCCCCcccCchHHHHhCCcEEEEecCCCcHHHHHHHHHHHHc
Confidence            4443  799999999996668999999999999999998766666777 77788999999988766 7889999999999


Q ss_pred             CCC--ceeE-EEEe-cccHHHHHHHHHcCCCceEEEEEeC
Q 018067          319 HNI--RADI-EVIP-ADYVNTALERLAKADVRYRFVIDVA  354 (361)
Q Consensus       319 ~~~--~~~~-~~~~-l~~~~~a~~~~~~~~~~gkvvi~~~  354 (361)
                      |++  ++.+ ++|+ |+++++||+.+++ +..||+|+.++
T Consensus       310 g~i~~~~~i~~~~~gl~~~~~A~~~~~~-~~~gKvvi~~~  348 (348)
T 2d8a_A          310 GKLNLDPIITHKYKGFDKYEEAFELMRA-GKTGKVVFMLK  348 (348)
T ss_dssp             TCCCCTTTEEEEEESSTTHHHHHHHHHT-TCCSEEEEEC-
T ss_pred             CCCChHHhheeeCCCHHHHHHHHHHHhC-CCceEEEEeeC
Confidence            996  4555 8999 9999999999987 45799999864

>2dq4_A L-threonine 3-dehydrogenase; NAD-dependent, oxidoreductase, structural genomics, NPPSFA; HET: MES; 2.50A {Thermus thermophilus} PDB: 2ejv_A*

Probab=100.00  E-value=1.3e-57  Score=423.75  Aligned_cols=329  Identities=20%  Similarity=0.279  Sum_probs=284.2

Q ss_pred             cceeeeeecCCCCCccceeeccCCCCCCeEEEEEeeeccCcchHHhHhcCCC---CCCCCCcccccccEEEEEeCCCCCC
Q 018067           11 KNAFGWAAKDTSGVLSPFHFSRRATGEKDVTFKVTHCGICHSDLHMIKNEWG---NTIYPIVPGHEIVGVVTEVGSKVSK   87 (361)
Q Consensus        11 ~~~~~~~~~~~~~~l~~~~~~~p~~~~~evlV~v~~~~i~~~D~~~~~g~~~---~~~~p~~lG~e~~G~Vv~vG~~v~~   87 (361)
                      |+++.+..++.+  ++++++|.|+|+++||||||+++|||++|++.+.|.++   ...+|.++|||++|+|+++|++|++
T Consensus         1 Mka~~~~~~g~~--l~~~~~~~P~~~~~eVlVkv~a~gi~~~D~~~~~g~~~~~~~~~~p~v~G~E~~G~V~~vG~~v~~   78 (343)
T 2dq4_A            1 MRALAKLAPEEG--LTLVDRPVPEPGPGEILVRVEAASICGTDLHIWKWDAWARGRIRPPLVTGHEFSGVVEAVGPGVRR   78 (343)
T ss_dssp             CEEEEECSSSSS--CEEEECCCCCCCTTEEEEEEEEEECCHHHHHHHTTCHHHHHHCCSSEECCCEEEEEEEEECTTCCS
T ss_pred             CeEEEEeCCCCc--EEEEeccCCCCCCCEEEEEEEEEeechhhHHHHcCCCCccccCCCCCcCCccceEEEEEECCCCCc
Confidence            667776554432  88899999999999999999999999999999988654   2467899999999999999999999


Q ss_pred             CCCCCEEEeccccCCCCCCcccccCCCCCCcchhcccccccCCCCcCCCcceeEEeecCCceEECCCCCCcccccccchh
Q 018067           88 FKVGDKVGVGCMVGSCRSCDSCAIDLENYCPKVIMTYANKYHDGTITYGGYSDIMVADEHFVVRIPEGTPLDATAPLLCA  167 (361)
Q Consensus        88 ~~~GdrV~~~~~~~~c~~c~~c~~~~~~~c~~~~~~~~~~~~~~~~~~g~~a~~v~v~~~~~~~ip~~~~~~~aa~l~~~  167 (361)
                      |++||||++.+.. +||+|.+|++|.+++|++....       |....|+|+||+.+++++++++|+++++++||.+ .+
T Consensus        79 ~~vGdrV~~~~~~-~cg~C~~C~~g~~~~C~~~~~~-------g~~~~G~~aey~~v~~~~~~~iP~~~~~~~aa~~-~~  149 (343)
T 2dq4_A           79 PQVGDHVSLESHI-VCHACPACRTGNYHVCLNTQIL-------GVDRDGGFAEYVVVPAENAWVNPKDLPFEVAAIL-EP  149 (343)
T ss_dssp             SCTTCEEEECCEE-CCSCSHHHHTTCGGGCTTCEEB-------TTTBCCSSBSEEEEEGGGEEEECTTSCHHHHTTH-HH
T ss_pred             CCCCCEEEECCCC-CCCCChhhhCcCcccCCCccee-------cCCCCCcceeEEEEchHHeEECCCCCCHHHHHhh-hH
Confidence            9999999987766 8999999999999999986432       3346799999999999999999999999999877 56


Q ss_pred             hhhhhhHhhhcCCCCCCCEEEEEcCChHHHHHHHHHHHcCC-eEEEEeCCchhHHHHHHHcCCCEEecCCCHHH---HHH
Q 018067          168 GITVYSPLRFYGLDKPGMHVGVVGLGGLGHVAVKFAKAMGV-KVTVISTSPSKKSEAIERLGADSFLVSRDQDE---MQA  243 (361)
Q Consensus       168 ~~ta~~~l~~~~~~~~g~~vlV~Gag~vG~~a~~la~~~g~-~vi~~~~~~~~~~~~~~~~g~~~vv~~~~~~~---~~~  243 (361)
                      +.|||+++....++ +|++|||+|+|++|++++|+|+.+|+ +|+++++++++++.+ +++ ++.++++++++.   +.+
T Consensus       150 ~~ta~~~l~~~~~~-~g~~VlV~GaG~vG~~~~q~a~~~Ga~~Vi~~~~~~~~~~~~-~~l-a~~v~~~~~~~~~~~~~~  226 (343)
T 2dq4_A          150 FGNAVHTVYAGSGV-SGKSVLITGAGPIGLMAAMVVRASGAGPILVSDPNPYRLAFA-RPY-ADRLVNPLEEDLLEVVRR  226 (343)
T ss_dssp             HHHHHHHHHSTTCC-TTSCEEEECCSHHHHHHHHHHHHTTCCSEEEECSCHHHHGGG-TTT-CSEEECTTTSCHHHHHHH
T ss_pred             HHHHHHHHHHhCCC-CCCEEEEECCCHHHHHHHHHHHHcCCCEEEEECCCHHHHHHH-HHh-HHhccCcCccCHHHHHHH
Confidence            78999999756678 99999999999999999999999999 999999887776544 778 999998876443   333


Q ss_pred             hc-CCccEEEEcCCCcccHHHHHhccccCCEEEEecCCCCCcccCh-HHHHhCCcEEEecccC-CHHHHHHHHHHHHcCC
Q 018067          244 AM-GTMDGIIDTVSAVHPLMPLIGLLKSQGKLVLVGAPEKPLELPA-FSLLMGRKIVGGSMIG-GMKETQEMIDFAAKHN  320 (361)
Q Consensus       244 ~~-~g~d~vid~~g~~~~~~~~~~~l~~~G~~v~~g~~~~~~~~~~-~~~~~~~~~i~g~~~~-~~~~~~~~~~ll~~~~  320 (361)
                      ++ .++|++||++|+...+..++++++++|+++.+|.......++. ..++.+++++.|+... ..++++++++++++|+
T Consensus       227 ~~~~g~D~vid~~g~~~~~~~~~~~l~~~G~iv~~g~~~~~~~~~~~~~~~~~~~~i~g~~~~~~~~~~~~~~~l~~~g~  306 (343)
T 2dq4_A          227 VTGSGVEVLLEFSGNEAAIHQGLMALIPGGEARILGIPSDPIRFDLAGELVMRGITAFGIAGRRLWQTWMQGTALVYSGR  306 (343)
T ss_dssp             HHSSCEEEEEECSCCHHHHHHHHHHEEEEEEEEECCCCSSCEEECHHHHTGGGTCEEEECCSCCTTHHHHHHHHHHHHTS
T ss_pred             hcCCCCCEEEECCCCHHHHHHHHHHHhcCCEEEEEecCCCCceeCcHHHHHhCceEEEEeecCCCHHHHHHHHHHHHcCC
Confidence            33 3799999999996668999999999999999998766667777 7788899999998776 6788999999999999


Q ss_pred             C--ceeE-EEEecccHHHHHHHHHcCCCceEEEEEeC
Q 018067          321 I--RADI-EVIPADYVNTALERLAKADVRYRFVIDVA  354 (361)
Q Consensus       321 ~--~~~~-~~~~l~~~~~a~~~~~~~~~~gkvvi~~~  354 (361)
                      +  ++.+ ++|+|+++++||+.+.+++. ||+|++++
T Consensus       307 ~~~~~~i~~~~~l~~~~~A~~~~~~~~~-gKvv~~~~  342 (343)
T 2dq4_A          307 VDLSPLLTHRLPLSRYREAFGLLASGQA-VKVILDPK  342 (343)
T ss_dssp             SCCGGGEEEEEEGGGHHHHHHHHHHSSC-SEEEEETT
T ss_pred             CChHHheeEEecHHHHHHHHHHHhcCCc-eEEEEeeC
Confidence            5  5555 89999999999999998887 99999875

>1jvb_A NAD(H)-dependent alcohol dehydrogenase; archaeon, zinc, oxidoreductase; HET: MSE; 1.85A {Sulfolobus solfataricus} SCOP: b.35.1.2 c.2.1.1 PDB: 1r37_A* 1nto_A 1nvg_A 3i4c_A 2eer_A*

Probab=100.00  E-value=9.1e-57  Score=418.78  Aligned_cols=329  Identities=27%  Similarity=0.394  Sum_probs=288.3

Q ss_pred             cceeeeeecCCCCCccceeeccCCCCCCeEEEEEeeeccCcchHHhHhcCCC--------CCCCCCcccccccEEEEEeC
Q 018067           11 KNAFGWAAKDTSGVLSPFHFSRRATGEKDVTFKVTHCGICHSDLHMIKNEWG--------NTIYPIVPGHEIVGVVTEVG   82 (361)
Q Consensus        11 ~~~~~~~~~~~~~~l~~~~~~~p~~~~~evlV~v~~~~i~~~D~~~~~g~~~--------~~~~p~~lG~e~~G~Vv~vG   82 (361)
                      |+++.+..++  +.++++++|.|+|+++||||||+++|||++|++.++|.++        ...+|.++|||++|+|+++|
T Consensus         1 Mka~~~~~~g--~~l~~~~~~~p~~~~~eVlVkv~a~gi~~~D~~~~~g~~~~~~~~~~~~~~~p~i~G~e~~G~V~~vG   78 (347)
T 1jvb_A            1 MRAVRLVEIG--KPLSLQEIGVPKPKGPQVLIKVEAAGVCHSDVHMRQGRFGNLRIVEDLGVKLPVTLGHEIAGKIEEVG   78 (347)
T ss_dssp             CEEEEECSTT--SCCEEEECCCCCCCTTCEEEEEEEEEECTHHHHHTTTEETTEETTTTTCCCSCEECCCEEEEEEEEEC
T ss_pred             CeEEEEecCC--CCeEEEEeeCCCCCCCeEEEEEEEEEecHHHHHHhcCCCcccccccccCCCCCccccccceEEEEEEC
Confidence            5666665533  3488899999999999999999999999999999888654        24679999999999999999


Q ss_pred             CCCCCCCCCCEEEeccccCCCCCCcccccCCCCCCcchhcccccccCCCCcCCCcceeEEeecC-CceEECCCCCCcccc
Q 018067           83 SKVSKFKVGDKVGVGCMVGSCRSCDSCAIDLENYCPKVIMTYANKYHDGTITYGGYSDIMVADE-HFVVRIPEGTPLDAT  161 (361)
Q Consensus        83 ~~v~~~~~GdrV~~~~~~~~c~~c~~c~~~~~~~c~~~~~~~~~~~~~~~~~~g~~a~~v~v~~-~~~~~ip~~~~~~~a  161 (361)
                      ++|++|++||||+..+. .+|++|.+|++|.+++|++....       |....|+|+||+.+|+ ++++++ +++++++|
T Consensus        79 ~~v~~~~vGdrV~~~~~-~~Cg~C~~C~~g~~~~C~~~~~~-------G~~~~G~~aey~~v~~~~~~~~i-~~~~~~~a  149 (347)
T 1jvb_A           79 DEVVGYSKGDLVAVNPW-QGEGNCYYCRIGEEHLCDSPRWL-------GINFDGAYAEYVIVPHYKYMYKL-RRLNAVEA  149 (347)
T ss_dssp             TTCCSCCTTCEEEECCE-ECCSSSHHHHTTCGGGCSSCEEB-------TTTBCCSSBSEEEESCGGGEEEC-SSSCHHHH
T ss_pred             CCCCCCCCCCEEEeCCC-CCCCCChhhhCcCcccCcccccc-------cccCCCcceeEEEecCccceEEe-CCCCHHHc
Confidence            99999999999966554 49999999999999999986432       3356799999999999 999999 99999999


Q ss_pred             cccchhhhhhhhHhhhcCCCCCCCEEEEEcC-ChHHHHHHHHHHHc-CCeEEEEeCCchhHHHHHHHcCCCEEecCCCHH
Q 018067          162 APLLCAGITVYSPLRFYGLDKPGMHVGVVGL-GGLGHVAVKFAKAM-GVKVTVISTSPSKKSEAIERLGADSFLVSRDQD  239 (361)
Q Consensus       162 a~l~~~~~ta~~~l~~~~~~~~g~~vlV~Ga-g~vG~~a~~la~~~-g~~vi~~~~~~~~~~~~~~~~g~~~vv~~~~~~  239 (361)
                      |++++++.|||+++.+ .++++|++|||+|+ |++|++++|+++.. |++|+++++++++++.+ +++|++.++++.+.+
T Consensus       150 a~l~~~~~ta~~~l~~-~~~~~g~~vlV~Gagg~iG~~~~~~a~~~~Ga~Vi~~~~~~~~~~~~-~~~g~~~~~~~~~~~  227 (347)
T 1jvb_A          150 APLTCSGITTYRAVRK-ASLDPTKTLLVVGAGGGLGTMAVQIAKAVSGATIIGVDVREEAVEAA-KRAGADYVINASMQD  227 (347)
T ss_dssp             GGGGTHHHHHHHHHHH-TTCCTTCEEEEETTTSHHHHHHHHHHHHHTCCEEEEEESSHHHHHHH-HHHTCSEEEETTTSC
T ss_pred             ccchhhHHHHHHHHHh-cCCCCCCEEEEECCCccHHHHHHHHHHHcCCCeEEEEcCCHHHHHHH-HHhCCCEEecCCCcc
Confidence            9999999999999976 66899999999998 59999999999999 99999999888776555 789999988887654


Q ss_pred             H---HHHhc--CCccEEEEcCCCcccHHHHHhccccCCEEEEecCCC-CCcccChHHHHhCCcEEEecccCCHHHHHHHH
Q 018067          240 E---MQAAM--GTMDGIIDTVSAVHPLMPLIGLLKSQGKLVLVGAPE-KPLELPAFSLLMGRKIVGGSMIGGMKETQEMI  313 (361)
Q Consensus       240 ~---~~~~~--~g~d~vid~~g~~~~~~~~~~~l~~~G~~v~~g~~~-~~~~~~~~~~~~~~~~i~g~~~~~~~~~~~~~  313 (361)
                      .   +.+++  +++|++||++|+...+..++++++++|+++.+|... .. .++...++.+++++.|+...+.+++++++
T Consensus       228 ~~~~~~~~~~~~~~d~vi~~~g~~~~~~~~~~~l~~~G~iv~~g~~~~~~-~~~~~~~~~~~~~i~g~~~~~~~~~~~~~  306 (347)
T 1jvb_A          228 PLAEIRRITESKGVDAVIDLNNSEKTLSVYPKALAKQGKYVMVGLFGADL-HYHAPLITLSEIQFVGSLVGNQSDFLGIM  306 (347)
T ss_dssp             HHHHHHHHTTTSCEEEEEESCCCHHHHTTGGGGEEEEEEEEECCSSCCCC-CCCHHHHHHHTCEEEECCSCCHHHHHHHH
T ss_pred             HHHHHHHHhcCCCceEEEECCCCHHHHHHHHHHHhcCCEEEEECCCCCCC-CCCHHHHHhCceEEEEEeccCHHHHHHHH
Confidence            4   44555  479999999999855889999999999999999865 45 67777788899999999988889999999


Q ss_pred             HHHHcCCCceeE-EEEecccHHHHHHHHHcCCCceEEEEEe
Q 018067          314 DFAAKHNIRADI-EVIPADYVNTALERLAKADVRYRFVIDV  353 (361)
Q Consensus       314 ~ll~~~~~~~~~-~~~~l~~~~~a~~~~~~~~~~gkvvi~~  353 (361)
                      +++++|++++.+ ++|+|+++++||+.+++++..||+|+.+
T Consensus       307 ~l~~~g~l~~~i~~~~~l~~~~~A~~~~~~~~~~gKvvl~~  347 (347)
T 1jvb_A          307 RLAEAGKVKPMITKTMKLEEANEAIDNLENFKAIGRQVLIP  347 (347)
T ss_dssp             HHHHTTSSCCCCEEEEEGGGHHHHHHHHHTTCCCSEEEEEC
T ss_pred             HHHHcCCCCceEEEEEcHHHHHHHHHHHHCCCCcceEEecC
Confidence            999999999887 8999999999999999998889999974

>1e3j_A NADP(H)-dependent ketose reductase; oxidoreductase, fructose reduction; 2.3A {Bemisia argentifolii} SCOP: b.35.1.2 c.2.1.1

Probab=100.00  E-value=1.7e-56  Score=417.68  Aligned_cols=331  Identities=23%  Similarity=0.284  Sum_probs=283.2

Q ss_pred             ccceeeeeecCCCCCccceeeccCCCCCCeEEEEEeeeccCcchHHhHhc-CCC--CCCCCCcccccccEEEEEeCCCCC
Q 018067           10 PKNAFGWAAKDTSGVLSPFHFSRRATGEKDVTFKVTHCGICHSDLHMIKN-EWG--NTIYPIVPGHEIVGVVTEVGSKVS   86 (361)
Q Consensus        10 ~~~~~~~~~~~~~~~l~~~~~~~p~~~~~evlV~v~~~~i~~~D~~~~~g-~~~--~~~~p~~lG~e~~G~Vv~vG~~v~   86 (361)
                      +|+++.+..   ++.++++++|.|+|+++||||||+++|||++|++.+.+ ..+  ...+|.++|||++|+|+++|++|+
T Consensus         4 ~mka~~~~~---~~~l~~~~~~~P~~~~~eVlVkv~a~gi~~~D~~~~~~g~~~~~~~~~p~v~G~E~~G~V~~vG~~v~   80 (352)
T 1e3j_A            4 DNLSAVLYK---QNDLRLEQRPIPEPKEDEVLLQMAYVGICGSDVHYYEHGRIADFIVKDPMVIGHEASGTVVKVGKNVK   80 (352)
T ss_dssp             CCEEEEEEE---TTEEEEEECCCCCCCTTEEEEEEEEEEECHHHHHHHHHSBSSSCBCCSCEECCCEEEEEEEEECTTCC
T ss_pred             cCEEEEEEc---CCcEEEEEecCCCCCCCeEEEEEEEEEEChhhHHHHcCCCCccccCCCCccccccceEEEEEeCCCCC
Confidence            588877754   56788999999999999999999999999999998874 332  135789999999999999999999


Q ss_pred             CCCCCCEEEeccccCCCCCCcccccCCCCCCcchhcccccccCCCC-cCCCcceeEEeecCCceEECCCCCCcccccccc
Q 018067           87 KFKVGDKVGVGCMVGSCRSCDSCAIDLENYCPKVIMTYANKYHDGT-ITYGGYSDIMVADEHFVVRIPEGTPLDATAPLL  165 (361)
Q Consensus        87 ~~~~GdrV~~~~~~~~c~~c~~c~~~~~~~c~~~~~~~~~~~~~~~-~~~g~~a~~v~v~~~~~~~ip~~~~~~~aa~l~  165 (361)
                      +|++||||++.+.. +||.|.+|++|.+++|++..+.       |. ...|+|+||+.+++++++++|+++++++||.+ 
T Consensus        81 ~~~vGdrV~~~~~~-~cg~C~~C~~g~~~~C~~~~~~-------g~~~~~G~~aey~~v~~~~~~~iP~~~~~~~aa~~-  151 (352)
T 1e3j_A           81 HLKKGDRVAVEPGV-PCRRCQFCKEGKYNLCPDLTFC-------ATPPDDGNLARYYVHAADFCHKLPDNVSLEEGALL-  151 (352)
T ss_dssp             SCCTTCEEEECCEE-CCSSSHHHHTTCGGGCTTCEET-------TBTTBCCSCBSEEEEEGGGEEECCTTSCHHHHHTH-
T ss_pred             CCCCCCEEEEcCcC-CCCCChhhhCcCcccCCCCccc-------CcCCCCccceeEEEeChHHeEECcCCCCHHHHHhh-
Confidence            99999999987765 8999999999999999986432       21 24799999999999999999999999998865 


Q ss_pred             hhhhhhhhHhhhcCCCCCCCEEEEEcCChHHHHHHHHHHHcCCeEEEEeCCchhHHHHHHHcCCCEEecCCC-H---HHH
Q 018067          166 CAGITVYSPLRFYGLDKPGMHVGVVGLGGLGHVAVKFAKAMGVKVTVISTSPSKKSEAIERLGADSFLVSRD-Q---DEM  241 (361)
Q Consensus       166 ~~~~ta~~~l~~~~~~~~g~~vlV~Gag~vG~~a~~la~~~g~~vi~~~~~~~~~~~~~~~~g~~~vv~~~~-~---~~~  241 (361)
                      .++.|||++++ ..++++|++|||+|+|++|++++|+|+.+|++|+++++++++++. ++++|++.++++++ .   +.+
T Consensus       152 ~~~~ta~~al~-~~~~~~g~~VlV~GaG~vG~~a~qla~~~Ga~Vi~~~~~~~~~~~-~~~lGa~~~~~~~~~~~~~~~i  229 (352)
T 1e3j_A          152 EPLSVGVHACR-RAGVQLGTTVLVIGAGPIGLVSVLAAKAYGAFVVCTARSPRRLEV-AKNCGADVTLVVDPAKEEESSI  229 (352)
T ss_dssp             HHHHHHHHHHH-HHTCCTTCEEEEECCSHHHHHHHHHHHHTTCEEEEEESCHHHHHH-HHHTTCSEEEECCTTTSCHHHH
T ss_pred             chHHHHHHHHH-hcCCCCCCEEEEECCCHHHHHHHHHHHHcCCEEEEEcCCHHHHHH-HHHhCCCEEEcCcccccHHHHH
Confidence            57889999995 456899999999999999999999999999999888888776554 47999999998774 3   334


Q ss_pred             HHhc-----CCccEEEEcCCCcccHHHHHhccccCCEEEEecCCCCCcccChHHHHhCCcEEEecccCCHHHHHHHHHHH
Q 018067          242 QAAM-----GTMDGIIDTVSAVHPLMPLIGLLKSQGKLVLVGAPEKPLELPAFSLLMGRKIVGGSMIGGMKETQEMIDFA  316 (361)
Q Consensus       242 ~~~~-----~g~d~vid~~g~~~~~~~~~~~l~~~G~~v~~g~~~~~~~~~~~~~~~~~~~i~g~~~~~~~~~~~~~~ll  316 (361)
                      .+.+     .++|++||++|...++..++++++++|+++.+|.......++...++.+++++.|+... .++++++++++
T Consensus       230 ~~~~~~~~g~g~D~vid~~g~~~~~~~~~~~l~~~G~iv~~G~~~~~~~~~~~~~~~~~~~i~g~~~~-~~~~~~~~~l~  308 (352)
T 1e3j_A          230 IERIRSAIGDLPNVTIDCSGNEKCITIGINITRTGGTLMLVGMGSQMVTVPLVNACAREIDIKSVFRY-CNDYPIALEMV  308 (352)
T ss_dssp             HHHHHHHSSSCCSEEEECSCCHHHHHHHHHHSCTTCEEEECSCCSSCCCCCHHHHHTTTCEEEECCSC-SSCHHHHHHHH
T ss_pred             HHHhccccCCCCCEEEECCCCHHHHHHHHHHHhcCCEEEEEecCCCCccccHHHHHhcCcEEEEeccc-hHHHHHHHHHH
Confidence            4433     47999999999986689999999999999999986555667777888999999998765 46799999999


Q ss_pred             HcCCCc--eeE-EEEecccHHHHHHHHHcCC-CceEEEEEeCC
Q 018067          317 AKHNIR--ADI-EVIPADYVNTALERLAKAD-VRYRFVIDVAN  355 (361)
Q Consensus       317 ~~~~~~--~~~-~~~~l~~~~~a~~~~~~~~-~~gkvvi~~~~  355 (361)
                      ++|+++  +.+ ++|||+++++||+.+.+++ ..+|+|+.++.
T Consensus       309 ~~g~i~~~~~i~~~~~l~~~~~A~~~~~~~~~~~~Kvvi~~~~  351 (352)
T 1e3j_A          309 ASGRCNVKQLVTHSFKLEQTVDAFEAARKKADNTIKVMISCRQ  351 (352)
T ss_dssp             HTTSCCCGGGEEEEEEGGGHHHHHHHHHHCCTTCSEEEEECCC
T ss_pred             HcCCCChHHheeEEecHHHHHHHHHHHhcCCCCceEEEEecCC
Confidence            999875  445 8999999999999999987 57999998863

>1pl8_A Human sorbitol dehydrogenase; NAD, oxidoreductase; HET: NAD; 1.90A {Homo sapiens} SCOP: b.35.1.2 c.2.1.1 PDB: 1pl7_A 1pl6_A* 3qe3_A

Probab=100.00  E-value=1.3e-56  Score=419.09  Aligned_cols=331  Identities=23%  Similarity=0.307  Sum_probs=281.9

Q ss_pred             ccceeeeeecCCCCCccceeeccCCCCCCeEEEEEeeeccCcchHHhHhcC-CC--CCCCCCcccccccEEEEEeCCCCC
Q 018067           10 PKNAFGWAAKDTSGVLSPFHFSRRATGEKDVTFKVTHCGICHSDLHMIKNE-WG--NTIYPIVPGHEIVGVVTEVGSKVS   86 (361)
Q Consensus        10 ~~~~~~~~~~~~~~~l~~~~~~~p~~~~~evlV~v~~~~i~~~D~~~~~g~-~~--~~~~p~~lG~e~~G~Vv~vG~~v~   86 (361)
                      +|+++.+..   ++.++++++|.|+|+++||||||+++|||++|++.+.+. .+  ...+|.++|||++|+|+++|++|+
T Consensus         7 ~mka~~~~~---~~~l~~~~~~~P~~~~~eVlVkv~a~gi~~~D~~~~~g~~~~~~~~~~p~v~G~E~~G~V~~vG~~V~   83 (356)
T 1pl8_A            7 NNLSLVVHG---PGDLRLENYPIPEPGPNEVLLRMHSVGICGSDVHYWEYGRIGNFIVKKPMVLGHEASGTVEKVGSSVK   83 (356)
T ss_dssp             CCEEEEEEE---TTEEEEEECCCCCCCTTEEEEEEEEEEECHHHHHHHHHSEETTEECSSCEECCCEEEEEEEEECTTCC
T ss_pred             CceEEEEec---CCcEEEEEccCCCCCCCeEEEEEEEeeeCHHHHHHHcCCCCCCccCCCCcccccceEEEEEEECCCCC
Confidence            355555543   567889999999999999999999999999999988753 22  135789999999999999999999


Q ss_pred             CCCCCCEEEeccccCCCCCCcccccCCCCCCcchhcccccccCCCC-cCCCcceeEEeecCCceEECCCCCCcccccccc
Q 018067           87 KFKVGDKVGVGCMVGSCRSCDSCAIDLENYCPKVIMTYANKYHDGT-ITYGGYSDIMVADEHFVVRIPEGTPLDATAPLL  165 (361)
Q Consensus        87 ~~~~GdrV~~~~~~~~c~~c~~c~~~~~~~c~~~~~~~~~~~~~~~-~~~g~~a~~v~v~~~~~~~ip~~~~~~~aa~l~  165 (361)
                      +|++||||++.+.. +|++|.+|++|.+++|++..+.       |. ...|+|+||+.+|+++++++|+++++++||.+ 
T Consensus        84 ~~~vGdrV~~~~~~-~cg~C~~C~~g~~~~C~~~~~~-------g~~~~~G~~aey~~v~~~~~~~iP~~l~~~~aa~~-  154 (356)
T 1pl8_A           84 HLKPGDRVAIEPGA-PRENDEFCKMGRYNLSPSIFFC-------ATPPDDGNLCRFYKHNAAFCYKLPDNVTFEEGALI-  154 (356)
T ss_dssp             SCCTTCEEEECSEE-CSSCCHHHHTTCGGGCTTCEET-------TBTTBCCSCBSEEEEEGGGEEECCTTSCHHHHHHH-
T ss_pred             CCCCCCEEEEeccC-CCCCChHHHCcCcccCCCcccc-------CcCCCCCccccEEEeehHHEEECcCCCCHHHHHhh-
Confidence            99999999987766 8999999999999999986432       21 24799999999999999999999999998865 


Q ss_pred             hhhhhhhhHhhhcCCCCCCCEEEEEcCChHHHHHHHHHHHcCC-eEEEEeCCchhHHHHHHHcCCCEEecCC---CHHHH
Q 018067          166 CAGITVYSPLRFYGLDKPGMHVGVVGLGGLGHVAVKFAKAMGV-KVTVISTSPSKKSEAIERLGADSFLVSR---DQDEM  241 (361)
Q Consensus       166 ~~~~ta~~~l~~~~~~~~g~~vlV~Gag~vG~~a~~la~~~g~-~vi~~~~~~~~~~~~~~~~g~~~vv~~~---~~~~~  241 (361)
                      .++.|||++++ ..++++|++|||+|+|++|++++|+|+.+|+ +|+++++++++++ +++++|++++++++   +.+..
T Consensus       155 ~~~~ta~~al~-~~~~~~g~~VlV~GaG~vG~~aiqlak~~Ga~~Vi~~~~~~~~~~-~a~~lGa~~vi~~~~~~~~~~~  232 (356)
T 1pl8_A          155 EPLSVGIHACR-RGGVTLGHKVLVCGAGPIGMVTLLVAKAMGAAQVVVTDLSATRLS-KAKEIGADLVLQISKESPQEIA  232 (356)
T ss_dssp             HHHHHHHHHHH-HHTCCTTCEEEEECCSHHHHHHHHHHHHTTCSEEEEEESCHHHHH-HHHHTTCSEEEECSSCCHHHHH
T ss_pred             chHHHHHHHHH-hcCCCCCCEEEEECCCHHHHHHHHHHHHcCCCEEEEECCCHHHHH-HHHHhCCCEEEcCcccccchHH
Confidence            67889999995 4568999999999999999999999999999 8999888877654 45899999999987   34433


Q ss_pred             ---HHhc-CCccEEEEcCCCcccHHHHHhccccCCEEEEecCCCCCcccChHHHHhCCcEEEecccCCHHHHHHHHHHHH
Q 018067          242 ---QAAM-GTMDGIIDTVSAVHPLMPLIGLLKSQGKLVLVGAPEKPLELPAFSLLMGRKIVGGSMIGGMKETQEMIDFAA  317 (361)
Q Consensus       242 ---~~~~-~g~d~vid~~g~~~~~~~~~~~l~~~G~~v~~g~~~~~~~~~~~~~~~~~~~i~g~~~~~~~~~~~~~~ll~  317 (361)
                         .+.+ +++|+|||++|+...+..++++++++|+++.+|.......++...++.+++++.|+... .+++++++++++
T Consensus       233 ~~i~~~~~~g~D~vid~~g~~~~~~~~~~~l~~~G~iv~~G~~~~~~~~~~~~~~~~~~~i~g~~~~-~~~~~~~~~l~~  311 (356)
T 1pl8_A          233 RKVEGQLGCKPEVTIECTGAEASIQAGIYATRSGGTLVLVGLGSEMTTVPLLHAAIREVDIKGVFRY-CNTWPVAISMLA  311 (356)
T ss_dssp             HHHHHHHTSCCSEEEECSCCHHHHHHHHHHSCTTCEEEECSCCCSCCCCCHHHHHHTTCEEEECCSC-SSCHHHHHHHHH
T ss_pred             HHHHHHhCCCCCEEEECCCChHHHHHHHHHhcCCCEEEEEecCCCCCccCHHHHHhcceEEEEeccc-HHHHHHHHHHHH
Confidence               3333 48999999999986689999999999999999986555677777888999999998765 467999999999


Q ss_pred             cCCCc--eeE-EEEecccHHHHHHHHHcCCCceEEEEEeCCc
Q 018067          318 KHNIR--ADI-EVIPADYVNTALERLAKADVRYRFVIDVANT  356 (361)
Q Consensus       318 ~~~~~--~~~-~~~~l~~~~~a~~~~~~~~~~gkvvi~~~~~  356 (361)
                      +|+++  +.+ ++|+|+++++||+.++++ ..||+|+.++++
T Consensus       312 ~g~i~~~~~i~~~~~l~~~~~A~~~~~~~-~~gKvvi~~~~~  352 (356)
T 1pl8_A          312 SKSVNVKPLVTHRFPLEKALEAFETFKKG-LGLKIMLKCDPS  352 (356)
T ss_dssp             TTSCCCGGGEEEEEEGGGHHHHHHHHHTT-CCSEEEEECCTT
T ss_pred             cCCCChHHheEEEecHHHHHHHHHHHhCC-CceEEEEeCCCC
Confidence            99975  455 899999999999999988 679999999754

>4a2c_A Galactitol-1-phosphate 5-dehydrogenase; oxidoreductase, metal binding-site; 1.87A {Escherichia coli}

Probab=100.00  E-value=2e-56  Score=416.57  Aligned_cols=329  Identities=21%  Similarity=0.285  Sum_probs=279.0

Q ss_pred             cceeeeeecCCCCCccceeeccCC-CCCCeEEEEEeeeccCcchHHhHhcCCCCCCCCCcccccccEEEEEeCCCCCCCC
Q 018067           11 KNAFGWAAKDTSGVLSPFHFSRRA-TGEKDVTFKVTHCGICHSDLHMIKNEWGNTIYPIVPGHEIVGVVTEVGSKVSKFK   89 (361)
Q Consensus        11 ~~~~~~~~~~~~~~l~~~~~~~p~-~~~~evlV~v~~~~i~~~D~~~~~g~~~~~~~p~~lG~e~~G~Vv~vG~~v~~~~   89 (361)
                      ||++.+   ..++.++++++|.|+ ++||||||||+++|||++|++.+.|..+ ..+|+++|||++|+|+++|++|++|+
T Consensus         1 MkAvv~---~~~g~l~v~e~p~P~~~~~~eVlVkv~a~gi~~sD~~~~~g~~~-~~~P~i~G~E~~G~V~~vG~~V~~~~   76 (346)
T 4a2c_A            1 MKSVVN---DTDGIVRVAESVIPEIKHQDEVRVKIASSGLCGSDLPRIFKNGA-HYYPITLGHEFSGYIDAVGSGVDDLH   76 (346)
T ss_dssp             CEEEEE---CSSSCEEEEECCCCCCCSTTEEEEEEEEEECCTTHHHHHHSSCS-SSSSBCCCCEEEEEEEEECTTCCSCC
T ss_pred             CCEEEE---ecCCCEEEEEEeCCCCCCcCEEEEEEEEEEECHHHHHHHcCCCC-CCCCccccEEEEEEEEEECCCccccc
Confidence            677765   456679999999998 4799999999999999999999988665 47899999999999999999999999


Q ss_pred             CCCEEEeccccCCCCCCcccccCCCCCCcchhcccccccCCCCcCCCcceeEEeecCCceEECCCCCCcccccccchhhh
Q 018067           90 VGDKVGVGCMVGSCRSCDSCAIDLENYCPKVIMTYANKYHDGTITYGGYSDIMVADEHFVVRIPEGTPLDATAPLLCAGI  169 (361)
Q Consensus        90 ~GdrV~~~~~~~~c~~c~~c~~~~~~~c~~~~~~~~~~~~~~~~~~g~~a~~v~v~~~~~~~ip~~~~~~~aa~l~~~~~  169 (361)
                      +||||++.+.. .|++|.+|..|.+++|.+..+.       |...+|+|+||+++|+++++++|+++++++||.+. .+.
T Consensus        77 ~GdrV~~~~~~-~~g~c~~c~~g~~~~c~~~~~~-------g~~~~G~~aey~~v~~~~~~~iP~~l~~~~aa~l~-~~~  147 (346)
T 4a2c_A           77 PGDAVACVPLL-PCFTCPECLKGFYSQCAKYDFI-------GSRRDGGFAEYIVVKRKNVFALPTDMPIEDGAFIE-PIT  147 (346)
T ss_dssp             TTCEEEECCEE-CCSCSHHHHTTCGGGCSSCEEB-------TTTBCCSSBSEEEEEGGGEEECCTTSCGGGGGGHH-HHH
T ss_pred             CCCeEEeeecc-CCCCcccccCCccccCCCcccc-------cCCCCcccccccccchheEEECCCCCCHHHHHhch-HHH
Confidence            99999887765 8999999999999999987543       55678999999999999999999999999998765 344


Q ss_pred             hhhhHhhhcCCCCCCCEEEEEcCChHHHHHHHHHHHcCCeEEEEeCCchhHHHHHHHcCCCEEecCCCHH---HHHHhcC
Q 018067          170 TVYSPLRFYGLDKPGMHVGVVGLGGLGHVAVKFAKAMGVKVTVISTSPSKKSEAIERLGADSFLVSRDQD---EMQAAMG  246 (361)
Q Consensus       170 ta~~~l~~~~~~~~g~~vlV~Gag~vG~~a~~la~~~g~~vi~~~~~~~~~~~~~~~~g~~~vv~~~~~~---~~~~~~~  246 (361)
                      ++++++ ....+++|++|||+|+|++|++++|+|+++|++++++++..+++.++++++|+++++++++.+   .+..+++
T Consensus       148 ~~~~~~-~~~~~~~g~~VlV~GaG~vG~~aiq~ak~~G~~~vi~~~~~~~k~~~a~~lGa~~~i~~~~~~~~~~~~~~~~  226 (346)
T 4a2c_A          148 VGLHAF-HLAQGCENKNVIIIGAGTIGLLAIQCAVALGAKSVTAIDISSEKLALAKSFGAMQTFNSSEMSAPQMQSVLRE  226 (346)
T ss_dssp             HHHHHH-HHTTCCTTSEEEEECCSHHHHHHHHHHHHTTCSEEEEEESCHHHHHHHHHTTCSEEEETTTSCHHHHHHHHGG
T ss_pred             HHHHHH-HHhccCCCCEEEEECCCCcchHHHHHHHHcCCcEEEEEechHHHHHHHHHcCCeEEEeCCCCCHHHHHHhhcc
Confidence            445544 456689999999999999999999999999997655554444556777999999999988743   4444543


Q ss_pred             --CccEEEEcCCCcccHHHHHhccccCCEEEEecCCCCCccc---ChHHHHhCCcEEEecccCC-----HHHHHHHHHHH
Q 018067          247 --TMDGIIDTVSAVHPLMPLIGLLKSQGKLVLVGAPEKPLEL---PAFSLLMGRKIVGGSMIGG-----MKETQEMIDFA  316 (361)
Q Consensus       247 --g~d~vid~~g~~~~~~~~~~~l~~~G~~v~~g~~~~~~~~---~~~~~~~~~~~i~g~~~~~-----~~~~~~~~~ll  316 (361)
                        ++|++||++|.+.+++.++++++++|+++.+|.......+   +...++.|++++.|++...     .++++++++++
T Consensus       227 ~~g~d~v~d~~G~~~~~~~~~~~l~~~G~~v~~g~~~~~~~~~~~~~~~~~~k~~~i~G~~~~~~~~~~~~~~~~~~~l~  306 (346)
T 4a2c_A          227 LRFNQLILETAGVPQTVELAVEIAGPHAQLALVGTLHQDLHLTSATFGKILRKELTVIGSWMNYSSPWPGQEWETASRLL  306 (346)
T ss_dssp             GCSSEEEEECSCSHHHHHHHHHHCCTTCEEEECCCCSSCEEECHHHHHHHHHHTCEEEECCTTCCSSTTCHHHHHHHHHH
T ss_pred             cCCcccccccccccchhhhhhheecCCeEEEEEeccCCCccccccCHHHHhhceeEEEEEeccccCcchHHHHHHHHHHH
Confidence              7999999999988799999999999999999987665433   4455788999999986532     46899999999


Q ss_pred             HcCCCce--eE-EEEecccHHHHHHHHHcCCCceEEEEEe
Q 018067          317 AKHNIRA--DI-EVIPADYVNTALERLAKADVRYRFVIDV  353 (361)
Q Consensus       317 ~~~~~~~--~~-~~~~l~~~~~a~~~~~~~~~~gkvvi~~  353 (361)
                      ++|++++  .+ ++|+|+++++||+.+++++..||+||.+
T Consensus       307 ~~g~l~~~~lI~~~~~l~~~~~A~~~l~~~~~~GKvVl~P  346 (346)
T 4a2c_A          307 TERKLSLEPLIAHRGSFESFAQAVRDIARNAMPGKVLLIP  346 (346)
T ss_dssp             HTTCSCCGGGEEEEECHHHHHHHHHHHTTSCCCSEEEECC
T ss_pred             HcCCCCCCccEeEEEeHHHHHHHHHHHHcCCCceEEEEEC
Confidence            9998864  35 8999999999999999999889999864

>3uog_A Alcohol dehydrogenase; structural genomics, protein structure initiative, PSI-biolo YORK structural genomics research consortium; 2.20A {Sinorhizobium meliloti 1021}

Probab=100.00  E-value=2.4e-56  Score=418.16  Aligned_cols=334  Identities=22%  Similarity=0.289  Sum_probs=290.4

Q ss_pred             CCCCcccceeeeeecCCCCCccceeeccCCCCCCeEEEEEeeeccCcchHHhHhcCCC-CCCCCCcccccccEEEEEeCC
Q 018067            5 PEQEHPKNAFGWAAKDTSGVLSPFHFSRRATGEKDVTFKVTHCGICHSDLHMIKNEWG-NTIYPIVPGHEIVGVVTEVGS   83 (361)
Q Consensus         5 ~~~~~~~~~~~~~~~~~~~~l~~~~~~~p~~~~~evlV~v~~~~i~~~D~~~~~g~~~-~~~~p~~lG~e~~G~Vv~vG~   83 (361)
                      ..++.+|+++.+..+ +|+.++++++|.|+|+++||||||+++|||++|++.++|.++ ...+|.++|||++|+|+++|+
T Consensus        22 ~~m~~~mkA~~~~~~-~~~~l~~~e~p~P~~~~~eVlVkv~a~gi~~~D~~~~~g~~~~~~~~P~v~GhE~~G~V~~vG~  100 (363)
T 3uog_A           22 SMMSKWMQEWSTETV-APHDLKLAERPVPEAGEHDIIVRTLAVSLNYRDKLVLETGMGLDLAFPFVPASDMSGVVEAVGK  100 (363)
T ss_dssp             -CCCSEEEEEEBSCT-TTTCCEEEEEECCCCCTTEEEEEEEEEECCHHHHHHHHHCTTCCCCSSBCCCCEEEEEEEEECT
T ss_pred             ccCchhhEEEEEccC-CCCCcEEEeeeCCCCCCCEEEEEEEEEecCHHHHHHhcCCCCCCCCCCcCcccceEEEEEEECC
Confidence            345677888888775 678899999999999999999999999999999999998765 357899999999999999999


Q ss_pred             CCCCCCCCCEEEeccccCCCCCCcccccCCCCCCcchhcccccccCCCCcCCCcceeEEeecCCceEECCCCCCcccccc
Q 018067           84 KVSKFKVGDKVGVGCMVGSCRSCDSCAIDLENYCPKVIMTYANKYHDGTITYGGYSDIMVADEHFVVRIPEGTPLDATAP  163 (361)
Q Consensus        84 ~v~~~~~GdrV~~~~~~~~c~~c~~c~~~~~~~c~~~~~~~~~~~~~~~~~~g~~a~~v~v~~~~~~~ip~~~~~~~aa~  163 (361)
                      +|++|++||||++.+..       +|..|. +.|.+....   ....|...+|+|+||+.+++++++++|+++++++||+
T Consensus       101 ~v~~~~vGDrV~~~~~~-------~c~~g~-~~c~~~~~~---~~~~g~~~~G~~aey~~v~~~~~~~iP~~~~~~~aa~  169 (363)
T 3uog_A          101 SVTRFRPGDRVISTFAP-------GWLDGL-RPGTGRTPA---YETLGGAHPGVLSEYVVLPEGWFVAAPKSLDAAEAST  169 (363)
T ss_dssp             TCCSCCTTCEEEECSST-------TCCSSS-CCSCSSCCC---CCCTTTTSCCCCBSEEEEEGGGEEECCTTSCHHHHHT
T ss_pred             CCCCCCCCCEEEEeccc-------cccccc-ccccccccc---ccccCcCCCCcceeEEEechHHeEECCCCCCHHHHhh
Confidence            99999999999875432       678888 899753211   0112445789999999999999999999999999999


Q ss_pred             cchhhhhhhhHhhhcCCCCCCCEEEEEcCChHHHHHHHHHHHcCCeEEEEeCCchhHHHHHHHcCCCEEecCCCHH---H
Q 018067          164 LLCAGITVYSPLRFYGLDKPGMHVGVVGLGGLGHVAVKFAKAMGVKVTVISTSPSKKSEAIERLGADSFLVSRDQD---E  240 (361)
Q Consensus       164 l~~~~~ta~~~l~~~~~~~~g~~vlV~Gag~vG~~a~~la~~~g~~vi~~~~~~~~~~~~~~~~g~~~vv~~~~~~---~  240 (361)
                      +++++.|||+++.+.+++++|++|||+|+|++|++++|+|+.+|++|+++++++++++. ++++|++.+++...++   .
T Consensus       170 l~~~~~ta~~al~~~~~~~~g~~VlV~G~G~vG~~a~qla~~~Ga~Vi~~~~~~~~~~~-~~~lGa~~vi~~~~~~~~~~  248 (363)
T 3uog_A          170 LPCAGLTAWFALVEKGHLRAGDRVVVQGTGGVALFGLQIAKATGAEVIVTSSSREKLDR-AFALGADHGINRLEEDWVER  248 (363)
T ss_dssp             TTTHHHHHHHHHTTTTCCCTTCEEEEESSBHHHHHHHHHHHHTTCEEEEEESCHHHHHH-HHHHTCSEEEETTTSCHHHH
T ss_pred             cccHHHHHHHHHHHhcCCCCCCEEEEECCCHHHHHHHHHHHHcCCEEEEEecCchhHHH-HHHcCCCEEEcCCcccHHHH
Confidence            99999999999987788999999999999999999999999999999999988877655 5889999999854333   4


Q ss_pred             HHHhcC--CccEEEEcCCCcccHHHHHhccccCCEEEEecCCCCC-cccChHHHHhCCcEEEecccCCHHHHHHHHHHHH
Q 018067          241 MQAAMG--TMDGIIDTVSAVHPLMPLIGLLKSQGKLVLVGAPEKP-LELPAFSLLMGRKIVGGSMIGGMKETQEMIDFAA  317 (361)
Q Consensus       241 ~~~~~~--g~d~vid~~g~~~~~~~~~~~l~~~G~~v~~g~~~~~-~~~~~~~~~~~~~~i~g~~~~~~~~~~~~~~ll~  317 (361)
                      +.++++  ++|++||++|... +..++++++++|+++.+|..... ..++...++.+++++.|+...+.+++++++++++
T Consensus       249 v~~~~~g~g~D~vid~~g~~~-~~~~~~~l~~~G~iv~~G~~~~~~~~~~~~~~~~~~~~i~g~~~~~~~~~~~~~~l~~  327 (363)
T 3uog_A          249 VYALTGDRGADHILEIAGGAG-LGQSLKAVAPDGRISVIGVLEGFEVSGPVGPLLLKSPVVQGISVGHRRALEDLVGAVD  327 (363)
T ss_dssp             HHHHHTTCCEEEEEEETTSSC-HHHHHHHEEEEEEEEEECCCSSCEECCBTTHHHHTCCEEEECCCCCHHHHHHHHHHHH
T ss_pred             HHHHhCCCCceEEEECCChHH-HHHHHHHhhcCCEEEEEecCCCcccCcCHHHHHhCCcEEEEEecCCHHHHHHHHHHHH
Confidence            445554  7999999999655 99999999999999999987653 5677777888999999999999999999999999


Q ss_pred             cCCCceeE-EEEecccHHHHHHHHHcCCCceEEEEEe
Q 018067          318 KHNIRADI-EVIPADYVNTALERLAKADVRYRFVIDV  353 (361)
Q Consensus       318 ~~~~~~~~-~~~~l~~~~~a~~~~~~~~~~gkvvi~~  353 (361)
                      ++++++.+ ++|+|+++++||+.+.+++ .||+||++
T Consensus       328 ~g~l~~~i~~~~~l~~~~~A~~~~~~~~-~gKvvi~~  363 (363)
T 3uog_A          328 RLGLKPVIDMRYKFTEVPEALAHLDRGP-FGKVVIEF  363 (363)
T ss_dssp             HHTCCCCEEEEEEGGGHHHHHHTGGGCC-SBEEEEEC
T ss_pred             cCCCccceeeEEcHHHHHHHHHHHHcCC-CccEEEeC
Confidence            99999887 8999999999999999999 89999975

>3m6i_A L-arabinitol 4-dehydrogenase; medium chain dehydrogenase/reductase, oxidoreductase; HET: NAD; 2.60A {Neurospora crassa}

Probab=100.00  E-value=8.7e-57  Score=421.51  Aligned_cols=333  Identities=18%  Similarity=0.213  Sum_probs=280.7

Q ss_pred             CCcccceeeeeecCCCCCccceeeccC--------CCCCCeEEEEEeeeccCcchHHhHhcC-CC--CCCCCCccccccc
Q 018067            7 QEHPKNAFGWAAKDTSGVLSPFHFSRR--------ATGEKDVTFKVTHCGICHSDLHMIKNE-WG--NTIYPIVPGHEIV   75 (361)
Q Consensus         7 ~~~~~~~~~~~~~~~~~~l~~~~~~~p--------~~~~~evlV~v~~~~i~~~D~~~~~g~-~~--~~~~p~~lG~e~~   75 (361)
                      ++.+|+++.+   .+|+.++++++|.|        +|+++||||||+++|||++|++.+++. .+  ...+|.++|||++
T Consensus         5 ~~~~mka~~~---~~~~~l~~~~~~~P~~~~~~~~~~~~~eVlVkv~a~gi~~~D~~~~~~~~~~~~~~~~p~v~G~E~~   81 (363)
T 3m6i_A            5 ASKTNIGVFT---NPQHDLWISEASPSLESVQKGEELKEGEVTVAVRSTGICGSDVHFWKHGCIGPMIVECDHVLGHESA   81 (363)
T ss_dssp             CCSCCEEEEE---CTTCCEEEEECSSCHHHHHHTCSCCTTEEEEEEEEEECCHHHHHHHHHSBSSSCBCCSCEECCCEEE
T ss_pred             CcccceeEEE---eCCCcEEEEEecCCccccccCCCcCCCeEEEEEeEEeecHhhHHHHcCCCCCCccCCCCcccCcceE
Confidence            3445555554   46788999999999        999999999999999999999988743 22  2367899999999


Q ss_pred             EEEEEeCCCCCCCCCCCEEEeccccCCCCCCcccccCCCCCCcchhcccccccCCCCcCCCcceeEEeecCCceEECCCC
Q 018067           76 GVVTEVGSKVSKFKVGDKVGVGCMVGSCRSCDSCAIDLENYCPKVIMTYANKYHDGTITYGGYSDIMVADEHFVVRIPEG  155 (361)
Q Consensus        76 G~Vv~vG~~v~~~~~GdrV~~~~~~~~c~~c~~c~~~~~~~c~~~~~~~~~~~~~~~~~~g~~a~~v~v~~~~~~~ip~~  155 (361)
                      |+|+++|++|++|++||||++.+.. +|++|.+|++|.++.|.+..+.  +    .....|+|+||+.+|+++++++|+ 
T Consensus        82 G~V~~vG~~v~~~~vGdrV~~~~~~-~cg~C~~c~~g~~~~c~~~~~~--g----~~~~~G~~aey~~v~~~~~~~iP~-  153 (363)
T 3m6i_A           82 GEVIAVHPSVKSIKVGDRVAIEPQV-ICNACEPCLTGRYNGCERVDFL--S----TPPVPGLLRRYVNHPAVWCHKIGN-  153 (363)
T ss_dssp             EEEEEECTTCCSCCTTCEEEECCEE-CCSCSHHHHTTCGGGCTTCEET--T----STTSCCSCBSEEEEEGGGEEECTT-
T ss_pred             EEEEEECCCCCCCCCCCEEEEeccc-CCCCCHHHHCcCcccCCCcccc--C----CCCCCccceeEEEEehhhEEECCC-
Confidence            9999999999999999999987765 9999999999999999986542  1    123679999999999999999999 


Q ss_pred             CCcccccccchhhhhhhhHhhhcCCCCCCCEEEEEcCChHHHHHHHHHHHcCCe-EEEEeCCchhHHHHHHHcCCCEEec
Q 018067          156 TPLDATAPLLCAGITVYSPLRFYGLDKPGMHVGVVGLGGLGHVAVKFAKAMGVK-VTVISTSPSKKSEAIERLGADSFLV  234 (361)
Q Consensus       156 ~~~~~aa~l~~~~~ta~~~l~~~~~~~~g~~vlV~Gag~vG~~a~~la~~~g~~-vi~~~~~~~~~~~~~~~~g~~~vv~  234 (361)
                      +++++||.+ .++.|||++++ ..++++|++|||+|+|++|++++|+|+.+|++ |++++.++++++. ++++ ++.+++
T Consensus       154 ~s~~~aa~~-~~~~ta~~~l~-~~~~~~g~~VlV~GaG~vG~~aiqlak~~Ga~~Vi~~~~~~~~~~~-a~~l-~~~~~~  229 (363)
T 3m6i_A          154 MSYENGAML-EPLSVALAGLQ-RAGVRLGDPVLICGAGPIGLITMLCAKAAGACPLVITDIDEGRLKF-AKEI-CPEVVT  229 (363)
T ss_dssp             CCHHHHHHH-HHHHHHHHHHH-HHTCCTTCCEEEECCSHHHHHHHHHHHHTTCCSEEEEESCHHHHHH-HHHH-CTTCEE
T ss_pred             CCHHHHHhh-hHHHHHHHHHH-HcCCCCCCEEEEECCCHHHHHHHHHHHHcCCCEEEEECCCHHHHHH-HHHh-chhccc
Confidence            999999977 57889999995 45589999999999999999999999999997 8888888776654 4777 654444


Q ss_pred             CC----C-HH---HHHHhcC--CccEEEEcCCCcccHHHHHhccccCCEEEEecCCCCCcccChHHHHhCCcEEEecccC
Q 018067          235 SR----D-QD---EMQAAMG--TMDGIIDTVSAVHPLMPLIGLLKSQGKLVLVGAPEKPLELPAFSLLMGRKIVGGSMIG  304 (361)
Q Consensus       235 ~~----~-~~---~~~~~~~--g~d~vid~~g~~~~~~~~~~~l~~~G~~v~~g~~~~~~~~~~~~~~~~~~~i~g~~~~  304 (361)
                      +.    + ++   .+.++++  ++|+|||++|++.++..++++++++|+++.+|.......++...++.+++++.|+...
T Consensus       230 ~~~~~~~~~~~~~~v~~~t~g~g~Dvvid~~g~~~~~~~~~~~l~~~G~iv~~G~~~~~~~~~~~~~~~~~~~i~g~~~~  309 (363)
T 3m6i_A          230 HKVERLSAEESAKKIVESFGGIEPAVALECTGVESSIAAAIWAVKFGGKVFVIGVGKNEIQIPFMRASVREVDLQFQYRY  309 (363)
T ss_dssp             EECCSCCHHHHHHHHHHHTSSCCCSEEEECSCCHHHHHHHHHHSCTTCEEEECCCCCSCCCCCHHHHHHHTCEEEECCSC
T ss_pred             ccccccchHHHHHHHHHHhCCCCCCEEEECCCChHHHHHHHHHhcCCCEEEEEccCCCCccccHHHHHhcCcEEEEccCC
Confidence            32    2 33   3444443  7999999999986689999999999999999987766778888889999999999876


Q ss_pred             CHHHHHHHHHHHHcCCCc--eeE-EEEecccHHHHHHHHHcC-CCceEEEEEeCC
Q 018067          305 GMKETQEMIDFAAKHNIR--ADI-EVIPADYVNTALERLAKA-DVRYRFVIDVAN  355 (361)
Q Consensus       305 ~~~~~~~~~~ll~~~~~~--~~~-~~~~l~~~~~a~~~~~~~-~~~gkvvi~~~~  355 (361)
                       .++++++++++++|+++  +.+ ++|||+++++||+.++++ ...+|+|++.++
T Consensus       310 -~~~~~~~~~l~~~g~i~~~~~i~~~~~l~~~~~A~~~~~~~~~~~~Kvvi~~~~  363 (363)
T 3m6i_A          310 -CNTWPRAIRLVENGLVDLTRLVTHRFPLEDALKAFETASDPKTGAIKVQIQSLE  363 (363)
T ss_dssp             -SSCHHHHHHHHHTTSSCCGGGEEEEEEGGGHHHHHHHHHCGGGCCSEEEEECC-
T ss_pred             -HHHHHHHHHHHHhCCCChHHceeeeeeHHHHHHHHHHHhccCCCeEEEEEecCC
Confidence             67899999999999985  445 899999999999999987 556999998864

>1vj0_A Alcohol dehydrogenase, zinc-containing; TM0436, structural G JCSG, PSI, protein structure initiative, joint center for S genomics; 2.00A {Thermotoga maritima} SCOP: b.35.1.2 c.2.1.1

Probab=100.00  E-value=9.5e-57  Score=423.33  Aligned_cols=338  Identities=22%  Similarity=0.320  Sum_probs=289.3

Q ss_pred             CCcccceeeeeecCCCCCccceeeccCCCCCCeEEEEEeeeccCcchHHhHhcCCCCCCCCCcccccccEEEEEeCCCCC
Q 018067            7 QEHPKNAFGWAAKDTSGVLSPFHFSRRATGEKDVTFKVTHCGICHSDLHMIKNEWGNTIYPIVPGHEIVGVVTEVGSKVS   86 (361)
Q Consensus         7 ~~~~~~~~~~~~~~~~~~l~~~~~~~p~~~~~evlV~v~~~~i~~~D~~~~~g~~~~~~~p~~lG~e~~G~Vv~vG~~v~   86 (361)
                      |...|+++.+..++  +.++++++|.|+|+++||||||+++|||++|++.+.|.++...+|.++|||++|+|+++| +|+
T Consensus        14 ~~~~mka~~~~~~g--~~l~~~~~~~P~~~~~eVlVkv~a~gi~~~D~~~~~G~~~~~~~P~v~GhE~~G~V~~vG-~V~   90 (380)
T 1vj0_A           14 MGLKAHAMVLEKFN--QPLVYKEFEISDIPRGSILVEILSAGVCGSDVHMFRGEDPRVPLPIILGHEGAGRVVEVN-GEK   90 (380)
T ss_dssp             CCEEEEEEEBCSTT--SCCEEEEEEECCCCTTCEEEEEEEEEECHHHHHHHTTCCTTCCSSBCCCCEEEEEEEEES-SCC
T ss_pred             hhhheEEEEEecCC--CCeEEEEccCCCCCCCEEEEEEeEEeecccchHHhcCCCCCCCCCcccCcCcEEEEEEeC-Ccc
Confidence            34577877765433  378899999999999999999999999999999999876545689999999999999999 999


Q ss_pred             ------CCCCCCEEEeccccCCCCCCcccc-cCCCCCCcchhcccccc---cCCCCcCCCcceeEEee-cCCceEECCCC
Q 018067           87 ------KFKVGDKVGVGCMVGSCRSCDSCA-IDLENYCPKVIMTYANK---YHDGTITYGGYSDIMVA-DEHFVVRIPEG  155 (361)
Q Consensus        87 ------~~~~GdrV~~~~~~~~c~~c~~c~-~~~~~~c~~~~~~~~~~---~~~~~~~~g~~a~~v~v-~~~~~~~ip~~  155 (361)
                            +|++||||++.+.. +||+|.+|. +|.+++|++..+.  +.   ........|+|+||+++ +++.++++|++
T Consensus        91 ~~~~~~~~~vGdrV~~~~~~-~cg~C~~C~~~g~~~~C~~~~~~--g~~~~~~~~~~~~G~~aey~~v~~~~~~~~iP~~  167 (380)
T 1vj0_A           91 RDLNGELLKPGDLIVWNRGI-TCGECYWCKVSKEPYLCPNRKVY--GINRGCSEYPHLRGCYSSHIVLDPETDVLKVSEK  167 (380)
T ss_dssp             BCTTSCBCCTTCEEEECSEE-CCSSSHHHHTSCCGGGCTTCEET--TTTCCSSSTTCCCSSSBSEEEECTTCCEEEECTT
T ss_pred             ccccCCCCCCCCEEEEcccC-CCCCCHHHhcCCCcccCCCccee--ccccccCCCCCCCccccceEEEcccceEEECCCC
Confidence                  99999999988766 899999999 9999999976321  10   00001347999999999 99999999999


Q ss_pred             CCcc-cccccchhhhhhhhHhhhcCC-CCCCCEEEEEcCChHHHHHHHHHHHcC-CeEEEEeCCchhHHHHHHHcCCCEE
Q 018067          156 TPLD-ATAPLLCAGITVYSPLRFYGL-DKPGMHVGVVGLGGLGHVAVKFAKAMG-VKVTVISTSPSKKSEAIERLGADSF  232 (361)
Q Consensus       156 ~~~~-~aa~l~~~~~ta~~~l~~~~~-~~~g~~vlV~Gag~vG~~a~~la~~~g-~~vi~~~~~~~~~~~~~~~~g~~~v  232 (361)
                      ++++ +|+.+. ++.|||+++.+ .+ +++|++|||+|+|++|++++|+|+.+| ++|+++++++++++.+ +++|++.+
T Consensus       168 l~~~~~Aa~~~-~~~ta~~al~~-~~~~~~g~~VlV~GaG~vG~~aiqlak~~Ga~~Vi~~~~~~~~~~~~-~~lGa~~v  244 (380)
T 1vj0_A          168 DDLDVLAMAMC-SGATAYHAFDE-YPESFAGKTVVIQGAGPLGLFGVVIARSLGAENVIVIAGSPNRLKLA-EEIGADLT  244 (380)
T ss_dssp             SCHHHHHHHTT-HHHHHHHHHHT-CSSCCBTCEEEEECCSHHHHHHHHHHHHTTBSEEEEEESCHHHHHHH-HHTTCSEE
T ss_pred             CChHHhHhhhc-HHHHHHHHHHh-cCCCCCCCEEEEECcCHHHHHHHHHHHHcCCceEEEEcCCHHHHHHH-HHcCCcEE
Confidence            9999 666555 89999999965 56 899999999999999999999999999 4999999888776555 78999999


Q ss_pred             ecCC---CHH---HHHHhcC--CccEEEEcCCCcccHHHHHhccccCCEEEEecCCC-C-CcccChHH-HHhCCcEEEec
Q 018067          233 LVSR---DQD---EMQAAMG--TMDGIIDTVSAVHPLMPLIGLLKSQGKLVLVGAPE-K-PLELPAFS-LLMGRKIVGGS  301 (361)
Q Consensus       233 v~~~---~~~---~~~~~~~--g~d~vid~~g~~~~~~~~~~~l~~~G~~v~~g~~~-~-~~~~~~~~-~~~~~~~i~g~  301 (361)
                      ++++   +.+   .+.++++  ++|+|||++|.+..+..++++++++|+++.+|... + ...++... ++.+++++.|+
T Consensus       245 i~~~~~~~~~~~~~v~~~~~g~g~Dvvid~~g~~~~~~~~~~~l~~~G~iv~~G~~~~~~~~~~~~~~~~~~~~~~i~g~  324 (380)
T 1vj0_A          245 LNRRETSVEERRKAIMDITHGRGADFILEATGDSRALLEGSELLRRGGFYSVAGVAVPQDPVPFKVYEWLVLKNATFKGI  324 (380)
T ss_dssp             EETTTSCHHHHHHHHHHHTTTSCEEEEEECSSCTTHHHHHHHHEEEEEEEEECCCCSCCCCEEECHHHHTTTTTCEEEEC
T ss_pred             EeccccCcchHHHHHHHHhCCCCCcEEEECCCCHHHHHHHHHHHhcCCEEEEEecCCCCCCeeEchHHHHHhCCeEEEEe
Confidence            9987   544   3444443  79999999998766999999999999999999876 4 56777777 88899999999


Q ss_pred             ccCCHHHHHHHHHHHHc--CCCceeE-EEEecccHHHHHHHHHcCCCceEEEEEeC
Q 018067          302 MIGGMKETQEMIDFAAK--HNIRADI-EVIPADYVNTALERLAKADVRYRFVIDVA  354 (361)
Q Consensus       302 ~~~~~~~~~~~~~ll~~--~~~~~~~-~~~~l~~~~~a~~~~~~~~~~gkvvi~~~  354 (361)
                      +..+.++++++++++++  |++++.+ ++|+|+++++||+.+++++.. |+|+.++
T Consensus       325 ~~~~~~~~~~~~~l~~~~~g~l~~~i~~~~~l~~~~~A~~~~~~~~~~-Kvvl~~~  379 (380)
T 1vj0_A          325 WVSDTSHFVKTVSITSRNYQLLSKLITHRLPLKEANKALELMESREAL-KVILYPE  379 (380)
T ss_dssp             CCCCHHHHHHHHHHHHTCHHHHGGGCCEEEEGGGHHHHHHHHHHTSCS-CEEEECC
T ss_pred             ecCCHHHHHHHHHHHHhhcCCeeeEEEEEEeHHHHHHHHHHHhcCCCc-eEEEEeC
Confidence            98888999999999999  9998776 899999999999999998888 9999875

>3fpc_A NADP-dependent alcohol dehydrogenase; oxydoreductase, bacterial alcohol dehydrogenase, domain exchange, chimera, metal-binding; 1.40A {Thermoanaerobacter brockii} PDB: 2nvb_A* 1ykf_A* 1bxz_A* 3ftn_A 3fsr_A 1y9a_A* 2oui_A* 3fpl_A* 1jqb_A 1kev_A* 1ped_A 2b83_A

Probab=100.00  E-value=1.1e-55  Score=412.32  Aligned_cols=333  Identities=20%  Similarity=0.300  Sum_probs=281.2

Q ss_pred             cceeeeeecCCCCCccceeeccCCCCCCeEEEEEeeeccCcchHH-hHhcCCCCCCCCCcccccccEEEEEeCCCCCCCC
Q 018067           11 KNAFGWAAKDTSGVLSPFHFSRRATGEKDVTFKVTHCGICHSDLH-MIKNEWGNTIYPIVPGHEIVGVVTEVGSKVSKFK   89 (361)
Q Consensus        11 ~~~~~~~~~~~~~~l~~~~~~~p~~~~~evlV~v~~~~i~~~D~~-~~~g~~~~~~~p~~lG~e~~G~Vv~vG~~v~~~~   89 (361)
                      ||++.+..   ++.++++++|.|+|+++||||||++++||++|++ .+.|..+ ..+|.++|||++|+|+++|++|++|+
T Consensus         1 MkA~~~~~---~~~~~~~e~~~P~~~~~eVlVkv~a~gi~~~D~~~~~~g~~~-~~~p~v~G~E~~G~V~~vG~~v~~~~   76 (352)
T 3fpc_A            1 MKGFAMLS---IGKVGWIEKEKPAPGPFDAIVRPLAVAPCTSDIHTVFEGAIG-ERHNMILGHEAVGEVVEVGSEVKDFK   76 (352)
T ss_dssp             CEEEEEEE---TTEEEEEECCCCCCCTTCEEEEEEEEECCHHHHHHHHSCTTC-CCSSEECCCEEEEEEEEECTTCCSCC
T ss_pred             CeEEEEcc---CCCceEEeCCCCCCCCCeEEEEeCEEeEcccchHHHhCCCCC-CCCCcccCCcceEEEEEECCCCCcCC
Confidence            67777654   4558889999999999999999999999999999 5577665 36799999999999999999999999


Q ss_pred             CCCEEEeccccCCCCCCcccccCCCCCCcchhcccccccCCCCcCCCcceeEEeecCC--ceEECCCCCCcccccccchh
Q 018067           90 VGDKVGVGCMVGSCRSCDSCAIDLENYCPKVIMTYANKYHDGTITYGGYSDIMVADEH--FVVRIPEGTPLDATAPLLCA  167 (361)
Q Consensus        90 ~GdrV~~~~~~~~c~~c~~c~~~~~~~c~~~~~~~~~~~~~~~~~~g~~a~~v~v~~~--~~~~ip~~~~~~~aa~l~~~  167 (361)
                      +||||++.+.. +|+.|.+|..|.+++|.+....    +..+...+|+|+||+.++++  .++++|+++++++|+.++++
T Consensus        77 vGdrV~~~~~~-~c~~c~~c~~g~~~~~~~~~~~----~~~~~~~~G~~aey~~v~~~~~~~~~iP~~~~~~~aa~~~~~  151 (352)
T 3fpc_A           77 PGDRVVVPAIT-PDWRTSEVQRGYHQHSGGMLAG----WKFSNVKDGVFGEFFHVNDADMNLAHLPKEIPLEAAVMIPDM  151 (352)
T ss_dssp             TTCEEEECSBC-CCSSSHHHHTTCGGGTTSTTTT----BCBTTTBCCSSBSCEEESSHHHHCEECCTTSCHHHHTTTTTH
T ss_pred             CCCEEEEcccc-CCCCchhhcCCCcCCccccccc----cccccCCCCcccceEEeccccCeEEECCCCCCHHHHhhccch
Confidence            99999887765 8999999999999999764321    12244578999999999976  89999999999999999999


Q ss_pred             hhhhhhHhhhcCCCCCCCEEEEEcCChHHHHHHHHHHHcCC-eEEEEeCCchhHHHHHHHcCCCEEecCCCHH---HHHH
Q 018067          168 GITVYSPLRFYGLDKPGMHVGVVGLGGLGHVAVKFAKAMGV-KVTVISTSPSKKSEAIERLGADSFLVSRDQD---EMQA  243 (361)
Q Consensus       168 ~~ta~~~l~~~~~~~~g~~vlV~Gag~vG~~a~~la~~~g~-~vi~~~~~~~~~~~~~~~~g~~~vv~~~~~~---~~~~  243 (361)
                      +.|||++++ ..++++|++|||+|+|++|++++|+|+.+|+ +|++++++++++ ++++++|+++++++++++   .+.+
T Consensus       152 ~~ta~~al~-~~~~~~g~~VlV~GaG~vG~~a~qla~~~Ga~~Vi~~~~~~~~~-~~~~~lGa~~vi~~~~~~~~~~v~~  229 (352)
T 3fpc_A          152 MTTGFHGAE-LANIKLGDTVCVIGIGPVGLMSVAGANHLGAGRIFAVGSRKHCC-DIALEYGATDIINYKNGDIVEQILK  229 (352)
T ss_dssp             HHHHHHHHH-HTTCCTTCCEEEECCSHHHHHHHHHHHTTTCSSEEEECCCHHHH-HHHHHHTCCEEECGGGSCHHHHHHH
T ss_pred             hHHHHHHHH-hcCCCCCCEEEEECCCHHHHHHHHHHHHcCCcEEEEECCCHHHH-HHHHHhCCceEEcCCCcCHHHHHHH
Confidence            999999995 4568999999999999999999999999999 798888777665 555899999999987654   4445


Q ss_pred             hcC--CccEEEEcCCCcccHHHHHhccccCCEEEEecCCCCC--cccChH--HHHhCCcEEEecccCC-HHHHHHHHHHH
Q 018067          244 AMG--TMDGIIDTVSAVHPLMPLIGLLKSQGKLVLVGAPEKP--LELPAF--SLLMGRKIVGGSMIGG-MKETQEMIDFA  316 (361)
Q Consensus       244 ~~~--g~d~vid~~g~~~~~~~~~~~l~~~G~~v~~g~~~~~--~~~~~~--~~~~~~~~i~g~~~~~-~~~~~~~~~ll  316 (361)
                      +++  ++|+|||++|++.++..++++++++|+++.+|.....  +.++..  .+..+++++.++.... .++++++++++
T Consensus       230 ~t~g~g~D~v~d~~g~~~~~~~~~~~l~~~G~~v~~G~~~~~~~~~~~~~~~~~~~~~~~i~g~~~~~~~~~~~~~~~l~  309 (352)
T 3fpc_A          230 ATDGKGVDKVVIAGGDVHTFAQAVKMIKPGSDIGNVNYLGEGDNIDIPRSEWGVGMGHKHIHGGLCPGGRLRMERLIDLV  309 (352)
T ss_dssp             HTTTCCEEEEEECSSCTTHHHHHHHHEEEEEEEEECCCCCSCSEEEEETTTTGGGTBCEEEEEBCCCCHHHHHHHHHHHH
T ss_pred             HcCCCCCCEEEECCCChHHHHHHHHHHhcCCEEEEecccCCCCceecchhHhhhhccccEEEEeeccCchhHHHHHHHHH
Confidence            554  6999999999976699999999999999999986543  233322  2345889999987643 67899999999


Q ss_pred             HcCCCcee--E-EEEe-cccHHHHHHHHHcCCCc-eEEEEEeC
Q 018067          317 AKHNIRAD--I-EVIP-ADYVNTALERLAKADVR-YRFVIDVA  354 (361)
Q Consensus       317 ~~~~~~~~--~-~~~~-l~~~~~a~~~~~~~~~~-gkvvi~~~  354 (361)
                      ++|++++.  + ++|+ |+++++||+.+++++.. +|+|++++
T Consensus       310 ~~g~i~~~~~i~~~~~gl~~~~~A~~~~~~~~~~~~Kvvi~~~  352 (352)
T 3fpc_A          310 FYKRVDPSKLVTHVFRGFDNIEKAFMLMKDKPKDLIKPVVILA  352 (352)
T ss_dssp             HTTSCCGGGGEEEEEESTTHHHHHHHHHHSCCTTCSEEEEECC
T ss_pred             HcCCCChhHhheeeCCCHHHHHHHHHHHHhCCCCcEEEEEEeC
Confidence            99999874  4 8999 99999999999987655 89999874

>3ip1_A Alcohol dehydrogenase, zinc-containing; structural genomics, metal-binding, oxidoreductase, PSI-2, protein structure initiative; 2.09A {Thermotoga maritima}

Probab=100.00  E-value=1.9e-55  Score=417.72  Aligned_cols=321  Identities=20%  Similarity=0.327  Sum_probs=276.6

Q ss_pred             CccceeeccCC-CCCCeEEEEEeeeccCcchHHhHhcCCC-------CCCCCCcccccccEEEEEeCCCC------CCCC
Q 018067           24 VLSPFHFSRRA-TGEKDVTFKVTHCGICHSDLHMIKNEWG-------NTIYPIVPGHEIVGVVTEVGSKV------SKFK   89 (361)
Q Consensus        24 ~l~~~~~~~p~-~~~~evlV~v~~~~i~~~D~~~~~g~~~-------~~~~p~~lG~e~~G~Vv~vG~~v------~~~~   89 (361)
                      .++++++|.|+ |+++||||||+++|||++|++.++|...       ...+|.++|||++|+|+++|++|      ++|+
T Consensus        41 ~l~~~~~~~P~~~~~~eVlVkv~a~gi~~~D~~~~~g~~~~~~~~~~~~~~P~i~G~E~~G~V~~vG~~v~~~~~~~~~~  120 (404)
T 3ip1_A           41 EVRVEEVPEPRIEKPTEIIIKVKACGICGSDVHMAQTDEEGYILYPGLTGFPVTLGHEFSGVVVEAGPEAINRRTNKRFE  120 (404)
T ss_dssp             EEEEEEECCCCCCSTTEEEEEEEEEECCHHHHHHHCBCTTSBBSCCSCBCSSEECCCEEEEEEEEECTTCEETTTTEECC
T ss_pred             ceEEEEcCCCCCCCcCEEEEEEeEeeeCHHHHHHhcCCCCccccccccCCCCcccCccceEEEEEECCCccccccCCCCC
Confidence            68889999999 9999999999999999999999886421       23678999999999999999999      8999


Q ss_pred             CCCEEEeccccCCCCCCcccccCCCCCCcchhcccccccCCCCcCCCcceeEEeecCCceEECCCCCCc------ccccc
Q 018067           90 VGDKVGVGCMVGSCRSCDSCAIDLENYCPKVIMTYANKYHDGTITYGGYSDIMVADEHFVVRIPEGTPL------DATAP  163 (361)
Q Consensus        90 ~GdrV~~~~~~~~c~~c~~c~~~~~~~c~~~~~~~~~~~~~~~~~~g~~a~~v~v~~~~~~~ip~~~~~------~~aa~  163 (361)
                      +||||++.+.. +||+|.+|.+|.++.|.+....       |....|+|+||+.++++.++++|+++++      .++|+
T Consensus       121 vGdrV~~~~~~-~Cg~C~~C~~g~~~~C~~~~~~-------g~~~~G~~aey~~v~~~~~~~iP~~~~~~~~~~~~~aa~  192 (404)
T 3ip1_A          121 IGEPVCAEEML-WCGHCRPCAEGFPNHCENLNEL-------GFNVDGAFAEYVKVDAKYAWSLRELEGVYEGDRLFLAGS  192 (404)
T ss_dssp             TTCEEEECSEE-CCSCSHHHHTTCGGGCTTCEEB-------TTTBCCSSBSEEEEEGGGEEECGGGBTTBCTHHHHHHHH
T ss_pred             CCCEEEECCcc-CCCCCHHHHCcCcccCcccccc-------CCCCCCCCcceEEechHHeEeccccccccccccchhHHh
Confidence            99999988775 8999999999999999986432       4457899999999999999999998864      45888


Q ss_pred             cchhhhhhhhHhhhc-CCCCCCCEEEEEcCChHHHHHHHHHHHcCC-eEEEEeCCchhHHHHHHHcCCCEEecCCCHH--
Q 018067          164 LLCAGITVYSPLRFY-GLDKPGMHVGVVGLGGLGHVAVKFAKAMGV-KVTVISTSPSKKSEAIERLGADSFLVSRDQD--  239 (361)
Q Consensus       164 l~~~~~ta~~~l~~~-~~~~~g~~vlV~Gag~vG~~a~~la~~~g~-~vi~~~~~~~~~~~~~~~~g~~~vv~~~~~~--  239 (361)
                      +++++.|||+++... +++++|++|||+|+|++|++++|+|+.+|+ +|++++.+++++ ++++++|+++++++++++  
T Consensus       193 l~~~~~ta~~al~~~~~~~~~g~~VlV~GaG~vG~~aiqlak~~Ga~~Vi~~~~~~~~~-~~~~~lGa~~vi~~~~~~~~  271 (404)
T 3ip1_A          193 LVEPTSVAYNAVIVRGGGIRPGDNVVILGGGPIGLAAVAILKHAGASKVILSEPSEVRR-NLAKELGADHVIDPTKENFV  271 (404)
T ss_dssp             THHHHHHHHHHHTTTSCCCCTTCEEEEECCSHHHHHHHHHHHHTTCSEEEEECSCHHHH-HHHHHHTCSEEECTTTSCHH
T ss_pred             hhhHHHHHHHHHHHhccCCCCCCEEEEECCCHHHHHHHHHHHHcCCCEEEEECCCHHHH-HHHHHcCCCEEEcCCCCCHH
Confidence            999999999999754 478999999999999999999999999999 888888777665 555899999999987754  


Q ss_pred             -HHHHhcC--CccEEEEcCCCc-ccHHHHHhcc----ccCCEEEEecCCCCCcccChHHHHhCCcEEEecccCC-HHHHH
Q 018067          240 -EMQAAMG--TMDGIIDTVSAV-HPLMPLIGLL----KSQGKLVLVGAPEKPLELPAFSLLMGRKIVGGSMIGG-MKETQ  310 (361)
Q Consensus       240 -~~~~~~~--g~d~vid~~g~~-~~~~~~~~~l----~~~G~~v~~g~~~~~~~~~~~~~~~~~~~i~g~~~~~-~~~~~  310 (361)
                       .+.++++  ++|+|||++|++ ..+..+++++    +++|+++.+|.......++...++.+++++.|+.... .++++
T Consensus       272 ~~i~~~t~g~g~D~vid~~g~~~~~~~~~~~~l~~~~~~~G~iv~~G~~~~~~~~~~~~~~~~~~~i~g~~~~~~~~~~~  351 (404)
T 3ip1_A          272 EAVLDYTNGLGAKLFLEATGVPQLVWPQIEEVIWRARGINATVAIVARADAKIPLTGEVFQVRRAQIVGSQGHSGHGTFP  351 (404)
T ss_dssp             HHHHHHTTTCCCSEEEECSSCHHHHHHHHHHHHHHCSCCCCEEEECSCCCSCEEECHHHHHHTTCEEEECCCCCSTTHHH
T ss_pred             HHHHHHhCCCCCCEEEECCCCcHHHHHHHHHHHHhccCCCcEEEEeCCCCCCCcccHHHHhccceEEEEecCCCchHHHH
Confidence             4445554  699999999998 2366677777    9999999999987777888888999999999998654 57899


Q ss_pred             HHHHHHHcCCCce--eE-EEEecccHHHHHHHHHcCCCceEEEEEeCCccc
Q 018067          311 EMIDFAAKHNIRA--DI-EVIPADYVNTALERLAKADVRYRFVIDVANTMK  358 (361)
Q Consensus       311 ~~~~ll~~~~~~~--~~-~~~~l~~~~~a~~~~~~~~~~gkvvi~~~~~~~  358 (361)
                      ++++++++| +++  .+ ++|+|+++++||+.+.    .||+|++++++.+
T Consensus       352 ~~~~ll~~g-l~~~~~i~~~~~l~~~~~A~~~~~----~GKvvl~~~~~~~  397 (404)
T 3ip1_A          352 RVISLMASG-MDMTKIISKTVSMEEIPEYIKRLQ----TDKSLVKVTMLNE  397 (404)
T ss_dssp             HHHHHHHTT-CCGGGGCCEEECGGGHHHHHHHTT----TCTTCSCEEEECC
T ss_pred             HHHHHHHcC-CChhheEEEEeeHHHHHHHHHHHh----CCcEEEecCCCCC
Confidence            999999999 764  34 8999999999999887    4788888876543

>2dph_A Formaldehyde dismutase; dismutation of aldehydes, oxidoreductase; HET: NAD; 2.27A {Pseudomonas putida}

Probab=100.00  E-value=8.5e-55  Score=412.60  Aligned_cols=337  Identities=20%  Similarity=0.245  Sum_probs=283.7

Q ss_pred             ccceeeeeecCCCCCccceeeccCCC-CC-----CeEEEEEeeeccCcchHHhHhcCCCCCCCCCcccccccEEEEEeCC
Q 018067           10 PKNAFGWAAKDTSGVLSPFHFSRRAT-GE-----KDVTFKVTHCGICHSDLHMIKNEWGNTIYPIVPGHEIVGVVTEVGS   83 (361)
Q Consensus        10 ~~~~~~~~~~~~~~~l~~~~~~~p~~-~~-----~evlV~v~~~~i~~~D~~~~~g~~~~~~~p~~lG~e~~G~Vv~vG~   83 (361)
                      +|+++.+..   ++.++++++|.|+| ++     +||||||+++|||++|++.++|..+ ..+|.++|||++|+|+++|+
T Consensus         2 ~MkA~~~~~---~~~l~~~~~p~P~~~~~~~~~~~eVlVkv~a~gic~~D~~~~~G~~~-~~~p~v~GhE~~G~V~~vG~   77 (398)
T 2dph_A            2 GNKSVVYHG---TRDLRVETVPYPKLEHNNRKLEHAVILKVVSTNICGSDQHIYRGRFI-VPKGHVLGHEITGEVVEKGS   77 (398)
T ss_dssp             CEEEEEEEE---TTEEEEEEECCCCSEETTEECTTCEEEEEEEEECCHHHHHHHTTSSC-CCTTCBCCCCEEEEEEEECT
T ss_pred             ccEEEEEEc---CCCEEEEEccCCCCCCCcCCCCCeEEEEEEEEeecHHHHHHhcCCCC-CCCCcccCCceEEEEEEECC
Confidence            578777654   46788999999987 68     9999999999999999999998643 36789999999999999999


Q ss_pred             CCCCCCCCCEEEeccccCCCCCCcccccCCCCCCcchhcc--cccccCCC---CcCCCcceeEEeecCC--ceEECCCCC
Q 018067           84 KVSKFKVGDKVGVGCMVGSCRSCDSCAIDLENYCPKVIMT--YANKYHDG---TITYGGYSDIMVADEH--FVVRIPEGT  156 (361)
Q Consensus        84 ~v~~~~~GdrV~~~~~~~~c~~c~~c~~~~~~~c~~~~~~--~~~~~~~~---~~~~g~~a~~v~v~~~--~~~~ip~~~  156 (361)
                      +|++|++||||++.+.. +||.|.+|++|.+++|.+....  ..+ ...|   ....|+|+||++++.+  .++++|+++
T Consensus        78 ~v~~~~vGDrV~~~~~~-~Cg~C~~C~~g~~~~C~~~~~~~~~~~-~~~G~~~~~~~G~~aey~~v~~~~~~~~~iP~~~  155 (398)
T 2dph_A           78 DVELMDIGDLVSVPFNV-ACGRCRNCKEARSDVCENNLVNPDADL-GAFGFDLKGWSGGQAEYVLVPYADYMLLKFGDKE  155 (398)
T ss_dssp             TCCSCCTTCEEECCSBC-CCSCSHHHHTTCGGGCCCTTTCSSSSC-CBTTTTBSSCCCSSBSEEEESSHHHHCEECSSHH
T ss_pred             CCCCCCCCCEEEEcCCC-CCCCChhhhCcCcccCCCccccccccc-cccccccCCCCceeeeeEEeccccCeEEECCCCC
Confidence            99999999999887655 8999999999999999972110  000 0011   1357999999999987  899999999


Q ss_pred             Cccc----ccccchhhhhhhhHhhhcCCCCCCCEEEEEcCChHHHHHHHHHHHcCC-eEEEEeCCchhHHHHHHHcCCCE
Q 018067          157 PLDA----TAPLLCAGITVYSPLRFYGLDKPGMHVGVVGLGGLGHVAVKFAKAMGV-KVTVISTSPSKKSEAIERLGADS  231 (361)
Q Consensus       157 ~~~~----aa~l~~~~~ta~~~l~~~~~~~~g~~vlV~Gag~vG~~a~~la~~~g~-~vi~~~~~~~~~~~~~~~~g~~~  231 (361)
                      ++++    ||++++++.|||++++ .+++++|++|||+|+|++|++++|+|+.+|+ +|+++++++++++. ++++|++ 
T Consensus       156 ~~~~~~~~aa~l~~~~~ta~~al~-~~~~~~g~~VlV~GaG~vG~~aiqlak~~Ga~~Vi~~~~~~~~~~~-a~~lGa~-  232 (398)
T 2dph_A          156 QAMEKIKDLTLISDILPTGFHGCV-SAGVKPGSHVYIAGAGPVGRCAAAGARLLGAACVIVGDQNPERLKL-LSDAGFE-  232 (398)
T ss_dssp             HHHHTHHHHTTTTTHHHHHHHHHH-HTTCCTTCEEEEECCSHHHHHHHHHHHHHTCSEEEEEESCHHHHHH-HHTTTCE-
T ss_pred             ChhhhcchhhhhcCHHHHHHHHHH-HcCCCCCCEEEEECCCHHHHHHHHHHHHcCCCEEEEEcCCHHHHHH-HHHcCCc-
Confidence            9998    8999999999999995 5678999999999999999999999999999 99999988877654 4889996 


Q ss_pred             EecCCCHH----HHHHhcC--CccEEEEcCCCcc--------------cHHHHHhccccCCEEEEecCCC----------
Q 018067          232 FLVSRDQD----EMQAAMG--TMDGIIDTVSAVH--------------PLMPLIGLLKSQGKLVLVGAPE----------  281 (361)
Q Consensus       232 vv~~~~~~----~~~~~~~--g~d~vid~~g~~~--------------~~~~~~~~l~~~G~~v~~g~~~----------  281 (361)
                      ++++++.+    .+.++++  ++|+|||++|+..              ++..++++++++|+++.+|...          
T Consensus       233 ~i~~~~~~~~~~~~~~~~~g~g~Dvvid~~g~~~~~~~~~~~~~~~~~~~~~~~~~l~~gG~iv~~G~~~~~~~~~~~~~  312 (398)
T 2dph_A          233 TIDLRNSAPLRDQIDQILGKPEVDCGVDAVGFEAHGLGDEANTETPNGALNSLFDVVRAGGAIGIPGIYVGSDPDPVNKD  312 (398)
T ss_dssp             EEETTSSSCHHHHHHHHHSSSCEEEEEECSCTTCBCSGGGTTSBCTTHHHHHHHHHEEEEEEEECCSCCCSCCSSCSSHH
T ss_pred             EEcCCCcchHHHHHHHHhCCCCCCEEEECCCCccccccccccccccHHHHHHHHHHHhcCCEEEEecccccccccccccc
Confidence            78876533    3445554  7999999999863              4889999999999999999762          


Q ss_pred             ---CCcccChHHHHhCCcEEEecccCCHHHHHHHHHHHHcCCCc--e--eE-EEEecccHHHHHHHHHcCCCceEEEEEe
Q 018067          282 ---KPLELPAFSLLMGRKIVGGSMIGGMKETQEMIDFAAKHNIR--A--DI-EVIPADYVNTALERLAKADVRYRFVIDV  353 (361)
Q Consensus       282 ---~~~~~~~~~~~~~~~~i~g~~~~~~~~~~~~~~ll~~~~~~--~--~~-~~~~l~~~~~a~~~~~~~~~~gkvvi~~  353 (361)
                         ....++...++.|++++.|+.....++++++++++++|+++  +  .+ ++|+|+++++||+.+.+++. ||+|+.+
T Consensus       313 ~~~~~~~~~~~~~~~k~~~i~g~~~~~~~~~~~~~~l~~~g~l~~~~~~~i~~~~~l~~~~~A~~~~~~~~~-gKvvv~~  391 (398)
T 2dph_A          313 AGSGRLHLDFGKMWTKSIRIMTGMAPVTNYNRHLTEAILWDQMPYLSKVMNIEVITLDQAPDGYAKFDKGSP-AKFVIDP  391 (398)
T ss_dssp             HHTTEEEEEHHHHHHTTCEEECSSCCGGGTHHHHHHHHHTTCCHHHHHHHCEEEECSTTHHHHHHHHHTTCS-CEEEECT
T ss_pred             ccCCcccccHHHHhhcCCEEEEeccCcHHHHHHHHHHHHcCCCCccchhhEEEEEcHHHHHHHHHHHhcCCc-eEEEEec
Confidence               23456666778899999998877777899999999999999  6  34 89999999999999999987 9999998


Q ss_pred             CCc
Q 018067          354 ANT  356 (361)
Q Consensus       354 ~~~  356 (361)
                      +..
T Consensus       392 ~~~  394 (398)
T 2dph_A          392 HGM  394 (398)
T ss_dssp             TSC
T ss_pred             Ccc
Confidence            654

>1kol_A Formaldehyde dehydrogenase; oxidoreductase; HET: NAD; 1.65A {Pseudomonas putida} SCOP: b.35.1.2 c.2.1.1

Probab=100.00  E-value=2.2e-54  Score=410.03  Aligned_cols=339  Identities=22%  Similarity=0.246  Sum_probs=281.7

Q ss_pred             ccceeeeeecCCCCCccceeeccCCCC-CCe------EEEEEeeeccCcchHHhHhcCCCCCCCCCcccccccEEEEEeC
Q 018067           10 PKNAFGWAAKDTSGVLSPFHFSRRATG-EKD------VTFKVTHCGICHSDLHMIKNEWGNTIYPIVPGHEIVGVVTEVG   82 (361)
Q Consensus        10 ~~~~~~~~~~~~~~~l~~~~~~~p~~~-~~e------vlV~v~~~~i~~~D~~~~~g~~~~~~~p~~lG~e~~G~Vv~vG   82 (361)
                      +|+++.+..   ++.++++++|.|+|+ ++|      |||||+++|||++|++.++|.++ ..+|.++|||++|+|+++|
T Consensus         2 ~Mka~~~~~---~~~l~~~~~p~P~~~~~~e~~~~~eVlVkv~a~gi~~~D~~~~~g~~~-~~~p~v~GhE~~G~V~~vG   77 (398)
T 1kol_A            2 GNRGVVYLG---SGKVEVQKIDYPKMQDPRGKKIEHGVILKVVSTNICGSDQHMVRGRTT-AQVGLVLGHEITGEVIEKG   77 (398)
T ss_dssp             CEEEEEEEE---TTEEEEEEECCCCSBCTTSCBCSSCEEEEEEEEECCHHHHHHHTTCSC-CCTTCBCCCCEEEEEEEEC
T ss_pred             ccEEEEEec---CCceEEEEecCCCCCCCCcccccceEEEEEEEEeechhhHHHHcCCCC-CCCCcccCcccEEEEEEEC
Confidence            578777653   457888999999997 898      99999999999999999998654 3578999999999999999


Q ss_pred             CCCCCCCCCCEEEeccccCCCCCCcccccCCCCCCcchhcccccccCCC----CcCCCcceeEEeecCC--ceEECCCCC
Q 018067           83 SKVSKFKVGDKVGVGCMVGSCRSCDSCAIDLENYCPKVIMTYANKYHDG----TITYGGYSDIMVADEH--FVVRIPEGT  156 (361)
Q Consensus        83 ~~v~~~~~GdrV~~~~~~~~c~~c~~c~~~~~~~c~~~~~~~~~~~~~~----~~~~g~~a~~v~v~~~--~~~~ip~~~  156 (361)
                      ++|++|++||||++.+. .+||+|.+|++|.+++|++......+. ..|    ....|+|+||++++.+  +++++|+++
T Consensus        78 ~~v~~~~vGDrV~~~~~-~~cg~C~~C~~g~~~~C~~~~~~~~~~-~~g~~~~~~~~G~~aey~~v~~~~~~~~~~P~~~  155 (398)
T 1kol_A           78 RDVENLQIGDLVSVPFN-VACGRCRSCKEMHTGVCLTVNPARAGG-AYGYVDMGDWTGGQAEYVLVPYADFNLLKLPDRD  155 (398)
T ss_dssp             TTCCSCCTTCEEECCSE-ECCSSSHHHHTTCGGGCSSSCSSSSCE-EBTCTTSCCBCCCSBSEEEESSHHHHCEECSCHH
T ss_pred             CCCCcCCCCCEEEECCc-CCCCCChHHhCcCcccCCCcccccccc-eeeeccCCCCCceeeeEEEecchhCeEEECCCCc
Confidence            99999999999987665 489999999999999999863211000 001    1346999999999986  899999999


Q ss_pred             Cccc----ccccchhhhhhhhHhhhcCCCCCCCEEEEEcCChHHHHHHHHHHHcCC-eEEEEeCCchhHHHHHHHcCCCE
Q 018067          157 PLDA----TAPLLCAGITVYSPLRFYGLDKPGMHVGVVGLGGLGHVAVKFAKAMGV-KVTVISTSPSKKSEAIERLGADS  231 (361)
Q Consensus       157 ~~~~----aa~l~~~~~ta~~~l~~~~~~~~g~~vlV~Gag~vG~~a~~la~~~g~-~vi~~~~~~~~~~~~~~~~g~~~  231 (361)
                      ++++    ++++++++.|||++++ ..++++|++|||+|+|++|++++|+|+.+|+ +|+++++++++++ +++++|++ 
T Consensus       156 ~~~~~~~~aa~l~~~~~ta~~al~-~~~~~~g~~VlV~GaG~vG~~aiqlAk~~Ga~~Vi~~~~~~~~~~-~a~~lGa~-  232 (398)
T 1kol_A          156 KAMEKIRDLTCLSDILPTGYHGAV-TAGVGPGSTVYVAGAGPVGLAAAASARLLGAAVVIVGDLNPARLA-HAKAQGFE-  232 (398)
T ss_dssp             HHHHTHHHHGGGGTHHHHHHHHHH-HTTCCTTCEEEEECCSHHHHHHHHHHHHTTCSEEEEEESCHHHHH-HHHHTTCE-
T ss_pred             chhhhcccccccccHHHHHHHHHH-HcCCCCCCEEEEECCcHHHHHHHHHHHHCCCCeEEEEcCCHHHHH-HHHHcCCc-
Confidence            9988    7889999999999997 4668999999999999999999999999999 6888888777655 44899997 


Q ss_pred             EecCCCH----HHHHHhcC--CccEEEEcCCCcc---------------cHHHHHhccccCCEEEEecCC-CC-------
Q 018067          232 FLVSRDQ----DEMQAAMG--TMDGIIDTVSAVH---------------PLMPLIGLLKSQGKLVLVGAP-EK-------  282 (361)
Q Consensus       232 vv~~~~~----~~~~~~~~--g~d~vid~~g~~~---------------~~~~~~~~l~~~G~~v~~g~~-~~-------  282 (361)
                      ++++++.    +.+.++++  ++|+|||++|+..               ++..++++++++|+++.+|.. .+       
T Consensus       233 ~i~~~~~~~~~~~v~~~t~g~g~Dvvid~~G~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~G~iv~~G~~~~~~~~~~~~  312 (398)
T 1kol_A          233 IADLSLDTPLHEQIAALLGEPEVDCAVDAVGFEARGHGHEGAKHEAPATVLNSLMQVTRVAGKIGIPGLYVTEDPGAVDA  312 (398)
T ss_dssp             EEETTSSSCHHHHHHHHHSSSCEEEEEECCCTTCBCSSTTGGGSBCTTHHHHHHHHHEEEEEEEEECSCCCSCCTTCSSH
T ss_pred             EEccCCcchHHHHHHHHhCCCCCCEEEECCCCcccccccccccccchHHHHHHHHHHHhcCCEEEEeccccCCccccccc
Confidence            6777643    34555554  7999999999862               488999999999999999975 11       


Q ss_pred             -----CcccChHHHHhCCcEEEecccCCHHHHHHHHHHHHcCCCc---eeE-EEEecccHHHHHHHHHcCCCceEEEEEe
Q 018067          283 -----PLELPAFSLLMGRKIVGGSMIGGMKETQEMIDFAAKHNIR---ADI-EVIPADYVNTALERLAKADVRYRFVIDV  353 (361)
Q Consensus       283 -----~~~~~~~~~~~~~~~i~g~~~~~~~~~~~~~~ll~~~~~~---~~~-~~~~l~~~~~a~~~~~~~~~~gkvvi~~  353 (361)
                           ...++...++.+++++.++.....++++++++++.+|+++   +.+ ++|+|+++++||+.+.+++. ||+|+.+
T Consensus       313 ~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~l~~~g~l~~~~~~i~~~~~l~~~~~A~~~~~~~~~-gKvvi~~  391 (398)
T 1kol_A          313 AAKIGSLSIRFGLGWAKSHSFHTGQTPVMKYNRALMQAIMWDRINIAEVVGVQVISLDDAPRGYGEFDAGVP-KKFVIDP  391 (398)
T ss_dssp             HHHTTCCCCCHHHHHHTTCEEEESSCCHHHHHHHHHHHHHTTSCCHHHHHTEEEECGGGHHHHHHHHHHTCS-CEEEECT
T ss_pred             ccccccccccHHHHhhcccEEEecccChHHHHHHHHHHHHcCCCCCccceeEEEEcHHHHHHHHHHHhCCCc-eEEEEEe
Confidence                 2345666678899999998765567789999999999998   333 89999999999999999987 9999998


Q ss_pred             CCccc
Q 018067          354 ANTMK  358 (361)
Q Consensus       354 ~~~~~  358 (361)
                      +..++
T Consensus       392 ~~~~~  396 (398)
T 1kol_A          392 HKTFS  396 (398)
T ss_dssp             TCSSC
T ss_pred             CCccc
Confidence            76654

>2b5w_A Glucose dehydrogenase; nucleotide binding motif, oxidoreductase; HET: FLC NAP; 1.60A {Haloferax mediterranei} PDB: 2b5v_A* 2vwg_A* 2vwh_A* 2vwp_A* 2vwq_A*

Probab=100.00  E-value=2.2e-55  Score=410.86  Aligned_cols=327  Identities=18%  Similarity=0.205  Sum_probs=277.9

Q ss_pred             cceeeeeecCCCCCccceeeccCCCCCCeEEEEEeeeccCcchHHhHhcCCCCCCC---CCcccccccEEEEEeCCCCCC
Q 018067           11 KNAFGWAAKDTSGVLSPFHFSRRATGEKDVTFKVTHCGICHSDLHMIKNEWGNTIY---PIVPGHEIVGVVTEVGSKVSK   87 (361)
Q Consensus        11 ~~~~~~~~~~~~~~l~~~~~~~p~~~~~evlV~v~~~~i~~~D~~~~~g~~~~~~~---p~~lG~e~~G~Vv~vG~~v~~   87 (361)
                      |+++.+..++.  .++++++|.|+|+++||||||+++|||++|++.++|.++...+   |.++|||++| |+++|++ ++
T Consensus         1 MkA~~~~~~~~--~l~~~~~p~P~~~~~eVlVkv~a~gi~~~D~~~~~g~~~~~~~~~~p~v~G~E~~G-V~~vG~~-~~   76 (357)
T 2b5w_A            1 MKAIAVKRGED--RPVVIEKPRPEPESGEALVRTLRVGVCGTDHEVIAGGHGGFPEGEDHLVLGHEAVG-VVVDPND-TE   76 (357)
T ss_dssp             CEEEEEETTCS--SCEEEECCCCCCCTTEEEEEEEEEEECHHHHHHHHSCSTTSCTTCSEEECCSEEEE-EEEECTT-SS
T ss_pred             CeEEEEeCCCC--ceEEEECCCCCCCcCEEEEEEeEEeechhcHHHHcCCCCCCCCCCCCcccCceeEE-EEEECCC-CC
Confidence            56666644322  3889999999999999999999999999999999987654456   8999999999 9999999 99


Q ss_pred             CCCCCEEEeccccCC--CCCCcccccCCCCCCcchhcccccccCCCC-cCCCcceeEEeecCCceEECCCCCCccccccc
Q 018067           88 FKVGDKVGVGCMVGS--CRSCDSCAIDLENYCPKVIMTYANKYHDGT-ITYGGYSDIMVADEHFVVRIPEGTPLDATAPL  164 (361)
Q Consensus        88 ~~~GdrV~~~~~~~~--c~~c~~c~~~~~~~c~~~~~~~~~~~~~~~-~~~g~~a~~v~v~~~~~~~ip~~~~~~~aa~l  164 (361)
                      |++||||++.+.. +  |++|.+|++|.+++|++..+..     .|. ..+|+|+||+.+++++++++|++++ + +|++
T Consensus        77 ~~vGdrV~~~~~~-~~~cg~C~~C~~g~~~~C~~~~~~~-----~g~~~~~G~~aey~~v~~~~~~~iP~~~~-~-~aal  148 (357)
T 2b5w_A           77 LEEGDIVVPTVRR-PPASGTNEYFERDQPDMAPDGMYFE-----RGIVGAHGYMSEFFTSPEKYLVRIPRSQA-E-LGFL  148 (357)
T ss_dssp             CCTTCEEEECSEE-CCTTCCCHHHHTTCGGGCCTTSCEE-----ETTBEECCSCBSEEEEEGGGEEECCGGGS-T-TGGG
T ss_pred             CCCCCEEEECCcC-CCCCCCChHHhCcCcccCCCCcccc-----cCccCCCcceeeEEEEchHHeEECCCCcc-h-hhhh
Confidence            9999999987655 5  9999999999999999864320     011 3479999999999999999999999 5 4568


Q ss_pred             chhhhhhhhHhhhcCCCCCC------CEEEEEcCChHHHHH-HHHH-HHcCCe-EEEEeCCch---hHHHHHHHcCCCEE
Q 018067          165 LCAGITVYSPLRFYGLDKPG------MHVGVVGLGGLGHVA-VKFA-KAMGVK-VTVISTSPS---KKSEAIERLGADSF  232 (361)
Q Consensus       165 ~~~~~ta~~~l~~~~~~~~g------~~vlV~Gag~vG~~a-~~la-~~~g~~-vi~~~~~~~---~~~~~~~~~g~~~v  232 (361)
                      +.++.|||+++++ .++++|      ++|||+|+|++|+++ +|+| +.+|++ |++++++++   +++.+ +++|++++
T Consensus       149 ~~~~~ta~~al~~-~~~~~g~~~~~~~~VlV~GaG~vG~~a~iqla~k~~Ga~~Vi~~~~~~~~~~~~~~~-~~lGa~~v  226 (357)
T 2b5w_A          149 IEPISITEKALEH-AYASRSAFDWDPSSAFVLGNGSLGLLTLAMLKVDDKGYENLYCLGRRDRPDPTIDII-EELDATYV  226 (357)
T ss_dssp             HHHHHHHHHHHHH-HHHTTTTSCCCCCEEEEECCSHHHHHHHHHHHHCTTCCCEEEEEECCCSSCHHHHHH-HHTTCEEE
T ss_pred             hchHHHHHHHHHh-cCCCCCcccCCCCEEEEECCCHHHHHHHHHHHHHHcCCcEEEEEeCCcccHHHHHHH-HHcCCccc
Confidence            8899999999954 557999      999999999999999 9999 999997 999998887   66554 89999988


Q ss_pred             ecCCCHHH--HHHhcCCccEEEEcCCCcccHHHHHhccccCCEEEEecCCC-CCcccChHHH----HhCCcEEEecccCC
Q 018067          233 LVSRDQDE--MQAAMGTMDGIIDTVSAVHPLMPLIGLLKSQGKLVLVGAPE-KPLELPAFSL----LMGRKIVGGSMIGG  305 (361)
Q Consensus       233 v~~~~~~~--~~~~~~g~d~vid~~g~~~~~~~~~~~l~~~G~~v~~g~~~-~~~~~~~~~~----~~~~~~i~g~~~~~  305 (361)
                       ++++++.  +.++.+++|+|||++|+...+..++++++++|+++.+|... ....++...+    +.+++++.|+...+
T Consensus       227 -~~~~~~~~~i~~~~gg~Dvvid~~g~~~~~~~~~~~l~~~G~iv~~g~~~~~~~~~~~~~~~~~~~~~~~~i~g~~~~~  305 (357)
T 2b5w_A          227 -DSRQTPVEDVPDVYEQMDFIYEATGFPKHAIQSVQALAPNGVGALLGVPSDWAFEVDAGAFHREMVLHNKALVGSVNSH  305 (357)
T ss_dssp             -ETTTSCGGGHHHHSCCEEEEEECSCCHHHHHHHHHHEEEEEEEEECCCCCCCCCCCCHHHHHHHHHHTTCEEEECCCCC
T ss_pred             -CCCccCHHHHHHhCCCCCEEEECCCChHHHHHHHHHHhcCCEEEEEeCCCCCCceecHHHHhHHHHhCCeEEEEeccCC
Confidence             8765332  44443489999999999766899999999999999999876 5566777777    88999999998888


Q ss_pred             HHHHHHHHHHHHcC--C-CceeE-EEEecccHHHHHHHHHcCCCceEEEEEeCC
Q 018067          306 MKETQEMIDFAAKH--N-IRADI-EVIPADYVNTALERLAKADVRYRFVIDVAN  355 (361)
Q Consensus       306 ~~~~~~~~~ll~~~--~-~~~~~-~~~~l~~~~~a~~~~~~~~~~gkvvi~~~~  355 (361)
                      .++++++++++++|  + +++.+ ++|+|+++++||+.+   +..||+|+++++
T Consensus       306 ~~~~~~~~~l~~~g~~~~~~~~i~~~~~l~~~~~A~~~~---~~~gKvvi~~~~  356 (357)
T 2b5w_A          306 VEHFEAATVTFTKLPKWFLEDLVTGVHPLSEFEAAFDDD---DTTIKTAIEFST  356 (357)
T ss_dssp             HHHHHHHHHHHHHSCHHHHHHHEEEEEEGGGGGGGGCCS---TTCCEEEEECCC
T ss_pred             HHHHHHHHHHHHhCchhhhhhhcceeecHHHHHHHHHHh---CCCceEEEEecC
Confidence            89999999999999  8 57766 899999999999988   346999999864

>3krt_A Crotonyl COA reductase; structural genomics, protein structure initiative, NYSGXRC, PSI-2; 2.19A {Streptomyces coelicolor} PDB: 3hzz_A

Probab=100.00  E-value=4.9e-54  Score=414.05  Aligned_cols=342  Identities=18%  Similarity=0.210  Sum_probs=291.7

Q ss_pred             CCCcccceeeeeecC-------------CCCCccceeeccCCCCCCeEEEEEeeeccCcchHHhHhcC------------
Q 018067            6 EQEHPKNAFGWAAKD-------------TSGVLSPFHFSRRATGEKDVTFKVTHCGICHSDLHMIKNE------------   60 (361)
Q Consensus         6 ~~~~~~~~~~~~~~~-------------~~~~l~~~~~~~p~~~~~evlV~v~~~~i~~~D~~~~~g~------------   60 (361)
                      +.|.+|+++.+...+             .++.++++++|.|+|+++||||||+++|||++|++...+.            
T Consensus        26 ~iP~tmkA~v~~~~~~~~~~~~~~~~~~~~~~l~~~e~p~P~~~~~eVlVkV~a~gic~sD~~~~~~~~~~~~~~~~~~g  105 (456)
T 3krt_A           26 PLPESYRAITVHKDETEMFAGLETRDKDPRKSIHLDDVPVPELGPGEALVAVMASSVNYNSVHTSIFEPLSTFGFLERYG  105 (456)
T ss_dssp             CCCSCEEEEEEEGGGTTTTTTCCGGGCCHHHHCEEEEECCCCCCTTEEEEEEEEEEECHHHHHHHTTCSSCSHHHHHHHH
T ss_pred             CCCcceEEEEEeccccccccccccccCCCCCCcEEEEccCCCCCCCeEEEEEEEEEecchhhhhhhcCcccchhhhhhcc
Confidence            466778888776541             1356889999999999999999999999999998764321            


Q ss_pred             -CC----CCCCC-CcccccccEEEEEeCCCCCCCCCCCEEEeccccCCCCCCcccccCCCCCCcchhcccccccCCCCc-
Q 018067           61 -WG----NTIYP-IVPGHEIVGVVTEVGSKVSKFKVGDKVGVGCMVGSCRSCDSCAIDLENYCPKVIMTYANKYHDGTI-  133 (361)
Q Consensus        61 -~~----~~~~p-~~lG~e~~G~Vv~vG~~v~~~~~GdrV~~~~~~~~c~~c~~c~~~~~~~c~~~~~~~~~~~~~~~~-  133 (361)
                       .+    ...+| .++|||++|+|+++|++|++|++||||++.+.  .|..|..|..+.++.|++....       |.. 
T Consensus       106 ~~~~~~~~~~~P~~v~GhE~~G~Vv~vG~~v~~~~vGdrV~~~~~--~c~~~~~~~~~~~~~c~~~~~~-------G~~~  176 (456)
T 3krt_A          106 RVSDLAKRHDLPYHVIGSDLAGVVLRTGPGVNAWQAGDEVVAHCL--SVELESSDGHNDTMLDPEQRIW-------GFET  176 (456)
T ss_dssp             TSCHHHHTTCCSEEECCSCCEEEEEEECTTCCSCCTTCEEEECCE--ECCCCSGGGTTSGGGCTTCEET-------TTTS
T ss_pred             ccccccccCCCCcccccceeEEEEEEECCCCCCCCCCCEEEEeCC--cccccccccccccccCcccccc-------ccCC
Confidence             11    12456 58999999999999999999999999998653  6888999999999999876432       222 


Q ss_pred             CCCcceeEEeecCCceEECCCCCCcccccccchhhhhhhhHhhhc--CCCCCCCEEEEEcC-ChHHHHHHHHHHHcCCeE
Q 018067          134 TYGGYSDIMVADEHFVVRIPEGTPLDATAPLLCAGITVYSPLRFY--GLDKPGMHVGVVGL-GGLGHVAVKFAKAMGVKV  210 (361)
Q Consensus       134 ~~g~~a~~v~v~~~~~~~ip~~~~~~~aa~l~~~~~ta~~~l~~~--~~~~~g~~vlV~Ga-g~vG~~a~~la~~~g~~v  210 (361)
                      ..|+|+||+++++++++++|+++++++||.+++++.|||+++...  +++++|++|||+|+ |++|++++|+|+.+|++|
T Consensus       177 ~~G~~aey~~v~~~~~~~~P~~l~~~~aa~l~~~~~ta~~al~~~~~~~~~~g~~VlV~GasG~vG~~avqlak~~Ga~v  256 (456)
T 3krt_A          177 NFGGLAEIALVKSNQLMPKPDHLSWEEAAAPGLVNSTAYRQLVSRNGAGMKQGDNVLIWGASGGLGSYATQFALAGGANP  256 (456)
T ss_dssp             SSCSSBSEEEEEGGGEEECCTTSCHHHHHSSHHHHHHHHHHHTSTTTTCCCTTCEEEETTTTSHHHHHHHHHHHHTTCEE
T ss_pred             CCCcccceEEechHHeeECCCCCCHHHHHHhhhHHHHHHHHHHhhcccCCCCCCEEEEECCCCHHHHHHHHHHHHcCCeE
Confidence            359999999999999999999999999999999999999999754  67899999999998 999999999999999999


Q ss_pred             EEEeCCchhHHHHHHHcCCCEEecCCCH--------------------HHHHHhcC--CccEEEEcCCCcccHHHHHhcc
Q 018067          211 TVISTSPSKKSEAIERLGADSFLVSRDQ--------------------DEMQAAMG--TMDGIIDTVSAVHPLMPLIGLL  268 (361)
Q Consensus       211 i~~~~~~~~~~~~~~~~g~~~vv~~~~~--------------------~~~~~~~~--g~d~vid~~g~~~~~~~~~~~l  268 (361)
                      +++++++++++ +++++|++.++++.+.                    +.+.++++  ++|+|||++|+.. +..+++++
T Consensus       257 i~~~~~~~~~~-~~~~lGa~~vi~~~~~d~~~~~~~~~~~~~~~~~~~~~i~~~t~g~g~Dvvid~~G~~~-~~~~~~~l  334 (456)
T 3krt_A          257 ICVVSSPQKAE-ICRAMGAEAIIDRNAEGYRFWKDENTQDPKEWKRFGKRIRELTGGEDIDIVFEHPGRET-FGASVFVT  334 (456)
T ss_dssp             EEEESSHHHHH-HHHHHTCCEEEETTTTTCCSEEETTEECHHHHHHHHHHHHHHHTSCCEEEEEECSCHHH-HHHHHHHE
T ss_pred             EEEECCHHHHH-HHHhhCCcEEEecCcCcccccccccccchHHHHHHHHHHHHHhCCCCCcEEEEcCCchh-HHHHHHHh
Confidence            99998777665 4489999999988763                    34555554  7999999999955 99999999


Q ss_pred             ccCCEEEEecCCCC-CcccChHHHHhCCcEEEecccCCHHHHHHHHHHHHcCCCceeE-EEEecccHHHHHHHHHcCCCc
Q 018067          269 KSQGKLVLVGAPEK-PLELPAFSLLMGRKIVGGSMIGGMKETQEMIDFAAKHNIRADI-EVIPADYVNTALERLAKADVR  346 (361)
Q Consensus       269 ~~~G~~v~~g~~~~-~~~~~~~~~~~~~~~i~g~~~~~~~~~~~~~~ll~~~~~~~~~-~~~~l~~~~~a~~~~~~~~~~  346 (361)
                      +++|+++.+|...+ ...++...++.+++++.|++....+++.++++++++|++++.+ ++|+|+++++||+.+.+++..
T Consensus       335 ~~~G~iv~~G~~~~~~~~~~~~~~~~~~~~i~g~~~~~~~~~~~~~~l~~~g~l~~~i~~~~~l~~~~eA~~~l~~~~~~  414 (456)
T 3krt_A          335 RKGGTITTCASTSGYMHEYDNRYLWMSLKRIIGSHFANYREAWEANRLIAKGRIHPTLSKVYSLEDTGQAAYDVHRNLHQ  414 (456)
T ss_dssp             EEEEEEEESCCTTCSEEEEEHHHHHHTTCEEEECCSCCHHHHHHHHHHHHTTSSCCCEEEEEEGGGHHHHHHHHHTTCSS
T ss_pred             hCCcEEEEEecCCCcccccCHHHHHhcCeEEEEeccCCHHHHHHHHHHHHcCCcccceeEEEcHHHHHHHHHHHHhCCCC
Confidence            99999999998664 3467777788899999999999999999999999999999888 899999999999999999999


Q ss_pred             eEEEEEeCCccc
Q 018067          347 YRFVIDVANTMK  358 (361)
Q Consensus       347 gkvvi~~~~~~~  358 (361)
                      ||+|+.+.++.+
T Consensus       415 GKvvv~~~~~~~  426 (456)
T 3krt_A          415 GKVGVLCLAPEE  426 (456)
T ss_dssp             SEEEEESSCSST
T ss_pred             CcEEEEeCCCCC
Confidence            999999876543

>4dup_A Quinone oxidoreductase; PSI-biology, structural genomics, protein structure initiati structural genomics research consortium, nysgrc; 2.45A {Rhizobium etli}

Probab=100.00  E-value=5.1e-54  Score=400.92  Aligned_cols=314  Identities=22%  Similarity=0.238  Sum_probs=277.0

Q ss_pred             CCCCCCcccceeeeeecCCCCCccceeeccCCCCCCeEEEEEeeeccCcchHHhHhcCCCC-CCCCCcccccccEEEEEe
Q 018067            3 QAPEQEHPKNAFGWAAKDTSGVLSPFHFSRRATGEKDVTFKVTHCGICHSDLHMIKNEWGN-TIYPIVPGHEIVGVVTEV   81 (361)
Q Consensus         3 ~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~p~~~~~evlV~v~~~~i~~~D~~~~~g~~~~-~~~p~~lG~e~~G~Vv~v   81 (361)
                      +++++|.+|+++.+..+++|+.++++++|.|+|+++||||||+++|||++|++.+.|.++. ..+|.++|||++|+|+++
T Consensus        21 ~~~~~p~~MkA~~~~~~g~~~~l~~~~~~~P~~~~~eVlVkv~a~gi~~~D~~~~~g~~~~~~~~p~i~G~E~~G~V~~v  100 (353)
T 4dup_A           21 QSMSLPQEMRFVDLKSFGGPDVMVIGKRPLPVAGEGEVLVRAEAIGVNRPDIAQRQGSYPPPKDASPILGLELSGEIVGV  100 (353)
T ss_dssp             --CCCCSSEEEEEESSSSSGGGEEEEEECCCCCCTTEEEEEEEEEEECHHHHHHHTTSSCCCTTSCSSSCCEEEEEEEEE
T ss_pred             ecCCCChheeEEEEccCCCccceEEEeccCCCCCCCEEEEEEEEEecCHHHHHHhCCCCCCCCCCCCccccccEEEEEEE
Confidence            3566888999999988888888999999999999999999999999999999999997654 357899999999999999


Q ss_pred             CCCCCCCCCCCEEEeccccCCCCCCcccccCCCCCCcchhcccccccCCCCcCCCcceeEEeecCCceEECCCCCCcccc
Q 018067           82 GSKVSKFKVGDKVGVGCMVGSCRSCDSCAIDLENYCPKVIMTYANKYHDGTITYGGYSDIMVADEHFVVRIPEGTPLDAT  161 (361)
Q Consensus        82 G~~v~~~~~GdrV~~~~~~~~c~~c~~c~~~~~~~c~~~~~~~~~~~~~~~~~~g~~a~~v~v~~~~~~~ip~~~~~~~a  161 (361)
                      |++|++|++||||+.                                   ....|+|+||+.++++.++++|+++++++|
T Consensus       101 G~~v~~~~vGdrV~~-----------------------------------~~~~G~~aey~~v~~~~~~~~P~~~~~~~a  145 (353)
T 4dup_A          101 GPGVSGYAVGDKVCG-----------------------------------LANGGAYAEYCLLPAGQILPFPKGYDAVKA  145 (353)
T ss_dssp             CTTCCSCCTTCEEEE-----------------------------------ECSSCCSBSEEEEEGGGEEECCTTCCHHHH
T ss_pred             CCCCCCCCCCCEEEE-----------------------------------ecCCCceeeEEEEcHHHcEeCCCCCCHHHH
Confidence            999999999999974                                   235799999999999999999999999999


Q ss_pred             cccchhhhhhhhHhhhcCCCCCCCEEEEEcC-ChHHHHHHHHHHHcCCeEEEEeCCchhHHHHHHHcCCCEEecCCCHHH
Q 018067          162 APLLCAGITVYSPLRFYGLDKPGMHVGVVGL-GGLGHVAVKFAKAMGVKVTVISTSPSKKSEAIERLGADSFLVSRDQDE  240 (361)
Q Consensus       162 a~l~~~~~ta~~~l~~~~~~~~g~~vlV~Ga-g~vG~~a~~la~~~g~~vi~~~~~~~~~~~~~~~~g~~~vv~~~~~~~  240 (361)
                      |++++++.|||+++.+.+++++|++|||+|+ |++|++++|+|+..|++|+++++++++++.+ +++|++.++++++.+.
T Consensus       146 a~l~~~~~ta~~~l~~~~~~~~g~~VlV~Gg~g~iG~~~~~~a~~~Ga~Vi~~~~~~~~~~~~-~~lGa~~~~~~~~~~~  224 (353)
T 4dup_A          146 AALPETFFTVWANLFQMAGLTEGESVLIHGGTSGIGTTAIQLARAFGAEVYATAGSTGKCEAC-ERLGAKRGINYRSEDF  224 (353)
T ss_dssp             HTSHHHHHHHHHHHTTTTCCCTTCEEEESSTTSHHHHHHHHHHHHTTCEEEEEESSHHHHHHH-HHHTCSEEEETTTSCH
T ss_pred             hhhhhHHHHHHHHHHHhcCCCCCCEEEEEcCCCHHHHHHHHHHHHcCCEEEEEeCCHHHHHHH-HhcCCCEEEeCCchHH
Confidence            9999999999999988888999999999965 9999999999999999999999988876555 7899999999877543


Q ss_pred             ---HHHhc-CCccEEEEcCCCcccHHHHHhccccCCEEEEecCCCCC-cc-cChHHHHhCCcEEEecccCCHHH------
Q 018067          241 ---MQAAM-GTMDGIIDTVSAVHPLMPLIGLLKSQGKLVLVGAPEKP-LE-LPAFSLLMGRKIVGGSMIGGMKE------  308 (361)
Q Consensus       241 ---~~~~~-~g~d~vid~~g~~~~~~~~~~~l~~~G~~v~~g~~~~~-~~-~~~~~~~~~~~~i~g~~~~~~~~------  308 (361)
                         +.+++ .++|++||++|+.. +..++++++++|+++.+|...+. .. ++...++.+++++.|+......+      
T Consensus       225 ~~~~~~~~~~g~Dvvid~~g~~~-~~~~~~~l~~~G~iv~~g~~~~~~~~~~~~~~~~~~~~~i~g~~~~~~~~~~~~~~  303 (353)
T 4dup_A          225 AAVIKAETGQGVDIILDMIGAAY-FERNIASLAKDGCLSIIAFLGGAVAEKVNLSPIMVKRLTVTGSTMRPRTAEEKRAI  303 (353)
T ss_dssp             HHHHHHHHSSCEEEEEESCCGGG-HHHHHHTEEEEEEEEECCCTTCSEEEEEECHHHHHTTCEEEECCSTTSCHHHHHHH
T ss_pred             HHHHHHHhCCCceEEEECCCHHH-HHHHHHHhccCCEEEEEEecCCCcccCCCHHHHHhcCceEEEEeccccchhhhHHH
Confidence               33333 37999999999976 99999999999999999986543 23 67778888999999998765432      


Q ss_pred             ----HHHHHHHHHcCCCceeE-EEEecccHHHHHHHHHcCCCceEEEEEe
Q 018067          309 ----TQEMIDFAAKHNIRADI-EVIPADYVNTALERLAKADVRYRFVIDV  353 (361)
Q Consensus       309 ----~~~~~~ll~~~~~~~~~-~~~~l~~~~~a~~~~~~~~~~gkvvi~~  353 (361)
                          ++++++++++|++++.+ ++|+|+++++||+.+++++..||+|+++
T Consensus       304 ~~~~~~~~~~l~~~g~l~~~i~~~~~l~~~~~A~~~l~~~~~~gKvvl~~  353 (353)
T 4dup_A          304 RDDLLSEVWPLLEAGTVAPVIHKVFAFEDVADAHRLLEEGSHVGKVMLTV  353 (353)
T ss_dssp             HHHHHHHTHHHHHHTSSCCCEEEEEEGGGHHHHHHHHHHTCCSSEEEEEC
T ss_pred             HHHHHHHHHHHHHCCCccCCcceEEeHHHHHHHHHHHHhCCCCceEEEeC
Confidence                77899999999999887 8999999999999999999889999975

>4a0s_A Octenoyl-COA reductase/carboxylase; oxidoreductase, transferase, cinnabaramide PKS biosynthesis; HET: CO8 NAP; 1.90A {Streptomyces SP} PDB: 4a10_A

Probab=100.00  E-value=1.9e-53  Score=409.42  Aligned_cols=342  Identities=19%  Similarity=0.153  Sum_probs=286.9

Q ss_pred             CCCcccceeeeeecC-----------CCCCccceeeccCCCCCCeEEEEEeeeccCcchHHhHh----------------
Q 018067            6 EQEHPKNAFGWAAKD-----------TSGVLSPFHFSRRATGEKDVTFKVTHCGICHSDLHMIK----------------   58 (361)
Q Consensus         6 ~~~~~~~~~~~~~~~-----------~~~~l~~~~~~~p~~~~~evlV~v~~~~i~~~D~~~~~----------------   58 (361)
                      ++|.+|+++.+...+           .++.++++++|.|+|+++||||||+++|||++|++...                
T Consensus        20 ~~p~tmkA~v~~~~~~~~~~~~~~~~~~~~l~~~e~p~P~~~~~eVlVrV~a~gic~sD~~~~~~~~~~~~~~~~~~~~~   99 (447)
T 4a0s_A           20 PVPDTYLALHLRAEDADMFKGVADKDVRKSLRLGEVPMPELAPDEVLVAVMASSINYNTVWSAMFEPIPTFHFLKQNARQ   99 (447)
T ss_dssp             CCCSEEEEEEEEGGGTTTTTTCSSCCHHHHCEEEEEECCCCCTTEEEEEEEEEECCHHHHHHHTTCSSCHHHHHHHHHTT
T ss_pred             CCChhheeeeeeccccccccccccCCCCCCceEEeccCCCCCCCeEEEEEEEEEECcHHhhhhccCcccchhhhhhhccc
Confidence            456778888876654           12468899999999999999999999999999985421                


Q ss_pred             cCCC-CCCCC-CcccccccEEEEEeCCCCCCCCCCCEEEeccccCCCCCCcccccCCCCCCcchhcccccccCCCCcC-C
Q 018067           59 NEWG-NTIYP-IVPGHEIVGVVTEVGSKVSKFKVGDKVGVGCMVGSCRSCDSCAIDLENYCPKVIMTYANKYHDGTIT-Y  135 (361)
Q Consensus        59 g~~~-~~~~p-~~lG~e~~G~Vv~vG~~v~~~~~GdrV~~~~~~~~c~~c~~c~~~~~~~c~~~~~~~~~~~~~~~~~-~  135 (361)
                      +.+. ...+| .++|||++|+|+++|++|++|++||||++.+.. .|+.|. |..+.++.|.+....       |... .
T Consensus       100 g~~~~~~~~P~~v~GhE~~G~V~~vG~~V~~~~vGDrV~~~~~~-~~~~~~-~~~~~~~~c~~~~~~-------G~~~~~  170 (447)
T 4a0s_A          100 GGWATRHDQPYHVLGSDCSGVVVRTGIGVRRWKPGDHVIVHPAH-VDEQEP-ATHGDGMLGTEQRAW-------GFETNF  170 (447)
T ss_dssp             CGGGGGGCCSEEECCSCEEEEEEEECTTCCSCCTTCEEEECSEE-CCTTSG-GGGTCTTCSTTCEET-------TTTSSS
T ss_pred             CccccccCCCCcccccceeEEEEEECCCCCCCCCCCEEEEecCc-CcCccc-ccccccccccccccc-------cccCCC
Confidence            1111 12456 699999999999999999999999999987755 677666 555779999876432       2223 5


Q ss_pred             CcceeEEeecCCceEECCCCCCcccccccchhhhhhhhHhhhc--CCCCCCCEEEEEcC-ChHHHHHHHHHHHcCCeEEE
Q 018067          136 GGYSDIMVADEHFVVRIPEGTPLDATAPLLCAGITVYSPLRFY--GLDKPGMHVGVVGL-GGLGHVAVKFAKAMGVKVTV  212 (361)
Q Consensus       136 g~~a~~v~v~~~~~~~ip~~~~~~~aa~l~~~~~ta~~~l~~~--~~~~~g~~vlV~Ga-g~vG~~a~~la~~~g~~vi~  212 (361)
                      |+|+||+++++++++++|+++++++||.+++++.|||+++...  +++++|++|||+|+ |++|++++|+|+..|++|++
T Consensus       171 G~~aey~~v~~~~~~~iP~~ls~~~aA~l~~~~~tA~~al~~~~~~~~~~g~~VlV~GasG~iG~~a~qla~~~Ga~vi~  250 (447)
T 4a0s_A          171 GGLAEYGVVRASQLLPKPAHLTWEEAAVSPLCAGTAYRMLVSDRGAQMKQGDIVLIWGASGGLGSYAIQFVKNGGGIPVA  250 (447)
T ss_dssp             CSSBSEEEEEGGGEEECCTTSCHHHHHTSHHHHHHHHHHHTSTTTTCCCTTCEEEETTTTSHHHHHHHHHHHHTTCEEEE
T ss_pred             CceeeeeecCHHHcEECCCCCCHHHHHHhHHHHHHHHHHHHhhhccCCCCCCEEEEECCCCHHHHHHHHHHHHcCCEEEE
Confidence            9999999999999999999999999999999999999999643  77899999999998 99999999999999999999


Q ss_pred             EeCCchhHHHHHHHcCCCEEecCCCH---------------------HHHHHhcC-CccEEEEcCCCcccHHHHHhcccc
Q 018067          213 ISTSPSKKSEAIERLGADSFLVSRDQ---------------------DEMQAAMG-TMDGIIDTVSAVHPLMPLIGLLKS  270 (361)
Q Consensus       213 ~~~~~~~~~~~~~~~g~~~vv~~~~~---------------------~~~~~~~~-g~d~vid~~g~~~~~~~~~~~l~~  270 (361)
                      +++++++++.+ +++|++.++++.+.                     +.+.++++ ++|++||++|... +..+++++++
T Consensus       251 ~~~~~~~~~~~-~~lGa~~~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~g~g~Dvvid~~G~~~-~~~~~~~l~~  328 (447)
T 4a0s_A          251 VVSSAQKEAAV-RALGCDLVINRAELGITDDIADDPRRVVETGRKLAKLVVEKAGREPDIVFEHTGRVT-FGLSVIVARR  328 (447)
T ss_dssp             EESSHHHHHHH-HHTTCCCEEEHHHHTCCTTGGGCHHHHHHHHHHHHHHHHHHHSSCCSEEEECSCHHH-HHHHHHHSCT
T ss_pred             EeCCHHHHHHH-HhcCCCEEEecccccccccccccccccchhhhHHHHHHHHHhCCCceEEEECCCchH-HHHHHHHHhc
Confidence            99877776555 88999988876432                     23334444 7999999999975 8999999999


Q ss_pred             CCEEEEecCCCC-CcccChHHHHhCCcEEEecccCCHHHHHHHHHHHHcCCCceeE-EEEecccHHHHHHHHHcCCCceE
Q 018067          271 QGKLVLVGAPEK-PLELPAFSLLMGRKIVGGSMIGGMKETQEMIDFAAKHNIRADI-EVIPADYVNTALERLAKADVRYR  348 (361)
Q Consensus       271 ~G~~v~~g~~~~-~~~~~~~~~~~~~~~i~g~~~~~~~~~~~~~~ll~~~~~~~~~-~~~~l~~~~~a~~~~~~~~~~gk  348 (361)
                      +|+++.+|...+ ...++...++.+++++.|+.....+++.++++++++|++++.+ ++|+|+++++||+.+.+++..||
T Consensus       329 ~G~iv~~G~~~~~~~~~~~~~~~~~~~~i~g~~~~~~~~~~~~~~l~~~g~l~~~i~~~~~l~~~~~A~~~~~~~~~~GK  408 (447)
T 4a0s_A          329 GGTVVTCGSSSGYLHTFDNRYLWMKLKKIVGSHGANHEEQQATNRLFESGAVVPAMSAVYPLAEAAEACRVVQTSRQVGK  408 (447)
T ss_dssp             TCEEEESCCTTCSEEEEEHHHHHHTTCEEEECCSCCHHHHHHHHHHHHTTSSCCCEEEEEEGGGHHHHHHHHHTTCCSSE
T ss_pred             CCEEEEEecCCCcccccCHHHHHhCCCEEEecCCCCHHHHHHHHHHHHcCCcccceeEEEcHHHHHHHHHHHhcCCCceE
Confidence            999999998654 3466777788899999999999999999999999999999887 89999999999999999998999


Q ss_pred             EEEEeCCccc
Q 018067          349 FVIDVANTMK  358 (361)
Q Consensus       349 vvi~~~~~~~  358 (361)
                      +|+.+.++.+
T Consensus       409 vvv~~~~~~~  418 (447)
T 4a0s_A          409 VAVLCMAPEQ  418 (447)
T ss_dssp             EEEESSCCST
T ss_pred             EEEEeCCCCC
Confidence            9999876643

>3qwb_A Probable quinone oxidoreductase; rossmann fold, quinone oxidoreductases, NADPH, cytoplasm and oxidoreductase; HET: NDP; 1.59A {Saccharomyces cerevisiae} PDB: 3qwa_A*

Probab=100.00  E-value=1.4e-52  Score=388.49  Aligned_cols=311  Identities=18%  Similarity=0.214  Sum_probs=272.9

Q ss_pred             CCCcccceeeeeecCCCCCccceeeccCCCCCCeEEEEEeeeccCcchHHhHhcCCCCCCCCCcccccccEEEEEeCCCC
Q 018067            6 EQEHPKNAFGWAAKDTSGVLSPFHFSRRATGEKDVTFKVTHCGICHSDLHMIKNEWGNTIYPIVPGHEIVGVVTEVGSKV   85 (361)
Q Consensus         6 ~~~~~~~~~~~~~~~~~~~l~~~~~~~p~~~~~evlV~v~~~~i~~~D~~~~~g~~~~~~~p~~lG~e~~G~Vv~vG~~v   85 (361)
                      ++|.+|+++.+..+++|+.++++++|.|+|+++||||||+++|||++|++.+.|.++ ..+|.++|||++|+|+++|+++
T Consensus         4 ~~p~~mka~~~~~~g~~~~l~~~~~~~P~~~~~eVlVkv~a~gi~~~D~~~~~G~~~-~~~P~i~G~e~~G~V~~vG~~v   82 (334)
T 3qwb_A            4 TIPEQQKVILIDEIGGYDVIKYEDYPVPSISEEELLIKNKYTGVNYIESYFRKGIYP-CEKPYVLGREASGTVVAKGKGV   82 (334)
T ss_dssp             -CCSEEEEEEESSSSSGGGEEEEEEECCCCCTTEEEEEEEEEECCTTHHHHHHTSSC-CCSSEECCSEEEEEEEEECTTC
T ss_pred             CCchheEEEEEecCCCCceeEEEeccCCCCCCCEEEEEEEEEecCHHHHHHHCCCCC-CCCCCccccceEEEEEEECCCC
Confidence            367788988888777778899999999999999999999999999999999999776 3579999999999999999999


Q ss_pred             CCCCCCCEEEeccccCCCCCCcccccCCCCCCcchhcccccccCCCCcCCCcceeEEeec-CCceEECCCCCCccc---c
Q 018067           86 SKFKVGDKVGVGCMVGSCRSCDSCAIDLENYCPKVIMTYANKYHDGTITYGGYSDIMVAD-EHFVVRIPEGTPLDA---T  161 (361)
Q Consensus        86 ~~~~~GdrV~~~~~~~~c~~c~~c~~~~~~~c~~~~~~~~~~~~~~~~~~g~~a~~v~v~-~~~~~~ip~~~~~~~---a  161 (361)
                      ++|++||||++                                    ..+|+|+||+.++ .+.++++|+++++++   |
T Consensus        83 ~~~~~GdrV~~------------------------------------~~~G~~aey~~v~~~~~~~~~P~~~~~~~~~~a  126 (334)
T 3qwb_A           83 TNFEVGDQVAY------------------------------------ISNSTFAQYSKISSQGPVMKLPKGTSDEELKLY  126 (334)
T ss_dssp             CSCCTTCEEEE------------------------------------ECSSCSBSEEEEETTSSEEECCTTCCHHHHHHH
T ss_pred             CCCCCCCEEEE------------------------------------eeCCcceEEEEecCcceEEECCCCCCHHHhhhh
Confidence            99999999974                                    2479999999999 999999999999999   8


Q ss_pred             cccchhhhhhhhHhhhcCCCCCCCEEEEEcC-ChHHHHHHHHHHHcCCeEEEEeCCchhHHHHHHHcCCCEEecCCCHHH
Q 018067          162 APLLCAGITVYSPLRFYGLDKPGMHVGVVGL-GGLGHVAVKFAKAMGVKVTVISTSPSKKSEAIERLGADSFLVSRDQDE  240 (361)
Q Consensus       162 a~l~~~~~ta~~~l~~~~~~~~g~~vlV~Ga-g~vG~~a~~la~~~g~~vi~~~~~~~~~~~~~~~~g~~~vv~~~~~~~  240 (361)
                      +++++.+.|||+++.+..++++|++|||+|+ |++|++++|+|+..|++|+++++++++++ +++++|++.++++++++.
T Consensus       127 a~~~~~~~ta~~~l~~~~~~~~g~~vlV~Ga~g~iG~~~~~~a~~~Ga~Vi~~~~~~~~~~-~~~~~ga~~~~~~~~~~~  205 (334)
T 3qwb_A          127 AAGLLQVLTALSFTNEAYHVKKGDYVLLFAAAGGVGLILNQLLKMKGAHTIAVASTDEKLK-IAKEYGAEYLINASKEDI  205 (334)
T ss_dssp             HHHHHHHHHHHHHHHTTSCCCTTCEEEESSTTBHHHHHHHHHHHHTTCEEEEEESSHHHHH-HHHHTTCSEEEETTTSCH
T ss_pred             hhhhhHHHHHHHHHHHhccCCCCCEEEEECCCCHHHHHHHHHHHHCCCEEEEEeCCHHHHH-HHHHcCCcEEEeCCCchH
Confidence            8899999999999998888999999999995 99999999999999999999999887765 558899999999877543


Q ss_pred             ---HHHhcC--CccEEEEcCCCcccHHHHHhccccCCEEEEecCCCCCc-ccChHHHHhCCcEEEecccC----CHHH--
Q 018067          241 ---MQAAMG--TMDGIIDTVSAVHPLMPLIGLLKSQGKLVLVGAPEKPL-ELPAFSLLMGRKIVGGSMIG----GMKE--  308 (361)
Q Consensus       241 ---~~~~~~--g~d~vid~~g~~~~~~~~~~~l~~~G~~v~~g~~~~~~-~~~~~~~~~~~~~i~g~~~~----~~~~--  308 (361)
                         +.++++  ++|++||++|... +..++++++++|+++.+|...+.. .++...++.|++++.+....    ..++  
T Consensus       206 ~~~~~~~~~~~g~D~vid~~g~~~-~~~~~~~l~~~G~iv~~G~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  284 (334)
T 3qwb_A          206 LRQVLKFTNGKGVDASFDSVGKDT-FEISLAALKRKGVFVSFGNASGLIPPFSITRLSPKNITLVRPQLYGYIADPEEWK  284 (334)
T ss_dssp             HHHHHHHTTTSCEEEEEECCGGGG-HHHHHHHEEEEEEEEECCCTTCCCCCBCGGGGTTTTCEEECCCGGGGSCSHHHHH
T ss_pred             HHHHHHHhCCCCceEEEECCChHH-HHHHHHHhccCCEEEEEcCCCCCCCCcchhhhhhCceEEEEEEeccccCCHHHHH
Confidence               344443  7999999999865 999999999999999999876543 67777788899999975432    3333  


Q ss_pred             --HHHHHHHHHcCCCceeE-EEEecccHHHHHHHHHcCCCceEEEEEeCC
Q 018067          309 --TQEMIDFAAKHNIRADI-EVIPADYVNTALERLAKADVRYRFVIDVAN  355 (361)
Q Consensus       309 --~~~~~~ll~~~~~~~~~-~~~~l~~~~~a~~~~~~~~~~gkvvi~~~~  355 (361)
                        ++++++++.+|++++.+ ++|+|+++++||+.+++++..||+|+++++
T Consensus       285 ~~~~~~~~l~~~g~l~~~i~~~~~l~~~~~A~~~~~~~~~~gKvvi~~~q  334 (334)
T 3qwb_A          285 YYSDEFFGLVNSKKLNIKIYKTYPLRDYRTAAADIESRKTVGKLVLEIPQ  334 (334)
T ss_dssp             HHHHHHHHHHHTTSSCCCEEEEEEGGGHHHHHHHHHTTCCCBEEEEECCC
T ss_pred             HHHHHHHHHHHCCCccCceeeEEcHHHHHHHHHHHHhCCCceEEEEecCC
Confidence              47889999999999888 899999999999999999989999999863

>4eye_A Probable oxidoreductase; structural genomics, niaid, national institute of allergy AN infectious diseases; 2.10A {Mycobacterium abscessus}

Probab=100.00  E-value=4.9e-53  Score=392.66  Aligned_cols=308  Identities=23%  Similarity=0.317  Sum_probs=264.2

Q ss_pred             CCCcccceeeeeecCCCCCccceeeccCCCCCCeEEEEEeeeccCcchHHhHhcCCCC-CCCCCcccccccEEEEEeCCC
Q 018067            6 EQEHPKNAFGWAAKDTSGVLSPFHFSRRATGEKDVTFKVTHCGICHSDLHMIKNEWGN-TIYPIVPGHEIVGVVTEVGSK   84 (361)
Q Consensus         6 ~~~~~~~~~~~~~~~~~~~l~~~~~~~p~~~~~evlV~v~~~~i~~~D~~~~~g~~~~-~~~p~~lG~e~~G~Vv~vG~~   84 (361)
                      ++|.+|+++.+..+++|+.++++++|.|+|+++||||||+++|||++|++.++|.++. ..+|.++|||++|+|+++|++
T Consensus        17 ~~p~~MkA~~~~~~g~~~~l~~~~~~~P~~~~~eVlVkv~a~gi~~~D~~~~~g~~~~~~~~p~v~G~E~~G~V~~vG~~   96 (342)
T 4eye_A           17 QGPGSMKAIQAQSLSGPEGLVYTDVETPGAGPNVVVVDVKAAGVCFPDYLMTKGEYQLKMEPPFVPGIETAGVVRSAPEG   96 (342)
T ss_dssp             -CCCEEEEEEECSSSGGGGEEEEEEECCCCCTTCEEEEEEEEECCHHHHHHHTTCSSSCCCSSBCCCSEEEEEEEECCTT
T ss_pred             cCCcceEEEEEecCCCCceeEEEeCCCCCCCCCEEEEEEEEEecCHHHHHHhcCCCCCCCCCCCccceeEEEEEEEECCC
Confidence            3566788888877777888999999999999999999999999999999999997653 478999999999999999999


Q ss_pred             CCCCCCCCEEEeccccCCCCCCcccccCCCCCCcchhcccccccCCCCcCCCcceeEEeecCCceEECCCCCCccccccc
Q 018067           85 VSKFKVGDKVGVGCMVGSCRSCDSCAIDLENYCPKVIMTYANKYHDGTITYGGYSDIMVADEHFVVRIPEGTPLDATAPL  164 (361)
Q Consensus        85 v~~~~~GdrV~~~~~~~~c~~c~~c~~~~~~~c~~~~~~~~~~~~~~~~~~g~~a~~v~v~~~~~~~ip~~~~~~~aa~l  164 (361)
                      ++ |++||||++.                                   ...|+|+||+.++++.++++|+++++++||++
T Consensus        97 v~-~~vGDrV~~~-----------------------------------~~~G~~aey~~v~~~~~~~iP~~~~~~~aa~l  140 (342)
T 4eye_A           97 SG-IKPGDRVMAF-----------------------------------NFIGGYAERVAVAPSNILPTPPQLDDAEAVAL  140 (342)
T ss_dssp             SS-CCTTCEEEEE-----------------------------------CSSCCSBSEEEECGGGEEECCTTSCHHHHHHH
T ss_pred             CC-CCCCCEEEEe-----------------------------------cCCCcceEEEEEcHHHeEECCCCCCHHHHHHh
Confidence            99 9999999742                                   35799999999999999999999999999999


Q ss_pred             chhhhhhhhHhhhcCCCCCCCEEEEEcC-ChHHHHHHHHHHHcCCeEEEEeCCchhHHHHHHHcCCCEEecCCCHH---H
Q 018067          165 LCAGITVYSPLRFYGLDKPGMHVGVVGL-GGLGHVAVKFAKAMGVKVTVISTSPSKKSEAIERLGADSFLVSRDQD---E  240 (361)
Q Consensus       165 ~~~~~ta~~~l~~~~~~~~g~~vlV~Ga-g~vG~~a~~la~~~g~~vi~~~~~~~~~~~~~~~~g~~~vv~~~~~~---~  240 (361)
                      ++++.|||+++.+.+++++|++|||+|+ |++|++++|+|+.+|++|+++++++++++.+ +++|++.+++++ .+   .
T Consensus       141 ~~~~~ta~~~l~~~~~~~~g~~VlV~Gasg~iG~~~~~~a~~~Ga~Vi~~~~~~~~~~~~-~~~ga~~v~~~~-~~~~~~  218 (342)
T 4eye_A          141 IANYHTMYFAYARRGQLRAGETVLVLGAAGGIGTAAIQIAKGMGAKVIAVVNRTAATEFV-KSVGADIVLPLE-EGWAKA  218 (342)
T ss_dssp             TTHHHHHHHHHHTTSCCCTTCEEEESSTTSHHHHHHHHHHHHTTCEEEEEESSGGGHHHH-HHHTCSEEEESS-TTHHHH
T ss_pred             hhHHHHHHHHHHHhcCCCCCCEEEEECCCCHHHHHHHHHHHHcCCEEEEEeCCHHHHHHH-HhcCCcEEecCc-hhHHHH
Confidence            9999999999988888999999999998 9999999999999999999999988876544 789999999887 43   3


Q ss_pred             HHHhcC--CccEEEEcCCCcccHHHHHhccccCCEEEEecCCCCC-cccChHHHHhCCcEEEecccCCH---------HH
Q 018067          241 MQAAMG--TMDGIIDTVSAVHPLMPLIGLLKSQGKLVLVGAPEKP-LELPAFSLLMGRKIVGGSMIGGM---------KE  308 (361)
Q Consensus       241 ~~~~~~--g~d~vid~~g~~~~~~~~~~~l~~~G~~v~~g~~~~~-~~~~~~~~~~~~~~i~g~~~~~~---------~~  308 (361)
                      +.++++  ++|++||++|++. +..++++++++|+++.+|...+. ..++...++.+++++.|+.....         ++
T Consensus       219 v~~~~~~~g~Dvvid~~g~~~-~~~~~~~l~~~G~iv~~G~~~~~~~~~~~~~~~~~~~~i~g~~~~~~~~~~~~~~~~~  297 (342)
T 4eye_A          219 VREATGGAGVDMVVDPIGGPA-FDDAVRTLASEGRLLVVGFAAGGIPTIKVNRLLLRNASLIGVAWGEFLRTHADYLYET  297 (342)
T ss_dssp             HHHHTTTSCEEEEEESCC--C-HHHHHHTEEEEEEEEEC----------CCCCGGGTTCEEEECCHHHHHHHCTTHHHHH
T ss_pred             HHHHhCCCCceEEEECCchhH-HHHHHHhhcCCCEEEEEEccCCCCCccCHHHHhhcCCEEEEEehhhhhhcCHHHHHHH
Confidence            444444  6999999999976 99999999999999999976543 35556667789999999875432         56


Q ss_pred             HHHHHHHHHcCCCceeE-EEEecccHHHHHHHHHcCCCceEEEEEe
Q 018067          309 TQEMIDFAAKHNIRADI-EVIPADYVNTALERLAKADVRYRFVIDV  353 (361)
Q Consensus       309 ~~~~~~ll~~~~~~~~~-~~~~l~~~~~a~~~~~~~~~~gkvvi~~  353 (361)
                      ++++++++++| +++.+ ++|+|+++++||+.+.+++..||+|+++
T Consensus       298 ~~~~~~l~~~g-l~~~i~~~~~l~~~~~A~~~~~~~~~~gKvvl~P  342 (342)
T 4eye_A          298 QAGLEKLVAEG-MRPPVSARIPLSEGRQALQDFADGKVYGKMVLVP  342 (342)
T ss_dssp             HHHHHHHHHTT-CCCCEEEEEEGGGHHHHHHHHHTTCCCSEEEEEC
T ss_pred             HHHHHHHHHcC-CCCCcceEEeHHHHHHHHHHHHhCCCCceEEEeC
Confidence            88999999999 88887 8999999999999999999999999974

>3tqh_A Quinone oxidoreductase; HET: NDP; 2.44A {Coxiella burnetii}

Probab=100.00  E-value=1.1e-52  Score=387.20  Aligned_cols=308  Identities=21%  Similarity=0.212  Sum_probs=266.4

Q ss_pred             ccceeeeeecCCCCCccceeeccCCCCCCeEEEEEeeeccCcchHHhHhcCC-----CCCCCCCcccccccEEEEEeCCC
Q 018067           10 PKNAFGWAAKDTSGVLSPFHFSRRATGEKDVTFKVTHCGICHSDLHMIKNEW-----GNTIYPIVPGHEIVGVVTEVGSK   84 (361)
Q Consensus        10 ~~~~~~~~~~~~~~~l~~~~~~~p~~~~~evlV~v~~~~i~~~D~~~~~g~~-----~~~~~p~~lG~e~~G~Vv~vG~~   84 (361)
                      +|+++.+..++.|+.++++++|.|+|+++||||||+++|||++|++.++|..     ....+|.++|||++|+|+++|++
T Consensus         6 ~Mka~~~~~~g~~~~l~~~~~~~P~~~~~eVlVkv~a~gi~~~D~~~~~g~~~~~~~~~~~~p~v~G~E~~G~V~~vG~~   85 (321)
T 3tqh_A            6 EMKAIQFDQFGPPKVLKLVDTPTPEYRKNQMLIKVHAASLNPIDYKTRNGSGFVAKKLKNNLPSGLGYDFSGEVIELGSD   85 (321)
T ss_dssp             EEEEEEESSSCSGGGEEEEEEECCCCCTTCEEEEEEEEECCHHHHHHHTTCSHHHHHHTTSCSBCCCCEEEEEEEEECTT
T ss_pred             cceEEEEccCCCcceeEEEecCCCCCCCCEEEEEEEEEEcCHHHHHHhcCCccccccccCCCCCcccceeEEEEEEeCCC
Confidence            6888888877778889999999999999999999999999999999998831     23477999999999999999999


Q ss_pred             CCCCCCCCEEEeccccCCCCCCcccccCCCCCCcchhcccccccCCCCcCCCcceeEEeecCCceEECCCCCCccccccc
Q 018067           85 VSKFKVGDKVGVGCMVGSCRSCDSCAIDLENYCPKVIMTYANKYHDGTITYGGYSDIMVADEHFVVRIPEGTPLDATAPL  164 (361)
Q Consensus        85 v~~~~~GdrV~~~~~~~~c~~c~~c~~~~~~~c~~~~~~~~~~~~~~~~~~g~~a~~v~v~~~~~~~ip~~~~~~~aa~l  164 (361)
                      +++|++||||++.+..                               ....|+|+||++++++.++++|+++++++||++
T Consensus        86 v~~~~~GdrV~~~~~~-------------------------------~~~~G~~aey~~v~~~~~~~iP~~~~~~~aa~l  134 (321)
T 3tqh_A           86 VNNVNIGDKVMGIAGF-------------------------------PDHPCCYAEYVCASPDTIIQKLEKLSFLQAASL  134 (321)
T ss_dssp             CCSCCTTCEEEEECST-------------------------------TTCCCCSBSEEEECGGGEEECCTTSCHHHHHHS
T ss_pred             CCCCCCCCEEEEccCC-------------------------------CCCCCcceEEEEecHHHhccCCCCCCHHHHhhh
Confidence            9999999999864311                               135799999999999999999999999999999


Q ss_pred             chhhhhhhhHhhhcCCCCCCCEEEEEc-CChHHHHHHHHHHHcCCeEEEEeCCchhHHHHHHHcCCCEEecCCCHHHHHH
Q 018067          165 LCAGITVYSPLRFYGLDKPGMHVGVVG-LGGLGHVAVKFAKAMGVKVTVISTSPSKKSEAIERLGADSFLVSRDQDEMQA  243 (361)
Q Consensus       165 ~~~~~ta~~~l~~~~~~~~g~~vlV~G-ag~vG~~a~~la~~~g~~vi~~~~~~~~~~~~~~~~g~~~vv~~~~~~~~~~  243 (361)
                      ++++.|||+++ +.+++++|++|||+| +|++|++++|+|+.+|++|+++++ +++ .++++++|+++++++++.+...+
T Consensus       135 ~~~~~ta~~al-~~~~~~~g~~vlV~Ga~G~vG~~a~q~a~~~Ga~vi~~~~-~~~-~~~~~~lGa~~~i~~~~~~~~~~  211 (321)
T 3tqh_A          135 PTAGLTALQAL-NQAEVKQGDVVLIHAGAGGVGHLAIQLAKQKGTTVITTAS-KRN-HAFLKALGAEQCINYHEEDFLLA  211 (321)
T ss_dssp             HHHHHHHHHHH-HHTTCCTTCEEEESSTTSHHHHHHHHHHHHTTCEEEEEEC-HHH-HHHHHHHTCSEEEETTTSCHHHH
T ss_pred             hhHHHHHHHHH-HhcCCCCCCEEEEEcCCcHHHHHHHHHHHHcCCEEEEEec-cch-HHHHHHcCCCEEEeCCCcchhhh
Confidence            99999999999 567789999999997 599999999999999999998874 444 56668999999999988763444


Q ss_pred             hcCCccEEEEcCCCcccHHHHHhccccCCEEEEecCCCCCcccChHHHHhCCcEEEec-ccCCHHHHHHHHHHHHcCCCc
Q 018067          244 AMGTMDGIIDTVSAVHPLMPLIGLLKSQGKLVLVGAPEKPLELPAFSLLMGRKIVGGS-MIGGMKETQEMIDFAAKHNIR  322 (361)
Q Consensus       244 ~~~g~d~vid~~g~~~~~~~~~~~l~~~G~~v~~g~~~~~~~~~~~~~~~~~~~i~g~-~~~~~~~~~~~~~ll~~~~~~  322 (361)
                      ...++|++||++|++. ...++++++++|+++.+|......  ....+..+++++.++ .....++++++++++++|+++
T Consensus       212 ~~~g~D~v~d~~g~~~-~~~~~~~l~~~G~iv~~g~~~~~~--~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~g~l~  288 (321)
T 3tqh_A          212 ISTPVDAVIDLVGGDV-GIQSIDCLKETGCIVSVPTITAGR--VIEVAKQKHRRAFGLLKQFNIEELHYLGKLVSEDKLR  288 (321)
T ss_dssp             CCSCEEEEEESSCHHH-HHHHGGGEEEEEEEEECCSTTHHH--HHHHHHHTTCEEECCCCCCCHHHHHHHHHHHHTTSSC
T ss_pred             hccCCCEEEECCCcHH-HHHHHHhccCCCEEEEeCCCCchh--hhhhhhhcceEEEEEecCCCHHHHHHHHHHHHCCCcc
Confidence            4579999999999988 699999999999999998654322  122456789999985 345678899999999999999


Q ss_pred             eeE-EEEecccHHHHHHHHHcCCCceEEEEEeC
Q 018067          323 ADI-EVIPADYVNTALERLAKADVRYRFVIDVA  354 (361)
Q Consensus       323 ~~~-~~~~l~~~~~a~~~~~~~~~~gkvvi~~~  354 (361)
                      +.+ ++|+|+++++||+.+++++..||+|++++
T Consensus       289 ~~i~~~~~l~~~~~A~~~~~~~~~~gKvvl~~~  321 (321)
T 3tqh_A          289 IEISRIFQLSEAVTAHELLETGHVRGKLVFKVR  321 (321)
T ss_dssp             CCEEEEECGGGHHHHHHHHHTTCCCSEEEEECC
T ss_pred             cccccEEcHHHHHHHHHHHHcCCCCceEEEEeC
Confidence            888 89999999999999999998999999874

>2cdc_A Glucose dehydrogenase glucose 1-dehydrogenase, DHG-1; reductase, oxidoreductase, MDR family; HET: XYS XYP NAP; 1.50A {Sulfolobus solfataricus} PDB: 2cdb_A* 2cd9_A 2cda_A*

Probab=100.00  E-value=3.6e-53  Score=397.22  Aligned_cols=328  Identities=20%  Similarity=0.251  Sum_probs=271.7

Q ss_pred             cceeeeeecCCCCCccceeeccCCCCC-CeEEEEEeeeccCcchHHhHhc--CCCCCCC---CCcccccccEEEEEeCCC
Q 018067           11 KNAFGWAAKDTSGVLSPFHFSRRATGE-KDVTFKVTHCGICHSDLHMIKN--EWGNTIY---PIVPGHEIVGVVTEVGSK   84 (361)
Q Consensus        11 ~~~~~~~~~~~~~~l~~~~~~~p~~~~-~evlV~v~~~~i~~~D~~~~~g--~~~~~~~---p~~lG~e~~G~Vv~vG~~   84 (361)
                      |+++.+..++.  .++++++|.|+|++ +||||||+++|||++|++.++|  .++...+   |.++|||++|+|++  ++
T Consensus         1 MkA~~~~~~g~--~l~~~~~~~P~~~~~~eVlVkv~a~gi~~~D~~~~~g~~~~~~~~~~~~p~v~G~E~~G~V~~--~~   76 (366)
T 2cdc_A            1 MKAIIVKPPNA--GVQVKDVDEKKLDSYGKIKIRTIYNGICGADREIVNGKLTLSTLPKGKDFLVLGHEAIGVVEE--SY   76 (366)
T ss_dssp             CEEEEECTTSC--CCEEEECCGGGSCCCSSEEEEEEEEEECHHHHHHHTTCC-------CCSCEECCSEEEEEECS--CC
T ss_pred             CeEEEEeCCCC--ceEEEECcCCCCCCCCEEEEEEEEEeeccccHHHHcCCCCCCCCCcCCCCCcCCcceEEEEEe--CC
Confidence            66777655433  28889999999999 9999999999999999999998  5543456   89999999999999  77


Q ss_pred             CCCCCCCCEEEeccccCCCCCCcccccCCCCCCcchhcccccccCCCCc-CCCcceeEEeecCCceEECCCCCCcccccc
Q 018067           85 VSKFKVGDKVGVGCMVGSCRSCDSCAIDLENYCPKVIMTYANKYHDGTI-TYGGYSDIMVADEHFVVRIPEGTPLDATAP  163 (361)
Q Consensus        85 v~~~~~GdrV~~~~~~~~c~~c~~c~~~~~~~c~~~~~~~~~~~~~~~~-~~g~~a~~v~v~~~~~~~ip~~~~~~~aa~  163 (361)
                       ++|++||||++.+.. +||+|.+|++|.+++|++..+..     .|.. ..|+|+||++++++.++++|++++ ++|+ 
T Consensus        77 -~~~~~GDrV~~~~~~-~cg~C~~C~~g~~~~C~~~~~~~-----~g~~~~~G~~aey~~v~~~~~~~iP~~l~-~~Aa-  147 (366)
T 2cdc_A           77 -HGFSQGDLVMPVNRR-GCGICRNCLVGRPDFCETGEFGE-----AGIHKMDGFMREWWYDDPKYLVKIPKSIE-DIGI-  147 (366)
T ss_dssp             -SSCCTTCEEEECSEE-CCSSSHHHHTTCGGGCSSSCCEE-----ETTBEECCSCBSEEEECGGGEEEECGGGT-TTGG-
T ss_pred             -CCCCCCCEEEEcCCC-CCCCChhhhCcCcccCCCCCccc-----CCccCCCCceeEEEEechHHeEECcCCcc-hhhh-
Confidence             889999999987766 99999999999999999764310     0122 579999999999999999999999 7764 


Q ss_pred             cchhhhhhhhHhh--h--cCCCC--C-------CCEEEEEcCChHHHHHHHHHHHcCCeEEEEeCCc---hhHHHHHHHc
Q 018067          164 LLCAGITVYSPLR--F--YGLDK--P-------GMHVGVVGLGGLGHVAVKFAKAMGVKVTVISTSP---SKKSEAIERL  227 (361)
Q Consensus       164 l~~~~~ta~~~l~--~--~~~~~--~-------g~~vlV~Gag~vG~~a~~la~~~g~~vi~~~~~~---~~~~~~~~~~  227 (361)
                      ++.++.|||+++.  .  ..+++  +       |++|||+|+|++|++++|+|+.+|++|+++++++   +++ ++++++
T Consensus       148 l~~~~~ta~~al~~~~~~~~~~~~~~~~~~~~~g~~VlV~GaG~vG~~~~q~a~~~Ga~Vi~~~~~~~~~~~~-~~~~~~  226 (366)
T 2cdc_A          148 LAQPLADIEKSIEEILEVQKRVPVWTCDDGTLNCRKVLVVGTGPIGVLFTLLFRTYGLEVWMANRREPTEVEQ-TVIEET  226 (366)
T ss_dssp             GHHHHHHHHHHHHHHHHHGGGSSCCSCTTSSSTTCEEEEESCHHHHHHHHHHHHHHTCEEEEEESSCCCHHHH-HHHHHH
T ss_pred             hcCcHHHHHHHHHhhhhcccCccccccccccCCCCEEEEECCCHHHHHHHHHHHhCCCEEEEEeCCccchHHH-HHHHHh
Confidence            7789999999998  3  55678  8       9999999999999999999999999999999987   665 455789


Q ss_pred             CCCEEecCCC--HHHHHHhcCCccEEEEcCCCcccH-HHHHhccccCCEEEEecCCCCC-cccChHH---HHhCCcEEEe
Q 018067          228 GADSFLVSRD--QDEMQAAMGTMDGIIDTVSAVHPL-MPLIGLLKSQGKLVLVGAPEKP-LELPAFS---LLMGRKIVGG  300 (361)
Q Consensus       228 g~~~vv~~~~--~~~~~~~~~g~d~vid~~g~~~~~-~~~~~~l~~~G~~v~~g~~~~~-~~~~~~~---~~~~~~~i~g  300 (361)
                      |++.+ + ++  .+.+.+..+++|++||++|....+ +.++++++++|+++.+|..... ..++...   ++.+++++.|
T Consensus       227 ga~~v-~-~~~~~~~~~~~~~~~d~vid~~g~~~~~~~~~~~~l~~~G~iv~~g~~~~~~~~~~~~~~~~~~~~~~~i~g  304 (366)
T 2cdc_A          227 KTNYY-N-SSNGYDKLKDSVGKFDVIIDATGADVNILGNVIPLLGRNGVLGLFGFSTSGSVPLDYKTLQEIVHTNKTIIG  304 (366)
T ss_dssp             TCEEE-E-CTTCSHHHHHHHCCEEEEEECCCCCTHHHHHHGGGEEEEEEEEECSCCCSCEEEEEHHHHHHHHHTTCEEEE
T ss_pred             CCcee-c-hHHHHHHHHHhCCCCCEEEECCCChHHHHHHHHHHHhcCCEEEEEecCCCCccccChhhhHHHHhcCcEEEE
Confidence            99887 6 54  123333225899999999997657 8999999999999999987654 5667666   8889999999


Q ss_pred             cccCCHHHHHHHHHHHHcCC------CceeE-EEEecccHHHHHHHH-HcCCCceEEEEEeC
Q 018067          301 SMIGGMKETQEMIDFAAKHN------IRADI-EVIPADYVNTALERL-AKADVRYRFVIDVA  354 (361)
Q Consensus       301 ~~~~~~~~~~~~~~ll~~~~------~~~~~-~~~~l~~~~~a~~~~-~~~~~~gkvvi~~~  354 (361)
                      +.....++++++++++++|+      +++.+ ++|+|+++++||+.+ .+++..||+|++++
T Consensus       305 ~~~~~~~~~~~~~~l~~~g~i~~~~~~~~~i~~~~~l~~~~~A~~~l~~~~~~~gKvvi~~~  366 (366)
T 2cdc_A          305 LVNGQKPHFQQAVVHLASWKTLYPKAAKMLITKTVSINDEKELLKVLREKEHGEIKIRILWE  366 (366)
T ss_dssp             CCCCCHHHHHHHHHHHHHHHHHSHHHHTTSEEEEEETTCHHHHHHHHHCCCTTCCEEEEECC
T ss_pred             ecCCCHHHHHHHHHHHHcCCCCcccchhhcEEEEEcHHHHHHHHHHHhhhcCCceEEEEecC
Confidence            98888899999999999998      55666 899999999999994 34556799999864

>3fbg_A Putative arginate lyase; structural genomics, unknown function, PSI-2, protein structure initiative; 1.60A {Staphylococcus haemolyticus}

Probab=100.00  E-value=7e-52  Score=385.59  Aligned_cols=313  Identities=18%  Similarity=0.246  Sum_probs=267.0

Q ss_pred             ccceeeeeecC---CCCCccceeeccCCCCCCeEEEEEeeeccCcchHHhHhcCCCCCCCCCcccccccEEEEEeCCCCC
Q 018067           10 PKNAFGWAAKD---TSGVLSPFHFSRRATGEKDVTFKVTHCGICHSDLHMIKNEWGNTIYPIVPGHEIVGVVTEVGSKVS   86 (361)
Q Consensus        10 ~~~~~~~~~~~---~~~~l~~~~~~~p~~~~~evlV~v~~~~i~~~D~~~~~g~~~~~~~p~~lG~e~~G~Vv~vG~~v~   86 (361)
                      +|+++.+..++   +|+.++++++|.|+|+++||||||++++||++|++.+.|.  ...+|.++|||++|+|+++|++|+
T Consensus         2 ~MkA~~~~~~G~~~~~~~l~~~~~~~P~~~~~eVlVkv~a~gi~~~D~~~~~g~--~~~~p~i~G~e~~G~V~~vG~~v~   79 (346)
T 3fbg_A            2 SLKAIGFEQPFKLSDGNLFKTFNLDIPEPKVHEILVKIQSISVNPVDTKQRLMD--VSKAPRVLGFDAIGVVESVGNEVT   79 (346)
T ss_dssp             CEEEEEBSSCCCGGGCCCCEEEEECCCCCCTTEEEEEEEEEEECHHHHHHTTSC--CSSSCBCCCCCEEEEEEEECTTCC
T ss_pred             CcEEEEEEeccccCCCceeEeccccCCCCCCCEEEEEEEEEEcCHHHHHHHhCC--CCCCCcCcCCccEEEEEEeCCCCC
Confidence            48888887766   6788999999999999999999999999999999998886  347899999999999999999999


Q ss_pred             CCCCCCEEEeccccCCCCCCcccccCCCCCCcchhcccccccCCCCcCCCcceeEEeecCCceEECCCCCCcccccccch
Q 018067           87 KFKVGDKVGVGCMVGSCRSCDSCAIDLENYCPKVIMTYANKYHDGTITYGGYSDIMVADEHFVVRIPEGTPLDATAPLLC  166 (361)
Q Consensus        87 ~~~~GdrV~~~~~~~~c~~c~~c~~~~~~~c~~~~~~~~~~~~~~~~~~g~~a~~v~v~~~~~~~ip~~~~~~~aa~l~~  166 (361)
                      +|++||||+...                                ....+|+|+||+.++++.++++|+++++++||.+++
T Consensus        80 ~~~~GdrV~~~~--------------------------------~~~~~G~~aey~~v~~~~~~~iP~~~~~~~aa~~~~  127 (346)
T 3fbg_A           80 MFNQGDIVYYSG--------------------------------SPDQNGSNAEYQLINERLVAKAPKNISAEQAVSLPL  127 (346)
T ss_dssp             SCCTTCEEEECC--------------------------------CTTSCCSSBSEEEEEGGGEEECCSSSCHHHHTTSHH
T ss_pred             cCCCCCEEEEcC--------------------------------CCCCCcceeEEEEEChHHeEECCCCCCHHHhhhcch
Confidence            999999997532                                124579999999999999999999999999999999


Q ss_pred             hhhhhhhHhhhcCCCC------CCCEEEEEc-CChHHHHHHHHHHHcCCeEEEEeCCchhHHHHHHHcCCCEEecCCCH-
Q 018067          167 AGITVYSPLRFYGLDK------PGMHVGVVG-LGGLGHVAVKFAKAMGVKVTVISTSPSKKSEAIERLGADSFLVSRDQ-  238 (361)
Q Consensus       167 ~~~ta~~~l~~~~~~~------~g~~vlV~G-ag~vG~~a~~la~~~g~~vi~~~~~~~~~~~~~~~~g~~~vv~~~~~-  238 (361)
                      ++.|||+++.+..+++      +|++|||+| +|++|++++|+|+..|++|+++++++++++.+ +++|++.++++++. 
T Consensus       128 ~~~ta~~~l~~~~~~~~~~~~~~g~~VlV~gg~G~vG~~a~qla~~~Ga~Vi~~~~~~~~~~~~-~~lGa~~vi~~~~~~  206 (346)
T 3fbg_A          128 TGITAYETLFDVFGISRNRNENEGKTLLIINGAGGVGSIATQIAKAYGLRVITTASRNETIEWT-KKMGADIVLNHKESL  206 (346)
T ss_dssp             HHHHHHHHHHTTSCCCSSHHHHTTCEEEEESTTSHHHHHHHHHHHHTTCEEEEECCSHHHHHHH-HHHTCSEEECTTSCH
T ss_pred             hHHHHHHHHHHhcCCccccccCCCCEEEEEcCCCHHHHHHHHHHHHcCCEEEEEeCCHHHHHHH-HhcCCcEEEECCccH
Confidence            9999999998888888      999999996 59999999999999999999999888776555 78999999988752 


Q ss_pred             -HHHHHhcC-CccEEEEcCCCcccHHHHHhccccCCEEEEecCCCCCcccChHHHHhCCcEEEecccCC-----------
Q 018067          239 -DEMQAAMG-TMDGIIDTVSAVHPLMPLIGLLKSQGKLVLVGAPEKPLELPAFSLLMGRKIVGGSMIGG-----------  305 (361)
Q Consensus       239 -~~~~~~~~-g~d~vid~~g~~~~~~~~~~~l~~~G~~v~~g~~~~~~~~~~~~~~~~~~~i~g~~~~~-----------  305 (361)
                       +.+.++.+ ++|++|||+|+...+..++++++++|+++.++...  ..++...+..+++++.+++...           
T Consensus       207 ~~~~~~~~~~g~Dvv~d~~g~~~~~~~~~~~l~~~G~iv~~~~~~--~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  284 (346)
T 3fbg_A          207 LNQFKTQGIELVDYVFCTFNTDMYYDDMIQLVKPRGHIATIVAFE--NDQDLNALKPKSLSFSHEFMFARPLNQTDDMIK  284 (346)
T ss_dssp             HHHHHHHTCCCEEEEEESSCHHHHHHHHHHHEEEEEEEEESSCCS--SCBCGGGGTTTTCEEEECCTTHHHHTTCTTTHH
T ss_pred             HHHHHHhCCCCccEEEECCCchHHHHHHHHHhccCCEEEEECCCC--CCCccccccccceEEEEEEEecccccchhhHHH
Confidence             33444433 79999999999876799999999999999998643  3455556777999999876543           


Q ss_pred             -HHHHHHHHHHHHcCCCceeE-EEE---ecccHHHHHHHHHcCCCceEEEEEeCCcccC
Q 018067          306 -MKETQEMIDFAAKHNIRADI-EVI---PADYVNTALERLAKADVRYRFVIDVANTMKS  359 (361)
Q Consensus       306 -~~~~~~~~~ll~~~~~~~~~-~~~---~l~~~~~a~~~~~~~~~~gkvvi~~~~~~~~  359 (361)
                       .+.++++++++++|++++.+ ++|   +|+++++||+.+++++..||+|+.++++.+.
T Consensus       285 ~~~~~~~~~~l~~~g~l~~~i~~~~~~~~l~~~~~A~~~~~~g~~~GKvvl~~~~~~~~  343 (346)
T 3fbg_A          285 HHEYLEDITNKVEQNIYQPTTTKVIEGLTTENIYQAHQILESNTMIGKLVINLNEGHHH  343 (346)
T ss_dssp             HHHHHHHHHHHHHTTSSCCCEEEEEESCCHHHHHHHHHHHHTTCCCSEEEEEC------
T ss_pred             HHHHHHHHHHHHHCCCEECCccceecCCCHHHHHHHHHHHhcCCcceEEEEecCCcccc
Confidence             24588899999999999887 677   9999999999999999999999999987653

>3jyn_A Quinone oxidoreductase; rossmann fold, protein-NADPH complex; HET: NDP; 2.01A {Pseudomonas syringae PV} PDB: 3jyl_A*

Probab=100.00  E-value=3.4e-52  Score=384.46  Aligned_cols=307  Identities=23%  Similarity=0.298  Sum_probs=269.3

Q ss_pred             cceeeeeecCCCCCccceeeccCCCCCCeEEEEEeeeccCcchHHhHhcCCCCCCCCCcccccccEEEEEeCCCCCCCCC
Q 018067           11 KNAFGWAAKDTSGVLSPFHFSRRATGEKDVTFKVTHCGICHSDLHMIKNEWGNTIYPIVPGHEIVGVVTEVGSKVSKFKV   90 (361)
Q Consensus        11 ~~~~~~~~~~~~~~l~~~~~~~p~~~~~evlV~v~~~~i~~~D~~~~~g~~~~~~~p~~lG~e~~G~Vv~vG~~v~~~~~   90 (361)
                      ||++.+..+++|+.+++++++.|+|+++||||||+++|||++|++.+.|.++...+|.++|||++|+|+++|+++++|++
T Consensus         2 MkA~~~~~~g~~~~l~~~~~~~p~~~~~eVlVkv~a~gi~~~D~~~~~g~~~~~~~p~v~G~e~~G~V~~vG~~v~~~~~   81 (325)
T 3jyn_A            2 AKRIQFSTVGGPEVLEYVDFEPEAPGPQAVVVRNKAIGLNFIDTYYRSGLYPAPFLPSGLGAEGAGVVEAVGDEVTRFKV   81 (325)
T ss_dssp             EEEEEBSSCSSGGGCEEEEECCCCCCTTEEEEEEEEEECCHHHHHHHHTSSCCSSSSBCCCCCEEEEEEEECTTCCSCCT
T ss_pred             cEEEEEecCCCcceeEEeecCCCCCCCCEEEEEEEEEecCHHHHHHHCCCCCCCCCCCCCCceeEEEEEEECCCCCCCCC
Confidence            88999988888888999999999999999999999999999999999998776688999999999999999999999999


Q ss_pred             CCEEEeccccCCCCCCcccccCCCCCCcchhcccccccCCCCcCCCcceeEEeecCCceEECCCCCCcccccccchhhhh
Q 018067           91 GDKVGVGCMVGSCRSCDSCAIDLENYCPKVIMTYANKYHDGTITYGGYSDIMVADEHFVVRIPEGTPLDATAPLLCAGIT  170 (361)
Q Consensus        91 GdrV~~~~~~~~c~~c~~c~~~~~~~c~~~~~~~~~~~~~~~~~~g~~a~~v~v~~~~~~~ip~~~~~~~aa~l~~~~~t  170 (361)
                      ||||++..                                  ...|+|+||+.+++++++++|+++++++||++++.+.|
T Consensus        82 GdrV~~~~----------------------------------~~~G~~aey~~v~~~~~~~~P~~~~~~~aa~l~~~~~t  127 (325)
T 3jyn_A           82 GDRVAYGT----------------------------------GPLGAYSEVHVLPEANLVKLADSVSFEQAAALMLKGLT  127 (325)
T ss_dssp             TCEEEESS----------------------------------SSSCCSBSEEEEEGGGEEECCTTSCHHHHHHHHHHHHH
T ss_pred             CCEEEEec----------------------------------CCCccccceEEecHHHeEECCCCCCHHHHhhhhhhHHH
Confidence            99997521                                  35799999999999999999999999999999999999


Q ss_pred             hhhHhhhcCCCCCCCEEEEEcC-ChHHHHHHHHHHHcCCeEEEEeCCchhHHHHHHHcCCCEEecCCCHHH---HHHhcC
Q 018067          171 VYSPLRFYGLDKPGMHVGVVGL-GGLGHVAVKFAKAMGVKVTVISTSPSKKSEAIERLGADSFLVSRDQDE---MQAAMG  246 (361)
Q Consensus       171 a~~~l~~~~~~~~g~~vlV~Ga-g~vG~~a~~la~~~g~~vi~~~~~~~~~~~~~~~~g~~~vv~~~~~~~---~~~~~~  246 (361)
                      ||+++.+.+++++|++|||+|+ |++|++++|+|+..|++|+++++++++++.+ +++|++.++++++.+.   +.++++
T Consensus       128 a~~~l~~~~~~~~g~~VlV~Ga~g~iG~~~~~~a~~~Ga~Vi~~~~~~~~~~~~-~~~Ga~~~~~~~~~~~~~~~~~~~~  206 (325)
T 3jyn_A          128 VQYLLRQTYQVKPGEIILFHAAAGGVGSLACQWAKALGAKLIGTVSSPEKAAHA-KALGAWETIDYSHEDVAKRVLELTD  206 (325)
T ss_dssp             HHHHHHTTSCCCTTCEEEESSTTSHHHHHHHHHHHHHTCEEEEEESSHHHHHHH-HHHTCSEEEETTTSCHHHHHHHHTT
T ss_pred             HHHHHHHhcCCCCCCEEEEEcCCcHHHHHHHHHHHHCCCEEEEEeCCHHHHHHH-HHcCCCEEEeCCCccHHHHHHHHhC
Confidence            9999998888999999999995 9999999999999999999999988776555 7899999999877543   444443


Q ss_pred             --CccEEEEcCCCcccHHHHHhccccCCEEEEecCCCCCc-ccChHHHHhC-CcEEEecc----cCCHH----HHHHHHH
Q 018067          247 --TMDGIIDTVSAVHPLMPLIGLLKSQGKLVLVGAPEKPL-ELPAFSLLMG-RKIVGGSM----IGGMK----ETQEMID  314 (361)
Q Consensus       247 --g~d~vid~~g~~~~~~~~~~~l~~~G~~v~~g~~~~~~-~~~~~~~~~~-~~~i~g~~----~~~~~----~~~~~~~  314 (361)
                        ++|++||++|+.. +..++++++++|+++.+|...+.. .++...+..+ ++.+.+..    ..+.+    .++++++
T Consensus       207 ~~g~Dvvid~~g~~~-~~~~~~~l~~~G~iv~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  285 (325)
T 3jyn_A          207 GKKCPVVYDGVGQDT-WLTSLDSVAPRGLVVSFGNASGPVSGVNLGILAQKDSVYVTRPTLGSYANNAQNLQTMADELFD  285 (325)
T ss_dssp             TCCEEEEEESSCGGG-HHHHHTTEEEEEEEEECCCTTCCCCSCCTHHHHHTTSCEEECCCHHHHSCSTTHHHHHHHHHHH
T ss_pred             CCCceEEEECCChHH-HHHHHHHhcCCCEEEEEecCCCCCCCCCHHHHhhcCcEEEEeeeeeeecCCHHHHHHHHHHHHH
Confidence              7999999999965 999999999999999999876543 5666676666 67776533    22223    3458899


Q ss_pred             HHHcCCCceeE-EEEecccHHHHHHHHHcCCCceEEEEEe
Q 018067          315 FAAKHNIRADI-EVIPADYVNTALERLAKADVRYRFVIDV  353 (361)
Q Consensus       315 ll~~~~~~~~~-~~~~l~~~~~a~~~~~~~~~~gkvvi~~  353 (361)
                      ++++|++++.+ ++|||+++++||+.+.+++..||+|+.+
T Consensus       286 l~~~g~l~~~i~~~~~l~~~~~A~~~~~~~~~~Gkvvl~p  325 (325)
T 3jyn_A          286 MLASGKLKVDGIEQYALKDAAKAQIELSARRTTGSTILIP  325 (325)
T ss_dssp             HHHTTSSCCCCCEEEEGGGHHHHHHHHHTTCCCSCEEEEC
T ss_pred             HHHCCCeeCccccEEcHHHHHHHHHHHHcCCCCceEEEeC
Confidence            99999999887 8999999999999999999999999874

>4dvj_A Putative zinc-dependent alcohol dehydrogenase Pro; structural genomics, PSI-biology, NEW YORK structural genomi research consortium, nysgrc; 1.99A {Rhizobium etli}

Probab=100.00  E-value=1.2e-51  Score=385.99  Aligned_cols=310  Identities=18%  Similarity=0.245  Sum_probs=267.6

Q ss_pred             ccceeeeeec---CCCCCccceeeccCCCCCCeEEEEEeeeccCcchHHhHhcCCCCCCCCCcccccccEEEEEeCCCCC
Q 018067           10 PKNAFGWAAK---DTSGVLSPFHFSRRATGEKDVTFKVTHCGICHSDLHMIKNEWGNTIYPIVPGHEIVGVVTEVGSKVS   86 (361)
Q Consensus        10 ~~~~~~~~~~---~~~~~l~~~~~~~p~~~~~evlV~v~~~~i~~~D~~~~~g~~~~~~~p~~lG~e~~G~Vv~vG~~v~   86 (361)
                      +|+++.+..+   ++|+.++++++|.|+|+++||||||+++|||++|++.+.|..+...+|.++|||++|+|+++|++|+
T Consensus        22 ~MkA~~~~~~~~~~~~~~l~~~~~p~P~~~~~eVlVkv~a~gi~~~D~~~~~g~~~~~~~p~v~G~E~~G~V~~vG~~v~  101 (363)
T 4dvj_A           22 SMKAVGYNKPAPITDDASLLDIELPKPAPAGHDILVEVKAVSVNPVDYKVRRSTPPDGTDWKVIGYDAAGIVSAVGPDVT  101 (363)
T ss_dssp             EEEEEEBSSCCCTTSTTSSEEEEEECCCCCTTEEEEEEEEEECCHHHHHHHHHCCC--CCSBCCCCCEEEEEEEECTTCC
T ss_pred             eeEEEEEeccCCCCCCceEEEeecCCCCCCCCEEEEEEEEEEeCHHHHHHHcCCCCCCCCCCcccceeEEEEEEeCCCCC
Confidence            5777777666   5678899999999999999999999999999999999999877668899999999999999999999


Q ss_pred             CCCCCCEEEeccccCCCCCCcccccCCCCCCcchhcccccccCCCCcCCCcceeEEeecCCceEECCCCCCcccccccch
Q 018067           87 KFKVGDKVGVGCMVGSCRSCDSCAIDLENYCPKVIMTYANKYHDGTITYGGYSDIMVADEHFVVRIPEGTPLDATAPLLC  166 (361)
Q Consensus        87 ~~~~GdrV~~~~~~~~c~~c~~c~~~~~~~c~~~~~~~~~~~~~~~~~~g~~a~~v~v~~~~~~~ip~~~~~~~aa~l~~  166 (361)
                      +|++||||+...                                +....|+|+||+.++++.++++|+++++++||++++
T Consensus       102 ~~~vGdrV~~~~--------------------------------~~~~~G~~aey~~v~~~~~~~iP~~~~~~~aa~l~~  149 (363)
T 4dvj_A          102 LFRPGDEVFYAG--------------------------------SIIRPGTNAEFHLVDERIVGRKPKTLDWAEAAALPL  149 (363)
T ss_dssp             SCCTTCEEEECC--------------------------------CTTSCCSCBSEEEEEGGGCEECCTTSCHHHHHTSHH
T ss_pred             CCCCCCEEEEcc--------------------------------CCCCCccceEEEEeCHHHeeECCCCCCHHHHHhhhh
Confidence            999999997532                                124579999999999999999999999999999999


Q ss_pred             hhhhhhhHhhhcCCCC-----CCCEEEEEc-CChHHHHHHHHHHH-cCCeEEEEeCCchhHHHHHHHcCCCEEecCCCH-
Q 018067          167 AGITVYSPLRFYGLDK-----PGMHVGVVG-LGGLGHVAVKFAKA-MGVKVTVISTSPSKKSEAIERLGADSFLVSRDQ-  238 (361)
Q Consensus       167 ~~~ta~~~l~~~~~~~-----~g~~vlV~G-ag~vG~~a~~la~~-~g~~vi~~~~~~~~~~~~~~~~g~~~vv~~~~~-  238 (361)
                      ++.|||+++.+..+++     +|++|||+| +|++|++++|+|+. .|++|+++++++++++.+ +++|++.++++++. 
T Consensus       150 ~~~ta~~al~~~~~~~~~~~~~g~~VlV~Ga~G~vG~~a~qlak~~~g~~Vi~~~~~~~~~~~~-~~lGad~vi~~~~~~  228 (363)
T 4dvj_A          150 TSITAWEAFFDRLDVNKPVPGAAPAILIVGGAGGVGSIAVQIARQRTDLTVIATASRPETQEWV-KSLGAHHVIDHSKPL  228 (363)
T ss_dssp             HHHHHHHHHHTTSCTTSCCTTSEEEEEEESTTSHHHHHHHHHHHHHCCSEEEEECSSHHHHHHH-HHTTCSEEECTTSCH
T ss_pred             HHHHHHHHHHHhhCcCcCcCCCCCEEEEECCCCHHHHHHHHHHHHhcCCEEEEEeCCHHHHHHH-HHcCCCEEEeCCCCH
Confidence            9999999998888888     899999999 59999999999998 588999999888776554 88999999998762 


Q ss_pred             -HHHHHhc-CCccEEEEcCCCcccHHHHHhccccCCEEEEecCCCCCcccChHHHHhCCcEEEecccCC-----------
Q 018067          239 -DEMQAAM-GTMDGIIDTVSAVHPLMPLIGLLKSQGKLVLVGAPEKPLELPAFSLLMGRKIVGGSMIGG-----------  305 (361)
Q Consensus       239 -~~~~~~~-~g~d~vid~~g~~~~~~~~~~~l~~~G~~v~~g~~~~~~~~~~~~~~~~~~~i~g~~~~~-----------  305 (361)
                       +.+.++. +++|+||||+|++..+..++++++++|+++.+|..   ..++...+..+++++.++...+           
T Consensus       229 ~~~v~~~~~~g~Dvvid~~g~~~~~~~~~~~l~~~G~iv~~g~~---~~~~~~~~~~k~~~i~~~~~~~~~~~~~~~~~~  305 (363)
T 4dvj_A          229 AAEVAALGLGAPAFVFSTTHTDKHAAEIADLIAPQGRFCLIDDP---SAFDIMLFKRKAVSIHHELMFTRPMFGTPDMSE  305 (363)
T ss_dssp             HHHHHTTCSCCEEEEEECSCHHHHHHHHHHHSCTTCEEEECSCC---SSCCGGGGTTTTCEEEECCTTHHHHHTCTTTHH
T ss_pred             HHHHHHhcCCCceEEEECCCchhhHHHHHHHhcCCCEEEEECCC---CccchHHHhhccceEEEEEeeccccccCcchhh
Confidence             2333443 37999999999886689999999999999999753   3456667778999999876543           


Q ss_pred             -HHHHHHHHHHHHcCCCceeE-EEE---ecccHHHHHHHHHcCCCceEEEEEeCC
Q 018067          306 -MKETQEMIDFAAKHNIRADI-EVI---PADYVNTALERLAKADVRYRFVIDVAN  355 (361)
Q Consensus       306 -~~~~~~~~~ll~~~~~~~~~-~~~---~l~~~~~a~~~~~~~~~~gkvvi~~~~  355 (361)
                       .+.++++++++++|++++.+ +++   +++++++||+.+.+++..||+|+++..
T Consensus       306 ~~~~~~~~~~l~~~g~l~~~i~~~~~~~~l~~~~~A~~~~~~~~~~GKvVl~~~~  360 (363)
T 4dvj_A          306 QGRLLNDVSRLVDEGRLRTTLTNRLSPINAANLKQAHALVESGTARGKVVIEGFG  360 (363)
T ss_dssp             HHHHHHHHHHHHHHTSSCCCEEEEECSCSHHHHHHHHHHHHHTCCCSEEEEECSC
T ss_pred             HHHHHHHHHHHHHCCCeeccccceecCCCHHHHHHHHHHHHhCCCceEEEEeCcc
Confidence             25688999999999999887 555   999999999999999989999999865

>1zsy_A Mitochondrial 2-enoyl thioester reductase; medium-chain dehydrogenase/reductase, oxidoreductase, 2-ENOY thioester reductase; 1.75A {Homo sapiens} PDB: 2vcy_A

Probab=100.00  E-value=4.3e-52  Score=388.59  Aligned_cols=313  Identities=21%  Similarity=0.284  Sum_probs=265.0

Q ss_pred             CCCcccceeeeeecCCCC-CccceeeccCCCCCCeEEEEEeeeccCcchHHhHhcCCCC-CCCCCcccccccEEEEEeCC
Q 018067            6 EQEHPKNAFGWAAKDTSG-VLSPFHFSRRATGEKDVTFKVTHCGICHSDLHMIKNEWGN-TIYPIVPGHEIVGVVTEVGS   83 (361)
Q Consensus         6 ~~~~~~~~~~~~~~~~~~-~l~~~~~~~p~~~~~evlV~v~~~~i~~~D~~~~~g~~~~-~~~p~~lG~e~~G~Vv~vG~   83 (361)
                      ++|.+|+++.+..++.|. .++++++|.|+|+++||||||+++|||++|++.+.|.++. ..+|.++|||++|+|+++|+
T Consensus        22 ~m~~~mka~~~~~~g~~~~~l~~~~~~~P~~~~~eVlVkv~a~gi~~~D~~~~~G~~~~~~~~P~v~G~E~~G~V~~vG~  101 (357)
T 1zsy_A           22 SMPARVRALVYGHHGDPAKVVELKNLELAAVRGSDVRVKMLAAPINPSDINMIQGNYGLLPELPAVGGNEGVAQVVAVGS  101 (357)
T ss_dssp             CCCCCEEEEEESSSSCHHHHEEEEEECCCCCCTTEEEEEEEEEECCHHHHHHHHTCSSCCCCSSEECCSCCEEEEEEECT
T ss_pred             hCchhhEEEEEecCCCccceEEEeeccCCCCCCCEEEEEEEECCCCHHHhhHhcCCCCCCCCCCccccceEEEEEEEeCC
Confidence            466678888876554442 2788899999999999999999999999999999987653 25789999999999999999


Q ss_pred             CCCCCCCCCEEEeccccCCCCCCcccccCCCCCCcchhcccccccCCCCcCCCcceeEEeecCCceEECCCCCCcccccc
Q 018067           84 KVSKFKVGDKVGVGCMVGSCRSCDSCAIDLENYCPKVIMTYANKYHDGTITYGGYSDIMVADEHFVVRIPEGTPLDATAP  163 (361)
Q Consensus        84 ~v~~~~~GdrV~~~~~~~~c~~c~~c~~~~~~~c~~~~~~~~~~~~~~~~~~g~~a~~v~v~~~~~~~ip~~~~~~~aa~  163 (361)
                      +|++|++||||++.+                                  ...|+|+||++++++.++++|+++++++||+
T Consensus       102 ~v~~~~vGdrV~~~~----------------------------------~~~G~~aey~~v~~~~~~~iP~~l~~~~Aa~  147 (357)
T 1zsy_A          102 NVTGLKPGDWVIPAN----------------------------------AGLGTWRTEAVFSEEALIQVPSDIPLQSAAT  147 (357)
T ss_dssp             TCCSCCTTCEEEESS----------------------------------SCSCCSBSEEEEEGGGEEEECSSSCHHHHHH
T ss_pred             CCCCCCCCCEEEEcC----------------------------------CCCccceeEEecCHHHcEECCCCCCHHHHhh
Confidence            999999999998532                                  1369999999999999999999999999999


Q ss_pred             cchhhhhhhhHhhhcCCCCCCCEEEEEcC-ChHHHHHHHHHHHcCCeEEEEeCCchh---HHHHHHHcCCCEEecCCCH-
Q 018067          164 LLCAGITVYSPLRFYGLDKPGMHVGVVGL-GGLGHVAVKFAKAMGVKVTVISTSPSK---KSEAIERLGADSFLVSRDQ-  238 (361)
Q Consensus       164 l~~~~~ta~~~l~~~~~~~~g~~vlV~Ga-g~vG~~a~~la~~~g~~vi~~~~~~~~---~~~~~~~~g~~~vv~~~~~-  238 (361)
                      +++.+.|||+++.+.+++++|++|||+|+ |++|++++|+|+.+|++++++++++++   +.++++++|+++++++++. 
T Consensus       148 l~~~~~ta~~~l~~~~~~~~g~~VlV~Ga~G~vG~~aiqlak~~Ga~vi~~~~~~~~~~~~~~~~~~lGa~~vi~~~~~~  227 (357)
T 1zsy_A          148 LGVNPCTAYRMLMDFEQLQPGDSVIQNASNSGVGQAVIQIAAALGLRTINVVRDRPDIQKLSDRLKSLGAEHVITEEELR  227 (357)
T ss_dssp             TTSHHHHHHHHHHHSSCCCTTCEEEESSTTSHHHHHHHHHHHHHTCEEEEEECCCSCHHHHHHHHHHTTCSEEEEHHHHH
T ss_pred             hcccHHHHHHHHHHHhccCCCCEEEEeCCcCHHHHHHHHHHHHcCCEEEEEecCccchHHHHHHHHhcCCcEEEecCcch
Confidence            99999999999988888999999999998 999999999999999999888876542   3456689999999886542 


Q ss_pred             -HHHHHhcC---CccEEEEcCCCcccHHHHHhccccCCEEEEecCCC-CCcccChHHHHhCCcEEEecccCC--------
Q 018067          239 -DEMQAAMG---TMDGIIDTVSAVHPLMPLIGLLKSQGKLVLVGAPE-KPLELPAFSLLMGRKIVGGSMIGG--------  305 (361)
Q Consensus       239 -~~~~~~~~---g~d~vid~~g~~~~~~~~~~~l~~~G~~v~~g~~~-~~~~~~~~~~~~~~~~i~g~~~~~--------  305 (361)
                       +.+.+++.   ++|+|||++|++. ...++++++++|+++.+|... ....++...++.+++++.|++...        
T Consensus       228 ~~~~~~~~~~~~~~Dvvid~~g~~~-~~~~~~~l~~~G~iv~~G~~~~~~~~~~~~~~~~~~~~i~g~~~~~~~~~~~~~  306 (357)
T 1zsy_A          228 RPEMKNFFKDMPQPRLALNCVGGKS-STELLRQLARGGTMVTYGGMAKQPVVASVSLLIFKDLKLRGFWLSQWKKDHSPD  306 (357)
T ss_dssp             SGGGGGTTSSSCCCSEEEESSCHHH-HHHHHTTSCTTCEEEECCCCTTCCBCCCHHHHHHSCCEEEECCHHHHHHHSCHH
T ss_pred             HHHHHHHHhCCCCceEEEECCCcHH-HHHHHHhhCCCCEEEEEecCCCCCCCCCHHHHHhcCceEEEEEcchhcccCCHH
Confidence             23334332   5999999999887 567999999999999998654 345677777888999999986532        


Q ss_pred             --HHHHHHHHHHHHcCCCceeE-EEEecccHHHHHHHHHcCCCceEEEEEe
Q 018067          306 --MKETQEMIDFAAKHNIRADI-EVIPADYVNTALERLAKADVRYRFVIDV  353 (361)
Q Consensus       306 --~~~~~~~~~ll~~~~~~~~~-~~~~l~~~~~a~~~~~~~~~~gkvvi~~  353 (361)
                        .+.++++++++++|++++.+ ++|||+++++||+.+++++..||+|+++
T Consensus       307 ~~~~~~~~~~~l~~~g~l~~~~~~~~~l~~~~~A~~~~~~~~~~gKvvl~~  357 (357)
T 1zsy_A          307 QFKELILTLCDLIRRGQLTAPACSQVPLQDYQSALEASMKPFISSKQILTM  357 (357)
T ss_dssp             HHHHHHHHHHHHHHTTSSCCCCEEEEEGGGHHHHHHHHTSSSCSSEEEEEC
T ss_pred             HHHHHHHHHHHHHHcCCCcCccceEEcHHHHHHHHHHHHhCCCCCcEEEeC
Confidence              24578899999999999877 8999999999999999988789999974

>3goh_A Alcohol dehydrogenase, zinc-containing; NP_718042.1, alcohol dehydrogenase superfamily protein, ALCO dehydrogenase groes-like domain; 1.55A {Shewanella oneidensis}

Probab=100.00  E-value=6.3e-53  Score=387.79  Aligned_cols=301  Identities=17%  Similarity=0.262  Sum_probs=244.7

Q ss_pred             ccceeeeeecCCCCCccceeeccCCCCCCeEEEEEeeeccCcchHHhHhcCCCCCCCCCcccccccEEEEEeCCCCCCCC
Q 018067           10 PKNAFGWAAKDTSGVLSPFHFSRRATGEKDVTFKVTHCGICHSDLHMIKNEWGNTIYPIVPGHEIVGVVTEVGSKVSKFK   89 (361)
Q Consensus        10 ~~~~~~~~~~~~~~~l~~~~~~~p~~~~~evlV~v~~~~i~~~D~~~~~g~~~~~~~p~~lG~e~~G~Vv~vG~~v~~~~   89 (361)
                      +|+++.+..  +++.++++++|.|+|+++||||||++++||++|++.++|.++...+|.++|||++|+|+++|++|++|+
T Consensus         4 tMka~~~~~--~~~~l~~~~~~~P~~~~~eVlVkv~a~gi~~~D~~~~~g~~~~~~~p~i~G~e~~G~V~~vG~~v~~~~   81 (315)
T 3goh_A            4 QHQVWAYQT--KTHSVTLNSVDIPALAADDILVQNQAIGINPVDWKFIKANPINWSNGHVPGVDGAGVIVKVGAKVDSKM   81 (315)
T ss_dssp             EEEEEEEET--TTTEEEEEEEECCCCCTTEEEEEEEEEEECHHHHHHHHHCTTCCCTTCCCCSEEEEEEEEECTTSCGGG
T ss_pred             ceEEEEEeC--CCCeeEEEecCCCCCCCCEEEEEEEEEecCHHHHHHHcCCCCcCCCCCEeeeeeEEEEEEeCCCCCCCC
Confidence            688877754  678899999999999999999999999999999999999877678899999999999999999999999


Q ss_pred             CCCEEEeccccCCCCCCcccccCCCCCCcchhcccccccCCCCcCCCcceeEEeecCCceEECCCCCCcccccccchhhh
Q 018067           90 VGDKVGVGCMVGSCRSCDSCAIDLENYCPKVIMTYANKYHDGTITYGGYSDIMVADEHFVVRIPEGTPLDATAPLLCAGI  169 (361)
Q Consensus        90 ~GdrV~~~~~~~~c~~c~~c~~~~~~~c~~~~~~~~~~~~~~~~~~g~~a~~v~v~~~~~~~ip~~~~~~~aa~l~~~~~  169 (361)
                      +||||++.+                                +...+|+|+||+.+++++++++|+++++++||++++++.
T Consensus        82 vGdrV~~~~--------------------------------~~~~~G~~aey~~v~~~~~~~iP~~~~~~~aa~l~~~~~  129 (315)
T 3goh_A           82 LGRRVAYHT--------------------------------SLKRHGSFAEFTVLNTDRVMTLPDNLSFERAAALPCPLL  129 (315)
T ss_dssp             TTCEEEEEC--------------------------------CTTSCCSSBSEEEEETTSEEECCTTSCHHHHHTSHHHHH
T ss_pred             CCCEEEEeC--------------------------------CCCCCcccccEEEEcHHHhccCcCCCCHHHHhhCccHHH
Confidence            999998643                                224589999999999999999999999999999999999


Q ss_pred             hhhhHhhhcCCCCCCCEEEEEcCChHHHHHHHHHHHcCCeEEEEeCCchhHHHHHHHcCCCEEecCCCHHHHHHhcCCcc
Q 018067          170 TVYSPLRFYGLDKPGMHVGVVGLGGLGHVAVKFAKAMGVKVTVISTSPSKKSEAIERLGADSFLVSRDQDEMQAAMGTMD  249 (361)
Q Consensus       170 ta~~~l~~~~~~~~g~~vlV~Gag~vG~~a~~la~~~g~~vi~~~~~~~~~~~~~~~~g~~~vv~~~~~~~~~~~~~g~d  249 (361)
                      |||+++ +..++++|++|||+|+|++|++++|+|+.+|++|++++ ++++++. ++++|++++++  +   .+++.+++|
T Consensus       130 ta~~al-~~~~~~~g~~VlV~GaG~vG~~a~qlak~~Ga~Vi~~~-~~~~~~~-~~~lGa~~v~~--d---~~~v~~g~D  201 (315)
T 3goh_A          130 TAWQAF-EKIPLTKQREVLIVGFGAVNNLLTQMLNNAGYVVDLVS-ASLSQAL-AAKRGVRHLYR--E---PSQVTQKYF  201 (315)
T ss_dssp             HHHHHH-TTSCCCSCCEEEEECCSHHHHHHHHHHHHHTCEEEEEC-SSCCHHH-HHHHTEEEEES--S---GGGCCSCEE
T ss_pred             HHHHHH-hhcCCCCCCEEEEECCCHHHHHHHHHHHHcCCEEEEEE-ChhhHHH-HHHcCCCEEEc--C---HHHhCCCcc
Confidence            999999 67779999999999999999999999999999999998 6666554 48899999884  2   233456899


Q ss_pred             EEEEcCCCcccHHHHHhccccCCEEEEecCCCCCcccChH--HHHhCCcEEEeccc-CCH-------HHHHHHHHHHHcC
Q 018067          250 GIIDTVSAVHPLMPLIGLLKSQGKLVLVGAPEKPLELPAF--SLLMGRKIVGGSMI-GGM-------KETQEMIDFAAKH  319 (361)
Q Consensus       250 ~vid~~g~~~~~~~~~~~l~~~G~~v~~g~~~~~~~~~~~--~~~~~~~~i~g~~~-~~~-------~~~~~~~~ll~~~  319 (361)
                      ++||++|++. ...++++++++|+++.+|.......++..  .+..+++++.+++. ...       ++++++++++++|
T Consensus       202 vv~d~~g~~~-~~~~~~~l~~~G~~v~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~g  280 (315)
T 3goh_A          202 AIFDAVNSQN-AAALVPSLKANGHIICIQDRIPAPIDPAFTRTISYHEIALGALHDFGDRQDWQILMQQGEALLTLIAQG  280 (315)
T ss_dssp             EEECC--------TTGGGEEEEEEEEEECCC----------CCSEEEEECGGGHHHHCCHHHHHHHHHHHHHHHHHHHTT
T ss_pred             EEEECCCchh-HHHHHHHhcCCCEEEEEeCCCCccccchhhhcceeeEEEeecccccCChhHHHHHHHHHHHHHHHHHCC
Confidence            9999999987 68899999999999999865432222211  12223333334332 222       2478899999999


Q ss_pred             CCceeE-EEEecccHHHHHHHHHcCCCceEEEEEeCC
Q 018067          320 NIRADI-EVIPADYVNTALERLAKADVRYRFVIDVAN  355 (361)
Q Consensus       320 ~~~~~~-~~~~l~~~~~a~~~~~~~~~~gkvvi~~~~  355 (361)
                      ++++.+ ++|||+++++||+.+.  +..||+|+++++
T Consensus       281 ~l~~~i~~~~~l~~~~~A~~~~~--~~~gKvvi~~~~  315 (315)
T 3goh_A          281 KMEIAAPDIFRFEQMIEALDHSE--QTKLKTVLTLNE  315 (315)
T ss_dssp             SSCCCCCEEEEGGGHHHHHHHHH--HHCCCEEEESCC
T ss_pred             CcccccceEecHHHHHHHHHHHH--hcCCcEEEEecC
Confidence            999887 8999999999999998  556999999864

>3pi7_A NADH oxidoreductase; groes-like fold, NAD(P)-binding rossmann fold, structural GE joint center for structural genomics, JCSG; HET: MSE; 1.71A {Mesorhizobium loti}

Probab=100.00  E-value=3.6e-52  Score=388.05  Aligned_cols=315  Identities=16%  Similarity=0.189  Sum_probs=263.0

Q ss_pred             CCCCCCCCcccceeeee--ec-CCCCCccceee---------ccCCCCCCeEEEEEeeeccCcchHHhHhcCCCC-CCCC
Q 018067            1 MGQAPEQEHPKNAFGWA--AK-DTSGVLSPFHF---------SRRATGEKDVTFKVTHCGICHSDLHMIKNEWGN-TIYP   67 (361)
Q Consensus         1 m~~~~~~~~~~~~~~~~--~~-~~~~~l~~~~~---------~~p~~~~~evlV~v~~~~i~~~D~~~~~g~~~~-~~~p   67 (361)
                      |+ ++++|.+|+++.+.  .+ ++|+.++++++         |.|+|+++||||||+++|||++|++.++|.++. ..+|
T Consensus         2 Ms-~m~~p~~mka~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~P~~~~~eVlVkv~a~gi~~~D~~~~~G~~~~~~~~p   80 (349)
T 3pi7_A            2 MS-PMTIPSEMKALLLVGDGYTKTPSGSALEAMEPYLEQGRIAVPAPGPSQVLIKVNLASINPSDVAFIKGQYGQPRVKG   80 (349)
T ss_dssp             ----CCCCSEEEEEEECSCBSCSSCCCSCCCCSTTTEEEEEEECCCCCTTEEEEEEEEEECCHHHHHHHTTCSSSCBCTT
T ss_pred             CC-CCCCchhheEEEEEccccCCCcccceEEEeecccccccCCCCCCCCCeEEEEEEEecCCHHHHHHhcccCCCCCCCC
Confidence            44 35577788888887  44 46788999999         999999999999999999999999999997653 3689


Q ss_pred             CcccccccEEEEEeCCCC-CCCCCCCEEEeccccCCCCCCcccccCCCCCCcchhcccccccCCCCcCCCcceeEEeecC
Q 018067           68 IVPGHEIVGVVTEVGSKV-SKFKVGDKVGVGCMVGSCRSCDSCAIDLENYCPKVIMTYANKYHDGTITYGGYSDIMVADE  146 (361)
Q Consensus        68 ~~lG~e~~G~Vv~vG~~v-~~~~~GdrV~~~~~~~~c~~c~~c~~~~~~~c~~~~~~~~~~~~~~~~~~g~~a~~v~v~~  146 (361)
                      .++|||++|+|+++|++| ++|++||||++..                                +...+|+|+||+.+++
T Consensus        81 ~v~G~E~~G~V~~vG~~v~~~~~vGdrV~~~~--------------------------------g~~~~G~~aey~~v~~  128 (349)
T 3pi7_A           81 RPAGFEGVGTIVAGGDEPYAKSLVGKRVAFAT--------------------------------GLSNWGSWAEYAVAEA  128 (349)
T ss_dssp             SBCCSEEEEEEEEECSSHHHHHHTTCEEEEEC--------------------------------TTSSCCSSBSEEEEEG
T ss_pred             CCccceEEEEEEEECCCccCCCCCCCEEEEec--------------------------------cCCCCccceeeEeech
Confidence            999999999999999999 9999999998532                                3356899999999999


Q ss_pred             CceEECCCCCCcccccccchhhhhhhhHhhhcCCCCCC-CEEEEEc-CChHHHHHHHHHHHcCCeEEEEeCCchhHHHHH
Q 018067          147 HFVVRIPEGTPLDATAPLLCAGITVYSPLRFYGLDKPG-MHVGVVG-LGGLGHVAVKFAKAMGVKVTVISTSPSKKSEAI  224 (361)
Q Consensus       147 ~~~~~ip~~~~~~~aa~l~~~~~ta~~~l~~~~~~~~g-~~vlV~G-ag~vG~~a~~la~~~g~~vi~~~~~~~~~~~~~  224 (361)
                      ++++++|+++++++||++++.++|||+++++..  ++| ++|||+| +|++|++++|+|+..|++|+++++++++++.+ 
T Consensus       129 ~~~~~iP~~~~~~~aa~l~~~~~ta~~~~~~~~--~~g~~~vli~gg~g~vG~~a~qla~~~Ga~Vi~~~~~~~~~~~~-  205 (349)
T 3pi7_A          129 AACIPLLDTVRDEDGAAMIVNPLTAIAMFDIVK--QEGEKAFVMTAGASQLCKLIIGLAKEEGFRPIVTVRRDEQIALL-  205 (349)
T ss_dssp             GGEEECCTTCCC--GGGSSHHHHHHHHHHHHHH--HHCCSEEEESSTTSHHHHHHHHHHHHHTCEEEEEESCGGGHHHH-
T ss_pred             HHeEECCCCCCHHHHhhccccHHHHHHHHHHHh--hCCCCEEEEeCCCcHHHHHHHHHHHHCCCEEEEEeCCHHHHHHH-
Confidence            999999999999999999999999997776544  566 7888885 59999999999999999999999988876555 


Q ss_pred             HHcCCCEEecCCCHHHHH---HhcC--CccEEEEcCCCcccHHHHHhccccCCEEEEecCCCC-CcccCh-HHHHhCCcE
Q 018067          225 ERLGADSFLVSRDQDEMQ---AAMG--TMDGIIDTVSAVHPLMPLIGLLKSQGKLVLVGAPEK-PLELPA-FSLLMGRKI  297 (361)
Q Consensus       225 ~~~g~~~vv~~~~~~~~~---~~~~--g~d~vid~~g~~~~~~~~~~~l~~~G~~v~~g~~~~-~~~~~~-~~~~~~~~~  297 (361)
                      +++|++.++++++++...   ++++  ++|++||++|+.. +..++++++++|+++.+|.... ...++. ..++.++++
T Consensus       206 ~~~Ga~~~~~~~~~~~~~~v~~~~~~~g~D~vid~~g~~~-~~~~~~~l~~~G~iv~~G~~~~~~~~~~~~~~~~~~~~~  284 (349)
T 3pi7_A          206 KDIGAAHVLNEKAPDFEATLREVMKAEQPRIFLDAVTGPL-ASAIFNAMPKRARWIIYGRLDPDATVIREPGQLIFQHKH  284 (349)
T ss_dssp             HHHTCSEEEETTSTTHHHHHHHHHHHHCCCEEEESSCHHH-HHHHHHHSCTTCEEEECCCSCCSCCCCSCTHHHHHSCCE
T ss_pred             HHcCCCEEEECCcHHHHHHHHHHhcCCCCcEEEECCCChh-HHHHHhhhcCCCEEEEEeccCCCCCCCCchhhhhccccE
Confidence            789999999988765433   3433  8999999999987 7899999999999999997543 456666 778889999


Q ss_pred             EEecccCC---------HHHHHHHHHHHHcCCCceeE-EEEecccHHHHHHHHHcCCCceEEEEEe
Q 018067          298 VGGSMIGG---------MKETQEMIDFAAKHNIRADI-EVIPADYVNTALERLAKADVRYRFVIDV  353 (361)
Q Consensus       298 i~g~~~~~---------~~~~~~~~~ll~~~~~~~~~-~~~~l~~~~~a~~~~~~~~~~gkvvi~~  353 (361)
                      +.|++..+         .++++++++++++|++++.+ ++|+|+++++||+.+. ++..||+|+++
T Consensus       285 i~g~~~~~~~~~~~~~~~~~~~~~~~l~~~g~l~~~i~~~~~l~~~~~A~~~~~-~~~~gKvvl~p  349 (349)
T 3pi7_A          285 IEGFWLSEWMRQFKERRGPAILEAQKRFSDGRWSTDVTAVVPLAEAIAWVPAEL-TKPNGKVFIRP  349 (349)
T ss_dssp             EEECCHHHHHHHTHHHHHHHHHHC-CTTTTSSCCC-CCEEEEHHHHHHHHHHHH-TSSSSCEEEEC
T ss_pred             EEEEEehhhhhhCcHHHHHHHHHHHHHHHcCCcccccceEEcHHHHHHHHHHHh-CCCCceEEEeC
Confidence            99988654         35678888999999999887 8999999999999555 44569999975

>4a27_A Synaptic vesicle membrane protein VAT-1 homolog-L; oxidoreductase; 2.10A {Homo sapiens}

Probab=100.00  E-value=1.4e-51  Score=383.99  Aligned_cols=309  Identities=21%  Similarity=0.335  Sum_probs=258.0

Q ss_pred             ccceeeeeecCCCCCccceeeccCCCCCCeEEEEEeeeccCcchHHhHhcCCCC-CCCCCcccccccEEEEEeCCCCCCC
Q 018067           10 PKNAFGWAAKDTSGVLSPFHFSRRATGEKDVTFKVTHCGICHSDLHMIKNEWGN-TIYPIVPGHEIVGVVTEVGSKVSKF   88 (361)
Q Consensus        10 ~~~~~~~~~~~~~~~l~~~~~~~p~~~~~evlV~v~~~~i~~~D~~~~~g~~~~-~~~p~~lG~e~~G~Vv~vG~~v~~~   88 (361)
                      +|+++.+..+++|+.+++++.+.|+|+++||||||+++|||++|++.+.|.++. ..+|.++|||++|+|+++|+++++|
T Consensus         3 ~mka~~~~~~g~~~~l~~~~~~~p~~~~~eVlVkv~a~gi~~~D~~~~~g~~~~~~~~p~v~G~e~~G~V~~vG~~v~~~   82 (349)
T 4a27_A            3 EMRAVVLAGFGGLNKLRLFRKAMPEPQDGELKIRVKACGLNFIDLMVRQGNIDNPPKTPLVPGFECSGIVEALGDSVKGY   82 (349)
T ss_dssp             CEEEEEECSSSSGGGEEEEEECCCCCCTTEEEEEEEEEEECHHHHHHHHTCSSSCCCSSBCCCSEEEEEEEEECTTCCSC
T ss_pred             eeEEEEEccCCCcceeEEEecCCCCCCCCEEEEEEEEEecCHHHHHHhCCCcCCCCCCCccccceeEEEEEEeCCCCCCC
Confidence            588888877777778999999999999999999999999999999999997653 4789999999999999999999999


Q ss_pred             CCCCEEEeccccCCCCCCcccccCCCCCCcchhcccccccCCCCcCCCcceeEEeecCCceEECCCCCCcccccccchhh
Q 018067           89 KVGDKVGVGCMVGSCRSCDSCAIDLENYCPKVIMTYANKYHDGTITYGGYSDIMVADEHFVVRIPEGTPLDATAPLLCAG  168 (361)
Q Consensus        89 ~~GdrV~~~~~~~~c~~c~~c~~~~~~~c~~~~~~~~~~~~~~~~~~g~~a~~v~v~~~~~~~ip~~~~~~~aa~l~~~~  168 (361)
                      ++||||+..                                   ..+|+|+||+.++.++++++|+++++++||.+++++
T Consensus        83 ~~GdrV~~~-----------------------------------~~~G~~aey~~v~~~~~~~iP~~~~~~~aa~l~~~~  127 (349)
T 4a27_A           83 EIGDRVMAF-----------------------------------VNYNAWAEVVCTPVEFVYKIPDDMSFSEAAAFPMNF  127 (349)
T ss_dssp             CTTCEEEEE-----------------------------------CSSCCSBSEEEEEGGGEEECCTTSCHHHHHTSHHHH
T ss_pred             CCCCEEEEe-----------------------------------cCCCcceEEEEecHHHeEECCCCCCHHHHHHHHHHH
Confidence            999999742                                   357999999999999999999999999999999999


Q ss_pred             hhhhhHhhhcCCCCCCCEEEEEcC-ChHHHHHHHHHHHcC-CeEEEEeCCchhHHHHHHHcCCCEEecCCCHH---HHHH
Q 018067          169 ITVYSPLRFYGLDKPGMHVGVVGL-GGLGHVAVKFAKAMG-VKVTVISTSPSKKSEAIERLGADSFLVSRDQD---EMQA  243 (361)
Q Consensus       169 ~ta~~~l~~~~~~~~g~~vlV~Ga-g~vG~~a~~la~~~g-~~vi~~~~~~~~~~~~~~~~g~~~vv~~~~~~---~~~~  243 (361)
                      .|||+++.+.+++++|++|||+|+ |++|++++|+|+.+| ++|+.++ ++++++ .++ +|++++++ ++.+   .+.+
T Consensus       128 ~ta~~~l~~~~~~~~g~~VlV~Ga~G~vG~~a~qla~~~g~~~V~~~~-~~~~~~-~~~-~ga~~~~~-~~~~~~~~~~~  203 (349)
T 4a27_A          128 VTAYVMLFEVANLREGMSVLVHSAGGGVGQAVAQLCSTVPNVTVFGTA-STFKHE-AIK-DSVTHLFD-RNADYVQEVKR  203 (349)
T ss_dssp             HHHHHHHHTTSCCCTTCEEEESSTTSHHHHHHHHHHTTSTTCEEEEEE-CGGGHH-HHG-GGSSEEEE-TTSCHHHHHHH
T ss_pred             HHHHHHHHHhcCCCCCCEEEEEcCCcHHHHHHHHHHHHcCCcEEEEeC-CHHHHH-HHH-cCCcEEEc-CCccHHHHHHH
Confidence            999999988888999999999998 999999999999985 5888876 445554 445 99999988 4433   3444


Q ss_pred             hcC-CccEEEEcCCCcccHHHHHhccccCCEEEEecCCCCC-----------------cccChHHHHhCCcEEEecccCC
Q 018067          244 AMG-TMDGIIDTVSAVHPLMPLIGLLKSQGKLVLVGAPEKP-----------------LELPAFSLLMGRKIVGGSMIGG  305 (361)
Q Consensus       244 ~~~-g~d~vid~~g~~~~~~~~~~~l~~~G~~v~~g~~~~~-----------------~~~~~~~~~~~~~~i~g~~~~~  305 (361)
                      +++ ++|+||||+|++. +..++++++++|+++.+|.....                 ..++...++.+++++.|+....
T Consensus       204 ~~~~g~Dvv~d~~g~~~-~~~~~~~l~~~G~~v~~G~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~i~g~~~~~  282 (349)
T 4a27_A          204 ISAEGVDIVLDCLCGDN-TGKGLSLLKPLGTYILYGSSNMVTGETKSFFSFAKSWWQVEKVNPIKLYEENKVIAGFSLLN  282 (349)
T ss_dssp             HCTTCEEEEEEECC--------CTTEEEEEEEEEEC-------------------------CHHHHHHHTCEEEEECHHH
T ss_pred             hcCCCceEEEECCCchh-HHHHHHHhhcCCEEEEECCCcccccccccccccccccccccccCHHHHhhcCceEEEEeehh
Confidence            443 8999999999987 68999999999999999974311                 2355667788999999976532


Q ss_pred             -----------HHHHHHHHHHHHcCCCceeE-EEEecccHHHHHHHHHcCCCceEEEEEeCCccc
Q 018067          306 -----------MKETQEMIDFAAKHNIRADI-EVIPADYVNTALERLAKADVRYRFVIDVANTMK  358 (361)
Q Consensus       306 -----------~~~~~~~~~ll~~~~~~~~~-~~~~l~~~~~a~~~~~~~~~~gkvvi~~~~~~~  358 (361)
                                 .++++++++++++|++++.+ ++|+|+++++||+.+.+++..||+|++++++..
T Consensus       283 ~~~~~~~~~~~~~~~~~~~~l~~~g~l~~~i~~~~~l~~~~~A~~~l~~~~~~GKvvi~~~~~~~  347 (349)
T 4a27_A          283 LLFKQGRAGLIRGVVEKLIGLYNQKKIKPVVDSLWALEEVKEAMQRIHDRGNIGKLILDVEKTPT  347 (349)
T ss_dssp             HHHTSCCHHHHHHHHHHHHHHHHTTSCCCCEEEEECGGGHHHHHHHHHTTCCSSEEEEETTCCC-
T ss_pred             eeccccchHHHHHHHHHHHHHHHCCCccccccceECHHHHHHHHHHHHhCCCCceEEEecCCCCC
Confidence                       56799999999999999888 899999999999999999999999999987653

>3gms_A Putative NADPH:quinone reductase; structural genomics, putative quinone oxidoreductase, unknown function, PSI-2; 1.76A {Bacillus thuringiensis}

Probab=100.00  E-value=2.7e-52  Score=387.59  Aligned_cols=312  Identities=16%  Similarity=0.172  Sum_probs=262.8

Q ss_pred             cccceeeeeecCCC-CCccceeeccCCCCCCeEEEEEeeeccCcchHHhHhcCCCC-CCCCCcccccccEEEEEeCCCCC
Q 018067            9 HPKNAFGWAAKDTS-GVLSPFHFSRRATGEKDVTFKVTHCGICHSDLHMIKNEWGN-TIYPIVPGHEIVGVVTEVGSKVS   86 (361)
Q Consensus         9 ~~~~~~~~~~~~~~-~~l~~~~~~~p~~~~~evlV~v~~~~i~~~D~~~~~g~~~~-~~~p~~lG~e~~G~Vv~vG~~v~   86 (361)
                      .+|+++.+..++.| +.++++++|.|+|+++||||||+++|||++|++.+.|.++. ..+|.++|||++|+|+++|++|+
T Consensus         3 ~~mka~~~~~~g~p~~~l~~~~~~~P~~~~~eVlVkv~a~gi~~~D~~~~~g~~~~~~~~p~i~G~E~~G~V~~vG~~v~   82 (340)
T 3gms_A            3 LHGKLIQFHKFGNPKDVLQVEYKNIEPLKDNEVFVRMLVRPINPSDLIPITGAYAHRIPLPNIPGYEGVGIVENVGAFVS   82 (340)
T ss_dssp             CEEEEEEESSCSCHHHHEEEEEEECCCCCTTEEEEEEEEEECCHHHHGGGGTTTTTTSCSSBCCCSCCEEEEEEECTTSC
T ss_pred             cccEEEEEecCCCchheEEEEecCCCCCCCCEEEEEEEEecCCHHHHHHhcCCCCCCCCCCCcCCcceEEEEEEeCCCCC
Confidence            36888888877766 56899999999999999999999999999999999997653 47899999999999999999999


Q ss_pred             CCCCCCEEEeccccCCCCCCcccccCCCCCCcchhcccccccCCCCcCCCcceeEEeecCCceEECCCCCCcccccccch
Q 018067           87 KFKVGDKVGVGCMVGSCRSCDSCAIDLENYCPKVIMTYANKYHDGTITYGGYSDIMVADEHFVVRIPEGTPLDATAPLLC  166 (361)
Q Consensus        87 ~~~~GdrV~~~~~~~~c~~c~~c~~~~~~~c~~~~~~~~~~~~~~~~~~g~~a~~v~v~~~~~~~ip~~~~~~~aa~l~~  166 (361)
                      +|++||||+.                                   ....|+|+||+.+|+++++++|+++++++||++++
T Consensus        83 ~~~vGdrV~~-----------------------------------~~~~G~~aey~~v~~~~~~~vP~~l~~~~aa~l~~  127 (340)
T 3gms_A           83 RELIGKRVLP-----------------------------------LRGEGTWQEYVKTSADFVVPIPDSIDDFTAAQMYI  127 (340)
T ss_dssp             GGGTTCEEEE-----------------------------------CSSSCSSBSEEEEEGGGEEECCTTSCHHHHTTSSH
T ss_pred             CCCCCCEEEe-----------------------------------cCCCccceeEEEcCHHHeEECCCCCCHHHHhhhcc
Confidence            9999999973                                   23579999999999999999999999999999999


Q ss_pred             hhhhhhhHhhhcCCCCCCCEEEEEcC-ChHHHHHHHHHHHcCCeEEEEeCCchhHHHHHHHcCCCEEecCCCHHH---HH
Q 018067          167 AGITVYSPLRFYGLDKPGMHVGVVGL-GGLGHVAVKFAKAMGVKVTVISTSPSKKSEAIERLGADSFLVSRDQDE---MQ  242 (361)
Q Consensus       167 ~~~ta~~~l~~~~~~~~g~~vlV~Ga-g~vG~~a~~la~~~g~~vi~~~~~~~~~~~~~~~~g~~~vv~~~~~~~---~~  242 (361)
                      .++|||+++.+.+++++|++|||+|+ |++|++++|+|+.+|++|+++++++++++.+ +++|++.++++++.+.   +.
T Consensus       128 ~~~ta~~~~~~~~~~~~g~~VlV~Ga~g~iG~~~~~~a~~~Ga~Vi~~~~~~~~~~~~-~~lga~~~~~~~~~~~~~~~~  206 (340)
T 3gms_A          128 NPLTAWVTCTETLNLQRNDVLLVNACGSAIGHLFAQLSQILNFRLIAVTRNNKHTEEL-LRLGAAYVIDTSTAPLYETVM  206 (340)
T ss_dssp             HHHHHHHHHHTTSCCCTTCEEEESSTTSHHHHHHHHHHHHHTCEEEEEESSSTTHHHH-HHHTCSEEEETTTSCHHHHHH
T ss_pred             hHHHHHHHHHHhcccCCCCEEEEeCCccHHHHHHHHHHHHcCCEEEEEeCCHHHHHHH-HhCCCcEEEeCCcccHHHHHH
Confidence            99999999988888999999999998 6999999999999999999999988877555 7899999999877543   44


Q ss_pred             HhcC--CccEEEEcCCCcccHHHHHhccccCCEEEEecCCCCCcccChHHHH-hCCcEEEeccc----------CCHHHH
Q 018067          243 AAMG--TMDGIIDTVSAVHPLMPLIGLLKSQGKLVLVGAPEKPLELPAFSLL-MGRKIVGGSMI----------GGMKET  309 (361)
Q Consensus       243 ~~~~--g~d~vid~~g~~~~~~~~~~~l~~~G~~v~~g~~~~~~~~~~~~~~-~~~~~i~g~~~----------~~~~~~  309 (361)
                      ++++  ++|++||++|+.. ...++++++++|+++.+|...+. .++...+. ..++.+.....          ...+++
T Consensus       207 ~~~~~~g~Dvvid~~g~~~-~~~~~~~l~~~G~iv~~G~~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  284 (340)
T 3gms_A          207 ELTNGIGADAAIDSIGGPD-GNELAFSLRPNGHFLTIGLLSGI-QVNWAEIVTKAKVHANIFHLRHWNDEVSPYKWQETF  284 (340)
T ss_dssp             HHTTTSCEEEEEESSCHHH-HHHHHHTEEEEEEEEECCCTTSC-CCCHHHHHHTSCCEEEECCHHHHHHHSCHHHHHHHH
T ss_pred             HHhCCCCCcEEEECCCChh-HHHHHHHhcCCCEEEEEeecCCC-CCCHHHhhhcccceEEEEEehhhhhhcCHHHHHHHH
Confidence            4443  7999999999987 66777999999999999986542 33333333 24555544332          123578


Q ss_pred             HHHHHHHHcCCCcee-E-EEEecccHHHHHHHHHcCCC-ceEEEEEeCCccc
Q 018067          310 QEMIDFAAKHNIRAD-I-EVIPADYVNTALERLAKADV-RYRFVIDVANTMK  358 (361)
Q Consensus       310 ~~~~~ll~~~~~~~~-~-~~~~l~~~~~a~~~~~~~~~-~gkvvi~~~~~~~  358 (361)
                      +++++++++|++++. + ++|||+++++||+.+++++. .||+++.+.++-+
T Consensus       285 ~~~~~l~~~g~l~~~~i~~~~~l~~~~~A~~~~~~~~~~~GKvvl~~~~~~~  336 (340)
T 3gms_A          285 RHLIRLVENEQLRFMKVHSTYELADVKAAVDVVQSAEKTKGKVFLTSYEGHH  336 (340)
T ss_dssp             HHHHHHHHTTSSCCCCEEEEEEGGGHHHHHHHHHCTTCCSSEEEEECC----
T ss_pred             HHHHHHHHcCCCccccccEEEeHHHHHHHHHHHHhcCCCCCeEEEEEecccc
Confidence            999999999999873 4 89999999999999999984 5999999987643

>2j8z_A Quinone oxidoreductase; medium-chain dehydrogenase- reductases, QUIN oxidoreductase, oxidative stress response; HET: NAP; 2.50A {Homo sapiens} PDB: 2oby_A*

Probab=100.00  E-value=4.3e-51  Score=381.35  Aligned_cols=313  Identities=20%  Similarity=0.246  Sum_probs=265.4

Q ss_pred             CCCCcccceeeeeecCCCCCccceeeccCCCCCCeEEEEEeeeccCcchHHhHhcCCCC-CCCCCcccccccEEEEEeCC
Q 018067            5 PEQEHPKNAFGWAAKDTSGVLSPFHFSRRATGEKDVTFKVTHCGICHSDLHMIKNEWGN-TIYPIVPGHEIVGVVTEVGS   83 (361)
Q Consensus         5 ~~~~~~~~~~~~~~~~~~~~l~~~~~~~p~~~~~evlV~v~~~~i~~~D~~~~~g~~~~-~~~p~~lG~e~~G~Vv~vG~   83 (361)
                      ...+.+|+++.+..++.++.++++++|.|+|+++||||||+++|||++|++.+.|.++. ..+|.++|||++|+|+++|+
T Consensus        17 ~~~~~~Mka~~~~~~g~~~~l~~~~~~~P~~~~~eVlVkv~a~gi~~~D~~~~~G~~~~~~~~p~v~G~E~~G~V~~vG~   96 (354)
T 2j8z_A           17 NLYFQSMLAVHFDKPGGPENLYVKEVAKPSPGEGEVLLKVAASALNRADLMQRQGQYDPPPGASNILGLEASGHVAELGP   96 (354)
T ss_dssp             ----CEEEEEEESSCSSGGGEEEEEEECCCCCTTEEEEEEEEEECCHHHHHHHHTSSCCCTTSCSSSCSEEEEEEEEECS
T ss_pred             ccchhheeEEEEccCCCccceEEeecCCCCCCCCeEEEEEEEeecCHHHHHHhCCCCCCCCCCCcccceeeEEEEEEECC
Confidence            44666788888876666677889999999999999999999999999999999987653 25789999999999999999


Q ss_pred             CC-CCCCCCCEEEeccccCCCCCCcccccCCCCCCcchhcccccccCCCCcCCCcceeEEeecCCceEECCCCCCccccc
Q 018067           84 KV-SKFKVGDKVGVGCMVGSCRSCDSCAIDLENYCPKVIMTYANKYHDGTITYGGYSDIMVADEHFVVRIPEGTPLDATA  162 (361)
Q Consensus        84 ~v-~~~~~GdrV~~~~~~~~c~~c~~c~~~~~~~c~~~~~~~~~~~~~~~~~~g~~a~~v~v~~~~~~~ip~~~~~~~aa  162 (361)
                      +| ++|++||||+..                                   ...|+|+||+.++++.++++|+++++++||
T Consensus        97 ~v~~~~~vGdrV~~~-----------------------------------~~~G~~aey~~v~~~~~~~iP~~ls~~~aa  141 (354)
T 2j8z_A           97 GCQGHWKIGDTAMAL-----------------------------------LPGGGQAQYVTVPEGLLMPIPEGLTLTQAA  141 (354)
T ss_dssp             CC--CCCTTCEEEEE-----------------------------------CSSCCSBSEEEEEGGGEEECCTTCCHHHHT
T ss_pred             CcCCCCCCCCEEEEe-----------------------------------cCCCcceeEEEeCHHHcEECCCCCCHHHHH
Confidence            99 999999999742                                   246999999999999999999999999999


Q ss_pred             ccchhhhhhhhHhhhcCCCCCCCEEEEEcC-ChHHHHHHHHHHHcCCeEEEEeCCchhHHHHHHHcCCCEEecCCCHHH-
Q 018067          163 PLLCAGITVYSPLRFYGLDKPGMHVGVVGL-GGLGHVAVKFAKAMGVKVTVISTSPSKKSEAIERLGADSFLVSRDQDE-  240 (361)
Q Consensus       163 ~l~~~~~ta~~~l~~~~~~~~g~~vlV~Ga-g~vG~~a~~la~~~g~~vi~~~~~~~~~~~~~~~~g~~~vv~~~~~~~-  240 (361)
                      ++++++.|||+++.+.+++++|++|||+|+ |++|++++|+|+..|++|+++++++++++.+ +++|++.++++.+.+. 
T Consensus       142 ~l~~~~~tA~~al~~~~~~~~g~~vlV~Ga~ggiG~~~~~~a~~~Ga~Vi~~~~~~~~~~~~-~~~g~~~~~~~~~~~~~  220 (354)
T 2j8z_A          142 AIPEAWLTAFQLLHLVGNVQAGDYVLIHAGLSGVGTAAIQLTRMAGAIPLVTAGSQKKLQMA-EKLGAAAGFNYKKEDFS  220 (354)
T ss_dssp             TSHHHHHHHHHHHTTTSCCCTTCEEEESSTTSHHHHHHHHHHHHTTCEEEEEESCHHHHHHH-HHHTCSEEEETTTSCHH
T ss_pred             hccchHHHHHHHHHHhcCCCCCCEEEEECCccHHHHHHHHHHHHcCCEEEEEeCCHHHHHHH-HHcCCcEEEecCChHHH
Confidence            999999999999977788999999999995 9999999999999999999999988776665 8899998888876543 


Q ss_pred             --HHHhcC--CccEEEEcCCCcccHHHHHhccccCCEEEEecCCCCC-cccCh-HHHHhCCcEEEecccCCH--H-----
Q 018067          241 --MQAAMG--TMDGIIDTVSAVHPLMPLIGLLKSQGKLVLVGAPEKP-LELPA-FSLLMGRKIVGGSMIGGM--K-----  307 (361)
Q Consensus       241 --~~~~~~--g~d~vid~~g~~~~~~~~~~~l~~~G~~v~~g~~~~~-~~~~~-~~~~~~~~~i~g~~~~~~--~-----  307 (361)
                        +.+.+.  ++|++||++|+.. +..++++++++|+++.+|...+. ..++. ..++.+++++.|+.....  +     
T Consensus       221 ~~~~~~~~~~~~d~vi~~~G~~~-~~~~~~~l~~~G~iv~~G~~~~~~~~~~~~~~~~~~~~~i~g~~~~~~~~~~~~~~  299 (354)
T 2j8z_A          221 EATLKFTKGAGVNLILDCIGGSY-WEKNVNCLALDGRWVLYGLMGGGDINGPLFSKLLFKRGSLITSLLRSRDNKYKQML  299 (354)
T ss_dssp             HHHHHHTTTSCEEEEEESSCGGG-HHHHHHHEEEEEEEEECCCTTCSCCCSCHHHHHHHTTCEEEECCSTTCCHHHHHHH
T ss_pred             HHHHHHhcCCCceEEEECCCchH-HHHHHHhccCCCEEEEEeccCCCccCCChhHHHHhCCCEEEEEEcccccccccHHH
Confidence              334443  7999999999985 89999999999999999976543 45676 677889999999876432  1     


Q ss_pred             ---HHHHHHHHHHcC---CCceeE-EEEecccHHHHHHHHHcCCCceEEEEEeC
Q 018067          308 ---ETQEMIDFAAKH---NIRADI-EVIPADYVNTALERLAKADVRYRFVIDVA  354 (361)
Q Consensus       308 ---~~~~~~~ll~~~---~~~~~~-~~~~l~~~~~a~~~~~~~~~~gkvvi~~~  354 (361)
                         .++++++++++|   ++++.+ ++|+|+++++||+.+.+++..||+|+.++
T Consensus       300 ~~~~~~~~~~l~~~g~~~~l~~~i~~~~~l~~~~~A~~~~~~~~~~gKvvv~~~  353 (354)
T 2j8z_A          300 VNAFTEQILPHFSTEGPQRLLPVLDRIYPVTEIQEAHKYMEANKNIGKIVLELP  353 (354)
T ss_dssp             HHHHHHHTGGGGTC---CCCCCCEEEEEEGGGHHHHHHHHHTTCCSSEEEEECC
T ss_pred             HHHHHHHHHHHHHcCCCccccCccceEEcHHHHHHHHHHHHhCCCCceEEEecC
Confidence               124577888999   888877 89999999999999999888899999875

>1yb5_A Quinone oxidoreductase; medium-chain dehydrogenase/reductase, quinon reduction, structural genomics, structural genomics consort; HET: NAP; 1.85A {Homo sapiens} SCOP: b.35.1.2 c.2.1.1

Probab=100.00  E-value=2e-50  Score=376.12  Aligned_cols=309  Identities=22%  Similarity=0.339  Sum_probs=263.7

Q ss_pred             CcccceeeeeecCCCCCccc-eeeccCCCCCCeEEEEEeeeccCcchHHhHhcCCC-CCCCCCcccccccEEEEEeCCCC
Q 018067            8 EHPKNAFGWAAKDTSGVLSP-FHFSRRATGEKDVTFKVTHCGICHSDLHMIKNEWG-NTIYPIVPGHEIVGVVTEVGSKV   85 (361)
Q Consensus         8 ~~~~~~~~~~~~~~~~~l~~-~~~~~p~~~~~evlV~v~~~~i~~~D~~~~~g~~~-~~~~p~~lG~e~~G~Vv~vG~~v   85 (361)
                      +.+|+++.+..+++|+.+++ +++|.|+|+++||||||+++|||++|++.+.|.++ ...+|.++|||++|+|+++|++|
T Consensus        27 ~~~Mka~~~~~~g~~~~l~~~~~~~~P~~~~~eVlVkv~a~gi~~~D~~~~~G~~~~~~~~P~v~G~E~~G~V~~vG~~v  106 (351)
T 1yb5_A           27 QKLMRAVRVFEFGGPEVLKLRSDIAVPIPKDHQVLIKVHACGVNPVETYIRSGTYSRKPLLPYTPGSDVAGVIEAVGDNA  106 (351)
T ss_dssp             -CEEEEEEESSCSSGGGEEEEEEEECCCCCTTEEEEEEEEEECCHHHHHHHHTCSSCCCCSSBCCCSCEEEEEEEECTTC
T ss_pred             cceEEEEEEccCCCcceeEEeeecCCCCCCCCEEEEEEEEEecCHHHHHHhCCCCCCCCCCCCcCCceeEEEEEEECCCC
Confidence            44688888877677778888 79999999999999999999999999999998664 24679999999999999999999


Q ss_pred             CCCCCCCEEEeccccCCCCCCcccccCCCCCCcchhcccccccCCCCcCCCcceeEEeecCCceEECCCCCCcccccccc
Q 018067           86 SKFKVGDKVGVGCMVGSCRSCDSCAIDLENYCPKVIMTYANKYHDGTITYGGYSDIMVADEHFVVRIPEGTPLDATAPLL  165 (361)
Q Consensus        86 ~~~~~GdrV~~~~~~~~c~~c~~c~~~~~~~c~~~~~~~~~~~~~~~~~~g~~a~~v~v~~~~~~~ip~~~~~~~aa~l~  165 (361)
                      ++|++||||++..                                  ...|+|+||+.++++.++++|+++++++||+++
T Consensus       107 ~~~~vGdrV~~~~----------------------------------~~~G~~aey~~v~~~~~~~~P~~l~~~~aA~l~  152 (351)
T 1yb5_A          107 SAFKKGDRVFTSS----------------------------------TISGGYAEYALAADHTVYKLPEKLDFKQGAAIG  152 (351)
T ss_dssp             TTCCTTCEEEESC----------------------------------CSSCSSBSEEEEEGGGEEECCTTSCHHHHTTTH
T ss_pred             CCCCCCCEEEEeC----------------------------------CCCCcceeEEEECHHHeEECCCCCCHHHHHhhh
Confidence            9999999997522                                  236999999999999999999999999999999


Q ss_pred             hhhhhhhhHhhhcCCCCCCCEEEEEcC-ChHHHHHHHHHHHcCCeEEEEeCCchhHHHHHHHcCCCEEecCCCHHHH---
Q 018067          166 CAGITVYSPLRFYGLDKPGMHVGVVGL-GGLGHVAVKFAKAMGVKVTVISTSPSKKSEAIERLGADSFLVSRDQDEM---  241 (361)
Q Consensus       166 ~~~~ta~~~l~~~~~~~~g~~vlV~Ga-g~vG~~a~~la~~~g~~vi~~~~~~~~~~~~~~~~g~~~vv~~~~~~~~---  241 (361)
                      +++.|||+++.+.+++++|++|||+|+ |++|++++|+|+..|++|+++++++++++ .++++|++.++++++.+..   
T Consensus       153 ~~~~ta~~al~~~~~~~~g~~vlV~GasggiG~~~~~~a~~~Ga~Vi~~~~~~~~~~-~~~~~ga~~~~d~~~~~~~~~~  231 (351)
T 1yb5_A          153 IPYFTAYRALIHSACVKAGESVLVHGASGGVGLAACQIARAYGLKILGTAGTEEGQK-IVLQNGAHEVFNHREVNYIDKI  231 (351)
T ss_dssp             HHHHHHHHHHHTTSCCCTTCEEEEETCSSHHHHHHHHHHHHTTCEEEEEESSHHHHH-HHHHTTCSEEEETTSTTHHHHH
T ss_pred             hHHHHHHHHHHHhhCCCCcCEEEEECCCChHHHHHHHHHHHCCCEEEEEeCChhHHH-HHHHcCCCEEEeCCCchHHHHH
Confidence            999999999987788999999999998 99999999999999999999999887765 5588999998888775433   


Q ss_pred             HHhcC--CccEEEEcCCCcccHHHHHhccccCCEEEEecCCCCCcccChHHHHhCCcEEEeccc--CCHHHHH----HHH
Q 018067          242 QAAMG--TMDGIIDTVSAVHPLMPLIGLLKSQGKLVLVGAPEKPLELPAFSLLMGRKIVGGSMI--GGMKETQ----EMI  313 (361)
Q Consensus       242 ~~~~~--g~d~vid~~g~~~~~~~~~~~l~~~G~~v~~g~~~~~~~~~~~~~~~~~~~i~g~~~--~~~~~~~----~~~  313 (361)
                      .+.++  ++|++||++|+.. +..++++++++|+++.+|.. ....++...++.+++++.|+..  ...++++    .+.
T Consensus       232 ~~~~~~~~~D~vi~~~G~~~-~~~~~~~l~~~G~iv~~g~~-~~~~~~~~~~~~~~~~i~g~~~~~~~~~~~~~~~~~l~  309 (351)
T 1yb5_A          232 KKYVGEKGIDIIIEMLANVN-LSKDLSLLSHGGRVIVVGSR-GTIEINPRDTMAKESSIIGVTLFSSTKEEFQQYAAALQ  309 (351)
T ss_dssp             HHHHCTTCEEEEEESCHHHH-HHHHHHHEEEEEEEEECCCC-SCEEECTHHHHTTTCEEEECCGGGCCHHHHHHHHHHHH
T ss_pred             HHHcCCCCcEEEEECCChHH-HHHHHHhccCCCEEEEEecC-CCCccCHHHHHhCCcEEEEEEeecCCHHHHHHHHHHHH
Confidence            33333  7999999999875 88999999999999999964 3455667777889999999853  3444454    455


Q ss_pred             HHHHcCCCceeE-EEEecccHHHHHHH-HHcCCCceEEEEEe
Q 018067          314 DFAAKHNIRADI-EVIPADYVNTALER-LAKADVRYRFVIDV  353 (361)
Q Consensus       314 ~ll~~~~~~~~~-~~~~l~~~~~a~~~-~~~~~~~gkvvi~~  353 (361)
                      +++.+|++++.+ ++|||+++++||+. +++++..||+|+.+
T Consensus       310 ~~~~~g~l~~~i~~~~~l~~~~~A~~~~~~~~~~~gKvvi~~  351 (351)
T 1yb5_A          310 AGMEIGWLKPVIGSQYPLEKVAEAHENIIHGSGATGKMILLL  351 (351)
T ss_dssp             HHHHHTCCCCCEEEEEEGGGHHHHHHHHHHSSCCSSEEEEEC
T ss_pred             HHHHCCCccCccceEEcHHHHHHHHHHHHHhCCCCeEEEEeC
Confidence            577889999887 89999999999998 56666679999874

>1wly_A CAAR, 2-haloacrylate reductase; NADPH-dependent oxidoreductase, oxidoreductase; 1.30A {Burkholderia SP}

Probab=100.00  E-value=7.4e-51  Score=376.86  Aligned_cols=309  Identities=20%  Similarity=0.216  Sum_probs=263.7

Q ss_pred             cceeeeeecCCCCCccceeeccCCCCCCeEEEEEeeeccCcchHHhHhcCC--CC-CCCCCcccccccEEEEEeCCCCCC
Q 018067           11 KNAFGWAAKDTSGVLSPFHFSRRATGEKDVTFKVTHCGICHSDLHMIKNEW--GN-TIYPIVPGHEIVGVVTEVGSKVSK   87 (361)
Q Consensus        11 ~~~~~~~~~~~~~~l~~~~~~~p~~~~~evlV~v~~~~i~~~D~~~~~g~~--~~-~~~p~~lG~e~~G~Vv~vG~~v~~   87 (361)
                      |+++.+..++.|+.++++++|.|+|+++||||||+++|||++|++.+.|.+  .. ..+|.++|||++|+|+++|++|++
T Consensus         2 Mka~~~~~~g~~~~l~~~~~~~P~~~~~eVlVkv~a~gi~~~D~~~~~G~~~~~~~~~~p~i~G~e~~G~V~~vG~~v~~   81 (333)
T 1wly_A            2 VMAAVIHKKGGPDNFVWEEVKVGSPGPGQVRLRNTAIGVNFLDTYHRAGIPHPLVVGEPPIVVGFEAAAVVEEVGPGVTD   81 (333)
T ss_dssp             CEEEEESSCSSGGGEEEEECCCCCCCTTEEEEEEEEEEECHHHHHHHC----------CCEECCCEEEEEEEEECTTCCS
T ss_pred             cEEEEEcccCCcceeEEEeccCCCCCCCeEEEEEEEEecCHHHHHHhCCCcCCCCCCCCCccccceeEEEEEEECCCCCC
Confidence            788888777777789999999999999999999999999999999998865  21 457899999999999999999999


Q ss_pred             CCCCCEEEeccccCCCCCCcccccCCCCCCcchhcccccccCCCCcCCCcceeEEeecCCceEECCCCCCccc--ccccc
Q 018067           88 FKVGDKVGVGCMVGSCRSCDSCAIDLENYCPKVIMTYANKYHDGTITYGGYSDIMVADEHFVVRIPEGTPLDA--TAPLL  165 (361)
Q Consensus        88 ~~~GdrV~~~~~~~~c~~c~~c~~~~~~~c~~~~~~~~~~~~~~~~~~g~~a~~v~v~~~~~~~ip~~~~~~~--aa~l~  165 (361)
                      |++||||++.+                                  ...|+|+||+.++++.++++|+++++++  ||+++
T Consensus        82 ~~~GdrV~~~~----------------------------------~~~G~~aey~~v~~~~~~~iP~~~~~~~~~aa~l~  127 (333)
T 1wly_A           82 FTVGERVCTCL----------------------------------PPLGAYSQERLYPAEKLIKVPKDLDLDDVHLAGLM  127 (333)
T ss_dssp             CCTTCEEEECS----------------------------------SSCCCSBSEEEEEGGGCEECCTTCCCCHHHHHHHH
T ss_pred             CCCCCEEEEec----------------------------------CCCCcceeEEEecHHHcEeCCCCCChHHhCccchh
Confidence            99999997421                                  1269999999999999999999999999  99999


Q ss_pred             hhhhhhhhHhhhcCCCCCCCEEEEEcC-ChHHHHHHHHHHHcCCeEEEEeCCchhHHHHHHHcCCCEEecCCCHHH---H
Q 018067          166 CAGITVYSPLRFYGLDKPGMHVGVVGL-GGLGHVAVKFAKAMGVKVTVISTSPSKKSEAIERLGADSFLVSRDQDE---M  241 (361)
Q Consensus       166 ~~~~ta~~~l~~~~~~~~g~~vlV~Ga-g~vG~~a~~la~~~g~~vi~~~~~~~~~~~~~~~~g~~~vv~~~~~~~---~  241 (361)
                      +++.|||+++.+.+++++|++|||+|+ |++|++++|+++..|++|+++++++++++.+ +++|++.++++++.+.   +
T Consensus       128 ~~~~ta~~~l~~~~~~~~g~~vlV~Ga~ggiG~~~~~~a~~~G~~Vi~~~~~~~~~~~~-~~~g~~~~~d~~~~~~~~~i  206 (333)
T 1wly_A          128 LKGMTAQYLLHQTHKVKPGDYVLIHAAAGGMGHIMVPWARHLGATVIGTVSTEEKAETA-RKLGCHHTINYSTQDFAEVV  206 (333)
T ss_dssp             HHHHHHHHHHHTTSCCCTTCEEEETTTTSTTHHHHHHHHHHTTCEEEEEESSHHHHHHH-HHHTCSEEEETTTSCHHHHH
T ss_pred             hhHHHHHHHHHHhhCCCCCCEEEEECCccHHHHHHHHHHHHCCCEEEEEeCCHHHHHHH-HHcCCCEEEECCCHHHHHHH
Confidence            999999999987788999999999997 9999999999999999999999988776555 6799998888876443   3


Q ss_pred             HHhc--CCccEEEEcCCCcccHHHHHhccccCCEEEEecCCCC-CcccChH-HHHhCC--cEEEecccC---C----HHH
Q 018067          242 QAAM--GTMDGIIDTVSAVHPLMPLIGLLKSQGKLVLVGAPEK-PLELPAF-SLLMGR--KIVGGSMIG---G----MKE  308 (361)
Q Consensus       242 ~~~~--~g~d~vid~~g~~~~~~~~~~~l~~~G~~v~~g~~~~-~~~~~~~-~~~~~~--~~i~g~~~~---~----~~~  308 (361)
                      .+.+  .++|++||++|+.. +..++++++++|+++.+|...+ ...++.. .++.|+  +++.|++..   .    .++
T Consensus       207 ~~~~~~~~~d~vi~~~g~~~-~~~~~~~l~~~G~iv~~g~~~~~~~~~~~~~~~~~~~~~~~i~g~~~~~~~~~~~~~~~  285 (333)
T 1wly_A          207 REITGGKGVDVVYDSIGKDT-LQKSLDCLRPRGMCAAYGHASGVADPIRVVEDLGVRGSLFITRPALWHYMSNRSEIDEG  285 (333)
T ss_dssp             HHHHTTCCEEEEEECSCTTT-HHHHHHTEEEEEEEEECCCTTCCCCCCCHHHHTTTTTSCEEECCCGGGGSCSHHHHHHH
T ss_pred             HHHhCCCCCeEEEECCcHHH-HHHHHHhhccCCEEEEEecCCCCcCCCChhHhhhhcCCcEEEEEeehhhccCHHHHHHH
Confidence            3333  37999999999954 9999999999999999998653 3456666 677888  999987541   2    236


Q ss_pred             HHHHHHHHHcCCCceeE-EEEecccHHHHHHHHHcCCCceEEEEEeCC
Q 018067          309 TQEMIDFAAKHNIRADI-EVIPADYVNTALERLAKADVRYRFVIDVAN  355 (361)
Q Consensus       309 ~~~~~~ll~~~~~~~~~-~~~~l~~~~~a~~~~~~~~~~gkvvi~~~~  355 (361)
                      ++++++++.+|++++.+ ++|||+++++||+.+.+++..||+|+.+++
T Consensus       286 ~~~~~~l~~~g~l~~~i~~~~~l~~~~~A~~~~~~~~~~gKvvi~~~~  333 (333)
T 1wly_A          286 SKCLFDAVKAGVLHSSVAKTFPLREAAAAHKYMGGRQTIGSIVLLPQA  333 (333)
T ss_dssp             HHHHHHHHHTTSCCCCEEEEEEGGGHHHHHHHHHHCSCCSEEEEETTC
T ss_pred             HHHHHHHHHCCCcCCCcceEEeHHHHHHHHHHHHcCCCceEEEEEeCC
Confidence            88999999999999877 899999999999999998888999998753

>3nx4_A Putative oxidoreductase; csgid, structural genomics, center for struc genomics of infectious diseases, PSI, protein structure INI; HET: MSE NAP; 1.90A {Salmonella enterica subsp} PDB: 1o89_A 1o8c_A*

Probab=100.00  E-value=6.9e-52  Score=382.45  Aligned_cols=310  Identities=19%  Similarity=0.236  Sum_probs=266.7

Q ss_pred             cceeeeeecCCCCCccceeeccCCCCCCeEEEEEeeeccCcchHHhHhcCCCC-CCCCCcccccccEEEEEeCCCCCCCC
Q 018067           11 KNAFGWAAKDTSGVLSPFHFSRRATGEKDVTFKVTHCGICHSDLHMIKNEWGN-TIYPIVPGHEIVGVVTEVGSKVSKFK   89 (361)
Q Consensus        11 ~~~~~~~~~~~~~~l~~~~~~~p~~~~~evlV~v~~~~i~~~D~~~~~g~~~~-~~~p~~lG~e~~G~Vv~vG~~v~~~~   89 (361)
                      |+++.+..+++|+.++++++|.|+|+++||||||+++|||++|++.++|..+. ..+|.++|||++|+|+++|  +++|+
T Consensus         1 MkA~~~~~~g~~~~l~~~~~~~p~~~~~eVlVkv~a~gi~~~D~~~~~g~~~~~~~~p~v~G~E~~G~V~~~G--v~~~~   78 (324)
T 3nx4_A            1 MQALILEQQDGKTLASVQHLEESQLPAGDVTVDVHWSSLNYKDALAITGKGKIIRHFPMIPGIDFAGTVHASE--DPRFH   78 (324)
T ss_dssp             CEEEEEEESSSSEEEEEEECCGGGSCCCSEEEEEEEEEECHHHHHHHHTCTTCCCSSSBCCCSEEEEEEEEES--STTCC
T ss_pred             CceEEEecCCCCceeeEeecCCCCCCCCEEEEEEEEEeCCHHHHhhhcCCCCCCCCCCccccceeEEEEEEeC--CCCCC
Confidence            78899988888888999999999999999999999999999999999997664 4789999999999999998  57899


Q ss_pred             CCCEEEeccccCCCCCCcccccCCCCCCcchhcccccccCCCCcCCCcceeEEeecCCceEECCCCCCcccccccchhhh
Q 018067           90 VGDKVGVGCMVGSCRSCDSCAIDLENYCPKVIMTYANKYHDGTITYGGYSDIMVADEHFVVRIPEGTPLDATAPLLCAGI  169 (361)
Q Consensus        90 ~GdrV~~~~~~~~c~~c~~c~~~~~~~c~~~~~~~~~~~~~~~~~~g~~a~~v~v~~~~~~~ip~~~~~~~aa~l~~~~~  169 (361)
                      +||||++.+    |                         ..+....|+|+||+.+|+++++++|+++++++||++++.+.
T Consensus        79 vGdrV~~~~----~-------------------------~~g~~~~G~~aey~~v~~~~~~~iP~~~~~~~aa~l~~~~~  129 (324)
T 3nx4_A           79 AGQEVLLTG----W-------------------------GVGENHWGGLAERARVKGDWLVALPAGLSSRNAMIIGTAGF  129 (324)
T ss_dssp             TTCEEEEEC----T-------------------------TBTTTBCCSSBSEEEECGGGCEECCTTCCHHHHHHHHHHHH
T ss_pred             CCCEEEEcc----c-------------------------ccCCCCCCceeeEEecCHHHcEECCCCCCHHHHHHhhhHHH
Confidence            999998642    1                         01335689999999999999999999999999999999999


Q ss_pred             hhhhHhhhc--CCCCC--CCEEEEEcC-ChHHHHHHHHHHHcCCeEEEEeCCchhHHHHHHHcCCCEEecCCCHHHHHHh
Q 018067          170 TVYSPLRFY--GLDKP--GMHVGVVGL-GGLGHVAVKFAKAMGVKVTVISTSPSKKSEAIERLGADSFLVSRDQDEMQAA  244 (361)
Q Consensus       170 ta~~~l~~~--~~~~~--g~~vlV~Ga-g~vG~~a~~la~~~g~~vi~~~~~~~~~~~~~~~~g~~~vv~~~~~~~~~~~  244 (361)
                      |||++++..  ..+++  |+ |||+|+ |++|++++|+|+.+|++|+++++++++++.+ +++|+++++++++.+.++++
T Consensus       130 ta~~al~~~~~~~~~~~~g~-VlV~Ga~G~vG~~aiqla~~~Ga~Vi~~~~~~~~~~~~-~~lGa~~vi~~~~~~~~~~~  207 (324)
T 3nx4_A          130 TAMLCVMALEDAGIRPQDGE-VVVTGASGGVGSTAVALLHKLGYQVAAVSGRESTHGYL-KSLGANRILSRDEFAESRPL  207 (324)
T ss_dssp             HHHHHHHHHHHTTCCGGGCC-EEESSTTSHHHHHHHHHHHHTTCCEEEEESCGGGHHHH-HHHTCSEEEEGGGSSCCCSS
T ss_pred             HHHHHHHHhhhcccCCCCCe-EEEECCCcHHHHHHHHHHHHcCCEEEEEeCCHHHHHHH-HhcCCCEEEecCCHHHHHhh
Confidence            999888633  33565  45 999998 9999999999999999999999988876555 78999999998765443344


Q ss_pred             c-CCccEEEEcCCCcccHHHHHhccccCCEEEEecCCCCC-cccChHHHHhCCcEEEecccCC------HHHHHHHHHHH
Q 018067          245 M-GTMDGIIDTVSAVHPLMPLIGLLKSQGKLVLVGAPEKP-LELPAFSLLMGRKIVGGSMIGG------MKETQEMIDFA  316 (361)
Q Consensus       245 ~-~g~d~vid~~g~~~~~~~~~~~l~~~G~~v~~g~~~~~-~~~~~~~~~~~~~~i~g~~~~~------~~~~~~~~~ll  316 (361)
                      + +++|++||++|++. +..++++++++|+++.+|..... ..++...++.+++++.|+....      .+.++++++++
T Consensus       208 ~~~~~d~v~d~~g~~~-~~~~~~~l~~~G~iv~~G~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~l~  286 (324)
T 3nx4_A          208 EKQLWAGAIDTVGDKV-LAKVLAQMNYGGCVAACGLAGGFALPTTVMPFILRNVRLQGVDSVMTPPARRAEAWARLVKDL  286 (324)
T ss_dssp             CCCCEEEEEESSCHHH-HHHHHHTEEEEEEEEECCCTTCSEEEEESHHHHHHCCEEEECCSTTCCHHHHHHHHHHHHHHS
T ss_pred             cCCCccEEEECCCcHH-HHHHHHHHhcCCEEEEEecCCCCCCCCCHHHHhhcCeEEEEEeccccChHHHHHHHHHHHHHH
Confidence            4 37999999999885 99999999999999999987653 4666777888999999986533      25678888999


Q ss_pred             HcCCCceeEEEEecccHHHHHHHHHcCCCceEEEEEeC
Q 018067          317 AKHNIRADIEVIPADYVNTALERLAKADVRYRFVIDVA  354 (361)
Q Consensus       317 ~~~~~~~~~~~~~l~~~~~a~~~~~~~~~~gkvvi~~~  354 (361)
                      ++|++++..++|+|+++++||+.+++++..||+|++++
T Consensus       287 ~~g~l~~~~~~~~l~~~~~A~~~~~~~~~~gkvvv~~~  324 (324)
T 3nx4_A          287 PESFYAQAATEITLADAPKFADAIINNQVQGRTLVKIK  324 (324)
T ss_dssp             CHHHHHHHEEEEEGGGHHHHHHHHHTTCCCSEEEEECC
T ss_pred             HcCCCCCCceeEeHHHHHHHHHHHHhCCCCceEEEecC
Confidence            99998876789999999999999999999999999875

>3gqv_A Enoyl reductase; medium-chain reductase (MDR superfamily), rossmann fold, NAD binding, oxidoreductase; HET: NAP; 1.74A {Aspergillus terreus} PDB: 3b6z_A* 3b70_A*

Probab=100.00  E-value=1.8e-50  Score=379.40  Aligned_cols=320  Identities=14%  Similarity=0.119  Sum_probs=258.1

Q ss_pred             CCCCCcccceeeeeecCCCCCccce-eeccCCCCCCeEEEEEeeeccCcchHHhHhcCCCCCCCCCcccccccEEEEEeC
Q 018067            4 APEQEHPKNAFGWAAKDTSGVLSPF-HFSRRATGEKDVTFKVTHCGICHSDLHMIKNEWGNTIYPIVPGHEIVGVVTEVG   82 (361)
Q Consensus         4 ~~~~~~~~~~~~~~~~~~~~~l~~~-~~~~p~~~~~evlV~v~~~~i~~~D~~~~~g~~~~~~~p~~lG~e~~G~Vv~vG   82 (361)
                      ++.+|.+|+++.+   ..++.++++ ++|.|+|+++||||||++++||++|++.+.+.   ..+|.++|||++|+|+++|
T Consensus         5 tm~~p~~mkA~v~---~~~~~l~~~~~~~~p~~~~~eVlVkv~a~gi~~~D~~~~~g~---~~~p~v~G~e~~G~V~~vG   78 (371)
T 3gqv_A            5 PFIPPPQQTALTV---NDHDEVTVWNAAPCPMLPRDQVYVRVEAVAINPSDTSMRGQF---ATPWAFLGTDYAGTVVAVG   78 (371)
T ss_dssp             CCCCCSCEEEEEE---CTTSCEEEEEEECCCCCCTTSEEEEEEEEECCGGGGC--------CCTTSCCCSEEEEEEEEEC
T ss_pred             CCCCchhceeEEE---cCCCceEEeccCCCCCCCCCEEEEEEEEEEcCHHHHHHhhcC---CCCCccCccccEEEEEEeC
Confidence            4445556666665   356779998 99999999999999999999999999988763   3568999999999999999


Q ss_pred             CCCCCCCCCCEEEeccccCCCCCCcccccCCCCCCcchhcccccccCCCCcCCCcceeEEeecCCceEECCCCCCccccc
Q 018067           83 SKVSKFKVGDKVGVGCMVGSCRSCDSCAIDLENYCPKVIMTYANKYHDGTITYGGYSDIMVADEHFVVRIPEGTPLDATA  162 (361)
Q Consensus        83 ~~v~~~~~GdrV~~~~~~~~c~~c~~c~~~~~~~c~~~~~~~~~~~~~~~~~~g~~a~~v~v~~~~~~~ip~~~~~~~aa  162 (361)
                      ++|++|++||||+.        .|.+|..                   +....|+|+||+++++++++++|+++++++||
T Consensus        79 ~~v~~~~~GdrV~~--------~~~~~~~-------------------~~~~~G~~aey~~v~~~~~~~~P~~~~~~~aa  131 (371)
T 3gqv_A           79 SDVTHIQVGDRVYG--------AQNEMCP-------------------RTPDQGAFSQYTVTRGRVWAKIPKGLSFEQAA  131 (371)
T ss_dssp             TTCCSCCTTCEEEE--------ECCTTCT-------------------TCTTCCSSBSEEECCTTCEEECCTTCCHHHHH
T ss_pred             CCCCCCCCCCEEEE--------eccCCCC-------------------CCCCCCcCcCeEEEchhheEECCCCCCHHHHh
Confidence            99999999999963        3444543                   22468999999999999999999999999999


Q ss_pred             ccchhhhhhhhHhhhc-CCC-----------CCCCEEEEEcC-ChHHHHHHHHHHHcCCeEEEEeCCchhHHHHHHHcCC
Q 018067          163 PLLCAGITVYSPLRFY-GLD-----------KPGMHVGVVGL-GGLGHVAVKFAKAMGVKVTVISTSPSKKSEAIERLGA  229 (361)
Q Consensus       163 ~l~~~~~ta~~~l~~~-~~~-----------~~g~~vlV~Ga-g~vG~~a~~la~~~g~~vi~~~~~~~~~~~~~~~~g~  229 (361)
                      .+++++.|||+++.+. .++           ++|++|||+|+ |++|++++|+|+.+|++|++++ +++++ ++++++|+
T Consensus       132 ~~~~~~~ta~~~l~~~~~~~~~~~~~~~~~~~~g~~VlV~Ga~G~vG~~a~qla~~~Ga~Vi~~~-~~~~~-~~~~~lGa  209 (371)
T 3gqv_A          132 ALPAGISTAGLAMKLLGLPLPSPSADQPPTHSKPVYVLVYGGSTATATVTMQMLRLSGYIPIATC-SPHNF-DLAKSRGA  209 (371)
T ss_dssp             TSHHHHHHHHHHHHHHTCCCCCSSCSSCCCCSSCCEEEEESTTSHHHHHHHHHHHHTTCEEEEEE-CGGGH-HHHHHTTC
T ss_pred             hhhhhHHHHHHHHHhhccCCCCCccccccccCCCcEEEEECCCcHHHHHHHHHHHHCCCEEEEEe-CHHHH-HHHHHcCC
Confidence            9999999999999776 443           89999999998 9999999999999999999886 55554 56689999


Q ss_pred             CEEecCCCHHH---HHHhcC-CccEEEEcCCCcccHHHHHhcc-ccCCEEEEecCCCC------Ccc---cChHHHHhCC
Q 018067          230 DSFLVSRDQDE---MQAAMG-TMDGIIDTVSAVHPLMPLIGLL-KSQGKLVLVGAPEK------PLE---LPAFSLLMGR  295 (361)
Q Consensus       230 ~~vv~~~~~~~---~~~~~~-g~d~vid~~g~~~~~~~~~~~l-~~~G~~v~~g~~~~------~~~---~~~~~~~~~~  295 (361)
                      ++++++++++.   +.++++ ++|++||++|++.++..+++++ +++|+++.+|....      ...   .....++.|+
T Consensus       210 ~~vi~~~~~~~~~~v~~~t~g~~d~v~d~~g~~~~~~~~~~~l~~~~G~iv~~g~~~~~~~~~~~~~~~~~~~~~~~~k~  289 (371)
T 3gqv_A          210 EEVFDYRAPNLAQTIRTYTKNNLRYALDCITNVESTTFCFAAIGRAGGHYVSLNPFPEHAATRKMVTTDWTLGPTIFGEG  289 (371)
T ss_dssp             SEEEETTSTTHHHHHHHHTTTCCCEEEESSCSHHHHHHHHHHSCTTCEEEEESSCCCC---CCSCEEEEECCGGGGGTSC
T ss_pred             cEEEECCCchHHHHHHHHccCCccEEEECCCchHHHHHHHHHhhcCCCEEEEEecCccccccccccceeeeeeeeecccc
Confidence            99999987654   444443 6999999999977789999999 69999999996442      121   1234567789


Q ss_pred             cEEEecccCC--H-------HHHHHHHHHHHcCCCceeE---EEEecccHHHHHHHHHcCCCce-EEEEEeCCccc
Q 018067          296 KIVGGSMIGG--M-------KETQEMIDFAAKHNIRADI---EVIPADYVNTALERLAKADVRY-RFVIDVANTMK  358 (361)
Q Consensus       296 ~~i~g~~~~~--~-------~~~~~~~~ll~~~~~~~~~---~~~~l~~~~~a~~~~~~~~~~g-kvvi~~~~~~~  358 (361)
                      +++.|++...  .       +.++++++++++|++++..   +.|+|+++++||+.+.+++..| |+|+++++..+
T Consensus       290 ~~~~g~~~~~~~~~~~~~~~~~~~~~~~l~~~g~l~~~~~~~~~~~l~~~~~A~~~l~~g~~~Gkkvvv~~~~~~~  365 (371)
T 3gqv_A          290 STWPAPYGRPGSEEERQFGEDLWRIAGQLVEDGRLVHHPLRVVQGGFDHIKQGMELVRKGELSGEKLVVRLEGPLE  365 (371)
T ss_dssp             BSCSTTTCBCCCHHHHHHHHHHHHHHHHHHHTTSSCCCCEEEEEECHHHHHHHHHHHHTTCCSSCEEEEEECCC--
T ss_pred             ccccccccccccHHHHHHHHHHHHHHHHHHHCCeeeCCcCeecCCcHHHHHHHHHHHHcCCCceEEEEEEeCCccc
Confidence            9998875432  1       2345888999999998764   5699999999999999998887 78888877653

>3gaz_A Alcohol dehydrogenase superfamily protein; oxidoreductase, PSI-II, alcohol dehydrogenase superf structural genomics; 1.96A {Novosphingobium aromaticivorans}

Probab=100.00  E-value=1.2e-50  Score=376.76  Aligned_cols=309  Identities=18%  Similarity=0.181  Sum_probs=260.2

Q ss_pred             CcccceeeeeecCCCCCccceeeccCCCCCCeEEEEEeeeccCcchHHhHhcCCC--CCCCCCcccccccEEEEEeCCCC
Q 018067            8 EHPKNAFGWAAKDTSGVLSPFHFSRRATGEKDVTFKVTHCGICHSDLHMIKNEWG--NTIYPIVPGHEIVGVVTEVGSKV   85 (361)
Q Consensus         8 ~~~~~~~~~~~~~~~~~l~~~~~~~p~~~~~evlV~v~~~~i~~~D~~~~~g~~~--~~~~p~~lG~e~~G~Vv~vG~~v   85 (361)
                      +.+|+++.+..++++  ++++++|.|+|+++||||||++++||++|++.+.|..+  ...+|.++|||++|+|+++|+++
T Consensus         5 ~~~mka~~~~~~~~~--l~~~~~~~P~~~~~eVlVkv~a~gi~~~D~~~~~g~~~~~~~~~P~v~G~E~~G~V~~vG~~v   82 (343)
T 3gaz_A            5 TPTMIAAVVEEANGP--FVLRKLARPQPAPGQVLVQIEASGTNPLDAKIRAGEAPHAQQPLPAILGMDLAGTVVAVGPEV   82 (343)
T ss_dssp             -CEEEEEEECSTTCC--EEEEEEECCCCCTTEEEEEEEEEECCHHHHHHHTTCCGGGCCCSSBCCCCEEEEEEEEECTTC
T ss_pred             chhheEEEEecCCCc--eEEEeccCCCCCCCEEEEEEEEEEeCHhhHHHhCCCCCCCCCCCCcccCcceEEEEEEECCCC
Confidence            346777777654444  88999999999999999999999999999999988653  24789999999999999999999


Q ss_pred             CCCCCCCEEEeccccCCCCCCcccccCCCCCCcchhcccccccCCCCcCCCcceeEEeecCCceEECCCCCCcccccccc
Q 018067           86 SKFKVGDKVGVGCMVGSCRSCDSCAIDLENYCPKVIMTYANKYHDGTITYGGYSDIMVADEHFVVRIPEGTPLDATAPLL  165 (361)
Q Consensus        86 ~~~~~GdrV~~~~~~~~c~~c~~c~~~~~~~c~~~~~~~~~~~~~~~~~~g~~a~~v~v~~~~~~~ip~~~~~~~aa~l~  165 (361)
                      ++|++||||+....            +                  ....+|+|+||+.++++.++++|+++++++||.++
T Consensus        83 ~~~~vGdrV~~~~~------------g------------------~~~~~G~~aey~~v~~~~~~~~P~~~~~~~aa~l~  132 (343)
T 3gaz_A           83 DSFRVGDAVFGLTG------------G------------------VGGLQGTHAQFAAVDARLLASKPAALTMRQASVLP  132 (343)
T ss_dssp             CSCCTTCEEEEECC------------S------------------STTCCCSSBSEEEEEGGGEEECCTTSCHHHHHTSH
T ss_pred             CCCCCCCEEEEEeC------------C------------------CCCCCcceeeEEEecHHHeeeCCCCCCHHHHHHhh
Confidence            99999999974210            0                  01257999999999999999999999999999999


Q ss_pred             hhhhhhhhHhhhcCCCCCCCEEEEEcC-ChHHHHHHHHHHHcCCeEEEEeCCchhHHHHHHHcCCCEEecCCCH---HHH
Q 018067          166 CAGITVYSPLRFYGLDKPGMHVGVVGL-GGLGHVAVKFAKAMGVKVTVISTSPSKKSEAIERLGADSFLVSRDQ---DEM  241 (361)
Q Consensus       166 ~~~~ta~~~l~~~~~~~~g~~vlV~Ga-g~vG~~a~~la~~~g~~vi~~~~~~~~~~~~~~~~g~~~vv~~~~~---~~~  241 (361)
                      +++.|||+++.+.+++++|++|||+|+ |++|++++|+|+..|++|+++ .++++++ +++++|++. ++ ++.   +.+
T Consensus       133 ~~~~ta~~~l~~~~~~~~g~~VlV~Ga~g~iG~~~~q~a~~~Ga~Vi~~-~~~~~~~-~~~~lGa~~-i~-~~~~~~~~~  208 (343)
T 3gaz_A          133 LVFITAWEGLVDRAQVQDGQTVLIQGGGGGVGHVAIQIALARGARVFAT-ARGSDLE-YVRDLGATP-ID-ASREPEDYA  208 (343)
T ss_dssp             HHHHHHHHHHTTTTCCCTTCEEEEETTTSHHHHHHHHHHHHTTCEEEEE-ECHHHHH-HHHHHTSEE-EE-TTSCHHHHH
T ss_pred             hhHHHHHHHHHHhcCCCCCCEEEEecCCCHHHHHHHHHHHHCCCEEEEE-eCHHHHH-HHHHcCCCE-ec-cCCCHHHHH
Confidence            999999999977788999999999995 999999999999999999988 6666654 558899988 66 332   344


Q ss_pred             HHhcC--CccEEEEcCCCcccHHHHHhccccCCEEEEecCCCCCcccChHHHHhCCcEEEecccCCH-----------HH
Q 018067          242 QAAMG--TMDGIIDTVSAVHPLMPLIGLLKSQGKLVLVGAPEKPLELPAFSLLMGRKIVGGSMIGGM-----------KE  308 (361)
Q Consensus       242 ~~~~~--g~d~vid~~g~~~~~~~~~~~l~~~G~~v~~g~~~~~~~~~~~~~~~~~~~i~g~~~~~~-----------~~  308 (361)
                      .+.++  ++|++||++|+.. +..++++++++|+++.+|...   .++...+..+++++.+++....           ++
T Consensus       209 ~~~~~~~g~D~vid~~g~~~-~~~~~~~l~~~G~iv~~g~~~---~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~  284 (343)
T 3gaz_A          209 AEHTAGQGFDLVYDTLGGPV-LDASFSAVKRFGHVVSCLGWG---THKLAPLSFKQATYSGVFTLHTLLANEGLAHFGEM  284 (343)
T ss_dssp             HHHHTTSCEEEEEESSCTHH-HHHHHHHEEEEEEEEESCCCS---CCCCHHHHHTTCEEEECCTTHHHHHTCSHHHHHHH
T ss_pred             HHHhcCCCceEEEECCCcHH-HHHHHHHHhcCCeEEEEcccC---ccccchhhhcCcEEEEEEeccchhcccchHHHHHH
Confidence            44443  7999999999865 999999999999999998764   3455667789999999876432           67


Q ss_pred             HHHHHHHHHcCCCceeE--EEEecccHHHHHHHHHcCCC----ceEEEEEeCCc
Q 018067          309 TQEMIDFAAKHNIRADI--EVIPADYVNTALERLAKADV----RYRFVIDVANT  356 (361)
Q Consensus       309 ~~~~~~ll~~~~~~~~~--~~~~l~~~~~a~~~~~~~~~----~gkvvi~~~~~  356 (361)
                      ++++++++++|++++.+  ++|+|+++++||+.+++++.    +||++++.+..
T Consensus       285 ~~~~~~l~~~g~l~~~i~~~~~~l~~~~~A~~~~~~~~~~Gr~~GK~v~~~~~~  338 (343)
T 3gaz_A          285 LREADALVQTGKLAPRLDPRTFSIAEIGSAYDAVLGRNDVPRQRGKIAITVEGH  338 (343)
T ss_dssp             HHHHHHHHHTTCCCCCBCSCCEETTCHHHHHHHHHTCTTCCCCSSBCEEECC--
T ss_pred             HHHHHHHHHCCCcccCccCcEecHHHHHHHHHHHHcCCCcccccceEEEEeccc
Confidence            89999999999999876  49999999999999999876    48999998764

>1gu7_A Enoyl-[acyl-carrier-protein] reductase [NADPH, B-specific] 1,mitochondrial; oxidoreductase, thioester reduction, fatty acids; 1.70A {Candida tropicalis} SCOP: b.35.1.2 c.2.1.1 PDB: 1guf_A* 1n9g_B* 1n9g_A* 1gyr_A 1h0k_A

Probab=100.00  E-value=2.4e-50  Score=378.01  Aligned_cols=309  Identities=16%  Similarity=0.214  Sum_probs=261.0

Q ss_pred             ccceeeeeecCCC-CCccceeeccCCCC--CCeEEEEEeeeccCcchHHhHhcCCCC-CCCC---------CcccccccE
Q 018067           10 PKNAFGWAAKDTS-GVLSPFHFSRRATG--EKDVTFKVTHCGICHSDLHMIKNEWGN-TIYP---------IVPGHEIVG   76 (361)
Q Consensus        10 ~~~~~~~~~~~~~-~~l~~~~~~~p~~~--~~evlV~v~~~~i~~~D~~~~~g~~~~-~~~p---------~~lG~e~~G   76 (361)
                      +|+++.+..++.| +.++++++|.|+|+  ++||||||+++|||++|++.++|.++. ..+|         .++|||++|
T Consensus         3 ~mka~~~~~~g~~~~~l~~~~~~~P~p~~~~~eVlVkv~a~gi~~~D~~~~~g~~~~~~~~P~~~~~~~p~~i~G~E~~G   82 (364)
T 1gu7_A            3 TAQAVLYTQHGEPKDVLFTQSFEIDDDNLAPNEVIVKTLGSPVNPSDINQIQGVYPSKPAKTTGFGTTEPAAPCGNEGLF   82 (364)
T ss_dssp             EEEEEEESSCSCHHHHCEEEEEEECTTSCCTTEEEEEEEEEEECHHHHHHHHTCSSCCCCCBSTTCCSSCBEECCSCCEE
T ss_pred             eEEEEEeccCCCchheeEEeeccCCCCCCCCCeEEEEEEeccCCHHHHHHhcCCCCCCCCCCccccccCcccccCceeEE
Confidence            6777777655443 34888889888877  999999999999999999999986653 2456         899999999


Q ss_pred             EEEEeCCCCCCCCCCCEEEeccccCCCCCCcccccCCCCCCcchhcccccccCCCCcCCCcceeEEeecCCceEECCC--
Q 018067           77 VVTEVGSKVSKFKVGDKVGVGCMVGSCRSCDSCAIDLENYCPKVIMTYANKYHDGTITYGGYSDIMVADEHFVVRIPE--  154 (361)
Q Consensus        77 ~Vv~vG~~v~~~~~GdrV~~~~~~~~c~~c~~c~~~~~~~c~~~~~~~~~~~~~~~~~~g~~a~~v~v~~~~~~~ip~--  154 (361)
                      +|+++|++|++|++||||++.+                                  ...|+|+||++++++.++++|+  
T Consensus        83 ~V~~vG~~v~~~~vGdrV~~~~----------------------------------~~~G~~aey~~v~~~~~~~~P~~~  128 (364)
T 1gu7_A           83 EVIKVGSNVSSLEAGDWVIPSH----------------------------------VNFGTWRTHALGNDDDFIKLPNPA  128 (364)
T ss_dssp             EEEEECTTCCSCCTTCEEEESS----------------------------------SCCCCSBSEEEEEGGGEEEECCHH
T ss_pred             EEEEeCCCCCcCCCCCEEEecC----------------------------------CCCCcchheEecCHHHeEEcCCcc
Confidence            9999999999999999998532                                  2469999999999999999998  


Q ss_pred             ---------CCCcccccccchhhhhhhhHhhhcCCCCCC-CEEEEEcC-ChHHHHHHHHHHHcCCeEEEEeCCchh---H
Q 018067          155 ---------GTPLDATAPLLCAGITVYSPLRFYGLDKPG-MHVGVVGL-GGLGHVAVKFAKAMGVKVTVISTSPSK---K  220 (361)
Q Consensus       155 ---------~~~~~~aa~l~~~~~ta~~~l~~~~~~~~g-~~vlV~Ga-g~vG~~a~~la~~~g~~vi~~~~~~~~---~  220 (361)
                               ++++++||++++++.|||+++.+.+++++| ++|||+|+ |++|++++|+|+.+|++|++++++.++   +
T Consensus       129 ~~~~~~~~~~~~~~~aa~l~~~~~ta~~~l~~~~~~~~g~~~VlV~Ga~G~vG~~aiqlak~~Ga~vi~~~~~~~~~~~~  208 (364)
T 1gu7_A          129 QSKANGKPNGLTINQGATISVNPLTAYLMLTHYVKLTPGKDWFIQNGGTSAVGKYASQIGKLLNFNSISVIRDRPNLDEV  208 (364)
T ss_dssp             HHHHTTCSCCCCHHHHHTCTTHHHHHHHHHHSSSCCCTTTCEEEESCTTSHHHHHHHHHHHHHTCEEEEEECCCTTHHHH
T ss_pred             ccccccccCCCCHHHHhhccccHHHHHHHHHHhhccCCCCcEEEECCCCcHHHHHHHHHHHHCCCEEEEEecCccccHHH
Confidence                     899999999999999999999988789999 99999998 999999999999999999999876654   2


Q ss_pred             HHHHHHcCCCEEecCCC---HH---HHHHhc----CCccEEEEcCCCcccHHHHHhccccCCEEEEecCCCC-CcccChH
Q 018067          221 SEAIERLGADSFLVSRD---QD---EMQAAM----GTMDGIIDTVSAVHPLMPLIGLLKSQGKLVLVGAPEK-PLELPAF  289 (361)
Q Consensus       221 ~~~~~~~g~~~vv~~~~---~~---~~~~~~----~g~d~vid~~g~~~~~~~~~~~l~~~G~~v~~g~~~~-~~~~~~~  289 (361)
                      ...++++|+++++++++   .+   .+.+++    .++|+|||++|+.. ...++++++++|+++.+|.... ...++..
T Consensus       209 ~~~~~~lGa~~vi~~~~~~~~~~~~~i~~~t~~~~~g~Dvvid~~G~~~-~~~~~~~l~~~G~~v~~g~~~~~~~~~~~~  287 (364)
T 1gu7_A          209 VASLKELGATQVITEDQNNSREFGPTIKEWIKQSGGEAKLALNCVGGKS-STGIARKLNNNGLMLTYGGMSFQPVTIPTS  287 (364)
T ss_dssp             HHHHHHHTCSEEEEHHHHHCGGGHHHHHHHHHHHTCCEEEEEESSCHHH-HHHHHHTSCTTCEEEECCCCSSCCEEECHH
T ss_pred             HHHHHhcCCeEEEecCccchHHHHHHHHHHhhccCCCceEEEECCCchh-HHHHHHHhccCCEEEEecCCCCCCcccCHH
Confidence            34458999999998764   33   444544    37999999999988 5588999999999999997653 4567777


Q ss_pred             HHHhCCcEEEecccCC---------HHHHHHHHHHHHcCCCceeE-EEEecc---cHHHHHHHHHcCCCceEEEEEe
Q 018067          290 SLLMGRKIVGGSMIGG---------MKETQEMIDFAAKHNIRADI-EVIPAD---YVNTALERLAKADVRYRFVIDV  353 (361)
Q Consensus       290 ~~~~~~~~i~g~~~~~---------~~~~~~~~~ll~~~~~~~~~-~~~~l~---~~~~a~~~~~~~~~~gkvvi~~  353 (361)
                      .++.+++++.|++...         .++++++++++++|++++.+ .+++++   ++++||+.+.+++..||+|+.+
T Consensus       288 ~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~l~~~g~l~~~~~~~~~~~~l~~~~~A~~~~~~~~~~gKvvv~~  364 (364)
T 1gu7_A          288 LYIFKNFTSAGFWVTELLKNNKELKTSTLNQIIAWYEEGKLTDAKSIETLYDGTKPLHELYQDGVANSKDGKQLITY  364 (364)
T ss_dssp             HHHHSCCEEEECCHHHHHTTCHHHHHHHHHHHHHHHHHTCCCCCCCEEEECCSSSCHHHHHHHHHHTGGGSCEEEEC
T ss_pred             HHhhcCcEEEEEchhHhcccCHHHHHHHHHHHHHHHHcCCcccccceEEecCchhhHHHHHHHHHhCCCCceEEEeC
Confidence            7888999999987643         35789999999999999865 667664   9999999999888789999975

>1qor_A Quinone oxidoreductase; HET: NAP; 2.20A {Escherichia coli} SCOP: b.35.1.2 c.2.1.1

Probab=100.00  E-value=1.1e-49  Score=368.08  Aligned_cols=307  Identities=21%  Similarity=0.258  Sum_probs=263.2

Q ss_pred             cceeeeeecCCCCCccceeeccCCCCCCeEEEEEeeeccCcchHHhHhcCCCCCCCCCcccccccEEEEEeCCCCCCCCC
Q 018067           11 KNAFGWAAKDTSGVLSPFHFSRRATGEKDVTFKVTHCGICHSDLHMIKNEWGNTIYPIVPGHEIVGVVTEVGSKVSKFKV   90 (361)
Q Consensus        11 ~~~~~~~~~~~~~~l~~~~~~~p~~~~~evlV~v~~~~i~~~D~~~~~g~~~~~~~p~~lG~e~~G~Vv~vG~~v~~~~~   90 (361)
                      |+++.+..++.|+.++++++|.|+|+++||||||+++|||++|++.+.|.++...+|.++|||++|+|+++|++|++|++
T Consensus         2 Mka~~~~~~g~~~~l~~~~~~~p~~~~~eVlVkv~a~gi~~~D~~~~~g~~~~~~~p~v~G~E~~G~V~~vG~~v~~~~~   81 (327)
T 1qor_A            2 ATRIEFHKHGGPEVLQAVEFTPADPAENEIQVENKAIGINFIDTYIRSGLYPPPSLPSGLGTEAAGIVSKVGSGVKHIKA   81 (327)
T ss_dssp             CEEEEBSSCCSGGGCEEEECCCCCCCTTEEEEEEEEEECCHHHHHHHHTSSCCSSSSBCCCSCEEEEEEEECTTCCSCCT
T ss_pred             cEEEEEcCCCChhheEEeccCCCCCCCCEEEEEEEEEecCHHHHHHhCCCCCCCCCCCCCCceeEEEEEEECCCCCCCCC
Confidence            78888877666778889999999999999999999999999999999987755568999999999999999999999999


Q ss_pred             CCEEEeccccCCCCCCcccccCCCCCCcchhcccccccCCCCcCCCcceeEEeecCCceEECCCCCCcccccccchhhhh
Q 018067           91 GDKVGVGCMVGSCRSCDSCAIDLENYCPKVIMTYANKYHDGTITYGGYSDIMVADEHFVVRIPEGTPLDATAPLLCAGIT  170 (361)
Q Consensus        91 GdrV~~~~~~~~c~~c~~c~~~~~~~c~~~~~~~~~~~~~~~~~~g~~a~~v~v~~~~~~~ip~~~~~~~aa~l~~~~~t  170 (361)
                      ||||.. +                                + ...|+|+||+.++++.++++|+++++++||++++++.|
T Consensus        82 GdrV~~-~--------------------------------g-~~~G~~aey~~v~~~~~~~iP~~l~~~~aa~l~~~~~t  127 (327)
T 1qor_A           82 GDRVVY-A--------------------------------Q-SALGAYSSVHNIIADKAAILPAAISFEQAAASFLKGLT  127 (327)
T ss_dssp             TCEEEE-S--------------------------------C-CSSCCSBSEEEEEGGGEEECCTTSCHHHHHHHHHHHHH
T ss_pred             CCEEEE-C--------------------------------C-CCCceeeeEEEecHHHcEECCCCCCHHHHHHhhhHHHH
Confidence            999942 1                                0 13599999999999999999999999999999999999


Q ss_pred             hhhHhhhcCCCCCCCEEEEEcC-ChHHHHHHHHHHHcCCeEEEEeCCchhHHHHHHHcCCCEEecCCCHHH---HHHhc-
Q 018067          171 VYSPLRFYGLDKPGMHVGVVGL-GGLGHVAVKFAKAMGVKVTVISTSPSKKSEAIERLGADSFLVSRDQDE---MQAAM-  245 (361)
Q Consensus       171 a~~~l~~~~~~~~g~~vlV~Ga-g~vG~~a~~la~~~g~~vi~~~~~~~~~~~~~~~~g~~~vv~~~~~~~---~~~~~-  245 (361)
                      ||+++.+.+++++|++|||+|+ |++|++++|+++..|++|+++++++++.+.+ +++|++.++++.+.+.   +.+.+ 
T Consensus       128 a~~al~~~~~~~~g~~vlV~Ga~ggiG~~~~~~a~~~G~~V~~~~~~~~~~~~~-~~~g~~~~~~~~~~~~~~~~~~~~~  206 (327)
T 1qor_A          128 VYYLLRKTYEIKPDEQFLFHAAAGGVGLIACQWAKALGAKLIGTVGTAQKAQSA-LKAGAWQVINYREEDLVERLKEITG  206 (327)
T ss_dssp             HHHHHHTTSCCCTTCEEEESSTTBHHHHHHHHHHHHHTCEEEEEESSHHHHHHH-HHHTCSEEEETTTSCHHHHHHHHTT
T ss_pred             HHHHHHHhhCCCCCCEEEEECCCCHHHHHHHHHHHHcCCEEEEEeCCHHHHHHH-HHcCCCEEEECCCccHHHHHHHHhC
Confidence            9999987778999999999995 9999999999999999999999987776555 6799998888776543   33333 


Q ss_pred             -CCccEEEEcCCCcccHHHHHhccccCCEEEEecCCCCC-cccChHHHHhC-CcEEEeccc----CC----HHHHHHHHH
Q 018067          246 -GTMDGIIDTVSAVHPLMPLIGLLKSQGKLVLVGAPEKP-LELPAFSLLMG-RKIVGGSMI----GG----MKETQEMID  314 (361)
Q Consensus       246 -~g~d~vid~~g~~~~~~~~~~~l~~~G~~v~~g~~~~~-~~~~~~~~~~~-~~~i~g~~~----~~----~~~~~~~~~  314 (361)
                       .++|++||++|. ..+..++++++++|+++.+|...+. ..++...++.+ ++++.+...    .+    .+.++++++
T Consensus       207 ~~~~D~vi~~~g~-~~~~~~~~~l~~~G~iv~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  285 (327)
T 1qor_A          207 GKKVRVVYDSVGR-DTWERSLDCLQRRGLMVSFGNSSGAVTGVNLGILNQKGSLYVTRPSLQGYITTREELTEASNELFS  285 (327)
T ss_dssp             TCCEEEEEECSCG-GGHHHHHHTEEEEEEEEECCCTTCCCCCBCTHHHHHTTSCEEECCCHHHHCCSHHHHHHHHHHHHH
T ss_pred             CCCceEEEECCch-HHHHHHHHHhcCCCEEEEEecCCCCCCccCHHHHhhccceEEEccchhhhcCCHHHHHHHHHHHHH
Confidence             279999999994 4599999999999999999986543 45666677777 888876432    12    345889999


Q ss_pred             HHHcCCCceeE---EEEecccHHHHHHHHHcCCCceEEEEEe
Q 018067          315 FAAKHNIRADI---EVIPADYVNTALERLAKADVRYRFVIDV  353 (361)
Q Consensus       315 ll~~~~~~~~~---~~~~l~~~~~a~~~~~~~~~~gkvvi~~  353 (361)
                      ++++|++++.+   ++|+|+++++||+.+++++..||+|+.+
T Consensus       286 l~~~g~l~~~i~~~~~~~l~~~~~A~~~~~~~~~~gKvvl~~  327 (327)
T 1qor_A          286 LIASGVIKVDVAEQQKYPLKDAQRAHEILESRATQGSSLLIP  327 (327)
T ss_dssp             HHHTTSSCCCCCGGGEEEGGGHHHHHHHHHTTCCCBCCEEEC
T ss_pred             HHHCCCcccccccCcEEcHHHHHHHHHHHHhCCCCceEEEeC
Confidence            99999999765   5999999999999999988889999864

>2vn8_A Reticulon-4-interacting protein 1; mitochondrion, transit peptide, receptor inhibitor; HET: NDP CIT; 2.1A {Homo sapiens}

Probab=100.00  E-value=8.8e-49  Score=368.56  Aligned_cols=314  Identities=21%  Similarity=0.249  Sum_probs=258.4

Q ss_pred             CCCcccceeeeeecCCCCCccc-eeeccCCC-CCCeEEEEEeeeccCcchHHhHhcCCC---------------CCCCCC
Q 018067            6 EQEHPKNAFGWAAKDTSGVLSP-FHFSRRAT-GEKDVTFKVTHCGICHSDLHMIKNEWG---------------NTIYPI   68 (361)
Q Consensus         6 ~~~~~~~~~~~~~~~~~~~l~~-~~~~~p~~-~~~evlV~v~~~~i~~~D~~~~~g~~~---------------~~~~p~   68 (361)
                      .++.+|+++.+..++.|..+++ +++|.|.+ +++||||||+++|||++|++.+.|..+               ...+|.
T Consensus        17 ~~~~~mka~~~~~~g~~~~l~~~~~~p~P~~~~~~eVlVkv~a~gi~~~D~~~~~G~~~~~~~~~~~~~~~~~~~~~~P~   96 (375)
T 2vn8_A           17 NLYFQSMAWVIDKYGKNEVLRFTQNMMMPIIHYPNEVIVKVHAASVNPIDVNMRSGYGATALNMKRDPLHVKIKGEEFPL   96 (375)
T ss_dssp             -CCCCEEEEEBSSCCSGGGCEEEEEECCCCCCSTTEEEEEEEEEEECHHHHHHHTTTTHHHHHHHHCTTCCSCTTTTCSB
T ss_pred             ccCccceeEEeccCCCccceEEeccccCCCCCCCCEEEEEEEEEEcCHHHHHHhccCccccccccccccccccccccCCc
Confidence            3556788888777666777888 89999985 999999999999999999999987531               123789


Q ss_pred             cccccccEEEEEeCCCCCCCCCCCEEEeccccCCCCCCcccccCCCCCCcchhcccccccCCCCcCCCcceeEEeecCCc
Q 018067           69 VPGHEIVGVVTEVGSKVSKFKVGDKVGVGCMVGSCRSCDSCAIDLENYCPKVIMTYANKYHDGTITYGGYSDIMVADEHF  148 (361)
Q Consensus        69 ~lG~e~~G~Vv~vG~~v~~~~~GdrV~~~~~~~~c~~c~~c~~~~~~~c~~~~~~~~~~~~~~~~~~g~~a~~v~v~~~~  148 (361)
                      ++|||++|+|+++|++|++|++||||++.+.                                ....|+|+||+.++++.
T Consensus        97 v~G~E~~G~V~~vG~~V~~~~vGDrV~~~~~--------------------------------~~~~G~~aey~~v~~~~  144 (375)
T 2vn8_A           97 TLGRDVSGVVMECGLDVKYFKPGDEVWAAVP--------------------------------PWKQGTLSEFVVVSGNE  144 (375)
T ss_dssp             CCCCEEEEEEEEECTTCCSCCTTCEEEEECC--------------------------------TTSCCSSBSEEEEEGGG
T ss_pred             ccceeeeEEEEEeCCCCCCCCCCCEEEEecC--------------------------------CCCCccceeEEEEcHHH
Confidence            9999999999999999999999999986431                                13479999999999999


Q ss_pred             eEECCCCCCcccccccchhhhhhhhHhhhcCC----CCCCCEEEEEcC-ChHHHHHHHHHHHcCCeEEEEeCCchhHHHH
Q 018067          149 VVRIPEGTPLDATAPLLCAGITVYSPLRFYGL----DKPGMHVGVVGL-GGLGHVAVKFAKAMGVKVTVISTSPSKKSEA  223 (361)
Q Consensus       149 ~~~ip~~~~~~~aa~l~~~~~ta~~~l~~~~~----~~~g~~vlV~Ga-g~vG~~a~~la~~~g~~vi~~~~~~~~~~~~  223 (361)
                      ++++|+++++++||++++++.|||+++.+.++    +++|++|||+|+ |++|++++|+|+..|++|++++ +++++ ++
T Consensus       145 ~~~iP~~ls~~~Aa~l~~~~~tA~~al~~~~~~~~~~~~g~~VlV~Ga~G~vG~~~~qla~~~Ga~Vi~~~-~~~~~-~~  222 (375)
T 2vn8_A          145 VSHKPKSLTHTQAASLPYVALTAWSAINKVGGLNDKNCTGKRVLILGASGGVGTFAIQVMKAWDAHVTAVC-SQDAS-EL  222 (375)
T ss_dssp             EEECCTTSCHHHHTTSHHHHHHHHHHHTTTTCCCTTTCTTCEEEEETTTSHHHHHHHHHHHHTTCEEEEEE-CGGGH-HH
T ss_pred             eeeCCCCCCHHHHhhhHHHHHHHHHHHHHhcccccccCCCCEEEEECCCCHHHHHHHHHHHhCCCEEEEEe-ChHHH-HH
Confidence            99999999999999999999999999987777    899999999995 9999999999999999999887 45554 45


Q ss_pred             HHHcCCCEEecCCCHHHHHHhc--CCccEEEEcCCCc-ccHHHHHhccccCCEEEEecCCCCC-cc---cCh------HH
Q 018067          224 IERLGADSFLVSRDQDEMQAAM--GTMDGIIDTVSAV-HPLMPLIGLLKSQGKLVLVGAPEKP-LE---LPA------FS  290 (361)
Q Consensus       224 ~~~~g~~~vv~~~~~~~~~~~~--~g~d~vid~~g~~-~~~~~~~~~l~~~G~~v~~g~~~~~-~~---~~~------~~  290 (361)
                      ++++|++.++++++++..+.+.  .++|++||++|+. .++..++++++++|+++.+|..... ..   +..      ..
T Consensus       223 ~~~lGa~~v~~~~~~~~~~~~~~~~g~D~vid~~g~~~~~~~~~~~~l~~~G~iv~~g~~~~~~~~~~~~~~~~~~~~~~  302 (375)
T 2vn8_A          223 VRKLGADDVIDYKSGSVEEQLKSLKPFDFILDNVGGSTETWAPDFLKKWSGATYVTLVTPFLLNMDRLGIADGMLQTGVT  302 (375)
T ss_dssp             HHHTTCSEEEETTSSCHHHHHHTSCCBSEEEESSCTTHHHHGGGGBCSSSCCEEEESCCSHHHHHHHHCHHHHHHHHHHH
T ss_pred             HHHcCCCEEEECCchHHHHHHhhcCCCCEEEECCCChhhhhHHHHHhhcCCcEEEEeCCCcccccccccccchhheeehh
Confidence            5899999999988765554443  4899999999998 4468899999999999999975421 10   110      11


Q ss_pred             HHh-------CCcEEEeccc-CCHHHHHHHHHHHHcCCCceeE-EEEecccHHHHHHHHHcCCCceEEEEEe
Q 018067          291 LLM-------GRKIVGGSMI-GGMKETQEMIDFAAKHNIRADI-EVIPADYVNTALERLAKADVRYRFVIDV  353 (361)
Q Consensus       291 ~~~-------~~~~i~g~~~-~~~~~~~~~~~ll~~~~~~~~~-~~~~l~~~~~a~~~~~~~~~~gkvvi~~  353 (361)
                      ++.       +...+.+... ...+.++++++++++|++++.+ ++|||+++++||+.+++++..||+|+++
T Consensus       303 ~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~l~~~g~l~~~i~~~~~l~~~~~A~~~~~~~~~~gKvvi~~  374 (375)
T 2vn8_A          303 VGSKALKHFWKGVHYRWAFFMASGPCLDDIAELVDAGKIRPVIEQTFPFSKVPEAFLKVERGHARGKTVINV  374 (375)
T ss_dssp             HHHHHHHHHHTTCEEEECCCCCCHHHHHHHHHHHHTTSCCCCEEEEEEGGGHHHHHHHHHHCCCSSEEEEEC
T ss_pred             hccccccccccCcceEEEEeCCCHHHHHHHHHHHHCCCcccCcCeEECHHHHHHHHHHHHcCCCCCeEEEEe
Confidence            212       4555554432 3456789999999999999877 8999999999999999998889999976

>2c0c_A Zinc binding alcohol dehydrogenase, domain containing 2; oxidoreductase, quinone oxidoreductase, medium-chain dehydrogenase/reductase; HET: NAP; 1.45A {Homo sapiens} PDB: 2x1h_A* 2x7h_A* 2wek_A*

Probab=100.00  E-value=8.3e-49  Score=366.85  Aligned_cols=307  Identities=17%  Similarity=0.264  Sum_probs=258.7

Q ss_pred             CcccceeeeeecCCC--CCccc-eeeccCCCCCCeEEEEEeeeccCcchHHhHhcCCCC-CCCCCcccccccEEEEEeCC
Q 018067            8 EHPKNAFGWAAKDTS--GVLSP-FHFSRRATGEKDVTFKVTHCGICHSDLHMIKNEWGN-TIYPIVPGHEIVGVVTEVGS   83 (361)
Q Consensus         8 ~~~~~~~~~~~~~~~--~~l~~-~~~~~p~~~~~evlV~v~~~~i~~~D~~~~~g~~~~-~~~p~~lG~e~~G~Vv~vG~   83 (361)
                      +.+|+++.+..++++  +.+++ +++|.|+|+++||||||+++|||++|++.++|.++. ..+|.++|||++|+|+++|+
T Consensus        21 ~~~MkA~~~~~~g~~~~~~l~~~~~~p~P~~~~~eVlVkv~a~gi~~~D~~~~~G~~~~~~~~P~i~G~E~~G~V~~vG~  100 (362)
T 2c0c_A           21 QSMMQKLVVTRLSPNFREAVTLSRDCPVPLPGDGDLLVRNRFVGVNASDINYSAGRYDPSVKPPFDIGFEGIGEVVALGL  100 (362)
T ss_dssp             CCEEEEEEECSCCSSHHHHEEEEEEEECCCCCTTEEEEEEEEEECCTTHHHHHTTTTCTTCCSCEECCSEEEEEEEEECT
T ss_pred             hhhceEEEEeecCCCccceeEEEeecCCCCCCCCeEEEEEEEeccCHHHHHHhcCCCCCCCCCCCCCCceeEEEEEEECC
Confidence            456888877665433  45888 899999999999999999999999999999987642 46799999999999999999


Q ss_pred             CCC-CCCCCCEEEeccccCCCCCCcccccCCCCCCcchhcccccccCCCCcCCCcceeEEeecCCceEECCCCCCccccc
Q 018067           84 KVS-KFKVGDKVGVGCMVGSCRSCDSCAIDLENYCPKVIMTYANKYHDGTITYGGYSDIMVADEHFVVRIPEGTPLDATA  162 (361)
Q Consensus        84 ~v~-~~~~GdrV~~~~~~~~c~~c~~c~~~~~~~c~~~~~~~~~~~~~~~~~~g~~a~~v~v~~~~~~~ip~~~~~~~aa  162 (361)
                      +|+ +|++||||++                                    ...|+|+||++++++.++++|+..  .++|
T Consensus       101 ~V~~~~~vGdrV~~------------------------------------~~~G~~aey~~v~~~~~~~~P~~~--~~aa  142 (362)
T 2c0c_A          101 SASARYTVGQAVAY------------------------------------MAPGSFAEYTVVPASIATPVPSVK--PEYL  142 (362)
T ss_dssp             TGGGTCCTTCEEEE------------------------------------ECSCCSBSEEEEEGGGCEECSSSC--HHHH
T ss_pred             CccCCCCCCCEEEE------------------------------------ccCCcceeEEEEcHHHeEECCCCc--hHhh
Confidence            999 9999999974                                    236999999999999999999963  4677


Q ss_pred             ccchhhhhhhhHhhhcCCCCCCCEEEEEcC-ChHHHHHHHHHHHcCCeEEEEeCCchhHHHHHHHcCCCEEecCCCHHH-
Q 018067          163 PLLCAGITVYSPLRFYGLDKPGMHVGVVGL-GGLGHVAVKFAKAMGVKVTVISTSPSKKSEAIERLGADSFLVSRDQDE-  240 (361)
Q Consensus       163 ~l~~~~~ta~~~l~~~~~~~~g~~vlV~Ga-g~vG~~a~~la~~~g~~vi~~~~~~~~~~~~~~~~g~~~vv~~~~~~~-  240 (361)
                      ++++++.|||+++.+.+++++|++|||+|+ |++|++++|+|+..|++|+++++++++++.+ +++|++.++++++.+. 
T Consensus       143 al~~~~~ta~~al~~~~~~~~g~~VlV~Ga~G~iG~~~~q~a~~~Ga~Vi~~~~~~~~~~~~-~~~Ga~~~~~~~~~~~~  221 (362)
T 2c0c_A          143 TLLVSGTTAYISLKELGGLSEGKKVLVTAAAGGTGQFAMQLSKKAKCHVIGTCSSDEKSAFL-KSLGCDRPINYKTEPVG  221 (362)
T ss_dssp             TTTTHHHHHHHHHHHHTCCCTTCEEEETTTTBTTHHHHHHHHHHTTCEEEEEESSHHHHHHH-HHTTCSEEEETTTSCHH
T ss_pred             cccchHHHHHHHHHHhcCCCCCCEEEEeCCCcHHHHHHHHHHHhCCCEEEEEECCHHHHHHH-HHcCCcEEEecCChhHH
Confidence            888999999999988888999999999995 9999999999999999999999987776555 7899999998876433 


Q ss_pred             --HHHhc-CCccEEEEcCCCcccHHHHHhccccCCEEEEecCCCCCc-----------ccChHHHHhCCcEEEecccCC-
Q 018067          241 --MQAAM-GTMDGIIDTVSAVHPLMPLIGLLKSQGKLVLVGAPEKPL-----------ELPAFSLLMGRKIVGGSMIGG-  305 (361)
Q Consensus       241 --~~~~~-~g~d~vid~~g~~~~~~~~~~~l~~~G~~v~~g~~~~~~-----------~~~~~~~~~~~~~i~g~~~~~-  305 (361)
                        +.+.. .++|++||++|... +..++++++++|+++.+|......           .+ ...++.+++++.|++... 
T Consensus       222 ~~~~~~~~~g~D~vid~~g~~~-~~~~~~~l~~~G~iv~~g~~~~~~~~~~~~~~~~~~~-~~~~~~~~~~i~g~~~~~~  299 (362)
T 2c0c_A          222 TVLKQEYPEGVDVVYESVGGAM-FDLAVDALATKGRLIVIGFISGYQTPTGLSPVKAGTL-PAKLLKKSASVQGFFLNHY  299 (362)
T ss_dssp             HHHHHHCTTCEEEEEECSCTHH-HHHHHHHEEEEEEEEECCCGGGTTSSSCCCCCCCTTH-HHHHHHHTCEEEECCGGGC
T ss_pred             HHHHHhcCCCCCEEEECCCHHH-HHHHHHHHhcCCEEEEEeCCCCcCccccccccccccc-HHHHHhhcceEEEEEhhhh
Confidence              33333 37999999999865 899999999999999999754211           11 245678999999987542 


Q ss_pred             ----HHHHHHHHHHHHcCCCceeE---------EEEecccHHHHHHHHHcCCCceEEEEEeCC
Q 018067          306 ----MKETQEMIDFAAKHNIRADI---------EVIPADYVNTALERLAKADVRYRFVIDVAN  355 (361)
Q Consensus       306 ----~~~~~~~~~ll~~~~~~~~~---------~~~~l~~~~~a~~~~~~~~~~gkvvi~~~~  355 (361)
                          .++++++++++++|++++.+         +.++|+++++||+.+++++..||+|+.+++
T Consensus       300 ~~~~~~~~~~~~~l~~~g~l~~~~~~~~~~~~~~~~~l~~~~~A~~~~~~~~~~gKvvv~~~~  362 (362)
T 2c0c_A          300 LSKYQAAMSHLLEMCVSGDLVCEVDLGDLSPEGRFTGLESIFRAVNYMYMGKNTGKIVVELPH  362 (362)
T ss_dssp             GGGHHHHHHHHHHHHHTTCSCCCEECSTTSTTCSCBSTTHHHHHHHHHHTTCCSBEEEEECCC
T ss_pred             hhhHHHHHHHHHHHHHCCCeEeeeccccccccccccCHHHHHHHHHHHHcCCCCceEEEEcCC
Confidence                45789999999999998764         357999999999999998888999998753

>4b7c_A Probable oxidoreductase; NADP cofactor, rossmann fold; HET: MES; 2.10A {Pseudomonas aeruginosa PA01} PDB: 4b7x_A*

Probab=100.00  E-value=2.9e-48  Score=359.96  Aligned_cols=303  Identities=20%  Similarity=0.224  Sum_probs=260.5

Q ss_pred             cccceeeeeec--C--CCCCccceeeccCCCCCCeEEEEEeeeccCcchHHhHhcCCCCCCCCCccccc----ccEEEEE
Q 018067            9 HPKNAFGWAAK--D--TSGVLSPFHFSRRATGEKDVTFKVTHCGICHSDLHMIKNEWGNTIYPIVPGHE----IVGVVTE   80 (361)
Q Consensus         9 ~~~~~~~~~~~--~--~~~~l~~~~~~~p~~~~~evlV~v~~~~i~~~D~~~~~g~~~~~~~p~~lG~e----~~G~Vv~   80 (361)
                      .+|+++.+..+  +  +|+.++++++|.|+|+++||||||++++||++|++.+.+... ..+|.++|||    ++|+|++
T Consensus         6 ~~mka~v~~~~~~g~~~~~~l~~~~~~~P~~~~~eVlVkv~a~gi~~~d~~~~~~~~~-~~~p~~~G~e~g~~~~G~V~~   84 (336)
T 4b7c_A            6 QINRQYQLAQRPSGLPGRDTFSFVETPLGEPAEGQILVKNEYLSLDPAMRGWMNDARS-YIPPVGIGEVMRALGVGKVLV   84 (336)
T ss_dssp             CEEEEEEECSCCSSSCCTTSEEEEEEECCCCCTTCEEEEEEEEECCTHHHHHHSCSCC-SSCCCCTTSBCCCEEEEEEEE
T ss_pred             ccccEEEEEecCCCCCCCCceEEEeccCCCCCCCEEEEEEEEEEeCHHHHhhhhcccc-cCCCCCCCcccCCceEEEEEe
Confidence            35777777541  2  468899999999999999999999999999999988876433 3567788888    7999999


Q ss_pred             eCCCCCCCCCCCEEEeccccCCCCCCcccccCCCCCCcchhcccccccCCCCcCCCcceeEEeecCCceEECCCCCCccc
Q 018067           81 VGSKVSKFKVGDKVGVGCMVGSCRSCDSCAIDLENYCPKVIMTYANKYHDGTITYGGYSDIMVADEHFVVRIPEGTPLDA  160 (361)
Q Consensus        81 vG~~v~~~~~GdrV~~~~~~~~c~~c~~c~~~~~~~c~~~~~~~~~~~~~~~~~~g~~a~~v~v~~~~~~~ip~~~~~~~  160 (361)
                      .  ++++|++||||++                                      .|+|+||+.+|+++++++|+++++.+
T Consensus        85 ~--~v~~~~vGdrV~~--------------------------------------~G~~aey~~v~~~~~~~~P~~~~~~~  124 (336)
T 4b7c_A           85 S--KHPGFQAGDYVNG--------------------------------------ALGVQDYFIGEPKGFYKVDPSRAPLP  124 (336)
T ss_dssp             E--CSTTCCTTCEEEE--------------------------------------ECCSBSEEEECCTTCEEECTTTSCGG
T ss_pred             c--CCCCCCCCCEEec--------------------------------------cCCceEEEEechHHeEEcCCCCCchH
Confidence            4  5889999999973                                      58899999999999999999998877


Q ss_pred             c--cccchhhhhhhhHhhhcCCCCCCCEEEEEcC-ChHHHHHHHHHHHcCCeEEEEeCCchhHHHHHHHcCCCEEecCCC
Q 018067          161 T--APLLCAGITVYSPLRFYGLDKPGMHVGVVGL-GGLGHVAVKFAKAMGVKVTVISTSPSKKSEAIERLGADSFLVSRD  237 (361)
Q Consensus       161 a--a~l~~~~~ta~~~l~~~~~~~~g~~vlV~Ga-g~vG~~a~~la~~~g~~vi~~~~~~~~~~~~~~~~g~~~vv~~~~  237 (361)
                      +  +++++++.|||+++.+.+++++|++|||+|+ |++|++++|+|+..|++|+++++++++++.+.+++|++.++++++
T Consensus       125 ~a~a~l~~~~~tA~~al~~~~~~~~g~~vlI~Ga~g~iG~~~~~~a~~~Ga~Vi~~~~~~~~~~~~~~~~g~~~~~~~~~  204 (336)
T 4b7c_A          125 RYLSALGMTGMTAYFALLDVGQPKNGETVVISGAAGAVGSVAGQIARLKGCRVVGIAGGAEKCRFLVEELGFDGAIDYKN  204 (336)
T ss_dssp             GGGTTTSHHHHHHHHHHHHTTCCCTTCEEEESSTTSHHHHHHHHHHHHTTCEEEEEESSHHHHHHHHHTTCCSEEEETTT
T ss_pred             HHhhhcccHHHHHHHHHHHhcCCCCCCEEEEECCCCHHHHHHHHHHHHCCCEEEEEeCCHHHHHHHHHHcCCCEEEECCC
Confidence            6  7899999999999987888999999999998 999999999999999999999999888777668999999999877


Q ss_pred             HHH---HHHhc-CCccEEEEcCCCcccHHHHHhccccCCEEEEecCCCC-------CcccChHHHHhCCcEEEecccCCH
Q 018067          238 QDE---MQAAM-GTMDGIIDTVSAVHPLMPLIGLLKSQGKLVLVGAPEK-------PLELPAFSLLMGRKIVGGSMIGGM  306 (361)
Q Consensus       238 ~~~---~~~~~-~g~d~vid~~g~~~~~~~~~~~l~~~G~~v~~g~~~~-------~~~~~~~~~~~~~~~i~g~~~~~~  306 (361)
                      ++.   +.+.+ +++|++||++|+.. +..++++++++|+++.+|....       ...++...++.+++++.|+.....
T Consensus       205 ~~~~~~~~~~~~~~~d~vi~~~g~~~-~~~~~~~l~~~G~iv~~G~~~~~~~~~~~~~~~~~~~~~~~~~~i~g~~~~~~  283 (336)
T 4b7c_A          205 EDLAAGLKRECPKGIDVFFDNVGGEI-LDTVLTRIAFKARIVLCGAISQYNNKEAVRGPANYLSLLVNRARMEGMVVMDY  283 (336)
T ss_dssp             SCHHHHHHHHCTTCEEEEEESSCHHH-HHHHHTTEEEEEEEEECCCGGGGC------CCTTTTHHHHTTCEEEECCGGGG
T ss_pred             HHHHHHHHHhcCCCceEEEECCCcch-HHHHHHHHhhCCEEEEEeecccccCCcccccchhHHHHHhCCcEEEEEEhhhh
Confidence            543   33334 37999999999865 9999999999999999997541       135566678889999999987654


Q ss_pred             -----HHHHHHHHHHHcCCCceeE-EEEecccHHHHHHHHHcCCCceEEEEEe
Q 018067          307 -----KETQEMIDFAAKHNIRADI-EVIPADYVNTALERLAKADVRYRFVIDV  353 (361)
Q Consensus       307 -----~~~~~~~~ll~~~~~~~~~-~~~~l~~~~~a~~~~~~~~~~gkvvi~~  353 (361)
                           ++++++++++++|++++.+ .+++|+++++||+.+.+++..||+|+++
T Consensus       284 ~~~~~~~~~~~~~l~~~g~l~~~~~~~~~l~~~~~A~~~~~~~~~~gKvvi~~  336 (336)
T 4b7c_A          284 AQRFPEGLKEMATWLAEGKLQSREDIVEGLETFPETLLKLFSGENFGKLVLKV  336 (336)
T ss_dssp             GGGHHHHHHHHHHHHHTTSSCCCEEEEECGGGHHHHHHHHHTTCCCSEEEEEC
T ss_pred             hhhhHHHHHHHHHHHHCCCcccceeeecCHHHHHHHHHHHHcCCCCceEEEeC
Confidence                 6789999999999999887 6799999999999999999889999975

>1xa0_A Putative NADPH dependent oxidoreductases; structural genomics, protein structure initiative, MCSG; HET: DTY; 2.80A {Geobacillus stearothermophilus} SCOP: b.35.1.2 c.2.1.1

Probab=100.00  E-value=7.4e-49  Score=362.75  Aligned_cols=311  Identities=21%  Similarity=0.251  Sum_probs=254.3

Q ss_pred             ccceeeeeecCCCCCccceeeccCCCCCCeEEEEEeeeccCcchHHhHhcCCCC-CCCCCcccccccEEEEEeCCCCCCC
Q 018067           10 PKNAFGWAAKDTSGVLSPFHFSRRATGEKDVTFKVTHCGICHSDLHMIKNEWGN-TIYPIVPGHEIVGVVTEVGSKVSKF   88 (361)
Q Consensus        10 ~~~~~~~~~~~~~~~l~~~~~~~p~~~~~evlV~v~~~~i~~~D~~~~~g~~~~-~~~p~~lG~e~~G~Vv~vG~~v~~~   88 (361)
                      +|+++.+..++++..++++++|.|+|+++||||||+++|||++|++.+.|..+. ..+|.++|||++|+|+++  ++++|
T Consensus         3 ~mka~~~~~~g~~~~l~~~~~~~p~~~~~eVlVkv~a~gi~~~D~~~~~g~~~~~~~~p~v~G~E~~G~V~~~--~v~~~   80 (328)
T 1xa0_A            3 AFQAFVVNKTETEFTAGVQTISMDDLPEGDVLVRVHYSSVNYKDGLASIPDGKIVKTYPFVPGIDLAGVVVSS--QHPRF   80 (328)
T ss_dssp             EEEEEEEEEETTEEEEEEEEEEGGGSCSCSEEEEEEEEECCHHHHHHTSGGGSSCCSSSBCCCSEEEEEEEEC--CSSSC
T ss_pred             cceEEEEecCCCcceeEEEeccCCCCCCCeEEEEEEEEecCHHHHHhhcCCCCCCCCCCcccCcceEEEEEec--CCCCC
Confidence            689988887666667889999999999999999999999999999998886442 367899999999999995  56889


Q ss_pred             CCCCEEEeccccCCCCCCcccccCCCCCCcchhcccccccCCCCcCCCcceeEEeecCCceEECCCCCCcccccccchhh
Q 018067           89 KVGDKVGVGCMVGSCRSCDSCAIDLENYCPKVIMTYANKYHDGTITYGGYSDIMVADEHFVVRIPEGTPLDATAPLLCAG  168 (361)
Q Consensus        89 ~~GdrV~~~~~~~~c~~c~~c~~~~~~~c~~~~~~~~~~~~~~~~~~g~~a~~v~v~~~~~~~ip~~~~~~~aa~l~~~~  168 (361)
                      ++||||++....                             .|....|+|+||+.+|++.++++|+++++++||.+++++
T Consensus        81 ~vGdrV~~~~~~-----------------------------~g~~~~G~~aey~~v~~~~~~~~P~~l~~~~aa~~~~~~  131 (328)
T 1xa0_A           81 REGDEVIATGYE-----------------------------IGVTHFGGYSEYARLHGEWLVPLPKGLTLKEAMAIGTAG  131 (328)
T ss_dssp             CTTCEEEEESTT-----------------------------BTTTBCCSSBSEEEECGGGCEECCTTCCHHHHHHHHHHH
T ss_pred             CCCCEEEEcccc-----------------------------CCCCCCccceeEEEechHHeEECCCCCCHHHhhhhhhhH
Confidence            999999863210                             122457999999999999999999999999999999999


Q ss_pred             hhhhhHhhh--cCCCCCCC-EEEEEcC-ChHHHHHHHHHHHcCCeEEEEeCCchhHHHHHHHcCCCEEecCCCHH--HHH
Q 018067          169 ITVYSPLRF--YGLDKPGM-HVGVVGL-GGLGHVAVKFAKAMGVKVTVISTSPSKKSEAIERLGADSFLVSRDQD--EMQ  242 (361)
Q Consensus       169 ~ta~~~l~~--~~~~~~g~-~vlV~Ga-g~vG~~a~~la~~~g~~vi~~~~~~~~~~~~~~~~g~~~vv~~~~~~--~~~  242 (361)
                      .|||.+++.  ...+++|+ +|||+|+ |++|++++|+|+.+|++|+++++++++++.+ +++|+++++++++.+  .+.
T Consensus       132 ~ta~~~l~~~~~~~~~~g~~~VlV~Ga~G~vG~~~~q~a~~~Ga~vi~~~~~~~~~~~~-~~lGa~~~i~~~~~~~~~~~  210 (328)
T 1xa0_A          132 FTAALSIHRLEEHGLTPERGPVLVTGATGGVGSLAVSMLAKRGYTVEASTGKAAEHDYL-RVLGAKEVLAREDVMAERIR  210 (328)
T ss_dssp             HHHHHHHHHHHHTTCCGGGCCEEESSTTSHHHHHHHHHHHHTTCCEEEEESCTTCHHHH-HHTTCSEEEECC--------
T ss_pred             HHHHHHHHHHhhcCCCCCCceEEEecCCCHHHHHHHHHHHHCCCEEEEEECCHHHHHHH-HHcCCcEEEecCCcHHHHHH
Confidence            999988753  25578886 9999998 9999999999999999999999988776555 789999999887642  233


Q ss_pred             Hhc-CCccEEEEcCCCcccHHHHHhccccCCEEEEecCCCC-CcccChHHHHhCCcEEEeccc--CCH----HHHHHHHH
Q 018067          243 AAM-GTMDGIIDTVSAVHPLMPLIGLLKSQGKLVLVGAPEK-PLELPAFSLLMGRKIVGGSMI--GGM----KETQEMID  314 (361)
Q Consensus       243 ~~~-~g~d~vid~~g~~~~~~~~~~~l~~~G~~v~~g~~~~-~~~~~~~~~~~~~~~i~g~~~--~~~----~~~~~~~~  314 (361)
                      ++. +++|++||++|+.. +..++++++++|+++.+|...+ ...++...++.|++++.|+..  ...    +.++++++
T Consensus       211 ~~~~~~~d~vid~~g~~~-~~~~~~~l~~~G~~v~~G~~~~~~~~~~~~~~~~~~~~i~g~~~~~~~~~~~~~~~~~~~~  289 (328)
T 1xa0_A          211 PLDKQRWAAAVDPVGGRT-LATVLSRMRYGGAVAVSGLTGGAEVPTTVHPFILRGVSLLGIDSVYCPMDLRLRIWERLAG  289 (328)
T ss_dssp             -CCSCCEEEEEECSTTTT-HHHHHHTEEEEEEEEECSCCSSSCCCCCSHHHHHTTCEEEECCSSSCCHHHHHHHHHHHHT
T ss_pred             HhcCCcccEEEECCcHHH-HHHHHHhhccCCEEEEEeecCCCCCCCchhhhhhcCceEEEEecccCCHHHHHHHHHHHHH
Confidence            443 37999999999964 9999999999999999998654 345666677889999999742  232    23455566


Q ss_pred             HHHcCCCceeEEEEecccHHHHHHHHHcCCCceEEEEEeC
Q 018067          315 FAAKHNIRADIEVIPADYVNTALERLAKADVRYRFVIDVA  354 (361)
Q Consensus       315 ll~~~~~~~~~~~~~l~~~~~a~~~~~~~~~~gkvvi~~~  354 (361)
                      +++++ +++..++|+|+++++||+.+++++..||+|++++
T Consensus       290 ~~~~g-l~~~~~~~~l~~~~~A~~~~~~~~~~gKvvv~~~  328 (328)
T 1xa0_A          290 DLKPD-LERIAQEISLAELPQALKRILRGELRGRTVVRLA  328 (328)
T ss_dssp             TTCCC-HHHHEEEEEGGGHHHHHHHHHHTCCCSEEEEECC
T ss_pred             HHHcC-CceeeeEeCHHHHHHHHHHHHcCCCCCeEEEEeC
Confidence            66666 6665699999999999999999988899999863

>1tt7_A YHFP; alcohol dehydrogenase, Zn-dependent, NAD, structural genomics, protein structure initiative, PSI; 2.70A {Bacillus subtilis} SCOP: b.35.1.2 c.2.1.1 PDB: 1y9e_A*

Probab=100.00  E-value=1.8e-49  Score=367.13  Aligned_cols=312  Identities=18%  Similarity=0.212  Sum_probs=258.0

Q ss_pred             cccceeeeeecCCCCCccceeeccCCCCCCeEEEEEeeeccCcchHHhHhcCCCC-CCCCCcccccccEEEEEeCCCCCC
Q 018067            9 HPKNAFGWAAKDTSGVLSPFHFSRRATGEKDVTFKVTHCGICHSDLHMIKNEWGN-TIYPIVPGHEIVGVVTEVGSKVSK   87 (361)
Q Consensus         9 ~~~~~~~~~~~~~~~~l~~~~~~~p~~~~~evlV~v~~~~i~~~D~~~~~g~~~~-~~~p~~lG~e~~G~Vv~vG~~v~~   87 (361)
                      .+|+++.+..++++..++++++|.|+|+++||||||+++|||++|++.++|..+. ..+|.++|||++|+|+++  ++++
T Consensus         3 ~~mka~~~~~~g~~~~l~~~~~~~p~~~~~eVlVkv~a~gi~~~D~~~~~g~~~~~~~~p~i~G~E~~G~V~~~--~v~~   80 (330)
T 1tt7_A            3 TLFQALQAEKNADDVSVHVKTISTEDLPKDGVLIKVAYSGINYKDGLAGKAGGNIVREYPLILGIDAAGTVVSS--NDPR   80 (330)
T ss_dssp             CEEEEEEECCGGGSCCCEEEEEESSSSCSSSEEEEECCEEECHHHHHHTSTTCTTCSSCSEECCSEEEEEEEEC--SSTT
T ss_pred             CcceEEEEecCCCCcceeEeecCCCCCCCCEEEEEEEEEecCHHHHhhhcCCCCCcCCCCccccceEEEEEEEc--CCCC
Confidence            4688888877666668899999999999999999999999999999999886543 367899999999999996  4678


Q ss_pred             CCCCCEEEeccccCCCCCCcccccCCCCCCcchhcccccccCCCCcCCCcceeEEeecCCceEECCCCCCcccccccchh
Q 018067           88 FKVGDKVGVGCMVGSCRSCDSCAIDLENYCPKVIMTYANKYHDGTITYGGYSDIMVADEHFVVRIPEGTPLDATAPLLCA  167 (361)
Q Consensus        88 ~~~GdrV~~~~~~~~c~~c~~c~~~~~~~c~~~~~~~~~~~~~~~~~~g~~a~~v~v~~~~~~~ip~~~~~~~aa~l~~~  167 (361)
                      |++||||++.+..                             .|....|+|+||+.++++.++++|+++++++||.+++.
T Consensus        81 ~~vGdrV~~~~~~-----------------------------~g~~~~G~~aey~~v~~~~~~~iP~~l~~~~aa~l~~~  131 (330)
T 1tt7_A           81 FAEGDEVIATSYE-----------------------------LGVSRDGGLSEYASVPGDWLVPLPQNLSLKEAMVYGTA  131 (330)
T ss_dssp             CCTTCEEEEESTT-----------------------------BTTTBCCSSBSSEEECGGGEEECCTTCCHHHHHHHHHH
T ss_pred             CCCCCEEEEcccc-----------------------------cCCCCCccceeEEEecHHHeEECCCCCCHHHHhhccch
Confidence            9999999863210                             12345799999999999999999999999999999999


Q ss_pred             hhhhhhHhhh--cCCCCCCC-EEEEEcC-ChHHHHHHHHHHHcCCeEEEEeCCchhHHHHHHHcCCCEEecCCCHH--HH
Q 018067          168 GITVYSPLRF--YGLDKPGM-HVGVVGL-GGLGHVAVKFAKAMGVKVTVISTSPSKKSEAIERLGADSFLVSRDQD--EM  241 (361)
Q Consensus       168 ~~ta~~~l~~--~~~~~~g~-~vlV~Ga-g~vG~~a~~la~~~g~~vi~~~~~~~~~~~~~~~~g~~~vv~~~~~~--~~  241 (361)
                      +.|||.+++.  ...+++|+ +|||+|+ |++|++++|+|+.+|++|+++++++++++.+ +++|++.++++++.+  .+
T Consensus       132 ~~ta~~~l~~~~~~~~~~g~~~VlV~Ga~G~vG~~~~q~a~~~Ga~vi~~~~~~~~~~~~-~~lGa~~v~~~~~~~~~~~  210 (330)
T 1tt7_A          132 GFTAALSVHRLEQNGLSPEKGSVLVTGATGGVGGIAVSMLNKRGYDVVASTGNREAADYL-KQLGASEVISREDVYDGTL  210 (330)
T ss_dssp             HHHHHHHHHHHHHTTCCGGGCCEEEESTTSHHHHHHHHHHHHHTCCEEEEESSSSTHHHH-HHHTCSEEEEHHHHCSSCC
T ss_pred             HHHHHHHHHHHHhcCcCCCCceEEEECCCCHHHHHHHHHHHHCCCEEEEEeCCHHHHHHH-HHcCCcEEEECCCchHHHH
Confidence            9999988753  24578886 9999998 9999999999999999999999988776555 789999988865431  11


Q ss_pred             HHhc-CCccEEEEcCCCcccHHHHHhccccCCEEEEecCCCC-CcccChHHHHhCCcEEEeccc--CCH----HHHHHHH
Q 018067          242 QAAM-GTMDGIIDTVSAVHPLMPLIGLLKSQGKLVLVGAPEK-PLELPAFSLLMGRKIVGGSMI--GGM----KETQEMI  313 (361)
Q Consensus       242 ~~~~-~g~d~vid~~g~~~~~~~~~~~l~~~G~~v~~g~~~~-~~~~~~~~~~~~~~~i~g~~~--~~~----~~~~~~~  313 (361)
                      .++. +++|++||++|++. +..++++++++|+++.+|...+ ...++...++.|++++.|+..  ...    +.+++++
T Consensus       211 ~~~~~~~~d~vid~~g~~~-~~~~~~~l~~~G~iv~~G~~~~~~~~~~~~~~~~~~~~i~g~~~~~~~~~~~~~~~~~~~  289 (330)
T 1tt7_A          211 KALSKQQWQGAVDPVGGKQ-LASLLSKIQYGGSVAVSGLTGGGEVPATVYPFILRGVSLLGIDSVYCPMDVRAAVWERMS  289 (330)
T ss_dssp             CSSCCCCEEEEEESCCTHH-HHHHHTTEEEEEEEEECCCSSCSCEEECSHHHHTSCCEEEECCSSSCCHHHHHHHHHHTT
T ss_pred             HHhhcCCccEEEECCcHHH-HHHHHHhhcCCCEEEEEecCCCCccCcchHHHHhcCeEEEEEeccccCHHHHHHHHHHHH
Confidence            2222 37999999999965 9999999999999999998654 355666677889999999742  232    3455666


Q ss_pred             HHHHcCCCceeE-EEEecccHHHHHHHHHcCCCceEEEEEe
Q 018067          314 DFAAKHNIRADI-EVIPADYVNTALERLAKADVRYRFVIDV  353 (361)
Q Consensus       314 ~ll~~~~~~~~~-~~~~l~~~~~a~~~~~~~~~~gkvvi~~  353 (361)
                      +++.++++++.+ ++|||+++++||+.+++++..||+|+.+
T Consensus       290 ~~~~~g~l~~~i~~~~~l~~~~~A~~~~~~~~~~gKvvi~~  330 (330)
T 1tt7_A          290 SDLKPDQLLTIVDREVSLEETPGALKDILQNRIQGRVIVKL  330 (330)
T ss_dssp             TTSCCSCSTTSEEEEECSTTHHHHHHHTTTTCCSSEEEECC
T ss_pred             HHHhcCCcccccceEEcHHHHHHHHHHHHcCCCCCeEEEeC
Confidence            777788888877 8999999999999999988889999864

>2zb4_A Prostaglandin reductase 2; rossmann fold, alternative splicing, cytoplasm, NADP, oxidoreductase; HET: NAP 5OP; 1.63A {Homo sapiens} PDB: 2zb7_A* 2zb8_A* 2w98_A* 2vna_A* 2w4q_A* 1vj1_A 2zb3_A*

Probab=100.00  E-value=1.3e-47  Score=358.44  Aligned_cols=311  Identities=12%  Similarity=0.109  Sum_probs=259.5

Q ss_pred             CCCCcccceeee-eec---CCC--CCccceeeccCCC-CCCeEEEEEeeeccCcchHHhHhc----CCC-CCCCCCcccc
Q 018067            5 PEQEHPKNAFGW-AAK---DTS--GVLSPFHFSRRAT-GEKDVTFKVTHCGICHSDLHMIKN----EWG-NTIYPIVPGH   72 (361)
Q Consensus         5 ~~~~~~~~~~~~-~~~---~~~--~~l~~~~~~~p~~-~~~evlV~v~~~~i~~~D~~~~~g----~~~-~~~~p~~lG~   72 (361)
                      +.++.+|+++.+ ...   +.|  +.++++++|.|+| +++||||||+++|||++|++.+.+    .+. ...+|.++||
T Consensus         3 ~~~~~~mka~v~~~~~~~~g~p~~~~l~~~~~~~P~~~~~~eVlVkv~a~gi~~~D~~~~~~~~g~~~~~~~~~p~v~G~   82 (357)
T 2zb4_A            3 AAAAMIVQRVVLNSRPGKNGNPVAENFRMEEVYLPDNINEGQVQVRTLYLSVDPYMRCRMNEDTGTDYITPWQLSQVVDG   82 (357)
T ss_dssp             ---CCEEEEEEECCCCCTTSCCCGGGEEEEEEECCSCCCTTEEEEEEEEEECCTTHHHHTSSSCSSSSSCCCCBTSBCEE
T ss_pred             CcccccceEEEEeccCCCCCCCCcCceEEEeecCCCCCCCCeEEEEEEEEecCHHHHhhccccccccccCCCCCCccccc
Confidence            455667888877 343   445  7799999999999 999999999999999999987775    232 2367889999


Q ss_pred             cccEEEEEeCCCCCCCCCCCEEEeccccCCCCCCcccccCCCCCCcchhcccccccCCCCcCCCcceeEEeecCCceEEC
Q 018067           73 EIVGVVTEVGSKVSKFKVGDKVGVGCMVGSCRSCDSCAIDLENYCPKVIMTYANKYHDGTITYGGYSDIMVADEHFVVRI  152 (361)
Q Consensus        73 e~~G~Vv~vG~~v~~~~~GdrV~~~~~~~~c~~c~~c~~~~~~~c~~~~~~~~~~~~~~~~~~g~~a~~v~v~~~~~~~i  152 (361)
                      |++|+|++  ++|++|++||||++                                     ..|+|+||++++++.++++
T Consensus        83 E~~G~V~~--~~v~~~~vGdrV~~-------------------------------------~~G~~aey~~v~~~~~~~i  123 (357)
T 2zb4_A           83 GGIGIIEE--SKHTNLTKGDFVTS-------------------------------------FYWPWQTKVILDGNSLEKV  123 (357)
T ss_dssp             EEEEEEEE--ECSTTCCTTCEEEE-------------------------------------EEEESBSEEEEEGGGCEEC
T ss_pred             cEEEEEEe--cCCCCCCCCCEEEe-------------------------------------cCCCcEEEEEEchHHceec
Confidence            99999999  88999999999974                                     2478999999999999999


Q ss_pred             CCCC-----CcccccccchhhhhhhhHhhhcCCCCCC--CEEEEEcC-ChHHHHHHHHHHHcCC-eEEEEeCCchhHHHH
Q 018067          153 PEGT-----PLDATAPLLCAGITVYSPLRFYGLDKPG--MHVGVVGL-GGLGHVAVKFAKAMGV-KVTVISTSPSKKSEA  223 (361)
Q Consensus       153 p~~~-----~~~~aa~l~~~~~ta~~~l~~~~~~~~g--~~vlV~Ga-g~vG~~a~~la~~~g~-~vi~~~~~~~~~~~~  223 (361)
                      |+++     +++ ++++++++.|||+++.+.+++++|  ++|||+|+ |++|++++|+|+..|+ +|+++++++++++.+
T Consensus       124 P~~~~~~~~~~~-~a~l~~~~~ta~~al~~~~~~~~g~~~~vlI~GasggiG~~~~~~a~~~Ga~~Vi~~~~~~~~~~~~  202 (357)
T 2zb4_A          124 DPQLVDGHLSYF-LGAIGMPGLTSLIGIQEKGHITAGSNKTMVVSGAAGACGSVAGQIGHFLGCSRVVGICGTHEKCILL  202 (357)
T ss_dssp             CGGGGTTCGGGG-GTTTSHHHHHHHHHHHHHSCCCTTSCCEEEESSTTBHHHHHHHHHHHHTTCSEEEEEESCHHHHHHH
T ss_pred             CcccccCchhHH-HHhcccHHHHHHHHHHHhcCCCCCCccEEEEECCCcHHHHHHHHHHHHCCCCeEEEEeCCHHHHHHH
Confidence            9999     555 778999999999999777789999  99999998 9999999999999999 999999988877766


Q ss_pred             HHHcCCCEEecCCCHH---HHHHhcC-CccEEEEcCCCcccHHHHHhccccCCEEEEecCCCC---CcccC-------hH
Q 018067          224 IERLGADSFLVSRDQD---EMQAAMG-TMDGIIDTVSAVHPLMPLIGLLKSQGKLVLVGAPEK---PLELP-------AF  289 (361)
Q Consensus       224 ~~~~g~~~vv~~~~~~---~~~~~~~-g~d~vid~~g~~~~~~~~~~~l~~~G~~v~~g~~~~---~~~~~-------~~  289 (361)
                      .+++|++.++++++.+   .+.+.+. ++|++||++|+.. +..++++++++|+++.+|....   .+.++       ..
T Consensus       203 ~~~~g~~~~~d~~~~~~~~~~~~~~~~~~d~vi~~~G~~~-~~~~~~~l~~~G~iv~~G~~~~~~~~~~~~~~~~~~~~~  281 (357)
T 2zb4_A          203 TSELGFDAAINYKKDNVAEQLRESCPAGVDVYFDNVGGNI-SDTVISQMNENSHIILCGQISQYNKDVPYPPPLSPAIEA  281 (357)
T ss_dssp             HHTSCCSEEEETTTSCHHHHHHHHCTTCEEEEEESCCHHH-HHHHHHTEEEEEEEEECCCGGGTTSCCCSSCCCCHHHHH
T ss_pred             HHHcCCceEEecCchHHHHHHHHhcCCCCCEEEECCCHHH-HHHHHHHhccCcEEEEECCccccccCccccccchhhhhh
Confidence            4459999888887643   3334443 7999999999855 8999999999999999997543   22222       14


Q ss_pred             HHHhCCcEEEecccCC-----HHHHHHHHHHHHcCCCceeE-EEEecccHHHHHHHHHcCCCceEEEEEeCCc
Q 018067          290 SLLMGRKIVGGSMIGG-----MKETQEMIDFAAKHNIRADI-EVIPADYVNTALERLAKADVRYRFVIDVANT  356 (361)
Q Consensus       290 ~~~~~~~~i~g~~~~~-----~~~~~~~~~ll~~~~~~~~~-~~~~l~~~~~a~~~~~~~~~~gkvvi~~~~~  356 (361)
                      .++.+++++.|+....     .++++++++++++|++++.+ .+|+|+++++||+.+++++..||+|++++++
T Consensus       282 ~~~~~~~~i~g~~~~~~~~~~~~~~~~~~~l~~~g~l~~~~~~~~~l~~~~~A~~~~~~~~~~gKvvi~~~~~  354 (357)
T 2zb4_A          282 IQKERNITRERFLVLNYKDKFEPGILQLSQWFKEGKLKIKETVINGLENMGAAFQSMMTGGNIGKQIVCISEE  354 (357)
T ss_dssp             HHHHHTCEEEECCGGGGGGGHHHHHHHHHHHHHTTCCCCCEEEEECGGGHHHHHHHHHTTCCSBEEEEECCCC
T ss_pred             hhhcceeEEEEeehhhhhHHHHHHHHHHHHHHHcCCCcCccceecCHHHHHHHHHHHHcCCCCceEEEEEecc
Confidence            5678999999987644     56789999999999999876 7899999999999999998889999999765

>1iz0_A Quinone oxidoreductase; APO-enzyme, riken structural genomics/proteomics initiative, RSGI, structural genomics; 2.30A {Thermus thermophilus} SCOP: b.35.1.2 c.2.1.1 PDB: 1iyz_A 2cf2_D

Probab=100.00  E-value=2.4e-47  Score=348.61  Aligned_cols=290  Identities=23%  Similarity=0.343  Sum_probs=247.7

Q ss_pred             cceeeeeecCCCCCccceeeccCCCCCCeEEEEEeeeccCcchHHhHhcCCCC-CCCCCcccccccEEEEEeCCCCCCCC
Q 018067           11 KNAFGWAAKDTSGVLSPFHFSRRATGEKDVTFKVTHCGICHSDLHMIKNEWGN-TIYPIVPGHEIVGVVTEVGSKVSKFK   89 (361)
Q Consensus        11 ~~~~~~~~~~~~~~l~~~~~~~p~~~~~evlV~v~~~~i~~~D~~~~~g~~~~-~~~p~~lG~e~~G~Vv~vG~~v~~~~   89 (361)
                      |+++.+..++.+..  ++++|.|+++++||||||+++|||++|++.+.|.++. ..+|.++|||++|+|+          
T Consensus         1 Mka~~~~~~g~~~~--l~~~~~p~~~~~eVlVkv~a~gi~~~D~~~~~g~~~~~~~~p~i~G~e~~G~V~----------   68 (302)
T 1iz0_A            1 MKAWVLKRLGGPLE--LVDLPEPEAEEGEVVLRVEAVGLNFADHLMRLGAYLTRLHPPFIPGMEVVGVVE----------   68 (302)
T ss_dssp             CEEEEECSTTSCEE--EEECCCCCCCTTEEEEEEEEEEECHHHHHHHHTCSSSCCCSSBCCCCEEEEEET----------
T ss_pred             CeEEEEcCCCCchh--eEECCCCCCCCCEEEEEEEEEecCHHHHHHhCCCCCCCCCCCCcccceEEEEEE----------
Confidence            66777655544433  4488999999999999999999999999999986653 3679999999999998          


Q ss_pred             CCCEEEeccccCCCCCCcccccCCCCCCcchhcccccccCCCCcCCCcceeEEeecCCceEECCCCCCcccccccchhhh
Q 018067           90 VGDKVGVGCMVGSCRSCDSCAIDLENYCPKVIMTYANKYHDGTITYGGYSDIMVADEHFVVRIPEGTPLDATAPLLCAGI  169 (361)
Q Consensus        90 ~GdrV~~~~~~~~c~~c~~c~~~~~~~c~~~~~~~~~~~~~~~~~~g~~a~~v~v~~~~~~~ip~~~~~~~aa~l~~~~~  169 (361)
                       ||||++.                                   ..+|+|+||+.++++.++++|+++++++||++++++.
T Consensus        69 -GdrV~~~-----------------------------------~~~G~~aey~~v~~~~~~~iP~~~~~~~aa~l~~~~~  112 (302)
T 1iz0_A           69 -GRRYAAL-----------------------------------VPQGGLAERVAVPKGALLPLPEGLSPEEAAAFPVSFL  112 (302)
T ss_dssp             -TEEEEEE-----------------------------------CSSCCSBSEEEEEGGGCEECCTTCCHHHHHTSHHHHH
T ss_pred             -CcEEEEe-----------------------------------cCCcceeeEEEEcHHHcEeCCCCCCHHHHHHhhhHHH
Confidence             9999752                                   2469999999999999999999999999999999999


Q ss_pred             hhhhHhhhcCCCCCCCEEEEEcC-ChHHHHHHHHHHHcCCeEEEEeCCchhHHHHHHHcCCCEEecCCC-HHHHHHhcCC
Q 018067          170 TVYSPLRFYGLDKPGMHVGVVGL-GGLGHVAVKFAKAMGVKVTVISTSPSKKSEAIERLGADSFLVSRD-QDEMQAAMGT  247 (361)
Q Consensus       170 ta~~~l~~~~~~~~g~~vlV~Ga-g~vG~~a~~la~~~g~~vi~~~~~~~~~~~~~~~~g~~~vv~~~~-~~~~~~~~~g  247 (361)
                      |||+++.+.+ +++|++|||+|+ |++|++++|+|+.+|++|+++++++++++.+ +++|++.++++++ .+..+.+ .+
T Consensus       113 ta~~~l~~~~-~~~g~~vlV~Ga~G~vG~~~~~~a~~~Ga~Vi~~~~~~~~~~~~-~~~ga~~~~~~~~~~~~~~~~-~~  189 (302)
T 1iz0_A          113 TAYLALKRAQ-ARPGEKVLVQAAAGALGTAAVQVARAMGLRVLAAASRPEKLALP-LALGAEEAATYAEVPERAKAW-GG  189 (302)
T ss_dssp             HHHHHHHHTT-CCTTCEEEESSTTBHHHHHHHHHHHHTTCEEEEEESSGGGSHHH-HHTTCSEEEEGGGHHHHHHHT-TS
T ss_pred             HHHHHHHHhc-CCCCCEEEEECCCcHHHHHHHHHHHHCCCEEEEEeCCHHHHHHH-HhcCCCEEEECCcchhHHHHh-cC
Confidence            9999998777 899999999998 9999999999999999999999988877655 7899999998877 6665555 78


Q ss_pred             ccEEEEcCCCcccHHHHHhccccCCEEEEecCCCCC-cccChHHHHhCCcEEEecccC----CHHHHHHHHH---HHHcC
Q 018067          248 MDGIIDTVSAVHPLMPLIGLLKSQGKLVLVGAPEKP-LELPAFSLLMGRKIVGGSMIG----GMKETQEMID---FAAKH  319 (361)
Q Consensus       248 ~d~vid~~g~~~~~~~~~~~l~~~G~~v~~g~~~~~-~~~~~~~~~~~~~~i~g~~~~----~~~~~~~~~~---ll~~~  319 (361)
                      +|++|| +|+. .+..++++++++|+++.+|..... ..++...++.+++++.|+...    ..++++++++   ++.+|
T Consensus       190 ~d~vid-~g~~-~~~~~~~~l~~~G~~v~~g~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~~l~~~g  267 (302)
T 1iz0_A          190 LDLVLE-VRGK-EVEESLGLLAHGGRLVYIGAAEGEVAPIPPLRLMRRNLAVLGFWLTPLLREGALVEEALGFLLPRLGR  267 (302)
T ss_dssp             EEEEEE-CSCT-THHHHHTTEEEEEEEEEC-------CCCCTTHHHHTTCEEEECCHHHHTTCHHHHHHHHHHHGGGBTT
T ss_pred             ceEEEE-CCHH-HHHHHHHhhccCCEEEEEeCCCCCCCCcCHHHHHhCCCeEEEEeccchhhhHHHHHHHHhhhHHHHcC
Confidence            999999 9985 499999999999999999976543 245666678899999998753    4678999999   99999


Q ss_pred             CCceeE-EEEecccHHHHHHHHHcCCCceEEEEEe
Q 018067          320 NIRADI-EVIPADYVNTALERLAKADVRYRFVIDV  353 (361)
Q Consensus       320 ~~~~~~-~~~~l~~~~~a~~~~~~~~~~gkvvi~~  353 (361)
                      ++++.+ ++|+|+++++||+.+.+++..||+++.+
T Consensus       268 ~l~~~i~~~~~l~~~~~A~~~~~~~~~~gKvvv~~  302 (302)
T 1iz0_A          268 ELRPVVGPVFPFAEAEAAFRALLDRGHTGKVVVRL  302 (302)
T ss_dssp             TBCCCEEEEEEGGGHHHHHHHTTCTTCCBEEEEEC
T ss_pred             CcccccceEEcHHHHHHHHHHHHcCCCCceEEEeC
Confidence            999877 8999999999999999888889999864

>3iup_A Putative NADPH:quinone oxidoreductase; YP_296108.1, structur genomics, joint center for structural genomics, JCSG, prote structure initiative; HET: MSE NDP; 1.70A {Ralstonia eutropha}

Probab=100.00  E-value=4.7e-48  Score=363.78  Aligned_cols=306  Identities=15%  Similarity=0.105  Sum_probs=247.8

Q ss_pred             cccceeeeeecCCCCCccceeeccCCCCCCeEEEEEeeeccCcchHHhHhcCCC--------------------------
Q 018067            9 HPKNAFGWAAKDTSGVLSPFHFSRRATGEKDVTFKVTHCGICHSDLHMIKNEWG--------------------------   62 (361)
Q Consensus         9 ~~~~~~~~~~~~~~~~l~~~~~~~p~~~~~evlV~v~~~~i~~~D~~~~~g~~~--------------------------   62 (361)
                      ..|+++..  ..++..++++++|.|+|+++||||||++++||++|++.++|.++                          
T Consensus         6 ~~mka~v~--~~~~~~l~~~~~~~P~~~~~eVlVkv~a~gi~~~D~~~~~g~~~~~~~~~~g~~~~p~~~~~~p~~~~~~   83 (379)
T 3iup_A            6 LQLRSRIK--SSGELELSLDSIDTPHPGPDEVLIRIEASPLNPSDLGLLFGAADMSTAKASGTAERPIVTARVPEGAMRS   83 (379)
T ss_dssp             EEEEEEEC--TTSEEEEEEEEEECCCCCTTEEEEEEEEEECCHHHHHHHHTTCEEEEEEEEECSSSEEEEEECCHHHHHH
T ss_pred             hhHHHHHh--cCCCCceEEEeccCCCCCCCEEEEEEEEEecCHHHHHHhcCCccccccccccccccccccccCccccccc
Confidence            34555443  33556789999999999999999999999999999999988521                          


Q ss_pred             ---CCCCCCcccccccEEEEEeCCCC-CCCCCCCEEEeccccCCCCCCcccccCCCCCCcchhcccccccCCCCcCCCcc
Q 018067           63 ---NTIYPIVPGHEIVGVVTEVGSKV-SKFKVGDKVGVGCMVGSCRSCDSCAIDLENYCPKVIMTYANKYHDGTITYGGY  138 (361)
Q Consensus        63 ---~~~~p~~lG~e~~G~Vv~vG~~v-~~~~~GdrV~~~~~~~~c~~c~~c~~~~~~~c~~~~~~~~~~~~~~~~~~g~~  138 (361)
                         ...+|.++|||++|+|+++|++| ++|++||||++                                    ...|+|
T Consensus        84 ~~~~~~~p~i~G~e~~G~V~~vG~~v~~~~~vGdrV~~------------------------------------~~~G~~  127 (379)
T 3iup_A           84 MAGRLDASMPVGNEGAGVVVEAGSSPAAQALMGKTVAA------------------------------------IGGAMY  127 (379)
T ss_dssp             HGGGTTEEEECCSCEEEEEEEECSSHHHHTTTTCEEEE------------------------------------CCSCCS
T ss_pred             cccccCCCccceeeeEEEEEEeCCCcccCCCCCCEEEe------------------------------------cCCCcc
Confidence               23568899999999999999999 88999999975                                    236999


Q ss_pred             eeEEeecCCceEECCCCCCcccccccchhhhhhhhHhhhcCCCCCCCEEEEE--cCChHHHHHHHHHHHcCCeEEEEeCC
Q 018067          139 SDIMVADEHFVVRIPEGTPLDATAPLLCAGITVYSPLRFYGLDKPGMHVGVV--GLGGLGHVAVKFAKAMGVKVTVISTS  216 (361)
Q Consensus       139 a~~v~v~~~~~~~ip~~~~~~~aa~l~~~~~ta~~~l~~~~~~~~g~~vlV~--Gag~vG~~a~~la~~~g~~vi~~~~~  216 (361)
                      +||+++++++++++|+++++++||++++.++|||++++...  ++|++|||+  |+|++|++++|+|+.+|++|++++++
T Consensus       128 aey~~v~~~~~~~iP~~~~~~~aa~l~~~~~ta~~~~~~~~--~~g~~vlV~gag~G~vG~~a~q~a~~~Ga~Vi~~~~~  205 (379)
T 3iup_A          128 SQYRCIPADQCLVLPEGATPADGASSFVNPLTALGMVETMR--LEGHSALVHTAAASNLGQMLNQICLKDGIKLVNIVRK  205 (379)
T ss_dssp             BSEEEEEGGGEEECCTTCCHHHHTTSSHHHHHHHHHHHHHH--HTTCSCEEESSTTSHHHHHHHHHHHHHTCCEEEEESS
T ss_pred             eeEEEeCHHHeEECCCCCCHHHHHhhhhhHHHHHHHHHHhc--cCCCEEEEECCCCCHHHHHHHHHHHHCCCEEEEEECC
Confidence            99999999999999999999999999999999998887654  899999999  45999999999999999999999988


Q ss_pred             chhHHHHHHHcCCCEEecCCCHHH---HHHhcC--CccEEEEcCCCcccHHHHHhccc-----cC-----------CEEE
Q 018067          217 PSKKSEAIERLGADSFLVSRDQDE---MQAAMG--TMDGIIDTVSAVHPLMPLIGLLK-----SQ-----------GKLV  275 (361)
Q Consensus       217 ~~~~~~~~~~~g~~~vv~~~~~~~---~~~~~~--g~d~vid~~g~~~~~~~~~~~l~-----~~-----------G~~v  275 (361)
                      +++++.+ +++|+++++++++++.   +.++++  ++|++|||+|++.....++++++     ++           |+++
T Consensus       206 ~~~~~~~-~~lGa~~~~~~~~~~~~~~v~~~t~~~g~d~v~d~~g~~~~~~~~~~~l~~~~~r~~G~~~~~G~~~~g~iv  284 (379)
T 3iup_A          206 QEQADLL-KAQGAVHVCNAASPTFMQDLTEALVSTGATIAFDATGGGKLGGQILTCMEAALNKSAREYSRYGSTTHKQVY  284 (379)
T ss_dssp             HHHHHHH-HHTTCSCEEETTSTTHHHHHHHHHHHHCCCEEEESCEEESHHHHHHHHHHHHHHTTCCSCCTTCCCSCEEEE
T ss_pred             HHHHHHH-HhCCCcEEEeCCChHHHHHHHHHhcCCCceEEEECCCchhhHHHHHHhcchhhhccccceeecccccCceEE
Confidence            8776555 7899999999887654   334443  79999999999776788888885     45           5555


Q ss_pred             EecCCCCCcccChHHHHhCCcEEEecccCCH------HH----HHHHHHHHHcCCCceeE-EEEecccH--HHHHHHHHc
Q 018067          276 LVGAPEKPLELPAFSLLMGRKIVGGSMIGGM------KE----TQEMIDFAAKHNIRADI-EVIPADYV--NTALERLAK  342 (361)
Q Consensus       276 ~~g~~~~~~~~~~~~~~~~~~~i~g~~~~~~------~~----~~~~~~ll~~~~~~~~~-~~~~l~~~--~~a~~~~~~  342 (361)
                      .+|..+. ..++...++.+++++.|+.....      ++    ++++++++.+ ++++.+ ++|+|+++  ++||+.+.+
T Consensus       285 ~~G~~~~-~~~~~~~~~~~~~~i~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~l~~~i~~~~~l~~~~~~~A~~~l~~  362 (379)
T 3iup_A          285 LYGGLDT-SPTEFNRNFGMAWGMGGWLLFPFLQKIGRERANALKQRVVAELKT-TFASHYSKEISLAEVLDLDMIAVYNK  362 (379)
T ss_dssp             ECCCSEE-EEEEECCCSCSCEEEEECCHHHHHHHHCHHHHHHHHHHHHHTTTT-TTCCCCSEEEEHHHHTCHHHHHHHTT
T ss_pred             EecCCCC-CccccccccccceEEEEEEeeeecccCCHHHHHHHHHHHHHHHhc-cCCCcceEEecHHHhhhHHHHHHHhc
Confidence            5554321 12223345668899999765432      22    3555666666 577777 89999999  999999999


Q ss_pred             CCCceEEEEEeCCcc
Q 018067          343 ADVRYRFVIDVANTM  357 (361)
Q Consensus       343 ~~~~gkvvi~~~~~~  357 (361)
                      ++..||+|++++...
T Consensus       363 ~~~~gKvVv~~~~g~  377 (379)
T 3iup_A          363 RATGEKYLINPNKGL  377 (379)
T ss_dssp             CCTTCCEEEETTTTC
T ss_pred             CCCCceEEEeCCCCC
Confidence            998999999998654

>2j3h_A NADP-dependent oxidoreductase P1; double bond reductase (AT5G16970), APO form; 2.5A {Arabidopsis thaliana} PDB: 2j3i_A* 2j3j_A* 2j3k_A*

Probab=100.00  E-value=8.3e-45  Score=337.92  Aligned_cols=307  Identities=16%  Similarity=0.112  Sum_probs=253.2

Q ss_pred             Ccccceeeeeec--CCCC--Cccce--eeccCC-CCCCeEEEEEeeeccCcchHHhHhcCCCC----CCCCCcccccccE
Q 018067            8 EHPKNAFGWAAK--DTSG--VLSPF--HFSRRA-TGEKDVTFKVTHCGICHSDLHMIKNEWGN----TIYPIVPGHEIVG   76 (361)
Q Consensus         8 ~~~~~~~~~~~~--~~~~--~l~~~--~~~~p~-~~~~evlV~v~~~~i~~~D~~~~~g~~~~----~~~p~~lG~e~~G   76 (361)
                      |.+|+++.+..+  +.|+  .++++  +++.|. |+++||||||+++|+|+.|. ...|....    ..+|+++|||++|
T Consensus         2 ~~~mka~~m~a~~~~~p~~~~l~~~~~~~~~P~~~~~~eVlVkv~a~g~~~~~~-~~~g~~~~~~~~~~~p~v~G~e~~G   80 (345)
T 2j3h_A            2 TATNKQVILKDYVSGFPTESDFDFTTTTVELRVPEGTNSVLVKNLYLSCDPYMR-IRMGKPDPSTAALAQAYTPGQPIQG   80 (345)
T ss_dssp             EEEEEEEEECSCBSSSCCGGGEEEEEEEEECCSCSSSSCEEEEECEEECCTTHH-HHHBC---------CCCCTTSBCEE
T ss_pred             CccceEEEEecCCCCCCCccceeEEEeecCCCCCCCCCEEEEEEEEecCCHHHH-hhcccCCCCccccCCCcCCCCeeec
Confidence            346888877665  6777  68887  888886 89999999999999988875 44554322    2468999999999


Q ss_pred             EEEE--eCCCCCCCCCCCEEEeccccCCCCCCcccccCCCCCCcchhcccccccCCCCcCCCcceeEEeecCCc--eEEC
Q 018067           77 VVTE--VGSKVSKFKVGDKVGVGCMVGSCRSCDSCAIDLENYCPKVIMTYANKYHDGTITYGGYSDIMVADEHF--VVRI  152 (361)
Q Consensus        77 ~Vv~--vG~~v~~~~~GdrV~~~~~~~~c~~c~~c~~~~~~~c~~~~~~~~~~~~~~~~~~g~~a~~v~v~~~~--~~~i  152 (361)
                      ++++  +|+++++|++||||++                                      .|+|+||+.++++.  ++++
T Consensus        81 ~~~~GvV~~~v~~~~vGdrV~~--------------------------------------~g~~aey~~v~~~~~~~~~i  122 (345)
T 2j3h_A           81 YGVSRIIESGHPDYKKGDLLWG--------------------------------------IVAWEEYSVITPMTHAHFKI  122 (345)
T ss_dssp             EEEEEEEEECSTTCCTTCEEEE--------------------------------------EEESBSEEEECCCTTTCEEE
T ss_pred             ceEEEEEecCCCCCCCCCEEEe--------------------------------------ecCceeEEEecccccceeec
Confidence            9999  9999999999999963                                      37899999998876  9999


Q ss_pred             CC---CCCcccccccchhhhhhhhHhhhcCCCCCCCEEEEEcC-ChHHHHHHHHHHHcCCeEEEEeCCchhHHHHHHHcC
Q 018067          153 PE---GTPLDATAPLLCAGITVYSPLRFYGLDKPGMHVGVVGL-GGLGHVAVKFAKAMGVKVTVISTSPSKKSEAIERLG  228 (361)
Q Consensus       153 p~---~~~~~~aa~l~~~~~ta~~~l~~~~~~~~g~~vlV~Ga-g~vG~~a~~la~~~g~~vi~~~~~~~~~~~~~~~~g  228 (361)
                      |+   +++++ +|++++++.|||+++.+..++++|++|||+|+ |++|++++|+|+..|++|+++++++++++.+.+++|
T Consensus       123 p~~~~~~~~~-aa~l~~~~~ta~~al~~~~~~~~g~~vlI~Ga~g~iG~~~~~~a~~~G~~V~~~~~~~~~~~~~~~~~g  201 (345)
T 2j3h_A          123 QHTDVPLSYY-TGLLGMPGMTAYAGFYEVCSPKEGETVYVSAASGAVGQLVGQLAKMMGCYVVGSAGSKEKVDLLKTKFG  201 (345)
T ss_dssp             CCCSSCTTGG-GTTTSHHHHHHHHHHHTTSCCCTTCEEEESSTTSHHHHHHHHHHHHTTCEEEEEESSHHHHHHHHHTSC
T ss_pred             CCCCCCHHHH-HHhccccHHHHHHHHHHHhCCCCCCEEEEECCCcHHHHHHHHHHHHCCCEEEEEeCCHHHHHHHHHHcC
Confidence            96   35555 67899999999999987778999999999997 999999999999999999999998887766644799


Q ss_pred             CCEEecCCCH----HHHHHhc-CCccEEEEcCCCcccHHHHHhccccCCEEEEecCCCC------CcccChHHHHhCCcE
Q 018067          229 ADSFLVSRDQ----DEMQAAM-GTMDGIIDTVSAVHPLMPLIGLLKSQGKLVLVGAPEK------PLELPAFSLLMGRKI  297 (361)
Q Consensus       229 ~~~vv~~~~~----~~~~~~~-~g~d~vid~~g~~~~~~~~~~~l~~~G~~v~~g~~~~------~~~~~~~~~~~~~~~  297 (361)
                      ++.++|+++.    +.+.+++ +++|++||++|+.. +..++++++++|+++.+|....      ...++...++.++++
T Consensus       202 ~~~~~d~~~~~~~~~~~~~~~~~~~d~vi~~~g~~~-~~~~~~~l~~~G~~v~~G~~~~~~~~~~~~~~~~~~~~~~~~~  280 (345)
T 2j3h_A          202 FDDAFNYKEESDLTAALKRCFPNGIDIYFENVGGKM-LDAVLVNMNMHGRIAVCGMISQYNLENQEGVHNLSNIIYKRNR  280 (345)
T ss_dssp             CSEEEETTSCSCSHHHHHHHCTTCEEEEEESSCHHH-HHHHHTTEEEEEEEEECCCGGGTTCSSCCCBSCTTHHHHHTCE
T ss_pred             CceEEecCCHHHHHHHHHHHhCCCCcEEEECCCHHH-HHHHHHHHhcCCEEEEEccccccccCCccccccHHHHhhhcee
Confidence            9988887652    3444444 37999999999854 8999999999999999987543      234555677889999


Q ss_pred             EEecccCCH-----HHHHHHHHHHHcCCCceeE-EEEecccHHHHHHHHHcCCCceEEEEEeCC
Q 018067          298 VGGSMIGGM-----KETQEMIDFAAKHNIRADI-EVIPADYVNTALERLAKADVRYRFVIDVAN  355 (361)
Q Consensus       298 i~g~~~~~~-----~~~~~~~~ll~~~~~~~~~-~~~~l~~~~~a~~~~~~~~~~gkvvi~~~~  355 (361)
                      +.|+.....     +.++++++++++|++++.+ ++|+|+++++||+.+++++..||+|+.+++
T Consensus       281 i~g~~~~~~~~~~~~~~~~~~~l~~~g~i~~~~~~~~~l~~~~~A~~~~~~~~~~gKvvv~~~~  344 (345)
T 2j3h_A          281 IQGFVVSDFYDKYSKFLEFVLPHIREGKITYVEDVADGLEKAPEALVGLFHGKNVGKQVVVVAR  344 (345)
T ss_dssp             EEECCGGGGGGGHHHHHHHHHHHHHTTSSCCCEEEEESGGGSHHHHHHHHTTCCSSEEEEESSC
T ss_pred             eceeeehhhhhhHHHHHHHHHHHHHCCCCcCcccccCCHHHHHHHHHHHHcCCCceEEEEEeCC
Confidence            999766442     3488999999999999877 589999999999999999988999999864

>1v3u_A Leukotriene B4 12- hydroxydehydrogenase/prostaglandin 15-keto reductase; rossmann fold, riken structural genomics/proteomics initiative, RSGI; 2.00A {Cavia porcellus} SCOP: b.35.1.2 c.2.1.1 PDB: 1v3t_A 1v3v_A* 2dm6_A* 1zsv_A 2y05_A*

Probab=100.00  E-value=4.4e-44  Score=331.41  Aligned_cols=303  Identities=17%  Similarity=0.148  Sum_probs=250.1

Q ss_pred             CCCCcccceeeeeec--CC--CCCccceeeccCCCCCCeEEEEEeeeccCcchHHhHhcCCCCCCCCCcccccccEEEEE
Q 018067            5 PEQEHPKNAFGWAAK--DT--SGVLSPFHFSRRATGEKDVTFKVTHCGICHSDLHMIKNEWGNTIYPIVPGHEIVGVVTE   80 (361)
Q Consensus         5 ~~~~~~~~~~~~~~~--~~--~~~l~~~~~~~p~~~~~evlV~v~~~~i~~~D~~~~~g~~~~~~~p~~lG~e~~G~Vv~   80 (361)
                      |+.+.+|+++.+..+  +.  ++.++++++|.|+|+++||||||+++|||+.|... ..   ...+|.++|||++|+|++
T Consensus         2 ~~~~~~mka~~~~~~~~g~~~~~~l~~~e~~~P~~~~~eVlVkv~a~gi~~~~~~~-~~---~~~~p~~~g~e~~G~Vv~   77 (333)
T 1v3u_A            2 PEFMVKAKSWTLKKHFQGKPTQSDFELKTVELPPLKNGEVLLEALFLSVDPYMRIA-SK---RLKEGAVMMGQQVARVVE   77 (333)
T ss_dssp             --CCCEEEEEEECC-----CCGGGEEEEEEECCCCCTTCEEEEEEEEECCTHHHHH-TT---TCCTTSBCCCCEEEEEEE
T ss_pred             CcccccccEEEEeecCCCCCCccceEEEeCCCCCCCCCEEEEEEEEeccCHHHccc-cC---cCCCCcccccceEEEEEe
Confidence            555567888887664  33  36788899999999999999999999999998732 21   235678999999999999


Q ss_pred             eCCCCCCCCCCCEEEeccccCCCCCCcccccCCCCCCcchhcccccccCCCCcCCCcceeEEeecCCceEECCCC----C
Q 018067           81 VGSKVSKFKVGDKVGVGCMVGSCRSCDSCAIDLENYCPKVIMTYANKYHDGTITYGGYSDIMVADEHFVVRIPEG----T  156 (361)
Q Consensus        81 vG~~v~~~~~GdrV~~~~~~~~c~~c~~c~~~~~~~c~~~~~~~~~~~~~~~~~~g~~a~~v~v~~~~~~~ip~~----~  156 (361)
                      .  ++++|++||||++                                      .|+|+||+.++.++++++|++    +
T Consensus        78 ~--~v~~~~vGdrV~~--------------------------------------~g~~aey~~v~~~~~~~iP~~~~~~~  117 (333)
T 1v3u_A           78 S--KNSAFPAGSIVLA--------------------------------------QSGWTTHFISDGKGLEKLLTEWPDKL  117 (333)
T ss_dssp             E--SCTTSCTTCEEEE--------------------------------------CCCSBSEEEESSTTEEECC--CCTTS
T ss_pred             c--CCCCCCCCCEEEe--------------------------------------cCceEEEEEechHHeEEcCcccccCC
Confidence            5  5788999999973                                      478999999999999999997    8


Q ss_pred             Cccc-ccccchhhhhhhhHhhhcCCCCCCCEEEEEcC-ChHHHHHHHHHHHcCCeEEEEeCCchhHHHHHHHcCCCEEec
Q 018067          157 PLDA-TAPLLCAGITVYSPLRFYGLDKPGMHVGVVGL-GGLGHVAVKFAKAMGVKVTVISTSPSKKSEAIERLGADSFLV  234 (361)
Q Consensus       157 ~~~~-aa~l~~~~~ta~~~l~~~~~~~~g~~vlV~Ga-g~vG~~a~~la~~~g~~vi~~~~~~~~~~~~~~~~g~~~vv~  234 (361)
                      ++++ +|++++++.|||+++.+..++++|++|||+|+ |++|++++|+++..|++|+++++++++.+.+ +++|++.++|
T Consensus       118 ~~~~a~a~l~~~~~ta~~al~~~~~~~~g~~vlV~Ga~ggiG~~~~~~~~~~G~~V~~~~~~~~~~~~~-~~~g~~~~~d  196 (333)
T 1v3u_A          118 PLSLALGTIGMPGLTAYFGLLEVCGVKGGETVLVSAAAGAVGSVVGQIAKLKGCKVVGAAGSDEKIAYL-KQIGFDAAFN  196 (333)
T ss_dssp             CGGGGGTTTSHHHHHHHHHHHTTSCCCSSCEEEEESTTBHHHHHHHHHHHHTTCEEEEEESSHHHHHHH-HHTTCSEEEE
T ss_pred             CHHHHHHHhCChHHHHHHHHHHhhCCCCCCEEEEecCCCcHHHHHHHHHHHCCCEEEEEeCCHHHHHHH-HhcCCcEEEe
Confidence            8888 58999999999999977788999999999998 9999999999999999999999988777666 8899998888


Q ss_pred             CCC-HH---HHHHhc-CCccEEEEcCCCcccHHHHHhccccCCEEEEecCCCC------Cc-ccChHHHHhCCcEEEecc
Q 018067          235 SRD-QD---EMQAAM-GTMDGIIDTVSAVHPLMPLIGLLKSQGKLVLVGAPEK------PL-ELPAFSLLMGRKIVGGSM  302 (361)
Q Consensus       235 ~~~-~~---~~~~~~-~g~d~vid~~g~~~~~~~~~~~l~~~G~~v~~g~~~~------~~-~~~~~~~~~~~~~i~g~~  302 (361)
                      ..+ .+   .+.+.. +++|++||++|... +..++++++++|+++.+|....      .. ..+...++.+++++.|+.
T Consensus       197 ~~~~~~~~~~~~~~~~~~~d~vi~~~g~~~-~~~~~~~l~~~G~~v~~g~~~~~~~~~~~~~~~~~~~~~~~~~~i~g~~  275 (333)
T 1v3u_A          197 YKTVNSLEEALKKASPDGYDCYFDNVGGEF-LNTVLSQMKDFGKIAICGAISVYNRMDQLPPGPSPESIIYKQLRIEGFI  275 (333)
T ss_dssp             TTSCSCHHHHHHHHCTTCEEEEEESSCHHH-HHHHHTTEEEEEEEEECCCCC-------CCBCCCHHHHHHTTCEEEECC
T ss_pred             cCCHHHHHHHHHHHhCCCCeEEEECCChHH-HHHHHHHHhcCCEEEEEeccccccCCCCCCCCcCHHHHhhcCceEEEEe
Confidence            766 33   333433 47999999999876 8999999999999999997643      11 235567888999999987


Q ss_pred             cCC------HHHHHHHHHHHHcCCCceeE-EEEecccHHHHHHHHHcCCCceEEEEEe
Q 018067          303 IGG------MKETQEMIDFAAKHNIRADI-EVIPADYVNTALERLAKADVRYRFVIDV  353 (361)
Q Consensus       303 ~~~------~~~~~~~~~ll~~~~~~~~~-~~~~l~~~~~a~~~~~~~~~~gkvvi~~  353 (361)
                      ...      .+.++++++++++|++++.+ .+++|+++++||+.+++++..||+|+++
T Consensus       276 ~~~~~~~~~~~~~~~~~~l~~~g~l~~~~~~~~~l~~~~~A~~~~~~~~~~gKvvl~~  333 (333)
T 1v3u_A          276 VYRWQGDVREKALRDLMKWVLEGKIQYHEHVTKGFENMPAAFIEMLNGANLGKAVVTA  333 (333)
T ss_dssp             GGGCCTHHHHHHHHHHHHHHHTTSSCCCEEEEECGGGHHHHHHHHHTTCCSBEEEEEC
T ss_pred             hhhcchHHHHHHHHHHHHHHHCCCccCccccccCHHHHHHHHHHHHcCCCCceEEEeC
Confidence            643      35678899999999999876 6789999999999999998889999874

>3slk_A Polyketide synthase extender module 2; rossmann fold, NADPH, oxidoreductase; HET: NDP; 3.00A {Saccharopolyspora spinosa}

Probab=100.00  E-value=4e-45  Score=371.42  Aligned_cols=301  Identities=19%  Similarity=0.217  Sum_probs=253.6

Q ss_pred             eeeeeecCCCCCccceeecc--CCCCCCeEEEEEeeeccCcchHHhHhcCCCCCCCCCcccccccEEEEEeCCCCCCCCC
Q 018067           13 AFGWAAKDTSGVLSPFHFSR--RATGEKDVTFKVTHCGICHSDLHMIKNEWGNTIYPIVPGHEIVGVVTEVGSKVSKFKV   90 (361)
Q Consensus        13 ~~~~~~~~~~~~l~~~~~~~--p~~~~~evlV~v~~~~i~~~D~~~~~g~~~~~~~p~~lG~e~~G~Vv~vG~~v~~~~~   90 (361)
                      .+....++.++.|++++.+.  |+++++||+|||+++|||++|++.+.|.++   .|.++|||++|+|+++|++|++|++
T Consensus       212 ~l~~~~~G~~~~L~~~~~~~p~~~~~~~eVlV~V~a~gin~~D~~~~~G~~~---~~~~lG~E~aG~V~~vG~~V~~~~v  288 (795)
T 3slk_A          212 RLEATRPGSLDGLALVDEPTATAPLGDGEVRIAMRAAGVNFRDALIALGMYP---GVASLGSEGAGVVVETGPGVTGLAP  288 (795)
T ss_dssp             CEEESSTTSSTTEEECCCHHHHSCCCSSEEEEEEEEEEECHHHHHHTTTCCS---SCCCSCCCEEEEEEEECSSCCSSCT
T ss_pred             EEecCCCCCccceEEEeCCccCCCCCCCEEEEEEEEEccCHHHHHHHcCCCC---CCccccceeEEEEEEeCCCCCcCCC
Confidence            34444556677788877664  678999999999999999999999988664   3567999999999999999999999


Q ss_pred             CCEEEeccccCCCCCCcccccCCCCCCcchhcccccccCCCCcCCCcceeEEeecCCceEECCCCCCcccccccchhhhh
Q 018067           91 GDKVGVGCMVGSCRSCDSCAIDLENYCPKVIMTYANKYHDGTITYGGYSDIMVADEHFVVRIPEGTPLDATAPLLCAGIT  170 (361)
Q Consensus        91 GdrV~~~~~~~~c~~c~~c~~~~~~~c~~~~~~~~~~~~~~~~~~g~~a~~v~v~~~~~~~ip~~~~~~~aa~l~~~~~t  170 (361)
                      ||||+.                                    ...|+|+||++++.+.++++|+++++++||++++.+.|
T Consensus       289 GDrV~~------------------------------------~~~G~~ae~~~v~~~~~~~iP~~ls~~~AA~l~~~~~T  332 (795)
T 3slk_A          289 GDRVMG------------------------------------MIPKAFGPLAVADHRMVTRIPAGWSFARAASVPIVFLT  332 (795)
T ss_dssp             TCEEEE------------------------------------CCSSCSSSEEEEETTSEEECCTTCCHHHHHHHHHHHHH
T ss_pred             CCEEEE------------------------------------EecCCCcCEEEeehHHEEECCCCCCHHHHHhhhHHHHH
Confidence            999974                                    24689999999999999999999999999999999999


Q ss_pred             hhhHhhhcCCCCCCCEEEEEcC-ChHHHHHHHHHHHcCCeEEEEeCCchhHHHHHHHcCCCEEecCCCHHH---HHHhcC
Q 018067          171 VYSPLRFYGLDKPGMHVGVVGL-GGLGHVAVKFAKAMGVKVTVISTSPSKKSEAIERLGADSFLVSRDQDE---MQAAMG  246 (361)
Q Consensus       171 a~~~l~~~~~~~~g~~vlV~Ga-g~vG~~a~~la~~~g~~vi~~~~~~~~~~~~~~~~g~~~vv~~~~~~~---~~~~~~  246 (361)
                      ||+++.+.+++++|++|||+|+ |++|++++|+||.+|++|+++++++ +++.+ + +|+++++++++.+.   +.++++
T Consensus       333 a~~al~~~a~l~~G~~VLI~gaaGgvG~~aiqlAk~~Ga~V~~t~~~~-k~~~l-~-lga~~v~~~~~~~~~~~i~~~t~  409 (795)
T 3slk_A          333 AYYALVDLAGLRPGESLLVHSAAGGVGMAAIQLARHLGAEVYATASED-KWQAV-E-LSREHLASSRTCDFEQQFLGATG  409 (795)
T ss_dssp             HHCCCCCCTCCCTTCCEEEESTTBHHHHHHHHHHHHTTCCEEEECCGG-GGGGS-C-SCGGGEECSSSSTHHHHHHHHSC
T ss_pred             HHHHHHHHhCCCCCCEEEEecCCCHHHHHHHHHHHHcCCEEEEEeChH-Hhhhh-h-cChhheeecCChhHHHHHHHHcC
Confidence            9999988889999999999997 9999999999999999999988765 44444 3 89999999887544   444554


Q ss_pred             --CccEEEEcCCCcccHHHHHhccccCCEEEEecCCCCCcccChHHHHhCCcEEEecccCC------HHHHHHHHHHHHc
Q 018067          247 --TMDGIIDTVSAVHPLMPLIGLLKSQGKLVLVGAPEKPLELPAFSLLMGRKIVGGSMIGG------MKETQEMIDFAAK  318 (361)
Q Consensus       247 --g~d~vid~~g~~~~~~~~~~~l~~~G~~v~~g~~~~~~~~~~~~~~~~~~~i~g~~~~~------~~~~~~~~~ll~~  318 (361)
                        |+|+|||++|++. +..++++++++|+++.+|.......... ....+++++.+.....      .+.++++++++++
T Consensus       410 g~GvDvVld~~gg~~-~~~~l~~l~~~Gr~v~iG~~~~~~~~~~-~~~~~~~~~~~~~l~~~~~~~~~~~l~~~~~l~~~  487 (795)
T 3slk_A          410 GRGVDVVLNSLAGEF-ADASLRMLPRGGRFLELGKTDVRDPVEV-ADAHPGVSYQAFDTVEAGPQRIGEMLHELVELFEG  487 (795)
T ss_dssp             SSCCSEEEECCCTTT-THHHHTSCTTCEEEEECCSTTCCCHHHH-HHHSSSEEEEECCGGGGHHHHHHHHHHHHHHHHHT
T ss_pred             CCCeEEEEECCCcHH-HHHHHHHhcCCCEEEEeccccccCcccc-cccCCCCEEEEeeccccCHHHHHHHHHHHHHHHHc
Confidence              7999999999876 8999999999999999997543322221 1234777777765422      2568899999999


Q ss_pred             CCCceeE-EEEecccHHHHHHHHHcCCCceEEEEEeCCcc
Q 018067          319 HNIRADI-EVIPADYVNTALERLAKADVRYRFVIDVANTM  357 (361)
Q Consensus       319 ~~~~~~~-~~~~l~~~~~a~~~~~~~~~~gkvvi~~~~~~  357 (361)
                      |++++.+ ++||++++++||+.+++++..||+|+.+.+.+
T Consensus       488 g~l~p~~~~~~~l~~~~eA~~~l~~g~~~GKvVl~~~~~~  527 (795)
T 3slk_A          488 RVLEPLPVTAWDVRQAPEALRHLSQARHVGKLVLTMPPVW  527 (795)
T ss_dssp             TSCCCCCEEEEEGGGHHHHHHHHHHTCCCBEEEEECCCCC
T ss_pred             CCcCCCcceeEcHHHHHHHHHHHhcCCccceEEEecCccc
Confidence            9999876 89999999999999999999999999997654

>2vz8_A Fatty acid synthase; transferase, phosphopantetheine, multienzyme, megasynthase, fatty acid synthesis; 3.2A {Sus scrofa} PDB: 2vz9_A*

Probab=100.00  E-value=1.6e-33  Score=313.53  Aligned_cols=274  Identities=19%  Similarity=0.234  Sum_probs=226.2

Q ss_pred             CCeEEEEEeeeccCcchHHhHhcCCCCC-------CCCCcccccccEEEEEeCCCCCCCCCCCEEEeccccCCCCCCccc
Q 018067           37 EKDVTFKVTHCGICHSDLHMIKNEWGNT-------IYPIVPGHEIVGVVTEVGSKVSKFKVGDKVGVGCMVGSCRSCDSC  109 (361)
Q Consensus        37 ~~evlV~v~~~~i~~~D~~~~~g~~~~~-------~~p~~lG~e~~G~Vv~vG~~v~~~~~GdrV~~~~~~~~c~~c~~c  109 (361)
                      ++||+|+|.++|+|+.|++...|..+..       ..|.++|+|++|+|.          +||||+.             
T Consensus      1559 ~~eVlVkV~aaglN~~Dv~~~~G~~~~~~~p~~~~~~~~~lG~E~aG~V~----------vGdrV~g------------- 1615 (2512)
T 2vz8_A         1559 CQDRLCSVYYTSLNFRDVMLATGKLSPDSIPGKWLTRDCMLGMEFSGRDA----------SGRRVMG------------- 1615 (2512)
T ss_dssp             HHTTEEEEEEEECCHHHHHHHHTSSCGGGCCSCCSCSSSCCCCEEEEEET----------TSCCEEE-------------
T ss_pred             CCceEEEEEecccCHHHHHHHhCCCccccccccccccCCceEEEEEEEEc----------cCCEEEE-------------
Confidence            7999999999999999999999876422       245689999999873          7999973             


Q ss_pred             ccCCCCCCcchhcccccccCCCCcCCCcceeEEeecCCceEECCCCCCcccccccchhhhhhhhHhhhcCCCCCCCEEEE
Q 018067          110 AIDLENYCPKVIMTYANKYHDGTITYGGYSDIMVADEHFVVRIPEGTPLDATAPLLCAGITVYSPLRFYGLDKPGMHVGV  189 (361)
Q Consensus       110 ~~~~~~~c~~~~~~~~~~~~~~~~~~g~~a~~v~v~~~~~~~ip~~~~~~~aa~l~~~~~ta~~~l~~~~~~~~g~~vlV  189 (361)
                                            ....|+|+||++++++.++++|+++++++||++++.+.|||+++.+.+++++|++|||
T Consensus      1616 ----------------------~~~~G~~Aeyv~vp~~~v~~iPd~ls~~eAA~lp~~~~TA~~al~~~a~l~~Ge~VLI 1673 (2512)
T 2vz8_A         1616 ----------------------MVPAEGLATSVLLLQHATWEVPSTWTLEEAASVPIVYTTAYYSLVVRGRMQPGESVLI 1673 (2512)
T ss_dssp             ----------------------ECSSCCSBSEEECCGGGEEECCTTSCHHHHTTSHHHHHHHHHHHTTTTCCCTTCEEEE
T ss_pred             ----------------------eecCCceeeEEEcccceEEEeCCCCCHHHHHHhHHHHHHHHHHHHHHhcCCCCCEEEE
Confidence                                  2346899999999999999999999999999999999999999988888999999999


Q ss_pred             EcC-ChHHHHHHHHHHHcCCeEEEEeCCchhHHHHHHH---cCCCEEecCCCHHHHH---HhcC--CccEEEEcCCCccc
Q 018067          190 VGL-GGLGHVAVKFAKAMGVKVTVISTSPSKKSEAIER---LGADSFLVSRDQDEMQ---AAMG--TMDGIIDTVSAVHP  260 (361)
Q Consensus       190 ~Ga-g~vG~~a~~la~~~g~~vi~~~~~~~~~~~~~~~---~g~~~vv~~~~~~~~~---~~~~--g~d~vid~~g~~~~  260 (361)
                      +|+ |++|++++|+|+.+|++|+++++++++++.+.+.   +|+++++++++.+...   +.++  |+|+|||++++.. 
T Consensus      1674 ~gaaGgVG~aAiqlAk~~Ga~Viat~~s~~k~~~l~~~~~~lga~~v~~~~~~~~~~~i~~~t~g~GvDvVld~~g~~~- 1752 (2512)
T 2vz8_A         1674 HSGSGGVGQAAIAIALSRGCRVFTTVGSAEKRAYLQARFPQLDETCFANSRDTSFEQHVLRHTAGKGVDLVLNSLAEEK- 1752 (2512)
T ss_dssp             TTTTSHHHHHHHHHHHHTTCEEEEEESCHHHHHHHHHHCTTCCSTTEEESSSSHHHHHHHHTTTSCCEEEEEECCCHHH-
T ss_pred             EeCChHHHHHHHHHHHHcCCEEEEEeCChhhhHHHHhhcCCCCceEEecCCCHHHHHHHHHhcCCCCceEEEECCCchH-
Confidence            986 9999999999999999999999998887777553   6788899988765444   4443  7999999998655 


Q ss_pred             HHHHHhccccCCEEEEecCCCCCc-ccChHHHHhCCcEEEecccCC-----HHHHHHHHHHH----HcCCCceeE-EEEe
Q 018067          261 LMPLIGLLKSQGKLVLVGAPEKPL-ELPAFSLLMGRKIVGGSMIGG-----MKETQEMIDFA----AKHNIRADI-EVIP  329 (361)
Q Consensus       261 ~~~~~~~l~~~G~~v~~g~~~~~~-~~~~~~~~~~~~~i~g~~~~~-----~~~~~~~~~ll----~~~~~~~~~-~~~~  329 (361)
                      +..++++++++|+++.+|...... ......++.+++++.++....     .+.++++++++    .++++++.+ ++||
T Consensus      1753 l~~~l~~L~~~Gr~V~iG~~~~~~~~~~~~~~~~~~~~~~g~~l~~~~~~~~~~~~~~l~~l~~~~~~g~l~p~i~~~f~ 1832 (2512)
T 2vz8_A         1753 LQASVRCLAQHGRFLEIGKFDLSNNHALGMAVFLKNVTFHGILLDSLFEEGGATWQEVSELLKAGIQEGVVQPLKCTVFP 1832 (2512)
T ss_dssp             HHHHHTTEEEEEEEEECCCHHHHTTCEEEGGGGGGCCEEEECCGGGTTSSCCHHHHHHHHHHHHHHTTTCSCCCCEEEEE
T ss_pred             HHHHHHhcCCCcEEEEeecccccccCcccccccccCCcEEEeeHHHHhhhCHHHHHHHHHHHHHHHHcCCcCCCcceEec
Confidence            999999999999999999643111 111234556899999976532     24455555554    467788766 8999


Q ss_pred             cccHHHHHHHHHcCCCceEEEEEeCCc
Q 018067          330 ADYVNTALERLAKADVRYRFVIDVANT  356 (361)
Q Consensus       330 l~~~~~a~~~~~~~~~~gkvvi~~~~~  356 (361)
                      ++++++||+.+++++..||+|+.++++
T Consensus      1833 l~ei~eA~~~l~~g~~~GKvVi~~~~~ 1859 (2512)
T 2vz8_A         1833 RTKVEAAFRYMAQGKHIGKVVIQVREE 1859 (2512)
T ss_dssp             SSTHHHHHHHHHTTCCSSEEEEECSCC
T ss_pred             HHHHHHHHHhhhccCccceEEEECCCc
Confidence            999999999999999889999999754

>1pqw_A Polyketide synthase; rossmann fold, dimer, structural genomics, PSI, protein STRU initiative; 2.66A {Mycobacterium tuberculosis} SCOP: c.2.1.1

Probab=99.86  E-value=8.2e-22  Score=168.24  Aligned_cols=176  Identities=20%  Similarity=0.244  Sum_probs=130.8

Q ss_pred             CceEECCCCCCcccccccchhhhhhhhHhhhcCCCCCCCEEEEEcC-ChHHHHHHHHHHHcCCeEEEEeCCchhHHHHHH
Q 018067          147 HFVVRIPEGTPLDATAPLLCAGITVYSPLRFYGLDKPGMHVGVVGL-GGLGHVAVKFAKAMGVKVTVISTSPSKKSEAIE  225 (361)
Q Consensus       147 ~~~~~ip~~~~~~~aa~l~~~~~ta~~~l~~~~~~~~g~~vlV~Ga-g~vG~~a~~la~~~g~~vi~~~~~~~~~~~~~~  225 (361)
                      ++++++|+++++++||++++++.|||+++.+..++++|++|||+|+ |++|++++++++..|++|+++++++++.+.+ +
T Consensus         2 ~~~~~~P~~~~~~~aa~~~~~~~ta~~~l~~~~~~~~g~~vlV~Ga~ggiG~~~~~~~~~~G~~V~~~~~~~~~~~~~-~   80 (198)
T 1pqw_A            2 DLVVPIPDTLADNEAATFGVAYLTAWHSLCEVGRLSPGERVLIHSATGGVGMAAVSIAKMIGARIYTTAGSDAKREML-S   80 (198)
T ss_dssp             ------------CHHHHHHHHHHHHHHHHHTTSCCCTTCEEEETTTTSHHHHHHHHHHHHHTCEEEEEESSHHHHHHH-H
T ss_pred             CceeECCCCCCHHHHHHhhHHHHHHHHHHHHHhCCCCCCEEEEeeCCChHHHHHHHHHHHcCCEEEEEeCCHHHHHHH-H
Confidence            5688999999999999999999999999987778999999999996 9999999999999999999999987766554 6


Q ss_pred             HcCCCEEecCCCHHH---HHHhc--CCccEEEEcCCCcccHHHHHhccccCCEEEEecCCCC--CcccChHHHHhCCcEE
Q 018067          226 RLGADSFLVSRDQDE---MQAAM--GTMDGIIDTVSAVHPLMPLIGLLKSQGKLVLVGAPEK--PLELPAFSLLMGRKIV  298 (361)
Q Consensus       226 ~~g~~~vv~~~~~~~---~~~~~--~g~d~vid~~g~~~~~~~~~~~l~~~G~~v~~g~~~~--~~~~~~~~~~~~~~~i  298 (361)
                      ++|++.+++..+.+.   +.+..  .++|++||++|... +..++++++++|+++.+|....  ...++.. .+.+++++
T Consensus        81 ~~g~~~~~d~~~~~~~~~~~~~~~~~~~D~vi~~~g~~~-~~~~~~~l~~~G~~v~~g~~~~~~~~~~~~~-~~~~~~~~  158 (198)
T 1pqw_A           81 RLGVEYVGDSRSVDFADEILELTDGYGVDVVLNSLAGEA-IQRGVQILAPGGRFIELGKKDVYADASLGLA-ALAKSASF  158 (198)
T ss_dssp             TTCCSEEEETTCSTHHHHHHHHTTTCCEEEEEECCCTHH-HHHHHHTEEEEEEEEECSCGGGTTTCEEEGG-GGTTTCEE
T ss_pred             HcCCCEEeeCCcHHHHHHHHHHhCCCCCeEEEECCchHH-HHHHHHHhccCCEEEEEcCCCCcCcCcCChh-HhcCCcEE
Confidence            789988888766443   33333  26999999998755 8999999999999999997542  2223332 34688888


Q ss_pred             Eeccc------CC---HHHHHHHHHHHHcCCCceeE
Q 018067          299 GGSMI------GG---MKETQEMIDFAAKHNIRADI  325 (361)
Q Consensus       299 ~g~~~------~~---~~~~~~~~~ll~~~~~~~~~  325 (361)
                      .+...      ..   .+.++++++++++|++++.+
T Consensus       159 ~~~~~~~~~~~~~~~~~~~~~~~~~l~~~g~l~~~~  194 (198)
T 1pqw_A          159 SVVDLDLNLKLQPARYRQLLQHILQHVADGKLEVLP  194 (198)
T ss_dssp             EECCHHHHHHHCHHHHHHHHHHHHHHHHTTSSCCCC
T ss_pred             EEEehHHhhccCHHHHHHHHHHHHHHHHcCCccCCC
Confidence            86422      11   35688999999999998764

>1gpj_A Glutamyl-tRNA reductase; tRNA-dependent tetrapyrrole biosynthesis; HET: GMC CIT; 1.95A {Methanopyrus kandleri} SCOP: a.151.1.1 c.2.1.7 d.58.39.1

Probab=99.15  E-value=6.8e-13  Score=124.98  Aligned_cols=182  Identities=15%  Similarity=0.166  Sum_probs=130.9

Q ss_pred             CcccccccEEEEEeCCCCCCCCCCCEEEeccccCCCCCCcccccCCCCCCcchhcccccccCCCCcCCCcceeEEeecCC
Q 018067           68 IVPGHEIVGVVTEVGSKVSKFKVGDKVGVGCMVGSCRSCDSCAIDLENYCPKVIMTYANKYHDGTITYGGYSDIMVADEH  147 (361)
Q Consensus        68 ~~lG~e~~G~Vv~vG~~v~~~~~GdrV~~~~~~~~c~~c~~c~~~~~~~c~~~~~~~~~~~~~~~~~~g~~a~~v~v~~~  147 (361)
                      ...|+|.++.|.++|++++.+.+|+++++....          .         .+.       .....|++++|+..+..
T Consensus        75 ~~~g~~a~~~i~~v~~Glds~~vGe~~Il~qvk----------~---------~~~-------~~~~~G~~~~~~~~~~~  128 (404)
T 1gpj_A           75 VKRGSEAVRHLFRVASGLESMMVGEQEILRQVK----------K---------AYD-------RAARLGTLDEALKIVFR  128 (404)
T ss_dssp             EEEHHHHHHHHHHHHTTTTSSSTTCHHHHHHHH----------H---------HHH-------HHHHHTCCCHHHHHHHH
T ss_pred             eecCchHhhhheeeccCCCCCcCCcchhHHHHH----------H---------HHH-------HHHHcCCchHHHHHHHH
Confidence            358999999999999999999999997421000          0         000       01234678888888888


Q ss_pred             ceEECCCCCCcccccccchhhhhhhhHhhhcCC---CCCCCEEEEEcCChHHHHHHHHHHHcCC-eEEEEeCCchhHHHH
Q 018067          148 FVVRIPEGTPLDATAPLLCAGITVYSPLRFYGL---DKPGMHVGVVGLGGLGHVAVKFAKAMGV-KVTVISTSPSKKSEA  223 (361)
Q Consensus       148 ~~~~ip~~~~~~~aa~l~~~~~ta~~~l~~~~~---~~~g~~vlV~Gag~vG~~a~~la~~~g~-~vi~~~~~~~~~~~~  223 (361)
                      .++.+|+.++.++++. ..+..++|.++.....   -.+|++|+|+|+|.+|.++++.++..|+ +|++++++.++...+
T Consensus       129 ~a~~~~k~v~~~~~~~-~~~~s~a~~av~~a~~~~~~l~g~~VlIiGaG~iG~~~a~~l~~~G~~~V~v~~r~~~ra~~l  207 (404)
T 1gpj_A          129 RAINLGKRAREETRIS-EGAVSIGSAAVELAERELGSLHDKTVLVVGAGEMGKTVAKSLVDRGVRAVLVANRTYERAVEL  207 (404)
T ss_dssp             HHHHHHHHHHHHSSTT-CSCCSHHHHHHHHHHHHHSCCTTCEEEEESCCHHHHHHHHHHHHHCCSEEEEECSSHHHHHHH
T ss_pred             HHhhhhccCcchhhhc-CCCccHHHHHHHHHHHHhccccCCEEEEEChHHHHHHHHHHHHHCCCCEEEEEeCCHHHHHHH
Confidence            8899999887777654 3455667776643221   1589999999999999999999999999 999999988877677


Q ss_pred             HHHcCCCEEecCCCHHHHHHhcCCccEEEEcCCCcccHH--HHHhc--c--ccCCEEEEecCC
Q 018067          224 IERLGADSFLVSRDQDEMQAAMGTMDGIIDTVSAVHPLM--PLIGL--L--KSQGKLVLVGAP  280 (361)
Q Consensus       224 ~~~~g~~~vv~~~~~~~~~~~~~g~d~vid~~g~~~~~~--~~~~~--l--~~~G~~v~~g~~  280 (361)
                      ++++|++ +++..+   +.+...++|+||++++.+..+.  ..+..  +  ++++.++.++..
T Consensus       208 a~~~g~~-~~~~~~---l~~~l~~aDvVi~at~~~~~~~~~~~l~~~~lk~r~~~~~v~vdia  266 (404)
T 1gpj_A          208 ARDLGGE-AVRFDE---LVDHLARSDVVVSATAAPHPVIHVDDVREALRKRDRRSPILIIDIA  266 (404)
T ss_dssp             HHHHTCE-ECCGGG---HHHHHHTCSEEEECCSSSSCCBCHHHHHHHHHHCSSCCCEEEEECC
T ss_pred             HHHcCCc-eecHHh---HHHHhcCCCEEEEccCCCCceecHHHHHHHHHhccCCCCEEEEEcc
Confidence            7889976 333322   3334458999999998765432  44554  3  567777777654

>2yvl_A TRMI protein, hypothetical protein; tRNA, methyltransferase, S-adenosylmethionine, structural GE NPPSFA; HET: SAM; 2.20A {Aquifex aeolicus}

Probab=99.10  E-value=2e-10  Score=100.62  Aligned_cols=169  Identities=13%  Similarity=0.014  Sum_probs=106.9

Q ss_pred             CCCCCEEEeccc------cCCCCCCcccccCCCCCCcchhcccccccCCCCcCCCcceeEEeecCCceEECCCCCCcc--
Q 018067           88 FKVGDKVGVGCM------VGSCRSCDSCAIDLENYCPKVIMTYANKYHDGTITYGGYSDIMVADEHFVVRIPEGTPLD--  159 (361)
Q Consensus        88 ~~~GdrV~~~~~------~~~c~~c~~c~~~~~~~c~~~~~~~~~~~~~~~~~~g~~a~~v~v~~~~~~~ip~~~~~~--  159 (361)
                      |++||||++.+.      .-.||.|.+|..|..++|......           .|...      ...+++.|+...+.  
T Consensus         4 ~~~Gd~V~~~~~~~~~~~~~~~g~~~~~~~G~~~~~~~~g~~-----------~G~~~------~~~~~~~p~~~~~~~~   66 (248)
T 2yvl_A            4 FKEGEYVLIRFGEKKFLRKLLPKQSLSVKKSVLKFDEVIGKP-----------EGVKI------NGFEVYRPTLEEIILL   66 (248)
T ss_dssp             CCTTCEEEEEETTEEEEEECCTTCEEEETTEEEEGGGTTTCC-----------TTEEE------TTEEEECCCHHHHHHH
T ss_pred             CCCCCEEEEEeCCeEEEEEEcCCCEEecCCceEEHHHhcCCC-----------CCCEE------EEEEEeCCCHHHHHHh
Confidence            899999999762      348899999999888888754211           22222      23333334322111  


Q ss_pred             ---cccccchhhhhhhhHhhhcCCCCCCCEEEEEcCChHHHHHHHHHHHcCCeEEEEeCCchhHHHHHHH---cCC--CE
Q 018067          160 ---ATAPLLCAGITVYSPLRFYGLDKPGMHVGVVGLGGLGHVAVKFAKAMGVKVTVISTSPSKKSEAIER---LGA--DS  231 (361)
Q Consensus       160 ---~aa~l~~~~~ta~~~l~~~~~~~~g~~vlV~Gag~vG~~a~~la~~~g~~vi~~~~~~~~~~~~~~~---~g~--~~  231 (361)
                         ..+..... ..+...+.. ..++++++||.+|+| .|..+.++++. +.+++.++.+++....+.+.   .+.  ..
T Consensus        67 ~~~~~~~~~~~-~~~~~~~~~-~~~~~~~~vldiG~G-~G~~~~~l~~~-~~~v~~vD~~~~~~~~a~~~~~~~~~~~~~  142 (248)
T 2yvl_A           67 GFERKTQIIYP-KDSFYIALK-LNLNKEKRVLEFGTG-SGALLAVLSEV-AGEVWTFEAVEEFYKTAQKNLKKFNLGKNV  142 (248)
T ss_dssp             TSCCSSCCCCH-HHHHHHHHH-TTCCTTCEEEEECCT-TSHHHHHHHHH-SSEEEEECSCHHHHHHHHHHHHHTTCCTTE
T ss_pred             cCcCCCCcccc-hhHHHHHHh-cCCCCCCEEEEeCCC-ccHHHHHHHHh-CCEEEEEecCHHHHHHHHHHHHHcCCCCcE
Confidence               11111112 222234443 447899999999998 69999999998 88999999888765554332   343  11


Q ss_pred             EecCCCHHHHHHh--cCCccEEEEcCCCc-ccHHHHHhccccCCEEEEecC
Q 018067          232 FLVSRDQDEMQAA--MGTMDGIIDTVSAV-HPLMPLIGLLKSQGKLVLVGA  279 (361)
Q Consensus       232 vv~~~~~~~~~~~--~~g~d~vid~~g~~-~~~~~~~~~l~~~G~~v~~g~  279 (361)
                      .+...+..  ...  .+++|+|+...+.. ..+..+.+.|+++|+++....
T Consensus       143 ~~~~~d~~--~~~~~~~~~D~v~~~~~~~~~~l~~~~~~L~~gG~l~~~~~  191 (248)
T 2yvl_A          143 KFFNVDFK--DAEVPEGIFHAAFVDVREPWHYLEKVHKSLMEGAPVGFLLP  191 (248)
T ss_dssp             EEECSCTT--TSCCCTTCBSEEEECSSCGGGGHHHHHHHBCTTCEEEEEES
T ss_pred             EEEEcChh--hcccCCCcccEEEECCcCHHHHHHHHHHHcCCCCEEEEEeC
Confidence            11111211  111  23799999988776 668899999999999998753

>1pjc_A Protein (L-alanine dehydrogenase); oxidoreductase, NAD; HET: NAD; 2.00A {Phormidium lapideum} SCOP: c.2.1.4 c.23.12.2 PDB: 1pjb_A* 1say_A

Probab=99.04  E-value=9.5e-10  Score=101.95  Aligned_cols=135  Identities=18%  Similarity=0.147  Sum_probs=96.9

Q ss_pred             CCEEEEEcCChHHHHHHHHHHHcCCeEEEEeCCchhHHHHHHHcCCCE--EecCCCHHHHHHhcCCccEEEEcCCCccc-
Q 018067          184 GMHVGVVGLGGLGHVAVKFAKAMGVKVTVISTSPSKKSEAIERLGADS--FLVSRDQDEMQAAMGTMDGIIDTVSAVHP-  260 (361)
Q Consensus       184 g~~vlV~Gag~vG~~a~~la~~~g~~vi~~~~~~~~~~~~~~~~g~~~--vv~~~~~~~~~~~~~g~d~vid~~g~~~~-  260 (361)
                      +++|+|+|+|++|+++++.++.+|++|+++++++++.+.+. ++++..  +++.+ .+.+.+...++|+||++++.+.. 
T Consensus       167 ~~~VlViGaGgvG~~aa~~a~~~Ga~V~v~dr~~~r~~~~~-~~~~~~~~~~~~~-~~~~~~~~~~~DvVI~~~~~~~~~  244 (361)
T 1pjc_A          167 PGKVVILGGGVVGTEAAKMAVGLGAQVQIFDINVERLSYLE-TLFGSRVELLYSN-SAEIETAVAEADLLIGAVLVPGRR  244 (361)
T ss_dssp             CCEEEEECCSHHHHHHHHHHHHTTCEEEEEESCHHHHHHHH-HHHGGGSEEEECC-HHHHHHHHHTCSEEEECCCCTTSS
T ss_pred             CCEEEEECCCHHHHHHHHHHHhCCCEEEEEeCCHHHHHHHH-HhhCceeEeeeCC-HHHHHHHHcCCCEEEECCCcCCCC
Confidence            48999999999999999999999999999999988877764 444332  33333 23333333489999999987542 


Q ss_pred             -----HHHHHhccccCCEEEEecCCCC-------CcccChHHHHhCCcEEEecccC------------CHHHHHHHHHHH
Q 018067          261 -----LMPLIGLLKSQGKLVLVGAPEK-------PLELPAFSLLMGRKIVGGSMIG------------GMKETQEMIDFA  316 (361)
Q Consensus       261 -----~~~~~~~l~~~G~~v~~g~~~~-------~~~~~~~~~~~~~~~i~g~~~~------------~~~~~~~~~~ll  316 (361)
                           ....++.++++|.+++++...+       ...++...+..+++++.+....            +...++.+++++
T Consensus       245 ~~~li~~~~~~~~~~g~~ivdv~~~~gg~~e~~~~~~~~~~~~~~~~v~~~~~~~lp~~~~~~~s~~~~~~~~~~l~~l~  324 (361)
T 1pjc_A          245 APILVPASLVEQMRTGSVIVDVAVDQGGCVETLHPTSHTQPTYEVFGVVHYGVPNMPGAVPWTATQALNNSTLPYVVKLA  324 (361)
T ss_dssp             CCCCBCHHHHTTSCTTCEEEETTCTTCCSBTTCCCCCSSSCEEEETTEEEECCSCGGGGCHHHHHHHHHHHHHHHHHHHH
T ss_pred             CCeecCHHHHhhCCCCCEEEEEecCCCCCCccccCCCCCCCEEEECCEEEEEeCCcchhhHHHHHHHHHHHHHHHHHHHH
Confidence                 5678899999999999987543       2234444455688888885431            123457778888


Q ss_pred             HcCC
Q 018067          317 AKHN  320 (361)
Q Consensus       317 ~~~~  320 (361)
                      .+|.
T Consensus       325 ~~G~  328 (361)
T 1pjc_A          325 NQGL  328 (361)
T ss_dssp             HHGG
T ss_pred             hCCc
Confidence            8773

>2eez_A Alanine dehydrogenase; TTHA0216, structural genomic NPPSFA, national project on protein structural and function analyses; 2.71A {Thermus thermophilus}

Probab=99.04  E-value=1.2e-09  Score=101.65  Aligned_cols=138  Identities=16%  Similarity=0.172  Sum_probs=95.4

Q ss_pred             CCCEEEEEcCChHHHHHHHHHHHcCCeEEEEeCCchhHHHHHHHcCCCEEecCCCHHHHHHhcCCccEEEEcCCCcc---
Q 018067          183 PGMHVGVVGLGGLGHVAVKFAKAMGVKVTVISTSPSKKSEAIERLGADSFLVSRDQDEMQAAMGTMDGIIDTVSAVH---  259 (361)
Q Consensus       183 ~g~~vlV~Gag~vG~~a~~la~~~g~~vi~~~~~~~~~~~~~~~~g~~~vv~~~~~~~~~~~~~g~d~vid~~g~~~---  259 (361)
                      ++++|+|+|+|.+|+.+++.++.+|++|+++++++++.+.+.+.+|.....+..+.+.+.+...++|++|++++.+.   
T Consensus       165 ~~~~V~ViGaG~iG~~~a~~l~~~Ga~V~~~d~~~~~~~~~~~~~g~~~~~~~~~~~~l~~~~~~~DvVi~~~g~~~~~~  244 (369)
T 2eez_A          165 APASVVILGGGTVGTNAAKIALGMGAQVTILDVNHKRLQYLDDVFGGRVITLTATEANIKKSVQHADLLIGAVLVPGAKA  244 (369)
T ss_dssp             CCCEEEEECCSHHHHHHHHHHHHTTCEEEEEESCHHHHHHHHHHTTTSEEEEECCHHHHHHHHHHCSEEEECCC------
T ss_pred             CCCEEEEECCCHHHHHHHHHHHhCCCEEEEEECCHHHHHHHHHhcCceEEEecCCHHHHHHHHhCCCEEEECCCCCcccc
Confidence            46899999999999999999999999999999998887777555787643444455555555568999999998653   


Q ss_pred             ---cHHHHHhccccCCEEEEecCCCCC-------cccChHHHHhCCcEEEeccc------------CCHHHHHHHHHHHH
Q 018067          260 ---PLMPLIGLLKSQGKLVLVGAPEKP-------LELPAFSLLMGRKIVGGSMI------------GGMKETQEMIDFAA  317 (361)
Q Consensus       260 ---~~~~~~~~l~~~G~~v~~g~~~~~-------~~~~~~~~~~~~~~i~g~~~------------~~~~~~~~~~~ll~  317 (361)
                         .....++.++++|.++.++...+.       ..++...+..+++++.+...            .+...++.+++++.
T Consensus       245 ~~li~~~~l~~mk~gg~iV~v~~~~gg~~d~~ep~~~~~~~~~~~~v~~~~v~~lp~~~p~~as~~~~~~~~~~l~~l~~  324 (369)
T 2eez_A          245 PKLVTRDMLSLMKEGAVIVDVAVDQGGCVETIRPTTHAEPTYVVDGVVHYGVANMPGAVPRTSTFALTNQTLPYVLKLAE  324 (369)
T ss_dssp             -CCSCHHHHTTSCTTCEEEECC-------------------CEETTEEEECCSCSGGGSHHHHHHHHHHHHHHHHHHHHH
T ss_pred             chhHHHHHHHhhcCCCEEEEEecCCCCCCCcccCCCCCCCEEEECCEEEEeeCCcchhcHHHHHHHHHHHHHHHHHHHHh
Confidence               156788999999999999876432       12232334457788776542            12344677778887


Q ss_pred             cCC
Q 018067          318 KHN  320 (361)
Q Consensus       318 ~~~  320 (361)
                      ++.
T Consensus       325 ~g~  327 (369)
T 2eez_A          325 KGL  327 (369)
T ss_dssp             HTT
T ss_pred             cCh
Confidence            774

>2vhw_A Alanine dehydrogenase; NAD, secreted, oxidoreductase; HET: NAI; 2.0A {Mycobacterium tuberculosis} PDB: 2vhx_A* 2vhy_A 2vhz_A* 2vhv_A* 2voe_A 2voj_A*

Probab=99.02  E-value=7.9e-10  Score=103.01  Aligned_cols=137  Identities=18%  Similarity=0.149  Sum_probs=98.0

Q ss_pred             CCCEEEEEcCChHHHHHHHHHHHcCCeEEEEeCCchhHHHHHHHcCCCEEecCCCHHHHHHhcCCccEEEEcCCCccc--
Q 018067          183 PGMHVGVVGLGGLGHVAVKFAKAMGVKVTVISTSPSKKSEAIERLGADSFLVSRDQDEMQAAMGTMDGIIDTVSAVHP--  260 (361)
Q Consensus       183 ~g~~vlV~Gag~vG~~a~~la~~~g~~vi~~~~~~~~~~~~~~~~g~~~vv~~~~~~~~~~~~~g~d~vid~~g~~~~--  260 (361)
                      +|++|+|+|+|.+|+.+++.++.+|++|++++++.++.+.+.+.+|+....+....+.+.+...++|+||++++.+..  
T Consensus       167 ~g~~V~ViG~G~iG~~~a~~a~~~Ga~V~~~d~~~~~l~~~~~~~g~~~~~~~~~~~~l~~~l~~aDvVi~~~~~p~~~t  246 (377)
T 2vhw_A          167 EPADVVVIGAGTAGYNAARIANGMGATVTVLDINIDKLRQLDAEFCGRIHTRYSSAYELEGAVKRADLVIGAVLVPGAKA  246 (377)
T ss_dssp             CCCEEEEECCSHHHHHHHHHHHHTTCEEEEEESCHHHHHHHHHHTTTSSEEEECCHHHHHHHHHHCSEEEECCCCTTSCC
T ss_pred             CCCEEEEECCCHHHHHHHHHHHhCCCEEEEEeCCHHHHHHHHHhcCCeeEeccCCHHHHHHHHcCCCEEEECCCcCCCCC
Confidence            589999999999999999999999999999999988877775557876333333334444545589999999987653  


Q ss_pred             ----HHHHHhccccCCEEEEecCCCC-------CcccChHHHHhCCcEEEecccCC------------HHHHHHHHHHHH
Q 018067          261 ----LMPLIGLLKSQGKLVLVGAPEK-------PLELPAFSLLMGRKIVGGSMIGG------------MKETQEMIDFAA  317 (361)
Q Consensus       261 ----~~~~~~~l~~~G~~v~~g~~~~-------~~~~~~~~~~~~~~~i~g~~~~~------------~~~~~~~~~ll~  317 (361)
                          ....++.++++|.+++++...+       +..++...+..+++.+.+.....            ...++.+++++.
T Consensus       247 ~~li~~~~l~~mk~g~~iV~va~~~Ggv~e~~ep~~~~~~~~~~~~v~i~~~phl~~~~~~~as~~~~~~~~~~~~~l~~  326 (377)
T 2vhw_A          247 PKLVSNSLVAHMKPGAVLVDIAIDQGGCFEGSRPTTYDHPTFAVHDTLFYCVANMPASVPKTSTYALTNATMPYVLELAD  326 (377)
T ss_dssp             CCCBCHHHHTTSCTTCEEEEGGGGTTCSBTTCCCBCSSSCEEEETTEEEECBTTGGGGSHHHHHHHHHHHHHHHHHHHHH
T ss_pred             cceecHHHHhcCCCCcEEEEEecCCCCccccccCCCCCCCEEEECCEEEEecCCcchhhHHHHHHHHHHHHHHHHHHHHh
Confidence                5778899999999999985432       22233333445778776554321            123466667776


Q ss_pred             cC
Q 018067          318 KH  319 (361)
Q Consensus       318 ~~  319 (361)
                      +|
T Consensus       327 ~g  328 (377)
T 2vhw_A          327 HG  328 (377)
T ss_dssp             HH
T ss_pred             CC
Confidence            66

>1l7d_A Nicotinamide nucleotide transhydrogenase, subunit alpha 1; transhydrogenase domain I, oxidoreductase; 1.81A {Rhodospirillum rubrum} SCOP: c.2.1.4 c.23.12.2 PDB: 1hzz_A* 1f8g_A 1l7e_A* 1u28_A* 1u2d_A* 1u2g_A* 1xlt_A* 2oo5_A* 2oor_A* 2frd_A* 2fsv_A* 1nm5_A* 2fr8_A* 1ptj_A*

Probab=99.00  E-value=2.2e-09  Score=100.31  Aligned_cols=157  Identities=15%  Similarity=0.131  Sum_probs=109.6

Q ss_pred             CCCEEEEEcCChHHHHHHHHHHHcCCeEEEEeCCchhHHHHHHHcCCCEE-ecCCC----------------------HH
Q 018067          183 PGMHVGVVGLGGLGHVAVKFAKAMGVKVTVISTSPSKKSEAIERLGADSF-LVSRD----------------------QD  239 (361)
Q Consensus       183 ~g~~vlV~Gag~vG~~a~~la~~~g~~vi~~~~~~~~~~~~~~~~g~~~v-v~~~~----------------------~~  239 (361)
                      ++++|+|+|+|.+|+.++++|+.+|++|++++++.++.+.+ +++|++.+ ++..+                      .+
T Consensus       171 ~g~~V~ViGaG~iG~~aa~~a~~~Ga~V~~~d~~~~~~~~~-~~~Ga~~~~i~~~~~~~~~~~~~~~~~~s~~~~~~~~~  249 (384)
T 1l7d_A          171 PPARVLVFGVGVAGLQAIATAKRLGAVVMATDVRAATKEQV-ESLGGKFITVDDEAMKTAETAGGYAKEMGEEFRKKQAE  249 (384)
T ss_dssp             CCCEEEEECCSHHHHHHHHHHHHTTCEEEEECSCSTTHHHH-HHTTCEECCC-----------------------CCHHH
T ss_pred             CCCEEEEECCCHHHHHHHHHHHHCCCEEEEEeCCHHHHHHH-HHcCCeEEeecccccccccccccchhhcCHHHHhhhHH
Confidence            68999999999999999999999999999999888776666 56998654 22211                      12


Q ss_pred             HHHHhcCCccEEEEcC---CCc--cc-HHHHHhccccCCEEEEecCCC-CCcc--cChHHHHhCCcEEEecccCCHHHHH
Q 018067          240 EMQAAMGTMDGIIDTV---SAV--HP-LMPLIGLLKSQGKLVLVGAPE-KPLE--LPAFSLLMGRKIVGGSMIGGMKETQ  310 (361)
Q Consensus       240 ~~~~~~~g~d~vid~~---g~~--~~-~~~~~~~l~~~G~~v~~g~~~-~~~~--~~~~~~~~~~~~i~g~~~~~~~~~~  310 (361)
                      .+.+...++|+||+++   |.+  .. ....++.+++++.++.++... +.+.  .+...+..+++++.++.....+...
T Consensus       250 ~l~~~~~~aDvVi~~~~~pg~~~~~li~~~~l~~mk~g~vivdva~~~gg~~~~~~~~~~~~~~~v~i~g~~~~p~~~~~  329 (384)
T 1l7d_A          250 AVLKELVKTDIAITTALIPGKPAPVLITEEMVTKMKPGSVIIDLAVEAGGNCPLSEPGKIVVKHGVKIVGHTNVPSRVAA  329 (384)
T ss_dssp             HHHHHHTTCSEEEECCCCTTSCCCCCSCHHHHTTSCTTCEEEETTGGGTCSSTTCCTTCEEEETTEEEECCSSGGGGGHH
T ss_pred             HHHHHhCCCCEEEECCccCCCCCCeeeCHHHHhcCCCCCEEEEEecCCCCCeecccCCcEEEECCEEEEEeCCCcchhHH
Confidence            2445556899999999   532  22 367899999999999998643 2322  2333456688999998776555566


Q ss_pred             HHHHHHHcCCCceeE---E----EEecccHHHHHHHH
Q 018067          311 EMIDFAAKHNIRADI---E----VIPADYVNTALERL  340 (361)
Q Consensus       311 ~~~~ll~~~~~~~~~---~----~~~l~~~~~a~~~~  340 (361)
                      ++.+++.++.+....   .    .+.++.-.+.++..
T Consensus       330 ~a~~l~~~~~~~~~~~~~~~~~~~~~~~~~d~~~~~~  366 (384)
T 1l7d_A          330 DASPLFAKNLLNFLTPHVDKDTKTLVMKLEDETVSGT  366 (384)
T ss_dssp             HHHHHHHHHHHHHHGGGEETTTTEECCCTTCHHHHHH
T ss_pred             HHHHHHHHhHHHHHHHHHhCCcchhhccccCHHHhcC
Confidence            688888887654321   1    34444445555544

>3ce6_A Adenosylhomocysteinase; protein-substrate complex, dimer of dimers, NAD binding DOMA amino acid insertional region, hydrolase; HET: ADN NAD; 1.60A {Mycobacterium tuberculosis} PDB: 3dhy_A* 2zj0_A* 2ziz_A* 2zj1_A*

Probab=98.88  E-value=4e-10  Score=107.60  Aligned_cols=173  Identities=18%  Similarity=0.151  Sum_probs=116.3

Q ss_pred             hhhhhhhHhhhcC-CCCCCCEEEEEcCChHHHHHHHHHHHcCCeEEEEeCCchhHHHHHHHcCCCEEecCCCHHHHHHhc
Q 018067          167 AGITVYSPLRFYG-LDKPGMHVGVVGLGGLGHVAVKFAKAMGVKVTVISTSPSKKSEAIERLGADSFLVSRDQDEMQAAM  245 (361)
Q Consensus       167 ~~~ta~~~l~~~~-~~~~g~~vlV~Gag~vG~~a~~la~~~g~~vi~~~~~~~~~~~~~~~~g~~~vv~~~~~~~~~~~~  245 (361)
                      ...++|+++.+.. ...+|++|+|+|.|.+|+.+++.++.+|++|+++++++++...+ +++|++ +++   .   .++.
T Consensus       256 ~~~s~~~g~~r~~~~~l~GktV~IiG~G~IG~~~A~~lka~Ga~Viv~d~~~~~~~~A-~~~Ga~-~~~---l---~e~l  327 (494)
T 3ce6_A          256 TRHSLIDGINRGTDALIGGKKVLICGYGDVGKGCAEAMKGQGARVSVTEIDPINALQA-MMEGFD-VVT---V---EEAI  327 (494)
T ss_dssp             HHHHHHHHHHHHHCCCCTTCEEEEECCSHHHHHHHHHHHHTTCEEEEECSCHHHHHHH-HHTTCE-ECC---H---HHHG
T ss_pred             hhhhhhHHHHhccCCCCCcCEEEEEccCHHHHHHHHHHHHCCCEEEEEeCCHHHHHHH-HHcCCE-Eec---H---HHHH
Confidence            3455676665433 25789999999999999999999999999999998887765444 678885 222   1   2334


Q ss_pred             CCccEEEEcCCCcccHH-HHHhccccCCEEEEecCCCCCcccChHHHHhCCc---EEEecccC-CHHHHHHHHHHHHcCC
Q 018067          246 GTMDGIIDTVSAVHPLM-PLIGLLKSQGKLVLVGAPEKPLELPAFSLLMGRK---IVGGSMIG-GMKETQEMIDFAAKHN  320 (361)
Q Consensus       246 ~g~d~vid~~g~~~~~~-~~~~~l~~~G~~v~~g~~~~~~~~~~~~~~~~~~---~i~g~~~~-~~~~~~~~~~ll~~~~  320 (361)
                      .++|+|++++|....+. ..++.++++|+++.+|....  .++...+..+.+   +|.+.... ...++...+.++.+++
T Consensus       328 ~~aDvVi~atgt~~~i~~~~l~~mk~ggilvnvG~~~~--eId~~aL~~~aL~~~~I~~~ldv~~~~~~~~~l~LL~~gr  405 (494)
T 3ce6_A          328 GDADIVVTATGNKDIIMLEHIKAMKDHAILGNIGHFDN--EIDMAGLERSGATRVNVKPQVDLWTFGDTGRSIIVLSEGR  405 (494)
T ss_dssp             GGCSEEEECSSSSCSBCHHHHHHSCTTCEEEECSSSGG--GBCHHHHHHTTCEEEEEETTEEEEECTTTCCEEEEEGGGS
T ss_pred             hCCCEEEECCCCHHHHHHHHHHhcCCCcEEEEeCCCCC--ccCHHHHHHhhhccceEEEEEEEeecCCcchHHHHHhCCC
Confidence            57999999999877666 78899999999999997542  355555555444   55543321 1111122333455555


Q ss_pred             Cc------eeE-----EEEecccHHHHHHHHHcCCCceEEE
Q 018067          321 IR------ADI-----EVIPADYVNTALERLAKADVRYRFV  350 (361)
Q Consensus       321 ~~------~~~-----~~~~l~~~~~a~~~~~~~~~~gkvv  350 (361)
                      +.      +.+     +.+ ++++.++++.+.+++..++.|
T Consensus       406 lvnL~~~TPH~a~~~~~s~-~~qa~~ai~~~~~g~~~~~~V  445 (494)
T 3ce6_A          406 LLNLGNATGHPSFVMSNSF-ANQTIAQIELWTKNDEYDNEV  445 (494)
T ss_dssp             CHHHHHSCCSCHHHHHHHH-HHHHHHHHHHHHTGGGCCSSE
T ss_pred             EEeccCCCCCccccchHHH-HHHHHHHHHHHHcCCCCCCEE
Confidence            53      111     224 568888888888766554444

>1x13_A NAD(P) transhydrogenase subunit alpha; NAD(H)-binding domain, rossmann fold, oxidoreductase; 1.90A {Escherichia coli} PDB: 1x14_A* 1x15_A* 2bru_A*

Probab=98.85  E-value=1.4e-08  Score=95.09  Aligned_cols=138  Identities=18%  Similarity=0.156  Sum_probs=95.7

Q ss_pred             CCCEEEEEcCChHHHHHHHHHHHcCCeEEEEeCCchhHHHHHHHcCCCEEe-cCC-------------CHH-------HH
Q 018067          183 PGMHVGVVGLGGLGHVAVKFAKAMGVKVTVISTSPSKKSEAIERLGADSFL-VSR-------------DQD-------EM  241 (361)
Q Consensus       183 ~g~~vlV~Gag~vG~~a~~la~~~g~~vi~~~~~~~~~~~~~~~~g~~~vv-~~~-------------~~~-------~~  241 (361)
                      ++++|+|+|+|.+|+.++++|+.+|++|++++++.++.+.+ +++|++.+. +..             ..+       .+
T Consensus       171 ~g~~V~ViGaG~iG~~aa~~a~~~Ga~V~v~D~~~~~~~~~-~~lGa~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~l  249 (401)
T 1x13_A          171 PPAKVMVIGAGVAGLAAIGAANSLGAIVRAFDTRPEVKEQV-QSMGAEFLELDFKEEAGSGDGYAKVMSDAFIKAEMELF  249 (401)
T ss_dssp             CCCEEEEECCSHHHHHHHHHHHHTTCEEEEECSCGGGHHHH-HHTTCEECCC--------CCHHHHHHSHHHHHHHHHHH
T ss_pred             CCCEEEEECCCHHHHHHHHHHHHCCCEEEEEcCCHHHHHHH-HHcCCEEEEecccccccccccchhhccHHHHHHHHHHH
Confidence            58999999999999999999999999999999988877666 778886432 111             111       23


Q ss_pred             HHhcCCccEEEEcCCCc-----ccH-HHHHhccccCCEEEEecCC-CCCcccCh-HH--HHhCCcEEEecccCCHHHHHH
Q 018067          242 QAAMGTMDGIIDTVSAV-----HPL-MPLIGLLKSQGKLVLVGAP-EKPLELPA-FS--LLMGRKIVGGSMIGGMKETQE  311 (361)
Q Consensus       242 ~~~~~g~d~vid~~g~~-----~~~-~~~~~~l~~~G~~v~~g~~-~~~~~~~~-~~--~~~~~~~i~g~~~~~~~~~~~  311 (361)
                      .+...++|+||++++.+     ..+ ...++.+++++.+++++.. ++.+.++. ..  +..+++++.|+.....+...+
T Consensus       250 ~e~~~~aDvVI~~~~~pg~~ap~li~~~~l~~mk~g~vIVdva~~~Gg~v~~~~~~~p~~~~~gv~i~g~~~~p~~~~~~  329 (401)
T 1x13_A          250 AAQAKEVDIIVTTALIPGKPAPKLITREMVDSMKAGSVIVDLAAQNGGNCEYTVPGEIFTTENGVKVIGYTDLPGRLPTQ  329 (401)
T ss_dssp             HHHHHHCSEEEECCCCTTSCCCCCBCHHHHHTSCTTCEEEETTGGGTCSBTTCCTTSEEECTTSCEEECCSCTGGGSHHH
T ss_pred             HHHhCCCCEEEECCccCCCCCCeeeCHHHHhcCCCCcEEEEEcCCCCCCcCcccCCCceEEECCEEEEeeCCCcccCHHH
Confidence            44445799999995331     223 5789999999999999964 33344332 12  456889999987654332233


Q ss_pred             HHHHHHcCCC
Q 018067          312 MIDFAAKHNI  321 (361)
Q Consensus       312 ~~~ll~~~~~  321 (361)
                      +.+++.++.+
T Consensus       330 a~~ll~~~~~  339 (401)
T 1x13_A          330 SSQLYGTNLV  339 (401)
T ss_dssp             HHHHHHHHHH
T ss_pred             HHHHHHHhHH
Confidence            6566555543

>3oj0_A Glutr, glutamyl-tRNA reductase; structural genomics, PSI-2, protein structure initiative, MI center for structural genomics, MCSG; HET: MSE SO4; 1.65A {Thermoplasma volcanium}

Probab=98.63  E-value=6.6e-08  Score=77.26  Aligned_cols=106  Identities=18%  Similarity=0.138  Sum_probs=79.6

Q ss_pred             hhhhhHhhhcCCCCCCCEEEEEcCChHHHHHHHHHHHcCCeEEEEeCCchhHHHHHHHcCCCEEecCCCHHHHHHhcCCc
Q 018067          169 ITVYSPLRFYGLDKPGMHVGVVGLGGLGHVAVKFAKAMGVKVTVISTSPSKKSEAIERLGADSFLVSRDQDEMQAAMGTM  248 (361)
Q Consensus       169 ~ta~~~l~~~~~~~~g~~vlV~Gag~vG~~a~~la~~~g~~vi~~~~~~~~~~~~~~~~g~~~vv~~~~~~~~~~~~~g~  248 (361)
                      ..++.+++.... ..+++|+|+|+|.+|.++++.++..|++|++.+++.++.+.++++++.+.. ...+.   .+...++
T Consensus         7 sv~~~a~~~~~~-~~~~~v~iiG~G~iG~~~a~~l~~~g~~v~v~~r~~~~~~~~a~~~~~~~~-~~~~~---~~~~~~~   81 (144)
T 3oj0_A            7 SIPSIVYDIVRK-NGGNKILLVGNGMLASEIAPYFSYPQYKVTVAGRNIDHVRAFAEKYEYEYV-LINDI---DSLIKNN   81 (144)
T ss_dssp             SHHHHHHHHHHH-HCCCEEEEECCSHHHHHHGGGCCTTTCEEEEEESCHHHHHHHHHHHTCEEE-ECSCH---HHHHHTC
T ss_pred             cHHHHHHHHHHh-ccCCEEEEECCCHHHHHHHHHHHhCCCEEEEEcCCHHHHHHHHHHhCCceE-eecCH---HHHhcCC
Confidence            344556655443 458999999999999999999988999999999999888888888886432 33332   2233479


Q ss_pred             cEEEEcCCCcccHHHHHhccccCCEEEEecCC
Q 018067          249 DGIIDTVSAVHPLMPLIGLLKSQGKLVLVGAP  280 (361)
Q Consensus       249 d~vid~~g~~~~~~~~~~~l~~~G~~v~~g~~  280 (361)
                      |+||++++....+. ....+++++.++.++.+
T Consensus        82 Divi~at~~~~~~~-~~~~l~~g~~vid~~~p  112 (144)
T 3oj0_A           82 DVIITATSSKTPIV-EERSLMPGKLFIDLGNP  112 (144)
T ss_dssp             SEEEECSCCSSCSB-CGGGCCTTCEEEECCSS
T ss_pred             CEEEEeCCCCCcEe-eHHHcCCCCEEEEccCC
Confidence            99999999875332 23778899999999875

>4dio_A NAD(P) transhydrogenase subunit alpha PART 1; structural genomics, PSI-biology, NEW YORK structural genomi research consortium, nysgrc; 2.60A {Sinorhizobium meliloti}

Probab=98.54  E-value=6.6e-07  Score=82.97  Aligned_cols=135  Identities=19%  Similarity=0.181  Sum_probs=92.3

Q ss_pred             CCCEEEEEcCChHHHHHHHHHHHcCCeEEEEeCCchhHHHHHHHcCCCEEec-------------CCC----------HH
Q 018067          183 PGMHVGVVGLGGLGHVAVKFAKAMGVKVTVISTSPSKKSEAIERLGADSFLV-------------SRD----------QD  239 (361)
Q Consensus       183 ~g~~vlV~Gag~vG~~a~~la~~~g~~vi~~~~~~~~~~~~~~~~g~~~vv~-------------~~~----------~~  239 (361)
                      ++.+|+|+|+|.+|+.++++|+.+|++|++.+++.++++.+ +++|++.+..             +..          .+
T Consensus       189 ~~~kV~ViG~G~iG~~aa~~a~~lGa~V~v~D~~~~~l~~~-~~~G~~~~~~~~~~~~d~~~~~~ya~e~s~~~~~~~~~  267 (405)
T 4dio_A          189 PAAKIFVMGAGVAGLQAIATARRLGAVVSATDVRPAAKEQV-ASLGAKFIAVEDEEFKAAETAGGYAKEMSGEYQVKQAA  267 (405)
T ss_dssp             CCCEEEEECCSHHHHHHHHHHHHTTCEEEEECSSTTHHHHH-HHTTCEECCCCC-----------------CHHHHHHHH
T ss_pred             CCCEEEEECCcHHHHHHHHHHHHCCCEEEEEcCCHHHHHHH-HHcCCceeecccccccccccccchhhhcchhhhhhhHh
Confidence            67899999999999999999999999999999998887666 5688753211             110          12


Q ss_pred             HHHHhcCCccEEEEcCCCc-----c-cHHHHHhccccCCEEEEecCCC-CCcccC--hHHHHhCCcEEEecccCCHHHHH
Q 018067          240 EMQAAMGTMDGIIDTVSAV-----H-PLMPLIGLLKSQGKLVLVGAPE-KPLELP--AFSLLMGRKIVGGSMIGGMKETQ  310 (361)
Q Consensus       240 ~~~~~~~g~d~vid~~g~~-----~-~~~~~~~~l~~~G~~v~~g~~~-~~~~~~--~~~~~~~~~~i~g~~~~~~~~~~  310 (361)
                      .+.+...++|+||.++..+     . .-...++.+++++.+++++... +.+..+  ...+..+++++.+......+...
T Consensus       268 ~l~e~l~~aDVVI~tvlipg~~ap~Lvt~emv~~Mk~GsVIVDvA~d~GG~~e~t~~~~~~~~~GV~~~gv~nlP~~vp~  347 (405)
T 4dio_A          268 LVAEHIAKQDIVITTALIPGRPAPRLVTREMLDSMKPGSVVVDLAVERGGNIEGAEAGKVTEVGGVRIVGHLNVAGRIAA  347 (405)
T ss_dssp             HHHHHHHTCSEEEECCCCSSSCCCCCBCHHHHTTSCTTCEEEETTGGGTCSBTTCCTTEEEEETTEEEEECSSGGGGGHH
T ss_pred             HHHHHhcCCCEEEECCcCCCCCCCEEecHHHHhcCCCCCEEEEEeCCCCCCccccCCCCeEEECCEEEEEeCCCCccCHH
Confidence            3334445899999996432     1 2468999999999999998633 333332  11234578889988775543333


Q ss_pred             HHHHHHHc
Q 018067          311 EMIDFAAK  318 (361)
Q Consensus       311 ~~~~ll~~  318 (361)
                      ..-+++.+
T Consensus       348 tAS~~ls~  355 (405)
T 4dio_A          348 SASLLYAK  355 (405)
T ss_dssp             HHHHHHHH
T ss_pred             HHHHHHHH
Confidence            44333333

>3p2y_A Alanine dehydrogenase/pyridine nucleotide transhy; seattle structural genomics center for infectious disease, S tuberculosis; 1.82A {Mycobacterium smegmatis str}

Probab=98.46  E-value=7.5e-07  Score=81.93  Aligned_cols=123  Identities=17%  Similarity=0.155  Sum_probs=87.6

Q ss_pred             CCCEEEEEcCChHHHHHHHHHHHcCCeEEEEeCCchhHHHHHHHcCCCEEec---------CC----------CHHHHHH
Q 018067          183 PGMHVGVVGLGGLGHVAVKFAKAMGVKVTVISTSPSKKSEAIERLGADSFLV---------SR----------DQDEMQA  243 (361)
Q Consensus       183 ~g~~vlV~Gag~vG~~a~~la~~~g~~vi~~~~~~~~~~~~~~~~g~~~vv~---------~~----------~~~~~~~  243 (361)
                      ++.+|+|+|+|.+|+.+++.|+.+|++|++++++.++++.+ +++|++.+..         +.          ..+.+.+
T Consensus       183 ~~~kV~ViG~G~iG~~aa~~a~~lGa~V~v~D~~~~~l~~~-~~lGa~~~~l~~~~~~~~gya~~~~~~~~~~~~~~l~e  261 (381)
T 3p2y_A          183 KPASALVLGVGVAGLQALATAKRLGAKTTGYDVRPEVAEQV-RSVGAQWLDLGIDAAGEGGYARELSEAERAQQQQALED  261 (381)
T ss_dssp             CCCEEEEESCSHHHHHHHHHHHHHTCEEEEECSSGGGHHHH-HHTTCEECCCC-------------CHHHHHHHHHHHHH
T ss_pred             CCCEEEEECchHHHHHHHHHHHHCCCEEEEEeCCHHHHHHH-HHcCCeEEeccccccccccchhhhhHHHHhhhHHHHHH
Confidence            67899999999999999999999999999999999887777 5688753210         00          1123444


Q ss_pred             hcCCccEEEEcCCCc-----c-cHHHHHhccccCCEEEEecCCCC-CcccC--hHHHHhCCcEEEecccCCH
Q 018067          244 AMGTMDGIIDTVSAV-----H-PLMPLIGLLKSQGKLVLVGAPEK-PLELP--AFSLLMGRKIVGGSMIGGM  306 (361)
Q Consensus       244 ~~~g~d~vid~~g~~-----~-~~~~~~~~l~~~G~~v~~g~~~~-~~~~~--~~~~~~~~~~i~g~~~~~~  306 (361)
                      ...++|+||.++..+     . .....++.+++++.+++++...+ .+..+  ...+..+++++.+......
T Consensus       262 ~l~~aDIVI~tv~iPg~~ap~Lvt~emv~~MkpGsVIVDvA~d~GG~~e~t~~~~~~~~~gV~~~~v~nlP~  333 (381)
T 3p2y_A          262 AITKFDIVITTALVPGRPAPRLVTAAAATGMQPGSVVVDLAGETGGNCELTEPGRTIVHHGVTITSPLNLPA  333 (381)
T ss_dssp             HHTTCSEEEECCCCTTSCCCCCBCHHHHHTSCTTCEEEETTGGGTCSBTTCCTTCEEEETTEEEECCSCTGG
T ss_pred             HHhcCCEEEECCCCCCcccceeecHHHHhcCCCCcEEEEEeCCCCCccccccCCCeEEECCEEEEeeCCCch
Confidence            556899999986332     1 24789999999999999986543 33321  1123446788888766443

>3d4o_A Dipicolinate synthase subunit A; NP_243269.1, structural GEN joint center for structural genomics, JCSG, protein structu initiative, PSI-2; HET: MSE TAR; 2.10A {Bacillus halodurans}

Probab=98.29  E-value=2.6e-05  Score=69.88  Aligned_cols=112  Identities=16%  Similarity=0.164  Sum_probs=81.9

Q ss_pred             CCCCEEEEEcCChHHHHHHHHHHHcCCeEEEEeCCchhHHHHHHHcCCCEEecCCCHHHHHHhcCCccEEEEcCCCcccH
Q 018067          182 KPGMHVGVVGLGGLGHVAVKFAKAMGVKVTVISTSPSKKSEAIERLGADSFLVSRDQDEMQAAMGTMDGIIDTVSAVHPL  261 (361)
Q Consensus       182 ~~g~~vlV~Gag~vG~~a~~la~~~g~~vi~~~~~~~~~~~~~~~~g~~~vv~~~~~~~~~~~~~g~d~vid~~g~~~~~  261 (361)
                      -.|++|+|+|.|.+|..+++.++.+|++|++.+++.++...+ +++|+.. ++.   +.+.++...+|+|+.++.....-
T Consensus       153 l~g~~v~IiG~G~iG~~~a~~l~~~G~~V~~~dr~~~~~~~~-~~~g~~~-~~~---~~l~~~l~~aDvVi~~~p~~~i~  227 (293)
T 3d4o_A          153 IHGANVAVLGLGRVGMSVARKFAALGAKVKVGARESDLLARI-AEMGMEP-FHI---SKAAQELRDVDVCINTIPALVVT  227 (293)
T ss_dssp             STTCEEEEECCSHHHHHHHHHHHHTTCEEEEEESSHHHHHHH-HHTTSEE-EEG---GGHHHHTTTCSEEEECCSSCCBC
T ss_pred             CCCCEEEEEeeCHHHHHHHHHHHhCCCEEEEEECCHHHHHHH-HHCCCee-cCh---hhHHHHhcCCCEEEECCChHHhC
Confidence            478999999999999999999999999999999987765544 4677653 222   23445557899999999865434


Q ss_pred             HHHHhccccCCEEEEecCCCCCcccChHHHHhCCcEEEe
Q 018067          262 MPLIGLLKSQGKLVLVGAPEKPLELPAFSLLMGRKIVGG  300 (361)
Q Consensus       262 ~~~~~~l~~~G~~v~~g~~~~~~~~~~~~~~~~~~~i~g  300 (361)
                      ...++.+++++.++.++..+....+  .....+++.+..
T Consensus       228 ~~~l~~mk~~~~lin~ar~~~~~~~--~~a~~~Gv~~~~  264 (293)
T 3d4o_A          228 ANVLAEMPSHTFVIDLASKPGGTDF--RYAEKRGIKALL  264 (293)
T ss_dssp             HHHHHHSCTTCEEEECSSTTCSBCH--HHHHHHTCEEEE
T ss_pred             HHHHHhcCCCCEEEEecCCCCCCCH--HHHHHCCCEEEE
Confidence            5678889999999999864433333  333334555543

>3ic5_A Putative saccharopine dehydrogenase; structural genomics, APC63807.2, N-terminal domain, saccharo dehydrogenase, PSI-2; HET: MSE; 2.08A {Ruegeria pomeroyi}

Probab=98.26  E-value=8.3e-06  Score=62.05  Aligned_cols=94  Identities=17%  Similarity=0.247  Sum_probs=69.0

Q ss_pred             CCCEEEEEcCChHHHHHHHHHHHcC-CeEEEEeCCchhHHHHHHHcCCCE-EecCCCHHHHHHhcCCccEEEEcCCCccc
Q 018067          183 PGMHVGVVGLGGLGHVAVKFAKAMG-VKVTVISTSPSKKSEAIERLGADS-FLVSRDQDEMQAAMGTMDGIIDTVSAVHP  260 (361)
Q Consensus       183 ~g~~vlV~Gag~vG~~a~~la~~~g-~~vi~~~~~~~~~~~~~~~~g~~~-vv~~~~~~~~~~~~~g~d~vid~~g~~~~  260 (361)
                      .+.+|+|+|+|.+|..+++.+...| .+|+++++++++...+ ...+... ..+..+.+.+.+...++|+||++++....
T Consensus         4 ~~~~v~I~G~G~iG~~~~~~l~~~g~~~v~~~~r~~~~~~~~-~~~~~~~~~~d~~~~~~~~~~~~~~d~vi~~~~~~~~   82 (118)
T 3ic5_A            4 MRWNICVVGAGKIGQMIAALLKTSSNYSVTVADHDLAALAVL-NRMGVATKQVDAKDEAGLAKALGGFDAVISAAPFFLT   82 (118)
T ss_dssp             TCEEEEEECCSHHHHHHHHHHHHCSSEEEEEEESCHHHHHHH-HTTTCEEEECCTTCHHHHHHHTTTCSEEEECSCGGGH
T ss_pred             CcCeEEEECCCHHHHHHHHHHHhCCCceEEEEeCCHHHHHHH-HhCCCcEEEecCCCHHHHHHHHcCCCEEEECCCchhh
Confidence            4568999999999999999999999 7999999988776666 3455543 34556667777777799999999987653


Q ss_pred             HHHHHhccccCCEEEEe
Q 018067          261 LMPLIGLLKSQGKLVLV  277 (361)
Q Consensus       261 ~~~~~~~l~~~G~~v~~  277 (361)
                      ......+.+.+-.++.+
T Consensus        83 ~~~~~~~~~~g~~~~~~   99 (118)
T 3ic5_A           83 PIIAKAAKAAGAHYFDL   99 (118)
T ss_dssp             HHHHHHHHHTTCEEECC
T ss_pred             HHHHHHHHHhCCCEEEe
Confidence            33333444555555554

>4fgs_A Probable dehydrogenase protein; PSI-biology, nysgrc, structural genomics, NEW YORK structura genomics research consortium, three layer; 1.76A {Rhizobium etli}

Probab=98.20  E-value=1.1e-05  Score=71.38  Aligned_cols=99  Identities=20%  Similarity=0.250  Sum_probs=78.0

Q ss_pred             CCCCEEEEEcC-ChHHHHHHHHHHHcCCeEEEEeCCchhHHHHHHHcCCCE---EecCCCHHHHHHh-------cCCccE
Q 018067          182 KPGMHVGVVGL-GGLGHVAVKFAKAMGVKVTVISTSPSKKSEAIERLGADS---FLVSRDQDEMQAA-------MGTMDG  250 (361)
Q Consensus       182 ~~g~~vlV~Ga-g~vG~~a~~la~~~g~~vi~~~~~~~~~~~~~~~~g~~~---vv~~~~~~~~~~~-------~~g~d~  250 (361)
                      -+|+++||.|+ +++|.++++.+...|++|++++++.++.++.++++|...   ..|-.+++.++++       .++.|+
T Consensus        27 L~gKvalVTGas~GIG~aiA~~la~~Ga~V~i~~r~~~~l~~~~~~~g~~~~~~~~Dv~~~~~v~~~~~~~~~~~G~iDi  106 (273)
T 4fgs_A           27 LNAKIAVITGATSGIGLAAAKRFVAEGARVFITGRRKDVLDAAIAEIGGGAVGIQADSANLAELDRLYEKVKAEAGRIDV  106 (273)
T ss_dssp             TTTCEEEEESCSSHHHHHHHHHHHHTTCEEEEEESCHHHHHHHHHHHCTTCEEEECCTTCHHHHHHHHHHHHHHHSCEEE
T ss_pred             hCCCEEEEeCcCCHHHHHHHHHHHHCCCEEEEEECCHHHHHHHHHHcCCCeEEEEecCCCHHHHHHHHHHHHHHcCCCCE
Confidence            47899999997 999999999999999999999999999988888988642   2355555443332       257999


Q ss_pred             EEEcCCCcc-------------------------cHHHHHhccccCCEEEEecCC
Q 018067          251 IIDTVSAVH-------------------------PLMPLIGLLKSQGKLVLVGAP  280 (361)
Q Consensus       251 vid~~g~~~-------------------------~~~~~~~~l~~~G~~v~~g~~  280 (361)
                      .++++|...                         ..+.++..++++|++|.+++.
T Consensus       107 LVNNAG~~~~~~~~~~~~e~w~~~~~vNl~g~~~~~~~~~p~m~~~G~IInisS~  161 (273)
T 4fgs_A          107 LFVNAGGGSMLPLGEVTEEQYDDTFDRNVKGVLFTVQKALPLLARGSSVVLTGST  161 (273)
T ss_dssp             EEECCCCCCCCCTTSCCHHHHHHHHHHHTHHHHHHHHHHTTTEEEEEEEEEECCG
T ss_pred             EEECCCCCCCCChhhccHHHHHHHHHHHhHHHHHHHHHHHHHHhhCCeEEEEeeh
Confidence            999998521                         345567788889999999864

>3gvp_A Adenosylhomocysteinase 3; protein CO-factor complex, hydrolase, NAD, one-carbon metabolism, phosphoprotein; HET: NAD; 2.25A {Homo sapiens} PDB: 3mtg_A*

Probab=98.17  E-value=1.5e-05  Score=74.22  Aligned_cols=106  Identities=19%  Similarity=0.208  Sum_probs=80.1

Q ss_pred             hhhHhhhc-CCCCCCCEEEEEcCChHHHHHHHHHHHcCCeEEEEeCCchhHHHHHHHcCCCEEecCCCHHHHHHhcCCcc
Q 018067          171 VYSPLRFY-GLDKPGMHVGVVGLGGLGHVAVKFAKAMGVKVTVISTSPSKKSEAIERLGADSFLVSRDQDEMQAAMGTMD  249 (361)
Q Consensus       171 a~~~l~~~-~~~~~g~~vlV~Gag~vG~~a~~la~~~g~~vi~~~~~~~~~~~~~~~~g~~~vv~~~~~~~~~~~~~g~d  249 (361)
                      .+.++.+. ...-.|++|+|+|.|.+|..+++.++.+|++|+++++++.+.... ...|... .      .+.++..+.|
T Consensus       206 ~~~gi~rat~~~L~GktV~ViG~G~IGk~vA~~Lra~Ga~Viv~D~dp~ra~~A-~~~G~~v-~------~Leeal~~AD  277 (435)
T 3gvp_A          206 ILDGLKRTTDMMFGGKQVVVCGYGEVGKGCCAALKAMGSIVYVTEIDPICALQA-CMDGFRL-V------KLNEVIRQVD  277 (435)
T ss_dssp             HHHHHHHHHCCCCTTCEEEEECCSHHHHHHHHHHHHTTCEEEEECSCHHHHHHH-HHTTCEE-C------CHHHHTTTCS
T ss_pred             HHHHHHHhhCceecCCEEEEEeeCHHHHHHHHHHHHCCCEEEEEeCChhhhHHH-HHcCCEe-c------cHHHHHhcCC
Confidence            34555443 334589999999999999999999999999999988877654443 4556532 1      1345666899


Q ss_pred             EEEEcCCCcccHH-HHHhccccCCEEEEecCCCCCc
Q 018067          250 GIIDTVSAVHPLM-PLIGLLKSQGKLVLVGAPEKPL  284 (361)
Q Consensus       250 ~vid~~g~~~~~~-~~~~~l~~~G~~v~~g~~~~~~  284 (361)
                      +++.|.|....+. ..++.+++++.++.+|.....+
T Consensus       278 IVi~atgt~~lI~~e~l~~MK~gailINvgrg~~EI  313 (435)
T 3gvp_A          278 IVITCTGNKNVVTREHLDRMKNSCIVCNMGHSNTEI  313 (435)
T ss_dssp             EEEECSSCSCSBCHHHHHHSCTTEEEEECSSTTTTB
T ss_pred             EEEECCCCcccCCHHHHHhcCCCcEEEEecCCCccC
Confidence            9999988776565 8899999999999998765433

>2g1u_A Hypothetical protein TM1088A; structural genomics, joint center for structural genomics, J protein structure initiative, PSI-2; HET: AMP; 1.50A {Thermotoga maritima} PDB: 3l4b_A*

Probab=98.17  E-value=3.2e-06  Score=68.20  Aligned_cols=93  Identities=11%  Similarity=0.118  Sum_probs=65.2

Q ss_pred             cCCCCCCCEEEEEcCChHHHHHHHHHHHcCCeEEEEeCCchhHHHHHHHcCCCEEe-cCCCHHHHHHh-cCCccEEEEcC
Q 018067          178 YGLDKPGMHVGVVGLGGLGHVAVKFAKAMGVKVTVISTSPSKKSEAIERLGADSFL-VSRDQDEMQAA-MGTMDGIIDTV  255 (361)
Q Consensus       178 ~~~~~~g~~vlV~Gag~vG~~a~~la~~~g~~vi~~~~~~~~~~~~~~~~g~~~vv-~~~~~~~~~~~-~~g~d~vid~~  255 (361)
                      .....++.+|+|+|+|.+|+.+++.++..|.+|+++++++++...+.+..|...+. +..+.+.+.+. ..++|+||.++
T Consensus        13 ~~~~~~~~~v~IiG~G~iG~~la~~L~~~g~~V~vid~~~~~~~~~~~~~g~~~~~~d~~~~~~l~~~~~~~ad~Vi~~~   92 (155)
T 2g1u_A           13 MSKKQKSKYIVIFGCGRLGSLIANLASSSGHSVVVVDKNEYAFHRLNSEFSGFTVVGDAAEFETLKECGMEKADMVFAFT   92 (155)
T ss_dssp             ----CCCCEEEEECCSHHHHHHHHHHHHTTCEEEEEESCGGGGGGSCTTCCSEEEESCTTSHHHHHTTTGGGCSEEEECS
T ss_pred             hhcccCCCcEEEECCCHHHHHHHHHHHhCCCeEEEEECCHHHHHHHHhcCCCcEEEecCCCHHHHHHcCcccCCEEEEEe
Confidence            34446789999999999999999999999999999999887765552145654332 33344444443 34799999999


Q ss_pred             CCcccHHHHHhcccc
Q 018067          256 SAVHPLMPLIGLLKS  270 (361)
Q Consensus       256 g~~~~~~~~~~~l~~  270 (361)
                      +.......+...++.
T Consensus        93 ~~~~~~~~~~~~~~~  107 (155)
T 2g1u_A           93 NDDSTNFFISMNARY  107 (155)
T ss_dssp             SCHHHHHHHHHHHHH
T ss_pred             CCcHHHHHHHHHHHH
Confidence            987644555555554

>3c85_A Putative glutathione-regulated potassium-efflux S protein KEFB; TRKA domain; HET: AMP; 1.90A {Vibrio parahaemolyticus rimd 2210633}

Probab=98.09  E-value=2.4e-05  Score=64.77  Aligned_cols=94  Identities=15%  Similarity=0.169  Sum_probs=69.8

Q ss_pred             CCCEEEEEcCChHHHHHHHHHHHc-CCeEEEEeCCchhHHHHHHHcCCCEEe-cCCCHHHHHHh--cCCccEEEEcCCCc
Q 018067          183 PGMHVGVVGLGGLGHVAVKFAKAM-GVKVTVISTSPSKKSEAIERLGADSFL-VSRDQDEMQAA--MGTMDGIIDTVSAV  258 (361)
Q Consensus       183 ~g~~vlV~Gag~vG~~a~~la~~~-g~~vi~~~~~~~~~~~~~~~~g~~~vv-~~~~~~~~~~~--~~g~d~vid~~g~~  258 (361)
                      .+++|+|+|+|.+|..+++.++.. |.+|+++++++++...+ ++.|...+. |..+++.+.++  ..++|++|.+++..
T Consensus        38 ~~~~v~IiG~G~~G~~~a~~L~~~~g~~V~vid~~~~~~~~~-~~~g~~~~~gd~~~~~~l~~~~~~~~ad~vi~~~~~~  116 (183)
T 3c85_A           38 GHAQVLILGMGRIGTGAYDELRARYGKISLGIEIREEAAQQH-RSEGRNVISGDATDPDFWERILDTGHVKLVLLAMPHH  116 (183)
T ss_dssp             TTCSEEEECCSHHHHHHHHHHHHHHCSCEEEEESCHHHHHHH-HHTTCCEEECCTTCHHHHHTBCSCCCCCEEEECCSSH
T ss_pred             CCCcEEEECCCHHHHHHHHHHHhccCCeEEEEECCHHHHHHH-HHCCCCEEEcCCCCHHHHHhccCCCCCCEEEEeCCCh
Confidence            366899999999999999999998 99999999998877666 567876543 55566666666  45899999999986


Q ss_pred             ccHHHHHhccc---cCCEEEEe
Q 018067          259 HPLMPLIGLLK---SQGKLVLV  277 (361)
Q Consensus       259 ~~~~~~~~~l~---~~G~~v~~  277 (361)
                      .........++   +..+++..
T Consensus       117 ~~~~~~~~~~~~~~~~~~ii~~  138 (183)
T 3c85_A          117 QGNQTALEQLQRRNYKGQIAAI  138 (183)
T ss_dssp             HHHHHHHHHHHHTTCCSEEEEE
T ss_pred             HHHHHHHHHHHHHCCCCEEEEE
Confidence            53334444443   34566654

>2rir_A Dipicolinate synthase, A chain; structural genomics, APC1343, PSI-2, structure initiative; HET: MSE NAP; 2.79A {Bacillus subtilis}

Probab=98.08  E-value=4.6e-05  Score=68.45  Aligned_cols=111  Identities=16%  Similarity=0.191  Sum_probs=81.5

Q ss_pred             CCCCEEEEEcCChHHHHHHHHHHHcCCeEEEEeCCchhHHHHHHHcCCCEEecCCCHHHHHHhcCCccEEEEcCCCcccH
Q 018067          182 KPGMHVGVVGLGGLGHVAVKFAKAMGVKVTVISTSPSKKSEAIERLGADSFLVSRDQDEMQAAMGTMDGIIDTVSAVHPL  261 (361)
Q Consensus       182 ~~g~~vlV~Gag~vG~~a~~la~~~g~~vi~~~~~~~~~~~~~~~~g~~~vv~~~~~~~~~~~~~g~d~vid~~g~~~~~  261 (361)
                      -.|++|+|+|+|.+|..+++.++.+|++|++.+++.++...+ +++|+.. ++.   +.+.++..++|+|+.+++....-
T Consensus       155 l~g~~v~IiG~G~iG~~~a~~l~~~G~~V~~~d~~~~~~~~~-~~~g~~~-~~~---~~l~~~l~~aDvVi~~~p~~~i~  229 (300)
T 2rir_A          155 IHGSQVAVLGLGRTGMTIARTFAALGANVKVGARSSAHLARI-TEMGLVP-FHT---DELKEHVKDIDICINTIPSMILN  229 (300)
T ss_dssp             STTSEEEEECCSHHHHHHHHHHHHTTCEEEEEESSHHHHHHH-HHTTCEE-EEG---GGHHHHSTTCSEEEECCSSCCBC
T ss_pred             CCCCEEEEEcccHHHHHHHHHHHHCCCEEEEEECCHHHHHHH-HHCCCeE-Ech---hhHHHHhhCCCEEEECCChhhhC
Confidence            478999999999999999999999999999999988765554 4567642 222   23455567899999999875533


Q ss_pred             HHHHhccccCCEEEEecCCCCCcccChHHHHhCCcEEE
Q 018067          262 MPLIGLLKSQGKLVLVGAPEKPLELPAFSLLMGRKIVG  299 (361)
Q Consensus       262 ~~~~~~l~~~G~~v~~g~~~~~~~~~~~~~~~~~~~i~  299 (361)
                      ...++.+++++.++.++..+....+  .....++..+.
T Consensus       230 ~~~~~~mk~g~~lin~a~g~~~~~~--~~a~~~G~~~i  265 (300)
T 2rir_A          230 QTVLSSMTPKTLILDLASRPGGTDF--KYAEKQGIKAL  265 (300)
T ss_dssp             HHHHTTSCTTCEEEECSSTTCSBCH--HHHHHHTCEEE
T ss_pred             HHHHHhCCCCCEEEEEeCCCCCcCH--HHHHHCCCEEE
Confidence            5678889999999999875433333  33333455554

>1p91_A Ribosomal RNA large subunit methyltransferase A; RLMA, RRMA, 23S rRNA, NESG, structural genomics, PSI, protein structure initiative; HET: SAM; 2.80A {Escherichia coli} SCOP: c.66.1.33

Probab=98.06  E-value=2.1e-06  Score=75.80  Aligned_cols=95  Identities=21%  Similarity=0.222  Sum_probs=66.7

Q ss_pred             CCCCEEEEEcCChHHHHHHHHHHHc-CCeEEEEeCCchhHHHHHHHcCCCEEecCCCHHHHHHhcCCccEEEEcCCCccc
Q 018067          182 KPGMHVGVVGLGGLGHVAVKFAKAM-GVKVTVISTSPSKKSEAIERLGADSFLVSRDQDEMQAAMGTMDGIIDTVSAVHP  260 (361)
Q Consensus       182 ~~g~~vlV~Gag~vG~~a~~la~~~-g~~vi~~~~~~~~~~~~~~~~g~~~vv~~~~~~~~~~~~~g~d~vid~~g~~~~  260 (361)
                      .++.+||.+|+|. |..+..+++.. +.+++.++.+++....+.+......++.. +...+....+.+|+|+.. .....
T Consensus        84 ~~~~~vLdiG~G~-G~~~~~l~~~~~~~~v~~vD~s~~~~~~a~~~~~~~~~~~~-d~~~~~~~~~~fD~v~~~-~~~~~  160 (269)
T 1p91_A           84 DKATAVLDIGCGE-GYYTHAFADALPEITTFGLDVSKVAIKAAAKRYPQVTFCVA-SSHRLPFSDTSMDAIIRI-YAPCK  160 (269)
T ss_dssp             TTCCEEEEETCTT-STTHHHHHHTCTTSEEEEEESCHHHHHHHHHHCTTSEEEEC-CTTSCSBCTTCEEEEEEE-SCCCC
T ss_pred             CCCCEEEEECCCC-CHHHHHHHHhCCCCeEEEEeCCHHHHHHHHHhCCCcEEEEc-chhhCCCCCCceeEEEEe-CChhh
Confidence            5788999999988 99999999986 78999999988877666443322222222 211111112469999964 44555


Q ss_pred             HHHHHhccccCCEEEEecC
Q 018067          261 LMPLIGLLKSQGKLVLVGA  279 (361)
Q Consensus       261 ~~~~~~~l~~~G~~v~~g~  279 (361)
                      +..+.+.|+++|+++.+..
T Consensus       161 l~~~~~~L~pgG~l~~~~~  179 (269)
T 1p91_A          161 AEELARVVKPGGWVITATP  179 (269)
T ss_dssp             HHHHHHHEEEEEEEEEEEE
T ss_pred             HHHHHHhcCCCcEEEEEEc
Confidence            9999999999999988753

>3n58_A Adenosylhomocysteinase; ssgcid, hydrolase, structural genomics, seattle structural G center for infectious disease; HET: ADN NAD; 2.39A {Brucella melitensis biovar abortus}

Probab=97.98  E-value=5.7e-05  Score=70.42  Aligned_cols=104  Identities=17%  Similarity=0.208  Sum_probs=77.8

Q ss_pred             hhhHhhh-cCCCCCCCEEEEEcCChHHHHHHHHHHHcCCeEEEEeCCchhHHHHHHHcCCCEEecCCCHHHHHHhcCCcc
Q 018067          171 VYSPLRF-YGLDKPGMHVGVVGLGGLGHVAVKFAKAMGVKVTVISTSPSKKSEAIERLGADSFLVSRDQDEMQAAMGTMD  249 (361)
Q Consensus       171 a~~~l~~-~~~~~~g~~vlV~Gag~vG~~a~~la~~~g~~vi~~~~~~~~~~~~~~~~g~~~vv~~~~~~~~~~~~~g~d  249 (361)
                      .+.++.+ ....-.|++|+|+|.|.||..+++.++.+|++|+++++++.+.... ...|... ++      +.++....|
T Consensus       233 lvdgI~Ratg~~L~GKTVgVIG~G~IGr~vA~~lrafGa~Viv~d~dp~~a~~A-~~~G~~v-v~------LeElL~~AD  304 (464)
T 3n58_A          233 LVDGIRRGTDVMMAGKVAVVCGYGDVGKGSAQSLAGAGARVKVTEVDPICALQA-AMDGFEV-VT------LDDAASTAD  304 (464)
T ss_dssp             HHHHHHHHHCCCCTTCEEEEECCSHHHHHHHHHHHHTTCEEEEECSSHHHHHHH-HHTTCEE-CC------HHHHGGGCS
T ss_pred             HHHHHHHhcCCcccCCEEEEECcCHHHHHHHHHHHHCCCEEEEEeCCcchhhHH-HhcCcee-cc------HHHHHhhCC
Confidence            3444443 3334689999999999999999999999999999988776554333 3456542 21      234455799


Q ss_pred             EEEEcCCCcccH-HHHHhccccCCEEEEecCCCC
Q 018067          250 GIIDTVSAVHPL-MPLIGLLKSQGKLVLVGAPEK  282 (361)
Q Consensus       250 ~vid~~g~~~~~-~~~~~~l~~~G~~v~~g~~~~  282 (361)
                      +++.+.|+...+ ...+..+++++.++.+|....
T Consensus       305 IVv~atgt~~lI~~e~l~~MK~GAILINvGRgdv  338 (464)
T 3n58_A          305 IVVTTTGNKDVITIDHMRKMKDMCIVGNIGHFDN  338 (464)
T ss_dssp             EEEECCSSSSSBCHHHHHHSCTTEEEEECSSSTT
T ss_pred             EEEECCCCccccCHHHHhcCCCCeEEEEcCCCCc
Confidence            999999887644 588999999999999987543

>1o54_A SAM-dependent O-methyltransferase; TM0748, structural genomi PSI, protein structure initiative, joint center for structu genomics; 1.65A {Thermotoga maritima} SCOP: c.66.1.13

Probab=97.94  E-value=1.3e-05  Score=71.16  Aligned_cols=187  Identities=17%  Similarity=0.064  Sum_probs=101.4

Q ss_pred             eCCCCCCCCCCCEEEeccccCCCCCCcccccCCCCCCcchhcccccccCCCCcCCCcceeEEeecCC--ceEECCCCCCc
Q 018067           81 VGSKVSKFKVGDKVGVGCMVGSCRSCDSCAIDLENYCPKVIMTYANKYHDGTITYGGYSDIMVADEH--FVVRIPEGTPL  158 (361)
Q Consensus        81 vG~~v~~~~~GdrV~~~~~~~~c~~c~~c~~~~~~~c~~~~~~~~~~~~~~~~~~g~~a~~v~v~~~--~~~~ip~~~~~  158 (361)
                      +|+-...++.||+|.+.... .+..+..+..+....+....+.+.-      .....+.+.+.++..  .+..-|+...+
T Consensus        13 ~~~~~~~~~~gd~v~i~~~~-~~~~~~~~~~~~~~~~~~g~~~~~~------i~g~~~g~~~~~~~~~~~~~~~p~~~~~   85 (277)
T 1o54_A           13 VGKVADTLKPGDRVLLSFED-ESEFLVDLEKDKKLHTHLGIIDLNE------VFEKGPGEIIRTSAGKKGYILIPSLIDE   85 (277)
T ss_dssp             CCCGGGCCCTTCEEEEEETT-SCEEEEECCTTCEEEETTEEEEHHH------HTTSCTTCEEECTTCCEEEEECCCHHHH
T ss_pred             cccccCCCCCCCEEEEEECC-CcEEEEEEcCCCEEecCCceEEHHH------hcCCCCCcEEEEcCCcEEEEeCCCHHHH
Confidence            56666679999999874321 2222333333333333222111110      011223344555443  33444543322


Q ss_pred             ccccccc---hhhhhhhhHhhhcCCCCCCCEEEEEcCChHHHHHHHHHHHc--CCeEEEEeCCchhHHHHHH---HcCC-
Q 018067          159 DATAPLL---CAGITVYSPLRFYGLDKPGMHVGVVGLGGLGHVAVKFAKAM--GVKVTVISTSPSKKSEAIE---RLGA-  229 (361)
Q Consensus       159 ~~aa~l~---~~~~ta~~~l~~~~~~~~g~~vlV~Gag~vG~~a~~la~~~--g~~vi~~~~~~~~~~~~~~---~~g~-  229 (361)
                      .++..-.   .....+-..+. ...++++++||-+|+|. |..++.+++..  +.+++.++.+++....+.+   ..+. 
T Consensus        86 ~~~~~~~~~~~~~~~~~~i~~-~~~~~~~~~VLDiG~G~-G~~~~~la~~~~~~~~v~~vD~s~~~~~~a~~~~~~~~~~  163 (277)
T 1o54_A           86 IMNMKRRTQIVYPKDSSFIAM-MLDVKEGDRIIDTGVGS-GAMCAVLARAVGSSGKVFAYEKREEFAKLAESNLTKWGLI  163 (277)
T ss_dssp             HHTCCC-CCCCCHHHHHHHHH-HTTCCTTCEEEEECCTT-SHHHHHHHHHTTTTCEEEEECCCHHHHHHHHHHHHHTTCG
T ss_pred             HhhccccCCccCHHHHHHHHH-HhCCCCCCEEEEECCcC-CHHHHHHHHHhCCCcEEEEEECCHHHHHHHHHHHHHcCCC
Confidence            2211000   00011112233 34578999999999987 88888999985  4699999888776544433   2343 


Q ss_pred             -CEEecCCCHHHHHHhc-CCccEEEEcCCCc-ccHHHHHhccccCCEEEEec
Q 018067          230 -DSFLVSRDQDEMQAAM-GTMDGIIDTVSAV-HPLMPLIGLLKSQGKLVLVG  278 (361)
Q Consensus       230 -~~vv~~~~~~~~~~~~-~g~d~vid~~g~~-~~~~~~~~~l~~~G~~v~~g  278 (361)
                       ...+...+..  ..+. +.+|+|+-..... ..+..+.+.|+++|.++...
T Consensus       164 ~~v~~~~~d~~--~~~~~~~~D~V~~~~~~~~~~l~~~~~~L~pgG~l~~~~  213 (277)
T 1o54_A          164 ERVTIKVRDIS--EGFDEKDVDALFLDVPDPWNYIDKCWEALKGGGRFATVC  213 (277)
T ss_dssp             GGEEEECCCGG--GCCSCCSEEEEEECCSCGGGTHHHHHHHEEEEEEEEEEE
T ss_pred             CCEEEEECCHH--HcccCCccCEEEECCcCHHHHHHHHHHHcCCCCEEEEEe
Confidence             1112122211  1122 3699998776655 56788999999999998874

>3h9u_A Adenosylhomocysteinase; NAD CO-factor complex, structural genomics, SGC stockholm, S genomics consortium, SGC, hydrolase, NAD; HET: NAD ADN PG4; 1.90A {Trypanosoma brucei} PDB: 3g1u_A* 1b3r_A* 1k0u_A* 1ky4_A* 2h5l_A* 1xwf_A* 1d4f_A* 1ky5_A* 3nj4_A* 1li4_A* 1a7a_A*

Probab=97.91  E-value=6.6e-05  Score=70.01  Aligned_cols=108  Identities=15%  Similarity=0.157  Sum_probs=79.4

Q ss_pred             CCCCEEEEEcCChHHHHHHHHHHHcCCeEEEEeCCchhHHHHHHHcCCCEEecCCCHHHHHHhcCCccEEEEcCCCcccH
Q 018067          182 KPGMHVGVVGLGGLGHVAVKFAKAMGVKVTVISTSPSKKSEAIERLGADSFLVSRDQDEMQAAMGTMDGIIDTVSAVHPL  261 (361)
Q Consensus       182 ~~g~~vlV~Gag~vG~~a~~la~~~g~~vi~~~~~~~~~~~~~~~~g~~~vv~~~~~~~~~~~~~g~d~vid~~g~~~~~  261 (361)
                      -.|++|+|+|.|.+|..+++.++.+|++|+++++++.+...+ ...|....       .+.++....|+++.+.+....+
T Consensus       209 L~GktVgIiG~G~IG~~vA~~Lka~Ga~Viv~D~~p~~a~~A-~~~G~~~~-------sL~eal~~ADVVilt~gt~~iI  280 (436)
T 3h9u_A          209 IAGKTACVCGYGDVGKGCAAALRGFGARVVVTEVDPINALQA-AMEGYQVL-------LVEDVVEEAHIFVTTTGNDDII  280 (436)
T ss_dssp             CTTCEEEEECCSHHHHHHHHHHHHTTCEEEEECSCHHHHHHH-HHTTCEEC-------CHHHHTTTCSEEEECSSCSCSB
T ss_pred             ccCCEEEEEeeCHHHHHHHHHHHHCCCEEEEECCChhhhHHH-HHhCCeec-------CHHHHHhhCCEEEECCCCcCcc
Confidence            479999999999999999999999999999988877554443 45565421       2455666899999988876544


Q ss_pred             H-HHHhccccCCEEEEecCCCCCcccChHHHHhCCcEEE
Q 018067          262 M-PLIGLLKSQGKLVLVGAPEKPLELPAFSLLMGRKIVG  299 (361)
Q Consensus       262 ~-~~~~~l~~~G~~v~~g~~~~~~~~~~~~~~~~~~~i~  299 (361)
                      . ..++.++++..++.+|..  ...++...+..+..+..
T Consensus       281 ~~e~l~~MK~gAIVINvgRg--~vEID~~~L~~~~~~~~  317 (436)
T 3h9u_A          281 TSEHFPRMRDDAIVCNIGHF--DTEIQVAWLKANAKERV  317 (436)
T ss_dssp             CTTTGGGCCTTEEEEECSSS--GGGBCHHHHHHHCSEEE
T ss_pred             CHHHHhhcCCCcEEEEeCCC--CCccCHHHHHhhcCceE
Confidence            4 678889999999999843  34455555444444333

>3ond_A Adenosylhomocysteinase; plant protein, enzyme-substrate complex, NAD cofactor, regul SAM-dependent methylation reactions; HET: NAD ADN; 1.17A {Lupinus luteus} PDB: 3one_A* 3onf_A*

Probab=97.90  E-value=3.5e-05  Score=72.92  Aligned_cols=91  Identities=20%  Similarity=0.249  Sum_probs=71.6

Q ss_pred             CCCCEEEEEcCChHHHHHHHHHHHcCCeEEEEeCCchhHHHHHHHcCCCEEecCCCHHHHHHhcCCccEEEEcCCCcccH
Q 018067          182 KPGMHVGVVGLGGLGHVAVKFAKAMGVKVTVISTSPSKKSEAIERLGADSFLVSRDQDEMQAAMGTMDGIIDTVSAVHPL  261 (361)
Q Consensus       182 ~~g~~vlV~Gag~vG~~a~~la~~~g~~vi~~~~~~~~~~~~~~~~g~~~vv~~~~~~~~~~~~~g~d~vid~~g~~~~~  261 (361)
                      -.|++++|+|+|.+|..+++.++..|++|+++++++.+...+ ...|++ +.   +   ..+....+|+++++.|....+
T Consensus       263 L~GKtVvVtGaGgIG~aiA~~Laa~GA~Viv~D~~~~~a~~A-a~~g~d-v~---~---lee~~~~aDvVi~atG~~~vl  334 (488)
T 3ond_A          263 IAGKVAVVAGYGDVGKGCAAALKQAGARVIVTEIDPICALQA-TMEGLQ-VL---T---LEDVVSEADIFVTTTGNKDII  334 (488)
T ss_dssp             CTTCEEEEECCSHHHHHHHHHHHHTTCEEEEECSCHHHHHHH-HHTTCE-EC---C---GGGTTTTCSEEEECSSCSCSB
T ss_pred             ccCCEEEEECCCHHHHHHHHHHHHCCCEEEEEcCCHHHHHHH-HHhCCc-cC---C---HHHHHHhcCEEEeCCCChhhh
Confidence            479999999999999999999999999999998887665555 345643 11   1   123345799999999986655


Q ss_pred             H-HHHhccccCCEEEEecCC
Q 018067          262 M-PLIGLLKSQGKLVLVGAP  280 (361)
Q Consensus       262 ~-~~~~~l~~~G~~v~~g~~  280 (361)
                      . ..++.+++++.++.+|..
T Consensus       335 ~~e~l~~mk~gaiVvNaG~~  354 (488)
T 3ond_A          335 MLDHMKKMKNNAIVCNIGHF  354 (488)
T ss_dssp             CHHHHTTSCTTEEEEESSST
T ss_pred             hHHHHHhcCCCeEEEEcCCC
Confidence            4 488999999999999865

>4eso_A Putative oxidoreductase; NADP, structural genomics, PSI-biology, NEW structural genomics research consortium, nysgrc; HET: MSE NAP; 1.91A {Sinorhizobium meliloti} PDB: 3vc7_A

Probab=97.87  E-value=9.4e-05  Score=64.70  Aligned_cols=100  Identities=19%  Similarity=0.252  Sum_probs=73.9

Q ss_pred             CCCCEEEEEcC-ChHHHHHHHHHHHcCCeEEEEeCCchhHHHHHHHcCCCE---EecCCCHHHHHHh-------cCCccE
Q 018067          182 KPGMHVGVVGL-GGLGHVAVKFAKAMGVKVTVISTSPSKKSEAIERLGADS---FLVSRDQDEMQAA-------MGTMDG  250 (361)
Q Consensus       182 ~~g~~vlV~Ga-g~vG~~a~~la~~~g~~vi~~~~~~~~~~~~~~~~g~~~---vv~~~~~~~~~~~-------~~g~d~  250 (361)
                      -.|+++||.|+ |++|.++++.+...|++|+++++++++..++.++++...   ..|-.+.+.+..+       .+++|+
T Consensus         6 l~gk~~lVTGas~gIG~a~a~~l~~~G~~V~~~~r~~~~~~~~~~~~~~~~~~~~~Dv~~~~~v~~~~~~~~~~~g~id~   85 (255)
T 4eso_A            6 YQGKKAIVIGGTHGMGLATVRRLVEGGAEVLLTGRNESNIARIREEFGPRVHALRSDIADLNEIAVLGAAAGQTLGAIDL   85 (255)
T ss_dssp             TTTCEEEEETCSSHHHHHHHHHHHHTTCEEEEEESCHHHHHHHHHHHGGGEEEEECCTTCHHHHHHHHHHHHHHHSSEEE
T ss_pred             CCCCEEEEECCCCHHHHHHHHHHHHCCCEEEEEeCCHHHHHHHHHHhCCcceEEEccCCCHHHHHHHHHHHHHHhCCCCE
Confidence            35789999997 999999999999999999999999988888877776432   2345555443332       257999


Q ss_pred             EEEcCCCcc-------------------------cHHHHHhccccCCEEEEecCCC
Q 018067          251 IIDTVSAVH-------------------------PLMPLIGLLKSQGKLVLVGAPE  281 (361)
Q Consensus       251 vid~~g~~~-------------------------~~~~~~~~l~~~G~~v~~g~~~  281 (361)
                      +++++|...                         ..+.++..++++|+++.+++..
T Consensus        86 lv~nAg~~~~~~~~~~~~~~~~~~~~~N~~g~~~~~~~~~~~~~~~g~iv~isS~~  141 (255)
T 4eso_A           86 LHINAGVSELEPFDQVSEASYDRQFAVNTKGAFFTVQRLTPLIREGGSIVFTSSVA  141 (255)
T ss_dssp             EEECCCCCCCBCGGGCCHHHHHHHHHHHTHHHHHHHHHHGGGEEEEEEEEEECCGG
T ss_pred             EEECCCCCCCCChhhCCHHHHHHHHHHhhHHHHHHHHHHHHHHhcCCEEEEECChh
Confidence            999998531                         1233455667789999998643

>3fpf_A Mtnas, putative uncharacterized protein; thermonicotianamine, nicotianamine, biosynthetic protein; HET: TNA MTA; 1.66A {Methanothermobacter thermautotrophicusorganism_taxid} PDB: 3fpe_A* 3fph_A* 3fpg_A* 3fpj_A* 3o31_A*

Probab=97.83  E-value=3.6e-05  Score=68.46  Aligned_cols=100  Identities=15%  Similarity=0.233  Sum_probs=72.1

Q ss_pred             cCCCCCCCEEEEEcCChHHHHHHHHHHHcCCeEEEEeCCchhHHHHHH---HcCCCE-EecCCCHHHHHHhcCCccEEEE
Q 018067          178 YGLDKPGMHVGVVGLGGLGHVAVKFAKAMGVKVTVISTSPSKKSEAIE---RLGADS-FLVSRDQDEMQAAMGTMDGIID  253 (361)
Q Consensus       178 ~~~~~~g~~vlV~Gag~vG~~a~~la~~~g~~vi~~~~~~~~~~~~~~---~~g~~~-vv~~~~~~~~~~~~~g~d~vid  253 (361)
                      .+++++|++||.+|+|..++.++.+++..|++|+.++.+++..+.+.+   +.|.+. -+...+...+  ..+.||+|+.
T Consensus       117 la~l~~g~rVLDIGcG~G~~ta~~lA~~~ga~V~gIDis~~~l~~Ar~~~~~~gl~~v~~v~gDa~~l--~d~~FDvV~~  194 (298)
T 3fpf_A          117 LGRFRRGERAVFIGGGPLPLTGILLSHVYGMRVNVVEIEPDIAELSRKVIEGLGVDGVNVITGDETVI--DGLEFDVLMV  194 (298)
T ss_dssp             HTTCCTTCEEEEECCCSSCHHHHHHHHTTCCEEEEEESSHHHHHHHHHHHHHHTCCSEEEEESCGGGG--GGCCCSEEEE
T ss_pred             HcCCCCcCEEEEECCCccHHHHHHHHHccCCEEEEEECCHHHHHHHHHHHHhcCCCCeEEEECchhhC--CCCCcCEEEE
Confidence            466899999999999988888888888889999999999876654432   335421 1212221111  1358999997


Q ss_pred             cCCCc---ccHHHHHhccccCCEEEEecC
Q 018067          254 TVSAV---HPLMPLIGLLKSQGKLVLVGA  279 (361)
Q Consensus       254 ~~g~~---~~~~~~~~~l~~~G~~v~~g~  279 (361)
                      ....+   ..+..+.+.|+|||+++....
T Consensus       195 ~a~~~d~~~~l~el~r~LkPGG~Lvv~~~  223 (298)
T 3fpf_A          195 AALAEPKRRVFRNIHRYVDTETRIIYRTY  223 (298)
T ss_dssp             CTTCSCHHHHHHHHHHHCCTTCEEEEEEC
T ss_pred             CCCccCHHHHHHHHHHHcCCCcEEEEEcC
Confidence            66543   357889999999999998764

>4e6p_A Probable sorbitol dehydrogenase (L-iditol 2-dehyd; NAD(P)-binding, structural genomics, PSI-biology; HET: MSE; 2.10A {Sinorhizobium meliloti} PDB: 1k2w_A

Probab=97.74  E-value=0.00028  Score=61.75  Aligned_cols=75  Identities=19%  Similarity=0.309  Sum_probs=59.0

Q ss_pred             CCCEEEEEcC-ChHHHHHHHHHHHcCCeEEEEeCCchhHHHHHHHcCCCE---EecCCCHHHHHHh-------cCCccEE
Q 018067          183 PGMHVGVVGL-GGLGHVAVKFAKAMGVKVTVISTSPSKKSEAIERLGADS---FLVSRDQDEMQAA-------MGTMDGI  251 (361)
Q Consensus       183 ~g~~vlV~Ga-g~vG~~a~~la~~~g~~vi~~~~~~~~~~~~~~~~g~~~---vv~~~~~~~~~~~-------~~g~d~v  251 (361)
                      .++++||.|+ |++|..+++.+...|++|++++++.++..++.++++...   ..|..+++.+.++       .+++|++
T Consensus         7 ~~k~vlVTGas~gIG~~ia~~l~~~G~~V~~~~r~~~~~~~~~~~~~~~~~~~~~D~~~~~~v~~~~~~~~~~~g~id~l   86 (259)
T 4e6p_A            7 EGKSALITGSARGIGRAFAEAYVREGATVAIADIDIERARQAAAEIGPAAYAVQMDVTRQDSIDAAIAATVEHAGGLDIL   86 (259)
T ss_dssp             TTCEEEEETCSSHHHHHHHHHHHHTTCEEEEEESCHHHHHHHHHHHCTTEEEEECCTTCHHHHHHHHHHHHHHSSSCCEE
T ss_pred             CCCEEEEECCCcHHHHHHHHHHHHCCCEEEEEeCCHHHHHHHHHHhCCCceEEEeeCCCHHHHHHHHHHHHHHcCCCCEE
Confidence            5789999997 999999999999999999999999888888877776532   2355565544433       2479999


Q ss_pred             EEcCCC
Q 018067          252 IDTVSA  257 (361)
Q Consensus       252 id~~g~  257 (361)
                      |+++|.
T Consensus        87 v~~Ag~   92 (259)
T 4e6p_A           87 VNNAAL   92 (259)
T ss_dssp             EECCCC
T ss_pred             EECCCc
Confidence            999985

>4dyv_A Short-chain dehydrogenase/reductase SDR; structural genomics, PSI-biology, NEW YORK structural genomi research consortium, nysgrc; 1.80A {Xanthobacter autotrophicus}

Probab=97.73  E-value=0.00023  Score=62.90  Aligned_cols=76  Identities=18%  Similarity=0.247  Sum_probs=58.1

Q ss_pred             CCCCEEEEEcC-ChHHHHHHHHHHHcCCeEEEEeCCchhHHHHHHHcCCCE---EecCCCHHHHHHh-------cCCccE
Q 018067          182 KPGMHVGVVGL-GGLGHVAVKFAKAMGVKVTVISTSPSKKSEAIERLGADS---FLVSRDQDEMQAA-------MGTMDG  250 (361)
Q Consensus       182 ~~g~~vlV~Ga-g~vG~~a~~la~~~g~~vi~~~~~~~~~~~~~~~~g~~~---vv~~~~~~~~~~~-------~~g~d~  250 (361)
                      ..++++||.|+ |++|.+++..+...|++|++++++.++..++.++++...   ..|..+++.+.++       .+++|+
T Consensus        26 ~~~k~~lVTGas~GIG~aia~~la~~G~~V~~~~r~~~~~~~~~~~~~~~~~~~~~Dv~d~~~v~~~~~~~~~~~g~iD~  105 (272)
T 4dyv_A           26 TGKKIAIVTGAGSGVGRAVAVALAGAGYGVALAGRRLDALQETAAEIGDDALCVPTDVTDPDSVRALFTATVEKFGRVDV  105 (272)
T ss_dssp             --CCEEEETTTTSHHHHHHHHHHHHTTCEEEEEESCHHHHHHHHHHHTSCCEEEECCTTSHHHHHHHHHHHHHHHSCCCE
T ss_pred             CCCCEEEEeCCCcHHHHHHHHHHHHCCCEEEEEECCHHHHHHHHHHhCCCeEEEEecCCCHHHHHHHHHHHHHHcCCCCE
Confidence            35788999987 999999999999999999999999988888877776431   2355565544433       248999


Q ss_pred             EEEcCCC
Q 018067          251 IIDTVSA  257 (361)
Q Consensus       251 vid~~g~  257 (361)
                      +|+++|.
T Consensus       106 lVnnAg~  112 (272)
T 4dyv_A          106 LFNNAGT  112 (272)
T ss_dssp             EEECCCC
T ss_pred             EEECCCC
Confidence            9999985

>4fs3_A Enoyl-[acyl-carrier-protein] reductase [NADPH] FA; rossmann fold, short chain dehydrogenase, NADPH binding, oxidoreductase; HET: 0WD 0WE; 1.80A {Staphylococcus aureus subsp} PDB: 3gr6_A* 3gns_A* 4all_A* 3gnt_A 4alk_A* 4alj_A* 4ali_A* 4alm_A 4aln_A

Probab=97.72  E-value=0.00035  Score=61.09  Aligned_cols=99  Identities=13%  Similarity=0.230  Sum_probs=69.0

Q ss_pred             CCCEEEEEcC-C--hHHHHHHHHHHHcCCeEEEEeCCchhHHHHHHH---cCC-C-E--EecCCCHHHHHHh-------c
Q 018067          183 PGMHVGVVGL-G--GLGHVAVKFAKAMGVKVTVISTSPSKKSEAIER---LGA-D-S--FLVSRDQDEMQAA-------M  245 (361)
Q Consensus       183 ~g~~vlV~Ga-g--~vG~~a~~la~~~g~~vi~~~~~~~~~~~~~~~---~g~-~-~--vv~~~~~~~~~~~-------~  245 (361)
                      .|+++||.|+ |  +||.++++.+...|++|++++++++..+++.+.   ++. . .  ..|-.+++.+.++       .
T Consensus         5 ~gK~alVTGaa~~~GIG~aiA~~la~~Ga~Vvi~~r~~~~~~~~~~~~~~~~~~~~~~~~~Dv~~~~~v~~~~~~~~~~~   84 (256)
T 4fs3_A            5 ENKTYVIMGIANKRSIAFGVAKVLDQLGAKLVFTYRKERSRKELEKLLEQLNQPEAHLYQIDVQSDEEVINGFEQIGKDV   84 (256)
T ss_dssp             TTCEEEEECCCSTTCHHHHHHHHHHHTTCEEEEEESSGGGHHHHHHHHGGGTCSSCEEEECCTTCHHHHHHHHHHHHHHH
T ss_pred             CCCEEEEECCCCCchHHHHHHHHHHHCCCEEEEEECCHHHHHHHHHHHHhcCCCcEEEEEccCCCHHHHHHHHHHHHHHh
Confidence            6899999996 5  799999999999999999999998766655443   332 2 1  2355555443332       3


Q ss_pred             CCccEEEEcCCCcc-----------------------------cHHHHHhccccCCEEEEecCCC
Q 018067          246 GTMDGIIDTVSAVH-----------------------------PLMPLIGLLKSQGKLVLVGAPE  281 (361)
Q Consensus       246 ~g~d~vid~~g~~~-----------------------------~~~~~~~~l~~~G~~v~~g~~~  281 (361)
                      +++|++++++|...                             ........++++|++|.+++..
T Consensus        85 G~iD~lvnnAg~~~~~~~~~~~~~~~~~~~~~~~~vn~~~~~~~~~~~~~~~~~~G~IVnisS~~  149 (256)
T 4fs3_A           85 GNIDGVYHSIAFANMEDLRGRFSETSREGFLLAQDISSYSLTIVAHEAKKLMPEGGSIVATTYLG  149 (256)
T ss_dssp             CCCSEEEECCCCCCGGGGTSCGGGCCHHHHHHHHHHHTHHHHHHHHHHHTTCTTCEEEEEEECGG
T ss_pred             CCCCEEEeccccccccccccccccCCHHHHHHHHHHHHHHHHHHHHHHHHHhccCCEEEEEeccc
Confidence            58999999988421                             0112344567889999998643

>3ged_A Short-chain dehydrogenase/reductase SDR; SCOR, rossmann fold, oxidoreductase; 1.70A {Clostridium thermocellum atcc 27405} PDB: 3geg_A*

Probab=97.72  E-value=0.00029  Score=61.21  Aligned_cols=97  Identities=14%  Similarity=0.091  Sum_probs=68.8

Q ss_pred             CCEEEEEcC-ChHHHHHHHHHHHcCCeEEEEeCCchhHHHHHHHcCCC--EEecCCCHHHHHHh-------cCCccEEEE
Q 018067          184 GMHVGVVGL-GGLGHVAVKFAKAMGVKVTVISTSPSKKSEAIERLGAD--SFLVSRDQDEMQAA-------MGTMDGIID  253 (361)
Q Consensus       184 g~~vlV~Ga-g~vG~~a~~la~~~g~~vi~~~~~~~~~~~~~~~~g~~--~vv~~~~~~~~~~~-------~~g~d~vid  253 (361)
                      +++|||.|+ +++|.++++.+...|++|+++++++++..++.++.+-.  ...|-.+++.++++       .++.|+.++
T Consensus         2 nK~vlVTGas~GIG~aia~~la~~Ga~V~~~~~~~~~~~~~~~~~~~~~~~~~Dv~~~~~v~~~v~~~~~~~g~iDiLVN   81 (247)
T 3ged_A            2 NRGVIVTGGGHGIGKQICLDFLEAGDKVCFIDIDEKRSADFAKERPNLFYFHGDVADPLTLKKFVEYAMEKLQRIDVLVN   81 (247)
T ss_dssp             CCEEEEESTTSHHHHHHHHHHHHTTCEEEEEESCHHHHHHHHTTCTTEEEEECCTTSHHHHHHHHHHHHHHHSCCCEEEE
T ss_pred             CCEEEEecCCCHHHHHHHHHHHHCCCEEEEEeCCHHHHHHHHHhcCCEEEEEecCCCHHHHHHHHHHHHHHcCCCCEEEE
Confidence            368999987 99999999999999999999999988877776554321  12345555444332       258999999


Q ss_pred             cCCCcc-------------------------cHHHHHhcc-ccCCEEEEecCC
Q 018067          254 TVSAVH-------------------------PLMPLIGLL-KSQGKLVLVGAP  280 (361)
Q Consensus       254 ~~g~~~-------------------------~~~~~~~~l-~~~G~~v~~g~~  280 (361)
                      ++|...                         ..+.++..+ +.+|++|.+++.
T Consensus        82 NAG~~~~~~~~~~~~e~~~~~~~vNl~g~~~~~~~~~~~m~~~~G~IInisS~  134 (247)
T 3ged_A           82 NACRGSKGILSSLLYEEFDYILSVGLKAPYELSRLCRDELIKNKGRIINIAST  134 (247)
T ss_dssp             CCCCCCCCGGGTCCHHHHHHHHHHHTHHHHHHHHHHHHHHHHTTCEEEEECCG
T ss_pred             CCCCCCCCCcccCCHHHHHHHHHHHhHHHHHHHHHHHHHHhhcCCcEEEEeec
Confidence            998521                         122333344 567999999864

>4fn4_A Short chain dehydrogenase; NADH-binding, rossmann fold, oxidoreductase; HET: NAD; 1.75A {Sulfolobus acidocaldarius}

Probab=97.71  E-value=0.00026  Score=61.76  Aligned_cols=99  Identities=13%  Similarity=0.201  Sum_probs=70.9

Q ss_pred             CCCEEEEEcC-ChHHHHHHHHHHHcCCeEEEEeCCchhHHHHHHHc---CCCE---EecCCCHHHHHHh-------cCCc
Q 018067          183 PGMHVGVVGL-GGLGHVAVKFAKAMGVKVTVISTSPSKKSEAIERL---GADS---FLVSRDQDEMQAA-------MGTM  248 (361)
Q Consensus       183 ~g~~vlV~Ga-g~vG~~a~~la~~~g~~vi~~~~~~~~~~~~~~~~---g~~~---vv~~~~~~~~~~~-------~~g~  248 (361)
                      +|+++||.|+ +++|.++++.+-..|++|+++++++++.+++.+++   |.+.   ..|-.+++.++++       .++.
T Consensus         6 ~gKvalVTGas~GIG~aiA~~la~~Ga~Vv~~~~~~~~~~~~~~~i~~~g~~~~~~~~Dvt~~~~v~~~~~~~~~~~G~i   85 (254)
T 4fn4_A            6 KNKVVIVTGAGSGIGRAIAKKFALNDSIVVAVELLEDRLNQIVQELRGMGKEVLGVKADVSKKKDVEEFVRRTFETYSRI   85 (254)
T ss_dssp             TTCEEEEETTTSHHHHHHHHHHHHTTCEEEEEESCHHHHHHHHHHHHHTTCCEEEEECCTTSHHHHHHHHHHHHHHHSCC
T ss_pred             CCCEEEEeCCCCHHHHHHHHHHHHcCCEEEEEECCHHHHHHHHHHHHhcCCcEEEEEccCCCHHHHHHHHHHHHHHcCCC
Confidence            5889999997 99999999999999999999999988776665544   5432   2355555544433       2579


Q ss_pred             cEEEEcCCCcc--------------------------cHHHHHhcc--ccCCEEEEecCCC
Q 018067          249 DGIIDTVSAVH--------------------------PLMPLIGLL--KSQGKLVLVGAPE  281 (361)
Q Consensus       249 d~vid~~g~~~--------------------------~~~~~~~~l--~~~G~~v~~g~~~  281 (361)
                      |++++++|...                          ..+.++..|  +.+|++|.+++..
T Consensus        86 DiLVNNAGi~~~~~~~~~~~~e~~~~~~~vNl~g~~~~~~~~~p~m~~~~~G~IVnisS~~  146 (254)
T 4fn4_A           86 DVLCNNAGIMDGVTPVAEVSDELWERVLAVNLYSAFYSSRAVIPIMLKQGKGVIVNTASIA  146 (254)
T ss_dssp             CEEEECCCCCCTTCCGGGCCHHHHHHHHHHHTHHHHHHHHHHHHHHHHHTCEEEEEECCGG
T ss_pred             CEEEECCcccCCCCChhhCCHHHHHHHHHHHhHHHHHHHHHHHHHHHHcCCcEEEEEechh
Confidence            99999998310                          223345555  3479999998643

>3grp_A 3-oxoacyl-(acyl carrierprotein) reductase; structural genomics, oxidoreductase, S structural genomics center for infectious disease, ssgcid; 2.09A {Bartonella henselae} PDB: 3enn_A 3emk_A

Probab=97.71  E-value=0.00035  Score=61.49  Aligned_cols=76  Identities=25%  Similarity=0.362  Sum_probs=59.7

Q ss_pred             CCCCEEEEEcC-ChHHHHHHHHHHHcCCeEEEEeCCchhHHHHHHHcCCCEE---ecCCCHHHHHHh-------cCCccE
Q 018067          182 KPGMHVGVVGL-GGLGHVAVKFAKAMGVKVTVISTSPSKKSEAIERLGADSF---LVSRDQDEMQAA-------MGTMDG  250 (361)
Q Consensus       182 ~~g~~vlV~Ga-g~vG~~a~~la~~~g~~vi~~~~~~~~~~~~~~~~g~~~v---v~~~~~~~~~~~-------~~g~d~  250 (361)
                      -.|+++||.|+ |++|.++++.+...|++|++++++.++..++.++++....   .|..+++.+.++       .+++|+
T Consensus        25 l~gk~vlVTGas~gIG~aia~~la~~G~~V~~~~r~~~~~~~~~~~~~~~~~~~~~Dv~d~~~v~~~~~~~~~~~g~iD~  104 (266)
T 3grp_A           25 LTGRKALVTGATGGIGEAIARCFHAQGAIVGLHGTREDKLKEIAADLGKDVFVFSANLSDRKSIKQLAEVAEREMEGIDI  104 (266)
T ss_dssp             CTTCEEEESSTTSHHHHHHHHHHHHTTCEEEEEESCHHHHHHHHHHHCSSEEEEECCTTSHHHHHHHHHHHHHHHTSCCE
T ss_pred             cCCCEEEEeCCCcHHHHHHHHHHHHCCCEEEEEeCCHHHHHHHHHHhCCceEEEEeecCCHHHHHHHHHHHHHHcCCCCE
Confidence            35789999987 9999999999999999999999999888888777775432   245555444333       247999


Q ss_pred             EEEcCCC
Q 018067          251 IIDTVSA  257 (361)
Q Consensus       251 vid~~g~  257 (361)
                      +|+++|.
T Consensus       105 lvnnAg~  111 (266)
T 3grp_A          105 LVNNAGI  111 (266)
T ss_dssp             EEECCCC
T ss_pred             EEECCCC
Confidence            9999985

>4dqx_A Probable oxidoreductase protein; structural genomics, PSI-biology, NEW YORK structural genomi research consortium, nysgrc; 2.00A {Rhizobium etli}

Probab=97.70  E-value=0.00034  Score=61.96  Aligned_cols=76  Identities=13%  Similarity=0.208  Sum_probs=59.2

Q ss_pred             CCCCEEEEEcC-ChHHHHHHHHHHHcCCeEEEEeCCchhHHHHHHHcCCCE---EecCCCHHHHHHh-------cCCccE
Q 018067          182 KPGMHVGVVGL-GGLGHVAVKFAKAMGVKVTVISTSPSKKSEAIERLGADS---FLVSRDQDEMQAA-------MGTMDG  250 (361)
Q Consensus       182 ~~g~~vlV~Ga-g~vG~~a~~la~~~g~~vi~~~~~~~~~~~~~~~~g~~~---vv~~~~~~~~~~~-------~~g~d~  250 (361)
                      -.++++||.|+ |++|.++++.+...|++|++++++.++..++.++++...   ..|-.+++.+.++       .+++|+
T Consensus        25 l~~k~vlVTGas~GIG~aia~~l~~~G~~V~~~~r~~~~~~~~~~~~~~~~~~~~~Dv~d~~~v~~~~~~~~~~~g~iD~  104 (277)
T 4dqx_A           25 LNQRVCIVTGGGSGIGRATAELFAKNGAYVVVADVNEDAAVRVANEIGSKAFGVRVDVSSAKDAESMVEKTTAKWGRVDV  104 (277)
T ss_dssp             TTTCEEEEETTTSHHHHHHHHHHHHTTCEEEEEESSHHHHHHHHHHHCTTEEEEECCTTCHHHHHHHHHHHHHHHSCCCE
T ss_pred             CCCCEEEEECCCcHHHHHHHHHHHHCCCEEEEEeCCHHHHHHHHHHhCCceEEEEecCCCHHHHHHHHHHHHHHcCCCCE
Confidence            35789999997 999999999999999999999999888878777776542   2355555444332       247999


Q ss_pred             EEEcCCC
Q 018067          251 IIDTVSA  257 (361)
Q Consensus       251 vid~~g~  257 (361)
                      +|+++|.
T Consensus       105 lv~nAg~  111 (277)
T 4dqx_A          105 LVNNAGF  111 (277)
T ss_dssp             EEECCCC
T ss_pred             EEECCCc
Confidence            9999984

>4g81_D Putative hexonate dehydrogenase; enzyme function initiative, EFI, structural genomics, dehydr oxidoreductase; 1.90A {Salmonella enterica subsp}

Probab=97.68  E-value=0.00037  Score=60.79  Aligned_cols=99  Identities=22%  Similarity=0.259  Sum_probs=70.2

Q ss_pred             CCCEEEEEcC-ChHHHHHHHHHHHcCCeEEEEeCCchhHHHHHHHc---CCCEE---ecCCCHHHHHHh-------cCCc
Q 018067          183 PGMHVGVVGL-GGLGHVAVKFAKAMGVKVTVISTSPSKKSEAIERL---GADSF---LVSRDQDEMQAA-------MGTM  248 (361)
Q Consensus       183 ~g~~vlV~Ga-g~vG~~a~~la~~~g~~vi~~~~~~~~~~~~~~~~---g~~~v---v~~~~~~~~~~~-------~~g~  248 (361)
                      .|+++||.|+ +++|.++++.+-..|++|+++++++++..+..+++   |.+..   .|-.+++.++++       .++.
T Consensus         8 ~gKvalVTGas~GIG~aia~~la~~Ga~Vvi~~~~~~~~~~~~~~l~~~g~~~~~~~~Dv~~~~~v~~~~~~~~~~~G~i   87 (255)
T 4g81_D            8 TGKTALVTGSARGLGFAYAEGLAAAGARVILNDIRATLLAESVDTLTRKGYDAHGVAFDVTDELAIEAAFSKLDAEGIHV   87 (255)
T ss_dssp             TTCEEEETTCSSHHHHHHHHHHHHTTCEEEECCSCHHHHHHHHHHHHHTTCCEEECCCCTTCHHHHHHHHHHHHHTTCCC
T ss_pred             CCCEEEEeCCCcHHHHHHHHHHHHCCCEEEEEECCHHHHHHHHHHHHhcCCcEEEEEeeCCCHHHHHHHHHHHHHHCCCC
Confidence            6899999987 99999999999999999999999988766655443   44332   244455444332       2479


Q ss_pred             cEEEEcCCCcc-------------------------cHHHHHhcc---ccCCEEEEecCCC
Q 018067          249 DGIIDTVSAVH-------------------------PLMPLIGLL---KSQGKLVLVGAPE  281 (361)
Q Consensus       249 d~vid~~g~~~-------------------------~~~~~~~~l---~~~G~~v~~g~~~  281 (361)
                      |+.++++|...                         ..+.++..+   ..+|++|.+++..
T Consensus        88 DiLVNNAG~~~~~~~~~~~~e~~~~~~~vNl~g~~~~~~~~~p~m~~~~~~G~IVnisS~~  148 (255)
T 4g81_D           88 DILINNAGIQYRKPMVELELENWQKVIDTNLTSAFLVSRSAAKRMIARNSGGKIINIGSLT  148 (255)
T ss_dssp             CEEEECCCCCCCCCGGGCCHHHHHHHHHHHTHHHHHHHHHHHHHHHHHTCCEEEEEECCGG
T ss_pred             cEEEECCCCCCCCChhhCCHHHHHHHHHHHhHHHHHHHHHHHHHHHHccCCCEEEEEeehh
Confidence            99999998521                         223345555   2468999998743

>2wsb_A Galactitol dehydrogenase; oxidoreductase, SDR, rossmann fold, tagatose; HET: NAD; 1.25A {Rhodobacter sphaeroides} PDB: 2wdz_A* 3lqf_A*

Probab=97.68  E-value=0.00036  Score=60.59  Aligned_cols=75  Identities=21%  Similarity=0.340  Sum_probs=57.3

Q ss_pred             CCCEEEEEcC-ChHHHHHHHHHHHcCCeEEEEeCCchhHHHHHHHcCCCE----EecCCCHHHHHHh------cCCccEE
Q 018067          183 PGMHVGVVGL-GGLGHVAVKFAKAMGVKVTVISTSPSKKSEAIERLGADS----FLVSRDQDEMQAA------MGTMDGI  251 (361)
Q Consensus       183 ~g~~vlV~Ga-g~vG~~a~~la~~~g~~vi~~~~~~~~~~~~~~~~g~~~----vv~~~~~~~~~~~------~~g~d~v  251 (361)
                      .++++||.|+ |.+|...++.+...|++|++++++.++...+.++++...    ..|..+.+.+.++      .+++|++
T Consensus        10 ~~k~vlITGasggiG~~la~~l~~~G~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~D~~~~~~~~~~~~~~~~~~~id~l   89 (254)
T 2wsb_A           10 DGACAAVTGAGSGIGLEICRAFAASGARLILIDREAAALDRAAQELGAAVAARIVADVTDAEAMTAAAAEAEAVAPVSIL   89 (254)
T ss_dssp             TTCEEEEETTTSHHHHHHHHHHHHTTCEEEEEESCHHHHHHHHHHHGGGEEEEEECCTTCHHHHHHHHHHHHHHSCCCEE
T ss_pred             CCCEEEEECCCcHHHHHHHHHHHHCCCEEEEEeCCHHHHHHHHHHhcccceeEEEEecCCHHHHHHHHHHHHhhCCCcEE
Confidence            5788999998 999999999999999999999999887766666655332    2355555544433      2589999


Q ss_pred             EEcCCC
Q 018067          252 IDTVSA  257 (361)
Q Consensus       252 id~~g~  257 (361)
                      |+++|.
T Consensus        90 i~~Ag~   95 (254)
T 2wsb_A           90 VNSAGI   95 (254)
T ss_dssp             EECCCC
T ss_pred             EECCcc
Confidence            999984

>4b79_A PA4098, probable short-chain dehydrogenase; oxidoreductase, infectious disease, structure-based inhibito; HET: NAD; 1.98A {Pseudomonas aeruginosa PAO1}

Probab=97.66  E-value=6e-05  Score=65.20  Aligned_cols=98  Identities=15%  Similarity=0.166  Sum_probs=69.8

Q ss_pred             CCCCCEEEEEcC-ChHHHHHHHHHHHcCCeEEEEeCCchhHHHHHHHcCCC---EEecCCCHHHHHHhc---CCccEEEE
Q 018067          181 DKPGMHVGVVGL-GGLGHVAVKFAKAMGVKVTVISTSPSKKSEAIERLGAD---SFLVSRDQDEMQAAM---GTMDGIID  253 (361)
Q Consensus       181 ~~~g~~vlV~Ga-g~vG~~a~~la~~~g~~vi~~~~~~~~~~~~~~~~g~~---~vv~~~~~~~~~~~~---~g~d~vid  253 (361)
                      +-.|+++||.|+ +++|.++++.+...|++|++++++.++....   .+..   ...|-.+++.++++.   ++.|+.++
T Consensus         8 lf~GK~alVTGas~GIG~aia~~la~~Ga~Vv~~~~~~~~~~~~---~~~~~~~~~~Dv~~~~~v~~~~~~~g~iDiLVN   84 (242)
T 4b79_A            8 IYAGQQVLVTGGSSGIGAAIAMQFAELGAEVVALGLDADGVHAP---RHPRIRREELDITDSQRLQRLFEALPRLDVLVN   84 (242)
T ss_dssp             TTTTCEEEEETTTSHHHHHHHHHHHHTTCEEEEEESSTTSTTSC---CCTTEEEEECCTTCHHHHHHHHHHCSCCSEEEE
T ss_pred             CCCCCEEEEeCCCCHHHHHHHHHHHHCCCEEEEEeCCHHHHhhh---hcCCeEEEEecCCCHHHHHHHHHhcCCCCEEEE
Confidence            457999999997 9999999999999999999999987654322   2221   233556666555443   57999999


Q ss_pred             cCCCcc-----------------------cHHHHHhcc-ccCCEEEEecCCC
Q 018067          254 TVSAVH-----------------------PLMPLIGLL-KSQGKLVLVGAPE  281 (361)
Q Consensus       254 ~~g~~~-----------------------~~~~~~~~l-~~~G~~v~~g~~~  281 (361)
                      ++|...                       ..+.++..+ +.+|++|.+++..
T Consensus        85 NAGi~~~~~~~~~~~w~~~~~vNl~g~~~~~~~~~p~m~~~~G~IVnisS~~  136 (242)
T 4b79_A           85 NAGISRDREEYDLATFERVLRLNLSAAMLASQLARPLLAQRGGSILNIASMY  136 (242)
T ss_dssp             CCCCCCGGGGGSHHHHHHHHHHHTHHHHHHHHHHHHHHHHHCEEEEEECCGG
T ss_pred             CCCCCCCcccCCHHHHHHHHHHhhHHHHHHHHHHHHHHHHcCCeEEEEeecc
Confidence            998521                       223344555 3589999998743

>3fwz_A Inner membrane protein YBAL; TRKA-N domain, E.coli, structural genomics, PSI-2, Pro structure initiative; HET: MSE AMP; 1.79A {Escherichia coli k-12}

Probab=97.66  E-value=0.00056  Score=53.80  Aligned_cols=96  Identities=19%  Similarity=0.147  Sum_probs=69.7

Q ss_pred             CCCCEEEEEcCChHHHHHHHHHHHcCCeEEEEeCCchhHHHHHHHcCCCEEe-cCCCHHHHHHhc-CCccEEEEcCCCcc
Q 018067          182 KPGMHVGVVGLGGLGHVAVKFAKAMGVKVTVISTSPSKKSEAIERLGADSFL-VSRDQDEMQAAM-GTMDGIIDTVSAVH  259 (361)
Q Consensus       182 ~~g~~vlV~Gag~vG~~a~~la~~~g~~vi~~~~~~~~~~~~~~~~g~~~vv-~~~~~~~~~~~~-~g~d~vid~~g~~~  259 (361)
                      +-.++|+|+|.|.+|..+++.++..|.+|+++++++++.+.+ ++.|...+. |..+++.+.++. .++|+++-+++...
T Consensus         5 ~~~~~viIiG~G~~G~~la~~L~~~g~~v~vid~~~~~~~~~-~~~g~~~i~gd~~~~~~l~~a~i~~ad~vi~~~~~~~   83 (140)
T 3fwz_A            5 DICNHALLVGYGRVGSLLGEKLLASDIPLVVIETSRTRVDEL-RERGVRAVLGNAANEEIMQLAHLECAKWLILTIPNGY   83 (140)
T ss_dssp             CCCSCEEEECCSHHHHHHHHHHHHTTCCEEEEESCHHHHHHH-HHTTCEEEESCTTSHHHHHHTTGGGCSEEEECCSCHH
T ss_pred             cCCCCEEEECcCHHHHHHHHHHHHCCCCEEEEECCHHHHHHH-HHcCCCEEECCCCCHHHHHhcCcccCCEEEEECCChH
Confidence            345679999999999999999999999999999999887776 457776443 445666665543 47999999999864


Q ss_pred             cHH---HHHhccccCCEEEEec
Q 018067          260 PLM---PLIGLLKSQGKLVLVG  278 (361)
Q Consensus       260 ~~~---~~~~~l~~~G~~v~~g  278 (361)
                      ...   ...+.+.+..+++...
T Consensus        84 ~n~~~~~~a~~~~~~~~iiar~  105 (140)
T 3fwz_A           84 EAGEIVASARAKNPDIEIIARA  105 (140)
T ss_dssp             HHHHHHHHHHHHCSSSEEEEEE
T ss_pred             HHHHHHHHHHHHCCCCeEEEEE
Confidence            222   2333445566666543

>3op4_A 3-oxoacyl-[acyl-carrier protein] reductase; 3-ketoacyl-(acyl-carrier-protein) reductase; HET: MSE NAP; 1.60A {Vibrio cholerae o1 biovar el tor} SCOP: c.2.1.2 PDB: 3rsh_A* 3rro_A* 4i08_A* 3tzk_A 3tzc_A* 3u09_A 3tzh_A 1q7b_A* 1i01_A* 1q7c_A* 2cf2_E

Probab=97.65  E-value=0.00026  Score=61.57  Aligned_cols=75  Identities=23%  Similarity=0.329  Sum_probs=58.2

Q ss_pred             CCCEEEEEcC-ChHHHHHHHHHHHcCCeEEEEeCCchhHHHHHHHcCCC---EEecCCCHHHHHHh-------cCCccEE
Q 018067          183 PGMHVGVVGL-GGLGHVAVKFAKAMGVKVTVISTSPSKKSEAIERLGAD---SFLVSRDQDEMQAA-------MGTMDGI  251 (361)
Q Consensus       183 ~g~~vlV~Ga-g~vG~~a~~la~~~g~~vi~~~~~~~~~~~~~~~~g~~---~vv~~~~~~~~~~~-------~~g~d~v  251 (361)
                      .|+++||.|+ |++|.++++.+...|++|+++++++++...+.+.++..   ...|-.+++.+.++       .+++|++
T Consensus         8 ~gk~~lVTGas~gIG~a~a~~l~~~G~~V~~~~r~~~~~~~~~~~~~~~~~~~~~Dv~d~~~v~~~~~~~~~~~g~iD~l   87 (248)
T 3op4_A            8 EGKVALVTGASRGIGKAIAELLAERGAKVIGTATSESGAQAISDYLGDNGKGMALNVTNPESIEAVLKAITDEFGGVDIL   87 (248)
T ss_dssp             TTCEEEESSCSSHHHHHHHHHHHHTTCEEEEEESSHHHHHHHHHHHGGGEEEEECCTTCHHHHHHHHHHHHHHHCCCSEE
T ss_pred             CCCEEEEeCCCCHHHHHHHHHHHHCCCEEEEEeCCHHHHHHHHHHhcccceEEEEeCCCHHHHHHHHHHHHHHcCCCCEE
Confidence            5789999987 99999999999999999999999988877776666542   22355665544433       2489999


Q ss_pred             EEcCCC
Q 018067          252 IDTVSA  257 (361)
Q Consensus       252 id~~g~  257 (361)
                      |+++|.
T Consensus        88 v~nAg~   93 (248)
T 3op4_A           88 VNNAGI   93 (248)
T ss_dssp             EECCCC
T ss_pred             EECCCC
Confidence            999984

>3gvc_A Oxidoreductase, probable short-chain type dehydrogenase/reductase; ssgcid, decode, niaid, UWPPG, SBRI, structural genomics; 2.45A {Mycobacterium tuberculosis}

Probab=97.65  E-value=0.00029  Score=62.35  Aligned_cols=75  Identities=17%  Similarity=0.295  Sum_probs=58.7

Q ss_pred             CCCEEEEEcC-ChHHHHHHHHHHHcCCeEEEEeCCchhHHHHHHHcCCCE---EecCCCHHHHHHh-------cCCccEE
Q 018067          183 PGMHVGVVGL-GGLGHVAVKFAKAMGVKVTVISTSPSKKSEAIERLGADS---FLVSRDQDEMQAA-------MGTMDGI  251 (361)
Q Consensus       183 ~g~~vlV~Ga-g~vG~~a~~la~~~g~~vi~~~~~~~~~~~~~~~~g~~~---vv~~~~~~~~~~~-------~~g~d~v  251 (361)
                      .|+++||.|+ |++|.++++.+...|++|++++++.++...+.++++...   ..|..+++.+.++       .+++|++
T Consensus        28 ~gk~vlVTGas~gIG~aia~~la~~G~~V~~~~r~~~~~~~~~~~~~~~~~~~~~Dv~d~~~v~~~~~~~~~~~g~iD~l  107 (277)
T 3gvc_A           28 AGKVAIVTGAGAGIGLAVARRLADEGCHVLCADIDGDAADAAATKIGCGAAACRVDVSDEQQIIAMVDACVAAFGGVDKL  107 (277)
T ss_dssp             TTCEEEETTTTSTHHHHHHHHHHHTTCEEEEEESSHHHHHHHHHHHCSSCEEEECCTTCHHHHHHHHHHHHHHHSSCCEE
T ss_pred             CCCEEEEECCCcHHHHHHHHHHHHCCCEEEEEeCCHHHHHHHHHHcCCcceEEEecCCCHHHHHHHHHHHHHHcCCCCEE
Confidence            5788999987 999999999999999999999999888888877776431   2355565544332       2479999


Q ss_pred             EEcCCC
Q 018067          252 IDTVSA  257 (361)
Q Consensus       252 id~~g~  257 (361)
                      |+++|.
T Consensus       108 vnnAg~  113 (277)
T 3gvc_A          108 VANAGV  113 (277)
T ss_dssp             EECCCC
T ss_pred             EECCCC
Confidence            999985

>2a4k_A 3-oxoacyl-[acyl carrier protein] reductase; reductase,hyperthermophIle, structural genomics, PSI, protei structure initiative; 2.30A {Thermus thermophilus} SCOP: c.2.1.2

Probab=97.63  E-value=0.00083  Score=58.90  Aligned_cols=99  Identities=22%  Similarity=0.361  Sum_probs=69.9

Q ss_pred             CCCEEEEEcC-ChHHHHHHHHHHHcCCeEEEEeCCchhHHHHHHHcCCCE---EecCCCHHHHHHh-------cCCccEE
Q 018067          183 PGMHVGVVGL-GGLGHVAVKFAKAMGVKVTVISTSPSKKSEAIERLGADS---FLVSRDQDEMQAA-------MGTMDGI  251 (361)
Q Consensus       183 ~g~~vlV~Ga-g~vG~~a~~la~~~g~~vi~~~~~~~~~~~~~~~~g~~~---vv~~~~~~~~~~~-------~~g~d~v  251 (361)
                      .++++||.|+ |++|.++++.+...|++|++++++.++..++.++++...   ..|..+++.+.++       .+++|++
T Consensus         5 ~~k~vlITGas~gIG~aia~~l~~~G~~V~~~~r~~~~~~~~~~~~~~~~~~~~~D~~~~~~v~~~~~~~~~~~g~iD~l   84 (263)
T 2a4k_A            5 SGKTILVTGAASGIGRAALDLFAREGASLVAVDREERLLAEAVAALEAEAIAVVADVSDPKAVEAVFAEALEEFGRLHGV   84 (263)
T ss_dssp             TTCEEEEESTTSHHHHHHHHHHHHTTCEEEEEESCHHHHHHHHHTCCSSEEEEECCTTSHHHHHHHHHHHHHHHSCCCEE
T ss_pred             CCCEEEEECCCCHHHHHHHHHHHHCCCEEEEEeCCHHHHHHHHHHhcCceEEEEcCCCCHHHHHHHHHHHHHHcCCCcEE
Confidence            4678999997 999999999999999999999999888777766665321   2355555444332       2479999


Q ss_pred             EEcCCCcc-------------------------cHHHHHhccccCCEEEEecCCC
Q 018067          252 IDTVSAVH-------------------------PLMPLIGLLKSQGKLVLVGAPE  281 (361)
Q Consensus       252 id~~g~~~-------------------------~~~~~~~~l~~~G~~v~~g~~~  281 (361)
                      |+++|...                         ..+.++..++.+|+++.+++..
T Consensus        85 vnnAg~~~~~~~~~~~~~~~~~~~~~N~~g~~~l~~~~~~~~~~~g~iv~isS~~  139 (263)
T 2a4k_A           85 AHFAGVAHSALSWNLPLEAWEKVLRVNLTGSFLVARKAGEVLEEGGSLVLTGSVA  139 (263)
T ss_dssp             EEGGGGTTTTC----CHHHHHHHHHHHHHHHHHHHHHHHHHCCTTCEEEEECCCT
T ss_pred             EECCCCCCCCChhhCCHHHHHHHHHHHhHHHHHHHHHHHHHHhcCCEEEEEecch
Confidence            99987421                         1122333343479999998754

>4dry_A 3-oxoacyl-[acyl-carrier-protein] reductase; structural genomics, PSI-biology, NEW YORK structural genomi research consortium, nysgrc; 2.50A {Sinorhizobium meliloti}

Probab=97.63  E-value=0.00024  Score=63.05  Aligned_cols=75  Identities=20%  Similarity=0.254  Sum_probs=54.7

Q ss_pred             CCCEEEEEcC-ChHHHHHHHHHHHcCCeEEEEeCCchhHHHHHHHcC----CC---EEecCCCHHHHHHh-------cCC
Q 018067          183 PGMHVGVVGL-GGLGHVAVKFAKAMGVKVTVISTSPSKKSEAIERLG----AD---SFLVSRDQDEMQAA-------MGT  247 (361)
Q Consensus       183 ~g~~vlV~Ga-g~vG~~a~~la~~~g~~vi~~~~~~~~~~~~~~~~g----~~---~vv~~~~~~~~~~~-------~~g  247 (361)
                      .|+++||.|+ |++|.++++.+...|++|++++++.++...+.+++.    ..   ...|..+++.+.++       .++
T Consensus        32 ~gk~~lVTGas~GIG~aia~~la~~G~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~Dv~d~~~v~~~~~~~~~~~g~  111 (281)
T 4dry_A           32 EGRIALVTGGGTGVGRGIAQALSAEGYSVVITGRRPDVLDAAAGEIGGRTGNIVRAVVCDVGDPDQVAALFAAVRAEFAR  111 (281)
T ss_dssp             --CEEEETTTTSHHHHHHHHHHHHTTCEEEEEESCHHHHHHHHHHHHHHHSSCEEEEECCTTCHHHHHHHHHHHHHHHSC
T ss_pred             CCCEEEEeCCCCHHHHHHHHHHHHCCCEEEEEECCHHHHHHHHHHHHhcCCCeEEEEEcCCCCHHHHHHHHHHHHHHcCC
Confidence            6789999997 999999999999999999999999887666655442    11   12355565543332       257


Q ss_pred             ccEEEEcCCC
Q 018067          248 MDGIIDTVSA  257 (361)
Q Consensus       248 ~d~vid~~g~  257 (361)
                      +|++|+++|.
T Consensus       112 iD~lvnnAG~  121 (281)
T 4dry_A          112 LDLLVNNAGS  121 (281)
T ss_dssp             CSEEEECCCC
T ss_pred             CCEEEECCCC
Confidence            9999999985

>3m1a_A Putative dehydrogenase; short, PSI, MCSG, structural genomics, midwest center for structural genomics, protein structure initiative; 2.00A {Streptomyces avermitilis}

Probab=97.62  E-value=0.00044  Score=61.20  Aligned_cols=75  Identities=16%  Similarity=0.206  Sum_probs=58.4

Q ss_pred             CCCEEEEEcC-ChHHHHHHHHHHHcCCeEEEEeCCchhHHHHHHHcCCCE---EecCCCHHHHHHh-------cCCccEE
Q 018067          183 PGMHVGVVGL-GGLGHVAVKFAKAMGVKVTVISTSPSKKSEAIERLGADS---FLVSRDQDEMQAA-------MGTMDGI  251 (361)
Q Consensus       183 ~g~~vlV~Ga-g~vG~~a~~la~~~g~~vi~~~~~~~~~~~~~~~~g~~~---vv~~~~~~~~~~~-------~~g~d~v  251 (361)
                      .++++||.|+ |++|..+++.+...|++|++++++.++...+.++++...   ..|-.+.+.+.++       .+++|++
T Consensus         4 ~~k~vlVTGas~gIG~~~a~~l~~~G~~V~~~~r~~~~~~~~~~~~~~~~~~~~~Dv~~~~~~~~~~~~~~~~~g~id~l   83 (281)
T 3m1a_A            4 SAKVWLVTGASSGFGRAIAEAAVAAGDTVIGTARRTEALDDLVAAYPDRAEAISLDVTDGERIDVVAADVLARYGRVDVL   83 (281)
T ss_dssp             CCCEEEETTTTSHHHHHHHHHHHHTTCEEEEEESSGGGGHHHHHHCTTTEEEEECCTTCHHHHHHHHHHHHHHHSCCSEE
T ss_pred             CCcEEEEECCCChHHHHHHHHHHHCCCEEEEEeCCHHHHHHHHHhccCCceEEEeeCCCHHHHHHHHHHHHHhCCCCCEE
Confidence            4678999987 999999999999999999999999988888877776432   2355555544432       2479999


Q ss_pred             EEcCCC
Q 018067          252 IDTVSA  257 (361)
Q Consensus       252 id~~g~  257 (361)
                      |+++|.
T Consensus        84 v~~Ag~   89 (281)
T 3m1a_A           84 VNNAGR   89 (281)
T ss_dssp             EECCCC
T ss_pred             EECCCc
Confidence            999985

>2ew8_A (S)-1-phenylethanol dehydrogenase; transferase; 2.10A {Azoarcus SP} SCOP: c.2.1.2 PDB: 2ewm_A*

Probab=97.58  E-value=0.001  Score=57.70  Aligned_cols=75  Identities=16%  Similarity=0.259  Sum_probs=55.6

Q ss_pred             CCCEEEEEcC-ChHHHHHHHHHHHcCCeEEEEeCCc-hhHHHHHHHcCCCE---EecCCCHHHHHHh-------cCCccE
Q 018067          183 PGMHVGVVGL-GGLGHVAVKFAKAMGVKVTVISTSP-SKKSEAIERLGADS---FLVSRDQDEMQAA-------MGTMDG  250 (361)
Q Consensus       183 ~g~~vlV~Ga-g~vG~~a~~la~~~g~~vi~~~~~~-~~~~~~~~~~g~~~---vv~~~~~~~~~~~-------~~g~d~  250 (361)
                      .++++||.|+ |++|..++..+...|++|++++++. ++..+..++.+...   ..|..+++.+.++       .+++|+
T Consensus         6 ~~k~vlVTGas~gIG~~ia~~l~~~G~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~Dv~~~~~v~~~~~~~~~~~g~id~   85 (249)
T 2ew8_A            6 KDKLAVITGGANGIGRAIAERFAVEGADIAIADLVPAPEAEAAIRNLGRRVLTVKCDVSQPGDVEAFGKQVISTFGRCDI   85 (249)
T ss_dssp             TTCEEEEETTTSHHHHHHHHHHHHTTCEEEEEESSCCHHHHHHHHHTTCCEEEEECCTTCHHHHHHHHHHHHHHHSCCCE
T ss_pred             CCCEEEEeCCCcHHHHHHHHHHHHCCCEEEEEcCCchhHHHHHHHhcCCcEEEEEeecCCHHHHHHHHHHHHHHcCCCCE
Confidence            4688999997 9999999999999999999999987 65544445556432   2355565544433       258999


Q ss_pred             EEEcCCC
Q 018067          251 IIDTVSA  257 (361)
Q Consensus       251 vid~~g~  257 (361)
                      +|+++|.
T Consensus        86 lv~nAg~   92 (249)
T 2ew8_A           86 LVNNAGI   92 (249)
T ss_dssp             EEECCCC
T ss_pred             EEECCCC
Confidence            9999984

>3f9i_A 3-oxoacyl-[acyl-carrier-protein] reductase; 3-ketoacyl-(acyl-carrier-protein) reductase, FAT biosynthesis, lipid synthesis, NADP; 2.25A {Rickettsia prowazekii} SCOP: c.2.1.0

Probab=97.57  E-value=0.00055  Score=59.36  Aligned_cols=77  Identities=16%  Similarity=0.252  Sum_probs=59.5

Q ss_pred             CCCCCEEEEEcC-ChHHHHHHHHHHHcCCeEEEEeCCchhHHHHHHHcCCCE---EecCCCHHHHHHhc---CCccEEEE
Q 018067          181 DKPGMHVGVVGL-GGLGHVAVKFAKAMGVKVTVISTSPSKKSEAIERLGADS---FLVSRDQDEMQAAM---GTMDGIID  253 (361)
Q Consensus       181 ~~~g~~vlV~Ga-g~vG~~a~~la~~~g~~vi~~~~~~~~~~~~~~~~g~~~---vv~~~~~~~~~~~~---~g~d~vid  253 (361)
                      ..++++|||.|+ |++|..++..+...|++|++++++.++...+.+++....   ..|..+.+.+.++.   +++|++|+
T Consensus        11 ~~~~k~vlVTGas~gIG~~~a~~l~~~G~~V~~~~r~~~~~~~~~~~~~~~~~~~~~D~~~~~~~~~~~~~~~~id~li~   90 (249)
T 3f9i_A           11 DLTGKTSLITGASSGIGSAIARLLHKLGSKVIISGSNEEKLKSLGNALKDNYTIEVCNLANKEECSNLISKTSNLDILVC   90 (249)
T ss_dssp             CCTTCEEEETTTTSHHHHHHHHHHHHTTCEEEEEESCHHHHHHHHHHHCSSEEEEECCTTSHHHHHHHHHTCSCCSEEEE
T ss_pred             cCCCCEEEEECCCChHHHHHHHHHHHCCCEEEEEcCCHHHHHHHHHHhccCccEEEcCCCCHHHHHHHHHhcCCCCEEEE
Confidence            357899999997 999999999999999999999999988888777766432   23445555444432   47999999


Q ss_pred             cCCC
Q 018067          254 TVSA  257 (361)
Q Consensus       254 ~~g~  257 (361)
                      ++|.
T Consensus        91 ~Ag~   94 (249)
T 3f9i_A           91 NAGI   94 (249)
T ss_dssp             CCC-
T ss_pred             CCCC
Confidence            9984

>2hmt_A YUAA protein; RCK, KTN, KTR, KTRA, ktrab, membrane protein, ION transporter, symporter, transport protein; HET: NAI; 2.20A {Bacillus subtilis} SCOP: c.2.1.9 PDB: 2hms_A* 2hmu_A* 2hmv_A* 2hmw_A* 1lsu_A*

Probab=97.57  E-value=0.00016  Score=56.88  Aligned_cols=75  Identities=19%  Similarity=0.321  Sum_probs=54.9

Q ss_pred             CCCEEEEEcCChHHHHHHHHHHHcCCeEEEEeCCchhHHHHHHHcCCCEEe-cCCCHHHHHHh-cCCccEEEEcCCCc
Q 018067          183 PGMHVGVVGLGGLGHVAVKFAKAMGVKVTVISTSPSKKSEAIERLGADSFL-VSRDQDEMQAA-MGTMDGIIDTVSAV  258 (361)
Q Consensus       183 ~g~~vlV~Gag~vG~~a~~la~~~g~~vi~~~~~~~~~~~~~~~~g~~~vv-~~~~~~~~~~~-~~g~d~vid~~g~~  258 (361)
                      ++++|+|+|+|.+|..+++.+...|.+|+++++++++...+ ++.+...+. +..+.+.+.++ ..++|++|.+++..
T Consensus         5 ~~~~v~I~G~G~iG~~~a~~l~~~g~~v~~~d~~~~~~~~~-~~~~~~~~~~d~~~~~~l~~~~~~~~d~vi~~~~~~   81 (144)
T 2hmt_A            5 KNKQFAVIGLGRFGGSIVKELHRMGHEVLAVDINEEKVNAY-ASYATHAVIANATEENELLSLGIRNFEYVIVAIGAN   81 (144)
T ss_dssp             -CCSEEEECCSHHHHHHHHHHHHTTCCCEEEESCHHHHHTT-TTTCSEEEECCTTCHHHHHTTTGGGCSEEEECCCSC
T ss_pred             cCCcEEEECCCHHHHHHHHHHHHCCCEEEEEeCCHHHHHHH-HHhCCEEEEeCCCCHHHHHhcCCCCCCEEEECCCCc
Confidence            35679999999999999999999999999999887665444 334543322 34455555544 35799999999975

>1iy8_A Levodione reductase; oxidoreductase; HET: NAD; 1.60A {Leifsonia aquatica} SCOP: c.2.1.2

Probab=97.56  E-value=0.00085  Score=58.88  Aligned_cols=75  Identities=20%  Similarity=0.307  Sum_probs=55.3

Q ss_pred             CCCEEEEEcC-ChHHHHHHHHHHHcCCeEEEEeCCchhHHHHHHHc-----CCCE---EecCCCHHHHHHh-------cC
Q 018067          183 PGMHVGVVGL-GGLGHVAVKFAKAMGVKVTVISTSPSKKSEAIERL-----GADS---FLVSRDQDEMQAA-------MG  246 (361)
Q Consensus       183 ~g~~vlV~Ga-g~vG~~a~~la~~~g~~vi~~~~~~~~~~~~~~~~-----g~~~---vv~~~~~~~~~~~-------~~  246 (361)
                      .++++||.|+ |++|..+++.+...|++|++++++.++...+.+++     +...   ..|..+++.+.++       .+
T Consensus        12 ~~k~vlVTGas~gIG~~ia~~l~~~G~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~~D~~~~~~v~~~~~~~~~~~g   91 (267)
T 1iy8_A           12 TDRVVLITGGGSGLGRATAVRLAAEGAKLSLVDVSSEGLEASKAAVLETAPDAEVLTTVADVSDEAQVEAYVTATTERFG   91 (267)
T ss_dssp             TTCEEEEETTTSHHHHHHHHHHHHTTCEEEEEESCHHHHHHHHHHHHHHCTTCCEEEEECCTTSHHHHHHHHHHHHHHHS
T ss_pred             CCCEEEEECCCCHHHHHHHHHHHHCCCEEEEEeCCHHHHHHHHHHHHhhcCCceEEEEEccCCCHHHHHHHHHHHHHHcC
Confidence            5788999997 99999999999999999999999887665554433     4332   2355565544432       24


Q ss_pred             CccEEEEcCCC
Q 018067          247 TMDGIIDTVSA  257 (361)
Q Consensus       247 g~d~vid~~g~  257 (361)
                      ++|++|+++|.
T Consensus        92 ~id~lv~nAg~  102 (267)
T 1iy8_A           92 RIDGFFNNAGI  102 (267)
T ss_dssp             CCSEEEECCCC
T ss_pred             CCCEEEECCCc
Confidence            79999999984

>3e8x_A Putative NAD-dependent epimerase/dehydratase; structural genomics, APC7755, NADP, P protein structure initiative; HET: MSE NAP; 2.10A {Bacillus halodurans}

Probab=97.56  E-value=0.00048  Score=59.14  Aligned_cols=96  Identities=18%  Similarity=0.253  Sum_probs=67.1

Q ss_pred             CCCEEEEEcC-ChHHHHHHHHHHHcCCeEEEEeCCchhHHHHHHHcCC-CEEe-cCCCHHHHHHhcCCccEEEEcCCCcc
Q 018067          183 PGMHVGVVGL-GGLGHVAVKFAKAMGVKVTVISTSPSKKSEAIERLGA-DSFL-VSRDQDEMQAAMGTMDGIIDTVSAVH  259 (361)
Q Consensus       183 ~g~~vlV~Ga-g~vG~~a~~la~~~g~~vi~~~~~~~~~~~~~~~~g~-~~vv-~~~~~~~~~~~~~g~d~vid~~g~~~  259 (361)
                      .+.+|||+|+ |.+|..++..+...|++|++++++.++...+ ...++ ..+. |..  +.+.+..+++|+||+++|...
T Consensus        20 ~~~~ilVtGatG~iG~~l~~~L~~~G~~V~~~~R~~~~~~~~-~~~~~~~~~~~Dl~--~~~~~~~~~~D~vi~~ag~~~   96 (236)
T 3e8x_A           20 QGMRVLVVGANGKVARYLLSELKNKGHEPVAMVRNEEQGPEL-RERGASDIVVANLE--EDFSHAFASIDAVVFAAGSGP   96 (236)
T ss_dssp             -CCEEEEETTTSHHHHHHHHHHHHTTCEEEEEESSGGGHHHH-HHTTCSEEEECCTT--SCCGGGGTTCSEEEECCCCCT
T ss_pred             CCCeEEEECCCChHHHHHHHHHHhCCCeEEEEECChHHHHHH-HhCCCceEEEcccH--HHHHHHHcCCCEEEECCCCCC
Confidence            5789999998 9999999999999999999999998887666 34455 3321 222  334445568999999998531


Q ss_pred             -------------cHHHHHhccc--cCCEEEEecCCC
Q 018067          260 -------------PLMPLIGLLK--SQGKLVLVGAPE  281 (361)
Q Consensus       260 -------------~~~~~~~~l~--~~G~~v~~g~~~  281 (361)
                                   .....++.++  ..++++.++...
T Consensus        97 ~~~~~~~~~~n~~~~~~l~~a~~~~~~~~iv~~SS~~  133 (236)
T 3e8x_A           97 HTGADKTILIDLWGAIKTIQEAEKRGIKRFIMVSSVG  133 (236)
T ss_dssp             TSCHHHHHHTTTHHHHHHHHHHHHHTCCEEEEECCTT
T ss_pred             CCCccccchhhHHHHHHHHHHHHHcCCCEEEEEecCC
Confidence                         1122333333  247999988754

>3tfo_A Putative 3-oxoacyl-(acyl-carrier-protein) reducta; structural genomics, PSI-biology, NEW YORK structural genomi research consortium; 2.08A {Sinorhizobium meliloti}

Probab=97.56  E-value=0.00056  Score=60.08  Aligned_cols=75  Identities=16%  Similarity=0.287  Sum_probs=56.3

Q ss_pred             CCCEEEEEcC-ChHHHHHHHHHHHcCCeEEEEeCCchhHHHHHHHc---CCCE---EecCCCHHHHHHh-------cCCc
Q 018067          183 PGMHVGVVGL-GGLGHVAVKFAKAMGVKVTVISTSPSKKSEAIERL---GADS---FLVSRDQDEMQAA-------MGTM  248 (361)
Q Consensus       183 ~g~~vlV~Ga-g~vG~~a~~la~~~g~~vi~~~~~~~~~~~~~~~~---g~~~---vv~~~~~~~~~~~-------~~g~  248 (361)
                      .++++||.|+ |++|.+++..+...|++|++++++.++...+.+++   +...   ..|-.+++.+.++       .+++
T Consensus         3 ~~k~~lVTGas~GIG~aia~~la~~G~~V~~~~r~~~~~~~~~~~l~~~~~~~~~~~~Dv~d~~~v~~~~~~~~~~~g~i   82 (264)
T 3tfo_A            3 MDKVILITGASGGIGEGIARELGVAGAKILLGARRQARIEAIATEIRDAGGTALAQVLDVTDRHSVAAFAQAAVDTWGRI   82 (264)
T ss_dssp             TTCEEEESSTTSHHHHHHHHHHHHTTCEEEEEESSHHHHHHHHHHHHHTTCEEEEEECCTTCHHHHHHHHHHHHHHHSCC
T ss_pred             CCCEEEEeCCccHHHHHHHHHHHHCCCEEEEEECCHHHHHHHHHHHHhcCCcEEEEEcCCCCHHHHHHHHHHHHHHcCCC
Confidence            4678999997 99999999999999999999999988776665544   4322   2355565544332       2479


Q ss_pred             cEEEEcCCC
Q 018067          249 DGIIDTVSA  257 (361)
Q Consensus       249 d~vid~~g~  257 (361)
                      |++|+++|.
T Consensus        83 D~lVnnAG~   91 (264)
T 3tfo_A           83 DVLVNNAGV   91 (264)
T ss_dssp             CEEEECCCC
T ss_pred             CEEEECCCC
Confidence            999999985

>2egg_A AROE, shikimate 5-dehydrogenase; dimer, X-RAY diffraction, structural genomics, NPPSFA; 2.25A {Geobacillus kaustophilus}

Probab=97.55  E-value=0.00041  Score=62.07  Aligned_cols=96  Identities=14%  Similarity=0.088  Sum_probs=70.7

Q ss_pred             CCCCEEEEEcCChHHHHHHHHHHHcCC-eEEEEeCCchhHHHHHHHcCCC--EEecCCCHHHHHHhcCCccEEEEcCCCc
Q 018067          182 KPGMHVGVVGLGGLGHVAVKFAKAMGV-KVTVISTSPSKKSEAIERLGAD--SFLVSRDQDEMQAAMGTMDGIIDTVSAV  258 (361)
Q Consensus       182 ~~g~~vlV~Gag~vG~~a~~la~~~g~-~vi~~~~~~~~~~~~~~~~g~~--~vv~~~~~~~~~~~~~g~d~vid~~g~~  258 (361)
                      -.+++++|+|+|++|.+++..+...|+ +|+++.++.++.+.++++++..  .+++   .+.+.+...++|+||++++..
T Consensus       139 l~~~~vlVlGaGg~g~aia~~L~~~G~~~V~v~nR~~~ka~~la~~~~~~~~~~~~---~~~~~~~~~~aDivIn~t~~~  215 (297)
T 2egg_A          139 LDGKRILVIGAGGGARGIYFSLLSTAAERIDMANRTVEKAERLVREGDERRSAYFS---LAEAETRLAEYDIIINTTSVG  215 (297)
T ss_dssp             CTTCEEEEECCSHHHHHHHHHHHTTTCSEEEEECSSHHHHHHHHHHSCSSSCCEEC---HHHHHHTGGGCSEEEECSCTT
T ss_pred             CCCCEEEEECcHHHHHHHHHHHHHCCCCEEEEEeCCHHHHHHHHHHhhhccCceee---HHHHHhhhccCCEEEECCCCC
Confidence            367899999999999999999999998 9999999988888888888752  2222   133444556899999999865


Q ss_pred             ccH-----HHHHhccccCCEEEEecCC
Q 018067          259 HPL-----MPLIGLLKSQGKLVLVGAP  280 (361)
Q Consensus       259 ~~~-----~~~~~~l~~~G~~v~~g~~  280 (361)
                      ...     ......++++..++++...
T Consensus       216 ~~~~~~~~~i~~~~l~~~~~v~D~~y~  242 (297)
T 2egg_A          216 MHPRVEVQPLSLERLRPGVIVSDIIYN  242 (297)
T ss_dssp             CSSCCSCCSSCCTTCCTTCEEEECCCS
T ss_pred             CCCCCCCCCCCHHHcCCCCEEEEcCCC
Confidence            410     1123456777778888663

>3r6d_A NAD-dependent epimerase/dehydratase; structural genomics, PSI-biology, midwest center for structu genomics, MCSG, veillo parvula; HET: MLZ; 1.25A {Veillonella parvula dsm 2008} PDB: 4hng_A 4hnh_A* 3r14_A*

Probab=97.55  E-value=0.0005  Score=58.39  Aligned_cols=96  Identities=7%  Similarity=0.077  Sum_probs=68.2

Q ss_pred             CEEEEEcC-ChHHHHHHHHHH-HcCCeEEEEeCCch-hHHHHHHHcCCC-E--EecCCCHHHHHHhcCCccEEEEcCCCc
Q 018067          185 MHVGVVGL-GGLGHVAVKFAK-AMGVKVTVISTSPS-KKSEAIERLGAD-S--FLVSRDQDEMQAAMGTMDGIIDTVSAV  258 (361)
Q Consensus       185 ~~vlV~Ga-g~vG~~a~~la~-~~g~~vi~~~~~~~-~~~~~~~~~g~~-~--vv~~~~~~~~~~~~~g~d~vid~~g~~  258 (361)
                      ++|||+|+ |.+|..+++.+. ..|++|++++++++ +...+. ..+.. .  ..|..+++.+.++..++|++|+++|..
T Consensus         6 k~vlVtGasg~iG~~~~~~l~~~~g~~V~~~~r~~~~~~~~~~-~~~~~~~~~~~D~~d~~~~~~~~~~~d~vv~~ag~~   84 (221)
T 3r6d_A            6 XYITILGAAGQIAQXLTATLLTYTDMHITLYGRQLKTRIPPEI-IDHERVTVIEGSFQNPGXLEQAVTNAEVVFVGAMES   84 (221)
T ss_dssp             SEEEEESTTSHHHHHHHHHHHHHCCCEEEEEESSHHHHSCHHH-HTSTTEEEEECCTTCHHHHHHHHTTCSEEEESCCCC
T ss_pred             EEEEEEeCCcHHHHHHHHHHHhcCCceEEEEecCccccchhhc-cCCCceEEEECCCCCHHHHHHHHcCCCEEEEcCCCC
Confidence            46999997 999999999888 89999999999877 554442 12322 1  235667777777778999999999973


Q ss_pred             cc-HHHHHhcccc--CCEEEEecCCC
Q 018067          259 HP-LMPLIGLLKS--QGKLVLVGAPE  281 (361)
Q Consensus       259 ~~-~~~~~~~l~~--~G~~v~~g~~~  281 (361)
                      .. ....++.++.  .+++|.++...
T Consensus        85 n~~~~~~~~~~~~~~~~~iv~iSs~~  110 (221)
T 3r6d_A           85 GSDMASIVKALSRXNIRRVIGVSMAG  110 (221)
T ss_dssp             HHHHHHHHHHHHHTTCCEEEEEEETT
T ss_pred             ChhHHHHHHHHHhcCCCeEEEEeece
Confidence            20 2344444543  36899887643

>3ijr_A Oxidoreductase, short chain dehydrogenase/reducta; structural genomics, infectious D center for structural genomics of infectious diseases; HET: NAD; 2.05A {Bacillus anthracis str} PDB: 3i3o_A*

Probab=97.54  E-value=0.0012  Score=58.89  Aligned_cols=98  Identities=13%  Similarity=0.197  Sum_probs=67.9

Q ss_pred             CCCEEEEEcC-ChHHHHHHHHHHHcCCeEEEEeCCchhHHH----HHHHcCCCE---EecCCCHHHHHHh-------cCC
Q 018067          183 PGMHVGVVGL-GGLGHVAVKFAKAMGVKVTVISTSPSKKSE----AIERLGADS---FLVSRDQDEMQAA-------MGT  247 (361)
Q Consensus       183 ~g~~vlV~Ga-g~vG~~a~~la~~~g~~vi~~~~~~~~~~~----~~~~~g~~~---vv~~~~~~~~~~~-------~~g  247 (361)
                      .|+++||.|+ |++|.++++.+...|++|++++++.++..+    ..++.+...   ..|..+++.+.++       .++
T Consensus        46 ~gk~vlVTGas~GIG~aia~~la~~G~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~Dv~d~~~v~~~~~~~~~~~g~  125 (291)
T 3ijr_A           46 KGKNVLITGGDSGIGRAVSIAFAKEGANIAIAYLDEEGDANETKQYVEKEGVKCVLLPGDLSDEQHCKDIVQETVRQLGS  125 (291)
T ss_dssp             TTCEEEEETTTSHHHHHHHHHHHHTTCEEEEEESSCHHHHHHHHHHHHTTTCCEEEEESCTTSHHHHHHHHHHHHHHHSS
T ss_pred             CCCEEEEeCCCcHHHHHHHHHHHHCCCEEEEEeCCchHHHHHHHHHHHhcCCcEEEEECCCCCHHHHHHHHHHHHHHcCC
Confidence            5789999997 999999999999999999999988754322    223344432   2255555443332       247


Q ss_pred             ccEEEEcCCCcc--------------------------cHHHHHhccccCCEEEEecCC
Q 018067          248 MDGIIDTVSAVH--------------------------PLMPLIGLLKSQGKLVLVGAP  280 (361)
Q Consensus       248 ~d~vid~~g~~~--------------------------~~~~~~~~l~~~G~~v~~g~~  280 (361)
                      +|++|+++|...                          ..+.++..++++|+++.+++.
T Consensus       126 iD~lvnnAg~~~~~~~~~~~~~~~~~~~~~vN~~g~~~l~~~~~~~~~~~g~iv~isS~  184 (291)
T 3ijr_A          126 LNILVNNVAQQYPQQGLEYITAEQLEKTFRINIFSYFHVTKAALSHLKQGDVIINTASI  184 (291)
T ss_dssp             CCEEEECCCCCCCCSSGGGCCHHHHHHHHHHHTHHHHHHHHHHHTTCCTTCEEEEECCT
T ss_pred             CCEEEECCCCcCCCCCcccCCHHHHHHHHHHHhHHHHHHHHHHHHHHhhCCEEEEEech
Confidence            999999987421                          223455566788999999864

>3llv_A Exopolyphosphatase-related protein; NAD(P)-binding, rossmann, PSI, M structural genomics; 1.70A {Archaeoglobus fulgidus}

Probab=97.53  E-value=0.00048  Score=54.12  Aligned_cols=75  Identities=21%  Similarity=0.129  Sum_probs=59.2

Q ss_pred             CCEEEEEcCChHHHHHHHHHHHcCCeEEEEeCCchhHHHHHHHcCCCEE-ecCCCHHHHHHhc-CCccEEEEcCCCcc
Q 018067          184 GMHVGVVGLGGLGHVAVKFAKAMGVKVTVISTSPSKKSEAIERLGADSF-LVSRDQDEMQAAM-GTMDGIIDTVSAVH  259 (361)
Q Consensus       184 g~~vlV~Gag~vG~~a~~la~~~g~~vi~~~~~~~~~~~~~~~~g~~~v-v~~~~~~~~~~~~-~g~d~vid~~g~~~  259 (361)
                      ..+++|+|+|.+|..+++.+...|.+|+++++++++.+.+ ++.+...+ .|..+++.+.++. .++|++|.+++...
T Consensus         6 ~~~v~I~G~G~iG~~la~~L~~~g~~V~~id~~~~~~~~~-~~~~~~~~~gd~~~~~~l~~~~~~~~d~vi~~~~~~~   82 (141)
T 3llv_A            6 RYEYIVIGSEAAGVGLVRELTAAGKKVLAVDKSKEKIELL-EDEGFDAVIADPTDESFYRSLDLEGVSAVLITGSDDE   82 (141)
T ss_dssp             CCSEEEECCSHHHHHHHHHHHHTTCCEEEEESCHHHHHHH-HHTTCEEEECCTTCHHHHHHSCCTTCSEEEECCSCHH
T ss_pred             CCEEEEECCCHHHHHHHHHHHHCCCeEEEEECCHHHHHHH-HHCCCcEEECCCCCHHHHHhCCcccCCEEEEecCCHH
Confidence            4679999999999999999999999999999998877666 45565433 2556666666653 47999999999754

>1lss_A TRK system potassium uptake protein TRKA homolog; KTN domain, NAD, RCK domain, potassium transport, potassium channel, KTRA; HET: NAD; 2.30A {Methanocaldococcus jannaschii} SCOP: c.2.1.9

Probab=97.52  E-value=0.0009  Score=52.12  Aligned_cols=76  Identities=17%  Similarity=0.198  Sum_probs=57.2

Q ss_pred             CCEEEEEcCChHHHHHHHHHHHcCCeEEEEeCCchhHHHHHHHcCCCEEe-cCCCHHHHHHh-cCCccEEEEcCCCcc
Q 018067          184 GMHVGVVGLGGLGHVAVKFAKAMGVKVTVISTSPSKKSEAIERLGADSFL-VSRDQDEMQAA-MGTMDGIIDTVSAVH  259 (361)
Q Consensus       184 g~~vlV~Gag~vG~~a~~la~~~g~~vi~~~~~~~~~~~~~~~~g~~~vv-~~~~~~~~~~~-~~g~d~vid~~g~~~  259 (361)
                      +.+|+|+|+|.+|...++.+...|.+|+++++++++...+.+.++...+. +..+.+.+... ..++|+||.+++...
T Consensus         4 ~m~i~IiG~G~iG~~~a~~L~~~g~~v~~~d~~~~~~~~~~~~~~~~~~~~d~~~~~~l~~~~~~~~d~vi~~~~~~~   81 (140)
T 1lss_A            4 GMYIIIAGIGRVGYTLAKSLSEKGHDIVLIDIDKDICKKASAEIDALVINGDCTKIKTLEDAGIEDADMYIAVTGKEE   81 (140)
T ss_dssp             -CEEEEECCSHHHHHHHHHHHHTTCEEEEEESCHHHHHHHHHHCSSEEEESCTTSHHHHHHTTTTTCSEEEECCSCHH
T ss_pred             CCEEEEECCCHHHHHHHHHHHhCCCeEEEEECCHHHHHHHHHhcCcEEEEcCCCCHHHHHHcCcccCCEEEEeeCCch
Confidence            45799999999999999999999999999999888776675556654332 34445554443 357999999998764

>3l6e_A Oxidoreductase, short-chain dehydrogenase/reducta; structural genomics, PSI-2, protein structure initiative; 2.30A {Aeromonas hydrophila subsp} SCOP: c.2.1.0

Probab=97.52  E-value=0.001  Score=57.26  Aligned_cols=74  Identities=16%  Similarity=0.162  Sum_probs=56.6

Q ss_pred             CCEEEEEcC-ChHHHHHHHHHHHcCCeEEEEeCCchhHHHHHHHcCCC---EEecCCCHHHHHHh-------cCCccEEE
Q 018067          184 GMHVGVVGL-GGLGHVAVKFAKAMGVKVTVISTSPSKKSEAIERLGAD---SFLVSRDQDEMQAA-------MGTMDGII  252 (361)
Q Consensus       184 g~~vlV~Ga-g~vG~~a~~la~~~g~~vi~~~~~~~~~~~~~~~~g~~---~vv~~~~~~~~~~~-------~~g~d~vi  252 (361)
                      ++++||.|+ |++|.+++..+...|++|++++++.++..++.++++..   ...|-.+++.+.++       .+++|++|
T Consensus         3 ~k~vlVTGas~GIG~a~a~~l~~~G~~V~~~~r~~~~~~~~~~~~~~~~~~~~~D~~~~~~v~~~~~~~~~~~g~id~lv   82 (235)
T 3l6e_A            3 LGHIIVTGAGSGLGRALTIGLVERGHQVSMMGRRYQRLQQQELLLGNAVIGIVADLAHHEDVDVAFAAAVEWGGLPELVL   82 (235)
T ss_dssp             CCEEEEESTTSHHHHHHHHHHHHTTCEEEEEESCHHHHHHHHHHHGGGEEEEECCTTSHHHHHHHHHHHHHHHCSCSEEE
T ss_pred             CCEEEEECCCCHHHHHHHHHHHHCCCEEEEEECCHHHHHHHHHHhcCCceEEECCCCCHHHHHHHHHHHHHhcCCCcEEE
Confidence            578999997 99999999999999999999999988877776666532   12345555443332       24799999


Q ss_pred             EcCCC
Q 018067          253 DTVSA  257 (361)
Q Consensus       253 d~~g~  257 (361)
                      +++|.
T Consensus        83 nnAg~   87 (235)
T 3l6e_A           83 HCAGT   87 (235)
T ss_dssp             EECCC
T ss_pred             ECCCC
Confidence            99985

>3tjr_A Short chain dehydrogenase; structural genomics, seattle structural genomics center for infectious disease, ssgcid, SCD, NAD; HET: UNL; 1.60A {Mycobacterium avium subsp}

Probab=97.52  E-value=0.00045  Score=61.92  Aligned_cols=76  Identities=21%  Similarity=0.273  Sum_probs=57.3

Q ss_pred             CCCCEEEEEcC-ChHHHHHHHHHHHcCCeEEEEeCCchhHHHHHHHc---CCC---EEecCCCHHHHHHh-------cCC
Q 018067          182 KPGMHVGVVGL-GGLGHVAVKFAKAMGVKVTVISTSPSKKSEAIERL---GAD---SFLVSRDQDEMQAA-------MGT  247 (361)
Q Consensus       182 ~~g~~vlV~Ga-g~vG~~a~~la~~~g~~vi~~~~~~~~~~~~~~~~---g~~---~vv~~~~~~~~~~~-------~~g  247 (361)
                      -.|+++||.|+ |++|..++..+...|++|++++++.++...+.+++   +..   ...|..+.+.+.++       .++
T Consensus        29 l~gk~vlVTGas~gIG~~la~~l~~~G~~V~~~~r~~~~~~~~~~~l~~~~~~~~~~~~Dv~d~~~v~~~~~~~~~~~g~  108 (301)
T 3tjr_A           29 FDGRAAVVTGGASGIGLATATEFARRGARLVLSDVDQPALEQAVNGLRGQGFDAHGVVCDVRHLDEMVRLADEAFRLLGG  108 (301)
T ss_dssp             STTCEEEEETTTSHHHHHHHHHHHHTTCEEEEEESCHHHHHHHHHHHHHTTCCEEEEECCTTCHHHHHHHHHHHHHHHSS
T ss_pred             cCCCEEEEeCCCCHHHHHHHHHHHHCCCEEEEEECCHHHHHHHHHHHHhcCCceEEEEccCCCHHHHHHHHHHHHHhCCC
Confidence            36789999998 99999999999999999999999988776665544   332   12355565544333       247


Q ss_pred             ccEEEEcCCC
Q 018067          248 MDGIIDTVSA  257 (361)
Q Consensus       248 ~d~vid~~g~  257 (361)
                      +|++|+++|.
T Consensus       109 id~lvnnAg~  118 (301)
T 3tjr_A          109 VDVVFSNAGI  118 (301)
T ss_dssp             CSEEEECCCC
T ss_pred             CCEEEECCCc
Confidence            9999999984

>1xg5_A ARPG836; short chain dehydrogenase, human, SGC, structural genomics, structural genomics consortium, oxidoreductase; HET: NAP; 1.53A {Homo sapiens} SCOP: c.2.1.2

Probab=97.51  E-value=0.00058  Score=60.32  Aligned_cols=75  Identities=16%  Similarity=0.168  Sum_probs=54.3

Q ss_pred             CCCEEEEEcC-ChHHHHHHHHHHHcCCeEEEEeCCchhHHHHHHHc---CC--C---EEecCCCHHHHHHh-------cC
Q 018067          183 PGMHVGVVGL-GGLGHVAVKFAKAMGVKVTVISTSPSKKSEAIERL---GA--D---SFLVSRDQDEMQAA-------MG  246 (361)
Q Consensus       183 ~g~~vlV~Ga-g~vG~~a~~la~~~g~~vi~~~~~~~~~~~~~~~~---g~--~---~vv~~~~~~~~~~~-------~~  246 (361)
                      .++++||.|+ |.+|..+++.+...|++|++++++.++...+.+++   +.  .   ...|..+++.+.++       .+
T Consensus        31 ~~k~vlVTGasggIG~~la~~l~~~G~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~~Dl~~~~~v~~~~~~~~~~~g  110 (279)
T 1xg5_A           31 RDRLALVTGASGGIGAAVARALVQQGLKVVGCARTVGNIEELAAECKSAGYPGTLIPYRCDLSNEEDILSMFSAIRSQHS  110 (279)
T ss_dssp             TTCEEEEESTTSHHHHHHHHHHHHTTCEEEEEESCHHHHHHHHHHHHHTTCSSEEEEEECCTTCHHHHHHHHHHHHHHHC
T ss_pred             CCCEEEEECCCchHHHHHHHHHHHCCCEEEEEECChHHHHHHHHHHHhcCCCceEEEEEecCCCHHHHHHHHHHHHHhCC
Confidence            4688999997 99999999999999999999999877665554332   32  1   12355555544332       24


Q ss_pred             CccEEEEcCCC
Q 018067          247 TMDGIIDTVSA  257 (361)
Q Consensus       247 g~d~vid~~g~  257 (361)
                      ++|++|+++|.
T Consensus       111 ~iD~vi~~Ag~  121 (279)
T 1xg5_A          111 GVDICINNAGL  121 (279)
T ss_dssp             CCSEEEECCCC
T ss_pred             CCCEEEECCCC
Confidence            79999999984

>3tnl_A Shikimate dehydrogenase; structural genomics, center for structural genomics of infec diseases, csgid; HET: NAD SKM; 1.45A {Listeria monocytogenes} PDB: 3toz_A*

Probab=97.50  E-value=0.00046  Score=62.05  Aligned_cols=107  Identities=13%  Similarity=0.196  Sum_probs=71.4

Q ss_pred             hHhhhcCCCCCCCEEEEEcCChHHHHHHHHHHHcCC-eEEEEeCC---chhHHHHHHHcC----CC-EEecCCCHHHHHH
Q 018067          173 SPLRFYGLDKPGMHVGVVGLGGLGHVAVKFAKAMGV-KVTVISTS---PSKKSEAIERLG----AD-SFLVSRDQDEMQA  243 (361)
Q Consensus       173 ~~l~~~~~~~~g~~vlV~Gag~vG~~a~~la~~~g~-~vi~~~~~---~~~~~~~~~~~g----~~-~vv~~~~~~~~~~  243 (361)
                      .+|.....--.|+++||+|+|++|.+++..+...|+ +|+++.|+   .++.++++++++    .. .+++..+.+.+.+
T Consensus       143 ~~L~~~~~~l~gk~~lVlGaGG~g~aia~~L~~~Ga~~V~i~nR~~~~~~~a~~la~~~~~~~~~~~~~~~~~~~~~l~~  222 (315)
T 3tnl_A          143 RALKEAGHDIIGKKMTICGAGGAATAICIQAALDGVKEISIFNRKDDFYANAEKTVEKINSKTDCKAQLFDIEDHEQLRK  222 (315)
T ss_dssp             HHHHHTTCCCTTSEEEEECCSHHHHHHHHHHHHTTCSEEEEEECSSTTHHHHHHHHHHHHHHSSCEEEEEETTCHHHHHH
T ss_pred             HHHHHcCCCccCCEEEEECCChHHHHHHHHHHHCCCCEEEEEECCCchHHHHHHHHHHhhhhcCCceEEeccchHHHHHh
Confidence            344443322468999999999999999999999999 89999998   666666655543    22 3445555444455


Q ss_pred             hcCCccEEEEcCCCccc-----HHH-HHhccccCCEEEEecC
Q 018067          244 AMGTMDGIIDTVSAVHP-----LMP-LIGLLKSQGKLVLVGA  279 (361)
Q Consensus       244 ~~~g~d~vid~~g~~~~-----~~~-~~~~l~~~G~~v~~g~  279 (361)
                      ....+|+||++++....     ... ....++++..++++-.
T Consensus       223 ~l~~aDiIINaTp~Gm~~~~~~~p~~~~~~l~~~~~V~DlvY  264 (315)
T 3tnl_A          223 EIAESVIFTNATGVGMKPFEGETLLPSADMLRPELIVSDVVY  264 (315)
T ss_dssp             HHHTCSEEEECSSTTSTTSTTCCSCCCGGGCCTTCEEEESCC
T ss_pred             hhcCCCEEEECccCCCCCCCCCCCCCcHHHcCCCCEEEEecc
Confidence            55579999999864320     001 2345666666666654

>1nyt_A Shikimate 5-dehydrogenase; alpha/beta domains, WIDE cleft separation, oxidoreductase; HET: NAP; 1.50A {Escherichia coli} SCOP: c.2.1.7 c.58.1.5

Probab=97.50  E-value=0.0003  Score=62.12  Aligned_cols=105  Identities=16%  Similarity=0.142  Sum_probs=69.6

Q ss_pred             HhhhcCCCCCCCEEEEEcCChHHHHHHHHHHHcCCeEEEEeCCchhHHHHHHHcCCCEEecCCCHHHHHHhcCCccEEEE
Q 018067          174 PLRFYGLDKPGMHVGVVGLGGLGHVAVKFAKAMGVKVTVISTSPSKKSEAIERLGADSFLVSRDQDEMQAAMGTMDGIID  253 (361)
Q Consensus       174 ~l~~~~~~~~g~~vlV~Gag~vG~~a~~la~~~g~~vi~~~~~~~~~~~~~~~~g~~~vv~~~~~~~~~~~~~g~d~vid  253 (361)
                      +|.+.+.--++++++|+|+|++|.++++.+...|++|+++.++.++.+.++++++...-++..+.+.+.+  +++|++|+
T Consensus       109 ~L~~~~~~l~~k~vlViGaGg~g~a~a~~L~~~G~~V~v~~R~~~~~~~la~~~~~~~~~~~~~~~~~~~--~~~DivVn  186 (271)
T 1nyt_A          109 DLERLSFIRPGLRILLIGAGGASRGVLLPLLSLDCAVTITNRTVSRAEELAKLFAHTGSIQALSMDELEG--HEFDLIIN  186 (271)
T ss_dssp             HHHHHTCCCTTCEEEEECCSHHHHHHHHHHHHTTCEEEEECSSHHHHHHHHHHTGGGSSEEECCSGGGTT--CCCSEEEE
T ss_pred             HHHhcCcCcCCCEEEEECCcHHHHHHHHHHHHcCCEEEEEECCHHHHHHHHHHhhccCCeeEecHHHhcc--CCCCEEEE
Confidence            3444332236889999999999999999999999999999999888778877776410011111111111  68999999


Q ss_pred             cCCCcccHH---HHHhccccCCEEEEecCC
Q 018067          254 TVSAVHPLM---PLIGLLKSQGKLVLVGAP  280 (361)
Q Consensus       254 ~~g~~~~~~---~~~~~l~~~G~~v~~g~~  280 (361)
                      +++....-.   .....++++..++.+...
T Consensus       187 ~t~~~~~~~~~~i~~~~l~~~~~v~D~~y~  216 (271)
T 1nyt_A          187 ATSSGISGDIPAIPSSLIHPGIYCYDMFYQ  216 (271)
T ss_dssp             CCSCGGGTCCCCCCGGGCCTTCEEEESCCC
T ss_pred             CCCCCCCCCCCCCCHHHcCCCCEEEEeccC
Confidence            999754200   112345666677777654

>3v2g_A 3-oxoacyl-[acyl-carrier-protein] reductase; structural genomics, PSI-biology, protein structure initiati nysgrc; 2.30A {Sinorhizobium meliloti}

Probab=97.50  E-value=0.0014  Score=57.79  Aligned_cols=99  Identities=18%  Similarity=0.323  Sum_probs=67.5

Q ss_pred             CCCCEEEEEcC-ChHHHHHHHHHHHcCCeEEEEeCCc-hhHHHHHH---HcCCCE---EecCCCHHHHHHh-------cC
Q 018067          182 KPGMHVGVVGL-GGLGHVAVKFAKAMGVKVTVISTSP-SKKSEAIE---RLGADS---FLVSRDQDEMQAA-------MG  246 (361)
Q Consensus       182 ~~g~~vlV~Ga-g~vG~~a~~la~~~g~~vi~~~~~~-~~~~~~~~---~~g~~~---vv~~~~~~~~~~~-------~~  246 (361)
                      -.|+++||.|+ |++|.++++.+...|++|+++++.. ++.+.+.+   ..|...   ..|..+++.+.++       .+
T Consensus        29 l~gk~~lVTGas~GIG~aia~~la~~G~~V~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~Dv~d~~~v~~~~~~~~~~~g  108 (271)
T 3v2g_A           29 LAGKTAFVTGGSRGIGAAIAKRLALEGAAVALTYVNAAERAQAVVSEIEQAGGRAVAIRADNRDAEAIEQAIRETVEALG  108 (271)
T ss_dssp             CTTCEEEEETTTSHHHHHHHHHHHHTTCEEEEEESSCHHHHHHHHHHHHHTTCCEEEEECCTTCHHHHHHHHHHHHHHHS
T ss_pred             CCCCEEEEeCCCcHHHHHHHHHHHHCCCEEEEEeCCCHHHHHHHHHHHHhcCCcEEEEECCCCCHHHHHHHHHHHHHHcC
Confidence            36789999997 9999999999999999999986654 33333333   335432   2345555443332       24


Q ss_pred             CccEEEEcCCCcc-------------------------cHHHHHhccccCCEEEEecCC
Q 018067          247 TMDGIIDTVSAVH-------------------------PLMPLIGLLKSQGKLVLVGAP  280 (361)
Q Consensus       247 g~d~vid~~g~~~-------------------------~~~~~~~~l~~~G~~v~~g~~  280 (361)
                      ++|++|+++|...                         ..+.++..++++|+++.+++.
T Consensus       109 ~iD~lvnnAg~~~~~~~~~~~~~~~~~~~~vN~~g~~~~~~~~~~~m~~~g~iv~isS~  167 (271)
T 3v2g_A          109 GLDILVNSAGIWHSAPLEETTVADFDEVMAVNFRAPFVAIRSASRHLGDGGRIITIGSN  167 (271)
T ss_dssp             CCCEEEECCCCCCCCCGGGCCHHHHHHHHHHHTHHHHHHHHHHHHHCCTTCEEEEECCG
T ss_pred             CCcEEEECCCCCCCCChhhCCHHHHHHHHHHHhHHHHHHHHHHHHHHhcCCEEEEEeCh
Confidence            8999999998521                         233455567778999999763

>3gem_A Short chain dehydrogenase; structural genomics, APC65077, oxidoreductase, PSI-2, protein structure initiative; 1.83A {Pseudomonas syringae PV}

Probab=97.49  E-value=0.00057  Score=59.84  Aligned_cols=75  Identities=11%  Similarity=0.120  Sum_probs=56.2

Q ss_pred             CCCEEEEEcC-ChHHHHHHHHHHHcCCeEEEEeCCchhHHHHHHHcCCCE-EecCCCHHHHHHh-------cCCccEEEE
Q 018067          183 PGMHVGVVGL-GGLGHVAVKFAKAMGVKVTVISTSPSKKSEAIERLGADS-FLVSRDQDEMQAA-------MGTMDGIID  253 (361)
Q Consensus       183 ~g~~vlV~Ga-g~vG~~a~~la~~~g~~vi~~~~~~~~~~~~~~~~g~~~-vv~~~~~~~~~~~-------~~g~d~vid  253 (361)
                      .++++||.|+ |++|.++++.+...|++|++++++.++.....++.++.. ..|..+++.+.++       .+++|++|+
T Consensus        26 ~~k~vlVTGas~gIG~aia~~l~~~G~~V~~~~r~~~~~~~~~~~~~~~~~~~Dv~~~~~v~~~~~~~~~~~g~iD~lv~  105 (260)
T 3gem_A           26 SSAPILITGASQRVGLHCALRLLEHGHRVIISYRTEHASVTELRQAGAVALYGDFSCETGIMAFIDLLKTQTSSLRAVVH  105 (260)
T ss_dssp             -CCCEEESSTTSHHHHHHHHHHHHTTCCEEEEESSCCHHHHHHHHHTCEEEECCTTSHHHHHHHHHHHHHHCSCCSEEEE
T ss_pred             CCCEEEEECCCCHHHHHHHHHHHHCCCEEEEEeCChHHHHHHHHhcCCeEEECCCCCHHHHHHHHHHHHHhcCCCCEEEE
Confidence            4678999987 999999999999999999999999877655556666542 2355565443332       247999999


Q ss_pred             cCCC
Q 018067          254 TVSA  257 (361)
Q Consensus       254 ~~g~  257 (361)
                      ++|.
T Consensus       106 nAg~  109 (260)
T 3gem_A          106 NASE  109 (260)
T ss_dssp             CCCC
T ss_pred             CCCc
Confidence            9984

>3f1l_A Uncharacterized oxidoreductase YCIK; E. coli, NADP+,; 0.95A {Escherichia coli K12} SCOP: c.2.1.0 PDB: 3f1k_A 3e9q_A* 3f5q_A 3gz4_A* 3f5s_A 3gy0_A* 3iah_A* 3g1t_A

Probab=97.49  E-value=0.0012  Score=57.46  Aligned_cols=76  Identities=17%  Similarity=0.250  Sum_probs=55.2

Q ss_pred             CCCCEEEEEcC-ChHHHHHHHHHHHcCCeEEEEeCCchhHHHHHHHc----C--CC-EEecC--CCHHHHHHh-------
Q 018067          182 KPGMHVGVVGL-GGLGHVAVKFAKAMGVKVTVISTSPSKKSEAIERL----G--AD-SFLVS--RDQDEMQAA-------  244 (361)
Q Consensus       182 ~~g~~vlV~Ga-g~vG~~a~~la~~~g~~vi~~~~~~~~~~~~~~~~----g--~~-~vv~~--~~~~~~~~~-------  244 (361)
                      -.|+++||.|+ |++|.++++.+...|++|++++++.++..++.+++    +  .. ...|.  .+.+.+.++       
T Consensus        10 l~~k~vlVTGas~gIG~aia~~l~~~G~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~D~~~~~~~~~~~~~~~~~~~   89 (252)
T 3f1l_A           10 LNDRIILVTGASDGIGREAAMTYARYGATVILLGRNEEKLRQVASHINEETGRQPQWFILDLLTCTSENCQQLAQRIAVN   89 (252)
T ss_dssp             TTTCEEEEESTTSHHHHHHHHHHHHTTCEEEEEESCHHHHHHHHHHHHHHHSCCCEEEECCTTTCCHHHHHHHHHHHHHH
T ss_pred             cCCCEEEEeCCCChHHHHHHHHHHHCCCEEEEEeCCHHHHHHHHHHHHhhcCCCceEEEEecccCCHHHHHHHHHHHHHh
Confidence            36789999997 99999999999999999999999988766655443    2  21 12344  444433322       


Q ss_pred             cCCccEEEEcCCC
Q 018067          245 MGTMDGIIDTVSA  257 (361)
Q Consensus       245 ~~g~d~vid~~g~  257 (361)
                      .+++|++|+++|.
T Consensus        90 ~g~id~lv~nAg~  102 (252)
T 3f1l_A           90 YPRLDGVLHNAGL  102 (252)
T ss_dssp             CSCCSEEEECCCC
T ss_pred             CCCCCEEEECCcc
Confidence            2479999999985

>2z1n_A Dehydrogenase; reductase, SDR, oxidoreductase; 1.80A {Aeropyrum pernix}

Probab=97.49  E-value=0.00049  Score=60.17  Aligned_cols=75  Identities=19%  Similarity=0.218  Sum_probs=55.0

Q ss_pred             CCCEEEEEcC-ChHHHHHHHHHHHcCCeEEEEeCCchhHHHHHHHc-----CCC-E--EecCCCHHHHHHhcC------C
Q 018067          183 PGMHVGVVGL-GGLGHVAVKFAKAMGVKVTVISTSPSKKSEAIERL-----GAD-S--FLVSRDQDEMQAAMG------T  247 (361)
Q Consensus       183 ~g~~vlV~Ga-g~vG~~a~~la~~~g~~vi~~~~~~~~~~~~~~~~-----g~~-~--vv~~~~~~~~~~~~~------g  247 (361)
                      .++++||.|+ |++|..++..+...|++|++++++.++...+.+++     +.. .  ..|..+++.+.++..      +
T Consensus         6 ~~k~vlVTGas~gIG~~ia~~l~~~G~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~~D~~~~~~v~~~~~~~~~~~g   85 (260)
T 2z1n_A            6 QGKLAVVTAGSSGLGFASALELARNGARLLLFSRNREKLEAAASRIASLVSGAQVDIVAGDIREPGDIDRLFEKARDLGG   85 (260)
T ss_dssp             TTCEEEEETTTSHHHHHHHHHHHHTTCEEEEEESCHHHHHHHHHHHHHHSTTCCEEEEECCTTCHHHHHHHHHHHHHTTC
T ss_pred             CCCEEEEECCCchHHHHHHHHHHHCCCEEEEEeCCHHHHHHHHHHHHhcCCCCeEEEEEccCCCHHHHHHHHHHHHHhcC
Confidence            4688999997 99999999999999999999999887766554443     312 1  235566554443321      4


Q ss_pred             ccEEEEcCCC
Q 018067          248 MDGIIDTVSA  257 (361)
Q Consensus       248 ~d~vid~~g~  257 (361)
                      +|++|+++|.
T Consensus        86 id~lv~~Ag~   95 (260)
T 2z1n_A           86 ADILVYSTGG   95 (260)
T ss_dssp             CSEEEECCCC
T ss_pred             CCEEEECCCC
Confidence            9999999984

>2gdz_A NAD+-dependent 15-hydroxyprostaglandin dehydrogen; dehydrogenase, structural genomics, SH dehydrogenase/reductase, inflammation; HET: NAD; 1.65A {Homo sapiens} SCOP: c.2.1.2

Probab=97.49  E-value=0.0013  Score=57.54  Aligned_cols=98  Identities=14%  Similarity=0.187  Sum_probs=66.6

Q ss_pred             CCCEEEEEcC-ChHHHHHHHHHHHcCCeEEEEeCCchhHHHHHHHcC-----CC---EEecCCCHHHHHHh-------cC
Q 018067          183 PGMHVGVVGL-GGLGHVAVKFAKAMGVKVTVISTSPSKKSEAIERLG-----AD---SFLVSRDQDEMQAA-------MG  246 (361)
Q Consensus       183 ~g~~vlV~Ga-g~vG~~a~~la~~~g~~vi~~~~~~~~~~~~~~~~g-----~~---~vv~~~~~~~~~~~-------~~  246 (361)
                      .++++||.|+ |++|..+++.+...|++|++++++.++...+.+++.     ..   ...|..+++.+.++       .+
T Consensus         6 ~~k~vlVTGas~gIG~~ia~~l~~~G~~V~~~~r~~~~~~~~~~~l~~~~~~~~~~~~~~D~~~~~~v~~~~~~~~~~~g   85 (267)
T 2gdz_A            6 NGKVALVTGAAQGIGRAFAEALLLKGAKVALVDWNLEAGVQCKAALHEQFEPQKTLFIQCDVADQQQLRDTFRKVVDHFG   85 (267)
T ss_dssp             TTCEEEEETTTSHHHHHHHHHHHHTTCEEEEEESCHHHHHHHHHHHTTTSCGGGEEEEECCTTSHHHHHHHHHHHHHHHS
T ss_pred             CCCEEEEECCCCcHHHHHHHHHHHCCCEEEEEECCHHHHHHHHHHHHhhcCCCceEEEecCCCCHHHHHHHHHHHHHHcC
Confidence            4678999998 999999999999999999999998776655444432     11   12355555444332       24


Q ss_pred             CccEEEEcCCCcc-----------------cHHHHHhcccc-----CCEEEEecCC
Q 018067          247 TMDGIIDTVSAVH-----------------PLMPLIGLLKS-----QGKLVLVGAP  280 (361)
Q Consensus       247 g~d~vid~~g~~~-----------------~~~~~~~~l~~-----~G~~v~~g~~  280 (361)
                      ++|++|+++|...                 ....++..++.     .|+++.+++.
T Consensus        86 ~id~lv~~Ag~~~~~~~~~~~~~n~~~~~~~~~~~~~~~~~~~~~~~g~iv~isS~  141 (267)
T 2gdz_A           86 RLDILVNNAGVNNEKNWEKTLQINLVSVISGTYLGLDYMSKQNGGEGGIIINMSSL  141 (267)
T ss_dssp             CCCEEEECCCCCCSSSHHHHHHHHTHHHHHHHHHHHHHHCGGGTCCCEEEEEECCG
T ss_pred             CCCEEEECCCCCChhhHHHHHhHHHHHHHHHHHHHHHHHHhccCCCCCEEEEeCCc
Confidence            7999999998521                 11233444433     5899999864

>1i9g_A Hypothetical protein RV2118C; mtase, adoMet, crystal, structural genomics, protein structure initiative; HET: SAM; 1.98A {Mycobacterium tuberculosis} SCOP: c.66.1.13

Probab=97.49  E-value=0.00031  Score=62.03  Aligned_cols=99  Identities=23%  Similarity=0.252  Sum_probs=67.4

Q ss_pred             CCCCCCCEEEEEcCChHHHHHHHHHHHc--CCeEEEEeCCchhHHHHHHHc----C--C-CEEecCCCHHHHHHh-cCCc
Q 018067          179 GLDKPGMHVGVVGLGGLGHVAVKFAKAM--GVKVTVISTSPSKKSEAIERL----G--A-DSFLVSRDQDEMQAA-MGTM  248 (361)
Q Consensus       179 ~~~~~g~~vlV~Gag~vG~~a~~la~~~--g~~vi~~~~~~~~~~~~~~~~----g--~-~~vv~~~~~~~~~~~-~~g~  248 (361)
                      ..++++++||-+|+| .|..+..+++..  +.+++.++.+++....+.+.+    |  . ...+...+.... .. .+.+
T Consensus        95 ~~~~~~~~vLdiG~G-~G~~~~~l~~~~~~~~~v~~vD~~~~~~~~a~~~~~~~~g~~~~~v~~~~~d~~~~-~~~~~~~  172 (280)
T 1i9g_A           95 GDIFPGARVLEAGAG-SGALTLSLLRAVGPAGQVISYEQRADHAEHARRNVSGCYGQPPDNWRLVVSDLADS-ELPDGSV  172 (280)
T ss_dssp             TTCCTTCEEEEECCT-TSHHHHHHHHHHCTTSEEEEECSCHHHHHHHHHHHHHHHTSCCTTEEEECSCGGGC-CCCTTCE
T ss_pred             cCCCCCCEEEEEccc-ccHHHHHHHHHhCCCCEEEEEeCCHHHHHHHHHHHHHhcCCCCCcEEEEECchHhc-CCCCCce
Confidence            447899999999998 688888999875  569999998877655443322    4  2 211222221111 11 2469


Q ss_pred             cEEEEcCCCc-ccHHHHHhccccCCEEEEecC
Q 018067          249 DGIIDTVSAV-HPLMPLIGLLKSQGKLVLVGA  279 (361)
Q Consensus       249 d~vid~~g~~-~~~~~~~~~l~~~G~~v~~g~  279 (361)
                      |+|+.....+ ..+..+.+.|+++|+++.+..
T Consensus       173 D~v~~~~~~~~~~l~~~~~~L~pgG~l~~~~~  204 (280)
T 1i9g_A          173 DRAVLDMLAPWEVLDAVSRLLVAGGVLMVYVA  204 (280)
T ss_dssp             EEEEEESSCGGGGHHHHHHHEEEEEEEEEEES
T ss_pred             eEEEECCcCHHHHHHHHHHhCCCCCEEEEEeC
Confidence            9998766654 567889999999999988743

>1wma_A Carbonyl reductase [NADPH] 1; oxidoreductase; HET: AB3 NDP PE5 P33; 1.24A {Homo sapiens} SCOP: c.2.1.2 PDB: 3bhi_A* 3bhj_A* 3bhm_A* 2pfg_A* 1n5d_A* 2hrb_A*

Probab=97.48  E-value=0.00063  Score=59.64  Aligned_cols=98  Identities=21%  Similarity=0.261  Sum_probs=66.8

Q ss_pred             CCCEEEEEcC-ChHHHHHHHHHHH-cCCeEEEEeCCchhHHHHHHHc---CCC---EEecCCCHHHHHHhc-------CC
Q 018067          183 PGMHVGVVGL-GGLGHVAVKFAKA-MGVKVTVISTSPSKKSEAIERL---GAD---SFLVSRDQDEMQAAM-------GT  247 (361)
Q Consensus       183 ~g~~vlV~Ga-g~vG~~a~~la~~-~g~~vi~~~~~~~~~~~~~~~~---g~~---~vv~~~~~~~~~~~~-------~g  247 (361)
                      .++++||.|+ |.+|..++..+.. .|++|++++++.++...+.+++   +..   ...|-.+.+.+..+.       ++
T Consensus         3 ~~k~vlITGasggIG~~~a~~L~~~~g~~V~~~~r~~~~~~~~~~~l~~~~~~~~~~~~Dl~~~~~~~~~~~~~~~~~g~   82 (276)
T 1wma_A            3 GIHVALVTGGNKGIGLAIVRDLCRLFSGDVVLTARDVTRGQAAVQQLQAEGLSPRFHQLDIDDLQSIRALRDFLRKEYGG   82 (276)
T ss_dssp             CCCEEEESSCSSHHHHHHHHHHHHHSSSEEEEEESSHHHHHHHHHHHHHTTCCCEEEECCTTCHHHHHHHHHHHHHHHSS
T ss_pred             CCCEEEEeCCCcHHHHHHHHHHHHhcCCeEEEEeCChHHHHHHHHHHHhcCCeeEEEECCCCCHHHHHHHHHHHHHhcCC
Confidence            5688999997 9999999998888 8999999999877655554443   322   123555554444332       47


Q ss_pred             ccEEEEcCCCcc-------------------------cHHHHHhccccCCEEEEecCC
Q 018067          248 MDGIIDTVSAVH-------------------------PLMPLIGLLKSQGKLVLVGAP  280 (361)
Q Consensus       248 ~d~vid~~g~~~-------------------------~~~~~~~~l~~~G~~v~~g~~  280 (361)
                      +|++|+++|...                         .++.++..+++.|+++.++..
T Consensus        83 id~li~~Ag~~~~~~~~~~~~~~~~~~~~~N~~g~~~l~~~~~~~~~~~g~iv~~sS~  140 (276)
T 1wma_A           83 LDVLVNNAGIAFKVADPTPFHIQAEVTMKTNFFGTRDVCTELLPLIKPQGRVVNVSSI  140 (276)
T ss_dssp             EEEEEECCCCCCCTTCCSCHHHHHHHHHHHHTHHHHHHHHHHGGGEEEEEEEEEECCH
T ss_pred             CCEEEECCcccccCCCccccHHHHHhhhheeeeeHHHHHHHHHHhhCCCCEEEEECCh
Confidence            999999998421                         112234445557899999763

>1spx_A Short-chain reductase family member (5L265); parallel beta-sheet of seven strands in the order 3214567; 2.10A {Caenorhabditis elegans} SCOP: c.2.1.2

Probab=97.48  E-value=0.00093  Score=58.95  Aligned_cols=75  Identities=16%  Similarity=0.290  Sum_probs=55.1

Q ss_pred             CCCEEEEEcC-ChHHHHHHHHHHHcCCeEEEEeCCchhHHHHHHHc---C---CC---EEecCCCHHHHHHhc-------
Q 018067          183 PGMHVGVVGL-GGLGHVAVKFAKAMGVKVTVISTSPSKKSEAIERL---G---AD---SFLVSRDQDEMQAAM-------  245 (361)
Q Consensus       183 ~g~~vlV~Ga-g~vG~~a~~la~~~g~~vi~~~~~~~~~~~~~~~~---g---~~---~vv~~~~~~~~~~~~-------  245 (361)
                      .++++||.|+ |++|..++..+...|++|++++++.++...+.+++   .   ..   ...|..+++.+.++.       
T Consensus         5 ~~k~vlVTGas~gIG~~ia~~l~~~G~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~~~D~~~~~~~~~~~~~~~~~~   84 (278)
T 1spx_A            5 AEKVAIITGSSNGIGRATAVLFAREGAKVTITGRHAERLEETRQQILAAGVSEQNVNSVVADVTTDAGQDEILSTTLGKF   84 (278)
T ss_dssp             TTCEEEETTTTSHHHHHHHHHHHHTTCEEEEEESCHHHHHHHHHHHHHTTCCGGGEEEEECCTTSHHHHHHHHHHHHHHH
T ss_pred             CCCEEEEeCCCchHHHHHHHHHHHCCCEEEEEeCCHHHHHHHHHHHHhcccCCCceeEEecccCCHHHHHHHHHHHHHHc
Confidence            4678999997 99999999999999999999999987776665554   2   11   123555555444332       


Q ss_pred             CCccEEEEcCCC
Q 018067          246 GTMDGIIDTVSA  257 (361)
Q Consensus       246 ~g~d~vid~~g~  257 (361)
                      +++|++|+++|.
T Consensus        85 g~id~lv~~Ag~   96 (278)
T 1spx_A           85 GKLDILVNNAGA   96 (278)
T ss_dssp             SCCCEEEECCC-
T ss_pred             CCCCEEEECCCC
Confidence            489999999985

>1geg_A Acetoin reductase; SDR family, oxidoreductase; HET: GLC NAD; 1.70A {Klebsiella pneumoniae} SCOP: c.2.1.2

Probab=97.47  E-value=0.00094  Score=58.19  Aligned_cols=74  Identities=19%  Similarity=0.270  Sum_probs=54.2

Q ss_pred             CCEEEEEcC-ChHHHHHHHHHHHcCCeEEEEeCCchhHHHHHHHc---CCCE---EecCCCHHHHHHh-------cCCcc
Q 018067          184 GMHVGVVGL-GGLGHVAVKFAKAMGVKVTVISTSPSKKSEAIERL---GADS---FLVSRDQDEMQAA-------MGTMD  249 (361)
Q Consensus       184 g~~vlV~Ga-g~vG~~a~~la~~~g~~vi~~~~~~~~~~~~~~~~---g~~~---vv~~~~~~~~~~~-------~~g~d  249 (361)
                      ++++||.|+ |++|..+++.+...|++|++++++.++...+.+++   +...   ..|..+++.+.++       .+++|
T Consensus         2 ~k~vlVTGas~gIG~~ia~~l~~~G~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~D~~~~~~v~~~~~~~~~~~g~id   81 (256)
T 1geg_A            2 KKVALVTGAGQGIGKAIALRLVKDGFAVAIADYNDATAKAVASEINQAGGHAVAVKVDVSDRDQVFAAVEQARKTLGGFD   81 (256)
T ss_dssp             CCEEEEETTTSHHHHHHHHHHHHTTCEEEEEESCHHHHHHHHHHHHHTTCCEEEEECCTTSHHHHHHHHHHHHHHTTCCC
T ss_pred             CCEEEEECCCChHHHHHHHHHHHCCCEEEEEeCCHHHHHHHHHHHHhcCCcEEEEEecCCCHHHHHHHHHHHHHHhCCCC
Confidence            568999997 99999999999999999999999887665554433   4321   2355555444332       24799


Q ss_pred             EEEEcCCC
Q 018067          250 GIIDTVSA  257 (361)
Q Consensus       250 ~vid~~g~  257 (361)
                      ++|+++|.
T Consensus        82 ~lv~nAg~   89 (256)
T 1geg_A           82 VIVNNAGV   89 (256)
T ss_dssp             EEEECCCC
T ss_pred             EEEECCCC
Confidence            99999984

>1hxh_A 3BETA/17BETA-hydroxysteroid dehydrogenase; alpha-beta, rossmann fold, short-chain dehydrogenase, oxidoreductase; 1.22A {Comamonas testosteroni} SCOP: c.2.1.2

Probab=97.47  E-value=0.001  Score=57.82  Aligned_cols=75  Identities=20%  Similarity=0.289  Sum_probs=56.7

Q ss_pred             CCCEEEEEcC-ChHHHHHHHHHHHcCCeEEEEeCCchhHHHHHHHcCCCEE---ecCCCHHHHHHh-------cCCccEE
Q 018067          183 PGMHVGVVGL-GGLGHVAVKFAKAMGVKVTVISTSPSKKSEAIERLGADSF---LVSRDQDEMQAA-------MGTMDGI  251 (361)
Q Consensus       183 ~g~~vlV~Ga-g~vG~~a~~la~~~g~~vi~~~~~~~~~~~~~~~~g~~~v---v~~~~~~~~~~~-------~~g~d~v  251 (361)
                      .++++||.|+ |++|..+++.+...|++|++++++.++..++.++++....   .|..+++.+.++       .+++|++
T Consensus         5 ~~k~vlVTGas~giG~~ia~~l~~~G~~V~~~~r~~~~~~~~~~~~~~~~~~~~~D~~~~~~v~~~~~~~~~~~g~id~l   84 (253)
T 1hxh_A            5 QGKVALVTGGASGVGLEVVKLLLGEGAKVAFSDINEAAGQQLAAELGERSMFVRHDVSSEADWTLVMAAVQRRLGTLNVL   84 (253)
T ss_dssp             TTCEEEETTTTSHHHHHHHHHHHHTTCEEEEECSCHHHHHHHHHHHCTTEEEECCCTTCHHHHHHHHHHHHHHHCSCCEE
T ss_pred             CCCEEEEeCCCcHHHHHHHHHHHHCCCEEEEEeCCHHHHHHHHHHcCCceEEEEccCCCHHHHHHHHHHHHHHcCCCCEE
Confidence            4678999997 9999999999999999999999998877777666654321   244555443332       2478999


Q ss_pred             EEcCCC
Q 018067          252 IDTVSA  257 (361)
Q Consensus       252 id~~g~  257 (361)
                      |+++|.
T Consensus        85 v~~Ag~   90 (253)
T 1hxh_A           85 VNNAGI   90 (253)
T ss_dssp             EECCCC
T ss_pred             EECCCC
Confidence            999985

>3rwb_A TPLDH, pyridoxal 4-dehydrogenase; short chain dehydrogenase/reductase, 4-pyridoxola NAD+, oxidoreductase; HET: NAD 4PL; 1.70A {Mesorhizobium loti} PDB: 3ndr_A* 3nug_A*

Probab=97.47  E-value=0.00073  Score=58.63  Aligned_cols=75  Identities=21%  Similarity=0.266  Sum_probs=58.8

Q ss_pred             CCCEEEEEcC-ChHHHHHHHHHHHcCCeEEEEeCCchhHHHHHHHcCCCEE---ecCCCHHHHHHh-------cCCccEE
Q 018067          183 PGMHVGVVGL-GGLGHVAVKFAKAMGVKVTVISTSPSKKSEAIERLGADSF---LVSRDQDEMQAA-------MGTMDGI  251 (361)
Q Consensus       183 ~g~~vlV~Ga-g~vG~~a~~la~~~g~~vi~~~~~~~~~~~~~~~~g~~~v---v~~~~~~~~~~~-------~~g~d~v  251 (361)
                      .|+++||.|+ |++|.++++.+...|++|++++++.++..++.++++....   .|-.+++.+.++       .+++|++
T Consensus         5 ~gk~vlVTGas~gIG~a~a~~l~~~G~~V~~~~r~~~~~~~~~~~~~~~~~~~~~Dv~~~~~v~~~~~~~~~~~g~id~l   84 (247)
T 3rwb_A            5 AGKTALVTGAAQGIGKAIAARLAADGATVIVSDINAEGAKAAAASIGKKARAIAADISDPGSVKALFAEIQALTGGIDIL   84 (247)
T ss_dssp             TTCEEEEETTTSHHHHHHHHHHHHTTCEEEEECSCHHHHHHHHHHHCTTEEECCCCTTCHHHHHHHHHHHHHHHSCCSEE
T ss_pred             CCCEEEEECCCCHHHHHHHHHHHHCCCEEEEEeCCHHHHHHHHHHhCCceEEEEcCCCCHHHHHHHHHHHHHHCCCCCEE
Confidence            5789999997 9999999999999999999999999888888777775432   244454433332       2489999


Q ss_pred             EEcCCC
Q 018067          252 IDTVSA  257 (361)
Q Consensus       252 id~~g~  257 (361)
                      |+++|.
T Consensus        85 v~nAg~   90 (247)
T 3rwb_A           85 VNNASI   90 (247)
T ss_dssp             EECCCC
T ss_pred             EECCCC
Confidence            999985

>2b25_A Hypothetical protein; structural genomics, methyl transferase, SAM, structural GEN consortium, SGC, transferase; HET: SAM; 2.50A {Homo sapiens} SCOP: c.66.1.13

Probab=97.47  E-value=0.00032  Score=63.93  Aligned_cols=99  Identities=18%  Similarity=0.157  Sum_probs=63.2

Q ss_pred             CCCCCCEEEEEcCChHHHHHHHHHHHcC--CeEEEEeCCchhHHHHHHHc---C------------CC-EEecCCCHHHH
Q 018067          180 LDKPGMHVGVVGLGGLGHVAVKFAKAMG--VKVTVISTSPSKKSEAIERL---G------------AD-SFLVSRDQDEM  241 (361)
Q Consensus       180 ~~~~g~~vlV~Gag~vG~~a~~la~~~g--~~vi~~~~~~~~~~~~~~~~---g------------~~-~vv~~~~~~~~  241 (361)
                      .+++|++||-+|+|. |..++.+++..|  .+|+.++.+++....+.+.+   +            .. .++..+-.+..
T Consensus       102 ~~~~g~~VLDiG~G~-G~~~~~la~~~g~~~~v~~vD~~~~~~~~a~~~~~~~~~~~~ln~~~~~~~~v~~~~~d~~~~~  180 (336)
T 2b25_A          102 DINPGDTVLEAGSGS-GGMSLFLSKAVGSQGRVISFEVRKDHHDLAKKNYKHWRDSWKLSHVEEWPDNVDFIHKDISGAT  180 (336)
T ss_dssp             TCCTTCEEEEECCTT-SHHHHHHHHHHCTTCEEEEEESSHHHHHHHHHHHHHHHHHHTTTCSSCCCCCEEEEESCTTCCC
T ss_pred             CCCCCCEEEEeCCCc-CHHHHHHHHHhCCCceEEEEeCCHHHHHHHHHHHHHhhcccccccccccCCceEEEECChHHcc
Confidence            478999999999977 888888888876  68999998886654443321   1            11 12111111111


Q ss_pred             HHhc-CCccEEEEcCCCc-ccHHHHHhccccCCEEEEecC
Q 018067          242 QAAM-GTMDGIIDTVSAV-HPLMPLIGLLKSQGKLVLVGA  279 (361)
Q Consensus       242 ~~~~-~g~d~vid~~g~~-~~~~~~~~~l~~~G~~v~~g~  279 (361)
                      ..+. +.+|+|+-....+ ..+..+.+.|+++|+++.+..
T Consensus       181 ~~~~~~~fD~V~~~~~~~~~~l~~~~~~LkpgG~lv~~~~  220 (336)
T 2b25_A          181 EDIKSLTFDAVALDMLNPHVTLPVFYPHLKHGGVCAVYVV  220 (336)
T ss_dssp             -------EEEEEECSSSTTTTHHHHGGGEEEEEEEEEEES
T ss_pred             cccCCCCeeEEEECCCCHHHHHHHHHHhcCCCcEEEEEeC
Confidence            1122 3699998655544 347889999999999997654

>1zem_A Xylitol dehydrogenase; rossmann fold, dinucleotide-binding domain, oxidoreductase; HET: NAD; 1.90A {Gluconobacter oxydans} SCOP: c.2.1.2

Probab=97.47  E-value=0.001  Score=58.13  Aligned_cols=75  Identities=13%  Similarity=0.240  Sum_probs=55.4

Q ss_pred             CCCEEEEEcC-ChHHHHHHHHHHHcCCeEEEEeCCchhHHHHHHHc---CCCE---EecCCCHHHHHHh-------cCCc
Q 018067          183 PGMHVGVVGL-GGLGHVAVKFAKAMGVKVTVISTSPSKKSEAIERL---GADS---FLVSRDQDEMQAA-------MGTM  248 (361)
Q Consensus       183 ~g~~vlV~Ga-g~vG~~a~~la~~~g~~vi~~~~~~~~~~~~~~~~---g~~~---vv~~~~~~~~~~~-------~~g~  248 (361)
                      .++++||.|+ |++|.++++.+...|++|++++++.++...+.+++   |...   ..|..+++.+..+       .+++
T Consensus         6 ~~k~vlVTGas~gIG~~ia~~l~~~G~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~D~~~~~~~~~~~~~~~~~~g~i   85 (262)
T 1zem_A            6 NGKVCLVTGAGGNIGLATALRLAEEGTAIALLDMNREALEKAEASVREKGVEARSYVCDVTSEEAVIGTVDSVVRDFGKI   85 (262)
T ss_dssp             TTCEEEEETTTSHHHHHHHHHHHHTTCEEEEEESCHHHHHHHHHHHHTTTSCEEEEECCTTCHHHHHHHHHHHHHHHSCC
T ss_pred             CCCEEEEeCCCcHHHHHHHHHHHHCCCEEEEEeCCHHHHHHHHHHHHhcCCcEEEEEecCCCHHHHHHHHHHHHHHhCCC
Confidence            5788999997 99999999999999999999999887766554443   4332   2355555443322       2479


Q ss_pred             cEEEEcCCC
Q 018067          249 DGIIDTVSA  257 (361)
Q Consensus       249 d~vid~~g~  257 (361)
                      |++|+++|.
T Consensus        86 d~lv~nAg~   94 (262)
T 1zem_A           86 DFLFNNAGY   94 (262)
T ss_dssp             CEEEECCCC
T ss_pred             CEEEECCCC
Confidence            999999984

>1x1t_A D(-)-3-hydroxybutyrate dehydrogenase; NAD, NADH, SDR, short chain dehydrogenase, ketone BODY, beta hydroxybutyrate, oxidoreductase; HET: NAD; 1.52A {Pseudomonas fragi} SCOP: c.2.1.2 PDB: 1wmb_A* 2ztl_A* 2ztv_A* 2ztm_A* 2ztu_A* 2yz7_A 2zea_A* 3eew_A* 3vdq_A* 3vdr_A*

Probab=97.46  E-value=0.00077  Score=58.89  Aligned_cols=75  Identities=16%  Similarity=0.230  Sum_probs=54.1

Q ss_pred             CCCEEEEEcC-ChHHHHHHHHHHHcCCeEEEEeCCchh-HHHHHHHc----CCCEE---ecCCCHHHHHHh-------cC
Q 018067          183 PGMHVGVVGL-GGLGHVAVKFAKAMGVKVTVISTSPSK-KSEAIERL----GADSF---LVSRDQDEMQAA-------MG  246 (361)
Q Consensus       183 ~g~~vlV~Ga-g~vG~~a~~la~~~g~~vi~~~~~~~~-~~~~~~~~----g~~~v---v~~~~~~~~~~~-------~~  246 (361)
                      .++++||.|+ |++|..+++.+...|++|++++++.++ ...+.+++    +....   .|..+++.+.++       .+
T Consensus         3 ~~k~vlVTGas~gIG~~ia~~l~~~G~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~~D~~~~~~v~~~~~~~~~~~g   82 (260)
T 1x1t_A            3 KGKVAVVTGSTSGIGLGIATALAAQGADIVLNGFGDAAEIEKVRAGLAAQHGVKVLYDGADLSKGEAVRGLVDNAVRQMG   82 (260)
T ss_dssp             TTCEEEETTCSSHHHHHHHHHHHHTTCEEEEECCSCHHHHHHHHHHHHHHHTSCEEEECCCTTSHHHHHHHHHHHHHHHS
T ss_pred             CCCEEEEeCCCcHHHHHHHHHHHHcCCEEEEEeCCcchHHHHHHHHHHhccCCcEEEEECCCCCHHHHHHHHHHHHHhcC
Confidence            4678999987 999999999999999999999988776 55544433    43321   245555444332       24


Q ss_pred             CccEEEEcCCC
Q 018067          247 TMDGIIDTVSA  257 (361)
Q Consensus       247 g~d~vid~~g~  257 (361)
                      ++|++|+++|.
T Consensus        83 ~iD~lv~~Ag~   93 (260)
T 1x1t_A           83 RIDILVNNAGI   93 (260)
T ss_dssp             CCSEEEECCCC
T ss_pred             CCCEEEECCCC
Confidence            79999999984

>3d3w_A L-xylulose reductase; uronate cycle, short-chain dehydrogenase/reductase(SDR) superfamily, glucose metabolism, acetylation, carbohydrate metabolism; HET: NAP; 1.87A {Homo sapiens} PDB: 1wnt_A* 1pr9_A*

Probab=97.46  E-value=0.00098  Score=57.45  Aligned_cols=75  Identities=20%  Similarity=0.337  Sum_probs=57.6

Q ss_pred             CCCEEEEEcC-ChHHHHHHHHHHHcCCeEEEEeCCchhHHHHHHHcC-CCE-EecCCCHHHHHHhc---CCccEEEEcCC
Q 018067          183 PGMHVGVVGL-GGLGHVAVKFAKAMGVKVTVISTSPSKKSEAIERLG-ADS-FLVSRDQDEMQAAM---GTMDGIIDTVS  256 (361)
Q Consensus       183 ~g~~vlV~Ga-g~vG~~a~~la~~~g~~vi~~~~~~~~~~~~~~~~g-~~~-vv~~~~~~~~~~~~---~g~d~vid~~g  256 (361)
                      +++++||.|+ |.+|..+++.+...|++|++++++.++...+.+++. ... ..|..+++.+.++.   +++|++|+++|
T Consensus         6 ~~k~vlITGasggiG~~~a~~l~~~G~~V~~~~r~~~~~~~~~~~~~~~~~~~~D~~~~~~~~~~~~~~~~id~vi~~Ag   85 (244)
T 3d3w_A            6 AGRRVLVTGAGKGIGRGTVQALHATGARVVAVSRTQADLDSLVRECPGIEPVCVDLGDWEATERALGSVGPVDLLVNNAA   85 (244)
T ss_dssp             TTCEEEEESTTSHHHHHHHHHHHHTTCEEEEEESCHHHHHHHHHHSTTCEEEECCTTCHHHHHHHHTTCCCCCEEEECCC
T ss_pred             CCcEEEEECCCcHHHHHHHHHHHHCCCEEEEEeCCHHHHHHHHHHcCCCCEEEEeCCCHHHHHHHHHHcCCCCEEEECCc
Confidence            5788999998 999999999999999999999998877766655553 222 23556666655543   36899999998


Q ss_pred             C
Q 018067          257 A  257 (361)
Q Consensus       257 ~  257 (361)
                      .
T Consensus        86 ~   86 (244)
T 3d3w_A           86 V   86 (244)
T ss_dssp             C
T ss_pred             c
Confidence            4

>1lu9_A Methylene tetrahydromethanopterin dehydrogenase; alpha/beta twisted open sheet structure, oxidoreductase; 1.90A {Methylobacterium extorquens} SCOP: c.2.1.7 c.58.1.4 PDB: 1lua_A*

Probab=97.45  E-value=0.00085  Score=59.68  Aligned_cols=98  Identities=12%  Similarity=0.038  Sum_probs=68.4

Q ss_pred             CCCCEEEEEc-CChHHHHHHHHHHHcCCeEEEEeCCchhHHHHHHHc----CCC-EEecCCCHHHHHHhcCCccEEEEcC
Q 018067          182 KPGMHVGVVG-LGGLGHVAVKFAKAMGVKVTVISTSPSKKSEAIERL----GAD-SFLVSRDQDEMQAAMGTMDGIIDTV  255 (361)
Q Consensus       182 ~~g~~vlV~G-ag~vG~~a~~la~~~g~~vi~~~~~~~~~~~~~~~~----g~~-~vv~~~~~~~~~~~~~g~d~vid~~  255 (361)
                      -+|+++||+| +|++|.+++..+...|++|++++++.++..++++++    +.. ...|..+.+.+.+....+|++|+++
T Consensus       117 l~gk~vlVtGaaGGiG~aia~~L~~~G~~V~i~~R~~~~~~~l~~~~~~~~~~~~~~~D~~~~~~~~~~~~~~DvlVn~a  196 (287)
T 1lu9_A          117 VKGKKAVVLAGTGPVGMRSAALLAGEGAEVVLCGRKLDKAQAAADSVNKRFKVNVTAAETADDASRAEAVKGAHFVFTAG  196 (287)
T ss_dssp             CTTCEEEEETCSSHHHHHHHHHHHHTTCEEEEEESSHHHHHHHHHHHHHHHTCCCEEEECCSHHHHHHHTTTCSEEEECC
T ss_pred             CCCCEEEEECCCcHHHHHHHHHHHHCcCEEEEEECCHHHHHHHHHHHHhcCCcEEEEecCCCHHHHHHHHHhCCEEEECC
Confidence            4688999999 599999999999999999999999887776665544    322 2346666666777777899999999


Q ss_pred             CCcc--cHHHHHhccccCCEEEEecC
Q 018067          256 SAVH--PLMPLIGLLKSQGKLVLVGA  279 (361)
Q Consensus       256 g~~~--~~~~~~~~l~~~G~~v~~g~  279 (361)
                      |...  ....-+..+...-.+..+-.
T Consensus       197 g~g~~~~~~~~~~~~~~~~~~~dvn~  222 (287)
T 1lu9_A          197 AIGLELLPQAAWQNESSIEIVADYNA  222 (287)
T ss_dssp             CTTCCSBCHHHHTTCTTCCEEEECCC
T ss_pred             CccccCCChhHcCchHHHHHHHHhhh
Confidence            7421  11112333455555555543

>3oig_A Enoyl-[acyl-carrier-protein] reductase [NADH]; fatty acid synthesis, rossmann-like fold, enoyl-ACP reductas binding; HET: NAD IMJ; 1.25A {Bacillus subtilis} SCOP: c.2.1.2 PDB: 3oif_A* 2qio_A* 3oje_A 3ojf_A*

Probab=97.45  E-value=0.0014  Score=57.31  Aligned_cols=98  Identities=13%  Similarity=0.213  Sum_probs=65.9

Q ss_pred             CCCEEEEEcC-Ch--HHHHHHHHHHHcCCeEEEEeCCchhH---HHHHHHcCC-C---EEecCCCHHHHHHh-------c
Q 018067          183 PGMHVGVVGL-GG--LGHVAVKFAKAMGVKVTVISTSPSKK---SEAIERLGA-D---SFLVSRDQDEMQAA-------M  245 (361)
Q Consensus       183 ~g~~vlV~Ga-g~--vG~~a~~la~~~g~~vi~~~~~~~~~---~~~~~~~g~-~---~vv~~~~~~~~~~~-------~  245 (361)
                      .|+++||.|+ |.  +|..+++.+...|++|++++++++..   .++.++++. .   ...|..+++.+.++       .
T Consensus         6 ~~k~vlVTGasg~~GIG~~ia~~l~~~G~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~D~~~~~~v~~~~~~~~~~~   85 (266)
T 3oig_A            6 EGRNIVVMGVANKRSIAWGIARSLHEAGARLIFTYAGERLEKSVHELAGTLDRNDSIILPCDVTNDAEIETCFASIKEQV   85 (266)
T ss_dssp             TTCEEEEECCCSTTSHHHHHHHHHHHTTCEEEEEESSGGGHHHHHHHHHTSSSCCCEEEECCCSSSHHHHHHHHHHHHHH
T ss_pred             CCCEEEEEcCCCCCcHHHHHHHHHHHCCCEEEEecCchHHHHHHHHHHHhcCCCCceEEeCCCCCHHHHHHHHHHHHHHh
Confidence            5789999987 66  99999999999999999998876433   333333333 1   12344554433332       2


Q ss_pred             CCccEEEEcCCCcc-----------------------------cHHHHHhccccCCEEEEecCC
Q 018067          246 GTMDGIIDTVSAVH-----------------------------PLMPLIGLLKSQGKLVLVGAP  280 (361)
Q Consensus       246 ~g~d~vid~~g~~~-----------------------------~~~~~~~~l~~~G~~v~~g~~  280 (361)
                      +++|++|+++|...                             ..+.++..++++|+++.+++.
T Consensus        86 g~id~li~~Ag~~~~~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~~~g~iv~isS~  149 (266)
T 3oig_A           86 GVIHGIAHCIAFANKEELVGEYLNTNRDGFLLAHNISSYSLTAVVKAARPMMTEGGSIVTLTYL  149 (266)
T ss_dssp             SCCCEEEECCCCCCGGGGSSCGGGCCHHHHHHHHHHHTHHHHHHHHHHGGGCTTCEEEEEEECG
T ss_pred             CCeeEEEEccccccccccccchhhccHHHHHHHHHHhHHHHHHHHHHHHhhcCCCceEEEEecc
Confidence            47999999988421                             123455566778999999864

>2uvd_A 3-oxoacyl-(acyl-carrier-protein) reductase; beta-ketoacyl- (acyl carrier protein) reductase, short-chain dehydrogenase/reductase (SDR); 2.4A {Bacillus anthracis}

Probab=97.44  E-value=0.001  Score=57.59  Aligned_cols=75  Identities=19%  Similarity=0.319  Sum_probs=53.7

Q ss_pred             CCCEEEEEcC-ChHHHHHHHHHHHcCCeEEEEeC-CchhHHHHHHHc---CCCE---EecCCCHHHHHHh-------cCC
Q 018067          183 PGMHVGVVGL-GGLGHVAVKFAKAMGVKVTVIST-SPSKKSEAIERL---GADS---FLVSRDQDEMQAA-------MGT  247 (361)
Q Consensus       183 ~g~~vlV~Ga-g~vG~~a~~la~~~g~~vi~~~~-~~~~~~~~~~~~---g~~~---vv~~~~~~~~~~~-------~~g  247 (361)
                      .++++||.|+ |++|..+++.+...|++|+++++ +.++..++.+++   +...   ..|..+++.+.++       .++
T Consensus         3 ~~k~vlVTGas~giG~~ia~~l~~~G~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~D~~~~~~~~~~~~~~~~~~g~   82 (246)
T 2uvd_A            3 KGKVALVTGASRGIGRAIAIDLAKQGANVVVNYAGNEQKANEVVDEIKKLGSDAIAVRADVANAEDVTNMVKQTVDVFGQ   82 (246)
T ss_dssp             TTCEEEETTCSSHHHHHHHHHHHHTTCEEEEEESSCHHHHHHHHHHHHHTTCCEEEEECCTTCHHHHHHHHHHHHHHHSC
T ss_pred             CCCEEEEECCCcHHHHHHHHHHHHCCCEEEEEeCCCHHHHHHHHHHHHhcCCcEEEEEcCCCCHHHHHHHHHHHHHHcCC
Confidence            4678999987 99999999999999999999998 665554443333   4332   2355555444332       247


Q ss_pred             ccEEEEcCCC
Q 018067          248 MDGIIDTVSA  257 (361)
Q Consensus       248 ~d~vid~~g~  257 (361)
                      +|++|+++|.
T Consensus        83 id~lv~nAg~   92 (246)
T 2uvd_A           83 VDILVNNAGV   92 (246)
T ss_dssp             CCEEEECCCC
T ss_pred             CCEEEECCCC
Confidence            9999999985

>2bgk_A Rhizome secoisolariciresinol dehydrogenase; oxidoreductase; 1.6A {Podophyllum peltatum} SCOP: c.2.1.2 PDB: 2bgl_A* 2bgm_A*

Probab=97.44  E-value=0.0013  Score=57.82  Aligned_cols=75  Identities=16%  Similarity=0.302  Sum_probs=55.8

Q ss_pred             CCCEEEEEcC-ChHHHHHHHHHHHcCCeEEEEeCCchhHHHHHHHcCC--C---EEecCCCHHHHHHhc-------CCcc
Q 018067          183 PGMHVGVVGL-GGLGHVAVKFAKAMGVKVTVISTSPSKKSEAIERLGA--D---SFLVSRDQDEMQAAM-------GTMD  249 (361)
Q Consensus       183 ~g~~vlV~Ga-g~vG~~a~~la~~~g~~vi~~~~~~~~~~~~~~~~g~--~---~vv~~~~~~~~~~~~-------~g~d  249 (361)
                      .++++||.|+ |.+|..+++.+...|++|++++++.++...+.++++.  .   ...|..+++.+..+.       +++|
T Consensus        15 ~~k~vlITGasggiG~~~a~~l~~~G~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~D~~~~~~~~~~~~~~~~~~~~id   94 (278)
T 2bgk_A           15 QDKVAIITGGAGGIGETTAKLFVRYGAKVVIADIADDHGQKVCNNIGSPDVISFVHCDVTKDEDVRNLVDTTIAKHGKLD   94 (278)
T ss_dssp             TTCEEEEESTTSHHHHHHHHHHHHTTCEEEEEESCHHHHHHHHHHHCCTTTEEEEECCTTCHHHHHHHHHHHHHHHSCCC
T ss_pred             cCCEEEEECCCCHHHHHHHHHHHHCCCEEEEEcCChhHHHHHHHHhCCCCceEEEECCCCCHHHHHHHHHHHHHHcCCCC
Confidence            5788999997 9999999999999999999999987766666555542  1   123555555444332       4799


Q ss_pred             EEEEcCCC
Q 018067          250 GIIDTVSA  257 (361)
Q Consensus       250 ~vid~~g~  257 (361)
                      ++|+++|.
T Consensus        95 ~li~~Ag~  102 (278)
T 2bgk_A           95 IMFGNVGV  102 (278)
T ss_dssp             EEEECCCC
T ss_pred             EEEECCcc
Confidence            99999984

>1hdc_A 3-alpha, 20 beta-hydroxysteroid dehydrogenase; oxidoreductase; HET: CBO; 2.20A {Streptomyces exfoliatus} SCOP: c.2.1.2 PDB: 2hsd_A*

Probab=97.44  E-value=0.0005  Score=59.94  Aligned_cols=75  Identities=24%  Similarity=0.392  Sum_probs=57.4

Q ss_pred             CCCEEEEEcC-ChHHHHHHHHHHHcCCeEEEEeCCchhHHHHHHHcCCCE---EecCCCHHHHHHhc-------CCccEE
Q 018067          183 PGMHVGVVGL-GGLGHVAVKFAKAMGVKVTVISTSPSKKSEAIERLGADS---FLVSRDQDEMQAAM-------GTMDGI  251 (361)
Q Consensus       183 ~g~~vlV~Ga-g~vG~~a~~la~~~g~~vi~~~~~~~~~~~~~~~~g~~~---vv~~~~~~~~~~~~-------~g~d~v  251 (361)
                      .++++||.|+ |++|.++++.+...|++|++++++.++..++.++++...   ..|..+++.+.++.       +++|++
T Consensus         4 ~~k~vlVTGas~gIG~~ia~~l~~~G~~V~~~~r~~~~~~~~~~~~~~~~~~~~~D~~~~~~~~~~~~~~~~~~g~iD~l   83 (254)
T 1hdc_A            4 SGKTVIITGGARGLGAEAARQAVAAGARVVLADVLDEEGAATARELGDAARYQHLDVTIEEDWQRVVAYAREEFGSVDGL   83 (254)
T ss_dssp             CCSEEEEETTTSHHHHHHHHHHHHTTCEEEEEESCHHHHHHHHHTTGGGEEEEECCTTCHHHHHHHHHHHHHHHSCCCEE
T ss_pred             CCCEEEEECCCcHHHHHHHHHHHHCCCEEEEEeCCHHHHHHHHHHhCCceeEEEecCCCHHHHHHHHHHHHHHcCCCCEE
Confidence            4688999998 999999999999999999999999887777766665332   23555555444332       479999


Q ss_pred             EEcCCC
Q 018067          252 IDTVSA  257 (361)
Q Consensus       252 id~~g~  257 (361)
                      |+++|.
T Consensus        84 v~nAg~   89 (254)
T 1hdc_A           84 VNNAGI   89 (254)
T ss_dssp             EECCCC
T ss_pred             EECCCC
Confidence            999984

>3abi_A Putative uncharacterized protein PH1688; L-lysine dehydrogenase, oxidoreductase; HET: NAD; 2.44A {Pyrococcus horikoshii}

Probab=97.43  E-value=0.0012  Score=60.79  Aligned_cols=117  Identities=12%  Similarity=0.055  Sum_probs=80.2

Q ss_pred             CEEEEEcCChHHHHHHHHHHHcCCeEEEEeCCchhHHHHHHHcCCCEEecCCCHHHHHHhcCCccEEEEcCCCcccHHHH
Q 018067          185 MHVGVVGLGGLGHVAVKFAKAMGVKVTVISTSPSKKSEAIERLGADSFLVSRDQDEMQAAMGTMDGIIDTVSAVHPLMPL  264 (361)
Q Consensus       185 ~~vlV~Gag~vG~~a~~la~~~g~~vi~~~~~~~~~~~~~~~~g~~~vv~~~~~~~~~~~~~g~d~vid~~g~~~~~~~~  264 (361)
                      -+|+|+|+|.+|..+++.+.. ..+|.+++++.++.+.+ +++.....+|..+.+.+.++..++|+|+++++.......+
T Consensus        17 mkilvlGaG~vG~~~~~~L~~-~~~v~~~~~~~~~~~~~-~~~~~~~~~d~~d~~~l~~~~~~~DvVi~~~p~~~~~~v~   94 (365)
T 3abi_A           17 MKVLILGAGNIGRAIAWDLKD-EFDVYIGDVNNENLEKV-KEFATPLKVDASNFDKLVEVMKEFELVIGALPGFLGFKSI   94 (365)
T ss_dssp             CEEEEECCSHHHHHHHHHHTT-TSEEEEEESCHHHHHHH-TTTSEEEECCTTCHHHHHHHHTTCSEEEECCCGGGHHHHH
T ss_pred             cEEEEECCCHHHHHHHHHHhc-CCCeEEEEcCHHHHHHH-hccCCcEEEecCCHHHHHHHHhCCCEEEEecCCcccchHH
Confidence            479999999999999988754 46888888887766555 3333233457778888888888999999999876545667


Q ss_pred             HhccccCCEEEEecCCCCCcccChHHHHhCCcEEEeccc
Q 018067          265 IGLLKSQGKLVLVGAPEKPLELPAFSLLMGRKIVGGSMI  303 (361)
Q Consensus       265 ~~~l~~~G~~v~~g~~~~~~~~~~~~~~~~~~~i~g~~~  303 (361)
                      ..+++.+-.++++........---...-.+++.+....+
T Consensus        95 ~~~~~~g~~yvD~s~~~~~~~~l~~~a~~~g~~~i~~~G  133 (365)
T 3abi_A           95 KAAIKSKVDMVDVSFMPENPLELRDEAEKAQVTIVFDAG  133 (365)
T ss_dssp             HHHHHHTCEEEECCCCSSCGGGGHHHHHHTTCEEECCCB
T ss_pred             HHHHhcCcceEeeeccchhhhhhhhhhccCCceeeecCC
Confidence            778888889999865432211111122335566655443

>3l07_A Bifunctional protein fold; structural genomics, IDP01849, methylenetetrahydrofolate dehydrogenase; 1.88A {Francisella tularensis}

Probab=97.43  E-value=0.00068  Score=59.53  Aligned_cols=97  Identities=19%  Similarity=0.225  Sum_probs=75.0

Q ss_pred             cccchhhhhhhhHhhhcCCCCCCCEEEEEcCC-hHHHHHHHHHHHcCCeEEEEeCCchhHHHHHHHcCCCEEecCCCHHH
Q 018067          162 APLLCAGITVYSPLRFYGLDKPGMHVGVVGLG-GLGHVAVKFAKAMGVKVTVISTSPSKKSEAIERLGADSFLVSRDQDE  240 (361)
Q Consensus       162 a~l~~~~~ta~~~l~~~~~~~~g~~vlV~Gag-~vG~~a~~la~~~g~~vi~~~~~~~~~~~~~~~~g~~~vv~~~~~~~  240 (361)
                      ..+||+...+...+++...--.|++++|+|.| .+|..+++++...|++|++..+....                     
T Consensus       139 ~~~PcTp~gv~~lL~~~~i~l~Gk~vvVIG~s~iVG~p~A~lL~~~gAtVtv~hs~t~~---------------------  197 (285)
T 3l07_A          139 CLESCTPKGIMTMLREYGIKTEGAYAVVVGASNVVGKPVSQLLLNAKATVTTCHRFTTD---------------------  197 (285)
T ss_dssp             CCCCHHHHHHHHHHHHTTCCCTTCEEEEECCCTTTHHHHHHHHHHTTCEEEEECTTCSS---------------------
T ss_pred             CCCCCCHHHHHHHHHHhCCCCCCCEEEEECCCchhHHHHHHHHHHCCCeEEEEeCCchh---------------------
Confidence            45677777888888877654689999999985 48999999999999999887654221                     


Q ss_pred             HHHhcCCccEEEEcCCCcccHHHHHhccccCCEEEEecCCC
Q 018067          241 MQAAMGTMDGIIDTVSAVHPLMPLIGLLKSQGKLVLVGAPE  281 (361)
Q Consensus       241 ~~~~~~g~d~vid~~g~~~~~~~~~~~l~~~G~~v~~g~~~  281 (361)
                      +.+....+|++|.++|.+..+  -.+.++++..++++|...
T Consensus       198 L~~~~~~ADIVI~Avg~p~~I--~~~~vk~GavVIDvgi~~  236 (285)
T 3l07_A          198 LKSHTTKADILIVAVGKPNFI--TADMVKEGAVVIDVGINH  236 (285)
T ss_dssp             HHHHHTTCSEEEECCCCTTCB--CGGGSCTTCEEEECCCEE
T ss_pred             HHHhcccCCEEEECCCCCCCC--CHHHcCCCcEEEEecccC
Confidence            234455789999999988643  346779999999998753

>3k31_A Enoyl-(acyl-carrier-protein) reductase; ssgcid, NIH, niaid, SBRI, UW, decode, eonyl-(acyl-carrier-PR reductase, NAD, oxidoreductase; HET: NAD; 1.80A {Anaplasma phagocytophilum} PDB: 3k2e_A*

Probab=97.42  E-value=0.0021  Score=57.40  Aligned_cols=99  Identities=18%  Similarity=0.189  Sum_probs=68.0

Q ss_pred             CCCCEEEEEcC-C--hHHHHHHHHHHHcCCeEEEEeCCchhH---HHHHHHcCCCE--EecCCCHHHHHHh-------cC
Q 018067          182 KPGMHVGVVGL-G--GLGHVAVKFAKAMGVKVTVISTSPSKK---SEAIERLGADS--FLVSRDQDEMQAA-------MG  246 (361)
Q Consensus       182 ~~g~~vlV~Ga-g--~vG~~a~~la~~~g~~vi~~~~~~~~~---~~~~~~~g~~~--vv~~~~~~~~~~~-------~~  246 (361)
                      -.|+++||.|+ |  ++|.++++.+...|++|++++++++..   ..+.+..+...  ..|-.+++.+.++       .+
T Consensus        28 l~~k~vlVTGasg~~GIG~~ia~~la~~G~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~Dv~d~~~v~~~~~~~~~~~g  107 (296)
T 3k31_A           28 MEGKKGVIIGVANDKSLAWGIAKAVCAQGAEVALTYLSETFKKRVDPLAESLGVKLTVPCDVSDAESVDNMFKVLAEEWG  107 (296)
T ss_dssp             TTTCEEEEECCCSTTSHHHHHHHHHHHTTCEEEEEESSGGGHHHHHHHHHHHTCCEEEECCTTCHHHHHHHHHHHHHHHS
T ss_pred             cCCCEEEEEeCCCCCCHHHHHHHHHHHCCCEEEEEeCChHHHHHHHHHHHhcCCeEEEEcCCCCHHHHHHHHHHHHHHcC
Confidence            35789999997 5  999999999999999999999886433   33334445322  2355565544433       25


Q ss_pred             CccEEEEcCCCcc-----------------------------cHHHHHhccccCCEEEEecCC
Q 018067          247 TMDGIIDTVSAVH-----------------------------PLMPLIGLLKSQGKLVLVGAP  280 (361)
Q Consensus       247 g~d~vid~~g~~~-----------------------------~~~~~~~~l~~~G~~v~~g~~  280 (361)
                      ++|++|+++|...                             ..+.++..++++|+++.+++.
T Consensus       108 ~iD~lVnnAG~~~~~~~~~~~~~~~~~~~~~~~~vN~~g~~~l~~~~~~~m~~~g~IV~isS~  170 (296)
T 3k31_A          108 SLDFVVHAVAFSDKNELKGRYVDTSLGNFLTSMHISCYSFTYIASKAEPLMTNGGSILTLSYY  170 (296)
T ss_dssp             CCSEEEECCCCCCHHHHTSCGGGCCHHHHHHHHHHHTHHHHHHHHHHGGGCTTCEEEEEEECG
T ss_pred             CCCEEEECCCcCCcccccCChhhCCHHHHHHHHHHHHHHHHHHHHHHHHHhhcCCEEEEEEeh
Confidence            7999999998531                             122344566678999999764

>3ftp_A 3-oxoacyl-[acyl-carrier protein] reductase; ssgcid, 3-ketoacyl-(acyl-carrier- protein) reductase, oxidoreductase, structural genomics; 2.05A {Burkholderia pseudomallei}

Probab=97.42  E-value=0.00075  Score=59.44  Aligned_cols=75  Identities=16%  Similarity=0.206  Sum_probs=55.4

Q ss_pred             CCCEEEEEcC-ChHHHHHHHHHHHcCCeEEEEeCCchhHHHHHHHc---CCC---EEecCCCHHHHHHh-------cCCc
Q 018067          183 PGMHVGVVGL-GGLGHVAVKFAKAMGVKVTVISTSPSKKSEAIERL---GAD---SFLVSRDQDEMQAA-------MGTM  248 (361)
Q Consensus       183 ~g~~vlV~Ga-g~vG~~a~~la~~~g~~vi~~~~~~~~~~~~~~~~---g~~---~vv~~~~~~~~~~~-------~~g~  248 (361)
                      .++++||.|+ |++|.+++..+...|++|++++++.++..++.+.+   +..   ...|-.+.+.+.++       .+++
T Consensus        27 ~~k~~lVTGas~GIG~aia~~la~~G~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~Dv~d~~~v~~~~~~~~~~~g~i  106 (270)
T 3ftp_A           27 DKQVAIVTGASRGIGRAIALELARRGAMVIGTATTEAGAEGIGAAFKQAGLEGRGAVLNVNDATAVDALVESTLKEFGAL  106 (270)
T ss_dssp             TTCEEEETTCSSHHHHHHHHHHHHTTCEEEEEESSHHHHHHHHHHHHHHTCCCEEEECCTTCHHHHHHHHHHHHHHHSCC
T ss_pred             CCCEEEEECCCCHHHHHHHHHHHHCCCEEEEEeCCHHHHHHHHHHHHhcCCcEEEEEEeCCCHHHHHHHHHHHHHHcCCC
Confidence            5788999987 99999999999999999999999887765554433   332   23355665444332       2479


Q ss_pred             cEEEEcCCC
Q 018067          249 DGIIDTVSA  257 (361)
Q Consensus       249 d~vid~~g~  257 (361)
                      |++|+++|.
T Consensus       107 D~lvnnAg~  115 (270)
T 3ftp_A          107 NVLVNNAGI  115 (270)
T ss_dssp             CEEEECCCC
T ss_pred             CEEEECCCC
Confidence            999999984

>2ehd_A Oxidoreductase, oxidoreductase, short-chain dehydrogenase/reducta; rossman fold, structural genomics, NPPSFA; 2.40A {Thermus thermophilus}

Probab=97.41  E-value=0.0018  Score=55.37  Aligned_cols=75  Identities=16%  Similarity=0.255  Sum_probs=55.7

Q ss_pred             CCCEEEEEcC-ChHHHHHHHHHHHcCCeEEEEeCCchhHHHHHHHcC-CC-EEecCCCHHHHHHh-------cCCccEEE
Q 018067          183 PGMHVGVVGL-GGLGHVAVKFAKAMGVKVTVISTSPSKKSEAIERLG-AD-SFLVSRDQDEMQAA-------MGTMDGII  252 (361)
Q Consensus       183 ~g~~vlV~Ga-g~vG~~a~~la~~~g~~vi~~~~~~~~~~~~~~~~g-~~-~vv~~~~~~~~~~~-------~~g~d~vi  252 (361)
                      .++++||.|+ |.+|..++..+...|++|++++++.++...+.++++ .. ...|..+.+.+.++       .+++|++|
T Consensus         4 ~~k~vlVtGasggiG~~~a~~l~~~G~~V~~~~r~~~~~~~~~~~~~~~~~~~~D~~~~~~~~~~~~~~~~~~~~id~li   83 (234)
T 2ehd_A            4 MKGAVLITGASRGIGEATARLLHAKGYRVGLMARDEKRLQALAAELEGALPLPGDVREEGDWARAVAAMEEAFGELSALV   83 (234)
T ss_dssp             CCCEEEESSTTSHHHHHHHHHHHHTTCEEEEEESCHHHHHHHHHHSTTCEEEECCTTCHHHHHHHHHHHHHHHSCCCEEE
T ss_pred             CCCEEEEECCCcHHHHHHHHHHHHCCCEEEEEECCHHHHHHHHHHhhhceEEEecCCCHHHHHHHHHHHHHHcCCCCEEE
Confidence            3568999987 999999999999999999999998877776666554 22 12355555443332       24799999


Q ss_pred             EcCCC
Q 018067          253 DTVSA  257 (361)
Q Consensus       253 d~~g~  257 (361)
                      +++|.
T Consensus        84 ~~Ag~   88 (234)
T 2ehd_A           84 NNAGV   88 (234)
T ss_dssp             ECCCC
T ss_pred             ECCCc
Confidence            99984

>3pxx_A Carveol dehydrogenase; structural genomics, seattle structural genomics center for infectious disease, ssgcid, NAD, tuberculosis; HET: NAD; 2.00A {Mycobacterium avium} SCOP: c.2.1.0

Probab=97.41  E-value=0.0011  Score=58.60  Aligned_cols=99  Identities=17%  Similarity=0.225  Sum_probs=67.4

Q ss_pred             CCCCEEEEEcC-ChHHHHHHHHHHHcCCeEEEEeCC------------chhHHHHH---HHcCCCE---EecCCCHHHHH
Q 018067          182 KPGMHVGVVGL-GGLGHVAVKFAKAMGVKVTVISTS------------PSKKSEAI---ERLGADS---FLVSRDQDEMQ  242 (361)
Q Consensus       182 ~~g~~vlV~Ga-g~vG~~a~~la~~~g~~vi~~~~~------------~~~~~~~~---~~~g~~~---vv~~~~~~~~~  242 (361)
                      -.|+++||.|+ |++|..+++.+...|++|++++++            .++.....   +..+...   ..|..+++.+.
T Consensus         8 l~gk~vlVTGas~gIG~~ia~~l~~~G~~V~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~D~~~~~~v~   87 (287)
T 3pxx_A            8 VQDKVVLVTGGARGQGRSHAVKLAEEGADIILFDICHDIETNEYPLATSRDLEEAGLEVEKTGRKAYTAEVDVRDRAAVS   87 (287)
T ss_dssp             TTTCEEEEETTTSHHHHHHHHHHHHTTCEEEEEECCSCCTTSCSCCCCHHHHHHHHHHHHHTTSCEEEEECCTTCHHHHH
T ss_pred             cCCCEEEEeCCCChHHHHHHHHHHHCCCeEEEEcccccccccccchhhhHHHHHHHHHHHhcCCceEEEEccCCCHHHHH
Confidence            35789999997 999999999999999999999886            33333332   2334332   23555655443


Q ss_pred             Hh-------cCCccEEEEcCCCcc-----------------------cHHHHHhccccCCEEEEecCC
Q 018067          243 AA-------MGTMDGIIDTVSAVH-----------------------PLMPLIGLLKSQGKLVLVGAP  280 (361)
Q Consensus       243 ~~-------~~g~d~vid~~g~~~-----------------------~~~~~~~~l~~~G~~v~~g~~  280 (361)
                      ++       .+++|++|+++|...                       ..+.++..++.+|+++.+++.
T Consensus        88 ~~~~~~~~~~g~id~lv~nAg~~~~~~~~~~~~~~~~~~~N~~g~~~l~~~~~~~~~~~g~iv~isS~  155 (287)
T 3pxx_A           88 RELANAVAEFGKLDVVVANAGICPLGAHLPVQAFADAFDVDFVGVINTVHAALPYLTSGASIITTGSV  155 (287)
T ss_dssp             HHHHHHHHHHSCCCEEEECCCCCCCCTTCCTHHHHHHHHHHTHHHHHHHHHHGGGCCTTCEEEEECCH
T ss_pred             HHHHHHHHHcCCCCEEEECCCcCcccCcCCHHHHHHHhhhhhhhhHHHHHHHHHHhhcCcEEEEeccc
Confidence            32       247999999998521                       123345566778999999863

>1uls_A Putative 3-oxoacyl-acyl carrier protein reductase; structural genomics, riken structural genomics/proteomics initiative, RSGI; 2.40A {Thermus thermophilus} SCOP: c.2.1.2

Probab=97.41  E-value=0.00086  Score=58.08  Aligned_cols=75  Identities=19%  Similarity=0.363  Sum_probs=57.5

Q ss_pred             CCCEEEEEcC-ChHHHHHHHHHHHcCCeEEEEeCCchhHHHHHHHcCCCE-EecCCCHHHHHHh-------cCCccEEEE
Q 018067          183 PGMHVGVVGL-GGLGHVAVKFAKAMGVKVTVISTSPSKKSEAIERLGADS-FLVSRDQDEMQAA-------MGTMDGIID  253 (361)
Q Consensus       183 ~g~~vlV~Ga-g~vG~~a~~la~~~g~~vi~~~~~~~~~~~~~~~~g~~~-vv~~~~~~~~~~~-------~~g~d~vid  253 (361)
                      .++++||.|+ |++|..+++.+...|++|++++++.++..++.+++|+.. ..|..+++.+.++       .+++|++|+
T Consensus         4 ~~k~vlVTGas~giG~~ia~~l~~~G~~V~~~~r~~~~~~~~~~~~~~~~~~~D~~~~~~~~~~~~~~~~~~g~id~lvn   83 (245)
T 1uls_A            4 KDKAVLITGAAHGIGRATLELFAKEGARLVACDIEEGPLREAAEAVGAHPVVMDVADPASVERGFAEALAHLGRLDGVVH   83 (245)
T ss_dssp             TTCEEEEESTTSHHHHHHHHHHHHTTCEEEEEESCHHHHHHHHHTTTCEEEECCTTCHHHHHHHHHHHHHHHSSCCEEEE
T ss_pred             CCCEEEEECCCCHHHHHHHHHHHHCCCEEEEEeCCHHHHHHHHHHcCCEEEEecCCCHHHHHHHHHHHHHHcCCCCEEEE
Confidence            4678999997 999999999999999999999999887777766666432 2355565544332       247999999


Q ss_pred             cCCC
Q 018067          254 TVSA  257 (361)
Q Consensus       254 ~~g~  257 (361)
                      ++|.
T Consensus        84 ~Ag~   87 (245)
T 1uls_A           84 YAGI   87 (245)
T ss_dssp             CCCC
T ss_pred             CCCC
Confidence            9984

>4hp8_A 2-deoxy-D-gluconate 3-dehydrogenase; enzyme function initiative, EFI, structural genomics, oxidor; HET: NAP; 1.35A {Agrobacterium tumefaciens}

Probab=97.41  E-value=0.00075  Score=58.44  Aligned_cols=75  Identities=17%  Similarity=0.256  Sum_probs=54.7

Q ss_pred             CCCEEEEEcC-ChHHHHHHHHHHHcCCeEEEEeCCch-hHHHHHHHcCCCE---EecCCCHHHHHHhc--CCccEEEEcC
Q 018067          183 PGMHVGVVGL-GGLGHVAVKFAKAMGVKVTVISTSPS-KKSEAIERLGADS---FLVSRDQDEMQAAM--GTMDGIIDTV  255 (361)
Q Consensus       183 ~g~~vlV~Ga-g~vG~~a~~la~~~g~~vi~~~~~~~-~~~~~~~~~g~~~---vv~~~~~~~~~~~~--~g~d~vid~~  255 (361)
                      .|+++||.|+ ++||.++++.+-..|++|++++++.+ +..+..++.|.+.   ..|-.+++.++.+.  +++|+.++++
T Consensus         8 ~GKvalVTGas~GIG~aiA~~la~~Ga~Vvi~~r~~~~~~~~~~~~~g~~~~~~~~Dv~d~~~v~~~~~~g~iDiLVNNA   87 (247)
T 4hp8_A            8 EGRKALVTGANTGLGQAIAVGLAAAGAEVVCAARRAPDETLDIIAKDGGNASALLIDFADPLAAKDSFTDAGFDILVNNA   87 (247)
T ss_dssp             TTCEEEETTTTSHHHHHHHHHHHHTTCEEEEEESSCCHHHHHHHHHTTCCEEEEECCTTSTTTTTTSSTTTCCCEEEECC
T ss_pred             CCCEEEEeCcCCHHHHHHHHHHHHcCCEEEEEeCCcHHHHHHHHHHhCCcEEEEEccCCCHHHHHHHHHhCCCCEEEECC
Confidence            6899999987 99999999999999999999998753 3334446667543   22444444433332  4799999999


Q ss_pred             CC
Q 018067          256 SA  257 (361)
Q Consensus       256 g~  257 (361)
                      |.
T Consensus        88 Gi   89 (247)
T 4hp8_A           88 GI   89 (247)
T ss_dssp             CC
T ss_pred             CC
Confidence            85

>2o23_A HADH2 protein; HSD17B10, schad, ERAB, type II HADH, 2-methyl-3-hydroxybuTyr dehydrogenase, MHBD, structural genomics, structural genomi consortium; HET: NAD GOL; 1.20A {Homo sapiens} SCOP: c.2.1.2 PDB: 1so8_A 1u7t_A* 1e3s_A* 1e3w_B* 1e3w_A* 1e6w_A*

Probab=97.40  E-value=0.00079  Score=58.81  Aligned_cols=75  Identities=17%  Similarity=0.292  Sum_probs=58.0

Q ss_pred             CCCEEEEEcC-ChHHHHHHHHHHHcCCeEEEEeCCchhHHHHHHHcCCCE---EecCCCHHHHHHhc-------CCccEE
Q 018067          183 PGMHVGVVGL-GGLGHVAVKFAKAMGVKVTVISTSPSKKSEAIERLGADS---FLVSRDQDEMQAAM-------GTMDGI  251 (361)
Q Consensus       183 ~g~~vlV~Ga-g~vG~~a~~la~~~g~~vi~~~~~~~~~~~~~~~~g~~~---vv~~~~~~~~~~~~-------~g~d~v  251 (361)
                      .++++||.|+ |.+|..+++.+...|++|++++++.++...+.++++...   ..|..+++.+.++.       +++|++
T Consensus        11 ~~k~vlVTGasggiG~~~a~~l~~~G~~V~~~~r~~~~~~~~~~~~~~~~~~~~~D~~~~~~v~~~~~~~~~~~g~id~l   90 (265)
T 2o23_A           11 KGLVAVITGGASGLGLATAERLVGQGASAVLLDLPNSGGEAQAKKLGNNCVFAPADVTSEKDVQTALALAKGKFGRVDVA   90 (265)
T ss_dssp             TTCEEEEETTTSHHHHHHHHHHHHTTCEEEEEECTTSSHHHHHHHHCTTEEEEECCTTCHHHHHHHHHHHHHHHSCCCEE
T ss_pred             CCCEEEEECCCChHHHHHHHHHHHCCCEEEEEeCCcHhHHHHHHHhCCceEEEEcCCCCHHHHHHHHHHHHHHCCCCCEE
Confidence            5788999998 999999999999999999999999887777767766432   23555555444332       489999


Q ss_pred             EEcCCC
Q 018067          252 IDTVSA  257 (361)
Q Consensus       252 id~~g~  257 (361)
                      |+++|.
T Consensus        91 i~~Ag~   96 (265)
T 2o23_A           91 VNCAGI   96 (265)
T ss_dssp             EECCCC
T ss_pred             EECCcc
Confidence            999984

>3tzq_B Short-chain type dehydrogenase/reductase; ssgcid, structural genomics, seattle structural genomics CEN infectious disease, oxidoreductase; 2.50A {Mycobacterium marinum} SCOP: c.2.1.0

Probab=97.40  E-value=0.00064  Score=59.89  Aligned_cols=76  Identities=14%  Similarity=0.250  Sum_probs=59.5

Q ss_pred             CCCEEEEEcC-ChHHHHHHHHHHHcCCeEEEEeCCchhHHHHHHHcCCC---EEecCCCHHHHHHhc-------CCccEE
Q 018067          183 PGMHVGVVGL-GGLGHVAVKFAKAMGVKVTVISTSPSKKSEAIERLGAD---SFLVSRDQDEMQAAM-------GTMDGI  251 (361)
Q Consensus       183 ~g~~vlV~Ga-g~vG~~a~~la~~~g~~vi~~~~~~~~~~~~~~~~g~~---~vv~~~~~~~~~~~~-------~g~d~v  251 (361)
                      .|+++||.|+ |++|.++++.+...|++|++++++.++..++.++++..   ...|..+++.+.++.       +++|++
T Consensus        10 ~~k~vlVTGas~gIG~aia~~l~~~G~~V~~~~r~~~~~~~~~~~~~~~~~~~~~Dv~~~~~v~~~~~~~~~~~g~id~l   89 (271)
T 3tzq_B           10 ENKVAIITGACGGIGLETSRVLARAGARVVLADLPETDLAGAAASVGRGAVHHVVDLTNEVSVRALIDFTIDTFGRLDIV   89 (271)
T ss_dssp             TTCEEEEETTTSHHHHHHHHHHHHTTCEEEEEECTTSCHHHHHHHHCTTCEEEECCTTCHHHHHHHHHHHHHHHSCCCEE
T ss_pred             CCCEEEEECCCcHHHHHHHHHHHHCCCEEEEEcCCHHHHHHHHHHhCCCeEEEECCCCCHHHHHHHHHHHHHHcCCCCEE
Confidence            5789999997 99999999999999999999999998888877777643   233555655444332       479999


Q ss_pred             EEcCCCc
Q 018067          252 IDTVSAV  258 (361)
Q Consensus       252 id~~g~~  258 (361)
                      |+++|..
T Consensus        90 v~nAg~~   96 (271)
T 3tzq_B           90 DNNAAHS   96 (271)
T ss_dssp             EECCCCC
T ss_pred             EECCCCC
Confidence            9999853

>1c1d_A L-phenylalanine dehydrogenase; amino acid dehydrogenase, oxidative deamination mechanism, oxidoreductase; HET: PHE NAD; 1.25A {Rhodococcus SP} SCOP: c.2.1.7 c.58.1.1 PDB: 1bw9_A* 1c1x_A* 1bw9_B* 1c1d_B* 1c1x_B* 1bxg_B* 1bxg_A*

Probab=97.40  E-value=0.0015  Score=59.59  Aligned_cols=100  Identities=20%  Similarity=0.264  Sum_probs=69.0

Q ss_pred             hhhcCC-CCCCCEEEEEcCChHHHHHHHHHHHcCCeEEEEeCCchhHHHHHHHcCCCEEecCCC----------------
Q 018067          175 LRFYGL-DKPGMHVGVVGLGGLGHVAVKFAKAMGVKVTVISTSPSKKSEAIERLGADSFLVSRD----------------  237 (361)
Q Consensus       175 l~~~~~-~~~g~~vlV~Gag~vG~~a~~la~~~g~~vi~~~~~~~~~~~~~~~~g~~~vv~~~~----------------  237 (361)
                      ++..+. --+|++|.|.|.|.||+.+++.++.+|++|++.+.+.++ .++.+++|++.+ +..+                
T Consensus       165 ~~~~G~~~L~GktV~I~G~GnVG~~~A~~l~~~GakVvvsD~~~~~-~~~a~~~ga~~v-~~~ell~~~~DIliP~A~~~  242 (355)
T 1c1d_A          165 VAHRGLGSLDGLTVLVQGLGAVGGSLASLAAEAGAQLLVADTDTER-VAHAVALGHTAV-ALEDVLSTPCDVFAPCAMGG  242 (355)
T ss_dssp             HHHTTCCCSTTCEEEEECCSHHHHHHHHHHHHTTCEEEEECSCHHH-HHHHHHTTCEEC-CGGGGGGCCCSEEEECSCSC
T ss_pred             HHhcCCCCCCCCEEEEECcCHHHHHHHHHHHHCCCEEEEEeCCccH-HHHHHhcCCEEe-ChHHhhcCccceecHhHHHh
Confidence            444442 257999999999999999999999999999977766554 555567776432 1110                


Q ss_pred             ---HHHHHHhcCCccEEEEcCCCcccHHHHHhccccCCEEEEec
Q 018067          238 ---QDEMQAAMGTMDGIIDTVSAVHPLMPLIGLLKSQGKLVLVG  278 (361)
Q Consensus       238 ---~~~~~~~~~g~d~vid~~g~~~~~~~~~~~l~~~G~~v~~g  278 (361)
                         .+.+..+  +.++|++++.++.+...+.+.|+.+|.++..+
T Consensus       243 ~I~~~~~~~l--k~~iVie~AN~p~t~~eA~~~L~~~gIlv~Pd  284 (355)
T 1c1d_A          243 VITTEVARTL--DCSVVAGAANNVIADEAASDILHARGILYAPD  284 (355)
T ss_dssp             CBCHHHHHHC--CCSEECCSCTTCBCSHHHHHHHHHTTCEECCH
T ss_pred             hcCHHHHhhC--CCCEEEECCCCCCCCHHHHHHHHhCCEEEECC
Confidence               1122222  57888888888775556778888888766554

>1edz_A 5,10-methylenetetrahydrofolate dehydrogenase; nucleotide-binding domain, monofunctional, oxidoreductase; 2.80A {Saccharomyces cerevisiae} SCOP: c.2.1.7 c.58.1.2 PDB: 1ee9_A*

Probab=97.40  E-value=7.7e-05  Score=66.95  Aligned_cols=119  Identities=15%  Similarity=0.111  Sum_probs=80.9

Q ss_pred             cccchhhhhhhhHhhh---------cCCCCCCCEEEEEcCC-hHHHHHHHHHHHcCCeEEEEeCCchhHHHHHHHcCCC-
Q 018067          162 APLLCAGITVYSPLRF---------YGLDKPGMHVGVVGLG-GLGHVAVKFAKAMGVKVTVISTSPSKKSEAIERLGAD-  230 (361)
Q Consensus       162 a~l~~~~~ta~~~l~~---------~~~~~~g~~vlV~Gag-~vG~~a~~la~~~g~~vi~~~~~~~~~~~~~~~~g~~-  230 (361)
                      ..+||....+...+++         .+.--.|.+++|+|+| .+|..+++++...|++|++++++..+.....+.++.. 
T Consensus       146 ~~~PcTp~a~v~ll~~~~~~~~~~~~g~~l~gk~vvVIG~G~iVG~~~A~~L~~~gAtVtv~nR~~~~l~~ra~~la~~~  225 (320)
T 1edz_A          146 SILPCTPLAIVKILEFLKIYNNLLPEGNRLYGKKCIVINRSEIVGRPLAALLANDGATVYSVDVNNIQKFTRGESLKLNK  225 (320)
T ss_dssp             CCCCHHHHHHHHHHHHTTCSCTTSCTTCTTTTCEEEEECCCTTTHHHHHHHHHTTSCEEEEECSSEEEEEESCCCSSCCC
T ss_pred             CcCCCcHHHHHHHHHhhcccccccccCCCCCCCEEEEECCCcchHHHHHHHHHHCCCEEEEEeCchHHHHhHHHHHhhhc
Confidence            4567777777777776         3322478999999997 5799999999999999999888754433332333321 


Q ss_pred             EEe-cC--CCHHHHHHhcCCccEEEEcCCCcccHHHHHhccccCCEEEEecCCC
Q 018067          231 SFL-VS--RDQDEMQAAMGTMDGIIDTVSAVHPLMPLIGLLKSQGKLVLVGAPE  281 (361)
Q Consensus       231 ~vv-~~--~~~~~~~~~~~g~d~vid~~g~~~~~~~~~~~l~~~G~~v~~g~~~  281 (361)
                      +.. ..  .+++.+.+....+|+||.++|.+.. ----+.++++..++++|.+.
T Consensus       226 ~~~t~~~~t~~~~L~e~l~~ADIVIsAtg~p~~-vI~~e~vk~GavVIDVgi~r  278 (320)
T 1edz_A          226 HHVEDLGEYSEDLLKKCSLDSDVVITGVPSENY-KFPTEYIKEGAVCINFACTK  278 (320)
T ss_dssp             CEEEEEEECCHHHHHHHHHHCSEEEECCCCTTC-CBCTTTSCTTEEEEECSSSC
T ss_pred             ccccccccccHhHHHHHhccCCEEEECCCCCcc-eeCHHHcCCCeEEEEcCCCc
Confidence            100 00  1224566666789999999999763 12234478888888998754

>3edm_A Short chain dehydrogenase; structural genomics, oxidoreductase, PSI-2, P structure initiative; 2.30A {Agrobacterium tumefaciens str}

Probab=97.40  E-value=0.00095  Score=58.34  Aligned_cols=97  Identities=15%  Similarity=0.250  Sum_probs=65.0

Q ss_pred             CCCEEEEEcC-ChHHHHHHHHHHHcCCeEEEE-eCCchhHHHHHHH---cCCC---EEecCCCHHHHHHh-------cCC
Q 018067          183 PGMHVGVVGL-GGLGHVAVKFAKAMGVKVTVI-STSPSKKSEAIER---LGAD---SFLVSRDQDEMQAA-------MGT  247 (361)
Q Consensus       183 ~g~~vlV~Ga-g~vG~~a~~la~~~g~~vi~~-~~~~~~~~~~~~~---~g~~---~vv~~~~~~~~~~~-------~~g  247 (361)
                      .|+++||.|+ |++|.++++.+...|++|+++ .++.++.....++   .+..   ...|-.+.+.+.++       .++
T Consensus         7 ~~k~vlVTGas~GIG~aia~~la~~G~~V~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~Dv~~~~~v~~~~~~~~~~~g~   86 (259)
T 3edm_A            7 TNRTIVVAGAGRDIGRACAIRFAQEGANVVLTYNGAAEGAATAVAEIEKLGRSALAIKADLTNAAEVEAAISAAADKFGE   86 (259)
T ss_dssp             TTCEEEEETTTSHHHHHHHHHHHHTTCEEEEEECSSCHHHHHHHHHHHTTTSCCEEEECCTTCHHHHHHHHHHHHHHHCS
T ss_pred             CCCEEEEECCCchHHHHHHHHHHHCCCEEEEEcCCCHHHHHHHHHHHHhcCCceEEEEcCCCCHHHHHHHHHHHHHHhCC
Confidence            5789999997 999999999999999999998 4444444433333   3432   12355555444332       247


Q ss_pred             ccEEEEcCCCcc--------------------------cHHHHHhccccCCEEEEecC
Q 018067          248 MDGIIDTVSAVH--------------------------PLMPLIGLLKSQGKLVLVGA  279 (361)
Q Consensus       248 ~d~vid~~g~~~--------------------------~~~~~~~~l~~~G~~v~~g~  279 (361)
                      +|++|+++|...                          ..+.++..++++|+++.+++
T Consensus        87 id~lv~nAg~~~~~~~~~~~~~~~~~~~~~vN~~g~~~~~~~~~~~~~~~g~iv~isS  144 (259)
T 3edm_A           87 IHGLVHVAGGLIARKTIAEMDEAFWHQVLDVNLTSLFLTAKTALPKMAKGGAIVTFSS  144 (259)
T ss_dssp             EEEEEECCCCCCCCCCTTTCCHHHHHHHHHHHTHHHHHHHHHHGGGEEEEEEEEEECC
T ss_pred             CCEEEECCCccCCCCChhhCCHHHHHHHHHHHHHHHHHHHHHHHHHHhcCCEEEEEcC
Confidence            999999997430                          12234455666899999976

>3o26_A Salutaridine reductase; short chain dehydrogenase/reductases, oxidoreductase; HET: NDP; 1.91A {Papaver somniferum} SCOP: c.2.1.0

Probab=97.39  E-value=0.0012  Score=59.11  Aligned_cols=76  Identities=22%  Similarity=0.315  Sum_probs=54.7

Q ss_pred             CCCCEEEEEcC-ChHHHHHHHHHHHcCCeEEEEeCCchhHHHHHHHc---C-CC---EEecCCCH-HHHHHh-------c
Q 018067          182 KPGMHVGVVGL-GGLGHVAVKFAKAMGVKVTVISTSPSKKSEAIERL---G-AD---SFLVSRDQ-DEMQAA-------M  245 (361)
Q Consensus       182 ~~g~~vlV~Ga-g~vG~~a~~la~~~g~~vi~~~~~~~~~~~~~~~~---g-~~---~vv~~~~~-~~~~~~-------~  245 (361)
                      ..++++||.|+ |+||..++..+...|++|++++++.++..+..+++   + ..   ...|..+. +.+..+       .
T Consensus        10 ~~~k~vlITGas~GIG~~~a~~L~~~G~~V~~~~r~~~~~~~~~~~l~~~~~~~~~~~~~Dl~~~~~~v~~~~~~~~~~~   89 (311)
T 3o26_A           10 TKRRCAVVTGGNKGIGFEICKQLSSNGIMVVLTCRDVTKGHEAVEKLKNSNHENVVFHQLDVTDPIATMSSLADFIKTHF   89 (311)
T ss_dssp             --CCEEEESSCSSHHHHHHHHHHHHTTCEEEEEESCHHHHHHHHHHHHTTTCCSEEEEECCTTSCHHHHHHHHHHHHHHH
T ss_pred             CCCcEEEEecCCchHHHHHHHHHHHCCCEEEEEeCCHHHHHHHHHHHHhcCCCceEEEEccCCCcHHHHHHHHHHHHHhC
Confidence            35788999997 99999999999999999999999988766655544   2 11   12345554 433322       2


Q ss_pred             CCccEEEEcCCC
Q 018067          246 GTMDGIIDTVSA  257 (361)
Q Consensus       246 ~g~d~vid~~g~  257 (361)
                      +++|++|+++|.
T Consensus        90 g~iD~lv~nAg~  101 (311)
T 3o26_A           90 GKLDILVNNAGV  101 (311)
T ss_dssp             SSCCEEEECCCC
T ss_pred             CCCCEEEECCcc
Confidence            589999999985

>3p2o_A Bifunctional protein fold; structural genomics, center for structural genomics of infec diseases, csgid, alpha-beta-alpha sandwich; HET: NAD; 2.23A {Campylobacter jejuni subsp}

Probab=97.39  E-value=0.00064  Score=59.66  Aligned_cols=95  Identities=22%  Similarity=0.258  Sum_probs=74.4

Q ss_pred             ccchhhhhhhhHhhhcCCCCCCCEEEEEcCC-hHHHHHHHHHHHcCCeEEEEeCCchhHHHHHHHcCCCEEecCCCHHHH
Q 018067          163 PLLCAGITVYSPLRFYGLDKPGMHVGVVGLG-GLGHVAVKFAKAMGVKVTVISTSPSKKSEAIERLGADSFLVSRDQDEM  241 (361)
Q Consensus       163 ~l~~~~~ta~~~l~~~~~~~~g~~vlV~Gag-~vG~~a~~la~~~g~~vi~~~~~~~~~~~~~~~~g~~~vv~~~~~~~~  241 (361)
                      .+||+...+...+++...--.|++++|+|.| .+|..++.++...|++|+++.+....                     +
T Consensus       139 ~~PcTp~gv~~lL~~~~i~l~Gk~vvVvGrs~iVG~p~A~lL~~~gAtVtv~h~~t~~---------------------L  197 (285)
T 3p2o_A          139 FLPCTPLGVMKLLKAYEIDLEGKDAVIIGASNIVGRPMATMLLNAGATVSVCHIKTKD---------------------L  197 (285)
T ss_dssp             CCCHHHHHHHHHHHHTTCCCTTCEEEEECCCTTTHHHHHHHHHHTTCEEEEECTTCSC---------------------H
T ss_pred             CCCCCHHHHHHHHHHhCCCCCCCEEEEECCCchHHHHHHHHHHHCCCeEEEEeCCchh---------------------H
Confidence            4677777788888887755689999999985 58999999999999999887654322                     2


Q ss_pred             HHhcCCccEEEEcCCCcccHHHHHhccccCCEEEEecCC
Q 018067          242 QAAMGTMDGIIDTVSAVHPLMPLIGLLKSQGKLVLVGAP  280 (361)
Q Consensus       242 ~~~~~g~d~vid~~g~~~~~~~~~~~l~~~G~~v~~g~~  280 (361)
                      .+....+|++|.++|.+..+  -.+.++++..++.+|..
T Consensus       198 ~~~~~~ADIVI~Avg~p~~I--~~~~vk~GavVIDVgi~  234 (285)
T 3p2o_A          198 SLYTRQADLIIVAAGCVNLL--RSDMVKEGVIVVDVGIN  234 (285)
T ss_dssp             HHHHTTCSEEEECSSCTTCB--CGGGSCTTEEEEECCCE
T ss_pred             HHHhhcCCEEEECCCCCCcC--CHHHcCCCeEEEEeccC
Confidence            34455789999999988643  34667999999999875

>3r3s_A Oxidoreductase; structural genomics, csgid, center for structural genomics O infectious diseases, 3-layer(ABA) sandwich, rossmann fold; HET: NAD; 1.25A {Salmonella enterica subsp}

Probab=97.38  E-value=0.0026  Score=56.64  Aligned_cols=98  Identities=17%  Similarity=0.168  Sum_probs=66.6

Q ss_pred             CCCEEEEEcC-ChHHHHHHHHHHHcCCeEEEEeCCch--hHH---HHHHHcCCCEEe---cCCCHHHHHHh-------cC
Q 018067          183 PGMHVGVVGL-GGLGHVAVKFAKAMGVKVTVISTSPS--KKS---EAIERLGADSFL---VSRDQDEMQAA-------MG  246 (361)
Q Consensus       183 ~g~~vlV~Ga-g~vG~~a~~la~~~g~~vi~~~~~~~--~~~---~~~~~~g~~~vv---~~~~~~~~~~~-------~~  246 (361)
                      .|+++||.|+ |++|.+++..+...|++|++++++.+  ...   ...++.|....+   |..+++.++++       .+
T Consensus        48 ~~k~vlVTGas~GIG~aia~~la~~G~~V~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~Dv~d~~~v~~~~~~~~~~~g  127 (294)
T 3r3s_A           48 KDRKALVTGGDSGIGRAAAIAYAREGADVAINYLPAEEEDAQQVKALIEECGRKAVLLPGDLSDESFARSLVHKAREALG  127 (294)
T ss_dssp             TTCEEEEETTTSHHHHHHHHHHHHTTCEEEEECCGGGHHHHHHHHHHHHHTTCCEEECCCCTTSHHHHHHHHHHHHHHHT
T ss_pred             CCCEEEEeCCCcHHHHHHHHHHHHCCCEEEEEeCCcchhHHHHHHHHHHHcCCcEEEEEecCCCHHHHHHHHHHHHHHcC
Confidence            5789999997 99999999999999999999887632  222   223344543322   44454433332       25


Q ss_pred             CccEEEEcCCCcc--------------------------cHHHHHhccccCCEEEEecCC
Q 018067          247 TMDGIIDTVSAVH--------------------------PLMPLIGLLKSQGKLVLVGAP  280 (361)
Q Consensus       247 g~d~vid~~g~~~--------------------------~~~~~~~~l~~~G~~v~~g~~  280 (361)
                      ++|++|+++|...                          ..+.++..++++|++|.+++.
T Consensus       128 ~iD~lv~nAg~~~~~~~~~~~~~~~~~~~~~vN~~g~~~l~~~~~~~~~~~g~Iv~isS~  187 (294)
T 3r3s_A          128 GLDILALVAGKQTAIPEIKDLTSEQFQQTFAVNVFALFWITQEAIPLLPKGASIITTSSI  187 (294)
T ss_dssp             CCCEEEECCCCCCCCSSGGGCCHHHHHHHHHHHTHHHHHHHHHHGGGCCTTCEEEEECCG
T ss_pred             CCCEEEECCCCcCCCCCcccCCHHHHHHHHHHHhHHHHHHHHHHHHHhhcCCEEEEECCh
Confidence            8999999998521                          223355567778999999864

>1yb1_A 17-beta-hydroxysteroid dehydrogenase type XI; short chain dehydrogenase, HUM structural genomics, structural genomics consortium, SGC; HET: AE2; 1.95A {Homo sapiens} SCOP: c.2.1.2

Probab=97.37  E-value=0.0025  Score=56.06  Aligned_cols=75  Identities=13%  Similarity=0.274  Sum_probs=55.0

Q ss_pred             CCCEEEEEcC-ChHHHHHHHHHHHcCCeEEEEeCCchhHHHHHHHc---CCCE---EecCCCHHHHHHh-------cCCc
Q 018067          183 PGMHVGVVGL-GGLGHVAVKFAKAMGVKVTVISTSPSKKSEAIERL---GADS---FLVSRDQDEMQAA-------MGTM  248 (361)
Q Consensus       183 ~g~~vlV~Ga-g~vG~~a~~la~~~g~~vi~~~~~~~~~~~~~~~~---g~~~---vv~~~~~~~~~~~-------~~g~  248 (361)
                      .++++||.|+ |.+|..++..+...|++|++++++.++...+.+++   +...   ..|..+++.+.++       .+++
T Consensus        30 ~~k~vlITGasggIG~~la~~L~~~G~~V~~~~r~~~~~~~~~~~l~~~~~~~~~~~~Dl~~~~~v~~~~~~~~~~~g~i  109 (272)
T 1yb1_A           30 TGEIVLITGAGHGIGRLTAYEFAKLKSKLVLWDINKHGLEETAAKCKGLGAKVHTFVVDCSNREDIYSSAKKVKAEIGDV  109 (272)
T ss_dssp             TTCEEEEETTTSHHHHHHHHHHHHTTCEEEEEESCHHHHHHHHHHHHHTTCCEEEEECCTTCHHHHHHHHHHHHHHTCCC
T ss_pred             CCCEEEEECCCchHHHHHHHHHHHCCCEEEEEEcCHHHHHHHHHHHHhcCCeEEEEEeeCCCHHHHHHHHHHHHHHCCCC
Confidence            5788999997 99999999999999999999999887665554433   4331   2355555443332       2479


Q ss_pred             cEEEEcCCC
Q 018067          249 DGIIDTVSA  257 (361)
Q Consensus       249 d~vid~~g~  257 (361)
                      |++|+++|.
T Consensus       110 D~li~~Ag~  118 (272)
T 1yb1_A          110 SILVNNAGV  118 (272)
T ss_dssp             SEEEECCCC
T ss_pred             cEEEECCCc
Confidence            999999985

>1ja9_A 4HNR, 1,3,6,8-tetrahydroxynaphthalene reductase; protein-NADPH-active site inhibitor complex, oxidoreductase, chain dehydrogenase; HET: NDP PYQ; 1.50A {Magnaporthe grisea} SCOP: c.2.1.2

Probab=97.37  E-value=0.00082  Score=58.98  Aligned_cols=75  Identities=21%  Similarity=0.218  Sum_probs=53.3

Q ss_pred             CCCEEEEEcC-ChHHHHHHHHHHHcCCeEEEEeC-CchhHHHHHHH---cCCCE---EecCCCHHHHHHhc-------CC
Q 018067          183 PGMHVGVVGL-GGLGHVAVKFAKAMGVKVTVIST-SPSKKSEAIER---LGADS---FLVSRDQDEMQAAM-------GT  247 (361)
Q Consensus       183 ~g~~vlV~Ga-g~vG~~a~~la~~~g~~vi~~~~-~~~~~~~~~~~---~g~~~---vv~~~~~~~~~~~~-------~g  247 (361)
                      .++++||.|+ |.+|...+..+...|++|+++++ +.++...+.++   .+...   ..|..+++.+.++.       ++
T Consensus        20 ~~k~vlItGasggiG~~la~~l~~~G~~v~~~~r~~~~~~~~~~~~l~~~~~~~~~~~~D~~~~~~~~~~~~~~~~~~~~   99 (274)
T 1ja9_A           20 AGKVALTTGAGRGIGRGIAIELGRRGASVVVNYGSSSKAAEEVVAELKKLGAQGVAIQADISKPSEVVALFDKAVSHFGG   99 (274)
T ss_dssp             TTCEEEETTTTSHHHHHHHHHHHHTTCEEEEEESSCHHHHHHHHHHHHHTTCCEEEEECCTTSHHHHHHHHHHHHHHHSC
T ss_pred             CCCEEEEeCCCchHHHHHHHHHHHCCCEEEEEcCCchHHHHHHHHHHHhcCCcEEEEEecCCCHHHHHHHHHHHHHHcCC
Confidence            5788999997 99999999999999999999998 55554443333   35432   23555555444332       48


Q ss_pred             ccEEEEcCCC
Q 018067          248 MDGIIDTVSA  257 (361)
Q Consensus       248 ~d~vid~~g~  257 (361)
                      +|++|+++|.
T Consensus       100 ~d~vi~~Ag~  109 (274)
T 1ja9_A          100 LDFVMSNSGM  109 (274)
T ss_dssp             EEEEECCCCC
T ss_pred             CCEEEECCCC
Confidence            9999999984

>3n74_A 3-ketoacyl-(acyl-carrier-protein) reductase; seattle structural genomics center for infectious disease, S brucellosis; 2.20A {Brucella melitensis biovar abortus}

Probab=97.37  E-value=0.00082  Score=58.68  Aligned_cols=75  Identities=17%  Similarity=0.282  Sum_probs=58.7

Q ss_pred             CCCEEEEEcC-ChHHHHHHHHHHHcCCeEEEEeCCchhHHHHHHHcCCCE---EecCCCHHHHHHh-------cCCccEE
Q 018067          183 PGMHVGVVGL-GGLGHVAVKFAKAMGVKVTVISTSPSKKSEAIERLGADS---FLVSRDQDEMQAA-------MGTMDGI  251 (361)
Q Consensus       183 ~g~~vlV~Ga-g~vG~~a~~la~~~g~~vi~~~~~~~~~~~~~~~~g~~~---vv~~~~~~~~~~~-------~~g~d~v  251 (361)
                      .++++||.|+ |++|.++++.+...|++|++++++.++..++.++++...   ..|..+.+.+.++       .+++|++
T Consensus         8 ~~k~vlITGas~gIG~~~a~~l~~~G~~V~~~~r~~~~~~~~~~~~~~~~~~~~~D~~~~~~~~~~~~~~~~~~g~id~l   87 (261)
T 3n74_A            8 EGKVALITGAGSGFGEGMAKRFAKGGAKVVIVDRDKAGAERVAGEIGDAALAVAADISKEADVDAAVEAALSKFGKVDIL   87 (261)
T ss_dssp             TTCEEEEETTTSHHHHHHHHHHHHTTCEEEEEESCHHHHHHHHHHHCTTEEEEECCTTSHHHHHHHHHHHHHHHSCCCEE
T ss_pred             CCCEEEEECCCchHHHHHHHHHHHCCCEEEEEcCCHHHHHHHHHHhCCceEEEEecCCCHHHHHHHHHHHHHhcCCCCEE
Confidence            5788999997 999999999999999999999999988888877777542   2344555443332       2479999


Q ss_pred             EEcCCC
Q 018067          252 IDTVSA  257 (361)
Q Consensus       252 id~~g~  257 (361)
                      |+++|.
T Consensus        88 i~~Ag~   93 (261)
T 3n74_A           88 VNNAGI   93 (261)
T ss_dssp             EECCCC
T ss_pred             EECCcc
Confidence            999984

>3rkr_A Short chain oxidoreductase; rossmann fold; HET: NAP; 2.42A {Uncultured bacterium BIO5}

Probab=97.36  E-value=0.0027  Score=55.42  Aligned_cols=75  Identities=17%  Similarity=0.282  Sum_probs=56.0

Q ss_pred             CCCEEEEEcC-ChHHHHHHHHHHHcCCeEEEEeCCchhHHHHHHHc---CCC---EEecCCCHHHHHHh-------cCCc
Q 018067          183 PGMHVGVVGL-GGLGHVAVKFAKAMGVKVTVISTSPSKKSEAIERL---GAD---SFLVSRDQDEMQAA-------MGTM  248 (361)
Q Consensus       183 ~g~~vlV~Ga-g~vG~~a~~la~~~g~~vi~~~~~~~~~~~~~~~~---g~~---~vv~~~~~~~~~~~-------~~g~  248 (361)
                      .++++||.|+ |++|..++..+...|++|++++++.++...+.+++   +..   ...|..+.+.+..+       .+.+
T Consensus        28 ~~k~vlITGas~gIG~~la~~l~~~G~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~D~~~~~~v~~~~~~~~~~~g~i  107 (262)
T 3rkr_A           28 SGQVAVVTGASRGIGAAIARKLGSLGARVVLTARDVEKLRAVEREIVAAGGEAESHACDLSHSDAIAAFATGVLAAHGRC  107 (262)
T ss_dssp             TTCEEEESSTTSHHHHHHHHHHHHTTCEEEEEESCHHHHHHHHHHHHHTTCEEEEEECCTTCHHHHHHHHHHHHHHHSCC
T ss_pred             CCCEEEEECCCChHHHHHHHHHHHCCCEEEEEECCHHHHHHHHHHHHHhCCceeEEEecCCCHHHHHHHHHHHHHhcCCC
Confidence            5789999987 99999999999999999999999988766665443   332   12355555444332       2479


Q ss_pred             cEEEEcCCC
Q 018067          249 DGIIDTVSA  257 (361)
Q Consensus       249 d~vid~~g~  257 (361)
                      |++|+++|.
T Consensus       108 d~lv~~Ag~  116 (262)
T 3rkr_A          108 DVLVNNAGV  116 (262)
T ss_dssp             SEEEECCCC
T ss_pred             CEEEECCCc
Confidence            999999985

>3grk_A Enoyl-(acyl-carrier-protein) reductase (NADH); ssgcid, niaid, structural genomics, seattle structural genomics center for infectious disease; 2.35A {Brucella melitensis} PDB: 4eit_A*

Probab=97.36  E-value=0.0017  Score=57.81  Aligned_cols=99  Identities=15%  Similarity=0.161  Sum_probs=67.4

Q ss_pred             CCCCEEEEEcC-Ch--HHHHHHHHHHHcCCeEEEEeCCchh---HHHHHHHcCCCE--EecCCCHHHHHHh-------cC
Q 018067          182 KPGMHVGVVGL-GG--LGHVAVKFAKAMGVKVTVISTSPSK---KSEAIERLGADS--FLVSRDQDEMQAA-------MG  246 (361)
Q Consensus       182 ~~g~~vlV~Ga-g~--vG~~a~~la~~~g~~vi~~~~~~~~---~~~~~~~~g~~~--vv~~~~~~~~~~~-------~~  246 (361)
                      -.|+++||.|+ |.  +|.++++.+...|++|++++++++.   ..++.++.+...  ..|-.+++.+.++       .+
T Consensus        29 l~gk~~lVTGasg~~GIG~aia~~la~~G~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~Dv~d~~~v~~~~~~~~~~~g  108 (293)
T 3grk_A           29 LQGKRGLILGVANNRSIAWGIAKAAREAGAELAFTYQGDALKKRVEPLAEELGAFVAGHCDVADAASIDAVFETLEKKWG  108 (293)
T ss_dssp             TTTCEEEEECCCSSSSHHHHHHHHHHHTTCEEEEEECSHHHHHHHHHHHHHHTCEEEEECCTTCHHHHHHHHHHHHHHTS
T ss_pred             CCCCEEEEEcCCCCCcHHHHHHHHHHHCCCEEEEEcCCHHHHHHHHHHHHhcCCceEEECCCCCHHHHHHHHHHHHHhcC
Confidence            46789999987 66  9999999999999999999888542   233333444322  2355565444332       24


Q ss_pred             CccEEEEcCCCcc-----------------------------cHHHHHhccccCCEEEEecCC
Q 018067          247 TMDGIIDTVSAVH-----------------------------PLMPLIGLLKSQGKLVLVGAP  280 (361)
Q Consensus       247 g~d~vid~~g~~~-----------------------------~~~~~~~~l~~~G~~v~~g~~  280 (361)
                      ++|++|+++|...                             ..+.++..++++|+++.+++.
T Consensus       109 ~iD~lVnnAG~~~~~~~~~~~~~~~~~~~~~~~~~N~~g~~~l~~~~~~~m~~~g~Iv~isS~  171 (293)
T 3grk_A          109 KLDFLVHAIGFSDKDELTGRYIDTSEANFTNTMLISVYSLTAVSRRAEKLMADGGSILTLTYY  171 (293)
T ss_dssp             CCSEEEECCCCCCHHHHTSCGGGCCHHHHHHHHHHHTHHHHHHHHHHHHHTTTCEEEEEEECG
T ss_pred             CCCEEEECCccCCcccccccccccCHHHHHHHHHHHHHHHHHHHHHHHHhccCCCEEEEEeeh
Confidence            7999999998531                             223345566778999999864

>1vl8_A Gluconate 5-dehydrogenase; TM0441, structural genomics, JCSG structure initiative, PSI, joint center for structural GENO oxidoreductase; HET: NAP; 2.07A {Thermotoga maritima} SCOP: c.2.1.2

Probab=97.36  E-value=0.0011  Score=58.30  Aligned_cols=76  Identities=24%  Similarity=0.314  Sum_probs=56.5

Q ss_pred             CCCCEEEEEcC-ChHHHHHHHHHHHcCCeEEEEeCCchhHHHHHHHc----CCCE---EecCCCHHHHHHh-------cC
Q 018067          182 KPGMHVGVVGL-GGLGHVAVKFAKAMGVKVTVISTSPSKKSEAIERL----GADS---FLVSRDQDEMQAA-------MG  246 (361)
Q Consensus       182 ~~g~~vlV~Ga-g~vG~~a~~la~~~g~~vi~~~~~~~~~~~~~~~~----g~~~---vv~~~~~~~~~~~-------~~  246 (361)
                      -.++++||.|+ |++|.++++.+...|++|++++++.++...+.+++    +...   ..|..+++.+.++       .+
T Consensus        19 l~~k~~lVTGas~gIG~~ia~~l~~~G~~V~~~~r~~~~~~~~~~~l~~~~~~~~~~~~~Dl~~~~~v~~~~~~~~~~~g   98 (267)
T 1vl8_A           19 LRGRVALVTGGSRGLGFGIAQGLAEAGCSVVVASRNLEEASEAAQKLTEKYGVETMAFRCDVSNYEEVKKLLEAVKEKFG   98 (267)
T ss_dssp             CTTCEEEEETTTSHHHHHHHHHHHHTTCEEEEEESCHHHHHHHHHHHHHHHCCCEEEEECCTTCHHHHHHHHHHHHHHHS
T ss_pred             CCCCEEEEECCCCHHHHHHHHHHHHCCCEEEEEeCCHHHHHHHHHHHHHhcCCeEEEEEcCCCCHHHHHHHHHHHHHHcC
Confidence            35788999997 99999999999999999999999887766554444    5432   2355565544332       24


Q ss_pred             CccEEEEcCCC
Q 018067          247 TMDGIIDTVSA  257 (361)
Q Consensus       247 g~d~vid~~g~  257 (361)
                      ++|++|+++|.
T Consensus        99 ~iD~lvnnAg~  109 (267)
T 1vl8_A           99 KLDTVVNAAGI  109 (267)
T ss_dssp             CCCEEEECCCC
T ss_pred             CCCEEEECCCc
Confidence            79999999985

>1fmc_A 7 alpha-hydroxysteroid dehydrogenase; short-chain dehydrogenase/reductase, bIle acid catabolism, oxidoreductase; HET: CHO NAD; 1.80A {Escherichia coli} SCOP: c.2.1.2 PDB: 1ahi_A* 1ahh_A*

Probab=97.36  E-value=0.0011  Score=57.36  Aligned_cols=75  Identities=16%  Similarity=0.293  Sum_probs=54.8

Q ss_pred             CCCEEEEEcC-ChHHHHHHHHHHHcCCeEEEEeCCchhHHHHHHHc---CCCE---EecCCCHHHHHHhc-------CCc
Q 018067          183 PGMHVGVVGL-GGLGHVAVKFAKAMGVKVTVISTSPSKKSEAIERL---GADS---FLVSRDQDEMQAAM-------GTM  248 (361)
Q Consensus       183 ~g~~vlV~Ga-g~vG~~a~~la~~~g~~vi~~~~~~~~~~~~~~~~---g~~~---vv~~~~~~~~~~~~-------~g~  248 (361)
                      .++++||.|+ |.+|..+++.+...|++|++++++.++...+.+++   +...   ..|..+++.+.++.       +++
T Consensus        10 ~~~~vlVtGasggiG~~la~~l~~~G~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~D~~~~~~~~~~~~~~~~~~~~~   89 (255)
T 1fmc_A           10 DGKCAIITGAGAGIGKEIAITFATAGASVVVSDINADAANHVVDEIQQLGGQAFACRCDITSEQELSALADFAISKLGKV   89 (255)
T ss_dssp             TTCEEEETTTTSHHHHHHHHHHHTTTCEEEEEESCHHHHHHHHHHHHHTTCCEEEEECCTTCHHHHHHHHHHHHHHHSSC
T ss_pred             CCCEEEEECCccHHHHHHHHHHHHCCCEEEEEcCCHHHHHHHHHHHHHhCCceEEEEcCCCCHHHHHHHHHHHHHhcCCC
Confidence            5688999997 99999999999999999999999887655544433   4322   23555555444332       489


Q ss_pred             cEEEEcCCC
Q 018067          249 DGIIDTVSA  257 (361)
Q Consensus       249 d~vid~~g~  257 (361)
                      |++|+++|.
T Consensus        90 d~vi~~Ag~   98 (255)
T 1fmc_A           90 DILVNNAGG   98 (255)
T ss_dssp             CEEEECCCC
T ss_pred             CEEEECCCC
Confidence            999999985

>3t4x_A Oxidoreductase, short chain dehydrogenase/reducta; structural genomics, center for structural genomics of infec diseases, csgid; 2.80A {Bacillus anthracis}

Probab=97.35  E-value=0.00063  Score=59.77  Aligned_cols=75  Identities=19%  Similarity=0.220  Sum_probs=55.4

Q ss_pred             CCCEEEEEcC-ChHHHHHHHHHHHcCCeEEEEeCCchhHHHHHHHc-----CCC---EEecCCCHHHHHHhc---CCccE
Q 018067          183 PGMHVGVVGL-GGLGHVAVKFAKAMGVKVTVISTSPSKKSEAIERL-----GAD---SFLVSRDQDEMQAAM---GTMDG  250 (361)
Q Consensus       183 ~g~~vlV~Ga-g~vG~~a~~la~~~g~~vi~~~~~~~~~~~~~~~~-----g~~---~vv~~~~~~~~~~~~---~g~d~  250 (361)
                      .|+++||.|+ |++|.++++.+...|++|++++++.++..+..+++     +..   ...|..+++.+.++.   +++|+
T Consensus         9 ~~k~~lVTGas~gIG~aia~~l~~~G~~V~~~~r~~~~~~~~~~~l~~~~~~~~~~~~~~D~~~~~~~~~~~~~~g~id~   88 (267)
T 3t4x_A            9 KGKTALVTGSTAGIGKAIATSLVAEGANVLINGRREENVNETIKEIRAQYPDAILQPVVADLGTEQGCQDVIEKYPKVDI   88 (267)
T ss_dssp             TTCEEEETTCSSHHHHHHHHHHHHTTCEEEEEESSHHHHHHHHHHHHHHCTTCEEEEEECCTTSHHHHHHHHHHCCCCSE
T ss_pred             CCCEEEEeCCCcHHHHHHHHHHHHCCCEEEEEeCCHHHHHHHHHHHHhhCCCceEEEEecCCCCHHHHHHHHHhcCCCCE
Confidence            5788999987 99999999999999999999999987765554443     221   122455555444433   47999


Q ss_pred             EEEcCCC
Q 018067          251 IIDTVSA  257 (361)
Q Consensus       251 vid~~g~  257 (361)
                      +|+++|.
T Consensus        89 lv~nAg~   95 (267)
T 3t4x_A           89 LINNLGI   95 (267)
T ss_dssp             EEECCCC
T ss_pred             EEECCCC
Confidence            9999985

>3ai3_A NADPH-sorbose reductase; rossmann-fold, NADPH-dependent reductase, short chain dehydrogenase/reductase, oxidoreductase; HET: NAP SOL SOE; 1.80A {Gluconobacter frateurii} PDB: 3ai2_A* 3ai1_A*

Probab=97.35  E-value=0.0011  Score=58.05  Aligned_cols=75  Identities=16%  Similarity=0.273  Sum_probs=55.5

Q ss_pred             CCCEEEEEcC-ChHHHHHHHHHHHcCCeEEEEeCCchhHHHHHHHc----CCCE---EecCCCHHHHHHh-------cCC
Q 018067          183 PGMHVGVVGL-GGLGHVAVKFAKAMGVKVTVISTSPSKKSEAIERL----GADS---FLVSRDQDEMQAA-------MGT  247 (361)
Q Consensus       183 ~g~~vlV~Ga-g~vG~~a~~la~~~g~~vi~~~~~~~~~~~~~~~~----g~~~---vv~~~~~~~~~~~-------~~g  247 (361)
                      .++++||.|+ |++|..+++.+...|++|++++++.++...+.+++    +...   ..|..+++.+.++       .++
T Consensus         6 ~~k~vlVTGas~gIG~~ia~~l~~~G~~V~~~~r~~~~~~~~~~~l~~~~~~~~~~~~~D~~~~~~~~~~~~~~~~~~g~   85 (263)
T 3ai3_A            6 SGKVAVITGSSSGIGLAIAEGFAKEGAHIVLVARQVDRLHEAARSLKEKFGVRVLEVAVDVATPEGVDAVVESVRSSFGG   85 (263)
T ss_dssp             TTCEEEEESCSSHHHHHHHHHHHHTTCEEEEEESCHHHHHHHHHHHHHHHCCCEEEEECCTTSHHHHHHHHHHHHHHHSS
T ss_pred             CCCEEEEECCCchHHHHHHHHHHHCCCEEEEEcCCHHHHHHHHHHHHHhcCCceEEEEcCCCCHHHHHHHHHHHHHHcCC
Confidence            4688999997 99999999999999999999999887665554443    5332   2355555544433       247


Q ss_pred             ccEEEEcCCC
Q 018067          248 MDGIIDTVSA  257 (361)
Q Consensus       248 ~d~vid~~g~  257 (361)
                      +|++|+++|.
T Consensus        86 id~lv~~Ag~   95 (263)
T 3ai3_A           86 ADILVNNAGT   95 (263)
T ss_dssp             CSEEEECCCC
T ss_pred             CCEEEECCCC
Confidence            9999999984

>1a4i_A Methylenetetrahydrofolate dehydrogenase / methenyltetrahydrofolate cyclohydrolase...; THF, bifunctional, oxidoreductase; HET: NDP; 1.50A {Homo sapiens} SCOP: c.2.1.7 c.58.1.2 PDB: 1dia_A* 1dib_A* 1dig_A*

Probab=97.35  E-value=0.0009  Score=59.16  Aligned_cols=96  Identities=14%  Similarity=0.119  Sum_probs=74.5

Q ss_pred             cccchhhhhhhhHhhhcCCCCCCCEEEEEcCC-hHHHHHHHHHHHcCCeEEEEeCCchhHHHHHHHcCCCEEecCCCHHH
Q 018067          162 APLLCAGITVYSPLRFYGLDKPGMHVGVVGLG-GLGHVAVKFAKAMGVKVTVISTSPSKKSEAIERLGADSFLVSRDQDE  240 (361)
Q Consensus       162 a~l~~~~~ta~~~l~~~~~~~~g~~vlV~Gag-~vG~~a~~la~~~g~~vi~~~~~~~~~~~~~~~~g~~~vv~~~~~~~  240 (361)
                      ..+||+.......+++...--.|.+++|+|+| .+|.-+++++...|++|+++.+..+.                     
T Consensus       143 ~~~PcTp~gi~~ll~~~~i~l~gk~vvVIG~s~iVG~p~A~lL~~~gAtVtv~hs~t~~---------------------  201 (301)
T 1a4i_A          143 CFIPCTPKGCLELIKETGVPIAGRHAVVVGRSKIVGAPMHDLLLWNNATVTTCHSKTAH---------------------  201 (301)
T ss_dssp             CCCCHHHHHHHHHHHTTTCCCTTCEEEEECCCTTTHHHHHHHHHHTTCEEEEECTTCSS---------------------
T ss_pred             CccCchHHHHHHHHHHcCCCCCCCEEEEECCCchHHHHHHHHHHhCCCeEEEEECCccc---------------------
Confidence            45677777777778777644689999999997 68999999999999999987644322                     


Q ss_pred             HHHhcCCccEEEEcCCCcccHHHHHhccccCCEEEEecCC
Q 018067          241 MQAAMGTMDGIIDTVSAVHPLMPLIGLLKSQGKLVLVGAP  280 (361)
Q Consensus       241 ~~~~~~g~d~vid~~g~~~~~~~~~~~l~~~G~~v~~g~~  280 (361)
                      +.+....+|+||.++|.+..+  -.+.++++..++++|..
T Consensus       202 L~~~~~~ADIVI~Avg~p~~I--~~~~vk~GavVIDVgi~  239 (301)
T 1a4i_A          202 LDEEVNKGDILVVATGQPEMV--KGEWIKPGAIVIDCGIN  239 (301)
T ss_dssp             HHHHHTTCSEEEECCCCTTCB--CGGGSCTTCEEEECCCB
T ss_pred             HHHHhccCCEEEECCCCcccC--CHHHcCCCcEEEEccCC
Confidence            334445789999999998733  34558899999999975

>3u5t_A 3-oxoacyl-[acyl-carrier-protein] reductase; structural genomics, PSI-biology, NEW YORK structural genomi research consortium, nysgrc; 2.40A {Sinorhizobium meliloti}

Probab=97.34  E-value=0.0015  Score=57.41  Aligned_cols=99  Identities=14%  Similarity=0.209  Sum_probs=66.0

Q ss_pred             CCCCEEEEEcC-ChHHHHHHHHHHHcCCeEEEEeC-CchhHHHHHH---HcCCCE---EecCCCHHHHHHh-------cC
Q 018067          182 KPGMHVGVVGL-GGLGHVAVKFAKAMGVKVTVIST-SPSKKSEAIE---RLGADS---FLVSRDQDEMQAA-------MG  246 (361)
Q Consensus       182 ~~g~~vlV~Ga-g~vG~~a~~la~~~g~~vi~~~~-~~~~~~~~~~---~~g~~~---vv~~~~~~~~~~~-------~~  246 (361)
                      ..++++||.|+ |++|.++++.+...|++|+++.+ ..+..+.+.+   ..+...   ..|..+++.+.++       .+
T Consensus        25 ~~~k~~lVTGas~GIG~aia~~la~~G~~Vv~~~~~~~~~~~~~~~~~~~~~~~~~~~~~Dl~~~~~v~~~~~~~~~~~g  104 (267)
T 3u5t_A           25 ETNKVAIVTGASRGIGAAIAARLASDGFTVVINYAGKAAAAEEVAGKIEAAGGKALTAQADVSDPAAVRRLFATAEEAFG  104 (267)
T ss_dssp             --CCEEEEESCSSHHHHHHHHHHHHHTCEEEEEESSCSHHHHHHHHHHHHTTCCEEEEECCTTCHHHHHHHHHHHHHHHS
T ss_pred             cCCCEEEEeCCCCHHHHHHHHHHHHCCCEEEEEcCCCHHHHHHHHHHHHhcCCeEEEEEcCCCCHHHHHHHHHHHHHHcC
Confidence            35789999997 99999999999999999998754 4444443333   334332   2355565544433       24


Q ss_pred             CccEEEEcCCCcc-------------------------cHHHHHhccccCCEEEEecCC
Q 018067          247 TMDGIIDTVSAVH-------------------------PLMPLIGLLKSQGKLVLVGAP  280 (361)
Q Consensus       247 g~d~vid~~g~~~-------------------------~~~~~~~~l~~~G~~v~~g~~  280 (361)
                      ++|++|+++|...                         ..+.++..++++|+++.+++.
T Consensus       105 ~iD~lvnnAG~~~~~~~~~~~~~~~~~~~~vN~~g~~~~~~~~~~~~~~~g~iv~isS~  163 (267)
T 3u5t_A          105 GVDVLVNNAGIMPLTTIAETGDAVFDRVIAVNLKGTFNTLREAAQRLRVGGRIINMSTS  163 (267)
T ss_dssp             CEEEEEECCCCCCCCCGGGCCHHHHHHHHHHHHHHHHHHHHHHHHHEEEEEEEEEECCT
T ss_pred             CCCEEEECCCCCCCCChhhCCHHHHHHHHHHHHHHHHHHHHHHHHHHhhCCeEEEEeCh
Confidence            8999999998521                         233455566778999999864

>3mb5_A SAM-dependent methyltransferase; RNA methyltransferase, M1A, TRMI, intermolecular contacts, R specificity, tetramer, disulfide bond; HET: SAM; 1.60A {Pyrococcus abyssi} PDB: 3lga_A* 3lhd_C*

Probab=97.34  E-value=0.0004  Score=60.44  Aligned_cols=98  Identities=19%  Similarity=0.185  Sum_probs=68.0

Q ss_pred             cCCCCCCCEEEEEcCChHHHHHHHHHHHc--CCeEEEEeCCchhHHHHHHH---cCCC--EEecCCCHHHHHHhc-CCcc
Q 018067          178 YGLDKPGMHVGVVGLGGLGHVAVKFAKAM--GVKVTVISTSPSKKSEAIER---LGAD--SFLVSRDQDEMQAAM-GTMD  249 (361)
Q Consensus       178 ~~~~~~g~~vlV~Gag~vG~~a~~la~~~--g~~vi~~~~~~~~~~~~~~~---~g~~--~vv~~~~~~~~~~~~-~g~d  249 (361)
                      ...++++++||-+|+|. |..+..+++..  +.+++.++.+++....+.+.   .|..  ..+...+..  .... +.+|
T Consensus        88 ~~~~~~~~~vldiG~G~-G~~~~~l~~~~~~~~~v~~~D~~~~~~~~a~~~~~~~~~~~~v~~~~~d~~--~~~~~~~~D  164 (255)
T 3mb5_A           88 YAGISPGDFIVEAGVGS-GALTLFLANIVGPEGRVVSYEIREDFAKLAWENIKWAGFDDRVTIKLKDIY--EGIEEENVD  164 (255)
T ss_dssp             HTTCCTTCEEEEECCTT-SHHHHHHHHHHCTTSEEEEECSCHHHHHHHHHHHHHHTCTTTEEEECSCGG--GCCCCCSEE
T ss_pred             hhCCCCCCEEEEecCCc-hHHHHHHHHHhCCCeEEEEEecCHHHHHHHHHHHHHcCCCCceEEEECchh--hccCCCCcC
Confidence            34578999999999986 88889999885  56999999887765444332   3532  122222211  1122 3599


Q ss_pred             EEEEcCCCc-ccHHHHHhccccCCEEEEec
Q 018067          250 GIIDTVSAV-HPLMPLIGLLKSQGKLVLVG  278 (361)
Q Consensus       250 ~vid~~g~~-~~~~~~~~~l~~~G~~v~~g  278 (361)
                      +|+-..... ..+..+.+.|+++|+++...
T Consensus       165 ~v~~~~~~~~~~l~~~~~~L~~gG~l~~~~  194 (255)
T 3mb5_A          165 HVILDLPQPERVVEHAAKALKPGGFFVAYT  194 (255)
T ss_dssp             EEEECSSCGGGGHHHHHHHEEEEEEEEEEE
T ss_pred             EEEECCCCHHHHHHHHHHHcCCCCEEEEEE
Confidence            998877664 35889999999999998874

>3ew7_A LMO0794 protein; Q8Y8U8_lismo, putative NAD-dependent epimerase/dehydratase, LMR162, NESG, structural genomics, PSI-2; 2.73A {Listeria monocytogenes}

Probab=97.34  E-value=0.0011  Score=55.94  Aligned_cols=91  Identities=22%  Similarity=0.319  Sum_probs=63.8

Q ss_pred             EEEEEcC-ChHHHHHHHHHHHcCCeEEEEeCCchhHHHHHHHcCCCEE-ecCCCHHHHHHhcCCccEEEEcCCCcc----
Q 018067          186 HVGVVGL-GGLGHVAVKFAKAMGVKVTVISTSPSKKSEAIERLGADSF-LVSRDQDEMQAAMGTMDGIIDTVSAVH----  259 (361)
Q Consensus       186 ~vlV~Ga-g~vG~~a~~la~~~g~~vi~~~~~~~~~~~~~~~~g~~~v-v~~~~~~~~~~~~~g~d~vid~~g~~~----  259 (361)
                      +|||+|+ |.+|..+++.+...|.+|++++++.++...+.  -+...+ .|..+++.  +...++|+||+++|...    
T Consensus         2 kvlVtGatG~iG~~l~~~L~~~g~~V~~~~R~~~~~~~~~--~~~~~~~~D~~d~~~--~~~~~~d~vi~~ag~~~~~~~   77 (221)
T 3ew7_A            2 KIGIIGATGRAGSRILEEAKNRGHEVTAIVRNAGKITQTH--KDINILQKDIFDLTL--SDLSDQNVVVDAYGISPDEAE   77 (221)
T ss_dssp             EEEEETTTSHHHHHHHHHHHHTTCEEEEEESCSHHHHHHC--SSSEEEECCGGGCCH--HHHTTCSEEEECCCSSTTTTT
T ss_pred             eEEEEcCCchhHHHHHHHHHhCCCEEEEEEcCchhhhhcc--CCCeEEeccccChhh--hhhcCCCEEEECCcCCccccc
Confidence            6899997 99999999999999999999999987655442  233322 23333333  44568999999998741    


Q ss_pred             ----cHHHHHhcccc--CCEEEEecCC
Q 018067          260 ----PLMPLIGLLKS--QGKLVLVGAP  280 (361)
Q Consensus       260 ----~~~~~~~~l~~--~G~~v~~g~~  280 (361)
                          .....++.++.  .++++.+++.
T Consensus        78 ~~~~~~~~l~~a~~~~~~~~~v~~SS~  104 (221)
T 3ew7_A           78 KHVTSLDHLISVLNGTVSPRLLVVGGA  104 (221)
T ss_dssp             SHHHHHHHHHHHHCSCCSSEEEEECCC
T ss_pred             hHHHHHHHHHHHHHhcCCceEEEEecc
Confidence                22445555654  4789988754

>4egf_A L-xylulose reductase; structural genomics, ssgcid, seattle structural genomics CEN infectious disease, oxidoreductase; 2.30A {Mycobacterium smegmatis}

Probab=97.34  E-value=0.00054  Score=60.21  Aligned_cols=75  Identities=19%  Similarity=0.292  Sum_probs=54.8

Q ss_pred             CCCEEEEEcC-ChHHHHHHHHHHHcCCeEEEEeCCchhHHHHHHH----cCCCE---EecCCCHHHHHH-------hcCC
Q 018067          183 PGMHVGVVGL-GGLGHVAVKFAKAMGVKVTVISTSPSKKSEAIER----LGADS---FLVSRDQDEMQA-------AMGT  247 (361)
Q Consensus       183 ~g~~vlV~Ga-g~vG~~a~~la~~~g~~vi~~~~~~~~~~~~~~~----~g~~~---vv~~~~~~~~~~-------~~~g  247 (361)
                      .|+++||.|+ |++|.++++.+...|++|++++++.++..++.++    .+...   ..|-.+++.+.+       ..++
T Consensus        19 ~~k~vlVTGas~gIG~aia~~l~~~G~~V~~~~r~~~~~~~~~~~l~~~~~~~~~~~~~Dv~~~~~v~~~~~~~~~~~g~   98 (266)
T 4egf_A           19 DGKRALITGATKGIGADIARAFAAAGARLVLSGRDVSELDAARRALGEQFGTDVHTVAIDLAEPDAPAELARRAAEAFGG   98 (266)
T ss_dssp             TTCEEEETTTTSHHHHHHHHHHHHTTCEEEEEESCHHHHHHHHHHHHHHHCCCEEEEECCTTSTTHHHHHHHHHHHHHTS
T ss_pred             CCCEEEEeCCCcHHHHHHHHHHHHCCCEEEEEeCCHHHHHHHHHHHHHhcCCcEEEEEecCCCHHHHHHHHHHHHHHcCC
Confidence            5788999987 9999999999999999999999998776655443    34332   234444433332       2258


Q ss_pred             ccEEEEcCCC
Q 018067          248 MDGIIDTVSA  257 (361)
Q Consensus       248 ~d~vid~~g~  257 (361)
                      +|++|+++|.
T Consensus        99 id~lv~nAg~  108 (266)
T 4egf_A           99 LDVLVNNAGI  108 (266)
T ss_dssp             CSEEEEECCC
T ss_pred             CCEEEECCCc
Confidence            9999999984

>1nff_A Putative oxidoreductase RV2002; directed evolution, GFP, SDR, hydroxysteroid dehydrogenase, structural genomics, PSI; HET: NAD; 1.80A {Mycobacterium tuberculosis} SCOP: c.2.1.2 PDB: 1nfq_A* 1nfr_A*

Probab=97.34  E-value=0.00087  Score=58.62  Aligned_cols=75  Identities=20%  Similarity=0.217  Sum_probs=56.7

Q ss_pred             CCCEEEEEcC-ChHHHHHHHHHHHcCCeEEEEeCCchhHHHHHHHcCCC---EEecCCCHHHHHHhc-------CCccEE
Q 018067          183 PGMHVGVVGL-GGLGHVAVKFAKAMGVKVTVISTSPSKKSEAIERLGAD---SFLVSRDQDEMQAAM-------GTMDGI  251 (361)
Q Consensus       183 ~g~~vlV~Ga-g~vG~~a~~la~~~g~~vi~~~~~~~~~~~~~~~~g~~---~vv~~~~~~~~~~~~-------~g~d~v  251 (361)
                      .++++||.|+ |++|..+++.+...|++|++++++.++...+.+++...   ...|..+++.+.++.       +++|++
T Consensus         6 ~~k~vlVTGas~gIG~~ia~~l~~~G~~V~~~~r~~~~~~~~~~~~~~~~~~~~~D~~~~~~v~~~~~~~~~~~g~iD~l   85 (260)
T 1nff_A            6 TGKVALVSGGARGMGASHVRAMVAEGAKVVFGDILDEEGKAMAAELADAARYVHLDVTQPAQWKAAVDTAVTAFGGLHVL   85 (260)
T ss_dssp             TTCEEEEETTTSHHHHHHHHHHHHTTCEEEEEESCHHHHHHHHHHTGGGEEEEECCTTCHHHHHHHHHHHHHHHSCCCEE
T ss_pred             CCCEEEEeCCCCHHHHHHHHHHHHCCCEEEEEeCCHHHHHHHHHHhhcCceEEEecCCCHHHHHHHHHHHHHHcCCCCEE
Confidence            4788999997 99999999999999999999999987776665555422   123555655444332       489999


Q ss_pred             EEcCCC
Q 018067          252 IDTVSA  257 (361)
Q Consensus       252 id~~g~  257 (361)
                      |+++|.
T Consensus        86 v~~Ag~   91 (260)
T 1nff_A           86 VNNAGI   91 (260)
T ss_dssp             EECCCC
T ss_pred             EECCCC
Confidence            999984

>4imr_A 3-oxoacyl-(acyl-carrier-protein) reductase; oxidoreductase, nicotinamide adenine dinucleotide phosphate, structural genomics; HET: NAP; 1.96A {Agrobacterium fabrum}

Probab=97.33  E-value=0.0015  Score=57.70  Aligned_cols=75  Identities=17%  Similarity=0.216  Sum_probs=54.1

Q ss_pred             CCCEEEEEcC-ChHHHHHHHHHHHcCCeEEEEeCCchhHHHHHHHc---CCCE---EecCCCHHHHHHh------cCCcc
Q 018067          183 PGMHVGVVGL-GGLGHVAVKFAKAMGVKVTVISTSPSKKSEAIERL---GADS---FLVSRDQDEMQAA------MGTMD  249 (361)
Q Consensus       183 ~g~~vlV~Ga-g~vG~~a~~la~~~g~~vi~~~~~~~~~~~~~~~~---g~~~---vv~~~~~~~~~~~------~~g~d  249 (361)
                      .|+++||.|+ +++|.++++.+...|++|++++++.++...+.+++   +...   ..|..+.+.+..+      .+++|
T Consensus        32 ~gk~~lVTGas~GIG~aia~~la~~G~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~Dv~~~~~~~~~~~~~~~~g~iD  111 (275)
T 4imr_A           32 RGRTALVTGSSRGIGAAIAEGLAGAGAHVILHGVKPGSTAAVQQRIIASGGTAQELAGDLSEAGAGTDLIERAEAIAPVD  111 (275)
T ss_dssp             TTCEEEETTCSSHHHHHHHHHHHHTTCEEEEEESSTTTTHHHHHHHHHTTCCEEEEECCTTSTTHHHHHHHHHHHHSCCC
T ss_pred             CCCEEEEECCCCHHHHHHHHHHHHCCCEEEEEcCCHHHHHHHHHHHHhcCCeEEEEEecCCCHHHHHHHHHHHHHhCCCC
Confidence            5789999987 99999999999999999999999887766654443   4332   1233443222221      15899


Q ss_pred             EEEEcCCC
Q 018067          250 GIIDTVSA  257 (361)
Q Consensus       250 ~vid~~g~  257 (361)
                      ++|+++|.
T Consensus       112 ~lvnnAg~  119 (275)
T 4imr_A          112 ILVINASA  119 (275)
T ss_dssp             EEEECCCC
T ss_pred             EEEECCCC
Confidence            99999984

>4a26_A Putative C-1-tetrahydrofolate synthase, cytoplasm; oxidoreductase, hydrolase, leishmaniasis; 2.70A {Leishmania major}

Probab=97.33  E-value=0.0013  Score=58.14  Aligned_cols=98  Identities=19%  Similarity=0.216  Sum_probs=74.5

Q ss_pred             cccchhhhhhhhHhhhcCCCCCCCEEEEEcCC-hHHHHHHHHHHHcCCeEEEEeCCchhHHHHHHHcCCCEEecCCCHHH
Q 018067          162 APLLCAGITVYSPLRFYGLDKPGMHVGVVGLG-GLGHVAVKFAKAMGVKVTVISTSPSKKSEAIERLGADSFLVSRDQDE  240 (361)
Q Consensus       162 a~l~~~~~ta~~~l~~~~~~~~g~~vlV~Gag-~vG~~a~~la~~~g~~vi~~~~~~~~~~~~~~~~g~~~vv~~~~~~~  240 (361)
                      ..+||+...+...+++...--.|++++|+|.| .+|..++.++...|++|+++.+......                   
T Consensus       143 ~~~PcTp~gv~~lL~~~~i~l~Gk~vvVIG~s~iVG~p~A~lL~~~gAtVtv~~~~T~~l~-------------------  203 (300)
T 4a26_A          143 PFTPCTAKGVIVLLKRCGIEMAGKRAVVLGRSNIVGAPVAALLMKENATVTIVHSGTSTED-------------------  203 (300)
T ss_dssp             SCCCHHHHHHHHHHHHHTCCCTTCEEEEECCCTTTHHHHHHHHHHTTCEEEEECTTSCHHH-------------------
T ss_pred             CCCCCCHHHHHHHHHHcCCCCCCCEEEEECCCchHHHHHHHHHHHCCCeEEEEeCCCCCch-------------------
Confidence            35677777888888887755689999999985 5899999999999999998876432221                   


Q ss_pred             HHHhcCCccEEEEcCCCcccHHHHHhccccCCEEEEecCC
Q 018067          241 MQAAMGTMDGIIDTVSAVHPLMPLIGLLKSQGKLVLVGAP  280 (361)
Q Consensus       241 ~~~~~~g~d~vid~~g~~~~~~~~~~~l~~~G~~v~~g~~  280 (361)
                      +.+....+|+||.++|.+..+.  -+.++++..++++|..
T Consensus       204 l~~~~~~ADIVI~Avg~p~~I~--~~~vk~GavVIDvgi~  241 (300)
T 4a26_A          204 MIDYLRTADIVIAAMGQPGYVK--GEWIKEGAAVVDVGTT  241 (300)
T ss_dssp             HHHHHHTCSEEEECSCCTTCBC--GGGSCTTCEEEECCCE
T ss_pred             hhhhhccCCEEEECCCCCCCCc--HHhcCCCcEEEEEecc
Confidence            0133446899999999876443  3567999999999864

>2c07_A 3-oxoacyl-(acyl-carrier protein) reductase; oxidoreductase, FABG, short-chain alcohol reductase, fatty acid biosynthesis, apicoplast; 1.5A {Plasmodium falciparum} SCOP: c.2.1.2

Probab=97.33  E-value=0.0021  Score=56.87  Aligned_cols=75  Identities=16%  Similarity=0.227  Sum_probs=54.5

Q ss_pred             CCCEEEEEcC-ChHHHHHHHHHHHcCCeEEEEeCCchhHHHHHHHc---CCCE---EecCCCHHHHHHhc-------CCc
Q 018067          183 PGMHVGVVGL-GGLGHVAVKFAKAMGVKVTVISTSPSKKSEAIERL---GADS---FLVSRDQDEMQAAM-------GTM  248 (361)
Q Consensus       183 ~g~~vlV~Ga-g~vG~~a~~la~~~g~~vi~~~~~~~~~~~~~~~~---g~~~---vv~~~~~~~~~~~~-------~g~  248 (361)
                      .++++||.|+ |++|..++..+...|++|+++.++.++...+.+++   +...   ..|..+.+.+.++.       +++
T Consensus        43 ~~k~vlITGasggIG~~la~~L~~~G~~V~~~~r~~~~~~~~~~~l~~~~~~~~~~~~Dl~d~~~v~~~~~~~~~~~~~i  122 (285)
T 2c07_A           43 ENKVALVTGAGRGIGREIAKMLAKSVSHVICISRTQKSCDSVVDEIKSFGYESSGYAGDVSKKEEISEVINKILTEHKNV  122 (285)
T ss_dssp             SSCEEEEESTTSHHHHHHHHHHTTTSSEEEEEESSHHHHHHHHHHHHTTTCCEEEEECCTTCHHHHHHHHHHHHHHCSCC
T ss_pred             CCCEEEEECCCcHHHHHHHHHHHHcCCEEEEEcCCHHHHHHHHHHHHhcCCceeEEECCCCCHHHHHHHHHHHHHhcCCC
Confidence            4678999997 99999999999889999999888776655554443   4332   23555555444332       479


Q ss_pred             cEEEEcCCC
Q 018067          249 DGIIDTVSA  257 (361)
Q Consensus       249 d~vid~~g~  257 (361)
                      |++|+++|.
T Consensus       123 d~li~~Ag~  131 (285)
T 2c07_A          123 DILVNNAGI  131 (285)
T ss_dssp             CEEEECCCC
T ss_pred             CEEEECCCC
Confidence            999999985

>1gee_A Glucose 1-dehydrogenase; short-chain dehydrogenase/reductase, oxidoreductase; HET: NAD; 1.60A {Bacillus megaterium} SCOP: c.2.1.2 PDB: 1rwb_A* 1gco_A* 1g6k_A* 3aus_A 3aut_A* 3auu_A*

Probab=97.32  E-value=0.0017  Score=56.51  Aligned_cols=75  Identities=19%  Similarity=0.234  Sum_probs=52.8

Q ss_pred             CCCEEEEEcC-ChHHHHHHHHHHHcCCeEEEEeC-CchhHHHHHHHc---CCCE---EecCCCHHHHHHhc-------CC
Q 018067          183 PGMHVGVVGL-GGLGHVAVKFAKAMGVKVTVIST-SPSKKSEAIERL---GADS---FLVSRDQDEMQAAM-------GT  247 (361)
Q Consensus       183 ~g~~vlV~Ga-g~vG~~a~~la~~~g~~vi~~~~-~~~~~~~~~~~~---g~~~---vv~~~~~~~~~~~~-------~g  247 (361)
                      .++++||.|+ |.+|..++..+...|++|+++++ +.++...+.+++   +...   ..|..+++.+.++.       ++
T Consensus         6 ~~k~vlITGasggiG~~~a~~l~~~G~~V~~~~r~~~~~~~~~~~~l~~~~~~~~~~~~D~~~~~~~~~~~~~~~~~~g~   85 (261)
T 1gee_A            6 EGKVVVITGSSTGLGKSMAIRFATEKAKVVVNYRSKEDEANSVLEEIKKVGGEAIAVKGDVTVESDVINLVQSAIKEFGK   85 (261)
T ss_dssp             TTCEEEETTCSSHHHHHHHHHHHHTTCEEEEEESSCHHHHHHHHHHHHHTTCEEEEEECCTTSHHHHHHHHHHHHHHHSC
T ss_pred             CCCEEEEeCCCChHHHHHHHHHHHCCCEEEEEcCCChHHHHHHHHHHHhcCCceEEEECCCCCHHHHHHHHHHHHHHcCC
Confidence            4678999997 99999999999999999999998 655544443332   4321   22455554433322       47


Q ss_pred             ccEEEEcCCC
Q 018067          248 MDGIIDTVSA  257 (361)
Q Consensus       248 ~d~vid~~g~  257 (361)
                      +|++|+++|.
T Consensus        86 id~li~~Ag~   95 (261)
T 1gee_A           86 LDVMINNAGL   95 (261)
T ss_dssp             CCEEEECCCC
T ss_pred             CCEEEECCCC
Confidence            9999999984

>1g0o_A Trihydroxynaphthalene reductase; protein-NADPH-active site inhibitor complex, dinucleotide binding fold, oxidoreductase; HET: NDP PYQ; 1.70A {Magnaporthe grisea} SCOP: c.2.1.2 PDB: 1doh_A* 1g0n_A* 1ybv_A*

Probab=97.32  E-value=0.0024  Score=56.42  Aligned_cols=98  Identities=21%  Similarity=0.264  Sum_probs=66.6

Q ss_pred             CCCEEEEEcC-ChHHHHHHHHHHHcCCeEEEEeCCchhH-HHH---HHHcCCCE---EecCCCHHHHHHh-------cCC
Q 018067          183 PGMHVGVVGL-GGLGHVAVKFAKAMGVKVTVISTSPSKK-SEA---IERLGADS---FLVSRDQDEMQAA-------MGT  247 (361)
Q Consensus       183 ~g~~vlV~Ga-g~vG~~a~~la~~~g~~vi~~~~~~~~~-~~~---~~~~g~~~---vv~~~~~~~~~~~-------~~g  247 (361)
                      .++++||.|+ |++|.++++.+...|++|++++++.++. ..+   .++.|.+.   ..|..+.+.+..+       .++
T Consensus        28 ~~k~vlVTGas~gIG~~ia~~l~~~G~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~D~~~~~~~~~~~~~~~~~~g~  107 (283)
T 1g0o_A           28 EGKVALVTGAGRGIGREMAMELGRRGCKVIVNYANSTESAEEVVAAIKKNGSDAACVKANVGVVEDIVRMFEEAVKIFGK  107 (283)
T ss_dssp             TTCEEEETTTTSHHHHHHHHHHHHTTCEEEEEESSCHHHHHHHHHHHHHTTCCEEEEECCTTCHHHHHHHHHHHHHHHSC
T ss_pred             CCCEEEEeCCCcHHHHHHHHHHHHCCCEEEEEeCCchHHHHHHHHHHHHhCCCeEEEEcCCCCHHHHHHHHHHHHHHcCC
Confidence            5788999997 9999999999999999999999886542 222   23345432   2344554433322       257


Q ss_pred             ccEEEEcCCCcc-------------------------cHHHHHhccccCCEEEEecCC
Q 018067          248 MDGIIDTVSAVH-------------------------PLMPLIGLLKSQGKLVLVGAP  280 (361)
Q Consensus       248 ~d~vid~~g~~~-------------------------~~~~~~~~l~~~G~~v~~g~~  280 (361)
                      +|++|+++|...                         ..+.++..++.+|+++.+++.
T Consensus       108 iD~lv~~Ag~~~~~~~~~~~~~~~~~~~~~N~~g~~~l~~~~~~~~~~~g~iv~isS~  165 (283)
T 1g0o_A          108 LDIVCSNSGVVSFGHVKDVTPEEFDRVFTINTRGQFFVAREAYKHLEIGGRLILMGSI  165 (283)
T ss_dssp             CCEEEECCCCCCCCCGGGCCHHHHHHHHHHHTHHHHHHHHHHHHHSCTTCEEEEECCG
T ss_pred             CCEEEECCCcCCCCCcccCCHHHHHHHHHHhhHHHHHHHHHHHHHHhcCCeEEEEech
Confidence            999999998531                         123445555677999999864

>3rd5_A Mypaa.01249.C; ssgcid, structural genomics, seattle structural genomics CEN infectious disease, oxidoreductase; HET: EPE; 1.50A {Mycobacterium paratuberculosis}

Probab=97.32  E-value=0.00071  Score=60.20  Aligned_cols=76  Identities=18%  Similarity=0.199  Sum_probs=59.9

Q ss_pred             CCCCEEEEEcC-ChHHHHHHHHHHHcCCeEEEEeCCchhHHHHHHHcCCCE---EecCCCHHHHHHhc---CCccEEEEc
Q 018067          182 KPGMHVGVVGL-GGLGHVAVKFAKAMGVKVTVISTSPSKKSEAIERLGADS---FLVSRDQDEMQAAM---GTMDGIIDT  254 (361)
Q Consensus       182 ~~g~~vlV~Ga-g~vG~~a~~la~~~g~~vi~~~~~~~~~~~~~~~~g~~~---vv~~~~~~~~~~~~---~g~d~vid~  254 (361)
                      -.|+++||.|+ |++|.++++.+...|++|++++++.++...+.++++...   ..|..+.+.+.++.   +++|++|++
T Consensus        14 l~gk~vlVTGas~gIG~~~a~~L~~~G~~V~~~~r~~~~~~~~~~~~~~~~~~~~~Dl~d~~~v~~~~~~~~~iD~lv~n   93 (291)
T 3rd5_A           14 FAQRTVVITGANSGLGAVTARELARRGATVIMAVRDTRKGEAAARTMAGQVEVRELDLQDLSSVRRFADGVSGADVLINN   93 (291)
T ss_dssp             CTTCEEEEECCSSHHHHHHHHHHHHTTCEEEEEESCHHHHHHHHTTSSSEEEEEECCTTCHHHHHHHHHTCCCEEEEEEC
T ss_pred             CCCCEEEEeCCCChHHHHHHHHHHHCCCEEEEEECCHHHHHHHHHHhcCCeeEEEcCCCCHHHHHHHHHhcCCCCEEEEC
Confidence            36789999997 999999999999999999999999988877776665432   23555666555543   478999999


Q ss_pred             CCC
Q 018067          255 VSA  257 (361)
Q Consensus       255 ~g~  257 (361)
                      +|.
T Consensus        94 Ag~   96 (291)
T 3rd5_A           94 AGI   96 (291)
T ss_dssp             CCC
T ss_pred             CcC
Confidence            984

>1ae1_A Tropinone reductase-I; oxidoreductase, tropane alkaloid biosynthesis, reduction of tropinone to tropine, short-chain dehydrogenase; HET: NAP; 2.40A {Datura stramonium} SCOP: c.2.1.2

Probab=97.32  E-value=0.0014  Score=57.65  Aligned_cols=75  Identities=19%  Similarity=0.265  Sum_probs=55.5

Q ss_pred             CCCEEEEEcC-ChHHHHHHHHHHHcCCeEEEEeCCchhHHHHHHHc---CCCE---EecCCCHHHHHHh-------c-CC
Q 018067          183 PGMHVGVVGL-GGLGHVAVKFAKAMGVKVTVISTSPSKKSEAIERL---GADS---FLVSRDQDEMQAA-------M-GT  247 (361)
Q Consensus       183 ~g~~vlV~Ga-g~vG~~a~~la~~~g~~vi~~~~~~~~~~~~~~~~---g~~~---vv~~~~~~~~~~~-------~-~g  247 (361)
                      .++++||.|+ |++|.++++.+...|++|++++++.++...+.+++   +...   ..|..+++.+..+       . ++
T Consensus        20 ~~k~vlVTGas~gIG~aia~~l~~~G~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~D~~~~~~~~~~~~~~~~~~~g~   99 (273)
T 1ae1_A           20 KGTTALVTGGSKGIGYAIVEELAGLGARVYTCSRNEKELDECLEIWREKGLNVEGSVCDLLSRTERDKLMQTVAHVFDGK   99 (273)
T ss_dssp             TTCEEEEESCSSHHHHHHHHHHHHTTCEEEEEESCHHHHHHHHHHHHHTTCCEEEEECCTTCHHHHHHHHHHHHHHTTSC
T ss_pred             CCCEEEEECCcchHHHHHHHHHHHCCCEEEEEeCCHHHHHHHHHHHHhcCCceEEEECCCCCHHHHHHHHHHHHHHcCCC
Confidence            5788999997 99999999999999999999999887665554433   4332   2355555444332       2 67


Q ss_pred             ccEEEEcCCC
Q 018067          248 MDGIIDTVSA  257 (361)
Q Consensus       248 ~d~vid~~g~  257 (361)
                      +|++|+++|.
T Consensus       100 id~lv~nAg~  109 (273)
T 1ae1_A          100 LNILVNNAGV  109 (273)
T ss_dssp             CCEEEECCCC
T ss_pred             CcEEEECCCC
Confidence            9999999985

>3ioy_A Short-chain dehydrogenase/reductase SDR; structural genomics, oxidoreductase, PSI-2, protein structure initiative; 1.90A {Novosphingobium aromaticivorans DSM12444}

Probab=97.31  E-value=0.00095  Score=60.34  Aligned_cols=75  Identities=20%  Similarity=0.285  Sum_probs=55.8

Q ss_pred             CCCEEEEEcC-ChHHHHHHHHHHHcCCeEEEEeCCchhHHHHHHHc---CC--C---EEecCCCHHHHHHh-------cC
Q 018067          183 PGMHVGVVGL-GGLGHVAVKFAKAMGVKVTVISTSPSKKSEAIERL---GA--D---SFLVSRDQDEMQAA-------MG  246 (361)
Q Consensus       183 ~g~~vlV~Ga-g~vG~~a~~la~~~g~~vi~~~~~~~~~~~~~~~~---g~--~---~vv~~~~~~~~~~~-------~~  246 (361)
                      .+++|||.|+ |+||..++..+...|++|++++++.++...+.+.+   +.  .   ...|..+++.+.++       .+
T Consensus         7 ~~k~vlVTGas~gIG~~la~~l~~~G~~Vv~~~r~~~~~~~~~~~l~~~~~~~~~~~~~~Dl~~~~~v~~~~~~~~~~~g   86 (319)
T 3ioy_A            7 AGRTAFVTGGANGVGIGLVRQLLNQGCKVAIADIRQDSIDKALATLEAEGSGPEVMGVQLDVASREGFKMAADEVEARFG   86 (319)
T ss_dssp             TTCEEEEETTTSTHHHHHHHHHHHTTCEEEEEESCHHHHHHHHHHHHHHTCGGGEEEEECCTTCHHHHHHHHHHHHHHTC
T ss_pred             CCCEEEEcCCchHHHHHHHHHHHHCCCEEEEEECCHHHHHHHHHHHHhcCCCCeEEEEECCCCCHHHHHHHHHHHHHhCC
Confidence            5789999998 99999999999999999999999988766655443   22  2   12355555443332       25


Q ss_pred             CccEEEEcCCC
Q 018067          247 TMDGIIDTVSA  257 (361)
Q Consensus       247 g~d~vid~~g~  257 (361)
                      ++|++|+++|.
T Consensus        87 ~id~lv~nAg~   97 (319)
T 3ioy_A           87 PVSILCNNAGV   97 (319)
T ss_dssp             CEEEEEECCCC
T ss_pred             CCCEEEECCCc
Confidence            79999999984

>3ak4_A NADH-dependent quinuclidinone reductase; SDR, (R)-3-quinuclidinol, chiral alcohol, oxidoreductase; HET: NAD; 2.00A {Agrobacterium tumefaciens}

Probab=97.30  E-value=0.0012  Score=57.84  Aligned_cols=75  Identities=17%  Similarity=0.202  Sum_probs=56.6

Q ss_pred             CCCEEEEEcC-ChHHHHHHHHHHHcCCeEEEEeCCchhHHHHHHHcCC--C-EEecCCCHHHHHHhc-------CCccEE
Q 018067          183 PGMHVGVVGL-GGLGHVAVKFAKAMGVKVTVISTSPSKKSEAIERLGA--D-SFLVSRDQDEMQAAM-------GTMDGI  251 (361)
Q Consensus       183 ~g~~vlV~Ga-g~vG~~a~~la~~~g~~vi~~~~~~~~~~~~~~~~g~--~-~vv~~~~~~~~~~~~-------~g~d~v  251 (361)
                      .++++||.|+ |++|..++..+...|++|++++++.++...+.+++..  . ...|..+++.+.++.       +++|++
T Consensus        11 ~~k~vlVTGas~gIG~~ia~~l~~~G~~V~~~~r~~~~~~~~~~~~~~~~~~~~~D~~d~~~v~~~~~~~~~~~g~iD~l   90 (263)
T 3ak4_A           11 SGRKAIVTGGSKGIGAAIARALDKAGATVAIADLDVMAAQAVVAGLENGGFAVEVDVTKRASVDAAMQKAIDALGGFDLL   90 (263)
T ss_dssp             TTCEEEEETTTSHHHHHHHHHHHHTTCEEEEEESCHHHHHHHHHTCTTCCEEEECCTTCHHHHHHHHHHHHHHHTCCCEE
T ss_pred             CCCEEEEeCCCChHHHHHHHHHHHCCCEEEEEeCCHHHHHHHHHHHhcCCeEEEEeCCCHHHHHHHHHHHHHHcCCCCEE
Confidence            5788999997 9999999999999999999999998777666555532  2 123555655444332       479999


Q ss_pred             EEcCCC
Q 018067          252 IDTVSA  257 (361)
Q Consensus       252 id~~g~  257 (361)
                      |+++|.
T Consensus        91 v~~Ag~   96 (263)
T 3ak4_A           91 CANAGV   96 (263)
T ss_dssp             EECCCC
T ss_pred             EECCCc
Confidence            999984

>3tpc_A Short chain alcohol dehydrogenase-related dehydro; structural genomics, PSI-biology, NEW YORK structural genomi research consortium; 2.34A {Sinorhizobium meliloti}

Probab=97.30  E-value=0.00067  Score=59.19  Aligned_cols=75  Identities=21%  Similarity=0.334  Sum_probs=49.8

Q ss_pred             CCCEEEEEcC-ChHHHHHHHHHHHcCCeEEEEeCCchhHHHHHHHcCCCE---EecCCCHHHHHHh-------cCCccEE
Q 018067          183 PGMHVGVVGL-GGLGHVAVKFAKAMGVKVTVISTSPSKKSEAIERLGADS---FLVSRDQDEMQAA-------MGTMDGI  251 (361)
Q Consensus       183 ~g~~vlV~Ga-g~vG~~a~~la~~~g~~vi~~~~~~~~~~~~~~~~g~~~---vv~~~~~~~~~~~-------~~g~d~v  251 (361)
                      .++++||.|+ |++|.++++.+...|++|++++++.++.++..++++...   ..|-.+++.+.++       .+++|++
T Consensus         6 ~~k~~lVTGas~gIG~aia~~l~~~G~~V~~~~r~~~~~~~~~~~~~~~~~~~~~Dv~~~~~v~~~~~~~~~~~g~id~l   85 (257)
T 3tpc_A            6 KSRVFIVTGASSGLGAAVTRMLAQEGATVLGLDLKPPAGEEPAAELGAAVRFRNADVTNEADATAALAFAKQEFGHVHGL   85 (257)
T ss_dssp             TTCEEEEESTTSHHHHHHHHHHHHTTCEEEEEESSCC------------CEEEECCTTCHHHHHHHHHHHHHHHSCCCEE
T ss_pred             CCCEEEEeCCCCHHHHHHHHHHHHCCCEEEEEeCChHHHHHHHHHhCCceEEEEccCCCHHHHHHHHHHHHHHcCCCCEE
Confidence            5788999997 999999999999999999999999887777766665421   2355555443332       2489999


Q ss_pred             EEcCCC
Q 018067          252 IDTVSA  257 (361)
Q Consensus       252 id~~g~  257 (361)
                      |+++|.
T Consensus        86 v~nAg~   91 (257)
T 3tpc_A           86 VNCAGT   91 (257)
T ss_dssp             EECCCC
T ss_pred             EECCCC
Confidence            999985

>2ae2_A Protein (tropinone reductase-II); oxidoreductase, tropane alkaloid biosynthesis, reduction of tropinone to pseudotropine; HET: NAP PTO; 1.90A {Datura stramonium} SCOP: c.2.1.2 PDB: 2ae1_A* 1ipe_A* 1ipf_A*

Probab=97.30  E-value=0.0016  Score=56.89  Aligned_cols=75  Identities=19%  Similarity=0.257  Sum_probs=55.4

Q ss_pred             CCCEEEEEcC-ChHHHHHHHHHHHcCCeEEEEeCCchhHHHHHHHc---CCCE---EecCCCHHHHHHhc--------CC
Q 018067          183 PGMHVGVVGL-GGLGHVAVKFAKAMGVKVTVISTSPSKKSEAIERL---GADS---FLVSRDQDEMQAAM--------GT  247 (361)
Q Consensus       183 ~g~~vlV~Ga-g~vG~~a~~la~~~g~~vi~~~~~~~~~~~~~~~~---g~~~---vv~~~~~~~~~~~~--------~g  247 (361)
                      .++++||.|+ |++|.++++.+...|++|++++++.++...+.+++   +...   ..|..+++.+.++.        ++
T Consensus         8 ~~k~vlVTGas~giG~~ia~~l~~~G~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~D~~~~~~~~~~~~~~~~~~~g~   87 (260)
T 2ae2_A            8 EGCTALVTGGSRGIGYGIVEELASLGASVYTCSRNQKELNDCLTQWRSKGFKVEASVCDLSSRSERQELMNTVANHFHGK   87 (260)
T ss_dssp             TTCEEEEESCSSHHHHHHHHHHHHTTCEEEEEESCHHHHHHHHHHHHHTTCEEEEEECCTTCHHHHHHHHHHHHHHTTTC
T ss_pred             CCCEEEEECCCcHHHHHHHHHHHHCCCEEEEEeCCHHHHHHHHHHHHhcCCcEEEEEcCCCCHHHHHHHHHHHHHHcCCC
Confidence            5788999997 99999999999999999999999887665554433   4321   23555654444332        57


Q ss_pred             ccEEEEcCCC
Q 018067          248 MDGIIDTVSA  257 (361)
Q Consensus       248 ~d~vid~~g~  257 (361)
                      +|++|+++|.
T Consensus        88 id~lv~~Ag~   97 (260)
T 2ae2_A           88 LNILVNNAGI   97 (260)
T ss_dssp             CCEEEECCCC
T ss_pred             CCEEEECCCC
Confidence            9999999984

>3l77_A Short-chain alcohol dehydrogenase; oxidoreductase; HET: NJP PG4; 1.60A {Thermococcus sibiricus} SCOP: c.2.1.0 PDB: 3tn7_A*

Probab=97.30  E-value=0.002  Score=55.15  Aligned_cols=75  Identities=13%  Similarity=0.206  Sum_probs=56.9

Q ss_pred             CCCEEEEEcC-ChHHHHHHHHHHHcCCeEEEEeCCchhHHHHHHHc----CCCE---EecCCCHHHHHHhc-------CC
Q 018067          183 PGMHVGVVGL-GGLGHVAVKFAKAMGVKVTVISTSPSKKSEAIERL----GADS---FLVSRDQDEMQAAM-------GT  247 (361)
Q Consensus       183 ~g~~vlV~Ga-g~vG~~a~~la~~~g~~vi~~~~~~~~~~~~~~~~----g~~~---vv~~~~~~~~~~~~-------~g  247 (361)
                      +++++||.|+ |++|...++.+...|++|++++++.++...+.+++    +...   ..|-.+++.+.++.       ++
T Consensus         1 ~~k~vlITGas~gIG~~ia~~l~~~G~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~D~~~~~~v~~~~~~~~~~~g~   80 (235)
T 3l77_A            1 EMKVAVITGASRGIGEAIARALARDGYALALGARSVDRLEKIAHELMQEQGVEVFYHHLDVSKAESVEEFSKKVLERFGD   80 (235)
T ss_dssp             CCCEEEEESCSSHHHHHHHHHHHHTTCEEEEEESCHHHHHHHHHHHHHHHCCCEEEEECCTTCHHHHHHHCC-HHHHHSS
T ss_pred             CCCEEEEECCCcHHHHHHHHHHHHCCCEEEEEeCCHHHHHHHHHHHHhhcCCeEEEEEeccCCHHHHHHHHHHHHHhcCC
Confidence            3678999997 99999999999999999999999987766654433    4332   23566666555543       37


Q ss_pred             ccEEEEcCCC
Q 018067          248 MDGIIDTVSA  257 (361)
Q Consensus       248 ~d~vid~~g~  257 (361)
                      +|++|+++|.
T Consensus        81 id~li~~Ag~   90 (235)
T 3l77_A           81 VDVVVANAGL   90 (235)
T ss_dssp             CSEEEECCCC
T ss_pred             CCEEEECCcc
Confidence            9999999985

>3ngx_A Bifunctional protein fold; methylenetetrahydrofolate dehydrogenase/cyclohydrolase; 2.30A {Thermoplasma acidophilum} PDB: 3ngl_A

Probab=97.30  E-value=0.0016  Score=56.92  Aligned_cols=95  Identities=13%  Similarity=0.082  Sum_probs=73.3

Q ss_pred             cccchhhhhhhhHhhhcCCCCCCCEEEEEcCC-hHHHHHHHHHHHcCCeEEEEeCCchhHHHHHHHcCCCEEecCCCHHH
Q 018067          162 APLLCAGITVYSPLRFYGLDKPGMHVGVVGLG-GLGHVAVKFAKAMGVKVTVISTSPSKKSEAIERLGADSFLVSRDQDE  240 (361)
Q Consensus       162 a~l~~~~~ta~~~l~~~~~~~~g~~vlV~Gag-~vG~~a~~la~~~g~~vi~~~~~~~~~~~~~~~~g~~~vv~~~~~~~  240 (361)
                      ..+||+...+...+++..  -.|++++|+|.| .+|..++.++...|++|+++.+..+...                   
T Consensus       130 ~~~PcTp~gv~~lL~~~~--l~Gk~vvVvG~s~iVG~plA~lL~~~gAtVtv~~~~t~~L~-------------------  188 (276)
T 3ngx_A          130 FLVPATPRAVIDIMDYYG--YHENTVTIVNRSPVVGRPLSMMLLNRNYTVSVCHSKTKDIG-------------------  188 (276)
T ss_dssp             SSCCHHHHHHHHHHHHHT--CCSCEEEEECCCTTTHHHHHHHHHHTTCEEEEECTTCSCHH-------------------
T ss_pred             CCCCCcHHHHHHHHHHhC--cCCCEEEEEcCChHHHHHHHHHHHHCCCeEEEEeCCcccHH-------------------
Confidence            456777788888888877  689999999985 6999999999999999998876432222                   


Q ss_pred             HHHhcCCccEEEEcCCCcccHHHHHhccccCCEEEEecCCC
Q 018067          241 MQAAMGTMDGIIDTVSAVHPLMPLIGLLKSQGKLVLVGAPE  281 (361)
Q Consensus       241 ~~~~~~g~d~vid~~g~~~~~~~~~~~l~~~G~~v~~g~~~  281 (361)
                        +....+|++|.++|.+..+.  -+.++++..++++|...
T Consensus       189 --~~~~~ADIVI~Avg~p~~I~--~~~vk~GavVIDvgi~~  225 (276)
T 3ngx_A          189 --SMTRSSKIVVVAVGRPGFLN--REMVTPGSVVIDVGINY  225 (276)
T ss_dssp             --HHHHHSSEEEECSSCTTCBC--GGGCCTTCEEEECCCEE
T ss_pred             --HhhccCCEEEECCCCCcccc--HhhccCCcEEEEeccCc
Confidence              22335799999999876443  35679999999998753

>1b0a_A Protein (fold bifunctional protein); folate, dehydrogenase, cyclcohydrolase, channeling, oxidoreductase,hydrolase; 2.56A {Escherichia coli K12} SCOP: c.2.1.7 c.58.1.2

Probab=97.30  E-value=0.0012  Score=58.03  Aligned_cols=96  Identities=18%  Similarity=0.145  Sum_probs=73.8

Q ss_pred             cccchhhhhhhhHhhhcCCCCCCCEEEEEcCC-hHHHHHHHHHHHcCCeEEEEeCCchhHHHHHHHcCCCEEecCCCHHH
Q 018067          162 APLLCAGITVYSPLRFYGLDKPGMHVGVVGLG-GLGHVAVKFAKAMGVKVTVISTSPSKKSEAIERLGADSFLVSRDQDE  240 (361)
Q Consensus       162 a~l~~~~~ta~~~l~~~~~~~~g~~vlV~Gag-~vG~~a~~la~~~g~~vi~~~~~~~~~~~~~~~~g~~~vv~~~~~~~  240 (361)
                      ..+||+.......+++...--.|++++|+|.| .+|.-+++++...|++|+++.+..+...+.                 
T Consensus       137 ~~~PcTp~gi~~ll~~~~i~l~gk~vvVIG~s~iVG~p~A~lL~~~gAtVtv~hs~t~~L~~~-----------------  199 (288)
T 1b0a_A          137 RLRPCTPRGIVTLLERYNIDTFGLNAVVIGASNIVGRPMSMELLLAGCTTTVTHRFTKNLRHH-----------------  199 (288)
T ss_dssp             SSCCHHHHHHHHHHHHTTCCCTTCEEEEECCCTTTHHHHHHHHHTTTCEEEEECSSCSCHHHH-----------------
T ss_pred             CCCCCcHHHHHHHHHHcCCCCCCCEEEEECCChHHHHHHHHHHHHCCCeEEEEeCCchhHHHH-----------------
Confidence            45677777777888877755689999999997 589999999999999999987655333222                 


Q ss_pred             HHHhcCCccEEEEcCCCcccHHHHHhccccCCEEEEecCC
Q 018067          241 MQAAMGTMDGIIDTVSAVHPLMPLIGLLKSQGKLVLVGAP  280 (361)
Q Consensus       241 ~~~~~~g~d~vid~~g~~~~~~~~~~~l~~~G~~v~~g~~  280 (361)
                          ...+|+||.++|.+..+  -.+.++++..++.+|..
T Consensus       200 ----~~~ADIVI~Avg~p~lI--~~~~vk~GavVIDVgi~  233 (288)
T 1b0a_A          200 ----VENADLLIVAVGKPGFI--PGDWIKEGAIVIDVGIN  233 (288)
T ss_dssp             ----HHHCSEEEECSCCTTCB--CTTTSCTTCEEEECCCE
T ss_pred             ----hccCCEEEECCCCcCcC--CHHHcCCCcEEEEccCC
Confidence                23489999999988633  33457899999999975

>2h7i_A Enoyl-[acyl-carrier-protein] reductase [NADH]; oxidoreductase, INHA, enoyl acyl carrier reductase, pyrrolid carboxamide; HET: NAD 566; 1.62A {Mycobacterium tuberculosis} SCOP: c.2.1.2 PDB: 1p44_A* 1p45_A* 2b35_A* 2b36_A* 2b37_A* 2aq8_A* 2h7l_A* 2h7m_A* 2h7n_A* 2h7p_A* 2nsd_A* 2pr2_A* 2x22_A* 2x23_A* 3fne_A* 3fnf_A* 3fng_A* 3fnh_A* 3oew_A* 2aqh_A* ...

Probab=97.29  E-value=0.0012  Score=57.99  Aligned_cols=75  Identities=16%  Similarity=0.325  Sum_probs=54.3

Q ss_pred             CCCEEEEEc---CChHHHHHHHHHHHcCCeEEEEeCCchh-HHHHHHHcCCC---EEecCCCHHHHHHh-------cC--
Q 018067          183 PGMHVGVVG---LGGLGHVAVKFAKAMGVKVTVISTSPSK-KSEAIERLGAD---SFLVSRDQDEMQAA-------MG--  246 (361)
Q Consensus       183 ~g~~vlV~G---ag~vG~~a~~la~~~g~~vi~~~~~~~~-~~~~~~~~g~~---~vv~~~~~~~~~~~-------~~--  246 (361)
                      .++++||.|   +|++|.++++.+...|++|++++++.++ ..++.++++..   ...|..+++.+.++       .+  
T Consensus         6 ~~k~vlVTGa~~s~gIG~aia~~l~~~G~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~Dv~~~~~v~~~~~~~~~~~g~~   85 (269)
T 2h7i_A            6 DGKRILVSGIITDSSIAFHIARVAQEQGAQLVLTGFDRLRLIQRITDRLPAKAPLLELDVQNEEHLASLAGRVTEAIGAG   85 (269)
T ss_dssp             TTCEEEECCCSSTTSHHHHHHHHHHHTTCEEEEEECSCHHHHHHHHTTSSSCCCEEECCTTCHHHHHHHHHHHHHHHCTT
T ss_pred             CCCEEEEECCCCCCchHHHHHHHHHHCCCEEEEEecChHHHHHHHHHhcCCCceEEEccCCCHHHHHHHHHHHHHHhCCC
Confidence            468899998   4899999999999999999999988765 35555555532   22355565543332       23  


Q ss_pred             -CccEEEEcCCC
Q 018067          247 -TMDGIIDTVSA  257 (361)
Q Consensus       247 -g~d~vid~~g~  257 (361)
                       ++|++|+++|.
T Consensus        86 ~~iD~lv~nAg~   97 (269)
T 2h7i_A           86 NKLDGVVHSIGF   97 (269)
T ss_dssp             CCEEEEEECCCC
T ss_pred             CCceEEEECCcc
Confidence             79999999984

>4a5o_A Bifunctional protein fold; oxidoreductase, hydrolase; 2.20A {Pseudomonas aeruginosa PAO1}

Probab=97.29  E-value=0.0016  Score=57.19  Aligned_cols=97  Identities=19%  Similarity=0.121  Sum_probs=75.1

Q ss_pred             cccchhhhhhhhHhhhcCCCCCCCEEEEEcC-ChHHHHHHHHHHHcCCeEEEEeCCchhHHHHHHHcCCCEEecCCCHHH
Q 018067          162 APLLCAGITVYSPLRFYGLDKPGMHVGVVGL-GGLGHVAVKFAKAMGVKVTVISTSPSKKSEAIERLGADSFLVSRDQDE  240 (361)
Q Consensus       162 a~l~~~~~ta~~~l~~~~~~~~g~~vlV~Ga-g~vG~~a~~la~~~g~~vi~~~~~~~~~~~~~~~~g~~~vv~~~~~~~  240 (361)
                      ..+||+...+...+++...--.|++++|+|. +.+|..+++++...|++|+++.+....                     
T Consensus       139 ~~~PcTp~gv~~lL~~~~i~l~Gk~vvVvGrs~iVG~plA~lL~~~gAtVtv~hs~T~~---------------------  197 (286)
T 4a5o_A          139 LLRPCTPKGIMTLLASTGADLYGMDAVVVGASNIVGRPMALELLLGGCTVTVTHRFTRD---------------------  197 (286)
T ss_dssp             SSCCHHHHHHHHHHHHTTCCCTTCEEEEECTTSTTHHHHHHHHHHTTCEEEEECTTCSC---------------------
T ss_pred             CCCCCCHHHHHHHHHHhCCCCCCCEEEEECCCchhHHHHHHHHHHCCCeEEEEeCCCcC---------------------
Confidence            4567887888888888775468999999997 559999999999999999887654322                     


Q ss_pred             HHHhcCCccEEEEcCCCcccHHHHHhccccCCEEEEecCCC
Q 018067          241 MQAAMGTMDGIIDTVSAVHPLMPLIGLLKSQGKLVLVGAPE  281 (361)
Q Consensus       241 ~~~~~~g~d~vid~~g~~~~~~~~~~~l~~~G~~v~~g~~~  281 (361)
                      +.+....+|++|.++|.+..+  -.+.++++..++.+|...
T Consensus       198 L~~~~~~ADIVI~Avg~p~~I--~~~~vk~GavVIDvgi~~  236 (286)
T 4a5o_A          198 LADHVSRADLVVVAAGKPGLV--KGEWIKEGAIVIDVGINR  236 (286)
T ss_dssp             HHHHHHTCSEEEECCCCTTCB--CGGGSCTTCEEEECCSCS
T ss_pred             HHHHhccCCEEEECCCCCCCC--CHHHcCCCeEEEEecccc
Confidence            223334689999999988643  336679999999999754

>1zk4_A R-specific alcohol dehydrogenase; short chain reductases/dehydrogenases, magnesium dependence, oxidoreductase; HET: NAP; 1.00A {Lactobacillus brevis} SCOP: c.2.1.2 PDB: 1nxq_A* 1zjy_A* 1zjz_A* 1zk0_A* 1zk1_A* 1zk2_A 1zk3_A

Probab=97.29  E-value=0.0015  Score=56.46  Aligned_cols=75  Identities=17%  Similarity=0.213  Sum_probs=55.2

Q ss_pred             CCCEEEEEcC-ChHHHHHHHHHHHcCCeEEEEeCCchhHHHHHHHcCC--C---EEecCCCHHHHHHhc-------CCcc
Q 018067          183 PGMHVGVVGL-GGLGHVAVKFAKAMGVKVTVISTSPSKKSEAIERLGA--D---SFLVSRDQDEMQAAM-------GTMD  249 (361)
Q Consensus       183 ~g~~vlV~Ga-g~vG~~a~~la~~~g~~vi~~~~~~~~~~~~~~~~g~--~---~vv~~~~~~~~~~~~-------~g~d  249 (361)
                      .++++||.|+ |.+|..+++.+...|++|++++++.++...+.+++..  .   ...|..+++.+.++.       +++|
T Consensus         5 ~~k~vlVtGasggiG~~~a~~l~~~G~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~D~~~~~~~~~~~~~~~~~~~~id   84 (251)
T 1zk4_A            5 DGKVAIITGGTLGIGLAIATKFVEEGAKVMITGRHSDVGEKAAKSVGTPDQIQFFQHDSSDEDGWTKLFDATEKAFGPVS   84 (251)
T ss_dssp             TTCEEEETTTTSHHHHHHHHHHHHTTCEEEEEESCHHHHHHHHHHHCCTTTEEEEECCTTCHHHHHHHHHHHHHHHSSCC
T ss_pred             CCcEEEEeCCCChHHHHHHHHHHHCCCEEEEEeCCHHHHHHHHHHhhccCceEEEECCCCCHHHHHHHHHHHHHHhCCCC
Confidence            4678999997 9999999999999999999999988776666555431  1   123555554443322       4699


Q ss_pred             EEEEcCCC
Q 018067          250 GIIDTVSA  257 (361)
Q Consensus       250 ~vid~~g~  257 (361)
                      ++|+++|.
T Consensus        85 ~li~~Ag~   92 (251)
T 1zk4_A           85 TLVNNAGI   92 (251)
T ss_dssp             EEEECCCC
T ss_pred             EEEECCCC
Confidence            99999984

>3pgx_A Carveol dehydrogenase; structural genomics, seattle structural genomics center for infectious disease, ssgcid; HET: NAD; 1.85A {Mycobacterium avium} SCOP: c.2.1.0

Probab=97.28  E-value=0.0017  Score=57.32  Aligned_cols=76  Identities=20%  Similarity=0.287  Sum_probs=53.9

Q ss_pred             CCCCEEEEEcC-ChHHHHHHHHHHHcCCeEEEEeC-------------CchhHHHHHHH---cCCCE---EecCCCHHHH
Q 018067          182 KPGMHVGVVGL-GGLGHVAVKFAKAMGVKVTVIST-------------SPSKKSEAIER---LGADS---FLVSRDQDEM  241 (361)
Q Consensus       182 ~~g~~vlV~Ga-g~vG~~a~~la~~~g~~vi~~~~-------------~~~~~~~~~~~---~g~~~---vv~~~~~~~~  241 (361)
                      -.|+++||.|+ |++|.++++.+...|++|+++++             +.++..++.+.   .|...   ..|-.+++.+
T Consensus        13 l~gk~~lVTGas~gIG~a~a~~la~~G~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~Dv~~~~~v   92 (280)
T 3pgx_A           13 LQGRVAFITGAARGQGRSHAVRLAAEGADIIACDICAPVSASVTYAPASPEDLDETARLVEDQGRKALTRVLDVRDDAAL   92 (280)
T ss_dssp             TTTCEEEEESTTSHHHHHHHHHHHHTTCEEEEEECCSCCCTTCCSCCCCHHHHHHHHHHHHTTTCCEEEEECCTTCHHHH
T ss_pred             cCCCEEEEECCCcHHHHHHHHHHHHCCCEEEEEeccccccccccccccCHHHHHHHHHHHHhcCCeEEEEEcCCCCHHHH
Confidence            46789999997 99999999999999999999987             44444444333   34332   2355565544


Q ss_pred             HHh-------cCCccEEEEcCCC
Q 018067          242 QAA-------MGTMDGIIDTVSA  257 (361)
Q Consensus       242 ~~~-------~~g~d~vid~~g~  257 (361)
                      .++       .+++|++|+++|.
T Consensus        93 ~~~~~~~~~~~g~id~lvnnAg~  115 (280)
T 3pgx_A           93 RELVADGMEQFGRLDVVVANAGV  115 (280)
T ss_dssp             HHHHHHHHHHHCCCCEEEECCCC
T ss_pred             HHHHHHHHHHcCCCCEEEECCCC
Confidence            433       2489999999985

>1cyd_A Carbonyl reductase; short-chain dehydrogenase, oxidoreductase; HET: NAP; 1.80A {Mus musculus} SCOP: c.2.1.2

Probab=97.28  E-value=0.0021  Score=55.24  Aligned_cols=75  Identities=24%  Similarity=0.369  Sum_probs=57.0

Q ss_pred             CCCEEEEEcC-ChHHHHHHHHHHHcCCeEEEEeCCchhHHHHHHHc-CCCE-EecCCCHHHHHHhc---CCccEEEEcCC
Q 018067          183 PGMHVGVVGL-GGLGHVAVKFAKAMGVKVTVISTSPSKKSEAIERL-GADS-FLVSRDQDEMQAAM---GTMDGIIDTVS  256 (361)
Q Consensus       183 ~g~~vlV~Ga-g~vG~~a~~la~~~g~~vi~~~~~~~~~~~~~~~~-g~~~-vv~~~~~~~~~~~~---~g~d~vid~~g  256 (361)
                      +++++||.|+ |.+|...++.+...|++|++++++.++..++.++. +... ..|..+++.+.++.   +++|++|+++|
T Consensus         6 ~~~~vlVTGasggiG~~~a~~l~~~G~~V~~~~r~~~~~~~~~~~~~~~~~~~~D~~~~~~~~~~~~~~~~id~vi~~Ag   85 (244)
T 1cyd_A            6 SGLRALVTGAGKGIGRDTVKALHASGAKVVAVTRTNSDLVSLAKECPGIEPVCVDLGDWDATEKALGGIGPVDLLVNNAA   85 (244)
T ss_dssp             TTCEEEEESTTSHHHHHHHHHHHHTTCEEEEEESCHHHHHHHHHHSTTCEEEECCTTCHHHHHHHHTTCCCCSEEEECCC
T ss_pred             CCCEEEEeCCCchHHHHHHHHHHHCCCEEEEEeCCHHHHHHHHHhccCCCcEEecCCCHHHHHHHHHHcCCCCEEEECCc
Confidence            5678999998 99999999999999999999999887766665544 2322 23556666665543   36899999998


Q ss_pred             C
Q 018067          257 A  257 (361)
Q Consensus       257 ~  257 (361)
                      .
T Consensus        86 ~   86 (244)
T 1cyd_A           86 L   86 (244)
T ss_dssp             C
T ss_pred             c
Confidence            3

>4gkb_A 3-oxoacyl-[acyl-carrier protein] reductase; putative sugar dehydrogenase, enzyme function initiative, EF structural genomics; 1.50A {Burkholderia multivorans} PDB: 4glo_A*

Probab=97.27  E-value=0.0017  Score=56.66  Aligned_cols=98  Identities=14%  Similarity=0.159  Sum_probs=67.1

Q ss_pred             CCCEEEEEcC-ChHHHHHHHHHHHcCCeEEEEeCCchhHHHH--HHHcCCC---EEecCCCHHHHHHh-------cCCcc
Q 018067          183 PGMHVGVVGL-GGLGHVAVKFAKAMGVKVTVISTSPSKKSEA--IERLGAD---SFLVSRDQDEMQAA-------MGTMD  249 (361)
Q Consensus       183 ~g~~vlV~Ga-g~vG~~a~~la~~~g~~vi~~~~~~~~~~~~--~~~~g~~---~vv~~~~~~~~~~~-------~~g~d  249 (361)
                      +|+++||.|+ +++|.++++.+-..|++|++++++.++...+  .++.+..   ...|-.+++.++++       .++.|
T Consensus         6 ~gKvalVTGas~GIG~aia~~la~~Ga~Vv~~~r~~~~~~~~~~~~~~~~~~~~~~~Dv~~~~~v~~~v~~~~~~~G~iD   85 (258)
T 4gkb_A            6 QDKVVIVTGGASGIGGAISMRLAEERAIPVVFARHAPDGAFLDALAQRQPRATYLPVELQDDAQCRDAVAQTIATFGRLD   85 (258)
T ss_dssp             TTCEEEEETTTSHHHHHHHHHHHHTTCEEEEEESSCCCHHHHHHHHHHCTTCEEEECCTTCHHHHHHHHHHHHHHHSCCC
T ss_pred             CCCEEEEeCCCCHHHHHHHHHHHHcCCEEEEEECCcccHHHHHHHHhcCCCEEEEEeecCCHHHHHHHHHHHHHHhCCCC
Confidence            6899999997 9999999999999999999999887653322  1233432   22355565443332       25799


Q ss_pred             EEEEcCCCcc------------------------cHHHHHhcc-ccCCEEEEecCC
Q 018067          250 GIIDTVSAVH------------------------PLMPLIGLL-KSQGKLVLVGAP  280 (361)
Q Consensus       250 ~vid~~g~~~------------------------~~~~~~~~l-~~~G~~v~~g~~  280 (361)
                      ++++++|...                        ..+.++..+ +.+|++|.+++.
T Consensus        86 iLVNnAGi~~~~~~~~~~e~~~~~~~vNl~g~~~~~~~~~p~m~~~~G~IVnisS~  141 (258)
T 4gkb_A           86 GLVNNAGVNDGIGLDAGRDAFVASLERNLIHYYAMAHYCVPHLKATRGAIVNISSK  141 (258)
T ss_dssp             EEEECCCCCCCCCTTSCHHHHHHHHHHHTHHHHHHHHHHHHHHHHHTCEEEEECCT
T ss_pred             EEEECCCCCCCCCccCCHHHHHHHHHHHhHHHHHHHHHHHHHHHhcCCeEEEEeeh
Confidence            9999998521                        223344455 357999999874

>2q2v_A Beta-D-hydroxybutyrate dehydrogenase; SDR, oxidoreductase; HET: NAD; 1.90A {Pseudomonas putida} PDB: 2q2q_A* 2q2w_A

Probab=97.27  E-value=0.0015  Score=56.86  Aligned_cols=75  Identities=17%  Similarity=0.260  Sum_probs=51.3

Q ss_pred             CCCEEEEEcC-ChHHHHHHHHHHHcCCeEEEEeCCchh-HHHHHHHcCCCEE---ecCCCHHHHHHhc-------CCccE
Q 018067          183 PGMHVGVVGL-GGLGHVAVKFAKAMGVKVTVISTSPSK-KSEAIERLGADSF---LVSRDQDEMQAAM-------GTMDG  250 (361)
Q Consensus       183 ~g~~vlV~Ga-g~vG~~a~~la~~~g~~vi~~~~~~~~-~~~~~~~~g~~~v---v~~~~~~~~~~~~-------~g~d~  250 (361)
                      .++++||.|+ |++|..+++.+...|++|++++++.++ .....+..+....   .|..+++.+.++.       +++|+
T Consensus         3 ~~k~vlVTGas~giG~~ia~~l~~~G~~V~~~~r~~~~~~~~~l~~~~~~~~~~~~D~~~~~~v~~~~~~~~~~~g~id~   82 (255)
T 2q2v_A            3 KGKTALVTGSTSGIGLGIAQVLARAGANIVLNGFGDPAPALAEIARHGVKAVHHPADLSDVAQIEALFALAEREFGGVDI   82 (255)
T ss_dssp             TTCEEEESSCSSHHHHHHHHHHHHTTCEEEEECSSCCHHHHHHHHTTSCCEEEECCCTTSHHHHHHHHHHHHHHHSSCSE
T ss_pred             CCCEEEEeCCCcHHHHHHHHHHHHCCCEEEEEeCCchHHHHHHHHhcCCceEEEeCCCCCHHHHHHHHHHHHHHcCCCCE
Confidence            4678999997 999999999999999999999887652 1111122343321   2445555444332       48999


Q ss_pred             EEEcCCC
Q 018067          251 IIDTVSA  257 (361)
Q Consensus       251 vid~~g~  257 (361)
                      +|+++|.
T Consensus        83 lv~~Ag~   89 (255)
T 2q2v_A           83 LVNNAGI   89 (255)
T ss_dssp             EEECCCC
T ss_pred             EEECCCC
Confidence            9999984

>2jah_A Clavulanic acid dehydrogenase; short-chain dehydrogenase/reductase, lactamase inhibitor, AN biosynthesis, NADPH, oxidoreductase; HET: MSE NDP; 1.80A {Streptomyces clavuligerus} PDB: 2jap_A*

Probab=97.27  E-value=0.0016  Score=56.44  Aligned_cols=75  Identities=23%  Similarity=0.336  Sum_probs=55.7

Q ss_pred             CCCEEEEEcC-ChHHHHHHHHHHHcCCeEEEEeCCchhHHHHHHHc---CCCE---EecCCCHHHHHHh-------cCCc
Q 018067          183 PGMHVGVVGL-GGLGHVAVKFAKAMGVKVTVISTSPSKKSEAIERL---GADS---FLVSRDQDEMQAA-------MGTM  248 (361)
Q Consensus       183 ~g~~vlV~Ga-g~vG~~a~~la~~~g~~vi~~~~~~~~~~~~~~~~---g~~~---vv~~~~~~~~~~~-------~~g~  248 (361)
                      .++++||.|+ |++|.++++.+...|++|++++++.++...+.+++   +...   ..|..+++.+.++       .+++
T Consensus         6 ~~k~~lVTGas~gIG~aia~~l~~~G~~V~~~~r~~~~~~~~~~~l~~~~~~~~~~~~Dv~~~~~~~~~~~~~~~~~g~i   85 (247)
T 2jah_A            6 QGKVALITGASSGIGEATARALAAEGAAVAIAARRVEKLRALGDELTAAGAKVHVLELDVADRQGVDAAVASTVEALGGL   85 (247)
T ss_dssp             TTCEEEEESCSSHHHHHHHHHHHHTTCEEEEEESCHHHHHHHHHHHHHTTCCEEEEECCTTCHHHHHHHHHHHHHHHSCC
T ss_pred             CCCEEEEECCCCHHHHHHHHHHHHCCCEEEEEECCHHHHHHHHHHHHhcCCcEEEEECCCCCHHHHHHHHHHHHHHcCCC
Confidence            4688999997 99999999999999999999999887766654443   4332   2355565544332       2479


Q ss_pred             cEEEEcCCC
Q 018067          249 DGIIDTVSA  257 (361)
Q Consensus       249 d~vid~~g~  257 (361)
                      |++|+++|.
T Consensus        86 d~lv~nAg~   94 (247)
T 2jah_A           86 DILVNNAGI   94 (247)
T ss_dssp             SEEEECCCC
T ss_pred             CEEEECCCC
Confidence            999999984

>3kvo_A Hydroxysteroid dehydrogenase-like protein 2; HSDL2, human hydroxysteroid dehydrogenase like 2, SDHL2, STR genomics, structural genomics consortium; HET: NAP; 2.25A {Homo sapiens}

Probab=97.26  E-value=0.0031  Score=57.61  Aligned_cols=76  Identities=25%  Similarity=0.428  Sum_probs=54.6

Q ss_pred             CCCCEEEEEcC-ChHHHHHHHHHHHcCCeEEEEeCCchh-------H---HHHHHHcCCCE---EecCCCHHHHHHh---
Q 018067          182 KPGMHVGVVGL-GGLGHVAVKFAKAMGVKVTVISTSPSK-------K---SEAIERLGADS---FLVSRDQDEMQAA---  244 (361)
Q Consensus       182 ~~g~~vlV~Ga-g~vG~~a~~la~~~g~~vi~~~~~~~~-------~---~~~~~~~g~~~---vv~~~~~~~~~~~---  244 (361)
                      -.|+++||.|+ ++||.+++..+...|++|++++++.++       .   ....+..|...   ..|..+++.+.++   
T Consensus        43 l~gk~vlVTGas~GIG~aia~~La~~Ga~Vvl~~r~~~~~~~l~~~l~~~~~~~~~~g~~~~~~~~Dv~d~~~v~~~~~~  122 (346)
T 3kvo_A           43 LAGCTVFITGASRGIGKAIALKAAKDGANIVIAAKTAQPHPKLLGTIYTAAEEIEAVGGKALPCIVDVRDEQQISAAVEK  122 (346)
T ss_dssp             TTTCEEEEETTTSHHHHHHHHHHHTTTCEEEEEESCCSCCSSSCCCHHHHHHHHHHTTCEEEEEECCTTCHHHHHHHHHH
T ss_pred             CCCCEEEEeCCChHHHHHHHHHHHHCCCEEEEEECChhhhhhhHHHHHHHHHHHHhcCCeEEEEEccCCCHHHHHHHHHH
Confidence            36789999997 999999999999999999999988763       1   22223445432   2355665544433   


Q ss_pred             ----cCCccEEEEcCCC
Q 018067          245 ----MGTMDGIIDTVSA  257 (361)
Q Consensus       245 ----~~g~d~vid~~g~  257 (361)
                          .+++|++|+++|.
T Consensus       123 ~~~~~g~iDilVnnAG~  139 (346)
T 3kvo_A          123 AIKKFGGIDILVNNASA  139 (346)
T ss_dssp             HHHHHSCCCEEEECCCC
T ss_pred             HHHHcCCCCEEEECCCC
Confidence                2489999999984

>3dqp_A Oxidoreductase YLBE; alpha-beta protein., structural genomics, PSI-2, protein structure initiative; 1.40A {Lactococcus lactis subsp}

Probab=97.25  E-value=0.00064  Score=57.64  Aligned_cols=93  Identities=14%  Similarity=0.159  Sum_probs=66.1

Q ss_pred             EEEEEcC-ChHHHHHHHHHHHcCCeEEEEeCCchhHHHHHHHcCCC-EEecCCC-HHHHHHhcCCccEEEEcCCCcc---
Q 018067          186 HVGVVGL-GGLGHVAVKFAKAMGVKVTVISTSPSKKSEAIERLGAD-SFLVSRD-QDEMQAAMGTMDGIIDTVSAVH---  259 (361)
Q Consensus       186 ~vlV~Ga-g~vG~~a~~la~~~g~~vi~~~~~~~~~~~~~~~~g~~-~vv~~~~-~~~~~~~~~g~d~vid~~g~~~---  259 (361)
                      +|||+|+ |.+|..+++.+...|.+|++++++.++...+   .+.. ...|..+ ++.+.++..++|+||+++|...   
T Consensus         2 ~ilItGatG~iG~~l~~~L~~~g~~V~~~~R~~~~~~~~---~~~~~~~~D~~d~~~~~~~~~~~~d~vi~~ag~~~~~~   78 (219)
T 3dqp_A            2 KIFIVGSTGRVGKSLLKSLSTTDYQIYAGARKVEQVPQY---NNVKAVHFDVDWTPEEMAKQLHGMDAIINVSGSGGKSL   78 (219)
T ss_dssp             EEEEESTTSHHHHHHHHHHTTSSCEEEEEESSGGGSCCC---TTEEEEECCTTSCHHHHHTTTTTCSEEEECCCCTTSSC
T ss_pred             eEEEECCCCHHHHHHHHHHHHCCCEEEEEECCccchhhc---CCceEEEecccCCHHHHHHHHcCCCEEEECCcCCCCCc
Confidence            6899997 9999999999999999999999987654322   1222 1235566 7777777789999999998632   


Q ss_pred             ------cHHHHHhccccC--CEEEEecCCC
Q 018067          260 ------PLMPLIGLLKSQ--GKLVLVGAPE  281 (361)
Q Consensus       260 ------~~~~~~~~l~~~--G~~v~~g~~~  281 (361)
                            .....++.++..  ++++.++...
T Consensus        79 ~~~n~~~~~~l~~a~~~~~~~~iv~~SS~~  108 (219)
T 3dqp_A           79 LKVDLYGAVKLMQAAEKAEVKRFILLSTIF  108 (219)
T ss_dssp             CCCCCHHHHHHHHHHHHTTCCEEEEECCTT
T ss_pred             EeEeHHHHHHHHHHHHHhCCCEEEEECccc
Confidence                  122344444333  5899988753

>2wyu_A Enoyl-[acyl carrier protein] reductase; oxidoreductase, fatty acid biosynthesis, oxidation reduction; 1.50A {Thermus thermophilus} PDB: 1ulu_A 2wyv_A* 2wyw_A* 2yw9_A*

Probab=97.25  E-value=0.002  Score=56.32  Aligned_cols=75  Identities=20%  Similarity=0.306  Sum_probs=52.6

Q ss_pred             CCCEEEEEcC---ChHHHHHHHHHHHcCCeEEEEeCCch---hHHHHHHHcCCCE--EecCCCHHHHHHh-------cCC
Q 018067          183 PGMHVGVVGL---GGLGHVAVKFAKAMGVKVTVISTSPS---KKSEAIERLGADS--FLVSRDQDEMQAA-------MGT  247 (361)
Q Consensus       183 ~g~~vlV~Ga---g~vG~~a~~la~~~g~~vi~~~~~~~---~~~~~~~~~g~~~--vv~~~~~~~~~~~-------~~g  247 (361)
                      .++++||.|+   |++|..+++.+...|++|++++++++   ...++.++.+...  ..|..+++.+.++       .++
T Consensus         7 ~~k~vlVTGas~~~gIG~~ia~~l~~~G~~V~~~~r~~~~~~~~~~l~~~~~~~~~~~~D~~~~~~v~~~~~~~~~~~g~   86 (261)
T 2wyu_A            7 SGKKALVMGVTNQRSLGFAIAAKLKEAGAEVALSYQAERLRPEAEKLAEALGGALLFRADVTQDEELDALFAGVKEAFGG   86 (261)
T ss_dssp             TTCEEEEESCCSSSSHHHHHHHHHHHHTCEEEEEESCGGGHHHHHHHHHHTTCCEEEECCTTCHHHHHHHHHHHHHHHSS
T ss_pred             CCCEEEEECCCCCCcHHHHHHHHHHHCCCEEEEEcCCHHHHHHHHHHHHhcCCcEEEECCCCCHHHHHHHHHHHHHHcCC
Confidence            4688999985   69999999999888999999998875   3334433344222  2355565544432       247


Q ss_pred             ccEEEEcCCC
Q 018067          248 MDGIIDTVSA  257 (361)
Q Consensus       248 ~d~vid~~g~  257 (361)
                      +|++|+++|.
T Consensus        87 iD~lv~~Ag~   96 (261)
T 2wyu_A           87 LDYLVHAIAF   96 (261)
T ss_dssp             EEEEEECCCC
T ss_pred             CCEEEECCCC
Confidence            9999999984

>3h7a_A Short chain dehydrogenase; oxidoreductase, PSI-2, NYSGXRC, structural genomics, protein structure initiative; 1.87A {Rhodopseudomonas palustris}

Probab=97.25  E-value=0.0014  Score=57.10  Aligned_cols=75  Identities=24%  Similarity=0.258  Sum_probs=56.4

Q ss_pred             CCCEEEEEcC-ChHHHHHHHHHHHcCCeEEEEeCCchhHHHHHHHc---CCCE---EecCCCHHHHHHhc------CCcc
Q 018067          183 PGMHVGVVGL-GGLGHVAVKFAKAMGVKVTVISTSPSKKSEAIERL---GADS---FLVSRDQDEMQAAM------GTMD  249 (361)
Q Consensus       183 ~g~~vlV~Ga-g~vG~~a~~la~~~g~~vi~~~~~~~~~~~~~~~~---g~~~---vv~~~~~~~~~~~~------~g~d  249 (361)
                      .++++||.|+ |++|.++++.+...|++|++++++.++...+.+++   +...   ..|-.+++.+.++.      +++|
T Consensus         6 ~~k~vlVTGas~GIG~aia~~l~~~G~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~Dv~~~~~v~~~~~~~~~~g~id   85 (252)
T 3h7a_A            6 RNATVAVIGAGDYIGAEIAKKFAAEGFTVFAGRRNGEKLAPLVAEIEAAGGRIVARSLDARNEDEVTAFLNAADAHAPLE   85 (252)
T ss_dssp             CSCEEEEECCSSHHHHHHHHHHHHTTCEEEEEESSGGGGHHHHHHHHHTTCEEEEEECCTTCHHHHHHHHHHHHHHSCEE
T ss_pred             CCCEEEEECCCchHHHHHHHHHHHCCCEEEEEeCCHHHHHHHHHHHHhcCCeEEEEECcCCCHHHHHHHHHHHHhhCCce
Confidence            5788999997 99999999999999999999999988776665554   4321   23555554333321      5899


Q ss_pred             EEEEcCCC
Q 018067          250 GIIDTVSA  257 (361)
Q Consensus       250 ~vid~~g~  257 (361)
                      ++|+++|.
T Consensus        86 ~lv~nAg~   93 (252)
T 3h7a_A           86 VTIFNVGA   93 (252)
T ss_dssp             EEEECCCC
T ss_pred             EEEECCCc
Confidence            99999985

>3imf_A Short chain dehydrogenase; structural genomics, infectious D center for structural genomics of infectious diseases, oxidoreductase, csgid; HET: MSE; 1.99A {Bacillus anthracis str}

Probab=97.24  E-value=0.0011  Score=57.80  Aligned_cols=75  Identities=20%  Similarity=0.280  Sum_probs=56.6

Q ss_pred             CCCEEEEEcC-ChHHHHHHHHHHHcCCeEEEEeCCchhHHHHHHHcC---CC---EEecCCCHHHHHHh-------cCCc
Q 018067          183 PGMHVGVVGL-GGLGHVAVKFAKAMGVKVTVISTSPSKKSEAIERLG---AD---SFLVSRDQDEMQAA-------MGTM  248 (361)
Q Consensus       183 ~g~~vlV~Ga-g~vG~~a~~la~~~g~~vi~~~~~~~~~~~~~~~~g---~~---~vv~~~~~~~~~~~-------~~g~  248 (361)
                      .++++||.|+ |++|.++++.+...|++|++++++.++..++.+++.   ..   ...|-.+++.+.++       .+++
T Consensus         5 ~~k~vlVTGas~gIG~aia~~l~~~G~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~Dv~~~~~v~~~~~~~~~~~g~i   84 (257)
T 3imf_A            5 KEKVVIITGGSSGMGKGMATRFAKEGARVVITGRTKEKLEEAKLEIEQFPGQILTVQMDVRNTDDIQKMIEQIDEKFGRI   84 (257)
T ss_dssp             TTCEEEETTTTSHHHHHHHHHHHHTTCEEEEEESCHHHHHHHHHHHCCSTTCEEEEECCTTCHHHHHHHHHHHHHHHSCC
T ss_pred             CCCEEEEECCCCHHHHHHHHHHHHCCCEEEEEeCCHHHHHHHHHHHHhcCCcEEEEEccCCCHHHHHHHHHHHHHHcCCC
Confidence            4788999987 999999999999999999999999888777766553   22   12355555444332       2489


Q ss_pred             cEEEEcCCC
Q 018067          249 DGIIDTVSA  257 (361)
Q Consensus       249 d~vid~~g~  257 (361)
                      |++|+++|.
T Consensus        85 d~lv~nAg~   93 (257)
T 3imf_A           85 DILINNAAG   93 (257)
T ss_dssp             CEEEECCCC
T ss_pred             CEEEECCCC
Confidence            999999984

>3qvo_A NMRA family protein; structural genomics, PSI-biology, midwest center for structu genomics, MCSG, unknown function; HET: MNB; 2.30A {Shigella flexneri 2A}

Probab=97.24  E-value=0.00034  Score=60.25  Aligned_cols=97  Identities=14%  Similarity=0.175  Sum_probs=68.5

Q ss_pred             CCEEEEEcC-ChHHHHHHHHHHHcC-CeEEEEeCCchhHHHHHHHcCCC-EEecCCCHHHHHHhcCCccEEEEcCCCccc
Q 018067          184 GMHVGVVGL-GGLGHVAVKFAKAMG-VKVTVISTSPSKKSEAIERLGAD-SFLVSRDQDEMQAAMGTMDGIIDTVSAVHP  260 (361)
Q Consensus       184 g~~vlV~Ga-g~vG~~a~~la~~~g-~~vi~~~~~~~~~~~~~~~~g~~-~vv~~~~~~~~~~~~~g~d~vid~~g~~~~  260 (361)
                      ..+|||+|+ |.+|..+++.+...| ++|++++++.++...+. .-++. ...|..+++.+.++..++|++|+++|....
T Consensus        23 mk~vlVtGatG~iG~~l~~~L~~~G~~~V~~~~R~~~~~~~~~-~~~~~~~~~Dl~d~~~~~~~~~~~D~vv~~a~~~~~  101 (236)
T 3qvo_A           23 MKNVLILGAGGQIARHVINQLADKQTIKQTLFARQPAKIHKPY-PTNSQIIMGDVLNHAALKQAMQGQDIVYANLTGEDL  101 (236)
T ss_dssp             CEEEEEETTTSHHHHHHHHHHTTCTTEEEEEEESSGGGSCSSC-CTTEEEEECCTTCHHHHHHHHTTCSEEEEECCSTTH
T ss_pred             ccEEEEEeCCcHHHHHHHHHHHhCCCceEEEEEcChhhhcccc-cCCcEEEEecCCCHHHHHHHhcCCCEEEEcCCCCch
Confidence            357999997 999999999999999 89999999876543221 11222 123566777778877899999999987541


Q ss_pred             ---HHHHHhcccc--CCEEEEecCCC
Q 018067          261 ---LMPLIGLLKS--QGKLVLVGAPE  281 (361)
Q Consensus       261 ---~~~~~~~l~~--~G~~v~~g~~~  281 (361)
                         .+..++.++.  .+++|.++...
T Consensus       102 ~~~~~~~~~~~~~~~~~~iV~iSS~~  127 (236)
T 3qvo_A          102 DIQANSVIAAMKACDVKRLIFVLSLG  127 (236)
T ss_dssp             HHHHHHHHHHHHHTTCCEEEEECCCC
T ss_pred             hHHHHHHHHHHHHcCCCEEEEEecce
Confidence               2334445543  36899988643

>3zv4_A CIS-2,3-dihydrobiphenyl-2,3-DIOL dehydrogenase; oxidoreductase, short chain dehydrogenase/oxidoreductase, SD comamonas testosteroni; 1.80A {Pandoraea pnomenusa} SCOP: c.2.1.2 PDB: 2y99_A* 3zv3_A 2y93_A 3zv5_A* 3zv6_A* 1bdb_A*

Probab=97.24  E-value=0.0014  Score=57.97  Aligned_cols=75  Identities=24%  Similarity=0.308  Sum_probs=58.4

Q ss_pred             CCCEEEEEcC-ChHHHHHHHHHHHcCCeEEEEeCCchhHHHHHHHcCCCE---EecCCCHHHHHHh-------cCCccEE
Q 018067          183 PGMHVGVVGL-GGLGHVAVKFAKAMGVKVTVISTSPSKKSEAIERLGADS---FLVSRDQDEMQAA-------MGTMDGI  251 (361)
Q Consensus       183 ~g~~vlV~Ga-g~vG~~a~~la~~~g~~vi~~~~~~~~~~~~~~~~g~~~---vv~~~~~~~~~~~-------~~g~d~v  251 (361)
                      .|+++||.|+ +++|.++++.+...|++|++++++.++..++.++++...   ..|-.+.+.+.++       .+++|++
T Consensus         4 ~gk~~lVTGas~GIG~aia~~la~~G~~V~~~~r~~~~~~~~~~~~~~~~~~~~~Dv~~~~~v~~~~~~~~~~~g~iD~l   83 (281)
T 3zv4_A            4 TGEVALITGGASGLGRALVDRFVAEGARVAVLDKSAERLRELEVAHGGNAVGVVGDVRSLQDQKRAAERCLAAFGKIDTL   83 (281)
T ss_dssp             TTCEEEEETCSSHHHHHHHHHHHHTTCEEEEEESCHHHHHHHHHHTBTTEEEEECCTTCHHHHHHHHHHHHHHHSCCCEE
T ss_pred             CCCEEEEECCCcHHHHHHHHHHHHCcCEEEEEeCCHHHHHHHHHHcCCcEEEEEcCCCCHHHHHHHHHHHHHhcCCCCEE
Confidence            4788999997 999999999999999999999999988888877776542   2345555433322       2579999


Q ss_pred             EEcCCC
Q 018067          252 IDTVSA  257 (361)
Q Consensus       252 id~~g~  257 (361)
                      |+++|.
T Consensus        84 vnnAg~   89 (281)
T 3zv4_A           84 IPNAGI   89 (281)
T ss_dssp             ECCCCC
T ss_pred             EECCCc
Confidence            999984

>1qsg_A Enoyl-[acyl-carrier-protein] reductase; enoyl reductase, oxidoreductase; HET: GLC NAD TCL; 1.75A {Escherichia coli} SCOP: c.2.1.2 PDB: 1c14_A* 1i2z_A* 1i30_A* 1lx6_A* 1lxc_A* 1mfp_A* 2fhs_A 1qg6_A* 1dfg_A* 1dfh_A* 1d8a_A* 1dfi_A* 3pje_A* 3pjd_A* 3pjf_A*

Probab=97.24  E-value=0.0018  Score=56.74  Aligned_cols=75  Identities=13%  Similarity=0.228  Sum_probs=52.2

Q ss_pred             CCCEEEEEcC---ChHHHHHHHHHHHcCCeEEEEeCCc---hhHHHHHHHcCCCE--EecCCCHHHHHHhc-------CC
Q 018067          183 PGMHVGVVGL---GGLGHVAVKFAKAMGVKVTVISTSP---SKKSEAIERLGADS--FLVSRDQDEMQAAM-------GT  247 (361)
Q Consensus       183 ~g~~vlV~Ga---g~vG~~a~~la~~~g~~vi~~~~~~---~~~~~~~~~~g~~~--vv~~~~~~~~~~~~-------~g  247 (361)
                      .++++||.|+   |++|.++++.+...|++|++++++.   +...++.+..+...  ..|..+++.+.++.       ++
T Consensus         8 ~~k~vlVTGas~~~gIG~~ia~~l~~~G~~V~~~~r~~~~~~~~~~l~~~~~~~~~~~~D~~~~~~v~~~~~~~~~~~g~   87 (265)
T 1qsg_A            8 SGKRILVTGVASKLSIAYGIAQAMHREGAELAFTYQNDKLKGRVEEFAAQLGSDIVLQCDVAEDASIDTMFAELGKVWPK   87 (265)
T ss_dssp             TTCEEEECCCCSTTSHHHHHHHHHHHTTCEEEEEESSTTTHHHHHHHHHHTTCCCEEECCTTCHHHHHHHHHHHHTTCSS
T ss_pred             CCCEEEEECCCCCCCHHHHHHHHHHHCCCEEEEEcCcHHHHHHHHHHHHhcCCcEEEEccCCCHHHHHHHHHHHHHHcCC
Confidence            4678999985   6999999999999999999999876   33333433334322  23556655444322       37


Q ss_pred             ccEEEEcCCC
Q 018067          248 MDGIIDTVSA  257 (361)
Q Consensus       248 ~d~vid~~g~  257 (361)
                      +|++|+++|.
T Consensus        88 iD~lv~~Ag~   97 (265)
T 1qsg_A           88 FDGFVHSIGF   97 (265)
T ss_dssp             EEEEEECCCC
T ss_pred             CCEEEECCCC
Confidence            9999999984

>3ksu_A 3-oxoacyl-acyl carrier protein reductase; structural genomics, PSI-2, dehydrogenase, protein structure initiative; 2.30A {Oenococcus oeni psu-1}

Probab=97.23  E-value=0.0011  Score=58.14  Aligned_cols=98  Identities=16%  Similarity=0.218  Sum_probs=66.0

Q ss_pred             CCCEEEEEcC-ChHHHHHHHHHHHcCCeEEEEeCCc---hhHHHHHHHc---CCCE---EecCCCHHHHHHh-------c
Q 018067          183 PGMHVGVVGL-GGLGHVAVKFAKAMGVKVTVISTSP---SKKSEAIERL---GADS---FLVSRDQDEMQAA-------M  245 (361)
Q Consensus       183 ~g~~vlV~Ga-g~vG~~a~~la~~~g~~vi~~~~~~---~~~~~~~~~~---g~~~---vv~~~~~~~~~~~-------~  245 (361)
                      .|+++||.|+ +++|.++++.+...|++|+++++..   ++.+++.+++   |...   ..|-.+++.+.++       .
T Consensus        10 ~~k~vlVTGas~GIG~aia~~la~~G~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~~~Dv~d~~~v~~~~~~~~~~~   89 (262)
T 3ksu_A           10 KNKVIVIAGGIKNLGALTAKTFALESVNLVLHYHQAKDSDTANKLKDELEDQGAKVALYQSDLSNEEEVAKLFDFAEKEF   89 (262)
T ss_dssp             TTCEEEEETCSSHHHHHHHHHHTTSSCEEEEEESCGGGHHHHHHHHHHHHTTTCEEEEEECCCCSHHHHHHHHHHHHHHH
T ss_pred             CCCEEEEECCCchHHHHHHHHHHHCCCEEEEEecCccCHHHHHHHHHHHHhcCCcEEEEECCCCCHHHHHHHHHHHHHHc
Confidence            5789999997 9999999999999999999987653   2333333333   3322   2355555544433       2


Q ss_pred             CCccEEEEcCCCcc-------------------------cHHHHHhccccCCEEEEecCC
Q 018067          246 GTMDGIIDTVSAVH-------------------------PLMPLIGLLKSQGKLVLVGAP  280 (361)
Q Consensus       246 ~g~d~vid~~g~~~-------------------------~~~~~~~~l~~~G~~v~~g~~  280 (361)
                      +++|++|+++|...                         ..+.++..++++|+++.+++.
T Consensus        90 g~iD~lvnnAg~~~~~~~~~~~~~~~~~~~~~N~~g~~~l~~~~~~~m~~~g~iv~isS~  149 (262)
T 3ksu_A           90 GKVDIAINTVGKVLKKPIVETSEAEFDAMDTINNKVAYFFIKQAAKHMNPNGHIITIATS  149 (262)
T ss_dssp             CSEEEEEECCCCCCSSCGGGCCHHHHHHHHHHHHHHHHHHHHHHHTTEEEEEEEEEECCC
T ss_pred             CCCCEEEECCCCCCCCCcccCCHHHHHHHHHHHhHHHHHHHHHHHHhhcCCCEEEEEech
Confidence            47999999998420                         223344556678999999764

>1yde_A Retinal dehydrogenase/reductase 3; oxidoreductase, structural genomics, structural genomics CON SGC; 2.40A {Homo sapiens} SCOP: c.2.1.2

Probab=97.23  E-value=0.0017  Score=57.13  Aligned_cols=75  Identities=19%  Similarity=0.283  Sum_probs=56.5

Q ss_pred             CCCEEEEEcC-ChHHHHHHHHHHHcCCeEEEEeCCchhHHHHHHHcCCCE--EecCCCHHHHHHh-------cCCccEEE
Q 018067          183 PGMHVGVVGL-GGLGHVAVKFAKAMGVKVTVISTSPSKKSEAIERLGADS--FLVSRDQDEMQAA-------MGTMDGII  252 (361)
Q Consensus       183 ~g~~vlV~Ga-g~vG~~a~~la~~~g~~vi~~~~~~~~~~~~~~~~g~~~--vv~~~~~~~~~~~-------~~g~d~vi  252 (361)
                      .++++||.|+ |++|..+++.+...|++|+++++++++...+.+++....  ..|..+++.+.++       .+++|++|
T Consensus         8 ~~k~vlVTGas~gIG~~ia~~l~~~G~~V~~~~r~~~~~~~~~~~~~~~~~~~~Dv~d~~~v~~~~~~~~~~~g~iD~lv   87 (270)
T 1yde_A            8 AGKVVVVTGGGRGIGAGIVRAFVNSGARVVICDKDESGGRALEQELPGAVFILCDVTQEDDVKTLVSETIRRFGRLDCVV   87 (270)
T ss_dssp             TTCEEEEETCSSHHHHHHHHHHHHTTCEEEEEESCHHHHHHHHHHCTTEEEEECCTTSHHHHHHHHHHHHHHHSCCCEEE
T ss_pred             CCCEEEEECCCcHHHHHHHHHHHHCCCEEEEEeCCHHHHHHHHHHhcCCeEEEcCCCCHHHHHHHHHHHHHHcCCCCEEE
Confidence            5788999997 999999999999999999999999887766666554212  2355555544332       24799999


Q ss_pred             EcCCC
Q 018067          253 DTVSA  257 (361)
Q Consensus       253 d~~g~  257 (361)
                      +++|.
T Consensus        88 ~nAg~   92 (270)
T 1yde_A           88 NNAGH   92 (270)
T ss_dssp             ECCCC
T ss_pred             ECCCC
Confidence            99984

>3kzv_A Uncharacterized oxidoreductase YIR035C; cytoplasmic protein, unknown function, structural genomics, MCSG, protein structure initiative; 2.00A {Saccharomyces cerevisiae}

Probab=97.23  E-value=0.0023  Score=55.68  Aligned_cols=74  Identities=16%  Similarity=0.248  Sum_probs=54.7

Q ss_pred             CCEEEEEcC-ChHHHHHHHHHHHc--CCeEEEEeCCchhHHHHHHHcCCCE---EecCCCHHHHHHh-------cCCccE
Q 018067          184 GMHVGVVGL-GGLGHVAVKFAKAM--GVKVTVISTSPSKKSEAIERLGADS---FLVSRDQDEMQAA-------MGTMDG  250 (361)
Q Consensus       184 g~~vlV~Ga-g~vG~~a~~la~~~--g~~vi~~~~~~~~~~~~~~~~g~~~---vv~~~~~~~~~~~-------~~g~d~  250 (361)
                      |+++||.|+ +++|.++++.+...  |++|+.++++.++..++.++++...   ..|-.+++.+.++       .+++|+
T Consensus         2 gk~~lVTGas~GIG~aia~~l~~~g~~~~v~~~~r~~~~~~~~~~~~~~~~~~~~~Dv~~~~~v~~~~~~~~~~~g~id~   81 (254)
T 3kzv_A            2 GKVILVTGVSRGIGKSIVDVLFSLDKDTVVYGVARSEAPLKKLKEKYGDRFFYVVGDITEDSVLKQLVNAAVKGHGKIDS   81 (254)
T ss_dssp             CCEEEECSTTSHHHHHHHHHHHHHCSSCEEEEEESCHHHHHHHHHHHGGGEEEEESCTTSHHHHHHHHHHHHHHHSCCCE
T ss_pred             CCEEEEECCCchHHHHHHHHHHhcCCCeEEEEecCCHHHHHHHHHHhCCceEEEECCCCCHHHHHHHHHHHHHhcCCccE
Confidence            578999997 99999998777665  5799999999888888877776432   2355555444332       247999


Q ss_pred             EEEcCCC
Q 018067          251 IIDTVSA  257 (361)
Q Consensus       251 vid~~g~  257 (361)
                      +|+++|.
T Consensus        82 lvnnAg~   88 (254)
T 3kzv_A           82 LVANAGV   88 (254)
T ss_dssp             EEEECCC
T ss_pred             EEECCcc
Confidence            9999985

>2pd4_A Enoyl-[acyl-carrier-protein] reductase [NADH]; antibacterial target, type II fatty acid biosynthesis, enoyl-ACP-reductase, FABI; HET: NAD DCN; 2.30A {Helicobacter pylori} SCOP: c.2.1.2 PDB: 2pd3_A*

Probab=97.23  E-value=0.0021  Score=56.65  Aligned_cols=75  Identities=15%  Similarity=0.188  Sum_probs=52.9

Q ss_pred             CCCEEEEEcC---ChHHHHHHHHHHHcCCeEEEEeCCch---hHHHHHHHcCC-C-EEecCCCHHHHHHh-------cCC
Q 018067          183 PGMHVGVVGL---GGLGHVAVKFAKAMGVKVTVISTSPS---KKSEAIERLGA-D-SFLVSRDQDEMQAA-------MGT  247 (361)
Q Consensus       183 ~g~~vlV~Ga---g~vG~~a~~la~~~g~~vi~~~~~~~---~~~~~~~~~g~-~-~vv~~~~~~~~~~~-------~~g  247 (361)
                      .++++||.|+   |++|..+++.+...|++|++++++.+   ...++.+..+. . ...|..+++.+.++       .++
T Consensus         5 ~~k~vlVTGas~~~gIG~~~a~~l~~~G~~V~~~~r~~~~~~~~~~l~~~~~~~~~~~~D~~~~~~v~~~~~~~~~~~g~   84 (275)
T 2pd4_A            5 KGKKGLIVGVANNKSIAYGIAQSCFNQGATLAFTYLNESLEKRVRPIAQELNSPYVYELDVSKEEHFKSLYNSVKKDLGS   84 (275)
T ss_dssp             TTCEEEEECCCSTTSHHHHHHHHHHTTTCEEEEEESSTTTHHHHHHHHHHTTCCCEEECCTTCHHHHHHHHHHHHHHTSC
T ss_pred             CCCEEEEECCCCCCcHHHHHHHHHHHCCCEEEEEeCCHHHHHHHHHHHHhcCCcEEEEcCCCCHHHHHHHHHHHHHHcCC
Confidence            4688999985   69999999999999999999998875   33444333442 2 22355565444332       247


Q ss_pred             ccEEEEcCCC
Q 018067          248 MDGIIDTVSA  257 (361)
Q Consensus       248 ~d~vid~~g~  257 (361)
                      +|++|+++|.
T Consensus        85 id~lv~nAg~   94 (275)
T 2pd4_A           85 LDFIVHSVAF   94 (275)
T ss_dssp             EEEEEECCCC
T ss_pred             CCEEEECCcc
Confidence            9999999984

>2rhc_B Actinorhodin polyketide ketoreductase; oxidoreductase, combinatorial biosynthesis, short chain dehydrogenase/reductase; HET: NAP EMO; 2.10A {Streptomyces coelicolor} SCOP: c.2.1.2 PDB: 2rh4_A* 1w4z_A* 3csd_B* 3qrw_A* 3ri3_B* 2rhr_B* 1x7g_A* 1x7h_A* 1xr3_A*

Probab=97.22  E-value=0.0016  Score=57.52  Aligned_cols=75  Identities=19%  Similarity=0.272  Sum_probs=55.2

Q ss_pred             CCCEEEEEcC-ChHHHHHHHHHHHcCCeEEEEeCCchhHHHHHHHc---CCCE---EecCCCHHHHHHh-------cCCc
Q 018067          183 PGMHVGVVGL-GGLGHVAVKFAKAMGVKVTVISTSPSKKSEAIERL---GADS---FLVSRDQDEMQAA-------MGTM  248 (361)
Q Consensus       183 ~g~~vlV~Ga-g~vG~~a~~la~~~g~~vi~~~~~~~~~~~~~~~~---g~~~---vv~~~~~~~~~~~-------~~g~  248 (361)
                      .++++||.|+ |++|.+++..+...|++|++++++.++...+.+++   +...   ..|..+++.+.++       .+++
T Consensus        21 ~~k~vlVTGas~gIG~~ia~~l~~~G~~V~~~~r~~~~~~~~~~~l~~~~~~~~~~~~Dv~~~~~v~~~~~~~~~~~g~i  100 (277)
T 2rhc_B           21 DSEVALVTGATSGIGLEIARRLGKEGLRVFVCARGEEGLRTTLKELREAGVEADGRTCDVRSVPEIEALVAAVVERYGPV  100 (277)
T ss_dssp             TSCEEEEETCSSHHHHHHHHHHHHTTCEEEEEESCHHHHHHHHHHHHHTTCCEEEEECCTTCHHHHHHHHHHHHHHTCSC
T ss_pred             CCCEEEEECCCCHHHHHHHHHHHHCCCEEEEEeCCHHHHHHHHHHHHhcCCceEEEECCCCCHHHHHHHHHHHHHHhCCC
Confidence            4688999997 99999999999999999999999887665554443   4332   2355555443332       2479


Q ss_pred             cEEEEcCCC
Q 018067          249 DGIIDTVSA  257 (361)
Q Consensus       249 d~vid~~g~  257 (361)
                      |++|+++|.
T Consensus       101 D~lv~~Ag~  109 (277)
T 2rhc_B          101 DVLVNNAGR  109 (277)
T ss_dssp             SEEEECCCC
T ss_pred             CEEEECCCC
Confidence            999999984

>3r1i_A Short-chain type dehydrogenase/reductase; structural genomics, seattle structural genomics center for infectious disease, ssgcid; 1.95A {Mycobacterium marinum}

Probab=97.22  E-value=0.001  Score=58.77  Aligned_cols=76  Identities=14%  Similarity=0.218  Sum_probs=56.7

Q ss_pred             CCCCEEEEEcC-ChHHHHHHHHHHHcCCeEEEEeCCchhHHHHHHHc---CCC---EEecCCCHHHHHHhc-------CC
Q 018067          182 KPGMHVGVVGL-GGLGHVAVKFAKAMGVKVTVISTSPSKKSEAIERL---GAD---SFLVSRDQDEMQAAM-------GT  247 (361)
Q Consensus       182 ~~g~~vlV~Ga-g~vG~~a~~la~~~g~~vi~~~~~~~~~~~~~~~~---g~~---~vv~~~~~~~~~~~~-------~g  247 (361)
                      -.|+++||.|+ |++|.++++.+...|++|++++++.++.+.+.+++   +..   ...|..+++.++++.       ++
T Consensus        30 l~gk~~lVTGas~GIG~aia~~la~~G~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~Dl~d~~~v~~~~~~~~~~~g~  109 (276)
T 3r1i_A           30 LSGKRALITGASTGIGKKVALAYAEAGAQVAVAARHSDALQVVADEIAGVGGKALPIRCDVTQPDQVRGMLDQMTGELGG  109 (276)
T ss_dssp             CTTCEEEEESTTSHHHHHHHHHHHHTTCEEEEEESSGGGGHHHHHHHHHTTCCCEEEECCTTCHHHHHHHHHHHHHHHSC
T ss_pred             CCCCEEEEeCCCCHHHHHHHHHHHHCCCEEEEEeCCHHHHHHHHHHHHhcCCeEEEEEcCCCCHHHHHHHHHHHHHHcCC
Confidence            35789999997 99999999999999999999999988766665543   322   123555655444332       48


Q ss_pred             ccEEEEcCCC
Q 018067          248 MDGIIDTVSA  257 (361)
Q Consensus       248 ~d~vid~~g~  257 (361)
                      +|++|+++|.
T Consensus       110 iD~lvnnAg~  119 (276)
T 3r1i_A          110 IDIAVCNAGI  119 (276)
T ss_dssp             CSEEEECCCC
T ss_pred             CCEEEECCCC
Confidence            9999999985

>3t4e_A Quinate/shikimate dehydrogenase; structural genomics, center for structural genomics of infec diseases, csgid; HET: NAD; 1.95A {Salmonella enterica subsp} PDB: 1npd_A* 1o9b_A* 1vi2_A*

Probab=97.22  E-value=0.0011  Score=59.62  Aligned_cols=107  Identities=15%  Similarity=0.154  Sum_probs=68.1

Q ss_pred             hHhhhcCCCCCCCEEEEEcCChHHHHHHHHHHHcCC-eEEEEeCC---chhHHHHHHHcC----CC-EEecCCCHHHHHH
Q 018067          173 SPLRFYGLDKPGMHVGVVGLGGLGHVAVKFAKAMGV-KVTVISTS---PSKKSEAIERLG----AD-SFLVSRDQDEMQA  243 (361)
Q Consensus       173 ~~l~~~~~~~~g~~vlV~Gag~vG~~a~~la~~~g~-~vi~~~~~---~~~~~~~~~~~g----~~-~vv~~~~~~~~~~  243 (361)
                      .+|.....--.++++||+|+|++|.+++..+...|+ +|+++.|+   .++.+.++++++    .. ..++..+.+...+
T Consensus       137 ~~L~~~~~~l~gk~~lVlGAGGaaraia~~L~~~G~~~v~v~nRt~~~~~~a~~la~~~~~~~~~~v~~~~~~~l~~~~~  216 (312)
T 3t4e_A          137 RAIKESGFDMRGKTMVLLGAGGAATAIGAQAAIEGIKEIKLFNRKDDFFEKAVAFAKRVNENTDCVVTVTDLADQHAFTE  216 (312)
T ss_dssp             HHHHHTTCCCTTCEEEEECCSHHHHHHHHHHHHTTCSEEEEEECSSTHHHHHHHHHHHHHHHSSCEEEEEETTCHHHHHH
T ss_pred             HHHHhcCCCcCCCEEEEECcCHHHHHHHHHHHHcCCCEEEEEECCCchHHHHHHHHHHhhhccCcceEEechHhhhhhHh
Confidence            334443322468899999999999999999999999 89999999   666666665543    22 2334444222233


Q ss_pred             hcCCccEEEEcCCCccc--HHH----HHhccccCCEEEEecC
Q 018067          244 AMGTMDGIIDTVSAVHP--LMP----LIGLLKSQGKLVLVGA  279 (361)
Q Consensus       244 ~~~g~d~vid~~g~~~~--~~~----~~~~l~~~G~~v~~g~  279 (361)
                      ....+|+||++++....  -..    -...++++..+.++-.
T Consensus       217 ~l~~~DiIINaTp~Gm~~~~~~~~~~~~~~l~~~~~v~D~vY  258 (312)
T 3t4e_A          217 ALASADILTNGTKVGMKPLENESLIGDVSLLRPELLVTECVY  258 (312)
T ss_dssp             HHHHCSEEEECSSTTSTTSTTCCSCCCGGGSCTTCEEEECCC
T ss_pred             hccCceEEEECCcCCCCCCCCCcccCCHHHcCCCCEEEEecc
Confidence            33469999999865320  000    1245666666666644

>3qiv_A Short-chain dehydrogenase or 3-oxoacyl-[acyl-CARR protein] reductase; structural genomics; 2.25A {Mycobacterium avium subsp}

Probab=97.20  E-value=0.0017  Score=56.40  Aligned_cols=75  Identities=17%  Similarity=0.275  Sum_probs=56.4

Q ss_pred             CCCEEEEEcC-ChHHHHHHHHHHHcCCeEEEEeCCchhHHHHHHHc---CCC---EEecCCCHHHHHHh-------cCCc
Q 018067          183 PGMHVGVVGL-GGLGHVAVKFAKAMGVKVTVISTSPSKKSEAIERL---GAD---SFLVSRDQDEMQAA-------MGTM  248 (361)
Q Consensus       183 ~g~~vlV~Ga-g~vG~~a~~la~~~g~~vi~~~~~~~~~~~~~~~~---g~~---~vv~~~~~~~~~~~-------~~g~  248 (361)
                      .++++||.|+ |++|..+++.+...|++|++++++.++...+.+++   +..   ...|..+++.+.++       .+++
T Consensus         8 ~~k~vlITGas~giG~~~a~~l~~~G~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~D~~~~~~~~~~~~~~~~~~g~i   87 (253)
T 3qiv_A            8 ENKVGIVTGSGGGIGQAYAEALAREGAAVVVADINAEAAEAVAKQIVADGGTAISVAVDVSDPESAKAMADRTLAEFGGI   87 (253)
T ss_dssp             TTCEEEEETTTSHHHHHHHHHHHHTTCEEEEEESCHHHHHHHHHHHHHTTCEEEEEECCTTSHHHHHHHHHHHHHHHSCC
T ss_pred             CCCEEEEECCCChHHHHHHHHHHHCCCEEEEEcCCHHHHHHHHHHHHhcCCcEEEEEccCCCHHHHHHHHHHHHHHcCCC
Confidence            5789999998 99999999999999999999999988776665544   332   12345555444333       2489


Q ss_pred             cEEEEcCCC
Q 018067          249 DGIIDTVSA  257 (361)
Q Consensus       249 d~vid~~g~  257 (361)
                      |++|+++|.
T Consensus        88 d~li~~Ag~   96 (253)
T 3qiv_A           88 DYLVNNAAI   96 (253)
T ss_dssp             CEEEECCCC
T ss_pred             CEEEECCCc
Confidence            999999985

>2ph3_A 3-oxoacyl-[acyl carrier protein] reductase; TTHA0415, structural genomics, southea collaboratory for structural genomics, secsg; 1.91A {Thermus thermophilus HB8}

Probab=97.20  E-value=0.0019  Score=55.55  Aligned_cols=74  Identities=15%  Similarity=0.201  Sum_probs=52.2

Q ss_pred             CCEEEEEcC-ChHHHHHHHHHHHcCCeEEEE-eCCchhHHHHHHHc---CCC----EEecCCCHHHHHHh-------cCC
Q 018067          184 GMHVGVVGL-GGLGHVAVKFAKAMGVKVTVI-STSPSKKSEAIERL---GAD----SFLVSRDQDEMQAA-------MGT  247 (361)
Q Consensus       184 g~~vlV~Ga-g~vG~~a~~la~~~g~~vi~~-~~~~~~~~~~~~~~---g~~----~vv~~~~~~~~~~~-------~~g  247 (361)
                      ++++||.|+ |.+|..+++.+...|++|+++ +++.++...+.+++   +..    ...|..+.+.+.++       .++
T Consensus         1 ~k~vlITGasggiG~~~a~~l~~~G~~v~~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~D~~~~~~~~~~~~~~~~~~~~   80 (245)
T 2ph3_A            1 MRKALITGASRGIGRAIALRLAEDGFALAIHYGQNREKAEEVAEEARRRGSPLVAVLGANLLEAEAATALVHQAAEVLGG   80 (245)
T ss_dssp             CCEEEETTTTSHHHHHHHHHHHTTTCEEEEEESSCHHHHHHHHHHHHHTTCSCEEEEECCTTSHHHHHHHHHHHHHHHTC
T ss_pred             CCEEEEeCCCchHHHHHHHHHHHCCCEEEEEcCCCHHHHHHHHHHHHhcCCceEEEEeccCCCHHHHHHHHHHHHHhcCC
Confidence            357999987 999999999999999999998 77766655443332   432    12255555544433       258


Q ss_pred             ccEEEEcCCC
Q 018067          248 MDGIIDTVSA  257 (361)
Q Consensus       248 ~d~vid~~g~  257 (361)
                      +|++|+++|.
T Consensus        81 ~d~li~~Ag~   90 (245)
T 2ph3_A           81 LDTLVNNAGI   90 (245)
T ss_dssp             CCEEEECCCC
T ss_pred             CCEEEECCCC
Confidence            9999999984

>3njr_A Precorrin-6Y methylase; methyltransferase, decarboxylase, transferase; HET: SAH PG4; 2.70A {Rhodobacter capsulatus}

Probab=97.20  E-value=0.0024  Score=53.66  Aligned_cols=97  Identities=13%  Similarity=0.159  Sum_probs=67.1

Q ss_pred             CCCCCCEEEEEcCChHHHHHHHHHHHcCCeEEEEeCCchhHHHHHH---HcCCC---EEecCCCHHHHHHhcCCccEEEE
Q 018067          180 LDKPGMHVGVVGLGGLGHVAVKFAKAMGVKVTVISTSPSKKSEAIE---RLGAD---SFLVSRDQDEMQAAMGTMDGIID  253 (361)
Q Consensus       180 ~~~~g~~vlV~Gag~vG~~a~~la~~~g~~vi~~~~~~~~~~~~~~---~~g~~---~vv~~~~~~~~~~~~~g~d~vid  253 (361)
                      .++++++||-+|+|. |..++.+++. +.+|+.++.+++..+.+.+   .+|..   .++..+-.+.+. ....+|+|+.
T Consensus        52 ~~~~~~~vLDlGcG~-G~~~~~la~~-~~~v~~vD~s~~~~~~a~~~~~~~g~~~~v~~~~~d~~~~~~-~~~~~D~v~~  128 (204)
T 3njr_A           52 APRRGELLWDIGGGS-GSVSVEWCLA-GGRAITIEPRADRIENIQKNIDTYGLSPRMRAVQGTAPAALA-DLPLPEAVFI  128 (204)
T ss_dssp             CCCTTCEEEEETCTT-CHHHHHHHHT-TCEEEEEESCHHHHHHHHHHHHHTTCTTTEEEEESCTTGGGT-TSCCCSEEEE
T ss_pred             CCCCCCEEEEecCCC-CHHHHHHHHc-CCEEEEEeCCHHHHHHHHHHHHHcCCCCCEEEEeCchhhhcc-cCCCCCEEEE
Confidence            368899999999986 8888888888 8899999999876654433   34543   222222222111 1247999987


Q ss_pred             cCCCcc-cHHHHHhccccCCEEEEecC
Q 018067          254 TVSAVH-PLMPLIGLLKSQGKLVLVGA  279 (361)
Q Consensus       254 ~~g~~~-~~~~~~~~l~~~G~~v~~g~  279 (361)
                      ..+... .+..+.+.|+++|+++....
T Consensus       129 ~~~~~~~~l~~~~~~LkpgG~lv~~~~  155 (204)
T 3njr_A          129 GGGGSQALYDRLWEWLAPGTRIVANAV  155 (204)
T ss_dssp             CSCCCHHHHHHHHHHSCTTCEEEEEEC
T ss_pred             CCcccHHHHHHHHHhcCCCcEEEEEec
Confidence            654432 57888899999999988754

>1hdo_A Biliverdin IX beta reductase; foetal metabolism, HAEM degradation, flavin reductase, diaphorase, green HAEM binding protein; HET: NAP; 1.15A {Homo sapiens} SCOP: c.2.1.2 PDB: 1he2_A* 1he3_A* 1he4_A* 1he5_A*

Probab=97.20  E-value=0.00072  Score=56.39  Aligned_cols=95  Identities=16%  Similarity=0.203  Sum_probs=65.4

Q ss_pred             CEEEEEcC-ChHHHHHHHHHHHcCCeEEEEeCCchhHHHHHHHcCCCE-EecCCCHHHHHHhcCCccEEEEcCCCccc--
Q 018067          185 MHVGVVGL-GGLGHVAVKFAKAMGVKVTVISTSPSKKSEAIERLGADS-FLVSRDQDEMQAAMGTMDGIIDTVSAVHP--  260 (361)
Q Consensus       185 ~~vlV~Ga-g~vG~~a~~la~~~g~~vi~~~~~~~~~~~~~~~~g~~~-vv~~~~~~~~~~~~~g~d~vid~~g~~~~--  260 (361)
                      .+|||+|+ |.+|..+++.+...|.+|++++++.++.... ...+... ..|..+++.+.++..++|+||+++|....  
T Consensus         4 ~~ilVtGatG~iG~~l~~~l~~~g~~V~~~~r~~~~~~~~-~~~~~~~~~~D~~~~~~~~~~~~~~d~vi~~a~~~~~~~   82 (206)
T 1hdo_A            4 KKIAIFGATGQTGLTTLAQAVQAGYEVTVLVRDSSRLPSE-GPRPAHVVVGDVLQAADVDKTVAGQDAVIVLLGTRNDLS   82 (206)
T ss_dssp             CEEEEESTTSHHHHHHHHHHHHTTCEEEEEESCGGGSCSS-SCCCSEEEESCTTSHHHHHHHHTTCSEEEECCCCTTCCS
T ss_pred             CEEEEEcCCcHHHHHHHHHHHHCCCeEEEEEeChhhcccc-cCCceEEEEecCCCHHHHHHHHcCCCEEEECccCCCCCC
Confidence            68999998 9999999999999999999999987653221 0112221 23556667777777789999999986431  


Q ss_pred             --------HHHHHhcccc--CCEEEEecCC
Q 018067          261 --------LMPLIGLLKS--QGKLVLVGAP  280 (361)
Q Consensus       261 --------~~~~~~~l~~--~G~~v~~g~~  280 (361)
                              ....++.++.  .++++.++..
T Consensus        83 ~~~~n~~~~~~~~~~~~~~~~~~~v~~Ss~  112 (206)
T 1hdo_A           83 PTTVMSEGARNIVAAMKAHGVDKVVACTSA  112 (206)
T ss_dssp             CCCHHHHHHHHHHHHHHHHTCCEEEEECCG
T ss_pred             ccchHHHHHHHHHHHHHHhCCCeEEEEeee
Confidence                    2333444432  3688888753

>3is3_A 17BETA-hydroxysteroid dehydrogenase; short chain dehydrogenase/REDU SDR, fungi, oxidoreductase; HET: GOL; 1.48A {Cochliobolus lunatus} PDB: 3qwf_A* 3qwh_A* 3qwi_A* 3itd_A

Probab=97.18  E-value=0.004  Score=54.61  Aligned_cols=100  Identities=21%  Similarity=0.276  Sum_probs=68.2

Q ss_pred             CCCCEEEEEcC-ChHHHHHHHHHHHcCCeEEEEeCCch-hHHHHH---HHcCCCE---EecCCCHHHHHHh-------cC
Q 018067          182 KPGMHVGVVGL-GGLGHVAVKFAKAMGVKVTVISTSPS-KKSEAI---ERLGADS---FLVSRDQDEMQAA-------MG  246 (361)
Q Consensus       182 ~~g~~vlV~Ga-g~vG~~a~~la~~~g~~vi~~~~~~~-~~~~~~---~~~g~~~---vv~~~~~~~~~~~-------~~  246 (361)
                      -.|+++||.|+ +++|.++++.+...|++|+++++..+ ..+.+.   +..+.+.   ..|-.+++.+.++       .+
T Consensus        16 l~~k~~lVTGas~gIG~aia~~l~~~G~~V~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~Dv~~~~~v~~~~~~~~~~~g   95 (270)
T 3is3_A           16 LDGKVALVTGSGRGIGAAVAVHLGRLGAKVVVNYANSTKDAEKVVSEIKALGSDAIAIKADIRQVPEIVKLFDQAVAHFG   95 (270)
T ss_dssp             CTTCEEEESCTTSHHHHHHHHHHHHTTCEEEEEESSCHHHHHHHHHHHHHTTCCEEEEECCTTSHHHHHHHHHHHHHHHS
T ss_pred             cCCCEEEEECCCchHHHHHHHHHHHCCCEEEEEcCCCHHHHHHHHHHHHhcCCcEEEEEcCCCCHHHHHHHHHHHHHHcC
Confidence            35789999987 99999999999999999998776543 333332   3345432   2345555443332       24


Q ss_pred             CccEEEEcCCCcc-------------------------cHHHHHhccccCCEEEEecCCC
Q 018067          247 TMDGIIDTVSAVH-------------------------PLMPLIGLLKSQGKLVLVGAPE  281 (361)
Q Consensus       247 g~d~vid~~g~~~-------------------------~~~~~~~~l~~~G~~v~~g~~~  281 (361)
                      ++|++|+++|...                         ..+.++..++++|+++.+++..
T Consensus        96 ~id~lvnnAg~~~~~~~~~~~~~~~~~~~~~N~~g~~~~~~~~~~~~~~~g~iv~isS~~  155 (270)
T 3is3_A           96 HLDIAVSNSGVVSFGHLKDVTEEEFDRVFSLNTRGQFFVAREAYRHLTEGGRIVLTSSNT  155 (270)
T ss_dssp             CCCEEECCCCCCCCCCGGGCCHHHHHHHHHHHTHHHHHHHHHHHHHCCTTCEEEEECCTT
T ss_pred             CCCEEEECCCCCCCCCcccCCHHHHHHHHHHHhHHHHHHHHHHHHHHhcCCeEEEEeCch
Confidence            7999999998521                         2344566777899999998754

>3rku_A Oxidoreductase YMR226C; substrate fingerprint, short chain oxidoreductase, rossmann oxidoreductase; HET: NAP; 2.60A {Saccharomyces cerevisiae}

Probab=97.18  E-value=0.0033  Score=55.81  Aligned_cols=75  Identities=13%  Similarity=0.170  Sum_probs=54.1

Q ss_pred             CCCEEEEEcC-ChHHHHHHHHHHHcCC---eEEEEeCCchhHHHHHHHc-----CCCE---EecCCCHHHHHHhc-----
Q 018067          183 PGMHVGVVGL-GGLGHVAVKFAKAMGV---KVTVISTSPSKKSEAIERL-----GADS---FLVSRDQDEMQAAM-----  245 (361)
Q Consensus       183 ~g~~vlV~Ga-g~vG~~a~~la~~~g~---~vi~~~~~~~~~~~~~~~~-----g~~~---vv~~~~~~~~~~~~-----  245 (361)
                      .|+++||.|+ |++|.+++..+...|+   +|++++++.++.+++.+++     +...   ..|..+++.+.++.     
T Consensus        32 ~~k~~lVTGas~GIG~aia~~l~~~G~~~~~V~~~~r~~~~~~~~~~~l~~~~~~~~~~~~~~Dv~d~~~v~~~~~~~~~  111 (287)
T 3rku_A           32 AKKTVLITGASAGIGKATALEYLEASNGDMKLILAARRLEKLEELKKTIDQEFPNAKVHVAQLDITQAEKIKPFIENLPQ  111 (287)
T ss_dssp             TTCEEEEESTTSHHHHHHHHHHHHHHTTCSEEEEEESCHHHHHHHHHHHHHHCTTCEEEEEECCTTCGGGHHHHHHTSCG
T ss_pred             CCCEEEEecCCChHHHHHHHHHHHcCCCCceEEEEECCHHHHHHHHHHHHhhCCCCeEEEEECCCCCHHHHHHHHHHHHH
Confidence            4688999997 9999999988777776   9999999988776665544     3321   23555555444332     


Q ss_pred             --CCccEEEEcCCC
Q 018067          246 --GTMDGIIDTVSA  257 (361)
Q Consensus       246 --~g~d~vid~~g~  257 (361)
                        +++|++|+++|.
T Consensus       112 ~~g~iD~lVnnAG~  125 (287)
T 3rku_A          112 EFKDIDILVNNAGK  125 (287)
T ss_dssp             GGCSCCEEEECCCC
T ss_pred             hcCCCCEEEECCCc
Confidence              379999999984

>2bka_A CC3, TAT-interacting protein TIP30; NADPH, PEG600, transcription; HET: NDP PE8; 1.7A {Homo sapiens} SCOP: c.2.1.2 PDB: 2fmu_A

Probab=97.17  E-value=0.00057  Score=58.81  Aligned_cols=98  Identities=18%  Similarity=0.161  Sum_probs=64.9

Q ss_pred             CCCEEEEEcC-ChHHHHHHHHHHHcCC--eEEEEeCCchhHHHHHHHcCCCE-EecCCCHHHHHHhcCCccEEEEcCCCc
Q 018067          183 PGMHVGVVGL-GGLGHVAVKFAKAMGV--KVTVISTSPSKKSEAIERLGADS-FLVSRDQDEMQAAMGTMDGIIDTVSAV  258 (361)
Q Consensus       183 ~g~~vlV~Ga-g~vG~~a~~la~~~g~--~vi~~~~~~~~~~~~~~~~g~~~-vv~~~~~~~~~~~~~g~d~vid~~g~~  258 (361)
                      .+.+|||.|+ |.+|..+++.+...|+  +|+++++++++..... .-++.. ..|..+++.+.++..++|++|+++|..
T Consensus        17 ~~~~vlVtGasg~iG~~l~~~L~~~G~~~~V~~~~r~~~~~~~~~-~~~~~~~~~D~~d~~~~~~~~~~~d~vi~~ag~~   95 (242)
T 2bka_A           17 QNKSVFILGASGETGRVLLKEILEQGLFSKVTLIGRRKLTFDEEA-YKNVNQEVVDFEKLDDYASAFQGHDVGFCCLGTT   95 (242)
T ss_dssp             TCCEEEEECTTSHHHHHHHHHHHHHTCCSEEEEEESSCCCCCSGG-GGGCEEEECCGGGGGGGGGGGSSCSEEEECCCCC
T ss_pred             cCCeEEEECCCcHHHHHHHHHHHcCCCCCEEEEEEcCCCCccccc-cCCceEEecCcCCHHHHHHHhcCCCEEEECCCcc
Confidence            3578999997 9999999999999999  9999998875432221 112221 234445555556666899999999864


Q ss_pred             c--------------cHHHHHhcccc--CCEEEEecCCC
Q 018067          259 H--------------PLMPLIGLLKS--QGKLVLVGAPE  281 (361)
Q Consensus       259 ~--------------~~~~~~~~l~~--~G~~v~~g~~~  281 (361)
                      .              .....++.+++  .++++.++...
T Consensus        96 ~~~~~~~~~~~~n~~~~~~~~~~~~~~~~~~iv~~SS~~  134 (242)
T 2bka_A           96 RGKAGAEGFVRVDRDYVLKSAELAKAGGCKHFNLLSSKG  134 (242)
T ss_dssp             HHHHHHHHHHHHHTHHHHHHHHHHHHTTCCEEEEECCTT
T ss_pred             cccCCcccceeeeHHHHHHHHHHHHHCCCCEEEEEccCc
Confidence            2              11223334433  36999988643

>2x9g_A PTR1, pteridine reductase; short chain dehydrogenase, oxidoreductase; HET: NAP LYA; 1.10A {Trypanosoma brucei brucei} PDB: 2x9n_A* 2x9v_A* 3bmc_A* 3bmd_A* 3bme_A* 3bmf_A* 3bmg_A* 3bmh_A* 3bmi_A* 3bmj_A* 3bmk_A* 3bml_A* 3bmm_A* 3bmn_A* 3bmo_A* 3bmq_A* 3bmr_A* 3gn1_A* 3gn2_A* 3jq6_A* ...

Probab=97.17  E-value=0.0022  Score=56.94  Aligned_cols=75  Identities=13%  Similarity=0.155  Sum_probs=54.0

Q ss_pred             CCCEEEEEcC-ChHHHHHHHHHHHcCCeEEEEeCCc-hhHHHHHHHc----CCCE---EecCCC----HHHHHHh-----
Q 018067          183 PGMHVGVVGL-GGLGHVAVKFAKAMGVKVTVISTSP-SKKSEAIERL----GADS---FLVSRD----QDEMQAA-----  244 (361)
Q Consensus       183 ~g~~vlV~Ga-g~vG~~a~~la~~~g~~vi~~~~~~-~~~~~~~~~~----g~~~---vv~~~~----~~~~~~~-----  244 (361)
                      .++++||.|+ |++|.++++.+...|++|++++++. ++...+.+++    +...   ..|..+    .+.+.++     
T Consensus        22 ~~k~~lVTGas~gIG~aia~~L~~~G~~V~~~~r~~~~~~~~~~~~l~~~~~~~~~~~~~Dv~~~~~~~~~v~~~~~~~~  101 (288)
T 2x9g_A           22 EAPAAVVTGAAKRIGRAIAVKLHQTGYRVVIHYHNSAEAAVSLADELNKERSNTAVVCQADLTNSNVLPASCEEIINSCF  101 (288)
T ss_dssp             CCCEEEETTCSSHHHHHHHHHHHHHTCEEEEEESSCHHHHHHHHHHHHHHSTTCEEEEECCCSCSTTHHHHHHHHHHHHH
T ss_pred             CCCEEEEeCCCCHHHHHHHHHHHHCCCeEEEEeCCchHHHHHHHHHHHhhcCCceEEEEeecCCccCCHHHHHHHHHHHH
Confidence            4688999997 9999999999999999999999987 6655544432    4321   235555    5443332     


Q ss_pred             --cCCccEEEEcCCC
Q 018067          245 --MGTMDGIIDTVSA  257 (361)
Q Consensus       245 --~~g~d~vid~~g~  257 (361)
                        .+++|++|+++|.
T Consensus       102 ~~~g~iD~lvnnAG~  116 (288)
T 2x9g_A          102 RAFGRCDVLVNNASA  116 (288)
T ss_dssp             HHHSCCCEEEECCCC
T ss_pred             HhcCCCCEEEECCCC
Confidence              2479999999984

>3oid_A Enoyl-[acyl-carrier-protein] reductase [NADPH]; fatty acid synthesis, enoyl-ACP reductases, FABL, rossmann-L NADPH binding, oxidoreductase; HET: TCL NDP; 1.80A {Bacillus subtilis} PDB: 3oic_A*

Probab=97.17  E-value=0.0025  Score=55.57  Aligned_cols=75  Identities=16%  Similarity=0.235  Sum_probs=53.9

Q ss_pred             CCCEEEEEcC-ChHHHHHHHHHHHcCCeEEEE-eCCchhHHHHHHHc---CCCE---EecCCCHHHHHHh-------cCC
Q 018067          183 PGMHVGVVGL-GGLGHVAVKFAKAMGVKVTVI-STSPSKKSEAIERL---GADS---FLVSRDQDEMQAA-------MGT  247 (361)
Q Consensus       183 ~g~~vlV~Ga-g~vG~~a~~la~~~g~~vi~~-~~~~~~~~~~~~~~---g~~~---vv~~~~~~~~~~~-------~~g  247 (361)
                      .++++||.|+ |++|.++++.+...|++|+++ .++.++...+.+++   +...   ..|-.+++.++++       .++
T Consensus         3 ~~k~vlVTGas~gIG~aia~~l~~~G~~vv~~~~r~~~~~~~~~~~~~~~~~~~~~~~~Dv~~~~~v~~~~~~~~~~~g~   82 (258)
T 3oid_A            3 QNKCALVTGSSRGVGKAAAIRLAENGYNIVINYARSKKAALETAEEIEKLGVKVLVVKANVGQPAKIKEMFQQIDETFGR   82 (258)
T ss_dssp             CCCEEEESSCSSHHHHHHHHHHHHTTCEEEEEESSCHHHHHHHHHHHHTTTCCEEEEECCTTCHHHHHHHHHHHHHHHSC
T ss_pred             CCCEEEEecCCchHHHHHHHHHHHCCCEEEEEcCCCHHHHHHHHHHHHhcCCcEEEEEcCCCCHHHHHHHHHHHHHHcCC
Confidence            5788999987 999999999999999999987 77766655554443   4332   2355555444332       247


Q ss_pred             ccEEEEcCCC
Q 018067          248 MDGIIDTVSA  257 (361)
Q Consensus       248 ~d~vid~~g~  257 (361)
                      +|++|+++|.
T Consensus        83 id~lv~nAg~   92 (258)
T 3oid_A           83 LDVFVNNAAS   92 (258)
T ss_dssp             CCEEEECCCC
T ss_pred             CCEEEECCCC
Confidence            9999999984

>2axq_A Saccharopine dehydrogenase; rossmann fold variant, saccharopine reductase fold (domain II), alpha/beta protein; 1.70A {Saccharomyces cerevisiae}

Probab=97.17  E-value=0.001  Score=63.23  Aligned_cols=97  Identities=14%  Similarity=0.174  Sum_probs=68.4

Q ss_pred             CCCEEEEEcCChHHHHHHHHHHHc-CCeEEEEeCCchhHHHHHHHcCCCE-EecCCCHHHHHHhcCCccEEEEcCCCccc
Q 018067          183 PGMHVGVVGLGGLGHVAVKFAKAM-GVKVTVISTSPSKKSEAIERLGADS-FLVSRDQDEMQAAMGTMDGIIDTVSAVHP  260 (361)
Q Consensus       183 ~g~~vlV~Gag~vG~~a~~la~~~-g~~vi~~~~~~~~~~~~~~~~g~~~-vv~~~~~~~~~~~~~g~d~vid~~g~~~~  260 (361)
                      .+.+|+|+|+|.+|..++..+... +.+|++++++.++...+++..+... .++..+.+.+.++..++|+||++++....
T Consensus        22 ~~k~VlIiGAGgiG~aia~~L~~~~g~~V~v~~R~~~ka~~la~~~~~~~~~~D~~d~~~l~~~l~~~DvVIn~tp~~~~  101 (467)
T 2axq_A           22 MGKNVLLLGSGFVAQPVIDTLAANDDINVTVACRTLANAQALAKPSGSKAISLDVTDDSALDKVLADNDVVISLIPYTFH  101 (467)
T ss_dssp             -CEEEEEECCSTTHHHHHHHHHTSTTEEEEEEESSHHHHHHHHGGGTCEEEECCTTCHHHHHHHHHTSSEEEECSCGGGH
T ss_pred             CCCEEEEECChHHHHHHHHHHHhCCCCeEEEEECCHHHHHHHHHhcCCcEEEEecCCHHHHHHHHcCCCEEEECCchhhh
Confidence            456899999999999999988877 6799999998887777755444432 34555555555555689999999987532


Q ss_pred             HHHHHhccccCCEEEEecC
Q 018067          261 LMPLIGLLKSQGKLVLVGA  279 (361)
Q Consensus       261 ~~~~~~~l~~~G~~v~~g~  279 (361)
                      ......+++.+-.++....
T Consensus       102 ~~v~~a~l~~g~~vvd~~~  120 (467)
T 2axq_A          102 PNVVKSAIRTKTDVVTSSY  120 (467)
T ss_dssp             HHHHHHHHHHTCEEEECSC
T ss_pred             HHHHHHHHhcCCEEEEeec
Confidence            2334455667777776543

>2nwq_A Probable short-chain dehydrogenase; oxidoreductase; 2.30A {Pseudomonas aeruginosa}

Probab=97.17  E-value=0.002  Score=56.77  Aligned_cols=73  Identities=21%  Similarity=0.303  Sum_probs=55.2

Q ss_pred             CEEEEEcC-ChHHHHHHHHHHHcCCeEEEEeCCchhHHHHHHHcCC--C---EEecCCCHHHHHHhc-------CCccEE
Q 018067          185 MHVGVVGL-GGLGHVAVKFAKAMGVKVTVISTSPSKKSEAIERLGA--D---SFLVSRDQDEMQAAM-------GTMDGI  251 (361)
Q Consensus       185 ~~vlV~Ga-g~vG~~a~~la~~~g~~vi~~~~~~~~~~~~~~~~g~--~---~vv~~~~~~~~~~~~-------~g~d~v  251 (361)
                      +++||.|+ |++|.++++.+...|++|++++++.++...+.+++..  .   ...|..+++.+.++.       +++|++
T Consensus        22 k~vlVTGas~gIG~aia~~La~~G~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~Dv~d~~~v~~~~~~~~~~~g~iD~l  101 (272)
T 2nwq_A           22 STLFITGATSGFGEACARRFAEAGWSLVLTGRREERLQALAGELSAKTRVLPLTLDVRDRAAMSAAVDNLPEEFATLRGL  101 (272)
T ss_dssp             CEEEESSTTTSSHHHHHHHHHHTTCEEEEEESCHHHHHHHHHHHTTTSCEEEEECCTTCHHHHHHHHHTCCGGGSSCCEE
T ss_pred             cEEEEeCCCCHHHHHHHHHHHHCCCEEEEEECCHHHHHHHHHHhhcCCcEEEEEcCCCCHHHHHHHHHHHHHHhCCCCEE
Confidence            68999987 9999999999999999999999998877776665532  1   123556665544432       368999


Q ss_pred             EEcCCC
Q 018067          252 IDTVSA  257 (361)
Q Consensus       252 id~~g~  257 (361)
                      |+++|.
T Consensus       102 vnnAG~  107 (272)
T 2nwq_A          102 INNAGL  107 (272)
T ss_dssp             EECCCC
T ss_pred             EECCCC
Confidence            999985

>3sc4_A Short chain dehydrogenase (A0QTM2 homolog); ssgcid, NIH, niaid, SBRI, UW, emerald biostructures, structu genomics; 2.50A {Mycobacterium thermoresistibile}

Probab=97.16  E-value=0.0043  Score=54.94  Aligned_cols=75  Identities=28%  Similarity=0.334  Sum_probs=53.1

Q ss_pred             CCCEEEEEcC-ChHHHHHHHHHHHcCCeEEEEeCCchh-------HHHHH---HHcCCCE---EecCCCHHHHHHh----
Q 018067          183 PGMHVGVVGL-GGLGHVAVKFAKAMGVKVTVISTSPSK-------KSEAI---ERLGADS---FLVSRDQDEMQAA----  244 (361)
Q Consensus       183 ~g~~vlV~Ga-g~vG~~a~~la~~~g~~vi~~~~~~~~-------~~~~~---~~~g~~~---vv~~~~~~~~~~~----  244 (361)
                      .++++||.|+ +++|.++++.+...|++|++++++.++       ..+..   +..+...   ..|-.+++.+.++    
T Consensus         8 ~~k~vlVTGas~GIG~aia~~l~~~G~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~Dv~~~~~v~~~~~~~   87 (285)
T 3sc4_A            8 RGKTMFISGGSRGIGLAIAKRVAADGANVALVAKSAEPHPKLPGTIYTAAKEIEEAGGQALPIVGDIRDGDAVAAAVAKT   87 (285)
T ss_dssp             TTCEEEEESCSSHHHHHHHHHHHTTTCEEEEEESCCSCCSSSCCCHHHHHHHHHHHTSEEEEEECCTTSHHHHHHHHHHH
T ss_pred             CCCEEEEECCCCHHHHHHHHHHHHCCCEEEEEECChhhhhhhhHHHHHHHHHHHhcCCcEEEEECCCCCHHHHHHHHHHH
Confidence            5788999997 999999999999999999999998752       22222   3334432   2255565443332    


Q ss_pred             ---cCCccEEEEcCCC
Q 018067          245 ---MGTMDGIIDTVSA  257 (361)
Q Consensus       245 ---~~g~d~vid~~g~  257 (361)
                         .+++|++|+++|.
T Consensus        88 ~~~~g~id~lvnnAg~  103 (285)
T 3sc4_A           88 VEQFGGIDICVNNASA  103 (285)
T ss_dssp             HHHHSCCSEEEECCCC
T ss_pred             HHHcCCCCEEEECCCC
Confidence               2489999999985

>4dmm_A 3-oxoacyl-[acyl-carrier-protein] reductase; rossmann fold, oxoacyl-ACP reductase, NADP binding, fatty AC biosynthsis, oxidoreductase; HET: NAP; 2.38A {Synechococcus elongatus} PDB: 4dml_A*

Probab=97.16  E-value=0.002  Score=56.68  Aligned_cols=75  Identities=21%  Similarity=0.278  Sum_probs=52.5

Q ss_pred             CCCEEEEEcC-ChHHHHHHHHHHHcCCeEEEEeC-CchhHHHHHH---HcCCCE---EecCCCHHHHHHh-------cCC
Q 018067          183 PGMHVGVVGL-GGLGHVAVKFAKAMGVKVTVIST-SPSKKSEAIE---RLGADS---FLVSRDQDEMQAA-------MGT  247 (361)
Q Consensus       183 ~g~~vlV~Ga-g~vG~~a~~la~~~g~~vi~~~~-~~~~~~~~~~---~~g~~~---vv~~~~~~~~~~~-------~~g  247 (361)
                      .++++||.|+ |++|.++++.+...|++|+++++ +.++...+.+   ..+...   ..|..+++.+.++       .++
T Consensus        27 ~~k~vlVTGas~gIG~aia~~la~~G~~V~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~D~~d~~~v~~~~~~~~~~~g~  106 (269)
T 4dmm_A           27 TDRIALVTGASRGIGRAIALELAAAGAKVAVNYASSAGAADEVVAAIAAAGGEAFAVKADVSQESEVEALFAAVIERWGR  106 (269)
T ss_dssp             TTCEEEETTCSSHHHHHHHHHHHHTTCEEEEEESSCHHHHHHHHHHHHHTTCCEEEEECCTTSHHHHHHHHHHHHHHHSC
T ss_pred             CCCEEEEECCCCHHHHHHHHHHHHCCCEEEEEeCCChHHHHHHHHHHHhcCCcEEEEECCCCCHHHHHHHHHHHHHHcCC
Confidence            5788999987 99999999999999999999888 4444333333   334332   2355555444332       248


Q ss_pred             ccEEEEcCCC
Q 018067          248 MDGIIDTVSA  257 (361)
Q Consensus       248 ~d~vid~~g~  257 (361)
                      +|++|+++|.
T Consensus       107 id~lv~nAg~  116 (269)
T 4dmm_A          107 LDVLVNNAGI  116 (269)
T ss_dssp             CCEEEECCCC
T ss_pred             CCEEEECCCC
Confidence            9999999985

>3pk0_A Short-chain dehydrogenase/reductase SDR; ssgcid, structural genomics, seattle structural genomics CEN infectious disease; 1.75A {Mycobacterium smegmatis} SCOP: c.2.1.0

Probab=97.15  E-value=0.00095  Score=58.44  Aligned_cols=75  Identities=21%  Similarity=0.282  Sum_probs=55.7

Q ss_pred             CCCEEEEEcC-ChHHHHHHHHHHHcCCeEEEEeCCchhHHHHHHHc---C-CC---EEecCCCHHHHHHh-------cCC
Q 018067          183 PGMHVGVVGL-GGLGHVAVKFAKAMGVKVTVISTSPSKKSEAIERL---G-AD---SFLVSRDQDEMQAA-------MGT  247 (361)
Q Consensus       183 ~g~~vlV~Ga-g~vG~~a~~la~~~g~~vi~~~~~~~~~~~~~~~~---g-~~---~vv~~~~~~~~~~~-------~~g  247 (361)
                      .|+++||.|+ |++|.++++.+...|++|++++++.++.+.+.+++   + ..   ...|-.+++.+.++       .++
T Consensus         9 ~~k~vlVTGas~gIG~aia~~l~~~G~~V~~~~r~~~~~~~~~~~l~~~~~~~~~~~~~Dv~~~~~v~~~~~~~~~~~g~   88 (262)
T 3pk0_A            9 QGRSVVVTGGTKGIGRGIATVFARAGANVAVAGRSTADIDACVADLDQLGSGKVIGVQTDVSDRAQCDALAGRAVEEFGG   88 (262)
T ss_dssp             TTCEEEETTCSSHHHHHHHHHHHHTTCEEEEEESCHHHHHHHHHHHHTTSSSCEEEEECCTTSHHHHHHHHHHHHHHHSC
T ss_pred             CCCEEEEECCCcHHHHHHHHHHHHCCCEEEEEeCCHHHHHHHHHHHHhhCCCcEEEEEcCCCCHHHHHHHHHHHHHHhCC
Confidence            5789999987 99999999999999999999999988766665544   2 12   12355555444332       248


Q ss_pred             ccEEEEcCCC
Q 018067          248 MDGIIDTVSA  257 (361)
Q Consensus       248 ~d~vid~~g~  257 (361)
                      +|++|+++|.
T Consensus        89 id~lvnnAg~   98 (262)
T 3pk0_A           89 IDVVCANAGV   98 (262)
T ss_dssp             CSEEEECCCC
T ss_pred             CCEEEECCCC
Confidence            9999999984

>3rih_A Short chain dehydrogenase or reductase; structural genomics, seattle structural genomics center for infectious disease, ssgcid; HET: PG5; 2.15A {Mycobacterium abscessus}

Probab=97.15  E-value=0.0016  Score=58.08  Aligned_cols=75  Identities=24%  Similarity=0.297  Sum_probs=56.9

Q ss_pred             CCCEEEEEcC-ChHHHHHHHHHHHcCCeEEEEeCCchhHHHHHHHcCC----C---EEecCCCHHHHHHh-------cCC
Q 018067          183 PGMHVGVVGL-GGLGHVAVKFAKAMGVKVTVISTSPSKKSEAIERLGA----D---SFLVSRDQDEMQAA-------MGT  247 (361)
Q Consensus       183 ~g~~vlV~Ga-g~vG~~a~~la~~~g~~vi~~~~~~~~~~~~~~~~g~----~---~vv~~~~~~~~~~~-------~~g  247 (361)
                      .++++||.|+ |++|.++++.+...|++|++++++.++...+.+++..    .   ...|-.+++.+.++       .++
T Consensus        40 ~~k~vlVTGas~GIG~aia~~la~~G~~V~~~~r~~~~~~~~~~~l~~~~~~~~~~~~~Dv~d~~~v~~~~~~~~~~~g~  119 (293)
T 3rih_A           40 SARSVLVTGGTKGIGRGIATVFARAGANVAVAARSPRELSSVTAELGELGAGNVIGVRLDVSDPGSCADAARTVVDAFGA  119 (293)
T ss_dssp             TTCEEEETTTTSHHHHHHHHHHHHTTCEEEEEESSGGGGHHHHHHHTTSSSSCEEEEECCTTCHHHHHHHHHHHHHHHSC
T ss_pred             CCCEEEEeCCCcHHHHHHHHHHHHCCCEEEEEECCHHHHHHHHHHHHhhCCCcEEEEEEeCCCHHHHHHHHHHHHHHcCC
Confidence            5788999987 9999999999999999999999998887777666532    1   12355555443332       257


Q ss_pred             ccEEEEcCCC
Q 018067          248 MDGIIDTVSA  257 (361)
Q Consensus       248 ~d~vid~~g~  257 (361)
                      +|++|+++|.
T Consensus       120 iD~lvnnAg~  129 (293)
T 3rih_A          120 LDVVCANAGI  129 (293)
T ss_dssp             CCEEEECCCC
T ss_pred             CCEEEECCCC
Confidence            9999999984

>3v8b_A Putative dehydrogenase, possibly 3-oxoacyl-[acyl- protein] reductase; PSI-biology, structural genomics, protein structure initiati nysgrc; 2.70A {Sinorhizobium meliloti}

Probab=97.15  E-value=0.0019  Score=57.23  Aligned_cols=75  Identities=19%  Similarity=0.287  Sum_probs=56.8

Q ss_pred             CCCEEEEEcC-ChHHHHHHHHHHHcCCeEEEEeCCchhHHHHHHHcC---CCE---EecCCCHHHHHHh-------cCCc
Q 018067          183 PGMHVGVVGL-GGLGHVAVKFAKAMGVKVTVISTSPSKKSEAIERLG---ADS---FLVSRDQDEMQAA-------MGTM  248 (361)
Q Consensus       183 ~g~~vlV~Ga-g~vG~~a~~la~~~g~~vi~~~~~~~~~~~~~~~~g---~~~---vv~~~~~~~~~~~-------~~g~  248 (361)
                      +++++||.|+ |++|.++++.+...|++|++++++.++..++.+++.   ...   ..|..+++.+.++       .+++
T Consensus        27 ~~k~~lVTGas~GIG~aia~~la~~G~~V~~~~r~~~~~~~~~~~l~~~~~~~~~~~~Dv~d~~~v~~~~~~~~~~~g~i  106 (283)
T 3v8b_A           27 PSPVALITGAGSGIGRATALALAADGVTVGALGRTRTEVEEVADEIVGAGGQAIALEADVSDELQMRNAVRDLVLKFGHL  106 (283)
T ss_dssp             CCCEEEEESCSSHHHHHHHHHHHHTTCEEEEEESSHHHHHHHHHHHTTTTCCEEEEECCTTCHHHHHHHHHHHHHHHSCC
T ss_pred             CCCEEEEECCCCHHHHHHHHHHHHCCCEEEEEeCCHHHHHHHHHHHHhcCCcEEEEEccCCCHHHHHHHHHHHHHHhCCC
Confidence            5788999997 999999999999999999999999888777766653   221   2355555443332       2489


Q ss_pred             cEEEEcCCC
Q 018067          249 DGIIDTVSA  257 (361)
Q Consensus       249 d~vid~~g~  257 (361)
                      |++|+++|.
T Consensus       107 D~lVnnAg~  115 (283)
T 3v8b_A          107 DIVVANAGI  115 (283)
T ss_dssp             CEEEECCCC
T ss_pred             CEEEECCCC
Confidence            999999985

>3sx2_A Putative 3-ketoacyl-(acyl-carrier-protein) reduct; ssgcid, 3-ketoacyl-(acyl-carrier-protein) reductase, mycobac paratuberculosis; HET: NAD; 1.50A {Mycobacterium avium subsp}

Probab=97.15  E-value=0.002  Score=56.78  Aligned_cols=76  Identities=20%  Similarity=0.334  Sum_probs=53.4

Q ss_pred             CCCCEEEEEcC-ChHHHHHHHHHHHcCCeEEEEeCC------------chhHHHHH---HHcCCCE---EecCCCHHHHH
Q 018067          182 KPGMHVGVVGL-GGLGHVAVKFAKAMGVKVTVISTS------------PSKKSEAI---ERLGADS---FLVSRDQDEMQ  242 (361)
Q Consensus       182 ~~g~~vlV~Ga-g~vG~~a~~la~~~g~~vi~~~~~------------~~~~~~~~---~~~g~~~---vv~~~~~~~~~  242 (361)
                      -.|+++||.|+ |++|.+++..+...|++|++++++            .++.....   +..+...   ..|-.+++.+.
T Consensus        11 l~gk~vlVTGas~gIG~~ia~~l~~~G~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~D~~~~~~v~   90 (278)
T 3sx2_A           11 LTGKVAFITGAARGQGRAHAVRLAADGADIIAVDLCDQIASVPYPLATPEELAATVKLVEDIGSRIVARQADVRDRESLS   90 (278)
T ss_dssp             TTTCEEEEESTTSHHHHHHHHHHHHTTCEEEEEECCSCCTTCSSCCCCHHHHHHHHHHHHHHTCCEEEEECCTTCHHHHH
T ss_pred             CCCCEEEEECCCChHHHHHHHHHHHCCCeEEEEecccccccccccccchHHHHHHHHHHHhcCCeEEEEeCCCCCHHHHH
Confidence            35789999997 999999999999999999999876            34333332   2334332   23555555444


Q ss_pred             Hh-------cCCccEEEEcCCC
Q 018067          243 AA-------MGTMDGIIDTVSA  257 (361)
Q Consensus       243 ~~-------~~g~d~vid~~g~  257 (361)
                      ++       .+++|++|+++|.
T Consensus        91 ~~~~~~~~~~g~id~lv~nAg~  112 (278)
T 3sx2_A           91 AALQAGLDELGRLDIVVANAGI  112 (278)
T ss_dssp             HHHHHHHHHHCCCCEEEECCCC
T ss_pred             HHHHHHHHHcCCCCEEEECCCC
Confidence            33       2489999999985

>3d64_A Adenosylhomocysteinase; structural genomics, ssgcid, S-adenosyl-L-homocysteine hydro NAD, one-carbon metabolism; HET: NAD; 2.30A {Burkholderia pseudomallei} PDB: 3glq_A*

Probab=97.14  E-value=0.0018  Score=61.59  Aligned_cols=91  Identities=18%  Similarity=0.220  Sum_probs=71.1

Q ss_pred             CCCCEEEEEcCChHHHHHHHHHHHcCCeEEEEeCCchhHHHHHHHcCCCEEecCCCHHHHHHhcCCccEEEEcCCCcccH
Q 018067          182 KPGMHVGVVGLGGLGHVAVKFAKAMGVKVTVISTSPSKKSEAIERLGADSFLVSRDQDEMQAAMGTMDGIIDTVSAVHPL  261 (361)
Q Consensus       182 ~~g~~vlV~Gag~vG~~a~~la~~~g~~vi~~~~~~~~~~~~~~~~g~~~vv~~~~~~~~~~~~~g~d~vid~~g~~~~~  261 (361)
                      -.|++|.|+|.|.+|..+++.++.+|++|++++++..+.... ...|... .      .+.++....|+|+.+++....+
T Consensus       275 L~GktVgIIG~G~IG~~vA~~l~~~G~~V~v~d~~~~~~~~a-~~~G~~~-~------~l~ell~~aDiVi~~~~t~~lI  346 (494)
T 3d64_A          275 IAGKIAVVAGYGDVGKGCAQSLRGLGATVWVTEIDPICALQA-AMEGYRV-V------TMEYAADKADIFVTATGNYHVI  346 (494)
T ss_dssp             CTTCEEEEECCSHHHHHHHHHHHTTTCEEEEECSCHHHHHHH-HTTTCEE-C------CHHHHTTTCSEEEECSSSSCSB
T ss_pred             cCCCEEEEEccCHHHHHHHHHHHHCCCEEEEEeCChHhHHHH-HHcCCEe-C------CHHHHHhcCCEEEECCCccccc
Confidence            578999999999999999999999999999999887653233 2445532 1      2445666899999998765544


Q ss_pred             -HHHHhccccCCEEEEecCC
Q 018067          262 -MPLIGLLKSQGKLVLVGAP  280 (361)
Q Consensus       262 -~~~~~~l~~~G~~v~~g~~  280 (361)
                       ...+..++++..++.+|..
T Consensus       347 ~~~~l~~MK~gAilINvgrg  366 (494)
T 3d64_A          347 NHDHMKAMRHNAIVCNIGHF  366 (494)
T ss_dssp             CHHHHHHCCTTEEEEECSSS
T ss_pred             CHHHHhhCCCCcEEEEcCCC
Confidence             4678899999999999864

>3pwz_A Shikimate dehydrogenase 3; alpha-beta, oxidoreductase; 1.71A {Pseudomonas putida}

Probab=97.14  E-value=0.0024  Score=56.21  Aligned_cols=94  Identities=13%  Similarity=0.040  Sum_probs=67.0

Q ss_pred             CCCCEEEEEcCChHHHHHHHHHHHcCC-eEEEEeCCchhHHHHHHHcCC--CEEecCCCHHHHHHhcCCccEEEEcCCCc
Q 018067          182 KPGMHVGVVGLGGLGHVAVKFAKAMGV-KVTVISTSPSKKSEAIERLGA--DSFLVSRDQDEMQAAMGTMDGIIDTVSAV  258 (361)
Q Consensus       182 ~~g~~vlV~Gag~vG~~a~~la~~~g~-~vi~~~~~~~~~~~~~~~~g~--~~vv~~~~~~~~~~~~~g~d~vid~~g~~  258 (361)
                      -.+++++|+|+|++|.+++..+...|+ +|+++.++.++.+.++++++.  ...+...+   +..  ..+|+||++++..
T Consensus       118 l~~k~~lvlGaGg~~~aia~~L~~~G~~~v~i~~R~~~~a~~la~~~~~~~~~~~~~~~---l~~--~~~DivInaTp~g  192 (272)
T 3pwz_A          118 LRNRRVLLLGAGGAVRGALLPFLQAGPSELVIANRDMAKALALRNELDHSRLRISRYEA---LEG--QSFDIVVNATSAS  192 (272)
T ss_dssp             CTTSEEEEECCSHHHHHHHHHHHHTCCSEEEEECSCHHHHHHHHHHHCCTTEEEECSGG---GTT--CCCSEEEECSSGG
T ss_pred             ccCCEEEEECccHHHHHHHHHHHHcCCCEEEEEeCCHHHHHHHHHHhccCCeeEeeHHH---hcc--cCCCEEEECCCCC
Confidence            368899999999999999999999997 999999999988888888764  22222222   111  5799999998753


Q ss_pred             cc---HHHHHhccccCCEEEEecCC
Q 018067          259 HP---LMPLIGLLKSQGKLVLVGAP  280 (361)
Q Consensus       259 ~~---~~~~~~~l~~~G~~v~~g~~  280 (361)
                      ..   .....+.++++..++++...
T Consensus       193 m~~~~~~i~~~~l~~~~~V~DlvY~  217 (272)
T 3pwz_A          193 LTADLPPLPADVLGEAALAYELAYG  217 (272)
T ss_dssp             GGTCCCCCCGGGGTTCSEEEESSCS
T ss_pred             CCCCCCCCCHHHhCcCCEEEEeecC
Confidence            20   00123456777777777553

>3h2s_A Putative NADH-flavin reductase; Q03B84, NESG, LCR19, structural genomics, PSI-2, protein structure initiative; HET: NDP; 1.78A {Lactobacillus casei atcc 334}

Probab=97.13  E-value=0.0015  Score=55.31  Aligned_cols=91  Identities=22%  Similarity=0.308  Sum_probs=62.6

Q ss_pred             EEEEEcC-ChHHHHHHHHHHHcCCeEEEEeCCchhHHHHHHHcCCCEE-ecCCCHHHHHHhcCCccEEEEcCCCc-----
Q 018067          186 HVGVVGL-GGLGHVAVKFAKAMGVKVTVISTSPSKKSEAIERLGADSF-LVSRDQDEMQAAMGTMDGIIDTVSAV-----  258 (361)
Q Consensus       186 ~vlV~Ga-g~vG~~a~~la~~~g~~vi~~~~~~~~~~~~~~~~g~~~v-v~~~~~~~~~~~~~g~d~vid~~g~~-----  258 (361)
                      +|||+|+ |.+|..++..+...|.+|++++++.++...+ ..-+...+ .|..+++.  +...++|+||+++|..     
T Consensus         2 kilVtGatG~iG~~l~~~L~~~g~~V~~~~R~~~~~~~~-~~~~~~~~~~D~~d~~~--~~~~~~d~vi~~ag~~~~~~~   78 (224)
T 3h2s_A            2 KIAVLGATGRAGSAIVAEARRRGHEVLAVVRDPQKAADR-LGATVATLVKEPLVLTE--ADLDSVDAVVDALSVPWGSGR   78 (224)
T ss_dssp             EEEEETTTSHHHHHHHHHHHHTTCEEEEEESCHHHHHHH-TCTTSEEEECCGGGCCH--HHHTTCSEEEECCCCCTTSSC
T ss_pred             EEEEEcCCCHHHHHHHHHHHHCCCEEEEEEecccccccc-cCCCceEEecccccccH--hhcccCCEEEECCccCCCcch
Confidence            5899998 9999999999999999999999988765443 12233322 23333333  4556899999999873     


Q ss_pred             -----ccHHHHHhccc-cCCEEEEecC
Q 018067          259 -----HPLMPLIGLLK-SQGKLVLVGA  279 (361)
Q Consensus       259 -----~~~~~~~~~l~-~~G~~v~~g~  279 (361)
                           ......++.++ .+++++.+++
T Consensus        79 ~~~n~~~~~~l~~a~~~~~~~~v~~SS  105 (224)
T 3h2s_A           79 GYLHLDFATHLVSLLRNSDTLAVFILG  105 (224)
T ss_dssp             THHHHHHHHHHHHTCTTCCCEEEEECC
T ss_pred             hhHHHHHHHHHHHHHHHcCCcEEEEec
Confidence                 11234455553 4578998864

>3tsc_A Putative oxidoreductase; structural genomics, seattle structural genomics center for infectious disease, ssgcid, nucleotide; HET: NAD; 2.05A {Mycobacterium avium subsp} SCOP: c.2.1.0

Probab=97.13  E-value=0.0027  Score=55.90  Aligned_cols=76  Identities=21%  Similarity=0.320  Sum_probs=53.2

Q ss_pred             CCCCEEEEEcC-ChHHHHHHHHHHHcCCeEEEEeC-------------CchhHHHHHH---HcCCCE---EecCCCHHHH
Q 018067          182 KPGMHVGVVGL-GGLGHVAVKFAKAMGVKVTVIST-------------SPSKKSEAIE---RLGADS---FLVSRDQDEM  241 (361)
Q Consensus       182 ~~g~~vlV~Ga-g~vG~~a~~la~~~g~~vi~~~~-------------~~~~~~~~~~---~~g~~~---vv~~~~~~~~  241 (361)
                      -.|+++||.|+ +++|.++++.+...|++|+++++             +.++..+..+   ..+...   ..|..+.+.+
T Consensus         9 l~~k~~lVTGas~GIG~a~a~~la~~G~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~D~~~~~~v   88 (277)
T 3tsc_A            9 LEGRVAFITGAARGQGRAHAVRMAAEGADIIAVDIAGKLPSCVPYDPASPDDLSETVRLVEAANRRIVAAVVDTRDFDRL   88 (277)
T ss_dssp             TTTCEEEEESTTSHHHHHHHHHHHHTTCEEEEEECCSCCCTTCCSCCCCHHHHHHHHHHHHHTTCCEEEEECCTTCHHHH
T ss_pred             cCCCEEEEECCccHHHHHHHHHHHHcCCEEEEEeccccccccccccccCHHHHHHHHHHHHhcCCeEEEEECCCCCHHHH
Confidence            35789999997 99999999999999999999987             3444444333   234332   2355565544


Q ss_pred             HHh-------cCCccEEEEcCCC
Q 018067          242 QAA-------MGTMDGIIDTVSA  257 (361)
Q Consensus       242 ~~~-------~~g~d~vid~~g~  257 (361)
                      .++       .+++|++|+++|.
T Consensus        89 ~~~~~~~~~~~g~id~lvnnAg~  111 (277)
T 3tsc_A           89 RKVVDDGVAALGRLDIIVANAGV  111 (277)
T ss_dssp             HHHHHHHHHHHSCCCEEEECCCC
T ss_pred             HHHHHHHHHHcCCCCEEEECCCC
Confidence            432       2579999999985

>2c2x_A Methylenetetrahydrofolate dehydrogenase- methenyltetrahydrofolate cyclohydrolase; NADP; 2.0A {Mycobacterium tuberculosis} PDB: 2c2y_A

Probab=97.12  E-value=0.0015  Score=57.19  Aligned_cols=97  Identities=24%  Similarity=0.349  Sum_probs=73.7

Q ss_pred             cccchhhhhhhhHhhhcCCCCCCCEEEEEcCC-hHHHHHHHHHHHc--CCeEEEEeCCchhHHHHHHHcCCCEEecCCCH
Q 018067          162 APLLCAGITVYSPLRFYGLDKPGMHVGVVGLG-GLGHVAVKFAKAM--GVKVTVISTSPSKKSEAIERLGADSFLVSRDQ  238 (361)
Q Consensus       162 a~l~~~~~ta~~~l~~~~~~~~g~~vlV~Gag-~vG~~a~~la~~~--g~~vi~~~~~~~~~~~~~~~~g~~~vv~~~~~  238 (361)
                      ..+||+...+...+++...--.|++++|+|.| .+|..+++++...  |++|++..+..+.                   
T Consensus       136 ~~~PcTp~gi~~ll~~~~i~l~gk~vvVvG~s~iVG~p~A~lL~~~g~~atVtv~h~~t~~-------------------  196 (281)
T 2c2x_A          136 APLPCTPRGIVHLLRRYDISIAGAHVVVIGRGVTVGRPLGLLLTRRSENATVTLCHTGTRD-------------------  196 (281)
T ss_dssp             CCCCHHHHHHHHHHHHTTCCCTTCEEEEECCCTTTHHHHHHHHTSTTTCCEEEEECTTCSC-------------------
T ss_pred             CCCCChHHHHHHHHHHcCCCCCCCEEEEECCCcHHHHHHHHHHhcCCCCCEEEEEECchhH-------------------
Confidence            45677777777778777644689999999997 5799999999999  8999987654422                   


Q ss_pred             HHHHHhcCCccEEEEcCCCcccHHHHHhccccCCEEEEecCCC
Q 018067          239 DEMQAAMGTMDGIIDTVSAVHPLMPLIGLLKSQGKLVLVGAPE  281 (361)
Q Consensus       239 ~~~~~~~~g~d~vid~~g~~~~~~~~~~~l~~~G~~v~~g~~~  281 (361)
                        +.+....+|++|.++|.+..  --.+.++++..++++|.+.
T Consensus       197 --L~~~~~~ADIVI~Avg~p~~--I~~~~vk~GavVIDVgi~r  235 (281)
T 2c2x_A          197 --LPALTRQADIVVAAVGVAHL--LTADMVRPGAAVIDVGVSR  235 (281)
T ss_dssp             --HHHHHTTCSEEEECSCCTTC--BCGGGSCTTCEEEECCEEE
T ss_pred             --HHHHHhhCCEEEECCCCCcc--cCHHHcCCCcEEEEccCCC
Confidence              23444568999999999873  3345578999999998753

>3e48_A Putative nucleoside-diphosphate-sugar epimerase; alpha-beta protein., structural genomics, PSI-2, protein STR initiative; 1.60A {Staphylococcus aureus subsp}

Probab=97.12  E-value=0.001  Score=58.87  Aligned_cols=95  Identities=20%  Similarity=0.171  Sum_probs=68.0

Q ss_pred             EEEEEcC-ChHHHHHHHHHHHc-CCeEEEEeCCchhHHHHHHHcCCC-EEecCCCHHHHHHhcCCccEEEEcCCCcc---
Q 018067          186 HVGVVGL-GGLGHVAVKFAKAM-GVKVTVISTSPSKKSEAIERLGAD-SFLVSRDQDEMQAAMGTMDGIIDTVSAVH---  259 (361)
Q Consensus       186 ~vlV~Ga-g~vG~~a~~la~~~-g~~vi~~~~~~~~~~~~~~~~g~~-~vv~~~~~~~~~~~~~g~d~vid~~g~~~---  259 (361)
                      +|||+|+ |.+|..+++.+... |.+|++++++.++...+ ...++. ...|..+++.+.++..++|+||.+++...   
T Consensus         2 ~ilVtGatG~iG~~l~~~L~~~~g~~V~~~~R~~~~~~~~-~~~~v~~~~~D~~d~~~l~~~~~~~d~vi~~a~~~~~~~   80 (289)
T 3e48_A            2 NIMLTGATGHLGTHITNQAIANHIDHFHIGVRNVEKVPDD-WRGKVSVRQLDYFNQESMVEAFKGMDTVVFIPSIIHPSF   80 (289)
T ss_dssp             CEEEETTTSHHHHHHHHHHHHTTCTTEEEEESSGGGSCGG-GBTTBEEEECCTTCHHHHHHHTTTCSEEEECCCCCCSHH
T ss_pred             EEEEEcCCchHHHHHHHHHhhCCCCcEEEEECCHHHHHHh-hhCCCEEEEcCCCCHHHHHHHHhCCCEEEEeCCCCccch
Confidence            5899998 99999999998887 89999999988764333 222433 23466777888888889999999998632   


Q ss_pred             ----cHHHHHhccccC--CEEEEecCCC
Q 018067          260 ----PLMPLIGLLKSQ--GKLVLVGAPE  281 (361)
Q Consensus       260 ----~~~~~~~~l~~~--G~~v~~g~~~  281 (361)
                          .....++.++..  ++++.++...
T Consensus        81 ~~~~~~~~l~~aa~~~gv~~iv~~Ss~~  108 (289)
T 3e48_A           81 KRIPEVENLVYAAKQSGVAHIIFIGYYA  108 (289)
T ss_dssp             HHHHHHHHHHHHHHHTTCCEEEEEEESC
T ss_pred             hhHHHHHHHHHHHHHcCCCEEEEEcccC
Confidence                123445555443  4888887643

>3nyw_A Putative oxidoreductase; fatty acid synthesis,3-oxoacyl-[ACP] reductase, NADP+ bindin rossman fold, PSI-II, nysgxrc; 2.16A {Bacteroides thetaiotaomicron}

Probab=97.12  E-value=0.0031  Score=54.76  Aligned_cols=76  Identities=17%  Similarity=0.215  Sum_probs=55.9

Q ss_pred             CCCCEEEEEcC-ChHHHHHHHHHHHcCCeEEEEeCCchhHHHHHHHc-----C-CC---EEecCCCHHHHHHh-------
Q 018067          182 KPGMHVGVVGL-GGLGHVAVKFAKAMGVKVTVISTSPSKKSEAIERL-----G-AD---SFLVSRDQDEMQAA-------  244 (361)
Q Consensus       182 ~~g~~vlV~Ga-g~vG~~a~~la~~~g~~vi~~~~~~~~~~~~~~~~-----g-~~---~vv~~~~~~~~~~~-------  244 (361)
                      ..++++||.|+ |++|.++++.+...|++|++++++.++...+.+++     + ..   ...|..+.+.+.++       
T Consensus         5 ~~~k~~lVTGas~GIG~aia~~l~~~G~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~~~Dv~~~~~v~~~~~~~~~~   84 (250)
T 3nyw_A            5 KQKGLAIITGASQGIGAVIAAGLATDGYRVVLIARSKQNLEKVHDEIMRSNKHVQEPIVLPLDITDCTKADTEIKDIHQK   84 (250)
T ss_dssp             CCCCEEEEESTTSHHHHHHHHHHHHHTCEEEEEESCHHHHHHHHHHHHHHCTTSCCCEEEECCTTCHHHHHHHHHHHHHH
T ss_pred             CCCCEEEEECCCcHHHHHHHHHHHHCCCEEEEEECCHHHHHHHHHHHHHhccccCcceEEeccCCCHHHHHHHHHHHHHh
Confidence            35788999997 99999999999999999999999988766665543     2 11   12355555443332       


Q ss_pred             cCCccEEEEcCCC
Q 018067          245 MGTMDGIIDTVSA  257 (361)
Q Consensus       245 ~~g~d~vid~~g~  257 (361)
                      .+++|++|+++|.
T Consensus        85 ~g~iD~lvnnAg~   97 (250)
T 3nyw_A           85 YGAVDILVNAAAM   97 (250)
T ss_dssp             HCCEEEEEECCCC
T ss_pred             cCCCCEEEECCCc
Confidence            2579999999985

>1leh_A Leucine dehydrogenase; oxidoreductase; 2.20A {Lysinibacillus sphaericus} SCOP: c.2.1.7 c.58.1.1

Probab=97.11  E-value=0.0017  Score=59.61  Aligned_cols=49  Identities=31%  Similarity=0.426  Sum_probs=43.5

Q ss_pred             CCCCEEEEEcCChHHHHHHHHHHHcCCeEEEEeCCchhHHHHHHHcCCC
Q 018067          182 KPGMHVGVVGLGGLGHVAVKFAKAMGVKVTVISTSPSKKSEAIERLGAD  230 (361)
Q Consensus       182 ~~g~~vlV~Gag~vG~~a~~la~~~g~~vi~~~~~~~~~~~~~~~~g~~  230 (361)
                      -.|++|+|.|.|.+|..+++.+...|++|++.+++.++..++++++|++
T Consensus       171 L~GktV~V~G~G~VG~~~A~~L~~~GakVvv~D~~~~~l~~~a~~~ga~  219 (364)
T 1leh_A          171 LEGLAVSVQGLGNVAKALCKKLNTEGAKLVVTDVNKAAVSAAVAEEGAD  219 (364)
T ss_dssp             CTTCEEEEECCSHHHHHHHHHHHHTTCEEEEECSCHHHHHHHHHHHCCE
T ss_pred             CCcCEEEEECchHHHHHHHHHHHHCCCEEEEEcCCHHHHHHHHHHcCCE
Confidence            5789999999999999999999999999998888888777777777764

>1v8b_A Adenosylhomocysteinase; hydrolase; HET: NAD ADN; 2.40A {Plasmodium falciparum} SCOP: c.2.1.4 c.23.12.3

Probab=97.11  E-value=0.0026  Score=60.33  Aligned_cols=91  Identities=18%  Similarity=0.226  Sum_probs=71.3

Q ss_pred             CCCCEEEEEcCChHHHHHHHHHHHcCCeEEEEeCCchhHHHHHHHcCCCEEecCCCHHHHHHhcCCccEEEEcCCCcccH
Q 018067          182 KPGMHVGVVGLGGLGHVAVKFAKAMGVKVTVISTSPSKKSEAIERLGADSFLVSRDQDEMQAAMGTMDGIIDTVSAVHPL  261 (361)
Q Consensus       182 ~~g~~vlV~Gag~vG~~a~~la~~~g~~vi~~~~~~~~~~~~~~~~g~~~vv~~~~~~~~~~~~~g~d~vid~~g~~~~~  261 (361)
                      -.|++|.|+|.|.+|..+++.++.+|++|++++++..+.... ...|+. +.      .+.++....|+|+-+.+....+
T Consensus       255 l~GktVgIIG~G~IG~~vA~~l~~~G~~Viv~d~~~~~~~~a-~~~g~~-~~------~l~ell~~aDiVi~~~~t~~lI  326 (479)
T 1v8b_A          255 ISGKIVVICGYGDVGKGCASSMKGLGARVYITEIDPICAIQA-VMEGFN-VV------TLDEIVDKGDFFITCTGNVDVI  326 (479)
T ss_dssp             CTTSEEEEECCSHHHHHHHHHHHHHTCEEEEECSCHHHHHHH-HTTTCE-EC------CHHHHTTTCSEEEECCSSSSSB
T ss_pred             cCCCEEEEEeeCHHHHHHHHHHHhCcCEEEEEeCChhhHHHH-HHcCCE-ec------CHHHHHhcCCEEEECCChhhhc
Confidence            579999999999999999999999999999999887654333 345553 11      2445566899999998766544


Q ss_pred             -HHHHhccccCCEEEEecCC
Q 018067          262 -MPLIGLLKSQGKLVLVGAP  280 (361)
Q Consensus       262 -~~~~~~l~~~G~~v~~g~~  280 (361)
                       ...+..++++..++.+|..
T Consensus       327 ~~~~l~~MK~gailiNvgrg  346 (479)
T 1v8b_A          327 KLEHLLKMKNNAVVGNIGHF  346 (479)
T ss_dssp             CHHHHTTCCTTCEEEECSST
T ss_pred             CHHHHhhcCCCcEEEEeCCC
Confidence             3677889999999999864

>4fc7_A Peroxisomal 2,4-dienoyl-COA reductase; SDR/rossmann fold, peroxisomal beta-oxidation, oxidoreductas; HET: NAP COA; 1.84A {Homo sapiens} PDB: 4fc6_A*

Probab=97.11  E-value=0.0024  Score=56.36  Aligned_cols=76  Identities=20%  Similarity=0.243  Sum_probs=56.1

Q ss_pred             CCCCEEEEEcC-ChHHHHHHHHHHHcCCeEEEEeCCchhHHHHHHHc----CCCE---EecCCCHHHHHHh-------cC
Q 018067          182 KPGMHVGVVGL-GGLGHVAVKFAKAMGVKVTVISTSPSKKSEAIERL----GADS---FLVSRDQDEMQAA-------MG  246 (361)
Q Consensus       182 ~~g~~vlV~Ga-g~vG~~a~~la~~~g~~vi~~~~~~~~~~~~~~~~----g~~~---vv~~~~~~~~~~~-------~~  246 (361)
                      -.|+++||.|+ |++|.++++.+...|++|++++++.++.....+++    +...   ..|-.+++.+.++       .+
T Consensus        25 l~~k~~lVTGas~GIG~aia~~l~~~G~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~Dv~~~~~v~~~~~~~~~~~g  104 (277)
T 4fc7_A           25 LRDKVAFITGGGSGIGFRIAEIFMRHGCHTVIASRSLPRVLTAARKLAGATGRRCLPLSMDVRAPPAVMAAVDQALKEFG  104 (277)
T ss_dssp             TTTCEEEEETTTSHHHHHHHHHHHTTTCEEEEEESCHHHHHHHHHHHHHHHSSCEEEEECCTTCHHHHHHHHHHHHHHHS
T ss_pred             cCCCEEEEeCCCchHHHHHHHHHHHCCCEEEEEeCCHHHHHHHHHHHHHhcCCcEEEEEcCCCCHHHHHHHHHHHHHHcC
Confidence            36789999997 99999999999999999999999987765554443    4332   2355565443332       24


Q ss_pred             CccEEEEcCCC
Q 018067          247 TMDGIIDTVSA  257 (361)
Q Consensus       247 g~d~vid~~g~  257 (361)
                      ++|++|+++|.
T Consensus       105 ~id~lv~nAg~  115 (277)
T 4fc7_A          105 RIDILINCAAG  115 (277)
T ss_dssp             CCCEEEECCCC
T ss_pred             CCCEEEECCcC
Confidence            79999999983

>3uce_A Dehydrogenase; rossmann fold, oxidoreductase; HET: NDP; 1.80A {Vibrio vulnificus}

Probab=97.10  E-value=0.00087  Score=57.09  Aligned_cols=84  Identities=21%  Similarity=0.190  Sum_probs=61.5

Q ss_pred             CCCEEEEEcC-ChHHHHHHHHHHHcCCeEEEEeCCchhHHHHHHHcCCCEEecCCCHHHHHHhc---CCccEEEEcCCCc
Q 018067          183 PGMHVGVVGL-GGLGHVAVKFAKAMGVKVTVISTSPSKKSEAIERLGADSFLVSRDQDEMQAAM---GTMDGIIDTVSAV  258 (361)
Q Consensus       183 ~g~~vlV~Ga-g~vG~~a~~la~~~g~~vi~~~~~~~~~~~~~~~~g~~~vv~~~~~~~~~~~~---~g~d~vid~~g~~  258 (361)
                      .++++||.|+ |++|.+.++.+...|++|++++++.+              .|-.+++.++++.   +++|++|+++|..
T Consensus         5 ~~k~vlVTGas~gIG~~~a~~l~~~G~~V~~~~r~~~--------------~D~~~~~~v~~~~~~~g~id~lv~nAg~~   70 (223)
T 3uce_A            5 DKTVYVVLGGTSGIGAELAKQLESEHTIVHVASRQTG--------------LDISDEKSVYHYFETIGAFDHLIVTAGSY   70 (223)
T ss_dssp             CCEEEEEETTTSHHHHHHHHHHCSTTEEEEEESGGGT--------------CCTTCHHHHHHHHHHHCSEEEEEECCCCC
T ss_pred             CCCEEEEECCCCHHHHHHHHHHHHCCCEEEEecCCcc--------------cCCCCHHHHHHHHHHhCCCCEEEECCCCC
Confidence            4678999997 99999999999889999999887653              3445554444332   5799999999843


Q ss_pred             c--------------------------cHHHHHhccccCCEEEEecCC
Q 018067          259 H--------------------------PLMPLIGLLKSQGKLVLVGAP  280 (361)
Q Consensus       259 ~--------------------------~~~~~~~~l~~~G~~v~~g~~  280 (361)
                      .                          ..+.++..++++|+++.+++.
T Consensus        71 ~~~~~~~~~~~~~~~~~~~~N~~g~~~~~~~~~~~~~~~g~iv~~sS~  118 (223)
T 3uce_A           71 APAGKVVDVEVTQAKYAFDTKFWGAVLAAKHGARYLKQGGSITLTSGM  118 (223)
T ss_dssp             CCCSCTTTSCHHHHHHHHHHHHHHHHHHHHHHGGGEEEEEEEEEECCG
T ss_pred             CCCCCcccCCHHHHHhhheeeeeeHHHHHHHHHhhccCCeEEEEecch
Confidence            0                          223345566778999999864

>2pnf_A 3-oxoacyl-[acyl-carrier-protein] reductase; short chain oxidoreductase, rossmann fold, oxidoreductase; HET: 1PE MES; 1.80A {Aquifex aeolicus} PDB: 2p68_A*

Probab=97.10  E-value=0.0021  Score=55.41  Aligned_cols=75  Identities=17%  Similarity=0.269  Sum_probs=54.7

Q ss_pred             CCCEEEEEcC-ChHHHHHHHHHHHcCCeEEEEeCCchhHHHHHHH----cCCCE---EecCCCHHHHHHhc-------CC
Q 018067          183 PGMHVGVVGL-GGLGHVAVKFAKAMGVKVTVISTSPSKKSEAIER----LGADS---FLVSRDQDEMQAAM-------GT  247 (361)
Q Consensus       183 ~g~~vlV~Ga-g~vG~~a~~la~~~g~~vi~~~~~~~~~~~~~~~----~g~~~---vv~~~~~~~~~~~~-------~g  247 (361)
                      .++++||.|+ |.+|..+++.+...|++|++++++.++...+.++    .+...   ..|..+++.+.++.       ++
T Consensus         6 ~~~~vlVtGasggiG~~la~~l~~~G~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~D~~~~~~~~~~~~~~~~~~~~   85 (248)
T 2pnf_A            6 QGKVSLVTGSTRGIGRAIAEKLASAGSTVIITGTSGERAKAVAEEIANKYGVKAHGVEMNLLSEESINKAFEEIYNLVDG   85 (248)
T ss_dssp             TTCEEEETTCSSHHHHHHHHHHHHTTCEEEEEESSHHHHHHHHHHHHHHHCCCEEEEECCTTCHHHHHHHHHHHHHHSSC
T ss_pred             CCCEEEEECCCchHHHHHHHHHHHCCCEEEEEeCChHHHHHHHHHHHhhcCCceEEEEccCCCHHHHHHHHHHHHHhcCC
Confidence            4678999997 9999999999999999999999987766554333    34332   22555555444332       48


Q ss_pred             ccEEEEcCCC
Q 018067          248 MDGIIDTVSA  257 (361)
Q Consensus       248 ~d~vid~~g~  257 (361)
                      +|++|+++|.
T Consensus        86 ~d~vi~~Ag~   95 (248)
T 2pnf_A           86 IDILVNNAGI   95 (248)
T ss_dssp             CSEEEECCCC
T ss_pred             CCEEEECCCC
Confidence            9999999984

>4df3_A Fibrillarin-like rRNA/TRNA 2'-O-methyltransferase; NADP rossmann superfamily, S-adenosyl-L-M (SAM) binding, nucleolus; HET: SAM; 1.73A {Aeropyrum pernix}

Probab=97.10  E-value=0.002  Score=55.20  Aligned_cols=101  Identities=15%  Similarity=0.219  Sum_probs=70.3

Q ss_pred             hhhcCCCCCCCEEEEEcCChHHHHHHHHHHHcCC--eEEEEeCCchhHHHHHHHcCC----CEEe-cCCCHHHHHHhcCC
Q 018067          175 LRFYGLDKPGMHVGVVGLGGLGHVAVKFAKAMGV--KVTVISTSPSKKSEAIERLGA----DSFL-VSRDQDEMQAAMGT  247 (361)
Q Consensus       175 l~~~~~~~~g~~vlV~Gag~vG~~a~~la~~~g~--~vi~~~~~~~~~~~~~~~~g~----~~vv-~~~~~~~~~~~~~g  247 (361)
                      +.... ++||++||=+|+|. |..+..+|+..|-  +|+.++.+++..+.+.+....    ..+. +..+++......+.
T Consensus        70 l~~l~-ikpG~~VldlG~G~-G~~~~~la~~VG~~G~V~avD~s~~~~~~l~~~a~~~~ni~~V~~d~~~p~~~~~~~~~  147 (233)
T 4df3_A           70 LIELP-VKEGDRILYLGIAS-GTTASHMSDIIGPRGRIYGVEFAPRVMRDLLTVVRDRRNIFPILGDARFPEKYRHLVEG  147 (233)
T ss_dssp             CSCCC-CCTTCEEEEETCTT-SHHHHHHHHHHCTTCEEEEEECCHHHHHHHHHHSTTCTTEEEEESCTTCGGGGTTTCCC
T ss_pred             hhhcC-CCCCCEEEEecCcC-CHHHHHHHHHhCCCceEEEEeCCHHHHHHHHHhhHhhcCeeEEEEeccCccccccccce
Confidence            44443 79999999999975 8889999998875  899999998877666544321    2222 23334433334457


Q ss_pred             ccEEEEcCCCcc----cHHHHHhccccCCEEEEe
Q 018067          248 MDGIIDTVSAVH----PLMPLIGLLKSQGKLVLV  277 (361)
Q Consensus       248 ~d~vid~~g~~~----~~~~~~~~l~~~G~~v~~  277 (361)
                      +|+||.....+.    .+..+.+.|+++|+++..
T Consensus       148 vDvVf~d~~~~~~~~~~l~~~~r~LKpGG~lvI~  181 (233)
T 4df3_A          148 VDGLYADVAQPEQAAIVVRNARFFLRDGGYMLMA  181 (233)
T ss_dssp             EEEEEECCCCTTHHHHHHHHHHHHEEEEEEEEEE
T ss_pred             EEEEEEeccCChhHHHHHHHHHHhccCCCEEEEE
Confidence            999887655432    356678899999998875

>3e03_A Short chain dehydrogenase; structural genomics, PSI-2, protein structure initiative, NEW YORK structural genomix research consortium; 1.69A {Xanthomonas campestris PV}

Probab=97.10  E-value=0.0031  Score=55.49  Aligned_cols=75  Identities=24%  Similarity=0.329  Sum_probs=53.0

Q ss_pred             CCCEEEEEcC-ChHHHHHHHHHHHcCCeEEEEeCCchh-------HHHHH---HHcCCC---EEecCCCHHHHHHh----
Q 018067          183 PGMHVGVVGL-GGLGHVAVKFAKAMGVKVTVISTSPSK-------KSEAI---ERLGAD---SFLVSRDQDEMQAA----  244 (361)
Q Consensus       183 ~g~~vlV~Ga-g~vG~~a~~la~~~g~~vi~~~~~~~~-------~~~~~---~~~g~~---~vv~~~~~~~~~~~----  244 (361)
                      .|+++||.|+ +++|.++++.+...|++|++++++.++       .....   +..+..   ...|-.+++.+.++    
T Consensus         5 ~~k~~lVTGas~GIG~aia~~la~~G~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~Dv~~~~~v~~~~~~~   84 (274)
T 3e03_A            5 SGKTLFITGASRGIGLAIALRAARDGANVAIAAKSAVANPKLPGTIHSAAAAVNAAGGQGLALKCDIREEDQVRAAVAAT   84 (274)
T ss_dssp             TTCEEEEETTTSHHHHHHHHHHHHTTCEEEEEESCCSCCTTSCCCHHHHHHHHHHHTSEEEEEECCTTCHHHHHHHHHHH
T ss_pred             CCcEEEEECCCChHHHHHHHHHHHCCCEEEEEeccchhhhhhHHHHHHHHHHHHhcCCeEEEEeCCCCCHHHHHHHHHHH
Confidence            5789999997 999999999999999999999988643       22222   233432   22355555444332    


Q ss_pred             ---cCCccEEEEcCCC
Q 018067          245 ---MGTMDGIIDTVSA  257 (361)
Q Consensus       245 ---~~g~d~vid~~g~  257 (361)
                         .+++|++|+++|.
T Consensus        85 ~~~~g~iD~lvnnAG~  100 (274)
T 3e03_A           85 VDTFGGIDILVNNASA  100 (274)
T ss_dssp             HHHHSCCCEEEECCCC
T ss_pred             HHHcCCCCEEEECCCc
Confidence               2479999999985

>3phh_A Shikimate dehydrogenase; shikimate pathway, helicobacter PYL oxidoreductase, alpha/beta domain, rossmann fold; HET: SKM; 1.42A {Helicobacter pylori} PDB: 3phg_A* 3phi_A* 3phj_A* 4foo_A 4fpx_A 4fos_A* 4fr5_A* 4fq8_A*

Probab=97.10  E-value=0.0039  Score=54.62  Aligned_cols=88  Identities=25%  Similarity=0.253  Sum_probs=65.9

Q ss_pred             CCEEEEEcCChHHHHHHHHHHHcCCeEEEEeCCchhHHHHHHHcCCCEEecCCCHHHHHHhcCCccEEEEcCCCcc----
Q 018067          184 GMHVGVVGLGGLGHVAVKFAKAMGVKVTVISTSPSKKSEAIERLGADSFLVSRDQDEMQAAMGTMDGIIDTVSAVH----  259 (361)
Q Consensus       184 g~~vlV~Gag~vG~~a~~la~~~g~~vi~~~~~~~~~~~~~~~~g~~~vv~~~~~~~~~~~~~g~d~vid~~g~~~----  259 (361)
                      +++++|+|+|++|.+++..+...|.+|+++.|+.++.+.++ ++++.. +...+      +. .+|+||++++...    
T Consensus       118 ~k~vlvlGaGGaaraia~~L~~~G~~v~V~nRt~~ka~~la-~~~~~~-~~~~~------l~-~~DiVInaTp~Gm~~~~  188 (269)
T 3phh_A          118 YQNALILGAGGSAKALACELKKQGLQVSVLNRSSRGLDFFQ-RLGCDC-FMEPP------KS-AFDLIINATSASLHNEL  188 (269)
T ss_dssp             CCEEEEECCSHHHHHHHHHHHHTTCEEEEECSSCTTHHHHH-HHTCEE-ESSCC------SS-CCSEEEECCTTCCCCSC
T ss_pred             CCEEEEECCCHHHHHHHHHHHHCCCEEEEEeCCHHHHHHHH-HCCCeE-ecHHH------hc-cCCEEEEcccCCCCCCC
Confidence            89999999999999999999999999999999999888887 788543 23322      11 7999999986531    


Q ss_pred             cH--HHHHhccccCCEEEEecCC
Q 018067          260 PL--MPLIGLLKSQGKLVLVGAP  280 (361)
Q Consensus       260 ~~--~~~~~~l~~~G~~v~~g~~  280 (361)
                      .+  ......++++..++++...
T Consensus       189 ~l~~~~l~~~l~~~~~v~D~vY~  211 (269)
T 3phh_A          189 PLNKEVLKGYFKEGKLAYDLAYG  211 (269)
T ss_dssp             SSCHHHHHHHHHHCSEEEESCCS
T ss_pred             CCChHHHHhhCCCCCEEEEeCCC
Confidence            11  1122256788888888654

>3orf_A Dihydropteridine reductase; alpha-beta-alpha sandwich, rossmann fold, oxidoreductase (AC NADH), NADH binding, oxidoreductase; HET: NAD; 2.16A {Dictyostelium discoideum}

Probab=97.10  E-value=0.0016  Score=56.50  Aligned_cols=93  Identities=20%  Similarity=0.241  Sum_probs=63.8

Q ss_pred             CCCCEEEEEcC-ChHHHHHHHHHHHcCCeEEEEeCCchhHHHHHHHcCCCEEecCCCHHHHHHh-------cCCccEEEE
Q 018067          182 KPGMHVGVVGL-GGLGHVAVKFAKAMGVKVTVISTSPSKKSEAIERLGADSFLVSRDQDEMQAA-------MGTMDGIID  253 (361)
Q Consensus       182 ~~g~~vlV~Ga-g~vG~~a~~la~~~g~~vi~~~~~~~~~~~~~~~~g~~~vv~~~~~~~~~~~-------~~g~d~vid  253 (361)
                      +-++++||.|+ |++|..+++.+...|++|++++++.++...      ....++..+.+.+..+       .+++|++|+
T Consensus        20 ~m~k~vlITGas~gIG~~la~~l~~~G~~V~~~~r~~~~~~~------~~~~~d~~d~~~v~~~~~~~~~~~g~iD~li~   93 (251)
T 3orf_A           20 HMSKNILVLGGSGALGAEVVKFFKSKSWNTISIDFRENPNAD------HSFTIKDSGEEEIKSVIEKINSKSIKVDTFVC   93 (251)
T ss_dssp             --CCEEEEETTTSHHHHHHHHHHHHTTCEEEEEESSCCTTSS------EEEECSCSSHHHHHHHHHHHHTTTCCEEEEEE
T ss_pred             ccCCEEEEECCCCHHHHHHHHHHHHCCCEEEEEeCCcccccc------cceEEEeCCHHHHHHHHHHHHHHcCCCCEEEE
Confidence            45789999997 999999999999999999999998764321      1122344554433322       247999999


Q ss_pred             cCCCc-------c-------------------cHHHHHhccccCCEEEEecCC
Q 018067          254 TVSAV-------H-------------------PLMPLIGLLKSQGKLVLVGAP  280 (361)
Q Consensus       254 ~~g~~-------~-------------------~~~~~~~~l~~~G~~v~~g~~  280 (361)
                      ++|..       .                   ..+.+...++++|+++.+++.
T Consensus        94 ~Ag~~~~~~~~~~~~~~~~~~~~~~N~~g~~~l~~~~~~~~~~~g~iv~isS~  146 (251)
T 3orf_A           94 AAGGWSGGNASSDEFLKSVKGMIDMNLYSAFASAHIGAKLLNQGGLFVLTGAS  146 (251)
T ss_dssp             CCCCCCCBCTTSTTHHHHHHHHHHHHHHHHHHHHHHHHHHEEEEEEEEEECCG
T ss_pred             CCccCCCCCcccccCHHHHHHHHHHHhHHHHHHHHHHHHhhccCCEEEEEech
Confidence            99841       0                   123345566678999999864

>3dfz_A SIRC, precorrin-2 dehydrogenase; NAD dehydrogenase, cobalamin biosynthesis, NAD, oxidoreducta porphyrin biosynthesis; 2.30A {Bacillus megaterium}

Probab=97.09  E-value=0.0064  Score=51.64  Aligned_cols=116  Identities=16%  Similarity=0.066  Sum_probs=70.9

Q ss_pred             CCCCEEEEEcCChHHHHHHHHHHHcCCeEEEEeCCch-hHHHHHHHcCCCEEecCCCHHHHHHhcCCccEEEEcCCCccc
Q 018067          182 KPGMHVGVVGLGGLGHVAVKFAKAMGVKVTVISTSPS-KKSEAIERLGADSFLVSRDQDEMQAAMGTMDGIIDTVSAVHP  260 (361)
Q Consensus       182 ~~g~~vlV~Gag~vG~~a~~la~~~g~~vi~~~~~~~-~~~~~~~~~g~~~vv~~~~~~~~~~~~~g~d~vid~~g~~~~  260 (361)
                      -.|.+|||+|+|.+|...+..+...|++|++++.... ....+.+..+.. .+. ...+  .....++|+||-+++.+. 
T Consensus        29 L~gk~VLVVGgG~va~~ka~~Ll~~GA~VtVvap~~~~~l~~l~~~~~i~-~i~-~~~~--~~dL~~adLVIaAT~d~~-  103 (223)
T 3dfz_A           29 LKGRSVLVVGGGTIATRRIKGFLQEGAAITVVAPTVSAEINEWEAKGQLR-VKR-KKVG--EEDLLNVFFIVVATNDQA-  103 (223)
T ss_dssp             CTTCCEEEECCSHHHHHHHHHHGGGCCCEEEECSSCCHHHHHHHHTTSCE-EEC-SCCC--GGGSSSCSEEEECCCCTH-
T ss_pred             cCCCEEEEECCCHHHHHHHHHHHHCCCEEEEECCCCCHHHHHHHHcCCcE-EEE-CCCC--HhHhCCCCEEEECCCCHH-
Confidence            3578899999999999999999999999999886543 344444333333 222 1111  122357999999999987 


Q ss_pred             HHHHHhccccCCEEEEecCCCCCcccChHH-HHhCCcEEEecc
Q 018067          261 LMPLIGLLKSQGKLVLVGAPEKPLELPAFS-LLMGRKIVGGSM  302 (361)
Q Consensus       261 ~~~~~~~l~~~G~~v~~g~~~~~~~~~~~~-~~~~~~~i~g~~  302 (361)
                      ++..+...++.|..|.+...+....|.... +-...++|.=+.
T Consensus       104 ~N~~I~~~ak~gi~VNvvD~p~~~~f~~Paiv~rg~l~iaIST  146 (223)
T 3dfz_A          104 VNKFVKQHIKNDQLVNMASSFSDGNIQIPAQFSRGRLSLAIST  146 (223)
T ss_dssp             HHHHHHHHSCTTCEEEC-----CCSEECCEEEEETTEEEEEEC
T ss_pred             HHHHHHHHHhCCCEEEEeCCcccCeEEEeeEEEeCCEEEEEEC
Confidence            555555444588888887654433333222 223456654444

>1sby_A Alcohol dehydrogenase; ternary complex, NAD, trifluoroethanol, oxidoreductase; HET: NAD; 1.10A {Scaptodrosophila lebanonensis} SCOP: c.2.1.2 PDB: 1b14_A* 1b15_A* 1a4u_A* 1b2l_A* 1b16_A* 3rj5_A* 3rj9_A* 1mg5_A*

Probab=97.09  E-value=0.0051  Score=53.29  Aligned_cols=75  Identities=15%  Similarity=0.115  Sum_probs=50.9

Q ss_pred             CCCEEEEEcC-ChHHHHHHHHHHHcCCe-EEEEeCCc--hhHHHHHHHc-CCC---EEecCCCH-HHHHHh-------cC
Q 018067          183 PGMHVGVVGL-GGLGHVAVKFAKAMGVK-VTVISTSP--SKKSEAIERL-GAD---SFLVSRDQ-DEMQAA-------MG  246 (361)
Q Consensus       183 ~g~~vlV~Ga-g~vG~~a~~la~~~g~~-vi~~~~~~--~~~~~~~~~~-g~~---~vv~~~~~-~~~~~~-------~~  246 (361)
                      .++++||.|+ |++|..+++.+...|++ |++++++.  +...++.+.. +..   ...|..++ +.+.++       .+
T Consensus         4 ~~k~vlVtGas~gIG~~~a~~l~~~G~~~v~~~~r~~~~~~~~~l~~~~~~~~~~~~~~D~~~~~~~~~~~~~~~~~~~g   83 (254)
T 1sby_A            4 TNKNVIFVAALGGIGLDTSRELVKRNLKNFVILDRVENPTALAELKAINPKVNITFHTYDVTVPVAESKKLLKKIFDQLK   83 (254)
T ss_dssp             TTCEEEEETTTSHHHHHHHHHHHHTCCSEEEEEESSCCHHHHHHHHHHCTTSEEEEEECCTTSCHHHHHHHHHHHHHHHS
T ss_pred             CCcEEEEECCCChHHHHHHHHHHHCCCcEEEEEecCchHHHHHHHHHhCCCceEEEEEEecCCChHHHHHHHHHHHHhcC
Confidence            4678999997 99999999999999996 88888876  3344443333 222   12344444 333322       24


Q ss_pred             CccEEEEcCCC
Q 018067          247 TMDGIIDTVSA  257 (361)
Q Consensus       247 g~d~vid~~g~  257 (361)
                      ++|++|+++|.
T Consensus        84 ~id~lv~~Ag~   94 (254)
T 1sby_A           84 TVDILINGAGI   94 (254)
T ss_dssp             CCCEEEECCCC
T ss_pred             CCCEEEECCcc
Confidence            79999999984

>1ff9_A Saccharopine reductase; lysine biosynthesis, alpha-aminoadipate pathway, dehydrogenase, oxidoreductase; 2.00A {Magnaporthe grisea} SCOP: c.2.1.3 d.81.1.2 PDB: 1e5l_A* 1e5q_A

Probab=97.09  E-value=0.0026  Score=60.29  Aligned_cols=95  Identities=15%  Similarity=0.174  Sum_probs=66.1

Q ss_pred             CCEEEEEcCChHHHHHHHHHHHcCCeEEEEeCCchhHHHHHHHcCCCE--EecCCCHHHHHHhcCCccEEEEcCCCcccH
Q 018067          184 GMHVGVVGLGGLGHVAVKFAKAMGVKVTVISTSPSKKSEAIERLGADS--FLVSRDQDEMQAAMGTMDGIIDTVSAVHPL  261 (361)
Q Consensus       184 g~~vlV~Gag~vG~~a~~la~~~g~~vi~~~~~~~~~~~~~~~~g~~~--vv~~~~~~~~~~~~~g~d~vid~~g~~~~~  261 (361)
                      +.+|+|+|+|.+|..+++.+...|.+|++++++.++...+++.++...  .++..+.+.+.++..++|+|+++++.....
T Consensus         3 ~k~VlViGaG~iG~~ia~~L~~~G~~V~v~~R~~~~a~~la~~~~~~~~~~~Dv~d~~~l~~~l~~~DvVIn~a~~~~~~   82 (450)
T 1ff9_A            3 TKSVLMLGSGFVTRPTLDVLTDSGIKVTVACRTLESAKKLSAGVQHSTPISLDVNDDAALDAEVAKHDLVISLIPYTFHA   82 (450)
T ss_dssp             CCEEEEECCSTTHHHHHHHHHTTTCEEEEEESSHHHHHHTTTTCTTEEEEECCTTCHHHHHHHHTTSSEEEECCC--CHH
T ss_pred             CCEEEEECCCHHHHHHHHHHHhCcCEEEEEECCHHHHHHHHHhcCCceEEEeecCCHHHHHHHHcCCcEEEECCccccch
Confidence            568999999999999999998889999999998777665544444211  235555555656666899999999864323


Q ss_pred             HHHHhccccCCEEEEec
Q 018067          262 MPLIGLLKSQGKLVLVG  278 (361)
Q Consensus       262 ~~~~~~l~~~G~~v~~g  278 (361)
                      .....+++.+-.++...
T Consensus        83 ~i~~a~l~~g~~vvd~~   99 (450)
T 1ff9_A           83 TVIKSAIRQKKHVVTTS   99 (450)
T ss_dssp             HHHHHHHHHTCEEEESS
T ss_pred             HHHHHHHhCCCeEEEee
Confidence            33445566666666653

>2b4q_A Rhamnolipids biosynthesis 3-oxoacyl-[acyl- carrier-protein] reductase; RHLG-NADP complex, oxidoreductase; HET: NAP; 2.30A {Pseudomonas aeruginosa}

Probab=97.09  E-value=0.0018  Score=57.08  Aligned_cols=75  Identities=16%  Similarity=0.208  Sum_probs=54.9

Q ss_pred             CCCEEEEEcC-ChHHHHHHHHHHHcCCeEEEEeCCchhHHHHHHHcCC--CE---EecCCCHHHHHHh-------cCCcc
Q 018067          183 PGMHVGVVGL-GGLGHVAVKFAKAMGVKVTVISTSPSKKSEAIERLGA--DS---FLVSRDQDEMQAA-------MGTMD  249 (361)
Q Consensus       183 ~g~~vlV~Ga-g~vG~~a~~la~~~g~~vi~~~~~~~~~~~~~~~~g~--~~---vv~~~~~~~~~~~-------~~g~d  249 (361)
                      .++++||.|+ |++|.++++.+...|++|++++++.++..++.+++..  ..   ..|..+++.+.++       .+++|
T Consensus        28 ~~k~vlVTGas~gIG~aia~~L~~~G~~V~~~~r~~~~~~~~~~~l~~~~~~~~~~~Dv~d~~~v~~~~~~~~~~~g~iD  107 (276)
T 2b4q_A           28 AGRIALVTGGSRGIGQMIAQGLLEAGARVFICARDAEACADTATRLSAYGDCQAIPADLSSEAGARRLAQALGELSARLD  107 (276)
T ss_dssp             TTCEEEEETTTSHHHHHHHHHHHHTTCEEEEECSCHHHHHHHHHHHTTSSCEEECCCCTTSHHHHHHHHHHHHHHCSCCS
T ss_pred             CCCEEEEeCCCChHHHHHHHHHHHCCCEEEEEeCCHHHHHHHHHHHHhcCceEEEEeeCCCHHHHHHHHHHHHHhcCCCC
Confidence            4688999997 9999999999999999999999988776666555431  21   1244554433332       24799


Q ss_pred             EEEEcCCC
Q 018067          250 GIIDTVSA  257 (361)
Q Consensus       250 ~vid~~g~  257 (361)
                      ++|+++|.
T Consensus       108 ~lvnnAg~  115 (276)
T 2b4q_A          108 ILVNNAGT  115 (276)
T ss_dssp             EEEECCCC
T ss_pred             EEEECCCC
Confidence            99999984

>2p91_A Enoyl-[acyl-carrier-protein] reductase [NADH]; NADH-dependent enoyl-ACP reductase, FABI, aquifex A VF5, structural genomics, PSI; 2.00A {Aquifex aeolicus}

Probab=97.09  E-value=0.0053  Score=54.29  Aligned_cols=75  Identities=13%  Similarity=0.214  Sum_probs=52.4

Q ss_pred             CCCEEEEEcC---ChHHHHHHHHHHHcCCeEEEEeCCch---hHHHHHHHcCC-C-EEecCCCHHHHHHh-------cCC
Q 018067          183 PGMHVGVVGL---GGLGHVAVKFAKAMGVKVTVISTSPS---KKSEAIERLGA-D-SFLVSRDQDEMQAA-------MGT  247 (361)
Q Consensus       183 ~g~~vlV~Ga---g~vG~~a~~la~~~g~~vi~~~~~~~---~~~~~~~~~g~-~-~vv~~~~~~~~~~~-------~~g  247 (361)
                      .|+++||.|+   |++|.++++.+...|++|++++++.+   ...++.+..+. . ...|..+++.+..+       .++
T Consensus        20 ~~k~vlVTGas~~~gIG~~ia~~l~~~G~~V~~~~r~~~~~~~~~~l~~~~~~~~~~~~Dl~~~~~v~~~~~~~~~~~g~   99 (285)
T 2p91_A           20 EGKRALITGVANERSIAYGIAKSFHREGAQLAFTYATPKLEKRVREIAKGFGSDLVVKCDVSLDEDIKNLKKFLEENWGS   99 (285)
T ss_dssp             TTCEEEECCCSSTTSHHHHHHHHHHHTTCEEEEEESSGGGHHHHHHHHHHTTCCCEEECCTTCHHHHHHHHHHHHHHTSC
T ss_pred             CCCEEEEECCCCCCcHHHHHHHHHHHcCCEEEEEeCCHHHHHHHHHHHHhcCCeEEEEcCCCCHHHHHHHHHHHHHHcCC
Confidence            5688999986   59999999999999999999998874   33333333342 2 12355565444332       247


Q ss_pred             ccEEEEcCCC
Q 018067          248 MDGIIDTVSA  257 (361)
Q Consensus       248 ~d~vid~~g~  257 (361)
                      +|++|+++|.
T Consensus       100 iD~lv~~Ag~  109 (285)
T 2p91_A          100 LDIIVHSIAY  109 (285)
T ss_dssp             CCEEEECCCC
T ss_pred             CCEEEECCCC
Confidence            9999999984

>2d1y_A Hypothetical protein TT0321; strucrtural genomics, thermus thermophilus HB8, structural genomics, NPPSFA; HET: NAD; 1.65A {Thermus thermophilus} SCOP: c.2.1.2

Probab=97.09  E-value=0.0029  Score=55.05  Aligned_cols=73  Identities=23%  Similarity=0.360  Sum_probs=54.4

Q ss_pred             CCCEEEEEcC-ChHHHHHHHHHHHcCCeEEEEeCCchhHHHHHHHcCCCEE--ecCCCHHHHHHh-------cCCccEEE
Q 018067          183 PGMHVGVVGL-GGLGHVAVKFAKAMGVKVTVISTSPSKKSEAIERLGADSF--LVSRDQDEMQAA-------MGTMDGII  252 (361)
Q Consensus       183 ~g~~vlV~Ga-g~vG~~a~~la~~~g~~vi~~~~~~~~~~~~~~~~g~~~v--v~~~~~~~~~~~-------~~g~d~vi  252 (361)
                      .++++||.|+ |++|..+++.+...|++|++++++.++ .++.++++. ..  .|..+++.+.++       .+++|++|
T Consensus         5 ~~k~vlVTGas~gIG~~ia~~l~~~G~~V~~~~r~~~~-~~~~~~~~~-~~~~~D~~~~~~~~~~~~~~~~~~g~iD~lv   82 (256)
T 2d1y_A            5 AGKGVLVTGGARGIGRAIAQAFAREGALVALCDLRPEG-KEVAEAIGG-AFFQVDLEDERERVRFVEEAAYALGRVDVLV   82 (256)
T ss_dssp             TTCEEEEETTTSHHHHHHHHHHHHTTCEEEEEESSTTH-HHHHHHHTC-EEEECCTTCHHHHHHHHHHHHHHHSCCCEEE
T ss_pred             CCCEEEEeCCCCHHHHHHHHHHHHCCCEEEEEeCChhH-HHHHHHhhC-CEEEeeCCCHHHHHHHHHHHHHHcCCCCEEE
Confidence            4688999997 999999999999999999999998876 555555542 22  345555433332       24799999


Q ss_pred             EcCCC
Q 018067          253 DTVSA  257 (361)
Q Consensus       253 d~~g~  257 (361)
                      +++|.
T Consensus        83 ~~Ag~   87 (256)
T 2d1y_A           83 NNAAI   87 (256)
T ss_dssp             ECCCC
T ss_pred             ECCCC
Confidence            99984

>3awd_A GOX2181, putative polyol dehydrogenase; oxidoreductase; 1.80A {Gluconobacter oxydans}

Probab=97.08  E-value=0.0028  Score=55.04  Aligned_cols=75  Identities=20%  Similarity=0.297  Sum_probs=54.6

Q ss_pred             CCCEEEEEcC-ChHHHHHHHHHHHcCCeEEEEeCCchhHHHHHHHc---CCCE---EecCCCHHHHHHhc-------CCc
Q 018067          183 PGMHVGVVGL-GGLGHVAVKFAKAMGVKVTVISTSPSKKSEAIERL---GADS---FLVSRDQDEMQAAM-------GTM  248 (361)
Q Consensus       183 ~g~~vlV~Ga-g~vG~~a~~la~~~g~~vi~~~~~~~~~~~~~~~~---g~~~---vv~~~~~~~~~~~~-------~g~  248 (361)
                      .++++||.|+ |.+|..+++.+...|++|++++++.++...+.+++   +...   ..|..+++.+.++.       +++
T Consensus        12 ~~k~vlItGasggiG~~la~~l~~~G~~V~~~~r~~~~~~~~~~~l~~~~~~~~~~~~D~~~~~~~~~~~~~~~~~~~~i   91 (260)
T 3awd_A           12 DNRVAIVTGGAQNIGLACVTALAEAGARVIIADLDEAMATKAVEDLRMEGHDVSSVVMDVTNTESVQNAVRSVHEQEGRV   91 (260)
T ss_dssp             TTCEEEEETTTSHHHHHHHHHHHHTTCEEEEEESCHHHHHHHHHHHHHTTCCEEEEECCTTCHHHHHHHHHHHHHHHSCC
T ss_pred             CCCEEEEeCCCchHHHHHHHHHHHCCCEEEEEeCCHHHHHHHHHHHHhcCCceEEEEecCCCHHHHHHHHHHHHHHcCCC
Confidence            5788999997 99999999999999999999999877655443333   4321   23555555444332       479


Q ss_pred             cEEEEcCCC
Q 018067          249 DGIIDTVSA  257 (361)
Q Consensus       249 d~vid~~g~  257 (361)
                      |++|+++|.
T Consensus        92 d~vi~~Ag~  100 (260)
T 3awd_A           92 DILVACAGI  100 (260)
T ss_dssp             CEEEECCCC
T ss_pred             CEEEECCCC
Confidence            999999884

>3gaf_A 7-alpha-hydroxysteroid dehydrogenase; seattle structural genomics center for infectious disease, ssgcid, oxidoreductase, structural genomics; 2.20A {Brucella melitensis}

Probab=97.07  E-value=0.0013  Score=57.45  Aligned_cols=76  Identities=14%  Similarity=0.215  Sum_probs=56.0

Q ss_pred             CCCCEEEEEcC-ChHHHHHHHHHHHcCCeEEEEeCCchhHHHHHHHc---CCCE---EecCCCHHHHHHh-------cCC
Q 018067          182 KPGMHVGVVGL-GGLGHVAVKFAKAMGVKVTVISTSPSKKSEAIERL---GADS---FLVSRDQDEMQAA-------MGT  247 (361)
Q Consensus       182 ~~g~~vlV~Ga-g~vG~~a~~la~~~g~~vi~~~~~~~~~~~~~~~~---g~~~---vv~~~~~~~~~~~-------~~g  247 (361)
                      -.|+++||.|+ |++|.++++.+...|++|++++++.++...+.+++   +...   ..|-.+++.+.++       .++
T Consensus        10 l~~k~vlVTGas~gIG~~ia~~l~~~G~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~Dv~d~~~v~~~~~~~~~~~g~   89 (256)
T 3gaf_A           10 LNDAVAIVTGAAAGIGRAIAGTFAKAGASVVVTDLKSEGAEAVAAAIRQAGGKAIGLECNVTDEQHREAVIKAALDQFGK   89 (256)
T ss_dssp             CTTCEEEECSCSSHHHHHHHHHHHHHTCEEEEEESSHHHHHHHHHHHHHTTCCEEEEECCTTCHHHHHHHHHHHHHHHSC
T ss_pred             CCCCEEEEECCCCHHHHHHHHHHHHCCCEEEEEeCCHHHHHHHHHHHHhcCCcEEEEECCCCCHHHHHHHHHHHHHHcCC
Confidence            35789999987 99999999999999999999999987766554443   4332   2355555443332       248


Q ss_pred             ccEEEEcCCC
Q 018067          248 MDGIIDTVSA  257 (361)
Q Consensus       248 ~d~vid~~g~  257 (361)
                      +|++|+++|.
T Consensus        90 id~lv~nAg~   99 (256)
T 3gaf_A           90 ITVLVNNAGG   99 (256)
T ss_dssp             CCEEEECCCC
T ss_pred             CCEEEECCCC
Confidence            9999999985

>3svt_A Short-chain type dehydrogenase/reductase; ssgcid, seattle structural genomics center for infectious DI oxidoreductase; 2.00A {Mycobacterium ulcerans}

Probab=97.06  E-value=0.0021  Score=56.84  Aligned_cols=75  Identities=24%  Similarity=0.336  Sum_probs=55.5

Q ss_pred             CCCEEEEEcC-ChHHHHHHHHHHHcCCeEEEEeCCchhHHHHHHHc---CC---CE---EecCCCHHHHHHh-------c
Q 018067          183 PGMHVGVVGL-GGLGHVAVKFAKAMGVKVTVISTSPSKKSEAIERL---GA---DS---FLVSRDQDEMQAA-------M  245 (361)
Q Consensus       183 ~g~~vlV~Ga-g~vG~~a~~la~~~g~~vi~~~~~~~~~~~~~~~~---g~---~~---vv~~~~~~~~~~~-------~  245 (361)
                      .++++||.|+ |++|.++++.+...|++|++++++.++.....+++   +.   ..   ..|-.+++.+.++       .
T Consensus        10 ~~k~vlVTGas~gIG~aia~~l~~~G~~V~~~~r~~~~~~~~~~~l~~~~~~~~~~~~~~~Dv~~~~~v~~~~~~~~~~~   89 (281)
T 3svt_A           10 QDRTYLVTGGGSGIGKGVAAGLVAAGASVMIVGRNPDKLAGAVQELEALGANGGAIRYEPTDITNEDETARAVDAVTAWH   89 (281)
T ss_dssp             TTCEEEEETTTSHHHHHHHHHHHHTTCEEEEEESCHHHHHHHHHHHHTTCCSSCEEEEEECCTTSHHHHHHHHHHHHHHH
T ss_pred             CCCEEEEeCCCcHHHHHHHHHHHHCCCEEEEEeCCHHHHHHHHHHHHHhCCCCceEEEEeCCCCCHHHHHHHHHHHHHHc
Confidence            5789999997 99999999999999999999999987766655544   22   11   1255555443332       2


Q ss_pred             CCccEEEEcCCC
Q 018067          246 GTMDGIIDTVSA  257 (361)
Q Consensus       246 ~g~d~vid~~g~  257 (361)
                      +++|++|+++|.
T Consensus        90 g~id~lv~nAg~  101 (281)
T 3svt_A           90 GRLHGVVHCAGG  101 (281)
T ss_dssp             SCCCEEEECCCC
T ss_pred             CCCCEEEECCCc
Confidence            479999999985

>2zat_A Dehydrogenase/reductase SDR family member 4; alpha/beta, oxidoreductase; HET: NAP; 1.50A {Sus scrofa} PDB: 3o4r_A*

Probab=97.06  E-value=0.0023  Score=55.81  Aligned_cols=75  Identities=15%  Similarity=0.188  Sum_probs=54.5

Q ss_pred             CCCEEEEEcC-ChHHHHHHHHHHHcCCeEEEEeCCchhHHHHHHHc---CCCE---EecCCCHHHHHHh-------cCCc
Q 018067          183 PGMHVGVVGL-GGLGHVAVKFAKAMGVKVTVISTSPSKKSEAIERL---GADS---FLVSRDQDEMQAA-------MGTM  248 (361)
Q Consensus       183 ~g~~vlV~Ga-g~vG~~a~~la~~~g~~vi~~~~~~~~~~~~~~~~---g~~~---vv~~~~~~~~~~~-------~~g~  248 (361)
                      .++++||.|+ |++|..+++.+...|++|++++++.++..++.+++   +...   ..|..+.+.+..+       .+++
T Consensus        13 ~~k~vlVTGas~gIG~~ia~~l~~~G~~V~~~~r~~~~~~~~~~~l~~~~~~~~~~~~D~~~~~~~~~~~~~~~~~~g~i   92 (260)
T 2zat_A           13 ENKVALVTASTDGIGLAIARRLAQDGAHVVVSSRKQENVDRTVATLQGEGLSVTGTVCHVGKAEDRERLVAMAVNLHGGV   92 (260)
T ss_dssp             TTCEEEESSCSSHHHHHHHHHHHHTTCEEEEEESCHHHHHHHHHHHHHTTCCEEEEECCTTCHHHHHHHHHHHHHHHSCC
T ss_pred             CCCEEEEECCCcHHHHHHHHHHHHCCCEEEEEeCCHHHHHHHHHHHHhcCCceEEEEccCCCHHHHHHHHHHHHHHcCCC
Confidence            5788999987 99999999999999999999999887655544333   4322   2344555443332       2489


Q ss_pred             cEEEEcCCC
Q 018067          249 DGIIDTVSA  257 (361)
Q Consensus       249 d~vid~~g~  257 (361)
                      |++|+++|.
T Consensus        93 D~lv~~Ag~  101 (260)
T 2zat_A           93 DILVSNAAV  101 (260)
T ss_dssp             CEEEECCCC
T ss_pred             CEEEECCCC
Confidence            999999984

>2gn4_A FLAA1 protein, UDP-GLCNAC C6 dehydratase; rossmann fold, TYK triad, SDR, enzyme, NADP, NADPH, lyase; HET: NDP UD1 MES; 1.90A {Helicobacter pylori} PDB: 2gn6_A* 2gn8_A* 2gn9_A* 2gna_A*

Probab=97.06  E-value=0.0025  Score=58.09  Aligned_cols=77  Identities=19%  Similarity=0.182  Sum_probs=59.9

Q ss_pred             CCCCEEEEEcC-ChHHHHHHHHHHHc-CC-eEEEEeCCchhHHHHHHHcCC---C-EEecCCCHHHHHHhcCCccEEEEc
Q 018067          182 KPGMHVGVVGL-GGLGHVAVKFAKAM-GV-KVTVISTSPSKKSEAIERLGA---D-SFLVSRDQDEMQAAMGTMDGIIDT  254 (361)
Q Consensus       182 ~~g~~vlV~Ga-g~vG~~a~~la~~~-g~-~vi~~~~~~~~~~~~~~~~g~---~-~vv~~~~~~~~~~~~~g~d~vid~  254 (361)
                      -.+.+|||.|+ |.+|...++.+... |. +|+++++++++...+.+.+..   . ...|..+.+.+.++..++|+||++
T Consensus        19 ~~~k~vlVTGatG~iG~~l~~~L~~~~g~~~V~~~~r~~~~~~~~~~~~~~~~v~~~~~Dl~d~~~l~~~~~~~D~Vih~   98 (344)
T 2gn4_A           19 LDNQTILITGGTGSFGKCFVRKVLDTTNAKKIIVYSRDELKQSEMAMEFNDPRMRFFIGDVRDLERLNYALEGVDICIHA   98 (344)
T ss_dssp             TTTCEEEEETTTSHHHHHHHHHHHHHCCCSEEEEEESCHHHHHHHHHHHCCTTEEEEECCTTCHHHHHHHTTTCSEEEEC
T ss_pred             hCCCEEEEECCCcHHHHHHHHHHHhhCCCCEEEEEECChhhHHHHHHHhcCCCEEEEECCCCCHHHHHHHHhcCCEEEEC
Confidence            35789999997 99999999988887 98 999999988776666555432   2 123566777777777899999999


Q ss_pred             CCCc
Q 018067          255 VSAV  258 (361)
Q Consensus       255 ~g~~  258 (361)
                      ++..
T Consensus        99 Aa~~  102 (344)
T 2gn4_A           99 AALK  102 (344)
T ss_dssp             CCCC
T ss_pred             CCCC
Confidence            9854

>3tox_A Short chain dehydrogenase; structural genomics, PSI-biology, NEW YORK structural genomi research consortium, nysgrc, oxidoreductase; HET: NAP; 1.93A {Sinorhizobium meliloti}

Probab=97.05  E-value=0.0024  Score=56.50  Aligned_cols=75  Identities=23%  Similarity=0.304  Sum_probs=56.3

Q ss_pred             CCCEEEEEcC-ChHHHHHHHHHHHcCCeEEEEeCCchhHHHHHHHc---CCCEE---ecCCCHHHHHHh-------cCCc
Q 018067          183 PGMHVGVVGL-GGLGHVAVKFAKAMGVKVTVISTSPSKKSEAIERL---GADSF---LVSRDQDEMQAA-------MGTM  248 (361)
Q Consensus       183 ~g~~vlV~Ga-g~vG~~a~~la~~~g~~vi~~~~~~~~~~~~~~~~---g~~~v---v~~~~~~~~~~~-------~~g~  248 (361)
                      .|+++||.|+ |++|.++++.+...|++|++++++.++..++.+++   +....   .|-.+++.+..+       .+++
T Consensus         7 ~gk~vlVTGas~GIG~aia~~la~~G~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~Dv~~~~~v~~~~~~~~~~~g~i   86 (280)
T 3tox_A            7 EGKIAIVTGASSGIGRAAALLFAREGAKVVVTARNGNALAELTDEIAGGGGEAAALAGDVGDEALHEALVELAVRRFGGL   86 (280)
T ss_dssp             TTCEEEESSTTSHHHHHHHHHHHHTTCEEEECCSCHHHHHHHHHHHTTTTCCEEECCCCTTCHHHHHHHHHHHHHHHSCC
T ss_pred             CCCEEEEECCCcHHHHHHHHHHHHCCCEEEEEECCHHHHHHHHHHHHhcCCcEEEEECCCCCHHHHHHHHHHHHHHcCCC
Confidence            5788999987 99999999999999999999999988877776665   32221   244455443332       2479


Q ss_pred             cEEEEcCCC
Q 018067          249 DGIIDTVSA  257 (361)
Q Consensus       249 d~vid~~g~  257 (361)
                      |++|+++|.
T Consensus        87 D~lvnnAg~   95 (280)
T 3tox_A           87 DTAFNNAGA   95 (280)
T ss_dssp             CEEEECCCC
T ss_pred             CEEEECCCC
Confidence            999999984

>3lf2_A Short chain oxidoreductase Q9HYA2; SDR, SCOR, rossmann fold; HET: NAP; 2.30A {Pseudomonas aeruginosa} PDB: 3lf1_A*

Probab=97.05  E-value=0.0042  Score=54.31  Aligned_cols=75  Identities=16%  Similarity=0.169  Sum_probs=55.5

Q ss_pred             CCCEEEEEcC-ChHHHHHHHHHHHcCCeEEEEeCCchhHHHHHHHc----CCC-E---EecCCCHHHHHHh-------cC
Q 018067          183 PGMHVGVVGL-GGLGHVAVKFAKAMGVKVTVISTSPSKKSEAIERL----GAD-S---FLVSRDQDEMQAA-------MG  246 (361)
Q Consensus       183 ~g~~vlV~Ga-g~vG~~a~~la~~~g~~vi~~~~~~~~~~~~~~~~----g~~-~---vv~~~~~~~~~~~-------~~  246 (361)
                      .++++||.|+ +++|.++++.+...|++|++++++.++...+.+++    +.. .   ..|..+++.+..+       .+
T Consensus         7 ~~k~~lVTGas~GIG~aia~~l~~~G~~V~~~~r~~~~~~~~~~~l~~~~~~~~~~~~~~Dv~~~~~v~~~~~~~~~~~g   86 (265)
T 3lf2_A            7 SEAVAVVTGGSSGIGLATVELLLEAGAAVAFCARDGERLRAAESALRQRFPGARLFASVCDVLDALQVRAFAEACERTLG   86 (265)
T ss_dssp             TTCEEEEETCSSHHHHHHHHHHHHTTCEEEEEESCHHHHHHHHHHHHHHSTTCCEEEEECCTTCHHHHHHHHHHHHHHHC
T ss_pred             CCCEEEEeCCCChHHHHHHHHHHHCCCEEEEEeCCHHHHHHHHHHHHHhcCCceEEEEeCCCCCHHHHHHHHHHHHHHcC
Confidence            5788999997 99999999999999999999999987766554443    322 1   2355565443332       25


Q ss_pred             CccEEEEcCCC
Q 018067          247 TMDGIIDTVSA  257 (361)
Q Consensus       247 g~d~vid~~g~  257 (361)
                      ++|++|+++|.
T Consensus        87 ~id~lvnnAg~   97 (265)
T 3lf2_A           87 CASILVNNAGQ   97 (265)
T ss_dssp             SCSEEEECCCC
T ss_pred             CCCEEEECCCC
Confidence            79999999985

>3dhn_A NAD-dependent epimerase/dehydratase; reductase, PF01370, Q89Z24_bactn, NESG, BTR310, structural genomics, PSI-2; 2.00A {Bacteroides thetaiotaomicron}

Probab=97.05  E-value=0.00067  Score=57.75  Aligned_cols=94  Identities=18%  Similarity=0.221  Sum_probs=65.4

Q ss_pred             CEEEEEcC-ChHHHHHHHHHHHcCCeEEEEeCCchhHHHHHHHcCCCE-EecCCCHHHHHHhcCCccEEEEcCCCcc---
Q 018067          185 MHVGVVGL-GGLGHVAVKFAKAMGVKVTVISTSPSKKSEAIERLGADS-FLVSRDQDEMQAAMGTMDGIIDTVSAVH---  259 (361)
Q Consensus       185 ~~vlV~Ga-g~vG~~a~~la~~~g~~vi~~~~~~~~~~~~~~~~g~~~-vv~~~~~~~~~~~~~g~d~vid~~g~~~---  259 (361)
                      .+|||+|+ |.+|..+++.+...|.+|++++++.++...+.  -+... ..|..+.+.+.++..++|+||+++|...   
T Consensus         5 ~~ilItGatG~iG~~l~~~L~~~g~~V~~~~r~~~~~~~~~--~~~~~~~~Dl~d~~~~~~~~~~~d~vi~~a~~~~~~~   82 (227)
T 3dhn_A            5 KKIVLIGASGFVGSALLNEALNRGFEVTAVVRHPEKIKIEN--EHLKVKKADVSSLDEVCEVCKGADAVISAFNPGWNNP   82 (227)
T ss_dssp             CEEEEETCCHHHHHHHHHHHHTTTCEEEEECSCGGGCCCCC--TTEEEECCCTTCHHHHHHHHTTCSEEEECCCC-----
T ss_pred             CEEEEEcCCchHHHHHHHHHHHCCCEEEEEEcCcccchhcc--CceEEEEecCCCHHHHHHHhcCCCEEEEeCcCCCCCh
Confidence            57999998 99999999999999999999999876542220  11221 2255567777777779999999998641   


Q ss_pred             --------cHHHHHhccccC--CEEEEecCC
Q 018067          260 --------PLMPLIGLLKSQ--GKLVLVGAP  280 (361)
Q Consensus       260 --------~~~~~~~~l~~~--G~~v~~g~~  280 (361)
                              .....++.++..  ++++.++..
T Consensus        83 ~~~~~n~~~~~~l~~~~~~~~~~~~v~~Ss~  113 (227)
T 3dhn_A           83 DIYDETIKVYLTIIDGVKKAGVNRFLMVGGA  113 (227)
T ss_dssp             -CCSHHHHHHHHHHHHHHHTTCSEEEEECCS
T ss_pred             hHHHHHHHHHHHHHHHHHHhCCCEEEEeCCh
Confidence                    122344444433  489988764

>3guy_A Short-chain dehydrogenase/reductase SDR; structural genomics, oxidoreductase, PSI-2, protein structur initiative; 1.90A {Vibrio parahaemolyticus}

Probab=97.05  E-value=0.0021  Score=54.89  Aligned_cols=73  Identities=18%  Similarity=0.204  Sum_probs=56.2

Q ss_pred             CEEEEEcC-ChHHHHHHHHHHHcCCeEEEEeCCchhHHHHHHHcCCC---EEecCCCHHHHHHhc----CCccEEEEcCC
Q 018067          185 MHVGVVGL-GGLGHVAVKFAKAMGVKVTVISTSPSKKSEAIERLGAD---SFLVSRDQDEMQAAM----GTMDGIIDTVS  256 (361)
Q Consensus       185 ~~vlV~Ga-g~vG~~a~~la~~~g~~vi~~~~~~~~~~~~~~~~g~~---~vv~~~~~~~~~~~~----~g~d~vid~~g  256 (361)
                      +++||.|+ |++|.+++..+...|++|++++++.++...+.++++..   ...|..+.+.+.++.    ..+|++|+++|
T Consensus         2 k~vlVTGas~gIG~~~a~~l~~~G~~V~~~~r~~~~~~~~~~~~~~~~~~~~~D~~~~~~v~~~~~~~~~~~d~lv~~Ag   81 (230)
T 3guy_A            2 SLIVITGASSGLGAELAKLYDAEGKATYLTGRSESKLSTVTNCLSNNVGYRARDLASHQEVEQLFEQLDSIPSTVVHSAG   81 (230)
T ss_dssp             -CEEEESTTSHHHHHHHHHHHHTTCCEEEEESCHHHHHHHHHTCSSCCCEEECCTTCHHHHHHHHHSCSSCCSEEEECCC
T ss_pred             CEEEEecCCchHHHHHHHHHHHCCCEEEEEeCCHHHHHHHHHHHhhccCeEeecCCCHHHHHHHHHHHhhcCCEEEEeCC
Confidence            35899997 99999999999999999999999998888887776532   233556665555443    34699999998


Q ss_pred             C
Q 018067          257 A  257 (361)
Q Consensus       257 ~  257 (361)
                      .
T Consensus        82 ~   82 (230)
T 3guy_A           82 S   82 (230)
T ss_dssp             C
T ss_pred             c
Confidence            4

>2yxe_A Protein-L-isoaspartate O-methyltransferase; rossman-type fold, alpha/beta/alpha sandwich structure, STRU genomics, NPPSFA; 2.00A {Methanocaldococcus jannaschii}

Probab=97.05  E-value=0.0017  Score=54.73  Aligned_cols=100  Identities=30%  Similarity=0.308  Sum_probs=68.4

Q ss_pred             CCCCCCCEEEEEcCChHHHHHHHHHHHcC--CeEEEEeCCchhHHHHHHH---cCCCE-EecCCCHHHHHHhcCCccEEE
Q 018067          179 GLDKPGMHVGVVGLGGLGHVAVKFAKAMG--VKVTVISTSPSKKSEAIER---LGADS-FLVSRDQDEMQAAMGTMDGII  252 (361)
Q Consensus       179 ~~~~~g~~vlV~Gag~vG~~a~~la~~~g--~~vi~~~~~~~~~~~~~~~---~g~~~-vv~~~~~~~~~~~~~g~d~vi  252 (361)
                      ..++++++||.+|+| .|..+..+++..|  .+|+.++.+++....+.+.   .+... .+...+........+.+|+|+
T Consensus        73 ~~~~~~~~vLdiG~G-~G~~~~~l~~~~~~~~~v~~vD~~~~~~~~a~~~~~~~~~~~v~~~~~d~~~~~~~~~~fD~v~  151 (215)
T 2yxe_A           73 LDLKPGMKVLEIGTG-CGYHAAVTAEIVGEDGLVVSIERIPELAEKAERTLRKLGYDNVIVIVGDGTLGYEPLAPYDRIY  151 (215)
T ss_dssp             TTCCTTCEEEEECCT-TSHHHHHHHHHHCTTSEEEEEESCHHHHHHHHHHHHHHTCTTEEEEESCGGGCCGGGCCEEEEE
T ss_pred             hCCCCCCEEEEECCC-ccHHHHHHHHHhCCCCEEEEEeCCHHHHHHHHHHHHHcCCCCeEEEECCcccCCCCCCCeeEEE
Confidence            346899999999998 4889999999886  7999999887765544332   24321 111122110001134799999


Q ss_pred             EcCCCcccHHHHHhccccCCEEEEecC
Q 018067          253 DTVSAVHPLMPLIGLLKSQGKLVLVGA  279 (361)
Q Consensus       253 d~~g~~~~~~~~~~~l~~~G~~v~~g~  279 (361)
                      ....-.+....+.+.|+++|+++..-.
T Consensus       152 ~~~~~~~~~~~~~~~L~pgG~lv~~~~  178 (215)
T 2yxe_A          152 TTAAGPKIPEPLIRQLKDGGKLLMPVG  178 (215)
T ss_dssp             ESSBBSSCCHHHHHTEEEEEEEEEEES
T ss_pred             ECCchHHHHHHHHHHcCCCcEEEEEEC
Confidence            887766656789999999999987643

>1mxh_A Pteridine reductase 2; SDR topology, protein-substrate complex, oxidoreductase; HET: NAP DHF; 2.20A {Trypanosoma cruzi} SCOP: c.2.1.2 PDB: 1mxf_A*

Probab=97.04  E-value=0.002  Score=56.63  Aligned_cols=75  Identities=17%  Similarity=0.138  Sum_probs=53.6

Q ss_pred             CCCEEEEEcC-ChHHHHHHHHHHHcCCeEEEEeC-CchhHHHHHHHc----CCCE---EecCCCH----HHHHHh-----
Q 018067          183 PGMHVGVVGL-GGLGHVAVKFAKAMGVKVTVIST-SPSKKSEAIERL----GADS---FLVSRDQ----DEMQAA-----  244 (361)
Q Consensus       183 ~g~~vlV~Ga-g~vG~~a~~la~~~g~~vi~~~~-~~~~~~~~~~~~----g~~~---vv~~~~~----~~~~~~-----  244 (361)
                      .++++||.|+ |++|.+++..+...|++|+++++ +.++...+.+++    +...   ..|..+.    +.+.++     
T Consensus        10 ~~k~~lVTGas~gIG~~ia~~l~~~G~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~~Dl~~~~~~~~~~~~~~~~~~   89 (276)
T 1mxh_A           10 ECPAAVITGGARRIGHSIAVRLHQQGFRVVVHYRHSEGAAQRLVAELNAARAGSAVLCKGDLSLSSSLLDCCEDIIDCSF   89 (276)
T ss_dssp             -CCEEEETTCSSHHHHHHHHHHHHTTCEEEEEESSCHHHHHHHHHHHHHHSTTCEEEEECCCSSSTTHHHHHHHHHHHHH
T ss_pred             CCCEEEEeCCCcHHHHHHHHHHHHCCCEEEEEeCCChHHHHHHHHHHHHhcCCceEEEeccCCCccccHHHHHHHHHHHH
Confidence            4678999987 99999999999999999999999 776665554443    4322   1244444    433332     


Q ss_pred             --cCCccEEEEcCCC
Q 018067          245 --MGTMDGIIDTVSA  257 (361)
Q Consensus       245 --~~g~d~vid~~g~  257 (361)
                        .+++|++|+++|.
T Consensus        90 ~~~g~id~lv~nAg~  104 (276)
T 1mxh_A           90 RAFGRCDVLVNNASA  104 (276)
T ss_dssp             HHHSCCCEEEECCCC
T ss_pred             HhcCCCCEEEECCCC
Confidence              2479999999984

>3ucx_A Short chain dehydrogenase; ssgcid, seattle structural genomics center for infectious DI dehydrogenase, oxidoreductase; HET: 1PE; 1.85A {Mycobacterium smegmatis} SCOP: c.2.1.0

Probab=97.04  E-value=0.0018  Score=56.67  Aligned_cols=76  Identities=13%  Similarity=0.211  Sum_probs=56.7

Q ss_pred             CCCCEEEEEcC-ChHHHHHHHHHHHcCCeEEEEeCCchhHHHHHHHc---CCCE---EecCCCHHHHHHh-------cCC
Q 018067          182 KPGMHVGVVGL-GGLGHVAVKFAKAMGVKVTVISTSPSKKSEAIERL---GADS---FLVSRDQDEMQAA-------MGT  247 (361)
Q Consensus       182 ~~g~~vlV~Ga-g~vG~~a~~la~~~g~~vi~~~~~~~~~~~~~~~~---g~~~---vv~~~~~~~~~~~-------~~g  247 (361)
                      -.|+++||.|+ +++|.++++.+...|++|++++++.++..++.+++   +...   ..|-.+++.+.++       .++
T Consensus         9 l~~k~vlVTGas~gIG~aia~~l~~~G~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~Dv~~~~~v~~~~~~~~~~~g~   88 (264)
T 3ucx_A            9 LTDKVVVISGVGPALGTTLARRCAEQGADLVLAARTVERLEDVAKQVTDTGRRALSVGTDITDDAQVAHLVDETMKAYGR   88 (264)
T ss_dssp             TTTCEEEEESCCTTHHHHHHHHHHHTTCEEEEEESCHHHHHHHHHHHHHTTCCEEEEECCTTCHHHHHHHHHHHHHHTSC
T ss_pred             cCCcEEEEECCCcHHHHHHHHHHHHCcCEEEEEeCCHHHHHHHHHHHHhcCCcEEEEEcCCCCHHHHHHHHHHHHHHcCC
Confidence            46789999997 99999999999999999999999988766665543   3322   2355565544332       247


Q ss_pred             ccEEEEcCCC
Q 018067          248 MDGIIDTVSA  257 (361)
Q Consensus       248 ~d~vid~~g~  257 (361)
                      +|++|+++|.
T Consensus        89 id~lv~nAg~   98 (264)
T 3ucx_A           89 VDVVINNAFR   98 (264)
T ss_dssp             CSEEEECCCS
T ss_pred             CcEEEECCCC
Confidence            9999999975

>2cfc_A 2-(R)-hydroxypropyl-COM dehydrogenase; NAD, oxidoreductase; HET: NAD KPC; 1.8A {Xanthobacter autotrophicus}

Probab=97.03  E-value=0.0025  Score=55.05  Aligned_cols=74  Identities=19%  Similarity=0.211  Sum_probs=54.7

Q ss_pred             CCEEEEEcC-ChHHHHHHHHHHHcCCeEEEEeCCchhHHHHHHHc----CCC---EEecCCCHHHHHHhc-------CCc
Q 018067          184 GMHVGVVGL-GGLGHVAVKFAKAMGVKVTVISTSPSKKSEAIERL----GAD---SFLVSRDQDEMQAAM-------GTM  248 (361)
Q Consensus       184 g~~vlV~Ga-g~vG~~a~~la~~~g~~vi~~~~~~~~~~~~~~~~----g~~---~vv~~~~~~~~~~~~-------~g~  248 (361)
                      ++++||.|+ |.+|..++..+...|++|++++++.++...+.+++    +..   ...|..+++.+.++.       +++
T Consensus         2 ~k~vlItGasggiG~~~a~~l~~~G~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~D~~~~~~~~~~~~~~~~~~~~i   81 (250)
T 2cfc_A            2 SRVAIVTGASSGNGLAIATRFLARGDRVAALDLSAETLEETARTHWHAYADKVLRVRADVADEGDVNAAIAATMEQFGAI   81 (250)
T ss_dssp             CCEEEEETTTSHHHHHHHHHHHHTTCEEEEEESCHHHHHHHHHHHSTTTGGGEEEEECCTTCHHHHHHHHHHHHHHHSCC
T ss_pred             CCEEEEeCCCchHHHHHHHHHHHCCCEEEEEeCCHHHHHHHHHHHHHhcCCcEEEEEecCCCHHHHHHHHHHHHHHhCCC
Confidence            578999997 99999999999999999999999887766665544    322   123555555444332       479


Q ss_pred             cEEEEcCCC
Q 018067          249 DGIIDTVSA  257 (361)
Q Consensus       249 d~vid~~g~  257 (361)
                      |++|+++|.
T Consensus        82 d~li~~Ag~   90 (250)
T 2cfc_A           82 DVLVNNAGI   90 (250)
T ss_dssp             CEEEECCCC
T ss_pred             CEEEECCCC
Confidence            999999974

>3hm2_A Precorrin-6Y C5,15-methyltransferase; alpha-beta-sandwich, structural genomics, PSI-2, protein structure initiative; 2.21A {Corynebacterium diphtheriae}

Probab=97.03  E-value=0.0034  Score=50.91  Aligned_cols=99  Identities=15%  Similarity=0.181  Sum_probs=67.7

Q ss_pred             CCCCCCEEEEEcCChHHHHHHHHHHHc-CCeEEEEeCCchhHHHHHH---HcCCC--EEecCCCHHHHHHhcCCccEEEE
Q 018067          180 LDKPGMHVGVVGLGGLGHVAVKFAKAM-GVKVTVISTSPSKKSEAIE---RLGAD--SFLVSRDQDEMQAAMGTMDGIID  253 (361)
Q Consensus       180 ~~~~g~~vlV~Gag~vG~~a~~la~~~-g~~vi~~~~~~~~~~~~~~---~~g~~--~vv~~~~~~~~~~~~~g~d~vid  253 (361)
                      .++++++||-+|+|. |..+..+++.. +.+|+.++.+++....+.+   ..+..  ..+..+..+.+....+.+|+|+.
T Consensus        22 ~~~~~~~vldiG~G~-G~~~~~l~~~~~~~~v~~vD~~~~~~~~a~~~~~~~~~~~~~~~~~d~~~~~~~~~~~~D~i~~  100 (178)
T 3hm2_A           22 APKPHETLWDIGGGS-GSIAIEWLRSTPQTTAVCFEISEERRERILSNAINLGVSDRIAVQQGAPRAFDDVPDNPDVIFI  100 (178)
T ss_dssp             CCCTTEEEEEESTTT-THHHHHHHTTSSSEEEEEECSCHHHHHHHHHHHHTTTCTTSEEEECCTTGGGGGCCSCCSEEEE
T ss_pred             cccCCCeEEEeCCCC-CHHHHHHHHHCCCCeEEEEeCCHHHHHHHHHHHHHhCCCCCEEEecchHhhhhccCCCCCEEEE
Confidence            368899999999986 88899999887 5699999888766544432   33433  22222222332222367999997


Q ss_pred             cCCCc--ccHHHHHhccccCCEEEEecC
Q 018067          254 TVSAV--HPLMPLIGLLKSQGKLVLVGA  279 (361)
Q Consensus       254 ~~g~~--~~~~~~~~~l~~~G~~v~~g~  279 (361)
                      .....  ..+..+.+.|+++|+++....
T Consensus       101 ~~~~~~~~~l~~~~~~L~~gG~l~~~~~  128 (178)
T 3hm2_A          101 GGGLTAPGVFAAAWKRLPVGGRLVANAV  128 (178)
T ss_dssp             CC-TTCTTHHHHHHHTCCTTCEEEEEEC
T ss_pred             CCcccHHHHHHHHHHhcCCCCEEEEEee
Confidence            65443  358899999999999987654

>1edo_A Beta-keto acyl carrier protein reductase; nucleotide fold, rossmann fold, oxidoreductase; HET: NAP; 2.30A {Brassica napus} SCOP: c.2.1.2 PDB: 2cdh_G

Probab=97.03  E-value=0.0042  Score=53.37  Aligned_cols=74  Identities=22%  Similarity=0.259  Sum_probs=51.4

Q ss_pred             CCEEEEEcC-ChHHHHHHHHHHHcCCeEEEE-eCCchhHHHHHHH---cCCCE---EecCCCHHHHHHh-------cCCc
Q 018067          184 GMHVGVVGL-GGLGHVAVKFAKAMGVKVTVI-STSPSKKSEAIER---LGADS---FLVSRDQDEMQAA-------MGTM  248 (361)
Q Consensus       184 g~~vlV~Ga-g~vG~~a~~la~~~g~~vi~~-~~~~~~~~~~~~~---~g~~~---vv~~~~~~~~~~~-------~~g~  248 (361)
                      |+++||.|+ |.+|..+++.+...|++|+++ .++.++...+.++   .+...   ..|..+++.+.++       .+++
T Consensus         1 ~k~vlVTGasggiG~~la~~l~~~G~~v~~~~~r~~~~~~~~~~~~~~~~~~~~~~~~D~~~~~~~~~~~~~~~~~~g~i   80 (244)
T 1edo_A            1 SPVVVVTGASRGIGKAIALSLGKAGCKVLVNYARSAKAAEEVSKQIEAYGGQAITFGGDVSKEADVEAMMKTAIDAWGTI   80 (244)
T ss_dssp             CCEEEETTCSSHHHHHHHHHHHHTTCEEEEEESSCHHHHHHHHHHHHHHTCEEEEEECCTTSHHHHHHHHHHHHHHSSCC
T ss_pred             CCEEEEeCCCchHHHHHHHHHHHCCCEEEEEcCCCHHHHHHHHHHHHhcCCcEEEEeCCCCCHHHHHHHHHHHHHHcCCC
Confidence            468999987 999999999999999999985 6776655444333   24321   2355555444332       2479


Q ss_pred             cEEEEcCCC
Q 018067          249 DGIIDTVSA  257 (361)
Q Consensus       249 d~vid~~g~  257 (361)
                      |++|+++|.
T Consensus        81 d~li~~Ag~   89 (244)
T 1edo_A           81 DVVVNNAGI   89 (244)
T ss_dssp             SEEEECCCC
T ss_pred             CEEEECCCC
Confidence            999999984

>3a28_C L-2.3-butanediol dehydrogenase; chiral substrate recognition, oxidoreductase; HET: NAD; 2.00A {Brevibacterium saccharolyticum}

Probab=97.03  E-value=0.0031  Score=54.89  Aligned_cols=74  Identities=19%  Similarity=0.267  Sum_probs=53.3

Q ss_pred             CCEEEEEcC-ChHHHHHHHHHHHcCCeEEEEeCCchh--HHHHHHHc---CCCE---EecCCCHHHHHHh-------cCC
Q 018067          184 GMHVGVVGL-GGLGHVAVKFAKAMGVKVTVISTSPSK--KSEAIERL---GADS---FLVSRDQDEMQAA-------MGT  247 (361)
Q Consensus       184 g~~vlV~Ga-g~vG~~a~~la~~~g~~vi~~~~~~~~--~~~~~~~~---g~~~---vv~~~~~~~~~~~-------~~g  247 (361)
                      ++++||.|+ |++|.++++.+...|++|++++++.++  ...+.+++   +...   ..|..+++.+.++       .++
T Consensus         2 ~k~vlVTGas~gIG~~ia~~l~~~G~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~~Dv~~~~~v~~~~~~~~~~~g~   81 (258)
T 3a28_C            2 SKVAMVTGGAQGIGRGISEKLAADGFDIAVADLPQQEEQAAETIKLIEAADQKAVFVGLDVTDKANFDSAIDEAAEKLGG   81 (258)
T ss_dssp             CCEEEEETTTSHHHHHHHHHHHHHTCEEEEEECGGGHHHHHHHHHHHHTTTCCEEEEECCTTCHHHHHHHHHHHHHHHTC
T ss_pred             CCEEEEeCCCcHHHHHHHHHHHHCCCEEEEEeCCcchHHHHHHHHHHHhcCCcEEEEEccCCCHHHHHHHHHHHHHHhCC
Confidence            578999997 999999999998899999999988766  44444433   3322   2355555444332       247


Q ss_pred             ccEEEEcCCC
Q 018067          248 MDGIIDTVSA  257 (361)
Q Consensus       248 ~d~vid~~g~  257 (361)
                      +|++|+++|.
T Consensus        82 iD~lv~nAg~   91 (258)
T 3a28_C           82 FDVLVNNAGI   91 (258)
T ss_dssp             CCEEEECCCC
T ss_pred             CCEEEECCCC
Confidence            9999999985

>3sju_A Keto reductase; short-chain dehydrogenase, oxidoreductase; HET: NDP; 2.40A {Streptomyces griseoruber}

Probab=97.02  E-value=0.0034  Score=55.46  Aligned_cols=76  Identities=22%  Similarity=0.315  Sum_probs=54.9

Q ss_pred             CCCCEEEEEcC-ChHHHHHHHHHHHcCCeEEEEeCCchhHHHHHHHc---CCCE---EecCCCHHHHHHh-------cCC
Q 018067          182 KPGMHVGVVGL-GGLGHVAVKFAKAMGVKVTVISTSPSKKSEAIERL---GADS---FLVSRDQDEMQAA-------MGT  247 (361)
Q Consensus       182 ~~g~~vlV~Ga-g~vG~~a~~la~~~g~~vi~~~~~~~~~~~~~~~~---g~~~---vv~~~~~~~~~~~-------~~g  247 (361)
                      ..++++||.|+ |++|.+++..+...|++|++++++.++...+.+++   +...   ..|-.+++.+.++       .++
T Consensus        22 ~~~k~~lVTGas~GIG~aia~~la~~G~~V~~~~r~~~~~~~~~~~l~~~~~~~~~~~~Dv~d~~~v~~~~~~~~~~~g~  101 (279)
T 3sju_A           22 SRPQTAFVTGVSSGIGLAVARTLAARGIAVYGCARDAKNVSAAVDGLRAAGHDVDGSSCDVTSTDEVHAAVAAAVERFGP  101 (279)
T ss_dssp             ---CEEEEESTTSHHHHHHHHHHHHTTCEEEEEESCHHHHHHHHHHHHTTTCCEEEEECCTTCHHHHHHHHHHHHHHHCS
T ss_pred             cCCCEEEEeCCCCHHHHHHHHHHHHCCCEEEEEeCCHHHHHHHHHHHHhcCCcEEEEECCCCCHHHHHHHHHHHHHHcCC
Confidence            35789999997 99999999999999999999999988766665544   3332   2355555443332       247


Q ss_pred             ccEEEEcCCC
Q 018067          248 MDGIIDTVSA  257 (361)
Q Consensus       248 ~d~vid~~g~  257 (361)
                      +|++|+++|.
T Consensus       102 id~lv~nAg~  111 (279)
T 3sju_A          102 IGILVNSAGR  111 (279)
T ss_dssp             CCEEEECCCC
T ss_pred             CcEEEECCCC
Confidence            9999999985

>1wwk_A Phosphoglycerate dehydrogenase; riken structural genomics/proteomics initiative, RSGI, structural genomics, oxidoreductase; HET: NAD; 1.90A {Pyrococcus horikoshii}

Probab=97.02  E-value=0.0027  Score=57.02  Aligned_cols=89  Identities=19%  Similarity=0.365  Sum_probs=67.3

Q ss_pred             CCCCEEEEEcCChHHHHHHHHHHHcCCeEEEEeCCchhHHHHHHHcCCCEEecCCCHHHHHHhcCCccEEEEcCCCcc--
Q 018067          182 KPGMHVGVVGLGGLGHVAVKFAKAMGVKVTVISTSPSKKSEAIERLGADSFLVSRDQDEMQAAMGTMDGIIDTVSAVH--  259 (361)
Q Consensus       182 ~~g~~vlV~Gag~vG~~a~~la~~~g~~vi~~~~~~~~~~~~~~~~g~~~vv~~~~~~~~~~~~~g~d~vid~~g~~~--  259 (361)
                      -.|.+|.|+|.|.+|...++.++.+|++|++.+++.++ . ...++|+...    +   +.++....|+|+.++....  
T Consensus       140 l~g~~vgIiG~G~IG~~~A~~l~~~G~~V~~~d~~~~~-~-~~~~~g~~~~----~---l~ell~~aDvV~l~~p~~~~t  210 (307)
T 1wwk_A          140 LEGKTIGIIGFGRIGYQVAKIANALGMNILLYDPYPNE-E-RAKEVNGKFV----D---LETLLKESDVVTIHVPLVEST  210 (307)
T ss_dssp             CTTCEEEEECCSHHHHHHHHHHHHTTCEEEEECSSCCH-H-HHHHTTCEEC----C---HHHHHHHCSEEEECCCCSTTT
T ss_pred             cCCceEEEEccCHHHHHHHHHHHHCCCEEEEECCCCCh-h-hHhhcCcccc----C---HHHHHhhCCEEEEecCCChHH
Confidence            36889999999999999999999999999999988765 3 3356776421    2   2233346899999887422  


Q ss_pred             --cH-HHHHhccccCCEEEEecC
Q 018067          260 --PL-MPLIGLLKSQGKLVLVGA  279 (361)
Q Consensus       260 --~~-~~~~~~l~~~G~~v~~g~  279 (361)
                        .+ ...+..+++++.++.++.
T Consensus       211 ~~li~~~~l~~mk~ga~lin~ar  233 (307)
T 1wwk_A          211 YHLINEERLKLMKKTAILINTSR  233 (307)
T ss_dssp             TTCBCHHHHHHSCTTCEEEECSC
T ss_pred             hhhcCHHHHhcCCCCeEEEECCC
Confidence              12 356788999999999976

>4ibo_A Gluconate dehydrogenase; enzyme function initiative structural genomics, oxidoreductase; 2.10A {Agrobacterium fabrum}

Probab=97.02  E-value=0.0028  Score=55.73  Aligned_cols=76  Identities=20%  Similarity=0.299  Sum_probs=56.0

Q ss_pred             CCCCEEEEEcC-ChHHHHHHHHHHHcCCeEEEEeCCchhHHHHHHHc---CCCEE---ecCCCHHHHHHh-------cCC
Q 018067          182 KPGMHVGVVGL-GGLGHVAVKFAKAMGVKVTVISTSPSKKSEAIERL---GADSF---LVSRDQDEMQAA-------MGT  247 (361)
Q Consensus       182 ~~g~~vlV~Ga-g~vG~~a~~la~~~g~~vi~~~~~~~~~~~~~~~~---g~~~v---v~~~~~~~~~~~-------~~g  247 (361)
                      -.|+++||.|+ |++|.++++.+...|++|++++++.++..++.+++   |....   .|..+++.+.++       .++
T Consensus        24 l~gk~~lVTGas~gIG~aia~~la~~G~~V~~~~r~~~~~~~~~~~l~~~~~~~~~~~~Dv~d~~~v~~~~~~~~~~~g~  103 (271)
T 4ibo_A           24 LGGRTALVTGSSRGLGRAMAEGLAVAGARILINGTDPSRVAQTVQEFRNVGHDAEAVAFDVTSESEIIEAFARLDEQGID  103 (271)
T ss_dssp             CTTCEEEETTCSSHHHHHHHHHHHHTTCEEEECCSCHHHHHHHHHHHHHTTCCEEECCCCTTCHHHHHHHHHHHHHHTCC
T ss_pred             CCCCEEEEeCCCcHHHHHHHHHHHHCCCEEEEEeCCHHHHHHHHHHHHhcCCceEEEEcCCCCHHHHHHHHHHHHHHCCC
Confidence            35789999987 99999999999999999999999887766665544   43322   244555443332       247


Q ss_pred             ccEEEEcCCC
Q 018067          248 MDGIIDTVSA  257 (361)
Q Consensus       248 ~d~vid~~g~  257 (361)
                      +|++|+++|.
T Consensus       104 iD~lv~nAg~  113 (271)
T 4ibo_A          104 VDILVNNAGI  113 (271)
T ss_dssp             CCEEEECCCC
T ss_pred             CCEEEECCCC
Confidence            9999999985

>1e7w_A Pteridine reductase; dihydrofolate reductase, shortchain dehydrogenase, methotrexate resistance, oxidoreductase; HET: NDP MTX; 1.75A {Leishmania major} SCOP: c.2.1.2 PDB: 1w0c_A* 1e92_A* 2bf7_A* 2bfa_A* 2bfm_A* 2bfo_A* 2bfp_A* 2p8k_A* 3h4v_A* 2xox_A 1p33_A*

Probab=97.01  E-value=0.0027  Score=56.44  Aligned_cols=44  Identities=18%  Similarity=0.061  Sum_probs=36.9

Q ss_pred             CCCEEEEEcC-ChHHHHHHHHHHHcCCeEEEEe-CCchhHHHHHHH
Q 018067          183 PGMHVGVVGL-GGLGHVAVKFAKAMGVKVTVIS-TSPSKKSEAIER  226 (361)
Q Consensus       183 ~g~~vlV~Ga-g~vG~~a~~la~~~g~~vi~~~-~~~~~~~~~~~~  226 (361)
                      .++++||.|+ |++|.++++.+...|++|++++ ++.++...+.++
T Consensus         8 ~~k~~lVTGas~GIG~aia~~la~~G~~V~~~~~r~~~~~~~~~~~   53 (291)
T 1e7w_A            8 TVPVALVTGAAKRLGRSIAEGLHAEGYAVCLHYHRSAAEANALSAT   53 (291)
T ss_dssp             CCCEEEETTCSSHHHHHHHHHHHHTTCEEEEEESSCHHHHHHHHHH
T ss_pred             CCCEEEEECCCchHHHHHHHHHHHCCCeEEEEcCCCHHHHHHHHHH
Confidence            4678999987 9999999999999999999999 887766555443

>1xq1_A Putative tropinone reducatse; structural genomics, protein structure initiative, CESG, AT1 reductively methylated protein; 2.10A {Arabidopsis thaliana} SCOP: c.2.1.2 PDB: 2q45_A

Probab=97.01  E-value=0.003  Score=55.12  Aligned_cols=75  Identities=21%  Similarity=0.295  Sum_probs=54.7

Q ss_pred             CCCEEEEEcC-ChHHHHHHHHHHHcCCeEEEEeCCchhHHHHHHHc---CCCE---EecCCCHHHHHHhc--------CC
Q 018067          183 PGMHVGVVGL-GGLGHVAVKFAKAMGVKVTVISTSPSKKSEAIERL---GADS---FLVSRDQDEMQAAM--------GT  247 (361)
Q Consensus       183 ~g~~vlV~Ga-g~vG~~a~~la~~~g~~vi~~~~~~~~~~~~~~~~---g~~~---vv~~~~~~~~~~~~--------~g  247 (361)
                      .++++||.|+ |.+|..+++.+...|++|++++++.++...+.+++   +...   ..|..+.+.+.++.        ++
T Consensus        13 ~~k~vlITGasggiG~~la~~l~~~G~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~D~~~~~~~~~~~~~~~~~~~~~   92 (266)
T 1xq1_A           13 KAKTVLVTGGTKGIGHAIVEEFAGFGAVIHTCARNEYELNECLSKWQKKGFQVTGSVCDASLRPEREKLMQTVSSMFGGK   92 (266)
T ss_dssp             TTCEEEETTTTSHHHHHHHHHHHHTTCEEEEEESCHHHHHHHHHHHHHTTCCEEEEECCTTSHHHHHHHHHHHHHHHTTC
T ss_pred             CCCEEEEECCCCHHHHHHHHHHHHCCCEEEEEeCCHHHHHHHHHHHHhcCCeeEEEECCCCCHHHHHHHHHHHHHHhCCC
Confidence            5688999987 99999999999999999999999877665554433   4321   23445554443332        67


Q ss_pred             ccEEEEcCCC
Q 018067          248 MDGIIDTVSA  257 (361)
Q Consensus       248 ~d~vid~~g~  257 (361)
                      +|++|+++|.
T Consensus        93 id~li~~Ag~  102 (266)
T 1xq1_A           93 LDILINNLGA  102 (266)
T ss_dssp             CSEEEEECCC
T ss_pred             CcEEEECCCC
Confidence            9999999985

>3ppi_A 3-hydroxyacyl-COA dehydrogenase type-2; ssgcid, dehydrogenas mycobacterium avium, structural genomics; 2.00A {Mycobacterium avium}

Probab=97.00  E-value=0.0022  Score=56.63  Aligned_cols=73  Identities=25%  Similarity=0.321  Sum_probs=56.4

Q ss_pred             CCCEEEEEcC-ChHHHHHHHHHHHcCCeEEEEeCCchhHHHHHHHcCCCE---EecCCCHHHHHHhc------CCccEEE
Q 018067          183 PGMHVGVVGL-GGLGHVAVKFAKAMGVKVTVISTSPSKKSEAIERLGADS---FLVSRDQDEMQAAM------GTMDGII  252 (361)
Q Consensus       183 ~g~~vlV~Ga-g~vG~~a~~la~~~g~~vi~~~~~~~~~~~~~~~~g~~~---vv~~~~~~~~~~~~------~g~d~vi  252 (361)
                      .|+++||.|+ |++|.++++.+...|++|++++++.++..++.++++...   ..|..+.+.+.++.      ++.|++|
T Consensus        29 ~~k~vlVTGas~GIG~aia~~l~~~G~~Vi~~~r~~~~~~~~~~~~~~~~~~~~~Dl~~~~~v~~~~~~~~~~~~id~lv  108 (281)
T 3ppi_A           29 EGASAIVSGGAGGLGEATVRRLHADGLGVVIADLAAEKGKALADELGNRAEFVSTNVTSEDSVLAAIEAANQLGRLRYAV  108 (281)
T ss_dssp             TTEEEEEETTTSHHHHHHHHHHHHTTCEEEEEESCHHHHHHHHHHHCTTEEEEECCTTCHHHHHHHHHHHTTSSEEEEEE
T ss_pred             CCCEEEEECCCChHHHHHHHHHHHCCCEEEEEeCChHHHHHHHHHhCCceEEEEcCCCCHHHHHHHHHHHHHhCCCCeEE
Confidence            5788999998 999999999999999999999999988888878877542   23455554433321      3689999


Q ss_pred             EcC
Q 018067          253 DTV  255 (361)
Q Consensus       253 d~~  255 (361)
                      .+.
T Consensus       109 ~~a  111 (281)
T 3ppi_A          109 VAH  111 (281)
T ss_dssp             ECC
T ss_pred             Ecc
Confidence            983

>3afn_B Carbonyl reductase; alpha/beta/alpha, rossmann-fold, oxidoreductase; HET: NAP; 1.63A {Sphingomonas SP} PDB: 3afm_A*

Probab=96.99  E-value=0.0023  Score=55.41  Aligned_cols=75  Identities=23%  Similarity=0.383  Sum_probs=54.1

Q ss_pred             CCCEEEEEcC-ChHHHHHHHHHHHcCCeEEEEeCC-chhHHHHHHHc---CCCE---EecCCCHHHHHHhc-------CC
Q 018067          183 PGMHVGVVGL-GGLGHVAVKFAKAMGVKVTVISTS-PSKKSEAIERL---GADS---FLVSRDQDEMQAAM-------GT  247 (361)
Q Consensus       183 ~g~~vlV~Ga-g~vG~~a~~la~~~g~~vi~~~~~-~~~~~~~~~~~---g~~~---vv~~~~~~~~~~~~-------~g  247 (361)
                      .++++||.|+ |.+|..++..+...|++|++++++ .++...+.+++   +...   ..|..+++.+.++.       ++
T Consensus         6 ~~k~vlVTGasggiG~~~a~~l~~~G~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~D~~~~~~~~~~~~~~~~~~g~   85 (258)
T 3afn_B            6 KGKRVLITGSSQGIGLATARLFARAGAKVGLHGRKAPANIDETIASMRADGGDAAFFAADLATSEACQQLVDEFVAKFGG   85 (258)
T ss_dssp             TTCEEEETTCSSHHHHHHHHHHHHTTCEEEEEESSCCTTHHHHHHHHHHTTCEEEEEECCTTSHHHHHHHHHHHHHHHSS
T ss_pred             CCCEEEEeCCCChHHHHHHHHHHHCCCEEEEECCCchhhHHHHHHHHHhcCCceEEEECCCCCHHHHHHHHHHHHHHcCC
Confidence            4678999987 999999999999999999999998 66555544433   4321   23555555444332       38


Q ss_pred             ccEEEEcCCC
Q 018067          248 MDGIIDTVSA  257 (361)
Q Consensus       248 ~d~vid~~g~  257 (361)
                      +|++|+++|.
T Consensus        86 id~vi~~Ag~   95 (258)
T 3afn_B           86 IDVLINNAGG   95 (258)
T ss_dssp             CSEEEECCCC
T ss_pred             CCEEEECCCC
Confidence            9999999985

>3asu_A Short-chain dehydrogenase/reductase SDR; SDR family, rossmann-fold, short-chain dehydrogenase/reducta ALLO-threonine dehydrogenase; 1.90A {Escherichia coli} PDB: 3asv_A*

Probab=96.99  E-value=0.0023  Score=55.43  Aligned_cols=73  Identities=21%  Similarity=0.297  Sum_probs=55.5

Q ss_pred             CEEEEEcC-ChHHHHHHHHHHHcCCeEEEEeCCchhHHHHHHHcCCCE---EecCCCHHHHHHhc-------CCccEEEE
Q 018067          185 MHVGVVGL-GGLGHVAVKFAKAMGVKVTVISTSPSKKSEAIERLGADS---FLVSRDQDEMQAAM-------GTMDGIID  253 (361)
Q Consensus       185 ~~vlV~Ga-g~vG~~a~~la~~~g~~vi~~~~~~~~~~~~~~~~g~~~---vv~~~~~~~~~~~~-------~g~d~vid  253 (361)
                      +++||.|+ |++|.++++.+...|++|++++++.++...+.++++...   ..|-.+++.+.++.       +++|++|+
T Consensus         1 k~vlVTGas~gIG~aia~~l~~~G~~V~~~~r~~~~~~~~~~~~~~~~~~~~~Dv~~~~~v~~~~~~~~~~~g~iD~lvn   80 (248)
T 3asu_A            1 MIVLVTGATAGFGECITRRFIQQGHKVIATGRRQERLQELKDELGDNLYIAQLDVRNRAAIEEMLASLPAEWCNIDILVN   80 (248)
T ss_dssp             CEEEETTTTSTTHHHHHHHHHHTTCEEEEEESCHHHHHHHHHHHCTTEEEEECCTTCHHHHHHHHHTSCTTTCCCCEEEE
T ss_pred             CEEEEECCCChHHHHHHHHHHHCCCEEEEEeCCHHHHHHHHHHhcCceEEEEcCCCCHHHHHHHHHHHHHhCCCCCEEEE
Confidence            36888887 999999999999999999999999887777766665432   23556655554432       37999999


Q ss_pred             cCCC
Q 018067          254 TVSA  257 (361)
Q Consensus       254 ~~g~  257 (361)
                      ++|.
T Consensus        81 nAg~   84 (248)
T 3asu_A           81 NAGL   84 (248)
T ss_dssp             CCCC
T ss_pred             CCCc
Confidence            9984

>3p19_A BFPVVD8, putative blue fluorescent protein; rossmann-fold, oxidoreductase; HET: NAP; 2.05A {Vibrio vulnificus}

Probab=96.98  E-value=0.00083  Score=59.02  Aligned_cols=74  Identities=14%  Similarity=0.169  Sum_probs=52.3

Q ss_pred             CCCEEEEEcC-ChHHHHHHHHHHHcCCeEEEEeCCchhHHHHHHHcCCC-EEecCCCHHHHHHh-------cCCccEEEE
Q 018067          183 PGMHVGVVGL-GGLGHVAVKFAKAMGVKVTVISTSPSKKSEAIERLGAD-SFLVSRDQDEMQAA-------MGTMDGIID  253 (361)
Q Consensus       183 ~g~~vlV~Ga-g~vG~~a~~la~~~g~~vi~~~~~~~~~~~~~~~~g~~-~vv~~~~~~~~~~~-------~~g~d~vid  253 (361)
                      .++++||.|+ |++|..++..+...|++|++++++.++...+... ... ...|-.+.+.+.++       .+++|++|+
T Consensus        15 ~~k~vlVTGas~gIG~aia~~l~~~G~~V~~~~r~~~~~~~~~~~-~~~~~~~Dv~d~~~v~~~~~~~~~~~g~iD~lvn   93 (266)
T 3p19_A           15 MKKLVVITGASSGIGEAIARRFSEEGHPLLLLARRVERLKALNLP-NTLCAQVDVTDKYTFDTAITRAEKIYGPADAIVN   93 (266)
T ss_dssp             CCCEEEEESTTSHHHHHHHHHHHHTTCCEEEEESCHHHHHTTCCT-TEEEEECCTTCHHHHHHHHHHHHHHHCSEEEEEE
T ss_pred             CCCEEEEECCCCHHHHHHHHHHHHCCCEEEEEECCHHHHHHhhcC-CceEEEecCCCHHHHHHHHHHHHHHCCCCCEEEE
Confidence            5688999997 9999999999999999999999987654333111 111 12355555443332       248999999


Q ss_pred             cCCC
Q 018067          254 TVSA  257 (361)
Q Consensus       254 ~~g~  257 (361)
                      ++|.
T Consensus        94 nAg~   97 (266)
T 3p19_A           94 NAGM   97 (266)
T ss_dssp             CCCC
T ss_pred             CCCc
Confidence            9985

>1xkq_A Short-chain reductase family member (5D234); parrallel beta-sheet of seven strands in the order 3214567; HET: NDP; 2.10A {Caenorhabditis elegans} SCOP: c.2.1.2

Probab=96.98  E-value=0.0018  Score=57.16  Aligned_cols=75  Identities=19%  Similarity=0.319  Sum_probs=54.9

Q ss_pred             CCCEEEEEcC-ChHHHHHHHHHHHcCCeEEEEeCCchhHHHHHHHc---CC---CE---EecCCCHHHHHHh-------c
Q 018067          183 PGMHVGVVGL-GGLGHVAVKFAKAMGVKVTVISTSPSKKSEAIERL---GA---DS---FLVSRDQDEMQAA-------M  245 (361)
Q Consensus       183 ~g~~vlV~Ga-g~vG~~a~~la~~~g~~vi~~~~~~~~~~~~~~~~---g~---~~---vv~~~~~~~~~~~-------~  245 (361)
                      .++++||.|+ |++|..+++.+...|++|++++++.++..++.+++   +.   ..   ..|-.+++.+.++       .
T Consensus         5 ~~k~vlVTGas~gIG~~ia~~l~~~G~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~~~Dv~~~~~v~~~~~~~~~~~   84 (280)
T 1xkq_A            5 SNKTVIITGSSNGIGRTTAILFAQEGANVTITGRSSERLEETRQIILKSGVSEKQVNSVVADVTTEDGQDQIINSTLKQF   84 (280)
T ss_dssp             TTCEEEETTCSSHHHHHHHHHHHHTTCEEEEEESCHHHHHHHHHHHHTTTCCGGGEEEEECCTTSHHHHHHHHHHHHHHH
T ss_pred             CCCEEEEECCCChHHHHHHHHHHHCCCEEEEEeCCHHHHHHHHHHHHHcCCCCcceEEEEecCCCHHHHHHHHHHHHHhc
Confidence            4678999987 99999999999999999999999987766654443   22   21   2355555444332       2


Q ss_pred             CCccEEEEcCCC
Q 018067          246 GTMDGIIDTVSA  257 (361)
Q Consensus       246 ~g~d~vid~~g~  257 (361)
                      +++|++|+++|.
T Consensus        85 g~iD~lv~nAg~   96 (280)
T 1xkq_A           85 GKIDVLVNNAGA   96 (280)
T ss_dssp             SCCCEEEECCCC
T ss_pred             CCCCEEEECCCC
Confidence            479999999984

>3jyo_A Quinate/shikimate dehydrogenase; enzyme-cofactor complex, amino-acid biosynthesis, aromatic A biosynthesis, NAD, oxidoreductase; HET: NAD; 1.00A {Corynebacterium glutamicum} PDB: 3jyp_A* 3jyq_A* 2nlo_A

Probab=96.97  E-value=0.00091  Score=59.30  Aligned_cols=103  Identities=17%  Similarity=0.131  Sum_probs=67.4

Q ss_pred             HhhhcCCCCCCCEEEEEcCChHHHHHHHHHHHcCC-eEEEEeCCchhHHHHHHHcCC-----CE-EecCCCHHHHHHhcC
Q 018067          174 PLRFYGLDKPGMHVGVVGLGGLGHVAVKFAKAMGV-KVTVISTSPSKKSEAIERLGA-----DS-FLVSRDQDEMQAAMG  246 (361)
Q Consensus       174 ~l~~~~~~~~g~~vlV~Gag~vG~~a~~la~~~g~-~vi~~~~~~~~~~~~~~~~g~-----~~-vv~~~~~~~~~~~~~  246 (361)
                      ++.....--.+++++|+|+|++|.+++..+...|+ +|+++.++.++.+.++++++.     .. .++..+   +.+...
T Consensus       117 ~l~~~~~~l~~k~vlVlGaGG~g~aia~~L~~~G~~~v~i~~R~~~~a~~la~~~~~~~~~~~i~~~~~~~---l~~~l~  193 (283)
T 3jyo_A          117 GMEEGLPNAKLDSVVQVGAGGVGNAVAYALVTHGVQKLQVADLDTSRAQALADVINNAVGREAVVGVDARG---IEDVIA  193 (283)
T ss_dssp             HHHHHCTTCCCSEEEEECCSHHHHHHHHHHHHTTCSEEEEECSSHHHHHHHHHHHHHHHTSCCEEEECSTT---HHHHHH
T ss_pred             HHHHhCcCcCCCEEEEECCcHHHHHHHHHHHHCCCCEEEEEECCHHHHHHHHHHHHhhcCCceEEEcCHHH---HHHHHh
Confidence            34433322468899999999999999999999999 799999998887777666542     11 222222   223334


Q ss_pred             CccEEEEcCCCccc----HHHHHhccccCCEEEEecC
Q 018067          247 TMDGIIDTVSAVHP----LMPLIGLLKSQGKLVLVGA  279 (361)
Q Consensus       247 g~d~vid~~g~~~~----~~~~~~~l~~~G~~v~~g~  279 (361)
                      .+|+||++++....    .......++++..++++-.
T Consensus       194 ~~DiVInaTp~Gm~~~~~~pi~~~~l~~~~~v~DlvY  230 (283)
T 3jyo_A          194 AADGVVNATPMGMPAHPGTAFDVSCLTKDHWVGDVVY  230 (283)
T ss_dssp             HSSEEEECSSTTSTTSCSCSSCGGGCCTTCEEEECCC
T ss_pred             cCCEEEECCCCCCCCCCCCCCCHHHhCCCCEEEEecC
Confidence            68999999864210    0112445667666666644

>3lbf_A Protein-L-isoaspartate O-methyltransferase; modified rossman-type fold, S-adenosyl-L- methionine; HET: SAH; 1.80A {Escherichia coli}

Probab=96.96  E-value=0.0023  Score=53.69  Aligned_cols=99  Identities=22%  Similarity=0.118  Sum_probs=67.7

Q ss_pred             CCCCCCCEEEEEcCChHHHHHHHHHHHcCCeEEEEeCCchhHHHHHHH---cCCCE-EecCCCHHHHHHhcCCccEEEEc
Q 018067          179 GLDKPGMHVGVVGLGGLGHVAVKFAKAMGVKVTVISTSPSKKSEAIER---LGADS-FLVSRDQDEMQAAMGTMDGIIDT  254 (361)
Q Consensus       179 ~~~~~g~~vlV~Gag~vG~~a~~la~~~g~~vi~~~~~~~~~~~~~~~---~g~~~-vv~~~~~~~~~~~~~g~d~vid~  254 (361)
                      ..++++++||-+|+|. |..+..+++. +.+|+.++.+++....+.+.   .+... -+...+........+.+|+|+..
T Consensus        73 l~~~~~~~vLdiG~G~-G~~~~~la~~-~~~v~~vD~~~~~~~~a~~~~~~~~~~~v~~~~~d~~~~~~~~~~~D~i~~~  150 (210)
T 3lbf_A           73 LELTPQSRVLEIGTGS-GYQTAILAHL-VQHVCSVERIKGLQWQARRRLKNLDLHNVSTRHGDGWQGWQARAPFDAIIVT  150 (210)
T ss_dssp             TTCCTTCEEEEECCTT-SHHHHHHHHH-SSEEEEEESCHHHHHHHHHHHHHTTCCSEEEEESCGGGCCGGGCCEEEEEES
T ss_pred             cCCCCCCEEEEEcCCC-CHHHHHHHHh-CCEEEEEecCHHHHHHHHHHHHHcCCCceEEEECCcccCCccCCCccEEEEc
Confidence            3468999999999984 8888888888 78999999988765554332   34321 11122211111113579999987


Q ss_pred             CCCcccHHHHHhccccCCEEEEecC
Q 018067          255 VSAVHPLMPLIGLLKSQGKLVLVGA  279 (361)
Q Consensus       255 ~g~~~~~~~~~~~l~~~G~~v~~g~  279 (361)
                      ..-......+.+.|+++|+++..-.
T Consensus       151 ~~~~~~~~~~~~~L~pgG~lv~~~~  175 (210)
T 3lbf_A          151 AAPPEIPTALMTQLDEGGILVLPVG  175 (210)
T ss_dssp             SBCSSCCTHHHHTEEEEEEEEEEEC
T ss_pred             cchhhhhHHHHHhcccCcEEEEEEc
Confidence            7666656788999999999887643

>2dtx_A Glucose 1-dehydrogenase related protein; rossmann fold, oxidoreductase; HET: BMA; 1.60A {Thermoplasma acidophilum} PDB: 2dtd_A* 2dte_A* 2zk7_A

Probab=96.96  E-value=0.007  Score=52.91  Aligned_cols=69  Identities=19%  Similarity=0.192  Sum_probs=50.1

Q ss_pred             CCCEEEEEcC-ChHHHHHHHHHHHcCCeEEEEeCCchhHHHHHHHcCCC-EEecCCCHHHHHHh-------cCCccEEEE
Q 018067          183 PGMHVGVVGL-GGLGHVAVKFAKAMGVKVTVISTSPSKKSEAIERLGAD-SFLVSRDQDEMQAA-------MGTMDGIID  253 (361)
Q Consensus       183 ~g~~vlV~Ga-g~vG~~a~~la~~~g~~vi~~~~~~~~~~~~~~~~g~~-~vv~~~~~~~~~~~-------~~g~d~vid  253 (361)
                      .++++||.|+ |++|..++..+...|++|++++++.++      .-.+. ...|..+++.+.++       .+++|++|+
T Consensus         7 ~~k~vlVTGas~gIG~~ia~~l~~~G~~V~~~~r~~~~------~~~~~~~~~Dl~~~~~v~~~~~~~~~~~g~iD~lv~   80 (264)
T 2dtx_A            7 RDKVVIVTGASMGIGRAIAERFVDEGSKVIDLSIHDPG------EAKYDHIECDVTNPDQVKASIDHIFKEYGSISVLVN   80 (264)
T ss_dssp             TTCEEEEESCSSHHHHHHHHHHHHTTCEEEEEESSCCC------SCSSEEEECCTTCHHHHHHHHHHHHHHHSCCCEEEE
T ss_pred             CCCEEEEeCCCCHHHHHHHHHHHHCCCEEEEEecCccc------CCceEEEEecCCCHHHHHHHHHHHHHHcCCCCEEEE
Confidence            4678999997 999999999999999999999987654      11121 12355555544332       247999999


Q ss_pred             cCCC
Q 018067          254 TVSA  257 (361)
Q Consensus       254 ~~g~  257 (361)
                      ++|.
T Consensus        81 ~Ag~   84 (264)
T 2dtx_A           81 NAGI   84 (264)
T ss_dssp             CCCC
T ss_pred             CCCC
Confidence            9984

>1xhl_A Short-chain dehydrogenase/reductase family member putative tropinone reductase-II...; parallel beta-sheet of seven strands in the order 3214567; HET: NDP TNE; 2.40A {Caenorhabditis elegans} SCOP: c.2.1.2

Probab=96.96  E-value=0.0019  Score=57.65  Aligned_cols=75  Identities=19%  Similarity=0.334  Sum_probs=54.7

Q ss_pred             CCCEEEEEcC-ChHHHHHHHHHHHcCCeEEEEeCCchhHHHHHHHc---CC---CE---EecCCCHHHHHHh-------c
Q 018067          183 PGMHVGVVGL-GGLGHVAVKFAKAMGVKVTVISTSPSKKSEAIERL---GA---DS---FLVSRDQDEMQAA-------M  245 (361)
Q Consensus       183 ~g~~vlV~Ga-g~vG~~a~~la~~~g~~vi~~~~~~~~~~~~~~~~---g~---~~---vv~~~~~~~~~~~-------~  245 (361)
                      .++++||.|+ |++|.+++..+...|++|++++++.++...+.+++   +.   ..   ..|..+++.+.++       .
T Consensus        25 ~~k~vlVTGas~gIG~aia~~L~~~G~~V~~~~r~~~~~~~~~~~l~~~~~~~~~~~~~~~Dv~d~~~v~~~~~~~~~~~  104 (297)
T 1xhl_A           25 SGKSVIITGSSNGIGRSAAVIFAKEGAQVTITGRNEDRLEETKQQILKAGVPAEKINAVVADVTEASGQDDIINTTLAKF  104 (297)
T ss_dssp             TTCEEEETTCSSHHHHHHHHHHHHTTCEEEEEESCHHHHHHHHHHHHHTTCCGGGEEEEECCTTSHHHHHHHHHHHHHHH
T ss_pred             CCCEEEEeCCCcHHHHHHHHHHHHCCCEEEEEeCCHHHHHHHHHHHHhcCCCCceEEEEecCCCCHHHHHHHHHHHHHhc
Confidence            4688999987 99999999999999999999999887765554433   32   21   2355555444332       2


Q ss_pred             CCccEEEEcCCC
Q 018067          246 GTMDGIIDTVSA  257 (361)
Q Consensus       246 ~g~d~vid~~g~  257 (361)
                      +++|++|+++|.
T Consensus       105 g~iD~lvnnAG~  116 (297)
T 1xhl_A          105 GKIDILVNNAGA  116 (297)
T ss_dssp             SCCCEEEECCCC
T ss_pred             CCCCEEEECCCc
Confidence            479999999984

>1id1_A Putative potassium channel protein; RCK domain, E.coli potassium channel, BK channel, rossmann fold, membrane protein; 2.40A {Escherichia coli} SCOP: c.2.1.9

Probab=96.95  E-value=0.0066  Score=48.22  Aligned_cols=93  Identities=25%  Similarity=0.188  Sum_probs=62.5

Q ss_pred             CCEEEEEcCChHHHHHHHHHHHcCCeEEEEeCCc-hhHHHHHHHc--CCCEEe-cCCCHHHHHHh-cCCccEEEEcCCCc
Q 018067          184 GMHVGVVGLGGLGHVAVKFAKAMGVKVTVISTSP-SKKSEAIERL--GADSFL-VSRDQDEMQAA-MGTMDGIIDTVSAV  258 (361)
Q Consensus       184 g~~vlV~Gag~vG~~a~~la~~~g~~vi~~~~~~-~~~~~~~~~~--g~~~vv-~~~~~~~~~~~-~~g~d~vid~~g~~  258 (361)
                      ..+++|+|+|.+|...++.+...|.+|+++++++ ++...+.+.+  |...+. |..+++.+.+. ..++|+|+-+++..
T Consensus         3 ~~~vlI~G~G~vG~~la~~L~~~g~~V~vid~~~~~~~~~~~~~~~~~~~~i~gd~~~~~~l~~a~i~~ad~vi~~~~~d   82 (153)
T 1id1_A            3 KDHFIVCGHSILAINTILQLNQRGQNVTVISNLPEDDIKQLEQRLGDNADVIPGDSNDSSVLKKAGIDRCRAILALSDND   82 (153)
T ss_dssp             CSCEEEECCSHHHHHHHHHHHHTTCCEEEEECCCHHHHHHHHHHHCTTCEEEESCTTSHHHHHHHTTTTCSEEEECSSCH
T ss_pred             CCcEEEECCCHHHHHHHHHHHHCCCCEEEEECCChHHHHHHHHhhcCCCeEEEcCCCCHHHHHHcChhhCCEEEEecCCh
Confidence            4569999999999999999999999999999974 4444443333  443322 44556666655 46899999999876


Q ss_pred             ccHHH-H---HhccccCCEEEEe
Q 018067          259 HPLMP-L---IGLLKSQGKLVLV  277 (361)
Q Consensus       259 ~~~~~-~---~~~l~~~G~~v~~  277 (361)
                      . .+. .   .+.+.+..+++..
T Consensus        83 ~-~n~~~~~~a~~~~~~~~ii~~  104 (153)
T 1id1_A           83 A-DNAFVVLSAKDMSSDVKTVLA  104 (153)
T ss_dssp             H-HHHHHHHHHHHHTSSSCEEEE
T ss_pred             H-HHHHHHHHHHHHCCCCEEEEE
Confidence            5 332 2   2233344566654

>3ruf_A WBGU; rossmann fold, UDP-hexose 4-epimerase, isomerase; HET: NAD UDP; 2.00A {Plesiomonas shigelloides} SCOP: c.2.1.2 PDB: 3ru9_A* 3rud_A* 3rue_A* 3rua_A* 3ruh_A* 3ruc_A* 3ru7_A* 3lu1_A*

Probab=96.95  E-value=0.0053  Score=55.80  Aligned_cols=75  Identities=11%  Similarity=0.036  Sum_probs=55.3

Q ss_pred             CCCEEEEEcC-ChHHHHHHHHHHHcCCeEEEEeCCchhHHHHHH---H-------cCCC-EEecCCCHHHHHHhcCCccE
Q 018067          183 PGMHVGVVGL-GGLGHVAVKFAKAMGVKVTVISTSPSKKSEAIE---R-------LGAD-SFLVSRDQDEMQAAMGTMDG  250 (361)
Q Consensus       183 ~g~~vlV~Ga-g~vG~~a~~la~~~g~~vi~~~~~~~~~~~~~~---~-------~g~~-~vv~~~~~~~~~~~~~g~d~  250 (361)
                      .+.+|||+|+ |.+|...++.+...|.+|+++++.........+   .       -+.. ...|..+.+.+.++..++|+
T Consensus        24 ~~~~vlVtGatG~iG~~l~~~L~~~g~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~~~~~Dl~d~~~~~~~~~~~d~  103 (351)
T 3ruf_A           24 SPKTWLITGVAGFIGSNLLEKLLKLNQVVIGLDNFSTGHQYNLDEVKTLVSTEQWSRFCFIEGDIRDLTTCEQVMKGVDH  103 (351)
T ss_dssp             SCCEEEEETTTSHHHHHHHHHHHHTTCEEEEEECCSSCCHHHHHHHHHTSCHHHHTTEEEEECCTTCHHHHHHHTTTCSE
T ss_pred             CCCeEEEECCCcHHHHHHHHHHHHCCCEEEEEeCCCCCchhhhhhhhhccccccCCceEEEEccCCCHHHHHHHhcCCCE
Confidence            4678999998 999999999999999999999986543222111   1       1222 22355677777777789999


Q ss_pred             EEEcCCC
Q 018067          251 IIDTVSA  257 (361)
Q Consensus       251 vid~~g~  257 (361)
                      ||++++.
T Consensus       104 Vih~A~~  110 (351)
T 3ruf_A          104 VLHQAAL  110 (351)
T ss_dssp             EEECCCC
T ss_pred             EEECCcc
Confidence            9999985

>3d7l_A LIN1944 protein; APC89317, structural genomics, PS protein structure initiative, midwest center for structural genomics, MCSG; 2.06A {Listeria innocua}

Probab=96.94  E-value=0.0021  Score=53.58  Aligned_cols=60  Identities=17%  Similarity=0.297  Sum_probs=45.6

Q ss_pred             EEEEEcC-ChHHHHHHHHHHHcCCeEEEEeCCchhHHHHHHHcCCCEEecCCCHHHHHHhc---CCccEEEEcCCC
Q 018067          186 HVGVVGL-GGLGHVAVKFAKAMGVKVTVISTSPSKKSEAIERLGADSFLVSRDQDEMQAAM---GTMDGIIDTVSA  257 (361)
Q Consensus       186 ~vlV~Ga-g~vG~~a~~la~~~g~~vi~~~~~~~~~~~~~~~~g~~~vv~~~~~~~~~~~~---~g~d~vid~~g~  257 (361)
                      ++||.|+ |.+|..+++.+. .|++|++++++.+           ....|..+++.+.++.   +++|++|+++|.
T Consensus         5 ~vlVtGasg~iG~~~~~~l~-~g~~V~~~~r~~~-----------~~~~D~~~~~~~~~~~~~~~~~d~vi~~ag~   68 (202)
T 3d7l_A            5 KILLIGASGTLGSAVKERLE-KKAEVITAGRHSG-----------DVTVDITNIDSIKKMYEQVGKVDAIVSATGS   68 (202)
T ss_dssp             EEEEETTTSHHHHHHHHHHT-TTSEEEEEESSSS-----------SEECCTTCHHHHHHHHHHHCCEEEEEECCCC
T ss_pred             EEEEEcCCcHHHHHHHHHHH-CCCeEEEEecCcc-----------ceeeecCCHHHHHHHHHHhCCCCEEEECCCC
Confidence            7999998 999999999988 8999999988754           1224555655444432   468999999983

>3jtm_A Formate dehydrogenase, mitochondrial; mitochondrion, NAD, oxidoreductase, T peptide; 1.30A {Arabidopsis thaliana} PDB: 3n7u_A* 3naq_A

Probab=96.94  E-value=0.0027  Score=58.00  Aligned_cols=91  Identities=20%  Similarity=0.238  Sum_probs=68.1

Q ss_pred             CCCCEEEEEcCChHHHHHHHHHHHcCCeEEEEeCCchhHHHHHHHcCCCEEecCCCHHHHHHhcCCccEEEEcCCCc---
Q 018067          182 KPGMHVGVVGLGGLGHVAVKFAKAMGVKVTVISTSPSKKSEAIERLGADSFLVSRDQDEMQAAMGTMDGIIDTVSAV---  258 (361)
Q Consensus       182 ~~g~~vlV~Gag~vG~~a~~la~~~g~~vi~~~~~~~~~~~~~~~~g~~~vv~~~~~~~~~~~~~g~d~vid~~g~~---  258 (361)
                      -.|++|.|+|.|.+|..+++.++.+|++|++.+++....... ++.|+..+      +.+.++....|+|+-++...   
T Consensus       162 l~gktvGIIG~G~IG~~vA~~l~~~G~~V~~~dr~~~~~~~~-~~~g~~~~------~~l~ell~~aDvV~l~~Plt~~t  234 (351)
T 3jtm_A          162 LEGKTIGTVGAGRIGKLLLQRLKPFGCNLLYHDRLQMAPELE-KETGAKFV------EDLNEMLPKCDVIVINMPLTEKT  234 (351)
T ss_dssp             STTCEEEEECCSHHHHHHHHHHGGGCCEEEEECSSCCCHHHH-HHHCCEEC------SCHHHHGGGCSEEEECSCCCTTT
T ss_pred             ccCCEEeEEEeCHHHHHHHHHHHHCCCEEEEeCCCccCHHHH-HhCCCeEc------CCHHHHHhcCCEEEECCCCCHHH
Confidence            468999999999999999999999999999998876444333 55676432      12344556789999887742   


Q ss_pred             --ccHHHHHhccccCCEEEEecC
Q 018067          259 --HPLMPLIGLLKSQGKLVLVGA  279 (361)
Q Consensus       259 --~~~~~~~~~l~~~G~~v~~g~  279 (361)
                        ..-...+..|+++..+|.++.
T Consensus       235 ~~li~~~~l~~mk~gailIN~aR  257 (351)
T 3jtm_A          235 RGMFNKELIGKLKKGVLIVNNAR  257 (351)
T ss_dssp             TTCBSHHHHHHSCTTEEEEECSC
T ss_pred             HHhhcHHHHhcCCCCCEEEECcC
Confidence              112567788999999999875

>3o8q_A Shikimate 5-dehydrogenase I alpha; structural genomics, center for structural genomics of infec diseases, csgid; HET: EPE; 1.45A {Vibrio cholerae biovar el tor} PDB: 3sef_A* 3pgj_A* 3o8q_B*

Probab=96.94  E-value=0.0028  Score=56.03  Aligned_cols=101  Identities=17%  Similarity=0.019  Sum_probs=68.4

Q ss_pred             HhhhcCCCCCCCEEEEEcCChHHHHHHHHHHHcCC-eEEEEeCCchhHHHHHHHcCC---CEEecCCCHHHHHHhcCCcc
Q 018067          174 PLRFYGLDKPGMHVGVVGLGGLGHVAVKFAKAMGV-KVTVISTSPSKKSEAIERLGA---DSFLVSRDQDEMQAAMGTMD  249 (361)
Q Consensus       174 ~l~~~~~~~~g~~vlV~Gag~vG~~a~~la~~~g~-~vi~~~~~~~~~~~~~~~~g~---~~vv~~~~~~~~~~~~~g~d  249 (361)
                      +|.....--.+++++|+|+|++|.+++..+...|+ +|+++.++.++.+.++++++.   ...+...      ++..++|
T Consensus       116 ~L~~~~~~l~~k~vlvlGaGg~g~aia~~L~~~G~~~v~v~~R~~~~a~~la~~~~~~~~~~~~~~~------~l~~~aD  189 (281)
T 3o8q_A          116 DLLAQQVLLKGATILLIGAGGAARGVLKPLLDQQPASITVTNRTFAKAEQLAELVAAYGEVKAQAFE------QLKQSYD  189 (281)
T ss_dssp             HHHHTTCCCTTCEEEEECCSHHHHHHHHHHHTTCCSEEEEEESSHHHHHHHHHHHGGGSCEEEEEGG------GCCSCEE
T ss_pred             HHHHhCCCccCCEEEEECchHHHHHHHHHHHhcCCCeEEEEECCHHHHHHHHHHhhccCCeeEeeHH------HhcCCCC
Confidence            34443322468899999999999999999999997 999999999888888777763   1222221      1225799


Q ss_pred             EEEEcCCCcccHH---HHHhccccCCEEEEecCC
Q 018067          250 GIIDTVSAVHPLM---PLIGLLKSQGKLVLVGAP  280 (361)
Q Consensus       250 ~vid~~g~~~~~~---~~~~~l~~~G~~v~~g~~  280 (361)
                      +||++++....-.   .-.+.++++..++++...
T Consensus       190 iIInaTp~gm~~~~~~l~~~~l~~~~~V~DlvY~  223 (281)
T 3o8q_A          190 VIINSTSASLDGELPAIDPVIFSSRSVCYDMMYG  223 (281)
T ss_dssp             EEEECSCCCC----CSCCGGGEEEEEEEEESCCC
T ss_pred             EEEEcCcCCCCCCCCCCCHHHhCcCCEEEEecCC
Confidence            9999987643111   013456666666776543

>3cea_A MYO-inositol 2-dehydrogenase; NP_786804.1, oxidoreductase FA NAD-binding rossmann fold, structural genomics; HET: NAD; 2.40A {Lactobacillus plantarum WCFS1}

Probab=96.94  E-value=0.014  Score=53.11  Aligned_cols=132  Identities=17%  Similarity=0.185  Sum_probs=82.6

Q ss_pred             CEEEEEcCChHHHHHHHHHH-Hc-CCeEEEE-eCCchhHHHHHHHcCCCEEecCCCHHHHHHhc-CCccEEEEcCCCccc
Q 018067          185 MHVGVVGLGGLGHVAVKFAK-AM-GVKVTVI-STSPSKKSEAIERLGADSFLVSRDQDEMQAAM-GTMDGIIDTVSAVHP  260 (361)
Q Consensus       185 ~~vlV~Gag~vG~~a~~la~-~~-g~~vi~~-~~~~~~~~~~~~~~g~~~vv~~~~~~~~~~~~-~g~d~vid~~g~~~~  260 (361)
                      -+|.|+|+|.+|...++.++ .. +++++.+ ++++++.+.+++++|+..+++  +.+.  -+. .++|+|+.++....-
T Consensus         9 ~~v~iiG~G~ig~~~~~~l~~~~~~~~~vav~d~~~~~~~~~a~~~g~~~~~~--~~~~--~l~~~~~D~V~i~tp~~~h   84 (346)
T 3cea_A            9 LRAAIIGLGRLGERHARHLVNKIQGVKLVAACALDSNQLEWAKNELGVETTYT--NYKD--MIDTENIDAIFIVAPTPFH   84 (346)
T ss_dssp             EEEEEECCSTTHHHHHHHHHHTCSSEEEEEEECSCHHHHHHHHHTTCCSEEES--CHHH--HHTTSCCSEEEECSCGGGH
T ss_pred             ceEEEEcCCHHHHHHHHHHHhcCCCcEEEEEecCCHHHHHHHHHHhCCCcccC--CHHH--HhcCCCCCEEEEeCChHhH
Confidence            47899999999998888877 43 6776554 556666667777788754432  3221  122 379999999988654


Q ss_pred             HHHHHhccccCCEEEEecCCCCCcccChHH---H---H-hC-CcEEE-ecccCCHHHHHHHHHHHHcCCCcee
Q 018067          261 LMPLIGLLKSQGKLVLVGAPEKPLELPAFS---L---L-MG-RKIVG-GSMIGGMKETQEMIDFAAKHNIRAD  324 (361)
Q Consensus       261 ~~~~~~~l~~~G~~v~~g~~~~~~~~~~~~---~---~-~~-~~~i~-g~~~~~~~~~~~~~~ll~~~~~~~~  324 (361)
                      ...+..+++.| +-+.+..   +...+..+   +   . .+ ++.+. +........++.+.+++.+|.+-..
T Consensus        85 ~~~~~~al~~G-~~v~~eK---p~~~~~~~~~~l~~~a~~~~~~~~~~~~~~r~~p~~~~~~~~i~~g~iG~i  153 (346)
T 3cea_A           85 PEMTIYAMNAG-LNVFCEK---PLGLDFNEVDEMAKVIKSHPNQIFQSGFMRRYDDSYRYAKKIVDNGDIGKI  153 (346)
T ss_dssp             HHHHHHHHHTT-CEEEECS---CCCSCHHHHHHHHHHHHTCTTSCEECCCGGGTCHHHHHHHHHHHTTTTCSE
T ss_pred             HHHHHHHHHCC-CEEEEcC---CCCCCHHHHHHHHHHHHhCCCCeEEEecccccCHHHHHHHHHHHcCCCCCe
Confidence            67777777765 5555532   22233221   2   1 23 44443 3333333458888889998877533

>2d5c_A AROE, shikimate 5-dehydrogenase; substrate, dimer, structural genomics, NPPSFA, Na project on protein structural and functional analyses; HET: SKM; 1.65A {Thermus thermophilus} PDB: 1wxd_A* 2cy0_A* 2ev9_A*

Probab=96.94  E-value=0.0023  Score=56.03  Aligned_cols=89  Identities=19%  Similarity=0.212  Sum_probs=66.2

Q ss_pred             CCCEEEEEcCChHHHHHHHHHHHcCCeEEEEeCCchhHHHHHHHcCCCEEecCCCHHHHHHhcCCccEEEEcCCCcccH-
Q 018067          183 PGMHVGVVGLGGLGHVAVKFAKAMGVKVTVISTSPSKKSEAIERLGADSFLVSRDQDEMQAAMGTMDGIIDTVSAVHPL-  261 (361)
Q Consensus       183 ~g~~vlV~Gag~vG~~a~~la~~~g~~vi~~~~~~~~~~~~~~~~g~~~vv~~~~~~~~~~~~~g~d~vid~~g~~~~~-  261 (361)
                      .| +++|+|+|.+|.+++..+...|++|++.+++.++.+.+++++|..  ++  +   ..+. ..+|+|+.+++..... 
T Consensus       116 ~~-~v~iiG~G~~g~~~a~~l~~~g~~v~v~~r~~~~~~~l~~~~~~~--~~--~---~~~~-~~~Divi~~tp~~~~~~  186 (263)
T 2d5c_A          116 KG-PALVLGAGGAGRAVAFALREAGLEVWVWNRTPQRALALAEEFGLR--AV--P---LEKA-REARLLVNATRVGLEDP  186 (263)
T ss_dssp             CS-CEEEECCSHHHHHHHHHHHHTTCCEEEECSSHHHHHHHHHHHTCE--EC--C---GGGG-GGCSEEEECSSTTTTCT
T ss_pred             CC-eEEEECCcHHHHHHHHHHHHCCCEEEEEECCHHHHHHHHHHhccc--hh--h---Hhhc-cCCCEEEEccCCCCCCC
Confidence            56 899999999999999999999999999999888777787777764  21  2   1234 5799999999875310 


Q ss_pred             --H-HHHhccccCCEEEEecCC
Q 018067          262 --M-PLIGLLKSQGKLVLVGAP  280 (361)
Q Consensus       262 --~-~~~~~l~~~G~~v~~g~~  280 (361)
                        . .....++++..++.++..
T Consensus       187 ~~~~l~~~~l~~g~~viD~~~~  208 (263)
T 2d5c_A          187 SASPLPAELFPEEGAAVDLVYR  208 (263)
T ss_dssp             TCCSSCGGGSCSSSEEEESCCS
T ss_pred             CCCCCCHHHcCCCCEEEEeecC
Confidence              0 014567777788887653

>3ctm_A Carbonyl reductase; alcohol dehydrogenase, short-chain dehydrogenases/reductases (SDR), X-RAY crystallography, oxidoreductase; 2.69A {Candida parapsilosis}

Probab=96.93  E-value=0.0043  Score=54.58  Aligned_cols=75  Identities=21%  Similarity=0.319  Sum_probs=52.7

Q ss_pred             CCCEEEEEcC-ChHHHHHHHHHHHcCCeEEEEeCCchhHHHHHH---HcCCCE---EecCCCHHHHHHh-------cCCc
Q 018067          183 PGMHVGVVGL-GGLGHVAVKFAKAMGVKVTVISTSPSKKSEAIE---RLGADS---FLVSRDQDEMQAA-------MGTM  248 (361)
Q Consensus       183 ~g~~vlV~Ga-g~vG~~a~~la~~~g~~vi~~~~~~~~~~~~~~---~~g~~~---vv~~~~~~~~~~~-------~~g~  248 (361)
                      .++++||.|+ |.+|..++..+...|++|++++++.++...+.+   ..+...   ..|..+.+.+.++       .+.+
T Consensus        33 ~~k~vlITGasggIG~~la~~L~~~G~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~Dl~~~~~~~~~~~~~~~~~g~i  112 (279)
T 3ctm_A           33 KGKVASVTGSSGGIGWAVAEAYAQAGADVAIWYNSHPADEKAEHLQKTYGVHSKAYKCNISDPKSVEETISQQEKDFGTI  112 (279)
T ss_dssp             TTCEEEETTTTSSHHHHHHHHHHHHTCEEEEEESSSCCHHHHHHHHHHHCSCEEEEECCTTCHHHHHHHHHHHHHHHSCC
T ss_pred             CCCEEEEECCCcHHHHHHHHHHHHCCCEEEEEeCCHHHHHHHHHHHHhcCCcceEEEeecCCHHHHHHHHHHHHHHhCCC
Confidence            4688999987 999999999988889999999988765444432   234331   2355555444332       2469


Q ss_pred             cEEEEcCCC
Q 018067          249 DGIIDTVSA  257 (361)
Q Consensus       249 d~vid~~g~  257 (361)
                      |++|+++|.
T Consensus       113 d~li~~Ag~  121 (279)
T 3ctm_A          113 DVFVANAGV  121 (279)
T ss_dssp             SEEEECGGG
T ss_pred             CEEEECCcc
Confidence            999999873

>1xq6_A Unknown protein; structural genomics, protein structure initiative, CESG, AT5G02240, NADP, center for eukaryotic structural genomics; HET: NAP; 1.80A {Arabidopsis thaliana} SCOP: c.2.1.2 PDB: 1ybm_A* 2q46_A* 2q4b_A*

Probab=96.91  E-value=0.0047  Score=53.12  Aligned_cols=73  Identities=23%  Similarity=0.153  Sum_probs=55.4

Q ss_pred             CCCEEEEEcC-ChHHHHHHHHHHHc--CCeEEEEeCCchhHHHHHHHcCCCE-EecCCCHHHHHHhcCCccEEEEcCCC
Q 018067          183 PGMHVGVVGL-GGLGHVAVKFAKAM--GVKVTVISTSPSKKSEAIERLGADS-FLVSRDQDEMQAAMGTMDGIIDTVSA  257 (361)
Q Consensus       183 ~g~~vlV~Ga-g~vG~~a~~la~~~--g~~vi~~~~~~~~~~~~~~~~g~~~-vv~~~~~~~~~~~~~g~d~vid~~g~  257 (361)
                      .+.+|||+|+ |.+|...++.+...  |.+|++++++.++...+  ..+... ..|..+.+.+.++..++|+||+++|.
T Consensus         3 ~~~~ilVtGasG~iG~~l~~~l~~~~~g~~V~~~~r~~~~~~~~--~~~~~~~~~D~~d~~~~~~~~~~~d~vi~~a~~   79 (253)
T 1xq6_A            3 NLPTVLVTGASGRTGQIVYKKLKEGSDKFVAKGLVRSAQGKEKI--GGEADVFIGDITDADSINPAFQGIDALVILTSA   79 (253)
T ss_dssp             SCCEEEEESTTSHHHHHHHHHHHHTTTTCEEEEEESCHHHHHHT--TCCTTEEECCTTSHHHHHHHHTTCSEEEECCCC
T ss_pred             CCCEEEEEcCCcHHHHHHHHHHHhcCCCcEEEEEEcCCCchhhc--CCCeeEEEecCCCHHHHHHHHcCCCEEEEeccc
Confidence            4678999997 99999999999888  89999999987654332  112332 33566777777777889999999874

>2fwm_X 2,3-dihydro-2,3-dihydroxybenzoate dehydrogenase; enterobactin, rossman fold, chorismate metabolism, short-CHA oxidoreductase, tetramer; 2.00A {Escherichia coli}

Probab=96.90  E-value=0.0045  Score=53.59  Aligned_cols=70  Identities=19%  Similarity=0.265  Sum_probs=51.3

Q ss_pred             CCCEEEEEcC-ChHHHHHHHHHHHcCCeEEEEeCCchhHHHHHHHcCCC-EEecCCCHHHHHHh-------cCCccEEEE
Q 018067          183 PGMHVGVVGL-GGLGHVAVKFAKAMGVKVTVISTSPSKKSEAIERLGAD-SFLVSRDQDEMQAA-------MGTMDGIID  253 (361)
Q Consensus       183 ~g~~vlV~Ga-g~vG~~a~~la~~~g~~vi~~~~~~~~~~~~~~~~g~~-~vv~~~~~~~~~~~-------~~g~d~vid  253 (361)
                      .++++||.|+ |++|.+++..+...|++|++++++.+.     +..+.. ...|..+++.+.++       .+++|++|+
T Consensus         6 ~~k~vlVTGas~giG~~ia~~l~~~G~~V~~~~r~~~~-----~~~~~~~~~~D~~d~~~~~~~~~~~~~~~g~id~lv~   80 (250)
T 2fwm_X            6 SGKNVWVTGAGKGIGYATALAFVEAGAKVTGFDQAFTQ-----EQYPFATEVMDVADAAQVAQVCQRLLAETERLDALVN   80 (250)
T ss_dssp             TTCEEEEESTTSHHHHHHHHHHHHTTCEEEEEESCCCS-----SCCSSEEEECCTTCHHHHHHHHHHHHHHCSCCCEEEE
T ss_pred             CCCEEEEeCCCcHHHHHHHHHHHHCCCEEEEEeCchhh-----hcCCceEEEcCCCCHHHHHHHHHHHHHHcCCCCEEEE
Confidence            4688999997 999999999999999999999987652     123432 12355665544433       247999999


Q ss_pred             cCCC
Q 018067          254 TVSA  257 (361)
Q Consensus       254 ~~g~  257 (361)
                      ++|.
T Consensus        81 ~Ag~   84 (250)
T 2fwm_X           81 AAGI   84 (250)
T ss_dssp             CCCC
T ss_pred             CCCc
Confidence            9985

>3lyl_A 3-oxoacyl-(acyl-carrier-protein) reductase; alpha and beta protein, NAD(P)-binding rossmann fold, csgid, oxidoreductase; 1.95A {Francisella tularensis subsp} SCOP: c.2.1.2

Probab=96.89  E-value=0.0046  Score=53.30  Aligned_cols=75  Identities=17%  Similarity=0.183  Sum_probs=55.2

Q ss_pred             CCCEEEEEcC-ChHHHHHHHHHHHcCCeEEEEeCCchhHHHHHHHc---CCCE---EecCCCHHHHHHh-------cCCc
Q 018067          183 PGMHVGVVGL-GGLGHVAVKFAKAMGVKVTVISTSPSKKSEAIERL---GADS---FLVSRDQDEMQAA-------MGTM  248 (361)
Q Consensus       183 ~g~~vlV~Ga-g~vG~~a~~la~~~g~~vi~~~~~~~~~~~~~~~~---g~~~---vv~~~~~~~~~~~-------~~g~  248 (361)
                      .++++||.|+ |++|...++.+...|++|++++++.++...+.+.+   +...   ..|..+++.++++       .+++
T Consensus         4 ~~k~vlITGas~gIG~~~a~~l~~~G~~v~~~~r~~~~~~~~~~~~~~~~~~~~~~~~D~~~~~~~~~~~~~~~~~~~~i   83 (247)
T 3lyl_A            4 NEKVALVTGASRGIGFEVAHALASKGATVVGTATSQASAEKFENSMKEKGFKARGLVLNISDIESIQNFFAEIKAENLAI   83 (247)
T ss_dssp             TTCEEEESSCSSHHHHHHHHHHHHTTCEEEEEESSHHHHHHHHHHHHHTTCCEEEEECCTTCHHHHHHHHHHHHHTTCCC
T ss_pred             CCCEEEEECCCChHHHHHHHHHHHCCCEEEEEeCCHHHHHHHHHHHHhcCCceEEEEecCCCHHHHHHHHHHHHHHcCCC
Confidence            4678999987 99999999999999999999999987766554433   4332   2355555443332       2479


Q ss_pred             cEEEEcCCC
Q 018067          249 DGIIDTVSA  257 (361)
Q Consensus       249 d~vid~~g~  257 (361)
                      |++|+++|.
T Consensus        84 d~li~~Ag~   92 (247)
T 3lyl_A           84 DILVNNAGI   92 (247)
T ss_dssp             SEEEECCCC
T ss_pred             CEEEECCCC
Confidence            999999985

>1zmt_A Haloalcohol dehalogenase HHEC; halohydrin dehalogenase, epoxide catalysis, enantioselectivity, lyase; HET: RNO; 1.70A {Agrobacterium tumefaciens} SCOP: c.2.1.2 PDB: 1pwz_A 1px0_A* 1pwx_A* 1zo8_A*

Probab=96.89  E-value=0.0025  Score=55.40  Aligned_cols=74  Identities=15%  Similarity=0.042  Sum_probs=50.5

Q ss_pred             CEEEEEcC-ChHHHHHHHHHHHcCCeEEEEeCCchhHHHHHH--HcCCC-EEecCCCHH-HHHH---hcCCccEEEEcCC
Q 018067          185 MHVGVVGL-GGLGHVAVKFAKAMGVKVTVISTSPSKKSEAIE--RLGAD-SFLVSRDQD-EMQA---AMGTMDGIIDTVS  256 (361)
Q Consensus       185 ~~vlV~Ga-g~vG~~a~~la~~~g~~vi~~~~~~~~~~~~~~--~~g~~-~vv~~~~~~-~~~~---~~~g~d~vid~~g  256 (361)
                      +++||.|+ |++|..+++.+...|++|++++++.++...+.+  ..+.+ ..++..+.+ .+.+   ..+++|++|+++|
T Consensus         2 k~vlVTGas~gIG~~ia~~l~~~G~~V~~~~r~~~~~~~~~~l~~~~~~~~~~d~~~v~~~~~~~~~~~g~iD~lv~nAg   81 (254)
T 1zmt_A            2 STAIVTNVKHFGGMGSALRLSEAGHTVACHDESFKQKDELEAFAETYPQLKPMSEQEPAELIEAVTSAYGQVDVLVSNDI   81 (254)
T ss_dssp             CEEEESSTTSTTHHHHHHHHHHTTCEEEECCGGGGSHHHHHHHHHHCTTSEECCCCSHHHHHHHHHHHHSCCCEEEEECC
T ss_pred             eEEEEeCCCchHHHHHHHHHHHCCCEEEEEeCCHHHHHHHHHHHhcCCcEEEECHHHHHHHHHHHHHHhCCCCEEEECCC
Confidence            36889987 999999999999999999999988766544422  22433 222333322 2222   2358999999998


Q ss_pred             Cc
Q 018067          257 AV  258 (361)
Q Consensus       257 ~~  258 (361)
                      ..
T Consensus        82 ~~   83 (254)
T 1zmt_A           82 FA   83 (254)
T ss_dssp             CC
T ss_pred             cC
Confidence            53

>2pbf_A Protein-L-isoaspartate O-methyltransferase beta-A methyltransferase; protein repair, isoaspartyl formation, P. falciparum; HET: SAH; 2.00A {Plasmodium falciparum}

Probab=96.88  E-value=0.0037  Score=53.14  Aligned_cols=99  Identities=23%  Similarity=0.213  Sum_probs=68.0

Q ss_pred             CCCCCCEEEEEcCChHHHHHHHHHHHcC------CeEEEEeCCchhHHHHHHH---cC-----C-C-EEecCCCHHHHH-
Q 018067          180 LDKPGMHVGVVGLGGLGHVAVKFAKAMG------VKVTVISTSPSKKSEAIER---LG-----A-D-SFLVSRDQDEMQ-  242 (361)
Q Consensus       180 ~~~~g~~vlV~Gag~vG~~a~~la~~~g------~~vi~~~~~~~~~~~~~~~---~g-----~-~-~vv~~~~~~~~~-  242 (361)
                      .++++++||-+|+|. |..++.+++..+      .+|+.++.+++....+.+.   .+     . . .++..+-.+... 
T Consensus        77 ~~~~~~~VLdiG~G~-G~~~~~la~~~~~~~~~~~~v~~vD~~~~~~~~a~~~~~~~~~~~~~~~~v~~~~~d~~~~~~~  155 (227)
T 2pbf_A           77 VLKPGSRAIDVGSGS-GYLTVCMAIKMNVLENKNSYVIGLERVKDLVNFSLENIKRDKPELLKIDNFKIIHKNIYQVNEE  155 (227)
T ss_dssp             TSCTTCEEEEESCTT-SHHHHHHHHHTTTTTCTTCEEEEEESCHHHHHHHHHHHHHHCGGGGSSTTEEEEECCGGGCCHH
T ss_pred             hCCCCCEEEEECCCC-CHHHHHHHHHhcccCCCCCEEEEEeCCHHHHHHHHHHHHHcCccccccCCEEEEECChHhcccc
Confidence            468899999999976 888889998876      5999999887765444332   23     1 1 222211111110 


Q ss_pred             --HhcCCccEEEEcCCCcccHHHHHhccccCCEEEEecC
Q 018067          243 --AAMGTMDGIIDTVSAVHPLMPLIGLLKSQGKLVLVGA  279 (361)
Q Consensus       243 --~~~~g~d~vid~~g~~~~~~~~~~~l~~~G~~v~~g~  279 (361)
                        ...+.+|+|+........+..+.+.|+++|+++..-.
T Consensus       156 ~~~~~~~fD~I~~~~~~~~~~~~~~~~LkpgG~lv~~~~  194 (227)
T 2pbf_A          156 EKKELGLFDAIHVGASASELPEILVDLLAENGKLIIPIE  194 (227)
T ss_dssp             HHHHHCCEEEEEECSBBSSCCHHHHHHEEEEEEEEEEEE
T ss_pred             cCccCCCcCEEEECCchHHHHHHHHHhcCCCcEEEEEEc
Confidence              1235799999887776768899999999999887643

>2g76_A 3-PGDH, D-3-phosphoglycerate dehydrogenase; oxidoreductase, phosphoglycerate dehydrogenase deficiency, S metabolism, 2-hydroxyacid dehydrogenases; HET: NAD; 1.70A {Homo sapiens}

Probab=96.88  E-value=0.0048  Score=55.96  Aligned_cols=89  Identities=17%  Similarity=0.178  Sum_probs=68.5

Q ss_pred             CCCCEEEEEcCChHHHHHHHHHHHcCCeEEEEeCCchhHHHHHHHcCCCEEecCCCHHHHHHhcCCccEEEEcCCCcc--
Q 018067          182 KPGMHVGVVGLGGLGHVAVKFAKAMGVKVTVISTSPSKKSEAIERLGADSFLVSRDQDEMQAAMGTMDGIIDTVSAVH--  259 (361)
Q Consensus       182 ~~g~~vlV~Gag~vG~~a~~la~~~g~~vi~~~~~~~~~~~~~~~~g~~~vv~~~~~~~~~~~~~g~d~vid~~g~~~--  259 (361)
                      -.|++|.|+|.|.+|...++.++.+|++|++.++..++ . ....+|+..    .+   +.++....|+|+.++....  
T Consensus       163 l~g~tvgIIGlG~IG~~vA~~l~~~G~~V~~~d~~~~~-~-~~~~~g~~~----~~---l~ell~~aDvV~l~~P~t~~t  233 (335)
T 2g76_A          163 LNGKTLGILGLGRIGREVATRMQSFGMKTIGYDPIISP-E-VSASFGVQQ----LP---LEEIWPLCDFITVHTPLLPST  233 (335)
T ss_dssp             CTTCEEEEECCSHHHHHHHHHHHTTTCEEEEECSSSCH-H-HHHHTTCEE----CC---HHHHGGGCSEEEECCCCCTTT
T ss_pred             CCcCEEEEEeECHHHHHHHHHHHHCCCEEEEECCCcch-h-hhhhcCcee----CC---HHHHHhcCCEEEEecCCCHHH
Confidence            46889999999999999999999999999999887654 2 335677642    12   3345557999999887542  


Q ss_pred             --cH-HHHHhccccCCEEEEecC
Q 018067          260 --PL-MPLIGLLKSQGKLVLVGA  279 (361)
Q Consensus       260 --~~-~~~~~~l~~~G~~v~~g~  279 (361)
                        .+ ...+..+++++.++.++.
T Consensus       234 ~~li~~~~l~~mk~gailIN~ar  256 (335)
T 2g76_A          234 TGLLNDNTFAQCKKGVRVVNCAR  256 (335)
T ss_dssp             TTSBCHHHHTTSCTTEEEEECSC
T ss_pred             HHhhCHHHHhhCCCCcEEEECCC
Confidence              12 467888999999999986

>2pd6_A Estradiol 17-beta-dehydrogenase 8; short-chain dehydrogenase/reductase, steroid metabolism, LIP metabolism, structural genomics; HET: NAD; 2.00A {Homo sapiens}

Probab=96.87  E-value=0.0029  Score=55.07  Aligned_cols=75  Identities=12%  Similarity=0.131  Sum_probs=53.8

Q ss_pred             CCCEEEEEcC-ChHHHHHHHHHHHcCCeEEEEeCCchhHHHHHHHcC------------CC-EEecCCCHHHHHHhc---
Q 018067          183 PGMHVGVVGL-GGLGHVAVKFAKAMGVKVTVISTSPSKKSEAIERLG------------AD-SFLVSRDQDEMQAAM---  245 (361)
Q Consensus       183 ~g~~vlV~Ga-g~vG~~a~~la~~~g~~vi~~~~~~~~~~~~~~~~g------------~~-~vv~~~~~~~~~~~~---  245 (361)
                      .++++||.|+ |.+|..++..+...|++|++++++.++...+.+++.            .. ...|..+.+.+.++.   
T Consensus         6 ~~k~vlITGasggiG~~la~~l~~~G~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~D~~~~~~~~~~~~~~   85 (264)
T 2pd6_A            6 RSALALVTGAGSGIGRAVSVRLAGEGATVAACDLDRAAAQETVRLLGGPGSKEGPPRGNHAAFQADVSEARAARCLLEQV   85 (264)
T ss_dssp             TTCEEEEETTTSHHHHHHHHHHHHTTCEEEEEESSHHHHHHHHHTC------------CCEEEECCTTSHHHHHHHHHHH
T ss_pred             CCCEEEEECCCChHHHHHHHHHHHCCCEEEEEeCChHHHHHHHHHHHhcCccccccCcceEEEEecCCCHHHHHHHHHHH
Confidence            4678999997 999999999999999999999998877666654432            11 123445554433322   


Q ss_pred             ----CCc-cEEEEcCCC
Q 018067          246 ----GTM-DGIIDTVSA  257 (361)
Q Consensus       246 ----~g~-d~vid~~g~  257 (361)
                          +++ |++|+++|.
T Consensus        86 ~~~~g~i~d~vi~~Ag~  102 (264)
T 2pd6_A           86 QACFSRPPSVVVSCAGI  102 (264)
T ss_dssp             HHHHSSCCSEEEECCCC
T ss_pred             HHHhCCCCeEEEECCCc
Confidence                356 999999984

>1y1p_A ARII, aldehyde reductase II; rossmann fold, short chain dehydrogenase reductase, oxidoreductase; HET: NMN AMP; 1.60A {Sporidiobolus salmonicolor} SCOP: c.2.1.2 PDB: 1ujm_A* 1zze_A

Probab=96.86  E-value=0.003  Score=57.10  Aligned_cols=76  Identities=21%  Similarity=0.138  Sum_probs=55.5

Q ss_pred             CCCCEEEEEcC-ChHHHHHHHHHHHcCCeEEEEeCCchhHHHHHHHc----C--CCEE--ecCCCHHHHHHhcCCccEEE
Q 018067          182 KPGMHVGVVGL-GGLGHVAVKFAKAMGVKVTVISTSPSKKSEAIERL----G--ADSF--LVSRDQDEMQAAMGTMDGII  252 (361)
Q Consensus       182 ~~g~~vlV~Ga-g~vG~~a~~la~~~g~~vi~~~~~~~~~~~~~~~~----g--~~~v--v~~~~~~~~~~~~~g~d~vi  252 (361)
                      .++.+|||.|+ |.+|..++..+...|.+|++++++.++...+.+.+    +  ...+  .|..+.+.+.++..++|+||
T Consensus         9 ~~~~~vlVTGatG~iG~~l~~~L~~~g~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~~D~~d~~~~~~~~~~~d~vi   88 (342)
T 1y1p_A            9 PEGSLVLVTGANGFVASHVVEQLLEHGYKVRGTARSASKLANLQKRWDAKYPGRFETAVVEDMLKQGAYDEVIKGAAGVA   88 (342)
T ss_dssp             CTTCEEEEETTTSHHHHHHHHHHHHTTCEEEEEESSHHHHHHHHHHHHHHSTTTEEEEECSCTTSTTTTTTTTTTCSEEE
T ss_pred             CCCCEEEEECCccHHHHHHHHHHHHCCCEEEEEeCCcccHHHHHHHhhccCCCceEEEEecCCcChHHHHHHHcCCCEEE
Confidence            46789999998 99999999999889999999999876654443321    2  2222  24455555555556899999


Q ss_pred             EcCCC
Q 018067          253 DTVSA  257 (361)
Q Consensus       253 d~~g~  257 (361)
                      ++++.
T Consensus        89 h~A~~   93 (342)
T 1y1p_A           89 HIASV   93 (342)
T ss_dssp             ECCCC
T ss_pred             EeCCC
Confidence            99975

>1jw9_B Molybdopterin biosynthesis MOEB protein; MOEB: modified rossmann fold, (2) Cys-X-X-Cys zinc-binding M MOAD: ubiquitin-like fold; 1.70A {Escherichia coli} SCOP: c.111.1.1 PDB: 1jwa_B* 1jwb_B*

Probab=96.86  E-value=0.002  Score=56.01  Aligned_cols=76  Identities=28%  Similarity=0.419  Sum_probs=52.4

Q ss_pred             CCEEEEEcCChHHHHHHHHHHHcCC-eEEEEeCCc-------------------hhHHHHHHHcC---C-CEE--ecC-C
Q 018067          184 GMHVGVVGLGGLGHVAVKFAKAMGV-KVTVISTSP-------------------SKKSEAIERLG---A-DSF--LVS-R  236 (361)
Q Consensus       184 g~~vlV~Gag~vG~~a~~la~~~g~-~vi~~~~~~-------------------~~~~~~~~~~g---~-~~v--v~~-~  236 (361)
                      +.+|+|+|+|++|..+++.+...|. ++++++...                   .+.+.+++.+.   . ..+  +.. -
T Consensus        31 ~~~VlVvG~Gg~G~~va~~La~~Gv~~i~lvD~d~v~~sNl~Rq~l~~~~diG~~Ka~~~~~~l~~~np~~~v~~~~~~~  110 (249)
T 1jw9_B           31 DSRVLIVGLGGLGCAASQYLASAGVGNLTLLDFDTVSLSNLQRQTLHSDATVGQPKVESARDALTRINPHIAITPVNALL  110 (249)
T ss_dssp             HCEEEEECCSHHHHHHHHHHHHHTCSEEEEECCCBCCGGGGGTCTTCCGGGTTSBHHHHHHHHHHHHCTTSEEEEECSCC
T ss_pred             CCeEEEEeeCHHHHHHHHHHHHcCCCeEEEEcCCCcccccCCcccccChhhcCcHHHHHHHHHHHHHCCCcEEEEEeccC
Confidence            5789999999999999999999998 787777765                   45444444332   1 121  111 1


Q ss_pred             CHHHHHHhcCCccEEEEcCCCcc
Q 018067          237 DQDEMQAAMGTMDGIIDTVSAVH  259 (361)
Q Consensus       237 ~~~~~~~~~~g~d~vid~~g~~~  259 (361)
                      +++.+.++..++|+||+++++..
T Consensus       111 ~~~~~~~~~~~~DvVi~~~d~~~  133 (249)
T 1jw9_B          111 DDAELAALIAEHDLVLDCTDNVA  133 (249)
T ss_dssp             CHHHHHHHHHTSSEEEECCSSHH
T ss_pred             CHhHHHHHHhCCCEEEEeCCCHH
Confidence            23444455568999999998865

>1xu9_A Corticosteroid 11-beta-dehydrogenase, isozyme 1; hydroxysteroid, SDR, oxidoreductase; HET: NDP CPS MES; 1.55A {Homo sapiens} SCOP: c.2.1.2 PDB: 1xu7_A* 3bzu_A* 3czr_A* 3d3e_A* 3d4n_A* 3fco_A* 3frj_A* 3h6k_A* 3hfg_A* 3oq1_A* 3qqp_A* 3pdj_A* 3d5q_A* 2rbe_A* 3byz_A* 3ey4_A* 3tfq_A* 3ch6_A* 2irw_A* 2ilt_A* ...

Probab=96.86  E-value=0.0041  Score=55.00  Aligned_cols=75  Identities=27%  Similarity=0.325  Sum_probs=53.5

Q ss_pred             CCCEEEEEcC-ChHHHHHHHHHHHcCCeEEEEeCCchhHHHHHHH---cCCCE----EecCCCHHHHHHh-------cCC
Q 018067          183 PGMHVGVVGL-GGLGHVAVKFAKAMGVKVTVISTSPSKKSEAIER---LGADS----FLVSRDQDEMQAA-------MGT  247 (361)
Q Consensus       183 ~g~~vlV~Ga-g~vG~~a~~la~~~g~~vi~~~~~~~~~~~~~~~---~g~~~----vv~~~~~~~~~~~-------~~g  247 (361)
                      .++++||.|+ |++|..+++.+...|++|++++++.++...+.++   .+...    ..|..+.+.+.++       .++
T Consensus        27 ~~k~vlITGasggIG~~la~~l~~~G~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~Dl~d~~~v~~~~~~~~~~~g~  106 (286)
T 1xu9_A           27 QGKKVIVTGASKGIGREMAYHLAKMGAHVVVTARSKETLQKVVSHCLELGAASAHYIAGTMEDMTFAEQFVAQAGKLMGG  106 (286)
T ss_dssp             TTCEEEESSCSSHHHHHHHHHHHHTTCEEEEEESCHHHHHHHHHHHHHHTCSEEEEEECCTTCHHHHHHHHHHHHHHHTS
T ss_pred             CCCEEEEeCCCcHHHHHHHHHHHHCCCEEEEEECCHHHHHHHHHHHHHhCCCceEEEeCCCCCHHHHHHHHHHHHHHcCC
Confidence            4678999998 9999999999999999999999998776655433   24311    2345555443332       248


Q ss_pred             ccEEEEc-CCC
Q 018067          248 MDGIIDT-VSA  257 (361)
Q Consensus       248 ~d~vid~-~g~  257 (361)
                      +|++|++ +|.
T Consensus       107 iD~li~naag~  117 (286)
T 1xu9_A          107 LDMLILNHITN  117 (286)
T ss_dssp             CSEEEECCCCC
T ss_pred             CCEEEECCccC
Confidence            9999998 453

>2ag5_A DHRS6, dehydrogenase/reductase (SDR family) member 6; protein-CO-factor complex, structural genomics, structural G consortium, SGC, oxidoreductase; HET: NAD; 1.84A {Homo sapiens} SCOP: c.2.1.2

Probab=96.86  E-value=0.0032  Score=54.34  Aligned_cols=74  Identities=16%  Similarity=0.192  Sum_probs=54.7

Q ss_pred             CCCEEEEEcC-ChHHHHHHHHHHHcCCeEEEEeCCchhHHHHHHHcC-CC-EEecCCCHHHHHHh---cCCccEEEEcCC
Q 018067          183 PGMHVGVVGL-GGLGHVAVKFAKAMGVKVTVISTSPSKKSEAIERLG-AD-SFLVSRDQDEMQAA---MGTMDGIIDTVS  256 (361)
Q Consensus       183 ~g~~vlV~Ga-g~vG~~a~~la~~~g~~vi~~~~~~~~~~~~~~~~g-~~-~vv~~~~~~~~~~~---~~g~d~vid~~g  256 (361)
                      .++++||.|+ |++|..+++.+...|++|++++++.++...+. ++. +. ...|..+++.+.++   .+++|++|+++|
T Consensus         5 ~~k~vlVTGas~gIG~~ia~~l~~~G~~V~~~~r~~~~~~~~~-~~~~~~~~~~D~~~~~~~~~~~~~~~~id~lv~~Ag   83 (246)
T 2ag5_A            5 DGKVIILTAAAQGIGQAAALAFAREGAKVIATDINESKLQELE-KYPGIQTRVLDVTKKKQIDQFANEVERLDVLFNVAG   83 (246)
T ss_dssp             TTCEEEESSTTSHHHHHHHHHHHHTTCEEEEEESCHHHHGGGG-GSTTEEEEECCTTCHHHHHHHHHHCSCCSEEEECCC
T ss_pred             CCCEEEEeCCCcHHHHHHHHHHHHCCCEEEEEECCHHHHHHHH-hccCceEEEeeCCCHHHHHHHHHHhCCCCEEEECCc
Confidence            4688999997 99999999999999999999999876655443 332 21 12355666555543   357999999998


Q ss_pred             C
Q 018067          257 A  257 (361)
Q Consensus       257 ~  257 (361)
                      .
T Consensus        84 ~   84 (246)
T 2ag5_A           84 F   84 (246)
T ss_dssp             C
T ss_pred             c
Confidence            4

>3icc_A Putative 3-oxoacyl-(acyl carrier protein) reducta; structural genomics, putative 3-oxoacyl-(acyl carrier protei reductase, oxidoreductase; HET: NAP MES; 1.87A {Bacillus anthracis str}

Probab=96.85  E-value=0.0027  Score=54.99  Aligned_cols=98  Identities=14%  Similarity=0.187  Sum_probs=62.9

Q ss_pred             CCCEEEEEcC-ChHHHHHHHHHHHcCCeEEEE-eCCchhHHHHHHH---cCCCE---EecCCCHHHHHHhc---------
Q 018067          183 PGMHVGVVGL-GGLGHVAVKFAKAMGVKVTVI-STSPSKKSEAIER---LGADS---FLVSRDQDEMQAAM---------  245 (361)
Q Consensus       183 ~g~~vlV~Ga-g~vG~~a~~la~~~g~~vi~~-~~~~~~~~~~~~~---~g~~~---vv~~~~~~~~~~~~---------  245 (361)
                      .++++||.|+ +++|.++++.+...|++|+++ .++.++.....++   .+...   ..|..+.+.+..+.         
T Consensus         6 ~~k~vlITGas~gIG~~~a~~l~~~G~~v~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~D~~~~~~~~~~~~~~~~~~~~   85 (255)
T 3icc_A            6 KGKVALVTGASRGIGRAIAKRLANDGALVAIHYGNRKEEAEETVYEIQSNGGSAFSIGANLESLHGVEALYSSLDNELQN   85 (255)
T ss_dssp             TTCEEEETTCSSHHHHHHHHHHHHTTCEEEEEESSCSHHHHHHHHHHHHTTCEEEEEECCTTSHHHHHHHHHHHHHHHHH
T ss_pred             CCCEEEEECCCChHHHHHHHHHHHCCCeEEEEeCCchHHHHHHHHHHHhcCCceEEEecCcCCHHHHHHHHHHHHHHhcc
Confidence            5788999987 999999999999999999886 4555544444333   23321   12444443322211         


Q ss_pred             ----CCccEEEEcCCCcc-------------------------cHHHHHhccccCCEEEEecCC
Q 018067          246 ----GTMDGIIDTVSAVH-------------------------PLMPLIGLLKSQGKLVLVGAP  280 (361)
Q Consensus       246 ----~g~d~vid~~g~~~-------------------------~~~~~~~~l~~~G~~v~~g~~  280 (361)
                          +.+|++|+++|...                         ..+.++..++++|+++.+++.
T Consensus        86 ~~~~~~id~lv~nAg~~~~~~~~~~~~~~~~~~~~~N~~g~~~l~~~~~~~~~~~~~iv~isS~  149 (255)
T 3icc_A           86 RTGSTKFDILINNAGIGPGAFIEETTEQFFDRMVSVNAKAPFFIIQQALSRLRDNSRIINISSA  149 (255)
T ss_dssp             HHSSSCEEEEEECCCCCCCBCGGGCCHHHHHHHHHHHTHHHHHHHHHHTTTEEEEEEEEEECCG
T ss_pred             cccCCcccEEEECCCCCCCCChhhCCHHHHHHHHhhhchHHHHHHHHHHHhhCCCCEEEEeCCh
Confidence                24999999998521                         122234455678999999864

>2j6i_A Formate dehydrogenase; oxidoreductase, D-specific-2- hydroxy acid dehydrogenase, cofactor regenerator, yeast, CBFDH; HET: PG4; 1.55A {Candida boidinii} PDB: 2fss_A

Probab=96.85  E-value=0.0025  Score=58.55  Aligned_cols=91  Identities=15%  Similarity=0.199  Sum_probs=67.4

Q ss_pred             CCCCEEEEEcCChHHHHHHHHHHHcCCe-EEEEeCCchhHHHHHHHcCCCEEecCCCHHHHHHhcCCccEEEEcCCCc--
Q 018067          182 KPGMHVGVVGLGGLGHVAVKFAKAMGVK-VTVISTSPSKKSEAIERLGADSFLVSRDQDEMQAAMGTMDGIIDTVSAV--  258 (361)
Q Consensus       182 ~~g~~vlV~Gag~vG~~a~~la~~~g~~-vi~~~~~~~~~~~~~~~~g~~~vv~~~~~~~~~~~~~g~d~vid~~g~~--  258 (361)
                      -.|.+|.|+|.|.+|...++.++.+|++ |++.+++....... +++|+..+   .+   +.++....|+|+.++...  
T Consensus       162 l~g~tvgIIG~G~IG~~vA~~l~~~G~~~V~~~d~~~~~~~~~-~~~g~~~~---~~---l~ell~~aDvV~l~~P~t~~  234 (364)
T 2j6i_A          162 IEGKTIATIGAGRIGYRVLERLVPFNPKELLYYDYQALPKDAE-EKVGARRV---EN---IEELVAQADIVTVNAPLHAG  234 (364)
T ss_dssp             STTCEEEEECCSHHHHHHHHHHGGGCCSEEEEECSSCCCHHHH-HHTTEEEC---SS---HHHHHHTCSEEEECCCCSTT
T ss_pred             CCCCEEEEECcCHHHHHHHHHHHhCCCcEEEEECCCccchhHH-HhcCcEec---CC---HHHHHhcCCEEEECCCCChH
Confidence            4789999999999999999999999997 99998776544433 56675421   12   233344789999988763  


Q ss_pred             --ccH-HHHHhccccCCEEEEecC
Q 018067          259 --HPL-MPLIGLLKSQGKLVLVGA  279 (361)
Q Consensus       259 --~~~-~~~~~~l~~~G~~v~~g~  279 (361)
                        ..+ ...+..+++++.+|.++.
T Consensus       235 t~~li~~~~l~~mk~ga~lIn~ar  258 (364)
T 2j6i_A          235 TKGLINKELLSKFKKGAWLVNTAR  258 (364)
T ss_dssp             TTTCBCHHHHTTSCTTEEEEECSC
T ss_pred             HHHHhCHHHHhhCCCCCEEEECCC
Confidence              222 356788999999999875

>1w6u_A 2,4-dienoyl-COA reductase, mitochondrial precursor; short chain dehydrogenase, beta- oxidation, NADP, oxidoreductase; HET: HXC NAP; 1.75A {Homo sapiens} SCOP: c.2.1.2 PDB: 1w73_A* 1w8d_A*

Probab=96.84  E-value=0.0039  Score=55.53  Aligned_cols=75  Identities=20%  Similarity=0.278  Sum_probs=55.0

Q ss_pred             CCCEEEEEcC-ChHHHHHHHHHHHcCCeEEEEeCCchhHHHHHHHc----CCCE---EecCCCHHHHHHh-------cCC
Q 018067          183 PGMHVGVVGL-GGLGHVAVKFAKAMGVKVTVISTSPSKKSEAIERL----GADS---FLVSRDQDEMQAA-------MGT  247 (361)
Q Consensus       183 ~g~~vlV~Ga-g~vG~~a~~la~~~g~~vi~~~~~~~~~~~~~~~~----g~~~---vv~~~~~~~~~~~-------~~g  247 (361)
                      .++++||.|+ |++|..++..+...|++|++++++.++...+.+++    +...   ..|..+.+.+..+       .+.
T Consensus        25 ~~k~vlITGasggiG~~la~~L~~~G~~V~~~~r~~~~~~~~~~~l~~~~~~~~~~~~~Dl~~~~~~~~~~~~~~~~~g~  104 (302)
T 1w6u_A           25 QGKVAFITGGGTGLGKGMTTLLSSLGAQCVIASRKMDVLKATAEQISSQTGNKVHAIQCDVRDPDMVQNTVSELIKVAGH  104 (302)
T ss_dssp             TTCEEEEETTTSHHHHHHHHHHHHTTCEEEEEESCHHHHHHHHHHHHHHHSSCEEEEECCTTCHHHHHHHHHHHHHHTCS
T ss_pred             CCCEEEEECCCchHHHHHHHHHHHCCCEEEEEeCCHHHHHHHHHHHHHhcCCceEEEEeCCCCHHHHHHHHHHHHHHcCC
Confidence            5688999998 99999999999999999999999887665554443    4332   2355555443332       247


Q ss_pred             ccEEEEcCCC
Q 018067          248 MDGIIDTVSA  257 (361)
Q Consensus       248 ~d~vid~~g~  257 (361)
                      +|++|+++|.
T Consensus       105 id~li~~Ag~  114 (302)
T 1w6u_A          105 PNIVINNAAG  114 (302)
T ss_dssp             CSEEEECCCC
T ss_pred             CCEEEECCCC
Confidence            8999999984

>1o5i_A 3-oxoacyl-(acyl carrier protein) reductase; TM1169, structur genomics, JCSG, PSI, protein structure initiative, joint CE structural genomics; HET: NAD; 2.50A {Thermotoga maritima} SCOP: c.2.1.2

Probab=96.84  E-value=0.0055  Score=53.04  Aligned_cols=72  Identities=17%  Similarity=0.179  Sum_probs=50.2

Q ss_pred             CCCCEEEEEcC-ChHHHHHHHHHHHcCCeEEEEeCCchhHHHHHHHcCCCEE-ecC-CCHHHHHHhcCCccEEEEcCCC
Q 018067          182 KPGMHVGVVGL-GGLGHVAVKFAKAMGVKVTVISTSPSKKSEAIERLGADSF-LVS-RDQDEMQAAMGTMDGIIDTVSA  257 (361)
Q Consensus       182 ~~g~~vlV~Ga-g~vG~~a~~la~~~g~~vi~~~~~~~~~~~~~~~~g~~~v-v~~-~~~~~~~~~~~g~d~vid~~g~  257 (361)
                      -.++++||.|+ |++|..+++.+...|++|++++++.+..    ++++.... .|. .+.+.+.+...++|++|+++|.
T Consensus        17 ~~~k~vlVTGas~gIG~~~a~~l~~~G~~V~~~~r~~~~~----~~~~~~~~~~D~~~~~~~~~~~~~~iD~lv~~Ag~   91 (249)
T 1o5i_A           17 IRDKGVLVLAASRGIGRAVADVLSQEGAEVTICARNEELL----KRSGHRYVVCDLRKDLDLLFEKVKEVDILVLNAGG   91 (249)
T ss_dssp             CTTCEEEEESCSSHHHHHHHHHHHHTTCEEEEEESCHHHH----HHTCSEEEECCTTTCHHHHHHHSCCCSEEEECCCC
T ss_pred             cCCCEEEEECCCCHHHHHHHHHHHHCCCEEEEEcCCHHHH----HhhCCeEEEeeHHHHHHHHHHHhcCCCEEEECCCC
Confidence            46889999998 9999999999999999999999886432    34442222 232 1222222223389999999984

>2zcu_A Uncharacterized oxidoreductase YTFG; alpha-beta sandwich; 1.80A {Escherichia coli} PDB: 2zcv_A*

Probab=96.83  E-value=0.0023  Score=56.41  Aligned_cols=94  Identities=15%  Similarity=0.198  Sum_probs=65.0

Q ss_pred             EEEEEcC-ChHHHHHHHHHHHc--CCeEEEEeCCchhHHHHHHHcCCCE-EecCCCHHHHHHhcCCccEEEEcCCCc---
Q 018067          186 HVGVVGL-GGLGHVAVKFAKAM--GVKVTVISTSPSKKSEAIERLGADS-FLVSRDQDEMQAAMGTMDGIIDTVSAV---  258 (361)
Q Consensus       186 ~vlV~Ga-g~vG~~a~~la~~~--g~~vi~~~~~~~~~~~~~~~~g~~~-vv~~~~~~~~~~~~~g~d~vid~~g~~---  258 (361)
                      +|||+|+ |.+|...++.+...  |.+|++++++.++...+ ...+... ..|..+++.+.++..++|+||++++..   
T Consensus         1 ~ilVtGatG~iG~~l~~~L~~~~~g~~V~~~~r~~~~~~~~-~~~~~~~~~~D~~d~~~~~~~~~~~d~vi~~a~~~~~~   79 (286)
T 2zcu_A            1 MIAITGATGQLGHYVIESLMKTVPASQIVAIVRNPAKAQAL-AAQGITVRQADYGDEAALTSALQGVEKLLLISSSEVGQ   79 (286)
T ss_dssp             CEEEESTTSHHHHHHHHHHTTTSCGGGEEEEESCTTTCHHH-HHTTCEEEECCTTCHHHHHHHTTTCSEEEECC------
T ss_pred             CEEEEcCCchHHHHHHHHHHhhCCCceEEEEEcChHhhhhh-hcCCCeEEEcCCCCHHHHHHHHhCCCEEEEeCCCCchH
Confidence            4899998 99999999988887  89999999987765544 2334432 236667777777778999999998852   


Q ss_pred             --ccHHHHHhcccc--CCEEEEecCC
Q 018067          259 --HPLMPLIGLLKS--QGKLVLVGAP  280 (361)
Q Consensus       259 --~~~~~~~~~l~~--~G~~v~~g~~  280 (361)
                        ......++.++.  -++++.++..
T Consensus        80 ~~~~~~~l~~a~~~~~~~~~v~~Ss~  105 (286)
T 2zcu_A           80 RAPQHRNVINAAKAAGVKFIAYTSLL  105 (286)
T ss_dssp             --CHHHHHHHHHHHHTCCEEEEEEET
T ss_pred             HHHHHHHHHHHHHHcCCCEEEEECCC
Confidence              123344444433  2588888653

>2ekl_A D-3-phosphoglycerate dehydrogenase; structural genomics, NPPSFA, national project on protein structural and functional analyses; HET: NAD; 1.77A {Sulfolobus tokodaii}

Probab=96.83  E-value=0.0041  Score=55.91  Aligned_cols=89  Identities=25%  Similarity=0.374  Sum_probs=67.1

Q ss_pred             CCCCEEEEEcCChHHHHHHHHHHHcCCeEEEEeCCchhHHHHHHHcCCCEEecCCCHHHHHHhcCCccEEEEcCCCcc--
Q 018067          182 KPGMHVGVVGLGGLGHVAVKFAKAMGVKVTVISTSPSKKSEAIERLGADSFLVSRDQDEMQAAMGTMDGIIDTVSAVH--  259 (361)
Q Consensus       182 ~~g~~vlV~Gag~vG~~a~~la~~~g~~vi~~~~~~~~~~~~~~~~g~~~vv~~~~~~~~~~~~~g~d~vid~~g~~~--  259 (361)
                      -.|.+|.|+|.|.+|...++.++.+|++|++.+++.++. . .+++|+..  .  +   ..++....|+|+.++....  
T Consensus       140 l~g~~vgIIG~G~IG~~~A~~l~~~G~~V~~~d~~~~~~-~-~~~~g~~~--~--~---l~ell~~aDvVvl~~P~~~~t  210 (313)
T 2ekl_A          140 LAGKTIGIVGFGRIGTKVGIIANAMGMKVLAYDILDIRE-K-AEKINAKA--V--S---LEELLKNSDVISLHVTVSKDA  210 (313)
T ss_dssp             CTTCEEEEESCSHHHHHHHHHHHHTTCEEEEECSSCCHH-H-HHHTTCEE--C--C---HHHHHHHCSEEEECCCCCTTS
T ss_pred             CCCCEEEEEeeCHHHHHHHHHHHHCCCEEEEECCCcchh-H-HHhcCcee--c--C---HHHHHhhCCEEEEeccCChHH
Confidence            468999999999999999999999999999999887653 3 35677652  1  2   1233346899999887422  


Q ss_pred             --cH-HHHHhccccCCEEEEecC
Q 018067          260 --PL-MPLIGLLKSQGKLVLVGA  279 (361)
Q Consensus       260 --~~-~~~~~~l~~~G~~v~~g~  279 (361)
                        .+ ...+..+++++.++.++.
T Consensus       211 ~~li~~~~l~~mk~ga~lIn~ar  233 (313)
T 2ekl_A          211 KPIIDYPQFELMKDNVIIVNTSR  233 (313)
T ss_dssp             CCSBCHHHHHHSCTTEEEEESSC
T ss_pred             HHhhCHHHHhcCCCCCEEEECCC
Confidence              12 456788999999999876

>4ina_A Saccharopine dehydrogenase; structural genomics, PSI-biology, northeast structural genom consortium, NESG, oxidoreductas; 2.49A {Wolinella succinogenes}

Probab=96.82  E-value=0.004  Score=58.15  Aligned_cols=95  Identities=17%  Similarity=0.181  Sum_probs=69.0

Q ss_pred             CEEEEEcCChHHHHHHHHHHHcC---CeEEEEeCCchhHHHHHHHcC------CC-EEecCCCHHHHHHhcC--CccEEE
Q 018067          185 MHVGVVGLGGLGHVAVKFAKAMG---VKVTVISTSPSKKSEAIERLG------AD-SFLVSRDQDEMQAAMG--TMDGII  252 (361)
Q Consensus       185 ~~vlV~Gag~vG~~a~~la~~~g---~~vi~~~~~~~~~~~~~~~~g------~~-~vv~~~~~~~~~~~~~--g~d~vi  252 (361)
                      .+|+|+|+|.+|..+++.+...|   .+|++++++.++...++++++      .. ..+|..+.+.+.++..  ++|+||
T Consensus         2 ~kVlIiGaGgiG~~ia~~L~~~g~~~~~V~v~~r~~~~~~~la~~l~~~~~~~~~~~~~D~~d~~~l~~~l~~~~~DvVi   81 (405)
T 4ina_A            2 AKVLQIGAGGVGGVVAHKMAMNREVFSHITLASRTLSKCQEIAQSIKAKGYGEIDITTVDADSIEELVALINEVKPQIVL   81 (405)
T ss_dssp             CEEEEECCSHHHHHHHHHHHTCTTTCCEEEEEESCHHHHHHHHHHHHHTTCCCCEEEECCTTCHHHHHHHHHHHCCSEEE
T ss_pred             CEEEEECCCHHHHHHHHHHHhCCCCceEEEEEECCHHHHHHHHHHhhhhcCCceEEEEecCCCHHHHHHHHHhhCCCEEE
Confidence            36899999999999999888887   489999999988877776654      22 2345556665665544  499999


Q ss_pred             EcCCCcccHHHHHhccccCCEEEEecC
Q 018067          253 DTVSAVHPLMPLIGLLKSQGKLVLVGA  279 (361)
Q Consensus       253 d~~g~~~~~~~~~~~l~~~G~~v~~g~  279 (361)
                      ++++..........+++.+-.++.+..
T Consensus        82 n~ag~~~~~~v~~a~l~~g~~vvD~a~  108 (405)
T 4ina_A           82 NIALPYQDLTIMEACLRTGVPYLDTAN  108 (405)
T ss_dssp             ECSCGGGHHHHHHHHHHHTCCEEESSC
T ss_pred             ECCCcccChHHHHHHHHhCCCEEEecC
Confidence            999865434455566677777776644

>2jl1_A Triphenylmethane reductase; oxidoreductase, bioremediation; HET: NAP GOL; 1.96A {Citrobacter SP} PDB: 2vrb_A* 2vrc_A 2vrc_D

Probab=96.81  E-value=0.0019  Score=56.93  Aligned_cols=94  Identities=13%  Similarity=0.187  Sum_probs=66.4

Q ss_pred             EEEEEcC-ChHHHHHHHHHHHc--CCeEEEEeCCchhHHHHHHHcCCCE-EecCCCHHHHHHhcCCccEEEEcCCCcc--
Q 018067          186 HVGVVGL-GGLGHVAVKFAKAM--GVKVTVISTSPSKKSEAIERLGADS-FLVSRDQDEMQAAMGTMDGIIDTVSAVH--  259 (361)
Q Consensus       186 ~vlV~Ga-g~vG~~a~~la~~~--g~~vi~~~~~~~~~~~~~~~~g~~~-vv~~~~~~~~~~~~~g~d~vid~~g~~~--  259 (361)
                      +|||+|+ |.+|...++.+...  |.+|++++++.++...+ ...+... ..|..+++.+.++..++|+||++++...  
T Consensus         2 ~ilVtGatG~iG~~l~~~L~~~~~g~~V~~~~r~~~~~~~l-~~~~~~~~~~D~~d~~~l~~~~~~~d~vi~~a~~~~~~   80 (287)
T 2jl1_A            2 SIAVTGATGQLGGLVIQHLLKKVPASQIIAIVRNVEKASTL-ADQGVEVRHGDYNQPESLQKAFAGVSKLLFISGPHYDN   80 (287)
T ss_dssp             CEEETTTTSHHHHHHHHHHTTTSCGGGEEEEESCTTTTHHH-HHTTCEEEECCTTCHHHHHHHTTTCSEEEECCCCCSCH
T ss_pred             eEEEEcCCchHHHHHHHHHHHhCCCCeEEEEEcCHHHHhHH-hhcCCeEEEeccCCHHHHHHHHhcCCEEEEcCCCCcCc
Confidence            5899998 99999999988887  89999999987765544 2334432 2356677777777789999999988521  


Q ss_pred             -----cHHHHHhccccC--CEEEEecCC
Q 018067          260 -----PLMPLIGLLKSQ--GKLVLVGAP  280 (361)
Q Consensus       260 -----~~~~~~~~l~~~--G~~v~~g~~  280 (361)
                           .....++.++..  ++++.++..
T Consensus        81 ~~n~~~~~~l~~a~~~~~~~~~v~~Ss~  108 (287)
T 2jl1_A           81 TLLIVQHANVVKAARDAGVKHIAYTGYA  108 (287)
T ss_dssp             HHHHHHHHHHHHHHHHTTCSEEEEEEET
T ss_pred             hHHHHHHHHHHHHHHHcCCCEEEEECCC
Confidence                 122344444433  488888753

>3i1j_A Oxidoreductase, short chain dehydrogenase/reducta; dimer, MIXE beta, structural genomics, PSI-2; 1.90A {Pseudomonas syringae PV} SCOP: c.2.1.0

Probab=96.81  E-value=0.0069  Score=52.15  Aligned_cols=76  Identities=21%  Similarity=0.375  Sum_probs=54.6

Q ss_pred             CCCCEEEEEcC-ChHHHHHHHHHHHcCCeEEEEeCCchhHHHHHHHc---C-C-CEE--ecC--CCHHHHHHh-------
Q 018067          182 KPGMHVGVVGL-GGLGHVAVKFAKAMGVKVTVISTSPSKKSEAIERL---G-A-DSF--LVS--RDQDEMQAA-------  244 (361)
Q Consensus       182 ~~g~~vlV~Ga-g~vG~~a~~la~~~g~~vi~~~~~~~~~~~~~~~~---g-~-~~v--v~~--~~~~~~~~~-------  244 (361)
                      -.|+++||.|+ |++|..++..+...|++|++++++.++..++.+++   + . ..+  ++.  .+.+.+.++       
T Consensus        12 l~~k~vlITGas~gIG~~ia~~l~~~G~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~d~d~~~~~~~~~~~~~~~~~   91 (247)
T 3i1j_A           12 LKGRVILVTGAARGIGAAAARAYAAHGASVVLLGRTEASLAEVSDQIKSAGQPQPLIIALNLENATAQQYRELAARVEHE   91 (247)
T ss_dssp             TTTCEEEESSTTSHHHHHHHHHHHHTTCEEEEEESCHHHHHHHHHHHHHTTSCCCEEEECCTTTCCHHHHHHHHHHHHHH
T ss_pred             CCCCEEEEeCCCChHHHHHHHHHHHCCCEEEEEecCHHHHHHHHHHHHhcCCCCceEEEeccccCCHHHHHHHHHHHHHh
Confidence            36789999997 99999999999999999999999988766654443   2 1 112  233  444333322       


Q ss_pred             cCCccEEEEcCCC
Q 018067          245 MGTMDGIIDTVSA  257 (361)
Q Consensus       245 ~~g~d~vid~~g~  257 (361)
                      .+++|++|+++|.
T Consensus        92 ~g~id~lv~nAg~  104 (247)
T 3i1j_A           92 FGRLDGLLHNASI  104 (247)
T ss_dssp             HSCCSEEEECCCC
T ss_pred             CCCCCEEEECCcc
Confidence            2479999999985

>3l9w_A Glutathione-regulated potassium-efflux system Pro linker, ancillary protein KEFF; potassium channel regulation, domains, antiport; HET: FMN AMP GSH; 1.75A {Escherichia coli} PDB: 3eyw_A* 3l9x_A*

Probab=96.81  E-value=0.0083  Score=56.10  Aligned_cols=95  Identities=17%  Similarity=0.338  Sum_probs=70.5

Q ss_pred             CCCEEEEEcCChHHHHHHHHHHHcCCeEEEEeCCchhHHHHHHHcCCCEEe-cCCCHHHHHHhc-CCccEEEEcCCCccc
Q 018067          183 PGMHVGVVGLGGLGHVAVKFAKAMGVKVTVISTSPSKKSEAIERLGADSFL-VSRDQDEMQAAM-GTMDGIIDTVSAVHP  260 (361)
Q Consensus       183 ~g~~vlV~Gag~vG~~a~~la~~~g~~vi~~~~~~~~~~~~~~~~g~~~vv-~~~~~~~~~~~~-~g~d~vid~~g~~~~  260 (361)
                      .+.+|+|+|.|.+|+.+++.++..|..|++++.++++.+.+ ++.|...++ |..+++.+..+. ..+|++|-+++....
T Consensus         3 ~~~~viIiG~Gr~G~~va~~L~~~g~~vvvId~d~~~v~~~-~~~g~~vi~GDat~~~~L~~agi~~A~~viv~~~~~~~   81 (413)
T 3l9w_A            3 HGMRVIIAGFGRFGQITGRLLLSSGVKMVVLDHDPDHIETL-RKFGMKVFYGDATRMDLLESAGAAKAEVLINAIDDPQT   81 (413)
T ss_dssp             -CCSEEEECCSHHHHHHHHHHHHTTCCEEEEECCHHHHHHH-HHTTCCCEESCTTCHHHHHHTTTTTCSEEEECCSSHHH
T ss_pred             CCCeEEEECCCHHHHHHHHHHHHCCCCEEEEECCHHHHHHH-HhCCCeEEEcCCCCHHHHHhcCCCccCEEEECCCChHH
Confidence            34679999999999999999999999999999999887766 577875433 556677776663 589999999998652


Q ss_pred             HHH---HHhccccCCEEEEec
Q 018067          261 LMP---LIGLLKSQGKLVLVG  278 (361)
Q Consensus       261 ~~~---~~~~l~~~G~~v~~g  278 (361)
                      -..   ..+.+.+.-+++.-.
T Consensus        82 n~~i~~~ar~~~p~~~Iiara  102 (413)
T 3l9w_A           82 NLQLTEMVKEHFPHLQIIARA  102 (413)
T ss_dssp             HHHHHHHHHHHCTTCEEEEEE
T ss_pred             HHHHHHHHHHhCCCCeEEEEE
Confidence            222   333444666676654

>3ek2_A Enoyl-(acyl-carrier-protein) reductase (NADH); ssgcid, oxidoreductase, structural genomics; 1.90A {Burkholderia pseudomallei 1710B} SCOP: c.2.1.2

Probab=96.81  E-value=0.007  Score=52.84  Aligned_cols=100  Identities=14%  Similarity=0.179  Sum_probs=67.0

Q ss_pred             CCCCCEEEEEcC---ChHHHHHHHHHHHcCCeEEEEeCCchh---HHHHHHHcCCC--EEecCCCHHHHHHh-------c
Q 018067          181 DKPGMHVGVVGL---GGLGHVAVKFAKAMGVKVTVISTSPSK---KSEAIERLGAD--SFLVSRDQDEMQAA-------M  245 (361)
Q Consensus       181 ~~~g~~vlV~Ga---g~vG~~a~~la~~~g~~vi~~~~~~~~---~~~~~~~~g~~--~vv~~~~~~~~~~~-------~  245 (361)
                      ..++++|||.|+   |++|..+++.+...|++|+++++++..   ..++.++.+..  ...|-.+++.+..+       .
T Consensus        11 ~~~~k~vlITGa~~~~giG~~ia~~l~~~G~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~Dv~~~~~v~~~~~~~~~~~   90 (271)
T 3ek2_A           11 FLDGKRILLTGLLSNRSIAYGIAKACKREGAELAFTYVGDRFKDRITEFAAEFGSELVFPCDVADDAQIDALFASLKTHW   90 (271)
T ss_dssp             TTTTCEEEECCCCSTTSHHHHHHHHHHHTTCEEEEEESSGGGHHHHHHHHHHTTCCCEEECCTTCHHHHHHHHHHHHHHC
T ss_pred             ccCCCEEEEeCCCCCCcHHHHHHHHHHHcCCCEEEEecchhhHHHHHHHHHHcCCcEEEECCCCCHHHHHHHHHHHHHHc
Confidence            357899999984   689999999999999999999887533   33333444422  23355565444332       2


Q ss_pred             CCccEEEEcCCCcc------------------------------cHHHHHhccccCCEEEEecCC
Q 018067          246 GTMDGIIDTVSAVH------------------------------PLMPLIGLLKSQGKLVLVGAP  280 (361)
Q Consensus       246 ~g~d~vid~~g~~~------------------------------~~~~~~~~l~~~G~~v~~g~~  280 (361)
                      +++|++|+++|...                              ..+.++..++++|+++.+++.
T Consensus        91 g~id~lv~nAg~~~~~~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~~~g~iv~isS~  155 (271)
T 3ek2_A           91 DSLDGLVHSIGFAPREAIAGDFLDGLTRENFRIAHDISAYSFPALAKAALPMLSDDASLLTLSYL  155 (271)
T ss_dssp             SCEEEEEECCCCCCGGGGSSCTTTTCCHHHHHHHHHHHTTHHHHHHHHHGGGEEEEEEEEEEECG
T ss_pred             CCCCEEEECCccCccccccCccccccCHHHHHHHHhhhHHHHHHHHHHHHHHhccCceEEEEecc
Confidence            47999999998421                              122344455668999998764

>1p77_A Shikimate 5-dehydrogenase; NADPH, oxidoreductase; HET: ATR; 1.95A {Haemophilus influenzae} SCOP: c.2.1.7 c.58.1.5 PDB: 1p74_A*

Probab=96.80  E-value=0.0017  Score=57.19  Aligned_cols=101  Identities=19%  Similarity=0.117  Sum_probs=67.1

Q ss_pred             HhhhcCCCCCCCEEEEEcCChHHHHHHHHHHHcCCeEEEEeCCchhHHHHHHHcCC--CE-EecCCCHHHHHHhc-CCcc
Q 018067          174 PLRFYGLDKPGMHVGVVGLGGLGHVAVKFAKAMGVKVTVISTSPSKKSEAIERLGA--DS-FLVSRDQDEMQAAM-GTMD  249 (361)
Q Consensus       174 ~l~~~~~~~~g~~vlV~Gag~vG~~a~~la~~~g~~vi~~~~~~~~~~~~~~~~g~--~~-vv~~~~~~~~~~~~-~g~d  249 (361)
                      ++++.+.--.+++++|+|+|++|.+++..+...|.+|+++.++.++.+.++++++.  .. ..+.      .++. +.+|
T Consensus       109 ~L~~~~~~~~~~~vlvlGaGg~g~a~a~~L~~~G~~v~v~~R~~~~a~~l~~~~~~~~~~~~~~~------~~~~~~~~D  182 (272)
T 1p77_A          109 DLQRLNWLRPNQHVLILGAGGATKGVLLPLLQAQQNIVLANRTFSKTKELAERFQPYGNIQAVSM------DSIPLQTYD  182 (272)
T ss_dssp             HHHHTTCCCTTCEEEEECCSHHHHTTHHHHHHTTCEEEEEESSHHHHHHHHHHHGGGSCEEEEEG------GGCCCSCCS
T ss_pred             HHHHhCCCcCCCEEEEECCcHHHHHHHHHHHHCCCEEEEEECCHHHHHHHHHHccccCCeEEeeH------HHhccCCCC
Confidence            34443322367899999999999999999999999999999998888888777653  11 1111      1222 4799


Q ss_pred             EEEEcCCCcccHH---HHHhccccCCEEEEecCC
Q 018067          250 GIIDTVSAVHPLM---PLIGLLKSQGKLVLVGAP  280 (361)
Q Consensus       250 ~vid~~g~~~~~~---~~~~~l~~~G~~v~~g~~  280 (361)
                      ++|++++......   .....++++..++.+...
T Consensus       183 ivIn~t~~~~~~~~~~i~~~~l~~~~~v~D~~y~  216 (272)
T 1p77_A          183 LVINATSAGLSGGTASVDAEILKLGSAFYDMQYA  216 (272)
T ss_dssp             EEEECCCC-------CCCHHHHHHCSCEEESCCC
T ss_pred             EEEECCCCCCCCCCCCCCHHHcCCCCEEEEeeCC
Confidence            9999998754211   012345566777777653

>1fjh_A 3alpha-hydroxysteroid dehydrogenase/carbonyl reductase; short chain dehydrogenase, SDR, xenobiotic, metyrapone, oligomerisation; 1.68A {Comamonas testosteroni} SCOP: c.2.1.2 PDB: 1fk8_A*

Probab=96.80  E-value=0.0015  Score=56.82  Aligned_cols=89  Identities=17%  Similarity=0.219  Sum_probs=59.0

Q ss_pred             CEEEEEcC-ChHHHHHHHHHHHcCCeEEEEeCCchhHHHHHHHcCCCEEecCCCHHHHHHhc----CCccEEEEcCCCcc
Q 018067          185 MHVGVVGL-GGLGHVAVKFAKAMGVKVTVISTSPSKKSEAIERLGADSFLVSRDQDEMQAAM----GTMDGIIDTVSAVH  259 (361)
Q Consensus       185 ~~vlV~Ga-g~vG~~a~~la~~~g~~vi~~~~~~~~~~~~~~~~g~~~vv~~~~~~~~~~~~----~g~d~vid~~g~~~  259 (361)
                      +++||.|+ |++|..+++.+...|++|++++++.++...       ....|..+.+.++++.    +++|++|+++|...
T Consensus         2 k~vlVTGas~gIG~~~a~~l~~~G~~V~~~~r~~~~~~~-------~~~~Dl~~~~~v~~~~~~~~~~id~lv~~Ag~~~   74 (257)
T 1fjh_A            2 SIIVISGCATGIGAATRKVLEAAGHQIVGIDIRDAEVIA-------DLSTAEGRKQAIADVLAKCSKGMDGLVLCAGLGP   74 (257)
T ss_dssp             CEEEEETTTSHHHHHHHHHHHHTTCEEEEEESSSSSEEC-------CTTSHHHHHHHHHHHHTTCTTCCSEEEECCCCCT
T ss_pred             CEEEEeCCCCHHHHHHHHHHHHCCCEEEEEeCCchhhcc-------ccccCCCCHHHHHHHHHHhCCCCCEEEECCCCCC
Confidence            36899998 999999999999999999999987654211       1011222333344332    46799999998532


Q ss_pred             ------------------cHHHHHhcccc--CCEEEEecCC
Q 018067          260 ------------------PLMPLIGLLKS--QGKLVLVGAP  280 (361)
Q Consensus       260 ------------------~~~~~~~~l~~--~G~~v~~g~~  280 (361)
                                        ..+.++..+++  .|+++.+++.
T Consensus        75 ~~~~~~~~~~~N~~g~~~l~~~~~~~~~~~~~g~iv~isS~  115 (257)
T 1fjh_A           75 QTKVLGNVVSVNYFGATELMDAFLPALKKGHQPAAVVISSV  115 (257)
T ss_dssp             TCSSHHHHHHHHTHHHHHHHHHHHHHHHTSSSCEEEEECCG
T ss_pred             CcccHHHHHHHhhHHHHHHHHHHHHHHhhcCCcEEEEECCh
Confidence                              12334444433  3899999864

>1omo_A Alanine dehydrogenase; two-domain, beta-sandwich-dimer, rossmann-fold NAD domain, human MU crystallin homolog; HET: NAD; 2.32A {Archaeoglobus fulgidus} SCOP: c.2.1.13 PDB: 1vll_A

Probab=96.80  E-value=0.0035  Score=56.62  Aligned_cols=95  Identities=13%  Similarity=0.176  Sum_probs=66.6

Q ss_pred             CCCCEEEEEcCChHHHHHHHHHHH-cCC-eEEEEeCCchhHHHHHHHcCCC--EEecCCCHHHHHHhcCCccEEEEcCCC
Q 018067          182 KPGMHVGVVGLGGLGHVAVKFAKA-MGV-KVTVISTSPSKKSEAIERLGAD--SFLVSRDQDEMQAAMGTMDGIIDTVSA  257 (361)
Q Consensus       182 ~~g~~vlV~Gag~vG~~a~~la~~-~g~-~vi~~~~~~~~~~~~~~~~g~~--~vv~~~~~~~~~~~~~g~d~vid~~g~  257 (361)
                      +...+++|+|+|.+|...+..+.. .+. +|.+.+++.++.+.++++++..  .+. ..+   ..+.. ++|+|+.|+..
T Consensus       123 ~~~~~v~iIGaG~~a~~~~~al~~~~~~~~V~v~~r~~~~a~~la~~~~~~~~~~~-~~~---~~e~v-~aDvVi~aTp~  197 (322)
T 1omo_A          123 KNSSVFGFIGCGTQAYFQLEALRRVFDIGEVKAYDVREKAAKKFVSYCEDRGISAS-VQP---AEEAS-RCDVLVTTTPS  197 (322)
T ss_dssp             TTCCEEEEECCSHHHHHHHHHHHHHSCCCEEEEECSSHHHHHHHHHHHHHTTCCEE-ECC---HHHHT-SSSEEEECCCC
T ss_pred             CCCCEEEEEcCcHHHHHHHHHHHHhCCccEEEEECCCHHHHHHHHHHHHhcCceEE-ECC---HHHHh-CCCEEEEeeCC
Confidence            567899999999999988877665 454 8888899988888887776521  122 222   33444 79999999987


Q ss_pred             cccHHHHHhccccCCEEEEecCCCC
Q 018067          258 VHPLMPLIGLLKSQGKLVLVGAPEK  282 (361)
Q Consensus       258 ~~~~~~~~~~l~~~G~~v~~g~~~~  282 (361)
                      ...+- ....++++-.++.+|....
T Consensus       198 ~~pv~-~~~~l~~G~~V~~ig~~~p  221 (322)
T 1omo_A          198 RKPVV-KAEWVEEGTHINAIGADGP  221 (322)
T ss_dssp             SSCCB-CGGGCCTTCEEEECSCCST
T ss_pred             CCcee-cHHHcCCCeEEEECCCCCC
Confidence            54221 1357788888888876543

>1uzm_A 3-oxoacyl-[acyl-carrier protein] reductase; beta-ketoacyl reductase, oxidoreductase; 1.49A {Mycobacterium tuberculosis} SCOP: c.2.1.2 PDB: 1uzn_A* 2ntn_A 1uzl_A

Probab=96.80  E-value=0.0025  Score=55.20  Aligned_cols=70  Identities=21%  Similarity=0.238  Sum_probs=51.4

Q ss_pred             CCCEEEEEcC-ChHHHHHHHHHHHcCCeEEEEeCCchhHHHHHHHcCCCEEecCCCHHHHHHh-------cCCccEEEEc
Q 018067          183 PGMHVGVVGL-GGLGHVAVKFAKAMGVKVTVISTSPSKKSEAIERLGADSFLVSRDQDEMQAA-------MGTMDGIIDT  254 (361)
Q Consensus       183 ~g~~vlV~Ga-g~vG~~a~~la~~~g~~vi~~~~~~~~~~~~~~~~g~~~vv~~~~~~~~~~~-------~~g~d~vid~  254 (361)
                      .++++||.|+ |++|..+++.+...|++|++++++.++...+.   +  ...|..+++.+.++       .+++|++|++
T Consensus        14 ~~k~vlVTGas~gIG~~ia~~l~~~G~~V~~~~r~~~~~~~~~---~--~~~D~~~~~~~~~~~~~~~~~~g~id~lv~~   88 (247)
T 1uzm_A           14 VSRSVLVTGGNRGIGLAIAQRLAADGHKVAVTHRGSGAPKGLF---G--VEVDVTDSDAVDRAFTAVEEHQGPVEVLVSN   88 (247)
T ss_dssp             CCCEEEETTTTSHHHHHHHHHHHHTTCEEEEEESSSCCCTTSE---E--EECCTTCHHHHHHHHHHHHHHHSSCSEEEEE
T ss_pred             CCCEEEEeCCCCHHHHHHHHHHHHCCCEEEEEeCChHHHHHhc---C--eeccCCCHHHHHHHHHHHHHHcCCCCEEEEC
Confidence            5688999997 99999999999999999999998765433221   1  23455665544332       2479999999


Q ss_pred             CCC
Q 018067          255 VSA  257 (361)
Q Consensus       255 ~g~  257 (361)
                      +|.
T Consensus        89 Ag~   91 (247)
T 1uzm_A           89 AGL   91 (247)
T ss_dssp             CSC
T ss_pred             CCC
Confidence            985

>3v2h_A D-beta-hydroxybutyrate dehydrogenase; structural genomics, PSI-biology, NEW YORK structural genomi research consortium, nysgrc; 3.00A {Sinorhizobium meliloti}

Probab=96.79  E-value=0.0083  Score=52.97  Aligned_cols=75  Identities=11%  Similarity=0.219  Sum_probs=52.6

Q ss_pred             CCCEEEEEcC-ChHHHHHHHHHHHcCCeEEEEeC-CchhHHHHHHHc----CCCEE---ecCCCHHHHHHh-------cC
Q 018067          183 PGMHVGVVGL-GGLGHVAVKFAKAMGVKVTVIST-SPSKKSEAIERL----GADSF---LVSRDQDEMQAA-------MG  246 (361)
Q Consensus       183 ~g~~vlV~Ga-g~vG~~a~~la~~~g~~vi~~~~-~~~~~~~~~~~~----g~~~v---v~~~~~~~~~~~-------~~  246 (361)
                      .++++||.|+ |++|..++..+...|++|+++++ ..++.+.+.+++    +....   .|-.+++.+.++       .+
T Consensus        24 ~~k~~lVTGas~GIG~~ia~~la~~G~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~~Dv~d~~~v~~~~~~~~~~~g  103 (281)
T 3v2h_A           24 MTKTAVITGSTSGIGLAIARTLAKAGANIVLNGFGAPDEIRTVTDEVAGLSSGTVLHHPADMTKPSEIADMMAMVADRFG  103 (281)
T ss_dssp             TTCEEEEETCSSHHHHHHHHHHHHTTCEEEEECCCCHHHHHHHHHHHHTTCSSCEEEECCCTTCHHHHHHHHHHHHHHTS
T ss_pred             CCCEEEEeCCCcHHHHHHHHHHHHCCCEEEEEeCCChHHHHHHHHHHhhccCCcEEEEeCCCCCHHHHHHHHHHHHHHCC
Confidence            4688999997 99999999999999999999998 444444443333    32221   244555443332       24


Q ss_pred             CccEEEEcCCC
Q 018067          247 TMDGIIDTVSA  257 (361)
Q Consensus       247 g~d~vid~~g~  257 (361)
                      ++|++|+++|.
T Consensus       104 ~iD~lv~nAg~  114 (281)
T 3v2h_A          104 GADILVNNAGV  114 (281)
T ss_dssp             SCSEEEECCCC
T ss_pred             CCCEEEECCCC
Confidence            79999999985

>3l4b_C TRKA K+ channel protien TM1088B; potassium channel, ring-gating complex, structural GEN PSI-2-2, protein structure initiative; HET: AMP; 3.45A {Thermotoga maritima}

Probab=96.79  E-value=0.0067  Score=51.36  Aligned_cols=74  Identities=12%  Similarity=0.061  Sum_probs=59.4

Q ss_pred             EEEEEcCChHHHHHHHHHHHcCCeEEEEeCCchhHHHHHHHcCCCEEe-cCCCHHHHHHh-cCCccEEEEcCCCcc
Q 018067          186 HVGVVGLGGLGHVAVKFAKAMGVKVTVISTSPSKKSEAIERLGADSFL-VSRDQDEMQAA-MGTMDGIIDTVSAVH  259 (361)
Q Consensus       186 ~vlV~Gag~vG~~a~~la~~~g~~vi~~~~~~~~~~~~~~~~g~~~vv-~~~~~~~~~~~-~~g~d~vid~~g~~~  259 (361)
                      +|+|+|+|.+|...++.+...|.+|+++++++++...+.+..+...+. |..+++.+.+. ...+|++|-+++...
T Consensus         2 ~iiIiG~G~~G~~la~~L~~~g~~v~vid~~~~~~~~l~~~~~~~~i~gd~~~~~~l~~a~i~~ad~vi~~~~~d~   77 (218)
T 3l4b_C            2 KVIIIGGETTAYYLARSMLSRKYGVVIINKDRELCEEFAKKLKATIIHGDGSHKEILRDAEVSKNDVVVILTPRDE   77 (218)
T ss_dssp             CEEEECCHHHHHHHHHHHHHTTCCEEEEESCHHHHHHHHHHSSSEEEESCTTSHHHHHHHTCCTTCEEEECCSCHH
T ss_pred             EEEEECCCHHHHHHHHHHHhCCCeEEEEECCHHHHHHHHHHcCCeEEEcCCCCHHHHHhcCcccCCEEEEecCCcH
Confidence            488999999999999999999999999999998887776667765333 44556666655 458999999999865

>1zmo_A Halohydrin dehalogenase; haloalcohol dehalogenase, short- chain dehydrogenase/reductase family, lyase; 2.00A {Arthrobacter SP}

Probab=96.78  E-value=0.0032  Score=54.37  Aligned_cols=73  Identities=15%  Similarity=0.060  Sum_probs=52.8

Q ss_pred             CCEEEEEcC-ChHHHHHHHHHHHcCCeEEEE-e--CCchhHHHHHHHc-CCCEEecCCCH-HHHHHh---cCCccEEEEc
Q 018067          184 GMHVGVVGL-GGLGHVAVKFAKAMGVKVTVI-S--TSPSKKSEAIERL-GADSFLVSRDQ-DEMQAA---MGTMDGIIDT  254 (361)
Q Consensus       184 g~~vlV~Ga-g~vG~~a~~la~~~g~~vi~~-~--~~~~~~~~~~~~~-g~~~vv~~~~~-~~~~~~---~~g~d~vid~  254 (361)
                      ++++||.|+ |++|.++++.+...|++|+++ +  ++.++...+.+++ +.+ +.+..+. ..+.++   .+++|++|++
T Consensus         1 ~k~vlVTGas~gIG~~ia~~l~~~G~~V~~~~~~~r~~~~~~~~~~~~~~~~-~~~~~~v~~~~~~~~~~~g~iD~lv~~   79 (244)
T 1zmo_A            1 MVIALVTHARHFAGPAAVEALTQDGYTVVCHDASFADAAERQRFESENPGTI-ALAEQKPERLVDATLQHGEAIDTIVSN   79 (244)
T ss_dssp             -CEEEESSTTSTTHHHHHHHHHHTTCEEEECCGGGGSHHHHHHHHHHSTTEE-ECCCCCGGGHHHHHGGGSSCEEEEEEC
T ss_pred             CCEEEEECCCChHHHHHHHHHHHCCCEEEEecCCcCCHHHHHHHHHHhCCCc-ccCHHHHHHHHHHHHHHcCCCCEEEEC
Confidence            467899987 999999999999999999999 6  8877777776666 332 3344332 233333   2479999999


Q ss_pred             CCC
Q 018067          255 VSA  257 (361)
Q Consensus       255 ~g~  257 (361)
                      +|.
T Consensus        80 Ag~   82 (244)
T 1zmo_A           80 DYI   82 (244)
T ss_dssp             CCC
T ss_pred             CCc
Confidence            984

>3uve_A Carveol dehydrogenase ((+)-trans-carveol dehydrog; ssgcid, structural genomics, seattle structural genomics CEN infectious disease; HET: NAD PG4; 1.55A {Mycobacterium avium} SCOP: c.2.1.0 PDB: 3uwr_A*

Probab=96.78  E-value=0.0048  Score=54.57  Aligned_cols=76  Identities=21%  Similarity=0.265  Sum_probs=53.6

Q ss_pred             CCCCEEEEEcC-ChHHHHHHHHHHHcCCeEEEEeCC----------------chhHHHHHHH---cCCCE---EecCCCH
Q 018067          182 KPGMHVGVVGL-GGLGHVAVKFAKAMGVKVTVISTS----------------PSKKSEAIER---LGADS---FLVSRDQ  238 (361)
Q Consensus       182 ~~g~~vlV~Ga-g~vG~~a~~la~~~g~~vi~~~~~----------------~~~~~~~~~~---~g~~~---vv~~~~~  238 (361)
                      -.|+++||.|+ +++|.++++.+...|++|++++++                .++..++.+.   .+...   ..|..++
T Consensus         9 l~~k~~lVTGas~gIG~aia~~la~~G~~V~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~Dv~~~   88 (286)
T 3uve_A            9 VEGKVAFVTGAARGQGRSHAVRLAQEGADIIAVDICKPIRAGVVDTAIPASTPEDLAETADLVKGHNRRIVTAEVDVRDY   88 (286)
T ss_dssp             TTTCEEEEESTTSHHHHHHHHHHHHTTCEEEEEECCSCSBTTBCCCSSCCCCHHHHHHHHHHHHTTTCCEEEEECCTTCH
T ss_pred             cCCCEEEEeCCCchHHHHHHHHHHHCCCeEEEEeccccccccccccccccCCHHHHHHHHHHHhhcCCceEEEEcCCCCH
Confidence            35789999997 999999999999999999999876                4444444333   23322   2355565


Q ss_pred             HHHHHh-------cCCccEEEEcCCC
Q 018067          239 DEMQAA-------MGTMDGIIDTVSA  257 (361)
Q Consensus       239 ~~~~~~-------~~g~d~vid~~g~  257 (361)
                      +.+.++       .+++|++|+++|.
T Consensus        89 ~~v~~~~~~~~~~~g~id~lv~nAg~  114 (286)
T 3uve_A           89 DALKAAVDSGVEQLGRLDIIVANAGI  114 (286)
T ss_dssp             HHHHHHHHHHHHHHSCCCEEEECCCC
T ss_pred             HHHHHHHHHHHHHhCCCCEEEECCcc
Confidence            544433       2479999999984

>1yxm_A Pecra, peroxisomal trans 2-enoyl COA reductase; perioxisomes, fatty acid synthesis, short-chain dehydrogenases/reductases, structural genomics; HET: ADE; 1.90A {Homo sapiens} SCOP: c.2.1.2

Probab=96.78  E-value=0.0029  Score=56.47  Aligned_cols=75  Identities=21%  Similarity=0.291  Sum_probs=54.6

Q ss_pred             CCCEEEEEcC-ChHHHHHHHHHHHcCCeEEEEeCCchhHHHHHHHc--------CCCE---EecCCCHHHHHHh------
Q 018067          183 PGMHVGVVGL-GGLGHVAVKFAKAMGVKVTVISTSPSKKSEAIERL--------GADS---FLVSRDQDEMQAA------  244 (361)
Q Consensus       183 ~g~~vlV~Ga-g~vG~~a~~la~~~g~~vi~~~~~~~~~~~~~~~~--------g~~~---vv~~~~~~~~~~~------  244 (361)
                      .++++||.|+ |.+|..++..+...|++|++++++.++...+.+++        +...   ..|..+++.+..+      
T Consensus        17 ~~k~vlVTGasggIG~~la~~l~~~G~~V~~~~r~~~~~~~~~~~l~~~~~~~~~~~~~~~~~D~~~~~~v~~~~~~~~~   96 (303)
T 1yxm_A           17 QGQVAIVTGGATGIGKAIVKELLELGSNVVIASRKLERLKSAADELQANLPPTKQARVIPIQCNIRNEEEVNNLVKSTLD   96 (303)
T ss_dssp             TTCEEEEETTTSHHHHHHHHHHHHTTCEEEEEESCHHHHHHHHHHHHHTSCTTCCCCEEEEECCTTCHHHHHHHHHHHHH
T ss_pred             CCCEEEEECCCcHHHHHHHHHHHHCCCEEEEEeCCHHHHHHHHHHHHhhccccCCccEEEEecCCCCHHHHHHHHHHHHH
Confidence            4688999998 99999999999999999999999887665554433        3221   2345555444332      


Q ss_pred             -cCCccEEEEcCCC
Q 018067          245 -MGTMDGIIDTVSA  257 (361)
Q Consensus       245 -~~g~d~vid~~g~  257 (361)
                       .+++|++|+++|.
T Consensus        97 ~~g~id~li~~Ag~  110 (303)
T 1yxm_A           97 TFGKINFLVNNGGG  110 (303)
T ss_dssp             HHSCCCEEEECCCC
T ss_pred             HcCCCCEEEECCCC
Confidence             2479999999983

>3e05_A Precorrin-6Y C5,15-methyltransferase (decarboxyla; porphyrin metabolism, S-adenosyl-methionine; 1.80A {Geobacter metallireducens} SCOP: c.66.1.0

Probab=96.77  E-value=0.0067  Score=50.60  Aligned_cols=99  Identities=14%  Similarity=0.148  Sum_probs=66.3

Q ss_pred             CCCCCCCEEEEEcCChHHHHHHHHHHHc-CCeEEEEeCCchhHHHHHH---HcCCC--EEecCCCHHHHHHhcCCccEEE
Q 018067          179 GLDKPGMHVGVVGLGGLGHVAVKFAKAM-GVKVTVISTSPSKKSEAIE---RLGAD--SFLVSRDQDEMQAAMGTMDGII  252 (361)
Q Consensus       179 ~~~~~g~~vlV~Gag~vG~~a~~la~~~-g~~vi~~~~~~~~~~~~~~---~~g~~--~vv~~~~~~~~~~~~~g~d~vi  252 (361)
                      ..++++++||-+|+|. |..++.+++.. ..+|+.++.+++....+.+   ..|.+  .++..+-.+... ..+.+|+|+
T Consensus        36 l~~~~~~~vLDiG~G~-G~~~~~la~~~~~~~v~~vD~s~~~~~~a~~~~~~~~~~~v~~~~~d~~~~~~-~~~~~D~i~  113 (204)
T 3e05_A           36 LRLQDDLVMWDIGAGS-ASVSIEASNLMPNGRIFALERNPQYLGFIRDNLKKFVARNVTLVEAFAPEGLD-DLPDPDRVF  113 (204)
T ss_dssp             TTCCTTCEEEEETCTT-CHHHHHHHHHCTTSEEEEEECCHHHHHHHHHHHHHHTCTTEEEEECCTTTTCT-TSCCCSEEE
T ss_pred             cCCCCCCEEEEECCCC-CHHHHHHHHHCCCCEEEEEeCCHHHHHHHHHHHHHhCCCcEEEEeCChhhhhh-cCCCCCEEE
Confidence            3468999999999985 88889999886 3699999998876555433   23432  222221111111 114699999


Q ss_pred             EcCCC---cccHHHHHhccccCCEEEEecC
Q 018067          253 DTVSA---VHPLMPLIGLLKSQGKLVLVGA  279 (361)
Q Consensus       253 d~~g~---~~~~~~~~~~l~~~G~~v~~g~  279 (361)
                      .....   ...+..+.+.|+++|+++....
T Consensus       114 ~~~~~~~~~~~l~~~~~~LkpgG~l~~~~~  143 (204)
T 3e05_A          114 IGGSGGMLEEIIDAVDRRLKSEGVIVLNAV  143 (204)
T ss_dssp             ESCCTTCHHHHHHHHHHHCCTTCEEEEEEC
T ss_pred             ECCCCcCHHHHHHHHHHhcCCCeEEEEEec
Confidence            87652   3346788899999999998643

>2hq1_A Glucose/ribitol dehydrogenase; CTH-1438, structural genomics, southeast collaboratory for structural genomics, secsg, PSI; 1.90A {Clostridium thermocellum}

Probab=96.77  E-value=0.0049  Score=53.06  Aligned_cols=75  Identities=17%  Similarity=0.276  Sum_probs=50.7

Q ss_pred             CCCEEEEEcC-ChHHHHHHHHHHHcCCeEEEE-eCCchhHHHHHHH---cCCCE---EecCCCHHHHHHhc-------CC
Q 018067          183 PGMHVGVVGL-GGLGHVAVKFAKAMGVKVTVI-STSPSKKSEAIER---LGADS---FLVSRDQDEMQAAM-------GT  247 (361)
Q Consensus       183 ~g~~vlV~Ga-g~vG~~a~~la~~~g~~vi~~-~~~~~~~~~~~~~---~g~~~---vv~~~~~~~~~~~~-------~g  247 (361)
                      .++++||.|+ |.+|..+++.+...|++|+++ .+++++...+.+.   .+.+.   ..|..+++.+.++.       ++
T Consensus         4 ~~~~vlItGasggiG~~~a~~l~~~G~~V~~~~~r~~~~~~~~~~~~~~~~~~~~~~~~D~~~~~~~~~~~~~~~~~~~~   83 (247)
T 2hq1_A            4 KGKTAIVTGSSRGLGKAIAWKLGNMGANIVLNGSPASTSLDATAEEFKAAGINVVVAKGDVKNPEDVENMVKTAMDAFGR   83 (247)
T ss_dssp             TTCEEEESSCSSHHHHHHHHHHHHTTCEEEEEECTTCSHHHHHHHHHHHTTCCEEEEESCTTSHHHHHHHHHHHHHHHSC
T ss_pred             CCcEEEEECCCchHHHHHHHHHHHCCCEEEEEcCcCHHHHHHHHHHHHhcCCcEEEEECCCCCHHHHHHHHHHHHHhcCC
Confidence            4678999997 999999999999999999998 5555544443332   34332   23555555444332       47


Q ss_pred             ccEEEEcCCC
Q 018067          248 MDGIIDTVSA  257 (361)
Q Consensus       248 ~d~vid~~g~  257 (361)
                      +|++|+++|.
T Consensus        84 ~d~vi~~Ag~   93 (247)
T 2hq1_A           84 IDILVNNAGI   93 (247)
T ss_dssp             CCEEEECC--
T ss_pred             CCEEEECCCC
Confidence            9999999985

>1ooe_A Dihydropteridine reductase; structural genomics, PSI, protein structure initiative, southeast collaboratory for structural genomics; HET: MES; 1.65A {Caenorhabditis elegans} SCOP: c.2.1.2

Probab=96.77  E-value=0.0013  Score=56.55  Aligned_cols=91  Identities=24%  Similarity=0.266  Sum_probs=60.7

Q ss_pred             CCEEEEEcC-ChHHHHHHHHHHHcCCeEEEEeCCchhHHHHHHHcCCCEE--ecCCCHHHHHHh-------c--CCccEE
Q 018067          184 GMHVGVVGL-GGLGHVAVKFAKAMGVKVTVISTSPSKKSEAIERLGADSF--LVSRDQDEMQAA-------M--GTMDGI  251 (361)
Q Consensus       184 g~~vlV~Ga-g~vG~~a~~la~~~g~~vi~~~~~~~~~~~~~~~~g~~~v--v~~~~~~~~~~~-------~--~g~d~v  251 (361)
                      ++++||.|+ |++|..+++.+...|++|++++++.++..      +....  .|..+++.+.++       .  +++|++
T Consensus         3 ~k~vlITGas~gIG~~~a~~l~~~G~~V~~~~r~~~~~~------~~~~~~~~D~~~~~~~~~~~~~~~~~~~~g~id~l   76 (236)
T 1ooe_A            3 SGKVIVYGGKGALGSAILEFFKKNGYTVLNIDLSANDQA------DSNILVDGNKNWTEQEQSILEQTASSLQGSQVDGV   76 (236)
T ss_dssp             CEEEEEETTTSHHHHHHHHHHHHTTEEEEEEESSCCTTS------SEEEECCTTSCHHHHHHHHHHHHHHHHTTCCEEEE
T ss_pred             CCEEEEECCCcHHHHHHHHHHHHCCCEEEEEecCccccc------cccEEEeCCCCCHHHHHHHHHHHHHHhCCCCCCEE
Confidence            568999997 99999999999999999999998876431      10111  123333333222       1  579999


Q ss_pred             EEcCCCc--------c------------------cHHHHHhccccCCEEEEecCC
Q 018067          252 IDTVSAV--------H------------------PLMPLIGLLKSQGKLVLVGAP  280 (361)
Q Consensus       252 id~~g~~--------~------------------~~~~~~~~l~~~G~~v~~g~~  280 (361)
                      |+++|..        .                  ..+.++..++++|+++.+++.
T Consensus        77 v~~Ag~~~~~~~~~~~~~~~~~~~~~~N~~g~~~l~~~~~~~~~~~g~iv~isS~  131 (236)
T 1ooe_A           77 FCVAGGWAGGSASSKDFVKNADLMIKQSVWSSAIAAKLATTHLKPGGLLQLTGAA  131 (236)
T ss_dssp             EECCCCCCCBCTTSTTHHHHHHHHHHHHHHHHHHHHHHHHHHEEEEEEEEEECCG
T ss_pred             EECCcccCCCCCcccCCHHHHHHHHHHHhHHHHHHHHHHHHHhccCCEEEEECch
Confidence            9999831        1                  122344555567899999864

>1i1n_A Protein-L-isoaspartate O-methyltransferase; S-adenosyl homocysteine, protein repair; HET: SAH; 1.50A {Homo sapiens} SCOP: c.66.1.7 PDB: 1kr5_A*

Probab=96.74  E-value=0.0036  Score=53.18  Aligned_cols=98  Identities=26%  Similarity=0.224  Sum_probs=66.0

Q ss_pred             CCCCCEEEEEcCChHHHHHHHHHHHcC--CeEEEEeCCchhHHHHHH---HcC-----C-CEEecCCCHHHHHHhcCCcc
Q 018067          181 DKPGMHVGVVGLGGLGHVAVKFAKAMG--VKVTVISTSPSKKSEAIE---RLG-----A-DSFLVSRDQDEMQAAMGTMD  249 (361)
Q Consensus       181 ~~~g~~vlV~Gag~vG~~a~~la~~~g--~~vi~~~~~~~~~~~~~~---~~g-----~-~~vv~~~~~~~~~~~~~g~d  249 (361)
                      ++++++||-+|+|. |..+..+++..|  .+|+.++.+++..+.+.+   ..+     . +..+...+........+.+|
T Consensus        75 ~~~~~~vLDiG~G~-G~~~~~la~~~~~~~~v~~vD~s~~~~~~a~~~~~~~~~~~~~~~~v~~~~~d~~~~~~~~~~fD  153 (226)
T 1i1n_A           75 LHEGAKALDVGSGS-GILTACFARMVGCTGKVIGIDHIKELVDDSVNNVRKDDPTLLSSGRVQLVVGDGRMGYAEEAPYD  153 (226)
T ss_dssp             SCTTCEEEEETCTT-SHHHHHHHHHHCTTCEEEEEESCHHHHHHHHHHHHHHCTHHHHTSSEEEEESCGGGCCGGGCCEE
T ss_pred             CCCCCEEEEEcCCc-CHHHHHHHHHhCCCcEEEEEeCCHHHHHHHHHHHHhhcccccCCCcEEEEECCcccCcccCCCcC
Confidence            67899999999875 888888888876  589999988876544432   222     1 11111122111111134799


Q ss_pred             EEEEcCCCcccHHHHHhccccCCEEEEecC
Q 018067          250 GIIDTVSAVHPLMPLIGLLKSQGKLVLVGA  279 (361)
Q Consensus       250 ~vid~~g~~~~~~~~~~~l~~~G~~v~~g~  279 (361)
                      +|+........+..+.+.|+++|+++..-.
T Consensus       154 ~i~~~~~~~~~~~~~~~~LkpgG~lv~~~~  183 (226)
T 1i1n_A          154 AIHVGAAAPVVPQALIDQLKPGGRLILPVG  183 (226)
T ss_dssp             EEEECSBBSSCCHHHHHTEEEEEEEEEEES
T ss_pred             EEEECCchHHHHHHHHHhcCCCcEEEEEEe
Confidence            998877666667899999999999987643

>2qq5_A DHRS1, dehydrogenase/reductase SDR family member 1; short-chain, structura genomics consortium, SGC, oxidoreductase; 1.80A {Homo sapiens}

Probab=96.74  E-value=0.0068  Score=52.76  Aligned_cols=74  Identities=16%  Similarity=0.219  Sum_probs=53.6

Q ss_pred             CCCEEEEEcC-ChHHHHHHHHHHHcCCeEEEEeCCchhHHHHHHHc---CCCE---EecCCCHHHHHH----h----cCC
Q 018067          183 PGMHVGVVGL-GGLGHVAVKFAKAMGVKVTVISTSPSKKSEAIERL---GADS---FLVSRDQDEMQA----A----MGT  247 (361)
Q Consensus       183 ~g~~vlV~Ga-g~vG~~a~~la~~~g~~vi~~~~~~~~~~~~~~~~---g~~~---vv~~~~~~~~~~----~----~~g  247 (361)
                      .++++||.|+ |++|..+++.+...|++|++++++.++...+.+++   +...   ..|-.+++.+..    +    .++
T Consensus         4 ~~k~vlVTGas~gIG~~ia~~l~~~G~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~Dv~~~~~v~~~~~~~~~~~~g~   83 (260)
T 2qq5_A            4 NGQVCVVTGASRGIGRGIALQLCKAGATVYITGRHLDTLRVVAQEAQSLGGQCVPVVCDSSQESEVRSLFEQVDREQQGR   83 (260)
T ss_dssp             TTCEEEESSTTSHHHHHHHHHHHHTTCEEEEEESCHHHHHHHHHHHHHHSSEEEEEECCTTSHHHHHHHHHHHHHHHTTC
T ss_pred             CCCEEEEeCCCchHHHHHHHHHHHCCCEEEEEeCCHHHHHHHHHHHHHcCCceEEEECCCCCHHHHHHHHHHHHHhcCCC
Confidence            4678999987 99999999999999999999999887765554443   4321   234555443322    2    357


Q ss_pred             ccEEEEcCC
Q 018067          248 MDGIIDTVS  256 (361)
Q Consensus       248 ~d~vid~~g  256 (361)
                      +|++|+++|
T Consensus        84 id~lvnnAg   92 (260)
T 2qq5_A           84 LDVLVNNAY   92 (260)
T ss_dssp             CCEEEECCC
T ss_pred             ceEEEECCc
Confidence            899999995

>4da9_A Short-chain dehydrogenase/reductase; structural genomics, protein structure initiative, PSI-biology; 2.50A {Sinorhizobium meliloti}

Probab=96.74  E-value=0.0039  Score=55.12  Aligned_cols=76  Identities=21%  Similarity=0.248  Sum_probs=52.4

Q ss_pred             CCCCEEEEEcC-ChHHHHHHHHHHHcCCeEEEEeC-CchhHHHHHHH---cCCCE---EecCCCHHHHHHh-------cC
Q 018067          182 KPGMHVGVVGL-GGLGHVAVKFAKAMGVKVTVIST-SPSKKSEAIER---LGADS---FLVSRDQDEMQAA-------MG  246 (361)
Q Consensus       182 ~~g~~vlV~Ga-g~vG~~a~~la~~~g~~vi~~~~-~~~~~~~~~~~---~g~~~---vv~~~~~~~~~~~-------~~  246 (361)
                      ..++++||.|+ |++|.++++.+...|++|+++++ +.++...+.++   .+...   ..|..+++.+.++       .+
T Consensus        27 ~~~k~~lVTGas~GIG~aia~~la~~G~~V~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~Dv~d~~~v~~~~~~~~~~~g  106 (280)
T 4da9_A           27 KARPVAIVTGGRRGIGLGIARALAASGFDIAITGIGDAEGVAPVIAELSGLGARVIFLRADLADLSSHQATVDAVVAEFG  106 (280)
T ss_dssp             CCCCEEEEETTTSHHHHHHHHHHHHTTCEEEEEESCCHHHHHHHHHHHHHTTCCEEEEECCTTSGGGHHHHHHHHHHHHS
T ss_pred             cCCCEEEEecCCCHHHHHHHHHHHHCCCeEEEEeCCCHHHHHHHHHHHHhcCCcEEEEEecCCCHHHHHHHHHHHHHHcC
Confidence            45788999997 99999999999999999999985 55444444333   34332   2244554433322       24


Q ss_pred             CccEEEEcCCC
Q 018067          247 TMDGIIDTVSA  257 (361)
Q Consensus       247 g~d~vid~~g~  257 (361)
                      ++|++|+++|.
T Consensus       107 ~iD~lvnnAg~  117 (280)
T 4da9_A          107 RIDCLVNNAGI  117 (280)
T ss_dssp             CCCEEEEECC-
T ss_pred             CCCEEEECCCc
Confidence            89999999986

>3o38_A Short chain dehydrogenase; tuberculosis, ortholog from A non-pathogenic dehydrogenase, structural genomics; 1.95A {Mycobacterium smegmatis}

Probab=96.74  E-value=0.0052  Score=53.63  Aligned_cols=76  Identities=20%  Similarity=0.298  Sum_probs=55.9

Q ss_pred             CCCCEEEEEcC-C-hHHHHHHHHHHHcCCeEEEEeCCchhHHHHHHHc---C-CC---EEecCCCHHHHHHh-------c
Q 018067          182 KPGMHVGVVGL-G-GLGHVAVKFAKAMGVKVTVISTSPSKKSEAIERL---G-AD---SFLVSRDQDEMQAA-------M  245 (361)
Q Consensus       182 ~~g~~vlV~Ga-g-~vG~~a~~la~~~g~~vi~~~~~~~~~~~~~~~~---g-~~---~vv~~~~~~~~~~~-------~  245 (361)
                      -.++++||.|+ | ++|..++..+...|++|++++++.++..++.+++   + ..   ...|..+.+.+.++       .
T Consensus        20 l~~k~vlITGasg~GIG~~~a~~l~~~G~~V~~~~r~~~~~~~~~~~l~~~~~~~~~~~~~Dl~~~~~v~~~~~~~~~~~   99 (266)
T 3o38_A           20 LKGKVVLVTAAAGTGIGSTTARRALLEGADVVISDYHERRLGETRDQLADLGLGRVEAVVCDVTSTEAVDALITQTVEKA   99 (266)
T ss_dssp             TTTCEEEESSCSSSSHHHHHHHHHHHTTCEEEEEESCHHHHHHHHHHHHTTCSSCEEEEECCTTCHHHHHHHHHHHHHHH
T ss_pred             CCCCEEEEECCCCCchHHHHHHHHHHCCCEEEEecCCHHHHHHHHHHHHhcCCCceEEEEeCCCCHHHHHHHHHHHHHHh
Confidence            35789999998 7 7999999999999999999999988776665554   2 22   12355555443332       2


Q ss_pred             CCccEEEEcCCC
Q 018067          246 GTMDGIIDTVSA  257 (361)
Q Consensus       246 ~g~d~vid~~g~  257 (361)
                      +++|++|+++|.
T Consensus       100 g~id~li~~Ag~  111 (266)
T 3o38_A          100 GRLDVLVNNAGL  111 (266)
T ss_dssp             SCCCEEEECCCC
T ss_pred             CCCcEEEECCCc
Confidence            479999999984

>1dhr_A Dihydropteridine reductase; oxidoreductase(acting on NADH or NADPH); HET: NAD; 2.30A {Rattus norvegicus} SCOP: c.2.1.2 PDB: 1dir_A* 1hdr_A*

Probab=96.74  E-value=0.002  Score=55.52  Aligned_cols=93  Identities=22%  Similarity=0.217  Sum_probs=61.4

Q ss_pred             CCCCEEEEEcC-ChHHHHHHHHHHHcCCeEEEEeCCchhHHHHHHHcCCCEE--ecCCCHHHHHHh-------c--CCcc
Q 018067          182 KPGMHVGVVGL-GGLGHVAVKFAKAMGVKVTVISTSPSKKSEAIERLGADSF--LVSRDQDEMQAA-------M--GTMD  249 (361)
Q Consensus       182 ~~g~~vlV~Ga-g~vG~~a~~la~~~g~~vi~~~~~~~~~~~~~~~~g~~~v--v~~~~~~~~~~~-------~--~g~d  249 (361)
                      ..++++||.|+ |++|..+++.+...|++|++++++.++..      +....  .|..+++.+.++       .  +++|
T Consensus         5 ~~~k~vlVTGas~gIG~~ia~~l~~~G~~V~~~~r~~~~~~------~~~~~~~~D~~~~~~v~~~~~~~~~~~~~g~iD   78 (241)
T 1dhr_A            5 GEARRVLVYGGRGALGSRCVQAFRARNWWVASIDVVENEEA------SASVIVKMTDSFTEQADQVTAEVGKLLGDQKVD   78 (241)
T ss_dssp             -CCCEEEEETTTSHHHHHHHHHHHTTTCEEEEEESSCCTTS------SEEEECCCCSCHHHHHHHHHHHHHHHHTTCCEE
T ss_pred             CCCCEEEEECCCcHHHHHHHHHHHhCCCEEEEEeCChhhcc------CCcEEEEcCCCCHHHHHHHHHHHHHHhCCCCCC
Confidence            45788999997 99999999999999999999998875431      11111  233333333222       1  5799


Q ss_pred             EEEEcCCCc--------c------------------cHHHHHhccccCCEEEEecCC
Q 018067          250 GIIDTVSAV--------H------------------PLMPLIGLLKSQGKLVLVGAP  280 (361)
Q Consensus       250 ~vid~~g~~--------~------------------~~~~~~~~l~~~G~~v~~g~~  280 (361)
                      ++|+++|..        .                  ..+.++..++++|+++.+++.
T Consensus        79 ~lv~~Ag~~~~~~~~~~~~~~~~~~~~~~N~~~~~~~~~~~~~~~~~~g~iv~isS~  135 (241)
T 1dhr_A           79 AILCVAGGWAGGNAKSKSLFKNCDLMWKQSIWTSTISSHLATKHLKEGGLLTLAGAK  135 (241)
T ss_dssp             EEEECCCCCCCBCTTCTTHHHHHHHHHHHHHHHHHHHHHHHHHHEEEEEEEEEECCG
T ss_pred             EEEEcccccCCCCCcccCCHHHHHHHHHHhhHHHHHHHHHHHHhhccCCEEEEECCH
Confidence            999999841        0                  112234455567999999864

>1jg1_A PIMT;, protein-L-isoaspartate O-methyltransferase; rossmann methyltransferase, protein repair isomerization; HET: SAH; 1.20A {Pyrococcus furiosus} SCOP: c.66.1.7 PDB: 1jg2_A* 1jg3_A* 1jg4_A*

Probab=96.73  E-value=0.0028  Score=54.34  Aligned_cols=96  Identities=30%  Similarity=0.308  Sum_probs=67.0

Q ss_pred             CCCCCCEEEEEcCChHHHHHHHHHHHcCCeEEEEeCCchhHHHHHH---HcCCCE-EecCCCHHHHHHh--cCCccEEEE
Q 018067          180 LDKPGMHVGVVGLGGLGHVAVKFAKAMGVKVTVISTSPSKKSEAIE---RLGADS-FLVSRDQDEMQAA--MGTMDGIID  253 (361)
Q Consensus       180 ~~~~g~~vlV~Gag~vG~~a~~la~~~g~~vi~~~~~~~~~~~~~~---~~g~~~-vv~~~~~~~~~~~--~~g~d~vid  253 (361)
                      .++++++||.+|+| .|..++.+++..+.+|+.++.+++....+.+   ..|... .+...+.  ....  ..++|+|+.
T Consensus        88 ~~~~~~~vLdiG~G-~G~~~~~la~~~~~~v~~vD~~~~~~~~a~~~~~~~~~~~v~~~~~d~--~~~~~~~~~fD~Ii~  164 (235)
T 1jg1_A           88 NLKPGMNILEVGTG-SGWNAALISEIVKTDVYTIERIPELVEFAKRNLERAGVKNVHVILGDG--SKGFPPKAPYDVIIV  164 (235)
T ss_dssp             TCCTTCCEEEECCT-TSHHHHHHHHHHCSCEEEEESCHHHHHHHHHHHHHTTCCSEEEEESCG--GGCCGGGCCEEEEEE
T ss_pred             CCCCCCEEEEEeCC-cCHHHHHHHHHhCCEEEEEeCCHHHHHHHHHHHHHcCCCCcEEEECCc--ccCCCCCCCccEEEE
Confidence            46889999999998 6899999999877899999988766544433   234322 1111221  1111  125999998


Q ss_pred             cCCCcccHHHHHhccccCCEEEEec
Q 018067          254 TVSAVHPLMPLIGLLKSQGKLVLVG  278 (361)
Q Consensus       254 ~~g~~~~~~~~~~~l~~~G~~v~~g  278 (361)
                      +..-......+.+.|+++|+++..-
T Consensus       165 ~~~~~~~~~~~~~~L~pgG~lvi~~  189 (235)
T 1jg1_A          165 TAGAPKIPEPLIEQLKIGGKLIIPV  189 (235)
T ss_dssp             CSBBSSCCHHHHHTEEEEEEEEEEE
T ss_pred             CCcHHHHHHHHHHhcCCCcEEEEEE
Confidence            7776665778999999999988753

>3oml_A GH14720P, peroxisomal multifunctional enzyme type 2, CG3415; rossmann fold, hot-DOG fold, hydratase 2 motif, peroxisomes, oxidoreductase; 2.15A {Drosophila melanogaster}

Probab=96.71  E-value=0.0048  Score=60.91  Aligned_cols=75  Identities=19%  Similarity=0.236  Sum_probs=48.5

Q ss_pred             CCCEEEEEcC-ChHHHHHHHHHHHcCCeEEEEeC---------CchhHHHHH---HHcCCCEEecCCCHHHHHHhc----
Q 018067          183 PGMHVGVVGL-GGLGHVAVKFAKAMGVKVTVIST---------SPSKKSEAI---ERLGADSFLVSRDQDEMQAAM----  245 (361)
Q Consensus       183 ~g~~vlV~Ga-g~vG~~a~~la~~~g~~vi~~~~---------~~~~~~~~~---~~~g~~~vv~~~~~~~~~~~~----  245 (361)
                      .|+++||.|+ +++|.+++..+...|++|+++++         +.++...+.   +..+...+.|..+.+.+.++.    
T Consensus        18 ~gk~~lVTGas~GIG~aiA~~La~~Ga~Vv~~~r~~~~~~~~~~~~~~~~~~~~i~~~~~~~~~D~~d~~~~~~~~~~~~   97 (613)
T 3oml_A           18 DGRVAVVTGAGAGLGREYALLFAERGAKVVVNDLGGTHSGDGASQRAADIVVDEIRKAGGEAVADYNSVIDGAKVIETAI   97 (613)
T ss_dssp             TTCEEEETTTTSHHHHHHHHHHHHTTCEEEEC--------------CHHHHHHHHHHTTCCEEECCCCGGGHHHHHC---
T ss_pred             CCCEEEEeCCCcHHHHHHHHHHHHCCCEEEEEeCCcccccccCCHHHHHHHHHHHHHhCCeEEEEeCCHHHHHHHHHHHH
Confidence            5788999987 99999999999999999999876         444333333   334555566766654433322    


Q ss_pred             ---CCccEEEEcCCC
Q 018067          246 ---GTMDGIIDTVSA  257 (361)
Q Consensus       246 ---~g~d~vid~~g~  257 (361)
                         +++|++|+++|.
T Consensus        98 ~~~g~iDiLVnnAGi  112 (613)
T 3oml_A           98 KAFGRVDILVNNAGI  112 (613)
T ss_dssp             -------CEECCCCC
T ss_pred             HHCCCCcEEEECCCC
Confidence               369999999985

>1vl6_A Malate oxidoreductase; TM0542, NAD-dependent malic enzyme, structural genomics, JCS protein structure initiative, PSI; 2.61A {Thermotoga maritima} SCOP: c.2.1.7 c.58.1.3 PDB: 2hae_A*

Probab=96.70  E-value=0.0089  Score=54.74  Aligned_cols=125  Identities=16%  Similarity=0.151  Sum_probs=77.1

Q ss_pred             chhhhhhhhHhhhcCCCCCCCEEEEEcCChHHHHHHHHHHHcCC-eEEEEeCC----chh----HHHHHHHcCCCEEecC
Q 018067          165 LCAGITVYSPLRFYGLDKPGMHVGVVGLGGLGHVAVKFAKAMGV-KVTVISTS----PSK----KSEAIERLGADSFLVS  235 (361)
Q Consensus       165 ~~~~~ta~~~l~~~~~~~~g~~vlV~Gag~vG~~a~~la~~~g~-~vi~~~~~----~~~----~~~~~~~~g~~~vv~~  235 (361)
                      .....+.+.+++..+.--+..+|+|+|+|..|..+++++..+|+ +|+++++.    .++    +....+.|.-..- ..
T Consensus       173 sV~lAal~~A~~i~g~~l~~~kVVv~GAGaAG~~iAkll~~~G~~~I~v~Dr~Gli~~~R~~~~L~~~k~~~A~~~~-~~  251 (388)
T 1vl6_A          173 VVVSAAFLNALKLTEKKIEEVKVVVNGIGAAGYNIVKFLLDLGVKNVVAVDRKGILNENDPETCLNEYHLEIARITN-PE  251 (388)
T ss_dssp             HHHHHHHHHHHHHHTCCTTTCEEEEECCSHHHHHHHHHHHHHTCCEEEEEETTEECCTTSGGGCSSHHHHHHHHTSC-TT
T ss_pred             HHHHHHHHHHHHHhCCCCCCcEEEEECCCHHHHHHHHHHHhCCCCeEEEEECCCcccCCCcccccCHHHHHHHHhhh-cc
Confidence            33444445555555532467889999999999999999999999 89999887    544    2222222221100 01


Q ss_pred             CCHHHHHHhcCCccEEEEcCCCcccHHHHHhccccCCEEEEecCCCCCcccChHHHH
Q 018067          236 RDQDEMQAAMGTMDGIIDTVSAVHPLMPLIGLLKSQGKLVLVGAPEKPLELPAFSLL  292 (361)
Q Consensus       236 ~~~~~~~~~~~g~d~vid~~g~~~~~~~~~~~l~~~G~~v~~g~~~~~~~~~~~~~~  292 (361)
                      .....+.+...++|++|-+++....-...++.|+++.-+..++-+.  .+..+.+.+
T Consensus       252 ~~~~~L~eav~~ADVlIG~Sap~l~t~emVk~Ma~~pIIfalSNPt--~E~~p~~a~  306 (388)
T 1vl6_A          252 RLSGDLETALEGADFFIGVSRGNILKPEWIKKMSRKPVIFALANPV--PEIDPELAR  306 (388)
T ss_dssp             CCCSCHHHHHTTCSEEEECSCSSCSCHHHHTTSCSSCEEEECCSSS--CSSCHHHHH
T ss_pred             CchhhHHHHHccCCEEEEeCCCCccCHHHHHhcCCCCEEEEcCCCC--CCCCHHHHH
Confidence            1223355555678999998874443456777788777665555433  344444433

>1r18_A Protein-L-isoaspartate(D-aspartate)-O-methyltrans; methyltransferase, isomerization, protein repair, S-adenosyl homocysteine; HET: SAH; 2.20A {Drosophila melanogaster} SCOP: c.66.1.7

Probab=96.69  E-value=0.0034  Score=53.44  Aligned_cols=97  Identities=19%  Similarity=0.203  Sum_probs=65.9

Q ss_pred             CCCCCCEEEEEcCChHHHHHHHHHHHcC-------CeEEEEeCCchhHHHHHHHc---C-------CCEEecCCCHHHHH
Q 018067          180 LDKPGMHVGVVGLGGLGHVAVKFAKAMG-------VKVTVISTSPSKKSEAIERL---G-------ADSFLVSRDQDEMQ  242 (361)
Q Consensus       180 ~~~~g~~vlV~Gag~vG~~a~~la~~~g-------~~vi~~~~~~~~~~~~~~~~---g-------~~~vv~~~~~~~~~  242 (361)
                      .++++++||-+|+|. |..++.+++..+       .+|+.++.+++....+.+.+   +       .-.++..+..+.. 
T Consensus        81 ~~~~~~~VLdiG~G~-G~~~~~la~~~~~~~~~~~~~v~~vD~~~~~~~~a~~~~~~~~~~~~~~~~v~~~~~d~~~~~-  158 (227)
T 1r18_A           81 HLKPGARILDVGSGS-GYLTACFYRYIKAKGVDADTRIVGIEHQAELVRRSKANLNTDDRSMLDSGQLLIVEGDGRKGY-  158 (227)
T ss_dssp             TCCTTCEEEEESCTT-SHHHHHHHHHHHHSCCCTTCEEEEEESCHHHHHHHHHHHHHHHHHHHHHTSEEEEESCGGGCC-
T ss_pred             hCCCCCEEEEECCCc-cHHHHHHHHhcccccCCccCEEEEEEcCHHHHHHHHHHHHhcCccccCCCceEEEECCcccCC-
Confidence            468899999999976 888888888766       48999998876654443221   1       1112211111100 


Q ss_pred             HhcCCccEEEEcCCCcccHHHHHhccccCCEEEEec
Q 018067          243 AAMGTMDGIIDTVSAVHPLMPLIGLLKSQGKLVLVG  278 (361)
Q Consensus       243 ~~~~g~d~vid~~g~~~~~~~~~~~l~~~G~~v~~g  278 (361)
                      ...+.+|+|+...........+.+.|+++|+++..-
T Consensus       159 ~~~~~fD~I~~~~~~~~~~~~~~~~LkpgG~lvi~~  194 (227)
T 1r18_A          159 PPNAPYNAIHVGAAAPDTPTELINQLASGGRLIVPV  194 (227)
T ss_dssp             GGGCSEEEEEECSCBSSCCHHHHHTEEEEEEEEEEE
T ss_pred             CcCCCccEEEECCchHHHHHHHHHHhcCCCEEEEEE
Confidence            112479999988877776789999999999988753

>3uxy_A Short-chain dehydrogenase/reductase SDR; structural genomics, PSI-biology, NEW YORK structural genomi research consortium, nysgrc; HET: NAD; 2.10A {Rhodobacter sphaeroides}

Probab=96.69  E-value=0.0022  Score=56.27  Aligned_cols=70  Identities=20%  Similarity=0.273  Sum_probs=49.1

Q ss_pred             CCCEEEEEcC-ChHHHHHHHHHHHcCCeEEEEeCCchhHHHHHHHcCCCEEecCCCHHHHHH-------hcCCccEEEEc
Q 018067          183 PGMHVGVVGL-GGLGHVAVKFAKAMGVKVTVISTSPSKKSEAIERLGADSFLVSRDQDEMQA-------AMGTMDGIIDT  254 (361)
Q Consensus       183 ~g~~vlV~Ga-g~vG~~a~~la~~~g~~vi~~~~~~~~~~~~~~~~g~~~vv~~~~~~~~~~-------~~~g~d~vid~  254 (361)
                      .|+++||.|+ |++|.++++.+...|++|++++++.++.... ..    ...|..+.+.+..       ..+++|++|++
T Consensus        27 ~gk~vlVTGas~gIG~aia~~la~~G~~V~~~~r~~~~~~~~-~~----~~~Dv~~~~~~~~~~~~~~~~~g~iD~lvnn  101 (266)
T 3uxy_A           27 EGKVALVTGAAGGIGGAVVTALRAAGARVAVADRAVAGIAAD-LH----LPGDLREAAYADGLPGAVAAGLGRLDIVVNN  101 (266)
T ss_dssp             TTCEEEESSTTSHHHHHHHHHHHHTTCEEEECSSCCTTSCCS-EE----CCCCTTSHHHHHHHHHHHHHHHSCCCEEEEC
T ss_pred             CCCEEEEeCCCcHHHHHHHHHHHHCCCEEEEEeCCHHHHHhh-hc----cCcCCCCHHHHHHHHHHHHHhcCCCCEEEEC
Confidence            5788999987 9999999999999999999998876543211 00    1123444433322       22589999999


Q ss_pred             CCC
Q 018067          255 VSA  257 (361)
Q Consensus       255 ~g~  257 (361)
                      +|.
T Consensus       102 Ag~  104 (266)
T 3uxy_A          102 AGV  104 (266)
T ss_dssp             CCC
T ss_pred             CCC
Confidence            985

>2nac_A NAD-dependent formate dehydrogenase; oxidoreductase(aldehyde(D),NAD+(A)); 1.80A {Pseudomonas SP} SCOP: c.2.1.4 c.23.12.1 PDB: 2nad_A* 2go1_A 2gug_A* 2gsd_A* 3fn4_A

Probab=96.69  E-value=0.0057  Score=56.62  Aligned_cols=91  Identities=16%  Similarity=0.165  Sum_probs=67.2

Q ss_pred             CCCCEEEEEcCChHHHHHHHHHHHcCCeEEEEeCCchhHHHHHHHcCCCEEecCCCHHHHHHhcCCccEEEEcCCCc---
Q 018067          182 KPGMHVGVVGLGGLGHVAVKFAKAMGVKVTVISTSPSKKSEAIERLGADSFLVSRDQDEMQAAMGTMDGIIDTVSAV---  258 (361)
Q Consensus       182 ~~g~~vlV~Gag~vG~~a~~la~~~g~~vi~~~~~~~~~~~~~~~~g~~~vv~~~~~~~~~~~~~g~d~vid~~g~~---  258 (361)
                      -.|.+|.|+|.|.+|..+++.++.+|.+|++.+++..... ..+.+|+...   .+   +.++....|+|+.++...   
T Consensus       189 l~gktvGIIGlG~IG~~vA~~l~a~G~~V~~~d~~~~~~~-~~~~~G~~~~---~~---l~ell~~aDvV~l~~Plt~~t  261 (393)
T 2nac_A          189 LEAMHVGTVAAGRIGLAVLRRLAPFDVHLHYTDRHRLPES-VEKELNLTWH---AT---REDMYPVCDVVTLNCPLHPET  261 (393)
T ss_dssp             CTTCEEEEECCSHHHHHHHHHHGGGTCEEEEECSSCCCHH-HHHHHTCEEC---SS---HHHHGGGCSEEEECSCCCTTT
T ss_pred             CCCCEEEEEeECHHHHHHHHHHHhCCCEEEEEcCCccchh-hHhhcCceec---CC---HHHHHhcCCEEEEecCCchHH
Confidence            3688999999999999999999999999999988765433 3356676431   11   234555789999887642   


Q ss_pred             -ccH-HHHHhccccCCEEEEecC
Q 018067          259 -HPL-MPLIGLLKSQGKLVLVGA  279 (361)
Q Consensus       259 -~~~-~~~~~~l~~~G~~v~~g~  279 (361)
                       ..+ ...+..|+++..+|.++.
T Consensus       262 ~~li~~~~l~~mk~gailIN~aR  284 (393)
T 2nac_A          262 EHMINDETLKLFKRGAYIVNTAR  284 (393)
T ss_dssp             TTCBSHHHHTTSCTTEEEEECSC
T ss_pred             HHHhhHHHHhhCCCCCEEEECCC
Confidence             112 456788899999998875

>2bd0_A Sepiapterin reductase; oxidoreductase; HET: NAP BIO; 1.70A {Chlorobium tepidum} SCOP: c.2.1.2

Probab=96.69  E-value=0.0059  Score=52.43  Aligned_cols=74  Identities=12%  Similarity=0.133  Sum_probs=53.6

Q ss_pred             CCEEEEEcC-ChHHHHHHHHHHHcCC-------eEEEEeCCchhHHHHHHHc---CCCE---EecCCCHHHHHHh-----
Q 018067          184 GMHVGVVGL-GGLGHVAVKFAKAMGV-------KVTVISTSPSKKSEAIERL---GADS---FLVSRDQDEMQAA-----  244 (361)
Q Consensus       184 g~~vlV~Ga-g~vG~~a~~la~~~g~-------~vi~~~~~~~~~~~~~~~~---g~~~---vv~~~~~~~~~~~-----  244 (361)
                      ++++||.|+ |.+|..++..+...|+       +|++++++.++...+.+++   +...   ..|..+++.+..+     
T Consensus         2 ~k~vlITGasggiG~~la~~l~~~G~~~~~~~~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~D~~~~~~v~~~~~~~~   81 (244)
T 2bd0_A            2 KHILLITGAGKGIGRAIALEFARAARHHPDFEPVLVLSSRTAADLEKISLECRAEGALTDTITADISDMADVRRLTTHIV   81 (244)
T ss_dssp             CEEEEEETTTSHHHHHHHHHHHHHTTTCTTCCEEEEEEESCHHHHHHHHHHHHTTTCEEEEEECCTTSHHHHHHHHHHHH
T ss_pred             CCEEEEECCCChHHHHHHHHHHHhcCcccccceEEEEEeCCHHHHHHHHHHHHccCCeeeEEEecCCCHHHHHHHHHHHH
Confidence            567999997 9999999999888899       9999999887766655443   3321   2345555444332     


Q ss_pred             --cCCccEEEEcCCC
Q 018067          245 --MGTMDGIIDTVSA  257 (361)
Q Consensus       245 --~~g~d~vid~~g~  257 (361)
                        .+++|++|+++|.
T Consensus        82 ~~~g~id~li~~Ag~   96 (244)
T 2bd0_A           82 ERYGHIDCLVNNAGV   96 (244)
T ss_dssp             HHTSCCSEEEECCCC
T ss_pred             HhCCCCCEEEEcCCc
Confidence              2479999999984

>3hem_A Cyclopropane-fatty-acyl-phospholipid synthase 2; protein-ligand complex, cytoplasm, lipid synthesis, methyltransferase; HET: D22; 2.39A {Mycobacterium tuberculosis} SCOP: c.66.1.18 PDB: 1kpi_A*

Probab=96.68  E-value=0.0092  Score=53.16  Aligned_cols=99  Identities=14%  Similarity=0.092  Sum_probs=68.3

Q ss_pred             hcCCCCCCCEEEEEcCChHHHHHHHHHHHcCCeEEEEeCCchhHHHHHHH---cCCC--EEecCCCHHHHHHhcCCccEE
Q 018067          177 FYGLDKPGMHVGVVGLGGLGHVAVKFAKAMGVKVTVISTSPSKKSEAIER---LGAD--SFLVSRDQDEMQAAMGTMDGI  251 (361)
Q Consensus       177 ~~~~~~~g~~vlV~Gag~vG~~a~~la~~~g~~vi~~~~~~~~~~~~~~~---~g~~--~vv~~~~~~~~~~~~~g~d~v  251 (361)
                      ....++++++||-+|+|. |..+..+++..|++|+.++.+++....+.+.   .|..  .-+...+..   .+.+.+|+|
T Consensus        66 ~~~~~~~~~~vLDiGcG~-G~~~~~la~~~~~~v~gvD~s~~~~~~a~~~~~~~~~~~~v~~~~~d~~---~~~~~fD~v  141 (302)
T 3hem_A           66 DKLNLEPGMTLLDIGCGW-GSTMRHAVAEYDVNVIGLTLSENQYAHDKAMFDEVDSPRRKEVRIQGWE---EFDEPVDRI  141 (302)
T ss_dssp             HTTCCCTTCEEEEETCTT-SHHHHHHHHHHCCEEEEEECCHHHHHHHHHHHHHSCCSSCEEEEECCGG---GCCCCCSEE
T ss_pred             HHcCCCCcCEEEEeeccC-cHHHHHHHHhCCCEEEEEECCHHHHHHHHHHHHhcCCCCceEEEECCHH---HcCCCccEE
Confidence            344578999999999985 8888999999899999999988765544332   3432  111122221   225679999


Q ss_pred             EEcCCCc---------------ccHHHHHhccccCCEEEEecC
Q 018067          252 IDTVSAV---------------HPLMPLIGLLKSQGKLVLVGA  279 (361)
Q Consensus       252 id~~g~~---------------~~~~~~~~~l~~~G~~v~~g~  279 (361)
                      +-...-.               ..+..+.+.|+|+|+++....
T Consensus       142 ~~~~~~~~~~d~~~~~~~~~~~~~l~~~~~~LkpgG~l~i~~~  184 (302)
T 3hem_A          142 VSLGAFEHFADGAGDAGFERYDTFFKKFYNLTPDDGRMLLHTI  184 (302)
T ss_dssp             EEESCGGGTTCCSSCCCTTHHHHHHHHHHHSSCTTCEEEEEEE
T ss_pred             EEcchHHhcCccccccchhHHHHHHHHHHHhcCCCcEEEEEEE
Confidence            8753321               346788899999999998754

>2et6_A (3R)-hydroxyacyl-COA dehydrogenase; MFE-2, beta-oxidation, peroxisome, SDR, oxido; 2.22A {Candida tropicalis}

Probab=96.67  E-value=0.0087  Score=58.91  Aligned_cols=98  Identities=19%  Similarity=0.238  Sum_probs=64.0

Q ss_pred             CCCEEEEEcC-ChHHHHHHHHHHHcCCeEEEEeCCc---------hhHHHHHH---HcCCCEEecCCCHH----HHHHh-
Q 018067          183 PGMHVGVVGL-GGLGHVAVKFAKAMGVKVTVISTSP---------SKKSEAIE---RLGADSFLVSRDQD----EMQAA-  244 (361)
Q Consensus       183 ~g~~vlV~Ga-g~vG~~a~~la~~~g~~vi~~~~~~---------~~~~~~~~---~~g~~~vv~~~~~~----~~~~~-  244 (361)
                      .|+++||.|+ +++|.+.+..+...|++|++.++..         ++.+.+.+   ..|...+.|..+.+    .+.++ 
T Consensus         7 ~gkvalVTGas~GIG~a~A~~la~~Ga~Vv~~~~~~~~~~~gr~~~~~~~~~~~i~~~g~~~~~d~~d~~~~~~~v~~~~   86 (604)
T 2et6_A            7 KDKVVIITGAGGGLGKYYSLEFAKLGAKVVVNDLGGALNGQGGNSKAADVVVDEIVKNGGVAVADYNNVLDGDKIVETAV   86 (604)
T ss_dssp             TTCEEEETTTTSHHHHHHHHHHHHTTCEEEEECC-----------CHHHHHHHHHHHTTCEEEEECCCTTCHHHHHHHHH
T ss_pred             CCCEEEEeCCCcHHHHHHHHHHHHcCCEEEEEeCCccccccccchHHHHHHHHHHHhcCCeEEEEcCCHHHHHHHHHHHH
Confidence            5788899997 9999999999999999999987643         33333333   33544455555532    22222 


Q ss_pred             --cCCccEEEEcCCCcc-------------------------cHHHHHhccc--cCCEEEEecCC
Q 018067          245 --MGTMDGIIDTVSAVH-------------------------PLMPLIGLLK--SQGKLVLVGAP  280 (361)
Q Consensus       245 --~~g~d~vid~~g~~~-------------------------~~~~~~~~l~--~~G~~v~~g~~  280 (361)
                        .+++|++|+++|...                         ..+.++..++  .+|++|.+++.
T Consensus        87 ~~~G~iDiLVnNAGi~~~~~~~~~~~~~~~~~~~vNl~g~~~~~~a~~p~m~~~~~G~IVnisS~  151 (604)
T 2et6_A           87 KNFGTVHVIINNAGILRDASMKKMTEKDYKLVIDVHLNGAFAVTKAAWPYFQKQKYGRIVNTSSP  151 (604)
T ss_dssp             HHHSCCCEEEECCCCCCCBCTTTCCHHHHHHHHHHHTHHHHHHHHHHHHHHHHHTCEEEEEECCH
T ss_pred             HHcCCCCEEEECCCCCCCCChhhCCHHHHHHHHHHHhHHHHHHHHHHHHHHHHcCCCEEEEECCH
Confidence              357999999998421                         2233455553  36899999863

>3fbt_A Chorismate mutase and shikimate 5-dehydrogenase fusion protein; structural genomics, oxidoreductase, amino-acid biosynthesis; 2.10A {Clostridium acetobutylicum}

Probab=96.66  E-value=0.0031  Score=55.76  Aligned_cols=100  Identities=17%  Similarity=0.146  Sum_probs=67.0

Q ss_pred             hHhhhcCCCCCCCEEEEEcCChHHHHHHHHHHHcCC-eEEEEeCCchhHHHHHHHcCCCEEecCCCHHHHHHhcCCccEE
Q 018067          173 SPLRFYGLDKPGMHVGVVGLGGLGHVAVKFAKAMGV-KVTVISTSPSKKSEAIERLGADSFLVSRDQDEMQAAMGTMDGI  251 (361)
Q Consensus       173 ~~l~~~~~~~~g~~vlV~Gag~vG~~a~~la~~~g~-~vi~~~~~~~~~~~~~~~~g~~~vv~~~~~~~~~~~~~g~d~v  251 (361)
                      .+|.....--.+++++|+|+|++|.+++..+...|+ +|+++.|+.++.+.+++++.   .+..   +.+.. . .+|+|
T Consensus       111 ~~L~~~~~~~~~k~vlvlGaGGaaraia~~L~~~G~~~v~v~nRt~~ka~~La~~~~---~~~~---~~l~~-l-~~Div  182 (282)
T 3fbt_A          111 KMLSKFRVEIKNNICVVLGSGGAARAVLQYLKDNFAKDIYVVTRNPEKTSEIYGEFK---VISY---DELSN-L-KGDVI  182 (282)
T ss_dssp             HHHHHTTCCCTTSEEEEECSSTTHHHHHHHHHHTTCSEEEEEESCHHHHHHHCTTSE---EEEH---HHHTT-C-CCSEE
T ss_pred             HHHHHcCCCccCCEEEEECCcHHHHHHHHHHHHcCCCEEEEEeCCHHHHHHHHHhcC---cccH---HHHHh-c-cCCEE
Confidence            344443322468999999999999999999999999 89999999887766655442   1221   22222 2 79999


Q ss_pred             EEcCCCccc-----HHHHHhccccCCEEEEecCC
Q 018067          252 IDTVSAVHP-----LMPLIGLLKSQGKLVLVGAP  280 (361)
Q Consensus       252 id~~g~~~~-----~~~~~~~l~~~G~~v~~g~~  280 (361)
                      |++++....     .......++++..++++...
T Consensus       183 InaTp~Gm~~~~~~~pi~~~~l~~~~~v~DlvY~  216 (282)
T 3fbt_A          183 INCTPKGMYPKEGESPVDKEVVAKFSSAVDLIYN  216 (282)
T ss_dssp             EECSSTTSTTSTTCCSSCHHHHTTCSEEEESCCS
T ss_pred             EECCccCccCCCccCCCCHHHcCCCCEEEEEeeC
Confidence            999854210     11234556777777777653

>3s55_A Putative short-chain dehydrogenase/reductase; structural genomics, seattle structural genomics center for infectious disease, ssgcid; HET: NAD; 2.10A {Mycobacterium abscessus} SCOP: c.2.1.0

Probab=96.65  E-value=0.012  Score=51.89  Aligned_cols=75  Identities=16%  Similarity=0.293  Sum_probs=52.7

Q ss_pred             CCCEEEEEcC-ChHHHHHHHHHHHcCCeEEEEeCC------------chhHHHH---HHHcCCCE---EecCCCHHHHHH
Q 018067          183 PGMHVGVVGL-GGLGHVAVKFAKAMGVKVTVISTS------------PSKKSEA---IERLGADS---FLVSRDQDEMQA  243 (361)
Q Consensus       183 ~g~~vlV~Ga-g~vG~~a~~la~~~g~~vi~~~~~------------~~~~~~~---~~~~g~~~---vv~~~~~~~~~~  243 (361)
                      .|+++||.|+ |++|.++++.+...|++|++++++            .++....   .+..+...   ..|-.+++.+.+
T Consensus         9 ~~k~~lVTGas~gIG~a~a~~l~~~G~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~Dv~~~~~v~~   88 (281)
T 3s55_A            9 EGKTALITGGARGMGRSHAVALAEAGADIAICDRCENSDVVGYPLATADDLAETVALVEKTGRRCISAKVDVKDRAALES   88 (281)
T ss_dssp             TTCEEEEETTTSHHHHHHHHHHHHTTCEEEEEECCSCCTTCSSCCCCHHHHHHHHHHHHHTTCCEEEEECCTTCHHHHHH
T ss_pred             CCCEEEEeCCCchHHHHHHHHHHHCCCeEEEEeCCccccccccccccHHHHHHHHHHHHhcCCeEEEEeCCCCCHHHHHH
Confidence            5789999997 999999999999999999999986            2333222   23344432   235555544333


Q ss_pred             h-------cCCccEEEEcCCC
Q 018067          244 A-------MGTMDGIIDTVSA  257 (361)
Q Consensus       244 ~-------~~g~d~vid~~g~  257 (361)
                      +       .+++|++|+++|.
T Consensus        89 ~~~~~~~~~g~id~lv~nAg~  109 (281)
T 3s55_A           89 FVAEAEDTLGGIDIAITNAGI  109 (281)
T ss_dssp             HHHHHHHHHTCCCEEEECCCC
T ss_pred             HHHHHHHhcCCCCEEEECCCC
Confidence            2       2489999999984

>3uf0_A Short-chain dehydrogenase/reductase SDR; gluconate, gluconate 5-dehydratase, NAD(P) dependent, enzyme initiative, EFI, oxidoreductase; HET: NAP; 2.00A {Beutenbergia cavernae} SCOP: c.2.1.0

Probab=96.65  E-value=0.0076  Score=52.98  Aligned_cols=74  Identities=15%  Similarity=0.211  Sum_probs=52.0

Q ss_pred             CCCEEEEEcC-ChHHHHHHHHHHHcCCeEEEEeCCchhHHHHHHHc---CCC---EEecCCCHHHHHHhc------CCcc
Q 018067          183 PGMHVGVVGL-GGLGHVAVKFAKAMGVKVTVISTSPSKKSEAIERL---GAD---SFLVSRDQDEMQAAM------GTMD  249 (361)
Q Consensus       183 ~g~~vlV~Ga-g~vG~~a~~la~~~g~~vi~~~~~~~~~~~~~~~~---g~~---~vv~~~~~~~~~~~~------~g~d  249 (361)
                      .|+++||.|+ |++|.++++.+...|++|+++++.+ +..+..+++   +..   ...|..+.+.+.++.      +++|
T Consensus        30 ~gk~~lVTGas~GIG~aia~~la~~G~~V~~~~r~~-~~~~~~~~~~~~~~~~~~~~~Dv~d~~~v~~~~~~~~~~g~iD  108 (273)
T 3uf0_A           30 AGRTAVVTGAGSGIGRAIAHGYARAGAHVLAWGRTD-GVKEVADEIADGGGSAEAVVADLADLEGAANVAEELAATRRVD  108 (273)
T ss_dssp             TTCEEEEETTTSHHHHHHHHHHHHTTCEEEEEESST-HHHHHHHHHHTTTCEEEEEECCTTCHHHHHHHHHHHHHHSCCC
T ss_pred             CCCEEEEeCCCcHHHHHHHHHHHHCCCEEEEEcCHH-HHHHHHHHHHhcCCcEEEEEecCCCHHHHHHHHHHHHhcCCCc
Confidence            5789999997 9999999999999999999998654 333443333   322   123555554433322      4799


Q ss_pred             EEEEcCCC
Q 018067          250 GIIDTVSA  257 (361)
Q Consensus       250 ~vid~~g~  257 (361)
                      ++|+++|.
T Consensus       109 ~lv~nAg~  116 (273)
T 3uf0_A          109 VLVNNAGI  116 (273)
T ss_dssp             EEEECCCC
T ss_pred             EEEECCCC
Confidence            99999985

>2hk9_A Shikimate dehydrogenase; shikimate pathway, drug design, oxidoreductase; HET: ATR SKM NAP; 2.20A {Aquifex aeolicus} PDB: 2hk8_A 2hk7_A

Probab=96.64  E-value=0.0028  Score=55.88  Aligned_cols=92  Identities=15%  Similarity=0.120  Sum_probs=65.6

Q ss_pred             CCCCEEEEEcCChHHHHHHHHHHHcCCeEEEEeCCchhHHHHHHHcCCCEEecCCCHHHHHHhcCCccEEEEcCCCcccH
Q 018067          182 KPGMHVGVVGLGGLGHVAVKFAKAMGVKVTVISTSPSKKSEAIERLGADSFLVSRDQDEMQAAMGTMDGIIDTVSAVHPL  261 (361)
Q Consensus       182 ~~g~~vlV~Gag~vG~~a~~la~~~g~~vi~~~~~~~~~~~~~~~~g~~~vv~~~~~~~~~~~~~g~d~vid~~g~~~~~  261 (361)
                      -.+.+++|+|+|.+|.+++..+...|++|++.+++.++.+.+++++|+. +.+  +   ..+....+|+||.+++.....
T Consensus       127 ~~~~~v~iiGaG~~g~aia~~L~~~g~~V~v~~r~~~~~~~l~~~~g~~-~~~--~---~~~~~~~aDiVi~atp~~~~~  200 (275)
T 2hk9_A          127 VKEKSILVLGAGGASRAVIYALVKEGAKVFLWNRTKEKAIKLAQKFPLE-VVN--S---PEEVIDKVQVIVNTTSVGLKD  200 (275)
T ss_dssp             GGGSEEEEECCSHHHHHHHHHHHHHTCEEEEECSSHHHHHHHTTTSCEE-ECS--C---GGGTGGGCSEEEECSSTTSST
T ss_pred             cCCCEEEEECchHHHHHHHHHHHHcCCEEEEEECCHHHHHHHHHHcCCe-eeh--h---HHhhhcCCCEEEEeCCCCCCC
Confidence            3578999999999999999999988999999999888777776666642 111  1   122334799999999865310


Q ss_pred             ---H-HHHhccccCCEEEEecC
Q 018067          262 ---M-PLIGLLKSQGKLVLVGA  279 (361)
Q Consensus       262 ---~-~~~~~l~~~G~~v~~g~  279 (361)
                         . .....++++..++.++.
T Consensus       201 ~~~~~i~~~~l~~g~~viDv~~  222 (275)
T 2hk9_A          201 EDPEIFNYDLIKKDHVVVDIIY  222 (275)
T ss_dssp             TCCCSSCGGGCCTTSEEEESSS
T ss_pred             CCCCCCCHHHcCCCCEEEEcCC
Confidence               0 11345677777878766

>3tl3_A Short-chain type dehydrogenase/reductase; ssgcid, seattle structural genomics center for infectious DI oxidoreductase; 1.85A {Mycobacterium ulcerans}

Probab=96.63  E-value=0.0027  Score=55.22  Aligned_cols=72  Identities=22%  Similarity=0.304  Sum_probs=51.3

Q ss_pred             CCCEEEEEcC-ChHHHHHHHHHHHcCCeEEEEeCCchhHHHHHHHcCCCE---EecCCCHHHHHHh------cCCccEEE
Q 018067          183 PGMHVGVVGL-GGLGHVAVKFAKAMGVKVTVISTSPSKKSEAIERLGADS---FLVSRDQDEMQAA------MGTMDGII  252 (361)
Q Consensus       183 ~g~~vlV~Ga-g~vG~~a~~la~~~g~~vi~~~~~~~~~~~~~~~~g~~~---vv~~~~~~~~~~~------~~g~d~vi  252 (361)
                      .++++||.|+ +++|.++++.+...|++|+++++..++   ..++++...   ..|..+++.+..+      .+++|++|
T Consensus         8 ~~k~vlVTGas~gIG~aia~~l~~~G~~V~~~~r~~~~---~~~~~~~~~~~~~~D~~~~~~v~~~~~~~~~~g~id~lv   84 (257)
T 3tl3_A            8 RDAVAVVTGGASGLGLATTKRLLDAGAQVVVLDIRGED---VVADLGDRARFAAADVTDEAAVASALDLAETMGTLRIVV   84 (257)
T ss_dssp             --CEEEEETTTSHHHHHHHHHHHHHTCEEEEEESSCHH---HHHHTCTTEEEEECCTTCHHHHHHHHHHHHHHSCEEEEE
T ss_pred             cCCEEEEeCCCCHHHHHHHHHHHHCCCEEEEEeCchHH---HHHhcCCceEEEECCCCCHHHHHHHHHHHHHhCCCCEEE
Confidence            4688999997 999999999999999999999986543   334555432   2355555444333      24899999


Q ss_pred             EcCCC
Q 018067          253 DTVSA  257 (361)
Q Consensus       253 d~~g~  257 (361)
                      +++|.
T Consensus        85 ~nAg~   89 (257)
T 3tl3_A           85 NCAGT   89 (257)
T ss_dssp             ECGGG
T ss_pred             ECCCC
Confidence            99984

>2gpy_A O-methyltransferase; structural genomics, PSI, protein structure initiative, NEW research center for structural genomics, nysgxrc; HET: MSE; 1.90A {Bacillus halodurans}

Probab=96.62  E-value=0.0062  Score=52.03  Aligned_cols=97  Identities=14%  Similarity=0.153  Sum_probs=66.1

Q ss_pred             CCCCCEEEEEcCChHHHHHHHHHHHc-CCeEEEEeCCchhHHHHHHH---cCCC--EEecCCC-HHHHHHh--cCCccEE
Q 018067          181 DKPGMHVGVVGLGGLGHVAVKFAKAM-GVKVTVISTSPSKKSEAIER---LGAD--SFLVSRD-QDEMQAA--MGTMDGI  251 (361)
Q Consensus       181 ~~~g~~vlV~Gag~vG~~a~~la~~~-g~~vi~~~~~~~~~~~~~~~---~g~~--~vv~~~~-~~~~~~~--~~g~d~v  251 (361)
                      ..++++||-+|+| .|..+..+++.. +.+|+.++.+++....+.+.   .|..  ..+...+ .+.+...  .+.+|+|
T Consensus        52 ~~~~~~vLdiG~G-~G~~~~~la~~~~~~~v~~vD~~~~~~~~a~~~~~~~~~~~~v~~~~~d~~~~~~~~~~~~~fD~I  130 (233)
T 2gpy_A           52 MAAPARILEIGTA-IGYSAIRMAQALPEATIVSIERDERRYEEAHKHVKALGLESRIELLFGDALQLGEKLELYPLFDVL  130 (233)
T ss_dssp             HHCCSEEEEECCT-TSHHHHHHHHHCTTCEEEEECCCHHHHHHHHHHHHHTTCTTTEEEECSCGGGSHHHHTTSCCEEEE
T ss_pred             ccCCCEEEEecCC-CcHHHHHHHHHCCCCEEEEEECCHHHHHHHHHHHHHcCCCCcEEEEECCHHHHHHhcccCCCccEE
Confidence            3578899999998 688888999987 67999999888765544332   3432  2222222 2333444  4579999


Q ss_pred             EEcCCC---cccHHHHHhccccCCEEEEec
Q 018067          252 IDTVSA---VHPLMPLIGLLKSQGKLVLVG  278 (361)
Q Consensus       252 id~~g~---~~~~~~~~~~l~~~G~~v~~g  278 (361)
                      +.....   ...+..+.+.|+++|.++...
T Consensus       131 ~~~~~~~~~~~~l~~~~~~L~pgG~lv~~~  160 (233)
T 2gpy_A          131 FIDAAKGQYRRFFDMYSPMVRPGGLILSDN  160 (233)
T ss_dssp             EEEGGGSCHHHHHHHHGGGEEEEEEEEEET
T ss_pred             EECCCHHHHHHHHHHHHHHcCCCeEEEEEc
Confidence            876553   234677889999999998863

>3gg9_A D-3-phosphoglycerate dehydrogenase oxidoreductase; structural genomics, PSI-2, P structure initiative; 1.90A {Ralstonia solanacearum}

Probab=96.61  E-value=0.0055  Score=55.98  Aligned_cols=89  Identities=19%  Similarity=0.256  Sum_probs=65.0

Q ss_pred             CCCEEEEEcCChHHHHHHHHHHHcCCeEEEEeCCchhHHHHHHHcCCCEEecCCCHHHHHHhcCCccEEEEcCCCcc---
Q 018067          183 PGMHVGVVGLGGLGHVAVKFAKAMGVKVTVISTSPSKKSEAIERLGADSFLVSRDQDEMQAAMGTMDGIIDTVSAVH---  259 (361)
Q Consensus       183 ~g~~vlV~Gag~vG~~a~~la~~~g~~vi~~~~~~~~~~~~~~~~g~~~vv~~~~~~~~~~~~~g~d~vid~~g~~~---  259 (361)
                      .|++|.|+|.|.+|..+++.++.+|++|++.+++...  ......|+..+   .+   +.++....|+|+-++....   
T Consensus       159 ~g~tvGIIGlG~IG~~vA~~l~~~G~~V~~~d~~~~~--~~~~~~g~~~~---~~---l~ell~~aDiV~l~~Plt~~t~  230 (352)
T 3gg9_A          159 KGQTLGIFGYGKIGQLVAGYGRAFGMNVLVWGRENSK--ERARADGFAVA---ES---KDALFEQSDVLSVHLRLNDETR  230 (352)
T ss_dssp             TTCEEEEECCSHHHHHHHHHHHHTTCEEEEECSHHHH--HHHHHTTCEEC---SS---HHHHHHHCSEEEECCCCSTTTT
T ss_pred             CCCEEEEEeECHHHHHHHHHHHhCCCEEEEECCCCCH--HHHHhcCceEe---CC---HHHHHhhCCEEEEeccCcHHHH
Confidence            5889999999999999999999999999998876432  33346676421   12   2233345899998875321   


Q ss_pred             --cHHHHHhccccCCEEEEecC
Q 018067          260 --PLMPLIGLLKSQGKLVLVGA  279 (361)
Q Consensus       260 --~~~~~~~~l~~~G~~v~~g~  279 (361)
                        .-...+..++++..+|.++.
T Consensus       231 ~li~~~~l~~mk~gailIN~aR  252 (352)
T 3gg9_A          231 SIITVADLTRMKPTALFVNTSR  252 (352)
T ss_dssp             TCBCHHHHTTSCTTCEEEECSC
T ss_pred             HhhCHHHHhhCCCCcEEEECCC
Confidence              12467788999999999984

>1gdh_A D-glycerate dehydrogenase; oxidoreductase(CHOH (D)-NAD(P)+ (A)); 2.40A {Hyphomicrobium methylovorum} SCOP: c.2.1.4 c.23.12.1

Probab=96.61  E-value=0.0058  Score=55.11  Aligned_cols=90  Identities=14%  Similarity=0.154  Sum_probs=66.2

Q ss_pred             CCCCEEEEEcCChHHHHHHHHHHHcCCeEEEEeC-CchhHHHHHHHcCCCEEecCCCHHHHHHhcCCccEEEEcCCCcc-
Q 018067          182 KPGMHVGVVGLGGLGHVAVKFAKAMGVKVTVIST-SPSKKSEAIERLGADSFLVSRDQDEMQAAMGTMDGIIDTVSAVH-  259 (361)
Q Consensus       182 ~~g~~vlV~Gag~vG~~a~~la~~~g~~vi~~~~-~~~~~~~~~~~~g~~~vv~~~~~~~~~~~~~g~d~vid~~g~~~-  259 (361)
                      -.|.+|.|+|.|.+|...++.++.+|++|++.++ +.++ . ..+++|+.. .  .+   ..++....|+|+.++.... 
T Consensus       144 l~g~~vgIIG~G~IG~~~A~~l~~~G~~V~~~d~~~~~~-~-~~~~~g~~~-~--~~---l~ell~~aDvVil~~p~~~~  215 (320)
T 1gdh_A          144 LDNKTLGIYGFGSIGQALAKRAQGFDMDIDYFDTHRASS-S-DEASYQATF-H--DS---LDSLLSVSQFFSLNAPSTPE  215 (320)
T ss_dssp             CTTCEEEEECCSHHHHHHHHHHHTTTCEEEEECSSCCCH-H-HHHHHTCEE-C--SS---HHHHHHHCSEEEECCCCCTT
T ss_pred             CCCCEEEEECcCHHHHHHHHHHHHCCCEEEEECCCCcCh-h-hhhhcCcEE-c--CC---HHHHHhhCCEEEEeccCchH
Confidence            4688999999999999999999999999999998 7655 2 335667642 1  12   2233346899999887431 


Q ss_pred             ---cH-HHHHhccccCCEEEEecC
Q 018067          260 ---PL-MPLIGLLKSQGKLVLVGA  279 (361)
Q Consensus       260 ---~~-~~~~~~l~~~G~~v~~g~  279 (361)
                         .+ ...+..++++..++.++.
T Consensus       216 t~~~i~~~~l~~mk~gailIn~ar  239 (320)
T 1gdh_A          216 TRYFFNKATIKSLPQGAIVVNTAR  239 (320)
T ss_dssp             TTTCBSHHHHTTSCTTEEEEECSC
T ss_pred             HHhhcCHHHHhhCCCCcEEEECCC
Confidence               12 346788899999999876

>1gz6_A Estradiol 17 beta-dehydrogenase 4; 17BETA-HSD4, MFE-2, beta-oxidation, peroxisome, SDR, steroid biosynthesis, oxidoreductase, NADP; HET: NAI; 2.38A {Rattus norvegicus} SCOP: c.2.1.2 PDB: 1zbq_A*

Probab=96.60  E-value=0.0078  Score=54.28  Aligned_cols=75  Identities=21%  Similarity=0.287  Sum_probs=52.2

Q ss_pred             CCCEEEEEcC-ChHHHHHHHHHHHcCCeEEEEeC---------CchhHHHHHHH---cCCCEEecCCCHHHHHH------
Q 018067          183 PGMHVGVVGL-GGLGHVAVKFAKAMGVKVTVIST---------SPSKKSEAIER---LGADSFLVSRDQDEMQA------  243 (361)
Q Consensus       183 ~g~~vlV~Ga-g~vG~~a~~la~~~g~~vi~~~~---------~~~~~~~~~~~---~g~~~vv~~~~~~~~~~------  243 (361)
                      .|+++||.|+ |++|..+++.+...|++|+++++         +.++...+.++   .+...+.|..+.+.+.+      
T Consensus         8 ~gk~~lVTGas~GIG~~~a~~La~~Ga~Vv~~~~~~~~~~~~R~~~~~~~~~~~l~~~~~~~~~D~~~~~~~~~~~~~~~   87 (319)
T 1gz6_A            8 DGRVVLVTGAGGGLGRAYALAFAERGALVVVNDLGGDFKGVGKGSSAADKVVEEIRRRGGKAVANYDSVEAGEKLVKTAL   87 (319)
T ss_dssp             TTCEEEETTTTSHHHHHHHHHHHHTTCEEEEECCCBCTTSCBCCSHHHHHHHHHHHHTTCEEEEECCCGGGHHHHHHHHH
T ss_pred             CCCEEEEeCCCcHHHHHHHHHHHHCCCEEEEEcCCcccccccCCHHHHHHHHHHHHhhCCeEEEeCCCHHHHHHHHHHHH
Confidence            5788999997 99999999999999999998643         44444443333   34444556666443222      


Q ss_pred             -hcCCccEEEEcCCC
Q 018067          244 -AMGTMDGIIDTVSA  257 (361)
Q Consensus       244 -~~~g~d~vid~~g~  257 (361)
                       ..+++|++|+++|.
T Consensus        88 ~~~g~iD~lVnnAG~  102 (319)
T 1gz6_A           88 DTFGRIDVVVNNAGI  102 (319)
T ss_dssp             HHTSCCCEEEECCCC
T ss_pred             HHcCCCCEEEECCCC
Confidence             23579999999984

>3t7c_A Carveol dehydrogenase; structural genomics, seattle structural genomics center for infectious disease, ssgcid; HET: NAD; 1.95A {Mycobacterium avium}

Probab=96.60  E-value=0.006  Score=54.42  Aligned_cols=76  Identities=26%  Similarity=0.363  Sum_probs=53.4

Q ss_pred             CCCCEEEEEcC-ChHHHHHHHHHHHcCCeEEEEeCC------------chhHHHHH---HHcCCCE---EecCCCHHHHH
Q 018067          182 KPGMHVGVVGL-GGLGHVAVKFAKAMGVKVTVISTS------------PSKKSEAI---ERLGADS---FLVSRDQDEMQ  242 (361)
Q Consensus       182 ~~g~~vlV~Ga-g~vG~~a~~la~~~g~~vi~~~~~------------~~~~~~~~---~~~g~~~---vv~~~~~~~~~  242 (361)
                      -.|+++||.|+ +++|.++++.+...|++|++++++            .++..+..   +..+...   ..|..+++.+.
T Consensus        26 l~gk~~lVTGas~GIG~aia~~la~~G~~V~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~Dv~~~~~v~  105 (299)
T 3t7c_A           26 VEGKVAFITGAARGQGRSHAITLAREGADIIAIDVCKQLDGVKLPMSTPDDLAETVRQVEALGRRIIASQVDVRDFDAMQ  105 (299)
T ss_dssp             TTTCEEEEESTTSHHHHHHHHHHHHTTCEEEEEECCSCCTTCCSCCCCHHHHHHHHHHHHHTTCCEEEEECCTTCHHHHH
T ss_pred             cCCCEEEEECCCCHHHHHHHHHHHHCCCEEEEEecccccccccccccCHHHHHHHHHHHHhcCCceEEEECCCCCHHHHH
Confidence            35789999997 999999999999999999999876            33333332   2344432   23555555443


Q ss_pred             Hh-------cCCccEEEEcCCC
Q 018067          243 AA-------MGTMDGIIDTVSA  257 (361)
Q Consensus       243 ~~-------~~g~d~vid~~g~  257 (361)
                      ++       .+++|++|+++|.
T Consensus       106 ~~~~~~~~~~g~iD~lv~nAg~  127 (299)
T 3t7c_A          106 AAVDDGVTQLGRLDIVLANAAL  127 (299)
T ss_dssp             HHHHHHHHHHSCCCEEEECCCC
T ss_pred             HHHHHHHHHhCCCCEEEECCCC
Confidence            32       2479999999984

>1yo6_A Putative carbonyl reductase sniffer; tyrosine-dependent oxidoreductase (SDR family), structural genomics, PSI; 2.60A {Caenorhabditis elegans} SCOP: c.2.1.2

Probab=96.58  E-value=0.0057  Score=52.56  Aligned_cols=73  Identities=15%  Similarity=0.150  Sum_probs=53.1

Q ss_pred             CCEEEEEcC-ChHHHHHHHHHHHcC--CeEEEEeCCchhHHHHHHHc-CCC---EEecCCCHHHHHHhc-------C--C
Q 018067          184 GMHVGVVGL-GGLGHVAVKFAKAMG--VKVTVISTSPSKKSEAIERL-GAD---SFLVSRDQDEMQAAM-------G--T  247 (361)
Q Consensus       184 g~~vlV~Ga-g~vG~~a~~la~~~g--~~vi~~~~~~~~~~~~~~~~-g~~---~vv~~~~~~~~~~~~-------~--g  247 (361)
                      ++++||.|+ |.+|..+++.+...|  ++|++++++.++...+ +++ +..   ...|..+++.+.++.       +  +
T Consensus         3 ~k~vlItGasggiG~~la~~l~~~g~~~~V~~~~r~~~~~~~l-~~~~~~~~~~~~~D~~~~~~~~~~~~~~~~~~g~~~   81 (250)
T 1yo6_A            3 PGSVVVTGANRGIGLGLVQQLVKDKNIRHIIATARDVEKATEL-KSIKDSRVHVLPLTVTCDKSLDTFVSKVGEIVGSDG   81 (250)
T ss_dssp             CSEEEESSCSSHHHHHHHHHHHTCTTCCEEEEEESSGGGCHHH-HTCCCTTEEEEECCTTCHHHHHHHHHHHHHHHGGGC
T ss_pred             CCEEEEecCCchHHHHHHHHHHhcCCCcEEEEEecCHHHHHHH-HhccCCceEEEEeecCCHHHHHHHHHHHHHhcCCCC
Confidence            578999987 999999999999999  9999999988776655 333 222   123455554443332       2  7


Q ss_pred             ccEEEEcCCC
Q 018067          248 MDGIIDTVSA  257 (361)
Q Consensus       248 ~d~vid~~g~  257 (361)
                      +|++|+++|.
T Consensus        82 id~li~~Ag~   91 (250)
T 1yo6_A           82 LSLLINNAGV   91 (250)
T ss_dssp             CCEEEECCCC
T ss_pred             CcEEEECCcc
Confidence            9999999974

>3don_A Shikimate dehydrogenase; alpha-beta structure, rossman fold, amino-acid biosynthesis, amino acid biosynthesis, NADP, oxidoreductase; 2.10A {Staphylococcus epidermidis} PDB: 3doo_A*

Probab=96.56  E-value=0.0012  Score=58.24  Aligned_cols=101  Identities=14%  Similarity=0.021  Sum_probs=64.9

Q ss_pred             HhhhcCCCCCCCEEEEEcCChHHHHHHHHHHHcCC-eEEEEeCCchhHHHHHHHcCCCEEecCCCHHHHHHhcCCccEEE
Q 018067          174 PLRFYGLDKPGMHVGVVGLGGLGHVAVKFAKAMGV-KVTVISTSPSKKSEAIERLGADSFLVSRDQDEMQAAMGTMDGII  252 (361)
Q Consensus       174 ~l~~~~~~~~g~~vlV~Gag~vG~~a~~la~~~g~-~vi~~~~~~~~~~~~~~~~g~~~vv~~~~~~~~~~~~~g~d~vi  252 (361)
                      +++....--.+++++|+|+|++|.+++..+...|+ +|+++.++.++...+++.  .. .+   ..+...+....+|+||
T Consensus       107 ~L~~~~~~l~~k~vlvlGaGg~g~aia~~L~~~G~~~v~v~~R~~~~a~~la~~--~~-~~---~~~~~~~~~~~aDiVI  180 (277)
T 3don_A          107 GLKQIYEGIEDAYILILGAGGASKGIANELYKIVRPTLTVANRTMSRFNNWSLN--IN-KI---NLSHAESHLDEFDIII  180 (277)
T ss_dssp             HHHHHSTTGGGCCEEEECCSHHHHHHHHHHHTTCCSCCEEECSCGGGGTTCCSC--CE-EE---CHHHHHHTGGGCSEEE
T ss_pred             HHHHhCCCcCCCEEEEECCcHHHHHHHHHHHHCCCCEEEEEeCCHHHHHHHHHh--cc-cc---cHhhHHHHhcCCCEEE
Confidence            34443322367889999999999999999999999 899999988765444321  11 11   2233444456799999


Q ss_pred             EcCCCcccHH----HHHhccccCCEEEEecCC
Q 018067          253 DTVSAVHPLM----PLIGLLKSQGKLVLVGAP  280 (361)
Q Consensus       253 d~~g~~~~~~----~~~~~l~~~G~~v~~g~~  280 (361)
                      ++++....-.    .....++++..++++...
T Consensus       181 naTp~Gm~~~~~~~l~~~~l~~~~~V~D~vY~  212 (277)
T 3don_A          181 NTTPAGMNGNTDSVISLNRLASHTLVSDIVYN  212 (277)
T ss_dssp             ECCC-------CCSSCCTTCCSSCEEEESCCS
T ss_pred             ECccCCCCCCCcCCCCHHHcCCCCEEEEecCC
Confidence            9987532000    123456777777887654

>1h5q_A NADP-dependent mannitol dehydrogenase; oxidoreductase, mannitol metabolism; HET: NAP; 1.50A {Agaricus bisporus} SCOP: c.2.1.2

Probab=96.55  E-value=0.0063  Score=52.88  Aligned_cols=75  Identities=23%  Similarity=0.337  Sum_probs=52.3

Q ss_pred             CCCEEEEEcC-ChHHHHHHHHHHHcCCeEEEEeCCchhHHHHHH----HcCCCE---EecCCCHHHHHHh-------cCC
Q 018067          183 PGMHVGVVGL-GGLGHVAVKFAKAMGVKVTVISTSPSKKSEAIE----RLGADS---FLVSRDQDEMQAA-------MGT  247 (361)
Q Consensus       183 ~g~~vlV~Ga-g~vG~~a~~la~~~g~~vi~~~~~~~~~~~~~~----~~g~~~---vv~~~~~~~~~~~-------~~g  247 (361)
                      .++++||.|+ |.+|..++..+...|++|++++++.++.....+    +.+...   ..|..+++.+..+       .++
T Consensus        13 ~~k~vlITGasggiG~~~a~~l~~~G~~V~~~~r~~~~~~~~~~~l~~~~~~~~~~~~~Dl~~~~~~~~~~~~~~~~~~~   92 (265)
T 1h5q_A           13 VNKTIIVTGGNRGIGLAFTRAVAAAGANVAVIYRSAADAVEVTEKVGKEFGVKTKAYQCDVSNTDIVTKTIQQIDADLGP   92 (265)
T ss_dssp             TTEEEEEETTTSHHHHHHHHHHHHTTEEEEEEESSCTTHHHHHHHHHHHHTCCEEEEECCTTCHHHHHHHHHHHHHHSCS
T ss_pred             CCCEEEEECCCchHHHHHHHHHHHCCCeEEEEeCcchhhHHHHHHHHHhcCCeeEEEEeeCCCHHHHHHHHHHHHHhcCC
Confidence            4678999998 999999999999999999999986554333222    234332   2355555443332       246


Q ss_pred             ccEEEEcCCC
Q 018067          248 MDGIIDTVSA  257 (361)
Q Consensus       248 ~d~vid~~g~  257 (361)
                      +|++|+++|.
T Consensus        93 id~li~~Ag~  102 (265)
T 1h5q_A           93 ISGLIANAGV  102 (265)
T ss_dssp             EEEEEECCCC
T ss_pred             CCEEEECCCc
Confidence            9999999985

>3osu_A 3-oxoacyl-[acyl-carrier-protein] reductase; structural genomics, csgid, center for structural genomics O infectious diseases; 1.90A {Staphylococcus aureus subsp} SCOP: c.2.1.0 PDB: 3sj7_A*

Probab=96.55  E-value=0.0057  Score=52.81  Aligned_cols=75  Identities=24%  Similarity=0.306  Sum_probs=51.9

Q ss_pred             CCCEEEEEcC-ChHHHHHHHHHHHcCCeEEEEeCCc-hhHHHHHH---HcCCCE---EecCCCHHHHHHh-------cCC
Q 018067          183 PGMHVGVVGL-GGLGHVAVKFAKAMGVKVTVISTSP-SKKSEAIE---RLGADS---FLVSRDQDEMQAA-------MGT  247 (361)
Q Consensus       183 ~g~~vlV~Ga-g~vG~~a~~la~~~g~~vi~~~~~~-~~~~~~~~---~~g~~~---vv~~~~~~~~~~~-------~~g  247 (361)
                      .++++||.|+ |++|.+++..+...|++|+++++.. ++.+.+.+   ..+.+.   ..|-.+.+.+.++       .++
T Consensus         3 ~~k~~lVTGas~gIG~~ia~~l~~~G~~V~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~Dv~d~~~v~~~~~~~~~~~g~   82 (246)
T 3osu_A            3 MTKSALVTGASRGIGRSIALQLAEEGYNVAVNYAGSKEKAEAVVEEIKAKGVDSFAIQANVADADEVKAMIKEVVSQFGS   82 (246)
T ss_dssp             CSCEEEETTCSSHHHHHHHHHHHHTTCEEEEEESSCHHHHHHHHHHHHHTTSCEEEEECCTTCHHHHHHHHHHHHHHHSC
T ss_pred             CCCEEEEECCCChHHHHHHHHHHHCCCEEEEEeCCCHHHHHHHHHHHHhcCCcEEEEEccCCCHHHHHHHHHHHHHHcCC
Confidence            4678999987 9999999999999999999887744 44443333   334432   2345555444332       248


Q ss_pred             ccEEEEcCCC
Q 018067          248 MDGIIDTVSA  257 (361)
Q Consensus       248 ~d~vid~~g~  257 (361)
                      +|++|+++|.
T Consensus        83 id~lv~nAg~   92 (246)
T 3osu_A           83 LDVLVNNAGI   92 (246)
T ss_dssp             CCEEEECCCC
T ss_pred             CCEEEECCCC
Confidence            9999999985

>2glx_A 1,5-anhydro-D-fructose reductase; NADP(H) dependent reductase, rossmann-fold, sugar metabolism, 1,5-anhydro-D-mannitol, oxidoreductase; HET: NDP; 2.20A {Ensifer adhaerens}

Probab=96.53  E-value=0.042  Score=49.53  Aligned_cols=129  Identities=16%  Similarity=0.192  Sum_probs=75.4

Q ss_pred             EEEEEcCChHHHHH-HHHHHHcCCeEEEE-eCCchhHHHHHHHcCCCEEecCCCHHHHHHhc-CCccEEEEcCCCcccHH
Q 018067          186 HVGVVGLGGLGHVA-VKFAKAMGVKVTVI-STSPSKKSEAIERLGADSFLVSRDQDEMQAAM-GTMDGIIDTVSAVHPLM  262 (361)
Q Consensus       186 ~vlV~Gag~vG~~a-~~la~~~g~~vi~~-~~~~~~~~~~~~~~g~~~vv~~~~~~~~~~~~-~g~d~vid~~g~~~~~~  262 (361)
                      +|.|+|+|.+|... +..++..+.+++.+ +++.++...+++++|...+  +.+.+.  -+. ..+|+|+.++....-..
T Consensus         2 ~vgiiG~G~~g~~~~~~~l~~~~~~~vav~d~~~~~~~~~~~~~g~~~~--~~~~~~--~l~~~~~D~V~i~tp~~~h~~   77 (332)
T 2glx_A            2 RWGLIGASTIAREWVIGAIRATGGEVVSMMSTSAERGAAYATENGIGKS--VTSVEE--LVGDPDVDAVYVSTTNELHRE   77 (332)
T ss_dssp             EEEEESCCHHHHHTHHHHHHHTTCEEEEEECSCHHHHHHHHHHTTCSCC--BSCHHH--HHTCTTCCEEEECSCGGGHHH
T ss_pred             eEEEEcccHHHHHhhhHHhhcCCCeEEEEECCCHHHHHHHHHHcCCCcc--cCCHHH--HhcCCCCCEEEEeCChhHhHH
Confidence            58899999999876 64444477887654 5566666677778886422  223221  122 36999999998765456


Q ss_pred             HHHhccccCCEEEEecCCCCCcccChHH---H---H-hCCcEE-EecccCCHHHHHHHHHHHHcCCCc
Q 018067          263 PLIGLLKSQGKLVLVGAPEKPLELPAFS---L---L-MGRKIV-GGSMIGGMKETQEMIDFAAKHNIR  322 (361)
Q Consensus       263 ~~~~~l~~~G~~v~~g~~~~~~~~~~~~---~---~-~~~~~i-~g~~~~~~~~~~~~~~ll~~~~~~  322 (361)
                      .+..+++. |+-+.+..   +...+..+   +   . .+++.+ .+........++.+.+++.+|.+-
T Consensus        78 ~~~~al~~-Gk~v~~ek---P~~~~~~~~~~l~~~a~~~g~~~~~~~~~r~~p~~~~~~~~i~~g~iG  141 (332)
T 2glx_A           78 QTLAAIRA-GKHVLCEK---PLAMTLEDAREMVVAAREAGVVLGTNHHLRNAAAHRAMRDAIAEGRIG  141 (332)
T ss_dssp             HHHHHHHT-TCEEEECS---SSCSSHHHHHHHHHHHHHHTCCEEECCCGGGSHHHHHHHHHHHTTTTS
T ss_pred             HHHHHHHC-CCeEEEeC---CCcCCHHHHHHHHHHHHHcCCEEEEeehhhcCHHHHHHHHHHHcCCCC
Confidence            66667766 45555532   22222221   1   1 123333 333333334467777777777664

>2gas_A Isoflavone reductase; NADPH-dependent reductase, oxidoreductase; 1.60A {Medicago sativa}

Probab=96.53  E-value=0.0097  Score=52.87  Aligned_cols=92  Identities=16%  Similarity=0.162  Sum_probs=63.3

Q ss_pred             CCEEEEEcC-ChHHHHHHHHHHHcCCeEEEEeCCc-------hhHHHHH--HHcCCCE-EecCCCHHHHHHhcCCccEEE
Q 018067          184 GMHVGVVGL-GGLGHVAVKFAKAMGVKVTVISTSP-------SKKSEAI--ERLGADS-FLVSRDQDEMQAAMGTMDGII  252 (361)
Q Consensus       184 g~~vlV~Ga-g~vG~~a~~la~~~g~~vi~~~~~~-------~~~~~~~--~~~g~~~-vv~~~~~~~~~~~~~g~d~vi  252 (361)
                      +.+|||+|+ |.+|..++..+...|.+|++++++.       ++...+.  +..++.. ..|..+++.+.++..++|+||
T Consensus         2 ~~~vlVtGatG~iG~~l~~~L~~~g~~V~~~~R~~~~~~~~~~~~~~~~~l~~~~v~~v~~D~~d~~~l~~~~~~~d~vi   81 (307)
T 2gas_A            2 ENKILILGPTGAIGRHIVWASIKAGNPTYALVRKTITAANPETKEELIDNYQSLGVILLEGDINDHETLVKAIKQVDIVI   81 (307)
T ss_dssp             CCCEEEESTTSTTHHHHHHHHHHHTCCEEEEECCSCCSSCHHHHHHHHHHHHHTTCEEEECCTTCHHHHHHHHTTCSEEE
T ss_pred             CcEEEEECCCchHHHHHHHHHHhCCCcEEEEECCCcccCChHHHHHHHHHHHhCCCEEEEeCCCCHHHHHHHHhCCCEEE
Confidence            457999998 9999999999888899999999886       3332221  2335542 246667777777778999999


Q ss_pred             EcCCCcc--cHHHHHhccccC---CEEE
Q 018067          253 DTVSAVH--PLMPLIGLLKSQ---GKLV  275 (361)
Q Consensus       253 d~~g~~~--~~~~~~~~l~~~---G~~v  275 (361)
                      ++++...  .....++.++..   .+++
T Consensus        82 ~~a~~~~~~~~~~l~~aa~~~g~v~~~v  109 (307)
T 2gas_A           82 CAAGRLLIEDQVKIIKAIKEAGNVKKFF  109 (307)
T ss_dssp             ECSSSSCGGGHHHHHHHHHHHCCCSEEE
T ss_pred             ECCcccccccHHHHHHHHHhcCCceEEe
Confidence            9998632  233444444432   4666

>3oec_A Carveol dehydrogenase (mytha.01326.C, A0R518 HOMO; ssgcid, structural genomics; 1.95A {Mycobacterium thermoresistibile}

Probab=96.53  E-value=0.01  Score=53.32  Aligned_cols=76  Identities=22%  Similarity=0.299  Sum_probs=52.9

Q ss_pred             CCCCEEEEEcC-ChHHHHHHHHHHHcCCeEEEEeCC------------chhHHHHH---HHcCCCE---EecCCCHHHHH
Q 018067          182 KPGMHVGVVGL-GGLGHVAVKFAKAMGVKVTVISTS------------PSKKSEAI---ERLGADS---FLVSRDQDEMQ  242 (361)
Q Consensus       182 ~~g~~vlV~Ga-g~vG~~a~~la~~~g~~vi~~~~~------------~~~~~~~~---~~~g~~~---vv~~~~~~~~~  242 (361)
                      -.|+++||.|+ |++|.++++.+...|++|++++++            .++..+..   +..+...   ..|-.+++.+.
T Consensus        44 l~gk~~lVTGas~GIG~aia~~la~~G~~Vv~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~Dv~d~~~v~  123 (317)
T 3oec_A           44 LQGKVAFITGAARGQGRTHAVRLAQDGADIVAIDLCRQQPNLDYAQGSPEELKETVRLVEEQGRRIIARQADVRDLASLQ  123 (317)
T ss_dssp             TTTCEEEESSCSSHHHHHHHHHHHHTTCEEEEEECCCCCTTCCSCCCCHHHHHHHHHHHHHTTCCEEEEECCTTCHHHHH
T ss_pred             cCCCEEEEeCCCcHHHHHHHHHHHHCCCeEEEEecccccccccccccCHHHHHHHHHHHHhcCCeEEEEECCCCCHHHHH
Confidence            36789999987 999999999999999999999875            33333332   2334432   23555554443


Q ss_pred             Hh-------cCCccEEEEcCCC
Q 018067          243 AA-------MGTMDGIIDTVSA  257 (361)
Q Consensus       243 ~~-------~~g~d~vid~~g~  257 (361)
                      ++       .+++|++|+++|.
T Consensus       124 ~~~~~~~~~~g~iD~lVnnAg~  145 (317)
T 3oec_A          124 AVVDEALAEFGHIDILVSNVGI  145 (317)
T ss_dssp             HHHHHHHHHHSCCCEEEECCCC
T ss_pred             HHHHHHHHHcCCCCEEEECCCC
Confidence            32       2479999999984

>2fk8_A Methoxy mycolic acid synthase 4; S-adenosylmethionine-dependent methyltransferase fold, trans; HET: SAM; 2.00A {Mycobacterium tuberculosis} SCOP: c.66.1.18 PDB: 2fk7_A* 3ha3_A* 3ha5_A* 3ha7_A*

Probab=96.52  E-value=0.01  Score=53.29  Aligned_cols=99  Identities=14%  Similarity=0.180  Sum_probs=67.2

Q ss_pred             hcCCCCCCCEEEEEcCChHHHHHHHHHHHcCCeEEEEeCCchhHHHHHHHc---CCC--EEecCCCHHHHHHhcCCccEE
Q 018067          177 FYGLDKPGMHVGVVGLGGLGHVAVKFAKAMGVKVTVISTSPSKKSEAIERL---GAD--SFLVSRDQDEMQAAMGTMDGI  251 (361)
Q Consensus       177 ~~~~~~~g~~vlV~Gag~vG~~a~~la~~~g~~vi~~~~~~~~~~~~~~~~---g~~--~vv~~~~~~~~~~~~~g~d~v  251 (361)
                      ....++++++||-+|+|. |..+..+++..|++|+.++.+++....+.+.+   |..  ..+...+.   ..+.+.+|+|
T Consensus        84 ~~~~~~~~~~vLDiGcG~-G~~~~~la~~~~~~v~gvD~s~~~~~~a~~~~~~~~~~~~v~~~~~d~---~~~~~~fD~v  159 (318)
T 2fk8_A           84 DKLDLKPGMTLLDIGCGW-GTTMRRAVERFDVNVIGLTLSKNQHARCEQVLASIDTNRSRQVLLQGW---EDFAEPVDRI  159 (318)
T ss_dssp             TTSCCCTTCEEEEESCTT-SHHHHHHHHHHCCEEEEEESCHHHHHHHHHHHHTSCCSSCEEEEESCG---GGCCCCCSEE
T ss_pred             HhcCCCCcCEEEEEcccc-hHHHHHHHHHCCCEEEEEECCHHHHHHHHHHHHhcCCCCceEEEECCh---HHCCCCcCEE
Confidence            334468999999999976 88888999888999999999887765553332   321  11111221   1223679999


Q ss_pred             EEc-----CCC---cccHHHHHhccccCCEEEEecC
Q 018067          252 IDT-----VSA---VHPLMPLIGLLKSQGKLVLVGA  279 (361)
Q Consensus       252 id~-----~g~---~~~~~~~~~~l~~~G~~v~~g~  279 (361)
                      +..     .+.   ...+..+.+.|+++|+++....
T Consensus       160 ~~~~~l~~~~~~~~~~~l~~~~~~LkpgG~l~~~~~  195 (318)
T 2fk8_A          160 VSIEAFEHFGHENYDDFFKRCFNIMPADGRMTVQSS  195 (318)
T ss_dssp             EEESCGGGTCGGGHHHHHHHHHHHSCTTCEEEEEEE
T ss_pred             EEeChHHhcCHHHHHHHHHHHHHhcCCCcEEEEEEe
Confidence            876     332   2346677889999999987643

>4iin_A 3-ketoacyl-acyl carrier protein reductase (FABG); structural genomics, center for structural genomics of infec diseases, csgid; HET: NAD; 2.40A {Helicobacter pylori} PDB: 4ijk_A

Probab=96.52  E-value=0.0058  Score=53.58  Aligned_cols=75  Identities=20%  Similarity=0.282  Sum_probs=52.1

Q ss_pred             CCCEEEEEcC-ChHHHHHHHHHHHcCCeEEEEeCCchh-HHHHH---HHcCCCE---EecCCCHHHHHHh-------cCC
Q 018067          183 PGMHVGVVGL-GGLGHVAVKFAKAMGVKVTVISTSPSK-KSEAI---ERLGADS---FLVSRDQDEMQAA-------MGT  247 (361)
Q Consensus       183 ~g~~vlV~Ga-g~vG~~a~~la~~~g~~vi~~~~~~~~-~~~~~---~~~g~~~---vv~~~~~~~~~~~-------~~g  247 (361)
                      .|+++||.|+ |++|..+++.+...|++|+++++..++ .+.+.   ++.+...   ..|..+++.+.++       .++
T Consensus        28 ~~k~vlITGas~gIG~~la~~l~~~G~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~D~~~~~~v~~~~~~~~~~~g~  107 (271)
T 4iin_A           28 TGKNVLITGASKGIGAEIAKTLASMGLKVWINYRSNAEVADALKNELEEKGYKAAVIKFDAASESDFIEAIQTIVQSDGG  107 (271)
T ss_dssp             SCCEEEETTCSSHHHHHHHHHHHHTTCEEEEEESSCHHHHHHHHHHHHHTTCCEEEEECCTTCHHHHHHHHHHHHHHHSS
T ss_pred             CCCEEEEECCCcHHHHHHHHHHHHCCCEEEEEeCCCHHHHHHHHHHHHhcCCceEEEECCCCCHHHHHHHHHHHHHhcCC
Confidence            5789999987 999999999999999999999995443 23222   2334332   2244554433322       248


Q ss_pred             ccEEEEcCCC
Q 018067          248 MDGIIDTVSA  257 (361)
Q Consensus       248 ~d~vid~~g~  257 (361)
                      +|++|+++|.
T Consensus       108 id~li~nAg~  117 (271)
T 4iin_A          108 LSYLVNNAGV  117 (271)
T ss_dssp             CCEEEECCCC
T ss_pred             CCEEEECCCc
Confidence            9999999985

>3enk_A UDP-glucose 4-epimerase; seattle structural genomics center for infectious disease, ssgcid, isomerase, NAD; HET: NAD GUD; 1.90A {Burkholderia pseudomallei 1710B} SCOP: c.2.1.0

Probab=96.51  E-value=0.0061  Score=55.15  Aligned_cols=76  Identities=20%  Similarity=0.154  Sum_probs=54.0

Q ss_pred             CCCEEEEEcC-ChHHHHHHHHHHHcCCeEEEEeCCchhHHHHHHH----cC--CCE-EecCCCHHHHHHhcC--CccEEE
Q 018067          183 PGMHVGVVGL-GGLGHVAVKFAKAMGVKVTVISTSPSKKSEAIER----LG--ADS-FLVSRDQDEMQAAMG--TMDGII  252 (361)
Q Consensus       183 ~g~~vlV~Ga-g~vG~~a~~la~~~g~~vi~~~~~~~~~~~~~~~----~g--~~~-vv~~~~~~~~~~~~~--g~d~vi  252 (361)
                      .+.+|||.|+ |.+|..+++.+...|++|+++++..++.....+.    .+  ... ..|..+++.+.++..  ++|+||
T Consensus         4 ~~~~vlVTGatG~iG~~l~~~L~~~G~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~Dl~d~~~~~~~~~~~~~d~vi   83 (341)
T 3enk_A            4 TKGTILVTGGAGYIGSHTAVELLAHGYDVVIADNLVNSKREAIARIEKITGKTPAFHETDVSDERALARIFDAHPITAAI   83 (341)
T ss_dssp             SSCEEEEETTTSHHHHHHHHHHHHTTCEEEEECCCSSSCTHHHHHHHHHHSCCCEEECCCTTCHHHHHHHHHHSCCCEEE
T ss_pred             CCcEEEEecCCcHHHHHHHHHHHHCCCcEEEEecCCcchHHHHHHHHhhcCCCceEEEeecCCHHHHHHHHhccCCcEEE
Confidence            4568999997 9999999999999999999998876543333222    23  221 224556666666544  899999


Q ss_pred             EcCCCc
Q 018067          253 DTVSAV  258 (361)
Q Consensus       253 d~~g~~  258 (361)
                      ++++..
T Consensus        84 h~A~~~   89 (341)
T 3enk_A           84 HFAALK   89 (341)
T ss_dssp             ECCCCC
T ss_pred             ECcccc
Confidence            999853

>2dkn_A 3-alpha-hydroxysteroid dehydrogenase; oxidoreductase, rossmann fold; HET: NAI; 1.80A {Pseudomonas SP}

Probab=96.51  E-value=0.0024  Score=55.11  Aligned_cols=89  Identities=20%  Similarity=0.257  Sum_probs=57.1

Q ss_pred             CEEEEEcC-ChHHHHHHHHHHHcCCeEEEEeCCchhHHHHHHHcCCCEEecCCCHHHHHHhc----CCccEEEEcCCCcc
Q 018067          185 MHVGVVGL-GGLGHVAVKFAKAMGVKVTVISTSPSKKSEAIERLGADSFLVSRDQDEMQAAM----GTMDGIIDTVSAVH  259 (361)
Q Consensus       185 ~~vlV~Ga-g~vG~~a~~la~~~g~~vi~~~~~~~~~~~~~~~~g~~~vv~~~~~~~~~~~~----~g~d~vid~~g~~~  259 (361)
                      ++|||.|+ |.+|..++..+...|++|++++++.++...       ....|..+.+.+..+.    +++|++|+++|...
T Consensus         2 k~vlVtGasg~iG~~l~~~L~~~g~~V~~~~r~~~~~~~-------~~~~D~~~~~~~~~~~~~~~~~~d~vi~~Ag~~~   74 (255)
T 2dkn_A            2 SVIAITGSASGIGAALKELLARAGHTVIGIDRGQADIEA-------DLSTPGGRETAVAAVLDRCGGVLDGLVCCAGVGV   74 (255)
T ss_dssp             CEEEEETTTSHHHHHHHHHHHHTTCEEEEEESSSSSEEC-------CTTSHHHHHHHHHHHHHHHTTCCSEEEECCCCCT
T ss_pred             cEEEEeCCCcHHHHHHHHHHHhCCCEEEEEeCChhHccc-------cccCCcccHHHHHHHHHHcCCCccEEEECCCCCC
Confidence            36899998 999999999998899999999987654211       1001222223333322    58999999988532


Q ss_pred             ------------------cHHHHHhcccc--CCEEEEecCC
Q 018067          260 ------------------PLMPLIGLLKS--QGKLVLVGAP  280 (361)
Q Consensus       260 ------------------~~~~~~~~l~~--~G~~v~~g~~  280 (361)
                                        .++.+...++.  .++++.+++.
T Consensus        75 ~~~~~~~~~~~N~~~~~~l~~~~~~~~~~~~~~~iv~~sS~  115 (255)
T 2dkn_A           75 TAANSGLVVAVNYFGVSALLDGLAEALSRGQQPAAVIVGSI  115 (255)
T ss_dssp             TSSCHHHHHHHHTHHHHHHHHHHHHHHHTSSSCEEEEECCG
T ss_pred             cchhHHHHHHHHhHHHHHHHHHHHHHhhhcCCceEEEEecc
Confidence                              11223334433  3899998764

>2qhx_A Pteridine reductase 1; oxidoreductase, short-chain dehydrogenase/reductase, trypanosomatid, pterin salvage, drug resistance; HET: NAP FE1; 2.61A {Leishmania major} SCOP: c.2.1.2

Probab=96.51  E-value=0.0041  Score=56.33  Aligned_cols=44  Identities=18%  Similarity=0.061  Sum_probs=37.0

Q ss_pred             CCCEEEEEcC-ChHHHHHHHHHHHcCCeEEEEe-CCchhHHHHHHH
Q 018067          183 PGMHVGVVGL-GGLGHVAVKFAKAMGVKVTVIS-TSPSKKSEAIER  226 (361)
Q Consensus       183 ~g~~vlV~Ga-g~vG~~a~~la~~~g~~vi~~~-~~~~~~~~~~~~  226 (361)
                      .++++||.|+ |++|.++++.+...|++|++++ ++.++...+.++
T Consensus        45 ~~k~~lVTGas~GIG~aia~~La~~G~~Vv~~~~r~~~~~~~~~~~   90 (328)
T 2qhx_A           45 TVPVALVTGAAKRLGRSIAEGLHAEGYAVCLHYHRSAAEANALSAT   90 (328)
T ss_dssp             CCCEEEETTCSSHHHHHHHHHHHHTTCEEEEEESSCHHHHHHHHHH
T ss_pred             CCCEEEEECCCCHHHHHHHHHHHHCCCEEEEEcCCCHHHHHHHHHH
Confidence            4678999987 9999999999999999999999 887766555443

>2pwy_A TRNA (adenine-N(1)-)-methyltransferase; mtase, adoMet, TRMI, tRNA-M1A58; HET: SAH; 1.70A {Thermus thermophilus}

Probab=96.50  E-value=0.0096  Score=51.48  Aligned_cols=98  Identities=20%  Similarity=0.151  Sum_probs=67.9

Q ss_pred             CCCCCCCEEEEEcCChHHHHHHHHHHHc--CCeEEEEeCCchhHHHHHHHc----CCCE-EecCCCHHHHHHhc-CCccE
Q 018067          179 GLDKPGMHVGVVGLGGLGHVAVKFAKAM--GVKVTVISTSPSKKSEAIERL----GADS-FLVSRDQDEMQAAM-GTMDG  250 (361)
Q Consensus       179 ~~~~~g~~vlV~Gag~vG~~a~~la~~~--g~~vi~~~~~~~~~~~~~~~~----g~~~-vv~~~~~~~~~~~~-~g~d~  250 (361)
                      ..++++++||-+|+|. |..+..+++..  +.+|+.++.+++....+.+.+    |.+. .+...+.... .+. +.+|+
T Consensus        92 ~~~~~~~~vLdiG~G~-G~~~~~l~~~~~~~~~v~~~D~~~~~~~~a~~~~~~~~g~~~v~~~~~d~~~~-~~~~~~~D~  169 (258)
T 2pwy_A           92 LDLAPGMRVLEAGTGS-GGLTLFLARAVGEKGLVESYEARPHHLAQAERNVRAFWQVENVRFHLGKLEEA-ELEEAAYDG  169 (258)
T ss_dssp             TTCCTTCEEEEECCTT-SHHHHHHHHHHCTTSEEEEEESCHHHHHHHHHHHHHHCCCCCEEEEESCGGGC-CCCTTCEEE
T ss_pred             cCCCCCCEEEEECCCc-CHHHHHHHHHhCCCCEEEEEeCCHHHHHHHHHHHHHhcCCCCEEEEECchhhc-CCCCCCcCE
Confidence            4478999999999985 88899999985  569999998887665553332    5321 1111221110 122 36999


Q ss_pred             EEEcCCCc-ccHHHHHhccccCCEEEEec
Q 018067          251 IIDTVSAV-HPLMPLIGLLKSQGKLVLVG  278 (361)
Q Consensus       251 vid~~g~~-~~~~~~~~~l~~~G~~v~~g  278 (361)
                      |+...... ..+..+.+.|+++|+++.+.
T Consensus       170 v~~~~~~~~~~l~~~~~~L~~gG~l~~~~  198 (258)
T 2pwy_A          170 VALDLMEPWKVLEKAALALKPDRFLVAYL  198 (258)
T ss_dssp             EEEESSCGGGGHHHHHHHEEEEEEEEEEE
T ss_pred             EEECCcCHHHHHHHHHHhCCCCCEEEEEe
Confidence            98776664 56888999999999999874

>2i99_A MU-crystallin homolog; thyroid hormine binding protein, oxidoreductase; HET: NDP; 2.60A {Homo sapiens}

Probab=96.50  E-value=0.026  Score=50.64  Aligned_cols=113  Identities=16%  Similarity=0.171  Sum_probs=72.6

Q ss_pred             CCCCEEEEEcCChHHHHHHHHHHHc-CC-eEEEEeCCchhHHHHHHHcCCCEEecCCCHHHHHHhcCCccEEEEcCCCcc
Q 018067          182 KPGMHVGVVGLGGLGHVAVKFAKAM-GV-KVTVISTSPSKKSEAIERLGADSFLVSRDQDEMQAAMGTMDGIIDTVSAVH  259 (361)
Q Consensus       182 ~~g~~vlV~Gag~vG~~a~~la~~~-g~-~vi~~~~~~~~~~~~~~~~g~~~vv~~~~~~~~~~~~~g~d~vid~~g~~~  259 (361)
                      ....++.|+|+|.+|...+..+... |. +|.+.+++.++.+.++++++.. +....+   ..++..+.|+|+.++....
T Consensus       133 ~~~~~igiIG~G~~g~~~a~~l~~~~g~~~V~v~dr~~~~~~~l~~~~~~~-~~~~~~---~~e~v~~aDiVi~atp~~~  208 (312)
T 2i99_A          133 PSSEVLCILGAGVQAYSHYEIFTEQFSFKEVRIWNRTKENAEKFADTVQGE-VRVCSS---VQEAVAGADVIITVTLATE  208 (312)
T ss_dssp             TTCCEEEEECCSHHHHHHHHHHHHHCCCSEEEEECSSHHHHHHHHHHSSSC-CEECSS---HHHHHTTCSEEEECCCCSS
T ss_pred             CCCcEEEEECCcHHHHHHHHHHHHhCCCcEEEEEcCCHHHHHHHHHHhhCC-eEEeCC---HHHHHhcCCEEEEEeCCCC
Confidence            5677899999999999888777654 87 8999999988888887777721 111222   2233456899999987532


Q ss_pred             cHHHHHhccccCCEEEEecCCCCCc-ccChHHHHhCCcEEEe
Q 018067          260 PLMPLIGLLKSQGKLVLVGAPEKPL-ELPAFSLLMGRKIVGG  300 (361)
Q Consensus       260 ~~~~~~~~l~~~G~~v~~g~~~~~~-~~~~~~~~~~~~~i~g  300 (361)
                      .+-.. ..++++-.++.+|...... .+. ..+..+...+..
T Consensus       209 ~v~~~-~~l~~g~~vi~~g~~~p~~~el~-~~~~~~g~~~vD  248 (312)
T 2i99_A          209 PILFG-EWVKPGAHINAVGASRPDWRELD-DELMKEAVLYVD  248 (312)
T ss_dssp             CCBCG-GGSCTTCEEEECCCCSTTCCSBC-HHHHHHSEEEES
T ss_pred             cccCH-HHcCCCcEEEeCCCCCCCceecc-HHHHhcCEEEEC
Confidence            11111 5678888888887654322 232 233344544444

>1vbf_A 231AA long hypothetical protein-L-isoaspartate O- methyltransferase; trimeric coiled coil assembly; 2.80A {Sulfolobus tokodaii} SCOP: c.66.1.7

Probab=96.50  E-value=0.011  Score=50.12  Aligned_cols=99  Identities=19%  Similarity=0.069  Sum_probs=67.1

Q ss_pred             CCCCCCCEEEEEcCChHHHHHHHHHHHcCCeEEEEeCCchhHHHHHHHcCC--CEEecCCCHHHHHHhcCCccEEEEcCC
Q 018067          179 GLDKPGMHVGVVGLGGLGHVAVKFAKAMGVKVTVISTSPSKKSEAIERLGA--DSFLVSRDQDEMQAAMGTMDGIIDTVS  256 (361)
Q Consensus       179 ~~~~~g~~vlV~Gag~vG~~a~~la~~~g~~vi~~~~~~~~~~~~~~~~g~--~~vv~~~~~~~~~~~~~g~d~vid~~g  256 (361)
                      ..++++++||-+|+|. |..+..+++.. .+|+.++.+++....+.+.+..  ..-+...+........+.+|+|+....
T Consensus        66 ~~~~~~~~vLdiG~G~-G~~~~~l~~~~-~~v~~vD~~~~~~~~a~~~~~~~~~v~~~~~d~~~~~~~~~~fD~v~~~~~  143 (231)
T 1vbf_A           66 LDLHKGQKVLEIGTGI-GYYTALIAEIV-DKVVSVEINEKMYNYASKLLSYYNNIKLILGDGTLGYEEEKPYDRVVVWAT  143 (231)
T ss_dssp             TTCCTTCEEEEECCTT-SHHHHHHHHHS-SEEEEEESCHHHHHHHHHHHTTCSSEEEEESCGGGCCGGGCCEEEEEESSB
T ss_pred             cCCCCCCEEEEEcCCC-CHHHHHHHHHc-CEEEEEeCCHHHHHHHHHHHhhcCCeEEEECCcccccccCCCccEEEECCc
Confidence            3468899999999986 88888888874 8999999988776665444331  211111221110012357999988766


Q ss_pred             CcccHHHHHhccccCCEEEEecC
Q 018067          257 AVHPLMPLIGLLKSQGKLVLVGA  279 (361)
Q Consensus       257 ~~~~~~~~~~~l~~~G~~v~~g~  279 (361)
                      -.+....+.+.|+++|+++..-.
T Consensus       144 ~~~~~~~~~~~L~pgG~l~~~~~  166 (231)
T 1vbf_A          144 APTLLCKPYEQLKEGGIMILPIG  166 (231)
T ss_dssp             BSSCCHHHHHTEEEEEEEEEEEC
T ss_pred             HHHHHHHHHHHcCCCcEEEEEEc
Confidence            66656789999999999987743

>3ujc_A Phosphoethanolamine N-methyltransferase; parasite; HET: PC; 1.19A {Plasmodium falciparum} PDB: 3uj9_A* 3uj6_A* 3uj7_A* 3uj8_A* 3uja_A 3ujb_A* 4fgz_A* 3ujd_A*

Probab=96.49  E-value=0.0073  Score=52.41  Aligned_cols=98  Identities=18%  Similarity=0.149  Sum_probs=66.4

Q ss_pred             CCCCCCEEEEEcCChHHHHHHHHHHHcCCeEEEEeCCchhHHHHHHHcCC--C-EEecCCCHHHHHHhcCCccEEEEcCC
Q 018067          180 LDKPGMHVGVVGLGGLGHVAVKFAKAMGVKVTVISTSPSKKSEAIERLGA--D-SFLVSRDQDEMQAAMGTMDGIIDTVS  256 (361)
Q Consensus       180 ~~~~g~~vlV~Gag~vG~~a~~la~~~g~~vi~~~~~~~~~~~~~~~~g~--~-~vv~~~~~~~~~~~~~g~d~vid~~g  256 (361)
                      .++++.+||-+|+| .|..+..+++..+++|+.++.+++....+.+....  . .++. .+........+.+|+|+..-.
T Consensus        52 ~~~~~~~vLdiG~G-~G~~~~~l~~~~~~~v~~vD~s~~~~~~a~~~~~~~~~~~~~~-~d~~~~~~~~~~fD~v~~~~~  129 (266)
T 3ujc_A           52 ELNENSKVLDIGSG-LGGGCMYINEKYGAHTHGIDICSNIVNMANERVSGNNKIIFEA-NDILTKEFPENNFDLIYSRDA  129 (266)
T ss_dssp             CCCTTCEEEEETCT-TSHHHHHHHHHHCCEEEEEESCHHHHHHHHHTCCSCTTEEEEE-CCTTTCCCCTTCEEEEEEESC
T ss_pred             CCCCCCEEEEECCC-CCHHHHHHHHHcCCEEEEEeCCHHHHHHHHHHhhcCCCeEEEE-CccccCCCCCCcEEEEeHHHH
Confidence            46889999999997 68888888887799999999998776666443321  1 1111 111111111247999987644


Q ss_pred             Ccc--------cHHHHHhccccCCEEEEecC
Q 018067          257 AVH--------PLMPLIGLLKSQGKLVLVGA  279 (361)
Q Consensus       257 ~~~--------~~~~~~~~l~~~G~~v~~g~  279 (361)
                      -.+        .+..+.+.|+|+|.++....
T Consensus       130 l~~~~~~~~~~~l~~~~~~L~pgG~l~~~~~  160 (266)
T 3ujc_A          130 ILALSLENKNKLFQKCYKWLKPTGTLLITDY  160 (266)
T ss_dssp             GGGSCHHHHHHHHHHHHHHEEEEEEEEEEEE
T ss_pred             HHhcChHHHHHHHHHHHHHcCCCCEEEEEEe
Confidence            333        25778889999999998754

>3nrc_A Enoyl-[acyl-carrier-protein] reductase (NADH); rossmann fold, NADH BI oxidoreductase; HET: NAD TCL; 2.10A {Francisella tularensis subsp} PDB: 3uic_A* 2jjy_A*

Probab=96.49  E-value=0.014  Score=51.29  Aligned_cols=76  Identities=11%  Similarity=0.172  Sum_probs=53.9

Q ss_pred             CCCCEEEEEcC-Ch--HHHHHHHHHHHcCCeEEEEeCCc--hhHHHHHHHcCCCE--EecCCCHHHHHHh-------cCC
Q 018067          182 KPGMHVGVVGL-GG--LGHVAVKFAKAMGVKVTVISTSP--SKKSEAIERLGADS--FLVSRDQDEMQAA-------MGT  247 (361)
Q Consensus       182 ~~g~~vlV~Ga-g~--vG~~a~~la~~~g~~vi~~~~~~--~~~~~~~~~~g~~~--vv~~~~~~~~~~~-------~~g  247 (361)
                      -.++++||.|+ |.  +|..+++.+...|++|++++++.  +...++.++.+...  ..|..+.+.+.++       .++
T Consensus        24 l~~k~vlVTGasg~~GIG~~ia~~l~~~G~~V~~~~r~~~~~~~~~l~~~~~~~~~~~~Dl~~~~~v~~~~~~~~~~~g~  103 (280)
T 3nrc_A           24 LAGKKILITGLLSNKSIAYGIAKAMHREGAELAFTYVGQFKDRVEKLCAEFNPAAVLPCDVISDQEIKDLFVELGKVWDG  103 (280)
T ss_dssp             TTTCEEEECCCCSTTCHHHHHHHHHHHTTCEEEEEECTTCHHHHHHHHGGGCCSEEEECCTTCHHHHHHHHHHHHHHCSS
T ss_pred             cCCCEEEEECCCCCCCHHHHHHHHHHHcCCEEEEeeCchHHHHHHHHHHhcCCceEEEeecCCHHHHHHHHHHHHHHcCC
Confidence            35789999985 44  99999999999999999999887  55555544444322  2355555443332       247


Q ss_pred             ccEEEEcCCC
Q 018067          248 MDGIIDTVSA  257 (361)
Q Consensus       248 ~d~vid~~g~  257 (361)
                      +|++|+++|.
T Consensus       104 id~li~nAg~  113 (280)
T 3nrc_A          104 LDAIVHSIAF  113 (280)
T ss_dssp             CCEEEECCCC
T ss_pred             CCEEEECCcc
Confidence            9999999985

>2ekp_A 2-deoxy-D-gluconate 3-dehydrogenase; structural genomics, NPPSFA, nation project on protein structural and functional analyses; HET: NAD; 1.15A {Thermus thermophilus} PDB: 1x1e_A* 2ekq_A

Probab=96.47  E-value=0.008  Score=51.58  Aligned_cols=71  Identities=21%  Similarity=0.290  Sum_probs=50.0

Q ss_pred             CCEEEEEcC-ChHHHHHHHHHHHcCCeEEEEeCCchhHHHHHHHcCCCE-EecCCCH---HHHHH---hcCCccEEEEcC
Q 018067          184 GMHVGVVGL-GGLGHVAVKFAKAMGVKVTVISTSPSKKSEAIERLGADS-FLVSRDQ---DEMQA---AMGTMDGIIDTV  255 (361)
Q Consensus       184 g~~vlV~Ga-g~vG~~a~~la~~~g~~vi~~~~~~~~~~~~~~~~g~~~-vv~~~~~---~~~~~---~~~g~d~vid~~  255 (361)
                      ++++||.|+ |++|.++++.+...|++|++++++.++   +.+++++.. ..|..+.   ..+.+   ..+++|++|+++
T Consensus         2 ~k~vlVTGas~giG~~~a~~l~~~G~~V~~~~r~~~~---~~~~~~~~~~~~D~~~~~~~~~~~~~~~~~g~id~lv~~A   78 (239)
T 2ekp_A            2 ERKALVTGGSRGIGRAIAEALVARGYRVAIASRNPEE---AAQSLGAVPLPTDLEKDDPKGLVKRALEALGGLHVLVHAA   78 (239)
T ss_dssp             CCEEEEETTTSHHHHHHHHHHHHTTCEEEEEESSCHH---HHHHHTCEEEECCTTTSCHHHHHHHHHHHHTSCCEEEECC
T ss_pred             CCEEEEeCCCcHHHHHHHHHHHHCCCEEEEEeCCHHH---HHHhhCcEEEecCCchHHHHHHHHHHHHHcCCCCEEEECC
Confidence            578999998 999999999999999999999998765   234445322 1233331   12222   235799999999


Q ss_pred             CC
Q 018067          256 SA  257 (361)
Q Consensus       256 g~  257 (361)
                      |.
T Consensus        79 g~   80 (239)
T 2ekp_A           79 AV   80 (239)
T ss_dssp             CC
T ss_pred             CC
Confidence            84

>3sxp_A ADP-L-glycero-D-mannoheptose-6-epimerase; rossman fold, NAD binding, isomerase; HET: NAD; 2.55A {Helicobacter pylori}

Probab=96.47  E-value=0.0056  Score=56.00  Aligned_cols=74  Identities=11%  Similarity=0.030  Sum_probs=53.4

Q ss_pred             CCCEEEEEcC-ChHHHHHHHHHHH--cCCeEEEEeCCchh-------------HHHHHHHcCCC-EEecCCCHHHHHHh-
Q 018067          183 PGMHVGVVGL-GGLGHVAVKFAKA--MGVKVTVISTSPSK-------------KSEAIERLGAD-SFLVSRDQDEMQAA-  244 (361)
Q Consensus       183 ~g~~vlV~Ga-g~vG~~a~~la~~--~g~~vi~~~~~~~~-------------~~~~~~~~g~~-~vv~~~~~~~~~~~-  244 (361)
                      .+.+|||.|+ |.+|..++..+..  .|++|+++++....             ...+ ...+.. ...|..+++.+..+ 
T Consensus         9 ~~~~vlVTGatG~IG~~l~~~L~~~~~g~~V~~~~r~~~~~~~~~~~~~~~~~~~~~-~~~~~~~~~~Dl~d~~~~~~~~   87 (362)
T 3sxp_A            9 ENQTILITGGAGFVGSNLAFHFQENHPKAKVVVLDKFRSNTLFSNNRPSSLGHFKNL-IGFKGEVIAADINNPLDLRRLE   87 (362)
T ss_dssp             TTCEEEEETTTSHHHHHHHHHHHHHCTTSEEEEEECCCCC-------CCCCCCGGGG-TTCCSEEEECCTTCHHHHHHHT
T ss_pred             CCCEEEEECCCCHHHHHHHHHHHhhCCCCeEEEEECCCccccccccchhhhhhhhhc-cccCceEEECCCCCHHHHHHhh
Confidence            5689999998 9999999999988  89999999986541             1011 111122 22355667777777 


Q ss_pred             cCCccEEEEcCCC
Q 018067          245 MGTMDGIIDTVSA  257 (361)
Q Consensus       245 ~~g~d~vid~~g~  257 (361)
                      ..++|+||+++|.
T Consensus        88 ~~~~D~vih~A~~  100 (362)
T 3sxp_A           88 KLHFDYLFHQAAV  100 (362)
T ss_dssp             TSCCSEEEECCCC
T ss_pred             ccCCCEEEECCcc
Confidence            6799999999984

>3i4f_A 3-oxoacyl-[acyl-carrier protein] reductase; structural genomics, 3-oxoacyl-reductase, PSI-2; 2.39A {Bacillus thuringiensis serovar kurstakorganism_taxid} SCOP: c.2.1.0

Probab=96.46  E-value=0.0086  Score=52.14  Aligned_cols=74  Identities=20%  Similarity=0.187  Sum_probs=51.2

Q ss_pred             CCCEEEEEcC-ChHHHHHHHHHHHcCCeEEEEeCCchhHHH-HHHHc---CCC---EEecCCCHHHHHHh-------cCC
Q 018067          183 PGMHVGVVGL-GGLGHVAVKFAKAMGVKVTVISTSPSKKSE-AIERL---GAD---SFLVSRDQDEMQAA-------MGT  247 (361)
Q Consensus       183 ~g~~vlV~Ga-g~vG~~a~~la~~~g~~vi~~~~~~~~~~~-~~~~~---g~~---~vv~~~~~~~~~~~-------~~g  247 (361)
                      .++++||.|+ |++|..+++.+...|++|+++++.+++..+ +.+.+   +..   ...|..+++.+.++       .++
T Consensus         6 ~~k~vlVTGas~gIG~~~a~~l~~~G~~v~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~Dl~~~~~v~~~~~~~~~~~g~   85 (264)
T 3i4f_A            6 FVRHALITAGTKGLGKQVTEKLLAKGYSVTVTYHSDTTAMETMKETYKDVEERLQFVQADVTKKEDLHKIVEEAMSHFGK   85 (264)
T ss_dssp             CCCEEEETTTTSHHHHHHHHHHHHTTCEEEEEESSCHHHHHHHHHHTGGGGGGEEEEECCTTSHHHHHHHHHHHHHHHSC
T ss_pred             ccCEEEEeCCCchhHHHHHHHHHHCCCEEEEEcCCChHHHHHHHHHHHhcCCceEEEEecCCCHHHHHHHHHHHHHHhCC
Confidence            4678999997 999999999999999999998777654333 22222   222   12355555544433       248


Q ss_pred             ccEEEEcCC
Q 018067          248 MDGIIDTVS  256 (361)
Q Consensus       248 ~d~vid~~g  256 (361)
                      +|++|+++|
T Consensus        86 id~lv~~Ag   94 (264)
T 3i4f_A           86 IDFLINNAG   94 (264)
T ss_dssp             CCEEECCCC
T ss_pred             CCEEEECCc
Confidence            999999999

>3grz_A L11 mtase, ribosomal protein L11 methyltransferase; methylase, SAM-binding domain, PSI-2, nysgxrc; 2.00A {Lactobacillus delbrueckii subsp}

Probab=96.46  E-value=0.0022  Score=53.64  Aligned_cols=133  Identities=18%  Similarity=0.191  Sum_probs=77.1

Q ss_pred             cceeEEe-ecCCceEECCCCCCcccccccchhhhhhhhHhhhcCCCCCCCEEEEEcCChHHHHHHHHHHHcCC-eEEEEe
Q 018067          137 GYSDIMV-ADEHFVVRIPEGTPLDATAPLLCAGITVYSPLRFYGLDKPGMHVGVVGLGGLGHVAVKFAKAMGV-KVTVIS  214 (361)
Q Consensus       137 ~~a~~v~-v~~~~~~~ip~~~~~~~aa~l~~~~~ta~~~l~~~~~~~~g~~vlV~Gag~vG~~a~~la~~~g~-~vi~~~  214 (361)
                      .|.+|.. .+....+.+++++++..+.. +. .......+...  ++++.+||-+|+|. |..+..+++. +. +++.++
T Consensus        17 ~w~~~~~~~~~~~~~~~~~~~~f~~~~~-~~-~~~~~~~l~~~--~~~~~~vLDiG~G~-G~~~~~l~~~-~~~~v~~vD   90 (205)
T 3grz_A           17 EWEDYQPVFKDQEIIRLDPGLAFGTGNH-QT-TQLAMLGIERA--MVKPLTVADVGTGS-GILAIAAHKL-GAKSVLATD   90 (205)
T ss_dssp             TTCCCCCSSTTCEEEEESCC-----CCH-HH-HHHHHHHHHHH--CSSCCEEEEETCTT-SHHHHHHHHT-TCSEEEEEE
T ss_pred             cccccccCCCCceeEEecCCcccCCCCC-cc-HHHHHHHHHHh--ccCCCEEEEECCCC-CHHHHHHHHC-CCCEEEEEE
Confidence            3566766 67778888898887766531 11 11112223222  46889999999876 7777777764 55 999999


Q ss_pred             CCchhHHHHHHH---cCCC--EEecCCCHHHHHHhcCCccEEEEcCCCcc---cHHHHHhccccCCEEEEec
Q 018067          215 TSPSKKSEAIER---LGAD--SFLVSRDQDEMQAAMGTMDGIIDTVSAVH---PLMPLIGLLKSQGKLVLVG  278 (361)
Q Consensus       215 ~~~~~~~~~~~~---~g~~--~vv~~~~~~~~~~~~~g~d~vid~~g~~~---~~~~~~~~l~~~G~~v~~g  278 (361)
                      .+++..+.+.+.   .+..  .++..+-.   ....+.+|+|+-......   .+..+.+.|+++|+++...
T Consensus        91 ~s~~~~~~a~~~~~~~~~~~v~~~~~d~~---~~~~~~fD~i~~~~~~~~~~~~l~~~~~~L~~gG~l~~~~  159 (205)
T 3grz_A           91 ISDESMTAAEENAALNGIYDIALQKTSLL---ADVDGKFDLIVANILAEILLDLIPQLDSHLNEDGQVIFSG  159 (205)
T ss_dssp             SCHHHHHHHHHHHHHTTCCCCEEEESSTT---TTCCSCEEEEEEESCHHHHHHHGGGSGGGEEEEEEEEEEE
T ss_pred             CCHHHHHHHHHHHHHcCCCceEEEecccc---ccCCCCceEEEECCcHHHHHHHHHHHHHhcCCCCEEEEEe
Confidence            888765444332   3432  22222111   122357999987654332   2445667889999998854

>4hy3_A Phosphoglycerate oxidoreductase; PSI-biology, structural genomics, protein structure initiati acid transport and metabolism, NAD binding domain.; 2.80A {Rhizobium etli}

Probab=96.45  E-value=0.032  Score=51.09  Aligned_cols=88  Identities=15%  Similarity=0.313  Sum_probs=65.2

Q ss_pred             CCCEEEEEcCChHHHHHHHHHHHcCCeEEEEeCCchhHHHHHHHcCCCEEecCCCHHHHHHhcCCccEEEEcCCCc----
Q 018067          183 PGMHVGVVGLGGLGHVAVKFAKAMGVKVTVISTSPSKKSEAIERLGADSFLVSRDQDEMQAAMGTMDGIIDTVSAV----  258 (361)
Q Consensus       183 ~g~~vlV~Gag~vG~~a~~la~~~g~~vi~~~~~~~~~~~~~~~~g~~~vv~~~~~~~~~~~~~g~d~vid~~g~~----  258 (361)
                      .|++|.|+|.|.+|..+++.++.+|++|++.++....  ......|+..    .+   +.++....|+|+-++...    
T Consensus       175 ~gktvGIIGlG~IG~~vA~~l~~fG~~V~~~d~~~~~--~~~~~~g~~~----~~---l~ell~~aDvV~l~~Plt~~T~  245 (365)
T 4hy3_A          175 AGSEIGIVGFGDLGKALRRVLSGFRARIRVFDPWLPR--SMLEENGVEP----AS---LEDVLTKSDFIFVVAAVTSENK  245 (365)
T ss_dssp             SSSEEEEECCSHHHHHHHHHHTTSCCEEEEECSSSCH--HHHHHTTCEE----CC---HHHHHHSCSEEEECSCSSCC--
T ss_pred             CCCEEEEecCCcccHHHHHhhhhCCCEEEEECCCCCH--HHHhhcCeee----CC---HHHHHhcCCEEEEcCcCCHHHH
Confidence            5889999999999999999999999999999887532  2224567542    12   334455789998876643    


Q ss_pred             -ccHHHHHhccccCCEEEEecC
Q 018067          259 -HPLMPLIGLLKSQGKLVLVGA  279 (361)
Q Consensus       259 -~~~~~~~~~l~~~G~~v~~g~  279 (361)
                       ..-...+..+++++.+|.++.
T Consensus       246 ~li~~~~l~~mk~gailIN~aR  267 (365)
T 4hy3_A          246 RFLGAEAFSSMRRGAAFILLSR  267 (365)
T ss_dssp             -CCCHHHHHTSCTTCEEEECSC
T ss_pred             hhcCHHHHhcCCCCcEEEECcC
Confidence             112467788999999999983

>3pef_A 6-phosphogluconate dehydrogenase, NAD-binding; gamma-hydroxybutyrate dehydrogenase, succinic semialdehyde R geobacter metallireducens; HET: NAP; 2.07A {Geobacter metallireducens}

Probab=96.44  E-value=0.013  Score=51.85  Aligned_cols=88  Identities=19%  Similarity=0.225  Sum_probs=62.0

Q ss_pred             CEEEEEcCChHHHHHHHHHHHcCCeEEEEeCCchhHHHHHHHcCCCEEecCCCHHHHHHhcCCccEEEEcCCCcccHHHH
Q 018067          185 MHVGVVGLGGLGHVAVKFAKAMGVKVTVISTSPSKKSEAIERLGADSFLVSRDQDEMQAAMGTMDGIIDTVSAVHPLMPL  264 (361)
Q Consensus       185 ~~vlV~Gag~vG~~a~~la~~~g~~vi~~~~~~~~~~~~~~~~g~~~vv~~~~~~~~~~~~~g~d~vid~~g~~~~~~~~  264 (361)
                      .+|.|+|+|.+|...+..+...|.+|++.++++++.+.+. +.|+..   ..+.   .++....|+||.++..+..+...
T Consensus         2 ~~i~iIG~G~mG~~~a~~l~~~G~~V~~~dr~~~~~~~~~-~~g~~~---~~~~---~~~~~~aDvvi~~vp~~~~~~~v   74 (287)
T 3pef_A            2 QKFGFIGLGIMGSAMAKNLVKAGCSVTIWNRSPEKAEELA-ALGAER---AATP---CEVVESCPVTFAMLADPAAAEEV   74 (287)
T ss_dssp             CEEEEECCSHHHHHHHHHHHHTTCEEEEECSSGGGGHHHH-HTTCEE---CSSH---HHHHHHCSEEEECCSSHHHHHHH
T ss_pred             CEEEEEeecHHHHHHHHHHHHCCCeEEEEcCCHHHHHHHH-HCCCee---cCCH---HHHHhcCCEEEEEcCCHHHHHHH
Confidence            4789999999999999999999999999999988877774 456532   1221   12223479999999864324444


Q ss_pred             H-------hccccCCEEEEecC
Q 018067          265 I-------GLLKSQGKLVLVGA  279 (361)
Q Consensus       265 ~-------~~l~~~G~~v~~g~  279 (361)
                      +       ..++++..++..+.
T Consensus        75 ~~~~~~l~~~l~~~~~vi~~st   96 (287)
T 3pef_A           75 CFGKHGVLEGIGEGRGYVDMST   96 (287)
T ss_dssp             HHSTTCHHHHCCTTCEEEECSC
T ss_pred             HcCcchHhhcCCCCCEEEeCCC
Confidence            4       45566767777654

>4h15_A Short chain alcohol dehydrogenase-related dehydro; structural genomics, PSI-biology, nysgrc; HET: MSE; 1.45A {Sinorhizobium meliloti} PDB: 4h16_A*

Probab=96.44  E-value=0.0066  Score=53.07  Aligned_cols=71  Identities=15%  Similarity=0.174  Sum_probs=50.3

Q ss_pred             CCCEEEEEcC-ChHHHHHHHHHHHcCCeEEEEeCCchhHHHHHHHcCCCEEecCCCHHHHHHh-------cCCccEEEEc
Q 018067          183 PGMHVGVVGL-GGLGHVAVKFAKAMGVKVTVISTSPSKKSEAIERLGADSFLVSRDQDEMQAA-------MGTMDGIIDT  254 (361)
Q Consensus       183 ~g~~vlV~Ga-g~vG~~a~~la~~~g~~vi~~~~~~~~~~~~~~~~g~~~vv~~~~~~~~~~~-------~~g~d~vid~  254 (361)
                      +|+++||.|+ ++||.++++.+...|++|+++++++++.  +.+.+  ....|-.+++.+..+       .+++|+++++
T Consensus        10 ~GK~alVTGas~GIG~aia~~la~~Ga~V~~~~r~~~~~--~~~~~--~~~~Dv~~~~~v~~~~~~~~~~~G~iDilVnn   85 (261)
T 4h15_A           10 RGKRALITAGTKGAGAATVSLFLELGAQVLTTARARPEG--LPEEL--FVEADLTTKEGCAIVAEATRQRLGGVDVIVHM   85 (261)
T ss_dssp             TTCEEEESCCSSHHHHHHHHHHHHTTCEEEEEESSCCTT--SCTTT--EEECCTTSHHHHHHHHHHHHHHTSSCSEEEEC
T ss_pred             CCCEEEEeccCcHHHHHHHHHHHHcCCEEEEEECCchhC--CCcEE--EEEcCCCCHHHHHHHHHHHHHHcCCCCEEEEC
Confidence            7899999987 9999999999999999999999876531  11111  122345555433322       3579999999


Q ss_pred             CCC
Q 018067          255 VSA  257 (361)
Q Consensus       255 ~g~  257 (361)
                      +|.
T Consensus        86 AG~   88 (261)
T 4h15_A           86 LGG   88 (261)
T ss_dssp             CCC
T ss_pred             CCC
Confidence            874

>3u9l_A 3-oxoacyl-[acyl-carrier-protein] reductase; structural genomics, PSI-biology, NEW YORK structural genomi research consortium, nysgrc; 2.10A {Sinorhizobium meliloti}

Probab=96.44  E-value=0.012  Score=53.20  Aligned_cols=75  Identities=17%  Similarity=0.176  Sum_probs=50.5

Q ss_pred             CCCEEEEEcC-ChHHHHHHHHHHHcCCeEEEEeCCc-----hhHHHHH---HHcCCCE---EecCCCHHHHHHh------
Q 018067          183 PGMHVGVVGL-GGLGHVAVKFAKAMGVKVTVISTSP-----SKKSEAI---ERLGADS---FLVSRDQDEMQAA------  244 (361)
Q Consensus       183 ~g~~vlV~Ga-g~vG~~a~~la~~~g~~vi~~~~~~-----~~~~~~~---~~~g~~~---vv~~~~~~~~~~~------  244 (361)
                      .++++||.|+ |++|..+++.+...|++|++++++.     ++.+.+.   +..+...   ..|-.+++.+.++      
T Consensus         4 ~~k~vlVTGas~GIG~aia~~L~~~G~~V~~~~r~~~~r~~~~~~~l~~~~~~~~~~~~~~~~Dvtd~~~v~~~~~~~~~   83 (324)
T 3u9l_A            4 SKKIILITGASSGFGRLTAEALAGAGHRVYASMRDIVGRNASNVEAIAGFARDNDVDLRTLELDVQSQVSVDRAIDQIIG   83 (324)
T ss_dssp             -CCEEEESSCSSHHHHHHHHHHHHTTCEEEEEESCTTTTTHHHHHHHHHHHHHHTCCEEEEECCTTCHHHHHHHHHHHHH
T ss_pred             CCCEEEEECCCcHHHHHHHHHHHHCCCEEEEecCcccccCHHHHHHHHHHHHhcCCcEEEEEeecCCHHHHHHHHHHHHH
Confidence            3578999997 9999999999999999999887752     2223332   2334322   2345555443332      


Q ss_pred             -cCCccEEEEcCCC
Q 018067          245 -MGTMDGIIDTVSA  257 (361)
Q Consensus       245 -~~g~d~vid~~g~  257 (361)
                       .+++|++|+++|.
T Consensus        84 ~~g~iD~lVnnAG~   97 (324)
T 3u9l_A           84 EDGRIDVLIHNAGH   97 (324)
T ss_dssp             HHSCCSEEEECCCC
T ss_pred             HcCCCCEEEECCCc
Confidence             2489999999994

>1qyd_A Pinoresinol-lariciresinol reductase; NADPH-dependent aromatic alcohol reductases, pcber, PLR, IFR, lignans, isoflavonoids, plant protein; 2.50A {Thuja plicata} SCOP: c.2.1.2

Probab=96.43  E-value=0.016  Score=51.65  Aligned_cols=92  Identities=20%  Similarity=0.260  Sum_probs=62.6

Q ss_pred             CCEEEEEcC-ChHHHHHHHHHHHcCCeEEEEeCCc-----hhHHHHH--HHcCCCE-EecCCCHHHHHHhcCCccEEEEc
Q 018067          184 GMHVGVVGL-GGLGHVAVKFAKAMGVKVTVISTSP-----SKKSEAI--ERLGADS-FLVSRDQDEMQAAMGTMDGIIDT  254 (361)
Q Consensus       184 g~~vlV~Ga-g~vG~~a~~la~~~g~~vi~~~~~~-----~~~~~~~--~~~g~~~-vv~~~~~~~~~~~~~g~d~vid~  254 (361)
                      ..+|||+|+ |.+|..++..+...|.+|++++++.     ++...+.  +..++.. ..|..+++.+.++..++|+||.+
T Consensus         4 ~~~ilVtGatG~iG~~l~~~L~~~g~~V~~~~R~~~~~~~~~~~~~~~~~~~~~~~~~~D~~d~~~l~~~~~~~d~vi~~   83 (313)
T 1qyd_A            4 KSRVLIVGGTGYIGKRIVNASISLGHPTYVLFRPEVVSNIDKVQMLLYFKQLGAKLIEASLDDHQRLVDALKQVDVVISA   83 (313)
T ss_dssp             CCCEEEESTTSTTHHHHHHHHHHTTCCEEEECCSCCSSCHHHHHHHHHHHTTTCEEECCCSSCHHHHHHHHTTCSEEEEC
T ss_pred             CCEEEEEcCCcHHHHHHHHHHHhCCCcEEEEECCCcccchhHHHHHHHHHhCCeEEEeCCCCCHHHHHHHHhCCCEEEEC
Confidence            356999998 9999999999998999999999874     2322221  1224432 23566777777777899999999


Q ss_pred             CCCc------ccHHHHHhccccC---CEEE
Q 018067          255 VSAV------HPLMPLIGLLKSQ---GKLV  275 (361)
Q Consensus       255 ~g~~------~~~~~~~~~l~~~---G~~v  275 (361)
                      ++..      ......++.++..   ++++
T Consensus        84 a~~~~~~~~~~~~~~l~~aa~~~g~v~~~v  113 (313)
T 1qyd_A           84 LAGGVLSHHILEQLKLVEAIKEAGNIKRFL  113 (313)
T ss_dssp             CCCSSSSTTTTTHHHHHHHHHHSCCCSEEE
T ss_pred             CccccchhhHHHHHHHHHHHHhcCCCceEE
Confidence            8853      1233445555443   4776

>2dbq_A Glyoxylate reductase; D-3-phosphoglycerate dehydrogenase, ST genomics, NPPSFA; HET: NAP; 1.70A {Pyrococcus horikoshii} PDB: 2dbr_A* 2dbz_A*

Probab=96.43  E-value=0.012  Score=53.38  Aligned_cols=89  Identities=19%  Similarity=0.329  Sum_probs=65.2

Q ss_pred             CCCCEEEEEcCChHHHHHHHHHHHcCCeEEEEeCCchhHHHHHHHcCCCEEecCCCHHHHHHhcCCccEEEEcCCCcc--
Q 018067          182 KPGMHVGVVGLGGLGHVAVKFAKAMGVKVTVISTSPSKKSEAIERLGADSFLVSRDQDEMQAAMGTMDGIIDTVSAVH--  259 (361)
Q Consensus       182 ~~g~~vlV~Gag~vG~~a~~la~~~g~~vi~~~~~~~~~~~~~~~~g~~~vv~~~~~~~~~~~~~g~d~vid~~g~~~--  259 (361)
                      -.|.+|.|+|.|.+|...++.++..|.+|++.+++.++ . ..+++|+..    .+   +.++....|+|+.++....  
T Consensus       148 l~g~~vgIIG~G~iG~~iA~~l~~~G~~V~~~d~~~~~-~-~~~~~g~~~----~~---l~~~l~~aDvVil~vp~~~~t  218 (334)
T 2dbq_A          148 VYGKTIGIIGLGRIGQAIAKRAKGFNMRILYYSRTRKE-E-VERELNAEF----KP---LEDLLRESDFVVLAVPLTRET  218 (334)
T ss_dssp             CTTCEEEEECCSHHHHHHHHHHHHTTCEEEEECSSCCH-H-HHHHHCCEE----CC---HHHHHHHCSEEEECCCCCTTT
T ss_pred             CCCCEEEEEccCHHHHHHHHHHHhCCCEEEEECCCcch-h-hHhhcCccc----CC---HHHHHhhCCEEEECCCCChHH
Confidence            36789999999999999999999999999999988765 3 334566531    12   1223336899999887543  


Q ss_pred             --cH-HHHHhccccCCEEEEecC
Q 018067          260 --PL-MPLIGLLKSQGKLVLVGA  279 (361)
Q Consensus       260 --~~-~~~~~~l~~~G~~v~~g~  279 (361)
                        .+ ...+..++++..++.++.
T Consensus       219 ~~~i~~~~~~~mk~~ailIn~sr  241 (334)
T 2dbq_A          219 YHLINEERLKLMKKTAILINIAR  241 (334)
T ss_dssp             TTCBCHHHHHHSCTTCEEEECSC
T ss_pred             HHhhCHHHHhcCCCCcEEEECCC
Confidence              12 355678888888888874

>4hkt_A Inositol 2-dehydrogenase; structural genomics, nysgrc, PSI-biology, NEW YORK structura genomics research consortium, oxidoreductase; HET: MSE; 2.00A {Sinorhizobium meliloti}

Probab=96.43  E-value=0.06  Score=48.53  Aligned_cols=129  Identities=14%  Similarity=0.175  Sum_probs=80.0

Q ss_pred             EEEEEcCChHHHHHHHHHHHc-CCeEEE-EeCCchhHHHHHHHcCCCEEecCCCHHHHHHhcCCccEEEEcCCCcccHHH
Q 018067          186 HVGVVGLGGLGHVAVKFAKAM-GVKVTV-ISTSPSKKSEAIERLGADSFLVSRDQDEMQAAMGTMDGIIDTVSAVHPLMP  263 (361)
Q Consensus       186 ~vlV~Gag~vG~~a~~la~~~-g~~vi~-~~~~~~~~~~~~~~~g~~~vv~~~~~~~~~~~~~g~d~vid~~g~~~~~~~  263 (361)
                      +|.|+|+|.+|...+..++.. +++++. .++++++...+++++|+.    +.+.+.+.. ...+|+|+.++....-...
T Consensus         5 ~vgiiG~G~~g~~~~~~l~~~~~~~l~av~d~~~~~~~~~~~~~~~~----~~~~~~~l~-~~~~D~V~i~tp~~~h~~~   79 (331)
T 4hkt_A            5 RFGLLGAGRIGKVHAKAVSGNADARLVAVADAFPAAAEAIAGAYGCE----VRTIDAIEA-AADIDAVVICTPTDTHADL   79 (331)
T ss_dssp             EEEEECCSHHHHHHHHHHHHCTTEEEEEEECSSHHHHHHHHHHTTCE----ECCHHHHHH-CTTCCEEEECSCGGGHHHH
T ss_pred             EEEEECCCHHHHHHHHHHhhCCCcEEEEEECCCHHHHHHHHHHhCCC----cCCHHHHhc-CCCCCEEEEeCCchhHHHH
Confidence            688999999999888877775 778775 555666667777788865    333322211 2379999999987654666


Q ss_pred             HHhccccCCEEEEecCCCCCcccChHH------H-HhCCcEE-EecccCCHHHHHHHHHHHHcCCCce
Q 018067          264 LIGLLKSQGKLVLVGAPEKPLELPAFS------L-LMGRKIV-GGSMIGGMKETQEMIDFAAKHNIRA  323 (361)
Q Consensus       264 ~~~~l~~~G~~v~~g~~~~~~~~~~~~------~-~~~~~~i-~g~~~~~~~~~~~~~~ll~~~~~~~  323 (361)
                      +..+++.+ +-+++..+   ...+..+      . -.+++.+ .+........++.+.+++.+|.+-.
T Consensus        80 ~~~al~~g-k~v~~EKP---~~~~~~~~~~l~~~a~~~g~~~~v~~~~r~~p~~~~~~~~i~~g~iG~  143 (331)
T 4hkt_A           80 IERFARAG-KAIFCEKP---IDLDAERVRACLKVVSDTKAKLMVGFNRRFDPHFMAVRKAIDDGRIGE  143 (331)
T ss_dssp             HHHHHHTT-CEEEECSC---SCSSHHHHHHHHHHHHHTTCCEEECCGGGGCHHHHHHHHHHHTTTTCS
T ss_pred             HHHHHHcC-CcEEEecC---CCCCHHHHHHHHHHHHHcCCeEEEcccccCCHHHHHHHHHHHcCCCCc
Confidence            77776665 55556432   2222221      1 1233333 3433333455777778888877653

>2et6_A (3R)-hydroxyacyl-COA dehydrogenase; MFE-2, beta-oxidation, peroxisome, SDR, oxido; 2.22A {Candida tropicalis}

Probab=96.42  E-value=0.025  Score=55.59  Aligned_cols=98  Identities=18%  Similarity=0.297  Sum_probs=62.8

Q ss_pred             CCCEEEEEcC-ChHHHHHHHHHHHcCCeEEEEeCC-chhHHHHHHHcCCCEEecCCCH-HH----HHHh---cCCccEEE
Q 018067          183 PGMHVGVVGL-GGLGHVAVKFAKAMGVKVTVISTS-PSKKSEAIERLGADSFLVSRDQ-DE----MQAA---MGTMDGII  252 (361)
Q Consensus       183 ~g~~vlV~Ga-g~vG~~a~~la~~~g~~vi~~~~~-~~~~~~~~~~~g~~~vv~~~~~-~~----~~~~---~~g~d~vi  252 (361)
                      .|+++||.|+ +++|.+.++.+...|++|++.++. .++.....++.|...+....+. +.    +.++   .+++|++|
T Consensus       321 ~gkvalVTGas~GIG~a~A~~la~~Ga~Vv~~~~~~~~~~~~~i~~~g~~~~~~~~Dv~~~~~~~~~~~~~~~G~iDiLV  400 (604)
T 2et6_A          321 KDKVVLITGAGAGLGKEYAKWFAKYGAKVVVNDFKDATKTVDEIKAAGGEAWPDQHDVAKDSEAIIKNVIDKYGTIDILV  400 (604)
T ss_dssp             TTCEEEESSCSSHHHHHHHHHHHHTTCEEEEECSSCCHHHHHHHHHTTCEEEEECCCHHHHHHHHHHHHHHHHSCCCEEE
T ss_pred             CCCeEEEECcchHHHHHHHHHHHHCCCEEEEEeCccHHHHHHHHHhcCCeEEEEEcChHHHHHHHHHHHHHhcCCCCEEE
Confidence            4678899987 999999999999999999988743 2322222244455443333333 21    2222   25799999


Q ss_pred             EcCCCcc-------------------------cHHHHHhccc--cCCEEEEecCC
Q 018067          253 DTVSAVH-------------------------PLMPLIGLLK--SQGKLVLVGAP  280 (361)
Q Consensus       253 d~~g~~~-------------------------~~~~~~~~l~--~~G~~v~~g~~  280 (361)
                      +++|...                         ..+.++..++  .+|++|.+++.
T Consensus       401 nNAGi~~~~~~~~~~~~~~~~~~~vNl~g~~~~~~~~~p~m~~~~~G~IVnisS~  455 (604)
T 2et6_A          401 NNAGILRDRSFAKMSKQEWDSVQQVHLIGTFNLSRLAWPYFVEKQFGRIINITST  455 (604)
T ss_dssp             ECCCCCCCBCTTTCCHHHHHHHHHHHTHHHHHHHHHHHHHHHHTTCEEEEEECCH
T ss_pred             ECCCCCCCCChhhCCHHHHHHHHHHHhHHHHHHHHHHHHHHHHcCCCEEEEECCh
Confidence            9998421                         2233455553  46899999863

>2wm3_A NMRA-like family domain containing protein 1; unknown function; HET: NAP NFL; 1.85A {Homo sapiens} PDB: 2wmd_A* 2exx_A* 3dxf_A 3e5m_A

Probab=96.42  E-value=0.017  Score=51.24  Aligned_cols=96  Identities=23%  Similarity=0.174  Sum_probs=65.4

Q ss_pred             CCEEEEEcC-ChHHHHHHHHHHHcC-CeEEEEeCCchhHH-HHHHHcCCCE-EecCCCHHHHHHhcCCccEEEEcCCCcc
Q 018067          184 GMHVGVVGL-GGLGHVAVKFAKAMG-VKVTVISTSPSKKS-EAIERLGADS-FLVSRDQDEMQAAMGTMDGIIDTVSAVH  259 (361)
Q Consensus       184 g~~vlV~Ga-g~vG~~a~~la~~~g-~~vi~~~~~~~~~~-~~~~~~g~~~-vv~~~~~~~~~~~~~g~d~vid~~g~~~  259 (361)
                      ..+|||+|+ |.+|..+++.+...| .+|++++++.++.. ......++.. ..|..+++.+..+..++|+||.+++...
T Consensus         5 ~~~ilVtGatG~iG~~l~~~L~~~g~~~V~~~~R~~~~~~~~~l~~~~~~~~~~D~~d~~~l~~~~~~~d~vi~~a~~~~   84 (299)
T 2wm3_A            5 KKLVVVFGGTGAQGGSVARTLLEDGTFKVRVVTRNPRKKAAKELRLQGAEVVQGDQDDQVIMELALNGAYATFIVTNYWE   84 (299)
T ss_dssp             CCEEEEETTTSHHHHHHHHHHHHHCSSEEEEEESCTTSHHHHHHHHTTCEEEECCTTCHHHHHHHHTTCSEEEECCCHHH
T ss_pred             CCEEEEECCCchHHHHHHHHHHhcCCceEEEEEcCCCCHHHHHHHHCCCEEEEecCCCHHHHHHHHhcCCEEEEeCCCCc
Confidence            468999998 999999999888888 89999999876531 1112345543 2366677777777789999999987421


Q ss_pred             ---------cHHHHHhcccc--CCEEEEecC
Q 018067          260 ---------PLMPLIGLLKS--QGKLVLVGA  279 (361)
Q Consensus       260 ---------~~~~~~~~l~~--~G~~v~~g~  279 (361)
                               .....++.++.  -++++..+.
T Consensus        85 ~~~~~~~~~~~~~~~~aa~~~gv~~iv~~S~  115 (299)
T 2wm3_A           85 SCSQEQEVKQGKLLADLARRLGLHYVVYSGL  115 (299)
T ss_dssp             HTCHHHHHHHHHHHHHHHHHHTCSEEEECCC
T ss_pred             cccchHHHHHHHHHHHHHHHcCCCEEEEEcC
Confidence                     12233444433  357887654

>3u0b_A Oxidoreductase, short chain dehydrogenase/reducta protein; structural genomics, ssgcid; 1.70A {Mycobacterium smegmatis} PDB: 3lls_A 3v1t_C 3v1u_A* 4fw8_A* 3q6i_A* 3m1l_A

Probab=96.42  E-value=0.023  Score=53.80  Aligned_cols=75  Identities=17%  Similarity=0.280  Sum_probs=52.1

Q ss_pred             CCCEEEEEcC-ChHHHHHHHHHHHcCCeEEEEeCCc--hhHHHHHHHcCCCE-EecCCCHHHHHH-------hcCC-ccE
Q 018067          183 PGMHVGVVGL-GGLGHVAVKFAKAMGVKVTVISTSP--SKKSEAIERLGADS-FLVSRDQDEMQA-------AMGT-MDG  250 (361)
Q Consensus       183 ~g~~vlV~Ga-g~vG~~a~~la~~~g~~vi~~~~~~--~~~~~~~~~~g~~~-vv~~~~~~~~~~-------~~~g-~d~  250 (361)
                      +++++||.|+ |++|..+++.+...|++|++++++.  ++..+..++.+... ..|-.+.+.+.+       ..++ +|+
T Consensus       212 ~gk~~LVTGgsgGIG~aiA~~La~~Ga~Vvl~~r~~~~~~l~~~~~~~~~~~~~~Dvtd~~~v~~~~~~~~~~~g~~id~  291 (454)
T 3u0b_A          212 DGKVAVVTGAARGIGATIAEVFARDGATVVAIDVDGAAEDLKRVADKVGGTALTLDVTADDAVDKITAHVTEHHGGKVDI  291 (454)
T ss_dssp             TTCEEEESSCSSHHHHHHHHHHHHTTCEEEEEECGGGHHHHHHHHHHHTCEEEECCTTSTTHHHHHHHHHHHHSTTCCSE
T ss_pred             CCCEEEEeCCchHHHHHHHHHHHHCCCEEEEEeCCccHHHHHHHHHHcCCeEEEEecCCHHHHHHHHHHHHHHcCCCceE
Confidence            5788999987 9999999999988999999988754  23344445556542 234444433222       2234 999


Q ss_pred             EEEcCCC
Q 018067          251 IIDTVSA  257 (361)
Q Consensus       251 vid~~g~  257 (361)
                      +|+++|.
T Consensus       292 lV~nAGv  298 (454)
T 3u0b_A          292 LVNNAGI  298 (454)
T ss_dssp             EEECCCC
T ss_pred             EEECCcc
Confidence            9999985

>2nyu_A Putative ribosomal RNA methyltransferase 2; SAM, structural genomics, structural genomics consortium, SGC; HET: SAM; 1.76A {Homo sapiens}

Probab=96.40  E-value=0.001  Score=55.10  Aligned_cols=96  Identities=17%  Similarity=0.072  Sum_probs=62.4

Q ss_pred             hcCCCCCCCEEEEEcCChHHHHHHHHHHHcC----------CeEEEEeCCchhHHHHHHHcCCCEEe-c--CCCHHHH--
Q 018067          177 FYGLDKPGMHVGVVGLGGLGHVAVKFAKAMG----------VKVTVISTSPSKKSEAIERLGADSFL-V--SRDQDEM--  241 (361)
Q Consensus       177 ~~~~~~~g~~vlV~Gag~vG~~a~~la~~~g----------~~vi~~~~~~~~~~~~~~~~g~~~vv-~--~~~~~~~--  241 (361)
                      ....++++++||.+|+|. |..+..+++..+          .+|+.++.++....     -++ ..+ .  ..+.+..  
T Consensus        16 ~~~~~~~~~~vLDlGcG~-G~~~~~la~~~~~~~~~~~~~~~~v~~vD~s~~~~~-----~~~-~~~~~~d~~~~~~~~~   88 (196)
T 2nyu_A           16 RHQILRPGLRVLDCGAAP-GAWSQVAVQKVNAAGTDPSSPVGFVLGVDLLHIFPL-----EGA-TFLCPADVTDPRTSQR   88 (196)
T ss_dssp             HHCCCCTTCEEEEETCCS-CHHHHHHHHHTTTTCCCTTSCCCEEEEECSSCCCCC-----TTC-EEECSCCTTSHHHHHH
T ss_pred             hcCCCCCCCEEEEeCCCC-CHHHHHHHHHhccccccccCCCceEEEEechhcccC-----CCC-eEEEeccCCCHHHHHH
Confidence            344468899999999988 999999999876          68999988764310     012 222 1  1122211  


Q ss_pred             -HH-hc-CCccEEEE-----cCCCc------------ccHHHHHhccccCCEEEEecC
Q 018067          242 -QA-AM-GTMDGIID-----TVSAV------------HPLMPLIGLLKSQGKLVLVGA  279 (361)
Q Consensus       242 -~~-~~-~g~d~vid-----~~g~~------------~~~~~~~~~l~~~G~~v~~g~  279 (361)
                       .. .. +.+|+|+.     +.+..            ..+..+.+.|+++|+++..-.
T Consensus        89 ~~~~~~~~~fD~V~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~LkpgG~lv~~~~  146 (196)
T 2nyu_A           89 ILEVLPGRRADVILSDMAPNATGFRDLDHDRLISLCLTLLSVTPDILQPGGTFLCKTW  146 (196)
T ss_dssp             HHHHSGGGCEEEEEECCCCCCCSCHHHHHHHHHHHHHHHHHHHHHHEEEEEEEEEEEC
T ss_pred             HHHhcCCCCCcEEEeCCCCCCCCCcccCHHHHHHHHHHHHHHHHHHhcCCCEEEEEec
Confidence             11 22 37999984     33332            346678899999999988643

>3vtz_A Glucose 1-dehydrogenase; rossmann fold, oxidoreductase, NAD binding; 2.30A {Thermoplasma volcanium}

Probab=96.40  E-value=0.0053  Score=53.85  Aligned_cols=72  Identities=19%  Similarity=0.256  Sum_probs=51.5

Q ss_pred             CCCCCEEEEEcC-ChHHHHHHHHHHHcCCeEEEEeCCchhHHHHHHHcCCC-EEecCCCHHHHHHh-------cCCccEE
Q 018067          181 DKPGMHVGVVGL-GGLGHVAVKFAKAMGVKVTVISTSPSKKSEAIERLGAD-SFLVSRDQDEMQAA-------MGTMDGI  251 (361)
Q Consensus       181 ~~~g~~vlV~Ga-g~vG~~a~~la~~~g~~vi~~~~~~~~~~~~~~~~g~~-~vv~~~~~~~~~~~-------~~g~d~v  251 (361)
                      ...|++|||.|+ |++|.++++.+...|++|++++++.+....     ... ...|-.+++.+.++       .+++|++
T Consensus        11 ~~~~k~vlVTGas~GIG~aia~~l~~~G~~V~~~~r~~~~~~~-----~~~~~~~Dv~~~~~v~~~~~~~~~~~g~iD~l   85 (269)
T 3vtz_A           11 EFTDKVAIVTGGSSGIGLAVVDALVRYGAKVVSVSLDEKSDVN-----VSDHFKIDVTNEEEVKEAVEKTTKKYGRIDIL   85 (269)
T ss_dssp             TTTTCEEEESSTTSHHHHHHHHHHHHTTCEEEEEESCC--CTT-----SSEEEECCTTCHHHHHHHHHHHHHHHSCCCEE
T ss_pred             CCCCCEEEEeCCCCHHHHHHHHHHHHCCCEEEEEeCCchhccC-----ceeEEEecCCCHHHHHHHHHHHHHHcCCCCEE
Confidence            357899999997 999999999999999999999988654311     121 22355665544332       2489999


Q ss_pred             EEcCCC
Q 018067          252 IDTVSA  257 (361)
Q Consensus       252 id~~g~  257 (361)
                      |+++|.
T Consensus        86 v~nAg~   91 (269)
T 3vtz_A           86 VNNAGI   91 (269)
T ss_dssp             EECCCC
T ss_pred             EECCCc
Confidence            999985

>4dll_A 2-hydroxy-3-oxopropionate reductase; structural genomics, PSI-biology, NEW YORK structural genomi research consortium, nysgrc, oxidoreductase; 2.11A {Polaromonas SP}

Probab=96.40  E-value=0.019  Score=51.74  Aligned_cols=91  Identities=14%  Similarity=0.216  Sum_probs=65.0

Q ss_pred             CCCEEEEEcCChHHHHHHHHHHHcCCeEEEEeCCchhHHHHHHHcCCCEEecCCCHHHHHHhcCCccEEEEcCCCcccHH
Q 018067          183 PGMHVGVVGLGGLGHVAVKFAKAMGVKVTVISTSPSKKSEAIERLGADSFLVSRDQDEMQAAMGTMDGIIDTVSAVHPLM  262 (361)
Q Consensus       183 ~g~~vlV~Gag~vG~~a~~la~~~g~~vi~~~~~~~~~~~~~~~~g~~~vv~~~~~~~~~~~~~g~d~vid~~g~~~~~~  262 (361)
                      ...+|.|+|.|.+|...++.+...|.+|++.++++++.+.+. +.|+...   .+   ..++....|+||-++..+..+.
T Consensus        30 ~~~~I~iIG~G~mG~~~a~~l~~~G~~V~~~dr~~~~~~~l~-~~g~~~~---~~---~~e~~~~aDvVi~~vp~~~~~~  102 (320)
T 4dll_A           30 YARKITFLGTGSMGLPMARRLCEAGYALQVWNRTPARAASLA-ALGATIH---EQ---ARAAARDADIVVSMLENGAVVQ  102 (320)
T ss_dssp             CCSEEEEECCTTTHHHHHHHHHHTTCEEEEECSCHHHHHHHH-TTTCEEE---SS---HHHHHTTCSEEEECCSSHHHHH
T ss_pred             CCCEEEEECccHHHHHHHHHHHhCCCeEEEEcCCHHHHHHHH-HCCCEee---CC---HHHHHhcCCEEEEECCCHHHHH
Confidence            345899999999999999999999999999999988877764 4465321   12   2234457899999998754344


Q ss_pred             HHH------hccccCCEEEEecCC
Q 018067          263 PLI------GLLKSQGKLVLVGAP  280 (361)
Q Consensus       263 ~~~------~~l~~~G~~v~~g~~  280 (361)
                      ..+      ..++++..++.++..
T Consensus       103 ~v~~~~~~~~~l~~~~~vi~~st~  126 (320)
T 4dll_A          103 DVLFAQGVAAAMKPGSLFLDMASI  126 (320)
T ss_dssp             HHHTTTCHHHHCCTTCEEEECSCC
T ss_pred             HHHcchhHHhhCCCCCEEEecCCC
Confidence            444      245677777777653

>3g0o_A 3-hydroxyisobutyrate dehydrogenase; NAD(P), valine catabolism, tartaric acid, target 11128H, NYSGXRC, PSI-2, structural genomics; HET: TLA; 1.80A {Salmonella typhimurium}

Probab=96.38  E-value=0.037  Score=49.29  Aligned_cols=89  Identities=21%  Similarity=0.311  Sum_probs=63.3

Q ss_pred             CEEEEEcCChHHHHHHHHHHHcCCeEEEEeCCchhHHHHHHHcCCCEEecCCCHHHHHHhcCCccEEEEcCCCcccHHHH
Q 018067          185 MHVGVVGLGGLGHVAVKFAKAMGVKVTVISTSPSKKSEAIERLGADSFLVSRDQDEMQAAMGTMDGIIDTVSAVHPLMPL  264 (361)
Q Consensus       185 ~~vlV~Gag~vG~~a~~la~~~g~~vi~~~~~~~~~~~~~~~~g~~~vv~~~~~~~~~~~~~g~d~vid~~g~~~~~~~~  264 (361)
                      .+|.|+|.|.+|...+..+...|.+|++.++++++.+.+ .+.|....... .    .++....|+||-++..+..+...
T Consensus         8 ~~I~iIG~G~mG~~~a~~l~~~G~~V~~~dr~~~~~~~~-~~~g~~~~~~~-~----~e~~~~aDvvi~~vp~~~~~~~v   81 (303)
T 3g0o_A            8 FHVGIVGLGSMGMGAARSCLRAGLSTWGADLNPQACANL-LAEGACGAAAS-A----REFAGVVDALVILVVNAAQVRQV   81 (303)
T ss_dssp             CEEEEECCSHHHHHHHHHHHHTTCEEEEECSCHHHHHHH-HHTTCSEEESS-S----TTTTTTCSEEEECCSSHHHHHHH
T ss_pred             CeEEEECCCHHHHHHHHHHHHCCCeEEEEECCHHHHHHH-HHcCCccccCC-H----HHHHhcCCEEEEECCCHHHHHHH
Confidence            579999999999999999999999999999998887777 45576541111 1    12334689999999875434544


Q ss_pred             H-------hccccCCEEEEecC
Q 018067          265 I-------GLLKSQGKLVLVGA  279 (361)
Q Consensus       265 ~-------~~l~~~G~~v~~g~  279 (361)
                      +       ..++++..++..+.
T Consensus        82 ~~~~~~l~~~l~~g~ivv~~st  103 (303)
T 3g0o_A           82 LFGEDGVAHLMKPGSAVMVSST  103 (303)
T ss_dssp             HC--CCCGGGSCTTCEEEECSC
T ss_pred             HhChhhHHhhCCCCCEEEecCC
Confidence            3       34556666766654

>2x4g_A Nucleoside-diphosphate-sugar epimerase; isomerase; 2.65A {Pseudomonas aeruginosa}

Probab=96.38  E-value=0.0079  Score=54.34  Aligned_cols=72  Identities=24%  Similarity=0.352  Sum_probs=52.7

Q ss_pred             CEEEEEcC-ChHHHHHHHHHHHcCCeEEEEeCCchhHHHHHHHcCCCE-EecCCCHHHHHHhcCCccEEEEcCCC
Q 018067          185 MHVGVVGL-GGLGHVAVKFAKAMGVKVTVISTSPSKKSEAIERLGADS-FLVSRDQDEMQAAMGTMDGIIDTVSA  257 (361)
Q Consensus       185 ~~vlV~Ga-g~vG~~a~~la~~~g~~vi~~~~~~~~~~~~~~~~g~~~-vv~~~~~~~~~~~~~g~d~vid~~g~  257 (361)
                      -+|||+|+ |.+|...++.+...|.+|++++++.++...+ ...++.. ..|..+.+.+.++..++|+||++++.
T Consensus        14 M~ilVtGatG~iG~~l~~~L~~~g~~V~~~~r~~~~~~~l-~~~~~~~~~~Dl~d~~~~~~~~~~~d~vih~a~~   87 (342)
T 2x4g_A           14 VKYAVLGATGLLGHHAARAIRAAGHDLVLIHRPSSQIQRL-AYLEPECRVAEMLDHAGLERALRGLDGVIFSAGY   87 (342)
T ss_dssp             CEEEEESTTSHHHHHHHHHHHHTTCEEEEEECTTSCGGGG-GGGCCEEEECCTTCHHHHHHHTTTCSEEEEC---
T ss_pred             CEEEEECCCcHHHHHHHHHHHHCCCEEEEEecChHhhhhh-ccCCeEEEEecCCCHHHHHHHHcCCCEEEECCcc
Confidence            47999998 9999999999999999999999887654333 2224432 23556677777777799999999884

>1xgk_A Nitrogen metabolite repression regulator NMRA; rossmann fold, transcriptional regulation, short chain dehyd reductase, NADP binding; 1.40A {Emericella nidulans} SCOP: c.2.1.2 PDB: 1k6x_A* 1k6j_A 1k6i_A* 1ti7_A* 2vus_A 2vut_A* 2vuu_A*

Probab=96.38  E-value=0.013  Score=53.43  Aligned_cols=96  Identities=16%  Similarity=0.092  Sum_probs=65.0

Q ss_pred             CCEEEEEcC-ChHHHHHHHHHHHcCCeEEEEeCCchhH--HHHHHHc-CCCE-Eec-CCCHHHHHHhcCCccEEEEcCCC
Q 018067          184 GMHVGVVGL-GGLGHVAVKFAKAMGVKVTVISTSPSKK--SEAIERL-GADS-FLV-SRDQDEMQAAMGTMDGIIDTVSA  257 (361)
Q Consensus       184 g~~vlV~Ga-g~vG~~a~~la~~~g~~vi~~~~~~~~~--~~~~~~~-g~~~-vv~-~~~~~~~~~~~~g~d~vid~~g~  257 (361)
                      +.+|||+|+ |.+|...++.+...|.+|++++++.++.  ..+ ... ++.. ..| ..+++.+.++..++|+||.+++.
T Consensus         5 ~~~ilVtGatG~iG~~l~~~L~~~g~~V~~~~R~~~~~~~~~l-~~~~~v~~v~~D~l~d~~~l~~~~~~~d~Vi~~a~~   83 (352)
T 1xgk_A            5 KKTIAVVGATGRQGASLIRVAAAVGHHVRAQVHSLKGLIAEEL-QAIPNVTLFQGPLLNNVPLMDTLFEGAHLAFINTTS   83 (352)
T ss_dssp             CCCEEEESTTSHHHHHHHHHHHHTTCCEEEEESCSCSHHHHHH-HTSTTEEEEESCCTTCHHHHHHHHTTCSEEEECCCS
T ss_pred             CCEEEEECCCCHHHHHHHHHHHhCCCEEEEEECCCChhhHHHH-hhcCCcEEEECCccCCHHHHHHHHhcCCEEEEcCCC
Confidence            467999998 9999999998888899999999887654  223 222 3322 235 55777777777889999987764


Q ss_pred             c-----ccHHHHHhcccc-C--CEEEEecCC
Q 018067          258 V-----HPLMPLIGLLKS-Q--GKLVLVGAP  280 (361)
Q Consensus       258 ~-----~~~~~~~~~l~~-~--G~~v~~g~~  280 (361)
                      .     ......++.++. +  +++|.+++.
T Consensus        84 ~~~~~~~~~~~l~~aa~~~g~v~~~V~~SS~  114 (352)
T 1xgk_A           84 QAGDEIAIGKDLADAAKRAGTIQHYIYSSMP  114 (352)
T ss_dssp             TTSCHHHHHHHHHHHHHHHSCCSEEEEEECC
T ss_pred             CCcHHHHHHHHHHHHHHHcCCccEEEEeCCc
Confidence            3     111233444433 3  589988764

>2nxc_A L11 mtase, ribosomal protein L11 methyltransferase; transferase S-adenosly-L-methionine dependent methyltransfer posttranslational modification; 1.59A {Thermus thermophilus} SCOP: c.66.1.39 PDB: 1ufk_A 2nxe_A* 2nxj_A 2nxn_A 2zbp_A* 2zbq_A* 2zbr_A* 3cjq_A* 3cjr_A* 3cju_A* 3egv_A* 3cjt_A*

Probab=96.37  E-value=0.0068  Score=52.69  Aligned_cols=125  Identities=22%  Similarity=0.231  Sum_probs=72.9

Q ss_pred             CCceEECCCCCCcccccccchhhhhhhhHhhhcCCCCCCCEEEEEcCChHHHHHHHHHHHcCCeEEEEeCCchhHHHHHH
Q 018067          146 EHFVVRIPEGTPLDATAPLLCAGITVYSPLRFYGLDKPGMHVGVVGLGGLGHVAVKFAKAMGVKVTVISTSPSKKSEAIE  225 (361)
Q Consensus       146 ~~~~~~ip~~~~~~~aa~l~~~~~ta~~~l~~~~~~~~g~~vlV~Gag~vG~~a~~la~~~g~~vi~~~~~~~~~~~~~~  225 (361)
                      ....+.+++++.+.....-. . ......+...  ++++++||-+|+|. |..++.+++ .|++|+.++.++.....+.+
T Consensus        87 ~~~~~~l~p~~~fgtg~~~t-t-~~~~~~l~~~--~~~~~~VLDiGcG~-G~l~~~la~-~g~~v~gvDi~~~~v~~a~~  160 (254)
T 2nxc_A           87 AEIPLVIEPGMAFGTGHHET-T-RLALKALARH--LRPGDKVLDLGTGS-GVLAIAAEK-LGGKALGVDIDPMVLPQAEA  160 (254)
T ss_dssp             SSEEEECCCC-----CCSHH-H-HHHHHHHHHH--CCTTCEEEEETCTT-SHHHHHHHH-TTCEEEEEESCGGGHHHHHH
T ss_pred             CceEEEECCCccccCCCCHH-H-HHHHHHHHHh--cCCCCEEEEecCCC-cHHHHHHHH-hCCeEEEEECCHHHHHHHHH
Confidence            34567777777665533211 1 1112334433  47899999999876 777777776 46799999998876554433


Q ss_pred             ---HcCCC-EEecCCCHHHHHHh-cCCccEEEEcCCC---cccHHHHHhccccCCEEEEecC
Q 018067          226 ---RLGAD-SFLVSRDQDEMQAA-MGTMDGIIDTVSA---VHPLMPLIGLLKSQGKLVLVGA  279 (361)
Q Consensus       226 ---~~g~~-~vv~~~~~~~~~~~-~~g~d~vid~~g~---~~~~~~~~~~l~~~G~~v~~g~  279 (361)
                         ..+.. .++. .+  ....+ .+.+|+|+.+.-.   ...+..+.+.|+++|+++..+.
T Consensus       161 n~~~~~~~v~~~~-~d--~~~~~~~~~fD~Vv~n~~~~~~~~~l~~~~~~LkpgG~lils~~  219 (254)
T 2nxc_A          161 NAKRNGVRPRFLE-GS--LEAALPFGPFDLLVANLYAELHAALAPRYREALVPGGRALLTGI  219 (254)
T ss_dssp             HHHHTTCCCEEEE-SC--HHHHGGGCCEEEEEEECCHHHHHHHHHHHHHHEEEEEEEEEEEE
T ss_pred             HHHHcCCcEEEEE-CC--hhhcCcCCCCCEEEECCcHHHHHHHHHHHHHHcCCCCEEEEEee
Confidence               23432 2221 22  11123 3579999865432   1235667889999999998754

>3qlj_A Short chain dehydrogenase; structural genomics, seattle structural genomics center for infectious disease, ssgcid, tuberculosis; 1.80A {Mycobacterium avium}

Probab=96.36  E-value=0.012  Score=53.00  Aligned_cols=76  Identities=22%  Similarity=0.329  Sum_probs=52.7

Q ss_pred             CCCCEEEEEcC-ChHHHHHHHHHHHcCCeEEEEeCC----------chhHHHHHHH---cCCCEE---ecCCCHHHHHHh
Q 018067          182 KPGMHVGVVGL-GGLGHVAVKFAKAMGVKVTVISTS----------PSKKSEAIER---LGADSF---LVSRDQDEMQAA  244 (361)
Q Consensus       182 ~~g~~vlV~Ga-g~vG~~a~~la~~~g~~vi~~~~~----------~~~~~~~~~~---~g~~~v---v~~~~~~~~~~~  244 (361)
                      -.|+++||.|+ |++|.+++..+...|++|++++++          .++...+.++   .+....   .|..+.+.+.++
T Consensus        25 l~gk~vlVTGas~GIG~aia~~la~~G~~Vv~~~r~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~Dv~d~~~v~~~  104 (322)
T 3qlj_A           25 VDGRVVIVTGAGGGIGRAHALAFAAEGARVVVNDIGVGLDGSPASGGSAAQSVVDEITAAGGEAVADGSNVADWDQAAGL  104 (322)
T ss_dssp             TTTCEEEETTTTSHHHHHHHHHHHHTTCEEEEECCCBCTTSSBTCTTSHHHHHHHHHHHTTCEEEEECCCTTSHHHHHHH
T ss_pred             cCCCEEEEECCCcHHHHHHHHHHHHCCCEEEEEeCcccccccccccHHHHHHHHHHHHhcCCcEEEEECCCCCHHHHHHH
Confidence            35788999987 999999999999999999999876          4444444333   343322   244454443332


Q ss_pred             -------cCCccEEEEcCCC
Q 018067          245 -------MGTMDGIIDTVSA  257 (361)
Q Consensus       245 -------~~g~d~vid~~g~  257 (361)
                             .+++|++|+++|.
T Consensus       105 ~~~~~~~~g~iD~lv~nAg~  124 (322)
T 3qlj_A          105 IQTAVETFGGLDVLVNNAGI  124 (322)
T ss_dssp             HHHHHHHHSCCCEEECCCCC
T ss_pred             HHHHHHHcCCCCEEEECCCC
Confidence                   2489999999985

>1mx3_A CTBP1, C-terminal binding protein 1; nuclear protein, phosphorylation, transcriptional corepresso transcription repressor; HET: NAD; 1.95A {Homo sapiens} SCOP: c.2.1.4 c.23.12.1 PDB: 1hku_A* 1hl3_A* 2hu2_A* 3ga0_A 2ome_A*

Probab=96.36  E-value=0.0089  Score=54.48  Aligned_cols=91  Identities=21%  Similarity=0.228  Sum_probs=64.8

Q ss_pred             CCCCEEEEEcCChHHHHHHHHHHHcCCeEEEEeCCchhHHHHHHHcCCCEEecCCCHHHHHHhcCCccEEEEcCCCc---
Q 018067          182 KPGMHVGVVGLGGLGHVAVKFAKAMGVKVTVISTSPSKKSEAIERLGADSFLVSRDQDEMQAAMGTMDGIIDTVSAV---  258 (361)
Q Consensus       182 ~~g~~vlV~Gag~vG~~a~~la~~~g~~vi~~~~~~~~~~~~~~~~g~~~vv~~~~~~~~~~~~~g~d~vid~~g~~---  258 (361)
                      -.|.+|.|+|.|.+|...++.++.+|++|++.++..++.  ..+.+|+..+   .+   +.++....|+|+-++...   
T Consensus       166 l~g~tvGIIG~G~IG~~vA~~l~~~G~~V~~~d~~~~~~--~~~~~g~~~~---~~---l~ell~~aDvV~l~~P~t~~t  237 (347)
T 1mx3_A          166 IRGETLGIIGLGRVGQAVALRAKAFGFNVLFYDPYLSDG--VERALGLQRV---ST---LQDLLFHSDCVTLHCGLNEHN  237 (347)
T ss_dssp             CTTCEEEEECCSHHHHHHHHHHHTTTCEEEEECTTSCTT--HHHHHTCEEC---SS---HHHHHHHCSEEEECCCCCTTC
T ss_pred             CCCCEEEEEeECHHHHHHHHHHHHCCCEEEEECCCcchh--hHhhcCCeec---CC---HHHHHhcCCEEEEcCCCCHHH
Confidence            368899999999999999999999999999988765542  2245676421   12   223333589998877642   


Q ss_pred             -ccH-HHHHhccccCCEEEEecCC
Q 018067          259 -HPL-MPLIGLLKSQGKLVLVGAP  280 (361)
Q Consensus       259 -~~~-~~~~~~l~~~G~~v~~g~~  280 (361)
                       ..+ ...+..++++..++.++..
T Consensus       238 ~~li~~~~l~~mk~gailIN~arg  261 (347)
T 1mx3_A          238 HHLINDFTVKQMRQGAFLVNTARG  261 (347)
T ss_dssp             TTSBSHHHHTTSCTTEEEEECSCT
T ss_pred             HHHhHHHHHhcCCCCCEEEECCCC
Confidence             112 4567788888888888753

>4id9_A Short-chain dehydrogenase/reductase; putative dehydrogenase, enzyme function initiative, EFI, STR genomics, oxidoreductase; HET: NAD; 1.60A {Agrobacterium fabrum} PDB: 4idg_A*

Probab=96.35  E-value=0.01  Score=53.82  Aligned_cols=69  Identities=17%  Similarity=0.233  Sum_probs=52.8

Q ss_pred             CCCCEEEEEcC-ChHHHHHHHHHHHcCCeEEEEeCCchhHHHHHHHcCCCE-EecCCCHHHHHHhcCCccEEEEcCCC
Q 018067          182 KPGMHVGVVGL-GGLGHVAVKFAKAMGVKVTVISTSPSKKSEAIERLGADS-FLVSRDQDEMQAAMGTMDGIIDTVSA  257 (361)
Q Consensus       182 ~~g~~vlV~Ga-g~vG~~a~~la~~~g~~vi~~~~~~~~~~~~~~~~g~~~-vv~~~~~~~~~~~~~g~d~vid~~g~  257 (361)
                      .++.+|||+|+ |.+|..+++.+...|.+|+++++..++       .+... ..|..+.+.+.++..++|+||.+++.
T Consensus        17 ~~~~~vlVtGatG~iG~~l~~~L~~~G~~V~~~~r~~~~-------~~~~~~~~Dl~d~~~~~~~~~~~d~vih~A~~   87 (347)
T 4id9_A           17 RGSHMILVTGSAGRVGRAVVAALRTQGRTVRGFDLRPSG-------TGGEEVVGSLEDGQALSDAIMGVSAVLHLGAF   87 (347)
T ss_dssp             ----CEEEETTTSHHHHHHHHHHHHTTCCEEEEESSCCS-------SCCSEEESCTTCHHHHHHHHTTCSEEEECCCC
T ss_pred             cCCCEEEEECCCChHHHHHHHHHHhCCCEEEEEeCCCCC-------CCccEEecCcCCHHHHHHHHhCCCEEEECCcc
Confidence            46778999998 999999999999999999999988754       23332 33566777777777799999999875

>2r6j_A Eugenol synthase 1; phenylpropene, PIP reductase, short-chain dehydrogenase/reductase, plant protein; HET: NDP; 1.50A {Ocimum basilicum} PDB: 2qys_A 2qx7_A* 2qzz_A* 2r2g_A* 3c3x_A* 2qw8_A*

Probab=96.34  E-value=0.01  Score=53.11  Aligned_cols=91  Identities=18%  Similarity=0.220  Sum_probs=63.0

Q ss_pred             CEEEEEcC-ChHHHHHHHHHHHcCCeEEEEeCCch-hHHHH--HHHcCCCE-EecCCCHHHHHHhcCCccEEEEcCCCcc
Q 018067          185 MHVGVVGL-GGLGHVAVKFAKAMGVKVTVISTSPS-KKSEA--IERLGADS-FLVSRDQDEMQAAMGTMDGIIDTVSAVH  259 (361)
Q Consensus       185 ~~vlV~Ga-g~vG~~a~~la~~~g~~vi~~~~~~~-~~~~~--~~~~g~~~-vv~~~~~~~~~~~~~g~d~vid~~g~~~  259 (361)
                      .+|||+|+ |.+|..++..+...|.+|++++++.. +...+  .+..++.. ..|..+++.+.++..++|+||.+++...
T Consensus        12 ~~ilVtGatG~iG~~l~~~L~~~g~~V~~l~R~~~~~~~~~~~l~~~~v~~v~~Dl~d~~~l~~a~~~~d~vi~~a~~~~   91 (318)
T 2r6j_A           12 SKILIFGGTGYIGNHMVKGSLKLGHPTYVFTRPNSSKTTLLDEFQSLGAIIVKGELDEHEKLVELMKKVDVVISALAFPQ   91 (318)
T ss_dssp             CCEEEETTTSTTHHHHHHHHHHTTCCEEEEECTTCSCHHHHHHHHHTTCEEEECCTTCHHHHHHHHTTCSEEEECCCGGG
T ss_pred             CeEEEECCCchHHHHHHHHHHHCCCcEEEEECCCCchhhHHHHhhcCCCEEEEecCCCHHHHHHHHcCCCEEEECCchhh
Confidence            46999998 99999999999999999999998864 22221  12345542 3466777777777789999999998531


Q ss_pred             --cHHHHHhccccC---CEEE
Q 018067          260 --PLMPLIGLLKSQ---GKLV  275 (361)
Q Consensus       260 --~~~~~~~~l~~~---G~~v  275 (361)
                        .....++.++..   ++++
T Consensus        92 ~~~~~~l~~aa~~~g~v~~~v  112 (318)
T 2r6j_A           92 ILDQFKILEAIKVAGNIKRFL  112 (318)
T ss_dssp             STTHHHHHHHHHHHCCCCEEE
T ss_pred             hHHHHHHHHHHHhcCCCCEEE
Confidence              133444444432   4666

>2pzm_A Putative nucleotide sugar epimerase/ dehydratase; rossman fold, protein-NAD complex, protein-nucleotide comple binding protein; HET: NAD UDP; 2.00A {Bordetella bronchiseptica} PDB: 2pzl_A* 2pzk_A*

Probab=96.33  E-value=0.0043  Score=56.02  Aligned_cols=76  Identities=18%  Similarity=0.227  Sum_probs=53.5

Q ss_pred             CCCEEEEEcC-ChHHHHHHHHHHHcCCeEEEEeCCchhHHHHHHHc-CCC-EEecCCCHHHHHHhcC--CccEEEEcCCC
Q 018067          183 PGMHVGVVGL-GGLGHVAVKFAKAMGVKVTVISTSPSKKSEAIERL-GAD-SFLVSRDQDEMQAAMG--TMDGIIDTVSA  257 (361)
Q Consensus       183 ~g~~vlV~Ga-g~vG~~a~~la~~~g~~vi~~~~~~~~~~~~~~~~-g~~-~vv~~~~~~~~~~~~~--g~d~vid~~g~  257 (361)
                      .+.+|||.|+ |.+|..+++.+...|.+|+++++.........+.+ ++. ...|..+.+.+.++..  ++|+||+++|.
T Consensus        19 ~~~~vlVTGasG~iG~~l~~~L~~~g~~V~~~~r~~~~~~~~~~~l~~v~~~~~Dl~d~~~~~~~~~~~~~D~vih~A~~   98 (330)
T 2pzm_A           19 SHMRILITGGAGCLGSNLIEHWLPQGHEILVIDNFATGKREVLPPVAGLSVIEGSVTDAGLLERAFDSFKPTHVVHSAAA   98 (330)
T ss_dssp             TCCEEEEETTTSHHHHHHHHHHGGGTCEEEEEECCSSSCGGGSCSCTTEEEEECCTTCHHHHHHHHHHHCCSEEEECCCC
T ss_pred             CCCEEEEECCCCHHHHHHHHHHHHCCCEEEEEECCCccchhhhhccCCceEEEeeCCCHHHHHHHHhhcCCCEEEECCcc
Confidence            5678999998 99999999999889999999998654322111112 121 1235556666666655  89999999985


Q ss_pred             c
Q 018067          258 V  258 (361)
Q Consensus       258 ~  258 (361)
                      .
T Consensus        99 ~   99 (330)
T 2pzm_A           99 Y   99 (330)
T ss_dssp             C
T ss_pred             C
Confidence            3

>4e5n_A Thermostable phosphite dehydrogenase; D-2-hydroxyacid dehydrogenase, oxidoreductase; HET: NAD; 1.70A {Pseudomonas stutzeri} PDB: 4e5k_A* 4ebf_A* 4e5p_A* 4e5m_A*

Probab=96.32  E-value=0.0066  Score=54.97  Aligned_cols=89  Identities=18%  Similarity=0.262  Sum_probs=64.9

Q ss_pred             CCCEEEEEcCChHHHHHHHHHHHcCCeEEEEeCCchhHHHHHHHcCCCEEecCCCHHHHHHhcCCccEEEEcCCCc----
Q 018067          183 PGMHVGVVGLGGLGHVAVKFAKAMGVKVTVISTSPSKKSEAIERLGADSFLVSRDQDEMQAAMGTMDGIIDTVSAV----  258 (361)
Q Consensus       183 ~g~~vlV~Gag~vG~~a~~la~~~g~~vi~~~~~~~~~~~~~~~~g~~~vv~~~~~~~~~~~~~g~d~vid~~g~~----  258 (361)
                      .|.+|.|+|.|.+|..+++.++.+|++|++.+++....... +.+|+..    .+   +.++....|+|+-++...    
T Consensus       144 ~g~tvGIIG~G~IG~~vA~~l~~~G~~V~~~d~~~~~~~~~-~~~g~~~----~~---l~ell~~aDvV~l~~P~t~~t~  215 (330)
T 4e5n_A          144 DNATVGFLGMGAIGLAMADRLQGWGATLQYHEAKALDTQTE-QRLGLRQ----VA---CSELFASSDFILLALPLNADTL  215 (330)
T ss_dssp             TTCEEEEECCSHHHHHHHHHTTTSCCEEEEECSSCCCHHHH-HHHTEEE----CC---HHHHHHHCSEEEECCCCSTTTT
T ss_pred             CCCEEEEEeeCHHHHHHHHHHHHCCCEEEEECCCCCcHhHH-HhcCcee----CC---HHHHHhhCCEEEEcCCCCHHHH
Confidence            58899999999999999999999999999998876433333 4566532    12   223334589999887632    


Q ss_pred             ccH-HHHHhccccCCEEEEecC
Q 018067          259 HPL-MPLIGLLKSQGKLVLVGA  279 (361)
Q Consensus       259 ~~~-~~~~~~l~~~G~~v~~g~  279 (361)
                      ..+ ...+..++++..+|.++.
T Consensus       216 ~li~~~~l~~mk~gailIN~ar  237 (330)
T 4e5n_A          216 HLVNAELLALVRPGALLVNPCR  237 (330)
T ss_dssp             TCBCHHHHTTSCTTEEEEECSC
T ss_pred             HHhCHHHHhhCCCCcEEEECCC
Confidence            112 467788899999999875

>3u62_A Shikimate dehydrogenase; shikimate pathway, oxidoreductase; 1.45A {Thermotoga maritima}

Probab=96.30  E-value=0.002  Score=56.09  Aligned_cols=91  Identities=19%  Similarity=0.125  Sum_probs=60.7

Q ss_pred             CCCEEEEEcCChHHHHHHHHHHHcCC-eEEEEeCCchhHHHHHHHcCCCEEecCCCHHHHHHhcCCccEEEEcCCCcc--
Q 018067          183 PGMHVGVVGLGGLGHVAVKFAKAMGV-KVTVISTSPSKKSEAIERLGADSFLVSRDQDEMQAAMGTMDGIIDTVSAVH--  259 (361)
Q Consensus       183 ~g~~vlV~Gag~vG~~a~~la~~~g~-~vi~~~~~~~~~~~~~~~~g~~~vv~~~~~~~~~~~~~g~d~vid~~g~~~--  259 (361)
                      .+ +++|+|+|++|.+++..+...|+ +|+++.++.++.+.++++++.   ...   +...+...++|+||+++....  
T Consensus       108 ~~-~vliiGaGg~a~ai~~~L~~~G~~~I~v~nR~~~ka~~la~~~~~---~~~---~~~~~~~~~aDiVInatp~gm~p  180 (253)
T 3u62_A          108 KE-PVVVVGAGGAARAVIYALLQMGVKDIWVVNRTIERAKALDFPVKI---FSL---DQLDEVVKKAKSLFNTTSVGMKG  180 (253)
T ss_dssp             CS-SEEEECCSHHHHHHHHHHHHTTCCCEEEEESCHHHHHTCCSSCEE---EEG---GGHHHHHHTCSEEEECSSTTTTS
T ss_pred             CC-eEEEECcHHHHHHHHHHHHHcCCCEEEEEeCCHHHHHHHHHHccc---CCH---HHHHhhhcCCCEEEECCCCCCCC
Confidence            46 89999999999999999999998 999999998776555444332   122   222333457999999885321  


Q ss_pred             -cHHHHHhccccCCEEEEecCC
Q 018067          260 -PLMPLIGLLKSQGKLVLVGAP  280 (361)
Q Consensus       260 -~~~~~~~~l~~~G~~v~~g~~  280 (361)
                       ........++++..++++-..
T Consensus       181 ~~~~i~~~~l~~~~~V~Divy~  202 (253)
T 3u62_A          181 EELPVSDDSLKNLSLVYDVIYF  202 (253)
T ss_dssp             CCCSCCHHHHTTCSEEEECSSS
T ss_pred             CCCCCCHHHhCcCCEEEEeeCC
Confidence             000113446677777776543

>3db2_A Putative NADPH-dependent oxidoreductase; two domain protein, rossman fold, putative dehydrogenase, ST genomics; 1.70A {Desulfitobacterium hafniense dcb-2}

Probab=96.30  E-value=0.046  Score=49.85  Aligned_cols=132  Identities=15%  Similarity=0.151  Sum_probs=81.2

Q ss_pred             CEEEEEcCChHHHHHHHHHHHc-CCeEEEE-eCCchhHHHHHHHcCCCEEecCCCHHHHHHhcCCccEEEEcCCCcccHH
Q 018067          185 MHVGVVGLGGLGHVAVKFAKAM-GVKVTVI-STSPSKKSEAIERLGADSFLVSRDQDEMQAAMGTMDGIIDTVSAVHPLM  262 (361)
Q Consensus       185 ~~vlV~Gag~vG~~a~~la~~~-g~~vi~~-~~~~~~~~~~~~~~g~~~vv~~~~~~~~~~~~~g~d~vid~~g~~~~~~  262 (361)
                      -+|.|+|+|.+|...+..++.. +++++.+ +++.++...+++++|+..   +.+.+.+.. ...+|+|+.++....-..
T Consensus         6 ~~vgiiG~G~~g~~~~~~l~~~~~~~lvav~d~~~~~~~~~~~~~g~~~---~~~~~~~l~-~~~~D~V~i~tp~~~h~~   81 (354)
T 3db2_A            6 VGVAAIGLGRWAYVMADAYTKSEKLKLVTCYSRTEDKREKFGKRYNCAG---DATMEALLA-REDVEMVIITVPNDKHAE   81 (354)
T ss_dssp             EEEEEECCSHHHHHHHHHHTTCSSEEEEEEECSSHHHHHHHHHHHTCCC---CSSHHHHHH-CSSCCEEEECSCTTSHHH
T ss_pred             ceEEEEccCHHHHHHHHHHHhCCCcEEEEEECCCHHHHHHHHHHcCCCC---cCCHHHHhc-CCCCCEEEEeCChHHHHH
Confidence            3689999999999888877776 7787655 556666677777888653   333322211 247999999998865466


Q ss_pred             HHHhccccCCEEEEecCCCCCcccChHH---H----HhCCc-EEEecccCCHHHHHHHHHHHHcCCCcee
Q 018067          263 PLIGLLKSQGKLVLVGAPEKPLELPAFS---L----LMGRK-IVGGSMIGGMKETQEMIDFAAKHNIRAD  324 (361)
Q Consensus       263 ~~~~~l~~~G~~v~~g~~~~~~~~~~~~---~----~~~~~-~i~g~~~~~~~~~~~~~~ll~~~~~~~~  324 (361)
                      .+..+++.| +-+++..   ++..+..+   +    -.+++ -..+........++.+.+++++|.+-..
T Consensus        82 ~~~~al~~g-k~vl~EK---P~~~~~~~~~~l~~~a~~~~~~~~v~~~~R~~p~~~~~k~~i~~g~iG~i  147 (354)
T 3db2_A           82 VIEQCARSG-KHIYVEK---PISVSLDHAQRIDQVIKETGVKFLCGHSSRRLGALRKMKEMIDTKEIGEV  147 (354)
T ss_dssp             HHHHHHHTT-CEEEEES---SSCSSHHHHHHHHHHHHHHCCCEEEECGGGGSHHHHHHHHHHHTTTTCCE
T ss_pred             HHHHHHHcC-CEEEEcc---CCCCCHHHHHHHHHHHHHcCCeEEEeechhcCHHHHHHHHHHhcCCCCCe
Confidence            677777665 4455543   22222211   1    11222 3344444444567777788888777543

>2gcg_A Glyoxylate reductase/hydroxypyruvate reductase; NAD(P) rossmann fold, formate/glycerate dehydrogenase substr binding domain, oxidoreductase; HET: NDP; 2.20A {Homo sapiens} PDB: 2wwr_A 2h1s_A 2q50_A

Probab=96.29  E-value=0.021  Score=51.72  Aligned_cols=90  Identities=18%  Similarity=0.251  Sum_probs=64.2

Q ss_pred             CCCCEEEEEcCChHHHHHHHHHHHcCCeEEEEeCCchhHHHHHHHcCCCEEecCCCHHHHHHhcCCccEEEEcCCCc---
Q 018067          182 KPGMHVGVVGLGGLGHVAVKFAKAMGVKVTVISTSPSKKSEAIERLGADSFLVSRDQDEMQAAMGTMDGIIDTVSAV---  258 (361)
Q Consensus       182 ~~g~~vlV~Gag~vG~~a~~la~~~g~~vi~~~~~~~~~~~~~~~~g~~~vv~~~~~~~~~~~~~g~d~vid~~g~~---  258 (361)
                      -.|.+|.|+|.|.+|...++.++..|.+|++.+++.++.... .++|....    +.   .++....|+|+.++...   
T Consensus       153 l~g~~vgIIG~G~iG~~iA~~l~~~G~~V~~~d~~~~~~~~~-~~~g~~~~----~l---~e~l~~aDvVi~~vp~~~~t  224 (330)
T 2gcg_A          153 LTQSTVGIIGLGRIGQAIARRLKPFGVQRFLYTGRQPRPEEA-AEFQAEFV----ST---PELAAQSDFIVVACSLTPAT  224 (330)
T ss_dssp             CTTCEEEEECCSHHHHHHHHHHGGGTCCEEEEESSSCCHHHH-HTTTCEEC----CH---HHHHHHCSEEEECCCCCTTT
T ss_pred             CCCCEEEEECcCHHHHHHHHHHHHCCCEEEEECCCCcchhHH-HhcCceeC----CH---HHHHhhCCEEEEeCCCChHH
Confidence            357899999999999999999999999999999876554443 45554321    21   22233589999988653   


Q ss_pred             -ccH-HHHHhccccCCEEEEecC
Q 018067          259 -HPL-MPLIGLLKSQGKLVLVGA  279 (361)
Q Consensus       259 -~~~-~~~~~~l~~~G~~v~~g~  279 (361)
                       ..+ ...+..++++..++.++.
T Consensus       225 ~~~i~~~~~~~mk~gailIn~sr  247 (330)
T 2gcg_A          225 EGLCNKDFFQKMKETAVFINISR  247 (330)
T ss_dssp             TTCBSHHHHHHSCTTCEEEECSC
T ss_pred             HHhhCHHHHhcCCCCcEEEECCC
Confidence             112 345677888888888764

>4e3z_A Putative oxidoreductase protein; PSI-biology, structural genomics, protein structure initiati nysgrc,oxidoreductase; 2.00A {Rhizobium etli}

Probab=96.28  E-value=0.016  Score=50.73  Aligned_cols=76  Identities=18%  Similarity=0.292  Sum_probs=52.2

Q ss_pred             CCCCEEEEEcC-ChHHHHHHHHHHHcCCeEEEE-eCCchhHHHHHHH---cCCCE---EecCCCHHHHHHh-------cC
Q 018067          182 KPGMHVGVVGL-GGLGHVAVKFAKAMGVKVTVI-STSPSKKSEAIER---LGADS---FLVSRDQDEMQAA-------MG  246 (361)
Q Consensus       182 ~~g~~vlV~Ga-g~vG~~a~~la~~~g~~vi~~-~~~~~~~~~~~~~---~g~~~---vv~~~~~~~~~~~-------~~  246 (361)
                      .+++++||.|+ |++|.++++.+...|++|+++ .++.++...+.+.   .+...   ..|..+.+.+..+       .+
T Consensus        24 ~~~k~vlITGas~gIG~a~a~~l~~~G~~V~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~Dl~~~~~v~~~~~~~~~~~g  103 (272)
T 4e3z_A           24 SDTPVVLVTGGSRGIGAAVCRLAARQGWRVGVNYAANREAADAVVAAITESGGEAVAIPGDVGNAADIAAMFSAVDRQFG  103 (272)
T ss_dssp             CCSCEEEETTTTSHHHHHHHHHHHHTTCEEEEEESSCHHHHHHHHHHHHHTTCEEEEEECCTTCHHHHHHHHHHHHHHHS
T ss_pred             cCCCEEEEECCCchHHHHHHHHHHHCCCEEEEEcCCChhHHHHHHHHHHhcCCcEEEEEcCCCCHHHHHHHHHHHHHhCC
Confidence            45788999997 999999999999999999877 5555554444332   34322   2245555433332       24


Q ss_pred             CccEEEEcCCC
Q 018067          247 TMDGIIDTVSA  257 (361)
Q Consensus       247 g~d~vid~~g~  257 (361)
                      ++|++|+++|.
T Consensus       104 ~id~li~nAg~  114 (272)
T 4e3z_A          104 RLDGLVNNAGI  114 (272)
T ss_dssp             CCCEEEECCCC
T ss_pred             CCCEEEECCCC
Confidence            79999999984

>1nvt_A Shikimate 5'-dehydrogenase; structural genomics, PSI, protein structure initiative; HET: NAP; 2.35A {Methanocaldococcus jannaschii} SCOP: c.2.1.7 c.58.1.5

Probab=96.28  E-value=0.007  Score=53.70  Aligned_cols=94  Identities=9%  Similarity=0.025  Sum_probs=64.2

Q ss_pred             CCCCEEEEEcCChHHHHHHHHHHHcCCeEEEEeCCchhHHHHHHHcCCC---E---EecCCCHHHHHHhcCCccEEEEcC
Q 018067          182 KPGMHVGVVGLGGLGHVAVKFAKAMGVKVTVISTSPSKKSEAIERLGAD---S---FLVSRDQDEMQAAMGTMDGIIDTV  255 (361)
Q Consensus       182 ~~g~~vlV~Gag~vG~~a~~la~~~g~~vi~~~~~~~~~~~~~~~~g~~---~---vv~~~~~~~~~~~~~g~d~vid~~  255 (361)
                      -.+++++|+|+|++|.+++..+...| +|+++.++.++.+.++++++..   .   .++..+   +.+..+++|++|+++
T Consensus       126 l~~k~vlV~GaGgiG~aia~~L~~~G-~V~v~~r~~~~~~~l~~~~~~~~~~~~~~~~d~~~---~~~~~~~~DilVn~a  201 (287)
T 1nvt_A          126 VKDKNIVIYGAGGAARAVAFELAKDN-NIIIANRTVEKAEALAKEIAEKLNKKFGEEVKFSG---LDVDLDGVDIIINAT  201 (287)
T ss_dssp             CCSCEEEEECCSHHHHHHHHHHTSSS-EEEEECSSHHHHHHHHHHHHHHHTCCHHHHEEEEC---TTCCCTTCCEEEECS
T ss_pred             cCCCEEEEECchHHHHHHHHHHHHCC-CEEEEECCHHHHHHHHHHHhhhcccccceeEEEee---HHHhhCCCCEEEECC
Confidence            36789999999999999999999999 9999999887777776655321   0   011111   112235799999999


Q ss_pred             CCcccHH-----H-HHhccccCCEEEEecC
Q 018067          256 SAVHPLM-----P-LIGLLKSQGKLVLVGA  279 (361)
Q Consensus       256 g~~~~~~-----~-~~~~l~~~G~~v~~g~  279 (361)
                      |......     . ....++++..++.+..
T Consensus       202 g~~~~~~~~~~~~~~~~~l~~~~~v~Dv~y  231 (287)
T 1nvt_A          202 PIGMYPNIDVEPIVKAEKLREDMVVMDLIY  231 (287)
T ss_dssp             CTTCTTCCSSCCSSCSTTCCSSSEEEECCC
T ss_pred             CCCCCCCCCCCCCCCHHHcCCCCEEEEeee
Confidence            8654110     1 2356677777888875

>3gk3_A Acetoacetyl-COA reductase; acetoacetyl-CO reductase, oxidoreductase, structural genomics; 2.10A {Burkholderia pseudomallei 1710B}

Probab=96.28  E-value=0.012  Score=51.58  Aligned_cols=76  Identities=21%  Similarity=0.251  Sum_probs=51.1

Q ss_pred             CCCCEEEEEcC-ChHHHHHHHHHHHcCCeEEEEe-CCchhHHHHHHH---cCCC---EEecCCCHHHHHHh-------cC
Q 018067          182 KPGMHVGVVGL-GGLGHVAVKFAKAMGVKVTVIS-TSPSKKSEAIER---LGAD---SFLVSRDQDEMQAA-------MG  246 (361)
Q Consensus       182 ~~g~~vlV~Ga-g~vG~~a~~la~~~g~~vi~~~-~~~~~~~~~~~~---~g~~---~vv~~~~~~~~~~~-------~~  246 (361)
                      ..++++||.|+ |++|..+++.+...|++|++++ +..+......+.   .+..   ...|..+.+.+..+       .+
T Consensus        23 ~~~k~vlITGas~gIG~~~a~~l~~~G~~v~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~Dl~~~~~v~~~~~~~~~~~g  102 (269)
T 3gk3_A           23 QAKRVAFVTGGMGGLGAAISRRLHDAGMAVAVSHSERNDHVSTWLMHERDAGRDFKAYAVDVADFESCERCAEKVLADFG  102 (269)
T ss_dssp             -CCCEEEETTTTSHHHHHHHHHHHTTTCEEEEEECSCHHHHHHHHHHHHTTTCCCEEEECCTTCHHHHHHHHHHHHHHHS
T ss_pred             hcCCEEEEECCCchHHHHHHHHHHHCCCEEEEEcCCchHHHHHHHHHHHhcCCceEEEEecCCCHHHHHHHHHHHHHHcC
Confidence            35678999987 9999999999999999999998 444433333222   2322   12355565443332       24


Q ss_pred             CccEEEEcCCC
Q 018067          247 TMDGIIDTVSA  257 (361)
Q Consensus       247 g~d~vid~~g~  257 (361)
                      ++|++|+++|.
T Consensus       103 ~id~li~nAg~  113 (269)
T 3gk3_A          103 KVDVLINNAGI  113 (269)
T ss_dssp             CCSEEEECCCC
T ss_pred             CCCEEEECCCc
Confidence            79999999984

>3doj_A AT3G25530, dehydrogenase-like protein; gamma-hydroxybutyrate dehydrogenase, 4-hydroxybutyrate dehydrogenase; 2.10A {Arabidopsis thaliana}

Probab=96.27  E-value=0.018  Score=51.63  Aligned_cols=89  Identities=21%  Similarity=0.231  Sum_probs=63.1

Q ss_pred             CCEEEEEcCChHHHHHHHHHHHcCCeEEEEeCCchhHHHHHHHcCCCEEecCCCHHHHHHhcCCccEEEEcCCCcccHHH
Q 018067          184 GMHVGVVGLGGLGHVAVKFAKAMGVKVTVISTSPSKKSEAIERLGADSFLVSRDQDEMQAAMGTMDGIIDTVSAVHPLMP  263 (361)
Q Consensus       184 g~~vlV~Gag~vG~~a~~la~~~g~~vi~~~~~~~~~~~~~~~~g~~~vv~~~~~~~~~~~~~g~d~vid~~g~~~~~~~  263 (361)
                      -.+|.|+|.|.+|...+..+...|.+|++.++++++.+.+. +.|+..   ..+.   .++....|+||-++..+..+..
T Consensus        21 m~~I~iIG~G~mG~~~A~~l~~~G~~V~~~dr~~~~~~~l~-~~g~~~---~~~~---~~~~~~aDvvi~~vp~~~~~~~   93 (310)
T 3doj_A           21 MMEVGFLGLGIMGKAMSMNLLKNGFKVTVWNRTLSKCDELV-EHGASV---CESP---AEVIKKCKYTIAMLSDPCAALS   93 (310)
T ss_dssp             SCEEEEECCSHHHHHHHHHHHHTTCEEEEECSSGGGGHHHH-HTTCEE---CSSH---HHHHHHCSEEEECCSSHHHHHH
T ss_pred             CCEEEEECccHHHHHHHHHHHHCCCeEEEEeCCHHHHHHHH-HCCCeE---cCCH---HHHHHhCCEEEEEcCCHHHHHH
Confidence            35799999999999999999999999999999998877774 566532   1221   1222347999999987543444


Q ss_pred             HH-------hccccCCEEEEecC
Q 018067          264 LI-------GLLKSQGKLVLVGA  279 (361)
Q Consensus       264 ~~-------~~l~~~G~~v~~g~  279 (361)
                      .+       ..++++..++.++.
T Consensus        94 v~~~~~~l~~~l~~g~~vv~~st  116 (310)
T 3doj_A           94 VVFDKGGVLEQICEGKGYIDMST  116 (310)
T ss_dssp             HHHSTTCGGGGCCTTCEEEECSC
T ss_pred             HHhCchhhhhccCCCCEEEECCC
Confidence            44       34566667777664

>1oaa_A Sepiapterin reductase; tetrahydrobiopterin, oxidoreductase; HET: NAP; 1.25A {Mus musculus} SCOP: c.2.1.2 PDB: 1nas_A* 1sep_A* 1z6z_A*

Probab=96.27  E-value=0.01  Score=51.57  Aligned_cols=75  Identities=15%  Similarity=0.079  Sum_probs=53.1

Q ss_pred             CCCEEEEEcC-ChHHHHHHHHHHH---cCCeEEEEeCCchhHHHHHHHc-----CCCE---EecCCCHHHHHH----hc-
Q 018067          183 PGMHVGVVGL-GGLGHVAVKFAKA---MGVKVTVISTSPSKKSEAIERL-----GADS---FLVSRDQDEMQA----AM-  245 (361)
Q Consensus       183 ~g~~vlV~Ga-g~vG~~a~~la~~---~g~~vi~~~~~~~~~~~~~~~~-----g~~~---vv~~~~~~~~~~----~~-  245 (361)
                      .++++||.|+ |++|..++..+..   .|++|++++++.++...+.+++     +...   ..|-.+++.+..    +. 
T Consensus         5 ~~k~~lVTGas~gIG~~ia~~l~~~~~~G~~V~~~~r~~~~~~~~~~~l~~~~~~~~~~~~~~Dv~~~~~v~~~~~~~~~   84 (259)
T 1oaa_A            5 GCAVCVLTGASRGFGRALAPQLARLLSPGSVMLVSARSESMLRQLKEELGAQQPDLKVVLAAADLGTEAGVQRLLSAVRE   84 (259)
T ss_dssp             BSEEEEESSCSSHHHHHHHHHHHTTBCTTCEEEEEESCHHHHHHHHHHHHHHCTTSEEEEEECCTTSHHHHHHHHHHHHH
T ss_pred             CCcEEEEeCCCChHHHHHHHHHHHhhcCCCeEEEEeCCHHHHHHHHHHHHhhCCCCeEEEEecCCCCHHHHHHHHHHHHh
Confidence            4678999987 9999999998887   8999999999987766665544     3321   235555543332    21 


Q ss_pred             ----CCcc--EEEEcCCC
Q 018067          246 ----GTMD--GIIDTVSA  257 (361)
Q Consensus       246 ----~g~d--~vid~~g~  257 (361)
                          +++|  ++|+++|.
T Consensus        85 ~~~~g~~d~~~lvnnAg~  102 (259)
T 1oaa_A           85 LPRPEGLQRLLLINNAAT  102 (259)
T ss_dssp             SCCCTTCCEEEEEECCCC
T ss_pred             ccccccCCccEEEECCcc
Confidence                2578  99999884

>2w2k_A D-mandelate dehydrogenase; 2-hydroxyacid dehydrogenase, oxidoreductase; 1.85A {Rhodotorula graminis} PDB: 2w2l_A* 2w2l_D* 2w2k_B

Probab=96.26  E-value=0.011  Score=53.88  Aligned_cols=91  Identities=19%  Similarity=0.322  Sum_probs=64.6

Q ss_pred             CCCCEEEEEcCChHHHHHHHHHH-HcCCeEEEEeCCchhHHHHHHHcCCCEEecCCCHHHHHHhcCCccEEEEcCCCcc-
Q 018067          182 KPGMHVGVVGLGGLGHVAVKFAK-AMGVKVTVISTSPSKKSEAIERLGADSFLVSRDQDEMQAAMGTMDGIIDTVSAVH-  259 (361)
Q Consensus       182 ~~g~~vlV~Gag~vG~~a~~la~-~~g~~vi~~~~~~~~~~~~~~~~g~~~vv~~~~~~~~~~~~~g~d~vid~~g~~~-  259 (361)
                      -.|.+|.|+|.|.+|...++.++ .+|.+|++.+++.++.... .++|+..+   .+.   .++....|+|+.++.... 
T Consensus       161 l~g~~vgIIG~G~IG~~vA~~l~~~~G~~V~~~d~~~~~~~~~-~~~g~~~~---~~l---~ell~~aDvVil~vp~~~~  233 (348)
T 2w2k_A          161 PRGHVLGAVGLGAIQKEIARKAVHGLGMKLVYYDVAPADAETE-KALGAERV---DSL---EELARRSDCVSVSVPYMKL  233 (348)
T ss_dssp             STTCEEEEECCSHHHHHHHHHHHHTTCCEEEEECSSCCCHHHH-HHHTCEEC---SSH---HHHHHHCSEEEECCCCSGG
T ss_pred             CCCCEEEEEEECHHHHHHHHHHHHhcCCEEEEECCCCcchhhH-hhcCcEEe---CCH---HHHhccCCEEEEeCCCChH
Confidence            46889999999999999999999 9999999998876654433 45565421   121   222335899998876532 


Q ss_pred             ---cH-HHHHhccccCCEEEEecC
Q 018067          260 ---PL-MPLIGLLKSQGKLVLVGA  279 (361)
Q Consensus       260 ---~~-~~~~~~l~~~G~~v~~g~  279 (361)
                         .+ ...+..++++..++.++.
T Consensus       234 t~~li~~~~l~~mk~gailin~sr  257 (348)
T 2w2k_A          234 THHLIDEAFFAAMKPGSRIVNTAR  257 (348)
T ss_dssp             GTTCBCHHHHHHSCTTEEEEECSC
T ss_pred             HHHHhhHHHHhcCCCCCEEEECCC
Confidence               12 345677888888888765

>3slg_A PBGP3 protein; structural genomics, seattle structural genomics center for infectious disease, ssgcid, melioidosis, glanders; 2.10A {Burkholderia pseudomallei}

Probab=96.26  E-value=0.0045  Score=56.82  Aligned_cols=74  Identities=14%  Similarity=0.093  Sum_probs=54.7

Q ss_pred             CCEEEEEcC-ChHHHHHHHHHHHc-CCeEEEEeCCchhHHHHHHHcCCCE-EecCC-CHHHHHHhcCCccEEEEcCCC
Q 018067          184 GMHVGVVGL-GGLGHVAVKFAKAM-GVKVTVISTSPSKKSEAIERLGADS-FLVSR-DQDEMQAAMGTMDGIIDTVSA  257 (361)
Q Consensus       184 g~~vlV~Ga-g~vG~~a~~la~~~-g~~vi~~~~~~~~~~~~~~~~g~~~-vv~~~-~~~~~~~~~~g~d~vid~~g~  257 (361)
                      +.+|||+|+ |.+|...++.+... |.+|++++++.++...+...-+... ..|.. +.+.+.++..++|+||++++.
T Consensus        24 ~~~vlVtGatG~iG~~l~~~L~~~~g~~V~~~~r~~~~~~~~~~~~~v~~~~~Dl~~d~~~~~~~~~~~d~Vih~A~~  101 (372)
T 3slg_A           24 AKKVLILGVNGFIGHHLSKRILETTDWEVFGMDMQTDRLGDLVKHERMHFFEGDITINKEWVEYHVKKCDVILPLVAI  101 (372)
T ss_dssp             CCEEEEESCSSHHHHHHHHHHHHHSSCEEEEEESCCTTTGGGGGSTTEEEEECCTTTCHHHHHHHHHHCSEEEECBCC
T ss_pred             CCEEEEECCCChHHHHHHHHHHhCCCCEEEEEeCChhhhhhhccCCCeEEEeCccCCCHHHHHHHhccCCEEEEcCcc
Confidence            578999997 99999999988887 8999999998766544422223332 23555 666666666689999998885

>1sny_A Sniffer CG10964-PA; alpha and beta protein, rossmann fold, dinucleotide binding oxidoreductase; HET: NAP; 1.75A {Drosophila melanogaster} SCOP: c.2.1.2

Probab=96.25  E-value=0.0082  Score=52.31  Aligned_cols=76  Identities=12%  Similarity=0.101  Sum_probs=51.3

Q ss_pred             CCCCEEEEEcC-ChHHHHHHHHHHHcC---CeEEEEeCCchhHHHHHH--HcCCCE---EecCCCHHHHHHhc-------
Q 018067          182 KPGMHVGVVGL-GGLGHVAVKFAKAMG---VKVTVISTSPSKKSEAIE--RLGADS---FLVSRDQDEMQAAM-------  245 (361)
Q Consensus       182 ~~g~~vlV~Ga-g~vG~~a~~la~~~g---~~vi~~~~~~~~~~~~~~--~~g~~~---vv~~~~~~~~~~~~-------  245 (361)
                      ..++++||.|+ |.+|..+++.+...|   ++|++++++.++...+.+  ..+...   ..|..+.+.+..+.       
T Consensus        19 ~~~k~vlITGasggIG~~la~~L~~~G~~~~~V~~~~r~~~~~~~~~~l~~~~~~~~~~~~Dl~~~~~v~~~~~~~~~~~   98 (267)
T 1sny_A           19 SHMNSILITGCNRGLGLGLVKALLNLPQPPQHLFTTCRNREQAKELEDLAKNHSNIHILEIDLRNFDAYDKLVADIEGVT   98 (267)
T ss_dssp             -CCSEEEESCCSSHHHHHHHHHHHTSSSCCSEEEEEESCTTSCHHHHHHHHHCTTEEEEECCTTCGGGHHHHHHHHHHHH
T ss_pred             CCCCEEEEECCCCcHHHHHHHHHHhcCCCCcEEEEEecChhhhHHHHHhhccCCceEEEEecCCChHHHHHHHHHHHHhc
Confidence            45678999987 999999999999999   999999998765433311  113221   23444544333322       


Q ss_pred             C--CccEEEEcCCC
Q 018067          246 G--TMDGIIDTVSA  257 (361)
Q Consensus       246 ~--g~d~vid~~g~  257 (361)
                      +  ++|++|+++|.
T Consensus        99 g~~~id~li~~Ag~  112 (267)
T 1sny_A           99 KDQGLNVLFNNAGI  112 (267)
T ss_dssp             GGGCCSEEEECCCC
T ss_pred             CCCCccEEEECCCc
Confidence            2  69999999984

>2ahr_A Putative pyrroline carboxylate reductase; pyrroline reductase, proline biosynthesis, NAD(P protein, rossmann fold, doain swapping; HET: NAP; 2.15A {Streptococcus pyogenes} SCOP: a.100.1.10 c.2.1.6 PDB: 2amf_A

Probab=96.24  E-value=0.013  Score=50.85  Aligned_cols=85  Identities=14%  Similarity=0.250  Sum_probs=62.8

Q ss_pred             EEEEEcCChHHHHHHHHHHHcCCeEEEEeCCchhHHHHHHHcCCCEEecCCCHHHHHHhcCCccEEEEcCCCcccHHHHH
Q 018067          186 HVGVVGLGGLGHVAVKFAKAMGVKVTVISTSPSKKSEAIERLGADSFLVSRDQDEMQAAMGTMDGIIDTVSAVHPLMPLI  265 (361)
Q Consensus       186 ~vlV~Gag~vG~~a~~la~~~g~~vi~~~~~~~~~~~~~~~~g~~~vv~~~~~~~~~~~~~g~d~vid~~g~~~~~~~~~  265 (361)
                      +|.|+|+|.+|...+..+...|.+|.+.++++++.+.+.+++|...   ..+.+   +....+|+||.++.... ....+
T Consensus         5 ~i~iiG~G~mG~~~a~~l~~~g~~v~~~~~~~~~~~~~~~~~g~~~---~~~~~---~~~~~~D~Vi~~v~~~~-~~~v~   77 (259)
T 2ahr_A            5 KIGIIGVGKMASAIIKGLKQTPHELIISGSSLERSKEIAEQLALPY---AMSHQ---DLIDQVDLVILGIKPQL-FETVL   77 (259)
T ss_dssp             EEEEECCSHHHHHHHHHHTTSSCEEEEECSSHHHHHHHHHHHTCCB---CSSHH---HHHHTCSEEEECSCGGG-HHHHH
T ss_pred             EEEEECCCHHHHHHHHHHHhCCCeEEEECCCHHHHHHHHHHcCCEe---eCCHH---HHHhcCCEEEEEeCcHh-HHHHH
Confidence            6899999999999998888888899999998888777766677542   22222   22236899999998544 66777


Q ss_pred             hccccCCEEEEe
Q 018067          266 GLLKSQGKLVLV  277 (361)
Q Consensus       266 ~~l~~~G~~v~~  277 (361)
                      ..++++..++..
T Consensus        78 ~~l~~~~~vv~~   89 (259)
T 2ahr_A           78 KPLHFKQPIISM   89 (259)
T ss_dssp             TTSCCCSCEEEC
T ss_pred             HHhccCCEEEEe
Confidence            777766656655

>4g2n_A D-isomer specific 2-hydroxyacid dehydrogenase, Na; structural genomics, protein structure initiative, nysgrc, P biology; 1.70A {Polaromonas SP}

Probab=96.24  E-value=0.013  Score=53.33  Aligned_cols=88  Identities=15%  Similarity=0.249  Sum_probs=63.8

Q ss_pred             CCCEEEEEcCChHHHHHHHHHHHcCCeEEEEeCCchhHHHHHHHcCCCEEecCCCHHHHHHhcCCccEEEEcCCCc----
Q 018067          183 PGMHVGVVGLGGLGHVAVKFAKAMGVKVTVISTSPSKKSEAIERLGADSFLVSRDQDEMQAAMGTMDGIIDTVSAV----  258 (361)
Q Consensus       183 ~g~~vlV~Gag~vG~~a~~la~~~g~~vi~~~~~~~~~~~~~~~~g~~~vv~~~~~~~~~~~~~g~d~vid~~g~~----  258 (361)
                      .|++|.|+|.|.+|..+++.++.+|.+|++.+++.......   .|+..+   .   .+.++....|+|+-++...    
T Consensus       172 ~gktvGIIGlG~IG~~vA~~l~~~G~~V~~~dr~~~~~~~~---~g~~~~---~---~l~ell~~sDvV~l~~Plt~~T~  242 (345)
T 4g2n_A          172 TGRRLGIFGMGRIGRAIATRARGFGLAIHYHNRTRLSHALE---EGAIYH---D---TLDSLLGASDIFLIAAPGRPELK  242 (345)
T ss_dssp             TTCEEEEESCSHHHHHHHHHHHTTTCEEEEECSSCCCHHHH---TTCEEC---S---SHHHHHHTCSEEEECSCCCGGGT
T ss_pred             CCCEEEEEEeChhHHHHHHHHHHCCCEEEEECCCCcchhhh---cCCeEe---C---CHHHHHhhCCEEEEecCCCHHHH
Confidence            57899999999999999999999999999998876433222   244321   1   2334445689999888742    


Q ss_pred             ccH-HHHHhccccCCEEEEecC
Q 018067          259 HPL-MPLIGLLKSQGKLVLVGA  279 (361)
Q Consensus       259 ~~~-~~~~~~l~~~G~~v~~g~  279 (361)
                      ..+ ...+..++++..+|.++.
T Consensus       243 ~li~~~~l~~mk~gailIN~aR  264 (345)
T 4g2n_A          243 GFLDHDRIAKIPEGAVVINISR  264 (345)
T ss_dssp             TCBCHHHHHHSCTTEEEEECSC
T ss_pred             HHhCHHHHhhCCCCcEEEECCC
Confidence            112 467788899999999874

>3s8m_A Enoyl-ACP reductase; rossmann fold, oxidoreductase, NADH binding, fatty acid SYNT enoyl-ACP; 1.60A {Xanthomonas oryzae PV}

Probab=96.23  E-value=0.015  Score=54.20  Aligned_cols=79  Identities=16%  Similarity=0.162  Sum_probs=54.3

Q ss_pred             CCC-CCCCEEEEEcC-ChHHHHHHHHHHH-cCCeEEEEeCCchhH---------------HHHHHHcCCCEE---ecCCC
Q 018067          179 GLD-KPGMHVGVVGL-GGLGHVAVKFAKA-MGVKVTVISTSPSKK---------------SEAIERLGADSF---LVSRD  237 (361)
Q Consensus       179 ~~~-~~g~~vlV~Ga-g~vG~~a~~la~~-~g~~vi~~~~~~~~~---------------~~~~~~~g~~~v---v~~~~  237 (361)
                      ..+ +.++++||.|+ +++|++++..+.. .|++|+++++..+..               .+.++..|....   .|-.+
T Consensus        55 ~~~~~~gKvaLVTGASsGIG~AiA~~LA~~~GA~Vv~~~r~~~~~~~~~~~ag~~n~~a~~~~~~~~G~~a~~i~~Dvtd  134 (422)
T 3s8m_A           55 GVRNDGPKKVLVIGASSGYGLASRITAAFGFGADTLGVFFEKPGTASKAGTAGWYNSAAFDKHAKAAGLYSKSINGDAFS  134 (422)
T ss_dssp             CCCSSSCSEEEEESCSSHHHHHHHHHHHHHHCCEEEEEECCCCCCSSSCCCHHHHHHHHHHHHHHHTTCCEEEEESCTTS
T ss_pred             cccccCCCEEEEECCChHHHHHHHHHHHHhCCCEEEEEeCCchhhhhhhcccccchhHHHHHHHHhcCCcEEEEEecCCC
Confidence            444 46888999997 8999999998888 999999988765431               133455665432   24445


Q ss_pred             HHHH-------HHhc-CCccEEEEcCCC
Q 018067          238 QDEM-------QAAM-GTMDGIIDTVSA  257 (361)
Q Consensus       238 ~~~~-------~~~~-~g~d~vid~~g~  257 (361)
                      ++.+       .+.. +++|++++++|.
T Consensus       135 ~~~v~~~v~~i~~~~~G~IDiLVNNAG~  162 (422)
T 3s8m_A          135 DAARAQVIELIKTEMGGQVDLVVYSLAS  162 (422)
T ss_dssp             HHHHHHHHHHHHHHSCSCEEEEEECCCC
T ss_pred             HHHHHHHHHHHHHHcCCCCCEEEEcCcc
Confidence            4322       2333 679999999886

>3c1o_A Eugenol synthase; phenylpropene, PIP reductase, short-chain dehydrogenase/reductase, oxidoreductase; HET: NAP; 1.80A {Clarkia breweri}

Probab=96.23  E-value=0.018  Score=51.51  Aligned_cols=92  Identities=12%  Similarity=0.156  Sum_probs=63.4

Q ss_pred             CCEEEEEcC-ChHHHHHHHHHHHcCCeEEEEeCCc------hhHHHHH--HHcCCCE-EecCCCHHHHHHhcCCccEEEE
Q 018067          184 GMHVGVVGL-GGLGHVAVKFAKAMGVKVTVISTSP------SKKSEAI--ERLGADS-FLVSRDQDEMQAAMGTMDGIID  253 (361)
Q Consensus       184 g~~vlV~Ga-g~vG~~a~~la~~~g~~vi~~~~~~------~~~~~~~--~~~g~~~-vv~~~~~~~~~~~~~g~d~vid  253 (361)
                      ..+|||+|+ |.+|..+++.+...|.+|++++++.      ++...+.  +..++.. ..|..+++.+.++..++|+||.
T Consensus         4 ~~~ilVtGatG~iG~~l~~~L~~~g~~V~~~~R~~~~~~~~~~~~~l~~~~~~~v~~v~~D~~d~~~l~~a~~~~d~vi~   83 (321)
T 3c1o_A            4 MEKIIIYGGTGYIGKFMVRASLSFSHPTFIYARPLTPDSTPSSVQLREEFRSMGVTIIEGEMEEHEKMVSVLKQVDIVIS   83 (321)
T ss_dssp             CCCEEEETTTSTTHHHHHHHHHHTTCCEEEEECCCCTTCCHHHHHHHHHHHHTTCEEEECCTTCHHHHHHHHTTCSEEEE
T ss_pred             ccEEEEEcCCchhHHHHHHHHHhCCCcEEEEECCcccccChHHHHHHHHhhcCCcEEEEecCCCHHHHHHHHcCCCEEEE
Confidence            356999998 9999999999998999999999875      2222221  2235542 2466777778787789999999


Q ss_pred             cCCCcc--cHHHHHhccccC---CEEE
Q 018067          254 TVSAVH--PLMPLIGLLKSQ---GKLV  275 (361)
Q Consensus       254 ~~g~~~--~~~~~~~~l~~~---G~~v  275 (361)
                      +++...  .....++.++..   ++++
T Consensus        84 ~a~~~~~~~~~~l~~aa~~~g~v~~~v  110 (321)
T 3c1o_A           84 ALPFPMISSQIHIINAIKAAGNIKRFL  110 (321)
T ss_dssp             CCCGGGSGGGHHHHHHHHHHCCCCEEE
T ss_pred             CCCccchhhHHHHHHHHHHhCCccEEe
Confidence            998531  234455555433   4776

>3rft_A Uronate dehydrogenase; apoenzyme, rossmann fold, NAD binding, oxidoreductase; 1.90A {Agrobacterium tumefaciens} PDB: 3rfv_A* 3rfx_A*

Probab=96.23  E-value=0.0032  Score=55.12  Aligned_cols=70  Identities=20%  Similarity=0.198  Sum_probs=54.0

Q ss_pred             CCEEEEEcC-ChHHHHHHHHHHHcCCeEEEEeCCchhHHHHHHHcCCC-EEecCCCHHHHHHhcCCccEEEEcCCC
Q 018067          184 GMHVGVVGL-GGLGHVAVKFAKAMGVKVTVISTSPSKKSEAIERLGAD-SFLVSRDQDEMQAAMGTMDGIIDTVSA  257 (361)
Q Consensus       184 g~~vlV~Ga-g~vG~~a~~la~~~g~~vi~~~~~~~~~~~~~~~~g~~-~vv~~~~~~~~~~~~~g~d~vid~~g~  257 (361)
                      +++|||.|+ |.+|..+++.+...|++|+++++++.+..    ..+.. ...|..+.+.+.++..++|++|+++|.
T Consensus         3 ~k~vlVTGasg~IG~~la~~L~~~G~~V~~~~r~~~~~~----~~~~~~~~~Dl~d~~~~~~~~~~~D~vi~~Ag~   74 (267)
T 3rft_A            3 MKRLLVTGAAGQLGRVMRERLAPMAEILRLADLSPLDPA----GPNEECVQCDLADANAVNAMVAGCDGIVHLGGI   74 (267)
T ss_dssp             EEEEEEESTTSHHHHHHHHHTGGGEEEEEEEESSCCCCC----CTTEEEEECCTTCHHHHHHHHTTCSEEEECCSC
T ss_pred             CCEEEEECCCCHHHHHHHHHHHhcCCEEEEEecCCcccc----CCCCEEEEcCCCCHHHHHHHHcCCCEEEECCCC
Confidence            467999997 99999999999999999999998875432    11222 223566777788888899999999875

>2nm0_A Probable 3-oxacyl-(acyl-carrier-protein) reductas; oxidoreductase; 1.99A {Streptomyces coelicolor}

Probab=96.23  E-value=0.0099  Score=51.60  Aligned_cols=69  Identities=19%  Similarity=0.156  Sum_probs=50.2

Q ss_pred             CCCEEEEEcC-ChHHHHHHHHHHHcCCeEEEEeCCchhHHHHHHHcCCC-EEecCCCHHHHHHh-------cCCccEEEE
Q 018067          183 PGMHVGVVGL-GGLGHVAVKFAKAMGVKVTVISTSPSKKSEAIERLGAD-SFLVSRDQDEMQAA-------MGTMDGIID  253 (361)
Q Consensus       183 ~g~~vlV~Ga-g~vG~~a~~la~~~g~~vi~~~~~~~~~~~~~~~~g~~-~vv~~~~~~~~~~~-------~~g~d~vid  253 (361)
                      .++++||.|+ |++|.++++.+...|++|++++++.++...      +. ...|..+++.+.++       .+++|++|+
T Consensus        20 ~~k~vlVTGas~gIG~aia~~l~~~G~~V~~~~r~~~~~~~------~~~~~~Dl~d~~~v~~~~~~~~~~~g~iD~lv~   93 (253)
T 2nm0_A           20 MSRSVLVTGGNRGIGLAIARAFADAGDKVAITYRSGEPPEG------FLAVKCDITDTEQVEQAYKEIEETHGPVEVLIA   93 (253)
T ss_dssp             CCCEEEEETTTSHHHHHHHHHHHHTTCEEEEEESSSCCCTT------SEEEECCTTSHHHHHHHHHHHHHHTCSCSEEEE
T ss_pred             CCCEEEEeCCCCHHHHHHHHHHHHCCCEEEEEeCChHhhcc------ceEEEecCCCHHHHHHHHHHHHHHcCCCCEEEE
Confidence            4688999998 999999999999999999999987654321      21 12355555443332       246899999


Q ss_pred             cCCC
Q 018067          254 TVSA  257 (361)
Q Consensus       254 ~~g~  257 (361)
                      ++|.
T Consensus        94 nAg~   97 (253)
T 2nm0_A           94 NAGV   97 (253)
T ss_dssp             ECSC
T ss_pred             CCCC
Confidence            9885

>2hnk_A SAM-dependent O-methyltransferase; modified rossman fold; HET: SAH; 2.30A {Leptospira interrogans}

Probab=96.21  E-value=0.0078  Score=51.64  Aligned_cols=97  Identities=19%  Similarity=0.135  Sum_probs=65.9

Q ss_pred             CCCCCEEEEEcCChHHHHHHHHHHHc--CCeEEEEeCCchhHHHHHHH---cCCC--EEecCCC-HHHHHHh--------
Q 018067          181 DKPGMHVGVVGLGGLGHVAVKFAKAM--GVKVTVISTSPSKKSEAIER---LGAD--SFLVSRD-QDEMQAA--------  244 (361)
Q Consensus       181 ~~~g~~vlV~Gag~vG~~a~~la~~~--g~~vi~~~~~~~~~~~~~~~---~g~~--~vv~~~~-~~~~~~~--------  244 (361)
                      ..++++||-+|+| .|..+..+++..  +.+|+.++.+++....+.+.   .|..  ..+...+ .+.+..+        
T Consensus        58 ~~~~~~VLdiG~G-~G~~~~~la~~~~~~~~v~~vD~~~~~~~~a~~~~~~~g~~~~v~~~~~d~~~~~~~~~~~~~~~~  136 (239)
T 2hnk_A           58 ISGAKRIIEIGTF-TGYSSLCFASALPEDGKILCCDVSEEWTNVARKYWKENGLENKIFLKLGSALETLQVLIDSKSAPS  136 (239)
T ss_dssp             HHTCSEEEEECCT-TCHHHHHHHHHSCTTCEEEEEESCHHHHHHHHHHHHHTTCGGGEEEEESCHHHHHHHHHHCSSCCG
T ss_pred             hhCcCEEEEEeCC-CCHHHHHHHHhCCCCCEEEEEECCHHHHHHHHHHHHHcCCCCCEEEEECCHHHHHHHHHhhccccc
Confidence            4578899999988 488899999987  57999999888765444332   3542  1122222 2323333        


Q ss_pred             -------c-CCccEEEEcCCCc---ccHHHHHhccccCCEEEEec
Q 018067          245 -------M-GTMDGIIDTVSAV---HPLMPLIGLLKSQGKLVLVG  278 (361)
Q Consensus       245 -------~-~g~d~vid~~g~~---~~~~~~~~~l~~~G~~v~~g  278 (361)
                             . +.+|+||......   ..+..+.+.|+++|.++...
T Consensus       137 ~~~~f~~~~~~fD~I~~~~~~~~~~~~l~~~~~~L~pgG~lv~~~  181 (239)
T 2hnk_A          137 WASDFAFGPSSIDLFFLDADKENYPNYYPLILKLLKPGGLLIADN  181 (239)
T ss_dssp             GGTTTCCSTTCEEEEEECSCGGGHHHHHHHHHHHEEEEEEEEEEC
T ss_pred             ccccccCCCCCcCEEEEeCCHHHHHHHHHHHHHHcCCCeEEEEEc
Confidence                   2 6799998876654   33577889999999998753

>2d0i_A Dehydrogenase; structural genomics, NPPSFA, national project protein structural and functional analyses; 1.95A {Pyrococcus horikoshii}

Probab=96.21  E-value=0.02  Score=51.84  Aligned_cols=88  Identities=23%  Similarity=0.311  Sum_probs=61.0

Q ss_pred             CCCCEEEEEcCChHHHHHHHHHHHcCCeEEEEeCCchhHHHHHHHcCCCEEecCCCHHHHHHhcCCccEEEEcCCCc---
Q 018067          182 KPGMHVGVVGLGGLGHVAVKFAKAMGVKVTVISTSPSKKSEAIERLGADSFLVSRDQDEMQAAMGTMDGIIDTVSAV---  258 (361)
Q Consensus       182 ~~g~~vlV~Gag~vG~~a~~la~~~g~~vi~~~~~~~~~~~~~~~~g~~~vv~~~~~~~~~~~~~g~d~vid~~g~~---  258 (361)
                      -.|.+|.|+|.|.+|...++.++..|.+|++.+++.+. . ..+++|+..  .  +.   .++....|+|+.++...   
T Consensus       144 l~g~~vgIIG~G~iG~~vA~~l~~~G~~V~~~d~~~~~-~-~~~~~g~~~--~--~l---~e~l~~aDiVil~vp~~~~t  214 (333)
T 2d0i_A          144 LYGKKVGILGMGAIGKAIARRLIPFGVKLYYWSRHRKV-N-VEKELKARY--M--DI---DELLEKSDIVILALPLTRDT  214 (333)
T ss_dssp             STTCEEEEECCSHHHHHHHHHHGGGTCEEEEECSSCCH-H-HHHHHTEEE--C--CH---HHHHHHCSEEEECCCCCTTT
T ss_pred             CCcCEEEEEccCHHHHHHHHHHHHCCCEEEEECCCcch-h-hhhhcCcee--c--CH---HHHHhhCCEEEEcCCCChHH
Confidence            46889999999999999999999999999999988765 2 234556431  1  21   12223578888887764   


Q ss_pred             -ccH-HHHHhccccCCEEEEecC
Q 018067          259 -HPL-MPLIGLLKSQGKLVLVGA  279 (361)
Q Consensus       259 -~~~-~~~~~~l~~~G~~v~~g~  279 (361)
                       ..+ ...+..++++ .++.++.
T Consensus       215 ~~~i~~~~~~~mk~g-ilin~sr  236 (333)
T 2d0i_A          215 YHIINEERVKKLEGK-YLVNIGR  236 (333)
T ss_dssp             TTSBCHHHHHHTBTC-EEEECSC
T ss_pred             HHHhCHHHHhhCCCC-EEEECCC
Confidence             112 2346677777 7777763

>1j4a_A D-LDH, D-lactate dehydrogenase; NAD-dependent dehydrogenase, reversible interconversion of pyruvate INTO D-lactate; 1.90A {Lactobacillus delbrueckii subsp} SCOP: c.2.1.4 c.23.12.1 PDB: 1j49_A* 2dld_A*

Probab=96.21  E-value=0.013  Score=53.20  Aligned_cols=87  Identities=23%  Similarity=0.245  Sum_probs=63.6

Q ss_pred             CCCEEEEEcCChHHHHHHHHHHHcCCeEEEEeCCchhHHHHHHHcCCCEEecCCCHHHHHHhcCCccEEEEcCCCcc---
Q 018067          183 PGMHVGVVGLGGLGHVAVKFAKAMGVKVTVISTSPSKKSEAIERLGADSFLVSRDQDEMQAAMGTMDGIIDTVSAVH---  259 (361)
Q Consensus       183 ~g~~vlV~Gag~vG~~a~~la~~~g~~vi~~~~~~~~~~~~~~~~g~~~vv~~~~~~~~~~~~~g~d~vid~~g~~~---  259 (361)
                      .|.+|.|+|.|.+|...++.++.+|++|++.+++.++.  + +++ +.. .  .+   +.++....|+|+.++....   
T Consensus       145 ~g~~vgIiG~G~IG~~~A~~l~~~G~~V~~~d~~~~~~--~-~~~-~~~-~--~~---l~ell~~aDvV~l~~p~~~~t~  214 (333)
T 1j4a_A          145 RDQVVGVVGTGHIGQVFMQIMEGFGAKVITYDIFRNPE--L-EKK-GYY-V--DS---LDDLYKQADVISLHVPDVPANV  214 (333)
T ss_dssp             GGSEEEEECCSHHHHHHHHHHHHTTCEEEEECSSCCHH--H-HHT-TCB-C--SC---HHHHHHHCSEEEECSCCCGGGT
T ss_pred             CCCEEEEEccCHHHHHHHHHHHHCCCEEEEECCCcchh--H-Hhh-Cee-c--CC---HHHHHhhCCEEEEcCCCcHHHH
Confidence            57899999999999999999999999999999877653  2 332 321 1  12   2233346899999887532   


Q ss_pred             -cH-HHHHhccccCCEEEEecC
Q 018067          260 -PL-MPLIGLLKSQGKLVLVGA  279 (361)
Q Consensus       260 -~~-~~~~~~l~~~G~~v~~g~  279 (361)
                       .+ ...+..+++++.++.++.
T Consensus       215 ~li~~~~l~~mk~ga~lIn~ar  236 (333)
T 1j4a_A          215 HMINDESIAKMKQDVVIVNVSR  236 (333)
T ss_dssp             TCBSHHHHHHSCTTEEEEECSC
T ss_pred             HHHhHHHHhhCCCCcEEEECCC
Confidence             12 356788899999999875

>3m33_A Uncharacterized protein; structural genomics, PSI-2, protein structure initiative, MCSG, midwest center for structural genomics; 2.19A {Deinococcus radiodurans}

Probab=96.20  E-value=0.0076  Score=51.22  Aligned_cols=95  Identities=18%  Similarity=0.199  Sum_probs=65.3

Q ss_pred             CCCCEEEEEcCChHHHHHHHHHHHcCCeEEEEeCCchhHHHHHHHcCCCEEecCCCHHHHHHh-cCCccEEEEcCCCccc
Q 018067          182 KPGMHVGVVGLGGLGHVAVKFAKAMGVKVTVISTSPSKKSEAIERLGADSFLVSRDQDEMQAA-MGTMDGIIDTVSAVHP  260 (361)
Q Consensus       182 ~~g~~vlV~Gag~vG~~a~~la~~~g~~vi~~~~~~~~~~~~~~~~g~~~vv~~~~~~~~~~~-~~g~d~vid~~g~~~~  260 (361)
                      +++.+||-+|+|. |..+..+++. |++|+.++.++.....+.+......++..+-.+.+... .+.+|+|+....-...
T Consensus        47 ~~~~~vLDiGcG~-G~~~~~l~~~-~~~v~~vD~s~~~~~~a~~~~~~~~~~~~d~~~~~~~~~~~~fD~v~~~~~~~~~  124 (226)
T 3m33_A           47 TPQTRVLEAGCGH-GPDAARFGPQ-AARWAAYDFSPELLKLARANAPHADVYEWNGKGELPAGLGAPFGLIVSRRGPTSV  124 (226)
T ss_dssp             CTTCEEEEESCTT-SHHHHHHGGG-SSEEEEEESCHHHHHHHHHHCTTSEEEECCSCSSCCTTCCCCEEEEEEESCCSGG
T ss_pred             CCCCeEEEeCCCC-CHHHHHHHHc-CCEEEEEECCHHHHHHHHHhCCCceEEEcchhhccCCcCCCCEEEEEeCCCHHHH
Confidence            6788999999864 6777777776 88999999998776666444222222222111111111 3479999988766667


Q ss_pred             HHHHHhccccCCEEEEec
Q 018067          261 LMPLIGLLKSQGKLVLVG  278 (361)
Q Consensus       261 ~~~~~~~l~~~G~~v~~g  278 (361)
                      +..+.+.|+++|+++..+
T Consensus       125 l~~~~~~LkpgG~l~~~~  142 (226)
T 3m33_A          125 ILRLPELAAPDAHFLYVG  142 (226)
T ss_dssp             GGGHHHHEEEEEEEEEEE
T ss_pred             HHHHHHHcCCCcEEEEeC
Confidence            889999999999999443

>1nkv_A Hypothetical protein YJHP; structural genomics, PSI, protein structure initiative, northeast structural genomics consortium, NESG; 2.90A {Escherichia coli} SCOP: c.66.1.21

Probab=96.18  E-value=0.017  Score=49.84  Aligned_cols=98  Identities=21%  Similarity=0.194  Sum_probs=64.6

Q ss_pred             CCCCCCCEEEEEcCChHHHHHHHHHHHcCCeEEEEeCCchhHHHHHH---HcCCC--EEecCCCHHHHHHhcCCccEEEE
Q 018067          179 GLDKPGMHVGVVGLGGLGHVAVKFAKAMGVKVTVISTSPSKKSEAIE---RLGAD--SFLVSRDQDEMQAAMGTMDGIID  253 (361)
Q Consensus       179 ~~~~~g~~vlV~Gag~vG~~a~~la~~~g~~vi~~~~~~~~~~~~~~---~~g~~--~vv~~~~~~~~~~~~~g~d~vid  253 (361)
                      ..++++.+||-+|+|. |..+..+++..+.+|+.++.+++....+.+   ..|..  .-+...+..... ..+.+|+|+-
T Consensus        32 ~~~~~~~~VLDiGcG~-G~~~~~la~~~~~~v~gvD~s~~~l~~a~~~~~~~~~~~~v~~~~~d~~~~~-~~~~fD~V~~  109 (256)
T 1nkv_A           32 LRMKPGTRILDLGSGS-GEMLCTWARDHGITGTGIDMSSLFTAQAKRRAEELGVSERVHFIHNDAAGYV-ANEKCDVAAC  109 (256)
T ss_dssp             TCCCTTCEEEEETCTT-CHHHHHHHHHTCCEEEEEESCHHHHHHHHHHHHHTTCTTTEEEEESCCTTCC-CSSCEEEEEE
T ss_pred             cCCCCCCEEEEECCCC-CHHHHHHHHhcCCeEEEEeCCHHHHHHHHHHHHhcCCCcceEEEECChHhCC-cCCCCCEEEE
Confidence            3468999999999876 888889998889999999998876554432   23431  111111111111 1347999985


Q ss_pred             cCC------CcccHHHHHhccccCCEEEEec
Q 018067          254 TVS------AVHPLMPLIGLLKSQGKLVLVG  278 (361)
Q Consensus       254 ~~g------~~~~~~~~~~~l~~~G~~v~~g  278 (361)
                      .-.      -...+..+.+.|+|+|+++...
T Consensus       110 ~~~~~~~~~~~~~l~~~~r~LkpgG~l~~~~  140 (256)
T 1nkv_A          110 VGATWIAGGFAGAEELLAQSLKPGGIMLIGE  140 (256)
T ss_dssp             ESCGGGTSSSHHHHHHHTTSEEEEEEEEEEE
T ss_pred             CCChHhcCCHHHHHHHHHHHcCCCeEEEEec
Confidence            321      1234778889999999998764

>1vpd_A Tartronate semialdehyde reductase; structural genomics, MCSG, protein structure initiative, PSI, midwest center for structural genomics; HET: MSE TLA; 1.65A {Salmonella typhimurium} SCOP: a.100.1.1 c.2.1.6

Probab=96.16  E-value=0.014  Score=51.86  Aligned_cols=87  Identities=22%  Similarity=0.277  Sum_probs=61.2

Q ss_pred             EEEEEcCChHHHHHHHHHHHcCCeEEEEeCCchhHHHHHHHcCCCEEecCCCHHHHHHhcCCccEEEEcCCCcccHHHHH
Q 018067          186 HVGVVGLGGLGHVAVKFAKAMGVKVTVISTSPSKKSEAIERLGADSFLVSRDQDEMQAAMGTMDGIIDTVSAVHPLMPLI  265 (361)
Q Consensus       186 ~vlV~Gag~vG~~a~~la~~~g~~vi~~~~~~~~~~~~~~~~g~~~vv~~~~~~~~~~~~~g~d~vid~~g~~~~~~~~~  265 (361)
                      +|.|+|+|.+|...+..+...|.+|++.++++++.+.+. +.|...   ..+.+   +...++|+||.++..+..+...+
T Consensus         7 ~i~iiG~G~~G~~~a~~l~~~g~~V~~~~~~~~~~~~~~-~~g~~~---~~~~~---~~~~~~D~vi~~v~~~~~~~~~~   79 (299)
T 1vpd_A            7 KVGFIGLGIMGKPMSKNLLKAGYSLVVSDRNPEAIADVI-AAGAET---ASTAK---AIAEQCDVIITMLPNSPHVKEVA   79 (299)
T ss_dssp             EEEEECCSTTHHHHHHHHHHTTCEEEEECSCHHHHHHHH-HTTCEE---CSSHH---HHHHHCSEEEECCSSHHHHHHHH
T ss_pred             eEEEECchHHHHHHHHHHHhCCCEEEEEeCCHHHHHHHH-HCCCee---cCCHH---HHHhCCCEEEEECCCHHHHHHHH
Confidence            699999999999999999888999999998887776664 446432   22222   22235899999998654344444


Q ss_pred             -------hccccCCEEEEecC
Q 018067          266 -------GLLKSQGKLVLVGA  279 (361)
Q Consensus       266 -------~~l~~~G~~v~~g~  279 (361)
                             ..++++..++.++.
T Consensus        80 ~~~~~l~~~l~~~~~vv~~s~  100 (299)
T 1vpd_A           80 LGENGIIEGAKPGTVLIDMSS  100 (299)
T ss_dssp             HSTTCHHHHCCTTCEEEECSC
T ss_pred             hCcchHhhcCCCCCEEEECCC
Confidence                   45667777777653

>1nvm_B Acetaldehyde dehydrogenase (acylating), 4-hydroxy-2-oxovalerate aldolase; sequestered tunnel, substrate channeling; HET: NAD; 1.70A {Pseudomonas SP} SCOP: c.2.1.3 d.81.1.1

Probab=96.16  E-value=0.013  Score=52.49  Aligned_cols=91  Identities=13%  Similarity=0.143  Sum_probs=62.0

Q ss_pred             CEEEEEcCChHHHHHHHHHHH--cCCeEEEEeCCc-hh-HHHHHHHcCCCEEecCCCHHHHHHhc--CCccEEEEcCCCc
Q 018067          185 MHVGVVGLGGLGHVAVKFAKA--MGVKVTVISTSP-SK-KSEAIERLGADSFLVSRDQDEMQAAM--GTMDGIIDTVSAV  258 (361)
Q Consensus       185 ~~vlV~Gag~vG~~a~~la~~--~g~~vi~~~~~~-~~-~~~~~~~~g~~~vv~~~~~~~~~~~~--~g~d~vid~~g~~  258 (361)
                      -+|.|+|+|.+|...+..+..  -+.+++.+++.. ++ ...+++++|....  +.+.+.+.+.+  .++|+||++++..
T Consensus         5 irVaIIG~G~iG~~~~~~l~~~~~~~elvav~d~~~~~~~~~~a~~~g~~~~--~~~~e~ll~~~~~~~iDvV~~atp~~   82 (312)
T 1nvm_B            5 LKVAIIGSGNIGTDLMIKVLRNAKYLEMGAMVGIDAASDGLARAQRMGVTTT--YAGVEGLIKLPEFADIDFVFDATSAS   82 (312)
T ss_dssp             EEEEEECCSHHHHHHHHHHHHHCSSEEEEEEECSCTTCHHHHHHHHTTCCEE--SSHHHHHHHSGGGGGEEEEEECSCHH
T ss_pred             CEEEEEcCcHHHHHHHHHHHhhCcCeEEEEEEeCChhhhHHHHHHHcCCCcc--cCCHHHHHhccCCCCCcEEEECCChH
Confidence            468999999999998888843  466666655544 44 4566678887532  22223332221  3699999999976


Q ss_pred             ccHHHHHhcccc--CCEEEEe
Q 018067          259 HPLMPLIGLLKS--QGKLVLV  277 (361)
Q Consensus       259 ~~~~~~~~~l~~--~G~~v~~  277 (361)
                      .....+..+++.  |..++..
T Consensus        83 ~h~~~a~~al~a~~Gk~Vi~e  103 (312)
T 1nvm_B           83 AHVQNEALLRQAKPGIRLIDL  103 (312)
T ss_dssp             HHHHHHHHHHHHCTTCEEEEC
T ss_pred             HHHHHHHHHHHhCCCCEEEEc
Confidence            556778888887  8887764

>3m2p_A UDP-N-acetylglucosamine 4-epimerase; SGXNY, 11155J, isomerase, structural genomics, PSI-2, protein structure initiative; HET: UDP; 2.95A {Bacillus cereus}

Probab=96.16  E-value=0.021  Score=50.87  Aligned_cols=90  Identities=14%  Similarity=0.206  Sum_probs=62.1

Q ss_pred             CEEEEEcC-ChHHHHHHHHHHHcCCeEEEEeCCchhHHHHHHHcCCCE-EecCCCHHHHHHhcCCccEEEEcCCCccc--
Q 018067          185 MHVGVVGL-GGLGHVAVKFAKAMGVKVTVISTSPSKKSEAIERLGADS-FLVSRDQDEMQAAMGTMDGIIDTVSAVHP--  260 (361)
Q Consensus       185 ~~vlV~Ga-g~vG~~a~~la~~~g~~vi~~~~~~~~~~~~~~~~g~~~-vv~~~~~~~~~~~~~g~d~vid~~g~~~~--  260 (361)
                      .+|||+|+ |.+|...++.+...|.+|+++++++.... + +  +... ..|.. .+.+.++..++|+||++++....  
T Consensus         3 ~~vlVtGatG~iG~~l~~~L~~~g~~V~~~~r~~~~~~-~-~--~~~~~~~Dl~-~~~~~~~~~~~d~Vih~a~~~~~~~   77 (311)
T 3m2p_A            3 LKIAVTGGTGFLGQYVVESIKNDGNTPIILTRSIGNKA-I-N--DYEYRVSDYT-LEDLINQLNDVDAVVHLAATRGSQG   77 (311)
T ss_dssp             CEEEEETTTSHHHHHHHHHHHHTTCEEEEEESCCC---------CCEEEECCCC-HHHHHHHTTTCSEEEECCCCCCSSS
T ss_pred             CEEEEECCCcHHHHHHHHHHHhCCCEEEEEeCCCCccc-C-C--ceEEEEcccc-HHHHHHhhcCCCEEEEccccCCCCC
Confidence            57999997 99999999999999999999999854433 3 2  4432 23555 77777777899999999885321  


Q ss_pred             -----------HHHHHhccccC--CEEEEecC
Q 018067          261 -----------LMPLIGLLKSQ--GKLVLVGA  279 (361)
Q Consensus       261 -----------~~~~~~~l~~~--G~~v~~g~  279 (361)
                                 ....++.++..  .++|.+++
T Consensus        78 ~~~~~~~n~~~~~~ll~a~~~~~~~r~v~~SS  109 (311)
T 3m2p_A           78 KISEFHDNEILTQNLYDACYENNISNIVYAST  109 (311)
T ss_dssp             CGGGTHHHHHHHHHHHHHHHHTTCCEEEEEEE
T ss_pred             hHHHHHHHHHHHHHHHHHHHHcCCCEEEEEcc
Confidence                       12344444433  47887764

>3eey_A Putative rRNA methylase; rRNA methylation, S-adenosyl-methionine, structural genomics structure initiative, PSI; HET: SAM; 2.20A {Clostridium thermocellum atcc 27405}

Probab=96.16  E-value=0.0089  Score=49.43  Aligned_cols=98  Identities=16%  Similarity=0.164  Sum_probs=64.8

Q ss_pred             CCCCCEEEEEcCChHHHHHHHHHHHcC--CeEEEEeCCchhHHHHHH---HcCC--CEEecCCCHHHHH-HhcCCccEEE
Q 018067          181 DKPGMHVGVVGLGGLGHVAVKFAKAMG--VKVTVISTSPSKKSEAIE---RLGA--DSFLVSRDQDEMQ-AAMGTMDGII  252 (361)
Q Consensus       181 ~~~g~~vlV~Gag~vG~~a~~la~~~g--~~vi~~~~~~~~~~~~~~---~~g~--~~vv~~~~~~~~~-~~~~g~d~vi  252 (361)
                      ++++++||-+|+|. |..+..+++..+  .+++.++.+++....+.+   ..|.  ..-+...+..... ...+.+|+|+
T Consensus        20 ~~~~~~vLDlGcG~-G~~~~~l~~~~~~~~~v~~vD~s~~~~~~a~~~~~~~~~~~~v~~~~~d~~~~~~~~~~~fD~v~   98 (197)
T 3eey_A           20 VKEGDTVVDATCGN-GNDTAFLASLVGENGRVFGFDIQDKAIANTTKKLTDLNLIDRVTLIKDGHQNMDKYIDCPVKAVM   98 (197)
T ss_dssp             CCTTCEEEESCCTT-SHHHHHHHHHHCTTCEEEEECSCHHHHHHHHHHHHHTTCGGGEEEECSCGGGGGGTCCSCEEEEE
T ss_pred             CCCCCEEEEcCCCC-CHHHHHHHHHhCCCCEEEEEECCHHHHHHHHHHHHHcCCCCCeEEEECCHHHHhhhccCCceEEE
Confidence            57899999999876 788888888864  599999988766544433   2333  2222222322222 2235799998


Q ss_pred             EcCCC---------------cccHHHHHhccccCCEEEEecC
Q 018067          253 DTVSA---------------VHPLMPLIGLLKSQGKLVLVGA  279 (361)
Q Consensus       253 d~~g~---------------~~~~~~~~~~l~~~G~~v~~g~  279 (361)
                      -..+-               ...+..+.+.|+++|+++....
T Consensus        99 ~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~Lk~gG~l~~~~~  140 (197)
T 3eey_A           99 FNLGYLPSGDHSISTRPETTIQALSKAMELLVTGGIITVVIY  140 (197)
T ss_dssp             EEESBCTTSCTTCBCCHHHHHHHHHHHHHHEEEEEEEEEEEC
T ss_pred             EcCCcccCcccccccCcccHHHHHHHHHHhCcCCCEEEEEEc
Confidence            65432               1347888999999999988754

>1sb8_A WBPP; epimerase, 4-epimerase, UDP-galnac, UDP-GLCNAC, SDR, G SYK, UDP, N-acetylglucosamine, N- acetylgalactosamine, UDP-GLC, isomerase; HET: NAD UD2; 2.10A {Pseudomonas aeruginosa} SCOP: c.2.1.2 PDB: 1sb9_A*

Probab=96.15  E-value=0.02  Score=52.00  Aligned_cols=75  Identities=13%  Similarity=0.079  Sum_probs=54.2

Q ss_pred             CCCEEEEEcC-ChHHHHHHHHHHHcCCeEEEEeCCch----hHHHHHHHc------CCCE-EecCCCHHHHHHhcCCccE
Q 018067          183 PGMHVGVVGL-GGLGHVAVKFAKAMGVKVTVISTSPS----KKSEAIERL------GADS-FLVSRDQDEMQAAMGTMDG  250 (361)
Q Consensus       183 ~g~~vlV~Ga-g~vG~~a~~la~~~g~~vi~~~~~~~----~~~~~~~~~------g~~~-vv~~~~~~~~~~~~~g~d~  250 (361)
                      .+.+|||+|+ |.+|..++..+...|.+|+++++...    +...+.+.+      +... ..|..+.+.+.++..++|+
T Consensus        26 ~~~~vlVtGatG~iG~~l~~~L~~~g~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~~~~~Dl~d~~~~~~~~~~~d~  105 (352)
T 1sb8_A           26 QPKVWLITGVAGFIGSNLLETLLKLDQKVVGLDNFATGHQRNLDEVRSLVSEKQWSNFKFIQGDIRNLDDCNNACAGVDY  105 (352)
T ss_dssp             SCCEEEEETTTSHHHHHHHHHHHHTTCEEEEEECCSSCCHHHHHHHHHHSCHHHHTTEEEEECCTTSHHHHHHHHTTCSE
T ss_pred             cCCeEEEECCCcHHHHHHHHHHHHCCCEEEEEeCCCccchhhHHHHhhhcccccCCceEEEECCCCCHHHHHHHhcCCCE
Confidence            3568999998 99999999999989999999998653    223332222      2221 2355666667777779999


Q ss_pred             EEEcCCC
Q 018067          251 IIDTVSA  257 (361)
Q Consensus       251 vid~~g~  257 (361)
                      ||++++.
T Consensus       106 vih~A~~  112 (352)
T 1sb8_A          106 VLHQAAL  112 (352)
T ss_dssp             EEECCSC
T ss_pred             EEECCcc
Confidence            9999985

>4e4y_A Short chain dehydrogenase family protein; structural genomics, the center for structural genomics of I diseases, csgid, niaid; 1.80A {Francisella tularensis subsp}

Probab=96.15  E-value=0.0053  Score=52.91  Aligned_cols=94  Identities=20%  Similarity=0.168  Sum_probs=60.0

Q ss_pred             CCCEEEEEcC-ChHHHHHHHHHHH-cCCeEEEEeCCchhHHHHHHHcCCCEEecCCCHHHHHHhc-----CCccEEEEcC
Q 018067          183 PGMHVGVVGL-GGLGHVAVKFAKA-MGVKVTVISTSPSKKSEAIERLGADSFLVSRDQDEMQAAM-----GTMDGIIDTV  255 (361)
Q Consensus       183 ~g~~vlV~Ga-g~vG~~a~~la~~-~g~~vi~~~~~~~~~~~~~~~~g~~~vv~~~~~~~~~~~~-----~g~d~vid~~  255 (361)
                      .++++||.|+ |++|.++++.+.. .|++|+++++.++....   .. .....|-.+++.+.++.     +++|++|+++
T Consensus         3 ~~k~vlITGas~gIG~~~a~~l~~~~g~~v~~~~~~~~~~~~---~~-~~~~~Dv~~~~~v~~~~~~~~~~~id~lv~nA   78 (244)
T 4e4y_A            3 AMANYLVTGGSKGIGKAVVELLLQNKNHTVINIDIQQSFSAE---NL-KFIKADLTKQQDITNVLDIIKNVSFDGIFLNA   78 (244)
T ss_dssp             CCEEEEEETTTSHHHHHHHHHHTTSTTEEEEEEESSCCCCCT---TE-EEEECCTTCHHHHHHHHHHTTTCCEEEEEECC
T ss_pred             CCCeEEEeCCCChHHHHHHHHHHhcCCcEEEEeccccccccc---cc-eEEecCcCCHHHHHHHHHHHHhCCCCEEEECC
Confidence            4678999997 9999999877766 78899988877541110   01 01123455554444332     3799999999


Q ss_pred             CCcc-------------------------cHHHHHhccccCCEEEEecCC
Q 018067          256 SAVH-------------------------PLMPLIGLLKSQGKLVLVGAP  280 (361)
Q Consensus       256 g~~~-------------------------~~~~~~~~l~~~G~~v~~g~~  280 (361)
                      |...                         ..+.++..++++|+++.+++.
T Consensus        79 g~~~~~~~~~~~~~~~~~~~~vN~~g~~~~~~~~~~~~~~~g~iv~~sS~  128 (244)
T 4e4y_A           79 GILIKGSIFDIDIESIKKVLDLNVWSSIYFIKGLENNLKVGASIVFNGSD  128 (244)
T ss_dssp             CCCCCBCTTTSCHHHHHHHHHHHTHHHHHHHHHTGGGEEEEEEEEEECCG
T ss_pred             ccCCCCCcccCCHHHHHHHHHHccHHHHHHHHHHHHHhccCcEEEEECCH
Confidence            8521                         122233455667899998764

>2gb4_A Thiopurine S-methyltransferase; 18204406, thiopurine methyltransferase, structural genomics, PSI, protein structure initiative; HET: SAH; 1.25A {Mus musculus} PDB: 3bgi_A* 3bgd_A* 2bzg_A* 2h11_A*

Probab=96.13  E-value=0.014  Score=50.69  Aligned_cols=95  Identities=18%  Similarity=0.122  Sum_probs=60.6

Q ss_pred             CCCCCEEEEEcCChHHHHHHHHHHHcCCeEEEEeCCchhHHHHHHHcCC---------------------CEEecCCCHH
Q 018067          181 DKPGMHVGVVGLGGLGHVAVKFAKAMGVKVTVISTSPSKKSEAIERLGA---------------------DSFLVSRDQD  239 (361)
Q Consensus       181 ~~~g~~vlV~Gag~vG~~a~~la~~~g~~vi~~~~~~~~~~~~~~~~g~---------------------~~vv~~~~~~  239 (361)
                      .+++.+||.+|+|. |..+..+++. |++|+.++-++...+.+.++.+.                     +.-+...+..
T Consensus        66 ~~~~~~vLD~GCG~-G~~~~~La~~-G~~V~gvD~S~~~i~~a~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~~~D~~  143 (252)
T 2gb4_A           66 GQSGLRVFFPLCGK-AIEMKWFADR-GHTVVGVEISEIGIREFFAEQNLSYTEEPLAEIAGAKVFKSSSGSISLYCCSIF  143 (252)
T ss_dssp             TCCSCEEEETTCTT-CTHHHHHHHT-TCEEEEECSCHHHHHHHHHHTTCCEEEEECTTSTTCEEEEETTSSEEEEESCTT
T ss_pred             CCCCCeEEEeCCCC-cHHHHHHHHC-CCeEEEEECCHHHHHHHHHhcccccccccccccccccccccCCCceEEEECccc
Confidence            36788999999864 7777777765 89999999998877666444431                     1111111111


Q ss_pred             HHHHh-cCCccEEEEcCCC--------cccHHHHHhccccCCEEEEe
Q 018067          240 EMQAA-MGTMDGIIDTVSA--------VHPLMPLIGLLKSQGKLVLV  277 (361)
Q Consensus       240 ~~~~~-~~g~d~vid~~g~--------~~~~~~~~~~l~~~G~~v~~  277 (361)
                      .+... .+.||+|++...-        ...+..+.+.|+|||+++++
T Consensus       144 ~l~~~~~~~FD~V~~~~~l~~l~~~~~~~~l~~~~~~LkpGG~l~l~  190 (252)
T 2gb4_A          144 DLPRANIGKFDRIWDRGALVAINPGDHDRYADIILSLLRKEFQYLVA  190 (252)
T ss_dssp             TGGGGCCCCEEEEEESSSTTTSCGGGHHHHHHHHHHTEEEEEEEEEE
T ss_pred             cCCcccCCCEEEEEEhhhhhhCCHHHHHHHHHHHHHHcCCCeEEEEE
Confidence            11111 1579999975321        11355678899999998654

>3rc1_A Sugar 3-ketoreductase; sugar biosynthesis, TDP binding, NADP binding binding protein; HET: TLO NAP; 1.71A {Actinomadura kijaniata} PDB: 3rbv_A* 3rc2_A* 3rcb_A* 3rc7_A* 3rc9_A*

Probab=96.13  E-value=0.071  Score=48.54  Aligned_cols=129  Identities=19%  Similarity=0.179  Sum_probs=77.3

Q ss_pred             CEEEEEcCChHHH-HHHHHHHHc-CCeEEEE-eCCchhHHHHHHHcCCCEEecCCCHHHHHHhc-CCccEEEEcCCCccc
Q 018067          185 MHVGVVGLGGLGH-VAVKFAKAM-GVKVTVI-STSPSKKSEAIERLGADSFLVSRDQDEMQAAM-GTMDGIIDTVSAVHP  260 (361)
Q Consensus       185 ~~vlV~Gag~vG~-~a~~la~~~-g~~vi~~-~~~~~~~~~~~~~~g~~~vv~~~~~~~~~~~~-~g~d~vid~~g~~~~  260 (361)
                      -+|.|+|+|.+|. ..+..++.. +++++.+ +++.++.+.+++++|+...   .+.+.  -+. ..+|+|+.++....-
T Consensus        28 ~rigiIG~G~~g~~~~~~~l~~~~~~~l~av~d~~~~~~~~~a~~~g~~~~---~~~~~--ll~~~~~D~V~i~tp~~~h  102 (350)
T 3rc1_A           28 IRVGVIGCADIAWRRALPALEAEPLTEVTAIASRRWDRAKRFTERFGGEPV---EGYPA--LLERDDVDAVYVPLPAVLH  102 (350)
T ss_dssp             EEEEEESCCHHHHHTHHHHHHHCTTEEEEEEEESSHHHHHHHHHHHCSEEE---ESHHH--HHTCTTCSEEEECCCGGGH
T ss_pred             eEEEEEcCcHHHHHHHHHHHHhCCCeEEEEEEcCCHHHHHHHHHHcCCCCc---CCHHH--HhcCCCCCEEEECCCcHHH
Confidence            4689999999998 566666665 7787744 5666677777788887543   22221  222 369999999987654


Q ss_pred             HHHHHhccccCCEEEEecCCCCCcccChHH------H-HhCCcE-EEecccCCHHHHHHHHHHHHcCCCc
Q 018067          261 LMPLIGLLKSQGKLVLVGAPEKPLELPAFS------L-LMGRKI-VGGSMIGGMKETQEMIDFAAKHNIR  322 (361)
Q Consensus       261 ~~~~~~~l~~~G~~v~~g~~~~~~~~~~~~------~-~~~~~~-i~g~~~~~~~~~~~~~~ll~~~~~~  322 (361)
                      ...+..+++.| +-|++.-   ++..+..+      . -.+++. ..+........++.+.+++.+|.+-
T Consensus       103 ~~~~~~al~aG-k~Vl~EK---P~a~~~~ea~~l~~~a~~~g~~~~v~~~~R~~p~~~~~k~~i~~G~iG  168 (350)
T 3rc1_A          103 AEWIDRALRAG-KHVLAEK---PLTTDRPQAERLFAVARERGLLLMENFMFLHHPQHRQVADMLDEGVIG  168 (350)
T ss_dssp             HHHHHHHHHTT-CEEEEES---SSCSSHHHHHHHHHHHHHTTCCEEEECGGGGCTHHHHHHHHHHTTTTC
T ss_pred             HHHHHHHHHCC-CcEEEeC---CCCCCHHHHHHHHHHHHHhCCEEEEEecccCCHHHHHHHHHHhcCCCC
Confidence            66667776655 4455643   23223221      1 123333 3333333334566677777777664

>1kpg_A CFA synthase;, cyclopropane-fatty-acyl-phospholipid synthase 1; mixed alpha beta fold, structural genomics, PSI; HET: SAH 16A; 2.00A {Mycobacterium tuberculosis} SCOP: c.66.1.18 PDB: 1kp9_A* 1kph_A* 1tpy_A* 1l1e_A*

Probab=96.12  E-value=0.02  Score=50.35  Aligned_cols=97  Identities=16%  Similarity=0.137  Sum_probs=65.2

Q ss_pred             cCCCCCCCEEEEEcCChHHHHHHHHHHHcCCeEEEEeCCchhHHHHHHHc---CC--CEEecCCCHHHHHHhcCCccEEE
Q 018067          178 YGLDKPGMHVGVVGLGGLGHVAVKFAKAMGVKVTVISTSPSKKSEAIERL---GA--DSFLVSRDQDEMQAAMGTMDGII  252 (361)
Q Consensus       178 ~~~~~~g~~vlV~Gag~vG~~a~~la~~~g~~vi~~~~~~~~~~~~~~~~---g~--~~vv~~~~~~~~~~~~~g~d~vi  252 (361)
                      ...++++.+||-+|+|. |..+..+++..|++|+.++.+++....+.+.+   |.  ...+...+..   .+.+.+|+|+
T Consensus        59 ~~~~~~~~~vLDiGcG~-G~~~~~l~~~~~~~v~gvd~s~~~~~~a~~~~~~~~~~~~~~~~~~d~~---~~~~~fD~v~  134 (287)
T 1kpg_A           59 KLGLQPGMTLLDVGCGW-GATMMRAVEKYDVNVVGLTLSKNQANHVQQLVANSENLRSKRVLLAGWE---QFDEPVDRIV  134 (287)
T ss_dssp             TTTCCTTCEEEEETCTT-SHHHHHHHHHHCCEEEEEESCHHHHHHHHHHHHTCCCCSCEEEEESCGG---GCCCCCSEEE
T ss_pred             HcCCCCcCEEEEECCcc-cHHHHHHHHHcCCEEEEEECCHHHHHHHHHHHHhcCCCCCeEEEECChh---hCCCCeeEEE
Confidence            34468899999999876 77888888778999999999887665553332   32  1111122211   2236799998


Q ss_pred             Ec-----CCC---cccHHHHHhccccCCEEEEec
Q 018067          253 DT-----VSA---VHPLMPLIGLLKSQGKLVLVG  278 (361)
Q Consensus       253 d~-----~g~---~~~~~~~~~~l~~~G~~v~~g  278 (361)
                      ..     .+.   ...+..+.+.|+|+|+++...
T Consensus       135 ~~~~l~~~~~~~~~~~l~~~~~~LkpgG~l~~~~  168 (287)
T 1kpg_A          135 SIGAFEHFGHERYDAFFSLAHRLLPADGVMLLHT  168 (287)
T ss_dssp             EESCGGGTCTTTHHHHHHHHHHHSCTTCEEEEEE
T ss_pred             EeCchhhcChHHHHHHHHHHHHhcCCCCEEEEEE
Confidence            65     221   234677888999999998764

>3gvx_A Glycerate dehydrogenase related protein; NYSGXRC, PSI-II, 11143J, structural genomics, protein structure initiative; 2.20A {Thermoplasma acidophilum}

Probab=96.12  E-value=0.007  Score=53.69  Aligned_cols=85  Identities=20%  Similarity=0.294  Sum_probs=61.3

Q ss_pred             CCCEEEEEcCChHHHHHHHHHHHcCCeEEEEeCCchhHHHHHHHcCCCEEecCCCHHHHHHhcCCccEEEEcCCCc-c--
Q 018067          183 PGMHVGVVGLGGLGHVAVKFAKAMGVKVTVISTSPSKKSEAIERLGADSFLVSRDQDEMQAAMGTMDGIIDTVSAV-H--  259 (361)
Q Consensus       183 ~g~~vlV~Gag~vG~~a~~la~~~g~~vi~~~~~~~~~~~~~~~~g~~~vv~~~~~~~~~~~~~g~d~vid~~g~~-~--  259 (361)
                      .|++|.|+|.|.+|...++.++.+|.+|++.+++.+....      .. .  ..+   +.++....|+|+-++... .  
T Consensus       121 ~g~tvGIIGlG~IG~~vA~~l~~~G~~V~~~dr~~~~~~~------~~-~--~~~---l~ell~~aDiV~l~~P~t~~t~  188 (290)
T 3gvx_A          121 YGKALGILGYGGIGRRVAHLAKAFGMRVIAYTRSSVDQNV------DV-I--SES---PADLFRQSDFVLIAIPLTDKTR  188 (290)
T ss_dssp             TTCEEEEECCSHHHHHHHHHHHHHTCEEEEECSSCCCTTC------SE-E--CSS---HHHHHHHCSEEEECCCCCTTTT
T ss_pred             ecchheeeccCchhHHHHHHHHhhCcEEEEEecccccccc------cc-c--cCC---hHHHhhccCeEEEEeeccccch
Confidence            5789999999999999999999999999999887654211      11 1  111   223334589998887742 1  


Q ss_pred             --cHHHHHhccccCCEEEEecC
Q 018067          260 --PLMPLIGLLKSQGKLVLVGA  279 (361)
Q Consensus       260 --~~~~~~~~l~~~G~~v~~g~  279 (361)
                        .-...+..++++..++.++.
T Consensus       189 ~li~~~~l~~mk~gailIN~aR  210 (290)
T 3gvx_A          189 GMVNSRLLANARKNLTIVNVAR  210 (290)
T ss_dssp             TCBSHHHHTTCCTTCEEEECSC
T ss_pred             hhhhHHHHhhhhcCceEEEeeh
Confidence              12467788899999999875

>3ezl_A Acetoacetyl-COA reductase; ssgcid, acetyacetyl-COA reductase, oxidoreductase, structural genomics; HET: P4C; 2.25A {Burkholderia pseudomallei 1710B} SCOP: c.2.1.0

Probab=96.11  E-value=0.01  Score=51.42  Aligned_cols=76  Identities=20%  Similarity=0.240  Sum_probs=50.6

Q ss_pred             CCCCEEEEEcC-ChHHHHHHHHHHHcCCeEEEEe-CCchhHHHHH---HHcCCCE---EecCCCHHHHHHh-------cC
Q 018067          182 KPGMHVGVVGL-GGLGHVAVKFAKAMGVKVTVIS-TSPSKKSEAI---ERLGADS---FLVSRDQDEMQAA-------MG  246 (361)
Q Consensus       182 ~~g~~vlV~Ga-g~vG~~a~~la~~~g~~vi~~~-~~~~~~~~~~---~~~g~~~---vv~~~~~~~~~~~-------~~  246 (361)
                      .++++|||.|+ |++|..++..+...|++|++++ ++.++.....   +..+.+.   ..|-.+.+.+..+       .+
T Consensus        11 ~~~k~vlITGas~giG~~ia~~l~~~G~~v~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~Dv~~~~~v~~~~~~~~~~~g   90 (256)
T 3ezl_A           11 MSQRIAYVTGGMGGIGTSICQRLHKDGFRVVAGCGPNSPRRVKWLEDQKALGFDFYASEGNVGDWDSTKQAFDKVKAEVG   90 (256)
T ss_dssp             --CEEEEETTTTSHHHHHHHHHHHHTTEEEEEEECTTCSSHHHHHHHHHHTTCCCEEEECCTTCHHHHHHHHHHHHHHTC
T ss_pred             CCCCEEEEECCCChHHHHHHHHHHHCCCEEEEEeCCCHHHHHHHHHHHHhcCCeeEEEecCCCCHHHHHHHHHHHHHhcC
Confidence            57888999987 9999999999999999999887 4444433332   2334321   2344554433322       24


Q ss_pred             CccEEEEcCCC
Q 018067          247 TMDGIIDTVSA  257 (361)
Q Consensus       247 g~d~vid~~g~  257 (361)
                      ++|++|+++|.
T Consensus        91 ~id~lv~~Ag~  101 (256)
T 3ezl_A           91 EIDVLVNNAGI  101 (256)
T ss_dssp             CEEEEEECCCC
T ss_pred             CCCEEEECCCC
Confidence            79999999984

>3euw_A MYO-inositol dehydrogenase; protein structure initiative II (PSI II), NYSGXRC, MYO-inosi dehydrogenase, oxidoreductase, tetramer; 2.30A {Corynebacterium glutamicum}

Probab=96.09  E-value=0.043  Score=49.79  Aligned_cols=129  Identities=16%  Similarity=0.143  Sum_probs=79.8

Q ss_pred             EEEEEcCChHHHHHHHHHHHc-CCeEEE-EeCCchhHHHHHHHcCCCEEecCCCHHHHHHhc--CCccEEEEcCCCcccH
Q 018067          186 HVGVVGLGGLGHVAVKFAKAM-GVKVTV-ISTSPSKKSEAIERLGADSFLVSRDQDEMQAAM--GTMDGIIDTVSAVHPL  261 (361)
Q Consensus       186 ~vlV~Gag~vG~~a~~la~~~-g~~vi~-~~~~~~~~~~~~~~~g~~~vv~~~~~~~~~~~~--~g~d~vid~~g~~~~~  261 (361)
                      +|.|+|+|.+|...+..++.. +++++. .+++.++...+++++|+. .+  .+   ..++.  ..+|+|+.++....-.
T Consensus         6 rvgiiG~G~~g~~~~~~l~~~~~~~l~av~d~~~~~~~~~a~~~g~~-~~--~~---~~~~l~~~~~D~V~i~tp~~~h~   79 (344)
T 3euw_A            6 RIALFGAGRIGHVHAANIAANPDLELVVIADPFIEGAQRLAEANGAE-AV--AS---PDEVFARDDIDGIVIGSPTSTHV   79 (344)
T ss_dssp             EEEEECCSHHHHHHHHHHHHCTTEEEEEEECSSHHHHHHHHHTTTCE-EE--SS---HHHHTTCSCCCEEEECSCGGGHH
T ss_pred             EEEEECCcHHHHHHHHHHHhCCCcEEEEEECCCHHHHHHHHHHcCCc-ee--CC---HHHHhcCCCCCEEEEeCCchhhH
Confidence            689999999999888887776 677774 455566666777778843 22  22   22332  3799999999887646


Q ss_pred             HHHHhccccCCEEEEecCCCCCcccChHH------HH-hCCc-EEEecccCCHHHHHHHHHHHHcCCCcee
Q 018067          262 MPLIGLLKSQGKLVLVGAPEKPLELPAFS------LL-MGRK-IVGGSMIGGMKETQEMIDFAAKHNIRAD  324 (361)
Q Consensus       262 ~~~~~~l~~~G~~v~~g~~~~~~~~~~~~------~~-~~~~-~i~g~~~~~~~~~~~~~~ll~~~~~~~~  324 (361)
                      ..+..+++.+ +-+++..   +...+..+      .. .+++ -..+........++.+.+++.+|.+-..
T Consensus        80 ~~~~~al~~g-k~v~~EK---P~~~~~~~~~~l~~~a~~~g~~~~v~~~~r~~p~~~~~k~~i~~g~iG~i  146 (344)
T 3euw_A           80 DLITRAVERG-IPALCEK---PIDLDIEMVRACKEKIGDGASKVMLGFNRRFDPSFAAINARVANQEIGNL  146 (344)
T ss_dssp             HHHHHHHHTT-CCEEECS---CSCSCHHHHHHHHHHHGGGGGGEEECCGGGGCHHHHHHHHHHHTTTTSSE
T ss_pred             HHHHHHHHcC-CcEEEEC---CCCCCHHHHHHHHHHHHhcCCeEEecchhhcCHHHHHHHHHHhcCCCCce
Confidence            6666666655 4455543   22222221      11 1223 3344444444567788888888877543

>1npy_A Hypothetical shikimate 5-dehydrogenase-like protein HI0607; structural genomics, PSI, protein structure initiative; 1.75A {Haemophilus influenzae} SCOP: c.2.1.7 c.58.1.5

Probab=96.09  E-value=0.034  Score=48.73  Aligned_cols=97  Identities=15%  Similarity=0.098  Sum_probs=67.7

Q ss_pred             HhhhcCCCCCCCEEEEEcCChHHHHHHHHHHHcCC-eEEEEeCCchhHHHHHHHcCCCEEecCCCHHHHHHhcCCccEEE
Q 018067          174 PLRFYGLDKPGMHVGVVGLGGLGHVAVKFAKAMGV-KVTVISTSPSKKSEAIERLGADSFLVSRDQDEMQAAMGTMDGII  252 (361)
Q Consensus       174 ~l~~~~~~~~g~~vlV~Gag~vG~~a~~la~~~g~-~vi~~~~~~~~~~~~~~~~g~~~vv~~~~~~~~~~~~~g~d~vi  252 (361)
                      ++.+.+ +..+.+++|+|+|+.|.+++..+...|+ +|+++.|+.++.+.++++++.. . ....     . ...+|+||
T Consensus       110 ~l~~~~-~~~~~~vlvlGaGgaarav~~~L~~~G~~~i~v~nRt~~ka~~la~~~~~~-~-~~~~-----~-~~~~DivI  180 (271)
T 1npy_A          110 LIEKYH-LNKNAKVIVHGSGGMAKAVVAAFKNSGFEKLKIYARNVKTGQYLAALYGYA-Y-INSL-----E-NQQADILV  180 (271)
T ss_dssp             HHHHTT-CCTTSCEEEECSSTTHHHHHHHHHHTTCCCEEEECSCHHHHHHHHHHHTCE-E-ESCC-----T-TCCCSEEE
T ss_pred             HHHHhC-CCCCCEEEEECCcHHHHHHHHHHHHCCCCEEEEEeCCHHHHHHHHHHcCCc-c-chhh-----h-cccCCEEE
Confidence            344433 3467889999999999999999999998 8999999988888888888752 1 1111     0 24699999


Q ss_pred             EcCCCcccH-------HHHHhccccCCEEEEecC
Q 018067          253 DTVSAVHPL-------MPLIGLLKSQGKLVLVGA  279 (361)
Q Consensus       253 d~~g~~~~~-------~~~~~~l~~~G~~v~~g~  279 (361)
                      ++++.....       ......++++..++++-.
T Consensus       181 naTp~gm~~~~~~~~~~~~~~~l~~~~~v~DlvY  214 (271)
T 1npy_A          181 NVTSIGMKGGKEEMDLAFPKAFIDNASVAFDVVA  214 (271)
T ss_dssp             ECSSTTCTTSTTTTSCSSCHHHHHHCSEEEECCC
T ss_pred             ECCCCCccCccccCCCCCCHHHcCCCCEEEEeec
Confidence            998864311       111245566777777755

>1vl0_A DTDP-4-dehydrorhamnose reductase, RFBD ortholog; structural joint center for structural genomics, JCSG, protein structu initiative; HET: NAI UNL; 2.05A {Clostridium acetobutylicum} SCOP: c.2.1.2

Probab=96.08  E-value=0.0099  Score=52.45  Aligned_cols=62  Identities=18%  Similarity=0.180  Sum_probs=47.0

Q ss_pred             CCCCEEEEEcC-ChHHHHHHHHHHHcCCeEEEEeCCchhHHHHHHHcCCCEEecCCCHHHHHHhcC--CccEEEEcCCCc
Q 018067          182 KPGMHVGVVGL-GGLGHVAVKFAKAMGVKVTVISTSPSKKSEAIERLGADSFLVSRDQDEMQAAMG--TMDGIIDTVSAV  258 (361)
Q Consensus       182 ~~g~~vlV~Ga-g~vG~~a~~la~~~g~~vi~~~~~~~~~~~~~~~~g~~~vv~~~~~~~~~~~~~--g~d~vid~~g~~  258 (361)
                      .+..+|||+|+ |.+|...+..+...|.+|+++++..               .|..+.+.+.++..  ++|+||++++..
T Consensus        10 ~~~~~vlVtGatG~iG~~l~~~L~~~g~~V~~~~r~~---------------~Dl~d~~~~~~~~~~~~~d~vih~A~~~   74 (292)
T 1vl0_A           10 HHHMKILITGANGQLGREIQKQLKGKNVEVIPTDVQD---------------LDITNVLAVNKFFNEKKPNVVINCAAHT   74 (292)
T ss_dssp             --CEEEEEESTTSHHHHHHHHHHTTSSEEEEEECTTT---------------CCTTCHHHHHHHHHHHCCSEEEECCCCC
T ss_pred             cccceEEEECCCChHHHHHHHHHHhCCCeEEeccCcc---------------CCCCCHHHHHHHHHhcCCCEEEECCccC
Confidence            56788999998 9999999999998999999988751               24445555555443  799999999853

>2avd_A Catechol-O-methyltransferase; structural genomics, structural genomics consortium, SGC; HET: SAM; 1.70A {Homo sapiens} SCOP: c.66.1.1

Probab=96.08  E-value=0.016  Score=49.18  Aligned_cols=98  Identities=14%  Similarity=0.101  Sum_probs=65.5

Q ss_pred             CCCCCEEEEEcCChHHHHHHHHHHHc--CCeEEEEeCCchhHHHHHHH---cCC--C-EEecCCCHHHHHHhc-----CC
Q 018067          181 DKPGMHVGVVGLGGLGHVAVKFAKAM--GVKVTVISTSPSKKSEAIER---LGA--D-SFLVSRDQDEMQAAM-----GT  247 (361)
Q Consensus       181 ~~~g~~vlV~Gag~vG~~a~~la~~~--g~~vi~~~~~~~~~~~~~~~---~g~--~-~vv~~~~~~~~~~~~-----~g  247 (361)
                      ..++++||-+|+| .|..++.+++..  +.+++.++.+++....+.+.   .|.  . .++..+..+.+..+.     +.
T Consensus        67 ~~~~~~vLdiG~G-~G~~~~~la~~~~~~~~v~~vD~~~~~~~~a~~~~~~~g~~~~i~~~~~d~~~~~~~~~~~~~~~~  145 (229)
T 2avd_A           67 LIQAKKALDLGTF-TGYSALALALALPADGRVVTCEVDAQPPELGRPLWRQAEAEHKIDLRLKPALETLDELLAAGEAGT  145 (229)
T ss_dssp             HTTCCEEEEECCT-TSHHHHHHHTTSCTTCEEEEEESCSHHHHHHHHHHHHTTCTTTEEEEESCHHHHHHHHHHTTCTTC
T ss_pred             hcCCCEEEEEcCC-ccHHHHHHHHhCCCCCEEEEEECCHHHHHHHHHHHHHCCCCCeEEEEEcCHHHHHHHHHhcCCCCC
Confidence            4577899999988 688889999876  56999999888765444332   343  1 222222223333332     57


Q ss_pred             ccEEEEcCCCc---ccHHHHHhccccCCEEEEecC
Q 018067          248 MDGIIDTVSAV---HPLMPLIGLLKSQGKLVLVGA  279 (361)
Q Consensus       248 ~d~vid~~g~~---~~~~~~~~~l~~~G~~v~~g~  279 (361)
                      +|+||-.....   ..+..+.+.|+++|.++....
T Consensus       146 ~D~v~~d~~~~~~~~~l~~~~~~L~pgG~lv~~~~  180 (229)
T 2avd_A          146 FDVAVVDADKENCSAYYERCLQLLRPGGILAVLRV  180 (229)
T ss_dssp             EEEEEECSCSTTHHHHHHHHHHHEEEEEEEEEECC
T ss_pred             ccEEEECCCHHHHHHHHHHHHHHcCCCeEEEEECC
Confidence            99987654432   347788899999999988643

>3un1_A Probable oxidoreductase; structural genomics, PSI-biology, NEW YORK structural genomi research consortium, nysgrc; 2.45A {Sinorhizobium meliloti}

Probab=96.07  E-value=0.0079  Score=52.45  Aligned_cols=71  Identities=14%  Similarity=0.177  Sum_probs=50.7

Q ss_pred             CCCEEEEEcC-ChHHHHHHHHHHHcCCeEEEEeCCchhHHHHHHHcCCC-EEecCCCHHHHHHh-------cCCccEEEE
Q 018067          183 PGMHVGVVGL-GGLGHVAVKFAKAMGVKVTVISTSPSKKSEAIERLGAD-SFLVSRDQDEMQAA-------MGTMDGIID  253 (361)
Q Consensus       183 ~g~~vlV~Ga-g~vG~~a~~la~~~g~~vi~~~~~~~~~~~~~~~~g~~-~vv~~~~~~~~~~~-------~~g~d~vid  253 (361)
                      .++++||.|+ |++|.+++..+...|++|++++++.++...    ..+. ...|-.+++.+.++       .+++|++|+
T Consensus        27 ~~k~vlVTGas~gIG~aia~~l~~~G~~V~~~~r~~~~~~~----~~~~~~~~Dv~d~~~v~~~~~~~~~~~g~iD~lv~  102 (260)
T 3un1_A           27 QQKVVVITGASQGIGAGLVRAYRDRNYRVVATSRSIKPSAD----PDIHTVAGDISKPETADRIVREGIERFGRIDSLVN  102 (260)
T ss_dssp             TCCEEEESSCSSHHHHHHHHHHHHTTCEEEEEESSCCCCSS----TTEEEEESCTTSHHHHHHHHHHHHHHHSCCCEEEE
T ss_pred             CCCEEEEeCCCCHHHHHHHHHHHHCCCEEEEEeCChhhccc----CceEEEEccCCCHHHHHHHHHHHHHHCCCCCEEEE
Confidence            5688999987 999999999999999999999988654311    1111 12345555444433       248999999


Q ss_pred             cCCC
Q 018067          254 TVSA  257 (361)
Q Consensus       254 ~~g~  257 (361)
                      ++|.
T Consensus       103 nAg~  106 (260)
T 3un1_A          103 NAGV  106 (260)
T ss_dssp             CCCC
T ss_pred             CCCC
Confidence            9984

>3zu3_A Putative reductase YPO4104/Y4119/YP_4011; oxidoreductase, fatty acid biosynthesis II, short-chain dehydrogenase reductase superfamily; HET: NAI; 1.80A {Yersinia pestis} PDB: 3zu4_A* 3zu5_A* 3zu2_A*

Probab=96.06  E-value=0.045  Score=50.55  Aligned_cols=81  Identities=17%  Similarity=0.078  Sum_probs=53.9

Q ss_pred             hcCCC-CCCCEEEEEcC-ChHHHHHHHHHHH-cCCeEEEEeCCchh---------------HHHHHHHcCCCEE---ecC
Q 018067          177 FYGLD-KPGMHVGVVGL-GGLGHVAVKFAKA-MGVKVTVISTSPSK---------------KSEAIERLGADSF---LVS  235 (361)
Q Consensus       177 ~~~~~-~~g~~vlV~Ga-g~vG~~a~~la~~-~g~~vi~~~~~~~~---------------~~~~~~~~g~~~v---v~~  235 (361)
                      ..+.+ ..++++||.|+ +++|++++..+.. .|++|+++++..+.               ....++..|....   .|-
T Consensus        39 ~~~~~~~~gKvaLVTGas~GIG~AiA~~LA~g~GA~Vv~~~~~~~~~~~~~~~~gwyn~~~~~~~~~~~G~~a~~i~~Dv  118 (405)
T 3zu3_A           39 TEGPIANGPKRVLVIGASTGYGLAARITAAFGCGADTLGVFFERPGEEGKPGTSGWYNSAAFHKFAAQKGLYAKSINGDA  118 (405)
T ss_dssp             HHCCCTTCCSEEEEESCSSHHHHHHHHHHHHHHCCEEEEEECCCCCBTTBCCCHHHHHHHHHHHHHHHTTCCEEEEESCT
T ss_pred             hcCCcCCCCCEEEEeCcchHHHHHHHHHHHHhcCCEEEEEeCCchhhhhhcccccchhHHHHHHHHHhcCCceEEEECCC
Confidence            33444 56788889987 8999999988888 99999988765432               1223345565422   244


Q ss_pred             CCHHHHHH-------hcCCccEEEEcCCC
Q 018067          236 RDQDEMQA-------AMGTMDGIIDTVSA  257 (361)
Q Consensus       236 ~~~~~~~~-------~~~g~d~vid~~g~  257 (361)
                      .+++.+.+       ..+++|++++++|.
T Consensus       119 td~~~v~~~v~~i~~~~G~IDiLVNNAG~  147 (405)
T 3zu3_A          119 FSDEIKQLTIDAIKQDLGQVDQVIYSLAS  147 (405)
T ss_dssp             TSHHHHHHHHHHHHHHTSCEEEEEECCCC
T ss_pred             CCHHHHHHHHHHHHHHcCCCCEEEEcCcc
Confidence            45443332       23579999999886

>2yut_A Putative short-chain oxidoreductase; alpha and beta proteins (A/B), NAD(P)-binding rossmann-fold structural genomics, NPPSFA; HET: NAP; 2.20A {Thermus thermophilus}

Probab=96.05  E-value=0.0093  Score=49.66  Aligned_cols=70  Identities=24%  Similarity=0.332  Sum_probs=51.1

Q ss_pred             CEEEEEcC-ChHHHHHHHHHHHcCCeEEEEeCCchhHHHHHHHcCCCEE--ecCCCHHHHHHhc---CCccEEEEcCCC
Q 018067          185 MHVGVVGL-GGLGHVAVKFAKAMGVKVTVISTSPSKKSEAIERLGADSF--LVSRDQDEMQAAM---GTMDGIIDTVSA  257 (361)
Q Consensus       185 ~~vlV~Ga-g~vG~~a~~la~~~g~~vi~~~~~~~~~~~~~~~~g~~~v--v~~~~~~~~~~~~---~g~d~vid~~g~  257 (361)
                      +++||.|+ |.+|..+++.+...  +|++++++.++...+.++++. ..  .|..+++.+.++.   +++|++|+++|.
T Consensus         1 k~vlVtGasg~iG~~la~~l~~~--~V~~~~r~~~~~~~~~~~~~~-~~~~~D~~~~~~~~~~~~~~~~id~vi~~ag~   76 (207)
T 2yut_A            1 MRVLITGATGGLGGAFARALKGH--DLLLSGRRAGALAELAREVGA-RALPADLADELEAKALLEEAGPLDLLVHAVGK   76 (207)
T ss_dssp             CEEEEETTTSHHHHHHHHHTTTS--EEEEECSCHHHHHHHHHHHTC-EECCCCTTSHHHHHHHHHHHCSEEEEEECCCC
T ss_pred             CEEEEEcCCcHHHHHHHHHHHhC--CEEEEECCHHHHHHHHHhccC-cEEEeeCCCHHHHHHHHHhcCCCCEEEECCCc
Confidence            36899997 99999888877666  999999988777666555543 22  2445555555443   389999999985

>3hdj_A Probable ornithine cyclodeaminase; APC62486, bordetella pertussis TOH structural genomics, PSI-2, protein structure initiative; 1.70A {Bordetella pertussis}

Probab=96.04  E-value=0.1  Score=46.69  Aligned_cols=107  Identities=17%  Similarity=0.192  Sum_probs=69.7

Q ss_pred             hhcCCCCCCCEEEEEcCChHHHHHHHHHHH-cCC-eEEEEeCCchhHHHHHHH----cCCCEEecCCCHHHHHHhcCCcc
Q 018067          176 RFYGLDKPGMHVGVVGLGGLGHVAVKFAKA-MGV-KVTVISTSPSKKSEAIER----LGADSFLVSRDQDEMQAAMGTMD  249 (361)
Q Consensus       176 ~~~~~~~~g~~vlV~Gag~vG~~a~~la~~-~g~-~vi~~~~~~~~~~~~~~~----~g~~~vv~~~~~~~~~~~~~g~d  249 (361)
                      +..++ +..++++|+|+|.+|...+..+.. .+. +|.+.+++  +.+.++++    +|......  +.   .+...++|
T Consensus       114 ~~La~-~~~~~v~iIGaG~~a~~~~~al~~~~~~~~V~v~~r~--~a~~la~~l~~~~g~~~~~~--~~---~eav~~aD  185 (313)
T 3hdj_A          114 GALAR-PRSSVLGLFGAGTQGAEHAAQLSARFALEAILVHDPY--ASPEILERIGRRCGVPARMA--AP---ADIAAQAD  185 (313)
T ss_dssp             HHHSC-TTCCEEEEECCSHHHHHHHHHHHHHSCCCEEEEECTT--CCHHHHHHHHHHHTSCEEEC--CH---HHHHHHCS
T ss_pred             Hhhcc-CCCcEEEEECccHHHHHHHHHHHHhCCCcEEEEECCc--HHHHHHHHHHHhcCCeEEEe--CH---HHHHhhCC
Confidence            34443 567889999999999988887765 455 78888887  44444443    46543222  32   22334699


Q ss_pred             EEEEcCCCcccHHHHHhccccCCEEEEecCCCC-CcccChHHH
Q 018067          250 GIIDTVSAVHPLMPLIGLLKSQGKLVLVGAPEK-PLELPAFSL  291 (361)
Q Consensus       250 ~vid~~g~~~~~~~~~~~l~~~G~~v~~g~~~~-~~~~~~~~~  291 (361)
                      +|+.|+.....+- ....++++-.++.+|.... ..+++...+
T Consensus       186 IVi~aT~s~~pvl-~~~~l~~G~~V~~vGs~~p~~~El~~~~~  227 (313)
T 3hdj_A          186 IVVTATRSTTPLF-AGQALRAGAFVGAIGSSLPHTRELDDEAL  227 (313)
T ss_dssp             EEEECCCCSSCSS-CGGGCCTTCEEEECCCSSTTCCCCCHHHH
T ss_pred             EEEEccCCCCccc-CHHHcCCCcEEEECCCCCCchhhcCHHHH
Confidence            9999988754221 1457899999999998643 345555443

>1rkx_A CDP-glucose-4,6-dehydratase; SDR, lyase; HET: NAD; 1.80A {Yersinia pseudotuberculosis} SCOP: c.2.1.2 PDB: 1wvg_A*

Probab=96.04  E-value=0.012  Score=53.48  Aligned_cols=74  Identities=20%  Similarity=0.217  Sum_probs=53.0

Q ss_pred             CCEEEEEcC-ChHHHHHHHHHHHcCCeEEEEeCCchhHHHHHHHc----CCC-EEecCCCHHHHHHhcC--CccEEEEcC
Q 018067          184 GMHVGVVGL-GGLGHVAVKFAKAMGVKVTVISTSPSKKSEAIERL----GAD-SFLVSRDQDEMQAAMG--TMDGIIDTV  255 (361)
Q Consensus       184 g~~vlV~Ga-g~vG~~a~~la~~~g~~vi~~~~~~~~~~~~~~~~----g~~-~vv~~~~~~~~~~~~~--g~d~vid~~  255 (361)
                      +.+|||.|+ |.+|...++.+...|.+|++++++.++...+.+.+    +.. ...|..+++.+.++..  ++|+||+++
T Consensus         9 ~~~vlVtGatG~iG~~l~~~L~~~g~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~Dl~d~~~~~~~~~~~~~d~vih~A   88 (357)
T 1rkx_A            9 GKRVFVTGHTGFKGGWLSLWLQTMGATVKGYSLTAPTVPSLFETARVADGMQSEIGDIRDQNKLLESIREFQPEIVFHMA   88 (357)
T ss_dssp             TCEEEEETTTSHHHHHHHHHHHHTTCEEEEEESSCSSSSCHHHHTTTTTTSEEEECCTTCHHHHHHHHHHHCCSEEEECC
T ss_pred             CCEEEEECCCchHHHHHHHHHHhCCCeEEEEeCCCcccchhhHhhccCCceEEEEccccCHHHHHHHHHhcCCCEEEECC
Confidence            578999997 99999999999999999999998765543332222    222 1235556665555544  589999999


Q ss_pred             CC
Q 018067          256 SA  257 (361)
Q Consensus       256 g~  257 (361)
                      +.
T Consensus        89 ~~   90 (357)
T 1rkx_A           89 AQ   90 (357)
T ss_dssp             SC
T ss_pred             CC
Confidence            84

>2bll_A Protein YFBG; decarboxylase, short chain dehydrogenase, L-ARA4N biosynthes methyltransferase, transferase; 2.3A {Escherichia coli} SCOP: c.2.1.2 PDB: 1u9j_A 1z73_A 1z75_A 1z7b_A 1z74_A

Probab=96.03  E-value=0.013  Score=52.82  Aligned_cols=72  Identities=11%  Similarity=0.021  Sum_probs=49.5

Q ss_pred             EEEEEcC-ChHHHHHHHHHHHc-CCeEEEEeCCchhHHHHHHHcCCCEE-ecCCC-HHHHHHhcCCccEEEEcCCC
Q 018067          186 HVGVVGL-GGLGHVAVKFAKAM-GVKVTVISTSPSKKSEAIERLGADSF-LVSRD-QDEMQAAMGTMDGIIDTVSA  257 (361)
Q Consensus       186 ~vlV~Ga-g~vG~~a~~la~~~-g~~vi~~~~~~~~~~~~~~~~g~~~v-v~~~~-~~~~~~~~~g~d~vid~~g~  257 (361)
                      +|||+|+ |.+|..+++.+... |.+|++++++.++...+.+..+...+ .|..+ .+.+.++..++|+||++++.
T Consensus         2 ~vlVtGatG~iG~~l~~~L~~~~g~~V~~~~r~~~~~~~~~~~~~~~~~~~D~~~~~~~~~~~~~~~d~vih~A~~   77 (345)
T 2bll_A            2 RVLILGVNGFIGNHLTERLLREDHYEVYGLDIGSDAISRFLNHPHFHFVEGDISIHSEWIEYHVKKCDVVLPLVAI   77 (345)
T ss_dssp             EEEEETCSSHHHHHHHHHHHHSTTCEEEEEESCCGGGGGGTTCTTEEEEECCTTTCSHHHHHHHHHCSEEEECBCC
T ss_pred             eEEEECCCcHHHHHHHHHHHHhCCCEEEEEeCCcchHHHhhcCCCeEEEeccccCcHHHHHhhccCCCEEEEcccc
Confidence            6899998 99999999999887 89999999987654332111122211 23333 34455555589999999874

>3tfw_A Putative O-methyltransferase; PSI-biology, nysgrc, structural genomics, NEW YORK structura genomics research consortium; 1.88A {Klebsiella pneumoniae subsp}

Probab=96.02  E-value=0.012  Score=50.99  Aligned_cols=98  Identities=13%  Similarity=0.087  Sum_probs=64.7

Q ss_pred             CCCCCEEEEEcCChHHHHHHHHHHHc--CCeEEEEeCCchhHHHHHH---HcCCC--EEecCCC-HHHHHHhcC--CccE
Q 018067          181 DKPGMHVGVVGLGGLGHVAVKFAKAM--GVKVTVISTSPSKKSEAIE---RLGAD--SFLVSRD-QDEMQAAMG--TMDG  250 (361)
Q Consensus       181 ~~~g~~vlV~Gag~vG~~a~~la~~~--g~~vi~~~~~~~~~~~~~~---~~g~~--~vv~~~~-~~~~~~~~~--g~d~  250 (361)
                      ..++.+||-+|+|. |..++.+++.+  +.+|+.++.+++....+.+   +.|..  ..+...+ .+.+....+  .+|+
T Consensus        61 ~~~~~~VLdiG~G~-G~~~~~la~~~~~~~~v~~vD~s~~~~~~a~~~~~~~g~~~~v~~~~~d~~~~l~~~~~~~~fD~  139 (248)
T 3tfw_A           61 LTQAKRILEIGTLG-GYSTIWMARELPADGQLLTLEADAHHAQVARENLQLAGVDQRVTLREGPALQSLESLGECPAFDL  139 (248)
T ss_dssp             HHTCSEEEEECCTT-SHHHHHHHTTSCTTCEEEEEECCHHHHHHHHHHHHHTTCTTTEEEEESCHHHHHHTCCSCCCCSE
T ss_pred             hcCCCEEEEecCCc-hHHHHHHHHhCCCCCEEEEEECCHHHHHHHHHHHHHcCCCCcEEEEEcCHHHHHHhcCCCCCeEE
Confidence            45788999999875 88888899887  5699999998876554433   23542  1122223 233444433  7999


Q ss_pred             EEEcCCC---cccHHHHHhccccCCEEEEecC
Q 018067          251 IIDTVSA---VHPLMPLIGLLKSQGKLVLVGA  279 (361)
Q Consensus       251 vid~~g~---~~~~~~~~~~l~~~G~~v~~g~  279 (361)
                      ||-....   ...+..+.+.|++||.++.-..
T Consensus       140 V~~d~~~~~~~~~l~~~~~~LkpGG~lv~~~~  171 (248)
T 3tfw_A          140 IFIDADKPNNPHYLRWALRYSRPGTLIIGDNV  171 (248)
T ss_dssp             EEECSCGGGHHHHHHHHHHTCCTTCEEEEECC
T ss_pred             EEECCchHHHHHHHHHHHHhcCCCeEEEEeCC
Confidence            9843332   2346778899999998887644

>4iiu_A 3-oxoacyl-[acyl-carrier protein] reductase; structural genomics, center for structural genomics of infec diseases, csgid; HET: NAP; 2.10A {Escherichia coli} PDB: 4iiv_A*

Probab=95.99  E-value=0.016  Score=50.60  Aligned_cols=75  Identities=16%  Similarity=0.290  Sum_probs=50.7

Q ss_pred             CCCEEEEEcC-ChHHHHHHHHHHHcCCeEEEEe-CCchhHHHHHHHc---CCCE---EecCCCHHHHHHh-------cCC
Q 018067          183 PGMHVGVVGL-GGLGHVAVKFAKAMGVKVTVIS-TSPSKKSEAIERL---GADS---FLVSRDQDEMQAA-------MGT  247 (361)
Q Consensus       183 ~g~~vlV~Ga-g~vG~~a~~la~~~g~~vi~~~-~~~~~~~~~~~~~---g~~~---vv~~~~~~~~~~~-------~~g  247 (361)
                      .++++||.|+ |++|..+++.+...|++|+++. ++.++.....+++   +...   ..|..+++.+.++       .++
T Consensus        25 ~~k~vlVTGas~gIG~~la~~l~~~G~~v~i~~~r~~~~~~~~~~~l~~~~~~~~~~~~Dl~~~~~~~~~~~~~~~~~g~  104 (267)
T 4iiu_A           25 MSRSVLVTGASKGIGRAIARQLAADGFNIGVHYHRDAAGAQETLNAIVANGGNGRLLSFDVANREQCREVLEHEIAQHGA  104 (267)
T ss_dssp             CCCEEEETTTTSHHHHHHHHHHHHTTCEEEEEESSCHHHHHHHHHHHHHTTCCEEEEECCTTCHHHHHHHHHHHHHHHCC
T ss_pred             CCCEEEEECCCChHHHHHHHHHHHCCCEEEEEeCCchHHHHHHHHHHHhcCCceEEEEecCCCHHHHHHHHHHHHHHhCC
Confidence            4678999987 9999999999999999997755 4444444433332   3321   2355555443332       248


Q ss_pred             ccEEEEcCCC
Q 018067          248 MDGIIDTVSA  257 (361)
Q Consensus       248 ~d~vid~~g~  257 (361)
                      +|++|+++|.
T Consensus       105 id~li~nAg~  114 (267)
T 4iiu_A          105 WYGVVSNAGI  114 (267)
T ss_dssp             CSEEEECCCC
T ss_pred             ccEEEECCCC
Confidence            9999999985

>1dl5_A Protein-L-isoaspartate O-methyltransferase; isoaspartyl residues, protein repair, deamidation, post-translational modification; HET: SAH; 1.80A {Thermotoga maritima} SCOP: c.66.1.7 d.197.1.1

Probab=95.99  E-value=0.024  Score=50.92  Aligned_cols=100  Identities=22%  Similarity=0.173  Sum_probs=66.9

Q ss_pred             cCCCCCCCEEEEEcCChHHHHHHHHHHHcC--CeEEEEeCCchhHHHHHHH---cCCCE-EecCCCHHHHHHhcCCccEE
Q 018067          178 YGLDKPGMHVGVVGLGGLGHVAVKFAKAMG--VKVTVISTSPSKKSEAIER---LGADS-FLVSRDQDEMQAAMGTMDGI  251 (361)
Q Consensus       178 ~~~~~~g~~vlV~Gag~vG~~a~~la~~~g--~~vi~~~~~~~~~~~~~~~---~g~~~-vv~~~~~~~~~~~~~g~d~v  251 (361)
                      ...++++++||-+|+|. |..++.+++..+  .+|+.++.+++....+.+.   .|... .+...+........+.+|+|
T Consensus        70 ~l~~~~~~~VLDiGcG~-G~~~~~la~~~~~~~~v~gvD~s~~~~~~a~~~~~~~g~~~v~~~~~d~~~~~~~~~~fD~I  148 (317)
T 1dl5_A           70 WVGLDKGMRVLEIGGGT-GYNAAVMSRVVGEKGLVVSVEYSRKICEIAKRNVERLGIENVIFVCGDGYYGVPEFSPYDVI  148 (317)
T ss_dssp             HTTCCTTCEEEEECCTT-SHHHHHHHHHHCTTCEEEEEESCHHHHHHHHHHHHHTTCCSEEEEESCGGGCCGGGCCEEEE
T ss_pred             hcCCCCcCEEEEecCCc-hHHHHHHHHhcCCCCEEEEEECCHHHHHHHHHHHHHcCCCCeEEEECChhhccccCCCeEEE
Confidence            34478999999999876 888888888753  4699999988765544332   34321 11112211101123579999


Q ss_pred             EEcCCCcccHHHHHhccccCCEEEEec
Q 018067          252 IDTVSAVHPLMPLIGLLKSQGKLVLVG  278 (361)
Q Consensus       252 id~~g~~~~~~~~~~~l~~~G~~v~~g  278 (361)
                      +....-.+....+.+.|+++|+++..-
T Consensus       149 v~~~~~~~~~~~~~~~LkpgG~lvi~~  175 (317)
T 1dl5_A          149 FVTVGVDEVPETWFTQLKEGGRVIVPI  175 (317)
T ss_dssp             EECSBBSCCCHHHHHHEEEEEEEEEEB
T ss_pred             EEcCCHHHHHHHHHHhcCCCcEEEEEE
Confidence            987766665678889999999988763

>4e12_A Diketoreductase; oxidoreductase, NADH; HET: 1PE; 1.93A {Acinetobacter baylyi} PDB: 4dyd_A* 4e13_A*

Probab=95.98  E-value=0.039  Score=48.65  Aligned_cols=90  Identities=23%  Similarity=0.234  Sum_probs=58.9

Q ss_pred             CEEEEEcCChHHHHHHHHHHHcCCeEEEEeCCchhHHHHHHHc------------CCCE---------EecCCCHHHHHH
Q 018067          185 MHVGVVGLGGLGHVAVKFAKAMGVKVTVISTSPSKKSEAIERL------------GADS---------FLVSRDQDEMQA  243 (361)
Q Consensus       185 ~~vlV~Gag~vG~~a~~la~~~g~~vi~~~~~~~~~~~~~~~~------------g~~~---------vv~~~~~~~~~~  243 (361)
                      ++|.|+|+|.+|...++.+...|.+|++.++++++.+.+.+.+            +.+.         +...   ....+
T Consensus         5 ~kV~VIGaG~mG~~iA~~la~~G~~V~l~d~~~~~~~~~~~~i~~~~~~~~~~g~~~~~~~~~~~~~~i~~~---~~~~~   81 (283)
T 4e12_A            5 TNVTVLGTGVLGSQIAFQTAFHGFAVTAYDINTDALDAAKKRFEGLAAVYEKEVAGAADGAAQKALGGIRYS---DDLAQ   81 (283)
T ss_dssp             CEEEEECCSHHHHHHHHHHHHTTCEEEEECSSHHHHHHHHHHHHHHHHHHHHHSTTCTTTHHHHHHHHCEEE---SCHHH
T ss_pred             CEEEEECCCHHHHHHHHHHHhCCCeEEEEeCCHHHHHHHHHHHHHHHHHHHHhcccCCHHHHHHHHcCeEEe---CCHHH
Confidence            5799999999999999999999999999999988766654431            2110         0000   11223


Q ss_pred             hcCCccEEEEcCCCc--c---cHHHHHhccccCCEEEEe
Q 018067          244 AMGTMDGIIDTVSAV--H---PLMPLIGLLKSQGKLVLV  277 (361)
Q Consensus       244 ~~~g~d~vid~~g~~--~---~~~~~~~~l~~~G~~v~~  277 (361)
                      ...++|+||+++...  .   .+......++++..++..
T Consensus        82 ~~~~aDlVi~av~~~~~~~~~v~~~l~~~~~~~~il~s~  120 (283)
T 4e12_A           82 AVKDADLVIEAVPESLDLKRDIYTKLGELAPAKTIFATN  120 (283)
T ss_dssp             HTTTCSEEEECCCSCHHHHHHHHHHHHHHSCTTCEEEEC
T ss_pred             HhccCCEEEEeccCcHHHHHHHHHHHHhhCCCCcEEEEC
Confidence            345799999999875  1   123334445565555544

>3i6i_A Putative leucoanthocyanidin reductase 1; rossmann fold, short chain dehydrogenase reductase, flavonoi oxidoreductase; HET: NDP; 1.75A {Vitis vinifera} PDB: 3i5m_A 3i52_A* 3i6q_A*

Probab=95.97  E-value=0.025  Score=51.31  Aligned_cols=93  Identities=18%  Similarity=0.236  Sum_probs=62.8

Q ss_pred             CCEEEEEcC-ChHHHHHHHHHHHcCCeEEEEeCCc----hhHHHHH--HHcCCCE-EecCCCHHHHHHhcC--CccEEEE
Q 018067          184 GMHVGVVGL-GGLGHVAVKFAKAMGVKVTVISTSP----SKKSEAI--ERLGADS-FLVSRDQDEMQAAMG--TMDGIID  253 (361)
Q Consensus       184 g~~vlV~Ga-g~vG~~a~~la~~~g~~vi~~~~~~----~~~~~~~--~~~g~~~-vv~~~~~~~~~~~~~--g~d~vid  253 (361)
                      ..+|||+|+ |.+|..++..+...|.+|++++++.    ++...+.  +..++.. ..|..+.+.+.++..  ++|+||.
T Consensus        10 ~~~IlVtGatG~iG~~l~~~L~~~g~~V~~l~R~~~~~~~~~~~~~~l~~~~v~~~~~Dl~d~~~l~~~~~~~~~d~Vi~   89 (346)
T 3i6i_A           10 KGRVLIAGATGFIGQFVATASLDAHRPTYILARPGPRSPSKAKIFKALEDKGAIIVYGLINEQEAMEKILKEHEIDIVVS   89 (346)
T ss_dssp             -CCEEEECTTSHHHHHHHHHHHHTTCCEEEEECSSCCCHHHHHHHHHHHHTTCEEEECCTTCHHHHHHHHHHTTCCEEEE
T ss_pred             CCeEEEECCCcHHHHHHHHHHHHCCCCEEEEECCCCCChhHHHHHHHHHhCCcEEEEeecCCHHHHHHHHhhCCCCEEEE
Confidence            357999998 9999999999999999999999976    3332221  2335543 235666777776666  9999999


Q ss_pred             cCCCcc--cHHHHHhccccCC---EEEE
Q 018067          254 TVSAVH--PLMPLIGLLKSQG---KLVL  276 (361)
Q Consensus       254 ~~g~~~--~~~~~~~~l~~~G---~~v~  276 (361)
                      +++...  .....++.++..|   +++.
T Consensus        90 ~a~~~n~~~~~~l~~aa~~~g~v~~~v~  117 (346)
T 3i6i_A           90 TVGGESILDQIALVKAMKAVGTIKRFLP  117 (346)
T ss_dssp             CCCGGGGGGHHHHHHHHHHHCCCSEEEC
T ss_pred             CCchhhHHHHHHHHHHHHHcCCceEEee
Confidence            998632  2334555554444   5653

>3mti_A RRNA methylase; SAM-dependent, PSI, MCSG, structural genomics, midwest cente structural genomics, protein structure initiative; 1.95A {Streptococcus thermophilus} PDB: 3lby_A*

Probab=95.97  E-value=0.014  Score=47.73  Aligned_cols=97  Identities=12%  Similarity=0.182  Sum_probs=63.7

Q ss_pred             CCCCCCEEEEEcCChHHHHHHHHHHHcCCeEEEEeCCchhHHHHHH---HcCCC--EEecCCCHHHHHHh-cCCccEEEE
Q 018067          180 LDKPGMHVGVVGLGGLGHVAVKFAKAMGVKVTVISTSPSKKSEAIE---RLGAD--SFLVSRDQDEMQAA-MGTMDGIID  253 (361)
Q Consensus       180 ~~~~g~~vlV~Gag~vG~~a~~la~~~g~~vi~~~~~~~~~~~~~~---~~g~~--~vv~~~~~~~~~~~-~~g~d~vid  253 (361)
                      .++++++||=+|+|. |..+..+++. +.+|+.++.+++....+.+   +.|.+  .++. .+...+... .+.+|+|+-
T Consensus        19 ~~~~~~~vLDiGcG~-G~~~~~la~~-~~~v~~vD~s~~~l~~a~~~~~~~~~~~v~~~~-~~~~~l~~~~~~~fD~v~~   95 (185)
T 3mti_A           19 VLDDESIVVDATMGN-GNDTAFLAGL-SKKVYAFDVQEQALGKTSQRLSDLGIENTELIL-DGHENLDHYVREPIRAAIF   95 (185)
T ss_dssp             TCCTTCEEEESCCTT-SHHHHHHHTT-SSEEEEEESCHHHHHHHHHHHHHHTCCCEEEEE-SCGGGGGGTCCSCEEEEEE
T ss_pred             hCCCCCEEEEEcCCC-CHHHHHHHHh-CCEEEEEECCHHHHHHHHHHHHHcCCCcEEEEe-CcHHHHHhhccCCcCEEEE
Confidence            368899999999875 7788888877 8899999999876554433   23432  2222 232222222 346999976


Q ss_pred             cCCCc---------------ccHHHHHhccccCCEEEEecC
Q 018067          254 TVSAV---------------HPLMPLIGLLKSQGKLVLVGA  279 (361)
Q Consensus       254 ~~g~~---------------~~~~~~~~~l~~~G~~v~~g~  279 (361)
                      ..+.-               ..+..+.+.|+++|+++.+..
T Consensus        96 ~~~~~~~~~~~~~~~~~~~~~~l~~~~~~LkpgG~l~i~~~  136 (185)
T 3mti_A           96 NLGYLPSADKSVITKPHTTLEAIEKILDRLEVGGRLAIMIY  136 (185)
T ss_dssp             EEC-----------CHHHHHHHHHHHHHHEEEEEEEEEEEC
T ss_pred             eCCCCCCcchhcccChhhHHHHHHHHHHhcCCCcEEEEEEe
Confidence            53321               124677889999999988754

>2q1w_A Putative nucleotide sugar epimerase/ dehydratase; rossman fold, protein-NAD complex, sugar binding protein; HET: NAD; 2.19A {Bordetella bronchiseptica}

Probab=95.96  E-value=0.0075  Score=54.49  Aligned_cols=76  Identities=17%  Similarity=0.199  Sum_probs=51.8

Q ss_pred             CCCEEEEEcC-ChHHHHHHHHHHHcCCeEEEEeCCchhHHHHHHHc-CCC-EEecCCCHHHHHHhcCC--ccEEEEcCCC
Q 018067          183 PGMHVGVVGL-GGLGHVAVKFAKAMGVKVTVISTSPSKKSEAIERL-GAD-SFLVSRDQDEMQAAMGT--MDGIIDTVSA  257 (361)
Q Consensus       183 ~g~~vlV~Ga-g~vG~~a~~la~~~g~~vi~~~~~~~~~~~~~~~~-g~~-~vv~~~~~~~~~~~~~g--~d~vid~~g~  257 (361)
                      .+.+|||+|+ |.+|..++..+...|.+|+++++.........+.+ +.. ...|..+.+.+.++..+  +|+||+++|.
T Consensus        20 ~~~~vlVTGatG~iG~~l~~~L~~~g~~V~~~~r~~~~~~~~l~~~~~~~~~~~Dl~d~~~~~~~~~~~~~D~vih~A~~   99 (333)
T 2q1w_A           20 HMKKVFITGICGQIGSHIAELLLERGDKVVGIDNFATGRREHLKDHPNLTFVEGSIADHALVNQLIGDLQPDAVVHTAAS   99 (333)
T ss_dssp             -CCEEEEETTTSHHHHHHHHHHHHTTCEEEEEECCSSCCGGGSCCCTTEEEEECCTTCHHHHHHHHHHHCCSEEEECCCC
T ss_pred             CCCEEEEeCCccHHHHHHHHHHHHCCCEEEEEECCCccchhhHhhcCCceEEEEeCCCHHHHHHHHhccCCcEEEECcee
Confidence            4578999997 99999999999889999999998754321111111 121 12355566666655544  9999999985


Q ss_pred             c
Q 018067          258 V  258 (361)
Q Consensus       258 ~  258 (361)
                      .
T Consensus       100 ~  100 (333)
T 2q1w_A          100 Y  100 (333)
T ss_dssp             C
T ss_pred             c
Confidence            3

>3e18_A Oxidoreductase; dehydrogenase, NAD-binding, structural genom protein structure initiative, PSI, NEW YORK structural GENO research consortium; HET: NAD; 1.95A {Listeria innocua}

Probab=95.94  E-value=0.073  Score=48.66  Aligned_cols=132  Identities=17%  Similarity=0.157  Sum_probs=80.0

Q ss_pred             CEEEEEcCChHHHHHHHHHHHc-CCeEEEEeCCchhHHHHHHHcCCCEEecCCCHHHHHHhcCCccEEEEcCCCcccHHH
Q 018067          185 MHVGVVGLGGLGHVAVKFAKAM-GVKVTVISTSPSKKSEAIERLGADSFLVSRDQDEMQAAMGTMDGIIDTVSAVHPLMP  263 (361)
Q Consensus       185 ~~vlV~Gag~vG~~a~~la~~~-g~~vi~~~~~~~~~~~~~~~~g~~~vv~~~~~~~~~~~~~g~d~vid~~g~~~~~~~  263 (361)
                      -+|.|+|+|.+|...+..++.. +++++.+.+....+.+.++++|+..   +.+.+.+.. ...+|+|+.|+....-...
T Consensus         6 ~~vgiiG~G~~g~~~~~~l~~~~~~~l~av~d~~~~~~~~a~~~g~~~---~~~~~~ll~-~~~~D~V~i~tp~~~h~~~   81 (359)
T 3e18_A            6 YQLVIVGYGGMGSYHVTLASAADNLEVHGVFDILAEKREAAAQKGLKI---YESYEAVLA-DEKVDAVLIATPNDSHKEL   81 (359)
T ss_dssp             EEEEEECCSHHHHHHHHHHHTSTTEEEEEEECSSHHHHHHHHTTTCCB---CSCHHHHHH-CTTCCEEEECSCGGGHHHH
T ss_pred             CcEEEECcCHHHHHHHHHHHhCCCcEEEEEEcCCHHHHHHHHhcCCce---eCCHHHHhc-CCCCCEEEEcCCcHHHHHH
Confidence            3689999999999888888776 6788777655544445556777632   334332211 2479999999987654666


Q ss_pred             HHhccccCCEEEEecCCCCCcccChHH---H---H-hCCcE-EEecccCCHHHHHHHHHHHHcCCCcee
Q 018067          264 LIGLLKSQGKLVLVGAPEKPLELPAFS---L---L-MGRKI-VGGSMIGGMKETQEMIDFAAKHNIRAD  324 (361)
Q Consensus       264 ~~~~l~~~G~~v~~g~~~~~~~~~~~~---~---~-~~~~~-i~g~~~~~~~~~~~~~~ll~~~~~~~~  324 (361)
                      +..+++.| +-|++.-   ++..+..+   +   . .+++. ..+........++.+.+++++|.+-..
T Consensus        82 ~~~al~aG-khVl~EK---P~a~~~~ea~~l~~~a~~~g~~~~v~~~~r~~p~~~~~k~~i~~g~iG~i  146 (359)
T 3e18_A           82 AISALEAG-KHVVCEK---PVTMTSEDLLAIMDVAKRVNKHFMVHQNRRWDEDFLIIKEMFEQKTIGEM  146 (359)
T ss_dssp             HHHHHHTT-CEEEEES---SCCSSHHHHHHHHHHHHHHTCCEEEECGGGGCHHHHHHHHHHHHTTTSSE
T ss_pred             HHHHHHCC-CCEEeeC---CCcCCHHHHHHHHHHHHHhCCeEEEEeeeccCHHHHHHHHHHHcCCCCCe
Confidence            77777755 5555533   33333221   1   1 12232 344444334557777788888776543

>3ggo_A Prephenate dehydrogenase; TYRA, HPP, NADH, alpha-beta, oxidoreductase; HET: NAI ENO; 2.15A {Aquifex aeolicus} PDB: 3ggg_D* 3ggp_A*

Probab=95.91  E-value=0.076  Score=47.61  Aligned_cols=90  Identities=20%  Similarity=0.105  Sum_probs=64.1

Q ss_pred             CEEEEEcCChHHHHHHHHHHHcCC--eEEEEeCCchhHHHHHHHcCCC-EEecCCCHHHHHH-hcCCccEEEEcCCCccc
Q 018067          185 MHVGVVGLGGLGHVAVKFAKAMGV--KVTVISTSPSKKSEAIERLGAD-SFLVSRDQDEMQA-AMGTMDGIIDTVSAVHP  260 (361)
Q Consensus       185 ~~vlV~Gag~vG~~a~~la~~~g~--~vi~~~~~~~~~~~~~~~~g~~-~vv~~~~~~~~~~-~~~g~d~vid~~g~~~~  260 (361)
                      .+|.|+|.|.+|...+..++..|.  +|++.++++++.+.+ .+.|.. ..... .    .+ ....+|+||.++.....
T Consensus        34 ~kI~IIG~G~mG~slA~~l~~~G~~~~V~~~dr~~~~~~~a-~~~G~~~~~~~~-~----~~~~~~~aDvVilavp~~~~  107 (314)
T 3ggo_A           34 QNVLIVGVGFMGGSFAKSLRRSGFKGKIYGYDINPESISKA-VDLGIIDEGTTS-I----AKVEDFSPDFVMLSSPVRTF  107 (314)
T ss_dssp             SEEEEESCSHHHHHHHHHHHHTTCCSEEEEECSCHHHHHHH-HHTTSCSEEESC-T----TGGGGGCCSEEEECSCGGGH
T ss_pred             CEEEEEeeCHHHHHHHHHHHhCCCCCEEEEEECCHHHHHHH-HHCCCcchhcCC-H----HHHhhccCCEEEEeCCHHHH
Confidence            679999999999999999999998  999999988776665 567753 22221 1    12 34578999999887541


Q ss_pred             ---HHHHHhccccCCEEEEecCC
Q 018067          261 ---LMPLIGLLKSQGKLVLVGAP  280 (361)
Q Consensus       261 ---~~~~~~~l~~~G~~v~~g~~  280 (361)
                         +......++++..++.++..
T Consensus       108 ~~vl~~l~~~l~~~~iv~d~~Sv  130 (314)
T 3ggo_A          108 REIAKKLSYILSEDATVTDQGSV  130 (314)
T ss_dssp             HHHHHHHHHHSCTTCEEEECCSC
T ss_pred             HHHHHHHhhccCCCcEEEECCCC
Confidence               22334456677777777654

>2g5c_A Prephenate dehydrogenase; TYRA, oxidoreductase; HET: NAD; 1.90A {Aquifex aeolicus} SCOP: a.100.1.12 c.2.1.6

Probab=95.88  E-value=0.042  Score=48.29  Aligned_cols=88  Identities=19%  Similarity=0.139  Sum_probs=60.8

Q ss_pred             EEEEEcCChHHHHHHHHHHHcCC--eEEEEeCCchhHHHHHHHcCCCE-EecCCCHHHHHHhcC-CccEEEEcCCCcccH
Q 018067          186 HVGVVGLGGLGHVAVKFAKAMGV--KVTVISTSPSKKSEAIERLGADS-FLVSRDQDEMQAAMG-TMDGIIDTVSAVHPL  261 (361)
Q Consensus       186 ~vlV~Gag~vG~~a~~la~~~g~--~vi~~~~~~~~~~~~~~~~g~~~-vv~~~~~~~~~~~~~-g~d~vid~~g~~~~~  261 (361)
                      +|.|+|+|.+|.+.++.+...|.  +|++.++++++.+.+ ++.|... ..  .+.   .+... .+|+||.++......
T Consensus         3 ~I~iIG~G~mG~~~a~~l~~~g~~~~V~~~d~~~~~~~~~-~~~g~~~~~~--~~~---~~~~~~~aDvVilavp~~~~~   76 (281)
T 2g5c_A            3 NVLIVGVGFMGGSFAKSLRRSGFKGKIYGYDINPESISKA-VDLGIIDEGT--TSI---AKVEDFSPDFVMLSSPVRTFR   76 (281)
T ss_dssp             EEEEESCSHHHHHHHHHHHHTTCCSEEEEECSCHHHHHHH-HHTTSCSEEE--SCG---GGGGGTCCSEEEECSCHHHHH
T ss_pred             EEEEEecCHHHHHHHHHHHhcCCCcEEEEEeCCHHHHHHH-HHCCCccccc--CCH---HHHhcCCCCEEEEcCCHHHHH
Confidence            68999999999999999999887  899998888776655 5677641 21  111   12334 789999999875422


Q ss_pred             ---HHHHhccccCCEEEEecC
Q 018067          262 ---MPLIGLLKSQGKLVLVGA  279 (361)
Q Consensus       262 ---~~~~~~l~~~G~~v~~g~  279 (361)
                         ......++++..++.++.
T Consensus        77 ~v~~~l~~~l~~~~iv~~~~~   97 (281)
T 2g5c_A           77 EIAKKLSYILSEDATVTDQGS   97 (281)
T ss_dssp             HHHHHHHHHSCTTCEEEECCS
T ss_pred             HHHHHHHhhCCCCcEEEECCC
Confidence               223334667776776654

>2c5a_A GDP-mannose-3', 5'-epimerase; short chain dehydratase/reductase, GDP-gulose, GDP-galactose, keto intermediate, vitamin C, SDR; HET: GDC NAD BTB; 1.4A {Arabidopsis thaliana} SCOP: c.2.1.2 PDB: 2c59_A* 2c54_A* 2c5e_A*

Probab=95.88  E-value=0.016  Score=53.47  Aligned_cols=74  Identities=9%  Similarity=0.121  Sum_probs=54.3

Q ss_pred             CCCEEEEEcC-ChHHHHHHHHHHHcCCeEEEEeCCchhHHHHHHHcCCCE-EecCCCHHHHHHhcCCccEEEEcCCC
Q 018067          183 PGMHVGVVGL-GGLGHVAVKFAKAMGVKVTVISTSPSKKSEAIERLGADS-FLVSRDQDEMQAAMGTMDGIIDTVSA  257 (361)
Q Consensus       183 ~g~~vlV~Ga-g~vG~~a~~la~~~g~~vi~~~~~~~~~~~~~~~~g~~~-vv~~~~~~~~~~~~~g~d~vid~~g~  257 (361)
                      .+.+|||+|+ |.+|...++.+...|.+|+++++...+.... ...+... ..|..+.+.+.++..++|+||++++.
T Consensus        28 ~~~~vlVtGatG~iG~~l~~~L~~~g~~V~~~~r~~~~~~~~-~~~~v~~~~~Dl~d~~~~~~~~~~~d~Vih~A~~  103 (379)
T 2c5a_A           28 ENLKISITGAGGFIASHIARRLKHEGHYVIASDWKKNEHMTE-DMFCDEFHLVDLRVMENCLKVTEGVDHVFNLAAD  103 (379)
T ss_dssp             SCCEEEEETTTSHHHHHHHHHHHHTTCEEEEEESSCCSSSCG-GGTCSEEEECCTTSHHHHHHHHTTCSEEEECCCC
T ss_pred             cCCeEEEECCccHHHHHHHHHHHHCCCeEEEEECCCccchhh-ccCCceEEECCCCCHHHHHHHhCCCCEEEECcee
Confidence            3568999998 9999999999988999999999876543211 1113322 23556666677777799999999884

>3gdg_A Probable NADP-dependent mannitol dehydrogenase; rossmann fold, beta-alpha-beta motifs, open twisted sheet, A NADP, oxidoreductase; 2.30A {Cladosporium herbarum} SCOP: c.2.1.0 PDB: 3gdf_A

Probab=95.87  E-value=0.031  Score=48.65  Aligned_cols=76  Identities=22%  Similarity=0.284  Sum_probs=51.5

Q ss_pred             CCCCEEEEEcC---ChHHHHHHHHHHHcCCeEEEEeCCchhH-----HHHHHHcCCCE---EecCCCHHHHHHh------
Q 018067          182 KPGMHVGVVGL---GGLGHVAVKFAKAMGVKVTVISTSPSKK-----SEAIERLGADS---FLVSRDQDEMQAA------  244 (361)
Q Consensus       182 ~~g~~vlV~Ga---g~vG~~a~~la~~~g~~vi~~~~~~~~~-----~~~~~~~g~~~---vv~~~~~~~~~~~------  244 (361)
                      -.++++||.|+   +++|..+++.+...|++|++++++.++.     .++.+..+...   ..|..+.+.+..+      
T Consensus        18 l~~k~vlITGas~~~giG~~~a~~l~~~G~~v~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~Dl~~~~~v~~~~~~~~~   97 (267)
T 3gdg_A           18 LKGKVVVVTGASGPKGMGIEAARGCAEMGAAVAITYASRAQGAEENVKELEKTYGIKAKAYKCQVDSYESCEKLVKDVVA   97 (267)
T ss_dssp             CTTCEEEETTCCSSSSHHHHHHHHHHHTSCEEEECBSSSSSHHHHHHHHHHHHHCCCEECCBCCTTCHHHHHHHHHHHHH
T ss_pred             cCCCEEEEECCCCCCChHHHHHHHHHHCCCeEEEEeCCcchhHHHHHHHHHHhcCCceeEEecCCCCHHHHHHHHHHHHH
Confidence            35788999885   4899999999999999999998875433     23323345432   2244554433322      


Q ss_pred             -cCCccEEEEcCCC
Q 018067          245 -MGTMDGIIDTVSA  257 (361)
Q Consensus       245 -~~g~d~vid~~g~  257 (361)
                       .+++|++|+++|.
T Consensus        98 ~~g~id~li~nAg~  111 (267)
T 3gdg_A           98 DFGQIDAFIANAGA  111 (267)
T ss_dssp             HTSCCSEEEECCCC
T ss_pred             HcCCCCEEEECCCc
Confidence             2479999999984

>3pdu_A 3-hydroxyisobutyrate dehydrogenase family protein; gamma-hydroxybutyrate dehydrogenase, succinic semialdehyde R glyoxylate metabolism; HET: NAP; 1.89A {Geobacter sulfurreducens}

Probab=95.86  E-value=0.021  Score=50.53  Aligned_cols=87  Identities=18%  Similarity=0.209  Sum_probs=60.5

Q ss_pred             EEEEEcCChHHHHHHHHHHHcCCeEEEEeCCchhHHHHHHHcCCCEEecCCCHHHHHHhcCCccEEEEcCCCcccHHHHH
Q 018067          186 HVGVVGLGGLGHVAVKFAKAMGVKVTVISTSPSKKSEAIERLGADSFLVSRDQDEMQAAMGTMDGIIDTVSAVHPLMPLI  265 (361)
Q Consensus       186 ~vlV~Gag~vG~~a~~la~~~g~~vi~~~~~~~~~~~~~~~~g~~~vv~~~~~~~~~~~~~g~d~vid~~g~~~~~~~~~  265 (361)
                      +|.|+|.|.+|...+..+...|.+|++.++++++.+.+. +.|+..   ..+.   .+.....|+||-++..+..+...+
T Consensus         3 ~I~iiG~G~mG~~~a~~l~~~G~~V~~~dr~~~~~~~~~-~~g~~~---~~~~---~~~~~~advvi~~v~~~~~~~~v~   75 (287)
T 3pdu_A            3 TYGFLGLGIMGGPMAANLVRAGFDVTVWNRNPAKCAPLV-ALGARQ---ASSP---AEVCAACDITIAMLADPAAAREVC   75 (287)
T ss_dssp             CEEEECCSTTHHHHHHHHHHHTCCEEEECSSGGGGHHHH-HHTCEE---CSCH---HHHHHHCSEEEECCSSHHHHHHHH
T ss_pred             eEEEEccCHHHHHHHHHHHHCCCeEEEEcCCHHHHHHHH-HCCCee---cCCH---HHHHHcCCEEEEEcCCHHHHHHHH
Confidence            588999999999999988888999999999998877774 446532   1221   122234799999998763244444


Q ss_pred             -------hccccCCEEEEecC
Q 018067          266 -------GLLKSQGKLVLVGA  279 (361)
Q Consensus       266 -------~~l~~~G~~v~~g~  279 (361)
                             ..++++..++..+.
T Consensus        76 ~~~~~l~~~l~~g~~vv~~st   96 (287)
T 3pdu_A           76 FGANGVLEGIGGGRGYIDMST   96 (287)
T ss_dssp             HSTTCGGGTCCTTCEEEECSC
T ss_pred             cCchhhhhcccCCCEEEECCC
Confidence                   34456666666654

>3ezy_A Dehydrogenase; structural genomics, unknown function, PSI-2, protein structure initiative; 2.04A {Thermotoga maritima}

Probab=95.85  E-value=0.093  Score=47.58  Aligned_cols=132  Identities=19%  Similarity=0.241  Sum_probs=80.9

Q ss_pred             EEEEEcCChHHHHHHHHHHHc-CCeEEEE-eCCchhHHHHHHHcCCCEEecCCCHHHHHHhcCCccEEEEcCCCcccHHH
Q 018067          186 HVGVVGLGGLGHVAVKFAKAM-GVKVTVI-STSPSKKSEAIERLGADSFLVSRDQDEMQAAMGTMDGIIDTVSAVHPLMP  263 (361)
Q Consensus       186 ~vlV~Gag~vG~~a~~la~~~-g~~vi~~-~~~~~~~~~~~~~~g~~~vv~~~~~~~~~~~~~g~d~vid~~g~~~~~~~  263 (361)
                      +|.|+|+|.+|...+..++.. +++++.+ ++++++.+.+++++|...++  .+.+.+.. ...+|+|+.++....-...
T Consensus         4 rvgiIG~G~~g~~~~~~l~~~~~~~l~av~d~~~~~~~~~~~~~~~~~~~--~~~~~ll~-~~~~D~V~i~tp~~~h~~~   80 (344)
T 3ezy_A            4 RIGVIGLGRIGTIHAENLKMIDDAILYAISDVREDRLREMKEKLGVEKAY--KDPHELIE-DPNVDAVLVCSSTNTHSEL   80 (344)
T ss_dssp             EEEEECCSHHHHHHHHHGGGSTTEEEEEEECSCHHHHHHHHHHHTCSEEE--SSHHHHHH-CTTCCEEEECSCGGGHHHH
T ss_pred             EEEEEcCCHHHHHHHHHHHhCCCcEEEEEECCCHHHHHHHHHHhCCCcee--CCHHHHhc-CCCCCEEEEcCCCcchHHH
Confidence            588999999999877777664 6777754 55666667777888875443  23222111 2379999999988664566


Q ss_pred             HHhccccCCEEEEecCCCCCcccChHH------HH-hCC-cEEEecccCCHHHHHHHHHHHHcCCCcee
Q 018067          264 LIGLLKSQGKLVLVGAPEKPLELPAFS------LL-MGR-KIVGGSMIGGMKETQEMIDFAAKHNIRAD  324 (361)
Q Consensus       264 ~~~~l~~~G~~v~~g~~~~~~~~~~~~------~~-~~~-~~i~g~~~~~~~~~~~~~~ll~~~~~~~~  324 (361)
                      +..+++.| +-+.+..   ++..+..+      .. .++ .-..+........++.+.+++.+|.+-..
T Consensus        81 ~~~al~~g-k~v~~EK---P~~~~~~e~~~l~~~a~~~g~~~~v~~~~R~~p~~~~~k~~i~~G~iG~i  145 (344)
T 3ezy_A           81 VIACAKAK-KHVFCEK---PLSLNLADVDRMIEETKKADVILFTGFNRRFDRNFKKLKEAVENGTIGKP  145 (344)
T ss_dssp             HHHHHHTT-CEEEEES---CSCSCHHHHHHHHHHHHHHTCCEEEECGGGGCHHHHHHHHHHHTTTTSSE
T ss_pred             HHHHHhcC-CeEEEEC---CCCCCHHHHHHHHHHHHHhCCcEEEeecccCCHHHHHHHHHHHcCCCCCe
Confidence            66676665 4455543   22222221      11 122 33445444444567788888888877543

>2aef_A Calcium-gated potassium channel MTHK; rossmann fold, helix-turn-helix, Ca2+ binding, flexible interface; 1.70A {Methanothermobacterthermautotrophicus} PDB: 2aej_A 2aem_A 3rbx_A 2ogu_A 2fy8_A 3kxd_A

Probab=95.83  E-value=0.041  Score=46.90  Aligned_cols=94  Identities=11%  Similarity=0.097  Sum_probs=63.0

Q ss_pred             CCCCEEEEEcCChHHHHHHHHHHHcCCeEEEEeCCchhHHHHHHHcCCCEEe-cCCCHHHHHHh-cCCccEEEEcCCCcc
Q 018067          182 KPGMHVGVVGLGGLGHVAVKFAKAMGVKVTVISTSPSKKSEAIERLGADSFL-VSRDQDEMQAA-MGTMDGIIDTVSAVH  259 (361)
Q Consensus       182 ~~g~~vlV~Gag~vG~~a~~la~~~g~~vi~~~~~~~~~~~~~~~~g~~~vv-~~~~~~~~~~~-~~g~d~vid~~g~~~  259 (361)
                      ....+++|+|+|.+|...++.+...|. |+++++++++...+ + .|...+. |..+++.+.+. ..++|.+|-+++...
T Consensus         7 ~~~~~viI~G~G~~G~~la~~L~~~g~-v~vid~~~~~~~~~-~-~~~~~i~gd~~~~~~l~~a~i~~ad~vi~~~~~d~   83 (234)
T 2aef_A            7 AKSRHVVICGWSESTLECLRELRGSEV-FVLAEDENVRKKVL-R-SGANFVHGDPTRVSDLEKANVRGARAVIVDLESDS   83 (234)
T ss_dssp             ---CEEEEESCCHHHHHHHHHSTTSEE-EEEESCGGGHHHHH-H-TTCEEEESCTTCHHHHHHTTCTTCSEEEECCSCHH
T ss_pred             CCCCEEEEECCChHHHHHHHHHHhCCe-EEEEECCHHHHHHH-h-cCCeEEEcCCCCHHHHHhcCcchhcEEEEcCCCcH
Confidence            456789999999999999999998898 88888887766555 3 5654332 44556666655 468999999998754


Q ss_pred             cHH---HHHhccccCCEEEEec
Q 018067          260 PLM---PLIGLLKSQGKLVLVG  278 (361)
Q Consensus       260 ~~~---~~~~~l~~~G~~v~~g  278 (361)
                      .-.   ...+.+.+..+++.-.
T Consensus        84 ~n~~~~~~a~~~~~~~~iia~~  105 (234)
T 2aef_A           84 ETIHCILGIRKIDESVRIIAEA  105 (234)
T ss_dssp             HHHHHHHHHHHHCSSSEEEEEC
T ss_pred             HHHHHHHHHHHHCCCCeEEEEE
Confidence            111   2333344555666553

>3pp8_A Glyoxylate/hydroxypyruvate reductase A; structural genomics, center for structural genomics of infec diseases, csgid; 2.10A {Salmonella enterica subsp} PDB: 3kbo_A

Probab=95.82  E-value=0.014  Score=52.32  Aligned_cols=88  Identities=19%  Similarity=0.317  Sum_probs=61.2

Q ss_pred             CCCEEEEEcCChHHHHHHHHHHHcCCeEEEEeCCchhHHHHHHHcCCCEEecCCCHHHHHHhcCCccEEEEcCCCc----
Q 018067          183 PGMHVGVVGLGGLGHVAVKFAKAMGVKVTVISTSPSKKSEAIERLGADSFLVSRDQDEMQAAMGTMDGIIDTVSAV----  258 (361)
Q Consensus       183 ~g~~vlV~Gag~vG~~a~~la~~~g~~vi~~~~~~~~~~~~~~~~g~~~vv~~~~~~~~~~~~~g~d~vid~~g~~----  258 (361)
                      .|.+|.|+|.|.+|..+++.++.+|.+|++.+++.+...      ++....   ..+.+.++....|+|+-++...    
T Consensus       138 ~g~tvGIiG~G~IG~~vA~~l~~~G~~V~~~dr~~~~~~------~~~~~~---~~~~l~ell~~aDiV~l~~Plt~~t~  208 (315)
T 3pp8_A          138 EEFSVGIMGAGVLGAKVAESLQAWGFPLRCWSRSRKSWP------GVESYV---GREELRAFLNQTRVLINLLPNTAQTV  208 (315)
T ss_dssp             TTCCEEEECCSHHHHHHHHHHHTTTCCEEEEESSCCCCT------TCEEEE---SHHHHHHHHHTCSEEEECCCCCGGGT
T ss_pred             CCCEEEEEeeCHHHHHHHHHHHHCCCEEEEEcCCchhhh------hhhhhc---ccCCHHHHHhhCCEEEEecCCchhhh
Confidence            588999999999999999999999999999988765321      222111   1133444555788888776532    


Q ss_pred             ccH-HHHHhccccCCEEEEecC
Q 018067          259 HPL-MPLIGLLKSQGKLVLVGA  279 (361)
Q Consensus       259 ~~~-~~~~~~l~~~G~~v~~g~  279 (361)
                      ..+ ...+..++++..+|.++.
T Consensus       209 ~li~~~~l~~mk~gailIN~aR  230 (315)
T 3pp8_A          209 GIINSELLDQLPDGAYVLNLAR  230 (315)
T ss_dssp             TCBSHHHHTTSCTTEEEEECSC
T ss_pred             hhccHHHHhhCCCCCEEEECCC
Confidence            112 456677888888888764

>3d1l_A Putative NADP oxidoreductase BF3122; structural genomics, PSI-2, protein structure initiative, M center for structural genomics, MCSG; 2.19A {Bacteroides fragilis}

Probab=95.82  E-value=0.018  Score=50.22  Aligned_cols=87  Identities=16%  Similarity=0.156  Sum_probs=60.8

Q ss_pred             CEEEEEcCChHHHHHHHHHHHcCCe-EEEEeCCchhHHHHHHHcCCCEEecCCCHHHHHHhcCCccEEEEcCCCcccHHH
Q 018067          185 MHVGVVGLGGLGHVAVKFAKAMGVK-VTVISTSPSKKSEAIERLGADSFLVSRDQDEMQAAMGTMDGIIDTVSAVHPLMP  263 (361)
Q Consensus       185 ~~vlV~Gag~vG~~a~~la~~~g~~-vi~~~~~~~~~~~~~~~~g~~~vv~~~~~~~~~~~~~g~d~vid~~g~~~~~~~  263 (361)
                      -+|.|+|+|.+|...++.+...|.+ |.+.++++++.+.+.+.+|....   .+.   .+....+|+||.++.... ...
T Consensus        11 m~i~iiG~G~mG~~~a~~l~~~g~~~v~~~~~~~~~~~~~~~~~g~~~~---~~~---~~~~~~~Dvvi~av~~~~-~~~   83 (266)
T 3d1l_A           11 TPIVLIGAGNLATNLAKALYRKGFRIVQVYSRTEESARELAQKVEAEYT---TDL---AEVNPYAKLYIVSLKDSA-FAE   83 (266)
T ss_dssp             CCEEEECCSHHHHHHHHHHHHHTCCEEEEECSSHHHHHHHHHHTTCEEE---SCG---GGSCSCCSEEEECCCHHH-HHH
T ss_pred             CeEEEEcCCHHHHHHHHHHHHCCCeEEEEEeCCHHHHHHHHHHcCCcee---CCH---HHHhcCCCEEEEecCHHH-HHH
Confidence            4699999999999999888888987 88888888887777666675422   111   123347899999998764 344


Q ss_pred             HHh----ccccCCEEEEec
Q 018067          264 LIG----LLKSQGKLVLVG  278 (361)
Q Consensus       264 ~~~----~l~~~G~~v~~g  278 (361)
                      .++    .++++..++.+.
T Consensus        84 v~~~l~~~~~~~~ivv~~s  102 (266)
T 3d1l_A           84 LLQGIVEGKREEALMVHTA  102 (266)
T ss_dssp             HHHHHHTTCCTTCEEEECC
T ss_pred             HHHHHHhhcCCCcEEEECC
Confidence            433    334555666664

>2c29_D Dihydroflavonol 4-reductase; flavonoids, short dehydrogenase reductase, NADPH, dihydroquercetin, rossmann fold, oxidoreductase; HET: NAP DQH; 1.81A {Vitis vinifera} PDB: 2iod_A* 2nnl_D* 3bxx_A* 3c1t_A*

Probab=95.82  E-value=0.022  Score=51.35  Aligned_cols=75  Identities=17%  Similarity=0.152  Sum_probs=50.4

Q ss_pred             CCCEEEEEcC-ChHHHHHHHHHHHcCCeEEEEeCCchhHHHHH--HHcC-----CCE-EecCCCHHHHHHhcCCccEEEE
Q 018067          183 PGMHVGVVGL-GGLGHVAVKFAKAMGVKVTVISTSPSKKSEAI--ERLG-----ADS-FLVSRDQDEMQAAMGTMDGIID  253 (361)
Q Consensus       183 ~g~~vlV~Ga-g~vG~~a~~la~~~g~~vi~~~~~~~~~~~~~--~~~g-----~~~-vv~~~~~~~~~~~~~g~d~vid  253 (361)
                      .+++|||.|+ |.+|...+..+...|.+|++++++.+....+.  ..+.     ... ..|..+.+.+.++..++|+||+
T Consensus         4 ~~~~vlVTGatGfIG~~l~~~L~~~G~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~~Dl~d~~~~~~~~~~~d~Vih   83 (337)
T 2c29_D            4 QSETVCVTGASGFIGSWLVMRLLERGYTVRATVRDPTNVKKVKHLLDLPKAETHLTLWKADLADEGSFDEAIKGCTGVFH   83 (337)
T ss_dssp             --CEEEETTTTSHHHHHHHHHHHHTTCEEEEEESCTTCHHHHHHHHTSTTHHHHEEEEECCTTSTTTTHHHHTTCSEEEE
T ss_pred             CCCEEEEECCchHHHHHHHHHHHHCCCEEEEEECCcchhHHHHHHHhcccCCCeEEEEEcCCCCHHHHHHHHcCCCEEEE
Confidence            4678999997 99999999999889999998888765322221  1121     111 1244555555566678999999


Q ss_pred             cCCC
Q 018067          254 TVSA  257 (361)
Q Consensus       254 ~~g~  257 (361)
                      +++.
T Consensus        84 ~A~~   87 (337)
T 2c29_D           84 VATP   87 (337)
T ss_dssp             CCCC
T ss_pred             eccc
Confidence            8863

>1qyc_A Phenylcoumaran benzylic ether reductase PT1; NADPH-dependent aromatic alcohol reductases, pcber, PLR, IFR, lignans, isoflavonoids, plant protein; 2.20A {Pinus taeda} SCOP: c.2.1.2

Probab=95.82  E-value=0.024  Score=50.36  Aligned_cols=92  Identities=17%  Similarity=0.249  Sum_probs=61.0

Q ss_pred             CCEEEEEcC-ChHHHHHHHHHHHcCCeEEEEeCCch------hHHHHH--HHcCCCE-EecCCCHHHHHHhcCCccEEEE
Q 018067          184 GMHVGVVGL-GGLGHVAVKFAKAMGVKVTVISTSPS------KKSEAI--ERLGADS-FLVSRDQDEMQAAMGTMDGIID  253 (361)
Q Consensus       184 g~~vlV~Ga-g~vG~~a~~la~~~g~~vi~~~~~~~------~~~~~~--~~~g~~~-vv~~~~~~~~~~~~~g~d~vid  253 (361)
                      ..+|+|+|+ |.+|...+..+...|.+|++++++..      +...+.  +..|+.. ..|..+++.+.++..++|+||.
T Consensus         4 ~~~ilVtGatG~iG~~l~~~L~~~g~~V~~l~R~~~~~~~~~~~~~~~~l~~~~v~~v~~D~~d~~~l~~~~~~~d~vi~   83 (308)
T 1qyc_A            4 RSRILLIGATGYIGRHVAKASLDLGHPTFLLVRESTASSNSEKAQLLESFKASGANIVHGSIDDHASLVEAVKNVDVVIS   83 (308)
T ss_dssp             CCCEEEESTTSTTHHHHHHHHHHTTCCEEEECCCCCTTTTHHHHHHHHHHHTTTCEEECCCTTCHHHHHHHHHTCSEEEE
T ss_pred             CCEEEEEcCCcHHHHHHHHHHHhCCCCEEEEECCcccccCHHHHHHHHHHHhCCCEEEEeccCCHHHHHHHHcCCCEEEE
Confidence            357999998 99999999999999999999998742      211111  1234432 2355666767776678999999


Q ss_pred             cCCCcc--cHHHHHhcccc---CCEEE
Q 018067          254 TVSAVH--PLMPLIGLLKS---QGKLV  275 (361)
Q Consensus       254 ~~g~~~--~~~~~~~~l~~---~G~~v  275 (361)
                      +++...  .....++.++.   -.+++
T Consensus        84 ~a~~~~~~~~~~l~~aa~~~g~v~~~v  110 (308)
T 1qyc_A           84 TVGSLQIESQVNIIKAIKEVGTVKRFF  110 (308)
T ss_dssp             CCCGGGSGGGHHHHHHHHHHCCCSEEE
T ss_pred             CCcchhhhhHHHHHHHHHhcCCCceEe
Confidence            998632  12344444433   24676

>1fbn_A MJ fibrillarin homologue; MJ proteins, ribosomal RNA processing, snoRNP, structural genomics, BSGC structure funded by NIH; 1.60A {Methanocaldococcus jannaschii} SCOP: c.66.1.3 PDB: 1g8s_A

Probab=95.81  E-value=0.031  Score=47.49  Aligned_cols=97  Identities=15%  Similarity=0.127  Sum_probs=64.7

Q ss_pred             CCCCCCEEEEEcCChHHHHHHHHHHHcC-CeEEEEeCCchhHHHHHHHcCC--CE-Ee--cCCCHHHHHHhcCCccEEEE
Q 018067          180 LDKPGMHVGVVGLGGLGHVAVKFAKAMG-VKVTVISTSPSKKSEAIERLGA--DS-FL--VSRDQDEMQAAMGTMDGIID  253 (361)
Q Consensus       180 ~~~~g~~vlV~Gag~vG~~a~~la~~~g-~~vi~~~~~~~~~~~~~~~~g~--~~-vv--~~~~~~~~~~~~~g~d~vid  253 (361)
                      .++++++||-+|+|. |..+..+++..| .+|+.++.+++..+.+.+....  +. .+  +..++.......+.+|+|+.
T Consensus        71 ~~~~~~~VLDlGcG~-G~~~~~la~~~~~~~v~gvD~s~~~~~~a~~~~~~~~~v~~~~~d~~~~~~~~~~~~~~D~v~~  149 (230)
T 1fbn_A           71 PIKRDSKILYLGASA-GTTPSHVADIADKGIVYAIEYAPRIMRELLDACAERENIIPILGDANKPQEYANIVEKVDVIYE  149 (230)
T ss_dssp             CCCTTCEEEEESCCS-SHHHHHHHHHTTTSEEEEEESCHHHHHHHHHHTTTCTTEEEEECCTTCGGGGTTTSCCEEEEEE
T ss_pred             CCCCCCEEEEEcccC-CHHHHHHHHHcCCcEEEEEECCHHHHHHHHHHhhcCCCeEEEECCCCCcccccccCccEEEEEE
Confidence            367899999999976 888889998876 5999999998766555333221  11 11  11111110112257999996


Q ss_pred             cCCCc---c-cHHHHHhccccCCEEEEe
Q 018067          254 TVSAV---H-PLMPLIGLLKSQGKLVLV  277 (361)
Q Consensus       254 ~~g~~---~-~~~~~~~~l~~~G~~v~~  277 (361)
                      .....   . .+..+.+.|+++|+++..
T Consensus       150 ~~~~~~~~~~~l~~~~~~LkpgG~l~i~  177 (230)
T 1fbn_A          150 DVAQPNQAEILIKNAKWFLKKGGYGMIA  177 (230)
T ss_dssp             CCCSTTHHHHHHHHHHHHEEEEEEEEEE
T ss_pred             ecCChhHHHHHHHHHHHhCCCCcEEEEE
Confidence            65554   2 367788899999999886

>1uay_A Type II 3-hydroxyacyl-COA dehydrogenase; beta oxidation, fatty acid, structural genomi structural genomics/proteomics initiative, RSGI; HET: ADN; 1.40A {Thermus thermophilus} SCOP: c.2.1.2

Probab=95.80  E-value=0.011  Score=50.63  Aligned_cols=68  Identities=21%  Similarity=0.216  Sum_probs=48.4

Q ss_pred             CCEEEEEcC-ChHHHHHHHHHHHcCCeEEEEeCCchhHHHHHHHcCCCEEecCCCHHHHHHhc------CCccEEEEcCC
Q 018067          184 GMHVGVVGL-GGLGHVAVKFAKAMGVKVTVISTSPSKKSEAIERLGADSFLVSRDQDEMQAAM------GTMDGIIDTVS  256 (361)
Q Consensus       184 g~~vlV~Ga-g~vG~~a~~la~~~g~~vi~~~~~~~~~~~~~~~~g~~~vv~~~~~~~~~~~~------~g~d~vid~~g  256 (361)
                      ++++||.|+ |.+|...++.+...|++|++++++.+ .    ++. .-...|..+++.+.++.      +++|++|+++|
T Consensus         2 ~k~vlVtGasggiG~~la~~l~~~G~~V~~~~r~~~-~----~~~-~~~~~D~~~~~~~~~~~~~~~~~~~~d~li~~ag   75 (242)
T 1uay_A            2 ERSALVTGGASGLGRAAALALKARGYRVVVLDLRRE-G----EDL-IYVEGDVTREEDVRRAVARAQEEAPLFAVVSAAG   75 (242)
T ss_dssp             CCEEEEETTTSHHHHHHHHHHHHHTCEEEEEESSCC-S----SSS-EEEECCTTCHHHHHHHHHHHHHHSCEEEEEECCC
T ss_pred             CCEEEEeCCCChHHHHHHHHHHHCCCEEEEEccCcc-c----cce-EEEeCCCCCHHHHHHHHHHHHhhCCceEEEEccc
Confidence            578999998 99999999999888999999998764 1    111 01123555555444332      37999999987


Q ss_pred             C
Q 018067          257 A  257 (361)
Q Consensus       257 ~  257 (361)
                      .
T Consensus        76 ~   76 (242)
T 1uay_A           76 V   76 (242)
T ss_dssp             C
T ss_pred             c
Confidence            4

>3q2i_A Dehydrogenase; rossmann fold, UDP-sugar binding, NAD binding oxidoreductase; HET: NAD HP7; 1.50A {Chromobacterium violaceum} PDB: 3q2k_A*

Probab=95.79  E-value=0.12  Score=46.92  Aligned_cols=133  Identities=14%  Similarity=0.045  Sum_probs=82.6

Q ss_pred             CEEEEEcCChHHHHHHHHHHHc--CCeEEEE-eCCchhHHHHHHHcCCCEEecCCCHHHHHHhcCCccEEEEcCCCcccH
Q 018067          185 MHVGVVGLGGLGHVAVKFAKAM--GVKVTVI-STSPSKKSEAIERLGADSFLVSRDQDEMQAAMGTMDGIIDTVSAVHPL  261 (361)
Q Consensus       185 ~~vlV~Gag~vG~~a~~la~~~--g~~vi~~-~~~~~~~~~~~~~~g~~~vv~~~~~~~~~~~~~g~d~vid~~g~~~~~  261 (361)
                      -+|.|+|+|.+|...+..++..  +++++.+ ++++++...+++++|+ ..  +.+.+.+.. ...+|+|+.++....-.
T Consensus        14 ~rvgiiG~G~~g~~~~~~l~~~~~~~~lvav~d~~~~~~~~~~~~~~~-~~--~~~~~~ll~-~~~~D~V~i~tp~~~h~   89 (354)
T 3q2i_A           14 IRFALVGCGRIANNHFGALEKHADRAELIDVCDIDPAALKAAVERTGA-RG--HASLTDMLA-QTDADIVILTTPSGLHP   89 (354)
T ss_dssp             EEEEEECCSTTHHHHHHHHHHTTTTEEEEEEECSSHHHHHHHHHHHCC-EE--ESCHHHHHH-HCCCSEEEECSCGGGHH
T ss_pred             ceEEEEcCcHHHHHHHHHHHhCCCCeEEEEEEcCCHHHHHHHHHHcCC-ce--eCCHHHHhc-CCCCCEEEECCCcHHHH
Confidence            4699999999998888877766  6787744 5566666777788887 33  233222211 14799999999876545


Q ss_pred             HHHHhccccCCEEEEecCCCCCcccChHH------H-HhCCcE-EEecccCCHHHHHHHHHHHHcCCCceeE
Q 018067          262 MPLIGLLKSQGKLVLVGAPEKPLELPAFS------L-LMGRKI-VGGSMIGGMKETQEMIDFAAKHNIRADI  325 (361)
Q Consensus       262 ~~~~~~l~~~G~~v~~g~~~~~~~~~~~~------~-~~~~~~-i~g~~~~~~~~~~~~~~ll~~~~~~~~~  325 (361)
                      ..+..+++.| +-+.+..   ++..+..+      . -.++.. ..+........++.+.+++++|.+-...
T Consensus        90 ~~~~~al~~g-k~v~~EK---P~a~~~~~~~~l~~~a~~~g~~~~v~~~~r~~p~~~~~k~~i~~g~iG~i~  157 (354)
T 3q2i_A           90 TQSIECSEAG-FHVMTEK---PMATRWEDGLEMVKAADKAKKHLFVVKQNRRNATLQLLKRAMQEKRFGRIY  157 (354)
T ss_dssp             HHHHHHHHTT-CEEEECS---SSCSSHHHHHHHHHHHHHHTCCEEECCGGGGSHHHHHHHHHHHTTTTCSEE
T ss_pred             HHHHHHHHCC-CCEEEeC---CCcCCHHHHHHHHHHHHHhCCeEEEEEcccCCHHHHHHHHHHhcCCCCceE
Confidence            6666677665 5555543   23332221      1 122333 3454444445678888889888875443

>4eue_A Putative reductase CA_C0462; TER, biofuel, synthetic biology, catalytic mechan substrate specificity, oxidoreductase; HET: NAI; 2.00A {Clostridium acetobutylicum} PDB: 4euf_A* 4euh_A*

Probab=95.78  E-value=0.055  Score=50.52  Aligned_cols=79  Identities=14%  Similarity=0.061  Sum_probs=52.0

Q ss_pred             CCCCCCCEEEEEcC-ChHHHH--HHHHHHHcCCeEEEEeCCch---------------hHHHHHHHcCCCE---EecCCC
Q 018067          179 GLDKPGMHVGVVGL-GGLGHV--AVKFAKAMGVKVTVISTSPS---------------KKSEAIERLGADS---FLVSRD  237 (361)
Q Consensus       179 ~~~~~g~~vlV~Ga-g~vG~~--a~~la~~~g~~vi~~~~~~~---------------~~~~~~~~~g~~~---vv~~~~  237 (361)
                      ..+..|+++||.|+ +++|++  .+..+...|++|++++++.+               ......++.|...   ..|-.+
T Consensus        55 ~~~~~gK~aLVTGassGIG~A~aia~ala~~Ga~Vi~~~r~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~Dvtd  134 (418)
T 4eue_A           55 IGFRGPKKVLIVGASSGFGLATRISVAFGGPEAHTIGVSYETGATDRRIGTAGWYNNIFFKEFAKKKGLVAKNFIEDAFS  134 (418)
T ss_dssp             CCCCCCSEEEEESCSSHHHHHHHHHHHHSSSCCEEEEEECCCCCCSSCCCCHHHHHHHHHHHHHHHTTCCEEEEESCTTC
T ss_pred             CcCCCCCEEEEECCCcHHHHHHHHHHHHHhCCCEEEEEecCcchhhhcccccccchHHHHHHHHHHcCCcEEEEEeeCCC
Confidence            44578899999997 899998  55555556999999887542               2233445566542   224455


Q ss_pred             HHHHHHh-------cCCccEEEEcCCC
Q 018067          238 QDEMQAA-------MGTMDGIIDTVSA  257 (361)
Q Consensus       238 ~~~~~~~-------~~g~d~vid~~g~  257 (361)
                      ++.+.++       .+++|++++++|.
T Consensus       135 ~~~v~~~v~~i~~~~G~IDiLVnNAG~  161 (418)
T 4eue_A          135 NETKDKVIKYIKDEFGKIDLFVYSLAA  161 (418)
T ss_dssp             HHHHHHHHHHHHHTTCCEEEEEECCCC
T ss_pred             HHHHHHHHHHHHHHcCCCCEEEECCcc
Confidence            4433322       2579999999886

>3e9m_A Oxidoreductase, GFO/IDH/MOCA family; GFO/LDH/MOCA, PSI-II, dimeric dihydodiol dehydrogenase, structural genomics; 2.70A {Enterococcus faecalis}

Probab=95.77  E-value=0.11  Score=46.71  Aligned_cols=132  Identities=14%  Similarity=0.032  Sum_probs=79.9

Q ss_pred             CEEEEEcCChHHHHHHHHHHHc-CCeEEEE-eCCchhHHHHHHHcCCCEEecCCCHHHHHHhcCCccEEEEcCCCcccHH
Q 018067          185 MHVGVVGLGGLGHVAVKFAKAM-GVKVTVI-STSPSKKSEAIERLGADSFLVSRDQDEMQAAMGTMDGIIDTVSAVHPLM  262 (361)
Q Consensus       185 ~~vlV~Gag~vG~~a~~la~~~-g~~vi~~-~~~~~~~~~~~~~~g~~~vv~~~~~~~~~~~~~g~d~vid~~g~~~~~~  262 (361)
                      -+|.|+|+|.+|...+..++.. +++++.+ +++.++...+++++|...+  +.+.+.+.. ...+|+|+.++....-..
T Consensus         6 ~~igiiG~G~~g~~~~~~l~~~~~~~l~av~d~~~~~~~~~~~~~~~~~~--~~~~~~ll~-~~~~D~V~i~tp~~~h~~   82 (330)
T 3e9m_A            6 IRYGIMSTAQIVPRFVAGLRESAQAEVRGIASRRLENAQKMAKELAIPVA--YGSYEELCK-DETIDIIYIPTYNQGHYS   82 (330)
T ss_dssp             EEEEECSCCTTHHHHHHHHHHSSSEEEEEEBCSSSHHHHHHHHHTTCCCC--BSSHHHHHH-CTTCSEEEECCCGGGHHH
T ss_pred             EEEEEECchHHHHHHHHHHHhCCCcEEEEEEeCCHHHHHHHHHHcCCCce--eCCHHHHhc-CCCCCEEEEcCCCHHHHH
Confidence            3688999999999888888775 6677754 5556666777788886422  233222211 237999999998876466


Q ss_pred             HHHhccccCCEEEEecCCCCCcccChHH------H-HhCCcEE-EecccCCHHHHHHHHHHHHcCCCce
Q 018067          263 PLIGLLKSQGKLVLVGAPEKPLELPAFS------L-LMGRKIV-GGSMIGGMKETQEMIDFAAKHNIRA  323 (361)
Q Consensus       263 ~~~~~l~~~G~~v~~g~~~~~~~~~~~~------~-~~~~~~i-~g~~~~~~~~~~~~~~ll~~~~~~~  323 (361)
                      .+..+++.| +-+++..   +...+..+      . -.+++.+ .+........++.+.+++++|.+-.
T Consensus        83 ~~~~al~~g-k~vl~EK---P~~~~~~e~~~l~~~a~~~g~~~~v~~~~r~~p~~~~~k~~i~~g~iG~  147 (330)
T 3e9m_A           83 AAKLALSQG-KPVLLEK---PFTLNAAEAEELFAIAQEQGVFLMEAQKSVFLPITQKVKATIQEGGLGE  147 (330)
T ss_dssp             HHHHHHHTT-CCEEECS---SCCSSHHHHHHHHHHHHHTTCCEEECCSGGGCHHHHHHHHHHHTTTTCS
T ss_pred             HHHHHHHCC-CeEEEeC---CCCCCHHHHHHHHHHHHHcCCeEEEEEhhhhCHHHHHHHHHHhCCCCCC
Confidence            667777665 4455533   22222221      1 1233333 3333333345777778888877643

>3dty_A Oxidoreductase, GFO/IDH/MOCA family; MGCL2, tetramer, PSI-2, 11131, NYSGXRC, structural genomics, protein structure initiative; 2.04A {Pseudomonas syringae PV}

Probab=95.77  E-value=0.088  Score=48.82  Aligned_cols=136  Identities=18%  Similarity=0.130  Sum_probs=83.3

Q ss_pred             CEEEEEcCCh---HHHHHHHHHHHcC-CeEEE--EeCCchhHHHHHHHcCCCEEecCCCHHHHHHh-c---CCccEEEEc
Q 018067          185 MHVGVVGLGG---LGHVAVKFAKAMG-VKVTV--ISTSPSKKSEAIERLGADSFLVSRDQDEMQAA-M---GTMDGIIDT  254 (361)
Q Consensus       185 ~~vlV~Gag~---vG~~a~~la~~~g-~~vi~--~~~~~~~~~~~~~~~g~~~vv~~~~~~~~~~~-~---~g~d~vid~  254 (361)
                      -+|.|+|+|.   +|...+..++..+ ++++.  .+++.++.+.+++++|....-.+.+.+.+... .   ..+|+|+-+
T Consensus        13 ~rvgiiG~G~~~~ig~~h~~~~~~~~~~~lva~v~d~~~~~a~~~a~~~g~~~~~~~~~~~~ll~~~~~~~~~vD~V~i~   92 (398)
T 3dty_A           13 IRWAMVGGGSQSQIGYIHRCAALRDNTFVLVAGAFDIDPIRGSAFGEQLGVDSERCYADYLSMFEQEARRADGIQAVSIA   92 (398)
T ss_dssp             EEEEEEECCTTCSSHHHHHHHHHGGGSEEEEEEECCSSHHHHHHHHHHTTCCGGGBCSSHHHHHHHHTTCTTCCSEEEEE
T ss_pred             ceEEEEcCCccchhHHHHHHHHhhCCCeEEEEEEeCCCHHHHHHHHHHhCCCcceeeCCHHHHHhcccccCCCCCEEEEC
Confidence            4689999998   9988887777664 67764  35667777788888987411123443333222 1   469999998


Q ss_pred             CCCcccHHHHHhccccCCEEEEecCCCCCcccChHH---H----HhCCcEE-EecccCCHHHHHHHHHHHHcCCCcee
Q 018067          255 VSAVHPLMPLIGLLKSQGKLVLVGAPEKPLELPAFS---L----LMGRKIV-GGSMIGGMKETQEMIDFAAKHNIRAD  324 (361)
Q Consensus       255 ~g~~~~~~~~~~~l~~~G~~v~~g~~~~~~~~~~~~---~----~~~~~~i-~g~~~~~~~~~~~~~~ll~~~~~~~~  324 (361)
                      +....-...+..+++. |+-|++.   +++..+..+   +    -.+++.+ .+........++.+-+++++|.+-..
T Consensus        93 tp~~~H~~~~~~al~a-GkhVl~E---KPla~~~~ea~~l~~~a~~~g~~~~v~~~~r~~p~~~~~k~~i~~G~iG~i  166 (398)
T 3dty_A           93 TPNGTHYSITKAALEA-GLHVVCE---KPLCFTVEQAENLRELSHKHNRIVGVTYGYAGHQLIEQAREMIAAGELGDV  166 (398)
T ss_dssp             SCGGGHHHHHHHHHHT-TCEEEEC---SCSCSCHHHHHHHHHHHHHTTCCEEECCGGGGSHHHHHHHHHHHTTTTCSE
T ss_pred             CCcHHHHHHHHHHHHC-CCeEEEe---CCCcCCHHHHHHHHHHHHHcCCeEEEEecccCCHHHHHHHHHHhcCCCCCe
Confidence            8876436667777765 5556663   334333322   1    1233333 34333333557778888888877543

>2ydy_A Methionine adenosyltransferase 2 subunit beta; oxidoreductase; 2.25A {Homo sapiens} PDB: 2ydx_A

Probab=95.77  E-value=0.012  Score=52.61  Aligned_cols=66  Identities=14%  Similarity=0.047  Sum_probs=38.4

Q ss_pred             CCEEEEEcC-ChHHHHHHHHHHHcCCeEEEEeCCchhHHHHHHHcCCCEEecCCCHHHHHHhcC--CccEEEEcCCC
Q 018067          184 GMHVGVVGL-GGLGHVAVKFAKAMGVKVTVISTSPSKKSEAIERLGADSFLVSRDQDEMQAAMG--TMDGIIDTVSA  257 (361)
Q Consensus       184 g~~vlV~Ga-g~vG~~a~~la~~~g~~vi~~~~~~~~~~~~~~~~g~~~vv~~~~~~~~~~~~~--g~d~vid~~g~  257 (361)
                      +.+|||+|+ |.+|..+++.+...|.+|++++++.++.       + -...|..+++.+.++..  ++|+||+++|.
T Consensus         2 ~~~vlVtGatG~iG~~l~~~L~~~g~~V~~~~r~~~~~-------~-~~~~Dl~d~~~~~~~~~~~~~d~vih~A~~   70 (315)
T 2ydy_A            2 NRRVLVTGATGLLGRAVHKEFQQNNWHAVGCGFRRARP-------K-FEQVNLLDSNAVHHIIHDFQPHVIVHCAAE   70 (315)
T ss_dssp             CCEEEEETTTSHHHHHHHHHHHTTTCEEEEEC--------------------------CHHHHHHHCCSEEEECC--
T ss_pred             CCeEEEECCCcHHHHHHHHHHHhCCCeEEEEccCCCCC-------C-eEEecCCCHHHHHHHHHhhCCCEEEECCcc
Confidence            468999998 9999999999998999999998765431       1 11123333333333322  68999999875

>1np3_A Ketol-acid reductoisomerase; A DEEP figure-OF-eight knot, C-terminal alpha-helical domain oxidoreductase; 2.00A {Pseudomonas aeruginosa} SCOP: a.100.1.2 c.2.1.6

Probab=95.76  E-value=0.052  Score=49.23  Aligned_cols=86  Identities=27%  Similarity=0.263  Sum_probs=60.1

Q ss_pred             CCEEEEEcCChHHHHHHHHHHHcCCeEEEEeCCchhHHHHHHHcCCCEEecCCCHHHHHHhcCCccEEEEcCCCcccHHH
Q 018067          184 GMHVGVVGLGGLGHVAVKFAKAMGVKVTVISTSPSKKSEAIERLGADSFLVSRDQDEMQAAMGTMDGIIDTVSAVHPLMP  263 (361)
Q Consensus       184 g~~vlV~Gag~vG~~a~~la~~~g~~vi~~~~~~~~~~~~~~~~g~~~vv~~~~~~~~~~~~~g~d~vid~~g~~~~~~~  263 (361)
                      +.+|.|+|+|.+|.+.+..++..|.+|++.+++.++....+++.|....    +.   .+.....|+||-++.... ...
T Consensus        16 ~~~I~IIG~G~mG~alA~~L~~~G~~V~~~~~~~~~~~~~a~~~G~~~~----~~---~e~~~~aDvVilavp~~~-~~~   87 (338)
T 1np3_A           16 GKKVAIIGYGSQGHAHACNLKDSGVDVTVGLRSGSATVAKAEAHGLKVA----DV---KTAVAAADVVMILTPDEF-QGR   87 (338)
T ss_dssp             TSCEEEECCSHHHHHHHHHHHHTTCCEEEECCTTCHHHHHHHHTTCEEE----CH---HHHHHTCSEEEECSCHHH-HHH
T ss_pred             CCEEEEECchHHHHHHHHHHHHCcCEEEEEECChHHHHHHHHHCCCEEc----cH---HHHHhcCCEEEEeCCcHH-HHH
Confidence            4569999999999999999999999999888887664555567786421    21   122236899999988755 333


Q ss_pred             HHh-----ccccCCEEEEe
Q 018067          264 LIG-----LLKSQGKLVLV  277 (361)
Q Consensus       264 ~~~-----~l~~~G~~v~~  277 (361)
                      .+.     .++++..++.+
T Consensus        88 v~~~~i~~~l~~~~ivi~~  106 (338)
T 1np3_A           88 LYKEEIEPNLKKGATLAFA  106 (338)
T ss_dssp             HHHHHTGGGCCTTCEEEES
T ss_pred             HHHHHHHhhCCCCCEEEEc
Confidence            333     45556566654

>3vc1_A Geranyl diphosphate 2-C-methyltransferase; rossmann fold, methyltransferase fold, SAM-dependent methyltransferase; HET: SAH GST GOL; 1.82A {Streptomyces coelicolor} PDB: 3vc2_A* 4f84_A* 4f85_A 4f86_A*

Probab=95.76  E-value=0.02  Score=51.24  Aligned_cols=103  Identities=17%  Similarity=0.138  Sum_probs=66.6

Q ss_pred             hhcCCCCCCCEEEEEcCChHHHHHHHHHHHcCCeEEEEeCCchhHHHHHH---HcCCC--EEecCCCHHHHHHhcCCccE
Q 018067          176 RFYGLDKPGMHVGVVGLGGLGHVAVKFAKAMGVKVTVISTSPSKKSEAIE---RLGAD--SFLVSRDQDEMQAAMGTMDG  250 (361)
Q Consensus       176 ~~~~~~~~g~~vlV~Gag~vG~~a~~la~~~g~~vi~~~~~~~~~~~~~~---~~g~~--~vv~~~~~~~~~~~~~g~d~  250 (361)
                      .....++++++||-+|+|. |..+..+++..|++|+.++.+++....+.+   ..|..  .-+...+........+.+|+
T Consensus       110 ~~l~~~~~~~~vLDiGcG~-G~~~~~la~~~~~~v~gvD~s~~~~~~a~~~~~~~~~~~~v~~~~~d~~~~~~~~~~fD~  188 (312)
T 3vc1_A          110 DHLGQAGPDDTLVDAGCGR-GGSMVMAHRRFGSRVEGVTLSAAQADFGNRRARELRIDDHVRSRVCNMLDTPFDKGAVTA  188 (312)
T ss_dssp             TTSCCCCTTCEEEEESCTT-SHHHHHHHHHHCCEEEEEESCHHHHHHHHHHHHHTTCTTTEEEEECCTTSCCCCTTCEEE
T ss_pred             HHhccCCCCCEEEEecCCC-CHHHHHHHHHcCCEEEEEeCCHHHHHHHHHHHHHcCCCCceEEEECChhcCCCCCCCEeE
Confidence            3334368899999999875 778888888878999999998876554432   23422  11111121111111247999


Q ss_pred             EEEcCC-----CcccHHHHHhccccCCEEEEecC
Q 018067          251 IIDTVS-----AVHPLMPLIGLLKSQGKLVLVGA  279 (361)
Q Consensus       251 vid~~g-----~~~~~~~~~~~l~~~G~~v~~g~  279 (361)
                      |+..-.     -...+..+.+.|+++|+++....
T Consensus       189 V~~~~~l~~~~~~~~l~~~~~~LkpgG~l~~~~~  222 (312)
T 3vc1_A          189 SWNNESTMYVDLHDLFSEHSRFLKVGGRYVTITG  222 (312)
T ss_dssp             EEEESCGGGSCHHHHHHHHHHHEEEEEEEEEEEE
T ss_pred             EEECCchhhCCHHHHHHHHHHHcCCCcEEEEEEc
Confidence            976422     23457788899999999998753

>3ou2_A SAM-dependent methyltransferase; O-methyltransferase, SAH; HET: SAH; 1.50A {Streptomyces luridus} PDB: 3ou6_A* 3ou7_A*

Probab=95.74  E-value=0.025  Score=47.29  Aligned_cols=100  Identities=14%  Similarity=0.039  Sum_probs=65.4

Q ss_pred             hhcCCCCCCCEEEEEcCChHHHHHHHHHHHcCCeEEEEeCCchhHHHHHHHcCC-CEEecCCCHHHHHHhcCCccEEEEc
Q 018067          176 RFYGLDKPGMHVGVVGLGGLGHVAVKFAKAMGVKVTVISTSPSKKSEAIERLGA-DSFLVSRDQDEMQAAMGTMDGIIDT  254 (361)
Q Consensus       176 ~~~~~~~~g~~vlV~Gag~vG~~a~~la~~~g~~vi~~~~~~~~~~~~~~~~g~-~~vv~~~~~~~~~~~~~g~d~vid~  254 (361)
                      .....++++.+||-+|+|. |..+..+++. |.+++.++.+++....+ ++.+. +.-+...+.... ...+.+|+|+-.
T Consensus        39 ~~l~~~~~~~~vLdiG~G~-G~~~~~l~~~-~~~v~~~D~s~~~~~~a-~~~~~~~~~~~~~d~~~~-~~~~~~D~v~~~  114 (218)
T 3ou2_A           39 ERLRAGNIRGDVLELASGT-GYWTRHLSGL-ADRVTALDGSAEMIAEA-GRHGLDNVEFRQQDLFDW-TPDRQWDAVFFA  114 (218)
T ss_dssp             HHHTTTTSCSEEEEESCTT-SHHHHHHHHH-SSEEEEEESCHHHHHHH-GGGCCTTEEEEECCTTSC-CCSSCEEEEEEE
T ss_pred             HHHhcCCCCCeEEEECCCC-CHHHHHHHhc-CCeEEEEeCCHHHHHHH-HhcCCCCeEEEecccccC-CCCCceeEEEEe
Confidence            3344467888999999875 7777777777 88999999988766555 44552 211111221111 123479999865


Q ss_pred             CCC--------cccHHHHHhccccCCEEEEecC
Q 018067          255 VSA--------VHPLMPLIGLLKSQGKLVLVGA  279 (361)
Q Consensus       255 ~g~--------~~~~~~~~~~l~~~G~~v~~g~  279 (361)
                      ..-        ...+..+.+.|+++|.++....
T Consensus       115 ~~l~~~~~~~~~~~l~~~~~~L~pgG~l~~~~~  147 (218)
T 3ou2_A          115 HWLAHVPDDRFEAFWESVRSAVAPGGVVEFVDV  147 (218)
T ss_dssp             SCGGGSCHHHHHHHHHHHHHHEEEEEEEEEEEE
T ss_pred             chhhcCCHHHHHHHHHHHHHHcCCCeEEEEEeC
Confidence            432        2346678889999999988754

>2f1k_A Prephenate dehydrogenase; tyrosine synthesis, X-RA crystallography structure, oxidoreductase; HET: OMT NAP; 1.55A {Synechocystis SP} SCOP: a.100.1.12 c.2.1.6

Probab=95.74  E-value=0.079  Score=46.38  Aligned_cols=86  Identities=20%  Similarity=0.160  Sum_probs=60.3

Q ss_pred             EEEEEcCChHHHHHHHHHHHcCCeEEEEeCCchhHHHHHHHcCCC-EEecCCCHHHHHHhcCCccEEEEcCCCcccHHHH
Q 018067          186 HVGVVGLGGLGHVAVKFAKAMGVKVTVISTSPSKKSEAIERLGAD-SFLVSRDQDEMQAAMGTMDGIIDTVSAVHPLMPL  264 (361)
Q Consensus       186 ~vlV~Gag~vG~~a~~la~~~g~~vi~~~~~~~~~~~~~~~~g~~-~vv~~~~~~~~~~~~~g~d~vid~~g~~~~~~~~  264 (361)
                      +|.|+|+|.+|.+.+..+...|.+|+++++++++...+ ++.|.. ...  .+   ..++ .++|+||-++.... ....
T Consensus         2 ~i~iiG~G~~G~~~a~~l~~~g~~V~~~~~~~~~~~~~-~~~g~~~~~~--~~---~~~~-~~~D~vi~av~~~~-~~~~   73 (279)
T 2f1k_A            2 KIGVVGLGLIGASLAGDLRRRGHYLIGVSRQQSTCEKA-VERQLVDEAG--QD---LSLL-QTAKIIFLCTPIQL-ILPT   73 (279)
T ss_dssp             EEEEECCSHHHHHHHHHHHHTTCEEEEECSCHHHHHHH-HHTTSCSEEE--SC---GGGG-TTCSEEEECSCHHH-HHHH
T ss_pred             EEEEEcCcHHHHHHHHHHHHCCCEEEEEECCHHHHHHH-HhCCCCcccc--CC---HHHh-CCCCEEEEECCHHH-HHHH
Confidence            58899999999999999988899999999888877666 466753 221  12   1234 57899999998654 3333


Q ss_pred             H----hccccCCEEEEecC
Q 018067          265 I----GLLKSQGKLVLVGA  279 (361)
Q Consensus       265 ~----~~l~~~G~~v~~g~  279 (361)
                      +    ..++++..++.++.
T Consensus        74 ~~~l~~~~~~~~~vv~~~~   92 (279)
T 2f1k_A           74 LEKLIPHLSPTAIVTDVAS   92 (279)
T ss_dssp             HHHHGGGSCTTCEEEECCS
T ss_pred             HHHHHhhCCCCCEEEECCC
Confidence            3    34556666766644

>3evt_A Phosphoglycerate dehydrogenase; structural genomics, PSI-2, protein structure initiative; 2.20A {Lactobacillus plantarum}

Probab=95.72  E-value=0.011  Score=53.35  Aligned_cols=89  Identities=19%  Similarity=0.219  Sum_probs=60.6

Q ss_pred             CCCCEEEEEcCChHHHHHHHHHHHcCCeEEEEeCCchhHHHHHHHcCCCEEecCCCHHHHHHhcCCccEEEEcCCCc---
Q 018067          182 KPGMHVGVVGLGGLGHVAVKFAKAMGVKVTVISTSPSKKSEAIERLGADSFLVSRDQDEMQAAMGTMDGIIDTVSAV---  258 (361)
Q Consensus       182 ~~g~~vlV~Gag~vG~~a~~la~~~g~~vi~~~~~~~~~~~~~~~~g~~~vv~~~~~~~~~~~~~g~d~vid~~g~~---  258 (361)
                      -.|++|.|+|.|.+|..+++.++.+|.+|++.+++.+...      .....+...   .+.++....|+|+-++...   
T Consensus       135 l~gktvGIiGlG~IG~~vA~~l~~~G~~V~~~dr~~~~~~------~~~~~~~~~---~l~ell~~aDvV~l~lPlt~~t  205 (324)
T 3evt_A          135 LTGQQLLIYGTGQIGQSLAAKASALGMHVIGVNTTGHPAD------HFHETVAFT---ATADALATANFIVNALPLTPTT  205 (324)
T ss_dssp             STTCEEEEECCSHHHHHHHHHHHHTTCEEEEEESSCCCCT------TCSEEEEGG---GCHHHHHHCSEEEECCCCCGGG
T ss_pred             ccCCeEEEECcCHHHHHHHHHHHhCCCEEEEECCCcchhH------hHhhccccC---CHHHHHhhCCEEEEcCCCchHH
Confidence            3588999999999999999999999999999988764321      122222111   1222333578888876532   


Q ss_pred             --ccHHHHHhccccCCEEEEecC
Q 018067          259 --HPLMPLIGLLKSQGKLVLVGA  279 (361)
Q Consensus       259 --~~~~~~~~~l~~~G~~v~~g~  279 (361)
                        ..-...+..++++..+|.++.
T Consensus       206 ~~li~~~~l~~mk~gailIN~aR  228 (324)
T 3evt_A          206 HHLFSTELFQQTKQQPMLINIGR  228 (324)
T ss_dssp             TTCBSHHHHHTCCSCCEEEECSC
T ss_pred             HHhcCHHHHhcCCCCCEEEEcCC
Confidence              112456777888888888874

>1ek6_A UDP-galactose 4-epimerase; short-chain dehydrogenase, galactosemia, isomerase; HET: NAI UPG; 1.50A {Homo sapiens} SCOP: c.2.1.2 PDB: 1ek5_A* 1hzj_A* 1i3k_A* 1i3l_A* 1i3m_A* 1i3n_A*

Probab=95.71  E-value=0.045  Score=49.42  Aligned_cols=75  Identities=20%  Similarity=0.112  Sum_probs=51.3

Q ss_pred             CCEEEEEcC-ChHHHHHHHHHHHcCCeEEEEeCCch----------hHHHHHHHcC--CCE-EecCCCHHHHHHhcC--C
Q 018067          184 GMHVGVVGL-GGLGHVAVKFAKAMGVKVTVISTSPS----------KKSEAIERLG--ADS-FLVSRDQDEMQAAMG--T  247 (361)
Q Consensus       184 g~~vlV~Ga-g~vG~~a~~la~~~g~~vi~~~~~~~----------~~~~~~~~~g--~~~-vv~~~~~~~~~~~~~--g  247 (361)
                      +.+|||.|+ |.+|..+++.+...|.+|+++++...          ....+.+..+  ... ..|..+.+.+.++..  +
T Consensus         2 ~~~vlVtGatG~iG~~l~~~L~~~g~~V~~~~r~~~~~r~~~~~~~~~~~l~~~~~~~~~~~~~D~~~~~~~~~~~~~~~   81 (348)
T 1ek6_A            2 AEKVLVTGGAGYIGSHTVLELLEAGYLPVVIDNFHNAFRGGGSLPESLRRVQELTGRSVEFEEMDILDQGALQRLFKKYS   81 (348)
T ss_dssp             CSEEEEETTTSHHHHHHHHHHHHTTCCEEEEECSSSSCBCSSSSBHHHHHHHHHHTCCCEEEECCTTCHHHHHHHHHHCC
T ss_pred             CCEEEEECCCCHHHHHHHHHHHHCCCEEEEEecCCcccccccccHHHHHHHHhccCCceEEEECCCCCHHHHHHHHHhcC
Confidence            468999997 99999999999889999999986432          2222322123  221 235556666655544  8


Q ss_pred             ccEEEEcCCCc
Q 018067          248 MDGIIDTVSAV  258 (361)
Q Consensus       248 ~d~vid~~g~~  258 (361)
                      +|+||++++..
T Consensus        82 ~d~vih~A~~~   92 (348)
T 1ek6_A           82 FMAVIHFAGLK   92 (348)
T ss_dssp             EEEEEECCSCC
T ss_pred             CCEEEECCCCc
Confidence            99999999853

>3ius_A Uncharacterized conserved protein; APC63810, silicibacter pomeroyi DSS, structural genomics, PSI-2, protein structure initiative; HET: MSE; 1.66A {Ruegeria pomeroyi dss-3}

Probab=95.70  E-value=0.028  Score=49.33  Aligned_cols=89  Identities=11%  Similarity=0.111  Sum_probs=61.5

Q ss_pred             CEEEEEcCChHHHHHHHHHHHcCCeEEEEeCCchhHHHHHHHcCCCEE-ecCCCHHHHHHhcCCccEEEEcCCCcc----
Q 018067          185 MHVGVVGLGGLGHVAVKFAKAMGVKVTVISTSPSKKSEAIERLGADSF-LVSRDQDEMQAAMGTMDGIIDTVSAVH----  259 (361)
Q Consensus       185 ~~vlV~Gag~vG~~a~~la~~~g~~vi~~~~~~~~~~~~~~~~g~~~v-v~~~~~~~~~~~~~g~d~vid~~g~~~----  259 (361)
                      .+|||+|+|.+|...+..+...|.+|++++++.++...+ ...+...+ .|..+.+     ..++|+||.+++...    
T Consensus         6 ~~ilVtGaG~iG~~l~~~L~~~g~~V~~~~r~~~~~~~~-~~~~~~~~~~D~~d~~-----~~~~d~vi~~a~~~~~~~~   79 (286)
T 3ius_A            6 GTLLSFGHGYTARVLSRALAPQGWRIIGTSRNPDQMEAI-RASGAEPLLWPGEEPS-----LDGVTHLLISTAPDSGGDP   79 (286)
T ss_dssp             CEEEEETCCHHHHHHHHHHGGGTCEEEEEESCGGGHHHH-HHTTEEEEESSSSCCC-----CTTCCEEEECCCCBTTBCH
T ss_pred             CcEEEECCcHHHHHHHHHHHHCCCEEEEEEcChhhhhhH-hhCCCeEEEecccccc-----cCCCCEEEECCCccccccH
Confidence            579999999999999999998999999999998776555 34454322 2333311     468999999997532    


Q ss_pred             cHHHHHhcccc----CCEEEEecC
Q 018067          260 PLMPLIGLLKS----QGKLVLVGA  279 (361)
Q Consensus       260 ~~~~~~~~l~~----~G~~v~~g~  279 (361)
                      .....++.++.    -.+++.++.
T Consensus        80 ~~~~l~~a~~~~~~~~~~~v~~Ss  103 (286)
T 3ius_A           80 VLAALGDQIAARAAQFRWVGYLST  103 (286)
T ss_dssp             HHHHHHHHHHHTGGGCSEEEEEEE
T ss_pred             HHHHHHHHHHhhcCCceEEEEeec
Confidence            12334444433    368887764

>2uyy_A N-PAC protein; long-chain dehydrogenase, cytokine; HET: NA7; 2.5A {Homo sapiens}

Probab=95.69  E-value=0.031  Score=50.12  Aligned_cols=88  Identities=25%  Similarity=0.243  Sum_probs=61.3

Q ss_pred             CEEEEEcCChHHHHHHHHHHHcCCeEEEEeCCchhHHHHHHHcCCCEEecCCCHHHHHHhcCCccEEEEcCCCcccHHHH
Q 018067          185 MHVGVVGLGGLGHVAVKFAKAMGVKVTVISTSPSKKSEAIERLGADSFLVSRDQDEMQAAMGTMDGIIDTVSAVHPLMPL  264 (361)
Q Consensus       185 ~~vlV~Gag~vG~~a~~la~~~g~~vi~~~~~~~~~~~~~~~~g~~~vv~~~~~~~~~~~~~g~d~vid~~g~~~~~~~~  264 (361)
                      .+|.|+|+|.+|...+..+...|.+|++.++++++.+.+. +.|...   ..+..   +....+|+||.++..+..+...
T Consensus        31 ~~I~iIG~G~mG~~~a~~l~~~g~~V~~~~~~~~~~~~~~-~~g~~~---~~~~~---~~~~~~DvVi~av~~~~~~~~v  103 (316)
T 2uyy_A           31 KKIGFLGLGLMGSGIVSNLLKMGHTVTVWNRTAEKCDLFI-QEGARL---GRTPA---EVVSTCDITFACVSDPKAAKDL  103 (316)
T ss_dssp             SCEEEECCSHHHHHHHHHHHHTTCCEEEECSSGGGGHHHH-HTTCEE---CSCHH---HHHHHCSEEEECCSSHHHHHHH
T ss_pred             CeEEEEcccHHHHHHHHHHHhCCCEEEEEeCCHHHHHHHH-HcCCEE---cCCHH---HHHhcCCEEEEeCCCHHHHHHH
Confidence            5699999999999999988888999999999888777664 456531   22221   2223589999999964435544


Q ss_pred             H-------hccccCCEEEEecC
Q 018067          265 I-------GLLKSQGKLVLVGA  279 (361)
Q Consensus       265 ~-------~~l~~~G~~v~~g~  279 (361)
                      +       ..++++..++.++.
T Consensus       104 ~~~~~~~~~~l~~~~~vv~~s~  125 (316)
T 2uyy_A          104 VLGPSGVLQGIRPGKCYVDMST  125 (316)
T ss_dssp             HHSTTCGGGGCCTTCEEEECSC
T ss_pred             HcCchhHhhcCCCCCEEEECCC
Confidence            4       33556666776654

>2o7s_A DHQ-SDH PR, bifunctional 3-dehydroquinate dehydratase/shikima dehydrogenase; shikimate, NADPH, dehydroshikimate, bifunctional enzyme; HET: DHK TLA NAP; 1.78A {Arabidopsis thaliana} PDB: 2o7q_A* 2gpt_A*

Probab=95.68  E-value=0.018  Score=55.56  Aligned_cols=71  Identities=25%  Similarity=0.279  Sum_probs=50.8

Q ss_pred             CCCEEEEEcCChHHHHHHHHHHHcCCeEEEEeCCchhHHHHHHHcCCCEEecCCCHHHHHHh-cCCccEEEEcCCC
Q 018067          183 PGMHVGVVGLGGLGHVAVKFAKAMGVKVTVISTSPSKKSEAIERLGADSFLVSRDQDEMQAA-MGTMDGIIDTVSA  257 (361)
Q Consensus       183 ~g~~vlV~Gag~vG~~a~~la~~~g~~vi~~~~~~~~~~~~~~~~g~~~vv~~~~~~~~~~~-~~g~d~vid~~g~  257 (361)
                      .+++++|+|+|++|.+++..+...|++|+++.++.++...++++++... +...+   +... ...+|++|+++|.
T Consensus       363 ~~k~vlV~GaGGig~aia~~L~~~G~~V~i~~R~~~~a~~la~~~~~~~-~~~~d---l~~~~~~~~DilVN~agv  434 (523)
T 2o7s_A          363 ASKTVVVIGAGGAGKALAYGAKEKGAKVVIANRTYERALELAEAIGGKA-LSLTD---LDNYHPEDGMVLANTTSM  434 (523)
T ss_dssp             ---CEEEECCSHHHHHHHHHHHHHCC-CEEEESSHHHHHHHHHHTTC-C-EETTT---TTTC--CCSEEEEECSST
T ss_pred             CCCEEEEECCcHHHHHHHHHHHHCCCEEEEEECCHHHHHHHHHHcCCce-eeHHH---hhhccccCceEEEECCCC
Confidence            4678999999999999999999999999999999888888888886432 22222   1111 1348999999985

>3v5n_A Oxidoreductase; structural genomics, PSI-biology, protein structure initiati nysgrc, NEW YORK structural genomics research consortium; 2.80A {Sinorhizobium meliloti}

Probab=95.67  E-value=0.13  Score=48.12  Aligned_cols=136  Identities=20%  Similarity=0.214  Sum_probs=82.7

Q ss_pred             CEEEEEcCCh---HHHHHHHHHHHcC-CeEEE--EeCCchhHHHHHHHcCCCEEecCCCHHHHHHh----cCCccEEEEc
Q 018067          185 MHVGVVGLGG---LGHVAVKFAKAMG-VKVTV--ISTSPSKKSEAIERLGADSFLVSRDQDEMQAA----MGTMDGIIDT  254 (361)
Q Consensus       185 ~~vlV~Gag~---vG~~a~~la~~~g-~~vi~--~~~~~~~~~~~~~~~g~~~vv~~~~~~~~~~~----~~g~d~vid~  254 (361)
                      -+|.|+|+|.   +|...+..++..+ ++++.  .+++.++.+.+++++|....-.+.+.+.+.+.    ...+|+|+.+
T Consensus        38 ~rvgiiG~G~~~~ig~~h~~~~~~~~~~~lva~v~d~~~~~a~~~a~~~g~~~~~~~~~~~~ll~~~~~~~~~vD~V~I~  117 (417)
T 3v5n_A           38 IRLGMVGGGSGAFIGAVHRIAARLDDHYELVAGALSSTPEKAEASGRELGLDPSRVYSDFKEMAIREAKLKNGIEAVAIV  117 (417)
T ss_dssp             EEEEEESCC--CHHHHHHHHHHHHTSCEEEEEEECCSSHHHHHHHHHHHTCCGGGBCSCHHHHHHHHHHCTTCCSEEEEC
T ss_pred             ceEEEEcCCCchHHHHHHHHHHhhCCCcEEEEEEeCCCHHHHHHHHHHcCCCcccccCCHHHHHhcccccCCCCcEEEEC
Confidence            4799999988   9988887777665 57763  45667777788888887411123443333222    1469999999


Q ss_pred             CCCcccHHHHHhccccCCEEEEecCCCCCcccChHH------H-HhCCcE-EEecccCCHHHHHHHHHHHHcCCCcee
Q 018067          255 VSAVHPLMPLIGLLKSQGKLVLVGAPEKPLELPAFS------L-LMGRKI-VGGSMIGGMKETQEMIDFAAKHNIRAD  324 (361)
Q Consensus       255 ~g~~~~~~~~~~~l~~~G~~v~~g~~~~~~~~~~~~------~-~~~~~~-i~g~~~~~~~~~~~~~~ll~~~~~~~~  324 (361)
                      +....-...+..+++. |+-|++.-   ++..+..+      . -.+++. ..+........++.+.+++++|.+-..
T Consensus       118 tp~~~H~~~~~~al~a-GkhVl~EK---Pla~~~~ea~~l~~~a~~~g~~~~v~~~~R~~p~~~~~k~~i~~G~iG~i  191 (417)
T 3v5n_A          118 TPNHVHYAAAKEFLKR-GIHVICDK---PLTSTLADAKKLKKAADESDALFVLTHNYTGYPMVRQAREMIENGDIGAV  191 (417)
T ss_dssp             SCTTSHHHHHHHHHTT-TCEEEEES---SSCSSHHHHHHHHHHHHHCSSCEEEECGGGGSHHHHHHHHHHHTTTTCSE
T ss_pred             CCcHHHHHHHHHHHhC-CCeEEEEC---CCcCCHHHHHHHHHHHHHcCCEEEEEecccCCHHHHHHHHHHhcCCCCCe
Confidence            8876536667777665 45566643   33333222      1 123333 344444344567788888888887543

>1xea_A Oxidoreductase, GFO/IDH/MOCA family; structural genomics, protein structure initiative, NYSGXRC, VCA1048, GFO/IDH/MOCA family oxidoreductase; 2.65A {Vibrio cholerae} SCOP: c.2.1.3 d.81.1.5

Probab=95.65  E-value=0.037  Score=49.75  Aligned_cols=129  Identities=12%  Similarity=0.088  Sum_probs=77.6

Q ss_pred             EEEEEcCChHHH-HHHHHHHHc-CCeEEEEeCCchhHHHHHHHcCCCEEecCCCHHHHHHhcCCccEEEEcCCCcccHHH
Q 018067          186 HVGVVGLGGLGH-VAVKFAKAM-GVKVTVISTSPSKKSEAIERLGADSFLVSRDQDEMQAAMGTMDGIIDTVSAVHPLMP  263 (361)
Q Consensus       186 ~vlV~Gag~vG~-~a~~la~~~-g~~vi~~~~~~~~~~~~~~~~g~~~vv~~~~~~~~~~~~~g~d~vid~~g~~~~~~~  263 (361)
                      +|.|+|+|.+|. ..+..++.. ++++++.+++.++.+.+++++|....+. +..+.   +...+|+|+.++....-...
T Consensus         4 ~igiIG~G~ig~~~~~~~l~~~~~~~l~v~d~~~~~~~~~a~~~g~~~~~~-~~~~~---l~~~~D~V~i~tp~~~h~~~   79 (323)
T 1xea_A            4 KIAMIGLGDIAQKAYLPVLAQWPDIELVLCTRNPKVLGTLATRYRVSATCT-DYRDV---LQYGVDAVMIHAATDVHSTL   79 (323)
T ss_dssp             EEEEECCCHHHHHTHHHHHTTSTTEEEEEECSCHHHHHHHHHHTTCCCCCS-STTGG---GGGCCSEEEECSCGGGHHHH
T ss_pred             EEEEECCCHHHHHHHHHHHHhCCCceEEEEeCCHHHHHHHHHHcCCCcccc-CHHHH---hhcCCCEEEEECCchhHHHH
Confidence            588999999997 466666554 6788866777777777878888653111 11222   23479999999987654556


Q ss_pred             HHhccccCCEEEEecCCCCCcccChHH------HH-hCCcE-EEecccCCHHHHHHHHHHHHcCCCc
Q 018067          264 LIGLLKSQGKLVLVGAPEKPLELPAFS------LL-MGRKI-VGGSMIGGMKETQEMIDFAAKHNIR  322 (361)
Q Consensus       264 ~~~~l~~~G~~v~~g~~~~~~~~~~~~------~~-~~~~~-i~g~~~~~~~~~~~~~~ll~~~~~~  322 (361)
                      +..+++.| +-+.+..   +...+..+      .. .+++. +.+........++.+.+++++|.+-
T Consensus        80 ~~~al~~G-k~V~~EK---P~~~~~~~~~~l~~~a~~~g~~~~v~~~~r~~p~~~~~~~~i~~g~iG  142 (323)
T 1xea_A           80 AAFFLHLG-IPTFVDK---PLAASAQECENLYELAEKHHQPLYVGFNRRHIPLYNQHLSELAQQECG  142 (323)
T ss_dssp             HHHHHHTT-CCEEEES---CSCSSHHHHHHHHHHHHHTTCCEEEECGGGCCHHHHHHCHHHHHTSCT
T ss_pred             HHHHHHCC-CeEEEeC---CCcCCHHHHHHHHHHHHhcCCeEEEeeccccCHHHHHHHHHHhcCCcC
Confidence            66666654 4444432   22222221      11 23333 3444444445577777788887653

>1yqg_A Pyrroline-5-carboxylate reductase; structural genomics, PSI, structure initiative, midwest center for structural genomic oxidoreductase; 1.90A {Neisseria meningitidis} SCOP: a.100.1.10 c.2.1.6 PDB: 2ag8_A*

Probab=95.65  E-value=0.074  Score=46.09  Aligned_cols=84  Identities=13%  Similarity=0.160  Sum_probs=57.7

Q ss_pred             EEEEEcCChHHHHHHHHHHHcC-CeEEEEeCCchhHHHHHHHcCCCEEecCCCHHHHHHhcCCccEEEEcCCCcccHHHH
Q 018067          186 HVGVVGLGGLGHVAVKFAKAMG-VKVTVISTSPSKKSEAIERLGADSFLVSRDQDEMQAAMGTMDGIIDTVSAVHPLMPL  264 (361)
Q Consensus       186 ~vlV~Gag~vG~~a~~la~~~g-~~vi~~~~~~~~~~~~~~~~g~~~vv~~~~~~~~~~~~~g~d~vid~~g~~~~~~~~  264 (361)
                      +|.|+|+|.+|...+..+...| .+|++.++++++.+.+.+.+|.... ....     +.. .+|+||-++.... +...
T Consensus         2 ~i~iiG~G~mG~~~a~~l~~~g~~~v~~~~r~~~~~~~~~~~~g~~~~-~~~~-----~~~-~~D~vi~~v~~~~-~~~v   73 (263)
T 1yqg_A            2 NVYFLGGGNMAAAVAGGLVKQGGYRIYIANRGAEKRERLEKELGVETS-ATLP-----ELH-SDDVLILAVKPQD-MEAA   73 (263)
T ss_dssp             EEEEECCSHHHHHHHHHHHHHCSCEEEEECSSHHHHHHHHHHTCCEEE-SSCC-----CCC-TTSEEEECSCHHH-HHHH
T ss_pred             EEEEECchHHHHHHHHHHHHCCCCeEEEECCCHHHHHHHHHhcCCEEe-CCHH-----HHh-cCCEEEEEeCchh-HHHH
Confidence            5889999999999998888889 8999999998888877666676432 1111     123 6788888888433 5555


Q ss_pred             Hhcccc-CCEEEEe
Q 018067          265 IGLLKS-QGKLVLV  277 (361)
Q Consensus       265 ~~~l~~-~G~~v~~  277 (361)
                      +..+.+ +..++.+
T Consensus        74 ~~~l~~~~~ivv~~   87 (263)
T 1yqg_A           74 CKNIRTNGALVLSV   87 (263)
T ss_dssp             HTTCCCTTCEEEEC
T ss_pred             HHHhccCCCEEEEe
Confidence            555542 3344444

>3dr5_A Putative O-methyltransferase; Q8NRD3, CGL1119, PF01596, CGR117, NESG, structural genomics, PSI-2, protein structure initiative; 2.25A {Corynebacterium glutamicum}

Probab=95.65  E-value=0.071  Score=45.11  Aligned_cols=98  Identities=17%  Similarity=0.187  Sum_probs=63.9

Q ss_pred             CCCCCEEEEEcCChHHHHHHHHHHHc--CCeEEEEeCCchhHHHHH---HHcCCC---EEecCCC-HHHHHHh-cCCccE
Q 018067          181 DKPGMHVGVVGLGGLGHVAVKFAKAM--GVKVTVISTSPSKKSEAI---ERLGAD---SFLVSRD-QDEMQAA-MGTMDG  250 (361)
Q Consensus       181 ~~~g~~vlV~Gag~vG~~a~~la~~~--g~~vi~~~~~~~~~~~~~---~~~g~~---~vv~~~~-~~~~~~~-~~g~d~  250 (361)
                      .+++.+||=+|+|. |..++.+++.+  +.+|+.++.+++....+.   ++.|..   .-+...+ .+.+..+ .+.||+
T Consensus        54 ~~~~~~vLdiG~G~-G~~~~~la~~~~~~~~v~~vD~~~~~~~~a~~~~~~~g~~~~~i~~~~gda~~~l~~~~~~~fD~  132 (221)
T 3dr5_A           54 GNGSTGAIAITPAA-GLVGLYILNGLADNTTLTCIDPESEHQRQAKALFREAGYSPSRVRFLLSRPLDVMSRLANDSYQL  132 (221)
T ss_dssp             CTTCCEEEEESTTH-HHHHHHHHHHSCTTSEEEEECSCHHHHHHHHHHHHHTTCCGGGEEEECSCHHHHGGGSCTTCEEE
T ss_pred             CCCCCCEEEEcCCc-hHHHHHHHHhCCCCCEEEEEECCHHHHHHHHHHHHHcCCCcCcEEEEEcCHHHHHHHhcCCCcCe
Confidence            34566899899874 88888999886  679999998887654443   233433   1222222 2333333 357999


Q ss_pred             EEEcCCCc---ccHHHHHhccccCCEEEEecC
Q 018067          251 IIDTVSAV---HPLMPLIGLLKSQGKLVLVGA  279 (361)
Q Consensus       251 vid~~g~~---~~~~~~~~~l~~~G~~v~~g~  279 (361)
                      ||-.....   ..+..+.+.|++||.++.-..
T Consensus       133 V~~d~~~~~~~~~l~~~~~~LkpGG~lv~dn~  164 (221)
T 3dr5_A          133 VFGQVSPMDLKALVDAAWPLLRRGGALVLADA  164 (221)
T ss_dssp             EEECCCTTTHHHHHHHHHHHEEEEEEEEETTT
T ss_pred             EEEcCcHHHHHHHHHHHHHHcCCCcEEEEeCC
Confidence            97654432   246678899999999987543

>4huj_A Uncharacterized protein; PSI-biology, nysgrc, structural genomics, NEW YORK structura genomics research consortium, dinucleotide-binding; 1.77A {Sinorhizobium meliloti}

Probab=95.64  E-value=0.024  Score=47.97  Aligned_cols=87  Identities=16%  Similarity=0.206  Sum_probs=62.2

Q ss_pred             CEEEEEcCChHHHHHHHHHHHcCCeEEE-EeCCchhHHHHHHHcCCCEEecCCCHHHHHHhcCCccEEEEcCCCcccHHH
Q 018067          185 MHVGVVGLGGLGHVAVKFAKAMGVKVTV-ISTSPSKKSEAIERLGADSFLVSRDQDEMQAAMGTMDGIIDTVSAVHPLMP  263 (361)
Q Consensus       185 ~~vlV~Gag~vG~~a~~la~~~g~~vi~-~~~~~~~~~~~~~~~g~~~vv~~~~~~~~~~~~~g~d~vid~~g~~~~~~~  263 (361)
                      .+|.|+|+|.+|.+.+..+...|.+|++ .++++++.+.+.+++|.....  ...+.    ....|+||-++.... ...
T Consensus        24 mkI~IIG~G~mG~~la~~l~~~g~~V~~v~~r~~~~~~~l~~~~g~~~~~--~~~~~----~~~aDvVilavp~~~-~~~   96 (220)
T 4huj_A           24 TTYAIIGAGAIGSALAERFTAAQIPAIIANSRGPASLSSVTDRFGASVKA--VELKD----ALQADVVILAVPYDS-IAD   96 (220)
T ss_dssp             CCEEEEECHHHHHHHHHHHHHTTCCEEEECTTCGGGGHHHHHHHTTTEEE--CCHHH----HTTSSEEEEESCGGG-HHH
T ss_pred             CEEEEECCCHHHHHHHHHHHhCCCEEEEEECCCHHHHHHHHHHhCCCccc--ChHHH----HhcCCEEEEeCChHH-HHH
Confidence            4699999999999999999888999988 888888888887778865432  22221    346899999987655 566


Q ss_pred             HHhccc--cCCEEEEec
Q 018067          264 LIGLLK--SQGKLVLVG  278 (361)
Q Consensus       264 ~~~~l~--~~G~~v~~g  278 (361)
                      .+..++  ++..++.+.
T Consensus        97 v~~~l~~~~~~ivi~~~  113 (220)
T 4huj_A           97 IVTQVSDWGGQIVVDAS  113 (220)
T ss_dssp             HHTTCSCCTTCEEEECC
T ss_pred             HHHHhhccCCCEEEEcC
Confidence            665553  333444443

>1oc2_A DTDP-glucose 4,6-dehydratase; lyase, NADH, rhamnose; HET: TDX NAD; 1.5A {Streptococcus suis} SCOP: c.2.1.2 PDB: 1ker_A* 1ket_A* 1kep_A*

Probab=95.63  E-value=0.031  Score=50.53  Aligned_cols=73  Identities=19%  Similarity=0.201  Sum_probs=51.3

Q ss_pred             CEEEEEcC-ChHHHHHHHHHHHc--CCeEEEEeCCchh--HHHHHHHc---CCC-EEecCCCHHHHHHhcCCccEEEEcC
Q 018067          185 MHVGVVGL-GGLGHVAVKFAKAM--GVKVTVISTSPSK--KSEAIERL---GAD-SFLVSRDQDEMQAAMGTMDGIIDTV  255 (361)
Q Consensus       185 ~~vlV~Ga-g~vG~~a~~la~~~--g~~vi~~~~~~~~--~~~~~~~~---g~~-~vv~~~~~~~~~~~~~g~d~vid~~  255 (361)
                      .+|||.|+ |.+|...++.+...  |.+|+++++....  ...+ +.+   +.. ...|..+++.+.++..++|+||+++
T Consensus         5 ~~vlVTGatG~iG~~l~~~L~~~~~g~~V~~~~r~~~~~~~~~~-~~~~~~~~~~~~~Dl~d~~~~~~~~~~~d~vih~A   83 (348)
T 1oc2_A            5 KNIIVTGGAGFIGSNFVHYVYNNHPDVHVTVLDKLTYAGNKANL-EAILGDRVELVVGDIADAELVDKLAAKADAIVHYA   83 (348)
T ss_dssp             SEEEEETTTSHHHHHHHHHHHHHCTTCEEEEEECCCTTCCGGGT-GGGCSSSEEEEECCTTCHHHHHHHHTTCSEEEECC
T ss_pred             cEEEEeCCccHHHHHHHHHHHHhCCCCEEEEEeCCCCCCChhHH-hhhccCCeEEEECCCCCHHHHHHHhhcCCEEEECC
Confidence            47999997 99999999888777  8899999886421  1111 222   121 1235566777777778899999999


Q ss_pred             CCc
Q 018067          256 SAV  258 (361)
Q Consensus       256 g~~  258 (361)
                      +..
T Consensus        84 ~~~   86 (348)
T 1oc2_A           84 AES   86 (348)
T ss_dssp             SCC
T ss_pred             ccc
Confidence            853

>3ktd_A Prephenate dehydrogenase; structural genomics, joint center F structural genomics, JCSG, protein structure initiative; 2.60A {Corynebacterium glutamicum atcc 13032}

Probab=95.62  E-value=0.052  Score=49.22  Aligned_cols=92  Identities=20%  Similarity=0.108  Sum_probs=62.6

Q ss_pred             CEEEEEcCChHHHHHHHHHHHcCCeEEEEeCCchhHHHHHHHcCCCEEecCCCHHHHHHhcCCccEEEEcCCCcccHHHH
Q 018067          185 MHVGVVGLGGLGHVAVKFAKAMGVKVTVISTSPSKKSEAIERLGADSFLVSRDQDEMQAAMGTMDGIIDTVSAVHPLMPL  264 (361)
Q Consensus       185 ~~vlV~Gag~vG~~a~~la~~~g~~vi~~~~~~~~~~~~~~~~g~~~vv~~~~~~~~~~~~~g~d~vid~~g~~~~~~~~  264 (361)
                      .+|.|+|.|.+|...+..++..|.+|++.++++++.+.+ +++|+...  .+..+.+.....+.|+||-++.... +...
T Consensus         9 ~kIgIIG~G~mG~slA~~L~~~G~~V~~~dr~~~~~~~a-~~~G~~~~--~~~~e~~~~a~~~aDlVilavP~~~-~~~v   84 (341)
T 3ktd_A            9 RPVCILGLGLIGGSLLRDLHAANHSVFGYNRSRSGAKSA-VDEGFDVS--ADLEATLQRAAAEDALIVLAVPMTA-IDSL   84 (341)
T ss_dssp             SCEEEECCSHHHHHHHHHHHHTTCCEEEECSCHHHHHHH-HHTTCCEE--SCHHHHHHHHHHTTCEEEECSCHHH-HHHH
T ss_pred             CEEEEEeecHHHHHHHHHHHHCCCEEEEEeCCHHHHHHH-HHcCCeee--CCHHHHHHhcccCCCEEEEeCCHHH-HHHH
Confidence            569999999999999999999999999999988776655 67887432  1112333333346799999888543 3332


Q ss_pred             Hh---ccccCCEEEEecCC
Q 018067          265 IG---LLKSQGKLVLVGAP  280 (361)
Q Consensus       265 ~~---~l~~~G~~v~~g~~  280 (361)
                      ++   -++++..++.++..
T Consensus        85 l~~l~~~~~~~iv~Dv~Sv  103 (341)
T 3ktd_A           85 LDAVHTHAPNNGFTDVVSV  103 (341)
T ss_dssp             HHHHHHHCTTCCEEECCSC
T ss_pred             HHHHHccCCCCEEEEcCCC
Confidence            22   23556666666654

>4had_A Probable oxidoreductase protein; structural genomics, protein structure initiative, nysgrc, PSI-biology; 2.00A {Rhizobium etli}

Probab=95.62  E-value=0.12  Score=46.77  Aligned_cols=130  Identities=18%  Similarity=0.216  Sum_probs=80.7

Q ss_pred             EEEEEcCChHHHH-HHHHHHHc-CCeEEEEeC-CchhHHHHHHHcCCCEEecCCCHHHHHHhcCCccEEEEcCCCcccHH
Q 018067          186 HVGVVGLGGLGHV-AVKFAKAM-GVKVTVIST-SPSKKSEAIERLGADSFLVSRDQDEMQAAMGTMDGIIDTVSAVHPLM  262 (361)
Q Consensus       186 ~vlV~Gag~vG~~-a~~la~~~-g~~vi~~~~-~~~~~~~~~~~~g~~~vv~~~~~~~~~~~~~g~d~vid~~g~~~~~~  262 (361)
                      ++.|+|+|.+|.. .+..++.. +++++.+++ +.++.+++++++|...++  .+.+.+.+ ...+|+|+-++....=..
T Consensus        25 rigiIG~G~ig~~~~~~~~~~~~~~~lvav~d~~~~~a~~~a~~~g~~~~y--~d~~ell~-~~~iDaV~I~tP~~~H~~  101 (350)
T 4had_A           25 RFGIISTAKIGRDNVVPAIQDAENCVVTAIASRDLTRAREMADRFSVPHAF--GSYEEMLA-SDVIDAVYIPLPTSQHIE  101 (350)
T ss_dssp             EEEEESCCHHHHHTHHHHHHHCSSEEEEEEECSSHHHHHHHHHHHTCSEEE--SSHHHHHH-CSSCSEEEECSCGGGHHH
T ss_pred             EEEEEcChHHHHHHHHHHHHhCCCeEEEEEECCCHHHHHHHHHHcCCCeee--CCHHHHhc-CCCCCEEEEeCCCchhHH
Confidence            6999999999975 35555554 778886655 556677888899976553  33222211 247999999888754356


Q ss_pred             HHHhccccCCEEEEecCCCCCcccChH---HH---H-hCCc-EEEecccCCHHHHHHHHHHHHcCCCc
Q 018067          263 PLIGLLKSQGKLVLVGAPEKPLELPAF---SL---L-MGRK-IVGGSMIGGMKETQEMIDFAAKHNIR  322 (361)
Q Consensus       263 ~~~~~l~~~G~~v~~g~~~~~~~~~~~---~~---~-~~~~-~i~g~~~~~~~~~~~~~~ll~~~~~~  322 (361)
                      .+..+++. |+-|++.-+   +..+..   .+   . .+++ ...+........++.+-+++++|.+-
T Consensus       102 ~~~~al~a-GkhVl~EKP---la~~~~ea~~l~~~a~~~~~~l~v~~~~R~~p~~~~~k~~i~~G~iG  165 (350)
T 4had_A          102 WSIKAADA-GKHVVCEKP---LALKAGDIDAVIAARDRNKVVVTEAYMITYSPVWQKVRSLIDEGAIG  165 (350)
T ss_dssp             HHHHHHHT-TCEEEECSC---CCSSGGGGHHHHHHHHHHTCCEEECCGGGGSHHHHHHHHHHHTTTTS
T ss_pred             HHHHHHhc-CCEEEEeCC---cccchhhHHHHHHHHHHcCCceeEeeeeecCHHHHHhhHhhhcCCCC
Confidence            67777765 566777543   322222   11   1 1233 33444444445677888888888774

>4fb5_A Probable oxidoreductase protein; PSI-biology, nysgrc, structural genomics, NEW YORK structura genomics research consortium, GFO/IDH/MOCA family; 2.61A {Rhizobium etli}

Probab=95.61  E-value=0.17  Score=46.49  Aligned_cols=133  Identities=15%  Similarity=0.117  Sum_probs=77.7

Q ss_pred             CEEEEEcCChHHHHHHHHHHHc--------CCeEEEEeC-CchhHHHHHHHcCCCEEecCCCHHHHHHhcCCccEEEEcC
Q 018067          185 MHVGVVGLGGLGHVAVKFAKAM--------GVKVTVIST-SPSKKSEAIERLGADSFLVSRDQDEMQAAMGTMDGIIDTV  255 (361)
Q Consensus       185 ~~vlV~Gag~vG~~a~~la~~~--------g~~vi~~~~-~~~~~~~~~~~~g~~~vv~~~~~~~~~~~~~g~d~vid~~  255 (361)
                      =+|.|+|+|.+|...+..++..        +++++.+++ ++++.+.+++++|...++  .+.+.+.+ ...+|+|+-++
T Consensus        26 irvgiIG~G~ig~~H~~a~~~~~~~~~~~~~~~lvav~d~~~~~a~~~a~~~g~~~~y--~d~~ell~-~~~iDaV~Iat  102 (393)
T 4fb5_A           26 LGIGLIGTGYMGKCHALAWNAVKTVFGDVERPRLVHLAEANAGLAEARAGEFGFEKAT--ADWRALIA-DPEVDVVSVTT  102 (393)
T ss_dssp             CEEEEECCSHHHHHHHHHHTTHHHHHCSSCCCEEEEEECC--TTHHHHHHHHTCSEEE--SCHHHHHH-CTTCCEEEECS
T ss_pred             ccEEEEcCCHHHHHHHHHHHhhhhhhccCCCcEEEEEECCCHHHHHHHHHHhCCCeec--CCHHHHhc-CCCCcEEEECC
Confidence            4699999999998766544332        567776665 456677888899986553  33222211 24799999888


Q ss_pred             CCcccHHHHHhccccCCEEEEecCCCCCcccChHHH-------HhCCcE-EEecccCCHHHHHHHHHHHHcCCCcee
Q 018067          256 SAVHPLMPLIGLLKSQGKLVLVGAPEKPLELPAFSL-------LMGRKI-VGGSMIGGMKETQEMIDFAAKHNIRAD  324 (361)
Q Consensus       256 g~~~~~~~~~~~l~~~G~~v~~g~~~~~~~~~~~~~-------~~~~~~-i~g~~~~~~~~~~~~~~ll~~~~~~~~  324 (361)
                      ....=...+..+++. |+-|++.   +++..+..+.       -.+++. ..+........++.+-+++++|.+-..
T Consensus       103 P~~~H~~~a~~al~a-GkhVl~E---KPla~~~~ea~~l~~~a~~~g~~l~vg~~~R~~p~~~~~k~~i~~G~iG~i  175 (393)
T 4fb5_A          103 PNQFHAEMAIAALEA-GKHVWCE---KPMAPAYADAERMLATAERSGKVAALGYNYIQNPVMRHIRKLVGDGVIGRV  175 (393)
T ss_dssp             CGGGHHHHHHHHHHT-TCEEEEC---SCSCSSHHHHHHHHHHHHHSSSCEEECCGGGGCHHHHHHHHHHHTTTTCSE
T ss_pred             ChHHHHHHHHHHHhc-CCeEEEc---cCCcccHHHHHHhhhhHHhcCCccccccccccChHHHHHHHHHHcCCCccc
Confidence            875435666666665 6667774   3444433321       112222 333333333456666677777766543

>1pjz_A Thiopurine S-methyltransferase; polymorphism, S-adenosylmethionine, drug metabolism; NMR {Pseudomonas syringae PV} SCOP: c.66.1.36

Probab=95.61  E-value=0.014  Score=48.81  Aligned_cols=94  Identities=16%  Similarity=0.131  Sum_probs=59.4

Q ss_pred             CCCCCEEEEEcCChHHHHHHHHHHHcCCeEEEEeCCchhHHHHHHHcCC----------------C-EEecCCCHHHHHH
Q 018067          181 DKPGMHVGVVGLGGLGHVAVKFAKAMGVKVTVISTSPSKKSEAIERLGA----------------D-SFLVSRDQDEMQA  243 (361)
Q Consensus       181 ~~~g~~vlV~Gag~vG~~a~~la~~~g~~vi~~~~~~~~~~~~~~~~g~----------------~-~vv~~~~~~~~~~  243 (361)
                      +.++.+||.+|+|. |..+..+++. |++|+.++-+++..+.+.++.+.                + .++..+-.+ +..
T Consensus        20 ~~~~~~vLD~GCG~-G~~~~~la~~-g~~V~gvD~S~~~l~~a~~~~~~~~~~~~~~~~~~~~~~~v~~~~~d~~~-l~~   96 (203)
T 1pjz_A           20 VVPGARVLVPLCGK-SQDMSWLSGQ-GYHVVGAELSEAAVERYFTERGEQPHITSQGDFKVYAAPGIEIWCGDFFA-LTA   96 (203)
T ss_dssp             CCTTCEEEETTTCC-SHHHHHHHHH-CCEEEEEEECHHHHHHHHHHHCSCSEEEEETTEEEEECSSSEEEEECCSS-STH
T ss_pred             cCCCCEEEEeCCCC-cHhHHHHHHC-CCeEEEEeCCHHHHHHHHHHccCCcccccccccccccCCccEEEECcccc-CCc
Confidence            57889999999864 6677777776 89999999998877666555331                1 111111101 111


Q ss_pred             h-cCCccEEEEcCCCc--------ccHHHHHhccccCCEEEEe
Q 018067          244 A-MGTMDGIIDTVSAV--------HPLMPLIGLLKSQGKLVLV  277 (361)
Q Consensus       244 ~-~~g~d~vid~~g~~--------~~~~~~~~~l~~~G~~v~~  277 (361)
                      . .+.||+|++...-.        ..+..+.+.|+|+|+++.+
T Consensus        97 ~~~~~fD~v~~~~~l~~l~~~~~~~~l~~~~r~LkpgG~~~l~  139 (203)
T 1pjz_A           97 RDIGHCAAFYDRAAMIALPADMRERYVQHLEALMPQACSGLLI  139 (203)
T ss_dssp             HHHHSEEEEEEESCGGGSCHHHHHHHHHHHHHHSCSEEEEEEE
T ss_pred             ccCCCEEEEEECcchhhCCHHHHHHHHHHHHHHcCCCcEEEEE
Confidence            1 14699999743211        1356688899999994433

>2yq5_A D-isomer specific 2-hydroxyacid dehydrogenase; oxidoreductase; HET: NAD; 2.75A {Lactobacillus delbrueckii subsp} PDB: 2yq4_A*

Probab=95.59  E-value=0.026  Score=51.25  Aligned_cols=86  Identities=16%  Similarity=0.174  Sum_probs=61.7

Q ss_pred             CCCEEEEEcCChHHHHHHHHHHHcCCeEEEEeCCchhHHHHHHHcCCCEEecCCCHHHHHHhcCCccEEEEcCCCc----
Q 018067          183 PGMHVGVVGLGGLGHVAVKFAKAMGVKVTVISTSPSKKSEAIERLGADSFLVSRDQDEMQAAMGTMDGIIDTVSAV----  258 (361)
Q Consensus       183 ~g~~vlV~Gag~vG~~a~~la~~~g~~vi~~~~~~~~~~~~~~~~g~~~vv~~~~~~~~~~~~~g~d~vid~~g~~----  258 (361)
                      .|++|.|+|.|.+|..+++.++.+|++|++.+++.+..  .  ..+...    .+   +.++....|+|+-++...    
T Consensus       147 ~gktvgIiGlG~IG~~vA~~l~~~G~~V~~~d~~~~~~--~--~~~~~~----~~---l~ell~~aDvV~l~~Plt~~t~  215 (343)
T 2yq5_A          147 YNLTVGLIGVGHIGSAVAEIFSAMGAKVIAYDVAYNPE--F--EPFLTY----TD---FDTVLKEADIVSLHTPLFPSTE  215 (343)
T ss_dssp             GGSEEEEECCSHHHHHHHHHHHHTTCEEEEECSSCCGG--G--TTTCEE----CC---HHHHHHHCSEEEECCCCCTTTT
T ss_pred             CCCeEEEEecCHHHHHHHHHHhhCCCEEEEECCChhhh--h--hccccc----cC---HHHHHhcCCEEEEcCCCCHHHH
Confidence            58899999999999999999999999999999876531  1  112211    12   233334689998887632    


Q ss_pred             -ccHHHHHhccccCCEEEEecC
Q 018067          259 -HPLMPLIGLLKSQGKLVLVGA  279 (361)
Q Consensus       259 -~~~~~~~~~l~~~G~~v~~g~  279 (361)
                       ..-...+..++++..+|.++.
T Consensus       216 ~li~~~~l~~mk~gailIN~aR  237 (343)
T 2yq5_A          216 NMIGEKQLKEMKKSAYLINCAR  237 (343)
T ss_dssp             TCBCHHHHHHSCTTCEEEECSC
T ss_pred             HHhhHHHHhhCCCCcEEEECCC
Confidence             112456788899999999874

>3qha_A Putative oxidoreductase; seattle structural genomics center for infectious disease, S mycobacterium avium 104, rossmann fold; 2.25A {Mycobacterium avium}

Probab=95.58  E-value=0.035  Score=49.29  Aligned_cols=88  Identities=19%  Similarity=0.171  Sum_probs=62.9

Q ss_pred             CEEEEEcCChHHHHHHHHHHHcCCeEEEEeCCchhHHHHHHHcCCCEEecCCCHHHHHHhcCCccEEEEcCCCcccHH--
Q 018067          185 MHVGVVGLGGLGHVAVKFAKAMGVKVTVISTSPSKKSEAIERLGADSFLVSRDQDEMQAAMGTMDGIIDTVSAVHPLM--  262 (361)
Q Consensus       185 ~~vlV~Gag~vG~~a~~la~~~g~~vi~~~~~~~~~~~~~~~~g~~~vv~~~~~~~~~~~~~g~d~vid~~g~~~~~~--  262 (361)
                      .+|.|+|.|.+|...+..+...|.+|++.++++++.+.+ .+.|+..   ..+   ..++.. .|+||-++..+..+.  
T Consensus        16 ~~I~vIG~G~mG~~~A~~l~~~G~~V~~~dr~~~~~~~~-~~~g~~~---~~~---~~~~~~-aDvvi~~vp~~~~~~~v   87 (296)
T 3qha_A           16 LKLGYIGLGNMGAPMATRMTEWPGGVTVYDIRIEAMTPL-AEAGATL---ADS---VADVAA-ADLIHITVLDDAQVREV   87 (296)
T ss_dssp             CCEEEECCSTTHHHHHHHHTTSTTCEEEECSSTTTSHHH-HHTTCEE---CSS---HHHHTT-SSEEEECCSSHHHHHHH
T ss_pred             CeEEEECcCHHHHHHHHHHHHCCCeEEEEeCCHHHHHHH-HHCCCEE---cCC---HHHHHh-CCEEEEECCChHHHHHH
Confidence            469999999999999999988999999999998887777 4456532   122   233445 899999998753233  


Q ss_pred             --HHHhccccCCEEEEecCC
Q 018067          263 --PLIGLLKSQGKLVLVGAP  280 (361)
Q Consensus       263 --~~~~~l~~~G~~v~~g~~  280 (361)
                        .....++++..++..+..
T Consensus        88 ~~~l~~~l~~g~ivv~~st~  107 (296)
T 3qha_A           88 VGELAGHAKPGTVIAIHSTI  107 (296)
T ss_dssp             HHHHHTTCCTTCEEEECSCC
T ss_pred             HHHHHHhcCCCCEEEEeCCC
Confidence              344456666777776543

>4b4u_A Bifunctional protein fold; oxidoreductase; HET: NAP; 1.45A {Acinetobacter baumannii atcc 19606} PDB: 4b4v_A* 4b4w_A*

Probab=95.56  E-value=0.083  Score=46.55  Aligned_cols=96  Identities=19%  Similarity=0.162  Sum_probs=74.7

Q ss_pred             cccchhhhhhhhHhhhcCCCCCCCEEEEEcC-ChHHHHHHHHHHHcCCeEEEEeCCchhHHHHHHHcCCCEEecCCCHHH
Q 018067          162 APLLCAGITVYSPLRFYGLDKPGMHVGVVGL-GGLGHVAVKFAKAMGVKVTVISTSPSKKSEAIERLGADSFLVSRDQDE  240 (361)
Q Consensus       162 a~l~~~~~ta~~~l~~~~~~~~g~~vlV~Ga-g~vG~~a~~la~~~g~~vi~~~~~~~~~~~~~~~~g~~~vv~~~~~~~  240 (361)
                      ..+||+.......|++..---.|++++|+|- ..+|.=.+.++...+++|++..+....+.+.                 
T Consensus       157 ~~~PcTp~gv~~lL~~~~i~l~Gk~vvViGRS~iVGkPla~LL~~~~ATVTi~Hs~T~dl~~~-----------------  219 (303)
T 4b4u_A          157 AYGSATPAGIMTILKENNIEIAGKHAVVVGRSAILGKPMAMMLLQANATVTICHSRTQNLPEL-----------------  219 (303)
T ss_dssp             CCCCHHHHHHHHHHHHTTCCCTTCEEEEECCCTTTHHHHHHHHHHTTCEEEEECTTCSSHHHH-----------------
T ss_pred             cccCccHHHHHHHHHHHCCCCCCCEEEEEeccccccchHHHHHHhcCCEEEEecCCCCCHHHH-----------------
Confidence            4567777777888887775568999999996 8899999999999999998776654433333                 


Q ss_pred             HHHhcCCccEEEEcCCCcccHHHHHhccccCCEEEEecCC
Q 018067          241 MQAAMGTMDGIIDTVSAVHPLMPLIGLLKSQGKLVLVGAP  280 (361)
Q Consensus       241 ~~~~~~g~d~vid~~g~~~~~~~~~~~l~~~G~~v~~g~~  280 (361)
                          ...+|+++-++|.+..+.  -+++++|..++.+|..
T Consensus       220 ----~~~ADIvV~A~G~p~~i~--~d~vk~GavVIDVGin  253 (303)
T 4b4u_A          220 ----VKQADIIVGAVGKAELIQ--KDWIKQGAVVVDAGFH  253 (303)
T ss_dssp             ----HHTCSEEEECSCSTTCBC--GGGSCTTCEEEECCCB
T ss_pred             ----hhcCCeEEeccCCCCccc--cccccCCCEEEEecee
Confidence                335799999999877333  4578999999999974

>3e9n_A Putative short-chain dehydrogenase/reductase; structural genomics, unknown function, oxidoreductase, PSI- 2; 2.40A {Corynebacterium glutamicum}

Probab=95.55  E-value=0.034  Score=47.69  Aligned_cols=73  Identities=16%  Similarity=0.177  Sum_probs=45.8

Q ss_pred             CCCEEEEEcC-ChHHHHHHHHHHHcCCeEEEEeCCchhHHHHHHHcCCCEEecCC--CHHHHH---H-h--cCCccEEEE
Q 018067          183 PGMHVGVVGL-GGLGHVAVKFAKAMGVKVTVISTSPSKKSEAIERLGADSFLVSR--DQDEMQ---A-A--MGTMDGIID  253 (361)
Q Consensus       183 ~g~~vlV~Ga-g~vG~~a~~la~~~g~~vi~~~~~~~~~~~~~~~~g~~~vv~~~--~~~~~~---~-~--~~g~d~vid  253 (361)
                      .++++||.|+ |++|.++++.+.. |.+|++++++.++...+.+ ......+..+  +.+...   + +  .+++|++|+
T Consensus         4 ~~k~vlITGas~gIG~~~a~~l~~-g~~v~~~~r~~~~~~~~~~-~~~~~~~~~D~~~~~~~~~~~~~~~~~~~id~lv~   81 (245)
T 3e9n_A            4 KKKIAVVTGATGGMGIEIVKDLSR-DHIVYALGRNPEHLAALAE-IEGVEPIESDIVKEVLEEGGVDKLKNLDHVDTLVH   81 (245)
T ss_dssp             --CEEEEESTTSHHHHHHHHHHTT-TSEEEEEESCHHHHHHHHT-STTEEEEECCHHHHHHTSSSCGGGTTCSCCSEEEE
T ss_pred             CCCEEEEEcCCCHHHHHHHHHHhC-CCeEEEEeCCHHHHHHHHh-hcCCcceecccchHHHHHHHHHHHHhcCCCCEEEE
Confidence            4688999997 9999999888866 8999999998887766643 2211122111  111100   0 1  137999999


Q ss_pred             cCCC
Q 018067          254 TVSA  257 (361)
Q Consensus       254 ~~g~  257 (361)
                      ++|.
T Consensus        82 ~Ag~   85 (245)
T 3e9n_A           82 AAAV   85 (245)
T ss_dssp             CC--
T ss_pred             CCCc
Confidence            9985

>2z5l_A Tylkr1, tylactone synthase starter module and modules 1 & 2; short-chain dehydrogenase/reductase, rossman fold; 1.95A {Streptomyces fradiae}

Probab=95.55  E-value=0.053  Score=52.14  Aligned_cols=77  Identities=17%  Similarity=0.204  Sum_probs=54.5

Q ss_pred             CCCCCEEEEEcC-ChHHHHHHHHHHHcCC-eEEEEeCCch---hHHHHH---HHcCCCE---EecCCCHHHHHHhc--CC
Q 018067          181 DKPGMHVGVVGL-GGLGHVAVKFAKAMGV-KVTVISTSPS---KKSEAI---ERLGADS---FLVSRDQDEMQAAM--GT  247 (361)
Q Consensus       181 ~~~g~~vlV~Ga-g~vG~~a~~la~~~g~-~vi~~~~~~~---~~~~~~---~~~g~~~---vv~~~~~~~~~~~~--~g  247 (361)
                      ++++.++||.|+ |++|..++..+...|+ +|+++.++..   +..++.   +..|...   ..|-.+.+.+.++.  +.
T Consensus       256 ~~~~~~vLITGgtGgIG~~lA~~La~~G~~~vvl~~R~~~~~~~~~~l~~~l~~~g~~v~~~~~Dvtd~~~v~~~~~~~~  335 (511)
T 2z5l_A          256 WQPSGTVLITGGMGAIGRRLARRLAAEGAERLVLTSRRGPEAPGAAELAEELRGHGCEVVHAACDVAERDALAALVTAYP  335 (511)
T ss_dssp             CCCCSEEEEETTTSHHHHHHHHHHHHTTCSEEEEEESSGGGSTTHHHHHHHHHTTTCEEEEEECCSSCHHHHHHHHHHSC
T ss_pred             cCCCCEEEEECCCCHHHHHHHHHHHhCCCcEEEEEecCCcccHHHHHHHHHHHhcCCEEEEEEeCCCCHHHHHHHHhcCC
Confidence            568899999997 9999999999988999 6888888753   222332   3345432   23556666555543  46


Q ss_pred             ccEEEEcCCC
Q 018067          248 MDGIIDTVSA  257 (361)
Q Consensus       248 ~d~vid~~g~  257 (361)
                      +|+||+++|.
T Consensus       336 ld~VVh~AGv  345 (511)
T 2z5l_A          336 PNAVFHTAGI  345 (511)
T ss_dssp             CSEEEECCCC
T ss_pred             CcEEEECCcc
Confidence            9999999985

>1u8f_O GAPDH, glyceraldehyde-3-phosphate dehydrogenase, liver; rossmann fold, oxidoreductase, mammalian GAPDH; HET: NAD; 1.75A {Homo sapiens} SCOP: c.2.1.3 d.81.1.1 PDB: 1znq_O* 1j0x_O* 3gpd_R* 1dss_G* 1crw_G* 1szj_G* 1ihx_A* 1ihy_A* 1gpd_G* 4gpd_1

Probab=95.54  E-value=0.075  Score=48.05  Aligned_cols=95  Identities=17%  Similarity=0.279  Sum_probs=62.1

Q ss_pred             EEEEEcCChHHHHHHHHHHHc-CCeEEEEeCC---chhHHHHHH------HcCCC-------EE--------ecCCCHHH
Q 018067          186 HVGVVGLGGLGHVAVKFAKAM-GVKVTVISTS---PSKKSEAIE------RLGAD-------SF--------LVSRDQDE  240 (361)
Q Consensus       186 ~vlV~Gag~vG~~a~~la~~~-g~~vi~~~~~---~~~~~~~~~------~~g~~-------~v--------v~~~~~~~  240 (361)
                      +|.|+|.|-+|...++++... +.+++.+.+.   .+....+.+      +|...       ..        +...+++.
T Consensus         5 kVgI~G~G~iGr~~~R~l~~~~~vevvaI~d~~~~~~~~a~l~~~ds~~g~~~~~~~~~~~~l~v~g~~i~v~~~~d~~~   84 (335)
T 1u8f_O            5 KVGVNGFGRIGRLVTRAAFNSGKVDIVAINDPFIDLNYMVYMFQYDSTHGKFHGTVKAENGKLVINGNPITIFQERDPSK   84 (335)
T ss_dssp             EEEEECCSHHHHHHHHHHHHHCSSEEEEEECSSSCHHHHHHHHHCCTTTCSCSSCEEEETTEEEETTEEEEEECCSSGGG
T ss_pred             EEEEEccCHHHHHHHHHHHcCCCcEEEEecCCCCCHHHHHHHhhcccccCCCCCceEEcCCeEEECCeEEEEEecCCHHH
Confidence            689999999999999887654 6788887763   333333332      12111       11        11223332


Q ss_pred             HHHhcCCccEEEEcCCCcccHHHHHhccccCCEEEEecCC
Q 018067          241 MQAAMGTMDGIIDTVSAVHPLMPLIGLLKSQGKLVLVGAP  280 (361)
Q Consensus       241 ~~~~~~g~d~vid~~g~~~~~~~~~~~l~~~G~~v~~g~~  280 (361)
                      +.....++|+||+|+|.....+.+..+++.|-+.|.+..+
T Consensus        85 l~~~~~~vDvV~eatg~~~~~e~a~~~l~aGak~V~iSap  124 (335)
T 1u8f_O           85 IKWGDAGAEYVVESTGVFTTMEKAGAHLQGGAKRVIISAP  124 (335)
T ss_dssp             CCTTTTTCCEEEECSSSCCSHHHHGGGGGGTCSEEEESSC
T ss_pred             CccccCCCCEEEECCCchhhHHHHHHHHhCCCeEEEeccC
Confidence            2111248999999999987778888888887688888754

>1g8a_A Fibrillarin-like PRE-rRNA processing protein; rRNA binding, RNA binding, structural genomics, BSGC structure funded by NIH; 1.40A {Pyrococcus horikoshii} SCOP: c.66.1.3 PDB: 2nnw_B 3nmu_F* 3nvk_I* 3nvm_B 1pry_A

Probab=95.53  E-value=0.049  Score=46.01  Aligned_cols=96  Identities=22%  Similarity=0.250  Sum_probs=62.3

Q ss_pred             CCCCCEEEEEcCChHHHHHHHHHHHcC--CeEEEEeCCchhHHHHHHHcC--CC-EEecC--CCHHHHHHhcCCccEEEE
Q 018067          181 DKPGMHVGVVGLGGLGHVAVKFAKAMG--VKVTVISTSPSKKSEAIERLG--AD-SFLVS--RDQDEMQAAMGTMDGIID  253 (361)
Q Consensus       181 ~~~g~~vlV~Gag~vG~~a~~la~~~g--~~vi~~~~~~~~~~~~~~~~g--~~-~vv~~--~~~~~~~~~~~g~d~vid  253 (361)
                      ++++++||-+|+|. |..+..+++..|  .+|+.++.+++....+.+...  .+ .++..  .+........+.+|+|+-
T Consensus        71 ~~~~~~vLDlG~G~-G~~~~~la~~~~~~~~v~~vD~s~~~~~~~~~~~~~~~~v~~~~~d~~~~~~~~~~~~~~D~v~~  149 (227)
T 1g8a_A           71 IKPGKSVLYLGIAS-GTTASHVSDIVGWEGKIFGIEFSPRVLRELVPIVEERRNIVPILGDATKPEEYRALVPKVDVIFE  149 (227)
T ss_dssp             CCTTCEEEEETTTS-TTHHHHHHHHHCTTSEEEEEESCHHHHHHHHHHHSSCTTEEEEECCTTCGGGGTTTCCCEEEEEE
T ss_pred             CCCCCEEEEEeccC-CHHHHHHHHHhCCCeEEEEEECCHHHHHHHHHHHhccCCCEEEEccCCCcchhhcccCCceEEEE
Confidence            67899999999876 888888888764  699999988865444433221  11 12211  111111122347999986


Q ss_pred             cCCCcc---c-HHHHHhccccCCEEEEe
Q 018067          254 TVSAVH---P-LMPLIGLLKSQGKLVLV  277 (361)
Q Consensus       254 ~~g~~~---~-~~~~~~~l~~~G~~v~~  277 (361)
                      ....+.   . +..+.+.|+++|.++..
T Consensus       150 ~~~~~~~~~~~l~~~~~~LkpgG~l~~~  177 (227)
T 1g8a_A          150 DVAQPTQAKILIDNAEVYLKRGGYGMIA  177 (227)
T ss_dssp             CCCSTTHHHHHHHHHHHHEEEEEEEEEE
T ss_pred             CCCCHhHHHHHHHHHHHhcCCCCEEEEE
Confidence            655432   2 66788999999999887

>2cuk_A Glycerate dehydrogenase/glyoxylate reductase; structural genomics, riken structur genomics/proteomics initiative, RSGI, NPPSFA; HET: NHE; 2.00A {Thermus thermophilus}

Probab=95.51  E-value=0.021  Score=51.15  Aligned_cols=84  Identities=19%  Similarity=0.245  Sum_probs=55.2

Q ss_pred             CCCCEEEEEcCChHHHHHHHHHHHcCCeEEEEeCCchhHHHHHHHcCCCEEecCCCHHHHHHhcCCccEEEEcCCCcc--
Q 018067          182 KPGMHVGVVGLGGLGHVAVKFAKAMGVKVTVISTSPSKKSEAIERLGADSFLVSRDQDEMQAAMGTMDGIIDTVSAVH--  259 (361)
Q Consensus       182 ~~g~~vlV~Gag~vG~~a~~la~~~g~~vi~~~~~~~~~~~~~~~~g~~~vv~~~~~~~~~~~~~g~d~vid~~g~~~--  259 (361)
                      -.|.+|.|+|.|.+|...++.++.+|.+|++.+++.++..       +    ...+   +.++....|+|+-++....  
T Consensus       142 l~g~~vgIIG~G~IG~~~A~~l~~~G~~V~~~d~~~~~~~-------~----~~~~---l~ell~~aDvV~l~~p~~~~t  207 (311)
T 2cuk_A          142 LQGLTLGLVGMGRIGQAVAKRALAFGMRVVYHARTPKPLP-------Y----PFLS---LEELLKEADVVSLHTPLTPET  207 (311)
T ss_dssp             CTTCEEEEECCSHHHHHHHHHHHHTTCEEEEECSSCCSSS-------S----CBCC---HHHHHHHCSEEEECCCCCTTT
T ss_pred             CCCCEEEEEEECHHHHHHHHHHHHCCCEEEEECCCCcccc-------c----ccCC---HHHHHhhCCEEEEeCCCChHH
Confidence            4688999999999999999999999999999988765421       1    1111   1222234677776654321  


Q ss_pred             --cH-HHHHhccccCCEEEEecC
Q 018067          260 --PL-MPLIGLLKSQGKLVLVGA  279 (361)
Q Consensus       260 --~~-~~~~~~l~~~G~~v~~g~  279 (361)
                        .+ ...+..++++..++.++.
T Consensus       208 ~~li~~~~l~~mk~ga~lin~sr  230 (311)
T 2cuk_A          208 HRLLNRERLFAMKRGAILLNTAR  230 (311)
T ss_dssp             TTCBCHHHHTTSCTTCEEEECSC
T ss_pred             HhhcCHHHHhhCCCCcEEEECCC
Confidence              11 235556677777776664

>4g65_A TRK system potassium uptake protein TRKA; structural genomics, center for structural genomics of infec diseases, csgid, niaid; HET: MSE; 2.09A {Vibrio vulnificus}

Probab=95.48  E-value=0.04  Score=52.23  Aligned_cols=75  Identities=12%  Similarity=0.177  Sum_probs=61.8

Q ss_pred             CEEEEEcCChHHHHHHHHHHHcCCeEEEEeCCchhHHHHHHHcCCCEEe-cCCCHHHHHHhc-CCccEEEEcCCCcc
Q 018067          185 MHVGVVGLGGLGHVAVKFAKAMGVKVTVISTSPSKKSEAIERLGADSFL-VSRDQDEMQAAM-GTMDGIIDTVSAVH  259 (361)
Q Consensus       185 ~~vlV~Gag~vG~~a~~la~~~g~~vi~~~~~~~~~~~~~~~~g~~~vv-~~~~~~~~~~~~-~g~d~vid~~g~~~  259 (361)
                      -+|+|.|+|.+|...++.+...|..|++++.++++.+.+.++++...+. |..+++.++++. ..+|+++-+++++.
T Consensus         4 M~iiI~G~G~vG~~la~~L~~~~~~v~vId~d~~~~~~~~~~~~~~~i~Gd~~~~~~L~~Agi~~ad~~ia~t~~De   80 (461)
T 4g65_A            4 MKIIILGAGQVGGTLAENLVGENNDITIVDKDGDRLRELQDKYDLRVVNGHASHPDVLHEAGAQDADMLVAVTNTDE   80 (461)
T ss_dssp             EEEEEECCSHHHHHHHHHTCSTTEEEEEEESCHHHHHHHHHHSSCEEEESCTTCHHHHHHHTTTTCSEEEECCSCHH
T ss_pred             CEEEEECCCHHHHHHHHHHHHCCCCEEEEECCHHHHHHHHHhcCcEEEEEcCCCHHHHHhcCCCcCCEEEEEcCChH
Confidence            4689999999999999999889999999999999988887788865443 455677777664 57999998888865

>2q1s_A Putative nucleotide sugar epimerase/ dehydratase; rossman fold, protein-NADH complex, sugar binding protein; HET: NAI; 1.50A {Bordetella bronchiseptica} PDB: 2pzj_A* 2q1t_A* 2q1u_A*

Probab=95.48  E-value=0.015  Score=53.52  Aligned_cols=76  Identities=18%  Similarity=0.120  Sum_probs=53.4

Q ss_pred             CCCEEEEEcC-ChHHHHHHHHHHHcC-CeEEEEeCCchhHHHHHH-HcCCCE-EecCCCHHHHHHhcCCccEEEEcCCCc
Q 018067          183 PGMHVGVVGL-GGLGHVAVKFAKAMG-VKVTVISTSPSKKSEAIE-RLGADS-FLVSRDQDEMQAAMGTMDGIIDTVSAV  258 (361)
Q Consensus       183 ~g~~vlV~Ga-g~vG~~a~~la~~~g-~~vi~~~~~~~~~~~~~~-~~g~~~-vv~~~~~~~~~~~~~g~d~vid~~g~~  258 (361)
                      .+.+|||+|+ |.+|..+++.+...| .+|+++++...+.....+ .-++.. ..|..+++.+.++..++|+||.+++..
T Consensus        31 ~~~~ilVtGatG~iG~~l~~~L~~~g~~~V~~~~r~~~~~~~~l~~~~~v~~~~~Dl~d~~~l~~~~~~~d~Vih~A~~~  110 (377)
T 2q1s_A           31 ANTNVMVVGGAGFVGSNLVKRLLELGVNQVHVVDNLLSAEKINVPDHPAVRFSETSITDDALLASLQDEYDYVFHLATYH  110 (377)
T ss_dssp             TTCEEEEETTTSHHHHHHHHHHHHTTCSEEEEECCCTTCCGGGSCCCTTEEEECSCTTCHHHHHHCCSCCSEEEECCCCS
T ss_pred             CCCEEEEECCccHHHHHHHHHHHHcCCceEEEEECCCCCchhhccCCCceEEEECCCCCHHHHHHHhhCCCEEEECCCcc
Confidence            3568999998 999999999999999 999999887543211100 001111 124456677777777999999999864

---

Homologous Structure Domains

Structure Domains Detected by RPS-BLAST

Original result of RPS-BLAST against SCOP70(version1.75) database

ID	Length	Definition	E-value
Query	361
d1piwa1	192	b.35.1.2 (A:1-152,A:321-360) Cinnamyl alcohol dehy	4e-32
d1uufa2	168	c.2.1.1 (A:145-312) Hypothetical protein YahK {Esc	2e-28
d1piwa2	168	c.2.1.1 (A:153-320) Cinnamyl alcohol dehydrogenase	7e-28
d1uufa1	179	b.35.1.2 (A:3-144,A:313-349) Hypothetical protein	2e-22
d1cdoa1	199	b.35.1.2 (A:1-164,A:340-374) Alcohol dehydrogenase	7e-21
d2fzwa1	197	b.35.1.2 (A:1-162,A:339-373) Alcohol dehydrogenase	1e-20
d1llua2	166	c.2.1.1 (A:144-309) Alcohol dehydrogenase {Pseudom	2e-18
d1llua1	175	b.35.1.2 (A:2-143,A:310-342) Alcohol dehydrogenase	2e-18
d1e3ia1	202	b.35.1.2 (A:1-167,A:342-376) Alcohol dehydrogenase	7e-18
d1rjwa2	168	c.2.1.1 (A:138-305) Alcohol dehydrogenase {Bacillu	3e-17
d1vj0a2	182	c.2.1.1 (A:156-337) Hypothetical protein TM0436 {T	4e-17
d1kola1	201	b.35.1.2 (A:2-160,A:356-397) Formaldehyde dehydrog	5e-17
d1f8fa1	194	b.35.1.2 (A:4-162,A:337-371) Benzyl alcohol dehydr	3e-16
d1h2ba2	172	c.2.1.1 (A:155-326) Alcohol dehydrogenase {Archaeo	4e-16
d1f8fa2	174	c.2.1.1 (A:163-336) Benzyl alcohol dehydrogenase {	5e-16
d1e3ia2	174	c.2.1.1 (A:168-341) Alcohol dehydrogenase {Mouse (	5e-16
d1p0fa2	174	c.2.1.1 (A:1164-1337) Alcohol dehydrogenase {Frog	1e-15
d1rjwa1	171	b.35.1.2 (A:1-137,A:306-339) Alcohol dehydrogenase	7e-15
d1e3ja1	178	b.35.1.2 (A:4-142,A:313-351) Ketose reductase (sor	1e-14
d2jhfa2	176	c.2.1.1 (A:164-339) Alcohol dehydrogenase {Horse (	2e-14
d1cdoa2	175	c.2.1.1 (A:165-339) Alcohol dehydrogenase {Cod (Ga	7e-14
d1p0fa1	198	b.35.1.2 (A:1001-1163,A:1338-1372) Alcohol dehydro	7e-14
d1vj0a1	184	b.35.1.2 (A:2-155,A:338-367) Hypothetical protein	1e-13
d2fzwa2	176	c.2.1.1 (A:163-338) Alcohol dehydrogenase {Human (	3e-13
d1d1ta2	176	c.2.1.1 (A:163-338) Alcohol dehydrogenase {Human (	4e-13
d1pl8a1	185	b.35.1.2 (A:1-145,A:317-356) Ketose reductase (sor	8e-13
d2jhfa1	198	b.35.1.2 (A:1-163,A:340-374) Alcohol dehydrogenase	4e-12
d1h2ba1	171	b.35.1.2 (A:17-154,A:327-359) Alcohol dehydrogenas	7e-12
d1jvba2	170	c.2.1.1 (A:144-313) Alcohol dehydrogenase {Archaeo	8e-12
d1jqba1	177	b.35.1.2 (A:1001-1139,A:1314-1351) Bacterial secon	1e-11
d1jqba2	174	c.2.1.1 (A:1140-1313) Bacterial secondary alcohol	4e-11
d1jvba1	177	b.35.1.2 (A:1-143,A:314-347) Alcohol dehydrogenase	6e-11
d1iz0a2	171	c.2.1.1 (A:99-269) Quinone oxidoreductase {Thermus	9e-08
d1e3ja2	170	c.2.1.1 (A:143-312) Ketose reductase (sorbitol deh	5e-07
d1qora2	179	c.2.1.1 (A:113-291) Quinone oxidoreductase {Escher	3e-06
d1tt7a1	162	b.35.1.2 (A:2-127,A:295-330) Hypothetical protein	3e-06
d1pl8a2	171	c.2.1.1 (A:146-316) Ketose reductase (sorbitol deh	2e-05
d1yb5a2	174	c.2.1.1 (A:121-294) Quinone oxidoreductase {Human	2e-05
d1pqwa_	183	c.2.1.1 (A:) Putative enoyl reductase domain of po	5e-05
d1iz0a1	131	b.35.1.2 (A:1-98,A:270-302) Quinone oxidoreductase	1e-04
d1gu7a2	189	c.2.1.1 (A:161-349) 2,4-dienoyl-CoA reductase {Yea	7e-04
d1kola2	195	c.2.1.1 (A:161-355) Formaldehyde dehydrogenase {Ps	0.004
d1o89a1	146	b.35.1.2 (A:1-115,A:293-323) Hypothetical protein	0.004

>d1piwa1 b.35.1.2 (A:1-152,A:321-360) Cinnamyl alcohol dehydrogenase, ADH6 {Baker's yeast (Saccharomyces cerevisiae) [TaxId: 4932]} Length = 192

class: All beta proteins
fold: GroES-like
superfamily: GroES-like
family: Alcohol dehydrogenase-like, N-terminal domain
domain: Cinnamyl alcohol dehydrogenase, ADH6
species: Baker's yeast (Saccharomyces cerevisiae) [TaxId: 4932]

 Score =  117 bits (293), Expect = 4e-32
 Identities = 63/185 (34%), Positives = 95/185 (51%), Gaps = 6/185 (3%)

Query: 9   HPKNAFGWAAKDTSGVLSP--FHFSRRATGEKDVTFKVTHCGICHSDLHMIKNEWGNTIY 66
           +P+   G A +      +P    +  +   + D+  K+  CG+C SD+H     WGN   
Sbjct: 3   YPEKFEGIAIQSHEDWKNPKKTKYDPKPFYDHDIDIKIEACGVCGSDIHCAAGHWGNMKM 62

Query: 67  PIVPGHEIVGVVTEVGSKVSK-FKVGDKVGVGCMVGSCRSCDSCAIDLENYCPKVIMTYA 125
           P+V GHEIVG V ++G K +   KVG +VGVG  V SC  CD C  D E YC K + TY+
Sbjct: 63  PLVVGHEIVGKVVKLGPKSNSGLKVGQRVGVGAQVFSCLECDRCKNDNEPYCTKFVTTYS 122

Query: 126 NKYHDGTITYGGYSDIMVADEHFVVRIPEGTPLDATAPLLCAGI-TVYSPLRFYGLDKPG 184
             Y DG ++ GGY++ +   EHFVV IPE   ++   P+  AG+   +  +    + +  
Sbjct: 123 QPYEDGYVSQGGYANYVRVHEHFVVPIPENIWVET-LPVGEAGVHEAFERMEKGDV-RYR 180

Query: 185 MHVGV 189
             +  
Sbjct: 181 FTLVG 185

>d1uufa2 c.2.1.1 (A:145-312) Hypothetical protein YahK {Escherichia coli [TaxId: 562]} Length = 168

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Alcohol dehydrogenase-like, C-terminal domain
domain: Hypothetical protein YahK
species: Escherichia coli [TaxId: 562]

 Score =  106 bits (266), Expect = 2e-28
 Identities = 86/167 (51%), Positives = 108/167 (64%), Gaps = 3/167 (1%)

Query: 156 TPLDATAPLLCAGITVYSPLRFYGLDKPGMHVGVVGLGGLGHVAVKFAKAMGVKVTVIST 215
             L A APLLCAGIT YSPLR +    PG  VGVVG+GGLGH+ +K A AMG  V    T
Sbjct: 4   EQLAAVAPLLCAGITTYSPLRHWQA-GPGKKVGVVGIGGLGHMGIKLAHAMGAHVVAF-T 61

Query: 216 SPSKKSEAIERLGADSFLVSRDQDEMQAAMGTMDGIIDTVSAVHPLMPLIGLLKSQGKLV 275
           +   K EA + LGAD  + SR+ DEM A + + D I++TV+A H L     LLK  G + 
Sbjct: 62  TSEAKREAAKALGADEVVNSRNADEMAAHLKSFDFILNTVAAPHNLDDFTTLLKRDGTMT 121

Query: 276 LVGAPEKPLELP-AFSLLMGRKIVGGSMIGGMKETQEMIDFAAKHNI 321
           LVGAP  P + P  F+L+M R+ + GSMIGG+ ETQEM+DF A+H I
Sbjct: 122 LVGAPATPHKSPEVFNLIMKRRAIAGSMIGGIPETQEMLDFCAEHGI 168

>d1piwa2 c.2.1.1 (A:153-320) Cinnamyl alcohol dehydrogenase, ADH6 {Baker's yeast (Saccharomyces cerevisiae) [TaxId: 4932]} Length = 168

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Alcohol dehydrogenase-like, C-terminal domain
domain: Cinnamyl alcohol dehydrogenase, ADH6
species: Baker's yeast (Saccharomyces cerevisiae) [TaxId: 4932]

 Score =  105 bits (262), Expect = 7e-28
 Identities = 49/169 (28%), Positives = 87/169 (51%), Gaps = 5/169 (2%)

Query: 157 PLDATAPLLCAGITVYSPLRFYGLDKPGMHVGVVGLGGLGHVAVKFAKAMGVKVTVISTS 216
           P    APLLC G+TVYSPL   G   PG  VG+VGLGG+G +    +KAM    T + + 
Sbjct: 2   PSHLAAPLLCGGLTVYSPLVRNGC-GPGKKVGIVGLGGIGSMGTLISKAM-GAETYVISR 59

Query: 217 PSKKSEAIERLGADSFLVSRDQDEM-QAAMGTMDGIIDTVSAVHPLMP--LIGLLKSQGK 273
            S+K E   ++GAD ++ + ++ +  +    T D I+   S++  +    +   +K  G+
Sbjct: 60  SSRKREDAMKMGADHYIATLEEGDWGEKYFDTFDLIVVCASSLTDIDFNIMPKAMKVGGR 119

Query: 274 LVLVGAPEKPLELPAFSLLMGRKIVGGSMIGGMKETQEMIDFAAKHNIR 322
           +V +  PE+   L      +    +  S +G +KE  +++   ++ +I+
Sbjct: 120 IVSISIPEQHEMLSLKPYGLKAVSISYSALGSIKELNQLLKLVSEKDIK 168

>d1uufa1 b.35.1.2 (A:3-144,A:313-349) Hypothetical protein YahK {Escherichia coli [TaxId: 562]} Length = 179

class: All beta proteins
fold: GroES-like
superfamily: GroES-like
family: Alcohol dehydrogenase-like, N-terminal domain
domain: Hypothetical protein YahK
species: Escherichia coli [TaxId: 562]

 Score = 90.8 bits (224), Expect = 2e-22
 Identities = 65/158 (41%), Positives = 87/158 (55%), Gaps = 2/158 (1%)

Query: 17  AAKDTSGVLSPFHFSRRATGEKDVTFKVTHCGICHSDLHMIKNEWGNTIYPIVPGHEIVG 76
            A      L P   +RR  G  DV  ++ +CG+CHSDLH +++EW  T+YP VPGHEIVG
Sbjct: 5   GAYSAKQPLEPMDITRREPGPNDVKIEIAYCGVCHSDLHQVRSEWAGTVYPCVPGHEIVG 64

Query: 77  VVTEVGSKVSKFKVGDKVGVGCMVGSCRSCDSCAIDLENYCPKVIMTYANKYHDGT-ITY 135
            V  VG +V K+  GD VGVGC+V SC+ C+ C   LENYC  +  TY +   D    T 
Sbjct: 65  RVVAVGDQVEKYAPGDLVGVGCIVDSCKHCEECEDGLENYCDHMTGTYNSPTPDEPGHTL 124

Query: 136 GGYSDIMVADEHFVVRIPE-GTPLDATAPLLCAGITVY 172
           GGYS  +V  E +V+RI      +     +  A   + 
Sbjct: 125 GGYSQQIVVHERYVLRIRVADIEMIRADQINEAYERML 162

>d1cdoa1 b.35.1.2 (A:1-164,A:340-374) Alcohol dehydrogenase {Cod (Gadus callarias) [TaxId: 8053]} Length = 199

class: All beta proteins
fold: GroES-like
superfamily: GroES-like
family: Alcohol dehydrogenase-like, N-terminal domain
domain: Alcohol dehydrogenase
species: Cod (Gadus callarias) [TaxId: 8053]

 Score = 86.9 bits (214), Expect = 7e-21
 Identities = 35/166 (21%), Positives = 59/166 (35%), Gaps = 15/166 (9%)

Query: 36  GEKDVTFKVTHCGICHSDLHMIKNEWGNTIYPIVPGHEIVGVVTEVGSKVSKFKVGDKVG 95
              ++  K+   G+CH+DL+ +        +P+V GHE  G+V  VG  V++F+ G+KV 
Sbjct: 32  HANEIRIKIIATGVCHTDLYHLFEGKHKDGFPVVLGHEGAGIVESVGPGVTEFQPGEKV- 90

Query: 96  VGCMVGSCRSCDSCAIDLENYCPKVIMTYANKYHD--------------GTITYGGYSDI 141
           +   +  C  C  C     N C K     +                     +    +S  
Sbjct: 91  IPLFISQCGECRFCQSPKTNQCVKGWANESPDVMSPKETRFTCKGRKVLQFLGTSTFSQY 150

Query: 142 MVADEHFVVRIPEGTPLDATAPLLCAGITVYSPLRFYGLDKPGMHV 187
            V ++  V +I     LD          +V   +      K    V
Sbjct: 151 TVVNQIAVAKIDPSVKLDEFITHRMPLESVNDAIDLMKHGKCIRTV 196

>d2fzwa1 b.35.1.2 (A:1-162,A:339-373) Alcohol dehydrogenase {Human (Homo sapiens), different isozymes [TaxId: 9606]} Length = 197

class: All beta proteins
fold: GroES-like
superfamily: GroES-like
family: Alcohol dehydrogenase-like, N-terminal domain
domain: Alcohol dehydrogenase
species: Human (Homo sapiens), different isozymes [TaxId: 9606]

 Score = 86.5 bits (213), Expect = 1e-20
 Identities = 33/169 (19%), Positives = 57/169 (33%), Gaps = 18/169 (10%)

Query: 36  GEKDVTFKVTHCGICHSDLHMIKNEWGNTIYPIVPGHEIVGVVTEVGSKVSKFKVGDKVG 95
              +V  K+    +CH+D + +        +P++ GH   G+V  VG  V+K K GD V 
Sbjct: 30  KAHEVRIKIIATAVCHTDAYTLSGADPEGCFPVILGHLGAGIVESVGEGVTKLKAGDTV- 88

Query: 96  VGCMVGSCRSCDSCAIDLENYCPKVIMTYANKYHDGTITY--------------GGYSDI 141
           +   +  C  C  C     N C K+ +T          +                 +S+ 
Sbjct: 89  IPLYIPQCGECKFCLNPKTNLCQKIRVTQGKGLMPDGTSRFTCKGKTILHYMGTSTFSEY 148

Query: 142 MVADEHFVVRIPEGTPLDATAPLLCAGITVYSPLRFYGLDKPGMHVGVV 190
            V  +  V +I     +D       +   +        L   G  +  V
Sbjct: 149 TVVADISVAKIDPLIKVDEFVTHNLSFDEINKAFE---LMHSGKSIRTV 194

>d1llua2 c.2.1.1 (A:144-309) Alcohol dehydrogenase {Pseudomonas aeruginosa [TaxId: 287]} Length = 166

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Alcohol dehydrogenase-like, C-terminal domain
domain: Alcohol dehydrogenase
species: Pseudomonas aeruginosa [TaxId: 287]

 Score = 79.3 bits (194), Expect = 2e-18
 Identities = 55/165 (33%), Positives = 88/165 (53%), Gaps = 5/165 (3%)

Query: 157 PLDATAPLLCAGITVYSPLRFYGLDKPGMHVGVVGLGGLGHVAVKFAKAMGVKVTVISTS 216
                AP+LCAG+TVY  L+     +PG  V + G+GGLGHVAV++A+AMG+ V  I   
Sbjct: 2   EFAEIAPILCAGVTVYKGLKQTNA-RPGQWVAISGIGGLGHVAVQYARAMGLHVAAIDID 60

Query: 217 PSKKSEAIERLGADSFLVSRDQDEMQAAMGTMDG---IIDTVSAVHPLMPLIGLLKSQGK 273
            +K  E   +LGA   + +R +D ++A    + G   ++ T  +       IG+ +  G 
Sbjct: 61  DAKL-ELARKLGASLTVNARQEDPVEAIQRDIGGAHGVLVTAVSNSAFGQAIGMARRGGT 119

Query: 274 LVLVGAPEKPLELPAFSLLMGRKIVGGSMIGGMKETQEMIDFAAK 318
           + LVG P      P F +++    + GS++G   + QE +DFA +
Sbjct: 120 IALVGLPPGDFPTPIFDVVLKGLHIAGSIVGTRADLQEALDFAGE 164

>d1llua1 b.35.1.2 (A:2-143,A:310-342) Alcohol dehydrogenase {Pseudomonas aeruginosa [TaxId: 287]} Length = 175

class: All beta proteins
fold: GroES-like
superfamily: GroES-like
family: Alcohol dehydrogenase-like, N-terminal domain
domain: Alcohol dehydrogenase
species: Pseudomonas aeruginosa [TaxId: 287]

 Score = 79.6 bits (195), Expect = 2e-18
 Identities = 42/156 (26%), Positives = 67/156 (42%), Gaps = 10/156 (6%)

Query: 36  GEKDVTFKVTHCGICHSDLHMIKNEWG-NTIYPIVPGHEIVGVVTEVGSKVSKFKVGDKV 94
           G   V  K+   G+CH+DLH  + +W      P +PGHE VG V  VGS V++ K GD+V
Sbjct: 29  GPGQVLVKIEASGVCHTDLHAAEGDWPVKPPLPFIPGHEGVGYVAAVGSGVTRVKEGDRV 88

Query: 95  GVGCMVGSCRSCDSCAIDLENYCPKVIMTYANKYHDGTITYGGYSDIMVADEHFVVRIPE 154
           G+  +  +C  C+ C    E  C     T  +           Y++ ++AD ++V  +P+
Sbjct: 89  GIPWLYTACGCCEHCLTGWETLCESQQNTGYSVNGG-------YAEYVLADPNYVGILPK 141

Query: 155 GTPLDATAPLLCAGITVYSPLRFYGLDKPGMHVGVV 190
                     L     +   +R       G  V  +
Sbjct: 142 NVKATIHPGKLDDINQILDQMR--AGQIEGRIVLEM 175

>d1e3ia1 b.35.1.2 (A:1-167,A:342-376) Alcohol dehydrogenase {Mouse (Mus musculus), class II [TaxId: 10090]} Length = 202

class: All beta proteins
fold: GroES-like
superfamily: GroES-like
family: Alcohol dehydrogenase-like, N-terminal domain
domain: Alcohol dehydrogenase
species: Mouse (Mus musculus), class II [TaxId: 10090]

 Score = 78.8 bits (193), Expect = 7e-18
 Identities = 37/174 (21%), Positives = 63/174 (36%), Gaps = 23/174 (13%)

Query: 36  GEKDVTFKVTHCGICHSDLHMIKNEWGNTIYPIVPGHEIVGVVTEVGSKVSKFKVGDKVG 95
              +V  +V    +C +D++    +    ++P+V GHE  G+V  VG  V+ FK GDKV 
Sbjct: 32  KACEVRIQVIATCVCPTDINATDPKK-KALFPVVLGHECAGIVESVGPGVTNFKPGDKV- 89

Query: 96  VGCMVGSCRSCDSCAIDLENYCPKV------------------IMTYANKYHDGTITYGG 137
           +      C+ C  C   L N C K+                    T   +     +    
Sbjct: 90  IPFFAPQCKRCKLCLSPLTNLCGKLRNFKYPTIDQELMEDRTSRFTCKGRSIYHFMGVSS 149

Query: 138 YSDIMVADEHFVVRIPEGTPLDATAPLLCAGITVYSPLRFYGLDKPGMHVGVVG 191
           +S   V  E  + R+ +   LD          ++   +    L K G  +  + 
Sbjct: 150 FSQYTVVSEANLARVDDEFDLDLLVTHALPFESINDAID---LMKEGKSIRTIL 200

>d1rjwa2 c.2.1.1 (A:138-305) Alcohol dehydrogenase {Bacillus stearothermophilus [TaxId: 1422]} Length = 168

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Alcohol dehydrogenase-like, C-terminal domain
domain: Alcohol dehydrogenase
species: Bacillus stearothermophilus [TaxId: 1422]

 Score = 76.3 bits (186), Expect = 3e-17
 Identities = 49/168 (29%), Positives = 78/168 (46%), Gaps = 3/168 (1%)

Query: 157 PLDATAPLLCAGITVYSPLRFYGLDKPGMHVGVVGLGGLGHVAVKFAKAMGVKVTVISTS 216
             +  AP+ CAG+T Y  L+  G  KPG  V + G+GGLGHVAV++AKAMG+ V  +   
Sbjct: 2   SFEEAAPIFCAGVTTYKALKVTGA-KPGEWVAIYGIGGLGHVAVQYAKAMGLNVVAVDIG 60

Query: 217 PSKKSEAIERLGADSFLVSRDQDEMQAAMGTMDGI--IDTVSAVHPLMPLIGLLKSQGKL 274
             K   A E          ++                + T  +          ++  G  
Sbjct: 61  DEKLELAKELGADLVVNPLKEDAAKFMKEKVGGVHAAVVTAVSKPAFQSAYNSIRRGGAC 120

Query: 275 VLVGAPEKPLELPAFSLLMGRKIVGGSMIGGMKETQEMIDFAAKHNIR 322
           VLVG P + + +P F  ++    + GS++G  K+ QE + FAA+  ++
Sbjct: 121 VLVGLPPEEMPIPIFDTVLNGIKIIGSIVGTRKDLQEALQFAAEGKVK 168

>d1vj0a2 c.2.1.1 (A:156-337) Hypothetical protein TM0436 {Thermotoga maritima [TaxId: 2336]} Length = 182

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Alcohol dehydrogenase-like, C-terminal domain
domain: Hypothetical protein TM0436
species: Thermotoga maritima [TaxId: 2336]

 Score = 76.5 bits (187), Expect = 4e-17
 Identities = 35/173 (20%), Positives = 65/173 (37%), Gaps = 11/173 (6%)

Query: 158 LDATAPLLCAGITVYSPLRFYGLDKPGMHVGVVGLGGLGHVAVKFAKAMGVKVTVISTSP 217
           LD  A  +C+G T Y     Y     G  V + G G LG   V  A+++G +  ++    
Sbjct: 3   LDVLAMAMCSGATAYHAFDEYPESFAGKTVVIQGAGPLGLFGVVIARSLGAENVIVIAGS 62

Query: 218 SKKSEAIERLGADSFLVSRDQDEMQAAMGTM--------DGIIDTVSAVHPLMPLIGLLK 269
             + +  E +GAD  L  R+    +     M        D I++       L+    LL+
Sbjct: 63  PNRLKLAEEIGADLTLNRRETSVEERRKAIMDITHGRGADFILEATGDSRALLEGSELLR 122

Query: 270 SQGKLVLVG--APEKPLELPAFSLLMGRKI-VGGSMIGGMKETQEMIDFAAKH 319
             G   + G   P+ P+    +  L+ +     G  +       + +   +++
Sbjct: 123 RGGFYSVAGVAVPQDPVPFKVYEWLVLKNATFKGIWVSDTSHFVKTVSITSRN 175

>d1kola1 b.35.1.2 (A:2-160,A:356-397) Formaldehyde dehydrogenase {Pseudomonas putida [TaxId: 303]} Length = 201

class: All beta proteins
fold: GroES-like
superfamily: GroES-like
family: Alcohol dehydrogenase-like, N-terminal domain
domain: Formaldehyde dehydrogenase
species: Pseudomonas putida [TaxId: 303]

 Score = 76.5 bits (187), Expect = 5e-17
 Identities = 29/181 (16%), Positives = 49/181 (27%), Gaps = 12/181 (6%)

Query: 32  RRATGEKDVTFKVTHCGICHSDLHMIKNEWGNTIYPIVPGHEIVGVVTEVGSKVSKFKVG 91
           R    E  V  KV    IC SD HM++     T    +     +        +  +    
Sbjct: 27  RGKKIEHGVILKVVSTNICGSDQHMVRGRT--TAQVGLVLGHEITGEVIEKGRDVENLQI 84

Query: 92  DKVGVGCMVGSCRSCDSCAIDLENYCPKVIMTYAN---KYHDGTITYGGYSDIMV--ADE 146
             +       +C  C SC       C  V    A     Y D     GG ++ ++    +
Sbjct: 85  GDLVSVPFNVACGRCRSCKEMHTGVCLTVNPARAGGAYGYVDMGDWTGGQAEYVLVPYAD 144

Query: 147 HFVVRIPEGTPLDATAPLLCAGITVYSPLRFYGLDKPGMHVGVVGLGGLGHVAVKFAKAM 206
             ++++P+         +               LD      G    G      +   K  
Sbjct: 145 FNLLKLPDRDKAMEKINIAEVVGVQV-----ISLDDAPRGYGEFDAGVPKKFVIDPHKTF 199

Query: 207 G 207
            
Sbjct: 200 S 200

>d1f8fa1 b.35.1.2 (A:4-162,A:337-371) Benzyl alcohol dehydrogenase {Acinetobacter calcoaceticus [TaxId: 471]} Length = 194

class: All beta proteins
fold: GroES-like
superfamily: GroES-like
family: Alcohol dehydrogenase-like, N-terminal domain
domain: Benzyl alcohol dehydrogenase
species: Acinetobacter calcoaceticus [TaxId: 471]

 Score = 73.8 bits (180), Expect = 3e-16
 Identities = 33/193 (17%), Positives = 61/193 (31%), Gaps = 44/193 (22%)

Query: 36  GEKDVTFKVTHCGICHSDLHMIKNEWGNTIYPIVPGHEIVGVVTEVGSKVSKFKVGDKVG 95
              +V  KV   G+CH+DL +   ++     P V GHE  G++  +G  V++ +VGD V 
Sbjct: 27  QGDEVLVKVVATGMCHTDLIVRDQKY-PVPLPAVLGHEGSGIIEAIGPNVTELQVGDHVV 85

Query: 96  VGCMVGSCRSCDSCAIDLENYCPKVIMTY----------------ANKYHDGTITYGGYS 139
           +      C  C  C      YC +                         +D       ++
Sbjct: 86  LSYGY--CGKCTQCNTGNPAYCSEFFGRNFSGADSEGNHALCTHDQGVVNDHFFAQSSFA 143

Query: 140 DIMVADEHFVVRIPEGTPLDATAPLLCAGITVYSPLRFYGLDKPGMHVGVVGLGGLGHVA 199
              ++ E+  V++ +  P D                                   +   A
Sbjct: 144 TYALSRENNTVKVTKDFPFDQLVKFYAF-------------------------DEINQAA 178

Query: 200 VKFAKAMGVKVTV 212
           +   K + +K  +
Sbjct: 179 IDSRKGITLKPII 191

>d1h2ba2 c.2.1.1 (A:155-326) Alcohol dehydrogenase {Archaeon Aeropyrum pernix [TaxId: 56636]} Length = 172

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Alcohol dehydrogenase-like, C-terminal domain
domain: Alcohol dehydrogenase
species: Archaeon Aeropyrum pernix [TaxId: 56636]

 Score = 73.1 bits (178), Expect = 4e-16
 Identities = 46/166 (27%), Positives = 74/166 (44%), Gaps = 6/166 (3%)

Query: 158 LDATAPLLCAGITVYSPLRFYGLD-KPGMHVGVVGLGGLGHVAVKFAKAMGVKVTVISTS 216
           L   APL  AGIT Y  ++       PG +V +VG+GGLGH+AV+  K M     +    
Sbjct: 6   LVEMAPLADAGITAYRAVKKAARTLYPGAYVAIVGVGGLGHIAVQLLKVMTPATVIALDV 65

Query: 217 PSKKSEAIERLGADSFLVSRDQDE----MQAAMGTMDGIIDTVSAVHPLMPLIGLLKSQG 272
             +K +  ERLGAD  + +R               ++  +D V +   +     LL   G
Sbjct: 66  KEEKLKLAERLGADHVVDARRDPVKQVMELTRGRGVNVAMDFVGSQATVDYTPYLLGRMG 125

Query: 273 KLVLVGAPEKPLELPAFSLLMGRKIVGGSMIGGMKETQEMIDFAAK 318
           +L++VG   +    P   ++       GS++G   E  E++  A +
Sbjct: 126 RLIIVGYGGELRF-PTIRVISSEVSFEGSLVGNYVELHELVTLALQ 170

>d1f8fa2 c.2.1.1 (A:163-336) Benzyl alcohol dehydrogenase {Acinetobacter calcoaceticus [TaxId: 471]} Length = 174

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Alcohol dehydrogenase-like, C-terminal domain
domain: Benzyl alcohol dehydrogenase
species: Acinetobacter calcoaceticus [TaxId: 471]

 Score = 73.0 bits (178), Expect = 5e-16
 Identities = 37/171 (21%), Positives = 66/171 (38%), Gaps = 9/171 (5%)

Query: 157 PLDATAPLLCAGITVYSPLRFYGLDKPGMHVGVVGLGGLGHVAVKFAKAMGVKVTVISTS 216
           P++   PL C   T            P       G G +G  A+  AK  G  + +    
Sbjct: 2   PIELLGPLGCGIQTGAGACINALKVTPASSFVTWGAGAVGLSALLAAKVCGASIIIAVDI 61

Query: 217 PSKKSEAIERLGADSFLVSRDQDEMQAAM----GTMDGIIDTVSAVHPLMPLIGLLKSQG 272
              + E  ++LGA   + S+ QD + A      G ++  +++  +   L   +  L   G
Sbjct: 62  VESRLELAKQLGATHVINSKTQDPVAAIKEITDGGVNFALESTGSPEILKQGVDALGILG 121

Query: 273 KLVLVGAPEKP--LELPAFSLLMGRKIVGGSMIGGMK---ETQEMIDFAAK 318
           K+ +VGAP+     +     LL+G K + G + G         E++    +
Sbjct: 122 KIAVVGAPQLGTTAQFDVNDLLLGGKTILGVVEGSGSPKKFIPELVRLYQQ 172

>d1e3ia2 c.2.1.1 (A:168-341) Alcohol dehydrogenase {Mouse (Mus musculus), class II [TaxId: 10090]} Length = 174

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Alcohol dehydrogenase-like, C-terminal domain
domain: Alcohol dehydrogenase
species: Mouse (Mus musculus), class II [TaxId: 10090]

 Score = 73.0 bits (178), Expect = 5e-16
 Identities = 36/170 (21%), Positives = 62/170 (36%), Gaps = 8/170 (4%)

Query: 157 PLDATAPLLCAGITVYSPLRFYGLDKPGMHVGVVGLGGLGHVAVKFAKAMGVKVTVISTS 216
            L+    + C   + Y          PG    V GLG +G  A+   K  G    +    
Sbjct: 2   NLERVCLIGCGFSSGYGAAINTAKVTPGSTCAVFGLGCVGLSAIIGCKIAGASRIIAIDI 61

Query: 217 PSKKSEAIERLGADSFLVSRDQDEMQAAM------GTMDGIIDTVSAVHPLMPLI-GLLK 269
             +K    + LGA   L  R+ D+    +      G +D  +D       L   +   + 
Sbjct: 62  NGEKFPKAKALGATDCLNPRELDKPVQDVITELTAGGVDYSLDCAGTAQTLKAAVDCTVL 121

Query: 270 SQGKLVLVGAPEKPLELPAFSLLMGRKIVGGSMIGGMKETQEMIDFAAKH 319
             G   +VGA    + +P   +++GR I  G+  GG K    + +  + +
Sbjct: 122 GWGSCTVVGAKVDEMTIPTVDVILGRSIN-GTFFGGWKSVDSVPNLVSDY 170

>d1p0fa2 c.2.1.1 (A:1164-1337) Alcohol dehydrogenase {Frog (Rana perezi) [TaxId: 8403]} Length = 174

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Alcohol dehydrogenase-like, C-terminal domain
domain: Alcohol dehydrogenase
species: Frog (Rana perezi) [TaxId: 8403]

 Score = 72.2 bits (176), Expect = 1e-15
 Identities = 42/173 (24%), Positives = 62/173 (35%), Gaps = 13/173 (7%)

Query: 157 PLDATAPLLCAGITVYSPLRFYGLDKPGMHVGVVGLGGLGHVAVKFAKAMGVKVTVISTS 216
           PL++   + C   T Y          PG    V GLGG+G  A+   KA G    +   +
Sbjct: 2   PLES-CLIGCGFATGYGAAVNTAKVTPGSTCAVFGLGGVGFSAIVGCKAAGASRIIGVGT 60

Query: 217 PSKKSEAIERLGADSFLVSRDQDEMQAAM-------GTMDGIIDTVSAVHPLMPLIGLLK 269
              K      LGA   L  +D D+    +       G    +         +  L     
Sbjct: 61  HKDKFPKAIELGATECLNPKDYDKPIYEVICEKTNGGVDYAVECAGRIETMMNALQSTYC 120

Query: 270 SQGKLVLVGAP--EKPLELPAFSLLMGRKIVGGSMIGG--MKETQEMIDFAAK 318
             G  V++G     + L L    LL GR +  GS+ GG   +E   ++D   K
Sbjct: 121 GSGVTVVLGLASPNERLPLDPLLLLTGRSLK-GSVFGGFKGEEVSRLVDDYMK 172

>d1rjwa1 b.35.1.2 (A:1-137,A:306-339) Alcohol dehydrogenase {Bacillus stearothermophilus [TaxId: 1422]} Length = 171

class: All beta proteins
fold: GroES-like
superfamily: GroES-like
family: Alcohol dehydrogenase-like, N-terminal domain
domain: Alcohol dehydrogenase
species: Bacillus stearothermophilus [TaxId: 1422]

 Score = 69.6 bits (169), Expect = 7e-15
 Identities = 46/157 (29%), Positives = 71/157 (45%), Gaps = 12/157 (7%)

Query: 36  GEKDVTFKVTHCGICHSDLHMIKNEWGNTIYPIVP-GHEIVGVVTEVGSKVSKFKVGDKV 94
              +V  ++  CG+CH+DLH    +W       +  GHE VG+V EVG  V+  KVGD+V
Sbjct: 24  SYGEVLVRIKACGVCHTDLHAAHGDWPVKPKLPLIPGHEGVGIVEEVGPGVTHLKVGDRV 83

Query: 95  GVGCMVGSCRSCDSCAIDLENYCPKVIMTYANKYHDGTITYGGYSDIMVADEHFVVRIPE 154
           G+  +  +C  CD C    E  C        ++ + G    GGY++   A   +VV+IP+
Sbjct: 84  GIPWLYSACGHCDYCLSGQETLCE-------HQKNAGYSVDGGYAEYCRAAADYVVKIPD 136

Query: 155 GTPLDATAPLLCAGITVYSPLRFYGLDKPGMHVGVVG 191
            T ++   PL          L+       G  V  + 
Sbjct: 137 NTIIEV-QPLEKINEVFDRMLKG---QINGRVVLTLE 169

>d1e3ja1 b.35.1.2 (A:4-142,A:313-351) Ketose reductase (sorbitol dehydrogenase) {Silverleaf whitefly (Bemisia argentifolii) [TaxId: 77855]} Length = 178

class: All beta proteins
fold: GroES-like
superfamily: GroES-like
family: Alcohol dehydrogenase-like, N-terminal domain
domain: Ketose reductase (sorbitol dehydrogenase)
species: Silverleaf whitefly (Bemisia argentifolii) [TaxId: 77855]

 Score = 69.3 bits (168), Expect = 1e-14
 Identities = 37/159 (23%), Positives = 54/159 (33%), Gaps = 11/159 (6%)

Query: 36  GEKDVTFKVTHCGICHSDLHMIKNEWGN---TIYPIVPGHEIVGVVTEVGSKVSKFKVGD 92
            E +V  ++ + GIC SD+H  ++          P+V GHE  G V +VG  V   K GD
Sbjct: 24  KEDEVLLQMAYVGICGSDVHYYEHGRIADFIVKDPMVIGHEASGTVVKVGKNVKHLKKGD 83

Query: 93  KVGVGCMVGSCRSCDSCAIDLENYCPKVIMTYANKYHDGTITYGGYSDIMVADEHFVVRI 152
           +V V   V  CR C  C     N CP +              Y       V    F  ++
Sbjct: 84  RVAVEPGV-PCRRCQFCKEGKYNLCPDLTFCATPPDDGNLARY------YVHAADFCHKL 136

Query: 153 PEGTPLDATAPLLCAGITVYSPLRFYGLDKPGMHVGVVG 191
           P+   +                       K    + V+ 
Sbjct: 137 PDNCNVKQLVTHSFKLEQTVDAFEAARK-KADNTIKVMI 174

>d2jhfa2 c.2.1.1 (A:164-339) Alcohol dehydrogenase {Horse (Equus caballus) [TaxId: 9796]} Length = 176

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Alcohol dehydrogenase-like, C-terminal domain
domain: Alcohol dehydrogenase
species: Horse (Equus caballus) [TaxId: 9796]

 Score = 68.5 bits (166), Expect = 2e-14
 Identities = 28/165 (16%), Positives = 58/165 (35%), Gaps = 8/165 (4%)

Query: 156 TPLDATAPLLCAGITVYSPLRFYGLDKPGMHVGVVGLGGLGHVAVKFAKAMGVKVTVIST 215
           +PL+    + C   T Y           G    V GLGG+G   +   KA G    +   
Sbjct: 1   SPLEKVCLIGCGFSTGYGSAVKVAKVTQGSTCAVFGLGGVGLSVIMGCKAAGAARIIGVD 60

Query: 216 SPSKKSEAIERLGADSFLVSRDQDE------MQAAMGTMDGIIDTVSAVHPLMPLIGLLK 269
               K    + +GA   +  +D  +       + + G +D   + +  +  ++  +   +
Sbjct: 61  INKDKFAKAKEVGATECVNPQDYKKPIQEVLTEMSNGGVDFSFEVIGRLDTMVTALSCCQ 120

Query: 270 SQG--KLVLVGAPEKPLELPAFSLLMGRKIVGGSMIGGMKETQEM 312
                 +++   P+         LL+  +   G++ GG K    +
Sbjct: 121 EAYGVSVIVGVPPDSQNLSMNPMLLLSGRTWKGAIFGGFKSKDSV 165

>d1cdoa2 c.2.1.1 (A:165-339) Alcohol dehydrogenase {Cod (Gadus callarias) [TaxId: 8053]} Length = 175

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Alcohol dehydrogenase-like, C-terminal domain
domain: Alcohol dehydrogenase
species: Cod (Gadus callarias) [TaxId: 8053]

 Score = 67.0 bits (162), Expect = 7e-14
 Identities = 42/163 (25%), Positives = 59/163 (36%), Gaps = 7/163 (4%)

Query: 157 PLDATAPLLCAGITVYSPLRFYGLDKPGMHVGVVGLGGLGHVAVKFAKAMGVKVTVISTS 216
           PLD    L C   T +         +PG    V GLG +G  AV    + G K  +    
Sbjct: 2   PLDTVCLLGCGVSTGFGAAVNTAKVEPGSTCAVFGLGAVGLAAVMGCHSAGAKRIIAVDL 61

Query: 217 PSKKSEAIERLGADSFLVSRDQDE------MQAAMGTMDGIIDTVSAVHPLMPLIGL-LK 269
              K E  +  GA  F+   D  E       +   G +D  ++ V  V  +   +   LK
Sbjct: 62  NPDKFEKAKVFGATDFVNPNDHSEPISQVLSKMTNGGVDFSLECVGNVGVMRNALESCLK 121

Query: 270 SQGKLVLVGAPEKPLELPAFSLLMGRKIVGGSMIGGMKETQEM 312
             G  VLVG  +          L+  +   GSM GG K    +
Sbjct: 122 GWGVSVLVGWTDLHDVATRPIQLIAGRTWKGSMFGGFKGKDGV 164

>d1p0fa1 b.35.1.2 (A:1001-1163,A:1338-1372) Alcohol dehydrogenase {Frog (Rana perezi) [TaxId: 8403]} Length = 198

class: All beta proteins
fold: GroES-like
superfamily: GroES-like
family: Alcohol dehydrogenase-like, N-terminal domain
domain: Alcohol dehydrogenase
species: Frog (Rana perezi) [TaxId: 8403]

 Score = 67.6 bits (164), Expect = 7e-14
 Identities = 39/176 (22%), Positives = 60/176 (34%), Gaps = 26/176 (14%)

Query: 36  GEKDVTFKVTHCGICHSDLHMIKNEWGNTIYPIVPGHEIVGVVTEVGSKVSKFKVGDKVG 95
              +V  K+   GIC SD  ++K    +    I  GHE VGVV  +G+ V+  K GDKV 
Sbjct: 32  KAHEVRIKILASGICGSDSSVLKEIIPSKFPVI-LGHEAVGVVESIGAGVTCVKPGDKV- 89

Query: 96  VGCMVGSCRSCDSCAIDLENYCPKVIMTYANKYH-DGTITY-------------GGYSDI 141
           +   V  C SC +C     N+C K  M        D T  +               +++ 
Sbjct: 90  IPLFVPQCGSCRACKSSNSNFCEKNDMGAKTGLMADMTSRFTCRGKPIYNLMGTSTFTEY 149

Query: 142 MVADEHFVVRIPEGTPLDATAPLLCAGITVYSPLRFYGLDKPGMHVGVVGLGGLGH 197
            V  +  V +I     ++           +               +   G G    
Sbjct: 150 TVVADIAVAKIDPKINVNFLVSTKLTLDQI----------NKAFELLSSGQGVRSI 195

>d1vj0a1 b.35.1.2 (A:2-155,A:338-367) Hypothetical protein TM0436 {Thermotoga maritima [TaxId: 2336]} Length = 184

class: All beta proteins
fold: GroES-like
superfamily: GroES-like
family: Alcohol dehydrogenase-like, N-terminal domain
domain: Hypothetical protein TM0436
species: Thermotoga maritima [TaxId: 2336]

 Score = 66.4 bits (161), Expect = 1e-13
 Identities = 33/143 (23%), Positives = 52/143 (36%), Gaps = 9/143 (6%)

Query: 36  GEKDVTFKVTHCGICHSDLHMIKNEWGNTIYPIVPGHEIVGVVTEVGSKVSKFKVGDKVG 95
               +  ++   G+C SD+HM + E      PI+ GHE  G V EV  +           
Sbjct: 28  PRGSILVEILSAGVCGSDVHMFRGEDPRVPLPIILGHEGAGRVVEVNGEKRDLNGELLKP 87

Query: 96  VGCMVGS----CRSCDSCAIDLENYCPK--VIMTYANKYHDGTITYGGYSDIMVAD-EHF 148
              +V +    C  C  C +  E Y      +        +     G YS  +V D E  
Sbjct: 88  GDLIVWNRGITCGECYWCKVSKEPYLCPNRKVYGINRGCSEYPHLRGCYSSHIVLDPETD 147

Query: 149 VVRIPEGTPLDATAPLLCAGITV 171
           V+++ E   +    PL  A   +
Sbjct: 148 VLKVSEK--ITHRLPLKEANKAL 168

>d2fzwa2 c.2.1.1 (A:163-338) Alcohol dehydrogenase {Human (Homo sapiens), different isozymes [TaxId: 9606]} Length = 176

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Alcohol dehydrogenase-like, C-terminal domain
domain: Alcohol dehydrogenase
species: Human (Homo sapiens), different isozymes [TaxId: 9606]

 Score = 65.4 bits (158), Expect = 3e-13
 Identities = 31/171 (18%), Positives = 56/171 (32%), Gaps = 8/171 (4%)

Query: 157 PLDATAPLLCAGITVYSPLRFYGLDKPGMHVGVVGLGGLGHVAVKFAKAMGVKVTVISTS 216
           PLD    L C   T Y         +PG    V GLGG+G   +   K  G    +    
Sbjct: 2   PLDKVCLLGCGISTGYGAAVNTAKLEPGSVCAVFGLGGVGLAVIMGCKVAGASRIIGVDI 61

Query: 217 PSKKSEAIERLGADSFLVSRDQDE------MQAAMGTMDGIIDTVSAVHPLMPLIGLLKS 270
              K    +  GA   +  +D  +      ++   G +D   + +  V  +   +     
Sbjct: 62  NKDKFARAKEFGATECINPQDFSKPIQEVLIEMTDGGVDYSFECIGNVKVMRAALEACHK 121

Query: 271 QGKLVLVG--APEKPLELPAFSLLMGRKIVGGSMIGGMKETQEMIDFAAKH 319
              + +V   A            L+  +   G+  GG K  + +    +++
Sbjct: 122 GWGVSVVVGVAASGEEIATRPFQLVTGRTWKGTAFGGWKSVESVPKLVSEY 172

>d1d1ta2 c.2.1.1 (A:163-338) Alcohol dehydrogenase {Human (Homo sapiens), different isozymes [TaxId: 9606]} Length = 176

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Alcohol dehydrogenase-like, C-terminal domain
domain: Alcohol dehydrogenase
species: Human (Homo sapiens), different isozymes [TaxId: 9606]

 Score = 64.9 bits (157), Expect = 4e-13
 Identities = 35/165 (21%), Positives = 55/165 (33%), Gaps = 10/165 (6%)

Query: 157 PLDATAPLLCAGITVYSPLRFYGLDKPGMHVGVVGLGGLGHVAVKFAKAMGVKVTVISTS 216
           P +    + C   T Y      G  KPG    V GLGG+G   +   K+ G    +    
Sbjct: 3   PPEKVCLIGCGFSTGYGAAVKTGKVKPGSTCVVFGLGGVGLSVIMGCKSAGASRIIGIDL 62

Query: 217 PSKKSEAIERLGADSFLVSRDQDEMQAAMGT-------MDGIIDTVSAVHPLMPLIGLLK 269
              K E    +GA   +  +D  +  + + +                    +  L     
Sbjct: 63  NKDKFEKAMAVGATECISPKDSTKPISEVLSEMTGNNVGYTFEVIGHLETMIDALASCHM 122

Query: 270 SQGKLVLVGAPEKP--LELPAFSLLMGRKIVGGSMIGGMKETQEM 312
           + G  V+VG P     L      L  GR    G + GG+K   ++
Sbjct: 123 NYGTSVVVGVPPSAKMLTYDPMLLFTGRTWK-GCVFGGLKSRDDV 166

>d1pl8a1 b.35.1.2 (A:1-145,A:317-356) Ketose reductase (sorbitol dehydrogenase) {Human (Homo sapiens) [TaxId: 9606]} Length = 185

class: All beta proteins
fold: GroES-like
superfamily: GroES-like
family: Alcohol dehydrogenase-like, N-terminal domain
domain: Ketose reductase (sorbitol dehydrogenase)
species: Human (Homo sapiens) [TaxId: 9606]

 Score = 64.2 bits (155), Expect = 8e-13
 Identities = 31/162 (19%), Positives = 56/162 (34%), Gaps = 16/162 (9%)

Query: 36  GEKDVTFKVTHCGICHSDLHMIKNEWGNTI---YPIVPGHEIVGVVTEVGSKVSKFKVGD 92
           G  +V  ++   GIC SD+H  +           P+V GHE  G V +VGS V   K GD
Sbjct: 30  GPNEVLLRMHSVGICGSDVHYWEYGRIGNFIVKKPMVLGHEASGTVEKVGSSVKHLKPGD 89

Query: 93  KVGVGCMVGSCRSCDSCAIDLENYCPKVIMTYANKYHDGTITYGGYSDIMVADEHFVVRI 152
           +V +        + + C +   N  P +              +         +  F  ++
Sbjct: 90  RVAIEPGA-PRENDEFCKMGRYNLSPSIFFCATPPDDGNLCRF------YKHNAAFCYKL 142

Query: 153 PEGTPLDATAPL-LCAGITVYSPLRFYGLDKPGMHVGVVGLG 193
           P+      T    L   +  +   +       G+ + ++   
Sbjct: 143 PDNVKPLVTHRFPLEKALEAFETFKK----GLGLKI-MLKCD 179

>d2jhfa1 b.35.1.2 (A:1-163,A:340-374) Alcohol dehydrogenase {Horse (Equus caballus) [TaxId: 9796]} Length = 198

class: All beta proteins
fold: GroES-like
superfamily: GroES-like
family: Alcohol dehydrogenase-like, N-terminal domain
domain: Alcohol dehydrogenase
species: Horse (Equus caballus) [TaxId: 9796]

 Score = 62.2 bits (150), Expect = 4e-12
 Identities = 38/172 (22%), Positives = 57/172 (33%), Gaps = 23/172 (13%)

Query: 36  GEKDVTFKVTHCGICHSDLHMIKNEWGNTIYPIVPGHEIVGVVTEVGSKVSKFKVGDKVG 95
              +V  K+   GIC SD H++       +  I   HE  G+V  +G  V+  + GDKV 
Sbjct: 32  KAHEVRIKMVATGICRSDDHVVSGTLVTPLPVIAG-HEAAGIVESIGEGVTTVRPGDKV- 89

Query: 96  VGCMVGSCRSCDSCAIDLENYCPKVIMTYANKYHDGTITY--------------GGYSDI 141
           +      C  C  C     N+C K  ++          +                 +S  
Sbjct: 90  IPLFTPQCGKCRVCKHPEGNFCLKNDLSMPRGTMQDGTSRFTCRGKPIHHFLGTSTFSQY 149

Query: 142 MVADEHFVVRIPEGTPLD--ATAPLLCAGITVYSPLRFYGLDKPGMHVGVVG 191
            V DE  V +I     LD   T  L    I          L + G  +  + 
Sbjct: 150 TVVDEISVAKIDAAFALDPLITHVLPFEKINEGF-----DLLRSGESIRTIL 196

>d1h2ba1 b.35.1.2 (A:17-154,A:327-359) Alcohol dehydrogenase {Archaeon Aeropyrum pernix [TaxId: 56636]} Length = 171

class: All beta proteins
fold: GroES-like
superfamily: GroES-like
family: Alcohol dehydrogenase-like, N-terminal domain
domain: Alcohol dehydrogenase
species: Archaeon Aeropyrum pernix [TaxId: 56636]

 Score = 60.8 bits (146), Expect = 7e-12
 Identities = 38/160 (23%), Positives = 66/160 (41%), Gaps = 13/160 (8%)

Query: 33  RATGEKDVTFKVTHCGICHSDLHMIKNEWGNTIYP---IVPGHEIVGVVTEVGSKVSKFK 89
           R  G  DV  ++   G+CH+DLH+++  W   + P      GHE VG + EV   V   +
Sbjct: 21  RLEGRFDVIVRIAGAGVCHTDLHLVQGMWHELLQPKLPYTLGHENVGYIEEVAEGVEGLE 80

Query: 90  VGDKVGVGCMVGSCRSCDSCAIDLENYCPKVIMTYANKYHDGTITYGGYSDIMVADEHFV 149
            GD V +   V +  +C +C    + +C  +          G    GG+++ M      V
Sbjct: 81  KGDPVILHPAV-TDGTCLACRAGEDMHCENLEFP-------GLNIDGGFAEFMRTSHRSV 132

Query: 150 VRIPEGTPLDATAPLLCAGITVYSPLRFYGLDKPGMHVGV 189
           +++P+   ++     L     V   L    +   G  V +
Sbjct: 133 IKLPKDVRVEVDIHKLDEINDVLERLEKGEV--LGRAVLI 170

>d1jvba2 c.2.1.1 (A:144-313) Alcohol dehydrogenase {Archaeon Sulfolobus solfataricus [TaxId: 2287]} Length = 170

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Alcohol dehydrogenase-like, C-terminal domain
domain: Alcohol dehydrogenase
species: Archaeon Sulfolobus solfataricus [TaxId: 2287]

 Score = 60.9 bits (146), Expect = 8e-12
 Identities = 49/169 (28%), Positives = 75/169 (44%), Gaps = 8/169 (4%)

Query: 156 TPLDATAPLLCAGITVYSPLRFYGLDKPGMHVGVVG-LGGLGHVAVKFAKAMGVKVTVIS 214
             ++A APL C+GIT Y  +R   L  P   + VVG  GGLG +AV+ AKA+     +  
Sbjct: 2   NAVEA-APLTCSGITTYRAVRKASL-DPTKTLLVVGAGGGLGTMAVQIAKAVSGATIIGV 59

Query: 215 TSPSKKSEAIERLGADSFLVSRDQDEMQA-----AMGTMDGIIDTVSAVHPLMPLIGLLK 269
               +  EA +R GAD  + +  QD +           +D +ID  ++   L      L 
Sbjct: 60  DVREEAVEAAKRAGADYVINASMQDPLAEIRRITESKGVDAVIDLNNSEKTLSVYPKALA 119

Query: 270 SQGKLVLVGAPEKPLELPAFSLLMGRKIVGGSMIGGMKETQEMIDFAAK 318
            QGK V+VG     L   A  + +      GS++G   +   ++  A  
Sbjct: 120 KQGKYVMVGLFGADLHYHAPLITLSEIQFVGSLVGNQSDFLGIMRLAEA 168

>d1jqba1 b.35.1.2 (A:1001-1139,A:1314-1351) Bacterial secondary alcohol dehydrogenase {Clostridium beijerinckii [TaxId: 1520]} Length = 177

class: All beta proteins
fold: GroES-like
superfamily: GroES-like
family: Alcohol dehydrogenase-like, N-terminal domain
domain: Bacterial secondary alcohol dehydrogenase
species: Clostridium beijerinckii [TaxId: 1520]

 Score = 60.8 bits (146), Expect = 1e-11
 Identities = 35/165 (21%), Positives = 58/165 (35%), Gaps = 14/165 (8%)

Query: 36  GEKDVTFKVTHCGICHSDLHMIKNEWGNTIYPIVPGHEIVGVVTEVGSKVSKFKVGDKVG 95
           G  D   +      C SD+H +          ++ GHE VG V EVGS+V  FK GD+V 
Sbjct: 23  GSYDAIVRPLAVSPCTSDIHTVFEGALGDRKNMILGHEAVGEVVEVGSEVKDFKPGDRVI 82

Query: 96  VGCMVGSCRSCDSCAIDLENYCPKVIMTYANKYHDGTITYGGYSDIMVADEHFVVRIPEG 155
           V C     RS +  A   ++    +     + + D    +G Y  +  AD   +  +P+ 
Sbjct: 83  VPCTTPDWRSLEVQAGFQQHSNGMLAGWKFSNFKD--GVFGEYFHVNDAD-MNLAILPKD 139

Query: 156 TPLDATAPLLCAGITVYSPLRFYGLDKPGMHVGVVGLGGLGHVAV 200
             L      +  G                  + ++       +  
Sbjct: 140 VDLSKLVTHVYHGFD-----------HIEEALLLMKDKPKDLIKA 173

>d1jqba2 c.2.1.1 (A:1140-1313) Bacterial secondary alcohol dehydrogenase {Clostridium beijerinckii [TaxId: 1520]} Length = 174

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Alcohol dehydrogenase-like, C-terminal domain
domain: Bacterial secondary alcohol dehydrogenase
species: Clostridium beijerinckii [TaxId: 1520]

 Score = 59.2 bits (142), Expect = 4e-11
 Identities = 30/166 (18%), Positives = 56/166 (33%), Gaps = 10/166 (6%)

Query: 157 PLDATAPLLCAGITVYSPLRFYGLDKPGMHVGVVGLGGLGHVAVKFAKAMGVKVTVISTS 216
           PL+    +     T +       + + G  V V+G+G +G + +  AK  G    +   S
Sbjct: 2   PLENAVMITDMMTTGFHGAELADI-EMGSSVVVIGIGAVGLMGIAGAKLRGAGRIIGVGS 60

Query: 217 PSKKSEAIERLGADSFLVSRDQDEMQAAMGT-----MDGIIDTVSAVHPLMPLIGLLKSQ 271
                EA +  GA   L  ++       M       +D +I        L   + ++K  
Sbjct: 61  RPICVEAAKFYGATDILNYKNGHIEDQVMKLTNGKGVDRVIMAGGGSETLSQAVKMVKPG 120

Query: 272 GKLVLVGAPEKPLELP----AFSLLMGRKIVGGSMIGGMKETQEMI 313
           G +  +        L      +   M  K + G +  G +   E +
Sbjct: 121 GIISNINYHGSGDALLIPRVEWGCGMAHKTIKGGLCPGGRLRAERL 166

>d1jvba1 b.35.1.2 (A:1-143,A:314-347) Alcohol dehydrogenase {Archaeon Sulfolobus solfataricus [TaxId: 2287]} Length = 177

class: All beta proteins
fold: GroES-like
superfamily: GroES-like
family: Alcohol dehydrogenase-like, N-terminal domain
domain: Alcohol dehydrogenase
species: Archaeon Sulfolobus solfataricus [TaxId: 2287]

 Score = 58.4 bits (140), Expect = 6e-11
 Identities = 38/154 (24%), Positives = 58/154 (37%), Gaps = 17/154 (11%)

Query: 36  GEKDVTFKVTHCGICHSDLHMIKNEWGNTI--------YPIVPGHEIVGVVTEVGSKVSK 87
               V  KV   G+CHSD+HM +  +GN           P+  GHEI G + EVG +V  
Sbjct: 24  KGPQVLIKVEAAGVCHSDVHMRQGRFGNLRIVEDLGVKLPVTLGHEIAGKIEEVGDEVVG 83

Query: 88  FKVGDKVGVGCMVGSCRSCDSCAIDLENYCPKVIMTYANKYHDGTITYGGYSD-IMVADE 146
           +  GD V V        +C  C I  E+ C             G    G Y++ ++V   
Sbjct: 84  YSKGDLVAV-NPWQGEGNCYYCRIGEEHLCDSPRWL-------GINFDGAYAEYVIVPHY 135

Query: 147 HFVVRIPEGTPLDATAPLLCAGITVYSPLRFYGL 180
            ++ ++    P+      L         L  +  
Sbjct: 136 KYMYKLRRVKPMITKTMKLEEANEAIDNLENFKA 169

>d1iz0a2 c.2.1.1 (A:99-269) Quinone oxidoreductase {Thermus thermophilus [TaxId: 274]} Length = 171

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Alcohol dehydrogenase-like, C-terminal domain
domain: Quinone oxidoreductase
species: Thermus thermophilus [TaxId: 274]

 Score = 49.3 bits (116), Expect = 9e-08
 Identities = 35/165 (21%), Positives = 62/165 (37%), Gaps = 5/165 (3%)

Query: 156 TPLDATAPLLCAGITVYSPLRFYGLDKPGMHVGVVGLGGLGHVAVKFAKAMGVKVTVIST 215
           +P +A A    + +T Y  L+     +PG  V V    G    A            + + 
Sbjct: 2   SPEEA-AAFPVSFLTAYLALKRAQA-RPGEKVLVQAAAGALGTAAVQVARAMGLRVLAAA 59

Query: 216 SPSKKSEAIERLGADSFLVSRDQDEMQAAMGTMDGIIDTVSAVHPLMPLIGLLKSQGKLV 275
           S  +K      LGA+      +  E   A G +D +++       +   +GLL   G+LV
Sbjct: 60  SRPEKLALPLALGAEEAATYAEVPERAKAWGGLDLVLEVRG--KEVEESLGLLAHGGRLV 117

Query: 276 LVGAPE-KPLELPAFSLLMGRKIVGGSMIGGMKETQEMIDFAAKH 319
            +GA E +   +P   L+     V G  +  +     +++ A   
Sbjct: 118 YIGAAEGEVAPIPPLRLMRRNLAVLGFWLTPLLREGALVEEALGF 162

>d1e3ja2 c.2.1.1 (A:143-312) Ketose reductase (sorbitol dehydrogenase) {Silverleaf whitefly (Bemisia argentifolii) [TaxId: 77855]} Length = 170

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Alcohol dehydrogenase-like, C-terminal domain
domain: Ketose reductase (sorbitol dehydrogenase)
species: Silverleaf whitefly (Bemisia argentifolii) [TaxId: 77855]

 Score = 46.9 bits (110), Expect = 5e-07
 Identities = 29/145 (20%), Positives = 55/145 (37%), Gaps = 11/145 (7%)

Query: 182 KPGMHVGVVGLGGLGHVAVKFAKAMGVKVTVISTSPSKKSEAIERLGADSFLVSRDQDEM 241
           + G  V V+G G +G V+V  AKA      V +    ++ E  +  GAD  LV     E 
Sbjct: 25  QLGTTVLVIGAGPIGLVSVLAAKAY-GAFVVCTARSPRRLEVAKNCGADVTLVVDPAKEE 83

Query: 242 QAAMGTM---------DGIIDTVSAVHPLMPLIGLLKSQGKLVLVGAPEKPLELPAFSLL 292
           ++++            +  ID       +   I + ++ G L+LVG   + + +P  +  
Sbjct: 84  ESSIIERIRSAIGDLPNVTIDCSGNEKCITIGINITRTGGTLMLVGMGSQMVTVPLVNAC 143

Query: 293 MGRKIVGGSMIGGMKETQEMIDFAA 317
                +         +    ++  A
Sbjct: 144 AREIDIKSVF-RYCNDYPIALEMVA 167

>d1qora2 c.2.1.1 (A:113-291) Quinone oxidoreductase {Escherichia coli [TaxId: 562]} Length = 179

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Alcohol dehydrogenase-like, C-terminal domain
domain: Quinone oxidoreductase
species: Escherichia coli [TaxId: 562]

 Score = 44.6 bits (104), Expect = 3e-06
 Identities = 34/165 (20%), Positives = 59/165 (35%), Gaps = 8/165 (4%)

Query: 162 APLLCAGITVYSPLRFYGLDKPGMHVGVVGLGG-LGHVAVKFAKAMGVKVTVISTSPSKK 220
           A     G+TVY  LR     KP          G +G +A ++AKA+G K+     +  K 
Sbjct: 7   AASFLKGLTVYYLLRKTYEIKPDEQFLFHAAAGGVGLIACQWAKALGAKLIGTVGTAQKA 66

Query: 221 SEAIERLGADSFLVSRDQDEMQAAM----GTMDGIIDTVSAVHPLMPLIGLLKSQGKLVL 276
             A++  GA   +  R++D ++       G    ++            +  L+ +G +V 
Sbjct: 67  QSALKA-GAWQVINYREEDLVERLKEITGGKKVRVVYDSVGRDTWERSLDCLQRRGLMVS 125

Query: 277 VGAP--EKPLELPAFSLLMGRKIVGGSMIGGMKETQEMIDFAAKH 319
            G                 G   V    + G   T+E +  A+  
Sbjct: 126 FGNSSGAVTGVNLGILNQKGSLYVTRPSLQGYITTREELTEASNE 170

>d1tt7a1 b.35.1.2 (A:2-127,A:295-330) Hypothetical protein YhfP {Bacillus subtilis [TaxId: 1423]} Length = 162

class: All beta proteins
fold: GroES-like
superfamily: GroES-like
family: Alcohol dehydrogenase-like, N-terminal domain
domain: Hypothetical protein YhfP
species: Bacillus subtilis [TaxId: 1423]

 Score = 44.5 bits (104), Expect = 3e-06
 Identities = 23/166 (13%), Positives = 40/166 (24%), Gaps = 33/166 (19%)

Query: 36  GEKDVTFKVTHCGICHSDLHMIKNEWGNTIYPIVPGHEIVGVVTEVGSKVSKFKVGDKVG 95
            +  V  KV + GI + D    K                                     
Sbjct: 29  PKDGVLIKVAYSGINYKDGLAGKAGGNIVREY---------------------------- 60

Query: 96  VGCMVGSCRSCDSCAIDLENYCPKVIMTYANKYHDGTITYGGYSDIMVADEHFVVRIPEG 155
              ++    +  +     +    +     A  Y  G    GG S+       ++V +P+ 
Sbjct: 61  --PLILGIDAAGTVVSSNDPRFAEGDEVIATSYELGVSRDGGLSEYASVPGDWLVPLPQN 118

Query: 156 TPLDATAPLLCAGITVYSPLRFYGLDKPGMHVGVVGLGGLGHVAVK 201
             L          I           + PG    ++     G V VK
Sbjct: 119 LSLKEAMVDQLLTIVDREVSL---EETPGALKDILQNRIQGRVIVK 161

>d1pl8a2 c.2.1.1 (A:146-316) Ketose reductase (sorbitol dehydrogenase) {Human (Homo sapiens) [TaxId: 9606]} Length = 171

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Alcohol dehydrogenase-like, C-terminal domain
domain: Ketose reductase (sorbitol dehydrogenase)
species: Human (Homo sapiens) [TaxId: 9606]

 Score = 42.5 bits (99), Expect = 2e-05
 Identities = 32/147 (21%), Positives = 52/147 (35%), Gaps = 8/147 (5%)

Query: 182 KPGMHVGVVGLGGLGHVAVKFAKAMGVKVTVISTSPSKKSEAIERLGADSFLVSRDQDEM 241
             G  V V G G +G V +  AKAMG    V++   + +    + +GAD  L    +   
Sbjct: 25  TLGHKVLVCGAGPIGMVTLLVAKAMGAAQVVVTDLSATRLSKAKEIGADLVLQISKESPQ 84

Query: 242 QAAM-------GTMDGIIDTVSAVHPLMPLIGLLKSQGKLVLVGAPEKPLELPAFSLLMG 294
           + A           +  I+   A   +   I   +S G LVLVG   +   +P     + 
Sbjct: 85  EIARKVEGQLGCKPEVTIECTGAEASIQAGIYATRSGGTLVLVGLGSEMTTVPLLHAAIR 144

Query: 295 RKIVGGSMIGGMKETQEMIDFAAKHNI 321
              + G            I   A  ++
Sbjct: 145 EVDIKGVF-RYCNTWPVAISMLASKSV 170

>d1yb5a2 c.2.1.1 (A:121-294) Quinone oxidoreductase {Human (Homo sapiens) [TaxId: 9606]} Length = 174

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Alcohol dehydrogenase-like, C-terminal domain
domain: Quinone oxidoreductase
species: Human (Homo sapiens) [TaxId: 9606]

 Score = 42.3 bits (98), Expect = 2e-05
 Identities = 27/159 (16%), Positives = 53/159 (33%), Gaps = 7/159 (4%)

Query: 162 APLLCAGITVYSPLRFYGLDKPGMHVGVVGLGGLGHVAVKFAKAMGVKVTVISTSPSKKS 221
           A +     T Y  L      K G  V V G  G   +A            + +    +  
Sbjct: 7   AAIGIPYFTAYRALIHSACVKAGESVLVHGASGGVGLAACQIARAYGLKILGTAGTEEGQ 66

Query: 222 EAIERLGADSFLVSRDQDEMQAAMGTM----DGIIDTVSAVHPLMPLIGLLKSQGKLVLV 277
           + + + GA      R+ + +      +      II  + A   L   + LL   G++++V
Sbjct: 67  KIVLQNGAHEVFNHREVNYIDKIKKYVGEKGIDIIIEMLANVNLSKDLSLLSHGGRVIVV 126

Query: 278 GAPEKPLELPAFSLLMGRKIVGGSMIGGM--KETQEMID 314
           G+    +E+     +     + G  +     +E Q+   
Sbjct: 127 GSRG-TIEINPRDTMAKESSIIGVTLFSSTKEEFQQYAA 164

>d1pqwa_ c.2.1.1 (A:) Putative enoyl reductase domain of polyketide synthase {Mycobacterium tuberculosis [TaxId: 1773]} Length = 183

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Alcohol dehydrogenase-like, C-terminal domain
domain: Putative enoyl reductase domain of polyketide synthase
species: Mycobacterium tuberculosis [TaxId: 1773]

 Score = 41.2 bits (95), Expect = 5e-05
 Identities = 29/178 (16%), Positives = 59/178 (33%), Gaps = 10/178 (5%)

Query: 162 APLLCAGITVYSPLRFYGLDKPGMHVGVVGLGGLGHVAVKFAKAMGVKVTVISTSPSKKS 221
           A    A +T +  L   G   PG  V +    G   +A      M       +     K 
Sbjct: 4   ATFGVAYLTAWHSLCEVGRLSPGERVLIHSATGGVGMAAVSIAKMIGARIYTTAGSDAKR 63

Query: 222 EAIERLGADSFLVSRDQDEMQAAMGTMDG----IIDTVSAVHPLMPLIGLLKSQGKLVLV 277
           E + RLG +    SR  D     +   DG    ++    A   +   + +L   G+ + +
Sbjct: 64  EMLSRLGVEYVGDSRSVDFADEILELTDGYGVDVVLNSLAGEAIQRGVQILAPGGRFIEL 123

Query: 278 GAPEKPLELPAFSLLMGRKI------VGGSMIGGMKETQEMIDFAAKHNIRADIEVIP 329
           G  +   +       + +        +  ++       ++++    +H     +EV+P
Sbjct: 124 GKKDVYADASLGLAALAKSASFSVVDLDLNLKLQPARYRQLLQHILQHVADGKLEVLP 181

>d1iz0a1 b.35.1.2 (A:1-98,A:270-302) Quinone oxidoreductase {Thermus thermophilus [TaxId: 274]} Length = 131

class: All beta proteins
fold: GroES-like
superfamily: GroES-like
family: Alcohol dehydrogenase-like, N-terminal domain
domain: Quinone oxidoreductase
species: Thermus thermophilus [TaxId: 274]

 Score = 39.4 bits (91), Expect = 1e-04
 Identities = 10/89 (11%), Positives = 27/89 (30%), Gaps = 5/89 (5%)

Query: 93  KVGVGCMVGSCRSCDSCAIDLENYCPKVIM-----TYANKYHDGTITYGGYSDIMVADEH 147
           +V    +  +       A     + P +           + +   +  GG ++ +   + 
Sbjct: 31  RVEAVGLNFADHLMRLGAYLTRLHPPFIPGMEVVGVVEGRRYAALVPQGGLAERVAVPKG 90

Query: 148 FVVRIPEGTPLDATAPLLCAGITVYSPLR 176
            ++ +PEG P+             +  L 
Sbjct: 91  ALLPLPEGRPVVGPVFPFAEAEAAFRALL 119

>d1gu7a2 c.2.1.1 (A:161-349) 2,4-dienoyl-CoA reductase {Yeast (Candida tropicalis) [TaxId: 5482]} Length = 189

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Alcohol dehydrogenase-like, C-terminal domain
domain: 2,4-dienoyl-CoA reductase
species: Yeast (Candida tropicalis) [TaxId: 5482]

 Score = 38.1 bits (87), Expect = 7e-04
 Identities = 21/163 (12%), Positives = 45/163 (27%), Gaps = 15/163 (9%)

Query: 162 APLLCAGITVYSPLRFYGLDKPGMHVGVVGL--GGLGHVAVKFAKAMGVKVTVISTSPSK 219
           A +    +T Y  L  Y    PG    +       +G  A +  K +      +      
Sbjct: 7   ATISVNPLTAYLMLTHYVKLTPGKDWFIQNGGTSAVGKYASQIGKLLNFNSISVIRDRPN 66

Query: 220 ---KSEAIERLGADSFLVSRDQDEMQ----------AAMGTMDGIIDTVSAVHPLMPLIG 266
                 +++ LGA   +     +  +           + G     ++ V           
Sbjct: 67  LDEVVASLKELGATQVITEDQNNSREFGPTIKEWIKQSGGEAKLALNCVGGKSSTGIARK 126

Query: 267 LLKSQGKLVLVGAPEKPLELPAFSLLMGRKIVGGSMIGGMKET 309
           L  +   L   G   +P+ +P    +       G  +  + + 
Sbjct: 127 LNNNGLMLTYGGMSFQPVTIPTSLYIFKNFTSAGFWVTELLKN 169

>d1kola2 c.2.1.1 (A:161-355) Formaldehyde dehydrogenase {Pseudomonas putida [TaxId: 303]} Length = 195

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Alcohol dehydrogenase-like, C-terminal domain
domain: Formaldehyde dehydrogenase
species: Pseudomonas putida [TaxId: 303]

 Score = 35.6 bits (81), Expect = 0.004
 Identities = 30/165 (18%), Positives = 52/165 (31%), Gaps = 23/165 (13%)

Query: 162 APLLCAGITVYSPLRFYGLDKPGMHVGVVGLGGLGHVAVKFAKAMGVKVTVISTSPSKKS 221
             L     T Y      G+  PG  V V G G +G  A   A+ +G  V ++      + 
Sbjct: 5   TCLSDILPTGYHGAVTAGV-GPGSTVYVAGAGPVGLAAAASARLLGAAVVIVGDLNPARL 63

Query: 222 EAIERLGADSFLVSRDQDEMQAAMGTMDG-----IIDTV---------------SAVHPL 261
              +  G +   +S D    +     +        +D V               +    L
Sbjct: 64  AHAKAQGFEIADLSLDTPLHEQIAALLGEPEVDCAVDAVGFEARGHGHEGAKHEAPATVL 123

Query: 262 MPLIGLLKSQGKLVLVG--APEKPLELPAFSLLMGRKIVGGSMIG 304
             L+ + +  GK+ + G    E P  + A + +    I  G    
Sbjct: 124 NSLMQVTRVAGKIGIPGLYVTEDPGAVDAAAKIGSLSIRFGLGWA 168

>d1o89a1 b.35.1.2 (A:1-115,A:293-323) Hypothetical protein YhdH {Escherichia coli [TaxId: 562]} Length = 146

class: All beta proteins
fold: GroES-like
superfamily: GroES-like
family: Alcohol dehydrogenase-like, N-terminal domain
domain: Hypothetical protein YhdH
species: Escherichia coli [TaxId: 562]

 Score = 35.2 bits (80), Expect = 0.004
 Identities = 20/136 (14%), Positives = 37/136 (27%), Gaps = 32/136 (23%)

Query: 36  GEKDVTFKVTHCGICHSDLHMIKNEWGNTIYPI-VPGHEIVGVVTEVGSKVSKFKVGDKV 94
            E DVT  V    + + D   I  +         +PG +  G V    S+  +F  G +V
Sbjct: 26  PEGDVTVDVHWSSLNYKDALAITGKGKIIRNFPMIPGIDFAGTVRT--SEDPRFHAGQEV 83

Query: 95  GVGCMVGSCRSCDSCAIDLENYCPKVIMTYANKYHDGTITYGGYSDIMVADEHFVVRIPE 154
            +                                      +GG ++       ++V +P+
Sbjct: 84  LLTGWGVGEN-----------------------------HWGGLAEQARVKGDWLVAMPQ 114

Query: 155 GTPLDATAPLLCAGIT 170
           G      +        
Sbjct: 115 GQAAKEISLSEAPNFA 130

Homologous Domains Detected by HHsearch

Original result of HHsearch against SCOP70(version1.75) database

ID	Length	Definition	Probability
Query	361
d1piwa1	192	Cinnamyl alcohol dehydrogenase, ADH6 {Baker's yeas	100.0
d1cdoa1	199	Alcohol dehydrogenase {Cod (Gadus callarias) [TaxI	100.0
d1llua1	175	Alcohol dehydrogenase {Pseudomonas aeruginosa [Tax	100.0
d1e3ja1	178	Ketose reductase (sorbitol dehydrogenase) {Silverl	100.0
d2fzwa1	197	Alcohol dehydrogenase {Human (Homo sapiens), diffe	100.0
d1h2ba1	171	Alcohol dehydrogenase {Archaeon Aeropyrum pernix [	100.0
d1f8fa1	194	Benzyl alcohol dehydrogenase {Acinetobacter calcoa	100.0
d1e3ia1	202	Alcohol dehydrogenase {Mouse (Mus musculus), class	100.0
d1vj0a1	184	Hypothetical protein TM0436 {Thermotoga maritima [	100.0
d1jqba1	177	Bacterial secondary alcohol dehydrogenase {Clostri	100.0
d1pl8a1	185	Ketose reductase (sorbitol dehydrogenase) {Human (	100.0
d1kola1	201	Formaldehyde dehydrogenase {Pseudomonas putida [Ta	100.0
d1rjwa1	171	Alcohol dehydrogenase {Bacillus stearothermophilus	99.98
d1uufa1	179	Hypothetical protein YahK {Escherichia coli [TaxId	99.98
d2jhfa1	198	Alcohol dehydrogenase {Horse (Equus caballus) [Tax	99.97
d1jvba1	177	Alcohol dehydrogenase {Archaeon Sulfolobus solfata	99.97
d1p0fa1	198	Alcohol dehydrogenase {Frog (Rana perezi) [TaxId:	99.97
d1yb5a1	150	Quinone oxidoreductase {Human (Homo sapiens) [TaxI	99.97
d1qora1	147	Quinone oxidoreductase {Escherichia coli [TaxId: 5	99.96
d1piwa2	168	Cinnamyl alcohol dehydrogenase, ADH6 {Baker's yeas	99.95
d1llua2	166	Alcohol dehydrogenase {Pseudomonas aeruginosa [Tax	99.95
d1xa0a1	152	B. subtilis YhfP homologue {Bacillus stearothermop	99.94
d1uufa2	168	Hypothetical protein YahK {Escherichia coli [TaxId	99.94
d1f8fa2	174	Benzyl alcohol dehydrogenase {Acinetobacter calcoa	99.94
d1rjwa2	168	Alcohol dehydrogenase {Bacillus stearothermophilus	99.94
d1yb5a2	174	Quinone oxidoreductase {Human (Homo sapiens) [TaxI	99.94
d1iz0a1	131	Quinone oxidoreductase {Thermus thermophilus [TaxI	99.94
d1jvba2	170	Alcohol dehydrogenase {Archaeon Sulfolobus solfata	99.93
d1e3ia2	174	Alcohol dehydrogenase {Mouse (Mus musculus), class	99.93
d1h2ba2	172	Alcohol dehydrogenase {Archaeon Aeropyrum pernix [	99.93
d1xa0a2	176	B. subtilis YhfP homologue {Bacillus stearothermop	99.93
d1pl8a2	171	Ketose reductase (sorbitol dehydrogenase) {Human (	99.93
d1vj0a2	182	Hypothetical protein TM0436 {Thermotoga maritima [	99.92
d1e3ja2	170	Ketose reductase (sorbitol dehydrogenase) {Silverl	99.92
d1o89a1	146	Hypothetical protein YhdH {Escherichia coli [TaxId	99.92
d1p0fa2	174	Alcohol dehydrogenase {Frog (Rana perezi) [TaxId:	99.92
d1tt7a1	162	Hypothetical protein YhfP {Bacillus subtilis [TaxI	99.92
d1iz0a2	171	Quinone oxidoreductase {Thermus thermophilus [TaxI	99.91
d1jqba2	174	Bacterial secondary alcohol dehydrogenase {Clostri	99.91
d2fzwa2	176	Alcohol dehydrogenase {Human (Homo sapiens), diffe	99.91
d1pqwa_	183	Putative enoyl reductase domain of polyketide synt	99.91
d1gu7a2	189	2,4-dienoyl-CoA reductase {Yeast (Candida tropical	99.91
d1gu7a1	175	2,4-dienoyl-CoA reductase {Yeast (Candida tropical	99.9
d1v3va2	182	Leukotriene b4 12-hydroxydehydrogenase/prostagland	99.9
d1cdoa2	175	Alcohol dehydrogenase {Cod (Gadus callarias) [TaxI	99.9
d2jhfa2	176	Alcohol dehydrogenase {Horse (Equus caballus) [Tax	99.89
d1qora2	179	Quinone oxidoreductase {Escherichia coli [TaxId: 5	99.89
d1d1ta2	176	Alcohol dehydrogenase {Human (Homo sapiens), diffe	99.89
d1vj1a2	187	Putative zinc-binding alcohol dehydrogenase {Mouse	99.87
d1o89a2	177	Hypothetical protein YhdH {Escherichia coli [TaxId	99.87
d1kola2	195	Formaldehyde dehydrogenase {Pseudomonas putida [Ta	99.85
d1tt7a2	167	Hypothetical protein YhfP {Bacillus subtilis [TaxI	99.84
d1vj1a1	166	Putative zinc-binding alcohol dehydrogenase {Mouse	99.63
d1v3va1	147	Leukotriene b4 12-hydroxydehydrogenase/prostagland	99.62
d1o8ca2	77	Hypothetical protein YhdH {Escherichia coli [TaxId	99.37
d1pjca1	168	L-alanine dehydrogenase {Phormidium lapideum [TaxI	98.45
d1luaa1	191	Methylene-tetrahydromethanopterin dehydrogenase {M	98.18
d1l7da1	183	Nicotinamide nucleotide transhydrogenase dI compon	98.17
d1q7ba_	243	beta-keto acyl carrier protein reductase {Escheric	98.03
d1hxha_	253	3beta/17beta hydroxysteroid dehydrogenase {Comamon	97.99
d1hdca_	254	3-alpha,20-beta-hydroxysteroid dehydrogenase {Stre	97.95
d1nffa_	244	Putative oxidoreductase Rv2002 {Mycobacterium tube	97.92
d1vl8a_	251	Gluconate 5-dehydrogenase {Thermotoga maritima [Ta	97.87
d1pr9a_	244	Carbonyl reductase {Human (Homo sapiens) [TaxId: 9	97.86
d2gdza1	254	15-hydroxyprostaglandin dehydrogenase, PGDH {Human	97.83
d1gpja2	159	Glutamyl tRNA-reductase middle domain {Archaeon Me	97.81
d2d1ya1	248	Hypothetical protein TTHA0369 {Thermus thermophilu	97.81
d1ulsa_	242	beta-keto acyl carrier protein reductase {Thermus	97.81
d1cyda_	242	Carbonyl reductase {Mouse (Mus musculus) [TaxId: 1	97.81
d1zema1	260	Xylitol dehydrogenase {Gluconobacter oxydans [TaxI	97.78
d1yb1a_	244	17-beta-hydroxysteroid dehydrogenase type XI {Huma	97.78
d1zk4a1	251	R-specific alcohol dehydrogenase {Lactobacillus br	97.77
d1k2wa_	256	Sorbitol dehydrogenase {Rhodobacter sphaeroides [T	97.74
d1xg5a_	257	Putative dehydrogenase ARPG836 (MGC4172) {Human (H	97.71
d2a4ka1	241	beta-keto acyl carrier protein reductase {Thermus	97.71
d2c07a1	251	beta-keto acyl carrier protein reductase {Malaria	97.67
d1iy8a_	258	Levodione reductase {Corynebacterium aquaticum [Ta	97.66
d1ydea1	250	Retinal dehydrogenase/reductase 3 {Human (Homo sap	97.65
d1nyta1	170	Shikimate 5-dehydrogenase AroE {Escherichia coli [	97.64
d1npya1	167	Shikimate 5-dehydrogenase-like protein HI0607 {Hae	97.63
d2bgka1	268	Rhizome secoisolariciresinol dehydrogenase {Mayapp	97.61
d2ae2a_	259	Tropinone reductase {Jimsonweed (Datura stramonium	97.61
d1wmaa1	275	Carbonyl reductase/20beta-hydroxysteroid dehydroge	97.6
d1bdba_	276	Cis-biphenyl-2,3-dihydrodiol-2,3-dehydrogenase {Ps	97.58
d1xq1a_	259	Tropinone reductase {Thale cress (Arabidopsis thal	97.58
d2ew8a1	247	(s)-1-phenylethanol dehydrogenase {Azoarcus sp. eb	97.57
d1x1ta1	260	D(-)-3-hydroxybutyrate dehydrogenase {Pseudomonas	97.55
d1dl5a1	213	Protein-L-isoaspartyl O-methyltransferase {Thermot	97.54
d1e5qa1	182	Saccharopine reductase {Rice blast fungus (Magnapo	97.53
d1li4a1	163	S-adenosylhomocystein hydrolase {Human (Homo sapie	97.47
d1pjqa1	113	Siroheme synthase CysG, domain 1 {Salmonella typhi	97.45
d1jg1a_	215	Protein-L-isoaspartyl O-methyltransferase {Archaeo	97.44
d2ag5a1	245	Dehydrogenase/reductase SDR family member 6, DHRS6	97.43
d1lssa_	132	Ktn Mja218 {Archaeon Methanococcus jannaschii [Tax	97.42
d1xu9a_	269	11-beta-hydroxysteroid dehydrogenase 1 {Human (Hom	97.39
d1gz6a_	302	(3R)-hydroxyacyl-CoA dehydrogenase domain of estra	97.37
d1yxma1	297	Peroxisomal trans 2-enoyl CoA reductase {Human (Ho	97.37
d1xkqa_	272	Hypothetical protein R05D8.7 {Caenorhabditis elega	97.35
d2jfga1	93	UDP-N-acetylmuramoyl-L-alanine:D-glutamate ligase	97.34
d1i1na_	224	Protein-L-isoaspartyl O-methyltransferase {Human (	97.34
d1ja9a_	259	1,3,6,8-tetrahydroxynaphthalene reductase {Rice bl	97.33
d1g0oa_	272	1,3,8-trihydroxynaphtalene reductase (THNR, naphto	97.32
d1ae1a_	258	Tropinone reductase {Jimsonweed (Datura stramonium	97.31
d1h5qa_	260	Mannitol dehydrogenase {Mushroom (Agaricus bisporu	97.29
d1spxa_	264	Glucose dehydrogenase (5l265) {Nematode (Caenorhab	97.28
d1fmca_	255	7-alpha-hydroxysteroid dehydrogenase {Escherichia	97.28
d1vbfa_	224	Protein-L-isoaspartyl O-methyltransferase {Sulfolo	97.26
d2rhca1	257	beta-keto acyl carrier protein reductase {Streptom	97.25
d1uzma1	237	beta-keto acyl carrier protein reductase {Mycobact	97.25
d1hdoa_	205	Biliverdin IX beta reductase {Human (Homo sapiens)	97.24
d1w6ua_	294	2,4-dienoyl-CoA reductase, mitochondrial (DECR) {H	97.24
d1xhla_	274	Hypothetical protein F25D1.5 {Caenorhabditis elega	97.24
d1ulua_	256	Enoyl-ACP reductase {Thermus thermophilus [TaxId:	97.2
d1sbya1	254	Drosophila alcohol dehydrogenase {Fly (Drosophila	97.19
d1dhra_	236	Dihydropteridin reductase (pteridine reductase) {R	97.19
d1vi2a1	182	Putative shikimate dehydrogenase YdiB {Escherichia	97.16
d1p77a1	171	Shikimate 5-dehydrogenase AroE {Haemophilus influe	97.09
d1bg6a2	184	N-(1-D-carboxylethyl)-L-norvaline dehydrogenase {A	97.09
d2bd0a1	240	Bacterial sepiapterin reductase {Chlorobium tepidu	97.06
d1o5ia_	234	beta-keto acyl carrier protein reductase {Thermoto	97.05
d1gega_	255	meso-2,3-butanediol dehydrogenase {Klebsiella pneu	97.04
d1geea_	261	Glucose dehydrogenase {Bacillus megaterium [TaxId:	97.04
d1v8ba1	163	S-adenosylhomocystein hydrolase {Plasmodium falcip	96.99
d1r18a_	223	Protein-L-isoaspartyl O-methyltransferase {Fruit f	96.94
d1ooea_	235	Dihydropteridin reductase (pteridine reductase) {N	96.94
d1zmta1	252	Halohydrin dehalogenase HheC {Agrobacterium tumefa	96.92
d1edoa_	244	beta-keto acyl carrier protein reductase {Oil seed	96.89
d1yb2a1	250	Hypothetical protein Ta0852 {Thermoplasma acidophi	96.81
d1b0aa1	166	Methylenetetrahydrofolate dehydrogenase/cyclohydro	96.8
d2o23a1	248	Type II 3-hydroxyacyl-CoA dehydrogenase {Human (Ho	96.73
d2ahra2	152	Pyrroline-5-carboxylate reductase ProC {Streptococ	96.72
d1yo6a1	250	Putative carbonyl reductase sniffer {Caenorhabditi	96.67
d2hmva1	134	Ktn bsu222 {Bacillus subtilis [TaxId: 1423]}	96.66
d2f1ka2	165	Prephenate dehydrogenase TyrA {Synechocystis sp. p	96.66
d1pjza_	201	Thiopurine S-methyltransferase {Pseudomonas syring	96.63
d1vpda2	161	Hydroxyisobutyrate dehydrogenase {Salmonella typhi	96.63
d2nxca1	254	PrmA-like protein TTHA0656 (TT0836) {Thermus therm	96.59
d1r0ka2	150	1-deoxy-D-xylulose-5-phosphate reductoisomerase {Z	96.54
d1g8aa_	227	Fibrillarin homologue {Archaeon Pyrococcus horikos	96.54
d1ps9a3	179	2,4-dienoyl-CoA reductase, middle domain {Escheric	96.52
d2pd4a1	274	Enoyl-ACP reductase {Helicobacter pylori [TaxId: 2	96.39
d1nkva_	245	Hypothetical Protein YjhP {Escherichia coli [TaxId	96.38
d1a4ia1	170	Methylenetetrahydrofolate dehydrogenase/cyclohydro	96.36
d1kpia_	291	CmaA2 {Mycobacterium tuberculosis [TaxId: 1773]}	96.34
d1yqga2	152	Pyrroline-5-carboxylate reductase ProC {Neisseria	96.31
d1oaaa_	259	Sepiapterin reductase {Mouse (Mus musculus) [TaxId	96.3
d1o54a_	266	Hypothetical protein TM0748 {Thermotoga maritima [	96.29
d1kpga_	285	CmaA1 {Mycobacterium tuberculosis [TaxId: 1773]}	96.28
d2bzga1	229	Thiopurine S-methyltransferase {Human (Homo sapien	96.21
d2q46a1	252	Hypothetical protein At5g02240 (T7H20_290) {Thale	96.16
d2fk8a1	280	Methoxy mycolic acid synthase 4, Mma4 {Mycobacteri	96.14
d2czca2	172	Glyceraldehyde-3-phosphate dehydrogenase (GAPDH) {	96.13
d3cuma2	162	Hydroxyisobutyrate dehydrogenase {Pseudomonas aeru	96.12
d1jtva_	285	Human estrogenic 17beta-hydroxysteroid dehydrogena	96.11
d1c1da1	201	Phenylalanine dehydrogenase {Rhodococcus sp., M4 [	96.1
d2o57a1	282	Putative sarcosine dimethylglycine methyltransfera	96.07
d2h7ma1	268	Enoyl-ACP reductase {Mycobacterium tuberculosis, T	96.04
d1j4aa1	197	D-lactate dehydrogenase {Lactobacillus helveticus	96.02
d1mx3a1	193	Transcription corepressor CtbP {Human (Homo sapien	96.0
d1dssg1	169	Glyceraldehyde-3-phosphate dehydrogenase (GAPDH) {	95.97
d1kjqa2	111	Glycinamide ribonucleotide transformylase PurT, N-	95.93
d1qp8a1	181	Putative formate dehydrogenase {Archaeon Pyrobacul	95.91
d2fr1a1	259	Erythromycin synthase, eryAI, 1st ketoreductase mo	95.89
d1xxla_	234	Hypothetical protein YcgJ {Bacillus subtilis [TaxI	95.81
d2g5ca2	171	Prephenate dehydrogenase TyrA {Aquifex aeolicus [T	95.78
d1b7go1	178	Glyceraldehyde-3-phosphate dehydrogenase (GAPDH) {	95.76
d1i9ga_	264	Probable methyltransferase Rv2118c {Mycobacterium	95.75
d1kyqa1	150	Bifunctional dehydrogenase/ferrochelatase Met8p, N	95.74
d1xeaa1	167	Putative oxidoreductase VCA1048 {Vibrio cholerae [	95.67
d2bkaa1	232	TAT-interacting protein TIP30 {Human (Homo sapiens	95.65
d1ygya1	184	Phosphoglycerate dehydrogenase {Mycobacterium tube	95.64
d1ydwa1	184	Probable oxidoreductase At4g09670 {Thale cress (Ar	95.6
d1mxha_	266	Dihydropteridin reductase (pteridine reductase) {T	95.6
d1gdha1	191	D-glycerate dehydrogenase {Hyphomicrobium methylov	95.59
d1g8sa_	230	Fibrillarin homologue {Archaeon Methanococcus jann	95.56
d1q0qa2	151	1-deoxy-D-xylulose-5-phosphate reductoisomerase {E	95.55
d1nt2a_	209	Fibrillarin homologue {Archaeon Archaeoglobus fulg	95.54
d1y1pa1	342	Aldehyde reductase II {Sporobolomyces salmonicolor	95.53
d2naca1	188	Formate dehydrogenase {Pseudomonas sp., strain 101	95.49
d2g82a1	168	Glyceraldehyde-3-phosphate dehydrogenase (GAPDH) {	95.44
d1ks9a2	167	Ketopantoate reductase PanE {Escherichia coli [Tax	95.4
d1snya_	248	Carbonyl reductase sniffer {Fruit fly (Drosophila	95.4
d1cf2o1	171	Glyceraldehyde-3-phosphate dehydrogenase (GAPDH) {	95.32
d1leha1	230	Leucine dehydrogenase {Bacillus sphaericus [TaxId:	95.29
d1ve3a1	226	Hypothetical protein PH0226 {Archaeon Pyrococcus h	95.29
d2avna1	246	Hypothetical methyltransferase TM1389 {Thermotoga	95.25
d1vl5a_	231	Hypothetical protein BH2331 {Bacillus halodurans [	95.25
d2pgda2	176	6-phosphogluconate dehydrogenase {Sheep (Ovis orie	95.24
d1gtea4	196	Dihydropyrimidine dehydrogenase, domain 2 {Pig (Su	95.2
d1nvta1	177	Shikimate 5-dehydrogenase AroE {Archaeon Methanoco	95.17
d1rkxa_	356	CDP-glucose-4,6-dehydratase {Yersinia pseudotuberc	95.16
d2b25a1	324	Hypothetical protein FLJ20628 {Human (Homo sapiens	95.12
d1edza1	171	Methylenetetrahydrofolate dehydrogenase/cyclohydro	95.05
d2c5aa1	363	GDP-mannose-3', 5'-epimerase {Thale cress (Arabido	95.03
d2pv7a2	152	Prephenate dehydrogenase TyrA {Haemophilus influen	94.94
d1id1a_	153	Rck domain from putative potassium channel Kch {Es	94.92
d2voua1	265	Dihydroxypyridine hydroxylase DhpH {Arthrobacter n	94.91
d1l3ia_	186	Precorrin-6Y methyltransferase (CbiT) {Archaeon Me	94.91
d1qsga_	258	Enoyl-ACP reductase {Escherichia coli [TaxId: 562]	94.88
d1nvmb1	157	Acetaldehyde dehydrogenase (acylating) {Pseudomona	94.84
d1zx0a1	229	Guanidinoacetate methyltransferase {Human (Homo sa	94.83
d1mo9a2	121	NADH-dependent 2-ketopropyl coenzyme M oxidoreduct	94.83
d2b69a1	312	UDP-glucuronate decarboxylase 1 {Human (Homo sapie	94.81
d1seza1	373	Protoporphyrinogen oxidase {Tobacco (Nicotiana tab	94.79
d1ebda2	117	Dihydrolipoamide dehydrogenase {Bacillus stearothe	94.76
d1p3da1	96	UDP-N-acetylmuramate-alanine ligase MurC {Haemophi	94.71
d1onfa2	117	Glutathione reductase {Plasmodium falciparum [TaxI	94.64
d1u8fo1	169	Glyceraldehyde-3-phosphate dehydrogenase (GAPDH) {	94.61
d1wdka3	186	Fatty oxidation complex alpha subunit, middle doma	94.59
d1bgva1	255	Glutamate dehydrogenase {Clostridium symbiosum [Ta	94.43
d1f0ya2	192	Short chain L-3-hydroxyacyl CoA dehydrogenase {Hum	94.42
d1e7wa_	284	Dihydropteridin reductase (pteridine reductase) {L	94.42
d3etja2	78	N5-carboxyaminoimidazole ribonucleotide synthetase	94.39
d1x7da_	340	Ornithine cyclodeaminase {Pseudomonas putida [TaxI	94.39
d1uh5a_	329	Enoyl-ACP reductase {Malaria parasite (Plasmodium	94.38
d1qyda_	312	Pinoresinol-lariciresinol reductase {Giant arborvi	94.38
d1p91a_	268	rRNA methyltransferase RlmA {Escherichia coli [Tax	94.37
d1vl0a_	281	DTDP-4-dehydrorhamnose reductase RfbD {Clostridium	94.33
d1udca_	338	Uridine diphosphogalactose-4-epimerase (UDP-galact	94.3
d2b4ro1	166	Glyceraldehyde-3-phosphate dehydrogenase (GAPDH) {	94.29
d1d7ya2	121	NADH-dependent ferredoxin reductase, BphA4 {Pseudo	94.24
d1jaya_	212	Coenzyme F420H2:NADP+ oxidoreductase (FNO) {Archae	94.24
d1nhpa2	123	NADH peroxidase {Enterococcus faecalis [TaxId: 135	94.22
d1pgja2	178	6-phosphogluconate dehydrogenase {Trypanosoma bruc	94.19
d1u2za_	406	Catalytic, N-terminal domain of histone methyltran	94.15
d1djqa3	233	Trimethylamine dehydrogenase, middle domain {Methy	94.12
d1i24a_	393	Sulfolipid biosynthesis protein SQD1 {Thale cress	94.08
d1gesa2	116	Glutathione reductase {Escherichia coli [TaxId: 56	94.04
d1pzga1	154	Lactate dehydrogenase {Toxoplasma gondii [TaxId: 5	94.0
d1orra_	338	CDP-tyvelose-2-epimerase {Salmonella typhi [TaxId:	93.97
d3lada2	119	Dihydrolipoamide dehydrogenase {Azotobacter vinela	93.96
d2iida1	370	L-aminoacid oxidase {Malayan pit viper (Calloselas	93.86
d1h6va2	122	Mammalian thioredoxin reductase {Rat (Rattus norve	93.86
d1v59a2	122	Dihydrolipoamide dehydrogenase {Baker's yeast (Sac	93.84
d1c0pa1	268	D-aminoacid oxidase, N-terminal domain {Rhodotorul	93.78
d1ldna1	148	Lactate dehydrogenase {Bacillus stearothermophilus	93.72
d1hdgo1	169	Glyceraldehyde-3-phosphate dehydrogenase (GAPDH) {	93.68
d1tw3a2	253	Carminomycin 4-O-methyltransferase {Streptomyces p	93.68
d1gado1	166	Glyceraldehyde-3-phosphate dehydrogenase (GAPDH) {	93.48
d1lvla2	115	Dihydrolipoamide dehydrogenase {Pseudomonas putida	93.45
d1q1ra2	133	Putidaredoxin reductase {Pseudomonas putida [TaxId	93.43
d1omoa_	320	Archaeal alanine dehydrogenase {Archaeon Archaeogl	93.43
d1ojta2	125	Dihydrolipoamide dehydrogenase {Neisseria meningit	93.34
d1dxla2	123	Dihydrolipoamide dehydrogenase {Garden pea (Pisum	93.32
d3grsa2	125	Glutathione reductase {Human (Homo sapiens) [TaxId	93.31
d2i6ga1	198	Putative methyltransferase TehB {Salmonella typhim	93.24
d1xvaa_	292	Glycine N-methyltransferase {Rat (Rattus norvegicu	93.21
d1im8a_	225	Hypothetical protein HI0319 (YecO) {Haemophilus in	93.15
d1zh8a1	181	Hypothetical protein TM0312 {Thermotoga maritima [	93.1
d1wzna1	251	Hypothetical methyltransferase PH1305 {Archaeon Py	93.05
d1sc6a1	188	Phosphoglycerate dehydrogenase {Escherichia coli [	93.0
d1qyca_	307	Phenylcoumaran benzylic ether reductase {Loblolly	92.97
d1n1ea2	189	Glycerol-3- phosphate dehydrogenase {Trypanosome (	92.95
d1obfo1	173	Glyceraldehyde-3-phosphate dehydrogenase (GAPDH) {	92.87
d2i76a2	153	Hypothetical protein TM1727 {Thermotoga maritima [	92.85
d1v9la1	242	Glutamate dehydrogenase {Pyrobaculum islandicum [T	92.83
d1dxya1	199	D-2-hydroxyisocaproate dehydrogenase {Lactobacillu	92.83
d1mv8a2	202	GDP-mannose 6-dehydrogenase {Pseudomonas aeruginos	92.82
d1j6ua1	89	UDP-N-acetylmuramate-alanine ligase MurC {Thermoto	92.82
d1k0ia1	292	p-Hydroxybenzoate hydroxylase, PHBH {Pseudomonas a	92.76
d1uaya_	241	Type II 3-hydroxyacyl-CoA dehydrogenase {Thermus t	92.72
d2fyta1	311	Protein arginine N-methyltransferase 3, PRMT3 {Hum	92.65
d2dw4a2	449	Lysine-specific histone demethylase 1, LSD1 {Human	92.54
d1z45a2	347	Uridine diphosphogalactose-4-epimerase (UDP-galact	92.35
d1txga2	180	Glycerol-3- phosphate dehydrogenase {Archaeoglobus	92.34
d1mlda1	144	Malate dehydrogenase {Pig (Sus scrofa) [TaxId: 982	92.34
d3c96a1	288	Monooxygenase PhzS {Pseudomonas aeruginosa [TaxId:	92.34
d1ez4a1	146	Lactate dehydrogenase {Lactobacillus pentosus [Tax	92.31
d1llda1	143	Lactate dehydrogenase {Bifidobacterium longum, str	92.24
d2blla1	342	Polymyxin resistance protein ArnA (PrmI) {Escheric	92.23
d2bi7a1	314	UDP-galactopyranose mutase, N-terminal domain {Kle	92.22
d1xgka_	350	Negative transcriptional regulator NmrA {Aspergill	92.2
d1n7ha_	339	GDP-mannose 4,6-dehydratase {Thale-cress (Arabidop	92.14
d1iy9a_	274	Spermidine synthase {Bacillus subtilis [TaxId: 142	92.03
d3cmco1	171	Glyceraldehyde-3-phosphate dehydrogenase (GAPDH) {	91.96
d1fcda1	186	Flavocytochrome c sulfide dehydrogenase, FCSD, fla	91.95
d1tlta1	164	Virulence factor MviM {Escherichia coli [TaxId: 56	91.89
d1i36a2	152	Conserved hypothetical protein MTH1747 {Archaeon M	91.85
d1i0za1	160	Lactate dehydrogenase {Human (Homo sapiens), heart	91.84
d2bhsa1	292	O-acetylserine sulfhydrylase (Cysteine synthase) {	91.78
d1db3a_	357	GDP-mannose 4,6-dehydratase {Escherichia coli [Tax	91.77
d1b26a1	234	Glutamate dehydrogenase {Thermotoga maritima [TaxI	91.74
d1b5qa1	347	Polyamine oxidase {Maize (Zea mays) [TaxId: 4577]}	91.74
d1yl7a1	135	Dihydrodipicolinate reductase {Mycobacterium tuber	91.72
d1fjha_	257	3-alpha-hydroxysteroid dehydrogenase {Comamonas te	91.68
d2i0za1	251	Flavoprotein BC4706 {Bacillus cereus [TaxId: 1396]	91.64
d1fl2a1	184	Alkyl hydroperoxide reductase subunit F (AhpF), C-	91.59
d1xhca2	122	NADH oxidase /nitrite reductase {Pyrococcus furios	91.58
d1rm4a1	172	Glyceraldehyde-3-phosphate dehydrogenase (GAPDH) {	91.56
d2gqfa1	253	Hypothetical protein HI0933 {Haemophilus influenza	91.55
d1k3ta1	190	Glyceraldehyde-3-phosphate dehydrogenase (GAPDH) {	91.44
d1np3a2	182	Class I ketol-acid reductoisomerase (KARI) {Pseudo	91.44
d2bcgg1	297	Guanine nucleotide dissociation inhibitor, GDI {Ba	91.28
d2b2ca1	312	Spermidine synthase {Caenorhabditis elegans [TaxId	91.26
d1dxla1	221	Dihydrolipoamide dehydrogenase {Garden pea (Pisum	91.21
d1a9xa3	127	Carbamoyl phosphate synthetase (CPS), large subuni	91.2
d2ivda1	347	Protoporphyrinogen oxidase {Myxococcus xanthus [Ta	91.14
d1trba1	190	Thioredoxin reductase {Escherichia coli [TaxId: 56	91.13
d2ldxa1	159	Lactate dehydrogenase {Mouse (Mus musculus) [TaxId	90.91
d1rpna_	321	GDP-mannose 4,6-dehydratase {Pseudomonas aeruginos	90.82
d1uxja1	142	Malate dehydrogenase {Chloroflexus aurantiacus [Ta	90.67
d1g6q1_	328	Arginine methyltransferase, HMT1 {Baker's yeast (S	90.64
d2fy8a1	129	Potassium channel-related protein MthK {Archaeon M	90.63
d1vm6a3	128	Dihydrodipicolinate reductase {Thermotoga maritima	90.52
d1hwxa1	293	Glutamate dehydrogenase {Cow (Bos taurus) [TaxId:	90.42
d1y8ca_	246	Putative methyltransferase CAC2371 {Clostridium ac	90.4
d1a5za1	140	Lactate dehydrogenase {Thermotoga maritima [TaxId:	90.3
d1w4xa1	298	Phenylacetone monooxygenase {Thermobifida fusca [T	90.25
d1oria_	316	Protein arginine N-methyltransferase 1, PRMT1 {Rat	90.19
d2o07a1	285	Spermidine synthase {Human (Homo sapiens) [TaxId:	90.18
d1d7oa_	297	Enoyl-ACP reductase {Oil seed rape (Brassica napus	90.1
d1gesa1	217	Glutathione reductase {Escherichia coli [TaxId: 56	90.04
d1xj5a_	290	Spermidine synthase {Thale cress (Arabidopsis thal	90.0
d1ryia1	276	Glycine oxidase ThiO {Bacillus sp. [TaxId: 1409]}	90.0
d1v59a1	233	Dihydrolipoamide dehydrogenase {Baker's yeast (Sac	89.95
d1h6da1	221	Glucose-fructose oxidoreductase, N-terminal domain	89.94
d1jw9b_	247	Molybdenum cofactor biosynthesis protein MoeB {Esc	89.89
d1nw3a_	328	Catalytic, N-terminal domain of histone methyltran	89.87
d1t4ba1	146	Aspartate beta-semialdehyde dehydrogenase {Escheri	89.8
d1ojta1	229	Dihydrolipoamide dehydrogenase {Neisseria meningit	89.75
d1d5ta1	336	Guanine nucleotide dissociation inhibitor, GDI {Co	89.7
d2frna1	260	Hypothetical protein PH0793 {Pyrococcus horikoshii	89.68
d1ri5a_	252	mRNA cap (Guanine N-7) methyltransferase {Fungus (	89.49
d1y6ja1	142	Lactate dehydrogenase {Clostridium thermocellum [T	89.47
d1q1ra1	185	Putidaredoxin reductase {Pseudomonas putida [TaxId	89.47
d1lvla1	220	Dihydrolipoamide dehydrogenase {Pseudomonas putida	89.46
d1ebda1	223	Dihydrolipoamide dehydrogenase {Bacillus stearothe	89.43
d2a35a1	212	Hypothetical protein PA4017 {Pseudomonas aeruginos	89.42
d2ex4a1	222	Adrenal gland protein AD-003 (C9orf32) {Human (Hom	89.36
d2v5za1	383	Monoamine oxidase B {Human (Homo sapiens) [TaxId:	89.28
d1t2da1	150	Lactate dehydrogenase {Malaria parasite (Plasmodiu	89.23
d1dlja2	196	UDP-glucose dehydrogenase (UDPGDH) {Streptococcus	89.21
d1jbqa_	355	Cystathionine beta-synthase {Human (Homo sapiens)	89.05
d1i8ta1	298	UDP-galactopyranose mutase, N-terminal domain {Esc	89.02
d1vdca1	192	Thioredoxin reductase {Mouse-ear cress (Arabidopsi	89.0
d1xtpa_	254	Hypothetical protein Lmaj004091aaa (LmjF30.0810) {	88.89
d2p7ia1	225	Hypothetical protein ECA1738 {Erwinia carotovora [	88.69
d1uira_	312	Spermidine synthase {Thermus thermophilus [TaxId:	88.66
d1pn0a1	360	Phenol hydroxylase {Soil-living yeast (Trichosporo	88.58
d2gf3a1	281	Sarcosine oxidase {Bacillus sp., strain b0618 [Tax	88.41
d1inla_	295	Spermidine synthase {Thermotoga maritima [TaxId: 2	88.35
d3lada1	229	Dihydrolipoamide dehydrogenase {Azotobacter vinela	88.35
d3grsa1	221	Glutathione reductase {Human (Homo sapiens) [TaxId	88.28
d1y0pa2	308	Flavocytochrome c3 (respiratory fumarate reductase	88.28
d2nvwa1	237	Galactose/lactose metabolism regulatory protein GA	88.21
d1a9xa4	121	Carbamoyl phosphate synthetase (CPS), large subuni	88.19
d1mjfa_	276	Putative spermidine synthetase PF0127 (SpeE) {Arch	87.96
d2gh1a1	281	Methyltransferase BC2162 {Bacillus cereus [TaxId:	87.93
d1f06a1	170	Diaminopimelic acid dehydrogenase (DAPDH) {Coryneb	87.83
d1feca2	117	Trypanothione reductase {Crithidia fasciculata [Ta	87.73
d1djqa2	156	Trimethylamine dehydrogenase, C-terminal domain {M	87.7
d1j5pa4	132	Hypothetical protein TM1643 {Thermotoga maritima [	87.67
d2gv8a1	335	Flavin-dependent monoxygenase SPBP16F5.08c {Schizo	87.51
d1ojua1	142	Malate dehydrogenase {Archaeon Archaeoglobus fulgi	87.5
d1cjca2	230	Adrenodoxin reductase of mitochondrial p450 system	87.36
d1e6ua_	315	GDP-4-keto-6-deoxy-d-mannose epimerase/reductase (	87.21
d1lqta2	239	Ferredoxin:NADP reductase FprA {Mycobacterium tube	87.19
d1n2sa_	298	dTDP-6-deoxy-L-lyxo-4-hexulose reductase (RmlD) {S	86.99
d1h6va1	235	Mammalian thioredoxin reductase {Rat (Rattus norve	86.76
d1dusa_	194	Hypothetical protein MJ0882 {Archaeon Methanococcu	86.63
d1qo8a2	317	Flavocytochrome c3 (respiratory fumarate reductase	86.48
d2cvoa1	183	Putative semialdehyde dehydrogenase {Rice (Oryza s	86.45
d1ek6a_	346	Uridine diphosphogalactose-4-epimerase (UDP-galact	86.38
d1qzza2	256	Aclacinomycin-10-hydroxylase RdmB {Streptomyces pu	86.35
d1hyha1	146	L-2-hydroxyisocapronate dehydrogenase, L-HICDH {La	86.13
d1gtea3	153	Dihydropyrimidine dehydrogenase, domain 3 {Pig (Su	86.13
d1pj5a2	305	N,N-dimethylglycine oxidase {Arthrobacter globifor	85.97
d2bs2a2	336	Fumarate reductase {Wolinella succinogenes [TaxId:	85.76
d1d4ca2	322	Flavocytochrome c3 (respiratory fumarate reductase	85.65
d1aoga2	117	Trypanothione reductase {Trypanosoma cruzi [TaxId:	85.46
d1sb8a_	341	UDP-N-acetylglucosamine 4-epimerase WbpP {Pseudomo	85.29
d1y7la1	310	O-acetylserine sulfhydrylase (Cysteine synthase) {	85.27
d1rp0a1	278	Thiazole biosynthetic enzyme Thi4 {Thale cress(Ara	85.25
d1tdja1	331	Threonine deaminase {Escherichia coli [TaxId: 562]	84.81
d2g17a1	179	N-acetyl-gamma-glutamyl-phosphate reductase ArgC {	84.22
d2cula1	230	GidA-related protein TTHA1897 {Thermus thermophilu	84.08
d1guza1	142	Malate dehydrogenase {Chlorobium vibrioforme [TaxI	84.0
d1onfa1	259	Glutathione reductase {Plasmodium falciparum [TaxI	83.82
d2gmha1	380	Electron transfer flavoprotein-ubiquinone oxidored	83.8
d1susa1	227	Caffeoyl-CoA O-methyltransferase {Alfalfa (Medicag	83.14
d1gtma1	239	Glutamate dehydrogenase {Archaeon Pyrococcus furio	83.12
d2as0a2	324	Hypothetical protein PH1915, middle and C-terminal	82.93
d1mo9a1	261	NADH-dependent 2-ketopropyl coenzyme M oxidoreduct	82.89
d1fcja_	302	O-acetylserine sulfhydrylase (Cysteine synthase) {	82.83
d2hjsa1	144	Usg-1 protein homolog PA3116 {Pseudomonas aerugino	82.74
d1ne2a_	197	Hypothetical protein Ta1320 {Archaeon Thermoplasma	82.72
d1kewa_	361	dTDP-glucose 4,6-dehydratase (RmlB) {Streptococcus	82.07
d1vkna1	176	N-acetyl-gamma-glutamyl-phosphate reductase ArgC {	81.88
d1t2aa_	347	GDP-mannose 4,6-dehydratase {Human (Homo sapiens)	81.74
d1p3ha_	99	Chaperonin-10 (GroES) {Mycobacterium tuberculosis	81.03
d1obba1	171	Alpha-glucosidase AglA {Thermotoga maritima [TaxId	80.91
d1z7wa1	320	O-acetylserine sulfhydrylase (Cysteine synthase) {	80.88
d1qmga2	226	Class II ketol-acid reductoisomerase (KARI) {Spina	80.59
d2gz1a1	154	Aspartate beta-semialdehyde dehydrogenase {Strepto	80.32

>d1piwa1 b.35.1.2 (A:1-152,A:321-360) Cinnamyl alcohol dehydrogenase, ADH6 {Baker's yeast (Saccharomyces cerevisiae) [TaxId: 4932]}

class: All beta proteins
fold: GroES-like
superfamily: GroES-like
family: Alcohol dehydrogenase-like, N-terminal domain
domain: Cinnamyl alcohol dehydrogenase, ADH6
species: Baker's yeast (Saccharomyces cerevisiae) [TaxId: 4932]

Probab=100.00  E-value=2.4e-36  Score=253.58  Aligned_cols=183  Identities=32%  Similarity=0.567  Sum_probs=161.8

Q ss_pred             CCcccceeeeeecCCCCCccceeeccCCCCCCeEEEEEeeeccCcchHHhHhcCCCCCCCCCcccccccEEEEEeCCCC-
Q 018067            7 QEHPKNAFGWAAKDTSGVLSPFHFSRRATGEKDVTFKVTHCGICHSDLHMIKNEWGNTIYPIVPGHEIVGVVTEVGSKV-   85 (361)
Q Consensus         7 ~~~~~~~~~~~~~~~~~~l~~~~~~~p~~~~~evlV~v~~~~i~~~D~~~~~g~~~~~~~p~~lG~e~~G~Vv~vG~~v-   85 (361)
                      .|.+|+++++...+....+++.+++.++++++||||||+++|||++|++.+.|.++...+|+++|||++|+|+++|+++ 
T Consensus         3 ~P~~~ka~~~~~~~~~~~~~~~~~~p~p~~~~eVlVkv~a~giC~sDl~~~~g~~~~~~~P~i~GHE~~G~Vv~vG~~v~   82 (192)
T d1piwa1           3 YPEKFEGIAIQSHEDWKNPKKTKYDPKPFYDHDIDIKIEACGVCGSDIHCAAGHWGNMKMPLVVGHEIVGKVVKLGPKSN   82 (192)
T ss_dssp             TTTCEEEEEECCSSSTTSCEEEEECCCCCCTTEEEEEEEEEEECHHHHHHHTTTTSCCCSSEECCCCEEEEEEEECTTCC
T ss_pred             CCceeEEEEEeCCCcCCcceEeeccCCCCCCCeEEEEEeeeCCCcchHHHHcCCCCCCCCCcCcccccccchhhcccccc
Confidence            3556777777666666777888888788899999999999999999999999988878899999999999999999988 


Q ss_pred             CCCCCCCEEEeccccCCCCCCcccccCCCCCCcchhcccccccCCCCcCCCcceeEEeecCCceEECCCCCCcccccccc
Q 018067           86 SKFKVGDKVGVGCMVGSCRSCDSCAIDLENYCPKVIMTYANKYHDGTITYGGYSDIMVADEHFVVRIPEGTPLDATAPLL  165 (361)
Q Consensus        86 ~~~~~GdrV~~~~~~~~c~~c~~c~~~~~~~c~~~~~~~~~~~~~~~~~~g~~a~~v~v~~~~~~~ip~~~~~~~aa~l~  165 (361)
                      +.+++||||++.+....|+.|.+|..+.+++|.+....+......|...+|+|+||+.+++++++++|+++++++|+.+.
T Consensus        83 ~~~k~GdrV~~~~~~~~c~~c~~c~~g~~~~C~~~~~~~~~~~~~G~~~~Ggfaey~~v~~~~~~~iP~~l~~e~Aal~~  162 (192)
T d1piwa1          83 SGLKVGQRVGVGAQVFSCLECDRCKNDNEPYCTKFVTTYSQPYEDGYVSQGGYANYVRVHEHFVVPIPENIWVETLPVGE  162 (192)
T ss_dssp             SSCCTTCEEEECSEEECCSCSHHHHTTCGGGCTTCEESSSCBCTTSCBCCCSSBSEEEEEGGGEEECCTTCCEEEEESSH
T ss_pred             cccCCCCeeeEeeeccCCCCchhhhcCCcccccccccccccccccccccccceeeEEEeehHHeEECCCCCCHHHHHHHH
Confidence            56999999999999999999999999999999998777777777788889999999999999999999999998877665


Q ss_pred             hhhhhhhhHhhhcCCCCCCCEEEEE
Q 018067          166 CAGITVYSPLRFYGLDKPGMHVGVV  190 (361)
Q Consensus       166 ~~~~ta~~~l~~~~~~~~g~~vlV~  190 (361)
                      +.+.|||+++.+ +.+++|++|||+
T Consensus       163 ~~~~ta~~~l~~-~~vk~g~~Vvv~  186 (192)
T d1piwa1         163 AGVHEAFERMEK-GDVRYRFTLVGY  186 (192)
T ss_dssp             HHHHHHHHHHHH-TCCSSEEEEECC
T ss_pred             HHHHHHHHHHHH-hCCCCCCEEEEE
Confidence            557799999975 679999999985

>d1cdoa1 b.35.1.2 (A:1-164,A:340-374) Alcohol dehydrogenase {Cod (Gadus callarias) [TaxId: 8053]}

class: All beta proteins
fold: GroES-like
superfamily: GroES-like
family: Alcohol dehydrogenase-like, N-terminal domain
domain: Alcohol dehydrogenase
species: Cod (Gadus callarias) [TaxId: 8053]

Probab=100.00  E-value=6.2e-36  Score=253.43  Aligned_cols=182  Identities=20%  Similarity=0.242  Sum_probs=156.0

Q ss_pred             CcccceeeeeecCCCCCccceeeccCCCCCCeEEEEEeeeccCcchHHhHhcCCCCCCCCCcccccccEEEEEeCCCCCC
Q 018067            8 EHPKNAFGWAAKDTSGVLSPFHFSRRATGEKDVTFKVTHCGICHSDLHMIKNEWGNTIYPIVPGHEIVGVVTEVGSKVSK   87 (361)
Q Consensus         8 ~~~~~~~~~~~~~~~~~l~~~~~~~p~~~~~evlV~v~~~~i~~~D~~~~~g~~~~~~~p~~lG~e~~G~Vv~vG~~v~~   87 (361)
                      +.+||+.+...++....|++++++.|+|+++||||||.++|||++|++.+.+......+|.++|||++|+|+++|+++++
T Consensus         4 ~~~~~~kAav~~~~~~pl~i~ev~~P~p~~~eVlIkv~a~giCgsD~~~~~g~~~~~~~p~i~GhE~~G~v~~vG~~v~~   83 (199)
T d1cdoa1           4 GKVIKCKAAVAWEANKPLVIEEIEVDVPHANEIRIKIIATGVCHTDLYHLFEGKHKDGFPVVLGHEGAGIVESVGPGVTE   83 (199)
T ss_dssp             TSCEEEEEEEBCSTTSCCEEEEEEECCCCTTEEEEEEEEEECCHHHHHHHHTTCCTTSCSEECCCCEEEEEEEECTTCCS
T ss_pred             CCceEEEEEEEecCCCCcEEEEEECCCCCCCEEEEEEEEEEEecchhhhhhhcccccccccccccccceEEEEEcCCCce
Confidence            34566555555444455999999999999999999999999999999999997776788999999999999999999999


Q ss_pred             CCCCCEEEeccccCCCCCCcccccCCCCCCcchhccccccc-CCC-------------CcCCCcceeEEeecCCceEECC
Q 018067           88 FKVGDKVGVGCMVGSCRSCDSCAIDLENYCPKVIMTYANKY-HDG-------------TITYGGYSDIMVADEHFVVRIP  153 (361)
Q Consensus        88 ~~~GdrV~~~~~~~~c~~c~~c~~~~~~~c~~~~~~~~~~~-~~~-------------~~~~g~~a~~v~v~~~~~~~ip  153 (361)
                      |++||||++.+.. +|++|.+|..+.++.|.+......... ..+             ....|+|+||+.++++++++||
T Consensus        84 ~~~GdrV~~~~~~-~cg~c~~C~~g~~~~C~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~~Ggfaey~~v~~~~~~~iP  162 (199)
T d1cdoa1          84 FQPGEKVIPLFIS-QCGECRFCQSPKTNQCVKGWANESPDVMSPKETRFTCKGRKVLQFLGTSTFSQYTVVNQIAVAKID  162 (199)
T ss_dssp             CCTTCEEEECSSC-CCSSSHHHHCTTCCCCSCSGGGTCTTTTSCSCCCEEETTEEEEEGGGTCCSBSEEEEEGGGEEECC
T ss_pred             ecCCCEEEEeeec-cccccccccCCCcccccccccccccccccCcccceeeccceeecccccCCceEEEEEchHHEEECC
Confidence            9999999887665 999999999999999998644432221 111             1235999999999999999999


Q ss_pred             CCCCcccccccchhhhhhhhHhhhcCCCCCCCEEEEE
Q 018067          154 EGTPLDATAPLLCAGITVYSPLRFYGLDKPGMHVGVV  190 (361)
Q Consensus       154 ~~~~~~~aa~l~~~~~ta~~~l~~~~~~~~g~~vlV~  190 (361)
                      ++++++++|++.+++.|++.++...+..+.|++|||+
T Consensus       163 ~~~~~~~aa~l~~~l~t~~~av~~~~~~~~G~tVlv~  199 (199)
T d1cdoa1         163 PSVKLDEFITHRMPLESVNDAIDLMKHGKCIRTVLSL  199 (199)
T ss_dssp             TTSCCGGGEEEEEEGGGHHHHHHHHHTTCCSEEEEEC
T ss_pred             CCCCHHHHHHHHHHHHHHHHHHHHhCCCCCCCEEEeC
Confidence            9999999999999999999999998888999999984

>d1llua1 b.35.1.2 (A:2-143,A:310-342) Alcohol dehydrogenase {Pseudomonas aeruginosa [TaxId: 287]}

class: All beta proteins
fold: GroES-like
superfamily: GroES-like
family: Alcohol dehydrogenase-like, N-terminal domain
domain: Alcohol dehydrogenase
species: Pseudomonas aeruginosa [TaxId: 287]

Probab=100.00  E-value=5.7e-35  Score=242.89  Aligned_cols=174  Identities=28%  Similarity=0.464  Sum_probs=154.1

Q ss_pred             CCCcccceeeeeecCCCCCccceeeccCCCCCCeEEEEEeeeccCcchHHhHhcCCCC-CCCCCcccccccEEEEEeCCC
Q 018067            6 EQEHPKNAFGWAAKDTSGVLSPFHFSRRATGEKDVTFKVTHCGICHSDLHMIKNEWGN-TIYPIVPGHEIVGVVTEVGSK   84 (361)
Q Consensus         6 ~~~~~~~~~~~~~~~~~~~l~~~~~~~p~~~~~evlV~v~~~~i~~~D~~~~~g~~~~-~~~p~~lG~e~~G~Vv~vG~~   84 (361)
                      ++|.+||++.+..++.|  ++++++|.|.|+++||||||+++|||++|++.++|.++. ..+|.++|||++|+|+++|++
T Consensus         1 ~~P~tMkA~v~~~~g~p--l~l~evp~P~~~~~evlVkv~a~gic~~D~~~~~G~~~~~~~~P~i~GhE~~G~V~~~G~~   78 (175)
T d1llua1           1 TLPQTMKAAVVHAYGAP--LRIEEVKVPLPGPGQVLVKIEASGVCHTDLHAAEGDWPVKPPLPFIPGHEGVGYVAAVGSG   78 (175)
T ss_dssp             CCCSEEEEEEBCSTTSC--CEEEEEECCCCCTTCEEEEEEEEECCHHHHHHHHTCSSSCCCSSBCCCSCEEEEEEEECTT
T ss_pred             CcchhcEEEEEEeCCCC--CEEEEeECCCCCCCEEEEEEEEecCcccchhhhccCccccccCCcCCCCcceEEEEEeCCC
Confidence            35778888887665444  889999999999999999999999999999999997753 578999999999999999999


Q ss_pred             CCCCCCCCEEEeccccCCCCCCcccccCCCCCCcchhcccccccCCCCcCCCcceeEEeecCCceEECCCCCCccccccc
Q 018067           85 VSKFKVGDKVGVGCMVGSCRSCDSCAIDLENYCPKVIMTYANKYHDGTITYGGYSDIMVADEHFVVRIPEGTPLDATAPL  164 (361)
Q Consensus        85 v~~~~~GdrV~~~~~~~~c~~c~~c~~~~~~~c~~~~~~~~~~~~~~~~~~g~~a~~v~v~~~~~~~ip~~~~~~~aa~l  164 (361)
                      +++|++||||++.+....|+.|.+|..+.++.|.+....       |...+|+|+||+.+++++++++|++++++.++.+
T Consensus        79 v~~~~~GdrV~~~~~~~~~g~~~~~~~g~~~~~~~~~~~-------G~~~~gg~aey~~v~~~~~~~iPd~l~~~~a~~~  151 (175)
T d1llua1          79 VTRVKEGDRVGIPWLYTACGCCEHCLTGWETLCESQQNT-------GYSVNGGYAEYVLADPNYVGILPKNVKATIHPGK  151 (175)
T ss_dssp             CCSCCTTCEEEECSEEECCSSSHHHHTTCGGGCTTCEEB-------TTTBCCSSBSEEEECTTTSEECCTTCCCCEEEEC
T ss_pred             ccccccCCEEEeccccccCCccccccCCccccccccccc-------ccccccccceEEEechHHEEECCCCCChhHHHHH
Confidence            999999999999888889999999999999999986543       5567899999999999999999999999999888


Q ss_pred             chhhhhhhhHhhhcCCCCCCCEEEEE
Q 018067          165 LCAGITVYSPLRFYGLDKPGMHVGVV  190 (361)
Q Consensus       165 ~~~~~ta~~~l~~~~~~~~g~~vlV~  190 (361)
                      .+++.|+++.++ .+. .+|++|||+
T Consensus       152 ~~~~~t~~~~~~-~g~-~~G~~VLVl  175 (175)
T d1llua1         152 LDDINQILDQMR-AGQ-IEGRIVLEM  175 (175)
T ss_dssp             GGGHHHHHHHHH-TTC-CSSEEEEEC
T ss_pred             HhHHHHHHHHHH-hCC-CCCCEEEeC
Confidence            888999988875 343 579999984

>d1e3ja1 b.35.1.2 (A:4-142,A:313-351) Ketose reductase (sorbitol dehydrogenase) {Silverleaf whitefly (Bemisia argentifolii) [TaxId: 77855]}

class: All beta proteins
fold: GroES-like
superfamily: GroES-like
family: Alcohol dehydrogenase-like, N-terminal domain
domain: Ketose reductase (sorbitol dehydrogenase)
species: Silverleaf whitefly (Bemisia argentifolii) [TaxId: 77855]

Probab=100.00  E-value=1.7e-35  Score=246.73  Aligned_cols=164  Identities=23%  Similarity=0.324  Sum_probs=145.8

Q ss_pred             CCCCccceeeccCCCCCCeEEEEEeeeccCcchHHhHhcCCC---CCCCCCcccccccEEEEEeCCCCCCCCCCCEEEec
Q 018067           21 TSGVLSPFHFSRRATGEKDVTFKVTHCGICHSDLHMIKNEWG---NTIYPIVPGHEIVGVVTEVGSKVSKFKVGDKVGVG   97 (361)
Q Consensus        21 ~~~~l~~~~~~~p~~~~~evlV~v~~~~i~~~D~~~~~g~~~---~~~~p~~lG~e~~G~Vv~vG~~v~~~~~GdrV~~~   97 (361)
                      +|++|+++++|.|+|+++|||||++++|||++|++.+++...   ...+|+++|||++|+|+++|+++++|++||||++.
T Consensus         9 g~~~l~~~e~~~P~~~~~evlVkv~a~gic~sD~~~~~~~~~~~~~~~~p~i~GhE~~G~Vv~vG~~v~~~~~GdrV~~~   88 (178)
T d1e3ja1           9 KQNDLRLEQRPIPEPKEDEVLLQMAYVGICGSDVHYYEHGRIADFIVKDPMVIGHEASGTVVKVGKNVKHLKKGDRVAVE   88 (178)
T ss_dssp             ETTEEEEEECCCCCCCTTEEEEEEEEEEECHHHHHHHHHSBSSSCBCCSCEECCCEEEEEEEEECTTCCSCCTTCEEEEC
T ss_pred             cCCcEEEEEeECCCCCCCEEEEEEEEEcccCchhhhhccCccccccccCCeeeccccceEEEecCcccCCCCCCCEEEEC
Confidence            467799999999999999999999999999999998887432   23668899999999999999999999999999887


Q ss_pred             cccCCCCCCcccccCCCCCCcchhcccccccCCCCcCCCcceeEEeecCCceEECCCCCCcccccccchhhhhhhhHhhh
Q 018067           98 CMVGSCRSCDSCAIDLENYCPKVIMTYANKYHDGTITYGGYSDIMVADEHFVVRIPEGTPLDATAPLLCAGITVYSPLRF  177 (361)
Q Consensus        98 ~~~~~c~~c~~c~~~~~~~c~~~~~~~~~~~~~~~~~~g~~a~~v~v~~~~~~~ip~~~~~~~aa~l~~~~~ta~~~l~~  177 (361)
                      +.. .|+.|.+|..+.+++|++..+..      +...+|+|+||+.+++++++++|+++++++|+++++.+.|||+++++
T Consensus        89 ~~~-~~~~c~~c~~g~~~~c~~~~~~~------~~~~~G~~aey~~v~~~~~~~iP~~~~~~~aa~~~~~~~ta~~a~~~  161 (178)
T d1e3ja1          89 PGV-PCRRCQFCKEGKYNLCPDLTFCA------TPPDDGNLARYYVHAADFCHKLPDNCNVKQLVTHSFKLEQTVDAFEA  161 (178)
T ss_dssp             CEE-CCSSSHHHHTTCGGGCTTCEETT------BTTBCCSCBSEEEEEGGGEEECCTTCCCGGGEEEEEEGGGHHHHHHH
T ss_pred             ccc-ccCCccccccCCcccccccccee------ccccccccceeeeecccceeeCCCCCCHHHHHHHHhHHHHHHHHHHH
Confidence            766 89999999999999998865431      23467999999999999999999999999999999999999999975


Q ss_pred             cCCCCCCCEEEEEcC
Q 018067          178 YGLDKPGMHVGVVGL  192 (361)
Q Consensus       178 ~~~~~~g~~vlV~Ga  192 (361)
                      . ++++|++|+|+|+
T Consensus       162 ~-~~~~g~~VlVig~  175 (178)
T d1e3ja1         162 A-RKKADNTIKVMIS  175 (178)
T ss_dssp             H-HHCCTTCSEEEEE
T ss_pred             h-CCCCCCEEEEEcc
Confidence            4 5899999999875

>d2fzwa1 b.35.1.2 (A:1-162,A:339-373) Alcohol dehydrogenase {Human (Homo sapiens), different isozymes [TaxId: 9606]}

class: All beta proteins
fold: GroES-like
superfamily: GroES-like
family: Alcohol dehydrogenase-like, N-terminal domain
domain: Alcohol dehydrogenase
species: Human (Homo sapiens), different isozymes [TaxId: 9606]

Probab=100.00  E-value=3.9e-34  Score=241.49  Aligned_cols=180  Identities=19%  Similarity=0.227  Sum_probs=152.0

Q ss_pred             ccceeeeeecCCCCCccceeeccCCCCCCeEEEEEeeeccCcchHHhHhcCCCCCCCCCcccccccEEEEEeCCCCCCCC
Q 018067           10 PKNAFGWAAKDTSGVLSPFHFSRRATGEKDVTFKVTHCGICHSDLHMIKNEWGNTIYPIVPGHEIVGVVTEVGSKVSKFK   89 (361)
Q Consensus        10 ~~~~~~~~~~~~~~~l~~~~~~~p~~~~~evlV~v~~~~i~~~D~~~~~g~~~~~~~p~~lG~e~~G~Vv~vG~~v~~~~   89 (361)
                      .||+.++...+..+.|+++++|.|+|+++||||||+++|||++|+++++|.+....+|.++|||++|+|+++|++|++++
T Consensus         4 ~~~~kAav~~~~g~~l~i~evp~P~p~~~eVLVkv~a~gic~sD~~~~~G~~~~~~~p~v~GhE~~G~V~~vG~~V~~~~   83 (197)
T d2fzwa1           4 VIKCKAAVAWEAGKPLSIEEIEVAPPKAHEVRIKIIATAVCHTDAYTLSGADPEGCFPVILGHLGAGIVESVGEGVTKLK   83 (197)
T ss_dssp             CEEEEEEEBCSTTSCCEEEEEEECCCCTTEEEEEEEEEECCHHHHHHHHTCCTTCCSSBCCCCEEEEEEEEECTTCCSCC
T ss_pred             ceEEEEEEEccCCCCCEEEEEECCCCCCCEEEEEEEEecCCCCcHHHHcCCcccccccccCCcceeeEEEeecCCceecC
Confidence            34555555544445599999999999999999999999999999999999877778999999999999999999999999


Q ss_pred             CCCEEEeccccCCCCCCcccccCCCCCCcchhccccccc--------------CCCCcCCCcceeEEeecCCceEECCCC
Q 018067           90 VGDKVGVGCMVGSCRSCDSCAIDLENYCPKVIMTYANKY--------------HDGTITYGGYSDIMVADEHFVVRIPEG  155 (361)
Q Consensus        90 ~GdrV~~~~~~~~c~~c~~c~~~~~~~c~~~~~~~~~~~--------------~~~~~~~g~~a~~v~v~~~~~~~ip~~  155 (361)
                      +||||++.+.. +|+.|.+|..+.++.|.+.......+.              ..+....|+|+||+.+++.+++++|++
T Consensus        84 ~GdrV~v~~~~-~cg~c~~c~~g~~~~C~~~~~~~~~~~~~~~~~~~~~~g~~v~~~~g~GgfAey~vvp~~~~~~vp~~  162 (197)
T d2fzwa1          84 AGDTVIPLYIP-QCGECKFCLNPKTNLCQKIRVTQGKGLMPDGTSRFTCKGKTILHYMGTSTFSEYTVVADISVAKIDPL  162 (197)
T ss_dssp             TTCEEEECSSC-CCSCSHHHHCTTCCCCCTTHHHHHTTCCTTSCCSEEETTEEEBCCTTTCCSBSEEEEEGGGEEECCTT
T ss_pred             CCCEEEEcccc-ccccccccccCccccCccccccccccccCCccceeccCCcceecccccccceeEEEechHHEEECCCC
Confidence            99999887765 999999999999999987532221111              112233599999999999999999999


Q ss_pred             CCcccccccchhhhhhhhHhhhcCCCCCCCEEEEE
Q 018067          156 TPLDATAPLLCAGITVYSPLRFYGLDKPGMHVGVV  190 (361)
Q Consensus       156 ~~~~~aa~l~~~~~ta~~~l~~~~~~~~g~~vlV~  190 (361)
                      +++++||++++++.|++.++.....-+.+++|||+
T Consensus       163 l~~~~aa~~~~~~~t~~~a~~~~~~g~~~~tvvvi  197 (197)
T d2fzwa1         163 IKVDEFVTHNLSFDEINKAFELMHSGKSIRTVVKI  197 (197)
T ss_dssp             SCSGGGEEEEEEGGGHHHHHHHHHHTCCSEEEEEC
T ss_pred             CCHHHHhhhhhHHHHHHHHHHhccCCCcCCEEEeC
Confidence            99999999999999999998766655788999884

>d1h2ba1 b.35.1.2 (A:17-154,A:327-359) Alcohol dehydrogenase {Archaeon Aeropyrum pernix [TaxId: 56636]}

class: All beta proteins
fold: GroES-like
superfamily: GroES-like
family: Alcohol dehydrogenase-like, N-terminal domain
domain: Alcohol dehydrogenase
species: Archaeon Aeropyrum pernix [TaxId: 56636]

Probab=100.00  E-value=3.8e-34  Score=236.50  Aligned_cols=166  Identities=24%  Similarity=0.388  Sum_probs=145.5

Q ss_pred             ceeeeeecCCCCCccceeeccCCC-CCCeEEEEEeeeccCcchHHhHhcCCC---CCCCCCcccccccEEEEEeCCCCCC
Q 018067           12 NAFGWAAKDTSGVLSPFHFSRRAT-GEKDVTFKVTHCGICHSDLHMIKNEWG---NTIYPIVPGHEIVGVVTEVGSKVSK   87 (361)
Q Consensus        12 ~~~~~~~~~~~~~l~~~~~~~p~~-~~~evlV~v~~~~i~~~D~~~~~g~~~---~~~~p~~lG~e~~G~Vv~vG~~v~~   87 (361)
                      |+..+..++.|  |++++++.|++ .++||||||.+++||++|++.++|..+   .+.+|.++|||++|+|+++|+++++
T Consensus         1 kA~~~~~~g~p--l~i~~v~~P~~~~~~eVlVkv~a~gic~sD~~~~~g~~~~~~~~~~P~v~GhE~~G~V~~vG~~v~~   78 (171)
T d1h2ba1           1 KAARLHEYNKP--LRIEDVDYPRLEGRFDVIVRIAGAGVCHTDLHLVQGMWHELLQPKLPYTLGHENVGYIEEVAEGVEG   78 (171)
T ss_dssp             CEEEESSTTSC--CEEECCCCCCCBTTBCEEEEEEEEECCHHHHHHHHTTTHHHHCCCSSEECCCCEEEEEEEECTTCCS
T ss_pred             CEEEEEeCCCC--CEEEEeeCCCCCCCCEEEEEEEecccceeeehccCCCcccccCCccccccceeeeeeeecccCCCCc
Confidence            34555554444  88999999986 589999999999999999999988764   3477999999999999999999999


Q ss_pred             CCCCCEEEeccccCCCCCCcccccCCCCCCcchhcccccccCCCCcCCCcceeEEeecCCceEECCCCCCcccccccchh
Q 018067           88 FKVGDKVGVGCMVGSCRSCDSCAIDLENYCPKVIMTYANKYHDGTITYGGYSDIMVADEHFVVRIPEGTPLDATAPLLCA  167 (361)
Q Consensus        88 ~~~GdrV~~~~~~~~c~~c~~c~~~~~~~c~~~~~~~~~~~~~~~~~~g~~a~~v~v~~~~~~~ip~~~~~~~aa~l~~~  167 (361)
                      |++||||++.+.. +|++|.+|..+.+++|.+..+.       |...+|+|+||+.++.++++++|++++++.++++.++
T Consensus        79 ~~~GdrV~~~~~~-~cg~~~~c~~g~~~~c~~~~~~-------g~~~~G~~aey~~v~~~~~~~iP~~~~~e~aa~~~~~  150 (171)
T d1h2ba1          79 LEKGDPVILHPAV-TDGTCLACRAGEDMHCENLEFP-------GLNIDGGFAEFMRTSHRSVIKLPKDVRVEVDIHKLDE  150 (171)
T ss_dssp             CCTTCEEEECSCB-CCSCSHHHHTTCGGGCTTCBCB-------TTTBCCSSBSEEEECGGGEEECCTTCCCCEEEEEGGG
T ss_pred             CCCCCEEEEcCcc-CCCCcccccccccccccccccc-------eeecccccceeeeehhhcceecCCCCCHHHHHHHHhH
Confidence            9999999987765 8999999999999999986543       5567899999999999999999999999989989999


Q ss_pred             hhhhhhHhhhcCCCCCCCEEEE
Q 018067          168 GITVYSPLRFYGLDKPGMHVGV  189 (361)
Q Consensus       168 ~~ta~~~l~~~~~~~~g~~vlV  189 (361)
                      +.|+|+++++ +.+ .|++|||
T Consensus       151 ~~ta~~al~~-~~~-~G~~VlI  170 (171)
T d1h2ba1         151 INDVLERLEK-GEV-LGRAVLI  170 (171)
T ss_dssp             HHHHHHHHHT-TCC-SSEEEEE
T ss_pred             HHHHHHHHHh-cCC-CCCEEEe
Confidence            9999999975 556 8999997

>d1f8fa1 b.35.1.2 (A:4-162,A:337-371) Benzyl alcohol dehydrogenase {Acinetobacter calcoaceticus [TaxId: 471]}

class: All beta proteins
fold: GroES-like
superfamily: GroES-like
family: Alcohol dehydrogenase-like, N-terminal domain
domain: Benzyl alcohol dehydrogenase
species: Acinetobacter calcoaceticus [TaxId: 471]

Probab=100.00  E-value=1.7e-33  Score=236.82  Aligned_cols=171  Identities=20%  Similarity=0.391  Sum_probs=140.8

Q ss_pred             eeeecCCCCCccceeeccCCCCCCeEEEEEeeeccCcchHHhHhcCCCCCCCCCcccccccEEEEEeCCCCCCCCCCCEE
Q 018067           15 GWAAKDTSGVLSPFHFSRRATGEKDVTFKVTHCGICHSDLHMIKNEWGNTIYPIVPGHEIVGVVTEVGSKVSKFKVGDKV   94 (361)
Q Consensus        15 ~~~~~~~~~~l~~~~~~~p~~~~~evlV~v~~~~i~~~D~~~~~g~~~~~~~p~~lG~e~~G~Vv~vG~~v~~~~~GdrV   94 (361)
                      +......+++|++++++.|+|+++|||||+.++|||++|++++.|.++ ..+|+++|||++|+|+++|+++++|++||||
T Consensus         6 Aav~~~~g~~l~l~~v~~P~p~~geVlVkv~a~gic~sD~~~~~G~~~-~~~P~i~GHE~~G~V~~vG~~v~~~~vGDrV   84 (194)
T d1f8fa1           6 AAVTPCKGADFELQALKIRQPQGDEVLVKVVATGMCHTDLIVRDQKYP-VPLPAVLGHEGSGIIEAIGPNVTELQVGDHV   84 (194)
T ss_dssp             EEEBCSTTCCCEEEEEEECCCCTTEEEEEEEEEECCHHHHHHHTTSSC-CCSSBCCCCEEEEEEEEECTTCCSCCTTCEE
T ss_pred             EEEEcCCCCCcEEEEeeCCCCCCCEEEEEEEEEEecCchHhhhhhccc-ccCCcccccceEEEeeecCccceeEccCcee
Confidence            333344556799999999999999999999999999999999999876 4689999999999999999999999999999


Q ss_pred             EeccccCCCCCCcccccCCCCCCcch-hcccccccCCC---------------CcCCCcceeEEeecCCceEECCCCCCc
Q 018067           95 GVGCMVGSCRSCDSCAIDLENYCPKV-IMTYANKYHDG---------------TITYGGYSDIMVADEHFVVRIPEGTPL  158 (361)
Q Consensus        95 ~~~~~~~~c~~c~~c~~~~~~~c~~~-~~~~~~~~~~~---------------~~~~g~~a~~v~v~~~~~~~ip~~~~~  158 (361)
                      + .++. +|++|.+|++|.++.|++. ...+.+....+               ....|+|+||..++..+++++|+++++
T Consensus        85 v-~~~~-~Cg~C~~C~~g~~~~C~~~~~~~~~g~~~dg~~~~~~~~~~~~~~~~~~~g~fae~~~v~~~~~~~ip~~i~~  162 (194)
T d1f8fa1          85 V-LSYG-YCGKCTQCNTGNPAYCSEFFGRNFSGADSEGNHALCTHDQGVVNDHFFAQSSFATYALSRENNTVKVTKDFPF  162 (194)
T ss_dssp             E-ECCC-CCSSSHHHHTTCGGGCTTHHHHSSSSSCSSSCCSBC------CBCCGGGTCCSBSEEEEEGGGEEEECTTCCG
T ss_pred             e-eecc-cccCChhhhCCCcccccccccceeccccccceeeeecCCceeeccccccccccceeEEEehHHEEECCCCCCc
Confidence            5 4555 7999999999999999985 22222221111               123489999999999999999999886


Q ss_pred             ccccccchhhhhhhhHhhhcCCCCCCCEEEEEcCChHHHHHHHHHHHcCCeEEEE
Q 018067          159 DATAPLLCAGITVYSPLRFYGLDKPGMHVGVVGLGGLGHVAVKFAKAMGVKVTVI  213 (361)
Q Consensus       159 ~~aa~l~~~~~ta~~~l~~~~~~~~g~~vlV~Gag~vG~~a~~la~~~g~~vi~~  213 (361)
                      +++                         +++.|+|++|++++|+++.+|++.++.
T Consensus       163 ~~~-------------------------~~i~g~g~~g~~aiq~a~~~g~~~iia  192 (194)
T d1f8fa1         163 DQL-------------------------VKFYAFDEINQAAIDSRKGITLKPIIK  192 (194)
T ss_dssp             GGG-------------------------EEEEEGGGHHHHHHHHHHTSCSEEEEE
T ss_pred             ccE-------------------------EEEeCcHHHHHHHHHHHHHcCCCEEEE
Confidence            543                         445688999999999999999965544

>d1e3ia1 b.35.1.2 (A:1-167,A:342-376) Alcohol dehydrogenase {Mouse (Mus musculus), class II [TaxId: 10090]}

class: All beta proteins
fold: GroES-like
superfamily: GroES-like
family: Alcohol dehydrogenase-like, N-terminal domain
domain: Alcohol dehydrogenase
species: Mouse (Mus musculus), class II [TaxId: 10090]

Probab=100.00  E-value=1.4e-33  Score=239.77  Aligned_cols=180  Identities=22%  Similarity=0.285  Sum_probs=148.3

Q ss_pred             CCcccceeeeeecCCCCCccceeeccCCCCCCeEEEEEeeeccCcchHHhHhcCCCCCCCCCcccccccEEEEEeCCCCC
Q 018067            7 QEHPKNAFGWAAKDTSGVLSPFHFSRRATGEKDVTFKVTHCGICHSDLHMIKNEWGNTIYPIVPGHEIVGVVTEVGSKVS   86 (361)
Q Consensus         7 ~~~~~~~~~~~~~~~~~~l~~~~~~~p~~~~~evlV~v~~~~i~~~D~~~~~g~~~~~~~p~~lG~e~~G~Vv~vG~~v~   86 (361)
                      ...+||+.++...+..+.|+++++|.|+|+++||||||+++|||++|++.++|.++ ..+|.++|||++|+|+++|++|+
T Consensus         3 ~~~~~~~KAaV~~~~g~pl~i~evp~P~p~~geVlVkv~a~gic~sD~~~~~G~~~-~~~P~v~GHE~~G~V~~vG~~V~   81 (202)
T d1e3ia1           3 QGKVIKCKAAIAWKTGSPLCIEEIEVSPPKACEVRIQVIATCVCPTDINATDPKKK-ALFPVVLGHECAGIVESVGPGVT   81 (202)
T ss_dssp             TTSCEEEEEEEBCSTTSCCEEEEEEECCCCTTEEEEEEEEEECCHHHHHTTCTTSC-CCSSBCCCCEEEEEEEEECTTCC
T ss_pred             CCCeEEEEEEEEccCCCCCEEEEEECCCCCCCEEEEEEEEEEEeccccceeeeecc-cccccccccccceEEeeecCCce
Confidence            34566666666644444599999999999999999999999999999999998776 46799999999999999999999


Q ss_pred             CCCCCCEEEeccccCCCCCCcccccCCCCCCcchhcccc------------------cccCCCCcCCCcceeEEeecCCc
Q 018067           87 KFKVGDKVGVGCMVGSCRSCDSCAIDLENYCPKVIMTYA------------------NKYHDGTITYGGYSDIMVADEHF  148 (361)
Q Consensus        87 ~~~~GdrV~~~~~~~~c~~c~~c~~~~~~~c~~~~~~~~------------------~~~~~~~~~~g~~a~~v~v~~~~  148 (361)
                      +|++||||++.+. ..|+.|.+|..|+++.|.+....-.                  +....+....|+|+||+.+++.+
T Consensus        82 ~~~~GdrV~~~~~-~~c~~c~~c~~g~~~~C~~~~~~~~~~~~~~~~~~~~~~~~~~g~~v~~~~~~G~faey~~v~~~~  160 (202)
T d1e3ia1          82 NFKPGDKVIPFFA-PQCKRCKLCLSPLTNLCGKLRNFKYPTIDQELMEDRTSRFTCKGRSIYHFMGVSSFSQYTVVSEAN  160 (202)
T ss_dssp             SCCTTCEEEECSS-CCCSSSHHHHCTTCCCCTTCCCSSCGGGSSCSCTTSCCSEEETTEEEBCCTTTCCSBSEEEEEGGG
T ss_pred             eccCCCEEEEEee-ccccccccccCCcccccccccccccCccceecccccccccccCceeeecccccCCceEEEEEehhh
Confidence            9999999987665 4999999999999999987532110                  00011223359999999999999


Q ss_pred             eEECCCCCCcccccccchhhhhhhhHhhhcCCCCCCCEEEEEc
Q 018067          149 VVRIPEGTPLDATAPLLCAGITVYSPLRFYGLDKPGMHVGVVG  191 (361)
Q Consensus       149 ~~~ip~~~~~~~aa~l~~~~~ta~~~l~~~~~~~~g~~vlV~G  191 (361)
                      ++++|++++++.++++.+++.+++.++..   +|+|++|.|+.
T Consensus       161 l~~lP~~~~~~~~~~~~~~~~~~~~a~~~---~k~G~~V~vi~  200 (202)
T d1e3ia1         161 LARVDDEFDLDLLVTHALPFESINDAIDL---MKEGKSIRTIL  200 (202)
T ss_dssp             EEECCTTSCGGGGEEEEEEGGGHHHHHHH---HHTTCCSEEEE
T ss_pred             EEECCCCCCHHHHHHHHHHHHHHHHHHHh---CCCCCEEEEEE
Confidence            99999999999999999988888888754   47899998863

>d1vj0a1 b.35.1.2 (A:2-155,A:338-367) Hypothetical protein TM0436 {Thermotoga maritima [TaxId: 2336]}

class: All beta proteins
fold: GroES-like
superfamily: GroES-like
family: Alcohol dehydrogenase-like, N-terminal domain
domain: Hypothetical protein TM0436
species: Thermotoga maritima [TaxId: 2336]

Probab=100.00  E-value=1.1e-33  Score=235.25  Aligned_cols=172  Identities=22%  Similarity=0.299  Sum_probs=139.6

Q ss_pred             cccceeeeeecCCCCCccceeeccCCCCCCeEEEEEeeeccCcchHHhHhcCCCCCCCCCcccccccEEEEEeCCCCC--
Q 018067            9 HPKNAFGWAAKDTSGVLSPFHFSRRATGEKDVTFKVTHCGICHSDLHMIKNEWGNTIYPIVPGHEIVGVVTEVGSKVS--   86 (361)
Q Consensus         9 ~~~~~~~~~~~~~~~~l~~~~~~~p~~~~~evlV~v~~~~i~~~D~~~~~g~~~~~~~p~~lG~e~~G~Vv~vG~~v~--   86 (361)
                      ..|+++.+...+  +.|++++++.|+|+++||||||.++|||++|+++++|.++...+|+++|||++|+|+++|++|+  
T Consensus         3 ~k~kA~v~~~~~--~pl~i~ev~~P~~~~~evlVkv~a~gIC~sD~~~~~G~~~~~~~P~vlGHE~~G~V~~vG~~v~~~   80 (184)
T d1vj0a1           3 LKAHAMVLEKFN--QPLVYKEFEISDIPRGSILVEILSAGVCGSDVHMFRGEDPRVPLPIILGHEGAGRVVEVNGEKRDL   80 (184)
T ss_dssp             EEEEEEEBCSTT--SCCEEEEEEECCCCTTCEEEEEEEEEECHHHHHHHTTCCTTCCSSBCCCCEEEEEEEEESSCCBCT
T ss_pred             ceEEEEEEecCC--CCcEEEEeeCCCCCCCEEEEEEEEECCCCCchhheeccCCccccccccceeeeeeeeEEecccccc
Confidence            355555554433  3489999999999999999999999999999999999888778999999999999999999986  


Q ss_pred             ---CCCCCCEEEeccccCCCCCCcccccCCC-CCCcchh-cccccccCCCCcCCCcceeEEeec-CCceEECCCCCCccc
Q 018067           87 ---KFKVGDKVGVGCMVGSCRSCDSCAIDLE-NYCPKVI-MTYANKYHDGTITYGGYSDIMVAD-EHFVVRIPEGTPLDA  160 (361)
Q Consensus        87 ---~~~~GdrV~~~~~~~~c~~c~~c~~~~~-~~c~~~~-~~~~~~~~~~~~~~g~~a~~v~v~-~~~~~~ip~~~~~~~  160 (361)
                         ++++||||++.+.. +|++|.+|..|++ +.|+++. +.+..++......+|+|+||+.++ ..+++++|+++++++
T Consensus        81 ~~~~~~~Gd~V~~~~~~-~Cg~C~~C~~g~~~~~c~~~~~~G~~~~~~~~~~~~Gg~ae~~~v~~~~~v~~ip~~l~~~~  159 (184)
T d1vj0a1          81 NGELLKPGDLIVWNRGI-TCGECYWCKVSKEPYLCPNRKVYGINRGCSEYPHLRGCYSSHIVLDPETDVLKVSEKITHRL  159 (184)
T ss_dssp             TSCBCCTTCEEEECSEE-CCSSSHHHHTSCCGGGCTTCEETTTTCCSSSTTCCCSSSBSEEEECTTCCEEEECTTCCEEE
T ss_pred             ccccccceeeeEecccc-ccccChhHhCccccccCCCceeeccCCCCCCCCCcceeCcCcEEechhHcEEECCCCCCHHH
Confidence               46899999887765 9999999999985 5688753 223333333345689999999995 579999999999764


Q ss_pred             ccccchhhhhhhhHhhhcCCCCCCCEEEEE
Q 018067          161 TAPLLCAGITVYSPLRFYGLDKPGMHVGVV  190 (361)
Q Consensus       161 aa~l~~~~~ta~~~l~~~~~~~~g~~vlV~  190 (361)
                            ++.+|++++.... +++|++|||+
T Consensus       160 ------pl~~A~~a~~~~~-~~~G~~VlI~  182 (184)
T d1vj0a1         160 ------PLKEANKALELME-SREALKVILY  182 (184)
T ss_dssp             ------EGGGHHHHHHHHH-HTSCSCEEEE
T ss_pred             ------HHHHHHHHHHHhC-CCcCCEEEEe
Confidence                  2456777786644 7999999997

>d1jqba1 b.35.1.2 (A:1001-1139,A:1314-1351) Bacterial secondary alcohol dehydrogenase {Clostridium beijerinckii [TaxId: 1520]}

class: All beta proteins
fold: GroES-like
superfamily: GroES-like
family: Alcohol dehydrogenase-like, N-terminal domain
domain: Bacterial secondary alcohol dehydrogenase
species: Clostridium beijerinckii [TaxId: 1520]

Probab=100.00  E-value=1.6e-35  Score=245.22  Aligned_cols=171  Identities=18%  Similarity=0.230  Sum_probs=139.1

Q ss_pred             cceeeeeecCCCCCccceeeccCCCCCCeEEEEEeeeccCcchHHhHhcCCCCCCCCCcccccccEEEEEeCCCCCCCCC
Q 018067           11 KNAFGWAAKDTSGVLSPFHFSRRATGEKDVTFKVTHCGICHSDLHMIKNEWGNTIYPIVPGHEIVGVVTEVGSKVSKFKV   90 (361)
Q Consensus        11 ~~~~~~~~~~~~~~l~~~~~~~p~~~~~evlV~v~~~~i~~~D~~~~~g~~~~~~~p~~lG~e~~G~Vv~vG~~v~~~~~   90 (361)
                      ||++.+..   |++++++++|.|.|+++|||||++++|||++|++.+.+......+|+++|||++|+|+++|+++++|++
T Consensus         1 MKa~v~~~---~~~l~i~e~p~P~~~~~eVlIkv~a~gic~sD~~~~~~~~~~~~~P~i~GhE~~G~V~~vG~~v~~~~v   77 (177)
T d1jqba1           1 MKGFAMLG---INKLGWIEKERPVAGSYDAIVRPLAVSPCTSDIHTVFEGALGDRKNMILGHEAVGEVVEVGSEVKDFKP   77 (177)
T ss_dssp             CEEEEEEE---TTEEEEEECCCCCCCTTCEEEEEEEECCCHHHHHHHHHCTTCCCSSEECCCCEEEEEEEECTTCCSCCT
T ss_pred             CeEEEEEe---CCCeEEEEeeCCCCCCCEEEEEEEEEecCCCcccccccCCCCCCCCccCcceeeEEeeecccccceecC
Confidence            67777654   566999999999999999999999999999999988765555688999999999999999999999999


Q ss_pred             CCEEEeccccCCCCCCcccccCCCCCCcchhcccccccCCCCcCCCcceeEEeecC--CceEECCCCCCcccccccchhh
Q 018067           91 GDKVGVGCMVGSCRSCDSCAIDLENYCPKVIMTYANKYHDGTITYGGYSDIMVADE--HFVVRIPEGTPLDATAPLLCAG  168 (361)
Q Consensus        91 GdrV~~~~~~~~c~~c~~c~~~~~~~c~~~~~~~~~~~~~~~~~~g~~a~~v~v~~--~~~~~ip~~~~~~~aa~l~~~~  168 (361)
                      ||||++.+.. +|++|.+|..+.+++|.+....+    ..+...+|+|+||+++|.  .+++++|+++++++++..... 
T Consensus        78 GdrV~v~~~~-~cg~c~~C~~g~~~~c~~~~~~~----~~g~~~~G~~aEy~~vp~a~~~l~~iP~~~~~~~~~~~~~~-  151 (177)
T d1jqba1          78 GDRVIVPCTT-PDWRSLEVQAGFQQHSNGMLAGW----KFSNFKDGVFGEYFHVNDADMNLAILPKDVDLSKLVTHVYH-  151 (177)
T ss_dssp             TCEEEECSCC-CCSSSHHHHTTCGGGTTSTTTTC----CBTTTBCCSSBSSEEESSHHHHCEECCTTSCGGGGEEEEEE-
T ss_pred             CCcEEEeeee-ccccccchhhhhhcccccccccc----cccCCCChhcCeeEEEEhhhCeEEECCCCcchHHHHHHHHH-
Confidence            9999876655 99999999999999999874432    224457899999999985  479999999998887643322 


Q ss_pred             hhhhhHhhhcCCCCCCCEEEEEcCChHHHHHH
Q 018067          169 ITVYSPLRFYGLDKPGMHVGVVGLGGLGHVAV  200 (361)
Q Consensus       169 ~ta~~~l~~~~~~~~g~~vlV~Gag~vG~~a~  200 (361)
                        ++..+        ++.++++|+|++|+.++
T Consensus       152 --~~~~~--------~~~vlv~g~gp~gl~aa  173 (177)
T d1jqba1         152 --GFDHI--------EEALLLMKDKPKDLIKA  173 (177)
T ss_dssp             --SGGGH--------HHHHHHHHHCCTTCSEE
T ss_pred             --HHHHh--------cCceEEECCCHHHhhee
Confidence              22222        33477788888887654

>d1pl8a1 b.35.1.2 (A:1-145,A:317-356) Ketose reductase (sorbitol dehydrogenase) {Human (Homo sapiens) [TaxId: 9606]}

class: All beta proteins
fold: GroES-like
superfamily: GroES-like
family: Alcohol dehydrogenase-like, N-terminal domain
domain: Ketose reductase (sorbitol dehydrogenase)
species: Human (Homo sapiens) [TaxId: 9606]

Probab=100.00  E-value=1.9e-33  Score=235.40  Aligned_cols=171  Identities=19%  Similarity=0.281  Sum_probs=143.0

Q ss_pred             ccceeeeeecCCCCCccceeeccCCCCCCeEEEEEeeeccCcchHHhHhcCCC---CCCCCCcccccccEEEEEeCCCCC
Q 018067           10 PKNAFGWAAKDTSGVLSPFHFSRRATGEKDVTFKVTHCGICHSDLHMIKNEWG---NTIYPIVPGHEIVGVVTEVGSKVS   86 (361)
Q Consensus        10 ~~~~~~~~~~~~~~~l~~~~~~~p~~~~~evlV~v~~~~i~~~D~~~~~g~~~---~~~~p~~lG~e~~G~Vv~vG~~v~   86 (361)
                      .|+++++   .+|++|++++++.|+|+++||||||+++|||++|++.+++...   ...+|.++|||++|+|+++|++++
T Consensus         7 ~~~a~V~---~gp~~l~l~evp~P~p~~~eVlVkv~a~gic~sD~~~~~~~~~~~~~~~~p~i~GhE~~G~V~~vG~~v~   83 (185)
T d1pl8a1           7 NNLSLVV---HGPGDLRLENYPIPEPGPNEVLLRMHSVGICGSDVHYWEYGRIGNFIVKKPMVLGHEASGTVEKVGSSVK   83 (185)
T ss_dssp             CCEEEEE---EETTEEEEEECCCCCCCTTEEEEEEEEEEECHHHHHHHHHSEETTEECSSCEECCCEEEEEEEEECTTCC
T ss_pred             CCEEEEE---eCCCeEEEEEeECCCCCCCEEEEEEEEEEeeCchhhhhccccccccCCCCCeeeeeeeeeeEEEecccee
Confidence            3445554   3677899999999999999999999999999999999876432   246789999999999999999999


Q ss_pred             CCCCCCEEEeccccCCCCCCcccccCCCCCCcchhcccccccCCCCcCCCcceeEEeecCCceEECCCCCCcccccccch
Q 018067           87 KFKVGDKVGVGCMVGSCRSCDSCAIDLENYCPKVIMTYANKYHDGTITYGGYSDIMVADEHFVVRIPEGTPLDATAPLLC  166 (361)
Q Consensus        87 ~~~~GdrV~~~~~~~~c~~c~~c~~~~~~~c~~~~~~~~~~~~~~~~~~g~~a~~v~v~~~~~~~ip~~~~~~~aa~l~~  166 (361)
                      +|++||||++.+.. +|++|.+|..|+++.|.+..+..      ....+|+|+||+.++.++++++|+++++++|+.++ 
T Consensus        84 ~~~~GdrV~~~~~~-~cg~c~~c~~G~~~~c~~~~~~g------~~~~~G~~aey~~~~~~~~~~lP~~~~~~~aa~~p-  155 (185)
T d1pl8a1          84 HLKPGDRVAIEPGA-PRENDEFCKMGRYNLSPSIFFCA------TPPDDGNLCRFYKHNAAFCYKLPDNVKPLVTHRFP-  155 (185)
T ss_dssp             SCCTTCEEEECSEE-CSSCCHHHHTTCGGGCTTCEETT------BTTBCCSCBSEEEEEGGGEEECCTTCGGGEEEEEE-
T ss_pred             eecccccceeccee-ccccchhhccchhchhccceeee------cccccccceEEEEEchHHEEECCCCCCHHHHHHHH-
Confidence            99999999887766 89999999999999999864431      23457899999999999999999999999987654 


Q ss_pred             hhhhhhhHhhhcCCCCCCCEEEEEcCCh
Q 018067          167 AGITVYSPLRFYGLDKPGMHVGVVGLGG  194 (361)
Q Consensus       167 ~~~ta~~~l~~~~~~~~g~~vlV~Gag~  194 (361)
                       +.+|+++++... +++|++||| |+|+
T Consensus       156 -l~~a~~a~~~~~-~~~G~~VlI-g~GP  180 (185)
T d1pl8a1         156 -LEKALEAFETFK-KGLGLKIML-KCDP  180 (185)
T ss_dssp             -GGGHHHHHHHHH-TTCCSEEEE-ECCT
T ss_pred             -HHHHHHHHHHhC-CCCCCEEEE-EeCC
Confidence             445677776554 689999988 6554

>d1kola1 b.35.1.2 (A:2-160,A:356-397) Formaldehyde dehydrogenase {Pseudomonas putida [TaxId: 303]}

class: All beta proteins
fold: GroES-like
superfamily: GroES-like
family: Alcohol dehydrogenase-like, N-terminal domain
domain: Formaldehyde dehydrogenase
species: Pseudomonas putida [TaxId: 303]

Probab=100.00  E-value=6.2e-36  Score=252.85  Aligned_cols=188  Identities=23%  Similarity=0.270  Sum_probs=153.5

Q ss_pred             cceeeeeecCCCCCccceeeccCCC-------CCCeEEEEEeeeccCcchHHhHhcCCCCCCCCCcccccccEEEEEeCC
Q 018067           11 KNAFGWAAKDTSGVLSPFHFSRRAT-------GEKDVTFKVTHCGICHSDLHMIKNEWGNTIYPIVPGHEIVGVVTEVGS   83 (361)
Q Consensus        11 ~~~~~~~~~~~~~~l~~~~~~~p~~-------~~~evlV~v~~~~i~~~D~~~~~g~~~~~~~p~~lG~e~~G~Vv~vG~   83 (361)
                      +|++++.   +|+++++++++.|++       .++||||||.+++||++|++.++|..+ ..+|+++|||++|+|+++|+
T Consensus         2 ~kA~v~~---~~~~le~~e~~~P~~~~p~~~p~~~eVlVkv~a~giC~sDl~~~~G~~~-~~~P~v~GHE~~G~Vv~vG~   77 (201)
T d1kola1           2 NRGVVYL---GSGKVEVQKIDYPKMQDPRGKKIEHGVILKVVSTNICGSDQHMVRGRTT-AQVGLVLGHEITGEVIEKGR   77 (201)
T ss_dssp             EEEEEEE---ETTEEEEEEECCCCSBCTTSCBCSSCEEEEEEEEECCHHHHHHHTTCSC-CCTTCBCCCCEEEEEEEECT
T ss_pred             cEEEEEe---CCCceEEEEecCCcccCCCCCCCCCEEEEEEEEEEEcchhhhhhcCCcc-cccceeccceeeeeeecccc
Confidence            4556654   456799999999865       469999999999999999999998776 47899999999999999999


Q ss_pred             CCCCCCCCCEEEeccccCCCCCCcccccCCCCCCcchhccccc---ccCCCCcCCCcceeEEeecC--CceEECCCCCCc
Q 018067           84 KVSKFKVGDKVGVGCMVGSCRSCDSCAIDLENYCPKVIMTYAN---KYHDGTITYGGYSDIMVADE--HFVVRIPEGTPL  158 (361)
Q Consensus        84 ~v~~~~~GdrV~~~~~~~~c~~c~~c~~~~~~~c~~~~~~~~~---~~~~~~~~~g~~a~~v~v~~--~~~~~ip~~~~~  158 (361)
                      +|++|++||||++.+.. +|++|.+|++++++.|........+   ++......+|+|+||+++|.  .++++||++.+.
T Consensus        78 ~V~~~~vGdrV~v~~~~-~Cg~C~~C~~g~~~~~~~~~~~~~~~~~g~~~~~~~~Gg~aeyv~vp~~~~~l~~iPd~~~~  156 (201)
T d1kola1          78 DVENLQIGDLVSVPFNV-ACGRCRSCKEMHTGVCLTVNPARAGGAYGYVDMGDWTGGQAEYVLVPYADFNLLKLPDRDKA  156 (201)
T ss_dssp             TCCSCCTTCEEECCSEE-CCSSSHHHHTTCGGGCSSSCSSSSCEEBTCTTSCCBCCCSBSEEEESSHHHHCEECSCHHHH
T ss_pred             ccccccccceeEEeeee-eccCChhhhCCCcccccccccccccccccccCCCccccccccEEEeehHHCeEEECCCCCCh
Confidence            99999999999887755 9999999999999999875322211   12233456899999999985  379999998877


Q ss_pred             ccccccchhhhhhhhHhhhcCCCCCCCEEEEEcCChHHHHHHHHHHHcCC
Q 018067          159 DATAPLLCAGITVYSPLRFYGLDKPGMHVGVVGLGGLGHVAVKFAKAMGV  208 (361)
Q Consensus       159 ~~aa~l~~~~~ta~~~l~~~~~~~~g~~vlV~Gag~vG~~a~~la~~~g~  208 (361)
                      .+++.+.+.+.++++++.+.. .+.++    +|+|++|++++|+||++|+
T Consensus       157 ~~~~~~~~~~~~~~~a~~~~~-~~~g~----~g~G~vG~~~i~~ak~~GA  201 (201)
T d1kola1         157 MEKINIAEVVGVQVISLDDAP-RGYGE----FDAGVPKKFVIDPHKTFSA  201 (201)
T ss_dssp             HHTCCHHHHHTEEEECGGGHH-HHHHH----HHHTCSCEEEECTTCSSCC
T ss_pred             HHHHHHHHHHHHHHHHHHhCC-CCCeE----EeeCHHHHHHHHHHHHcCC
Confidence            788888888888888876543 34443    5899999999999999986

>d1rjwa1 b.35.1.2 (A:1-137,A:306-339) Alcohol dehydrogenase {Bacillus stearothermophilus [TaxId: 1422]}

class: All beta proteins
fold: GroES-like
superfamily: GroES-like
family: Alcohol dehydrogenase-like, N-terminal domain
domain: Alcohol dehydrogenase
species: Bacillus stearothermophilus [TaxId: 1422]

Probab=99.98  E-value=1.2e-32  Score=227.94  Aligned_cols=169  Identities=29%  Similarity=0.487  Sum_probs=143.8

Q ss_pred             cceeeeeecCCCCCccceeeccCCCCCCeEEEEEeeeccCcchHHhHhcC-CCCCCCCCcccccccEEEEEeCCCCCCCC
Q 018067           11 KNAFGWAAKDTSGVLSPFHFSRRATGEKDVTFKVTHCGICHSDLHMIKNE-WGNTIYPIVPGHEIVGVVTEVGSKVSKFK   89 (361)
Q Consensus        11 ~~~~~~~~~~~~~~l~~~~~~~p~~~~~evlV~v~~~~i~~~D~~~~~g~-~~~~~~p~~lG~e~~G~Vv~vG~~v~~~~   89 (361)
                      ||++.+..++.  .|++++++.|+|+++||||||+++|||++|++.+++. .....+|.++|||++|+|+++|+.+++++
T Consensus         1 MkA~v~~~~g~--pl~i~~v~~P~~~~~eVlVkv~a~gic~sD~~~~~~~~~~~~~~p~v~GhE~~G~Vv~vG~~v~~~~   78 (171)
T d1rjwa1           1 MKAAVVEQFKE--PLKIKEVEKPTISYGEVLVRIKACGVCHTDLHAAHGDWPVKPKLPLIPGHEGVGIVEEVGPGVTHLK   78 (171)
T ss_dssp             CEEEEBSSTTS--CCEEEECCCCCCCTTEEEEEEEEEEECHHHHHHHHTCSSSCCCSSBCCCSCEEEEEEEECTTCCSCC
T ss_pred             CeEEEEecCCC--CcEEEEeECCCCCCCeEEEEEEEeeccccceeeeecccccccccccccCCEEEEEEEEecccccCce
Confidence            77777766543  3899999999999999999999999999999988764 34458899999999999999999999999


Q ss_pred             CCCEEEeccccCCCCCCcccccCCCCCCcchhcccccccCCCCcCCCcceeEEeecCCceEECCCCCCcccccccchhhh
Q 018067           90 VGDKVGVGCMVGSCRSCDSCAIDLENYCPKVIMTYANKYHDGTITYGGYSDIMVADEHFVVRIPEGTPLDATAPLLCAGI  169 (361)
Q Consensus        90 ~GdrV~~~~~~~~c~~c~~c~~~~~~~c~~~~~~~~~~~~~~~~~~g~~a~~v~v~~~~~~~ip~~~~~~~aa~l~~~~~  169 (361)
                      +||||++.+....|+.|..|..+..+.|.+....       |...+|+|+||+.+++++++++|++++++.|+ +. ...
T Consensus        79 vGdrV~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-------g~~~~G~~aey~~v~~~~~~~iP~~~~~e~A~-l~-~~~  149 (171)
T d1rjwa1          79 VGDRVGIPWLYSACGHCDYCLSGQETLCEHQKNA-------GYSVDGGYAEYCRAAADYVVKIPDNTIIEVQP-LE-KIN  149 (171)
T ss_dssp             TTCEEEECSEEECCSCSHHHHTTCGGGCTTCEEB-------TTTBCCSSBSEEEEEGGGCEECCTTCCEEEEE-GG-GHH
T ss_pred             eeeEEeeccccccccccccccCCCcccccccccc-------ceeccCccccceEecHHHEEECCCCCCHHHHH-HH-HHH
Confidence            9999999888889999999999999999986543       45678999999999999999999999987654 43 345


Q ss_pred             hhhhHhhhcCCCCCCCEEEEEcC
Q 018067          170 TVYSPLRFYGLDKPGMHVGVVGL  192 (361)
Q Consensus       170 ta~~~l~~~~~~~~g~~vlV~Ga  192 (361)
                      ++++.+.+ +.+ +|++|||+|.
T Consensus       150 ~~~~~~~~-~~~-~G~tVlViG~  170 (171)
T d1rjwa1         150 EVFDRMLK-GQI-NGRVVLTLED  170 (171)
T ss_dssp             HHHHHHHT-TCC-SSEEEEECCC
T ss_pred             HHHHHHHh-cCC-CCCEEEEeCC
Confidence            66766654 444 5999999984

>d1uufa1 b.35.1.2 (A:3-144,A:313-349) Hypothetical protein YahK {Escherichia coli [TaxId: 562]}

class: All beta proteins
fold: GroES-like
superfamily: GroES-like
family: Alcohol dehydrogenase-like, N-terminal domain
domain: Hypothetical protein YahK
species: Escherichia coli [TaxId: 562]

Probab=99.98  E-value=1.8e-32  Score=227.33  Aligned_cols=162  Identities=40%  Similarity=0.750  Sum_probs=134.7

Q ss_pred             cceeeeeecCCCCCccceeeccCCCCCCeEEEEEeeeccCcchHHhHhcCCCCCCCCCcccccccEEEEEeCCCCCCCCC
Q 018067           11 KNAFGWAAKDTSGVLSPFHFSRRATGEKDVTFKVTHCGICHSDLHMIKNEWGNTIYPIVPGHEIVGVVTEVGSKVSKFKV   90 (361)
Q Consensus        11 ~~~~~~~~~~~~~~l~~~~~~~p~~~~~evlV~v~~~~i~~~D~~~~~g~~~~~~~p~~lG~e~~G~Vv~vG~~v~~~~~   90 (361)
                      |+++..  +.....|++++++.|+|+++||||||+++|||++|++.+.|.++...+|+++|||++|+|+++|++|++|++
T Consensus         1 m~a~~~--~~~~~pl~i~ev~~P~pg~geVlVkv~a~gic~sDl~~~~g~~~~~~~P~i~GhE~~G~V~~vG~~V~~~~v   78 (179)
T d1uufa1           1 IKAVGA--YSAKQPLEPMDITRREPGPNDVKIEIAYCGVCHSDLHQVRSEWAGTVYPCVPGHEIVGRVVAVGDQVEKYAP   78 (179)
T ss_dssp             CEEEEB--SSTTSCCEEEECCCCCCCTTEEEEEEEEEECCHHHHHHHHCTTSCCCSSBCCCCCEEEEEEEECTTCCSCCT
T ss_pred             CeEEEE--ccCCCCCEEEEecCCCCCCCEEEEEEEEECCCCCcceeeeeeeccccccccccccccccchhhccccccCCC
Confidence            455554  334456999999999999999999999999999999999998887899999999999999999999999999


Q ss_pred             CCEEEeccccCCCCCCcccccCCCCCCcchhccccccc-CCCCcCCCcceeEEeecCCceEECCCCCCcccccccchhhh
Q 018067           91 GDKVGVGCMVGSCRSCDSCAIDLENYCPKVIMTYANKY-HDGTITYGGYSDIMVADEHFVVRIPEGTPLDATAPLLCAGI  169 (361)
Q Consensus        91 GdrV~~~~~~~~c~~c~~c~~~~~~~c~~~~~~~~~~~-~~~~~~~g~~a~~v~v~~~~~~~ip~~~~~~~aa~l~~~~~  169 (361)
                      ||||.+.++.++|++|.+|.+|++++|.++.+.+.+.. ..+....|+|+||+.+++++++++|+......+   ..++.
T Consensus        79 GdrV~v~~~~~~cg~C~~C~~g~~~~C~~~~~~~~~~~~~~~~~~~GgfaEy~~v~~~~~~~ip~~~~~~~~---a~~l~  155 (179)
T d1uufa1          79 GDLVGVGCIVDSCKHCEECEDGLENYCDHMTGTYNSPTPDEPGHTLGGYSQQIVVHERYVLRIRVADIEMIR---ADQIN  155 (179)
T ss_dssp             TCEEEECSEEECCSSSHHHHTTCGGGCTTCEETTTSBCSSTTSBCCCSSBSEEEEEGGGCEECCCCCEEEEC---GGGHH
T ss_pred             CCEEEEcccccccCccccccCcccccCCCccccccccCCCCCcccccccceEEEechHHEEECCCCCcChhH---hchhH
Confidence            99999999999999999999999999999765544332 223455799999999999999999966533322   23456


Q ss_pred             hhhhHhhh
Q 018067          170 TVYSPLRF  177 (361)
Q Consensus       170 ta~~~l~~  177 (361)
                      ++++++.+
T Consensus       156 ~a~~a~~~  163 (179)
T d1uufa1         156 EAYERMLR  163 (179)
T ss_dssp             HHHHHHHT
T ss_pred             HHHHHHHH
Confidence            67777754

>d2jhfa1 b.35.1.2 (A:1-163,A:340-374) Alcohol dehydrogenase {Horse (Equus caballus) [TaxId: 9796]}

class: All beta proteins
fold: GroES-like
superfamily: GroES-like
family: Alcohol dehydrogenase-like, N-terminal domain
domain: Alcohol dehydrogenase
species: Horse (Equus caballus) [TaxId: 9796]

Probab=99.97  E-value=2.3e-31  Score=225.10  Aligned_cols=178  Identities=21%  Similarity=0.288  Sum_probs=142.6

Q ss_pred             cccceeeeeecCCCCCccceeeccCCCCCCeEEEEEeeeccCcchHHhHhcCCCCCCCCCcccccccEEEEEeCCCCCCC
Q 018067            9 HPKNAFGWAAKDTSGVLSPFHFSRRATGEKDVTFKVTHCGICHSDLHMIKNEWGNTIYPIVPGHEIVGVVTEVGSKVSKF   88 (361)
Q Consensus         9 ~~~~~~~~~~~~~~~~l~~~~~~~p~~~~~evlV~v~~~~i~~~D~~~~~g~~~~~~~p~~lG~e~~G~Vv~vG~~v~~~   88 (361)
                      ..||+.++...+.++.|++++++.|+|+++||||||+++|||++|++.++|.++. .+|.++|||++|+|+++|++++++
T Consensus         5 ~~~k~KAavl~~~~~~l~i~ev~~P~p~~~eVlVkV~a~giC~sDl~~~~G~~~~-~~P~i~GHE~~G~Vv~vG~~v~~~   83 (198)
T d2jhfa1           5 KVIKCKAAVLWEEKKPFSIEEVEVAPPKAHEVRIKMVATGICRSDDHVVSGTLVT-PLPVIAGHEAAGIVESIGEGVTTV   83 (198)
T ss_dssp             SCEEEEEEEBCSTTSCCEEEEEEECCCCTTEEEEEEEEEECCHHHHHHHHTSSCC-CSSBCCCCSEEEEEEEECTTCCSC
T ss_pred             CceEEEEEEEecCCCCCEEEEEECCCCCCCEEEEEEEEEecccccceeecCCccc-ccceecccceeEEEEecCccccCc
Confidence            3455555555555566999999999999999999999999999999999998764 689999999999999999999999


Q ss_pred             CCCCEEEeccccCCCCCCcccccCCCCCCcchhcccccccC--------------CCCcCCCcceeEEeecCCceEECCC
Q 018067           89 KVGDKVGVGCMVGSCRSCDSCAIDLENYCPKVIMTYANKYH--------------DGTITYGGYSDIMVADEHFVVRIPE  154 (361)
Q Consensus        89 ~~GdrV~~~~~~~~c~~c~~c~~~~~~~c~~~~~~~~~~~~--------------~~~~~~g~~a~~v~v~~~~~~~ip~  154 (361)
                      ++||||++.+.. +|+.|.+|..+..+.|.+....+..+..              ......|+|+||++++..+++++|+
T Consensus        84 ~vGdrV~v~~~~-~c~~c~~c~~g~~~~C~~~~~~~~~g~~~~~~~~~~~~g~~~~~~~~~G~fAEy~~v~~~~~~~~p~  162 (198)
T d2jhfa1          84 RPGDKVIPLFTP-QCGKCRVCKHPEGNFCLKNDLSMPRGTMQDGTSRFTCRGKPIHHFLGTSTFSQYTVVDEISVAKIDA  162 (198)
T ss_dssp             CTTCEEEECSSC-CCSCSHHHHSTTCCCCTTCSSSSCCCSCTTSCCSEEETTEEEBCSTTTCCSBSEEEEEGGGEEECCT
T ss_pred             CCCCEEEEeeee-cccccccccCCccceeccccccccCccccCccccccccCceeccCCCCCcccCeEEeCHHHeEECCC
Confidence            999999887765 9999999999999999987554322211              1112348999999999999999999


Q ss_pred             CCCcccccccchhhhhhhhHhhhcCCCCCCCEEEEEc
Q 018067          155 GTPLDATAPLLCAGITVYSPLRFYGLDKPGMHVGVVG  191 (361)
Q Consensus       155 ~~~~~~aa~l~~~~~ta~~~l~~~~~~~~g~~vlV~G  191 (361)
                      .++++.+++..+++.....+.   ..+++|++|+|+.
T Consensus       163 ~~~~e~l~~~~~~~~~v~~g~---~~l~~G~~VaVi~  196 (198)
T d2jhfa1         163 AFALDPLITHVLPFEKINEGF---DLLRSGESIRTIL  196 (198)
T ss_dssp             TSCCGGGEEEEEEGGGHHHHH---HHHHTTCCSEEEE
T ss_pred             CCCHHHHHHHHHHHHhhhhCC---ceeeCCCEEEEEE
Confidence            999887766555544433222   2257899998863

>d1jvba1 b.35.1.2 (A:1-143,A:314-347) Alcohol dehydrogenase {Archaeon Sulfolobus solfataricus [TaxId: 2287]}

class: All beta proteins
fold: GroES-like
superfamily: GroES-like
family: Alcohol dehydrogenase-like, N-terminal domain
domain: Alcohol dehydrogenase
species: Archaeon Sulfolobus solfataricus [TaxId: 2287]

Probab=99.97  E-value=1.3e-31  Score=222.92  Aligned_cols=167  Identities=25%  Similarity=0.367  Sum_probs=139.1

Q ss_pred             cceeeeeecCCCCCccceeeccCCCCCCeEEEEEeeeccCcchHHhHhcCCC--------CCCCCCcccccccEEEEEeC
Q 018067           11 KNAFGWAAKDTSGVLSPFHFSRRATGEKDVTFKVTHCGICHSDLHMIKNEWG--------NTIYPIVPGHEIVGVVTEVG   82 (361)
Q Consensus        11 ~~~~~~~~~~~~~~l~~~~~~~p~~~~~evlV~v~~~~i~~~D~~~~~g~~~--------~~~~p~~lG~e~~G~Vv~vG   82 (361)
                      ||++.+..+++|  |++++++.|+|+++|||||+.++|||++|++.++|.++        ...+|+++|||++|+|+++|
T Consensus         1 MKA~~~~~~G~p--l~i~dv~~P~p~~~eVlVkv~a~gic~~D~~~~~G~~~~~~~~~~~~~~~P~v~GhE~~G~V~~~g   78 (177)
T d1jvba1           1 MRAVRLVEIGKP--LSLQEIGVPKPKGPQVLIKVEAAGVCHSDVHMRQGRFGNLRIVEDLGVKLPVTLGHEIAGKIEEVG   78 (177)
T ss_dssp             CEEEEECSTTSC--CEEEECCCCCCCTTCEEEEEEEEEECTHHHHHTTTEETTEETTTTTCCCSCEECCCEEEEEEEEEC
T ss_pred             CeEEEEEeCCCC--CEEEEeeCCCCCCCEEEEEEEEEecccceeeeecCcccccccccccccCCCccccceEEEEEeeec
Confidence            788888776655  88999999999999999999999999999999998643        24789999999999999999


Q ss_pred             CCCCCCCCCCEEEeccccCCCCCCcccccCCCCCCcchhcccccccCCCCcCCCcceeEEeecCCc-eEECCCCCCcccc
Q 018067           83 SKVSKFKVGDKVGVGCMVGSCRSCDSCAIDLENYCPKVIMTYANKYHDGTITYGGYSDIMVADEHF-VVRIPEGTPLDAT  161 (361)
Q Consensus        83 ~~v~~~~~GdrV~~~~~~~~c~~c~~c~~~~~~~c~~~~~~~~~~~~~~~~~~g~~a~~v~v~~~~-~~~ip~~~~~~~a  161 (361)
                      +.+++|++||||++.+.. .|+.|.+|+++.++.|.+..+.       |...+|+|+||+.++... ++++|+..+.+.|
T Consensus        79 ~~v~~~~~GdrV~~~~~~-~c~~c~~~~~g~~~~c~~~~~~-------g~~~~G~~aey~~vp~~~~~~~~~~~~~~~~a  150 (177)
T d1jvba1          79 DEVVGYSKGDLVAVNPWQ-GEGNCYYCRIGEEHLCDSPRWL-------GINFDGAYAEYVIVPHYKYMYKLRRVKPMITK  150 (177)
T ss_dssp             TTCCSCCTTCEEEECCEE-CCSSSHHHHTTCGGGCSSCEEB-------TTTBCCSSBSEEEESCGGGEEECSSSCCCCEE
T ss_pred             cCccccccCceEeeeecc-ccccccccccccccccCCccee-------eeccccccccEEEEEhHHeEEECCCCChHHHH
Confidence            999999999999887655 8999999999999999986443       446789999999997654 6666665555445


Q ss_pred             cccchhhhhhhhHhhhcCCCCCCCEEEE
Q 018067          162 APLLCAGITVYSPLRFYGLDKPGMHVGV  189 (361)
Q Consensus       162 a~l~~~~~ta~~~l~~~~~~~~g~~vlV  189 (361)
                      +.+.+++.++++++.... . .|++|||
T Consensus       151 ~~~~~~~~~a~~~~~~~~-~-~G~~VlI  176 (177)
T d1jvba1         151 TMKLEEANEAIDNLENFK-A-IGRQVLI  176 (177)
T ss_dssp             EEEGGGHHHHHHHHHTTC-C-CSEEEEE
T ss_pred             HHHHHHHHHHHHHHHhhc-c-cCCceEC
Confidence            455567888999887654 3 5899987

>d1p0fa1 b.35.1.2 (A:1001-1163,A:1338-1372) Alcohol dehydrogenase {Frog (Rana perezi) [TaxId: 8403]}

class: All beta proteins
fold: GroES-like
superfamily: GroES-like
family: Alcohol dehydrogenase-like, N-terminal domain
domain: Alcohol dehydrogenase
species: Frog (Rana perezi) [TaxId: 8403]

Probab=99.97  E-value=4.5e-32  Score=228.91  Aligned_cols=178  Identities=22%  Similarity=0.264  Sum_probs=140.4

Q ss_pred             CCcccceeeeeecCCCCCccceeeccCCCCCCeEEEEEeeeccCcchHHhHhcCCCCCCCCCcccccccEEEEEeCCCCC
Q 018067            7 QEHPKNAFGWAAKDTSGVLSPFHFSRRATGEKDVTFKVTHCGICHSDLHMIKNEWGNTIYPIVPGHEIVGVVTEVGSKVS   86 (361)
Q Consensus         7 ~~~~~~~~~~~~~~~~~~l~~~~~~~p~~~~~evlV~v~~~~i~~~D~~~~~g~~~~~~~p~~lG~e~~G~Vv~vG~~v~   86 (361)
                      ..++||+..+..  ..+.|++++++.|+|+++||||||.++|||++|+++++|..+. .+|.++|||++|+|+++|+++.
T Consensus         5 ~~~~~KAav~~~--~g~~l~i~ev~~P~p~~~eVlVkv~a~gICgsDlh~~~G~~~~-~~P~i~GHE~~G~Vv~~G~~v~   81 (198)
T d1p0fa1           5 KDITCKAAVAWE--PHKPLSLETITVAPPKAHEVRIKILASGICGSDSSVLKEIIPS-KFPVILGHEAVGVVESIGAGVT   81 (198)
T ss_dssp             SCEEEEEEEBSS--TTSCCEEEEEEECCCCTTEEEEEEEEEECCHHHHHHHTTSSCC-CSSBCCCCCEEEEEEEECTTCC
T ss_pred             CceEEEEEEEcc--CCCCCEEEEEECCCCCCCEEEEEEEEEEEecccceeeeecccc-ccccccceeeeeeeeecCcccc
Confidence            345666666533  3345999999999999999999999999999999999998764 7899999999999999999999


Q ss_pred             CCCCCCEEEeccccCCCCCCcccccCCCCCCcchhccccccc-C-------------CCCcCCCcceeEEeecCCceEEC
Q 018067           87 KFKVGDKVGVGCMVGSCRSCDSCAIDLENYCPKVIMTYANKY-H-------------DGTITYGGYSDIMVADEHFVVRI  152 (361)
Q Consensus        87 ~~~~GdrV~~~~~~~~c~~c~~c~~~~~~~c~~~~~~~~~~~-~-------------~~~~~~g~~a~~v~v~~~~~~~i  152 (361)
                      +|++||||++.+.. +|++|.+|.++.+++|.+..+....+. .             ......|+|+||+.+++..++++
T Consensus        82 ~~~~GdrV~~~~~~-~Cg~c~~c~~g~~~~C~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~g~faey~~v~~~~~~ki  160 (198)
T d1p0fa1          82 CVKPGDKVIPLFVP-QCGSCRACKSSNSNFCEKNDMGAKTGLMADMTSRFTCRGKPIYNLMGTSTFTEYTVVADIAVAKI  160 (198)
T ss_dssp             SCCTTCEEEECSSC-CCSSSHHHHCTTCCCCTTCSTTTCCCSCTTSCCSEEETTEEEBCSTTTCCSBSEEEEETTSEEEE
T ss_pred             cCcCCCEEEEEeec-cccccccccccccccchhhhccccccccCCCceeEeeCCeeccccCCCccceeeEEecHHHEEEC
Confidence            99999999886654 999999999999999997643321111 1             01122589999999999999999


Q ss_pred             CCCCCcccccccchhhhhhhhHhhhcCCCCCCCEEEEEcCChHHHH
Q 018067          153 PEGTPLDATAPLLCAGITVYSPLRFYGLDKPGMHVGVVGLGGLGHV  198 (361)
Q Consensus       153 p~~~~~~~aa~l~~~~~ta~~~l~~~~~~~~g~~vlV~Gag~vG~~  198 (361)
                      |++++.+.++...+...+          ++++++|||.|+|++|++
T Consensus       161 p~~~~~~~~~~~~~~~~~----------v~~~~~vlv~G~G~iGl~  196 (198)
T d1p0fa1         161 DPKINVNFLVSTKLTLDQ----------INKAFELLSSGQGVRSIM  196 (198)
T ss_dssp             CTTSCGGGGEEEEECGGG----------HHHHHHHTTTSSCSEEEE
T ss_pred             CCCCCHHHHHHhhcchhh----------cCCCCEEEEECCCcceEE
Confidence            999998776554443222          234455888888887753

>d1yb5a1 b.35.1.2 (A:6-120,A:295-329) Quinone oxidoreductase {Human (Homo sapiens) [TaxId: 9606]}

class: All beta proteins
fold: GroES-like
superfamily: GroES-like
family: Alcohol dehydrogenase-like, N-terminal domain
domain: Quinone oxidoreductase
species: Human (Homo sapiens) [TaxId: 9606]

Probab=99.97  E-value=2.4e-30  Score=208.72  Aligned_cols=147  Identities=21%  Similarity=0.315  Sum_probs=134.0

Q ss_pred             ccceeeeeecCCCCCccce-eeccCCCCCCeEEEEEeeeccCcchHHhHhcCCCC-CCCCCcccccccEEEEEeCCCCCC
Q 018067           10 PKNAFGWAAKDTSGVLSPF-HFSRRATGEKDVTFKVTHCGICHSDLHMIKNEWGN-TIYPIVPGHEIVGVVTEVGSKVSK   87 (361)
Q Consensus        10 ~~~~~~~~~~~~~~~l~~~-~~~~p~~~~~evlV~v~~~~i~~~D~~~~~g~~~~-~~~p~~lG~e~~G~Vv~vG~~v~~   87 (361)
                      .||++.+..+++|+++++. +++.|+|+++||||||++++||++|++.++|..+. ..+|.++|||++|+|+++|+++++
T Consensus         2 ~MkAv~~~~~G~p~~l~~~~~~~~P~~~~~eVlVkv~a~~i~~~D~~~~~g~~~~~~~~p~i~G~e~~G~V~~vG~~v~~   81 (150)
T d1yb5a1           2 LMRAVRVFEFGGPEVLKLRSDIAVPIPKDHQVLIKVHACGVNPVETYIRSGTYSRKPLLPYTPGSDVAGVIEAVGDNASA   81 (150)
T ss_dssp             EEEEEEESSCSSGGGEEEEEEEECCCCCTTEEEEEEEEEECCHHHHHHHHTCSSCCCCSSBCCCSCEEEEEEEECTTCTT
T ss_pred             ceeEEEEEccCCcceEEEEeecCCCCCCCCeEEEEEEEecCcccchhhhcCCcCccccccccCccceeeeeEeecceeec
Confidence            5899999988899989875 68999999999999999999999999999987654 478899999999999999999999


Q ss_pred             CCCCCEEEeccccCCCCCCcccccCCCCCCcchhcccccccCCCCcCCCcceeEEeecCCceEECCCCCCcccccccchh
Q 018067           88 FKVGDKVGVGCMVGSCRSCDSCAIDLENYCPKVIMTYANKYHDGTITYGGYSDIMVADEHFVVRIPEGTPLDATAPLLCA  167 (361)
Q Consensus        88 ~~~GdrV~~~~~~~~c~~c~~c~~~~~~~c~~~~~~~~~~~~~~~~~~g~~a~~v~v~~~~~~~ip~~~~~~~aa~l~~~  167 (361)
                      |++||||++.+                                  ..+|+|+||+.+++++++++|+++++++||++++.
T Consensus        82 ~~vGdrV~~~~----------------------------------~~~G~~ae~~~v~~~~~~~iP~~ls~~~Aa~~~~~  127 (150)
T d1yb5a1          82 FKKGDRVFTSS----------------------------------TISGGYAEYALAADHTVYKLPEKLKPVIGSQYPLE  127 (150)
T ss_dssp             CCTTCEEEESC----------------------------------CSSCSSBSEEEEEGGGEEECCTTCCCCEEEEEEGG
T ss_pred             cccCccccccc----------------------------------cccccccccccccccccccccCCCCHHHHHHhhhh
Confidence            99999997532                                  45799999999999999999999999999999999


Q ss_pred             hhhhhhHhhhcCCCCCCCEEEEE
Q 018067          168 GITVYSPLRFYGLDKPGMHVGVV  190 (361)
Q Consensus       168 ~~ta~~~l~~~~~~~~g~~vlV~  190 (361)
                      ..|+|+.+...+..+.|+++||+
T Consensus       128 ~~ta~~~~~~~g~~~~G~~vliL  150 (150)
T d1yb5a1         128 KVAEAHENIIHGSGATGKMILLL  150 (150)
T ss_dssp             GHHHHHHHHHHSSCCSSEEEEEC
T ss_pred             hhhehhhheEEcCcccCCEEEEC
Confidence            99999998888888999999884

>d1qora1 b.35.1.2 (A:2-112,A:292-327) Quinone oxidoreductase {Escherichia coli [TaxId: 562]}

class: All beta proteins
fold: GroES-like
superfamily: GroES-like
family: Alcohol dehydrogenase-like, N-terminal domain
domain: Quinone oxidoreductase
species: Escherichia coli [TaxId: 562]

Probab=99.96  E-value=5.7e-29  Score=200.16  Aligned_cols=143  Identities=18%  Similarity=0.238  Sum_probs=125.7

Q ss_pred             ceeeeeecCCCCCccceeeccCCCCCCeEEEEEeeeccCcchHHhHhcCCCCCCCCCcccccccEEEEEeCCCCCCCCCC
Q 018067           12 NAFGWAAKDTSGVLSPFHFSRRATGEKDVTFKVTHCGICHSDLHMIKNEWGNTIYPIVPGHEIVGVVTEVGSKVSKFKVG   91 (361)
Q Consensus        12 ~~~~~~~~~~~~~l~~~~~~~p~~~~~evlV~v~~~~i~~~D~~~~~g~~~~~~~p~~lG~e~~G~Vv~vG~~v~~~~~G   91 (361)
                      +.+.+..+++|+.|++++++.|+|+++||||||++++||++|++.++|.++...+|.++|||++|+|+++|+++++|++|
T Consensus         2 ~~i~~~~~G~pe~l~~~e~~~P~p~~~eVlVkv~a~~in~~D~~~~~G~~~~~~~p~~~G~e~~G~V~~vG~~v~~~~vG   81 (147)
T d1qora1           2 TRIEFHKHGGPEVLQAVEFTPADPAENEIQVENKAIGINFIDTYIRSGLYPPPSLPSGLGTEAAGIVSKVGSGVKHIKAG   81 (147)
T ss_dssp             EEEEBSSCCSGGGCEEEECCCCCCCTTEEEEEEEEEECCHHHHHHHHTSSCCSSSSBCCCSCEEEEEEEECTTCCSCCTT
T ss_pred             eEEEEcccCCCceeEEEEecCCCCCCCEEEEEEEEecccceeeeeecCCCCCCcceeeeccccccceeeeeeeccccccc
Confidence            34667778889999999999999999999999999999999999999998878899999999999999999999999999


Q ss_pred             CEEEeccccCCCCCCcccccCCCCCCcchhcccccccCCCCcCCCcceeEEeecCCceEECCCCCCcccc--cccchhhh
Q 018067           92 DKVGVGCMVGSCRSCDSCAIDLENYCPKVIMTYANKYHDGTITYGGYSDIMVADEHFVVRIPEGTPLDAT--APLLCAGI  169 (361)
Q Consensus        92 drV~~~~~~~~c~~c~~c~~~~~~~c~~~~~~~~~~~~~~~~~~g~~a~~v~v~~~~~~~ip~~~~~~~a--a~l~~~~~  169 (361)
                      |||+..                                  ....|+|+||+.++.+.++++|+++++++|  +++++...
T Consensus        82 drV~~~----------------------------------~~~~G~~ae~~~v~~~~~~~~P~~~~~~~a~a~~~~~~~~  127 (147)
T d1qora1          82 DRVVYA----------------------------------QSALGAYSSVHNIIADKAAILPAAIKVDVAEQQKYPLKDA  127 (147)
T ss_dssp             CEEEES----------------------------------CCSSCCSBSEEEEEGGGEEECCTTSCCCCCGGGEEEGGGH
T ss_pred             ceeeee----------------------------------ccccccceeEEEEehHHeEEcCcccchHHHHHHHHHHHHH
Confidence            999642                                  235789999999999999999999988765  45566677


Q ss_pred             hhhhHhhhcCCCCCCCEEEE
Q 018067          170 TVYSPLRFYGLDKPGMHVGV  189 (361)
Q Consensus       170 ta~~~l~~~~~~~~g~~vlV  189 (361)
                      ++++++.+ .++++|++|||
T Consensus       128 ~~~~~l~~-~~~~~G~~VLI  146 (147)
T d1qora1         128 QRAHEILE-SRATQGSSLLI  146 (147)
T ss_dssp             HHHHHHHH-TTCCCBCCEEE
T ss_pred             HHHHHHHH-hCCCCCCEEEe
Confidence            77777765 45799999997

>d1piwa2 c.2.1.1 (A:153-320) Cinnamyl alcohol dehydrogenase, ADH6 {Baker's yeast (Saccharomyces cerevisiae) [TaxId: 4932]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Alcohol dehydrogenase-like, C-terminal domain
domain: Cinnamyl alcohol dehydrogenase, ADH6
species: Baker's yeast (Saccharomyces cerevisiae) [TaxId: 4932]

Probab=99.95  E-value=1.1e-27  Score=197.14  Aligned_cols=164  Identities=31%  Similarity=0.510  Sum_probs=145.0

Q ss_pred             CcccccccchhhhhhhhHhhhcCCCCCCCEEEEEcCChHHHHHHHHHHHcCCeEEEEeCCchhHHHHHHHcCCCEEecCC
Q 018067          157 PLDATAPLLCAGITVYSPLRFYGLDKPGMHVGVVGLGGLGHVAVKFAKAMGVKVTVISTSPSKKSEAIERLGADSFLVSR  236 (361)
Q Consensus       157 ~~~~aa~l~~~~~ta~~~l~~~~~~~~g~~vlV~Gag~vG~~a~~la~~~g~~vi~~~~~~~~~~~~~~~~g~~~vv~~~  236 (361)
                      +.+.||+++|++.|+|+++++. .+++|++|+|+|+|++|++++|+||.+|++|+++++++++++. ++++|+++++++.
T Consensus         2 p~e~AApl~cag~Ta~~al~~~-~~~~g~~vlI~GaG~vG~~a~q~ak~~G~~vi~~~~~~~k~~~-a~~lGa~~~i~~~   79 (168)
T d1piwa2           2 PSHLAAPLLCGGLTVYSPLVRN-GCGPGKKVGIVGLGGIGSMGTLISKAMGAETYVISRSSRKRED-AMKMGADHYIATL   79 (168)
T ss_dssp             CHHHHGGGGTHHHHHHHHHHHT-TCSTTCEEEEECCSHHHHHHHHHHHHHTCEEEEEESSSTTHHH-HHHHTCSEEEEGG
T ss_pred             CHHHHHHHHHHHHHHHHHHHHh-CcCCCCEEEEECCCCcchhHHHHhhhccccccccccchhHHHH-hhccCCcEEeecc
Confidence            4567899999999999999875 5899999999999999999999999999999999998887655 5899999999876


Q ss_pred             C-HHHHHHhcCCccEEEEcCCCcc--cHHHHHhccccCCEEEEecCCCCCcccChHHHHhCCcEEEecccCCHHHHHHHH
Q 018067          237 D-QDEMQAAMGTMDGIIDTVSAVH--PLMPLIGLLKSQGKLVLVGAPEKPLELPAFSLLMGRKIVGGSMIGGMKETQEMI  313 (361)
Q Consensus       237 ~-~~~~~~~~~g~d~vid~~g~~~--~~~~~~~~l~~~G~~v~~g~~~~~~~~~~~~~~~~~~~i~g~~~~~~~~~~~~~  313 (361)
                      + .+..+...+++|.++|++++..  .+..++++++++|+++.+|.++....++...++.|+++|.|++.++.+++++++
T Consensus        80 ~~~~~~~~~~~~~d~vi~~~~~~~~~~~~~~~~~l~~~G~iv~~G~~~~~~~~~~~~~~~k~~~i~Gs~~g~~~~~~e~l  159 (168)
T d1piwa2          80 EEGDWGEKYFDTFDLIVVCASSLTDIDFNIMPKAMKVGGRIVSISIPEQHEMLSLKPYGLKAVSISYSALGSIKELNQLL  159 (168)
T ss_dssp             GTSCHHHHSCSCEEEEEECCSCSTTCCTTTGGGGEEEEEEEEECCCCCSSCCEEECGGGCBSCEEEECCCCCHHHHHHHH
T ss_pred             chHHHHHhhhcccceEEEEecCCccchHHHHHHHhhccceEEEeccccccccccHHHHHhCCcEEEEEeeCCHHHHHHHH
Confidence            5 3556666779999999988643  467899999999999999988877788888889999999999999999999999


Q ss_pred             HHHHcCCCc
Q 018067          314 DFAAKHNIR  322 (361)
Q Consensus       314 ~ll~~~~~~  322 (361)
                      +|+++|+++
T Consensus       160 ~li~~gkIk  168 (168)
T d1piwa2         160 KLVSEKDIK  168 (168)
T ss_dssp             HHHHHTTCC
T ss_pred             HHHHhCCCC
Confidence            999999875

>d1llua2 c.2.1.1 (A:144-309) Alcohol dehydrogenase {Pseudomonas aeruginosa [TaxId: 287]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Alcohol dehydrogenase-like, C-terminal domain
domain: Alcohol dehydrogenase
species: Pseudomonas aeruginosa [TaxId: 287]

Probab=99.95  E-value=4e-27  Score=193.60  Aligned_cols=162  Identities=33%  Similarity=0.619  Sum_probs=145.0

Q ss_pred             CCcccccccchhhhhhhhHhhhcCCCCCCCEEEEEcCChHHHHHHHHHHHcCCeEEEEeCCchhHHHHHHHcCCCEEecC
Q 018067          156 TPLDATAPLLCAGITVYSPLRFYGLDKPGMHVGVVGLGGLGHVAVKFAKAMGVKVTVISTSPSKKSEAIERLGADSFLVS  235 (361)
Q Consensus       156 ~~~~~aa~l~~~~~ta~~~l~~~~~~~~g~~vlV~Gag~vG~~a~~la~~~g~~vi~~~~~~~~~~~~~~~~g~~~vv~~  235 (361)
                      +++++||+++|++.|||+++++. ++++|++|+|+|+|++|++++|+||.+|++|+++++++++++ .++++|+++++++
T Consensus         1 v~f~~aA~l~ca~~Ta~~al~~~-~~~~g~~VlV~GaG~vG~~~~~~ak~~G~~Vi~~~~~~~~~~-~a~~~Ga~~~i~~   78 (166)
T d1llua2           1 VEFAEIAPILCAGVTVYKGLKQT-NARPGQWVAISGIGGLGHVAVQYARAMGLHVAAIDIDDAKLE-LARKLGASLTVNA   78 (166)
T ss_dssp             SCHHHHGGGGTHHHHHHHHHHHH-TCCTTCEEEEECCSHHHHHHHHHHHHTTCEEEEEESCHHHHH-HHHHTTCSEEEET
T ss_pred             CCHHHHHHHHHHHHHHHHHHHHh-CCCCCCEEEEeeccccHHHHHHHHHHcCCccceecchhhHHH-hhhccCccccccc
Confidence            57899999999999999999874 589999999999999999999999999999999998887765 4589999999998


Q ss_pred             CCHHHHH---HhcCCccEEEEcCCCcccHHHHHhccccCCEEEEecCCCCCcccChHHHHhCCcEEEecccCCHHHHHHH
Q 018067          236 RDQDEMQ---AAMGTMDGIIDTVSAVHPLMPLIGLLKSQGKLVLVGAPEKPLELPAFSLLMGRKIVGGSMIGGMKETQEM  312 (361)
Q Consensus       236 ~~~~~~~---~~~~g~d~vid~~g~~~~~~~~~~~l~~~G~~v~~g~~~~~~~~~~~~~~~~~~~i~g~~~~~~~~~~~~  312 (361)
                      ++++..+   ....+.+.++++.++...++.++++++++|+++.+|.+.+...++...++.|+++|.|++.++.++++++
T Consensus        79 ~~~~~~~~~~~~~~g~~~~i~~~~~~~~~~~~~~~l~~~G~iv~~G~~~~~~~~~~~~~~~k~~~i~Gs~~~~~~d~~e~  158 (166)
T d1llua2          79 RQEDPVEAIQRDIGGAHGVLVTAVSNSAFGQAIGMARRGGTIALVGLPPGDFPTPIFDVVLKGLHIAGSIVGTRADLQEA  158 (166)
T ss_dssp             TTSCHHHHHHHHHSSEEEEEECCSCHHHHHHHHTTEEEEEEEEECCCCSSEEEEEHHHHHHTTCEEEECCSCCHHHHHHH
T ss_pred             cchhHHHHHHHhhcCCcccccccccchHHHHHHHHhcCCcEEEEEEecCCCccCCHHHHHhCCcEEEEEeecCHHHHHHH
Confidence            8765443   4456788888888888889999999999999999998877788999999999999999999999999999


Q ss_pred             HHHHHcC
Q 018067          313 IDFAAKH  319 (361)
Q Consensus       313 ~~ll~~~  319 (361)
                      ++|+++|
T Consensus       159 l~l~~~G  165 (166)
T d1llua2         159 LDFAGEG  165 (166)
T ss_dssp             HHHHHTT
T ss_pred             HHHHHCc
Confidence            9999987

>d1xa0a1 b.35.1.2 (A:1-118,A:295-328) B. subtilis YhfP homologue {Bacillus stearothermophilus [TaxId: 1422]}

class: All beta proteins
fold: GroES-like
superfamily: GroES-like
family: Alcohol dehydrogenase-like, N-terminal domain
domain: B. subtilis YhfP homologue
species: Bacillus stearothermophilus [TaxId: 1422]

Probab=99.94  E-value=8.5e-28  Score=194.25  Aligned_cols=149  Identities=23%  Similarity=0.260  Sum_probs=128.3

Q ss_pred             ccceeeeeecCCCCCccceeeccCCCCCCeEEEEEeeeccCcchHHhHhcCCCC-CCCCCcccccccEEEEEeCCCCCCC
Q 018067           10 PKNAFGWAAKDTSGVLSPFHFSRRATGEKDVTFKVTHCGICHSDLHMIKNEWGN-TIYPIVPGHEIVGVVTEVGSKVSKF   88 (361)
Q Consensus        10 ~~~~~~~~~~~~~~~l~~~~~~~p~~~~~evlV~v~~~~i~~~D~~~~~g~~~~-~~~p~~lG~e~~G~Vv~vG~~v~~~   88 (361)
                      +||++.+...+++..+++++++.|+|++|||||||+++|||++|++.+.|..+. ..+|+++|||++|+|++  +.++.|
T Consensus         3 ~~KA~v~~~~~~~~~~~i~~v~~P~~~~~eVlVkV~a~gin~~D~~~~~g~~~~~~~~p~v~g~e~~G~v~~--~~~~~~   80 (152)
T d1xa0a1           3 AFQAFVVNKTETEFTAGVQTISMDDLPEGDVLVRVHYSSVNYKDGLASIPDGKIVKTYPFVPGIDLAGVVVS--SQHPRF   80 (152)
T ss_dssp             EEEEEEEEEETTEEEEEEEEEEGGGSCSCSEEEEEEEEECCHHHHHHTSGGGSSCCSSSBCCCSEEEEEEEE--CCSSSC
T ss_pred             ceEEEEEEecCCceEEEEEEccCCCCCCCEEEEEEEEeCCChHHHHHHhhcccccccccceeeeeeeeeeec--cCCCcc
Confidence            899999988877777889999999999999999999999999999988886653 47899999999999999  556789


Q ss_pred             CCCCEEEeccccCCCCCCcccccCCCCCCcchhcccccccCCCCcCCCcceeEEeecCCceEECCCCCCcccccccchhh
Q 018067           89 KVGDKVGVGCMVGSCRSCDSCAIDLENYCPKVIMTYANKYHDGTITYGGYSDIMVADEHFVVRIPEGTPLDATAPLLCAG  168 (361)
Q Consensus        89 ~~GdrV~~~~~~~~c~~c~~c~~~~~~~c~~~~~~~~~~~~~~~~~~g~~a~~v~v~~~~~~~ip~~~~~~~aa~l~~~~  168 (361)
                      ++||+|+...+                             ..+...+|+|+||+.+|+++++++|+++++ +||+++++.
T Consensus        81 ~~g~~v~~~~~-----------------------------~~~~~~~G~~aEy~~v~~~~~~~iP~~l~~-~aa~l~~a~  130 (152)
T d1xa0a1          81 REGDEVIATGY-----------------------------EIGVTHFGGYSEYARLHGEWLVPLPKGLER-IAQEISLAE  130 (152)
T ss_dssp             CTTCEEEEEST-----------------------------TBTTTBCCSSBSEEEECGGGCEECCTTHHH-HEEEEEGGG
T ss_pred             ccCCEEEEecC-----------------------------ccccccCCCcceeeeehhhccccCCCCCCH-HHHHHHHHH
Confidence            99999974221                             113356799999999999999999999984 688899999


Q ss_pred             hhhhhHhhhcCCCCCCCEEEEEc
Q 018067          169 ITVYSPLRFYGLDKPGMHVGVVG  191 (361)
Q Consensus       169 ~ta~~~l~~~~~~~~g~~vlV~G  191 (361)
                      +|+|.++...++++ |++|||+|
T Consensus       131 ~ta~~~~~~~~~~~-G~tVL~l~  152 (152)
T d1xa0a1         131 LPQALKRILRGELR-GRTVVRLA  152 (152)
T ss_dssp             HHHHHHHHHHTCCC-SEEEEECC
T ss_pred             HHHHHHHHHhcCCC-CCEEEEcC
Confidence            99998888888765 99999975

>d1uufa2 c.2.1.1 (A:145-312) Hypothetical protein YahK {Escherichia coli [TaxId: 562]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Alcohol dehydrogenase-like, C-terminal domain
domain: Hypothetical protein YahK
species: Escherichia coli [TaxId: 562]

Probab=99.94  E-value=1.4e-26  Score=190.68  Aligned_cols=164  Identities=52%  Similarity=0.836  Sum_probs=142.7

Q ss_pred             CCcccccccchhhhhhhhHhhhcCCCCCCCEEEEEcCChHHHHHHHHHHHcCCeEEEEeCCchhHHHHHHHcCCCEEecC
Q 018067          156 TPLDATAPLLCAGITVYSPLRFYGLDKPGMHVGVVGLGGLGHVAVKFAKAMGVKVTVISTSPSKKSEAIERLGADSFLVS  235 (361)
Q Consensus       156 ~~~~~aa~l~~~~~ta~~~l~~~~~~~~g~~vlV~Gag~vG~~a~~la~~~g~~vi~~~~~~~~~~~~~~~~g~~~vv~~  235 (361)
                      .+++.+|+++|+..|+|+++++ .++++|++|+|+|+|++|++++|+||.+|+++++++++++++ ++++++|++.++++
T Consensus         4 ~~~a~~Apl~Cag~Tay~al~~-~~~~~G~~VlI~GaG~vG~~a~qlak~~Ga~~i~~~~~~~~~-~~a~~lGad~~i~~   81 (168)
T d1uufa2           4 EQLAAVAPLLCAGITTYSPLRH-WQAGPGKKVGVVGIGGLGHMGIKLAHAMGAHVVAFTTSEAKR-EAAKALGADEVVNS   81 (168)
T ss_dssp             GGHHHHGGGGTHHHHHHHHHHH-TTCCTTCEEEEECCSHHHHHHHHHHHHTTCEEEEEESSGGGH-HHHHHHTCSEEEET
T ss_pred             ccHHHHHHHHhHHHHHHHHHHH-hCCCCCCEEEEeccchHHHHHHHHhhcccccchhhccchhHH-HHHhccCCcEEEEC
Confidence            4566788899999999999975 668999999999999999999999999999999988888776 45589999999999


Q ss_pred             CCHHHHHHhcCCccEEEEcCCCcccHHHHHhccccCCEEEEecCCCCC-cccChHHHHhCCcEEEecccCCHHHHHHHHH
Q 018067          236 RDQDEMQAAMGTMDGIIDTVSAVHPLMPLIGLLKSQGKLVLVGAPEKP-LELPAFSLLMGRKIVGGSMIGGMKETQEMID  314 (361)
Q Consensus       236 ~~~~~~~~~~~g~d~vid~~g~~~~~~~~~~~l~~~G~~v~~g~~~~~-~~~~~~~~~~~~~~i~g~~~~~~~~~~~~~~  314 (361)
                      .+++......+++|++||++|++.++..++++++++|+++.+|...+. ..++...++.|+++|.|++.++.++++++++
T Consensus        82 ~~~~~~~~~~~~~D~vid~~g~~~~~~~~~~~l~~~G~iv~~G~~~~~~~~~~~~~l~~k~~~i~Gs~~~~~~d~~e~l~  161 (168)
T d1uufa2          82 RNADEMAAHLKSFDFILNTVAAPHNLDDFTTLLKRDGTMTLVGAPATPHKSPEVFNLIMKRRAIAGSMIGGIPETQEMLD  161 (168)
T ss_dssp             TCHHHHHTTTTCEEEEEECCSSCCCHHHHHTTEEEEEEEEECCCC-------CHHHHHTTTCEEEECCSCCHHHHHHHHH
T ss_pred             chhhHHHHhcCCCceeeeeeecchhHHHHHHHHhcCCEEEEeccCCCCcccccHHHHHHCCcEEEEEeecCHHHHHHHHH
Confidence            998877666679999999999988899999999999999999986654 4677788889999999999999999999999


Q ss_pred             HHHcCCC
Q 018067          315 FAAKHNI  321 (361)
Q Consensus       315 ll~~~~~  321 (361)
                      |+.++++
T Consensus       162 l~a~~~I  168 (168)
T d1uufa2         162 FCAEHGI  168 (168)
T ss_dssp             HHHHHTC
T ss_pred             HHHHcCC
Confidence            9998764

>d1f8fa2 c.2.1.1 (A:163-336) Benzyl alcohol dehydrogenase {Acinetobacter calcoaceticus [TaxId: 471]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Alcohol dehydrogenase-like, C-terminal domain
domain: Benzyl alcohol dehydrogenase
species: Acinetobacter calcoaceticus [TaxId: 471]

Probab=99.94  E-value=1.3e-26  Score=191.89  Aligned_cols=165  Identities=22%  Similarity=0.282  Sum_probs=141.5

Q ss_pred             CCcccccccchhhhhhhhHhhhcCCCCCCCEEEEEcCChHHHHHHHHHHHcCCeEEEEeCCchhHHHHHHHcCCCEEecC
Q 018067          156 TPLDATAPLLCAGITVYSPLRFYGLDKPGMHVGVVGLGGLGHVAVKFAKAMGVKVTVISTSPSKKSEAIERLGADSFLVS  235 (361)
Q Consensus       156 ~~~~~aa~l~~~~~ta~~~l~~~~~~~~g~~vlV~Gag~vG~~a~~la~~~g~~vi~~~~~~~~~~~~~~~~g~~~vv~~  235 (361)
                      ++++.|++++|++.|||+++.+.+++++|++|+|+|+|++|++++|+|+.+|++++++.+..+.+.++++++|+++++++
T Consensus         1 vP~e~aapl~ca~~Ta~~a~~~~~~~~~g~~VlI~G~G~iG~~~~~~ak~~g~~~v~~~~~~~~k~~~a~~~Ga~~~i~~   80 (174)
T d1f8fa2           1 VPIELLGPLGCGIQTGAGACINALKVTPASSFVTWGAGAVGLSALLAAKVCGASIIIAVDIVESRLELAKQLGATHVINS   80 (174)
T ss_dssp             SCGGGTGGGGTHHHHHHHHHHTTTCCCTTCEEEEESCSHHHHHHHHHHHHHTCSEEEEEESCHHHHHHHHHHTCSEEEET
T ss_pred             CCHHHHHHHhhHHHHHHHHHHHhhCCCCCCEEEEeCCCHHHhhhhhcccccccceeeeeccHHHHHHHHHHcCCeEEEeC
Confidence            46788999999999999999888889999999999999999999999999999766655555555666799999999998


Q ss_pred             CCHHH---HHHhcC-CccEEEEcCCCcccHHHHHhccccCCEEEEecCCC--CCcccChHHHHhCCcEEEecccCC---H
Q 018067          236 RDQDE---MQAAMG-TMDGIIDTVSAVHPLMPLIGLLKSQGKLVLVGAPE--KPLELPAFSLLMGRKIVGGSMIGG---M  306 (361)
Q Consensus       236 ~~~~~---~~~~~~-g~d~vid~~g~~~~~~~~~~~l~~~G~~v~~g~~~--~~~~~~~~~~~~~~~~i~g~~~~~---~  306 (361)
                      ++++.   ++++++ ++|+||||+|++.+++.++++++++|+++.+|...  ....++...++.|++++.|++.++   .
T Consensus        81 ~~~~~~~~i~~~t~gg~D~vid~~G~~~~~~~~~~~~~~~G~i~~~G~~~~~~~~~~~~~~~~~k~~~i~Gs~~g~~~~~  160 (174)
T d1f8fa2          81 KTQDPVAAIKEITDGGVNFALESTGSPEILKQGVDALGILGKIAVVGAPQLGTTAQFDVNDLLLGGKTILGVVEGSGSPK  160 (174)
T ss_dssp             TTSCHHHHHHHHTTSCEEEEEECSCCHHHHHHHHHTEEEEEEEEECCCCSTTCCCCCCHHHHHHTTCEEEECSGGGSCHH
T ss_pred             CCcCHHHHHHHHcCCCCcEEEEcCCcHHHHHHHHhcccCceEEEEEeecCCCcccccCHHHHHHCCCEEEEEEecCCChH
Confidence            87644   444544 79999999999887999999999999999999754  346788899999999999997644   5


Q ss_pred             HHHHHHHHHHHcCC
Q 018067          307 KETQEMIDFAAKHN  320 (361)
Q Consensus       307 ~~~~~~~~ll~~~~  320 (361)
                      ++++++++|+++|+
T Consensus       161 ~~~~~~~~l~~~Gk  174 (174)
T d1f8fa2         161 KFIPELVRLYQQGK  174 (174)
T ss_dssp             HHHHHHHHHHHTTS
T ss_pred             HHHHHHHHHHHcCC
Confidence            78999999999986

>d1rjwa2 c.2.1.1 (A:138-305) Alcohol dehydrogenase {Bacillus stearothermophilus [TaxId: 1422]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Alcohol dehydrogenase-like, C-terminal domain
domain: Alcohol dehydrogenase
species: Bacillus stearothermophilus [TaxId: 1422]

Probab=99.94  E-value=5.6e-26  Score=187.07  Aligned_cols=165  Identities=33%  Similarity=0.599  Sum_probs=148.2

Q ss_pred             CCcccccccchhhhhhhhHhhhcCCCCCCCEEEEEcCChHHHHHHHHHHHcCCeEEEEeCCchhHHHHHHHcCCCEEecC
Q 018067          156 TPLDATAPLLCAGITVYSPLRFYGLDKPGMHVGVVGLGGLGHVAVKFAKAMGVKVTVISTSPSKKSEAIERLGADSFLVS  235 (361)
Q Consensus       156 ~~~~~aa~l~~~~~ta~~~l~~~~~~~~g~~vlV~Gag~vG~~a~~la~~~g~~vi~~~~~~~~~~~~~~~~g~~~vv~~  235 (361)
                      +|+++||+++|++.|||+++++.. +++|++|||+|+|++|++++++++..|++|++++.+++++.. ++++|++.++++
T Consensus         1 ls~eeAA~l~~~~~Ta~~al~~~~-~~~g~~vlv~G~G~iG~~a~~~a~~~g~~v~~~~~~~~r~~~-~k~~Ga~~~~~~   78 (168)
T d1rjwa2           1 LSFEEAAPIFCAGVTTYKALKVTG-AKPGEWVAIYGIGGLGHVAVQYAKAMGLNVVAVDIGDEKLEL-AKELGADLVVNP   78 (168)
T ss_dssp             SCHHHHGGGGTHHHHHHHHHHHHT-CCTTCEEEEECCSTTHHHHHHHHHHTTCEEEEECSCHHHHHH-HHHTTCSEEECT
T ss_pred             CCHHHHHHHHHHHHHHHHHHHHhC-CCCCCEEEEeecccchhhhhHHHhcCCCeEeccCCCHHHhhh-hhhcCcceeccc
Confidence            589999999999999999998765 899999999999999999999999999999999888877654 489999999998


Q ss_pred             CCHH---HHHHhcCCccEEEEcCCCcccHHHHHhccccCCEEEEecCCCCCcccChHHHHhCCcEEEecccCCHHHHHHH
Q 018067          236 RDQD---EMQAAMGTMDGIIDTVSAVHPLMPLIGLLKSQGKLVLVGAPEKPLELPAFSLLMGRKIVGGSMIGGMKETQEM  312 (361)
Q Consensus       236 ~~~~---~~~~~~~g~d~vid~~g~~~~~~~~~~~l~~~G~~v~~g~~~~~~~~~~~~~~~~~~~i~g~~~~~~~~~~~~  312 (361)
                      .+++   .+...+.+.|.+++++++...+..++++++++|+++.+|.......++...++.+++++.|+..++.++++++
T Consensus        79 ~~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~a~~~l~~~G~i~~~g~~~~~~~~~~~~~~~~~~~i~gs~~~~~~~~~~~  158 (168)
T d1rjwa2          79 LKEDAAKFMKEKVGGVHAAVVTAVSKPAFQSAYNSIRRGGACVLVGLPPEEMPIPIFDTVLNGIKIIGSIVGTRKDLQEA  158 (168)
T ss_dssp             TTSCHHHHHHHHHSSEEEEEESSCCHHHHHHHHHHEEEEEEEEECCCCSSEEEEEHHHHHHTTCEEEECCSCCHHHHHHH
T ss_pred             ccchhhhhcccccCCCceEEeecCCHHHHHHHHHHhccCCceEecccccCCCCCCHHHHHHCCcEEEEEeeCCHHHHHHH
Confidence            8753   4555667877787888888889999999999999999999888888999999999999999999999999999


Q ss_pred             HHHHHcCCCc
Q 018067          313 IDFAAKHNIR  322 (361)
Q Consensus       313 ~~ll~~~~~~  322 (361)
                      ++++++|+++
T Consensus       159 l~l~~~Gkik  168 (168)
T d1rjwa2         159 LQFAAEGKVK  168 (168)
T ss_dssp             HHHHHTTSCC
T ss_pred             HHHHHhCCCC
Confidence            9999999985

>d1yb5a2 c.2.1.1 (A:121-294) Quinone oxidoreductase {Human (Homo sapiens) [TaxId: 9606]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Alcohol dehydrogenase-like, C-terminal domain
domain: Quinone oxidoreductase
species: Human (Homo sapiens) [TaxId: 9606]

Probab=99.94  E-value=2.3e-26  Score=190.45  Aligned_cols=161  Identities=22%  Similarity=0.298  Sum_probs=139.3

Q ss_pred             CCcccccccchhhhhhhhHhhhcCCCCCCCEEEEEcC-ChHHHHHHHHHHHcCCeEEEEeCCchhHHHHHHHcCCCEEec
Q 018067          156 TPLDATAPLLCAGITVYSPLRFYGLDKPGMHVGVVGL-GGLGHVAVKFAKAMGVKVTVISTSPSKKSEAIERLGADSFLV  234 (361)
Q Consensus       156 ~~~~~aa~l~~~~~ta~~~l~~~~~~~~g~~vlV~Ga-g~vG~~a~~la~~~g~~vi~~~~~~~~~~~~~~~~g~~~vv~  234 (361)
                      +|+++||++++++.|||+++.+.+++++|++|||+|+ |++|++++|+|+.+|++|++++++++++ ++++++|+++++|
T Consensus         1 ls~~~AA~l~~~~~TA~~al~~~~~~~~g~~VlV~Ga~G~vG~~aiq~a~~~G~~vi~~~~~~~~~-~~~~~~Ga~~vi~   79 (174)
T d1yb5a2           1 LDFKQGAAIGIPYFTAYRALIHSACVKAGESVLVHGASGGVGLAACQIARAYGLKILGTAGTEEGQ-KIVLQNGAHEVFN   79 (174)
T ss_dssp             SCHHHHTTTHHHHHHHHHHHHTTSCCCTTCEEEEETCSSHHHHHHHHHHHHTTCEEEEEESSHHHH-HHHHHTTCSEEEE
T ss_pred             CCHHHHHHhHHHHHHHHHHHHHHhCCCCCCEEEEEeccccccccccccccccCccccccccccccc-ccccccCcccccc
Confidence            5899999999999999999988888999999999997 9999999999999999999999987765 5558999999999


Q ss_pred             CCCHHHHHH---hcC--CccEEEEcCCCcccHHHHHhccccCCEEEEecCCCCCcccChHHHHhCCcEEEeccc--CCHH
Q 018067          235 SRDQDEMQA---AMG--TMDGIIDTVSAVHPLMPLIGLLKSQGKLVLVGAPEKPLELPAFSLLMGRKIVGGSMI--GGMK  307 (361)
Q Consensus       235 ~~~~~~~~~---~~~--g~d~vid~~g~~~~~~~~~~~l~~~G~~v~~g~~~~~~~~~~~~~~~~~~~i~g~~~--~~~~  307 (361)
                      +++++..++   .++  ++|++||++|+.. ++.++++++++|+++.+|.. +...++...++.|++++.|+..  .+.+
T Consensus        80 ~~~~~~~~~i~~~t~~~g~d~v~d~~g~~~-~~~~~~~l~~~G~iv~~G~~-~~~~~~~~~~~~k~~~i~g~~~~~~~~~  157 (174)
T d1yb5a2          80 HREVNYIDKIKKYVGEKGIDIIIEMLANVN-LSKDLSLLSHGGRVIVVGSR-GTIEINPRDTMAKESSIIGVTLFSSTKE  157 (174)
T ss_dssp             TTSTTHHHHHHHHHCTTCEEEEEESCHHHH-HHHHHHHEEEEEEEEECCCC-SCEEECTHHHHTTTCEEEECCGGGCCHH
T ss_pred             cccccHHHHhhhhhccCCceEEeecccHHH-HHHHHhccCCCCEEEEEecC-CCCCCCHHHHHHCCCEEEEEEecCCCHH
Confidence            988654443   333  7999999999865 99999999999999999974 4567888888999999999864  3567


Q ss_pred             HHHHHHHHHHcC
Q 018067          308 ETQEMIDFAAKH  319 (361)
Q Consensus       308 ~~~~~~~ll~~~  319 (361)
                      ++++++++++++
T Consensus       158 ~~~~~~~~l~~g  169 (174)
T d1yb5a2         158 EFQQYAAALQAG  169 (174)
T ss_dssp             HHHHHHHHHHHH
T ss_pred             HHHHHHHHHHHH
Confidence            888888887764

>d1iz0a1 b.35.1.2 (A:1-98,A:270-302) Quinone oxidoreductase {Thermus thermophilus [TaxId: 274]}

class: All beta proteins
fold: GroES-like
superfamily: GroES-like
family: Alcohol dehydrogenase-like, N-terminal domain
domain: Quinone oxidoreductase
species: Thermus thermophilus [TaxId: 274]

Probab=99.94  E-value=7.4e-27  Score=182.97  Aligned_cols=130  Identities=21%  Similarity=0.319  Sum_probs=115.2

Q ss_pred             cceeeeeecCCCCCccceeeccCCCCCCeEEEEEeeeccCcchHHhHhcCCCC-CCCCCcccccccEEEEEeCCCCCCCC
Q 018067           11 KNAFGWAAKDTSGVLSPFHFSRRATGEKDVTFKVTHCGICHSDLHMIKNEWGN-TIYPIVPGHEIVGVVTEVGSKVSKFK   89 (361)
Q Consensus        11 ~~~~~~~~~~~~~~l~~~~~~~p~~~~~evlV~v~~~~i~~~D~~~~~g~~~~-~~~p~~lG~e~~G~Vv~vG~~v~~~~   89 (361)
                      ||++.+..+++|  +++++++.|+|+++|||||++++|||++|++.++|.++. ..+|+++|||++|+|+          
T Consensus         1 MkA~~~~~~G~~--l~~~e~~~p~p~~~eVlVkv~a~gin~~D~~~~~G~~~~~~~~P~v~G~E~~G~Vv----------   68 (131)
T d1iz0a1           1 MKAWVLKRLGGP--LELVDLPEPEAEEGEVVLRVEAVGLNFADHLMRLGAYLTRLHPPFIPGMEVVGVVE----------   68 (131)
T ss_dssp             CEEEEECSTTSC--EEEEECCCCCCCTTEEEEEEEEEEECHHHHHHHHTCSSSCCCSSBCCCCEEEEEET----------
T ss_pred             CcEEEEccCCCC--CEEEEccCCCCCCCEEEEEEEEEeccccccccccccccccccceeEeeeeeEEeec----------
Confidence            778887766544  889999999999999999999999999999999997654 4789999999999993          


Q ss_pred             CCCEEEeccccCCCCCCcccccCCCCCCcchhcccccccCCCCcCCCcceeEEeecCCceEECCCCCCcccccccchhhh
Q 018067           90 VGDKVGVGCMVGSCRSCDSCAIDLENYCPKVIMTYANKYHDGTITYGGYSDIMVADEHFVVRIPEGTPLDATAPLLCAGI  169 (361)
Q Consensus        90 ~GdrV~~~~~~~~c~~c~~c~~~~~~~c~~~~~~~~~~~~~~~~~~g~~a~~v~v~~~~~~~ip~~~~~~~aa~l~~~~~  169 (361)
                       ||||+..                                   ..+|+|+||+.+++++++++|+++++++||++++.+.
T Consensus        69 -Gd~V~~~-----------------------------------~~~G~~aey~~v~~~~~~~~P~~~~~~~aa~~~~~~~  112 (131)
T d1iz0a1          69 -GRRYAAL-----------------------------------VPQGGLAERVAVPKGALLPLPEGRPVVGPVFPFAEAE  112 (131)
T ss_dssp             -TEEEEEE-----------------------------------CSSCCSBSEEEEEGGGCEECCTTCCCEEEEEEGGGHH
T ss_pred             -cceEEEE-----------------------------------eccCccceeeeeCHHHeEEccCCCCHHHHHHHHHHHH
Confidence             9999742                                   4579999999999999999999999999999999999


Q ss_pred             hhhhHhhhcCCCCCCCEEEEE
Q 018067          170 TVYSPLRFYGLDKPGMHVGVV  190 (361)
Q Consensus       170 ta~~~l~~~~~~~~g~~vlV~  190 (361)
                      |||+++.+.+  +.|++||++
T Consensus       113 Ta~~al~~~g--~~g~tvl~l  131 (131)
T d1iz0a1         113 AAFRALLDRG--HTGKVVVRL  131 (131)
T ss_dssp             HHHHHTTCTT--CCBEEEEEC
T ss_pred             HHHHHHHhcc--cCCCEEEEC
Confidence            9999998876  469998863

>d1jvba2 c.2.1.1 (A:144-313) Alcohol dehydrogenase {Archaeon Sulfolobus solfataricus [TaxId: 2287]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Alcohol dehydrogenase-like, C-terminal domain
domain: Alcohol dehydrogenase
species: Archaeon Sulfolobus solfataricus [TaxId: 2287]

Probab=99.93  E-value=4.6e-26  Score=187.90  Aligned_cols=163  Identities=29%  Similarity=0.372  Sum_probs=143.3

Q ss_pred             CCcccccccchhhhhhhhHhhhcCCCCCCCEEEEEcC-ChHHHHHHHHHHHcCC-eEEEEeCCchhHHHHHHHcCCCEEe
Q 018067          156 TPLDATAPLLCAGITVYSPLRFYGLDKPGMHVGVVGL-GGLGHVAVKFAKAMGV-KVTVISTSPSKKSEAIERLGADSFL  233 (361)
Q Consensus       156 ~~~~~aa~l~~~~~ta~~~l~~~~~~~~g~~vlV~Ga-g~vG~~a~~la~~~g~-~vi~~~~~~~~~~~~~~~~g~~~vv  233 (361)
                      +++.+||+++|++.|||+++++ .++++|++|+|+|+ |++|++++|+++++|+ +|++++.+++++ ++++++|+++++
T Consensus         1 l~~~eAA~l~c~~~Ta~~al~~-~~~~~g~~vlV~G~~G~vG~~~~~~~~~~g~~~V~~~~~~~~~~-~~~~~~Ga~~~i   78 (170)
T d1jvba2           1 LNAVEAAPLTCSGITTYRAVRK-ASLDPTKTLLVVGAGGGLGTMAVQIAKAVSGATIIGVDVREEAV-EAAKRAGADYVI   78 (170)
T ss_dssp             SCHHHHGGGGTHHHHHHHHHHH-TTCCTTCEEEEETTTSHHHHHHHHHHHHHTCCEEEEEESSHHHH-HHHHHHTCSEEE
T ss_pred             CCHHHHHHHHHHHHHHHHHHHH-hCCCCCCEEEEEeccccceeeeeecccccccccccccccchhhH-HHHHHcCCceee
Confidence            5788999999999999999976 45899999999996 9999999999999996 777777776665 555899999999


Q ss_pred             cCCCHHHHH---Hhc--CCccEEEEcCCCcccHHHHHhccccCCEEEEecCCCCCcccChHHHHhCCcEEEecccCCHHH
Q 018067          234 VSRDQDEMQ---AAM--GTMDGIIDTVSAVHPLMPLIGLLKSQGKLVLVGAPEKPLELPAFSLLMGRKIVGGSMIGGMKE  308 (361)
Q Consensus       234 ~~~~~~~~~---~~~--~g~d~vid~~g~~~~~~~~~~~l~~~G~~v~~g~~~~~~~~~~~~~~~~~~~i~g~~~~~~~~  308 (361)
                      ++++++..+   +.+  .++|++|||+|++.+++.++++++++|+++.+|.......++...++.|++++.|++.++.++
T Consensus        79 ~~~~~~~~~~~~~~~~~~~~d~vid~~g~~~~~~~a~~~l~~~G~iv~~G~~~~~~~~~~~~~~~k~i~i~Gs~~~~~~d  158 (170)
T d1jvba2          79 NASMQDPLAEIRRITESKGVDAVIDLNNSEKTLSVYPKALAKQGKYVMVGLFGADLHYHAPLITLSEIQFVGSLVGNQSD  158 (170)
T ss_dssp             ETTTSCHHHHHHHHTTTSCEEEEEESCCCHHHHTTGGGGEEEEEEEEECCSSCCCCCCCHHHHHHHTCEEEECCSCCHHH
T ss_pred             ccCCcCHHHHHHHHhhcccchhhhcccccchHHHhhhhhcccCCEEEEeccccCccccCHHHHHhCCcEEEEEecCCHHH
Confidence            988754433   333  369999999999887899999999999999999887788899999999999999999999999


Q ss_pred             HHHHHHHHHcCC
Q 018067          309 TQEMIDFAAKHN  320 (361)
Q Consensus       309 ~~~~~~ll~~~~  320 (361)
                      ++++++|+++||
T Consensus       159 ~~~~l~lv~~GK  170 (170)
T d1jvba2         159 FLGIMRLAEAGK  170 (170)
T ss_dssp             HHHHHHHHHTTS
T ss_pred             HHHHHHHHHcCC
Confidence            999999999986

>d1e3ia2 c.2.1.1 (A:168-341) Alcohol dehydrogenase {Mouse (Mus musculus), class II [TaxId: 10090]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Alcohol dehydrogenase-like, C-terminal domain
domain: Alcohol dehydrogenase
species: Mouse (Mus musculus), class II [TaxId: 10090]

Probab=99.93  E-value=2.2e-25  Score=183.76  Aligned_cols=162  Identities=20%  Similarity=0.324  Sum_probs=134.1

Q ss_pred             CcccccccchhhhhhhhHhhhcCCCCCCCEEEEEcCChHHHHHHHHHHHcCCe-EEEEeCCchhHHHHHHHcCCCEEecC
Q 018067          157 PLDATAPLLCAGITVYSPLRFYGLDKPGMHVGVVGLGGLGHVAVKFAKAMGVK-VTVISTSPSKKSEAIERLGADSFLVS  235 (361)
Q Consensus       157 ~~~~aa~l~~~~~ta~~~l~~~~~~~~g~~vlV~Gag~vG~~a~~la~~~g~~-vi~~~~~~~~~~~~~~~~g~~~vv~~  235 (361)
                      +++.||.++|++.|+|+++.+.+++++|++|+|+|+|++|++++|+|+.+|++ |++++.++ ++.++++++|+++++++
T Consensus         2 ~Le~aa~l~Ca~~T~~~a~~~~a~v~~G~~VlV~G~G~iGl~a~~~ak~~Ga~~Vi~~d~~~-~r~~~a~~~Ga~~~i~~   80 (174)
T d1e3ia2           2 NLERVCLIGCGFSSGYGAAINTAKVTPGSTCAVFGLGCVGLSAIIGCKIAGASRIIAIDING-EKFPKAKALGATDCLNP   80 (174)
T ss_dssp             CHHHHGGGGTHHHHHHHHHHTTSCCCTTCEEEEECCSHHHHHHHHHHHHTTCSEEEEECSCG-GGHHHHHHTTCSEEECG
T ss_pred             CHHHHHHhhhHHHHHHHHHHHhhCCCCCCEEEEECCChHHHHHHHHHHHhCCceeeeeccch-HHHHHHHHhCCCcccCC
Confidence            46789999999999999998888899999999999999999999999999995 55555555 45677799999999986


Q ss_pred             CCH----HHHH-Hhc-CCccEEEEcCCCcccHHHHHhccccC-CEEEEecCCCCCcccChHHHHhCCcEEEecccCC---
Q 018067          236 RDQ----DEMQ-AAM-GTMDGIIDTVSAVHPLMPLIGLLKSQ-GKLVLVGAPEKPLELPAFSLLMGRKIVGGSMIGG---  305 (361)
Q Consensus       236 ~~~----~~~~-~~~-~g~d~vid~~g~~~~~~~~~~~l~~~-G~~v~~g~~~~~~~~~~~~~~~~~~~i~g~~~~~---  305 (361)
                      ...    .... ... +|+|++|||+|++.+++.++++++++ |+++.+|.+.+...++...++. +.+|.|++.++   
T Consensus        81 ~~~~~~~~~~~~~~~~~G~d~vie~~G~~~~~~~a~~~~~~g~G~~v~vG~~~~~~~i~~~~~~~-~k~i~Gs~~Gs~~~  159 (174)
T d1e3ia2          81 RELDKPVQDVITELTAGGVDYSLDCAGTAQTLKAAVDCTVLGWGSCTVVGAKVDEMTIPTVDVIL-GRSINGTFFGGWKS  159 (174)
T ss_dssp             GGCSSCHHHHHHHHHTSCBSEEEESSCCHHHHHHHHHTBCTTTCEEEECCCSSSEEEEEHHHHHT-TCEEEECSGGGCCH
T ss_pred             ccchhhhhhhHhhhhcCCCcEEEEecccchHHHHHHHHhhcCCeEEEecCCCCCccccchHHHhc-cCEEEEEEeeCCCh
Confidence            532    2222 222 48999999999998899999999996 9999999987778888777654 56899987654   


Q ss_pred             HHHHHHHHHHHHcCC
Q 018067          306 MKETQEMIDFAAKHN  320 (361)
Q Consensus       306 ~~~~~~~~~ll~~~~  320 (361)
                      .++++++++++++||
T Consensus       160 ~~d~p~li~l~~~GK  174 (174)
T d1e3ia2         160 VDSVPNLVSDYKNKK  174 (174)
T ss_dssp             HHHHHHHHHHHHTTS
T ss_pred             HHHHHHHHHHHHCcC
Confidence            578889999998875

>d1h2ba2 c.2.1.1 (A:155-326) Alcohol dehydrogenase {Archaeon Aeropyrum pernix [TaxId: 56636]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Alcohol dehydrogenase-like, C-terminal domain
domain: Alcohol dehydrogenase
species: Archaeon Aeropyrum pernix [TaxId: 56636]

Probab=99.93  E-value=1.4e-25  Score=185.29  Aligned_cols=161  Identities=30%  Similarity=0.443  Sum_probs=138.1

Q ss_pred             cccccccchhhhhhhhHhhhcC-CCCCCCEEEEEcCChHHHHHHHHHHHcCC-eEEEEeCCchhHHHHHHHcCCCEEecC
Q 018067          158 LDATAPLLCAGITVYSPLRFYG-LDKPGMHVGVVGLGGLGHVAVKFAKAMGV-KVTVISTSPSKKSEAIERLGADSFLVS  235 (361)
Q Consensus       158 ~~~aa~l~~~~~ta~~~l~~~~-~~~~g~~vlV~Gag~vG~~a~~la~~~g~-~vi~~~~~~~~~~~~~~~~g~~~vv~~  235 (361)
                      +.++|+++|++.|||+++.+.. .+++|++|+|+|+|++|++++|+|+.+|+ +|++++++++ +.++++++|+++++++
T Consensus         6 l~eaA~l~~~~~Ta~~al~~~~~~~~~g~~vli~GaG~vG~~~~~~a~~~g~~~vv~~~~~~~-k~~~~~~~ga~~~i~~   84 (172)
T d1h2ba2           6 LVEMAPLADAGITAYRAVKKAARTLYPGAYVAIVGVGGLGHIAVQLLKVMTPATVIALDVKEE-KLKLAERLGADHVVDA   84 (172)
T ss_dssp             HHHTGGGGTHHHHHHHHHHHHHTTCCTTCEEEEECCSHHHHHHHHHHHHHCCCEEEEEESSHH-HHHHHHHTTCSEEEET
T ss_pred             HHHHhHHHhHHHHHHHHHHHhhhccCCCCEEEEeCCChHHHHHHHHHHhhcCcccccccchhH-HHHHHhhcccceeecC
Confidence            5678999999999999998866 47999999999999999999999999998 5555555554 4566689999999998


Q ss_pred             CCHH--HHHHhcC--CccEEEEcCCCcccHHHHHhccccCCEEEEecCCCCCcccChHHHHhCCcEEEecccCCHHHHHH
Q 018067          236 RDQD--EMQAAMG--TMDGIIDTVSAVHPLMPLIGLLKSQGKLVLVGAPEKPLELPAFSLLMGRKIVGGSMIGGMKETQE  311 (361)
Q Consensus       236 ~~~~--~~~~~~~--g~d~vid~~g~~~~~~~~~~~l~~~G~~v~~g~~~~~~~~~~~~~~~~~~~i~g~~~~~~~~~~~  311 (361)
                      ++++  ...+.+.  ++|++||++|+..+++.++++++++|+++.+|.. ...+++...++.|+++|.|++.++++++++
T Consensus        85 ~~~~~~~~~~~~~~~g~d~vid~~g~~~~~~~a~~~l~~~G~iv~~G~~-~~~~~~~~~l~~k~~~i~Gs~~~~~~d~~~  163 (172)
T d1h2ba2          85 RRDPVKQVMELTRGRGVNVAMDFVGSQATVDYTPYLLGRMGRLIIVGYG-GELRFPTIRVISSEVSFEGSLVGNYVELHE  163 (172)
T ss_dssp             TSCHHHHHHHHTTTCCEEEEEESSCCHHHHHHGGGGEEEEEEEEECCCS-SCCCCCHHHHHHTTCEEEECCSCCHHHHHH
T ss_pred             cccHHHHHHHhhCCCCceEEEEecCcchHHHHHHHHHhCCCEEEEEeCc-ccccCCHHHHHhCCcEEEEEEecCHHHHHH
Confidence            7643  3334443  7999999999987799999999999999999964 457888889999999999999999999999


Q ss_pred             HHHHHHcCC
Q 018067          312 MIDFAAKHN  320 (361)
Q Consensus       312 ~~~ll~~~~  320 (361)
                      +++|+++|+
T Consensus       164 ~l~l~~~GK  172 (172)
T d1h2ba2         164 LVTLALQGK  172 (172)
T ss_dssp             HHHHHHTTS
T ss_pred             HHHHHHcCC
Confidence            999999986

>d1xa0a2 c.2.1.1 (A:119-294) B. subtilis YhfP homologue {Bacillus stearothermophilus [TaxId: 1422]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Alcohol dehydrogenase-like, C-terminal domain
domain: B. subtilis YhfP homologue
species: Bacillus stearothermophilus [TaxId: 1422]

Probab=99.93  E-value=1.4e-25  Score=184.59  Aligned_cols=165  Identities=17%  Similarity=0.217  Sum_probs=135.8

Q ss_pred             CCcccccccchhhhhhhhHhh---hcCCCCCCCEEEEEcC-ChHHHHHHHHHHHcCCeEEEEeCCchhHHHHHHHcCCCE
Q 018067          156 TPLDATAPLLCAGITVYSPLR---FYGLDKPGMHVGVVGL-GGLGHVAVKFAKAMGVKVTVISTSPSKKSEAIERLGADS  231 (361)
Q Consensus       156 ~~~~~aa~l~~~~~ta~~~l~---~~~~~~~g~~vlV~Ga-g~vG~~a~~la~~~g~~vi~~~~~~~~~~~~~~~~g~~~  231 (361)
                      +|+++||+++++++|||++++   ..+..++|++|||+|+ |++|.+++|+|+..|++|+.+++++++.+.+ +++|+++
T Consensus         1 lS~~eAAal~~aglTA~~a~~~L~~~g~~~~g~~VLI~gaaGGVG~~aiQlak~~Ga~Viat~~s~~k~~~~-~~lGa~~   79 (176)
T d1xa0a2           1 LTLKEAMAIGTAGFTAALSIHRLEEHGLTPERGPVLVTGATGGVGSLAVSMLAKRGYTVEASTGKAAEHDYL-RVLGAKE   79 (176)
T ss_dssp             CCHHHHHHHHHHHHHHHHHHHHHHHTTCCGGGCCEEESSTTSHHHHHHHHHHHHTTCCEEEEESCTTCHHHH-HHTTCSE
T ss_pred             CCHHHHHHhhhHHHHHHHHHHHHHHhCCCCCCCEEEEEeccchHHHHHHHHHHHcCCceEEecCchHHHHHH-Hhcccce
Confidence            589999999999999996654   5677789999999987 9999999999999999999999988876555 8999999


Q ss_pred             EecCCCHH--HHHHhc-CCccEEEEcCCCcccHHHHHhccccCCEEEEecCCCC-CcccChHHHHhCCcEEEec--ccCC
Q 018067          232 FLVSRDQD--EMQAAM-GTMDGIIDTVSAVHPLMPLIGLLKSQGKLVLVGAPEK-PLELPAFSLLMGRKIVGGS--MIGG  305 (361)
Q Consensus       232 vv~~~~~~--~~~~~~-~g~d~vid~~g~~~~~~~~~~~l~~~G~~v~~g~~~~-~~~~~~~~~~~~~~~i~g~--~~~~  305 (361)
                      ++++++..  .+.... +++|+|||++|+.. +..++++|+++|+++.+|...+ ...++...++.|+++|.|.  ...+
T Consensus        80 vi~~~~~~~~~~~~~~~~gvD~vid~vgg~~-~~~~l~~l~~~Griv~~G~~~g~~~~~~~~~~~~k~~~i~Gv~~~~~~  158 (176)
T d1xa0a2          80 VLAREDVMAERIRPLDKQRWAAAVDPVGGRT-LATVLSRMRYGGAVAVSGLTGGAEVPTTVHPFILRGVSLLGIDSVYCP  158 (176)
T ss_dssp             EEECC---------CCSCCEEEEEECSTTTT-HHHHHHTEEEEEEEEECSCCSSSCCCCCSHHHHHTTCEEEECCSSSCC
T ss_pred             eeecchhHHHHHHHhhccCcCEEEEcCCchh-HHHHHHHhCCCceEEEeecccCcccCCCHHHHHHCCcEEEEEeCCcCC
Confidence            99987632  222222 38999999999987 9999999999999999998754 4688999999999999995  4555


Q ss_pred             HHHHHHHHHHHHcCCCce
Q 018067          306 MKETQEMIDFAAKHNIRA  323 (361)
Q Consensus       306 ~~~~~~~~~ll~~~~~~~  323 (361)
                      .+...++++.+ .++++|
T Consensus       159 ~~~~~~~~~~l-ag~lkP  175 (176)
T d1xa0a2         159 MDLRLRIWERL-AGDLKP  175 (176)
T ss_dssp             HHHHHHHHHHH-HTTTCC
T ss_pred             HHHHHHHHHHH-hcccCC
Confidence            67777777766 477776

>d1pl8a2 c.2.1.1 (A:146-316) Ketose reductase (sorbitol dehydrogenase) {Human (Homo sapiens) [TaxId: 9606]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Alcohol dehydrogenase-like, C-terminal domain
domain: Ketose reductase (sorbitol dehydrogenase)
species: Human (Homo sapiens) [TaxId: 9606]

Probab=99.93  E-value=4.7e-25  Score=181.95  Aligned_cols=163  Identities=22%  Similarity=0.211  Sum_probs=138.7

Q ss_pred             CCcccccccchhhhhhhhHhhhcCCCCCCCEEEEEcCChHHHHHHHHHHHcCC-eEEEEeCCchhHHHHHHHcCCCEEec
Q 018067          156 TPLDATAPLLCAGITVYSPLRFYGLDKPGMHVGVVGLGGLGHVAVKFAKAMGV-KVTVISTSPSKKSEAIERLGADSFLV  234 (361)
Q Consensus       156 ~~~~~aa~l~~~~~ta~~~l~~~~~~~~g~~vlV~Gag~vG~~a~~la~~~g~-~vi~~~~~~~~~~~~~~~~g~~~vv~  234 (361)
                      +|+++||.+ .++.+||+++++.. +++|++|+|+|+|++|++++|+|+.+|+ +|++++++++++ ++++++|++++++
T Consensus         1 vS~e~Aal~-epla~a~~a~~~~~-~~~gd~VlI~G~G~iG~~~~~~a~~~G~~~Vi~~d~~~~rl-~~a~~~Ga~~~~~   77 (171)
T d1pl8a2           1 VTFEEGALI-EPLSVGIHACRRGG-VTLGHKVLVCGAGPIGMVTLLVAKAMGAAQVVVTDLSATRL-SKAKEIGADLVLQ   77 (171)
T ss_dssp             SCHHHHHHH-HHHHHHHHHHHHHT-CCTTCEEEEECCSHHHHHHHHHHHHTTCSEEEEEESCHHHH-HHHHHTTCSEEEE
T ss_pred             CCHHHHHHH-HHHHHHHHHHHHhC-CCCCCEEEEECCCccHHHHHHHHHHcCCceEEeccCCHHHH-HHHHHhCCccccc
Confidence            578887744 67889999998754 8999999999999999999999999999 788888877765 5568999999888


Q ss_pred             CCCHH---HHHHhc----CCccEEEEcCCCcccHHHHHhccccCCEEEEecCCCCCcccChHHHHhCCcEEEecccCCHH
Q 018067          235 SRDQD---EMQAAM----GTMDGIIDTVSAVHPLMPLIGLLKSQGKLVLVGAPEKPLELPAFSLLMGRKIVGGSMIGGMK  307 (361)
Q Consensus       235 ~~~~~---~~~~~~----~g~d~vid~~g~~~~~~~~~~~l~~~G~~v~~g~~~~~~~~~~~~~~~~~~~i~g~~~~~~~  307 (361)
                      +.+.+   ..+.++    .++|++||++|++.+++.++++++++|+++.+|.+.....++...++.|+++|.|++.+ .+
T Consensus        78 ~~~~~~~~~~~~~~~~~g~g~Dvvid~~G~~~~~~~a~~~~~~gG~iv~~G~~~~~~~~~~~~~~~k~l~i~Gs~~~-~~  156 (171)
T d1pl8a2          78 ISKESPQEIARKVEGQLGCKPEVTIECTGAEASIQAGIYATRSGGTLVLVGLGSEMTTVPLLHAAIREVDIKGVFRY-CN  156 (171)
T ss_dssp             CSSCCHHHHHHHHHHHHTSCCSEEEECSCCHHHHHHHHHHSCTTCEEEECSCCCSCCCCCHHHHHHTTCEEEECCSC-SS
T ss_pred             ccccccccccccccccCCCCceEEEeccCCchhHHHHHHHhcCCCEEEEEecCCCCCccCHHHHHHCCcEEEEEeCC-Hh
Confidence            76542   222222    37999999999998899999999999999999998877889999999999999999875 45


Q ss_pred             HHHHHHHHHHcCCCc
Q 018067          308 ETQEMIDFAAKHNIR  322 (361)
Q Consensus       308 ~~~~~~~ll~~~~~~  322 (361)
                      +++++++++++|+++
T Consensus       157 ~~~~al~li~~gkid  171 (171)
T d1pl8a2         157 TWPVAISMLASKSVN  171 (171)
T ss_dssp             CHHHHHHHHHTTSCC
T ss_pred             HHHHHHHHHHcCCCC
Confidence            799999999999875

>d1vj0a2 c.2.1.1 (A:156-337) Hypothetical protein TM0436 {Thermotoga maritima [TaxId: 2336]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Alcohol dehydrogenase-like, C-terminal domain
domain: Hypothetical protein TM0436
species: Thermotoga maritima [TaxId: 2336]

Probab=99.92  E-value=3.5e-25  Score=184.59  Aligned_cols=161  Identities=24%  Similarity=0.384  Sum_probs=137.4

Q ss_pred             cccccccchhhhhhhhHhhhcCCCCCCCEEEEEcCChHHHHHHHHHHHcCC-eEEEEeCCchhHHHHHHHcCCCEEecCC
Q 018067          158 LDATAPLLCAGITVYSPLRFYGLDKPGMHVGVVGLGGLGHVAVKFAKAMGV-KVTVISTSPSKKSEAIERLGADSFLVSR  236 (361)
Q Consensus       158 ~~~aa~l~~~~~ta~~~l~~~~~~~~g~~vlV~Gag~vG~~a~~la~~~g~-~vi~~~~~~~~~~~~~~~~g~~~vv~~~  236 (361)
                      ++.+|.+.|++.|||+++.+.+++++|++|||+|+|++|++++|+|+++|+ +|++++++++++ ++++++|++++++++
T Consensus         3 ~~~~a~~~c~~~ta~~al~~~~~~~~G~~VlV~GaG~iG~~~~~~ak~~Ga~~Vi~~~~~~~~~-~~a~~lGa~~vi~~~   81 (182)
T d1vj0a2           3 LDVLAMAMCSGATAYHAFDEYPESFAGKTVVIQGAGPLGLFGVVIARSLGAENVIVIAGSPNRL-KLAEEIGADLTLNRR   81 (182)
T ss_dssp             HHHHHHHTTHHHHHHHHHHTCSSCCBTCEEEEECCSHHHHHHHHHHHHTTBSEEEEEESCHHHH-HHHHHTTCSEEEETT
T ss_pred             HHHHHHhhcHHHHHHHHHHHHhCCCCCCEEEEECCCccchhheecccccccccccccccccccc-cccccccceEEEecc
Confidence            456788899999999999999889999999999999999999999999998 788888888776 555899999999887


Q ss_pred             CHH------HHHHhcC--CccEEEEcCCCcccHHHHHhccccCCEEEEecCCCC--CcccChH-HHHhCCcEEEecccCC
Q 018067          237 DQD------EMQAAMG--TMDGIIDTVSAVHPLMPLIGLLKSQGKLVLVGAPEK--PLELPAF-SLLMGRKIVGGSMIGG  305 (361)
Q Consensus       237 ~~~------~~~~~~~--g~d~vid~~g~~~~~~~~~~~l~~~G~~v~~g~~~~--~~~~~~~-~~~~~~~~i~g~~~~~  305 (361)
                      +.+      .+.+++.  |+|+||||+|++.+++.++++++++|+++.+|...+  ++.++.. .++.|+++|.|++.++
T Consensus        82 ~~~~~~~~~~i~~~~~~~g~Dvvid~vG~~~~~~~a~~~l~~~G~iv~~G~~~~~~~~~~~~~~~l~~k~l~i~G~~~~~  161 (182)
T d1vj0a2          82 ETSVEERRKAIMDITHGRGADFILEATGDSRALLEGSELLRRGGFYSVAGVAVPQDPVPFKVYEWLVLKNATFKGIWVSD  161 (182)
T ss_dssp             TSCHHHHHHHHHHHTTTSCEEEEEECSSCTTHHHHHHHHEEEEEEEEECCCCSCCCCEEECHHHHTTTTTCEEEECCCCC
T ss_pred             ccchHHHHHHHHHhhCCCCceEEeecCCchhHHHHHHHHhcCCCEEEEEeecCCCCccccccHHHHHHCCcEEEEEEeCC
Confidence            642      2334443  799999999998879999999999999999997543  3455554 3678999999999999


Q ss_pred             HHHHHHHHHHHHcC
Q 018067          306 MKETQEMIDFAAKH  319 (361)
Q Consensus       306 ~~~~~~~~~ll~~~  319 (361)
                      .+++++++++++++
T Consensus       162 ~~~~~~~~~~i~~~  175 (182)
T d1vj0a2         162 TSHFVKTVSITSRN  175 (182)
T ss_dssp             HHHHHHHHHHHHTC
T ss_pred             HHHHHHHHHHHHHC
Confidence            99999999999876

>d1e3ja2 c.2.1.1 (A:143-312) Ketose reductase (sorbitol dehydrogenase) {Silverleaf whitefly (Bemisia argentifolii) [TaxId: 77855]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Alcohol dehydrogenase-like, C-terminal domain
domain: Ketose reductase (sorbitol dehydrogenase)
species: Silverleaf whitefly (Bemisia argentifolii) [TaxId: 77855]

Probab=99.92  E-value=1.1e-24  Score=179.59  Aligned_cols=161  Identities=22%  Similarity=0.222  Sum_probs=135.4

Q ss_pred             CCcccccccchhhhhhhhHhhhcCCCCCCCEEEEEcCChHHHHHHHHHHHcCCeEEEEeCCchhHHHHHHHcCCCEEecC
Q 018067          156 TPLDATAPLLCAGITVYSPLRFYGLDKPGMHVGVVGLGGLGHVAVKFAKAMGVKVTVISTSPSKKSEAIERLGADSFLVS  235 (361)
Q Consensus       156 ~~~~~aa~l~~~~~ta~~~l~~~~~~~~g~~vlV~Gag~vG~~a~~la~~~g~~vi~~~~~~~~~~~~~~~~g~~~vv~~  235 (361)
                      +|+++||.+ .++.+||+++++.. +++|++|+|+|+|++|++++|+|+.+|++|++++++++++ ++++++|++..++.
T Consensus         1 VS~e~Aal~-ePla~a~~a~~~~~-~~~g~~vlV~G~G~vG~~~~~~ak~~Ga~vi~v~~~~~r~-~~a~~~ga~~~~~~   77 (170)
T d1e3ja2           1 VSLEEGALL-EPLSVGVHACRRAG-VQLGTTVLVIGAGPIGLVSVLAAKAYGAFVVCTARSPRRL-EVAKNCGADVTLVV   77 (170)
T ss_dssp             SCHHHHHTH-HHHHHHHHHHHHHT-CCTTCEEEEECCSHHHHHHHHHHHHTTCEEEEEESCHHHH-HHHHHTTCSEEEEC
T ss_pred             CCHHHHHHH-HHHHHHHHHHHHhC-CCCCCEEEEEcccccchhhHhhHhhhcccccccchHHHHH-HHHHHcCCcEEEec
Confidence            578887754 57889999998765 8999999999999999999999999999999999988876 45589999876654


Q ss_pred             CC----H-HHHHHh---c-CCccEEEEcCCCcccHHHHHhccccCCEEEEecCCCCCcccChHHHHhCCcEEEecccCCH
Q 018067          236 RD----Q-DEMQAA---M-GTMDGIIDTVSAVHPLMPLIGLLKSQGKLVLVGAPEKPLELPAFSLLMGRKIVGGSMIGGM  306 (361)
Q Consensus       236 ~~----~-~~~~~~---~-~g~d~vid~~g~~~~~~~~~~~l~~~G~~v~~g~~~~~~~~~~~~~~~~~~~i~g~~~~~~  306 (361)
                      +.    . +....+   . .++|+||||+|++.+++.++++++++|+++.+|.+.....++...++.|+++|.|++.+. 
T Consensus        78 ~~~~~~~~~~~~~~~~~~g~g~D~vid~~g~~~~~~~a~~~~~~~G~iv~~G~~~~~~~~~~~~~~~k~i~i~gs~~~~-  156 (170)
T d1e3ja2          78 DPAKEEESSIIERIRSAIGDLPNVTIDCSGNEKCITIGINITRTGGTLMLVGMGSQMVTVPLVNACAREIDIKSVFRYC-  156 (170)
T ss_dssp             CTTTSCHHHHHHHHHHHSSSCCSEEEECSCCHHHHHHHHHHSCTTCEEEECSCCSSCCCCCHHHHHTTTCEEEECCSCS-
T ss_pred             cccccccchhhhhhhcccccCCceeeecCCChHHHHHHHHHHhcCCceEEEecCCCCCCcCHHHHHHCCCEEEEEECCH-
Confidence            32    1 222222   2 379999999999888999999999999999999987778889999999999999997654 


Q ss_pred             HHHHHHHHHHHcCC
Q 018067          307 KETQEMIDFAAKHN  320 (361)
Q Consensus       307 ~~~~~~~~ll~~~~  320 (361)
                      ++++++++++++|+
T Consensus       157 ~~~~~ai~li~~Gk  170 (170)
T d1e3ja2         157 NDYPIALEMVASGR  170 (170)
T ss_dssp             SCHHHHHHHHHTTS
T ss_pred             HHHHHHHHHHHcCC
Confidence            47999999999986

>d1o89a1 b.35.1.2 (A:1-115,A:293-323) Hypothetical protein YhdH {Escherichia coli [TaxId: 562]}

class: All beta proteins
fold: GroES-like
superfamily: GroES-like
family: Alcohol dehydrogenase-like, N-terminal domain
domain: Hypothetical protein YhdH
species: Escherichia coli [TaxId: 562]

Probab=99.92  E-value=2e-25  Score=178.29  Aligned_cols=135  Identities=18%  Similarity=0.234  Sum_probs=115.2

Q ss_pred             cceeeeeecCCCCCccceeeccCCCCCCeEEEEEeeeccCcchHHhHhcCCCC-CCCCCcccccccEEEEEeCCCCCCCC
Q 018067           11 KNAFGWAAKDTSGVLSPFHFSRRATGEKDVTFKVTHCGICHSDLHMIKNEWGN-TIYPIVPGHEIVGVVTEVGSKVSKFK   89 (361)
Q Consensus        11 ~~~~~~~~~~~~~~l~~~~~~~p~~~~~evlV~v~~~~i~~~D~~~~~g~~~~-~~~p~~lG~e~~G~Vv~vG~~v~~~~   89 (361)
                      ||++.+..++++..+++++++.|++++|||||||.++|||++|++...|.++. ..+|.++|+|++|+|+++|.  ..++
T Consensus         1 MkA~v~~~~~~~~~l~i~~v~~p~~~~geVlVkV~a~gin~~D~~~~~G~~~~~~~~p~v~G~e~~G~V~~~~~--~~~~   78 (146)
T d1o89a1           1 LQALLLEQQDGKTLASVQTLDESRLPEGDVTVDVHWSSLNYKDALAITGKGKIIRNFPMIPGIDFAGTVRTSED--PRFH   78 (146)
T ss_dssp             CEEEEEECC---CEEEEEECCGGGSCSCSEEEEEEEEECCHHHHHHHHTCSSCCCSSSBCCCSEEEEEEEEECS--TTCC
T ss_pred             CeEEEEEcCCCceEEEEEEcCCCCCCCCEEEEEEeeccCccceeeEEEeecccccccceeccccccccceeecc--CCcc
Confidence            78999988888888999999999999999999999999999999999997653 47889999999999999876  4699


Q ss_pred             CCCEEEeccccCCCCCCcccccCCCCCCcchhcccccccCCCCcCCCcceeEEeecCCceEECCCCCCcccccccchhhh
Q 018067           90 VGDKVGVGCMVGSCRSCDSCAIDLENYCPKVIMTYANKYHDGTITYGGYSDIMVADEHFVVRIPEGTPLDATAPLLCAGI  169 (361)
Q Consensus        90 ~GdrV~~~~~~~~c~~c~~c~~~~~~~c~~~~~~~~~~~~~~~~~~g~~a~~v~v~~~~~~~ip~~~~~~~aa~l~~~~~  169 (361)
                      +||+|.+....                             .+...+|+|+||+.+|+++++++|+++++++||++++++.
T Consensus        79 ~g~~v~~~~~~-----------------------------~g~~~~G~~Aey~~v~~~~vv~lP~~ls~~eAA~l~~a~~  129 (146)
T d1o89a1          79 AGQEVLLTGWG-----------------------------VGENHWGGLAEQARVKGDWLVAMPQGQAAKEISLSEAPNF  129 (146)
T ss_dssp             TTCEEEEECTT-----------------------------BTTTBCCSSBSEEEECGGGCEECCTTSCCEEECGGGHHHH
T ss_pred             ceeeEEeeccc-----------------------------ceecCCCcceeeeeeeeeeEEECCCCCCHHHHHHHHHHHH
Confidence            99999753211                             1345689999999999999999999999999999999999


Q ss_pred             hhhhHhh
Q 018067          170 TVYSPLR  176 (361)
Q Consensus       170 ta~~~l~  176 (361)
                      ||+..+.
T Consensus       130 tA~~~~~  136 (146)
T d1o89a1         130 AEAIINN  136 (146)
T ss_dssp             HHHHHTT
T ss_pred             HHHHHHH
Confidence            9876553

>d1p0fa2 c.2.1.1 (A:1164-1337) Alcohol dehydrogenase {Frog (Rana perezi) [TaxId: 8403]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Alcohol dehydrogenase-like, C-terminal domain
domain: Alcohol dehydrogenase
species: Frog (Rana perezi) [TaxId: 8403]

Probab=99.92  E-value=2e-24  Score=178.22  Aligned_cols=161  Identities=25%  Similarity=0.339  Sum_probs=130.5

Q ss_pred             cccccccchhhhhhhhHhhhcCCCCCCCEEEEEcCChHHHHHHHHHHHcCC-eEEEEeCCchhHHHHHHHcCCCEEecCC
Q 018067          158 LDATAPLLCAGITVYSPLRFYGLDKPGMHVGVVGLGGLGHVAVKFAKAMGV-KVTVISTSPSKKSEAIERLGADSFLVSR  236 (361)
Q Consensus       158 ~~~aa~l~~~~~ta~~~l~~~~~~~~g~~vlV~Gag~vG~~a~~la~~~g~-~vi~~~~~~~~~~~~~~~~g~~~vv~~~  236 (361)
                      +.+||.+.|++.|+|+++.+.+++++|++|+|+|+|++|++++|+|+++|+ +|+++++++++ .++++++|+++++|++
T Consensus         2 P~eaa~lgCa~~Ta~~a~~~~a~~~~G~~VlV~GaGgvGl~a~~~ak~~G~~~Vi~~d~~~~k-l~~a~~lGa~~~i~~~   80 (174)
T d1p0fa2           2 PLESCLIGCGFATGYGAAVNTAKVTPGSTCAVFGLGGVGFSAIVGCKAAGASRIIGVGTHKDK-FPKAIELGATECLNPK   80 (174)
T ss_dssp             CGGGGGGGTHHHHHHHHHHTTTCCCTTCEEEEECCSHHHHHHHHHHHHHTCSEEEEECSCGGG-HHHHHHTTCSEEECGG
T ss_pred             HHHHHhhhhHHHHHHHHHHHhhCCCCCCEEEEECCCchhHHHHHHHHHcCCceeeccCChHHH-HHHHHHcCCcEEEcCC
Confidence            567999999999999999888889999999999999999999999999998 56666666655 4666999999999876


Q ss_pred             CHH----HHHH-hc-CCccEEEEcCCCcccHHHHHhcccc-CCEEEEecCCCCC--cccChHHHHhCCcEEEecccCC--
Q 018067          237 DQD----EMQA-AM-GTMDGIIDTVSAVHPLMPLIGLLKS-QGKLVLVGAPEKP--LELPAFSLLMGRKIVGGSMIGG--  305 (361)
Q Consensus       237 ~~~----~~~~-~~-~g~d~vid~~g~~~~~~~~~~~l~~-~G~~v~~g~~~~~--~~~~~~~~~~~~~~i~g~~~~~--  305 (361)
                      +.+    .... .+ +|+|++||++|+..++..++..+++ +|+++.+|.....  +.+++..+ .++++|.|++.++  
T Consensus        81 ~~d~~~~~~~~~~~~~G~d~vid~~g~~~~~~~~~~~~~~~~G~~v~vG~~~~~~~~~~~~~~~-~~~~~i~Gs~~G~~~  159 (174)
T d1p0fa2          81 DYDKPIYEVICEKTNGGVDYAVECAGRIETMMNALQSTYCGSGVTVVLGLASPNERLPLDPLLL-LTGRSLKGSVFGGFK  159 (174)
T ss_dssp             GCSSCHHHHHHHHTTSCBSEEEECSCCHHHHHHHHHTBCTTTCEEEECCCCCTTCCEEECTHHH-HTTCEEEECSGGGCC
T ss_pred             CchhHHHHHHHHhcCCCCcEEEEcCCCchHHHHHHHHHHHhcCceEEEEEecCccccccCHHHH-hCCCEEEEEEeCCCC
Confidence            532    2222 23 3899999999999888889988876 5999999986544  34444444 4688999998544  


Q ss_pred             HHHHHHHHHHHHcCC
Q 018067          306 MKETQEMIDFAAKHN  320 (361)
Q Consensus       306 ~~~~~~~~~ll~~~~  320 (361)
                      .++++++++++.+|+
T Consensus       160 ~~d~~~lidl~~~gK  174 (174)
T d1p0fa2         160 GEEVSRLVDDYMKKK  174 (174)
T ss_dssp             GGGHHHHHHHHHTTS
T ss_pred             HHHHHHHHHHHHcCC
Confidence            578999999999885

>d1tt7a1 b.35.1.2 (A:2-127,A:295-330) Hypothetical protein YhfP {Bacillus subtilis [TaxId: 1423]}

class: All beta proteins
fold: GroES-like
superfamily: GroES-like
family: Alcohol dehydrogenase-like, N-terminal domain
domain: Hypothetical protein YhfP
species: Bacillus subtilis [TaxId: 1423]

Probab=99.92  E-value=8.8e-27  Score=190.27  Aligned_cols=152  Identities=18%  Similarity=0.100  Sum_probs=129.1

Q ss_pred             cccceeeeeecCCCCCccceeeccCCCCCCeEEEEEeeeccCcchHHhHhcCCCC-CCCCCcccccccEEEEEeCCCCCC
Q 018067            9 HPKNAFGWAAKDTSGVLSPFHFSRRATGEKDVTFKVTHCGICHSDLHMIKNEWGN-TIYPIVPGHEIVGVVTEVGSKVSK   87 (361)
Q Consensus         9 ~~~~~~~~~~~~~~~~l~~~~~~~p~~~~~evlV~v~~~~i~~~D~~~~~g~~~~-~~~p~~lG~e~~G~Vv~vG~~v~~   87 (361)
                      .+||++.+...+++..|++++++.|++++|||||||+++|||++|++.+.|..+. ..+|.++|+|++|+|++  +.+.+
T Consensus         2 ~~~ka~~~~~~g~~~~l~~~~v~~p~l~~~eVLVkV~a~gin~~D~~~~~g~~~~~~~~~~~~g~e~~G~v~~--~~~~~   79 (162)
T d1tt7a1           2 TLFQALQAEKNADDVSVHVKTISTEDLPKDGVLIKVAYSGINYKDGLAGKAGGNIVREYPLILGIDAAGTVVS--SNDPR   79 (162)
T ss_dssp             CEEEEEEECCGGGSCCCEEEEEESSSSCSSSEEEEECCEEECHHHHHHTSTTCTTCSSCSEECCSEEEEEEEE--CSSTT
T ss_pred             CcEEEEEEEecCCCeEEEEEEcCCCCCCCCEEEEEEEEecccchhhheeeecccccccceeeeeeeccccccc--ccccc
Confidence            3788999888888899999999999999999999999999999999999887653 36678999999999998  56678


Q ss_pred             CCCCCEEEeccccCCCCCCcccccCCCCCCcchhcccccccCCCCcCCCcceeEEeecCCceEECCCCCCcccccccchh
Q 018067           88 FKVGDKVGVGCMVGSCRSCDSCAIDLENYCPKVIMTYANKYHDGTITYGGYSDIMVADEHFVVRIPEGTPLDATAPLLCA  167 (361)
Q Consensus        88 ~~~GdrV~~~~~~~~c~~c~~c~~~~~~~c~~~~~~~~~~~~~~~~~~g~~a~~v~v~~~~~~~ip~~~~~~~aa~l~~~  167 (361)
                      +++||+|+....                             ..+...+|+|+||+.+|+++++++|+++++++||.+++.
T Consensus        80 ~~~g~~v~~~~~-----------------------------~~g~~~~G~~aey~~v~~~~l~~iP~~ls~~~Aa~~~~~  130 (162)
T d1tt7a1          80 FAEGDEVIATSY-----------------------------ELGVSRDGGLSEYASVPGDWLVPLPQNLSLKEAMVDQLL  130 (162)
T ss_dssp             CCTTCEEEEEST-----------------------------TBTTTBCCSSBSSEEECGGGEEECCTTCCHHHHHHSCST
T ss_pred             cccceeeEeeec-----------------------------cceeccccccceEEEecHHHEEECCCCCCHHHHHHHHHH
Confidence            999999975331                             113457899999999999999999999999999999999


Q ss_pred             hhhhhhHhhhcCCCCCCCEEEEEcC
Q 018067          168 GITVYSPLRFYGLDKPGMHVGVVGL  192 (361)
Q Consensus       168 ~~ta~~~l~~~~~~~~g~~vlV~Ga  192 (361)
                      ..|||.++... ....+++|||.|+
T Consensus       131 ~~ta~~~~~~~-~~~~~~~Vli~ga  154 (162)
T d1tt7a1         131 TIVDREVSLEE-TPGALKDILQNRI  154 (162)
T ss_dssp             TSEEEEECSTT-HHHHHHHTTTTCC
T ss_pred             HHHHHHHHHhc-CCCCCCEEEEECC
Confidence            99999876543 2455677777775

>d1iz0a2 c.2.1.1 (A:99-269) Quinone oxidoreductase {Thermus thermophilus [TaxId: 274]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Alcohol dehydrogenase-like, C-terminal domain
domain: Quinone oxidoreductase
species: Thermus thermophilus [TaxId: 274]

Probab=99.91  E-value=1e-24  Score=179.69  Aligned_cols=147  Identities=27%  Similarity=0.391  Sum_probs=122.2

Q ss_pred             CCcccccccchhhhhhhhHhhhcCCCCCCCEEEEEcC-ChHHHHHHHHHHHcCCeEEEEeCCchhHHHHHHHcCCCEEec
Q 018067          156 TPLDATAPLLCAGITVYSPLRFYGLDKPGMHVGVVGL-GGLGHVAVKFAKAMGVKVTVISTSPSKKSEAIERLGADSFLV  234 (361)
Q Consensus       156 ~~~~~aa~l~~~~~ta~~~l~~~~~~~~g~~vlV~Ga-g~vG~~a~~la~~~g~~vi~~~~~~~~~~~~~~~~g~~~vv~  234 (361)
                      +++++||++++++.|||+++++ .++++|++|||+|+ |++|++++|+|+.+|++|+++++++++++.+ +++|+++++|
T Consensus         1 ls~eeAA~l~~~~~TA~~al~~-~~~~~g~~VlI~ga~G~vG~~aiqlak~~G~~vi~~~~~~~~~~~~-~~lGa~~~i~   78 (171)
T d1iz0a2           1 LSPEEAAAFPVSFLTAYLALKR-AQARPGEKVLVQAAAGALGTAAVQVARAMGLRVLAAASRPEKLALP-LALGAEEAAT   78 (171)
T ss_dssp             CCHHHHHTSHHHHHHHHHHHHH-TTCCTTCEEEESSTTBHHHHHHHHHHHHTTCEEEEEESSGGGSHHH-HHTTCSEEEE
T ss_pred             CCHHHHHHHHHHHHHHHHHHHH-hCCCCCCEEEEEeccccchhhhhhhhcccccccccccccccccccc-cccccceeee
Confidence            5789999999999999999987 67899999999996 9999999999999999999999988776555 8999999999


Q ss_pred             CCCHHHHHHhcCCccEEEEcCCCcccHHHHHhccccCCEEEEecCCCC-CcccChHHHHhCCcEEEecccCCH
Q 018067          235 SRDQDEMQAAMGTMDGIIDTVSAVHPLMPLIGLLKSQGKLVLVGAPEK-PLELPAFSLLMGRKIVGGSMIGGM  306 (361)
Q Consensus       235 ~~~~~~~~~~~~g~d~vid~~g~~~~~~~~~~~l~~~G~~v~~g~~~~-~~~~~~~~~~~~~~~i~g~~~~~~  306 (361)
                      +.+.........|+|+|||++|. . +..++++++++|+++.+|..++ ...++...++.|++++.|++..+.
T Consensus        79 ~~~~~~~~~~~~g~D~v~d~~G~-~-~~~~~~~l~~~G~~v~~G~~~g~~~~~~~~~~~~k~~~i~g~~~~~~  149 (171)
T d1iz0a2          79 YAEVPERAKAWGGLDLVLEVRGK-E-VEESLGLLAHGGRLVYIGAAEGEVAPIPPLRLMRRNLAVLGFWLTPL  149 (171)
T ss_dssp             GGGHHHHHHHTTSEEEEEECSCT-T-HHHHHTTEEEEEEEEEC-------CCCCTTHHHHTTCEEEECCHHHH
T ss_pred             hhhhhhhhhccccccccccccch-h-HHHHHHHHhcCCcEEEEeCCCCCCCCccHHHHHHCCcEEEEEeCcCh
Confidence            87644333334589999999884 4 8999999999999999998654 457888888999999999976543

>d1jqba2 c.2.1.1 (A:1140-1313) Bacterial secondary alcohol dehydrogenase {Clostridium beijerinckii [TaxId: 1520]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Alcohol dehydrogenase-like, C-terminal domain
domain: Bacterial secondary alcohol dehydrogenase
species: Clostridium beijerinckii [TaxId: 1520]

Probab=99.91  E-value=1.3e-24  Score=179.23  Aligned_cols=163  Identities=19%  Similarity=0.276  Sum_probs=133.2

Q ss_pred             CCcccccccchhhhhhhhHhhhcCCCCCCCEEEEEcCChHHHHHHHHHHHcCC-eEEEEeCCchhHHHHHHHcCCCEEec
Q 018067          156 TPLDATAPLLCAGITVYSPLRFYGLDKPGMHVGVVGLGGLGHVAVKFAKAMGV-KVTVISTSPSKKSEAIERLGADSFLV  234 (361)
Q Consensus       156 ~~~~~aa~l~~~~~ta~~~l~~~~~~~~g~~vlV~Gag~vG~~a~~la~~~g~-~vi~~~~~~~~~~~~~~~~g~~~vv~  234 (361)
                      +|+++|+.+++++.|+|+++++ +.+++|++|+|+|+|++|++++|+|+.+|+ +|++++.+++| .++++++|++++++
T Consensus         1 ip~e~A~~l~~~~~ta~~a~~~-a~~~~g~~VlI~GaG~vGl~~~q~ak~~Ga~~Vi~~d~~~~r-~~~a~~lGa~~~i~   78 (174)
T d1jqba2           1 MPLENAVMITDMMTTGFHGAEL-ADIEMGSSVVVIGIGAVGLMGIAGAKLRGAGRIIGVGSRPIC-VEAAKFYGATDILN   78 (174)
T ss_dssp             SCHHHHHTTTTHHHHHHHHHHH-TTCCTTCCEEEECCSHHHHHHHHHHHTTTCSCEEEECCCHHH-HHHHHHHTCSEEEC
T ss_pred             CCHHHHHHhhhHHHHHHHHHHH-hCCCCCCEEEEEcCCcchhhhhhhhhcccccccccccchhhh-HHHHHhhCcccccc
Confidence            5789999999999999999976 568999999999999999999999999998 67777776655 56668999999999


Q ss_pred             CCCH---HHHHHhcC--CccEEEEcCCCcccHHHHHhccccCCEEEEecCCCCC--cccCh--HHHHhCCcEEEecccCC
Q 018067          235 SRDQ---DEMQAAMG--TMDGIIDTVSAVHPLMPLIGLLKSQGKLVLVGAPEKP--LELPA--FSLLMGRKIVGGSMIGG  305 (361)
Q Consensus       235 ~~~~---~~~~~~~~--g~d~vid~~g~~~~~~~~~~~l~~~G~~v~~g~~~~~--~~~~~--~~~~~~~~~i~g~~~~~  305 (361)
                      ++++   +.+.++++  |+|+||||+|++.+++.++++++++|+++.+|.....  +.++.  +....+++++.++....
T Consensus        79 ~~~~~~~~~v~~~t~g~G~D~vid~~g~~~~~~~a~~~~~~~G~iv~~G~~~~~~~~~~~~~~~~~~~~~~~i~g~~~~~  158 (174)
T d1jqba2          79 YKNGHIEDQVMKLTNGKGVDRVIMAGGGSETLSQAVKMVKPGGIISNINYHGSGDALLIPRVEWGCGMAHKTIKGGLCPG  158 (174)
T ss_dssp             GGGSCHHHHHHHHTTTSCEEEEEECSSCTTHHHHHHHHEEEEEEEEECCCCCSSSEEEEETTTTGGGTBCCEEEEBCCCC
T ss_pred             ccchhHHHHHHHHhhccCcceEEEccCCHHHHHHHHHHHhcCCEEEEEeecCCCCcCcCcHhHHHHHhCccEEEEecCCC
Confidence            8774   34555554  6999999999988799999999999999999986543  23322  22345889999987766


Q ss_pred             HH-HHHHHHHHHHcCC
Q 018067          306 MK-ETQEMIDFAAKHN  320 (361)
Q Consensus       306 ~~-~~~~~~~ll~~~~  320 (361)
                      .+ .++++++++++|+
T Consensus       159 ~r~~~e~l~~li~~gk  174 (174)
T d1jqba2         159 GRLRAERLRDMVVYNR  174 (174)
T ss_dssp             HHHHHHHHHHHHHTTS
T ss_pred             CcccHHHHHHHHHcCC
Confidence            54 4677888888875

>d2fzwa2 c.2.1.1 (A:163-338) Alcohol dehydrogenase {Human (Homo sapiens), different isozymes [TaxId: 9606]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Alcohol dehydrogenase-like, C-terminal domain
domain: Alcohol dehydrogenase
species: Human (Homo sapiens), different isozymes [TaxId: 9606]

Probab=99.91  E-value=7.8e-24  Score=175.40  Aligned_cols=164  Identities=18%  Similarity=0.196  Sum_probs=129.4

Q ss_pred             CcccccccchhhhhhhhHhhhcCCCCCCCEEEEEcCChHHHHHHHHHHHcCCeEEEEeCCchhHHHHHHHcCCCEEecCC
Q 018067          157 PLDATAPLLCAGITVYSPLRFYGLDKPGMHVGVVGLGGLGHVAVKFAKAMGVKVTVISTSPSKKSEAIERLGADSFLVSR  236 (361)
Q Consensus       157 ~~~~aa~l~~~~~ta~~~l~~~~~~~~g~~vlV~Gag~vG~~a~~la~~~g~~vi~~~~~~~~~~~~~~~~g~~~vv~~~  236 (361)
                      ++++||.++|++.|+|+++.+.+++++|++|||+|+|++|++++|+|+.+|+++++++++.+++.++++++|+++++++.
T Consensus         2 P~e~aa~l~ca~~Tay~al~~~~~~~~G~tVlI~GaGGvG~~aiq~ak~~G~~~vi~~~~~~~k~~~ak~lGa~~~i~~~   81 (176)
T d2fzwa2           2 PLDKVCLLGCGISTGYGAAVNTAKLEPGSVCAVFGLGGVGLAVIMGCKVAGASRIIGVDINKDKFARAKEFGATECINPQ   81 (176)
T ss_dssp             CHHHHGGGGTHHHHHHHHHHTTTCCCTTCEEEEECCSHHHHHHHHHHHHHTCSEEEEECSCGGGHHHHHHHTCSEEECGG
T ss_pred             CHHHHhHhhcHHHHHHHHHHHhhCCCCCCEEEEecchhHHHHHHHHHHHHhcCceEEEcccHHHHHHHHHhCCcEEEeCC
Confidence            57889999999999999998888899999999999999999999999999985444445455556777999999999885


Q ss_pred             CH-H----HHHHhc-CCccEEEEcCCCcccHHHHHhccccCCEEEEecCCCC--CcccChHHHHhCCcEEEecccCC---
Q 018067          237 DQ-D----EMQAAM-GTMDGIIDTVSAVHPLMPLIGLLKSQGKLVLVGAPEK--PLELPAFSLLMGRKIVGGSMIGG---  305 (361)
Q Consensus       237 ~~-~----~~~~~~-~g~d~vid~~g~~~~~~~~~~~l~~~G~~v~~g~~~~--~~~~~~~~~~~~~~~i~g~~~~~---  305 (361)
                      +. +    .++..+ +|+|++||++|+..++..+..+++++|+++.++....  .........+.++++|.|+..++   
T Consensus        82 ~~~~~~~~~~~~~~~~g~D~vid~~G~~~~~~~~~~~~~~g~~~~~v~~~~~~~~~~~~~~~~~~~~~~i~Gs~~G~~~~  161 (176)
T d2fzwa2          82 DFSKPIQEVLIEMTDGGVDYSFECIGNVKVMRAALEACHKGWGVSVVVGVAASGEEIATRPFQLVTGRTWKGTAFGGWKS  161 (176)
T ss_dssp             GCSSCHHHHHHHHTTSCBSEEEECSCCHHHHHHHHHTBCTTTCEEEECSCCCTTCCEEECTHHHHTTCEEEECSGGGCCH
T ss_pred             chhhHHHHHHHHHcCCCCcEeeecCCCHHHHHHHHHhhcCCceeEEEEeeccccccccccHHHHHCCCEEEEEeeeCCcH
Confidence            42 2    223333 3899999999998878899999999988887754332  22333333345789999998755   


Q ss_pred             HHHHHHHHHHHHcCC
Q 018067          306 MKETQEMIDFAAKHN  320 (361)
Q Consensus       306 ~~~~~~~~~ll~~~~  320 (361)
                      .+++.++++++++||
T Consensus       162 ~~d~~~li~l~~~GK  176 (176)
T d2fzwa2         162 VESVPKLVSEYMSKK  176 (176)
T ss_dssp             HHHHHHHHHHHHTTS
T ss_pred             HHHHHHHHHHHHcCC
Confidence            467888999998885

>d1pqwa_ c.2.1.1 (A:) Putative enoyl reductase domain of polyketide synthase {Mycobacterium tuberculosis [TaxId: 1773]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Alcohol dehydrogenase-like, C-terminal domain
domain: Putative enoyl reductase domain of polyketide synthase
species: Mycobacterium tuberculosis [TaxId: 1773]

Probab=99.91  E-value=1.1e-24  Score=181.76  Aligned_cols=164  Identities=19%  Similarity=0.250  Sum_probs=134.7

Q ss_pred             ccccccchhhhhhhhHhhhcCCCCCCCEEEEEcC-ChHHHHHHHHHHHcCCeEEEEeCCchhHHHHHHHcCCCEEecCCC
Q 018067          159 DATAPLLCAGITVYSPLRFYGLDKPGMHVGVVGL-GGLGHVAVKFAKAMGVKVTVISTSPSKKSEAIERLGADSFLVSRD  237 (361)
Q Consensus       159 ~~aa~l~~~~~ta~~~l~~~~~~~~g~~vlV~Ga-g~vG~~a~~la~~~g~~vi~~~~~~~~~~~~~~~~g~~~vv~~~~  237 (361)
                      +|||+++++++|||+++.+.+++++|++|||+|+ |++|++++|+|+.+|++|+++++++++.+ .++++|+++++++++
T Consensus         1 eeAA~l~~~~~TA~~al~~~~~~~~g~~VlI~ga~g~vG~~~iqla~~~g~~vi~~~~~~~~~~-~l~~~Ga~~vi~~~~   79 (183)
T d1pqwa_           1 NEAATFGVAYLTAWHSLCEVGRLSPGERVLIHSATGGVGMAAVSIAKMIGARIYTTAGSDAKRE-MLSRLGVEYVGDSRS   79 (183)
T ss_dssp             CHHHHHHHHHHHHHHHHHTTSCCCTTCEEEETTTTSHHHHHHHHHHHHHTCEEEEEESSHHHHH-HHHTTCCSEEEETTC
T ss_pred             CchhhhhHHHHHHHHHHHHHhCCCCCCEEEEECCCCCcccccchhhccccccceeeeccccccc-ccccccccccccCCc
Confidence            5799999999999999999999999999999986 99999999999999999999999887765 558999999999888


Q ss_pred             HHH---HHHhcC--CccEEEEcCCCcccHHHHHhccccCCEEEEecCCCCCcc-cChHHHHhCCcEEEecccCC------
Q 018067          238 QDE---MQAAMG--TMDGIIDTVSAVHPLMPLIGLLKSQGKLVLVGAPEKPLE-LPAFSLLMGRKIVGGSMIGG------  305 (361)
Q Consensus       238 ~~~---~~~~~~--g~d~vid~~g~~~~~~~~~~~l~~~G~~v~~g~~~~~~~-~~~~~~~~~~~~i~g~~~~~------  305 (361)
                      ++.   +.+.++  |+|++||++|++. ++.++++++++|+++.+|..+.... ......+.+++++.+.....      
T Consensus        80 ~~~~~~v~~~t~~~g~d~v~d~~g~~~-~~~~~~~l~~~G~~v~~G~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  158 (183)
T d1pqwa_          80 VDFADEILELTDGYGVDVVLNSLAGEA-IQRGVQILAPGGRFIELGKKDVYADASLGLAALAKSASFSVVDLDLNLKLQP  158 (183)
T ss_dssp             STHHHHHHHHTTTCCEEEEEECCCTHH-HHHHHHTEEEEEEEEECSCGGGTTTCEEEGGGGTTTCEEEECCHHHHHHHCH
T ss_pred             cCHHHHHHHHhCCCCEEEEEecccchH-HHHHHHHhcCCCEEEEEccCCCCCCcccchHHHhCCcEEEEEEccceeccCH
Confidence            654   444443  7999999999876 9999999999999999987543321 12223345888888875422      


Q ss_pred             ---HHHHHHHHHHHHcCCCcee
Q 018067          306 ---MKETQEMIDFAAKHNIRAD  324 (361)
Q Consensus       306 ---~~~~~~~~~ll~~~~~~~~  324 (361)
                         .+.++++++++++|++++.
T Consensus       159 ~~~~~~~~~v~~~i~~G~i~p~  180 (183)
T d1pqwa_         159 ARYRQLLQHILQHVADGKLEVL  180 (183)
T ss_dssp             HHHHHHHHHHHHHHHTTSSCCC
T ss_pred             HHHHHHHHHHHHHHHCCCCcee
Confidence               2568888899999999863

>d1gu7a2 c.2.1.1 (A:161-349) 2,4-dienoyl-CoA reductase {Yeast (Candida tropicalis) [TaxId: 5482]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Alcohol dehydrogenase-like, C-terminal domain
domain: 2,4-dienoyl-CoA reductase
species: Yeast (Candida tropicalis) [TaxId: 5482]

Probab=99.91  E-value=4.7e-24  Score=178.62  Aligned_cols=164  Identities=14%  Similarity=0.217  Sum_probs=136.4

Q ss_pred             CCcccccccchhhhhhhhHhhhcCCCCCCCEEEEE-cC-ChHHHHHHHHHHHcCCeEEEEeCCchhH---HHHHHHcCCC
Q 018067          156 TPLDATAPLLCAGITVYSPLRFYGLDKPGMHVGVV-GL-GGLGHVAVKFAKAMGVKVTVISTSPSKK---SEAIERLGAD  230 (361)
Q Consensus       156 ~~~~~aa~l~~~~~ta~~~l~~~~~~~~g~~vlV~-Ga-g~vG~~a~~la~~~g~~vi~~~~~~~~~---~~~~~~~g~~  230 (361)
                      +|+++||+++++++|||+++.+..++++|++|+|+ |+ |++|++++|+||.+|++||+++++.++.   .+..+++|++
T Consensus         1 ls~~~AA~l~~~~~TA~~~l~~~~~~~~g~~vli~~ga~g~vG~~aiqlAk~~Ga~vI~~v~~~~~~~~~~~~~~~lGad   80 (189)
T d1gu7a2           1 LTINQGATISVNPLTAYLMLTHYVKLTPGKDWFIQNGGTSAVGKYASQIGKLLNFNSISVIRDRPNLDEVVASLKELGAT   80 (189)
T ss_dssp             CCHHHHHTCTTHHHHHHHHHHSSSCCCTTTCEEEESCTTSHHHHHHHHHHHHHTCEEEEEECCCTTHHHHHHHHHHHTCS
T ss_pred             CCHHHHHHhhhHHHHHHHHHHHHhCCCCCCEEEEEeCCCchHHHHHHHHHhhcCCeEEEEEecccccchHHhhhhhcccc
Confidence            58999999999999999999999999999999997 55 9999999999999999999998776543   3345789999


Q ss_pred             EEecCCCHH------HHHHh----cCCccEEEEcCCCcccHHHHHhccccCCEEEEecCCCC-CcccChHHHHhCCcEEE
Q 018067          231 SFLVSRDQD------EMQAA----MGTMDGIIDTVSAVHPLMPLIGLLKSQGKLVLVGAPEK-PLELPAFSLLMGRKIVG  299 (361)
Q Consensus       231 ~vv~~~~~~------~~~~~----~~g~d~vid~~g~~~~~~~~~~~l~~~G~~v~~g~~~~-~~~~~~~~~~~~~~~i~  299 (361)
                      +++++++.+      .+.++    .+++|++||++|++. +..++++|+++|+++.+|..++ +..++...++.|++++.
T Consensus        81 ~vi~~~~~~~~~~~~~v~~~~~~~g~~vdvv~D~vg~~~-~~~~~~~l~~~G~~v~~G~~~~~~~~~~~~~l~~k~~~i~  159 (189)
T d1gu7a2          81 QVITEDQNNSREFGPTIKEWIKQSGGEAKLALNCVGGKS-STGIARKLNNNGLMLTYGGMSFQPVTIPTSLYIFKNFTSA  159 (189)
T ss_dssp             EEEEHHHHHCGGGHHHHHHHHHHHTCCEEEEEESSCHHH-HHHHHHTSCTTCEEEECCCCSSCCEEECHHHHHHSCCEEE
T ss_pred             EEEeccccchhHHHHHHHHHHhhccCCceEEEECCCcch-hhhhhhhhcCCcEEEEECCccCCCccCcHHHHHHCCcEEE
Confidence            999875432      23332    247999999999887 8999999999999999997654 56889999999999999


Q ss_pred             ecccCC---------HHHHHHHHHHHHcCC
Q 018067          300 GSMIGG---------MKETQEMIDFAAKHN  320 (361)
Q Consensus       300 g~~~~~---------~~~~~~~~~ll~~~~  320 (361)
                      |.+...         .+.++++++++++|+
T Consensus       160 G~~~~~~~~~~~~~~~~~~~~l~~l~~~Gk  189 (189)
T d1gu7a2         160 GFWVTELLKNNKELKTSTLNQIIAWYEEGK  189 (189)
T ss_dssp             ECCHHHHHTTCHHHHHHHHHHHHHHHHHTC
T ss_pred             EEEehHhhhhCHHHHHHHHHHHHHHHHcCC
Confidence            976543         245788888888875

>d1gu7a1 b.35.1.2 (A:23-160,A:350-386) 2,4-dienoyl-CoA reductase {Yeast (Candida tropicalis) [TaxId: 5482]}

class: All beta proteins
fold: GroES-like
superfamily: GroES-like
family: Alcohol dehydrogenase-like, N-terminal domain
domain: 2,4-dienoyl-CoA reductase
species: Yeast (Candida tropicalis) [TaxId: 5482]

Probab=99.90  E-value=1.3e-26  Score=192.12  Aligned_cols=156  Identities=19%  Similarity=0.221  Sum_probs=129.5

Q ss_pred             ccceeeeeecCCCCC---ccceeeccCCCCCCeEEEEEeeeccCcchHHhHhcCCCC----------CCCCCcccccccE
Q 018067           10 PKNAFGWAAKDTSGV---LSPFHFSRRATGEKDVTFKVTHCGICHSDLHMIKNEWGN----------TIYPIVPGHEIVG   76 (361)
Q Consensus        10 ~~~~~~~~~~~~~~~---l~~~~~~~p~~~~~evlV~v~~~~i~~~D~~~~~g~~~~----------~~~p~~lG~e~~G   76 (361)
                      +|+++.+..+++|..   ++..++|.|+|+++||||||++++||++|++.++|..+.          ..+|.++|+|++|
T Consensus         3 t~kA~v~~~~G~p~~~l~l~~~~~p~p~~~~~eVlVkv~a~~i~~~D~~~~~G~~~~~~~~~~~~~~~~~~~v~G~e~~g   82 (175)
T d1gu7a1           3 TAQAVLYTQHGEPKDVLFTQSFEIDDDNLAPNEVIVKTLGSPVNPSDINQIQGVYPSKPAKTTGFGTTEPAAPCGNEGLF   82 (175)
T ss_dssp             EEEEEEESSCSCHHHHCEEEEEEECTTSCCTTEEEEEEEEEEECHHHHHHHHTCSSCCCCCBSTTCCSSCBEECCSCCEE
T ss_pred             eeEEEEEccCCCcccccEEEEEECCCCCCCcCEEEEEEEEeccCcceeEEEecCcccccccccccCCCCCCccccccccc
Confidence            789999988777742   444577888899999999999999999999999886542          2567889999999


Q ss_pred             EEEEeCCCCCCCCCCCEEEeccccCCCCCCcccccCCCCCCcchhcccccccCCCCcCCCcceeEEeecCCceEECCCCC
Q 018067           77 VVTEVGSKVSKFKVGDKVGVGCMVGSCRSCDSCAIDLENYCPKVIMTYANKYHDGTITYGGYSDIMVADEHFVVRIPEGT  156 (361)
Q Consensus        77 ~Vv~vG~~v~~~~~GdrV~~~~~~~~c~~c~~c~~~~~~~c~~~~~~~~~~~~~~~~~~g~~a~~v~v~~~~~~~ip~~~  156 (361)
                      +|++.|..+..++.||||...                                  ....|+|+||+.+++++++++|+++
T Consensus        83 ~V~~~~~~~~~~~~g~~v~~~----------------------------------~~~~g~~aey~~v~~~~~~~iP~~~  128 (175)
T d1gu7a1          83 EVIKVGSNVSSLEAGDWVIPS----------------------------------HVNFGTWRTHALGNDDDFIKLPNPA  128 (175)
T ss_dssp             EEEEECTTCCSCCTTCEEEES----------------------------------SSCCCCSBSEEEEEGGGEEEECCHH
T ss_pred             ccccccccccccccccceecc----------------------------------ccccccccceeeehhhhccCCCccc
Confidence            999999999999999999753                                  2457889999999999999999987


Q ss_pred             CcccccccchhhhhhhhHhhh-cCCCCCCCEEEEEc-C-ChHHHHHHH
Q 018067          157 PLDATAPLLCAGITVYSPLRF-YGLDKPGMHVGVVG-L-GGLGHVAVK  201 (361)
Q Consensus       157 ~~~~aa~l~~~~~ta~~~l~~-~~~~~~g~~vlV~G-a-g~vG~~a~~  201 (361)
                      +.+.++  .+..+|||+++.. ...+++|++|||.| + |++|++++|
T Consensus       129 ~~~~a~--~~~~~ta~~~l~~~~~~~~~g~~vli~gaa~~gvG~~~iQ  174 (175)
T d1gu7a1         129 QSKANG--KPNGLTDAKSIETLYDGTKPLHELYQDGVANSKDGKQLIT  174 (175)
T ss_dssp             HHHHTT--CSCCCCCCCCEEEECCSSSCHHHHHHHHHHTGGGSCEEEE
T ss_pred             hhhhhc--cchHHHHHHHHHHHhcCCCCCCEEEEECccchhhhheEEe
Confidence            654443  4577889988764 46689999999987 4 779988776

>d1v3va2 c.2.1.1 (A:113-294) Leukotriene b4 12-hydroxydehydrogenase/prostaglandin 15-keto reductase {Guinea pig (Cavia porcellus) [TaxId: 10141]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Alcohol dehydrogenase-like, C-terminal domain
domain: Leukotriene b4 12-hydroxydehydrogenase/prostaglandin 15-keto reductase
species: Guinea pig (Cavia porcellus) [TaxId: 10141]

Probab=99.90  E-value=1.1e-23  Score=175.37  Aligned_cols=156  Identities=21%  Similarity=0.237  Sum_probs=128.8

Q ss_pred             cccchhhhhhhhHhhhcCCCCCCCEEEEEcC-ChHHHHHHHHHHHcCCeEEEEeCCchhHHHHHHHcCCCEEecCCCHHH
Q 018067          162 APLLCAGITVYSPLRFYGLDKPGMHVGVVGL-GGLGHVAVKFAKAMGVKVTVISTSPSKKSEAIERLGADSFLVSRDQDE  240 (361)
Q Consensus       162 a~l~~~~~ta~~~l~~~~~~~~g~~vlV~Ga-g~vG~~a~~la~~~g~~vi~~~~~~~~~~~~~~~~g~~~vv~~~~~~~  240 (361)
                      ++++++++|||++|++.+++++|++|||+|+ |++|++++|+|+..|++||.+++++++.+.+ +++|+++++++++++.
T Consensus         8 ~~lg~~glTA~~al~~~~~v~~G~~VlV~ga~ggvG~~aiqlak~~Ga~vi~~~~~~~~~~~~-~~~Ga~~vi~~~~~~~   86 (182)
T d1v3va2           8 GTIGMPGLTAYFGLLEVCGVKGGETVLVSAAAGAVGSVVGQIAKLKGCKVVGAAGSDEKIAYL-KQIGFDAAFNYKTVNS   86 (182)
T ss_dssp             TTTSHHHHHHHHHHHTTTCCCSSCEEEESSTTSHHHHHHHHHHHHTTCEEEEEESSHHHHHHH-HHTTCSEEEETTSCSC
T ss_pred             HHHhhHHHHHHHHHHHHhCCCCCCEEEEEeCCCchhHHHHHHHHccCCEEEEeCCCHHHHHHH-HhhhhhhhcccccccH
Confidence            5788999999999999999999999999987 9999999999999999999999988776554 8999999999887543


Q ss_pred             ---HHHhc--CCccEEEEcCCCcccHHHHHhccccCCEEEEecCCCC-------CcccChHHHHhCCcEEEecccCCH--
Q 018067          241 ---MQAAM--GTMDGIIDTVSAVHPLMPLIGLLKSQGKLVLVGAPEK-------PLELPAFSLLMGRKIVGGSMIGGM--  306 (361)
Q Consensus       241 ---~~~~~--~g~d~vid~~g~~~~~~~~~~~l~~~G~~v~~g~~~~-------~~~~~~~~~~~~~~~i~g~~~~~~--  306 (361)
                         +.+.+  .|+|+|||++|++. ++.++++++++|+++.+|..+.       +..++...++.|++++.|++...+  
T Consensus        87 ~~~~~~~~~~~Gvd~v~D~vG~~~-~~~~~~~l~~~G~~v~~G~~~~~~~~~~~~~~~~~~~l~~k~~ti~g~~~~~~~~  165 (182)
T d1v3va2          87 LEEALKKASPDGYDCYFDNVGGEF-LNTVLSQMKDFGKIAICGAISVYNRMDQLPPGPSPESIIYKQLRIEGFIVYRWQG  165 (182)
T ss_dssp             HHHHHHHHCTTCEEEEEESSCHHH-HHHHGGGEEEEEEEEECCCGGGTTCTTSCCBCCCHHHHHHTTCEEEECCGGGCCH
T ss_pred             HHHHHHHhhcCCCceeEEecCchh-hhhhhhhccCCCeEEeecceeeccccccCCCCcchHHHhhcCcEEEEEEEeccCh
Confidence               33333  37999999999876 9999999999999999996321       235667788999999999866442  


Q ss_pred             ----HHHHHHHHHHHcC
Q 018067          307 ----KETQEMIDFAAKH  319 (361)
Q Consensus       307 ----~~~~~~~~ll~~~  319 (361)
                          +.++++++++++|
T Consensus       166 ~~~~~~~~~l~~~i~~G  182 (182)
T d1v3va2         166 DVREKALRDLMKWVLEG  182 (182)
T ss_dssp             HHHHHHHHHHHHHHHTT
T ss_pred             HHHHHHHHHHHHHHhCc
Confidence                3366667777665

>d1cdoa2 c.2.1.1 (A:165-339) Alcohol dehydrogenase {Cod (Gadus callarias) [TaxId: 8053]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Alcohol dehydrogenase-like, C-terminal domain
domain: Alcohol dehydrogenase
species: Cod (Gadus callarias) [TaxId: 8053]

Probab=99.90  E-value=9.1e-23  Score=168.70  Aligned_cols=163  Identities=24%  Similarity=0.303  Sum_probs=132.0

Q ss_pred             CcccccccchhhhhhhhHhhhcCCCCCCCEEEEEcCChHHHHHHHHHHHcCC-eEEEEeCCchhHHHHHHHcCCCEEecC
Q 018067          157 PLDATAPLLCAGITVYSPLRFYGLDKPGMHVGVVGLGGLGHVAVKFAKAMGV-KVTVISTSPSKKSEAIERLGADSFLVS  235 (361)
Q Consensus       157 ~~~~aa~l~~~~~ta~~~l~~~~~~~~g~~vlV~Gag~vG~~a~~la~~~g~-~vi~~~~~~~~~~~~~~~~g~~~vv~~  235 (361)
                      ++++||.++|++.|+|+++.+.+++++|++|+|+|+|++|++++++++..|+ +|+++++++++ .++++++|+++++|+
T Consensus         2 P~e~aa~l~ca~~Tay~a~~~~a~~k~g~~VlI~G~Gg~g~~~~~~~~~~g~~~Vi~~~~~~~r-l~~a~~~GAd~~in~   80 (175)
T d1cdoa2           2 PLDTVCLLGCGVSTGFGAAVNTAKVEPGSTCAVFGLGAVGLAAVMGCHSAGAKRIIAVDLNPDK-FEKAKVFGATDFVNP   80 (175)
T ss_dssp             CHHHHGGGGTHHHHHHHHHHTTTCCCTTCEEEEECCSHHHHHHHHHHHHTTCSEEEEECSCGGG-HHHHHHTTCCEEECG
T ss_pred             CHHHHHHhhcHHHHHHHHHHHhhCCCCCCEEEEEecCCccchHHHHHHHHhhchheeecchHHH-HHHHHHcCCcEEEcC
Confidence            5788999999999999999888889999999999999999999999999988 66666666655 466689999999997


Q ss_pred             CCHH----HHHHhc--CCccEEEEcCCCcccHHHHHhccccCC-EEEEecCCCCCcccChHHHHhCCcEEEecccCC---
Q 018067          236 RDQD----EMQAAM--GTMDGIIDTVSAVHPLMPLIGLLKSQG-KLVLVGAPEKPLELPAFSLLMGRKIVGGSMIGG---  305 (361)
Q Consensus       236 ~~~~----~~~~~~--~g~d~vid~~g~~~~~~~~~~~l~~~G-~~v~~g~~~~~~~~~~~~~~~~~~~i~g~~~~~---  305 (361)
                      .+++    .....+  +|+|++||++|+..++..++.+++++| .++..|.......++....+.++++|.|+..++   
T Consensus        81 ~~~~~~~~~~~~~~~~~G~d~vid~~G~~~~~~~a~~~~~~g~~~~~~~g~~~~~~~~~~~~~~~~~~~i~Gs~~G~~~~  160 (175)
T d1cdoa2          81 NDHSEPISQVLSKMTNGGVDFSLECVGNVGVMRNALESCLKGWGVSVLVGWTDLHDVATRPIQLIAGRTWKGSMFGGFKG  160 (175)
T ss_dssp             GGCSSCHHHHHHHHHTSCBSEEEECSCCHHHHHHHHHTBCTTTCEEEECSCCSSSCEEECHHHHHTTCEEEECSGGGCCH
T ss_pred             CCcchhHHHHHHhhccCCcceeeeecCCHHHHHHHHHHhhCCCcceeEEEecCCcccCccHHHHHCCcEEEEEEEeCCcH
Confidence            6532    222332  489999999999887889999887765 555566655555566666677899999998655   


Q ss_pred             HHHHHHHHHHHHcCC
Q 018067          306 MKETQEMIDFAAKHN  320 (361)
Q Consensus       306 ~~~~~~~~~ll~~~~  320 (361)
                      +++++++++++.+|+
T Consensus       161 ~~d~~~~i~l~~~gK  175 (175)
T d1cdoa2         161 KDGVPKMVKAYLDKK  175 (175)
T ss_dssp             HHHHHHHHHHHHTTS
T ss_pred             HHHHHHHHHHHHcCC
Confidence            578999999999885

>d2jhfa2 c.2.1.1 (A:164-339) Alcohol dehydrogenase {Horse (Equus caballus) [TaxId: 9796]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Alcohol dehydrogenase-like, C-terminal domain
domain: Alcohol dehydrogenase
species: Horse (Equus caballus) [TaxId: 9796]

Probab=99.89  E-value=1.3e-22  Score=167.98  Aligned_cols=163  Identities=17%  Similarity=0.257  Sum_probs=128.4

Q ss_pred             CcccccccchhhhhhhhHhhhcCCCCCCCEEEEEcCChHHHHHHHHHHHcCC-eEEEEeCCchhHHHHHHHcCCCEEecC
Q 018067          157 PLDATAPLLCAGITVYSPLRFYGLDKPGMHVGVVGLGGLGHVAVKFAKAMGV-KVTVISTSPSKKSEAIERLGADSFLVS  235 (361)
Q Consensus       157 ~~~~aa~l~~~~~ta~~~l~~~~~~~~g~~vlV~Gag~vG~~a~~la~~~g~-~vi~~~~~~~~~~~~~~~~g~~~vv~~  235 (361)
                      ++++||.++|++.|+|+++.+.+++++|++|||+|+|++|++++++++.+|+ +|+++++++++ .++++++|+++++++
T Consensus         2 Ple~aa~l~ca~~Tay~al~~~~~vk~GdtVlV~GaGG~G~~~~~~~~~~g~~~Vi~~~~~~~k-~~~a~~~Ga~~~i~~   80 (176)
T d2jhfa2           2 PLEKVCLIGCGFSTGYGSAVKVAKVTQGSTCAVFGLGGVGLSVIMGCKAAGAARIIGVDINKDK-FAKAKEVGATECVNP   80 (176)
T ss_dssp             CHHHHGGGGTHHHHHHHHHHTTTCCCTTCEEEEECCSHHHHHHHHHHHHTTCSEEEEECSCGGG-HHHHHHTTCSEEECG
T ss_pred             CHHHHhHhhcHHHHHHHHHHHhhCCCCCCEEEEECCCCcHHHHHHHHHHcCCceEEeecCcHHH-HHHHHHhCCeeEEec
Confidence            5788999999999999999888899999999999999999999999999987 77776666665 456689999998887


Q ss_pred             CCH-H---HH-HHhc-CCccEEEEcCCCcccHHHHHhccccCCEEEEec-CCCCCc-ccChHHHHhCCcEEEecccCC--
Q 018067          236 RDQ-D---EM-QAAM-GTMDGIIDTVSAVHPLMPLIGLLKSQGKLVLVG-APEKPL-ELPAFSLLMGRKIVGGSMIGG--  305 (361)
Q Consensus       236 ~~~-~---~~-~~~~-~g~d~vid~~g~~~~~~~~~~~l~~~G~~v~~g-~~~~~~-~~~~~~~~~~~~~i~g~~~~~--  305 (361)
                      .+. +   .. .... +|+|++||++|.+..+..++..++++|+.+.++ ...... .+....++.++++|.|+..++  
T Consensus        81 ~~~~~~~~~~~~~~~~~G~D~vid~~G~~~~~~~a~~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~i~Gs~~G~~~  160 (176)
T d2jhfa2          81 QDYKKPIQEVLTEMSNGGVDFSFEVIGRLDTMVTALSCCQEAYGVSVIVGVPPDSQNLSMNPMLLLSGRTWKGAIFGGFK  160 (176)
T ss_dssp             GGCSSCHHHHHHHHTTSCBSEEEECSCCHHHHHHHHHHBCTTTCEEEECSCCCTTCCEEECTHHHHTTCEEEECSGGGCC
T ss_pred             CCchhHHHHHHHHHhcCCCCEEEecCCchhHHHHHHHHHhcCCcceEEecCCCCcccccccHHHHhCCCEEEEEEEeCCC
Confidence            542 2   22 2222 489999999999987889999998875555554 433322 223334556999999998765  


Q ss_pred             -HHHHHHHHHHHHcCC
Q 018067          306 -MKETQEMIDFAAKHN  320 (361)
Q Consensus       306 -~~~~~~~~~ll~~~~  320 (361)
                       .++++++++++.+|+
T Consensus       161 ~~~~~~~li~~~~~GK  176 (176)
T d2jhfa2         161 SKDSVPKLVADFMAKK  176 (176)
T ss_dssp             HHHHHHHHHHHHHTTS
T ss_pred             HHHHHHHHHHHHHCcC
Confidence             678999999998875

>d1qora2 c.2.1.1 (A:113-291) Quinone oxidoreductase {Escherichia coli [TaxId: 562]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Alcohol dehydrogenase-like, C-terminal domain
domain: Quinone oxidoreductase
species: Escherichia coli [TaxId: 562]

Probab=99.89  E-value=2e-23  Score=173.33  Aligned_cols=162  Identities=22%  Similarity=0.250  Sum_probs=128.1

Q ss_pred             CCcccccccchhhhhhhhHhhhcCCCCCCCEEEEEcC-ChHHHHHHHHHHHcCCeEEEEeCCchhHHHHHHHcCCCEEec
Q 018067          156 TPLDATAPLLCAGITVYSPLRFYGLDKPGMHVGVVGL-GGLGHVAVKFAKAMGVKVTVISTSPSKKSEAIERLGADSFLV  234 (361)
Q Consensus       156 ~~~~~aa~l~~~~~ta~~~l~~~~~~~~g~~vlV~Ga-g~vG~~a~~la~~~g~~vi~~~~~~~~~~~~~~~~g~~~vv~  234 (361)
                      +|+++||+++++++|||++|++.+++++|++|||+|+ |++|++++|+|+.+|++|+++++++++++.+ +++|+++++|
T Consensus         1 isfe~AA~~~~~~~TA~~al~~~~~l~~g~~Vlv~ga~g~vG~~~iqlak~~Ga~Vi~~~~s~~k~~~~-~~lGa~~vi~   79 (179)
T d1qora2           1 ISFEQAAASFLKGLTVYYLLRKTYEIKPDEQFLFHAAAGGVGLIACQWAKALGAKLIGTVGTAQKAQSA-LKAGAWQVIN   79 (179)
T ss_dssp             SCHHHHHHHHHHHHHHHHHHHTTSCCCTTCEEEESSTTBHHHHHHHHHHHHHTCEEEEEESSHHHHHHH-HHHTCSEEEE
T ss_pred             CCHHHHHHHHHHHHHHHHHHHHHhCCCCCCEEEEEccccccchHHHHHHHHhCCeEeecccchHHHHHH-HhcCCeEEEE
Confidence            5899999999999999999999988999999999976 8899999999999999999999998887555 8899999999


Q ss_pred             CCCHHH---HHHhcC--CccEEEEcCCCcccHHHHHhccccCCEEEEecCCCCC-cccChHHHHhC-CcEEEecc----c
Q 018067          235 SRDQDE---MQAAMG--TMDGIIDTVSAVHPLMPLIGLLKSQGKLVLVGAPEKP-LELPAFSLLMG-RKIVGGSM----I  303 (361)
Q Consensus       235 ~~~~~~---~~~~~~--g~d~vid~~g~~~~~~~~~~~l~~~G~~v~~g~~~~~-~~~~~~~~~~~-~~~i~g~~----~  303 (361)
                      +++++.   +.++++  ++|+++|++|++. +..++.+++++|+++.+|..... ..++...+..+ .+.+.+..    .
T Consensus        80 ~~~~d~~~~v~~~t~g~g~d~v~d~~g~~~-~~~~~~~l~~~G~~v~~g~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~  158 (179)
T d1qora2          80 YREEDLVERLKEITGGKKVRVVYDSVGRDT-WERSLDCLQRRGLMVSFGNSSGAVTGVNLGILNQKGSLYVTRPSLQGYI  158 (179)
T ss_dssp             TTTSCHHHHHHHHTTTCCEEEEEECSCGGG-HHHHHHTEEEEEEEEECCCTTCCCCCBCTHHHHHTTSCEEECCCHHHHC
T ss_pred             CCCCCHHHHHHHHhCCCCeEEEEeCccHHH-HHHHHHHHhcCCeeeecccccCCccccchhhhhccceEEEEeeEEeeec
Confidence            988654   445554  6999999999876 99999999999999999876543 34444444333 34433221    1


Q ss_pred             CCHH----HHHHHHHHHHcC
Q 018067          304 GGMK----ETQEMIDFAAKH  319 (361)
Q Consensus       304 ~~~~----~~~~~~~ll~~~  319 (361)
                      ...+    .++++++++++|
T Consensus       159 ~~~~~~~~~~~~l~~lv~~G  178 (179)
T d1qora2         159 TTREELTEASNELFSLIASG  178 (179)
T ss_dssp             CSHHHHHHHHHHHHHHHHTT
T ss_pred             CCHHHHHHHHHHHHHHHHCc
Confidence            2222    345566777765

>d1d1ta2 c.2.1.1 (A:163-338) Alcohol dehydrogenase {Human (Homo sapiens), different isozymes [TaxId: 9606]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Alcohol dehydrogenase-like, C-terminal domain
domain: Alcohol dehydrogenase
species: Human (Homo sapiens), different isozymes [TaxId: 9606]

Probab=99.89  E-value=1.2e-22  Score=167.78  Aligned_cols=161  Identities=21%  Similarity=0.340  Sum_probs=130.8

Q ss_pred             CCcccccccchhhhhhhhHhhhcCCCCCCCEEEEEcCChHHHHHHHHHHHcCC-eEEEEeCCchhHHHHHHHcCCCEEec
Q 018067          156 TPLDATAPLLCAGITVYSPLRFYGLDKPGMHVGVVGLGGLGHVAVKFAKAMGV-KVTVISTSPSKKSEAIERLGADSFLV  234 (361)
Q Consensus       156 ~~~~~aa~l~~~~~ta~~~l~~~~~~~~g~~vlV~Gag~vG~~a~~la~~~g~-~vi~~~~~~~~~~~~~~~~g~~~vv~  234 (361)
                      .++++||.++|++.|+|+++.+.+++++|++|+|+|+|++|++++|+++.+|+ +|++++.+++++ ++++++|+++++|
T Consensus         2 ~P~e~aa~l~Ca~~T~~~Av~~~~~~~~g~tVlI~G~GgvGl~ai~~ak~~G~~~Vi~vd~~~~kl-~~Ak~~GA~~~in   80 (176)
T d1d1ta2           2 APPEKVCLIGCGFSTGYGAAVKTGKVKPGSTCVVFGLGGVGLSVIMGCKSAGASRIIGIDLNKDKF-EKAMAVGATECIS   80 (176)
T ss_dssp             SCHHHHGGGGTHHHHHHHHHHTTSCCCTTCEEEEECCSHHHHHHHHHHHHTTCSEEEEECSCGGGH-HHHHHHTCSEEEC
T ss_pred             cCHHHHHhhhhHHHHHHHHHHHhhCCCCCCEEEEECCCchhHHHHHHHHHcCCceEEEecCcHHHH-HHHHhcCCcEEEC
Confidence            35889999999999999999888889999999999999999999999999996 788888887775 5669999999998


Q ss_pred             CCCHH----HHHHhc--CCccEEEEcCCCcccHHHHHhccccC-CEEEEecCCCCC--cccChHHHHhCCcEEEecccCC
Q 018067          235 SRDQD----EMQAAM--GTMDGIIDTVSAVHPLMPLIGLLKSQ-GKLVLVGAPEKP--LELPAFSLLMGRKIVGGSMIGG  305 (361)
Q Consensus       235 ~~~~~----~~~~~~--~g~d~vid~~g~~~~~~~~~~~l~~~-G~~v~~g~~~~~--~~~~~~~~~~~~~~i~g~~~~~  305 (361)
                      +++.+    .+.+.+  .|+|++||++|...++..++..+.++ |+++.+|.+...  ..+++..++ ++.+|.|+..++
T Consensus        81 ~~~~~~~~~~~~~~~~g~G~d~vi~~~g~~~~~~~a~~~~~~~~G~~v~vG~~~~~~~~~~~~~~~~-~~~~i~Gs~~G~  159 (176)
T d1d1ta2          81 PKDSTKPISEVLSEMTGNNVGYTFEVIGHLETMIDALASCHMNYGTSVVVGVPPSAKMLTYDPMLLF-TGRTWKGCVFGG  159 (176)
T ss_dssp             GGGCSSCHHHHHHHHHTSCCCEEEECSCCHHHHHHHHTTSCTTTCEEEECSCCCTTCCEEECTHHHH-TTCEEEECSGGG
T ss_pred             ccccchHHHHHHHHhccccceEEEEeCCchHHHHHHHHHhhcCCeEEEEEEccccccccCCCHHHHh-CCCEEEEEEEeC
Confidence            76532    223333  48999999999988788888877655 999999987544  345555544 678999998654


Q ss_pred             ---HHHHHHHHHHHHc
Q 018067          306 ---MKETQEMIDFAAK  318 (361)
Q Consensus       306 ---~~~~~~~~~ll~~  318 (361)
                         .+|++++++++.+
T Consensus       160 ~~~~~dip~li~~~~~  175 (176)
T d1d1ta2         160 LKSRDDVPKLVTEFLA  175 (176)
T ss_dssp             CCHHHHHHHHHHHHTT
T ss_pred             CCcHHHHHHHHHHHhC
Confidence               5788888887654

>d1vj1a2 c.2.1.1 (A:125-311) Putative zinc-binding alcohol dehydrogenase {Mouse (Mus musculus) [TaxId: 10090]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Alcohol dehydrogenase-like, C-terminal domain
domain: Putative zinc-binding alcohol dehydrogenase
species: Mouse (Mus musculus) [TaxId: 10090]

Probab=99.87  E-value=1.9e-22  Score=168.40  Aligned_cols=163  Identities=15%  Similarity=0.100  Sum_probs=124.7

Q ss_pred             CCcccccccchhhhhhhhHhhhcCCCCCC--CEEEEEcC-ChHHHHHHHHHHHcCCe-EEEEeCCchhHHHHHHHcCCCE
Q 018067          156 TPLDATAPLLCAGITVYSPLRFYGLDKPG--MHVGVVGL-GGLGHVAVKFAKAMGVK-VTVISTSPSKKSEAIERLGADS  231 (361)
Q Consensus       156 ~~~~~aa~l~~~~~ta~~~l~~~~~~~~g--~~vlV~Ga-g~vG~~a~~la~~~g~~-vi~~~~~~~~~~~~~~~~g~~~  231 (361)
                      +|+... +++++++|||+++...+++++|  ++|||+|+ |++|++++|+||.+|++ |+.++++++++.++++++|+++
T Consensus         2 ~~~~~g-alg~~glTA~~~l~~~~~~~~G~~etVLI~gaaGgVG~~aiQlak~~Ga~~vi~~~~~~e~~~~l~~~~gad~   80 (187)
T d1vj1a2           2 LSYFLG-AIGMPGLTSLIGVQEKGHISAGSNQTMVVSGAAGACGSLAGQIGHLLGCSRVVGICGTQEKCLFLTSELGFDA   80 (187)
T ss_dssp             GGGGGT-TTSHHHHHHHHHHHHHSCCCTTSCCEEEESSTTSTTGGGHHHHHHHTTCSEEEEEESSHHHHHHHHHHSCCSE
T ss_pred             ccHHHH-HhhcHHHHHHHHHHHHhCCCCCCCCEEEEECCCchhhHHHHHHHHHcCCcceecccchHHHHhhhhhcccceE
Confidence            445554 3778899999999999989987  88999986 99999999999999995 5556788888888888999999


Q ss_pred             EecCCCHHH---HHHhcC-CccEEEEcCCCcccHHHHHhccccCCEEEEecCCCCC-------ccc---ChHHHHhCCcE
Q 018067          232 FLVSRDQDE---MQAAMG-TMDGIIDTVSAVHPLMPLIGLLKSQGKLVLVGAPEKP-------LEL---PAFSLLMGRKI  297 (361)
Q Consensus       232 vv~~~~~~~---~~~~~~-g~d~vid~~g~~~~~~~~~~~l~~~G~~v~~g~~~~~-------~~~---~~~~~~~~~~~  297 (361)
                      ++|+++++.   +++++. |+|+|||++|++. ++..+++++++|+++.+|..++.       ...   ....+..|+++
T Consensus        81 vi~~~~~~~~~~~~~~~~~GvDvv~D~vGg~~-~~~~~~~l~~~G~iv~~G~~s~~~~~~~~~~~~~~~~~~~~~~k~i~  159 (187)
T d1vj1a2          81 AVNYKTGNVAEQLREACPGGVDVYFDNVGGDI-SNTVISQMNENSHIILCGQISQYNKDVPYPPPLPPAVEAIRKERNIT  159 (187)
T ss_dssp             EEETTSSCHHHHHHHHCTTCEEEEEESSCHHH-HHHHHTTEEEEEEEEEC------------CCCCCHHHHHHHHHTTCE
T ss_pred             EeeccchhHHHHHHHHhccCceEEEecCCchh-HHHHhhhccccccEEEeccccccccccccCCchHHHHHHHHHhcceE
Confidence            999988544   444443 8999999999877 99999999999999999964321       111   12335678999


Q ss_pred             EEecccCC-----HHHHHHHHHHHHcCC
Q 018067          298 VGGSMIGG-----MKETQEMIDFAAKHN  320 (361)
Q Consensus       298 i~g~~~~~-----~~~~~~~~~ll~~~~  320 (361)
                      +.|.....     .+.++++.+++++|+
T Consensus       160 ~~g~~~~~~~~~~~e~~~~l~~~i~~Gk  187 (187)
T d1vj1a2         160 RERFTVLNYKDKFEPGILQLSQWFKEGK  187 (187)
T ss_dssp             EEECCGGGCGGGHHHHHHHHHHHHHHTS
T ss_pred             EEEeEecchHHHHHHHHHHHHHHHHCcC
Confidence            98865432     244677777888775

>d1o89a2 c.2.1.1 (A:116-292) Hypothetical protein YhdH {Escherichia coli [TaxId: 562]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Alcohol dehydrogenase-like, C-terminal domain
domain: Hypothetical protein YhdH
species: Escherichia coli [TaxId: 562]

Probab=99.87  E-value=1.5e-22  Score=166.65  Aligned_cols=156  Identities=19%  Similarity=0.218  Sum_probs=128.8

Q ss_pred             CCcccccccchhhhhhhhHh---hhcCCCCCCCEEEEEcC-ChHHHHHHHHHHHcCCeEEEEeCCchhHHHHHHHcCCCE
Q 018067          156 TPLDATAPLLCAGITVYSPL---RFYGLDKPGMHVGVVGL-GGLGHVAVKFAKAMGVKVTVISTSPSKKSEAIERLGADS  231 (361)
Q Consensus       156 ~~~~~aa~l~~~~~ta~~~l---~~~~~~~~g~~vlV~Ga-g~vG~~a~~la~~~g~~vi~~~~~~~~~~~~~~~~g~~~  231 (361)
                      +++.+||+++++++|||+++   .+.+..+++++|||+|+ |++|++++|+||.+|++||++++++++.+.+ +++|+++
T Consensus         1 l~~~~Aa~lg~aGlTA~~a~~~l~~~g~~~~~~~vlV~gasGGVG~~aiQlAk~~Ga~Via~~~~~~k~~~~-~~lGad~   79 (177)
T d1o89a2           1 LDARKAMIIGTAGFTAMLCVMALEDAGVRPQDGEIVVTGASGGVGSTAVALLHKLGYQVVAVSGRESTHEYL-KSLGASR   79 (177)
T ss_dssp             CCHHHHHHHHHHHHHHHHHHHHHHHTTCCGGGCEEEESSTTSHHHHHHHHHHHHTTCCEEEEESCGGGHHHH-HHHTEEE
T ss_pred             CCHHHHHHcccHHHHHHHHHHHHHHhCCCCCCCcEEEEEccccchHHHHHHHHHcCCCeEEEecchhHHHHH-Hhhcccc
Confidence            57889999999999999765   44554456679999987 9999999999999999999999999887655 8999999


Q ss_pred             EecCCCHHHHHHhcC-CccEEEEcCCCcccHHHHHhccccCCEEEEecCCCC-CcccChHHHHhCCcEEEeccc--CCHH
Q 018067          232 FLVSRDQDEMQAAMG-TMDGIIDTVSAVHPLMPLIGLLKSQGKLVLVGAPEK-PLELPAFSLLMGRKIVGGSMI--GGMK  307 (361)
Q Consensus       232 vv~~~~~~~~~~~~~-g~d~vid~~g~~~~~~~~~~~l~~~G~~v~~g~~~~-~~~~~~~~~~~~~~~i~g~~~--~~~~  307 (361)
                      ++++++++..+.+.. ..|.++|++|++. +...+++++++|+++.+|..++ ...++...++.|++++.|+..  .+.+
T Consensus        80 vi~~~~~~~~~~l~~~~~~~vvD~Vgg~~-~~~~l~~l~~~Griv~~G~~~~~~~~~~~~~~~~k~~~i~G~~~~~~~~~  158 (177)
T d1o89a2          80 VLPRDEFAESRPLEKQVWAGAIDTVGDKV-LAKVLAQMNYGGCVAACGLAGGFTLPTTVMPFILRNVRLQGVDSVMTPPE  158 (177)
T ss_dssp             EEEGGGSSSCCSSCCCCEEEEEESSCHHH-HHHHHHTEEEEEEEEECCCTTCSCCCCCSHHHHHHCCEEEECCSSSCCHH
T ss_pred             ccccccHHHHHHHHhhcCCeeEEEcchHH-HHHHHHHhccccceEeecccCCccccccHHHHHHCCCeEEEEecccCCHH
Confidence            999887665544443 5899999999987 9999999999999999998754 467788888999999999644  4445


Q ss_pred             HHHHHH
Q 018067          308 ETQEMI  313 (361)
Q Consensus       308 ~~~~~~  313 (361)
                      ...+++
T Consensus       159 ~~~~~~  164 (177)
T d1o89a2         159 RRAQAW  164 (177)
T ss_dssp             HHHHHH
T ss_pred             HHHHHH
Confidence            444444

>d1kola2 c.2.1.1 (A:161-355) Formaldehyde dehydrogenase {Pseudomonas putida [TaxId: 303]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Alcohol dehydrogenase-like, C-terminal domain
domain: Formaldehyde dehydrogenase
species: Pseudomonas putida [TaxId: 303]

Probab=99.85  E-value=8.8e-21  Score=158.82  Aligned_cols=160  Identities=20%  Similarity=0.139  Sum_probs=127.5

Q ss_pred             ccccccchhhhhhhhHhhhcCCCCCCCEEEEEcCChHHHHHHHHHHHcCC-eEEEEeCCchhHHHHHHHcCCCEEecCCC
Q 018067          159 DATAPLLCAGITVYSPLRFYGLDKPGMHVGVVGLGGLGHVAVKFAKAMGV-KVTVISTSPSKKSEAIERLGADSFLVSRD  237 (361)
Q Consensus       159 ~~aa~l~~~~~ta~~~l~~~~~~~~g~~vlV~Gag~vG~~a~~la~~~g~-~vi~~~~~~~~~~~~~~~~g~~~vv~~~~  237 (361)
                      ++.+++...+.|||+++++ +++++|++|||+|+|++|++++++|+.+|+ +|++++.++++ .++++++|+++++++.+
T Consensus         2 ~d~~~l~d~~~ta~~a~~~-a~v~~G~tVlV~GaG~vGl~a~~~ak~~ga~~Vi~~d~~~~r-l~~a~~~Ga~~~~~~~~   79 (195)
T d1kola2           2 RDLTCLSDILPTGYHGAVT-AGVGPGSTVYVAGAGPVGLAAAASARLLGAAVVIVGDLNPAR-LAHAKAQGFEIADLSLD   79 (195)
T ss_dssp             HHHGGGGTHHHHHHHHHHH-TTCCTTCEEEEECCSHHHHHHHHHHHHTTCSEEEEEESCHHH-HHHHHHTTCEEEETTSS
T ss_pred             chHHhcccHHHHHHHHHHH-hCCCCCCEEEEECcCHHHHHHHHHHHhhcccceeeecccchh-hHhhhhccccEEEeCCC
Confidence            3567788999999999976 569999999999999999999999999999 67777776655 56669999999998877


Q ss_pred             HH---HHHHhcC--CccEEEEcCCCc---------------ccHHHHHhccccCCEEEEecCCCC-------------Cc
Q 018067          238 QD---EMQAAMG--TMDGIIDTVSAV---------------HPLMPLIGLLKSQGKLVLVGAPEK-------------PL  284 (361)
Q Consensus       238 ~~---~~~~~~~--g~d~vid~~g~~---------------~~~~~~~~~l~~~G~~v~~g~~~~-------------~~  284 (361)
                      .+   .+.++++  |+|++||++|.+               .+++.++++++++|+++.+|...+             .+
T Consensus        80 ~~~~~~i~~~t~g~g~D~vid~vG~~~~~~~~~~~~~~~~~~~l~~~~~~~r~gG~v~~~G~~~~~~~~~~~~~~~~~~~  159 (195)
T d1kola2          80 TPLHEQIAALLGEPEVDCAVDAVGFEARGHGHEGAKHEAPATVLNSLMQVTRVAGKIGIPGLYVTEDPGAVDAAAKIGSL  159 (195)
T ss_dssp             SCHHHHHHHHHSSSCEEEEEECCCTTCBCSSTTGGGSBCTTHHHHHHHHHEEEEEEEEECSCCCSCCTTCSSHHHHTTCC
T ss_pred             cCHHHHHHHHhCCCCcEEEEECccccccCCcccceeecCcHHHHHHHHHHHhcCCEEEEeeecCCCcccchhhhhhcCce
Confidence            54   3444554  799999999943               458999999999999999997542             12


Q ss_pred             ccChHHHHhCCcEEEecccCCHHHHHHHHHHHHcCC
Q 018067          285 ELPAFSLLMGRKIVGGSMIGGMKETQEMIDFAAKHN  320 (361)
Q Consensus       285 ~~~~~~~~~~~~~i~g~~~~~~~~~~~~~~ll~~~~  320 (361)
                      .+....++.|+++|.+......+.++++++++.+++
T Consensus       160 ~~~~~~~~~k~~~i~~g~~~v~~~~~~Ll~~I~~~k  195 (195)
T d1kola2         160 SIRFGLGWAKSHSFHTGQTPVMKYNRALMQAIMWDR  195 (195)
T ss_dssp             CCCHHHHHHTTCEEEESSCCHHHHHHHHHHHHHTTS
T ss_pred             eeeHHHHHhhcceeccCCCchHHHHHHHHHHHHcCC
Confidence            345556677999987655544566788999988764

>d1tt7a2 c.2.1.1 (A:128-294) Hypothetical protein YhfP {Bacillus subtilis [TaxId: 1423]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Alcohol dehydrogenase-like, C-terminal domain
domain: Hypothetical protein YhfP
species: Bacillus subtilis [TaxId: 1423]

Probab=99.84  E-value=3.5e-21  Score=156.85  Aligned_cols=155  Identities=19%  Similarity=0.273  Sum_probs=121.2

Q ss_pred             hhhhhhhh---HhhhcCCCCCCCEEEEEcC-ChHHHHHHHHHHHcCCeEEEEeCCchhHHHHHHHcCCCEEecCCCHH--
Q 018067          166 CAGITVYS---PLRFYGLDKPGMHVGVVGL-GGLGHVAVKFAKAMGVKVTVISTSPSKKSEAIERLGADSFLVSRDQD--  239 (361)
Q Consensus       166 ~~~~ta~~---~l~~~~~~~~g~~vlV~Ga-g~vG~~a~~la~~~g~~vi~~~~~~~~~~~~~~~~g~~~vv~~~~~~--  239 (361)
                      ++++|||.   +|.+.+..+++++|||+|+ |++|++++|+||.+|++||.+++++++.+.+ +++|+++++++++..  
T Consensus         3 ~aGlTA~~a~~~L~~~g~~~~~~~VLV~gaaGgVG~~avQlAk~~Ga~Viat~~s~~k~~~~-~~lGad~vi~~~~~~~~   81 (167)
T d1tt7a2           3 TAGFTAALSVHRLEQNGLSPEKGSVLVTGATGGVGGIAVSMLNKRGYDVVASTGNREAADYL-KQLGASEVISREDVYDG   81 (167)
T ss_dssp             HHHHHHHHHHHHHHHTTCCGGGCCEEEESTTSHHHHHHHHHHHHHTCCEEEEESSSSTHHHH-HHHTCSEEEEHHHHCSS
T ss_pred             ChHHHHHHHHHHHHHhcCCCCCCEEEEeCCcchHHHHHHHHHHHcCCceEEEecCHHHHHHH-HhhcccceEeccchhch
Confidence            45667764   4566666678889999997 9999999999999999999999998887666 899999998765321  


Q ss_pred             HHHHh-cCCccEEEEcCCCcccHHHHHhccccCCEEEEecCCCC-CcccChHHHHhCCcEEEeccc--CCHHHHHHHHHH
Q 018067          240 EMQAA-MGTMDGIIDTVSAVHPLMPLIGLLKSQGKLVLVGAPEK-PLELPAFSLLMGRKIVGGSMI--GGMKETQEMIDF  315 (361)
Q Consensus       240 ~~~~~-~~g~d~vid~~g~~~~~~~~~~~l~~~G~~v~~g~~~~-~~~~~~~~~~~~~~~i~g~~~--~~~~~~~~~~~l  315 (361)
                      .+... .+++|+|||++|+.. +..++++++++|+++.+|...+ ...++...++.|++++.|...  .+.+...++.+.
T Consensus        82 ~~~~~~~~gvd~vid~vgg~~-~~~~~~~l~~~G~iv~~G~~~g~~~~~~~~~l~~k~~~i~G~~~~~~~~~~~~~~~~~  160 (167)
T d1tt7a2          82 TLKALSKQQWQGAVDPVGGKQ-LASLLSKIQYGGSVAVSGLTGGGEVPATVYPFILRGVSLLGIDSVYCPMDVRAAVWER  160 (167)
T ss_dssp             CCCSSCCCCEEEEEESCCTHH-HHHHHTTEEEEEEEEECCCSSCSCEEECSHHHHTSCCEEEECCSSSCCHHHHHHHHHH
T ss_pred             hhhcccCCCceEEEecCcHHH-HHHHHHHhccCceEEEeeccCCCcccCCHHHHHHCCcEEEEEecCCCCHHHHHHHHHH
Confidence            11111 137999999999988 9999999999999999998765 468888999999999999644  334555566555


Q ss_pred             HHcCCCce
Q 018067          316 AAKHNIRA  323 (361)
Q Consensus       316 l~~~~~~~  323 (361)
                      +. ++++|
T Consensus       161 l~-~~L~P  167 (167)
T d1tt7a2         161 MS-SDLKP  167 (167)
T ss_dssp             TT-TTSCC
T ss_pred             HH-hcCCC
Confidence            53 34543

>d1v3va1 b.35.1.2 (A:1-112,A:295-329) Leukotriene b4 12-hydroxydehydrogenase/prostaglandin 15-keto reductase {Guinea pig (Cavia porcellus) [TaxId: 10141]}

class: All beta proteins
fold: GroES-like
superfamily: GroES-like
family: Alcohol dehydrogenase-like, N-terminal domain
domain: Leukotriene b4 12-hydroxydehydrogenase/prostaglandin 15-keto reductase
species: Guinea pig (Cavia porcellus) [TaxId: 10141]

Probab=99.62  E-value=2.2e-15  Score=118.94  Aligned_cols=134  Identities=13%  Similarity=0.031  Sum_probs=97.5

Q ss_pred             ccceeeeeec--CCC--CCccceeeccCCCCCCeEEEEEeeeccCcchHHhHhcCCCCCCCCCcccccccEEEEEeCCCC
Q 018067           10 PKNAFGWAAK--DTS--GVLSPFHFSRRATGEKDVTFKVTHCGICHSDLHMIKNEWGNTIYPIVPGHEIVGVVTEVGSKV   85 (361)
Q Consensus        10 ~~~~~~~~~~--~~~--~~l~~~~~~~p~~~~~evlV~v~~~~i~~~D~~~~~g~~~~~~~p~~lG~e~~G~Vv~vG~~v   85 (361)
                      ..|.+.+..+  +.|  ++|++++.+.|+|++||||||+++.++++.......    .....-++..+++|+|++  |++
T Consensus         3 ~~k~~vl~~~P~G~P~~~~f~l~e~~ip~~~~gevLvk~~~~svDp~~R~~~~----~~~~g~~~~g~~vg~Vv~--S~~   76 (147)
T d1v3va1           3 KAKSWTLKKHFQGKPTQSDFELKTVELPPLKNGEVLLEALFLSVDPYMRIASK----RLKEGAVMMGQQVARVVE--SKN   76 (147)
T ss_dssp             EEEEEEESSCCCSSCCGGGEEEEEEECCCCCTTCEEEEEEEEECCTHHHHHGG----GSCTTSBCCCCEEEEEEE--ESC
T ss_pred             ccEEEEEccCCCCCCcccceEEEEEECCCCCCCEEEEEEEEEeEccccccccc----ccccCCccccceEEEEEE--eCC
Confidence            3445555443  223  458999999999999999999999999876543222    122334556688999998  677


Q ss_pred             CCCCCCCEEEeccccCCCCCCcccccCCCCCCcchhcccccccCCCCcCCCcceeEEeecCCceEECCCCCCcc-----c
Q 018067           86 SKFKVGDKVGVGCMVGSCRSCDSCAIDLENYCPKVIMTYANKYHDGTITYGGYSDIMVADEHFVVRIPEGTPLD-----A  160 (361)
Q Consensus        86 ~~~~~GdrV~~~~~~~~c~~c~~c~~~~~~~c~~~~~~~~~~~~~~~~~~g~~a~~v~v~~~~~~~ip~~~~~~-----~  160 (361)
                      ++|++||+|.                                      ..++|+||.+++++.+.++|+..+..     .
T Consensus        77 ~~f~~GD~V~--------------------------------------g~~gw~ey~v~~~~~l~kv~~~~~~~~~~~~~  118 (147)
T d1v3va1          77 SAFPAGSIVL--------------------------------------AQSGWTTHFISDGKGLEKLLTEWPDKKIQYHE  118 (147)
T ss_dssp             TTSCTTCEEE--------------------------------------ECCCSBSEEEECSSSCEECCTTCCTTSSCCCE
T ss_pred             CcccCCCEEE--------------------------------------EccCCEeEEEeccceeeEccccccccccchhh
Confidence            8899999996                                      24679999999999999998765433     3


Q ss_pred             ccccchhhhhh-hhHhhhcCCCCCCCEEEE
Q 018067          161 TAPLLCAGITV-YSPLRFYGLDKPGMHVGV  189 (361)
Q Consensus       161 aa~l~~~~~ta-~~~l~~~~~~~~g~~vlV  189 (361)
                      .+++....+|| |..+...  .+.|++|++
T Consensus       119 ~~~lG~~Gmtaay~gl~~~--~k~Getvv~  146 (147)
T d1v3va1         119 HVTKGFENMPAAFIEMLNG--ANLGKAVVT  146 (147)
T ss_dssp             EEEECGGGHHHHHHHHHTT--CCSSEEEEE
T ss_pred             hHhccccchHHHHHHhhCC--CCCCCEEEe
Confidence            45667777774 5455433  478999987

>d1o8ca2 c.2.1.1 (A:116-192) Hypothetical protein YhdH {Escherichia coli [TaxId: 562]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Alcohol dehydrogenase-like, C-terminal domain
domain: Hypothetical protein YhdH
species: Escherichia coli [TaxId: 562]

Probab=99.37  E-value=2.3e-13  Score=94.02  Aligned_cols=73  Identities=25%  Similarity=0.287  Sum_probs=63.5

Q ss_pred             CCcccccccchhhhhhhhHhh---hcCCCCCCCEEEEEcC-ChHHHHHHHHHHHcCCeEEEEeCCchhHHHHHHHcCC
Q 018067          156 TPLDATAPLLCAGITVYSPLR---FYGLDKPGMHVGVVGL-GGLGHVAVKFAKAMGVKVTVISTSPSKKSEAIERLGA  229 (361)
Q Consensus       156 ~~~~~aa~l~~~~~ta~~~l~---~~~~~~~g~~vlV~Ga-g~vG~~a~~la~~~g~~vi~~~~~~~~~~~~~~~~g~  229 (361)
                      +|+++|+.++++++|||.++.   +....+++++|||+|+ |++|.+++|+++.+|++|+++++++++.+.+ +++|+
T Consensus         1 ls~~eAa~lg~aGlTA~~al~~~~~~~~~~~~~~vlI~gasGgVG~~aiQlak~~G~~Vi~~t~s~~k~~~~-~~lGA   77 (77)
T d1o8ca2           1 LDARKAMIIGTAGFTAMLCVMALEDAGVRPQDGEIVVTGASGGVGSTAVALLHKLGYQVVAVSGRESTHEYL-KSLGA   77 (77)
T ss_dssp             CCHHHHHHHHHHHHHHHHHHHHHHHTTCCGGGCEEEESSTTSHHHHHHHHHHHHTTCCEEEEESCGGGHHHH-HHHTE
T ss_pred             CCHHHHHHhhhHHHHHHHHHHHHHhhhhccCCCcEEEEeCCCcHHHHHHHHHHHcCCeEEEEECCHHHHHHH-HHCCC
Confidence            578999999999999987764   4555689999999987 9999999999999999999999998887555 77874

>d1pjca1 c.2.1.4 (A:136-303) L-alanine dehydrogenase {Phormidium lapideum [TaxId: 32060]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Formate/glycerate dehydrogenases, NAD-domain
domain: L-alanine dehydrogenase
species: Phormidium lapideum [TaxId: 32060]

Probab=98.45  E-value=8e-07  Score=69.69  Aligned_cols=99  Identities=20%  Similarity=0.243  Sum_probs=79.8

Q ss_pred             CCCEEEEEcCChHHHHHHHHHHHcCCeEEEEeCCchhHHHHHHHcCCCEEecCCCHHHHHHhcCCccEEEEcCCC-----
Q 018067          183 PGMHVGVVGLGGLGHVAVKFAKAMGVKVTVISTSPSKKSEAIERLGADSFLVSRDQDEMQAAMGTMDGIIDTVSA-----  257 (361)
Q Consensus       183 ~g~~vlV~Gag~vG~~a~~la~~~g~~vi~~~~~~~~~~~~~~~~g~~~vv~~~~~~~~~~~~~g~d~vid~~g~-----  257 (361)
                      +..+|+|+|+|.+|+.+++.|+.+|++|.+++.+.++++++...++........+.+.+.+....+|+||.++=-     
T Consensus        31 ~pa~V~ViGaGvaG~~A~~~A~~lGA~V~~~D~~~~~l~~l~~~~~~~~~~~~~~~~~l~~~~~~aDivI~aalipG~~a  110 (168)
T d1pjca1          31 KPGKVVILGGGVVGTEAAKMAVGLGAQVQIFDINVERLSYLETLFGSRVELLYSNSAEIETAVAEADLLIGAVLVPGRRA  110 (168)
T ss_dssp             CCCEEEEECCSHHHHHHHHHHHHTTCEEEEEESCHHHHHHHHHHHGGGSEEEECCHHHHHHHHHTCSEEEECCCCTTSSC
T ss_pred             CCcEEEEECCChHHHHHHHHHhhCCCEEEEEeCcHHHHHHHHHhhcccceeehhhhhhHHHhhccCcEEEEeeecCCccc
Confidence            467899999999999999999999999999999999998887666654333455666666666789999998632     


Q ss_pred             c-ccHHHHHhccccCCEEEEecCCC
Q 018067          258 V-HPLMPLIGLLKSQGKLVLVGAPE  281 (361)
Q Consensus       258 ~-~~~~~~~~~l~~~G~~v~~g~~~  281 (361)
                      + ..-...++.|++|.-+|++....
T Consensus       111 P~lIt~~mv~~Mk~GSVIVDvaidq  135 (168)
T d1pjca1         111 PILVPASLVEQMRTGSVIVDVAVDQ  135 (168)
T ss_dssp             CCCBCHHHHTTSCTTCEEEETTCTT
T ss_pred             CeeecHHHHhhcCCCcEEEEeecCC
Confidence            1 12467999999999999998754

>d1luaa1 c.2.1.7 (A:98-288) Methylene-tetrahydromethanopterin dehydrogenase {Methylobacterium extorquens [TaxId: 408]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Aminoacid dehydrogenase-like, C-terminal domain
domain: Methylene-tetrahydromethanopterin dehydrogenase
species: Methylobacterium extorquens [TaxId: 408]

Probab=98.18  E-value=8.2e-06  Score=66.27  Aligned_cols=82  Identities=13%  Similarity=0.116  Sum_probs=66.6

Q ss_pred             hhcCCCCCCCEEEEEcC-ChHHHHHHHHHHHcCCeEEEEeCCchhHHHHHHHcC----C-CEEecCCCHHHHHHhcCCcc
Q 018067          176 RFYGLDKPGMHVGVVGL-GGLGHVAVKFAKAMGVKVTVISTSPSKKSEAIERLG----A-DSFLVSRDQDEMQAAMGTMD  249 (361)
Q Consensus       176 ~~~~~~~~g~~vlV~Ga-g~vG~~a~~la~~~g~~vi~~~~~~~~~~~~~~~~g----~-~~vv~~~~~~~~~~~~~g~d  249 (361)
                      +....--+|++++|+|+ |++|..+++.+...|++|++++++.++..++.+.+.    . ....|..+.+.+.+..+++|
T Consensus        15 ~~~~~~l~gK~vlItGasgGIG~~ia~~la~~G~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~d~~~~~~~~~~~~~iD   94 (191)
T d1luaa1          15 KAAGGSVKGKKAVVLAGTGPVGMRSAALLAGEGAEVVLCGRKLDKAQAAADSVNKRFKVNVTAAETADDASRAEAVKGAH   94 (191)
T ss_dssp             HHTTSCCTTCEEEEETTTSHHHHHHHHHHHHTTCEEEEEESSHHHHHHHHHHHHHHHTCCCEEEECCSHHHHHHHTTTCS
T ss_pred             HHcCCCCCCCEEEEECCCHHHHHHHHHHHHhhccchhhcccchHHHHHHHHHHHhccchhhhhhhcccHHHHHHHhcCcC
Confidence            33343458999999997 999999999999999999999999988777766553    2 34466777788888888999


Q ss_pred             EEEEcCCC
Q 018067          250 GIIDTVSA  257 (361)
Q Consensus       250 ~vid~~g~  257 (361)
                      ++|+++|.
T Consensus        95 ilin~Ag~  102 (191)
T d1luaa1          95 FVFTAGAI  102 (191)
T ss_dssp             EEEECCCT
T ss_pred             eeeecCcc
Confidence            99999874

>d1l7da1 c.2.1.4 (A:144-326) Nicotinamide nucleotide transhydrogenase dI component {Rhodospirillum rubrum [TaxId: 1085]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Formate/glycerate dehydrogenases, NAD-domain
domain: Nicotinamide nucleotide transhydrogenase dI component
species: Rhodospirillum rubrum [TaxId: 1085]

Probab=98.17  E-value=8.8e-06  Score=64.55  Aligned_cols=118  Identities=19%  Similarity=0.185  Sum_probs=80.0

Q ss_pred             CCCEEEEEcCChHHHHHHHHHHHcCCeEEEEeCCchhHHHHHHHcCCCEEec-CCC----------------------HH
Q 018067          183 PGMHVGVVGLGGLGHVAVKFAKAMGVKVTVISTSPSKKSEAIERLGADSFLV-SRD----------------------QD  239 (361)
Q Consensus       183 ~g~~vlV~Gag~vG~~a~~la~~~g~~vi~~~~~~~~~~~~~~~~g~~~vv~-~~~----------------------~~  239 (361)
                      ++.+|+|+|+|.+|+.|+..|+.+|++|.+++.+.++++++ ++++...+.. ...                      .+
T Consensus        28 ~pa~VvViGaGvaG~~Aa~~A~~lGA~V~v~D~~~~~~~~l-~~l~~~~i~~~~~~~~~~~~~~gyA~~~s~~~~~~~~~  106 (183)
T d1l7da1          28 PPARVLVFGVGVAGLQAIATAKRLGAVVMATDVRAATKEQV-ESLGGKFITVDDEAMKTAETAGGYAKEMGEEFRKKQAE  106 (183)
T ss_dssp             CCCEEEEECCSHHHHHHHHHHHHTTCEEEEECSCSTTHHHH-HHTTCEECCC-----------------------CCHHH
T ss_pred             CCcEEEEEcCcHHHHHHHHHHHHcCCEEEEEeccHHHHHHH-HHhhcceEEEeccccccccccccchhhcCHHHHHHHHH
Confidence            45789999999999999999999999999999999988888 6676543211 000                      12


Q ss_pred             HHHHhcCCccEEEEcCCC-----c-ccHHHHHhccccCCEEEEecCCCC-CcccChH--HHHhCCcEEEec
Q 018067          240 EMQAAMGTMDGIIDTVSA-----V-HPLMPLIGLLKSQGKLVLVGAPEK-PLELPAF--SLLMGRKIVGGS  301 (361)
Q Consensus       240 ~~~~~~~g~d~vid~~g~-----~-~~~~~~~~~l~~~G~~v~~g~~~~-~~~~~~~--~~~~~~~~i~g~  301 (361)
                      .+.+.....|+||-++=-     + ..-+..++.|++|+-+|++....+ .++.+..  .+..+++.+.+.
T Consensus       107 ~l~~~l~~aDlVI~talipG~~aP~lit~~mv~~Mk~GSVIVDvaidqGGn~Ets~~~~~~~~~gV~~~gv  177 (183)
T d1l7da1         107 AVLKELVKTDIAITTALIPGKPAPVLITEEMVTKMKPGSVIIDLAVEAGGNCPLSEPGKIVVKHGVKIVGH  177 (183)
T ss_dssp             HHHHHHTTCSEEEECCCCTTSCCCCCSCHHHHTTSCTTCEEEETTGGGTCSSTTCCTTCEEEETTEEEECC
T ss_pred             HHHHHHHhhhhheeeeecCCcccceeehHHHHHhcCCCcEEEEEeecCCCccccCcCCCEEEECCEEEEee
Confidence            222333479999987632     1 234689999999999999976432 3332221  123345555554

>d1q7ba_ c.2.1.2 (A:) beta-keto acyl carrier protein reductase {Escherichia coli [TaxId: 562]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Tyrosine-dependent oxidoreductases
domain: beta-keto acyl carrier protein reductase
species: Escherichia coli [TaxId: 562]

Probab=98.03  E-value=1.5e-05  Score=67.23  Aligned_cols=98  Identities=21%  Similarity=0.350  Sum_probs=74.2

Q ss_pred             CCCEEEEEcC-ChHHHHHHHHHHHcCCeEEEEeCCchhHHHHHHHcCCC---EEecCCCHHHHHHh-------cCCccEE
Q 018067          183 PGMHVGVVGL-GGLGHVAVKFAKAMGVKVTVISTSPSKKSEAIERLGAD---SFLVSRDQDEMQAA-------MGTMDGI  251 (361)
Q Consensus       183 ~g~~vlV~Ga-g~vG~~a~~la~~~g~~vi~~~~~~~~~~~~~~~~g~~---~vv~~~~~~~~~~~-------~~g~d~v  251 (361)
                      +|+++||.|+ +++|.+.++.+...|++|+++++++++.+++.++++.+   ...|-.+++.++++       .++.|++
T Consensus         3 ~gK~alITGas~GIG~a~a~~l~~~G~~Vv~~~r~~~~l~~~~~~~~~~~~~~~~Dv~~~~~v~~~~~~~~~~~g~iDil   82 (243)
T d1q7ba_           3 EGKIALVTGASRGIGRAIAETLAARGAKVIGTATSENGAQAISDYLGANGKGLMLNVTDPASIESVLEKIRAEFGEVDIL   82 (243)
T ss_dssp             TTCEEEESSCSSHHHHHHHHHHHHTTCEEEEEESSHHHHHHHHHHHGGGEEEEECCTTCHHHHHHHHHHHHHHTCSCSEE
T ss_pred             CCCEEEEeCCCCHHHHHHHHHHHHcCCEEEEEeCCHHHHHHHHHHhCCCCcEEEEEecCHHHhhhhhhhhhcccCCccee
Confidence            5889999987 99999999999999999999999999988888888753   23455565443332       2579999


Q ss_pred             EEcCCCcc-------------------------cHHHHHhcc--ccCCEEEEecCC
Q 018067          252 IDTVSAVH-------------------------PLMPLIGLL--KSQGKLVLVGAP  280 (361)
Q Consensus       252 id~~g~~~-------------------------~~~~~~~~l--~~~G~~v~~g~~  280 (361)
                      ++++|...                         ..+.++..+  +.+|+++.+++.
T Consensus        83 VnnAg~~~~~~~~~~~~~~~~~~~~vNl~~~~~~~~~~~~~m~~~~~G~II~isS~  138 (243)
T d1q7ba_          83 VNNAGITRDNLLMRMKDEEWNDIIETNLSSVFRLSKAVMRAMMKKRHGRIITIGSV  138 (243)
T ss_dssp             EECCCCCCCCCGGGCCHHHHHHHHHHHTHHHHHHHHHHHHHHHHHTCEEEEEECCH
T ss_pred             hhhhhhccccccccccccccccccceeechhhhhHHHHHHHHHHcCCCEeeeecch
Confidence            99988531                         334455565  357999999863

>d1hxha_ c.2.1.2 (A:) 3beta/17beta hydroxysteroid dehydrogenase {Comamonas testosteroni [TaxId: 285]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Tyrosine-dependent oxidoreductases
domain: 3beta/17beta hydroxysteroid dehydrogenase
species: Comamonas testosteroni [TaxId: 285]

Probab=97.99  E-value=2.6e-05  Score=66.12  Aligned_cols=100  Identities=18%  Similarity=0.264  Sum_probs=74.8

Q ss_pred             CCCCEEEEEcC-ChHHHHHHHHHHHcCCeEEEEeCCchhHHHHHHHcCCCEEe---cCCCHHHHHHh-------cCCccE
Q 018067          182 KPGMHVGVVGL-GGLGHVAVKFAKAMGVKVTVISTSPSKKSEAIERLGADSFL---VSRDQDEMQAA-------MGTMDG  250 (361)
Q Consensus       182 ~~g~~vlV~Ga-g~vG~~a~~la~~~g~~vi~~~~~~~~~~~~~~~~g~~~vv---~~~~~~~~~~~-------~~g~d~  250 (361)
                      -+|+++||.|+ +++|.++++.+...|++|+++++++++.+++.++++....+   |..+++.++++       .++.|+
T Consensus         4 L~gK~alITGas~GIG~aia~~la~~Ga~V~~~~~~~~~~~~~~~~~~~~~~~~~~Dv~~~~~~~~~~~~~~~~~g~iDi   83 (253)
T d1hxha_           4 LQGKVALVTGGASGVGLEVVKLLLGEGAKVAFSDINEAAGQQLAAELGERSMFVRHDVSSEADWTLVMAAVQRRLGTLNV   83 (253)
T ss_dssp             TTTCEEEETTTTSHHHHHHHHHHHHTTCEEEEECSCHHHHHHHHHHHCTTEEEECCCTTCHHHHHHHHHHHHHHHCSCCE
T ss_pred             CCCCEEEEeCCCCHHHHHHHHHHHHCCCEEEEEECCHHHHHHHHHHhCCCeEEEEeecCCHHHHHHHHHHHHHHhCCCCe
Confidence            36889999987 99999999999999999999999999988998998865433   33444333322       257999


Q ss_pred             EEEcCCCcc-------------------------cHHHHHhccc-cCCEEEEecCCC
Q 018067          251 IIDTVSAVH-------------------------PLMPLIGLLK-SQGKLVLVGAPE  281 (361)
Q Consensus       251 vid~~g~~~-------------------------~~~~~~~~l~-~~G~~v~~g~~~  281 (361)
                      +++++|...                         ..+.++..|+ .+|+++.+++..
T Consensus        84 lVnnAG~~~~~~~~~~~~~~~~~~~~vNl~~~~~~~~~~~~~m~~~~G~Iv~isS~~  140 (253)
T d1hxha_          84 LVNNAGILLPGDMETGRLEDFSRLLKINTESVFIGCQQGIAAMKETGGSIINMASVS  140 (253)
T ss_dssp             EEECCCCCCCBCTTTCCHHHHHHHHHHHTHHHHHHHHHHHHHHTTTCEEEEEECCGG
T ss_pred             EEecccccCCCCcccCCHHHHHHHHHHhhhHHHHHHHHHHHHHHhcCCceecccchh
Confidence            999998521                         2334555564 579999998643

>d1hdca_ c.2.1.2 (A:) 3-alpha,20-beta-hydroxysteroid dehydrogenase {Streptomyces hydrogenans [TaxId: 1905]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Tyrosine-dependent oxidoreductases
domain: 3-alpha,20-beta-hydroxysteroid dehydrogenase
species: Streptomyces hydrogenans [TaxId: 1905]

Probab=97.95  E-value=2.9e-05  Score=65.85  Aligned_cols=99  Identities=21%  Similarity=0.358  Sum_probs=74.1

Q ss_pred             CCCEEEEEcC-ChHHHHHHHHHHHcCCeEEEEeCCchhHHHHHHHcCCCE---EecCCCHHHHHHh-------cCCccEE
Q 018067          183 PGMHVGVVGL-GGLGHVAVKFAKAMGVKVTVISTSPSKKSEAIERLGADS---FLVSRDQDEMQAA-------MGTMDGI  251 (361)
Q Consensus       183 ~g~~vlV~Ga-g~vG~~a~~la~~~g~~vi~~~~~~~~~~~~~~~~g~~~---vv~~~~~~~~~~~-------~~g~d~v  251 (361)
                      +|+++||.|+ +++|.++++.+...|++|+++++++++..+++++++...   ..|-.+++.++++       .+++|++
T Consensus         4 ~gK~alVTGas~GIG~aia~~la~~Ga~V~~~~r~~~~~~~~~~~~~~~~~~~~~Dv~~~~~v~~~~~~~~~~~g~iDil   83 (254)
T d1hdca_           4 SGKTVIITGGARGLGAEAARQAVAAGARVVLADVLDEEGAATARELGDAARYQHLDVTIEEDWQRVVAYAREEFGSVDGL   83 (254)
T ss_dssp             CCSEEEEETTTSHHHHHHHHHHHHTTCEEEEEESCHHHHHHHHHTTGGGEEEEECCTTCHHHHHHHHHHHHHHHSCCCEE
T ss_pred             CCCEEEEeCcCCHHHHHHHHHHHHCCCEEEEEECCHHHHHHHHHHhCCceEEEEcccCCHHHHHHHHHHHHHHcCCccEE
Confidence            6899999997 999999999999999999999999999999988887542   3355555444332       2579999


Q ss_pred             EEcCCCcc-------------------------cHHHHHhcc--ccCCEEEEecCCC
Q 018067          252 IDTVSAVH-------------------------PLMPLIGLL--KSQGKLVLVGAPE  281 (361)
Q Consensus       252 id~~g~~~-------------------------~~~~~~~~l--~~~G~~v~~g~~~  281 (361)
                      |+++|...                         ..+.++..+  +.+|++|.+++..
T Consensus        84 VnnAg~~~~~~~~~~~~~~~~~~~~vN~~~~~~~~~~~~p~m~~~~~G~II~isS~~  140 (254)
T d1hdca_          84 VNNAGISTGMFLETESVERFRKVVEINLTGVFIGMKTVIPAMKDAGGGSIVNISSAA  140 (254)
T ss_dssp             EECCCCCCCSCGGGSCHHHHHHHHHHHTHHHHHHHHHHHHHHHHHTCEEEEEECCGG
T ss_pred             EecCccccccccccccccccchhhhHHhhHHHHHHHHHHHHHhhcCCCeecccccch
Confidence            99998521                         233344444  3479999998643

>d1nffa_ c.2.1.2 (A:) Putative oxidoreductase Rv2002 {Mycobacterium tuberculosis [TaxId: 1773]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Tyrosine-dependent oxidoreductases
domain: Putative oxidoreductase Rv2002
species: Mycobacterium tuberculosis [TaxId: 1773]

Probab=97.92  E-value=4.6e-05  Score=64.14  Aligned_cols=100  Identities=17%  Similarity=0.243  Sum_probs=74.4

Q ss_pred             CCCCEEEEEcC-ChHHHHHHHHHHHcCCeEEEEeCCchhHHHHHHHcCCCE---EecCCCHHHHHHh-------cCCccE
Q 018067          182 KPGMHVGVVGL-GGLGHVAVKFAKAMGVKVTVISTSPSKKSEAIERLGADS---FLVSRDQDEMQAA-------MGTMDG  250 (361)
Q Consensus       182 ~~g~~vlV~Ga-g~vG~~a~~la~~~g~~vi~~~~~~~~~~~~~~~~g~~~---vv~~~~~~~~~~~-------~~g~d~  250 (361)
                      -+|+++||.|+ +++|.++++.+...|++|+++++++++.+.+.++++...   ..|-.+++.++++       .+++|+
T Consensus         4 L~gK~alITGas~GIG~aia~~la~~G~~V~~~~r~~~~~~~~~~~~~~~~~~~~~Dv~~~~~v~~~~~~~~~~~g~idi   83 (244)
T d1nffa_           4 LTGKVALVSGGARGMGASHVRAMVAEGAKVVFGDILDEEGKAMAAELADAARYVHLDVTQPAQWKAAVDTAVTAFGGLHV   83 (244)
T ss_dssp             TTTCEEEEETTTSHHHHHHHHHHHHTTCEEEEEESCHHHHHHHHHHTGGGEEEEECCTTCHHHHHHHHHHHHHHHSCCCE
T ss_pred             cCCCEEEEeCCCCHHHHHHHHHHHHCCCEEEEEECCHHHHHHHHHHhhCcceEEEeecCCHHHHHHHHHHHHHHhCCCeE
Confidence            46899999997 999999999999999999999999999988888887532   2355565543332       257999


Q ss_pred             EEEcCCCcc-------------------------cHHHHHhcc--ccCCEEEEecCCC
Q 018067          251 IIDTVSAVH-------------------------PLMPLIGLL--KSQGKLVLVGAPE  281 (361)
Q Consensus       251 vid~~g~~~-------------------------~~~~~~~~l--~~~G~~v~~g~~~  281 (361)
                      +++++|...                         ..+.++..+  +.+|++|.+++..
T Consensus        84 linnAG~~~~~~~~~~~~~~~~~~~~vNl~~~~~~~~~~~~~m~~~~~G~Ii~isS~~  141 (244)
T d1nffa_          84 LVNNAGILNIGTIEDYALTEWQRILDVNLTGVFLGIRAVVKPMKEAGRGSIINISSIE  141 (244)
T ss_dssp             EEECCCCCCCBCTTTSCHHHHHHHHHHHTHHHHHHHHHHHHHHHHHTCEEEEEECCGG
T ss_pred             EEECCcccCCCchhhCCHHHHhHHhhcccchhhHHHHHHHhHHHhcCcceEEeccccc
Confidence            999998631                         222344444  3569999998753

>d1vl8a_ c.2.1.2 (A:) Gluconate 5-dehydrogenase {Thermotoga maritima [TaxId: 2336]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Tyrosine-dependent oxidoreductases
domain: Gluconate 5-dehydrogenase
species: Thermotoga maritima [TaxId: 2336]

Probab=97.87  E-value=0.00011  Score=61.98  Aligned_cols=97  Identities=22%  Similarity=0.305  Sum_probs=70.2

Q ss_pred             CCCEEEEEcC-ChHHHHHHHHHHHcCCeEEEEeCCchhHHHHH----HHcCCCE---EecCCCHHHHHHh-------cCC
Q 018067          183 PGMHVGVVGL-GGLGHVAVKFAKAMGVKVTVISTSPSKKSEAI----ERLGADS---FLVSRDQDEMQAA-------MGT  247 (361)
Q Consensus       183 ~g~~vlV~Ga-g~vG~~a~~la~~~g~~vi~~~~~~~~~~~~~----~~~g~~~---vv~~~~~~~~~~~-------~~g  247 (361)
                      +|+++||.|+ +++|.++++.+...|++|++++++.++..+..    ++.|.+.   ..|-.+++.++++       .++
T Consensus         4 ~gK~~lITGas~GIG~aia~~la~~Ga~V~i~~r~~~~~~~~~~~l~~~~g~~~~~~~~Dv~~~~~v~~~~~~~~~~~g~   83 (251)
T d1vl8a_           4 RGRVALVTGGSRGLGFGIAQGLAEAGCSVVVASRNLEEASEAAQKLTEKYGVETMAFRCDVSNYEEVKKLLEAVKEKFGK   83 (251)
T ss_dssp             TTCEEEEETTTSHHHHHHHHHHHHTTCEEEEEESCHHHHHHHHHHHHHHHCCCEEEEECCTTCHHHHHHHHHHHHHHHSC
T ss_pred             CCCEEEEeCCCCHHHHHHHHHHHHCCCEEEEEECCHHHHHHHHHHHHHHhCCcEEEEEccCCCHHHHHHHHHHHHHHcCC
Confidence            5889999997 99999999999999999999999987765544    3446542   2355565543332       257


Q ss_pred             ccEEEEcCCCcc-------------------------cHHHHHhccc--cCCEEEEecC
Q 018067          248 MDGIIDTVSAVH-------------------------PLMPLIGLLK--SQGKLVLVGA  279 (361)
Q Consensus       248 ~d~vid~~g~~~-------------------------~~~~~~~~l~--~~G~~v~~g~  279 (361)
                      +|++|+++|...                         ..+.++..|+  .+|+++.+++
T Consensus        84 iDiLVnnAG~~~~~~~~~~~~e~~~~~~~vNl~~~~~~~~~~~~~m~~~~~G~Ii~i~S  142 (251)
T d1vl8a_          84 LDTVVNAAGINRRHPAEEFPLDEFRQVIEVNLFGTYYVCREAFSLLRESDNPSIINIGS  142 (251)
T ss_dssp             CCEEEECCCCCCCCCGGGCCHHHHHHHHHHHTHHHHHHHHHHHHHHTTCSSCEEEEECC
T ss_pred             CCEEEECCCCCCCCChhhCCHHHHHHHHHhhhhhhhhhhhhhhhccccccccccccccc
Confidence            999999998521                         2334556663  4689999976

>d1pr9a_ c.2.1.2 (A:) Carbonyl reductase {Human (Homo sapiens) [TaxId: 9606]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Tyrosine-dependent oxidoreductases
domain: Carbonyl reductase
species: Human (Homo sapiens) [TaxId: 9606]

Probab=97.86  E-value=4.4e-05  Score=64.34  Aligned_cols=76  Identities=20%  Similarity=0.295  Sum_probs=63.1

Q ss_pred             CCCCEEEEEcC-ChHHHHHHHHHHHcCCeEEEEeCCchhHHHHHHHcCCC--EEecCCCHHHHHHhc---CCccEEEEcC
Q 018067          182 KPGMHVGVVGL-GGLGHVAVKFAKAMGVKVTVISTSPSKKSEAIERLGAD--SFLVSRDQDEMQAAM---GTMDGIIDTV  255 (361)
Q Consensus       182 ~~g~~vlV~Ga-g~vG~~a~~la~~~g~~vi~~~~~~~~~~~~~~~~g~~--~vv~~~~~~~~~~~~---~g~d~vid~~  255 (361)
                      -.|+++||.|+ +++|.++++.+...|++|+++++++++.+++.++++..  ...|-.+++.++++.   +++|++++++
T Consensus         5 L~GK~~lITGas~GIG~aia~~la~~G~~V~~~~r~~~~l~~~~~~~~~~~~~~~Dv~d~~~v~~~~~~~g~iDilVnnA   84 (244)
T d1pr9a_           5 LAGRRVLVTGAGKGIGRGTVQALHATGARVVAVSRTQADLDSLVRECPGIEPVCVDLGDWEATERALGSVGPVDLLVNNA   84 (244)
T ss_dssp             CTTCEEEEESTTSHHHHHHHHHHHHTTCEEEEEESCHHHHHHHHHHSTTCEEEECCTTCHHHHHHHHTTCCCCCEEEECC
T ss_pred             CCCCEEEEeCCCCHHHHHHHHHHHHcCCEEEEEECCHHHHHHHHHhcCCCeEEEEeCCCHHHHHHHHHHhCCceEEEecc
Confidence            37899999997 99999999999999999999999999988888887743  344666776666554   4799999999


Q ss_pred             CC
Q 018067          256 SA  257 (361)
Q Consensus       256 g~  257 (361)
                      |.
T Consensus        85 g~   86 (244)
T d1pr9a_          85 AV   86 (244)
T ss_dssp             CC
T ss_pred             cc
Confidence            85

>d2gdza1 c.2.1.2 (A:3-256) 15-hydroxyprostaglandin dehydrogenase, PGDH {Human (Homo sapiens) [TaxId: 9606]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Tyrosine-dependent oxidoreductases
domain: 15-hydroxyprostaglandin dehydrogenase, PGDH
species: Human (Homo sapiens) [TaxId: 9606]

Probab=97.83  E-value=0.00011  Score=62.13  Aligned_cols=98  Identities=14%  Similarity=0.188  Sum_probs=70.2

Q ss_pred             CCCEEEEEcC-ChHHHHHHHHHHHcCCeEEEEeCCchhHHHHHHHcC-----CC---EEecCCCHHHHHHh-------cC
Q 018067          183 PGMHVGVVGL-GGLGHVAVKFAKAMGVKVTVISTSPSKKSEAIERLG-----AD---SFLVSRDQDEMQAA-------MG  246 (361)
Q Consensus       183 ~g~~vlV~Ga-g~vG~~a~~la~~~g~~vi~~~~~~~~~~~~~~~~g-----~~---~vv~~~~~~~~~~~-------~~  246 (361)
                      .|+++||.|+ +++|.++++.+...|++|++++++.++..++.+++.     ..   ...|-.+++.++++       .+
T Consensus         2 ~GKvalITGas~GIG~aia~~la~~Ga~V~i~~r~~~~~~~~~~~l~~~~~~~~~~~~~~Dv~~~~~v~~~~~~~~~~~G   81 (254)
T d2gdza1           2 NGKVALVTGAAQGIGRAFAEALLLKGAKVALVDWNLEAGVQCKAALHEQFEPQKTLFIQCDVADQQQLRDTFRKVVDHFG   81 (254)
T ss_dssp             TTCEEEEETTTSHHHHHHHHHHHHTTCEEEEEESCHHHHHHHHHHHTTTSCGGGEEEEECCTTSHHHHHHHHHHHHHHHS
T ss_pred             CCCEEEEeCCCCHHHHHHHHHHHHCCCEEEEEECCHHHHHHHHHHHHHhcCCCcEEEEEeecCCHHHHHHHHHHHHHHcC
Confidence            5899999997 999999999999999999999999988777766552     12   12355565444332       25


Q ss_pred             CccEEEEcCCCcc-----------------cHHHHHhccc-----cCCEEEEecCC
Q 018067          247 TMDGIIDTVSAVH-----------------PLMPLIGLLK-----SQGKLVLVGAP  280 (361)
Q Consensus       247 g~d~vid~~g~~~-----------------~~~~~~~~l~-----~~G~~v~~g~~  280 (361)
                      ++|++++++|...                 ....++..++     .+|+++.+++.
T Consensus        82 ~iDilVnnAg~~~~~~~~~~~~~n~~~~~~~~~~~~~~m~~~~~~~~g~Iv~isS~  137 (254)
T d2gdza1          82 RLDILVNNAGVNNEKNWEKTLQINLVSVISGTYLGLDYMSKQNGGEGGIIINMSSL  137 (254)
T ss_dssp             CCCEEEECCCCCCSSSHHHHHHHHTHHHHHHHHHHHHHHCGGGTCCCEEEEEECCG
T ss_pred             CcCeecccccccccccchheeeeehhhHHHHHHHHHHHHHHhhcCCCcEEEeeccH
Confidence            7999999998632                 2233444443     25889999864

>d1gpja2 c.2.1.7 (A:144-302) Glutamyl tRNA-reductase middle domain {Archaeon Methanopyrus kandleri [TaxId: 2320]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Aminoacid dehydrogenase-like, C-terminal domain
domain: Glutamyl tRNA-reductase middle domain
species: Archaeon Methanopyrus kandleri [TaxId: 2320]

Probab=97.81  E-value=5.6e-05  Score=59.12  Aligned_cols=74  Identities=24%  Similarity=0.308  Sum_probs=59.7

Q ss_pred             CCCCEEEEEcCChHHHHHHHHHHHcCC-eEEEEeCCchhHHHHHHHcCCCEEecCCCHHHHHHhcCCccEEEEcCCCcc
Q 018067          182 KPGMHVGVVGLGGLGHVAVKFAKAMGV-KVTVISTSPSKKSEAIERLGADSFLVSRDQDEMQAAMGTMDGIIDTVSAVH  259 (361)
Q Consensus       182 ~~g~~vlV~Gag~vG~~a~~la~~~g~-~vi~~~~~~~~~~~~~~~~g~~~vv~~~~~~~~~~~~~g~d~vid~~g~~~  259 (361)
                      -.+.+|||+|+|.+|.++++.+...|+ +++++.++.++-..+++++|... ++..   .+......+|+||.|++.+.
T Consensus        22 l~~~~ilviGaG~~g~~v~~~L~~~g~~~i~v~nRt~~ka~~l~~~~~~~~-~~~~---~~~~~l~~~Divi~atss~~   96 (159)
T d1gpja2          22 LHDKTVLVVGAGEMGKTVAKSLVDRGVRAVLVANRTYERAVELARDLGGEA-VRFD---ELVDHLARSDVVVSATAAPH   96 (159)
T ss_dssp             CTTCEEEEESCCHHHHHHHHHHHHHCCSEEEEECSSHHHHHHHHHHHTCEE-CCGG---GHHHHHHTCSEEEECCSSSS
T ss_pred             cccCeEEEECCCHHHHHHHHHHHhcCCcEEEEEcCcHHHHHHHHHhhhccc-ccch---hHHHHhccCCEEEEecCCCC
Confidence            578899999999999999999999998 68889999888888889998643 3333   23334457999999999764

>d2d1ya1 c.2.1.2 (A:2-249) Hypothetical protein TTHA0369 {Thermus thermophilus [TaxId: 274]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Tyrosine-dependent oxidoreductases
domain: Hypothetical protein TTHA0369
species: Thermus thermophilus [TaxId: 274]

Probab=97.81  E-value=0.0001  Score=62.13  Aligned_cols=99  Identities=20%  Similarity=0.237  Sum_probs=71.9

Q ss_pred             CCCCEEEEEcC-ChHHHHHHHHHHHcCCeEEEEeCCchhHHHHHHHcCCCE-EecCCCHHHHHHh-------cCCccEEE
Q 018067          182 KPGMHVGVVGL-GGLGHVAVKFAKAMGVKVTVISTSPSKKSEAIERLGADS-FLVSRDQDEMQAA-------MGTMDGII  252 (361)
Q Consensus       182 ~~g~~vlV~Ga-g~vG~~a~~la~~~g~~vi~~~~~~~~~~~~~~~~g~~~-vv~~~~~~~~~~~-------~~g~d~vi  252 (361)
                      -+|+++||.|+ +++|.++++.+...|++|++.+++++.. +++++.+... ..|-.+++.++++       .++.|++|
T Consensus         3 l~GK~alITGas~GIG~aia~~la~~G~~V~~~~~~~~~~-~~~~~~~~~~~~~Dv~~~~~v~~~~~~~~~~~G~iDiLV   81 (248)
T d2d1ya1           3 FAGKGVLVTGGARGIGRAIAQAFAREGALVALCDLRPEGK-EVAEAIGGAFFQVDLEDERERVRFVEEAAYALGRVDVLV   81 (248)
T ss_dssp             TTTCEEEEETTTSHHHHHHHHHHHHTTCEEEEEESSTTHH-HHHHHHTCEEEECCTTCHHHHHHHHHHHHHHHSCCCEEE
T ss_pred             cCCCEEEEeCCCCHHHHHHHHHHHHCCCEEEEEECCHHHH-HHHHHcCCeEEEEeCCCHHHHHHHHHHHHHhcCCCCeEE
Confidence            47899999997 9999999999999999999999987764 5557777643 3455565443332       25799999


Q ss_pred             EcCCCcc-------------------------cHHHHHhccc--cCCEEEEecCCC
Q 018067          253 DTVSAVH-------------------------PLMPLIGLLK--SQGKLVLVGAPE  281 (361)
Q Consensus       253 d~~g~~~-------------------------~~~~~~~~l~--~~G~~v~~g~~~  281 (361)
                      +++|...                         ..+.++..|+  .+|++|.++...
T Consensus        82 nnAG~~~~~~~~~~~~e~~~~~~~vNl~g~~~~~~~~~p~m~~~~~G~Ii~isS~~  137 (248)
T d2d1ya1          82 NNAAIAAPGSALTVRLPEWRRVLEVNLTAPMHLSALAAREMRKVGGGAIVNVASVQ  137 (248)
T ss_dssp             ECCCCCCCBCTTTCCHHHHHHHHHHHTHHHHHHHHHHHHHHHTTTCEEEEEECCGG
T ss_pred             EeCcCCCCCChhhCCHHHHHHHHHhhhhhHhhhhhhhccccccccccccccccccc
Confidence            9998521                         2334555664  368999998643

>d1ulsa_ c.2.1.2 (A:) beta-keto acyl carrier protein reductase {Thermus thermophilus [TaxId: 274]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Tyrosine-dependent oxidoreductases
domain: beta-keto acyl carrier protein reductase
species: Thermus thermophilus [TaxId: 274]

Probab=97.81  E-value=5.1e-05  Score=63.82  Aligned_cols=75  Identities=19%  Similarity=0.363  Sum_probs=61.2

Q ss_pred             CCCEEEEEcC-ChHHHHHHHHHHHcCCeEEEEeCCchhHHHHHHHcCCCE-EecCCCHHHHHHh-------cCCccEEEE
Q 018067          183 PGMHVGVVGL-GGLGHVAVKFAKAMGVKVTVISTSPSKKSEAIERLGADS-FLVSRDQDEMQAA-------MGTMDGIID  253 (361)
Q Consensus       183 ~g~~vlV~Ga-g~vG~~a~~la~~~g~~vi~~~~~~~~~~~~~~~~g~~~-vv~~~~~~~~~~~-------~~g~d~vid  253 (361)
                      +|+++||.|+ +++|.++++.+...|++|+++++++++.+++.+++++.. ..|-.+++.++++       .+++|++|+
T Consensus         4 ~gK~~lITGas~GIG~aia~~l~~~G~~V~~~~r~~~~l~~~~~~~~~~~~~~Dv~~~~~v~~~~~~~~~~~g~iDilVn   83 (242)
T d1ulsa_           4 KDKAVLITGAAHGIGRATLELFAKEGARLVACDIEEGPLREAAEAVGAHPVVMDVADPASVERGFAEALAHLGRLDGVVH   83 (242)
T ss_dssp             TTCEEEEESTTSHHHHHHHHHHHHTTCEEEEEESCHHHHHHHHHTTTCEEEECCTTCHHHHHHHHHHHHHHHSSCCEEEE
T ss_pred             CCCEEEEeCCCCHHHHHHHHHHHHCCCEEEEEECCHHHHHHHHHHcCCeEEEEecCCHHHHHHHHHHHHHhcCCceEEEE
Confidence            5789999997 999999999999999999999999999888888888753 3455665544432       257999999


Q ss_pred             cCCC
Q 018067          254 TVSA  257 (361)
Q Consensus       254 ~~g~  257 (361)
                      ++|.
T Consensus        84 nAG~   87 (242)
T d1ulsa_          84 YAGI   87 (242)
T ss_dssp             CCCC
T ss_pred             CCcc
Confidence            9985

>d1cyda_ c.2.1.2 (A:) Carbonyl reductase {Mouse (Mus musculus) [TaxId: 10090]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Tyrosine-dependent oxidoreductases
domain: Carbonyl reductase
species: Mouse (Mus musculus) [TaxId: 10090]

Probab=97.81  E-value=6e-05  Score=63.39  Aligned_cols=75  Identities=23%  Similarity=0.304  Sum_probs=61.9

Q ss_pred             CCCEEEEEcC-ChHHHHHHHHHHHcCCeEEEEeCCchhHHHHHHHcCCC--EEecCCCHHHHHHhc---CCccEEEEcCC
Q 018067          183 PGMHVGVVGL-GGLGHVAVKFAKAMGVKVTVISTSPSKKSEAIERLGAD--SFLVSRDQDEMQAAM---GTMDGIIDTVS  256 (361)
Q Consensus       183 ~g~~vlV~Ga-g~vG~~a~~la~~~g~~vi~~~~~~~~~~~~~~~~g~~--~vv~~~~~~~~~~~~---~g~d~vid~~g  256 (361)
                      .|+++||.|+ +++|.++++.+...|++|+++++++++..++.++++..  ...|-.+++.+++..   ++.|++++++|
T Consensus         4 ~GK~alITGas~GIG~aia~~la~~Ga~V~~~~r~~~~l~~~~~~~~~~~~~~~Dv~~~~~v~~~~~~~g~iDilVnnAg   83 (242)
T d1cyda_           4 SGLRALVTGAGKGIGRDTVKALHASGAKVVAVTRTNSDLVSLAKECPGIEPVCVDLGDWDATEKALGGIGPVDLLVNNAA   83 (242)
T ss_dssp             TTCEEEEESTTSHHHHHHHHHHHHTTCEEEEEESCHHHHHHHHHHSTTCEEEECCTTCHHHHHHHHTTCCCCSEEEECCC
T ss_pred             CCCEEEEeCCCcHHHHHHHHHHHHCCCEEEEEECCHHHHHHHHHhcCCCeEEEEeCCCHHHHHHHHHHcCCCeEEEECCc
Confidence            6899999997 99999999999999999999999999888888887642  234666676666554   47999999998


Q ss_pred             C
Q 018067          257 A  257 (361)
Q Consensus       257 ~  257 (361)
                      .
T Consensus        84 ~   84 (242)
T d1cyda_          84 L   84 (242)
T ss_dssp             C
T ss_pred             c
Confidence            5

>d1zema1 c.2.1.2 (A:3-262) Xylitol dehydrogenase {Gluconobacter oxydans [TaxId: 442]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Tyrosine-dependent oxidoreductases
domain: Xylitol dehydrogenase
species: Gluconobacter oxydans [TaxId: 442]

Probab=97.78  E-value=0.0001  Score=62.67  Aligned_cols=98  Identities=13%  Similarity=0.221  Sum_probs=70.4

Q ss_pred             CCCEEEEEcC-ChHHHHHHHHHHHcCCeEEEEeCCchhHHHHHHHc---CCCE---EecCCCHHHHHHh-------cCCc
Q 018067          183 PGMHVGVVGL-GGLGHVAVKFAKAMGVKVTVISTSPSKKSEAIERL---GADS---FLVSRDQDEMQAA-------MGTM  248 (361)
Q Consensus       183 ~g~~vlV~Ga-g~vG~~a~~la~~~g~~vi~~~~~~~~~~~~~~~~---g~~~---vv~~~~~~~~~~~-------~~g~  248 (361)
                      +|+++||.|+ +++|.+++..+-..|++|+++++++++.+++.+++   |.+.   ..|-.+++.++++       .+++
T Consensus         4 ~gK~alITGas~GIG~aia~~la~~Ga~V~~~~r~~~~l~~~~~~~~~~g~~~~~~~~Dv~~~~~v~~~~~~~~~~~g~i   83 (260)
T d1zema1           4 NGKVCLVTGAGGNIGLATALRLAEEGTAIALLDMNREALEKAEASVREKGVEARSYVCDVTSEEAVIGTVDSVVRDFGKI   83 (260)
T ss_dssp             TTCEEEEETTTSHHHHHHHHHHHHTTCEEEEEESCHHHHHHHHHHHHTTTSCEEEEECCTTCHHHHHHHHHHHHHHHSCC
T ss_pred             CCCEEEEeCCCCHHHHHHHHHHHHCCCEEEEEECCHHHHHHHHHHHHhcCCcEEEEEccCCCHHHHHHHHHHHHHHhCCC
Confidence            6899999997 99999999999999999999999988777665544   4332   2345555443332       2579


Q ss_pred             cEEEEcCCCcc--------------------------cHHHHHhcc--ccCCEEEEecCC
Q 018067          249 DGIIDTVSAVH--------------------------PLMPLIGLL--KSQGKLVLVGAP  280 (361)
Q Consensus       249 d~vid~~g~~~--------------------------~~~~~~~~l--~~~G~~v~~g~~  280 (361)
                      |++++++|...                          ..+.++..+  +.+|++|.+++.
T Consensus        84 DilVnnaG~~~~~~~~~~~~~~~~~~~~~vnl~~~~~~~~~~~~~m~~~~~G~II~isS~  143 (260)
T d1zema1          84 DFLFNNAGYQGAFAPVQDYPSDDFARVLTINVTGAFHVLKAVSRQMITQNYGRIVNTASM  143 (260)
T ss_dssp             CEEEECCCCCCCCBCGGGCCHHHHHHHHHHHTHHHHHHHHHHHHHHHHHTCEEEEEECCH
T ss_pred             CeehhhhccccccCccccccHHHHHhhccccccccccchhhHHhhhhhhcCCCCCeeech
Confidence            99999988421                          233344444  567999999863

>d1yb1a_ c.2.1.2 (A:) 17-beta-hydroxysteroid dehydrogenase type XI {Human (Homo sapiens) [TaxId: 9606]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Tyrosine-dependent oxidoreductases
domain: 17-beta-hydroxysteroid dehydrogenase type XI
species: Human (Homo sapiens) [TaxId: 9606]

Probab=97.78  E-value=0.00011  Score=61.66  Aligned_cols=100  Identities=14%  Similarity=0.270  Sum_probs=71.8

Q ss_pred             CCCEEEEEcC-ChHHHHHHHHHHHcCCeEEEEeCCchhHHHHHHHc---CCC---EEecCCCHHHHHH-------hcCCc
Q 018067          183 PGMHVGVVGL-GGLGHVAVKFAKAMGVKVTVISTSPSKKSEAIERL---GAD---SFLVSRDQDEMQA-------AMGTM  248 (361)
Q Consensus       183 ~g~~vlV~Ga-g~vG~~a~~la~~~g~~vi~~~~~~~~~~~~~~~~---g~~---~vv~~~~~~~~~~-------~~~g~  248 (361)
                      .|+++||.|+ +++|...+..+...|++|++++++.++.+++.+++   |.+   ...|..+++.+..       ..+.+
T Consensus         6 ~Gkv~lITGas~GIG~~ia~~la~~G~~V~l~~r~~~~l~~~~~~~~~~~~~~~~~~~Dvs~~~~v~~~~~~i~~~~g~i   85 (244)
T d1yb1a_           6 TGEIVLITGAGHGIGRLTAYEFAKLKSKLVLWDINKHGLEETAAKCKGLGAKVHTFVVDCSNREDIYSSAKKVKAEIGDV   85 (244)
T ss_dssp             TTCEEEEETTTSHHHHHHHHHHHHTTCEEEEEESCHHHHHHHHHHHHHTTCCEEEEECCTTCHHHHHHHHHHHHHHTCCC
T ss_pred             CCCEEEEeCCCcHHHHHHHHHHHHCCCEEEEEECCHHHHHHHHHHHHhcCCcEEEEEeeCCCHHHHHHHHHHHHHHcCCC
Confidence            6899999997 99999999999999999999999998877665543   433   2345566544333       23579


Q ss_pred             cEEEEcCCCcc-------------------------cHHHHHhccc--cCCEEEEecCCCC
Q 018067          249 DGIIDTVSAVH-------------------------PLMPLIGLLK--SQGKLVLVGAPEK  282 (361)
Q Consensus       249 d~vid~~g~~~-------------------------~~~~~~~~l~--~~G~~v~~g~~~~  282 (361)
                      |++++++|...                         ..+.++..++  ..|+++.+++...
T Consensus        86 dilinnag~~~~~~~~~~~~~~~~~~~~vN~~g~~~l~~~~lp~m~~~~~G~Iv~isS~~~  146 (244)
T d1yb1a_          86 SILVNNAGVVYTSDLFATQDPQIEKTFEVNVLAHFWTTKAFLPAMTKNNHGHIVTVASAAG  146 (244)
T ss_dssp             SEEEECCCCCCCCCCGGGHHHHHHHHHHHHTHHHHHHHHHHHHHHHHTTCEEEEEECCCC-
T ss_pred             ceeEeeccccccccccccchhHHHhhcceeeeccHHHHHHHhhhHHhcCCceEEEeecchh
Confidence            99999998631                         2333555553  3589999987654

>d1zk4a1 c.2.1.2 (A:1-251) R-specific alcohol dehydrogenase {Lactobacillus brevis [TaxId: 1580]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Tyrosine-dependent oxidoreductases
domain: R-specific alcohol dehydrogenase
species: Lactobacillus brevis [TaxId: 1580]

Probab=97.77  E-value=0.0001  Score=62.22  Aligned_cols=75  Identities=17%  Similarity=0.213  Sum_probs=58.6

Q ss_pred             CCCEEEEEcC-ChHHHHHHHHHHHcCCeEEEEeCCchhHHHHHHHcCC--C---EEecCCCHHHHHHh-------cCCcc
Q 018067          183 PGMHVGVVGL-GGLGHVAVKFAKAMGVKVTVISTSPSKKSEAIERLGA--D---SFLVSRDQDEMQAA-------MGTMD  249 (361)
Q Consensus       183 ~g~~vlV~Ga-g~vG~~a~~la~~~g~~vi~~~~~~~~~~~~~~~~g~--~---~vv~~~~~~~~~~~-------~~g~d  249 (361)
                      +|+++||.|+ +++|.++++.+...|++|++++++.++.+.+.++++.  .   ...|-.+++.+.++       .+++|
T Consensus         5 ~gK~alVTGas~GIG~aia~~la~~Ga~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~Dv~~~~~v~~~~~~~~~~~G~iD   84 (251)
T d1zk4a1           5 DGKVAIITGGTLGIGLAIATKFVEEGAKVMITGRHSDVGEKAAKSVGTPDQIQFFQHDSSDEDGWTKLFDATEKAFGPVS   84 (251)
T ss_dssp             TTCEEEETTTTSHHHHHHHHHHHHTTCEEEEEESCHHHHHHHHHHHCCTTTEEEEECCTTCHHHHHHHHHHHHHHHSSCC
T ss_pred             CCCEEEEeCCCCHHHHHHHHHHHHCCCEEEEEECCHHHHHHHHHHhCCCCcEEEEEccCCCHHHHHHHHHHHHHHhCCce
Confidence            6899999987 9999999999999999999999999888888777753  1   12355555433332       25899


Q ss_pred             EEEEcCCC
Q 018067          250 GIIDTVSA  257 (361)
Q Consensus       250 ~vid~~g~  257 (361)
                      ++++++|.
T Consensus        85 iLVnnAg~   92 (251)
T d1zk4a1          85 TLVNNAGI   92 (251)
T ss_dssp             EEEECCCC
T ss_pred             EEEecccc
Confidence            99999985

>d1k2wa_ c.2.1.2 (A:) Sorbitol dehydrogenase {Rhodobacter sphaeroides [TaxId: 1063]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Tyrosine-dependent oxidoreductases
domain: Sorbitol dehydrogenase
species: Rhodobacter sphaeroides [TaxId: 1063]

Probab=97.74  E-value=6.7e-05  Score=63.65  Aligned_cols=75  Identities=16%  Similarity=0.286  Sum_probs=61.4

Q ss_pred             CCCEEEEEcC-ChHHHHHHHHHHHcCCeEEEEeCCchhHHHHHHHcCCCE---EecCCCHHHHHHh-------cCCccEE
Q 018067          183 PGMHVGVVGL-GGLGHVAVKFAKAMGVKVTVISTSPSKKSEAIERLGADS---FLVSRDQDEMQAA-------MGTMDGI  251 (361)
Q Consensus       183 ~g~~vlV~Ga-g~vG~~a~~la~~~g~~vi~~~~~~~~~~~~~~~~g~~~---vv~~~~~~~~~~~-------~~g~d~v  251 (361)
                      +|+++||.|+ +++|.++++.+...|++|++++++.++.+++.+++|.+.   ..|-.+++.++++       .+++|++
T Consensus         4 ~gK~alVTGas~GIG~aia~~la~~Ga~V~~~~r~~~~l~~~~~~~~~~~~~~~~Dvt~~~~v~~~~~~~~~~~g~iDil   83 (256)
T d1k2wa_           4 DGKTALITGSARGIGRAFAEAYVREGARVAIADINLEAARATAAEIGPAACAIALDVTDQASIDRCVAELLDRWGSIDIL   83 (256)
T ss_dssp             TTEEEEEETCSSHHHHHHHHHHHHTTEEEEEEESCHHHHHHHHHHHCTTEEEEECCTTCHHHHHHHHHHHHHHHSCCCEE
T ss_pred             CCCEEEEeCCCCHHHHHHHHHHHHCCCEEEEEECCHHHHHHHHHHhCCceEEEEeeCCCHHHHHHHHHHHHHHhCCccEE
Confidence            5889999997 999999999999999999999999999999999998653   3355565544433       2589999


Q ss_pred             EEcCCC
Q 018067          252 IDTVSA  257 (361)
Q Consensus       252 id~~g~  257 (361)
                      ++++|.
T Consensus        84 VnnAg~   89 (256)
T d1k2wa_          84 VNNAAL   89 (256)
T ss_dssp             EECCCC
T ss_pred             Eeeccc
Confidence            999985

>d1xg5a_ c.2.1.2 (A:) Putative dehydrogenase ARPG836 (MGC4172) {Human (Homo sapiens) [TaxId: 9606]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Tyrosine-dependent oxidoreductases
domain: Putative dehydrogenase ARPG836 (MGC4172)
species: Human (Homo sapiens) [TaxId: 9606]

Probab=97.71  E-value=0.00017  Score=61.02  Aligned_cols=75  Identities=16%  Similarity=0.167  Sum_probs=57.1

Q ss_pred             CCCEEEEEcC-ChHHHHHHHHHHHcCCeEEEEeCCchhHHHHHHHc---CC--CE---EecCCCHHHHHHh-------cC
Q 018067          183 PGMHVGVVGL-GGLGHVAVKFAKAMGVKVTVISTSPSKKSEAIERL---GA--DS---FLVSRDQDEMQAA-------MG  246 (361)
Q Consensus       183 ~g~~vlV~Ga-g~vG~~a~~la~~~g~~vi~~~~~~~~~~~~~~~~---g~--~~---vv~~~~~~~~~~~-------~~  246 (361)
                      +|+++||.|+ ++||.+++..+...|++|++++++.++.+++++++   +.  ..   ..|-.+++.++++       .+
T Consensus         9 k~Kv~lITGas~GIG~aiA~~la~~G~~Vv~~~r~~~~l~~~~~~l~~~~~~~~~~~~~~Dls~~~~v~~~v~~~~~~~g   88 (257)
T d1xg5a_           9 RDRLALVTGASGGIGAAVARALVQQGLKVVGCARTVGNIEELAAECKSAGYPGTLIPYRCDLSNEEDILSMFSAIRSQHS   88 (257)
T ss_dssp             TTCEEEEESTTSHHHHHHHHHHHHTTCEEEEEESCHHHHHHHHHHHHHTTCSSEEEEEECCTTCHHHHHHHHHHHHHHHC
T ss_pred             CCCEEEEeCCCCHHHHHHHHHHHHCCCEEEEEECCHHHHHHHHHHHHhcCCCceEEEEEccCCCHHHHHHHHHHHHHhcC
Confidence            5789999997 99999999999999999999999988877775554   22  21   2355665543332       35


Q ss_pred             CccEEEEcCCC
Q 018067          247 TMDGIIDTVSA  257 (361)
Q Consensus       247 g~d~vid~~g~  257 (361)
                      ++|++|+++|.
T Consensus        89 ~iD~lVnnAg~   99 (257)
T d1xg5a_          89 GVDICINNAGL   99 (257)
T ss_dssp             CCSEEEECCCC
T ss_pred             CCCEEEecccc
Confidence            79999999986

>d2a4ka1 c.2.1.2 (A:2-242) beta-keto acyl carrier protein reductase {Thermus thermophilus, TTHB020 [TaxId: 274]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Tyrosine-dependent oxidoreductases
domain: beta-keto acyl carrier protein reductase
species: Thermus thermophilus, TTHB020 [TaxId: 274]

Probab=97.71  E-value=0.00025  Score=59.38  Aligned_cols=99  Identities=22%  Similarity=0.357  Sum_probs=75.3

Q ss_pred             CCCCEEEEEcC-ChHHHHHHHHHHHcCCeEEEEeCCchhHHHHHHHcCCCEE---ecCCCHHHHHHh-------cCCccE
Q 018067          182 KPGMHVGVVGL-GGLGHVAVKFAKAMGVKVTVISTSPSKKSEAIERLGADSF---LVSRDQDEMQAA-------MGTMDG  250 (361)
Q Consensus       182 ~~g~~vlV~Ga-g~vG~~a~~la~~~g~~vi~~~~~~~~~~~~~~~~g~~~v---v~~~~~~~~~~~-------~~g~d~  250 (361)
                      -.|+++||.|+ +++|.++++-+...|++|+++.++.++..+..++++.+..   .|-++++.++++       .+++|+
T Consensus         3 l~gK~alItGas~GIG~aia~~l~~~G~~V~~~~r~~~~~~~~~~~~~~~~~~~~~Dls~~~~i~~~~~~i~~~~g~iDi   82 (241)
T d2a4ka1           3 LSGKTILVTGAASGIGRAALDLFAREGASLVAVDREERLLAEAVAALEAEAIAVVADVSDPKAVEAVFAEALEEFGRLHG   82 (241)
T ss_dssp             TTTCEEEEESTTSHHHHHHHHHHHHTTCEEEEEESCHHHHHHHHHTCCSSEEEEECCTTSHHHHHHHHHHHHHHHSCCCE
T ss_pred             CCCCEEEEeCCCCHHHHHHHHHHHHCCCEEEEEECCHHHHHHHHHHcCCceEEEEecCCCHHHHHHHHHHHHHHhCCccE
Confidence            46899999997 9999999999999999999999999999999899886532   355555544332       257999


Q ss_pred             EEEcCCCcc-------------------------cHHHHHhccccCCEEEEecCC
Q 018067          251 IIDTVSAVH-------------------------PLMPLIGLLKSQGKLVLVGAP  280 (361)
Q Consensus       251 vid~~g~~~-------------------------~~~~~~~~l~~~G~~v~~g~~  280 (361)
                      .|+++|...                         ..+..+..++.++.++.++..
T Consensus        83 LinnAg~~~~~~~~~~~~~~~~~~~~~n~~~~~~~~k~~~~~~~~~~~i~~~ss~  137 (241)
T d2a4ka1          83 VAHFAGVAHSALSWNLPLEAWEKVLRVNLTGSFLVARKAGEVLEEGGSLVLTGSV  137 (241)
T ss_dssp             EEEGGGGTTTTC----CHHHHHHHHHHHHHHHHHHHHHHHHHCCTTCEEEEECCC
T ss_pred             eccccccccccchhhhhccccccccccccccccccccccccccccccceeecccc
Confidence            999987421                         233455677778888777654

>d2c07a1 c.2.1.2 (A:54-304) beta-keto acyl carrier protein reductase {Malaria parasite (Plasmodium falciparum) [TaxId: 5833]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Tyrosine-dependent oxidoreductases
domain: beta-keto acyl carrier protein reductase
species: Malaria parasite (Plasmodium falciparum) [TaxId: 5833]

Probab=97.67  E-value=0.00012  Score=61.70  Aligned_cols=98  Identities=14%  Similarity=0.218  Sum_probs=70.0

Q ss_pred             CCCEEEEEcC-ChHHHHHHHHHHHcCCeEEEEeCCchhHHHHHHHc---CCCE---EecCCCHHHHHHh-------cCCc
Q 018067          183 PGMHVGVVGL-GGLGHVAVKFAKAMGVKVTVISTSPSKKSEAIERL---GADS---FLVSRDQDEMQAA-------MGTM  248 (361)
Q Consensus       183 ~g~~vlV~Ga-g~vG~~a~~la~~~g~~vi~~~~~~~~~~~~~~~~---g~~~---vv~~~~~~~~~~~-------~~g~  248 (361)
                      +++.+||.|+ +++|.+++..+...|++|+++++++++.+++.+++   |.+.   ..|-.+++.+.++       .+++
T Consensus         9 enKvalITGas~GIG~a~a~~la~~Ga~V~~~~r~~~~l~~~~~~l~~~g~~~~~~~~Dvt~~~~v~~~~~~~~~~~g~i   88 (251)
T d2c07a1           9 ENKVALVTGAGRGIGREIAKMLAKSVSHVICISRTQKSCDSVVDEIKSFGYESSGYAGDVSKKEEISEVINKILTEHKNV   88 (251)
T ss_dssp             SSCEEEEESTTSHHHHHHHHHHTTTSSEEEEEESSHHHHHHHHHHHHTTTCCEEEEECCTTCHHHHHHHHHHHHHHCSCC
T ss_pred             CCCEEEEeCCCCHHHHHHHHHHHHcCCEEEEEECCHHHHHHHHHHHHhcCCcEEEEEccCCCHHHHHHHHHHHHHhcCCc
Confidence            5788999997 99999999999999999999999988776665544   4332   3355555444332       2589


Q ss_pred             cEEEEcCCCcc-------------------------cHHHHHhcc--ccCCEEEEecCC
Q 018067          249 DGIIDTVSAVH-------------------------PLMPLIGLL--KSQGKLVLVGAP  280 (361)
Q Consensus       249 d~vid~~g~~~-------------------------~~~~~~~~l--~~~G~~v~~g~~  280 (361)
                      |++++++|...                         ..+.++..+  ..+|++|.+++.
T Consensus        89 Dilvnnag~~~~~~~~~~~~~~~~~~~~vNl~~~~~~~~~~~~~m~~~~~G~IVnisS~  147 (251)
T d2c07a1          89 DILVNNAGITRDNLFLRMKNDEWEDVLRTNLNSLFYITQPISKRMINNRYGRIINISSI  147 (251)
T ss_dssp             CEEEECCCCCCCCCTTTCCHHHHHHHHHHHTTHHHHHHHHHHHHHHHHTCEEEEEECCT
T ss_pred             eeeeeccccccccccccccHHHHhhhheeeehhhhhhhhhcCcccccCCCeEEEEECCH
Confidence            99999988521                         223344444  456999999864

>d1iy8a_ c.2.1.2 (A:) Levodione reductase {Corynebacterium aquaticum [TaxId: 144185]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Tyrosine-dependent oxidoreductases
domain: Levodione reductase
species: Corynebacterium aquaticum [TaxId: 144185]

Probab=97.66  E-value=0.00033  Score=59.27  Aligned_cols=99  Identities=18%  Similarity=0.281  Sum_probs=69.6

Q ss_pred             CCCEEEEEcC-ChHHHHHHHHHHHcCCeEEEEeCCchhHHHHHHHc-----CCCE---EecCCCHHHHHHh-------cC
Q 018067          183 PGMHVGVVGL-GGLGHVAVKFAKAMGVKVTVISTSPSKKSEAIERL-----GADS---FLVSRDQDEMQAA-------MG  246 (361)
Q Consensus       183 ~g~~vlV~Ga-g~vG~~a~~la~~~g~~vi~~~~~~~~~~~~~~~~-----g~~~---vv~~~~~~~~~~~-------~~  246 (361)
                      .|+++||.|+ +++|.++++.+-..|++|++++++.++.++..+++     +...   ..|-.+++.++.+       .+
T Consensus         3 ~gK~alITGas~GIG~aia~~la~~Ga~V~i~~r~~~~l~~~~~~~~~~~~~~~~~~~~~Dvt~~~~v~~~~~~~~~~~G   82 (258)
T d1iy8a_           3 TDRVVLITGGGSGLGRATAVRLAAEGAKLSLVDVSSEGLEASKAAVLETAPDAEVLTTVADVSDEAQVEAYVTATTERFG   82 (258)
T ss_dssp             TTCEEEEETTTSHHHHHHHHHHHHTTCEEEEEESCHHHHHHHHHHHHHHCTTCCEEEEECCTTSHHHHHHHHHHHHHHHS
T ss_pred             CCCEEEEeCCCCHHHHHHHHHHHHCCCEEEEEECCHHHHHHHHHHHHhhCCCCeEEEEeccCCCHHHHHHHHHHHHHHhC
Confidence            5789999997 99999999999999999999999988766554433     2222   2355665544433       25


Q ss_pred             CccEEEEcCCCcc--------------------------cHHHHHhcc--ccCCEEEEecCCC
Q 018067          247 TMDGIIDTVSAVH--------------------------PLMPLIGLL--KSQGKLVLVGAPE  281 (361)
Q Consensus       247 g~d~vid~~g~~~--------------------------~~~~~~~~l--~~~G~~v~~g~~~  281 (361)
                      ++|++++++|...                          ..+.++..+  +.+|+++.+++..
T Consensus        83 ~iDiLVnnAG~~~~~~~~~~~~~~~~~~~~~vNl~g~~~~~~~~~~~m~~~~~G~Ii~isS~~  145 (258)
T d1iy8a_          83 RIDGFFNNAGIEGKQNPTESFTAAEFDKVVSINLRGVFLGLEKVLKIMREQGSGMVVNTASVG  145 (258)
T ss_dssp             CCSEEEECCCCCCCCBCGGGSCHHHHHHHHHHHTHHHHHHHHHHHHHHHHHTCCEEEEECCGG
T ss_pred             CCCEEEECCcccccCCchhhhhhhHHHHHhhhhccchhhhhhhhHhhhhhhcCCCCcccccHh
Confidence            7999999988310                          222344444  3679999998743

>d1ydea1 c.2.1.2 (A:4-253) Retinal dehydrogenase/reductase 3 {Human (Homo sapiens) [TaxId: 9606]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Tyrosine-dependent oxidoreductases
domain: Retinal dehydrogenase/reductase 3
species: Human (Homo sapiens) [TaxId: 9606]

Probab=97.65  E-value=0.00014  Score=61.35  Aligned_cols=99  Identities=18%  Similarity=0.251  Sum_probs=73.5

Q ss_pred             CCCCEEEEEcC-ChHHHHHHHHHHHcCCeEEEEeCCchhHHHHHHHcCCCE--EecCCCHHHHHHh-------cCCccEE
Q 018067          182 KPGMHVGVVGL-GGLGHVAVKFAKAMGVKVTVISTSPSKKSEAIERLGADS--FLVSRDQDEMQAA-------MGTMDGI  251 (361)
Q Consensus       182 ~~g~~vlV~Ga-g~vG~~a~~la~~~g~~vi~~~~~~~~~~~~~~~~g~~~--vv~~~~~~~~~~~-------~~g~d~v  251 (361)
                      -+|+++||.|+ +++|.++++.+-..|++|+++++++++.+.+.++++...  ..|-.+++.++++       .++.|++
T Consensus         4 l~GK~alITGas~GIG~aia~~la~~Ga~V~i~~r~~~~~~~~~~~~~~~~~~~~Dvs~~~~v~~~~~~~~~~~g~iDil   83 (250)
T d1ydea1           4 YAGKVVVVTGGGRGIGAGIVRAFVNSGARVVICDKDESGGRALEQELPGAVFILCDVTQEDDVKTLVSETIRRFGRLDCV   83 (250)
T ss_dssp             TTTCEEEEETCSSHHHHHHHHHHHHTTCEEEEEESCHHHHHHHHHHCTTEEEEECCTTSHHHHHHHHHHHHHHHSCCCEE
T ss_pred             CCCCEEEEeCCCCHHHHHHHHHHHHCCCEEEEEECCHHHHHHHHHhcCCCeEEEccCCCHHHHHHHHHHHHHhcCCCCEE
Confidence            36899999997 999999999999999999999999998888877776422  2355565544433       2579999


Q ss_pred             EEcCCCcc--------------------------cHHHHHhccc-cCCEEEEecCC
Q 018067          252 IDTVSAVH--------------------------PLMPLIGLLK-SQGKLVLVGAP  280 (361)
Q Consensus       252 id~~g~~~--------------------------~~~~~~~~l~-~~G~~v~~g~~  280 (361)
                      |+++|...                          ..+.++..|+ .+|+++.+++.
T Consensus        84 VnnAG~~~~~~~~~~~~~~~~~~~~~vNl~g~~~~~~~~~p~m~~~~G~Ii~isS~  139 (250)
T d1ydea1          84 VNNAGHHPPPQRPEETSAQGFRQLLELNLLGTYTLTKLALPYLRKSQGNVINISSL  139 (250)
T ss_dssp             EECCCCCCCCCCGGGCCHHHHHHHHHHHTHHHHHHHHHHHHHHHHHTCEEEEECCH
T ss_pred             EecccccccccccccccHHHHHHHHHHhhhhHHHHHHHhhHHHHhCCCCCcccccc
Confidence            99998421                          2333444553 46899999863

>d1nyta1 c.2.1.7 (A:102-271) Shikimate 5-dehydrogenase AroE {Escherichia coli [TaxId: 562]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Aminoacid dehydrogenase-like, C-terminal domain
domain: Shikimate 5-dehydrogenase AroE
species: Escherichia coli [TaxId: 562]

Probab=97.64  E-value=6.4e-05  Score=59.53  Aligned_cols=105  Identities=17%  Similarity=0.133  Sum_probs=69.6

Q ss_pred             hHhhhcCCCCCCCEEEEEcCChHHHHHHHHHHHcCCeEEEEeCCchhHHHHHHHcCCCEEecCCCHHHHHHhcCCccEEE
Q 018067          173 SPLRFYGLDKPGMHVGVVGLGGLGHVAVKFAKAMGVKVTVISTSPSKKSEAIERLGADSFLVSRDQDEMQAAMGTMDGII  252 (361)
Q Consensus       173 ~~l~~~~~~~~g~~vlV~Gag~vG~~a~~la~~~g~~vi~~~~~~~~~~~~~~~~g~~~vv~~~~~~~~~~~~~g~d~vi  252 (361)
                      .+|++.....+|++|||+|+|+.+.+++..+...|++++++.|+.++.+.+++.+.....+..-..+.  .....+|++|
T Consensus         7 ~~l~~~~~~~~~k~vlIlGaGGaarai~~al~~~g~~i~I~nRt~~ka~~l~~~~~~~~~~~~~~~~~--~~~~~~dliI   84 (170)
T d1nyta1           7 SDLERLSFIRPGLRILLIGAGGASRGVLLPLLSLDCAVTITNRTVSRAEELAKLFAHTGSIQALSMDE--LEGHEFDLII   84 (170)
T ss_dssp             HHHHHHTCCCTTCEEEEECCSHHHHHHHHHHHHTTCEEEEECSSHHHHHHHHHHTGGGSSEEECCSGG--GTTCCCSEEE
T ss_pred             HHHHHcCCCCCCCEEEEECCcHHHHHHHHHhcccceEEEeccchHHHHHHHHHHHhhccccccccccc--ccccccceee
Confidence            34555554468999999999999999999999999999999999998888877765321111111111  1124699999


Q ss_pred             EcCCCccc---HHHHHhccccCCEEEEecC
Q 018067          253 DTVSAVHP---LMPLIGLLKSQGKLVLVGA  279 (361)
Q Consensus       253 d~~g~~~~---~~~~~~~l~~~G~~v~~g~  279 (361)
                      +|+.....   ...-.+.+.++..+.++-.
T Consensus        85 N~Tp~G~~~~~~~~~~~~~~~~~~v~D~vY  114 (170)
T d1nyta1          85 NATSSGISGDIPAIPSSLIHPGIYCYDMFY  114 (170)
T ss_dssp             ECCSCGGGTCCCCCCGGGCCTTCEEEESCC
T ss_pred             cccccCcccCCCCCcHHHhccCcEEEEeec
Confidence            99864320   1112344666666666644

>d1npya1 c.2.1.7 (A:103-269) Shikimate 5-dehydrogenase-like protein HI0607 {Haemophilus influenzae [TaxId: 727]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Aminoacid dehydrogenase-like, C-terminal domain
domain: Shikimate 5-dehydrogenase-like protein HI0607
species: Haemophilus influenzae [TaxId: 727]

Probab=97.63  E-value=0.00013  Score=57.42  Aligned_cols=75  Identities=19%  Similarity=0.177  Sum_probs=58.8

Q ss_pred             hHhhhcCCCCCCCEEEEEcCChHHHHHHHHHHHcCC-eEEEEeCCchhHHHHHHHcCCCEEecCCCHHHHHHhcCCccEE
Q 018067          173 SPLRFYGLDKPGMHVGVVGLGGLGHVAVKFAKAMGV-KVTVISTSPSKKSEAIERLGADSFLVSRDQDEMQAAMGTMDGI  251 (361)
Q Consensus       173 ~~l~~~~~~~~g~~vlV~Gag~vG~~a~~la~~~g~-~vi~~~~~~~~~~~~~~~~g~~~vv~~~~~~~~~~~~~g~d~v  251 (361)
                      ..++... +.++++|+|+|+|+.+.+++..++..|+ ++.++.|+.++...+++.++...+ +...       ...+|++
T Consensus         7 ~~l~~~~-~~~~~~vlIlGaGGaarai~~aL~~~g~~~I~I~nR~~~ka~~L~~~~~~~~~-~~~~-------~~~~Dli   77 (167)
T d1npya1           7 KLIEKYH-LNKNAKVIVHGSGGMAKAVVAAFKNSGFEKLKIYARNVKTGQYLAALYGYAYI-NSLE-------NQQADIL   77 (167)
T ss_dssp             HHHHHTT-CCTTSCEEEECSSTTHHHHHHHHHHTTCCCEEEECSCHHHHHHHHHHHTCEEE-SCCT-------TCCCSEE
T ss_pred             HHHHHcC-CCCCCeEEEECCCHHHHHHHHHHHHCCCCEEEEecccHHHHHHHHHhhhhhhh-hccc-------ccchhhh
Confidence            3455554 4578899999999999999999999998 899999999988888888876543 2111       1368999


Q ss_pred             EEcCC
Q 018067          252 IDTVS  256 (361)
Q Consensus       252 id~~g  256 (361)
                      |+|+.
T Consensus        78 INaTp   82 (167)
T d1npya1          78 VNVTS   82 (167)
T ss_dssp             EECSS
T ss_pred             eeccc
Confidence            99875

>d2bgka1 c.2.1.2 (A:11-278) Rhizome secoisolariciresinol dehydrogenase {Mayapple (Podophyllum peltatum) [TaxId: 35933]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Tyrosine-dependent oxidoreductases
domain: Rhizome secoisolariciresinol dehydrogenase
species: Mayapple (Podophyllum peltatum) [TaxId: 35933]

Probab=97.61  E-value=0.00017  Score=61.41  Aligned_cols=76  Identities=17%  Similarity=0.300  Sum_probs=59.6

Q ss_pred             CCCCEEEEEcC-ChHHHHHHHHHHHcCCeEEEEeCCchhHHHHHHHcCCC---E--EecCCCHHHHHHh-------cCCc
Q 018067          182 KPGMHVGVVGL-GGLGHVAVKFAKAMGVKVTVISTSPSKKSEAIERLGAD---S--FLVSRDQDEMQAA-------MGTM  248 (361)
Q Consensus       182 ~~g~~vlV~Ga-g~vG~~a~~la~~~g~~vi~~~~~~~~~~~~~~~~g~~---~--vv~~~~~~~~~~~-------~~g~  248 (361)
                      -+|+++||.|+ +++|.++++.+...|++|+++++++++.++++++++..   .  ..|-.+++.++.+       .+++
T Consensus         4 L~gKvalITGas~GIG~aia~~la~~Ga~V~i~~r~~~~~~~~~~~l~~~~~~~~~~~Dv~~~~~v~~~~~~~~~~~g~i   83 (268)
T d2bgka1           4 LQDKVAIITGGAGGIGETTAKLFVRYGAKVVIADIADDHGQKVCNNIGSPDVISFVHCDVTKDEDVRNLVDTTIAKHGKL   83 (268)
T ss_dssp             TTTCEEEEESTTSHHHHHHHHHHHHTTCEEEEEESCHHHHHHHHHHHCCTTTEEEEECCTTCHHHHHHHHHHHHHHHSCC
T ss_pred             CCCCEEEEeCCCcHHHHHHHHHHHHCCCEEEEEECCHHHHHHHHHHhcCCCceEEEEccCCCHHHHHHHHHHHHHHcCCc
Confidence            36899999997 99999999999999999999999999888888877631   1  2355565544432       2579


Q ss_pred             cEEEEcCCC
Q 018067          249 DGIIDTVSA  257 (361)
Q Consensus       249 d~vid~~g~  257 (361)
                      |++++++|.
T Consensus        84 D~lVnnAG~   92 (268)
T d2bgka1          84 DIMFGNVGV   92 (268)
T ss_dssp             CEEEECCCC
T ss_pred             ceecccccc
Confidence            999999984

>d2ae2a_ c.2.1.2 (A:) Tropinone reductase {Jimsonweed (Datura stramonium), II [TaxId: 4076]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Tyrosine-dependent oxidoreductases
domain: Tropinone reductase
species: Jimsonweed (Datura stramonium), II [TaxId: 4076]

Probab=97.61  E-value=0.00017  Score=61.21  Aligned_cols=98  Identities=16%  Similarity=0.216  Sum_probs=69.8

Q ss_pred             CCCEEEEEcC-ChHHHHHHHHHHHcCCeEEEEeCCchhHHHHHHHc---CCCE---EecCCCHHHHHHh-------cC-C
Q 018067          183 PGMHVGVVGL-GGLGHVAVKFAKAMGVKVTVISTSPSKKSEAIERL---GADS---FLVSRDQDEMQAA-------MG-T  247 (361)
Q Consensus       183 ~g~~vlV~Ga-g~vG~~a~~la~~~g~~vi~~~~~~~~~~~~~~~~---g~~~---vv~~~~~~~~~~~-------~~-g  247 (361)
                      +|+++||.|+ +++|.++++.+...|++|+++++++++.+++.+++   |...   ..|-.+++.++++       .+ +
T Consensus         7 ~GK~alITGas~GIG~aia~~la~~Ga~V~~~~r~~~~l~~~~~~~~~~g~~~~~~~~Dv~~~~~v~~~~~~~~~~~~~~   86 (259)
T d2ae2a_           7 EGCTALVTGGSRGIGYGIVEELASLGASVYTCSRNQKELNDCLTQWRSKGFKVEASVCDLSSRSERQELMNTVANHFHGK   86 (259)
T ss_dssp             TTCEEEEESCSSHHHHHHHHHHHHTTCEEEEEESCHHHHHHHHHHHHHTTCEEEEEECCTTCHHHHHHHHHHHHHHTTTC
T ss_pred             CCCEEEEeCCCCHHHHHHHHHHHHCCCEEEEEECCHHHHHHHHHHHHhcCCCceEEEeeCCCHHHHHHHHHHHHHHhCCC
Confidence            6899999997 99999999999999999999999988877766554   3322   2345555433322       13 5


Q ss_pred             ccEEEEcCCCcc-------------------------cHHHHHhcc--ccCCEEEEecCC
Q 018067          248 MDGIIDTVSAVH-------------------------PLMPLIGLL--KSQGKLVLVGAP  280 (361)
Q Consensus       248 ~d~vid~~g~~~-------------------------~~~~~~~~l--~~~G~~v~~g~~  280 (361)
                      .|++++++|...                         ..+.++..+  ..+|+++.+++.
T Consensus        87 idilvnnAG~~~~~~~~~~~~e~~~~~~~vNl~~~~~~~~~~~~~m~~~~~G~Ii~isS~  146 (259)
T d2ae2a_          87 LNILVNNAGIVIYKEAKDYTVEDYSLIMSINFEAAYHLSVLAHPFLKASERGNVVFISSV  146 (259)
T ss_dssp             CCEEEECCCCCCCCCGGGCCHHHHHHHHHHHTHHHHHHHHHHHHHHHHTSSEEEEEECCG
T ss_pred             ceEEEECCceeccCccccCCHHHHHHHHhcccceeEEEEeeccchhhhhccccccccccc
Confidence            999999998521                         223344445  457999999864

>d1wmaa1 c.2.1.2 (A:2-276) Carbonyl reductase/20beta-hydroxysteroid dehydrogenase {Human (Homo sapiens) [TaxId: 9606]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Tyrosine-dependent oxidoreductases
domain: Carbonyl reductase/20beta-hydroxysteroid dehydrogenase
species: Human (Homo sapiens) [TaxId: 9606]

Probab=97.60  E-value=8.5e-05  Score=63.66  Aligned_cols=98  Identities=24%  Similarity=0.384  Sum_probs=68.6

Q ss_pred             CCCEE-EEEcC-ChHHHHHHHH-HHHcCCeEEEEeCCchhHHHHHHHc---CCC---EEecCCCHHHHHHh-------cC
Q 018067          183 PGMHV-GVVGL-GGLGHVAVKF-AKAMGVKVTVISTSPSKKSEAIERL---GAD---SFLVSRDQDEMQAA-------MG  246 (361)
Q Consensus       183 ~g~~v-lV~Ga-g~vG~~a~~l-a~~~g~~vi~~~~~~~~~~~~~~~~---g~~---~vv~~~~~~~~~~~-------~~  246 (361)
                      .|.+| ||.|+ ++||+++++. ++..|++|++++++.++.+++.+++   +.+   ...|-.+.+.++++       .+
T Consensus         1 ~g~rVAlVTGas~GIG~a~A~~la~~~g~~Vi~~~r~~~~~~~~~~~l~~~~~~~~~~~~Dvs~~~sv~~~~~~~~~~~g   80 (275)
T d1wmaa1           1 SGIHVALVTGGNKGIGLAIVRDLCRLFSGDVVLTARDVTRGQAAVQQLQAEGLSPRFHQLDIDDLQSIRALRDFLRKEYG   80 (275)
T ss_dssp             CCCCEEEESSCSSHHHHHHHHHHHHHSSSEEEEEESSHHHHHHHHHHHHHTTCCCEEEECCTTCHHHHHHHHHHHHHHHS
T ss_pred             CCCeEEEECCCCCHHHHHHHHHHHHhCCCEEEEEECCHHHHHHHHHHHHhcCCcEEEEEEecCCHHHHHHHHHHHHHhcC
Confidence            36777 55687 9999988865 5566999999999998877776655   332   22355555443332       25


Q ss_pred             CccEEEEcCCCcc-------------------------cHHHHHhccccCCEEEEecCC
Q 018067          247 TMDGIIDTVSAVH-------------------------PLMPLIGLLKSQGKLVLVGAP  280 (361)
Q Consensus       247 g~d~vid~~g~~~-------------------------~~~~~~~~l~~~G~~v~~g~~  280 (361)
                      ++|++|+++|...                         ..+.++..|++.|+++.++..
T Consensus        81 ~iDiLVnNAGi~~~~~~~~~~~~~~~~~~~vN~~g~~~l~~~~lp~m~~~g~ivnisS~  139 (275)
T d1wmaa1          81 GLDVLVNNAGIAFKVADPTPFHIQAEVTMKTNFFGTRDVCTELLPLIKPQGRVVNVSSI  139 (275)
T ss_dssp             SEEEEEECCCCCCCTTCCSCHHHHHHHHHHHHTHHHHHHHHHHGGGEEEEEEEEEECCH
T ss_pred             CcEEEEEcCCcCCCCCcccCCHHHHHHHHHHHHHHHHHHHHHHHHHHHhcCCccccccc
Confidence            7999999998521                         234456677889999999763

>d1bdba_ c.2.1.2 (A:) Cis-biphenyl-2,3-dihydrodiol-2,3-dehydrogenase {Pseudomonas sp., lb400 [TaxId: 306]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Tyrosine-dependent oxidoreductases
domain: Cis-biphenyl-2,3-dihydrodiol-2,3-dehydrogenase
species: Pseudomonas sp., lb400 [TaxId: 306]

Probab=97.58  E-value=0.00012  Score=62.67  Aligned_cols=75  Identities=27%  Similarity=0.339  Sum_probs=60.2

Q ss_pred             CCCEEEEEcC-ChHHHHHHHHHHHcCCeEEEEeCCchhHHHHHHHcCCCE---EecCCCHHHHHHh-------cCCccEE
Q 018067          183 PGMHVGVVGL-GGLGHVAVKFAKAMGVKVTVISTSPSKKSEAIERLGADS---FLVSRDQDEMQAA-------MGTMDGI  251 (361)
Q Consensus       183 ~g~~vlV~Ga-g~vG~~a~~la~~~g~~vi~~~~~~~~~~~~~~~~g~~~---vv~~~~~~~~~~~-------~~g~d~v  251 (361)
                      +|+++||.|+ +++|.++++.+...|++|+++++++++..++.+++|.+.   ..|..+++.++++       .+++|++
T Consensus         4 ~gK~alITGas~GIG~aia~~la~~Ga~V~i~~r~~~~l~~~~~~~~~~~~~~~~Dv~~~~~~~~~~~~~~~~~g~idil   83 (276)
T d1bdba_           4 KGEAVLITGGASGLGRALVDRFVAEGAKVAVLDKSAERLAELETDHGDNVLGIVGDVRSLEDQKQAASRCVARFGKIDTL   83 (276)
T ss_dssp             TTCEEEEETTTSHHHHHHHHHHHHTTCEEEEEESCHHHHHHHHHHHGGGEEEEECCTTCHHHHHHHHHHHHHHHSCCCEE
T ss_pred             CCCEEEEeCCCCHHHHHHHHHHHHCCCEEEEEECCHHHHHHHHHHcCCCeeEEecccccHHHHHHHHHHHHHHhCCcccc
Confidence            5899999997 999999999999999999999999999888888887542   2355555443332       2579999


Q ss_pred             EEcCCC
Q 018067          252 IDTVSA  257 (361)
Q Consensus       252 id~~g~  257 (361)
                      ++++|.
T Consensus        84 vnnAG~   89 (276)
T d1bdba_          84 IPNAGI   89 (276)
T ss_dssp             ECCCCC
T ss_pred             cccccc
Confidence            999983

>d1xq1a_ c.2.1.2 (A:) Tropinone reductase {Thale cress (Arabidopsis thaliana) [TaxId: 3702]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Tyrosine-dependent oxidoreductases
domain: Tropinone reductase
species: Thale cress (Arabidopsis thaliana) [TaxId: 3702]

Probab=97.58  E-value=0.00015  Score=61.46  Aligned_cols=99  Identities=19%  Similarity=0.256  Sum_probs=68.0

Q ss_pred             CCCEEEEEcC-ChHHHHHHHHHHHcCCeEEEEeCCchhHHHHHHHc---CCC---EEecCCCHHHHHH----h----cCC
Q 018067          183 PGMHVGVVGL-GGLGHVAVKFAKAMGVKVTVISTSPSKKSEAIERL---GAD---SFLVSRDQDEMQA----A----MGT  247 (361)
Q Consensus       183 ~g~~vlV~Ga-g~vG~~a~~la~~~g~~vi~~~~~~~~~~~~~~~~---g~~---~vv~~~~~~~~~~----~----~~g  247 (361)
                      +|+++||.|+ +++|.++++.+...|++|+++++++++..++.+++   +..   ...|..+++.++.    +    .+.
T Consensus         7 kgK~alVTGas~GIG~aiA~~la~~Ga~V~~~~r~~~~l~~~~~~~~~~~~~~~~~~~Dv~~~~~v~~~~~~~~~~~~g~   86 (259)
T d1xq1a_           7 KAKTVLVTGGTKGIGHAIVEEFAGFGAVIHTCARNEYELNECLSKWQKKGFQVTGSVCDASLRPEREKLMQTVSSMFGGK   86 (259)
T ss_dssp             TTCEEEETTTTSHHHHHHHHHHHHTTCEEEEEESCHHHHHHHHHHHHHTTCCEEEEECCTTSHHHHHHHHHHHHHHHTTC
T ss_pred             CCCEEEEeCCCCHHHHHHHHHHHHCCCEEEEEECCHHHHHHHHHHHHhcCCceEEEeccCCCHHHHHHHHHHHHHHhCCC
Confidence            6899999987 99999999999999999999999988877776554   222   2235555543322    1    135


Q ss_pred             ccEEEEcCCCcc-------------------------cHHHHHhcc--ccCCEEEEecCCC
Q 018067          248 MDGIIDTVSAVH-------------------------PLMPLIGLL--KSQGKLVLVGAPE  281 (361)
Q Consensus       248 ~d~vid~~g~~~-------------------------~~~~~~~~l--~~~G~~v~~g~~~  281 (361)
                      +|++++++|...                         ..+.++..+  +.+|+++.++...
T Consensus        87 idilvnnAG~~~~~~~~~~~~~~~~~~~~vNl~g~~~~~~~~~~~m~~~~~G~Iv~isS~~  147 (259)
T d1xq1a_          87 LDILINNLGAIRSKPTLDYTAEDFSFHISTNLESAYHLSQLAHPLLKASGCGNIIFMSSIA  147 (259)
T ss_dssp             CSEEEEECCC------CCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHSSCEEEEEC---
T ss_pred             cccccccccccCCCchhhCCHHHHHHHHHHHhhhheeeehhhhhccccccccccccccccc
Confidence            899999998531                         223344445  3569999998643

>d2ew8a1 c.2.1.2 (A:3-249) (s)-1-phenylethanol dehydrogenase {Azoarcus sp. ebn1 [TaxId: 76114]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Tyrosine-dependent oxidoreductases
domain: (s)-1-phenylethanol dehydrogenase
species: Azoarcus sp. ebn1 [TaxId: 76114]

Probab=97.57  E-value=0.00043  Score=58.11  Aligned_cols=98  Identities=13%  Similarity=0.221  Sum_probs=69.5

Q ss_pred             CCCEEEEEcC-ChHHHHHHHHHHHcCCeEEEEeCCchh-HHHHHHHcCCCE---EecCCCHHHHHHh-------cCCccE
Q 018067          183 PGMHVGVVGL-GGLGHVAVKFAKAMGVKVTVISTSPSK-KSEAIERLGADS---FLVSRDQDEMQAA-------MGTMDG  250 (361)
Q Consensus       183 ~g~~vlV~Ga-g~vG~~a~~la~~~g~~vi~~~~~~~~-~~~~~~~~g~~~---vv~~~~~~~~~~~-------~~g~d~  250 (361)
                      +|+++||.|+ +++|.++++.+...|++|+++++++++ .....++.|.+.   ..|-.+++.++.+       .+++|+
T Consensus         4 ~gKvalVTGas~GIG~aia~~la~~Ga~V~~~~~~~~~~~~~~~~~~g~~~~~~~~Dvs~~~~v~~~~~~~~~~~G~iDi   83 (247)
T d2ew8a1           4 KDKLAVITGGANGIGRAIAERFAVEGADIAIADLVPAPEAEAAIRNLGRRVLTVKCDVSQPGDVEAFGKQVISTFGRCDI   83 (247)
T ss_dssp             TTCEEEEETTTSHHHHHHHHHHHHTTCEEEEEESSCCHHHHHHHHHTTCCEEEEECCTTCHHHHHHHHHHHHHHHSCCCE
T ss_pred             CCCEEEEeCCCCHHHHHHHHHHHHCCCEEEEEECCchHHHHHHHHHcCCcEEEEEeeCCCHHHHHHHHHHHHHHcCCCCE
Confidence            5789999997 999999999999999999999987643 445556777543   2355565544433       257999


Q ss_pred             EEEcCCCcc-------------------------cHHHHHhcc--ccCCEEEEecCC
Q 018067          251 IIDTVSAVH-------------------------PLMPLIGLL--KSQGKLVLVGAP  280 (361)
Q Consensus       251 vid~~g~~~-------------------------~~~~~~~~l--~~~G~~v~~g~~  280 (361)
                      +++++|...                         ..+.++..+  ..+|+++.+++.
T Consensus        84 lVnnAG~~~~~~~~~~~~e~~~~~~~vNl~~~~~~~~~~~~~m~~~~~G~Iv~isS~  140 (247)
T d2ew8a1          84 LVNNAGIYPLIPFDELTFEQWKKTFEINVDSGFLMAKAFVPGMKRNGWGRIINLTST  140 (247)
T ss_dssp             EEECCCCCCCCCGGGCCHHHHHHHHHHHTHHHHHHHHHHHHHHHHHTCEEEEEECCG
T ss_pred             EEECCCCCCCCChHhCCHHHhhhhheeehhhhhHHHHHHHhHHHhcCCCCccccccc
Confidence            999998521                         223344455  346999999864

>d1x1ta1 c.2.1.2 (A:1-260) D(-)-3-hydroxybutyrate dehydrogenase {Pseudomonas fragi [TaxId: 296]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Tyrosine-dependent oxidoreductases
domain: D(-)-3-hydroxybutyrate dehydrogenase
species: Pseudomonas fragi [TaxId: 296]

Probab=97.55  E-value=0.00032  Score=59.43  Aligned_cols=98  Identities=14%  Similarity=0.240  Sum_probs=67.1

Q ss_pred             CCCEEEEEcC-ChHHHHHHHHHHHcCCeEEEEeCCch-hHHHHH----HHcCCCEE---ecCCCHHHHHHh-------cC
Q 018067          183 PGMHVGVVGL-GGLGHVAVKFAKAMGVKVTVISTSPS-KKSEAI----ERLGADSF---LVSRDQDEMQAA-------MG  246 (361)
Q Consensus       183 ~g~~vlV~Ga-g~vG~~a~~la~~~g~~vi~~~~~~~-~~~~~~----~~~g~~~v---v~~~~~~~~~~~-------~~  246 (361)
                      +|+++||.|+ +++|.++++.+...|++|++++++++ +.+.+.    ++.|.+..   .|-.+++.++++       .+
T Consensus         3 ~gK~alITGas~GIG~aiA~~la~~Ga~V~~~~r~~~~~~~~~~~~~~~~~g~~~~~~~~Dv~~~~~v~~~~~~~~~~~G   82 (260)
T d1x1ta1           3 KGKVAVVTGSTSGIGLGIATALAAQGADIVLNGFGDAAEIEKVRAGLAAQHGVKVLYDGADLSKGEAVRGLVDNAVRQMG   82 (260)
T ss_dssp             TTCEEEETTCSSHHHHHHHHHHHHTTCEEEEECCSCHHHHHHHHHHHHHHHTSCEEEECCCTTSHHHHHHHHHHHHHHHS
T ss_pred             CcCEEEEeCCCCHHHHHHHHHHHHCCCEEEEEeCCcHHHHHHHHHHHHHhcCCcEEEEECCCCCHHHHHHHHHHHHHHhC
Confidence            6889999987 99999999999999999999998753 333332    33454432   245555444332       25


Q ss_pred             CccEEEEcCCCcc-------------------------cHHHHHhccc--cCCEEEEecCC
Q 018067          247 TMDGIIDTVSAVH-------------------------PLMPLIGLLK--SQGKLVLVGAP  280 (361)
Q Consensus       247 g~d~vid~~g~~~-------------------------~~~~~~~~l~--~~G~~v~~g~~  280 (361)
                      +.|++|+++|...                         ..+.++..++  .+|++|.+++.
T Consensus        83 ~iDiLVnnAG~~~~~~~~~~~~~~~~~~~~vNl~g~~~~~~~~~~~m~~~~~G~Iv~isS~  143 (260)
T d1x1ta1          83 RIDILVNNAGIQHTALIEDFPTEKWDAILALNLSAVFHGTAAALPHMKKQGFGRIINIASA  143 (260)
T ss_dssp             CCSEEEECCCCCCCCCGGGCCHHHHHHHHHHHTHHHHHHHHHHHHHHHHHTCEEEEEECCG
T ss_pred             CCcEEEeecccccCCchhhhhHHhhhhhhhccccccccccchhhhhHhhcCCceEeecccc
Confidence            7999999998531                         2334455554  36899999864

>d1dl5a1 c.66.1.7 (A:1-213) Protein-L-isoaspartyl O-methyltransferase {Thermotoga maritima [TaxId: 2336]}

class: Alpha and beta proteins (a/b)
fold: S-adenosyl-L-methionine-dependent methyltransferases
superfamily: S-adenosyl-L-methionine-dependent methyltransferases
family: Protein-L-isoaspartyl O-methyltransferase
domain: Protein-L-isoaspartyl O-methyltransferase
species: Thermotoga maritima [TaxId: 2336]

Probab=97.54  E-value=0.0001  Score=60.63  Aligned_cols=99  Identities=23%  Similarity=0.204  Sum_probs=68.4

Q ss_pred             cCCCCCCCEEEEEcCChHHHHHHHHHHHcC--CeEEEEeCCchhHHHHHH---HcCCCE-EecCCCHHHHHHhcCCccEE
Q 018067          178 YGLDKPGMHVGVVGLGGLGHVAVKFAKAMG--VKVTVISTSPSKKSEAIE---RLGADS-FLVSRDQDEMQAAMGTMDGI  251 (361)
Q Consensus       178 ~~~~~~g~~vlV~Gag~vG~~a~~la~~~g--~~vi~~~~~~~~~~~~~~---~~g~~~-vv~~~~~~~~~~~~~g~d~v  251 (361)
                      ...+++|++||-+|+|. |..++.+++..|  .+|+.++.+++..+.+.+   +.+.+. .+...+........+.||+|
T Consensus        70 ~l~l~~g~~VLdiG~Gt-G~~s~~la~~~~~~g~V~~id~~~~~~~~a~~~~~~~~~~n~~~~~~d~~~~~~~~~~fD~I  148 (213)
T d1dl5a1          70 WVGLDKGMRVLEIGGGT-GYNAAVMSRVVGEKGLVVSVEYSRKICEIAKRNVERLGIENVIFVCGDGYYGVPEFSPYDVI  148 (213)
T ss_dssp             HTTCCTTCEEEEECCTT-SHHHHHHHHHHCTTCEEEEEESCHHHHHHHHHHHHHTTCCSEEEEESCGGGCCGGGCCEEEE
T ss_pred             hhhccccceEEEecCcc-chhHHHHHHHhCCCCcEEEeecchhhHHHhhhhHhhhcccccccccCchHHccccccchhhh
Confidence            44589999999999876 888889999876  489988888765544433   334332 22222211111123469999


Q ss_pred             EEcCCCcccHHHHHhccccCCEEEEe
Q 018067          252 IDTVSAVHPLMPLIGLLKSQGKLVLV  277 (361)
Q Consensus       252 id~~g~~~~~~~~~~~l~~~G~~v~~  277 (361)
                      +...+-....+..++.|++||+++..
T Consensus       149 ~~~~~~~~~p~~l~~~LkpGG~lv~p  174 (213)
T d1dl5a1         149 FVTVGVDEVPETWFTQLKEGGRVIVP  174 (213)
T ss_dssp             EECSBBSCCCHHHHHHEEEEEEEEEE
T ss_pred             hhhccHHHhHHHHHHhcCCCcEEEEE
Confidence            98877777567889999999999874

>d1e5qa1 c.2.1.3 (A:2-124,A:392-450) Saccharopine reductase {Rice blast fungus (Magnaporthe grisea) [TaxId: 148305]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Glyceraldehyde-3-phosphate dehydrogenase-like, N-terminal domain
domain: Saccharopine reductase
species: Rice blast fungus (Magnaporthe grisea) [TaxId: 148305]

Probab=97.53  E-value=0.00027  Score=55.86  Aligned_cols=97  Identities=13%  Similarity=0.149  Sum_probs=72.1

Q ss_pred             CCEEEEEcCChHHHHHHHHHHHcCCeEEEEeCCchhHHHHHHHcCCCEEe--cCCCHHHHHHhcCCccEEEEcCCCcccH
Q 018067          184 GMHVGVVGLGGLGHVAVKFAKAMGVKVTVISTSPSKKSEAIERLGADSFL--VSRDQDEMQAAMGTMDGIIDTVSAVHPL  261 (361)
Q Consensus       184 g~~vlV~Gag~vG~~a~~la~~~g~~vi~~~~~~~~~~~~~~~~g~~~vv--~~~~~~~~~~~~~g~d~vid~~g~~~~~  261 (361)
                      +++|+|+|+|.+|..+++.+...|.+|++++++.++...++++++...+.  +..............|.++.+.......
T Consensus         2 ~K~IliiGaG~~G~~~a~~L~~~g~~V~v~dr~~~~a~~l~~~~~~~~~~~~~~~~~~~~~~~i~~~~~~i~~~~~~~~~   81 (182)
T d1e5qa1           2 TKSVLMLGSGFVTRPTLDVLTDSGIKVTVACRTLESAKKLSAGVQHSTPISLDVNDDAALDAEVAKHDLVISLIPYTFHA   81 (182)
T ss_dssp             CCEEEEECCSTTHHHHHHHHHTTTCEEEEEESCHHHHHHHHTTCTTEEEEECCTTCHHHHHHHHTTSSEEEECSCGGGHH
T ss_pred             CCEEEEECCCHHHHHHHHHHHhCCCEEEEEECChHHHHHHHhcccccccccccccchhhhHhhhhccceeEeeccchhhh
Confidence            67899999999999999999999999999999999998887777653322  2223334444455788888887766545


Q ss_pred             HHHHhccccCCEEEEecCC
Q 018067          262 MPLIGLLKSQGKLVLVGAP  280 (361)
Q Consensus       262 ~~~~~~l~~~G~~v~~g~~  280 (361)
                      .....+.+.+..++.+...
T Consensus        82 ~~~~~~~~~~~~~~~~~~~  100 (182)
T d1e5qa1          82 TVIKSAIRQKKHVVTTSYV  100 (182)
T ss_dssp             HHHHHHHHHTCEEECSSCC
T ss_pred             HHHHHHHhhccceeecccC
Confidence            5566666777777776543

>d1li4a1 c.2.1.4 (A:190-352) S-adenosylhomocystein hydrolase {Human (Homo sapiens) [TaxId: 9606]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Formate/glycerate dehydrogenases, NAD-domain
domain: S-adenosylhomocystein hydrolase
species: Human (Homo sapiens) [TaxId: 9606]

Probab=97.47  E-value=0.00075  Score=52.17  Aligned_cols=107  Identities=15%  Similarity=0.207  Sum_probs=78.2

Q ss_pred             hhhhHhhh-cCCCCCCCEEEEEcCChHHHHHHHHHHHcCCeEEEEeCCchhHHHHHHHcCCCEEecCCCHHHHHHhcCCc
Q 018067          170 TVYSPLRF-YGLDKPGMHVGVVGLGGLGHVAVKFAKAMGVKVTVISTSPSKKSEAIERLGADSFLVSRDQDEMQAAMGTM  248 (361)
Q Consensus       170 ta~~~l~~-~~~~~~g~~vlV~Gag~vG~~a~~la~~~g~~vi~~~~~~~~~~~~~~~~g~~~vv~~~~~~~~~~~~~g~  248 (361)
                      +.+.++.+ ....-.|++|+|+|-|-+|.-.++.++.+|++|++++..+-+..++. --|.. +.      .+.+.....
T Consensus         9 S~~~~~~r~t~~~l~Gk~v~V~GyG~iG~g~A~~~rg~G~~V~v~e~dp~~al~A~-~dG~~-v~------~~~~a~~~a   80 (163)
T d1li4a1           9 SLIDGIKRATDVMIAGKVAVVAGYGDVGKGCAQALRGFGARVIITEIDPINALQAA-MEGYE-VT------TMDEACQEG   80 (163)
T ss_dssp             HHHHHHHHHHCCCCTTCEEEEECCSHHHHHHHHHHHHTTCEEEEECSCHHHHHHHH-HTTCE-EC------CHHHHTTTC
T ss_pred             hHHHHHHHHhCceecCCEEEEeccccccHHHHHHHHhCCCeeEeeecccchhHHhh-cCceE-ee------ehhhhhhhc
Confidence            34444444 44456899999999999999999999999999999998876544442 22432 21      234555678


Q ss_pred             cEEEEcCCCcc-cHHHHHhccccCCEEEEecCCCCCc
Q 018067          249 DGIIDTVSAVH-PLMPLIGLLKSQGKLVLVGAPEKPL  284 (361)
Q Consensus       249 d~vid~~g~~~-~~~~~~~~l~~~G~~v~~g~~~~~~  284 (361)
                      |+++-+.|+.+ .-..-++.|+++..++.+|.....+
T Consensus        81 divvtaTGn~~vI~~eh~~~MKdgaIL~N~Ghfd~EI  117 (163)
T d1li4a1          81 NIFVTTTGCIDIILGRHFEQMKDDAIVCNIGHFDVEI  117 (163)
T ss_dssp             SEEEECSSCSCSBCHHHHTTCCTTEEEEECSSSTTSB
T ss_pred             cEEEecCCCccchhHHHHHhccCCeEEEEecccccee
Confidence            99999999854 3457889999999999998754433

>d1pjqa1 c.2.1.11 (A:1-113) Siroheme synthase CysG, domain 1 {Salmonella typhimurium [TaxId: 90371]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Siroheme synthase N-terminal domain-like
domain: Siroheme synthase CysG, domain 1
species: Salmonella typhimurium [TaxId: 90371]

Probab=97.45  E-value=0.0008  Score=48.99  Aligned_cols=96  Identities=11%  Similarity=-0.014  Sum_probs=66.8

Q ss_pred             CCCEEEEEcCChHHHHHHHHHHHcCCeEEEEeCCchh-HHHHHHHcCCCEEecCCCHHHHHHhcCCccEEEEcCCCcccH
Q 018067          183 PGMHVGVVGLGGLGHVAVKFAKAMGVKVTVISTSPSK-KSEAIERLGADSFLVSRDQDEMQAAMGTMDGIIDTVSAVHPL  261 (361)
Q Consensus       183 ~g~~vlV~Gag~vG~~a~~la~~~g~~vi~~~~~~~~-~~~~~~~~g~~~vv~~~~~~~~~~~~~g~d~vid~~g~~~~~  261 (361)
                      .|++|||+|+|.+|..-++.+...|++|++++..... ...+++.-+.. .+...- +  .+.-.++++|+-+.+....-
T Consensus        11 ~~k~vlVvG~G~va~~ka~~ll~~ga~v~v~~~~~~~~~~~~~~~~~i~-~~~~~~-~--~~dl~~~~lv~~at~d~~~n   86 (113)
T d1pjqa1          11 RDRDCLIVGGGDVAERKARLLLEAGARLTVNALTFIPQFTVWANEGMLT-LVEGPF-D--ETLLDSCWLAIAATDDDTVN   86 (113)
T ss_dssp             BTCEEEEECCSHHHHHHHHHHHHTTBEEEEEESSCCHHHHHHHTTTSCE-EEESSC-C--GGGGTTCSEEEECCSCHHHH
T ss_pred             CCCEEEEECCCHHHHHHHHHHHHCCCeEEEEeccCChHHHHHHhcCCce-eeccCC-C--HHHhCCCcEEeecCCCHHHH
Confidence            5789999999999999999999999999888765533 33332222222 222111 0  12234799999999988734


Q ss_pred             HHHHhccccCCEEEEecCCCC
Q 018067          262 MPLIGLLKSQGKLVLVGAPEK  282 (361)
Q Consensus       262 ~~~~~~l~~~G~~v~~g~~~~  282 (361)
                      .......++.|..|.+...+.
T Consensus        87 ~~i~~~a~~~~ilVNv~D~p~  107 (113)
T d1pjqa1          87 QRVSDAAESRRIFCNVVDAPK  107 (113)
T ss_dssp             HHHHHHHHHTTCEEEETTCTT
T ss_pred             HHHHHHHHHcCCEEEeCCChh
Confidence            567778899999999876543

>d1jg1a_ c.66.1.7 (A:) Protein-L-isoaspartyl O-methyltransferase {Archaeon Pyrococcus furiosus [TaxId: 2261]}

class: Alpha and beta proteins (a/b)
fold: S-adenosyl-L-methionine-dependent methyltransferases
superfamily: S-adenosyl-L-methionine-dependent methyltransferases
family: Protein-L-isoaspartyl O-methyltransferase
domain: Protein-L-isoaspartyl O-methyltransferase
species: Archaeon Pyrococcus furiosus [TaxId: 2261]

Probab=97.44  E-value=0.00012  Score=60.00  Aligned_cols=99  Identities=30%  Similarity=0.339  Sum_probs=69.4

Q ss_pred             cCCCCCCCEEEEEcCChHHHHHHHHHHHcCCeEEEEeCCchhHHHH---HHHcCCCEE-ecCCCHHHHHHhcCCccEEEE
Q 018067          178 YGLDKPGMHVGVVGLGGLGHVAVKFAKAMGVKVTVISTSPSKKSEA---IERLGADSF-LVSRDQDEMQAAMGTMDGIID  253 (361)
Q Consensus       178 ~~~~~~g~~vlV~Gag~vG~~a~~la~~~g~~vi~~~~~~~~~~~~---~~~~g~~~v-v~~~~~~~~~~~~~g~d~vid  253 (361)
                      ...+++|++||.+|+|. |..++.+++..|.+|+.+...++-...+   .+++|.+.+ +...+...-......||.++-
T Consensus        73 ~L~l~~g~~VLeIGsGs-GY~taila~l~g~~V~~ie~~~~l~~~a~~~l~~~g~~nv~~~~gd~~~g~~~~~pfD~Iiv  151 (215)
T d1jg1a_          73 IANLKPGMNILEVGTGS-GWNAALISEIVKTDVYTIERIPELVEFAKRNLERAGVKNVHVILGDGSKGFPPKAPYDVIIV  151 (215)
T ss_dssp             HHTCCTTCCEEEECCTT-SHHHHHHHHHHCSCEEEEESCHHHHHHHHHHHHHTTCCSEEEEESCGGGCCGGGCCEEEEEE
T ss_pred             hhccCccceEEEecCCC-ChhHHHHHHhhCceeEEEeccHHHHHHHHHHHHHcCCceeEEEECccccCCcccCcceeEEe
Confidence            34589999999999875 8888888888888899998886533222   345675432 222331111112347999988


Q ss_pred             cCCCcccHHHHHhccccCCEEEEe
Q 018067          254 TVSAVHPLMPLIGLLKSQGKLVLV  277 (361)
Q Consensus       254 ~~g~~~~~~~~~~~l~~~G~~v~~  277 (361)
                      +.+........++.|++||+++..
T Consensus       152 ~~a~~~ip~~l~~qL~~gGrLv~p  175 (215)
T d1jg1a_         152 TAGAPKIPEPLIEQLKIGGKLIIP  175 (215)
T ss_dssp             CSBBSSCCHHHHHTEEEEEEEEEE
T ss_pred             ecccccCCHHHHHhcCCCCEEEEE
Confidence            777776678899999999999875

>d2ag5a1 c.2.1.2 (A:1-245) Dehydrogenase/reductase SDR family member 6, DHRS6 {Human (Homo sapiens) [TaxId: 9606]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Tyrosine-dependent oxidoreductases
domain: Dehydrogenase/reductase SDR family member 6, DHRS6
species: Human (Homo sapiens) [TaxId: 9606]

Probab=97.43  E-value=9e-05  Score=62.36  Aligned_cols=76  Identities=17%  Similarity=0.189  Sum_probs=59.2

Q ss_pred             CCCCEEEEEcC-ChHHHHHHHHHHHcCCeEEEEeCCchhHHHHHHHcCCC-EEecCCCHHHHHHh---cCCccEEEEcCC
Q 018067          182 KPGMHVGVVGL-GGLGHVAVKFAKAMGVKVTVISTSPSKKSEAIERLGAD-SFLVSRDQDEMQAA---MGTMDGIIDTVS  256 (361)
Q Consensus       182 ~~g~~vlV~Ga-g~vG~~a~~la~~~g~~vi~~~~~~~~~~~~~~~~g~~-~vv~~~~~~~~~~~---~~g~d~vid~~g  256 (361)
                      -+|+++||.|+ +++|.++++.+...|++|+++++++++..++.+..+.. ...|....+.+...   .++.|++++++|
T Consensus         4 l~gK~alITGas~GIG~aia~~la~~G~~Vi~~~r~~~~l~~~~~~~~~~~~~~d~~~~~~~~~~~~~~~~id~lVn~ag   83 (245)
T d2ag5a1           4 LDGKVIILTAAAQGIGQAAALAFAREGAKVIATDINESKLQELEKYPGIQTRVLDVTKKKQIDQFANEVERLDVLFNVAG   83 (245)
T ss_dssp             TTTCEEEESSTTSHHHHHHHHHHHHTTCEEEEEESCHHHHGGGGGSTTEEEEECCTTCHHHHHHHHHHCSCCSEEEECCC
T ss_pred             CCCCEEEEeCCCCHHHHHHHHHHHHcCCEEEEEeCCHHHHHHHHhccCCceeeeeccccccccccccccccceeEEeccc
Confidence            46899999987 99999999999999999999999998887776666653 33444444444433   358999999988


Q ss_pred             C
Q 018067          257 A  257 (361)
Q Consensus       257 ~  257 (361)
                      .
T Consensus        84 ~   84 (245)
T d2ag5a1          84 F   84 (245)
T ss_dssp             C
T ss_pred             c
Confidence            6

>d1lssa_ c.2.1.9 (A:) Ktn Mja218 {Archaeon Methanococcus jannaschii [TaxId: 2190]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Potassium channel NAD-binding domain
domain: Ktn Mja218
species: Archaeon Methanococcus jannaschii [TaxId: 2190]

Probab=97.42  E-value=0.00067  Score=50.90  Aligned_cols=74  Identities=15%  Similarity=0.128  Sum_probs=61.0

Q ss_pred             EEEEEcCChHHHHHHHHHHHcCCeEEEEeCCchhHHHHHHHcCCCEEe-cCCCHHHHHHhc-CCccEEEEcCCCcc
Q 018067          186 HVGVVGLGGLGHVAVKFAKAMGVKVTVISTSPSKKSEAIERLGADSFL-VSRDQDEMQAAM-GTMDGIIDTVSAVH  259 (361)
Q Consensus       186 ~vlV~Gag~vG~~a~~la~~~g~~vi~~~~~~~~~~~~~~~~g~~~vv-~~~~~~~~~~~~-~g~d~vid~~g~~~  259 (361)
                      +|+|.|+|.+|...++.+...|..|++++.++++..++.++++...+. |..+++.+.++. ..+|.++-+.+.+.
T Consensus         2 ~IvI~G~G~~G~~la~~L~~~g~~v~vid~d~~~~~~~~~~~~~~vi~Gd~~~~~~l~~~~i~~a~~vv~~t~~d~   77 (132)
T d1lssa_           2 YIIIAGIGRVGYTLAKSLSEKGHDIVLIDIDKDICKKASAEIDALVINGDCTKIKTLEDAGIEDADMYIAVTGKEE   77 (132)
T ss_dssp             EEEEECCSHHHHHHHHHHHHTTCEEEEEESCHHHHHHHHHHCSSEEEESCTTSHHHHHHTTTTTCSEEEECCSCHH
T ss_pred             EEEEECCCHHHHHHHHHHHHCCCCcceecCChhhhhhhhhhhhhhhccCcccchhhhhhcChhhhhhhcccCCcHH
Confidence            689999999999999999999999999999999888887777765443 456667776664 57999999888864

>d1xu9a_ c.2.1.2 (A:) 11-beta-hydroxysteroid dehydrogenase 1 {Human (Homo sapiens) [TaxId: 9606]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Tyrosine-dependent oxidoreductases
domain: 11-beta-hydroxysteroid dehydrogenase 1
species: Human (Homo sapiens) [TaxId: 9606]

Probab=97.39  E-value=0.00048  Score=58.57  Aligned_cols=76  Identities=22%  Similarity=0.229  Sum_probs=54.9

Q ss_pred             CCCCEEEEEcC-ChHHHHHHHHHHHcCCeEEEEeCCchhHHHHHHHc----CCCEE---ecCCCHHHH-------HHhcC
Q 018067          182 KPGMHVGVVGL-GGLGHVAVKFAKAMGVKVTVISTSPSKKSEAIERL----GADSF---LVSRDQDEM-------QAAMG  246 (361)
Q Consensus       182 ~~g~~vlV~Ga-g~vG~~a~~la~~~g~~vi~~~~~~~~~~~~~~~~----g~~~v---v~~~~~~~~-------~~~~~  246 (361)
                      -+|+++||.|+ +++|.+++..+...|++|+++++++++.+++.++.    +....   .+..+.+..       ....+
T Consensus        12 L~GK~alITGassGIG~aiA~~la~~G~~Vil~~r~~~~l~~~~~~~~~~~~~~~~~~~~d~~~~~~~~~~~~~~~~~~g   91 (269)
T d1xu9a_          12 LQGKKVIVTGASKGIGREMAYHLAKMGAHVVVTARSKETLQKVVSHCLELGAASAHYIAGTMEDMTFAEQFVAQAGKLMG   91 (269)
T ss_dssp             GTTCEEEESSCSSHHHHHHHHHHHHTTCEEEEEESCHHHHHHHHHHHHHHTCSEEEEEECCTTCHHHHHHHHHHHHHHHT
T ss_pred             cCCCEEEEeCCCcHHHHHHHHHHHHCCCEEEEEECCHHHHHHHHHHHhhhhcccchhhhhhhhhHHHHHHHHHHHHHHhC
Confidence            36899999998 99999999999999999999999998877765542    33221   123333222       22235


Q ss_pred             CccEEEEcCCC
Q 018067          247 TMDGIIDTVSA  257 (361)
Q Consensus       247 g~d~vid~~g~  257 (361)
                      ..|++++++|.
T Consensus        92 ~~~~li~nag~  102 (269)
T d1xu9a_          92 GLDMLILNHIT  102 (269)
T ss_dssp             SCSEEEECCCC
T ss_pred             Ccccccccccc
Confidence            79999998875

>d1gz6a_ c.2.1.2 (A:) (3R)-hydroxyacyl-CoA dehydrogenase domain of estradiol 17 beta-Dehydrogenase 4 {Rat (Rattus norvegicus) [TaxId: 10116]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Tyrosine-dependent oxidoreductases
domain: (3R)-hydroxyacyl-CoA dehydrogenase domain of estradiol 17 beta-Dehydrogenase 4
species: Rat (Rattus norvegicus) [TaxId: 10116]

Probab=97.37  E-value=0.00047  Score=59.66  Aligned_cols=98  Identities=18%  Similarity=0.295  Sum_probs=66.4

Q ss_pred             CCCEEEEEcC-ChHHHHHHHHHHHcCCeEEEEeCCc---------hhHHHHHHHc---CCCEEecCCCHHHHH----H--
Q 018067          183 PGMHVGVVGL-GGLGHVAVKFAKAMGVKVTVISTSP---------SKKSEAIERL---GADSFLVSRDQDEMQ----A--  243 (361)
Q Consensus       183 ~g~~vlV~Ga-g~vG~~a~~la~~~g~~vi~~~~~~---------~~~~~~~~~~---g~~~vv~~~~~~~~~----~--  243 (361)
                      +|+++||.|+ +++|.+.++.+...|++|++.+++.         +..+++.+++   +.....+..+.+..+    .  
T Consensus         6 ~gKvalITGas~GIG~aiA~~la~~Ga~Vvi~d~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~d~~~~~~~~~~v~~~~   85 (302)
T d1gz6a_           6 DGRVVLVTGAGGGLGRAYALAFAERGALVVVNDLGGDFKGVGKGSSAADKVVEEIRRRGGKAVANYDSVEAGEKLVKTAL   85 (302)
T ss_dssp             TTCEEEETTTTSHHHHHHHHHHHHTTCEEEEECCCBCTTSCBCCSHHHHHHHHHHHHTTCEEEEECCCGGGHHHHHHHHH
T ss_pred             CCCEEEEeCCCCHHHHHHHHHHHHcCCEEEEEeCCchhhhhhhhHHHHHHHHHHHhhcccccccccchHHHHHHHHHHHH
Confidence            6899999997 9999999999999999999986542         3334443333   344445555543222    2  


Q ss_pred             -hcCCccEEEEcCCCcc-------------------------cHHHHHhccc--cCCEEEEecCC
Q 018067          244 -AMGTMDGIIDTVSAVH-------------------------PLMPLIGLLK--SQGKLVLVGAP  280 (361)
Q Consensus       244 -~~~g~d~vid~~g~~~-------------------------~~~~~~~~l~--~~G~~v~~g~~  280 (361)
                       ..+++|++|+++|...                         ..+.++..|+  .+|++|.+++.
T Consensus        86 ~~~G~iDiLVnNAGi~~~~~~~~~~~e~~~~~~~vNl~g~~~~~~~~~p~m~~~~~G~IV~isS~  150 (302)
T d1gz6a_          86 DTFGRIDVVVNNAGILRDRSFSRISDEDWDIIQRVHLRGSFQVTRAAWDHMKKQNYGRIIMTASA  150 (302)
T ss_dssp             HHTSCCCEEEECCCCCCCCCGGGCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHTCEEEEEECCH
T ss_pred             HHcCCCCEEEECCccCCCCChhhCCHHHHhhhhceeehhhHHHHHHhHHHHHhCCCcEEEEeCCh
Confidence             2357999999998531                         3344555563  46899999863

>d1yxma1 c.2.1.2 (A:7-303) Peroxisomal trans 2-enoyl CoA reductase {Human (Homo sapiens) [TaxId: 9606]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Tyrosine-dependent oxidoreductases
domain: Peroxisomal trans 2-enoyl CoA reductase
species: Human (Homo sapiens) [TaxId: 9606]

Probab=97.37  E-value=0.00033  Score=60.53  Aligned_cols=76  Identities=21%  Similarity=0.278  Sum_probs=57.6

Q ss_pred             CCCCEEEEEcC-ChHHHHHHHHHHHcCCeEEEEeCCchhHHHHHHHc--------CCCE---EecCCCHHHHHHh-----
Q 018067          182 KPGMHVGVVGL-GGLGHVAVKFAKAMGVKVTVISTSPSKKSEAIERL--------GADS---FLVSRDQDEMQAA-----  244 (361)
Q Consensus       182 ~~g~~vlV~Ga-g~vG~~a~~la~~~g~~vi~~~~~~~~~~~~~~~~--------g~~~---vv~~~~~~~~~~~-----  244 (361)
                      -+|+++||.|+ +++|.++++.+...|++|++++++.++...+++++        +...   ..|-.+++.+.++     
T Consensus        10 L~gKvalITGas~GIG~aia~~la~~Ga~Vvi~~r~~~~l~~~~~el~~~~~~~~~~~~~~~~~Dvs~~~~v~~~~~~~~   89 (297)
T d1yxma1          10 LQGQVAIVTGGATGIGKAIVKELLELGSNVVIASRKLERLKSAADELQANLPPTKQARVIPIQCNIRNEEEVNNLVKSTL   89 (297)
T ss_dssp             TTTCEEEEETTTSHHHHHHHHHHHHTTCEEEEEESCHHHHHHHHHHHHHTSCTTCCCCEEEEECCTTCHHHHHHHHHHHH
T ss_pred             CCCCEEEEeCCCCHHHHHHHHHHHHCCCEEEEEECCHHHHHHHHHHHHhhhccccCceEEEEeccCCCHHHHHHHHHHHH
Confidence            57899999997 99999999999999999999999988877665544        2222   2345555544332     


Q ss_pred             --cCCccEEEEcCCC
Q 018067          245 --MGTMDGIIDTVSA  257 (361)
Q Consensus       245 --~~g~d~vid~~g~  257 (361)
                        .++.|++|+++|.
T Consensus        90 ~~~G~iDiLVnnAg~  104 (297)
T d1yxma1          90 DTFGKINFLVNNGGG  104 (297)
T ss_dssp             HHHSCCCEEEECCCC
T ss_pred             HHhCCeEEEEeeccc
Confidence              2579999999985

>d1xkqa_ c.2.1.2 (A:) Hypothetical protein R05D8.7 {Caenorhabditis elegans [TaxId: 6239]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Tyrosine-dependent oxidoreductases
domain: Hypothetical protein R05D8.7
species: Caenorhabditis elegans [TaxId: 6239]

Probab=97.35  E-value=0.00031  Score=59.92  Aligned_cols=75  Identities=19%  Similarity=0.319  Sum_probs=56.6

Q ss_pred             CCCEEEEEcC-ChHHHHHHHHHHHcCCeEEEEeCCchhHHHHHHHc---CC---C---EEecCCCHHHHHHh-------c
Q 018067          183 PGMHVGVVGL-GGLGHVAVKFAKAMGVKVTVISTSPSKKSEAIERL---GA---D---SFLVSRDQDEMQAA-------M  245 (361)
Q Consensus       183 ~g~~vlV~Ga-g~vG~~a~~la~~~g~~vi~~~~~~~~~~~~~~~~---g~---~---~vv~~~~~~~~~~~-------~  245 (361)
                      +|+++||.|+ +++|.++++.+...|++|+++++++++.+++.+++   +.   .   ...|-.+++.++.+       .
T Consensus         4 ~gK~alVTGas~GIG~aia~~la~~Ga~V~l~~r~~~~l~~~~~~l~~~~~~~~~~~~~~~Dvs~~~~v~~~~~~~~~~~   83 (272)
T d1xkqa_           4 SNKTVIITGSSNGIGRTTAILFAQEGANVTITGRSSERLEETRQIILKSGVSEKQVNSVVADVTTEDGQDQIINSTLKQF   83 (272)
T ss_dssp             TTCEEEETTCSSHHHHHHHHHHHHTTCEEEEEESCHHHHHHHHHHHHTTTCCGGGEEEEECCTTSHHHHHHHHHHHHHHH
T ss_pred             CCCEEEEeCcCcHHHHHHHHHHHHCCCEEEEEECCHHHHHHHHHHHHhcCCCCCceEEEEccCCCHHHHHHHHHHHHHHh
Confidence            6889999987 99999999999999999999999988877665544   21   1   22355565544332       2


Q ss_pred             CCccEEEEcCCC
Q 018067          246 GTMDGIIDTVSA  257 (361)
Q Consensus       246 ~g~d~vid~~g~  257 (361)
                      +++|++++++|.
T Consensus        84 g~iDilvnnAG~   95 (272)
T d1xkqa_          84 GKIDVLVNNAGA   95 (272)
T ss_dssp             SCCCEEEECCCC
T ss_pred             CCceEEEeCCcc
Confidence            579999999885

>d2jfga1 c.5.1.1 (A:1-93) UDP-N-acetylmuramoyl-L-alanine:D-glutamate ligase MurD {Escherichia coli [TaxId: 562]}

class: Alpha and beta proteins (a/b)
fold: MurCD N-terminal domain
superfamily: MurCD N-terminal domain
family: MurCD N-terminal domain
domain: UDP-N-acetylmuramoyl-L-alanine:D-glutamate ligase MurD
species: Escherichia coli [TaxId: 562]

Probab=97.34  E-value=0.00032  Score=49.27  Aligned_cols=71  Identities=23%  Similarity=0.246  Sum_probs=48.3

Q ss_pred             CCCEEEEEcCChHHHHHHHHHHHcCCeEEEEeCCchh--HHHHHHHcCCCEEecCCCHHHHHHhcCCccEEEEcCCCcc
Q 018067          183 PGMHVGVVGLGGLGHVAVKFAKAMGVKVTVISTSPSK--KSEAIERLGADSFLVSRDQDEMQAAMGTMDGIIDTVSAVH  259 (361)
Q Consensus       183 ~g~~vlV~Gag~vG~~a~~la~~~g~~vi~~~~~~~~--~~~~~~~~g~~~vv~~~~~~~~~~~~~g~d~vid~~g~~~  259 (361)
                      .|++|+|+|.|..|+++++++...|++|++.++....  ...+ + -+....+...+.+.+.    .+|.++-+-|-+.
T Consensus         4 ~~K~v~ViGlG~sG~s~a~~L~~~g~~v~~~D~~~~~~~~~~~-~-~~~~~~~~~~~~~~~~----~~d~vi~SPGi~~   76 (93)
T d2jfga1           4 QGKNVVIIGLGLTGLSCVDFFLARGVTPRVMDTRMTPPGLDKL-P-EAVERHTGSLNDEWLM----AADLIVASPGIAL   76 (93)
T ss_dssp             TTCCEEEECCSHHHHHHHHHHHHTTCCCEEEESSSSCTTGGGS-C-TTSCEEESBCCHHHHH----HCSEEEECTTSCT
T ss_pred             CCCEEEEEeECHHHHHHHHHHHHCCCEEEEeeCCcCchhHHHH-h-hccceeecccchhhhc----cCCEEEECCCCCC
Confidence            5788999999999999999999999999999986542  2111 1 1223333333333332    4788888777654

>d1i1na_ c.66.1.7 (A:) Protein-L-isoaspartyl O-methyltransferase {Human (Homo sapiens) [TaxId: 9606]}

class: Alpha and beta proteins (a/b)
fold: S-adenosyl-L-methionine-dependent methyltransferases
superfamily: S-adenosyl-L-methionine-dependent methyltransferases
family: Protein-L-isoaspartyl O-methyltransferase
domain: Protein-L-isoaspartyl O-methyltransferase
species: Human (Homo sapiens) [TaxId: 9606]

Probab=97.34  E-value=0.00032  Score=57.96  Aligned_cols=97  Identities=26%  Similarity=0.229  Sum_probs=65.5

Q ss_pred             CCCCCCEEEEEcCChHHHHHHHHHHHcC--CeEEEEeCCchhHHHHHH---HcCC-----C-EEecCCCHHHHHHhcCCc
Q 018067          180 LDKPGMHVGVVGLGGLGHVAVKFAKAMG--VKVTVISTSPSKKSEAIE---RLGA-----D-SFLVSRDQDEMQAAMGTM  248 (361)
Q Consensus       180 ~~~~g~~vlV~Gag~vG~~a~~la~~~g--~~vi~~~~~~~~~~~~~~---~~g~-----~-~vv~~~~~~~~~~~~~g~  248 (361)
                      .+++|++||-+|+|. |..++.+|+..|  .+|+.++..++-.+.+.+   +.+.     . ..+...+..........|
T Consensus        73 ~l~~g~~VLdiG~Gs-Gy~ta~la~l~~~~g~V~~ie~~~~l~~~a~~~l~~~~~~~~~~~~~~~~~gD~~~~~~~~~~f  151 (224)
T d1i1na_          73 QLHEGAKALDVGSGS-GILTACFARMVGCTGKVIGIDHIKELVDDSVNNVRKDDPTLLSSGRVQLVVGDGRMGYAEEAPY  151 (224)
T ss_dssp             TSCTTCEEEEETCTT-SHHHHHHHHHHCTTCEEEEEESCHHHHHHHHHHHHHHCTHHHHTSSEEEEESCGGGCCGGGCCE
T ss_pred             ccCCCCeEEEecCCC-CHHHHHHHHHhCCCceEEEEcCCHHHHHHHHHhccccCcccccccceEEEEeecccccchhhhh
Confidence            579999999999875 888888998865  389999888765444322   2221     1 111111111101112469


Q ss_pred             cEEEEcCCCcccHHHHHhccccCCEEEEe
Q 018067          249 DGIIDTVSAVHPLMPLIGLLKSQGKLVLV  277 (361)
Q Consensus       249 d~vid~~g~~~~~~~~~~~l~~~G~~v~~  277 (361)
                      |.|+-+..-.......++.|++||+++..
T Consensus       152 D~I~~~~~~~~ip~~l~~~LkpGG~LV~p  180 (224)
T d1i1na_         152 DAIHVGAAAPVVPQALIDQLKPGGRLILP  180 (224)
T ss_dssp             EEEEECSBBSSCCHHHHHTEEEEEEEEEE
T ss_pred             hhhhhhcchhhcCHHHHhhcCCCcEEEEE
Confidence            99998877777678899999999999874

>d1ja9a_ c.2.1.2 (A:) 1,3,6,8-tetrahydroxynaphthalene reductase {Rice blast fungus (Magnaporthe grisea) [TaxId: 148305]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Tyrosine-dependent oxidoreductases
domain: 1,3,6,8-tetrahydroxynaphthalene reductase
species: Rice blast fungus (Magnaporthe grisea) [TaxId: 148305]

Probab=97.33  E-value=0.0006  Score=57.59  Aligned_cols=98  Identities=20%  Similarity=0.219  Sum_probs=68.6

Q ss_pred             CCCCEEEEEcC-ChHHHHHHHHHHHcCCeEEEEeCCchh-HHHH---HHHcCCCE---EecCCCHHHHHH-------hcC
Q 018067          182 KPGMHVGVVGL-GGLGHVAVKFAKAMGVKVTVISTSPSK-KSEA---IERLGADS---FLVSRDQDEMQA-------AMG  246 (361)
Q Consensus       182 ~~g~~vlV~Ga-g~vG~~a~~la~~~g~~vi~~~~~~~~-~~~~---~~~~g~~~---vv~~~~~~~~~~-------~~~  246 (361)
                      -.|+++||.|+ +++|.+.++.+...|++|++..+.+++ .+.+   .++.|.+.   ..|..+++.++.       ..+
T Consensus         4 L~GK~alITGas~GIG~aia~~la~~G~~Vvi~~~~~~~~~~~~~~~~~~~g~~~~~~~~D~~~~~~v~~~~~~~~~~~g   83 (259)
T d1ja9a_           4 LAGKVALTTGAGRGIGRGIAIELGRRGASVVVNYGSSSKAAEEVVAELKKLGAQGVAIQADISKPSEVVALFDKAVSHFG   83 (259)
T ss_dssp             TTTCEEEETTTTSHHHHHHHHHHHHTTCEEEEEESSCHHHHHHHHHHHHHTTCCEEEEECCTTSHHHHHHHHHHHHHHHS
T ss_pred             CCCCEEEEeCCCCHHHHHHHHHHHHcCCEEEEEcCCChHHHHHHHHHHHHcCCCceEecCCCCCHHHHHHHHHHHHHHcC
Confidence            36899999987 999999999999999999987665543 3333   34456543   234455443332       225


Q ss_pred             CccEEEEcCCCcc-------------------------cHHHHHhccccCCEEEEecC
Q 018067          247 TMDGIIDTVSAVH-------------------------PLMPLIGLLKSQGKLVLVGA  279 (361)
Q Consensus       247 g~d~vid~~g~~~-------------------------~~~~~~~~l~~~G~~v~~g~  279 (361)
                      +.|++++++|...                         ..+.++..++++|+++.+..
T Consensus        84 ~idilinnag~~~~~~~~~~~~~~~~~~~~~n~~~~~~~~~~~~~~m~~~g~~iii~s  141 (259)
T d1ja9a_          84 GLDFVMSNSGMEVWCDELEVTQELFDKVFNLNTRGQFFVAQQGLKHCRRGGRIILTSS  141 (259)
T ss_dssp             CEEEEECCCCCCCCCCGGGCCHHHHHHHHHHHTHHHHHHHHHHHHHEEEEEEEEEECC
T ss_pred             CCcEEEeccccccccccccchHHHHHHHHhhccceeeeehhhhhhhhhcCCccccccc
Confidence            7999999998631                         34556777888888888764

>d1g0oa_ c.2.1.2 (A:) 1,3,8-trihydroxynaphtalene reductase (THNR, naphtol reductase) {Rice blast fungus (Magnaporthe grisea) [TaxId: 148305]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Tyrosine-dependent oxidoreductases
domain: 1,3,8-trihydroxynaphtalene reductase (THNR, naphtol reductase)
species: Rice blast fungus (Magnaporthe grisea) [TaxId: 148305]

Probab=97.32  E-value=0.0012  Score=56.04  Aligned_cols=98  Identities=21%  Similarity=0.266  Sum_probs=69.2

Q ss_pred             CCCEEEEEcC-ChHHHHHHHHHHHcCCeEEEEeCCchh-HHHH---HHHcCCCEE---ecCCCHHHHHHh-------cCC
Q 018067          183 PGMHVGVVGL-GGLGHVAVKFAKAMGVKVTVISTSPSK-KSEA---IERLGADSF---LVSRDQDEMQAA-------MGT  247 (361)
Q Consensus       183 ~g~~vlV~Ga-g~vG~~a~~la~~~g~~vi~~~~~~~~-~~~~---~~~~g~~~v---v~~~~~~~~~~~-------~~g  247 (361)
                      +|+++||.|+ +++|.++++.+...|++|++++++.++ .+.+   .++.|.+..   .|..+++.+..+       .++
T Consensus        17 ~gK~~lITGas~GIG~aia~~la~~Ga~Vvi~~~~~~~~~~~~~~~~~~~g~~~~~~~~D~~~~~~v~~~~~~~~~~~g~   96 (272)
T d1g0oa_          17 EGKVALVTGAGRGIGREMAMELGRRGCKVIVNYANSTESAEEVVAAIKKNGSDAACVKANVGVVEDIVRMFEEAVKIFGK   96 (272)
T ss_dssp             TTCEEEETTTTSHHHHHHHHHHHHTTCEEEEEESSCHHHHHHHHHHHHHTTCCEEEEECCTTCHHHHHHHHHHHHHHHSC
T ss_pred             CCCEEEEeCCCCHHHHHHHHHHHHcCCEEEEEeCCchHHHHHHHHHHHhhCCceeeEeCCCCCHHHHHHHHHHHHHHhCC
Confidence            5899999997 999999999999999999998877543 2222   244555432   244555433322       257


Q ss_pred             ccEEEEcCCCcc-------------------------cHHHHHhccccCCEEEEecCC
Q 018067          248 MDGIIDTVSAVH-------------------------PLMPLIGLLKSQGKLVLVGAP  280 (361)
Q Consensus       248 ~d~vid~~g~~~-------------------------~~~~~~~~l~~~G~~v~~g~~  280 (361)
                      .|++++++|...                         ..+.+...|.++|+++.++..
T Consensus        97 idilV~nag~~~~~~~~~~~~~~~~~~~~~nl~~~~~~~~~~~~~m~~~g~~i~i~s~  154 (272)
T d1g0oa_          97 LDIVCSNSGVVSFGHVKDVTPEEFDRVFTINTRGQFFVAREAYKHLEIGGRLILMGSI  154 (272)
T ss_dssp             CCEEEECCCCCCCCCGGGCCHHHHHHHHHHHTHHHHHHHHHHHHHSCTTCEEEEECCG
T ss_pred             CCccccccccchhhhhhhhhhhHHHHHhhhccceeeeecccccccccccccccccccc
Confidence            999999988531                         345567788889999988753

>d1ae1a_ c.2.1.2 (A:) Tropinone reductase {Jimsonweed (Datura stramonium), I [TaxId: 4076]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Tyrosine-dependent oxidoreductases
domain: Tropinone reductase
species: Jimsonweed (Datura stramonium), I [TaxId: 4076]

Probab=97.31  E-value=0.00044  Score=58.46  Aligned_cols=76  Identities=20%  Similarity=0.277  Sum_probs=56.8

Q ss_pred             CCCEEEEEcC-ChHHHHHHHHHHHcCCeEEEEeCCchhHHHHHHHc---CCCE---EecCCCHHHHHHh-------c-CC
Q 018067          183 PGMHVGVVGL-GGLGHVAVKFAKAMGVKVTVISTSPSKKSEAIERL---GADS---FLVSRDQDEMQAA-------M-GT  247 (361)
Q Consensus       183 ~g~~vlV~Ga-g~vG~~a~~la~~~g~~vi~~~~~~~~~~~~~~~~---g~~~---vv~~~~~~~~~~~-------~-~g  247 (361)
                      +|+++||.|+ +++|.++++.+...|++|+++++++++.+++.+++   +...   ..|-.+.+.++++       . +.
T Consensus         5 ~gK~alITGas~GIG~aia~~la~~G~~V~i~~r~~~~l~~~~~~~~~~~~~~~~~~~D~s~~~~~~~~~~~~~~~~~g~   84 (258)
T d1ae1a_           5 KGTTALVTGGSKGIGYAIVEELAGLGARVYTCSRNEKELDECLEIWREKGLNVEGSVCDLLSRTERDKLMQTVAHVFDGK   84 (258)
T ss_dssp             TTCEEEEESCSSHHHHHHHHHHHHTTCEEEEEESCHHHHHHHHHHHHHTTCCEEEEECCTTCHHHHHHHHHHHHHHTTSC
T ss_pred             CCCEEEEeCCCCHHHHHHHHHHHHCCCEEEEEECCHHHHHHHHHHHHhcCCCceEEEeecCCHHHHHHHHHHHHHHhCCC
Confidence            6899999997 99999999999999999999999987766654443   4332   2355565543332       2 35


Q ss_pred             ccEEEEcCCCc
Q 018067          248 MDGIIDTVSAV  258 (361)
Q Consensus       248 ~d~vid~~g~~  258 (361)
                      .|++++++|..
T Consensus        85 idilinnag~~   95 (258)
T d1ae1a_          85 LNILVNNAGVV   95 (258)
T ss_dssp             CCEEEECCCCC
T ss_pred             cEEEecccccc
Confidence            89999999863

>d1h5qa_ c.2.1.2 (A:) Mannitol dehydrogenase {Mushroom (Agaricus bisporus) [TaxId: 5341]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Tyrosine-dependent oxidoreductases
domain: Mannitol dehydrogenase
species: Mushroom (Agaricus bisporus) [TaxId: 5341]

Probab=97.29  E-value=0.00049  Score=58.16  Aligned_cols=75  Identities=23%  Similarity=0.337  Sum_probs=56.5

Q ss_pred             CCCEEEEEcC-ChHHHHHHHHHHHcCCeEEEEeCCchhHHHHHH----HcCCCE---EecCCCHHHHHHh-------cCC
Q 018067          183 PGMHVGVVGL-GGLGHVAVKFAKAMGVKVTVISTSPSKKSEAIE----RLGADS---FLVSRDQDEMQAA-------MGT  247 (361)
Q Consensus       183 ~g~~vlV~Ga-g~vG~~a~~la~~~g~~vi~~~~~~~~~~~~~~----~~g~~~---vv~~~~~~~~~~~-------~~g  247 (361)
                      +|+++||.|+ +++|.++++.+...|++|++++++.++..++.+    +.|.+.   ..|-.+++.+.++       .++
T Consensus         8 ~gK~alITGas~GIG~aia~~la~~Ga~V~i~~r~~~~~~~~~~~~~~~~g~~~~~~~~Dv~~~~~v~~~~~~~~~~~g~   87 (260)
T d1h5qa_           8 VNKTIIVTGGNRGIGLAFTRAVAAAGANVAVIYRSAADAVEVTEKVGKEFGVKTKAYQCDVSNTDIVTKTIQQIDADLGP   87 (260)
T ss_dssp             TTEEEEEETTTSHHHHHHHHHHHHTTEEEEEEESSCTTHHHHHHHHHHHHTCCEEEEECCTTCHHHHHHHHHHHHHHSCS
T ss_pred             CCCEEEEeCCCCHHHHHHHHHHHHCCCEEEEEECCHHHHHHHHHHHHHHhCCceEEEEccCCCHHHHHHHHHHHHHHhCC
Confidence            5889999997 999999999999999999999999877655443    445432   3355565544332       257


Q ss_pred             ccEEEEcCCC
Q 018067          248 MDGIIDTVSA  257 (361)
Q Consensus       248 ~d~vid~~g~  257 (361)
                      +|++++++|.
T Consensus        88 iDilVnnAg~   97 (260)
T d1h5qa_          88 ISGLIANAGV   97 (260)
T ss_dssp             EEEEEECCCC
T ss_pred             CcEecccccc
Confidence            9999999985

>d1spxa_ c.2.1.2 (A:) Glucose dehydrogenase (5l265) {Nematode (Caenorhabditis elegans) [TaxId: 6239]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Tyrosine-dependent oxidoreductases
domain: Glucose dehydrogenase (5l265)
species: Nematode (Caenorhabditis elegans) [TaxId: 6239]

Probab=97.28  E-value=0.00035  Score=59.27  Aligned_cols=75  Identities=16%  Similarity=0.286  Sum_probs=56.0

Q ss_pred             CCCEEEEEcC-ChHHHHHHHHHHHcCCeEEEEeCCchhHHHHHHHc---CC---C---EEecCCCHHHHHHh-------c
Q 018067          183 PGMHVGVVGL-GGLGHVAVKFAKAMGVKVTVISTSPSKKSEAIERL---GA---D---SFLVSRDQDEMQAA-------M  245 (361)
Q Consensus       183 ~g~~vlV~Ga-g~vG~~a~~la~~~g~~vi~~~~~~~~~~~~~~~~---g~---~---~vv~~~~~~~~~~~-------~  245 (361)
                      +|+++||.|+ +++|.++++.+...|++|+++++++++.+++.+++   +.   .   ...|-.+++.++++       .
T Consensus         4 ~gKvalVTGas~GIG~aia~~la~~Ga~V~~~~r~~~~l~~~~~~l~~~~~~~~~~~~~~~Dvt~~~~v~~~~~~~~~~~   83 (264)
T d1spxa_           4 AEKVAIITGSSNGIGRATAVLFAREGAKVTITGRHAERLEETRQQILAAGVSEQNVNSVVADVTTDAGQDEILSTTLGKF   83 (264)
T ss_dssp             TTCEEEETTTTSHHHHHHHHHHHHTTCEEEEEESCHHHHHHHHHHHHHTTCCGGGEEEEECCTTSHHHHHHHHHHHHHHH
T ss_pred             CCCEEEEeCcCCHHHHHHHHHHHHCCCEEEEEECCHHHHHHHHHHHHhcCCCcCceEEEEccCCCHHHHHHHHHHHHHHh
Confidence            6888999987 99999999999999999999999988877765543   21   1   12355555544432       2


Q ss_pred             CCccEEEEcCCC
Q 018067          246 GTMDGIIDTVSA  257 (361)
Q Consensus       246 ~g~d~vid~~g~  257 (361)
                      ++.|++++++|.
T Consensus        84 g~iDilvnnAG~   95 (264)
T d1spxa_          84 GKLDILVNNAGA   95 (264)
T ss_dssp             SCCCEEEECCC-
T ss_pred             CCCCEeeccccc
Confidence            589999999884

>d1fmca_ c.2.1.2 (A:) 7-alpha-hydroxysteroid dehydrogenase {Escherichia coli [TaxId: 562]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Tyrosine-dependent oxidoreductases
domain: 7-alpha-hydroxysteroid dehydrogenase
species: Escherichia coli [TaxId: 562]

Probab=97.28  E-value=0.00028  Score=59.63  Aligned_cols=75  Identities=16%  Similarity=0.308  Sum_probs=56.7

Q ss_pred             CCCEEEEEcC-ChHHHHHHHHHHHcCCeEEEEeCCchhHHHHHHHc---CCCE---EecCCCHHHHHHh-------cCCc
Q 018067          183 PGMHVGVVGL-GGLGHVAVKFAKAMGVKVTVISTSPSKKSEAIERL---GADS---FLVSRDQDEMQAA-------MGTM  248 (361)
Q Consensus       183 ~g~~vlV~Ga-g~vG~~a~~la~~~g~~vi~~~~~~~~~~~~~~~~---g~~~---vv~~~~~~~~~~~-------~~g~  248 (361)
                      +|+++||.|+ +++|.++++.+...|++|+++++++++.+++.+++   |.+.   ..|-.+++.++++       .+++
T Consensus        10 ~gK~alITGas~GIG~aia~~la~~Ga~V~~~~r~~~~~~~~~~~l~~~g~~~~~~~~Dvs~~~~~~~~~~~~~~~~g~i   89 (255)
T d1fmca_          10 DGKCAIITGAGAGIGKEIAITFATAGASVVVSDINADAANHVVDEIQQLGGQAFACRCDITSEQELSALADFAISKLGKV   89 (255)
T ss_dssp             TTCEEEETTTTSHHHHHHHHHHHTTTCEEEEEESCHHHHHHHHHHHHHTTCCEEEEECCTTCHHHHHHHHHHHHHHHSSC
T ss_pred             CCCEEEEeCCCcHHHHHHHHHHHHCCCEEEEEECCHHHHHHHHHHHHHcCCcEEEEEccCCCHHHHHHHHHHHHHHcCCC
Confidence            7899999987 99999999999999999999999988766665443   4432   2344555443332       2579


Q ss_pred             cEEEEcCCC
Q 018067          249 DGIIDTVSA  257 (361)
Q Consensus       249 d~vid~~g~  257 (361)
                      |++++++|.
T Consensus        90 DilvnnAG~   98 (255)
T d1fmca_          90 DILVNNAGG   98 (255)
T ss_dssp             CEEEECCCC
T ss_pred             CEeeeCCcC
Confidence            999999985

>d1vbfa_ c.66.1.7 (A:) Protein-L-isoaspartyl O-methyltransferase {Sulfolobus tokodaii [TaxId: 111955]}

class: Alpha and beta proteins (a/b)
fold: S-adenosyl-L-methionine-dependent methyltransferases
superfamily: S-adenosyl-L-methionine-dependent methyltransferases
family: Protein-L-isoaspartyl O-methyltransferase
domain: Protein-L-isoaspartyl O-methyltransferase
species: Sulfolobus tokodaii [TaxId: 111955]

Probab=97.26  E-value=0.00055  Score=56.36  Aligned_cols=98  Identities=19%  Similarity=0.083  Sum_probs=65.6

Q ss_pred             cCCCCCCCEEEEEcCChHHHHHHHHHHHcCCeEEEEeCCchhHHHHHHHcCC--CEEecCCCHHHHHHhcCCccEEEEcC
Q 018067          178 YGLDKPGMHVGVVGLGGLGHVAVKFAKAMGVKVTVISTSPSKKSEAIERLGA--DSFLVSRDQDEMQAAMGTMDGIIDTV  255 (361)
Q Consensus       178 ~~~~~~g~~vlV~Gag~vG~~a~~la~~~g~~vi~~~~~~~~~~~~~~~~g~--~~vv~~~~~~~~~~~~~g~d~vid~~  255 (361)
                      ...+++|++||-+|+| .|..++.+++. +.+|+.++.+++....+.+.+..  +..+...+........+.||.|+-+.
T Consensus        65 ~L~l~~g~~VLdIG~G-sGy~ta~La~l-~~~V~aiE~~~~~~~~A~~~~~~~~nv~~~~~d~~~g~~~~~pfD~Iiv~~  142 (224)
T d1vbfa_          65 ELDLHKGQKVLEIGTG-IGYYTALIAEI-VDKVVSVEINEKMYNYASKLLSYYNNIKLILGDGTLGYEEEKPYDRVVVWA  142 (224)
T ss_dssp             HTTCCTTCEEEEECCT-TSHHHHHHHHH-SSEEEEEESCHHHHHHHHHHHTTCSSEEEEESCGGGCCGGGCCEEEEEESS
T ss_pred             HhhhcccceEEEecCC-CCHHHHHHHHH-hcccccccccHHHHHHHHHHHhcccccccccCchhhcchhhhhHHHHHhhc
Confidence            4458999999999987 37777777775 56899998887665554333332  11111122111001124699998777


Q ss_pred             CCcccHHHHHhccccCCEEEEe
Q 018067          256 SAVHPLMPLIGLLKSQGKLVLV  277 (361)
Q Consensus       256 g~~~~~~~~~~~l~~~G~~v~~  277 (361)
                      +.+......++.|++||+++..
T Consensus       143 a~~~ip~~l~~qLk~GGrLV~p  164 (224)
T d1vbfa_         143 TAPTLLCKPYEQLKEGGIMILP  164 (224)
T ss_dssp             BBSSCCHHHHHTEEEEEEEEEE
T ss_pred             chhhhhHHHHHhcCCCCEEEEE
Confidence            7677677889999999999885

>d2rhca1 c.2.1.2 (A:5-261) beta-keto acyl carrier protein reductase {Streptomyces coelicolor [TaxId: 1902]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Tyrosine-dependent oxidoreductases
domain: beta-keto acyl carrier protein reductase
species: Streptomyces coelicolor [TaxId: 1902]

Probab=97.25  E-value=0.00048  Score=58.16  Aligned_cols=74  Identities=19%  Similarity=0.279  Sum_probs=55.6

Q ss_pred             CCEEEEEcC-ChHHHHHHHHHHHcCCeEEEEeCCchhHHHHHHHc---CCCE---EecCCCHHHHHHh-------cCCcc
Q 018067          184 GMHVGVVGL-GGLGHVAVKFAKAMGVKVTVISTSPSKKSEAIERL---GADS---FLVSRDQDEMQAA-------MGTMD  249 (361)
Q Consensus       184 g~~vlV~Ga-g~vG~~a~~la~~~g~~vi~~~~~~~~~~~~~~~~---g~~~---vv~~~~~~~~~~~-------~~g~d  249 (361)
                      |+.+||.|+ +++|.+++..+...|++|+++++++++.+++.+++   |.+.   ..|-.+++.++.+       .++.|
T Consensus         2 gKValITGas~GIG~aia~~la~~Ga~V~i~~r~~~~l~~~~~~l~~~g~~~~~~~~Dvs~~~~v~~~~~~~~~~~g~iD   81 (257)
T d2rhca1           2 SEVALVTGATSGIGLEIARRLGKEGLRVFVCARGEEGLRTTLKELREAGVEADGRTCDVRSVPEIEALVAAVVERYGPVD   81 (257)
T ss_dssp             CCEEEEESCSSHHHHHHHHHHHHTTCEEEEEESCHHHHHHHHHHHHHTTCCEEEEECCTTCHHHHHHHHHHHHHHTCSCS
T ss_pred             CCEEEEeCCCCHHHHHHHHHHHHCCCEEEEEECCHHHHHHHHHHHHhcCCcEEEEEeecCCHHHHHHHHHHHHHHhCCCC
Confidence            677899997 99999999999999999999999988776665543   4432   2355555444332       25799


Q ss_pred             EEEEcCCC
Q 018067          250 GIIDTVSA  257 (361)
Q Consensus       250 ~vid~~g~  257 (361)
                      ++|+++|.
T Consensus        82 ilVnnAG~   89 (257)
T d2rhca1          82 VLVNNAGR   89 (257)
T ss_dssp             EEEECCCC
T ss_pred             EEEecccc
Confidence            99999985

>d1uzma1 c.2.1.2 (A:9-245) beta-keto acyl carrier protein reductase {Mycobacterium tuberculosis [TaxId: 1773]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Tyrosine-dependent oxidoreductases
domain: beta-keto acyl carrier protein reductase
species: Mycobacterium tuberculosis [TaxId: 1773]

Probab=97.25  E-value=0.00039  Score=57.97  Aligned_cols=70  Identities=20%  Similarity=0.191  Sum_probs=52.6

Q ss_pred             CCCEEEEEcC-ChHHHHHHHHHHHcCCeEEEEeCCchhHHHHHHHcCCCEEecCCCHHHHHHh-------cCCccEEEEc
Q 018067          183 PGMHVGVVGL-GGLGHVAVKFAKAMGVKVTVISTSPSKKSEAIERLGADSFLVSRDQDEMQAA-------MGTMDGIIDT  254 (361)
Q Consensus       183 ~g~~vlV~Ga-g~vG~~a~~la~~~g~~vi~~~~~~~~~~~~~~~~g~~~vv~~~~~~~~~~~-------~~g~d~vid~  254 (361)
                      .|+++||.|+ +++|.++++.+...|++|++++++++....+     .....|..+++.++++       .++.|+++++
T Consensus         6 ~gK~~lITGas~GIG~aia~~la~~Ga~V~~~~r~~~~~~~~-----~~~~~Dv~~~~~v~~~~~~~~~~~g~iDiLVnn   80 (237)
T d1uzma1           6 VSRSVLVTGGNRGIGLAIAQRLAADGHKVAVTHRGSGAPKGL-----FGVEVDVTDSDAVDRAFTAVEEHQGPVEVLVSN   80 (237)
T ss_dssp             CCCEEEETTTTSHHHHHHHHHHHHTTCEEEEEESSSCCCTTS-----EEEECCTTCHHHHHHHHHHHHHHHSSCSEEEEE
T ss_pred             CCCEEEEeCCCCHHHHHHHHHHHHCCCEEEEEECCcchhcCc-----eEEEEecCCHHHHHHHHHHHHHhcCCceEEEee
Confidence            6899999997 9999999999999999999999987654322     1123455665544332       2579999999


Q ss_pred             CCC
Q 018067          255 VSA  257 (361)
Q Consensus       255 ~g~  257 (361)
                      +|.
T Consensus        81 AG~   83 (237)
T d1uzma1          81 AGL   83 (237)
T ss_dssp             CSC
T ss_pred             ecc
Confidence            985

>d1hdoa_ c.2.1.2 (A:) Biliverdin IX beta reductase {Human (Homo sapiens) [TaxId: 9606]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Tyrosine-dependent oxidoreductases
domain: Biliverdin IX beta reductase
species: Human (Homo sapiens) [TaxId: 9606]

Probab=97.24  E-value=0.00031  Score=57.10  Aligned_cols=95  Identities=16%  Similarity=0.196  Sum_probs=66.9

Q ss_pred             CCEEEEEcC-ChHHHHHHHHHHHcCCeEEEEeCCchhHHHHHHHcCCCEE-ecCCCHHHHHHhcCCccEEEEcCCCcc--
Q 018067          184 GMHVGVVGL-GGLGHVAVKFAKAMGVKVTVISTSPSKKSEAIERLGADSF-LVSRDQDEMQAAMGTMDGIIDTVSAVH--  259 (361)
Q Consensus       184 g~~vlV~Ga-g~vG~~a~~la~~~g~~vi~~~~~~~~~~~~~~~~g~~~v-v~~~~~~~~~~~~~g~d~vid~~g~~~--  259 (361)
                      .++|+|+|+ |.+|..++..+...|.+|++++++.++.... ...+++.+ .|..+.+.+.+...++|+||.++|...  
T Consensus         3 ~kkIlV~GatG~iG~~v~~~Ll~~g~~V~~~~R~~~~~~~~-~~~~~~~~~gD~~d~~~l~~al~~~d~vi~~~g~~~~~   81 (205)
T d1hdoa_           3 VKKIAIFGATGQTGLTTLAQAVQAGYEVTVLVRDSSRLPSE-GPRPAHVVVGDVLQAADVDKTVAGQDAVIVLLGTRNDL   81 (205)
T ss_dssp             CCEEEEESTTSHHHHHHHHHHHHTTCEEEEEESCGGGSCSS-SCCCSEEEESCTTSHHHHHHHHTTCSEEEECCCCTTCC
T ss_pred             CCEEEEECCCCHHHHHHHHHHHHCcCEEEEEEcChhhcccc-cccccccccccccchhhHHHHhcCCCEEEEEeccCCch
Confidence            468999998 9999999998888999999999988765333 22234322 255667777777789999999998531  


Q ss_pred             --------cHHHHHhccccC--CEEEEecC
Q 018067          260 --------PLMPLIGLLKSQ--GKLVLVGA  279 (361)
Q Consensus       260 --------~~~~~~~~l~~~--G~~v~~g~  279 (361)
                              .....++.++..  .+++.++.
T Consensus        82 ~~~~~~~~~~~~l~~aa~~~~v~r~i~~ss  111 (205)
T d1hdoa_          82 SPTTVMSEGARNIVAAMKAHGVDKVVACTS  111 (205)
T ss_dssp             SCCCHHHHHHHHHHHHHHHHTCCEEEEECC
T ss_pred             hhhhhhHHHHHHHHHHHHhcCCCeEEEEee
Confidence                    122344444443  37888764

>d1w6ua_ c.2.1.2 (A:) 2,4-dienoyl-CoA reductase, mitochondrial (DECR) {Human (Homo sapiens), [TaxId: 9606]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Tyrosine-dependent oxidoreductases
domain: 2,4-dienoyl-CoA reductase, mitochondrial (DECR)
species: Human (Homo sapiens), [TaxId: 9606]

Probab=97.24  E-value=0.00048  Score=59.30  Aligned_cols=76  Identities=20%  Similarity=0.243  Sum_probs=56.5

Q ss_pred             CCCCEEEEEcC-ChHHHHHHHHHHHcCCeEEEEeCCchhHHHHHHH----cCCCE-E--ecCCCHHHHHHh-------cC
Q 018067          182 KPGMHVGVVGL-GGLGHVAVKFAKAMGVKVTVISTSPSKKSEAIER----LGADS-F--LVSRDQDEMQAA-------MG  246 (361)
Q Consensus       182 ~~g~~vlV~Ga-g~vG~~a~~la~~~g~~vi~~~~~~~~~~~~~~~----~g~~~-v--v~~~~~~~~~~~-------~~  246 (361)
                      -+|+++||.|+ +++|.+++..+...|++|++++++.++..++.++    .|... .  .|..+++.+...       .+
T Consensus        23 l~gK~alITGas~GIG~aiA~~la~~Ga~Vii~~r~~~~l~~~~~~l~~~~g~~~~~~~~D~~~~~~v~~~~~~~~~~~g  102 (294)
T d1w6ua_          23 FQGKVAFITGGGTGLGKGMTTLLSSLGAQCVIASRKMDVLKATAEQISSQTGNKVHAIQCDVRDPDMVQNTVSELIKVAG  102 (294)
T ss_dssp             TTTCEEEEETTTSHHHHHHHHHHHHTTCEEEEEESCHHHHHHHHHHHHHHHSSCEEEEECCTTCHHHHHHHHHHHHHHTC
T ss_pred             CCCCEEEEeCCCCHHHHHHHHHHHHcCCEEEEEECCHHHHHHHHHHHHHhcCCceEEEEecccChHHHHHHhhhhhhhcc
Confidence            36899999997 9999999999999999999999998776555443    34432 2  344555443332       25


Q ss_pred             CccEEEEcCCC
Q 018067          247 TMDGIIDTVSA  257 (361)
Q Consensus       247 g~d~vid~~g~  257 (361)
                      ++|++++++|.
T Consensus       103 ~iDilvnnAg~  113 (294)
T d1w6ua_         103 HPNIVINNAAG  113 (294)
T ss_dssp             SCSEEEECCCC
T ss_pred             ccchhhhhhhh
Confidence            79999999985

>d1xhla_ c.2.1.2 (A:) Hypothetical protein F25D1.5 {Caenorhabditis elegans [TaxId: 6239]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Tyrosine-dependent oxidoreductases
domain: Hypothetical protein F25D1.5
species: Caenorhabditis elegans [TaxId: 6239]

Probab=97.24  E-value=0.00039  Score=59.32  Aligned_cols=75  Identities=19%  Similarity=0.348  Sum_probs=56.3

Q ss_pred             CCCEEEEEcC-ChHHHHHHHHHHHcCCeEEEEeCCchhHHHHHHHc---CC--C----EEecCCCHHHHHHh-------c
Q 018067          183 PGMHVGVVGL-GGLGHVAVKFAKAMGVKVTVISTSPSKKSEAIERL---GA--D----SFLVSRDQDEMQAA-------M  245 (361)
Q Consensus       183 ~g~~vlV~Ga-g~vG~~a~~la~~~g~~vi~~~~~~~~~~~~~~~~---g~--~----~vv~~~~~~~~~~~-------~  245 (361)
                      +|+++||.|+ ++||.++++.+...|++|+++++++++.+++.+++   |.  .    ...|-.+++.++++       .
T Consensus         3 ~gK~alITGas~GIG~aia~~la~~Ga~V~~~~r~~~~l~~~~~~i~~~~~~~~~~~~~~~Dv~~~~~v~~~~~~~~~~~   82 (274)
T d1xhla_           3 SGKSVIITGSSNGIGRSAAVIFAKEGAQVTITGRNEDRLEETKQQILKAGVPAEKINAVVADVTEASGQDDIINTTLAKF   82 (274)
T ss_dssp             TTCEEEETTCSSHHHHHHHHHHHHTTCEEEEEESCHHHHHHHHHHHHHTTCCGGGEEEEECCTTSHHHHHHHHHHHHHHH
T ss_pred             CCCEEEEeCCCcHHHHHHHHHHHHCCCEEEEEECCHHHHHHHHHHHHHcCCCCcceEEEEeeCCCHHHHHHHHHHHHHHc
Confidence            6899999987 99999999999999999999999988776665543   32  1    12355565544332       2


Q ss_pred             CCccEEEEcCCC
Q 018067          246 GTMDGIIDTVSA  257 (361)
Q Consensus       246 ~g~d~vid~~g~  257 (361)
                      +++|++++++|.
T Consensus        83 G~iDilVnnAG~   94 (274)
T d1xhla_          83 GKIDILVNNAGA   94 (274)
T ss_dssp             SCCCEEEECCCC
T ss_pred             CCceEEEeeccc
Confidence            579999999884

>d1ulua_ c.2.1.2 (A:) Enoyl-ACP reductase {Thermus thermophilus [TaxId: 274]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Tyrosine-dependent oxidoreductases
domain: Enoyl-ACP reductase
species: Thermus thermophilus [TaxId: 274]

Probab=97.20  E-value=0.00078  Score=56.68  Aligned_cols=98  Identities=21%  Similarity=0.289  Sum_probs=65.5

Q ss_pred             CCCEEEEEcC-C--hHHHHHHHHHHHcCCeEEEEeCCchhHHHH---HHHcCCCEE--ecCCCHHHHHHh-------cCC
Q 018067          183 PGMHVGVVGL-G--GLGHVAVKFAKAMGVKVTVISTSPSKKSEA---IERLGADSF--LVSRDQDEMQAA-------MGT  247 (361)
Q Consensus       183 ~g~~vlV~Ga-g--~vG~~a~~la~~~g~~vi~~~~~~~~~~~~---~~~~g~~~v--v~~~~~~~~~~~-------~~g  247 (361)
                      +|+++||.|+ |  ++|.++++.+...|++|++..++++.....   .+..+....  .|..+++.++++       .++
T Consensus         7 ~gK~alITGas~~~GIG~aiA~~la~~Ga~V~i~~~~~~~~~~~~~~~~~~~~~~~~~~D~~~~~~v~~~~~~~~~~~g~   86 (256)
T d1ulua_           7 SGKKALVMGVTNQRSLGFAIAAKLKEAGAEVALSYQAERLRPEAEKLAEALGGALLFRADVTQDEELDALFAGVKEAFGG   86 (256)
T ss_dssp             TTCEEEEESCCCSSSHHHHHHHHHHHTTCEEEEEESSGGGHHHHHHHHHHTTCCEEEECCTTCHHHHHHHHHHHHHHHSS
T ss_pred             CCCEEEEECCCCCchHHHHHHHHHHHCCCEEEEEeCcHHHHHHHHHhhhccCcccccccccCCHHHHHHHHHHHHHhcCC
Confidence            6899999997 5  799999999999999999888876543332   233333222  244555433332       257


Q ss_pred             ccEEEEcCCCcc-----------------------------cHHHHHhccccCCEEEEecCC
Q 018067          248 MDGIIDTVSAVH-----------------------------PLMPLIGLLKSQGKLVLVGAP  280 (361)
Q Consensus       248 ~d~vid~~g~~~-----------------------------~~~~~~~~l~~~G~~v~~g~~  280 (361)
                      .|+.++++|...                             ..+.+...++++|+++.++..
T Consensus        87 iDilVnnag~~~~~~~~~~~~~~~~~~~~~~~~vn~~~~~~~~~~~~~~~~~~G~Iv~isS~  148 (256)
T d1ulua_          87 LDYLVHAIAFAPREAMEGRYIDTRRQDWLLALEVSAYSLVAVARRAEPLLREGGGIVTLTYY  148 (256)
T ss_dssp             EEEEEECCCCCCHHHHSSCGGGCCHHHHHHHHHHHTHHHHHHHHHHTTTEEEEEEEEEEECG
T ss_pred             ceEEEeccccccccccccchhhhhhhhhhHhhhhhHHHHHHHHHHHHHHhccCCEEEEEeeh
Confidence            999999987421                             112234466778999998764

>d1sbya1 c.2.1.2 (A:1-254) Drosophila alcohol dehydrogenase {Fly (Drosophila lebanonensis) [TaxId: 7225]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Tyrosine-dependent oxidoreductases
domain: Drosophila alcohol dehydrogenase
species: Fly (Drosophila lebanonensis) [TaxId: 7225]

Probab=97.19  E-value=0.00085  Score=56.44  Aligned_cols=98  Identities=13%  Similarity=0.095  Sum_probs=64.2

Q ss_pred             CCCEEEEEcC-ChHHHHHHHHHHHcCCeEEEEeCCchhHHHHH---HHcCCC----EEecCC-CHHHHHH-------hcC
Q 018067          183 PGMHVGVVGL-GGLGHVAVKFAKAMGVKVTVISTSPSKKSEAI---ERLGAD----SFLVSR-DQDEMQA-------AMG  246 (361)
Q Consensus       183 ~g~~vlV~Ga-g~vG~~a~~la~~~g~~vi~~~~~~~~~~~~~---~~~g~~----~vv~~~-~~~~~~~-------~~~  246 (361)
                      +|++|||.|+ +++|.+++..+-..|++|+++++..++...+.   +..+-.    ...|.. +.+.+++       ..+
T Consensus         4 ~gK~vlITGgs~GIG~~~A~~la~~G~~vii~~r~~~~~~~~~~~~~~~~~~~~~~~~~d~~~~~~~~~~~~~~~~~~~g   83 (254)
T d1sbya1           4 TNKNVIFVAALGGIGLDTSRELVKRNLKNFVILDRVENPTALAELKAINPKVNITFHTYDVTVPVAESKKLLKKIFDQLK   83 (254)
T ss_dssp             TTCEEEEETTTSHHHHHHHHHHHHTCCSEEEEEESSCCHHHHHHHHHHCTTSEEEEEECCTTSCHHHHHHHHHHHHHHHS
T ss_pred             CCCEEEEecCCCHHHHHHHHHHHHCCCEEEEEECCcccHHHHHHHHhhCCCCCEEEEEeecCCCHHHHHHHHHHHHHHcC
Confidence            5899999997 99999999999999999999988776544442   223321    122332 3222222       225


Q ss_pred             CccEEEEcCCCcc-----------------cHHHHHhccc-----cCCEEEEecCC
Q 018067          247 TMDGIIDTVSAVH-----------------PLMPLIGLLK-----SQGKLVLVGAP  280 (361)
Q Consensus       247 g~d~vid~~g~~~-----------------~~~~~~~~l~-----~~G~~v~~g~~  280 (361)
                      ++|++++++|...                 ....++..+.     .+|+++.+++.
T Consensus        84 ~iDilvnnAG~~~~~~~~~~~~vNl~g~~~~~~~~~~~m~~~~~~~~g~Ii~isS~  139 (254)
T d1sbya1          84 TVDILINGAGILDDHQIERTIAINFTGLVNTTTAILDFWDKRKGGPGGIIANICSV  139 (254)
T ss_dssp             CCCEEEECCCCCCTTCHHHHHHHHTHHHHHHHHHHHHHHCGGGTCCCEEEEEECCG
T ss_pred             CCCEEEeCCCCCCHHHHHHHHHHHhHHHHHHHHHHHHHhhhcccCCCceEEEEech
Confidence            7999999999632                 2233444442     35899998764

>d1dhra_ c.2.1.2 (A:) Dihydropteridin reductase (pteridine reductase) {Rat (Rattus norvegicus) [TaxId: 10116]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Tyrosine-dependent oxidoreductases
domain: Dihydropteridin reductase (pteridine reductase)
species: Rat (Rattus norvegicus) [TaxId: 10116]

Probab=97.19  E-value=6.4e-05  Score=62.92  Aligned_cols=92  Identities=22%  Similarity=0.195  Sum_probs=61.2

Q ss_pred             CCCEEEEEcC-ChHHHHHHHHHHHcCCeEEEEeCCchhHHHHHHHcCCCEEecCC--CHHH-------HHHhc--CCccE
Q 018067          183 PGMHVGVVGL-GGLGHVAVKFAKAMGVKVTVISTSPSKKSEAIERLGADSFLVSR--DQDE-------MQAAM--GTMDG  250 (361)
Q Consensus       183 ~g~~vlV~Ga-g~vG~~a~~la~~~g~~vi~~~~~~~~~~~~~~~~g~~~vv~~~--~~~~-------~~~~~--~g~d~  250 (361)
                      +|++|||.|+ +++|.+.++.+...|++|+.++..+.+..      .....+...  ..+.       +.+..  +++|+
T Consensus         1 egK~vlITGas~GIG~a~a~~l~~~G~~V~~~~~~~~~~~------~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~iD~   74 (236)
T d1dhra_           1 EARRVLVYGGRGALGSRCVQAFRARNWWVASIDVVENEEA------SASVIVKMTDSFTEQADQVTAEVGKLLGDQKVDA   74 (236)
T ss_dssp             CCCEEEEETTTSHHHHHHHHHHHTTTCEEEEEESSCCTTS------SEEEECCCCSCHHHHHHHHHHHHHHHHTTCCEEE
T ss_pred             CCCEEEEECCCCHHHHHHHHHHHHCCCEEEEEeCCccccc------cccceeecccCcHHHHHHHHHHHHHHhCCCCceE
Confidence            4889999998 99999999999999999999887654311      111111111  1111       11111  25999


Q ss_pred             EEEcCCCc--------------------------ccHHHHHhccccCCEEEEecCC
Q 018067          251 IIDTVSAV--------------------------HPLMPLIGLLKSQGKLVLVGAP  280 (361)
Q Consensus       251 vid~~g~~--------------------------~~~~~~~~~l~~~G~~v~~g~~  280 (361)
                      +|+++|..                          .....++..++++|+++.+++.
T Consensus        75 lInnAG~~~~~~~~~~~~~~~~~~~~~~n~~~~~~~~~~~~~~m~~~G~Iv~isS~  130 (236)
T d1dhra_          75 ILCVAGGWAGGNAKSKSLFKNCDLMWKQSIWTSTISSHLATKHLKEGGLLTLAGAK  130 (236)
T ss_dssp             EEECCCCCCCBCTTCTTHHHHHHHHHHHHHHHHHHHHHHHHHHEEEEEEEEEECCG
T ss_pred             EEECCcccccccchhcCCHHHHHHHHHHcchHHHHHHHHHHHhcccccceeEEccH
Confidence            99999841                          0233456677899999999864

>d1vi2a1 c.2.1.7 (A:107-288) Putative shikimate dehydrogenase YdiB {Escherichia coli [TaxId: 562]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Aminoacid dehydrogenase-like, C-terminal domain
domain: Putative shikimate dehydrogenase YdiB
species: Escherichia coli [TaxId: 562]

Probab=97.16  E-value=0.0016  Score=51.76  Aligned_cols=108  Identities=15%  Similarity=0.151  Sum_probs=70.8

Q ss_pred             hHhhhcCCCCCCCEEEEEcCChHHHHHHHHHHHcCC-eEEEEeCCchhHHH---HHHHcC----C-CEEecCCCHHHHHH
Q 018067          173 SPLRFYGLDKPGMHVGVVGLGGLGHVAVKFAKAMGV-KVTVISTSPSKKSE---AIERLG----A-DSFLVSRDQDEMQA  243 (361)
Q Consensus       173 ~~l~~~~~~~~g~~vlV~Gag~vG~~a~~la~~~g~-~vi~~~~~~~~~~~---~~~~~g----~-~~vv~~~~~~~~~~  243 (361)
                      .+++..+.--.+++|+|+|+|+.+.+++..+...|+ +++++.++.++...   ++++++    . ..+.+..+.+.+..
T Consensus         7 ~~l~~~~~~l~~k~vlIlGaGGaarai~~al~~~g~~~i~i~nR~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~   86 (182)
T d1vi2a1           7 RAIKESGFDIKGKTMVLLGAGGASTAIGAQGAIEGLKEIKLFNRRDEFFDKALAFAQRVNENTDCVVTVTDLADQQAFAE   86 (182)
T ss_dssp             HHHHHTTCCCTTCEEEEECCSHHHHHHHHHHHHTTCSEEEEEECSSTTHHHHHHHHHHHHHHSSCEEEEEETTCHHHHHH
T ss_pred             HHHHHcCCCcCCCEEEEECCcHHHHHHHHHHhhcCCceEeeeccchHHHHHHHHHHHHHHhhcCcceEeeecccccchhh
Confidence            345544433478899999999999999999999998 78888887654433   333332    2 23445555555555


Q ss_pred             hcCCccEEEEcCCCcc------cHHHHHhccccCCEEEEecCC
Q 018067          244 AMGTMDGIIDTVSAVH------PLMPLIGLLKSQGKLVLVGAP  280 (361)
Q Consensus       244 ~~~g~d~vid~~g~~~------~~~~~~~~l~~~G~~v~~g~~  280 (361)
                      ....+|++|+|+.-..      .+..-...++++..++++-..
T Consensus        87 ~~~~~diiIN~Tp~G~~~~~~~~~~~~~~~~~~~~~v~Di~Y~  129 (182)
T d1vi2a1          87 ALASADILTNGTKVGMKPLENESLVNDISLLHPGLLVTECVYN  129 (182)
T ss_dssp             HHHTCSEEEECSSTTSTTSCSCCSCCCGGGSCTTCEEEECCCS
T ss_pred             hhcccceeccccCCccccccchhhhhHHHhhhcchhhHHhhcC
Confidence            5568999999976321      011123567788888888543

>d1p77a1 c.2.1.7 (A:102-272) Shikimate 5-dehydrogenase AroE {Haemophilus influenzae [TaxId: 727]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Aminoacid dehydrogenase-like, C-terminal domain
domain: Shikimate 5-dehydrogenase AroE
species: Haemophilus influenzae [TaxId: 727]

Probab=97.09  E-value=0.00044  Score=54.52  Aligned_cols=102  Identities=20%  Similarity=0.148  Sum_probs=66.7

Q ss_pred             hhhcCCCCCCCEEEEEcCChHHHHHHHHHHHcCCeEEEEeCCchhHHHHHHHcCCC-EEecCCCHHHHHHhcCCccEEEE
Q 018067          175 LRFYGLDKPGMHVGVVGLGGLGHVAVKFAKAMGVKVTVISTSPSKKSEAIERLGAD-SFLVSRDQDEMQAAMGTMDGIID  253 (361)
Q Consensus       175 l~~~~~~~~g~~vlV~Gag~vG~~a~~la~~~g~~vi~~~~~~~~~~~~~~~~g~~-~vv~~~~~~~~~~~~~g~d~vid  253 (361)
                      ++......++++|+|+|+|+.+.+++..+...+.+++++.|+.++...+++.++.. .+..... +  ......+|++|+
T Consensus         9 l~~~~~~~~~k~vlIlGaGGaarai~~aL~~~~~~i~I~nR~~~~a~~l~~~~~~~~~~~~~~~-~--~~~~~~~diiIN   85 (171)
T d1p77a1           9 LQRLNWLRPNQHVLILGAGGATKGVLLPLLQAQQNIVLANRTFSKTKELAERFQPYGNIQAVSM-D--SIPLQTYDLVIN   85 (171)
T ss_dssp             HHHTTCCCTTCEEEEECCSHHHHTTHHHHHHTTCEEEEEESSHHHHHHHHHHHGGGSCEEEEEG-G--GCCCSCCSEEEE
T ss_pred             HHHcCCCCCCCEEEEECCcHHHHHHHHHHcccCceeeeccchHHHHHHHHHHHhhccccchhhh-c--cccccccceeee
Confidence            44444346899999999999999999988887789999999999988888877621 1111111 1  011247999999


Q ss_pred             cCCCccc---HHHHHhccccCCEEEEecC
Q 018067          254 TVSAVHP---LMPLIGLLKSQGKLVLVGA  279 (361)
Q Consensus       254 ~~g~~~~---~~~~~~~l~~~G~~v~~g~  279 (361)
                      |+.....   ...-.+.++++..++.+-.
T Consensus        86 ~tp~g~~~~~~~~~~~~~~~~~~~~D~vy  114 (171)
T d1p77a1          86 ATSAGLSGGTASVDAEILKLGSAFYDMQY  114 (171)
T ss_dssp             CCCC-------CCCHHHHHHCSCEEESCC
T ss_pred             cccccccccccchhhhhhcccceeeeeec
Confidence            9875320   0011234456677776654

>d1bg6a2 c.2.1.6 (A:4-187) N-(1-D-carboxylethyl)-L-norvaline dehydrogenase {Arthrobacter, strain 1c [TaxId: 1663]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: 6-phosphogluconate dehydrogenase-like, N-terminal domain
domain: N-(1-D-carboxylethyl)-L-norvaline dehydrogenase
species: Arthrobacter, strain 1c [TaxId: 1663]

Probab=97.09  E-value=0.0014  Score=51.80  Aligned_cols=91  Identities=20%  Similarity=0.215  Sum_probs=61.2

Q ss_pred             CCEEEEEcCChHHHHHHHHHHHcCCeEEEEeCCchhHHHHHHHcCCCEEecCCC---------HHHHHHhcCCccEEEEc
Q 018067          184 GMHVGVVGLGGLGHVAVKFAKAMGVKVTVISTSPSKKSEAIERLGADSFLVSRD---------QDEMQAAMGTMDGIIDT  254 (361)
Q Consensus       184 g~~vlV~Gag~vG~~a~~la~~~g~~vi~~~~~~~~~~~~~~~~g~~~vv~~~~---------~~~~~~~~~g~d~vid~  254 (361)
                      .+++.|+|+|.+|++.+..+...|.+|+++++++++.+.+. +.+.........         .....+....+|++|-+
T Consensus         1 sk~iaIiGaG~~G~~~A~~l~~~G~~V~~~~r~~~~~~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~e~~~~aD~iii~   79 (184)
T d1bg6a2           1 SKTYAVLGLGNGGHAFAAYLALKGQSVLAWDIDAQRIKEIQ-DRGAIIAEGPGLAGTAHPDLLTSDIGLAVKDADVILIV   79 (184)
T ss_dssp             CCEEEEECCSHHHHHHHHHHHHTTCEEEEECSCHHHHHHHH-HHTSEEEESSSCCEEECCSEEESCHHHHHTTCSEEEEC
T ss_pred             CCEEEEECccHHHHHHHHHHHHCCCEEEEEECCHHHHHHHH-HcCCCchhhhhhhhhhhhhhhhhhhHhHhcCCCEEEEE
Confidence            36899999999999999999999999999999988776663 444221110000         11234445689999999


Q ss_pred             CCCcccHHHHHh----ccccCCEEEE
Q 018067          255 VSAVHPLMPLIG----LLKSQGKLVL  276 (361)
Q Consensus       255 ~g~~~~~~~~~~----~l~~~G~~v~  276 (361)
                      +.... ....++    .+.++-.++.
T Consensus        80 v~~~~-~~~~~~~i~~~l~~~~~iv~  104 (184)
T d1bg6a2          80 VPAIH-HASIAANIASYISEGQLIIL  104 (184)
T ss_dssp             SCGGG-HHHHHHHHGGGCCTTCEEEE
T ss_pred             EchhH-HHHHHHHhhhccCCCCEEEE
Confidence            98765 444443    4445554443

>d2bd0a1 c.2.1.2 (A:2-241) Bacterial sepiapterin reductase {Chlorobium tepidum [TaxId: 1097]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Tyrosine-dependent oxidoreductases
domain: Bacterial sepiapterin reductase
species: Chlorobium tepidum [TaxId: 1097]

Probab=97.06  E-value=0.0015  Score=54.43  Aligned_cols=96  Identities=13%  Similarity=0.188  Sum_probs=66.4

Q ss_pred             EEEEEcC-ChHHHHHHHHHHHcCCe-------EEEEeCCchhHHHHHHHc---CCCE---EecCCCHHHHHHh-------
Q 018067          186 HVGVVGL-GGLGHVAVKFAKAMGVK-------VTVISTSPSKKSEAIERL---GADS---FLVSRDQDEMQAA-------  244 (361)
Q Consensus       186 ~vlV~Ga-g~vG~~a~~la~~~g~~-------vi~~~~~~~~~~~~~~~~---g~~~---vv~~~~~~~~~~~-------  244 (361)
                      .|||.|+ +++|.+++..+-..|++       |+..+++.++.+++.+++   |...   ..|-.+++.++++       
T Consensus         3 VvlITGas~GIG~aia~~la~~G~~~~~~~~~v~~~~r~~~~l~~~~~~~~~~g~~~~~~~~Dvt~~~~v~~~~~~~~~~   82 (240)
T d2bd0a1           3 ILLITGAGKGIGRAIALEFARAARHHPDFEPVLVLSSRTAADLEKISLECRAEGALTDTITADISDMADVRRLTTHIVER   82 (240)
T ss_dssp             EEEEETTTSHHHHHHHHHHHHHTTTCTTCCEEEEEEESCHHHHHHHHHHHHTTTCEEEEEECCTTSHHHHHHHHHHHHHH
T ss_pred             EEEEccCCCHHHHHHHHHHHHhCccccccCcEEEEEeCCHHHHHHHHHHHHhcCCcEEEEEecCCCHHHHHHHHHHHHHH
Confidence            3678897 99999999999888987       888899888777665544   4322   2355565443332       


Q ss_pred             cCCccEEEEcCCCcc-------------------------cHHHHHhccc--cCCEEEEecCCC
Q 018067          245 MGTMDGIIDTVSAVH-------------------------PLMPLIGLLK--SQGKLVLVGAPE  281 (361)
Q Consensus       245 ~~g~d~vid~~g~~~-------------------------~~~~~~~~l~--~~G~~v~~g~~~  281 (361)
                      .+++|++++++|...                         ..+.++..|+  .+|+++.+++..
T Consensus        83 ~g~iDilvnnAg~~~~~~~~~~~~~~~~~~~~vNl~g~~~~~~~~~~~m~~~~~G~Ii~isS~~  146 (240)
T d2bd0a1          83 YGHIDCLVNNAGVGRFGALSDLTEEDFDYTMNTNLKGTFFLTQALFALMERQHSGHIFFITSVA  146 (240)
T ss_dssp             TSCCSEEEECCCCCCCCCGGGCCHHHHHHHHHHHTHHHHHHHHHHHHHHHHHTCEEEEEECCGG
T ss_pred             cCCcceeecccccccCCccccCCHHHHhhcCCEeehHHHHHHHHHhHHHHhcCCCceEEEechh
Confidence            257999999998521                         2344555663  478999998643

>d1o5ia_ c.2.1.2 (A:) beta-keto acyl carrier protein reductase {Thermotoga maritima [TaxId: 2336]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Tyrosine-dependent oxidoreductases
domain: beta-keto acyl carrier protein reductase
species: Thermotoga maritima [TaxId: 2336]

Probab=97.05  E-value=0.00046  Score=57.41  Aligned_cols=71  Identities=17%  Similarity=0.181  Sum_probs=53.1

Q ss_pred             CCCEEEEEcC-ChHHHHHHHHHHHcCCeEEEEeCCchhHHHHHHHcCCCEE-ecCCC-HHHHHHhcCCccEEEEcCCC
Q 018067          183 PGMHVGVVGL-GGLGHVAVKFAKAMGVKVTVISTSPSKKSEAIERLGADSF-LVSRD-QDEMQAAMGTMDGIIDTVSA  257 (361)
Q Consensus       183 ~g~~vlV~Ga-g~vG~~a~~la~~~g~~vi~~~~~~~~~~~~~~~~g~~~v-v~~~~-~~~~~~~~~g~d~vid~~g~  257 (361)
                      +|+++||.|+ +++|.++++.+...|++|++++++++..    ++.+...+ .|-++ .+.+.+..+.+|++++++|.
T Consensus         3 kgK~~lVTGas~GIG~aia~~l~~~Ga~V~~~~r~~~~l----~~~~~~~~~~Dv~~~~~~~~~~~g~iD~lVnnAG~   76 (234)
T d1o5ia_           3 RDKGVLVLAASRGIGRAVADVLSQEGAEVTICARNEELL----KRSGHRYVVCDLRKDLDLLFEKVKEVDILVLNAGG   76 (234)
T ss_dssp             TTCEEEEESCSSHHHHHHHHHHHHTTCEEEEEESCHHHH----HHTCSEEEECCTTTCHHHHHHHSCCCSEEEECCCC
T ss_pred             CCCEEEEeCCCcHHHHHHHHHHHHCCCEEEEEECCHHHH----HhcCCcEEEcchHHHHHHHHHHhCCCcEEEecccc
Confidence            5789999997 9999999999999999999999986543    44554332 23222 34444445689999999985

>d1gega_ c.2.1.2 (A:) meso-2,3-butanediol dehydrogenase {Klebsiella pneumoniae [TaxId: 573]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Tyrosine-dependent oxidoreductases
domain: meso-2,3-butanediol dehydrogenase
species: Klebsiella pneumoniae [TaxId: 573]

Probab=97.04  E-value=0.0011  Score=55.86  Aligned_cols=72  Identities=19%  Similarity=0.289  Sum_probs=53.5

Q ss_pred             EEEEEcC-ChHHHHHHHHHHHcCCeEEEEeCCchhHHHHHHHc---CCCE---EecCCCHHHHHHh-------cCCccEE
Q 018067          186 HVGVVGL-GGLGHVAVKFAKAMGVKVTVISTSPSKKSEAIERL---GADS---FLVSRDQDEMQAA-------MGTMDGI  251 (361)
Q Consensus       186 ~vlV~Ga-g~vG~~a~~la~~~g~~vi~~~~~~~~~~~~~~~~---g~~~---vv~~~~~~~~~~~-------~~g~d~v  251 (361)
                      .+||.|+ +++|.+++..+...|++|+++++++++.+++.+++   |.+.   ..|-.+++.++++       .+++|++
T Consensus         3 ValITGas~GIG~aia~~la~~Ga~V~~~~r~~~~l~~~~~~i~~~g~~~~~~~~Dv~~~~~v~~~~~~~~~~~g~iDil   82 (255)
T d1gega_           3 VALVTGAGQGIGKAIALRLVKDGFAVAIADYNDATAKAVASEINQAGGHAVAVKVDVSDRDQVFAAVEQARKTLGGFDVI   82 (255)
T ss_dssp             EEEEETTTSHHHHHHHHHHHHTTCEEEEEESCHHHHHHHHHHHHHTTCCEEEEECCTTSHHHHHHHHHHHHHHTTCCCEE
T ss_pred             EEEEcCCccHHHHHHHHHHHHCCCEEEEEECCHHHHHHHHHHHHhcCCcEEEEEeeCCCHHHHHHHHHHHHHHhCCccEE
Confidence            4588887 99999999999999999999999988776665443   4432   2355565544432       2579999


Q ss_pred             EEcCCC
Q 018067          252 IDTVSA  257 (361)
Q Consensus       252 id~~g~  257 (361)
                      ++++|.
T Consensus        83 VnnAG~   88 (255)
T d1gega_          83 VNNAGV   88 (255)
T ss_dssp             EECCCC
T ss_pred             Eecccc
Confidence            999985

>d1geea_ c.2.1.2 (A:) Glucose dehydrogenase {Bacillus megaterium [TaxId: 1404]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Tyrosine-dependent oxidoreductases
domain: Glucose dehydrogenase
species: Bacillus megaterium [TaxId: 1404]

Probab=97.04  E-value=0.0016  Score=54.99  Aligned_cols=75  Identities=20%  Similarity=0.239  Sum_probs=54.2

Q ss_pred             CCCEEEEEcC-ChHHHHHHHHHHHcCCeEEEEeCCchh-HHHH---HHHcCCCE---EecCCCHHHHHHh-------cCC
Q 018067          183 PGMHVGVVGL-GGLGHVAVKFAKAMGVKVTVISTSPSK-KSEA---IERLGADS---FLVSRDQDEMQAA-------MGT  247 (361)
Q Consensus       183 ~g~~vlV~Ga-g~vG~~a~~la~~~g~~vi~~~~~~~~-~~~~---~~~~g~~~---vv~~~~~~~~~~~-------~~g  247 (361)
                      +|+++||.|+ +++|.++++.+...|++|++++++.++ .+.+   +++.|.+.   ..|-.+++.++++       .++
T Consensus         6 ~gK~alITGas~GIG~aia~~la~~G~~Vv~~~r~~~~~~~~~~~~~~~~g~~~~~~~~Dvt~~~~v~~~~~~~~~~~G~   85 (261)
T d1geea_           6 EGKVVVITGSSTGLGKSMAIRFATEKAKVVVNYRSKEDEANSVLEEIKKVGGEAIAVKGDVTVESDVINLVQSAIKEFGK   85 (261)
T ss_dssp             TTCEEEETTCSSHHHHHHHHHHHHTTCEEEEEESSCHHHHHHHHHHHHHTTCEEEEEECCTTSHHHHHHHHHHHHHHHSC
T ss_pred             CCCEEEEeCCCcHHHHHHHHHHHHCCCEEEEEeCCcHHHHHHHHHHHHhcCCcEEEEEccCCCHHHHHHHHHHHHHHhCC
Confidence            6889999987 999999999999999999999988643 3332   34455432   2355555544432       257


Q ss_pred             ccEEEEcCCC
Q 018067          248 MDGIIDTVSA  257 (361)
Q Consensus       248 ~d~vid~~g~  257 (361)
                      +|++++++|.
T Consensus        86 iDiLVnnAG~   95 (261)
T d1geea_          86 LDVMINNAGL   95 (261)
T ss_dssp             CCEEEECCCC
T ss_pred             CCEeecccee
Confidence            9999999985

>d1v8ba1 c.2.1.4 (A:235-397) S-adenosylhomocystein hydrolase {Plasmodium falciparum, isolate 3D7 [TaxId: 5833]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Formate/glycerate dehydrogenases, NAD-domain
domain: S-adenosylhomocystein hydrolase
species: Plasmodium falciparum, isolate 3D7 [TaxId: 5833]

Probab=96.99  E-value=0.0049  Score=47.23  Aligned_cols=102  Identities=17%  Similarity=0.175  Sum_probs=76.7

Q ss_pred             hhHhhhc-CCCCCCCEEEEEcCChHHHHHHHHHHHcCCeEEEEeCCchhHHHHHHHc-CCCEEecCCCHHHHHHhcCCcc
Q 018067          172 YSPLRFY-GLDKPGMHVGVVGLGGLGHVAVKFAKAMGVKVTVISTSPSKKSEAIERL-GADSFLVSRDQDEMQAAMGTMD  249 (361)
Q Consensus       172 ~~~l~~~-~~~~~g~~vlV~Gag~vG~~a~~la~~~g~~vi~~~~~~~~~~~~~~~~-g~~~vv~~~~~~~~~~~~~g~d  249 (361)
                      +.++.+. ...-.|++++|.|-|-+|.-.++-++.+|++|+++..++-+..++  .+ |.. +      -.+.++....|
T Consensus        10 ~d~i~r~t~~~laGk~vvV~GYG~vGrG~A~~~rg~Ga~V~V~E~DPi~alqA--~mdGf~-v------~~~~~a~~~aD   80 (163)
T d1v8ba1          10 PDGLMRATDFLISGKIVVICGYGDVGKGCASSMKGLGARVYITEIDPICAIQA--VMEGFN-V------VTLDEIVDKGD   80 (163)
T ss_dssp             HHHHHHHHCCCCTTSEEEEECCSHHHHHHHHHHHHHTCEEEEECSCHHHHHHH--HTTTCE-E------CCHHHHTTTCS
T ss_pred             HHHHHHHhCceecCCEEEEecccccchhHHHHHHhCCCEEEEEecCchhhHHH--HhcCCc-c------CchhHccccCc
Confidence            3344333 334689999999999999999999999999999998887554433  22 322 2      12345667899


Q ss_pred             EEEEcCCCccc-HHHHHhccccCCEEEEecCCCC
Q 018067          250 GIIDTVSAVHP-LMPLIGLLKSQGKLVLVGAPEK  282 (361)
Q Consensus       250 ~vid~~g~~~~-~~~~~~~l~~~G~~v~~g~~~~  282 (361)
                      +++-++|.... -..-++.|+.+..++..|....
T Consensus        81 i~vTaTGn~~vI~~~h~~~MKdgaIl~N~GHfd~  114 (163)
T d1v8ba1          81 FFITCTGNVDVIKLEHLLKMKNNAVVGNIGHFDD  114 (163)
T ss_dssp             EEEECCSSSSSBCHHHHTTCCTTCEEEECSSTTT
T ss_pred             EEEEcCCCCccccHHHHHHhhCCeEEEeccccch
Confidence            99999999764 4567899999999999987543

>d1r18a_ c.66.1.7 (A:) Protein-L-isoaspartyl O-methyltransferase {Fruit fly (Drosophila melanogaster) [TaxId: 7227]}

class: Alpha and beta proteins (a/b)
fold: S-adenosyl-L-methionine-dependent methyltransferases
superfamily: S-adenosyl-L-methionine-dependent methyltransferases
family: Protein-L-isoaspartyl O-methyltransferase
domain: Protein-L-isoaspartyl O-methyltransferase
species: Fruit fly (Drosophila melanogaster) [TaxId: 7227]

Probab=96.94  E-value=0.00071  Score=55.71  Aligned_cols=97  Identities=23%  Similarity=0.278  Sum_probs=60.0

Q ss_pred             CCCCCCEEEEEcCChHHHHHHHHHH---HcC----CeEEEEeCCchhHHHHHHH--------cCCC-EEecCCCHHHHHH
Q 018067          180 LDKPGMHVGVVGLGGLGHVAVKFAK---AMG----VKVTVISTSPSKKSEAIER--------LGAD-SFLVSRDQDEMQA  243 (361)
Q Consensus       180 ~~~~g~~vlV~Gag~vG~~a~~la~---~~g----~~vi~~~~~~~~~~~~~~~--------~g~~-~vv~~~~~~~~~~  243 (361)
                      .+++|++||.+|+|. |..++.+++   ..|    .+|+.+...++-.+...+.        ++.. ..+...+......
T Consensus        77 ~l~~g~~VLeIGtGs-GY~ta~la~l~g~~g~~~~~~V~~iE~~~~l~~~a~~~l~~~~~~~~~~~nv~~~~~d~~~~~~  155 (223)
T d1r18a_          77 HLKPGARILDVGSGS-GYLTACFYRYIKAKGVDADTRIVGIEHQAELVRRSKANLNTDDRSMLDSGQLLIVEGDGRKGYP  155 (223)
T ss_dssp             TCCTTCEEEEESCTT-SHHHHHHHHHHHHSCCCTTCEEEEEESCHHHHHHHHHHHHHHHHHHHHHTSEEEEESCGGGCCG
T ss_pred             ccCCCCeEEEecCCC-CHHHHHHHHHhhhccCCcccEEEEEecCHHHHHHHHHhhhhcchhhcCccEEEEEecccccccc
Confidence            589999999998743 555555554   444    3899988877543333221        1211 1122222111011


Q ss_pred             hcCCccEEEEcCCCcccHHHHHhccccCCEEEEe
Q 018067          244 AMGTMDGIIDTVSAVHPLMPLIGLLKSQGKLVLV  277 (361)
Q Consensus       244 ~~~g~d~vid~~g~~~~~~~~~~~l~~~G~~v~~  277 (361)
                      ..+.||.|+-+.+-+......++.|++||+++..
T Consensus       156 ~~~~fD~Iiv~~a~~~~p~~l~~~Lk~gG~lV~p  189 (223)
T d1r18a_         156 PNAPYNAIHVGAAAPDTPTELINQLASGGRLIVP  189 (223)
T ss_dssp             GGCSEEEEEECSCBSSCCHHHHHTEEEEEEEEEE
T ss_pred             cccceeeEEEEeechhchHHHHHhcCCCcEEEEE
Confidence            1247999988877777678889999999999874

>d1ooea_ c.2.1.2 (A:) Dihydropteridin reductase (pteridine reductase) {Nematode (Caenorhabditis elegans) [TaxId: 6239]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Tyrosine-dependent oxidoreductases
domain: Dihydropteridin reductase (pteridine reductase)
species: Nematode (Caenorhabditis elegans) [TaxId: 6239]

Probab=96.94  E-value=0.00015  Score=60.46  Aligned_cols=91  Identities=23%  Similarity=0.291  Sum_probs=60.2

Q ss_pred             CCEEEEEcC-ChHHHHHHHHHHHcCCeEEEEeCCchhHHHHHHHcCCCEEecCCC--H-------HHHHHh-c-CCccEE
Q 018067          184 GMHVGVVGL-GGLGHVAVKFAKAMGVKVTVISTSPSKKSEAIERLGADSFLVSRD--Q-------DEMQAA-M-GTMDGI  251 (361)
Q Consensus       184 g~~vlV~Ga-g~vG~~a~~la~~~g~~vi~~~~~~~~~~~~~~~~g~~~vv~~~~--~-------~~~~~~-~-~g~d~v  251 (361)
                      +.+|||.|+ +++|.+.++.+...|++|+++++++++..      .....+....  .       +.+... . ++.|++
T Consensus         2 ~gkVlITGas~GIG~aia~~l~~~G~~V~~~~~~~~~~~------~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~iD~l   75 (235)
T d1ooea_           2 SGKVIVYGGKGALGSAILEFFKKNGYTVLNIDLSANDQA------DSNILVDGNKNWTEQEQSILEQTASSLQGSQVDGV   75 (235)
T ss_dssp             CEEEEEETTTSHHHHHHHHHHHHTTEEEEEEESSCCTTS------SEEEECCTTSCHHHHHHHHHHHHHHHHTTCCEEEE
T ss_pred             CCEEEEECCCCHHHHHHHHHHHHCCCEEEEEECCchhcc------cccceeccccCchhHHHHHHHHHHHHhcCCCeeEE
Confidence            346899998 99999999999999999999998765321      1111111111  1       111111 1 369999


Q ss_pred             EEcCCCcc--------------------------cHHHHHhccccCCEEEEecCC
Q 018067          252 IDTVSAVH--------------------------PLMPLIGLLKSQGKLVLVGAP  280 (361)
Q Consensus       252 id~~g~~~--------------------------~~~~~~~~l~~~G~~v~~g~~  280 (361)
                      |+++|...                          ..+..+..++++|+++.++..
T Consensus        76 innAG~~~~~~~~~~~~~~~~~~~~~~n~~~~~~~~~~~~~~m~~~g~Iv~isS~  130 (235)
T d1ooea_          76 FCVAGGWAGGSASSKDFVKNADLMIKQSVWSSAIAAKLATTHLKPGGLLQLTGAA  130 (235)
T ss_dssp             EECCCCCCCBCTTSTTHHHHHHHHHHHHHHHHHHHHHHHHHHEEEEEEEEEECCG
T ss_pred             EECCcccccccccccCcHHHHhhHhhhHHHHHHHHhhhcccccccceEEEEeccH
Confidence            99998410                          234466677889999999864

>d1zmta1 c.2.1.2 (A:2-253) Halohydrin dehalogenase HheC {Agrobacterium tumefaciens [TaxId: 358]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Tyrosine-dependent oxidoreductases
domain: Halohydrin dehalogenase HheC
species: Agrobacterium tumefaciens [TaxId: 358]

Probab=96.92  E-value=0.00053  Score=57.70  Aligned_cols=97  Identities=11%  Similarity=0.091  Sum_probs=64.1

Q ss_pred             CEEEEEcC-ChHHHHHHHHHHHcCCeEEEEeCCchhHHHHHH---HcCCCEEecCCCHH-HHH---HhcCCccEEEEcCC
Q 018067          185 MHVGVVGL-GGLGHVAVKFAKAMGVKVTVISTSPSKKSEAIE---RLGADSFLVSRDQD-EMQ---AAMGTMDGIIDTVS  256 (361)
Q Consensus       185 ~~vlV~Ga-g~vG~~a~~la~~~g~~vi~~~~~~~~~~~~~~---~~g~~~vv~~~~~~-~~~---~~~~g~d~vid~~g  256 (361)
                      .++||.|+ +++|++++..+...|++|++.+++.++.+++.+   .+....+.+..+.+ .++   +..++.|++|+++|
T Consensus         1 ~TAlVTGas~GiG~aiA~~la~~Ga~V~i~~r~~~~~~~~~~~~~~~~~~dv~~~~~~~~~~~~~~~~~G~iDiLVnNAg   80 (252)
T d1zmta1           1 STAIVTNVKHFGGMGSALRLSEAGHTVACHDESFKQKDELEAFAETYPQLKPMSEQEPAELIEAVTSAYGQVDVLVSNDI   80 (252)
T ss_dssp             CEEEESSTTSTTHHHHHHHHHHTTCEEEECCGGGGSHHHHHHHHHHCTTSEECCCCSHHHHHHHHHHHHSCCCEEEEECC
T ss_pred             CEEEEECCCCHHHHHHHHHHHHCCCEEEEEECCHHHHHHHHhhhCcEEEeccCCHHHHHHHHHHHHHHcCCCCEEEECCc
Confidence            37899997 899999999999999999999988777665532   22223333444422 222   22358999999877


Q ss_pred             Ccc--------------------------cHHHHHhcc--ccCCEEEEecCCC
Q 018067          257 AVH--------------------------PLMPLIGLL--KSQGKLVLVGAPE  281 (361)
Q Consensus       257 ~~~--------------------------~~~~~~~~l--~~~G~~v~~g~~~  281 (361)
                      ...                          ..+.++..|  +.+|++|.+++..
T Consensus        81 ~~~~~~~~~~~~~e~~~~~~~vnl~~~~~~~~~~~~~m~~~~~G~IV~isS~~  133 (252)
T d1zmta1          81 FAPEFQPIDKYAVEDYRGAVEALQIRPFALVNAVASQMKKRKSGHIIFITSAT  133 (252)
T ss_dssp             CCCCCCCGGGSCHHHHHHHHHHHTHHHHHHHHHHHHHHHHHTCCEEEEECCST
T ss_pred             CCCCCCChhhCCHHHHHHHHHHHhHHHHHHHHHHHHhhcccccceeecccccc
Confidence            420                          222344445  3469999998754

>d1edoa_ c.2.1.2 (A:) beta-keto acyl carrier protein reductase {Oil seed rape (Brassica napus) [TaxId: 3708]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Tyrosine-dependent oxidoreductases
domain: beta-keto acyl carrier protein reductase
species: Oil seed rape (Brassica napus) [TaxId: 3708]

Probab=96.89  E-value=0.0022  Score=53.43  Aligned_cols=95  Identities=20%  Similarity=0.265  Sum_probs=63.6

Q ss_pred             EEEEEcC-ChHHHHHHHHHHHcCCeEEEEeC-CchhHHHHH---HHcCCCE---EecCCCHHHHHHh-------cCCccE
Q 018067          186 HVGVVGL-GGLGHVAVKFAKAMGVKVTVIST-SPSKKSEAI---ERLGADS---FLVSRDQDEMQAA-------MGTMDG  250 (361)
Q Consensus       186 ~vlV~Ga-g~vG~~a~~la~~~g~~vi~~~~-~~~~~~~~~---~~~g~~~---vv~~~~~~~~~~~-------~~g~d~  250 (361)
                      .|||.|+ +++|+++++.+...|++|++.+. +++..+.+.   ++.|.+.   ..|-.+++.++++       .+++|+
T Consensus         3 V~lITGas~GIG~a~a~~la~~Ga~V~i~~~~~~~~~~~~~~~~~~~g~~~~~~~~Dv~~~~~v~~~~~~~~~~~g~iDi   82 (244)
T d1edoa_           3 VVVVTGASRGIGKAIALSLGKAGCKVLVNYARSAKAAEEVSKQIEAYGGQAITFGGDVSKEADVEAMMKTAIDAWGTIDV   82 (244)
T ss_dssp             EEEETTCSSHHHHHHHHHHHHTTCEEEEEESSCHHHHHHHHHHHHHHTCEEEEEECCTTSHHHHHHHHHHHHHHSSCCSE
T ss_pred             EEEEeCCCcHHHHHHHHHHHHCCCEEEEEeCCCHHHHHHHHHHHHHcCCcEEEEeCCCCCHHHHHHHHHHHHHHcCCCCc
Confidence            4677787 99999999999999999988765 444444333   3445432   2355555444332       257999


Q ss_pred             EEEcCCCcc-------------------------cHHHHHhcc--ccCCEEEEecCC
Q 018067          251 IIDTVSAVH-------------------------PLMPLIGLL--KSQGKLVLVGAP  280 (361)
Q Consensus       251 vid~~g~~~-------------------------~~~~~~~~l--~~~G~~v~~g~~  280 (361)
                      +++++|...                         ..+.++..|  +.+|++|.+++.
T Consensus        83 LVnnAg~~~~~~~~~~~~~~~~~~~~vNl~~~~~~~~~~~~~m~~~~~G~IVnisS~  139 (244)
T d1edoa_          83 VVNNAGITRDTLLIRMKKSQWDEVIDLNLTGVFLCTQAATKIMMKKRKGRIINIASV  139 (244)
T ss_dssp             EEECCCCCCCCCGGGCCHHHHHHHHHHHTHHHHHHHHHHHHHHHHHTCEEEEEECCT
T ss_pred             cccccccccccchhccchHHHHHHHhhhhhhHHHHHHHHHHHHHHcCCcEEEEEcCh
Confidence            999998531                         334455555  467999999874

>d1yb2a1 c.66.1.13 (A:6-255) Hypothetical protein Ta0852 {Thermoplasma acidophilum [TaxId: 2303]}

class: Alpha and beta proteins (a/b)
fold: S-adenosyl-L-methionine-dependent methyltransferases
superfamily: S-adenosyl-L-methionine-dependent methyltransferases
family: tRNA(1-methyladenosine) methyltransferase-like
domain: Hypothetical protein Ta0852
species: Thermoplasma acidophilum [TaxId: 2303]

Probab=96.81  E-value=0.00069  Score=56.74  Aligned_cols=98  Identities=15%  Similarity=0.208  Sum_probs=64.8

Q ss_pred             cCCCCCCCEEEEEcCChHHHHHHHHHHHcC--CeEEEEeCCchhHHHHHHH---cC-CCEE-ecCCCHHHHHHhc-CCcc
Q 018067          178 YGLDKPGMHVGVVGLGGLGHVAVKFAKAMG--VKVTVISTSPSKKSEAIER---LG-ADSF-LVSRDQDEMQAAM-GTMD  249 (361)
Q Consensus       178 ~~~~~~g~~vlV~Gag~vG~~a~~la~~~g--~~vi~~~~~~~~~~~~~~~---~g-~~~v-v~~~~~~~~~~~~-~g~d  249 (361)
                      ...++||++||=.|+|. |.++..+|++.|  .+|+.++.+++..+.+.+.   ++ ...+ +...+  ....+. ..+|
T Consensus        80 ~l~i~pG~rVLEiG~Gs-G~lt~~la~~v~~~g~V~~vD~~e~~~~~A~~n~~~~~~~~nv~~~~~D--i~~~~~~~~fD  156 (250)
T d1yb2a1          80 RCGLRPGMDILEVGVGS-GNMSSYILYALNGKGTLTVVERDEDNLKKAMDNLSEFYDIGNVRTSRSD--IADFISDQMYD  156 (250)
T ss_dssp             -CCCCTTCEEEEECCTT-SHHHHHHHHHHTTSSEEEEECSCHHHHHHHHHHHHTTSCCTTEEEECSC--TTTCCCSCCEE
T ss_pred             HcCCCCcCEEEEeeeeC-cHHHHHHHHHhCCCcEEEEEECCHHHHHHHHHHHHHhcCCCceEEEEee--eecccccceee
Confidence            35589999999999865 777888888865  4899999888766555432   22 2221 11122  111122 3699


Q ss_pred             EEEEcCCC-cccHHHHHhccccCCEEEEec
Q 018067          250 GIIDTVSA-VHPLMPLIGLLKSQGKLVLVG  278 (361)
Q Consensus       250 ~vid~~g~-~~~~~~~~~~l~~~G~~v~~g  278 (361)
                      .||--... ...+..+.+.|+|||+++.+.
T Consensus       157 ~V~ld~p~p~~~l~~~~~~LKpGG~lv~~~  186 (250)
T d1yb2a1         157 AVIADIPDPWNHVQKIASMMKPGSVATFYL  186 (250)
T ss_dssp             EEEECCSCGGGSHHHHHHTEEEEEEEEEEE
T ss_pred             eeeecCCchHHHHHHHHHhcCCCceEEEEe
Confidence            88754444 456889999999999998763

>d1b0aa1 c.2.1.7 (A:123-288) Methylenetetrahydrofolate dehydrogenase/cyclohydrolase {Escherichia coli [TaxId: 562]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Aminoacid dehydrogenase-like, C-terminal domain
domain: Methylenetetrahydrofolate dehydrogenase/cyclohydrolase
species: Escherichia coli [TaxId: 562]

Probab=96.80  E-value=0.0049  Score=47.60  Aligned_cols=96  Identities=18%  Similarity=0.145  Sum_probs=75.4

Q ss_pred             cccchhhhhhhhHhhhcCCCCCCCEEEEEcC-ChHHHHHHHHHHHcCCeEEEEeCCchhHHHHHHHcCCCEEecCCCHHH
Q 018067          162 APLLCAGITVYSPLRFYGLDKPGMHVGVVGL-GGLGHVAVKFAKAMGVKVTVISTSPSKKSEAIERLGADSFLVSRDQDE  240 (361)
Q Consensus       162 a~l~~~~~ta~~~l~~~~~~~~g~~vlV~Ga-g~vG~~a~~la~~~g~~vi~~~~~~~~~~~~~~~~g~~~vv~~~~~~~  240 (361)
                      ..+||+..+.+..+++..---.|++|+|+|. ..+|.-.+.++...|++|+++.+........                 
T Consensus        15 ~~~PcTp~aI~~lL~~y~i~l~GK~v~VIGrS~~VG~Pla~lL~~~gatVt~~h~~t~~l~~~-----------------   77 (166)
T d1b0aa1          15 RLRPCTPRGIVTLLERYNIDTFGLNAVVIGASNIVGRPMSMELLLAGCTTTVTHRFTKNLRHH-----------------   77 (166)
T ss_dssp             SSCCHHHHHHHHHHHHTTCCCTTCEEEEECCCTTTHHHHHHHHHTTTCEEEEECSSCSCHHHH-----------------
T ss_pred             CCCCchHHHHHHHHHHcCcccccceEEEEeccccccHHHHHHHHHhhccccccccccchhHHH-----------------
Confidence            4678888888888888776568999999997 6799999999999999998877655433322                 


Q ss_pred             HHHhcCCccEEEEcCCCcccHHHHHhccccCCEEEEecCC
Q 018067          241 MQAAMGTMDGIIDTVSAVHPLMPLIGLLKSQGKLVLVGAP  280 (361)
Q Consensus       241 ~~~~~~g~d~vid~~g~~~~~~~~~~~l~~~G~~v~~g~~  280 (361)
                          ...+|+++-++|.+..+.  .+.++++..++.+|..
T Consensus        78 ----~~~ADivI~a~G~p~~i~--~~~vk~g~vvIDvGi~  111 (166)
T d1b0aa1          78 ----VENADLLIVAVGKPGFIP--GDWIKEGAIVIDVGIN  111 (166)
T ss_dssp             ----HHHCSEEEECSCCTTCBC--TTTSCTTCEEEECCCE
T ss_pred             ----HhhhhHhhhhccCccccc--ccccCCCcEEEecCce
Confidence                224789999999877443  4578899999999874

>d2o23a1 c.2.1.2 (A:6-253) Type II 3-hydroxyacyl-CoA dehydrogenase {Human (Homo sapiens) [TaxId: 9606]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Tyrosine-dependent oxidoreductases
domain: Type II 3-hydroxyacyl-CoA dehydrogenase
species: Human (Homo sapiens) [TaxId: 9606]

Probab=96.73  E-value=0.0041  Score=51.73  Aligned_cols=48  Identities=19%  Similarity=0.320  Sum_probs=44.1

Q ss_pred             CCCEEEEEcC-ChHHHHHHHHHHHcCCeEEEEeCCchhHHHHHHHcCCC
Q 018067          183 PGMHVGVVGL-GGLGHVAVKFAKAMGVKVTVISTSPSKKSEAIERLGAD  230 (361)
Q Consensus       183 ~g~~vlV~Ga-g~vG~~a~~la~~~g~~vi~~~~~~~~~~~~~~~~g~~  230 (361)
                      +|+++||.|+ +++|.++++.+...|++|+++++++++.+.+.++++..
T Consensus         4 kGKvalITGas~GIG~aia~~la~~G~~V~~~~r~~~~~~~~~~~l~~~   52 (248)
T d2o23a1           4 KGLVAVITGGASGLGLATAERLVGQGASAVLLDLPNSGGEAQAKKLGNN   52 (248)
T ss_dssp             TTCEEEEETTTSHHHHHHHHHHHHTTCEEEEEECTTSSHHHHHHHHCTT
T ss_pred             CCCEEEEeCCCCHHHHHHHHHHHHCCCEEEEEeCChHHHHHHHHHhCCC
Confidence            6899999997 99999999999999999999999999998888888764

>d2ahra2 c.2.1.6 (A:1-152) Pyrroline-5-carboxylate reductase ProC {Streptococcus pyogenes [TaxId: 1314]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: 6-phosphogluconate dehydrogenase-like, N-terminal domain
domain: Pyrroline-5-carboxylate reductase ProC
species: Streptococcus pyogenes [TaxId: 1314]

Probab=96.72  E-value=0.0028  Score=48.66  Aligned_cols=87  Identities=16%  Similarity=0.250  Sum_probs=66.9

Q ss_pred             EEEEEcCChHHHHHHHHHHHcCCeEEEEeCCchhHHHHHHHcCCCEEecCCCHHHHHHhcCCccEEEEcCCCcccHHHHH
Q 018067          186 HVGVVGLGGLGHVAVKFAKAMGVKVTVISTSPSKKSEAIERLGADSFLVSRDQDEMQAAMGTMDGIIDTVSAVHPLMPLI  265 (361)
Q Consensus       186 ~vlV~Gag~vG~~a~~la~~~g~~vi~~~~~~~~~~~~~~~~g~~~vv~~~~~~~~~~~~~g~d~vid~~g~~~~~~~~~  265 (361)
                      +|.++|+|.+|.+.+.-+...|.++++..++.++..++.+++|....   .+.   .+.....|+||-++--.. +...+
T Consensus         2 kIg~IG~G~mG~al~~~l~~~~~~i~v~~r~~~~~~~l~~~~g~~~~---~~~---~~~~~~~dvIilavkp~~-~~~vl   74 (152)
T d2ahra2           2 KIGIIGVGKMASAIIKGLKQTPHELIISGSSLERSKEIAEQLALPYA---MSH---QDLIDQVDLVILGIKPQL-FETVL   74 (152)
T ss_dssp             EEEEECCSHHHHHHHHHHTTSSCEEEEECSSHHHHHHHHHHHTCCBC---SSH---HHHHHTCSEEEECSCGGG-HHHHH
T ss_pred             EEEEEeccHHHHHHHHHHHhCCCeEEEEcChHHhHHhhccccceeee---chh---hhhhhccceeeeecchHh-HHHHh
Confidence            57889999999998887777788999999999988888888886532   121   223347999999986444 78888


Q ss_pred             hccccCCEEEEecC
Q 018067          266 GLLKSQGKLVLVGA  279 (361)
Q Consensus       266 ~~l~~~G~~v~~g~  279 (361)
                      ..++++..++.+..
T Consensus        75 ~~l~~~~~iis~~a   88 (152)
T d2ahra2          75 KPLHFKQPIISMAA   88 (152)
T ss_dssp             TTSCCCSCEEECCT
T ss_pred             hhcccceeEecccc
Confidence            88888888776643

>d1yo6a1 c.2.1.2 (A:1-250) Putative carbonyl reductase sniffer {Caenorhabditis elegans [TaxId: 6239]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Tyrosine-dependent oxidoreductases
domain: Putative carbonyl reductase sniffer
species: Caenorhabditis elegans [TaxId: 6239]

Probab=96.67  E-value=0.0019  Score=54.00  Aligned_cols=74  Identities=14%  Similarity=0.049  Sum_probs=53.3

Q ss_pred             CCEEEEEcC-ChHHHHHHHHHHHcCC--eEEEEeCCchhHHHHHHHcCCC---EEecCCCHHHHHHh----c-----CCc
Q 018067          184 GMHVGVVGL-GGLGHVAVKFAKAMGV--KVTVISTSPSKKSEAIERLGAD---SFLVSRDQDEMQAA----M-----GTM  248 (361)
Q Consensus       184 g~~vlV~Ga-g~vG~~a~~la~~~g~--~vi~~~~~~~~~~~~~~~~g~~---~vv~~~~~~~~~~~----~-----~g~  248 (361)
                      .++|||.|+ +++|.++++.+...|+  +|+.+.++.++..++.+..+..   ...|..+.+.++++    .     .+.
T Consensus         3 ~KtilITGassGIG~a~a~~la~~G~~~~Vi~~~R~~~~~~~l~~~~~~~~~~~~~Dvs~~~~v~~~~~~i~~~~~~~~i   82 (250)
T d1yo6a1           3 PGSVVVTGANRGIGLGLVQQLVKDKNIRHIIATARDVEKATELKSIKDSRVHVLPLTVTCDKSLDTFVSKVGEIVGSDGL   82 (250)
T ss_dssp             CSEEEESSCSSHHHHHHHHHHHTCTTCCEEEEEESSGGGCHHHHTCCCTTEEEEECCTTCHHHHHHHHHHHHHHHGGGCC
T ss_pred             CCEEEEeCCCCHHHHHHHHHHHHCCCCCEEEEEeCCHHHHHHHHHhhCCceEEEEEecCCHHHHHHHHHHHHHHhCCCCe
Confidence            478999998 9999999998888886  7888899988887775544443   22355555433322    1     259


Q ss_pred             cEEEEcCCC
Q 018067          249 DGIIDTVSA  257 (361)
Q Consensus       249 d~vid~~g~  257 (361)
                      |++|+++|.
T Consensus        83 dilinnAG~   91 (250)
T d1yo6a1          83 SLLINNAGV   91 (250)
T ss_dssp             CEEEECCCC
T ss_pred             EEEEEcCcc
Confidence            999999984

>d2hmva1 c.2.1.9 (A:7-140) Ktn bsu222 {Bacillus subtilis [TaxId: 1423]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Potassium channel NAD-binding domain
domain: Ktn bsu222
species: Bacillus subtilis [TaxId: 1423]

Probab=96.66  E-value=0.0014  Score=49.11  Aligned_cols=73  Identities=19%  Similarity=0.300  Sum_probs=55.8

Q ss_pred             EEEEEcCChHHHHHHHHHHHcCCeEEEEeCCchhHHHHHHHcCCCEEe-cCCCHHHHHHhc-CCccEEEEcCCCcc
Q 018067          186 HVGVVGLGGLGHVAVKFAKAMGVKVTVISTSPSKKSEAIERLGADSFL-VSRDQDEMQAAM-GTMDGIIDTVSAVH  259 (361)
Q Consensus       186 ~vlV~Gag~vG~~a~~la~~~g~~vi~~~~~~~~~~~~~~~~g~~~vv-~~~~~~~~~~~~-~g~d~vid~~g~~~  259 (361)
                      +++|+|.|.+|..+++.+...|.+|++++.++++.+++ +..+...++ |..+++.+.++. ..+|.+|-+++...
T Consensus         2 ~~iIiG~G~~G~~la~~L~~~g~~vvvid~d~~~~~~~-~~~~~~~~~gd~~~~~~l~~a~i~~a~~vi~~~~~~~   76 (134)
T d2hmva1           2 QFAVIGLGRFGGSIVKELHRMGHEVLAVDINEEKVNAY-ASYATHAVIANATEENELLSLGIRNFEYVIVAIGANI   76 (134)
T ss_dssp             CEEEECCSHHHHHHHHHHHHTTCCCEEEESCHHHHHHT-TTTCSEEEECCTTCTTHHHHHTGGGCSEEEECCCSCH
T ss_pred             EEEEECCCHHHHHHHHHHHHCCCeEEEecCcHHHHHHH-HHhCCcceeeecccchhhhccCCccccEEEEEcCchH
Confidence            57888999999999999999999999999998887777 455654333 444556665553 46898888887653

>d2f1ka2 c.2.1.6 (A:1-165) Prephenate dehydrogenase TyrA {Synechocystis sp. pcc 6803 [TaxId: 1148]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: 6-phosphogluconate dehydrogenase-like, N-terminal domain
domain: Prephenate dehydrogenase TyrA
species: Synechocystis sp. pcc 6803 [TaxId: 1148]

Probab=96.66  E-value=0.0072  Score=46.74  Aligned_cols=87  Identities=22%  Similarity=0.139  Sum_probs=59.6

Q ss_pred             EEEEEcCChHHHHHHHHHHHcCCeEEEEeCCchhHHHHHHHcCC-CEEecCCCHHHHHHhcCCccEEEEcCCCcc---cH
Q 018067          186 HVGVVGLGGLGHVAVKFAKAMGVKVTVISTSPSKKSEAIERLGA-DSFLVSRDQDEMQAAMGTMDGIIDTVSAVH---PL  261 (361)
Q Consensus       186 ~vlV~Gag~vG~~a~~la~~~g~~vi~~~~~~~~~~~~~~~~g~-~~vv~~~~~~~~~~~~~g~d~vid~~g~~~---~~  261 (361)
                      +|.|+|+|.+|...+..++..|.+|++.+++++..+.+ ++.|. +...+..      +.....|+||-++....   .+
T Consensus         2 kI~iIG~G~mG~~lA~~l~~~g~~V~~~d~~~~~~~~a-~~~~~~~~~~~~~------~~~~~~DiIilavp~~~~~~vl   74 (165)
T d2f1ka2           2 KIGVVGLGLIGASLAGDLRRRGHYLIGVSRQQSTCEKA-VERQLVDEAGQDL------SLLQTAKIIFLCTPIQLILPTL   74 (165)
T ss_dssp             EEEEECCSHHHHHHHHHHHHTTCEEEEECSCHHHHHHH-HHTTSCSEEESCG------GGGTTCSEEEECSCHHHHHHHH
T ss_pred             EEEEEeecHHHHHHHHHHHHCCCEEEEEECCchHHHHH-HHhhccceeeeec------ccccccccccccCcHhhhhhhh
Confidence            58899999999999999999999999999888776655 56664 4332211      22346888888876432   23


Q ss_pred             HHHHhccccCCEEEEecC
Q 018067          262 MPLIGLLKSQGKLVLVGA  279 (361)
Q Consensus       262 ~~~~~~l~~~G~~v~~g~  279 (361)
                      +.....+.++-.++.++.
T Consensus        75 ~~l~~~l~~~~iv~~~~s   92 (165)
T d2f1ka2          75 EKLIPHLSPTAIVTDVAS   92 (165)
T ss_dssp             HHHGGGSCTTCEEEECCS
T ss_pred             hhhhhhcccccceeeccc
Confidence            334444555666666654

>d1pjza_ c.66.1.36 (A:) Thiopurine S-methyltransferase {Pseudomonas syringae [TaxId: 317]}

class: Alpha and beta proteins (a/b)
fold: S-adenosyl-L-methionine-dependent methyltransferases
superfamily: S-adenosyl-L-methionine-dependent methyltransferases
family: Thiopurine S-methyltransferase
domain: Thiopurine S-methyltransferase
species: Pseudomonas syringae [TaxId: 317]

Probab=96.63  E-value=0.0013  Score=52.42  Aligned_cols=97  Identities=14%  Similarity=0.100  Sum_probs=63.1

Q ss_pred             CCCCCCEEEEEcCChHHHHHHHHHHHcCCeEEEEeCCchhHHHHHHHcCCCEE---------ecCCC--------HHHHH
Q 018067          180 LDKPGMHVGVVGLGGLGHVAVKFAKAMGVKVTVISTSPSKKSEAIERLGADSF---------LVSRD--------QDEMQ  242 (361)
Q Consensus       180 ~~~~g~~vlV~Gag~vG~~a~~la~~~g~~vi~~~~~~~~~~~~~~~~g~~~v---------v~~~~--------~~~~~  242 (361)
                      .+.+|++||.+|+|. |..+..+|+. |++|+.++-++.....+.+..+....         .....        .+...
T Consensus        17 ~~~~~~rvLd~GCG~-G~~a~~la~~-G~~V~gvD~S~~~i~~a~~~~~~~~~~~~~~~~~~~~~~~~~~~~~d~~~l~~   94 (201)
T d1pjza_          17 NVVPGARVLVPLCGK-SQDMSWLSGQ-GYHVVGAELSEAAVERYFTERGEQPHITSQGDFKVYAAPGIEIWCGDFFALTA   94 (201)
T ss_dssp             CCCTTCEEEETTTCC-SHHHHHHHHH-CCEEEEEEECHHHHHHHHHHHCSCSEEEEETTEEEEECSSSEEEEECCSSSTH
T ss_pred             CCCCCCEEEEecCcC-CHHHHHHHHc-CCceEeecccHHHHHHHHHHhccccchhhhhhhhhccccccceeccccccccc
Confidence            378999999999875 7788888874 99999999998887776554432110         00000        01111


Q ss_pred             HhcCCccEEEEcCCCc--------ccHHHHHhccccCCEEEEec
Q 018067          243 AAMGTMDGIIDTVSAV--------HPLMPLIGLLKSQGKLVLVG  278 (361)
Q Consensus       243 ~~~~g~d~vid~~g~~--------~~~~~~~~~l~~~G~~v~~g  278 (361)
                      .....+|.|++...-.        ..+....+.|+++|+++...
T Consensus        95 ~~~~~~D~i~~~~~l~~l~~~~~~~~~~~i~~~LkpgG~l~l~~  138 (201)
T d1pjza_          95 RDIGHCAAFYDRAAMIALPADMRERYVQHLEALMPQACSGLLIT  138 (201)
T ss_dssp             HHHHSEEEEEEESCGGGSCHHHHHHHHHHHHHHSCSEEEEEEEE
T ss_pred             ccccceeEEEEEeeeEecchhhhHHHHHHHHHhcCCCcEEEEEE
Confidence            1223689988854422        23566888999999977643

>d1vpda2 c.2.1.6 (A:3-163) Hydroxyisobutyrate dehydrogenase {Salmonella typhimurium [TaxId: 90371]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: 6-phosphogluconate dehydrogenase-like, N-terminal domain
domain: Hydroxyisobutyrate dehydrogenase
species: Salmonella typhimurium [TaxId: 90371]

Probab=96.63  E-value=0.01  Score=45.72  Aligned_cols=89  Identities=22%  Similarity=0.287  Sum_probs=62.9

Q ss_pred             EEEEEcCChHHHHHHHHHHHcCCeEEEEeCCchhHHHHHHHcCCCEEecCCCHHHHHHhcCCccEEEEcCCCcccHHH--
Q 018067          186 HVGVVGLGGLGHVAVKFAKAMGVKVTVISTSPSKKSEAIERLGADSFLVSRDQDEMQAAMGTMDGIIDTVSAVHPLMP--  263 (361)
Q Consensus       186 ~vlV~Gag~vG~~a~~la~~~g~~vi~~~~~~~~~~~~~~~~g~~~vv~~~~~~~~~~~~~g~d~vid~~g~~~~~~~--  263 (361)
                      +|-|+|.|.+|...+.-+...|.+|++.++++++.+.+. +.++..   ..+.   .+.....|++|-|+..+.....  
T Consensus         2 kIgiIGlG~MG~~~A~~L~~~G~~V~~~d~~~~~~~~~~-~~~~~~---~~~~---~e~~~~~d~ii~~v~~~~~v~~v~   74 (161)
T d1vpda2           2 KVGFIGLGIMGKPMSKNLLKAGYSLVVSDRNPEAIADVI-AAGAET---ASTA---KAIAEQCDVIITMLPNSPHVKEVA   74 (161)
T ss_dssp             EEEEECCSTTHHHHHHHHHHTTCEEEEECSCHHHHHHHH-HTTCEE---CSSH---HHHHHHCSEEEECCSSHHHHHHHH
T ss_pred             EEEEEehhHHHHHHHHHHHHCCCeEEEEeCCcchhHHHH-Hhhhhh---cccH---HHHHhCCCeEEEEcCCHHHHHHHH
Confidence            478899999999999988889999999999998887774 556532   1221   2233358999999877553443  


Q ss_pred             -----HHhccccCCEEEEecCCC
Q 018067          264 -----LIGLLKSQGKLVLVGAPE  281 (361)
Q Consensus       264 -----~~~~l~~~G~~v~~g~~~  281 (361)
                           ....++++-.++.++...
T Consensus        75 ~~~~~~~~~~~~g~iiid~sT~~   97 (161)
T d1vpda2          75 LGENGIIEGAKPGTVLIDMSSIA   97 (161)
T ss_dssp             HSTTCHHHHCCTTCEEEECSCCC
T ss_pred             hCCcchhhccCCCCEEEECCCCC
Confidence                 334556677777776643

>d2nxca1 c.66.1.39 (A:1-254) PrmA-like protein TTHA0656 (TT0836) {Thermus thermophilus [TaxId: 274]}

class: Alpha and beta proteins (a/b)
fold: S-adenosyl-L-methionine-dependent methyltransferases
superfamily: S-adenosyl-L-methionine-dependent methyltransferases
family: Ribosomal protein L11 methyltransferase PrmA
domain: PrmA-like protein TTHA0656 (TT0836)
species: Thermus thermophilus [TaxId: 274]

Probab=96.59  E-value=0.008  Score=50.14  Aligned_cols=125  Identities=19%  Similarity=0.218  Sum_probs=71.9

Q ss_pred             CceEECCCCCCcccccccchhhhhhhhHhhhcCCCCCCCEEEEEcCChHHHHHHHHHHHcCCeEEEEeCCchhHHHHH--
Q 018067          147 HFVVRIPEGTPLDATAPLLCAGITVYSPLRFYGLDKPGMHVGVVGLGGLGHVAVKFAKAMGVKVTVISTSPSKKSEAI--  224 (361)
Q Consensus       147 ~~~~~ip~~~~~~~aa~l~~~~~ta~~~l~~~~~~~~g~~vlV~Gag~vG~~a~~la~~~g~~vi~~~~~~~~~~~~~--  224 (361)
                      ...+.+.+++.|....--. + .-+...+...  .++|++||=+|+|. |..++.+++ .|++|+.++.+++..+.+.  
T Consensus        88 ~~~i~i~pg~aFGTG~H~T-T-~l~l~~l~~~--~~~g~~VLDiGcGs-G~l~i~aa~-~g~~V~gvDis~~av~~A~~n  161 (254)
T d2nxca1          88 EIPLVIEPGMAFGTGHHET-T-RLALKALARH--LRPGDKVLDLGTGS-GVLAIAAEK-LGGKALGVDIDPMVLPQAEAN  161 (254)
T ss_dssp             SEEEECCCC-----CCSHH-H-HHHHHHHHHH--CCTTCEEEEETCTT-SHHHHHHHH-TTCEEEEEESCGGGHHHHHHH
T ss_pred             ceEEEEccccccCccccch-h-hHHHHHHHhh--cCccCEEEEcccch-hHHHHHHHh-cCCEEEEEECChHHHHHHHHH
Confidence            4567777777765543111 1 1113334443  47999999999864 666665554 6899999999887654442  


Q ss_pred             -HHcCCCEEecCCCHHHHHHhcCCccEEEEcCCCcc---cHHHHHhccccCCEEEEec
Q 018067          225 -ERLGADSFLVSRDQDEMQAAMGTMDGIIDTVSAVH---PLMPLIGLLKSQGKLVLVG  278 (361)
Q Consensus       225 -~~~g~~~vv~~~~~~~~~~~~~g~d~vid~~g~~~---~~~~~~~~l~~~G~~v~~g  278 (361)
                       +..|.+..+...+... ....+.+|+|+-+.....   .+....+.|+|||+++..|
T Consensus       162 a~~n~~~~~~~~~d~~~-~~~~~~fD~V~ani~~~~l~~l~~~~~~~LkpGG~lilSg  218 (254)
T d2nxca1         162 AKRNGVRPRFLEGSLEA-ALPFGPFDLLVANLYAELHAALAPRYREALVPGGRALLTG  218 (254)
T ss_dssp             HHHTTCCCEEEESCHHH-HGGGCCEEEEEEECCHHHHHHHHHHHHHHEEEEEEEEEEE
T ss_pred             HHHcCCceeEEeccccc-cccccccchhhhccccccHHHHHHHHHHhcCCCcEEEEEe
Confidence             2345432222222221 112357999987654322   2445778899999999765

>d1r0ka2 c.2.1.3 (A:3-126,A:265-290) 1-deoxy-D-xylulose-5-phosphate reductoisomerase {Zymomonas mobilis [TaxId: 542]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Glyceraldehyde-3-phosphate dehydrogenase-like, N-terminal domain
domain: 1-deoxy-D-xylulose-5-phosphate reductoisomerase
species: Zymomonas mobilis [TaxId: 542]

Probab=96.54  E-value=0.018  Score=43.64  Aligned_cols=94  Identities=16%  Similarity=0.273  Sum_probs=68.7

Q ss_pred             CCEEEEEcC-ChHHHHHHHHHHHc--CCeEEEEe--CCchhHHHHHHHcCCCEEecCCCH--HH----------------
Q 018067          184 GMHVGVVGL-GGLGHVAVKFAKAM--GVKVTVIS--TSPSKKSEAIERLGADSFLVSRDQ--DE----------------  240 (361)
Q Consensus       184 g~~vlV~Ga-g~vG~~a~~la~~~--g~~vi~~~--~~~~~~~~~~~~~g~~~vv~~~~~--~~----------------  240 (361)
                      .++|.|+|+ |.||..+..+.+..  .++|+.+.  ++-+.+.+.+++|....++..++.  +.                
T Consensus         2 pK~I~IlGsTGSIG~~tL~Vi~~~~d~f~v~~lsa~~N~~~L~~q~~ef~Pk~v~i~d~~~~~~l~~~~~~~~~~v~~g~   81 (150)
T d1r0ka2           2 PRTVTVLGATGSIGHSTLDLIERNLDRYQVIALTANRNVKDLADAAKRTNAKRAVIADPSLYNDLKEALAGSSVEAAAGA   81 (150)
T ss_dssp             CEEEEEETTTSHHHHHHHHHHHHTGGGEEEEEEEESSCHHHHHHHHHHTTCSEEEESCGGGHHHHHHHTTTCSSEEEESH
T ss_pred             CcEEEEECCCcHHHHHHHHHHHcCCCCcEEEEEEeCCCHHHHHHHHHhhccccceeccHHHHHHHHHHhhhcccccccCc
Confidence            378999998 99999999999986  45776655  444667777889988766544332  11                


Q ss_pred             --HHHh-cCCccEEEEcCCCcccHHHHHhccccCCEEEEe
Q 018067          241 --MQAA-MGTMDGIIDTVSAVHPLMPLIGLLKSQGKLVLV  277 (361)
Q Consensus       241 --~~~~-~~g~d~vid~~g~~~~~~~~~~~l~~~G~~v~~  277 (361)
                        +.++ ...+|+++.++.+..++...+..++.+-++.+-
T Consensus        82 ~~l~~~~~~~~D~vv~Ai~G~~GL~~tl~ai~~gk~iaLA  121 (150)
T d1r0ka2          82 DALVEAAMMGADWTMAAIIGCAGLKATLAAIRKGKTVALA  121 (150)
T ss_dssp             HHHHHHHTSCCSEEEECCCSGGGHHHHHHHHHTTSEEEEC
T ss_pred             cchheecccccceeeeecCchhHHHHHHHHHhcCCEEEEe
Confidence              1111 126899999988888899999999888776554

>d1g8aa_ c.66.1.3 (A:) Fibrillarin homologue {Archaeon Pyrococcus horikoshii [TaxId: 53953]}

class: Alpha and beta proteins (a/b)
fold: S-adenosyl-L-methionine-dependent methyltransferases
superfamily: S-adenosyl-L-methionine-dependent methyltransferases
family: Fibrillarin homologue
domain: Fibrillarin homologue
species: Archaeon Pyrococcus horikoshii [TaxId: 53953]

Probab=96.54  E-value=0.0037  Score=51.34  Aligned_cols=101  Identities=22%  Similarity=0.223  Sum_probs=68.4

Q ss_pred             hhhcCCCCCCCEEEEEcCChHHHHHHHHHHHcCC--eEEEEeCCchhHHHHHHHcC---CC-EE-ecCCCHHHHHHhcCC
Q 018067          175 LRFYGLDKPGMHVGVVGLGGLGHVAVKFAKAMGV--KVTVISTSPSKKSEAIERLG---AD-SF-LVSRDQDEMQAAMGT  247 (361)
Q Consensus       175 l~~~~~~~~g~~vlV~Gag~vG~~a~~la~~~g~--~vi~~~~~~~~~~~~~~~~g---~~-~v-v~~~~~~~~~~~~~g  247 (361)
                      +.... ++||++||=+|+|. |..+..+++..|-  +|+.++.+++..+.+.+...   .. .+ .+...++........
T Consensus        66 l~~l~-i~pG~~VLDlGaGs-G~~t~~la~~VG~~G~V~aVD~s~~~l~~a~~~a~~~~~~~~i~~d~~~~~~~~~~~~~  143 (227)
T d1g8aa_          66 LKNFP-IKPGKSVLYLGIAS-GTTASHVSDIVGWEGKIFGIEFSPRVLRELVPIVEERRNIVPILGDATKPEEYRALVPK  143 (227)
T ss_dssp             CCCCC-CCTTCEEEEETTTS-TTHHHHHHHHHCTTSEEEEEESCHHHHHHHHHHHSSCTTEEEEECCTTCGGGGTTTCCC
T ss_pred             ccccc-cCCCCEEEEeccCC-CHHHHHHHHHhCCCCEEEEEeCcHHHHHHHHHHHHhcCCceEEEEECCCcccccccccc
Confidence            44443 79999999999875 8889999999863  89999999877666644332   11 11 122333333333357


Q ss_pred             ccEEEEcCCCc----ccHHHHHhccccCCEEEEe
Q 018067          248 MDGIIDTVSAV----HPLMPLIGLLKSQGKLVLV  277 (361)
Q Consensus       248 ~d~vid~~g~~----~~~~~~~~~l~~~G~~v~~  277 (361)
                      +|+++..+...    ..+..+.+.|+++|+++..
T Consensus       144 vD~i~~d~~~~~~~~~~l~~~~~~LkpgG~lvi~  177 (227)
T d1g8aa_         144 VDVIFEDVAQPTQAKILIDNAEVYLKRGGYGMIA  177 (227)
T ss_dssp             EEEEEECCCSTTHHHHHHHHHHHHEEEEEEEEEE
T ss_pred             eEEEEEEccccchHHHHHHHHHHhcccCCeEEEE
Confidence            89888765543    2366788899999998865

>d1ps9a3 c.4.1.1 (A:331-465,A:628-671) 2,4-dienoyl-CoA reductase, middle domain {Escherichia coli [TaxId: 562]}

class: Alpha and beta proteins (a/b)
fold: Nucleotide-binding domain
superfamily: Nucleotide-binding domain
family: N-terminal domain of adrenodoxin reductase-like
domain: 2,4-dienoyl-CoA reductase, middle domain
species: Escherichia coli [TaxId: 562]

Probab=96.52  E-value=0.0078  Score=47.36  Aligned_cols=36  Identities=28%  Similarity=0.291  Sum_probs=33.2

Q ss_pred             CCCCEEEEEcCChHHHHHHHHHHHcCCeEEEEeCCc
Q 018067          182 KPGMHVGVVGLGGLGHVAVKFAKAMGVKVTVISTSP  217 (361)
Q Consensus       182 ~~g~~vlV~Gag~vG~~a~~la~~~g~~vi~~~~~~  217 (361)
                      ..+++|+|+|+|+.|+.++..|..+|.+|+++...+
T Consensus        41 ~~~k~V~IIGaGPAGL~AA~~la~~G~~Vtl~E~~~   76 (179)
T d1ps9a3          41 VQKKNLAVVGAGPAGLAFAINAAARGHQVTLFDAHS   76 (179)
T ss_dssp             SSCCEEEEECCSHHHHHHHHHHHTTTCEEEEEESSS
T ss_pred             CCCcEEEEECccHHHHHHHHHHHhhccceEEEeccC
Confidence            567899999999999999999999999999998865

>d2pd4a1 c.2.1.2 (A:2-275) Enoyl-ACP reductase {Helicobacter pylori [TaxId: 210]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Tyrosine-dependent oxidoreductases
domain: Enoyl-ACP reductase
species: Helicobacter pylori [TaxId: 210]

Probab=96.39  E-value=0.0083  Score=50.51  Aligned_cols=76  Identities=14%  Similarity=0.189  Sum_probs=52.0

Q ss_pred             CCCCEEEEEcC-C--hHHHHHHHHHHHcCCeEEEEeCCch---hHHHHHHHcCCCE--EecCCCHHHHH-------HhcC
Q 018067          182 KPGMHVGVVGL-G--GLGHVAVKFAKAMGVKVTVISTSPS---KKSEAIERLGADS--FLVSRDQDEMQ-------AAMG  246 (361)
Q Consensus       182 ~~g~~vlV~Ga-g--~vG~~a~~la~~~g~~vi~~~~~~~---~~~~~~~~~g~~~--vv~~~~~~~~~-------~~~~  246 (361)
                      -+|+++||.|+ |  +||.++++.+...|++|++++++++   +.+++.++.+...  ..+..+++...       +..+
T Consensus         3 L~gK~alITGaag~~GIG~AiA~~la~~Ga~V~i~~r~~~~~~~~~~l~~~~~~~~~~~~d~~~~~~~~~~~~~~~~~~g   82 (274)
T d2pd4a1           3 LKGKKGLIVGVANNKSIAYGIAQSCFNQGATLAFTYLNESLEKRVRPIAQELNSPYVYELDVSKEEHFKSLYNSVKKDLG   82 (274)
T ss_dssp             TTTCEEEEECCCSTTSHHHHHHHHHHTTTCEEEEEESSTTTHHHHHHHHHHTTCCCEEECCTTCHHHHHHHHHHHHHHTS
T ss_pred             CCCCEEEEECCCCCcHHHHHHHHHHHHCCCEEEEEeCCHHHHHHHHHHHhhCCceeEeeecccchhhHHHHHHHHHHHcC
Confidence            35899999986 5  6999999999999999999998863   3333433333222  23344433222       2235


Q ss_pred             CccEEEEcCCC
Q 018067          247 TMDGIIDTVSA  257 (361)
Q Consensus       247 g~d~vid~~g~  257 (361)
                      .+|+++.++|.
T Consensus        83 ~id~lV~nag~   93 (274)
T d2pd4a1          83 SLDFIVHSVAF   93 (274)
T ss_dssp             CEEEEEECCCC
T ss_pred             CCCeEEeeccc
Confidence            79999999885

>d1nkva_ c.66.1.21 (A:) Hypothetical Protein YjhP {Escherichia coli [TaxId: 562]}

class: Alpha and beta proteins (a/b)
fold: S-adenosyl-L-methionine-dependent methyltransferases
superfamily: S-adenosyl-L-methionine-dependent methyltransferases
family: Hypothetical Protein YjhP
domain: Hypothetical Protein YjhP
species: Escherichia coli [TaxId: 562]

Probab=96.38  E-value=0.0052  Score=50.96  Aligned_cols=104  Identities=23%  Similarity=0.229  Sum_probs=67.8

Q ss_pred             hhHhhhcCCCCCCCEEEEEcCChHHHHHHHHHHHcCCeEEEEeCCchhHHHH---HHHcCCC--EEecCCCHHHHHHhcC
Q 018067          172 YSPLRFYGLDKPGMHVGVVGLGGLGHVAVKFAKAMGVKVTVISTSPSKKSEA---IERLGAD--SFLVSRDQDEMQAAMG  246 (361)
Q Consensus       172 ~~~l~~~~~~~~g~~vlV~Gag~vG~~a~~la~~~g~~vi~~~~~~~~~~~~---~~~~g~~--~vv~~~~~~~~~~~~~  246 (361)
                      +..+-....+++|++||=+|+|. |..+..+++..|++|+.++-+++..+..   +++.|..  .-+...+.... ...+
T Consensus        22 ~~~l~~~~~l~pg~~VLDiGCG~-G~~~~~la~~~~~~v~GvD~s~~~~~~ar~~~~~~gl~~~v~~~~~d~~~~-~~~~   99 (245)
T d1nkva_          22 YATLGRVLRMKPGTRILDLGSGS-GEMLCTWARDHGITGTGIDMSSLFTAQAKRRAEELGVSERVHFIHNDAAGY-VANE   99 (245)
T ss_dssp             HHHHHHHTCCCTTCEEEEETCTT-CHHHHHHHHHTCCEEEEEESCHHHHHHHHHHHHHTTCTTTEEEEESCCTTC-CCSS
T ss_pred             HHHHHHHcCCCCCCEEEEEcCCC-CHHHHHHHHhcCCEEEEEecccchhhHHHHHHHHhhccccchhhhhHHhhc-cccC
Confidence            44466677789999999999864 5667788888899999999987654332   3344542  11222221111 1234


Q ss_pred             CccEEEEcCC------CcccHHHHHhccccCCEEEEe
Q 018067          247 TMDGIIDTVS------AVHPLMPLIGLLKSQGKLVLV  277 (361)
Q Consensus       247 g~d~vid~~g------~~~~~~~~~~~l~~~G~~v~~  277 (361)
                      .||.|+-.-.      -...+..+.+.|+|||+++..
T Consensus       100 ~fD~v~~~~~~~~~~d~~~~l~~~~r~LkPGG~l~i~  136 (245)
T d1nkva_         100 KCDVAACVGATWIAGGFAGAEELLAQSLKPGGIMLIG  136 (245)
T ss_dssp             CEEEEEEESCGGGTSSSHHHHHHHTTSEEEEEEEEEE
T ss_pred             ceeEEEEEehhhccCCHHHHHHHHHHHcCcCcEEEEE
Confidence            7998875322      134567788999999999875

>d1a4ia1 c.2.1.7 (A:127-296) Methylenetetrahydrofolate dehydrogenase/cyclohydrolase {Human (Homo sapiens) [TaxId: 9606]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Aminoacid dehydrogenase-like, C-terminal domain
domain: Methylenetetrahydrofolate dehydrogenase/cyclohydrolase
species: Human (Homo sapiens) [TaxId: 9606]

Probab=96.36  E-value=0.013  Score=45.45  Aligned_cols=97  Identities=14%  Similarity=0.109  Sum_probs=76.2

Q ss_pred             ccccchhhhhhhhHhhhcCCCCCCCEEEEEcC-ChHHHHHHHHHHHcCCeEEEEeCCchhHHHHHHHcCCCEEecCCCHH
Q 018067          161 TAPLLCAGITVYSPLRFYGLDKPGMHVGVVGL-GGLGHVAVKFAKAMGVKVTVISTSPSKKSEAIERLGADSFLVSRDQD  239 (361)
Q Consensus       161 aa~l~~~~~ta~~~l~~~~~~~~g~~vlV~Ga-g~vG~~a~~la~~~g~~vi~~~~~~~~~~~~~~~~g~~~vv~~~~~~  239 (361)
                      -+.+||+..+.+..+++..---.|++|+|+|. ..+|.-.+.++...|++|+.+.+......+                 
T Consensus        16 ~~~~PcTp~aii~lL~~~~i~l~Gk~vvVIGrS~iVGrPLa~lL~~~gatVt~~~~~t~~l~~-----------------   78 (170)
T d1a4ia1          16 DCFIPCTPKGCLELIKETGVPIAGRHAVVVGRSKIVGAPMHDLLLWNNATVTTCHSKTAHLDE-----------------   78 (170)
T ss_dssp             SCCCCHHHHHHHHHHHTTTCCCTTCEEEEECCCTTTHHHHHHHHHHTTCEEEEECTTCSSHHH-----------------
T ss_pred             CCCCCChHHHHHHHHHHhCcccccceEEEEecCCccchHHHHHHHhccCceEEEecccccHHH-----------------
Confidence            35678888888888888876568999999997 779999999999999999987765543322                 


Q ss_pred             HHHHhcCCccEEEEcCCCcccHHHHHhccccCCEEEEecCC
Q 018067          240 EMQAAMGTMDGIIDTVSAVHPLMPLIGLLKSQGKLVLVGAP  280 (361)
Q Consensus       240 ~~~~~~~g~d~vid~~g~~~~~~~~~~~l~~~G~~v~~g~~  280 (361)
                          .....|+++-++|.+..+.  -+.++++-.++++|..
T Consensus        79 ----~~~~aDivi~a~G~~~~i~--~~~vk~g~iviDvgi~  113 (170)
T d1a4ia1          79 ----EVNKGDILVVATGQPEMVK--GEWIKPGAIVIDCGIN  113 (170)
T ss_dssp             ----HHTTCSEEEECCCCTTCBC--GGGSCTTCEEEECCCB
T ss_pred             ----HHhhccchhhccccccccc--cccccCCCeEeccCcc
Confidence                2235789999999877332  5688899999999863

>d1kpia_ c.66.1.18 (A:) CmaA2 {Mycobacterium tuberculosis [TaxId: 1773]}

class: Alpha and beta proteins (a/b)
fold: S-adenosyl-L-methionine-dependent methyltransferases
superfamily: S-adenosyl-L-methionine-dependent methyltransferases
family: Mycolic acid cyclopropane synthase
domain: CmaA2
species: Mycobacterium tuberculosis [TaxId: 1773]

Probab=96.34  E-value=0.0088  Score=50.98  Aligned_cols=102  Identities=14%  Similarity=0.108  Sum_probs=66.9

Q ss_pred             hhHhhhcCCCCCCCEEEEEcCChHHHHHHHHHHHcCCeEEEEeCCchhHHHH---HHHcCCCE--EecCCCHHHHHHhcC
Q 018067          172 YSPLRFYGLDKPGMHVGVVGLGGLGHVAVKFAKAMGVKVTVISTSPSKKSEA---IERLGADS--FLVSRDQDEMQAAMG  246 (361)
Q Consensus       172 ~~~l~~~~~~~~g~~vlV~Gag~vG~~a~~la~~~g~~vi~~~~~~~~~~~~---~~~~g~~~--vv~~~~~~~~~~~~~  246 (361)
                      +..+-....+++|++||=+|+|- |-.+..+|+..|++|+.++.+++.....   ++..|...  .+...+.   ....+
T Consensus        50 ~~~~~~~l~l~~G~~VLDiGCG~-G~~~~~~a~~~g~~v~git~s~~q~~~a~~~~~~~~l~~~v~~~~~d~---~~~~~  125 (291)
T d1kpia_          50 RKLALDKLNLEPGMTLLDIGCGW-GSTMRHAVAEYDVNVIGLTLSENQYAHDKAMFDEVDSPRRKEVRIQGW---EEFDE  125 (291)
T ss_dssp             HHHHHHTTCCCTTCEEEEETCTT-SHHHHHHHHHHCCEEEEEESCHHHHHHHHHHHHHSCCSSCEEEEECCG---GGCCC
T ss_pred             HHHHHHhcCCCCCCEEEEecCcc-hHHHHHHHHhcCcceeeccchHHHHHHHHHHHHhhccchhhhhhhhcc---ccccc
Confidence            33344556689999999999864 4457789999999999999888754333   33445432  1112221   12345


Q ss_pred             CccEEEEc-----CCC----------cccHHHHHhccccCCEEEEe
Q 018067          247 TMDGIIDT-----VSA----------VHPLMPLIGLLKSQGKLVLV  277 (361)
Q Consensus       247 g~d~vid~-----~g~----------~~~~~~~~~~l~~~G~~v~~  277 (361)
                      .||.|+..     ++.          ...+..+.++|+|||+++.-
T Consensus       126 ~fD~i~sie~~eH~~~~~~~~~~~~~~~~f~~i~~~LkpgG~~~l~  171 (291)
T d1kpia_         126 PVDRIVSLGAFEHFADGAGDAGFERYDTFFKKFYNLTPDDGRMLLH  171 (291)
T ss_dssp             CCSEEEEESCGGGTTCCSSCCSTTHHHHHHHHHHHTSCTTCEEEEE
T ss_pred             ccceEeechhHHhcchhhhhhHHHHHHHHHHHHHHhCCCCCceEEE
Confidence            79988653     222          13467789999999999864

>d1yqga2 c.2.1.6 (A:1-152) Pyrroline-5-carboxylate reductase ProC {Neisseria meningitidis, serogroup B [TaxId: 487]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: 6-phosphogluconate dehydrogenase-like, N-terminal domain
domain: Pyrroline-5-carboxylate reductase ProC
species: Neisseria meningitidis, serogroup B [TaxId: 487]

Probab=96.31  E-value=0.015  Score=44.22  Aligned_cols=82  Identities=17%  Similarity=0.273  Sum_probs=57.2

Q ss_pred             EEEEEcCChHHHHHHH-HHHHcCCeEEEEeCCchhHHHHHHHcCCCEEecCCCHHHHHHhcCCccEEEEcCCCcccHHHH
Q 018067          186 HVGVVGLGGLGHVAVK-FAKAMGVKVTVISTSPSKKSEAIERLGADSFLVSRDQDEMQAAMGTMDGIIDTVSAVHPLMPL  264 (361)
Q Consensus       186 ~vlV~Gag~vG~~a~~-la~~~g~~vi~~~~~~~~~~~~~~~~g~~~vv~~~~~~~~~~~~~g~d~vid~~g~~~~~~~~  264 (361)
                      +|.++|+|.+|.+.+. +++.-+.++++.++++++...+.+++|.... +..+     + ....|+||=++--.. +...
T Consensus         2 kI~fIG~G~MG~ai~~~l~~~~~~~i~v~~r~~~~~~~l~~~~~~~~~-~~~~-----~-v~~~Div~lavkP~~-~~~v   73 (152)
T d1yqga2           2 NVYFLGGGNMAAAVAGGLVKQGGYRIYIANRGAEKRERLEKELGVETS-ATLP-----E-LHSDDVLILAVKPQD-MEAA   73 (152)
T ss_dssp             EEEEECCSHHHHHHHHHHHHHCSCEEEEECSSHHHHHHHHHHTCCEEE-SSCC-----C-CCTTSEEEECSCHHH-HHHH
T ss_pred             EEEEEcCcHHHHHHHHHHHHCCCCcEEEEeCChhHHHHhhhhcccccc-cccc-----c-ccccceEEEecCHHH-HHHh
Confidence            5788999999998877 5555447999999999999888888886532 2111     1 134789988776333 6666


Q ss_pred             HhccccCCEEE
Q 018067          265 IGLLKSQGKLV  275 (361)
Q Consensus       265 ~~~l~~~G~~v  275 (361)
                      ++-+++.++++
T Consensus        74 ~~~l~~~~~~v   84 (152)
T d1yqga2          74 CKNIRTNGALV   84 (152)
T ss_dssp             HTTCCCTTCEE
T ss_pred             HHHHhhcccEE
Confidence            66666555444

>d1oaaa_ c.2.1.2 (A:) Sepiapterin reductase {Mouse (Mus musculus) [TaxId: 10090]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Tyrosine-dependent oxidoreductases
domain: Sepiapterin reductase
species: Mouse (Mus musculus) [TaxId: 10090]

Probab=96.30  E-value=0.0069  Score=50.70  Aligned_cols=75  Identities=16%  Similarity=0.089  Sum_probs=50.6

Q ss_pred             CCCEEEEEcC-ChHHHHHHHHH-HH--cCCeEEEEeCCchhHHHHHHHcC-----CC---EEecCCCHHHHHHhc-----
Q 018067          183 PGMHVGVVGL-GGLGHVAVKFA-KA--MGVKVTVISTSPSKKSEAIERLG-----AD---SFLVSRDQDEMQAAM-----  245 (361)
Q Consensus       183 ~g~~vlV~Ga-g~vG~~a~~la-~~--~g~~vi~~~~~~~~~~~~~~~~g-----~~---~vv~~~~~~~~~~~~-----  245 (361)
                      .|+.++|.|+ +++|.++++.+ +.  .|++|+++++++++.+++.+++.     ..   ...|-.+++.++++.     
T Consensus         5 ~gKvalITGas~GIG~aiA~~lA~~~~~G~~Vv~~~r~~~~l~~~~~~l~~~~~~~~~~~~~~Dvs~~~~v~~l~~~~~~   84 (259)
T d1oaaa_           5 GCAVCVLTGASRGFGRALAPQLARLLSPGSVMLVSARSESMLRQLKEELGAQQPDLKVVLAAADLGTEAGVQRLLSAVRE   84 (259)
T ss_dssp             BSEEEEESSCSSHHHHHHHHHHHTTBCTTCEEEEEESCHHHHHHHHHHHHHHCTTSEEEEEECCTTSHHHHHHHHHHHHH
T ss_pred             CCCEEEEeCCCCHHHHHHHHHHHhcccCCCEEEEEECCHHHHHHHHHHHHhhcCCceEEEEEccCCCHHHHHHHHHHHHH
Confidence            5677788887 89999887655 43  69999999999988877766542     22   123555554433321     


Q ss_pred             ------CCccEEEEcCCC
Q 018067          246 ------GTMDGIIDTVSA  257 (361)
Q Consensus       246 ------~g~d~vid~~g~  257 (361)
                            ...|++++++|.
T Consensus        85 ~~~~~~~~~~~lvnnag~  102 (259)
T d1oaaa_          85 LPRPEGLQRLLLINNAAT  102 (259)
T ss_dssp             SCCCTTCCEEEEEECCCC
T ss_pred             hhhhccCceEEEEecccc
Confidence                  147888988763

>d1o54a_ c.66.1.13 (A:) Hypothetical protein TM0748 {Thermotoga maritima [TaxId: 2336]}

class: Alpha and beta proteins (a/b)
fold: S-adenosyl-L-methionine-dependent methyltransferases
superfamily: S-adenosyl-L-methionine-dependent methyltransferases
family: tRNA(1-methyladenosine) methyltransferase-like
domain: Hypothetical protein TM0748
species: Thermotoga maritima [TaxId: 2336]

Probab=96.29  E-value=0.0046  Score=52.09  Aligned_cols=98  Identities=20%  Similarity=0.154  Sum_probs=67.2

Q ss_pred             cCCCCCCCEEEEEcCChHHHHHHHHHHHcC--CeEEEEeCCchhHHHHH---HHcCCC--EEecCCCHHHHHHhc-CCcc
Q 018067          178 YGLDKPGMHVGVVGLGGLGHVAVKFAKAMG--VKVTVISTSPSKKSEAI---ERLGAD--SFLVSRDQDEMQAAM-GTMD  249 (361)
Q Consensus       178 ~~~~~~g~~vlV~Gag~vG~~a~~la~~~g--~~vi~~~~~~~~~~~~~---~~~g~~--~vv~~~~~~~~~~~~-~g~d  249 (361)
                      ...+++|++||=.|+|. |.+++.+|+..|  .+|+.++.+++..+.+.   +.+|..  ..+...+.  ..... ..+|
T Consensus        98 ~l~i~pG~~VLDiG~Gs-G~lt~~lA~~~~~~G~V~~vD~~~~~~~~A~~~~~~~g~~~~v~~~~~d~--~~~~~~~~~D  174 (266)
T d1o54a_          98 MLDVKEGDRIIDTGVGS-GAMCAVLARAVGSSGKVFAYEKREEFAKLAESNLTKWGLIERVTIKVRDI--SEGFDEKDVD  174 (266)
T ss_dssp             HTTCCTTCEEEEECCTT-SHHHHHHHHHTTTTCEEEEECCCHHHHHHHHHHHHHTTCGGGEEEECCCG--GGCCSCCSEE
T ss_pred             hhCCCCCCEEEECCCCC-CHHHHHHHHHhCCCcEEEEEeCCHHHHHHHHHHHHHhccccCcEEEeccc--ccccccccee
Confidence            45589999999999876 777888899875  58999999887654442   344542  22222221  11122 2588


Q ss_pred             EEEEcCCCc-ccHHHHHhccccCCEEEEec
Q 018067          250 GIIDTVSAV-HPLMPLIGLLKSQGKLVLVG  278 (361)
Q Consensus       250 ~vid~~g~~-~~~~~~~~~l~~~G~~v~~g  278 (361)
                      .||--...+ ..+..+.+.|+|||+++.+.
T Consensus       175 ~V~~d~p~p~~~l~~~~~~LKpGG~lv~~~  204 (266)
T d1o54a_         175 ALFLDVPDPWNYIDKCWEALKGGGRFATVC  204 (266)
T ss_dssp             EEEECCSCGGGTHHHHHHHEEEEEEEEEEE
T ss_pred             eeEecCCCHHHHHHHHHhhcCCCCEEEEEe
Confidence            877666653 56889999999999998763

>d1kpga_ c.66.1.18 (A:) CmaA1 {Mycobacterium tuberculosis [TaxId: 1773]}

class: Alpha and beta proteins (a/b)
fold: S-adenosyl-L-methionine-dependent methyltransferases
superfamily: S-adenosyl-L-methionine-dependent methyltransferases
family: Mycolic acid cyclopropane synthase
domain: CmaA1
species: Mycobacterium tuberculosis [TaxId: 1773]

Probab=96.28  E-value=0.0059  Score=51.92  Aligned_cols=100  Identities=16%  Similarity=0.102  Sum_probs=66.7

Q ss_pred             hHhhhcCCCCCCCEEEEEcCChHHHHHHHHHHHcCCeEEEEeCCchhHHHHHH---HcCC-C-EEecCCCHHHHHHhcCC
Q 018067          173 SPLRFYGLDKPGMHVGVVGLGGLGHVAVKFAKAMGVKVTVISTSPSKKSEAIE---RLGA-D-SFLVSRDQDEMQAAMGT  247 (361)
Q Consensus       173 ~~l~~~~~~~~g~~vlV~Gag~vG~~a~~la~~~g~~vi~~~~~~~~~~~~~~---~~g~-~-~vv~~~~~~~~~~~~~g  247 (361)
                      ..+-+..++++|++||=+|+|- |..++.+|+..|++|+.++.+++..+.+.+   +.|. + ..+...+.   ..+.+.
T Consensus        52 ~~~~~~l~l~~G~~VLDiGCG~-G~~a~~~a~~~g~~v~git~s~~Q~~~a~~~~~~~g~~~~v~~~~~d~---~~~~~~  127 (285)
T d1kpga_          52 DLALGKLGLQPGMTLLDVGCGW-GATMMRAVEKYDVNVVGLTLSKNQANHVQQLVANSENLRSKRVLLAGW---EQFDEP  127 (285)
T ss_dssp             HHHHTTTTCCTTCEEEEETCTT-SHHHHHHHHHHCCEEEEEESCHHHHHHHHHHHHTCCCCSCEEEEESCG---GGCCCC
T ss_pred             HHHHHHcCCCCCCEEEEecCcc-hHHHHHHHhcCCcceEEEeccHHHHHHHHHHHHhhhhhhhhHHHHhhh---hccccc
Confidence            3344556689999999999874 677888999999999999999876554433   3332 1 11122221   223456


Q ss_pred             ccEEEE-----cCCCc---ccHHHHHhccccCCEEEE
Q 018067          248 MDGIID-----TVSAV---HPLMPLIGLLKSQGKLVL  276 (361)
Q Consensus       248 ~d~vid-----~~g~~---~~~~~~~~~l~~~G~~v~  276 (361)
                      +|.|+.     .++..   ..+..+.+.|+|+|+++.
T Consensus       128 fD~i~si~~~eh~~~~~~~~~~~~~~r~LkpgG~~~l  164 (285)
T d1kpga_         128 VDRIVSIGAFEHFGHERYDAFFSLAHRLLPADGVMLL  164 (285)
T ss_dssp             CSEEEEESCGGGTCTTTHHHHHHHHHHHSCTTCEEEE
T ss_pred             ccceeeehhhhhcCchhHHHHHHHHHhhcCCCCcEEE
Confidence            887654     33332   346678889999999986

>d2bzga1 c.66.1.36 (A:17-245) Thiopurine S-methyltransferase {Human (Homo sapiens) [TaxId: 9606]}

class: Alpha and beta proteins (a/b)
fold: S-adenosyl-L-methionine-dependent methyltransferases
superfamily: S-adenosyl-L-methionine-dependent methyltransferases
family: Thiopurine S-methyltransferase
domain: Thiopurine S-methyltransferase
species: Human (Homo sapiens) [TaxId: 9606]

Probab=96.21  E-value=0.0047  Score=50.68  Aligned_cols=99  Identities=20%  Similarity=0.061  Sum_probs=64.8

Q ss_pred             CCCCCCCEEEEEcCChHHHHHHHHHHHcCCeEEEEeCCchhHHHHHHHcCCCEEe------------cC---------CC
Q 018067          179 GLDKPGMHVGVVGLGGLGHVAVKFAKAMGVKVTVISTSPSKKSEAIERLGADSFL------------VS---------RD  237 (361)
Q Consensus       179 ~~~~~g~~vlV~Gag~vG~~a~~la~~~g~~vi~~~~~~~~~~~~~~~~g~~~vv------------~~---------~~  237 (361)
                      ...+++.+||..|+|. |..+..+|+ .|++|+.++-+++..+.+.++.+.....            ..         .+
T Consensus        41 l~~~~~~rvLd~GCG~-G~~a~~LA~-~G~~V~gvD~S~~ai~~a~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~d  118 (229)
T d2bzga1          41 LKGKSGLRVFFPLCGK-AVEMKWFAD-RGHSVVGVEISELGIQEFFTEQNLSYSEEPITEIPGTKVFKSSSGNISLYCCS  118 (229)
T ss_dssp             HTTCCSCEEEETTCTT-CTHHHHHHH-TTCEEEEECSCHHHHHHHHHHTTCCEEEEECTTSTTCEEEEETTSSEEEEESC
T ss_pred             cCCCCCCEEEEeCCCC-cHHHHHHHh-CCCcEEEEeCCHHHHHHHHHHhhccccccchhcccccceeeecCCcEEEEEcc
Confidence            3467899999999876 777777776 5999999999998777665555432110            00         00


Q ss_pred             -HHHHHHhcCCccEEEEcCCCc--------ccHHHHHhccccCCEEEEecC
Q 018067          238 -QDEMQAAMGTMDGIIDTVSAV--------HPLMPLIGLLKSQGKLVLVGA  279 (361)
Q Consensus       238 -~~~~~~~~~g~d~vid~~g~~--------~~~~~~~~~l~~~G~~v~~g~  279 (361)
                       .+......+.+|+|+++..-.        ..+....++|+|+|+++....
T Consensus       119 ~~~l~~~~~~~fd~i~~~~~l~~~~~~~r~~~~~~~~~~LkpgG~~~l~~~  169 (229)
T d2bzga1         119 IFDLPRTNIGKFDMIWDRGALVAINPGDRKCYADTMFSLLGKKFQYLLCVL  169 (229)
T ss_dssp             GGGGGGSCCCCEEEEEESSSTTTSCGGGHHHHHHHHHHTEEEEEEEEEEEE
T ss_pred             hhhccccccCceeEEEEEEEEEeccchhhHHHHHHHHhhcCCcceEEEEEc
Confidence             011111223689999865421        235678899999999876643

>d2q46a1 c.2.1.2 (A:2-253) Hypothetical protein At5g02240 (T7H20_290) {Thale cress (Arabidopsis thaliana) [TaxId: 3702]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Tyrosine-dependent oxidoreductases
domain: Hypothetical protein At5g02240 (T7H20 290)
species: Thale cress (Arabidopsis thaliana) [TaxId: 3702]

Probab=96.16  E-value=0.0072  Score=49.15  Aligned_cols=71  Identities=24%  Similarity=0.175  Sum_probs=51.0

Q ss_pred             CEEEEEcC-ChHHHHHHHHHHHcCC--eEEEEeCCchhHHHHHHHcCCCE-EecCCCHHHHHHhcCCccEEEEcCCC
Q 018067          185 MHVGVVGL-GGLGHVAVKFAKAMGV--KVTVISTSPSKKSEAIERLGADS-FLVSRDQDEMQAAMGTMDGIIDTVSA  257 (361)
Q Consensus       185 ~~vlV~Ga-g~vG~~a~~la~~~g~--~vi~~~~~~~~~~~~~~~~g~~~-vv~~~~~~~~~~~~~g~d~vid~~g~  257 (361)
                      .+|||.|+ |.+|..++..+...|.  .|+.+.++.++...+  .-+... ..|..+.+...++..++|.|+.+++.
T Consensus         4 ~tVlVtGatG~iG~~l~~~Ll~~g~~v~v~~~~R~~~~~~~~--~~~~~~~~~d~~~~~~~~~~~~~~d~vi~~a~~   78 (252)
T d2q46a1           4 PTVLVTGASGRTGQIVYKKLKEGSDKFVAKGLVRSAQGKEKI--GGEADVFIGDITDADSINPAFQGIDALVILTSA   78 (252)
T ss_dssp             CEEEEESTTSTTHHHHHHHHHHTTTTCEEEEEESCHHHHHHT--TCCTTEEECCTTSHHHHHHHHTTCSEEEECCCC
T ss_pred             CEEEEECCccHHHHHHHHHHHHCCCcEEEEEEcCCHHHHHhc--cCCcEEEEeeeccccccccccccceeeEEEEee
Confidence            58999997 9999999999988885  566666776554332  123332 33556667777777899999998875

>d2fk8a1 c.66.1.18 (A:22-301) Methoxy mycolic acid synthase 4, Mma4 {Mycobacterium tuberculosis [TaxId: 1773]}

class: Alpha and beta proteins (a/b)
fold: S-adenosyl-L-methionine-dependent methyltransferases
superfamily: S-adenosyl-L-methionine-dependent methyltransferases
family: Mycolic acid cyclopropane synthase
domain: Methoxy mycolic acid synthase 4, Mma4
species: Mycobacterium tuberculosis [TaxId: 1773]

Probab=96.14  E-value=0.01  Score=50.23  Aligned_cols=102  Identities=13%  Similarity=0.148  Sum_probs=66.4

Q ss_pred             hhHhhhcCCCCCCCEEEEEcCChHHHHHHHHHHHcCCeEEEEeCCchhHHHHHH---HcCCCE--EecCCCHHHHHHhcC
Q 018067          172 YSPLRFYGLDKPGMHVGVVGLGGLGHVAVKFAKAMGVKVTVISTSPSKKSEAIE---RLGADS--FLVSRDQDEMQAAMG  246 (361)
Q Consensus       172 ~~~l~~~~~~~~g~~vlV~Gag~vG~~a~~la~~~g~~vi~~~~~~~~~~~~~~---~~g~~~--vv~~~~~~~~~~~~~  246 (361)
                      +..+-....+++|++||=+|+|- |-.+..+++..|++|+.++.+++....+.+   +.|...  .+...+.   ....+
T Consensus        41 ~~~~~~~l~l~~g~~VLDiGCG~-G~~a~~~a~~~g~~v~gi~ls~~q~~~a~~~~~~~~l~~~~~~~~~d~---~~~~~  116 (280)
T d2fk8a1          41 VDLNLDKLDLKPGMTLLDIGCGW-GTTMRRAVERFDVNVIGLTLSKNQHARCEQVLASIDTNRSRQVLLQGW---EDFAE  116 (280)
T ss_dssp             HHHHHTTSCCCTTCEEEEESCTT-SHHHHHHHHHHCCEEEEEESCHHHHHHHHHHHHTSCCSSCEEEEESCG---GGCCC
T ss_pred             HHHHHHHcCCCCCCEEEEecCCc-hHHHHHHHHhCceeEEEecchHHHHHHHHHHHHhhccccchhhhhhhh---hhhcc
Confidence            43444555689999999999864 345677888889999999999877654433   334321  1111121   23345


Q ss_pred             CccEEEEc-----CCCc---ccHHHHHhccccCCEEEEe
Q 018067          247 TMDGIIDT-----VSAV---HPLMPLIGLLKSQGKLVLV  277 (361)
Q Consensus       247 g~d~vid~-----~g~~---~~~~~~~~~l~~~G~~v~~  277 (361)
                      .+|.|+-.     ++..   ..+..+.+.|+|+|+++.-
T Consensus       117 ~fD~i~si~~~eh~~~~~~~~~f~~i~~~LkpgG~~~i~  155 (280)
T d2fk8a1         117 PVDRIVSIEAFEHFGHENYDDFFKRCFNIMPADGRMTVQ  155 (280)
T ss_dssp             CCSEEEEESCGGGTCGGGHHHHHHHHHHHSCTTCEEEEE
T ss_pred             chhhhhHhhHHHHhhhhhHHHHHHHHHhccCCCceEEEE
Confidence            78888542     3322   3466788999999999863

>d2czca2 c.2.1.3 (A:1-139,A:302-334) Glyceraldehyde-3-phosphate dehydrogenase (GAPDH) {Archaeon Pyrococcus horikoshii [TaxId: 53953]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Glyceraldehyde-3-phosphate dehydrogenase-like, N-terminal domain
domain: Glyceraldehyde-3-phosphate dehydrogenase (GAPDH)
species: Archaeon Pyrococcus horikoshii [TaxId: 53953]

Probab=96.13  E-value=0.03  Score=43.52  Aligned_cols=97  Identities=16%  Similarity=0.192  Sum_probs=65.7

Q ss_pred             EEEEEcCChHHHHHHHHHHHcC-CeEEEEeCCc-hhHHHHHHHcCCCEEecCCC-HH-----------HHHHhcCCccEE
Q 018067          186 HVGVVGLGGLGHVAVKFAKAMG-VKVTVISTSP-SKKSEAIERLGADSFLVSRD-QD-----------EMQAAMGTMDGI  251 (361)
Q Consensus       186 ~vlV~Gag~vG~~a~~la~~~g-~~vi~~~~~~-~~~~~~~~~~g~~~vv~~~~-~~-----------~~~~~~~g~d~v  251 (361)
                      +|.|.|-|-||...+..+.... .+++.+.+.. ........+++.+......+ ..           .+.++..++|+|
T Consensus         4 rIaINGfGRIGR~v~Ral~~~~dieiVaINd~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~vDvV   83 (172)
T d2czca2           4 KVGVNGYGTIGKRVAYAVTKQDDMELIGITKTKPDFEAYRAKELGIPVYAASEEFIPRFEKEGFEVAGTLNDLLEKVDII   83 (172)
T ss_dssp             EEEEECCSHHHHHHHHHHHTCTTEEEEEEEESSCSHHHHHHHHTTCCEEESSGGGHHHHHHHTCCCSCBHHHHHTTCSEE
T ss_pred             EEEEECCCHHHHHHHHHHHhCCCceEEEEecCCChHHHHHhhhcCceeecccccceeeecccCccccchhhhhhccCCEE
Confidence            6899999999998888887654 5777666432 22233335566553322211 11           122223479999


Q ss_pred             EEcCCCcccHHHHHhccccCCEEEEecCCCC
Q 018067          252 IDTVSAVHPLMPLIGLLKSQGKLVLVGAPEK  282 (361)
Q Consensus       252 id~~g~~~~~~~~~~~l~~~G~~v~~g~~~~  282 (361)
                      +||+|.-.+.+.+...+..|-+.|..+.+..
T Consensus        84 iEcTG~f~~~~~~~~hl~~G~k~Vi~s~~~~  114 (172)
T d2czca2          84 VDATPGGIGAKNKPLYEKAGVKAIFQGGEKA  114 (172)
T ss_dssp             EECCSTTHHHHHHHHHHHHTCEEEECTTSCG
T ss_pred             EECCCCCCCHHHHHHHHHcCCCEEEECCCCc
Confidence            9999998777888889999999999987653

>d3cuma2 c.2.1.6 (A:1-162) Hydroxyisobutyrate dehydrogenase {Pseudomonas aeruginosa [TaxId: 287]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: 6-phosphogluconate dehydrogenase-like, N-terminal domain
domain: Hydroxyisobutyrate dehydrogenase
species: Pseudomonas aeruginosa [TaxId: 287]

Probab=96.12  E-value=0.053  Score=41.48  Aligned_cols=90  Identities=17%  Similarity=0.198  Sum_probs=61.2

Q ss_pred             CEEEEEcCChHHHHHHHHHHHcCCeEEEEeCCchhHHHHHHHcCCCEEecCCCHHHHHHhcCCccEEEEcCCCcccHHHH
Q 018067          185 MHVGVVGLGGLGHVAVKFAKAMGVKVTVISTSPSKKSEAIERLGADSFLVSRDQDEMQAAMGTMDGIIDTVSAVHPLMPL  264 (361)
Q Consensus       185 ~~vlV~Gag~vG~~a~~la~~~g~~vi~~~~~~~~~~~~~~~~g~~~vv~~~~~~~~~~~~~g~d~vid~~g~~~~~~~~  264 (361)
                      .+|.++|.|.+|...+.-+...|.+|++.+++.++...+ ...++...   .+   ..+.....|+++-|+.........
T Consensus         2 ~kIg~IGlG~MG~~iA~~L~~~g~~v~~~d~~~~~~~~~-~~~~~~~~---~~---~~e~~~~~diii~~v~~~~~~~~v   74 (162)
T d3cuma2           2 KQIAFIGLGHMGAPMATNLLKAGYLLNVFDLVQSAVDGL-VAAGASAA---RS---ARDAVQGADVVISMLPASQHVEGL   74 (162)
T ss_dssp             CEEEEECCSTTHHHHHHHHHHTTCEEEEECSSHHHHHHH-HHTTCEEC---SS---HHHHHTSCSEEEECCSCHHHHHHH
T ss_pred             CEEEEEEEHHHHHHHHHHHHHCCCeEEEEECchhhhhhh-hhhhcccc---ch---hhhhccccCeeeecccchhhHHHH
Confidence            368899999999988888888899999999998887766 45564321   11   223444678888888765433332


Q ss_pred             -------HhccccCCEEEEecCCC
Q 018067          265 -------IGLLKSQGKLVLVGAPE  281 (361)
Q Consensus       265 -------~~~l~~~G~~v~~g~~~  281 (361)
                             ...+.++-.++.++...
T Consensus        75 ~~~~~~~~~~l~~g~iiid~st~~   98 (162)
T d3cuma2          75 YLDDDGLLAHIAPGTLVLECSTIA   98 (162)
T ss_dssp             HHSTTCHHHHSCTTCEEEECSCCC
T ss_pred             HhccccccccCCCCCEEEECCCCC
Confidence                   33455666666666543

>d1jtva_ c.2.1.2 (A:) Human estrogenic 17beta-hydroxysteroid dehydrogenase {Human (Homo sapiens) [TaxId: 9606]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Tyrosine-dependent oxidoreductases
domain: Human estrogenic 17beta-hydroxysteroid dehydrogenase
species: Human (Homo sapiens) [TaxId: 9606]

Probab=96.11  E-value=0.011  Score=50.33  Aligned_cols=94  Identities=18%  Similarity=0.201  Sum_probs=58.2

Q ss_pred             EEEEcC-ChHHHHHHHHHHHcCCeEEEEe---CCch---hHHHHHHHcC---CC---EEecCCCHHHHHHh----c-CCc
Q 018067          187 VGVVGL-GGLGHVAVKFAKAMGVKVTVIS---TSPS---KKSEAIERLG---AD---SFLVSRDQDEMQAA----M-GTM  248 (361)
Q Consensus       187 vlV~Ga-g~vG~~a~~la~~~g~~vi~~~---~~~~---~~~~~~~~~g---~~---~vv~~~~~~~~~~~----~-~g~  248 (361)
                      |||.|+ +++|.+++..+...|++|+.+.   ++.+   +..+.++++.   ..   ...|..+.+.+..+    . +..
T Consensus         5 vlITGassGIG~a~A~~la~~Ga~v~~v~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~Dv~~~~~~~~~~~~~~~g~i   84 (285)
T d1jtva_           5 VLITGCSSGIGLHLAVRLASDPSQSFKVYATLRDLKTQGRLWEAARALACPPGSLETLQLDVRDSKSVAAARERVTEGRV   84 (285)
T ss_dssp             EEESCCSSHHHHHHHHHHHTCTTCCEEEEEEESCGGGTHHHHHHHHHTTCCTTSEEEEECCTTCHHHHHHHHHTCTTSCC
T ss_pred             EEEccCCCHHHHHHHHHHHHCCCCeEEEEEecCChhhhHHHHHHHHHHhccCCceEEEeccccchHhhhhhhhhccccch
Confidence            466687 9999999999999998765443   3322   3334444443   22   22355665544433    2 469


Q ss_pred             cEEEEcCCCcc-------------------------cHHHHHhcc--ccCCEEEEecCC
Q 018067          249 DGIIDTVSAVH-------------------------PLMPLIGLL--KSQGKLVLVGAP  280 (361)
Q Consensus       249 d~vid~~g~~~-------------------------~~~~~~~~l--~~~G~~v~~g~~  280 (361)
                      |++++++|...                         +.+.++..|  +.+|++|.+++.
T Consensus        85 dilvnnag~~~~~~~~~~~~e~~~~~~~vN~~g~~~~~~~~lp~m~~~~~G~Iv~isS~  143 (285)
T d1jtva_          85 DVLVCNAGLGLLGPLEALGEDAVASVLDVNVVGTVRMLQAFLPDMKRRGSGRVLVTGSV  143 (285)
T ss_dssp             SEEEECCCCCCCSCGGGSCHHHHHHHHHHHTHHHHHHHHHHHHHHHHHTCEEEEEEEEG
T ss_pred             hhhhhcccccccccccchhHhhhhhhhhcchhHHHHHHHHHHHHHHHcCCCceEEEech
Confidence            99999988531                         233344455  346999999764

>d1c1da1 c.2.1.7 (A:149-349) Phenylalanine dehydrogenase {Rhodococcus sp., M4 [TaxId: 1831]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Aminoacid dehydrogenase-like, C-terminal domain
domain: Phenylalanine dehydrogenase
species: Rhodococcus sp., M4 [TaxId: 1831]

Probab=96.10  E-value=0.013  Score=47.00  Aligned_cols=80  Identities=21%  Similarity=0.220  Sum_probs=56.0

Q ss_pred             CCCCEEEEEcCChHHHHHHHHHHHcCCeEEEEeCCchhHHHHHHHcCCCEEecCCCHHHHHHhcCCccEEEEcCCCcccH
Q 018067          182 KPGMHVGVVGLGGLGHVAVKFAKAMGVKVTVISTSPSKKSEAIERLGADSFLVSRDQDEMQAAMGTMDGIIDTVSAVHPL  261 (361)
Q Consensus       182 ~~g~~vlV~Gag~vG~~a~~la~~~g~~vi~~~~~~~~~~~~~~~~g~~~vv~~~~~~~~~~~~~g~d~vid~~g~~~~~  261 (361)
                      -.|.+|+|.|.|.+|..+++++...|++|++.+.+.++.... ..+|.+.+ ...+     .+...+|+.+=|+.+...-
T Consensus        25 L~gk~v~IqG~G~VG~~~A~~L~~~Gakvvv~d~d~~~~~~~-~~~g~~~~-~~~~-----~~~~~~DI~iPcA~~~~I~   97 (201)
T d1c1da1          25 LDGLTVLVQGLGAVGGSLASLAAEAGAQLLVADTDTERVAHA-VALGHTAV-ALED-----VLSTPCDVFAPCAMGGVIT   97 (201)
T ss_dssp             STTCEEEEECCSHHHHHHHHHHHHTTCEEEEECSCHHHHHHH-HHTTCEEC-CGGG-----GGGCCCSEEEECSCSCCBC
T ss_pred             CCCCEEEEECCCHHHHHHHHHHHHCCCEEEEecchHHHHHHH-Hhhccccc-Cccc-----cccccceeeeccccccccc
Confidence            378999999999999999999999999999888887776655 56776532 2111     2334778887766554323


Q ss_pred             HHHHhcc
Q 018067          262 MPLIGLL  268 (361)
Q Consensus       262 ~~~~~~l  268 (361)
                      ....+.+
T Consensus        98 ~~~a~~i  104 (201)
T d1c1da1          98 TEVARTL  104 (201)
T ss_dssp             HHHHHHC
T ss_pred             HHHHhhh
Confidence            3333434

>d2o57a1 c.66.1.18 (A:16-297) Putative sarcosine dimethylglycine methyltransferase {Red algae (Galdieria sulphuraria) [TaxId: 130081]}

class: Alpha and beta proteins (a/b)
fold: S-adenosyl-L-methionine-dependent methyltransferases
superfamily: S-adenosyl-L-methionine-dependent methyltransferases
family: Mycolic acid cyclopropane synthase
domain: Putative sarcosine dimethylglycine methyltransferase
species: Red algae (Galdieria sulphuraria) [TaxId: 130081]

Probab=96.07  E-value=0.0076  Score=51.04  Aligned_cols=103  Identities=16%  Similarity=0.178  Sum_probs=66.1

Q ss_pred             hhhcCCCCCCCEEEEEcCChHHHHHHHHHHHcCCeEEEEeCCchhHHHHH---HHcCCC--EEecCCCHHHHHHhcCCcc
Q 018067          175 LRFYGLDKPGMHVGVVGLGGLGHVAVKFAKAMGVKVTVISTSPSKKSEAI---ERLGAD--SFLVSRDQDEMQAAMGTMD  249 (361)
Q Consensus       175 l~~~~~~~~g~~vlV~Gag~vG~~a~~la~~~g~~vi~~~~~~~~~~~~~---~~~g~~--~vv~~~~~~~~~~~~~g~d  249 (361)
                      +.....+++|++||=+|+|. |..+..+++..|++|+.++-++.....+.   +..|..  .-+...+...+..-.+.+|
T Consensus        59 l~~~~~l~~~~~vLDiGcG~-G~~~~~la~~~~~~v~gvD~s~~~i~~a~~~~~~~gl~~~v~~~~~d~~~l~~~~~sfD  137 (282)
T d2o57a1          59 LAMTGVLQRQAKGLDLGAGY-GGAARFLVRKFGVSIDCLNIAPVQNKRNEEYNNQAGLADNITVKYGSFLEIPCEDNSYD  137 (282)
T ss_dssp             HHHTTCCCTTCEEEEETCTT-SHHHHHHHHHHCCEEEEEESCHHHHHHHHHHHHHHTCTTTEEEEECCTTSCSSCTTCEE
T ss_pred             HHHhcCCCCCCEEEEeCCCC-cHHHhhhhccCCcEEEEEeccchhhhhhhcccccccccccccccccccccccccccccc
Confidence            44556689999999999874 67778888888999999998876543332   233432  1122222111111124699


Q ss_pred             EEEEcCCC------cccHHHHHhccccCCEEEEec
Q 018067          250 GIIDTVSA------VHPLMPLIGLLKSQGKLVLVG  278 (361)
Q Consensus       250 ~vid~~g~------~~~~~~~~~~l~~~G~~v~~g  278 (361)
                      +|+-.-.-      ...+..+.+.|+|+|+++...
T Consensus       138 ~V~~~~~l~h~~d~~~~l~~~~~~LkpgG~l~~~~  172 (282)
T d2o57a1         138 FIWSQDAFLHSPDKLKVFQECARVLKPRGVMAITD  172 (282)
T ss_dssp             EEEEESCGGGCSCHHHHHHHHHHHEEEEEEEEEEE
T ss_pred             hhhccchhhhccCHHHHHHHHHHhcCCCcEEEEEE
Confidence            99754321      234678889999999988764

>d2h7ma1 c.2.1.2 (A:2-269) Enoyl-ACP reductase {Mycobacterium tuberculosis, TB, gene InhA [TaxId: 1773]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Tyrosine-dependent oxidoreductases
domain: Enoyl-ACP reductase
species: Mycobacterium tuberculosis, TB, gene InhA [TaxId: 1773]

Probab=96.04  E-value=0.011  Score=49.36  Aligned_cols=76  Identities=16%  Similarity=0.315  Sum_probs=52.9

Q ss_pred             CCCCEEEEEcC-C--hHHHHHHHHHHHcCCeEEEEeCCchhH-HHHHHHcCCC---EEecCCCHHH-------HHHhc--
Q 018067          182 KPGMHVGVVGL-G--GLGHVAVKFAKAMGVKVTVISTSPSKK-SEAIERLGAD---SFLVSRDQDE-------MQAAM--  245 (361)
Q Consensus       182 ~~g~~vlV~Ga-g--~vG~~a~~la~~~g~~vi~~~~~~~~~-~~~~~~~g~~---~vv~~~~~~~-------~~~~~--  245 (361)
                      -.|+++||.|+ |  ++|.++++.+...|++|+++.+++++. +.+.++++..   ...|..+++.       +.+..  
T Consensus         4 l~gK~~lItGaag~~GIG~aiA~~la~~Ga~Vil~~~~~~~~~~~~~~~~~~~~~~~~~dv~~~~~~~~~~~~v~~~~~~   83 (268)
T d2h7ma1           4 LDGKRILVSGIITDSSIAFHIARVAQEQGAQLVLTGFDRLRLIQRITDRLPAKAPLLELDVQNEEHLASLAGRVTEAIGA   83 (268)
T ss_dssp             TTTCEEEECCCSSTTCHHHHHHHHHHHTTCEEEEEECSCHHHHHHHHTTSSSCCCEEECCTTCHHHHHHHHHHHHHHHCT
T ss_pred             CCCCEEEEECCCCCCHHHHHHHHHHHHcCCEEEEEeCChHHHHHHHHHHcCCceeeEeeecccccccccccchhhhcccc
Confidence            46899999985 4  599999999999999999999888775 4455556643   2234444322       12111  


Q ss_pred             -CCccEEEEcCCC
Q 018067          246 -GTMDGIIDTVSA  257 (361)
Q Consensus       246 -~g~d~vid~~g~  257 (361)
                       +..|++++++|.
T Consensus        84 ~~~ld~~i~~ag~   96 (268)
T d2h7ma1          84 GNKLDGVVHSIGF   96 (268)
T ss_dssp             TCCEEEEEECCCC
T ss_pred             CCCcceeeecccc
Confidence             358999999883

>d1j4aa1 c.2.1.4 (A:104-300) D-lactate dehydrogenase {Lactobacillus helveticus [TaxId: 1587]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Formate/glycerate dehydrogenases, NAD-domain
domain: D-lactate dehydrogenase
species: Lactobacillus helveticus [TaxId: 1587]

Probab=96.02  E-value=0.0097  Score=47.55  Aligned_cols=87  Identities=24%  Similarity=0.230  Sum_probs=59.8

Q ss_pred             CCCEEEEEcCChHHHHHHHHHHHcCCeEEEEeCCchhHHHHHHHcCCCEEecCCCHHHHHHhcCCccEEEEcCCCcc---
Q 018067          183 PGMHVGVVGLGGLGHVAVKFAKAMGVKVTVISTSPSKKSEAIERLGADSFLVSRDQDEMQAAMGTMDGIIDTVSAVH---  259 (361)
Q Consensus       183 ~g~~vlV~Gag~vG~~a~~la~~~g~~vi~~~~~~~~~~~~~~~~g~~~vv~~~~~~~~~~~~~g~d~vid~~g~~~---  259 (361)
                      .|++|.|+|.|.||..++++++.+|++|++.+........   ..+..    ..+   +.++-...|+++-++....   
T Consensus        42 ~gk~vgIiG~G~IG~~va~~l~~fg~~V~~~d~~~~~~~~---~~~~~----~~~---l~~~l~~sDii~~~~plt~~T~  111 (197)
T d1j4aa1          42 RDQVVGVVGTGHIGQVFMQIMEGFGAKVITYDIFRNPELE---KKGYY----VDS---LDDLYKQADVISLHVPDVPANV  111 (197)
T ss_dssp             GGSEEEEECCSHHHHHHHHHHHHTTCEEEEECSSCCHHHH---HTTCB----CSC---HHHHHHHCSEEEECSCCCGGGT
T ss_pred             cCCeEEEecccccchhHHHhHhhhcccccccCcccccccc---cceee----ecc---ccccccccccccccCCcccccc
Confidence            5899999999999999999999999999998876543221   12221    111   2333335898887765321   


Q ss_pred             --cHHHHHhccccCCEEEEecC
Q 018067          260 --PLMPLIGLLKSQGKLVLVGA  279 (361)
Q Consensus       260 --~~~~~~~~l~~~G~~v~~g~  279 (361)
                        .-...++.|+++..+|.++.
T Consensus       112 ~li~~~~l~~mk~~a~lIN~sR  133 (197)
T d1j4aa1         112 HMINDESIAKMKQDVVIVNVSR  133 (197)
T ss_dssp             TCBSHHHHHHSCTTEEEEECSC
T ss_pred             ccccHHHHhhhCCccEEEecCc
Confidence              12456788888888888864

>d1mx3a1 c.2.1.4 (A:126-318) Transcription corepressor CtbP {Human (Homo sapiens), Ctbp1 [TaxId: 9606]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Formate/glycerate dehydrogenases, NAD-domain
domain: Transcription corepressor CtbP
species: Human (Homo sapiens), Ctbp1 [TaxId: 9606]

Probab=96.00  E-value=0.0099  Score=47.36  Aligned_cols=90  Identities=21%  Similarity=0.210  Sum_probs=60.7

Q ss_pred             CCCCEEEEEcCChHHHHHHHHHHHcCCeEEEEeCCchhHHHHHHHcCCCEEecCCCHHHHHHhcCCccEEEEcCCCc-c-
Q 018067          182 KPGMHVGVVGLGGLGHVAVKFAKAMGVKVTVISTSPSKKSEAIERLGADSFLVSRDQDEMQAAMGTMDGIIDTVSAV-H-  259 (361)
Q Consensus       182 ~~g~~vlV~Gag~vG~~a~~la~~~g~~vi~~~~~~~~~~~~~~~~g~~~vv~~~~~~~~~~~~~g~d~vid~~g~~-~-  259 (361)
                      -.|++|.|+|.|.||...+++++.+|++|+..++......  ....+....   .+   +.++....|+|.-++... . 
T Consensus        47 L~gktvgIiG~G~IG~~va~~l~~fg~~v~~~d~~~~~~~--~~~~~~~~~---~~---l~~ll~~sD~i~~~~plt~~T  118 (193)
T d1mx3a1          47 IRGETLGIIGLGRVGQAVALRAKAFGFNVLFYDPYLSDGV--ERALGLQRV---ST---LQDLLFHSDCVTLHCGLNEHN  118 (193)
T ss_dssp             CTTCEEEEECCSHHHHHHHHHHHTTTCEEEEECTTSCTTH--HHHHTCEEC---SS---HHHHHHHCSEEEECCCCCTTC
T ss_pred             eeCceEEEeccccccccceeeeeccccceeeccCcccccc--hhhhccccc---cc---hhhccccCCEEEEeecccccc
Confidence            4689999999999999999999999999999887654322  123343321   11   223333478887655431 1 


Q ss_pred             ---cHHHHHhccccCCEEEEecC
Q 018067          260 ---PLMPLIGLLKSQGKLVLVGA  279 (361)
Q Consensus       260 ---~~~~~~~~l~~~G~~v~~g~  279 (361)
                         .-...++.++++..+|.++.
T Consensus       119 ~~li~~~~l~~mk~~a~lIN~sR  141 (193)
T d1mx3a1         119 HHLINDFTVKQMRQGAFLVNTAR  141 (193)
T ss_dssp             TTSBSHHHHTTSCTTEEEEECSC
T ss_pred             hhhhhHHHHhccCCCCeEEecCC
Confidence               12356778888888888875

>d1dssg1 c.2.1.3 (G:1-148,G:313-334) Glyceraldehyde-3-phosphate dehydrogenase (GAPDH) {South China Sea lobster (Palinurus versicolor) [TaxId: 150436]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Glyceraldehyde-3-phosphate dehydrogenase-like, N-terminal domain
domain: Glyceraldehyde-3-phosphate dehydrogenase (GAPDH)
species: South China Sea lobster (Palinurus versicolor) [TaxId: 150436]

Probab=95.97  E-value=0.049  Score=41.97  Aligned_cols=97  Identities=15%  Similarity=0.310  Sum_probs=65.2

Q ss_pred             EEEEEcCChHHHHHHHHHHHcCCeEEEEeCCc---hhHHHHHHH---cC---CC---------------EEecCCCHHHH
Q 018067          186 HVGVVGLGGLGHVAVKFAKAMGVKVTVISTSP---SKKSEAIER---LG---AD---------------SFLVSRDQDEM  241 (361)
Q Consensus       186 ~vlV~Gag~vG~~a~~la~~~g~~vi~~~~~~---~~~~~~~~~---~g---~~---------------~vv~~~~~~~~  241 (361)
                      +|.|.|-|-+|.++...+...+.+++.+.+..   +....+.+.   .|   .+               .+...++++.+
T Consensus         2 kIgINGfGRIGR~~~R~~~~~~~~ivaINd~~~~~~~~~yLlkyDS~hG~~~~~i~~~~~~l~ing~~I~~~~~~~p~~i   81 (169)
T d1dssg1           2 KIGINGFGRIGRLVLRAALEMGAQVVAVNDPFIALEYMVYMFKYDSTHGMFKGEVKAEDGALVVDGKKITVFNEMKPENI   81 (169)
T ss_dssp             CEEEECCSHHHHHHHHHHHHHTCCEEEEECTTSCHHHHHHHHHCCTTTCCCSSCEEEETTEEEETTEEEEEECCSSGGGC
T ss_pred             eEEEECCcHHHHHHHHHHHhCCCcEEEECCCCcCHHHHHHHHhcccccCCcCCeEEEeCCEEEECCEEEEEEecCChHHC
Confidence            58899999999999999888888888887643   233334320   01   00               11112223333


Q ss_pred             HHhcCCccEEEEcCCCcccHHHHHhccccCCEEEEecCCCC
Q 018067          242 QAAMGTMDGIIDTVSAVHPLMPLIGLLKSQGKLVLVGAPEK  282 (361)
Q Consensus       242 ~~~~~g~d~vid~~g~~~~~~~~~~~l~~~G~~v~~g~~~~  282 (361)
                      .+..-++|+|+||+|.-...+.+...+..+-+-|.+..+..
T Consensus        82 ~W~~~gvD~ViEcTG~f~~~~~~~~hl~~gakkViisaP~~  122 (169)
T d1dssg1          82 PWSKAGAEYIVESTGVFTTIEKASAHFKGGAKKVIISAPSA  122 (169)
T ss_dssp             CHHHHTCCEEEECSSSCCSHHHHGGGGTTTCSEEEESSCCS
T ss_pred             CccccCCCEEEecCceEcCHHHHHHHHhcCCceEeecCCcc
Confidence            33334899999999998878899999988877777766543

>d1kjqa2 c.30.1.1 (A:2-112) Glycinamide ribonucleotide transformylase PurT, N-domain {Escherichia coli [TaxId: 562]}

class: Alpha and beta proteins (a/b)
fold: PreATP-grasp domain
superfamily: PreATP-grasp domain
family: BC N-terminal domain-like
domain: Glycinamide ribonucleotide transformylase PurT, N-domain
species: Escherichia coli [TaxId: 562]

Probab=95.93  E-value=0.0072  Score=43.50  Aligned_cols=65  Identities=18%  Similarity=0.251  Sum_probs=48.0

Q ss_pred             CCEEEEEcCChHHHHHHHHHHHcCCeEEEEeCCchhHHHHHHHcCCCE-EecCCCHHHHHHhc--CCccEE
Q 018067          184 GMHVGVVGLGGLGHVAVKFAKAMGVKVTVISTSPSKKSEAIERLGADS-FLVSRDQDEMQAAM--GTMDGI  251 (361)
Q Consensus       184 g~~vlV~Gag~vG~~a~~la~~~g~~vi~~~~~~~~~~~~~~~~g~~~-vv~~~~~~~~~~~~--~g~d~v  251 (361)
                      +.+|.|+|+|.+|.+.++-|+.+|.++++.+.+++.-.   ....... +.++++.+.+.++.  ..+|++
T Consensus        11 ~~kigIlGgGQL~rMla~aA~~lG~~v~v~d~~~~~PA---~~va~~~i~~~~~d~~~l~~~~~~~~~Dvi   78 (111)
T d1kjqa2          11 ATRVMLLGSGELGKEVAIECQRLGVEVIAVDRYADAPA---MHVAHRSHVINMLDGDALRRVVELEKPHYI   78 (111)
T ss_dssp             CCEEEEESCSHHHHHHHHHHHTTTCEEEEEESSTTCGG---GGGSSEEEECCTTCHHHHHHHHHHHCCSEE
T ss_pred             CCEEEEEeCCHHHHHHHHHHHHCCCEEEEEcCCCCCch---hhcCCeEEECCCCCHHHHHHHHHhhCCceE
Confidence            35699999999999999999999999999997765321   2233333 34567777776655  368888

>d1qp8a1 c.2.1.4 (A:83-263) Putative formate dehydrogenase {Archaeon Pyrobaculum aerophilum [TaxId: 13773]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Formate/glycerate dehydrogenases, NAD-domain
domain: Putative formate dehydrogenase
species: Archaeon Pyrobaculum aerophilum [TaxId: 13773]

Probab=95.91  E-value=0.014  Score=45.86  Aligned_cols=84  Identities=25%  Similarity=0.402  Sum_probs=61.6

Q ss_pred             CCCEEEEEcCChHHHHHHHHHHHcCCeEEEEeCCchhHHHHHHHcCCCEEecCCCHHHHHHhcCCccEEEEcCCCc-c--
Q 018067          183 PGMHVGVVGLGGLGHVAVKFAKAMGVKVTVISTSPSKKSEAIERLGADSFLVSRDQDEMQAAMGTMDGIIDTVSAV-H--  259 (361)
Q Consensus       183 ~g~~vlV~Gag~vG~~a~~la~~~g~~vi~~~~~~~~~~~~~~~~g~~~vv~~~~~~~~~~~~~g~d~vid~~g~~-~--  259 (361)
                      .|++|.|+|.|.+|...+++++.+|++|++.++...+        +.....     +.+.++....|+|+-++.-. .  
T Consensus        41 ~gk~vgIiG~G~IG~~va~~l~~~g~~v~~~d~~~~~--------~~~~~~-----~~l~ell~~sDiv~~~~pl~~~t~  107 (181)
T d1qp8a1          41 QGEKVAVLGLGEIGTRVGKILAALGAQVRGFSRTPKE--------GPWRFT-----NSLEEALREARAAVCALPLNKHTR  107 (181)
T ss_dssp             TTCEEEEESCSTHHHHHHHHHHHTTCEEEEECSSCCC--------SSSCCB-----SCSHHHHTTCSEEEECCCCSTTTT
T ss_pred             cCceEEEeccccccccceeeeeccccccccccccccc--------cceeee-----echhhhhhccchhhcccccccccc
Confidence            5899999999999999999999999999999876432        111111     12345566789998876432 1  


Q ss_pred             --cHHHHHhccccCCEEEEecC
Q 018067          260 --PLMPLIGLLKSQGKLVLVGA  279 (361)
Q Consensus       260 --~~~~~~~~l~~~G~~v~~g~  279 (361)
                        .-...++.++++..+|.+|.
T Consensus       108 ~li~~~~l~~mk~~ailIN~~R  129 (181)
T d1qp8a1         108 GLVKYQHLALMAEDAVFVNVGR  129 (181)
T ss_dssp             TCBCHHHHTTSCTTCEEEECSC
T ss_pred             cccccceeeeccccceEEeccc
Confidence              12468888999999999874

>d2fr1a1 c.2.1.2 (A:1657-1915) Erythromycin synthase, eryAI, 1st ketoreductase module {Saccharopolyspora erythraea [TaxId: 1836]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Tyrosine-dependent oxidoreductases
domain: Erythromycin synthase, eryAI, 1st ketoreductase module
species: Saccharopolyspora erythraea [TaxId: 1836]

Probab=95.89  E-value=0.02  Score=47.62  Aligned_cols=78  Identities=22%  Similarity=0.316  Sum_probs=52.9

Q ss_pred             CCCCCCEEEEEcC-ChHHHHHHHHHHHcCC-eEEEEeCCc---hhHHHHH---HHcCCCE---EecCCCHHHHHHhc---
Q 018067          180 LDKPGMHVGVVGL-GGLGHVAVKFAKAMGV-KVTVISTSP---SKKSEAI---ERLGADS---FLVSRDQDEMQAAM---  245 (361)
Q Consensus       180 ~~~~g~~vlV~Ga-g~vG~~a~~la~~~g~-~vi~~~~~~---~~~~~~~---~~~g~~~---vv~~~~~~~~~~~~---  245 (361)
                      .++|+.++||.|+ |+||++.+..+-..|+ +|+++.++.   +...++.   +..|...   ..|-.+.+.++++.   
T Consensus         5 ~~~p~gt~lVTGgs~GIG~a~a~~la~~Ga~~vvl~~R~~~~~~~~~~~~~~l~~~g~~v~~~~~Dv~d~~~~~~~~~~i   84 (259)
T d2fr1a1           5 EWKPTGTVLVTGGTGGVGGQIARWLARRGAPHLLLVSRSGPDADGAGELVAELEALGARTTVAACDVTDRESVRELLGGI   84 (259)
T ss_dssp             CCCCCSEEEEETTTSHHHHHHHHHHHHHTCSEEEEEESSGGGSTTHHHHHHHHHHTTCEEEEEECCTTCHHHHHHHHHTS
T ss_pred             ccCCcCEEEEECCCcHHHHHHHHHHHHCCCCEEEEEeCCccCHHHHHHHHHHHHhccccccccccccchHHHHHHhhccc
Confidence            3689999999997 9999999999988999 477676653   2222222   3456532   23555655544432   


Q ss_pred             ---CCccEEEEcCCC
Q 018067          246 ---GTMDGIIDTVSA  257 (361)
Q Consensus       246 ---~g~d~vid~~g~  257 (361)
                         .+.|.++++.|.
T Consensus        85 ~~~~~i~~vv~~ag~   99 (259)
T d2fr1a1          85 GDDVPLSAVFHAAAT   99 (259)
T ss_dssp             CTTSCEEEEEECCCC
T ss_pred             ccccccccccccccc
Confidence               268999999885

>d1xxla_ c.66.1.41 (A:) Hypothetical protein YcgJ {Bacillus subtilis [TaxId: 1423]}

class: Alpha and beta proteins (a/b)
fold: S-adenosyl-L-methionine-dependent methyltransferases
superfamily: S-adenosyl-L-methionine-dependent methyltransferases
family: UbiE/COQ5-like
domain: Hypothetical protein YcgJ
species: Bacillus subtilis [TaxId: 1423]

Probab=95.81  E-value=0.0044  Score=51.00  Aligned_cols=101  Identities=17%  Similarity=0.194  Sum_probs=63.9

Q ss_pred             hhhcCCCCCCCEEEEEcCChHHHHHHHHHHHcCCeEEEEeCCchhHHHHH---HHcCCC-EEecCCCHHHHHHhcCCccE
Q 018067          175 LRFYGLDKPGMHVGVVGLGGLGHVAVKFAKAMGVKVTVISTSPSKKSEAI---ERLGAD-SFLVSRDQDEMQAAMGTMDG  250 (361)
Q Consensus       175 l~~~~~~~~g~~vlV~Gag~vG~~a~~la~~~g~~vi~~~~~~~~~~~~~---~~~g~~-~vv~~~~~~~~~~~~~g~d~  250 (361)
                      +.....+++|++||=+|+|. |..+..+++. +.+|+.++-+++....+.   ++.+.+ ..+...+.+...-..+.+|+
T Consensus         8 l~~~~~~~~~~rILDiGcGt-G~~~~~la~~-~~~v~gvD~S~~~l~~A~~~~~~~~~~~~~~~~~d~~~~~~~~~~fD~   85 (234)
T d1xxla_           8 MIKTAECRAEHRVLDIGAGA-GHTALAFSPY-VQECIGVDATKEMVEVASSFAQEKGVENVRFQQGTAESLPFPDDSFDI   85 (234)
T ss_dssp             HHHHHTCCTTCEEEEESCTT-SHHHHHHGGG-SSEEEEEESCHHHHHHHHHHHHHHTCCSEEEEECBTTBCCSCTTCEEE
T ss_pred             HHHHhCCCCCCEEEEeCCcC-cHHHHHHHHh-CCeEEEEeCChhhhhhhhhhhcccccccccccccccccccccccccce
Confidence            44556689999999999865 7777777774 689999999876544432   233432 11111111111111246999


Q ss_pred             EEEcCCC------cccHHHHHhccccCCEEEEe
Q 018067          251 IIDTVSA------VHPLMPLIGLLKSQGKLVLV  277 (361)
Q Consensus       251 vid~~g~------~~~~~~~~~~l~~~G~~v~~  277 (361)
                      |+-+-.-      ...+..+.+.|+|+|.++..
T Consensus        86 v~~~~~l~~~~d~~~~l~~~~r~LkpgG~~~~~  118 (234)
T d1xxla_          86 ITCRYAAHHFSDVRKAVREVARVLKQDGRFLLV  118 (234)
T ss_dssp             EEEESCGGGCSCHHHHHHHHHHHEEEEEEEEEE
T ss_pred             eeeeceeecccCHHHHHHHHHHeeCCCcEEEEE
Confidence            8864332      23477888999999998875

>d2g5ca2 c.2.1.6 (A:30-200) Prephenate dehydrogenase TyrA {Aquifex aeolicus [TaxId: 63363]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: 6-phosphogluconate dehydrogenase-like, N-terminal domain
domain: Prephenate dehydrogenase TyrA
species: Aquifex aeolicus [TaxId: 63363]

Probab=95.78  E-value=0.043  Score=42.28  Aligned_cols=91  Identities=21%  Similarity=0.159  Sum_probs=60.2

Q ss_pred             EEEEEcCChHHHHHHHHHHHcCC--eEEEEeCCchhHHHHHHHcCC-CEEecCCCHHHHHHhcCCccEEEEcCCCcc---
Q 018067          186 HVGVVGLGGLGHVAVKFAKAMGV--KVTVISTSPSKKSEAIERLGA-DSFLVSRDQDEMQAAMGTMDGIIDTVSAVH---  259 (361)
Q Consensus       186 ~vlV~Gag~vG~~a~~la~~~g~--~vi~~~~~~~~~~~~~~~~g~-~~vv~~~~~~~~~~~~~g~d~vid~~g~~~---  259 (361)
                      +|+|+|+|.+|...+..++..|.  +|++++++.+..+.+ ++.+. +......+.    ......|+|+-|+.-..   
T Consensus         3 ~I~IIG~G~mG~sla~~L~~~g~~~~I~~~D~~~~~~~~a-~~~~~~~~~~~~~~~----~~~~~~dlIila~p~~~~~~   77 (171)
T d2g5ca2           3 NVLIVGVGFMGGSFAKSLRRSGFKGKIYGYDINPESISKA-VDLGIIDEGTTSIAK----VEDFSPDFVMLSSPVRTFRE   77 (171)
T ss_dssp             EEEEESCSHHHHHHHHHHHHTTCCSEEEEECSCHHHHHHH-HHTTSCSEEESCGGG----GGGTCCSEEEECSCHHHHHH
T ss_pred             EEEEEccCHHHHHHHHHHHhcCCCeEEEEEECChHHHHHH-HHhhcchhhhhhhhh----hhccccccccccCCchhhhh
Confidence            68999999999999999988875  889999888776665 56664 433322111    11235788887776433   


Q ss_pred             cHHHHHhccccCCEEEEecCCC
Q 018067          260 PLMPLIGLLKSQGKLVLVGAPE  281 (361)
Q Consensus       260 ~~~~~~~~l~~~G~~v~~g~~~  281 (361)
                      .+......+.++..++.++...
T Consensus        78 vl~~l~~~~~~~~ii~d~~s~k   99 (171)
T d2g5ca2          78 IAKKLSYILSEDATVTDQGSVK   99 (171)
T ss_dssp             HHHHHHHHSCTTCEEEECCSCC
T ss_pred             hhhhhhcccccccccccccccc
Confidence            2333445566666777776543

>d1b7go1 c.2.1.3 (O:1-138,O:301-340) Glyceraldehyde-3-phosphate dehydrogenase (GAPDH) {Archaeon Sulfolobus solfataricus [TaxId: 2287]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Glyceraldehyde-3-phosphate dehydrogenase-like, N-terminal domain
domain: Glyceraldehyde-3-phosphate dehydrogenase (GAPDH)
species: Archaeon Sulfolobus solfataricus [TaxId: 2287]

Probab=95.76  E-value=0.04  Score=43.00  Aligned_cols=96  Identities=16%  Similarity=0.175  Sum_probs=62.1

Q ss_pred             EEEEEcCChHHHHHHHHHHHcC-CeEEEEeCCch-hHHHHHHHcCCCEEecCCCHHH-----------HHHhcCCccEEE
Q 018067          186 HVGVVGLGGLGHVAVKFAKAMG-VKVTVISTSPS-KKSEAIERLGADSFLVSRDQDE-----------MQAAMGTMDGII  252 (361)
Q Consensus       186 ~vlV~Gag~vG~~a~~la~~~g-~~vi~~~~~~~-~~~~~~~~~g~~~vv~~~~~~~-----------~~~~~~g~d~vi  252 (361)
                      +|.|.|.|-+|..+++.+.... .+++.+.+... .........+............           +.++..++|+|+
T Consensus         3 KVaINGfGRIGR~v~Ral~~~~dievVaInd~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~v~g~~~~~~~~vDiVi   82 (178)
T d1b7go1           3 NVAVNGYGTIGKRVADAIIKQPDMKLVGVAKTSPNYEAFIAHRRGIRIYVPQQSIKKFEESGIPVAGTVEDLIKTSDIVV   82 (178)
T ss_dssp             EEEEECCSHHHHHHHHHHHTCTTEEEEEEECSSCSHHHHHHHHTTCCEECCGGGHHHHHTTTCCCCCCHHHHHHHCSEEE
T ss_pred             EEEEECCCHHHHHHHHHHHhCCCCEEEEEECCCCcHHHHHhcccCcceeccCccceeccccceecCCchhhhhhcCCEEE
Confidence            5889999999999999998764 58888765432 2223323344332222211111           112223699999


Q ss_pred             EcCCCcccHHHHHhccccCCEEEEecCCC
Q 018067          253 DTVSAVHPLMPLIGLLKSQGKLVLVGAPE  281 (361)
Q Consensus       253 d~~g~~~~~~~~~~~l~~~G~~v~~g~~~  281 (361)
                      ||+|.-...+.+..+++.+-+++..+...
T Consensus        83 ecTG~f~~~e~a~~hl~~G~KvIi~~~~~  111 (178)
T d1b7go1          83 DTTPNGVGAQYKPIYLQLQRNAIFQGGEK  111 (178)
T ss_dssp             ECCSTTHHHHHHHHHHHTTCEEEECTTSC
T ss_pred             ECCCCcCCHHHHHHHHHcCCEEEEECCCC
Confidence            99999776777788887777888876543

>d1i9ga_ c.66.1.13 (A:) Probable methyltransferase Rv2118c {Mycobacterium tuberculosis [TaxId: 1773]}

class: Alpha and beta proteins (a/b)
fold: S-adenosyl-L-methionine-dependent methyltransferases
superfamily: S-adenosyl-L-methionine-dependent methyltransferases
family: tRNA(1-methyladenosine) methyltransferase-like
domain: Probable methyltransferase Rv2118c
species: Mycobacterium tuberculosis [TaxId: 1773]

Probab=95.75  E-value=0.015  Score=48.59  Aligned_cols=100  Identities=23%  Similarity=0.248  Sum_probs=65.7

Q ss_pred             hcCCCCCCCEEEEEcCChHHHHHHHHHHHcCC--eEEEEeCCchhHHHHHH---Hc-C--C-CEEecCCCHHHHHHh-cC
Q 018067          177 FYGLDKPGMHVGVVGLGGLGHVAVKFAKAMGV--KVTVISTSPSKKSEAIE---RL-G--A-DSFLVSRDQDEMQAA-MG  246 (361)
Q Consensus       177 ~~~~~~~g~~vlV~Gag~vG~~a~~la~~~g~--~vi~~~~~~~~~~~~~~---~~-g--~-~~vv~~~~~~~~~~~-~~  246 (361)
                      ....++||++||=.|+|. |.++..+|+..|-  +|+.++.+++..+.+.+   .+ +  . +..+...+.... .+ .+
T Consensus        90 ~~l~i~PG~~VLE~G~Gs-G~lt~~La~~vgp~G~V~~~d~~~~~~~~Ar~n~~~~~~~~~~nv~~~~~d~~~~-~~~~~  167 (264)
T d1i9ga_          90 HEGDIFPGARVLEAGAGS-GALTLSLLRAVGPAGQVISYEQRADHAEHARRNVSGCYGQPPDNWRLVVSDLADS-ELPDG  167 (264)
T ss_dssp             HHTTCCTTCEEEEECCTT-SHHHHHHHHHHCTTSEEEEECSCHHHHHHHHHHHHHHHTSCCTTEEEECSCGGGC-CCCTT
T ss_pred             HHhCCCCCCEEEecCcCC-cHHHHHHHHhhCCCcEEEEecCCHHHHHHHHHhhhhhccCCCceEEEEecccccc-cccCC
Confidence            345589999999999865 7888899998763  89999888776544432   11 1  1 222222221110 11 23


Q ss_pred             CccEEEEcCCC-cccHHHHHhccccCCEEEEec
Q 018067          247 TMDGIIDTVSA-VHPLMPLIGLLKSQGKLVLVG  278 (361)
Q Consensus       247 g~d~vid~~g~-~~~~~~~~~~l~~~G~~v~~g  278 (361)
                      .+|.||--... ...+..+.+.|+++|+++.+-
T Consensus       168 ~fDaV~ldlp~P~~~l~~~~~~LkpGG~lv~~~  200 (264)
T d1i9ga_         168 SVDRAVLDMLAPWEVLDAVSRLLVAGGVLMVYV  200 (264)
T ss_dssp             CEEEEEEESSCGGGGHHHHHHHEEEEEEEEEEE
T ss_pred             CcceEEEecCCHHHHHHHHHhccCCCCEEEEEe
Confidence            68987654544 345788999999999998773

>d1kyqa1 c.2.1.11 (A:1-150) Bifunctional dehydrogenase/ferrochelatase Met8p, N-terminal domain {Baker's yeast (Saccharomyces cerevisiae) [TaxId: 4932]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Siroheme synthase N-terminal domain-like
domain: Bifunctional dehydrogenase/ferrochelatase Met8p, N-terminal domain
species: Baker's yeast (Saccharomyces cerevisiae) [TaxId: 4932]

Probab=95.74  E-value=0.0089  Score=45.48  Aligned_cols=34  Identities=21%  Similarity=0.285  Sum_probs=30.9

Q ss_pred             CCCCEEEEEcCChHHHHHHHHHHHcCCeEEEEeC
Q 018067          182 KPGMHVGVVGLGGLGHVAVKFAKAMGVKVTVIST  215 (361)
Q Consensus       182 ~~g~~vlV~Gag~vG~~a~~la~~~g~~vi~~~~  215 (361)
                      -.|++|||+|+|.+|+.-+..+...|++|++++.
T Consensus        11 l~gkrvLViGgG~va~~ka~~Ll~~GA~VtVvap   44 (150)
T d1kyqa1          11 LKDKRILLIGGGEVGLTRLYKLMPTGCKLTLVSP   44 (150)
T ss_dssp             CTTCEEEEEEESHHHHHHHHHHGGGTCEEEEEEE
T ss_pred             eCCCEEEEECCCHHHHHHHHHHHHCCCEEEEEeC
Confidence            3689999999999999999999999999998864

>d1xeaa1 c.2.1.3 (A:2-122,A:267-312) Putative oxidoreductase VCA1048 {Vibrio cholerae [TaxId: 666]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Glyceraldehyde-3-phosphate dehydrogenase-like, N-terminal domain
domain: Putative oxidoreductase VCA1048
species: Vibrio cholerae [TaxId: 666]

Probab=95.67  E-value=0.036  Score=42.68  Aligned_cols=129  Identities=14%  Similarity=0.138  Sum_probs=79.7

Q ss_pred             EEEEEcCChHHHH-HHHHHHHc-CCeEEEEeCCchhHHHHHHHcCCCEEecCCCHHHHHHhcCCccEEEEcCCCcccHHH
Q 018067          186 HVGVVGLGGLGHV-AVKFAKAM-GVKVTVISTSPSKKSEAIERLGADSFLVSRDQDEMQAAMGTMDGIIDTVSAVHPLMP  263 (361)
Q Consensus       186 ~vlV~Gag~vG~~-a~~la~~~-g~~vi~~~~~~~~~~~~~~~~g~~~vv~~~~~~~~~~~~~g~d~vid~~g~~~~~~~  263 (361)
                      +|.|+|+|.+|.. .+..++.. +..++++++++++...++++++....++.-+ +.+   ...+|+|+-++....-...
T Consensus         3 rvgiiG~G~~~~~~~~~~l~~~~~~~~~~~d~~~~~~~~~~~~~~~~~~~~~~~-~ll---~~~iD~V~I~tp~~~H~~~   78 (167)
T d1xeaa1           3 KIAMIGLGDIAQKAYLPVLAQWPDIELVLCTRNPKVLGTLATRYRVSATCTDYR-DVL---QYGVDAVMIHAATDVHSTL   78 (167)
T ss_dssp             EEEEECCCHHHHHTHHHHHTTSTTEEEEEECSCHHHHHHHHHHTTCCCCCSSTT-GGG---GGCCSEEEECSCGGGHHHH
T ss_pred             EEEEEcCCHHHHHHHHHHHHhCCCcEEEEEECCHHHHHHHHHhcccccccccHH-Hhc---ccccceecccccccccccc
Confidence            5889999999964 56666655 5588878888888888888888754432211 221   2469999988877654666


Q ss_pred             HHhccccCCEEEEecCCCCCcccChH------HHH-hCCcEE-EecccCCHHHHHHHHHHHHcCCCce
Q 018067          264 LIGLLKSQGKLVLVGAPEKPLELPAF------SLL-MGRKIV-GGSMIGGMKETQEMIDFAAKHNIRA  323 (361)
Q Consensus       264 ~~~~l~~~G~~v~~g~~~~~~~~~~~------~~~-~~~~~i-~g~~~~~~~~~~~~~~ll~~~~~~~  323 (361)
                      +..++..| .-+.+.-+   ...+..      ... .++..+ .|. ......+.++++.+..|++-.
T Consensus        79 ~~~al~~g-k~V~~EKP---~~~~~~e~~~l~~~a~~~~~~~~vg~-~r~~~~~~~~~~~~~~G~ig~  141 (167)
T d1xeaa1          79 AAFFLHLG-IPTFVDKP---LAASAQECENLYELAEKHHQPLYVGF-NGFDAMVQDWLQVAAAGKLPT  141 (167)
T ss_dssp             HHHHHHTT-CCEEEESC---SCSSHHHHHHHHHHHHHTTCCEEEEC-GTHHHHHHHHHHHHHHTCCCH
T ss_pred             cccccccc-cccccCCC---CcCCHHHHHHHHHHHHHcCCEEEEEe-CcCCHHHHHHHHHhhcCCCCc
Confidence            77777765 44566432   222221      111 233333 443 333345677778888888763

>d2bkaa1 c.2.1.2 (A:5-236) TAT-interacting protein TIP30 {Human (Homo sapiens) [TaxId: 9606]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Tyrosine-dependent oxidoreductases
domain: TAT-interacting protein TIP30
species: Human (Homo sapiens) [TaxId: 9606]

Probab=95.65  E-value=0.0045  Score=50.88  Aligned_cols=75  Identities=20%  Similarity=0.179  Sum_probs=50.7

Q ss_pred             CCCEEEEEcC-ChHHHHHHHHHHHcCC--eEEEEeCCchhHHHHHHHcCCCE-EecCCCHHHHHHhcCCccEEEEcCCCc
Q 018067          183 PGMHVGVVGL-GGLGHVAVKFAKAMGV--KVTVISTSPSKKSEAIERLGADS-FLVSRDQDEMQAAMGTMDGIIDTVSAV  258 (361)
Q Consensus       183 ~g~~vlV~Ga-g~vG~~a~~la~~~g~--~vi~~~~~~~~~~~~~~~~g~~~-vv~~~~~~~~~~~~~g~d~vid~~g~~  258 (361)
                      .+.+|||+|+ |.+|...++.+...|.  +|+++++.+...... ..-.... +.|..+.+.+.....++|++|.++|..
T Consensus        13 ~~k~IlItGaTG~iG~~l~~~Ll~~g~~~~v~~~~R~~~~~~~~-~~~~i~~~~~D~~~~~~~~~~~~~~d~vi~~~~~~   91 (232)
T d2bkaa1          13 QNKSVFILGASGETGRVLLKEILEQGLFSKVTLIGRRKLTFDEE-AYKNVNQEVVDFEKLDDYASAFQGHDVGFCCLGTT   91 (232)
T ss_dssp             TCCEEEEECTTSHHHHHHHHHHHHHTCCSEEEEEESSCCCCCSG-GGGGCEEEECCGGGGGGGGGGGSSCSEEEECCCCC
T ss_pred             CCCEEEEECCCcHHHHHHHHHHHhCCCCCEEEEEecChhhhccc-ccceeeeeeeccccccccccccccccccccccccc
Confidence            4578999998 9999999999887775  899999865432111 1111222 234444445555557899999999863

>d1ygya1 c.2.1.4 (A:99-282) Phosphoglycerate dehydrogenase {Mycobacterium tuberculosis [TaxId: 1773]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Formate/glycerate dehydrogenases, NAD-domain
domain: Phosphoglycerate dehydrogenase
species: Mycobacterium tuberculosis [TaxId: 1773]

Probab=95.64  E-value=0.022  Score=44.86  Aligned_cols=89  Identities=21%  Similarity=0.207  Sum_probs=62.1

Q ss_pred             CCCCEEEEEcCChHHHHHHHHHHHcCCeEEEEeCCchhHHHHHHHcCCCEEecCCCHHHHHHhcCCccEEEEcCCCc---
Q 018067          182 KPGMHVGVVGLGGLGHVAVKFAKAMGVKVTVISTSPSKKSEAIERLGADSFLVSRDQDEMQAAMGTMDGIIDTVSAV---  258 (361)
Q Consensus       182 ~~g~~vlV~Gag~vG~~a~~la~~~g~~vi~~~~~~~~~~~~~~~~g~~~vv~~~~~~~~~~~~~g~d~vid~~g~~---  258 (361)
                      -.|.++.|+|.|.+|..++++++.+|.+|+..++.......  ...+...    .+   +.++....|+|+-++...   
T Consensus        42 l~~k~vgiiG~G~IG~~va~~~~~fg~~v~~~d~~~~~~~~--~~~~~~~----~~---l~ell~~sDiv~~~~Plt~~T  112 (184)
T d1ygya1          42 IFGKTVGVVGLGRIGQLVAQRIAAFGAYVVAYDPYVSPARA--AQLGIEL----LS---LDDLLARADFISVHLPKTPET  112 (184)
T ss_dssp             CTTCEEEEECCSHHHHHHHHHHHTTTCEEEEECTTSCHHHH--HHHTCEE----CC---HHHHHHHCSEEEECCCCSTTT
T ss_pred             ccceeeeeccccchhHHHHHHhhhccceEEeecCCCChhHH--hhcCcee----cc---HHHHHhhCCEEEEcCCCCchh
Confidence            46889999999999999999999999999999876544322  2334321    11   223334588987765432   


Q ss_pred             --ccHHHHHhccccCCEEEEecC
Q 018067          259 --HPLMPLIGLLKSQGKLVLVGA  279 (361)
Q Consensus       259 --~~~~~~~~~l~~~G~~v~~g~  279 (361)
                        ..-...++.|+++..+|.++.
T Consensus       113 ~~lin~~~l~~mk~~a~lIN~sR  135 (184)
T d1ygya1         113 AGLIDKEALAKTKPGVIIVNAAR  135 (184)
T ss_dssp             TTCBCHHHHTTSCTTEEEEECSC
T ss_pred             hhhhhHHHHhhhCCCceEEEecc
Confidence              112367788888888888875

>d1ydwa1 c.2.1.3 (A:6-133,A:305-360) Probable oxidoreductase At4g09670 {Thale cress (Arabidopsis thaliana) [TaxId: 3702]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Glyceraldehyde-3-phosphate dehydrogenase-like, N-terminal domain
domain: Probable oxidoreductase At4g09670
species: Thale cress (Arabidopsis thaliana) [TaxId: 3702]

Probab=95.60  E-value=0.18  Score=39.18  Aligned_cols=91  Identities=10%  Similarity=0.097  Sum_probs=59.6

Q ss_pred             EEEEEcCChHHHHHHHHHHHc-CCeEEEEe-CCchhHHHHHHHcCCCE-EecCCCHHHHHHhcCCccEEEEcCCCcccHH
Q 018067          186 HVGVVGLGGLGHVAVKFAKAM-GVKVTVIS-TSPSKKSEAIERLGADS-FLVSRDQDEMQAAMGTMDGIIDTVSAVHPLM  262 (361)
Q Consensus       186 ~vlV~Gag~vG~~a~~la~~~-g~~vi~~~-~~~~~~~~~~~~~g~~~-vv~~~~~~~~~~~~~g~d~vid~~g~~~~~~  262 (361)
                      ++.|+|+|.+|...++.++.. +++++.+. .+.++...++++++... .-.+++.+.+.+ ...+|+|+-++....-..
T Consensus         3 ki~iIG~G~~g~~~~~~l~~~~~~~i~ai~d~~~~~~~~~~~~~~~~~~~~~~~~~~~ll~-~~~iD~v~I~tp~~~h~~   81 (184)
T d1ydwa1           3 RIGVMGCADIARKVSRAIHLAPNATISGVASRSLEKAKAFATANNYPESTKIHGSYESLLE-DPEIDALYVPLPTSLHVE   81 (184)
T ss_dssp             EEEEESCCTTHHHHHHHHHHCTTEEEEEEECSSHHHHHHHHHHTTCCTTCEEESSHHHHHH-CTTCCEEEECCCGGGHHH
T ss_pred             EEEEEcCCHHHHHHHHHHHhCCCCEEEEEEeCCccccccchhccccccceeecCcHHHhhh-ccccceeeecccchhhcc
Confidence            578999999999988888876 66887664 45555666777777421 111233332222 247999998887765466


Q ss_pred             HHHhccccCCEEEEec
Q 018067          263 PLIGLLKSQGKLVLVG  278 (361)
Q Consensus       263 ~~~~~l~~~G~~v~~g  278 (361)
                      .+..+++.+ .=+.+.
T Consensus        82 ~~~~~l~~g-~~v~~E   96 (184)
T d1ydwa1          82 WAIKAAEKG-KHILLE   96 (184)
T ss_dssp             HHHHHHTTT-CEEEEC
T ss_pred             hhhhhhhcc-ceeecc
Confidence            777777754 555664

>d1mxha_ c.2.1.2 (A:) Dihydropteridin reductase (pteridine reductase) {Trypanosoma cruzi [TaxId: 5693]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Tyrosine-dependent oxidoreductases
domain: Dihydropteridin reductase (pteridine reductase)
species: Trypanosoma cruzi [TaxId: 5693]

Probab=95.60  E-value=0.024  Score=47.16  Aligned_cols=72  Identities=19%  Similarity=0.230  Sum_probs=47.4

Q ss_pred             EEEEEcC-ChHHHHHHHHHHHcCCeEEEEeCCchhH-HHHHHHc----CCCEEec---C----CCHHHHHH-------hc
Q 018067          186 HVGVVGL-GGLGHVAVKFAKAMGVKVTVISTSPSKK-SEAIERL----GADSFLV---S----RDQDEMQA-------AM  245 (361)
Q Consensus       186 ~vlV~Ga-g~vG~~a~~la~~~g~~vi~~~~~~~~~-~~~~~~~----g~~~vv~---~----~~~~~~~~-------~~  245 (361)
                      ++||.|+ +++|.+++..+...|++|++++++.++. +.+.+++    +.+....   .    ...+.+.+       ..
T Consensus         3 vAlVTGas~GIG~aia~~la~~G~~Vvi~~r~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~   82 (266)
T d1mxha_           3 AAVITGGARRIGHSIAVRLHQQGFRVVVHYRHSEGAAQRLVAELNAARAGSAVLCKGDLSLSSSLLDCCEDIIDCSFRAF   82 (266)
T ss_dssp             EEEETTCSSHHHHHHHHHHHHTTCEEEEEESSCHHHHHHHHHHHHHHSTTCEEEEECCCSSSTTHHHHHHHHHHHHHHHH
T ss_pred             EEEEeCCCCHHHHHHHHHHHHCCCEEEEEECCchHHHHHHHHHHHhhcCCceEEEecccccchhHHHHHHHHHHHHHHHh
Confidence            4678887 9999999999999999999999886543 2332322    3333221   1    11222222       22


Q ss_pred             CCccEEEEcCCC
Q 018067          246 GTMDGIIDTVSA  257 (361)
Q Consensus       246 ~g~d~vid~~g~  257 (361)
                      ++.|++++++|.
T Consensus        83 g~iDilvnnAG~   94 (266)
T d1mxha_          83 GRCDVLVNNASA   94 (266)
T ss_dssp             SCCCEEEECCCC
T ss_pred             CCCCEEEECCcc
Confidence            579999999984

>d1gdha1 c.2.1.4 (A:101-291) D-glycerate dehydrogenase {Hyphomicrobium methylovorum [TaxId: 84]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Formate/glycerate dehydrogenases, NAD-domain
domain: D-glycerate dehydrogenase
species: Hyphomicrobium methylovorum [TaxId: 84]

Probab=95.59  E-value=0.021  Score=45.30  Aligned_cols=90  Identities=13%  Similarity=0.166  Sum_probs=61.3

Q ss_pred             CCCEEEEEcCChHHHHHHHHHHHcCCeEEEEeCCchhHHHHHHHcCCCEEecCCCHHHHHHhcCCccEEEEcCCCc----
Q 018067          183 PGMHVGVVGLGGLGHVAVKFAKAMGVKVTVISTSPSKKSEAIERLGADSFLVSRDQDEMQAAMGTMDGIIDTVSAV----  258 (361)
Q Consensus       183 ~g~~vlV~Gag~vG~~a~~la~~~g~~vi~~~~~~~~~~~~~~~~g~~~vv~~~~~~~~~~~~~g~d~vid~~g~~----  258 (361)
                      .|.++.|+|.|.+|...+++++.+|.+|+..+......... ...+...   ..+   +.++....|+|..++...    
T Consensus        46 ~g~tvgIiG~G~IG~~va~~l~~fg~~v~~~d~~~~~~~~~-~~~~~~~---~~~---l~~ll~~sD~v~l~~plt~~T~  118 (191)
T d1gdha1          46 DNKTLGIYGFGSIGQALAKRAQGFDMDIDYFDTHRASSSDE-ASYQATF---HDS---LDSLLSVSQFFSLNAPSTPETR  118 (191)
T ss_dssp             TTCEEEEECCSHHHHHHHHHHHTTTCEEEEECSSCCCHHHH-HHHTCEE---CSS---HHHHHHHCSEEEECCCCCTTTT
T ss_pred             cccceEEeecccchHHHHHHHHhhccccccccccccccchh-hcccccc---cCC---HHHHHhhCCeEEecCCCCchHh
Confidence            58999999999999999999999999999988765433332 2222211   111   233334578887765431    


Q ss_pred             -ccHHHHHhccccCCEEEEecC
Q 018067          259 -HPLMPLIGLLKSQGKLVLVGA  279 (361)
Q Consensus       259 -~~~~~~~~~l~~~G~~v~~g~  279 (361)
                       ..-...++.++++..+|.++.
T Consensus       119 ~li~~~~l~~mk~~a~lIN~sR  140 (191)
T d1gdha1         119 YFFNKATIKSLPQGAIVVNTAR  140 (191)
T ss_dssp             TCBSHHHHTTSCTTEEEEECSC
T ss_pred             heecHHHhhCcCCccEEEecCC
Confidence             112367788888888888865

>d1g8sa_ c.66.1.3 (A:) Fibrillarin homologue {Archaeon Methanococcus jannaschii [TaxId: 2190]}

class: Alpha and beta proteins (a/b)
fold: S-adenosyl-L-methionine-dependent methyltransferases
superfamily: S-adenosyl-L-methionine-dependent methyltransferases
family: Fibrillarin homologue
domain: Fibrillarin homologue
species: Archaeon Methanococcus jannaschii [TaxId: 2190]

Probab=95.56  E-value=0.032  Score=45.62  Aligned_cols=97  Identities=16%  Similarity=0.121  Sum_probs=62.5

Q ss_pred             CCCCCCEEEEEcCChHHHHHHHHHHHc-CCeEEEEeCCchhHHHHHHHcC---C-CEEe-cCCCHHHHHHhcCCccEEEE
Q 018067          180 LDKPGMHVGVVGLGGLGHVAVKFAKAM-GVKVTVISTSPSKKSEAIERLG---A-DSFL-VSRDQDEMQAAMGTMDGIID  253 (361)
Q Consensus       180 ~~~~g~~vlV~Gag~vG~~a~~la~~~-g~~vi~~~~~~~~~~~~~~~~g---~-~~vv-~~~~~~~~~~~~~g~d~vid  253 (361)
                      .++||++||=+|+|. |..+..+++.. +.+|++++-++...+.+.+...   . ..++ +...+.........+|+++.
T Consensus        71 ~ikpG~~VLDlGcGs-G~~~~~la~~~~~g~V~aVDiS~~~i~~a~~~a~~~~ni~~i~~d~~~~~~~~~~~~~v~~i~~  149 (230)
T d1g8sa_          71 PIKRDSKILYLGASA-GTTPSHVADIADKGIVYAIEYAPRIMRELLDACAERENIIPILGDANKPQEYANIVEKVDVIYE  149 (230)
T ss_dssp             CCCTTCEEEEESCCS-SHHHHHHHHHTTTSEEEEEESCHHHHHHHHHHTTTCTTEEEEECCTTCGGGGTTTCCCEEEEEE
T ss_pred             CCCCCCEEEEeCEEc-CHHHHHHHHhCCCCEEEEEeCcHHHHHHHHHHHhhhcccceEEEeeccCcccccccceeEEeec
Confidence            379999999999864 77788888875 3499999999877666644322   1 1221 22223322222235666766


Q ss_pred             cCCCc----ccHHHHHhccccCCEEEEe
Q 018067          254 TVSAV----HPLMPLIGLLKSQGKLVLV  277 (361)
Q Consensus       254 ~~g~~----~~~~~~~~~l~~~G~~v~~  277 (361)
                      .....    ..+..+.+.|+++|.++..
T Consensus       150 ~~~~~~~~~~~l~~~~r~LKpgG~~~i~  177 (230)
T d1g8sa_         150 DVAQPNQAEILIKNAKWFLKKGGYGMIA  177 (230)
T ss_dssp             CCCSTTHHHHHHHHHHHHEEEEEEEEEE
T ss_pred             cccchHHHHHHHHHHHHhcccCceEEEE
Confidence            55432    2356778899999998765

>d1q0qa2 c.2.1.3 (A:1-125,A:275-300) 1-deoxy-D-xylulose-5-phosphate reductoisomerase {Escherichia coli [TaxId: 562]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Glyceraldehyde-3-phosphate dehydrogenase-like, N-terminal domain
domain: 1-deoxy-D-xylulose-5-phosphate reductoisomerase
species: Escherichia coli [TaxId: 562]

Probab=95.55  E-value=0.082  Score=39.82  Aligned_cols=92  Identities=10%  Similarity=0.273  Sum_probs=67.2

Q ss_pred             EEEEEcC-ChHHHHHHHHHHHc--CCeEEEEe--CCchhHHHHHHHcCCCEEecCCCHH---------------------
Q 018067          186 HVGVVGL-GGLGHVAVKFAKAM--GVKVTVIS--TSPSKKSEAIERLGADSFLVSRDQD---------------------  239 (361)
Q Consensus       186 ~vlV~Ga-g~vG~~a~~la~~~--g~~vi~~~--~~~~~~~~~~~~~g~~~vv~~~~~~---------------------  239 (361)
                      +|.|+|+ |.||..+..+.+..  .++|+..+  ++-+...+.+.+|....++..++..                     
T Consensus         3 ~I~IlGsTGSIG~~tL~Vi~~~~d~f~v~~Lsa~~N~~~L~~q~~~f~pk~v~i~d~~~~~~l~~~l~~~~~~~~~~~g~   82 (151)
T d1q0qa2           3 QLTILGSTGSIGCSTLDVVRHNPEHFRVVALVAGKNVTRMVEQCLEFSPRYAVMDDEASAKLLKTMLQQQGSRTEVLSGQ   82 (151)
T ss_dssp             EEEEETTTSHHHHHHHHHHHHCTTTEEEEEEEESSCHHHHHHHHHHHCCSEEEESSHHHHHHHHHHHHHTTCCCEEEESH
T ss_pred             eEEEEcCCcHHHHHHHHHHHhCCCCcEEEEEEecCcHHHHHHHHHHHhhcccccccHHHHHHHHHHhhhhccccccccCh
Confidence            6899998 99999999999987  35766555  4456677778889887765544321                     


Q ss_pred             -HHHHhc--CCccEEEEcCCCcccHHHHHhccccCCEEEEe
Q 018067          240 -EMQAAM--GTMDGIIDTVSAVHPLMPLIGLLKSQGKLVLV  277 (361)
Q Consensus       240 -~~~~~~--~g~d~vid~~g~~~~~~~~~~~l~~~G~~v~~  277 (361)
                       .+.++.  ..+|+|+.+..+..++...+..++.+-++.+-
T Consensus        83 ~~l~~~~~~~~~D~vi~AI~G~aGL~~t~~aik~gk~iaLA  123 (151)
T d1q0qa2          83 QAACDMAALEDVDQVMAAIVGAAGLLPTLAAIRAGKTILLA  123 (151)
T ss_dssp             HHHHHHHTCTTCCEEEECCSSGGGHHHHHHHHHTTCEEEEC
T ss_pred             HHHHHHhcCCCCCEEEEecCcccHHHHHHHHHhcCCeEEEE
Confidence             111111  26899999998888899999999888776544

>d1nt2a_ c.66.1.3 (A:) Fibrillarin homologue {Archaeon Archaeoglobus fulgidus [TaxId: 2234]}

class: Alpha and beta proteins (a/b)
fold: S-adenosyl-L-methionine-dependent methyltransferases
superfamily: S-adenosyl-L-methionine-dependent methyltransferases
family: Fibrillarin homologue
domain: Fibrillarin homologue
species: Archaeon Archaeoglobus fulgidus [TaxId: 2234]

Probab=95.54  E-value=0.014  Score=47.10  Aligned_cols=98  Identities=12%  Similarity=0.081  Sum_probs=63.1

Q ss_pred             CCCCCCCEEEEEcCChHHHHHHHHHHHcCC-eEEEEeCCchhHHHHH---HHcCCCEEec--CCCHHHHHHhcCCccEEE
Q 018067          179 GLDKPGMHVGVVGLGGLGHVAVKFAKAMGV-KVTVISTSPSKKSEAI---ERLGADSFLV--SRDQDEMQAAMGTMDGII  252 (361)
Q Consensus       179 ~~~~~g~~vlV~Gag~vG~~a~~la~~~g~-~vi~~~~~~~~~~~~~---~~~g~~~vv~--~~~~~~~~~~~~g~d~vi  252 (361)
                      ..++||++||=+|+|. |..+..+++..+. +|+.++-+++..+.+.   ++.+-...+.  ..++.........+|+++
T Consensus        52 l~lkpg~~VLDlGcG~-G~~~~~la~~v~~g~V~gvDis~~~i~~a~~~a~~~~ni~~i~~d~~~~~~~~~~~~~vd~v~  130 (209)
T d1nt2a_          52 LKLRGDERVLYLGAAS-GTTVSHLADIVDEGIIYAVEYSAKPFEKLLELVRERNNIIPLLFDASKPWKYSGIVEKVDLIY  130 (209)
T ss_dssp             CCCCSSCEEEEETCTT-SHHHHHHHHHTTTSEEEEECCCHHHHHHHHHHHHHCSSEEEECSCTTCGGGTTTTCCCEEEEE
T ss_pred             CCCCCCCEEEEeCCcC-CHHHHHHHHhccCCeEEEEeCCHHHHHHHHHHhhccCCceEEEeeccCccccccccceEEEEE
Confidence            3489999999999865 6677788887753 8999999887655443   3333222221  122222222233678887


Q ss_pred             EcCCCcc----cHHHHHhccccCCEEEEe
Q 018067          253 DTVSAVH----PLMPLIGLLKSQGKLVLV  277 (361)
Q Consensus       253 d~~g~~~----~~~~~~~~l~~~G~~v~~  277 (361)
                      .......    .+..+.+.|+++|+++..
T Consensus       131 ~~~~~~~~~~~~l~~~~~~LkpgG~l~i~  159 (209)
T d1nt2a_         131 QDIAQKNQIEILKANAEFFLKEKGEVVIM  159 (209)
T ss_dssp             ECCCSTTHHHHHHHHHHHHEEEEEEEEEE
T ss_pred             ecccChhhHHHHHHHHHHHhccCCeEEEE
Confidence            7554322    356678899999999876

>d1y1pa1 c.2.1.2 (A:2-343) Aldehyde reductase II {Sporobolomyces salmonicolor [TaxId: 5005]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Tyrosine-dependent oxidoreductases
domain: Aldehyde reductase II
species: Sporobolomyces salmonicolor [TaxId: 5005]

Probab=95.53  E-value=0.009  Score=52.02  Aligned_cols=77  Identities=21%  Similarity=0.141  Sum_probs=53.5

Q ss_pred             CCCCCEEEEEcC-ChHHHHHHHHHHHcCCeEEEEeCCchhHHHHHHH----cCCC--EEe--cCCCHHHHHHhcCCccEE
Q 018067          181 DKPGMHVGVVGL-GGLGHVAVKFAKAMGVKVTVISTSPSKKSEAIER----LGAD--SFL--VSRDQDEMQAAMGTMDGI  251 (361)
Q Consensus       181 ~~~g~~vlV~Ga-g~vG~~a~~la~~~g~~vi~~~~~~~~~~~~~~~----~g~~--~vv--~~~~~~~~~~~~~g~d~v  251 (361)
                      +.+|++|||.|+ |-+|...+..+...|.+|++++++.++...+.+.    ....  ..+  |..+.+.+..+..++|.+
T Consensus         8 ~~~gk~VlVTG~sGfIGs~l~~~Ll~~G~~V~~~vR~~~~~~~~~~~~~~~~~~~~~~~~~~Dl~~~~~~~~~~~~~~~v   87 (342)
T d1y1pa1           8 LPEGSLVLVTGANGFVASHVVEQLLEHGYKVRGTARSASKLANLQKRWDAKYPGRFETAVVEDMLKQGAYDEVIKGAAGV   87 (342)
T ss_dssp             SCTTCEEEEETTTSHHHHHHHHHHHHTTCEEEEEESSHHHHHHHHHHHHHHSTTTEEEEECSCTTSTTTTTTTTTTCSEE
T ss_pred             CCCcCEEEEECCCCHHHHHHHHHHHHCcCEEEEEeCCchhHHHHHHhhhccccccccEEEeccccchhhhhhhcccchhh
Confidence            578999999998 9999999988888899999999987655444221    1111  112  233334444455689999


Q ss_pred             EEcCCC
Q 018067          252 IDTVSA  257 (361)
Q Consensus       252 id~~g~  257 (361)
                      +.+++.
T Consensus        88 ~~~a~~   93 (342)
T d1y1pa1          88 AHIASV   93 (342)
T ss_dssp             EECCCC
T ss_pred             hhhccc
Confidence            987765

>d2naca1 c.2.1.4 (A:148-335) Formate dehydrogenase {Pseudomonas sp., strain 101 [TaxId: 306]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Formate/glycerate dehydrogenases, NAD-domain
domain: Formate dehydrogenase
species: Pseudomonas sp., strain 101 [TaxId: 306]

Probab=95.49  E-value=0.031  Score=44.14  Aligned_cols=91  Identities=15%  Similarity=0.120  Sum_probs=62.3

Q ss_pred             CCCCEEEEEcCChHHHHHHHHHHHcCCeEEEEeCCchhHHHHHHHcCCCEEecCCCHHHHHHhcCCccEEEEcCCCc---
Q 018067          182 KPGMHVGVVGLGGLGHVAVKFAKAMGVKVTVISTSPSKKSEAIERLGADSFLVSRDQDEMQAAMGTMDGIIDTVSAV---  258 (361)
Q Consensus       182 ~~g~~vlV~Gag~vG~~a~~la~~~g~~vi~~~~~~~~~~~~~~~~g~~~vv~~~~~~~~~~~~~g~d~vid~~g~~---  258 (361)
                      -.+.++.|+|.|.+|...+++++.+|.+|+..++........ +..+....      ..+.++....|+|+-+..-.   
T Consensus        42 l~~~~vgiiG~G~IG~~va~~l~~fg~~v~~~d~~~~~~~~~-~~~~~~~~------~~l~~~l~~sD~v~~~~plt~~T  114 (188)
T d2naca1          42 LEAMHVGTVAAGRIGLAVLRRLAPFDVHLHYTDRHRLPESVE-KELNLTWH------ATREDMYPVCDVVTLNCPLHPET  114 (188)
T ss_dssp             CTTCEEEEECCSHHHHHHHHHHGGGTCEEEEECSSCCCHHHH-HHHTCEEC------SSHHHHGGGCSEEEECSCCCTTT
T ss_pred             ccccceeeccccccchhhhhhhhccCceEEEEeecccccccc-cccccccc------CCHHHHHHhccchhhcccccccc
Confidence            368899999999999999999999999999998765433222 34443221      12233445688887655432   


Q ss_pred             --ccHHHHHhccccCCEEEEecC
Q 018067          259 --HPLMPLIGLLKSQGKLVLVGA  279 (361)
Q Consensus       259 --~~~~~~~~~l~~~G~~v~~g~  279 (361)
                        ..-...++.++++..+|.++.
T Consensus       115 ~~li~~~~l~~mk~ga~lIN~aR  137 (188)
T d2naca1         115 EHMINDETLKLFKRGAYIVNTAR  137 (188)
T ss_dssp             TTCBSHHHHTTSCTTEEEEECSC
T ss_pred             hhhhHHHHHHhCCCCCEEEecCc
Confidence              123467788888888888865

>d2g82a1 c.2.1.3 (A:1-148,A:311-330) Glyceraldehyde-3-phosphate dehydrogenase (GAPDH) {Thermus aquaticus [TaxId: 271]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Glyceraldehyde-3-phosphate dehydrogenase-like, N-terminal domain
domain: Glyceraldehyde-3-phosphate dehydrogenase (GAPDH)
species: Thermus aquaticus [TaxId: 271]

Probab=95.44  E-value=0.031  Score=43.18  Aligned_cols=95  Identities=20%  Similarity=0.307  Sum_probs=64.3

Q ss_pred             EEEEEcCChHHHHHHHHHHHcCCeEEEEeCCchhHHHHHHHcCC---------C---------------EEecCCCHHHH
Q 018067          186 HVGVVGLGGLGHVAVKFAKAMGVKVTVISTSPSKKSEAIERLGA---------D---------------SFLVSRDQDEM  241 (361)
Q Consensus       186 ~vlV~Gag~vG~~a~~la~~~g~~vi~~~~~~~~~~~~~~~~g~---------~---------------~vv~~~~~~~~  241 (361)
                      +|.|.|-|-+|..+.+.+...+.+++.+.+.. ..+.++.-+..         +               .+...++++.+
T Consensus         2 kigINGfGRIGR~~~R~l~~~~i~iv~INd~~-~~~~~ayLl~yDS~hG~~~~~v~~~~~~l~i~g~~I~~~~~~~p~~i   80 (168)
T d2g82a1           2 KVGINGFGRIGRQVFRILHSRGVEVALINDLT-DNKTLAHLLKYDSIYHRFPGEVAYDDQYLYVDGKAIRATAVKDPKEI   80 (168)
T ss_dssp             EEEEECCSHHHHHHHHHHHHHTCCEEEEECSS-CHHHHHHHHHCCTTTCSCSSCEEECSSEEEETTEEEEEECCSSGGGC
T ss_pred             EEEEECCcHHHHHHHHHHhcCCCEEEEECCCc-chhhhhheeecccccCccccccccccceeEecceeEEEEecCChHHC
Confidence            58899999999999998888889888887764 33333322211         0               11122223334


Q ss_pred             HHhcCCccEEEEcCCCcccHHHHHhccccCCEEEEecCCC
Q 018067          242 QAAMGTMDGIIDTVSAVHPLMPLIGLLKSQGKLVLVGAPE  281 (361)
Q Consensus       242 ~~~~~g~d~vid~~g~~~~~~~~~~~l~~~G~~v~~g~~~  281 (361)
                      .+...|+|+|+||.|.-...+.+...+..+-+-|.+..+.
T Consensus        81 ~W~~~gvdiViEcTG~f~~~~~~~~hl~~gakkViiSAP~  120 (168)
T d2g82a1          81 PWAEAGVGVVIESTGVFTDADKAKAHLEGGAKKVIITAPA  120 (168)
T ss_dssp             CTGGGTEEEEEECSSSCCBHHHHTHHHHTTCSEEEESSCC
T ss_pred             cccccCCceeEeccccccchHHhhhhhccccceeeecccc
Confidence            4444589999999999877888888888776666665554

>d1ks9a2 c.2.1.6 (A:1-167) Ketopantoate reductase PanE {Escherichia coli [TaxId: 562]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: 6-phosphogluconate dehydrogenase-like, N-terminal domain
domain: Ketopantoate reductase PanE
species: Escherichia coli [TaxId: 562]

Probab=95.40  E-value=0.0015  Score=50.78  Aligned_cols=86  Identities=21%  Similarity=0.271  Sum_probs=55.7

Q ss_pred             EEEEEcCChHHHHHHHHHHHcCCeEEEEeCCchhHHHHHHHcCCC-----EEecCCCHHHHHHhcCCccEEEEcCCCccc
Q 018067          186 HVGVVGLGGLGHVAVKFAKAMGVKVTVISTSPSKKSEAIERLGAD-----SFLVSRDQDEMQAAMGTMDGIIDTVSAVHP  260 (361)
Q Consensus       186 ~vlV~Gag~vG~~a~~la~~~g~~vi~~~~~~~~~~~~~~~~g~~-----~vv~~~~~~~~~~~~~g~d~vid~~g~~~~  260 (361)
                      +|+|+|+|.+|.+.+..+...|.+|.++++.+++.... ...+.+     ..+.....+    ....+|++|-++-... 
T Consensus         2 kI~IiGaG~iG~~~a~~L~~~G~~V~~~~r~~~~~~~~-~~~~~~~~~~~~~~~~~~~~----~~~~~D~iii~vka~~-   75 (167)
T d1ks9a2           2 KITVLGCGALGQLWLTALCKQGHEVQGWLRVPQPYCSV-NLVETDGSIFNESLTANDPD----FLATSDLLLVTLKAWQ-   75 (167)
T ss_dssp             EEEEECCSHHHHHHHHHHHHTTCEEEEECSSCCSEEEE-EEECTTSCEEEEEEEESCHH----HHHTCSEEEECSCGGG-
T ss_pred             EEEEECcCHHHHHHHHHHHHCCCceEEEEcCHHHhhhh-ccccCCccccccccccchhh----hhcccceEEEeecccc-
Confidence            68999999999999999988999999999987643222 112211     111122222    2247999999998865 


Q ss_pred             HHHHHh----ccccCCEEEEe
Q 018067          261 LMPLIG----LLKSQGKLVLV  277 (361)
Q Consensus       261 ~~~~~~----~l~~~G~~v~~  277 (361)
                      ....++    .+.++..++.+
T Consensus        76 ~~~~~~~l~~~~~~~~~Iv~~   96 (167)
T d1ks9a2          76 VSDAVKSLASTLPVTTPILLI   96 (167)
T ss_dssp             HHHHHHHHHTTSCTTSCEEEE
T ss_pred             hHHHHHhhccccCcccEEeec
Confidence            444444    44455566665

>d1snya_ c.2.1.2 (A:) Carbonyl reductase sniffer {Fruit fly (Drosophila melanogaster) [TaxId: 7227]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Tyrosine-dependent oxidoreductases
domain: Carbonyl reductase sniffer
species: Fruit fly (Drosophila melanogaster) [TaxId: 7227]

Probab=95.40  E-value=0.0097  Score=49.37  Aligned_cols=73  Identities=12%  Similarity=0.098  Sum_probs=48.3

Q ss_pred             CEEEEEcC-ChHHHHHHHHHH---HcCCeEEEEeCCchhHHHHHH--HcCCC---EEecCCCHHHHH----H---hc--C
Q 018067          185 MHVGVVGL-GGLGHVAVKFAK---AMGVKVTVISTSPSKKSEAIE--RLGAD---SFLVSRDQDEMQ----A---AM--G  246 (361)
Q Consensus       185 ~~vlV~Ga-g~vG~~a~~la~---~~g~~vi~~~~~~~~~~~~~~--~~g~~---~vv~~~~~~~~~----~---~~--~  246 (361)
                      ++|||.|+ +++|.++++.+.   ..|++|+++++++++...+.+  +.+.+   ...|..+++.++    .   ..  +
T Consensus         3 KtilITGas~GIG~a~a~~l~~~a~~g~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~Dvs~~~~v~~~~~~i~~~~~~~   82 (248)
T d1snya_           3 NSILITGCNRGLGLGLVKALLNLPQPPQHLFTTCRNREQAKELEDLAKNHSNIHILEIDLRNFDAYDKLVADIEGVTKDQ   82 (248)
T ss_dssp             SEEEESCCSSHHHHHHHHHHHTSSSCCSEEEEEESCTTSCHHHHHHHHHCTTEEEEECCTTCGGGHHHHHHHHHHHHGGG
T ss_pred             CEEEEeCCCCHHHHHHHHHHHHHHhCCCEEEEEECCHHHHHHHHHHHhcCCcEEEEEEEeccHHHHHHHHhhhHHHhhcC
Confidence            57999998 999999887654   358999999999887655532  11222   123444543222    2   21  4


Q ss_pred             CccEEEEcCCC
Q 018067          247 TMDGIIDTVSA  257 (361)
Q Consensus       247 g~d~vid~~g~  257 (361)
                      ++|++++++|.
T Consensus        83 ~iDiLvnNAg~   93 (248)
T d1snya_          83 GLNVLFNNAGI   93 (248)
T ss_dssp             CCSEEEECCCC
T ss_pred             CcceEEeeccc
Confidence            69999999884

>d1cf2o1 c.2.1.3 (O:1-138,O:304-336) Glyceraldehyde-3-phosphate dehydrogenase (GAPDH) {Archaeon Methanothermus fervidus [TaxId: 2180]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Glyceraldehyde-3-phosphate dehydrogenase-like, N-terminal domain
domain: Glyceraldehyde-3-phosphate dehydrogenase (GAPDH)
species: Archaeon Methanothermus fervidus [TaxId: 2180]

Probab=95.32  E-value=0.14  Score=39.38  Aligned_cols=96  Identities=16%  Similarity=0.171  Sum_probs=63.8

Q ss_pred             EEEEEcCChHHHHHHHHHHHcC-CeEEEEeCCc-hhHHHHHHHcCCCEEecCCCHH------------HHHHhcCCccEE
Q 018067          186 HVGVVGLGGLGHVAVKFAKAMG-VKVTVISTSP-SKKSEAIERLGADSFLVSRDQD------------EMQAAMGTMDGI  251 (361)
Q Consensus       186 ~vlV~Gag~vG~~a~~la~~~g-~~vi~~~~~~-~~~~~~~~~~g~~~vv~~~~~~------------~~~~~~~g~d~v  251 (361)
                      +|.|.|-|-||..+.+.+...+ .+++.+.... ........+++.+......+..            ...++..++|+|
T Consensus         3 ~VgINGfGRIGR~v~R~l~~~~di~vvaInd~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~v~g~~~~~~~~vDvV   82 (171)
T d1cf2o1           3 AVAINGYGTVGKRVADAIAQQDDMKVIGVSKTRPDFEARMALKKGYDLYVAIPERVKLFEKAGIEVAGTVDDMLDEADIV   82 (171)
T ss_dssp             EEEEECCSHHHHHHHHHHHTSSSEEEEEEEESSCSHHHHHHHHTTCCEEESSGGGHHHHHHTTCCCCEEHHHHHHTCSEE
T ss_pred             EEEEEcCcHHHHHHHHHHHhCCCceEEEEecCCcHHHHHHHHhcCCceEecccccceeecccCcccCCChhHhhcCCCEE
Confidence            6889999999999999887765 4777666543 2222233455655433222211            112222479999


Q ss_pred             EEcCCCcccHHHHHhccccCCEEEEecCCC
Q 018067          252 IDTVSAVHPLMPLIGLLKSQGKLVLVGAPE  281 (361)
Q Consensus       252 id~~g~~~~~~~~~~~l~~~G~~v~~g~~~  281 (361)
                      +||+|.-.+...+...+..+-+++..+.+.
T Consensus        83 iEcTG~f~~~~~~~~hl~~G~K~vi~~~~~  112 (171)
T d1cf2o1          83 IDCTPEGIGAKNLKMYKEKGIKAIFQGGEK  112 (171)
T ss_dssp             EECCSTTHHHHHHHHHHHTTCEEEECTTSC
T ss_pred             EEccCCCCCHHHHHHHHHcCCCEEEECCCC
Confidence            999999776777888888888988887654

>d1leha1 c.2.1.7 (A:135-364) Leucine dehydrogenase {Bacillus sphaericus [TaxId: 1421]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Aminoacid dehydrogenase-like, C-terminal domain
domain: Leucine dehydrogenase
species: Bacillus sphaericus [TaxId: 1421]

Probab=95.29  E-value=0.044  Score=44.60  Aligned_cols=50  Identities=30%  Similarity=0.425  Sum_probs=44.2

Q ss_pred             CCCCEEEEEcCChHHHHHHHHHHHcCCeEEEEeCCchhHHHHHHHcCCCE
Q 018067          182 KPGMHVGVVGLGGLGHVAVKFAKAMGVKVTVISTSPSKKSEAIERLGADS  231 (361)
Q Consensus       182 ~~g~~vlV~Gag~vG~~a~~la~~~g~~vi~~~~~~~~~~~~~~~~g~~~  231 (361)
                      -.|.+|+|.|.|.+|..+++++...|+++++++.+..+...+....|...
T Consensus        37 l~g~~v~IqG~GnVG~~~a~~L~~~Gakvv~~d~~~~~~~~~~~~~g~~~   86 (230)
T d1leha1          37 LEGLAVSVQGLGNVAKALCKKLNTEGAKLVVTDVNKAAVSAAVAEEGADA   86 (230)
T ss_dssp             CTTCEEEEECCSHHHHHHHHHHHHTTCEEEEECSCHHHHHHHHHHHCCEE
T ss_pred             CCCCEEEEECCCHHHHHHHHHHHHCCCEEEeecccHHHHHHHHHhcCCcc
Confidence            46899999999999999999999999999999988888777777777653

>d1ve3a1 c.66.1.43 (A:2-227) Hypothetical protein PH0226 {Archaeon Pyrococcus horikoshii [TaxId: 53953]}

class: Alpha and beta proteins (a/b)
fold: S-adenosyl-L-methionine-dependent methyltransferases
superfamily: S-adenosyl-L-methionine-dependent methyltransferases
family: CAC2371-like
domain: Hypothetical protein PH0226
species: Archaeon Pyrococcus horikoshii [TaxId: 53953]

Probab=95.29  E-value=0.017  Score=46.67  Aligned_cols=94  Identities=22%  Similarity=0.234  Sum_probs=59.3

Q ss_pred             CCCCCEEEEEcCChHHHHHHHHHHHcCCeEEEEeCCchhHHHHHH---HcCCC-EEecCCCHHHHHHhcCCccEEEEcCC
Q 018067          181 DKPGMHVGVVGLGGLGHVAVKFAKAMGVKVTVISTSPSKKSEAIE---RLGAD-SFLVSRDQDEMQAAMGTMDGIIDTVS  256 (361)
Q Consensus       181 ~~~g~~vlV~Gag~vG~~a~~la~~~g~~vi~~~~~~~~~~~~~~---~~g~~-~vv~~~~~~~~~~~~~g~d~vid~~g  256 (361)
                      ++++.+||=+|+|. |..+..+++ .|++|+.++.+++....+.+   ..+.. ..+.. +...+....+.+|+|+-.-.
T Consensus        35 l~~~~~ILDiGcG~-G~~~~~la~-~~~~v~giD~S~~~i~~ak~~~~~~~~~~~~~~~-d~~~l~~~~~~fD~I~~~~~  111 (226)
T d1ve3a1          35 MKKRGKVLDLACGV-GGFSFLLED-YGFEVVGVDISEDMIRKAREYAKSRESNVEFIVG-DARKLSFEDKTFDYVIFIDS  111 (226)
T ss_dssp             CCSCCEEEEETCTT-SHHHHHHHH-TTCEEEEEESCHHHHHHHHHHHHHTTCCCEEEEC-CTTSCCSCTTCEEEEEEESC
T ss_pred             cCCCCEEEEECCCc-chhhhhHhh-hhcccccccccccchhhhhhhhcccccccccccc-ccccccccCcCceEEEEecc
Confidence            46888999999875 777778876 48899999998776544432   23322 22221 11111111246999876433


Q ss_pred             Cc--------ccHHHHHhccccCCEEEEe
Q 018067          257 AV--------HPLMPLIGLLKSQGKLVLV  277 (361)
Q Consensus       257 ~~--------~~~~~~~~~l~~~G~~v~~  277 (361)
                      -.        ..+..+.+.|+|||+++..
T Consensus       112 l~~~~~~d~~~~l~~i~~~LkpgG~lii~  140 (226)
T d1ve3a1         112 IVHFEPLELNQVFKEVRRVLKPSGKFIMY  140 (226)
T ss_dssp             GGGCCHHHHHHHHHHHHHHEEEEEEEEEE
T ss_pred             hhhCChhHHHHHHHHHHHHcCcCcEEEEE
Confidence            21        1366788899999998764

>d2avna1 c.66.1.41 (A:1-246) Hypothetical methyltransferase TM1389 {Thermotoga maritima [TaxId: 2336]}

class: Alpha and beta proteins (a/b)
fold: S-adenosyl-L-methionine-dependent methyltransferases
superfamily: S-adenosyl-L-methionine-dependent methyltransferases
family: UbiE/COQ5-like
domain: Hypothetical methyltransferase TM1389
species: Thermotoga maritima [TaxId: 2336]

Probab=95.25  E-value=0.0099  Score=48.80  Aligned_cols=93  Identities=16%  Similarity=0.238  Sum_probs=63.2

Q ss_pred             CCCCCEEEEEcCChHHHHHHHHHHHcCCeEEEEeCCchhHHHHHHHcCCCEEecCCCHHHHHHhcCCccEEEEcCCC---
Q 018067          181 DKPGMHVGVVGLGGLGHVAVKFAKAMGVKVTVISTSPSKKSEAIERLGADSFLVSRDQDEMQAAMGTMDGIIDTVSA---  257 (361)
Q Consensus       181 ~~~g~~vlV~Gag~vG~~a~~la~~~g~~vi~~~~~~~~~~~~~~~~g~~~vv~~~~~~~~~~~~~g~d~vid~~g~---  257 (361)
                      .+++.+||=+|+| .|..+..+++ .|++|+.++.+++....+ ++.+....+.....+ +....+.+|+|+-....   
T Consensus        40 ~~~~~~vLDiGcG-~G~~~~~l~~-~~~~v~giD~s~~~l~~a-~~~~~~~~~~~~~~~-l~~~~~~fD~ii~~~~~~~~  115 (246)
T d2avna1          40 LKNPCRVLDLGGG-TGKWSLFLQE-RGFEVVLVDPSKEMLEVA-REKGVKNVVEAKAED-LPFPSGAFEAVLALGDVLSY  115 (246)
T ss_dssp             CCSCCEEEEETCT-TCHHHHHHHT-TTCEEEEEESCHHHHHHH-HHHTCSCEEECCTTS-CCSCTTCEEEEEECSSHHHH
T ss_pred             cCCCCEEEEECCC-Cchhcccccc-cceEEEEeeccccccccc-ccccccccccccccc-cccccccccceeeecchhhh
Confidence            3578889889998 5888888876 589999999998776555 555554444333222 11112479998864432   


Q ss_pred             ----cccHHHHHhccccCCEEEEe
Q 018067          258 ----VHPLMPLIGLLKSQGKLVLV  277 (361)
Q Consensus       258 ----~~~~~~~~~~l~~~G~~v~~  277 (361)
                          ...+..+.++|++||.++..
T Consensus       116 ~~d~~~~l~~i~r~Lk~gG~~ii~  139 (246)
T d2avna1         116 VENKDKAFSEIRRVLVPDGLLIAT  139 (246)
T ss_dssp             CSCHHHHHHHHHHHEEEEEEEEEE
T ss_pred             hhhHHHHHHHHHhhcCcCcEEEEE
Confidence                22466788899999988764

>d1vl5a_ c.66.1.41 (A:) Hypothetical protein BH2331 {Bacillus halodurans [TaxId: 86665]}

class: Alpha and beta proteins (a/b)
fold: S-adenosyl-L-methionine-dependent methyltransferases
superfamily: S-adenosyl-L-methionine-dependent methyltransferases
family: UbiE/COQ5-like
domain: Hypothetical protein BH2331
species: Bacillus halodurans [TaxId: 86665]

Probab=95.25  E-value=0.012  Score=47.87  Aligned_cols=99  Identities=23%  Similarity=0.175  Sum_probs=63.6

Q ss_pred             hcCCCCCCCEEEEEcCChHHHHHHHHHHHcCCeEEEEeCCchhHHHHH---HHcCCC--EEecCCCHHHHHHhcCCccEE
Q 018067          177 FYGLDKPGMHVGVVGLGGLGHVAVKFAKAMGVKVTVISTSPSKKSEAI---ERLGAD--SFLVSRDQDEMQAAMGTMDGI  251 (361)
Q Consensus       177 ~~~~~~~g~~vlV~Gag~vG~~a~~la~~~g~~vi~~~~~~~~~~~~~---~~~g~~--~vv~~~~~~~~~~~~~g~d~v  251 (361)
                      +...++++++||=+|+| .|..+..+++. |.+|+.++-+++....+.   +..+..  .++..+..+ +.-..+.+|+|
T Consensus         9 ~~~~l~~~~rVLDiGcG-~G~~~~~l~~~-~~~v~gvD~s~~~i~~A~~~~~~~~~~~i~~~~~d~~~-l~~~~~~fD~v   85 (231)
T d1vl5a_           9 QIAALKGNEEVLDVATG-GGHVANAFAPF-VKKVVAFDLTEDILKVARAFIEGNGHQQVEYVQGDAEQ-MPFTDERFHIV   85 (231)
T ss_dssp             HHHTCCSCCEEEEETCT-TCHHHHHHGGG-SSEEEEEESCHHHHHHHHHHHHHTTCCSEEEEECCC-C-CCSCTTCEEEE
T ss_pred             HhcCCCCcCEEEEeccc-CcHHHHHHHHh-CCEEEEEECCHHHHhhhhhccccccccccccccccccc-ccccccccccc
Confidence            34558999999999987 57777777754 789999998876554432   234433  222222211 11112469999


Q ss_pred             EEcCCC------cccHHHHHhccccCCEEEEec
Q 018067          252 IDTVSA------VHPLMPLIGLLKSQGKLVLVG  278 (361)
Q Consensus       252 id~~g~------~~~~~~~~~~l~~~G~~v~~g  278 (361)
                      +-.-.-      ...+..+.+.|+|||+++..-
T Consensus        86 ~~~~~l~~~~d~~~~l~~~~r~LkpgG~l~i~~  118 (231)
T d1vl5a_          86 TCRIAAHHFPNPASFVSEAYRVLKKGGQLLLVD  118 (231)
T ss_dssp             EEESCGGGCSCHHHHHHHHHHHEEEEEEEEEEE
T ss_pred             cccccccccCCHHHHHHHHHHhcCCCcEEEEEe
Confidence            865332      234778999999999998753

>d2pgda2 c.2.1.6 (A:1-176) 6-phosphogluconate dehydrogenase {Sheep (Ovis orientalis aries) [TaxId: 9940]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: 6-phosphogluconate dehydrogenase-like, N-terminal domain
domain: 6-phosphogluconate dehydrogenase
species: Sheep (Ovis orientalis aries) [TaxId: 9940]

Probab=95.24  E-value=0.1  Score=40.41  Aligned_cols=96  Identities=21%  Similarity=0.256  Sum_probs=66.5

Q ss_pred             CEEEEEcCChHHHHHHHHHHHcCCeEEEEeCCchhHHHHHHHcCCC--EEecCCCHHHHHHhcCCccEEEEcCCCccc--
Q 018067          185 MHVGVVGLGGLGHVAVKFAKAMGVKVTVISTSPSKKSEAIERLGAD--SFLVSRDQDEMQAAMGTMDGIIDTVSAVHP--  260 (361)
Q Consensus       185 ~~vlV~Gag~vG~~a~~la~~~g~~vi~~~~~~~~~~~~~~~~g~~--~vv~~~~~~~~~~~~~g~d~vid~~g~~~~--  260 (361)
                      .+|-++|.|.+|...+.-+...|.+|++.++++++.+.+.++ ++.  ........+.........|.++-++.....  
T Consensus         3 ~nIg~IGlG~MG~~mA~~L~~~G~~V~v~dr~~~~~~~l~~~-~~~~~~~~~a~~~~~~~~~~~~~~~ii~~~~~~~~v~   81 (176)
T d2pgda2           3 ADIALIGLAVMGQNLILNMNDHGFVVCAFNRTVSKVDDFLAN-EAKGTKVLGAHSLEEMVSKLKKPRRIILLVKAGQAVD   81 (176)
T ss_dssp             BSEEEECCSHHHHHHHHHHHHTTCCEEEECSSTHHHHHHHHT-TTTTSSCEECSSHHHHHHHBCSSCEEEECSCTTHHHH
T ss_pred             CcEEEEeEhHHHHHHHHHHHHCCCeEEEEcCCHHHHHHHHHh-ccccccccchhhhhhhhhhhcccceEEEecCchHHHH
Confidence            358899999999999999988999999999999988888543 331  111223344455556677888877766432  


Q ss_pred             --HHHHHhccccCCEEEEecCCC
Q 018067          261 --LMPLIGLLKSQGKLVLVGAPE  281 (361)
Q Consensus       261 --~~~~~~~l~~~G~~v~~g~~~  281 (361)
                        .......++++-.++.++...
T Consensus        82 ~v~~~l~~~~~~g~iiid~sT~~  104 (176)
T d2pgda2          82 NFIEKLVPLLDIGDIIIDGGNSE  104 (176)
T ss_dssp             HHHHHHHHHCCTTCEEEECSCCC
T ss_pred             HHHHHHHhccccCcEEEecCcch
Confidence              334555667777777776543

>d1gtea4 c.4.1.1 (A:184-287,A:441-532) Dihydropyrimidine dehydrogenase, domain 2 {Pig (Sus scrofa) [TaxId: 9823]}

class: Alpha and beta proteins (a/b)
fold: Nucleotide-binding domain
superfamily: Nucleotide-binding domain
family: N-terminal domain of adrenodoxin reductase-like
domain: Dihydropyrimidine dehydrogenase, domain 2
species: Pig (Sus scrofa) [TaxId: 9823]

Probab=95.20  E-value=0.0091  Score=47.17  Aligned_cols=36  Identities=14%  Similarity=0.306  Sum_probs=31.4

Q ss_pred             CCCEEEEEcCChHHHHHHHHHHHcCC-eEEEEeCCch
Q 018067          183 PGMHVGVVGLGGLGHVAVKFAKAMGV-KVTVISTSPS  218 (361)
Q Consensus       183 ~g~~vlV~Gag~vG~~a~~la~~~g~-~vi~~~~~~~  218 (361)
                      .+++|+|+|+|+.|+.++..|+..|+ .|+++.+.+.
T Consensus         3 ~~~kVaIIGaGpaGl~aA~~l~~~G~~~V~v~E~~~~   39 (196)
T d1gtea4           3 YSAKIALLGAGPASISCASFLARLGYSDITIFEKQEY   39 (196)
T ss_dssp             GGCCEEEECCSHHHHHHHHHHHHTTCCCEEEEESSSS
T ss_pred             CCCEEEEECChHHHHHHHHHHHHCCCCeEEEEEecCc
Confidence            36789999999999999999999998 5888887653

>d1nvta1 c.2.1.7 (A:111-287) Shikimate 5-dehydrogenase AroE {Archaeon Methanococcus jannaschii [TaxId: 2190]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Aminoacid dehydrogenase-like, C-terminal domain
domain: Shikimate 5-dehydrogenase AroE
species: Archaeon Methanococcus jannaschii [TaxId: 2190]

Probab=95.17  E-value=0.018  Score=45.02  Aligned_cols=72  Identities=10%  Similarity=0.130  Sum_probs=49.9

Q ss_pred             CCCCEEEEEcCChHHHHHHHHHHHcCCeEEEEeCCchhHHHHHHHcCCCE------EecCCCHHHHHHhcCCccEEEEcC
Q 018067          182 KPGMHVGVVGLGGLGHVAVKFAKAMGVKVTVISTSPSKKSEAIERLGADS------FLVSRDQDEMQAAMGTMDGIIDTV  255 (361)
Q Consensus       182 ~~g~~vlV~Gag~vG~~a~~la~~~g~~vi~~~~~~~~~~~~~~~~g~~~------vv~~~~~~~~~~~~~g~d~vid~~  255 (361)
                      -++++|||+|+|+++.+++..+...| +++++.|+.++.+.+++.+....      .++..+   +......+|++++|+
T Consensus        16 ~~~k~vlIlGaGG~arai~~aL~~~~-~i~I~nR~~~ka~~l~~~~~~~~~~~~~~~~~~~~---~~~~~~~~dliIn~t   91 (177)
T d1nvta1          16 VKDKNIVIYGAGGAARAVAFELAKDN-NIIIANRTVEKAEALAKEIAEKLNKKFGEEVKFSG---LDVDLDGVDIIINAT   91 (177)
T ss_dssp             CCSCEEEEECCSHHHHHHHHHHTSSS-EEEEECSSHHHHHHHHHHHHHHHTCCHHHHEEEEC---TTCCCTTCCEEEECS
T ss_pred             cCCCEEEEECCcHHHHHHHHHHcccc-ceeeehhhhhHHHHHHHHHHHhhchhhhhhhhhhh---hhhccchhhhhccCC
Confidence            57889999999999998888876656 89999999988887776654210      000000   111123689999998


Q ss_pred             CC
Q 018067          256 SA  257 (361)
Q Consensus       256 g~  257 (361)
                      ..
T Consensus        92 p~   93 (177)
T d1nvta1          92 PI   93 (177)
T ss_dssp             CT
T ss_pred             cc
Confidence            65

>d1rkxa_ c.2.1.2 (A:) CDP-glucose-4,6-dehydratase {Yersinia pseudotuberculosis [TaxId: 633]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Tyrosine-dependent oxidoreductases
domain: CDP-glucose-4,6-dehydratase
species: Yersinia pseudotuberculosis [TaxId: 633]

Probab=95.16  E-value=0.033  Score=48.24  Aligned_cols=76  Identities=21%  Similarity=0.212  Sum_probs=54.0

Q ss_pred             CCCEEEEEcC-ChHHHHHHHHHHHcCCeEEEEeCCchhHHHHHHHc----CCCE-EecCCCHHHHHHhcC--CccEEEEc
Q 018067          183 PGMHVGVVGL-GGLGHVAVKFAKAMGVKVTVISTSPSKKSEAIERL----GADS-FLVSRDQDEMQAAMG--TMDGIIDT  254 (361)
Q Consensus       183 ~g~~vlV~Ga-g~vG~~a~~la~~~g~~vi~~~~~~~~~~~~~~~~----g~~~-vv~~~~~~~~~~~~~--g~d~vid~  254 (361)
                      .+++|||+|+ |-+|...++.+...|.+|+++++...+...+.+..    +... ..|-.+++.+.++..  .+|+++.+
T Consensus         7 ~~KkILVTG~tGfIGs~lv~~Ll~~g~~V~~~~r~~~~~~~~~~~~~~~~~i~~~~~Dl~d~~~l~~~~~~~~~~~v~~~   86 (356)
T d1rkxa_           7 QGKRVFVTGHTGFKGGWLSLWLQTMGATVKGYSLTAPTVPSLFETARVADGMQSEIGDIRDQNKLLESIREFQPEIVFHM   86 (356)
T ss_dssp             TTCEEEEETTTSHHHHHHHHHHHHTTCEEEEEESSCSSSSCHHHHTTTTTTSEEEECCTTCHHHHHHHHHHHCCSEEEEC
T ss_pred             CCCEEEEECCCCHHHHHHHHHHHHCCCEEEEEECCCCccHHHHhhhhcccCCeEEEeeccChHhhhhhhhhchhhhhhhh
Confidence            5789999998 99999999999999999999998765433332222    1222 224456666555543  78999998


Q ss_pred             CCCc
Q 018067          255 VSAV  258 (361)
Q Consensus       255 ~g~~  258 (361)
                      ++..
T Consensus        87 aa~~   90 (356)
T d1rkxa_          87 AAQP   90 (356)
T ss_dssp             CSCC
T ss_pred             hccc
Confidence            8763

>d2b25a1 c.66.1.13 (A:6-329) Hypothetical protein FLJ20628 {Human (Homo sapiens) [TaxId: 9606]}

class: Alpha and beta proteins (a/b)
fold: S-adenosyl-L-methionine-dependent methyltransferases
superfamily: S-adenosyl-L-methionine-dependent methyltransferases
family: tRNA(1-methyladenosine) methyltransferase-like
domain: Hypothetical protein FLJ20628
species: Human (Homo sapiens) [TaxId: 9606]

Probab=95.12  E-value=0.033  Score=47.99  Aligned_cols=99  Identities=19%  Similarity=0.193  Sum_probs=61.9

Q ss_pred             CCCCCCCEEEEEcCChHHHHHHHHHHHcCC--eEEEEeCCchhHHHHHHHc---C-----------CCEE-ecCCC-HHH
Q 018067          179 GLDKPGMHVGVVGLGGLGHVAVKFAKAMGV--KVTVISTSPSKKSEAIERL---G-----------ADSF-LVSRD-QDE  240 (361)
Q Consensus       179 ~~~~~g~~vlV~Gag~vG~~a~~la~~~g~--~vi~~~~~~~~~~~~~~~~---g-----------~~~v-v~~~~-~~~  240 (361)
                      ..++||++||=.|+|. |.+++.+|+..|.  +|+.++.+++..+.+.+.+   +           .+.+ +...+ .+.
T Consensus        94 l~i~pG~rVLE~GtGs-G~lt~~LAr~vg~~G~V~t~E~~~~~~~~A~~n~~~~~~~~~~~~~~~~~~nv~~~~~di~~~  172 (324)
T d2b25a1          94 MDINPGDTVLEAGSGS-GGMSLFLSKAVGSQGRVISFEVRKDHHDLAKKNYKHWRDSWKLSHVEEWPDNVDFIHKDISGA  172 (324)
T ss_dssp             HTCCTTCEEEEECCTT-SHHHHHHHHHHCTTCEEEEEESSHHHHHHHHHHHHHHHHHHTTTCSSCCCCCEEEEESCTTCC
T ss_pred             hCCCCCCEEEEecccc-cHHHHHHHHHhCCCcEEEEecCCHHHHHHHHHHHHHhhhhhhhhhhhccccceeEEecchhhc
Confidence            4489999999999876 8889999999865  8999999877654442221   1           1111 11111 111


Q ss_pred             HHHhc-CCccEEEEcCCC-cccHHHHHhccccCCEEEEec
Q 018067          241 MQAAM-GTMDGIIDTVSA-VHPLMPLIGLLKSQGKLVLVG  278 (361)
Q Consensus       241 ~~~~~-~g~d~vid~~g~-~~~~~~~~~~l~~~G~~v~~g  278 (361)
                      ...+. ..+|.||--... ...+..+.+.|+|||+++.+-
T Consensus       173 ~~~~~~~~fD~V~LD~p~P~~~l~~~~~~LKpGG~lv~~~  212 (324)
T d2b25a1         173 TEDIKSLTFDAVALDMLNPHVTLPVFYPHLKHGGVCAVYV  212 (324)
T ss_dssp             C-------EEEEEECSSSTTTTHHHHGGGEEEEEEEEEEE
T ss_pred             ccccCCCCcceEeecCcCHHHHHHHHHHhccCCCEEEEEe
Confidence            11122 258877633333 245889999999999999874

>d1edza1 c.2.1.7 (A:149-319) Methylenetetrahydrofolate dehydrogenase/cyclohydrolase {Baker's yeast (Saccharomyces cerevisiae) [TaxId: 4932]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Aminoacid dehydrogenase-like, C-terminal domain
domain: Methylenetetrahydrofolate dehydrogenase/cyclohydrolase
species: Baker's yeast (Saccharomyces cerevisiae) [TaxId: 4932]

Probab=95.05  E-value=0.011  Score=45.80  Aligned_cols=110  Identities=15%  Similarity=0.146  Sum_probs=72.8

Q ss_pred             hhhhhhhhHhhhcCC---------CCCCCEEEEEcC-ChHHHHHHHHHHHcCCeEEEEeCCchhHHHHHHHcCCC-----
Q 018067          166 CAGITVYSPLRFYGL---------DKPGMHVGVVGL-GGLGHVAVKFAKAMGVKVTVISTSPSKKSEAIERLGAD-----  230 (361)
Q Consensus       166 ~~~~ta~~~l~~~~~---------~~~g~~vlV~Ga-g~vG~~a~~la~~~g~~vi~~~~~~~~~~~~~~~~g~~-----  230 (361)
                      |+.......|+++.-         --.|++|+|+|. ..+|.=.+.++...|++|+...+.....  .  ..+.+     
T Consensus         2 cTp~gv~~LL~~y~I~~~~~~~g~~l~GK~vvVIGrS~iVG~Pla~lL~~~gaTVt~~~~~~~~~--~--~~~~~~~~~~   77 (171)
T d1edza1           2 CTPLAIVKILEFLKIYNNLLPEGNRLYGKKCIVINRSEIVGRPLAALLANDGATVYSVDVNNIQK--F--TRGESLKLNK   77 (171)
T ss_dssp             HHHHHHHHHHHHTTCSCTTSCTTCTTTTCEEEEECCCTTTHHHHHHHHHTTSCEEEEECSSEEEE--E--ESCCCSSCCC
T ss_pred             CcHHHHHHHHHHcCcccccccccCCCCCCEEEEECCccccHHHHHHHHHHCCCEEEEeccccccc--c--ccccceeeee
Confidence            444455555554431         247899999996 6789999999999999998776653221  0  01111     


Q ss_pred             -EE--ecCCCHHHHHHhcCCccEEEEcCCCcccHHHHHhccccCCEEEEecCC
Q 018067          231 -SF--LVSRDQDEMQAAMGTMDGIIDTVSAVHPLMPLIGLLKSQGKLVLVGAP  280 (361)
Q Consensus       231 -~v--v~~~~~~~~~~~~~g~d~vid~~g~~~~~~~~~~~l~~~G~~v~~g~~  280 (361)
                       .+  +..-..+.+++....+|+++-++|.+. +..--+.+++|..++++|..
T Consensus        78 ~~~~~~~~~~~~~lk~~~~~aDIvIsavG~p~-~~i~~d~ik~GavvIDvGi~  129 (171)
T d1edza1          78 HHVEDLGEYSEDLLKKCSLDSDVVITGVPSEN-YKFPTEYIKEGAVCINFACT  129 (171)
T ss_dssp             CEEEEEEECCHHHHHHHHHHCSEEEECCCCTT-CCBCTTTSCTTEEEEECSSS
T ss_pred             eccccccccchhHHhhccccCCEEEEccCCCc-cccChhhcccCceEeecccc
Confidence             11  111234556666667999999999876 33345678899999999864

>d2c5aa1 c.2.1.2 (A:13-375) GDP-mannose-3', 5'-epimerase {Thale cress (Arabidopsis thaliana) [TaxId: 3702]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Tyrosine-dependent oxidoreductases
domain: GDP-mannose-3', 5'-epimerase
species: Thale cress (Arabidopsis thaliana) [TaxId: 3702]

Probab=95.03  E-value=0.016  Score=50.60  Aligned_cols=74  Identities=11%  Similarity=0.133  Sum_probs=52.7

Q ss_pred             CCCCEEEEEcC-ChHHHHHHHHHHHcCCeEEEEeCCchhHHHHHHHcC-CC-EEecCCCHHHHHHhcCCccEEEEcCCC
Q 018067          182 KPGMHVGVVGL-GGLGHVAVKFAKAMGVKVTVISTSPSKKSEAIERLG-AD-SFLVSRDQDEMQAAMGTMDGIIDTVSA  257 (361)
Q Consensus       182 ~~g~~vlV~Ga-g~vG~~a~~la~~~g~~vi~~~~~~~~~~~~~~~~g-~~-~vv~~~~~~~~~~~~~g~d~vid~~g~  257 (361)
                      ..+-+|||+|+ |-+|...+..+...|.+|+++++.......  .... .. ...|..+.+....+..++|.|+.+++.
T Consensus        13 ~~nMKILVTGgsGfIGs~lv~~L~~~g~~V~~~d~~~~~~~~--~~~~~~~~~~~D~~~~~~~~~~~~~~d~Vih~a~~   89 (363)
T d2c5aa1          13 SENLKISITGAGGFIASHIARRLKHEGHYVIASDWKKNEHMT--EDMFCDEFHLVDLRVMENCLKVTEGVDHVFNLAAD   89 (363)
T ss_dssp             TSCCEEEEETTTSHHHHHHHHHHHHTTCEEEEEESSCCSSSC--GGGTCSEEEECCTTSHHHHHHHHTTCSEEEECCCC
T ss_pred             CCCCEEEEECCCCHHHHHHHHHHHHCcCEEEEEeCCCccchh--hhcccCcEEEeechhHHHHHHHhhcCCeEeecccc
Confidence            35788999998 999999999999999999998765433211  1112 22 233555566666667799999998864

>d2pv7a2 c.2.1.6 (A:92-243) Prephenate dehydrogenase TyrA {Haemophilus influenzae [TaxId: 727]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: 6-phosphogluconate dehydrogenase-like, N-terminal domain
domain: Prephenate dehydrogenase TyrA
species: Haemophilus influenzae [TaxId: 727]

Probab=94.94  E-value=0.3  Score=36.38  Aligned_cols=73  Identities=21%  Similarity=0.283  Sum_probs=49.2

Q ss_pred             CEEEEEc-CChHHHHHHHHHHHcCCeEEEEeCCchhHHHHHHHcCCCEEecCCCHH----HHHHhc---CCccEEEEcCC
Q 018067          185 MHVGVVG-LGGLGHVAVKFAKAMGVKVTVISTSPSKKSEAIERLGADSFLVSRDQD----EMQAAM---GTMDGIIDTVS  256 (361)
Q Consensus       185 ~~vlV~G-ag~vG~~a~~la~~~g~~vi~~~~~~~~~~~~~~~~g~~~vv~~~~~~----~~~~~~---~g~d~vid~~g  256 (361)
                      ++|.|+| .|.+|...+..++..|.+|.+.++......... .-+++.++......    .+.++.   ..=.+++|+.+
T Consensus        10 ~kI~iIGg~G~mG~~la~~L~~~G~~V~~~d~~~~~~~~~~-~~~~~~v~~~~~~~~~~~v~~~~~~~~~~~~iiiD~~S   88 (152)
T d2pv7a2          10 HKIVIVGGYGKLGGLFARYLRASGYPISILDREDWAVAESI-LANADVVIVSVPINLTLETIERLKPYLTENMLLADLTS   88 (152)
T ss_dssp             CCEEEETTTSHHHHHHHHHHHTTTCCEEEECTTCGGGHHHH-HTTCSEEEECSCGGGHHHHHHHHGGGCCTTSEEEECCS
T ss_pred             CeEEEEcCCCHHHHHHHHHHHHcCCCcEecccccccccchh-hhhccccccccchhhheeeeecccccccCCceEEEecc
Confidence            5799999 699999999999999999999999876655442 34566555444432    222222   12346777766


Q ss_pred             Cc
Q 018067          257 AV  258 (361)
Q Consensus       257 ~~  258 (361)
                      ..
T Consensus        89 vk   90 (152)
T d2pv7a2          89 VK   90 (152)
T ss_dssp             CC
T ss_pred             cC
Confidence            53

>d1id1a_ c.2.1.9 (A:) Rck domain from putative potassium channel Kch {Escherichia coli [TaxId: 562]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Potassium channel NAD-binding domain
domain: Rck domain from putative potassium channel Kch
species: Escherichia coli [TaxId: 562]

Probab=94.92  E-value=0.1  Score=39.33  Aligned_cols=93  Identities=24%  Similarity=0.145  Sum_probs=61.5

Q ss_pred             CEEEEEcCChHHHHHHHHHHHcCCeEEEEeCCchhHHHHHHHc---CCCEEe-cCCCHHHHHHhc-CCccEEEEcCCCcc
Q 018067          185 MHVGVVGLGGLGHVAVKFAKAMGVKVTVISTSPSKKSEAIERL---GADSFL-VSRDQDEMQAAM-GTMDGIIDTVSAVH  259 (361)
Q Consensus       185 ~~vlV~Gag~vG~~a~~la~~~g~~vi~~~~~~~~~~~~~~~~---g~~~vv-~~~~~~~~~~~~-~g~d~vid~~g~~~  259 (361)
                      ++++|.|.|.+|..+++.+...|.++++++..+++.....+++   |...+. |..+++.++++. ..+|.++-+.+...
T Consensus         4 nHiII~G~g~~g~~l~~~L~~~~~~v~vId~d~~~~~~~~~~~~~~~~~vi~Gd~~d~~~L~~a~i~~a~~vi~~~~~d~   83 (153)
T d1id1a_           4 DHFIVCGHSILAINTILQLNQRGQNVTVISNLPEDDIKQLEQRLGDNADVIPGDSNDSSVLKKAGIDRCRAILALSDNDA   83 (153)
T ss_dssp             SCEEEECCSHHHHHHHHHHHHTTCCEEEEECCCHHHHHHHHHHHCTTCEEEESCTTSHHHHHHHTTTTCSEEEECSSCHH
T ss_pred             CEEEEECCCHHHHHHHHHHHHcCCCEEEEeccchhHHHHHHHhhcCCcEEEEccCcchHHHHHhccccCCEEEEccccHH
Confidence            4699999999999999999999999999998876544333332   443332 345566666554 47999998888754


Q ss_pred             cHHH---HHhccccCCEEEEe
Q 018067          260 PLMP---LIGLLKSQGKLVLV  277 (361)
Q Consensus       260 ~~~~---~~~~l~~~G~~v~~  277 (361)
                      .-..   ..+.+.+.-+++..
T Consensus        84 ~n~~~~~~~r~~~~~~~iia~  104 (153)
T d1id1a_          84 DNAFVVLSAKDMSSDVKTVLA  104 (153)
T ss_dssp             HHHHHHHHHHHHTSSSCEEEE
T ss_pred             HHHHHHHHHHHhCCCCceEEE
Confidence            1111   22233455555554

>d2voua1 c.3.1.2 (A:2-163,A:292-394) Dihydroxypyridine hydroxylase DhpH {Arthrobacter nicotinovorans [TaxId: 29320]}

class: Alpha and beta proteins (a/b)
fold: FAD/NAD(P)-binding domain
superfamily: FAD/NAD(P)-binding domain
family: FAD-linked reductases, N-terminal domain
domain: Dihydroxypyridine hydroxylase DhpH
species: Arthrobacter nicotinovorans [TaxId: 29320]

Probab=94.91  E-value=0.016  Score=47.98  Aligned_cols=35  Identities=31%  Similarity=0.350  Sum_probs=31.5

Q ss_pred             CCCEEEEEcCChHHHHHHHHHHHcCCeEEEEeCCc
Q 018067          183 PGMHVGVVGLGGLGHVAVKFAKAMGVKVTVISTSP  217 (361)
Q Consensus       183 ~g~~vlV~Gag~vG~~a~~la~~~g~~vi~~~~~~  217 (361)
                      ..++|+|+|+|+.|++++..+...|.+|+++.+.+
T Consensus         3 ~~~kV~IiGaG~aGl~~A~~L~~~G~~v~v~Er~~   37 (265)
T d2voua1           3 TTDRIAVVGGSISGLTAALMLRDAGVDVDVYERSP   37 (265)
T ss_dssp             CCSEEEEECCSHHHHHHHHHHHHTTCEEEEECSSS
T ss_pred             CCCcEEEECcCHHHHHHHHHHHHCCCCEEEEeCCC
Confidence            45789999999999999999999999999998753

>d1l3ia_ c.66.1.22 (A:) Precorrin-6Y methyltransferase (CbiT) {Archaeon Methanobacterium thermoautotrophicum [TaxId: 145262]}

class: Alpha and beta proteins (a/b)
fold: S-adenosyl-L-methionine-dependent methyltransferases
superfamily: S-adenosyl-L-methionine-dependent methyltransferases
family: Precorrin-6Y methyltransferase (CbiT)
domain: Precorrin-6Y methyltransferase (CbiT)
species: Archaeon Methanobacterium thermoautotrophicum [TaxId: 145262]

Probab=94.91  E-value=0.085  Score=41.24  Aligned_cols=96  Identities=22%  Similarity=0.215  Sum_probs=59.9

Q ss_pred             CCCCCCEEEEEcCChHHHHHHHHHHHcCCeEEEEeCCchhHHHHH---HHcCCC-EE-ecCCCHHHHHHhcCCccEEEEc
Q 018067          180 LDKPGMHVGVVGLGGLGHVAVKFAKAMGVKVTVISTSPSKKSEAI---ERLGAD-SF-LVSRDQDEMQAAMGTMDGIIDT  254 (361)
Q Consensus       180 ~~~~g~~vlV~Gag~vG~~a~~la~~~g~~vi~~~~~~~~~~~~~---~~~g~~-~v-v~~~~~~~~~~~~~g~d~vid~  254 (361)
                      .+++|++||=+|+|. |..++.+|+. +.+|+.++.+++..+.+.   +++|.. .+ +-..+..........+|.|+-.
T Consensus        30 ~~~~g~~VLDiGcGs-G~~s~~lA~~-~~~V~avD~~~~~l~~a~~n~~~~gl~~~v~~~~gda~~~~~~~~~~D~v~~~  107 (186)
T d1l3ia_          30 EPGKNDVAVDVGCGT-GGVTLELAGR-VRRVYAIDRNPEAISTTEMNLQRHGLGDNVTLMEGDAPEALCKIPDIDIAVVG  107 (186)
T ss_dssp             CCCTTCEEEEESCTT-SHHHHHHHTT-SSEEEEEESCHHHHHHHHHHHHHTTCCTTEEEEESCHHHHHTTSCCEEEEEES
T ss_pred             CCCCCCEEEEEECCe-Eccccccccc-ceEEEEecCCHHHHHHHHHHHHHcCCCcceEEEECchhhcccccCCcCEEEEe
Confidence            479999998898753 4445566654 569999999887654442   345642 21 2222322222223479998865


Q ss_pred             CCCc---ccHHHHHhccccCCEEEEe
Q 018067          255 VSAV---HPLMPLIGLLKSQGKLVLV  277 (361)
Q Consensus       255 ~g~~---~~~~~~~~~l~~~G~~v~~  277 (361)
                      ....   ..++.+.+.|+++|+++..
T Consensus       108 ~~~~~~~~~~~~~~~~LkpgG~lvi~  133 (186)
T d1l3ia_         108 GSGGELQEILRIIKDKLKPGGRIIVT  133 (186)
T ss_dssp             CCTTCHHHHHHHHHHTEEEEEEEEEE
T ss_pred             CccccchHHHHHHHHHhCcCCEEEEE
Confidence            4432   2366778899999998765

>d1qsga_ c.2.1.2 (A:) Enoyl-ACP reductase {Escherichia coli [TaxId: 562]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Tyrosine-dependent oxidoreductases
domain: Enoyl-ACP reductase
species: Escherichia coli [TaxId: 562]

Probab=94.88  E-value=0.045  Score=45.23  Aligned_cols=76  Identities=14%  Similarity=0.259  Sum_probs=49.5

Q ss_pred             CCCCEEEEEcC-C--hHHHHHHHHHHHcCCeEEEEeCCchhHHHH---HHHcCCCEEe--cCCCHHHHH----H---hcC
Q 018067          182 KPGMHVGVVGL-G--GLGHVAVKFAKAMGVKVTVISTSPSKKSEA---IERLGADSFL--VSRDQDEMQ----A---AMG  246 (361)
Q Consensus       182 ~~g~~vlV~Ga-g--~vG~~a~~la~~~g~~vi~~~~~~~~~~~~---~~~~g~~~vv--~~~~~~~~~----~---~~~  246 (361)
                      -.|+++||.|+ |  ++|.+++..+...|++|+++.++++....+   ....+....+  +..+...+.    .   ..+
T Consensus         3 L~gK~~lITGass~~GIG~aiA~~l~~~G~~V~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~   82 (258)
T d1qsga_           3 LSGKRILVTGVASKLSIAYGIAQAMHREGAELAFTYQNDKLKGRVEEFAAQLGSDIVLQCDVAEDASIDTMFAELGKVWP   82 (258)
T ss_dssp             TTTCEEEECCCCSTTSHHHHHHHHHHHTTCEEEEEESSTTTHHHHHHHHHHTTCCCEEECCTTCHHHHHHHHHHHHTTCS
T ss_pred             CCCCEEEEECCCCchhHHHHHHHHHHHcCCEEEEEeCCHHHHHHHHHHHhhcCCcceeecccchHHHHHHHHHHhhhccc
Confidence            46899999987 6  699999999999999999999886543332   2333332222  223322222    1   124


Q ss_pred             CccEEEEcCCC
Q 018067          247 TMDGIIDTVSA  257 (361)
Q Consensus       247 g~d~vid~~g~  257 (361)
                      ..|+.+++++.
T Consensus        83 ~~d~~v~~a~~   93 (258)
T d1qsga_          83 KFDGFVHSIGF   93 (258)
T ss_dssp             SEEEEEECCCC
T ss_pred             ccceEEEeecc
Confidence            68999998764

>d1nvmb1 c.2.1.3 (B:1-131,B:287-312) Acetaldehyde dehydrogenase (acylating) {Pseudomonas sp. [TaxId: 306]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Glyceraldehyde-3-phosphate dehydrogenase-like, N-terminal domain
domain: Acetaldehyde dehydrogenase (acylating)
species: Pseudomonas sp. [TaxId: 306]

Probab=94.84  E-value=0.11  Score=39.41  Aligned_cols=93  Identities=15%  Similarity=0.256  Sum_probs=58.2

Q ss_pred             CEEEEEcCChHHH-HHHHHHHHcC-CeEEEEeCCc-h-hHHHHHHHcCCCEEecCCCHHHHHHhc--CCccEEEEcCCCc
Q 018067          185 MHVGVVGLGGLGH-VAVKFAKAMG-VKVTVISTSP-S-KKSEAIERLGADSFLVSRDQDEMQAAM--GTMDGIIDTVSAV  258 (361)
Q Consensus       185 ~~vlV~Gag~vG~-~a~~la~~~g-~~vi~~~~~~-~-~~~~~~~~~g~~~vv~~~~~~~~~~~~--~g~d~vid~~g~~  258 (361)
                      =++.|+|+|.+|. ..+++++... .+++.+++.+ + +....++++|....  +...+.+.+..  .++|+||+++...
T Consensus         5 irvaIIGaG~ig~~~~~~~l~~~~~~el~avas~~~~~~~~~~a~~~~i~~~--~~~~d~l~~~~~~~~iDiVf~ATpag   82 (157)
T d1nvmb1           5 LKVAIIGSGNIGTDLMIKVLRNAKYLEMGAMVGIDAASDGLARAQRMGVTTT--YAGVEGLIKLPEFADIDFVFDATSAS   82 (157)
T ss_dssp             EEEEEECCSHHHHHHHHHHHHHCSSEEEEEEECSCTTCHHHHHHHHTTCCEE--SSHHHHHHHSGGGGGEEEEEECSCHH
T ss_pred             cEEEEEcCcHHHHHHHHHHHhhCCcceEEEEEecchhccchhhhhhcCCccc--ccceeeeeecccccccCEEEEcCCch
Confidence            3689999999986 5678887764 4787776543 2 23345577886532  33333333322  3799999988753


Q ss_pred             ccHHH--HHhccccCCEEEEecC
Q 018067          259 HPLMP--LIGLLKSQGKLVLVGA  279 (361)
Q Consensus       259 ~~~~~--~~~~l~~~G~~v~~g~  279 (361)
                      .-...  +.+.++.|-.+++...
T Consensus        83 ~h~~~~~~~~aa~~G~~VID~s~  105 (157)
T d1nvmb1          83 AHVQNEALLRQAKPGIRLIDLTP  105 (157)
T ss_dssp             HHHHHHHHHHHHCTTCEEEECST
T ss_pred             hHHHhHHHHHHHHcCCEEEEccc
Confidence            21333  3445677777877764

>d1zx0a1 c.66.1.16 (A:8-236) Guanidinoacetate methyltransferase {Human (Homo sapiens) [TaxId: 9606]}

class: Alpha and beta proteins (a/b)
fold: S-adenosyl-L-methionine-dependent methyltransferases
superfamily: S-adenosyl-L-methionine-dependent methyltransferases
family: Guanidinoacetate methyltransferase
domain: Guanidinoacetate methyltransferase
species: Human (Homo sapiens) [TaxId: 9606]

Probab=94.83  E-value=0.016  Score=47.36  Aligned_cols=95  Identities=21%  Similarity=0.129  Sum_probs=60.6

Q ss_pred             CCCCEEEEEcCChHHHHHHHHHHHcCCeEEEEeCCchhHHHHHHHcC---CCEEecCCCHHH-HHHhc-CCccEE-EEcC
Q 018067          182 KPGMHVGVVGLGGLGHVAVKFAKAMGVKVTVISTSPSKKSEAIERLG---ADSFLVSRDQDE-MQAAM-GTMDGI-IDTV  255 (361)
Q Consensus       182 ~~g~~vlV~Gag~vG~~a~~la~~~g~~vi~~~~~~~~~~~~~~~~g---~~~vv~~~~~~~-~~~~~-~g~d~v-id~~  255 (361)
                      .+|.+||-+|+|. |..+..+++..+.+|++++.+++..+.+.+.+.   ....+...+... ...+. +.+|.+ ||.+
T Consensus        52 ~~g~~VLdIGcG~-G~~a~~~a~~~~~~v~~id~s~~~~~~a~~~~~~~~~~~~~~~~~~~~~~~~~~~~~fD~i~fD~~  130 (229)
T d1zx0a1          52 SKGGRVLEVGFGM-AIAASKVQEAPIDEHWIIECNDGVFQRLRDWAPRQTHKVIPLKGLWEDVAPTLPDGHFDGILYDTY  130 (229)
T ss_dssp             TTCEEEEEECCTT-SHHHHHHHTSCEEEEEEEECCHHHHHHHHHHGGGCSSEEEEEESCHHHHGGGSCTTCEEEEEECCC
T ss_pred             cCCCeEEEeeccc-hHHHHHHHHcCCCeEEEeCCCHHHHHHHHHHhhhcccccccccccccccccccccccccceeeccc
Confidence            6788999999864 778888888777799999888776655533332   111111222222 22222 368887 5665


Q ss_pred             CCcc----------cHHHHHhccccCCEEEEe
Q 018067          256 SAVH----------PLMPLIGLLKSQGKLVLV  277 (361)
Q Consensus       256 g~~~----------~~~~~~~~l~~~G~~v~~  277 (361)
                      ....          .+..+.+.|+|||.++..
T Consensus       131 ~~~~~~~~~~~~~~~~~~~~r~LkpGG~~~~~  162 (229)
T d1zx0a1         131 PLSEETWHTHQFNFIKNHAFRLLKPGGVLTYC  162 (229)
T ss_dssp             CCBGGGTTTHHHHHHHHTHHHHEEEEEEEEEC
T ss_pred             ccccccccccCHHHHHHHHHHHcCCCcEEEEE
Confidence            4321          345688899999999764

>d1mo9a2 c.3.1.5 (A:193-313) NADH-dependent 2-ketopropyl coenzyme M oxidoreductase/carboxylase {Xanthobacter sp., py2 [TaxId: 35809]}

class: Alpha and beta proteins (a/b)
fold: FAD/NAD(P)-binding domain
superfamily: FAD/NAD(P)-binding domain
family: FAD/NAD-linked reductases, N-terminal and central domains
domain: NADH-dependent 2-ketopropyl coenzyme M oxidoreductase/carboxylase
species: Xanthobacter sp., py2 [TaxId: 35809]

Probab=94.83  E-value=0.035  Score=40.16  Aligned_cols=38  Identities=24%  Similarity=0.187  Sum_probs=34.4

Q ss_pred             CCCCCCEEEEEcCChHHHHHHHHHHHcCCeEEEEeCCc
Q 018067          180 LDKPGMHVGVVGLGGLGHVAVKFAKAMGVKVTVISTSP  217 (361)
Q Consensus       180 ~~~~g~~vlV~Gag~vG~~a~~la~~~g~~vi~~~~~~  217 (361)
                      ...++++|+|+|+|.+|+=.++.++.+|.+|.++.+.+
T Consensus        18 ~~~~~~~vvVvGgG~ig~E~A~~l~~~g~~vt~i~~~~   55 (121)
T d1mo9a2          18 DYEPGSTVVVVGGSKTAVEYGCFFNATGRRTVMLVRTE   55 (121)
T ss_dssp             CSCCCSEEEEECCSHHHHHHHHHHHHTTCEEEEECSSC
T ss_pred             hhCCCCEEEEECCCHHHHHHHHHHHhcchhheEeeccc
Confidence            35788999999999999999999999999999998865

>d2b69a1 c.2.1.2 (A:4-315) UDP-glucuronate decarboxylase 1 {Human (Homo sapiens) [TaxId: 9606]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Tyrosine-dependent oxidoreductases
domain: UDP-glucuronate decarboxylase 1
species: Human (Homo sapiens) [TaxId: 9606]

Probab=94.81  E-value=0.0047  Score=53.19  Aligned_cols=72  Identities=18%  Similarity=0.132  Sum_probs=44.0

Q ss_pred             CEEEEEcC-ChHHHHHHHHHHHcCCeEEEEeCCch-hHHHHHHHcCCCEEecCCCHHHHHHhcCCccEEEEcCCC
Q 018067          185 MHVGVVGL-GGLGHVAVKFAKAMGVKVTVISTSPS-KKSEAIERLGADSFLVSRDQDEMQAAMGTMDGIIDTVSA  257 (361)
Q Consensus       185 ~~vlV~Ga-g~vG~~a~~la~~~g~~vi~~~~~~~-~~~~~~~~~g~~~vv~~~~~~~~~~~~~g~d~vid~~g~  257 (361)
                      ++|||.|+ |-+|...+..+...|.+|+++++... +...+ ...-...-++..+.+....+..++|+||.+++.
T Consensus         2 KKIlVtG~sGfiG~~lv~~L~~~g~~V~~~d~~~~~~~~~~-~~~~~~~~~d~~~~~~~~~~~~~~d~VihlAa~   75 (312)
T d2b69a1           2 KRILITGGAGFVGSHLTDKLMMDGHEVTVVDNFFTGRKRNV-EHWIGHENFELINHDVVEPLYIEVDQIYHLASP   75 (312)
T ss_dssp             CEEEEETTTSHHHHHHHHHHHHTTCEEEEEECCSSCCGGGT-GGGTTCTTEEEEECCTTSCCCCCCSEEEECCSC
T ss_pred             CEEEEECCCcHHHHHHHHHHHHCcCEEEEEeCCCcCCHHHH-HHhcCCCceEEEehHHHHHHHcCCCEEEECccc
Confidence            57999998 99999999999889999999875322 22222 111111001111112222333479999998864

>d1seza1 c.3.1.2 (A:13-329,A:442-497) Protoporphyrinogen oxidase {Tobacco (Nicotiana tabacum) [TaxId: 4097]}

class: Alpha and beta proteins (a/b)
fold: FAD/NAD(P)-binding domain
superfamily: FAD/NAD(P)-binding domain
family: FAD-linked reductases, N-terminal domain
domain: Protoporphyrinogen oxidase
species: Tobacco (Nicotiana tabacum) [TaxId: 4097]

Probab=94.79  E-value=0.015  Score=49.01  Aligned_cols=34  Identities=32%  Similarity=0.368  Sum_probs=30.8

Q ss_pred             CCEEEEEcCChHHHHHHHHHHHcCCeEEEEeCCc
Q 018067          184 GMHVGVVGLGGLGHVAVKFAKAMGVKVTVISTSP  217 (361)
Q Consensus       184 g~~vlV~Gag~vG~~a~~la~~~g~~vi~~~~~~  217 (361)
                      |++|+|+|+|..|++++..|+..|.+|+++...+
T Consensus         1 ~KkV~IIGaG~aGL~aA~~La~~G~~V~vlE~~~   34 (373)
T d1seza1           1 AKRVAVIGAGVSGLAAAYKLKIHGLNVTVFEAEG   34 (373)
T ss_dssp             CCEEEEECCSHHHHHHHHHHHTTSCEEEEECSSS
T ss_pred             CCEEEEECcCHHHHHHHHHHHhCCCCEEEEeCCC
Confidence            5789999999999999999999999999997653

>d1ebda2 c.3.1.5 (A:155-271) Dihydrolipoamide dehydrogenase {Bacillus stearothermophilus [TaxId: 1422]}

class: Alpha and beta proteins (a/b)
fold: FAD/NAD(P)-binding domain
superfamily: FAD/NAD(P)-binding domain
family: FAD/NAD-linked reductases, N-terminal and central domains
domain: Dihydrolipoamide dehydrogenase
species: Bacillus stearothermophilus [TaxId: 1422]

Probab=94.76  E-value=0.026  Score=40.65  Aligned_cols=36  Identities=22%  Similarity=0.219  Sum_probs=32.5

Q ss_pred             CCCCEEEEEcCChHHHHHHHHHHHcCCeEEEEeCCc
Q 018067          182 KPGMHVGVVGLGGLGHVAVKFAKAMGVKVTVISTSP  217 (361)
Q Consensus       182 ~~g~~vlV~Gag~vG~~a~~la~~~g~~vi~~~~~~  217 (361)
                      +.+++++|+|+|.+|+=+++.+..+|.+|.++.+.+
T Consensus        20 ~~p~~v~IiGgG~ig~E~A~~l~~~G~~Vtlve~~~   55 (117)
T d1ebda2          20 EVPKSLVVIGGGYIGIELGTAYANFGTKVTILEGAG   55 (117)
T ss_dssp             SCCSEEEEECCSHHHHHHHHHHHHTTCEEEEEESSS
T ss_pred             hcCCeEEEECCCccceeeeeeecccccEEEEEEecc
Confidence            445789999999999999999999999999998765

>d1p3da1 c.5.1.1 (A:11-106) UDP-N-acetylmuramate-alanine ligase MurC {Haemophilus influenzae [TaxId: 727]}

class: Alpha and beta proteins (a/b)
fold: MurCD N-terminal domain
superfamily: MurCD N-terminal domain
family: MurCD N-terminal domain
domain: UDP-N-acetylmuramate-alanine ligase MurC
species: Haemophilus influenzae [TaxId: 727]

Probab=94.71  E-value=0.17  Score=34.76  Aligned_cols=73  Identities=10%  Similarity=0.243  Sum_probs=51.1

Q ss_pred             CCCCCCEEEEEcCChHHHHH-HHHHHHcCCeEEEEeCCchhHHHHHHHcCCCEEecCCCHHHHHHhcCCccEEEEcCCC
Q 018067          180 LDKPGMHVGVVGLGGLGHVA-VKFAKAMGVKVTVISTSPSKKSEAIERLGADSFLVSRDQDEMQAAMGTMDGIIDTVSA  257 (361)
Q Consensus       180 ~~~~g~~vlV~Gag~vG~~a-~~la~~~g~~vi~~~~~~~~~~~~~~~~g~~~vv~~~~~~~~~~~~~g~d~vid~~g~  257 (361)
                      ..+..+++.++|-|++|..+ +++++..|+.|...+..........++.|+... ...+++.+    .++|.|+-+.+-
T Consensus         4 ~~~~~~~ihfiGigG~GMs~LA~~L~~~G~~VsGSD~~~~~~~~~L~~~Gi~v~-~g~~~~~i----~~~d~vV~S~AI   77 (96)
T d1p3da1           4 EMRRVQQIHFIGIGGAGMSGIAEILLNEGYQISGSDIADGVVTQRLAQAGAKIY-IGHAEEHI----EGASVVVVSSAI   77 (96)
T ss_dssp             CCTTCCEEEEETTTSTTHHHHHHHHHHHTCEEEEEESCCSHHHHHHHHTTCEEE-ESCCGGGG----TTCSEEEECTTS
T ss_pred             cchhCCEEEEEEECHHHHHHHHHHHHhCCCEEEEEeCCCChhhhHHHHCCCeEE-ECCccccC----CCCCEEEECCCc
Confidence            34677889999998889777 899999999999999875544344466787643 33343332    357887766554

>d1onfa2 c.3.1.5 (A:154-270) Glutathione reductase {Plasmodium falciparum [TaxId: 5833]}

class: Alpha and beta proteins (a/b)
fold: FAD/NAD(P)-binding domain
superfamily: FAD/NAD(P)-binding domain
family: FAD/NAD-linked reductases, N-terminal and central domains
domain: Glutathione reductase
species: Plasmodium falciparum [TaxId: 5833]

Probab=94.64  E-value=0.029  Score=40.55  Aligned_cols=37  Identities=19%  Similarity=0.365  Sum_probs=33.2

Q ss_pred             CCCCCEEEEEcCChHHHHHHHHHHHcCCeEEEEeCCc
Q 018067          181 DKPGMHVGVVGLGGLGHVAVKFAKAMGVKVTVISTSP  217 (361)
Q Consensus       181 ~~~g~~vlV~Gag~vG~~a~~la~~~g~~vi~~~~~~  217 (361)
                      ++..++|+|+|+|.+|.=++..++.+|.+|.++.+.+
T Consensus        19 l~~p~~v~IiGgG~iG~E~A~~l~~~g~~Vtlv~~~~   55 (117)
T d1onfa2          19 IKESKKIGIVGSGYIAVELINVIKRLGIDSYIFARGN   55 (117)
T ss_dssp             CCCCSEEEEECCSHHHHHHHHHHHTTTCEEEEECSSS
T ss_pred             cCCCCEEEEECCchHHHHHHHHHHhccccceeeehhc
Confidence            4557899999999999999999999999999998764

>d1u8fo1 c.2.1.3 (O:3-151,O:316-335) Glyceraldehyde-3-phosphate dehydrogenase (GAPDH) {Human(Homo sapiens), liver isoform [TaxId: 9606]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Glyceraldehyde-3-phosphate dehydrogenase-like, N-terminal domain
domain: Glyceraldehyde-3-phosphate dehydrogenase (GAPDH)
species: Human(Homo sapiens), liver isoform [TaxId: 9606]

Probab=94.61  E-value=0.099  Score=40.17  Aligned_cols=97  Identities=18%  Similarity=0.282  Sum_probs=62.9

Q ss_pred             EEEEEcCChHHHHHHHHHHHc-CCeEEEEeCCc---hhHHHHHHH---cC---CC---------------EEecCCCHHH
Q 018067          186 HVGVVGLGGLGHVAVKFAKAM-GVKVTVISTSP---SKKSEAIER---LG---AD---------------SFLVSRDQDE  240 (361)
Q Consensus       186 ~vlV~Gag~vG~~a~~la~~~-g~~vi~~~~~~---~~~~~~~~~---~g---~~---------------~vv~~~~~~~  240 (361)
                      +|.|.|-|-+|.++...+-.. ..+++.+.+..   +....+.+.   .|   .+               .+++.++++.
T Consensus         3 kIgINGFGRIGR~v~R~~~~~~~~~ivaINd~~~~~~~~ayLlkyDS~hG~~~~~v~~~~~~l~i~~~~I~~~~~~~p~~   82 (169)
T d1u8fo1           3 KVGVNGFGRIGRLVTRAAFNSGKVDIVAINDPFIDLNYMVYMFQYDSTHGKFHGTVKAENGKLVINGNPITIFQERDPSK   82 (169)
T ss_dssp             EEEEECCSHHHHHHHHHHHHHCSSEEEEEECSSSCHHHHHHHHHCCTTTCSCSSCEEEETTEEEETTEEEEEECCSSGGG
T ss_pred             EEEEECCcHHHHHHHHHHHHCCCcEEEEecCCCccHHHHHHHHhhccccCCcCCeEEEECCEEEECCEEEEEEECCChhh
Confidence            588999999999999877655 46888776632   333444330   01   00               0111222333


Q ss_pred             HHHhcCCccEEEEcCCCcccHHHHHhccccCCEEEEecCCCC
Q 018067          241 MQAAMGTMDGIIDTVSAVHPLMPLIGLLKSQGKLVLVGAPEK  282 (361)
Q Consensus       241 ~~~~~~g~d~vid~~g~~~~~~~~~~~l~~~G~~v~~g~~~~  282 (361)
                      +.+..-++|+|+||+|.-.....+...+..+-+-+.+..+..
T Consensus        83 i~W~~~~vDiViEcTG~f~~~~~~~~hl~~gakkViiSaP~~  124 (169)
T d1u8fo1          83 IKWGDAGAEYVVESTGVFTTMEKAGAHLQGGAKRVIISAPSA  124 (169)
T ss_dssp             CCTTTTTCCEEEECSSSCCSHHHHGGGGGGTCSEEEESSCCS
T ss_pred             CCccccCCCEEEEecceeccHHHHHHHHhcCCceEeeccccc
Confidence            333334899999999997778888888988877777766543

>d1wdka3 c.2.1.6 (A:311-496) Fatty oxidation complex alpha subunit, middle domain {Pseudomonas fragi [TaxId: 296]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: 6-phosphogluconate dehydrogenase-like, N-terminal domain
domain: Fatty oxidation complex alpha subunit, middle domain
species: Pseudomonas fragi [TaxId: 296]

Probab=94.59  E-value=0.56  Score=36.32  Aligned_cols=40  Identities=13%  Similarity=0.136  Sum_probs=34.3

Q ss_pred             CCEEEEEcCChHHHHHHHHHHHcCCeEEEEeCCchhHHHH
Q 018067          184 GMHVGVVGLGGLGHVAVKFAKAMGVKVTVISTSPSKKSEA  223 (361)
Q Consensus       184 g~~vlV~Gag~vG~~a~~la~~~g~~vi~~~~~~~~~~~~  223 (361)
                      =++|.|+|+|.+|...++++...|.+|++.+.+++..+..
T Consensus         4 I~~vaViGaG~mG~~iA~~~a~~G~~V~l~D~~~~~l~~~   43 (186)
T d1wdka3           4 VKQAAVLGAGIMGGGIAYQSASKGTPILMKDINEHGIEQG   43 (186)
T ss_dssp             CSSEEEECCHHHHHHHHHHHHHTTCCEEEECSSHHHHHHH
T ss_pred             CCEEEEECcCHHHHHHHHHHHhCCCeEEEEECCHHHHhhh
Confidence            3569999999999999999999999999999988765443

>d1bgva1 c.2.1.7 (A:195-449) Glutamate dehydrogenase {Clostridium symbiosum [TaxId: 1512]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Aminoacid dehydrogenase-like, C-terminal domain
domain: Glutamate dehydrogenase
species: Clostridium symbiosum [TaxId: 1512]

Probab=94.43  E-value=0.17  Score=41.71  Aligned_cols=44  Identities=20%  Similarity=0.281  Sum_probs=35.8

Q ss_pred             hHhhhcCCCCCCCEEEEEcCChHHHHHHHHHHHcCCeEEEEeCC
Q 018067          173 SPLRFYGLDKPGMHVGVVGLGGLGHVAVKFAKAMGVKVTVISTS  216 (361)
Q Consensus       173 ~~l~~~~~~~~g~~vlV~Gag~vG~~a~~la~~~g~~vi~~~~~  216 (361)
                      .+++....--.|.+|+|.|.|.+|..+++.+...|++|+.+.++
T Consensus        25 ~~~~~~~~~l~g~~v~IQGfGnVG~~~a~~L~e~GakvvavsD~   68 (255)
T d1bgva1          25 AVMKHENDTLVGKTVALAGFGNVAWGAAKKLAELGAKAVTLSGP   68 (255)
T ss_dssp             HHHHHTTCCSTTCEEEECCSSHHHHHHHHHHHHHTCEEEEEEET
T ss_pred             HHHHhCCCCCCCCEEEEECCCHHHHHHHHHHHHcCCeEEEEecC
Confidence            33444443347899999999999999999999999999988753

>d1f0ya2 c.2.1.6 (A:12-203) Short chain L-3-hydroxyacyl CoA dehydrogenase {Human (Homo sapiens) [TaxId: 9606]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: 6-phosphogluconate dehydrogenase-like, N-terminal domain
domain: Short chain L-3-hydroxyacyl CoA dehydrogenase
species: Human (Homo sapiens) [TaxId: 9606]

Probab=94.42  E-value=0.038  Score=43.77  Aligned_cols=39  Identities=26%  Similarity=0.360  Sum_probs=34.2

Q ss_pred             CEEEEEcCChHHHHHHHHHHHcCCeEEEEeCCchhHHHH
Q 018067          185 MHVGVVGLGGLGHVAVKFAKAMGVKVTVISTSPSKKSEA  223 (361)
Q Consensus       185 ~~vlV~Gag~vG~~a~~la~~~g~~vi~~~~~~~~~~~~  223 (361)
                      ++|.|+|+|.+|...++++...|.+|++.+.+++.....
T Consensus         5 kkvaViGaG~mG~~iA~~~a~~G~~V~l~D~~~~~l~~a   43 (192)
T d1f0ya2           5 KHVTVIGGGLMGAGIAQVAAATGHTVVLVDQTEDILAKS   43 (192)
T ss_dssp             CEEEEECCSHHHHHHHHHHHHTTCEEEEECSCHHHHHHH
T ss_pred             EEEEEECcCHHHHHHHHHHHhCCCcEEEEECChHHHHHH
Confidence            579999999999999999999999999999998754433

>d1e7wa_ c.2.1.2 (A:) Dihydropteridin reductase (pteridine reductase) {Leishmania major [TaxId: 5664]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Tyrosine-dependent oxidoreductases
domain: Dihydropteridin reductase (pteridine reductase)
species: Leishmania major [TaxId: 5664]

Probab=94.42  E-value=0.09  Score=43.89  Aligned_cols=33  Identities=21%  Similarity=0.144  Sum_probs=27.5

Q ss_pred             EEEEcC-ChHHHHHHHHHHHcCCeEEEEeCCchh
Q 018067          187 VGVVGL-GGLGHVAVKFAKAMGVKVTVISTSPSK  219 (361)
Q Consensus       187 vlV~Ga-g~vG~~a~~la~~~g~~vi~~~~~~~~  219 (361)
                      +||.|+ +++|.++++.+...|++|++.++..++
T Consensus         5 AlITGas~GIG~aiA~~la~~Ga~V~i~~~~~~~   38 (284)
T d1e7wa_           5 ALVTGAAKRLGRSIAEGLHAEGYAVCLHYHRSAA   38 (284)
T ss_dssp             EEETTCSSHHHHHHHHHHHHTTCEEEEEESSCHH
T ss_pred             EEEeCCCCHHHHHHHHHHHHcCCEEEEEeCCCHH
Confidence            466787 899999999999999999988766543

>d3etja2 c.30.1.1 (A:1-78) N5-carboxyaminoimidazole ribonucleotide synthetase PurK (AIRC), N-domain {Escherichia coli [TaxId: 562]}

class: Alpha and beta proteins (a/b)
fold: PreATP-grasp domain
superfamily: PreATP-grasp domain
family: BC N-terminal domain-like
domain: N5-carboxyaminoimidazole ribonucleotide synthetase PurK (AIRC), N-domain
species: Escherichia coli [TaxId: 562]

Probab=94.39  E-value=0.018  Score=38.22  Aligned_cols=35  Identities=23%  Similarity=0.375  Sum_probs=31.3

Q ss_pred             CEEEEEcCChHHHHHHHHHHHcCCeEEEEeCCchh
Q 018067          185 MHVGVVGLGGLGHVAVKFAKAMGVKVTVISTSPSK  219 (361)
Q Consensus       185 ~~vlV~Gag~vG~~a~~la~~~g~~vi~~~~~~~~  219 (361)
                      ++|.|+|+|.+|.+.++-++.+|.++++.+..++.
T Consensus         2 k~vgIlG~GQLgrMl~~Aa~~LG~~v~vldp~~~~   36 (78)
T d3etja2           2 KQVCVLGNGQLGRMLRQAGEPLGIAVWPVGLDAEP   36 (78)
T ss_dssp             EEEEEEBCSHHHHHHHHHHGGGTEEEEEECTTSCG
T ss_pred             CEEEEEcCCHHHHHHHHHHHHcCCEEEEEcCCCCC
Confidence            47899999999999999999999999999876543

>d1x7da_ c.2.1.13 (A:) Ornithine cyclodeaminase {Pseudomonas putida [TaxId: 303]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Ornithine cyclodeaminase-like
domain: Ornithine cyclodeaminase
species: Pseudomonas putida [TaxId: 303]

Probab=94.39  E-value=0.07  Score=46.08  Aligned_cols=110  Identities=15%  Similarity=0.158  Sum_probs=73.8

Q ss_pred             hhcCCCCCCCEEEEEcCChHHHHHHHHHH-HcCC-eEEEEeCCchhHHHHHHHcCCC---EEecCCCHHHHHHhcCCccE
Q 018067          176 RFYGLDKPGMHVGVVGLGGLGHVAVKFAK-AMGV-KVTVISTSPSKKSEAIERLGAD---SFLVSRDQDEMQAAMGTMDG  250 (361)
Q Consensus       176 ~~~~~~~~g~~vlV~Gag~vG~~a~~la~-~~g~-~vi~~~~~~~~~~~~~~~~g~~---~vv~~~~~~~~~~~~~g~d~  250 (361)
                      +..++ +..+++.|+|+|..+.+.++.+. .++. +|.+.+++.++.+.+++++...   .+...   +.+++...+.|+
T Consensus       121 ~~LA~-~da~~l~iiG~G~QA~~~~~a~~~v~~i~~V~v~~r~~~~~~~~~~~l~~~~g~~v~~~---~s~~eav~~ADI  196 (340)
T d1x7da_         121 QALAR-PNARKMALIGNGAQSEFQALAFHKHLGIEEIVAYDTDPLATAKLIANLKEYSGLTIRRA---SSVAEAVKGVDI  196 (340)
T ss_dssp             HHHSC-TTCCEEEEECCSTTHHHHHHHHHHHSCCCEEEEECSSHHHHHHHHHHHTTCTTCEEEEC---SSHHHHHTTCSE
T ss_pred             HHhhc-cCCceEEEEcccHHHHHHHHHHhhhcceeeeEEEecChHHHHHHHHhhhhccCCCceec---CCHHHHHhcCCc
Confidence            44443 56788999999999988887665 4676 8889999988887787766431   22222   234456678999


Q ss_pred             EEEcCCCcc-cHHHHHhccccCCEEEEecCCCC-CcccChH
Q 018067          251 IIDTVSAVH-PLMPLIGLLKSQGKLVLVGAPEK-PLELPAF  289 (361)
Q Consensus       251 vid~~g~~~-~~~~~~~~l~~~G~~v~~g~~~~-~~~~~~~  289 (361)
                      |+-|+.+.. ..-.-.+.++++-.+..+|.... .-+++..
T Consensus       197 i~t~Tas~s~~Pv~~~~~l~pG~hI~aiGs~~p~~~Eld~~  237 (340)
T d1x7da_         197 ITTVTADKAYATIITPDMLEPGMHLNAVGGDCPGKTELHAD  237 (340)
T ss_dssp             EEECCCCSSEEEEECGGGCCTTCEEEECSCCBTTBEEECHH
T ss_pred             eeeccccCCCCcccchhhcCCCCEEeecccchhhhhccCHH
Confidence            998775432 01122467899999999997643 3455554

>d1uh5a_ c.2.1.2 (A:) Enoyl-ACP reductase {Malaria parasite (Plasmodium falciparum) [TaxId: 5833]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Tyrosine-dependent oxidoreductases
domain: Enoyl-ACP reductase
species: Malaria parasite (Plasmodium falciparum) [TaxId: 5833]

Probab=94.38  E-value=0.1  Score=44.78  Aligned_cols=37  Identities=22%  Similarity=0.164  Sum_probs=30.2

Q ss_pred             CCEEEEEcCC---hHHHHHHHHHHHcCCeEEEEeCCchhH
Q 018067          184 GMHVGVVGLG---GLGHVAVKFAKAMGVKVTVISTSPSKK  220 (361)
Q Consensus       184 g~~vlV~Gag---~vG~~a~~la~~~g~~vi~~~~~~~~~  220 (361)
                      ++.+||.|+|   ++|.++++.+-..|++|++..+.....
T Consensus         2 ~kVAlITGaa~s~GIG~aiA~~la~~GA~V~i~~~~~~~~   41 (329)
T d1uh5a_           2 EDICFIAGIGDTNGYGWGIAKELSKRNVKIIFGIWPPVYN   41 (329)
T ss_dssp             CCEEEEECCSSSSSHHHHHHHHHHHTTCEEEEEECGGGHH
T ss_pred             CcEEEEeCCCCCChHHHHHHHHHHHcCCEEEEEeCchhhh
Confidence            5667888953   899999999999999999987766543

>d1qyda_ c.2.1.2 (A:) Pinoresinol-lariciresinol reductase {Giant arborvitae (Thuja plicata) [TaxId: 3316]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Tyrosine-dependent oxidoreductases
domain: Pinoresinol-lariciresinol reductase
species: Giant arborvitae (Thuja plicata) [TaxId: 3316]

Probab=94.38  E-value=0.075  Score=44.59  Aligned_cols=73  Identities=21%  Similarity=0.265  Sum_probs=51.7

Q ss_pred             CEEEEEcC-ChHHHHHHHHHHHcCCeEEEEeCCchh-----HHHH--HHHcCCCEE-ecCCCHHHHHHhcCCccEEEEcC
Q 018067          185 MHVGVVGL-GGLGHVAVKFAKAMGVKVTVISTSPSK-----KSEA--IERLGADSF-LVSRDQDEMQAAMGTMDGIIDTV  255 (361)
Q Consensus       185 ~~vlV~Ga-g~vG~~a~~la~~~g~~vi~~~~~~~~-----~~~~--~~~~g~~~v-v~~~~~~~~~~~~~g~d~vid~~  255 (361)
                      ++|||+|+ |-+|...+..+...|.+|++++|+...     ...+  .+..+++.+ .|..+.+.+.....+.+.++.++
T Consensus         4 ~KILVtGatG~iG~~l~~~L~~~G~~V~~~~R~~~~~~~~~~~~~~~~~~~~v~~v~~d~~d~~~~~~~~~~~~~~~~~~   83 (312)
T d1qyda_           4 SRVLIVGGTGYIGKRIVNASISLGHPTYVLFRPEVVSNIDKVQMLLYFKQLGAKLIEASLDDHQRLVDALKQVDVVISAL   83 (312)
T ss_dssp             CCEEEESTTSTTHHHHHHHHHHTTCCEEEECCSCCSSCHHHHHHHHHHHTTTCEEECCCSSCHHHHHHHHTTCSEEEECC
T ss_pred             CEEEEECCCCHHHHHHHHHHHhCCCEEEEEECCCcccchhHHHHHhhhccCCcEEEEeecccchhhhhhccCcchhhhhh
Confidence            55999998 999999999998999999999886421     1111  123344432 24566777777778888998877


Q ss_pred             CC
Q 018067          256 SA  257 (361)
Q Consensus       256 g~  257 (361)
                      +.
T Consensus        84 ~~   85 (312)
T d1qyda_          84 AG   85 (312)
T ss_dssp             CC
T ss_pred             hh
Confidence            64

>d1p91a_ c.66.1.33 (A:) rRNA methyltransferase RlmA {Escherichia coli [TaxId: 562]}

class: Alpha and beta proteins (a/b)
fold: S-adenosyl-L-methionine-dependent methyltransferases
superfamily: S-adenosyl-L-methionine-dependent methyltransferases
family: rRNA methyltransferase RlmA
domain: rRNA methyltransferase RlmA
species: Escherichia coli [TaxId: 562]

Probab=94.37  E-value=0.024  Score=47.51  Aligned_cols=94  Identities=20%  Similarity=0.236  Sum_probs=63.2

Q ss_pred             CCCCEEEEEcCChHHHHHHHHHHHc-CCeEEEEeCCchhHHHHHHHcCCCEEecCCCHHHHHHhcCCccEEEEcCCCccc
Q 018067          182 KPGMHVGVVGLGGLGHVAVKFAKAM-GVKVTVISTSPSKKSEAIERLGADSFLVSRDQDEMQAAMGTMDGIIDTVSAVHP  260 (361)
Q Consensus       182 ~~g~~vlV~Gag~vG~~a~~la~~~-g~~vi~~~~~~~~~~~~~~~~g~~~vv~~~~~~~~~~~~~g~d~vid~~g~~~~  260 (361)
                      .++.+||=+|+|. |..+..+++.. +.+++.++.+++....+.+...-...+..+. ..+.-..+.+|+|+..-.-.. 
T Consensus        83 ~~~~~iLDiGcG~-G~~~~~l~~~~~~~~~~giD~s~~~~~~a~~~~~~~~~~~~d~-~~l~~~~~sfD~v~~~~~~~~-  159 (268)
T d1p91a_          83 DKATAVLDIGCGE-GYYTHAFADALPEITTFGLDVSKVAIKAAAKRYPQVTFCVASS-HRLPFSDTSMDAIIRIYAPCK-  159 (268)
T ss_dssp             TTCCEEEEETCTT-STTHHHHHHTCTTSEEEEEESCHHHHHHHHHHCTTSEEEECCT-TSCSBCTTCEEEEEEESCCCC-
T ss_pred             CCCCEEEEeCCCC-cHHHHHHHHHCCCCEEEEecchHhhhhhhhcccccccceeeeh-hhccCCCCCEEEEeecCCHHH-
Confidence            5778888899865 67777777775 6799999999887766654443222222111 111111236999987655444 


Q ss_pred             HHHHHhccccCCEEEEec
Q 018067          261 LMPLIGLLKSQGKLVLVG  278 (361)
Q Consensus       261 ~~~~~~~l~~~G~~v~~g  278 (361)
                      +..+.+.|+|+|.++...
T Consensus       160 ~~e~~rvLkpgG~l~~~~  177 (268)
T d1p91a_         160 AEELARVVKPGGWVITAT  177 (268)
T ss_dssp             HHHHHHHEEEEEEEEEEE
T ss_pred             HHHHHHHhCCCcEEEEEe
Confidence            889999999999999874

>d1vl0a_ c.2.1.2 (A:) DTDP-4-dehydrorhamnose reductase RfbD {Clostridium acetobutylicum [TaxId: 1488]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Tyrosine-dependent oxidoreductases
domain: DTDP-4-dehydrorhamnose reductase RfbD
species: Clostridium acetobutylicum [TaxId: 1488]

Probab=94.33  E-value=0.046  Score=45.41  Aligned_cols=58  Identities=17%  Similarity=0.178  Sum_probs=43.1

Q ss_pred             EEEEEcC-ChHHHHHHHHHHHcCCeEEEEeCCchhHHHHHHHcCCCEEecCCCHHHHHHhcC--CccEEEEcCCCc
Q 018067          186 HVGVVGL-GGLGHVAVKFAKAMGVKVTVISTSPSKKSEAIERLGADSFLVSRDQDEMQAAMG--TMDGIIDTVSAV  258 (361)
Q Consensus       186 ~vlV~Ga-g~vG~~a~~la~~~g~~vi~~~~~~~~~~~~~~~~g~~~vv~~~~~~~~~~~~~--g~d~vid~~g~~  258 (361)
                      +|||+|+ |-+|...+..++..|.+|+.+++.+               +|..+.+.+.++..  .+|+||++++..
T Consensus         3 KIlItGasGfiG~~l~~~L~~~g~~Vi~~~r~~---------------~D~~d~~~~~~~l~~~~~d~vih~a~~~   63 (281)
T d1vl0a_           3 KILITGANGQLGREIQKQLKGKNVEVIPTDVQD---------------LDITNVLAVNKFFNEKKPNVVINCAAHT   63 (281)
T ss_dssp             EEEEESTTSHHHHHHHHHHTTSSEEEEEECTTT---------------CCTTCHHHHHHHHHHHCCSEEEECCCCC
T ss_pred             EEEEECCCCHHHHHHHHHHHhCCCEEEEeechh---------------ccCCCHHHHHHHHHHcCCCEEEeecccc
Confidence            5899998 9999999999999999999887653               13344444444332  678899888754

>d1udca_ c.2.1.2 (A:) Uridine diphosphogalactose-4-epimerase (UDP-galactose 4-epimerase) {Escherichia coli [TaxId: 562]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Tyrosine-dependent oxidoreductases
domain: Uridine diphosphogalactose-4-epimerase (UDP-galactose 4-epimerase)
species: Escherichia coli [TaxId: 562]

Probab=94.30  E-value=0.082  Score=45.45  Aligned_cols=72  Identities=21%  Similarity=0.150  Sum_probs=48.2

Q ss_pred             EEEEEcC-ChHHHHHHHHHHHcCCeEEEEeCCc---hhHHHHHHHc---CCCE-EecCCCHHHHHHhc--CCccEEEEcC
Q 018067          186 HVGVVGL-GGLGHVAVKFAKAMGVKVTVISTSP---SKKSEAIERL---GADS-FLVSRDQDEMQAAM--GTMDGIIDTV  255 (361)
Q Consensus       186 ~vlV~Ga-g~vG~~a~~la~~~g~~vi~~~~~~---~~~~~~~~~~---g~~~-vv~~~~~~~~~~~~--~g~d~vid~~  255 (361)
                      +|||+|+ |-+|...+..+...|.+|+++++..   .......+.+   +... ..|-.+.+.+.++.  .++|+||+++
T Consensus         2 KiLItG~tGfIG~~l~~~L~~~g~~V~~~d~~~~~~~~~~~~~~~~~~~~~~~~~~Dl~d~~~l~~~~~~~~~d~ViHlA   81 (338)
T d1udca_           2 RVLVTGGSGYIGSHTCVQLLQNGHDVIILDNLCNSKRSVLPVIERLGGKHPTFVEGDIRNEALMTEILHDHAIDTVIHFA   81 (338)
T ss_dssp             EEEEETTTSHHHHHHHHHHHHTTCEEEEEECCSSCCTTHHHHHHHHHTSCCEEEECCTTCHHHHHHHHHHTTCSEEEECC
T ss_pred             EEEEECCCCHHHHHHHHHHHHCcCEEEEEECCCCcchhhHHHHHhhcCCCCEEEEeecCCHHHHHHHHhccCCCEEEECC
Confidence            5999998 9999999999999999999987522   1111111222   2322 13455666666553  3899999988


Q ss_pred             CC
Q 018067          256 SA  257 (361)
Q Consensus       256 g~  257 (361)
                      +.
T Consensus        82 a~   83 (338)
T d1udca_          82 GL   83 (338)
T ss_dssp             SC
T ss_pred             Cc
Confidence            64

>d2b4ro1 c.2.1.3 (O:4-152,O:319-335) Glyceraldehyde-3-phosphate dehydrogenase (GAPDH) {Malaria parasite (Plasmodium falciparum) [TaxId: 5833]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Glyceraldehyde-3-phosphate dehydrogenase-like, N-terminal domain
domain: Glyceraldehyde-3-phosphate dehydrogenase (GAPDH)
species: Malaria parasite (Plasmodium falciparum) [TaxId: 5833]

Probab=94.29  E-value=0.056  Score=41.57  Aligned_cols=95  Identities=18%  Similarity=0.303  Sum_probs=62.3

Q ss_pred             EEEEEcCChHHHHHHHHHHHc-CCeEEEEeCCc---hhHHHHHHHc----C---CC---------------EEecCCCHH
Q 018067          186 HVGVVGLGGLGHVAVKFAKAM-GVKVTVISTSP---SKKSEAIERL----G---AD---------------SFLVSRDQD  239 (361)
Q Consensus       186 ~vlV~Gag~vG~~a~~la~~~-g~~vi~~~~~~---~~~~~~~~~~----g---~~---------------~vv~~~~~~  239 (361)
                      +|.|.|-|-+|.++...+... ..+++.+-+..   +....+.+ +    |   ..               .++..+++.
T Consensus         2 kigINGfGRIGR~v~R~~~~~~~~~iv~INd~~~d~~~~ayLlk-yDS~hG~~~~~v~~~~~~l~i~~~~I~i~~~~~p~   80 (166)
T d2b4ro1           2 KLGINGFGRIGRLVFRAAFGRKDIEVVAINDPFMDLNHLCYLLK-YDSVHGQFPCEVTHADGFLLIGEKKVSVFAEKDPS   80 (166)
T ss_dssp             EEEEECCSHHHHHHHHHHHTCSSEEEEEEECTTCCHHHHHHHHH-CCTTTCSCSSCEEEETTEEEESSCEEEEECCSSGG
T ss_pred             eEEEECCCHHHHHHHHHHhhCCCcEEEEECCCCCChHHhhhhhh-cccccccceeeeccCCceEEecCcEEEEEeCCChH
Confidence            588999999999999988765 56887776532   23334432 1    1   10               111222333


Q ss_pred             HHHHhcCCccEEEEcCCCcccHHHHHhccccCCEEEEecCCC
Q 018067          240 EMQAAMGTMDGIIDTVSAVHPLMPLIGLLKSQGKLVLVGAPE  281 (361)
Q Consensus       240 ~~~~~~~g~d~vid~~g~~~~~~~~~~~l~~~G~~v~~g~~~  281 (361)
                      .+.+...++|+|+||+|.-...+.+...+..+.+-|.+..+.
T Consensus        81 ~i~W~~~gvdiViEcTG~f~~~~~~~~hl~~gakkViiSAP~  122 (166)
T d2b4ro1          81 QIPWGKCQVDVVCESTGVFLTKELASSHLKGGAKKVIMSAPP  122 (166)
T ss_dssp             GCCHHHHTCSEEEECSSSCCSHHHHTHHHHTTCSEEEESSCC
T ss_pred             HccccccCCCEEEEecccccchhhhhhhhccCCCEEEEeccc
Confidence            333333489999999999877888888998887666666554

>d1d7ya2 c.3.1.5 (A:116-236) NADH-dependent ferredoxin reductase, BphA4 {Pseudomonas sp., KKS102 [TaxId: 306]}

class: Alpha and beta proteins (a/b)
fold: FAD/NAD(P)-binding domain
superfamily: FAD/NAD(P)-binding domain
family: FAD/NAD-linked reductases, N-terminal and central domains
domain: NADH-dependent ferredoxin reductase, BphA4
species: Pseudomonas sp., KKS102 [TaxId: 306]

Probab=94.24  E-value=0.044  Score=39.76  Aligned_cols=37  Identities=30%  Similarity=0.467  Sum_probs=33.8

Q ss_pred             CCCCCEEEEEcCChHHHHHHHHHHHcCCeEEEEeCCc
Q 018067          181 DKPGMHVGVVGLGGLGHVAVKFAKAMGVKVTVISTSP  217 (361)
Q Consensus       181 ~~~g~~vlV~Gag~vG~~a~~la~~~g~~vi~~~~~~  217 (361)
                      ++++++++|+|+|.+|.=++..++.+|.+|.++.+.+
T Consensus        27 ~~~~~~vvIIGgG~iG~E~A~~l~~~g~~Vtli~~~~   63 (121)
T d1d7ya2          27 LRPQSRLLIVGGGVIGLELAATARTAGVHVSLVETQP   63 (121)
T ss_dssp             CCTTCEEEEECCSHHHHHHHHHHHHTTCEEEEEESSS
T ss_pred             hhcCCeEEEECcchhHHHHHHHhhcccceEEEEeecc
Confidence            4678999999999999999999999999999998875

>d1jaya_ c.2.1.6 (A:) Coenzyme F420H2:NADP+ oxidoreductase (FNO) {Archaeon Archaeoglobus fulgidus [TaxId: 2234]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: 6-phosphogluconate dehydrogenase-like, N-terminal domain
domain: Coenzyme F420H2:NADP+ oxidoreductase (FNO)
species: Archaeon Archaeoglobus fulgidus [TaxId: 2234]

Probab=94.24  E-value=0.036  Score=43.33  Aligned_cols=43  Identities=21%  Similarity=0.267  Sum_probs=37.1

Q ss_pred             EEEEE-cCChHHHHHHHHHHHcCCeEEEEeCCchhHHHHHHHcC
Q 018067          186 HVGVV-GLGGLGHVAVKFAKAMGVKVTVISTSPSKKSEAIERLG  228 (361)
Q Consensus       186 ~vlV~-Gag~vG~~a~~la~~~g~~vi~~~~~~~~~~~~~~~~g  228 (361)
                      +|.|+ |+|.+|.+.++.+...|++|++..|++++.+.+.++++
T Consensus         2 ki~vigGaG~iG~alA~~la~~G~~V~l~~R~~e~~~~l~~~i~   45 (212)
T d1jaya_           2 RVALLGGTGNLGKGLALRLATLGHEIVVGSRREEKAEAKAAEYR   45 (212)
T ss_dssp             EEEEETTTSHHHHHHHHHHHTTTCEEEEEESSHHHHHHHHHHHH
T ss_pred             EEEEEeCCcHHHHHHHHHHHHCCCEEEEEECCHHHHHHHHHHHH
Confidence            57888 56999999999999999999999999988777766554

>d1nhpa2 c.3.1.5 (A:120-242) NADH peroxidase {Enterococcus faecalis [TaxId: 1351]}

class: Alpha and beta proteins (a/b)
fold: FAD/NAD(P)-binding domain
superfamily: FAD/NAD(P)-binding domain
family: FAD/NAD-linked reductases, N-terminal and central domains
domain: NADH peroxidase
species: Enterococcus faecalis [TaxId: 1351]

Probab=94.22  E-value=0.048  Score=39.64  Aligned_cols=36  Identities=33%  Similarity=0.277  Sum_probs=32.7

Q ss_pred             CCCCEEEEEcCChHHHHHHHHHHHcCCeEEEEeCCc
Q 018067          182 KPGMHVGVVGLGGLGHVAVKFAKAMGVKVTVISTSP  217 (361)
Q Consensus       182 ~~g~~vlV~Gag~vG~~a~~la~~~g~~vi~~~~~~  217 (361)
                      .++++|+|+|+|.+|+-+++.+..+|.+|.++.+.+
T Consensus        28 ~~~k~vvViGgG~iG~E~A~~l~~~g~~Vtlie~~~   63 (123)
T d1nhpa2          28 PEVNNVVVIGSGYIGIEAAEAFAKAGKKVTVIDILD   63 (123)
T ss_dssp             TTCCEEEEECCSHHHHHHHHHHHHTTCEEEEEESSS
T ss_pred             cCCCEEEEECChHHHHHHHHHhhccceEEEEEEecC
Confidence            567899999999999999999999999999987764

>d1pgja2 c.2.1.6 (A:1-178) 6-phosphogluconate dehydrogenase {Trypanosoma brucei [TaxId: 5691]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: 6-phosphogluconate dehydrogenase-like, N-terminal domain
domain: 6-phosphogluconate dehydrogenase
species: Trypanosoma brucei [TaxId: 5691]

Probab=94.19  E-value=0.34  Score=37.17  Aligned_cols=95  Identities=23%  Similarity=0.248  Sum_probs=64.5

Q ss_pred             EEEEEcCChHHHHHHHHHHHcCCeEEEEeCCchhHHHHHHHcCCC----EEecCCCHHHHHHhcCCccEEEEcCCCccc-
Q 018067          186 HVGVVGLGGLGHVAVKFAKAMGVKVTVISTSPSKKSEAIERLGAD----SFLVSRDQDEMQAAMGTMDGIIDTVSAVHP-  260 (361)
Q Consensus       186 ~vlV~Gag~vG~~a~~la~~~g~~vi~~~~~~~~~~~~~~~~g~~----~vv~~~~~~~~~~~~~g~d~vid~~g~~~~-  260 (361)
                      +|-|+|.|.+|...+.-+...|.+|++.+++.++.+.+.++.+..    ........+.+.......+.++.++..... 
T Consensus         3 kIGvIGlG~MG~~ma~~L~~~G~~V~~~dr~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~   82 (178)
T d1pgja2           3 DVGVVGLGVMGANLALNIAEKGFKVAVFNRTYSKSEEFMKANASAPFAGNLKAFETMEAFAASLKKPRKALILVQAGAAT   82 (178)
T ss_dssp             SEEEECCSHHHHHHHHHHHHTTCCEEEECSSHHHHHHHHHHTTTSTTGGGEEECSCHHHHHHHBCSSCEEEECCCCSHHH
T ss_pred             EEEEEeehHHHHHHHHHHHHCCCeEEEEECCHHHHHHHHHcCCccccccchhhhhhhhHHHHhcccceEEEEeecCcchh
Confidence            477899999999999999999999999999999988887665421    111223333344444566667666665432 


Q ss_pred             ---HHHHHhccccCCEEEEecCC
Q 018067          261 ---LMPLIGLLKSQGKLVLVGAP  280 (361)
Q Consensus       261 ---~~~~~~~l~~~G~~v~~g~~  280 (361)
                         +......+.++..++..+..
T Consensus        83 ~~~~~~~~~~~~~~~iii~~st~  105 (178)
T d1pgja2          83 DSTIEQLKKVFEKGDILVDTGNA  105 (178)
T ss_dssp             HHHHHHHHHHCCTTCEEEECCCC
T ss_pred             hhhhhhhhhhccccceecccCcc
Confidence               24555566777777776653

>d1u2za_ c.66.1.31 (A:) Catalytic, N-terminal domain of histone methyltransferase Dot1l {Baker's yeast (Saccharomyces cerevisiae) [TaxId: 4932]}

class: Alpha and beta proteins (a/b)
fold: S-adenosyl-L-methionine-dependent methyltransferases
superfamily: S-adenosyl-L-methionine-dependent methyltransferases
family: Catalytic, N-terminal domain of histone methyltransferase Dot1l
domain: Catalytic, N-terminal domain of histone methyltransferase Dot1l
species: Baker's yeast (Saccharomyces cerevisiae) [TaxId: 4932]

Probab=94.15  E-value=0.11  Score=46.03  Aligned_cols=106  Identities=16%  Similarity=0.121  Sum_probs=66.5

Q ss_pred             hhhHhhhcCCCCCCCEEEEEcCChHHHHHHHHHHHcCC-eEEEEeCCchhHHHHH---HH-------cCC----CEEecC
Q 018067          171 VYSPLRFYGLDKPGMHVGVVGLGGLGHVAVKFAKAMGV-KVTVISTSPSKKSEAI---ER-------LGA----DSFLVS  235 (361)
Q Consensus       171 a~~~l~~~~~~~~g~~vlV~Gag~vG~~a~~la~~~g~-~vi~~~~~~~~~~~~~---~~-------~g~----~~vv~~  235 (361)
                      ...++.+.. +++|+++|=+|+|. |..+.++|+..|+ +++.++-++...+.+.   ++       +|.    ......
T Consensus       205 i~~Il~~l~-Lkpgd~fLDLGCG~-G~~vl~aA~~~g~~~v~GIDiS~~~i~~Ak~~~~e~~~~~~~~g~~~~~~~~~~~  282 (406)
T d1u2za_         205 LSDVYQQCQ-LKKGDTFMDLGSGV-GNCVVQAALECGCALSFGCEIMDDASDLTILQYEELKKRCKLYGMRLNNVEFSLK  282 (406)
T ss_dssp             HHHHHHHTT-CCTTCEEEEESCTT-SHHHHHHHHHHCCSEEEEEECCHHHHHHHHHHHHHHHHHHHHTTBCCCCEEEEES
T ss_pred             HHHHHHHhC-CCCCCEEEeCCCCC-cHHHHHHHHHcCCCeEEEEeCCHHHHHHHHHHHHHHhhhhhhhccccccceeeee
Confidence            345566554 89999877789874 8999999999987 8999998875433221   11       121    111111


Q ss_pred             ---CCHHHHHHhcCCccEEEEc-CC-C---cccHHHHHhccccCCEEEEec
Q 018067          236 ---RDQDEMQAAMGTMDGIIDT-VS-A---VHPLMPLIGLLKSQGKLVLVG  278 (361)
Q Consensus       236 ---~~~~~~~~~~~g~d~vid~-~g-~---~~~~~~~~~~l~~~G~~v~~g  278 (361)
                         .+.+........+|+++-. .- .   ...+...++.|++||+++..-
T Consensus       283 ~~f~~~~~~d~~~~~adVV~inn~~f~~~l~~~L~ei~r~LKPGGrIVs~~  333 (406)
T d1u2za_         283 KSFVDNNRVAELIPQCDVILVNNFLFDEDLNKKVEKILQTAKVGCKIISLK  333 (406)
T ss_dssp             SCSTTCHHHHHHGGGCSEEEECCTTCCHHHHHHHHHHHTTCCTTCEEEESS
T ss_pred             echhhccccccccccceEEEEecccCchHHHHHHHHHHHhcCCCcEEEEec
Confidence               1123334444568888642 21 1   223667888999999999864

>d1djqa3 c.4.1.1 (A:341-489,A:646-729) Trimethylamine dehydrogenase, middle domain {Methylophilus methylotrophus, w3a1 [TaxId: 17]}

class: Alpha and beta proteins (a/b)
fold: Nucleotide-binding domain
superfamily: Nucleotide-binding domain
family: N-terminal domain of adrenodoxin reductase-like
domain: Trimethylamine dehydrogenase, middle domain
species: Methylophilus methylotrophus, w3a1 [TaxId: 17]

Probab=94.12  E-value=0.033  Score=45.42  Aligned_cols=37  Identities=27%  Similarity=0.283  Sum_probs=33.4

Q ss_pred             CCCCEEEEEcCChHHHHHHHHHHHcCCeEEEEeCCch
Q 018067          182 KPGMHVGVVGLGGLGHVAVKFAKAMGVKVTVISTSPS  218 (361)
Q Consensus       182 ~~g~~vlV~Gag~vG~~a~~la~~~g~~vi~~~~~~~  218 (361)
                      +.+++|+|+|+|+.|+.++..++..|.+|+++...++
T Consensus        47 ~~~k~VvIIGaGpAGl~aA~~l~~~G~~v~l~E~~~~   83 (233)
T d1djqa3          47 KNKDSVLIVGAGPSGSEAARVLMESGYTVHLTDTAEK   83 (233)
T ss_dssp             SSCCEEEEECCSHHHHHHHHHHHHTTCEEEEECSSSS
T ss_pred             cCCceEEEEcccHHHHHHHHHHHHhccceeeEeeccc
Confidence            5788999999999999999999999999999987653

>d1i24a_ c.2.1.2 (A:) Sulfolipid biosynthesis protein SQD1 {Thale cress (Arabidopsis thaliana) [TaxId: 3702]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Tyrosine-dependent oxidoreductases
domain: Sulfolipid biosynthesis protein SQD1
species: Thale cress (Arabidopsis thaliana) [TaxId: 3702]

Probab=94.08  E-value=0.081  Score=46.49  Aligned_cols=31  Identities=23%  Similarity=0.293  Sum_probs=28.1

Q ss_pred             CCEEEEEcC-ChHHHHHHHHHHHcCCeEEEEe
Q 018067          184 GMHVGVVGL-GGLGHVAVKFAKAMGVKVTVIS  214 (361)
Q Consensus       184 g~~vlV~Ga-g~vG~~a~~la~~~g~~vi~~~  214 (361)
                      |.+|||.|+ |-+|...+..+...|.+|++++
T Consensus         1 g~kILVTGatGfiG~~lv~~Ll~~g~~V~~iD   32 (393)
T d1i24a_           1 GSRVMVIGGDGYCGWATALHLSKKNYEVCIVD   32 (393)
T ss_dssp             -CEEEEETTTSHHHHHHHHHHHHTTCEEEEEE
T ss_pred             CCEEEEECCCcHHHHHHHHHHHHCcCEEEEEe
Confidence            689999998 9999999999999999999986

>d1gesa2 c.3.1.5 (A:147-262) Glutathione reductase {Escherichia coli [TaxId: 562]}

class: Alpha and beta proteins (a/b)
fold: FAD/NAD(P)-binding domain
superfamily: FAD/NAD(P)-binding domain
family: FAD/NAD-linked reductases, N-terminal and central domains
domain: Glutathione reductase
species: Escherichia coli [TaxId: 562]

Probab=94.04  E-value=0.041  Score=39.57  Aligned_cols=35  Identities=23%  Similarity=0.242  Sum_probs=31.7

Q ss_pred             CCCEEEEEcCChHHHHHHHHHHHcCCeEEEEeCCc
Q 018067          183 PGMHVGVVGLGGLGHVAVKFAKAMGVKVTVISTSP  217 (361)
Q Consensus       183 ~g~~vlV~Gag~vG~~a~~la~~~g~~vi~~~~~~  217 (361)
                      -.++++|+|+|.+|+-+++.++.+|.+|.++.+.+
T Consensus        20 ~p~~vvIiGgG~ig~E~A~~l~~~G~~Vtlve~~~   54 (116)
T d1gesa2          20 LPERVAVVGAGYIGVELGGVINGLGAKTHLFEMFD   54 (116)
T ss_dssp             CCSEEEEECCSHHHHHHHHHHHHTTCEEEEECSSS
T ss_pred             CCCEEEEECCChhhHHHHHHhhccccEEEEEeecc
Confidence            45789999999999999999999999999998865

>d1pzga1 c.2.1.5 (A:14-163) Lactate dehydrogenase {Toxoplasma gondii [TaxId: 5811]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: LDH N-terminal domain-like
domain: Lactate dehydrogenase
species: Toxoplasma gondii [TaxId: 5811]

Probab=94.00  E-value=0.054  Score=41.16  Aligned_cols=75  Identities=15%  Similarity=0.141  Sum_probs=48.7

Q ss_pred             CCCCEEEEEcCChHHHHHHHHHHHcCC-eEEEEeCCchhHHHHHHHc-------CCCEEecCCCHHHHHHhcCCccEEEE
Q 018067          182 KPGMHVGVVGLGGLGHVAVKFAKAMGV-KVTVISTSPSKKSEAIERL-------GADSFLVSRDQDEMQAAMGTMDGIID  253 (361)
Q Consensus       182 ~~g~~vlV~Gag~vG~~a~~la~~~g~-~vi~~~~~~~~~~~~~~~~-------g~~~vv~~~~~~~~~~~~~g~d~vid  253 (361)
                      ++..+|.|+|+|.+|...+.++...+. ++++++..+++....+.++       +....+...  ....+...+.|+|+-
T Consensus         5 ~k~~KI~IIGaG~VG~~lA~~l~~~~~~el~L~D~~~~~~~g~a~Dl~~~~~~~~~~~~~~~~--~~~~~~~~~adiVvi   82 (154)
T d1pzga1           5 QRRKKVAMIGSGMIGGTMGYLCALRELADVVLYDVVKGMPEGKALDLSHVTSVVDTNVSVRAE--YSYEAALTGADCVIV   82 (154)
T ss_dssp             SCCCEEEEECCSHHHHHHHHHHHHHTCCEEEEECSSSSHHHHHHHHHHHHHHHTTCCCCEEEE--CSHHHHHTTCSEEEE
T ss_pred             cCCCcEEEECCCHHHHHHHHHHHhCCCceEEEEEeccccchhHHHHHhhhccccCCeeEEecc--CchhhhhcCCCeEEE
Confidence            566789999999999999988887775 8888887776544443333       211111111  112234468999999


Q ss_pred             cCCCc
Q 018067          254 TVSAV  258 (361)
Q Consensus       254 ~~g~~  258 (361)
                      ++|.+
T Consensus        83 tag~~   87 (154)
T d1pzga1          83 TAGLT   87 (154)
T ss_dssp             CCSCS
T ss_pred             ecccc
Confidence            88754

>d1orra_ c.2.1.2 (A:) CDP-tyvelose-2-epimerase {Salmonella typhi [TaxId: 90370]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Tyrosine-dependent oxidoreductases
domain: CDP-tyvelose-2-epimerase
species: Salmonella typhi [TaxId: 90370]

Probab=93.97  E-value=0.14  Score=43.49  Aligned_cols=73  Identities=16%  Similarity=0.225  Sum_probs=47.7

Q ss_pred             CEEEEEcC-ChHHHHHHHHHHHcCCeEEEEeCCc--hhHH--HHHHHcC-CCE-EecCCCHHHHHHhcC--CccEEEEcC
Q 018067          185 MHVGVVGL-GGLGHVAVKFAKAMGVKVTVISTSP--SKKS--EAIERLG-ADS-FLVSRDQDEMQAAMG--TMDGIIDTV  255 (361)
Q Consensus       185 ~~vlV~Ga-g~vG~~a~~la~~~g~~vi~~~~~~--~~~~--~~~~~~g-~~~-vv~~~~~~~~~~~~~--g~d~vid~~  255 (361)
                      .+|||.|+ |-+|...+..+...|.+|+++++-.  ....  ...+..+ ... ..|-.+.+.+..+..  .+|+||.++
T Consensus         1 ~KILVTGatGfIGs~lv~~Ll~~g~~V~~id~~~~~~~~~~~~~~~~~~~~~~i~~Di~~~~~l~~~~~~~~~d~Vih~a   80 (338)
T d1orra_           1 AKLLITGGCGFLGSNLASFALSQGIDLIVFDNLSRKGATDNLHWLSSLGNFEFVHGDIRNKNDVTRLITKYMPDSCFHLA   80 (338)
T ss_dssp             CEEEEETTTSHHHHHHHHHHHHTTCEEEEEECCCSTTHHHHHHHHHTTCCCEEEECCTTCHHHHHHHHHHHCCSEEEECC
T ss_pred             CEEEEECCCcHHHHHHHHHHHHCcCEEEEEECCCcccchhHHHHhhccCCcEEEEcccCCHHHHHHHHHhcCCceEEeec
Confidence            36999998 9999999999988999999986321  1111  1112232 222 124455565555543  689999998


Q ss_pred             CC
Q 018067          256 SA  257 (361)
Q Consensus       256 g~  257 (361)
                      +.
T Consensus        81 a~   82 (338)
T d1orra_          81 GQ   82 (338)
T ss_dssp             CC
T ss_pred             cc
Confidence            75

>d3lada2 c.3.1.5 (A:159-277) Dihydrolipoamide dehydrogenase {Azotobacter vinelandii [TaxId: 354]}

class: Alpha and beta proteins (a/b)
fold: FAD/NAD(P)-binding domain
superfamily: FAD/NAD(P)-binding domain
family: FAD/NAD-linked reductases, N-terminal and central domains
domain: Dihydrolipoamide dehydrogenase
species: Azotobacter vinelandii [TaxId: 354]

Probab=93.96  E-value=0.05  Score=39.28  Aligned_cols=45  Identities=22%  Similarity=0.312  Sum_probs=36.3

Q ss_pred             hhhhHhhhcCCCCCCCEEEEEcCChHHHHHHHHHHHcCCeEEEEeCCc
Q 018067          170 TVYSPLRFYGLDKPGMHVGVVGLGGLGHVAVKFAKAMGVKVTVISTSP  217 (361)
Q Consensus       170 ta~~~l~~~~~~~~g~~vlV~Gag~vG~~a~~la~~~g~~vi~~~~~~  217 (361)
                      +.+.++. ..  +.+++++|+|+|.+|+=+++.++.+|.+|.++.+.+
T Consensus        11 ~s~~~l~-l~--~~p~~i~IiG~G~ig~E~A~~l~~~G~~Vtiv~~~~   55 (119)
T d3lada2          11 DSTGALD-FQ--NVPGKLGVIGAGVIGLELGSVWARLGAEVTVLEAMD   55 (119)
T ss_dssp             EHHHHTS-CS--SCCSEEEEECCSHHHHHHHHHHHHTTCEEEEEESSS
T ss_pred             chhHhhC-cc--cCCCeEEEECCChHHHHHHHHHHHcCCceEEEEeec
Confidence            4455552 22  456889999999999999999999999999998765

>d2iida1 c.3.1.2 (A:4-319,A:433-486) L-aminoacid oxidase {Malayan pit viper (Calloselasma rhodostoma) [TaxId: 8717]}

class: Alpha and beta proteins (a/b)
fold: FAD/NAD(P)-binding domain
superfamily: FAD/NAD(P)-binding domain
family: FAD-linked reductases, N-terminal domain
domain: L-aminoacid oxidase
species: Malayan pit viper (Calloselasma rhodostoma) [TaxId: 8717]

Probab=93.86  E-value=0.041  Score=46.80  Aligned_cols=37  Identities=32%  Similarity=0.355  Sum_probs=32.6

Q ss_pred             CCCCCEEEEEcCChHHHHHHHHHHHcCCeEEEEeCCc
Q 018067          181 DKPGMHVGVVGLGGLGHVAVKFAKAMGVKVTVISTSP  217 (361)
Q Consensus       181 ~~~g~~vlV~Gag~vG~~a~~la~~~g~~vi~~~~~~  217 (361)
                      ....++|+|+|+|..|+.++..+...|.+|.++...+
T Consensus        27 ~~~pkkV~IIGaG~aGLsaA~~L~~~G~~V~vlE~~~   63 (370)
T d2iida1          27 TSNPKHVVIVGAGMAGLSAAYVLAGAGHQVTVLEASE   63 (370)
T ss_dssp             CSSCCEEEEECCBHHHHHHHHHHHHHTCEEEEECSSS
T ss_pred             CCCCCeEEEECCCHHHHHHHHHHHHCCCCEEEEeCCC
Confidence            3566799999999999999999999999999998654

>d1h6va2 c.3.1.5 (A:171-292) Mammalian thioredoxin reductase {Rat (Rattus norvegicus) [TaxId: 10116]}

class: Alpha and beta proteins (a/b)
fold: FAD/NAD(P)-binding domain
superfamily: FAD/NAD(P)-binding domain
family: FAD/NAD-linked reductases, N-terminal and central domains
domain: Mammalian thioredoxin reductase
species: Rat (Rattus norvegicus) [TaxId: 10116]

Probab=93.86  E-value=0.04  Score=40.04  Aligned_cols=34  Identities=26%  Similarity=0.244  Sum_probs=30.6

Q ss_pred             CCCEEEEEcCChHHHHHHHHHHHcCCeEEEEeCC
Q 018067          183 PGMHVGVVGLGGLGHVAVKFAKAMGVKVTVISTS  216 (361)
Q Consensus       183 ~g~~vlV~Gag~vG~~a~~la~~~g~~vi~~~~~  216 (361)
                      .+++++|+|+|.+|+=.++.++.+|.+|.++.++
T Consensus        19 ~P~~vvIIGgG~iG~E~A~~l~~lG~~Vtii~~~   52 (122)
T d1h6va2          19 CPGKTLVVGASYVALECAGFLAGIGLDVTVMVRS   52 (122)
T ss_dssp             CCCSEEEECCSHHHHHHHHHHHHTTCCEEEEESS
T ss_pred             CCCeEEEECCCccHHHHHHHHhhcCCeEEEEEec
Confidence            4567999999999999999999999999998764

>d1v59a2 c.3.1.5 (A:161-282) Dihydrolipoamide dehydrogenase {Baker's yeast (Saccharomyces cerevisiae) [TaxId: 4932]}

class: Alpha and beta proteins (a/b)
fold: FAD/NAD(P)-binding domain
superfamily: FAD/NAD(P)-binding domain
family: FAD/NAD-linked reductases, N-terminal and central domains
domain: Dihydrolipoamide dehydrogenase
species: Baker's yeast (Saccharomyces cerevisiae) [TaxId: 4932]

Probab=93.84  E-value=0.051  Score=39.45  Aligned_cols=35  Identities=26%  Similarity=0.336  Sum_probs=31.7

Q ss_pred             CCCEEEEEcCChHHHHHHHHHHHcCCeEEEEeCCc
Q 018067          183 PGMHVGVVGLGGLGHVAVKFAKAMGVKVTVISTSP  217 (361)
Q Consensus       183 ~g~~vlV~Gag~vG~~a~~la~~~g~~vi~~~~~~  217 (361)
                      ..++++|+|+|.+|+=+++.+..+|.+|.++.+.+
T Consensus        22 ~p~~~vIiG~G~ig~E~A~~l~~lG~~Vtii~~~~   56 (122)
T d1v59a2          22 IPKRLTIIGGGIIGLEMGSVYSRLGSKVTVVEFQP   56 (122)
T ss_dssp             CCSEEEEECCSHHHHHHHHHHHHTTCEEEEECSSS
T ss_pred             CCCeEEEECCCchHHHHHHHHHhhCcceeEEEecc
Confidence            45789999999999999999999999999988765

>d1c0pa1 c.4.1.2 (A:999-1193,A:1289-1361) D-aminoacid oxidase, N-terminal domain {Rhodotorula gracilis [TaxId: 5286]}

class: Alpha and beta proteins (a/b)
fold: Nucleotide-binding domain
superfamily: Nucleotide-binding domain
family: D-aminoacid oxidase, N-terminal domain
domain: D-aminoacid oxidase, N-terminal domain
species: Rhodotorula gracilis [TaxId: 5286]

Probab=93.78  E-value=0.046  Score=44.63  Aligned_cols=35  Identities=20%  Similarity=0.300  Sum_probs=31.4

Q ss_pred             CCCCEEEEEcCChHHHHHHHHHHHcCCeEEEEeCC
Q 018067          182 KPGMHVGVVGLGGLGHVAVKFAKAMGVKVTVISTS  216 (361)
Q Consensus       182 ~~g~~vlV~Gag~vG~~a~~la~~~g~~vi~~~~~  216 (361)
                      ++-++|+|+|+|..|++++..+...|.+|.++++.
T Consensus         4 ~~~~kVvVIGaGiaGl~~A~~L~~~G~~V~vier~   38 (268)
T d1c0pa1           4 HSQKRVVVLGSGVIGLSSALILARKGYSVHILARD   38 (268)
T ss_dssp             CCSCEEEEECCSHHHHHHHHHHHHTTCEEEEEESS
T ss_pred             CCCCcEEEECccHHHHHHHHHHHHCCCCEEEEeCC
Confidence            45568999999999999999999999999999864

>d1ldna1 c.2.1.5 (A:15-162) Lactate dehydrogenase {Bacillus stearothermophilus [TaxId: 1422]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: LDH N-terminal domain-like
domain: Lactate dehydrogenase
species: Bacillus stearothermophilus [TaxId: 1422]

Probab=93.72  E-value=0.17  Score=37.90  Aligned_cols=73  Identities=19%  Similarity=0.166  Sum_probs=47.9

Q ss_pred             CCCCEEEEEcCChHHHHHHHHHHHcCC--eEEEEeCCchhHHHHHHHcC------C-CEEecCCCHHHHHHhcCCccEEE
Q 018067          182 KPGMHVGVVGLGGLGHVAVKFAKAMGV--KVTVISTSPSKKSEAIERLG------A-DSFLVSRDQDEMQAAMGTMDGII  252 (361)
Q Consensus       182 ~~g~~vlV~Gag~vG~~a~~la~~~g~--~vi~~~~~~~~~~~~~~~~g------~-~~vv~~~~~~~~~~~~~g~d~vi  252 (361)
                      ..+.+|.|+|+|.+|...++.+...+.  ++..++..+++....+.++.      . ...+...+.    +...+.|+|+
T Consensus         4 ~~~~KI~IiGaG~vG~~~a~~l~~~~l~~el~L~Di~~~~~~g~a~Dl~~~~~~~~~~~~~~~~d~----~~l~daDvvv   79 (148)
T d1ldna1           4 NGGARVVVIGAGFVGASYVFALMNQGIADEIVLIDANESKAIGDAMDFNHGKVFAPKPVDIWHGDY----DDCRDADLVV   79 (148)
T ss_dssp             TTSCEEEEECCSHHHHHHHHHHHHHTCCSEEEEECSSHHHHHHHHHHHHHHTTSSSSCCEEEECCG----GGTTTCSEEE
T ss_pred             CCCCeEEEECcCHHHHHHHHHHHhcCCCceEEEEeeccccccchhccHhhCccccCCCeEEEECCH----HHhccceeEE
Confidence            457789999999999999999888765  78888887765433333331      1 111111121    2345789999


Q ss_pred             EcCCCc
Q 018067          253 DTVSAV  258 (361)
Q Consensus       253 d~~g~~  258 (361)
                      -++|.+
T Consensus        80 itag~~   85 (148)
T d1ldna1          80 ICAGAN   85 (148)
T ss_dssp             ECCSCC
T ss_pred             Eecccc
Confidence            988864

>d1hdgo1 c.2.1.3 (O:1-148,O:313-331) Glyceraldehyde-3-phosphate dehydrogenase (GAPDH) {Thermotoga maritima [TaxId: 2336]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Glyceraldehyde-3-phosphate dehydrogenase-like, N-terminal domain
domain: Glyceraldehyde-3-phosphate dehydrogenase (GAPDH)
species: Thermotoga maritima [TaxId: 2336]

Probab=93.68  E-value=0.13  Score=39.40  Aligned_cols=96  Identities=16%  Similarity=0.215  Sum_probs=60.8

Q ss_pred             CEEEEEcCChHHHHHHHHHHHc---CCeEEEEeCCchhHHHHHHHc------C---CC---------------EEecCCC
Q 018067          185 MHVGVVGLGGLGHVAVKFAKAM---GVKVTVISTSPSKKSEAIERL------G---AD---------------SFLVSRD  237 (361)
Q Consensus       185 ~~vlV~Gag~vG~~a~~la~~~---g~~vi~~~~~~~~~~~~~~~~------g---~~---------------~vv~~~~  237 (361)
                      .+|.|.|-|-+|..+...+...   ..+++.+.+.. ..+.++.-+      |   .+               .++..++
T Consensus         1 ~kIgINGfGRIGR~v~R~~~~~~~~~i~vvaINd~~-~~e~~ayLlkyDS~hG~~~~~v~~~~~~l~ing~~I~~~~~~~   79 (169)
T d1hdgo1           1 ARVAINGFGRIGRLVYRIIYERKNPDIEVVAINDLT-DTKTLAHLLKYDSVHKKFPGKVEYTENSLIVDGKEIKVFAEPD   79 (169)
T ss_dssp             CEEEEECCSHHHHHHHHHHHHHTCTTCEEEEEECSS-CHHHHHHHHHCCTTTCCCSSCEEECSSEEEETTEEEEEECCSS
T ss_pred             CEEEEECCChHHHHHHHHHHhccCCCEEEEEeccCc-cHHHHHHHHhccccccccCceEEEECCEEEECCEEEEEEeCCC
Confidence            3688999999999999877643   46887776543 223332211      1   00               1111222


Q ss_pred             HHHHHHhcCCccEEEEcCCCcccHHHHHhccccCCEEEEecCCC
Q 018067          238 QDEMQAAMGTMDGIIDTVSAVHPLMPLIGLLKSQGKLVLVGAPE  281 (361)
Q Consensus       238 ~~~~~~~~~g~d~vid~~g~~~~~~~~~~~l~~~G~~v~~g~~~  281 (361)
                      ++.+.+..-++|+|+||+|.-.....+...+..|-+-+.+..+.
T Consensus        80 p~~i~W~~~gvD~ViEcTG~f~t~~~~~~hl~~GakkViiSAP~  123 (169)
T d1hdgo1          80 PSKLPWKDLGVDFVIESTGVFRNREKAELHLQAGAKKVIITAPA  123 (169)
T ss_dssp             GGGSCHHHHTCCEEEECSSSCCBHHHHTHHHHTTCSEEEESSCC
T ss_pred             hhhCCccccCCCEEEEecceeccccchhhhccCCCceEEEeccc
Confidence            33333333489999999999777888888998877666666554

>d1tw3a2 c.66.1.12 (A:99-351) Carminomycin 4-O-methyltransferase {Streptomyces peucetius [TaxId: 1950]}

class: Alpha and beta proteins (a/b)
fold: S-adenosyl-L-methionine-dependent methyltransferases
superfamily: S-adenosyl-L-methionine-dependent methyltransferases
family: Plant O-methyltransferase, C-terminal domain
domain: Carminomycin 4-O-methyltransferase
species: Streptomyces peucetius [TaxId: 1950]

Probab=93.68  E-value=0.04  Score=45.58  Aligned_cols=99  Identities=20%  Similarity=0.144  Sum_probs=58.4

Q ss_pred             CCCCCCCEEEEEcCChHHHHHHHHHHHc-CCeEEEEeCCchhHHHH---HHHcCCCEEecCCCHHHHHHhcCCccEEEEc
Q 018067          179 GLDKPGMHVGVVGLGGLGHVAVKFAKAM-GVKVTVISTSPSKKSEA---IERLGADSFLVSRDQDEMQAAMGTMDGIIDT  254 (361)
Q Consensus       179 ~~~~~g~~vlV~Gag~vG~~a~~la~~~-g~~vi~~~~~~~~~~~~---~~~~g~~~vv~~~~~~~~~~~~~g~d~vid~  254 (361)
                      ..+.+..+||=+|+|. |..++.+++.. +.++++++.. +.....   ..+.|...-+.....|.......++|+|+-.
T Consensus        76 ~d~~~~~~VLDvGcG~-G~~~~~la~~~p~~~~~~~D~~-~~~~~a~~~~~~~~~~~rv~~~~~D~~~~~~~~~D~v~~~  153 (253)
T d1tw3a2          76 YDWTNVRHVLDVGGGK-GGFAAAIARRAPHVSATVLEMA-GTVDTARSYLKDEGLSDRVDVVEGDFFEPLPRKADAIILS  153 (253)
T ss_dssp             SCCTTCSEEEEETCTT-SHHHHHHHHHCTTCEEEEEECT-THHHHHHHHHHHTTCTTTEEEEECCTTSCCSSCEEEEEEE
T ss_pred             cCCccCCEEEEeCCCC-CHHHHHHHHhcceeEEEEccCH-HHHHHHHHHHHHhhcccchhhccccchhhcccchhheeec
Confidence            3467778898898864 78888999887 5688888764 322222   2333421101111111111223478998743


Q ss_pred             CC-----Cc---ccHHHHHhccccCCEEEEecC
Q 018067          255 VS-----AV---HPLMPLIGLLKSQGKLVLVGA  279 (361)
Q Consensus       255 ~g-----~~---~~~~~~~~~l~~~G~~v~~g~  279 (361)
                      .-     .+   ..+..+.+.|+|+|+++....
T Consensus       154 ~vlh~~~d~~~~~~L~~~~~~LkPGG~l~i~e~  186 (253)
T d1tw3a2         154 FVLLNWPDHDAVRILTRCAEALEPGGRILIHER  186 (253)
T ss_dssp             SCGGGSCHHHHHHHHHHHHHTEEEEEEEEEEEC
T ss_pred             cccccCCchhhHHHHHHHHHhcCCCcEEEEEec
Confidence            22     11   236678899999999998754

>d1gado1 c.2.1.3 (O:0-148,O:313-330) Glyceraldehyde-3-phosphate dehydrogenase (GAPDH) {Escherichia coli [TaxId: 562]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Glyceraldehyde-3-phosphate dehydrogenase-like, N-terminal domain
domain: Glyceraldehyde-3-phosphate dehydrogenase (GAPDH)
species: Escherichia coli [TaxId: 562]

Probab=93.48  E-value=0.16  Score=38.83  Aligned_cols=95  Identities=16%  Similarity=0.239  Sum_probs=62.7

Q ss_pred             EEEEEcCChHHHHHHHHHHHcC-CeEEEEeCCchhHHHHHHHc------C---CC---------------EEecCCCHHH
Q 018067          186 HVGVVGLGGLGHVAVKFAKAMG-VKVTVISTSPSKKSEAIERL------G---AD---------------SFLVSRDQDE  240 (361)
Q Consensus       186 ~vlV~Gag~vG~~a~~la~~~g-~~vi~~~~~~~~~~~~~~~~------g---~~---------------~vv~~~~~~~  240 (361)
                      +|.|.|-|-+|.++...+.... .+++.+.+.. ..+.++.-+      |   .+               .+...++++.
T Consensus         3 kigINGFGRIGR~v~R~~~~~~~i~ivaINd~~-~~~~~ayLl~yDSvhG~~~~~v~~~~~~l~ing~~I~i~~~~~p~~   81 (166)
T d1gado1           3 KVGINGFGRIGRIVFRAAQKRSDIEIVAINDLL-DADYMAYMLKYDSTHGRFDGTVEVKDGHLIVNGKKIRVTAERDPAN   81 (166)
T ss_dssp             EEEEECCSHHHHHHHHHHHTCSSEEEEEEECSS-CHHHHHHHHHCCTTTCSCSSCEEEETTEEEETTEEEEEECCSSGGG
T ss_pred             EEEEECCcHHHHHHHHHHhhCCCeEEEEEeCCC-CHHHHhhhheecCCCCCcCCeEEEeCCEEEECCEEEEEEeCCChHH
Confidence            5788999999999999887764 5887777654 233333222      1   10               0111222334


Q ss_pred             HHHhcCCccEEEEcCCCcccHHHHHhccccCCEEEEecCCC
Q 018067          241 MQAAMGTMDGIIDTVSAVHPLMPLIGLLKSQGKLVLVGAPE  281 (361)
Q Consensus       241 ~~~~~~g~d~vid~~g~~~~~~~~~~~l~~~G~~v~~g~~~  281 (361)
                      +.+-.-++|+|+||+|.-...+.+...+..+-+-|.+..+.
T Consensus        82 i~W~~~gvDiViEcTG~f~t~~~~~~hl~~gakkViiSaP~  122 (166)
T d1gado1          82 LKWDEVGVDVVAEATGLFLTDETARKHITAGAKKVVMTGPS  122 (166)
T ss_dssp             GCHHHHTCSEEEECSSSCCSHHHHTHHHHTTCSEEEESSCC
T ss_pred             CCccccCCCEEEEccccccCHHHHHHHhcCCCceEEeeccc
Confidence            43434489999999999877888888898887667776554

>d1lvla2 c.3.1.5 (A:151-265) Dihydrolipoamide dehydrogenase {Pseudomonas putida [TaxId: 303]}

class: Alpha and beta proteins (a/b)
fold: FAD/NAD(P)-binding domain
superfamily: FAD/NAD(P)-binding domain
family: FAD/NAD-linked reductases, N-terminal and central domains
domain: Dihydrolipoamide dehydrogenase
species: Pseudomonas putida [TaxId: 303]

Probab=93.45  E-value=0.058  Score=38.63  Aligned_cols=35  Identities=26%  Similarity=0.292  Sum_probs=31.5

Q ss_pred             CCCEEEEEcCChHHHHHHHHHHHcCCeEEEEeCCc
Q 018067          183 PGMHVGVVGLGGLGHVAVKFAKAMGVKVTVISTSP  217 (361)
Q Consensus       183 ~g~~vlV~Gag~vG~~a~~la~~~g~~vi~~~~~~  217 (361)
                      .+++++|+|+|.+|+=+++.++.+|.+|.++.+.+
T Consensus        20 ~p~~vvIiGgG~~G~E~A~~l~~~g~~Vtlve~~~   54 (115)
T d1lvla2          20 LPQHLVVVGGGYIGLELGIAYRKLGAQVSVVEARE   54 (115)
T ss_dssp             CCSEEEEECCSHHHHHHHHHHHHHTCEEEEECSSS
T ss_pred             CCCeEEEECCCHHHHHHHHHHhhcccceEEEeeec
Confidence            45889999999999999999999999999987764

>d1q1ra2 c.3.1.5 (A:115-247) Putidaredoxin reductase {Pseudomonas putida [TaxId: 303]}

class: Alpha and beta proteins (a/b)
fold: FAD/NAD(P)-binding domain
superfamily: FAD/NAD(P)-binding domain
family: FAD/NAD-linked reductases, N-terminal and central domains
domain: Putidaredoxin reductase
species: Pseudomonas putida [TaxId: 303]

Probab=93.43  E-value=0.074  Score=39.19  Aligned_cols=37  Identities=22%  Similarity=0.204  Sum_probs=33.5

Q ss_pred             CCCCCEEEEEcCChHHHHHHHHHHHcCCeEEEEeCCc
Q 018067          181 DKPGMHVGVVGLGGLGHVAVKFAKAMGVKVTVISTSP  217 (361)
Q Consensus       181 ~~~g~~vlV~Gag~vG~~a~~la~~~g~~vi~~~~~~  217 (361)
                      ++++++++|+|+|.+|+=++..++..|.+|.++.+.+
T Consensus        32 ~~~~k~v~VIGgG~iG~E~A~~l~~~g~~Vtvie~~~   68 (133)
T d1q1ra2          32 LIADNRLVVIGGGYIGLEVAATAIKANMHVTLLDTAA   68 (133)
T ss_dssp             CCTTCEEEEECCSHHHHHHHHHHHHTTCEEEEECSSS
T ss_pred             hccCCEEEEECCchHHHHHHHHHHhhCcceeeeeecc
Confidence            4678999999999999999999999999999998765

>d1omoa_ c.2.1.13 (A:) Archaeal alanine dehydrogenase {Archaeon Archaeoglobus fulgidus [TaxId: 2234]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Ornithine cyclodeaminase-like
domain: Archaeal alanine dehydrogenase
species: Archaeon Archaeoglobus fulgidus [TaxId: 2234]

Probab=93.43  E-value=0.18  Score=43.08  Aligned_cols=107  Identities=12%  Similarity=0.180  Sum_probs=72.0

Q ss_pred             hhcCCCCCCCEEEEEcCChHHHHHHHHHHH-cCC-eEEEEeCCchhHHHHHHHc---CCCEEecCCCHHHHHHhcCCccE
Q 018067          176 RFYGLDKPGMHVGVVGLGGLGHVAVKFAKA-MGV-KVTVISTSPSKKSEAIERL---GADSFLVSRDQDEMQAAMGTMDG  250 (361)
Q Consensus       176 ~~~~~~~~g~~vlV~Gag~vG~~a~~la~~-~g~-~vi~~~~~~~~~~~~~~~~---g~~~vv~~~~~~~~~~~~~g~d~  250 (361)
                      +..++ +..+++.|+|+|..+...++.+.. +.. +|.+..++.++.+.+++.+   +.....+  ..    +...+.|+
T Consensus       118 ~~la~-~~~~~l~iiGaG~QA~~~~~al~~~~~i~~i~v~~r~~e~~~~~~~~~~~~~~~~~~~--~~----~a~~~aDi  190 (320)
T d1omoa_         118 KYLAR-KNSSVFGFIGCGTQAYFQLEALRRVFDIGEVKAYDVREKAAKKFVSYCEDRGISASVQ--PA----EEASRCDV  190 (320)
T ss_dssp             HHHSC-TTCCEEEEECCSHHHHHHHHHHHHHSCCCEEEEECSSHHHHHHHHHHHHHTTCCEEEC--CH----HHHTSSSE
T ss_pred             HHhcc-CCccEEEEecCcccHHHHHHHHHHHhhhhhcccccCCHHHHHHHHHHHHhcCCccccc--hh----hhhccccE
Confidence            33443 566788999999999888887765 555 8888999988776665544   3333221  21    22357999


Q ss_pred             EEEcCCCcccHHHHHhccccCCEEEEecCCCC-CcccChHH
Q 018067          251 IIDTVSAVHPLMPLIGLLKSQGKLVLVGAPEK-PLELPAFS  290 (361)
Q Consensus       251 vid~~g~~~~~~~~~~~l~~~G~~v~~g~~~~-~~~~~~~~  290 (361)
                      |+-++.+...+ .-.+.+++|-.+..+|.... .-+++...
T Consensus       191 V~taT~s~~P~-~~~~~l~~G~hv~~iGs~~p~~~Eld~~~  230 (320)
T d1omoa_         191 LVTTTPSRKPV-VKAEWVEEGTHINAIGADGPGKQELDVEI  230 (320)
T ss_dssp             EEECCCCSSCC-BCGGGCCTTCEEEECSCCSTTCCCBCHHH
T ss_pred             EEEeccCcccc-cchhhcCCCCeEeecCCccccccccCHHH
Confidence            99988875422 23457899999999998654 34555543

>d1ojta2 c.3.1.5 (A:276-400) Dihydrolipoamide dehydrogenase {Neisseria meningitidis [TaxId: 487]}

class: Alpha and beta proteins (a/b)
fold: FAD/NAD(P)-binding domain
superfamily: FAD/NAD(P)-binding domain
family: FAD/NAD-linked reductases, N-terminal and central domains
domain: Dihydrolipoamide dehydrogenase
species: Neisseria meningitidis [TaxId: 487]

Probab=93.34  E-value=0.061  Score=39.22  Aligned_cols=36  Identities=14%  Similarity=0.187  Sum_probs=32.6

Q ss_pred             CCCCEEEEEcCChHHHHHHHHHHHcCCeEEEEeCCc
Q 018067          182 KPGMHVGVVGLGGLGHVAVKFAKAMGVKVTVISTSP  217 (361)
Q Consensus       182 ~~g~~vlV~Gag~vG~~a~~la~~~g~~vi~~~~~~  217 (361)
                      +.+++++|+|+|.+|+=+++.++.+|.+|.++.+.+
T Consensus        24 ~~p~~vvIiGgG~IG~E~A~~~~~~G~~Vtive~~~   59 (125)
T d1ojta2          24 EVPGKLLIIGGGIIGLEMGTVYSTLGSRLDVVEMMD   59 (125)
T ss_dssp             CCCSEEEEESCSHHHHHHHHHHHHHTCEEEEECSSS
T ss_pred             ccCCeEEEECCCHHHHHHHHHhhcCCCEEEEEEeec
Confidence            556899999999999999999999999999998764

>d1dxla2 c.3.1.5 (A:153-275) Dihydrolipoamide dehydrogenase {Garden pea (Pisum sativum) [TaxId: 3888]}

class: Alpha and beta proteins (a/b)
fold: FAD/NAD(P)-binding domain
superfamily: FAD/NAD(P)-binding domain
family: FAD/NAD-linked reductases, N-terminal and central domains
domain: Dihydrolipoamide dehydrogenase
species: Garden pea (Pisum sativum) [TaxId: 3888]

Probab=93.32  E-value=0.044  Score=39.89  Aligned_cols=36  Identities=22%  Similarity=0.251  Sum_probs=32.8

Q ss_pred             CCCCEEEEEcCChHHHHHHHHHHHcCCeEEEEeCCc
Q 018067          182 KPGMHVGVVGLGGLGHVAVKFAKAMGVKVTVISTSP  217 (361)
Q Consensus       182 ~~g~~vlV~Gag~vG~~a~~la~~~g~~vi~~~~~~  217 (361)
                      +.+++++|+|+|.+|+=+++.++.+|.+|.++.+.+
T Consensus        23 ~~p~~~viiG~G~iglE~A~~~~~~G~~Vtvi~~~~   58 (123)
T d1dxla2          23 EIPKKLVVIGAGYIGLEMGSVWGRIGSEVTVVEFAS   58 (123)
T ss_dssp             SCCSEEEESCCSHHHHHHHHHHHHHTCEEEEECSSS
T ss_pred             ccCCeEEEEccchHHHHHHHHHHhcCCeEEEEEEcc
Confidence            456889999999999999999999999999998765

>d3grsa2 c.3.1.5 (A:166-290) Glutathione reductase {Human (Homo sapiens) [TaxId: 9606]}

class: Alpha and beta proteins (a/b)
fold: FAD/NAD(P)-binding domain
superfamily: FAD/NAD(P)-binding domain
family: FAD/NAD-linked reductases, N-terminal and central domains
domain: Glutathione reductase
species: Human (Homo sapiens) [TaxId: 9606]

Probab=93.31  E-value=0.07  Score=38.82  Aligned_cols=35  Identities=17%  Similarity=0.172  Sum_probs=31.9

Q ss_pred             CCCEEEEEcCChHHHHHHHHHHHcCCeEEEEeCCc
Q 018067          183 PGMHVGVVGLGGLGHVAVKFAKAMGVKVTVISTSP  217 (361)
Q Consensus       183 ~g~~vlV~Gag~vG~~a~~la~~~g~~vi~~~~~~  217 (361)
                      ..++++|+|+|.+|+=++..++.+|.+|.++.+.+
T Consensus        21 ~pk~vvIvGgG~iG~E~A~~l~~~G~~Vtlv~~~~   55 (125)
T d3grsa2          21 LPGRSVIVGAGYIAVEMAGILSALGSKTSLMIRHD   55 (125)
T ss_dssp             CCSEEEEECCSHHHHHHHHHHHHTTCEEEEECSSS
T ss_pred             cCCEEEEEcCCccHHHHHHHHhcCCcEEEEEeecc
Confidence            34789999999999999999999999999998875

>d2i6ga1 c.66.1.44 (A:1-198) Putative methyltransferase TehB {Salmonella typhimurium [TaxId: 90371]}

class: Alpha and beta proteins (a/b)
fold: S-adenosyl-L-methionine-dependent methyltransferases
superfamily: S-adenosyl-L-methionine-dependent methyltransferases
family: TehB-like
domain: Putative methyltransferase TehB
species: Salmonella typhimurium [TaxId: 90371]

Probab=93.24  E-value=0.081  Score=41.70  Aligned_cols=94  Identities=22%  Similarity=0.226  Sum_probs=58.1

Q ss_pred             CCCCCEEEEEcCChHHHHHHHHHHHcCCeEEEEeCCchhHHHH---HHHcCCCE-EecCCCHHHHHHhcCCccEEEEcCC
Q 018067          181 DKPGMHVGVVGLGGLGHVAVKFAKAMGVKVTVISTSPSKKSEA---IERLGADS-FLVSRDQDEMQAAMGTMDGIIDTVS  256 (361)
Q Consensus       181 ~~~g~~vlV~Gag~vG~~a~~la~~~g~~vi~~~~~~~~~~~~---~~~~g~~~-vv~~~~~~~~~~~~~g~d~vid~~g  256 (361)
                      +++| +||=+|+| .|..+..+++ .|++|+.++-+++..+.+   ++..+.+. -+...+.+.. ...+.+|+|+...-
T Consensus        29 ~~~g-rvLDiGcG-~G~~~~~la~-~g~~v~gvD~s~~~l~~a~~~~~~~~~~~~~~~~~d~~~~-~~~~~fD~I~~~~~  104 (198)
T d2i6ga1          29 VAPG-RTLDLGCG-NGRNSLYLAA-NGYDVTAWDKNPASMANLERIKAAEGLDNLQTDLVDLNTL-TFDGEYDFILSTVV  104 (198)
T ss_dssp             SCSC-EEEEETCT-TSHHHHHHHH-TTCEEEEEESCHHHHHHHHHHHHHTTCTTEEEEECCTTTC-CCCCCEEEEEEESC
T ss_pred             CCCC-cEEEECCC-CCHHHHHHHH-HhhhhccccCcHHHHHHHHHHhhhccccchhhhheecccc-cccccccEEEEeee
Confidence            4555 79889997 6888877776 589999999988665443   23334432 1111111110 12246899886332


Q ss_pred             C-----c---ccHHHHHhccccCCEEEEec
Q 018067          257 A-----V---HPLMPLIGLLKSQGKLVLVG  278 (361)
Q Consensus       257 ~-----~---~~~~~~~~~l~~~G~~v~~g  278 (361)
                      -     +   ..+..+.++|+++|.++...
T Consensus       105 ~~~~~~~~~~~~l~~~~~~L~pgG~~~~~~  134 (198)
T d2i6ga1         105 MMFLEAQTIPGLIANMQRCTKPGGYNLIVA  134 (198)
T ss_dssp             GGGSCTTHHHHHHHHHHHTEEEEEEEEEEE
T ss_pred             eecCCHHHHHHHHHHHHHHcCCCcEEEEEE
Confidence            1     1   24667888899999988764

>d1xvaa_ c.66.1.5 (A:) Glycine N-methyltransferase {Rat (Rattus norvegicus) [TaxId: 10116]}

class: Alpha and beta proteins (a/b)
fold: S-adenosyl-L-methionine-dependent methyltransferases
superfamily: S-adenosyl-L-methionine-dependent methyltransferases
family: Glycine N-methyltransferase
domain: Glycine N-methyltransferase
species: Rat (Rattus norvegicus) [TaxId: 10116]

Probab=93.21  E-value=0.084  Score=44.48  Aligned_cols=93  Identities=17%  Similarity=0.186  Sum_probs=57.7

Q ss_pred             CCCCEEEEEcCChHHHHHHHHHHHcCCeEEEEeCCchhHHHHHHH---cCCC-----EEecCCCHHHHH-H--hcCCccE
Q 018067          182 KPGMHVGVVGLGGLGHVAVKFAKAMGVKVTVISTSPSKKSEAIER---LGAD-----SFLVSRDQDEMQ-A--AMGTMDG  250 (361)
Q Consensus       182 ~~g~~vlV~Gag~vG~~a~~la~~~g~~vi~~~~~~~~~~~~~~~---~g~~-----~vv~~~~~~~~~-~--~~~g~d~  250 (361)
                      +++.+||=+|+|. |..++.+++. |++|+.++-+++....+.+.   .+..     ..+..-+..... .  ..+.+|.
T Consensus        55 ~~~~~vLD~GcG~-G~~~~~la~~-g~~v~gvD~S~~ml~~A~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~fd~  132 (292)
T d1xvaa_          55 HGCHRVLDVACGT-GVDSIMLVEE-GFSVTSVDASDKMLKYALKERWNRRKEPAFDKWVIEEANWLTLDKDVPAGDGFDA  132 (292)
T ss_dssp             TTCCEEEESSCTT-SHHHHHHHHT-TCEEEEEESCHHHHHHHHHHHHHTTTSHHHHTCEEEECCGGGHHHHSCCTTCEEE
T ss_pred             cCCCEEEEecCCC-cHHHHHHHHc-CCeeeeccCchHHHHHHHHHHHhcccccccceeeeeeccccccccccCCCCCceE
Confidence            5678899999864 7777788875 89999999998765444222   1211     011111111111 1  1247999


Q ss_pred             EEEcCCC-c-------------ccHHHHHhccccCCEEEE
Q 018067          251 IIDTVSA-V-------------HPLMPLIGLLKSQGKLVL  276 (361)
Q Consensus       251 vid~~g~-~-------------~~~~~~~~~l~~~G~~v~  276 (361)
                      |+..... .             ..+..+.+.|+|||.++.
T Consensus       133 v~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~LkpgG~li~  172 (292)
T d1xvaa_         133 VICLGNSFAHLPDSKGDQSEHRLALKNIASMVRPGGLLVI  172 (292)
T ss_dssp             EEECSSCGGGSCCTTSSSHHHHHHHHHHHHTEEEEEEEEE
T ss_pred             EEEecCchhhcCCcccChHHHHHHHHHHHHHcCcCcEEEE
Confidence            8864321 0             147889999999999887

>d1im8a_ c.66.1.14 (A:) Hypothetical protein HI0319 (YecO) {Haemophilus influenzae [TaxId: 727]}

class: Alpha and beta proteins (a/b)
fold: S-adenosyl-L-methionine-dependent methyltransferases
superfamily: S-adenosyl-L-methionine-dependent methyltransferases
family: Hypothetical protein HI0319 (YecO)
domain: Hypothetical protein HI0319 (YecO)
species: Haemophilus influenzae [TaxId: 727]

Probab=93.15  E-value=0.067  Score=43.16  Aligned_cols=97  Identities=15%  Similarity=0.119  Sum_probs=59.5

Q ss_pred             CCCCCEEEEEcCChHHHHHHHHHHH---cCCeEEEEeCCchhHHHHHHHc---CCCEEecCCCHHHHHHhcCCccEEEEc
Q 018067          181 DKPGMHVGVVGLGGLGHVAVKFAKA---MGVKVTVISTSPSKKSEAIERL---GADSFLVSRDQDEMQAAMGTMDGIIDT  254 (361)
Q Consensus       181 ~~~g~~vlV~Gag~vG~~a~~la~~---~g~~vi~~~~~~~~~~~~~~~~---g~~~vv~~~~~~~~~~~~~g~d~vid~  254 (361)
                      .+++.+||=+|+|. |..+..+++.   .+++|+.++-+++..+.+.+++   +....+.....+...--...+|+++-+
T Consensus        37 ~~~~~~vLDlGCGt-G~~~~~l~~~~~~~~~~v~giD~S~~ml~~A~~~~~~~~~~~~~~~~~~d~~~~~~~~~d~i~~~  115 (225)
T d1im8a_          37 VTADSNVYDLGCSR-GAATLSARRNINQPNVKIIGIDNSQPMVERCRQHIAAYHSEIPVEILCNDIRHVEIKNASMVILN  115 (225)
T ss_dssp             CCTTCEEEEESCTT-CHHHHHHHHTCCCSSCEEEEECSCHHHHHHHHHHHHTSCCSSCEEEECSCTTTCCCCSEEEEEEE
T ss_pred             cCCCCEEEEeccch-hhHHHHHHHhhcCCCCceEEeCCCHHHHHHHHHHhHhhcccchhhhccchhhccccccceeeEEe
Confidence            47899999999864 6666677764   4789999999988766654332   221111111111111111356666543


Q ss_pred             CCC--------cccHHHHHhccccCCEEEEec
Q 018067          255 VSA--------VHPLMPLIGLLKSQGKLVLVG  278 (361)
Q Consensus       255 ~g~--------~~~~~~~~~~l~~~G~~v~~g  278 (361)
                      ..-        ...+..+.+.|+|+|.++...
T Consensus       116 ~~l~~~~~~d~~~~l~~i~~~LkpgG~li~~~  147 (225)
T d1im8a_         116 FTLQFLPPEDRIALLTKIYEGLNPNGVLVLSE  147 (225)
T ss_dssp             SCGGGSCGGGHHHHHHHHHHHEEEEEEEEEEE
T ss_pred             eeccccChhhHHHHHHHHHHhCCCCceeeccc
Confidence            321        135778999999999999763

>d1zh8a1 c.2.1.3 (A:4-131,A:276-328) Hypothetical protein TM0312 {Thermotoga maritima [TaxId: 2336]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Glyceraldehyde-3-phosphate dehydrogenase-like, N-terminal domain
domain: Hypothetical protein TM0312
species: Thermotoga maritima [TaxId: 2336]

Probab=93.10  E-value=1.1  Score=34.16  Aligned_cols=129  Identities=19%  Similarity=0.229  Sum_probs=76.1

Q ss_pred             EEEEEcCChHHHH-HHHHHHHc-C-CeEEEEe-CCchhHHHHHHHcCCCEEecCCCHHHHHHhc-CCccEEEEcCCCccc
Q 018067          186 HVGVVGLGGLGHV-AVKFAKAM-G-VKVTVIS-TSPSKKSEAIERLGADSFLVSRDQDEMQAAM-GTMDGIIDTVSAVHP  260 (361)
Q Consensus       186 ~vlV~Gag~vG~~-a~~la~~~-g-~~vi~~~-~~~~~~~~~~~~~g~~~vv~~~~~~~~~~~~-~g~d~vid~~g~~~~  260 (361)
                      +|.|+|+|.+|.- .+..++.. + ++++.+. ++.++...+.++++...++  .+.+.+  +. ..+|+|+-++....-
T Consensus         5 rigiIG~G~~g~~~h~~~l~~~~~~~~i~~v~d~~~~~~~~~~~~~~~~~~~--~~~~el--l~~~~id~v~I~tp~~~h   80 (181)
T d1zh8a1           5 RLGIVGCGIAARELHLPALKNLSHLFEITAVTSRTRSHAEEFAKMVGNPAVF--DSYEEL--LESGLVDAVDLTLPVELN   80 (181)
T ss_dssp             EEEEECCSHHHHHTHHHHHHTTTTTEEEEEEECSSHHHHHHHHHHHSSCEEE--SCHHHH--HHSSCCSEEEECCCGGGH
T ss_pred             EEEEEcCCHHHHHHHHHHHHhCCCCeEEEEEEeccHhhhhhhhcccccccee--eeeecc--ccccccceeecccccccc
Confidence            5889999999974 56666654 3 4676554 5555666777788876553  332221  22 469999888876543


Q ss_pred             HHHHHhccccCCEEEEecCCCCCcccChHH------HH-hCCcEE-EecccC-C--HHHHHHHHHHHHcCCCc
Q 018067          261 LMPLIGLLKSQGKLVLVGAPEKPLELPAFS------LL-MGRKIV-GGSMIG-G--MKETQEMIDFAAKHNIR  322 (361)
Q Consensus       261 ~~~~~~~l~~~G~~v~~g~~~~~~~~~~~~------~~-~~~~~i-~g~~~~-~--~~~~~~~~~ll~~~~~~  322 (361)
                      ...+..++.. |.-|.+.-   +...+..+      +. .++..+ .+.... +  ...+.++.+++.+|++-
T Consensus        81 ~~~~~~al~~-gk~V~~EK---Pl~~~~~e~~~l~~~~~~~~~~~~v~~~~R~~~~~~~~~~~~~~i~~G~ig  149 (181)
T d1zh8a1          81 LPFIEKALRK-GVHVICEK---PISTDVETGKKVVELSEKSEKTVYIAENFRENSYQKEFEDFYQVVAEGKPN  149 (181)
T ss_dssp             HHHHHHHHHT-TCEEEEES---SSSSSHHHHHHHHHHHHHCSSCEEEECGGGCCHHHHHHHHHHHHHHSCCCC
T ss_pred             cccccccccc-chhhhcCC---CCcCCHHHHHHHHHHHHHhCCeEEEEeeccccccCHHHHHHHHHHHCCCCc
Confidence            5566666665 46666643   33333222      22 133333 443322 2  24577888888888764

>d1wzna1 c.66.1.43 (A:1-251) Hypothetical methyltransferase PH1305 {Archaeon Pyrococcus horikoshii [TaxId: 53953]}

class: Alpha and beta proteins (a/b)
fold: S-adenosyl-L-methionine-dependent methyltransferases
superfamily: S-adenosyl-L-methionine-dependent methyltransferases
family: CAC2371-like
domain: Hypothetical methyltransferase PH1305
species: Archaeon Pyrococcus horikoshii [TaxId: 53953]

Probab=93.05  E-value=0.15  Score=41.52  Aligned_cols=93  Identities=16%  Similarity=0.140  Sum_probs=59.6

Q ss_pred             CCCCCEEEEEcCChHHHHHHHHHHHcCCeEEEEeCCchhHHHHHHH---cCCCEEecCCCHHHHHHhcCCccEEEEcCCC
Q 018067          181 DKPGMHVGVVGLGGLGHVAVKFAKAMGVKVTVISTSPSKKSEAIER---LGADSFLVSRDQDEMQAAMGTMDGIIDTVSA  257 (361)
Q Consensus       181 ~~~g~~vlV~Gag~vG~~a~~la~~~g~~vi~~~~~~~~~~~~~~~---~g~~~vv~~~~~~~~~~~~~g~d~vid~~g~  257 (361)
                      .+++++||=+|+|. |..+..+++ .|++|+.++-+++-...+.+.   .+...-+-..+...+ ...+.+|+|+-.-+.
T Consensus        39 ~~~~~~iLDiGcGt-G~~~~~l~~-~~~~v~gvD~s~~mi~~a~~~~~~~~~~i~~~~~d~~~l-~~~~~fD~I~~~~~~  115 (251)
T d1wzna1          39 KREVRRVLDLACGT-GIPTLELAE-RGYEVVGLDLHEEMLRVARRKAKERNLKIEFLQGDVLEI-AFKNEFDAVTMFFST  115 (251)
T ss_dssp             SSCCCEEEEETCTT-CHHHHHHHH-TTCEEEEEESCHHHHHHHHHHHHHTTCCCEEEESCGGGC-CCCSCEEEEEECSSG
T ss_pred             CCCCCEEEEeCCCC-Cccchhhcc-cceEEEEEeeccccccccccccccccccchheehhhhhc-ccccccchHhhhhhh
Confidence            46778899999975 777777776 588999999988665444332   233211212221111 123479998865332


Q ss_pred             c---------ccHHHHHhccccCCEEEE
Q 018067          258 V---------HPLMPLIGLLKSQGKLVL  276 (361)
Q Consensus       258 ~---------~~~~~~~~~l~~~G~~v~  276 (361)
                      -         ..+..+.++|+|||.++.
T Consensus       116 ~~~~~~~~~~~~L~~~~~~LkpgG~lii  143 (251)
T d1wzna1         116 IMYFDEEDLRKLFSKVAEALKPGGVFIT  143 (251)
T ss_dssp             GGGSCHHHHHHHHHHHHHHEEEEEEEEE
T ss_pred             hhcCChHHHHHHHHHHHHHcCCCcEEEE
Confidence            1         246678999999999876

>d1sc6a1 c.2.1.4 (A:108-295) Phosphoglycerate dehydrogenase {Escherichia coli [TaxId: 562]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Formate/glycerate dehydrogenases, NAD-domain
domain: Phosphoglycerate dehydrogenase
species: Escherichia coli [TaxId: 562]

Probab=93.00  E-value=0.14  Score=40.09  Aligned_cols=86  Identities=17%  Similarity=0.182  Sum_probs=58.8

Q ss_pred             CCCEEEEEcCChHHHHHHHHHHHcCCeEEEEeCCchhHHHHHHHcCCCEEecCCCHHHHHHhcCCccEEEEcCCCc----
Q 018067          183 PGMHVGVVGLGGLGHVAVKFAKAMGVKVTVISTSPSKKSEAIERLGADSFLVSRDQDEMQAAMGTMDGIIDTVSAV----  258 (361)
Q Consensus       183 ~g~~vlV~Gag~vG~~a~~la~~~g~~vi~~~~~~~~~~~~~~~~g~~~vv~~~~~~~~~~~~~g~d~vid~~g~~----  258 (361)
                      .+.+|.|+|.|.+|...+++++.+|++|+..++......     ...   ....   .+.++....|+++-+..-.    
T Consensus        43 ~~~~vgiiG~G~IG~~va~~l~~fg~~v~~~d~~~~~~~-----~~~---~~~~---~l~ell~~sDii~i~~plt~~T~  111 (188)
T d1sc6a1          43 RGKKLGIIGYGHIGTQLGILAESLGMYVYFYDIENKLPL-----GNA---TQVQ---HLSDLLNMSDVVSLHVPENPSTK  111 (188)
T ss_dssp             TTCEEEEECCSHHHHHHHHHHHHTTCEEEEECSSCCCCC-----TTC---EECS---CHHHHHHHCSEEEECCCSSTTTT
T ss_pred             cceEEEEeecccchhhhhhhcccccceEeeccccccchh-----hhh---hhhh---hHHHHHhhccceeecccCCcchh
Confidence            578999999999999999999999999999987543210     011   1111   1233334578887765531    


Q ss_pred             -ccHHHHHhccccCCEEEEecC
Q 018067          259 -HPLMPLIGLLKSQGKLVLVGA  279 (361)
Q Consensus       259 -~~~~~~~~~l~~~G~~v~~g~  279 (361)
                       ..-...++.++++..+|.++.
T Consensus       112 ~li~~~~l~~mk~~a~lIN~aR  133 (188)
T d1sc6a1         112 NMMGAKEISLMKPGSLLINASR  133 (188)
T ss_dssp             TCBCHHHHHHSCTTEEEEECSC
T ss_pred             hhccHHHHhhCCCCCEEEEcCc
Confidence             112467788888888888865

>d1qyca_ c.2.1.2 (A:) Phenylcoumaran benzylic ether reductase {Loblolly pine (Pinus taeda) [TaxId: 3352]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Tyrosine-dependent oxidoreductases
domain: Phenylcoumaran benzylic ether reductase
species: Loblolly pine (Pinus taeda) [TaxId: 3352]

Probab=92.97  E-value=0.14  Score=42.54  Aligned_cols=74  Identities=18%  Similarity=0.250  Sum_probs=49.7

Q ss_pred             CEEEEEcC-ChHHHHHHHHHHHcCCeEEEEeCCchhH------HHHH--HHcCCCEEe-cCCCHHHHHHhcCCccEEEEc
Q 018067          185 MHVGVVGL-GGLGHVAVKFAKAMGVKVTVISTSPSKK------SEAI--ERLGADSFL-VSRDQDEMQAAMGTMDGIIDT  254 (361)
Q Consensus       185 ~~vlV~Ga-g~vG~~a~~la~~~g~~vi~~~~~~~~~------~~~~--~~~g~~~vv-~~~~~~~~~~~~~g~d~vid~  254 (361)
                      ++|||+|+ |-+|..++..+...|.+|+++++.....      ..+.  ...+++.+. |..+.+.......+.+.++.+
T Consensus         4 kKILVtGatG~iG~~l~~~L~~~G~~V~~l~R~~~~~~~~~~~~~~~~~~~~~~~~~~~d~~~~~~~~~~~~~~~~vi~~   83 (307)
T d1qyca_           4 SRILLIGATGYIGRHVAKASLDLGHPTFLLVRESTASSNSEKAQLLESFKASGANIVHGSIDDHASLVEAVKNVDVVIST   83 (307)
T ss_dssp             CCEEEESTTSTTHHHHHHHHHHTTCCEEEECCCCCTTTTHHHHHHHHHHHTTTCEEECCCTTCHHHHHHHHHTCSEEEEC
T ss_pred             CEEEEECCCcHHHHHHHHHHHHCCCeEEEEECCCccccchhHHHHHHhhccCCcEEEEeecccchhhhhhhhhceeeeec
Confidence            57999998 9999999999999999999999865321      1111  122333221 334445555555678888888


Q ss_pred             CCCc
Q 018067          255 VSAV  258 (361)
Q Consensus       255 ~g~~  258 (361)
                      .+..
T Consensus        84 ~~~~   87 (307)
T d1qyca_          84 VGSL   87 (307)
T ss_dssp             CCGG
T ss_pred             cccc
Confidence            8753

>d1n1ea2 c.2.1.6 (A:9-197) Glycerol-3- phosphate dehydrogenase {Trypanosome (Leishmania mexicana) [TaxId: 5665]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: 6-phosphogluconate dehydrogenase-like, N-terminal domain
domain: Glycerol-3- phosphate dehydrogenase
species: Trypanosome (Leishmania mexicana) [TaxId: 5665]

Probab=92.95  E-value=0.046  Score=43.12  Aligned_cols=83  Identities=12%  Similarity=0.115  Sum_probs=56.1

Q ss_pred             CEEEEEcCChHHHHHHHHHHHcCCeEEEEeCCchhHHHHHHHcCCCEE-----ecCCC---HHHHHHhcCCccEEEEcCC
Q 018067          185 MHVGVVGLGGLGHVAVKFAKAMGVKVTVISTSPSKKSEAIERLGADSF-----LVSRD---QDEMQAAMGTMDGIIDTVS  256 (361)
Q Consensus       185 ~~vlV~Gag~vG~~a~~la~~~g~~vi~~~~~~~~~~~~~~~~g~~~v-----v~~~~---~~~~~~~~~g~d~vid~~g  256 (361)
                      .+|.|+|+|..|.+.+.++-..|-+|++.+++++....+.+. +-+..     --+.+   ...+.++..+.|++|-++.
T Consensus         8 ~KI~ViGaG~wGtAlA~~La~~g~~V~l~~r~~~~~~~i~~~-~~n~~yl~~~~l~~~i~~t~~l~~a~~~ad~iiiavP   86 (189)
T d1n1ea2           8 NKAVVFGSGAFGTALAMVLSKKCREVCVWHMNEEEVRLVNEK-RENVLFLKGVQLASNITFTSDVEKAYNGAEIILFVIP   86 (189)
T ss_dssp             EEEEEECCSHHHHHHHHHHHTTEEEEEEECSCHHHHHHHHHH-TBCTTTSTTCBCCTTEEEESCHHHHHTTCSCEEECSC
T ss_pred             ceEEEECCCHHHHHHHHHHHHcCCeEEEEEecHHHHHHHhhc-ccccccccccccccccccchhhhhccCCCCEEEEcCc
Confidence            369999999999999999988888999999988777666432 21100     00000   1123445567899999998


Q ss_pred             CcccHHHHHhccc
Q 018067          257 AVHPLMPLIGLLK  269 (361)
Q Consensus       257 ~~~~~~~~~~~l~  269 (361)
                      ... +...++.++
T Consensus        87 s~~-~~~~~~~~~   98 (189)
T d1n1ea2          87 TQF-LRGFFEKSG   98 (189)
T ss_dssp             HHH-HHHHHHHHC
T ss_pred             HHH-HHHHHHHHH
Confidence            765 666655443

>d1obfo1 c.2.1.3 (O:1-152,O:315-335) Glyceraldehyde-3-phosphate dehydrogenase (GAPDH) {Achromobacter xylosoxidans [TaxId: 85698]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Glyceraldehyde-3-phosphate dehydrogenase-like, N-terminal domain
domain: Glyceraldehyde-3-phosphate dehydrogenase (GAPDH)
species: Achromobacter xylosoxidans [TaxId: 85698]

Probab=92.87  E-value=0.15  Score=39.40  Aligned_cols=95  Identities=13%  Similarity=0.165  Sum_probs=60.7

Q ss_pred             EEEEEcCChHHHHHHHHHHHc----CCeEEEEeCCchhHHHHHHHc---------CCC---------------EEecCCC
Q 018067          186 HVGVVGLGGLGHVAVKFAKAM----GVKVTVISTSPSKKSEAIERL---------GAD---------------SFLVSRD  237 (361)
Q Consensus       186 ~vlV~Gag~vG~~a~~la~~~----g~~vi~~~~~~~~~~~~~~~~---------g~~---------------~vv~~~~  237 (361)
                      +|.|.|-|-+|.++...+-..    ..+|+.+.+.. ..+.++.-+         ...               .++..++
T Consensus         3 kigINGfGRIGR~v~R~~~~~~~~~~~~vvaINd~~-~~~~~ayLlkyDS~hG~~~~~v~~~~~~l~i~g~~i~i~~~~~   81 (173)
T d1obfo1           3 RVAINGYGRIGRNILRAHYEGGKSHDIEIVAINDLG-DPKTNAHLTRYDTAHGKFPGTVSVNGSYMVVNGDKIRVDANRN   81 (173)
T ss_dssp             EEEEECCSHHHHHHHHHHHHTTSCSSEEEEEEECSS-CHHHHHHHHHEETTTEECSSCEEEETTEEEETTEEEEEECCSC
T ss_pred             EEEEECCcHHHHHHHHHHHhCCCCCCeEEEEEcCCC-ChHHHHHhhcccccCCCcCceEEeccceEEECCEEEEEEecCC
Confidence            578999999999998876543    34676666532 222222211         100               1222233


Q ss_pred             HHHHHHhcCCccEEEEcCCCcccHHHHHhccccCCEEEEecCCC
Q 018067          238 QDEMQAAMGTMDGIIDTVSAVHPLMPLIGLLKSQGKLVLVGAPE  281 (361)
Q Consensus       238 ~~~~~~~~~g~d~vid~~g~~~~~~~~~~~l~~~G~~v~~g~~~  281 (361)
                      ++.+.+..-++|+|+||+|.-.....+...|..+-+-|.+..+.
T Consensus        82 p~~i~W~~~gvDiViEcTG~f~~~~~a~~hl~~GakkViiSAP~  125 (173)
T d1obfo1          82 PAQLPWGALKVDVVLECTGFFTTKEKAGAHIKGGAKKVIISAPG  125 (173)
T ss_dssp             GGGSCTTTTTCSEEEECSSSCCSHHHHHHHHHHTCSEEEESSCC
T ss_pred             HHHCcccccccceEEEecccccCHHHHHHHhccCCcceEEecCC
Confidence            34444444589999999998776788889998887777776654

>d2i76a2 c.2.1.6 (A:2-154) Hypothetical protein TM1727 {Thermotoga maritima [TaxId: 2336]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: 6-phosphogluconate dehydrogenase-like, N-terminal domain
domain: Hypothetical protein TM1727
species: Thermotoga maritima [TaxId: 2336]

Probab=92.85  E-value=0.024  Score=42.94  Aligned_cols=83  Identities=16%  Similarity=0.086  Sum_probs=53.1

Q ss_pred             EEcCChHHHHHHHHHHHcCCeEEEEeCCchhHHHHHHHcCCCEEecCCCHHHHHHhcCCccEEEEcCCCcccHHHHHhcc
Q 018067          189 VVGLGGLGHVAVKFAKAMGVKVTVISTSPSKKSEAIERLGADSFLVSRDQDEMQAAMGTMDGIIDTVSAVHPLMPLIGLL  268 (361)
Q Consensus       189 V~Gag~vG~~a~~la~~~g~~vi~~~~~~~~~~~~~~~~g~~~vv~~~~~~~~~~~~~g~d~vid~~g~~~~~~~~~~~l  268 (361)
                      ++|+|.+|...+..++..+..+.+..|+.++.+.+++..+... .+.      .+.....|+||-|+.... +...+..+
T Consensus         4 fIG~G~mg~~l~~~L~~~~~~~~v~~R~~~~~~~l~~~~~~~~-~~~------~~~~~~~DiVil~v~d~~-i~~v~~~l   75 (153)
T d2i76a2           4 FVGTGTLTRFFLECLKDRYEIGYILSRSIDRARNLAEVYGGKA-ATL------EKHPELNGVVFVIVPDRY-IKTVANHL   75 (153)
T ss_dssp             EESCCHHHHHHHHTTC----CCCEECSSHHHHHHHHHHTCCCC-CSS------CCCCC---CEEECSCTTT-HHHHHTTT
T ss_pred             EEeCcHHHHHHHHHHHhCCCEEEEEeCChhhhcchhhcccccc-cch------hhhhccCcEEEEeccchh-hhHHHhhh
Confidence            5799999999888776544344578899999888877766432 111      123346899999998776 77778877


Q ss_pred             cc-CCEEEEecC
Q 018067          269 KS-QGKLVLVGA  279 (361)
Q Consensus       269 ~~-~G~~v~~g~  279 (361)
                      +. +..++.+..
T Consensus        76 ~~~~~ivi~~s~   87 (153)
T d2i76a2          76 NLGDAVLVHCSG   87 (153)
T ss_dssp             CCSSCCEEECCS
T ss_pred             cccceeeeeccc
Confidence            64 444455543

>d1v9la1 c.2.1.7 (A:180-421) Glutamate dehydrogenase {Pyrobaculum islandicum [TaxId: 2277]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Aminoacid dehydrogenase-like, C-terminal domain
domain: Glutamate dehydrogenase
species: Pyrobaculum islandicum [TaxId: 2277]

Probab=92.83  E-value=0.089  Score=43.12  Aligned_cols=35  Identities=29%  Similarity=0.506  Sum_probs=32.4

Q ss_pred             CCCCEEEEEcCChHHHHHHHHHHHcCCeEEEEeCC
Q 018067          182 KPGMHVGVVGLGGLGHVAVKFAKAMGVKVTVISTS  216 (361)
Q Consensus       182 ~~g~~vlV~Gag~vG~~a~~la~~~g~~vi~~~~~  216 (361)
                      -.|.+|+|.|.|.+|..+++++...|++|+.+.+.
T Consensus        29 l~g~~v~IqGfGnVG~~~a~~L~~~Gakvv~vsD~   63 (242)
T d1v9la1          29 IEGKTVAIQGMGNVGRWTAYWLEKMGAKVIAVSDI   63 (242)
T ss_dssp             CTTCEEEEECCSHHHHHHHHHHHTTTCEEEEEECS
T ss_pred             CCCCEEEEECCCHHHHHHHHHHHHcCCeEEEeecc
Confidence            47999999999999999999999999999988765

>d1dxya1 c.2.1.4 (A:101-299) D-2-hydroxyisocaproate dehydrogenase {Lactobacillus casei [TaxId: 1582]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Formate/glycerate dehydrogenases, NAD-domain
domain: D-2-hydroxyisocaproate dehydrogenase
species: Lactobacillus casei [TaxId: 1582]

Probab=92.83  E-value=0.059  Score=42.83  Aligned_cols=86  Identities=23%  Similarity=0.270  Sum_probs=58.5

Q ss_pred             CCCEEEEEcCChHHHHHHHHHHHcCCeEEEEeCCchhHHHHHHHcCCCEEecCCCHHHHHHhcCCccEEEEcCCCc-c--
Q 018067          183 PGMHVGVVGLGGLGHVAVKFAKAMGVKVTVISTSPSKKSEAIERLGADSFLVSRDQDEMQAAMGTMDGIIDTVSAV-H--  259 (361)
Q Consensus       183 ~g~~vlV~Gag~vG~~a~~la~~~g~~vi~~~~~~~~~~~~~~~~g~~~vv~~~~~~~~~~~~~g~d~vid~~g~~-~--  259 (361)
                      .|++|.|+|.|.||..++++++.+|++|++.++...+..    ....    ...+   +.++....|++.-++... .  
T Consensus        44 ~~ktvgIiG~G~IG~~va~~l~~fg~~v~~~d~~~~~~~----~~~~----~~~~---l~~l~~~~D~v~~~~plt~~T~  112 (199)
T d1dxya1          44 GQQTVGVMGTGHIGQVAIKLFKGFGAKVIAYDPYPMKGD----HPDF----DYVS---LEDLFKQSDVIDLHVPGIEQNT  112 (199)
T ss_dssp             GGSEEEEECCSHHHHHHHHHHHHTTCEEEEECSSCCSSC----CTTC----EECC---HHHHHHHCSEEEECCCCCGGGT
T ss_pred             cceeeeeeecccccccccccccccceeeeccCCccchhh----hcch----hHHH---HHHHHHhcccceeeeccccccc
Confidence            578999999999999999999999999999987643210    0011    1112   223333478887665432 1  


Q ss_pred             --cHHHHHhccccCCEEEEecC
Q 018067          260 --PLMPLIGLLKSQGKLVLVGA  279 (361)
Q Consensus       260 --~~~~~~~~l~~~G~~v~~g~  279 (361)
                        .-...++.|+++..+|.++.
T Consensus       113 ~li~~~~l~~mk~~a~lIN~aR  134 (199)
T d1dxya1         113 HIINEAAFNLMKPGAIVINTAR  134 (199)
T ss_dssp             TSBCHHHHHHSCTTEEEEECSC
T ss_pred             ccccHHHhhccCCceEEEeccc
Confidence              12357788888888888875

>d1mv8a2 c.2.1.6 (A:1-202) GDP-mannose 6-dehydrogenase {Pseudomonas aeruginosa [TaxId: 287]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: 6-phosphogluconate dehydrogenase-like, N-terminal domain
domain: GDP-mannose 6-dehydrogenase
species: Pseudomonas aeruginosa [TaxId: 287]

Probab=92.82  E-value=0.14  Score=40.61  Aligned_cols=71  Identities=21%  Similarity=0.208  Sum_probs=49.0

Q ss_pred             EEEEEcCChHHHHHHHHHHHcCCeEEEEeCCchhHHHHHHHcCCCEEecCCCHHHHH---------------HhcCCccE
Q 018067          186 HVGVVGLGGLGHVAVKFAKAMGVKVTVISTSPSKKSEAIERLGADSFLVSRDQDEMQ---------------AAMGTMDG  250 (361)
Q Consensus       186 ~vlV~Gag~vG~~a~~la~~~g~~vi~~~~~~~~~~~~~~~~g~~~vv~~~~~~~~~---------------~~~~g~d~  250 (361)
                      +|.|+|+|-+|+..+..+...|.+|++++.++++...+.+  |-.........+.+.               +.....|+
T Consensus         2 kI~ViGlG~vGl~~a~~la~~g~~V~g~D~n~~~i~~ln~--g~~p~~e~~~~~~l~~~~~~~~~~~~~~~~~~i~~~d~   79 (202)
T d1mv8a2           2 RISIFGLGYVGAVCAGCLSARGHEVIGVDVSSTKIDLINQ--GKSPIVEPGLEALLQQGRQTGRLSGTTDFKKAVLDSDV   79 (202)
T ss_dssp             EEEEECCSTTHHHHHHHHHHTTCEEEEECSCHHHHHHHHT--TCCSSCCTTHHHHHHHHHHTTCEEEESCHHHHHHTCSE
T ss_pred             EEEEECCCHhHHHHHHHHHhCCCcEEEEeCCHHHHHHhcc--cCCcccchhhhhhhhhhhcccccccCCCHHHHHhhCCE
Confidence            5889999999999999998999999999998877766632  322222222222221               11125899


Q ss_pred             EEEcCCCc
Q 018067          251 IIDTVSAV  258 (361)
Q Consensus       251 vid~~g~~  258 (361)
                      +|-|++.+
T Consensus        80 i~i~VpTP   87 (202)
T d1mv8a2          80 SFICVGTP   87 (202)
T ss_dssp             EEECCCCC
T ss_pred             EEEecCcc
Confidence            99999875

>d1j6ua1 c.5.1.1 (A:0-88) UDP-N-acetylmuramate-alanine ligase MurC {Thermotoga maritima [TaxId: 2336]}

class: Alpha and beta proteins (a/b)
fold: MurCD N-terminal domain
superfamily: MurCD N-terminal domain
family: MurCD N-terminal domain
domain: UDP-N-acetylmuramate-alanine ligase MurC
species: Thermotoga maritima [TaxId: 2336]

Probab=92.82  E-value=0.42  Score=32.21  Aligned_cols=67  Identities=22%  Similarity=0.343  Sum_probs=46.2

Q ss_pred             EEEEEcCChHHHHH-HHHHHHcCCeEEEEeCCchhHHHHHHHcCCCEEecCCCHHHHHHhcCCccEEEEcCCC
Q 018067          186 HVGVVGLGGLGHVA-VKFAKAMGVKVTVISTSPSKKSEAIERLGADSFLVSRDQDEMQAAMGTMDGIIDTVSA  257 (361)
Q Consensus       186 ~vlV~Gag~vG~~a-~~la~~~g~~vi~~~~~~~~~~~~~~~~g~~~vv~~~~~~~~~~~~~g~d~vid~~g~  257 (361)
                      +|-++|-|++|..+ +++++..|+.|...+..+.......++.|+.... .++++.+    .++|.|+-+.+-
T Consensus         3 ~ihfiGIgG~GMs~LA~~L~~~G~~VsGSD~~~~~~t~~L~~~Gi~i~~-gh~~~~i----~~~d~vV~SsAI   70 (89)
T d1j6ua1           3 KIHFVGIGGIGMSAVALHEFSNGNDVYGSNIEETERTAYLRKLGIPIFV-PHSADNW----YDPDLVIKTPAV   70 (89)
T ss_dssp             EEEEETTTSHHHHHHHHHHHHTTCEEEEECSSCCHHHHHHHHTTCCEES-SCCTTSC----CCCSEEEECTTC
T ss_pred             EEEEEeECHHHHHHHHHHHHhCCCeEEEEeCCCChhHHHHHHCCCeEEe-eeccccc----CCCCEEEEecCc
Confidence            57778888888754 6888999999999998875544445888986432 2333322    357888766553

>d1k0ia1 c.3.1.2 (A:1-173,A:276-394) p-Hydroxybenzoate hydroxylase, PHBH {Pseudomonas aeruginosa [TaxId: 287]}

class: Alpha and beta proteins (a/b)
fold: FAD/NAD(P)-binding domain
superfamily: FAD/NAD(P)-binding domain
family: FAD-linked reductases, N-terminal domain
domain: p-Hydroxybenzoate hydroxylase, PHBH
species: Pseudomonas aeruginosa [TaxId: 287]

Probab=92.76  E-value=0.046  Score=45.85  Aligned_cols=32  Identities=16%  Similarity=0.393  Sum_probs=29.7

Q ss_pred             EEEEEcCChHHHHHHHHHHHcCCeEEEEeCCc
Q 018067          186 HVGVVGLGGLGHVAVKFAKAMGVKVTVISTSP  217 (361)
Q Consensus       186 ~vlV~Gag~vG~~a~~la~~~g~~vi~~~~~~  217 (361)
                      .|+|+|+|+.|++++..++..|.+|.++.+.+
T Consensus         4 ~V~IvGaGp~Gl~~A~~L~~~G~~v~vlE~~~   35 (292)
T d1k0ia1           4 QVAIIGAGPSGLLLGQLLHKAGIDNVILERQT   35 (292)
T ss_dssp             SEEEECCSHHHHHHHHHHHHHTCCEEEECSSC
T ss_pred             CEEEECcCHHHHHHHHHHHHCCCCEEEEeCCC
Confidence            49999999999999999999999999998765

>d1uaya_ c.2.1.2 (A:) Type II 3-hydroxyacyl-CoA dehydrogenase {Thermus thermophilus [TaxId: 274]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Tyrosine-dependent oxidoreductases
domain: Type II 3-hydroxyacyl-CoA dehydrogenase
species: Thermus thermophilus [TaxId: 274]

Probab=92.72  E-value=0.061  Score=43.75  Aligned_cols=35  Identities=31%  Similarity=0.321  Sum_probs=31.2

Q ss_pred             CEEEEEcC-ChHHHHHHHHHHHcCCeEEEEeCCchh
Q 018067          185 MHVGVVGL-GGLGHVAVKFAKAMGVKVTVISTSPSK  219 (361)
Q Consensus       185 ~~vlV~Ga-g~vG~~a~~la~~~g~~vi~~~~~~~~  219 (361)
                      +++||.|+ +++|.++++.+...|++|++++++++.
T Consensus         2 K~alITGas~GIG~aiA~~la~~Ga~V~i~~~~~~~   37 (241)
T d1uaya_           2 RSALVTGGASGLGRAAALALKARGYRVVVLDLRREG   37 (241)
T ss_dssp             CEEEEETTTSHHHHHHHHHHHHHTCEEEEEESSCCS
T ss_pred             CEEEEeCCCCHHHHHHHHHHHHCCCEEEEEECCccc
Confidence            57888997 999999999999999999999987654

>d2fyta1 c.66.1.6 (A:238-548) Protein arginine N-methyltransferase 3, PRMT3 {Human (Homo sapiens) [TaxId: 9606]}

class: Alpha and beta proteins (a/b)
fold: S-adenosyl-L-methionine-dependent methyltransferases
superfamily: S-adenosyl-L-methionine-dependent methyltransferases
family: Arginine methyltransferase
domain: Protein arginine N-methyltransferase 3, PRMT3
species: Human (Homo sapiens) [TaxId: 9606]

Probab=92.65  E-value=0.081  Score=45.09  Aligned_cols=98  Identities=19%  Similarity=0.155  Sum_probs=53.9

Q ss_pred             hhhcCCCCCCCEEEEEcCChHHHHHHHHHHHcCC-eEEEEeCCchhHH--HHHHHcCCC---EEecCCCHHHHHHhcCCc
Q 018067          175 LRFYGLDKPGMHVGVVGLGGLGHVAVKFAKAMGV-KVTVISTSPSKKS--EAIERLGAD---SFLVSRDQDEMQAAMGTM  248 (361)
Q Consensus       175 l~~~~~~~~g~~vlV~Gag~vG~~a~~la~~~g~-~vi~~~~~~~~~~--~~~~~~g~~---~vv~~~~~~~~~~~~~g~  248 (361)
                      +.+...+.+|++||-+|+| .|.+++.+|++ |+ +|++++.++.-..  ...++.+..   .++..+. ..+......+
T Consensus        27 i~~~~~~~~~~~VLDiGcG-~G~lsl~aa~~-Ga~~V~aid~s~~~~~a~~~~~~~~~~~~i~~~~~~~-~~l~~~~~~~  103 (311)
T d2fyta1          27 IYQNPHIFKDKVVLDVGCG-TGILSMFAAKA-GAKKVLGVDQSEILYQAMDIIRLNKLEDTITLIKGKI-EEVHLPVEKV  103 (311)
T ss_dssp             HHHCGGGTTTCEEEEETCT-TSHHHHHHHHT-TCSEEEEEESSTHHHHHHHHHHHTTCTTTEEEEESCT-TTSCCSCSCE
T ss_pred             HHhccccCCcCEEEEECCC-CCHHHHHHHHc-CCCEEEEEeCHHHHHHHHHHHHHhCCCccceEEEeeH-HHhcCccccc
Confidence            4444445789999999987 46666666665 66 8999887764321  222333421   2222111 1111112479


Q ss_pred             cEEEEc-CCC----cc---cHH-HHHhccccCCEEE
Q 018067          249 DGIIDT-VSA----VH---PLM-PLIGLLKSQGKLV  275 (361)
Q Consensus       249 d~vid~-~g~----~~---~~~-~~~~~l~~~G~~v  275 (361)
                      |+|+-. .+.    +.   .+. ..-+.|+|+|+++
T Consensus       104 D~Ivse~~~~~~~~e~~~~~~~~a~~~~Lkp~G~ii  139 (311)
T d2fyta1         104 DVIISEWMGYFLLFESMLDSVLYAKNKYLAKGGSVY  139 (311)
T ss_dssp             EEEEECCCBTTBTTTCHHHHHHHHHHHHEEEEEEEE
T ss_pred             eEEEEeeeeeecccccccHHHHHHHHhcCCCCcEEe
Confidence            999752 221    11   122 2345789999886

>d2dw4a2 c.3.1.2 (A:274-654,A:764-831) Lysine-specific histone demethylase 1, LSD1 {Human (Homo sapiens) [TaxId: 9606]}

class: Alpha and beta proteins (a/b)
fold: FAD/NAD(P)-binding domain
superfamily: FAD/NAD(P)-binding domain
family: FAD-linked reductases, N-terminal domain
domain: Lysine-specific histone demethylase 1, LSD1
species: Human (Homo sapiens) [TaxId: 9606]

Probab=92.54  E-value=0.075  Score=45.06  Aligned_cols=35  Identities=26%  Similarity=0.378  Sum_probs=31.0

Q ss_pred             CCCCEEEEEcCChHHHHHHHHHHHcCCeEEEEeCC
Q 018067          182 KPGMHVGVVGLGGLGHVAVKFAKAMGVKVTVISTS  216 (361)
Q Consensus       182 ~~g~~vlV~Gag~vG~~a~~la~~~g~~vi~~~~~  216 (361)
                      ++..+|+|+|+|..|+.++..+...|.+|.++...
T Consensus         3 ~~~~kViVIGaG~aGL~aA~~L~~~G~~V~VlEa~   37 (449)
T d2dw4a2           3 KKTGKVIIIGSGVSGLAAARQLQSFGMDVTLLEAR   37 (449)
T ss_dssp             SCCCEEEEECCBHHHHHHHHHHHHTTCEEEEECSS
T ss_pred             CCCCcEEEECCCHHHHHHHHHHHhCCCCEEEEeCC
Confidence            45677999999999999999999999999988654

>d1z45a2 c.2.1.2 (A:11-357) Uridine diphosphogalactose-4-epimerase (UDP-galactose 4-epimerase) {Baker's yeast (Saccharomyces cerevisiae) [TaxId: 4932]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Tyrosine-dependent oxidoreductases
domain: Uridine diphosphogalactose-4-epimerase (UDP-galactose 4-epimerase)
species: Baker's yeast (Saccharomyces cerevisiae) [TaxId: 4932]

Probab=92.35  E-value=0.18  Score=43.29  Aligned_cols=73  Identities=15%  Similarity=0.069  Sum_probs=47.9

Q ss_pred             CEEEEEcC-ChHHHHHHHHHHHcCCeEEEEeCCc----hhHHHHH--HHcCCC-EEecCCCHHHHHHhc--CCccEEEEc
Q 018067          185 MHVGVVGL-GGLGHVAVKFAKAMGVKVTVISTSP----SKKSEAI--ERLGAD-SFLVSRDQDEMQAAM--GTMDGIIDT  254 (361)
Q Consensus       185 ~~vlV~Ga-g~vG~~a~~la~~~g~~vi~~~~~~----~~~~~~~--~~~g~~-~vv~~~~~~~~~~~~--~g~d~vid~  254 (361)
                      +.|||+|+ |-+|...+..+...|.+|+++++..    +......  ..-+.. ...|-.+.+.+..+.  .++|+||.+
T Consensus         2 K~ILVTGatGfIG~~lv~~Ll~~g~~V~~~d~~~~~~~~~~~~~~~~~~~~v~~~~~Dl~d~~~l~~~~~~~~~d~Vihl   81 (347)
T d1z45a2           2 KIVLVTGGAGYIGSHTVVELIENGYDCVVADNLSNSTYDSVARLEVLTKHHIPFYEVDLCDRKGLEKVFKEYKIDSVIHF   81 (347)
T ss_dssp             CEEEEETTTSHHHHHHHHHHHHTTCEEEEEECCSSCCTHHHHHHHHHHTSCCCEEECCTTCHHHHHHHHHHSCCCEEEEC
T ss_pred             CEEEEeCCCcHHHHHHHHHHHHCcCeEEEEECCCCcchhHHHhHHhhcccCCeEEEeecCCHHHHHHHHhccCCCEEEEc
Confidence            56899998 9999999999988999999986422    1111111  111233 223455666555543  389999999


Q ss_pred             CCC
Q 018067          255 VSA  257 (361)
Q Consensus       255 ~g~  257 (361)
                      ++.
T Consensus        82 Aa~   84 (347)
T d1z45a2          82 AGL   84 (347)
T ss_dssp             CSC
T ss_pred             ccc
Confidence            875

>d1txga2 c.2.1.6 (A:1-180) Glycerol-3- phosphate dehydrogenase {Archaeoglobus fulgidus [TaxId: 2234]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: 6-phosphogluconate dehydrogenase-like, N-terminal domain
domain: Glycerol-3- phosphate dehydrogenase
species: Archaeoglobus fulgidus [TaxId: 2234]

Probab=92.34  E-value=0.24  Score=38.29  Aligned_cols=82  Identities=13%  Similarity=0.150  Sum_probs=52.4

Q ss_pred             EEEEEcCChHHHHHHHHHHHcCCeEEEEeCCchh--HHHHHHHcCCCEE----ecC---CCHHHHHHhcCCccEEEEcCC
Q 018067          186 HVGVVGLGGLGHVAVKFAKAMGVKVTVISTSPSK--KSEAIERLGADSF----LVS---RDQDEMQAAMGTMDGIIDTVS  256 (361)
Q Consensus       186 ~vlV~Gag~vG~~a~~la~~~g~~vi~~~~~~~~--~~~~~~~~g~~~v----v~~---~~~~~~~~~~~g~d~vid~~g  256 (361)
                      +|.|+|+|..|.+.+..+-..|.+|++..+..+.  .+.+ .+-.-...    +..   ...+...+.....|++|.++.
T Consensus         2 kI~ViGaG~~GtalA~~la~~g~~V~l~~r~~~~~~~~~i-~~~~~~~~~~~~~~~~~i~~~~~~~~~~~~ad~Ii~avp   80 (180)
T d1txga2           2 IVSILGAGAMGSALSVPLVDNGNEVRIWGTEFDTEILKSI-SAGREHPRLGVKLNGVEIFWPEQLEKCLENAEVVLLGVS   80 (180)
T ss_dssp             EEEEESCCHHHHHHHHHHHHHCCEEEEECCGGGHHHHHHH-HTTCCBTTTTBCCCSEEEECGGGHHHHHTTCSEEEECSC
T ss_pred             EEEEECCCHHHHHHHHHHHHCCCEEEEEEecccHHHHHHH-hhhhhhhhhcchhccccccccccHHHHHhccchhhcccc
Confidence            5889999999999999998889999998875432  2222 11111000    000   012334555668999999999


Q ss_pred             CcccHHHHHhccc
Q 018067          257 AVHPLMPLIGLLK  269 (361)
Q Consensus       257 ~~~~~~~~~~~l~  269 (361)
                      ... +...++.+.
T Consensus        81 s~~-~~~~~~~l~   92 (180)
T d1txga2          81 TDG-VLPVMSRIL   92 (180)
T ss_dssp             GGG-HHHHHHHHT
T ss_pred             hhh-hHHHHHhhc
Confidence            866 666665443

>d1mlda1 c.2.1.5 (A:1-144) Malate dehydrogenase {Pig (Sus scrofa) [TaxId: 9823]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: LDH N-terminal domain-like
domain: Malate dehydrogenase
species: Pig (Sus scrofa) [TaxId: 9823]

Probab=92.34  E-value=0.37  Score=35.78  Aligned_cols=71  Identities=15%  Similarity=0.240  Sum_probs=44.9

Q ss_pred             CEEEEEcC-ChHHHHHHHHHHHcCC--eEEEEeCCchhHHHHHHHcC-CCEEe---cCCCHHHHHHhcCCccEEEEcCCC
Q 018067          185 MHVGVVGL-GGLGHVAVKFAKAMGV--KVTVISTSPSKKSEAIERLG-ADSFL---VSRDQDEMQAAMGTMDGIIDTVSA  257 (361)
Q Consensus       185 ~~vlV~Ga-g~vG~~a~~la~~~g~--~vi~~~~~~~~~~~~~~~~g-~~~vv---~~~~~~~~~~~~~g~d~vid~~g~  257 (361)
                      ++|.|+|| |.+|..++.++...+.  +++.++..+.+.. . .++. +....   ..-......+...+.|+|+-++|.
T Consensus         1 sKv~IiGA~G~VG~~~A~~l~~~~~~~elvLiDi~~~~~~-a-~Dl~~~~~~~~~~~~~~~~~~~~~~~~aDivVitag~   78 (144)
T d1mlda1           1 AKVAVLGASGGIGQPLSLLLKNSPLVSRLTLYDIAHTPGV-A-ADLSHIETRATVKGYLGPEQLPDCLKGCDVVVIPAGV   78 (144)
T ss_dssp             CEEEEETTTSTTHHHHHHHHHTCTTCSEEEEEESSSHHHH-H-HHHTTSSSSCEEEEEESGGGHHHHHTTCSEEEECCSC
T ss_pred             CeEEEECCCChHHHHHHHHHHhCCccceEEEEeccccchh-h-HHHhhhhhhcCCCeEEcCCChHHHhCCCCEEEECCCc
Confidence            46899997 9999999999998876  6777777654322 2 2332 11100   001122333445689999988885

>d3c96a1 c.3.1.2 (A:4-182,A:294-402) Monooxygenase PhzS {Pseudomonas aeruginosa [TaxId: 287]}

class: Alpha and beta proteins (a/b)
fold: FAD/NAD(P)-binding domain
superfamily: FAD/NAD(P)-binding domain
family: FAD-linked reductases, N-terminal domain
domain: Monooxygenase PhzS
species: Pseudomonas aeruginosa [TaxId: 287]

Probab=92.34  E-value=0.076  Score=43.81  Aligned_cols=32  Identities=25%  Similarity=0.330  Sum_probs=28.4

Q ss_pred             EEEEEcCChHHHHHHHHHHHcCC-eEEEEeCCc
Q 018067          186 HVGVVGLGGLGHVAVKFAKAMGV-KVTVISTSP  217 (361)
Q Consensus       186 ~vlV~Gag~vG~~a~~la~~~g~-~vi~~~~~~  217 (361)
                      +|+|+|+|+.|++++.+++..|. +|.++.+.+
T Consensus         3 ~V~IvGaG~aGl~~A~~L~~~Gi~~V~V~Er~~   35 (288)
T d3c96a1           3 DILIAGAGIGGLSCALALHQAGIGKVTLLESSS   35 (288)
T ss_dssp             EEEEECCSHHHHHHHHHHHHTTCSEEEEEESSS
T ss_pred             EEEEECcCHHHHHHHHHHHhCCCCeEEEEeCCC
Confidence            59999999999999999999997 887877754

>d1ez4a1 c.2.1.5 (A:16-162) Lactate dehydrogenase {Lactobacillus pentosus [TaxId: 1589]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: LDH N-terminal domain-like
domain: Lactate dehydrogenase
species: Lactobacillus pentosus [TaxId: 1589]

Probab=92.31  E-value=0.046  Score=41.14  Aligned_cols=71  Identities=17%  Similarity=0.166  Sum_probs=45.7

Q ss_pred             CCEEEEEcCChHHHHHHHHHHHcCC--eEEEEeCCchhHHHHHHHcC------CCEEecCCCHHHHHHhcCCccEEEEcC
Q 018067          184 GMHVGVVGLGGLGHVAVKFAKAMGV--KVTVISTSPSKKSEAIERLG------ADSFLVSRDQDEMQAAMGTMDGIIDTV  255 (361)
Q Consensus       184 g~~vlV~Gag~vG~~a~~la~~~g~--~vi~~~~~~~~~~~~~~~~g------~~~vv~~~~~~~~~~~~~g~d~vid~~  255 (361)
                      ..+|.|+|+|.+|...+..+...|.  ++++++..+++.+..+.++.      ....+...+.    +...+.|+|+-++
T Consensus         5 ~~KI~IIGaG~VG~~~A~~l~~~~~~~elvL~D~~~~~~~g~a~Dl~~a~~~~~~~~~~~~d~----~~~~~adivvita   80 (146)
T d1ez4a1           5 HQKVVLVGDGAVGSSYAFAMAQQGIAEEFVIVDVVKDRTKGDALDLEDAQAFTAPKKIYSGEY----SDCKDADLVVITA   80 (146)
T ss_dssp             BCEEEEECCSHHHHHHHHHHHHHTCCSEEEEECSSHHHHHHHHHHHHGGGGGSCCCEEEECCG----GGGTTCSEEEECC
T ss_pred             CCEEEEECCCHHHHHHHHHHHhcCCCcEEEEeecccchhHHHHHHHhccccccCCceEeeccH----HHhccccEEEEec
Confidence            4589999999999999998888773  89888887765443333221      1111111221    1234789999888


Q ss_pred             CCc
Q 018067          256 SAV  258 (361)
Q Consensus       256 g~~  258 (361)
                      |.+
T Consensus        81 g~~   83 (146)
T d1ez4a1          81 GAP   83 (146)
T ss_dssp             CC-
T ss_pred             ccc
Confidence            864

>d1llda1 c.2.1.5 (A:7-149) Lactate dehydrogenase {Bifidobacterium longum, strain am101-2 [TaxId: 216816]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: LDH N-terminal domain-like
domain: Lactate dehydrogenase
species: Bifidobacterium longum, strain am101-2 [TaxId: 216816]

Probab=92.24  E-value=0.53  Score=34.81  Aligned_cols=70  Identities=16%  Similarity=0.198  Sum_probs=45.0

Q ss_pred             CEEEEEcCChHHHHHHHHHHHcCC--eEEEEeCCchhHHHHHHHcC-------CCEEecCCCHHHHHHhcCCccEEEEcC
Q 018067          185 MHVGVVGLGGLGHVAVKFAKAMGV--KVTVISTSPSKKSEAIERLG-------ADSFLVSRDQDEMQAAMGTMDGIIDTV  255 (361)
Q Consensus       185 ~~vlV~Gag~vG~~a~~la~~~g~--~vi~~~~~~~~~~~~~~~~g-------~~~vv~~~~~~~~~~~~~g~d~vid~~  255 (361)
                      .+|.|+|+|.+|..++..+...+.  ++++++..+++.+..+.++.       ...+....+.    +...+.|+|+-++
T Consensus         2 ~Ki~IIGaG~VG~~~a~~l~~~~l~~ElvL~D~~~~~~~g~a~Dl~~a~~~~~~~~i~~~~~~----~~~~daDvVVita   77 (143)
T d1llda1           2 TKLAVIGAGAVGSTLAFAAAQRGIAREIVLEDIAKERVEAEVLDMQHGSSFYPTVSIDGSDDP----EICRDADMVVITA   77 (143)
T ss_dssp             CEEEEECCSHHHHHHHHHHHHTTCCSEEEEECSSHHHHHHHHHHHHHTGGGSTTCEEEEESCG----GGGTTCSEEEECC
T ss_pred             CEEEEECCCHHHHHHHHHHHhcCCCcEEEEEEeccccchhHHHHHHhccccCCCceeecCCCH----HHhhCCcEEEEec
Confidence            468999999999999988888776  78888877765433222221       1222212221    2234689999988


Q ss_pred             CCc
Q 018067          256 SAV  258 (361)
Q Consensus       256 g~~  258 (361)
                      |.+
T Consensus        78 G~~   80 (143)
T d1llda1          78 GPR   80 (143)
T ss_dssp             CCC
T ss_pred             ccc
Confidence            863

>d2blla1 c.2.1.2 (A:316-657) Polymyxin resistance protein ArnA (PrmI) {Escherichia coli [TaxId: 562]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Tyrosine-dependent oxidoreductases
domain: Polymyxin resistance protein ArnA (PrmI)
species: Escherichia coli [TaxId: 562]

Probab=92.23  E-value=0.079  Score=45.50  Aligned_cols=72  Identities=11%  Similarity=0.035  Sum_probs=46.8

Q ss_pred             EEEEEcC-ChHHHHHHHHHHHcC-CeEEEEeCCchhHHHHHHHcCCCEEe-cCCC-HHHHHHhcCCccEEEEcCCC
Q 018067          186 HVGVVGL-GGLGHVAVKFAKAMG-VKVTVISTSPSKKSEAIERLGADSFL-VSRD-QDEMQAAMGTMDGIIDTVSA  257 (361)
Q Consensus       186 ~vlV~Ga-g~vG~~a~~la~~~g-~~vi~~~~~~~~~~~~~~~~g~~~vv-~~~~-~~~~~~~~~g~d~vid~~g~  257 (361)
                      +|||+|+ |-+|...++.+...| .+|++++....+...+.+.-.++.+. |-.+ .+..+....++|+||.+++-
T Consensus         2 KILITG~tGfiG~~l~~~Ll~~g~~~V~~ld~~~~~~~~~~~~~~~~~i~~Di~~~~~~~~~~~~~~d~Vih~a~~   77 (342)
T d2blla1           2 RVLILGVNGFIGNHLTERLLREDHYEVYGLDIGSDAISRFLNHPHFHFVEGDISIHSEWIEYHVKKCDVVLPLVAI   77 (342)
T ss_dssp             EEEEETCSSHHHHHHHHHHHHSTTCEEEEEESCCGGGGGGTTCTTEEEEECCTTTCSHHHHHHHHHCSEEEECBCC
T ss_pred             EEEEECCCcHHHHHHHHHHHHCCCCEEEEEeCCCcchhhhccCCCeEEEECccCChHHHHHHHHhCCCcccccccc
Confidence            5999998 999999998887777 58999887665544332211122211 2222 23344344579999998885

>d2bi7a1 c.4.1.3 (A:2-247,A:317-384) UDP-galactopyranose mutase, N-terminal domain {Klebsiella pneumoniae [TaxId: 573]}

class: Alpha and beta proteins (a/b)
fold: Nucleotide-binding domain
superfamily: Nucleotide-binding domain
family: UDP-galactopyranose mutase, N-terminal domain
domain: UDP-galactopyranose mutase, N-terminal domain
species: Klebsiella pneumoniae [TaxId: 573]

Probab=92.22  E-value=0.084  Score=45.11  Aligned_cols=34  Identities=24%  Similarity=0.272  Sum_probs=30.8

Q ss_pred             CCEEEEEcCChHHHHHHHHHHHcCCeEEEEeCCc
Q 018067          184 GMHVGVVGLGGLGHVAVKFAKAMGVKVTVISTSP  217 (361)
Q Consensus       184 g~~vlV~Gag~vG~~a~~la~~~g~~vi~~~~~~  217 (361)
                      .++|+|+|||..|+.++..+...|.+|.++...+
T Consensus         2 ~KKI~IIGaG~sGL~aA~~L~k~G~~V~viEk~~   35 (314)
T d2bi7a1           2 SKKILIVGAGFSGAVIGRQLAEKGHQVHIIDQRD   35 (314)
T ss_dssp             CCEEEEECCSHHHHHHHHHHHTTTCEEEEEESSS
T ss_pred             CCEEEEECCcHHHHHHHHHHHhCCCCEEEEECCC
Confidence            5789999999999999999999999999988765

>d1xgka_ c.2.1.2 (A:) Negative transcriptional regulator NmrA {Aspergillus nidulans [TaxId: 162425]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Tyrosine-dependent oxidoreductases
domain: Negative transcriptional regulator NmrA
species: Aspergillus nidulans [TaxId: 162425]

Probab=92.20  E-value=0.38  Score=41.15  Aligned_cols=74  Identities=18%  Similarity=0.107  Sum_probs=50.4

Q ss_pred             CCCEEEEEcC-ChHHHHHHHHHHHcCCeEEEEeCCchhH--HHHHHHcCCCEEe-cCCC-HHHHHHhcCCccEEEEcCC
Q 018067          183 PGMHVGVVGL-GGLGHVAVKFAKAMGVKVTVISTSPSKK--SEAIERLGADSFL-VSRD-QDEMQAAMGTMDGIIDTVS  256 (361)
Q Consensus       183 ~g~~vlV~Ga-g~vG~~a~~la~~~g~~vi~~~~~~~~~--~~~~~~~g~~~vv-~~~~-~~~~~~~~~g~d~vid~~g  256 (361)
                      +-++|+|+|+ |.+|..++..+...|.+|++++|+..+.  ..+...-|++.+. |..+ .+.+..+..+.|.++....
T Consensus         2 ~kktIlVtGatG~iG~~lv~~Ll~~G~~V~~l~R~~~~~~~~~~~~~~~v~~~~gD~~d~~~~~~~a~~~~~~~~~~~~   80 (350)
T d1xgka_           2 QKKTIAVVGATGRQGASLIRVAAAVGHHVRAQVHSLKGLIAEELQAIPNVTLFQGPLLNNVPLMDTLFEGAHLAFINTT   80 (350)
T ss_dssp             CCCCEEEESTTSHHHHHHHHHHHHTTCCEEEEESCSCSHHHHHHHTSTTEEEEESCCTTCHHHHHHHHTTCSEEEECCC
T ss_pred             CCCEEEEECCChHHHHHHHHHHHhCCCeEEEEECCcchhhhhhhcccCCCEEEEeeCCCcHHHHHHHhcCCceEEeecc
Confidence            4578999998 9999999999999999999999876543  2221112333222 2223 4556667778888876543

>d1n7ha_ c.2.1.2 (A:) GDP-mannose 4,6-dehydratase {Thale-cress (Arabidopsis thaliana) [TaxId: 3702]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Tyrosine-dependent oxidoreductases
domain: GDP-mannose 4,6-dehydratase
species: Thale-cress (Arabidopsis thaliana) [TaxId: 3702]

Probab=92.14  E-value=0.21  Score=42.53  Aligned_cols=73  Identities=12%  Similarity=0.120  Sum_probs=46.6

Q ss_pred             CEEEEEcC-ChHHHHHHHHHHHcCCeEEEEeCCch-----hHHHH---HHHcCC-C-EE--ecCCCHHHHHHhc--CCcc
Q 018067          185 MHVGVVGL-GGLGHVAVKFAKAMGVKVTVISTSPS-----KKSEA---IERLGA-D-SF--LVSRDQDEMQAAM--GTMD  249 (361)
Q Consensus       185 ~~vlV~Ga-g~vG~~a~~la~~~g~~vi~~~~~~~-----~~~~~---~~~~g~-~-~v--v~~~~~~~~~~~~--~g~d  249 (361)
                      +++||+|+ |-+|...+..+...|.+|+++++...     +...+   ...... . .+  .|..+.+.+....  .++|
T Consensus         2 k~~LVTGatGfiG~~lv~~Ll~~g~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~Di~~~~~~~~~~~~~~~D   81 (339)
T d1n7ha_           2 KIALITGITGQDGSYLTEFLLGKGYEVHGLIRRSSNFNTQRINHIYIDPHNVNKALMKLHYADLTDASSLRRWIDVIKPD   81 (339)
T ss_dssp             CEEEEETTTSHHHHHHHHHHHHTTCEEEEEECCCSSCCCTTTTTTC--------CCEEEEECCTTCHHHHHHHHHHHCCS
T ss_pred             CEEEEeCCccHHHHHHHHHHHHCcCEEEEEECCCcccchhhhhhhhhhhhhccccceEEEEccccCHHHHHHHHhhhccc
Confidence            57899998 99999999999999999999997432     11111   011111 1 11  2334445444432  3899


Q ss_pred             EEEEcCCC
Q 018067          250 GIIDTVSA  257 (361)
Q Consensus       250 ~vid~~g~  257 (361)
                      +|+.+++.
T Consensus        82 ~Vih~Aa~   89 (339)
T d1n7ha_          82 EVYNLAAQ   89 (339)
T ss_dssp             EEEECCSC
T ss_pred             hhhhcccc
Confidence            99999875

>d1iy9a_ c.66.1.17 (A:) Spermidine synthase {Bacillus subtilis [TaxId: 1423]}

class: Alpha and beta proteins (a/b)
fold: S-adenosyl-L-methionine-dependent methyltransferases
superfamily: S-adenosyl-L-methionine-dependent methyltransferases
family: Spermidine synthase
domain: Spermidine synthase
species: Bacillus subtilis [TaxId: 1423]

Probab=92.03  E-value=0.17  Score=42.18  Aligned_cols=95  Identities=23%  Similarity=0.183  Sum_probs=59.2

Q ss_pred             CCCCEEEEEcCChHHHHHHHHHHHcCC-eEEEEeCCchhHHHHHHHcC-----C-----CEEecCCCHHHHHHhcCCccE
Q 018067          182 KPGMHVGVVGLGGLGHVAVKFAKAMGV-KVTVISTSPSKKSEAIERLG-----A-----DSFLVSRDQDEMQAAMGTMDG  250 (361)
Q Consensus       182 ~~g~~vlV~Gag~vG~~a~~la~~~g~-~vi~~~~~~~~~~~~~~~~g-----~-----~~vv~~~~~~~~~~~~~g~d~  250 (361)
                      ...++|||+|+|. |..+..+++..+. +|.++.-++ ..-++++++-     +     -.++..+....++.....+|+
T Consensus        74 ~~p~~vLiiGgG~-G~~~~~~l~~~~~~~i~~VEID~-~Vi~~a~~~~~~~~~~~~d~r~~i~~~D~~~~l~~~~~~yDv  151 (274)
T d1iy9a_          74 PNPEHVLVVGGGD-GGVIREILKHPSVKKATLVDIDG-KVIEYSKKFLPSIAGKLDDPRVDVQVDDGFMHIAKSENQYDV  151 (274)
T ss_dssp             SSCCEEEEESCTT-CHHHHHHTTCTTCSEEEEEESCH-HHHHHHHHHCHHHHTTTTSTTEEEEESCSHHHHHTCCSCEEE
T ss_pred             CCcceEEecCCCC-cHHHHHHHhcCCcceEEEecCCH-HHHHHHHHhChhhcccccCCCeEEEechHHHHHhhcCCCCCE
Confidence            4568899998754 5566677777765 666665554 4445555442     1     123333334556555568999


Q ss_pred             EE-EcCC---------CcccHHHHHhccccCCEEEEec
Q 018067          251 II-DTVS---------AVHPLMPLIGLLKSQGKLVLVG  278 (361)
Q Consensus       251 vi-d~~g---------~~~~~~~~~~~l~~~G~~v~~g  278 (361)
                      || |...         +...++.+.+.|+++|.++.-.
T Consensus       152 Ii~D~~~p~~~~~~L~t~eFy~~~~~~L~~~Gv~v~q~  189 (274)
T d1iy9a_         152 IMVDSTEPVGPAVNLFTKGFYAGIAKALKEDGIFVAQT  189 (274)
T ss_dssp             EEESCSSCCSCCCCCSTTHHHHHHHHHEEEEEEEEEEC
T ss_pred             EEEcCCCCCCcchhhccHHHHHHHHhhcCCCceEEEec
Confidence            95 3322         1223677889999999998754

>d3cmco1 c.2.1.3 (O:0-148,O:313-333) Glyceraldehyde-3-phosphate dehydrogenase (GAPDH) {Bacillus stearothermophilus, nca 1503 [TaxId: 1422]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Glyceraldehyde-3-phosphate dehydrogenase-like, N-terminal domain
domain: Glyceraldehyde-3-phosphate dehydrogenase (GAPDH)
species: Bacillus stearothermophilus, nca 1503 [TaxId: 1422]

Probab=91.96  E-value=0.28  Score=37.59  Aligned_cols=95  Identities=18%  Similarity=0.268  Sum_probs=60.5

Q ss_pred             EEEEEcCChHHHHHHHHHHHc-CCeEEEEeCCchhHHHHHHHcC---------CC---------------EEecCCCHHH
Q 018067          186 HVGVVGLGGLGHVAVKFAKAM-GVKVTVISTSPSKKSEAIERLG---------AD---------------SFLVSRDQDE  240 (361)
Q Consensus       186 ~vlV~Gag~vG~~a~~la~~~-g~~vi~~~~~~~~~~~~~~~~g---------~~---------------~vv~~~~~~~  240 (361)
                      +|.|.|-|-+|..+...+-.. ..+++.+-+.. ..+.++.-+.         .+               .+...++++.
T Consensus         3 kIgINGfGRIGR~v~R~~l~~~~~~ivaINd~~-d~~~~ayll~yDS~hG~~~~~v~~~~~~l~i~g~~i~i~~~~~p~~   81 (171)
T d3cmco1           3 KVGINGFGRIGRNVFRAALKNPDIEVVAVNDLT-DANTLAHLLKYDSVHGRLDAEVSVNGNNLVVNGKEIIVKAERDPEN   81 (171)
T ss_dssp             EEEEESCSHHHHHHHHHHTTCTTEEEEEEECSS-CHHHHHHHHHEETTTEECSSCEEEETTEEEETTEEEEEECCSSGGG
T ss_pred             EEEEECCCHHHHHHHHHHhhCCCcEEEEEcCCC-CHHHHhhhhcccccCCcccccccccCCCEEeCCcceeeEecCCHHH
Confidence            578899999999988777654 46777776543 2333322111         00               0111222333


Q ss_pred             HHHhcCCccEEEEcCCCcccHHHHHhccccCCEEEEecCCC
Q 018067          241 MQAAMGTMDGIIDTVSAVHPLMPLIGLLKSQGKLVLVGAPE  281 (361)
Q Consensus       241 ~~~~~~g~d~vid~~g~~~~~~~~~~~l~~~G~~v~~g~~~  281 (361)
                      +.+-..++|+|+||+|.-.+.+.+...+..+-+-|.+..+.
T Consensus        82 i~W~~~~vDiViEcTG~f~t~~~~~~hl~~gakkViiSap~  122 (171)
T d3cmco1          82 LAWGEIGVDIVVESTGRFTKREDAAKHLEAGAKKVIISAPA  122 (171)
T ss_dssp             CCTGGGTCCEEEECSSSCCBHHHHTHHHHTTCSEEEESSCC
T ss_pred             ccccccCCcEEEEecCccCCHHHHHHHHhCCCceEEEeccc
Confidence            33333489999999999887888888898877666666554

>d1fcda1 c.3.1.5 (A:1-114,A:256-327) Flavocytochrome c sulfide dehydrogenase, FCSD, flavin-binding subunit {Purple phototrophic bacterium (Chromatium vinosum) [TaxId: 1049]}

class: Alpha and beta proteins (a/b)
fold: FAD/NAD(P)-binding domain
superfamily: FAD/NAD(P)-binding domain
family: FAD/NAD-linked reductases, N-terminal and central domains
domain: Flavocytochrome c sulfide dehydrogenase, FCSD, flavin-binding subunit
species: Purple phototrophic bacterium (Chromatium vinosum) [TaxId: 1049]

Probab=91.95  E-value=0.1  Score=39.84  Aligned_cols=35  Identities=37%  Similarity=0.482  Sum_probs=29.5

Q ss_pred             CCCEEEEEcCChHHHHHHHHHHHcC--CeEEEEeCCc
Q 018067          183 PGMHVGVVGLGGLGHVAVKFAKAMG--VKVTVISTSP  217 (361)
Q Consensus       183 ~g~~vlV~Gag~vG~~a~~la~~~g--~~vi~~~~~~  217 (361)
                      .|++|+|+|+|.+|+.+++.++..+  .+|+++...+
T Consensus         1 ~gkrivIvGgG~~G~e~A~~l~~~~~~~~Vtlie~~~   37 (186)
T d1fcda1           1 AGRKVVVVGGGTGGATAAKYIKLADPSIEVTLIEPNT   37 (186)
T ss_dssp             CCCEEEEECCSHHHHHHHHHHHHHCTTSEEEEECSCS
T ss_pred             CCCcEEEECccHHHHHHHHHHHHcCCCCcEEEEECCC
Confidence            4789999999999999999998877  4788876554

>d1tlta1 c.2.1.3 (A:5-127,A:268-308) Virulence factor MviM {Escherichia coli [TaxId: 562]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Glyceraldehyde-3-phosphate dehydrogenase-like, N-terminal domain
domain: Virulence factor MviM
species: Escherichia coli [TaxId: 562]

Probab=91.89  E-value=0.38  Score=36.38  Aligned_cols=86  Identities=19%  Similarity=0.180  Sum_probs=56.7

Q ss_pred             EEEEEcCChHHHH-HHHHHHHc-CCeEEEEe-CCchhHHHHHHHcCCCEEecCCCHHHHHHhcCCccEEEEcCCCcccHH
Q 018067          186 HVGVVGLGGLGHV-AVKFAKAM-GVKVTVIS-TSPSKKSEAIERLGADSFLVSRDQDEMQAAMGTMDGIIDTVSAVHPLM  262 (361)
Q Consensus       186 ~vlV~Gag~vG~~-a~~la~~~-g~~vi~~~-~~~~~~~~~~~~~g~~~vv~~~~~~~~~~~~~g~d~vid~~g~~~~~~  262 (361)
                      +|.|+|+|.+|.- .+..++.. +++++.+. ++.++...+.++++...   +++.+   .+...+|+|+-++....-..
T Consensus         3 ri~iIG~G~~g~~~~~~~l~~~~~~~i~~v~d~~~~~~~~~~~~~~~~~---~~~~~---~l~~~~D~V~I~tp~~~h~~   76 (164)
T d1tlta1           3 RIGVVGLGGIAQKAWLPVLAAASDWTLQGAWSPTRAKALPICESWRIPY---ADSLS---SLAASCDAVFVHSSTASHFD   76 (164)
T ss_dssp             EEEEECCSTHHHHTHHHHHHSCSSEEEEEEECSSCTTHHHHHHHHTCCB---CSSHH---HHHTTCSEEEECSCTTHHHH
T ss_pred             EEEEEcCCHHHHHHHHHHHHhCCCcEEEEEEechhHhhhhhhhcccccc---cccch---hhhhhcccccccccchhccc
Confidence            5889999999964 56666654 67776655 55666777778888652   22322   23356999998887655366


Q ss_pred             HHHhccccCCEEEEec
Q 018067          263 PLIGLLKSQGKLVLVG  278 (361)
Q Consensus       263 ~~~~~l~~~G~~v~~g  278 (361)
                      .+..+++.+ .-+.+.
T Consensus        77 ~~~~al~~g-k~V~~E   91 (164)
T d1tlta1          77 VVSTLLNAG-VHVCVD   91 (164)
T ss_dssp             HHHHHHHTT-CEEEEE
T ss_pred             ccccccccc-ceeecc
Confidence            666666665 555554

>d1i36a2 c.2.1.6 (A:1-152) Conserved hypothetical protein MTH1747 {Archaeon Methanobacterium thermoautotrophicum [TaxId: 145262]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: 6-phosphogluconate dehydrogenase-like, N-terminal domain
domain: Conserved hypothetical protein MTH1747
species: Archaeon Methanobacterium thermoautotrophicum [TaxId: 145262]

Probab=91.85  E-value=0.14  Score=38.47  Aligned_cols=86  Identities=16%  Similarity=0.203  Sum_probs=53.7

Q ss_pred             EEEEEcCChHHHHHHHHHHHcCCeEEEEeCCchhHHHH-HHHcCCCEEecCCCHHHHHHhcCCccEEEEcCCCcccHHHH
Q 018067          186 HVGVVGLGGLGHVAVKFAKAMGVKVTVISTSPSKKSEA-IERLGADSFLVSRDQDEMQAAMGTMDGIIDTVSAVHPLMPL  264 (361)
Q Consensus       186 ~vlV~Gag~vG~~a~~la~~~g~~vi~~~~~~~~~~~~-~~~~g~~~vv~~~~~~~~~~~~~g~d~vid~~g~~~~~~~~  264 (361)
                      +|-|+|.|.+|...+.-+...|.++++..+.+++.... .+..+..   +. .    .++....|+||-|+........+
T Consensus         2 kIgiIG~G~mG~~ia~~l~~~g~~v~~~~~~~~~~~~~~~~~~~~~---~~-~----~e~~~~~diIi~~v~~~~~~~~~   73 (152)
T d1i36a2           2 RVGFIGFGEVAQTLASRLRSRGVEVVTSLEGRSPSTIERARTVGVT---ET-S----EEDVYSCPVVISAVTPGVALGAA   73 (152)
T ss_dssp             EEEEESCSHHHHHHHHHHHHTTCEEEECCTTCCHHHHHHHHHHTCE---EC-C----HHHHHTSSEEEECSCGGGHHHHH
T ss_pred             EEEEEcHHHHHHHHHHHHHHCCCeEEEEcCchhHHHHHhhhccccc---cc-H----HHHHhhcCeEEEEecCchHHHHH
Confidence            57889999999999999999999998888776554333 2233321   11 1    22334588888888776534443


Q ss_pred             Hhccc-cCCEEEEecC
Q 018067          265 IGLLK-SQGKLVLVGA  279 (361)
Q Consensus       265 ~~~l~-~~G~~v~~g~  279 (361)
                      ..... .+..++.+..
T Consensus        74 ~~~~~~~~~~~id~st   89 (152)
T d1i36a2          74 RRAGRHVRGIYVDINN   89 (152)
T ss_dssp             HHHHTTCCSEEEECSC
T ss_pred             HhhcccCCceeeccCc
Confidence            33332 2445555544

>d1i0za1 c.2.1.5 (A:1-160) Lactate dehydrogenase {Human (Homo sapiens), heart isoform (H chain) [TaxId: 9606]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: LDH N-terminal domain-like
domain: Lactate dehydrogenase
species: Human (Homo sapiens), heart isoform (H chain) [TaxId: 9606]

Probab=91.84  E-value=0.71  Score=34.81  Aligned_cols=73  Identities=14%  Similarity=0.226  Sum_probs=48.3

Q ss_pred             CCCCEEEEEcCChHHHHHHHHHHHcCC--eEEEEeCCchhHHHHHHHcC-------CCEEecCCCHHHHHHhcCCccEEE
Q 018067          182 KPGMHVGVVGLGGLGHVAVKFAKAMGV--KVTVISTSPSKKSEAIERLG-------ADSFLVSRDQDEMQAAMGTMDGII  252 (361)
Q Consensus       182 ~~g~~vlV~Gag~vG~~a~~la~~~g~--~vi~~~~~~~~~~~~~~~~g-------~~~vv~~~~~~~~~~~~~g~d~vi  252 (361)
                      .+..+|.|+|+|.+|..++..+...|.  ++++++..+++....+.++.       ...++...+.    +...+.|+|+
T Consensus        18 ~~~~KV~IIGaG~VG~~~A~~l~~~~l~~ElvLiD~~~~~a~g~alDl~h~~~~~~~~~~~~~~d~----~~~~~adiVV   93 (160)
T d1i0za1          18 VPNNKITVVGVGQVGMACAISILGKSLADELALVDVLEDKLKGEMMDLQHGSLFLQTPKIVADKDY----SVTANSKIVV   93 (160)
T ss_dssp             CCSSEEEEECCSHHHHHHHHHHHHTTCCSEEEEECSCHHHHHHHHHHHHHTGGGCCCSEEEECSSG----GGGTTCSEEE
T ss_pred             CCCCeEEEECCCHHHHHHHHHHHhcCCCcEEEEEEeccchhHHHHHHHhccccccCCCeEEeccch----hhcccccEEE
Confidence            455789999999999999999999886  78888877665433333331       1111111221    2234789998


Q ss_pred             EcCCCc
Q 018067          253 DTVSAV  258 (361)
Q Consensus       253 d~~g~~  258 (361)
                      -++|.+
T Consensus        94 itAg~~   99 (160)
T d1i0za1          94 VTAGVR   99 (160)
T ss_dssp             ECCSCC
T ss_pred             EecCCc
Confidence            888864

>d2bhsa1 c.79.1.1 (A:2-293) O-acetylserine sulfhydrylase (Cysteine synthase) {Escherichia coli, isoform B (CysM) [TaxId: 562]}

class: Alpha and beta proteins (a/b)
fold: Tryptophan synthase beta subunit-like PLP-dependent enzymes
superfamily: Tryptophan synthase beta subunit-like PLP-dependent enzymes
family: Tryptophan synthase beta subunit-like PLP-dependent enzymes
domain: O-acetylserine sulfhydrylase (Cysteine synthase)
species: Escherichia coli, isoform B (CysM) [TaxId: 562]

Probab=91.78  E-value=1.9  Score=35.57  Aligned_cols=103  Identities=17%  Similarity=0.234  Sum_probs=65.3

Q ss_pred             hcCCCCCCCEEEEEcCChHHHHHHHHHHHcCCeEEEEeC--CchhHHHHHHHcCCCEEecCCCH----------------
Q 018067          177 FYGLDKPGMHVGVVGLGGLGHVAVKFAKAMGVKVTVIST--SPSKKSEAIERLGADSFLVSRDQ----------------  238 (361)
Q Consensus       177 ~~~~~~~g~~vlV~Gag~vG~~a~~la~~~g~~vi~~~~--~~~~~~~~~~~~g~~~vv~~~~~----------------  238 (361)
                      +.+.++++.+|+...+|..|++++..++.+|.+.+++..  .++.+....+.+|++.++...+.                
T Consensus        53 ~~g~~~~~~~vv~aSsGN~g~a~A~~a~~~G~~~~i~~p~~~~~~k~~~~~~~GA~v~~v~~~~~~~~a~~~~~~~~~~~  132 (292)
T d2bhsa1          53 KRGEIKPGDVLIEATSGNTGIALAMIAALKGYRMKLLMPDNMSQERRAAMRAYGAELILVTKEQGMEGARDLALEMANRG  132 (292)
T ss_dssp             HTTSCCTTSEEEEECCSHHHHHHHHHHHHHTCEEEEEEESCCCHHHHHHHHHTTCEEEEECTTTHHHHHHHHHHHHHHHT
T ss_pred             HhCCcCCCceeeeecccchhHHHHHHHHhcCcceEeeeccCchhhhhHHHHHhCCCcceeecccchHHHHHHHhhccccc
Confidence            345556677666667799999999999999986555553  34445566688998744332221                


Q ss_pred             -----------H------------HHHHhcCCccEEEEcCCCcccHH---HHHhccccCCEEEEecC
Q 018067          239 -----------D------------EMQAAMGTMDGIIDTVSAVHPLM---PLIGLLKSQGKLVLVGA  279 (361)
Q Consensus       239 -----------~------------~~~~~~~g~d~vid~~g~~~~~~---~~~~~l~~~G~~v~~g~  279 (361)
                                 +            ..+++.+.+|.++-++|+..++.   ..++...+..+++.+..
T Consensus       133 ~~~~~~~~~~~~~~~~~~~~~a~Ei~~q~~~~~d~vv~~~G~Gg~~~G~~~~~k~~~~~~~i~~Vep  199 (292)
T d2bhsa1         133 EGKLLDQFNNPDNPYAHYTTTGPEIWQQTGGRITHFVSSMGTTGTITGVSRFMREQSKPVTIVGLQP  199 (292)
T ss_dssp             SSEECCTTTCTHHHHHHHHTHHHHHHHHTTTCCCEEEEECSSSHHHHHHHHHHHTSSSCCEEEEEEE
T ss_pred             cccccCCCchhcchhhHHHHHHHHhHHhcCCCCCcccccCCCccchhhhhhhhhhccCcceEEEecc
Confidence                       0            01111135999999998765444   34455567778776643

>d1db3a_ c.2.1.2 (A:) GDP-mannose 4,6-dehydratase {Escherichia coli [TaxId: 562]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Tyrosine-dependent oxidoreductases
domain: GDP-mannose 4,6-dehydratase
species: Escherichia coli [TaxId: 562]

Probab=91.77  E-value=0.21  Score=43.18  Aligned_cols=73  Identities=14%  Similarity=0.139  Sum_probs=44.9

Q ss_pred             CEEEEEcC-ChHHHHHHHHHHHcCCeEEEEeCCch-----hHHHHHHHc---CCC-EE--ecCCCHHHHHHhcC--CccE
Q 018067          185 MHVGVVGL-GGLGHVAVKFAKAMGVKVTVISTSPS-----KKSEAIERL---GAD-SF--LVSRDQDEMQAAMG--TMDG  250 (361)
Q Consensus       185 ~~vlV~Ga-g~vG~~a~~la~~~g~~vi~~~~~~~-----~~~~~~~~~---g~~-~v--v~~~~~~~~~~~~~--g~d~  250 (361)
                      +.|||.|+ |-+|...+..+...|.+|+++++...     +...+....   ... ..  .|-.+.+.+..+..  .+|+
T Consensus         2 K~vLITGatGfiGs~lv~~Ll~~g~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~~~~~Dl~d~~~~~~~~~~~~~d~   81 (357)
T d1db3a_           2 KVALITGVTGQDGSYLAEFLLEKGYEVHGIKRRASSFNTERVDHIYQDPHTCNPKFHLHYGDLSDTSNLTRILREVQPDE   81 (357)
T ss_dssp             CEEEEETTTSHHHHHHHHHHHHTTCEEEEECC---------------------CCEEECCCCSSCHHHHHHHHHHHCCSE
T ss_pred             CEEEEeCCCcHHHHHHHHHHHHCcCEEEEEECCCcccchhhHHHHHhhhhhcCCCeEEEEeecCCHHHHHHHHhccCCCE
Confidence            57889997 99999999999999999999987432     111111111   111 11  13345566655544  6799


Q ss_pred             EEEcCCC
Q 018067          251 IIDTVSA  257 (361)
Q Consensus       251 vid~~g~  257 (361)
                      ||++++.
T Consensus        82 v~h~aa~   88 (357)
T d1db3a_          82 VYNLGAM   88 (357)
T ss_dssp             EEECCCC
T ss_pred             EEEeecc
Confidence            9999875

>d1b26a1 c.2.1.7 (A:179-412) Glutamate dehydrogenase {Thermotoga maritima [TaxId: 2336]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Aminoacid dehydrogenase-like, C-terminal domain
domain: Glutamate dehydrogenase
species: Thermotoga maritima [TaxId: 2336]

Probab=91.74  E-value=1.2  Score=35.75  Aligned_cols=43  Identities=30%  Similarity=0.547  Sum_probs=33.7

Q ss_pred             HhhhcCCCCCCCEEEEEcCChHHHHHHHHH-HHcCCeEEEEeCC
Q 018067          174 PLRFYGLDKPGMHVGVVGLGGLGHVAVKFA-KAMGVKVTVISTS  216 (361)
Q Consensus       174 ~l~~~~~~~~g~~vlV~Gag~vG~~a~~la-~~~g~~vi~~~~~  216 (361)
                      ++.....--.|.+|+|.|.|.+|..+++.+ +..|++++.+.++
T Consensus        21 ~~~~~~~~l~g~~vaIqG~GnVG~~~a~~L~~e~Ga~vv~vsd~   64 (234)
T d1b26a1          21 AMDVLGIDPKKATVAVQGFGNVGQFAALLISQELGSKVVAVSDS   64 (234)
T ss_dssp             HHHHTTCCTTTCEEEEECCSHHHHHHHHHHHHHHCCEEEEEEET
T ss_pred             HHHHcCCCcCCCEEEEECCCHHHHHHHHHHHHhcCCceEEeecC
Confidence            344444334789999999999999999987 5789999888754

>d1b5qa1 c.3.1.2 (A:5-293,A:406-463) Polyamine oxidase {Maize (Zea mays) [TaxId: 4577]}

class: Alpha and beta proteins (a/b)
fold: FAD/NAD(P)-binding domain
superfamily: FAD/NAD(P)-binding domain
family: FAD-linked reductases, N-terminal domain
domain: Polyamine oxidase
species: Maize (Zea mays) [TaxId: 4577]

Probab=91.74  E-value=0.075  Score=43.18  Aligned_cols=32  Identities=28%  Similarity=0.366  Sum_probs=28.0

Q ss_pred             EEEEEcCChHHHHHHHHHHHcCC-eEEEEeCCc
Q 018067          186 HVGVVGLGGLGHVAVKFAKAMGV-KVTVISTSP  217 (361)
Q Consensus       186 ~vlV~Gag~vG~~a~~la~~~g~-~vi~~~~~~  217 (361)
                      +|+|+|+|..|+.++..+...|. +|+++...+
T Consensus         2 ~V~IIGaG~aGL~aA~~L~~~G~~~V~vlE~~~   34 (347)
T d1b5qa1           2 RVIVVGAGMSGISAAKRLSEAGITDLLILEATD   34 (347)
T ss_dssp             CEEEECCBHHHHHHHHHHHHTTCCCEEEECSSS
T ss_pred             CEEEECCcHHHHHHHHHHHhCCCCcEEEEECCC
Confidence            48999999999999999999997 698887653

>d1yl7a1 c.2.1.3 (A:2-105,A:215-245) Dihydrodipicolinate reductase {Mycobacterium tuberculosis [TaxId: 1773]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Glyceraldehyde-3-phosphate dehydrogenase-like, N-terminal domain
domain: Dihydrodipicolinate reductase
species: Mycobacterium tuberculosis [TaxId: 1773]

Probab=91.72  E-value=0.31  Score=35.78  Aligned_cols=75  Identities=23%  Similarity=0.286  Sum_probs=47.2

Q ss_pred             EEEEEcC-ChHHHHHHHHHHH-cCCeEEEEeCCchhHHHHHHHcCCCEEecCCCHHHHHHhcCCccEEEEcCCCcccHHH
Q 018067          186 HVGVVGL-GGLGHVAVKFAKA-MGVKVTVISTSPSKKSEAIERLGADSFLVSRDQDEMQAAMGTMDGIIDTVSAVHPLMP  263 (361)
Q Consensus       186 ~vlV~Ga-g~vG~~a~~la~~-~g~~vi~~~~~~~~~~~~~~~~g~~~vv~~~~~~~~~~~~~g~d~vid~~g~~~~~~~  263 (361)
                      +|.|.|+ |-+|+..++.... -+.++....+..+.....                    ...++|++||++--.. ...
T Consensus         1 kI~v~Ga~GrMG~~i~~~i~~~~~~~l~~~~d~~~~~~~~--------------------~~~~~DvvIDFS~p~~-~~~   59 (135)
T d1yl7a1           1 RVGVLGAKGKVGATMVRAVAAADDLTLSAELDAGDPLSLL--------------------TDGNTEVVIDFTHPDV-VMG   59 (135)
T ss_dssp             EEEEETTTSHHHHHHHHHHHHSTTSEEEEEECTTCCTHHH--------------------HTTTCSEEEECCCTTT-HHH
T ss_pred             CEEEECCCCHHHHHHHHHHHhCCCCEEEEEEecCCchhhh--------------------ccccCCEEEEcccHHH-HHH
Confidence            5889997 9999998888765 466776554432221111                    1135788888776555 555


Q ss_pred             HHhccccCCEEEEecCCC
Q 018067          264 LIGLLKSQGKLVLVGAPE  281 (361)
Q Consensus       264 ~~~~l~~~G~~v~~g~~~  281 (361)
                      .++.+...|.=+.+|..+
T Consensus        60 ~~~~~~~~~~~~ViGTTG   77 (135)
T d1yl7a1          60 NLEFLIDNGIHAVVGTTG   77 (135)
T ss_dssp             HHHHHHHTTCEEEECCCC
T ss_pred             HHHHHHhcCCCEEEeccc
Confidence            555555566556667643

>d1fjha_ c.2.1.2 (A:) 3-alpha-hydroxysteroid dehydrogenase {Comamonas testosteroni [TaxId: 285]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Tyrosine-dependent oxidoreductases
domain: 3-alpha-hydroxysteroid dehydrogenase
species: Comamonas testosteroni [TaxId: 285]

Probab=91.68  E-value=0.1  Score=42.78  Aligned_cols=34  Identities=21%  Similarity=0.307  Sum_probs=29.5

Q ss_pred             CEEEEEcC-ChHHHHHHHHHHHcCCeEEEEeCCch
Q 018067          185 MHVGVVGL-GGLGHVAVKFAKAMGVKVTVISTSPS  218 (361)
Q Consensus       185 ~~vlV~Ga-g~vG~~a~~la~~~g~~vi~~~~~~~  218 (361)
                      +.|||.|+ +++|.++++.+...|++|++++++++
T Consensus         2 kVvlITGas~GIG~aiA~~la~~Ga~V~~~~~~~~   36 (257)
T d1fjha_           2 SIIVISGCATGIGAATRKVLEAAGHQIVGIDIRDA   36 (257)
T ss_dssp             CEEEEETTTSHHHHHHHHHHHHTTCEEEEEESSSS
T ss_pred             CEEEEeCCCCHHHHHHHHHHHHCCCEEEEEECChH
Confidence            35788887 99999999999999999999988654

>d2i0za1 c.3.1.8 (A:1-192,A:362-420) Flavoprotein BC4706 {Bacillus cereus [TaxId: 1396]}

class: Alpha and beta proteins (a/b)
fold: FAD/NAD(P)-binding domain
superfamily: FAD/NAD(P)-binding domain
family: HI0933 N-terminal domain-like
domain: Flavoprotein BC4706
species: Bacillus cereus [TaxId: 1396]

Probab=91.64  E-value=0.086  Score=42.94  Aligned_cols=32  Identities=28%  Similarity=0.277  Sum_probs=29.0

Q ss_pred             EEEEcCChHHHHHHHHHHHcCCeEEEEeCCch
Q 018067          187 VGVVGLGGLGHVAVKFAKAMGVKVTVISTSPS  218 (361)
Q Consensus       187 vlV~Gag~vG~~a~~la~~~g~~vi~~~~~~~  218 (361)
                      |+|+|+|+.|++++..|...|.+|+++...+.
T Consensus         5 ViIIGaG~aGl~aA~~la~~G~~V~liEk~~~   36 (251)
T d2i0za1           5 VIVIGGGPSGLMAAIGAAEEGANVLLLDKGNK   36 (251)
T ss_dssp             EEEECCSHHHHHHHHHHHHTTCCEEEECSSSS
T ss_pred             EEEECcCHHHHHHHHHHHHCCCcEEEEeCCCC
Confidence            88999999999999999999999999987654

>d1fl2a1 c.3.1.5 (A:212-325,A:452-521) Alkyl hydroperoxide reductase subunit F (AhpF), C-terminal domains {Escherichia coli [TaxId: 562]}

class: Alpha and beta proteins (a/b)
fold: FAD/NAD(P)-binding domain
superfamily: FAD/NAD(P)-binding domain
family: FAD/NAD-linked reductases, N-terminal and central domains
domain: Alkyl hydroperoxide reductase subunit F (AhpF), C-terminal domains
species: Escherichia coli [TaxId: 562]

Probab=91.59  E-value=0.082  Score=40.85  Aligned_cols=30  Identities=23%  Similarity=0.448  Sum_probs=27.6

Q ss_pred             EEEEEcCChHHHHHHHHHHHcCCeEEEEeC
Q 018067          186 HVGVVGLGGLGHVAVKFAKAMGVKVTVIST  215 (361)
Q Consensus       186 ~vlV~Gag~vG~~a~~la~~~g~~vi~~~~  215 (361)
                      .|+|+|+|+.|+.++..|...|.+|.++.+
T Consensus         3 DViIIGgGpaGl~AAi~aar~G~~v~iie~   32 (184)
T d1fl2a1           3 DVLIVGSGPAGAAAAIYSARKGIRTGLMGE   32 (184)
T ss_dssp             EEEEECCSHHHHHHHHHHHTTTCCEEEECS
T ss_pred             cEEEECcCHHHHHHHHHHHHcCCeEEEEEE
Confidence            388999999999999999999999999875

>d1xhca2 c.3.1.5 (A:104-225) NADH oxidase /nitrite reductase {Pyrococcus furiosus [TaxId: 2261]}

class: Alpha and beta proteins (a/b)
fold: FAD/NAD(P)-binding domain
superfamily: FAD/NAD(P)-binding domain
family: FAD/NAD-linked reductases, N-terminal and central domains
domain: NADH oxidase /nitrite reductase
species: Pyrococcus furiosus [TaxId: 2261]

Probab=91.58  E-value=0.13  Score=37.07  Aligned_cols=36  Identities=17%  Similarity=0.157  Sum_probs=32.1

Q ss_pred             CCCCEEEEEcCChHHHHHHHHHHHcCCeEEEEeCCc
Q 018067          182 KPGMHVGVVGLGGLGHVAVKFAKAMGVKVTVISTSP  217 (361)
Q Consensus       182 ~~g~~vlV~Gag~vG~~a~~la~~~g~~vi~~~~~~  217 (361)
                      +.+++++|+|+|.+|+=+++.+...|.+|.++.+.+
T Consensus        30 ~~~~~vvIiGgG~iG~E~A~~l~~~g~~Vtlv~~~~   65 (122)
T d1xhca2          30 ENSGEAIIIGGGFIGLELAGNLAEAGYHVKLIHRGA   65 (122)
T ss_dssp             HHHSEEEEEECSHHHHHHHHHHHHTTCEEEEECSSS
T ss_pred             hcCCcEEEECCcHHHHHHHHHhhcccceEEEEeccc
Confidence            456789999999999999999999999999988764

>d1rm4a1 c.2.1.3 (A:1-148,A:313-333) Glyceraldehyde-3-phosphate dehydrogenase (GAPDH) {Spinach (Spinacia oleracea) [TaxId: 3562]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Glyceraldehyde-3-phosphate dehydrogenase-like, N-terminal domain
domain: Glyceraldehyde-3-phosphate dehydrogenase (GAPDH)
species: Spinach (Spinacia oleracea) [TaxId: 3562]

Probab=91.56  E-value=0.29  Score=37.52  Aligned_cols=95  Identities=22%  Similarity=0.253  Sum_probs=58.6

Q ss_pred             EEEEEcCChHHHHHHHHHHHcC---CeEEEEeCCchhHHHHHHHc------C---CC-------E---------EecCCC
Q 018067          186 HVGVVGLGGLGHVAVKFAKAMG---VKVTVISTSPSKKSEAIERL------G---AD-------S---------FLVSRD  237 (361)
Q Consensus       186 ~vlV~Gag~vG~~a~~la~~~g---~~vi~~~~~~~~~~~~~~~~------g---~~-------~---------vv~~~~  237 (361)
                      +|.|.|-|-+|.++...+....   .+++.+.+.. ..+.++.-+      |   .+       .         +...++
T Consensus         2 kIgINGfGRIGR~v~R~~~~~~~~~i~ivaINd~~-~~~~~ayLlkyDSvhG~~~~~i~~~~~~~~~ing~~I~~~~~~~   80 (172)
T d1rm4a1           2 KVAINGFGRIGRNFLRCWHGRKDSPLDVVVINDTG-GVKQASHLLKYDSILGTFDADVKTAGDSAISVDGKVIKVVSDRN   80 (172)
T ss_dssp             EEEEECCSHHHHHHHHHHHHCSSCSEEEEEEECTT-CHHHHHHHHHCCTTTCSCSSCEEECTTSEEEETTEEEEEECCSC
T ss_pred             EEEEECCCHHHHHHHHHHHhCCCCCEEEEEEcCCC-CHHHHHHHHhcCcccccccceeEecCCcceEECCEEEEEecCCC
Confidence            5789999999999998776542   4677666553 233332211      1   01       0         111122


Q ss_pred             HHHHHHhcCCccEEEEcCCCcccHHHHHhccccCCEEEEecCCC
Q 018067          238 QDEMQAAMGTMDGIIDTVSAVHPLMPLIGLLKSQGKLVLVGAPE  281 (361)
Q Consensus       238 ~~~~~~~~~g~d~vid~~g~~~~~~~~~~~l~~~G~~v~~g~~~  281 (361)
                      ++.+.+...|+|+|+||+|.-.....+...+..|-+-|.+..+.
T Consensus        81 p~~i~W~~~gvDiViEcTG~f~~~~~~~~hl~~GakkViiSAP~  124 (172)
T d1rm4a1          81 PVNLPWGDMGIDLVIEGTGVFVDRDGAGKHLQAGAKKVLITAPG  124 (172)
T ss_dssp             GGGSCHHHHTCCEEEECSSSCCBHHHHHHHHHTTCSCEEESSCC
T ss_pred             hHHCChhhcCCCEEEecCceEccHHHHHHHHhcCCceEEeeccc
Confidence            23333333489999999999776888888888887556665544

>d2gqfa1 c.3.1.8 (A:1-194,A:343-401) Hypothetical protein HI0933 {Haemophilus influenzae [TaxId: 727]}

class: Alpha and beta proteins (a/b)
fold: FAD/NAD(P)-binding domain
superfamily: FAD/NAD(P)-binding domain
family: HI0933 N-terminal domain-like
domain: Hypothetical protein HI0933
species: Haemophilus influenzae [TaxId: 727]

Probab=91.55  E-value=0.089  Score=43.18  Aligned_cols=34  Identities=21%  Similarity=0.281  Sum_probs=30.4

Q ss_pred             EEEEEcCChHHHHHHHHHHHcCCeEEEEeCCchh
Q 018067          186 HVGVVGLGGLGHVAVKFAKAMGVKVTVISTSPSK  219 (361)
Q Consensus       186 ~vlV~Gag~vG~~a~~la~~~g~~vi~~~~~~~~  219 (361)
                      .|+|+|+|+.|++++..|...|.+|.++...+.-
T Consensus         6 DViIIGaG~aGl~aA~~la~~G~~V~vlEk~~~~   39 (253)
T d2gqfa1           6 ENIIIGAGAAGLFCAAQLAKLGKSVTVFDNGKKI   39 (253)
T ss_dssp             SEEEECCSHHHHHHHHHHHHTTCCEEEECSSSSS
T ss_pred             cEEEECcCHHHHHHHHHHHHCCCcEEEEecCCCC
Confidence            3899999999999999999999999999987653

>d1k3ta1 c.2.1.3 (A:1-164,A:334-359) Glyceraldehyde-3-phosphate dehydrogenase (GAPDH) {Trypanosoma cruzi [TaxId: 5693]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Glyceraldehyde-3-phosphate dehydrogenase-like, N-terminal domain
domain: Glyceraldehyde-3-phosphate dehydrogenase (GAPDH)
species: Trypanosoma cruzi [TaxId: 5693]

Probab=91.44  E-value=0.33  Score=37.88  Aligned_cols=96  Identities=16%  Similarity=0.266  Sum_probs=58.5

Q ss_pred             EEEEEcCChHHHHHHHHHHHcC-----CeEEEEeCC---chhHHHHHHHc---C---CC---------------EEec--
Q 018067          186 HVGVVGLGGLGHVAVKFAKAMG-----VKVTVISTS---PSKKSEAIERL---G---AD---------------SFLV--  234 (361)
Q Consensus       186 ~vlV~Gag~vG~~a~~la~~~g-----~~vi~~~~~---~~~~~~~~~~~---g---~~---------------~vv~--  234 (361)
                      +|.|.|-|-+|..+...+-..+     .+++.+...   .+....+.+--   |   .+               .+++  
T Consensus         4 kigINGFGRIGR~vlR~~~~~~~~~~~i~iv~Ind~~~~~~~~ayLlkyDSvhG~~~~~v~~~~~~~~~~~~~~~i~~g~   83 (190)
T d1k3ta1           4 KVGINGFGRIGRMVFQALCEDGLLGTEIDVVAVVDMNTDAEYFAYQMRYDTVHGKFKYEVTTTKSSPSVAKDDTLVVNGH   83 (190)
T ss_dssp             EEEEECCSHHHHHHHHHHHHTTCBTTTEEEEEEEESCCCHHHHHHHHHEETTTEECSSCEEEECSSTTCSSCCEEEETTE
T ss_pred             EEEEECCChHHHHHHHHHHHcCCCCCCeEEEEEecCCCCHHHHHHHhhccccccCCCceEEEccCccccccccceEEcCc
Confidence            5889999999999887664432     355554443   23333343311   1   00               1111  


Q ss_pred             -------CCCHHHHHHhcCCccEEEEcCCCcccHHHHHhccccCCEEEEecCCC
Q 018067          235 -------SRDQDEMQAAMGTMDGIIDTVSAVHPLMPLIGLLKSQGKLVLVGAPE  281 (361)
Q Consensus       235 -------~~~~~~~~~~~~g~d~vid~~g~~~~~~~~~~~l~~~G~~v~~g~~~  281 (361)
                             .++++.+.+..-++|+|+||+|.-.....+...+..|-+-|.+..+.
T Consensus        84 ~i~~~~~~~~p~~i~W~~~gvDiViEcTG~f~~~~~a~~hl~~GakkViiSAP~  137 (190)
T d1k3ta1          84 RILCVKAQRNPADLPWGKLGVEYVIESTGLFTAKAAAEGHLRGGARKVVISAPA  137 (190)
T ss_dssp             EEEEEECCSCGGGSCHHHHTCCEEEECSSSCCBHHHHTHHHHTTCSEEEESSCC
T ss_pred             eEEecccCCChhHCCHhhcCCcEEEEecccccccccchhhcccCcceeeeccCC
Confidence                   22233333333489999999998777888888998887767766553

>d1np3a2 c.2.1.6 (A:1-182) Class I ketol-acid reductoisomerase (KARI) {Pseudomonas aeruginosa [TaxId: 287]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: 6-phosphogluconate dehydrogenase-like, N-terminal domain
domain: Class I ketol-acid reductoisomerase (KARI)
species: Pseudomonas aeruginosa [TaxId: 287]

Probab=91.44  E-value=0.65  Score=35.39  Aligned_cols=87  Identities=25%  Similarity=0.263  Sum_probs=63.4

Q ss_pred             CCCEEEEEcCChHHHHHHHHHHHcCCeEEEEeCCchhHHHHHHHcCCCEEecCCCHHHHHHhcCCccEEEEcCCCcccHH
Q 018067          183 PGMHVGVVGLGGLGHVAVKFAKAMGVKVTVISTSPSKKSEAIERLGADSFLVSRDQDEMQAAMGTMDGIIDTVSAVHPLM  262 (361)
Q Consensus       183 ~g~~vlV~Gag~vG~~a~~la~~~g~~vi~~~~~~~~~~~~~~~~g~~~vv~~~~~~~~~~~~~g~d~vid~~g~~~~~~  262 (361)
                      ++++|.|+|-|.-|.+.++-+|..|.+|++--+...+..+.+++-|.+..       .+.++....|+|.-.+..+. ..
T Consensus        15 k~k~IaViGYGsQG~AhAlNLrDSG~~V~VGLr~gs~s~~~A~~~Gf~v~-------~~~eA~~~aDiim~L~PD~~-q~   86 (182)
T d1np3a2          15 QGKKVAIIGYGSQGHAHACNLKDSGVDVTVGLRSGSATVAKAEAHGLKVA-------DVKTAVAAADVVMILTPDEF-QG   86 (182)
T ss_dssp             HTSCEEEECCSHHHHHHHHHHHHTTCCEEEECCTTCHHHHHHHHTTCEEE-------CHHHHHHTCSEEEECSCHHH-HH
T ss_pred             CCCEEEEEeeCcHhHHHHhhhhhcCCCEEEEcCCCCccHHHHhhhccccc-------cHHHHhhhcCeeeeecchHH-HH
Confidence            57889999999999999999999999999888877665566677776532       23455567899988887643 33


Q ss_pred             HHHh-----ccccCCEEEEe
Q 018067          263 PLIG-----LLKSQGKLVLV  277 (361)
Q Consensus       263 ~~~~-----~l~~~G~~v~~  277 (361)
                      ..++     .|+++-.+.+-
T Consensus        87 ~vy~~~I~p~lk~g~~L~Fa  106 (182)
T d1np3a2          87 RLYKEEIEPNLKKGATLAFA  106 (182)
T ss_dssp             HHHHHHTGGGCCTTCEEEES
T ss_pred             HHHHHhhhhhcCCCcEEEEe
Confidence            4443     45666665554

>d2bcgg1 c.3.1.3 (G:5-301) Guanine nucleotide dissociation inhibitor, GDI {Baker's yeast (Saccharomyces cerevisiae) [TaxId: 4932]}

class: Alpha and beta proteins (a/b)
fold: FAD/NAD(P)-binding domain
superfamily: FAD/NAD(P)-binding domain
family: GDI-like N domain
domain: Guanine nucleotide dissociation inhibitor, GDI
species: Baker's yeast (Saccharomyces cerevisiae) [TaxId: 4932]

Probab=91.28  E-value=0.1  Score=41.95  Aligned_cols=31  Identities=26%  Similarity=0.198  Sum_probs=28.7

Q ss_pred             EEEEcCChHHHHHHHHHHHcCCeEEEEeCCc
Q 018067          187 VGVVGLGGLGHVAVKFAKAMGVKVTVISTSP  217 (361)
Q Consensus       187 vlV~Gag~vG~~a~~la~~~g~~vi~~~~~~  217 (361)
                      |+|+|+|..|+.++..+...|.+|.++...+
T Consensus         8 viViGaG~~Gl~~A~~La~~G~~V~vlE~~~   38 (297)
T d2bcgg1           8 VIVLGTGITECILSGLLSVDGKKVLHIDKQD   38 (297)
T ss_dssp             EEEECCSHHHHHHHHHHHHTTCCEEEECSSS
T ss_pred             EEEECcCHHHHHHHHHHHHCCCCEEEEcCCC
Confidence            8999999999999999999999999998864

>d2b2ca1 c.66.1.17 (A:3-314) Spermidine synthase {Caenorhabditis elegans [TaxId: 6239]}

class: Alpha and beta proteins (a/b)
fold: S-adenosyl-L-methionine-dependent methyltransferases
superfamily: S-adenosyl-L-methionine-dependent methyltransferases
family: Spermidine synthase
domain: Spermidine synthase
species: Caenorhabditis elegans [TaxId: 6239]

Probab=91.26  E-value=0.33  Score=41.06  Aligned_cols=96  Identities=20%  Similarity=0.168  Sum_probs=57.6

Q ss_pred             CCCCEEEEEcCChHHHHHHHHHHHcCC-eEEEEeCCchhHHHHHHHcCC---C-------EEecCCCHHHHHHhcCCccE
Q 018067          182 KPGMHVGVVGLGGLGHVAVKFAKAMGV-KVTVISTSPSKKSEAIERLGA---D-------SFLVSRDQDEMQAAMGTMDG  250 (361)
Q Consensus       182 ~~g~~vlV~Gag~vG~~a~~la~~~g~-~vi~~~~~~~~~~~~~~~~g~---~-------~vv~~~~~~~~~~~~~g~d~  250 (361)
                      ...++|||+|+|. |..+-.+++.... +|.++ .-+.+.-++++++-.   .       .++..+....++.....+|+
T Consensus       105 ~~pk~VLIiGgG~-G~~~rellk~~~v~~v~~V-EID~~Vv~~a~~~~~~~~~~~~dprv~i~i~Da~~~l~~~~~~yDv  182 (312)
T d2b2ca1         105 PDPKRVLIIGGGD-GGILREVLKHESVEKVTMC-EIDEMVIDVAKKFLPGMSCGFSHPKLDLFCGDGFEFLKNHKNEFDV  182 (312)
T ss_dssp             SSCCEEEEESCTT-SHHHHHHTTCTTCCEEEEE-CSCHHHHHHHHHHCTTTSGGGGCTTEEEECSCHHHHHHHCTTCEEE
T ss_pred             CCCCeEEEeCCCc-hHHHHHHHHcCCcceEEEE-cccHHHHHHHHhhchhhccccCCCCeEEEEchHHHHHHhCCCCCCE
Confidence            4567899998765 4455677777766 55555 545555666666421   0       12222223455555568999


Q ss_pred             EEEcCCC----------cccHHHHHhccccCCEEEEecC
Q 018067          251 IIDTVSA----------VHPLMPLIGLLKSQGKLVLVGA  279 (361)
Q Consensus       251 vid~~g~----------~~~~~~~~~~l~~~G~~v~~g~  279 (361)
                      ||--+..          ..-+..+.+.|+++|.++.-+.
T Consensus       183 II~D~~dp~~~~~~L~t~eFy~~~~~~L~~~Gi~v~q~~  221 (312)
T d2b2ca1         183 IITDSSDPVGPAESLFGQSYYELLRDALKEDGILSSQGE  221 (312)
T ss_dssp             EEECCC-------------HHHHHHHHEEEEEEEEEECC
T ss_pred             EEEcCCCCCCcchhhhhHHHHHHHHhhcCCCcEEEEecC
Confidence            9742221          1235678889999999998753

>d1dxla1 c.3.1.5 (A:4-152,A:276-347) Dihydrolipoamide dehydrogenase {Garden pea (Pisum sativum) [TaxId: 3888]}

class: Alpha and beta proteins (a/b)
fold: FAD/NAD(P)-binding domain
superfamily: FAD/NAD(P)-binding domain
family: FAD/NAD-linked reductases, N-terminal and central domains
domain: Dihydrolipoamide dehydrogenase
species: Garden pea (Pisum sativum) [TaxId: 3888]

Probab=91.21  E-value=0.097  Score=41.71  Aligned_cols=31  Identities=35%  Similarity=0.362  Sum_probs=28.3

Q ss_pred             EEEEcCChHHHHHHHHHHHcCCeEEEEeCCc
Q 018067          187 VGVVGLGGLGHVAVKFAKAMGVKVTVISTSP  217 (361)
Q Consensus       187 vlV~Gag~vG~~a~~la~~~g~~vi~~~~~~  217 (361)
                      |+|+|+|+.|+.++..+...|.+|+++...+
T Consensus         6 vvVIGgGpaGl~aA~~aa~~G~kV~vie~~~   36 (221)
T d1dxla1           6 VVIIGGGPGGYVAAIKAAQLGFKTTCIEKRG   36 (221)
T ss_dssp             EEEECCSHHHHHHHHHHHHHTCCEEEEECSS
T ss_pred             EEEECCCHHHHHHHHHHHHCCCcEEEEEecC
Confidence            8899999999999999999999999998653

>d1a9xa3 c.30.1.1 (A:1-127) Carbamoyl phosphate synthetase (CPS), large subunit PreATP-grasp domains {Escherichia coli [TaxId: 562]}

class: Alpha and beta proteins (a/b)
fold: PreATP-grasp domain
superfamily: PreATP-grasp domain
family: BC N-terminal domain-like
domain: Carbamoyl phosphate synthetase (CPS), large subunit PreATP-grasp domains
species: Escherichia coli [TaxId: 562]

Probab=91.20  E-value=0.28  Score=35.47  Aligned_cols=87  Identities=16%  Similarity=0.267  Sum_probs=56.7

Q ss_pred             CCCCEEEEEcCCh--HH---------HHHHHHHHHcCCeEEEEeCCchhHHHHHHHcCCCE-EecCCCHHHHHHhc--CC
Q 018067          182 KPGMHVGVVGLGG--LG---------HVAVKFAKAMGVKVTVISTSPSKKSEAIERLGADS-FLVSRDQDEMQAAM--GT  247 (361)
Q Consensus       182 ~~g~~vlV~Gag~--vG---------~~a~~la~~~g~~vi~~~~~~~~~~~~~~~~g~~~-vv~~~~~~~~~~~~--~g  247 (361)
                      ..-++|||+|+|+  +|         .-++..+|..|++++++..+++...-- .++ ++. .+.+-..+.+.++-  +.
T Consensus         5 ~~~kkvlilGsGp~~IGq~~EfDy~~~~a~~alke~g~~~iliN~NP~TVstd-~d~-aD~lYfePlt~e~v~~Ii~~E~   82 (127)
T d1a9xa3           5 TDIKSILILGAGPIVIGQACEFDYSGAQACKALREEGYRVINVNSNPATIMTD-PEM-ADATYIEPIHWEVVRKIIEKER   82 (127)
T ss_dssp             SSCCEEEEECCCSCBTTBCTHHHHHHHHHHHHHHHHTCEEEEECSCTTCGGGC-GGG-SSEEECSCCCHHHHHHHHHHHC
T ss_pred             CCCCEEEEECCCcCcccccchhHHHHHHHHHHHHHcCCeEEEecCchHhhhcC-hhh-cceeeeecCCHHHHHHHHHHhC
Confidence            3558899999874  33         344555556799999999998764211 122 343 33344556666554  48


Q ss_pred             ccEEEEcCCCcccHHHHHhcccc
Q 018067          248 MDGIIDTVSAVHPLMPLIGLLKS  270 (361)
Q Consensus       248 ~d~vid~~g~~~~~~~~~~~l~~  270 (361)
                      .|.++-..|+...++.+.++.+.
T Consensus        83 pd~il~~~GGQtalnla~~L~~~  105 (127)
T d1a9xa3          83 PDAVLPTMGGQTALNCALELERQ  105 (127)
T ss_dssp             CSEEECSSSHHHHHHHHHHHHHT
T ss_pred             cCCeEEEeeeehHhHHHHHHHHc
Confidence            99999999998877777766543

>d2ivda1 c.3.1.2 (A:10-306,A:415-464) Protoporphyrinogen oxidase {Myxococcus xanthus [TaxId: 34]}

class: Alpha and beta proteins (a/b)
fold: FAD/NAD(P)-binding domain
superfamily: FAD/NAD(P)-binding domain
family: FAD-linked reductases, N-terminal domain
domain: Protoporphyrinogen oxidase
species: Myxococcus xanthus [TaxId: 34]

Probab=91.14  E-value=0.081  Score=43.94  Aligned_cols=32  Identities=25%  Similarity=0.382  Sum_probs=29.0

Q ss_pred             EEEEEcCChHHHHHHHHHHHcCCeEEEEeCCc
Q 018067          186 HVGVVGLGGLGHVAVKFAKAMGVKVTVISTSP  217 (361)
Q Consensus       186 ~vlV~Gag~vG~~a~~la~~~g~~vi~~~~~~  217 (361)
                      +|+|+|+|..|+.++..+...|.+|+++...+
T Consensus         2 ~V~IIGaG~aGL~aA~~L~~~G~~V~vlE~~~   33 (347)
T d2ivda1           2 NVAVVGGGISGLAVAHHLRSRGTDAVLLESSA   33 (347)
T ss_dssp             CEEEECCBHHHHHHHHHHHTTTCCEEEECSSS
T ss_pred             eEEEECCCHHHHHHHHHHHhCCCCEEEEecCC
Confidence            48999999999999999999999999987653

>d1trba1 c.3.1.5 (A:1-118,A:245-316) Thioredoxin reductase {Escherichia coli [TaxId: 562]}

class: Alpha and beta proteins (a/b)
fold: FAD/NAD(P)-binding domain
superfamily: FAD/NAD(P)-binding domain
family: FAD/NAD-linked reductases, N-terminal and central domains
domain: Thioredoxin reductase
species: Escherichia coli [TaxId: 562]

Probab=91.13  E-value=0.059  Score=42.19  Aligned_cols=34  Identities=18%  Similarity=0.252  Sum_probs=29.9

Q ss_pred             CCCEEEEEcCChHHHHHHHHHHHcCCeEEEEeCC
Q 018067          183 PGMHVGVVGLGGLGHVAVKFAKAMGVKVTVISTS  216 (361)
Q Consensus       183 ~g~~vlV~Gag~vG~~a~~la~~~g~~vi~~~~~  216 (361)
                      ++..|+|+|+|+.|+.++..|...|.+|+++.+.
T Consensus         4 k~~dVvIIGGGpaGl~AA~~~ar~g~~v~iie~~   37 (190)
T d1trba1           4 KHSKLLILGSGPAGYTAAVYAARANLQPVLITGM   37 (190)
T ss_dssp             EEEEEEEECCSHHHHHHHHHHHTTTCCCEEECCS
T ss_pred             CCCcEEEECCCHHHHHHHHHHHHcCCceEEEEee
Confidence            3457999999999999999999999999998754

>d2ldxa1 c.2.1.5 (A:1-159) Lactate dehydrogenase {Mouse (Mus musculus) [TaxId: 10090]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: LDH N-terminal domain-like
domain: Lactate dehydrogenase
species: Mouse (Mus musculus) [TaxId: 10090]

Probab=90.91  E-value=0.7  Score=34.82  Aligned_cols=71  Identities=17%  Similarity=0.228  Sum_probs=46.5

Q ss_pred             CCEEEEEcCChHHHHHHHHHHHcCC--eEEEEeCCchhHHHHHHHcC-------CCEEecCCCHHHHHHhcCCccEEEEc
Q 018067          184 GMHVGVVGLGGLGHVAVKFAKAMGV--KVTVISTSPSKKSEAIERLG-------ADSFLVSRDQDEMQAAMGTMDGIIDT  254 (361)
Q Consensus       184 g~~vlV~Gag~vG~~a~~la~~~g~--~vi~~~~~~~~~~~~~~~~g-------~~~vv~~~~~~~~~~~~~g~d~vid~  254 (361)
                      ..+|.|+|+|.+|..++..+...|.  ++++++..+++....+.++.       ...++...+.    +...+.|+|+-+
T Consensus        19 ~~KI~IIGaG~VG~~~A~~l~~~~l~~elvL~D~~~~~a~g~alDl~~~~~~~~~~~~~~~~d~----~~~~~adivvit   94 (159)
T d2ldxa1          19 RCKITVVGVGDVGMACAISILLKGLADELALVDADTDKLRGEALDLQHGSLFLSTPKIVFGKDY----NVSANSKLVIIT   94 (159)
T ss_dssp             CCEEEEECCSHHHHHHHHHHHTTTSCSEEEEECSCHHHHHHHHHHHHHTTTTCSCCEEEEESSG----GGGTTEEEEEEC
T ss_pred             CCeEEEECCCHHHHHHHHHHHhcCCCCEEEEEeCCchhhhccHHHHhCcchhcCCCeEEeccch----hhhccccEEEEe
Confidence            3579999999999999999988875  78888877665433333331       1222211221    223578999988


Q ss_pred             CCCc
Q 018067          255 VSAV  258 (361)
Q Consensus       255 ~g~~  258 (361)
                      +|.+
T Consensus        95 ag~~   98 (159)
T d2ldxa1          95 AGAR   98 (159)
T ss_dssp             CSCC
T ss_pred             cccc
Confidence            8864

>d1rpna_ c.2.1.2 (A:) GDP-mannose 4,6-dehydratase {Pseudomonas aeruginosa [TaxId: 287]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Tyrosine-dependent oxidoreductases
domain: GDP-mannose 4,6-dehydratase
species: Pseudomonas aeruginosa [TaxId: 287]

Probab=90.82  E-value=0.55  Score=39.34  Aligned_cols=72  Identities=18%  Similarity=0.159  Sum_probs=47.2

Q ss_pred             CEEEEEcC-ChHHHHHHHHHHHcCCeEEEEeCCchh--HHHHHHHcCCC-----EEecCCCHHHHHHhc--CCccEEEEc
Q 018067          185 MHVGVVGL-GGLGHVAVKFAKAMGVKVTVISTSPSK--KSEAIERLGAD-----SFLVSRDQDEMQAAM--GTMDGIIDT  254 (361)
Q Consensus       185 ~~vlV~Ga-g~vG~~a~~la~~~g~~vi~~~~~~~~--~~~~~~~~g~~-----~vv~~~~~~~~~~~~--~g~d~vid~  254 (361)
                      ++|||.|+ |-+|...+..+...|.+|+++++....  ...+ +.++..     .-.|-.+.+.+....  ...++++.+
T Consensus         1 k~vLItG~tGfiG~~l~~~Ll~~g~~V~~~~r~~~~~~~~~l-~~~~~~~~~~~~~~Dl~d~~~~~~~~~~~~~~~~~~~   79 (321)
T d1rpna_           1 RSALVTGITGQDGAYLAKLLLEKGYRVHGLVARRSSDTRWRL-RELGIEGDIQYEDGDMADACSVQRAVIKAQPQEVYNL   79 (321)
T ss_dssp             CEEEEETTTSHHHHHHHHHHHHTTCEEEEEECCCSSCCCHHH-HHTTCGGGEEEEECCTTCHHHHHHHHHHHCCSEEEEC
T ss_pred             CEEEEECCCCHHHHHHHHHHHHCcCEEEEEECCCCcccHHHH-HHhcccCCcEEEEccccChHHhhhhhccccccccccc
Confidence            47999998 999999999888889999999875432  2223 334432     123445555444433  256777777


Q ss_pred             CCC
Q 018067          255 VSA  257 (361)
Q Consensus       255 ~g~  257 (361)
                      +..
T Consensus        80 a~~   82 (321)
T d1rpna_          80 AAQ   82 (321)
T ss_dssp             CSC
T ss_pred             ccc
Confidence            654

>d1uxja1 c.2.1.5 (A:2-143) Malate dehydrogenase {Chloroflexus aurantiacus [TaxId: 1108]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: LDH N-terminal domain-like
domain: Malate dehydrogenase
species: Chloroflexus aurantiacus [TaxId: 1108]

Probab=90.67  E-value=0.13  Score=38.28  Aligned_cols=70  Identities=16%  Similarity=0.195  Sum_probs=45.0

Q ss_pred             CEEEEEcCChHHHHHHHHHHHcCC-eEEEEeCCchhHHHHHHHcCC-------C-EEecCCCHHHHHHhcCCccEEEEcC
Q 018067          185 MHVGVVGLGGLGHVAVKFAKAMGV-KVTVISTSPSKKSEAIERLGA-------D-SFLVSRDQDEMQAAMGTMDGIIDTV  255 (361)
Q Consensus       185 ~~vlV~Gag~vG~~a~~la~~~g~-~vi~~~~~~~~~~~~~~~~g~-------~-~vv~~~~~~~~~~~~~g~d~vid~~  255 (361)
                      .+|.|+|+|.+|..++.++...+. +++.++..+++....+.++..       . .+....+.    +...+.|+|+-++
T Consensus         2 ~KI~IIGaG~VG~~~A~~l~~~~l~dl~l~D~~~~~~~~~~~Dl~~~~~~~~~~~~i~~~~d~----~~~~~advvvita   77 (142)
T d1uxja1           2 KKISIIGAGFVGSTTAHWLAAKELGDIVLLDIVEGVPQGKALDLYEASPIEGFDVRVTGTNNY----ADTANSDVIVVTS   77 (142)
T ss_dssp             CEEEEECCSHHHHHHHHHHHHHTCSEEEEECSSSSHHHHHHHHHHTTHHHHTCCCCEEEESCG----GGGTTCSEEEECC
T ss_pred             CeEEEECCCHHHHHHHHHHHhCCcceEEEEeeccccchhHHHHhhccccccCCCCEEEecCcH----HHhcCCCEEEEee
Confidence            478899999999998888777665 888888777654444344321       1 11111111    1234789999998


Q ss_pred             CCc
Q 018067          256 SAV  258 (361)
Q Consensus       256 g~~  258 (361)
                      |.+
T Consensus        78 g~~   80 (142)
T d1uxja1          78 GAP   80 (142)
T ss_dssp             SCC
T ss_pred             ecc
Confidence            864

>d1g6q1_ c.66.1.6 (1:) Arginine methyltransferase, HMT1 {Baker's yeast (Saccharomyces cerevisiae) [TaxId: 4932]}

class: Alpha and beta proteins (a/b)
fold: S-adenosyl-L-methionine-dependent methyltransferases
superfamily: S-adenosyl-L-methionine-dependent methyltransferases
family: Arginine methyltransferase
domain: Arginine methyltransferase, HMT1
species: Baker's yeast (Saccharomyces cerevisiae) [TaxId: 4932]

Probab=90.64  E-value=0.12  Score=44.44  Aligned_cols=93  Identities=22%  Similarity=0.133  Sum_probs=50.1

Q ss_pred             CCCCCEEEEEcCChHHHHHHHHHHHcCC-eEEEEeCCch--hHHHHHHHcCCC--EEecCCCHHHHHHhcCCccEEEEcC
Q 018067          181 DKPGMHVGVVGLGGLGHVAVKFAKAMGV-KVTVISTSPS--KKSEAIERLGAD--SFLVSRDQDEMQAAMGTMDGIIDTV  255 (361)
Q Consensus       181 ~~~g~~vlV~Gag~vG~~a~~la~~~g~-~vi~~~~~~~--~~~~~~~~~g~~--~vv~~~~~~~~~~~~~g~d~vid~~  255 (361)
                      ..+|++||-+|+|. |.++..+|+ .|+ +|++++.++.  ......++.+..  ..+...+...+......+|+|+...
T Consensus        36 ~~~~~~VLDlGcGt-G~ls~~aa~-~Ga~~V~avd~s~~~~~a~~~~~~~~~~~~i~~i~~~~~~l~~~~~~~D~i~se~  113 (328)
T d1g6q1_          36 LFKDKIVLDVGCGT-GILSMFAAK-HGAKHVIGVDMSSIIEMAKELVELNGFSDKITLLRGKLEDVHLPFPKVDIIISEW  113 (328)
T ss_dssp             HHTTCEEEEETCTT-SHHHHHHHH-TCCSEEEEEESSTHHHHHHHHHHHTTCTTTEEEEESCTTTSCCSSSCEEEEEECC
T ss_pred             cCCcCEEEEeCCCC-CHHHHHHHH-hCCCEEEEEeCCHHHHHHHHHHHHhCccccceEEEeehhhccCcccceeEEEEEe
Confidence            45889999999863 666655555 566 8888887652  112222344432  1122222111111124699887632


Q ss_pred             C-----Cc----ccHHHHHhccccCCEEE
Q 018067          256 S-----AV----HPLMPLIGLLKSQGKLV  275 (361)
Q Consensus       256 g-----~~----~~~~~~~~~l~~~G~~v  275 (361)
                      -     ..    ..+....+.|+|+|+++
T Consensus       114 ~~~~~~~e~~~~~~~~a~~r~LkpgG~ii  142 (328)
T d1g6q1_         114 MGYFLLYESMMDTVLYARDHYLVEGGLIF  142 (328)
T ss_dssp             CBTTBSTTCCHHHHHHHHHHHEEEEEEEE
T ss_pred             cceeeccchhHHHHHHHHHhccCCCeEEE
Confidence            2     11    12333347899999875

>d2fy8a1 c.2.1.9 (A:116-244) Potassium channel-related protein MthK {Archaeon Methanothermobacter thermautotrophicus [TaxId: 145262]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Potassium channel NAD-binding domain
domain: Potassium channel-related protein MthK
species: Archaeon Methanothermobacter thermautotrophicus [TaxId: 145262]

Probab=90.63  E-value=0.8  Score=32.85  Aligned_cols=91  Identities=13%  Similarity=0.148  Sum_probs=59.9

Q ss_pred             CEEEEEcCChHHHHHHHHHHHcCCeEEEEeCCchhHHHHHHHcCCCEEe-cCCCHHHHHHhc-CCccEEEEcCCCccc--
Q 018067          185 MHVGVVGLGGLGHVAVKFAKAMGVKVTVISTSPSKKSEAIERLGADSFL-VSRDQDEMQAAM-GTMDGIIDTVSAVHP--  260 (361)
Q Consensus       185 ~~vlV~Gag~vG~~a~~la~~~g~~vi~~~~~~~~~~~~~~~~g~~~vv-~~~~~~~~~~~~-~g~d~vid~~g~~~~--  260 (361)
                      ++++|.|.|.+|+.++..++  +..+++++.++++.+.+ +..|...+. |..+++.++++. ..++.++-+...+..  
T Consensus         1 kHivI~G~g~~g~~l~~~L~--~~~i~vi~~d~~~~~~~-~~~~~~~i~Gd~~~~~~L~~a~i~~A~~vi~~~~~d~~n~   77 (129)
T d2fy8a1           1 RHVVICGWSESTLECLRELR--GSEVFVLAEDENVRKKV-LRSGANFVHGDPTRVSDLEKANVRGARAVIVNLESDSETI   77 (129)
T ss_dssp             CCEEEESCCHHHHHHHHTSC--GGGEEEEESCTTHHHHH-HHTTCEEEESCTTSHHHHHHTTCTTCSEEEECCSSHHHHH
T ss_pred             CEEEEECCCHHHHHHHHHHc--CCCCEEEEcchHHHHHH-HhcCccccccccCCHHHHHHhhhhcCcEEEEeccchhhhH
Confidence            35888999999999888775  44677778877776666 566765432 445566666654 478999888776431  


Q ss_pred             -HHHHHhccccCCEEEEec
Q 018067          261 -LMPLIGLLKSQGKLVLVG  278 (361)
Q Consensus       261 -~~~~~~~l~~~G~~v~~g  278 (361)
                       +....+.+.+..+++...
T Consensus        78 ~~~~~~r~~~~~~~iia~~   96 (129)
T d2fy8a1          78 HCILGIRKIDESVRIIAEA   96 (129)
T ss_dssp             HHHHHHHHHCSSSCEEEEC
T ss_pred             HHHHHHHHHCCCceEEEEE
Confidence             222334455666666554

>d1vm6a3 c.2.1.3 (A:1-96,A:183-214) Dihydrodipicolinate reductase {Thermotoga maritima [TaxId: 2336]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Glyceraldehyde-3-phosphate dehydrogenase-like, N-terminal domain
domain: Dihydrodipicolinate reductase
species: Thermotoga maritima [TaxId: 2336]

Probab=90.52  E-value=0.5  Score=34.21  Aligned_cols=94  Identities=19%  Similarity=0.188  Sum_probs=58.7

Q ss_pred             EEEEEcC-ChHHHHHHHHHHHcCCeEEEEeCCchhHHHHHHHcCCCEEecCCCHHHHHHhcCCccEEEEcCCCcccHHHH
Q 018067          186 HVGVVGL-GGLGHVAVKFAKAMGVKVTVISTSPSKKSEAIERLGADSFLVSRDQDEMQAAMGTMDGIIDTVSAVHPLMPL  264 (361)
Q Consensus       186 ~vlV~Ga-g~vG~~a~~la~~~g~~vi~~~~~~~~~~~~~~~~g~~~vv~~~~~~~~~~~~~g~d~vid~~g~~~~~~~~  264 (361)
                      +|.|+|+ |-+|++..+++...+.+++...+....                       .....+|++||++.-.. ....
T Consensus         2 ki~i~G~~GrMG~~i~~~~~~~~~~l~~~id~~~~-----------------------~~~~~~DVvIDFS~p~~-~~~~   57 (128)
T d1vm6a3           2 KYGIVGYSGRMGQEIQKVFSEKGHELVLKVDVNGV-----------------------EELDSPDVVIDFSSPEA-LPKT   57 (128)
T ss_dssp             EEEEETTTSHHHHHHHHHHHHTTCEEEEEEETTEE-----------------------EECSCCSEEEECSCGGG-HHHH
T ss_pred             EEEEECCCCHHHHHHHHHHhcCCCeEEEEECCCcH-----------------------HHhccCCEEEEecCHHH-HHHH
Confidence            5889997 999999999999988877654322110                       01135789999877666 5555


Q ss_pred             HhccccCCEEEEecCCCCC-cccChHHHHhCCcEEEeccc
Q 018067          265 IGLLKSQGKLVLVGAPEKP-LELPAFSLLMGRKIVGGSMI  303 (361)
Q Consensus       265 ~~~l~~~G~~v~~g~~~~~-~~~~~~~~~~~~~~i~g~~~  303 (361)
                      ++.....+.=+.+|..+-. ..+....-+.+.+.+.....
T Consensus        58 l~~~~~~~~p~ViGTTG~~~~~~~~i~~~ak~~pv~~a~N   97 (128)
T d1vm6a3          58 VDLCKKYRAGLVLGTTALKEEHLQMLRELSKEVPVVQAYS   97 (128)
T ss_dssp             HHHHHHHTCEEEECCCSCCHHHHHHHHHHTTTSEEEECSC
T ss_pred             HHHHHhcCCCEEEEcCCCCHHHHHHHHHHHhhCCEEeeec
Confidence            5555555666677765421 22333333456666666554

>d1hwxa1 c.2.1.7 (A:209-501) Glutamate dehydrogenase {Cow (Bos taurus) [TaxId: 9913]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Aminoacid dehydrogenase-like, C-terminal domain
domain: Glutamate dehydrogenase
species: Cow (Bos taurus) [TaxId: 9913]

Probab=90.42  E-value=0.17  Score=42.38  Aligned_cols=35  Identities=20%  Similarity=0.407  Sum_probs=31.8

Q ss_pred             CCCCEEEEEcCChHHHHHHHHHHHcCCeEEEEeCC
Q 018067          182 KPGMHVGVVGLGGLGHVAVKFAKAMGVKVTVISTS  216 (361)
Q Consensus       182 ~~g~~vlV~Gag~vG~~a~~la~~~g~~vi~~~~~  216 (361)
                      -.|.+|+|.|.|.||..+++.+...|++|+.+.++
T Consensus        34 L~gktvaIqGfGnVG~~~A~~L~e~Gakvv~vsD~   68 (293)
T d1hwxa1          34 FGDKTFAVQGFGNVGLHSMRYLHRFGAKCVAVGES   68 (293)
T ss_dssp             STTCEEEEECCSHHHHHHHHHHHHTTCEEEEEEET
T ss_pred             CCCCEEEEECCCHHHHHHHHHHHHCCCEEEEEEcc
Confidence            36899999999999999999999999999988754

>d1y8ca_ c.66.1.43 (A:) Putative methyltransferase CAC2371 {Clostridium acetobutylicum [TaxId: 1488]}

class: Alpha and beta proteins (a/b)
fold: S-adenosyl-L-methionine-dependent methyltransferases
superfamily: S-adenosyl-L-methionine-dependent methyltransferases
family: CAC2371-like
domain: Putative methyltransferase CAC2371
species: Clostridium acetobutylicum [TaxId: 1488]

Probab=90.40  E-value=0.16  Score=41.39  Aligned_cols=92  Identities=15%  Similarity=0.082  Sum_probs=57.0

Q ss_pred             CCCCEEEEEcCChHHHHHHHHHHHcCCeEEEEeCCchhHHHHHH---HcCCCEEecCCCHHHHHHhcCCccEEEEcCCC-
Q 018067          182 KPGMHVGVVGLGGLGHVAVKFAKAMGVKVTVISTSPSKKSEAIE---RLGADSFLVSRDQDEMQAAMGTMDGIIDTVSA-  257 (361)
Q Consensus       182 ~~g~~vlV~Gag~vG~~a~~la~~~g~~vi~~~~~~~~~~~~~~---~~g~~~vv~~~~~~~~~~~~~g~d~vid~~g~-  257 (361)
                      .++++||=+|+|. |..+..+++ .|.+|+.++.+++..+.+.+   ..+.+.-+...+.... ...+.+|+|+-..+. 
T Consensus        36 ~~~~~vLDiGCG~-G~~~~~l~~-~g~~v~GvD~S~~ml~~A~~~~~~~~~~v~~~~~d~~~~-~~~~~fD~i~~~~~~~  112 (246)
T d1y8ca_          36 LVFDDYLDLACGT-GNLTENLCP-KFKNTWAVDLSQEMLSEAENKFRSQGLKPRLACQDISNL-NINRKFDLITCCLDST  112 (246)
T ss_dssp             CCTTEEEEETCTT-STTHHHHGG-GSSEEEEECSCHHHHHHHHHHHHHTTCCCEEECCCGGGC-CCSCCEEEEEECTTGG
T ss_pred             CCCCeEEEEeCcC-CHHHHHHHH-hCCccEeeccchhhhhhccccccccCccceeeccchhhh-cccccccccceeeeee
Confidence            4567899999873 666666666 47899999999876554433   2333311222221111 123479999854332 


Q ss_pred             ---------cccHHHHHhccccCCEEEE
Q 018067          258 ---------VHPLMPLIGLLKSQGKLVL  276 (361)
Q Consensus       258 ---------~~~~~~~~~~l~~~G~~v~  276 (361)
                               ...+..+.+.|+++|.++.
T Consensus       113 ~~~~~~~~~~~~l~~~~~~LkpgG~~i~  140 (246)
T d1y8ca_         113 NYIIDSDDLKKYFKAVSNHLKEGGVFIF  140 (246)
T ss_dssp             GGCCSHHHHHHHHHHHHTTEEEEEEEEE
T ss_pred             eccCCHHHHHHHHHHHHHhCCCCeEEEE
Confidence                     1146678889999999885

>d1a5za1 c.2.1.5 (A:22-163) Lactate dehydrogenase {Thermotoga maritima [TaxId: 2336]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: LDH N-terminal domain-like
domain: Lactate dehydrogenase
species: Thermotoga maritima [TaxId: 2336]

Probab=90.30  E-value=0.77  Score=33.71  Aligned_cols=69  Identities=19%  Similarity=0.248  Sum_probs=42.3

Q ss_pred             EEEEEcCChHHHHHHHHHHHcCC--eEEEEeCCchhHHHHHHHcC------CCEEecCCCHHHHHHhcCCccEEEEcCCC
Q 018067          186 HVGVVGLGGLGHVAVKFAKAMGV--KVTVISTSPSKKSEAIERLG------ADSFLVSRDQDEMQAAMGTMDGIIDTVSA  257 (361)
Q Consensus       186 ~vlV~Gag~vG~~a~~la~~~g~--~vi~~~~~~~~~~~~~~~~g------~~~vv~~~~~~~~~~~~~g~d~vid~~g~  257 (361)
                      +|.|+|+|.+|...+..+...+.  ++..++..+++....+.++-      ....+...+    .+...+.|+|+-++|.
T Consensus         2 KI~IIGaG~VG~~~a~~l~~~~l~~el~L~Di~~~~~~g~~~Dl~~~~~~~~~~~~~~~~----~~~~~~adivvitag~   77 (140)
T d1a5za1           2 KIGIVGLGRVGSSTAFALLMKGFAREMVLIDVDKKRAEGDALDLIHGTPFTRRANIYAGD----YADLKGSDVVIVAAGV   77 (140)
T ss_dssp             EEEEECCSHHHHHHHHHHHHHTCCSEEEEECSSHHHHHHHHHHHHHHGGGSCCCEEEECC----GGGGTTCSEEEECCCC
T ss_pred             EEEEECcCHHHHHHHHHHHhCCCCCEEEEEecccccccchhccccccccccccccccCCc----HHHhcCCCEEEEeccc
Confidence            57889999999998887777664  78888877655433322221      011111111    1223578999988876


Q ss_pred             c
Q 018067          258 V  258 (361)
Q Consensus       258 ~  258 (361)
                      +
T Consensus        78 ~   78 (140)
T d1a5za1          78 P   78 (140)
T ss_dssp             C
T ss_pred             c
Confidence            3

>d1w4xa1 c.3.1.5 (A:10-154,A:390-542) Phenylacetone monooxygenase {Thermobifida fusca [TaxId: 2021]}

class: Alpha and beta proteins (a/b)
fold: FAD/NAD(P)-binding domain
superfamily: FAD/NAD(P)-binding domain
family: FAD/NAD-linked reductases, N-terminal and central domains
domain: Phenylacetone monooxygenase
species: Thermobifida fusca [TaxId: 2021]

Probab=90.25  E-value=0.15  Score=43.17  Aligned_cols=32  Identities=38%  Similarity=0.367  Sum_probs=29.0

Q ss_pred             EEEEEcCChHHHHHHHHHHHcCCeEEEEeCCc
Q 018067          186 HVGVVGLGGLGHVAVKFAKAMGVKVTVISTSP  217 (361)
Q Consensus       186 ~vlV~Gag~vG~~a~~la~~~g~~vi~~~~~~  217 (361)
                      .|+|+|||..|++++..++..|.+++++...+
T Consensus         9 dV~IIGAG~sGl~~a~~L~~~G~~v~i~Ek~~   40 (298)
T d1w4xa1           9 DVLVVGAGFSGLYALYRLRELGRSVHVIETAG   40 (298)
T ss_dssp             EEEEECCSHHHHHHHHHHHHTTCCEEEECSSS
T ss_pred             CEEEECccHHHHHHHHHHHhCCCCEEEEEcCC
Confidence            48899999999999999999999999988754

>d1oria_ c.66.1.6 (A:) Protein arginine N-methyltransferase 1, PRMT1 {Rat (Rattus norvegicus) [TaxId: 10116]}

class: Alpha and beta proteins (a/b)
fold: S-adenosyl-L-methionine-dependent methyltransferases
superfamily: S-adenosyl-L-methionine-dependent methyltransferases
family: Arginine methyltransferase
domain: Protein arginine N-methyltransferase 1, PRMT1
species: Rat (Rattus norvegicus) [TaxId: 10116]

Probab=90.19  E-value=0.14  Score=43.63  Aligned_cols=92  Identities=22%  Similarity=0.170  Sum_probs=51.2

Q ss_pred             CCCCCEEEEEcCChHHHHHHHHHHHcCC-eEEEEeCCchhH--HHHHHHcCCC---EEecCCCHHHHHHhcCCccEEEEc
Q 018067          181 DKPGMHVGVVGLGGLGHVAVKFAKAMGV-KVTVISTSPSKK--SEAIERLGAD---SFLVSRDQDEMQAAMGTMDGIIDT  254 (361)
Q Consensus       181 ~~~g~~vlV~Gag~vG~~a~~la~~~g~-~vi~~~~~~~~~--~~~~~~~g~~---~vv~~~~~~~~~~~~~g~d~vid~  254 (361)
                      +.+|++||-+|+|. |.+++.+|+ .|+ +|+.++.++.-.  .+.++..+..   .++.... ..+....+.+|+|+..
T Consensus        31 ~~~~~~VLDiGcG~-G~ls~~aa~-~Ga~~V~avd~s~~~~~a~~~~~~n~~~~~v~~~~~~~-~~~~~~~~~~D~ivs~  107 (316)
T d1oria_          31 LFKDKVVLDVGSGT-GILCMFAAK-AGARKVIGIECSSISDYAVKIVKANKLDHVVTIIKGKV-EEVELPVEKVDIIISE  107 (316)
T ss_dssp             HHTTCEEEEETCTT-SHHHHHHHH-TTCSEEEEEECSTTHHHHHHHHHHTTCTTTEEEEESCT-TTCCCSSSCEEEEEEC
T ss_pred             cCCcCEEEEEecCC-cHHHHHHHH-hCCCEEEEEcCcHHHhhhhhHHHHhCCccccceEeccH-HHcccccceeEEEeee
Confidence            46899999999875 777666666 476 798888765321  1222333431   1222111 1111112468998653


Q ss_pred             CCC-----c----ccHHHHHhccccCCEEE
Q 018067          255 VSA-----V----HPLMPLIGLLKSQGKLV  275 (361)
Q Consensus       255 ~g~-----~----~~~~~~~~~l~~~G~~v  275 (361)
                      ...     +    ..+....+.|+|+|+++
T Consensus       108 ~~~~~l~~e~~~~~~l~~~~r~Lkp~G~ii  137 (316)
T d1oria_         108 WMGYCLFYESMLNTVLHARDKWLAPDGLIF  137 (316)
T ss_dssp             CCBBTBTBTCCHHHHHHHHHHHEEEEEEEE
T ss_pred             eeeeeeccHHHHHHHHHHHHhcCCCCeEEE
Confidence            221     1    12334557899999876

>d2o07a1 c.66.1.17 (A:16-300) Spermidine synthase {Human (Homo sapiens) [TaxId: 9606]}

class: Alpha and beta proteins (a/b)
fold: S-adenosyl-L-methionine-dependent methyltransferases
superfamily: S-adenosyl-L-methionine-dependent methyltransferases
family: Spermidine synthase
domain: Spermidine synthase
species: Human (Homo sapiens) [TaxId: 9606]

Probab=90.18  E-value=0.31  Score=40.78  Aligned_cols=95  Identities=20%  Similarity=0.191  Sum_probs=55.8

Q ss_pred             CCCCEEEEEcCChHHHHHHHHHHHcCC-eEEEEeCCchhHHHHHHHcC---------CC-EEecCCCHHHHHHhcCCccE
Q 018067          182 KPGMHVGVVGLGGLGHVAVKFAKAMGV-KVTVISTSPSKKSEAIERLG---------AD-SFLVSRDQDEMQAAMGTMDG  250 (361)
Q Consensus       182 ~~g~~vlV~Gag~vG~~a~~la~~~g~-~vi~~~~~~~~~~~~~~~~g---------~~-~vv~~~~~~~~~~~~~g~d~  250 (361)
                      ...++|||+|+|. |..+-.+++..+. ++.++.- +...-++++++-         .. .++..+....++...+.+|+
T Consensus        77 ~~pk~vLiiGgG~-G~~~~~~l~~~~~~~v~~vEi-D~~Vv~~a~~~~~~~~~~~~d~rv~i~~~Da~~~l~~~~~~yDv  154 (285)
T d2o07a1          77 PNPRKVLIIGGGD-GGVLREVVKHPSVESVVQCEI-DEDVIQVSKKFLPGMAIGYSSSKLTLHVGDGFEFMKQNQDAFDV  154 (285)
T ss_dssp             SSCCEEEEEECTT-SHHHHHHTTCTTCCEEEEEES-CHHHHHHHHHHCHHHHGGGGCTTEEEEESCHHHHHHTCSSCEEE
T ss_pred             cCcCeEEEeCCCc-hHHHHHHHHcCCcceeeeccC-CHHHHHHHHhhchhhccccCCCCceEEEccHHHHHhcCCCCCCE
Confidence            5668899998754 4556667777665 5655544 444555555442         11 22222223455544557999


Q ss_pred             EE-EcCC---------CcccHHHHHhccccCCEEEEec
Q 018067          251 II-DTVS---------AVHPLMPLIGLLKSQGKLVLVG  278 (361)
Q Consensus       251 vi-d~~g---------~~~~~~~~~~~l~~~G~~v~~g  278 (361)
                      || |...         +...++.+.+.|+++|.++.-.
T Consensus       155 Ii~D~~~p~~~~~~L~t~eF~~~~~~~L~~~Gi~v~q~  192 (285)
T d2o07a1         155 IITDSSDPMGPAESLFKESYYQLMKTALKEDGVLCCQG  192 (285)
T ss_dssp             EEEECC-----------CHHHHHHHHHEEEEEEEEEEE
T ss_pred             EEEcCCCCCCcccccccHHHHHHHHHhcCCCCeEEEec
Confidence            85 4322         1123667888999999988753

>d1d7oa_ c.2.1.2 (A:) Enoyl-ACP reductase {Oil seed rape (Brassica napus) [TaxId: 3708]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Tyrosine-dependent oxidoreductases
domain: Enoyl-ACP reductase
species: Oil seed rape (Brassica napus) [TaxId: 3708]

Probab=90.10  E-value=0.18  Score=42.31  Aligned_cols=36  Identities=25%  Similarity=0.372  Sum_probs=31.7

Q ss_pred             CCCEEEEEcC-C--hHHHHHHHHHHHcCCeEEEEeCCch
Q 018067          183 PGMHVGVVGL-G--GLGHVAVKFAKAMGVKVTVISTSPS  218 (361)
Q Consensus       183 ~g~~vlV~Ga-g--~vG~~a~~la~~~g~~vi~~~~~~~  218 (361)
                      +|+++||.|+ |  +||.++++.+...|++|++..+++.
T Consensus         7 ~gK~alVTGass~~GIG~aiA~~la~~Ga~Vvi~~~~~~   45 (297)
T d1d7oa_           7 RGKRAFIAGIADDNGYGWAVAKSLAAAGAEILVGTWVPA   45 (297)
T ss_dssp             TTCEEEEECCSSSSSHHHHHHHHHHHTTCEEEEEEEHHH
T ss_pred             CCCEEEEECCCCCchHHHHHHHHHHHCCCEEEEEeCchh
Confidence            6899999997 4  7999999999999999998887653

>d1gesa1 c.3.1.5 (A:3-146,A:263-335) Glutathione reductase {Escherichia coli [TaxId: 562]}

class: Alpha and beta proteins (a/b)
fold: FAD/NAD(P)-binding domain
superfamily: FAD/NAD(P)-binding domain
family: FAD/NAD-linked reductases, N-terminal and central domains
domain: Glutathione reductase
species: Escherichia coli [TaxId: 562]

Probab=90.04  E-value=0.15  Score=40.55  Aligned_cols=30  Identities=23%  Similarity=0.284  Sum_probs=27.9

Q ss_pred             EEEEcCChHHHHHHHHHHHcCCeEEEEeCC
Q 018067          187 VGVVGLGGLGHVAVKFAKAMGVKVTVISTS  216 (361)
Q Consensus       187 vlV~Gag~vG~~a~~la~~~g~~vi~~~~~  216 (361)
                      |+|+|+|+.|+.++..|..+|.+|.++...
T Consensus         5 vvVIG~G~aG~~aA~~a~~~G~kV~iiE~~   34 (217)
T d1gesa1           5 YIAIGGGSGGIASINRAAMYGQKCALIEAK   34 (217)
T ss_dssp             EEEECCSHHHHHHHHHHHTTTCCEEEEESS
T ss_pred             EEEECCCHHHHHHHHHHHHCCCEEEEEecc
Confidence            789999999999999999999999999764

>d1xj5a_ c.66.1.17 (A:) Spermidine synthase {Thale cress (Arabidopsis thaliana) [TaxId: 3702]}

class: Alpha and beta proteins (a/b)
fold: S-adenosyl-L-methionine-dependent methyltransferases
superfamily: S-adenosyl-L-methionine-dependent methyltransferases
family: Spermidine synthase
domain: Spermidine synthase
species: Thale cress (Arabidopsis thaliana) [TaxId: 3702]

Probab=90.00  E-value=0.4  Score=40.17  Aligned_cols=95  Identities=14%  Similarity=0.202  Sum_probs=57.9

Q ss_pred             CCCCEEEEEcCChHHHHHHHHHHHcCC-eEEEEeCCchhHHHHHHHcC---------CC-EEecCCCHHHHHHhcC-Ccc
Q 018067          182 KPGMHVGVVGLGGLGHVAVKFAKAMGV-KVTVISTSPSKKSEAIERLG---------AD-SFLVSRDQDEMQAAMG-TMD  249 (361)
Q Consensus       182 ~~g~~vlV~Gag~vG~~a~~la~~~g~-~vi~~~~~~~~~~~~~~~~g---------~~-~vv~~~~~~~~~~~~~-g~d  249 (361)
                      ...++|||+|+|. |.++-.+++..+. ++.++.-+ +..-++++++-         .. .++..+..+.+....+ .+|
T Consensus        79 ~~pk~VLiiGgG~-G~~~r~~l~~~~~~~i~~VEiD-~~Vi~~~~~~f~~~~~~~~~~r~~i~~~Da~~~l~~~~~~~yD  156 (290)
T d1xj5a_          79 PNPKKVLVIGGGD-GGVLREVARHASIEQIDMCEID-KMVVDVSKQFFPDVAIGYEDPRVNLVIGDGVAFLKNAAEGSYD  156 (290)
T ss_dssp             SCCCEEEEETCSS-SHHHHHHTTCTTCCEEEEEESC-HHHHHHHHHHCHHHHGGGGSTTEEEEESCHHHHHHTSCTTCEE
T ss_pred             CCCcceEEecCCc-hHHHHHHHhcccceeeEEecCC-HHHHHHHHHhchhhhccccCCCcEEEEccHHHHHhhccccCcc
Confidence            4567899998754 5555677777776 55555554 45555555542         11 2222233355555544 799


Q ss_pred             EEE-EcCCC---------cccHHHHHhccccCCEEEEec
Q 018067          250 GII-DTVSA---------VHPLMPLIGLLKSQGKLVLVG  278 (361)
Q Consensus       250 ~vi-d~~g~---------~~~~~~~~~~l~~~G~~v~~g  278 (361)
                      +|| |+...         ...++.+.+.|+++|.++.-.
T Consensus       157 vIi~D~~dp~~~~~~L~t~eF~~~~~~~L~~~Gi~v~q~  195 (290)
T d1xj5a_         157 AVIVDSSDPIGPAKELFEKPFFQSVARALRPGGVVCTQA  195 (290)
T ss_dssp             EEEECCCCTTSGGGGGGSHHHHHHHHHHEEEEEEEEEEC
T ss_pred             EEEEcCCCCCCcchhhCCHHHHHHHHHhcCCCcEEEEec
Confidence            875 43321         223678889999999998764

>d1ryia1 c.3.1.2 (A:1-218,A:307-364) Glycine oxidase ThiO {Bacillus sp. [TaxId: 1409]}

class: Alpha and beta proteins (a/b)
fold: FAD/NAD(P)-binding domain
superfamily: FAD/NAD(P)-binding domain
family: FAD-linked reductases, N-terminal domain
domain: Glycine oxidase ThiO
species: Bacillus sp. [TaxId: 1409]

Probab=90.00  E-value=0.15  Score=42.03  Aligned_cols=32  Identities=13%  Similarity=0.217  Sum_probs=29.0

Q ss_pred             EEEEEcCChHHHHHHHHHHHcCCeEEEEeCCc
Q 018067          186 HVGVVGLGGLGHVAVKFAKAMGVKVTVISTSP  217 (361)
Q Consensus       186 ~vlV~Gag~vG~~a~~la~~~g~~vi~~~~~~  217 (361)
                      .|+|+|+|.+|++++..+...|.+|+++++.+
T Consensus         6 DvvIIGaGi~Gls~A~~La~~G~~V~vlE~~~   37 (276)
T d1ryia1           6 EAVVIGGGIIGSAIAYYLAKENKNTALFESGT   37 (276)
T ss_dssp             EEEEECCSHHHHHHHHHHHHTTCCEEEECSSS
T ss_pred             CEEEECcCHHHHHHHHHHHHCCCcEEEEeCCC
Confidence            48999999999999999999999999998754

>d1v59a1 c.3.1.5 (A:1-160,A:283-355) Dihydrolipoamide dehydrogenase {Baker's yeast (Saccharomyces cerevisiae) [TaxId: 4932]}

class: Alpha and beta proteins (a/b)
fold: FAD/NAD(P)-binding domain
superfamily: FAD/NAD(P)-binding domain
family: FAD/NAD-linked reductases, N-terminal and central domains
domain: Dihydrolipoamide dehydrogenase
species: Baker's yeast (Saccharomyces cerevisiae) [TaxId: 4932]

Probab=89.95  E-value=0.16  Score=40.57  Aligned_cols=31  Identities=26%  Similarity=0.340  Sum_probs=28.2

Q ss_pred             EEEEcCChHHHHHHHHHHHcCCeEEEEeCCc
Q 018067          187 VGVVGLGGLGHVAVKFAKAMGVKVTVISTSP  217 (361)
Q Consensus       187 vlV~Gag~vG~~a~~la~~~g~~vi~~~~~~  217 (361)
                      |+|+|+|+.|+.++..|...|.+|.++...+
T Consensus         8 viVIG~GpAGl~aA~~aa~~G~kV~lie~~~   38 (233)
T d1v59a1           8 VVIIGGGPAGYVAAIKAAQLGFNTACVEKRG   38 (233)
T ss_dssp             EEEECCSHHHHHHHHHHHHTTCCEEEEESSS
T ss_pred             EEEECCCHHHHHHHHHHHHCCCcEEEEEecC
Confidence            7889999999999999999999999998653

>d1h6da1 c.2.1.3 (A:51-212,A:375-433) Glucose-fructose oxidoreductase, N-terminal domain {Zymomonas mobilis [TaxId: 542]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Glyceraldehyde-3-phosphate dehydrogenase-like, N-terminal domain
domain: Glucose-fructose oxidoreductase, N-terminal domain
species: Zymomonas mobilis [TaxId: 542]

Probab=89.94  E-value=0.44  Score=38.09  Aligned_cols=92  Identities=16%  Similarity=0.177  Sum_probs=58.6

Q ss_pred             CEEEEEcCChHHH-HHHHHHHHc-CCeEEEEe-CCchhHHHHHHHcCCC--EEecCCCHHHHHHhc-CCccEEEEcCCCc
Q 018067          185 MHVGVVGLGGLGH-VAVKFAKAM-GVKVTVIS-TSPSKKSEAIERLGAD--SFLVSRDQDEMQAAM-GTMDGIIDTVSAV  258 (361)
Q Consensus       185 ~~vlV~Gag~vG~-~a~~la~~~-g~~vi~~~-~~~~~~~~~~~~~g~~--~vv~~~~~~~~~~~~-~g~d~vid~~g~~  258 (361)
                      =+|.|+|+|.+|. ..+...+.. +++++.++ ++.++.+.+++++|..  .+..+++-+.+  +. ..+|+|+-++...
T Consensus        34 iriaiIG~G~~~~~~~~~~~~~~~~~~ivav~d~~~~~a~~~~~~~~i~~~~~~~~~d~~el--l~~~~iD~V~I~tp~~  111 (221)
T d1h6da1          34 FGYAIVGLGKYALNQILPGFAGCQHSRIEALVSGNAEKAKIVAAEYGVDPRKIYDYSNFDKI--AKDPKIDAVYIILPNS  111 (221)
T ss_dssp             EEEEEECCSHHHHHTHHHHTTTCSSEEEEEEECSCHHHHHHHHHHTTCCGGGEECSSSGGGG--GGCTTCCEEEECSCGG
T ss_pred             EEEEEEcCcHHHHHHHHHHHHhCCCceEEEEecCCHHHHHHHHHhhccccccccccCchhhh--cccccceeeeeccchh
Confidence            3688899999996 344444443 67887554 5667778888888863  23334443321  22 3799998888775


Q ss_pred             ccHHHHHhccccCCEEEEecC
Q 018067          259 HPLMPLIGLLKSQGKLVLVGA  279 (361)
Q Consensus       259 ~~~~~~~~~l~~~G~~v~~g~  279 (361)
                      .-...+.++++. |.-+.+.-
T Consensus       112 ~H~~~~~~al~~-gk~v~~EK  131 (221)
T d1h6da1         112 LHAEFAIRAFKA-GKHVMCEK  131 (221)
T ss_dssp             GHHHHHHHHHHT-TCEEEECS
T ss_pred             hhhhHHHHhhhc-chhhhcCC
Confidence            436667777765 45666643

>d1jw9b_ c.111.1.1 (B:) Molybdenum cofactor biosynthesis protein MoeB {Escherichia coli [TaxId: 562]}

class: Alpha and beta proteins (a/b)
fold: Activating enzymes of the ubiquitin-like proteins
superfamily: Activating enzymes of the ubiquitin-like proteins
family: Molybdenum cofactor biosynthesis protein MoeB
domain: Molybdenum cofactor biosynthesis protein MoeB
species: Escherichia coli [TaxId: 562]

Probab=89.89  E-value=0.24  Score=40.41  Aligned_cols=32  Identities=38%  Similarity=0.655  Sum_probs=27.5

Q ss_pred             CCEEEEEcCChHHHHHHHHHHHcCC-eEEEEeC
Q 018067          184 GMHVGVVGLGGLGHVAVKFAKAMGV-KVTVIST  215 (361)
Q Consensus       184 g~~vlV~Gag~vG~~a~~la~~~g~-~vi~~~~  215 (361)
                      ..+|+|+|+|++|-.++..+-..|. ++++++.
T Consensus        30 ~~~VliiG~GglGs~va~~La~~Gvg~i~lvD~   62 (247)
T d1jw9b_          30 DSRVLIVGLGGLGCAASQYLASAGVGNLTLLDF   62 (247)
T ss_dssp             HCEEEEECCSHHHHHHHHHHHHHTCSEEEEECC
T ss_pred             CCCEEEECCCHHHHHHHHHHHHcCCCeEEEECC
Confidence            4789999999999999999999999 6666653

>d1nw3a_ c.66.1.31 (A:) Catalytic, N-terminal domain of histone methyltransferase Dot1l {Human (Homo sapiens) [TaxId: 9606]}

class: Alpha and beta proteins (a/b)
fold: S-adenosyl-L-methionine-dependent methyltransferases
superfamily: S-adenosyl-L-methionine-dependent methyltransferases
family: Catalytic, N-terminal domain of histone methyltransferase Dot1l
domain: Catalytic, N-terminal domain of histone methyltransferase Dot1l
species: Human (Homo sapiens) [TaxId: 9606]

Probab=89.87  E-value=1.2  Score=37.85  Aligned_cols=103  Identities=14%  Similarity=0.058  Sum_probs=61.7

Q ss_pred             hHhhhcCCCCCCCEEEEEcCChHHHHHHHHHHHcCC-eEEEEeCCchhHHHHH----------HHcCCC----EEec--C
Q 018067          173 SPLRFYGLDKPGMHVGVVGLGGLGHVAVKFAKAMGV-KVTVISTSPSKKSEAI----------ERLGAD----SFLV--S  235 (361)
Q Consensus       173 ~~l~~~~~~~~g~~vlV~Gag~vG~~a~~la~~~g~-~vi~~~~~~~~~~~~~----------~~~g~~----~vv~--~  235 (361)
                      ..+.. ..++++++|+=+|+|. |..+.++|+..++ +++.++-+++....+.          +.+|..    .++.  .
T Consensus       142 ~~~~~-~~l~~~~~vlD~GcG~-G~~~~~~a~~~~~~~~~Gid~s~~~~~~a~~~~~~~~~~~~~~g~~~~~i~~~~gd~  219 (328)
T d1nw3a_         142 QMIDE-IKMTDDDLFVDLGSGV-GQVVLQVAAATNCKHHYGVEKADIPAKYAETMDREFRKWMKWYGKKHAEYTLERGDF  219 (328)
T ss_dssp             HHHHH-SCCCTTCEEEEETCTT-SHHHHHHHHHCCCSEEEEEECSHHHHHHHHHHHHHHHHHHHHHTCCCCCEEEEECCT
T ss_pred             HHHHH-cCCCCCCEEEEcCCCC-CHHHHHHHHHhCCCeEEEEeCCHHHHHHHHHHHHHHHHHhhhccccCCceEEEECcc
Confidence            34444 4589999888899874 8888899999887 7999988875432221          122321    1221  1


Q ss_pred             CCHHHHHHhcCCccEEEEc-CCC-c---ccHHHHHhccccCCEEEEec
Q 018067          236 RDQDEMQAAMGTMDGIIDT-VSA-V---HPLMPLIGLLKSQGKLVLVG  278 (361)
Q Consensus       236 ~~~~~~~~~~~g~d~vid~-~g~-~---~~~~~~~~~l~~~G~~v~~g  278 (361)
                      .+.+. ......+|+|+-. .-. +   ..+...++.|++||++|..-
T Consensus       220 ~~~~~-~~~~~~advi~~~~~~f~~~~~~~l~e~~r~LKpGg~iv~~~  266 (328)
T d1nw3a_         220 LSEEW-RERIANTSVIFVNNFAFGPEVDHQLKERFANMKEGGRIVSSK  266 (328)
T ss_dssp             TSHHH-HHHHHHCSEEEECCTTTCHHHHHHHHHHHTTCCTTCEEEESS
T ss_pred             ccccc-ccccCcceEEEEcceecchHHHHHHHHHHHhCCCCcEEEEec
Confidence            12221 1111236787642 211 1   23566888899999999764

>d1t4ba1 c.2.1.3 (A:1-133,A:355-367) Aspartate beta-semialdehyde dehydrogenase {Escherichia coli [TaxId: 562]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Glyceraldehyde-3-phosphate dehydrogenase-like, N-terminal domain
domain: Aspartate beta-semialdehyde dehydrogenase
species: Escherichia coli [TaxId: 562]

Probab=89.80  E-value=0.28  Score=36.57  Aligned_cols=90  Identities=17%  Similarity=0.150  Sum_probs=50.4

Q ss_pred             EEEEEcC-ChHHHHHHHH-HHHcC---CeEEEEeCCchhHHHHHHHcCCCEEecCCCHHHHHHhcCCccEEEEcCCCccc
Q 018067          186 HVGVVGL-GGLGHVAVKF-AKAMG---VKVTVISTSPSKKSEAIERLGADSFLVSRDQDEMQAAMGTMDGIIDTVSAVHP  260 (361)
Q Consensus       186 ~vlV~Ga-g~vG~~a~~l-a~~~g---~~vi~~~~~~~~~~~~~~~~g~~~vv~~~~~~~~~~~~~g~d~vid~~g~~~~  260 (361)
                      +|.|+|| |.+|+-.+++ +.+..   .+++...++...............+.+..+.+.    ..++|++|-++++...
T Consensus         3 kVaIvGATG~VGqeli~~Ll~~~~~p~~~l~~~~ss~s~g~~~~~~~~~~~~~~~~~~~~----~~~~DivF~a~~~~~s   78 (146)
T d1t4ba1           3 NVGFIGWRGMVGSVLMQRMVEERDFDAIRPVFFSTSQLGQAAPSFGGTTGTLQDAFDLEA----LKALDIIVTCQGGDYT   78 (146)
T ss_dssp             EEEEESTTSHHHHHHHHHHHHTTGGGGSEEEEEESSSTTSBCCGGGTCCCBCEETTCHHH----HHTCSEEEECSCHHHH
T ss_pred             EEEEECCccHHHHHHHHHHHhCCCCCeeEEEEeeccccccccccccCCceeeecccchhh----hhcCcEEEEecCchHH
Confidence            6889998 9999999974 44332   366666555432211100001111122222211    2479999999998874


Q ss_pred             HHHHHhccccC--CEEEEecC
Q 018067          261 LMPLIGLLKSQ--GKLVLVGA  279 (361)
Q Consensus       261 ~~~~~~~l~~~--G~~v~~g~  279 (361)
                      ..........+  ..+++.+.
T Consensus        79 ~~~~~~~~~~g~~~~VID~Ss   99 (146)
T d1t4ba1          79 NEIYPKLRESGWQGYWIDAAS   99 (146)
T ss_dssp             HHHHHHHHHTTCCCEEEECSS
T ss_pred             HHhhHHHHhcCCCeecccCCc
Confidence            45555555554  34777765

>d1ojta1 c.3.1.5 (A:117-275,A:401-470) Dihydrolipoamide dehydrogenase {Neisseria meningitidis [TaxId: 487]}

class: Alpha and beta proteins (a/b)
fold: FAD/NAD(P)-binding domain
superfamily: FAD/NAD(P)-binding domain
family: FAD/NAD-linked reductases, N-terminal and central domains
domain: Dihydrolipoamide dehydrogenase
species: Neisseria meningitidis [TaxId: 487]

Probab=89.75  E-value=0.18  Score=40.53  Aligned_cols=31  Identities=32%  Similarity=0.296  Sum_probs=28.4

Q ss_pred             EEEEcCChHHHHHHHHHHHcCCeEEEEeCCc
Q 018067          187 VGVVGLGGLGHVAVKFAKAMGVKVTVISTSP  217 (361)
Q Consensus       187 vlV~Gag~vG~~a~~la~~~g~~vi~~~~~~  217 (361)
                      |+|+|+|+.|+.++..|...|.+|.++...+
T Consensus         9 viIIG~GPaGlsaA~~aa~~G~~V~viE~~~   39 (229)
T d1ojta1           9 VVVLGGGPGGYSAAFAAADEGLKVAIVERYK   39 (229)
T ss_dssp             EEEECCSHHHHHHHHHHHHTTCCEEEEESSS
T ss_pred             EEEECcCHHHHHHHHHHHHCCCeEEEEeccC
Confidence            7889999999999999999999999997654

>d2frna1 c.66.1.47 (A:19-278) Hypothetical protein PH0793 {Pyrococcus horikoshii [TaxId: 53953]}

class: Alpha and beta proteins (a/b)
fold: S-adenosyl-L-methionine-dependent methyltransferases
superfamily: S-adenosyl-L-methionine-dependent methyltransferases
family: Met-10+ protein-like
domain: Hypothetical protein PH0793
species: Pyrococcus horikoshii [TaxId: 53953]

Probab=89.68  E-value=0.12  Score=42.79  Aligned_cols=94  Identities=19%  Similarity=0.103  Sum_probs=56.1

Q ss_pred             CCCCCEEEEEcCChHHHHHHHHHHHcCCeEEEEeCCchhHHHH---HHHcCCC---EEecCCCHHHHHHhcCCccEEE-E
Q 018067          181 DKPGMHVGVVGLGGLGHVAVKFAKAMGVKVTVISTSPSKKSEA---IERLGAD---SFLVSRDQDEMQAAMGTMDGII-D  253 (361)
Q Consensus       181 ~~~g~~vlV~Gag~vG~~a~~la~~~g~~vi~~~~~~~~~~~~---~~~~g~~---~vv~~~~~~~~~~~~~g~d~vi-d  253 (361)
                      +++|++||-.|+|. |..++.+|+.-+++|+.++.+++....+   ++..|.+   .++..+..+..  ..+.+|.|+ +
T Consensus       105 ~~~g~~VlD~~aG~-G~~~l~~a~~~~~~V~avd~n~~a~~~~~~N~~~n~l~~~v~~~~~D~~~~~--~~~~~D~Ii~~  181 (260)
T d2frna1         105 AKPDELVVDMFAGI-GHLSLPIAVYGKAKVIAIEKDPYTFKFLVENIHLNKVEDRMSAYNMDNRDFP--GENIADRILMG  181 (260)
T ss_dssp             CCTTCEEEETTCTT-TTTHHHHHHHTCCEEEEECCCHHHHHHHHHHHHHTTCTTTEEEECSCTTTCC--CCSCEEEEEEC
T ss_pred             cCCccEEEECcceE-cHHHHHHHHhCCcEEEEecCCHHHHHHHHHHHHHhCCCceEEEEEcchHHhc--cCCCCCEEEEC
Confidence            58999999987642 4445566666456999999998765444   2333432   22222211110  013588665 3


Q ss_pred             cC-CCcccHHHHHhccccCCEEEEe
Q 018067          254 TV-SAVHPLMPLIGLLKSQGKLVLV  277 (361)
Q Consensus       254 ~~-g~~~~~~~~~~~l~~~G~~v~~  277 (361)
                      .. .+...+..+++.+++||.+...
T Consensus       182 ~p~~~~~~l~~a~~~l~~gG~lh~~  206 (260)
T d2frna1         182 YVVRTHEFIPKALSIAKDGAIIHYH  206 (260)
T ss_dssp             CCSSGGGGHHHHHHHEEEEEEEEEE
T ss_pred             CCCchHHHHHHHHhhcCCCCEEEEE
Confidence            22 3344577899999999987554

>d1ri5a_ c.66.1.34 (A:) mRNA cap (Guanine N-7) methyltransferase {Fungus (Encephalitozoon cuniculi) [TaxId: 6035]}

class: Alpha and beta proteins (a/b)
fold: S-adenosyl-L-methionine-dependent methyltransferases
superfamily: S-adenosyl-L-methionine-dependent methyltransferases
family: mRNA cap (Guanine N-7) methyltransferase
domain: mRNA cap (Guanine N-7) methyltransferase
species: Fungus (Encephalitozoon cuniculi) [TaxId: 6035]

Probab=89.49  E-value=0.24  Score=40.42  Aligned_cols=96  Identities=17%  Similarity=0.130  Sum_probs=58.7

Q ss_pred             CCCCCEEEEEcCChHHHHHHHHHHHcCCeEEEEeCCchhHHHHHHH---cCCC-EE-ecCCCH-HHHHHhcCCccEEEEc
Q 018067          181 DKPGMHVGVVGLGGLGHVAVKFAKAMGVKVTVISTSPSKKSEAIER---LGAD-SF-LVSRDQ-DEMQAAMGTMDGIIDT  254 (361)
Q Consensus       181 ~~~g~~vlV~Gag~vG~~a~~la~~~g~~vi~~~~~~~~~~~~~~~---~g~~-~v-v~~~~~-~~~~~~~~g~d~vid~  254 (361)
                      ++++++||=+|+|. |..+..+++.-..+|+.++-+++....+.++   .+.. .+ +-..+. .......+.+|+|+-.
T Consensus        22 ~~~~~~VLDlGCG~-G~~~~~~~~~~~~~v~GiD~S~~~l~~A~~r~~~~~~~~~v~f~~~D~~~~~~~~~~~fD~V~~~  100 (252)
T d1ri5a_          22 TKRGDSVLDLGCGK-GGDLLKYERAGIGEYYGVDIAEVSINDARVRARNMKRRFKVFFRAQDSYGRHMDLGKEFDVISSQ  100 (252)
T ss_dssp             CCTTCEEEEETCTT-TTTHHHHHHHTCSEEEEEESCHHHHHHHHHHHHTSCCSSEEEEEESCTTTSCCCCSSCEEEEEEE
T ss_pred             CCCcCEEEEecccC-cHHHHHHHHcCCCeEEEecCCHHHHHHHHHHHHhcCCCcceEEEEcchhhhcccccccceEEEEc
Confidence            47899999999875 5566777776555899999998876666433   2321 11 111110 0000112369998764


Q ss_pred             CCCc----------ccHHHHHhccccCCEEEEe
Q 018067          255 VSAV----------HPLMPLIGLLKSQGKLVLV  277 (361)
Q Consensus       255 ~g~~----------~~~~~~~~~l~~~G~~v~~  277 (361)
                      -.-.          ..+..+.+.|++||.++..
T Consensus       101 ~~l~~~~~~~~~~~~~l~~i~~~Lk~gG~~i~~  133 (252)
T d1ri5a_         101 FSFHYAFSTSESLDIAQRNIARHLRPGGYFIMT  133 (252)
T ss_dssp             SCGGGGGSSHHHHHHHHHHHHHTEEEEEEEEEE
T ss_pred             ceeeecCCCHHHHHHHHHHHhceeCCCCEEEEE
Confidence            4322          1345577899999998764

>d1y6ja1 c.2.1.5 (A:7-148) Lactate dehydrogenase {Clostridium thermocellum [TaxId: 1515]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: LDH N-terminal domain-like
domain: Lactate dehydrogenase
species: Clostridium thermocellum [TaxId: 1515]

Probab=89.47  E-value=0.21  Score=37.06  Aligned_cols=69  Identities=19%  Similarity=0.171  Sum_probs=41.6

Q ss_pred             EEEEEcCChHHHHHHHHHHHcCC--eEEEEeCCchhHHHHHHHcC-C-----CEEecCCCHHHHHHhcCCccEEEEcCCC
Q 018067          186 HVGVVGLGGLGHVAVKFAKAMGV--KVTVISTSPSKKSEAIERLG-A-----DSFLVSRDQDEMQAAMGTMDGIIDTVSA  257 (361)
Q Consensus       186 ~vlV~Gag~vG~~a~~la~~~g~--~vi~~~~~~~~~~~~~~~~g-~-----~~vv~~~~~~~~~~~~~g~d~vid~~g~  257 (361)
                      +|.|+|+|.+|...+..+...+.  ++.+++..+++....+.++- +     ...+...+    .+...+.|+|+-++|.
T Consensus         3 KI~IIGaG~VG~~~a~~l~~~~l~~el~L~D~~~~~~~g~a~Dl~~~~~~~~~~~~~~~~----~~~~~~adivvitag~   78 (142)
T d1y6ja1           3 KVAIIGAGFVGASAAFTMALRQTANELVLIDVFKEKAIGEAMDINHGLPFMGQMSLYAGD----YSDVKDCDVIVVTAGA   78 (142)
T ss_dssp             CEEEECCSHHHHHHHHHHHHTTCSSEEEEECCC---CCHHHHHHTTSCCCTTCEEEC--C----GGGGTTCSEEEECCCC
T ss_pred             eEEEECCCHHHHHHHHHHHhcCCCCEEEEEeccCCccceeeeeeccCcccCCCeeEeeCc----HHHhCCCceEEEeccc
Confidence            58889999999999988888765  78888877765333333332 1     11111111    1223578999988876


Q ss_pred             c
Q 018067          258 V  258 (361)
Q Consensus       258 ~  258 (361)
                      +
T Consensus        79 ~   79 (142)
T d1y6ja1          79 N   79 (142)
T ss_dssp             -
T ss_pred             c
Confidence            4

>d1q1ra1 c.3.1.5 (A:2-114,A:248-319) Putidaredoxin reductase {Pseudomonas putida [TaxId: 303]}

class: Alpha and beta proteins (a/b)
fold: FAD/NAD(P)-binding domain
superfamily: FAD/NAD(P)-binding domain
family: FAD/NAD-linked reductases, N-terminal and central domains
domain: Putidaredoxin reductase
species: Pseudomonas putida [TaxId: 303]

Probab=89.47  E-value=0.17  Score=38.82  Aligned_cols=31  Identities=23%  Similarity=0.129  Sum_probs=26.5

Q ss_pred             CCCEEEEEcCChHHHHHHHHHHHcCCeEEEE
Q 018067          183 PGMHVGVVGLGGLGHVAVKFAKAMGVKVTVI  213 (361)
Q Consensus       183 ~g~~vlV~Gag~vG~~a~~la~~~g~~vi~~  213 (361)
                      .+++|+|+|+|.+|.-++..++.+|.++.++
T Consensus         2 ~~~~VvIIGgG~~G~e~A~~l~~~g~~v~v~   32 (185)
T d1q1ra1           2 ANDNVVIVGTGLAGVEVAFGLRASGWEGNIR   32 (185)
T ss_dssp             CSCEEEEECCSHHHHHHHHHHHHTTCCSEEE
T ss_pred             CCCCEEEECCcHHHHHHHHHHHHcCCceEEE
Confidence            5689999999999999999999999865444

>d1lvla1 c.3.1.5 (A:1-150,A:266-335) Dihydrolipoamide dehydrogenase {Pseudomonas putida [TaxId: 303]}

class: Alpha and beta proteins (a/b)
fold: FAD/NAD(P)-binding domain
superfamily: FAD/NAD(P)-binding domain
family: FAD/NAD-linked reductases, N-terminal and central domains
domain: Dihydrolipoamide dehydrogenase
species: Pseudomonas putida [TaxId: 303]

Probab=89.46  E-value=0.16  Score=40.45  Aligned_cols=31  Identities=23%  Similarity=0.306  Sum_probs=28.3

Q ss_pred             EEEEEcCChHHHHHHHHHHHcCCeEEEEeCC
Q 018067          186 HVGVVGLGGLGHVAVKFAKAMGVKVTVISTS  216 (361)
Q Consensus       186 ~vlV~Gag~vG~~a~~la~~~g~~vi~~~~~  216 (361)
                      .++|+|+|+.|+.++..|..+|.+|.++...
T Consensus         7 DlvVIG~GpaGl~aA~~aa~~G~~V~liE~~   37 (220)
T d1lvla1           7 TLLIIGGGPGGYVAAIRAGQLGIPTVLVEGQ   37 (220)
T ss_dssp             SEEEECCSHHHHHHHHHHHHHTCCEEEECSS
T ss_pred             CEEEECCCHHHHHHHHHHHHCCCcEEEEecC
Confidence            3889999999999999999999999998764

>d1ebda1 c.3.1.5 (A:7-154,A:272-346) Dihydrolipoamide dehydrogenase {Bacillus stearothermophilus [TaxId: 1422]}

class: Alpha and beta proteins (a/b)
fold: FAD/NAD(P)-binding domain
superfamily: FAD/NAD(P)-binding domain
family: FAD/NAD-linked reductases, N-terminal and central domains
domain: Dihydrolipoamide dehydrogenase
species: Bacillus stearothermophilus [TaxId: 1422]

Probab=89.43  E-value=0.2  Score=39.76  Aligned_cols=30  Identities=40%  Similarity=0.436  Sum_probs=27.7

Q ss_pred             EEEEcCChHHHHHHHHHHHcCCeEEEEeCC
Q 018067          187 VGVVGLGGLGHVAVKFAKAMGVKVTVISTS  216 (361)
Q Consensus       187 vlV~Gag~vG~~a~~la~~~g~~vi~~~~~  216 (361)
                      |+|+|+|+.|+.++..|...|.+|.++...
T Consensus         6 viVIG~GpaGl~aA~~aar~G~kV~vIEk~   35 (223)
T d1ebda1           6 TLVVGAGPGGYVAAIRAAQLGQKVTIVEKG   35 (223)
T ss_dssp             EEEECCSHHHHHHHHHHHHTTCCEEEEESS
T ss_pred             EEEECCCHHHHHHHHHHHHCCCEEEEEecC
Confidence            788999999999999999999999999764

>d2a35a1 c.2.1.2 (A:4-215) Hypothetical protein PA4017 {Pseudomonas aeruginosa [TaxId: 287]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Tyrosine-dependent oxidoreductases
domain: Hypothetical protein PA4017
species: Pseudomonas aeruginosa [TaxId: 287]

Probab=89.42  E-value=0.17  Score=39.98  Aligned_cols=67  Identities=12%  Similarity=0.010  Sum_probs=42.4

Q ss_pred             CEEEEEcC-ChHHHHHHHHHHHcCC--eEEEEeCCchhHHHHHHHcCCCEEecCCCH-HHHHHhcCCccEEEEcCCCc
Q 018067          185 MHVGVVGL-GGLGHVAVKFAKAMGV--KVTVISTSPSKKSEAIERLGADSFLVSRDQ-DEMQAAMGTMDGIIDTVSAV  258 (361)
Q Consensus       185 ~~vlV~Ga-g~vG~~a~~la~~~g~--~vi~~~~~~~~~~~~~~~~g~~~vv~~~~~-~~~~~~~~g~d~vid~~g~~  258 (361)
                      ++|||+|+ |-+|...+..+...|.  +|++..+.....      . ...-.+..+. +....+...+|.||.++|..
T Consensus         3 KkIlItGatG~iG~~lv~~L~~~~~~~~v~~~~r~~~~~------~-~~~~~~~~d~~~~~~~~~~~~d~vi~~~g~~   73 (212)
T d2a35a1           3 KRVLLAGATGLTGEHLLDRILSEPTLAKVIAPARKALAE------H-PRLDNPVGPLAELLPQLDGSIDTAFCCLGTT   73 (212)
T ss_dssp             CEEEEECTTSHHHHHHHHHHHHCTTCCEEECCBSSCCCC------C-TTEECCBSCHHHHGGGCCSCCSEEEECCCCC
T ss_pred             CEEEEECCCcHHHHHHHHHHHhCCCeEEEEEEeCCchhh------c-ccccccccchhhhhhccccchheeeeeeeee
Confidence            68999998 9999999998888886  666655543210      0 1111112222 22233445799999999864

>d2ex4a1 c.66.1.42 (A:2-224) Adrenal gland protein AD-003 (C9orf32) {Human (Homo sapiens) [TaxId: 9606]}

class: Alpha and beta proteins (a/b)
fold: S-adenosyl-L-methionine-dependent methyltransferases
superfamily: S-adenosyl-L-methionine-dependent methyltransferases
family: AD-003 protein-like
domain: Adrenal gland protein AD-003 (C9orf32)
species: Human (Homo sapiens) [TaxId: 9606]

Probab=89.36  E-value=0.25  Score=39.41  Aligned_cols=96  Identities=15%  Similarity=0.133  Sum_probs=61.2

Q ss_pred             CCCCCEEEEEcCChHHHHHHHHHHHcCCeEEEEeCCchhHHHHHHHcC---CC--EEecCCCHHHHHHhcCCccEEEEcC
Q 018067          181 DKPGMHVGVVGLGGLGHVAVKFAKAMGVKVTVISTSPSKKSEAIERLG---AD--SFLVSRDQDEMQAAMGTMDGIIDTV  255 (361)
Q Consensus       181 ~~~g~~vlV~Gag~vG~~a~~la~~~g~~vi~~~~~~~~~~~~~~~~g---~~--~vv~~~~~~~~~~~~~g~d~vid~~  255 (361)
                      ..++.+||=+|+|. |..+..+++..+.+|+.++-+++....+.+.+.   ..  ..+. .+...+....+.+|+|+..-
T Consensus        58 ~~~~~~vLDiGcG~-G~~~~~l~~~~~~~v~~vD~s~~~l~~ak~~~~~~~~~~~~f~~-~d~~~~~~~~~~fD~I~~~~  135 (222)
T d2ex4a1          58 KTGTSCALDCGAGI-GRITKRLLLPLFREVDMVDITEDFLVQAKTYLGEEGKRVRNYFC-CGLQDFTPEPDSYDVIWIQW  135 (222)
T ss_dssp             CCCCSEEEEETCTT-THHHHHTTTTTCSEEEEEESCHHHHHHHHHHTGGGGGGEEEEEE-CCGGGCCCCSSCEEEEEEES
T ss_pred             CCCCCEEEEeccCC-CHhhHHHHHhcCCEEEEeecCHHHhhcccccccccccccccccc-cccccccccccccccccccc
Confidence            46778899999874 777777777777799999988877666544332   11  1121 12111111124689998643


Q ss_pred             CC-----c---ccHHHHHhccccCCEEEEec
Q 018067          256 SA-----V---HPLMPLIGLLKSQGKLVLVG  278 (361)
Q Consensus       256 g~-----~---~~~~~~~~~l~~~G~~v~~g  278 (361)
                      .-     +   ..+..+.+.|+++|.++...
T Consensus       136 ~l~h~~~~~~~~~l~~i~~~Lk~~G~~~i~~  166 (222)
T d2ex4a1         136 VIGHLTDQHLAEFLRRCKGSLRPNGIIVIKD  166 (222)
T ss_dssp             CGGGSCHHHHHHHHHHHHHHEEEEEEEEEEE
T ss_pred             ccccchhhhhhhHHHHHHHhcCCcceEEEEE
Confidence            22     1   24667888999999998764

>d2v5za1 c.3.1.2 (A:6-289,A:402-500) Monoamine oxidase B {Human (Homo sapiens) [TaxId: 9606]}

class: Alpha and beta proteins (a/b)
fold: FAD/NAD(P)-binding domain
superfamily: FAD/NAD(P)-binding domain
family: FAD-linked reductases, N-terminal domain
domain: Monoamine oxidase B
species: Human (Homo sapiens) [TaxId: 9606]

Probab=89.28  E-value=0.18  Score=42.87  Aligned_cols=31  Identities=35%  Similarity=0.416  Sum_probs=28.2

Q ss_pred             EEEEcCChHHHHHHHHHHHcCCeEEEEeCCc
Q 018067          187 VGVVGLGGLGHVAVKFAKAMGVKVTVISTSP  217 (361)
Q Consensus       187 vlV~Gag~vG~~a~~la~~~g~~vi~~~~~~  217 (361)
                      |+|+|+|..|++++..++..|.+|+++...+
T Consensus         2 ViVIGaG~aGL~aA~~L~~~G~~V~VlE~~~   32 (383)
T d2v5za1           2 VVVVGGGISGMAAAKLLHDSGLNVVVLEARD   32 (383)
T ss_dssp             EEEECCBHHHHHHHHHHHHTTCCEEEEESSS
T ss_pred             EEEECCCHHHHHHHHHHHhCCCCEEEEecCC
Confidence            7899999999999999999999999997643

>d1t2da1 c.2.1.5 (A:1-150) Lactate dehydrogenase {Malaria parasite (Plasmodium falciparum) [TaxId: 5833]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: LDH N-terminal domain-like
domain: Lactate dehydrogenase
species: Malaria parasite (Plasmodium falciparum) [TaxId: 5833]

Probab=89.23  E-value=0.49  Score=35.33  Aligned_cols=72  Identities=15%  Similarity=0.158  Sum_probs=46.5

Q ss_pred             CCCEEEEEcCChHHHHHHHHHHHcCC-eEEEEeCCchhHHHHHHHcC-------CCE-EecCCCHHHHHHhcCCccEEEE
Q 018067          183 PGMHVGVVGLGGLGHVAVKFAKAMGV-KVTVISTSPSKKSEAIERLG-------ADS-FLVSRDQDEMQAAMGTMDGIID  253 (361)
Q Consensus       183 ~g~~vlV~Gag~vG~~a~~la~~~g~-~vi~~~~~~~~~~~~~~~~g-------~~~-vv~~~~~~~~~~~~~g~d~vid  253 (361)
                      |..+|.|+|+|.+|...+.++...+. ++.+++..+++....+.++.       ... +....+    .+...+.|+|+-
T Consensus         2 p~~KI~IIGaG~VG~~~a~~l~~~~l~el~L~Di~~~~~~g~a~Dl~~~~~~~~~~~~v~~~~~----~~~~~~advvvi   77 (150)
T d1t2da1           2 PKAKIVLVGSGMIGGVMATLIVQKNLGDVVLFDIVKNMPHGKALDTSHTNVMAYSNCKVSGSNT----YDDLAGADVVIV   77 (150)
T ss_dssp             CCCEEEEECCSHHHHHHHHHHHHTTCCEEEEECSSSSHHHHHHHHHHTHHHHHTCCCCEEEECC----GGGGTTCSEEEE
T ss_pred             CCCeEEEECCCHHHHHHHHHHHhCCCCeEEEEeccCCcceeeecchhhhccccCCCcEEEeccc----ccccCCCcEEEE
Confidence            45689999999999999988888776 88888877765443333321       111 111111    123357899998


Q ss_pred             cCCCc
Q 018067          254 TVSAV  258 (361)
Q Consensus       254 ~~g~~  258 (361)
                      ++|.+
T Consensus        78 tag~~   82 (150)
T d1t2da1          78 TAGFT   82 (150)
T ss_dssp             CCSCS
T ss_pred             ecccc
Confidence            88854

>d1dlja2 c.2.1.6 (A:1-196) UDP-glucose dehydrogenase (UDPGDH) {Streptococcus pyogenes [TaxId: 1314]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: 6-phosphogluconate dehydrogenase-like, N-terminal domain
domain: UDP-glucose dehydrogenase (UDPGDH)
species: Streptococcus pyogenes [TaxId: 1314]

Probab=89.21  E-value=0.31  Score=38.07  Aligned_cols=38  Identities=24%  Similarity=0.318  Sum_probs=32.0

Q ss_pred             EEEEEcCChHHHHHHHHHHHcCCeEEEEeCCchhHHHHH
Q 018067          186 HVGVVGLGGLGHVAVKFAKAMGVKVTVISTSPSKKSEAI  224 (361)
Q Consensus       186 ~vlV~Gag~vG~~a~~la~~~g~~vi~~~~~~~~~~~~~  224 (361)
                      +|.|+|.|-+|+..+..+ +.|.+|+.++.++++...+.
T Consensus         2 kI~ViGlG~vGl~~a~~~-a~g~~V~g~Din~~~v~~l~   39 (196)
T d1dlja2           2 KIAVAGSGYVGLSLGVLL-SLQNEVTIVDILPSKVDKIN   39 (196)
T ss_dssp             EEEEECCSHHHHHHHHHH-TTTSEEEEECSCHHHHHHHH
T ss_pred             EEEEECCChhHHHHHHHH-HCCCcEEEEECCHHHHHHHh
Confidence            588999999999887666 57999999999988877663

>d1jbqa_ c.79.1.1 (A:) Cystathionine beta-synthase {Human (Homo sapiens) [TaxId: 9606]}

class: Alpha and beta proteins (a/b)
fold: Tryptophan synthase beta subunit-like PLP-dependent enzymes
superfamily: Tryptophan synthase beta subunit-like PLP-dependent enzymes
family: Tryptophan synthase beta subunit-like PLP-dependent enzymes
domain: Cystathionine beta-synthase
species: Human (Homo sapiens) [TaxId: 9606]

Probab=89.05  E-value=1.8  Score=36.96  Aligned_cols=103  Identities=17%  Similarity=0.214  Sum_probs=66.0

Q ss_pred             hcCCCCCCCEEEEEcCChHHHHHHHHHHHcCCeEEEEeCC--chhHHHHHHHcCCCEEecCCC--------H--------
Q 018067          177 FYGLDKPGMHVGVVGLGGLGHVAVKFAKAMGVKVTVISTS--PSKKSEAIERLGADSFLVSRD--------Q--------  238 (361)
Q Consensus       177 ~~~~~~~g~~vlV~Gag~vG~~a~~la~~~g~~vi~~~~~--~~~~~~~~~~~g~~~vv~~~~--------~--------  238 (361)
                      +.+.++++..|+...+|..|++++..|+.+|.+.+++...  ++.+...++.+|++.+.....        .        
T Consensus        90 ~~g~~~~~~~vv~aSsGN~g~a~A~~a~~~Gi~~~iv~p~~~~~~k~~~i~~~GA~vv~v~~~~~~~~~~~~~~~~~~~~  169 (355)
T d1jbqa_          90 RDGTLKPGDTIIEPTSGNTGIGLALAAAVRGYRCIIVMPEKMSSEKVDVLRALGAEIVRTPTNARFDSPESHVGVAWRLK  169 (355)
T ss_dssp             HHTCSCTTCEEEEECSSHHHHHHHHHHHHHTCEEEEEECSCCCHHHHHHHHHTTCEEEECCC-------CCHHHHHHHHH
T ss_pred             HcCCcccCceEEEecccchhhHHHHHHHhccCCeEEEeeccchHHHHHHHHhcCCeEEEecccccchhhhhhhhHHHHHH
Confidence            4455567777666777999999999999999976666543  233445568899875432111        0        


Q ss_pred             ---------------------------HHHHHhcCCccEEEEcCCCcccHHHH---HhccccCCEEEEecC
Q 018067          239 ---------------------------DEMQAAMGTMDGIIDTVSAVHPLMPL---IGLLKSQGKLVLVGA  279 (361)
Q Consensus       239 ---------------------------~~~~~~~~g~d~vid~~g~~~~~~~~---~~~l~~~G~~v~~g~  279 (361)
                                                 +...++.+.+|.+|-++|+..++...   ++...+.-+++.+..
T Consensus       170 ~~~~~~~~~~~~~~~~~~~ag~~t~~~EI~~ql~~~~d~vv~~vG~GG~~~Gi~~~lk~~~~~~kii~vep  240 (355)
T d1jbqa_         170 NEIPNSHILDQYRNASNPLAHYDTTADEILQQCDGKLDMLVASVGTGGTITGIARKLKEKCPGCRIIGVDP  240 (355)
T ss_dssp             HHSTTEECCCTTTCTHHHHHHHHTHHHHHHHHHTTCCCEEEEECSSSHHHHHHHHHHHHHCTTCEEEEEEE
T ss_pred             HhccccccccccCcccchhhhcccchhhhhhhcCCCCCeeEecccCCchHHHHHHHHhhcCCcceEEeecc
Confidence                                       01112223689999999986544443   444456777777653

>d1i8ta1 c.4.1.3 (A:1-244,A:314-367) UDP-galactopyranose mutase, N-terminal domain {Escherichia coli [TaxId: 562]}

class: Alpha and beta proteins (a/b)
fold: Nucleotide-binding domain
superfamily: Nucleotide-binding domain
family: UDP-galactopyranose mutase, N-terminal domain
domain: UDP-galactopyranose mutase, N-terminal domain
species: Escherichia coli [TaxId: 562]

Probab=89.02  E-value=0.17  Score=42.69  Aligned_cols=32  Identities=31%  Similarity=0.332  Sum_probs=28.7

Q ss_pred             EEEEEcCChHHHHHHHHHHHcCCeEEEEeCCc
Q 018067          186 HVGVVGLGGLGHVAVKFAKAMGVKVTVISTSP  217 (361)
Q Consensus       186 ~vlV~Gag~vG~~a~~la~~~g~~vi~~~~~~  217 (361)
                      .|+|+|||..|+.++..+...|.+|.++...+
T Consensus         3 dv~IIGaG~sGl~~A~~L~~~g~~V~iiEk~~   34 (298)
T d1i8ta1           3 DYIIVGSGLFGAVCANELKKLNKKVLVIEKRN   34 (298)
T ss_dssp             EEEEECCSHHHHHHHHHHGGGTCCEEEECSSS
T ss_pred             cEEEECCcHHHHHHHHHHHhCCCcEEEEECCC
Confidence            48999999999999999998899999988754

>d1vdca1 c.3.1.5 (A:1-117,A:244-316) Thioredoxin reductase {Mouse-ear cress (Arabidopsis thaliana) [TaxId: 3702]}

class: Alpha and beta proteins (a/b)
fold: FAD/NAD(P)-binding domain
superfamily: FAD/NAD(P)-binding domain
family: FAD/NAD-linked reductases, N-terminal and central domains
domain: Thioredoxin reductase
species: Mouse-ear cress (Arabidopsis thaliana) [TaxId: 3702]

Probab=89.00  E-value=0.19  Score=39.21  Aligned_cols=32  Identities=22%  Similarity=0.283  Sum_probs=28.2

Q ss_pred             CEEEEEcCChHHHHHHHHHHHcCCeEEEEeCC
Q 018067          185 MHVGVVGLGGLGHVAVKFAKAMGVKVTVISTS  216 (361)
Q Consensus       185 ~~vlV~Gag~vG~~a~~la~~~g~~vi~~~~~  216 (361)
                      .+|+|+|+|+.|+.++..|...|.+++++...
T Consensus         6 ~~VvIIGgGpaGl~aA~~~ar~g~~v~vie~~   37 (192)
T d1vdca1           6 TRLCIVGSGPAAHTAAIYAARAELKPLLFEGW   37 (192)
T ss_dssp             EEEEEECCSHHHHHHHHHHHHTTCCCEEECCS
T ss_pred             ceEEEECCCHHHHHHHHHHHHcCCcEEEEEee
Confidence            56999999999999999999999999888643

>d1xtpa_ c.66.1.42 (A:) Hypothetical protein Lmaj004091aaa (LmjF30.0810) {Leishmania major [TaxId: 5664]}

class: Alpha and beta proteins (a/b)
fold: S-adenosyl-L-methionine-dependent methyltransferases
superfamily: S-adenosyl-L-methionine-dependent methyltransferases
family: AD-003 protein-like
domain: Hypothetical protein Lmaj004091aaa (LmjF30.0810)
species: Leishmania major [TaxId: 5664]

Probab=88.89  E-value=0.47  Score=38.77  Aligned_cols=97  Identities=12%  Similarity=0.058  Sum_probs=62.8

Q ss_pred             CCCCCEEEEEcCChHHHHHHHHHHHcCCeEEEEeCCchhHHHHHHHcCCCEEecC--CCHHHHHHhcCCccEEEEcCCCc
Q 018067          181 DKPGMHVGVVGLGGLGHVAVKFAKAMGVKVTVISTSPSKKSEAIERLGADSFLVS--RDQDEMQAAMGTMDGIIDTVSAV  258 (361)
Q Consensus       181 ~~~g~~vlV~Gag~vG~~a~~la~~~g~~vi~~~~~~~~~~~~~~~~g~~~vv~~--~~~~~~~~~~~g~d~vid~~g~~  258 (361)
                      ..++.+||=+|+|. |..+.++|.....+|..++.+++-.+.+.+.+.....+..  .+.+...-..+.+|+|+-.-.-.
T Consensus        91 ~~~~~~vLD~GcG~-G~~t~~ll~~~~~~v~~vD~s~~~l~~a~~~~~~~~~~~~~~~d~~~~~~~~~~fD~I~~~~vl~  169 (254)
T d1xtpa_          91 GHGTSRALDCGAGI-GRITKNLLTKLYATTDLLEPVKHMLEEAKRELAGMPVGKFILASMETATLPPNTYDLIVIQWTAI  169 (254)
T ss_dssp             TCCCSEEEEETCTT-THHHHHTHHHHCSEEEEEESCHHHHHHHHHHTTTSSEEEEEESCGGGCCCCSSCEEEEEEESCGG
T ss_pred             CCCCCeEEEecccC-ChhhHHHHhhcCceEEEEcCCHHHHHhhhccccccccceeEEccccccccCCCccceEEeecccc
Confidence            36777888899875 8888888877677899999998877666555543222221  12111111124699987654322


Q ss_pred             --------ccHHHHHhccccCCEEEEec
Q 018067          259 --------HPLMPLIGLLKSQGKLVLVG  278 (361)
Q Consensus       259 --------~~~~~~~~~l~~~G~~v~~g  278 (361)
                              ..+..+.+.|+++|.++..-
T Consensus       170 hl~d~d~~~~l~~~~~~LkpgG~iii~e  197 (254)
T d1xtpa_         170 YLTDADFVKFFKHCQQALTPNGYIFFKE  197 (254)
T ss_dssp             GSCHHHHHHHHHHHHHHEEEEEEEEEEE
T ss_pred             ccchhhhHHHHHHHHHhcCCCcEEEEEe
Confidence                    23667888999999998753

>d2p7ia1 c.66.1.41 (A:22-246) Hypothetical protein ECA1738 {Erwinia carotovora [TaxId: 554]}

class: Alpha and beta proteins (a/b)
fold: S-adenosyl-L-methionine-dependent methyltransferases
superfamily: S-adenosyl-L-methionine-dependent methyltransferases
family: UbiE/COQ5-like
domain: Hypothetical protein ECA1738
species: Erwinia carotovora [TaxId: 554]

Probab=88.69  E-value=0.38  Score=38.45  Aligned_cols=99  Identities=18%  Similarity=0.111  Sum_probs=57.3

Q ss_pred             hhcCCCCCCCEEEEEcCChHHHHHHHHHHHcCCeEEEEeCCchhHHHHHHHcCCCEEecCCCHHHHHHhcCCccEEEEcC
Q 018067          176 RFYGLDKPGMHVGVVGLGGLGHVAVKFAKAMGVKVTVISTSPSKKSEAIERLGADSFLVSRDQDEMQAAMGTMDGIIDTV  255 (361)
Q Consensus       176 ~~~~~~~~g~~vlV~Gag~vG~~a~~la~~~g~~vi~~~~~~~~~~~~~~~~g~~~vv~~~~~~~~~~~~~g~d~vid~~  255 (361)
                      +...+..++.+||=+|+|. |..+..+++ .|.+|+.++-+++....+.+.+.-..-+...+.+.. ...+.+|+|+-.-
T Consensus        13 ~~~~~~~~~~~VLDiGcG~-G~~~~~l~~-~g~~v~giD~s~~~i~~a~~~~~~~~~~~~~~~~~~-~~~~~fD~I~~~~   89 (225)
T d2p7ia1          13 RAFTPFFRPGNLLELGSFK-GDFTSRLQE-HFNDITCVEASEEAISHAQGRLKDGITYIHSRFEDA-QLPRRYDNIVLTH   89 (225)
T ss_dssp             HHHGGGCCSSCEEEESCTT-SHHHHHHTT-TCSCEEEEESCHHHHHHHHHHSCSCEEEEESCGGGC-CCSSCEEEEEEES
T ss_pred             HHhhhhCCCCcEEEEeCCC-cHHHHHHHH-cCCeEEEEeCcHHHhhhhhccccccccccccccccc-ccccccccccccc
Confidence            3333334566788899865 666666654 578999999988776666444442211222222211 1234799987432


Q ss_pred             C-----Cc-ccHHHHH-hccccCCEEEEe
Q 018067          256 S-----AV-HPLMPLI-GLLKSQGKLVLV  277 (361)
Q Consensus       256 g-----~~-~~~~~~~-~~l~~~G~~v~~  277 (361)
                      -     .+ ..+.... ++|+++|.++..
T Consensus        90 vleh~~d~~~~l~~i~~~~Lk~gG~l~i~  118 (225)
T d2p7ia1          90 VLEHIDDPVALLKRINDDWLAEGGRLFLV  118 (225)
T ss_dssp             CGGGCSSHHHHHHHHHHTTEEEEEEEEEE
T ss_pred             eeEecCCHHHHHHHHHHHhcCCCceEEEE
Confidence            1     11 1233444 578999988864

>d1uira_ c.66.1.17 (A:) Spermidine synthase {Thermus thermophilus [TaxId: 274]}

class: Alpha and beta proteins (a/b)
fold: S-adenosyl-L-methionine-dependent methyltransferases
superfamily: S-adenosyl-L-methionine-dependent methyltransferases
family: Spermidine synthase
domain: Spermidine synthase
species: Thermus thermophilus [TaxId: 274]

Probab=88.66  E-value=0.48  Score=40.12  Aligned_cols=94  Identities=19%  Similarity=0.192  Sum_probs=56.9

Q ss_pred             CCCCEEEEEcCChHHHHHHHHHHHcCC-eEEEEeCCchhHHHHHHHc------CC----C-EEecCCCHHHHHHhcCCcc
Q 018067          182 KPGMHVGVVGLGGLGHVAVKFAKAMGV-KVTVISTSPSKKSEAIERL------GA----D-SFLVSRDQDEMQAAMGTMD  249 (361)
Q Consensus       182 ~~g~~vlV~Gag~vG~~a~~la~~~g~-~vi~~~~~~~~~~~~~~~~------g~----~-~vv~~~~~~~~~~~~~g~d  249 (361)
                      ...++|||+|+|. |..+-++++.... +|.++.-+++ .-++++++      ++    . .++..+..+.++.....+|
T Consensus        76 ~~pk~VLiiG~G~-G~~~~~ll~~~~~~~v~~VEiD~~-Vi~~a~~~f~~~~~~~~~d~rv~i~~~Da~~~l~~~~~~yD  153 (312)
T d1uira_          76 PEPKRVLIVGGGE-GATLREVLKHPTVEKAVMVDIDGE-LVEVAKRHMPEWHQGAFDDPRAVLVIDDARAYLERTEERYD  153 (312)
T ss_dssp             SCCCEEEEEECTT-SHHHHHHTTSTTCCEEEEEESCHH-HHHHHHHHCHHHHTTGGGCTTEEEEESCHHHHHHHCCCCEE
T ss_pred             CCcceEEEeCCCc-hHHHHHHHhcCCcceEEEecCCHH-HHHHHHhcCcccccCccCCCceEEEEchHHHHhhhcCCccc
Confidence            4568899998764 5566677777654 7777766554 33443432      11    1 2332333455555556899


Q ss_pred             EEE-Ec---CCCc---------ccHHHHHhccccCCEEEEe
Q 018067          250 GII-DT---VSAV---------HPLMPLIGLLKSQGKLVLV  277 (361)
Q Consensus       250 ~vi-d~---~g~~---------~~~~~~~~~l~~~G~~v~~  277 (361)
                      +|| |.   .+..         ..+..+.+.|+++|.++.-
T Consensus       154 vIi~D~~dp~~~~~~~~~L~t~eF~~~~~~~L~p~Gvlv~~  194 (312)
T d1uira_         154 VVIIDLTDPVGEDNPARLLYTVEFYRLVKAHLNPGGVMGMQ  194 (312)
T ss_dssp             EEEEECCCCBSTTCGGGGGSSHHHHHHHHHTEEEEEEEEEE
T ss_pred             EEEEeCCCcccccchhhhhhhHHHHHHHHHhcCCCceEEEe
Confidence            985 43   2211         1356788999999988763

>d1pn0a1 c.3.1.2 (A:1-240,A:342-461) Phenol hydroxylase {Soil-living yeast (Trichosporon cutaneum) [TaxId: 5554]}

class: Alpha and beta proteins (a/b)
fold: FAD/NAD(P)-binding domain
superfamily: FAD/NAD(P)-binding domain
family: FAD-linked reductases, N-terminal domain
domain: Phenol hydroxylase
species: Soil-living yeast (Trichosporon cutaneum) [TaxId: 5554]

Probab=88.58  E-value=0.17  Score=43.13  Aligned_cols=32  Identities=28%  Similarity=0.407  Sum_probs=26.8

Q ss_pred             EEEEEcCChHHHHHHHHHH-----HcCCeEEEEeCCc
Q 018067          186 HVGVVGLGGLGHVAVKFAK-----AMGVKVTVISTSP  217 (361)
Q Consensus       186 ~vlV~Gag~vG~~a~~la~-----~~g~~vi~~~~~~  217 (361)
                      .|+|+|+|++|++++.++.     ..|.+|+++.+.+
T Consensus         9 DV~IvGaG~aGl~lA~~La~~~~~~~G~~v~vlEr~~   45 (360)
T d1pn0a1           9 DVLIVGAGPAGLMAARVLSEYVRQKPDLKVRIIDKRS   45 (360)
T ss_dssp             EEEEECCSHHHHHHHHHHHHHHHHSTTCCEEEECSSS
T ss_pred             CEEEECcCHHHHHHHHHHHhcccccCCCcEEEEcCCC
Confidence            3899999999999988874     4699999998754

>d2gf3a1 c.3.1.2 (A:1-217,A:322-385) Sarcosine oxidase {Bacillus sp., strain b0618 [TaxId: 1409]}

class: Alpha and beta proteins (a/b)
fold: FAD/NAD(P)-binding domain
superfamily: FAD/NAD(P)-binding domain
family: FAD-linked reductases, N-terminal domain
domain: Sarcosine oxidase
species: Bacillus sp., strain b0618 [TaxId: 1409]

Probab=88.41  E-value=0.23  Score=41.04  Aligned_cols=31  Identities=32%  Similarity=0.347  Sum_probs=28.3

Q ss_pred             EEEEcCChHHHHHHHHHHHcCCeEEEEeCCc
Q 018067          187 VGVVGLGGLGHVAVKFAKAMGVKVTVISTSP  217 (361)
Q Consensus       187 vlV~Gag~vG~~a~~la~~~g~~vi~~~~~~  217 (361)
                      |+|+|+|.+|++++.-+...|.+|+++.+.+
T Consensus         6 vvIIGaGi~Gls~A~~La~~G~~V~viE~~~   36 (281)
T d2gf3a1           6 VIVVGAGSMGMAAGYQLAKQGVKTLLVDAFD   36 (281)
T ss_dssp             EEEECCSHHHHHHHHHHHHTTCCEEEECSSC
T ss_pred             EEEECcCHHHHHHHHHHHHCCCcEEEEeCCC
Confidence            8999999999999999999999999998753

>d1inla_ c.66.1.17 (A:) Spermidine synthase {Thermotoga maritima [TaxId: 2336]}

class: Alpha and beta proteins (a/b)
fold: S-adenosyl-L-methionine-dependent methyltransferases
superfamily: S-adenosyl-L-methionine-dependent methyltransferases
family: Spermidine synthase
domain: Spermidine synthase
species: Thermotoga maritima [TaxId: 2336]

Probab=88.35  E-value=0.25  Score=41.53  Aligned_cols=96  Identities=17%  Similarity=0.145  Sum_probs=56.0

Q ss_pred             CCCCEEEEEcCChHHHHHHHHHHHcCC-eEEEEeCCchhHHHHHHHcCC---------C-EEecCCCHHHHHHhcCCccE
Q 018067          182 KPGMHVGVVGLGGLGHVAVKFAKAMGV-KVTVISTSPSKKSEAIERLGA---------D-SFLVSRDQDEMQAAMGTMDG  250 (361)
Q Consensus       182 ~~g~~vlV~Gag~vG~~a~~la~~~g~-~vi~~~~~~~~~~~~~~~~g~---------~-~vv~~~~~~~~~~~~~g~d~  250 (361)
                      ...++|||+|+|. |..+-.+++..+. +|.++.-++ ..-++++++-.         . .++..+..+.++...+.+|+
T Consensus        88 ~~pk~VLiiGgG~-G~~~r~~l~~~~~~~i~~VEIDp-~Vi~~a~~~~~~~~~~~~d~rv~v~~~Da~~~l~~~~~~yDv  165 (295)
T d1inla_          88 PNPKKVLIIGGGD-GGTLREVLKHDSVEKAILCEVDG-LVIEAARKYLKQTSCGFDDPRAEIVIANGAEYVRKFKNEFDV  165 (295)
T ss_dssp             SSCCEEEEEECTT-CHHHHHHTTSTTCSEEEEEESCH-HHHHHHHHHCHHHHGGGGCTTEEEEESCHHHHGGGCSSCEEE
T ss_pred             CCCceEEEecCCc-hHHHHHHHhcCCCceEEEecCCH-HHHHHHHHHHHhhcccccCCCcEEEhhhHHHHHhcCCCCCCE
Confidence            4568899998754 4456677777665 666666554 44455554321         1 22222223444444457999


Q ss_pred             EE-EcCC----------CcccHHHHHhccccCCEEEEecC
Q 018067          251 II-DTVS----------AVHPLMPLIGLLKSQGKLVLVGA  279 (361)
Q Consensus       251 vi-d~~g----------~~~~~~~~~~~l~~~G~~v~~g~  279 (361)
                      || |+..          +...+..+.+.|+++|.++.-..
T Consensus       166 Ii~D~~dp~~~~~~~L~t~efy~~~~~~L~~~Gi~v~q~~  205 (295)
T d1inla_         166 IIIDSTDPTAGQGGHLFTEEFYQACYDALKEDGVFSAETE  205 (295)
T ss_dssp             EEEEC----------CCSHHHHHHHHHHEEEEEEEEEECC
T ss_pred             EEEcCCCCCcCchhhhccHHHHHHHHhhcCCCcEEEEecC
Confidence            85 3321          12236678899999999987643

>d3lada1 c.3.1.5 (A:1-158,A:278-348) Dihydrolipoamide dehydrogenase {Azotobacter vinelandii [TaxId: 354]}

class: Alpha and beta proteins (a/b)
fold: FAD/NAD(P)-binding domain
superfamily: FAD/NAD(P)-binding domain
family: FAD/NAD-linked reductases, N-terminal and central domains
domain: Dihydrolipoamide dehydrogenase
species: Azotobacter vinelandii [TaxId: 354]

Probab=88.35  E-value=0.23  Score=39.35  Aligned_cols=30  Identities=33%  Similarity=0.401  Sum_probs=27.6

Q ss_pred             EEEEcCChHHHHHHHHHHHcCCeEEEEeCC
Q 018067          187 VGVVGLGGLGHVAVKFAKAMGVKVTVISTS  216 (361)
Q Consensus       187 vlV~Gag~vG~~a~~la~~~g~~vi~~~~~  216 (361)
                      |+|+|+|+.|+.++..|...|.+|.++...
T Consensus         6 viIIGgGpAGl~aA~~aar~G~~V~viE~~   35 (229)
T d3lada1           6 VIVIGAGPGGYVAAIKSAQLGLKTALIEKY   35 (229)
T ss_dssp             EEEECCSHHHHHHHHHHHHHTCCEEEEECC
T ss_pred             EEEECcCHHHHHHHHHHHHCCCeEEEEecc
Confidence            788999999999999999999999999753

>d3grsa1 c.3.1.5 (A:18-165,A:291-363) Glutathione reductase {Human (Homo sapiens) [TaxId: 9606]}

class: Alpha and beta proteins (a/b)
fold: FAD/NAD(P)-binding domain
superfamily: FAD/NAD(P)-binding domain
family: FAD/NAD-linked reductases, N-terminal and central domains
domain: Glutathione reductase
species: Human (Homo sapiens) [TaxId: 9606]

Probab=88.28  E-value=0.26  Score=39.02  Aligned_cols=30  Identities=23%  Similarity=0.381  Sum_probs=27.6

Q ss_pred             EEEEcCChHHHHHHHHHHHcCCeEEEEeCC
Q 018067          187 VGVVGLGGLGHVAVKFAKAMGVKVTVISTS  216 (361)
Q Consensus       187 vlV~Gag~vG~~a~~la~~~g~~vi~~~~~  216 (361)
                      ++|+|+|+.|+.++..|...|.+|.++...
T Consensus         6 viIIG~GpaG~~aA~~aar~G~kV~vIEk~   35 (221)
T d3grsa1           6 YLVIGGGSGGLASARRAAELGARAAVVESH   35 (221)
T ss_dssp             EEEECCSHHHHHHHHHHHHTTCCEEEEESS
T ss_pred             EEEECCCHHHHHHHHHHHHCCCEEEEEecc
Confidence            788999999999999999999999999764

>d1y0pa2 c.3.1.4 (A:111-361,A:512-568) Flavocytochrome c3 (respiratory fumarate reductase) {Shewanella frigidimarina [TaxId: 56812]}

class: Alpha and beta proteins (a/b)
fold: FAD/NAD(P)-binding domain
superfamily: FAD/NAD(P)-binding domain
family: Succinate dehydrogenase/fumarate reductase flavoprotein N-terminal domain
domain: Flavocytochrome c3 (respiratory fumarate reductase)
species: Shewanella frigidimarina [TaxId: 56812]

Probab=88.28  E-value=0.23  Score=41.72  Aligned_cols=32  Identities=44%  Similarity=0.566  Sum_probs=28.7

Q ss_pred             EEEEEcCChHHHHHHHHHHHcCCeEEEEeCCc
Q 018067          186 HVGVVGLGGLGHVAVKFAKAMGVKVTVISTSP  217 (361)
Q Consensus       186 ~vlV~Gag~vG~~a~~la~~~g~~vi~~~~~~  217 (361)
                      .|+|+|+|..|+.++.-|...|++|+++...+
T Consensus        18 DVlVIG~G~aGl~aA~~la~~G~~V~lvEK~~   49 (308)
T d1y0pa2          18 DVVVVGSGGAGFSAAISATDSGAKVILIEKEP   49 (308)
T ss_dssp             SEEEECCSHHHHHHHHHHHHTTCCEEEECSSS
T ss_pred             CEEEECcCHHHHHHHHHHHHCCCcEEEEecCC
Confidence            38999999999999999999999999988653

>d2nvwa1 c.2.1.3 (A:2-154,A:374-457) Galactose/lactose metabolism regulatory protein GAL80 {Yeast (Kluyveromyces lactis) [TaxId: 28985]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Glyceraldehyde-3-phosphate dehydrogenase-like, N-terminal domain
domain: Galactose/lactose metabolism regulatory protein GAL80
species: Yeast (Kluyveromyces lactis) [TaxId: 28985]

Probab=88.21  E-value=2.9  Score=33.25  Aligned_cols=130  Identities=12%  Similarity=0.074  Sum_probs=73.0

Q ss_pred             CEEEEEcCCh----HHHHHHHHHHHc--CCeEEEEe-CCchhHHHHHHHcCCCEEecCCCHHHHHHhcCCccEEEEcCCC
Q 018067          185 MHVGVVGLGG----LGHVAVKFAKAM--GVKVTVIS-TSPSKKSEAIERLGADSFLVSRDQDEMQAAMGTMDGIIDTVSA  257 (361)
Q Consensus       185 ~~vlV~Gag~----vG~~a~~la~~~--g~~vi~~~-~~~~~~~~~~~~~g~~~vv~~~~~~~~~~~~~g~d~vid~~g~  257 (361)
                      =+|.|+|.|.    ++...+..++..  +++++.+. ++.++..+++++++....-.+.+.+.+.. ...+|+|+.++..
T Consensus        17 irvgiIG~G~~~~~~~~~h~~ai~~~~~~~~ivav~d~~~~~~~~~~~~~~~~~~~~~~~~~~l~~-~~~iD~V~i~tp~   95 (237)
T d2nvwa1          17 IRVGFVGLTSGKSWVAKTHFLAIQQLSSQFQIVALYNPTLKSSLQTIEQLQLKHATGFDSLESFAQ-YKDIDMIVVSVKV   95 (237)
T ss_dssp             EEEEEECCCSTTSHHHHTHHHHHHHTTTTEEEEEEECSCHHHHHHHHHHTTCTTCEEESCHHHHHH-CTTCSEEEECSCH
T ss_pred             eEEEEEecCccccHHHHHHHHHHHhcCCCeEEEEEEcCCHHHHHHHHHhcccccceeecchhhccc-ccccceeeccCCC
Confidence            4688999765    455555555543  56888655 44556677778888643333444333211 2479999999887


Q ss_pred             cccHHHHHhccccC-----CEEEEecCCCCCcccChH------HHH-hC-CcEE-EecccCCHHHHHHHHHHHHc
Q 018067          258 VHPLMPLIGLLKSQ-----GKLVLVGAPEKPLELPAF------SLL-MG-RKIV-GGSMIGGMKETQEMIDFAAK  318 (361)
Q Consensus       258 ~~~~~~~~~~l~~~-----G~~v~~g~~~~~~~~~~~------~~~-~~-~~~i-~g~~~~~~~~~~~~~~ll~~  318 (361)
                      ..-.+....++..|     +.-|++.-   ++..+..      ... .+ ++.+ .+........+..+.+++++
T Consensus        96 ~~h~~~~~~al~aG~~~~~~k~V~~EK---Pla~~~~e~~~l~~~a~~~~~~~~~v~~~~R~~p~~~~~k~~i~~  167 (237)
T d2nvwa1          96 PEHYEVVKNILEHSSQNLNLRYLYVEW---ALAASVQQAEELYSISQQRANLQTIICLQGRYNSVVGNILRIYES  167 (237)
T ss_dssp             HHHHHHHHHHHHHSSSCSSCCEEEEES---SSSSSHHHHHHHHHHHHTCTTCEEEEECGGGCCHHHHHHHHHHHH
T ss_pred             cchhhHHHHHHHhcccccCCceEEEec---cccCCHHHHHHHHHHHhhcCCeeEEEEECCcCCHHHHHHHHHHHh
Confidence            55456666666644     46677744   3333322      222 23 3443 45544444445555555543

>d1a9xa4 c.30.1.1 (A:556-676) Carbamoyl phosphate synthetase (CPS), large subunit PreATP-grasp domains {Escherichia coli [TaxId: 562]}

class: Alpha and beta proteins (a/b)
fold: PreATP-grasp domain
superfamily: PreATP-grasp domain
family: BC N-terminal domain-like
domain: Carbamoyl phosphate synthetase (CPS), large subunit PreATP-grasp domains
species: Escherichia coli [TaxId: 562]

Probab=88.19  E-value=0.43  Score=34.06  Aligned_cols=84  Identities=17%  Similarity=0.210  Sum_probs=52.0

Q ss_pred             CCCEEEEEcCCh--HH---------HHHHHHHHHcCCeEEEEeCCchhHHHHHHHcC-CCEE-ecCCCHHHHHHhc--CC
Q 018067          183 PGMHVGVVGLGG--LG---------HVAVKFAKAMGVKVTVISTSPSKKSEAIERLG-ADSF-LVSRDQDEMQAAM--GT  247 (361)
Q Consensus       183 ~g~~vlV~Gag~--vG---------~~a~~la~~~g~~vi~~~~~~~~~~~~~~~~g-~~~v-v~~~~~~~~~~~~--~g  247 (361)
                      ..++|||+|+|+  +|         .-++..+|..|.+++++..+++...   .++. ++.+ +.+-..+.+..+-  +.
T Consensus         3 ~~kkvlViGsGp~rIGq~~EfDy~~~~a~~aLk~~g~~~IliN~NPeTVs---td~d~aD~lYfeplt~e~v~~Ii~~E~   79 (121)
T d1a9xa4           3 DREKIMVLGGGPNRIGQGIEFDYCCVHASLALREDGYETIMVNCNPETVS---TDYDTSDRLYFEPVTLEDVLEIVRIEK   79 (121)
T ss_dssp             SSCEEEEECCCSCBTTBCHHHHHHHHHHHHHHHHTTCEEEEECCCTTSST---TSTTSSSEEECCCCSHHHHHHHHHHHC
T ss_pred             CCCEEEEECCCcCcccccchhhHHHHHHHHHHHhcCCeEEEEecChhhhh---cChhhcCceEEccCCHHHHHHHHHHhC
Confidence            346899999874  33         3455555667999999999887542   1122 3333 3333445555543  47


Q ss_pred             ccEEEEcCCCcccHHHHHhccc
Q 018067          248 MDGIIDTVSAVHPLMPLIGLLK  269 (361)
Q Consensus       248 ~d~vid~~g~~~~~~~~~~~l~  269 (361)
                      +|.|+-..|+...++.+..+-+
T Consensus        80 p~~ii~~~GGQtalnla~~L~~  101 (121)
T d1a9xa4          80 PKGVIVQYGGQTPLKLARALEA  101 (121)
T ss_dssp             CSEEECSSSTHHHHTTHHHHHH
T ss_pred             CCEEEeehhhhhHHHHHHHHHH
Confidence            8888888888775555554433

>d1mjfa_ c.66.1.17 (A:) Putative spermidine synthetase PF0127 (SpeE) {Archaeon Pyrococcus furiosus [TaxId: 2261]}

class: Alpha and beta proteins (a/b)
fold: S-adenosyl-L-methionine-dependent methyltransferases
superfamily: S-adenosyl-L-methionine-dependent methyltransferases
family: Spermidine synthase
domain: Putative spermidine synthetase PF0127 (SpeE)
species: Archaeon Pyrococcus furiosus [TaxId: 2261]

Probab=87.96  E-value=1  Score=37.28  Aligned_cols=94  Identities=16%  Similarity=0.108  Sum_probs=54.0

Q ss_pred             CCCCEEEEEcCChHHHHHHHHHHHcCCeEEEEeCCchhHHHHHHHcC-CC---------------EEecCCCHHHHHHhc
Q 018067          182 KPGMHVGVVGLGGLGHVAVKFAKAMGVKVTVISTSPSKKSEAIERLG-AD---------------SFLVSRDQDEMQAAM  245 (361)
Q Consensus       182 ~~g~~vlV~Gag~vG~~a~~la~~~g~~vi~~~~~~~~~~~~~~~~g-~~---------------~vv~~~~~~~~~~~~  245 (361)
                      .+.++|||+|+|. |..+-.+++.-..+|.++.- +.+.-++++++- ..               .++..+..+.++. .
T Consensus        71 ~~p~~vLiiG~G~-G~~~~~~l~~~~~~v~~VEi-D~~Vi~~a~~~f~~~~~~~~~~~~~~d~rv~i~~~Da~~~l~~-~  147 (276)
T d1mjfa_          71 PKPKRVLVIGGGD-GGTVREVLQHDVDEVIMVEI-DEDVIMVSKDLIKIDNGLLEAMLNGKHEKAKLTIGDGFEFIKN-N  147 (276)
T ss_dssp             SCCCEEEEEECTT-SHHHHHHTTSCCSEEEEEES-CHHHHHHHHHHTCTTTTHHHHHHTTCCSSEEEEESCHHHHHHH-C
T ss_pred             CCCceEEEecCCc-hHHHHHHHHhCCceEEEecC-CHHHHHHHHHhhhhccchhhhhhccCCCCceEEEChHHHHHhc-c
Confidence            5668899998754 33445555544447766555 445555555432 11               2222222344443 4


Q ss_pred             CCccEEE-EcCCC---------cccHHHHHhccccCCEEEEec
Q 018067          246 GTMDGII-DTVSA---------VHPLMPLIGLLKSQGKLVLVG  278 (361)
Q Consensus       246 ~g~d~vi-d~~g~---------~~~~~~~~~~l~~~G~~v~~g  278 (361)
                      +.+|+|| |....         ...+..+.+.|+++|.++.-+
T Consensus       148 ~~yDvIi~D~~~~~~~~~~L~t~eF~~~~~~~L~~~Gv~v~q~  190 (276)
T d1mjfa_         148 RGFDVIIADSTDPVGPAKVLFSEEFYRYVYDALNNPGIYVTQA  190 (276)
T ss_dssp             CCEEEEEEECCCCC-----TTSHHHHHHHHHHEEEEEEEEEEE
T ss_pred             CCCCEEEEeCCCCCCCcccccCHHHHHhhHhhcCCCceEEEec
Confidence            5799985 44332         123667889999999988653

>d2gh1a1 c.66.1.49 (A:13-293) Methyltransferase BC2162 {Bacillus cereus [TaxId: 1396]}

class: Alpha and beta proteins (a/b)
fold: S-adenosyl-L-methionine-dependent methyltransferases
superfamily: S-adenosyl-L-methionine-dependent methyltransferases
family: BC2162-like
domain: Methyltransferase BC2162
species: Bacillus cereus [TaxId: 1396]

Probab=87.93  E-value=0.64  Score=38.53  Aligned_cols=99  Identities=23%  Similarity=0.175  Sum_probs=63.7

Q ss_pred             cCCCCCCCEEEEEcCChHHHHHHHHHHHc--CCeEEEEeCCchhHHHHHHH---cCCCEEecCCCHHHHHHhcCCccEEE
Q 018067          178 YGLDKPGMHVGVVGLGGLGHVAVKFAKAM--GVKVTVISTSPSKKSEAIER---LGADSFLVSRDQDEMQAAMGTMDGII  252 (361)
Q Consensus       178 ~~~~~~g~~vlV~Gag~vG~~a~~la~~~--g~~vi~~~~~~~~~~~~~~~---~g~~~vv~~~~~~~~~~~~~g~d~vi  252 (361)
                      ..++.++.+||=+|+|. |..+..+++..  +.+|+.++.+++....+.+.   .+.+.-+...+...+ ...+.+|+|+
T Consensus        22 ~~~~~~~~~ILDiGcG~-G~~~~~la~~~~~~~~v~giD~s~~~l~~a~~~~~~~~~~~~f~~~d~~~~-~~~~~fD~v~   99 (281)
T d2gh1a1          22 VWKITKPVHIVDYGCGY-GYLGLVLMPLLPEGSKYTGIDSGETLLAEARELFRLLPYDSEFLEGDATEI-ELNDKYDIAI   99 (281)
T ss_dssp             TSCCCSCCEEEEETCTT-THHHHHHTTTSCTTCEEEEEECCHHHHHHHHHHHHSSSSEEEEEESCTTTC-CCSSCEEEEE
T ss_pred             HhccCCcCEEEEecCcC-CHHHHHHHHhCCCCCEEEEEecchhHhhhhhcccccccccccccccccccc-cccCCceEEE
Confidence            33467788899899874 88888888875  56899999887765544332   333322222221111 1234799998


Q ss_pred             EcCCC------cccHHHHHhccccCCEEEEec
Q 018067          253 DTVSA------VHPLMPLIGLLKSQGKLVLVG  278 (361)
Q Consensus       253 d~~g~------~~~~~~~~~~l~~~G~~v~~g  278 (361)
                      -.-.-      ...+..+.+.|+|||.++..-
T Consensus       100 ~~~~l~~~~d~~~~l~~~~~~LkpgG~lii~~  131 (281)
T d2gh1a1         100 CHAFLLHMTTPETMLQKMIHSVKKGGKIICFE  131 (281)
T ss_dssp             EESCGGGCSSHHHHHHHHHHTEEEEEEEEEEE
T ss_pred             EehhhhcCCCHHHHHHHHHHHcCcCcEEEEEE
Confidence            65332      124678999999999998764

>d1f06a1 c.2.1.3 (A:1-118,A:269-320) Diaminopimelic acid dehydrogenase (DAPDH) {Corynebacterium glutamicum [TaxId: 1718]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Glyceraldehyde-3-phosphate dehydrogenase-like, N-terminal domain
domain: Diaminopimelic acid dehydrogenase (DAPDH)
species: Corynebacterium glutamicum [TaxId: 1718]

Probab=87.83  E-value=0.19  Score=38.46  Aligned_cols=83  Identities=13%  Similarity=0.115  Sum_probs=55.8

Q ss_pred             EEEEEcCChHHHHHHHHHHHc-CCeEEEEeCCchhHHHHHHHcCCCEEecCCCHHHHHHhcCCccEEEEcCCCcccHHHH
Q 018067          186 HVGVVGLGGLGHVAVKFAKAM-GVKVTVISTSPSKKSEAIERLGADSFLVSRDQDEMQAAMGTMDGIIDTVSAVHPLMPL  264 (361)
Q Consensus       186 ~vlV~Gag~vG~~a~~la~~~-g~~vi~~~~~~~~~~~~~~~~g~~~vv~~~~~~~~~~~~~g~d~vid~~g~~~~~~~~  264 (361)
                      +|.|+|.|.+|...+..++.. +++++.+.+..++.      .....+..+.+   ...+...+|+|+.+++...-.+.+
T Consensus         5 rvgiiG~G~ig~~~~~~l~~~~~~elvav~~~~~~~------~~~~~~~~~~~---~~~~~~~~D~Vvi~tp~~~h~~~a   75 (170)
T d1f06a1           5 RVAIVGYGNLGRSVEKLIAKQPDMDLVGIFSRRATL------DTKTPVFDVAD---VDKHADDVDVLFLCMGSATDIPEQ   75 (170)
T ss_dssp             EEEEECCSHHHHHHHHHHTTCSSEEEEEEEESSSCC------SSSSCEEEGGG---GGGTTTTCSEEEECSCTTTHHHHH
T ss_pred             eEEEECChHHHHHHHHHHHhCCCcEEEEEEeccccc------ccccccccchh---hhhhccccceEEEeCCCcccHHHH
Confidence            589999999999888888775 56777666554332      11111222222   122335799999999876547888


Q ss_pred             HhccccCCEEEEe
Q 018067          265 IGLLKSQGKLVLV  277 (361)
Q Consensus       265 ~~~l~~~G~~v~~  277 (361)
                      .++|+.|-.++..
T Consensus        76 ~~aL~aG~~vv~~   88 (170)
T d1f06a1          76 APKFAQFACTVDT   88 (170)
T ss_dssp             HHHHTTTSEEECC
T ss_pred             HHHHHCCCcEEEe
Confidence            8899988887754

>d1feca2 c.3.1.5 (A:170-286) Trypanothione reductase {Crithidia fasciculata [TaxId: 5656]}

class: Alpha and beta proteins (a/b)
fold: FAD/NAD(P)-binding domain
superfamily: FAD/NAD(P)-binding domain
family: FAD/NAD-linked reductases, N-terminal and central domains
domain: Trypanothione reductase
species: Crithidia fasciculata [TaxId: 5656]

Probab=87.73  E-value=0.46  Score=33.62  Aligned_cols=36  Identities=17%  Similarity=0.070  Sum_probs=29.1

Q ss_pred             CCCCEEEEEcCChHHHHHHHHHHHc---CCeEEEEeCCc
Q 018067          182 KPGMHVGVVGLGGLGHVAVKFAKAM---GVKVTVISTSP  217 (361)
Q Consensus       182 ~~g~~vlV~Gag~vG~~a~~la~~~---g~~vi~~~~~~  217 (361)
                      +.+++++|+|+|.+|.=++.++..+   |.+|.++.+.+
T Consensus        16 ~~p~~v~IiGgG~ig~E~A~~l~~~~~~g~~Vtli~~~~   54 (117)
T d1feca2          16 EAPKRALCVGGGYISIEFAGIFNAYKARGGQVDLAYRGD   54 (117)
T ss_dssp             SCCSEEEEECSSHHHHHHHHHHHHHSCTTCEEEEEESSS
T ss_pred             ccCCeEEEECCChHHHHHHHHhHhhcccccccceecccc
Confidence            3458899999999999888876654   78998888764

>d1djqa2 c.3.1.1 (A:490-645) Trimethylamine dehydrogenase, C-terminal domain {Methylophilus methylotrophus, w3a1 [TaxId: 17]}

class: Alpha and beta proteins (a/b)
fold: FAD/NAD(P)-binding domain
superfamily: FAD/NAD(P)-binding domain
family: C-terminal domain of adrenodoxin reductase-like
domain: Trimethylamine dehydrogenase, C-terminal domain
species: Methylophilus methylotrophus, w3a1 [TaxId: 17]

Probab=87.70  E-value=0.5  Score=35.24  Aligned_cols=48  Identities=19%  Similarity=0.140  Sum_probs=38.9

Q ss_pred             hhhhhhHhhhcCCCCCCCEEEEE--cCChHHHHHHHHHHHcCCeEEEEeCCc
Q 018067          168 GITVYSPLRFYGLDKPGMHVGVV--GLGGLGHVAVKFAKAMGVKVTVISTSP  217 (361)
Q Consensus       168 ~~ta~~~l~~~~~~~~g~~vlV~--Gag~vG~~a~~la~~~g~~vi~~~~~~  217 (361)
                      ..|....+.  .+..+++.++|+  |+|-+|+-+++.+...|.+|.++.+.+
T Consensus        25 v~t~~d~l~--~~~~~~~~vvi~d~ggg~ig~e~A~~la~~G~~Vtlv~~~~   74 (156)
T d1djqa2          25 QLTPEQVMD--GKKKIGKRVVILNADTYFMAPSLAEKLATAGHEVTIVSGVH   74 (156)
T ss_dssp             EECHHHHHH--TCSCCCSEEEEEECCCSSHHHHHHHHHHHTTCEEEEEESSC
T ss_pred             EECHHHHhc--CccccCCceEEEecCCChHHHHHHHHHHHcCCeEEEEecCC
Confidence            345566654  345788888887  779999999999999999999998865

>d2gv8a1 c.3.1.5 (A:3-180,A:288-444) Flavin-dependent monoxygenase SPBP16F5.08c {Schizosaccharomyces pombe [TaxId: 4896]}

class: Alpha and beta proteins (a/b)
fold: FAD/NAD(P)-binding domain
superfamily: FAD/NAD(P)-binding domain
family: FAD/NAD-linked reductases, N-terminal and central domains
domain: Flavin-dependent monoxygenase SPBP16F5.08c
species: Schizosaccharomyces pombe [TaxId: 4896]

Probab=87.51  E-value=0.29  Score=41.73  Aligned_cols=33  Identities=24%  Similarity=0.286  Sum_probs=27.0

Q ss_pred             CEEEEEcCChHHHHHHHHHHHcC--CeEEEEeCCc
Q 018067          185 MHVGVVGLGGLGHVAVKFAKAMG--VKVTVISTSP  217 (361)
Q Consensus       185 ~~vlV~Gag~vG~~a~~la~~~g--~~vi~~~~~~  217 (361)
                      ++|+|+|||..|++++..++..|  .+|++..+.+
T Consensus         5 KrVaIIGaG~sGl~~A~~L~~~~~~~~v~vfEk~~   39 (335)
T d2gv8a1           5 RKIAIIGAGPSGLVTAKALLAEKAFDQVTLFERRG   39 (335)
T ss_dssp             CEEEEECCSHHHHHHHHHHHTTTCCSEEEEECSSS
T ss_pred             CeEEEECcCHHHHHHHHHHHHhCCCCCEEEEECCC
Confidence            57999999999999987666554  5898888775

>d1ojua1 c.2.1.5 (A:22-163) Malate dehydrogenase {Archaeon Archaeoglobus fulgidus [TaxId: 2234]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: LDH N-terminal domain-like
domain: Malate dehydrogenase
species: Archaeon Archaeoglobus fulgidus [TaxId: 2234]

Probab=87.50  E-value=1.7  Score=31.77  Aligned_cols=69  Identities=13%  Similarity=0.134  Sum_probs=43.8

Q ss_pred             EEEEEcCChHHHHHHHHHHHcCC--eEEEEeCCchhHHHHHHHc-------CC-CEEecCCCHHHHHHhcCCccEEEEcC
Q 018067          186 HVGVVGLGGLGHVAVKFAKAMGV--KVTVISTSPSKKSEAIERL-------GA-DSFLVSRDQDEMQAAMGTMDGIIDTV  255 (361)
Q Consensus       186 ~vlV~Gag~vG~~a~~la~~~g~--~vi~~~~~~~~~~~~~~~~-------g~-~~vv~~~~~~~~~~~~~g~d~vid~~  255 (361)
                      +|.|+|+|.+|...+..+...+.  ++.+++..+++....+.++       +. ..+....+.    +...+.|+|+-++
T Consensus         2 KI~IIGaG~VG~~~a~~l~~~~~~~elvL~Di~~~~~~g~alDl~~~~~~~~~~~~i~~~~d~----~~~~~adiVvita   77 (142)
T d1ojua1           2 KLGFVGAGRVGSTSAFTCLLNLDVDEIALVDIAEDLAVGEAMDLAHAAAGIDKYPKIVGGADY----SLLKGSEIIVVTA   77 (142)
T ss_dssp             EEEEECCSHHHHHHHHHHHHHSCCSEEEEECSSHHHHHHHHHHHHHHHHTTTCCCEEEEESCG----GGGTTCSEEEECC
T ss_pred             EEEEECcCHHHHHHHHHHHhcCcCceEEEEecccchhhHHHHHHhhhccccCCCCccccCCCH----HHhccccEEEEec
Confidence            57889999999999998887765  6888887766543322222       21 122222221    2345789998888


Q ss_pred             CCc
Q 018067          256 SAV  258 (361)
Q Consensus       256 g~~  258 (361)
                      |.+
T Consensus        78 g~~   80 (142)
T d1ojua1          78 GLA   80 (142)
T ss_dssp             CCC
T ss_pred             ccc
Confidence            753

>d1cjca2 c.4.1.1 (A:6-106,A:332-460) Adrenodoxin reductase of mitochondrial p450 systems {Cow (Bos taurus) [TaxId: 9913]}

class: Alpha and beta proteins (a/b)
fold: Nucleotide-binding domain
superfamily: Nucleotide-binding domain
family: N-terminal domain of adrenodoxin reductase-like
domain: Adrenodoxin reductase of mitochondrial p450 systems
species: Cow (Bos taurus) [TaxId: 9913]

Probab=87.36  E-value=0.31  Score=38.96  Aligned_cols=32  Identities=19%  Similarity=0.246  Sum_probs=26.7

Q ss_pred             EEEEEcCChHHHHHHHHHHH--cCCeEEEEeCCc
Q 018067          186 HVGVVGLGGLGHVAVKFAKA--MGVKVTVISTSP  217 (361)
Q Consensus       186 ~vlV~Gag~vG~~a~~la~~--~g~~vi~~~~~~  217 (361)
                      +|+|+|+|+.|+.++..++.  .|.+|+++...+
T Consensus         3 kv~iIGaGpaGl~aA~~L~~~~~~~~V~v~e~~~   36 (230)
T d1cjca2           3 QICVVGSGPAGFYTAQHLLKHHSRAHVDIYEKQL   36 (230)
T ss_dssp             EEEEECCSHHHHHHHHHHHHHCSSCEEEEECSSS
T ss_pred             eEEEECccHHHHHHHHHHHhcCCCCeEEEEeCCC
Confidence            69999999999999986654  477999987764

>d1e6ua_ c.2.1.2 (A:) GDP-4-keto-6-deoxy-d-mannose epimerase/reductase (GDP-fucose synthetase) {Escherichia coli [TaxId: 562]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Tyrosine-dependent oxidoreductases
domain: GDP-4-keto-6-deoxy-d-mannose epimerase/reductase (GDP-fucose synthetase)
species: Escherichia coli [TaxId: 562]

Probab=87.21  E-value=0.45  Score=39.86  Aligned_cols=59  Identities=17%  Similarity=0.160  Sum_probs=40.5

Q ss_pred             CEEEEEcC-ChHHHHHHHHHHHcCCeEEEEeCCchhHHHHHHHcCCCEEecCCCHHHHHHhc--CCccEEEEcCCC
Q 018067          185 MHVGVVGL-GGLGHVAVKFAKAMGVKVTVISTSPSKKSEAIERLGADSFLVSRDQDEMQAAM--GTMDGIIDTVSA  257 (361)
Q Consensus       185 ~~vlV~Ga-g~vG~~a~~la~~~g~~vi~~~~~~~~~~~~~~~~g~~~vv~~~~~~~~~~~~--~g~d~vid~~g~  257 (361)
                      ++|||+|+ |-+|...+..+...|..+++++...+              ++..+.+.+..+.  ..+|.++.+++.
T Consensus         3 kkIlITG~tGfiG~~l~~~L~~~g~~vi~~~~~~~--------------~~~~~~~~~~~~~~~~~~d~v~~~a~~   64 (315)
T d1e6ua_           3 QRVFIAGHRGMVGSAIRRQLEQRGDVELVLRTRDE--------------LNLLDSRAVHDFFASERIDQVYLAAAK   64 (315)
T ss_dssp             EEEEEETTTSHHHHHHHHHHTTCTTEEEECCCTTT--------------CCTTCHHHHHHHHHHHCCSEEEECCCC
T ss_pred             CEEEEEcCCcHHHHHHHHHHHHCcCEEEEecCchh--------------ccccCHHHHHHHHhhcCCCEEEEcchh
Confidence            47999998 99999999999999998877654322              2333444443332  267888877643

>d1lqta2 c.4.1.1 (A:2-108,A:325-456) Ferredoxin:NADP reductase FprA {Mycobacterium tuberculosis [TaxId: 1773]}

class: Alpha and beta proteins (a/b)
fold: Nucleotide-binding domain
superfamily: Nucleotide-binding domain
family: N-terminal domain of adrenodoxin reductase-like
domain: Ferredoxin:NADP reductase FprA
species: Mycobacterium tuberculosis [TaxId: 1773]

Probab=87.19  E-value=0.21  Score=39.98  Aligned_cols=33  Identities=18%  Similarity=0.255  Sum_probs=27.6

Q ss_pred             CEEEEEcCChHHHHHHHHHHHcC-------CeEEEEeCCc
Q 018067          185 MHVGVVGLGGLGHVAVKFAKAMG-------VKVTVISTSP  217 (361)
Q Consensus       185 ~~vlV~Gag~vG~~a~~la~~~g-------~~vi~~~~~~  217 (361)
                      -+|+|+|+|+.|++++..+...|       .+|.+....+
T Consensus         3 ~~VaVIGaGpaGL~aA~~L~~~G~~~~~~~~~V~v~E~~~   42 (239)
T d1lqta2           3 YYIAIVGSGPSAFFAAASLLKAADTTEDLDMAVDMLEMLP   42 (239)
T ss_dssp             EEEEEECCSHHHHHHHHHHHHHHHHSTTCCEEEEEEESSS
T ss_pred             cEEEEECcCHHHHHHHHHHHHcCCccccCCCceEEEecCC
Confidence            47999999999999998887766       5788887754

>d1n2sa_ c.2.1.2 (A:) dTDP-6-deoxy-L-lyxo-4-hexulose reductase (RmlD) {Salmonella enterica serovar typhimurium [TaxId: 90371]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Tyrosine-dependent oxidoreductases
domain: dTDP-6-deoxy-L-lyxo-4-hexulose reductase (RmlD)
species: Salmonella enterica serovar typhimurium [TaxId: 90371]

Probab=86.99  E-value=0.28  Score=40.59  Aligned_cols=60  Identities=10%  Similarity=0.161  Sum_probs=39.6

Q ss_pred             EEEEEcC-ChHHHHHHHHHHHcCCeEEEEeCCchhHHHHHHHcCCCEEecCCCHHHHHHhcC--CccEEEEcCCC
Q 018067          186 HVGVVGL-GGLGHVAVKFAKAMGVKVTVISTSPSKKSEAIERLGADSFLVSRDQDEMQAAMG--TMDGIIDTVSA  257 (361)
Q Consensus       186 ~vlV~Ga-g~vG~~a~~la~~~g~~vi~~~~~~~~~~~~~~~~g~~~vv~~~~~~~~~~~~~--g~d~vid~~g~  257 (361)
                      +|||.|+ |-+|...+..+...|. ++.++.....       +-    .|..+.+.+.++..  .+|+||++++.
T Consensus         2 KILItG~tGfiG~~l~~~L~~~g~-~v~~~~~~~~-------~~----~Dl~~~~~~~~~i~~~~~D~Vih~Aa~   64 (298)
T d1n2sa_           2 NILLFGKTGQVGWELQRSLAPVGN-LIALDVHSKE-------FC----GDFSNPKGVAETVRKLRPDVIVNAAAH   64 (298)
T ss_dssp             EEEEECTTSHHHHHHHHHTTTTSE-EEEECTTCSS-------SC----CCTTCHHHHHHHHHHHCCSEEEECCCC
T ss_pred             EEEEECCCCHHHHHHHHHHHhCCC-EEEEECCCcc-------cc----CcCCCHHHHHHHHHHcCCCEEEEeccc
Confidence            5999998 9999999888877774 4444443321       11    23445555555432  68999999874

>d1h6va1 c.3.1.5 (A:10-170,A:293-366) Mammalian thioredoxin reductase {Rat (Rattus norvegicus) [TaxId: 10116]}

class: Alpha and beta proteins (a/b)
fold: FAD/NAD(P)-binding domain
superfamily: FAD/NAD(P)-binding domain
family: FAD/NAD-linked reductases, N-terminal and central domains
domain: Mammalian thioredoxin reductase
species: Rat (Rattus norvegicus) [TaxId: 10116]

Probab=86.76  E-value=0.28  Score=39.32  Aligned_cols=29  Identities=31%  Similarity=0.312  Sum_probs=27.1

Q ss_pred             EEEEcCChHHHHHHHHHHHcCCeEEEEeC
Q 018067          187 VGVVGLGGLGHVAVKFAKAMGVKVTVIST  215 (361)
Q Consensus       187 vlV~Gag~vG~~a~~la~~~g~~vi~~~~  215 (361)
                      |+|+|+|+.|+.++..|...|.+|.++..
T Consensus         6 viVIG~GpaGl~aA~~aa~~G~kV~viE~   34 (235)
T d1h6va1           6 LIIIGGGSGGLAAAKEAAKFDKKVMVLDF   34 (235)
T ss_dssp             EEEECCSHHHHHHHHHHGGGCCCEEEECC
T ss_pred             EEEECCCHHHHHHHHHHHHCCCeEEEEec
Confidence            78999999999999999999999999974

>d1dusa_ c.66.1.4 (A:) Hypothetical protein MJ0882 {Archaeon Methanococcus jannaschii [TaxId: 2190]}

class: Alpha and beta proteins (a/b)
fold: S-adenosyl-L-methionine-dependent methyltransferases
superfamily: S-adenosyl-L-methionine-dependent methyltransferases
family: Hypothetical protein MJ0882
domain: Hypothetical protein MJ0882
species: Archaeon Methanococcus jannaschii [TaxId: 2190]

Probab=86.63  E-value=0.39  Score=37.46  Aligned_cols=94  Identities=17%  Similarity=0.094  Sum_probs=56.1

Q ss_pred             CCCCCCCEEEEEcCChHHHHHHHHHHHcCCeEEEEeCCchhHHHHHH---HcCCC----EEecCCCHHHHHHhc-CCccE
Q 018067          179 GLDKPGMHVGVVGLGGLGHVAVKFAKAMGVKVTVISTSPSKKSEAIE---RLGAD----SFLVSRDQDEMQAAM-GTMDG  250 (361)
Q Consensus       179 ~~~~~g~~vlV~Gag~vG~~a~~la~~~g~~vi~~~~~~~~~~~~~~---~~g~~----~vv~~~~~~~~~~~~-~g~d~  250 (361)
                      ....++++||=+|+|. |..++.+++ .+.+|++++-++.....+.+   ..+..    .++..+..+   ... +.+|+
T Consensus        48 l~~~~~~~VLDiGcG~-G~~~~~la~-~~~~v~~iD~s~~~i~~a~~n~~~~~l~~~~i~~~~~d~~~---~~~~~~fD~  122 (194)
T d1dusa_          48 VVVDKDDDILDLGCGY-GVIGIALAD-EVKSTTMADINRRAIKLAKENIKLNNLDNYDIRVVHSDLYE---NVKDRKYNK  122 (194)
T ss_dssp             CCCCTTCEEEEETCTT-SHHHHHHGG-GSSEEEEEESCHHHHHHHHHHHHHTTCTTSCEEEEECSTTT---TCTTSCEEE
T ss_pred             CCcCCCCeEEEEeecC-ChhHHHHHh-hccccceeeeccccchhHHHHHHHhCCccceEEEEEcchhh---hhccCCceE
Confidence            3468899999998754 555556665 46799999888765444422   33331    122211111   122 36999


Q ss_pred             EEEcCC----C---cccHHHHHhccccCCEEEEe
Q 018067          251 IIDTVS----A---VHPLMPLIGLLKSQGKLVLV  277 (361)
Q Consensus       251 vid~~g----~---~~~~~~~~~~l~~~G~~v~~  277 (361)
                      |+-...    .   ...+..+.+.|+++|+++.+
T Consensus       123 Ii~~~p~~~~~~~~~~~l~~~~~~LkpgG~l~i~  156 (194)
T d1dusa_         123 IITNPPIRAGKEVLHRIIEEGKELLKDNGEIWVV  156 (194)
T ss_dssp             EEECCCSTTCHHHHHHHHHHHHHHEEEEEEEEEE
T ss_pred             EEEcccEEecchhhhhHHHHHHHhcCcCcEEEEE
Confidence            986322    1   12356778899999998654

>d1qo8a2 c.3.1.4 (A:103-359,A:506-565) Flavocytochrome c3 (respiratory fumarate reductase) {Shewanella frigidimarina [TaxId: 56812]}

class: Alpha and beta proteins (a/b)
fold: FAD/NAD(P)-binding domain
superfamily: FAD/NAD(P)-binding domain
family: Succinate dehydrogenase/fumarate reductase flavoprotein N-terminal domain
domain: Flavocytochrome c3 (respiratory fumarate reductase)
species: Shewanella frigidimarina [TaxId: 56812]

Probab=86.48  E-value=0.29  Score=41.37  Aligned_cols=33  Identities=36%  Similarity=0.485  Sum_probs=29.0

Q ss_pred             CEEEEEcCChHHHHHHHHHHHcCCeEEEEeCCc
Q 018067          185 MHVGVVGLGGLGHVAVKFAKAMGVKVTVISTSP  217 (361)
Q Consensus       185 ~~vlV~Gag~vG~~a~~la~~~g~~vi~~~~~~  217 (361)
                      -.|+|+|+|..|+.++.-|...|++|+++...+
T Consensus        20 ~DVvVIGaG~aGl~AA~~aa~~G~~V~vlEK~~   52 (317)
T d1qo8a2          20 TQVLVVGAGSAGFNASLAAKKAGANVILVDKAP   52 (317)
T ss_dssp             EEEEEECCSHHHHHHHHHHHHHTCCEEEECSSS
T ss_pred             cCEEEECcCHHHHHHHHHHHHCCCcEEEEeCCC
Confidence            348999999999999999999999999997643

>d2cvoa1 c.2.1.3 (A:68-218,A:384-415) Putative semialdehyde dehydrogenase {Rice (Oryza sativa) [TaxId: 4530]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Glyceraldehyde-3-phosphate dehydrogenase-like, N-terminal domain
domain: Putative semialdehyde dehydrogenase
species: Rice (Oryza sativa) [TaxId: 4530]

Probab=86.45  E-value=0.4  Score=37.13  Aligned_cols=93  Identities=14%  Similarity=0.100  Sum_probs=53.7

Q ss_pred             EEEEEcC-ChHHHHHHHHHHHc-CCeEEEEeCCchhHHHHHHHcCCCEEec-CCCHHHHHHhcCCccEEEEcCCCcccHH
Q 018067          186 HVGVVGL-GGLGHVAVKFAKAM-GVKVTVISTSPSKKSEAIERLGADSFLV-SRDQDEMQAAMGTMDGIIDTVSAVHPLM  262 (361)
Q Consensus       186 ~vlV~Ga-g~vG~~a~~la~~~-g~~vi~~~~~~~~~~~~~~~~g~~~vv~-~~~~~~~~~~~~g~d~vid~~g~~~~~~  262 (361)
                      +|.|+|+ |-+|+-.++++..+ ..++..+.+.+.....+.+........+ ............+.|++|-+.++.. ..
T Consensus         7 kVaIlGATGyvG~elirLL~~HP~~ei~~l~S~~~aG~~~~~~~~~~~~~~~~~~~~~~~~~~~~~Dvvf~alp~~~-s~   85 (183)
T d2cvoa1           7 RIAVLGASGYTGAEIVRLLANHPQFRIKVMTADRKAGEQFGSVFPHLITQDLPNLVAVKDADFSNVDAVFCCLPHGT-TQ   85 (183)
T ss_dssp             EEEEESCSSHHHHHHHHHHTTCSSEEEEEEECSTTTTSCHHHHCGGGTTSCCCCCBCGGGCCGGGCSEEEECCSSSH-HH
T ss_pred             EEEEECcccHHHHHHHHHHHhCCCceEEEEeccccCCCccccccccccccccccchhhhhhhhcccceeeeccccch-HH
Confidence            5789998 99999999999887 4476666544332222211111000000 0000111112247999999999987 44


Q ss_pred             HHHhccccCCEEEEecC
Q 018067          263 PLIGLLKSQGKLVLVGA  279 (361)
Q Consensus       263 ~~~~~l~~~G~~v~~g~  279 (361)
                      .....+...+.++....
T Consensus        86 ~~~~~l~~~~~~v~~~~  102 (183)
T d2cvoa1          86 EIIKGLPQELKIVDLSA  102 (183)
T ss_dssp             HHHHTSCSSCEEEECSS
T ss_pred             HHHHHHHhcCcccccch
Confidence            45566777788777654

>d1ek6a_ c.2.1.2 (A:) Uridine diphosphogalactose-4-epimerase (UDP-galactose 4-epimerase) {Human (Homo sapiens) [TaxId: 9606]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Tyrosine-dependent oxidoreductases
domain: Uridine diphosphogalactose-4-epimerase (UDP-galactose 4-epimerase)
species: Human (Homo sapiens) [TaxId: 9606]

Probab=86.38  E-value=1.3  Score=37.48  Aligned_cols=72  Identities=22%  Similarity=0.187  Sum_probs=46.3

Q ss_pred             CEEEEEcC-ChHHHHHHHHHHHcCCeEEEEeCC----------chhHHHHHHHcCC--CEE--ecCCCHHHHHHhc--CC
Q 018067          185 MHVGVVGL-GGLGHVAVKFAKAMGVKVTVISTS----------PSKKSEAIERLGA--DSF--LVSRDQDEMQAAM--GT  247 (361)
Q Consensus       185 ~~vlV~Ga-g~vG~~a~~la~~~g~~vi~~~~~----------~~~~~~~~~~~g~--~~v--v~~~~~~~~~~~~--~g  247 (361)
                      ++|||+|+ |-+|...+..+...|.+|+++++.          .+....+ +.+..  -.+  .|-.+.+.+....  ..
T Consensus         3 kKILITG~tGfIGs~lv~~Ll~~g~~V~~ld~~~~~~~~~~~~~~~~~~~-~~~~~~~~~~~~~Dl~d~~~l~~~~~~~~   81 (346)
T d1ek6a_           3 EKVLVTGGAGYIGSHTVLELLEAGYLPVVIDNFHNAFRGGGSLPESLRRV-QELTGRSVEFEEMDILDQGALQRLFKKYS   81 (346)
T ss_dssp             SEEEEETTTSHHHHHHHHHHHHTTCCEEEEECSSSSCBCSSSSBHHHHHH-HHHHTCCCEEEECCTTCHHHHHHHHHHCC
T ss_pred             CeEEEECCCcHHHHHHHHHHHHCcCEEEEEECCCccccccccchHHHHHH-HHhcCCCcEEEEeeccccccccccccccc
Confidence            68999998 999999999999999999998631          1122222 22211  122  2445555555543  36


Q ss_pred             ccEEEEcCCC
Q 018067          248 MDGIIDTVSA  257 (361)
Q Consensus       248 ~d~vid~~g~  257 (361)
                      .++++.+++.
T Consensus        82 ~~~i~h~Aa~   91 (346)
T d1ek6a_          82 FMAVIHFAGL   91 (346)
T ss_dssp             EEEEEECCSC
T ss_pred             cccccccccc
Confidence            7888888764

>d1qzza2 c.66.1.12 (A:102-357) Aclacinomycin-10-hydroxylase RdmB {Streptomyces purpurascens [TaxId: 1924]}

class: Alpha and beta proteins (a/b)
fold: S-adenosyl-L-methionine-dependent methyltransferases
superfamily: S-adenosyl-L-methionine-dependent methyltransferases
family: Plant O-methyltransferase, C-terminal domain
domain: Aclacinomycin-10-hydroxylase RdmB
species: Streptomyces purpurascens [TaxId: 1924]

Probab=86.35  E-value=0.44  Score=39.05  Aligned_cols=96  Identities=19%  Similarity=0.149  Sum_probs=58.2

Q ss_pred             CCCCCCEEEEEcCChHHHHHHHHHHHc-CCeEEEEeCCchhHHHH---HHHcCCC-E-EecCCCHHHHHHhcCCccEEEE
Q 018067          180 LDKPGMHVGVVGLGGLGHVAVKFAKAM-GVKVTVISTSPSKKSEA---IERLGAD-S-FLVSRDQDEMQAAMGTMDGIID  253 (361)
Q Consensus       180 ~~~~g~~vlV~Gag~vG~~a~~la~~~-g~~vi~~~~~~~~~~~~---~~~~g~~-~-vv~~~~~~~~~~~~~g~d~vid  253 (361)
                      .+....+||=+|+|. |..++.+++.. +.++++++. ++-....   .++.|.. . .+...+  .......++|+++-
T Consensus        78 d~~~~~~vlDvG~G~-G~~~~~l~~~~P~~~~~~~Dl-p~~~~~a~~~~~~~~~~~ri~~~~~d--~~~~~p~~~D~v~~  153 (256)
T d1qzza2          78 DWSAVRHVLDVGGGN-GGMLAAIALRAPHLRGTLVEL-AGPAERARRRFADAGLADRVTVAEGD--FFKPLPVTADVVLL  153 (256)
T ss_dssp             CCTTCCEEEEETCTT-SHHHHHHHHHCTTCEEEEEEC-HHHHHHHHHHHHHTTCTTTEEEEECC--TTSCCSCCEEEEEE
T ss_pred             CCccCCEEEEECCCC-CHHHHHHHHhhcCcEEEEecC-hHHHHHHHHHHhhcCCcceeeeeeee--ccccccccchhhhc
Confidence            356778888888864 78899999987 679988885 3322222   2333432 1 111111  11123347888864


Q ss_pred             cC-----CCc---ccHHHHHhccccCCEEEEecC
Q 018067          254 TV-----SAV---HPLMPLIGLLKSQGKLVLVGA  279 (361)
Q Consensus       254 ~~-----g~~---~~~~~~~~~l~~~G~~v~~g~  279 (361)
                      .-     ..+   ..+..+.+.|+|+|+++.+..
T Consensus       154 ~~vLh~~~d~~~~~lL~~i~~~LkpgG~llI~d~  187 (256)
T d1qzza2         154 SFVLLNWSDEDALTILRGCVRALEPGGRLLVLDR  187 (256)
T ss_dssp             ESCGGGSCHHHHHHHHHHHHHHEEEEEEEEEEEC
T ss_pred             cccccccCcHHHHHHHHHHHhhcCCcceeEEEEe
Confidence            32     111   236678889999999998864

>d1hyha1 c.2.1.5 (A:21-166) L-2-hydroxyisocapronate dehydrogenase, L-HICDH {Lactobacillus confusus [TaxId: 1583]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: LDH N-terminal domain-like
domain: L-2-hydroxyisocapronate dehydrogenase, L-HICDH
species: Lactobacillus confusus [TaxId: 1583]

Probab=86.13  E-value=0.74  Score=34.11  Aligned_cols=70  Identities=26%  Similarity=0.374  Sum_probs=43.6

Q ss_pred             CEEEEEcCChHHHHHHHHHHHcCC--eEEEEeCCchhHHHHHHHc-------CCCEEecCCCHHHHHHhcCCccEEEEcC
Q 018067          185 MHVGVVGLGGLGHVAVKFAKAMGV--KVTVISTSPSKKSEAIERL-------GADSFLVSRDQDEMQAAMGTMDGIIDTV  255 (361)
Q Consensus       185 ~~vlV~Gag~vG~~a~~la~~~g~--~vi~~~~~~~~~~~~~~~~-------g~~~vv~~~~~~~~~~~~~g~d~vid~~  255 (361)
                      ++|.|+|+|.+|..++..+...|.  +++.++..+++....+.++       +....+...+.    +...+.|+|+-++
T Consensus         2 kKI~IIGaG~VG~~~a~~l~~~~~~~elvL~Di~~~~~~g~~~Dl~~a~~~~~~~~~~~~~d~----~~l~~adiVVita   77 (146)
T d1hyha1           2 RKIGIIGLGNVGAAVAHGLIAQGVADDYVFIDANEAKVKADQIDFQDAMANLEAHGNIVINDW----AALADADVVISTL   77 (146)
T ss_dssp             CEEEEECCSHHHHHHHHHHHHHTCCSEEEEECSSHHHHHHHHHHHHHHGGGSSSCCEEEESCG----GGGTTCSEEEECC
T ss_pred             CeEEEECcCHHHHHHHHHHHhcCCCceEEEEecccchhhhHHHhhhccccccCCccceeccCH----HHhccccEEEEec
Confidence            578999999999999988877764  7888887766543332222       11111111221    1234788888887


Q ss_pred             CCc
Q 018067          256 SAV  258 (361)
Q Consensus       256 g~~  258 (361)
                      |.+
T Consensus        78 G~~   80 (146)
T d1hyha1          78 GNI   80 (146)
T ss_dssp             SCG
T ss_pred             ccc
Confidence            753

>d1gtea3 c.3.1.1 (A:288-440) Dihydropyrimidine dehydrogenase, domain 3 {Pig (Sus scrofa) [TaxId: 9823]}

class: Alpha and beta proteins (a/b)
fold: FAD/NAD(P)-binding domain
superfamily: FAD/NAD(P)-binding domain
family: C-terminal domain of adrenodoxin reductase-like
domain: Dihydropyrimidine dehydrogenase, domain 3
species: Pig (Sus scrofa) [TaxId: 9823]

Probab=86.13  E-value=0.65  Score=34.71  Aligned_cols=36  Identities=19%  Similarity=0.116  Sum_probs=29.3

Q ss_pred             CCCCEEEEEcCChHHHHHHHHHHHcCC-eEEEEeCCc
Q 018067          182 KPGMHVGVVGLGGLGHVAVKFAKAMGV-KVTVISTSP  217 (361)
Q Consensus       182 ~~g~~vlV~Gag~vG~~a~~la~~~g~-~vi~~~~~~  217 (361)
                      .-+++|+|+|+|-+|.=++..|...|+ .|+++.+.+
T Consensus        43 ~~~~kVvVIGGGdtA~D~A~~a~r~GA~~V~vi~rr~   79 (153)
T d1gtea3          43 SIRGAVIVLGAGDTAFDCATSALRCGARRVFLVFRKG   79 (153)
T ss_dssp             CCCSEEEEECSSHHHHHHHHHHHHTTCSEEEEECSSC
T ss_pred             cCCCEEEEECCChhHHHHHHHHHHcCCcceeEEEeCC
Confidence            356789999999999999999999998 566766543

>d1pj5a2 c.3.1.2 (A:4-219,A:339-427) N,N-dimethylglycine oxidase {Arthrobacter globiformis [TaxId: 1665]}

class: Alpha and beta proteins (a/b)
fold: FAD/NAD(P)-binding domain
superfamily: FAD/NAD(P)-binding domain
family: FAD-linked reductases, N-terminal domain
domain: N,N-dimethylglycine oxidase
species: Arthrobacter globiformis [TaxId: 1665]

Probab=85.97  E-value=0.35  Score=40.38  Aligned_cols=31  Identities=19%  Similarity=0.313  Sum_probs=26.7

Q ss_pred             EEEEEcCChHHHHHHHHHHHcCC-eEEEEeCC
Q 018067          186 HVGVVGLGGLGHVAVKFAKAMGV-KVTVISTS  216 (361)
Q Consensus       186 ~vlV~Gag~vG~~a~~la~~~g~-~vi~~~~~  216 (361)
                      .|+|+|+|.+|++++.-+...|. +|.++++.
T Consensus         3 dViIIGaGi~G~s~A~~La~~G~~~V~liE~~   34 (305)
T d1pj5a2           3 RIVIIGAGIVGTNLADELVTRGWNNITVLDQG   34 (305)
T ss_dssp             CEEEECCSHHHHHHHHHHHHTTCCCEEEECSS
T ss_pred             CEEEECcCHHHHHHHHHHHHcCCCcEEEEeCC
Confidence            49999999999999988878886 69888765

>d2bs2a2 c.3.1.4 (A:1-250,A:372-457) Fumarate reductase {Wolinella succinogenes [TaxId: 844]}

class: Alpha and beta proteins (a/b)
fold: FAD/NAD(P)-binding domain
superfamily: FAD/NAD(P)-binding domain
family: Succinate dehydrogenase/fumarate reductase flavoprotein N-terminal domain
domain: Fumarate reductase
species: Wolinella succinogenes [TaxId: 844]

Probab=85.76  E-value=0.34  Score=41.10  Aligned_cols=31  Identities=29%  Similarity=0.290  Sum_probs=28.3

Q ss_pred             EEEEcCChHHHHHHHHHHHcCCeEEEEeCCc
Q 018067          187 VGVVGLGGLGHVAVKFAKAMGVKVTVISTSP  217 (361)
Q Consensus       187 vlV~Gag~vG~~a~~la~~~g~~vi~~~~~~  217 (361)
                      |+|+|+|..|+.++.-|...|++|+++....
T Consensus         8 VvVIG~G~AGl~AAl~aa~~G~~V~liEK~~   38 (336)
T d2bs2a2           8 SLVIGGGLAGLRAAVATQQKGLSTIVLSLIP   38 (336)
T ss_dssp             EEEECCSHHHHHHHHHHHTTTCCEEEECSSC
T ss_pred             EEEECcCHHHHHHHHHHHHCCCCEEEEecCC
Confidence            8999999999999999999999999997654

>d1d4ca2 c.3.1.4 (A:103-359,A:506-570) Flavocytochrome c3 (respiratory fumarate reductase) {Shewanella putrefaciens [TaxId: 24]}

class: Alpha and beta proteins (a/b)
fold: FAD/NAD(P)-binding domain
superfamily: FAD/NAD(P)-binding domain
family: Succinate dehydrogenase/fumarate reductase flavoprotein N-terminal domain
domain: Flavocytochrome c3 (respiratory fumarate reductase)
species: Shewanella putrefaciens [TaxId: 24]

Probab=85.65  E-value=0.35  Score=40.89  Aligned_cols=32  Identities=34%  Similarity=0.579  Sum_probs=28.8

Q ss_pred             EEEEEcCChHHHHHHHHHHHcCCeEEEEeCCc
Q 018067          186 HVGVVGLGGLGHVAVKFAKAMGVKVTVISTSP  217 (361)
Q Consensus       186 ~vlV~Gag~vG~~a~~la~~~g~~vi~~~~~~  217 (361)
                      .|+|+|+|..|+.++..|...|++|+++...+
T Consensus        25 DVvVIG~G~aGl~aA~~la~~G~~V~llEk~~   56 (322)
T d1d4ca2          25 DVVIIGSGGAGLAAAVSARDAGAKVILLEKEP   56 (322)
T ss_dssp             SEEEECSSHHHHHHHHHHHTTTCCEEEECSSS
T ss_pred             eEEEECcCHHHHHHHHHHHHCCCcEEEEeCCC
Confidence            49999999999999999999999999998653

>d1aoga2 c.3.1.5 (A:170-286) Trypanothione reductase {Trypanosoma cruzi [TaxId: 5693]}

class: Alpha and beta proteins (a/b)
fold: FAD/NAD(P)-binding domain
superfamily: FAD/NAD(P)-binding domain
family: FAD/NAD-linked reductases, N-terminal and central domains
domain: Trypanothione reductase
species: Trypanosoma cruzi [TaxId: 5693]

Probab=85.46  E-value=0.61  Score=32.97  Aligned_cols=36  Identities=22%  Similarity=0.107  Sum_probs=28.8

Q ss_pred             CCCCEEEEEcCChHHHHHHHHHHHcC---CeEEEEeCCc
Q 018067          182 KPGMHVGVVGLGGLGHVAVKFAKAMG---VKVTVISTSP  217 (361)
Q Consensus       182 ~~g~~vlV~Gag~vG~~a~~la~~~g---~~vi~~~~~~  217 (361)
                      +.+++++|+|+|.+|.=++..++.++   .+|.++.+.+
T Consensus        18 ~~p~~v~ivGgG~ig~E~A~~l~~l~~~~~~Vtli~~~~   56 (117)
T d1aoga2          18 EPPRRVLTVGGGFISVEFAGIFNAYKPKDGQVTLCYRGE   56 (117)
T ss_dssp             SCCSEEEEECSSHHHHHHHHHHHHHCCTTCEEEEEESSS
T ss_pred             hcCCeEEEECCcHHHHHHHHHhhhcccCCcEEEEEeccc
Confidence            45689999999999999888877765   4688887654

>d1sb8a_ c.2.1.2 (A:) UDP-N-acetylglucosamine 4-epimerase WbpP {Pseudomonas aeruginosa [TaxId: 287]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Tyrosine-dependent oxidoreductases
domain: UDP-N-acetylglucosamine 4-epimerase WbpP
species: Pseudomonas aeruginosa [TaxId: 287]

Probab=85.29  E-value=3.6  Score=34.40  Aligned_cols=75  Identities=16%  Similarity=0.201  Sum_probs=47.7

Q ss_pred             CCCCEEEEEcC-ChHHHHHHHHHHHcCCeEEEEeCCch----hHHHHHHHcCC-----C-EEe--cCCCHHHHHHhcCCc
Q 018067          182 KPGMHVGVVGL-GGLGHVAVKFAKAMGVKVTVISTSPS----KKSEAIERLGA-----D-SFL--VSRDQDEMQAAMGTM  248 (361)
Q Consensus       182 ~~g~~vlV~Ga-g~vG~~a~~la~~~g~~vi~~~~~~~----~~~~~~~~~g~-----~-~vv--~~~~~~~~~~~~~g~  248 (361)
                      ...+++||.|+ |-+|...+..+...|.+|+++++...    ....+ +....     + ..+  |..+.........+.
T Consensus        14 ~~~k~iLVTG~tGfIGs~lv~~L~~~g~~V~~~d~~~~~~~~~~~~~-~~~~~~~~~~~~~~~~~d~~d~~~~~~~~~~~   92 (341)
T d1sb8a_          14 AQPKVWLITGVAGFIGSNLLETLLKLDQKVVGLDNFATGHQRNLDEV-RSLVSEKQWSNFKFIQGDIRNLDDCNNACAGV   92 (341)
T ss_dssp             HSCCEEEEETTTSHHHHHHHHHHHHTTCEEEEEECCSSCCHHHHHHH-HHHSCHHHHTTEEEEECCTTSHHHHHHHHTTC
T ss_pred             CCCCEEEEecCCCHHHHHHHHHHHHCcCEEEEEECCCCcchhhHHHH-HHhhhhcccCCeeEEeeccccccccccccccc
Confidence            45678999998 99999999999999999999875221    11122 22221     1 122  334444555555677


Q ss_pred             cEEEEcCCC
Q 018067          249 DGIIDTVSA  257 (361)
Q Consensus       249 d~vid~~g~  257 (361)
                      +.++.+...
T Consensus        93 ~~v~~~~a~  101 (341)
T d1sb8a_          93 DYVLHQAAL  101 (341)
T ss_dssp             SEEEECCSC
T ss_pred             ccccccccc
Confidence            777766543

>d1y7la1 c.79.1.1 (A:2-311) O-acetylserine sulfhydrylase (Cysteine synthase) {Haemophilus influenzae [TaxId: 727]}

class: Alpha and beta proteins (a/b)
fold: Tryptophan synthase beta subunit-like PLP-dependent enzymes
superfamily: Tryptophan synthase beta subunit-like PLP-dependent enzymes
family: Tryptophan synthase beta subunit-like PLP-dependent enzymes
domain: O-acetylserine sulfhydrylase (Cysteine synthase)
species: Haemophilus influenzae [TaxId: 727]

Probab=85.27  E-value=3  Score=34.74  Aligned_cols=57  Identities=21%  Similarity=0.189  Sum_probs=39.7

Q ss_pred             hcCCCCCCCEEEEEcCChHHHHHHHHHHHcCCeEEEEeC--CchhHHHHHHHcCCCEEe
Q 018067          177 FYGLDKPGMHVGVVGLGGLGHVAVKFAKAMGVKVTVIST--SPSKKSEAIERLGADSFL  233 (361)
Q Consensus       177 ~~~~~~~g~~vlV~Gag~vG~~a~~la~~~g~~vi~~~~--~~~~~~~~~~~~g~~~vv  233 (361)
                      +.+.+.++++|+...+|.-|++++..++..|.+.+++..  .+..+....+.+|++.+.
T Consensus        54 ~~g~~~~~~~vv~~SsGN~g~a~A~~a~~~G~~~~i~~p~~~~~~k~~~~~~~GA~vv~  112 (310)
T d1y7la1          54 KDGTLTKGKEIVDATSGNTGIALAYVAAARGYKITLTMPETMSLERKRLLCGLGVNLVL  112 (310)
T ss_dssp             HTTSSCTTCEEEESCCSHHHHHHHHHHHHHTCCEEEEEETTSCHHHHHHHHHTTCEEEE
T ss_pred             HcCCCCCCceeeeecCCCchHHHHHHHHHhhccccccchhhhhhhhhhhHHHhCCceEe
Confidence            345457777766667799999999999999986555443  333344555788887554

>d1rp0a1 c.3.1.6 (A:7-284) Thiazole biosynthetic enzyme Thi4 {Thale cress(Arabidopsis thaliana) [TaxId: 3702]}

class: Alpha and beta proteins (a/b)
fold: FAD/NAD(P)-binding domain
superfamily: FAD/NAD(P)-binding domain
family: Thi4-like
domain: Thiazole biosynthetic enzyme Thi4
species: Thale cress(Arabidopsis thaliana) [TaxId: 3702]

Probab=85.25  E-value=0.39  Score=39.66  Aligned_cols=33  Identities=36%  Similarity=0.372  Sum_probs=27.3

Q ss_pred             CEEEEEcCChHHHHHHHH-HHHcCCeEEEEeCCc
Q 018067          185 MHVGVVGLGGLGHVAVKF-AKAMGVKVTVISTSP  217 (361)
Q Consensus       185 ~~vlV~Gag~vG~~a~~l-a~~~g~~vi~~~~~~  217 (361)
                      ..|+|+|+|+.|+.++.. |+..|.+|.++...+
T Consensus        34 ~DViVIGaGpaGL~aA~~LA~~~G~~V~vlE~~~   67 (278)
T d1rp0a1          34 TDVVVVGAGSAGLSAAYEISKNPNVQVAIIEQSV   67 (278)
T ss_dssp             EEEEEECCSHHHHHHHHHHHTSTTSCEEEEESSS
T ss_pred             CCEEEECCCHHHHHHHHHHHHccCCeEEEEecCC
Confidence            449999999999988875 455699999999764

>d1tdja1 c.79.1.1 (A:5-335) Threonine deaminase {Escherichia coli [TaxId: 562]}

class: Alpha and beta proteins (a/b)
fold: Tryptophan synthase beta subunit-like PLP-dependent enzymes
superfamily: Tryptophan synthase beta subunit-like PLP-dependent enzymes
family: Tryptophan synthase beta subunit-like PLP-dependent enzymes
domain: Threonine deaminase
species: Escherichia coli [TaxId: 562]

Probab=84.81  E-value=3  Score=35.00  Aligned_cols=107  Identities=18%  Similarity=0.186  Sum_probs=65.5

Q ss_pred             hhHhhhcCCCCCCCEEEEEcCChHHHHHHHHHHHcCCeEEEEeCC--chhHHHHHHHcCCCEEecCCCHH----------
Q 018067          172 YSPLRFYGLDKPGMHVGVVGLGGLGHVAVKFAKAMGVKVTVISTS--PSKKSEAIERLGADSFLVSRDQD----------  239 (361)
Q Consensus       172 ~~~l~~~~~~~~g~~vlV~Gag~vG~~a~~la~~~g~~vi~~~~~--~~~~~~~~~~~g~~~vv~~~~~~----------  239 (361)
                      +..+.....-.+..+|+...+|..|.+++..++..|.+++++...  +..+...++.+|++-++...+.+          
T Consensus        63 ~~~i~~~~~~~~~~~vv~assGN~g~a~A~~a~~~g~~~~i~~p~~~~~~k~~~l~~~Ga~vi~~~~~~~~~~~~~~~~~  142 (331)
T d1tdja1          63 YAMMAGLTEEQKAHGVITASAGNHAQGVAFSSARLGVKALIVMPTATADIKVDAVRGFGGEVLLHGANFDEAKAKAIELS  142 (331)
T ss_dssp             HHHHHTTTTSSCSSSCEEEECSSSHHHHHHHHHHTTCCEEEECCSSCCHHHHHHHHHHSCEEECCCSSHHHHHHHHHHHH
T ss_pred             HHHHHHHHHhCCCCeeeecccchhHHHHHHhhccccccceeeccccchhHHHHHHHhcCCEEEEcCcccccchhhhhhhh
Confidence            444444433244555666667889999999999999866665543  33445556788887554433311          


Q ss_pred             ---------------H----------HHHhcCCccEEEEcCCCcccHHH---HHhccccCCEEEEec
Q 018067          240 ---------------E----------MQAAMGTMDGIIDTVSAVHPLMP---LIGLLKSQGKLVLVG  278 (361)
Q Consensus       240 ---------------~----------~~~~~~g~d~vid~~g~~~~~~~---~~~~l~~~G~~v~~g  278 (361)
                                     .          +.+....+|.+|-++|+..++..   .++.+.+.-+++.+.
T Consensus       143 ~~~~~~~~~~~~~~~~~~g~~t~~~Ei~~q~~~~D~vv~~~G~GG~~aG~~~~~~~~~~~~~ii~ve  209 (331)
T d1tdja1         143 QQQGFTWVPPFDHPMVIAGQGTLALELLQQDAHLDRVFVPVGGGGLAAGVAVLIKQLMPQIKVIAVE  209 (331)
T ss_dssp             HHHCCEECCSSCCHHHHHHHHHHHHHHHHHCTTCCEEEEECSSSHHHHHHHHHHHHHCTTCEEEEEE
T ss_pred             hcCCCccccccCChHHhhhhhhHHHHHHHhcCCCCEEEEeCChhHHHHHHHHHHHHhCCCcEEEEec
Confidence                           0          11111359999999988654443   444455677888774

>d2g17a1 c.2.1.3 (A:1-153,A:309-334) N-acetyl-gamma-glutamyl-phosphate reductase ArgC {Salmonella typhimurium [TaxId: 90371]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Glyceraldehyde-3-phosphate dehydrogenase-like, N-terminal domain
domain: N-acetyl-gamma-glutamyl-phosphate reductase ArgC
species: Salmonella typhimurium [TaxId: 90371]

Probab=84.22  E-value=0.44  Score=36.70  Aligned_cols=91  Identities=14%  Similarity=0.146  Sum_probs=54.8

Q ss_pred             EEEEEcC-ChHHHHHHHHHHHc-CCeEEEEeC-Cc-----hhHHHHHHHc-CC-C-EEecCCCHHHHHHhcCCccEEEEc
Q 018067          186 HVGVVGL-GGLGHVAVKFAKAM-GVKVTVIST-SP-----SKKSEAIERL-GA-D-SFLVSRDQDEMQAAMGTMDGIIDT  254 (361)
Q Consensus       186 ~vlV~Ga-g~vG~~a~~la~~~-g~~vi~~~~-~~-----~~~~~~~~~~-g~-~-~vv~~~~~~~~~~~~~g~d~vid~  254 (361)
                      +|.|+|+ |-+|+-.++++..+ .+++..+.. +.     ++.......+ +. + ......+   .......+|++|-+
T Consensus         3 kVaIiGATGyvG~eLlrlL~~HP~~ei~~l~~~s~~~~aGk~~~~~~~~~~~~~~~~~~~~~~---~~~~~~~~dvvf~a   79 (179)
T d2g17a1           3 NTLIVGASGYAGAELVSYVNRHPHMTITALTVSAQSNDAGKLISDLHPQLKGIVDLPLQPMSD---VRDFSADVDVVFLA   79 (179)
T ss_dssp             EEEEETTTSHHHHHHHHHHHHCTTEEEEEEEEETTCTTTTCBHHHHCGGGTTTCCCBEEEESC---GGGTCTTCCEEEEC
T ss_pred             EEEEECcccHHHHHHHHHHHhCCCCceEeeEeecccccccccccccccccccccccccccchh---hhhhhcccceeecc
Confidence            5899998 99999999999988 566654432 11     1111111111 11 1 1111111   11223478999999


Q ss_pred             CCCcccHHHHHhccccCCEEEEecC
Q 018067          255 VSAVHPLMPLIGLLKSQGKLVLVGA  279 (361)
Q Consensus       255 ~g~~~~~~~~~~~l~~~G~~v~~g~  279 (361)
                      .++..........+..+-+++..+.
T Consensus        80 lp~~~s~~~~~~~~~~~~~vIDlSa  104 (179)
T d2g17a1          80 TAHEVSHDLAPQFLQAGCVVFDLSG  104 (179)
T ss_dssp             SCHHHHHHHHHHHHHTTCEEEECSS
T ss_pred             ccchhHHHHhhhhhhcCceeecccc
Confidence            9987755566666777888888865

>d2cula1 c.3.1.7 (A:2-231) GidA-related protein TTHA1897 {Thermus thermophilus [TaxId: 274]}

class: Alpha and beta proteins (a/b)
fold: FAD/NAD(P)-binding domain
superfamily: FAD/NAD(P)-binding domain
family: GidA-like
domain: GidA-related protein TTHA1897
species: Thermus thermophilus [TaxId: 274]

Probab=84.08  E-value=0.69  Score=37.13  Aligned_cols=32  Identities=28%  Similarity=0.349  Sum_probs=29.0

Q ss_pred             EEEEcCChHHHHHHHHHHHcCCeEEEEeCCch
Q 018067          187 VGVVGLGGLGHVAVKFAKAMGVKVTVISTSPS  218 (361)
Q Consensus       187 vlV~Gag~vG~~a~~la~~~g~~vi~~~~~~~  218 (361)
                      |+|+|+|..|+-|+..+..+|+++.++..+.+
T Consensus         5 VIVIGgG~AG~eAA~~aAR~G~ktllit~~~~   36 (230)
T d2cula1           5 VLIVGAGFSGAETAFWLAQKGVRVGLLTQSLD   36 (230)
T ss_dssp             EEEECCSHHHHHHHHHHHHTTCCEEEEESCGG
T ss_pred             EEEECcCHHHHHHHHHHHHCCCcEEEEEeccc
Confidence            88999999999999999999999999987643

>d1guza1 c.2.1.5 (A:1-142) Malate dehydrogenase {Chlorobium vibrioforme [TaxId: 1098]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: LDH N-terminal domain-like
domain: Malate dehydrogenase
species: Chlorobium vibrioforme [TaxId: 1098]

Probab=84.00  E-value=1.2  Score=32.66  Aligned_cols=68  Identities=16%  Similarity=0.143  Sum_probs=43.1

Q ss_pred             EEEEEcCChHHHHHHHHHHHcCC--eEEEEeCCchhHHHHHHHc-------CCC-EEecCCCHHHHHHhcCCccEEEEcC
Q 018067          186 HVGVVGLGGLGHVAVKFAKAMGV--KVTVISTSPSKKSEAIERL-------GAD-SFLVSRDQDEMQAAMGTMDGIIDTV  255 (361)
Q Consensus       186 ~vlV~Gag~vG~~a~~la~~~g~--~vi~~~~~~~~~~~~~~~~-------g~~-~vv~~~~~~~~~~~~~g~d~vid~~  255 (361)
                      +|.|+|+|.+|...+..+...+.  ++..++..+++.......+       ... .+....+.    +...+.|+++-++
T Consensus         2 KI~IIGaG~VG~~la~~l~~~~l~~el~L~Di~~~~~~~~~~d~~~~~~~~~~~~~i~~~~~~----~~~~dadvvvita   77 (142)
T d1guza1           2 KITVIGAGNVGATTAFRLAEKQLARELVLLDVVEGIPQGKALDMYESGPVGLFDTKVTGSNDY----ADTANSDIVIITA   77 (142)
T ss_dssp             EEEEECCSHHHHHHHHHHHHTTCCSEEEEECSSSSHHHHHHHHHHTTHHHHTCCCEEEEESCG----GGGTTCSEEEECC
T ss_pred             EEEEECcCHHHHHHHHHHHhCCCCceEEEeccccccchhhhhhhhcccchhcccceEEecCCH----HHhcCCeEEEEEE
Confidence            58889999999999998888774  7888887776543332222       111 12111221    2235788988888


Q ss_pred             CC
Q 018067          256 SA  257 (361)
Q Consensus       256 g~  257 (361)
                      |.
T Consensus        78 g~   79 (142)
T d1guza1          78 GL   79 (142)
T ss_dssp             SC
T ss_pred             ec
Confidence            75

>d1onfa1 c.3.1.5 (A:1-153,A:271-376) Glutathione reductase {Plasmodium falciparum [TaxId: 5833]}

class: Alpha and beta proteins (a/b)
fold: FAD/NAD(P)-binding domain
superfamily: FAD/NAD(P)-binding domain
family: FAD/NAD-linked reductases, N-terminal and central domains
domain: Glutathione reductase
species: Plasmodium falciparum [TaxId: 5833]

Probab=83.82  E-value=0.58  Score=38.12  Aligned_cols=30  Identities=30%  Similarity=0.348  Sum_probs=27.8

Q ss_pred             EEEEcCChHHHHHHHHHHHcCCeEEEEeCC
Q 018067          187 VGVVGLGGLGHVAVKFAKAMGVKVTVISTS  216 (361)
Q Consensus       187 vlV~Gag~vG~~a~~la~~~g~~vi~~~~~  216 (361)
                      ++|+|+|+.|+.++..|...|.+|.++...
T Consensus         4 viVIG~G~aG~~aA~~aa~~G~~V~liE~~   33 (259)
T d1onfa1           4 LIVIGGGSGGMAAARRAARHNAKVALVEKS   33 (259)
T ss_dssp             EEEECCSHHHHHHHHHHHHTTCCEEEEESS
T ss_pred             EEEECCCHHHHHHHHHHHHCCCeEEEEecC
Confidence            788999999999999999999999999864

>d2gmha1 c.3.1.2 (A:4-236,A:336-482) Electron transfer flavoprotein-ubiquinone oxidoreductase, EFT-QO {Pig (Sus scrofa) [TaxId: 9823]}

class: Alpha and beta proteins (a/b)
fold: FAD/NAD(P)-binding domain
superfamily: FAD/NAD(P)-binding domain
family: FAD-linked reductases, N-terminal domain
domain: Electron transfer flavoprotein-ubiquinone oxidoreductase, EFT-QO
species: Pig (Sus scrofa) [TaxId: 9823]

Probab=83.80  E-value=0.51  Score=41.11  Aligned_cols=32  Identities=25%  Similarity=0.353  Sum_probs=26.7

Q ss_pred             EEEEEcCChHHHHHHHHHHH------cCCeEEEEeCCc
Q 018067          186 HVGVVGLGGLGHVAVKFAKA------MGVKVTVISTSP  217 (361)
Q Consensus       186 ~vlV~Gag~vG~~a~~la~~------~g~~vi~~~~~~  217 (361)
                      .|+|+|+|+.|++++..+..      .|.+|.++.+..
T Consensus        34 DViIVGgGPAGlsaA~~LA~l~~~~~~Gl~VlllEK~~   71 (380)
T d2gmha1          34 DVVIVGAGPAGLSAATRLKQLAAQHEKDLRVCLVEKAA   71 (380)
T ss_dssp             SEEEECCSHHHHHHHHHHHHHHHHTTCCCCEEEECSSS
T ss_pred             CEEEECCCHHHHHHHHHHHhhhhhhcCCCEEEEEcCCC
Confidence            48999999999988876654      699999999764

>d1susa1 c.66.1.1 (A:21-247) Caffeoyl-CoA O-methyltransferase {Alfalfa (Medicago sativa) [TaxId: 3879]}

class: Alpha and beta proteins (a/b)
fold: S-adenosyl-L-methionine-dependent methyltransferases
superfamily: S-adenosyl-L-methionine-dependent methyltransferases
family: COMT-like
domain: Caffeoyl-CoA O-methyltransferase
species: Alfalfa (Medicago sativa) [TaxId: 3879]

Probab=83.14  E-value=6.7  Score=30.92  Aligned_cols=98  Identities=17%  Similarity=0.131  Sum_probs=62.7

Q ss_pred             CCCCCEEEEEcCChHHHHHHHHHHHc--CCeEEEEeCCchhHHHH---HHHcCCCE---EecCCCHHHHHHh------cC
Q 018067          181 DKPGMHVGVVGLGGLGHVAVKFAKAM--GVKVTVISTSPSKKSEA---IERLGADS---FLVSRDQDEMQAA------MG  246 (361)
Q Consensus       181 ~~~g~~vlV~Gag~vG~~a~~la~~~--g~~vi~~~~~~~~~~~~---~~~~g~~~---vv~~~~~~~~~~~------~~  246 (361)
                      ....++||=+|.+ +|..++.+|+++  +.+++.+..+++....+   .++.|...   ++.....+.+.++      .+
T Consensus        57 ~~~~k~iLEiGT~-~GyStl~la~al~~~g~v~tie~~~~~~~~A~~~~~~~g~~~~i~~~~g~a~~~L~~l~~~~~~~~  135 (227)
T d1susa1          57 LINAKNTMEIGVY-TGYSLLATALAIPEDGKILAMDINKENYELGLPVIKKAGVDHKIDFREGPALPVLDEMIKDEKNHG  135 (227)
T ss_dssp             HHTCCEEEEECCG-GGHHHHHHHHHSCTTCEEEEEESCCHHHHHHHHHHHHTTCGGGEEEEESCHHHHHHHHHHCGGGTT
T ss_pred             hcCCCcEEEecch-hhhhHHHHHhhCCCCcEEEEEeccchhHHHHHHHHHHhccccceeeeehHHHHHHHHHHhccccCC
Confidence            3466789989874 478888888876  46899888887654332   23446532   2223334455554      23


Q ss_pred             CccEEEEcCCCc---ccHHHHHhccccCCEEEEecC
Q 018067          247 TMDGIIDTVSAV---HPLMPLIGLLKSQGKLVLVGA  279 (361)
Q Consensus       247 g~d~vid~~g~~---~~~~~~~~~l~~~G~~v~~g~  279 (361)
                      .+|.||-=+...   ..+..++..+++||.++.=..
T Consensus       136 ~fD~iFiDa~k~~y~~~~e~~~~ll~~gGiii~DNv  171 (227)
T d1susa1         136 SYDFIFVDADKDNYLNYHKRLIDLVKVGGVIGYDNT  171 (227)
T ss_dssp             CBSEEEECSCSTTHHHHHHHHHHHBCTTCCEEEETT
T ss_pred             ceeEEEeccchhhhHHHHHHHHhhcCCCcEEEEccC
Confidence            699996433332   346688999999999887543

>d1gtma1 c.2.1.7 (A:181-419) Glutamate dehydrogenase {Archaeon Pyrococcus furiosus [TaxId: 2261]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Aminoacid dehydrogenase-like, C-terminal domain
domain: Glutamate dehydrogenase
species: Archaeon Pyrococcus furiosus [TaxId: 2261]

Probab=83.12  E-value=1.4  Score=35.42  Aligned_cols=44  Identities=27%  Similarity=0.473  Sum_probs=33.5

Q ss_pred             HhhhcCCC-CCCCEEEEEcCChHHHHHHHHH-HHcCCeEEEEeCCc
Q 018067          174 PLRFYGLD-KPGMHVGVVGLGGLGHVAVKFA-KAMGVKVTVISTSP  217 (361)
Q Consensus       174 ~l~~~~~~-~~g~~vlV~Gag~vG~~a~~la-~~~g~~vi~~~~~~  217 (361)
                      +++..+.- -.|.+|+|.|.|.+|..+++++ +..|++|+.+.+..
T Consensus        21 ~~~~~g~~~l~g~~v~IqGfGnVG~~~a~~L~~~~G~kvv~vsD~~   66 (239)
T d1gtma1          21 AAKVLGWDTLKGKTIAIQGYGNAGYYLAKIMSEDFGMKVVAVSDSK   66 (239)
T ss_dssp             HHHHTTCSCSTTCEEEEECCSHHHHHHHHHHHHTTCCEEEEEECSS
T ss_pred             HHHHhCCCCcCCCEEEEECCCHHHHHHHHHHHHhcCcceeeccccc
Confidence            34444421 3789999999999999999877 46799998887653

>d2as0a2 c.66.1.51 (A:73-396) Hypothetical protein PH1915, middle and C-terminal domains {Archaeon Pyrococcus horikoshii [TaxId: 53953]}

class: Alpha and beta proteins (a/b)
fold: S-adenosyl-L-methionine-dependent methyltransferases
superfamily: S-adenosyl-L-methionine-dependent methyltransferases
family: hypothetical RNA methyltransferase
domain: Hypothetical protein PH1915, middle and C-terminal domains
species: Archaeon Pyrococcus horikoshii [TaxId: 53953]

Probab=82.93  E-value=1.7  Score=36.70  Aligned_cols=97  Identities=27%  Similarity=0.257  Sum_probs=57.7

Q ss_pred             CCCCCEEEEEcCChHHHHHHHHHHHcCC-eEEEEeCCchhHHHHH---HHcCCC---EEecCCCHHHHHHh---cCCccE
Q 018067          181 DKPGMHVGVVGLGGLGHVAVKFAKAMGV-KVTVISTSPSKKSEAI---ERLGAD---SFLVSRDQDEMQAA---MGTMDG  250 (361)
Q Consensus       181 ~~~g~~vlV~Gag~vG~~a~~la~~~g~-~vi~~~~~~~~~~~~~---~~~g~~---~vv~~~~~~~~~~~---~~g~d~  250 (361)
                      +++|++||=.++|. |..++.+|+. |+ +|+.++.+++....+.   +..|..   .++..+-.+.+..+   ...||+
T Consensus       143 ~~~g~~VLDl~~g~-G~~si~~a~~-ga~~V~~vD~s~~al~~a~~N~~~ngl~~~~~~~~~d~~~~~~~~~~~~~~fD~  220 (324)
T d2as0a2         143 VQPGDRVLDVFTYT-GGFAIHAAIA-GADEVIGIDKSPRAIETAKENAKLNGVEDRMKFIVGSAFEEMEKLQKKGEKFDI  220 (324)
T ss_dssp             CCTTCEEEETTCTT-THHHHHHHHT-TCSEEEEEESCHHHHHHHHHHHHHTTCGGGEEEEESCHHHHHHHHHHTTCCEEE
T ss_pred             cCCCCeeecccCcc-cchhhhhhhc-CCcEEEeecCCHHHHHHHHHHHHHcCCCccceeeechhhhhhHHHHhccCCCCc
Confidence            57899998876532 3333444444 66 8999999887654442   234542   22222223443333   247999


Q ss_pred             EEEcCCC---------------cccHHHHHhccccCCEEEEecC
Q 018067          251 IIDTVSA---------------VHPLMPLIGLLKSQGKLVLVGA  279 (361)
Q Consensus       251 vid~~g~---------------~~~~~~~~~~l~~~G~~v~~g~  279 (361)
                      |+--...               ...+..+.++|++||.++....
T Consensus       221 Vi~DpP~~~~~~~~~~~~~~~y~~l~~~a~~ll~pGG~lv~~s~  264 (324)
T d2as0a2         221 VVLDPPAFVQHEKDLKAGLRAYFNVNFAGLNLVKDGGILVTCSC  264 (324)
T ss_dssp             EEECCCCSCSSGGGHHHHHHHHHHHHHHHHTTEEEEEEEEEEEC
T ss_pred             hhcCCccccCCHHHHHHHHHHHHHHHHHHHHHcCCCcEEEEEeC
Confidence            9752221               1135667889999999998754

>d1mo9a1 c.3.1.5 (A:2-192,A:314-383) NADH-dependent 2-ketopropyl coenzyme M oxidoreductase/carboxylase {Xanthobacter sp., py2 [TaxId: 35809]}

class: Alpha and beta proteins (a/b)
fold: FAD/NAD(P)-binding domain
superfamily: FAD/NAD(P)-binding domain
family: FAD/NAD-linked reductases, N-terminal and central domains
domain: NADH-dependent 2-ketopropyl coenzyme M oxidoreductase/carboxylase
species: Xanthobacter sp., py2 [TaxId: 35809]

Probab=82.89  E-value=0.67  Score=37.79  Aligned_cols=32  Identities=22%  Similarity=0.428  Sum_probs=28.7

Q ss_pred             EEEEEcCChHHHHHHHHHHHcCCeEEEEeCCc
Q 018067          186 HVGVVGLGGLGHVAVKFAKAMGVKVTVISTSP  217 (361)
Q Consensus       186 ~vlV~Gag~vG~~a~~la~~~g~~vi~~~~~~  217 (361)
                      .++|+|+|+.|+.++..+..+|.+|.++...+
T Consensus        44 DvvVIGgG~aG~~aA~~~a~~G~kv~vve~~~   75 (261)
T d1mo9a1          44 DAIFIGGGAAGRFGSAYLRAMGGRQLIVDRWP   75 (261)
T ss_dssp             SEEEECCSHHHHHHHHHHHHTTCCEEEEESSS
T ss_pred             CEEEECCCHHHHHHHHHHHHCCCeEEEEeccC
Confidence            38889999999999999999999999998754

>d1fcja_ c.79.1.1 (A:) O-acetylserine sulfhydrylase (Cysteine synthase) {Salmonella typhimurium [TaxId: 90371]}

class: Alpha and beta proteins (a/b)
fold: Tryptophan synthase beta subunit-like PLP-dependent enzymes
superfamily: Tryptophan synthase beta subunit-like PLP-dependent enzymes
family: Tryptophan synthase beta subunit-like PLP-dependent enzymes
domain: O-acetylserine sulfhydrylase (Cysteine synthase)
species: Salmonella typhimurium [TaxId: 90371]

Probab=82.83  E-value=6.2  Score=32.34  Aligned_cols=55  Identities=27%  Similarity=0.337  Sum_probs=38.4

Q ss_pred             cCCCCCCCEEEEEcCChHHHHHHHHHHHcCCeEEEEe--CCchhHHHHHHHcCCCEE
Q 018067          178 YGLDKPGMHVGVVGLGGLGHVAVKFAKAMGVKVTVIS--TSPSKKSEAIERLGADSF  232 (361)
Q Consensus       178 ~~~~~~g~~vlV~Gag~vG~~a~~la~~~g~~vi~~~--~~~~~~~~~~~~~g~~~v  232 (361)
                      .+..+++.+|+..++|.-|.+++..++.+|.+.+++.  ..++......+.+|++.+
T Consensus        55 ~g~~~~~~~vv~assGn~g~a~A~~a~~~g~~~~i~~p~~~~~~k~~~~~~~ga~v~  111 (302)
T d1fcja_          55 RGVLKPGVELVEPTNGNTGIALAYVAAARGYKLTLTMPETMSIERRKLLKALGANLV  111 (302)
T ss_dssp             HTCCCTTCEEEEECSSHHHHHHHHHHHHHTCCEEEEEETTSCHHHHHHHHHTTCEEE
T ss_pred             cCCCCCCceEEEeccccchhHHHHHHHHhccCCceEEeecCcHHHHHHHHHhccceE
Confidence            3556777776667789999999999999998554444  334444555577777543

>d2hjsa1 c.2.1.3 (A:3-129,A:320-336) Usg-1 protein homolog PA3116 {Pseudomonas aeruginosa [TaxId: 287]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Glyceraldehyde-3-phosphate dehydrogenase-like, N-terminal domain
domain: Usg-1 protein homolog PA3116
species: Pseudomonas aeruginosa [TaxId: 287]

Probab=82.74  E-value=0.25  Score=36.78  Aligned_cols=90  Identities=13%  Similarity=0.129  Sum_probs=55.0

Q ss_pred             EEEEEcC-ChHHHHHHHHHHHc---CCeEEEEeCCchhHHHHHHHcCCCEEecCCCHHHHHHhcCCccEEEEcCCCcccH
Q 018067          186 HVGVVGL-GGLGHVAVKFAKAM---GVKVTVISTSPSKKSEAIERLGADSFLVSRDQDEMQAAMGTMDGIIDTVSAVHPL  261 (361)
Q Consensus       186 ~vlV~Ga-g~vG~~a~~la~~~---g~~vi~~~~~~~~~~~~~~~~g~~~vv~~~~~~~~~~~~~g~d~vid~~g~~~~~  261 (361)
                      +|.|+|+ |-+|+-.++++..+   ..++..+.+++.....+  .+...... ..+.+  .....+.|++|-+.++....
T Consensus         4 nVaIvGATGyvG~eli~lL~~~~hP~~~l~~~~s~~~~Gk~i--~~~~~~~~-~~~~~--~~~~~~~d~vf~a~p~~~s~   78 (144)
T d2hjsa1           4 NVAVVGATGSVGEALVGLLDERDFPLHRLHLLASAESAGQRM--GFAESSLR-VGDVD--SFDFSSVGLAFFAAAAEVSR   78 (144)
T ss_dssp             CEEEETTTSHHHHHHHHHHHHTTCCCSCEEEEECTTTTTCEE--EETTEEEE-CEEGG--GCCGGGCSEEEECSCHHHHH
T ss_pred             EEEEECCCCHHHHHHHHHHHhcCCCceEEEEEeecccCCcce--eeccccch-hccch--hhhhccceEEEecCCcchhh
Confidence            5899998 99999999999644   34676665553221111  01111110 00000  01123689999999987756


Q ss_pred             HHHHhccccCCEEEEecCC
Q 018067          262 MPLIGLLKSQGKLVLVGAP  280 (361)
Q Consensus       262 ~~~~~~l~~~G~~v~~g~~  280 (361)
                      ...-.....+.++++.+..
T Consensus        79 ~~~~~~~~~g~~VID~Ss~   97 (144)
T d2hjsa1          79 AHAERARAAGCSVIDLSGA   97 (144)
T ss_dssp             HHHHHHHHTTCEEEETTCT
T ss_pred             hhccccccCCceEEeechh
Confidence            6666777888899988753

>d1ne2a_ c.66.1.32 (A:) Hypothetical protein Ta1320 {Archaeon Thermoplasma acidophilum [TaxId: 2303]}

class: Alpha and beta proteins (a/b)
fold: S-adenosyl-L-methionine-dependent methyltransferases
superfamily: S-adenosyl-L-methionine-dependent methyltransferases
family: Ta1320-like
domain: Hypothetical protein Ta1320
species: Archaeon Thermoplasma acidophilum [TaxId: 2303]

Probab=82.72  E-value=2.6  Score=32.71  Aligned_cols=73  Identities=25%  Similarity=0.276  Sum_probs=42.6

Q ss_pred             hhhcCCCCCCCEEEEEcCChHHHHHHHHHHHcCC-eEEEEeCCchhHHHHHHHcCCCEEecCCCHHHHHHhcCCccEEEE
Q 018067          175 LRFYGLDKPGMHVGVVGLGGLGHVAVKFAKAMGV-KVTVISTSPSKKSEAIERLGADSFLVSRDQDEMQAAMGTMDGIID  253 (361)
Q Consensus       175 l~~~~~~~~g~~vlV~Gag~vG~~a~~la~~~g~-~vi~~~~~~~~~~~~~~~~g~~~vv~~~~~~~~~~~~~g~d~vid  253 (361)
                      +...+. -.|++||=+|+|. |.+++.++ ..|+ +|+.++.+++..+.+.+......++..+    +..+.+.+|+||-
T Consensus        41 ~~~~~d-l~Gk~VLDlGcGt-G~l~i~a~-~~ga~~V~~vDid~~a~~~ar~N~~~~~~~~~D----~~~l~~~fD~Vi~  113 (197)
T d1ne2a_          41 IYNDGN-IGGRSVIDAGTGN-GILACGSY-LLGAESVTAFDIDPDAIETAKRNCGGVNFMVAD----VSEISGKYDTWIM  113 (197)
T ss_dssp             HHHHTS-SBTSEEEEETCTT-CHHHHHHH-HTTBSEEEEEESCHHHHHHHHHHCTTSEEEECC----GGGCCCCEEEEEE
T ss_pred             HHHcCC-CCCCEEEEeCCCC-cHHHHHHH-HcCCCcccccccCHHHHHHHHHccccccEEEEe----hhhcCCcceEEEe
Confidence            334454 4689999998864 54444444 4565 7999988877655443333222333222    2234567998885


Q ss_pred             c
Q 018067          254 T  254 (361)
Q Consensus       254 ~  254 (361)
                      .
T Consensus       114 N  114 (197)
T d1ne2a_         114 N  114 (197)
T ss_dssp             C
T ss_pred             C
Confidence            4

>d1kewa_ c.2.1.2 (A:) dTDP-glucose 4,6-dehydratase (RmlB) {Streptococcus suis, serotype 2 [TaxId: 1307]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Tyrosine-dependent oxidoreductases
domain: dTDP-glucose 4,6-dehydratase (RmlB)
species: Streptococcus suis, serotype 2 [TaxId: 1307]

Probab=82.07  E-value=1  Score=38.58  Aligned_cols=71  Identities=13%  Similarity=0.149  Sum_probs=43.3

Q ss_pred             EEEEEcC-ChHHHHHHHHHHHcCCeEEE-EeCCch--hHHHHHHHcC-C-C-E--EecCCCHHHHHHhcC--CccEEEEc
Q 018067          186 HVGVVGL-GGLGHVAVKFAKAMGVKVTV-ISTSPS--KKSEAIERLG-A-D-S--FLVSRDQDEMQAAMG--TMDGIIDT  254 (361)
Q Consensus       186 ~vlV~Ga-g~vG~~a~~la~~~g~~vi~-~~~~~~--~~~~~~~~~g-~-~-~--vv~~~~~~~~~~~~~--g~d~vid~  254 (361)
                      +|||.|+ |-+|...+..+...|..+++ ++....  ....+ +.+. . . .  ..|-.+.+.+..+..  .+|+||++
T Consensus         2 kILItG~tGfIGs~l~~~L~~~g~~vv~~~d~~~~~~~~~~~-~~~~~~~~~~~~~~Dl~d~~~l~~~~~~~~~d~Vihl   80 (361)
T d1kewa_           2 KILITGGAGFIGSAVVRHIIKNTQDTVVNIDKLTYAGNLESL-SDISESNRYNFEHADICDSAEITRIFEQYQPDAVMHL   80 (361)
T ss_dssp             EEEEESTTSHHHHHHHHHHHHHCSCEEEEEECCCTTCCGGGG-TTTTTCTTEEEEECCTTCHHHHHHHHHHHCCSEEEEC
T ss_pred             EEEEECCCcHHHHHHHHHHHHCCCCEEEEEeCCCccccHHHH-HhhhhcCCcEEEEccCCCHHHHHHHHHhCCCCEEEEC
Confidence            6999997 99999999999888886544 443211  11111 1111 1 1 1  124455665555433  79999999


Q ss_pred             CCC
Q 018067          255 VSA  257 (361)
Q Consensus       255 ~g~  257 (361)
                      ++.
T Consensus        81 Aa~   83 (361)
T d1kewa_          81 AAE   83 (361)
T ss_dssp             CSC
T ss_pred             ccc
Confidence            864

>d1vkna1 c.2.1.3 (A:1-144,A:308-339) N-acetyl-gamma-glutamyl-phosphate reductase ArgC {Thermotoga maritima [TaxId: 2336]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Glyceraldehyde-3-phosphate dehydrogenase-like, N-terminal domain
domain: N-acetyl-gamma-glutamyl-phosphate reductase ArgC
species: Thermotoga maritima [TaxId: 2336]

Probab=81.88  E-value=3.5  Score=31.25  Aligned_cols=89  Identities=20%  Similarity=0.224  Sum_probs=52.4

Q ss_pred             EEEEEcC-ChHHHHHHHHHHHc-CCeEEEEeCCchhHHHHHHHcC---CCEEecCCCHHHHHHhcCCccEEEEcCCCccc
Q 018067          186 HVGVVGL-GGLGHVAVKFAKAM-GVKVTVISTSPSKKSEAIERLG---ADSFLVSRDQDEMQAAMGTMDGIIDTVSAVHP  260 (361)
Q Consensus       186 ~vlV~Ga-g~vG~~a~~la~~~-g~~vi~~~~~~~~~~~~~~~~g---~~~vv~~~~~~~~~~~~~g~d~vid~~g~~~~  260 (361)
                      +|.|+|+ |-+|+-.++++..+ ..++..+.+.+.....+.....   .+..+...+.+.   +....|++|-+.++...
T Consensus         3 kVaIvGATGyvG~eLirlL~~HP~~ei~~l~s~~~aG~~i~~~~p~~~~~~~~~~~~~~~---~~~~~dvvf~a~p~~~s   79 (176)
T d1vkna1           3 RAGIIGATGYTGLELVRLLKNHPEAKITYLSSRTYAGKKLEEIFPSTLENSILSEFDPEK---VSKNCDVLFTALPAGAS   79 (176)
T ss_dssp             EEEEESTTSHHHHHHHHHHHHCTTEEEEEEECSTTTTSBHHHHCGGGCCCCBCBCCCHHH---HHHHCSEEEECCSTTHH
T ss_pred             EEEEECCCcHHHHHHHHHHHhCCCceEEEeeccccCCCcccccCchhhccccccccCHhH---hccccceEEEccccHHH
Confidence            5889998 99999999999876 4466666554432222211111   122222333332   22369999999998763


Q ss_pred             HHHHHhccccCCEEEEecC
Q 018067          261 LMPLIGLLKSQGKLVLVGA  279 (361)
Q Consensus       261 ~~~~~~~l~~~G~~v~~g~  279 (361)
                      .... .. ..+-++|+.+.
T Consensus        80 ~~~~-~~-~~~~~VIDlSa   96 (176)
T d1vkna1          80 YDLV-RE-LKGVKIIDLGA   96 (176)
T ss_dssp             HHHH-TT-CCSCEEEESSS
T ss_pred             HHHH-Hh-hccceEEecCc
Confidence            3333 22 35667877754

>d1t2aa_ c.2.1.2 (A:) GDP-mannose 4,6-dehydratase {Human (Homo sapiens) [TaxId: 9606]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Tyrosine-dependent oxidoreductases
domain: GDP-mannose 4,6-dehydratase
species: Human (Homo sapiens) [TaxId: 9606]

Probab=81.74  E-value=0.76  Score=38.89  Aligned_cols=72  Identities=15%  Similarity=0.161  Sum_probs=44.5

Q ss_pred             EE-EEEcC-ChHHHHHHHHHHHcCCeEEEEeCCchh-----HHHHH----HHcCCC-EEe--cCCCHHHHHHhcC--Ccc
Q 018067          186 HV-GVVGL-GGLGHVAVKFAKAMGVKVTVISTSPSK-----KSEAI----ERLGAD-SFL--VSRDQDEMQAAMG--TMD  249 (361)
Q Consensus       186 ~v-lV~Ga-g~vG~~a~~la~~~g~~vi~~~~~~~~-----~~~~~----~~~g~~-~vv--~~~~~~~~~~~~~--g~d  249 (361)
                      +| ||+|+ |-+|...+..+...|.+|+++++....     ...+.    ...... ..+  |-.+.+.+..+..  .++
T Consensus         2 KI~LVTG~tGfIG~~l~~~Ll~~g~~V~~i~r~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~Dl~d~~~~~~~~~~~~~~   81 (347)
T d1t2aa_           2 NVALITGITGQDGSYLAEFLLEKGYEVHGIVRRSSSFNTGRIEHLYKNPQAHIEGNMKLHYGDLTDSTCLVKIINEVKPT   81 (347)
T ss_dssp             CEEEEETTTSHHHHHHHHHHHHTTCEEEEEECCCSSCCCTTTGGGC---------CEEEEECCTTCHHHHHHHHHHHCCS
T ss_pred             CEEEEecCCcHHHHHHHHHHHHCcCEEEEEECCCcccchhhHHHHhhchhhhccCCcEEEEeecCCchhhHHHHhhcccc
Confidence            57 99998 999999999998899999999985421     11110    011111 111  3445555555432  677


Q ss_pred             EEEEcCCC
Q 018067          250 GIIDTVSA  257 (361)
Q Consensus       250 ~vid~~g~  257 (361)
                      +++.+++.
T Consensus        82 ~v~~~~a~   89 (347)
T d1t2aa_          82 EIYNLGAQ   89 (347)
T ss_dssp             EEEECCSC
T ss_pred             eeeeeeec
Confidence            88877664

>d1p3ha_ b.35.1.1 (A:) Chaperonin-10 (GroES) {Mycobacterium tuberculosis [TaxId: 1773]}

class: All beta proteins
fold: GroES-like
superfamily: GroES-like
family: GroES
domain: Chaperonin-10 (GroES)
species: Mycobacterium tuberculosis [TaxId: 1773]

Probab=81.03  E-value=0.82  Score=31.35  Aligned_cols=24  Identities=29%  Similarity=0.253  Sum_probs=19.0

Q ss_pred             ccEEEEEeCCCCC----------CCCCCCEEEec
Q 018067           74 IVGVVTEVGSKVS----------KFKVGDKVGVG   97 (361)
Q Consensus        74 ~~G~Vv~vG~~v~----------~~~~GdrV~~~   97 (361)
                      ..|+|+++|++..          .+++||+|...
T Consensus        38 ~~G~VvavG~g~~~~~~~~~~~~~vk~GD~Vl~~   71 (99)
T d1p3ha_          38 QEGTVVAVGPGRWDEDGEKRIPLDVAEGDTVIYS   71 (99)
T ss_dssp             EEEEEEEECCCEECSSSSCEECCSCCTTCEEEEE
T ss_pred             eEEEEEEECCceEcCCCCEecCCeeecCCEEEEc
Confidence            4699999998742          37899999853

>d1obba1 c.2.1.5 (A:2-172) Alpha-glucosidase AglA {Thermotoga maritima [TaxId: 2336]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: LDH N-terminal domain-like
domain: Alpha-glucosidase AglA
species: Thermotoga maritima [TaxId: 2336]

Probab=80.91  E-value=3.5  Score=31.06  Aligned_cols=74  Identities=22%  Similarity=0.390  Sum_probs=44.3

Q ss_pred             CCCEEEEEcCChHHHHHHH---HHHH--c-CCeEEEEeCCchhHHHH-------HHHcCCC-EEecCCCHHHHHHhcCCc
Q 018067          183 PGMHVGVVGLGGLGHVAVK---FAKA--M-GVKVTVISTSPSKKSEA-------IERLGAD-SFLVSRDQDEMQAAMGTM  248 (361)
Q Consensus       183 ~g~~vlV~Gag~vG~~a~~---la~~--~-g~~vi~~~~~~~~~~~~-------~~~~g~~-~vv~~~~~~~~~~~~~g~  248 (361)
                      |+-+|.|+|+|.+|.....   +++.  . +.+++.++.++++.+..       ...++.. .+....+   .++.-.++
T Consensus         1 p~mKI~iIGaGsvg~t~~~~~~l~~~~~l~~~eivL~Did~~~~~~~~~~~~~~~~~~~~~~~i~~~td---~~eaL~da   77 (171)
T d1obba1           1 PSVKIGIIGAGSAVFSLRLVSDLCKTPGLSGSTVTLMDIDEERLDAILTIAKKYVEEVGADLKFEKTMN---LDDVIIDA   77 (171)
T ss_dssp             CCCEEEEETTTCHHHHHHHHHHHHTCGGGTTCEEEEECSCHHHHHHHHHHHHHHHHHTTCCCEEEEESC---HHHHHTTC
T ss_pred             CCcEEEEECCCHHHhHHHHHHHHHhccccCCCEEEEEeCCchHHHHHHHHHHHHHHhcCCCeEEEEeCC---hhhcccCC
Confidence            4568999999999855322   3332  2 34888888887654332       2234433 2222222   22344689


Q ss_pred             cEEEEcCCCcc
Q 018067          249 DGIIDTVSAVH  259 (361)
Q Consensus       249 d~vid~~g~~~  259 (361)
                      |+|+.+++...
T Consensus        78 d~Vv~~~~~g~   88 (171)
T d1obba1          78 DFVINTAMVGG   88 (171)
T ss_dssp             SEEEECCCTTH
T ss_pred             CeEeeeccccc
Confidence            99999988754

>d1z7wa1 c.79.1.1 (A:3-322) O-acetylserine sulfhydrylase (Cysteine synthase) {Thale cress (Arabidopsis thaliana) [TaxId: 3702]}

class: Alpha and beta proteins (a/b)
fold: Tryptophan synthase beta subunit-like PLP-dependent enzymes
superfamily: Tryptophan synthase beta subunit-like PLP-dependent enzymes
family: Tryptophan synthase beta subunit-like PLP-dependent enzymes
domain: O-acetylserine sulfhydrylase (Cysteine synthase)
species: Thale cress (Arabidopsis thaliana) [TaxId: 3702]

Probab=80.88  E-value=6.6  Score=32.63  Aligned_cols=56  Identities=25%  Similarity=0.278  Sum_probs=38.2

Q ss_pred             cCCCCCCCEEEE-EcCChHHHHHHHHHHHcCCeEEEEe--CCchhHHHHHHHcCCCEEe
Q 018067          178 YGLDKPGMHVGV-VGLGGLGHVAVKFAKAMGVKVTVIS--TSPSKKSEAIERLGADSFL  233 (361)
Q Consensus       178 ~~~~~~g~~vlV-~Gag~vG~~a~~la~~~g~~vi~~~--~~~~~~~~~~~~~g~~~vv  233 (361)
                      .+.++++...+| ..+|..|++.+..++.+|.+.+++.  ..+......++.+|++.++
T Consensus        58 ~g~~~~~~~~vv~aSsGN~g~a~A~~a~~~g~~~~iv~p~~~~~~k~~~i~~~Ga~vi~  116 (320)
T d1z7wa1          58 KGLIKPGESVLIEPTSGNTGVGLAFTAAAKGYKLIITMPASMSTERRIILLAFGVELVL  116 (320)
T ss_dssp             TTSCCTTTCEEEEECSSHHHHHHHHHHHHHTCEEEEEEETTSCHHHHHHHHHTTCEEEE
T ss_pred             cCCCCCCCceEEeeCCchHHHHHHHHHHhhccceEEeehhhhhhhhhhhhhccCcceEE
Confidence            454566655555 4569999999999999998655544  3344455556888886443

>d1qmga2 c.2.1.6 (A:82-307) Class II ketol-acid reductoisomerase (KARI) {Spinach (Spinacia oleracea) [TaxId: 3562]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: 6-phosphogluconate dehydrogenase-like, N-terminal domain
domain: Class II ketol-acid reductoisomerase (KARI)
species: Spinach (Spinacia oleracea) [TaxId: 3562]

Probab=80.59  E-value=3.5  Score=32.37  Aligned_cols=93  Identities=17%  Similarity=0.112  Sum_probs=61.1

Q ss_pred             CCCCEEEEEcCChHHHHHHHHHHHc------CCeEEEEeCCchhHHHHHHHcCCCEEecCCCHHHHHHhcCCccEEEEcC
Q 018067          182 KPGMHVGVVGLGGLGHVAVKFAKAM------GVKVTVISTSPSKKSEAIERLGADSFLVSRDQDEMQAAMGTMDGIIDTV  255 (361)
Q Consensus       182 ~~g~~vlV~Gag~vG~~a~~la~~~------g~~vi~~~~~~~~~~~~~~~~g~~~vv~~~~~~~~~~~~~g~d~vid~~  255 (361)
                      +.-++|.|+|-|.-|.+.++-+|..      |.+|++--+...+....+++-|....  ....-.+.++....|+|.-.+
T Consensus        42 kg~KkIaViGYGsQG~AhAlNLrDSG~~~~sgv~V~VGLr~gs~S~~kA~~dGf~v~--~~~v~~v~EAv~~ADiVmiLl  119 (226)
T d1qmga2          42 KGIKQIGVIGWGSQAPAQAQNLKDSLTEAKSDVVVKIGLRKGSNSFAEARAAGFSEE--NGTLGDMWETISGSDLVLLLI  119 (226)
T ss_dssp             TTCSEEEEECCSSHHHHHHHHHHHHHHHTTCCCEEEEEECTTCSCHHHHHHTTCCGG--GTCEEEHHHHHHTCSEEEECS
T ss_pred             cCCCEEEEEEeccHHHHHHHhChhhcccccCCceEEEEeCCCChhHHHHHHcCCccC--CCcccCHHHHHhhCCEEEEec
Confidence            4448899999999999999999984      56687776666555555577776410  000012334445799999888


Q ss_pred             CCcccHHHHH----hccccCCEEEEe
Q 018067          256 SAVHPLMPLI----GLLKSQGKLVLV  277 (361)
Q Consensus       256 g~~~~~~~~~----~~l~~~G~~v~~  277 (361)
                      ..+. ....+    ..|+++-.+..-
T Consensus       120 PDe~-Q~~vy~~I~p~Lk~G~~L~Fa  144 (226)
T d1qmga2         120 SDSA-QADNYEKVFSHMKPNSILGLS  144 (226)
T ss_dssp             CHHH-HHHHHHHHHHHSCTTCEEEES
T ss_pred             chHH-HHHHHHHHHHhcCCCceeeec
Confidence            8754 33333    467777776654

>d2gz1a1 c.2.1.3 (A:2-127,A:330-357) Aspartate beta-semialdehyde dehydrogenase {Streptococcus pneumoniae [TaxId: 1313]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Glyceraldehyde-3-phosphate dehydrogenase-like, N-terminal domain
domain: Aspartate beta-semialdehyde dehydrogenase
species: Streptococcus pneumoniae [TaxId: 1313]

Probab=80.32  E-value=0.38  Score=36.10  Aligned_cols=137  Identities=13%  Similarity=0.100  Sum_probs=74.4

Q ss_pred             CCEEEEEcC-ChHHHHHHHHHHHcCC---eEEEEeCCchhHHHHHHHcCCCEEecCCCHHHHHHhcCCccEEEEcCCCcc
Q 018067          184 GMHVGVVGL-GGLGHVAVKFAKAMGV---KVTVISTSPSKKSEAIERLGADSFLVSRDQDEMQAAMGTMDGIIDTVSAVH  259 (361)
Q Consensus       184 g~~vlV~Ga-g~vG~~a~~la~~~g~---~vi~~~~~~~~~~~~~~~~g~~~vv~~~~~~~~~~~~~g~d~vid~~g~~~  259 (361)
                      |-+|.|+|+ |-+|+-.++++..+..   ++..+++.+.....+  .+..........   ........|++|-+.+...
T Consensus         1 g~kVaIvGATGyvG~eLirlL~~H~fp~~~l~~~~s~~s~G~~~--~~~~~~~~~~~~---~~~~~~~~d~~f~~~~~~~   75 (154)
T d2gz1a1           1 GYTVAVVGATGAVGAQMIKMLEESTLPIDKIRYLASARSAGKSL--KFKDQDITIEET---TETAFEGVDIALFSAGSST   75 (154)
T ss_dssp             CEEEEEETTTSHHHHHHHHHHHTCCSCEEEEEEEECGGGTTCEE--EETTEEEEEEEC---CTTTTTTCSEEEECSCHHH
T ss_pred             CCEEEEECCCcHHHHHHHHHHHcCCCCceEEEEecccccccccc--cccCCccccccc---chhhhhhhhhhhhccCccc
Confidence            347999998 9999999999988743   444444332111000  000111000000   0112236899999999877


Q ss_pred             cHHHHHhccccCCEEEEecCCC---CCcccChHHH----HhCCcEEEecccCCHHHHHHHHHHHHcCCCceeE
Q 018067          260 PLMPLIGLLKSQGKLVLVGAPE---KPLELPAFSL----LMGRKIVGGSMIGGMKETQEMIDFAAKHNIRADI  325 (361)
Q Consensus       260 ~~~~~~~~l~~~G~~v~~g~~~---~~~~~~~~~~----~~~~~~i~g~~~~~~~~~~~~~~ll~~~~~~~~~  325 (361)
                      ......+....+-++++.+...   ..+.+..-++    +.+...++.+..=+.-.+.-+.-|.+++.+++..
T Consensus        76 s~~~~~~~~~~~~~VIDlSsdfR~~~~~~~~~pe~n~~~~~~~~~iIAnPgC~tt~i~~l~PL~~~~lik~~~  148 (154)
T d2gz1a1          76 SAKYAPYAVKAGVVVVDNTSYFRQNPDVPLVVPEVNAHALDAHNGIIACPNAAWNSVQIAETLHERGLVRPTA  148 (154)
T ss_dssp             HHHHHHHHHHTTCEEEECSSTTTTCTTSCBCCHHHHGGGGGGCCSEEECCCTHHHHHHHHHHHHHTTCCSCCS
T ss_pred             hhhHHhhhccccceehhcChhhhccCCcccccchhhHHHhcCcCceEECCCCHHHHHHHHHHHHHhcCCCccc
Confidence            6777777888899999998642   2222221111    2222233333221122244456778888877643